#transId geneId source chrom start end strand proteinId geneName transcriptName geneType transcriptType MGP_129S1SvImJ_T0005759.1 MGP_129S1SvImJ_G0004837.1 mouse_genomes_project 1 57005003 57020778 - BC055402 lincRNA lincRNA MGP_129S1SvImJ_T0020218.1 MGP_129S1SvImJ_G0016088.1 mouse_genomes_project 1 63421314 63444294 + MGP_129S1SvImJ_P0020218 protein_coding protein_coding MGP_129S1SvImJ_T0000748.1 MGP_129S1SvImJ_G0000685.1 mouse_genomes_project 1 167805945 167808209 + TEC TEC MGP_129S1SvImJ_T0099126.1 MGP_129S1SvImJ_G0037193.1 mouse_genomes_project 1 149354631 149354737 - Gm22681 snRNA snRNA MGP_129S1SvImJ_T0099056.1 MGP_129S1SvImJ_G0037123.1 mouse_genomes_project 1 127724 127834 + Gm26206 snRNA snRNA MGP_129S1SvImJ_T0021554.1 MGP_129S1SvImJ_G0016360.1 mouse_genomes_project 1 99547761 99569377 + MGP_129S1SvImJ_P0021554 Gin1 protein_coding protein_coding MGP_129S1SvImJ_T0021555.1 MGP_129S1SvImJ_G0016360.1 mouse_genomes_project 1 99547768 99556182 + MGP_129S1SvImJ_P0021555 Gin1 protein_coding protein_coding MGP_129S1SvImJ_T0021556.1 MGP_129S1SvImJ_G0016360.1 mouse_genomes_project 1 99547786 99570117 + MGP_129S1SvImJ_P0021556 Gin1 protein_coding protein_coding MGP_129S1SvImJ_T0021557.1 MGP_129S1SvImJ_G0016360.1 mouse_genomes_project 1 99547790 99548594 + Gin1 protein_coding processed_transcript MGP_129S1SvImJ_T0021558.1 MGP_129S1SvImJ_G0016360.1 mouse_genomes_project 1 99547799 99569414 + MGP_129S1SvImJ_P0021558 Gin1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021559.1 MGP_129S1SvImJ_G0016360.1 mouse_genomes_project 1 99551323 99554087 + Gin1 protein_coding retained_intron MGP_129S1SvImJ_T0021560.1 MGP_129S1SvImJ_G0016360.1 mouse_genomes_project 1 99555441 99559711 + MGP_129S1SvImJ_P0021560 Gin1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018746.1 MGP_129S1SvImJ_G0015810.1 mouse_genomes_project 1 1808645 1821243 - MGP_129S1SvImJ_P0018746 Mrpl15 protein_coding protein_coding MGP_129S1SvImJ_T0018747.1 MGP_129S1SvImJ_G0015810.1 mouse_genomes_project 1 1808650 1821272 - MGP_129S1SvImJ_P0018747 Mrpl15 protein_coding protein_coding MGP_129S1SvImJ_T0018748.1 MGP_129S1SvImJ_G0015810.1 mouse_genomes_project 1 1809875 1821231 - MGP_129S1SvImJ_P0018748 Mrpl15 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018749.1 MGP_129S1SvImJ_G0015810.1 mouse_genomes_project 1 1811816 1821272 - Mrpl15 protein_coding processed_transcript MGP_129S1SvImJ_T0018750.1 MGP_129S1SvImJ_G0015810.1 mouse_genomes_project 1 1815507 1820100 - Mrpl15 protein_coding retained_intron MGP_129S1SvImJ_T0018751.1 MGP_129S1SvImJ_G0015810.1 mouse_genomes_project 1 1816761 1821272 - MGP_129S1SvImJ_P0018751 Mrpl15 protein_coding protein_coding MGP_129S1SvImJ_T0018752.1 MGP_129S1SvImJ_G0015810.1 mouse_genomes_project 1 1819105 1821225 - Mrpl15 protein_coding retained_intron MGP_129S1SvImJ_T0020631.1 MGP_129S1SvImJ_G0016173.1 mouse_genomes_project 1 75730886 75733866 + Zfand2b protein_coding retained_intron MGP_129S1SvImJ_T0020632.1 MGP_129S1SvImJ_G0016173.1 mouse_genomes_project 1 75730886 75733870 + MGP_129S1SvImJ_P0020632 Zfand2b protein_coding protein_coding MGP_129S1SvImJ_T0020633.1 MGP_129S1SvImJ_G0016173.1 mouse_genomes_project 1 75730886 75732993 + MGP_129S1SvImJ_P0020633 Zfand2b protein_coding protein_coding MGP_129S1SvImJ_T0020634.1 MGP_129S1SvImJ_G0016173.1 mouse_genomes_project 1 75730895 75733866 + MGP_129S1SvImJ_P0020634 Zfand2b protein_coding protein_coding MGP_129S1SvImJ_T0020635.1 MGP_129S1SvImJ_G0016173.1 mouse_genomes_project 1 75730898 75732133 + Zfand2b protein_coding retained_intron MGP_129S1SvImJ_T0020636.1 MGP_129S1SvImJ_G0016173.1 mouse_genomes_project 1 75730906 75731872 + Zfand2b protein_coding retained_intron MGP_129S1SvImJ_T0020637.1 MGP_129S1SvImJ_G0016173.1 mouse_genomes_project 1 75730941 75732810 + Zfand2b protein_coding retained_intron MGP_129S1SvImJ_T0020638.1 MGP_129S1SvImJ_G0016173.1 mouse_genomes_project 1 75731018 75732928 + Zfand2b protein_coding retained_intron MGP_129S1SvImJ_T0020639.1 MGP_129S1SvImJ_G0016173.1 mouse_genomes_project 1 75731168 75733643 + MGP_129S1SvImJ_P0020639 Zfand2b protein_coding protein_coding MGP_129S1SvImJ_T0099147.1 MGP_129S1SvImJ_G0037214.1 mouse_genomes_project 1 191248808 191248906 - Gm23349 snRNA snRNA MGP_129S1SvImJ_T0098427.1 MGP_129S1SvImJ_G0036512.1 mouse_genomes_project 1 154464429 154464561 + n-R5s219 rRNA rRNA MGP_129S1SvImJ_T0009511.1 MGP_129S1SvImJ_G0007627.1 mouse_genomes_project 1 74428192 74428291 - Mir6351 miRNA miRNA MGP_129S1SvImJ_T0012037.1 MGP_129S1SvImJ_G0010126.1 mouse_genomes_project 1 49505492 49507384 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006014.1 MGP_129S1SvImJ_G0005041.1 mouse_genomes_project 1 181671514 181675619 + Gm36307 lincRNA lincRNA MGP_129S1SvImJ_T0022458.1 MGP_129S1SvImJ_G0016552.1 mouse_genomes_project 1 143487018 143506640 + MGP_129S1SvImJ_P0022458 Zbtb41 protein_coding protein_coding MGP_129S1SvImJ_T0022459.1 MGP_129S1SvImJ_G0016552.1 mouse_genomes_project 1 143487112 143517788 + MGP_129S1SvImJ_P0022459 Zbtb41 protein_coding protein_coding MGP_129S1SvImJ_T0022460.1 MGP_129S1SvImJ_G0016552.1 mouse_genomes_project 1 143488384 143513966 + MGP_129S1SvImJ_P0022460 Zbtb41 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0000558.1 MGP_129S1SvImJ_G0000497.1 mouse_genomes_project 1 81561349 81563205 - TEC TEC MGP_129S1SvImJ_T0012285.1 MGP_129S1SvImJ_G0010374.1 mouse_genomes_project 1 149583601 149584597 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012221.1 MGP_129S1SvImJ_G0010310.1 mouse_genomes_project 1 121173142 121174130 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005794.1 MGP_129S1SvImJ_G0004865.1 mouse_genomes_project 1 72350691 72375968 - Gm28818 lincRNA lincRNA MGP_129S1SvImJ_T0005795.1 MGP_129S1SvImJ_G0004865.1 mouse_genomes_project 1 72353365 72355549 - Gm28818 lincRNA lincRNA MGP_129S1SvImJ_T0012303.1 MGP_129S1SvImJ_G0010392.1 mouse_genomes_project 1 156896557 156897362 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020189.1 MGP_129S1SvImJ_G0016084.1 mouse_genomes_project 1 63080077 63221946 - MGP_129S1SvImJ_P0020189 Ino80d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020190.1 MGP_129S1SvImJ_G0016084.1 mouse_genomes_project 1 63183701 63237594 - MGP_129S1SvImJ_P0020190 Ino80d protein_coding protein_coding MGP_129S1SvImJ_T0020191.1 MGP_129S1SvImJ_G0016084.1 mouse_genomes_project 1 63185853 63189280 - Ino80d protein_coding retained_intron MGP_129S1SvImJ_T0020192.1 MGP_129S1SvImJ_G0016084.1 mouse_genomes_project 1 63187868 63237426 - MGP_129S1SvImJ_P0020192 Ino80d protein_coding protein_coding MGP_129S1SvImJ_T0020193.1 MGP_129S1SvImJ_G0016084.1 mouse_genomes_project 1 63187882 63237426 - MGP_129S1SvImJ_P0020193 Ino80d protein_coding protein_coding MGP_129S1SvImJ_T0098428.1 MGP_129S1SvImJ_G0036513.1 mouse_genomes_project 1 159193847 159193967 - n-R5s220 rRNA rRNA MGP_129S1SvImJ_T0009543.1 MGP_129S1SvImJ_G0007659.1 mouse_genomes_project 1 136429854 136429975 - Gm44300 miRNA miRNA MGP_129S1SvImJ_T0002957.1 MGP_129S1SvImJ_G0002781.1 mouse_genomes_project 1 169566217 169569100 - Gm16587 antisense antisense MGP_129S1SvImJ_T0005837.1 MGP_129S1SvImJ_G0004896.1 mouse_genomes_project 1 88477209 88481319 - Gm29374 lincRNA lincRNA MGP_129S1SvImJ_T0011946.1 MGP_129S1SvImJ_G0010035.1 mouse_genomes_project 1 21276005 21276994 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020383.1 MGP_129S1SvImJ_G0016122.1 mouse_genomes_project 1 70208646 70654728 + Spag16 protein_coding processed_transcript MGP_129S1SvImJ_T0020384.1 MGP_129S1SvImJ_G0016122.1 mouse_genomes_project 1 70208647 70654629 + Spag16 protein_coding processed_transcript MGP_129S1SvImJ_T0020385.1 MGP_129S1SvImJ_G0016122.1 mouse_genomes_project 1 70208664 71128235 + MGP_129S1SvImJ_P0020385 Spag16 protein_coding protein_coding MGP_129S1SvImJ_T0020386.1 MGP_129S1SvImJ_G0016122.1 mouse_genomes_project 1 70208668 70314189 + MGP_129S1SvImJ_P0020386 Spag16 protein_coding protein_coding MGP_129S1SvImJ_T0020387.1 MGP_129S1SvImJ_G0016122.1 mouse_genomes_project 1 70217382 70260865 + Spag16 protein_coding processed_transcript MGP_129S1SvImJ_T0020388.1 MGP_129S1SvImJ_G0016122.1 mouse_genomes_project 1 70333290 71128235 + Spag16 protein_coding processed_transcript MGP_129S1SvImJ_T0020389.1 MGP_129S1SvImJ_G0016122.1 mouse_genomes_project 1 70333317 70670136 + Spag16 protein_coding processed_transcript MGP_129S1SvImJ_T0012281.1 MGP_129S1SvImJ_G0010370.1 mouse_genomes_project 1 148582857 148584528 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002904.1 MGP_129S1SvImJ_G0002740.1 mouse_genomes_project 1 134686566 134690007 + Gm28913 antisense antisense MGP_129S1SvImJ_T0018863.1 MGP_129S1SvImJ_G0015830.1 mouse_genomes_project 1 7223878 7232592 - MGP_129S1SvImJ_P0018863 Tcf24 protein_coding protein_coding MGP_129S1SvImJ_T0018864.1 MGP_129S1SvImJ_G0015830.1 mouse_genomes_project 1 7223886 7226525 - MGP_129S1SvImJ_P0018864 Tcf24 protein_coding protein_coding MGP_129S1SvImJ_T0011979.1 MGP_129S1SvImJ_G0010068.1 mouse_genomes_project 1 33011332 33011755 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022190.1 MGP_129S1SvImJ_G0016498.1 mouse_genomes_project 1 137757607 137793942 + MGP_129S1SvImJ_P0022190 Chit1 protein_coding protein_coding MGP_129S1SvImJ_T0022191.1 MGP_129S1SvImJ_G0016498.1 mouse_genomes_project 1 137757607 137793942 + MGP_129S1SvImJ_P0022191 Chit1 protein_coding protein_coding MGP_129S1SvImJ_T0022192.1 MGP_129S1SvImJ_G0016498.1 mouse_genomes_project 1 137780983 137793941 + MGP_129S1SvImJ_P0022192 Chit1 protein_coding protein_coding MGP_129S1SvImJ_T0100388.1 MGP_129S1SvImJ_G0038455.1 mouse_genomes_project 1 166287776 166287837 + Gm23212 snoRNA snoRNA MGP_129S1SvImJ_T0022802.1 MGP_129S1SvImJ_G0016622.1 mouse_genomes_project 1 161253531 161270540 + MGP_129S1SvImJ_P0022802 Nphs2 protein_coding protein_coding MGP_129S1SvImJ_T0022803.1 MGP_129S1SvImJ_G0016622.1 mouse_genomes_project 1 161253847 161268936 + MGP_129S1SvImJ_P0022803 Nphs2 protein_coding protein_coding MGP_129S1SvImJ_T0099124.1 MGP_129S1SvImJ_G0037191.1 mouse_genomes_project 1 145494046 145494153 + Gm25457 snRNA snRNA MGP_129S1SvImJ_T0019331.1 MGP_129S1SvImJ_G0015924.1 mouse_genomes_project 1 35003491 35040614 + MGP_129S1SvImJ_P0019331 Cnnm4 protein_coding protein_coding MGP_129S1SvImJ_T0019332.1 MGP_129S1SvImJ_G0015924.1 mouse_genomes_project 1 35003867 35005239 + Cnnm4 protein_coding retained_intron MGP_129S1SvImJ_T0012119.1 MGP_129S1SvImJ_G0010208.1 mouse_genomes_project 1 76222631 76224313 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012286.1 MGP_129S1SvImJ_G0010375.1 mouse_genomes_project 1 149705823 149706216 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021146.1 MGP_129S1SvImJ_G0016267.1 mouse_genomes_project 1 88872026 88968118 + MGP_129S1SvImJ_P0021146 Neu2 protein_coding protein_coding MGP_129S1SvImJ_T0021147.1 MGP_129S1SvImJ_G0016267.1 mouse_genomes_project 1 88942675 88969286 + MGP_129S1SvImJ_P0021147 Neu2 protein_coding protein_coding MGP_129S1SvImJ_T0021148.1 MGP_129S1SvImJ_G0016267.1 mouse_genomes_project 1 88942675 88969269 + MGP_129S1SvImJ_P0021148 Neu2 protein_coding protein_coding MGP_129S1SvImJ_T0021149.1 MGP_129S1SvImJ_G0016267.1 mouse_genomes_project 1 88942694 88968013 + MGP_129S1SvImJ_P0021149 Neu2 protein_coding protein_coding MGP_129S1SvImJ_T0021150.1 MGP_129S1SvImJ_G0016267.1 mouse_genomes_project 1 88954098 88969293 + MGP_129S1SvImJ_P0021150 Neu2 protein_coding protein_coding MGP_129S1SvImJ_T0021151.1 MGP_129S1SvImJ_G0016267.1 mouse_genomes_project 1 88965999 88969269 + MGP_129S1SvImJ_P0021151 Neu2 protein_coding protein_coding MGP_129S1SvImJ_T0021152.1 MGP_129S1SvImJ_G0016267.1 mouse_genomes_project 1 88965999 88969275 + MGP_129S1SvImJ_P0021152 Neu2 protein_coding protein_coding MGP_129S1SvImJ_T0012040.1 MGP_129S1SvImJ_G0010129.1 mouse_genomes_project 1 50816665 50817690 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006000.1 MGP_129S1SvImJ_G0005028.1 mouse_genomes_project 1 171281554 171282842 - Gm36972 lincRNA lincRNA MGP_129S1SvImJ_T0021726.1 MGP_129S1SvImJ_G0016395.1 mouse_genomes_project 1 122216046 122252024 - MGP_129S1SvImJ_P0021726 Ralb protein_coding protein_coding MGP_129S1SvImJ_T0021727.1 MGP_129S1SvImJ_G0016395.1 mouse_genomes_project 1 122217886 122223805 - MGP_129S1SvImJ_P0021727 Ralb protein_coding protein_coding MGP_129S1SvImJ_T0021728.1 MGP_129S1SvImJ_G0016395.1 mouse_genomes_project 1 122226858 122252024 - Ralb protein_coding retained_intron MGP_129S1SvImJ_T0017076.1 MGP_129S1SvImJ_G0015117.1 mouse_genomes_project 1 151283631 151287621 - A230059L01Rik processed_transcript antisense MGP_129S1SvImJ_T0017077.1 MGP_129S1SvImJ_G0015117.1 mouse_genomes_project 1 151286431 151288708 - A230059L01Rik processed_transcript TEC MGP_129S1SvImJ_T0012229.1 MGP_129S1SvImJ_G0010318.1 mouse_genomes_project 1 122649752 122649982 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020428.1 MGP_129S1SvImJ_G0016130.1 mouse_genomes_project 1 72783062 72803251 + MGP_129S1SvImJ_P0020428 Tmem169 protein_coding protein_coding MGP_129S1SvImJ_T0020429.1 MGP_129S1SvImJ_G0016130.1 mouse_genomes_project 1 72783088 72800920 + MGP_129S1SvImJ_P0020429 Tmem169 protein_coding protein_coding MGP_129S1SvImJ_T0101574.1 MGP_129S1SvImJ_G0039640.1 mouse_genomes_project 1 35325829 35326139 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101575.1 MGP_129S1SvImJ_G0039640.1 mouse_genomes_project 1 35325984 35326841 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0012014.1 MGP_129S1SvImJ_G0010103.1 mouse_genomes_project 1 44199193 44200131 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021669.1 MGP_129S1SvImJ_G0016387.1 mouse_genomes_project 1 114262673 114268739 - Dsel protein_coding processed_transcript MGP_129S1SvImJ_T0021670.1 MGP_129S1SvImJ_G0016387.1 mouse_genomes_project 1 114262677 114268889 - MGP_129S1SvImJ_P0021670 Dsel protein_coding protein_coding MGP_129S1SvImJ_T0021671.1 MGP_129S1SvImJ_G0016387.1 mouse_genomes_project 1 114267294 114268854 - Dsel protein_coding processed_transcript MGP_129S1SvImJ_T0021672.1 MGP_129S1SvImJ_G0016387.1 mouse_genomes_project 1 114268066 114268851 - Dsel protein_coding processed_transcript MGP_129S1SvImJ_T0012013.1 MGP_129S1SvImJ_G0010102.1 mouse_genomes_project 1 43946732 43947477 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018832.1 MGP_129S1SvImJ_G0015824.1 mouse_genomes_project 1 6760578 6804855 + MGP_129S1SvImJ_P0018832 Adhfe1 protein_coding protein_coding MGP_129S1SvImJ_T0018833.1 MGP_129S1SvImJ_G0015824.1 mouse_genomes_project 1 6760685 6803786 + MGP_129S1SvImJ_P0018833 Adhfe1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018834.1 MGP_129S1SvImJ_G0015824.1 mouse_genomes_project 1 6760722 6767573 + MGP_129S1SvImJ_P0018834 Adhfe1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018835.1 MGP_129S1SvImJ_G0015824.1 mouse_genomes_project 1 6760737 6769452 + MGP_129S1SvImJ_P0018835 Adhfe1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018836.1 MGP_129S1SvImJ_G0015824.1 mouse_genomes_project 1 6760749 6807544 + MGP_129S1SvImJ_P0018836 Adhfe1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0102042.1 MGP_129S1SvImJ_G0039877.1 mouse_genomes_project 1 15799040 15811195 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0011998.1 MGP_129S1SvImJ_G0010087.1 mouse_genomes_project 1 39142497 39143167 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023790.1 MGP_129S1SvImJ_G0016854.1 mouse_genomes_project 1 184608677 184623384 - MGP_129S1SvImJ_P0023790 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023791.1 MGP_129S1SvImJ_G0016854.1 mouse_genomes_project 1 184608737 184616225 - MGP_129S1SvImJ_P0023791 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023792.1 MGP_129S1SvImJ_G0016854.1 mouse_genomes_project 1 184609223 184615011 - MGP_129S1SvImJ_P0023792 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018843.1 MGP_129S1SvImJ_G0015827.1 mouse_genomes_project 1 6955090 6988059 - MGP_129S1SvImJ_P0018843 Vcpip1 protein_coding protein_coding MGP_129S1SvImJ_T0005989.1 MGP_129S1SvImJ_G0005020.1 mouse_genomes_project 1 169955605 169967165 + Gm26685 lincRNA lincRNA MGP_129S1SvImJ_T0000808.1 MGP_129S1SvImJ_G0000743.1 mouse_genomes_project 1 193509570 193511451 - TEC TEC MGP_129S1SvImJ_T0023156.1 MGP_129S1SvImJ_G0016689.1 mouse_genomes_project 1 170648021 170668640 - MGP_129S1SvImJ_P0023156 Sft2d2 protein_coding protein_coding MGP_129S1SvImJ_T0023157.1 MGP_129S1SvImJ_G0016689.1 mouse_genomes_project 1 170649555 170668523 - MGP_129S1SvImJ_P0023157 Sft2d2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023158.1 MGP_129S1SvImJ_G0016689.1 mouse_genomes_project 1 170652922 170668519 - MGP_129S1SvImJ_P0023158 Sft2d2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0100307.1 MGP_129S1SvImJ_G0038374.1 mouse_genomes_project 1 7206182 7206269 - Snord87 snoRNA snoRNA MGP_129S1SvImJ_T0012079.1 MGP_129S1SvImJ_G0010168.1 mouse_genomes_project 1 61287258 61287960 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011941.1 MGP_129S1SvImJ_G0010030.1 mouse_genomes_project 1 19773171 19773723 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011270.1 MGP_129S1SvImJ_G0009386.1 mouse_genomes_project 1 73949788 73949942 + Gm27315 misc_RNA misc_RNA MGP_129S1SvImJ_T0009484.1 MGP_129S1SvImJ_G0007600.1 mouse_genomes_project 1 27448370 27448458 + Gm22679 miRNA miRNA MGP_129S1SvImJ_T0099104.1 MGP_129S1SvImJ_G0037171.1 mouse_genomes_project 1 108084762 108084869 + Gm26214 snRNA snRNA MGP_129S1SvImJ_T0002897.1 MGP_129S1SvImJ_G0002735.1 mouse_genomes_project 1 133796521 133821464 + antisense antisense MGP_129S1SvImJ_T0099059.1 MGP_129S1SvImJ_G0037126.1 mouse_genomes_project 1 1751488 1751591 - Gm25493 snRNA snRNA MGP_129S1SvImJ_T0005971.1 MGP_129S1SvImJ_G0005007.1 mouse_genomes_project 1 160451856 160459615 - Gm5532 lincRNA lincRNA MGP_129S1SvImJ_T0005972.1 MGP_129S1SvImJ_G0005007.1 mouse_genomes_project 1 160457515 160459647 - Gm5532 lincRNA lincRNA MGP_129S1SvImJ_T0023165.1 MGP_129S1SvImJ_G0016691.1 mouse_genomes_project 1 170777920 170803886 + MGP_129S1SvImJ_P0023165 Gpr161 protein_coding protein_coding MGP_129S1SvImJ_T0023166.1 MGP_129S1SvImJ_G0016691.1 mouse_genomes_project 1 170784723 170808818 + MGP_129S1SvImJ_P0023166 Gpr161 protein_coding protein_coding MGP_129S1SvImJ_T0022130.1 MGP_129S1SvImJ_G0016483.1 mouse_genomes_project 1 136845444 136866748 + MGP_129S1SvImJ_P0022130 protein_coding protein_coding MGP_129S1SvImJ_T0022131.1 MGP_129S1SvImJ_G0016483.1 mouse_genomes_project 1 136845444 136866782 + MGP_129S1SvImJ_P0022131 protein_coding protein_coding MGP_129S1SvImJ_T0022136.1 MGP_129S1SvImJ_G0016483.1 mouse_genomes_project 1 136861027 136866782 + MGP_129S1SvImJ_P0022136 protein_coding protein_coding MGP_129S1SvImJ_T0009528.1 MGP_129S1SvImJ_G0007644.1 mouse_genomes_project 1 94045769 94045829 - Mir6900 miRNA miRNA MGP_129S1SvImJ_T0099129.1 MGP_129S1SvImJ_G0037196.1 mouse_genomes_project 1 156607275 156607408 - Gm25279 snRNA snRNA MGP_129S1SvImJ_T0023627.1 MGP_129S1SvImJ_G0016794.1 mouse_genomes_project 1 178475707 178481535 - MGP_129S1SvImJ_P0023627 Fcrl6 protein_coding protein_coding MGP_129S1SvImJ_T0023628.1 MGP_129S1SvImJ_G0016794.1 mouse_genomes_project 1 178476668 178481531 - Fcrl6 protein_coding retained_intron MGP_129S1SvImJ_T0023629.1 MGP_129S1SvImJ_G0016794.1 mouse_genomes_project 1 178477107 178481535 - Fcrl6 protein_coding retained_intron MGP_129S1SvImJ_T0000383.1 MGP_129S1SvImJ_G0000325.1 mouse_genomes_project 1 1389297 1390781 - TEC TEC MGP_129S1SvImJ_T0024293.1 MGP_129S1SvImJ_G0016955.1 mouse_genomes_project 1 199912184 199923451 - MGP_129S1SvImJ_P0024293 Sertad4 protein_coding protein_coding MGP_129S1SvImJ_T0024294.1 MGP_129S1SvImJ_G0016955.1 mouse_genomes_project 1 199912185 199919444 - MGP_129S1SvImJ_P0024294 Sertad4 protein_coding protein_coding MGP_129S1SvImJ_T0024295.1 MGP_129S1SvImJ_G0016955.1 mouse_genomes_project 1 199914759 199919444 - MGP_129S1SvImJ_P0024295 Sertad4 protein_coding protein_coding MGP_129S1SvImJ_T0024296.1 MGP_129S1SvImJ_G0016955.1 mouse_genomes_project 1 199921896 199923181 - Sertad4 protein_coding processed_transcript MGP_129S1SvImJ_T0000619.1 MGP_129S1SvImJ_G0000558.1 mouse_genomes_project 1 124547239 124547988 + TEC TEC MGP_129S1SvImJ_T0002796.1 MGP_129S1SvImJ_G0002659.1 mouse_genomes_project 1 34605668 34606731 - Gm37335 antisense antisense MGP_129S1SvImJ_T0005987.1 MGP_129S1SvImJ_G0005018.1 mouse_genomes_project 1 169571325 169578961 - lincRNA lincRNA MGP_129S1SvImJ_T0002788.1 MGP_129S1SvImJ_G0002652.1 mouse_genomes_project 1 17970756 18008937 + 4930486I03Rik antisense antisense MGP_129S1SvImJ_T0019526.1 MGP_129S1SvImJ_G0015962.1 mouse_genomes_project 1 38566784 38567962 - MGP_129S1SvImJ_P0019526 Gm3646 protein_coding protein_coding MGP_129S1SvImJ_T0000762.1 MGP_129S1SvImJ_G0000699.1 mouse_genomes_project 1 174308035 174308644 - TEC TEC MGP_129S1SvImJ_T0024008.1 MGP_129S1SvImJ_G0016897.1 mouse_genomes_project 1 189407648 189409703 - MGP_129S1SvImJ_P0024008 Ccdc185 protein_coding protein_coding MGP_129S1SvImJ_T0012201.1 MGP_129S1SvImJ_G0010290.1 mouse_genomes_project 1 112748736 112749664 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000423.1 MGP_129S1SvImJ_G0000365.1 mouse_genomes_project 1 18873523 18875622 + TEC TEC MGP_129S1SvImJ_T0005897.1 MGP_129S1SvImJ_G0004947.1 mouse_genomes_project 1 122677541 122681275 + Gm28209 lincRNA lincRNA MGP_129S1SvImJ_T0022597.1 MGP_129S1SvImJ_G0016581.1 mouse_genomes_project 1 156156629 156172837 + Trmt1l protein_coding retained_intron MGP_129S1SvImJ_T0022598.1 MGP_129S1SvImJ_G0016581.1 mouse_genomes_project 1 156156629 156189943 + MGP_129S1SvImJ_P0022598 Trmt1l protein_coding protein_coding MGP_129S1SvImJ_T0022599.1 MGP_129S1SvImJ_G0016581.1 mouse_genomes_project 1 156156724 156165790 + Trmt1l protein_coding retained_intron MGP_129S1SvImJ_T0022600.1 MGP_129S1SvImJ_G0016581.1 mouse_genomes_project 1 156156729 156180377 + Trmt1l protein_coding retained_intron MGP_129S1SvImJ_T0022601.1 MGP_129S1SvImJ_G0016581.1 mouse_genomes_project 1 156156735 156158723 + Trmt1l protein_coding retained_intron MGP_129S1SvImJ_T0022602.1 MGP_129S1SvImJ_G0016581.1 mouse_genomes_project 1 156156754 156165790 + Trmt1l protein_coding retained_intron MGP_129S1SvImJ_T0022603.1 MGP_129S1SvImJ_G0016581.1 mouse_genomes_project 1 156156793 156189943 + MGP_129S1SvImJ_P0022603 Trmt1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0011991.1 MGP_129S1SvImJ_G0010080.1 mouse_genomes_project 1 36114838 36116629 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000634.1 MGP_129S1SvImJ_G0000573.1 mouse_genomes_project 1 130429816 130431210 + TEC TEC MGP_129S1SvImJ_T0000695.1 MGP_129S1SvImJ_G0000632.1 mouse_genomes_project 1 150933787 150938388 - TEC TEC MGP_129S1SvImJ_T0005700.1 MGP_129S1SvImJ_G0004799.1 mouse_genomes_project 1 34368350 34372113 + lincRNA lincRNA MGP_129S1SvImJ_T0022924.1 MGP_129S1SvImJ_G0016641.1 mouse_genomes_project 1 165385846 165391997 + MGP_129S1SvImJ_P0022924 Mrps14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022925.1 MGP_129S1SvImJ_G0016641.1 mouse_genomes_project 1 165385846 165393603 + MGP_129S1SvImJ_P0022925 Mrps14 protein_coding protein_coding MGP_129S1SvImJ_T0022926.1 MGP_129S1SvImJ_G0016641.1 mouse_genomes_project 1 165385934 165391989 + MGP_129S1SvImJ_P0022926 Mrps14 protein_coding protein_coding MGP_129S1SvImJ_T0012313.1 MGP_129S1SvImJ_G0010402.1 mouse_genomes_project 1 160806859 160807165 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000412.1 MGP_129S1SvImJ_G0000354.1 mouse_genomes_project 1 11243583 11245832 - TEC TEC MGP_129S1SvImJ_T0012233.1 MGP_129S1SvImJ_G0010322.1 mouse_genomes_project 1 124344325 124344544 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019633.1 MGP_129S1SvImJ_G0015985.1 mouse_genomes_project 1 43095585 43101570 - MGP_129S1SvImJ_P0019633 Gm8251 protein_coding protein_coding MGP_129S1SvImJ_T0005699.1 MGP_129S1SvImJ_G0004798.1 mouse_genomes_project 1 34288786 34293559 + Gm28415 lincRNA lincRNA MGP_129S1SvImJ_T0005923.1 MGP_129S1SvImJ_G0004968.1 mouse_genomes_project 1 135819796 135828136 + F730311O21Rik lincRNA lincRNA MGP_129S1SvImJ_T0000416.1 MGP_129S1SvImJ_G0000358.1 mouse_genomes_project 1 12815520 12817053 + TEC TEC MGP_129S1SvImJ_T0000394.1 MGP_129S1SvImJ_G0000336.1 mouse_genomes_project 1 6388722 6389774 - TEC TEC MGP_129S1SvImJ_T0012096.1 MGP_129S1SvImJ_G0010185.1 mouse_genomes_project 1 65746126 65746531 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021383.1 MGP_129S1SvImJ_G0016321.1 mouse_genomes_project 1 94188750 94189748 + MGP_129S1SvImJ_P0021383 Olfr1411 protein_coding protein_coding MGP_129S1SvImJ_T0000541.1 MGP_129S1SvImJ_G0000480.1 mouse_genomes_project 1 72294879 72298400 - TEC TEC MGP_129S1SvImJ_T0000717.1 MGP_129S1SvImJ_G0000654.1 mouse_genomes_project 1 161231134 161231779 - TEC TEC MGP_129S1SvImJ_T0005775.1 MGP_129S1SvImJ_G0004851.1 mouse_genomes_project 1 63245894 63248669 + Ino80dos lincRNA lincRNA MGP_129S1SvImJ_T0005776.1 MGP_129S1SvImJ_G0004851.1 mouse_genomes_project 1 63248179 63298679 + Ino80dos lincRNA lincRNA MGP_129S1SvImJ_T0005777.1 MGP_129S1SvImJ_G0004851.1 mouse_genomes_project 1 63248448 63296725 + Ino80dos lincRNA lincRNA MGP_129S1SvImJ_T0021209.1 MGP_129S1SvImJ_G0016280.1 mouse_genomes_project 1 89605074 89606125 - MGP_129S1SvImJ_P0021209 Dnajb3 protein_coding protein_coding MGP_129S1SvImJ_T0000750.1 MGP_129S1SvImJ_G0000687.1 mouse_genomes_project 1 168699840 168702114 - TEC TEC MGP_129S1SvImJ_T0019499.1 MGP_129S1SvImJ_G0015953.1 mouse_genomes_project 1 37644239 37655337 + MGP_129S1SvImJ_P0019499 Nms protein_coding protein_coding MGP_129S1SvImJ_T0019500.1 MGP_129S1SvImJ_G0015953.1 mouse_genomes_project 1 37644293 37653704 + MGP_129S1SvImJ_P0019500 Nms protein_coding protein_coding MGP_129S1SvImJ_T0006055.1 MGP_129S1SvImJ_G0005070.1 mouse_genomes_project 1 191799673 191807282 + Gm37662 lincRNA lincRNA MGP_129S1SvImJ_T0006056.1 MGP_129S1SvImJ_G0005071.1 mouse_genomes_project 1 192089691 192095143 - lincRNA lincRNA MGP_129S1SvImJ_T0005910.1 MGP_129S1SvImJ_G0004956.1 mouse_genomes_project 1 124174044 124180563 - 2210011K15Rik lincRNA lincRNA MGP_129S1SvImJ_T0022356.1 MGP_129S1SvImJ_G0016532.1 mouse_genomes_project 1 139743100 139752715 - MGP_129S1SvImJ_P0022356 Igfn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022357.1 MGP_129S1SvImJ_G0016532.1 mouse_genomes_project 1 139743107 139800247 - MGP_129S1SvImJ_P0022357 Igfn1 protein_coding protein_coding MGP_129S1SvImJ_T0022358.1 MGP_129S1SvImJ_G0016532.1 mouse_genomes_project 1 139743546 139776415 - MGP_129S1SvImJ_P0022358 Igfn1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0022359.1 MGP_129S1SvImJ_G0016532.1 mouse_genomes_project 1 139744120 139773849 - MGP_129S1SvImJ_P0022359 Igfn1 protein_coding protein_coding MGP_129S1SvImJ_T0012099.1 MGP_129S1SvImJ_G0010188.1 mouse_genomes_project 1 66282972 66283310 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022299.1 MGP_129S1SvImJ_G0016524.1 mouse_genomes_project 1 139147272 139198498 - MGP_129S1SvImJ_P0022299 Ipo9 protein_coding protein_coding MGP_129S1SvImJ_T0022300.1 MGP_129S1SvImJ_G0016524.1 mouse_genomes_project 1 139149431 139198457 - MGP_129S1SvImJ_P0022300 Ipo9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022301.1 MGP_129S1SvImJ_G0016524.1 mouse_genomes_project 1 139149431 139198490 - MGP_129S1SvImJ_P0022301 Ipo9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022302.1 MGP_129S1SvImJ_G0016524.1 mouse_genomes_project 1 139150074 139153566 - MGP_129S1SvImJ_P0022302 Ipo9 protein_coding protein_coding MGP_129S1SvImJ_T0022303.1 MGP_129S1SvImJ_G0016524.1 mouse_genomes_project 1 139150762 139153521 - Ipo9 protein_coding retained_intron MGP_129S1SvImJ_T0022304.1 MGP_129S1SvImJ_G0016524.1 mouse_genomes_project 1 139151244 139153672 - Ipo9 protein_coding retained_intron MGP_129S1SvImJ_T0022305.1 MGP_129S1SvImJ_G0016524.1 mouse_genomes_project 1 139151347 139152521 - Ipo9 protein_coding retained_intron MGP_129S1SvImJ_T0022306.1 MGP_129S1SvImJ_G0016524.1 mouse_genomes_project 1 139153587 139154765 - Ipo9 protein_coding retained_intron MGP_129S1SvImJ_T0022307.1 MGP_129S1SvImJ_G0016524.1 mouse_genomes_project 1 139154408 139169968 - Ipo9 protein_coding processed_transcript MGP_129S1SvImJ_T0022308.1 MGP_129S1SvImJ_G0016524.1 mouse_genomes_project 1 139159076 139170059 - Ipo9 protein_coding retained_intron MGP_129S1SvImJ_T0022309.1 MGP_129S1SvImJ_G0016524.1 mouse_genomes_project 1 139168944 139198432 - MGP_129S1SvImJ_P0022309 Ipo9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022310.1 MGP_129S1SvImJ_G0016524.1 mouse_genomes_project 1 139172618 139173738 - Ipo9 protein_coding retained_intron MGP_129S1SvImJ_T0022311.1 MGP_129S1SvImJ_G0016524.1 mouse_genomes_project 1 139173068 139187096 - Ipo9 protein_coding retained_intron MGP_129S1SvImJ_T0022312.1 MGP_129S1SvImJ_G0016524.1 mouse_genomes_project 1 139174454 139198418 - MGP_129S1SvImJ_P0022312 Ipo9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023087.1 MGP_129S1SvImJ_G0016670.1 mouse_genomes_project 1 168639416 168706743 - MGP_129S1SvImJ_P0023087 Prrx1 protein_coding protein_coding MGP_129S1SvImJ_T0023088.1 MGP_129S1SvImJ_G0016670.1 mouse_genomes_project 1 168639416 168706705 - MGP_129S1SvImJ_P0023088 Prrx1 protein_coding protein_coding MGP_129S1SvImJ_T0023089.1 MGP_129S1SvImJ_G0016670.1 mouse_genomes_project 1 168641876 168682893 - Prrx1 protein_coding processed_transcript MGP_129S1SvImJ_T0023090.1 MGP_129S1SvImJ_G0016670.1 mouse_genomes_project 1 168647147 168706701 - MGP_129S1SvImJ_P0023090 Prrx1 protein_coding protein_coding MGP_129S1SvImJ_T0023091.1 MGP_129S1SvImJ_G0016670.1 mouse_genomes_project 1 168676477 168706704 - Prrx1 protein_coding retained_intron MGP_129S1SvImJ_T0024038.1 MGP_129S1SvImJ_G0016903.1 mouse_genomes_project 1 189973008 189998828 - MGP_129S1SvImJ_P0024038 protein_coding protein_coding MGP_129S1SvImJ_T0024039.1 MGP_129S1SvImJ_G0016903.1 mouse_genomes_project 1 189973110 189982268 - MGP_129S1SvImJ_P0024039 protein_coding protein_coding MGP_129S1SvImJ_T0024040.1 MGP_129S1SvImJ_G0016903.1 mouse_genomes_project 1 189973623 190022929 - MGP_129S1SvImJ_P0024040 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0024041.1 MGP_129S1SvImJ_G0016903.1 mouse_genomes_project 1 189983260 189987969 - MGP_129S1SvImJ_P0024041 protein_coding protein_coding MGP_129S1SvImJ_T0024042.1 MGP_129S1SvImJ_G0016903.1 mouse_genomes_project 1 189997263 190004640 - protein_coding retained_intron MGP_129S1SvImJ_T0024043.1 MGP_129S1SvImJ_G0016903.1 mouse_genomes_project 1 189997759 190004618 - MGP_129S1SvImJ_P0024043 protein_coding protein_coding MGP_129S1SvImJ_T0024044.1 MGP_129S1SvImJ_G0016903.1 mouse_genomes_project 1 190011997 190022953 - MGP_129S1SvImJ_P0024044 protein_coding protein_coding MGP_129S1SvImJ_T0005966.1 MGP_129S1SvImJ_G0005003.1 mouse_genomes_project 1 159129819 159138889 - lincRNA lincRNA MGP_129S1SvImJ_T0019093.1 MGP_129S1SvImJ_G0015881.1 mouse_genomes_project 1 19082444 19703656 - MGP_129S1SvImJ_P0019093 Kcnq5 protein_coding protein_coding MGP_129S1SvImJ_T0019094.1 MGP_129S1SvImJ_G0015881.1 mouse_genomes_project 1 19082449 19704017 - MGP_129S1SvImJ_P0019094 Kcnq5 protein_coding protein_coding MGP_129S1SvImJ_T0019095.1 MGP_129S1SvImJ_G0015881.1 mouse_genomes_project 1 19086192 19703656 - MGP_129S1SvImJ_P0019095 Kcnq5 protein_coding protein_coding MGP_129S1SvImJ_T0019096.1 MGP_129S1SvImJ_G0015881.1 mouse_genomes_project 1 19086192 19703656 - MGP_129S1SvImJ_P0019096 Kcnq5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019097.1 MGP_129S1SvImJ_G0015881.1 mouse_genomes_project 1 19086192 19703656 - MGP_129S1SvImJ_P0019097 Kcnq5 protein_coding protein_coding MGP_129S1SvImJ_T0019098.1 MGP_129S1SvImJ_G0015881.1 mouse_genomes_project 1 19163117 19703740 - Kcnq5 protein_coding retained_intron MGP_129S1SvImJ_T0019099.1 MGP_129S1SvImJ_G0015881.1 mouse_genomes_project 1 19208644 19319957 - MGP_129S1SvImJ_P0019099 Kcnq5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0019100.1 MGP_129S1SvImJ_G0015881.1 mouse_genomes_project 1 19298655 19592494 - Kcnq5 protein_coding processed_transcript MGP_129S1SvImJ_T0022207.1 MGP_129S1SvImJ_G0016502.1 mouse_genomes_project 1 137938128 137940688 + MGP_129S1SvImJ_P0022207 Myog protein_coding protein_coding MGP_129S1SvImJ_T0021088.1 MGP_129S1SvImJ_G0016255.1 mouse_genomes_project 1 88430337 88433942 - MGP_129S1SvImJ_P0021088 Alpi protein_coding protein_coding MGP_129S1SvImJ_T0022282.1 MGP_129S1SvImJ_G0016520.1 mouse_genomes_project 1 139017030 139040028 - MGP_129S1SvImJ_P0022282 Rnpep protein_coding protein_coding MGP_129S1SvImJ_T0022283.1 MGP_129S1SvImJ_G0016520.1 mouse_genomes_project 1 139017030 139040028 - MGP_129S1SvImJ_P0022283 Rnpep protein_coding protein_coding MGP_129S1SvImJ_T0022284.1 MGP_129S1SvImJ_G0016520.1 mouse_genomes_project 1 139019523 139021734 - Rnpep protein_coding retained_intron MGP_129S1SvImJ_T0022285.1 MGP_129S1SvImJ_G0016520.1 mouse_genomes_project 1 139021360 139025795 - Rnpep protein_coding processed_transcript MGP_129S1SvImJ_T0022286.1 MGP_129S1SvImJ_G0016520.1 mouse_genomes_project 1 139025706 139028904 - Rnpep protein_coding processed_transcript MGP_129S1SvImJ_T0022287.1 MGP_129S1SvImJ_G0016520.1 mouse_genomes_project 1 139025708 139027090 - Rnpep protein_coding retained_intron MGP_129S1SvImJ_T0022288.1 MGP_129S1SvImJ_G0016520.1 mouse_genomes_project 1 139030010 139033366 - Rnpep protein_coding retained_intron MGP_129S1SvImJ_T0022289.1 MGP_129S1SvImJ_G0016520.1 mouse_genomes_project 1 139033296 139035062 - Rnpep protein_coding retained_intron MGP_129S1SvImJ_T0022290.1 MGP_129S1SvImJ_G0016520.1 mouse_genomes_project 1 139033591 139035865 - Rnpep protein_coding retained_intron MGP_129S1SvImJ_T0012084.1 MGP_129S1SvImJ_G0010173.1 mouse_genomes_project 1 62782330 62783209 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012047.1 MGP_129S1SvImJ_G0010136.1 mouse_genomes_project 1 52402921 52403783 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005877.1 MGP_129S1SvImJ_G0004932.1 mouse_genomes_project 1 107207923 107218770 + Gm29012 lincRNA lincRNA MGP_129S1SvImJ_T0022851.1 MGP_129S1SvImJ_G0016629.1 mouse_genomes_project 1 161820072 161844145 + MGP_129S1SvImJ_P0022851 Angptl1 protein_coding protein_coding MGP_129S1SvImJ_T0022852.1 MGP_129S1SvImJ_G0016629.1 mouse_genomes_project 1 161820456 161827130 + MGP_129S1SvImJ_P0022852 Angptl1 protein_coding protein_coding MGP_129S1SvImJ_T0023354.1 MGP_129S1SvImJ_G0016737.1 mouse_genomes_project 1 176668918 176681201 - MGP_129S1SvImJ_P0023354 Fcrla protein_coding protein_coding MGP_129S1SvImJ_T0023355.1 MGP_129S1SvImJ_G0016737.1 mouse_genomes_project 1 176669217 176673191 - MGP_129S1SvImJ_P0023355 Fcrla protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023356.1 MGP_129S1SvImJ_G0016737.1 mouse_genomes_project 1 176669224 176681201 - MGP_129S1SvImJ_P0023356 Fcrla protein_coding protein_coding MGP_129S1SvImJ_T0023357.1 MGP_129S1SvImJ_G0016737.1 mouse_genomes_project 1 176671706 176681173 - MGP_129S1SvImJ_P0023357 Fcrla protein_coding protein_coding MGP_129S1SvImJ_T0023358.1 MGP_129S1SvImJ_G0016737.1 mouse_genomes_project 1 176672419 176681178 - MGP_129S1SvImJ_P0023358 Fcrla protein_coding protein_coding MGP_129S1SvImJ_T0023359.1 MGP_129S1SvImJ_G0016737.1 mouse_genomes_project 1 176672439 176681152 - Fcrla protein_coding processed_transcript MGP_129S1SvImJ_T0000656.1 MGP_129S1SvImJ_G0000595.1 mouse_genomes_project 1 136449617 136451430 - TEC TEC MGP_129S1SvImJ_T0099070.1 MGP_129S1SvImJ_G0037137.1 mouse_genomes_project 1 30513810 30513917 - Gm25814 snRNA snRNA MGP_129S1SvImJ_T0000652.1 MGP_129S1SvImJ_G0000591.1 mouse_genomes_project 1 134758915 134760297 - TEC TEC MGP_129S1SvImJ_T0009513.1 MGP_129S1SvImJ_G0007629.1 mouse_genomes_project 1 74992912 74992997 + Mir26b miRNA miRNA MGP_129S1SvImJ_T0022684.1 MGP_129S1SvImJ_G0016598.1 mouse_genomes_project 1 158334822 158385052 - MGP_129S1SvImJ_P0022684 Npl protein_coding protein_coding MGP_129S1SvImJ_T0022685.1 MGP_129S1SvImJ_G0016598.1 mouse_genomes_project 1 158383428 158384718 - Npl protein_coding retained_intron MGP_129S1SvImJ_T0000804.1 MGP_129S1SvImJ_G0000739.1 mouse_genomes_project 1 192050946 192053379 + TEC TEC MGP_129S1SvImJ_T0019704.1 MGP_129S1SvImJ_G0015998.1 mouse_genomes_project 1 45666244 45699092 + protein_coding processed_transcript MGP_129S1SvImJ_T0021002.1 MGP_129S1SvImJ_G0016235.1 mouse_genomes_project 1 87003531 87063582 + MGP_129S1SvImJ_P0021002 Cab39 protein_coding protein_coding MGP_129S1SvImJ_T0021003.1 MGP_129S1SvImJ_G0016235.1 mouse_genomes_project 1 87003631 87029334 + MGP_129S1SvImJ_P0021003 Cab39 protein_coding protein_coding MGP_129S1SvImJ_T0021004.1 MGP_129S1SvImJ_G0016235.1 mouse_genomes_project 1 87004551 87049326 + MGP_129S1SvImJ_P0021004 Cab39 protein_coding protein_coding MGP_129S1SvImJ_T0021005.1 MGP_129S1SvImJ_G0016235.1 mouse_genomes_project 1 87004594 87062371 + MGP_129S1SvImJ_P0021005 Cab39 protein_coding protein_coding MGP_129S1SvImJ_T0021006.1 MGP_129S1SvImJ_G0016235.1 mouse_genomes_project 1 87055086 87058077 + Cab39 protein_coding retained_intron MGP_129S1SvImJ_T0021933.1 MGP_129S1SvImJ_G0016439.1 mouse_genomes_project 1 134109609 134120222 + MGP_129S1SvImJ_P0021933 Yod1 protein_coding protein_coding MGP_129S1SvImJ_T0100379.1 MGP_129S1SvImJ_G0038446.1 mouse_genomes_project 1 152919859 152919988 - Gm22966 snoRNA snoRNA MGP_129S1SvImJ_T0012025.1 MGP_129S1SvImJ_G0010114.1 mouse_genomes_project 1 46840353 46841684 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005738.1 MGP_129S1SvImJ_G0004821.1 mouse_genomes_project 1 46172014 46172962 - Gm28151 lincRNA lincRNA MGP_129S1SvImJ_T0022766.1 MGP_129S1SvImJ_G0016616.1 mouse_genomes_project 1 160716563 160719951 - Qsox1 protein_coding retained_intron MGP_129S1SvImJ_T0022767.1 MGP_129S1SvImJ_G0016616.1 mouse_genomes_project 1 160718692 160753529 - MGP_129S1SvImJ_P0022767 Qsox1 protein_coding protein_coding MGP_129S1SvImJ_T0022768.1 MGP_129S1SvImJ_G0016616.1 mouse_genomes_project 1 160718693 160753491 - MGP_129S1SvImJ_P0022768 Qsox1 protein_coding protein_coding MGP_129S1SvImJ_T0022769.1 MGP_129S1SvImJ_G0016616.1 mouse_genomes_project 1 160718696 160753484 - MGP_129S1SvImJ_P0022769 Qsox1 protein_coding protein_coding MGP_129S1SvImJ_T0022770.1 MGP_129S1SvImJ_G0016616.1 mouse_genomes_project 1 160720446 160722522 - Qsox1 protein_coding processed_transcript MGP_129S1SvImJ_T0022771.1 MGP_129S1SvImJ_G0016616.1 mouse_genomes_project 1 160734751 160753460 - Qsox1 protein_coding retained_intron MGP_129S1SvImJ_T0022772.1 MGP_129S1SvImJ_G0016616.1 mouse_genomes_project 1 160734925 160736000 - Qsox1 protein_coding retained_intron MGP_129S1SvImJ_T0022773.1 MGP_129S1SvImJ_G0016616.1 mouse_genomes_project 1 160742049 160753478 - Qsox1 protein_coding retained_intron MGP_129S1SvImJ_T0012227.1 MGP_129S1SvImJ_G0010316.1 mouse_genomes_project 1 122564392 122565102 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000617.1 MGP_129S1SvImJ_G0000556.1 mouse_genomes_project 1 124118119 124118805 - TEC TEC MGP_129S1SvImJ_T0022479.1 MGP_129S1SvImJ_G0016559.1 mouse_genomes_project 1 144390110 144788000 + MGP_129S1SvImJ_P0022479 Kcnt2 protein_coding protein_coding MGP_129S1SvImJ_T0022480.1 MGP_129S1SvImJ_G0016559.1 mouse_genomes_project 1 144390147 144784761 + MGP_129S1SvImJ_P0022480 Kcnt2 protein_coding protein_coding MGP_129S1SvImJ_T0022481.1 MGP_129S1SvImJ_G0016559.1 mouse_genomes_project 1 144390159 144785058 + MGP_129S1SvImJ_P0022481 Kcnt2 protein_coding protein_coding MGP_129S1SvImJ_T0022482.1 MGP_129S1SvImJ_G0016559.1 mouse_genomes_project 1 144613522 144614530 + Kcnt2 protein_coding retained_intron MGP_129S1SvImJ_T0022483.1 MGP_129S1SvImJ_G0016559.1 mouse_genomes_project 1 144613687 144695665 + Kcnt2 protein_coding processed_transcript MGP_129S1SvImJ_T0022484.1 MGP_129S1SvImJ_G0016559.1 mouse_genomes_project 1 144688315 144749329 + MGP_129S1SvImJ_P0022484 Kcnt2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0000713.1 MGP_129S1SvImJ_G0000650.1 mouse_genomes_project 1 160729667 160729902 + TEC TEC MGP_129S1SvImJ_T0009553.1 MGP_129S1SvImJ_G0007669.1 mouse_genomes_project 1 160236526 160236650 + Gm22569 miRNA miRNA MGP_129S1SvImJ_T0099062.1 MGP_129S1SvImJ_G0037129.1 mouse_genomes_project 1 7274655 7274759 - Gm24674 snRNA snRNA MGP_129S1SvImJ_T0017019.1 MGP_129S1SvImJ_G0015096.1 mouse_genomes_project 1 43131568 43150655 - Gm29247 processed_transcript processed_transcript MGP_129S1SvImJ_T0017020.1 MGP_129S1SvImJ_G0015096.1 mouse_genomes_project 1 43131669 43151400 - Gm29247 processed_transcript processed_transcript MGP_129S1SvImJ_T0012361.1 MGP_129S1SvImJ_G0010450.1 mouse_genomes_project 1 184534528 184535431 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012150.1 MGP_129S1SvImJ_G0010239.1 mouse_genomes_project 1 90693853 90694653 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000385.1 MGP_129S1SvImJ_G0000327.1 mouse_genomes_project 1 1945630 1946741 - TEC TEC MGP_129S1SvImJ_T0011989.1 MGP_129S1SvImJ_G0010078.1 mouse_genomes_project 1 34453519 34454423 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005946.1 MGP_129S1SvImJ_G0004987.1 mouse_genomes_project 1 142675980 142714530 - Gm5833 lincRNA lincRNA MGP_129S1SvImJ_T0005947.1 MGP_129S1SvImJ_G0004987.1 mouse_genomes_project 1 142703886 142714518 - Gm5833 lincRNA lincRNA MGP_129S1SvImJ_T0005913.1 MGP_129S1SvImJ_G0004959.1 mouse_genomes_project 1 128266963 128274709 - 1700121L03Rik lincRNA lincRNA MGP_129S1SvImJ_T0000747.1 MGP_129S1SvImJ_G0000684.1 mouse_genomes_project 1 167021019 167022142 + TEC TEC MGP_129S1SvImJ_T0099131.1 MGP_129S1SvImJ_G0037198.1 mouse_genomes_project 1 172911466 172911573 + Gm24182 snRNA snRNA MGP_129S1SvImJ_T0021216.1 MGP_129S1SvImJ_G0016284.1 mouse_genomes_project 1 89681506 89697268 - MGP_129S1SvImJ_P0021216 protein_coding protein_coding MGP_129S1SvImJ_T0021217.1 MGP_129S1SvImJ_G0016284.1 mouse_genomes_project 1 89683858 89697192 - MGP_129S1SvImJ_P0021217 protein_coding protein_coding MGP_129S1SvImJ_T0021218.1 MGP_129S1SvImJ_G0016284.1 mouse_genomes_project 1 89684008 89697141 - MGP_129S1SvImJ_P0021218 protein_coding protein_coding MGP_129S1SvImJ_T0021219.1 MGP_129S1SvImJ_G0016284.1 mouse_genomes_project 1 89685429 89688814 - MGP_129S1SvImJ_P0021219 protein_coding protein_coding MGP_129S1SvImJ_T0021220.1 MGP_129S1SvImJ_G0016284.1 mouse_genomes_project 1 89694238 89697214 - protein_coding retained_intron MGP_129S1SvImJ_T0023329.1 MGP_129S1SvImJ_G0016727.1 mouse_genomes_project 1 175925910 175949320 + MGP_129S1SvImJ_P0023329 Sh2d1b2 protein_coding protein_coding MGP_129S1SvImJ_T0023330.1 MGP_129S1SvImJ_G0016727.1 mouse_genomes_project 1 175925910 175947368 + MGP_129S1SvImJ_P0023330 Sh2d1b2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024159.1 MGP_129S1SvImJ_G0016928.1 mouse_genomes_project 1 196552590 196601183 - MGP_129S1SvImJ_P0024159 Cenpf protein_coding protein_coding MGP_129S1SvImJ_T0024160.1 MGP_129S1SvImJ_G0016928.1 mouse_genomes_project 1 196554680 196560841 - MGP_129S1SvImJ_P0024160 Cenpf protein_coding protein_coding MGP_129S1SvImJ_T0024161.1 MGP_129S1SvImJ_G0016928.1 mouse_genomes_project 1 196571821 196601183 - MGP_129S1SvImJ_P0024161 Cenpf protein_coding protein_coding MGP_129S1SvImJ_T0024162.1 MGP_129S1SvImJ_G0016928.1 mouse_genomes_project 1 196580854 196584243 - Cenpf protein_coding retained_intron MGP_129S1SvImJ_T0024163.1 MGP_129S1SvImJ_G0016928.1 mouse_genomes_project 1 196596926 196601132 - MGP_129S1SvImJ_P0024163 Cenpf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024164.1 MGP_129S1SvImJ_G0016928.1 mouse_genomes_project 1 196600160 196601183 - Cenpf protein_coding retained_intron MGP_129S1SvImJ_T0005781.1 MGP_129S1SvImJ_G0004854.1 mouse_genomes_project 1 64134781 64139045 + Gm13749 lincRNA lincRNA MGP_129S1SvImJ_T0002999.1 MGP_129S1SvImJ_G0002817.1 mouse_genomes_project 1 194440557 194478452 - Gm36388 antisense antisense MGP_129S1SvImJ_T0005848.1 MGP_129S1SvImJ_G0004906.1 mouse_genomes_project 1 91626173 91631984 + 4930434B07Rik lincRNA lincRNA MGP_129S1SvImJ_T0100369.1 MGP_129S1SvImJ_G0038436.1 mouse_genomes_project 1 130565998 130566107 + Gm23734 snoRNA snoRNA MGP_129S1SvImJ_T0005758.1 MGP_129S1SvImJ_G0004836.1 mouse_genomes_project 1 56926144 56928205 + 1700126A01Rik lincRNA lincRNA MGP_129S1SvImJ_T0002914.1 MGP_129S1SvImJ_G0002746.1 mouse_genomes_project 1 137537496 137545788 + Gm15851 antisense antisense MGP_129S1SvImJ_T0022119.1 MGP_129S1SvImJ_G0016480.1 mouse_genomes_project 1 136653400 136662053 + MGP_129S1SvImJ_P0022119 Ppp1r15b protein_coding protein_coding MGP_129S1SvImJ_T0022120.1 MGP_129S1SvImJ_G0016480.1 mouse_genomes_project 1 136653601 136662053 + Ppp1r15b protein_coding processed_transcript MGP_129S1SvImJ_T0002839.1 MGP_129S1SvImJ_G0002692.1 mouse_genomes_project 1 62236125 62241040 - Pard3bos2 antisense antisense MGP_129S1SvImJ_T0023245.1 MGP_129S1SvImJ_G0016704.1 mouse_genomes_project 1 171902864 171918641 + MGP_129S1SvImJ_P0023245 Tada1 protein_coding protein_coding MGP_129S1SvImJ_T0023246.1 MGP_129S1SvImJ_G0016704.1 mouse_genomes_project 1 171903084 171912696 + Tada1 protein_coding retained_intron MGP_129S1SvImJ_T0023247.1 MGP_129S1SvImJ_G0016704.1 mouse_genomes_project 1 171903091 171907876 + Tada1 protein_coding retained_intron MGP_129S1SvImJ_T0023248.1 MGP_129S1SvImJ_G0016704.1 mouse_genomes_project 1 171903106 171906238 + MGP_129S1SvImJ_P0023248 Tada1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0009532.1 MGP_129S1SvImJ_G0007648.1 mouse_genomes_project 1 94971083 94971211 + Mir6345 miRNA miRNA MGP_129S1SvImJ_T0023135.1 MGP_129S1SvImJ_G0016684.1 mouse_genomes_project 1 169742041 169881646 + MGP_129S1SvImJ_P0023135 Nme7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023137.1 MGP_129S1SvImJ_G0016684.1 mouse_genomes_project 1 169745592 169881221 + MGP_129S1SvImJ_P0023137 Nme7 protein_coding protein_coding MGP_129S1SvImJ_T0023138.1 MGP_129S1SvImJ_G0016684.1 mouse_genomes_project 1 169745647 169789514 + Nme7 protein_coding processed_transcript MGP_129S1SvImJ_T0023139.1 MGP_129S1SvImJ_G0016684.1 mouse_genomes_project 1 169745668 169751704 + Nme7 protein_coding retained_intron MGP_129S1SvImJ_T0023140.1 MGP_129S1SvImJ_G0016684.1 mouse_genomes_project 1 169745993 169881215 + MGP_129S1SvImJ_P0023140 Nme7 protein_coding protein_coding MGP_129S1SvImJ_T0023141.1 MGP_129S1SvImJ_G0016684.1 mouse_genomes_project 1 169746017 169772975 + Nme7 protein_coding retained_intron MGP_129S1SvImJ_T0023142.1 MGP_129S1SvImJ_G0016684.1 mouse_genomes_project 1 169751415 169788260 + MGP_129S1SvImJ_P0023142 Nme7 protein_coding protein_coding MGP_129S1SvImJ_T0023143.1 MGP_129S1SvImJ_G0016684.1 mouse_genomes_project 1 169783961 169821597 + Nme7 protein_coding retained_intron MGP_129S1SvImJ_T0023144.1 MGP_129S1SvImJ_G0016684.1 mouse_genomes_project 1 169814046 169881157 + Nme7 protein_coding processed_transcript MGP_129S1SvImJ_T0023145.1 MGP_129S1SvImJ_G0016684.1 mouse_genomes_project 1 169814046 169881213 + Nme7 protein_coding processed_transcript MGP_129S1SvImJ_T0009512.1 MGP_129S1SvImJ_G0007628.1 mouse_genomes_project 1 74789471 74789538 - Mir1928 miRNA miRNA MGP_129S1SvImJ_T0102083.1 MGP_129S1SvImJ_G0039918.1 mouse_genomes_project 1 138191336 138195501 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002867.1 MGP_129S1SvImJ_G0002712.1 mouse_genomes_project 1 88261541 88390726 - Gm28375 antisense antisense MGP_129S1SvImJ_T0011872.1 MGP_129S1SvImJ_G0009961.1 mouse_genomes_project 1 1721609 1723940 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024220.1 MGP_129S1SvImJ_G0016939.1 mouse_genomes_project 1 198120902 198137716 + Batf3 protein_coding processed_transcript MGP_129S1SvImJ_T0024221.1 MGP_129S1SvImJ_G0016939.1 mouse_genomes_project 1 198120935 198138175 + Batf3 protein_coding processed_transcript MGP_129S1SvImJ_T0024222.1 MGP_129S1SvImJ_G0016939.1 mouse_genomes_project 1 198121380 198138173 + MGP_129S1SvImJ_P0024222 Batf3 protein_coding protein_coding MGP_129S1SvImJ_T0024223.1 MGP_129S1SvImJ_G0016939.1 mouse_genomes_project 1 198121479 198137716 + Batf3 protein_coding processed_transcript MGP_129S1SvImJ_T0024224.1 MGP_129S1SvImJ_G0016939.1 mouse_genomes_project 1 198123554 198138139 + Batf3 protein_coding retained_intron MGP_129S1SvImJ_T0023759.1 MGP_129S1SvImJ_G0016846.1 mouse_genomes_project 1 182968091 183109340 + Sdccag8 protein_coding retained_intron MGP_129S1SvImJ_T0023760.1 MGP_129S1SvImJ_G0016846.1 mouse_genomes_project 1 182968091 182998982 + Sdccag8 protein_coding retained_intron MGP_129S1SvImJ_T0023761.1 MGP_129S1SvImJ_G0016846.1 mouse_genomes_project 1 182968091 183016549 + MGP_129S1SvImJ_P0023761 Sdccag8 protein_coding protein_coding MGP_129S1SvImJ_T0023762.1 MGP_129S1SvImJ_G0016846.1 mouse_genomes_project 1 182968091 183176800 + MGP_129S1SvImJ_P0023762 Sdccag8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023763.1 MGP_129S1SvImJ_G0016846.1 mouse_genomes_project 1 182968091 183176800 + MGP_129S1SvImJ_P0023763 Sdccag8 protein_coding protein_coding MGP_129S1SvImJ_T0023764.1 MGP_129S1SvImJ_G0016846.1 mouse_genomes_project 1 183153245 183176800 + Sdccag8 protein_coding processed_transcript MGP_129S1SvImJ_T0011283.1 MGP_129S1SvImJ_G0009399.1 mouse_genomes_project 1 200072755 200073044 - Gm23583 misc_RNA misc_RNA MGP_129S1SvImJ_T0018923.1 MGP_129S1SvImJ_G0015837.1 mouse_genomes_project 1 8722610 9265730 + MGP_129S1SvImJ_P0018923 A830018L16Rik protein_coding protein_coding MGP_129S1SvImJ_T0018924.1 MGP_129S1SvImJ_G0015837.1 mouse_genomes_project 1 8722610 8916535 + MGP_129S1SvImJ_P0018924 A830018L16Rik protein_coding protein_coding MGP_129S1SvImJ_T0018925.1 MGP_129S1SvImJ_G0015837.1 mouse_genomes_project 1 8722617 8827854 + A830018L16Rik protein_coding processed_transcript MGP_129S1SvImJ_T0018926.1 MGP_129S1SvImJ_G0015837.1 mouse_genomes_project 1 8722617 8851089 + A830018L16Rik protein_coding processed_transcript MGP_129S1SvImJ_T0018927.1 MGP_129S1SvImJ_G0015837.1 mouse_genomes_project 1 8722617 9224863 + MGP_129S1SvImJ_P0018927 A830018L16Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018928.1 MGP_129S1SvImJ_G0015837.1 mouse_genomes_project 1 8722774 8916345 + MGP_129S1SvImJ_P0018928 A830018L16Rik protein_coding protein_coding MGP_129S1SvImJ_T0018929.1 MGP_129S1SvImJ_G0015837.1 mouse_genomes_project 1 8723014 9265225 + MGP_129S1SvImJ_P0018929 A830018L16Rik protein_coding protein_coding MGP_129S1SvImJ_T0018930.1 MGP_129S1SvImJ_G0015837.1 mouse_genomes_project 1 8723014 9265225 + MGP_129S1SvImJ_P0018930 A830018L16Rik protein_coding protein_coding MGP_129S1SvImJ_T0018931.1 MGP_129S1SvImJ_G0015837.1 mouse_genomes_project 1 8827815 8914479 + MGP_129S1SvImJ_P0018931 A830018L16Rik protein_coding protein_coding MGP_129S1SvImJ_T0018932.1 MGP_129S1SvImJ_G0015837.1 mouse_genomes_project 1 8893154 8911156 + A830018L16Rik protein_coding processed_transcript MGP_129S1SvImJ_T0009475.1 MGP_129S1SvImJ_G0007591.1 mouse_genomes_project 1 5816443 5816553 - Gm23358 miRNA miRNA MGP_129S1SvImJ_T0020989.1 MGP_129S1SvImJ_G0016233.1 mouse_genomes_project 1 86824028 86914415 + MGP_129S1SvImJ_P0020989 Sp100 protein_coding protein_coding MGP_129S1SvImJ_T0020990.1 MGP_129S1SvImJ_G0016233.1 mouse_genomes_project 1 86867488 86900817 + MGP_129S1SvImJ_P0020990 Sp100 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020991.1 MGP_129S1SvImJ_G0016233.1 mouse_genomes_project 1 86875708 86886558 + Sp100 protein_coding processed_transcript MGP_129S1SvImJ_T0020992.1 MGP_129S1SvImJ_G0016233.1 mouse_genomes_project 1 86877600 86883168 + Sp100 protein_coding retained_intron MGP_129S1SvImJ_T0020993.1 MGP_129S1SvImJ_G0016233.1 mouse_genomes_project 1 86898387 86904120 + Sp100 protein_coding retained_intron MGP_129S1SvImJ_T0020994.1 MGP_129S1SvImJ_G0016233.1 mouse_genomes_project 1 86898745 86913837 + MGP_129S1SvImJ_P0020994 Sp100 protein_coding protein_coding MGP_129S1SvImJ_T0020995.1 MGP_129S1SvImJ_G0016233.1 mouse_genomes_project 1 86907872 86912426 + MGP_129S1SvImJ_P0020995 Sp100 protein_coding protein_coding MGP_129S1SvImJ_T0019589.1 MGP_129S1SvImJ_G0015976.1 mouse_genomes_project 1 41916121 41918406 + Gpr45 protein_coding processed_transcript MGP_129S1SvImJ_T0019590.1 MGP_129S1SvImJ_G0015976.1 mouse_genomes_project 1 41916212 41997615 + MGP_129S1SvImJ_P0019590 Gpr45 protein_coding protein_coding MGP_129S1SvImJ_T0019591.1 MGP_129S1SvImJ_G0015976.1 mouse_genomes_project 1 41916388 41993338 + Gpr45 protein_coding processed_transcript MGP_129S1SvImJ_T0019592.1 MGP_129S1SvImJ_G0015976.1 mouse_genomes_project 1 41916431 41917128 + Gpr45 protein_coding processed_transcript MGP_129S1SvImJ_T0019593.1 MGP_129S1SvImJ_G0015976.1 mouse_genomes_project 1 41994216 41995764 + MGP_129S1SvImJ_P0019593 Gpr45 protein_coding protein_coding MGP_129S1SvImJ_T0023299.1 MGP_129S1SvImJ_G0016720.1 mouse_genomes_project 1 175294427 175338648 + MGP_129S1SvImJ_P0023299 Rgs5 protein_coding protein_coding MGP_129S1SvImJ_T0023300.1 MGP_129S1SvImJ_G0016720.1 mouse_genomes_project 1 175294448 175322710 + MGP_129S1SvImJ_P0023300 Rgs5 protein_coding protein_coding MGP_129S1SvImJ_T0021755.1 MGP_129S1SvImJ_G0016401.1 mouse_genomes_project 1 122777495 122844975 + MGP_129S1SvImJ_P0021755 Sctr protein_coding protein_coding MGP_129S1SvImJ_T0021756.1 MGP_129S1SvImJ_G0016401.1 mouse_genomes_project 1 122777635 122844973 + MGP_129S1SvImJ_P0021756 Sctr protein_coding protein_coding MGP_129S1SvImJ_T0005842.1 MGP_129S1SvImJ_G0004901.1 mouse_genomes_project 1 90198254 90199101 + Platr5 lincRNA lincRNA MGP_129S1SvImJ_T0005843.1 MGP_129S1SvImJ_G0004901.1 mouse_genomes_project 1 90198318 90199074 + Platr5 lincRNA lincRNA MGP_129S1SvImJ_T0000787.1 MGP_129S1SvImJ_G0000723.1 mouse_genomes_project 1 186559063 186561734 - TEC TEC MGP_129S1SvImJ_T0002986.1 MGP_129S1SvImJ_G0002806.1 mouse_genomes_project 1 187275709 187278793 + H3f3aos antisense antisense MGP_129S1SvImJ_T0002987.1 MGP_129S1SvImJ_G0002806.1 mouse_genomes_project 1 187275717 187278622 + H3f3aos antisense antisense MGP_129S1SvImJ_T0009552.1 MGP_129S1SvImJ_G0007668.1 mouse_genomes_project 1 158761832 158761943 + Mir8114 miRNA miRNA MGP_129S1SvImJ_T0002829.1 MGP_129S1SvImJ_G0002686.1 mouse_genomes_project 1 58962982 59006608 + Gm29018 antisense antisense MGP_129S1SvImJ_T0002830.1 MGP_129S1SvImJ_G0002686.1 mouse_genomes_project 1 58980811 58982663 + Gm29018 antisense antisense MGP_129S1SvImJ_T0011964.1 MGP_129S1SvImJ_G0010053.1 mouse_genomes_project 1 29511087 29511646 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012134.1 MGP_129S1SvImJ_G0010223.1 mouse_genomes_project 1 83970845 83971475 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012087.1 MGP_129S1SvImJ_G0010176.1 mouse_genomes_project 1 63510024 63510641 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023204.1 MGP_129S1SvImJ_G0016698.1 mouse_genomes_project 1 171294367 171381957 + MGP_129S1SvImJ_P0023204 Cd247 protein_coding protein_coding MGP_129S1SvImJ_T0023205.1 MGP_129S1SvImJ_G0016698.1 mouse_genomes_project 1 171294367 171381957 + MGP_129S1SvImJ_P0023205 Cd247 protein_coding protein_coding MGP_129S1SvImJ_T0023206.1 MGP_129S1SvImJ_G0016698.1 mouse_genomes_project 1 171294367 171381957 + MGP_129S1SvImJ_P0023206 Cd247 protein_coding protein_coding MGP_129S1SvImJ_T0023207.1 MGP_129S1SvImJ_G0016698.1 mouse_genomes_project 1 171294375 171373113 + MGP_129S1SvImJ_P0023207 Cd247 protein_coding protein_coding MGP_129S1SvImJ_T0023208.1 MGP_129S1SvImJ_G0016698.1 mouse_genomes_project 1 171294409 171378240 + MGP_129S1SvImJ_P0023208 Cd247 protein_coding protein_coding MGP_129S1SvImJ_T0023209.1 MGP_129S1SvImJ_G0016698.1 mouse_genomes_project 1 171294451 171379898 + MGP_129S1SvImJ_P0023209 Cd247 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023210.1 MGP_129S1SvImJ_G0016698.1 mouse_genomes_project 1 171294451 171381053 + MGP_129S1SvImJ_P0023210 Cd247 protein_coding protein_coding MGP_129S1SvImJ_T0023211.1 MGP_129S1SvImJ_G0016698.1 mouse_genomes_project 1 171369262 171372602 + Cd247 protein_coding retained_intron MGP_129S1SvImJ_T0023212.1 MGP_129S1SvImJ_G0016698.1 mouse_genomes_project 1 171375458 171388081 + Cd247 protein_coding processed_transcript MGP_129S1SvImJ_T0023663.1 MGP_129S1SvImJ_G0016812.1 mouse_genomes_project 1 179455762 179473640 - MGP_129S1SvImJ_P0023663 Pyhin1 protein_coding protein_coding MGP_129S1SvImJ_T0005882.1 MGP_129S1SvImJ_G0004936.1 mouse_genomes_project 1 109628430 109630642 - Gm15391 lincRNA lincRNA MGP_129S1SvImJ_T0000549.1 MGP_129S1SvImJ_G0000488.1 mouse_genomes_project 1 79096220 79097028 + TEC TEC MGP_129S1SvImJ_T0023958.1 MGP_129S1SvImJ_G0016888.1 mouse_genomes_project 1 188377503 188406162 - MGP_129S1SvImJ_P0023958 Lbr protein_coding protein_coding MGP_129S1SvImJ_T0023959.1 MGP_129S1SvImJ_G0016888.1 mouse_genomes_project 1 188377524 188382701 - Lbr protein_coding retained_intron MGP_129S1SvImJ_T0023960.1 MGP_129S1SvImJ_G0016888.1 mouse_genomes_project 1 188382038 188390945 - MGP_129S1SvImJ_P0023960 Lbr protein_coding protein_coding MGP_129S1SvImJ_T0023961.1 MGP_129S1SvImJ_G0016888.1 mouse_genomes_project 1 188383715 188391213 - Lbr protein_coding retained_intron MGP_129S1SvImJ_T0023962.1 MGP_129S1SvImJ_G0016888.1 mouse_genomes_project 1 188399903 188406829 - MGP_129S1SvImJ_P0023962 Lbr protein_coding protein_coding MGP_129S1SvImJ_T0023963.1 MGP_129S1SvImJ_G0016888.1 mouse_genomes_project 1 188399932 188406144 - MGP_129S1SvImJ_P0023963 Lbr protein_coding protein_coding MGP_129S1SvImJ_T0023964.1 MGP_129S1SvImJ_G0016888.1 mouse_genomes_project 1 188400083 188406642 - MGP_129S1SvImJ_P0023964 Lbr protein_coding protein_coding MGP_129S1SvImJ_T0023965.1 MGP_129S1SvImJ_G0016888.1 mouse_genomes_project 1 188402253 188406109 - MGP_129S1SvImJ_P0023965 Lbr protein_coding protein_coding MGP_129S1SvImJ_T0005948.1 MGP_129S1SvImJ_G0004988.1 mouse_genomes_project 1 142911992 142912672 - 1700019P21Rik lincRNA lincRNA MGP_129S1SvImJ_T0021758.1 MGP_129S1SvImJ_G0016403.1 mouse_genomes_project 1 122896247 122903874 - MGP_129S1SvImJ_P0021758 Dbi protein_coding protein_coding MGP_129S1SvImJ_T0021759.1 MGP_129S1SvImJ_G0016403.1 mouse_genomes_project 1 122896251 122903938 - MGP_129S1SvImJ_P0021759 Dbi protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021760.1 MGP_129S1SvImJ_G0016403.1 mouse_genomes_project 1 122896330 122903091 - Dbi protein_coding processed_transcript MGP_129S1SvImJ_T0021761.1 MGP_129S1SvImJ_G0016403.1 mouse_genomes_project 1 122896361 122903858 - MGP_129S1SvImJ_P0021761 Dbi protein_coding protein_coding MGP_129S1SvImJ_T0021762.1 MGP_129S1SvImJ_G0016403.1 mouse_genomes_project 1 122898971 122903968 - Dbi protein_coding retained_intron MGP_129S1SvImJ_T0021763.1 MGP_129S1SvImJ_G0016403.1 mouse_genomes_project 1 122902678 122903935 - Dbi protein_coding retained_intron MGP_129S1SvImJ_T0023689.1 MGP_129S1SvImJ_G0016832.1 mouse_genomes_project 1 180504865 180512197 + MGP_129S1SvImJ_P0023689 Olfr220 protein_coding protein_coding MGP_129S1SvImJ_T0023690.1 MGP_129S1SvImJ_G0016832.1 mouse_genomes_project 1 180511219 180512197 + MGP_129S1SvImJ_P0023690 Olfr220 protein_coding protein_coding MGP_129S1SvImJ_T0021252.1 MGP_129S1SvImJ_G0016295.1 mouse_genomes_project 1 92107651 92117291 + Cops8 protein_coding retained_intron MGP_129S1SvImJ_T0021253.1 MGP_129S1SvImJ_G0016295.1 mouse_genomes_project 1 92107653 92115634 + Cops8 protein_coding retained_intron MGP_129S1SvImJ_T0021254.1 MGP_129S1SvImJ_G0016295.1 mouse_genomes_project 1 92107674 92109826 + Cops8 protein_coding retained_intron MGP_129S1SvImJ_T0021255.1 MGP_129S1SvImJ_G0016295.1 mouse_genomes_project 1 92107674 92115205 + Cops8 protein_coding processed_transcript MGP_129S1SvImJ_T0021256.1 MGP_129S1SvImJ_G0016295.1 mouse_genomes_project 1 92107703 92116348 + MGP_129S1SvImJ_P0021256 Cops8 protein_coding protein_coding MGP_129S1SvImJ_T0021257.1 MGP_129S1SvImJ_G0016295.1 mouse_genomes_project 1 92107725 92117509 + MGP_129S1SvImJ_P0021257 Cops8 protein_coding protein_coding MGP_129S1SvImJ_T0021258.1 MGP_129S1SvImJ_G0016295.1 mouse_genomes_project 1 92113821 92115496 + Cops8 protein_coding retained_intron MGP_129S1SvImJ_T0021259.1 MGP_129S1SvImJ_G0016295.1 mouse_genomes_project 1 92115513 92116561 + Cops8 protein_coding retained_intron MGP_129S1SvImJ_T0000496.1 MGP_129S1SvImJ_G0000435.1 mouse_genomes_project 1 53447108 53448565 + TEC TEC MGP_129S1SvImJ_T0000506.1 MGP_129S1SvImJ_G0000445.1 mouse_genomes_project 1 59409197 59410835 - TEC TEC MGP_129S1SvImJ_T0022642.1 MGP_129S1SvImJ_G0016591.1 mouse_genomes_project 1 157575001 157616774 + MGP_129S1SvImJ_P0022642 Ncf2 protein_coding protein_coding MGP_129S1SvImJ_T0022643.1 MGP_129S1SvImJ_G0016591.1 mouse_genomes_project 1 157582639 157602941 + MGP_129S1SvImJ_P0022643 Ncf2 protein_coding protein_coding MGP_129S1SvImJ_T0022644.1 MGP_129S1SvImJ_G0016591.1 mouse_genomes_project 1 157582692 157616773 + MGP_129S1SvImJ_P0022644 Ncf2 protein_coding protein_coding MGP_129S1SvImJ_T0022645.1 MGP_129S1SvImJ_G0016591.1 mouse_genomes_project 1 157582780 157589186 + Ncf2 protein_coding retained_intron MGP_129S1SvImJ_T0022646.1 MGP_129S1SvImJ_G0016591.1 mouse_genomes_project 1 157587437 157602940 + Ncf2 protein_coding retained_intron MGP_129S1SvImJ_T0022647.1 MGP_129S1SvImJ_G0016591.1 mouse_genomes_project 1 157602217 157603133 + Ncf2 protein_coding retained_intron MGP_129S1SvImJ_T0002888.1 MGP_129S1SvImJ_G0002729.1 mouse_genomes_project 1 108710699 108743740 + D630008O14Rik antisense antisense MGP_129S1SvImJ_T0002889.1 MGP_129S1SvImJ_G0002729.1 mouse_genomes_project 1 108710699 108727758 + D630008O14Rik antisense antisense MGP_129S1SvImJ_T0000406.1 MGP_129S1SvImJ_G0000348.1 mouse_genomes_project 1 10598495 10600111 - TEC TEC MGP_129S1SvImJ_T0020176.1 MGP_129S1SvImJ_G0016082.1 mouse_genomes_project 1 61723443 62182746 + Pard3b protein_coding processed_transcript MGP_129S1SvImJ_T0020177.1 MGP_129S1SvImJ_G0016082.1 mouse_genomes_project 1 61723443 62761258 + MGP_129S1SvImJ_P0020177 Pard3b protein_coding protein_coding MGP_129S1SvImJ_T0020178.1 MGP_129S1SvImJ_G0016082.1 mouse_genomes_project 1 61723494 61861444 + Pard3b protein_coding retained_intron MGP_129S1SvImJ_T0020179.1 MGP_129S1SvImJ_G0016082.1 mouse_genomes_project 1 61723505 62277288 + Pard3b protein_coding retained_intron MGP_129S1SvImJ_T0020180.1 MGP_129S1SvImJ_G0016082.1 mouse_genomes_project 1 61723862 62756923 + MGP_129S1SvImJ_P0020180 Pard3b protein_coding protein_coding MGP_129S1SvImJ_T0020181.1 MGP_129S1SvImJ_G0016082.1 mouse_genomes_project 1 61723862 62761258 + MGP_129S1SvImJ_P0020181 Pard3b protein_coding protein_coding MGP_129S1SvImJ_T0022881.1 MGP_129S1SvImJ_G0016635.1 mouse_genomes_project 1 163461894 163797514 + MGP_129S1SvImJ_P0022881 Astn1 protein_coding protein_coding MGP_129S1SvImJ_T0022882.1 MGP_129S1SvImJ_G0016635.1 mouse_genomes_project 1 163461925 163797516 + MGP_129S1SvImJ_P0022882 Astn1 protein_coding protein_coding MGP_129S1SvImJ_T0022883.1 MGP_129S1SvImJ_G0016635.1 mouse_genomes_project 1 163463236 163714714 + MGP_129S1SvImJ_P0022883 Astn1 protein_coding protein_coding MGP_129S1SvImJ_T0022884.1 MGP_129S1SvImJ_G0016635.1 mouse_genomes_project 1 163463284 163714440 + MGP_129S1SvImJ_P0022884 Astn1 protein_coding protein_coding MGP_129S1SvImJ_T0022885.1 MGP_129S1SvImJ_G0016635.1 mouse_genomes_project 1 163463297 163785298 + MGP_129S1SvImJ_P0022885 Astn1 protein_coding protein_coding MGP_129S1SvImJ_T0022886.1 MGP_129S1SvImJ_G0016635.1 mouse_genomes_project 1 163614965 163626013 + Astn1 protein_coding processed_transcript MGP_129S1SvImJ_T0022887.1 MGP_129S1SvImJ_G0016635.1 mouse_genomes_project 1 163657634 163701599 + MGP_129S1SvImJ_P0022887 Astn1 protein_coding protein_coding MGP_129S1SvImJ_T0022888.1 MGP_129S1SvImJ_G0016635.1 mouse_genomes_project 1 163701349 163713610 + Astn1 protein_coding retained_intron MGP_129S1SvImJ_T0022889.1 MGP_129S1SvImJ_G0016635.1 mouse_genomes_project 1 163757991 163772055 + MGP_129S1SvImJ_P0022889 Astn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022890.1 MGP_129S1SvImJ_G0016635.1 mouse_genomes_project 1 163758139 163790043 + MGP_129S1SvImJ_P0022890 Astn1 protein_coding protein_coding MGP_129S1SvImJ_T0022891.1 MGP_129S1SvImJ_G0016635.1 mouse_genomes_project 1 163784599 163794267 + Astn1 protein_coding processed_transcript MGP_129S1SvImJ_T0012389.1 MGP_129S1SvImJ_G0010478.1 mouse_genomes_project 1 198518988 198519453 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012293.1 MGP_129S1SvImJ_G0010382.1 mouse_genomes_project 1 153572014 153575987 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017120.1 MGP_129S1SvImJ_G0015128.1 mouse_genomes_project 1 202157643 202203047 + A330023F24Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017121.1 MGP_129S1SvImJ_G0015128.1 mouse_genomes_project 1 202157653 202208950 + A330023F24Rik processed_transcript retained_intron MGP_129S1SvImJ_T0017122.1 MGP_129S1SvImJ_G0015128.1 mouse_genomes_project 1 202198944 202218454 + A330023F24Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017123.1 MGP_129S1SvImJ_G0015128.1 mouse_genomes_project 1 202205630 202219429 + A330023F24Rik processed_transcript retained_intron MGP_129S1SvImJ_T0102094.1 MGP_129S1SvImJ_G0039929.1 mouse_genomes_project 1 179059281 179060464 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0009482.1 MGP_129S1SvImJ_G0007598.1 mouse_genomes_project 1 21050564 21050635 + Mir30a miRNA miRNA MGP_129S1SvImJ_T0005813.1 MGP_129S1SvImJ_G0004877.1 mouse_genomes_project 1 76634793 76636892 - Gm29065 lincRNA lincRNA MGP_129S1SvImJ_T0099065.1 MGP_129S1SvImJ_G0037132.1 mouse_genomes_project 1 10706733 10706845 - Gm23169 snRNA snRNA MGP_129S1SvImJ_T0012074.1 MGP_129S1SvImJ_G0010163.1 mouse_genomes_project 1 60887704 60888531 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023343.1 MGP_129S1SvImJ_G0016733.1 mouse_genomes_project 1 176430601 176614305 - MGP_129S1SvImJ_P0023343 Atf6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0023344.1 MGP_129S1SvImJ_G0016733.1 mouse_genomes_project 1 176529054 176531152 - Atf6 protein_coding retained_intron MGP_129S1SvImJ_T0024351.1 MGP_129S1SvImJ_G0016964.1 mouse_genomes_project 1 200443735 200467615 - MGP_129S1SvImJ_P0024351 Camk1g protein_coding protein_coding MGP_129S1SvImJ_T0024352.1 MGP_129S1SvImJ_G0016964.1 mouse_genomes_project 1 200443735 200467688 - MGP_129S1SvImJ_P0024352 Camk1g protein_coding protein_coding MGP_129S1SvImJ_T0024353.1 MGP_129S1SvImJ_G0016964.1 mouse_genomes_project 1 200446150 200457168 - MGP_129S1SvImJ_P0024353 Camk1g protein_coding protein_coding MGP_129S1SvImJ_T0024354.1 MGP_129S1SvImJ_G0016964.1 mouse_genomes_project 1 200452185 200467635 - Camk1g protein_coding retained_intron MGP_129S1SvImJ_T0021221.1 MGP_129S1SvImJ_G0016285.1 mouse_genomes_project 1 89697295 89728628 + Trpm8 protein_coding processed_transcript MGP_129S1SvImJ_T0021222.1 MGP_129S1SvImJ_G0016285.1 mouse_genomes_project 1 89723748 89812507 + MGP_129S1SvImJ_P0021222 Trpm8 protein_coding protein_coding MGP_129S1SvImJ_T0021223.1 MGP_129S1SvImJ_G0016285.1 mouse_genomes_project 1 89727313 89812949 + MGP_129S1SvImJ_P0021223 Trpm8 protein_coding protein_coding MGP_129S1SvImJ_T0021224.1 MGP_129S1SvImJ_G0016285.1 mouse_genomes_project 1 89741088 89812507 + MGP_129S1SvImJ_P0021224 Trpm8 protein_coding protein_coding MGP_129S1SvImJ_T0021922.1 MGP_129S1SvImJ_G0016437.1 mouse_genomes_project 1 134058287 134108082 - MGP_129S1SvImJ_P0021922 Gm29427 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024206.1 MGP_129S1SvImJ_G0016936.1 mouse_genomes_project 1 198058034 198064991 + MGP_129S1SvImJ_P0024206 Spata45 protein_coding protein_coding MGP_129S1SvImJ_T0024207.1 MGP_129S1SvImJ_G0016936.1 mouse_genomes_project 1 198058214 198064998 + MGP_129S1SvImJ_P0024207 Spata45 protein_coding protein_coding MGP_129S1SvImJ_T0002966.1 MGP_129S1SvImJ_G0002789.1 mouse_genomes_project 1 175659049 175662047 + 3110045C21Rik antisense antisense MGP_129S1SvImJ_T0002967.1 MGP_129S1SvImJ_G0002789.1 mouse_genomes_project 1 175659092 175662021 + 3110045C21Rik antisense antisense MGP_129S1SvImJ_T0012259.1 MGP_129S1SvImJ_G0010348.1 mouse_genomes_project 1 137666917 137667855 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021025.1 MGP_129S1SvImJ_G0016240.1 mouse_genomes_project 1 87276134 87292414 + MGP_129S1SvImJ_P0021025 2810459M11Rik protein_coding protein_coding MGP_129S1SvImJ_T0021026.1 MGP_129S1SvImJ_G0016240.1 mouse_genomes_project 1 87276134 87290308 + MGP_129S1SvImJ_P0021026 2810459M11Rik protein_coding protein_coding MGP_129S1SvImJ_T0012363.1 MGP_129S1SvImJ_G0010452.1 mouse_genomes_project 1 185070386 185070963 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022461.1 MGP_129S1SvImJ_G0016553.1 mouse_genomes_project 1 143519729 143561388 + MGP_129S1SvImJ_P0022461 Aspm protein_coding protein_coding MGP_129S1SvImJ_T0022462.1 MGP_129S1SvImJ_G0016553.1 mouse_genomes_project 1 143519730 143540372 + Aspm protein_coding retained_intron MGP_129S1SvImJ_T0022463.1 MGP_129S1SvImJ_G0016553.1 mouse_genomes_project 1 143519732 143561391 + MGP_129S1SvImJ_P0022463 Aspm protein_coding protein_coding MGP_129S1SvImJ_T0022464.1 MGP_129S1SvImJ_G0016553.1 mouse_genomes_project 1 143519776 143522092 + Aspm protein_coding retained_intron MGP_129S1SvImJ_T0022465.1 MGP_129S1SvImJ_G0016553.1 mouse_genomes_project 1 143549603 143554617 + Aspm protein_coding processed_transcript MGP_129S1SvImJ_T0000570.1 MGP_129S1SvImJ_G0000509.1 mouse_genomes_project 1 85846173 85848960 - TEC TEC MGP_129S1SvImJ_T0005912.1 MGP_129S1SvImJ_G0004958.1 mouse_genomes_project 1 127556592 127925837 - lincRNA lincRNA MGP_129S1SvImJ_T0022321.1 MGP_129S1SvImJ_G0016526.1 mouse_genomes_project 1 139498645 139535055 + MGP_129S1SvImJ_P0022321 Csrp1 protein_coding protein_coding MGP_129S1SvImJ_T0022322.1 MGP_129S1SvImJ_G0016526.1 mouse_genomes_project 1 139507662 139535055 + MGP_129S1SvImJ_P0022322 Csrp1 protein_coding protein_coding MGP_129S1SvImJ_T0000606.1 MGP_129S1SvImJ_G0000545.1 mouse_genomes_project 1 108023935 108027296 - TEC TEC MGP_129S1SvImJ_T0012189.1 MGP_129S1SvImJ_G0010278.1 mouse_genomes_project 1 109075793 109076818 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011884.1 MGP_129S1SvImJ_G0009973.1 mouse_genomes_project 1 4146331 4146995 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000753.1 MGP_129S1SvImJ_G0000690.1 mouse_genomes_project 1 170317269 170320790 - TEC TEC MGP_129S1SvImJ_T0011954.1 MGP_129S1SvImJ_G0010043.1 mouse_genomes_project 1 25278369 25278786 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012245.1 MGP_129S1SvImJ_G0010334.1 mouse_genomes_project 1 127674571 127674962 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023020.1 MGP_129S1SvImJ_G0016658.1 mouse_genomes_project 1 167289338 167621304 - MGP_129S1SvImJ_P0023020 Dnm3 protein_coding protein_coding MGP_129S1SvImJ_T0023021.1 MGP_129S1SvImJ_G0016658.1 mouse_genomes_project 1 167289343 167292591 - Dnm3 protein_coding retained_intron MGP_129S1SvImJ_T0023022.1 MGP_129S1SvImJ_G0016658.1 mouse_genomes_project 1 167294164 167806300 - MGP_129S1SvImJ_P0023022 Dnm3 protein_coding protein_coding MGP_129S1SvImJ_T0023023.1 MGP_129S1SvImJ_G0016658.1 mouse_genomes_project 1 167297074 167806300 - MGP_129S1SvImJ_P0023023 Dnm3 protein_coding protein_coding MGP_129S1SvImJ_T0023024.1 MGP_129S1SvImJ_G0016658.1 mouse_genomes_project 1 167298377 167302876 - Dnm3 protein_coding retained_intron MGP_129S1SvImJ_T0023025.1 MGP_129S1SvImJ_G0016658.1 mouse_genomes_project 1 167317224 167621248 - MGP_129S1SvImJ_P0023025 Dnm3 protein_coding protein_coding MGP_129S1SvImJ_T0023026.1 MGP_129S1SvImJ_G0016658.1 mouse_genomes_project 1 167327635 167442093 - Dnm3 protein_coding retained_intron MGP_129S1SvImJ_T0023027.1 MGP_129S1SvImJ_G0016658.1 mouse_genomes_project 1 167596934 167621263 - Dnm3 protein_coding processed_transcript MGP_129S1SvImJ_T0023028.1 MGP_129S1SvImJ_G0016658.1 mouse_genomes_project 1 167608161 167640352 - Dnm3 protein_coding processed_transcript MGP_129S1SvImJ_T0023029.1 MGP_129S1SvImJ_G0016658.1 mouse_genomes_project 1 167646538 167806278 - Dnm3 protein_coding retained_intron MGP_129S1SvImJ_T0023030.1 MGP_129S1SvImJ_G0016658.1 mouse_genomes_project 1 167709711 167750156 - Dnm3 protein_coding processed_transcript MGP_129S1SvImJ_T0023031.1 MGP_129S1SvImJ_G0016658.1 mouse_genomes_project 1 167729532 167732011 - Dnm3 protein_coding retained_intron MGP_129S1SvImJ_T0002778.1 MGP_129S1SvImJ_G0002646.1 mouse_genomes_project 1 13734007 13739260 + Gm7568 antisense antisense MGP_129S1SvImJ_T0002779.1 MGP_129S1SvImJ_G0002646.1 mouse_genomes_project 1 13734007 13749177 + Gm7568 antisense antisense MGP_129S1SvImJ_T0002780.1 MGP_129S1SvImJ_G0002646.1 mouse_genomes_project 1 13734044 13739256 + Gm7568 antisense antisense MGP_129S1SvImJ_T0012029.1 MGP_129S1SvImJ_G0010118.1 mouse_genomes_project 1 48104036 48105515 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100327.1 MGP_129S1SvImJ_G0038394.1 mouse_genomes_project 1 38320245 38320375 - Gm23722 snoRNA snoRNA MGP_129S1SvImJ_T0023633.1 MGP_129S1SvImJ_G0016797.1 mouse_genomes_project 1 178776801 178777882 - MGP_129S1SvImJ_P0023633 Apcs protein_coding protein_coding MGP_129S1SvImJ_T0002844.1 MGP_129S1SvImJ_G0002697.1 mouse_genomes_project 1 69869916 69904800 + Gm29114 antisense antisense MGP_129S1SvImJ_T0000608.1 MGP_129S1SvImJ_G0000547.1 mouse_genomes_project 1 108369813 108374766 + TEC TEC MGP_129S1SvImJ_T0019800.1 MGP_129S1SvImJ_G0016013.1 mouse_genomes_project 1 52450668 52489652 - MGP_129S1SvImJ_P0019800 1700019D03Rik protein_coding protein_coding MGP_129S1SvImJ_T0019801.1 MGP_129S1SvImJ_G0016013.1 mouse_genomes_project 1 52450668 52479740 - MGP_129S1SvImJ_P0019801 1700019D03Rik protein_coding protein_coding MGP_129S1SvImJ_T0019802.1 MGP_129S1SvImJ_G0016013.1 mouse_genomes_project 1 52450668 52479234 - MGP_129S1SvImJ_P0019802 1700019D03Rik protein_coding protein_coding MGP_129S1SvImJ_T0019803.1 MGP_129S1SvImJ_G0016013.1 mouse_genomes_project 1 52454728 52543900 - MGP_129S1SvImJ_P0019803 1700019D03Rik protein_coding protein_coding MGP_129S1SvImJ_T0019804.1 MGP_129S1SvImJ_G0016013.1 mouse_genomes_project 1 52454733 52498436 - MGP_129S1SvImJ_P0019804 1700019D03Rik protein_coding protein_coding MGP_129S1SvImJ_T0019805.1 MGP_129S1SvImJ_G0016013.1 mouse_genomes_project 1 52454743 52516142 - MGP_129S1SvImJ_P0019805 1700019D03Rik protein_coding protein_coding MGP_129S1SvImJ_T0012000.1 MGP_129S1SvImJ_G0010089.1 mouse_genomes_project 1 41009565 41010610 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005719.1 MGP_129S1SvImJ_G0004813.1 mouse_genomes_project 1 41152163 41152626 - Gm29664 lincRNA lincRNA MGP_129S1SvImJ_T0002803.1 MGP_129S1SvImJ_G0002665.1 mouse_genomes_project 1 36584936 36606548 + Gm15457 antisense antisense MGP_129S1SvImJ_T0021105.1 MGP_129S1SvImJ_G0016261.1 mouse_genomes_project 1 88553360 88579990 + MGP_129S1SvImJ_P0021105 Eif4e2 protein_coding protein_coding MGP_129S1SvImJ_T0021106.1 MGP_129S1SvImJ_G0016261.1 mouse_genomes_project 1 88553360 88566076 + MGP_129S1SvImJ_P0021106 Eif4e2 protein_coding protein_coding MGP_129S1SvImJ_T0021107.1 MGP_129S1SvImJ_G0016261.1 mouse_genomes_project 1 88553360 88568325 + MGP_129S1SvImJ_P0021107 Eif4e2 protein_coding protein_coding MGP_129S1SvImJ_T0021108.1 MGP_129S1SvImJ_G0016261.1 mouse_genomes_project 1 88553360 88579990 + MGP_129S1SvImJ_P0021108 Eif4e2 protein_coding protein_coding MGP_129S1SvImJ_T0021109.1 MGP_129S1SvImJ_G0016261.1 mouse_genomes_project 1 88553360 88574175 + MGP_129S1SvImJ_P0021109 Eif4e2 protein_coding protein_coding MGP_129S1SvImJ_T0021110.1 MGP_129S1SvImJ_G0016261.1 mouse_genomes_project 1 88553385 88566069 + MGP_129S1SvImJ_P0021110 Eif4e2 protein_coding protein_coding MGP_129S1SvImJ_T0021111.1 MGP_129S1SvImJ_G0016261.1 mouse_genomes_project 1 88553425 88565342 + MGP_129S1SvImJ_P0021111 Eif4e2 protein_coding protein_coding MGP_129S1SvImJ_T0021112.1 MGP_129S1SvImJ_G0016261.1 mouse_genomes_project 1 88553732 88567533 + MGP_129S1SvImJ_P0021112 Eif4e2 protein_coding protein_coding MGP_129S1SvImJ_T0020640.1 MGP_129S1SvImJ_G0016174.1 mouse_genomes_project 1 75733957 75742631 - MGP_129S1SvImJ_P0020640 Abcb6 protein_coding protein_coding MGP_129S1SvImJ_T0020641.1 MGP_129S1SvImJ_G0016174.1 mouse_genomes_project 1 75733959 75742525 - Abcb6 protein_coding retained_intron MGP_129S1SvImJ_T0020642.1 MGP_129S1SvImJ_G0016174.1 mouse_genomes_project 1 75733998 75735110 - MGP_129S1SvImJ_P0020642 Abcb6 protein_coding protein_coding MGP_129S1SvImJ_T0020643.1 MGP_129S1SvImJ_G0016174.1 mouse_genomes_project 1 75734960 75742525 - Abcb6 protein_coding retained_intron MGP_129S1SvImJ_T0020644.1 MGP_129S1SvImJ_G0016174.1 mouse_genomes_project 1 75737791 75741188 - Abcb6 protein_coding retained_intron MGP_129S1SvImJ_T0020645.1 MGP_129S1SvImJ_G0016174.1 mouse_genomes_project 1 75740148 75742615 - Abcb6 protein_coding retained_intron MGP_129S1SvImJ_T0020310.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66425945 66634289 + MGP_129S1SvImJ_P0020310 protein_coding protein_coding MGP_129S1SvImJ_T0020311.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66425985 66704892 + MGP_129S1SvImJ_P0020311 protein_coding protein_coding MGP_129S1SvImJ_T0020312.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66425988 66705450 + MGP_129S1SvImJ_P0020312 protein_coding protein_coding MGP_129S1SvImJ_T0020313.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66426137 66574180 + protein_coding processed_transcript MGP_129S1SvImJ_T0020314.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66426216 66450125 + protein_coding processed_transcript MGP_129S1SvImJ_T0020315.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66508093 66705448 + MGP_129S1SvImJ_P0020315 protein_coding protein_coding MGP_129S1SvImJ_T0020316.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66508108 66705448 + MGP_129S1SvImJ_P0020316 protein_coding protein_coding MGP_129S1SvImJ_T0020317.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66573459 66702052 + MGP_129S1SvImJ_P0020317 protein_coding protein_coding MGP_129S1SvImJ_T0020318.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66573576 66660172 + protein_coding retained_intron MGP_129S1SvImJ_T0020319.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66573738 66634963 + protein_coding retained_intron MGP_129S1SvImJ_T0020320.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66573842 66657528 + MGP_129S1SvImJ_P0020320 protein_coding protein_coding MGP_129S1SvImJ_T0020321.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66618364 66705450 + MGP_129S1SvImJ_P0020321 protein_coding protein_coding MGP_129S1SvImJ_T0020322.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66618367 66705450 + MGP_129S1SvImJ_P0020322 protein_coding protein_coding MGP_129S1SvImJ_T0020323.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66634183 66669582 + MGP_129S1SvImJ_P0020323 protein_coding protein_coding MGP_129S1SvImJ_T0020324.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66634373 66669111 + MGP_129S1SvImJ_P0020324 protein_coding protein_coding MGP_129S1SvImJ_T0020325.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66640612 66702820 + protein_coding processed_transcript MGP_129S1SvImJ_T0020326.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66640645 66670432 + MGP_129S1SvImJ_P0020326 protein_coding protein_coding MGP_129S1SvImJ_T0020327.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66640652 66664433 + protein_coding processed_transcript MGP_129S1SvImJ_T0020328.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66640678 66657617 + protein_coding retained_intron MGP_129S1SvImJ_T0020329.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66671441 66686995 + protein_coding processed_transcript MGP_129S1SvImJ_T0020330.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66672291 66701168 + MGP_129S1SvImJ_P0020330 protein_coding protein_coding MGP_129S1SvImJ_T0020331.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66672291 66701168 + MGP_129S1SvImJ_P0020331 protein_coding protein_coding MGP_129S1SvImJ_T0020332.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66672982 66701145 + MGP_129S1SvImJ_P0020332 protein_coding protein_coding MGP_129S1SvImJ_T0020333.1 MGP_129S1SvImJ_G0016112.1 mouse_genomes_project 1 66695092 66702317 + MGP_129S1SvImJ_P0020333 protein_coding protein_coding MGP_129S1SvImJ_T0023788.1 MGP_129S1SvImJ_G0016853.1 mouse_genomes_project 1 184604624 184607939 + Cox20 protein_coding retained_intron MGP_129S1SvImJ_T0023789.1 MGP_129S1SvImJ_G0016853.1 mouse_genomes_project 1 184604624 184608297 + MGP_129S1SvImJ_P0023789 Cox20 protein_coding protein_coding MGP_129S1SvImJ_T0011966.1 MGP_129S1SvImJ_G0010055.1 mouse_genomes_project 1 29820446 29822307 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021007.1 MGP_129S1SvImJ_G0016236.1 mouse_genomes_project 1 87113612 87128008 + MGP_129S1SvImJ_P0021007 Itm2c protein_coding protein_coding MGP_129S1SvImJ_T0021008.1 MGP_129S1SvImJ_G0016236.1 mouse_genomes_project 1 87113950 87127692 + MGP_129S1SvImJ_P0021008 Itm2c protein_coding protein_coding MGP_129S1SvImJ_T0021009.1 MGP_129S1SvImJ_G0016236.1 mouse_genomes_project 1 87125493 87127124 + Itm2c protein_coding retained_intron MGP_129S1SvImJ_T0000438.1 MGP_129S1SvImJ_G0000378.1 mouse_genomes_project 1 23493530 23496400 - TEC TEC MGP_129S1SvImJ_T0099136.1 MGP_129S1SvImJ_G0037203.1 mouse_genomes_project 1 177303789 177303905 - Gm24871 snRNA snRNA MGP_129S1SvImJ_T0019146.1 MGP_129S1SvImJ_G0015892.1 mouse_genomes_project 1 22943437 23110731 - MGP_129S1SvImJ_P0019146 Adgrb3 protein_coding protein_coding MGP_129S1SvImJ_T0019147.1 MGP_129S1SvImJ_G0015892.1 mouse_genomes_project 1 22943511 23723232 - MGP_129S1SvImJ_P0019147 Adgrb3 protein_coding protein_coding MGP_129S1SvImJ_T0019148.1 MGP_129S1SvImJ_G0015892.1 mouse_genomes_project 1 22943511 23726609 - MGP_129S1SvImJ_P0019148 Adgrb3 protein_coding protein_coding MGP_129S1SvImJ_T0019149.1 MGP_129S1SvImJ_G0015892.1 mouse_genomes_project 1 22943511 23726800 - MGP_129S1SvImJ_P0019149 Adgrb3 protein_coding protein_coding MGP_129S1SvImJ_T0019150.1 MGP_129S1SvImJ_G0015892.1 mouse_genomes_project 1 22943639 23723853 - MGP_129S1SvImJ_P0019150 Adgrb3 protein_coding protein_coding MGP_129S1SvImJ_T0019151.1 MGP_129S1SvImJ_G0015892.1 mouse_genomes_project 1 22943652 23111005 - Adgrb3 protein_coding retained_intron MGP_129S1SvImJ_T0019152.1 MGP_129S1SvImJ_G0015892.1 mouse_genomes_project 1 22968451 23110951 - Adgrb3 protein_coding retained_intron MGP_129S1SvImJ_T0019153.1 MGP_129S1SvImJ_G0015892.1 mouse_genomes_project 1 23008981 23084875 - Adgrb3 protein_coding processed_transcript MGP_129S1SvImJ_T0019154.1 MGP_129S1SvImJ_G0015892.1 mouse_genomes_project 1 23082021 23085848 - Adgrb3 protein_coding retained_intron MGP_129S1SvImJ_T0019155.1 MGP_129S1SvImJ_G0015892.1 mouse_genomes_project 1 23098889 23110732 - Adgrb3 protein_coding retained_intron MGP_129S1SvImJ_T0019156.1 MGP_129S1SvImJ_G0015892.1 mouse_genomes_project 1 23376688 23723440 - Adgrb3 protein_coding retained_intron MGP_129S1SvImJ_T0005926.1 MGP_129S1SvImJ_G0004971.1 mouse_genomes_project 1 137597780 137608428 + Gm1627 lincRNA lincRNA MGP_129S1SvImJ_T0012267.1 MGP_129S1SvImJ_G0010356.1 mouse_genomes_project 1 142202974 142203458 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012276.1 MGP_129S1SvImJ_G0010365.1 mouse_genomes_project 1 144171043 144179895 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000484.1 MGP_129S1SvImJ_G0000423.1 mouse_genomes_project 1 39379674 39383582 - TEC TEC MGP_129S1SvImJ_T0023644.1 MGP_129S1SvImJ_G0016805.1 mouse_genomes_project 1 179198062 179201978 - MGP_129S1SvImJ_P0023644 protein_coding protein_coding MGP_129S1SvImJ_T0022956.1 MGP_129S1SvImJ_G0016646.1 mouse_genomes_project 1 166254629 166285948 - MGP_129S1SvImJ_P0022956 Zbtb37 protein_coding protein_coding MGP_129S1SvImJ_T0022957.1 MGP_129S1SvImJ_G0016646.1 mouse_genomes_project 1 166260492 166285948 - MGP_129S1SvImJ_P0022957 Zbtb37 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022958.1 MGP_129S1SvImJ_G0016646.1 mouse_genomes_project 1 166260498 166285933 - MGP_129S1SvImJ_P0022958 Zbtb37 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022959.1 MGP_129S1SvImJ_G0016646.1 mouse_genomes_project 1 166269478 166285361 - MGP_129S1SvImJ_P0022959 Zbtb37 protein_coding protein_coding MGP_129S1SvImJ_T0022960.1 MGP_129S1SvImJ_G0016646.1 mouse_genomes_project 1 166270982 166285947 - MGP_129S1SvImJ_P0022960 Zbtb37 protein_coding protein_coding MGP_129S1SvImJ_T0022961.1 MGP_129S1SvImJ_G0016646.1 mouse_genomes_project 1 166271146 166285386 - MGP_129S1SvImJ_P0022961 Zbtb37 protein_coding protein_coding MGP_129S1SvImJ_T0022962.1 MGP_129S1SvImJ_G0016646.1 mouse_genomes_project 1 166283537 166285915 - MGP_129S1SvImJ_P0022962 Zbtb37 protein_coding protein_coding MGP_129S1SvImJ_T0005925.1 MGP_129S1SvImJ_G0004970.1 mouse_genomes_project 1 137462820 137466916 + Gm28441 lincRNA lincRNA MGP_129S1SvImJ_T0000410.1 MGP_129S1SvImJ_G0000352.1 mouse_genomes_project 1 10728226 10730476 - TEC TEC MGP_129S1SvImJ_T0099095.1 MGP_129S1SvImJ_G0037162.1 mouse_genomes_project 1 78598885 78599049 - Gm26263 snRNA snRNA MGP_129S1SvImJ_T0012033.1 MGP_129S1SvImJ_G0010122.1 mouse_genomes_project 1 48641178 48642171 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000459.1 MGP_129S1SvImJ_G0000399.1 mouse_genomes_project 1 31977367 31980239 - TEC TEC MGP_129S1SvImJ_T0020171.1 MGP_129S1SvImJ_G0016080.1 mouse_genomes_project 1 60966145 60992938 + Ctla4 protein_coding processed_transcript MGP_129S1SvImJ_T0020172.1 MGP_129S1SvImJ_G0016080.1 mouse_genomes_project 1 60989246 60996050 + MGP_129S1SvImJ_P0020172 Ctla4 protein_coding protein_coding MGP_129S1SvImJ_T0020173.1 MGP_129S1SvImJ_G0016080.1 mouse_genomes_project 1 60989392 60994987 + MGP_129S1SvImJ_P0020173 Ctla4 protein_coding protein_coding MGP_129S1SvImJ_T0099109.1 MGP_129S1SvImJ_G0037176.1 mouse_genomes_project 1 122279586 122279690 + Gm25322 snRNA snRNA MGP_129S1SvImJ_T0012266.1 MGP_129S1SvImJ_G0010355.1 mouse_genomes_project 1 140682887 140683431 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000684.1 MGP_129S1SvImJ_G0000621.1 mouse_genomes_project 1 143001110 143003490 - TEC TEC MGP_129S1SvImJ_T0000633.1 MGP_129S1SvImJ_G0000572.1 mouse_genomes_project 1 129471936 129472951 - TEC TEC MGP_129S1SvImJ_T0021010.1 MGP_129S1SvImJ_G0016237.1 mouse_genomes_project 1 87150183 87153455 + MGP_129S1SvImJ_P0021010 4933407L21Rik protein_coding protein_coding MGP_129S1SvImJ_T0021011.1 MGP_129S1SvImJ_G0016237.1 mouse_genomes_project 1 87150427 87163580 + MGP_129S1SvImJ_P0021011 4933407L21Rik protein_coding protein_coding MGP_129S1SvImJ_T0021012.1 MGP_129S1SvImJ_G0016237.1 mouse_genomes_project 1 87150586 87153455 + 4933407L21Rik protein_coding retained_intron MGP_129S1SvImJ_T0011958.1 MGP_129S1SvImJ_G0010047.1 mouse_genomes_project 1 27041527 27041834 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012182.1 MGP_129S1SvImJ_G0010271.1 mouse_genomes_project 1 107421034 107421360 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000714.1 MGP_129S1SvImJ_G0000651.1 mouse_genomes_project 1 160823702 160824447 - TEC TEC MGP_129S1SvImJ_T0102086.1 MGP_129S1SvImJ_G0039921.1 mouse_genomes_project 1 164332386 164334393 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0020430.1 MGP_129S1SvImJ_G0016131.1 mouse_genomes_project 1 72807744 72898397 + MGP_129S1SvImJ_P0020430 Xrcc5 protein_coding protein_coding MGP_129S1SvImJ_T0102107.1 MGP_129S1SvImJ_G0039942.1 mouse_genomes_project 1 187508037 187508148 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0021034.1 MGP_129S1SvImJ_G0016242.1 mouse_genomes_project 1 87338019 87350963 - MGP_129S1SvImJ_P0021034 Htr2b protein_coding protein_coding MGP_129S1SvImJ_T0021035.1 MGP_129S1SvImJ_G0016242.1 mouse_genomes_project 1 87339094 87349665 - MGP_129S1SvImJ_P0021035 Htr2b protein_coding protein_coding MGP_129S1SvImJ_T0024085.1 MGP_129S1SvImJ_G0016915.1 mouse_genomes_project 1 192053673 192078438 + MGP_129S1SvImJ_P0024085 Bpnt1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0024086.1 MGP_129S1SvImJ_G0016915.1 mouse_genomes_project 1 192053686 192087984 + MGP_129S1SvImJ_P0024086 Bpnt1 protein_coding protein_coding MGP_129S1SvImJ_T0024087.1 MGP_129S1SvImJ_G0016915.1 mouse_genomes_project 1 192053710 192067152 + MGP_129S1SvImJ_P0024087 Bpnt1 protein_coding protein_coding MGP_129S1SvImJ_T0024088.1 MGP_129S1SvImJ_G0016915.1 mouse_genomes_project 1 192053717 192084755 + MGP_129S1SvImJ_P0024088 Bpnt1 protein_coding protein_coding MGP_129S1SvImJ_T0024089.1 MGP_129S1SvImJ_G0016915.1 mouse_genomes_project 1 192053744 192068492 + Bpnt1 protein_coding processed_transcript MGP_129S1SvImJ_T0022631.1 MGP_129S1SvImJ_G0016587.1 mouse_genomes_project 1 157164837 157271836 + MGP_129S1SvImJ_P0022631 Colgalt2 protein_coding protein_coding MGP_129S1SvImJ_T0022632.1 MGP_129S1SvImJ_G0016587.1 mouse_genomes_project 1 157164837 157270959 + MGP_129S1SvImJ_P0022632 Colgalt2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0098798.1 MGP_129S1SvImJ_G0036882.1 mouse_genomes_project 1 170938053 170941128 - Gm37864 sense_intronic sense_intronic MGP_129S1SvImJ_T0012176.1 MGP_129S1SvImJ_G0010265.1 mouse_genomes_project 1 103810552 103810788 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021027.1 MGP_129S1SvImJ_G0016241.1 mouse_genomes_project 1 87301354 87308297 + protein_coding retained_intron MGP_129S1SvImJ_T0021028.1 MGP_129S1SvImJ_G0016241.1 mouse_genomes_project 1 87301354 87309181 + protein_coding processed_transcript MGP_129S1SvImJ_T0021029.1 MGP_129S1SvImJ_G0016241.1 mouse_genomes_project 1 87301587 87371592 + MGP_129S1SvImJ_P0021029 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021030.1 MGP_129S1SvImJ_G0016241.1 mouse_genomes_project 1 87301587 87377911 + MGP_129S1SvImJ_P0021030 protein_coding protein_coding MGP_129S1SvImJ_T0021031.1 MGP_129S1SvImJ_G0016241.1 mouse_genomes_project 1 87301609 87304631 + protein_coding retained_intron MGP_129S1SvImJ_T0021032.1 MGP_129S1SvImJ_G0016241.1 mouse_genomes_project 1 87301660 87309805 + protein_coding retained_intron MGP_129S1SvImJ_T0021033.1 MGP_129S1SvImJ_G0016241.1 mouse_genomes_project 1 87301839 87313717 + protein_coding processed_transcript MGP_129S1SvImJ_T0021036.1 MGP_129S1SvImJ_G0016241.1 mouse_genomes_project 1 87349809 87371643 + protein_coding processed_transcript MGP_129S1SvImJ_T0021037.1 MGP_129S1SvImJ_G0016241.1 mouse_genomes_project 1 87366829 87371610 + protein_coding retained_intron MGP_129S1SvImJ_T0000829.1 MGP_129S1SvImJ_G0000763.1 mouse_genomes_project 1 201829938 201833502 + TEC TEC MGP_129S1SvImJ_T0002984.1 MGP_129S1SvImJ_G0002804.1 mouse_genomes_project 1 186672182 186690943 + Gm31728 antisense antisense MGP_129S1SvImJ_T0023679.1 MGP_129S1SvImJ_G0016824.1 mouse_genomes_project 1 180165595 180166519 - MGP_129S1SvImJ_P0023679 Olfr231 protein_coding protein_coding MGP_129S1SvImJ_T0020863.1 MGP_129S1SvImJ_G0016208.1 mouse_genomes_project 1 80599310 80667685 - MGP_129S1SvImJ_P0020863 Serpine2 protein_coding protein_coding MGP_129S1SvImJ_T0020864.1 MGP_129S1SvImJ_G0016208.1 mouse_genomes_project 1 80601939 80629310 - MGP_129S1SvImJ_P0020864 Serpine2 protein_coding protein_coding MGP_129S1SvImJ_T0020865.1 MGP_129S1SvImJ_G0016208.1 mouse_genomes_project 1 80608179 80671110 - MGP_129S1SvImJ_P0020865 Serpine2 protein_coding protein_coding MGP_129S1SvImJ_T0020866.1 MGP_129S1SvImJ_G0016208.1 mouse_genomes_project 1 80621463 80668610 - Serpine2 protein_coding retained_intron MGP_129S1SvImJ_T0020867.1 MGP_129S1SvImJ_G0016208.1 mouse_genomes_project 1 80623263 80628292 - Serpine2 protein_coding retained_intron MGP_129S1SvImJ_T0020868.1 MGP_129S1SvImJ_G0016208.1 mouse_genomes_project 1 80666488 80667620 - Serpine2 protein_coding retained_intron MGP_129S1SvImJ_T0023951.1 MGP_129S1SvImJ_G0016885.1 mouse_genomes_project 1 187870562 187987673 + MGP_129S1SvImJ_P0023951 Cnih3 protein_coding protein_coding MGP_129S1SvImJ_T0023952.1 MGP_129S1SvImJ_G0016885.1 mouse_genomes_project 1 187870564 187988405 + MGP_129S1SvImJ_P0023952 Cnih3 protein_coding protein_coding MGP_129S1SvImJ_T0023953.1 MGP_129S1SvImJ_G0016885.1 mouse_genomes_project 1 187871132 187987051 + MGP_129S1SvImJ_P0023953 Cnih3 protein_coding protein_coding MGP_129S1SvImJ_T0000641.1 MGP_129S1SvImJ_G0000580.1 mouse_genomes_project 1 131389319 131390634 + TEC TEC MGP_129S1SvImJ_T0011950.1 MGP_129S1SvImJ_G0010039.1 mouse_genomes_project 1 23105634 23106078 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021402.1 MGP_129S1SvImJ_G0016328.1 mouse_genomes_project 1 94512217 94513672 + MGP_129S1SvImJ_P0021402 Dusp28 protein_coding protein_coding MGP_129S1SvImJ_T0019769.1 MGP_129S1SvImJ_G0016008.1 mouse_genomes_project 1 51964992 52012123 - MGP_129S1SvImJ_P0019769 Nab1 protein_coding protein_coding MGP_129S1SvImJ_T0019770.1 MGP_129S1SvImJ_G0016008.1 mouse_genomes_project 1 51964992 52010169 - MGP_129S1SvImJ_P0019770 Nab1 protein_coding protein_coding MGP_129S1SvImJ_T0019771.1 MGP_129S1SvImJ_G0016008.1 mouse_genomes_project 1 51966916 52000599 - MGP_129S1SvImJ_P0019771 Nab1 protein_coding protein_coding MGP_129S1SvImJ_T0019772.1 MGP_129S1SvImJ_G0016008.1 mouse_genomes_project 1 51966939 51976063 - Nab1 protein_coding retained_intron MGP_129S1SvImJ_T0019773.1 MGP_129S1SvImJ_G0016008.1 mouse_genomes_project 1 52000172 52010184 - Nab1 protein_coding processed_transcript MGP_129S1SvImJ_T0099063.1 MGP_129S1SvImJ_G0037130.1 mouse_genomes_project 1 7848944 7849051 - Gm25253 snRNA snRNA MGP_129S1SvImJ_T0012381.1 MGP_129S1SvImJ_G0010470.1 mouse_genomes_project 1 193874852 193875177 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021227.1 MGP_129S1SvImJ_G0016287.1 mouse_genomes_project 1 89924425 89934596 - MGP_129S1SvImJ_P0021227 Glrp1 protein_coding protein_coding MGP_129S1SvImJ_T0005665.1 MGP_129S1SvImJ_G0004770.1 mouse_genomes_project 1 4753867 4776386 + Gm30414 lincRNA lincRNA MGP_129S1SvImJ_T0099116.1 MGP_129S1SvImJ_G0037183.1 mouse_genomes_project 1 135567722 135567838 + Gm26034 snRNA snRNA MGP_129S1SvImJ_T0011960.1 MGP_129S1SvImJ_G0010049.1 mouse_genomes_project 1 28083423 28084509 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012124.1 MGP_129S1SvImJ_G0010213.1 mouse_genomes_project 1 80771628 80772106 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023966.1 MGP_129S1SvImJ_G0016889.1 mouse_genomes_project 1 188472348 188612600 - MGP_129S1SvImJ_P0023966 Enah protein_coding protein_coding MGP_129S1SvImJ_T0023967.1 MGP_129S1SvImJ_G0016889.1 mouse_genomes_project 1 188480278 188614442 - MGP_129S1SvImJ_P0023967 Enah protein_coding protein_coding MGP_129S1SvImJ_T0023968.1 MGP_129S1SvImJ_G0016889.1 mouse_genomes_project 1 188480325 188612670 - MGP_129S1SvImJ_P0023968 Enah protein_coding protein_coding MGP_129S1SvImJ_T0023969.1 MGP_129S1SvImJ_G0016889.1 mouse_genomes_project 1 188480325 188612670 - MGP_129S1SvImJ_P0023969 Enah protein_coding protein_coding MGP_129S1SvImJ_T0023970.1 MGP_129S1SvImJ_G0016889.1 mouse_genomes_project 1 188481204 188484291 - Enah protein_coding retained_intron MGP_129S1SvImJ_T0023971.1 MGP_129S1SvImJ_G0016889.1 mouse_genomes_project 1 188481358 188482725 - Enah protein_coding retained_intron MGP_129S1SvImJ_T0023972.1 MGP_129S1SvImJ_G0016889.1 mouse_genomes_project 1 188481386 188607382 - MGP_129S1SvImJ_P0023972 Enah protein_coding protein_coding MGP_129S1SvImJ_T0023973.1 MGP_129S1SvImJ_G0016889.1 mouse_genomes_project 1 188481393 188612600 - MGP_129S1SvImJ_P0023973 Enah protein_coding protein_coding MGP_129S1SvImJ_T0023974.1 MGP_129S1SvImJ_G0016889.1 mouse_genomes_project 1 188481393 188612600 - MGP_129S1SvImJ_P0023974 Enah protein_coding protein_coding MGP_129S1SvImJ_T0023975.1 MGP_129S1SvImJ_G0016889.1 mouse_genomes_project 1 188481393 188612600 - MGP_129S1SvImJ_P0023975 Enah protein_coding protein_coding MGP_129S1SvImJ_T0023976.1 MGP_129S1SvImJ_G0016889.1 mouse_genomes_project 1 188481588 188493473 - Enah protein_coding retained_intron MGP_129S1SvImJ_T0023977.1 MGP_129S1SvImJ_G0016889.1 mouse_genomes_project 1 188486594 188488484 - Enah protein_coding retained_intron MGP_129S1SvImJ_T0023978.1 MGP_129S1SvImJ_G0016889.1 mouse_genomes_project 1 188495563 188499877 - MGP_129S1SvImJ_P0023978 Enah protein_coding protein_coding MGP_129S1SvImJ_T0023979.1 MGP_129S1SvImJ_G0016889.1 mouse_genomes_project 1 188499311 188543546 - Enah protein_coding retained_intron MGP_129S1SvImJ_T0023980.1 MGP_129S1SvImJ_G0016889.1 mouse_genomes_project 1 188516347 188524081 - Enah protein_coding retained_intron MGP_129S1SvImJ_T0023981.1 MGP_129S1SvImJ_G0016889.1 mouse_genomes_project 1 188543144 188612615 - Enah protein_coding retained_intron MGP_129S1SvImJ_T0005857.1 MGP_129S1SvImJ_G0004915.1 mouse_genomes_project 1 93152484 93165945 + Gm28380 lincRNA lincRNA MGP_129S1SvImJ_T0100389.1 MGP_129S1SvImJ_G0038456.1 mouse_genomes_project 1 166288078 166288144 + Snord78 snoRNA snoRNA MGP_129S1SvImJ_T0012002.1 MGP_129S1SvImJ_G0010091.1 mouse_genomes_project 1 42402336 42402716 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000578.1 MGP_129S1SvImJ_G0000517.1 mouse_genomes_project 1 88193344 88195655 + TEC TEC MGP_129S1SvImJ_T0005796.1 MGP_129S1SvImJ_G0004866.1 mouse_genomes_project 1 72425689 72473780 - 4933417E11Rik lincRNA lincRNA MGP_129S1SvImJ_T0101592.1 MGP_129S1SvImJ_G0039647.1 mouse_genomes_project 1 186746474 186753116 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101593.1 MGP_129S1SvImJ_G0039647.1 mouse_genomes_project 1 186746678 186749522 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0003022.1 MGP_129S1SvImJ_G0002832.1 mouse_genomes_project 1 200276038 200281144 + Gm15872 antisense antisense MGP_129S1SvImJ_T0018964.1 MGP_129S1SvImJ_G0015845.1 mouse_genomes_project 1 11559078 11717286 - MGP_129S1SvImJ_P0018964 Eya1 protein_coding protein_coding MGP_129S1SvImJ_T0018965.1 MGP_129S1SvImJ_G0015845.1 mouse_genomes_project 1 11559082 11717321 - MGP_129S1SvImJ_P0018965 Eya1 protein_coding protein_coding MGP_129S1SvImJ_T0018966.1 MGP_129S1SvImJ_G0015845.1 mouse_genomes_project 1 11559790 11717205 - MGP_129S1SvImJ_P0018966 Eya1 protein_coding protein_coding MGP_129S1SvImJ_T0018967.1 MGP_129S1SvImJ_G0015845.1 mouse_genomes_project 1 11560759 11711637 - MGP_129S1SvImJ_P0018967 Eya1 protein_coding protein_coding MGP_129S1SvImJ_T0018968.1 MGP_129S1SvImJ_G0015845.1 mouse_genomes_project 1 11605350 11633443 - MGP_129S1SvImJ_P0018968 Eya1 protein_coding protein_coding MGP_129S1SvImJ_T0018969.1 MGP_129S1SvImJ_G0015845.1 mouse_genomes_project 1 11655551 11711686 - MGP_129S1SvImJ_P0018969 Eya1 protein_coding protein_coding MGP_129S1SvImJ_T0018970.1 MGP_129S1SvImJ_G0015845.1 mouse_genomes_project 1 11674319 11711695 - MGP_129S1SvImJ_P0018970 Eya1 protein_coding protein_coding MGP_129S1SvImJ_T0018971.1 MGP_129S1SvImJ_G0015845.1 mouse_genomes_project 1 11674387 11716922 - MGP_129S1SvImJ_P0018971 Eya1 protein_coding protein_coding MGP_129S1SvImJ_T0018972.1 MGP_129S1SvImJ_G0015845.1 mouse_genomes_project 1 11708277 11717137 - Eya1 protein_coding retained_intron MGP_129S1SvImJ_T0023481.1 MGP_129S1SvImJ_G0016760.1 mouse_genomes_project 1 177189609 177211762 + Arhgap30 protein_coding retained_intron MGP_129S1SvImJ_T0023482.1 MGP_129S1SvImJ_G0016760.1 mouse_genomes_project 1 177189609 177211704 + Arhgap30 protein_coding retained_intron MGP_129S1SvImJ_T0023483.1 MGP_129S1SvImJ_G0016760.1 mouse_genomes_project 1 177189609 177211704 + MGP_129S1SvImJ_P0023483 Arhgap30 protein_coding protein_coding MGP_129S1SvImJ_T0023484.1 MGP_129S1SvImJ_G0016760.1 mouse_genomes_project 1 177189654 177193471 + Arhgap30 protein_coding retained_intron MGP_129S1SvImJ_T0023352.1 MGP_129S1SvImJ_G0016735.1 mouse_genomes_project 1 176632286 176633108 + MGP_129S1SvImJ_P0023352 Gm26620 protein_coding protein_coding MGP_129S1SvImJ_T0000393.1 MGP_129S1SvImJ_G0000335.1 mouse_genomes_project 1 5866068 5867226 - TEC TEC MGP_129S1SvImJ_T0009533.1 MGP_129S1SvImJ_G0007649.1 mouse_genomes_project 1 98016750 98016860 + Gm22917 miRNA miRNA MGP_129S1SvImJ_T0002787.1 MGP_129S1SvImJ_G0002651.1 mouse_genomes_project 1 16661575 16706275 - Gm15825 antisense antisense MGP_129S1SvImJ_T0000520.1 MGP_129S1SvImJ_G0000459.1 mouse_genomes_project 1 61898163 61899083 + TEC TEC MGP_129S1SvImJ_T0021525.1 MGP_129S1SvImJ_G0016349.1 mouse_genomes_project 1 95437023 95449844 - MGP_129S1SvImJ_P0021525 Dtymk protein_coding protein_coding MGP_129S1SvImJ_T0021526.1 MGP_129S1SvImJ_G0016349.1 mouse_genomes_project 1 95437171 95446641 - MGP_129S1SvImJ_P0021526 Dtymk protein_coding protein_coding MGP_129S1SvImJ_T0021527.1 MGP_129S1SvImJ_G0016349.1 mouse_genomes_project 1 95446019 95447001 - Dtymk protein_coding processed_transcript MGP_129S1SvImJ_T0021528.1 MGP_129S1SvImJ_G0016349.1 mouse_genomes_project 1 95447754 95449816 - MGP_129S1SvImJ_P0021528 Dtymk protein_coding protein_coding MGP_129S1SvImJ_T0022949.1 MGP_129S1SvImJ_G0016645.1 mouse_genomes_project 1 166226111 166229315 + Serpinc1 protein_coding retained_intron MGP_129S1SvImJ_T0022950.1 MGP_129S1SvImJ_G0016645.1 mouse_genomes_project 1 166226132 166246606 + MGP_129S1SvImJ_P0022950 Serpinc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022951.1 MGP_129S1SvImJ_G0016645.1 mouse_genomes_project 1 166226214 166238076 + MGP_129S1SvImJ_P0022951 Serpinc1 protein_coding protein_coding MGP_129S1SvImJ_T0022952.1 MGP_129S1SvImJ_G0016645.1 mouse_genomes_project 1 166233195 166246635 + MGP_129S1SvImJ_P0022952 Serpinc1 protein_coding protein_coding MGP_129S1SvImJ_T0022953.1 MGP_129S1SvImJ_G0016645.1 mouse_genomes_project 1 166235504 166238166 + Serpinc1 protein_coding retained_intron MGP_129S1SvImJ_T0022954.1 MGP_129S1SvImJ_G0016645.1 mouse_genomes_project 1 166235960 166258690 + MGP_129S1SvImJ_P0022954 Serpinc1 protein_coding protein_coding MGP_129S1SvImJ_T0022955.1 MGP_129S1SvImJ_G0016645.1 mouse_genomes_project 1 166237794 166254177 + MGP_129S1SvImJ_P0022955 Serpinc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018941.1 MGP_129S1SvImJ_G0015839.1 mouse_genomes_project 1 10204534 10336364 - MGP_129S1SvImJ_P0018941 Slco5a1 protein_coding protein_coding MGP_129S1SvImJ_T0018942.1 MGP_129S1SvImJ_G0015839.1 mouse_genomes_project 1 10212361 10336783 - MGP_129S1SvImJ_P0018942 Slco5a1 protein_coding protein_coding MGP_129S1SvImJ_T0018943.1 MGP_129S1SvImJ_G0015839.1 mouse_genomes_project 1 10212361 10336783 - MGP_129S1SvImJ_P0018943 Slco5a1 protein_coding protein_coding MGP_129S1SvImJ_T0018944.1 MGP_129S1SvImJ_G0015839.1 mouse_genomes_project 1 10214003 10265645 - Slco5a1 protein_coding processed_transcript MGP_129S1SvImJ_T0018945.1 MGP_129S1SvImJ_G0015839.1 mouse_genomes_project 1 10318285 10337046 - Slco5a1 protein_coding processed_transcript MGP_129S1SvImJ_T0022098.1 MGP_129S1SvImJ_G0016477.1 mouse_genomes_project 1 136386652 136446111 + MGP_129S1SvImJ_P0022098 Lrrn2 protein_coding protein_coding MGP_129S1SvImJ_T0022099.1 MGP_129S1SvImJ_G0016477.1 mouse_genomes_project 1 136386734 136443256 + Lrrn2 protein_coding processed_transcript MGP_129S1SvImJ_T0012295.1 MGP_129S1SvImJ_G0010384.1 mouse_genomes_project 1 153789992 153791528 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098797.1 MGP_129S1SvImJ_G0036881.1 mouse_genomes_project 1 170710798 170716470 - Gm38190 sense_intronic sense_intronic MGP_129S1SvImJ_T0000431.1 MGP_129S1SvImJ_G0000371.1 mouse_genomes_project 1 23161131 23167144 - TEC TEC MGP_129S1SvImJ_T0098790.1 MGP_129S1SvImJ_G0036874.1 mouse_genomes_project 1 143019723 143021383 + 4930596I21Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0019808.1 MGP_129S1SvImJ_G0016015.1 mouse_genomes_project 1 52685409 52718591 - MGP_129S1SvImJ_P0019808 1700019A02Rik protein_coding protein_coding MGP_129S1SvImJ_T0019809.1 MGP_129S1SvImJ_G0016015.1 mouse_genomes_project 1 52685432 52718563 - MGP_129S1SvImJ_P0019809 1700019A02Rik protein_coding protein_coding MGP_129S1SvImJ_T0002978.1 MGP_129S1SvImJ_G0002799.1 mouse_genomes_project 1 183075606 183080316 - Gm15423 antisense antisense MGP_129S1SvImJ_T0022068.1 MGP_129S1SvImJ_G0016472.1 mouse_genomes_project 1 135902319 135951572 + MGP_129S1SvImJ_P0022068 Dstyk protein_coding protein_coding MGP_129S1SvImJ_T0022069.1 MGP_129S1SvImJ_G0016472.1 mouse_genomes_project 1 135902368 135948709 + MGP_129S1SvImJ_P0022069 Dstyk protein_coding protein_coding MGP_129S1SvImJ_T0022070.1 MGP_129S1SvImJ_G0016472.1 mouse_genomes_project 1 135903141 135918751 + Dstyk protein_coding processed_transcript MGP_129S1SvImJ_T0022071.1 MGP_129S1SvImJ_G0016472.1 mouse_genomes_project 1 135934043 135936257 + MGP_129S1SvImJ_P0022071 Dstyk protein_coding protein_coding MGP_129S1SvImJ_T0022072.1 MGP_129S1SvImJ_G0016472.1 mouse_genomes_project 1 135939231 135942286 + Dstyk protein_coding retained_intron MGP_129S1SvImJ_T0022073.1 MGP_129S1SvImJ_G0016472.1 mouse_genomes_project 1 135947025 135947973 + Dstyk protein_coding retained_intron MGP_129S1SvImJ_T0000805.1 MGP_129S1SvImJ_G0000740.1 mouse_genomes_project 1 192852974 192853167 - TEC TEC MGP_129S1SvImJ_T0024338.1 MGP_129S1SvImJ_G0016962.1 mouse_genomes_project 1 200311617 200336270 - MGP_129S1SvImJ_P0024338 Hsd11b1 protein_coding protein_coding MGP_129S1SvImJ_T0024339.1 MGP_129S1SvImJ_G0016962.1 mouse_genomes_project 1 200311665 200335239 - MGP_129S1SvImJ_P0024339 Hsd11b1 protein_coding protein_coding MGP_129S1SvImJ_T0024340.1 MGP_129S1SvImJ_G0016962.1 mouse_genomes_project 1 200311672 200360139 - MGP_129S1SvImJ_P0024340 Hsd11b1 protein_coding protein_coding MGP_129S1SvImJ_T0024341.1 MGP_129S1SvImJ_G0016962.1 mouse_genomes_project 1 200313624 200337202 - MGP_129S1SvImJ_P0024341 Hsd11b1 protein_coding protein_coding MGP_129S1SvImJ_T0024342.1 MGP_129S1SvImJ_G0016962.1 mouse_genomes_project 1 200321966 200334051 - MGP_129S1SvImJ_P0024342 Hsd11b1 protein_coding protein_coding MGP_129S1SvImJ_T0024343.1 MGP_129S1SvImJ_G0016962.1 mouse_genomes_project 1 200330686 200332664 - Hsd11b1 protein_coding retained_intron MGP_129S1SvImJ_T0024344.1 MGP_129S1SvImJ_G0016962.1 mouse_genomes_project 1 200331914 200335065 - Hsd11b1 protein_coding processed_transcript MGP_129S1SvImJ_T0020534.1 MGP_129S1SvImJ_G0016154.1 mouse_genomes_project 1 75151155 75176568 + MGP_129S1SvImJ_P0020534 Plcd4 protein_coding protein_coding MGP_129S1SvImJ_T0020535.1 MGP_129S1SvImJ_G0016154.1 mouse_genomes_project 1 75151155 75176568 + MGP_129S1SvImJ_P0020535 Plcd4 protein_coding protein_coding MGP_129S1SvImJ_T0020536.1 MGP_129S1SvImJ_G0016154.1 mouse_genomes_project 1 75151155 75176568 + MGP_129S1SvImJ_P0020536 Plcd4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020537.1 MGP_129S1SvImJ_G0016154.1 mouse_genomes_project 1 75151170 75169371 + Plcd4 protein_coding retained_intron MGP_129S1SvImJ_T0020538.1 MGP_129S1SvImJ_G0016154.1 mouse_genomes_project 1 75151170 75174751 + MGP_129S1SvImJ_P0020538 Plcd4 protein_coding protein_coding MGP_129S1SvImJ_T0020539.1 MGP_129S1SvImJ_G0016154.1 mouse_genomes_project 1 75151170 75174751 + MGP_129S1SvImJ_P0020539 Plcd4 protein_coding protein_coding MGP_129S1SvImJ_T0020540.1 MGP_129S1SvImJ_G0016154.1 mouse_genomes_project 1 75152628 75154540 + Plcd4 protein_coding retained_intron MGP_129S1SvImJ_T0020541.1 MGP_129S1SvImJ_G0016154.1 mouse_genomes_project 1 75152632 75174751 + MGP_129S1SvImJ_P0020541 Plcd4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020542.1 MGP_129S1SvImJ_G0016154.1 mouse_genomes_project 1 75152632 75174751 + MGP_129S1SvImJ_P0020542 Plcd4 protein_coding protein_coding MGP_129S1SvImJ_T0020543.1 MGP_129S1SvImJ_G0016154.1 mouse_genomes_project 1 75169191 75174075 + Plcd4 protein_coding processed_transcript MGP_129S1SvImJ_T0020544.1 MGP_129S1SvImJ_G0016154.1 mouse_genomes_project 1 75173209 75174400 + Plcd4 protein_coding retained_intron MGP_129S1SvImJ_T0005708.1 MGP_129S1SvImJ_G0004806.1 mouse_genomes_project 1 36796826 36824611 + Gm5099 lincRNA lincRNA MGP_129S1SvImJ_T0009538.1 MGP_129S1SvImJ_G0007654.1 mouse_genomes_project 1 118975938 118976010 - Gm23393 miRNA miRNA MGP_129S1SvImJ_T0005744.1 MGP_129S1SvImJ_G0004826.1 mouse_genomes_project 1 50389500 50390951 + Gm28322 lincRNA lincRNA MGP_129S1SvImJ_T0005927.1 MGP_129S1SvImJ_G0004972.1 mouse_genomes_project 1 138095166 138099131 + Platr1 lincRNA lincRNA MGP_129S1SvImJ_T0022582.1 MGP_129S1SvImJ_G0016579.1 mouse_genomes_project 1 156066618 156088672 + MGP_129S1SvImJ_P0022582 Ivns1abp protein_coding protein_coding MGP_129S1SvImJ_T0022583.1 MGP_129S1SvImJ_G0016579.1 mouse_genomes_project 1 156066650 156081053 + MGP_129S1SvImJ_P0022583 Ivns1abp protein_coding protein_coding MGP_129S1SvImJ_T0022584.1 MGP_129S1SvImJ_G0016579.1 mouse_genomes_project 1 156066659 156088665 + MGP_129S1SvImJ_P0022584 Ivns1abp protein_coding protein_coding MGP_129S1SvImJ_T0022585.1 MGP_129S1SvImJ_G0016579.1 mouse_genomes_project 1 156066725 156087615 + MGP_129S1SvImJ_P0022585 Ivns1abp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022586.1 MGP_129S1SvImJ_G0016579.1 mouse_genomes_project 1 156085495 156086283 + MGP_129S1SvImJ_P0022586 Ivns1abp protein_coding protein_coding MGP_129S1SvImJ_T0023130.1 MGP_129S1SvImJ_G0016682.1 mouse_genomes_project 1 169711566 169723825 + MGP_129S1SvImJ_P0023130 Ccdc181 protein_coding protein_coding MGP_129S1SvImJ_T0102045.1 MGP_129S1SvImJ_G0039880.1 mouse_genomes_project 1 18973380 18977184 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0021646.1 MGP_129S1SvImJ_G0016381.1 mouse_genomes_project 1 109642931 109682334 + MGP_129S1SvImJ_P0021646 Serpinb7 protein_coding protein_coding MGP_129S1SvImJ_T0021647.1 MGP_129S1SvImJ_G0016381.1 mouse_genomes_project 1 109669372 109700068 + MGP_129S1SvImJ_P0021647 Serpinb7 protein_coding protein_coding MGP_129S1SvImJ_T0011914.1 MGP_129S1SvImJ_G0010003.1 mouse_genomes_project 1 9980480 9981167 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022518.1 MGP_129S1SvImJ_G0016566.1 mouse_genomes_project 1 148493965 148534550 - MGP_129S1SvImJ_P0022518 Rgs13 protein_coding protein_coding MGP_129S1SvImJ_T0022519.1 MGP_129S1SvImJ_G0016566.1 mouse_genomes_project 1 148493978 148534453 - MGP_129S1SvImJ_P0022519 Rgs13 protein_coding protein_coding MGP_129S1SvImJ_T0021203.1 MGP_129S1SvImJ_G0016276.1 mouse_genomes_project 1 89491878 89619897 + MGP_129S1SvImJ_P0021203 protein_coding protein_coding MGP_129S1SvImJ_T0021211.1 MGP_129S1SvImJ_G0016276.1 mouse_genomes_project 1 89615527 89628377 + MGP_129S1SvImJ_P0021211 protein_coding protein_coding MGP_129S1SvImJ_T0102052.1 MGP_129S1SvImJ_G0039887.1 mouse_genomes_project 1 58943818 58952444 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0018784.1 MGP_129S1SvImJ_G0015818.1 mouse_genomes_project 1 3387352 3417970 + MGP_129S1SvImJ_P0018784 Rb1cc1 protein_coding protein_coding MGP_129S1SvImJ_T0018785.1 MGP_129S1SvImJ_G0015818.1 mouse_genomes_project 1 3387382 3422043 + MGP_129S1SvImJ_P0018785 Rb1cc1 protein_coding protein_coding MGP_129S1SvImJ_T0018786.1 MGP_129S1SvImJ_G0015818.1 mouse_genomes_project 1 3395745 3458125 + MGP_129S1SvImJ_P0018786 Rb1cc1 protein_coding protein_coding MGP_129S1SvImJ_T0018787.1 MGP_129S1SvImJ_G0015818.1 mouse_genomes_project 1 3395818 3413252 + Rb1cc1 protein_coding retained_intron MGP_129S1SvImJ_T0018788.1 MGP_129S1SvImJ_G0015818.1 mouse_genomes_project 1 3396163 3417669 + MGP_129S1SvImJ_P0018788 Rb1cc1 protein_coding protein_coding MGP_129S1SvImJ_T0018789.1 MGP_129S1SvImJ_G0015818.1 mouse_genomes_project 1 3410375 3435285 + MGP_129S1SvImJ_P0018789 Rb1cc1 protein_coding protein_coding MGP_129S1SvImJ_T0018790.1 MGP_129S1SvImJ_G0015818.1 mouse_genomes_project 1 3424628 3434614 + Rb1cc1 protein_coding retained_intron MGP_129S1SvImJ_T0018791.1 MGP_129S1SvImJ_G0015818.1 mouse_genomes_project 1 3435343 3458340 + MGP_129S1SvImJ_P0018791 Rb1cc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018792.1 MGP_129S1SvImJ_G0015818.1 mouse_genomes_project 1 3436232 3437514 + Rb1cc1 protein_coding processed_transcript MGP_129S1SvImJ_T0018793.1 MGP_129S1SvImJ_G0015818.1 mouse_genomes_project 1 3436350 3450201 + Rb1cc1 protein_coding retained_intron MGP_129S1SvImJ_T0018794.1 MGP_129S1SvImJ_G0015818.1 mouse_genomes_project 1 3444997 3447245 + Rb1cc1 protein_coding retained_intron MGP_129S1SvImJ_T0018795.1 MGP_129S1SvImJ_G0015818.1 mouse_genomes_project 1 3447293 3449284 + Rb1cc1 protein_coding retained_intron MGP_129S1SvImJ_T0018796.1 MGP_129S1SvImJ_G0015818.1 mouse_genomes_project 1 3447323 3458339 + MGP_129S1SvImJ_P0018796 Rb1cc1 protein_coding protein_coding MGP_129S1SvImJ_T0018797.1 MGP_129S1SvImJ_G0015818.1 mouse_genomes_project 1 3449996 3457156 + Rb1cc1 protein_coding retained_intron MGP_129S1SvImJ_T0018798.1 MGP_129S1SvImJ_G0015818.1 mouse_genomes_project 1 3455068 3459425 + Rb1cc1 protein_coding retained_intron MGP_129S1SvImJ_T0002909.1 MGP_129S1SvImJ_G0002745.1 mouse_genomes_project 1 136783580 136804565 - Gm19461 antisense antisense MGP_129S1SvImJ_T0002910.1 MGP_129S1SvImJ_G0002745.1 mouse_genomes_project 1 136784390 136790310 - Gm19461 antisense antisense MGP_129S1SvImJ_T0002911.1 MGP_129S1SvImJ_G0002745.1 mouse_genomes_project 1 136787085 136787475 - Gm19461 antisense antisense MGP_129S1SvImJ_T0002912.1 MGP_129S1SvImJ_G0002745.1 mouse_genomes_project 1 136787465 136789544 - Gm19461 antisense antisense MGP_129S1SvImJ_T0002913.1 MGP_129S1SvImJ_G0002745.1 mouse_genomes_project 1 136789732 136791864 - Gm19461 antisense antisense MGP_129S1SvImJ_T0000621.1 MGP_129S1SvImJ_G0000560.1 mouse_genomes_project 1 125784400 125786413 + TEC TEC MGP_129S1SvImJ_T0012053.1 MGP_129S1SvImJ_G0010142.1 mouse_genomes_project 1 54848152 54850895 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099123.1 MGP_129S1SvImJ_G0037190.1 mouse_genomes_project 1 143914763 143914867 + Gm26271 snRNA snRNA MGP_129S1SvImJ_T0012350.1 MGP_129S1SvImJ_G0010439.1 mouse_genomes_project 1 177343789 177343959 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024271.1 MGP_129S1SvImJ_G0016952.1 mouse_genomes_project 1 199127978 199172038 - MGP_129S1SvImJ_P0024271 Rcor3 protein_coding protein_coding MGP_129S1SvImJ_T0024272.1 MGP_129S1SvImJ_G0016952.1 mouse_genomes_project 1 199128188 199172029 - MGP_129S1SvImJ_P0024272 Rcor3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024273.1 MGP_129S1SvImJ_G0016952.1 mouse_genomes_project 1 199129996 199147235 - MGP_129S1SvImJ_P0024273 Rcor3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024274.1 MGP_129S1SvImJ_G0016952.1 mouse_genomes_project 1 199130223 199171896 - MGP_129S1SvImJ_P0024274 Rcor3 protein_coding protein_coding MGP_129S1SvImJ_T0024275.1 MGP_129S1SvImJ_G0016952.1 mouse_genomes_project 1 199130319 199156139 - MGP_129S1SvImJ_P0024275 Rcor3 protein_coding protein_coding MGP_129S1SvImJ_T0024276.1 MGP_129S1SvImJ_G0016952.1 mouse_genomes_project 1 199130800 199171925 - MGP_129S1SvImJ_P0024276 Rcor3 protein_coding protein_coding MGP_129S1SvImJ_T0024277.1 MGP_129S1SvImJ_G0016952.1 mouse_genomes_project 1 199135600 199138266 - Rcor3 protein_coding retained_intron MGP_129S1SvImJ_T0024278.1 MGP_129S1SvImJ_G0016952.1 mouse_genomes_project 1 199161227 199164639 - Rcor3 protein_coding retained_intron MGP_129S1SvImJ_T0024279.1 MGP_129S1SvImJ_G0016952.1 mouse_genomes_project 1 199161371 199171040 - MGP_129S1SvImJ_P0024279 Rcor3 protein_coding protein_coding MGP_129S1SvImJ_T0024280.1 MGP_129S1SvImJ_G0016952.1 mouse_genomes_project 1 199167579 199172033 - Rcor3 protein_coding retained_intron MGP_129S1SvImJ_T0024281.1 MGP_129S1SvImJ_G0016952.1 mouse_genomes_project 1 199169778 199172008 - Rcor3 protein_coding processed_transcript MGP_129S1SvImJ_T0024282.1 MGP_129S1SvImJ_G0016952.1 mouse_genomes_project 1 199170069 199172022 - Rcor3 protein_coding processed_transcript MGP_129S1SvImJ_T0000377.1 MGP_129S1SvImJ_G0000319.1 mouse_genomes_project 1 358838 361071 - TEC TEC MGP_129S1SvImJ_T0098781.1 MGP_129S1SvImJ_G0036866.1 mouse_genomes_project 1 74883501 74885804 + Gm29358 sense_intronic sense_intronic MGP_129S1SvImJ_T0098782.1 MGP_129S1SvImJ_G0036866.1 mouse_genomes_project 1 74883539 74886766 + Gm29358 sense_intronic sense_intronic MGP_129S1SvImJ_T0000662.1 MGP_129S1SvImJ_G0000600.1 mouse_genomes_project 1 138113924 138114906 - TEC TEC MGP_129S1SvImJ_T0020285.1 MGP_129S1SvImJ_G0016106.1 mouse_genomes_project 1 65299957 65319587 - MGP_129S1SvImJ_P0020285 Gm28845 protein_coding protein_coding MGP_129S1SvImJ_T0012142.1 MGP_129S1SvImJ_G0010231.1 mouse_genomes_project 1 87746128 87746476 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022963.1 MGP_129S1SvImJ_G0016647.1 mouse_genomes_project 1 166291371 166325290 - MGP_129S1SvImJ_P0022963 Dars2 protein_coding protein_coding MGP_129S1SvImJ_T0022964.1 MGP_129S1SvImJ_G0016647.1 mouse_genomes_project 1 166291952 166325274 - Dars2 protein_coding retained_intron MGP_129S1SvImJ_T0022965.1 MGP_129S1SvImJ_G0016647.1 mouse_genomes_project 1 166292261 166297728 - Dars2 protein_coding processed_transcript MGP_129S1SvImJ_T0022966.1 MGP_129S1SvImJ_G0016647.1 mouse_genomes_project 1 166292267 166325288 - Dars2 protein_coding retained_intron MGP_129S1SvImJ_T0022967.1 MGP_129S1SvImJ_G0016647.1 mouse_genomes_project 1 166295768 166325239 - Dars2 protein_coding retained_intron MGP_129S1SvImJ_T0022968.1 MGP_129S1SvImJ_G0016647.1 mouse_genomes_project 1 166315867 166316898 - Dars2 protein_coding retained_intron MGP_129S1SvImJ_T0022969.1 MGP_129S1SvImJ_G0016647.1 mouse_genomes_project 1 166316226 166325262 - Dars2 protein_coding processed_transcript MGP_129S1SvImJ_T0009499.1 MGP_129S1SvImJ_G0007615.1 mouse_genomes_project 1 48472391 48472833 + Gm22693 miRNA miRNA MGP_129S1SvImJ_T0102082.1 MGP_129S1SvImJ_G0039917.1 mouse_genomes_project 1 135350172 135352573 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0020604.1 MGP_129S1SvImJ_G0016167.1 mouse_genomes_project 1 75515443 75552088 - MGP_129S1SvImJ_P0020604 Ccdc108 protein_coding protein_coding MGP_129S1SvImJ_T0020605.1 MGP_129S1SvImJ_G0016167.1 mouse_genomes_project 1 75515507 75549651 - MGP_129S1SvImJ_P0020605 Ccdc108 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0020606.1 MGP_129S1SvImJ_G0016167.1 mouse_genomes_project 1 75538811 75552083 - Ccdc108 protein_coding retained_intron MGP_129S1SvImJ_T0020607.1 MGP_129S1SvImJ_G0016167.1 mouse_genomes_project 1 75539900 75552081 - Ccdc108 protein_coding retained_intron MGP_129S1SvImJ_T0023396.1 MGP_129S1SvImJ_G0016746.1 mouse_genomes_project 1 176996811 177003318 - MGP_129S1SvImJ_P0023396 Tomm40l protein_coding protein_coding MGP_129S1SvImJ_T0023397.1 MGP_129S1SvImJ_G0016746.1 mouse_genomes_project 1 176998603 177003252 - MGP_129S1SvImJ_P0023397 Tomm40l protein_coding protein_coding MGP_129S1SvImJ_T0023398.1 MGP_129S1SvImJ_G0016746.1 mouse_genomes_project 1 176998603 177002988 - MGP_129S1SvImJ_P0023398 Tomm40l protein_coding protein_coding MGP_129S1SvImJ_T0023399.1 MGP_129S1SvImJ_G0016746.1 mouse_genomes_project 1 176999164 177003255 - MGP_129S1SvImJ_P0023399 Tomm40l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023400.1 MGP_129S1SvImJ_G0016746.1 mouse_genomes_project 1 177001629 177003264 - MGP_129S1SvImJ_P0023400 Tomm40l protein_coding protein_coding MGP_129S1SvImJ_T0023401.1 MGP_129S1SvImJ_G0016746.1 mouse_genomes_project 1 177001700 177003248 - MGP_129S1SvImJ_P0023401 Tomm40l protein_coding protein_coding MGP_129S1SvImJ_T0023402.1 MGP_129S1SvImJ_G0016746.1 mouse_genomes_project 1 177001889 177003236 - Tomm40l protein_coding processed_transcript MGP_129S1SvImJ_T0023403.1 MGP_129S1SvImJ_G0016746.1 mouse_genomes_project 1 177001982 177003300 - Tomm40l protein_coding retained_intron MGP_129S1SvImJ_T0005853.1 MGP_129S1SvImJ_G0004911.1 mouse_genomes_project 1 92503745 92504553 - Gm28199 lincRNA lincRNA MGP_129S1SvImJ_T0012309.1 MGP_129S1SvImJ_G0010398.1 mouse_genomes_project 1 159929742 159929953 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005969.1 MGP_129S1SvImJ_G0005005.1 mouse_genomes_project 1 159909667 159956255 - Gm29282 lincRNA lincRNA MGP_129S1SvImJ_T0100355.1 MGP_129S1SvImJ_G0038422.1 mouse_genomes_project 1 98483106 98483234 + Gm26078 snoRNA snoRNA MGP_129S1SvImJ_T0005749.1 MGP_129S1SvImJ_G0004830.1 mouse_genomes_project 1 51192101 51193684 - Gm28055 lincRNA lincRNA MGP_129S1SvImJ_T0005750.1 MGP_129S1SvImJ_G0004830.1 mouse_genomes_project 1 51192908 51243657 - Gm28055 lincRNA lincRNA MGP_129S1SvImJ_T0017022.1 MGP_129S1SvImJ_G0015098.1 mouse_genomes_project 1 51584384 51666006 + Gm28177 processed_transcript processed_transcript MGP_129S1SvImJ_T0012300.1 MGP_129S1SvImJ_G0010389.1 mouse_genomes_project 1 155821552 155823394 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099105.1 MGP_129S1SvImJ_G0037172.1 mouse_genomes_project 1 110027700 110027807 - Gm24267 snRNA snRNA MGP_129S1SvImJ_T0022337.1 MGP_129S1SvImJ_G0016530.1 mouse_genomes_project 1 139624008 139639753 + MGP_129S1SvImJ_P0022337 Tnnt2 protein_coding protein_coding MGP_129S1SvImJ_T0022338.1 MGP_129S1SvImJ_G0016530.1 mouse_genomes_project 1 139624040 139639753 + MGP_129S1SvImJ_P0022338 Tnnt2 protein_coding protein_coding MGP_129S1SvImJ_T0022339.1 MGP_129S1SvImJ_G0016530.1 mouse_genomes_project 1 139624044 139627372 + Tnnt2 protein_coding retained_intron MGP_129S1SvImJ_T0022340.1 MGP_129S1SvImJ_G0016530.1 mouse_genomes_project 1 139624044 139632408 + Tnnt2 protein_coding retained_intron MGP_129S1SvImJ_T0022341.1 MGP_129S1SvImJ_G0016530.1 mouse_genomes_project 1 139624056 139635706 + MGP_129S1SvImJ_P0022341 Tnnt2 protein_coding protein_coding MGP_129S1SvImJ_T0022342.1 MGP_129S1SvImJ_G0016530.1 mouse_genomes_project 1 139624064 139639753 + MGP_129S1SvImJ_P0022342 Tnnt2 protein_coding protein_coding MGP_129S1SvImJ_T0022343.1 MGP_129S1SvImJ_G0016530.1 mouse_genomes_project 1 139624067 139639753 + MGP_129S1SvImJ_P0022343 Tnnt2 protein_coding protein_coding MGP_129S1SvImJ_T0022344.1 MGP_129S1SvImJ_G0016530.1 mouse_genomes_project 1 139628352 139637116 + MGP_129S1SvImJ_P0022344 Tnnt2 protein_coding protein_coding MGP_129S1SvImJ_T0022345.1 MGP_129S1SvImJ_G0016530.1 mouse_genomes_project 1 139628510 139639753 + MGP_129S1SvImJ_P0022345 Tnnt2 protein_coding protein_coding MGP_129S1SvImJ_T0022346.1 MGP_129S1SvImJ_G0016530.1 mouse_genomes_project 1 139628528 139639753 + MGP_129S1SvImJ_P0022346 Tnnt2 protein_coding protein_coding MGP_129S1SvImJ_T0022347.1 MGP_129S1SvImJ_G0016530.1 mouse_genomes_project 1 139628528 139639753 + MGP_129S1SvImJ_P0022347 Tnnt2 protein_coding protein_coding MGP_129S1SvImJ_T0022348.1 MGP_129S1SvImJ_G0016530.1 mouse_genomes_project 1 139628528 139639753 + MGP_129S1SvImJ_P0022348 Tnnt2 protein_coding protein_coding MGP_129S1SvImJ_T0022349.1 MGP_129S1SvImJ_G0016530.1 mouse_genomes_project 1 139628528 139639753 + MGP_129S1SvImJ_P0022349 Tnnt2 protein_coding protein_coding MGP_129S1SvImJ_T0022350.1 MGP_129S1SvImJ_G0016530.1 mouse_genomes_project 1 139628528 139639753 + MGP_129S1SvImJ_P0022350 Tnnt2 protein_coding protein_coding MGP_129S1SvImJ_T0022351.1 MGP_129S1SvImJ_G0016530.1 mouse_genomes_project 1 139637106 139637398 + Tnnt2 protein_coding retained_intron MGP_129S1SvImJ_T0011917.1 MGP_129S1SvImJ_G0010006.1 mouse_genomes_project 1 13231189 13231736 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023342.1 MGP_129S1SvImJ_G0016732.1 mouse_genomes_project 1 176371105 176410517 + MGP_129S1SvImJ_P0023342 Olfml2b protein_coding protein_coding MGP_129S1SvImJ_T0005974.1 MGP_129S1SvImJ_G0005009.1 mouse_genomes_project 1 164089608 164104564 - 1600012P17Rik lincRNA lincRNA MGP_129S1SvImJ_T0005975.1 MGP_129S1SvImJ_G0005009.1 mouse_genomes_project 1 164091515 164104172 - 1600012P17Rik lincRNA lincRNA MGP_129S1SvImJ_T0012088.1 MGP_129S1SvImJ_G0010177.1 mouse_genomes_project 1 63839961 63840465 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012136.1 MGP_129S1SvImJ_G0010225.1 mouse_genomes_project 1 84125078 84127563 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005849.1 MGP_129S1SvImJ_G0004907.1 mouse_genomes_project 1 91734883 91739745 - Gm28721 lincRNA lincRNA MGP_129S1SvImJ_T0000494.1 MGP_129S1SvImJ_G0000433.1 mouse_genomes_project 1 51024122 51026478 - TEC TEC MGP_129S1SvImJ_T0098431.1 MGP_129S1SvImJ_G0036516.1 mouse_genomes_project 1 188404244 188404360 - Gm26004 rRNA rRNA MGP_129S1SvImJ_T0009574.1 MGP_129S1SvImJ_G0007690.1 mouse_genomes_project 1 192032517 192032584 + Mir194-1 miRNA miRNA MGP_129S1SvImJ_T0021365.1 MGP_129S1SvImJ_G0016315.1 mouse_genomes_project 1 94019663 94055172 - MGP_129S1SvImJ_P0021365 Ndufa10 protein_coding protein_coding MGP_129S1SvImJ_T0021366.1 MGP_129S1SvImJ_G0016315.1 mouse_genomes_project 1 94019932 94055069 - MGP_129S1SvImJ_P0021366 Ndufa10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021367.1 MGP_129S1SvImJ_G0016315.1 mouse_genomes_project 1 94020495 94042004 - Ndufa10 protein_coding retained_intron MGP_129S1SvImJ_T0021368.1 MGP_129S1SvImJ_G0016315.1 mouse_genomes_project 1 94032706 94044276 - Ndufa10 protein_coding processed_transcript MGP_129S1SvImJ_T0021369.1 MGP_129S1SvImJ_G0016315.1 mouse_genomes_project 1 94043508 94052149 - Ndufa10 protein_coding retained_intron MGP_129S1SvImJ_T0021370.1 MGP_129S1SvImJ_G0016315.1 mouse_genomes_project 1 94044389 94052338 - Ndufa10 protein_coding retained_intron MGP_129S1SvImJ_T0021371.1 MGP_129S1SvImJ_G0016315.1 mouse_genomes_project 1 94048701 94055059 - MGP_129S1SvImJ_P0021371 Ndufa10 protein_coding protein_coding MGP_129S1SvImJ_T0021372.1 MGP_129S1SvImJ_G0016315.1 mouse_genomes_project 1 94054090 94055079 - Ndufa10 protein_coding retained_intron MGP_129S1SvImJ_T0020447.1 MGP_129S1SvImJ_G0016138.1 mouse_genomes_project 1 73569950 73570786 - MGP_129S1SvImJ_P0020447 Tnp1 protein_coding protein_coding MGP_129S1SvImJ_T0024379.1 MGP_129S1SvImJ_G0016969.1 mouse_genomes_project 1 202319949 202361695 - MGP_129S1SvImJ_P0024379 Cr2 protein_coding protein_coding MGP_129S1SvImJ_T0024380.1 MGP_129S1SvImJ_G0016969.1 mouse_genomes_project 1 202319949 202361696 - MGP_129S1SvImJ_P0024380 Cr2 protein_coding protein_coding MGP_129S1SvImJ_T0024381.1 MGP_129S1SvImJ_G0016969.1 mouse_genomes_project 1 202319955 202343035 - MGP_129S1SvImJ_P0024381 Cr2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024382.1 MGP_129S1SvImJ_G0016969.1 mouse_genomes_project 1 202322458 202336255 - Cr2 protein_coding retained_intron MGP_129S1SvImJ_T0024383.1 MGP_129S1SvImJ_G0016969.1 mouse_genomes_project 1 202322804 202333608 - MGP_129S1SvImJ_P0024383 Cr2 protein_coding protein_coding MGP_129S1SvImJ_T0024384.1 MGP_129S1SvImJ_G0016969.1 mouse_genomes_project 1 202322824 202361628 - MGP_129S1SvImJ_P0024384 Cr2 protein_coding protein_coding MGP_129S1SvImJ_T0024385.1 MGP_129S1SvImJ_G0016969.1 mouse_genomes_project 1 202323899 202336346 - Cr2 protein_coding retained_intron MGP_129S1SvImJ_T0024386.1 MGP_129S1SvImJ_G0016969.1 mouse_genomes_project 1 202324325 202361590 - MGP_129S1SvImJ_P0024386 Cr2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0024387.1 MGP_129S1SvImJ_G0016969.1 mouse_genomes_project 1 202346347 202351586 - Cr2 protein_coding processed_transcript MGP_129S1SvImJ_T0024388.1 MGP_129S1SvImJ_G0016969.1 mouse_genomes_project 1 202348894 202354337 - MGP_129S1SvImJ_P0024388 Cr2 protein_coding protein_coding MGP_129S1SvImJ_T0024389.1 MGP_129S1SvImJ_G0016969.1 mouse_genomes_project 1 202348981 202361695 - Cr2 protein_coding processed_transcript MGP_129S1SvImJ_T0024390.1 MGP_129S1SvImJ_G0016969.1 mouse_genomes_project 1 202353813 202361695 - Cr2 protein_coding processed_transcript MGP_129S1SvImJ_T0011936.1 MGP_129S1SvImJ_G0010025.1 mouse_genomes_project 1 18574351 18575550 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009522.1 MGP_129S1SvImJ_G0007638.1 mouse_genomes_project 1 85732018 85732095 + Mir5126 miRNA miRNA MGP_129S1SvImJ_T0023105.1 MGP_129S1SvImJ_G0016675.1 mouse_genomes_project 1 169346632 169399405 - MGP_129S1SvImJ_P0023105 BC055324 protein_coding protein_coding MGP_129S1SvImJ_T0023107.1 MGP_129S1SvImJ_G0016675.1 mouse_genomes_project 1 169354393 169399405 - MGP_129S1SvImJ_P0023107 BC055324 protein_coding protein_coding MGP_129S1SvImJ_T0023108.1 MGP_129S1SvImJ_G0016675.1 mouse_genomes_project 1 169354914 169362716 - MGP_129S1SvImJ_P0023108 BC055324 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023109.1 MGP_129S1SvImJ_G0016675.1 mouse_genomes_project 1 169371839 169377047 - BC055324 protein_coding retained_intron MGP_129S1SvImJ_T0023110.1 MGP_129S1SvImJ_G0016675.1 mouse_genomes_project 1 169391498 169399373 - MGP_129S1SvImJ_P0023110 BC055324 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023111.1 MGP_129S1SvImJ_G0016675.1 mouse_genomes_project 1 169394346 169399150 - BC055324 protein_coding processed_transcript MGP_129S1SvImJ_T0099120.1 MGP_129S1SvImJ_G0037187.1 mouse_genomes_project 1 140899237 140899297 - Gm23763 snRNA snRNA MGP_129S1SvImJ_T0022728.1 MGP_129S1SvImJ_G0016610.1 mouse_genomes_project 1 160029068 160051081 - MGP_129S1SvImJ_P0022728 Mr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022729.1 MGP_129S1SvImJ_G0016610.1 mouse_genomes_project 1 160029665 160035810 - Mr1 protein_coding retained_intron MGP_129S1SvImJ_T0022730.1 MGP_129S1SvImJ_G0016610.1 mouse_genomes_project 1 160029669 160051060 - MGP_129S1SvImJ_P0022730 Mr1 protein_coding protein_coding MGP_129S1SvImJ_T0022731.1 MGP_129S1SvImJ_G0016610.1 mouse_genomes_project 1 160030622 160051081 - MGP_129S1SvImJ_P0022731 Mr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022732.1 MGP_129S1SvImJ_G0016610.1 mouse_genomes_project 1 160037575 160051091 - Mr1 protein_coding retained_intron MGP_129S1SvImJ_T0000565.1 MGP_129S1SvImJ_G0000504.1 mouse_genomes_project 1 84310572 84311861 - TEC TEC MGP_129S1SvImJ_T0005823.1 MGP_129S1SvImJ_G0004886.1 mouse_genomes_project 1 80983864 80992471 + 9830004L10Rik lincRNA lincRNA MGP_129S1SvImJ_T0005824.1 MGP_129S1SvImJ_G0004886.1 mouse_genomes_project 1 80987393 80992471 + 9830004L10Rik lincRNA lincRNA MGP_129S1SvImJ_T0005825.1 MGP_129S1SvImJ_G0004886.1 mouse_genomes_project 1 80987415 80992516 + 9830004L10Rik lincRNA lincRNA MGP_129S1SvImJ_T0023114.1 MGP_129S1SvImJ_G0016677.1 mouse_genomes_project 1 169460607 169470147 + MGP_129S1SvImJ_P0023114 Sele protein_coding protein_coding MGP_129S1SvImJ_T0021803.1 MGP_129S1SvImJ_G0016414.1 mouse_genomes_project 1 128479716 128484986 - Actr3 protein_coding retained_intron MGP_129S1SvImJ_T0021804.1 MGP_129S1SvImJ_G0016414.1 mouse_genomes_project 1 128480122 128524126 - MGP_129S1SvImJ_P0021804 Actr3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021805.1 MGP_129S1SvImJ_G0016414.1 mouse_genomes_project 1 128480227 128523973 - MGP_129S1SvImJ_P0021805 Actr3 protein_coding protein_coding MGP_129S1SvImJ_T0021806.1 MGP_129S1SvImJ_G0016414.1 mouse_genomes_project 1 128483862 128485690 - Actr3 protein_coding retained_intron MGP_129S1SvImJ_T0021807.1 MGP_129S1SvImJ_G0016414.1 mouse_genomes_project 1 128493238 128496319 - Actr3 protein_coding retained_intron MGP_129S1SvImJ_T0021808.1 MGP_129S1SvImJ_G0016414.1 mouse_genomes_project 1 128493257 128524372 - MGP_129S1SvImJ_P0021808 Actr3 protein_coding protein_coding MGP_129S1SvImJ_T0021809.1 MGP_129S1SvImJ_G0016414.1 mouse_genomes_project 1 128493287 128523301 - MGP_129S1SvImJ_P0021809 Actr3 protein_coding protein_coding MGP_129S1SvImJ_T0021810.1 MGP_129S1SvImJ_G0016414.1 mouse_genomes_project 1 128494669 128524099 - MGP_129S1SvImJ_P0021810 Actr3 protein_coding protein_coding MGP_129S1SvImJ_T0021811.1 MGP_129S1SvImJ_G0016414.1 mouse_genomes_project 1 128494726 128524352 - MGP_129S1SvImJ_P0021811 Actr3 protein_coding protein_coding MGP_129S1SvImJ_T0021812.1 MGP_129S1SvImJ_G0016414.1 mouse_genomes_project 1 128494735 128524115 - MGP_129S1SvImJ_P0021812 Actr3 protein_coding protein_coding MGP_129S1SvImJ_T0021813.1 MGP_129S1SvImJ_G0016414.1 mouse_genomes_project 1 128504758 128524073 - Actr3 protein_coding retained_intron MGP_129S1SvImJ_T0019086.1 MGP_129S1SvImJ_G0015877.1 mouse_genomes_project 1 18879389 18904461 + MGP_129S1SvImJ_P0019086 Gsta3 protein_coding protein_coding MGP_129S1SvImJ_T0019087.1 MGP_129S1SvImJ_G0015877.1 mouse_genomes_project 1 18879407 18903821 + MGP_129S1SvImJ_P0019087 Gsta3 protein_coding protein_coding MGP_129S1SvImJ_T0019088.1 MGP_129S1SvImJ_G0015877.1 mouse_genomes_project 1 18879429 18903646 + MGP_129S1SvImJ_P0019088 Gsta3 protein_coding protein_coding MGP_129S1SvImJ_T0019089.1 MGP_129S1SvImJ_G0015877.1 mouse_genomes_project 1 18892320 18895112 + Gsta3 protein_coding retained_intron MGP_129S1SvImJ_T0102074.1 MGP_129S1SvImJ_G0039909.1 mouse_genomes_project 1 105344180 105391735 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0017048.1 MGP_129S1SvImJ_G0015109.1 mouse_genomes_project 1 99809271 99813822 - B230216N24Rik processed_transcript retained_intron MGP_129S1SvImJ_T0017049.1 MGP_129S1SvImJ_G0015109.1 mouse_genomes_project 1 99809282 99826210 - B230216N24Rik processed_transcript sense_intronic MGP_129S1SvImJ_T0017050.1 MGP_129S1SvImJ_G0015109.1 mouse_genomes_project 1 99809872 99826244 - B230216N24Rik processed_transcript sense_intronic MGP_129S1SvImJ_T0017051.1 MGP_129S1SvImJ_G0015109.1 mouse_genomes_project 1 99810023 99837278 - B230216N24Rik processed_transcript sense_intronic MGP_129S1SvImJ_T0017052.1 MGP_129S1SvImJ_G0015109.1 mouse_genomes_project 1 99824267 99826205 - B230216N24Rik processed_transcript retained_intron MGP_129S1SvImJ_T0000572.1 MGP_129S1SvImJ_G0000511.1 mouse_genomes_project 1 87359841 87362524 + TEC TEC MGP_129S1SvImJ_T0020394.1 MGP_129S1SvImJ_G0016124.1 mouse_genomes_project 1 71448546 71517898 - MGP_129S1SvImJ_P0020394 Bard1 protein_coding protein_coding MGP_129S1SvImJ_T0009497.1 MGP_129S1SvImJ_G0007613.1 mouse_genomes_project 1 44333263 44333404 + miRNA miRNA MGP_129S1SvImJ_T0005739.1 MGP_129S1SvImJ_G0004822.1 mouse_genomes_project 1 46482087 46513297 + Gm28826 lincRNA lincRNA MGP_129S1SvImJ_T0012239.1 MGP_129S1SvImJ_G0010328.1 mouse_genomes_project 1 126083495 126084793 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020596.1 MGP_129S1SvImJ_G0016163.1 mouse_genomes_project 1 75402285 75414933 + MGP_129S1SvImJ_P0020596 Wnt10a protein_coding protein_coding MGP_129S1SvImJ_T0020597.1 MGP_129S1SvImJ_G0016163.1 mouse_genomes_project 1 75404126 75414249 + MGP_129S1SvImJ_P0020597 Wnt10a protein_coding protein_coding MGP_129S1SvImJ_T0002962.1 MGP_129S1SvImJ_G0002785.1 mouse_genomes_project 1 171830196 171833041 - 5330438I03Rik antisense antisense MGP_129S1SvImJ_T0011878.1 MGP_129S1SvImJ_G0009967.1 mouse_genomes_project 1 2452478 2453558 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099074.1 MGP_129S1SvImJ_G0037141.1 mouse_genomes_project 1 31777142 31777248 + Gm23453 snRNA snRNA MGP_129S1SvImJ_T0000414.1 MGP_129S1SvImJ_G0000356.1 mouse_genomes_project 1 11658498 11658937 - TEC TEC MGP_129S1SvImJ_T0000796.1 MGP_129S1SvImJ_G0000732.1 mouse_genomes_project 1 188575797 188579666 - TEC TEC MGP_129S1SvImJ_T0021297.1 MGP_129S1SvImJ_G0016303.1 mouse_genomes_project 1 92787524 92813669 + Ube2f protein_coding retained_intron MGP_129S1SvImJ_T0021298.1 MGP_129S1SvImJ_G0016303.1 mouse_genomes_project 1 92787531 92823943 + MGP_129S1SvImJ_P0021298 Ube2f protein_coding protein_coding MGP_129S1SvImJ_T0021299.1 MGP_129S1SvImJ_G0016303.1 mouse_genomes_project 1 92787539 92824228 + MGP_129S1SvImJ_P0021299 Ube2f protein_coding protein_coding MGP_129S1SvImJ_T0021300.1 MGP_129S1SvImJ_G0016303.1 mouse_genomes_project 1 92787557 92828546 + MGP_129S1SvImJ_P0021300 Ube2f protein_coding protein_coding MGP_129S1SvImJ_T0021301.1 MGP_129S1SvImJ_G0016303.1 mouse_genomes_project 1 92787585 92823976 + MGP_129S1SvImJ_P0021301 Ube2f protein_coding protein_coding MGP_129S1SvImJ_T0021302.1 MGP_129S1SvImJ_G0016303.1 mouse_genomes_project 1 92787786 92824130 + MGP_129S1SvImJ_P0021302 Ube2f protein_coding protein_coding MGP_129S1SvImJ_T0021303.1 MGP_129S1SvImJ_G0016303.1 mouse_genomes_project 1 92787876 92803794 + MGP_129S1SvImJ_P0021303 Ube2f protein_coding protein_coding MGP_129S1SvImJ_T0021304.1 MGP_129S1SvImJ_G0016303.1 mouse_genomes_project 1 92803143 92814647 + Ube2f protein_coding retained_intron MGP_129S1SvImJ_T0021305.1 MGP_129S1SvImJ_G0016303.1 mouse_genomes_project 1 92813147 92814755 + Ube2f protein_coding retained_intron MGP_129S1SvImJ_T0021306.1 MGP_129S1SvImJ_G0016303.1 mouse_genomes_project 1 92814300 92823594 + Ube2f protein_coding retained_intron MGP_129S1SvImJ_T0021307.1 MGP_129S1SvImJ_G0016303.1 mouse_genomes_project 1 92821854 92823219 + Ube2f protein_coding retained_intron MGP_129S1SvImJ_T0022898.1 MGP_129S1SvImJ_G0016637.1 mouse_genomes_project 1 164361352 164380351 + MGP_129S1SvImJ_P0022898 Rfwd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022899.1 MGP_129S1SvImJ_G0016637.1 mouse_genomes_project 1 164361354 164491823 + MGP_129S1SvImJ_P0022899 Rfwd2 protein_coding protein_coding MGP_129S1SvImJ_T0022900.1 MGP_129S1SvImJ_G0016637.1 mouse_genomes_project 1 164361676 164428028 + MGP_129S1SvImJ_P0022900 Rfwd2 protein_coding protein_coding MGP_129S1SvImJ_T0022901.1 MGP_129S1SvImJ_G0016637.1 mouse_genomes_project 1 164361718 164380374 + MGP_129S1SvImJ_P0022901 Rfwd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022902.1 MGP_129S1SvImJ_G0016637.1 mouse_genomes_project 1 164368589 164403675 + Rfwd2 protein_coding retained_intron MGP_129S1SvImJ_T0022903.1 MGP_129S1SvImJ_G0016637.1 mouse_genomes_project 1 164379479 164449434 + MGP_129S1SvImJ_P0022903 Rfwd2 protein_coding protein_coding MGP_129S1SvImJ_T0022904.1 MGP_129S1SvImJ_G0016637.1 mouse_genomes_project 1 164395362 164451325 + MGP_129S1SvImJ_P0022904 Rfwd2 protein_coding protein_coding MGP_129S1SvImJ_T0022905.1 MGP_129S1SvImJ_G0016637.1 mouse_genomes_project 1 164403422 164411860 + Rfwd2 protein_coding retained_intron MGP_129S1SvImJ_T0022906.1 MGP_129S1SvImJ_G0016637.1 mouse_genomes_project 1 164449472 164451908 + Rfwd2 protein_coding retained_intron MGP_129S1SvImJ_T0022907.1 MGP_129S1SvImJ_G0016637.1 mouse_genomes_project 1 164449483 164469210 + MGP_129S1SvImJ_P0022907 Rfwd2 protein_coding protein_coding MGP_129S1SvImJ_T0022908.1 MGP_129S1SvImJ_G0016637.1 mouse_genomes_project 1 164451270 164469289 + Rfwd2 protein_coding retained_intron MGP_129S1SvImJ_T0022909.1 MGP_129S1SvImJ_G0016637.1 mouse_genomes_project 1 164465176 164470137 + Rfwd2 protein_coding retained_intron MGP_129S1SvImJ_T0022910.1 MGP_129S1SvImJ_G0016637.1 mouse_genomes_project 1 164486538 164489283 + Rfwd2 protein_coding retained_intron MGP_129S1SvImJ_T0020724.1 MGP_129S1SvImJ_G0016184.1 mouse_genomes_project 1 75874196 75883942 - MGP_129S1SvImJ_P0020724 Dnpep protein_coding protein_coding MGP_129S1SvImJ_T0020725.1 MGP_129S1SvImJ_G0016184.1 mouse_genomes_project 1 75874196 75883964 - MGP_129S1SvImJ_P0020725 Dnpep protein_coding protein_coding MGP_129S1SvImJ_T0020726.1 MGP_129S1SvImJ_G0016184.1 mouse_genomes_project 1 75874240 75883298 - MGP_129S1SvImJ_P0020726 Dnpep protein_coding protein_coding MGP_129S1SvImJ_T0020727.1 MGP_129S1SvImJ_G0016184.1 mouse_genomes_project 1 75874865 75883250 - MGP_129S1SvImJ_P0020727 Dnpep protein_coding protein_coding MGP_129S1SvImJ_T0020728.1 MGP_129S1SvImJ_G0016184.1 mouse_genomes_project 1 75874865 75883454 - MGP_129S1SvImJ_P0020728 Dnpep protein_coding protein_coding MGP_129S1SvImJ_T0020729.1 MGP_129S1SvImJ_G0016184.1 mouse_genomes_project 1 75875483 75880060 - Dnpep protein_coding retained_intron MGP_129S1SvImJ_T0020730.1 MGP_129S1SvImJ_G0016184.1 mouse_genomes_project 1 75878768 75883714 - Dnpep protein_coding retained_intron MGP_129S1SvImJ_T0020731.1 MGP_129S1SvImJ_G0016184.1 mouse_genomes_project 1 75880664 75883106 - MGP_129S1SvImJ_P0020731 Dnpep protein_coding protein_coding MGP_129S1SvImJ_T0020732.1 MGP_129S1SvImJ_G0016184.1 mouse_genomes_project 1 75880667 75883326 - MGP_129S1SvImJ_P0020732 Dnpep protein_coding protein_coding MGP_129S1SvImJ_T0020733.1 MGP_129S1SvImJ_G0016184.1 mouse_genomes_project 1 75881502 75883618 - MGP_129S1SvImJ_P0020733 Dnpep protein_coding protein_coding MGP_129S1SvImJ_T0020734.1 MGP_129S1SvImJ_G0016184.1 mouse_genomes_project 1 75882284 75883752 - MGP_129S1SvImJ_P0020734 Dnpep protein_coding protein_coding MGP_129S1SvImJ_T0020735.1 MGP_129S1SvImJ_G0016184.1 mouse_genomes_project 1 75882649 75883677 - Dnpep protein_coding retained_intron MGP_129S1SvImJ_T0020736.1 MGP_129S1SvImJ_G0016184.1 mouse_genomes_project 1 75882672 75884295 - MGP_129S1SvImJ_P0020736 Dnpep protein_coding protein_coding MGP_129S1SvImJ_T0020737.1 MGP_129S1SvImJ_G0016184.1 mouse_genomes_project 1 75882856 75883687 - MGP_129S1SvImJ_P0020737 Dnpep protein_coding protein_coding MGP_129S1SvImJ_T0012161.1 MGP_129S1SvImJ_G0010250.1 mouse_genomes_project 1 98382682 98383433 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012051.1 MGP_129S1SvImJ_G0010140.1 mouse_genomes_project 1 54776492 54777298 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000682.1 MGP_129S1SvImJ_G0000619.1 mouse_genomes_project 1 142584715 142587119 - TEC TEC MGP_129S1SvImJ_T0023826.1 MGP_129S1SvImJ_G0016862.1 mouse_genomes_project 1 186068330 186126933 - MGP_129S1SvImJ_P0023826 Gm1305 protein_coding protein_coding MGP_129S1SvImJ_T0000516.1 MGP_129S1SvImJ_G0000455.1 mouse_genomes_project 1 61627727 61628009 + TEC TEC MGP_129S1SvImJ_T0000757.1 MGP_129S1SvImJ_G0000694.1 mouse_genomes_project 1 171352803 171353365 - TEC TEC MGP_129S1SvImJ_T0000624.1 MGP_129S1SvImJ_G0000563.1 mouse_genomes_project 1 126357018 126360722 - TEC TEC MGP_129S1SvImJ_T0102096.1 MGP_129S1SvImJ_G0039931.1 mouse_genomes_project 1 179801129 179803571 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0022203.1 MGP_129S1SvImJ_G0016501.1 mouse_genomes_project 1 137842042 137877191 - MGP_129S1SvImJ_P0022203 Adora1 protein_coding protein_coding MGP_129S1SvImJ_T0022204.1 MGP_129S1SvImJ_G0016501.1 mouse_genomes_project 1 137842044 137878044 - MGP_129S1SvImJ_P0022204 Adora1 protein_coding protein_coding MGP_129S1SvImJ_T0022205.1 MGP_129S1SvImJ_G0016501.1 mouse_genomes_project 1 137844168 137878010 - MGP_129S1SvImJ_P0022205 Adora1 protein_coding protein_coding MGP_129S1SvImJ_T0022206.1 MGP_129S1SvImJ_G0016501.1 mouse_genomes_project 1 137846216 137877977 - MGP_129S1SvImJ_P0022206 Adora1 protein_coding protein_coding MGP_129S1SvImJ_T0021063.1 MGP_129S1SvImJ_G0016249.1 mouse_genomes_project 1 87806708 87809498 + MGP_129S1SvImJ_P0021063 protein_coding protein_coding MGP_129S1SvImJ_T0021064.1 MGP_129S1SvImJ_G0016249.1 mouse_genomes_project 1 87806712 87809716 + protein_coding processed_transcript MGP_129S1SvImJ_T0021065.1 MGP_129S1SvImJ_G0016249.1 mouse_genomes_project 1 87806778 87810180 + MGP_129S1SvImJ_P0021065 protein_coding protein_coding MGP_129S1SvImJ_T0021066.1 MGP_129S1SvImJ_G0016249.1 mouse_genomes_project 1 87806877 87810606 + MGP_129S1SvImJ_P0021066 protein_coding protein_coding MGP_129S1SvImJ_T0000467.1 MGP_129S1SvImJ_G0000406.1 mouse_genomes_project 1 32620134 32622359 + TEC TEC MGP_129S1SvImJ_T0023674.1 MGP_129S1SvImJ_G0016820.1 mouse_genomes_project 1 180078734 180081125 + MGP_129S1SvImJ_P0023674 Olfr433 protein_coding protein_coding MGP_129S1SvImJ_T0017075.1 MGP_129S1SvImJ_G0015116.1 mouse_genomes_project 1 143010321 143013919 + Gm37423 processed_transcript retained_intron MGP_129S1SvImJ_T0005881.1 MGP_129S1SvImJ_G0004935.1 mouse_genomes_project 1 108557206 108559003 - A530053M12Rik lincRNA lincRNA MGP_129S1SvImJ_T0000483.1 MGP_129S1SvImJ_G0000422.1 mouse_genomes_project 1 38871888 38874959 + TEC TEC MGP_129S1SvImJ_T0098793.1 MGP_129S1SvImJ_G0036877.1 mouse_genomes_project 1 157493885 157516941 - Gm28792 sense_intronic sense_intronic MGP_129S1SvImJ_T0023238.1 MGP_129S1SvImJ_G0016703.1 mouse_genomes_project 1 171773669 171840279 + MGP_129S1SvImJ_P0023238 Ildr2 protein_coding protein_coding MGP_129S1SvImJ_T0023239.1 MGP_129S1SvImJ_G0016703.1 mouse_genomes_project 1 171773723 171834726 + MGP_129S1SvImJ_P0023239 Ildr2 protein_coding protein_coding MGP_129S1SvImJ_T0023240.1 MGP_129S1SvImJ_G0016703.1 mouse_genomes_project 1 171773723 171834726 + MGP_129S1SvImJ_P0023240 Ildr2 protein_coding protein_coding MGP_129S1SvImJ_T0023241.1 MGP_129S1SvImJ_G0016703.1 mouse_genomes_project 1 171773723 171834726 + MGP_129S1SvImJ_P0023241 Ildr2 protein_coding protein_coding MGP_129S1SvImJ_T0023242.1 MGP_129S1SvImJ_G0016703.1 mouse_genomes_project 1 171773723 171834726 + MGP_129S1SvImJ_P0023242 Ildr2 protein_coding protein_coding MGP_129S1SvImJ_T0023243.1 MGP_129S1SvImJ_G0016703.1 mouse_genomes_project 1 171773723 171834726 + MGP_129S1SvImJ_P0023243 Ildr2 protein_coding protein_coding MGP_129S1SvImJ_T0023244.1 MGP_129S1SvImJ_G0016703.1 mouse_genomes_project 1 171773723 171834726 + MGP_129S1SvImJ_P0023244 Ildr2 protein_coding protein_coding MGP_129S1SvImJ_T0009492.1 MGP_129S1SvImJ_G0007608.1 mouse_genomes_project 1 35038425 35038566 + miRNA miRNA MGP_129S1SvImJ_T0000584.1 MGP_129S1SvImJ_G0000523.1 mouse_genomes_project 1 90085312 90087053 + TEC TEC MGP_129S1SvImJ_T0019110.1 MGP_129S1SvImJ_G0015883.1 mouse_genomes_project 1 20865647 20867428 - MGP_129S1SvImJ_P0019110 4933415F23Rik protein_coding protein_coding MGP_129S1SvImJ_T0000448.1 MGP_129S1SvImJ_G0000388.1 mouse_genomes_project 1 23706280 23707294 - TEC TEC MGP_129S1SvImJ_T0021576.1 MGP_129S1SvImJ_G0016362.1 mouse_genomes_project 1 100191234 100292015 + MGP_129S1SvImJ_P0021576 Slco6d1 protein_coding protein_coding MGP_129S1SvImJ_T0021577.1 MGP_129S1SvImJ_G0016362.1 mouse_genomes_project 1 100191237 100299623 + MGP_129S1SvImJ_P0021577 Slco6d1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021578.1 MGP_129S1SvImJ_G0016362.1 mouse_genomes_project 1 100191264 100291882 + MGP_129S1SvImJ_P0021578 Slco6d1 protein_coding protein_coding MGP_129S1SvImJ_T0021579.1 MGP_129S1SvImJ_G0016362.1 mouse_genomes_project 1 100280323 100292018 + Slco6d1 protein_coding processed_transcript MGP_129S1SvImJ_T0023284.1 MGP_129S1SvImJ_G0016717.1 mouse_genomes_project 1 173282709 173444048 + MGP_129S1SvImJ_P0023284 Lmx1a protein_coding protein_coding MGP_129S1SvImJ_T0023285.1 MGP_129S1SvImJ_G0016717.1 mouse_genomes_project 1 173283029 173444048 + MGP_129S1SvImJ_P0023285 Lmx1a protein_coding protein_coding MGP_129S1SvImJ_T0012254.1 MGP_129S1SvImJ_G0010343.1 mouse_genomes_project 1 134640141 134641316 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011997.1 MGP_129S1SvImJ_G0010086.1 mouse_genomes_project 1 38346203 38346792 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000645.1 MGP_129S1SvImJ_G0000584.1 mouse_genomes_project 1 133146380 133150221 + TEC TEC MGP_129S1SvImJ_T0020610.1 MGP_129S1SvImJ_G0016169.1 mouse_genomes_project 1 75585089 75668252 - MGP_129S1SvImJ_P0020610 Nhej1 protein_coding protein_coding MGP_129S1SvImJ_T0020611.1 MGP_129S1SvImJ_G0016169.1 mouse_genomes_project 1 75585298 75683850 - MGP_129S1SvImJ_P0020611 Nhej1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0020612.1 MGP_129S1SvImJ_G0016169.1 mouse_genomes_project 1 75683719 75683784 - Nhej1 protein_coding processed_transcript MGP_129S1SvImJ_T0011885.1 MGP_129S1SvImJ_G0009974.1 mouse_genomes_project 1 4158381 4158411 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021067.1 MGP_129S1SvImJ_G0016250.1 mouse_genomes_project 1 87827272 87873013 - Pde6d protein_coding retained_intron MGP_129S1SvImJ_T0021068.1 MGP_129S1SvImJ_G0016250.1 mouse_genomes_project 1 87827272 87873013 - MGP_129S1SvImJ_P0021068 Pde6d protein_coding protein_coding MGP_129S1SvImJ_T0021069.1 MGP_129S1SvImJ_G0016250.1 mouse_genomes_project 1 87827300 87873095 - MGP_129S1SvImJ_P0021069 Pde6d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021070.1 MGP_129S1SvImJ_G0016250.1 mouse_genomes_project 1 87827798 87872983 - Pde6d protein_coding processed_transcript MGP_129S1SvImJ_T0021071.1 MGP_129S1SvImJ_G0016250.1 mouse_genomes_project 1 87829670 87873013 - MGP_129S1SvImJ_P0021071 Pde6d protein_coding protein_coding MGP_129S1SvImJ_T0000593.1 MGP_129S1SvImJ_G0000532.1 mouse_genomes_project 1 93588810 93591316 - TEC TEC MGP_129S1SvImJ_T0000521.1 MGP_129S1SvImJ_G0000460.1 mouse_genomes_project 1 62357572 62360090 + TEC TEC MGP_129S1SvImJ_T0005764.1 MGP_129S1SvImJ_G0004840.1 mouse_genomes_project 1 59333735 59346968 + Gm29016 lincRNA lincRNA MGP_129S1SvImJ_T0002992.1 MGP_129S1SvImJ_G0002810.1 mouse_genomes_project 1 191959192 191963342 - Gm34882 antisense antisense MGP_129S1SvImJ_T0024231.1 MGP_129S1SvImJ_G0016944.1 mouse_genomes_project 1 198387782 198436399 - MGP_129S1SvImJ_P0024231 Ppp2r5a protein_coding protein_coding MGP_129S1SvImJ_T0024232.1 MGP_129S1SvImJ_G0016944.1 mouse_genomes_project 1 198392481 198394142 - Ppp2r5a protein_coding retained_intron MGP_129S1SvImJ_T0024233.1 MGP_129S1SvImJ_G0016944.1 mouse_genomes_project 1 198394010 198423052 - Ppp2r5a protein_coding processed_transcript MGP_129S1SvImJ_T0024234.1 MGP_129S1SvImJ_G0016944.1 mouse_genomes_project 1 198394636 198406391 - MGP_129S1SvImJ_P0024234 Ppp2r5a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024235.1 MGP_129S1SvImJ_G0016944.1 mouse_genomes_project 1 198399396 198406380 - Ppp2r5a protein_coding retained_intron MGP_129S1SvImJ_T0024236.1 MGP_129S1SvImJ_G0016944.1 mouse_genomes_project 1 198410288 198438656 - Ppp2r5a protein_coding processed_transcript MGP_129S1SvImJ_T0024237.1 MGP_129S1SvImJ_G0016944.1 mouse_genomes_project 1 198438016 198442441 - Ppp2r5a protein_coding retained_intron MGP_129S1SvImJ_T0100380.1 MGP_129S1SvImJ_G0038447.1 mouse_genomes_project 1 158263746 158263886 + Gm25588 snoRNA snoRNA MGP_129S1SvImJ_T0100400.1 MGP_129S1SvImJ_G0038467.1 mouse_genomes_project 1 178821618 178821741 - Gm26077 snoRNA snoRNA MGP_129S1SvImJ_T0019158.1 MGP_129S1SvImJ_G0015894.1 mouse_genomes_project 1 26848825 26852978 - MGP_129S1SvImJ_P0019158 Gm597 protein_coding protein_coding MGP_129S1SvImJ_T0023115.1 MGP_129S1SvImJ_G0016678.1 mouse_genomes_project 1 169476632 169498832 + MGP_129S1SvImJ_P0023115 Sell protein_coding protein_coding MGP_129S1SvImJ_T0023116.1 MGP_129S1SvImJ_G0016678.1 mouse_genomes_project 1 169476735 169495323 + MGP_129S1SvImJ_P0023116 Sell protein_coding protein_coding MGP_129S1SvImJ_T0023117.1 MGP_129S1SvImJ_G0016678.1 mouse_genomes_project 1 169476839 169494347 + MGP_129S1SvImJ_P0023117 Sell protein_coding unknown_likely_coding MGP_129S1SvImJ_T0023118.1 MGP_129S1SvImJ_G0016678.1 mouse_genomes_project 1 169476839 169494343 + MGP_129S1SvImJ_P0023118 Sell protein_coding protein_coding MGP_129S1SvImJ_T0023119.1 MGP_129S1SvImJ_G0016678.1 mouse_genomes_project 1 169483612 169494647 + MGP_129S1SvImJ_P0023119 Sell protein_coding protein_coding MGP_129S1SvImJ_T0011870.1 MGP_129S1SvImJ_G0009959.1 mouse_genomes_project 1 1567871 1568321 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000509.1 MGP_129S1SvImJ_G0000448.1 mouse_genomes_project 1 59904082 59904803 - TEC TEC MGP_129S1SvImJ_T0012270.1 MGP_129S1SvImJ_G0010359.1 mouse_genomes_project 1 142902140 142902363 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000487.1 MGP_129S1SvImJ_G0000426.1 mouse_genomes_project 1 42490942 42493433 + TEC TEC MGP_129S1SvImJ_T0000615.1 MGP_129S1SvImJ_G0000554.1 mouse_genomes_project 1 122561635 122569798 - TEC TEC MGP_129S1SvImJ_T0102072.1 MGP_129S1SvImJ_G0039907.1 mouse_genomes_project 1 104387149 104477139 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0009544.1 MGP_129S1SvImJ_G0007660.1 mouse_genomes_project 1 137341641 137341729 - Mir6903 miRNA miRNA MGP_129S1SvImJ_T0021428.1 MGP_129S1SvImJ_G0016332.1 mouse_genomes_project 1 94612792 94618779 + MGP_129S1SvImJ_P0021428 Aqp12 protein_coding protein_coding MGP_129S1SvImJ_T0021508.1 MGP_129S1SvImJ_G0016347.1 mouse_genomes_project 1 95342182 95398186 - MGP_129S1SvImJ_P0021508 Thap4 protein_coding protein_coding MGP_129S1SvImJ_T0021509.1 MGP_129S1SvImJ_G0016347.1 mouse_genomes_project 1 95345649 95372663 - MGP_129S1SvImJ_P0021509 Thap4 protein_coding protein_coding MGP_129S1SvImJ_T0021510.1 MGP_129S1SvImJ_G0016347.1 mouse_genomes_project 1 95345652 95398270 - MGP_129S1SvImJ_P0021510 Thap4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021511.1 MGP_129S1SvImJ_G0016347.1 mouse_genomes_project 1 95345653 95355065 - MGP_129S1SvImJ_P0021511 Thap4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021512.1 MGP_129S1SvImJ_G0016347.1 mouse_genomes_project 1 95354862 95391516 - MGP_129S1SvImJ_P0021512 Thap4 protein_coding protein_coding MGP_129S1SvImJ_T0021513.1 MGP_129S1SvImJ_G0016347.1 mouse_genomes_project 1 95365350 95398056 - Thap4 protein_coding retained_intron MGP_129S1SvImJ_T0002894.1 MGP_129S1SvImJ_G0002733.1 mouse_genomes_project 1 130972121 130993899 - 2900009J06Rik antisense antisense MGP_129S1SvImJ_T0002895.1 MGP_129S1SvImJ_G0002733.1 mouse_genomes_project 1 130972121 130993937 - 2900009J06Rik antisense antisense MGP_129S1SvImJ_T0002899.1 MGP_129S1SvImJ_G0002737.1 mouse_genomes_project 1 134138779 134139945 - Gm28857 antisense antisense MGP_129S1SvImJ_T0000686.1 MGP_129S1SvImJ_G0000623.1 mouse_genomes_project 1 143121097 143123569 + TEC TEC MGP_129S1SvImJ_T0022697.1 MGP_129S1SvImJ_G0016601.1 mouse_genomes_project 1 158593590 158607518 + MGP_129S1SvImJ_P0022697 Rnasel protein_coding protein_coding MGP_129S1SvImJ_T0022698.1 MGP_129S1SvImJ_G0016601.1 mouse_genomes_project 1 158596048 158608842 + MGP_129S1SvImJ_P0022698 Rnasel protein_coding protein_coding MGP_129S1SvImJ_T0022699.1 MGP_129S1SvImJ_G0016601.1 mouse_genomes_project 1 158596056 158607583 + MGP_129S1SvImJ_P0022699 Rnasel protein_coding protein_coding MGP_129S1SvImJ_T0022700.1 MGP_129S1SvImJ_G0016601.1 mouse_genomes_project 1 158596072 158607366 + Rnasel protein_coding retained_intron MGP_129S1SvImJ_T0022701.1 MGP_129S1SvImJ_G0016601.1 mouse_genomes_project 1 158601592 158607366 + Rnasel protein_coding processed_transcript MGP_129S1SvImJ_T0000492.1 MGP_129S1SvImJ_G0000431.1 mouse_genomes_project 1 46780086 46782029 - TEC TEC MGP_129S1SvImJ_T0000553.1 MGP_129S1SvImJ_G0000492.1 mouse_genomes_project 1 80944349 80946178 - TEC TEC MGP_129S1SvImJ_T0022520.1 MGP_129S1SvImJ_G0016567.1 mouse_genomes_project 1 148615521 148622467 - MGP_129S1SvImJ_P0022520 Rgs1 protein_coding protein_coding MGP_129S1SvImJ_T0022521.1 MGP_129S1SvImJ_G0016567.1 mouse_genomes_project 1 148616438 148622281 - Rgs1 protein_coding retained_intron MGP_129S1SvImJ_T0022522.1 MGP_129S1SvImJ_G0016567.1 mouse_genomes_project 1 148617197 148622285 - MGP_129S1SvImJ_P0022522 Rgs1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022523.1 MGP_129S1SvImJ_G0016567.1 mouse_genomes_project 1 148617820 148622285 - MGP_129S1SvImJ_P0022523 Rgs1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022524.1 MGP_129S1SvImJ_G0016567.1 mouse_genomes_project 1 148617898 148622253 - MGP_129S1SvImJ_P0022524 Rgs1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022525.1 MGP_129S1SvImJ_G0016567.1 mouse_genomes_project 1 148617898 148622283 - MGP_129S1SvImJ_P0022525 Rgs1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022526.1 MGP_129S1SvImJ_G0016567.1 mouse_genomes_project 1 148618688 148622284 - MGP_129S1SvImJ_P0022526 Rgs1 protein_coding protein_coding MGP_129S1SvImJ_T0022527.1 MGP_129S1SvImJ_G0016567.1 mouse_genomes_project 1 148621017 148622283 - Rgs1 protein_coding retained_intron MGP_129S1SvImJ_T0022528.1 MGP_129S1SvImJ_G0016567.1 mouse_genomes_project 1 148621020 148622286 - Rgs1 protein_coding retained_intron MGP_129S1SvImJ_T0012206.1 MGP_129S1SvImJ_G0010295.1 mouse_genomes_project 1 114447701 114448264 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023691.1 MGP_129S1SvImJ_G0016833.1 mouse_genomes_project 1 180560201 180903720 + MGP_129S1SvImJ_P0023691 Fmn2 protein_coding protein_coding MGP_129S1SvImJ_T0023692.1 MGP_129S1SvImJ_G0016833.1 mouse_genomes_project 1 180598917 180648316 + Fmn2 protein_coding processed_transcript MGP_129S1SvImJ_T0023693.1 MGP_129S1SvImJ_G0016833.1 mouse_genomes_project 1 180680695 180688336 + Fmn2 protein_coding processed_transcript MGP_129S1SvImJ_T0023694.1 MGP_129S1SvImJ_G0016833.1 mouse_genomes_project 1 180680696 180771931 + MGP_129S1SvImJ_P0023694 Fmn2 protein_coding protein_coding MGP_129S1SvImJ_T0023695.1 MGP_129S1SvImJ_G0016833.1 mouse_genomes_project 1 180683448 180777801 + Fmn2 protein_coding retained_intron MGP_129S1SvImJ_T0023696.1 MGP_129S1SvImJ_G0016833.1 mouse_genomes_project 1 180785407 180902259 + Fmn2 protein_coding processed_transcript MGP_129S1SvImJ_T0000576.1 MGP_129S1SvImJ_G0000515.1 mouse_genomes_project 1 88145359 88148907 + TEC TEC MGP_129S1SvImJ_T0000489.1 MGP_129S1SvImJ_G0000428.1 mouse_genomes_project 1 43591810 43598579 + TEC TEC MGP_129S1SvImJ_T0002976.1 MGP_129S1SvImJ_G0002797.1 mouse_genomes_project 1 178182725 178183393 + Gm36937 antisense antisense MGP_129S1SvImJ_T0020400.1 MGP_129S1SvImJ_G0016126.1 mouse_genomes_project 1 71990362 72012893 + MGP_129S1SvImJ_P0020400 Atic protein_coding protein_coding MGP_129S1SvImJ_T0020401.1 MGP_129S1SvImJ_G0016126.1 mouse_genomes_project 1 71990391 71996411 + Atic protein_coding retained_intron MGP_129S1SvImJ_T0020402.1 MGP_129S1SvImJ_G0016126.1 mouse_genomes_project 1 71990391 71993164 + Atic protein_coding retained_intron MGP_129S1SvImJ_T0020403.1 MGP_129S1SvImJ_G0016126.1 mouse_genomes_project 1 71990391 72006625 + Atic protein_coding retained_intron MGP_129S1SvImJ_T0020404.1 MGP_129S1SvImJ_G0016126.1 mouse_genomes_project 1 71990425 71996411 + Atic protein_coding retained_intron MGP_129S1SvImJ_T0020405.1 MGP_129S1SvImJ_G0016126.1 mouse_genomes_project 1 72002127 72006222 + Atic protein_coding retained_intron MGP_129S1SvImJ_T0017107.1 MGP_129S1SvImJ_G0015121.1 mouse_genomes_project 1 170306958 170315875 + Gm20743 processed_transcript lincRNA MGP_129S1SvImJ_T0017108.1 MGP_129S1SvImJ_G0015121.1 mouse_genomes_project 1 170307183 170384902 + Gm20743 processed_transcript antisense MGP_129S1SvImJ_T0006050.1 MGP_129S1SvImJ_G0005066.1 mouse_genomes_project 1 191277754 191296764 - Gm37800 lincRNA lincRNA MGP_129S1SvImJ_T0006051.1 MGP_129S1SvImJ_G0005066.1 mouse_genomes_project 1 191278392 191285288 - Gm37800 lincRNA lincRNA MGP_129S1SvImJ_T0023631.1 MGP_129S1SvImJ_G0016796.1 mouse_genomes_project 1 178580547 178581835 + MGP_129S1SvImJ_P0023631 Crp protein_coding protein_coding MGP_129S1SvImJ_T0023632.1 MGP_129S1SvImJ_G0016796.1 mouse_genomes_project 1 178580548 178709171 + Crp protein_coding processed_transcript MGP_129S1SvImJ_T0009517.1 MGP_129S1SvImJ_G0007633.1 mouse_genomes_project 1 77122635 77122719 + Mir6343 miRNA miRNA MGP_129S1SvImJ_T0100378.1 MGP_129S1SvImJ_G0038445.1 mouse_genomes_project 1 149679899 149680026 - Gm25460 snoRNA snoRNA MGP_129S1SvImJ_T0021652.1 MGP_129S1SvImJ_G0016383.1 mouse_genomes_project 1 109787460 109804084 + MGP_129S1SvImJ_P0021652 protein_coding protein_coding MGP_129S1SvImJ_T0002941.1 MGP_129S1SvImJ_G0002769.1 mouse_genomes_project 1 162545498 162561487 - Gm15486 antisense antisense MGP_129S1SvImJ_T0022838.1 MGP_129S1SvImJ_G0016628.1 mouse_genomes_project 1 161785813 161924952 - MGP_129S1SvImJ_P0022838 Ralgps2 protein_coding protein_coding MGP_129S1SvImJ_T0022839.1 MGP_129S1SvImJ_G0016628.1 mouse_genomes_project 1 161788407 161924893 - MGP_129S1SvImJ_P0022839 Ralgps2 protein_coding protein_coding MGP_129S1SvImJ_T0022840.1 MGP_129S1SvImJ_G0016628.1 mouse_genomes_project 1 161788407 161924949 - MGP_129S1SvImJ_P0022840 Ralgps2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022841.1 MGP_129S1SvImJ_G0016628.1 mouse_genomes_project 1 161789355 161924737 - MGP_129S1SvImJ_P0022841 Ralgps2 protein_coding protein_coding MGP_129S1SvImJ_T0022842.1 MGP_129S1SvImJ_G0016628.1 mouse_genomes_project 1 161789761 161924881 - MGP_129S1SvImJ_P0022842 Ralgps2 protein_coding protein_coding MGP_129S1SvImJ_T0022843.1 MGP_129S1SvImJ_G0016628.1 mouse_genomes_project 1 161789767 161924958 - MGP_129S1SvImJ_P0022843 Ralgps2 protein_coding protein_coding MGP_129S1SvImJ_T0022844.1 MGP_129S1SvImJ_G0016628.1 mouse_genomes_project 1 161790475 161795096 - Ralgps2 protein_coding retained_intron MGP_129S1SvImJ_T0022845.1 MGP_129S1SvImJ_G0016628.1 mouse_genomes_project 1 161794608 161924976 - MGP_129S1SvImJ_P0022845 Ralgps2 protein_coding protein_coding MGP_129S1SvImJ_T0022846.1 MGP_129S1SvImJ_G0016628.1 mouse_genomes_project 1 161798042 161924917 - MGP_129S1SvImJ_P0022846 Ralgps2 protein_coding protein_coding MGP_129S1SvImJ_T0022847.1 MGP_129S1SvImJ_G0016628.1 mouse_genomes_project 1 161800399 161924943 - MGP_129S1SvImJ_P0022847 Ralgps2 protein_coding protein_coding MGP_129S1SvImJ_T0022848.1 MGP_129S1SvImJ_G0016628.1 mouse_genomes_project 1 161800418 161924168 - MGP_129S1SvImJ_P0022848 Ralgps2 protein_coding protein_coding MGP_129S1SvImJ_T0022849.1 MGP_129S1SvImJ_G0016628.1 mouse_genomes_project 1 161810020 161812370 - Ralgps2 protein_coding retained_intron MGP_129S1SvImJ_T0022850.1 MGP_129S1SvImJ_G0016628.1 mouse_genomes_project 1 161810074 161814214 - Ralgps2 protein_coding retained_intron MGP_129S1SvImJ_T0022853.1 MGP_129S1SvImJ_G0016628.1 mouse_genomes_project 1 161871593 161924484 - MGP_129S1SvImJ_P0022853 Ralgps2 protein_coding protein_coding MGP_129S1SvImJ_T0022854.1 MGP_129S1SvImJ_G0016628.1 mouse_genomes_project 1 161885191 161924131 - MGP_129S1SvImJ_P0022854 Ralgps2 protein_coding protein_coding MGP_129S1SvImJ_T0021207.1 MGP_129S1SvImJ_G0016278.1 mouse_genomes_project 1 89565296 89628377 + MGP_129S1SvImJ_P0021207 Ugt1a5 protein_coding protein_coding MGP_129S1SvImJ_T0019278.1 MGP_129S1SvImJ_G0015916.1 mouse_genomes_project 1 33284813 33314900 + MGP_129S1SvImJ_P0019278 Plekhb2 protein_coding protein_coding MGP_129S1SvImJ_T0019279.1 MGP_129S1SvImJ_G0015916.1 mouse_genomes_project 1 33284829 33320481 + MGP_129S1SvImJ_P0019279 Plekhb2 protein_coding protein_coding MGP_129S1SvImJ_T0019280.1 MGP_129S1SvImJ_G0015916.1 mouse_genomes_project 1 33288222 33301152 + MGP_129S1SvImJ_P0019280 Plekhb2 protein_coding protein_coding MGP_129S1SvImJ_T0019281.1 MGP_129S1SvImJ_G0015916.1 mouse_genomes_project 1 33318556 33320478 + Plekhb2 protein_coding processed_transcript MGP_129S1SvImJ_T0099098.1 MGP_129S1SvImJ_G0037165.1 mouse_genomes_project 1 88768767 88768862 - Gm23504 snRNA snRNA MGP_129S1SvImJ_T0022531.1 MGP_129S1SvImJ_G0016569.1 mouse_genomes_project 1 149134684 149158822 - MGP_129S1SvImJ_P0022531 Rgs18 protein_coding protein_coding MGP_129S1SvImJ_T0012366.1 MGP_129S1SvImJ_G0010455.1 mouse_genomes_project 1 187347794 187348243 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005778.1 MGP_129S1SvImJ_G0004852.1 mouse_genomes_project 1 63250825 63263677 + Gm20342 lincRNA lincRNA MGP_129S1SvImJ_T0023990.1 MGP_129S1SvImJ_G0016893.1 mouse_genomes_project 1 188936530 188964989 - MGP_129S1SvImJ_P0023990 Fbxo28 protein_coding protein_coding MGP_129S1SvImJ_T0023991.1 MGP_129S1SvImJ_G0016893.1 mouse_genomes_project 1 188938616 188941816 - Fbxo28 protein_coding retained_intron MGP_129S1SvImJ_T0023992.1 MGP_129S1SvImJ_G0016893.1 mouse_genomes_project 1 188939891 188964971 - MGP_129S1SvImJ_P0023992 Fbxo28 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023993.1 MGP_129S1SvImJ_G0016893.1 mouse_genomes_project 1 188940419 188964942 - MGP_129S1SvImJ_P0023993 Fbxo28 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023994.1 MGP_129S1SvImJ_G0016893.1 mouse_genomes_project 1 188940672 188965000 - MGP_129S1SvImJ_P0023994 Fbxo28 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021378.1 MGP_129S1SvImJ_G0016318.1 mouse_genomes_project 1 94106588 94114461 - MGP_129S1SvImJ_P0021378 Olfr1414 protein_coding protein_coding MGP_129S1SvImJ_T0021379.1 MGP_129S1SvImJ_G0016318.1 mouse_genomes_project 1 94107003 94114461 - MGP_129S1SvImJ_P0021379 Olfr1414 protein_coding protein_coding MGP_129S1SvImJ_T0021380.1 MGP_129S1SvImJ_G0016318.1 mouse_genomes_project 1 94107003 94114365 - MGP_129S1SvImJ_P0021380 Olfr1414 protein_coding protein_coding MGP_129S1SvImJ_T0020524.1 MGP_129S1SvImJ_G0016152.1 mouse_genomes_project 1 75034494 75111472 - MGP_129S1SvImJ_P0020524 Usp37 protein_coding protein_coding MGP_129S1SvImJ_T0020525.1 MGP_129S1SvImJ_G0016152.1 mouse_genomes_project 1 75036716 75152553 - MGP_129S1SvImJ_P0020525 Usp37 protein_coding protein_coding MGP_129S1SvImJ_T0020526.1 MGP_129S1SvImJ_G0016152.1 mouse_genomes_project 1 75038114 75070434 - Usp37 protein_coding processed_transcript MGP_129S1SvImJ_T0020527.1 MGP_129S1SvImJ_G0016152.1 mouse_genomes_project 1 75052029 75111454 - Usp37 protein_coding retained_intron MGP_129S1SvImJ_T0020528.1 MGP_129S1SvImJ_G0016152.1 mouse_genomes_project 1 75100198 75111475 - MGP_129S1SvImJ_P0020528 Usp37 protein_coding protein_coding MGP_129S1SvImJ_T0020529.1 MGP_129S1SvImJ_G0016152.1 mouse_genomes_project 1 75104352 75111460 - Usp37 protein_coding retained_intron MGP_129S1SvImJ_T0020530.1 MGP_129S1SvImJ_G0016152.1 mouse_genomes_project 1 75104436 75111952 - Usp37 protein_coding processed_transcript MGP_129S1SvImJ_T0000702.1 MGP_129S1SvImJ_G0000639.1 mouse_genomes_project 1 154061512 154063819 - TEC TEC MGP_129S1SvImJ_T0006069.1 MGP_129S1SvImJ_G0005082.1 mouse_genomes_project 1 197588108 197598331 + Gm30932 lincRNA lincRNA MGP_129S1SvImJ_T0024301.1 MGP_129S1SvImJ_G0016957.1 mouse_genomes_project 1 200175057 200198623 - MGP_129S1SvImJ_P0024301 Diexf protein_coding protein_coding MGP_129S1SvImJ_T0024302.1 MGP_129S1SvImJ_G0016957.1 mouse_genomes_project 1 200176519 200201505 - MGP_129S1SvImJ_P0024302 Diexf protein_coding protein_coding MGP_129S1SvImJ_T0024303.1 MGP_129S1SvImJ_G0016957.1 mouse_genomes_project 1 200188351 200215942 - MGP_129S1SvImJ_P0024303 Diexf protein_coding protein_coding MGP_129S1SvImJ_T0024304.1 MGP_129S1SvImJ_G0016957.1 mouse_genomes_project 1 200188367 200215914 - MGP_129S1SvImJ_P0024304 Diexf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024305.1 MGP_129S1SvImJ_G0016957.1 mouse_genomes_project 1 200191702 200199326 - Diexf protein_coding retained_intron MGP_129S1SvImJ_T0024306.1 MGP_129S1SvImJ_G0016957.1 mouse_genomes_project 1 200204425 200206419 - Diexf protein_coding retained_intron MGP_129S1SvImJ_T0024307.1 MGP_129S1SvImJ_G0016957.1 mouse_genomes_project 1 200204590 200214015 - Diexf protein_coding processed_transcript MGP_129S1SvImJ_T0024308.1 MGP_129S1SvImJ_G0016957.1 mouse_genomes_project 1 200205989 200215877 - MGP_129S1SvImJ_P0024308 Diexf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024309.1 MGP_129S1SvImJ_G0016957.1 mouse_genomes_project 1 200206007 200207756 - Diexf protein_coding processed_transcript MGP_129S1SvImJ_T0000692.1 MGP_129S1SvImJ_G0000629.1 mouse_genomes_project 1 145776917 145778189 + TEC TEC MGP_129S1SvImJ_T0018961.1 MGP_129S1SvImJ_G0015843.1 mouse_genomes_project 1 10998556 11036464 - MGP_129S1SvImJ_P0018961 Lactb2 protein_coding protein_coding MGP_129S1SvImJ_T0018962.1 MGP_129S1SvImJ_G0015843.1 mouse_genomes_project 1 11005222 11013629 - Lactb2 protein_coding retained_intron MGP_129S1SvImJ_T0021072.1 MGP_129S1SvImJ_G0016251.1 mouse_genomes_project 1 87873369 87907219 + MGP_129S1SvImJ_P0021072 Cops7b protein_coding protein_coding MGP_129S1SvImJ_T0021073.1 MGP_129S1SvImJ_G0016251.1 mouse_genomes_project 1 87873403 87884221 + MGP_129S1SvImJ_P0021073 Cops7b protein_coding protein_coding MGP_129S1SvImJ_T0021074.1 MGP_129S1SvImJ_G0016251.1 mouse_genomes_project 1 87882027 87904352 + MGP_129S1SvImJ_P0021074 Cops7b protein_coding protein_coding MGP_129S1SvImJ_T0021075.1 MGP_129S1SvImJ_G0016251.1 mouse_genomes_project 1 87882058 87904178 + MGP_129S1SvImJ_P0021075 Cops7b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021076.1 MGP_129S1SvImJ_G0016251.1 mouse_genomes_project 1 87882069 87904830 + MGP_129S1SvImJ_P0021076 Cops7b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021077.1 MGP_129S1SvImJ_G0016251.1 mouse_genomes_project 1 87891667 87897002 + Cops7b protein_coding processed_transcript MGP_129S1SvImJ_T0023913.1 MGP_129S1SvImJ_G0016875.1 mouse_genomes_project 1 187320084 187338659 + MGP_129S1SvImJ_P0023913 Sde2 protein_coding protein_coding MGP_129S1SvImJ_T0023914.1 MGP_129S1SvImJ_G0016875.1 mouse_genomes_project 1 187332645 187336799 + Sde2 protein_coding retained_intron MGP_129S1SvImJ_T0019114.1 MGP_129S1SvImJ_G0015885.1 mouse_genomes_project 1 21573335 21642568 + MGP_129S1SvImJ_P0019114 B3gat2 protein_coding protein_coding MGP_129S1SvImJ_T0019115.1 MGP_129S1SvImJ_G0015885.1 mouse_genomes_project 1 21573959 21674017 + MGP_129S1SvImJ_P0019115 B3gat2 protein_coding protein_coding MGP_129S1SvImJ_T0005742.1 MGP_129S1SvImJ_G0004824.1 mouse_genomes_project 1 49845685 49846211 - Gm29665 lincRNA lincRNA MGP_129S1SvImJ_T0000390.1 MGP_129S1SvImJ_G0000332.1 mouse_genomes_project 1 4394256 4398288 + TEC TEC MGP_129S1SvImJ_T0019044.1 MGP_129S1SvImJ_G0015863.1 mouse_genomes_project 1 15288850 15329019 + MGP_129S1SvImJ_P0019044 Crispld1 protein_coding protein_coding MGP_129S1SvImJ_T0019045.1 MGP_129S1SvImJ_G0015863.1 mouse_genomes_project 1 15288864 15307715 + MGP_129S1SvImJ_P0019045 Crispld1 protein_coding protein_coding MGP_129S1SvImJ_T0019046.1 MGP_129S1SvImJ_G0015863.1 mouse_genomes_project 1 15288893 15329790 + MGP_129S1SvImJ_P0019046 Crispld1 protein_coding protein_coding MGP_129S1SvImJ_T0012102.1 MGP_129S1SvImJ_G0010191.1 mouse_genomes_project 1 67221272 67222912 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011273.1 MGP_129S1SvImJ_G0009389.1 mouse_genomes_project 1 99711539 99711851 + Gm25413 misc_RNA misc_RNA MGP_129S1SvImJ_T0006067.1 MGP_129S1SvImJ_G0005080.1 mouse_genomes_project 1 197375986 197390389 + Gm29678 lincRNA lincRNA MGP_129S1SvImJ_T0022666.1 MGP_129S1SvImJ_G0016595.1 mouse_genomes_project 1 158027716 158150117 - MGP_129S1SvImJ_P0022666 Lamc1 protein_coding protein_coding MGP_129S1SvImJ_T0022667.1 MGP_129S1SvImJ_G0016595.1 mouse_genomes_project 1 158027716 158038081 - MGP_129S1SvImJ_P0022667 Lamc1 protein_coding protein_coding MGP_129S1SvImJ_T0022668.1 MGP_129S1SvImJ_G0016595.1 mouse_genomes_project 1 158037698 158038355 - Lamc1 protein_coding retained_intron MGP_129S1SvImJ_T0022669.1 MGP_129S1SvImJ_G0016595.1 mouse_genomes_project 1 158037752 158049159 - MGP_129S1SvImJ_P0022669 Lamc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022670.1 MGP_129S1SvImJ_G0016595.1 mouse_genomes_project 1 158058479 158060324 - Lamc1 protein_coding retained_intron MGP_129S1SvImJ_T0009577.1 MGP_129S1SvImJ_G0007693.1 mouse_genomes_project 1 199075381 199075462 - Mir3473c miRNA miRNA MGP_129S1SvImJ_T0000703.1 MGP_129S1SvImJ_G0000640.1 mouse_genomes_project 1 154973848 154977137 + TEC TEC MGP_129S1SvImJ_T0002856.1 MGP_129S1SvImJ_G0002702.1 mouse_genomes_project 1 75515743 75520994 + Gm15841 antisense antisense MGP_129S1SvImJ_T0019438.1 MGP_129S1SvImJ_G0015942.1 mouse_genomes_project 1 36520207 36523814 + MGP_129S1SvImJ_P0019438 Lipt1 protein_coding protein_coding MGP_129S1SvImJ_T0019439.1 MGP_129S1SvImJ_G0015942.1 mouse_genomes_project 1 36520675 36524699 + MGP_129S1SvImJ_P0019439 Lipt1 protein_coding protein_coding MGP_129S1SvImJ_T0019440.1 MGP_129S1SvImJ_G0015942.1 mouse_genomes_project 1 36520843 36523931 + MGP_129S1SvImJ_P0019440 Lipt1 protein_coding protein_coding MGP_129S1SvImJ_T0019441.1 MGP_129S1SvImJ_G0015942.1 mouse_genomes_project 1 36521031 36524025 + MGP_129S1SvImJ_P0019441 Lipt1 protein_coding protein_coding MGP_129S1SvImJ_T0021914.1 MGP_129S1SvImJ_G0016434.1 mouse_genomes_project 1 133822615 133851431 - MGP_129S1SvImJ_P0021914 Cd55 protein_coding protein_coding MGP_129S1SvImJ_T0011942.1 MGP_129S1SvImJ_G0010031.1 mouse_genomes_project 1 19975217 19975664 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011948.1 MGP_129S1SvImJ_G0010037.1 mouse_genomes_project 1 22781051 22782250 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022992.1 MGP_129S1SvImJ_G0016651.1 mouse_genomes_project 1 166502905 166517692 - MGP_129S1SvImJ_P0022992 Prdx6 protein_coding protein_coding MGP_129S1SvImJ_T0022993.1 MGP_129S1SvImJ_G0016651.1 mouse_genomes_project 1 166505649 166517659 - MGP_129S1SvImJ_P0022993 Prdx6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022994.1 MGP_129S1SvImJ_G0016651.1 mouse_genomes_project 1 166506196 166517642 - Prdx6 protein_coding processed_transcript MGP_129S1SvImJ_T0022995.1 MGP_129S1SvImJ_G0016651.1 mouse_genomes_project 1 166506230 166517639 - MGP_129S1SvImJ_P0022995 Prdx6 protein_coding protein_coding MGP_129S1SvImJ_T0022996.1 MGP_129S1SvImJ_G0016651.1 mouse_genomes_project 1 166506267 166517639 - Prdx6 protein_coding processed_transcript MGP_129S1SvImJ_T0022997.1 MGP_129S1SvImJ_G0016651.1 mouse_genomes_project 1 166506353 166532802 - MGP_129S1SvImJ_P0022997 Prdx6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0022998.1 MGP_129S1SvImJ_G0016651.1 mouse_genomes_project 1 166506838 166517094 - Prdx6 protein_coding processed_transcript MGP_129S1SvImJ_T0022999.1 MGP_129S1SvImJ_G0016651.1 mouse_genomes_project 1 166510154 166517639 - Prdx6 protein_coding processed_transcript MGP_129S1SvImJ_T0023000.1 MGP_129S1SvImJ_G0016651.1 mouse_genomes_project 1 166515152 166517639 - Prdx6 protein_coding retained_intron MGP_129S1SvImJ_T0023001.1 MGP_129S1SvImJ_G0016651.1 mouse_genomes_project 1 166516110 166517639 - Prdx6 protein_coding retained_intron MGP_129S1SvImJ_T0012310.1 MGP_129S1SvImJ_G0010399.1 mouse_genomes_project 1 160086934 160087515 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005765.1 MGP_129S1SvImJ_G0004841.1 mouse_genomes_project 1 59451228 59455354 - Gm26813 lincRNA lincRNA MGP_129S1SvImJ_T0000769.1 MGP_129S1SvImJ_G0000706.1 mouse_genomes_project 1 182054896 182056832 - TEC TEC MGP_129S1SvImJ_T0099084.1 MGP_129S1SvImJ_G0037151.1 mouse_genomes_project 1 61557403 61557506 + Gm25839 snRNA snRNA MGP_129S1SvImJ_T0012048.1 MGP_129S1SvImJ_G0010137.1 mouse_genomes_project 1 52917293 52917616 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018989.1 MGP_129S1SvImJ_G0015853.1 mouse_genomes_project 1 13575737 13576525 - Rpl7 protein_coding processed_transcript MGP_129S1SvImJ_T0018990.1 MGP_129S1SvImJ_G0015853.1 mouse_genomes_project 1 13575737 13580761 - MGP_129S1SvImJ_P0018990 Rpl7 protein_coding protein_coding MGP_129S1SvImJ_T0018991.1 MGP_129S1SvImJ_G0015853.1 mouse_genomes_project 1 13575739 13580488 - MGP_129S1SvImJ_P0018991 Rpl7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0018992.1 MGP_129S1SvImJ_G0015853.1 mouse_genomes_project 1 13575748 13580512 - Rpl7 protein_coding retained_intron MGP_129S1SvImJ_T0018993.1 MGP_129S1SvImJ_G0015853.1 mouse_genomes_project 1 13575970 13577291 - Rpl7 protein_coding retained_intron MGP_129S1SvImJ_T0018994.1 MGP_129S1SvImJ_G0015853.1 mouse_genomes_project 1 13576222 13580337 - MGP_129S1SvImJ_P0018994 Rpl7 protein_coding protein_coding MGP_129S1SvImJ_T0018995.1 MGP_129S1SvImJ_G0015853.1 mouse_genomes_project 1 13576933 13580494 - Rpl7 protein_coding retained_intron MGP_129S1SvImJ_T0021950.1 MGP_129S1SvImJ_G0016445.1 mouse_genomes_project 1 134318341 134322008 - MGP_129S1SvImJ_P0021950 Il20 protein_coding protein_coding MGP_129S1SvImJ_T0021951.1 MGP_129S1SvImJ_G0016445.1 mouse_genomes_project 1 134318771 134321783 - MGP_129S1SvImJ_P0021951 Il20 protein_coding protein_coding MGP_129S1SvImJ_T0012177.1 MGP_129S1SvImJ_G0010266.1 mouse_genomes_project 1 104396438 104396705 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017115.1 MGP_129S1SvImJ_G0015126.1 mouse_genomes_project 1 178412262 178424511 - 4933439K11Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017116.1 MGP_129S1SvImJ_G0015126.1 mouse_genomes_project 1 178415776 178424648 - 4933439K11Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017117.1 MGP_129S1SvImJ_G0015126.1 mouse_genomes_project 1 178423091 178431939 - 4933439K11Rik processed_transcript antisense MGP_129S1SvImJ_T0017034.1 MGP_129S1SvImJ_G0015103.1 mouse_genomes_project 1 75733971 75748540 - Gm29253 processed_transcript processed_transcript MGP_129S1SvImJ_T0000669.1 MGP_129S1SvImJ_G0000607.1 mouse_genomes_project 1 141191509 141193425 + TEC TEC MGP_129S1SvImJ_T0022611.1 MGP_129S1SvImJ_G0016583.1 mouse_genomes_project 1 156305870 156388508 + MGP_129S1SvImJ_P0022611 Fam129a protein_coding protein_coding MGP_129S1SvImJ_T0022612.1 MGP_129S1SvImJ_G0016583.1 mouse_genomes_project 1 156306057 156468891 + MGP_129S1SvImJ_P0022612 Fam129a protein_coding protein_coding MGP_129S1SvImJ_T0022613.1 MGP_129S1SvImJ_G0016583.1 mouse_genomes_project 1 156306136 156466294 + MGP_129S1SvImJ_P0022613 Fam129a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022614.1 MGP_129S1SvImJ_G0016583.1 mouse_genomes_project 1 156306180 156436426 + MGP_129S1SvImJ_P0022614 Fam129a protein_coding protein_coding MGP_129S1SvImJ_T0022615.1 MGP_129S1SvImJ_G0016583.1 mouse_genomes_project 1 156421644 156466294 + Fam129a protein_coding processed_transcript MGP_129S1SvImJ_T0023662.1 MGP_129S1SvImJ_G0016811.1 mouse_genomes_project 1 179455760 179473698 - MGP_129S1SvImJ_P0023662 BC094916 protein_coding protein_coding MGP_129S1SvImJ_T0020840.1 MGP_129S1SvImJ_G0016202.1 mouse_genomes_project 1 79400545 79415677 + MGP_129S1SvImJ_P0020840 Utp14b protein_coding protein_coding MGP_129S1SvImJ_T0020841.1 MGP_129S1SvImJ_G0016202.1 mouse_genomes_project 1 79400947 79410148 + MGP_129S1SvImJ_P0020841 Utp14b protein_coding protein_coding MGP_129S1SvImJ_T0019836.1 MGP_129S1SvImJ_G0016023.1 mouse_genomes_project 1 53462908 53875062 - MGP_129S1SvImJ_P0019836 Hecw2 protein_coding protein_coding MGP_129S1SvImJ_T0019837.1 MGP_129S1SvImJ_G0016023.1 mouse_genomes_project 1 53462914 53876048 - MGP_129S1SvImJ_P0019837 Hecw2 protein_coding protein_coding MGP_129S1SvImJ_T0019838.1 MGP_129S1SvImJ_G0016023.1 mouse_genomes_project 1 53488552 53496968 - Hecw2 protein_coding processed_transcript MGP_129S1SvImJ_T0019839.1 MGP_129S1SvImJ_G0016023.1 mouse_genomes_project 1 53494813 53523791 - Hecw2 protein_coding processed_transcript MGP_129S1SvImJ_T0019840.1 MGP_129S1SvImJ_G0016023.1 mouse_genomes_project 1 53588434 53876048 - MGP_129S1SvImJ_P0019840 Hecw2 protein_coding protein_coding MGP_129S1SvImJ_T0019841.1 MGP_129S1SvImJ_G0016023.1 mouse_genomes_project 1 53599107 53876182 - Hecw2 protein_coding retained_intron MGP_129S1SvImJ_T0021130.1 MGP_129S1SvImJ_G0016264.1 mouse_genomes_project 1 88739899 88748251 - MGP_129S1SvImJ_P0021130 Kcnj13 protein_coding protein_coding MGP_129S1SvImJ_T0021131.1 MGP_129S1SvImJ_G0016264.1 mouse_genomes_project 1 88740538 88742926 - MGP_129S1SvImJ_P0021131 Kcnj13 protein_coding protein_coding MGP_129S1SvImJ_T0023698.1 MGP_129S1SvImJ_G0016835.1 mouse_genomes_project 1 181147007 181585018 - MGP_129S1SvImJ_P0023698 Rgs7 protein_coding protein_coding MGP_129S1SvImJ_T0023699.1 MGP_129S1SvImJ_G0016835.1 mouse_genomes_project 1 181147008 181584794 - MGP_129S1SvImJ_P0023699 Rgs7 protein_coding protein_coding MGP_129S1SvImJ_T0023700.1 MGP_129S1SvImJ_G0016835.1 mouse_genomes_project 1 181147137 181584908 - MGP_129S1SvImJ_P0023700 Rgs7 protein_coding protein_coding MGP_129S1SvImJ_T0023701.1 MGP_129S1SvImJ_G0016835.1 mouse_genomes_project 1 181147654 181176019 - MGP_129S1SvImJ_P0023701 Rgs7 protein_coding protein_coding MGP_129S1SvImJ_T0023702.1 MGP_129S1SvImJ_G0016835.1 mouse_genomes_project 1 181147654 181176079 - MGP_129S1SvImJ_P0023702 Rgs7 protein_coding protein_coding MGP_129S1SvImJ_T0023703.1 MGP_129S1SvImJ_G0016835.1 mouse_genomes_project 1 181147654 181583644 - MGP_129S1SvImJ_P0023703 Rgs7 protein_coding protein_coding MGP_129S1SvImJ_T0023704.1 MGP_129S1SvImJ_G0016835.1 mouse_genomes_project 1 181147655 181168533 - MGP_129S1SvImJ_P0023704 Rgs7 protein_coding protein_coding MGP_129S1SvImJ_T0023705.1 MGP_129S1SvImJ_G0016835.1 mouse_genomes_project 1 181164421 181168053 - Rgs7 protein_coding retained_intron MGP_129S1SvImJ_T0021751.1 MGP_129S1SvImJ_G0016399.1 mouse_genomes_project 1 122682269 122687587 - MGP_129S1SvImJ_P0021751 Tmem177 protein_coding protein_coding MGP_129S1SvImJ_T0021994.1 MGP_129S1SvImJ_G0016456.1 mouse_genomes_project 1 135080562 135108783 + MGP_129S1SvImJ_P0021994 Ctse protein_coding protein_coding MGP_129S1SvImJ_T0021995.1 MGP_129S1SvImJ_G0016456.1 mouse_genomes_project 1 135080750 135108781 + MGP_129S1SvImJ_P0021995 Ctse protein_coding protein_coding MGP_129S1SvImJ_T0021996.1 MGP_129S1SvImJ_G0016456.1 mouse_genomes_project 1 135095202 135098740 + Ctse protein_coding retained_intron MGP_129S1SvImJ_T0011929.1 MGP_129S1SvImJ_G0010018.1 mouse_genomes_project 1 16312610 16313519 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022187.1 MGP_129S1SvImJ_G0016496.1 mouse_genomes_project 1 137671717 137684248 + MGP_129S1SvImJ_P0022187 Fmod protein_coding protein_coding MGP_129S1SvImJ_T0022188.1 MGP_129S1SvImJ_G0016496.1 mouse_genomes_project 1 137671959 137674938 + MGP_129S1SvImJ_P0022188 Fmod protein_coding protein_coding MGP_129S1SvImJ_T0011875.1 MGP_129S1SvImJ_G0009964.1 mouse_genomes_project 1 1806570 1807639 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002775.1 MGP_129S1SvImJ_G0002644.1 mouse_genomes_project 1 12184052 12207927 + Gm9947 antisense antisense MGP_129S1SvImJ_T0002776.1 MGP_129S1SvImJ_G0002644.1 mouse_genomes_project 1 12186575 12189500 + Gm9947 antisense antisense MGP_129S1SvImJ_T0023637.1 MGP_129S1SvImJ_G0016800.1 mouse_genomes_project 1 179091071 179092134 - MGP_129S1SvImJ_P0023637 Olfr1406 protein_coding protein_coding MGP_129S1SvImJ_T0023638.1 MGP_129S1SvImJ_G0016800.1 mouse_genomes_project 1 179091798 179098164 - MGP_129S1SvImJ_P0023638 Olfr1406 protein_coding protein_coding MGP_129S1SvImJ_T0021467.1 MGP_129S1SvImJ_G0016341.1 mouse_genomes_project 1 94995326 95029350 + MGP_129S1SvImJ_P0021467 Ano7 protein_coding protein_coding MGP_129S1SvImJ_T0021468.1 MGP_129S1SvImJ_G0016341.1 mouse_genomes_project 1 94995326 95028446 + MGP_129S1SvImJ_P0021468 Ano7 protein_coding protein_coding MGP_129S1SvImJ_T0021469.1 MGP_129S1SvImJ_G0016341.1 mouse_genomes_project 1 95026903 95028616 + MGP_129S1SvImJ_P0021469 Ano7 protein_coding protein_coding MGP_129S1SvImJ_T0019471.1 MGP_129S1SvImJ_G0015949.1 mouse_genomes_project 1 36715256 36794406 - MGP_129S1SvImJ_P0019471 Rev1 protein_coding protein_coding MGP_129S1SvImJ_T0019472.1 MGP_129S1SvImJ_G0015949.1 mouse_genomes_project 1 36715266 36750608 - Rev1 protein_coding retained_intron MGP_129S1SvImJ_T0019473.1 MGP_129S1SvImJ_G0015949.1 mouse_genomes_project 1 36715770 36716721 - Rev1 protein_coding retained_intron MGP_129S1SvImJ_T0019474.1 MGP_129S1SvImJ_G0015949.1 mouse_genomes_project 1 36718992 36720176 - Rev1 protein_coding retained_intron MGP_129S1SvImJ_T0019475.1 MGP_129S1SvImJ_G0015949.1 mouse_genomes_project 1 36730130 36746259 - MGP_129S1SvImJ_P0019475 Rev1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019476.1 MGP_129S1SvImJ_G0015949.1 mouse_genomes_project 1 36733899 36748130 - MGP_129S1SvImJ_P0019476 Rev1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019477.1 MGP_129S1SvImJ_G0015949.1 mouse_genomes_project 1 36737124 36743837 - Rev1 protein_coding processed_transcript MGP_129S1SvImJ_T0019478.1 MGP_129S1SvImJ_G0015949.1 mouse_genomes_project 1 36741553 36746325 - Rev1 protein_coding retained_intron MGP_129S1SvImJ_T0019479.1 MGP_129S1SvImJ_G0015949.1 mouse_genomes_project 1 36754608 36793045 - MGP_129S1SvImJ_P0019479 Rev1 protein_coding protein_coding MGP_129S1SvImJ_T0019480.1 MGP_129S1SvImJ_G0015949.1 mouse_genomes_project 1 36762495 36793061 - MGP_129S1SvImJ_P0019480 Rev1 protein_coding protein_coding MGP_129S1SvImJ_T0019481.1 MGP_129S1SvImJ_G0015949.1 mouse_genomes_project 1 36771269 36794545 - MGP_129S1SvImJ_P0019481 Rev1 protein_coding protein_coding MGP_129S1SvImJ_T0000440.1 MGP_129S1SvImJ_G0000380.1 mouse_genomes_project 1 23557497 23561481 - TEC TEC MGP_129S1SvImJ_T0021210.1 MGP_129S1SvImJ_G0016281.1 mouse_genomes_project 1 89615504 89628377 + MGP_129S1SvImJ_P0021210 Ugt1a1 protein_coding protein_coding MGP_129S1SvImJ_T0020988.1 MGP_129S1SvImJ_G0016232.1 mouse_genomes_project 1 86802594 86826631 + MGP_129S1SvImJ_P0020988 protein_coding protein_coding MGP_129S1SvImJ_T0002790.1 MGP_129S1SvImJ_G0002654.1 mouse_genomes_project 1 18889158 18911043 - Gm28836 antisense antisense MGP_129S1SvImJ_T0005967.1 MGP_129S1SvImJ_G0005004.1 mouse_genomes_project 1 159137672 159152307 + 4930532M18Rik lincRNA lincRNA MGP_129S1SvImJ_T0005968.1 MGP_129S1SvImJ_G0005004.1 mouse_genomes_project 1 159138985 159152128 + 4930532M18Rik lincRNA lincRNA MGP_129S1SvImJ_T0012356.1 MGP_129S1SvImJ_G0010445.1 mouse_genomes_project 1 182782895 182783553 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019774.1 MGP_129S1SvImJ_G0016009.1 mouse_genomes_project 1 52149859 52171068 + MGP_129S1SvImJ_P0019774 Nemp2 protein_coding protein_coding MGP_129S1SvImJ_T0019775.1 MGP_129S1SvImJ_G0016009.1 mouse_genomes_project 1 52149893 52171068 + MGP_129S1SvImJ_P0019775 Nemp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019776.1 MGP_129S1SvImJ_G0016009.1 mouse_genomes_project 1 52149903 52169785 + MGP_129S1SvImJ_P0019776 Nemp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019777.1 MGP_129S1SvImJ_G0016009.1 mouse_genomes_project 1 52149908 52169878 + Nemp2 protein_coding retained_intron MGP_129S1SvImJ_T0019778.1 MGP_129S1SvImJ_G0016009.1 mouse_genomes_project 1 52149953 52169851 + MGP_129S1SvImJ_P0019778 Nemp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019779.1 MGP_129S1SvImJ_G0016009.1 mouse_genomes_project 1 52160672 52171068 + Nemp2 protein_coding retained_intron MGP_129S1SvImJ_T0019780.1 MGP_129S1SvImJ_G0016009.1 mouse_genomes_project 1 52161140 52169805 + Nemp2 protein_coding processed_transcript MGP_129S1SvImJ_T0019781.1 MGP_129S1SvImJ_G0016009.1 mouse_genomes_project 1 52164337 52169176 + Nemp2 protein_coding retained_intron MGP_129S1SvImJ_T0018947.1 MGP_129S1SvImJ_G0015841.1 mouse_genomes_project 1 10507453 10746077 - MGP_129S1SvImJ_P0018947 Ncoa2 protein_coding protein_coding MGP_129S1SvImJ_T0018948.1 MGP_129S1SvImJ_G0015841.1 mouse_genomes_project 1 10507507 10747721 - MGP_129S1SvImJ_P0018948 Ncoa2 protein_coding protein_coding MGP_129S1SvImJ_T0018949.1 MGP_129S1SvImJ_G0015841.1 mouse_genomes_project 1 10510826 10747721 - MGP_129S1SvImJ_P0018949 Ncoa2 protein_coding protein_coding MGP_129S1SvImJ_T0018950.1 MGP_129S1SvImJ_G0015841.1 mouse_genomes_project 1 10515036 10516351 - Ncoa2 protein_coding processed_transcript MGP_129S1SvImJ_T0018951.1 MGP_129S1SvImJ_G0015841.1 mouse_genomes_project 1 10516320 10518230 - Ncoa2 protein_coding retained_intron MGP_129S1SvImJ_T0018952.1 MGP_129S1SvImJ_G0015841.1 mouse_genomes_project 1 10518151 10520728 - Ncoa2 protein_coding retained_intron MGP_129S1SvImJ_T0018953.1 MGP_129S1SvImJ_G0015841.1 mouse_genomes_project 1 10535736 10747721 - Ncoa2 protein_coding retained_intron MGP_129S1SvImJ_T0018954.1 MGP_129S1SvImJ_G0015841.1 mouse_genomes_project 1 10537163 10747667 - Ncoa2 protein_coding retained_intron MGP_129S1SvImJ_T0018955.1 MGP_129S1SvImJ_G0015841.1 mouse_genomes_project 1 10554673 10746067 - Ncoa2 protein_coding retained_intron MGP_129S1SvImJ_T0018956.1 MGP_129S1SvImJ_G0015841.1 mouse_genomes_project 1 10557006 10747667 - Ncoa2 protein_coding retained_intron MGP_129S1SvImJ_T0018957.1 MGP_129S1SvImJ_G0015841.1 mouse_genomes_project 1 10562505 10669266 - MGP_129S1SvImJ_P0018957 Ncoa2 protein_coding protein_coding MGP_129S1SvImJ_T0000403.1 MGP_129S1SvImJ_G0000345.1 mouse_genomes_project 1 9002028 9004153 + TEC TEC MGP_129S1SvImJ_T0022514.1 MGP_129S1SvImJ_G0016565.1 mouse_genomes_project 1 148343406 148348218 - MGP_129S1SvImJ_P0022514 Rgs2 protein_coding protein_coding MGP_129S1SvImJ_T0022515.1 MGP_129S1SvImJ_G0016565.1 mouse_genomes_project 1 148345748 148348192 - MGP_129S1SvImJ_P0022515 Rgs2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022516.1 MGP_129S1SvImJ_G0016565.1 mouse_genomes_project 1 148345951 148348089 - MGP_129S1SvImJ_P0022516 Rgs2 protein_coding protein_coding MGP_129S1SvImJ_T0022517.1 MGP_129S1SvImJ_G0016565.1 mouse_genomes_project 1 148346584 148348178 - Rgs2 protein_coding retained_intron MGP_129S1SvImJ_T0019877.1 MGP_129S1SvImJ_G0016029.1 mouse_genomes_project 1 54763041 54782931 + MGP_129S1SvImJ_P0019877 Coq10b protein_coding protein_coding MGP_129S1SvImJ_T0019878.1 MGP_129S1SvImJ_G0016029.1 mouse_genomes_project 1 54763041 54782182 + MGP_129S1SvImJ_P0019878 Coq10b protein_coding protein_coding MGP_129S1SvImJ_T0019879.1 MGP_129S1SvImJ_G0016029.1 mouse_genomes_project 1 54763140 54764365 + Coq10b protein_coding retained_intron MGP_129S1SvImJ_T0019880.1 MGP_129S1SvImJ_G0016029.1 mouse_genomes_project 1 54769867 54771986 + Coq10b protein_coding retained_intron MGP_129S1SvImJ_T0000677.1 MGP_129S1SvImJ_G0000614.1 mouse_genomes_project 1 141933222 141936325 + TEC TEC MGP_129S1SvImJ_T0023477.1 MGP_129S1SvImJ_G0016758.1 mouse_genomes_project 1 177154492 177156836 - MGP_129S1SvImJ_P0023477 Klhdc9 protein_coding protein_coding MGP_129S1SvImJ_T0022251.1 MGP_129S1SvImJ_G0016512.1 mouse_genomes_project 1 138337067 138445387 + MGP_129S1SvImJ_P0022251 Syt2 protein_coding protein_coding MGP_129S1SvImJ_T0022252.1 MGP_129S1SvImJ_G0016512.1 mouse_genomes_project 1 138337071 138452931 + MGP_129S1SvImJ_P0022252 Syt2 protein_coding protein_coding MGP_129S1SvImJ_T0022253.1 MGP_129S1SvImJ_G0016512.1 mouse_genomes_project 1 138406922 138456659 + MGP_129S1SvImJ_P0022253 Syt2 protein_coding protein_coding MGP_129S1SvImJ_T0022254.1 MGP_129S1SvImJ_G0016512.1 mouse_genomes_project 1 138452097 138466112 + Syt2 protein_coding processed_transcript MGP_129S1SvImJ_T0020352.1 MGP_129S1SvImJ_G0016117.1 mouse_genomes_project 1 67195267 67216462 - MGP_129S1SvImJ_P0020352 Myl1 protein_coding protein_coding MGP_129S1SvImJ_T0020353.1 MGP_129S1SvImJ_G0016117.1 mouse_genomes_project 1 67195267 67206851 - MGP_129S1SvImJ_P0020353 Myl1 protein_coding protein_coding MGP_129S1SvImJ_T0020354.1 MGP_129S1SvImJ_G0016117.1 mouse_genomes_project 1 67195269 67206568 - MGP_129S1SvImJ_P0020354 Myl1 protein_coding protein_coding MGP_129S1SvImJ_T0020355.1 MGP_129S1SvImJ_G0016117.1 mouse_genomes_project 1 67195980 67206564 - Myl1 protein_coding processed_transcript MGP_129S1SvImJ_T0020356.1 MGP_129S1SvImJ_G0016117.1 mouse_genomes_project 1 67197025 67206547 - MGP_129S1SvImJ_P0020356 Myl1 protein_coding protein_coding MGP_129S1SvImJ_T0020357.1 MGP_129S1SvImJ_G0016117.1 mouse_genomes_project 1 67197619 67216702 - MGP_129S1SvImJ_P0020357 Myl1 protein_coding protein_coding MGP_129S1SvImJ_T0020358.1 MGP_129S1SvImJ_G0016117.1 mouse_genomes_project 1 67201386 67205904 - Myl1 protein_coding retained_intron MGP_129S1SvImJ_T0020359.1 MGP_129S1SvImJ_G0016117.1 mouse_genomes_project 1 67215781 67216722 - Myl1 protein_coding retained_intron MGP_129S1SvImJ_T0020289.1 MGP_129S1SvImJ_G0016108.1 mouse_genomes_project 1 65359109 65379664 - MGP_129S1SvImJ_P0020289 Idh1 protein_coding protein_coding MGP_129S1SvImJ_T0020290.1 MGP_129S1SvImJ_G0016108.1 mouse_genomes_project 1 65359111 65387010 - MGP_129S1SvImJ_P0020290 Idh1 protein_coding protein_coding MGP_129S1SvImJ_T0020291.1 MGP_129S1SvImJ_G0016108.1 mouse_genomes_project 1 65366691 65386969 - MGP_129S1SvImJ_P0020291 Idh1 protein_coding protein_coding MGP_129S1SvImJ_T0020292.1 MGP_129S1SvImJ_G0016108.1 mouse_genomes_project 1 65366736 65387031 - MGP_129S1SvImJ_P0020292 Idh1 protein_coding protein_coding MGP_129S1SvImJ_T0020293.1 MGP_129S1SvImJ_G0016108.1 mouse_genomes_project 1 65369081 65376047 - MGP_129S1SvImJ_P0020293 Idh1 protein_coding protein_coding MGP_129S1SvImJ_T0020294.1 MGP_129S1SvImJ_G0016108.1 mouse_genomes_project 1 65371612 65386990 - MGP_129S1SvImJ_P0020294 Idh1 protein_coding protein_coding MGP_129S1SvImJ_T0020295.1 MGP_129S1SvImJ_G0016108.1 mouse_genomes_project 1 65375778 65387010 - MGP_129S1SvImJ_P0020295 Idh1 protein_coding protein_coding MGP_129S1SvImJ_T0018756.1 MGP_129S1SvImJ_G0015812.1 mouse_genomes_project 1 1845056 1926650 + MGP_129S1SvImJ_P0018756 Gm37988 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023884.1 MGP_129S1SvImJ_G0016868.1 mouse_genomes_project 1 186753050 186854478 + MGP_129S1SvImJ_P0023884 Itpkb protein_coding protein_coding MGP_129S1SvImJ_T0023885.1 MGP_129S1SvImJ_G0016868.1 mouse_genomes_project 1 186756431 186761020 + Itpkb protein_coding retained_intron MGP_129S1SvImJ_T0021244.1 MGP_129S1SvImJ_G0016293.1 mouse_genomes_project 1 91508065 91625947 - MGP_129S1SvImJ_P0021244 Iqca protein_coding protein_coding MGP_129S1SvImJ_T0021245.1 MGP_129S1SvImJ_G0016293.1 mouse_genomes_project 1 91508068 91557754 - Iqca protein_coding processed_transcript MGP_129S1SvImJ_T0021246.1 MGP_129S1SvImJ_G0016293.1 mouse_genomes_project 1 91508559 91625721 - MGP_129S1SvImJ_P0021246 Iqca protein_coding unknown_likely_coding MGP_129S1SvImJ_T0021247.1 MGP_129S1SvImJ_G0016293.1 mouse_genomes_project 1 91525190 91532690 - MGP_129S1SvImJ_P0021247 Iqca protein_coding protein_coding MGP_129S1SvImJ_T0021248.1 MGP_129S1SvImJ_G0016293.1 mouse_genomes_project 1 91549885 91557754 - Iqca protein_coding processed_transcript MGP_129S1SvImJ_T0021249.1 MGP_129S1SvImJ_G0016293.1 mouse_genomes_project 1 91598476 91625947 - Iqca protein_coding processed_transcript MGP_129S1SvImJ_T0009573.1 MGP_129S1SvImJ_G0007689.1 mouse_genomes_project 1 191958454 191958523 + Mir664 miRNA miRNA MGP_129S1SvImJ_T0011956.1 MGP_129S1SvImJ_G0010045.1 mouse_genomes_project 1 25982069 25983942 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000546.1 MGP_129S1SvImJ_G0000485.1 mouse_genomes_project 1 75572226 75573813 + TEC TEC MGP_129S1SvImJ_T0098784.1 MGP_129S1SvImJ_G0036868.1 mouse_genomes_project 1 91020514 91028382 + Gm28499 sense_intronic sense_intronic MGP_129S1SvImJ_T0023779.1 MGP_129S1SvImJ_G0016850.1 mouse_genomes_project 1 183965512 184000762 - MGP_129S1SvImJ_P0023779 Adss protein_coding protein_coding MGP_129S1SvImJ_T0023780.1 MGP_129S1SvImJ_G0016850.1 mouse_genomes_project 1 183965725 184000645 - MGP_129S1SvImJ_P0023780 Adss protein_coding unknown_likely_coding MGP_129S1SvImJ_T0023781.1 MGP_129S1SvImJ_G0016850.1 mouse_genomes_project 1 183965726 183972351 - Adss protein_coding retained_intron MGP_129S1SvImJ_T0023782.1 MGP_129S1SvImJ_G0016850.1 mouse_genomes_project 1 183978367 184000752 - Adss protein_coding retained_intron MGP_129S1SvImJ_T0011877.1 MGP_129S1SvImJ_G0009966.1 mouse_genomes_project 1 2103367 2104955 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005688.1 MGP_129S1SvImJ_G0004788.1 mouse_genomes_project 1 22900088 22900740 - Gm29414 lincRNA lincRNA MGP_129S1SvImJ_T0005895.1 MGP_129S1SvImJ_G0004946.1 mouse_genomes_project 1 122278855 122285544 - 3830432H09Rik lincRNA lincRNA MGP_129S1SvImJ_T0005896.1 MGP_129S1SvImJ_G0004946.1 mouse_genomes_project 1 122279668 122284624 - 3830432H09Rik lincRNA lincRNA MGP_129S1SvImJ_T0020374.1 MGP_129S1SvImJ_G0016121.1 mouse_genomes_project 1 69895137 70049114 - MGP_129S1SvImJ_P0020374 Ikzf2 protein_coding protein_coding MGP_129S1SvImJ_T0020375.1 MGP_129S1SvImJ_G0016121.1 mouse_genomes_project 1 69895682 70050465 - MGP_129S1SvImJ_P0020375 Ikzf2 protein_coding protein_coding MGP_129S1SvImJ_T0020376.1 MGP_129S1SvImJ_G0016121.1 mouse_genomes_project 1 69895868 70047379 - MGP_129S1SvImJ_P0020376 Ikzf2 protein_coding protein_coding MGP_129S1SvImJ_T0020377.1 MGP_129S1SvImJ_G0016121.1 mouse_genomes_project 1 69895868 70047379 - MGP_129S1SvImJ_P0020377 Ikzf2 protein_coding protein_coding MGP_129S1SvImJ_T0020378.1 MGP_129S1SvImJ_G0016121.1 mouse_genomes_project 1 69895868 70050499 - MGP_129S1SvImJ_P0020378 Ikzf2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0020379.1 MGP_129S1SvImJ_G0016121.1 mouse_genomes_project 1 69895868 70047379 - MGP_129S1SvImJ_P0020379 Ikzf2 protein_coding protein_coding MGP_129S1SvImJ_T0020380.1 MGP_129S1SvImJ_G0016121.1 mouse_genomes_project 1 69936067 70048528 - MGP_129S1SvImJ_P0020380 Ikzf2 protein_coding protein_coding MGP_129S1SvImJ_T0020381.1 MGP_129S1SvImJ_G0016121.1 mouse_genomes_project 1 70044781 70047758 - Ikzf2 protein_coding retained_intron MGP_129S1SvImJ_T0020382.1 MGP_129S1SvImJ_G0016121.1 mouse_genomes_project 1 70044782 70050360 - Ikzf2 protein_coding retained_intron MGP_129S1SvImJ_T0012360.1 MGP_129S1SvImJ_G0010449.1 mouse_genomes_project 1 183991162 183991768 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020502.1 MGP_129S1SvImJ_G0016148.1 mouse_genomes_project 1 74959250 74966300 + MGP_129S1SvImJ_P0020502 Catip protein_coding protein_coding MGP_129S1SvImJ_T0020503.1 MGP_129S1SvImJ_G0016148.1 mouse_genomes_project 1 74959508 74964777 + MGP_129S1SvImJ_P0020503 Catip protein_coding protein_coding MGP_129S1SvImJ_T0020504.1 MGP_129S1SvImJ_G0016148.1 mouse_genomes_project 1 74959584 74966129 + MGP_129S1SvImJ_P0020504 Catip protein_coding protein_coding MGP_129S1SvImJ_T0020505.1 MGP_129S1SvImJ_G0016148.1 mouse_genomes_project 1 74961673 74963720 + Catip protein_coding retained_intron MGP_129S1SvImJ_T0022020.1 MGP_129S1SvImJ_G0016463.1 mouse_genomes_project 1 135414797 135434858 + MGP_129S1SvImJ_P0022020 Slc45a3 protein_coding protein_coding MGP_129S1SvImJ_T0022021.1 MGP_129S1SvImJ_G0016463.1 mouse_genomes_project 1 135422491 135434853 + MGP_129S1SvImJ_P0022021 Slc45a3 protein_coding protein_coding MGP_129S1SvImJ_T0022022.1 MGP_129S1SvImJ_G0016463.1 mouse_genomes_project 1 135428607 135429834 + MGP_129S1SvImJ_P0022022 Slc45a3 protein_coding protein_coding MGP_129S1SvImJ_T0022023.1 MGP_129S1SvImJ_G0016463.1 mouse_genomes_project 1 135430852 135433795 + Slc45a3 protein_coding processed_transcript MGP_129S1SvImJ_T0102059.1 MGP_129S1SvImJ_G0039894.1 mouse_genomes_project 1 89418163 89419024 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0022017.1 MGP_129S1SvImJ_G0016462.1 mouse_genomes_project 1 135354938 135381268 + MGP_129S1SvImJ_P0022017 Nucks1 protein_coding protein_coding MGP_129S1SvImJ_T0022018.1 MGP_129S1SvImJ_G0016462.1 mouse_genomes_project 1 135354960 135384910 + MGP_129S1SvImJ_P0022018 Nucks1 protein_coding protein_coding MGP_129S1SvImJ_T0022019.1 MGP_129S1SvImJ_G0016462.1 mouse_genomes_project 1 135377751 135378660 + Nucks1 protein_coding retained_intron MGP_129S1SvImJ_T0000791.1 MGP_129S1SvImJ_G0000727.1 mouse_genomes_project 1 186905786 186909519 - TEC TEC MGP_129S1SvImJ_T0023131.1 MGP_129S1SvImJ_G0016683.1 mouse_genomes_project 1 169725777 169745405 - MGP_129S1SvImJ_P0023131 Blzf1 protein_coding protein_coding MGP_129S1SvImJ_T0023132.1 MGP_129S1SvImJ_G0016683.1 mouse_genomes_project 1 169727366 169745410 - MGP_129S1SvImJ_P0023132 Blzf1 protein_coding protein_coding MGP_129S1SvImJ_T0023133.1 MGP_129S1SvImJ_G0016683.1 mouse_genomes_project 1 169728107 169745410 - MGP_129S1SvImJ_P0023133 Blzf1 protein_coding protein_coding MGP_129S1SvImJ_T0023134.1 MGP_129S1SvImJ_G0016683.1 mouse_genomes_project 1 169737462 169745193 - Blzf1 protein_coding processed_transcript MGP_129S1SvImJ_T0023136.1 MGP_129S1SvImJ_G0016683.1 mouse_genomes_project 1 169743122 169745392 - Blzf1 protein_coding retained_intron MGP_129S1SvImJ_T0000643.1 MGP_129S1SvImJ_G0000582.1 mouse_genomes_project 1 132675242 132676201 + TEC TEC MGP_129S1SvImJ_T0003007.1 MGP_129S1SvImJ_G0002824.1 mouse_genomes_project 1 198042498 198043335 + A230020J21Rik antisense antisense MGP_129S1SvImJ_T0003008.1 MGP_129S1SvImJ_G0002824.1 mouse_genomes_project 1 198042499 198046913 + A230020J21Rik antisense antisense MGP_129S1SvImJ_T0023002.1 MGP_129S1SvImJ_G0016652.1 mouse_genomes_project 1 166670569 166693550 + MGP_129S1SvImJ_P0023002 Tnfsf4 protein_coding protein_coding MGP_129S1SvImJ_T0002833.1 MGP_129S1SvImJ_G0002688.1 mouse_genomes_project 1 59100302 59117673 + Gm29017 antisense antisense MGP_129S1SvImJ_T0006033.1 MGP_129S1SvImJ_G0005055.1 mouse_genomes_project 1 188416479 188418095 - Gm5533 lincRNA lincRNA MGP_129S1SvImJ_T0005860.1 MGP_129S1SvImJ_G0004918.1 mouse_genomes_project 1 94175721 94177981 + Gm28479 lincRNA lincRNA MGP_129S1SvImJ_T0011906.1 MGP_129S1SvImJ_G0009995.1 mouse_genomes_project 1 7048838 7049195 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021731.1 MGP_129S1SvImJ_G0016397.1 mouse_genomes_project 1 122297516 122407064 - MGP_129S1SvImJ_P0021731 Epb41l5 protein_coding protein_coding MGP_129S1SvImJ_T0021732.1 MGP_129S1SvImJ_G0016397.1 mouse_genomes_project 1 122300610 122407062 - MGP_129S1SvImJ_P0021732 Epb41l5 protein_coding protein_coding MGP_129S1SvImJ_T0021733.1 MGP_129S1SvImJ_G0016397.1 mouse_genomes_project 1 122306714 122354612 - Epb41l5 protein_coding retained_intron MGP_129S1SvImJ_T0021734.1 MGP_129S1SvImJ_G0016397.1 mouse_genomes_project 1 122332443 122334731 - Epb41l5 protein_coding retained_intron MGP_129S1SvImJ_T0021735.1 MGP_129S1SvImJ_G0016397.1 mouse_genomes_project 1 122345048 122407128 - MGP_129S1SvImJ_P0021735 Epb41l5 protein_coding protein_coding MGP_129S1SvImJ_T0021736.1 MGP_129S1SvImJ_G0016397.1 mouse_genomes_project 1 122349380 122406745 - MGP_129S1SvImJ_P0021736 Epb41l5 protein_coding protein_coding MGP_129S1SvImJ_T0021737.1 MGP_129S1SvImJ_G0016397.1 mouse_genomes_project 1 122349748 122353547 - Epb41l5 protein_coding retained_intron MGP_129S1SvImJ_T0021738.1 MGP_129S1SvImJ_G0016397.1 mouse_genomes_project 1 122372187 122389657 - Epb41l5 protein_coding retained_intron MGP_129S1SvImJ_T0021739.1 MGP_129S1SvImJ_G0016397.1 mouse_genomes_project 1 122376481 122406752 - MGP_129S1SvImJ_P0021739 Epb41l5 protein_coding protein_coding MGP_129S1SvImJ_T0006017.1 MGP_129S1SvImJ_G0005044.1 mouse_genomes_project 1 183647653 183656538 + Gm37306 lincRNA lincRNA MGP_129S1SvImJ_T0101584.1 MGP_129S1SvImJ_G0039644.1 mouse_genomes_project 1 161816811 161819441 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101585.1 MGP_129S1SvImJ_G0039644.1 mouse_genomes_project 1 161817133 161817460 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0098721.1 MGP_129S1SvImJ_G0036806.1 mouse_genomes_project 1 89149575 89149847 + Gm25395 scaRNA scaRNA MGP_129S1SvImJ_T0005859.1 MGP_129S1SvImJ_G0004917.1 mouse_genomes_project 1 93908375 93913754 + Gm29099 lincRNA lincRNA MGP_129S1SvImJ_T0019261.1 MGP_129S1SvImJ_G0015912.1 mouse_genomes_project 1 32941828 32966817 - MGP_129S1SvImJ_P0019261 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0102080.1 MGP_129S1SvImJ_G0039915.1 mouse_genomes_project 1 120394617 120396521 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0000583.1 MGP_129S1SvImJ_G0000522.1 mouse_genomes_project 1 89291672 89294663 + TEC TEC MGP_129S1SvImJ_T0003003.1 MGP_129S1SvImJ_G0002820.1 mouse_genomes_project 1 196764215 196767722 - Gm26574 antisense antisense MGP_129S1SvImJ_T0023675.1 MGP_129S1SvImJ_G0016821.1 mouse_genomes_project 1 180087855 180088794 + MGP_129S1SvImJ_P0023675 Olfr432 protein_coding protein_coding MGP_129S1SvImJ_T0005702.1 MGP_129S1SvImJ_G0004801.1 mouse_genomes_project 1 34498057 34506117 - Gm33222 lincRNA lincRNA MGP_129S1SvImJ_T0005703.1 MGP_129S1SvImJ_G0004801.1 mouse_genomes_project 1 34498140 34506063 - Gm33222 lincRNA lincRNA MGP_129S1SvImJ_T0005872.1 MGP_129S1SvImJ_G0004928.1 mouse_genomes_project 1 99951483 99968949 + Gm29461 lincRNA lincRNA MGP_129S1SvImJ_T0006076.1 MGP_129S1SvImJ_G0005088.1 mouse_genomes_project 1 198533634 198536618 - Gm37432 lincRNA lincRNA MGP_129S1SvImJ_T0099093.1 MGP_129S1SvImJ_G0037160.1 mouse_genomes_project 1 72736581 72736780 + Gm24497 snRNA snRNA MGP_129S1SvImJ_T0018981.1 MGP_129S1SvImJ_G0015850.1 mouse_genomes_project 1 13273506 13315095 + MGP_129S1SvImJ_P0018981 Terf1 protein_coding protein_coding MGP_129S1SvImJ_T0018982.1 MGP_129S1SvImJ_G0015850.1 mouse_genomes_project 1 13273517 13294205 + Terf1 protein_coding processed_transcript MGP_129S1SvImJ_T0018983.1 MGP_129S1SvImJ_G0015850.1 mouse_genomes_project 1 13273524 13313155 + MGP_129S1SvImJ_P0018983 Terf1 protein_coding protein_coding MGP_129S1SvImJ_T0018984.1 MGP_129S1SvImJ_G0015850.1 mouse_genomes_project 1 13275496 13294294 + Terf1 protein_coding retained_intron MGP_129S1SvImJ_T0099138.1 MGP_129S1SvImJ_G0037205.1 mouse_genomes_project 1 177574669 177574776 - Gm22950 snRNA snRNA MGP_129S1SvImJ_T0021013.1 MGP_129S1SvImJ_G0016238.1 mouse_genomes_project 1 87161272 87183899 - MGP_129S1SvImJ_P0021013 Gpr55 protein_coding protein_coding MGP_129S1SvImJ_T0100334.1 MGP_129S1SvImJ_G0038401.1 mouse_genomes_project 1 57993076 57993184 - Gm24548 snoRNA snoRNA MGP_129S1SvImJ_T0024004.1 MGP_129S1SvImJ_G0016896.1 mouse_genomes_project 1 189212551 189260782 + Capn8 protein_coding processed_transcript MGP_129S1SvImJ_T0024005.1 MGP_129S1SvImJ_G0016896.1 mouse_genomes_project 1 189212556 189286506 + MGP_129S1SvImJ_P0024005 Capn8 protein_coding protein_coding MGP_129S1SvImJ_T0024006.1 MGP_129S1SvImJ_G0016896.1 mouse_genomes_project 1 189212582 189286394 + MGP_129S1SvImJ_P0024006 Capn8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024007.1 MGP_129S1SvImJ_G0016896.1 mouse_genomes_project 1 189212605 189258900 + MGP_129S1SvImJ_P0024007 Capn8 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0023768.1 MGP_129S1SvImJ_G0016848.1 mouse_genomes_project 1 183619310 183623191 + MGP_129S1SvImJ_P0023768 Zbtb18 protein_coding protein_coding MGP_129S1SvImJ_T0023769.1 MGP_129S1SvImJ_G0016848.1 mouse_genomes_project 1 183619318 183623240 + MGP_129S1SvImJ_P0023769 Zbtb18 protein_coding protein_coding MGP_129S1SvImJ_T0023770.1 MGP_129S1SvImJ_G0016848.1 mouse_genomes_project 1 183620389 183628098 + MGP_129S1SvImJ_P0023770 Zbtb18 protein_coding protein_coding MGP_129S1SvImJ_T0023771.1 MGP_129S1SvImJ_G0016848.1 mouse_genomes_project 1 183620743 183623883 + MGP_129S1SvImJ_P0023771 Zbtb18 protein_coding protein_coding MGP_129S1SvImJ_T0023772.1 MGP_129S1SvImJ_G0016848.1 mouse_genomes_project 1 183620747 183628098 + MGP_129S1SvImJ_P0023772 Zbtb18 protein_coding protein_coding MGP_129S1SvImJ_T0023773.1 MGP_129S1SvImJ_G0016848.1 mouse_genomes_project 1 183620755 183623681 + MGP_129S1SvImJ_P0023773 Zbtb18 protein_coding protein_coding MGP_129S1SvImJ_T0023774.1 MGP_129S1SvImJ_G0016848.1 mouse_genomes_project 1 183620831 183623613 + MGP_129S1SvImJ_P0023774 Zbtb18 protein_coding protein_coding MGP_129S1SvImJ_T0023775.1 MGP_129S1SvImJ_G0016848.1 mouse_genomes_project 1 183621032 183627555 + MGP_129S1SvImJ_P0023775 Zbtb18 protein_coding protein_coding MGP_129S1SvImJ_T0023776.1 MGP_129S1SvImJ_G0016848.1 mouse_genomes_project 1 183621725 183622600 + Zbtb18 protein_coding processed_transcript MGP_129S1SvImJ_T0023777.1 MGP_129S1SvImJ_G0016848.1 mouse_genomes_project 1 183621915 183628098 + MGP_129S1SvImJ_P0023777 Zbtb18 protein_coding protein_coding MGP_129S1SvImJ_T0020878.1 MGP_129S1SvImJ_G0016211.1 mouse_genomes_project 1 81322514 81594575 - MGP_129S1SvImJ_P0020878 Dock10 protein_coding protein_coding MGP_129S1SvImJ_T0020879.1 MGP_129S1SvImJ_G0016211.1 mouse_genomes_project 1 81322629 81423250 - MGP_129S1SvImJ_P0020879 Dock10 protein_coding protein_coding MGP_129S1SvImJ_T0020880.1 MGP_129S1SvImJ_G0016211.1 mouse_genomes_project 1 81322994 81502817 - MGP_129S1SvImJ_P0020880 Dock10 protein_coding protein_coding MGP_129S1SvImJ_T0020881.1 MGP_129S1SvImJ_G0016211.1 mouse_genomes_project 1 81323082 81353186 - MGP_129S1SvImJ_P0020881 Dock10 protein_coding protein_coding MGP_129S1SvImJ_T0020882.1 MGP_129S1SvImJ_G0016211.1 mouse_genomes_project 1 81323154 81502783 - MGP_129S1SvImJ_P0020882 Dock10 protein_coding protein_coding MGP_129S1SvImJ_T0020883.1 MGP_129S1SvImJ_G0016211.1 mouse_genomes_project 1 81324332 81327758 - Dock10 protein_coding retained_intron MGP_129S1SvImJ_T0020884.1 MGP_129S1SvImJ_G0016211.1 mouse_genomes_project 1 81343859 81345736 - Dock10 protein_coding retained_intron MGP_129S1SvImJ_T0020885.1 MGP_129S1SvImJ_G0016211.1 mouse_genomes_project 1 81411341 81594654 - Dock10 protein_coding retained_intron MGP_129S1SvImJ_T0020886.1 MGP_129S1SvImJ_G0016211.1 mouse_genomes_project 1 81415958 81539985 - MGP_129S1SvImJ_P0020886 Dock10 protein_coding protein_coding MGP_129S1SvImJ_T0020887.1 MGP_129S1SvImJ_G0016211.1 mouse_genomes_project 1 81423017 81502800 - MGP_129S1SvImJ_P0020887 Dock10 protein_coding protein_coding MGP_129S1SvImJ_T0020888.1 MGP_129S1SvImJ_G0016211.1 mouse_genomes_project 1 81481823 81594614 - Dock10 protein_coding retained_intron MGP_129S1SvImJ_T0000793.1 MGP_129S1SvImJ_G0000729.1 mouse_genomes_project 1 188240517 188244330 - TEC TEC MGP_129S1SvImJ_T0019581.1 MGP_129S1SvImJ_G0015974.1 mouse_genomes_project 1 41644665 41653404 + MGP_129S1SvImJ_P0019581 Pou3f3 protein_coding protein_coding MGP_129S1SvImJ_T0000661.1 MGP_129S1SvImJ_G0000599.1 mouse_genomes_project 1 137742329 137745084 - TEC TEC MGP_129S1SvImJ_T0101586.1 MGP_129S1SvImJ_G0039645.1 mouse_genomes_project 1 162442789 162453963 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101587.1 MGP_129S1SvImJ_G0039645.1 mouse_genomes_project 1 162443077 162453960 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101588.1 MGP_129S1SvImJ_G0039645.1 mouse_genomes_project 1 162444170 162444464 + transcribed_processed_pseudogene TEC MGP_129S1SvImJ_T0101589.1 MGP_129S1SvImJ_G0039645.1 mouse_genomes_project 1 162453628 162453879 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0099145.1 MGP_129S1SvImJ_G0037212.1 mouse_genomes_project 1 187296362 187296470 + Gm24836 snRNA snRNA MGP_129S1SvImJ_T0099069.1 MGP_129S1SvImJ_G0037136.1 mouse_genomes_project 1 29923182 29923289 - Gm23032 snRNA snRNA MGP_129S1SvImJ_T0020443.1 MGP_129S1SvImJ_G0016136.1 mouse_genomes_project 1 73364157 73393013 + MGP_129S1SvImJ_P0020443 Igfbp2 protein_coding protein_coding MGP_129S1SvImJ_T0020444.1 MGP_129S1SvImJ_G0016136.1 mouse_genomes_project 1 73389217 73392667 + Igfbp2 protein_coding retained_intron MGP_129S1SvImJ_T0012394.1 MGP_129S1SvImJ_G0010483.1 mouse_genomes_project 1 200139339 200139454 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002880.1 MGP_129S1SvImJ_G0002725.1 mouse_genomes_project 1 95371840 95392634 + Gm10550 antisense antisense MGP_129S1SvImJ_T0005805.1 MGP_129S1SvImJ_G0004872.1 mouse_genomes_project 1 73957999 73985316 + D530049I02Rik lincRNA lincRNA MGP_129S1SvImJ_T0098776.1 MGP_129S1SvImJ_G0036861.1 mouse_genomes_project 1 51376779 51379278 - Gm28323 sense_intronic sense_intronic MGP_129S1SvImJ_T0011955.1 MGP_129S1SvImJ_G0010044.1 mouse_genomes_project 1 25881184 25881838 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100353.1 MGP_129S1SvImJ_G0038420.1 mouse_genomes_project 1 96284642 96284711 - Gm23389 snoRNA snoRNA MGP_129S1SvImJ_T0009479.1 MGP_129S1SvImJ_G0007595.1 mouse_genomes_project 1 11575291 11578603 + miRNA miRNA MGP_129S1SvImJ_T0011925.1 MGP_129S1SvImJ_G0010014.1 mouse_genomes_project 1 14973406 14973892 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000719.1 MGP_129S1SvImJ_G0000656.1 mouse_genomes_project 1 161546205 161551334 + TEC TEC MGP_129S1SvImJ_T0011938.1 MGP_129S1SvImJ_G0010027.1 mouse_genomes_project 1 19057550 19057766 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023003.1 MGP_129S1SvImJ_G0016653.1 mouse_genomes_project 1 166777187 166789331 + MGP_129S1SvImJ_P0023003 Tnfsf18 protein_coding protein_coding MGP_129S1SvImJ_T0000562.1 MGP_129S1SvImJ_G0000501.1 mouse_genomes_project 1 83265848 83268681 + TEC TEC MGP_129S1SvImJ_T0021684.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121080833 121302301 + MGP_129S1SvImJ_P0021684 Clasp1 protein_coding protein_coding MGP_129S1SvImJ_T0021685.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121080833 121302301 + MGP_129S1SvImJ_P0021685 Clasp1 protein_coding protein_coding MGP_129S1SvImJ_T0021686.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121080833 121302301 + MGP_129S1SvImJ_P0021686 Clasp1 protein_coding protein_coding MGP_129S1SvImJ_T0021687.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121080833 121302366 + MGP_129S1SvImJ_P0021687 Clasp1 protein_coding protein_coding MGP_129S1SvImJ_T0021688.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121081119 121196351 + Clasp1 protein_coding retained_intron MGP_129S1SvImJ_T0021689.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121081212 121300052 + MGP_129S1SvImJ_P0021689 Clasp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021690.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121081221 121300469 + MGP_129S1SvImJ_P0021690 Clasp1 protein_coding protein_coding MGP_129S1SvImJ_T0021691.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121081221 121302360 + MGP_129S1SvImJ_P0021691 Clasp1 protein_coding protein_coding MGP_129S1SvImJ_T0021692.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121081221 121300469 + MGP_129S1SvImJ_P0021692 Clasp1 protein_coding protein_coding MGP_129S1SvImJ_T0021693.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121081222 121300626 + MGP_129S1SvImJ_P0021693 Clasp1 protein_coding protein_coding MGP_129S1SvImJ_T0021694.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121081223 121200697 + Clasp1 protein_coding retained_intron MGP_129S1SvImJ_T0021695.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121081239 121300052 + MGP_129S1SvImJ_P0021695 Clasp1 protein_coding protein_coding MGP_129S1SvImJ_T0021696.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121081283 121302109 + MGP_129S1SvImJ_P0021696 Clasp1 protein_coding protein_coding MGP_129S1SvImJ_T0021697.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121112247 121302369 + MGP_129S1SvImJ_P0021697 Clasp1 protein_coding protein_coding MGP_129S1SvImJ_T0021698.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121112411 121307024 + MGP_129S1SvImJ_P0021698 Clasp1 protein_coding protein_coding MGP_129S1SvImJ_T0021699.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121112411 121299999 + MGP_129S1SvImJ_P0021699 Clasp1 protein_coding protein_coding MGP_129S1SvImJ_T0021700.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121154204 121190916 + Clasp1 protein_coding retained_intron MGP_129S1SvImJ_T0021701.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121164321 121299986 + Clasp1 protein_coding processed_transcript MGP_129S1SvImJ_T0021702.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121164376 121197035 + Clasp1 protein_coding processed_transcript MGP_129S1SvImJ_T0021703.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121165137 121194528 + Clasp1 protein_coding processed_transcript MGP_129S1SvImJ_T0021704.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121166322 121198077 + MGP_129S1SvImJ_P0021704 Clasp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021705.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121176577 121300024 + MGP_129S1SvImJ_P0021705 Clasp1 protein_coding protein_coding MGP_129S1SvImJ_T0021706.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121203358 121220074 + Clasp1 protein_coding retained_intron MGP_129S1SvImJ_T0021707.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121205838 121242153 + MGP_129S1SvImJ_P0021707 Clasp1 protein_coding protein_coding MGP_129S1SvImJ_T0021708.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121226297 121302326 + MGP_129S1SvImJ_P0021708 Clasp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021709.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121228984 121231709 + Clasp1 protein_coding retained_intron MGP_129S1SvImJ_T0021710.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121241452 121242172 + Clasp1 protein_coding retained_intron MGP_129S1SvImJ_T0021711.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121242218 121275043 + MGP_129S1SvImJ_P0021711 Clasp1 protein_coding protein_coding MGP_129S1SvImJ_T0021712.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121248446 121250553 + Clasp1 protein_coding retained_intron MGP_129S1SvImJ_T0021713.1 MGP_129S1SvImJ_G0016391.1 mouse_genomes_project 1 121297637 121302301 + Clasp1 protein_coding retained_intron MGP_129S1SvImJ_T0019189.1 MGP_129S1SvImJ_G0015901.1 mouse_genomes_project 1 31808959 32032188 - MGP_129S1SvImJ_P0019189 Prim2 protein_coding protein_coding MGP_129S1SvImJ_T0019190.1 MGP_129S1SvImJ_G0015901.1 mouse_genomes_project 1 31835419 31984778 - Prim2 protein_coding retained_intron MGP_129S1SvImJ_T0019191.1 MGP_129S1SvImJ_G0015901.1 mouse_genomes_project 1 31983514 31985968 - Prim2 protein_coding retained_intron MGP_129S1SvImJ_T0012223.1 MGP_129S1SvImJ_G0010312.1 mouse_genomes_project 1 121526942 121527261 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005963.1 MGP_129S1SvImJ_G0005001.1 mouse_genomes_project 1 158903612 158910551 - Gm28286 lincRNA lincRNA MGP_129S1SvImJ_T0020575.1 MGP_129S1SvImJ_G0016159.1 mouse_genomes_project 1 75269765 75312921 + MGP_129S1SvImJ_P0020575 Ttll4 protein_coding protein_coding MGP_129S1SvImJ_T0020576.1 MGP_129S1SvImJ_G0016159.1 mouse_genomes_project 1 75269770 75293094 + MGP_129S1SvImJ_P0020576 Ttll4 protein_coding protein_coding MGP_129S1SvImJ_T0020577.1 MGP_129S1SvImJ_G0016159.1 mouse_genomes_project 1 75269837 75281273 + Ttll4 protein_coding retained_intron MGP_129S1SvImJ_T0020578.1 MGP_129S1SvImJ_G0016159.1 mouse_genomes_project 1 75269837 75289768 + MGP_129S1SvImJ_P0020578 Ttll4 protein_coding protein_coding MGP_129S1SvImJ_T0020579.1 MGP_129S1SvImJ_G0016159.1 mouse_genomes_project 1 75286874 75307165 + MGP_129S1SvImJ_P0020579 Ttll4 protein_coding protein_coding MGP_129S1SvImJ_T0020580.1 MGP_129S1SvImJ_G0016159.1 mouse_genomes_project 1 75293062 75296365 + Ttll4 protein_coding processed_transcript MGP_129S1SvImJ_T0020581.1 MGP_129S1SvImJ_G0016159.1 mouse_genomes_project 1 75293692 75296387 + Ttll4 protein_coding processed_transcript MGP_129S1SvImJ_T0020582.1 MGP_129S1SvImJ_G0016159.1 mouse_genomes_project 1 75297159 75298415 + Ttll4 protein_coding retained_intron MGP_129S1SvImJ_T0020583.1 MGP_129S1SvImJ_G0016159.1 mouse_genomes_project 1 75297809 75311020 + Ttll4 protein_coding processed_transcript MGP_129S1SvImJ_T0020584.1 MGP_129S1SvImJ_G0016159.1 mouse_genomes_project 1 75304400 75309066 + Ttll4 protein_coding retained_intron MGP_129S1SvImJ_T0020585.1 MGP_129S1SvImJ_G0016159.1 mouse_genomes_project 1 75304921 75307029 + Ttll4 protein_coding processed_transcript MGP_129S1SvImJ_T0000582.1 MGP_129S1SvImJ_G0000521.1 mouse_genomes_project 1 89252252 89253075 + TEC TEC MGP_129S1SvImJ_T0011926.1 MGP_129S1SvImJ_G0010015.1 mouse_genomes_project 1 15518979 15520378 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006059.1 MGP_129S1SvImJ_G0005074.1 mouse_genomes_project 1 192922597 192973553 + Gm37134 lincRNA lincRNA MGP_129S1SvImJ_T0000664.1 MGP_129S1SvImJ_G0000602.1 mouse_genomes_project 1 138528092 138535702 - TEC TEC MGP_129S1SvImJ_T0005797.1 MGP_129S1SvImJ_G0004867.1 mouse_genomes_project 1 72450794 72511917 - 4930556G22Rik lincRNA lincRNA MGP_129S1SvImJ_T0000819.1 MGP_129S1SvImJ_G0000754.1 mouse_genomes_project 1 198652139 198652763 + TEC TEC MGP_129S1SvImJ_T0011949.1 MGP_129S1SvImJ_G0010038.1 mouse_genomes_project 1 22885319 22886139 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000534.1 MGP_129S1SvImJ_G0000473.1 mouse_genomes_project 1 68901030 68903094 - TEC TEC MGP_129S1SvImJ_T0019854.1 MGP_129S1SvImJ_G0016027.1 mouse_genomes_project 1 54331712 54334986 - Ankrd44 protein_coding retained_intron MGP_129S1SvImJ_T0019855.1 MGP_129S1SvImJ_G0016027.1 mouse_genomes_project 1 54331712 54624629 - MGP_129S1SvImJ_P0019855 Ankrd44 protein_coding protein_coding MGP_129S1SvImJ_T0019856.1 MGP_129S1SvImJ_G0016027.1 mouse_genomes_project 1 54331714 54624629 - MGP_129S1SvImJ_P0019856 Ankrd44 protein_coding protein_coding MGP_129S1SvImJ_T0019857.1 MGP_129S1SvImJ_G0016027.1 mouse_genomes_project 1 54335469 54345068 - MGP_129S1SvImJ_P0019857 Ankrd44 protein_coding protein_coding MGP_129S1SvImJ_T0019858.1 MGP_129S1SvImJ_G0016027.1 mouse_genomes_project 1 54338041 54455577 - MGP_129S1SvImJ_P0019858 Ankrd44 protein_coding protein_coding MGP_129S1SvImJ_T0019859.1 MGP_129S1SvImJ_G0016027.1 mouse_genomes_project 1 54341261 54379064 - Ankrd44 protein_coding retained_intron MGP_129S1SvImJ_T0019860.1 MGP_129S1SvImJ_G0016027.1 mouse_genomes_project 1 54354564 54411897 - Ankrd44 protein_coding retained_intron MGP_129S1SvImJ_T0019861.1 MGP_129S1SvImJ_G0016027.1 mouse_genomes_project 1 54411388 54413244 - Ankrd44 protein_coding retained_intron MGP_129S1SvImJ_T0019862.1 MGP_129S1SvImJ_G0016027.1 mouse_genomes_project 1 54418171 54426051 - Ankrd44 protein_coding retained_intron MGP_129S1SvImJ_T0019863.1 MGP_129S1SvImJ_G0016027.1 mouse_genomes_project 1 54425708 54624596 - Ankrd44 protein_coding retained_intron MGP_129S1SvImJ_T0019864.1 MGP_129S1SvImJ_G0016027.1 mouse_genomes_project 1 54433705 54458272 - Ankrd44 protein_coding retained_intron MGP_129S1SvImJ_T0019865.1 MGP_129S1SvImJ_G0016027.1 mouse_genomes_project 1 54452417 54460660 - Ankrd44 protein_coding processed_transcript MGP_129S1SvImJ_T0019866.1 MGP_129S1SvImJ_G0016027.1 mouse_genomes_project 1 54452735 54624629 - Ankrd44 protein_coding retained_intron MGP_129S1SvImJ_T0019867.1 MGP_129S1SvImJ_G0016027.1 mouse_genomes_project 1 54454215 54511375 - Ankrd44 protein_coding processed_transcript MGP_129S1SvImJ_T0019868.1 MGP_129S1SvImJ_G0016027.1 mouse_genomes_project 1 54458640 54584847 - MGP_129S1SvImJ_P0019868 Ankrd44 protein_coding protein_coding MGP_129S1SvImJ_T0022861.1 MGP_129S1SvImJ_G0016631.1 mouse_genomes_project 1 162141165 162443033 - MGP_129S1SvImJ_P0022861 Rasal2 protein_coding protein_coding MGP_129S1SvImJ_T0022862.1 MGP_129S1SvImJ_G0016631.1 mouse_genomes_project 1 162146508 162442372 - MGP_129S1SvImJ_P0022862 Rasal2 protein_coding protein_coding MGP_129S1SvImJ_T0022863.1 MGP_129S1SvImJ_G0016631.1 mouse_genomes_project 1 162184319 162259343 - MGP_129S1SvImJ_P0022863 Rasal2 protein_coding protein_coding MGP_129S1SvImJ_T0022864.1 MGP_129S1SvImJ_G0016631.1 mouse_genomes_project 1 162184512 162272185 - MGP_129S1SvImJ_P0022864 Rasal2 protein_coding protein_coding MGP_129S1SvImJ_T0022865.1 MGP_129S1SvImJ_G0016631.1 mouse_genomes_project 1 162187435 162189778 - Rasal2 protein_coding processed_transcript MGP_129S1SvImJ_T0022866.1 MGP_129S1SvImJ_G0016631.1 mouse_genomes_project 1 162187435 162244738 - MGP_129S1SvImJ_P0022866 Rasal2 protein_coding protein_coding MGP_129S1SvImJ_T0022867.1 MGP_129S1SvImJ_G0016631.1 mouse_genomes_project 1 162308273 162443033 - Rasal2 protein_coding retained_intron MGP_129S1SvImJ_T0012109.1 MGP_129S1SvImJ_G0010198.1 mouse_genomes_project 1 71927138 71927216 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005846.1 MGP_129S1SvImJ_G0004904.1 mouse_genomes_project 1 90742817 90803449 - Gm28342 lincRNA lincRNA MGP_129S1SvImJ_T0021085.1 MGP_129S1SvImJ_G0016254.1 mouse_genomes_project 1 88417218 88420436 - MGP_129S1SvImJ_P0021085 Alppl2 protein_coding protein_coding MGP_129S1SvImJ_T0021086.1 MGP_129S1SvImJ_G0016254.1 mouse_genomes_project 1 88417219 88420453 - MGP_129S1SvImJ_P0021086 Alppl2 protein_coding protein_coding MGP_129S1SvImJ_T0021087.1 MGP_129S1SvImJ_G0016254.1 mouse_genomes_project 1 88419304 88420330 - Alppl2 protein_coding retained_intron MGP_129S1SvImJ_T0000647.1 MGP_129S1SvImJ_G0000586.1 mouse_genomes_project 1 133258966 133261838 + TEC TEC MGP_129S1SvImJ_T0020902.1 MGP_129S1SvImJ_G0016217.1 mouse_genomes_project 1 83499095 83557047 + Col4a3 protein_coding retained_intron MGP_129S1SvImJ_T0020903.1 MGP_129S1SvImJ_G0016217.1 mouse_genomes_project 1 83499150 83643160 + MGP_129S1SvImJ_P0020903 Col4a3 protein_coding protein_coding MGP_129S1SvImJ_T0020904.1 MGP_129S1SvImJ_G0016217.1 mouse_genomes_project 1 83635747 83639416 + MGP_129S1SvImJ_P0020904 Col4a3 protein_coding protein_coding MGP_129S1SvImJ_T0020905.1 MGP_129S1SvImJ_G0016217.1 mouse_genomes_project 1 83635747 83639318 + MGP_129S1SvImJ_P0020905 Col4a3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0100377.1 MGP_129S1SvImJ_G0038444.1 mouse_genomes_project 1 148136388 148136523 + Gm25663 snoRNA snoRNA MGP_129S1SvImJ_T0000607.1 MGP_129S1SvImJ_G0000546.1 mouse_genomes_project 1 108220513 108223824 - TEC TEC MGP_129S1SvImJ_T0012207.1 MGP_129S1SvImJ_G0010296.1 mouse_genomes_project 1 114449336 114455423 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022059.1 MGP_129S1SvImJ_G0016470.1 mouse_genomes_project 1 135791561 135809820 + MGP_129S1SvImJ_P0022059 Nuak2 protein_coding protein_coding MGP_129S1SvImJ_T0022060.1 MGP_129S1SvImJ_G0016470.1 mouse_genomes_project 1 135791561 135810015 + MGP_129S1SvImJ_P0022060 Nuak2 protein_coding protein_coding MGP_129S1SvImJ_T0022061.1 MGP_129S1SvImJ_G0016470.1 mouse_genomes_project 1 135791600 135793172 + Nuak2 protein_coding processed_transcript MGP_129S1SvImJ_T0022062.1 MGP_129S1SvImJ_G0016470.1 mouse_genomes_project 1 135803025 135806985 + Nuak2 protein_coding retained_intron MGP_129S1SvImJ_T0022185.1 MGP_129S1SvImJ_G0016495.1 mouse_genomes_project 1 137541269 137552386 - MGP_129S1SvImJ_P0022185 Prelp protein_coding protein_coding MGP_129S1SvImJ_T0022186.1 MGP_129S1SvImJ_G0016495.1 mouse_genomes_project 1 137543685 137552383 - Prelp protein_coding processed_transcript MGP_129S1SvImJ_T0005875.1 MGP_129S1SvImJ_G0004930.1 mouse_genomes_project 1 103074943 103090383 + Gm20268 lincRNA lincRNA MGP_129S1SvImJ_T0012322.1 MGP_129S1SvImJ_G0010411.1 mouse_genomes_project 1 164576290 164576500 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018904.1 MGP_129S1SvImJ_G0015834.1 mouse_genomes_project 1 7412236 7512074 - MGP_129S1SvImJ_P0018904 Arfgef1 protein_coding protein_coding MGP_129S1SvImJ_T0018905.1 MGP_129S1SvImJ_G0015834.1 mouse_genomes_project 1 7413355 7416367 - Arfgef1 protein_coding retained_intron MGP_129S1SvImJ_T0018906.1 MGP_129S1SvImJ_G0015834.1 mouse_genomes_project 1 7422070 7429196 - Arfgef1 protein_coding retained_intron MGP_129S1SvImJ_T0018907.1 MGP_129S1SvImJ_G0015834.1 mouse_genomes_project 1 7431064 7434726 - Arfgef1 protein_coding retained_intron MGP_129S1SvImJ_T0018908.1 MGP_129S1SvImJ_G0015834.1 mouse_genomes_project 1 7450207 7512074 - MGP_129S1SvImJ_P0018908 Arfgef1 protein_coding protein_coding MGP_129S1SvImJ_T0018909.1 MGP_129S1SvImJ_G0015834.1 mouse_genomes_project 1 7486146 7487308 - Arfgef1 protein_coding retained_intron MGP_129S1SvImJ_T0018910.1 MGP_129S1SvImJ_G0015834.1 mouse_genomes_project 1 7486361 7491450 - Arfgef1 protein_coding retained_intron MGP_129S1SvImJ_T0102100.1 MGP_129S1SvImJ_G0039935.1 mouse_genomes_project 1 180194050 180194993 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0000833.1 MGP_129S1SvImJ_G0000767.1 mouse_genomes_project 1 202223907 202226204 + TEC TEC MGP_129S1SvImJ_T0098420.1 MGP_129S1SvImJ_G0036505.1 mouse_genomes_project 1 91815364 91815471 + Gm27648 rRNA rRNA MGP_129S1SvImJ_T0023112.1 MGP_129S1SvImJ_G0016676.1 mouse_genomes_project 1 169399497 169403973 + MGP_129S1SvImJ_P0023112 Mettl18 protein_coding protein_coding MGP_129S1SvImJ_T0023113.1 MGP_129S1SvImJ_G0016676.1 mouse_genomes_project 1 169399497 169403973 + MGP_129S1SvImJ_P0023113 Mettl18 protein_coding protein_coding MGP_129S1SvImJ_T0002875.1 MGP_129S1SvImJ_G0002720.1 mouse_genomes_project 1 94441713 94449716 - Gm29480 antisense antisense MGP_129S1SvImJ_T0023519.1 MGP_129S1SvImJ_G0016771.1 mouse_genomes_project 1 177676452 177702325 + Cd84 protein_coding processed_transcript MGP_129S1SvImJ_T0023520.1 MGP_129S1SvImJ_G0016771.1 mouse_genomes_project 1 177677294 177691809 + MGP_129S1SvImJ_P0023520 Cd84 protein_coding protein_coding MGP_129S1SvImJ_T0023521.1 MGP_129S1SvImJ_G0016771.1 mouse_genomes_project 1 177677362 177715551 + MGP_129S1SvImJ_P0023521 Cd84 protein_coding protein_coding MGP_129S1SvImJ_T0020360.1 MGP_129S1SvImJ_G0016118.1 mouse_genomes_project 1 67261197 67307765 - MGP_129S1SvImJ_P0020360 Lancl1 protein_coding protein_coding MGP_129S1SvImJ_T0020361.1 MGP_129S1SvImJ_G0016118.1 mouse_genomes_project 1 67261197 67307758 - MGP_129S1SvImJ_P0020361 Lancl1 protein_coding protein_coding MGP_129S1SvImJ_T0020362.1 MGP_129S1SvImJ_G0016118.1 mouse_genomes_project 1 67264100 67307727 - MGP_129S1SvImJ_P0020362 Lancl1 protein_coding protein_coding MGP_129S1SvImJ_T0020363.1 MGP_129S1SvImJ_G0016118.1 mouse_genomes_project 1 67267742 67286821 - Lancl1 protein_coding processed_transcript MGP_129S1SvImJ_T0020364.1 MGP_129S1SvImJ_G0016118.1 mouse_genomes_project 1 67270679 67307727 - MGP_129S1SvImJ_P0020364 Lancl1 protein_coding protein_coding MGP_129S1SvImJ_T0020365.1 MGP_129S1SvImJ_G0016118.1 mouse_genomes_project 1 67285364 67287967 - Lancl1 protein_coding retained_intron MGP_129S1SvImJ_T0023611.1 MGP_129S1SvImJ_G0016790.1 mouse_genomes_project 1 178369254 178378592 + Tagln2 protein_coding retained_intron MGP_129S1SvImJ_T0023612.1 MGP_129S1SvImJ_G0016790.1 mouse_genomes_project 1 178369254 178380036 + MGP_129S1SvImJ_P0023612 Tagln2 protein_coding protein_coding MGP_129S1SvImJ_T0023613.1 MGP_129S1SvImJ_G0016790.1 mouse_genomes_project 1 178369452 178378510 + MGP_129S1SvImJ_P0023613 Tagln2 protein_coding protein_coding MGP_129S1SvImJ_T0023614.1 MGP_129S1SvImJ_G0016790.1 mouse_genomes_project 1 178370476 178379411 + MGP_129S1SvImJ_P0023614 Tagln2 protein_coding protein_coding MGP_129S1SvImJ_T0002993.1 MGP_129S1SvImJ_G0002811.1 mouse_genomes_project 1 192031384 192033002 + 2010103J01Rik antisense antisense MGP_129S1SvImJ_T0002869.1 MGP_129S1SvImJ_G0002714.1 mouse_genomes_project 1 89240530 89241482 - Gm19582 antisense antisense MGP_129S1SvImJ_T0022696.1 MGP_129S1SvImJ_G0016600.1 mouse_genomes_project 1 158584432 158589555 + MGP_129S1SvImJ_P0022696 Rgs16 protein_coding protein_coding MGP_129S1SvImJ_T0101832.1 MGP_129S1SvImJ_G0039786.1 mouse_genomes_project 1 98640503 98735710 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101833.1 MGP_129S1SvImJ_G0039786.1 mouse_genomes_project 1 98657826 98735370 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0023478.1 MGP_129S1SvImJ_G0016759.1 mouse_genomes_project 1 177167372 177188943 + MGP_129S1SvImJ_P0023478 Nectin4 protein_coding protein_coding MGP_129S1SvImJ_T0023479.1 MGP_129S1SvImJ_G0016759.1 mouse_genomes_project 1 177167625 177189254 + MGP_129S1SvImJ_P0023479 Nectin4 protein_coding protein_coding MGP_129S1SvImJ_T0023480.1 MGP_129S1SvImJ_G0016759.1 mouse_genomes_project 1 177167628 177188941 + MGP_129S1SvImJ_P0023480 Nectin4 protein_coding protein_coding MGP_129S1SvImJ_T0012165.1 MGP_129S1SvImJ_G0010254.1 mouse_genomes_project 1 100236695 100238229 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006041.1 MGP_129S1SvImJ_G0005062.1 mouse_genomes_project 1 190549569 190550395 + Gm38108 lincRNA lincRNA MGP_129S1SvImJ_T0100336.1 MGP_129S1SvImJ_G0038403.1 mouse_genomes_project 1 59672026 59672113 + Snord70 snoRNA snoRNA MGP_129S1SvImJ_T0012075.1 MGP_129S1SvImJ_G0010164.1 mouse_genomes_project 1 60980027 60980552 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006063.1 MGP_129S1SvImJ_G0005077.1 mouse_genomes_project 1 193734406 193737586 + 1700023G09Rik lincRNA lincRNA MGP_129S1SvImJ_T0006064.1 MGP_129S1SvImJ_G0005077.1 mouse_genomes_project 1 193734435 193736800 + 1700023G09Rik lincRNA lincRNA MGP_129S1SvImJ_T0000473.1 MGP_129S1SvImJ_G0000412.1 mouse_genomes_project 1 35493423 35496975 - TEC TEC MGP_129S1SvImJ_T0009519.1 MGP_129S1SvImJ_G0007635.1 mouse_genomes_project 1 83043038 83043142 + Mir6344 miRNA miRNA MGP_129S1SvImJ_T0019488.1 MGP_129S1SvImJ_G0015951.1 mouse_genomes_project 1 37474075 37527608 - MGP_129S1SvImJ_P0019488 Lonrf2 protein_coding protein_coding MGP_129S1SvImJ_T0019489.1 MGP_129S1SvImJ_G0015951.1 mouse_genomes_project 1 37474868 37527093 - MGP_129S1SvImJ_P0019489 Lonrf2 protein_coding protein_coding MGP_129S1SvImJ_T0019490.1 MGP_129S1SvImJ_G0015951.1 mouse_genomes_project 1 37526376 37527554 - Lonrf2 protein_coding retained_intron MGP_129S1SvImJ_T0005866.1 MGP_129S1SvImJ_G0004923.1 mouse_genomes_project 1 97413533 97430375 - 4930598F16Rik lincRNA lincRNA MGP_129S1SvImJ_T0012218.1 MGP_129S1SvImJ_G0010307.1 mouse_genomes_project 1 120217176 120217650 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000436.1 MGP_129S1SvImJ_G0000376.1 mouse_genomes_project 1 23235073 23238179 - TEC TEC MGP_129S1SvImJ_T0011896.1 MGP_129S1SvImJ_G0009985.1 mouse_genomes_project 1 5705808 5706208 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021799.1 MGP_129S1SvImJ_G0016413.1 mouse_genomes_project 1 126277449 127053062 - MGP_129S1SvImJ_P0021799 Dpp10 protein_coding protein_coding MGP_129S1SvImJ_T0021800.1 MGP_129S1SvImJ_G0016413.1 mouse_genomes_project 1 126288166 127052665 - MGP_129S1SvImJ_P0021800 Dpp10 protein_coding protein_coding MGP_129S1SvImJ_T0021801.1 MGP_129S1SvImJ_G0016413.1 mouse_genomes_project 1 126588289 126643256 - Dpp10 protein_coding processed_transcript MGP_129S1SvImJ_T0021802.1 MGP_129S1SvImJ_G0016413.1 mouse_genomes_project 1 126611134 127052757 - Dpp10 protein_coding processed_transcript MGP_129S1SvImJ_T0099066.1 MGP_129S1SvImJ_G0037133.1 mouse_genomes_project 1 18060840 18060942 - Gm24162 snRNA snRNA MGP_129S1SvImJ_T0002823.1 MGP_129S1SvImJ_G0002681.1 mouse_genomes_project 1 52727032 52728615 + Gm28777 antisense antisense MGP_129S1SvImJ_T0022475.1 MGP_129S1SvImJ_G0016558.1 mouse_genomes_project 1 143932014 144154397 - MGP_129S1SvImJ_P0022475 Cfhr2 protein_coding protein_coding MGP_129S1SvImJ_T0022476.1 MGP_129S1SvImJ_G0016558.1 mouse_genomes_project 1 143937888 144154409 - MGP_129S1SvImJ_P0022476 Cfhr2 protein_coding protein_coding MGP_129S1SvImJ_T0009570.1 MGP_129S1SvImJ_G0007686.1 mouse_genomes_project 1 184652071 184652192 - Gm27458 miRNA miRNA MGP_129S1SvImJ_T0023467.1 MGP_129S1SvImJ_G0016756.1 mouse_genomes_project 1 177132215 177139764 - Nit1 protein_coding retained_intron MGP_129S1SvImJ_T0023468.1 MGP_129S1SvImJ_G0016756.1 mouse_genomes_project 1 177132215 177139911 - MGP_129S1SvImJ_P0023468 Nit1 protein_coding protein_coding MGP_129S1SvImJ_T0023469.1 MGP_129S1SvImJ_G0016756.1 mouse_genomes_project 1 177134774 177139929 - MGP_129S1SvImJ_P0023469 Nit1 protein_coding protein_coding MGP_129S1SvImJ_T0023470.1 MGP_129S1SvImJ_G0016756.1 mouse_genomes_project 1 177135532 177139923 - Nit1 protein_coding retained_intron MGP_129S1SvImJ_T0023471.1 MGP_129S1SvImJ_G0016756.1 mouse_genomes_project 1 177136443 177139928 - MGP_129S1SvImJ_P0023471 Nit1 protein_coding protein_coding MGP_129S1SvImJ_T0023472.1 MGP_129S1SvImJ_G0016756.1 mouse_genomes_project 1 177137976 177139908 - MGP_129S1SvImJ_P0023472 Nit1 protein_coding protein_coding MGP_129S1SvImJ_T0023473.1 MGP_129S1SvImJ_G0016756.1 mouse_genomes_project 1 177138031 177138747 - Nit1 protein_coding retained_intron MGP_129S1SvImJ_T0023474.1 MGP_129S1SvImJ_G0016756.1 mouse_genomes_project 1 177138354 177139928 - MGP_129S1SvImJ_P0023474 Nit1 protein_coding protein_coding MGP_129S1SvImJ_T0000768.1 MGP_129S1SvImJ_G0000705.1 mouse_genomes_project 1 181467536 181469346 - TEC TEC MGP_129S1SvImJ_T0102055.1 MGP_129S1SvImJ_G0039890.1 mouse_genomes_project 1 65646293 65646461 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0005812.1 MGP_129S1SvImJ_G0004876.1 mouse_genomes_project 1 74311319 74414750 - Gm29183 lincRNA lincRNA MGP_129S1SvImJ_T0102062.1 MGP_129S1SvImJ_G0039897.1 mouse_genomes_project 1 89554392 89554643 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0024119.1 MGP_129S1SvImJ_G0016923.1 mouse_genomes_project 1 194018753 194042263 + Gpatch2 protein_coding processed_transcript MGP_129S1SvImJ_T0024120.1 MGP_129S1SvImJ_G0016923.1 mouse_genomes_project 1 194018756 194164412 + MGP_129S1SvImJ_P0024120 Gpatch2 protein_coding protein_coding MGP_129S1SvImJ_T0024121.1 MGP_129S1SvImJ_G0016923.1 mouse_genomes_project 1 194018756 194162625 + MGP_129S1SvImJ_P0024121 Gpatch2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024122.1 MGP_129S1SvImJ_G0016923.1 mouse_genomes_project 1 194018767 194164689 + MGP_129S1SvImJ_P0024122 Gpatch2 protein_coding protein_coding MGP_129S1SvImJ_T0024123.1 MGP_129S1SvImJ_G0016923.1 mouse_genomes_project 1 194018783 194112655 + Gpatch2 protein_coding retained_intron MGP_129S1SvImJ_T0024124.1 MGP_129S1SvImJ_G0016923.1 mouse_genomes_project 1 194018789 194040849 + MGP_129S1SvImJ_P0024124 Gpatch2 protein_coding protein_coding MGP_129S1SvImJ_T0024125.1 MGP_129S1SvImJ_G0016923.1 mouse_genomes_project 1 194018791 194040333 + MGP_129S1SvImJ_P0024125 Gpatch2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024126.1 MGP_129S1SvImJ_G0016923.1 mouse_genomes_project 1 194018869 194041171 + MGP_129S1SvImJ_P0024126 Gpatch2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0024127.1 MGP_129S1SvImJ_G0016923.1 mouse_genomes_project 1 194018988 194163708 + MGP_129S1SvImJ_P0024127 Gpatch2 protein_coding protein_coding MGP_129S1SvImJ_T0024128.1 MGP_129S1SvImJ_G0016923.1 mouse_genomes_project 1 194032603 194164412 + MGP_129S1SvImJ_P0024128 Gpatch2 protein_coding protein_coding MGP_129S1SvImJ_T0012020.1 MGP_129S1SvImJ_G0010109.1 mouse_genomes_project 1 44990289 44991465 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022278.1 MGP_129S1SvImJ_G0016518.1 mouse_genomes_project 1 138901488 138908933 - MGP_129S1SvImJ_P0022278 Gpr37l1 protein_coding protein_coding MGP_129S1SvImJ_T0100342.1 MGP_129S1SvImJ_G0038409.1 mouse_genomes_project 1 63321419 63321454 + Gm26457 snoRNA snoRNA MGP_129S1SvImJ_T0000391.1 MGP_129S1SvImJ_G0000333.1 mouse_genomes_project 1 5688335 5690869 - TEC TEC MGP_129S1SvImJ_T0021038.1 MGP_129S1SvImJ_G0016243.1 mouse_genomes_project 1 87372479 87404261 + MGP_129S1SvImJ_P0021038 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0000388.1 MGP_129S1SvImJ_G0000330.1 mouse_genomes_project 1 3017282 3019075 - TEC TEC MGP_129S1SvImJ_T0012383.1 MGP_129S1SvImJ_G0010472.1 mouse_genomes_project 1 196176692 196177073 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009501.1 MGP_129S1SvImJ_G0007617.1 mouse_genomes_project 1 54462074 54462179 + Gm24053 miRNA miRNA MGP_129S1SvImJ_T0000474.1 MGP_129S1SvImJ_G0000413.1 mouse_genomes_project 1 35909993 35910339 - TEC TEC MGP_129S1SvImJ_T0012017.1 MGP_129S1SvImJ_G0010106.1 mouse_genomes_project 1 44660939 44661678 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009542.1 MGP_129S1SvImJ_G0007658.1 mouse_genomes_project 1 135665835 135665932 + Mir135b miRNA miRNA MGP_129S1SvImJ_T0012015.1 MGP_129S1SvImJ_G0010104.1 mouse_genomes_project 1 44566310 44566834 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022279.1 MGP_129S1SvImJ_G0016519.1 mouse_genomes_project 1 139007925 139012923 - MGP_129S1SvImJ_P0022279 Elf3 protein_coding protein_coding MGP_129S1SvImJ_T0022280.1 MGP_129S1SvImJ_G0016519.1 mouse_genomes_project 1 139007929 139012793 - MGP_129S1SvImJ_P0022280 Elf3 protein_coding protein_coding MGP_129S1SvImJ_T0022281.1 MGP_129S1SvImJ_G0016519.1 mouse_genomes_project 1 139011020 139012013 - Elf3 protein_coding retained_intron MGP_129S1SvImJ_T0009581.1 MGP_129S1SvImJ_G0007697.1 mouse_genomes_project 1 202219071 202219159 + Mir29c miRNA miRNA MGP_129S1SvImJ_T0019282.1 MGP_129S1SvImJ_G0015917.1 mouse_genomes_project 1 34566708 34606731 + MGP_129S1SvImJ_P0019282 Hs6st1 protein_coding protein_coding MGP_129S1SvImJ_T0019283.1 MGP_129S1SvImJ_G0015917.1 mouse_genomes_project 1 34601974 34605265 + Hs6st1 protein_coding retained_intron MGP_129S1SvImJ_T0021957.1 MGP_129S1SvImJ_G0016448.1 mouse_genomes_project 1 134461460 134511229 - MGP_129S1SvImJ_P0021957 Mapkapk2 protein_coding protein_coding MGP_129S1SvImJ_T0021958.1 MGP_129S1SvImJ_G0016448.1 mouse_genomes_project 1 134464631 134484692 - MGP_129S1SvImJ_P0021958 Mapkapk2 protein_coding protein_coding MGP_129S1SvImJ_T0017043.1 MGP_129S1SvImJ_G0015107.1 mouse_genomes_project 1 91101926 91139751 - 4933400F21Rik processed_transcript antisense MGP_129S1SvImJ_T0017044.1 MGP_129S1SvImJ_G0015107.1 mouse_genomes_project 1 91131896 91139737 - 4933400F21Rik processed_transcript antisense MGP_129S1SvImJ_T0017045.1 MGP_129S1SvImJ_G0015107.1 mouse_genomes_project 1 91135494 91139731 - 4933400F21Rik processed_transcript retained_intron MGP_129S1SvImJ_T0006012.1 MGP_129S1SvImJ_G0005039.1 mouse_genomes_project 1 177111331 177116884 - Gm20045 lincRNA lincRNA MGP_129S1SvImJ_T0005904.1 MGP_129S1SvImJ_G0004953.1 mouse_genomes_project 1 123677757 123679092 + Gm29347 lincRNA lincRNA MGP_129S1SvImJ_T0012111.1 MGP_129S1SvImJ_G0010200.1 mouse_genomes_project 1 72154979 72155856 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000381.1 MGP_129S1SvImJ_G0000323.1 mouse_genomes_project 1 676829 678463 + TEC TEC MGP_129S1SvImJ_T0022587.1 MGP_129S1SvImJ_G0016580.1 mouse_genomes_project 1 156091944 156156543 - MGP_129S1SvImJ_P0022587 Swt1 protein_coding protein_coding MGP_129S1SvImJ_T0022588.1 MGP_129S1SvImJ_G0016580.1 mouse_genomes_project 1 156092607 156156524 - MGP_129S1SvImJ_P0022588 Swt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022589.1 MGP_129S1SvImJ_G0016580.1 mouse_genomes_project 1 156094652 156096602 - Swt1 protein_coding retained_intron MGP_129S1SvImJ_T0022590.1 MGP_129S1SvImJ_G0016580.1 mouse_genomes_project 1 156103480 156108595 - Swt1 protein_coding retained_intron MGP_129S1SvImJ_T0022591.1 MGP_129S1SvImJ_G0016580.1 mouse_genomes_project 1 156116938 156129540 - MGP_129S1SvImJ_P0022591 Swt1 protein_coding protein_coding MGP_129S1SvImJ_T0022592.1 MGP_129S1SvImJ_G0016580.1 mouse_genomes_project 1 156127669 156151707 - MGP_129S1SvImJ_P0022592 Swt1 protein_coding protein_coding MGP_129S1SvImJ_T0022593.1 MGP_129S1SvImJ_G0016580.1 mouse_genomes_project 1 156128304 156131141 - Swt1 protein_coding retained_intron MGP_129S1SvImJ_T0022594.1 MGP_129S1SvImJ_G0016580.1 mouse_genomes_project 1 156139447 156141269 - Swt1 protein_coding retained_intron MGP_129S1SvImJ_T0022595.1 MGP_129S1SvImJ_G0016580.1 mouse_genomes_project 1 156144599 156151492 - Swt1 protein_coding retained_intron MGP_129S1SvImJ_T0022596.1 MGP_129S1SvImJ_G0016580.1 mouse_genomes_project 1 156155111 156156543 - Swt1 protein_coding retained_intron MGP_129S1SvImJ_T0100356.1 MGP_129S1SvImJ_G0038423.1 mouse_genomes_project 1 102132523 102132655 - Gm23602 snoRNA snoRNA MGP_129S1SvImJ_T0005878.1 MGP_129S1SvImJ_G0004933.1 mouse_genomes_project 1 108120747 108131674 - Gm7160 lincRNA lincRNA MGP_129S1SvImJ_T0005879.1 MGP_129S1SvImJ_G0004933.1 mouse_genomes_project 1 108130626 108131644 - Gm7160 lincRNA lincRNA MGP_129S1SvImJ_T0023353.1 MGP_129S1SvImJ_G0016736.1 mouse_genomes_project 1 176656831 176664109 - MGP_129S1SvImJ_P0023353 Fcrlb protein_coding protein_coding MGP_129S1SvImJ_T0000585.1 MGP_129S1SvImJ_G0000524.1 mouse_genomes_project 1 90932257 90934636 + TEC TEC MGP_129S1SvImJ_T0020283.1 MGP_129S1SvImJ_G0016105.1 mouse_genomes_project 1 65299727 65302101 - Cryga protein_coding retained_intron MGP_129S1SvImJ_T0020284.1 MGP_129S1SvImJ_G0016105.1 mouse_genomes_project 1 65299727 65302114 - MGP_129S1SvImJ_P0020284 Cryga protein_coding protein_coding MGP_129S1SvImJ_T0020847.1 MGP_129S1SvImJ_G0016203.1 mouse_genomes_project 1 79578304 79581588 + MGP_129S1SvImJ_P0020847 Kcne4 protein_coding protein_coding MGP_129S1SvImJ_T0020848.1 MGP_129S1SvImJ_G0016203.1 mouse_genomes_project 1 79578473 79581588 + MGP_129S1SvImJ_P0020848 Kcne4 protein_coding protein_coding MGP_129S1SvImJ_T0005809.1 MGP_129S1SvImJ_G0004874.1 mouse_genomes_project 1 74085895 74093318 + Gm29186 lincRNA lincRNA MGP_129S1SvImJ_T0012044.1 MGP_129S1SvImJ_G0010133.1 mouse_genomes_project 1 52014677 52015760 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017030.1 MGP_129S1SvImJ_G0015101.1 mouse_genomes_project 1 64858010 64868701 - 2810408I11Rik processed_transcript antisense MGP_129S1SvImJ_T0017031.1 MGP_129S1SvImJ_G0015101.1 mouse_genomes_project 1 64861413 64868650 - 2810408I11Rik processed_transcript antisense MGP_129S1SvImJ_T0017032.1 MGP_129S1SvImJ_G0015101.1 mouse_genomes_project 1 64867165 64868670 - 2810408I11Rik processed_transcript retained_intron MGP_129S1SvImJ_T0023281.1 MGP_129S1SvImJ_G0016714.1 mouse_genomes_project 1 172936368 172961758 - MGP_129S1SvImJ_P0023281 Mgst3 protein_coding protein_coding MGP_129S1SvImJ_T0102077.1 MGP_129S1SvImJ_G0039912.1 mouse_genomes_project 1 109221041 109226238 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099081.1 MGP_129S1SvImJ_G0037148.1 mouse_genomes_project 1 53931945 53932052 - Gm25829 snRNA snRNA MGP_129S1SvImJ_T0098425.1 MGP_129S1SvImJ_G0036510.1 mouse_genomes_project 1 142913982 142914098 - n-R5s217 rRNA rRNA MGP_129S1SvImJ_T0023697.1 MGP_129S1SvImJ_G0016834.1 mouse_genomes_project 1 180914750 181012007 - MGP_129S1SvImJ_P0023697 Grem2 protein_coding protein_coding MGP_129S1SvImJ_T0005662.1 MGP_129S1SvImJ_G0004769.1 mouse_genomes_project 1 4619003 4653233 - lincRNA lincRNA MGP_129S1SvImJ_T0005663.1 MGP_129S1SvImJ_G0004769.1 mouse_genomes_project 1 4619005 4653307 - lincRNA lincRNA MGP_129S1SvImJ_T0005664.1 MGP_129S1SvImJ_G0004769.1 mouse_genomes_project 1 4623955 4626641 - lincRNA retained_intron MGP_129S1SvImJ_T0022058.1 MGP_129S1SvImJ_G0016469.1 mouse_genomes_project 1 135774276 135782996 + MGP_129S1SvImJ_P0022058 Klhdc8a protein_coding protein_coding MGP_129S1SvImJ_T0000800.1 MGP_129S1SvImJ_G0000735.1 mouse_genomes_project 1 189127072 189131214 + TEC TEC MGP_129S1SvImJ_T0021972.1 MGP_129S1SvImJ_G0016452.1 mouse_genomes_project 1 134677592 134688346 - Ikbke protein_coding retained_intron MGP_129S1SvImJ_T0021973.1 MGP_129S1SvImJ_G0016452.1 mouse_genomes_project 1 134677846 134703243 - MGP_129S1SvImJ_P0021973 Ikbke protein_coding protein_coding MGP_129S1SvImJ_T0021974.1 MGP_129S1SvImJ_G0016452.1 mouse_genomes_project 1 134677851 134700595 - MGP_129S1SvImJ_P0021974 Ikbke protein_coding protein_coding MGP_129S1SvImJ_T0021975.1 MGP_129S1SvImJ_G0016452.1 mouse_genomes_project 1 134682269 134689546 - Ikbke protein_coding retained_intron MGP_129S1SvImJ_T0021976.1 MGP_129S1SvImJ_G0016452.1 mouse_genomes_project 1 134686575 134693800 - Ikbke protein_coding retained_intron MGP_129S1SvImJ_T0021977.1 MGP_129S1SvImJ_G0016452.1 mouse_genomes_project 1 134694156 134695798 - Ikbke protein_coding retained_intron MGP_129S1SvImJ_T0021978.1 MGP_129S1SvImJ_G0016452.1 mouse_genomes_project 1 134697047 134700357 - MGP_129S1SvImJ_P0021978 Ikbke protein_coding protein_coding MGP_129S1SvImJ_T0018877.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7303936 7305292 + Cspp1 protein_coding retained_intron MGP_129S1SvImJ_T0018878.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7303955 7313483 + MGP_129S1SvImJ_P0018878 Cspp1 protein_coding protein_coding MGP_129S1SvImJ_T0018879.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7304166 7411434 + MGP_129S1SvImJ_P0018879 Cspp1 protein_coding protein_coding MGP_129S1SvImJ_T0018880.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7304175 7328764 + Cspp1 protein_coding retained_intron MGP_129S1SvImJ_T0018881.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7304198 7326041 + Cspp1 protein_coding retained_intron MGP_129S1SvImJ_T0018882.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7304211 7334194 + MGP_129S1SvImJ_P0018882 Cspp1 protein_coding protein_coding MGP_129S1SvImJ_T0018883.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7305716 7325865 + Cspp1 protein_coding retained_intron MGP_129S1SvImJ_T0018884.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7305722 7335036 + MGP_129S1SvImJ_P0018884 Cspp1 protein_coding protein_coding MGP_129S1SvImJ_T0018885.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7305722 7335393 + MGP_129S1SvImJ_P0018885 Cspp1 protein_coding protein_coding MGP_129S1SvImJ_T0018886.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7305726 7325851 + Cspp1 protein_coding retained_intron MGP_129S1SvImJ_T0018887.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7305734 7334178 + MGP_129S1SvImJ_P0018887 Cspp1 protein_coding protein_coding MGP_129S1SvImJ_T0018888.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7305772 7326984 + Cspp1 protein_coding retained_intron MGP_129S1SvImJ_T0018889.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7306104 7325816 + MGP_129S1SvImJ_P0018889 Cspp1 protein_coding protein_coding MGP_129S1SvImJ_T0018890.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7312441 7410811 + MGP_129S1SvImJ_P0018890 Cspp1 protein_coding protein_coding MGP_129S1SvImJ_T0018891.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7323916 7333651 + MGP_129S1SvImJ_P0018891 Cspp1 protein_coding protein_coding MGP_129S1SvImJ_T0018892.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7339216 7344225 + Cspp1 protein_coding retained_intron MGP_129S1SvImJ_T0018893.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7342415 7356664 + Cspp1 protein_coding retained_intron MGP_129S1SvImJ_T0018894.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7342893 7353999 + Cspp1 protein_coding retained_intron MGP_129S1SvImJ_T0018895.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7342946 7361102 + MGP_129S1SvImJ_P0018895 Cspp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018896.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7358593 7361164 + Cspp1 protein_coding retained_intron MGP_129S1SvImJ_T0018897.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7366683 7380671 + Cspp1 protein_coding retained_intron MGP_129S1SvImJ_T0018898.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7376345 7380660 + Cspp1 protein_coding retained_intron MGP_129S1SvImJ_T0018899.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7384897 7407970 + MGP_129S1SvImJ_P0018899 Cspp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018900.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7387446 7388733 + Cspp1 protein_coding retained_intron MGP_129S1SvImJ_T0018901.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7398186 7403815 + Cspp1 protein_coding retained_intron MGP_129S1SvImJ_T0018902.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7403755 7407258 + Cspp1 protein_coding retained_intron MGP_129S1SvImJ_T0018903.1 MGP_129S1SvImJ_G0015833.1 mouse_genomes_project 1 7407766 7410988 + Cspp1 protein_coding retained_intron MGP_129S1SvImJ_T0021494.1 MGP_129S1SvImJ_G0016344.1 mouse_genomes_project 1 95138917 95258966 + MGP_129S1SvImJ_P0021494 Farp2 protein_coding protein_coding MGP_129S1SvImJ_T0021495.1 MGP_129S1SvImJ_G0016344.1 mouse_genomes_project 1 95138950 95212756 + MGP_129S1SvImJ_P0021495 Farp2 protein_coding protein_coding MGP_129S1SvImJ_T0021496.1 MGP_129S1SvImJ_G0016344.1 mouse_genomes_project 1 95230920 95258361 + MGP_129S1SvImJ_P0021496 Farp2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0000491.1 MGP_129S1SvImJ_G0000430.1 mouse_genomes_project 1 46200917 46204769 - TEC TEC MGP_129S1SvImJ_T0002816.1 MGP_129S1SvImJ_G0002675.1 mouse_genomes_project 1 42018337 42019206 + Gm28782 antisense antisense MGP_129S1SvImJ_T0020853.1 MGP_129S1SvImJ_G0016206.1 mouse_genomes_project 1 80504299 80562990 - MGP_129S1SvImJ_P0020853 Wdfy1 protein_coding protein_coding MGP_129S1SvImJ_T0020854.1 MGP_129S1SvImJ_G0016206.1 mouse_genomes_project 1 80507404 80562959 - MGP_129S1SvImJ_P0020854 Wdfy1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020855.1 MGP_129S1SvImJ_G0016206.1 mouse_genomes_project 1 80519910 80577988 - MGP_129S1SvImJ_P0020855 Wdfy1 protein_coding protein_coding MGP_129S1SvImJ_T0020856.1 MGP_129S1SvImJ_G0016206.1 mouse_genomes_project 1 80522656 80562990 - MGP_129S1SvImJ_P0020856 Wdfy1 protein_coding protein_coding MGP_129S1SvImJ_T0020857.1 MGP_129S1SvImJ_G0016206.1 mouse_genomes_project 1 80522669 80562990 - MGP_129S1SvImJ_P0020857 Wdfy1 protein_coding protein_coding MGP_129S1SvImJ_T0020858.1 MGP_129S1SvImJ_G0016206.1 mouse_genomes_project 1 80522858 80526352 - Wdfy1 protein_coding processed_transcript MGP_129S1SvImJ_T0020859.1 MGP_129S1SvImJ_G0016206.1 mouse_genomes_project 1 80530840 80562942 - Wdfy1 protein_coding retained_intron MGP_129S1SvImJ_T0020860.1 MGP_129S1SvImJ_G0016206.1 mouse_genomes_project 1 80531073 80563262 - MGP_129S1SvImJ_P0020860 Wdfy1 protein_coding protein_coding MGP_129S1SvImJ_T0000580.1 MGP_129S1SvImJ_G0000519.1 mouse_genomes_project 1 88250042 88253200 + TEC TEC MGP_129S1SvImJ_T0005918.1 MGP_129S1SvImJ_G0004963.1 mouse_genomes_project 1 133809337 133820741 - lincRNA lincRNA MGP_129S1SvImJ_T0011880.1 MGP_129S1SvImJ_G0009969.1 mouse_genomes_project 1 3239388 3240471 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019157.1 MGP_129S1SvImJ_G0015893.1 mouse_genomes_project 1 24607457 24615883 - MGP_129S1SvImJ_P0019157 4931408C20Rik protein_coding protein_coding MGP_129S1SvImJ_T0005832.1 MGP_129S1SvImJ_G0004892.1 mouse_genomes_project 1 84673205 84922129 - 4933436I20Rik lincRNA lincRNA MGP_129S1SvImJ_T0005833.1 MGP_129S1SvImJ_G0004892.1 mouse_genomes_project 1 84852490 84922170 - 4933436I20Rik lincRNA lincRNA MGP_129S1SvImJ_T0019915.1 MGP_129S1SvImJ_G0016039.1 mouse_genomes_project 1 57187459 57201615 + MGP_129S1SvImJ_P0019915 1700066M21Rik protein_coding protein_coding MGP_129S1SvImJ_T0019916.1 MGP_129S1SvImJ_G0016039.1 mouse_genomes_project 1 57187472 57195784 + 1700066M21Rik protein_coding processed_transcript MGP_129S1SvImJ_T0019917.1 MGP_129S1SvImJ_G0016039.1 mouse_genomes_project 1 57187479 57195700 + 1700066M21Rik protein_coding processed_transcript MGP_129S1SvImJ_T0012063.1 MGP_129S1SvImJ_G0010152.1 mouse_genomes_project 1 58522590 58529510 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019077.1 MGP_129S1SvImJ_G0015873.1 mouse_genomes_project 1 18519268 18568437 + MGP_129S1SvImJ_P0019077 Paqr8 protein_coding protein_coding MGP_129S1SvImJ_T0019078.1 MGP_129S1SvImJ_G0015873.1 mouse_genomes_project 1 18546683 18567838 + MGP_129S1SvImJ_P0019078 Paqr8 protein_coding protein_coding MGP_129S1SvImJ_T0019079.1 MGP_129S1SvImJ_G0015873.1 mouse_genomes_project 1 18546717 18564539 + MGP_129S1SvImJ_P0019079 Paqr8 protein_coding protein_coding MGP_129S1SvImJ_T0019080.1 MGP_129S1SvImJ_G0015873.1 mouse_genomes_project 1 18551021 18564546 + MGP_129S1SvImJ_P0019080 Paqr8 protein_coding protein_coding MGP_129S1SvImJ_T0020035.1 MGP_129S1SvImJ_G0016059.1 mouse_genomes_project 1 58847268 58915926 - MGP_129S1SvImJ_P0020035 Trak2 protein_coding protein_coding MGP_129S1SvImJ_T0020036.1 MGP_129S1SvImJ_G0016059.1 mouse_genomes_project 1 58850331 58887791 - MGP_129S1SvImJ_P0020036 Trak2 protein_coding protein_coding MGP_129S1SvImJ_T0020037.1 MGP_129S1SvImJ_G0016059.1 mouse_genomes_project 1 58850499 58857208 - Trak2 protein_coding retained_intron MGP_129S1SvImJ_T0020038.1 MGP_129S1SvImJ_G0016059.1 mouse_genomes_project 1 58869934 58871736 - Trak2 protein_coding processed_transcript MGP_129S1SvImJ_T0020039.1 MGP_129S1SvImJ_G0016059.1 mouse_genomes_project 1 58875944 58915925 - MGP_129S1SvImJ_P0020039 Trak2 protein_coding protein_coding MGP_129S1SvImJ_T0020040.1 MGP_129S1SvImJ_G0016059.1 mouse_genomes_project 1 58887355 58915926 - Trak2 protein_coding retained_intron MGP_129S1SvImJ_T0012397.1 MGP_129S1SvImJ_G0010486.1 mouse_genomes_project 1 201983339 201983697 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000650.1 MGP_129S1SvImJ_G0000589.1 mouse_genomes_project 1 134122995 134124675 - TEC TEC MGP_129S1SvImJ_T0099111.1 MGP_129S1SvImJ_G0037178.1 mouse_genomes_project 1 127541342 127541446 + Gm25578 snRNA snRNA MGP_129S1SvImJ_T0005868.1 MGP_129S1SvImJ_G0004925.1 mouse_genomes_project 1 98264815 98279982 - Gm29601 lincRNA lincRNA MGP_129S1SvImJ_T0098413.1 MGP_129S1SvImJ_G0036498.1 mouse_genomes_project 1 35584131 35584250 + n-R5s210 rRNA rRNA MGP_129S1SvImJ_T0024345.1 MGP_129S1SvImJ_G0016963.1 mouse_genomes_project 1 200368214 200369271 - MGP_129S1SvImJ_P0024345 G0s2 protein_coding protein_coding MGP_129S1SvImJ_T0000471.1 MGP_129S1SvImJ_G0000410.1 mouse_genomes_project 1 35005823 35007982 + TEC TEC MGP_129S1SvImJ_T0021238.1 MGP_129S1SvImJ_G0016291.1 mouse_genomes_project 1 91393527 91396751 - MGP_129S1SvImJ_P0021238 Gbx2 protein_coding protein_coding MGP_129S1SvImJ_T0021239.1 MGP_129S1SvImJ_G0016291.1 mouse_genomes_project 1 91393537 91394757 - Gbx2 protein_coding retained_intron MGP_129S1SvImJ_T0021343.1 MGP_129S1SvImJ_G0016311.1 mouse_genomes_project 1 93029896 93066744 + MGP_129S1SvImJ_P0021343 Traf3ip1 protein_coding protein_coding MGP_129S1SvImJ_T0021344.1 MGP_129S1SvImJ_G0016311.1 mouse_genomes_project 1 93029943 93068105 + MGP_129S1SvImJ_P0021344 Traf3ip1 protein_coding protein_coding MGP_129S1SvImJ_T0021345.1 MGP_129S1SvImJ_G0016311.1 mouse_genomes_project 1 93055951 93068105 + Traf3ip1 protein_coding retained_intron MGP_129S1SvImJ_T0002935.1 MGP_129S1SvImJ_G0002763.1 mouse_genomes_project 1 158534469 158536759 - Gm29529 antisense antisense MGP_129S1SvImJ_T0022390.1 MGP_129S1SvImJ_G0016540.1 mouse_genomes_project 1 140084837 140176388 - MGP_129S1SvImJ_P0022390 Camsap2 protein_coding protein_coding MGP_129S1SvImJ_T0022391.1 MGP_129S1SvImJ_G0016540.1 mouse_genomes_project 1 140084966 140098444 - MGP_129S1SvImJ_P0022391 Camsap2 protein_coding protein_coding MGP_129S1SvImJ_T0022392.1 MGP_129S1SvImJ_G0016540.1 mouse_genomes_project 1 140085875 140175982 - MGP_129S1SvImJ_P0022392 Camsap2 protein_coding protein_coding MGP_129S1SvImJ_T0022393.1 MGP_129S1SvImJ_G0016540.1 mouse_genomes_project 1 140087321 140175982 - MGP_129S1SvImJ_P0022393 Camsap2 protein_coding protein_coding MGP_129S1SvImJ_T0022394.1 MGP_129S1SvImJ_G0016540.1 mouse_genomes_project 1 140110978 140115997 - Camsap2 protein_coding processed_transcript MGP_129S1SvImJ_T0022395.1 MGP_129S1SvImJ_G0016540.1 mouse_genomes_project 1 140163397 140176374 - Camsap2 protein_coding processed_transcript MGP_129S1SvImJ_T0020269.1 MGP_129S1SvImJ_G0016100.1 mouse_genomes_project 1 65198722 65222935 - MGP_129S1SvImJ_P0020269 Akr1cl protein_coding protein_coding MGP_129S1SvImJ_T0020270.1 MGP_129S1SvImJ_G0016100.1 mouse_genomes_project 1 65198722 65222947 - MGP_129S1SvImJ_P0020270 Akr1cl protein_coding protein_coding MGP_129S1SvImJ_T0020271.1 MGP_129S1SvImJ_G0016100.1 mouse_genomes_project 1 65200502 65202576 - Akr1cl protein_coding retained_intron MGP_129S1SvImJ_T0020272.1 MGP_129S1SvImJ_G0016100.1 mouse_genomes_project 1 65202100 65222874 - MGP_129S1SvImJ_P0020272 Akr1cl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020273.1 MGP_129S1SvImJ_G0016100.1 mouse_genomes_project 1 65216416 65222920 - Akr1cl protein_coding processed_transcript MGP_129S1SvImJ_T0020274.1 MGP_129S1SvImJ_G0016100.1 mouse_genomes_project 1 65218258 65222936 - Akr1cl protein_coding retained_intron MGP_129S1SvImJ_T0011945.1 MGP_129S1SvImJ_G0010034.1 mouse_genomes_project 1 21129892 21130536 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012128.1 MGP_129S1SvImJ_G0010217.1 mouse_genomes_project 1 82423954 82428722 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019850.1 MGP_129S1SvImJ_G0016026.1 mouse_genomes_project 1 54138962 54238254 - MGP_129S1SvImJ_P0019850 Pgap1 protein_coding protein_coding MGP_129S1SvImJ_T0019851.1 MGP_129S1SvImJ_G0016026.1 mouse_genomes_project 1 54200277 54238256 - Pgap1 protein_coding retained_intron MGP_129S1SvImJ_T0019852.1 MGP_129S1SvImJ_G0016026.1 mouse_genomes_project 1 54202161 54205408 - Pgap1 protein_coding retained_intron MGP_129S1SvImJ_T0019853.1 MGP_129S1SvImJ_G0016026.1 mouse_genomes_project 1 54235174 54238199 - Pgap1 protein_coding retained_intron MGP_129S1SvImJ_T0006004.1 MGP_129S1SvImJ_G0005032.1 mouse_genomes_project 1 172515293 172535721 - Gm16701 lincRNA lincRNA MGP_129S1SvImJ_T0011898.1 MGP_129S1SvImJ_G0009987.1 mouse_genomes_project 1 6455366 6455884 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009489.1 MGP_129S1SvImJ_G0007605.1 mouse_genomes_project 1 32817819 32817898 - Mir5103 miRNA miRNA MGP_129S1SvImJ_T0019881.1 MGP_129S1SvImJ_G0016030.1 mouse_genomes_project 1 54789069 54801909 - MGP_129S1SvImJ_P0019881 protein_coding protein_coding MGP_129S1SvImJ_T0019882.1 MGP_129S1SvImJ_G0016030.1 mouse_genomes_project 1 54796951 54802128 - MGP_129S1SvImJ_P0019882 protein_coding protein_coding MGP_129S1SvImJ_T0019883.1 MGP_129S1SvImJ_G0016030.1 mouse_genomes_project 1 54798417 54802128 - MGP_129S1SvImJ_P0019883 protein_coding protein_coding MGP_129S1SvImJ_T0011982.1 MGP_129S1SvImJ_G0010071.1 mouse_genomes_project 1 33055199 33055845 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011869.1 MGP_129S1SvImJ_G0009958.1 mouse_genomes_project 1 1554340 1558841 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098800.1 MGP_129S1SvImJ_G0036884.1 mouse_genomes_project 1 193925049 193928542 - Gm15509 sense_intronic sense_intronic MGP_129S1SvImJ_T0000630.1 MGP_129S1SvImJ_G0000569.1 mouse_genomes_project 1 127901234 127904266 - TEC TEC MGP_129S1SvImJ_T0005753.1 MGP_129S1SvImJ_G0004833.1 mouse_genomes_project 1 55664537 55711516 + 9130227L01Rik lincRNA lincRNA MGP_129S1SvImJ_T0005754.1 MGP_129S1SvImJ_G0004833.1 mouse_genomes_project 1 55699013 55711746 + 9130227L01Rik lincRNA lincRNA MGP_129S1SvImJ_T0005779.1 MGP_129S1SvImJ_G0004853.1 mouse_genomes_project 1 63414894 63421161 - Gm11608 lincRNA lincRNA MGP_129S1SvImJ_T0005780.1 MGP_129S1SvImJ_G0004853.1 mouse_genomes_project 1 63414894 63421166 - Gm11608 lincRNA lincRNA MGP_129S1SvImJ_T0000397.1 MGP_129S1SvImJ_G0000339.1 mouse_genomes_project 1 7324017 7324937 - TEC TEC MGP_129S1SvImJ_T0020869.1 MGP_129S1SvImJ_G0016209.1 mouse_genomes_project 1 80998918 81016751 - MGP_129S1SvImJ_P0020869 Fam124b protein_coding protein_coding MGP_129S1SvImJ_T0020870.1 MGP_129S1SvImJ_G0016209.1 mouse_genomes_project 1 81000537 81021305 - Fam124b protein_coding processed_transcript MGP_129S1SvImJ_T0099121.1 MGP_129S1SvImJ_G0037188.1 mouse_genomes_project 1 141152268 141152372 - Gm25609 snRNA snRNA MGP_129S1SvImJ_T0021271.1 MGP_129S1SvImJ_G0016298.1 mouse_genomes_project 1 92482347 92483267 + MGP_129S1SvImJ_P0021271 Prlh protein_coding protein_coding MGP_129S1SvImJ_T0012269.1 MGP_129S1SvImJ_G0010358.1 mouse_genomes_project 1 142721875 142722197 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006010.1 MGP_129S1SvImJ_G0005037.1 mouse_genomes_project 1 175863880 175866275 - Gm37502 lincRNA lincRNA MGP_129S1SvImJ_T0019788.1 MGP_129S1SvImJ_G0016011.1 mouse_genomes_project 1 52309795 52345682 - MGP_129S1SvImJ_P0019788 Inpp1 protein_coding protein_coding MGP_129S1SvImJ_T0019789.1 MGP_129S1SvImJ_G0016011.1 mouse_genomes_project 1 52314611 52324430 - MGP_129S1SvImJ_P0019789 Inpp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019790.1 MGP_129S1SvImJ_G0016011.1 mouse_genomes_project 1 52314999 52319990 - Inpp1 protein_coding retained_intron MGP_129S1SvImJ_T0019791.1 MGP_129S1SvImJ_G0016011.1 mouse_genomes_project 1 52319606 52345562 - MGP_129S1SvImJ_P0019791 Inpp1 protein_coding protein_coding MGP_129S1SvImJ_T0019792.1 MGP_129S1SvImJ_G0016011.1 mouse_genomes_project 1 52321920 52345445 - Inpp1 protein_coding retained_intron MGP_129S1SvImJ_T0019793.1 MGP_129S1SvImJ_G0016011.1 mouse_genomes_project 1 52322007 52325313 - MGP_129S1SvImJ_P0019793 Inpp1 protein_coding protein_coding MGP_129S1SvImJ_T0005888.1 MGP_129S1SvImJ_G0004940.1 mouse_genomes_project 1 115718274 115719792 + Gm28189 lincRNA lincRNA MGP_129S1SvImJ_T0018973.1 MGP_129S1SvImJ_G0015846.1 mouse_genomes_project 1 12184461 12187112 - MGP_129S1SvImJ_P0018973 Msc protein_coding protein_coding MGP_129S1SvImJ_T0018974.1 MGP_129S1SvImJ_G0015846.1 mouse_genomes_project 1 12184861 12186475 - MGP_129S1SvImJ_P0018974 Msc protein_coding protein_coding MGP_129S1SvImJ_T0018975.1 MGP_129S1SvImJ_G0015846.1 mouse_genomes_project 1 12185050 12185787 - Msc protein_coding retained_intron MGP_129S1SvImJ_T0018976.1 MGP_129S1SvImJ_G0015846.1 mouse_genomes_project 1 12185888 12187114 - Msc protein_coding retained_intron MGP_129S1SvImJ_T0012141.1 MGP_129S1SvImJ_G0010230.1 mouse_genomes_project 1 87579265 87580028 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005999.1 MGP_129S1SvImJ_G0005027.1 mouse_genomes_project 1 171225549 171226739 + Gm37073 lincRNA lincRNA MGP_129S1SvImJ_T0005991.1 MGP_129S1SvImJ_G0005022.1 mouse_genomes_project 1 170095520 170120533 - lincRNA lincRNA MGP_129S1SvImJ_T0098795.1 MGP_129S1SvImJ_G0036879.1 mouse_genomes_project 1 165519694 165526159 - Gm37529 sense_intronic sense_intronic MGP_129S1SvImJ_T0100359.1 MGP_129S1SvImJ_G0038426.1 mouse_genomes_project 1 104929334 104929468 - Gm22034 snoRNA snoRNA MGP_129S1SvImJ_T0023543.1 MGP_129S1SvImJ_G0016777.1 mouse_genomes_project 1 177931820 177971595 + MGP_129S1SvImJ_P0023543 protein_coding protein_coding MGP_129S1SvImJ_T0023544.1 MGP_129S1SvImJ_G0016777.1 mouse_genomes_project 1 177931934 177942875 + protein_coding retained_intron MGP_129S1SvImJ_T0023545.1 MGP_129S1SvImJ_G0016777.1 mouse_genomes_project 1 177932096 177960249 + MGP_129S1SvImJ_P0023545 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023546.1 MGP_129S1SvImJ_G0016777.1 mouse_genomes_project 1 177932122 177954158 + protein_coding retained_intron MGP_129S1SvImJ_T0023547.1 MGP_129S1SvImJ_G0016777.1 mouse_genomes_project 1 177932123 177971600 + MGP_129S1SvImJ_P0023547 protein_coding protein_coding MGP_129S1SvImJ_T0023548.1 MGP_129S1SvImJ_G0016777.1 mouse_genomes_project 1 177944564 177950587 + protein_coding processed_transcript MGP_129S1SvImJ_T0023549.1 MGP_129S1SvImJ_G0016777.1 mouse_genomes_project 1 177949058 177955689 + MGP_129S1SvImJ_P0023549 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023550.1 MGP_129S1SvImJ_G0016777.1 mouse_genomes_project 1 177961489 177964868 + protein_coding retained_intron MGP_129S1SvImJ_T0023551.1 MGP_129S1SvImJ_G0016777.1 mouse_genomes_project 1 177963636 177971598 + protein_coding retained_intron MGP_129S1SvImJ_T0023552.1 MGP_129S1SvImJ_G0016777.1 mouse_genomes_project 1 177967448 177968687 + protein_coding retained_intron MGP_129S1SvImJ_T0023615.1 MGP_129S1SvImJ_G0016791.1 mouse_genomes_project 1 178393440 178398425 + Cfap45 protein_coding retained_intron MGP_129S1SvImJ_T0023616.1 MGP_129S1SvImJ_G0016791.1 mouse_genomes_project 1 178393683 178419943 + MGP_129S1SvImJ_P0023616 Cfap45 protein_coding protein_coding MGP_129S1SvImJ_T0023617.1 MGP_129S1SvImJ_G0016791.1 mouse_genomes_project 1 178393775 178406861 + Cfap45 protein_coding retained_intron MGP_129S1SvImJ_T0023618.1 MGP_129S1SvImJ_G0016791.1 mouse_genomes_project 1 178393778 178406755 + MGP_129S1SvImJ_P0023618 Cfap45 protein_coding protein_coding MGP_129S1SvImJ_T0023619.1 MGP_129S1SvImJ_G0016791.1 mouse_genomes_project 1 178393820 178406732 + MGP_129S1SvImJ_P0023619 Cfap45 protein_coding protein_coding MGP_129S1SvImJ_T0023620.1 MGP_129S1SvImJ_G0016791.1 mouse_genomes_project 1 178400249 178406815 + MGP_129S1SvImJ_P0023620 Cfap45 protein_coding protein_coding MGP_129S1SvImJ_T0023621.1 MGP_129S1SvImJ_G0016791.1 mouse_genomes_project 1 178400610 178406815 + MGP_129S1SvImJ_P0023621 Cfap45 protein_coding protein_coding MGP_129S1SvImJ_T0023622.1 MGP_129S1SvImJ_G0016791.1 mouse_genomes_project 1 178411746 178414719 + MGP_129S1SvImJ_P0023622 Cfap45 protein_coding protein_coding MGP_129S1SvImJ_T0017033.1 MGP_129S1SvImJ_G0015102.1 mouse_genomes_project 1 75462763 75493666 + Gm16582 processed_transcript processed_transcript MGP_129S1SvImJ_T0024014.1 MGP_129S1SvImJ_G0016899.1 mouse_genomes_project 1 189626544 189650099 + MGP_129S1SvImJ_P0024014 Tlr5 protein_coding protein_coding MGP_129S1SvImJ_T0024015.1 MGP_129S1SvImJ_G0016899.1 mouse_genomes_project 1 189626544 189650452 + MGP_129S1SvImJ_P0024015 Tlr5 protein_coding protein_coding MGP_129S1SvImJ_T0024016.1 MGP_129S1SvImJ_G0016899.1 mouse_genomes_project 1 189626578 189643814 + Tlr5 protein_coding processed_transcript MGP_129S1SvImJ_T0024017.1 MGP_129S1SvImJ_G0016899.1 mouse_genomes_project 1 189626584 189643578 + Tlr5 protein_coding processed_transcript MGP_129S1SvImJ_T0024018.1 MGP_129S1SvImJ_G0016899.1 mouse_genomes_project 1 189646583 189650407 + MGP_129S1SvImJ_P0024018 Tlr5 protein_coding protein_coding MGP_129S1SvImJ_T0020553.1 MGP_129S1SvImJ_G0016156.1 mouse_genomes_project 1 75197059 75200892 + MGP_129S1SvImJ_P0020553 Bcs1l protein_coding protein_coding MGP_129S1SvImJ_T0020554.1 MGP_129S1SvImJ_G0016156.1 mouse_genomes_project 1 75197070 75201210 + MGP_129S1SvImJ_P0020554 Bcs1l protein_coding protein_coding MGP_129S1SvImJ_T0020555.1 MGP_129S1SvImJ_G0016156.1 mouse_genomes_project 1 75197144 75200957 + MGP_129S1SvImJ_P0020555 Bcs1l protein_coding protein_coding MGP_129S1SvImJ_T0020556.1 MGP_129S1SvImJ_G0016156.1 mouse_genomes_project 1 75199033 75199676 + Bcs1l protein_coding retained_intron MGP_129S1SvImJ_T0000551.1 MGP_129S1SvImJ_G0000490.1 mouse_genomes_project 1 80393827 80395259 - TEC TEC MGP_129S1SvImJ_T0100392.1 MGP_129S1SvImJ_G0038459.1 mouse_genomes_project 1 166288695 166288772 + Snord80 snoRNA snoRNA MGP_129S1SvImJ_T0012362.1 MGP_129S1SvImJ_G0010451.1 mouse_genomes_project 1 184572349 184572723 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019969.1 MGP_129S1SvImJ_G0016050.1 mouse_genomes_project 1 58273017 58288589 - Clk1 protein_coding retained_intron MGP_129S1SvImJ_T0019970.1 MGP_129S1SvImJ_G0016050.1 mouse_genomes_project 1 58274828 58275690 - Clk1 protein_coding processed_transcript MGP_129S1SvImJ_T0019971.1 MGP_129S1SvImJ_G0016050.1 mouse_genomes_project 1 58274828 58276266 - Clk1 protein_coding processed_transcript MGP_129S1SvImJ_T0019972.1 MGP_129S1SvImJ_G0016050.1 mouse_genomes_project 1 58274828 58279602 - Clk1 protein_coding retained_intron MGP_129S1SvImJ_T0019973.1 MGP_129S1SvImJ_G0016050.1 mouse_genomes_project 1 58274828 58288589 - MGP_129S1SvImJ_P0019973 Clk1 protein_coding protein_coding MGP_129S1SvImJ_T0019974.1 MGP_129S1SvImJ_G0016050.1 mouse_genomes_project 1 58274828 58288589 - MGP_129S1SvImJ_P0019974 Clk1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019975.1 MGP_129S1SvImJ_G0016050.1 mouse_genomes_project 1 58274828 58288589 - MGP_129S1SvImJ_P0019975 Clk1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019976.1 MGP_129S1SvImJ_G0016050.1 mouse_genomes_project 1 58275144 58276654 - Clk1 protein_coding processed_transcript MGP_129S1SvImJ_T0019977.1 MGP_129S1SvImJ_G0016050.1 mouse_genomes_project 1 58277418 58283201 - Clk1 protein_coding retained_intron MGP_129S1SvImJ_T0019978.1 MGP_129S1SvImJ_G0016050.1 mouse_genomes_project 1 58277443 58284062 - Clk1 protein_coding retained_intron MGP_129S1SvImJ_T0019979.1 MGP_129S1SvImJ_G0016050.1 mouse_genomes_project 1 58278978 58288589 - Clk1 protein_coding retained_intron MGP_129S1SvImJ_T0019980.1 MGP_129S1SvImJ_G0016050.1 mouse_genomes_project 1 58279746 58280263 - Clk1 protein_coding retained_intron MGP_129S1SvImJ_T0019981.1 MGP_129S1SvImJ_G0016050.1 mouse_genomes_project 1 58284427 58288589 - Clk1 protein_coding retained_intron MGP_129S1SvImJ_T0012166.1 MGP_129S1SvImJ_G0010255.1 mouse_genomes_project 1 100552062 100552776 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022714.1 MGP_129S1SvImJ_G0016606.1 mouse_genomes_project 1 158761850 158771606 + MGP_129S1SvImJ_P0022714 Glul protein_coding protein_coding MGP_129S1SvImJ_T0022715.1 MGP_129S1SvImJ_G0016606.1 mouse_genomes_project 1 158762512 158769101 + MGP_129S1SvImJ_P0022715 Glul protein_coding protein_coding MGP_129S1SvImJ_T0022716.1 MGP_129S1SvImJ_G0016606.1 mouse_genomes_project 1 158763022 158768317 + MGP_129S1SvImJ_P0022716 Glul protein_coding protein_coding MGP_129S1SvImJ_T0022717.1 MGP_129S1SvImJ_G0016606.1 mouse_genomes_project 1 158765758 158768990 + Glul protein_coding processed_transcript MGP_129S1SvImJ_T0022718.1 MGP_129S1SvImJ_G0016606.1 mouse_genomes_project 1 158768003 158769077 + Glul protein_coding retained_intron MGP_129S1SvImJ_T0012195.1 MGP_129S1SvImJ_G0010284.1 mouse_genomes_project 1 110646125 110648597 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021817.1 MGP_129S1SvImJ_G0016416.1 mouse_genomes_project 1 128774542 128986523 + MGP_129S1SvImJ_P0021817 Gpr39 protein_coding protein_coding MGP_129S1SvImJ_T0021818.1 MGP_129S1SvImJ_G0016416.1 mouse_genomes_project 1 128948853 128985834 + Gpr39 protein_coding processed_transcript MGP_129S1SvImJ_T0000788.1 MGP_129S1SvImJ_G0000724.1 mouse_genomes_project 1 186783369 186790716 + TEC TEC MGP_129S1SvImJ_T0101830.1 MGP_129S1SvImJ_G0039785.1 mouse_genomes_project 1 58543063 58548516 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101831.1 MGP_129S1SvImJ_G0039785.1 mouse_genomes_project 1 58547633 58547763 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0100331.1 MGP_129S1SvImJ_G0038398.1 mouse_genomes_project 1 51440060 51440182 - Gm27607 snoRNA snoRNA MGP_129S1SvImJ_T0009491.1 MGP_129S1SvImJ_G0007607.1 mouse_genomes_project 1 34873786 34873863 - Mir6898 miRNA miRNA MGP_129S1SvImJ_T0002945.1 MGP_129S1SvImJ_G0002773.1 mouse_genomes_project 1 166281707 166282576 + Gm37362 antisense antisense MGP_129S1SvImJ_T0021630.1 MGP_129S1SvImJ_G0016374.1 mouse_genomes_project 1 109046891 109071301 + MGP_129S1SvImJ_P0021630 Serpinb5 protein_coding protein_coding MGP_129S1SvImJ_T0021631.1 MGP_129S1SvImJ_G0016374.1 mouse_genomes_project 1 109046892 109068296 + MGP_129S1SvImJ_P0021631 Serpinb5 protein_coding protein_coding MGP_129S1SvImJ_T0021632.1 MGP_129S1SvImJ_G0016374.1 mouse_genomes_project 1 109046921 109071301 + MGP_129S1SvImJ_P0021632 Serpinb5 protein_coding protein_coding MGP_129S1SvImJ_T0021633.1 MGP_129S1SvImJ_G0016374.1 mouse_genomes_project 1 109058188 109071300 + MGP_129S1SvImJ_P0021633 Serpinb5 protein_coding protein_coding MGP_129S1SvImJ_T0000450.1 MGP_129S1SvImJ_G0000390.1 mouse_genomes_project 1 23727584 23728806 + TEC TEC MGP_129S1SvImJ_T0005677.1 MGP_129S1SvImJ_G0004778.1 mouse_genomes_project 1 15900984 15908333 + lincRNA lincRNA MGP_129S1SvImJ_T0000590.1 MGP_129S1SvImJ_G0000529.1 mouse_genomes_project 1 92403269 92404103 - TEC TEC MGP_129S1SvImJ_T0099094.1 MGP_129S1SvImJ_G0037161.1 mouse_genomes_project 1 74795730 74795837 + Gm25524 snRNA snRNA MGP_129S1SvImJ_T0023475.1 MGP_129S1SvImJ_G0016757.1 mouse_genomes_project 1 177139994 177155304 + MGP_129S1SvImJ_P0023475 Pfdn2 protein_coding protein_coding MGP_129S1SvImJ_T0023476.1 MGP_129S1SvImJ_G0016757.1 mouse_genomes_project 1 177152432 177154016 + Pfdn2 protein_coding processed_transcript MGP_129S1SvImJ_T0009549.1 MGP_129S1SvImJ_G0007665.1 mouse_genomes_project 1 149376360 149376462 - Gm25708 miRNA miRNA MGP_129S1SvImJ_T0012367.1 MGP_129S1SvImJ_G0010456.1 mouse_genomes_project 1 187542367 187543014 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012188.1 MGP_129S1SvImJ_G0010277.1 mouse_genomes_project 1 108598622 108598893 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002873.1 MGP_129S1SvImJ_G0002718.1 mouse_genomes_project 1 94156730 94157106 - 1700054K02Rik antisense antisense MGP_129S1SvImJ_T0099086.1 MGP_129S1SvImJ_G0037153.1 mouse_genomes_project 1 63739235 63739338 - Gm22281 snRNA snRNA MGP_129S1SvImJ_T0000667.1 MGP_129S1SvImJ_G0000605.1 mouse_genomes_project 1 139685036 139687732 - TEC TEC MGP_129S1SvImJ_T0021673.1 MGP_129S1SvImJ_G0016388.1 mouse_genomes_project 1 118220960 119180213 + MGP_129S1SvImJ_P0021673 Cntnap5a protein_coding protein_coding MGP_129S1SvImJ_T0021674.1 MGP_129S1SvImJ_G0016388.1 mouse_genomes_project 1 118221341 119173573 + MGP_129S1SvImJ_P0021674 Cntnap5a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0021204.1 MGP_129S1SvImJ_G0016277.1 mouse_genomes_project 1 89548668 89619897 + MGP_129S1SvImJ_P0021204 protein_coding protein_coding MGP_129S1SvImJ_T0021205.1 MGP_129S1SvImJ_G0016277.1 mouse_genomes_project 1 89548670 89629383 + MGP_129S1SvImJ_P0021205 protein_coding protein_coding MGP_129S1SvImJ_T0021206.1 MGP_129S1SvImJ_G0016277.1 mouse_genomes_project 1 89548720 89627807 + MGP_129S1SvImJ_P0021206 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0009516.1 MGP_129S1SvImJ_G0007632.1 mouse_genomes_project 1 75773742 75773858 - Gm27943 miRNA miRNA MGP_129S1SvImJ_T0099106.1 MGP_129S1SvImJ_G0037173.1 mouse_genomes_project 1 120174056 120174220 + Gm24030 snRNA snRNA MGP_129S1SvImJ_T0006040.1 MGP_129S1SvImJ_G0005061.1 mouse_genomes_project 1 190361420 190425008 + Gm34068 lincRNA lincRNA MGP_129S1SvImJ_T0022074.1 MGP_129S1SvImJ_G0016473.1 mouse_genomes_project 1 135963815 135995022 + MGP_129S1SvImJ_P0022074 Rbbp5 protein_coding protein_coding MGP_129S1SvImJ_T0022075.1 MGP_129S1SvImJ_G0016473.1 mouse_genomes_project 1 135963885 135996191 + MGP_129S1SvImJ_P0022075 Rbbp5 protein_coding protein_coding MGP_129S1SvImJ_T0022076.1 MGP_129S1SvImJ_G0016473.1 mouse_genomes_project 1 135963941 135976937 + MGP_129S1SvImJ_P0022076 Rbbp5 protein_coding protein_coding MGP_129S1SvImJ_T0022077.1 MGP_129S1SvImJ_G0016473.1 mouse_genomes_project 1 135963959 135991510 + MGP_129S1SvImJ_P0022077 Rbbp5 protein_coding protein_coding MGP_129S1SvImJ_T0022078.1 MGP_129S1SvImJ_G0016473.1 mouse_genomes_project 1 135964092 135977021 + MGP_129S1SvImJ_P0022078 Rbbp5 protein_coding protein_coding MGP_129S1SvImJ_T0022079.1 MGP_129S1SvImJ_G0016473.1 mouse_genomes_project 1 135991450 135996187 + Rbbp5 protein_coding retained_intron MGP_129S1SvImJ_T0012036.1 MGP_129S1SvImJ_G0010125.1 mouse_genomes_project 1 48999232 48999669 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000517.1 MGP_129S1SvImJ_G0000456.1 mouse_genomes_project 1 61739044 61741780 + TEC TEC MGP_129S1SvImJ_T0098774.1 MGP_129S1SvImJ_G0036859.1 mouse_genomes_project 1 50645483 50647758 + Gm28320 sense_intronic sense_intronic MGP_129S1SvImJ_T0021584.1 MGP_129S1SvImJ_G0016365.1 mouse_genomes_project 1 107367761 107457777 - MGP_129S1SvImJ_P0021584 Rnf152 protein_coding protein_coding MGP_129S1SvImJ_T0021585.1 MGP_129S1SvImJ_G0016365.1 mouse_genomes_project 1 107367764 107457817 - MGP_129S1SvImJ_P0021585 Rnf152 protein_coding protein_coding MGP_129S1SvImJ_T0021294.1 MGP_129S1SvImJ_G0016302.1 mouse_genomes_project 1 92707552 92736295 + MGP_129S1SvImJ_P0021294 Ramp1 protein_coding protein_coding MGP_129S1SvImJ_T0021295.1 MGP_129S1SvImJ_G0016302.1 mouse_genomes_project 1 92707772 92736295 + MGP_129S1SvImJ_P0021295 Ramp1 protein_coding protein_coding MGP_129S1SvImJ_T0021296.1 MGP_129S1SvImJ_G0016302.1 mouse_genomes_project 1 92707776 92758781 + MGP_129S1SvImJ_P0021296 Ramp1 protein_coding protein_coding MGP_129S1SvImJ_T0011268.1 MGP_129S1SvImJ_G0009384.1 mouse_genomes_project 1 63320716 63320892 + Gm27390 misc_RNA misc_RNA MGP_129S1SvImJ_T0020545.1 MGP_129S1SvImJ_G0016155.1 mouse_genomes_project 1 75173900 75196799 - MGP_129S1SvImJ_P0020545 Zfp142 protein_coding protein_coding MGP_129S1SvImJ_T0020546.1 MGP_129S1SvImJ_G0016155.1 mouse_genomes_project 1 75175199 75196796 - MGP_129S1SvImJ_P0020546 Zfp142 protein_coding protein_coding MGP_129S1SvImJ_T0020547.1 MGP_129S1SvImJ_G0016155.1 mouse_genomes_project 1 75175275 75196916 - MGP_129S1SvImJ_P0020547 Zfp142 protein_coding protein_coding MGP_129S1SvImJ_T0020548.1 MGP_129S1SvImJ_G0016155.1 mouse_genomes_project 1 75175456 75197017 - MGP_129S1SvImJ_P0020548 Zfp142 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020549.1 MGP_129S1SvImJ_G0016155.1 mouse_genomes_project 1 75175642 75194436 - MGP_129S1SvImJ_P0020549 Zfp142 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020550.1 MGP_129S1SvImJ_G0016155.1 mouse_genomes_project 1 75190997 75196966 - Zfp142 protein_coding retained_intron MGP_129S1SvImJ_T0020551.1 MGP_129S1SvImJ_G0016155.1 mouse_genomes_project 1 75191004 75196723 - Zfp142 protein_coding retained_intron MGP_129S1SvImJ_T0020552.1 MGP_129S1SvImJ_G0016155.1 mouse_genomes_project 1 75194357 75196904 - Zfp142 protein_coding processed_transcript MGP_129S1SvImJ_T0006074.1 MGP_129S1SvImJ_G0005086.1 mouse_genomes_project 1 198299887 198322505 + Gm37168 lincRNA lincRNA MGP_129S1SvImJ_T0003018.1 MGP_129S1SvImJ_G0002829.1 mouse_genomes_project 1 199120585 199129045 + Gm26879 antisense antisense MGP_129S1SvImJ_T0099135.1 MGP_129S1SvImJ_G0037202.1 mouse_genomes_project 1 176781558 176781722 + Gm26110 snRNA snRNA MGP_129S1SvImJ_T0023266.1 MGP_129S1SvImJ_G0016711.1 mouse_genomes_project 1 172772152 172841724 - MGP_129S1SvImJ_P0023266 Uck2 protein_coding protein_coding MGP_129S1SvImJ_T0023267.1 MGP_129S1SvImJ_G0016711.1 mouse_genomes_project 1 172775115 172841288 - MGP_129S1SvImJ_P0023267 Uck2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023268.1 MGP_129S1SvImJ_G0016711.1 mouse_genomes_project 1 172775501 172786157 - MGP_129S1SvImJ_P0023268 Uck2 protein_coding protein_coding MGP_129S1SvImJ_T0023269.1 MGP_129S1SvImJ_G0016711.1 mouse_genomes_project 1 172775606 172792509 - MGP_129S1SvImJ_P0023269 Uck2 protein_coding protein_coding MGP_129S1SvImJ_T0023270.1 MGP_129S1SvImJ_G0016711.1 mouse_genomes_project 1 172779183 172841005 - MGP_129S1SvImJ_P0023270 Uck2 protein_coding protein_coding MGP_129S1SvImJ_T0023271.1 MGP_129S1SvImJ_G0016711.1 mouse_genomes_project 1 172784013 172841282 - MGP_129S1SvImJ_P0023271 Uck2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023272.1 MGP_129S1SvImJ_G0016711.1 mouse_genomes_project 1 172786803 172841111 - Uck2 protein_coding processed_transcript MGP_129S1SvImJ_T0006008.1 MGP_129S1SvImJ_G0005035.1 mouse_genomes_project 1 174954215 174974129 - Gm37839 lincRNA lincRNA MGP_129S1SvImJ_T0019081.1 MGP_129S1SvImJ_G0015874.1 mouse_genomes_project 1 18580255 18584119 + Efhc1 protein_coding processed_transcript MGP_129S1SvImJ_T0019082.1 MGP_129S1SvImJ_G0015874.1 mouse_genomes_project 1 18580317 18622922 + MGP_129S1SvImJ_P0019082 Efhc1 protein_coding protein_coding MGP_129S1SvImJ_T0012299.1 MGP_129S1SvImJ_G0010388.1 mouse_genomes_project 1 155788212 155789151 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023634.1 MGP_129S1SvImJ_G0016798.1 mouse_genomes_project 1 178844727 178846163 + MGP_129S1SvImJ_P0023634 Olfr16 protein_coding protein_coding MGP_129S1SvImJ_T0012308.1 MGP_129S1SvImJ_G0010397.1 mouse_genomes_project 1 159209879 159210432 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000706.1 MGP_129S1SvImJ_G0000643.1 mouse_genomes_project 1 156229481 156232511 - TEC TEC MGP_129S1SvImJ_T0100354.1 MGP_129S1SvImJ_G0038421.1 mouse_genomes_project 1 96728608 96728718 - Gm23181 snoRNA snoRNA MGP_129S1SvImJ_T0009480.1 MGP_129S1SvImJ_G0007596.1 mouse_genomes_project 1 18293273 18293346 + Mir206 miRNA miRNA MGP_129S1SvImJ_T0005751.1 MGP_129S1SvImJ_G0004831.1 mouse_genomes_project 1 52035326 52099354 + Gm553 lincRNA lincRNA MGP_129S1SvImJ_T0011983.1 MGP_129S1SvImJ_G0010072.1 mouse_genomes_project 1 33177996 33178144 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011980.1 MGP_129S1SvImJ_G0010069.1 mouse_genomes_project 1 33014607 33014842 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002765.1 MGP_129S1SvImJ_G0002640.1 mouse_genomes_project 1 3391021 3396449 - 4732440D04Rik antisense antisense MGP_129S1SvImJ_T0002766.1 MGP_129S1SvImJ_G0002640.1 mouse_genomes_project 1 3394448 3395746 - 4732440D04Rik antisense antisense MGP_129S1SvImJ_T0002767.1 MGP_129S1SvImJ_G0002640.1 mouse_genomes_project 1 3395767 3396448 - 4732440D04Rik antisense antisense MGP_129S1SvImJ_T0012122.1 MGP_129S1SvImJ_G0010211.1 mouse_genomes_project 1 78248064 78248356 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012026.1 MGP_129S1SvImJ_G0010115.1 mouse_genomes_project 1 47277028 47277855 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023495.1 MGP_129S1SvImJ_G0016762.1 mouse_genomes_project 1 177220334 177220829 + Tstd1 protein_coding processed_transcript MGP_129S1SvImJ_T0023496.1 MGP_129S1SvImJ_G0016762.1 mouse_genomes_project 1 177220495 177221815 + MGP_129S1SvImJ_P0023496 Tstd1 protein_coding protein_coding MGP_129S1SvImJ_T0023497.1 MGP_129S1SvImJ_G0016762.1 mouse_genomes_project 1 177221181 177221814 + Tstd1 protein_coding retained_intron MGP_129S1SvImJ_T0012156.1 MGP_129S1SvImJ_G0010245.1 mouse_genomes_project 1 94605834 94609210 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000618.1 MGP_129S1SvImJ_G0000557.1 mouse_genomes_project 1 124147125 124150183 + TEC TEC MGP_129S1SvImJ_T0009487.1 MGP_129S1SvImJ_G0007603.1 mouse_genomes_project 1 28146587 28146697 + Gm23771 miRNA miRNA MGP_129S1SvImJ_T0023432.1 MGP_129S1SvImJ_G0016752.1 mouse_genomes_project 1 177063190 177068375 - Ppox protein_coding retained_intron MGP_129S1SvImJ_T0023433.1 MGP_129S1SvImJ_G0016752.1 mouse_genomes_project 1 177064161 177068375 - Ppox protein_coding retained_intron MGP_129S1SvImJ_T0023434.1 MGP_129S1SvImJ_G0016752.1 mouse_genomes_project 1 177064161 177068375 - MGP_129S1SvImJ_P0023434 Ppox protein_coding protein_coding MGP_129S1SvImJ_T0023435.1 MGP_129S1SvImJ_G0016752.1 mouse_genomes_project 1 177064616 177067948 - MGP_129S1SvImJ_P0023435 Ppox protein_coding protein_coding MGP_129S1SvImJ_T0023436.1 MGP_129S1SvImJ_G0016752.1 mouse_genomes_project 1 177065304 177067001 - Ppox protein_coding retained_intron MGP_129S1SvImJ_T0023437.1 MGP_129S1SvImJ_G0016752.1 mouse_genomes_project 1 177067034 177067710 - Ppox protein_coding processed_transcript MGP_129S1SvImJ_T0023438.1 MGP_129S1SvImJ_G0016752.1 mouse_genomes_project 1 177067281 177068375 - Ppox protein_coding retained_intron MGP_129S1SvImJ_T0023439.1 MGP_129S1SvImJ_G0016752.1 mouse_genomes_project 1 177067552 177068308 - Ppox protein_coding retained_intron MGP_129S1SvImJ_T0000478.1 MGP_129S1SvImJ_G0000417.1 mouse_genomes_project 1 36333682 36335900 - TEC TEC MGP_129S1SvImJ_T0102105.1 MGP_129S1SvImJ_G0039940.1 mouse_genomes_project 1 184389763 184390736 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0021608.1 MGP_129S1SvImJ_G0016368.1 mouse_genomes_project 1 107901309 107974412 + MGP_129S1SvImJ_P0021608 Tnfrsf11a protein_coding protein_coding MGP_129S1SvImJ_T0021609.1 MGP_129S1SvImJ_G0016368.1 mouse_genomes_project 1 107901341 107943672 + Tnfrsf11a protein_coding retained_intron MGP_129S1SvImJ_T0021610.1 MGP_129S1SvImJ_G0016368.1 mouse_genomes_project 1 107949124 107954536 + Tnfrsf11a protein_coding retained_intron MGP_129S1SvImJ_T0022219.1 MGP_129S1SvImJ_G0016505.1 mouse_genomes_project 1 138043262 138048300 + MGP_129S1SvImJ_P0022219 4933406M09Rik protein_coding protein_coding MGP_129S1SvImJ_T0021387.1 MGP_129S1SvImJ_G0016324.1 mouse_genomes_project 1 94230529 94233294 - protein_coding retained_intron MGP_129S1SvImJ_T0021388.1 MGP_129S1SvImJ_G0016324.1 mouse_genomes_project 1 94230529 94235308 - MGP_129S1SvImJ_P0021388 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021389.1 MGP_129S1SvImJ_G0016324.1 mouse_genomes_project 1 94230529 94235370 - MGP_129S1SvImJ_P0021389 protein_coding protein_coding MGP_129S1SvImJ_T0021390.1 MGP_129S1SvImJ_G0016324.1 mouse_genomes_project 1 94230529 94233949 - MGP_129S1SvImJ_P0021390 protein_coding protein_coding MGP_129S1SvImJ_T0021391.1 MGP_129S1SvImJ_G0016324.1 mouse_genomes_project 1 94232754 94235370 - protein_coding retained_intron MGP_129S1SvImJ_T0024049.1 MGP_129S1SvImJ_G0016905.1 mouse_genomes_project 1 190081786 190082427 + Hhipl2 protein_coding processed_transcript MGP_129S1SvImJ_T0024050.1 MGP_129S1SvImJ_G0016905.1 mouse_genomes_project 1 190082059 190101497 + MGP_129S1SvImJ_P0024050 Hhipl2 protein_coding protein_coding MGP_129S1SvImJ_T0024051.1 MGP_129S1SvImJ_G0016905.1 mouse_genomes_project 1 190082156 190087183 + Hhipl2 protein_coding processed_transcript MGP_129S1SvImJ_T0024052.1 MGP_129S1SvImJ_G0016905.1 mouse_genomes_project 1 190082361 190101176 + MGP_129S1SvImJ_P0024052 Hhipl2 protein_coding protein_coding MGP_129S1SvImJ_T0006083.1 MGP_129S1SvImJ_G0005094.1 mouse_genomes_project 1 202199438 202199789 - Gm37027 lincRNA lincRNA MGP_129S1SvImJ_T0012105.1 MGP_129S1SvImJ_G0010194.1 mouse_genomes_project 1 69479966 69480352 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005760.1 MGP_129S1SvImJ_G0004838.1 mouse_genomes_project 1 57169059 57187384 - 4930558J18Rik lincRNA lincRNA MGP_129S1SvImJ_T0000486.1 MGP_129S1SvImJ_G0000425.1 mouse_genomes_project 1 41596913 41597589 + TEC TEC MGP_129S1SvImJ_T0000697.1 MGP_129S1SvImJ_G0000634.1 mouse_genomes_project 1 151786322 151787517 - TEC TEC MGP_129S1SvImJ_T0000754.1 MGP_129S1SvImJ_G0000691.1 mouse_genomes_project 1 170879597 170880932 + TEC TEC MGP_129S1SvImJ_T0012228.1 MGP_129S1SvImJ_G0010317.1 mouse_genomes_project 1 122591930 122592293 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021596.1 MGP_129S1SvImJ_G0016367.1 mouse_genomes_project 1 107771941 107798738 + 2310035C23Rik protein_coding processed_transcript MGP_129S1SvImJ_T0021597.1 MGP_129S1SvImJ_G0016367.1 mouse_genomes_project 1 107771941 107874231 + MGP_129S1SvImJ_P0021597 2310035C23Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021598.1 MGP_129S1SvImJ_G0016367.1 mouse_genomes_project 1 107771963 107874234 + MGP_129S1SvImJ_P0021598 2310035C23Rik protein_coding protein_coding MGP_129S1SvImJ_T0021599.1 MGP_129S1SvImJ_G0016367.1 mouse_genomes_project 1 107771993 107875350 + MGP_129S1SvImJ_P0021599 2310035C23Rik protein_coding protein_coding MGP_129S1SvImJ_T0021600.1 MGP_129S1SvImJ_G0016367.1 mouse_genomes_project 1 107772003 107872660 + MGP_129S1SvImJ_P0021600 2310035C23Rik protein_coding protein_coding MGP_129S1SvImJ_T0021601.1 MGP_129S1SvImJ_G0016367.1 mouse_genomes_project 1 107772017 107773231 + 2310035C23Rik protein_coding processed_transcript MGP_129S1SvImJ_T0021602.1 MGP_129S1SvImJ_G0016367.1 mouse_genomes_project 1 107772521 107857446 + 2310035C23Rik protein_coding retained_intron MGP_129S1SvImJ_T0021603.1 MGP_129S1SvImJ_G0016367.1 mouse_genomes_project 1 107808177 107875345 + MGP_129S1SvImJ_P0021603 2310035C23Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021604.1 MGP_129S1SvImJ_G0016367.1 mouse_genomes_project 1 107815344 107830084 + 2310035C23Rik protein_coding retained_intron MGP_129S1SvImJ_T0021605.1 MGP_129S1SvImJ_G0016367.1 mouse_genomes_project 1 107845000 107850642 + 2310035C23Rik protein_coding retained_intron MGP_129S1SvImJ_T0021606.1 MGP_129S1SvImJ_G0016367.1 mouse_genomes_project 1 107859160 107872474 + 2310035C23Rik protein_coding retained_intron MGP_129S1SvImJ_T0021607.1 MGP_129S1SvImJ_G0016367.1 mouse_genomes_project 1 107859928 107869938 + 2310035C23Rik protein_coding retained_intron MGP_129S1SvImJ_T0019955.1 MGP_129S1SvImJ_G0016046.1 mouse_genomes_project 1 57951944 57953824 + Aox3 protein_coding retained_intron MGP_129S1SvImJ_T0019956.1 MGP_129S1SvImJ_G0016046.1 mouse_genomes_project 1 57951950 58042399 + MGP_129S1SvImJ_P0019956 Aox3 protein_coding protein_coding MGP_129S1SvImJ_T0019957.1 MGP_129S1SvImJ_G0016046.1 mouse_genomes_project 1 57951952 57960920 + Aox3 protein_coding retained_intron MGP_129S1SvImJ_T0019958.1 MGP_129S1SvImJ_G0016046.1 mouse_genomes_project 1 57952000 57976428 + MGP_129S1SvImJ_P0019958 Aox3 protein_coding protein_coding MGP_129S1SvImJ_T0019959.1 MGP_129S1SvImJ_G0016046.1 mouse_genomes_project 1 58011714 58014338 + Aox3 protein_coding retained_intron MGP_129S1SvImJ_T0000463.1 MGP_129S1SvImJ_G0000402.1 mouse_genomes_project 1 32116011 32116352 + TEC TEC MGP_129S1SvImJ_T0102068.1 MGP_129S1SvImJ_G0039903.1 mouse_genomes_project 1 94179723 94179769 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0017028.1 MGP_129S1SvImJ_G0015100.1 mouse_genomes_project 1 63343765 63351085 + Platr12 processed_transcript antisense MGP_129S1SvImJ_T0017029.1 MGP_129S1SvImJ_G0015100.1 mouse_genomes_project 1 63344160 63351438 + Platr12 processed_transcript lincRNA MGP_129S1SvImJ_T0000810.1 MGP_129S1SvImJ_G0000745.1 mouse_genomes_project 1 193890461 193893459 - TEC TEC MGP_129S1SvImJ_T0021752.1 MGP_129S1SvImJ_G0016400.1 mouse_genomes_project 1 122697714 122766600 - MGP_129S1SvImJ_P0021752 Cfap221 protein_coding protein_coding MGP_129S1SvImJ_T0021753.1 MGP_129S1SvImJ_G0016400.1 mouse_genomes_project 1 122697892 122764626 - MGP_129S1SvImJ_P0021753 Cfap221 protein_coding protein_coding MGP_129S1SvImJ_T0021754.1 MGP_129S1SvImJ_G0016400.1 mouse_genomes_project 1 122731472 122766644 - MGP_129S1SvImJ_P0021754 Cfap221 protein_coding protein_coding MGP_129S1SvImJ_T0020738.1 MGP_129S1SvImJ_G0016185.1 mouse_genomes_project 1 75926348 75934590 + MGP_129S1SvImJ_P0020738 Des protein_coding protein_coding MGP_129S1SvImJ_T0020739.1 MGP_129S1SvImJ_G0016185.1 mouse_genomes_project 1 75927536 75928414 + Des protein_coding retained_intron MGP_129S1SvImJ_T0020740.1 MGP_129S1SvImJ_G0016185.1 mouse_genomes_project 1 75928040 75929649 + Des protein_coding retained_intron MGP_129S1SvImJ_T0022208.1 MGP_129S1SvImJ_G0016503.1 mouse_genomes_project 1 137944845 138001099 - MGP_129S1SvImJ_P0022208 Ppfia4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0022209.1 MGP_129S1SvImJ_G0016503.1 mouse_genomes_project 1 137944845 137981041 - MGP_129S1SvImJ_P0022209 Ppfia4 protein_coding protein_coding MGP_129S1SvImJ_T0022210.1 MGP_129S1SvImJ_G0016503.1 mouse_genomes_project 1 137944846 137952896 - Ppfia4 protein_coding processed_transcript MGP_129S1SvImJ_T0022211.1 MGP_129S1SvImJ_G0016503.1 mouse_genomes_project 1 137944850 137952858 - Ppfia4 protein_coding retained_intron MGP_129S1SvImJ_T0022212.1 MGP_129S1SvImJ_G0016503.1 mouse_genomes_project 1 137945562 137986703 - MGP_129S1SvImJ_P0022212 Ppfia4 protein_coding protein_coding MGP_129S1SvImJ_T0022213.1 MGP_129S1SvImJ_G0016503.1 mouse_genomes_project 1 137946442 137961391 - Ppfia4 protein_coding retained_intron MGP_129S1SvImJ_T0098416.1 MGP_129S1SvImJ_G0036501.1 mouse_genomes_project 1 83549318 83549416 + n-R5s213 rRNA rRNA MGP_129S1SvImJ_T0003000.1 MGP_129S1SvImJ_G0002818.1 mouse_genomes_project 1 194846593 194849009 - 9330162B11Rik antisense antisense MGP_129S1SvImJ_T0012298.1 MGP_129S1SvImJ_G0010387.1 mouse_genomes_project 1 155201721 155202081 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021208.1 MGP_129S1SvImJ_G0016279.1 mouse_genomes_project 1 89600947 89628377 + MGP_129S1SvImJ_P0021208 Ugt1a2 protein_coding protein_coding MGP_129S1SvImJ_T0011947.1 MGP_129S1SvImJ_G0010036.1 mouse_genomes_project 1 21960644 21961511 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021952.1 MGP_129S1SvImJ_G0016446.1 mouse_genomes_project 1 134338430 134346196 - MGP_129S1SvImJ_P0021952 Il19 protein_coding protein_coding MGP_129S1SvImJ_T0021953.1 MGP_129S1SvImJ_G0016446.1 mouse_genomes_project 1 134338432 134345340 - MGP_129S1SvImJ_P0021953 Il19 protein_coding protein_coding MGP_129S1SvImJ_T0021954.1 MGP_129S1SvImJ_G0016446.1 mouse_genomes_project 1 134338590 134346210 - MGP_129S1SvImJ_P0021954 Il19 protein_coding protein_coding MGP_129S1SvImJ_T0021955.1 MGP_129S1SvImJ_G0016446.1 mouse_genomes_project 1 134338632 134346168 - MGP_129S1SvImJ_P0021955 Il19 protein_coding protein_coding MGP_129S1SvImJ_T0002918.1 MGP_129S1SvImJ_G0002750.1 mouse_genomes_project 1 139002996 139020773 + Gm26642 antisense antisense MGP_129S1SvImJ_T0021481.1 MGP_129S1SvImJ_G0016343.1 mouse_genomes_project 1 95104868 95125596 + MGP_129S1SvImJ_P0021481 Sept2 protein_coding protein_coding MGP_129S1SvImJ_T0021482.1 MGP_129S1SvImJ_G0016343.1 mouse_genomes_project 1 95104871 95126983 + MGP_129S1SvImJ_P0021482 Sept2 protein_coding protein_coding MGP_129S1SvImJ_T0021483.1 MGP_129S1SvImJ_G0016343.1 mouse_genomes_project 1 95104890 95137109 + MGP_129S1SvImJ_P0021483 Sept2 protein_coding protein_coding MGP_129S1SvImJ_T0021484.1 MGP_129S1SvImJ_G0016343.1 mouse_genomes_project 1 95104899 95124253 + Sept2 protein_coding retained_intron MGP_129S1SvImJ_T0021485.1 MGP_129S1SvImJ_G0016343.1 mouse_genomes_project 1 95104913 95123859 + MGP_129S1SvImJ_P0021485 Sept2 protein_coding protein_coding MGP_129S1SvImJ_T0021486.1 MGP_129S1SvImJ_G0016343.1 mouse_genomes_project 1 95104937 95108242 + Sept2 protein_coding retained_intron MGP_129S1SvImJ_T0021487.1 MGP_129S1SvImJ_G0016343.1 mouse_genomes_project 1 95104937 95126987 + MGP_129S1SvImJ_P0021487 Sept2 protein_coding protein_coding MGP_129S1SvImJ_T0021488.1 MGP_129S1SvImJ_G0016343.1 mouse_genomes_project 1 95104986 95127012 + MGP_129S1SvImJ_P0021488 Sept2 protein_coding protein_coding MGP_129S1SvImJ_T0021489.1 MGP_129S1SvImJ_G0016343.1 mouse_genomes_project 1 95105098 95125514 + MGP_129S1SvImJ_P0021489 Sept2 protein_coding protein_coding MGP_129S1SvImJ_T0021490.1 MGP_129S1SvImJ_G0016343.1 mouse_genomes_project 1 95105101 95125596 + MGP_129S1SvImJ_P0021490 Sept2 protein_coding protein_coding MGP_129S1SvImJ_T0021491.1 MGP_129S1SvImJ_G0016343.1 mouse_genomes_project 1 95105351 95127010 + MGP_129S1SvImJ_P0021491 Sept2 protein_coding protein_coding MGP_129S1SvImJ_T0021492.1 MGP_129S1SvImJ_G0016343.1 mouse_genomes_project 1 95131670 95133497 + Sept2 protein_coding retained_intron MGP_129S1SvImJ_T0021493.1 MGP_129S1SvImJ_G0016343.1 mouse_genomes_project 1 95132045 95133824 + MGP_129S1SvImJ_P0021493 Sept2 protein_coding protein_coding MGP_129S1SvImJ_T0012143.1 MGP_129S1SvImJ_G0010232.1 mouse_genomes_project 1 88079943 88080365 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022334.1 MGP_129S1SvImJ_G0016529.1 mouse_genomes_project 1 139604434 139620992 + MGP_129S1SvImJ_P0022334 Lad1 protein_coding protein_coding MGP_129S1SvImJ_T0022335.1 MGP_129S1SvImJ_G0016529.1 mouse_genomes_project 1 139617643 139620357 + Lad1 protein_coding processed_transcript MGP_129S1SvImJ_T0022336.1 MGP_129S1SvImJ_G0016529.1 mouse_genomes_project 1 139618183 139620112 + Lad1 protein_coding processed_transcript MGP_129S1SvImJ_T0005861.1 MGP_129S1SvImJ_G0004919.1 mouse_genomes_project 1 94308773 94311742 - Gm29483 lincRNA lincRNA MGP_129S1SvImJ_T0012151.1 MGP_129S1SvImJ_G0010240.1 mouse_genomes_project 1 92699181 92699901 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002968.1 MGP_129S1SvImJ_G0002790.1 mouse_genomes_project 1 176723511 176729880 + Gm38204 antisense antisense MGP_129S1SvImJ_T0009514.1 MGP_129S1SvImJ_G0007630.1 mouse_genomes_project 1 75195666 75195743 - Gm25035 miRNA miRNA MGP_129S1SvImJ_T0017011.1 MGP_129S1SvImJ_G0015092.1 mouse_genomes_project 1 35096153 35098172 + D430040D24Rik processed_transcript retained_intron MGP_129S1SvImJ_T0017012.1 MGP_129S1SvImJ_G0015092.1 mouse_genomes_project 1 35096811 35104118 + D430040D24Rik processed_transcript antisense MGP_129S1SvImJ_T0012027.1 MGP_129S1SvImJ_G0010116.1 mouse_genomes_project 1 47664155 47665141 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000631.1 MGP_129S1SvImJ_G0000570.1 mouse_genomes_project 1 129033512 129036209 - TEC TEC MGP_129S1SvImJ_T0018996.1 MGP_129S1SvImJ_G0015854.1 mouse_genomes_project 1 13581865 13611326 + MGP_129S1SvImJ_P0018996 Rdh10 protein_coding protein_coding MGP_129S1SvImJ_T0018997.1 MGP_129S1SvImJ_G0015854.1 mouse_genomes_project 1 13608163 13610209 + Rdh10 protein_coding retained_intron MGP_129S1SvImJ_T0021233.1 MGP_129S1SvImJ_G0016290.1 mouse_genomes_project 1 90903717 91359471 + MGP_129S1SvImJ_P0021233 Agap1 protein_coding protein_coding MGP_129S1SvImJ_T0021234.1 MGP_129S1SvImJ_G0016290.1 mouse_genomes_project 1 90903785 91351855 + MGP_129S1SvImJ_P0021234 Agap1 protein_coding protein_coding MGP_129S1SvImJ_T0021235.1 MGP_129S1SvImJ_G0016290.1 mouse_genomes_project 1 90904167 90908552 + Agap1 protein_coding retained_intron MGP_129S1SvImJ_T0021236.1 MGP_129S1SvImJ_G0016290.1 mouse_genomes_project 1 91032016 91357131 + MGP_129S1SvImJ_P0021236 Agap1 protein_coding protein_coding MGP_129S1SvImJ_T0021237.1 MGP_129S1SvImJ_G0016290.1 mouse_genomes_project 1 91032527 91350748 + MGP_129S1SvImJ_P0021237 Agap1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0022604.1 MGP_129S1SvImJ_G0016582.1 mouse_genomes_project 1 156189785 156209091 - MGP_129S1SvImJ_P0022604 Rnf2 protein_coding protein_coding MGP_129S1SvImJ_T0022605.1 MGP_129S1SvImJ_G0016582.1 mouse_genomes_project 1 156202026 156234628 - MGP_129S1SvImJ_P0022605 Rnf2 protein_coding protein_coding MGP_129S1SvImJ_T0022606.1 MGP_129S1SvImJ_G0016582.1 mouse_genomes_project 1 156202027 156234768 - MGP_129S1SvImJ_P0022606 Rnf2 protein_coding protein_coding MGP_129S1SvImJ_T0022607.1 MGP_129S1SvImJ_G0016582.1 mouse_genomes_project 1 156203747 156234650 - MGP_129S1SvImJ_P0022607 Rnf2 protein_coding protein_coding MGP_129S1SvImJ_T0022608.1 MGP_129S1SvImJ_G0016582.1 mouse_genomes_project 1 156203779 156204659 - Rnf2 protein_coding retained_intron MGP_129S1SvImJ_T0022609.1 MGP_129S1SvImJ_G0016582.1 mouse_genomes_project 1 156203944 156207048 - Rnf2 protein_coding processed_transcript MGP_129S1SvImJ_T0022610.1 MGP_129S1SvImJ_G0016582.1 mouse_genomes_project 1 156209829 156234611 - MGP_129S1SvImJ_P0022610 Rnf2 protein_coding protein_coding MGP_129S1SvImJ_T0019202.1 MGP_129S1SvImJ_G0015903.1 mouse_genomes_project 1 32113488 32125561 - MGP_129S1SvImJ_P0019202 Bag2 protein_coding protein_coding MGP_129S1SvImJ_T0019203.1 MGP_129S1SvImJ_G0015903.1 mouse_genomes_project 1 32114743 32116724 - Bag2 protein_coding retained_intron MGP_129S1SvImJ_T0019204.1 MGP_129S1SvImJ_G0015903.1 mouse_genomes_project 1 32114806 32125507 - MGP_129S1SvImJ_P0019204 Bag2 protein_coding protein_coding MGP_129S1SvImJ_T0019205.1 MGP_129S1SvImJ_G0015903.1 mouse_genomes_project 1 32124539 32125493 - Bag2 protein_coding retained_intron MGP_129S1SvImJ_T0021250.1 MGP_129S1SvImJ_G0016294.1 mouse_genomes_project 1 91680072 91692832 + MGP_129S1SvImJ_P0021250 Ackr3 protein_coding protein_coding MGP_129S1SvImJ_T0021251.1 MGP_129S1SvImJ_G0016294.1 mouse_genomes_project 1 91680098 91689926 + MGP_129S1SvImJ_P0021251 Ackr3 protein_coding protein_coding MGP_129S1SvImJ_T0100361.1 MGP_129S1SvImJ_G0038428.1 mouse_genomes_project 1 109685835 109685966 - Gm24553 snoRNA snoRNA MGP_129S1SvImJ_T0000575.1 MGP_129S1SvImJ_G0000514.1 mouse_genomes_project 1 88118518 88121517 + TEC TEC MGP_129S1SvImJ_T0099028.1 MGP_129S1SvImJ_G0037100.1 mouse_genomes_project 1 41642963 41692807 + Gm20646 sense_overlapping sense_overlapping MGP_129S1SvImJ_T0099029.1 MGP_129S1SvImJ_G0037100.1 mouse_genomes_project 1 41642963 41696630 + Gm20646 sense_overlapping sense_overlapping MGP_129S1SvImJ_T0012089.1 MGP_129S1SvImJ_G0010178.1 mouse_genomes_project 1 64019339 64020091 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022546.1 MGP_129S1SvImJ_G0016574.1 mouse_genomes_project 1 154967999 154984308 + MGP_129S1SvImJ_P0022546 Pdc protein_coding protein_coding MGP_129S1SvImJ_T0022547.1 MGP_129S1SvImJ_G0016574.1 mouse_genomes_project 1 154967999 154984307 + MGP_129S1SvImJ_P0022547 Pdc protein_coding protein_coding MGP_129S1SvImJ_T0022548.1 MGP_129S1SvImJ_G0016574.1 mouse_genomes_project 1 154968008 154983724 + MGP_129S1SvImJ_P0022548 Pdc protein_coding protein_coding MGP_129S1SvImJ_T0022549.1 MGP_129S1SvImJ_G0016574.1 mouse_genomes_project 1 154968011 154984305 + MGP_129S1SvImJ_P0022549 Pdc protein_coding protein_coding MGP_129S1SvImJ_T0005704.1 MGP_129S1SvImJ_G0004802.1 mouse_genomes_project 1 34506144 34506967 + 4930535G08Rik lincRNA lincRNA MGP_129S1SvImJ_T0000433.1 MGP_129S1SvImJ_G0000373.1 mouse_genomes_project 1 23186656 23190031 - TEC TEC MGP_129S1SvImJ_T0023816.1 MGP_129S1SvImJ_G0016860.1 mouse_genomes_project 1 185914099 185996800 + MGP_129S1SvImJ_P0023816 Cnst protein_coding protein_coding MGP_129S1SvImJ_T0023817.1 MGP_129S1SvImJ_G0016860.1 mouse_genomes_project 1 185914228 185950816 + Cnst protein_coding retained_intron MGP_129S1SvImJ_T0023818.1 MGP_129S1SvImJ_G0016860.1 mouse_genomes_project 1 185914238 185971997 + Cnst protein_coding retained_intron MGP_129S1SvImJ_T0023819.1 MGP_129S1SvImJ_G0016860.1 mouse_genomes_project 1 185962609 185974348 + Cnst protein_coding processed_transcript MGP_129S1SvImJ_T0019507.1 MGP_129S1SvImJ_G0015956.1 mouse_genomes_project 1 38102324 38105838 + MGP_129S1SvImJ_P0019507 Rpl31 protein_coding protein_coding MGP_129S1SvImJ_T0019508.1 MGP_129S1SvImJ_G0015956.1 mouse_genomes_project 1 38102595 38106402 + MGP_129S1SvImJ_P0019508 Rpl31 protein_coding protein_coding MGP_129S1SvImJ_T0019509.1 MGP_129S1SvImJ_G0015956.1 mouse_genomes_project 1 38104320 38105838 + Rpl31 protein_coding retained_intron MGP_129S1SvImJ_T0101596.1 MGP_129S1SvImJ_G0039649.1 mouse_genomes_project 1 189843716 189845225 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0023718.1 MGP_129S1SvImJ_G0016839.1 mouse_genomes_project 1 181783727 181789835 - MGP_129S1SvImJ_P0023718 Chml protein_coding protein_coding MGP_129S1SvImJ_T0000441.1 MGP_129S1SvImJ_G0000381.1 mouse_genomes_project 1 23574230 23579640 - TEC TEC MGP_129S1SvImJ_T0017017.1 MGP_129S1SvImJ_G0015095.1 mouse_genomes_project 1 41657288 41663646 - Pantr2 processed_transcript lincRNA MGP_129S1SvImJ_T0017018.1 MGP_129S1SvImJ_G0015095.1 mouse_genomes_project 1 41657299 41658280 - Pantr2 processed_transcript TEC MGP_129S1SvImJ_T0021458.1 MGP_129S1SvImJ_G0016339.1 mouse_genomes_project 1 94926776 94935416 - Pask protein_coding retained_intron MGP_129S1SvImJ_T0021459.1 MGP_129S1SvImJ_G0016339.1 mouse_genomes_project 1 94926784 94961739 - MGP_129S1SvImJ_P0021459 Pask protein_coding protein_coding MGP_129S1SvImJ_T0021460.1 MGP_129S1SvImJ_G0016339.1 mouse_genomes_project 1 94927844 94931156 - Pask protein_coding retained_intron MGP_129S1SvImJ_T0021461.1 MGP_129S1SvImJ_G0016339.1 mouse_genomes_project 1 94928091 94929351 - Pask protein_coding retained_intron MGP_129S1SvImJ_T0021462.1 MGP_129S1SvImJ_G0016339.1 mouse_genomes_project 1 94935830 94962415 - Pask protein_coding retained_intron MGP_129S1SvImJ_T0021463.1 MGP_129S1SvImJ_G0016339.1 mouse_genomes_project 1 94955464 94962432 - MGP_129S1SvImJ_P0021463 Pask protein_coding protein_coding MGP_129S1SvImJ_T0006057.1 MGP_129S1SvImJ_G0005072.1 mouse_genomes_project 1 192186165 192194702 - Gm2061 lincRNA lincRNA MGP_129S1SvImJ_T0000724.1 MGP_129S1SvImJ_G0000661.1 mouse_genomes_project 1 162392038 162393215 - TEC TEC MGP_129S1SvImJ_T0021847.1 MGP_129S1SvImJ_G0016422.1 mouse_genomes_project 1 130994008 131013446 + Ccnt2 protein_coding retained_intron MGP_129S1SvImJ_T0021848.1 MGP_129S1SvImJ_G0016422.1 mouse_genomes_project 1 130994008 131015657 + Ccnt2 protein_coding retained_intron MGP_129S1SvImJ_T0021849.1 MGP_129S1SvImJ_G0016422.1 mouse_genomes_project 1 130994008 131015657 + Ccnt2 protein_coding retained_intron MGP_129S1SvImJ_T0021850.1 MGP_129S1SvImJ_G0016422.1 mouse_genomes_project 1 130994008 131018287 + Ccnt2 protein_coding retained_intron MGP_129S1SvImJ_T0021851.1 MGP_129S1SvImJ_G0016422.1 mouse_genomes_project 1 130994008 131029396 + MGP_129S1SvImJ_P0021851 Ccnt2 protein_coding protein_coding MGP_129S1SvImJ_T0021852.1 MGP_129S1SvImJ_G0016422.1 mouse_genomes_project 1 130994008 131027267 + MGP_129S1SvImJ_P0021852 Ccnt2 protein_coding protein_coding MGP_129S1SvImJ_T0021853.1 MGP_129S1SvImJ_G0016422.1 mouse_genomes_project 1 131016457 131029396 + Ccnt2 protein_coding processed_transcript MGP_129S1SvImJ_T0018977.1 MGP_129S1SvImJ_G0015847.1 mouse_genomes_project 1 12326249 12375292 - MGP_129S1SvImJ_P0018977 Trpa1 protein_coding protein_coding MGP_129S1SvImJ_T0003017.1 MGP_129S1SvImJ_G0002828.1 mouse_genomes_project 1 199062504 199065802 - Gm26670 antisense antisense MGP_129S1SvImJ_T0100323.1 MGP_129S1SvImJ_G0038390.1 mouse_genomes_project 1 33635892 33636021 - Gm25096 snoRNA snoRNA MGP_129S1SvImJ_T0022868.1 MGP_129S1SvImJ_G0016632.1 mouse_genomes_project 1 162474801 162536099 + MGP_129S1SvImJ_P0022868 BC026585 protein_coding protein_coding MGP_129S1SvImJ_T0022869.1 MGP_129S1SvImJ_G0016632.1 mouse_genomes_project 1 162499474 162536216 + MGP_129S1SvImJ_P0022869 BC026585 protein_coding protein_coding MGP_129S1SvImJ_T0022870.1 MGP_129S1SvImJ_G0016632.1 mouse_genomes_project 1 162502876 162514110 + MGP_129S1SvImJ_P0022870 BC026585 protein_coding protein_coding MGP_129S1SvImJ_T0022871.1 MGP_129S1SvImJ_G0016632.1 mouse_genomes_project 1 162515691 162540226 + MGP_129S1SvImJ_P0022871 BC026585 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0017046.1 MGP_129S1SvImJ_G0015108.1 mouse_genomes_project 1 91395805 91397434 + D130058E05Rik processed_transcript antisense MGP_129S1SvImJ_T0017047.1 MGP_129S1SvImJ_G0015108.1 mouse_genomes_project 1 91395832 91398861 + D130058E05Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018800.1 MGP_129S1SvImJ_G0015820.1 mouse_genomes_project 1 3691039 4089820 + MGP_129S1SvImJ_P0018800 St18 protein_coding protein_coding MGP_129S1SvImJ_T0018801.1 MGP_129S1SvImJ_G0015820.1 mouse_genomes_project 1 3691139 4089826 + MGP_129S1SvImJ_P0018801 St18 protein_coding protein_coding MGP_129S1SvImJ_T0018802.1 MGP_129S1SvImJ_G0015820.1 mouse_genomes_project 1 3952579 4089826 + MGP_129S1SvImJ_P0018802 St18 protein_coding protein_coding MGP_129S1SvImJ_T0018803.1 MGP_129S1SvImJ_G0015820.1 mouse_genomes_project 1 3952581 4023335 + MGP_129S1SvImJ_P0018803 St18 protein_coding protein_coding MGP_129S1SvImJ_T0018804.1 MGP_129S1SvImJ_G0015820.1 mouse_genomes_project 1 3952598 4023460 + MGP_129S1SvImJ_P0018804 St18 protein_coding protein_coding MGP_129S1SvImJ_T0018805.1 MGP_129S1SvImJ_G0015820.1 mouse_genomes_project 1 3952629 4088356 + MGP_129S1SvImJ_P0018805 St18 protein_coding protein_coding MGP_129S1SvImJ_T0018806.1 MGP_129S1SvImJ_G0015820.1 mouse_genomes_project 1 3952630 4087699 + MGP_129S1SvImJ_P0018806 St18 protein_coding protein_coding MGP_129S1SvImJ_T0018807.1 MGP_129S1SvImJ_G0015820.1 mouse_genomes_project 1 3957395 4030580 + MGP_129S1SvImJ_P0018807 St18 protein_coding protein_coding MGP_129S1SvImJ_T0018808.1 MGP_129S1SvImJ_G0015820.1 mouse_genomes_project 1 3960100 4089826 + MGP_129S1SvImJ_P0018808 St18 protein_coding protein_coding MGP_129S1SvImJ_T0018809.1 MGP_129S1SvImJ_G0015820.1 mouse_genomes_project 1 4030682 4037276 + MGP_129S1SvImJ_P0018809 St18 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018810.1 MGP_129S1SvImJ_G0015820.1 mouse_genomes_project 1 4044528 4062448 + St18 protein_coding processed_transcript MGP_129S1SvImJ_T0018811.1 MGP_129S1SvImJ_G0015820.1 mouse_genomes_project 1 4056747 4077828 + St18 protein_coding processed_transcript MGP_129S1SvImJ_T0018812.1 MGP_129S1SvImJ_G0015820.1 mouse_genomes_project 1 4086220 4088490 + MGP_129S1SvImJ_P0018812 St18 protein_coding protein_coding MGP_129S1SvImJ_T0020589.1 MGP_129S1SvImJ_G0016161.1 mouse_genomes_project 1 75347216 75357218 - MGP_129S1SvImJ_P0020589 Prkag3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020590.1 MGP_129S1SvImJ_G0016161.1 mouse_genomes_project 1 75348491 75357484 - MGP_129S1SvImJ_P0020590 Prkag3 protein_coding protein_coding MGP_129S1SvImJ_T0020591.1 MGP_129S1SvImJ_G0016161.1 mouse_genomes_project 1 75348491 75356840 - MGP_129S1SvImJ_P0020591 Prkag3 protein_coding protein_coding MGP_129S1SvImJ_T0020592.1 MGP_129S1SvImJ_G0016161.1 mouse_genomes_project 1 75349753 75357130 - MGP_129S1SvImJ_P0020592 Prkag3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020593.1 MGP_129S1SvImJ_G0016161.1 mouse_genomes_project 1 75355780 75357167 - MGP_129S1SvImJ_P0020593 Prkag3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0002977.1 MGP_129S1SvImJ_G0002798.1 mouse_genomes_project 1 182904738 182909097 + Gm36992 antisense antisense MGP_129S1SvImJ_T0100358.1 MGP_129S1SvImJ_G0038425.1 mouse_genomes_project 1 104350293 104350392 - Gm23036 snoRNA snoRNA MGP_129S1SvImJ_T0021189.1 MGP_129S1SvImJ_G0016272.1 mouse_genomes_project 1 89338658 89370906 - MGP_129S1SvImJ_P0021189 Usp40 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021190.1 MGP_129S1SvImJ_G0016272.1 mouse_genomes_project 1 89338660 89403659 - MGP_129S1SvImJ_P0021190 Usp40 protein_coding protein_coding MGP_129S1SvImJ_T0021191.1 MGP_129S1SvImJ_G0016272.1 mouse_genomes_project 1 89339984 89403642 - MGP_129S1SvImJ_P0021191 Usp40 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021192.1 MGP_129S1SvImJ_G0016272.1 mouse_genomes_project 1 89339984 89403642 - MGP_129S1SvImJ_P0021192 Usp40 protein_coding protein_coding MGP_129S1SvImJ_T0021193.1 MGP_129S1SvImJ_G0016272.1 mouse_genomes_project 1 89343243 89345218 - Usp40 protein_coding retained_intron MGP_129S1SvImJ_T0021194.1 MGP_129S1SvImJ_G0016272.1 mouse_genomes_project 1 89359126 89361300 - Usp40 protein_coding retained_intron MGP_129S1SvImJ_T0021195.1 MGP_129S1SvImJ_G0016272.1 mouse_genomes_project 1 89380725 89403636 - Usp40 protein_coding retained_intron MGP_129S1SvImJ_T0021196.1 MGP_129S1SvImJ_G0016272.1 mouse_genomes_project 1 89401010 89403658 - Usp40 protein_coding retained_intron MGP_129S1SvImJ_T0021197.1 MGP_129S1SvImJ_G0016272.1 mouse_genomes_project 1 89401010 89403337 - Usp40 protein_coding retained_intron MGP_129S1SvImJ_T0019966.1 MGP_129S1SvImJ_G0016049.1 mouse_genomes_project 1 58252907 58270175 + MGP_129S1SvImJ_P0019966 Bzw1 protein_coding protein_coding MGP_129S1SvImJ_T0019967.1 MGP_129S1SvImJ_G0016049.1 mouse_genomes_project 1 58253067 58262954 + MGP_129S1SvImJ_P0019967 Bzw1 protein_coding protein_coding MGP_129S1SvImJ_T0019968.1 MGP_129S1SvImJ_G0016049.1 mouse_genomes_project 1 58253413 58267924 + MGP_129S1SvImJ_P0019968 Bzw1 protein_coding protein_coding MGP_129S1SvImJ_T0021443.1 MGP_129S1SvImJ_G0016335.1 mouse_genomes_project 1 94761066 94770667 - MGP_129S1SvImJ_P0021443 2310007B03Rik protein_coding protein_coding MGP_129S1SvImJ_T0021444.1 MGP_129S1SvImJ_G0016335.1 mouse_genomes_project 1 94761300 94770589 - MGP_129S1SvImJ_P0021444 2310007B03Rik protein_coding protein_coding MGP_129S1SvImJ_T0005935.1 MGP_129S1SvImJ_G0004980.1 mouse_genomes_project 1 140480118 140482671 - Platr23 lincRNA lincRNA MGP_129S1SvImJ_T0022241.1 MGP_129S1SvImJ_G0016510.1 mouse_genomes_project 1 138215764 138224504 - MGP_129S1SvImJ_P0022241 Mgat4e protein_coding protein_coding MGP_129S1SvImJ_T0022242.1 MGP_129S1SvImJ_G0016510.1 mouse_genomes_project 1 138215770 138221950 - MGP_129S1SvImJ_P0022242 Mgat4e protein_coding protein_coding MGP_129S1SvImJ_T0022243.1 MGP_129S1SvImJ_G0016510.1 mouse_genomes_project 1 138215780 138221878 - MGP_129S1SvImJ_P0022243 Mgat4e protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0012342.1 MGP_129S1SvImJ_G0010431.1 mouse_genomes_project 1 172740151 172740560 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005997.1 MGP_129S1SvImJ_G0005026.1 mouse_genomes_project 1 170519310 170523401 - 4930568G15Rik lincRNA lincRNA MGP_129S1SvImJ_T0005998.1 MGP_129S1SvImJ_G0005026.1 mouse_genomes_project 1 170521903 170550746 - 4930568G15Rik lincRNA lincRNA MGP_129S1SvImJ_T0000563.1 MGP_129S1SvImJ_G0000502.1 mouse_genomes_project 1 83728659 83729705 - TEC TEC MGP_129S1SvImJ_T0100384.1 MGP_129S1SvImJ_G0038451.1 mouse_genomes_project 1 166113563 166113684 - Gm24988 snoRNA snoRNA MGP_129S1SvImJ_T0012178.1 MGP_129S1SvImJ_G0010267.1 mouse_genomes_project 1 106375754 106376061 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011935.1 MGP_129S1SvImJ_G0010024.1 mouse_genomes_project 1 18446585 18447748 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000660.1 MGP_129S1SvImJ_G0000598.1 mouse_genomes_project 1 137455685 137457361 + TEC TEC MGP_129S1SvImJ_T0022431.1 MGP_129S1SvImJ_G0016547.1 mouse_genomes_project 1 142517494 142594145 - MGP_129S1SvImJ_P0022431 Nek7 protein_coding protein_coding MGP_129S1SvImJ_T0022432.1 MGP_129S1SvImJ_G0016547.1 mouse_genomes_project 1 142547012 142654865 - Nek7 protein_coding retained_intron MGP_129S1SvImJ_T0005736.1 MGP_129S1SvImJ_G0004819.1 mouse_genomes_project 1 42771931 42772543 + Gm29157 lincRNA lincRNA MGP_129S1SvImJ_T0019570.1 MGP_129S1SvImJ_G0015970.1 mouse_genomes_project 1 39376859 39435883 + MGP_129S1SvImJ_P0019570 Slc9a4 protein_coding protein_coding MGP_129S1SvImJ_T0019571.1 MGP_129S1SvImJ_G0015970.1 mouse_genomes_project 1 39376982 39382201 + Slc9a4 protein_coding processed_transcript MGP_129S1SvImJ_T0019572.1 MGP_129S1SvImJ_G0015970.1 mouse_genomes_project 1 39401964 39404239 + Slc9a4 protein_coding processed_transcript MGP_129S1SvImJ_T0019573.1 MGP_129S1SvImJ_G0015970.1 mouse_genomes_project 1 39434125 39435574 + Slc9a4 protein_coding retained_intron MGP_129S1SvImJ_T0002793.1 MGP_129S1SvImJ_G0002657.1 mouse_genomes_project 1 32985221 32985731 - 1700101I19Rik antisense antisense MGP_129S1SvImJ_T0002794.1 MGP_129S1SvImJ_G0002657.1 mouse_genomes_project 1 32985243 32985633 - 1700101I19Rik antisense antisense MGP_129S1SvImJ_T0005737.1 MGP_129S1SvImJ_G0004820.1 mouse_genomes_project 1 42774790 42775289 - Gm29156 lincRNA lincRNA MGP_129S1SvImJ_T0019184.1 MGP_129S1SvImJ_G0015900.1 mouse_genomes_project 1 30468515 30984087 + MGP_129S1SvImJ_P0019184 Khdrbs2 protein_coding protein_coding MGP_129S1SvImJ_T0019185.1 MGP_129S1SvImJ_G0015900.1 mouse_genomes_project 1 30468530 30551761 + MGP_129S1SvImJ_P0019185 Khdrbs2 protein_coding protein_coding MGP_129S1SvImJ_T0019186.1 MGP_129S1SvImJ_G0015900.1 mouse_genomes_project 1 30468549 30647841 + MGP_129S1SvImJ_P0019186 Khdrbs2 protein_coding protein_coding MGP_129S1SvImJ_T0019187.1 MGP_129S1SvImJ_G0015900.1 mouse_genomes_project 1 30468688 30622814 + MGP_129S1SvImJ_P0019187 Khdrbs2 protein_coding protein_coding MGP_129S1SvImJ_T0019188.1 MGP_129S1SvImJ_G0015900.1 mouse_genomes_project 1 30625990 30727705 + Khdrbs2 protein_coding processed_transcript MGP_129S1SvImJ_T0023597.1 MGP_129S1SvImJ_G0016789.1 mouse_genomes_project 1 178351028 178358801 + MGP_129S1SvImJ_P0023597 Igsf9 protein_coding protein_coding MGP_129S1SvImJ_T0023598.1 MGP_129S1SvImJ_G0016789.1 mouse_genomes_project 1 178351438 178360851 + MGP_129S1SvImJ_P0023598 Igsf9 protein_coding protein_coding MGP_129S1SvImJ_T0023599.1 MGP_129S1SvImJ_G0016789.1 mouse_genomes_project 1 178351445 178358838 + Igsf9 protein_coding processed_transcript MGP_129S1SvImJ_T0023600.1 MGP_129S1SvImJ_G0016789.1 mouse_genomes_project 1 178351454 178368081 + MGP_129S1SvImJ_P0023600 Igsf9 protein_coding protein_coding MGP_129S1SvImJ_T0023601.1 MGP_129S1SvImJ_G0016789.1 mouse_genomes_project 1 178351459 178359021 + Igsf9 protein_coding retained_intron MGP_129S1SvImJ_T0023602.1 MGP_129S1SvImJ_G0016789.1 mouse_genomes_project 1 178351459 178360252 + Igsf9 protein_coding retained_intron MGP_129S1SvImJ_T0023603.1 MGP_129S1SvImJ_G0016789.1 mouse_genomes_project 1 178351470 178368081 + MGP_129S1SvImJ_P0023603 Igsf9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023604.1 MGP_129S1SvImJ_G0016789.1 mouse_genomes_project 1 178351553 178368082 + MGP_129S1SvImJ_P0023604 Igsf9 protein_coding protein_coding MGP_129S1SvImJ_T0023605.1 MGP_129S1SvImJ_G0016789.1 mouse_genomes_project 1 178360296 178361190 + Igsf9 protein_coding retained_intron MGP_129S1SvImJ_T0023606.1 MGP_129S1SvImJ_G0016789.1 mouse_genomes_project 1 178361173 178364077 + MGP_129S1SvImJ_P0023606 Igsf9 protein_coding protein_coding MGP_129S1SvImJ_T0023607.1 MGP_129S1SvImJ_G0016789.1 mouse_genomes_project 1 178363144 178364939 + Igsf9 protein_coding retained_intron MGP_129S1SvImJ_T0023608.1 MGP_129S1SvImJ_G0016789.1 mouse_genomes_project 1 178363171 178364965 + Igsf9 protein_coding retained_intron MGP_129S1SvImJ_T0023609.1 MGP_129S1SvImJ_G0016789.1 mouse_genomes_project 1 178363969 178365427 + Igsf9 protein_coding retained_intron MGP_129S1SvImJ_T0023610.1 MGP_129S1SvImJ_G0016789.1 mouse_genomes_project 1 178366996 178367818 + Igsf9 protein_coding retained_intron MGP_129S1SvImJ_T0100338.1 MGP_129S1SvImJ_G0038405.1 mouse_genomes_project 1 59684323 59684404 + Gm26287 snoRNA snoRNA MGP_129S1SvImJ_T0019455.1 MGP_129S1SvImJ_G0015946.1 mouse_genomes_project 1 36597944 36600221 - Lyg1 protein_coding processed_transcript MGP_129S1SvImJ_T0019456.1 MGP_129S1SvImJ_G0015946.1 mouse_genomes_project 1 36597944 36610174 - MGP_129S1SvImJ_P0019456 Lyg1 protein_coding protein_coding MGP_129S1SvImJ_T0019457.1 MGP_129S1SvImJ_G0015946.1 mouse_genomes_project 1 36597946 36610174 - MGP_129S1SvImJ_P0019457 Lyg1 protein_coding protein_coding MGP_129S1SvImJ_T0022154.1 MGP_129S1SvImJ_G0016489.1 mouse_genomes_project 1 137212698 137261644 - MGP_129S1SvImJ_P0022154 Zc3h11a protein_coding protein_coding MGP_129S1SvImJ_T0022155.1 MGP_129S1SvImJ_G0016489.1 mouse_genomes_project 1 137212707 137261706 - MGP_129S1SvImJ_P0022155 Zc3h11a protein_coding protein_coding MGP_129S1SvImJ_T0022158.1 MGP_129S1SvImJ_G0016489.1 mouse_genomes_project 1 137219774 137222556 - Zc3h11a protein_coding processed_transcript MGP_129S1SvImJ_T0022159.1 MGP_129S1SvImJ_G0016489.1 mouse_genomes_project 1 137222453 137234514 - MGP_129S1SvImJ_P0022159 Zc3h11a protein_coding protein_coding MGP_129S1SvImJ_T0022160.1 MGP_129S1SvImJ_G0016489.1 mouse_genomes_project 1 137234227 137261704 - MGP_129S1SvImJ_P0022160 Zc3h11a protein_coding protein_coding MGP_129S1SvImJ_T0022161.1 MGP_129S1SvImJ_G0016489.1 mouse_genomes_project 1 137234485 137261684 - MGP_129S1SvImJ_P0022161 Zc3h11a protein_coding protein_coding MGP_129S1SvImJ_T0022162.1 MGP_129S1SvImJ_G0016489.1 mouse_genomes_project 1 137235601 137261686 - Zc3h11a protein_coding retained_intron MGP_129S1SvImJ_T0022163.1 MGP_129S1SvImJ_G0016489.1 mouse_genomes_project 1 137235892 137261608 - MGP_129S1SvImJ_P0022163 Zc3h11a protein_coding protein_coding MGP_129S1SvImJ_T0022164.1 MGP_129S1SvImJ_G0016489.1 mouse_genomes_project 1 137242371 137261622 - MGP_129S1SvImJ_P0022164 Zc3h11a protein_coding protein_coding MGP_129S1SvImJ_T0022165.1 MGP_129S1SvImJ_G0016489.1 mouse_genomes_project 1 137243807 137261607 - Zc3h11a protein_coding retained_intron MGP_129S1SvImJ_T0022166.1 MGP_129S1SvImJ_G0016489.1 mouse_genomes_project 1 137244060 137261694 - Zc3h11a protein_coding processed_transcript MGP_129S1SvImJ_T0022167.1 MGP_129S1SvImJ_G0016489.1 mouse_genomes_project 1 137252650 137261685 - Zc3h11a protein_coding processed_transcript MGP_129S1SvImJ_T0022168.1 MGP_129S1SvImJ_G0016489.1 mouse_genomes_project 1 137253929 137261706 - Zc3h11a protein_coding retained_intron MGP_129S1SvImJ_T0020996.1 MGP_129S1SvImJ_G0016234.1 mouse_genomes_project 1 86919038 86940831 - A630001G21Rik protein_coding processed_transcript MGP_129S1SvImJ_T0020997.1 MGP_129S1SvImJ_G0016234.1 mouse_genomes_project 1 86919038 86988666 - MGP_129S1SvImJ_P0020997 A630001G21Rik protein_coding protein_coding MGP_129S1SvImJ_T0020998.1 MGP_129S1SvImJ_G0016234.1 mouse_genomes_project 1 86919644 86940879 - MGP_129S1SvImJ_P0020998 A630001G21Rik protein_coding protein_coding MGP_129S1SvImJ_T0020999.1 MGP_129S1SvImJ_G0016234.1 mouse_genomes_project 1 86919647 86940831 - MGP_129S1SvImJ_P0020999 A630001G21Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021000.1 MGP_129S1SvImJ_G0016234.1 mouse_genomes_project 1 86920045 86940804 - A630001G21Rik protein_coding processed_transcript MGP_129S1SvImJ_T0021001.1 MGP_129S1SvImJ_G0016234.1 mouse_genomes_project 1 86928569 86940811 - A630001G21Rik protein_coding processed_transcript MGP_129S1SvImJ_T0012274.1 MGP_129S1SvImJ_G0010363.1 mouse_genomes_project 1 143180623 143181398 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020448.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74483267 74706427 - MGP_129S1SvImJ_P0020448 Tns1 protein_coding protein_coding MGP_129S1SvImJ_T0020449.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74483268 74706429 - MGP_129S1SvImJ_P0020449 Tns1 protein_coding protein_coding MGP_129S1SvImJ_T0020450.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74483268 74672827 - MGP_129S1SvImJ_P0020450 Tns1 protein_coding protein_coding MGP_129S1SvImJ_T0020451.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74486947 74501556 - MGP_129S1SvImJ_P0020451 Tns1 protein_coding protein_coding MGP_129S1SvImJ_T0020452.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74487129 74567572 - MGP_129S1SvImJ_P0020452 Tns1 protein_coding protein_coding MGP_129S1SvImJ_T0020453.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74487153 74567572 - MGP_129S1SvImJ_P0020453 Tns1 protein_coding protein_coding MGP_129S1SvImJ_T0020454.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74487566 74706427 - MGP_129S1SvImJ_P0020454 Tns1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0020455.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74498172 74514050 - MGP_129S1SvImJ_P0020455 Tns1 protein_coding protein_coding MGP_129S1SvImJ_T0020456.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74498459 74503854 - Tns1 protein_coding processed_transcript MGP_129S1SvImJ_T0020457.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74498459 74501260 - Tns1 protein_coding retained_intron MGP_129S1SvImJ_T0020458.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74498672 74503548 - Tns1 protein_coding processed_transcript MGP_129S1SvImJ_T0020459.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74526404 74536067 - MGP_129S1SvImJ_P0020459 Tns1 protein_coding protein_coding MGP_129S1SvImJ_T0020460.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74553208 74559463 - Tns1 protein_coding retained_intron MGP_129S1SvImJ_T0020461.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74561955 74572090 - Tns1 protein_coding retained_intron MGP_129S1SvImJ_T0020462.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74562607 74591191 - Tns1 protein_coding processed_transcript MGP_129S1SvImJ_T0020463.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74564333 74572090 - Tns1 protein_coding processed_transcript MGP_129S1SvImJ_T0020464.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74564438 74575161 - MGP_129S1SvImJ_P0020464 Tns1 protein_coding protein_coding MGP_129S1SvImJ_T0020465.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74565396 74616456 - MGP_129S1SvImJ_P0020465 Tns1 protein_coding protein_coding MGP_129S1SvImJ_T0020466.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74566999 74569895 - Tns1 protein_coding retained_intron MGP_129S1SvImJ_T0020467.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74567487 74678317 - MGP_129S1SvImJ_P0020467 Tns1 protein_coding protein_coding MGP_129S1SvImJ_T0020468.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74569254 74678360 - MGP_129S1SvImJ_P0020468 Tns1 protein_coding protein_coding MGP_129S1SvImJ_T0020469.1 MGP_129S1SvImJ_G0016139.1 mouse_genomes_project 1 74575910 74616480 - Tns1 protein_coding processed_transcript MGP_129S1SvImJ_T0022489.1 MGP_129S1SvImJ_G0016561.1 mouse_genomes_project 1 147991205 148006681 + MGP_129S1SvImJ_P0022489 B3galt2 protein_coding protein_coding MGP_129S1SvImJ_T0102092.1 MGP_129S1SvImJ_G0039927.1 mouse_genomes_project 1 178989129 178989429 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002985.1 MGP_129S1SvImJ_G0002805.1 mouse_genomes_project 1 187192878 187206435 - Gm37768 antisense antisense MGP_129S1SvImJ_T0000821.1 MGP_129S1SvImJ_G0000756.1 mouse_genomes_project 1 199900828 199902925 - TEC TEC MGP_129S1SvImJ_T0000822.1 MGP_129S1SvImJ_G0000756.1 mouse_genomes_project 1 199900879 199902430 - TEC TEC MGP_129S1SvImJ_T0005835.1 MGP_129S1SvImJ_G0004894.1 mouse_genomes_project 1 87197427 87213207 - Gm28100 lincRNA lincRNA MGP_129S1SvImJ_T0099078.1 MGP_129S1SvImJ_G0037145.1 mouse_genomes_project 1 47828413 47828534 - Gm23240 snRNA snRNA MGP_129S1SvImJ_T0019842.1 MGP_129S1SvImJ_G0016024.1 mouse_genomes_project 1 53933513 53955998 + Ccdc150 protein_coding retained_intron MGP_129S1SvImJ_T0019843.1 MGP_129S1SvImJ_G0016024.1 mouse_genomes_project 1 53933513 54045022 + MGP_129S1SvImJ_P0019843 Ccdc150 protein_coding protein_coding MGP_129S1SvImJ_T0019844.1 MGP_129S1SvImJ_G0016024.1 mouse_genomes_project 1 53933552 54044765 + MGP_129S1SvImJ_P0019844 Ccdc150 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019845.1 MGP_129S1SvImJ_G0016024.1 mouse_genomes_project 1 54008661 54044903 + Ccdc150 protein_coding processed_transcript MGP_129S1SvImJ_T0019846.1 MGP_129S1SvImJ_G0016024.1 mouse_genomes_project 1 54030922 54044898 + Ccdc150 protein_coding retained_intron MGP_129S1SvImJ_T0021447.1 MGP_129S1SvImJ_G0016337.1 mouse_genomes_project 1 94847994 94919084 + MGP_129S1SvImJ_P0021447 Sned1 protein_coding protein_coding MGP_129S1SvImJ_T0021448.1 MGP_129S1SvImJ_G0016337.1 mouse_genomes_project 1 94848004 94903124 + Sned1 protein_coding retained_intron MGP_129S1SvImJ_T0021449.1 MGP_129S1SvImJ_G0016337.1 mouse_genomes_project 1 94891710 94900933 + Sned1 protein_coding processed_transcript MGP_129S1SvImJ_T0021450.1 MGP_129S1SvImJ_G0016337.1 mouse_genomes_project 1 94899852 94913797 + MGP_129S1SvImJ_P0021450 Sned1 protein_coding protein_coding MGP_129S1SvImJ_T0021451.1 MGP_129S1SvImJ_G0016337.1 mouse_genomes_project 1 94905459 94914486 + Sned1 protein_coding retained_intron MGP_129S1SvImJ_T0021452.1 MGP_129S1SvImJ_G0016337.1 mouse_genomes_project 1 94913704 94914608 + Sned1 protein_coding retained_intron MGP_129S1SvImJ_T0000432.1 MGP_129S1SvImJ_G0000372.1 mouse_genomes_project 1 23173137 23174168 - TEC TEC MGP_129S1SvImJ_T0019706.1 MGP_129S1SvImJ_G0016000.1 mouse_genomes_project 1 46130221 46176481 - MGP_129S1SvImJ_P0019706 Slc39a10 protein_coding protein_coding MGP_129S1SvImJ_T0019707.1 MGP_129S1SvImJ_G0016000.1 mouse_genomes_project 1 46140277 46158562 - Slc39a10 protein_coding retained_intron MGP_129S1SvImJ_T0019708.1 MGP_129S1SvImJ_G0016000.1 mouse_genomes_project 1 46158302 46216229 - MGP_129S1SvImJ_P0019708 Slc39a10 protein_coding protein_coding MGP_129S1SvImJ_T0019709.1 MGP_129S1SvImJ_G0016000.1 mouse_genomes_project 1 46158400 46211450 - MGP_129S1SvImJ_P0019709 Slc39a10 protein_coding protein_coding MGP_129S1SvImJ_T0012157.1 MGP_129S1SvImJ_G0010246.1 mouse_genomes_project 1 94924702 94925248 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019482.1 MGP_129S1SvImJ_G0015950.1 mouse_genomes_project 1 36843513 37300859 - MGP_129S1SvImJ_P0019482 Aff3 protein_coding protein_coding MGP_129S1SvImJ_T0019483.1 MGP_129S1SvImJ_G0015950.1 mouse_genomes_project 1 36843514 37339104 - MGP_129S1SvImJ_P0019483 Aff3 protein_coding protein_coding MGP_129S1SvImJ_T0019484.1 MGP_129S1SvImJ_G0015950.1 mouse_genomes_project 1 36845636 37300815 - MGP_129S1SvImJ_P0019484 Aff3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0019485.1 MGP_129S1SvImJ_G0015950.1 mouse_genomes_project 1 36847449 36863913 - Aff3 protein_coding processed_transcript MGP_129S1SvImJ_T0019486.1 MGP_129S1SvImJ_G0015950.1 mouse_genomes_project 1 36997403 37339104 - Aff3 protein_coding processed_transcript MGP_129S1SvImJ_T0019487.1 MGP_129S1SvImJ_G0015950.1 mouse_genomes_project 1 37204111 37339104 - MGP_129S1SvImJ_P0019487 Aff3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0009576.1 MGP_129S1SvImJ_G0007692.1 mouse_genomes_project 1 197461766 197461854 - miRNA miRNA MGP_129S1SvImJ_T0000604.1 MGP_129S1SvImJ_G0000543.1 mouse_genomes_project 1 107008790 107011773 + TEC TEC MGP_129S1SvImJ_T0000573.1 MGP_129S1SvImJ_G0000512.1 mouse_genomes_project 1 87869858 87871033 + TEC TEC MGP_129S1SvImJ_T0020253.1 MGP_129S1SvImJ_G0016096.1 mouse_genomes_project 1 64783743 64794538 - MGP_129S1SvImJ_P0020253 Mettl21a protein_coding protein_coding MGP_129S1SvImJ_T0020254.1 MGP_129S1SvImJ_G0016096.1 mouse_genomes_project 1 64783750 64794464 - MGP_129S1SvImJ_P0020254 Mettl21a protein_coding protein_coding MGP_129S1SvImJ_T0020255.1 MGP_129S1SvImJ_G0016096.1 mouse_genomes_project 1 64785226 64792927 - Mettl21a protein_coding processed_transcript MGP_129S1SvImJ_T0020256.1 MGP_129S1SvImJ_G0016096.1 mouse_genomes_project 1 64791497 64794480 - Mettl21a protein_coding processed_transcript MGP_129S1SvImJ_T0099144.1 MGP_129S1SvImJ_G0037211.1 mouse_genomes_project 1 184947555 184947722 + Gm24405 snRNA snRNA MGP_129S1SvImJ_T0099030.1 MGP_129S1SvImJ_G0037101.1 mouse_genomes_project 1 107483325 107509103 - sense_overlapping sense_overlapping MGP_129S1SvImJ_T0012341.1 MGP_129S1SvImJ_G0010430.1 mouse_genomes_project 1 172325515 172325827 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024229.1 MGP_129S1SvImJ_G0016942.1 mouse_genomes_project 1 198340863 198352020 - MGP_129S1SvImJ_P0024229 Nenf protein_coding protein_coding MGP_129S1SvImJ_T0005818.1 MGP_129S1SvImJ_G0004881.1 mouse_genomes_project 1 78188964 78190814 + Gm28386 lincRNA lincRNA MGP_129S1SvImJ_T0023643.1 MGP_129S1SvImJ_G0016804.1 mouse_genomes_project 1 179193261 179194252 + MGP_129S1SvImJ_P0023643 Olfr418 protein_coding protein_coding MGP_129S1SvImJ_T0024178.1 MGP_129S1SvImJ_G0016932.1 mouse_genomes_project 1 197697163 197921558 - MGP_129S1SvImJ_P0024178 Rps6kc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024179.1 MGP_129S1SvImJ_G0016932.1 mouse_genomes_project 1 197774738 197839554 - MGP_129S1SvImJ_P0024179 Rps6kc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024180.1 MGP_129S1SvImJ_G0016932.1 mouse_genomes_project 1 197774738 197921581 - MGP_129S1SvImJ_P0024180 Rps6kc1 protein_coding protein_coding MGP_129S1SvImJ_T0024181.1 MGP_129S1SvImJ_G0016932.1 mouse_genomes_project 1 197774738 197921549 - MGP_129S1SvImJ_P0024181 Rps6kc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024182.1 MGP_129S1SvImJ_G0016932.1 mouse_genomes_project 1 197799453 197850346 - Rps6kc1 protein_coding retained_intron MGP_129S1SvImJ_T0024183.1 MGP_129S1SvImJ_G0016932.1 mouse_genomes_project 1 197801832 197921545 - Rps6kc1 protein_coding retained_intron MGP_129S1SvImJ_T0024184.1 MGP_129S1SvImJ_G0016932.1 mouse_genomes_project 1 197814364 197815940 - Rps6kc1 protein_coding retained_intron MGP_129S1SvImJ_T0024185.1 MGP_129S1SvImJ_G0016932.1 mouse_genomes_project 1 197877831 197908715 - Rps6kc1 protein_coding processed_transcript MGP_129S1SvImJ_T0024186.1 MGP_129S1SvImJ_G0016932.1 mouse_genomes_project 1 197891279 197921580 - MGP_129S1SvImJ_P0024186 Rps6kc1 protein_coding protein_coding MGP_129S1SvImJ_T0000499.1 MGP_129S1SvImJ_G0000438.1 mouse_genomes_project 1 54427572 54428982 - TEC TEC MGP_129S1SvImJ_T0099148.1 MGP_129S1SvImJ_G0037215.1 mouse_genomes_project 1 195630538 195630642 + Gm25269 snRNA snRNA MGP_129S1SvImJ_T0000542.1 MGP_129S1SvImJ_G0000481.1 mouse_genomes_project 1 73764473 73767009 - TEC TEC MGP_129S1SvImJ_T0099072.1 MGP_129S1SvImJ_G0037139.1 mouse_genomes_project 1 31548129 31548239 + Gm24901 snRNA snRNA MGP_129S1SvImJ_T0023167.1 MGP_129S1SvImJ_G0016692.1 mouse_genomes_project 1 170810761 170946726 - MGP_129S1SvImJ_P0023167 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0023168.1 MGP_129S1SvImJ_G0016692.1 mouse_genomes_project 1 170811442 170838381 - protein_coding retained_intron MGP_129S1SvImJ_T0023169.1 MGP_129S1SvImJ_G0016692.1 mouse_genomes_project 1 170837440 170889850 - MGP_129S1SvImJ_P0023169 protein_coding protein_coding MGP_129S1SvImJ_T0023170.1 MGP_129S1SvImJ_G0016692.1 mouse_genomes_project 1 170837870 170889865 - MGP_129S1SvImJ_P0023170 protein_coding protein_coding MGP_129S1SvImJ_T0023171.1 MGP_129S1SvImJ_G0016692.1 mouse_genomes_project 1 170852668 170946974 - protein_coding processed_transcript MGP_129S1SvImJ_T0012235.1 MGP_129S1SvImJ_G0010324.1 mouse_genomes_project 1 124485120 124485303 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098286.1 MGP_129S1SvImJ_G0036371.1 mouse_genomes_project 1 122275800 122277600 + pseudogene pseudogene MGP_129S1SvImJ_T0000464.1 MGP_129S1SvImJ_G0000403.1 mouse_genomes_project 1 32264545 32266168 - TEC TEC MGP_129S1SvImJ_T0000465.1 MGP_129S1SvImJ_G0000404.1 mouse_genomes_project 1 32298998 32301547 + TEC TEC MGP_129S1SvImJ_T0000670.1 MGP_129S1SvImJ_G0000608.1 mouse_genomes_project 1 141266752 141267161 - TEC TEC MGP_129S1SvImJ_T0011871.1 MGP_129S1SvImJ_G0009960.1 mouse_genomes_project 1 1638333 1639269 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019940.1 MGP_129S1SvImJ_G0016043.1 mouse_genomes_project 1 57787710 57802694 - MGP_129S1SvImJ_P0019940 Kctd18 protein_coding protein_coding MGP_129S1SvImJ_T0019941.1 MGP_129S1SvImJ_G0016043.1 mouse_genomes_project 1 57787857 57802738 - MGP_129S1SvImJ_P0019941 Kctd18 protein_coding protein_coding MGP_129S1SvImJ_T0019942.1 MGP_129S1SvImJ_G0016043.1 mouse_genomes_project 1 57787862 57802134 - MGP_129S1SvImJ_P0019942 Kctd18 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019943.1 MGP_129S1SvImJ_G0016043.1 mouse_genomes_project 1 57788681 57852411 - MGP_129S1SvImJ_P0019943 Kctd18 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019944.1 MGP_129S1SvImJ_G0016043.1 mouse_genomes_project 1 57789189 57802658 - MGP_129S1SvImJ_P0019944 Kctd18 protein_coding protein_coding MGP_129S1SvImJ_T0019945.1 MGP_129S1SvImJ_G0016043.1 mouse_genomes_project 1 57789301 57796057 - Kctd18 protein_coding retained_intron MGP_129S1SvImJ_T0019946.1 MGP_129S1SvImJ_G0016043.1 mouse_genomes_project 1 57789329 57794712 - Kctd18 protein_coding retained_intron MGP_129S1SvImJ_T0019947.1 MGP_129S1SvImJ_G0016043.1 mouse_genomes_project 1 57792663 57802662 - Kctd18 protein_coding retained_intron MGP_129S1SvImJ_T0019948.1 MGP_129S1SvImJ_G0016043.1 mouse_genomes_project 1 57793767 57795591 - Kctd18 protein_coding retained_intron MGP_129S1SvImJ_T0019949.1 MGP_129S1SvImJ_G0016043.1 mouse_genomes_project 1 57796175 57802689 - Kctd18 protein_coding retained_intron MGP_129S1SvImJ_T0019950.1 MGP_129S1SvImJ_G0016043.1 mouse_genomes_project 1 57796211 57802689 - Kctd18 protein_coding retained_intron MGP_129S1SvImJ_T0019652.1 MGP_129S1SvImJ_G0015988.1 mouse_genomes_project 1 43159555 43168134 + MGP_129S1SvImJ_P0019652 protein_coding protein_coding MGP_129S1SvImJ_T0019653.1 MGP_129S1SvImJ_G0015988.1 mouse_genomes_project 1 43159598 43167898 + protein_coding processed_transcript MGP_129S1SvImJ_T0019654.1 MGP_129S1SvImJ_G0015988.1 mouse_genomes_project 1 43160106 43167915 + protein_coding processed_transcript MGP_129S1SvImJ_T0019655.1 MGP_129S1SvImJ_G0015988.1 mouse_genomes_project 1 43160241 43187361 + MGP_129S1SvImJ_P0019655 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0019656.1 MGP_129S1SvImJ_G0015988.1 mouse_genomes_project 1 43160575 43167975 + MGP_129S1SvImJ_P0019656 protein_coding protein_coding MGP_129S1SvImJ_T0012073.1 MGP_129S1SvImJ_G0010162.1 mouse_genomes_project 1 60870644 60872044 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024335.1 MGP_129S1SvImJ_G0016961.1 mouse_genomes_project 1 200296459 200298922 + Lamb3 protein_coding retained_intron MGP_129S1SvImJ_T0024336.1 MGP_129S1SvImJ_G0016961.1 mouse_genomes_project 1 200296485 200441270 + MGP_129S1SvImJ_P0024336 Lamb3 protein_coding protein_coding MGP_129S1SvImJ_T0024337.1 MGP_129S1SvImJ_G0016961.1 mouse_genomes_project 1 200296492 200421986 + MGP_129S1SvImJ_P0024337 Lamb3 protein_coding protein_coding MGP_129S1SvImJ_T0024346.1 MGP_129S1SvImJ_G0016961.1 mouse_genomes_project 1 200369391 200376635 + Lamb3 protein_coding processed_transcript MGP_129S1SvImJ_T0024347.1 MGP_129S1SvImJ_G0016961.1 mouse_genomes_project 1 200397994 200441270 + MGP_129S1SvImJ_P0024347 Lamb3 protein_coding protein_coding MGP_129S1SvImJ_T0024348.1 MGP_129S1SvImJ_G0016961.1 mouse_genomes_project 1 200398222 200399422 + Lamb3 protein_coding processed_transcript MGP_129S1SvImJ_T0024349.1 MGP_129S1SvImJ_G0016961.1 mouse_genomes_project 1 200398244 200441267 + MGP_129S1SvImJ_P0024349 Lamb3 protein_coding protein_coding MGP_129S1SvImJ_T0024350.1 MGP_129S1SvImJ_G0016961.1 mouse_genomes_project 1 200416688 200421985 + Lamb3 protein_coding processed_transcript MGP_129S1SvImJ_T0102078.1 MGP_129S1SvImJ_G0039913.1 mouse_genomes_project 1 109503509 109522309 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0000421.1 MGP_129S1SvImJ_G0000363.1 mouse_genomes_project 1 17234180 17236726 + TEC TEC MGP_129S1SvImJ_T0012123.1 MGP_129S1SvImJ_G0010212.1 mouse_genomes_project 1 80278521 80279880 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005932.1 MGP_129S1SvImJ_G0004977.1 mouse_genomes_project 1 140387728 140405063 + Gm37799 lincRNA lincRNA MGP_129S1SvImJ_T0000510.1 MGP_129S1SvImJ_G0000449.1 mouse_genomes_project 1 59959684 59965099 + TEC TEC MGP_129S1SvImJ_T0019501.1 MGP_129S1SvImJ_G0015954.1 mouse_genomes_project 1 37692731 37700859 + MGP_129S1SvImJ_P0019501 Pdcl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019502.1 MGP_129S1SvImJ_G0015954.1 mouse_genomes_project 1 37692734 37702225 + MGP_129S1SvImJ_P0019502 Pdcl3 protein_coding protein_coding MGP_129S1SvImJ_T0019503.1 MGP_129S1SvImJ_G0015954.1 mouse_genomes_project 1 37701101 37702588 + Pdcl3 protein_coding retained_intron MGP_129S1SvImJ_T0002815.1 MGP_129S1SvImJ_G0002674.1 mouse_genomes_project 1 39585925 39602189 + Gm37915 antisense antisense MGP_129S1SvImJ_T0021403.1 MGP_129S1SvImJ_G0016329.1 mouse_genomes_project 1 94516019 94527775 + MGP_129S1SvImJ_P0021403 Rnpepl1 protein_coding protein_coding MGP_129S1SvImJ_T0021404.1 MGP_129S1SvImJ_G0016329.1 mouse_genomes_project 1 94516061 94527506 + Rnpepl1 protein_coding retained_intron MGP_129S1SvImJ_T0021405.1 MGP_129S1SvImJ_G0016329.1 mouse_genomes_project 1 94516089 94518645 + Rnpepl1 protein_coding retained_intron MGP_129S1SvImJ_T0021406.1 MGP_129S1SvImJ_G0016329.1 mouse_genomes_project 1 94516357 94523671 + MGP_129S1SvImJ_P0021406 Rnpepl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021407.1 MGP_129S1SvImJ_G0016329.1 mouse_genomes_project 1 94516445 94522867 + MGP_129S1SvImJ_P0021407 Rnpepl1 protein_coding protein_coding MGP_129S1SvImJ_T0021408.1 MGP_129S1SvImJ_G0016329.1 mouse_genomes_project 1 94522777 94527506 + Rnpepl1 protein_coding retained_intron MGP_129S1SvImJ_T0021409.1 MGP_129S1SvImJ_G0016329.1 mouse_genomes_project 1 94523724 94527506 + MGP_129S1SvImJ_P0021409 Rnpepl1 protein_coding protein_coding MGP_129S1SvImJ_T0021410.1 MGP_129S1SvImJ_G0016329.1 mouse_genomes_project 1 94523738 94526150 + Rnpepl1 protein_coding retained_intron MGP_129S1SvImJ_T0021411.1 MGP_129S1SvImJ_G0016329.1 mouse_genomes_project 1 94523945 94525007 + Rnpepl1 protein_coding retained_intron MGP_129S1SvImJ_T0021412.1 MGP_129S1SvImJ_G0016329.1 mouse_genomes_project 1 94524080 94525999 + MGP_129S1SvImJ_P0021412 Rnpepl1 protein_coding protein_coding MGP_129S1SvImJ_T0021413.1 MGP_129S1SvImJ_G0016329.1 mouse_genomes_project 1 94524349 94526151 + Rnpepl1 protein_coding retained_intron MGP_129S1SvImJ_T0021414.1 MGP_129S1SvImJ_G0016329.1 mouse_genomes_project 1 94526547 94531319 + MGP_129S1SvImJ_P0021414 Rnpepl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021116.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88677318 88707136 + Gigyf2 protein_coding processed_transcript MGP_129S1SvImJ_T0021117.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88677323 88813018 + MGP_129S1SvImJ_P0021117 Gigyf2 protein_coding protein_coding MGP_129S1SvImJ_T0021118.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88677349 88811366 + MGP_129S1SvImJ_P0021118 Gigyf2 protein_coding protein_coding MGP_129S1SvImJ_T0021119.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88677350 88709195 + Gigyf2 protein_coding processed_transcript MGP_129S1SvImJ_T0021120.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88677353 88780567 + MGP_129S1SvImJ_P0021120 Gigyf2 protein_coding protein_coding MGP_129S1SvImJ_T0021121.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88677366 88679328 + Gigyf2 protein_coding retained_intron MGP_129S1SvImJ_T0021122.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88677368 88744420 + Gigyf2 protein_coding processed_transcript MGP_129S1SvImJ_T0021123.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88677386 88790235 + MGP_129S1SvImJ_P0021123 Gigyf2 protein_coding protein_coding MGP_129S1SvImJ_T0021124.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88705859 88811366 + MGP_129S1SvImJ_P0021124 Gigyf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021125.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88705859 88811366 + MGP_129S1SvImJ_P0021125 Gigyf2 protein_coding protein_coding MGP_129S1SvImJ_T0021126.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88716340 88732504 + Gigyf2 protein_coding retained_intron MGP_129S1SvImJ_T0021127.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88716700 88718195 + Gigyf2 protein_coding retained_intron MGP_129S1SvImJ_T0021128.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88739853 88760831 + Gigyf2 protein_coding processed_transcript MGP_129S1SvImJ_T0021129.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88739874 88760562 + MGP_129S1SvImJ_P0021129 Gigyf2 protein_coding protein_coding MGP_129S1SvImJ_T0021132.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88757189 88804278 + MGP_129S1SvImJ_P0021132 Gigyf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021133.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88757248 88761220 + MGP_129S1SvImJ_P0021133 Gigyf2 protein_coding protein_coding MGP_129S1SvImJ_T0021134.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88758434 88761130 + MGP_129S1SvImJ_P0021134 Gigyf2 protein_coding protein_coding MGP_129S1SvImJ_T0021135.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88758466 88764221 + MGP_129S1SvImJ_P0021135 Gigyf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021136.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88758482 88760885 + MGP_129S1SvImJ_P0021136 Gigyf2 protein_coding protein_coding MGP_129S1SvImJ_T0021137.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88760897 88773848 + MGP_129S1SvImJ_P0021137 Gigyf2 protein_coding protein_coding MGP_129S1SvImJ_T0021138.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88789555 88813018 + Gigyf2 protein_coding processed_transcript MGP_129S1SvImJ_T0021139.1 MGP_129S1SvImJ_G0016263.1 mouse_genomes_project 1 88805572 88811429 + Gigyf2 protein_coding retained_intron MGP_129S1SvImJ_T0023331.1 MGP_129S1SvImJ_G0016728.1 mouse_genomes_project 1 175967399 175979195 + MGP_129S1SvImJ_P0023331 Sh2d1b1 protein_coding protein_coding MGP_129S1SvImJ_T0020557.1 MGP_129S1SvImJ_G0016157.1 mouse_genomes_project 1 75204200 75215284 - MGP_129S1SvImJ_P0020557 Rnf25 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020558.1 MGP_129S1SvImJ_G0016157.1 mouse_genomes_project 1 75204200 75215309 - MGP_129S1SvImJ_P0020558 Rnf25 protein_coding protein_coding MGP_129S1SvImJ_T0020559.1 MGP_129S1SvImJ_G0016157.1 mouse_genomes_project 1 75204205 75215289 - MGP_129S1SvImJ_P0020559 Rnf25 protein_coding protein_coding MGP_129S1SvImJ_T0020560.1 MGP_129S1SvImJ_G0016157.1 mouse_genomes_project 1 75204674 75205254 - Rnf25 protein_coding retained_intron MGP_129S1SvImJ_T0020561.1 MGP_129S1SvImJ_G0016157.1 mouse_genomes_project 1 75205661 75214476 - MGP_129S1SvImJ_P0020561 Rnf25 protein_coding protein_coding MGP_129S1SvImJ_T0020562.1 MGP_129S1SvImJ_G0016157.1 mouse_genomes_project 1 75206337 75214511 - MGP_129S1SvImJ_P0020562 Rnf25 protein_coding protein_coding MGP_129S1SvImJ_T0020563.1 MGP_129S1SvImJ_G0016157.1 mouse_genomes_project 1 75212252 75215257 - MGP_129S1SvImJ_P0020563 Rnf25 protein_coding protein_coding MGP_129S1SvImJ_T0020564.1 MGP_129S1SvImJ_G0016157.1 mouse_genomes_project 1 75212439 75215306 - Rnf25 protein_coding retained_intron MGP_129S1SvImJ_T0020565.1 MGP_129S1SvImJ_G0016157.1 mouse_genomes_project 1 75212622 75215277 - MGP_129S1SvImJ_P0020565 Rnf25 protein_coding protein_coding MGP_129S1SvImJ_T0005838.1 MGP_129S1SvImJ_G0004897.1 mouse_genomes_project 1 89868311 89887221 - Gm29538 lincRNA lincRNA MGP_129S1SvImJ_T0000683.1 MGP_129S1SvImJ_G0000620.1 mouse_genomes_project 1 142600082 142603742 - TEC TEC MGP_129S1SvImJ_T0012172.1 MGP_129S1SvImJ_G0010261.1 mouse_genomes_project 1 102565213 102565568 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000594.1 MGP_129S1SvImJ_G0000533.1 mouse_genomes_project 1 95158603 95160990 + TEC TEC MGP_129S1SvImJ_T0006019.1 MGP_129S1SvImJ_G0005046.1 mouse_genomes_project 1 183839973 183841375 - 2310043L19Rik lincRNA lincRNA MGP_129S1SvImJ_T0002944.1 MGP_129S1SvImJ_G0002772.1 mouse_genomes_project 1 165460339 165640822 + Gm36975 antisense antisense MGP_129S1SvImJ_T0005706.1 MGP_129S1SvImJ_G0004804.1 mouse_genomes_project 1 34855406 34856122 + 4930403P22Rik lincRNA lincRNA MGP_129S1SvImJ_T0006068.1 MGP_129S1SvImJ_G0005081.1 mouse_genomes_project 1 197392570 197418399 - Gm30725 lincRNA lincRNA MGP_129S1SvImJ_T0102093.1 MGP_129S1SvImJ_G0039928.1 mouse_genomes_project 1 179009703 179009955 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0020655.1 MGP_129S1SvImJ_G0016176.1 mouse_genomes_project 1 75755544 75758321 + Ankzf1 protein_coding retained_intron MGP_129S1SvImJ_T0020656.1 MGP_129S1SvImJ_G0016176.1 mouse_genomes_project 1 75755553 75758771 + Ankzf1 protein_coding retained_intron MGP_129S1SvImJ_T0020657.1 MGP_129S1SvImJ_G0016176.1 mouse_genomes_project 1 75755553 75762624 + Ankzf1 protein_coding retained_intron MGP_129S1SvImJ_T0020658.1 MGP_129S1SvImJ_G0016176.1 mouse_genomes_project 1 75755553 75762624 + Ankzf1 protein_coding retained_intron MGP_129S1SvImJ_T0020659.1 MGP_129S1SvImJ_G0016176.1 mouse_genomes_project 1 75755553 75762624 + MGP_129S1SvImJ_P0020659 Ankzf1 protein_coding protein_coding MGP_129S1SvImJ_T0020660.1 MGP_129S1SvImJ_G0016176.1 mouse_genomes_project 1 75755553 75762624 + MGP_129S1SvImJ_P0020660 Ankzf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020661.1 MGP_129S1SvImJ_G0016176.1 mouse_genomes_project 1 75755585 75758771 + MGP_129S1SvImJ_P0020661 Ankzf1 protein_coding protein_coding MGP_129S1SvImJ_T0020662.1 MGP_129S1SvImJ_G0016176.1 mouse_genomes_project 1 75758929 75759893 + Ankzf1 protein_coding retained_intron MGP_129S1SvImJ_T0012007.1 MGP_129S1SvImJ_G0010096.1 mouse_genomes_project 1 43254706 43255794 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023006.1 MGP_129S1SvImJ_G0016655.1 mouse_genomes_project 1 167125429 167186705 - MGP_129S1SvImJ_P0023006 Suco protein_coding protein_coding MGP_129S1SvImJ_T0023007.1 MGP_129S1SvImJ_G0016655.1 mouse_genomes_project 1 167129687 167132010 - Suco protein_coding retained_intron MGP_129S1SvImJ_T0023008.1 MGP_129S1SvImJ_G0016655.1 mouse_genomes_project 1 167137651 167138806 - Suco protein_coding retained_intron MGP_129S1SvImJ_T0023009.1 MGP_129S1SvImJ_G0016655.1 mouse_genomes_project 1 167144648 167154278 - Suco protein_coding processed_transcript MGP_129S1SvImJ_T0023010.1 MGP_129S1SvImJ_G0016655.1 mouse_genomes_project 1 167148272 167153839 - Suco protein_coding retained_intron MGP_129S1SvImJ_T0023011.1 MGP_129S1SvImJ_G0016655.1 mouse_genomes_project 1 167154332 167163277 - MGP_129S1SvImJ_P0023011 Suco protein_coding protein_coding MGP_129S1SvImJ_T0023012.1 MGP_129S1SvImJ_G0016655.1 mouse_genomes_project 1 167162362 167167599 - MGP_129S1SvImJ_P0023012 Suco protein_coding protein_coding MGP_129S1SvImJ_T0000813.1 MGP_129S1SvImJ_G0000748.1 mouse_genomes_project 1 195008957 195011394 + TEC TEC MGP_129S1SvImJ_T0018870.1 MGP_129S1SvImJ_G0015832.1 mouse_genomes_project 1 7289430 7304077 - MGP_129S1SvImJ_P0018870 Cops5 protein_coding protein_coding MGP_129S1SvImJ_T0018871.1 MGP_129S1SvImJ_G0015832.1 mouse_genomes_project 1 7289672 7301079 - MGP_129S1SvImJ_P0018871 Cops5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018872.1 MGP_129S1SvImJ_G0015832.1 mouse_genomes_project 1 7292027 7303891 - MGP_129S1SvImJ_P0018872 Cops5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018873.1 MGP_129S1SvImJ_G0015832.1 mouse_genomes_project 1 7295509 7304099 - MGP_129S1SvImJ_P0018873 Cops5 protein_coding protein_coding MGP_129S1SvImJ_T0018874.1 MGP_129S1SvImJ_G0015832.1 mouse_genomes_project 1 7295740 7303888 - Cops5 protein_coding retained_intron MGP_129S1SvImJ_T0018875.1 MGP_129S1SvImJ_G0015832.1 mouse_genomes_project 1 7298989 7304118 - Cops5 protein_coding retained_intron MGP_129S1SvImJ_T0018876.1 MGP_129S1SvImJ_G0015832.1 mouse_genomes_project 1 7303229 7303895 - Cops5 protein_coding retained_intron MGP_129S1SvImJ_T0022485.1 MGP_129S1SvImJ_G0016560.1 mouse_genomes_project 1 147941555 148057804 - MGP_129S1SvImJ_P0022485 Cdc73 protein_coding protein_coding MGP_129S1SvImJ_T0022486.1 MGP_129S1SvImJ_G0016560.1 mouse_genomes_project 1 147948928 147991123 - Cdc73 protein_coding processed_transcript MGP_129S1SvImJ_T0022487.1 MGP_129S1SvImJ_G0016560.1 mouse_genomes_project 1 147981430 147984157 - Cdc73 protein_coding retained_intron MGP_129S1SvImJ_T0022488.1 MGP_129S1SvImJ_G0016560.1 mouse_genomes_project 1 147990010 147992904 - Cdc73 protein_coding retained_intron MGP_129S1SvImJ_T0022490.1 MGP_129S1SvImJ_G0016560.1 mouse_genomes_project 1 148046150 148057112 - MGP_129S1SvImJ_P0022490 Cdc73 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0005921.1 MGP_129S1SvImJ_G0004966.1 mouse_genomes_project 1 135668816 135671486 - 1700037F24Rik lincRNA lincRNA MGP_129S1SvImJ_T0024111.1 MGP_129S1SvImJ_G0016922.1 mouse_genomes_project 1 193853234 194018711 - MGP_129S1SvImJ_P0024111 Spata17 protein_coding protein_coding MGP_129S1SvImJ_T0024112.1 MGP_129S1SvImJ_G0016922.1 mouse_genomes_project 1 193857001 194018692 - MGP_129S1SvImJ_P0024112 Spata17 protein_coding protein_coding MGP_129S1SvImJ_T0024113.1 MGP_129S1SvImJ_G0016922.1 mouse_genomes_project 1 193915624 193946402 - MGP_129S1SvImJ_P0024113 Spata17 protein_coding protein_coding MGP_129S1SvImJ_T0024114.1 MGP_129S1SvImJ_G0016922.1 mouse_genomes_project 1 193920425 194018683 - MGP_129S1SvImJ_P0024114 Spata17 protein_coding protein_coding MGP_129S1SvImJ_T0024115.1 MGP_129S1SvImJ_G0016922.1 mouse_genomes_project 1 193938846 193946595 - MGP_129S1SvImJ_P0024115 Spata17 protein_coding protein_coding MGP_129S1SvImJ_T0024116.1 MGP_129S1SvImJ_G0016922.1 mouse_genomes_project 1 193938846 194018667 - MGP_129S1SvImJ_P0024116 Spata17 protein_coding protein_coding MGP_129S1SvImJ_T0024117.1 MGP_129S1SvImJ_G0016922.1 mouse_genomes_project 1 193938853 193946582 - Spata17 protein_coding processed_transcript MGP_129S1SvImJ_T0024118.1 MGP_129S1SvImJ_G0016922.1 mouse_genomes_project 1 193995422 194018692 - Spata17 protein_coding processed_transcript MGP_129S1SvImJ_T0012120.1 MGP_129S1SvImJ_G0010209.1 mouse_genomes_project 1 76237395 76238199 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023259.1 MGP_129S1SvImJ_G0016709.1 mouse_genomes_project 1 172540207 172634375 + MGP_129S1SvImJ_P0023259 Fam78b protein_coding protein_coding MGP_129S1SvImJ_T0023260.1 MGP_129S1SvImJ_G0016709.1 mouse_genomes_project 1 172540207 172634375 + MGP_129S1SvImJ_P0023260 Fam78b protein_coding protein_coding MGP_129S1SvImJ_T0023261.1 MGP_129S1SvImJ_G0016709.1 mouse_genomes_project 1 172540222 172632150 + MGP_129S1SvImJ_P0023261 Fam78b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023262.1 MGP_129S1SvImJ_G0016709.1 mouse_genomes_project 1 172540256 172624199 + MGP_129S1SvImJ_P0023262 Fam78b protein_coding protein_coding MGP_129S1SvImJ_T0023263.1 MGP_129S1SvImJ_G0016709.1 mouse_genomes_project 1 172540370 172631797 + MGP_129S1SvImJ_P0023263 Fam78b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023264.1 MGP_129S1SvImJ_G0016709.1 mouse_genomes_project 1 172540379 172634082 + MGP_129S1SvImJ_P0023264 Fam78b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021939.1 MGP_129S1SvImJ_G0016442.1 mouse_genomes_project 1 134228229 134256793 + MGP_129S1SvImJ_P0021939 Pigr protein_coding protein_coding MGP_129S1SvImJ_T0021940.1 MGP_129S1SvImJ_G0016442.1 mouse_genomes_project 1 134228433 134249245 + MGP_129S1SvImJ_P0021940 Pigr protein_coding protein_coding MGP_129S1SvImJ_T0021941.1 MGP_129S1SvImJ_G0016442.1 mouse_genomes_project 1 134230555 134249213 + MGP_129S1SvImJ_P0021941 Pigr protein_coding protein_coding MGP_129S1SvImJ_T0018911.1 MGP_129S1SvImJ_G0015835.1 mouse_genomes_project 1 7631010 8031522 - MGP_129S1SvImJ_P0018911 Cpa6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018912.1 MGP_129S1SvImJ_G0015835.1 mouse_genomes_project 1 7631017 8031522 - MGP_129S1SvImJ_P0018912 Cpa6 protein_coding protein_coding MGP_129S1SvImJ_T0018913.1 MGP_129S1SvImJ_G0015835.1 mouse_genomes_project 1 7769022 7774021 - Cpa6 protein_coding retained_intron MGP_129S1SvImJ_T0018914.1 MGP_129S1SvImJ_G0015835.1 mouse_genomes_project 1 7890972 8031482 - Cpa6 protein_coding processed_transcript MGP_129S1SvImJ_T0021201.1 MGP_129S1SvImJ_G0016274.1 mouse_genomes_project 1 89466459 89628377 + MGP_129S1SvImJ_P0021201 Ugt1a9 protein_coding protein_coding MGP_129S1SvImJ_T0002898.1 MGP_129S1SvImJ_G0002736.1 mouse_genomes_project 1 133851262 133952893 + antisense antisense MGP_129S1SvImJ_T0000772.1 MGP_129S1SvImJ_G0000709.1 mouse_genomes_project 1 182511609 182515171 - TEC TEC MGP_129S1SvImJ_T0020741.1 MGP_129S1SvImJ_G0016186.1 mouse_genomes_project 1 75943144 76004986 + MGP_129S1SvImJ_P0020741 Speg protein_coding protein_coding MGP_129S1SvImJ_T0020742.1 MGP_129S1SvImJ_G0016186.1 mouse_genomes_project 1 75951214 75973667 + MGP_129S1SvImJ_P0020742 Speg protein_coding protein_coding MGP_129S1SvImJ_T0020743.1 MGP_129S1SvImJ_G0016186.1 mouse_genomes_project 1 75951214 75957413 + MGP_129S1SvImJ_P0020743 Speg protein_coding protein_coding MGP_129S1SvImJ_T0020744.1 MGP_129S1SvImJ_G0016186.1 mouse_genomes_project 1 75951226 75952486 + Speg protein_coding retained_intron MGP_129S1SvImJ_T0020745.1 MGP_129S1SvImJ_G0016186.1 mouse_genomes_project 1 75951238 75956963 + MGP_129S1SvImJ_P0020745 Speg protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020746.1 MGP_129S1SvImJ_G0016186.1 mouse_genomes_project 1 75952659 75954045 + Speg protein_coding processed_transcript MGP_129S1SvImJ_T0020747.1 MGP_129S1SvImJ_G0016186.1 mouse_genomes_project 1 75953769 75957016 + Speg protein_coding retained_intron MGP_129S1SvImJ_T0020748.1 MGP_129S1SvImJ_G0016186.1 mouse_genomes_project 1 75953897 75961003 + MGP_129S1SvImJ_P0020748 Speg protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020749.1 MGP_129S1SvImJ_G0016186.1 mouse_genomes_project 1 75954580 75958172 + Speg protein_coding processed_transcript MGP_129S1SvImJ_T0020750.1 MGP_129S1SvImJ_G0016186.1 mouse_genomes_project 1 75954678 76004971 + MGP_129S1SvImJ_P0020750 Speg protein_coding protein_coding MGP_129S1SvImJ_T0020751.1 MGP_129S1SvImJ_G0016186.1 mouse_genomes_project 1 75969206 75973094 + MGP_129S1SvImJ_P0020751 Speg protein_coding protein_coding MGP_129S1SvImJ_T0020752.1 MGP_129S1SvImJ_G0016186.1 mouse_genomes_project 1 75969642 75973474 + MGP_129S1SvImJ_P0020752 Speg protein_coding protein_coding MGP_129S1SvImJ_T0020753.1 MGP_129S1SvImJ_G0016186.1 mouse_genomes_project 1 75969756 75973666 + MGP_129S1SvImJ_P0020753 Speg protein_coding protein_coding MGP_129S1SvImJ_T0020754.1 MGP_129S1SvImJ_G0016186.1 mouse_genomes_project 1 75970131 75973311 + MGP_129S1SvImJ_P0020754 Speg protein_coding protein_coding MGP_129S1SvImJ_T0020755.1 MGP_129S1SvImJ_G0016186.1 mouse_genomes_project 1 75994188 76000286 + Speg protein_coding retained_intron MGP_129S1SvImJ_T0099061.1 MGP_129S1SvImJ_G0037128.1 mouse_genomes_project 1 7085760 7085865 - Gm22607 snRNA snRNA MGP_129S1SvImJ_T0099090.1 MGP_129S1SvImJ_G0037157.1 mouse_genomes_project 1 68690413 68690507 - Gm25542 snRNA snRNA MGP_129S1SvImJ_T0012231.1 MGP_129S1SvImJ_G0010320.1 mouse_genomes_project 1 122756287 122756807 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012093.1 MGP_129S1SvImJ_G0010182.1 mouse_genomes_project 1 65216811 65217464 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005840.1 MGP_129S1SvImJ_G0004899.1 mouse_genomes_project 1 89975845 89987830 + Gm19589 lincRNA lincRNA MGP_129S1SvImJ_T0005982.1 MGP_129S1SvImJ_G0005014.1 mouse_genomes_project 1 166076540 166077004 + Gm38060 lincRNA lincRNA MGP_129S1SvImJ_T0012331.1 MGP_129S1SvImJ_G0010420.1 mouse_genomes_project 1 169442856 169443245 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021529.1 MGP_129S1SvImJ_G0016350.1 mouse_genomes_project 1 95451912 95470025 + MGP_129S1SvImJ_P0021529 Ing5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021530.1 MGP_129S1SvImJ_G0016350.1 mouse_genomes_project 1 95451932 95470030 + MGP_129S1SvImJ_P0021530 Ing5 protein_coding protein_coding MGP_129S1SvImJ_T0009579.1 MGP_129S1SvImJ_G0007695.1 mouse_genomes_project 1 201985616 201985680 + Mir3962 miRNA miRNA MGP_129S1SvImJ_T0003019.1 MGP_129S1SvImJ_G0002830.1 mouse_genomes_project 1 199170277 199186931 + Gm10516 antisense antisense MGP_129S1SvImJ_T0003020.1 MGP_129S1SvImJ_G0002830.1 mouse_genomes_project 1 199170726 199179600 + Gm10516 antisense antisense MGP_129S1SvImJ_T0012247.1 MGP_129S1SvImJ_G0010336.1 mouse_genomes_project 1 130217612 130218377 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021140.1 MGP_129S1SvImJ_G0016265.1 mouse_genomes_project 1 88828199 88833412 + MGP_129S1SvImJ_P0021140 3110079O15Rik protein_coding protein_coding MGP_129S1SvImJ_T0021141.1 MGP_129S1SvImJ_G0016265.1 mouse_genomes_project 1 88830467 88833388 + 3110079O15Rik protein_coding processed_transcript MGP_129S1SvImJ_T0000698.1 MGP_129S1SvImJ_G0000635.1 mouse_genomes_project 1 152024703 152030022 + TEC TEC MGP_129S1SvImJ_T0012297.1 MGP_129S1SvImJ_G0010386.1 mouse_genomes_project 1 154790667 154791269 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019125.1 MGP_129S1SvImJ_G0015888.1 mouse_genomes_project 1 21846444 21862345 - MGP_129S1SvImJ_P0019125 Fam135a protein_coding protein_coding MGP_129S1SvImJ_T0019126.1 MGP_129S1SvImJ_G0015888.1 mouse_genomes_project 1 21846444 21918603 - MGP_129S1SvImJ_P0019126 Fam135a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019127.1 MGP_129S1SvImJ_G0015888.1 mouse_genomes_project 1 21846596 21935607 - MGP_129S1SvImJ_P0019127 Fam135a protein_coding protein_coding MGP_129S1SvImJ_T0019128.1 MGP_129S1SvImJ_G0015888.1 mouse_genomes_project 1 21846942 21935595 - MGP_129S1SvImJ_P0019128 Fam135a protein_coding protein_coding MGP_129S1SvImJ_T0019129.1 MGP_129S1SvImJ_G0015888.1 mouse_genomes_project 1 21846955 21864672 - MGP_129S1SvImJ_P0019129 Fam135a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019130.1 MGP_129S1SvImJ_G0015888.1 mouse_genomes_project 1 21847032 21935746 - MGP_129S1SvImJ_P0019130 Fam135a protein_coding protein_coding MGP_129S1SvImJ_T0019131.1 MGP_129S1SvImJ_G0015888.1 mouse_genomes_project 1 21859860 21864036 - MGP_129S1SvImJ_P0019131 Fam135a protein_coding protein_coding MGP_129S1SvImJ_T0019132.1 MGP_129S1SvImJ_G0015888.1 mouse_genomes_project 1 21864307 21935629 - MGP_129S1SvImJ_P0019132 Fam135a protein_coding protein_coding MGP_129S1SvImJ_T0019133.1 MGP_129S1SvImJ_G0015888.1 mouse_genomes_project 1 21886769 21935754 - Fam135a protein_coding retained_intron MGP_129S1SvImJ_T0002922.1 MGP_129S1SvImJ_G0002754.1 mouse_genomes_project 1 140076122 140091121 + Gm26781 antisense antisense MGP_129S1SvImJ_T0011899.1 MGP_129S1SvImJ_G0009988.1 mouse_genomes_project 1 6603935 6605852 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021453.1 MGP_129S1SvImJ_G0016338.1 mouse_genomes_project 1 94917219 94923872 - MGP_129S1SvImJ_P0021453 Mterf4 protein_coding protein_coding MGP_129S1SvImJ_T0021454.1 MGP_129S1SvImJ_G0016338.1 mouse_genomes_project 1 94919223 94923924 - MGP_129S1SvImJ_P0021454 Mterf4 protein_coding protein_coding MGP_129S1SvImJ_T0021455.1 MGP_129S1SvImJ_G0016338.1 mouse_genomes_project 1 94919446 94920912 - Mterf4 protein_coding processed_transcript MGP_129S1SvImJ_T0021456.1 MGP_129S1SvImJ_G0016338.1 mouse_genomes_project 1 94919935 94923873 - MGP_129S1SvImJ_P0021456 Mterf4 protein_coding protein_coding MGP_129S1SvImJ_T0021457.1 MGP_129S1SvImJ_G0016338.1 mouse_genomes_project 1 94921507 94923888 - Mterf4 protein_coding retained_intron MGP_129S1SvImJ_T0009493.1 MGP_129S1SvImJ_G0007609.1 mouse_genomes_project 1 35207939 35208014 + Gm24133 miRNA miRNA MGP_129S1SvImJ_T0102090.1 MGP_129S1SvImJ_G0039925.1 mouse_genomes_project 1 177333764 177336325 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102041.1 MGP_129S1SvImJ_G0039876.1 mouse_genomes_project 1 15581642 15592437 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0017053.1 MGP_129S1SvImJ_G0015110.1 mouse_genomes_project 1 135414784 135475374 + Gm29103 processed_transcript processed_transcript MGP_129S1SvImJ_T0023635.1 MGP_129S1SvImJ_G0016799.1 mouse_genomes_project 1 179039724 179040761 - MGP_129S1SvImJ_P0023635 Olfr1408 protein_coding protein_coding MGP_129S1SvImJ_T0023636.1 MGP_129S1SvImJ_G0016799.1 mouse_genomes_project 1 179039724 179047774 - MGP_129S1SvImJ_P0023636 Olfr1408 protein_coding protein_coding MGP_129S1SvImJ_T0009504.1 MGP_129S1SvImJ_G0007620.1 mouse_genomes_project 1 63302233 63302320 + Gm24557 miRNA miRNA MGP_129S1SvImJ_T0099112.1 MGP_129S1SvImJ_G0037179.1 mouse_genomes_project 1 131776725 131776830 - Gm25384 snRNA snRNA MGP_129S1SvImJ_T0002905.1 MGP_129S1SvImJ_G0002741.1 mouse_genomes_project 1 135605934 135609231 + Gm29629 antisense antisense MGP_129S1SvImJ_T0000715.1 MGP_129S1SvImJ_G0000652.1 mouse_genomes_project 1 160927637 160928842 + TEC TEC MGP_129S1SvImJ_T0021774.1 MGP_129S1SvImJ_G0016406.1 mouse_genomes_project 1 123141570 123144161 + MGP_129S1SvImJ_P0021774 C1ql2 protein_coding protein_coding MGP_129S1SvImJ_T0005720.1 MGP_129S1SvImJ_G0004814.1 mouse_genomes_project 1 41176754 41177153 + lincRNA lincRNA MGP_129S1SvImJ_T0020506.1 MGP_129S1SvImJ_G0016149.1 mouse_genomes_project 1 74972147 74984152 + MGP_129S1SvImJ_P0020506 Slc11a1 protein_coding protein_coding MGP_129S1SvImJ_T0020507.1 MGP_129S1SvImJ_G0016149.1 mouse_genomes_project 1 74972155 74984449 + Slc11a1 protein_coding retained_intron MGP_129S1SvImJ_T0020508.1 MGP_129S1SvImJ_G0016149.1 mouse_genomes_project 1 74972155 74984459 + MGP_129S1SvImJ_P0020508 Slc11a1 protein_coding protein_coding MGP_129S1SvImJ_T0020509.1 MGP_129S1SvImJ_G0016149.1 mouse_genomes_project 1 74972177 74984448 + Slc11a1 protein_coding retained_intron MGP_129S1SvImJ_T0020510.1 MGP_129S1SvImJ_G0016149.1 mouse_genomes_project 1 74972205 74980310 + Slc11a1 protein_coding processed_transcript MGP_129S1SvImJ_T0020511.1 MGP_129S1SvImJ_G0016149.1 mouse_genomes_project 1 74972524 74973843 + Slc11a1 protein_coding processed_transcript MGP_129S1SvImJ_T0020512.1 MGP_129S1SvImJ_G0016149.1 mouse_genomes_project 1 74973609 74976784 + Slc11a1 protein_coding processed_transcript MGP_129S1SvImJ_T0020513.1 MGP_129S1SvImJ_G0016149.1 mouse_genomes_project 1 74980134 74982570 + Slc11a1 protein_coding retained_intron MGP_129S1SvImJ_T0020514.1 MGP_129S1SvImJ_G0016149.1 mouse_genomes_project 1 74981430 74982231 + Slc11a1 protein_coding retained_intron MGP_129S1SvImJ_T0020515.1 MGP_129S1SvImJ_G0016149.1 mouse_genomes_project 1 74981737 74982570 + Slc11a1 protein_coding processed_transcript MGP_129S1SvImJ_T0020516.1 MGP_129S1SvImJ_G0016149.1 mouse_genomes_project 1 74981996 74983594 + Slc11a1 protein_coding processed_transcript MGP_129S1SvImJ_T0005734.1 MGP_129S1SvImJ_G0004817.1 mouse_genomes_project 1 41702566 41704736 + Dalir lincRNA lincRNA MGP_129S1SvImJ_T0012129.1 MGP_129S1SvImJ_G0010218.1 mouse_genomes_project 1 82622614 82624895 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098771.1 MGP_129S1SvImJ_G0036856.1 mouse_genomes_project 1 640928 655005 - Gm19938 sense_intronic sense_intronic MGP_129S1SvImJ_T0021956.1 MGP_129S1SvImJ_G0016447.1 mouse_genomes_project 1 134426826 134431958 + MGP_129S1SvImJ_P0021956 Il10 protein_coding protein_coding MGP_129S1SvImJ_T0100350.1 MGP_129S1SvImJ_G0038417.1 mouse_genomes_project 1 87605254 87605387 - Snora75 snoRNA snoRNA MGP_129S1SvImJ_T0009536.1 MGP_129S1SvImJ_G0007652.1 mouse_genomes_project 1 107674513 107674609 + Gm22426 miRNA miRNA MGP_129S1SvImJ_T0019602.1 MGP_129S1SvImJ_G0015978.1 mouse_genomes_project 1 42065789 42083015 + MGP_129S1SvImJ_P0019602 AI597479 protein_coding protein_coding MGP_129S1SvImJ_T0021142.1 MGP_129S1SvImJ_G0016266.1 mouse_genomes_project 1 88836739 88872500 - MGP_129S1SvImJ_P0021142 Ngef protein_coding protein_coding MGP_129S1SvImJ_T0021143.1 MGP_129S1SvImJ_G0016266.1 mouse_genomes_project 1 88836739 88942519 - MGP_129S1SvImJ_P0021143 Ngef protein_coding protein_coding MGP_129S1SvImJ_T0021144.1 MGP_129S1SvImJ_G0016266.1 mouse_genomes_project 1 88838590 88846084 - MGP_129S1SvImJ_P0021144 Ngef protein_coding protein_coding MGP_129S1SvImJ_T0021145.1 MGP_129S1SvImJ_G0016266.1 mouse_genomes_project 1 88839634 88846124 - Ngef protein_coding retained_intron MGP_129S1SvImJ_T0009524.1 MGP_129S1SvImJ_G0007640.1 mouse_genomes_project 1 86970456 86970534 + Gm25472 miRNA miRNA MGP_129S1SvImJ_T0023345.1 MGP_129S1SvImJ_G0016734.1 mouse_genomes_project 1 176618613 176632679 - MGP_129S1SvImJ_P0023345 Dusp12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023346.1 MGP_129S1SvImJ_G0016734.1 mouse_genomes_project 1 176619298 176632617 - MGP_129S1SvImJ_P0023346 Dusp12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023347.1 MGP_129S1SvImJ_G0016734.1 mouse_genomes_project 1 176619298 176632421 - MGP_129S1SvImJ_P0023347 Dusp12 protein_coding protein_coding MGP_129S1SvImJ_T0023348.1 MGP_129S1SvImJ_G0016734.1 mouse_genomes_project 1 176619298 176632762 - MGP_129S1SvImJ_P0023348 Dusp12 protein_coding protein_coding MGP_129S1SvImJ_T0023349.1 MGP_129S1SvImJ_G0016734.1 mouse_genomes_project 1 176619299 176632629 - MGP_129S1SvImJ_P0023349 Dusp12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023350.1 MGP_129S1SvImJ_G0016734.1 mouse_genomes_project 1 176619630 176632618 - MGP_129S1SvImJ_P0023350 Dusp12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023351.1 MGP_129S1SvImJ_G0016734.1 mouse_genomes_project 1 176626611 176632226 - MGP_129S1SvImJ_P0023351 Dusp12 protein_coding protein_coding MGP_129S1SvImJ_T0022660.1 MGP_129S1SvImJ_G0016594.1 mouse_genomes_project 1 157917319 157991328 - MGP_129S1SvImJ_P0022660 Lamc2 protein_coding protein_coding MGP_129S1SvImJ_T0022661.1 MGP_129S1SvImJ_G0016594.1 mouse_genomes_project 1 157917319 157990928 - MGP_129S1SvImJ_P0022661 Lamc2 protein_coding protein_coding MGP_129S1SvImJ_T0022662.1 MGP_129S1SvImJ_G0016594.1 mouse_genomes_project 1 157918736 157921798 - Lamc2 protein_coding retained_intron MGP_129S1SvImJ_T0022663.1 MGP_129S1SvImJ_G0016594.1 mouse_genomes_project 1 157920661 157923566 - MGP_129S1SvImJ_P0022663 Lamc2 protein_coding protein_coding MGP_129S1SvImJ_T0022664.1 MGP_129S1SvImJ_G0016594.1 mouse_genomes_project 1 157949300 157951193 - Lamc2 protein_coding retained_intron MGP_129S1SvImJ_T0022665.1 MGP_129S1SvImJ_G0016594.1 mouse_genomes_project 1 157956419 157991328 - Lamc2 protein_coding retained_intron MGP_129S1SvImJ_T0012121.1 MGP_129S1SvImJ_G0010210.1 mouse_genomes_project 1 76731898 76732298 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018753.1 MGP_129S1SvImJ_G0015811.1 mouse_genomes_project 1 1844952 1888864 + MGP_129S1SvImJ_P0018753 Lypla1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018754.1 MGP_129S1SvImJ_G0015811.1 mouse_genomes_project 1 1844987 1886845 + MGP_129S1SvImJ_P0018754 Lypla1 protein_coding protein_coding MGP_129S1SvImJ_T0018755.1 MGP_129S1SvImJ_G0015811.1 mouse_genomes_project 1 1844994 1881392 + MGP_129S1SvImJ_P0018755 Lypla1 protein_coding protein_coding MGP_129S1SvImJ_T0018757.1 MGP_129S1SvImJ_G0015811.1 mouse_genomes_project 1 1845060 1885280 + MGP_129S1SvImJ_P0018757 Lypla1 protein_coding protein_coding MGP_129S1SvImJ_T0018758.1 MGP_129S1SvImJ_G0015811.1 mouse_genomes_project 1 1845062 1881075 + MGP_129S1SvImJ_P0018758 Lypla1 protein_coding protein_coding MGP_129S1SvImJ_T0018759.1 MGP_129S1SvImJ_G0015811.1 mouse_genomes_project 1 1845075 1885458 + MGP_129S1SvImJ_P0018759 Lypla1 protein_coding protein_coding MGP_129S1SvImJ_T0018760.1 MGP_129S1SvImJ_G0015811.1 mouse_genomes_project 1 1845105 1886846 + MGP_129S1SvImJ_P0018760 Lypla1 protein_coding protein_coding MGP_129S1SvImJ_T0018761.1 MGP_129S1SvImJ_G0015811.1 mouse_genomes_project 1 1877010 1882933 + Lypla1 protein_coding retained_intron MGP_129S1SvImJ_T0019051.1 MGP_129S1SvImJ_G0015865.1 mouse_genomes_project 1 15824762 15825733 - MGP_129S1SvImJ_P0019051 Defb18 protein_coding protein_coding MGP_129S1SvImJ_T0009527.1 MGP_129S1SvImJ_G0007643.1 mouse_genomes_project 1 89408602 89408712 + Gm25198 miRNA miRNA MGP_129S1SvImJ_T0000786.1 MGP_129S1SvImJ_G0000722.1 mouse_genomes_project 1 186426940 186429479 + TEC TEC MGP_129S1SvImJ_T0011931.1 MGP_129S1SvImJ_G0010020.1 mouse_genomes_project 1 16661132 16661411 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019524.1 MGP_129S1SvImJ_G0015961.1 mouse_genomes_project 1 38426553 38484095 - MGP_129S1SvImJ_P0019524 Rfx8 protein_coding protein_coding MGP_129S1SvImJ_T0019525.1 MGP_129S1SvImJ_G0015961.1 mouse_genomes_project 1 38442142 38453146 - Rfx8 protein_coding processed_transcript MGP_129S1SvImJ_T0000632.1 MGP_129S1SvImJ_G0000571.1 mouse_genomes_project 1 129193978 129195300 - TEC TEC MGP_129S1SvImJ_T0002781.1 MGP_129S1SvImJ_G0002647.1 mouse_genomes_project 1 14551907 14604108 + antisense antisense MGP_129S1SvImJ_T0019180.1 MGP_129S1SvImJ_G0015898.1 mouse_genomes_project 1 29409812 29446341 + MGP_129S1SvImJ_P0019180 Lgsn protein_coding protein_coding MGP_129S1SvImJ_T0019181.1 MGP_129S1SvImJ_G0015898.1 mouse_genomes_project 1 29428164 29446341 + MGP_129S1SvImJ_P0019181 Lgsn protein_coding protein_coding MGP_129S1SvImJ_T0000512.1 MGP_129S1SvImJ_G0000451.1 mouse_genomes_project 1 60681631 60683061 - TEC TEC MGP_129S1SvImJ_T0011921.1 MGP_129S1SvImJ_G0010010.1 mouse_genomes_project 1 14279483 14279902 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019141.1 MGP_129S1SvImJ_G0015891.1 mouse_genomes_project 1 22544588 22576695 + MGP_129S1SvImJ_P0019141 Lmbrd1 protein_coding protein_coding MGP_129S1SvImJ_T0019142.1 MGP_129S1SvImJ_G0015891.1 mouse_genomes_project 1 22544667 22600708 + MGP_129S1SvImJ_P0019142 Lmbrd1 protein_coding protein_coding MGP_129S1SvImJ_T0019143.1 MGP_129S1SvImJ_G0015891.1 mouse_genomes_project 1 22544685 22636424 + MGP_129S1SvImJ_P0019143 Lmbrd1 protein_coding protein_coding MGP_129S1SvImJ_T0019144.1 MGP_129S1SvImJ_G0015891.1 mouse_genomes_project 1 22597455 22614049 + Lmbrd1 protein_coding retained_intron MGP_129S1SvImJ_T0019145.1 MGP_129S1SvImJ_G0015891.1 mouse_genomes_project 1 22613973 22632535 + MGP_129S1SvImJ_P0019145 Lmbrd1 protein_coding protein_coding MGP_129S1SvImJ_T0005698.1 MGP_129S1SvImJ_G0004797.1 mouse_genomes_project 1 34102879 34130880 - Gm37068 lincRNA lincRNA MGP_129S1SvImJ_T0019030.1 MGP_129S1SvImJ_G0015858.1 mouse_genomes_project 1 14177840 14191447 + MGP_129S1SvImJ_P0019030 Tmem70 protein_coding protein_coding MGP_129S1SvImJ_T0019031.1 MGP_129S1SvImJ_G0015858.1 mouse_genomes_project 1 14177843 14190467 + Tmem70 protein_coding processed_transcript MGP_129S1SvImJ_T0019032.1 MGP_129S1SvImJ_G0015858.1 mouse_genomes_project 1 14177843 14191527 + MGP_129S1SvImJ_P0019032 Tmem70 protein_coding protein_coding MGP_129S1SvImJ_T0019033.1 MGP_129S1SvImJ_G0015858.1 mouse_genomes_project 1 14177869 14178445 + Tmem70 protein_coding processed_transcript MGP_129S1SvImJ_T0023670.1 MGP_129S1SvImJ_G0016817.1 mouse_genomes_project 1 179959458 180046403 - MGP_129S1SvImJ_P0023670 Ifi202b protein_coding protein_coding MGP_129S1SvImJ_T0023536.1 MGP_129S1SvImJ_G0016775.1 mouse_genomes_project 1 177899959 177905219 - MGP_129S1SvImJ_P0023536 Nhlh1 protein_coding protein_coding MGP_129S1SvImJ_T0023740.1 MGP_129S1SvImJ_G0016844.1 mouse_genomes_project 1 182085524 182088242 - MGP_129S1SvImJ_P0023740 Rbm8a2 protein_coding protein_coding MGP_129S1SvImJ_T0005919.1 MGP_129S1SvImJ_G0004964.1 mouse_genomes_project 1 134161884 134184662 + Gm28856 lincRNA lincRNA MGP_129S1SvImJ_T0000759.1 MGP_129S1SvImJ_G0000696.1 mouse_genomes_project 1 171972319 171973225 - TEC TEC MGP_129S1SvImJ_T0020981.1 MGP_129S1SvImJ_G0016229.1 mouse_genomes_project 1 85885422 85951167 + MGP_129S1SvImJ_P0020981 Fbxo36 protein_coding protein_coding MGP_129S1SvImJ_T0020982.1 MGP_129S1SvImJ_G0016229.1 mouse_genomes_project 1 85885434 85951167 + Fbxo36 protein_coding processed_transcript MGP_129S1SvImJ_T0020983.1 MGP_129S1SvImJ_G0016229.1 mouse_genomes_project 1 85913428 85951167 + Fbxo36 protein_coding processed_transcript MGP_129S1SvImJ_T0020984.1 MGP_129S1SvImJ_G0016229.1 mouse_genomes_project 1 85916147 85951167 + Fbxo36 protein_coding processed_transcript MGP_129S1SvImJ_T0023982.1 MGP_129S1SvImJ_G0016890.1 mouse_genomes_project 1 188742259 188751006 + MGP_129S1SvImJ_P0023982 Srp9 protein_coding protein_coding MGP_129S1SvImJ_T0023983.1 MGP_129S1SvImJ_G0016890.1 mouse_genomes_project 1 188742272 188751494 + MGP_129S1SvImJ_P0023983 Srp9 protein_coding protein_coding MGP_129S1SvImJ_T0023984.1 MGP_129S1SvImJ_G0016890.1 mouse_genomes_project 1 188742303 188747593 + Srp9 protein_coding retained_intron MGP_129S1SvImJ_T0023985.1 MGP_129S1SvImJ_G0016890.1 mouse_genomes_project 1 188749837 188750892 + Srp9 protein_coding retained_intron MGP_129S1SvImJ_T0100319.1 MGP_129S1SvImJ_G0038386.1 mouse_genomes_project 1 21021834 21021955 + Gm24176 snoRNA snoRNA MGP_129S1SvImJ_T0012390.1 MGP_129S1SvImJ_G0010479.1 mouse_genomes_project 1 198860899 198861231 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002858.1 MGP_129S1SvImJ_G0002704.1 mouse_genomes_project 1 75838878 75841926 + Gm28902 antisense antisense MGP_129S1SvImJ_T0022648.1 MGP_129S1SvImJ_G0016592.1 mouse_genomes_project 1 157616777 157684083 - MGP_129S1SvImJ_P0022648 Smg7 protein_coding protein_coding MGP_129S1SvImJ_T0022649.1 MGP_129S1SvImJ_G0016592.1 mouse_genomes_project 1 157616778 157659695 - MGP_129S1SvImJ_P0022649 Smg7 protein_coding protein_coding MGP_129S1SvImJ_T0022650.1 MGP_129S1SvImJ_G0016592.1 mouse_genomes_project 1 157618652 157684107 - MGP_129S1SvImJ_P0022650 Smg7 protein_coding protein_coding MGP_129S1SvImJ_T0022651.1 MGP_129S1SvImJ_G0016592.1 mouse_genomes_project 1 157625044 157652685 - Smg7 protein_coding processed_transcript MGP_129S1SvImJ_T0022652.1 MGP_129S1SvImJ_G0016592.1 mouse_genomes_project 1 157625066 157629795 - Smg7 protein_coding processed_transcript MGP_129S1SvImJ_T0022653.1 MGP_129S1SvImJ_G0016592.1 mouse_genomes_project 1 157626715 157629710 - Smg7 protein_coding retained_intron MGP_129S1SvImJ_T0009564.1 MGP_129S1SvImJ_G0007680.1 mouse_genomes_project 1 174659084 174659204 - Mir6354 miRNA miRNA MGP_129S1SvImJ_T0012205.1 MGP_129S1SvImJ_G0010294.1 mouse_genomes_project 1 114285619 114286194 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019220.1 MGP_129S1SvImJ_G0015906.1 mouse_genomes_project 1 32282926 32695494 + MGP_129S1SvImJ_P0019220 Dst protein_coding protein_coding MGP_129S1SvImJ_T0019221.1 MGP_129S1SvImJ_G0015906.1 mouse_genomes_project 1 32282973 32618560 + MGP_129S1SvImJ_P0019221 Dst protein_coding unknown_likely_coding MGP_129S1SvImJ_T0019222.1 MGP_129S1SvImJ_G0015906.1 mouse_genomes_project 1 32382339 32558972 + MGP_129S1SvImJ_P0019222 Dst protein_coding protein_coding MGP_129S1SvImJ_T0019223.1 MGP_129S1SvImJ_G0015906.1 mouse_genomes_project 1 32382341 32516290 + MGP_129S1SvImJ_P0019223 Dst protein_coding protein_coding MGP_129S1SvImJ_T0019224.1 MGP_129S1SvImJ_G0015906.1 mouse_genomes_project 1 32382585 32516291 + MGP_129S1SvImJ_P0019224 Dst protein_coding protein_coding MGP_129S1SvImJ_T0019225.1 MGP_129S1SvImJ_G0015906.1 mouse_genomes_project 1 32382639 32547568 + Dst protein_coding retained_intron MGP_129S1SvImJ_T0019226.1 MGP_129S1SvImJ_G0015906.1 mouse_genomes_project 1 32389178 32697526 + MGP_129S1SvImJ_P0019226 Dst protein_coding protein_coding MGP_129S1SvImJ_T0019227.1 MGP_129S1SvImJ_G0015906.1 mouse_genomes_project 1 32389190 32697524 + MGP_129S1SvImJ_P0019227 Dst protein_coding protein_coding MGP_129S1SvImJ_T0019228.1 MGP_129S1SvImJ_G0015906.1 mouse_genomes_project 1 32389190 32697535 + MGP_129S1SvImJ_P0019228 Dst protein_coding protein_coding MGP_129S1SvImJ_T0019229.1 MGP_129S1SvImJ_G0015906.1 mouse_genomes_project 1 32462708 32494012 + Dst protein_coding retained_intron MGP_129S1SvImJ_T0019230.1 MGP_129S1SvImJ_G0015906.1 mouse_genomes_project 1 32500618 32537271 + Dst protein_coding processed_transcript MGP_129S1SvImJ_T0019231.1 MGP_129S1SvImJ_G0015906.1 mouse_genomes_project 1 32543169 32568084 + MGP_129S1SvImJ_P0019231 Dst protein_coding protein_coding MGP_129S1SvImJ_T0019232.1 MGP_129S1SvImJ_G0015906.1 mouse_genomes_project 1 32543169 32577457 + MGP_129S1SvImJ_P0019232 Dst protein_coding protein_coding MGP_129S1SvImJ_T0019233.1 MGP_129S1SvImJ_G0015906.1 mouse_genomes_project 1 32543169 32697278 + MGP_129S1SvImJ_P0019233 Dst protein_coding protein_coding MGP_129S1SvImJ_T0019234.1 MGP_129S1SvImJ_G0015906.1 mouse_genomes_project 1 32544757 32548278 + Dst protein_coding retained_intron MGP_129S1SvImJ_T0019235.1 MGP_129S1SvImJ_G0015906.1 mouse_genomes_project 1 32563089 32567428 + Dst protein_coding retained_intron MGP_129S1SvImJ_T0019236.1 MGP_129S1SvImJ_G0015906.1 mouse_genomes_project 1 32621149 32695494 + MGP_129S1SvImJ_P0019236 Dst protein_coding unknown_likely_coding MGP_129S1SvImJ_T0019237.1 MGP_129S1SvImJ_G0015906.1 mouse_genomes_project 1 32642374 32697278 + MGP_129S1SvImJ_P0019237 Dst protein_coding protein_coding MGP_129S1SvImJ_T0019238.1 MGP_129S1SvImJ_G0015906.1 mouse_genomes_project 1 32655142 32658668 + Dst protein_coding retained_intron MGP_129S1SvImJ_T0019239.1 MGP_129S1SvImJ_G0015906.1 mouse_genomes_project 1 32681311 32691359 + MGP_129S1SvImJ_P0019239 Dst protein_coding protein_coding MGP_129S1SvImJ_T0019240.1 MGP_129S1SvImJ_G0015906.1 mouse_genomes_project 1 32682302 32694547 + MGP_129S1SvImJ_P0019240 Dst protein_coding protein_coding MGP_129S1SvImJ_T0020933.1 MGP_129S1SvImJ_G0016221.1 mouse_genomes_project 1 83967975 83996681 - MGP_129S1SvImJ_P0020933 Slc19a3 protein_coding protein_coding MGP_129S1SvImJ_T0020934.1 MGP_129S1SvImJ_G0016221.1 mouse_genomes_project 1 83967976 83978530 - Slc19a3 protein_coding processed_transcript MGP_129S1SvImJ_T0020935.1 MGP_129S1SvImJ_G0016221.1 mouse_genomes_project 1 83969252 83996664 - MGP_129S1SvImJ_P0020935 Slc19a3 protein_coding protein_coding MGP_129S1SvImJ_T0020145.1 MGP_129S1SvImJ_G0016076.1 mouse_genomes_project 1 60416466 60448058 + Cyp20a1 protein_coding retained_intron MGP_129S1SvImJ_T0020146.1 MGP_129S1SvImJ_G0016076.1 mouse_genomes_project 1 60416466 60467012 + MGP_129S1SvImJ_P0020146 Cyp20a1 protein_coding protein_coding MGP_129S1SvImJ_T0020147.1 MGP_129S1SvImJ_G0016076.1 mouse_genomes_project 1 60416466 60467012 + MGP_129S1SvImJ_P0020147 Cyp20a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0005862.1 MGP_129S1SvImJ_G0004920.1 mouse_genomes_project 1 94353767 94355021 - Gm29482 lincRNA lincRNA MGP_129S1SvImJ_T0012158.1 MGP_129S1SvImJ_G0010247.1 mouse_genomes_project 1 95046758 95047547 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022013.1 MGP_129S1SvImJ_G0016461.1 mouse_genomes_project 1 135303076 135310297 + MGP_129S1SvImJ_P0022013 Rab29 protein_coding protein_coding MGP_129S1SvImJ_T0022014.1 MGP_129S1SvImJ_G0016461.1 mouse_genomes_project 1 135303092 135310445 + MGP_129S1SvImJ_P0022014 Rab29 protein_coding protein_coding MGP_129S1SvImJ_T0022015.1 MGP_129S1SvImJ_G0016461.1 mouse_genomes_project 1 135303363 135310060 + MGP_129S1SvImJ_P0022015 Rab29 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022016.1 MGP_129S1SvImJ_G0016461.1 mouse_genomes_project 1 135303505 135306825 + Rab29 protein_coding retained_intron MGP_129S1SvImJ_T0102098.1 MGP_129S1SvImJ_G0039933.1 mouse_genomes_project 1 180089478 180090022 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0000731.1 MGP_129S1SvImJ_G0000668.1 mouse_genomes_project 1 164481596 164482002 - TEC TEC MGP_129S1SvImJ_T0000555.1 MGP_129S1SvImJ_G0000494.1 mouse_genomes_project 1 81085891 81087576 - TEC TEC MGP_129S1SvImJ_T0017001.1 MGP_129S1SvImJ_G0015089.1 mouse_genomes_project 1 6774693 6866780 - 2610203C22Rik processed_transcript antisense MGP_129S1SvImJ_T0017002.1 MGP_129S1SvImJ_G0015089.1 mouse_genomes_project 1 6779533 6866825 - 2610203C22Rik processed_transcript retained_intron MGP_129S1SvImJ_T0017003.1 MGP_129S1SvImJ_G0015089.1 mouse_genomes_project 1 6831043 6866832 - 2610203C22Rik processed_transcript antisense MGP_129S1SvImJ_T0017004.1 MGP_129S1SvImJ_G0015089.1 mouse_genomes_project 1 6831648 6866863 - 2610203C22Rik processed_transcript antisense MGP_129S1SvImJ_T0017005.1 MGP_129S1SvImJ_G0015089.1 mouse_genomes_project 1 6834051 6866852 - 2610203C22Rik processed_transcript antisense MGP_129S1SvImJ_T0012021.1 MGP_129S1SvImJ_G0010110.1 mouse_genomes_project 1 45063479 45063944 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098412.1 MGP_129S1SvImJ_G0036497.1 mouse_genomes_project 1 29347695 29347833 - Gm27362 rRNA rRNA MGP_129S1SvImJ_T0012271.1 MGP_129S1SvImJ_G0010360.1 mouse_genomes_project 1 142956622 142957061 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012152.1 MGP_129S1SvImJ_G0010241.1 mouse_genomes_project 1 92834270 92835649 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023277.1 MGP_129S1SvImJ_G0016713.1 mouse_genomes_project 1 172912432 172932935 + MGP_129S1SvImJ_P0023277 Aldh9a1 protein_coding protein_coding MGP_129S1SvImJ_T0023278.1 MGP_129S1SvImJ_G0016713.1 mouse_genomes_project 1 172912677 172916853 + Aldh9a1 protein_coding processed_transcript MGP_129S1SvImJ_T0023279.1 MGP_129S1SvImJ_G0016713.1 mouse_genomes_project 1 172912753 172918255 + Aldh9a1 protein_coding retained_intron MGP_129S1SvImJ_T0023280.1 MGP_129S1SvImJ_G0016713.1 mouse_genomes_project 1 172928564 172932050 + Aldh9a1 protein_coding retained_intron MGP_129S1SvImJ_T0102089.1 MGP_129S1SvImJ_G0039924.1 mouse_genomes_project 1 175528330 175528534 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0000824.1 MGP_129S1SvImJ_G0000758.1 mouse_genomes_project 1 200377268 200379841 + TEC TEC MGP_129S1SvImJ_T0002812.1 MGP_129S1SvImJ_G0002672.1 mouse_genomes_project 1 39369004 39377441 - Gm35801 antisense antisense MGP_129S1SvImJ_T0002813.1 MGP_129S1SvImJ_G0002672.1 mouse_genomes_project 1 39369024 39377427 - Gm35801 antisense antisense MGP_129S1SvImJ_T0005721.1 MGP_129S1SvImJ_G0004815.1 mouse_genomes_project 1 41244325 41269694 - Gm28140 lincRNA lincRNA MGP_129S1SvImJ_T0019523.1 MGP_129S1SvImJ_G0015960.1 mouse_genomes_project 1 38374436 38408622 - MGP_129S1SvImJ_P0019523 Creg2 protein_coding protein_coding MGP_129S1SvImJ_T0000569.1 MGP_129S1SvImJ_G0000508.1 mouse_genomes_project 1 85698539 85705173 - TEC TEC MGP_129S1SvImJ_T0003005.1 MGP_129S1SvImJ_G0002822.1 mouse_genomes_project 1 197127382 197128346 + Gm28172 antisense antisense MGP_129S1SvImJ_T0021915.1 MGP_129S1SvImJ_G0016435.1 mouse_genomes_project 1 133967742 134015572 - MGP_129S1SvImJ_P0021915 Zp3r protein_coding protein_coding MGP_129S1SvImJ_T0021916.1 MGP_129S1SvImJ_G0016435.1 mouse_genomes_project 1 133967742 134015572 - MGP_129S1SvImJ_P0021916 Zp3r protein_coding protein_coding MGP_129S1SvImJ_T0021917.1 MGP_129S1SvImJ_G0016435.1 mouse_genomes_project 1 133967745 134015563 - MGP_129S1SvImJ_P0021917 Zp3r protein_coding protein_coding MGP_129S1SvImJ_T0020861.1 MGP_129S1SvImJ_G0016207.1 mouse_genomes_project 1 80577862 80583292 + MGP_129S1SvImJ_P0020861 Mrpl44 protein_coding protein_coding MGP_129S1SvImJ_T0020862.1 MGP_129S1SvImJ_G0016207.1 mouse_genomes_project 1 80577960 80580395 + Mrpl44 protein_coding retained_intron MGP_129S1SvImJ_T0023523.1 MGP_129S1SvImJ_G0016773.1 mouse_genomes_project 1 177747464 177791073 + MGP_129S1SvImJ_P0023523 Slamf6 protein_coding protein_coding MGP_129S1SvImJ_T0023524.1 MGP_129S1SvImJ_G0016773.1 mouse_genomes_project 1 177747486 177772608 + MGP_129S1SvImJ_P0023524 Slamf6 protein_coding protein_coding MGP_129S1SvImJ_T0023525.1 MGP_129S1SvImJ_G0016773.1 mouse_genomes_project 1 177747631 177748628 + Slamf6 protein_coding retained_intron MGP_129S1SvImJ_T0023526.1 MGP_129S1SvImJ_G0016773.1 mouse_genomes_project 1 177747657 177779700 + MGP_129S1SvImJ_P0023526 Slamf6 protein_coding protein_coding MGP_129S1SvImJ_T0023527.1 MGP_129S1SvImJ_G0016773.1 mouse_genomes_project 1 177749439 177762942 + MGP_129S1SvImJ_P0023527 Slamf6 protein_coding protein_coding MGP_129S1SvImJ_T0023528.1 MGP_129S1SvImJ_G0016773.1 mouse_genomes_project 1 177760359 177763279 + Slamf6 protein_coding retained_intron MGP_129S1SvImJ_T0023529.1 MGP_129S1SvImJ_G0016773.1 mouse_genomes_project 1 177771324 177780493 + Slamf6 protein_coding processed_transcript MGP_129S1SvImJ_T0005769.1 MGP_129S1SvImJ_G0004845.1 mouse_genomes_project 1 61392747 61398589 + Gm11587 lincRNA lincRNA MGP_129S1SvImJ_T0021561.1 MGP_129S1SvImJ_G0016361.1 mouse_genomes_project 1 99571521 99619248 - MGP_129S1SvImJ_P0021561 Pam protein_coding protein_coding MGP_129S1SvImJ_T0021562.1 MGP_129S1SvImJ_G0016361.1 mouse_genomes_project 1 99599633 99876247 - MGP_129S1SvImJ_P0021562 Pam protein_coding protein_coding MGP_129S1SvImJ_T0021563.1 MGP_129S1SvImJ_G0016361.1 mouse_genomes_project 1 99599634 99876258 - MGP_129S1SvImJ_P0021563 Pam protein_coding protein_coding MGP_129S1SvImJ_T0021564.1 MGP_129S1SvImJ_G0016361.1 mouse_genomes_project 1 99599639 99753852 - MGP_129S1SvImJ_P0021564 Pam protein_coding protein_coding MGP_129S1SvImJ_T0021565.1 MGP_129S1SvImJ_G0016361.1 mouse_genomes_project 1 99600236 99618826 - MGP_129S1SvImJ_P0021565 Pam protein_coding protein_coding MGP_129S1SvImJ_T0021566.1 MGP_129S1SvImJ_G0016361.1 mouse_genomes_project 1 99600496 99613084 - Pam protein_coding retained_intron MGP_129S1SvImJ_T0021567.1 MGP_129S1SvImJ_G0016361.1 mouse_genomes_project 1 99601218 99604422 - Pam protein_coding processed_transcript MGP_129S1SvImJ_T0021568.1 MGP_129S1SvImJ_G0016361.1 mouse_genomes_project 1 99604095 99619318 - Pam protein_coding retained_intron MGP_129S1SvImJ_T0021569.1 MGP_129S1SvImJ_G0016361.1 mouse_genomes_project 1 99615968 99618828 - Pam protein_coding retained_intron MGP_129S1SvImJ_T0021570.1 MGP_129S1SvImJ_G0016361.1 mouse_genomes_project 1 99631363 99642903 - Pam protein_coding retained_intron MGP_129S1SvImJ_T0021571.1 MGP_129S1SvImJ_G0016361.1 mouse_genomes_project 1 99633072 99670636 - MGP_129S1SvImJ_P0021571 Pam protein_coding protein_coding MGP_129S1SvImJ_T0021572.1 MGP_129S1SvImJ_G0016361.1 mouse_genomes_project 1 99708805 99753665 - Pam protein_coding retained_intron MGP_129S1SvImJ_T0021573.1 MGP_129S1SvImJ_G0016361.1 mouse_genomes_project 1 99732938 99753841 - Pam protein_coding processed_transcript MGP_129S1SvImJ_T0021574.1 MGP_129S1SvImJ_G0016361.1 mouse_genomes_project 1 99833587 99837481 - Pam protein_coding retained_intron MGP_129S1SvImJ_T0021575.1 MGP_129S1SvImJ_G0016361.1 mouse_genomes_project 1 99837570 99876272 - Pam protein_coding processed_transcript MGP_129S1SvImJ_T0005854.1 MGP_129S1SvImJ_G0004912.1 mouse_genomes_project 1 92835915 92843119 - Gm26683 lincRNA lincRNA MGP_129S1SvImJ_T0019342.1 MGP_129S1SvImJ_G0015927.1 mouse_genomes_project 1 35071246 35085638 - MGP_129S1SvImJ_P0019342 Ankrd39 protein_coding protein_coding MGP_129S1SvImJ_T0023332.1 MGP_129S1SvImJ_G0016729.1 mouse_genomes_project 1 175991348 175999430 - MGP_129S1SvImJ_P0023332 Gm7694 protein_coding protein_coding MGP_129S1SvImJ_T0022624.1 MGP_129S1SvImJ_G0016586.1 mouse_genomes_project 1 157136244 157151735 - MGP_129S1SvImJ_P0022624 Tsen15 protein_coding protein_coding MGP_129S1SvImJ_T0022625.1 MGP_129S1SvImJ_G0016586.1 mouse_genomes_project 1 157136347 157137592 - Tsen15 protein_coding retained_intron MGP_129S1SvImJ_T0022626.1 MGP_129S1SvImJ_G0016586.1 mouse_genomes_project 1 157136714 157151645 - MGP_129S1SvImJ_P0022626 Tsen15 protein_coding protein_coding MGP_129S1SvImJ_T0022627.1 MGP_129S1SvImJ_G0016586.1 mouse_genomes_project 1 157136721 157148752 - Tsen15 protein_coding retained_intron MGP_129S1SvImJ_T0022628.1 MGP_129S1SvImJ_G0016586.1 mouse_genomes_project 1 157137284 157149099 - Tsen15 protein_coding retained_intron MGP_129S1SvImJ_T0022629.1 MGP_129S1SvImJ_G0016586.1 mouse_genomes_project 1 157148351 157151741 - Tsen15 protein_coding processed_transcript MGP_129S1SvImJ_T0022630.1 MGP_129S1SvImJ_G0016586.1 mouse_genomes_project 1 157149209 157151673 - Tsen15 protein_coding retained_intron MGP_129S1SvImJ_T0019918.1 MGP_129S1SvImJ_G0016040.1 mouse_genomes_project 1 57204428 57224876 - MGP_129S1SvImJ_P0019918 Tyw5 protein_coding protein_coding MGP_129S1SvImJ_T0019919.1 MGP_129S1SvImJ_G0016040.1 mouse_genomes_project 1 57204431 57224246 - Tyw5 protein_coding retained_intron MGP_129S1SvImJ_T0019920.1 MGP_129S1SvImJ_G0016040.1 mouse_genomes_project 1 57204431 57224449 - MGP_129S1SvImJ_P0019920 Tyw5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019921.1 MGP_129S1SvImJ_G0016040.1 mouse_genomes_project 1 57204596 57206989 - Tyw5 protein_coding processed_transcript MGP_129S1SvImJ_T0019922.1 MGP_129S1SvImJ_G0016040.1 mouse_genomes_project 1 57204607 57209916 - Tyw5 protein_coding retained_intron MGP_129S1SvImJ_T0019923.1 MGP_129S1SvImJ_G0016040.1 mouse_genomes_project 1 57204857 57224218 - MGP_129S1SvImJ_P0019923 Tyw5 protein_coding protein_coding MGP_129S1SvImJ_T0019924.1 MGP_129S1SvImJ_G0016040.1 mouse_genomes_project 1 57204877 57207958 - Tyw5 protein_coding retained_intron MGP_129S1SvImJ_T0019925.1 MGP_129S1SvImJ_G0016040.1 mouse_genomes_project 1 57206929 57217727 - Tyw5 protein_coding processed_transcript MGP_129S1SvImJ_T0019926.1 MGP_129S1SvImJ_G0016040.1 mouse_genomes_project 1 57207646 57224246 - MGP_129S1SvImJ_P0019926 Tyw5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019927.1 MGP_129S1SvImJ_G0016040.1 mouse_genomes_project 1 57209402 57224312 - Tyw5 protein_coding retained_intron MGP_129S1SvImJ_T0019884.1 MGP_129S1SvImJ_G0016031.1 mouse_genomes_project 1 54802016 54805192 + MGP_129S1SvImJ_P0019884 Hspe1 protein_coding protein_coding MGP_129S1SvImJ_T0019885.1 MGP_129S1SvImJ_G0016031.1 mouse_genomes_project 1 54802198 54803800 + Hspe1 protein_coding retained_intron MGP_129S1SvImJ_T0022409.1 MGP_129S1SvImJ_G0016543.1 mouse_genomes_project 1 140482921 140488074 + MGP_129S1SvImJ_P0022409 Zfp281 protein_coding protein_coding MGP_129S1SvImJ_T0022410.1 MGP_129S1SvImJ_G0016543.1 mouse_genomes_project 1 140482921 140488074 + MGP_129S1SvImJ_P0022410 Zfp281 protein_coding protein_coding MGP_129S1SvImJ_T0000712.1 MGP_129S1SvImJ_G0000649.1 mouse_genomes_project 1 158751359 158753916 - TEC TEC MGP_129S1SvImJ_T0000642.1 MGP_129S1SvImJ_G0000581.1 mouse_genomes_project 1 132590769 132593256 + TEC TEC MGP_129S1SvImJ_T0011883.1 MGP_129S1SvImJ_G0009972.1 mouse_genomes_project 1 3624984 3640519 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012039.1 MGP_129S1SvImJ_G0010128.1 mouse_genomes_project 1 49986910 49987072 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002907.1 MGP_129S1SvImJ_G0002743.1 mouse_genomes_project 1 136229052 136232524 + Gm10538 antisense antisense MGP_129S1SvImJ_T0023408.1 MGP_129S1SvImJ_G0016748.1 mouse_genomes_project 1 177010847 177015487 - MGP_129S1SvImJ_P0023408 Fcer1g protein_coding protein_coding MGP_129S1SvImJ_T0023409.1 MGP_129S1SvImJ_G0016748.1 mouse_genomes_project 1 177010855 177015429 - MGP_129S1SvImJ_P0023409 Fcer1g protein_coding protein_coding MGP_129S1SvImJ_T0023410.1 MGP_129S1SvImJ_G0016748.1 mouse_genomes_project 1 177012320 177015461 - Fcer1g protein_coding retained_intron MGP_129S1SvImJ_T0012049.1 MGP_129S1SvImJ_G0010138.1 mouse_genomes_project 1 52918258 52918831 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012337.1 MGP_129S1SvImJ_G0010426.1 mouse_genomes_project 1 171452879 171454788 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005995.1 MGP_129S1SvImJ_G0005025.1 mouse_genomes_project 1 170408745 170410632 + 1700029M03Rik lincRNA lincRNA MGP_129S1SvImJ_T0005996.1 MGP_129S1SvImJ_G0005025.1 mouse_genomes_project 1 170408747 170409227 + 1700029M03Rik lincRNA lincRNA MGP_129S1SvImJ_T0100325.1 MGP_129S1SvImJ_G0038392.1 mouse_genomes_project 1 38262688 38262904 + Gm24826 snoRNA snoRNA MGP_129S1SvImJ_T0012130.1 MGP_129S1SvImJ_G0010219.1 mouse_genomes_project 1 82683032 82683738 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021503.1 MGP_129S1SvImJ_G0016346.1 mouse_genomes_project 1 95325816 95336007 + MGP_129S1SvImJ_P0021503 Bok protein_coding protein_coding MGP_129S1SvImJ_T0021504.1 MGP_129S1SvImJ_G0016346.1 mouse_genomes_project 1 95325858 95335453 + MGP_129S1SvImJ_P0021504 Bok protein_coding protein_coding MGP_129S1SvImJ_T0021505.1 MGP_129S1SvImJ_G0016346.1 mouse_genomes_project 1 95326419 95334305 + MGP_129S1SvImJ_P0021505 Bok protein_coding protein_coding MGP_129S1SvImJ_T0021506.1 MGP_129S1SvImJ_G0016346.1 mouse_genomes_project 1 95329363 95335712 + MGP_129S1SvImJ_P0021506 Bok protein_coding protein_coding MGP_129S1SvImJ_T0021507.1 MGP_129S1SvImJ_G0016346.1 mouse_genomes_project 1 95334050 95335698 + Bok protein_coding processed_transcript MGP_129S1SvImJ_T0000699.1 MGP_129S1SvImJ_G0000636.1 mouse_genomes_project 1 154032283 154033739 - TEC TEC MGP_129S1SvImJ_T0002831.1 MGP_129S1SvImJ_G0002687.1 mouse_genomes_project 1 59068093 59070400 + G730003C15Rik antisense antisense MGP_129S1SvImJ_T0002832.1 MGP_129S1SvImJ_G0002687.1 mouse_genomes_project 1 59068093 59070402 + G730003C15Rik antisense antisense MGP_129S1SvImJ_T0006009.1 MGP_129S1SvImJ_G0005036.1 mouse_genomes_project 1 175863678 175864823 + Gm37748 lincRNA lincRNA MGP_129S1SvImJ_T0024255.1 MGP_129S1SvImJ_G0016948.1 mouse_genomes_project 1 198899510 198911211 + MGP_129S1SvImJ_P0024255 Nek2 protein_coding protein_coding MGP_129S1SvImJ_T0024256.1 MGP_129S1SvImJ_G0016948.1 mouse_genomes_project 1 198899576 198906396 + Nek2 protein_coding retained_intron MGP_129S1SvImJ_T0024257.1 MGP_129S1SvImJ_G0016948.1 mouse_genomes_project 1 198900248 198903927 + Nek2 protein_coding retained_intron MGP_129S1SvImJ_T0024258.1 MGP_129S1SvImJ_G0016948.1 mouse_genomes_project 1 198905249 198908092 + Nek2 protein_coding processed_transcript MGP_129S1SvImJ_T0023273.1 MGP_129S1SvImJ_G0016712.1 mouse_genomes_project 1 172866098 172888988 + MGP_129S1SvImJ_P0023273 Tmco1 protein_coding protein_coding MGP_129S1SvImJ_T0023274.1 MGP_129S1SvImJ_G0016712.1 mouse_genomes_project 1 172866390 172888988 + MGP_129S1SvImJ_P0023274 Tmco1 protein_coding protein_coding MGP_129S1SvImJ_T0023275.1 MGP_129S1SvImJ_G0016712.1 mouse_genomes_project 1 172866456 172892205 + MGP_129S1SvImJ_P0023275 Tmco1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023276.1 MGP_129S1SvImJ_G0016712.1 mouse_genomes_project 1 172872826 172888803 + MGP_129S1SvImJ_P0023276 Tmco1 protein_coding protein_coding MGP_129S1SvImJ_T0000447.1 MGP_129S1SvImJ_G0000387.1 mouse_genomes_project 1 23701464 23704767 - TEC TEC MGP_129S1SvImJ_T0020803.1 MGP_129S1SvImJ_G0016194.1 mouse_genomes_project 1 76133912 76149768 + MGP_129S1SvImJ_P0020803 Slc4a3 protein_coding protein_coding MGP_129S1SvImJ_T0020804.1 MGP_129S1SvImJ_G0016194.1 mouse_genomes_project 1 76133941 76135153 + Slc4a3 protein_coding retained_intron MGP_129S1SvImJ_T0020805.1 MGP_129S1SvImJ_G0016194.1 mouse_genomes_project 1 76134107 76135684 + MGP_129S1SvImJ_P0020805 Slc4a3 protein_coding protein_coding MGP_129S1SvImJ_T0020806.1 MGP_129S1SvImJ_G0016194.1 mouse_genomes_project 1 76134141 76146500 + MGP_129S1SvImJ_P0020806 Slc4a3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020807.1 MGP_129S1SvImJ_G0016194.1 mouse_genomes_project 1 76134172 76135390 + Slc4a3 protein_coding retained_intron MGP_129S1SvImJ_T0020808.1 MGP_129S1SvImJ_G0016194.1 mouse_genomes_project 1 76134178 76135657 + MGP_129S1SvImJ_P0020808 Slc4a3 protein_coding protein_coding MGP_129S1SvImJ_T0020809.1 MGP_129S1SvImJ_G0016194.1 mouse_genomes_project 1 76134289 76148492 + Slc4a3 protein_coding retained_intron MGP_129S1SvImJ_T0020810.1 MGP_129S1SvImJ_G0016194.1 mouse_genomes_project 1 76134301 76135180 + Slc4a3 protein_coding retained_intron MGP_129S1SvImJ_T0020811.1 MGP_129S1SvImJ_G0016194.1 mouse_genomes_project 1 76137244 76139028 + MGP_129S1SvImJ_P0020811 Slc4a3 protein_coding protein_coding MGP_129S1SvImJ_T0020812.1 MGP_129S1SvImJ_G0016194.1 mouse_genomes_project 1 76137413 76138775 + Slc4a3 protein_coding retained_intron MGP_129S1SvImJ_T0020813.1 MGP_129S1SvImJ_G0016194.1 mouse_genomes_project 1 76138240 76142784 + MGP_129S1SvImJ_P0020813 Slc4a3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020814.1 MGP_129S1SvImJ_G0016194.1 mouse_genomes_project 1 76139354 76141378 + MGP_129S1SvImJ_P0020814 Slc4a3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0002773.1 MGP_129S1SvImJ_G0002642.1 mouse_genomes_project 1 7246969 7257002 + Gm15818 antisense antisense MGP_129S1SvImJ_T0000756.1 MGP_129S1SvImJ_G0000693.1 mouse_genomes_project 1 171075216 171076025 + TEC TEC MGP_129S1SvImJ_T0020424.1 MGP_129S1SvImJ_G0016129.1 mouse_genomes_project 1 72758117 72782953 - MGP_129S1SvImJ_P0020424 Pecr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020425.1 MGP_129S1SvImJ_G0016129.1 mouse_genomes_project 1 72758122 72783007 - MGP_129S1SvImJ_P0020425 Pecr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020426.1 MGP_129S1SvImJ_G0016129.1 mouse_genomes_project 1 72758122 72783008 - MGP_129S1SvImJ_P0020426 Pecr protein_coding protein_coding MGP_129S1SvImJ_T0020427.1 MGP_129S1SvImJ_G0016129.1 mouse_genomes_project 1 72765941 72782953 - MGP_129S1SvImJ_P0020427 Pecr protein_coding protein_coding MGP_129S1SvImJ_T0019965.1 MGP_129S1SvImJ_G0016048.1 mouse_genomes_project 1 58128194 58236821 + MGP_129S1SvImJ_P0019965 Aox2 protein_coding protein_coding MGP_129S1SvImJ_T0011911.1 MGP_129S1SvImJ_G0010000.1 mouse_genomes_project 1 8532272 8532881 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024286.1 MGP_129S1SvImJ_G0016954.1 mouse_genomes_project 1 199551179 199830841 - MGP_129S1SvImJ_P0024286 Hhat protein_coding protein_coding MGP_129S1SvImJ_T0024287.1 MGP_129S1SvImJ_G0016954.1 mouse_genomes_project 1 199567300 199830851 - MGP_129S1SvImJ_P0024287 Hhat protein_coding protein_coding MGP_129S1SvImJ_T0024288.1 MGP_129S1SvImJ_G0016954.1 mouse_genomes_project 1 199597556 199830846 - MGP_129S1SvImJ_P0024288 Hhat protein_coding non_stop_decay MGP_129S1SvImJ_T0024289.1 MGP_129S1SvImJ_G0016954.1 mouse_genomes_project 1 199675097 199784365 - Hhat protein_coding processed_transcript MGP_129S1SvImJ_T0024290.1 MGP_129S1SvImJ_G0016954.1 mouse_genomes_project 1 199702285 199739624 - Hhat protein_coding processed_transcript MGP_129S1SvImJ_T0024291.1 MGP_129S1SvImJ_G0016954.1 mouse_genomes_project 1 199784353 199796585 - Hhat protein_coding processed_transcript MGP_129S1SvImJ_T0024292.1 MGP_129S1SvImJ_G0016954.1 mouse_genomes_project 1 199795715 199830620 - Hhat protein_coding processed_transcript MGP_129S1SvImJ_T0000828.1 MGP_129S1SvImJ_G0000762.1 mouse_genomes_project 1 201821891 201823729 + TEC TEC MGP_129S1SvImJ_T0012204.1 MGP_129S1SvImJ_G0010293.1 mouse_genomes_project 1 114200555 114202850 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000627.1 MGP_129S1SvImJ_G0000566.1 mouse_genomes_project 1 126537670 126542972 - TEC TEC MGP_129S1SvImJ_T0023388.1 MGP_129S1SvImJ_G0016745.1 mouse_genomes_project 1 176994768 176999647 + MGP_129S1SvImJ_P0023388 Nr1i3 protein_coding protein_coding MGP_129S1SvImJ_T0023389.1 MGP_129S1SvImJ_G0016745.1 mouse_genomes_project 1 176994769 176999645 + MGP_129S1SvImJ_P0023389 Nr1i3 protein_coding protein_coding MGP_129S1SvImJ_T0023390.1 MGP_129S1SvImJ_G0016745.1 mouse_genomes_project 1 176994784 177001504 + MGP_129S1SvImJ_P0023390 Nr1i3 protein_coding protein_coding MGP_129S1SvImJ_T0023391.1 MGP_129S1SvImJ_G0016745.1 mouse_genomes_project 1 176994792 176999803 + Nr1i3 protein_coding retained_intron MGP_129S1SvImJ_T0023392.1 MGP_129S1SvImJ_G0016745.1 mouse_genomes_project 1 176994800 176999647 + MGP_129S1SvImJ_P0023392 Nr1i3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023393.1 MGP_129S1SvImJ_G0016745.1 mouse_genomes_project 1 176994819 176999995 + Nr1i3 protein_coding retained_intron MGP_129S1SvImJ_T0023394.1 MGP_129S1SvImJ_G0016745.1 mouse_genomes_project 1 176994819 176999646 + MGP_129S1SvImJ_P0023394 Nr1i3 protein_coding protein_coding MGP_129S1SvImJ_T0023395.1 MGP_129S1SvImJ_G0016745.1 mouse_genomes_project 1 176995150 176999520 + Nr1i3 protein_coding retained_intron MGP_129S1SvImJ_T0019504.1 MGP_129S1SvImJ_G0015955.1 mouse_genomes_project 1 37916095 38016120 + MGP_129S1SvImJ_P0019504 Npas2 protein_coding protein_coding MGP_129S1SvImJ_T0019505.1 MGP_129S1SvImJ_G0015955.1 mouse_genomes_project 1 37916576 38097715 + MGP_129S1SvImJ_P0019505 Npas2 protein_coding protein_coding MGP_129S1SvImJ_T0019506.1 MGP_129S1SvImJ_G0015955.1 mouse_genomes_project 1 38073791 38078725 + Npas2 protein_coding processed_transcript MGP_129S1SvImJ_T0012358.1 MGP_129S1SvImJ_G0010447.1 mouse_genomes_project 1 183036853 183037690 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012335.1 MGP_129S1SvImJ_G0010424.1 mouse_genomes_project 1 171136899 171137689 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099103.1 MGP_129S1SvImJ_G0037170.1 mouse_genomes_project 1 100805090 100805190 + Gm23434 snRNA snRNA MGP_129S1SvImJ_T0011271.1 MGP_129S1SvImJ_G0009387.1 mouse_genomes_project 1 75373113 75373206 + Gm27507 misc_RNA misc_RNA MGP_129S1SvImJ_T0022433.1 MGP_129S1SvImJ_G0016548.1 mouse_genomes_project 1 142863010 142886180 - MGP_129S1SvImJ_P0022433 Lhx9 protein_coding protein_coding MGP_129S1SvImJ_T0022434.1 MGP_129S1SvImJ_G0016548.1 mouse_genomes_project 1 142863010 142891324 - MGP_129S1SvImJ_P0022434 Lhx9 protein_coding protein_coding MGP_129S1SvImJ_T0022435.1 MGP_129S1SvImJ_G0016548.1 mouse_genomes_project 1 142863010 142894217 - MGP_129S1SvImJ_P0022435 Lhx9 protein_coding protein_coding MGP_129S1SvImJ_T0022436.1 MGP_129S1SvImJ_G0016548.1 mouse_genomes_project 1 142874715 142886152 - MGP_129S1SvImJ_P0022436 Lhx9 protein_coding protein_coding MGP_129S1SvImJ_T0022437.1 MGP_129S1SvImJ_G0016548.1 mouse_genomes_project 1 142875138 142894373 - MGP_129S1SvImJ_P0022437 Lhx9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0022438.1 MGP_129S1SvImJ_G0016548.1 mouse_genomes_project 1 142875485 142877412 - Lhx9 protein_coding retained_intron MGP_129S1SvImJ_T0022439.1 MGP_129S1SvImJ_G0016548.1 mouse_genomes_project 1 142876621 142886177 - MGP_129S1SvImJ_P0022439 Lhx9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0011266.1 MGP_129S1SvImJ_G0009382.1 mouse_genomes_project 1 50013312 50013626 + Gm25843 misc_RNA misc_RNA MGP_129S1SvImJ_T0000504.1 MGP_129S1SvImJ_G0000443.1 mouse_genomes_project 1 56771145 56772983 + TEC TEC MGP_129S1SvImJ_T0022002.1 MGP_129S1SvImJ_G0016458.1 mouse_genomes_project 1 135172752 135199993 + MGP_129S1SvImJ_P0022002 Slc26a9 protein_coding protein_coding MGP_129S1SvImJ_T0022003.1 MGP_129S1SvImJ_G0016458.1 mouse_genomes_project 1 135172768 135192505 + MGP_129S1SvImJ_P0022003 Slc26a9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022004.1 MGP_129S1SvImJ_G0016458.1 mouse_genomes_project 1 135179139 135179820 + Slc26a9 protein_coding retained_intron MGP_129S1SvImJ_T0022005.1 MGP_129S1SvImJ_G0016458.1 mouse_genomes_project 1 135179247 135182716 + MGP_129S1SvImJ_P0022005 Slc26a9 protein_coding protein_coding MGP_129S1SvImJ_T0000564.1 MGP_129S1SvImJ_G0000503.1 mouse_genomes_project 1 84018297 84019390 - TEC TEC MGP_129S1SvImJ_T0020350.1 MGP_129S1SvImJ_G0016116.1 mouse_genomes_project 1 67088725 67120502 - MGP_129S1SvImJ_P0020350 Acadl protein_coding protein_coding MGP_129S1SvImJ_T0020351.1 MGP_129S1SvImJ_G0016116.1 mouse_genomes_project 1 67103066 67115582 - Acadl protein_coding processed_transcript MGP_129S1SvImJ_T0023249.1 MGP_129S1SvImJ_G0016705.1 mouse_genomes_project 1 171908389 171936022 - MGP_129S1SvImJ_P0023249 Pogk protein_coding protein_coding MGP_129S1SvImJ_T0023250.1 MGP_129S1SvImJ_G0016705.1 mouse_genomes_project 1 171917247 171935631 - MGP_129S1SvImJ_P0023250 Pogk protein_coding protein_coding MGP_129S1SvImJ_T0023251.1 MGP_129S1SvImJ_G0016705.1 mouse_genomes_project 1 171918633 171936068 - MGP_129S1SvImJ_P0023251 Pogk protein_coding protein_coding MGP_129S1SvImJ_T0023252.1 MGP_129S1SvImJ_G0016705.1 mouse_genomes_project 1 171920416 171936027 - MGP_129S1SvImJ_P0023252 Pogk protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023253.1 MGP_129S1SvImJ_G0016705.1 mouse_genomes_project 1 171921188 171936103 - MGP_129S1SvImJ_P0023253 Pogk protein_coding protein_coding MGP_129S1SvImJ_T0023254.1 MGP_129S1SvImJ_G0016705.1 mouse_genomes_project 1 171929580 171935529 - MGP_129S1SvImJ_P0023254 Pogk protein_coding protein_coding MGP_129S1SvImJ_T0012260.1 MGP_129S1SvImJ_G0010349.1 mouse_genomes_project 1 137755751 137756183 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102061.1 MGP_129S1SvImJ_G0039896.1 mouse_genomes_project 1 89551636 89552480 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0009561.1 MGP_129S1SvImJ_G0007677.1 mouse_genomes_project 1 172846537 172846638 + Mir6347 miRNA miRNA MGP_129S1SvImJ_T0000386.1 MGP_129S1SvImJ_G0000328.1 mouse_genomes_project 1 1982123 1984238 - TEC TEC MGP_129S1SvImJ_T0005973.1 MGP_129S1SvImJ_G0005008.1 mouse_genomes_project 1 161963873 162049127 - Gm28694 lincRNA lincRNA MGP_129S1SvImJ_T0006006.1 MGP_129S1SvImJ_G0005034.1 mouse_genomes_project 1 172841471 172842170 + Gm2453 lincRNA lincRNA MGP_129S1SvImJ_T0006007.1 MGP_129S1SvImJ_G0005034.1 mouse_genomes_project 1 172841887 172846269 + Gm2453 lincRNA lincRNA MGP_129S1SvImJ_T0101590.1 MGP_129S1SvImJ_G0039646.1 mouse_genomes_project 1 178326751 178344216 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101591.1 MGP_129S1SvImJ_G0039646.1 mouse_genomes_project 1 178343280 178344134 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0012148.1 MGP_129S1SvImJ_G0010237.1 mouse_genomes_project 1 90377717 90378946 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012043.1 MGP_129S1SvImJ_G0010132.1 mouse_genomes_project 1 51797746 51799145 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024230.1 MGP_129S1SvImJ_G0016943.1 mouse_genomes_project 1 198360592 198386722 + MGP_129S1SvImJ_P0024230 Tmem206 protein_coding protein_coding MGP_129S1SvImJ_T0020777.1 MGP_129S1SvImJ_G0016191.1 mouse_genomes_project 1 76057342 76063501 + MGP_129S1SvImJ_P0020777 Tmem198 protein_coding protein_coding MGP_129S1SvImJ_T0020778.1 MGP_129S1SvImJ_G0016191.1 mouse_genomes_project 1 76057386 76060423 + MGP_129S1SvImJ_P0020778 Tmem198 protein_coding protein_coding MGP_129S1SvImJ_T0020779.1 MGP_129S1SvImJ_G0016191.1 mouse_genomes_project 1 76057390 76063513 + MGP_129S1SvImJ_P0020779 Tmem198 protein_coding protein_coding MGP_129S1SvImJ_T0020780.1 MGP_129S1SvImJ_G0016191.1 mouse_genomes_project 1 76057514 76060486 + MGP_129S1SvImJ_P0020780 Tmem198 protein_coding protein_coding MGP_129S1SvImJ_T0021621.1 MGP_129S1SvImJ_G0016372.1 mouse_genomes_project 1 108900257 108942653 - MGP_129S1SvImJ_P0021621 Kdsr protein_coding protein_coding MGP_129S1SvImJ_T0021622.1 MGP_129S1SvImJ_G0016372.1 mouse_genomes_project 1 108930187 108942625 - Kdsr protein_coding retained_intron MGP_129S1SvImJ_T0021623.1 MGP_129S1SvImJ_G0016372.1 mouse_genomes_project 1 108940027 108942609 - Kdsr protein_coding retained_intron MGP_129S1SvImJ_T0102101.1 MGP_129S1SvImJ_G0039936.1 mouse_genomes_project 1 180221402 180222782 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0012284.1 MGP_129S1SvImJ_G0010373.1 mouse_genomes_project 1 149564735 149565728 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020594.1 MGP_129S1SvImJ_G0016162.1 mouse_genomes_project 1 75382785 75395998 + MGP_129S1SvImJ_P0020594 Wnt6 protein_coding protein_coding MGP_129S1SvImJ_T0020595.1 MGP_129S1SvImJ_G0016162.1 mouse_genomes_project 1 75393114 75395278 + Wnt6 protein_coding retained_intron MGP_129S1SvImJ_T0011264.1 MGP_129S1SvImJ_G0009380.1 mouse_genomes_project 1 47107216 47107486 - Gm23829 misc_RNA misc_RNA MGP_129S1SvImJ_T0021182.1 MGP_129S1SvImJ_G0016271.1 mouse_genomes_project 1 89240470 89338030 + MGP_129S1SvImJ_P0021182 Dgkd protein_coding protein_coding MGP_129S1SvImJ_T0021183.1 MGP_129S1SvImJ_G0016271.1 mouse_genomes_project 1 89273564 89308359 + Dgkd protein_coding retained_intron MGP_129S1SvImJ_T0021184.1 MGP_129S1SvImJ_G0016271.1 mouse_genomes_project 1 89310518 89314592 + Dgkd protein_coding retained_intron MGP_129S1SvImJ_T0021185.1 MGP_129S1SvImJ_G0016271.1 mouse_genomes_project 1 89324566 89331793 + MGP_129S1SvImJ_P0021185 Dgkd protein_coding protein_coding MGP_129S1SvImJ_T0021186.1 MGP_129S1SvImJ_G0016271.1 mouse_genomes_project 1 89327936 89338720 + MGP_129S1SvImJ_P0021186 Dgkd protein_coding protein_coding MGP_129S1SvImJ_T0021187.1 MGP_129S1SvImJ_G0016271.1 mouse_genomes_project 1 89328822 89333805 + Dgkd protein_coding retained_intron MGP_129S1SvImJ_T0021188.1 MGP_129S1SvImJ_G0016271.1 mouse_genomes_project 1 89331924 89338718 + MGP_129S1SvImJ_P0021188 Dgkd protein_coding protein_coding MGP_129S1SvImJ_T0018844.1 MGP_129S1SvImJ_G0015828.1 mouse_genomes_project 1 7043344 7157868 + MGP_129S1SvImJ_P0018844 Sgk3 protein_coding protein_coding MGP_129S1SvImJ_T0018845.1 MGP_129S1SvImJ_G0015828.1 mouse_genomes_project 1 7043380 7157870 + MGP_129S1SvImJ_P0018845 Sgk3 protein_coding protein_coding MGP_129S1SvImJ_T0018846.1 MGP_129S1SvImJ_G0015828.1 mouse_genomes_project 1 7043380 7157795 + MGP_129S1SvImJ_P0018846 Sgk3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018847.1 MGP_129S1SvImJ_G0015828.1 mouse_genomes_project 1 7043395 7081628 + Sgk3 protein_coding retained_intron MGP_129S1SvImJ_T0018848.1 MGP_129S1SvImJ_G0015828.1 mouse_genomes_project 1 7043422 7156643 + MGP_129S1SvImJ_P0018848 Sgk3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018849.1 MGP_129S1SvImJ_G0015828.1 mouse_genomes_project 1 7043445 7157033 + MGP_129S1SvImJ_P0018849 Sgk3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018850.1 MGP_129S1SvImJ_G0015828.1 mouse_genomes_project 1 7102226 7157868 + MGP_129S1SvImJ_P0018850 Sgk3 protein_coding protein_coding MGP_129S1SvImJ_T0018851.1 MGP_129S1SvImJ_G0015828.1 mouse_genomes_project 1 7102275 7119727 + Sgk3 protein_coding processed_transcript MGP_129S1SvImJ_T0018852.1 MGP_129S1SvImJ_G0015828.1 mouse_genomes_project 1 7102275 7126638 + Sgk3 protein_coding retained_intron MGP_129S1SvImJ_T0018853.1 MGP_129S1SvImJ_G0015828.1 mouse_genomes_project 1 7102351 7156878 + MGP_129S1SvImJ_P0018853 Sgk3 protein_coding protein_coding MGP_129S1SvImJ_T0018854.1 MGP_129S1SvImJ_G0015828.1 mouse_genomes_project 1 7139965 7145739 + Sgk3 protein_coding retained_intron MGP_129S1SvImJ_T0018855.1 MGP_129S1SvImJ_G0015828.1 mouse_genomes_project 1 7152463 7156212 + Sgk3 protein_coding retained_intron MGP_129S1SvImJ_T0009578.1 MGP_129S1SvImJ_G0007694.1 mouse_genomes_project 1 200614063 200614131 - Mir205 miRNA miRNA MGP_129S1SvImJ_T0000554.1 MGP_129S1SvImJ_G0000493.1 mouse_genomes_project 1 81065111 81066278 - TEC TEC MGP_129S1SvImJ_T0000623.1 MGP_129S1SvImJ_G0000562.1 mouse_genomes_project 1 126332218 126335226 - TEC TEC MGP_129S1SvImJ_T0009494.1 MGP_129S1SvImJ_G0007610.1 mouse_genomes_project 1 37908203 37908300 - Mir6349 miRNA miRNA MGP_129S1SvImJ_T0021320.1 MGP_129S1SvImJ_G0016306.1 mouse_genomes_project 1 92893589 92904968 + MGP_129S1SvImJ_P0021320 Klhl30 protein_coding protein_coding MGP_129S1SvImJ_T0011924.1 MGP_129S1SvImJ_G0010013.1 mouse_genomes_project 1 14932592 14933064 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023125.1 MGP_129S1SvImJ_G0016680.1 mouse_genomes_project 1 169578581 169652606 + MGP_129S1SvImJ_P0023125 F5 protein_coding protein_coding MGP_129S1SvImJ_T0023591.1 MGP_129S1SvImJ_G0016785.1 mouse_genomes_project 1 178180222 178188884 - MGP_129S1SvImJ_P0023591 Kcnj9 protein_coding protein_coding MGP_129S1SvImJ_T0023592.1 MGP_129S1SvImJ_G0016785.1 mouse_genomes_project 1 178181815 178188848 - MGP_129S1SvImJ_P0023592 Kcnj9 protein_coding protein_coding MGP_129S1SvImJ_T0023593.1 MGP_129S1SvImJ_G0016785.1 mouse_genomes_project 1 178184871 178187673 - Kcnj9 protein_coding retained_intron MGP_129S1SvImJ_T0002826.1 MGP_129S1SvImJ_G0002683.1 mouse_genomes_project 1 54959115 54970109 + Gm10561 antisense antisense MGP_129S1SvImJ_T0017078.1 MGP_129S1SvImJ_G0015118.1 mouse_genomes_project 1 154710423 154740356 - Ptgs2os processed_transcript antisense MGP_129S1SvImJ_T0017079.1 MGP_129S1SvImJ_G0015118.1 mouse_genomes_project 1 154738719 154740502 - Ptgs2os processed_transcript retained_intron MGP_129S1SvImJ_T0021716.1 MGP_129S1SvImJ_G0016393.1 mouse_genomes_project 1 121551104 121774272 - MGP_129S1SvImJ_P0021716 Gli2 protein_coding protein_coding MGP_129S1SvImJ_T0021717.1 MGP_129S1SvImJ_G0016393.1 mouse_genomes_project 1 121565446 121773992 - MGP_129S1SvImJ_P0021717 Gli2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021718.1 MGP_129S1SvImJ_G0016393.1 mouse_genomes_project 1 121565446 121773992 - MGP_129S1SvImJ_P0021718 Gli2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021719.1 MGP_129S1SvImJ_G0016393.1 mouse_genomes_project 1 121565446 121773992 - MGP_129S1SvImJ_P0021719 Gli2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021720.1 MGP_129S1SvImJ_G0016393.1 mouse_genomes_project 1 121565446 121773992 - MGP_129S1SvImJ_P0021720 Gli2 protein_coding protein_coding MGP_129S1SvImJ_T0021721.1 MGP_129S1SvImJ_G0016393.1 mouse_genomes_project 1 121565446 121773992 - MGP_129S1SvImJ_P0021721 Gli2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021722.1 MGP_129S1SvImJ_G0016393.1 mouse_genomes_project 1 121565448 121773992 - MGP_129S1SvImJ_P0021722 Gli2 protein_coding protein_coding MGP_129S1SvImJ_T0021723.1 MGP_129S1SvImJ_G0016393.1 mouse_genomes_project 1 121565448 121773992 - MGP_129S1SvImJ_P0021723 Gli2 protein_coding protein_coding MGP_129S1SvImJ_T0021724.1 MGP_129S1SvImJ_G0016393.1 mouse_genomes_project 1 121584925 121702080 - Gli2 protein_coding processed_transcript MGP_129S1SvImJ_T0099087.1 MGP_129S1SvImJ_G0037154.1 mouse_genomes_project 1 65185651 65185807 - Gm24788 snRNA snRNA MGP_129S1SvImJ_T0012038.1 MGP_129S1SvImJ_G0010127.1 mouse_genomes_project 1 49633160 49633916 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012113.1 MGP_129S1SvImJ_G0010202.1 mouse_genomes_project 1 72568651 72569202 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020219.1 MGP_129S1SvImJ_G0016089.1 mouse_genomes_project 1 63610407 63736965 + MGP_129S1SvImJ_P0020219 Adam23 protein_coding protein_coding MGP_129S1SvImJ_T0020220.1 MGP_129S1SvImJ_G0016089.1 mouse_genomes_project 1 63610411 63760339 + MGP_129S1SvImJ_P0020220 Adam23 protein_coding protein_coding MGP_129S1SvImJ_T0020221.1 MGP_129S1SvImJ_G0016089.1 mouse_genomes_project 1 63610426 63732881 + Adam23 protein_coding retained_intron MGP_129S1SvImJ_T0020222.1 MGP_129S1SvImJ_G0016089.1 mouse_genomes_project 1 63610451 63696811 + Adam23 protein_coding retained_intron MGP_129S1SvImJ_T0020223.1 MGP_129S1SvImJ_G0016089.1 mouse_genomes_project 1 63610728 63756979 + MGP_129S1SvImJ_P0020223 Adam23 protein_coding protein_coding MGP_129S1SvImJ_T0020224.1 MGP_129S1SvImJ_G0016089.1 mouse_genomes_project 1 63610728 63760339 + MGP_129S1SvImJ_P0020224 Adam23 protein_coding protein_coding MGP_129S1SvImJ_T0020225.1 MGP_129S1SvImJ_G0016089.1 mouse_genomes_project 1 63634966 63709489 + Adam23 protein_coding processed_transcript MGP_129S1SvImJ_T0020226.1 MGP_129S1SvImJ_G0016089.1 mouse_genomes_project 1 63658525 63760339 + Adam23 protein_coding processed_transcript MGP_129S1SvImJ_T0020227.1 MGP_129S1SvImJ_G0016089.1 mouse_genomes_project 1 63700938 63704462 + Adam23 protein_coding retained_intron MGP_129S1SvImJ_T0020228.1 MGP_129S1SvImJ_G0016089.1 mouse_genomes_project 1 63719042 63730697 + Adam23 protein_coding retained_intron MGP_129S1SvImJ_T0020229.1 MGP_129S1SvImJ_G0016089.1 mouse_genomes_project 1 63742861 63746249 + Adam23 protein_coding retained_intron MGP_129S1SvImJ_T0020230.1 MGP_129S1SvImJ_G0016089.1 mouse_genomes_project 1 63749088 63756873 + Adam23 protein_coding retained_intron MGP_129S1SvImJ_T0021100.1 MGP_129S1SvImJ_G0016260.1 mouse_genomes_project 1 88542108 88545749 + MGP_129S1SvImJ_P0021100 Chrng protein_coding protein_coding MGP_129S1SvImJ_T0021101.1 MGP_129S1SvImJ_G0016260.1 mouse_genomes_project 1 88543258 88545748 + MGP_129S1SvImJ_P0021101 Chrng protein_coding protein_coding MGP_129S1SvImJ_T0021102.1 MGP_129S1SvImJ_G0016260.1 mouse_genomes_project 1 88543259 88550175 + MGP_129S1SvImJ_P0021102 Chrng protein_coding protein_coding MGP_129S1SvImJ_T0021103.1 MGP_129S1SvImJ_G0016260.1 mouse_genomes_project 1 88543333 88545748 + MGP_129S1SvImJ_P0021103 Chrng protein_coding protein_coding MGP_129S1SvImJ_T0021104.1 MGP_129S1SvImJ_G0016260.1 mouse_genomes_project 1 88543522 88546048 + Chrng protein_coding retained_intron MGP_129S1SvImJ_T0023933.1 MGP_129S1SvImJ_G0016881.1 mouse_genomes_project 1 187541076 187550498 + MGP_129S1SvImJ_P0023933 9130409I23Rik protein_coding protein_coding MGP_129S1SvImJ_T0012091.1 MGP_129S1SvImJ_G0010180.1 mouse_genomes_project 1 64626235 64626453 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000384.1 MGP_129S1SvImJ_G0000326.1 mouse_genomes_project 1 1813497 1814758 - TEC TEC MGP_129S1SvImJ_T0023201.1 MGP_129S1SvImJ_G0016697.1 mouse_genomes_project 1 171268085 171280995 + MGP_129S1SvImJ_P0023201 Creg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023202.1 MGP_129S1SvImJ_G0016697.1 mouse_genomes_project 1 171268085 171280995 + MGP_129S1SvImJ_P0023202 Creg1 protein_coding protein_coding MGP_129S1SvImJ_T0023203.1 MGP_129S1SvImJ_G0016697.1 mouse_genomes_project 1 171274377 171279605 + MGP_129S1SvImJ_P0023203 Creg1 protein_coding protein_coding MGP_129S1SvImJ_T0011944.1 MGP_129S1SvImJ_G0010033.1 mouse_genomes_project 1 20739120 20742645 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024074.1 MGP_129S1SvImJ_G0016913.1 mouse_genomes_project 1 191917185 192005873 + MGP_129S1SvImJ_P0024074 Rab3gap2 protein_coding protein_coding MGP_129S1SvImJ_T0024075.1 MGP_129S1SvImJ_G0016913.1 mouse_genomes_project 1 191917185 192003306 + MGP_129S1SvImJ_P0024075 Rab3gap2 protein_coding protein_coding MGP_129S1SvImJ_T0024076.1 MGP_129S1SvImJ_G0016913.1 mouse_genomes_project 1 191917246 191919516 + Rab3gap2 protein_coding retained_intron MGP_129S1SvImJ_T0024077.1 MGP_129S1SvImJ_G0016913.1 mouse_genomes_project 1 191980768 192005858 + Rab3gap2 protein_coding retained_intron MGP_129S1SvImJ_T0024078.1 MGP_129S1SvImJ_G0016913.1 mouse_genomes_project 1 191980931 192003845 + Rab3gap2 protein_coding retained_intron MGP_129S1SvImJ_T0024079.1 MGP_129S1SvImJ_G0016913.1 mouse_genomes_project 1 191996895 192000816 + Rab3gap2 protein_coding retained_intron MGP_129S1SvImJ_T0019414.1 MGP_129S1SvImJ_G0015938.1 mouse_genomes_project 1 36050360 36059215 + MGP_129S1SvImJ_P0019414 Unc50 protein_coding protein_coding MGP_129S1SvImJ_T0019415.1 MGP_129S1SvImJ_G0015938.1 mouse_genomes_project 1 36050391 36059355 + MGP_129S1SvImJ_P0019415 Unc50 protein_coding protein_coding MGP_129S1SvImJ_T0019416.1 MGP_129S1SvImJ_G0015938.1 mouse_genomes_project 1 36050398 36057709 + MGP_129S1SvImJ_P0019416 Unc50 protein_coding protein_coding MGP_129S1SvImJ_T0019417.1 MGP_129S1SvImJ_G0015938.1 mouse_genomes_project 1 36050407 36057501 + MGP_129S1SvImJ_P0019417 Unc50 protein_coding protein_coding MGP_129S1SvImJ_T0019418.1 MGP_129S1SvImJ_G0015938.1 mouse_genomes_project 1 36050423 36059218 + MGP_129S1SvImJ_P0019418 Unc50 protein_coding protein_coding MGP_129S1SvImJ_T0019419.1 MGP_129S1SvImJ_G0015938.1 mouse_genomes_project 1 36050429 36051776 + MGP_129S1SvImJ_P0019419 Unc50 protein_coding protein_coding MGP_129S1SvImJ_T0019420.1 MGP_129S1SvImJ_G0015938.1 mouse_genomes_project 1 36051565 36057843 + Unc50 protein_coding retained_intron MGP_129S1SvImJ_T0022764.1 MGP_129S1SvImJ_G0016615.1 mouse_genomes_project 1 160635347 160680397 - MGP_129S1SvImJ_P0022764 Lhx4 protein_coding protein_coding MGP_129S1SvImJ_T0022765.1 MGP_129S1SvImJ_G0016615.1 mouse_genomes_project 1 160641925 160690083 - MGP_129S1SvImJ_P0022765 Lhx4 protein_coding protein_coding MGP_129S1SvImJ_T0023360.1 MGP_129S1SvImJ_G0016738.1 mouse_genomes_project 1 176705570 176728251 - MGP_129S1SvImJ_P0023360 Fcgr2b protein_coding protein_coding MGP_129S1SvImJ_T0023361.1 MGP_129S1SvImJ_G0016738.1 mouse_genomes_project 1 176708465 176728251 - MGP_129S1SvImJ_P0023361 Fcgr2b protein_coding protein_coding MGP_129S1SvImJ_T0023362.1 MGP_129S1SvImJ_G0016738.1 mouse_genomes_project 1 176708639 176709536 - Fcgr2b protein_coding processed_transcript MGP_129S1SvImJ_T0023363.1 MGP_129S1SvImJ_G0016738.1 mouse_genomes_project 1 176708674 176728687 - MGP_129S1SvImJ_P0023363 Fcgr2b protein_coding protein_coding MGP_129S1SvImJ_T0023364.1 MGP_129S1SvImJ_G0016738.1 mouse_genomes_project 1 176708898 176728251 - MGP_129S1SvImJ_P0023364 Fcgr2b protein_coding protein_coding MGP_129S1SvImJ_T0023365.1 MGP_129S1SvImJ_G0016738.1 mouse_genomes_project 1 176712193 176728251 - Fcgr2b protein_coding retained_intron MGP_129S1SvImJ_T0023366.1 MGP_129S1SvImJ_G0016738.1 mouse_genomes_project 1 176717119 176728251 - Fcgr2b protein_coding retained_intron MGP_129S1SvImJ_T0000794.1 MGP_129S1SvImJ_G0000730.1 mouse_genomes_project 1 188537165 188540409 - TEC TEC MGP_129S1SvImJ_T0011932.1 MGP_129S1SvImJ_G0010021.1 mouse_genomes_project 1 16936334 16936806 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000707.1 MGP_129S1SvImJ_G0000644.1 mouse_genomes_project 1 157064174 157064523 - TEC TEC MGP_129S1SvImJ_T0006060.1 MGP_129S1SvImJ_G0005075.1 mouse_genomes_project 1 193290827 193340043 - A730004F24Rik lincRNA lincRNA MGP_129S1SvImJ_T0006061.1 MGP_129S1SvImJ_G0005075.1 mouse_genomes_project 1 193290871 193340252 - A730004F24Rik lincRNA lincRNA MGP_129S1SvImJ_T0005693.1 MGP_129S1SvImJ_G0004793.1 mouse_genomes_project 1 31569410 31572112 - Gm37591 lincRNA lincRNA MGP_129S1SvImJ_T0018986.1 MGP_129S1SvImJ_G0015852.1 mouse_genomes_project 1 13536908 13552812 - MGP_129S1SvImJ_P0018986 4930444P10Rik protein_coding protein_coding MGP_129S1SvImJ_T0018987.1 MGP_129S1SvImJ_G0015852.1 mouse_genomes_project 1 13536908 13566860 - MGP_129S1SvImJ_P0018987 4930444P10Rik protein_coding protein_coding MGP_129S1SvImJ_T0018988.1 MGP_129S1SvImJ_G0015852.1 mouse_genomes_project 1 13536908 13566860 - MGP_129S1SvImJ_P0018988 4930444P10Rik protein_coding protein_coding MGP_129S1SvImJ_T0002868.1 MGP_129S1SvImJ_G0002713.1 mouse_genomes_project 1 88606614 88607308 - Efhd1os antisense antisense MGP_129S1SvImJ_T0011988.1 MGP_129S1SvImJ_G0010077.1 mouse_genomes_project 1 33435579 33435814 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012011.1 MGP_129S1SvImJ_G0010100.1 mouse_genomes_project 1 43866289 43866780 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022220.1 MGP_129S1SvImJ_G0016506.1 mouse_genomes_project 1 138064056 138066451 + Cyb5r1 protein_coding processed_transcript MGP_129S1SvImJ_T0022221.1 MGP_129S1SvImJ_G0016506.1 mouse_genomes_project 1 138064241 138070199 + MGP_129S1SvImJ_P0022221 Cyb5r1 protein_coding protein_coding MGP_129S1SvImJ_T0022222.1 MGP_129S1SvImJ_G0016506.1 mouse_genomes_project 1 138064241 138070195 + MGP_129S1SvImJ_P0022222 Cyb5r1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022223.1 MGP_129S1SvImJ_G0016506.1 mouse_genomes_project 1 138064455 138066063 + Cyb5r1 protein_coding processed_transcript MGP_129S1SvImJ_T0022224.1 MGP_129S1SvImJ_G0016506.1 mouse_genomes_project 1 138064463 138066055 + Cyb5r1 protein_coding processed_transcript MGP_129S1SvImJ_T0022225.1 MGP_129S1SvImJ_G0016506.1 mouse_genomes_project 1 138064464 138068126 + MGP_129S1SvImJ_P0022225 Cyb5r1 protein_coding protein_coding MGP_129S1SvImJ_T0022226.1 MGP_129S1SvImJ_G0016506.1 mouse_genomes_project 1 138064480 138067327 + Cyb5r1 protein_coding retained_intron MGP_129S1SvImJ_T0022227.1 MGP_129S1SvImJ_G0016506.1 mouse_genomes_project 1 138064488 138068460 + Cyb5r1 protein_coding retained_intron MGP_129S1SvImJ_T0022228.1 MGP_129S1SvImJ_G0016506.1 mouse_genomes_project 1 138064773 138069430 + MGP_129S1SvImJ_P0022228 Cyb5r1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022229.1 MGP_129S1SvImJ_G0016506.1 mouse_genomes_project 1 138064773 138066128 + MGP_129S1SvImJ_P0022229 Cyb5r1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0002841.1 MGP_129S1SvImJ_G0002694.1 mouse_genomes_project 1 62834388 62837727 - Gm29083 antisense antisense MGP_129S1SvImJ_T0003024.1 MGP_129S1SvImJ_G0002834.1 mouse_genomes_project 1 200385763 200386887 - Gm37650 antisense antisense MGP_129S1SvImJ_T0002782.1 MGP_129S1SvImJ_G0002648.1 mouse_genomes_project 1 15163610 15197930 - Gm28154 antisense antisense MGP_129S1SvImJ_T0011281.1 MGP_129S1SvImJ_G0009397.1 mouse_genomes_project 1 197461682 197461995 - Gm23153 misc_RNA misc_RNA MGP_129S1SvImJ_T0012314.1 MGP_129S1SvImJ_G0010403.1 mouse_genomes_project 1 161156089 161156290 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019826.1 MGP_129S1SvImJ_G0016020.1 mouse_genomes_project 1 52870837 52897879 - MGP_129S1SvImJ_P0019826 Gm28551 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0005685.1 MGP_129S1SvImJ_G0004786.1 mouse_genomes_project 1 21374927 21397301 + Gm28822 lincRNA lincRNA MGP_129S1SvImJ_T0022417.1 MGP_129S1SvImJ_G0016545.1 mouse_genomes_project 1 142071540 142129435 - Ptprc protein_coding retained_intron MGP_129S1SvImJ_T0022418.1 MGP_129S1SvImJ_G0016545.1 mouse_genomes_project 1 142072086 142194191 - MGP_129S1SvImJ_P0022418 Ptprc protein_coding protein_coding MGP_129S1SvImJ_T0022419.1 MGP_129S1SvImJ_G0016545.1 mouse_genomes_project 1 142072092 142194152 - MGP_129S1SvImJ_P0022419 Ptprc protein_coding protein_coding MGP_129S1SvImJ_T0022420.1 MGP_129S1SvImJ_G0016545.1 mouse_genomes_project 1 142072099 142194185 - MGP_129S1SvImJ_P0022420 Ptprc protein_coding protein_coding MGP_129S1SvImJ_T0022421.1 MGP_129S1SvImJ_G0016545.1 mouse_genomes_project 1 142125023 142128468 - Ptprc protein_coding retained_intron MGP_129S1SvImJ_T0022422.1 MGP_129S1SvImJ_G0016545.1 mouse_genomes_project 1 142125245 142194119 - MGP_129S1SvImJ_P0022422 Ptprc protein_coding protein_coding MGP_129S1SvImJ_T0022423.1 MGP_129S1SvImJ_G0016545.1 mouse_genomes_project 1 142130330 142133714 - Ptprc protein_coding retained_intron MGP_129S1SvImJ_T0022424.1 MGP_129S1SvImJ_G0016545.1 mouse_genomes_project 1 142130831 142194185 - MGP_129S1SvImJ_P0022424 Ptprc protein_coding protein_coding MGP_129S1SvImJ_T0022425.1 MGP_129S1SvImJ_G0016545.1 mouse_genomes_project 1 142132466 142194184 - Ptprc protein_coding retained_intron MGP_129S1SvImJ_T0022426.1 MGP_129S1SvImJ_G0016545.1 mouse_genomes_project 1 142139246 142194181 - Ptprc protein_coding retained_intron MGP_129S1SvImJ_T0022427.1 MGP_129S1SvImJ_G0016545.1 mouse_genomes_project 1 142143237 142194593 - Ptprc protein_coding retained_intron MGP_129S1SvImJ_T0022428.1 MGP_129S1SvImJ_G0016545.1 mouse_genomes_project 1 142190861 142194074 - Ptprc protein_coding retained_intron MGP_129S1SvImJ_T0022429.1 MGP_129S1SvImJ_G0016545.1 mouse_genomes_project 1 142191628 142194134 - Ptprc protein_coding retained_intron MGP_129S1SvImJ_T0005841.1 MGP_129S1SvImJ_G0004900.1 mouse_genomes_project 1 90088524 90092385 + lincRNA lincRNA MGP_129S1SvImJ_T0020699.1 MGP_129S1SvImJ_G0016180.1 mouse_genomes_project 1 75784224 75787784 - MGP_129S1SvImJ_P0020699 A630095N17Rik protein_coding protein_coding MGP_129S1SvImJ_T0020700.1 MGP_129S1SvImJ_G0016180.1 mouse_genomes_project 1 75784385 75796194 - MGP_129S1SvImJ_P0020700 A630095N17Rik protein_coding protein_coding MGP_129S1SvImJ_T0020701.1 MGP_129S1SvImJ_G0016180.1 mouse_genomes_project 1 75794966 75796206 - MGP_129S1SvImJ_P0020701 A630095N17Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020598.1 MGP_129S1SvImJ_G0016164.1 mouse_genomes_project 1 75466785 75469584 + MGP_129S1SvImJ_P0020598 Cdk5r2 protein_coding protein_coding MGP_129S1SvImJ_T0021619.1 MGP_129S1SvImJ_G0016371.1 mouse_genomes_project 1 108706935 108894106 - MGP_129S1SvImJ_P0021619 Bcl2 protein_coding protein_coding MGP_129S1SvImJ_T0021620.1 MGP_129S1SvImJ_G0016371.1 mouse_genomes_project 1 108890175 108893011 - MGP_129S1SvImJ_P0021620 Bcl2 protein_coding protein_coding MGP_129S1SvImJ_T0011282.1 MGP_129S1SvImJ_G0009398.1 mouse_genomes_project 1 198225421 198225529 + Gm24748 misc_RNA misc_RNA MGP_129S1SvImJ_T0012232.1 MGP_129S1SvImJ_G0010321.1 mouse_genomes_project 1 123645528 123645738 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012344.1 MGP_129S1SvImJ_G0010433.1 mouse_genomes_project 1 175084940 175085282 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102043.1 MGP_129S1SvImJ_G0039878.1 mouse_genomes_project 1 18811586 18819913 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0021872.1 MGP_129S1SvImJ_G0016426.1 mouse_genomes_project 1 131325229 131409097 + R3hdm1 protein_coding retained_intron MGP_129S1SvImJ_T0021873.1 MGP_129S1SvImJ_G0016426.1 mouse_genomes_project 1 131325249 131405090 + MGP_129S1SvImJ_P0021873 R3hdm1 protein_coding protein_coding MGP_129S1SvImJ_T0021874.1 MGP_129S1SvImJ_G0016426.1 mouse_genomes_project 1 131325252 131414797 + MGP_129S1SvImJ_P0021874 R3hdm1 protein_coding protein_coding MGP_129S1SvImJ_T0021875.1 MGP_129S1SvImJ_G0016426.1 mouse_genomes_project 1 131325252 131464815 + MGP_129S1SvImJ_P0021875 R3hdm1 protein_coding protein_coding MGP_129S1SvImJ_T0021876.1 MGP_129S1SvImJ_G0016426.1 mouse_genomes_project 1 131325259 131333647 + R3hdm1 protein_coding retained_intron MGP_129S1SvImJ_T0021877.1 MGP_129S1SvImJ_G0016426.1 mouse_genomes_project 1 131368439 131412838 + MGP_129S1SvImJ_P0021877 R3hdm1 protein_coding protein_coding MGP_129S1SvImJ_T0021878.1 MGP_129S1SvImJ_G0016426.1 mouse_genomes_project 1 131368462 131379815 + MGP_129S1SvImJ_P0021878 R3hdm1 protein_coding protein_coding MGP_129S1SvImJ_T0021879.1 MGP_129S1SvImJ_G0016426.1 mouse_genomes_project 1 131378302 131405143 + MGP_129S1SvImJ_P0021879 R3hdm1 protein_coding protein_coding MGP_129S1SvImJ_T0021880.1 MGP_129S1SvImJ_G0016426.1 mouse_genomes_project 1 131397607 131404103 + R3hdm1 protein_coding retained_intron MGP_129S1SvImJ_T0021881.1 MGP_129S1SvImJ_G0016426.1 mouse_genomes_project 1 131400642 131405078 + R3hdm1 protein_coding retained_intron MGP_129S1SvImJ_T0021882.1 MGP_129S1SvImJ_G0016426.1 mouse_genomes_project 1 131402796 131414597 + R3hdm1 protein_coding retained_intron MGP_129S1SvImJ_T0021883.1 MGP_129S1SvImJ_G0016426.1 mouse_genomes_project 1 131405103 131420510 + MGP_129S1SvImJ_P0021883 R3hdm1 protein_coding protein_coding MGP_129S1SvImJ_T0021884.1 MGP_129S1SvImJ_G0016426.1 mouse_genomes_project 1 131407705 131438160 + MGP_129S1SvImJ_P0021884 R3hdm1 protein_coding protein_coding MGP_129S1SvImJ_T0021885.1 MGP_129S1SvImJ_G0016426.1 mouse_genomes_project 1 131418648 131423550 + R3hdm1 protein_coding retained_intron MGP_129S1SvImJ_T0021886.1 MGP_129S1SvImJ_G0016426.1 mouse_genomes_project 1 131433929 131464814 + R3hdm1 protein_coding retained_intron MGP_129S1SvImJ_T0021887.1 MGP_129S1SvImJ_G0016426.1 mouse_genomes_project 1 131462157 131464815 + R3hdm1 protein_coding retained_intron MGP_129S1SvImJ_T0000812.1 MGP_129S1SvImJ_G0000747.1 mouse_genomes_project 1 194491119 194491612 - TEC TEC MGP_129S1SvImJ_T0019721.1 MGP_129S1SvImJ_G0016004.1 mouse_genomes_project 1 51246494 51415537 - MGP_129S1SvImJ_P0019721 Myo1b protein_coding protein_coding MGP_129S1SvImJ_T0019722.1 MGP_129S1SvImJ_G0016004.1 mouse_genomes_project 1 51246710 51415407 - MGP_129S1SvImJ_P0019722 Myo1b protein_coding protein_coding MGP_129S1SvImJ_T0019723.1 MGP_129S1SvImJ_G0016004.1 mouse_genomes_project 1 51246717 51406781 - MGP_129S1SvImJ_P0019723 Myo1b protein_coding protein_coding MGP_129S1SvImJ_T0019724.1 MGP_129S1SvImJ_G0016004.1 mouse_genomes_project 1 51246722 51415394 - MGP_129S1SvImJ_P0019724 Myo1b protein_coding protein_coding MGP_129S1SvImJ_T0019725.1 MGP_129S1SvImJ_G0016004.1 mouse_genomes_project 1 51262552 51266679 - Myo1b protein_coding retained_intron MGP_129S1SvImJ_T0019726.1 MGP_129S1SvImJ_G0016004.1 mouse_genomes_project 1 51264730 51273081 - Myo1b protein_coding processed_transcript MGP_129S1SvImJ_T0019727.1 MGP_129S1SvImJ_G0016004.1 mouse_genomes_project 1 51264798 51269602 - Myo1b protein_coding retained_intron MGP_129S1SvImJ_T0019728.1 MGP_129S1SvImJ_G0016004.1 mouse_genomes_project 1 51269085 51278645 - Myo1b protein_coding processed_transcript MGP_129S1SvImJ_T0019729.1 MGP_129S1SvImJ_G0016004.1 mouse_genomes_project 1 51278601 51297433 - Myo1b protein_coding processed_transcript MGP_129S1SvImJ_T0019730.1 MGP_129S1SvImJ_G0016004.1 mouse_genomes_project 1 51281936 51284435 - Myo1b protein_coding retained_intron MGP_129S1SvImJ_T0019731.1 MGP_129S1SvImJ_G0016004.1 mouse_genomes_project 1 51299621 51395980 - MGP_129S1SvImJ_P0019731 Myo1b protein_coding protein_coding MGP_129S1SvImJ_T0019732.1 MGP_129S1SvImJ_G0016004.1 mouse_genomes_project 1 51301545 51322492 - Myo1b protein_coding processed_transcript MGP_129S1SvImJ_T0019733.1 MGP_129S1SvImJ_G0016004.1 mouse_genomes_project 1 51312637 51415378 - Myo1b protein_coding retained_intron MGP_129S1SvImJ_T0019734.1 MGP_129S1SvImJ_G0016004.1 mouse_genomes_project 1 51337170 51353857 - Myo1b protein_coding processed_transcript MGP_129S1SvImJ_T0019735.1 MGP_129S1SvImJ_G0016004.1 mouse_genomes_project 1 51365135 51415387 - Myo1b protein_coding retained_intron MGP_129S1SvImJ_T0020366.1 MGP_129S1SvImJ_G0016119.1 mouse_genomes_project 1 67391666 67500837 + MGP_129S1SvImJ_P0020366 Cps1 protein_coding protein_coding MGP_129S1SvImJ_T0100351.1 MGP_129S1SvImJ_G0038418.1 mouse_genomes_project 1 87606093 87606173 - Gm24148 snoRNA snoRNA MGP_129S1SvImJ_T0022325.1 MGP_129S1SvImJ_G0016528.1 mouse_genomes_project 1 139562137 139570788 + Tnni1 protein_coding processed_transcript MGP_129S1SvImJ_T0022326.1 MGP_129S1SvImJ_G0016528.1 mouse_genomes_project 1 139568691 139591315 + MGP_129S1SvImJ_P0022326 Tnni1 protein_coding protein_coding MGP_129S1SvImJ_T0022327.1 MGP_129S1SvImJ_G0016528.1 mouse_genomes_project 1 139585098 139596713 + MGP_129S1SvImJ_P0022327 Tnni1 protein_coding protein_coding MGP_129S1SvImJ_T0022328.1 MGP_129S1SvImJ_G0016528.1 mouse_genomes_project 1 139585117 139596355 + Tnni1 protein_coding processed_transcript MGP_129S1SvImJ_T0022329.1 MGP_129S1SvImJ_G0016528.1 mouse_genomes_project 1 139585117 139596713 + MGP_129S1SvImJ_P0022329 Tnni1 protein_coding protein_coding MGP_129S1SvImJ_T0022330.1 MGP_129S1SvImJ_G0016528.1 mouse_genomes_project 1 139585207 139596421 + MGP_129S1SvImJ_P0022330 Tnni1 protein_coding protein_coding MGP_129S1SvImJ_T0022331.1 MGP_129S1SvImJ_G0016528.1 mouse_genomes_project 1 139585215 139595462 + MGP_129S1SvImJ_P0022331 Tnni1 protein_coding protein_coding MGP_129S1SvImJ_T0022332.1 MGP_129S1SvImJ_G0016528.1 mouse_genomes_project 1 139585547 139596713 + MGP_129S1SvImJ_P0022332 Tnni1 protein_coding protein_coding MGP_129S1SvImJ_T0022333.1 MGP_129S1SvImJ_G0016528.1 mouse_genomes_project 1 139590749 139595636 + MGP_129S1SvImJ_P0022333 Tnni1 protein_coding protein_coding MGP_129S1SvImJ_T0005692.1 MGP_129S1SvImJ_G0004792.1 mouse_genomes_project 1 29266824 29269944 + lincRNA lincRNA MGP_129S1SvImJ_T0005784.1 MGP_129S1SvImJ_G0004857.1 mouse_genomes_project 1 64795079 64803326 + Gm28982 lincRNA lincRNA MGP_129S1SvImJ_T0019092.1 MGP_129S1SvImJ_G0015880.1 mouse_genomes_project 1 19065631 19068285 + MGP_129S1SvImJ_P0019092 Khdc1b protein_coding protein_coding MGP_129S1SvImJ_T0022201.1 MGP_129S1SvImJ_G0016500.1 mouse_genomes_project 1 137836265 137844051 + MGP_129S1SvImJ_P0022201 Mybph protein_coding protein_coding MGP_129S1SvImJ_T0022202.1 MGP_129S1SvImJ_G0016500.1 mouse_genomes_project 1 137836274 137844052 + MGP_129S1SvImJ_P0022202 Mybph protein_coding protein_coding MGP_129S1SvImJ_T0012315.1 MGP_129S1SvImJ_G0010404.1 mouse_genomes_project 1 162422567 162422969 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099115.1 MGP_129S1SvImJ_G0037182.1 mouse_genomes_project 1 134485823 134485917 - Gm25549 snRNA snRNA MGP_129S1SvImJ_T0020720.1 MGP_129S1SvImJ_G0016183.1 mouse_genomes_project 1 75838472 75844703 - MGP_129S1SvImJ_P0020720 Resp18 protein_coding protein_coding MGP_129S1SvImJ_T0020721.1 MGP_129S1SvImJ_G0016183.1 mouse_genomes_project 1 75838474 75840537 - Resp18 protein_coding retained_intron MGP_129S1SvImJ_T0020722.1 MGP_129S1SvImJ_G0016183.1 mouse_genomes_project 1 75838584 75844604 - MGP_129S1SvImJ_P0020722 Resp18 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020723.1 MGP_129S1SvImJ_G0016183.1 mouse_genomes_project 1 75840343 75844572 - Resp18 protein_coding retained_intron MGP_129S1SvImJ_T0021894.1 MGP_129S1SvImJ_G0016429.1 mouse_genomes_project 1 131572373 131602006 - MGP_129S1SvImJ_P0021894 Mcm6 protein_coding protein_coding MGP_129S1SvImJ_T0021895.1 MGP_129S1SvImJ_G0016429.1 mouse_genomes_project 1 131572376 131601989 - MGP_129S1SvImJ_P0021895 Mcm6 protein_coding protein_coding MGP_129S1SvImJ_T0021896.1 MGP_129S1SvImJ_G0016429.1 mouse_genomes_project 1 131580207 131586866 - Mcm6 protein_coding retained_intron MGP_129S1SvImJ_T0021897.1 MGP_129S1SvImJ_G0016429.1 mouse_genomes_project 1 131581986 131584264 - Mcm6 protein_coding retained_intron MGP_129S1SvImJ_T0000755.1 MGP_129S1SvImJ_G0000692.1 mouse_genomes_project 1 170956533 170957567 + TEC TEC MGP_129S1SvImJ_T0024310.1 MGP_129S1SvImJ_G0016958.1 mouse_genomes_project 1 200241889 200260790 + MGP_129S1SvImJ_P0024310 Irf6 protein_coding protein_coding MGP_129S1SvImJ_T0024311.1 MGP_129S1SvImJ_G0016958.1 mouse_genomes_project 1 200241932 200255635 + Irf6 protein_coding retained_intron MGP_129S1SvImJ_T0024312.1 MGP_129S1SvImJ_G0016958.1 mouse_genomes_project 1 200245435 200252948 + Irf6 protein_coding retained_intron MGP_129S1SvImJ_T0024314.1 MGP_129S1SvImJ_G0016958.1 mouse_genomes_project 1 200257269 200258256 + Irf6 protein_coding retained_intron MGP_129S1SvImJ_T0000437.1 MGP_129S1SvImJ_G0000377.1 mouse_genomes_project 1 23252286 23255541 - TEC TEC MGP_129S1SvImJ_T0019953.1 MGP_129S1SvImJ_G0016045.1 mouse_genomes_project 1 57863977 57944970 + MGP_129S1SvImJ_P0019953 Aox1 protein_coding protein_coding MGP_129S1SvImJ_T0019954.1 MGP_129S1SvImJ_G0016045.1 mouse_genomes_project 1 57864010 57908564 + Aox1 protein_coding retained_intron MGP_129S1SvImJ_T0022814.1 MGP_129S1SvImJ_G0016624.1 mouse_genomes_project 1 161381392 161432231 - MGP_129S1SvImJ_P0022814 Soat1 protein_coding protein_coding MGP_129S1SvImJ_T0022815.1 MGP_129S1SvImJ_G0016624.1 mouse_genomes_project 1 161386645 161423692 - MGP_129S1SvImJ_P0022815 Soat1 protein_coding protein_coding MGP_129S1SvImJ_T0022816.1 MGP_129S1SvImJ_G0016624.1 mouse_genomes_project 1 161387579 161389428 - Soat1 protein_coding retained_intron MGP_129S1SvImJ_T0022817.1 MGP_129S1SvImJ_G0016624.1 mouse_genomes_project 1 161387837 161389874 - Soat1 protein_coding retained_intron MGP_129S1SvImJ_T0022818.1 MGP_129S1SvImJ_G0016624.1 mouse_genomes_project 1 161396963 161432140 - Soat1 protein_coding retained_intron MGP_129S1SvImJ_T0022819.1 MGP_129S1SvImJ_G0016624.1 mouse_genomes_project 1 161397389 161432196 - MGP_129S1SvImJ_P0022819 Soat1 protein_coding protein_coding MGP_129S1SvImJ_T0022820.1 MGP_129S1SvImJ_G0016624.1 mouse_genomes_project 1 161403225 161432097 - Soat1 protein_coding retained_intron MGP_129S1SvImJ_T0022821.1 MGP_129S1SvImJ_G0016624.1 mouse_genomes_project 1 161403458 161432164 - MGP_129S1SvImJ_P0022821 Soat1 protein_coding protein_coding MGP_129S1SvImJ_T0005789.1 MGP_129S1SvImJ_G0004862.1 mouse_genomes_project 1 69795300 69798333 + Gm28497 lincRNA lincRNA MGP_129S1SvImJ_T0021290.1 MGP_129S1SvImJ_G0016301.1 mouse_genomes_project 1 92674049 92676741 + Rbm44 protein_coding retained_intron MGP_129S1SvImJ_T0021291.1 MGP_129S1SvImJ_G0016301.1 mouse_genomes_project 1 92674061 92681714 + MGP_129S1SvImJ_P0021291 Rbm44 protein_coding protein_coding MGP_129S1SvImJ_T0021292.1 MGP_129S1SvImJ_G0016301.1 mouse_genomes_project 1 92674063 92698548 + MGP_129S1SvImJ_P0021292 Rbm44 protein_coding protein_coding MGP_129S1SvImJ_T0021293.1 MGP_129S1SvImJ_G0016301.1 mouse_genomes_project 1 92696381 92698046 + Rbm44 protein_coding retained_intron MGP_129S1SvImJ_T0022686.1 MGP_129S1SvImJ_G0016599.1 mouse_genomes_project 1 158496347 158544426 + MGP_129S1SvImJ_P0022686 Rgs8 protein_coding protein_coding MGP_129S1SvImJ_T0022687.1 MGP_129S1SvImJ_G0016599.1 mouse_genomes_project 1 158504397 158535079 + MGP_129S1SvImJ_P0022687 Rgs8 protein_coding protein_coding MGP_129S1SvImJ_T0022688.1 MGP_129S1SvImJ_G0016599.1 mouse_genomes_project 1 158507800 158537088 + MGP_129S1SvImJ_P0022688 Rgs8 protein_coding protein_coding MGP_129S1SvImJ_T0022689.1 MGP_129S1SvImJ_G0016599.1 mouse_genomes_project 1 158508458 158536880 + MGP_129S1SvImJ_P0022689 Rgs8 protein_coding protein_coding MGP_129S1SvImJ_T0022690.1 MGP_129S1SvImJ_G0016599.1 mouse_genomes_project 1 158508496 158539681 + MGP_129S1SvImJ_P0022690 Rgs8 protein_coding protein_coding MGP_129S1SvImJ_T0022691.1 MGP_129S1SvImJ_G0016599.1 mouse_genomes_project 1 158508777 158535129 + MGP_129S1SvImJ_P0022691 Rgs8 protein_coding protein_coding MGP_129S1SvImJ_T0022692.1 MGP_129S1SvImJ_G0016599.1 mouse_genomes_project 1 158508841 158535134 + MGP_129S1SvImJ_P0022692 Rgs8 protein_coding protein_coding MGP_129S1SvImJ_T0022693.1 MGP_129S1SvImJ_G0016599.1 mouse_genomes_project 1 158508857 158537049 + MGP_129S1SvImJ_P0022693 Rgs8 protein_coding protein_coding MGP_129S1SvImJ_T0022694.1 MGP_129S1SvImJ_G0016599.1 mouse_genomes_project 1 158508893 158541770 + MGP_129S1SvImJ_P0022694 Rgs8 protein_coding protein_coding MGP_129S1SvImJ_T0022695.1 MGP_129S1SvImJ_G0016599.1 mouse_genomes_project 1 158510673 158514685 + Rgs8 protein_coding processed_transcript MGP_129S1SvImJ_T0023256.1 MGP_129S1SvImJ_G0016707.1 mouse_genomes_project 1 172148570 172167110 - MGP_129S1SvImJ_P0023256 Gm4847 protein_coding protein_coding MGP_129S1SvImJ_T0011280.1 MGP_129S1SvImJ_G0009396.1 mouse_genomes_project 1 191556093 191556368 - Gm23780 misc_RNA misc_RNA MGP_129S1SvImJ_T0002956.1 MGP_129S1SvImJ_G0002780.1 mouse_genomes_project 1 168674013 168680714 + Gm20471 antisense antisense MGP_129S1SvImJ_T0019782.1 MGP_129S1SvImJ_G0016010.1 mouse_genomes_project 1 52175978 52247637 - MGP_129S1SvImJ_P0019782 Mfsd6 protein_coding protein_coding MGP_129S1SvImJ_T0019783.1 MGP_129S1SvImJ_G0016010.1 mouse_genomes_project 1 52175990 52247456 - MGP_129S1SvImJ_P0019783 Mfsd6 protein_coding protein_coding MGP_129S1SvImJ_T0019784.1 MGP_129S1SvImJ_G0016010.1 mouse_genomes_project 1 52177127 52179991 - Mfsd6 protein_coding retained_intron MGP_129S1SvImJ_T0019785.1 MGP_129S1SvImJ_G0016010.1 mouse_genomes_project 1 52179678 52247637 - MGP_129S1SvImJ_P0019785 Mfsd6 protein_coding protein_coding MGP_129S1SvImJ_T0019786.1 MGP_129S1SvImJ_G0016010.1 mouse_genomes_project 1 52180595 52189784 - Mfsd6 protein_coding processed_transcript MGP_129S1SvImJ_T0019787.1 MGP_129S1SvImJ_G0016010.1 mouse_genomes_project 1 52196055 52247533 - Mfsd6 protein_coding retained_intron MGP_129S1SvImJ_T0000395.1 MGP_129S1SvImJ_G0000337.1 mouse_genomes_project 1 6484127 6491458 + TEC TEC MGP_129S1SvImJ_T0100402.1 MGP_129S1SvImJ_G0038469.1 mouse_genomes_project 1 193469141 193469276 + Gm26169 snoRNA snoRNA MGP_129S1SvImJ_T0002864.1 MGP_129S1SvImJ_G0002709.1 mouse_genomes_project 1 87156187 87160287 - Gm28884 antisense antisense MGP_129S1SvImJ_T0019982.1 MGP_129S1SvImJ_G0016051.1 mouse_genomes_project 1 58297121 58313112 - MGP_129S1SvImJ_P0019982 Ppil3 protein_coding protein_coding MGP_129S1SvImJ_T0019983.1 MGP_129S1SvImJ_G0016051.1 mouse_genomes_project 1 58297121 58313107 - MGP_129S1SvImJ_P0019983 Ppil3 protein_coding protein_coding MGP_129S1SvImJ_T0019984.1 MGP_129S1SvImJ_G0016051.1 mouse_genomes_project 1 58297124 58313164 - MGP_129S1SvImJ_P0019984 Ppil3 protein_coding protein_coding MGP_129S1SvImJ_T0019985.1 MGP_129S1SvImJ_G0016051.1 mouse_genomes_project 1 58297145 58298310 - Ppil3 protein_coding processed_transcript MGP_129S1SvImJ_T0019986.1 MGP_129S1SvImJ_G0016051.1 mouse_genomes_project 1 58299910 58313047 - MGP_129S1SvImJ_P0019986 Ppil3 protein_coding protein_coding MGP_129S1SvImJ_T0019987.1 MGP_129S1SvImJ_G0016051.1 mouse_genomes_project 1 58300538 58313117 - MGP_129S1SvImJ_P0019987 Ppil3 protein_coding protein_coding MGP_129S1SvImJ_T0019988.1 MGP_129S1SvImJ_G0016051.1 mouse_genomes_project 1 58300542 58313160 - MGP_129S1SvImJ_P0019988 Ppil3 protein_coding protein_coding MGP_129S1SvImJ_T0019989.1 MGP_129S1SvImJ_G0016051.1 mouse_genomes_project 1 58305150 58312854 - Ppil3 protein_coding retained_intron MGP_129S1SvImJ_T0019990.1 MGP_129S1SvImJ_G0016051.1 mouse_genomes_project 1 58305809 58307944 - Ppil3 protein_coding retained_intron MGP_129S1SvImJ_T0022214.1 MGP_129S1SvImJ_G0016504.1 mouse_genomes_project 1 138002485 138019360 - MGP_129S1SvImJ_P0022214 Tmem183a protein_coding protein_coding MGP_129S1SvImJ_T0022215.1 MGP_129S1SvImJ_G0016504.1 mouse_genomes_project 1 138004070 138019322 - MGP_129S1SvImJ_P0022215 Tmem183a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022216.1 MGP_129S1SvImJ_G0016504.1 mouse_genomes_project 1 138004298 138007677 - Tmem183a protein_coding retained_intron MGP_129S1SvImJ_T0022217.1 MGP_129S1SvImJ_G0016504.1 mouse_genomes_project 1 138012813 138019334 - Tmem183a protein_coding retained_intron MGP_129S1SvImJ_T0022218.1 MGP_129S1SvImJ_G0016504.1 mouse_genomes_project 1 138013079 138019071 - MGP_129S1SvImJ_P0022218 Tmem183a protein_coding protein_coding MGP_129S1SvImJ_T0002821.1 MGP_129S1SvImJ_G0002679.1 mouse_genomes_project 1 50635463 50638397 - Gm28319 antisense antisense MGP_129S1SvImJ_T0020899.1 MGP_129S1SvImJ_G0016216.1 mouse_genomes_project 1 83363850 83499024 - MGP_129S1SvImJ_P0020899 Col4a4 protein_coding protein_coding MGP_129S1SvImJ_T0020900.1 MGP_129S1SvImJ_G0016216.1 mouse_genomes_project 1 83372135 83484110 - MGP_129S1SvImJ_P0020900 Col4a4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0020901.1 MGP_129S1SvImJ_G0016216.1 mouse_genomes_project 1 83454083 83498967 - Col4a4 protein_coding retained_intron MGP_129S1SvImJ_T0011930.1 MGP_129S1SvImJ_G0010019.1 mouse_genomes_project 1 16639499 16639611 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011920.1 MGP_129S1SvImJ_G0010009.1 mouse_genomes_project 1 14175029 14175712 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009575.1 MGP_129S1SvImJ_G0007691.1 mouse_genomes_project 1 192032779 192032891 + Mir215 miRNA miRNA MGP_129S1SvImJ_T0002994.1 MGP_129S1SvImJ_G0002812.1 mouse_genomes_project 1 192167519 192181038 - 9630028B13Rik antisense antisense MGP_129S1SvImJ_T0002809.1 MGP_129S1SvImJ_G0002669.1 mouse_genomes_project 1 37585217 37588409 + Gm37707 antisense antisense MGP_129S1SvImJ_T0009521.1 MGP_129S1SvImJ_G0007637.1 mouse_genomes_project 1 85243938 85244051 - Mir6353 miRNA miRNA MGP_129S1SvImJ_T0002792.1 MGP_129S1SvImJ_G0002656.1 mouse_genomes_project 1 32824326 32829261 - Gm28306 antisense antisense MGP_129S1SvImJ_T0000766.1 MGP_129S1SvImJ_G0000703.1 mouse_genomes_project 1 178385890 178387457 + TEC TEC MGP_129S1SvImJ_T0000523.1 MGP_129S1SvImJ_G0000462.1 mouse_genomes_project 1 63396065 63396544 - TEC TEC MGP_129S1SvImJ_T0012249.1 MGP_129S1SvImJ_G0010338.1 mouse_genomes_project 1 131758394 131758994 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100315.1 MGP_129S1SvImJ_G0038382.1 mouse_genomes_project 1 16565722 16565794 - Gm24075 snoRNA snoRNA MGP_129S1SvImJ_T0012149.1 MGP_129S1SvImJ_G0010238.1 mouse_genomes_project 1 90496423 90496666 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020240.1 MGP_129S1SvImJ_G0016093.1 mouse_genomes_project 1 63928071 63942159 - MGP_129S1SvImJ_P0020240 4933402D24Rik protein_coding protein_coding MGP_129S1SvImJ_T0012175.1 MGP_129S1SvImJ_G0010264.1 mouse_genomes_project 1 103687329 103688059 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000774.1 MGP_129S1SvImJ_G0000711.1 mouse_genomes_project 1 183044790 183045513 + TEC TEC MGP_129S1SvImJ_T0022365.1 MGP_129S1SvImJ_G0016534.1 mouse_genomes_project 1 139847646 139848213 + MGP_129S1SvImJ_P0022365 Ascl5 protein_coding protein_coding MGP_129S1SvImJ_T0012069.1 MGP_129S1SvImJ_G0010158.1 mouse_genomes_project 1 60338156 60338383 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021997.1 MGP_129S1SvImJ_G0016457.1 mouse_genomes_project 1 135117052 135143412 + MGP_129S1SvImJ_P0021997 Rab7b protein_coding protein_coding MGP_129S1SvImJ_T0021998.1 MGP_129S1SvImJ_G0016457.1 mouse_genomes_project 1 135117064 135140500 + MGP_129S1SvImJ_P0021998 Rab7b protein_coding protein_coding MGP_129S1SvImJ_T0021999.1 MGP_129S1SvImJ_G0016457.1 mouse_genomes_project 1 135117095 135139417 + MGP_129S1SvImJ_P0021999 Rab7b protein_coding protein_coding MGP_129S1SvImJ_T0022000.1 MGP_129S1SvImJ_G0016457.1 mouse_genomes_project 1 135117123 135139584 + MGP_129S1SvImJ_P0022000 Rab7b protein_coding protein_coding MGP_129S1SvImJ_T0022001.1 MGP_129S1SvImJ_G0016457.1 mouse_genomes_project 1 135124876 135133829 + Rab7b protein_coding processed_transcript MGP_129S1SvImJ_T0012110.1 MGP_129S1SvImJ_G0010199.1 mouse_genomes_project 1 72149139 72149490 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002827.1 MGP_129S1SvImJ_G0002684.1 mouse_genomes_project 1 57742417 57749694 - Gm17234 antisense antisense MGP_129S1SvImJ_T0012146.1 MGP_129S1SvImJ_G0010235.1 mouse_genomes_project 1 89414457 89416913 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023888.1 MGP_129S1SvImJ_G0016870.1 mouse_genomes_project 1 187003677 187013862 + MGP_129S1SvImJ_P0023888 Parp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023889.1 MGP_129S1SvImJ_G0016870.1 mouse_genomes_project 1 187003682 187035955 + MGP_129S1SvImJ_P0023889 Parp1 protein_coding protein_coding MGP_129S1SvImJ_T0023890.1 MGP_129S1SvImJ_G0016870.1 mouse_genomes_project 1 187003979 187012325 + MGP_129S1SvImJ_P0023890 Parp1 protein_coding protein_coding MGP_129S1SvImJ_T0023891.1 MGP_129S1SvImJ_G0016870.1 mouse_genomes_project 1 187024167 187026351 + Parp1 protein_coding retained_intron MGP_129S1SvImJ_T0023892.1 MGP_129S1SvImJ_G0016870.1 mouse_genomes_project 1 187032925 187034897 + Parp1 protein_coding retained_intron MGP_129S1SvImJ_T0023893.1 MGP_129S1SvImJ_G0016870.1 mouse_genomes_project 1 187033536 187034807 + Parp1 protein_coding retained_intron MGP_129S1SvImJ_T0023894.1 MGP_129S1SvImJ_G0016870.1 mouse_genomes_project 1 187033688 187035953 + MGP_129S1SvImJ_P0023894 Parp1 protein_coding protein_coding MGP_129S1SvImJ_T0023530.1 MGP_129S1SvImJ_G0016774.1 mouse_genomes_project 1 177843800 177872610 - MGP_129S1SvImJ_P0023530 Vangl2 protein_coding protein_coding MGP_129S1SvImJ_T0023531.1 MGP_129S1SvImJ_G0016774.1 mouse_genomes_project 1 177843800 177871458 - MGP_129S1SvImJ_P0023531 Vangl2 protein_coding protein_coding MGP_129S1SvImJ_T0023532.1 MGP_129S1SvImJ_G0016774.1 mouse_genomes_project 1 177847142 177871458 - MGP_129S1SvImJ_P0023532 Vangl2 protein_coding protein_coding MGP_129S1SvImJ_T0023533.1 MGP_129S1SvImJ_G0016774.1 mouse_genomes_project 1 177847484 177851739 - Vangl2 protein_coding processed_transcript MGP_129S1SvImJ_T0023534.1 MGP_129S1SvImJ_G0016774.1 mouse_genomes_project 1 177853046 177870872 - MGP_129S1SvImJ_P0023534 Vangl2 protein_coding protein_coding MGP_129S1SvImJ_T0023535.1 MGP_129S1SvImJ_G0016774.1 mouse_genomes_project 1 177853129 177871431 - MGP_129S1SvImJ_P0023535 Vangl2 protein_coding protein_coding MGP_129S1SvImJ_T0011919.1 MGP_129S1SvImJ_G0010008.1 mouse_genomes_project 1 13520693 13524365 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012329.1 MGP_129S1SvImJ_G0010418.1 mouse_genomes_project 1 169025647 169027903 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020623.1 MGP_129S1SvImJ_G0016172.1 mouse_genomes_project 1 75703689 75708863 + MGP_129S1SvImJ_P0020623 Fam134a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020624.1 MGP_129S1SvImJ_G0016172.1 mouse_genomes_project 1 75703697 75708867 + MGP_129S1SvImJ_P0020624 Fam134a protein_coding protein_coding MGP_129S1SvImJ_T0020625.1 MGP_129S1SvImJ_G0016172.1 mouse_genomes_project 1 75703705 75708863 + MGP_129S1SvImJ_P0020625 Fam134a protein_coding protein_coding MGP_129S1SvImJ_T0020626.1 MGP_129S1SvImJ_G0016172.1 mouse_genomes_project 1 75703891 75705618 + MGP_129S1SvImJ_P0020626 Fam134a protein_coding protein_coding MGP_129S1SvImJ_T0020627.1 MGP_129S1SvImJ_G0016172.1 mouse_genomes_project 1 75704076 75708861 + MGP_129S1SvImJ_P0020627 Fam134a protein_coding protein_coding MGP_129S1SvImJ_T0020628.1 MGP_129S1SvImJ_G0016172.1 mouse_genomes_project 1 75704093 75705331 + MGP_129S1SvImJ_P0020628 Fam134a protein_coding protein_coding MGP_129S1SvImJ_T0020629.1 MGP_129S1SvImJ_G0016172.1 mouse_genomes_project 1 75704289 75705063 + Fam134a protein_coding retained_intron MGP_129S1SvImJ_T0020630.1 MGP_129S1SvImJ_G0016172.1 mouse_genomes_project 1 75706257 75706715 + MGP_129S1SvImJ_P0020630 Fam134a protein_coding protein_coding MGP_129S1SvImJ_T0012031.1 MGP_129S1SvImJ_G0010120.1 mouse_genomes_project 1 48255603 48256614 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100391.1 MGP_129S1SvImJ_G0038458.1 mouse_genomes_project 1 166288692 166288773 + Snord80 snoRNA snoRNA MGP_129S1SvImJ_T0012004.1 MGP_129S1SvImJ_G0010093.1 mouse_genomes_project 1 42924608 42925153 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006018.1 MGP_129S1SvImJ_G0005045.1 mouse_genomes_project 1 183784167 183789671 - Gm37280 lincRNA lincRNA MGP_129S1SvImJ_T0012003.1 MGP_129S1SvImJ_G0010092.1 mouse_genomes_project 1 42817907 42819186 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023325.1 MGP_129S1SvImJ_G0016726.1 mouse_genomes_project 1 175884767 175906131 - MGP_129S1SvImJ_P0023325 Uhmk1 protein_coding protein_coding MGP_129S1SvImJ_T0023326.1 MGP_129S1SvImJ_G0016726.1 mouse_genomes_project 1 175884767 175904079 - MGP_129S1SvImJ_P0023326 Uhmk1 protein_coding protein_coding MGP_129S1SvImJ_T0023327.1 MGP_129S1SvImJ_G0016726.1 mouse_genomes_project 1 175884767 175904079 - MGP_129S1SvImJ_P0023327 Uhmk1 protein_coding protein_coding MGP_129S1SvImJ_T0023328.1 MGP_129S1SvImJ_G0016726.1 mouse_genomes_project 1 175885863 175906664 - MGP_129S1SvImJ_P0023328 Uhmk1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0023954.1 MGP_129S1SvImJ_G0016886.1 mouse_genomes_project 1 188038067 188039886 - MGP_129S1SvImJ_P0023954 Ccdc121 protein_coding protein_coding MGP_129S1SvImJ_T0098789.1 MGP_129S1SvImJ_G0036873.1 mouse_genomes_project 1 141930064 141931310 + Gm26930 sense_intronic sense_intronic MGP_129S1SvImJ_T0019263.1 MGP_129S1SvImJ_G0015914.1 mouse_genomes_project 1 33100282 33246619 + MGP_129S1SvImJ_P0019263 protein_coding protein_coding MGP_129S1SvImJ_T0019264.1 MGP_129S1SvImJ_G0015914.1 mouse_genomes_project 1 33156320 33245709 + MGP_129S1SvImJ_P0019264 protein_coding protein_coding MGP_129S1SvImJ_T0019265.1 MGP_129S1SvImJ_G0015914.1 mouse_genomes_project 1 33172126 33241003 + MGP_129S1SvImJ_P0019265 protein_coding protein_coding MGP_129S1SvImJ_T0019266.1 MGP_129S1SvImJ_G0015914.1 mouse_genomes_project 1 33235623 33247195 + MGP_129S1SvImJ_P0019266 protein_coding protein_coding MGP_129S1SvImJ_T0019267.1 MGP_129S1SvImJ_G0015914.1 mouse_genomes_project 1 33235640 33243093 + protein_coding retained_intron MGP_129S1SvImJ_T0019268.1 MGP_129S1SvImJ_G0015914.1 mouse_genomes_project 1 33235641 33240557 + protein_coding retained_intron MGP_129S1SvImJ_T0019269.1 MGP_129S1SvImJ_G0015914.1 mouse_genomes_project 1 33235660 33242764 + MGP_129S1SvImJ_P0019269 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021514.1 MGP_129S1SvImJ_G0016348.1 mouse_genomes_project 1 95393053 95419963 + MGP_129S1SvImJ_P0021514 Atg4b protein_coding protein_coding MGP_129S1SvImJ_T0021515.1 MGP_129S1SvImJ_G0016348.1 mouse_genomes_project 1 95398310 95433558 + MGP_129S1SvImJ_P0021515 Atg4b protein_coding protein_coding MGP_129S1SvImJ_T0021516.1 MGP_129S1SvImJ_G0016348.1 mouse_genomes_project 1 95398393 95422568 + MGP_129S1SvImJ_P0021516 Atg4b protein_coding protein_coding MGP_129S1SvImJ_T0021517.1 MGP_129S1SvImJ_G0016348.1 mouse_genomes_project 1 95398440 95427869 + MGP_129S1SvImJ_P0021517 Atg4b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021518.1 MGP_129S1SvImJ_G0016348.1 mouse_genomes_project 1 95398450 95431122 + Atg4b protein_coding retained_intron MGP_129S1SvImJ_T0021519.1 MGP_129S1SvImJ_G0016348.1 mouse_genomes_project 1 95398567 95411224 + Atg4b protein_coding processed_transcript MGP_129S1SvImJ_T0021520.1 MGP_129S1SvImJ_G0016348.1 mouse_genomes_project 1 95411200 95419728 + Atg4b protein_coding retained_intron MGP_129S1SvImJ_T0021521.1 MGP_129S1SvImJ_G0016348.1 mouse_genomes_project 1 95427288 95428025 + Atg4b protein_coding retained_intron MGP_129S1SvImJ_T0021522.1 MGP_129S1SvImJ_G0016348.1 mouse_genomes_project 1 95427742 95430820 + MGP_129S1SvImJ_P0021522 Atg4b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021523.1 MGP_129S1SvImJ_G0016348.1 mouse_genomes_project 1 95428526 95429524 + Atg4b protein_coding retained_intron MGP_129S1SvImJ_T0021524.1 MGP_129S1SvImJ_G0016348.1 mouse_genomes_project 1 95429161 95430842 + Atg4b protein_coding retained_intron MGP_129S1SvImJ_T0000718.1 MGP_129S1SvImJ_G0000655.1 mouse_genomes_project 1 161412231 161414794 + TEC TEC MGP_129S1SvImJ_T0009476.1 MGP_129S1SvImJ_G0007592.1 mouse_genomes_project 1 6004492 6004602 + Gm24276 miRNA miRNA MGP_129S1SvImJ_T0005976.1 MGP_129S1SvImJ_G0005010.1 mouse_genomes_project 1 164256879 164295722 + 4930562F17Rik lincRNA lincRNA MGP_129S1SvImJ_T0012104.1 MGP_129S1SvImJ_G0010193.1 mouse_genomes_project 1 68588439 68588886 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021352.1 MGP_129S1SvImJ_G0016313.1 mouse_genomes_project 1 93358403 93406766 + MGP_129S1SvImJ_P0021352 Twist2 protein_coding protein_coding MGP_129S1SvImJ_T0021353.1 MGP_129S1SvImJ_G0016313.1 mouse_genomes_project 1 93358412 93360937 + MGP_129S1SvImJ_P0021353 Twist2 protein_coding protein_coding MGP_129S1SvImJ_T0011913.1 MGP_129S1SvImJ_G0010002.1 mouse_genomes_project 1 9418881 9419754 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012240.1 MGP_129S1SvImJ_G0010329.1 mouse_genomes_project 1 126136884 126137001 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000401.1 MGP_129S1SvImJ_G0000343.1 mouse_genomes_project 1 8666784 8669823 - TEC TEC MGP_129S1SvImJ_T0009558.1 MGP_129S1SvImJ_G0007674.1 mouse_genomes_project 1 167548697 167548807 + Mir214 miRNA miRNA MGP_129S1SvImJ_T0000419.1 MGP_129S1SvImJ_G0000361.1 mouse_genomes_project 1 14128893 14131873 + TEC TEC MGP_129S1SvImJ_T0005689.1 MGP_129S1SvImJ_G0004789.1 mouse_genomes_project 1 25862994 25883161 + Gm5524 lincRNA lincRNA MGP_129S1SvImJ_T0100328.1 MGP_129S1SvImJ_G0038395.1 mouse_genomes_project 1 41828262 41828396 - Gm23126 snoRNA snoRNA MGP_129S1SvImJ_T0024099.1 MGP_129S1SvImJ_G0016917.1 mouse_genomes_project 1 192193984 192207829 + MGP_129S1SvImJ_P0024099 Slc30a10 protein_coding protein_coding MGP_129S1SvImJ_T0005909.1 MGP_129S1SvImJ_G0004955.1 mouse_genomes_project 1 124041322 124044585 + Gm29359 lincRNA lincRNA MGP_129S1SvImJ_T0102087.1 MGP_129S1SvImJ_G0039922.1 mouse_genomes_project 1 166434997 166498073 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0018820.1 MGP_129S1SvImJ_G0015822.1 mouse_genomes_project 1 5601169 6501298 - MGP_129S1SvImJ_P0018820 Sntg1 protein_coding protein_coding MGP_129S1SvImJ_T0018821.1 MGP_129S1SvImJ_G0015822.1 mouse_genomes_project 1 5601169 6500633 - MGP_129S1SvImJ_P0018821 Sntg1 protein_coding protein_coding MGP_129S1SvImJ_T0018822.1 MGP_129S1SvImJ_G0015822.1 mouse_genomes_project 1 5601169 6500924 - MGP_129S1SvImJ_P0018822 Sntg1 protein_coding protein_coding MGP_129S1SvImJ_T0018823.1 MGP_129S1SvImJ_G0015822.1 mouse_genomes_project 1 5602372 6501939 - MGP_129S1SvImJ_P0018823 Sntg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018824.1 MGP_129S1SvImJ_G0015822.1 mouse_genomes_project 1 5602877 5707903 - Sntg1 protein_coding processed_transcript MGP_129S1SvImJ_T0018825.1 MGP_129S1SvImJ_G0015822.1 mouse_genomes_project 1 5603119 5707862 - Sntg1 protein_coding processed_transcript MGP_129S1SvImJ_T0018826.1 MGP_129S1SvImJ_G0015822.1 mouse_genomes_project 1 5603169 5990642 - MGP_129S1SvImJ_P0018826 Sntg1 protein_coding protein_coding MGP_129S1SvImJ_T0018827.1 MGP_129S1SvImJ_G0015822.1 mouse_genomes_project 1 5890563 6501342 - MGP_129S1SvImJ_P0018827 Sntg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018828.1 MGP_129S1SvImJ_G0015822.1 mouse_genomes_project 1 5969744 6501569 - Sntg1 protein_coding retained_intron MGP_129S1SvImJ_T0018829.1 MGP_129S1SvImJ_G0015822.1 mouse_genomes_project 1 6151895 6154275 - Sntg1 protein_coding retained_intron MGP_129S1SvImJ_T0018830.1 MGP_129S1SvImJ_G0015822.1 mouse_genomes_project 1 6152153 6500286 - Sntg1 protein_coding processed_transcript MGP_129S1SvImJ_T0000599.1 MGP_129S1SvImJ_G0000538.1 mouse_genomes_project 1 99313677 99314862 - TEC TEC MGP_129S1SvImJ_T0102084.1 MGP_129S1SvImJ_G0039919.1 mouse_genomes_project 1 143669903 143753438 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0011916.1 MGP_129S1SvImJ_G0010005.1 mouse_genomes_project 1 10779535 10780176 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002885.1 MGP_129S1SvImJ_G0002728.1 mouse_genomes_project 1 107457113 107462741 + Gm17634 antisense antisense MGP_129S1SvImJ_T0002886.1 MGP_129S1SvImJ_G0002728.1 mouse_genomes_project 1 107457869 107462873 + Gm17634 antisense antisense MGP_129S1SvImJ_T0002887.1 MGP_129S1SvImJ_G0002728.1 mouse_genomes_project 1 107458255 107458619 + Gm17634 antisense antisense MGP_129S1SvImJ_T0023676.1 MGP_129S1SvImJ_G0016822.1 mouse_genomes_project 1 180106230 180107184 + MGP_129S1SvImJ_P0023676 Olfr430 protein_coding protein_coding MGP_129S1SvImJ_T0022366.1 MGP_129S1SvImJ_G0016535.1 mouse_genomes_project 1 139849576 139921075 + MGP_129S1SvImJ_P0022366 Cacna1s protein_coding protein_coding MGP_129S1SvImJ_T0022367.1 MGP_129S1SvImJ_G0016535.1 mouse_genomes_project 1 139849610 139921080 + MGP_129S1SvImJ_P0022367 Cacna1s protein_coding protein_coding MGP_129S1SvImJ_T0022368.1 MGP_129S1SvImJ_G0016535.1 mouse_genomes_project 1 139849727 139921367 + MGP_129S1SvImJ_P0022368 Cacna1s protein_coding protein_coding MGP_129S1SvImJ_T0022369.1 MGP_129S1SvImJ_G0016535.1 mouse_genomes_project 1 139870291 139921074 + MGP_129S1SvImJ_P0022369 Cacna1s protein_coding protein_coding MGP_129S1SvImJ_T0022370.1 MGP_129S1SvImJ_G0016535.1 mouse_genomes_project 1 139905654 139912277 + Cacna1s protein_coding retained_intron MGP_129S1SvImJ_T0022371.1 MGP_129S1SvImJ_G0016535.1 mouse_genomes_project 1 139918800 139921074 + Cacna1s protein_coding processed_transcript MGP_129S1SvImJ_T0000453.1 MGP_129S1SvImJ_G0000393.1 mouse_genomes_project 1 29061797 29064833 - TEC TEC MGP_129S1SvImJ_T0022169.1 MGP_129S1SvImJ_G0016491.1 mouse_genomes_project 1 137255140 137260147 - MGP_129S1SvImJ_P0022169 protein_coding protein_coding MGP_129S1SvImJ_T0022791.1 MGP_129S1SvImJ_G0016619.1 mouse_genomes_project 1 160996619 161031373 + MGP_129S1SvImJ_P0022791 Tor1aip2 protein_coding protein_coding MGP_129S1SvImJ_T0022792.1 MGP_129S1SvImJ_G0016619.1 mouse_genomes_project 1 160996988 161021186 + MGP_129S1SvImJ_P0022792 Tor1aip2 protein_coding protein_coding MGP_129S1SvImJ_T0022793.1 MGP_129S1SvImJ_G0016619.1 mouse_genomes_project 1 161002533 161013313 + Tor1aip2 protein_coding processed_transcript MGP_129S1SvImJ_T0022794.1 MGP_129S1SvImJ_G0016619.1 mouse_genomes_project 1 161002533 161031373 + MGP_129S1SvImJ_P0022794 Tor1aip2 protein_coding protein_coding MGP_129S1SvImJ_T0022795.1 MGP_129S1SvImJ_G0016619.1 mouse_genomes_project 1 161024835 161027354 + Tor1aip2 protein_coding retained_intron MGP_129S1SvImJ_T0019054.1 MGP_129S1SvImJ_G0015867.1 mouse_genomes_project 1 16704443 16773621 + MGP_129S1SvImJ_P0019054 Tfap2d protein_coding protein_coding MGP_129S1SvImJ_T0019055.1 MGP_129S1SvImJ_G0015867.1 mouse_genomes_project 1 16709614 16752796 + Tfap2d protein_coding processed_transcript MGP_129S1SvImJ_T0000422.1 MGP_129S1SvImJ_G0000364.1 mouse_genomes_project 1 17679568 17683132 - TEC TEC MGP_129S1SvImJ_T0099083.1 MGP_129S1SvImJ_G0037150.1 mouse_genomes_project 1 58336802 58336909 - Gm23966 snRNA snRNA MGP_129S1SvImJ_T0000785.1 MGP_129S1SvImJ_G0000721.1 mouse_genomes_project 1 184626945 184628815 + TEC TEC MGP_129S1SvImJ_T0024297.1 MGP_129S1SvImJ_G0016956.1 mouse_genomes_project 1 199958885 200115793 - MGP_129S1SvImJ_P0024297 Syt14 protein_coding protein_coding MGP_129S1SvImJ_T0024298.1 MGP_129S1SvImJ_G0016956.1 mouse_genomes_project 1 199963638 200115680 - MGP_129S1SvImJ_P0024298 Syt14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024299.1 MGP_129S1SvImJ_G0016956.1 mouse_genomes_project 1 199964862 200115735 - MGP_129S1SvImJ_P0024299 Syt14 protein_coding protein_coding MGP_129S1SvImJ_T0024300.1 MGP_129S1SvImJ_G0016956.1 mouse_genomes_project 1 200001881 200115662 - Syt14 protein_coding retained_intron MGP_129S1SvImJ_T0020174.1 MGP_129S1SvImJ_G0016081.1 mouse_genomes_project 1 61060948 61078947 + MGP_129S1SvImJ_P0020174 Icos protein_coding protein_coding MGP_129S1SvImJ_T0020175.1 MGP_129S1SvImJ_G0016081.1 mouse_genomes_project 1 61060948 61083480 + MGP_129S1SvImJ_P0020175 Icos protein_coding protein_coding MGP_129S1SvImJ_T0003011.1 MGP_129S1SvImJ_G0002827.1 mouse_genomes_project 1 198965540 198980389 - 1700034H15Rik antisense antisense MGP_129S1SvImJ_T0003012.1 MGP_129S1SvImJ_G0002827.1 mouse_genomes_project 1 198969634 198978628 - 1700034H15Rik antisense antisense MGP_129S1SvImJ_T0003013.1 MGP_129S1SvImJ_G0002827.1 mouse_genomes_project 1 198969636 198978755 - 1700034H15Rik antisense antisense MGP_129S1SvImJ_T0003014.1 MGP_129S1SvImJ_G0002827.1 mouse_genomes_project 1 198969825 198981222 - 1700034H15Rik antisense antisense MGP_129S1SvImJ_T0003015.1 MGP_129S1SvImJ_G0002827.1 mouse_genomes_project 1 198973521 198987009 - 1700034H15Rik antisense antisense MGP_129S1SvImJ_T0003016.1 MGP_129S1SvImJ_G0002827.1 mouse_genomes_project 1 198979472 198987017 - 1700034H15Rik antisense antisense MGP_129S1SvImJ_T0012085.1 MGP_129S1SvImJ_G0010174.1 mouse_genomes_project 1 63159321 63159689 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012101.1 MGP_129S1SvImJ_G0010190.1 mouse_genomes_project 1 67045757 67048291 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002927.1 MGP_129S1SvImJ_G0002758.1 mouse_genomes_project 1 151291193 151315852 - Gm15584 antisense antisense MGP_129S1SvImJ_T0012386.1 MGP_129S1SvImJ_G0010475.1 mouse_genomes_project 1 198015533 198015738 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002958.1 MGP_129S1SvImJ_G0002782.1 mouse_genomes_project 1 170247354 170258683 - Gm32569 antisense antisense MGP_129S1SvImJ_T0002959.1 MGP_129S1SvImJ_G0002782.1 mouse_genomes_project 1 170247480 170346555 - Gm32569 antisense antisense MGP_129S1SvImJ_T0023380.1 MGP_129S1SvImJ_G0016742.1 mouse_genomes_project 1 176902838 176928143 - MGP_129S1SvImJ_P0023380 Sdhc protein_coding protein_coding MGP_129S1SvImJ_T0023381.1 MGP_129S1SvImJ_G0016742.1 mouse_genomes_project 1 176905072 176928131 - MGP_129S1SvImJ_P0023381 Sdhc protein_coding protein_coding MGP_129S1SvImJ_T0023382.1 MGP_129S1SvImJ_G0016742.1 mouse_genomes_project 1 176915345 176928128 - MGP_129S1SvImJ_P0023382 Sdhc protein_coding protein_coding MGP_129S1SvImJ_T0000722.1 MGP_129S1SvImJ_G0000659.1 mouse_genomes_project 1 161856795 161860623 - TEC TEC MGP_129S1SvImJ_T0022709.1 MGP_129S1SvImJ_G0016603.1 mouse_genomes_project 1 158702609 158762115 - MGP_129S1SvImJ_P0022709 Teddm2 protein_coding protein_coding MGP_129S1SvImJ_T0022710.1 MGP_129S1SvImJ_G0016603.1 mouse_genomes_project 1 158702609 158704263 - MGP_129S1SvImJ_P0022710 Teddm2 protein_coding protein_coding MGP_129S1SvImJ_T0022713.1 MGP_129S1SvImJ_G0016603.1 mouse_genomes_project 1 158759030 158762135 - Teddm2 protein_coding retained_intron MGP_129S1SvImJ_T0002949.1 MGP_129S1SvImJ_G0002776.1 mouse_genomes_project 1 167276108 167338289 + Gm38304 antisense antisense MGP_129S1SvImJ_T0005978.1 MGP_129S1SvImJ_G0005012.1 mouse_genomes_project 1 165248061 165251312 - 4930562F07Rik lincRNA lincRNA MGP_129S1SvImJ_T0005979.1 MGP_129S1SvImJ_G0005012.1 mouse_genomes_project 1 165248061 165251245 - 4930562F07Rik lincRNA lincRNA MGP_129S1SvImJ_T0005980.1 MGP_129S1SvImJ_G0005012.1 mouse_genomes_project 1 165248296 165251269 - 4930562F07Rik lincRNA lincRNA MGP_129S1SvImJ_T0000795.1 MGP_129S1SvImJ_G0000731.1 mouse_genomes_project 1 188556099 188558324 - TEC TEC MGP_129S1SvImJ_T0000417.1 MGP_129S1SvImJ_G0000359.1 mouse_genomes_project 1 13327755 13330929 + TEC TEC MGP_129S1SvImJ_T0000744.1 MGP_129S1SvImJ_G0000681.1 mouse_genomes_project 1 166152624 166156193 + TEC TEC MGP_129S1SvImJ_T0005667.1 MGP_129S1SvImJ_G0004772.1 mouse_genomes_project 1 7205672 7207832 - Snhg6 lincRNA lincRNA MGP_129S1SvImJ_T0005668.1 MGP_129S1SvImJ_G0004772.1 mouse_genomes_project 1 7205736 7206944 - Snhg6 lincRNA lincRNA MGP_129S1SvImJ_T0005669.1 MGP_129S1SvImJ_G0004772.1 mouse_genomes_project 1 7205738 7207817 - Snhg6 lincRNA lincRNA MGP_129S1SvImJ_T0005670.1 MGP_129S1SvImJ_G0004772.1 mouse_genomes_project 1 7205738 7207831 - Snhg6 lincRNA lincRNA MGP_129S1SvImJ_T0005671.1 MGP_129S1SvImJ_G0004772.1 mouse_genomes_project 1 7205738 7206618 - Snhg6 lincRNA lincRNA MGP_129S1SvImJ_T0011265.1 MGP_129S1SvImJ_G0009381.1 mouse_genomes_project 1 49676442 49676574 - Gm27330 misc_RNA misc_RNA MGP_129S1SvImJ_T0005820.1 MGP_129S1SvImJ_G0004883.1 mouse_genomes_project 1 79331342 79349069 - 5730419F03Rik lincRNA lincRNA MGP_129S1SvImJ_T0020077.1 MGP_129S1SvImJ_G0016067.1 mouse_genomes_project 1 59482831 59609447 + MGP_129S1SvImJ_P0020077 Gm973 protein_coding protein_coding MGP_129S1SvImJ_T0020078.1 MGP_129S1SvImJ_G0016067.1 mouse_genomes_project 1 59493870 59496548 + MGP_129S1SvImJ_P0020078 Gm973 protein_coding protein_coding MGP_129S1SvImJ_T0020079.1 MGP_129S1SvImJ_G0016067.1 mouse_genomes_project 1 59494234 59568922 + MGP_129S1SvImJ_P0020079 Gm973 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0020080.1 MGP_129S1SvImJ_G0016067.1 mouse_genomes_project 1 59515328 59527281 + Gm973 protein_coding retained_intron MGP_129S1SvImJ_T0020081.1 MGP_129S1SvImJ_G0016067.1 mouse_genomes_project 1 59519821 59532128 + Gm973 protein_coding processed_transcript MGP_129S1SvImJ_T0020082.1 MGP_129S1SvImJ_G0016067.1 mouse_genomes_project 1 59528994 59535973 + Gm973 protein_coding retained_intron MGP_129S1SvImJ_T0020084.1 MGP_129S1SvImJ_G0016067.1 mouse_genomes_project 1 59580075 59602416 + Gm973 protein_coding processed_transcript MGP_129S1SvImJ_T0020085.1 MGP_129S1SvImJ_G0016067.1 mouse_genomes_project 1 59580109 59604458 + Gm973 protein_coding processed_transcript MGP_129S1SvImJ_T0020086.1 MGP_129S1SvImJ_G0016067.1 mouse_genomes_project 1 59593568 59602398 + Gm973 protein_coding processed_transcript MGP_129S1SvImJ_T0020087.1 MGP_129S1SvImJ_G0016067.1 mouse_genomes_project 1 59604477 59611355 + MGP_129S1SvImJ_P0020087 Gm973 protein_coding protein_coding MGP_129S1SvImJ_T0102104.1 MGP_129S1SvImJ_G0039939.1 mouse_genomes_project 1 184224591 184235674 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0100347.1 MGP_129S1SvImJ_G0038414.1 mouse_genomes_project 1 80282896 80283022 - Gm24160 snoRNA snoRNA MGP_129S1SvImJ_T0023778.1 MGP_129S1SvImJ_G0016849.1 mouse_genomes_project 1 183929967 183956535 + MGP_129S1SvImJ_P0023778 1700016C15Rik protein_coding protein_coding MGP_129S1SvImJ_T0020815.1 MGP_129S1SvImJ_G0016195.1 mouse_genomes_project 1 78038488 78189818 - MGP_129S1SvImJ_P0020815 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0020816.1 MGP_129S1SvImJ_G0016195.1 mouse_genomes_project 1 78044899 78048875 - MGP_129S1SvImJ_P0020816 protein_coding protein_coding MGP_129S1SvImJ_T0020817.1 MGP_129S1SvImJ_G0016195.1 mouse_genomes_project 1 78044917 78188757 - MGP_129S1SvImJ_P0020817 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020818.1 MGP_129S1SvImJ_G0016195.1 mouse_genomes_project 1 78070019 78188763 - protein_coding retained_intron MGP_129S1SvImJ_T0020819.1 MGP_129S1SvImJ_G0016195.1 mouse_genomes_project 1 78074432 78188761 - MGP_129S1SvImJ_P0020819 protein_coding protein_coding MGP_129S1SvImJ_T0023654.1 MGP_129S1SvImJ_G0016809.1 mouse_genomes_project 1 179281357 179395907 + MGP_129S1SvImJ_P0023654 Aim2 protein_coding protein_coding MGP_129S1SvImJ_T0023655.1 MGP_129S1SvImJ_G0016809.1 mouse_genomes_project 1 179348533 179357081 + Aim2 protein_coding processed_transcript MGP_129S1SvImJ_T0023656.1 MGP_129S1SvImJ_G0016809.1 mouse_genomes_project 1 179349928 179388975 + MGP_129S1SvImJ_P0023656 Aim2 protein_coding protein_coding MGP_129S1SvImJ_T0023657.1 MGP_129S1SvImJ_G0016809.1 mouse_genomes_project 1 179384238 179384863 + MGP_129S1SvImJ_P0023657 Aim2 protein_coding protein_coding MGP_129S1SvImJ_T0023658.1 MGP_129S1SvImJ_G0016809.1 mouse_genomes_project 1 179384621 179391262 + Aim2 protein_coding processed_transcript MGP_129S1SvImJ_T0023659.1 MGP_129S1SvImJ_G0016809.1 mouse_genomes_project 1 179384621 179395899 + MGP_129S1SvImJ_P0023659 Aim2 protein_coding protein_coding MGP_129S1SvImJ_T0023660.1 MGP_129S1SvImJ_G0016809.1 mouse_genomes_project 1 179384755 179385433 + Aim2 protein_coding processed_transcript MGP_129S1SvImJ_T0002818.1 MGP_129S1SvImJ_G0002677.1 mouse_genomes_project 1 42770977 42772912 - Gm29155 antisense antisense MGP_129S1SvImJ_T0002819.1 MGP_129S1SvImJ_G0002677.1 mouse_genomes_project 1 42772600 42772869 - Gm29155 antisense antisense MGP_129S1SvImJ_T0005772.1 MGP_129S1SvImJ_G0004848.1 mouse_genomes_project 1 61561913 61562991 + Gm28449 lincRNA lincRNA MGP_129S1SvImJ_T0098725.1 MGP_129S1SvImJ_G0036810.1 mouse_genomes_project 1 164484465 164484605 + Scarna3a scaRNA scaRNA MGP_129S1SvImJ_T0011992.1 MGP_129S1SvImJ_G0010081.1 mouse_genomes_project 1 37155143 37155672 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000535.1 MGP_129S1SvImJ_G0000474.1 mouse_genomes_project 1 68936018 68937384 - TEC TEC MGP_129S1SvImJ_T0000671.1 MGP_129S1SvImJ_G0000609.1 mouse_genomes_project 1 141740090 141748097 - TEC TEC MGP_129S1SvImJ_T0022877.1 MGP_129S1SvImJ_G0016634.1 mouse_genomes_project 1 163340259 163455860 - MGP_129S1SvImJ_P0022877 Brinp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022878.1 MGP_129S1SvImJ_G0016634.1 mouse_genomes_project 1 163340259 163455957 - MGP_129S1SvImJ_P0022878 Brinp2 protein_coding protein_coding MGP_129S1SvImJ_T0022879.1 MGP_129S1SvImJ_G0016634.1 mouse_genomes_project 1 163397311 163398072 - Brinp2 protein_coding processed_transcript MGP_129S1SvImJ_T0022880.1 MGP_129S1SvImJ_G0016634.1 mouse_genomes_project 1 163451919 163455926 - Brinp2 protein_coding retained_intron MGP_129S1SvImJ_T0023522.1 MGP_129S1SvImJ_G0016772.1 mouse_genomes_project 1 177719657 177722188 + MGP_129S1SvImJ_P0023522 Gm10521 protein_coding protein_coding MGP_129S1SvImJ_T0099134.1 MGP_129S1SvImJ_G0037201.1 mouse_genomes_project 1 176576891 176576998 - Gm25235 snRNA snRNA MGP_129S1SvImJ_T0003025.1 MGP_129S1SvImJ_G0002835.1 mouse_genomes_project 1 202127774 202158229 - Gm16897 antisense antisense MGP_129S1SvImJ_T0020306.1 MGP_129S1SvImJ_G0016110.1 mouse_genomes_project 1 65487808 65561995 + MGP_129S1SvImJ_P0020306 Pth2r protein_coding protein_coding MGP_129S1SvImJ_T0020307.1 MGP_129S1SvImJ_G0016110.1 mouse_genomes_project 1 65519783 65608781 + MGP_129S1SvImJ_P0020307 Pth2r protein_coding protein_coding MGP_129S1SvImJ_T0022719.1 MGP_129S1SvImJ_G0016607.1 mouse_genomes_project 1 159084950 159089455 + MGP_129S1SvImJ_P0022719 Zfp648 protein_coding protein_coding MGP_129S1SvImJ_T0019510.1 MGP_129S1SvImJ_G0015957.1 mouse_genomes_project 1 38105963 38218277 - MGP_129S1SvImJ_P0019510 Tbc1d8 protein_coding protein_coding MGP_129S1SvImJ_T0019511.1 MGP_129S1SvImJ_G0015957.1 mouse_genomes_project 1 38106335 38106913 - MGP_129S1SvImJ_P0019511 Tbc1d8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019512.1 MGP_129S1SvImJ_G0015957.1 mouse_genomes_project 1 38106775 38218183 - MGP_129S1SvImJ_P0019512 Tbc1d8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019513.1 MGP_129S1SvImJ_G0015957.1 mouse_genomes_project 1 38107767 38218222 - MGP_129S1SvImJ_P0019513 Tbc1d8 protein_coding protein_coding MGP_129S1SvImJ_T0019514.1 MGP_129S1SvImJ_G0015957.1 mouse_genomes_project 1 38125662 38127096 - Tbc1d8 protein_coding retained_intron MGP_129S1SvImJ_T0019442.1 MGP_129S1SvImJ_G0015943.1 mouse_genomes_project 1 36523271 36538881 - MGP_129S1SvImJ_P0019442 Mitd1 protein_coding protein_coding MGP_129S1SvImJ_T0019443.1 MGP_129S1SvImJ_G0015943.1 mouse_genomes_project 1 36527358 36538885 - MGP_129S1SvImJ_P0019443 Mitd1 protein_coding protein_coding MGP_129S1SvImJ_T0019444.1 MGP_129S1SvImJ_G0015943.1 mouse_genomes_project 1 36527360 36528589 - Mitd1 protein_coding processed_transcript MGP_129S1SvImJ_T0019445.1 MGP_129S1SvImJ_G0015943.1 mouse_genomes_project 1 36527458 36530345 - Mitd1 protein_coding processed_transcript MGP_129S1SvImJ_T0019446.1 MGP_129S1SvImJ_G0015943.1 mouse_genomes_project 1 36530405 36538750 - Mitd1 protein_coding retained_intron MGP_129S1SvImJ_T0019736.1 MGP_129S1SvImJ_G0016005.1 mouse_genomes_project 1 51489327 51615367 + MGP_129S1SvImJ_P0019736 Stat4 protein_coding protein_coding MGP_129S1SvImJ_T0019737.1 MGP_129S1SvImJ_G0016005.1 mouse_genomes_project 1 51512995 51615362 + MGP_129S1SvImJ_P0019737 Stat4 protein_coding protein_coding MGP_129S1SvImJ_T0019738.1 MGP_129S1SvImJ_G0016005.1 mouse_genomes_project 1 51513378 51578596 + Stat4 protein_coding retained_intron MGP_129S1SvImJ_T0019739.1 MGP_129S1SvImJ_G0016005.1 mouse_genomes_project 1 51613626 51615366 + Stat4 protein_coding retained_intron MGP_129S1SvImJ_T0099102.1 MGP_129S1SvImJ_G0037169.1 mouse_genomes_project 1 99828272 99828379 + Gm24465 snRNA snRNA MGP_129S1SvImJ_T0019929.1 MGP_129S1SvImJ_G0016042.1 mouse_genomes_project 1 57602337 57718351 + MGP_129S1SvImJ_P0019929 Spats2l protein_coding protein_coding MGP_129S1SvImJ_T0019930.1 MGP_129S1SvImJ_G0016042.1 mouse_genomes_project 1 57602424 57712307 + Spats2l protein_coding retained_intron MGP_129S1SvImJ_T0019931.1 MGP_129S1SvImJ_G0016042.1 mouse_genomes_project 1 57602476 57734692 + MGP_129S1SvImJ_P0019931 Spats2l protein_coding protein_coding MGP_129S1SvImJ_T0019932.1 MGP_129S1SvImJ_G0016042.1 mouse_genomes_project 1 57602594 57629322 + Spats2l protein_coding retained_intron MGP_129S1SvImJ_T0019933.1 MGP_129S1SvImJ_G0016042.1 mouse_genomes_project 1 57602775 57718419 + MGP_129S1SvImJ_P0019933 Spats2l protein_coding protein_coding MGP_129S1SvImJ_T0019934.1 MGP_129S1SvImJ_G0016042.1 mouse_genomes_project 1 57602919 57770635 + MGP_129S1SvImJ_P0019934 Spats2l protein_coding protein_coding MGP_129S1SvImJ_T0019935.1 MGP_129S1SvImJ_G0016042.1 mouse_genomes_project 1 57603065 57687540 + Spats2l protein_coding retained_intron MGP_129S1SvImJ_T0019936.1 MGP_129S1SvImJ_G0016042.1 mouse_genomes_project 1 57603087 57661155 + Spats2l protein_coding retained_intron MGP_129S1SvImJ_T0019937.1 MGP_129S1SvImJ_G0016042.1 mouse_genomes_project 1 57603092 57628464 + Spats2l protein_coding retained_intron MGP_129S1SvImJ_T0019938.1 MGP_129S1SvImJ_G0016042.1 mouse_genomes_project 1 57626555 57779073 + MGP_129S1SvImJ_P0019938 Spats2l protein_coding protein_coding MGP_129S1SvImJ_T0019939.1 MGP_129S1SvImJ_G0016042.1 mouse_genomes_project 1 57734653 57772988 + Spats2l protein_coding retained_intron MGP_129S1SvImJ_T0012258.1 MGP_129S1SvImJ_G0010347.1 mouse_genomes_project 1 137112979 137113742 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009559.1 MGP_129S1SvImJ_G0007675.1 mouse_genomes_project 1 168015846 168015909 - Gm27616 miRNA miRNA MGP_129S1SvImJ_T0023095.1 MGP_129S1SvImJ_G0016672.1 mouse_genomes_project 1 169105309 169128094 - MGP_129S1SvImJ_P0023095 Mettl11b protein_coding protein_coding MGP_129S1SvImJ_T0023096.1 MGP_129S1SvImJ_G0016672.1 mouse_genomes_project 1 169106052 169128094 - MGP_129S1SvImJ_P0023096 Mettl11b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0102040.1 MGP_129S1SvImJ_G0039875.1 mouse_genomes_project 1 15567834 15574451 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0011943.1 MGP_129S1SvImJ_G0010032.1 mouse_genomes_project 1 20486334 20487136 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012041.1 MGP_129S1SvImJ_G0010130.1 mouse_genomes_project 1 51438165 51438581 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000407.1 MGP_129S1SvImJ_G0000349.1 mouse_genomes_project 1 10656878 10657574 - TEC TEC MGP_129S1SvImJ_T0000507.1 MGP_129S1SvImJ_G0000446.1 mouse_genomes_project 1 59620977 59622849 - TEC TEC MGP_129S1SvImJ_T0012234.1 MGP_129S1SvImJ_G0010323.1 mouse_genomes_project 1 124358158 124358623 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099031.1 MGP_129S1SvImJ_G0037102.1 mouse_genomes_project 1 196099063 196099720 - 2900042K21Rik sense_overlapping sense_overlapping MGP_129S1SvImJ_T0005831.1 MGP_129S1SvImJ_G0004891.1 mouse_genomes_project 1 84000600 84001557 - Krtap28-10 lincRNA lincRNA MGP_129S1SvImJ_T0000462.1 MGP_129S1SvImJ_G0000401.1 mouse_genomes_project 1 32034395 32036696 - TEC TEC MGP_129S1SvImJ_T0017073.1 MGP_129S1SvImJ_G0015115.1 mouse_genomes_project 1 141894281 141895448 + Gm4258 processed_transcript retained_intron MGP_129S1SvImJ_T0017074.1 MGP_129S1SvImJ_G0015115.1 mouse_genomes_project 1 141894284 142002291 + Gm4258 processed_transcript lincRNA MGP_129S1SvImJ_T0000818.1 MGP_129S1SvImJ_G0000753.1 mouse_genomes_project 1 198586164 198587174 - TEC TEC MGP_129S1SvImJ_T0102081.1 MGP_129S1SvImJ_G0039916.1 mouse_genomes_project 1 134058339 134076406 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0006077.1 MGP_129S1SvImJ_G0005089.1 mouse_genomes_project 1 199909371 199910431 + 1700065J18Rik lincRNA lincRNA MGP_129S1SvImJ_T0006078.1 MGP_129S1SvImJ_G0005089.1 mouse_genomes_project 1 199909381 199910437 + 1700065J18Rik lincRNA lincRNA MGP_129S1SvImJ_T0020050.1 MGP_129S1SvImJ_G0016062.1 mouse_genomes_project 1 59050431 59068355 - MGP_129S1SvImJ_P0020050 Tmem237 protein_coding protein_coding MGP_129S1SvImJ_T0020051.1 MGP_129S1SvImJ_G0016062.1 mouse_genomes_project 1 59050438 59068067 - MGP_129S1SvImJ_P0020051 Tmem237 protein_coding protein_coding MGP_129S1SvImJ_T0020052.1 MGP_129S1SvImJ_G0016062.1 mouse_genomes_project 1 59050752 59068643 - MGP_129S1SvImJ_P0020052 Tmem237 protein_coding protein_coding MGP_129S1SvImJ_T0020053.1 MGP_129S1SvImJ_G0016062.1 mouse_genomes_project 1 59056683 59068373 - MGP_129S1SvImJ_P0020053 Tmem237 protein_coding protein_coding MGP_129S1SvImJ_T0020054.1 MGP_129S1SvImJ_G0016062.1 mouse_genomes_project 1 59057272 59062580 - Tmem237 protein_coding retained_intron MGP_129S1SvImJ_T0020055.1 MGP_129S1SvImJ_G0016062.1 mouse_genomes_project 1 59057578 59068669 - MGP_129S1SvImJ_P0020055 Tmem237 protein_coding protein_coding MGP_129S1SvImJ_T0020056.1 MGP_129S1SvImJ_G0016062.1 mouse_genomes_project 1 59058359 59064222 - Tmem237 protein_coding retained_intron MGP_129S1SvImJ_T0020599.1 MGP_129S1SvImJ_G0016165.1 mouse_genomes_project 1 75495133 75499049 - MGP_129S1SvImJ_P0020599 Fev protein_coding protein_coding MGP_129S1SvImJ_T0020600.1 MGP_129S1SvImJ_G0016165.1 mouse_genomes_project 1 75495630 75498952 - MGP_129S1SvImJ_P0020600 Fev protein_coding protein_coding MGP_129S1SvImJ_T0020601.1 MGP_129S1SvImJ_G0016165.1 mouse_genomes_project 1 75496031 75498237 - Fev protein_coding retained_intron MGP_129S1SvImJ_T0023581.1 MGP_129S1SvImJ_G0016784.1 mouse_genomes_project 1 178130097 178156430 - MGP_129S1SvImJ_P0023581 Atp1a2 protein_coding protein_coding MGP_129S1SvImJ_T0023582.1 MGP_129S1SvImJ_G0016784.1 mouse_genomes_project 1 178132968 178156430 - Atp1a2 protein_coding retained_intron MGP_129S1SvImJ_T0023583.1 MGP_129S1SvImJ_G0016784.1 mouse_genomes_project 1 178134322 178134857 - Atp1a2 protein_coding retained_intron MGP_129S1SvImJ_T0023584.1 MGP_129S1SvImJ_G0016784.1 mouse_genomes_project 1 178136476 178156430 - MGP_129S1SvImJ_P0023584 Atp1a2 protein_coding protein_coding MGP_129S1SvImJ_T0023585.1 MGP_129S1SvImJ_G0016784.1 mouse_genomes_project 1 178142624 178156430 - Atp1a2 protein_coding retained_intron MGP_129S1SvImJ_T0023744.1 MGP_129S1SvImJ_G0016845.1 mouse_genomes_project 1 182879770 182960639 - MGP_129S1SvImJ_P0023744 Cep170 protein_coding protein_coding MGP_129S1SvImJ_T0023745.1 MGP_129S1SvImJ_G0016845.1 mouse_genomes_project 1 182879779 182967499 - MGP_129S1SvImJ_P0023745 Cep170 protein_coding protein_coding MGP_129S1SvImJ_T0023746.1 MGP_129S1SvImJ_G0016845.1 mouse_genomes_project 1 182879779 182905555 - MGP_129S1SvImJ_P0023746 Cep170 protein_coding protein_coding MGP_129S1SvImJ_T0023747.1 MGP_129S1SvImJ_G0016845.1 mouse_genomes_project 1 182879780 182945762 - MGP_129S1SvImJ_P0023747 Cep170 protein_coding protein_coding MGP_129S1SvImJ_T0023748.1 MGP_129S1SvImJ_G0016845.1 mouse_genomes_project 1 182880218 182900713 - Cep170 protein_coding retained_intron MGP_129S1SvImJ_T0023749.1 MGP_129S1SvImJ_G0016845.1 mouse_genomes_project 1 182880256 182906738 - MGP_129S1SvImJ_P0023749 Cep170 protein_coding protein_coding MGP_129S1SvImJ_T0023750.1 MGP_129S1SvImJ_G0016845.1 mouse_genomes_project 1 182880458 182945772 - MGP_129S1SvImJ_P0023750 Cep170 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023751.1 MGP_129S1SvImJ_G0016845.1 mouse_genomes_project 1 182881267 182900362 - MGP_129S1SvImJ_P0023751 Cep170 protein_coding protein_coding MGP_129S1SvImJ_T0023752.1 MGP_129S1SvImJ_G0016845.1 mouse_genomes_project 1 182881705 182904619 - Cep170 protein_coding processed_transcript MGP_129S1SvImJ_T0023753.1 MGP_129S1SvImJ_G0016845.1 mouse_genomes_project 1 182886600 182889223 - Cep170 protein_coding retained_intron MGP_129S1SvImJ_T0023754.1 MGP_129S1SvImJ_G0016845.1 mouse_genomes_project 1 182922943 182930432 - Cep170 protein_coding retained_intron MGP_129S1SvImJ_T0023755.1 MGP_129S1SvImJ_G0016845.1 mouse_genomes_project 1 182924702 182934442 - MGP_129S1SvImJ_P0023755 Cep170 protein_coding protein_coding MGP_129S1SvImJ_T0023756.1 MGP_129S1SvImJ_G0016845.1 mouse_genomes_project 1 182930566 182967499 - MGP_129S1SvImJ_P0023756 Cep170 protein_coding protein_coding MGP_129S1SvImJ_T0023757.1 MGP_129S1SvImJ_G0016845.1 mouse_genomes_project 1 182940530 182960645 - Cep170 protein_coding retained_intron MGP_129S1SvImJ_T0023758.1 MGP_129S1SvImJ_G0016845.1 mouse_genomes_project 1 182940607 182960639 - MGP_129S1SvImJ_P0023758 Cep170 protein_coding protein_coding MGP_129S1SvImJ_T0019395.1 MGP_129S1SvImJ_G0015935.1 mouse_genomes_project 1 35819116 35851583 + MGP_129S1SvImJ_P0019395 Cnga3 protein_coding protein_coding MGP_129S1SvImJ_T0019396.1 MGP_129S1SvImJ_G0015935.1 mouse_genomes_project 1 35823061 35873989 + MGP_129S1SvImJ_P0019396 Cnga3 protein_coding protein_coding MGP_129S1SvImJ_T0019397.1 MGP_129S1SvImJ_G0015935.1 mouse_genomes_project 1 35823061 35873989 + MGP_129S1SvImJ_P0019397 Cnga3 protein_coding protein_coding MGP_129S1SvImJ_T0019398.1 MGP_129S1SvImJ_G0015935.1 mouse_genomes_project 1 35823887 35875189 + MGP_129S1SvImJ_P0019398 Cnga3 protein_coding protein_coding MGP_129S1SvImJ_T0009551.1 MGP_129S1SvImJ_G0007667.1 mouse_genomes_project 1 156171521 156171579 + Mir7682 miRNA miRNA MGP_129S1SvImJ_T0020475.1 MGP_129S1SvImJ_G0016143.1 mouse_genomes_project 1 74821390 74822195 + MGP_129S1SvImJ_P0020475 Arpc2 protein_coding protein_coding MGP_129S1SvImJ_T0020476.1 MGP_129S1SvImJ_G0016143.1 mouse_genomes_project 1 74821803 74856161 + MGP_129S1SvImJ_P0020476 Arpc2 protein_coding protein_coding MGP_129S1SvImJ_T0020477.1 MGP_129S1SvImJ_G0016143.1 mouse_genomes_project 1 74821823 74855939 + MGP_129S1SvImJ_P0020477 Arpc2 protein_coding protein_coding MGP_129S1SvImJ_T0020478.1 MGP_129S1SvImJ_G0016143.1 mouse_genomes_project 1 74821856 74855940 + MGP_129S1SvImJ_P0020478 Arpc2 protein_coding protein_coding MGP_129S1SvImJ_T0099125.1 MGP_129S1SvImJ_G0037192.1 mouse_genomes_project 1 148984232 148984339 - Gm23672 snRNA snRNA MGP_129S1SvImJ_T0020756.1 MGP_129S1SvImJ_G0016187.1 mouse_genomes_project 1 76008605 76015889 + MGP_129S1SvImJ_P0020756 Gmppa protein_coding protein_coding MGP_129S1SvImJ_T0020757.1 MGP_129S1SvImJ_G0016187.1 mouse_genomes_project 1 76008618 76015888 + MGP_129S1SvImJ_P0020757 Gmppa protein_coding protein_coding MGP_129S1SvImJ_T0020758.1 MGP_129S1SvImJ_G0016187.1 mouse_genomes_project 1 76008636 76011551 + MGP_129S1SvImJ_P0020758 Gmppa protein_coding protein_coding MGP_129S1SvImJ_T0020759.1 MGP_129S1SvImJ_G0016187.1 mouse_genomes_project 1 76008642 76013212 + MGP_129S1SvImJ_P0020759 Gmppa protein_coding protein_coding MGP_129S1SvImJ_T0020760.1 MGP_129S1SvImJ_G0016187.1 mouse_genomes_project 1 76008643 76014228 + MGP_129S1SvImJ_P0020760 Gmppa protein_coding protein_coding MGP_129S1SvImJ_T0020761.1 MGP_129S1SvImJ_G0016187.1 mouse_genomes_project 1 76008657 76014322 + MGP_129S1SvImJ_P0020761 Gmppa protein_coding protein_coding MGP_129S1SvImJ_T0020762.1 MGP_129S1SvImJ_G0016187.1 mouse_genomes_project 1 76008659 76012099 + MGP_129S1SvImJ_P0020762 Gmppa protein_coding protein_coding MGP_129S1SvImJ_T0020763.1 MGP_129S1SvImJ_G0016187.1 mouse_genomes_project 1 76008762 76014237 + MGP_129S1SvImJ_P0020763 Gmppa protein_coding protein_coding MGP_129S1SvImJ_T0020764.1 MGP_129S1SvImJ_G0016187.1 mouse_genomes_project 1 76008788 76011004 + MGP_129S1SvImJ_P0020764 Gmppa protein_coding protein_coding MGP_129S1SvImJ_T0020765.1 MGP_129S1SvImJ_G0016187.1 mouse_genomes_project 1 76009617 76014743 + MGP_129S1SvImJ_P0020765 Gmppa protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020766.1 MGP_129S1SvImJ_G0016187.1 mouse_genomes_project 1 76014332 76015647 + Gmppa protein_coding retained_intron MGP_129S1SvImJ_T0020767.1 MGP_129S1SvImJ_G0016187.1 mouse_genomes_project 1 76014880 76015888 + Gmppa protein_coding retained_intron MGP_129S1SvImJ_T0020768.1 MGP_129S1SvImJ_G0016187.1 mouse_genomes_project 1 76014938 76015894 + Gmppa protein_coding retained_intron MGP_129S1SvImJ_T0099130.1 MGP_129S1SvImJ_G0037197.1 mouse_genomes_project 1 168802261 168802369 + Gm24940 snRNA snRNA MGP_129S1SvImJ_T0100309.1 MGP_129S1SvImJ_G0038376.1 mouse_genomes_project 1 8436752 8436880 - Gm24173 snoRNA snoRNA MGP_129S1SvImJ_T0019260.1 MGP_129S1SvImJ_G0015911.1 mouse_genomes_project 1 32933528 32942174 + MGP_129S1SvImJ_P0019260 Cfc1 protein_coding protein_coding MGP_129S1SvImJ_T0000454.1 MGP_129S1SvImJ_G0000394.1 mouse_genomes_project 1 30784870 30787546 + TEC TEC MGP_129S1SvImJ_T0005803.1 MGP_129S1SvImJ_G0004871.1 mouse_genomes_project 1 73948317 73966645 - Pinc lincRNA lincRNA MGP_129S1SvImJ_T0005804.1 MGP_129S1SvImJ_G0004871.1 mouse_genomes_project 1 73954365 73966645 - Pinc lincRNA lincRNA MGP_129S1SvImJ_T0000811.1 MGP_129S1SvImJ_G0000746.1 mouse_genomes_project 1 194042888 194046552 + TEC TEC MGP_129S1SvImJ_T0020148.1 MGP_129S1SvImJ_G0016077.1 mouse_genomes_project 1 60491449 60566355 + MGP_129S1SvImJ_P0020148 Abi2 protein_coding protein_coding MGP_129S1SvImJ_T0020149.1 MGP_129S1SvImJ_G0016077.1 mouse_genomes_project 1 60491525 60566355 + MGP_129S1SvImJ_P0020149 Abi2 protein_coding protein_coding MGP_129S1SvImJ_T0020150.1 MGP_129S1SvImJ_G0016077.1 mouse_genomes_project 1 60491525 60562285 + MGP_129S1SvImJ_P0020150 Abi2 protein_coding protein_coding MGP_129S1SvImJ_T0020151.1 MGP_129S1SvImJ_G0016077.1 mouse_genomes_project 1 60491564 60564715 + MGP_129S1SvImJ_P0020151 Abi2 protein_coding protein_coding MGP_129S1SvImJ_T0020152.1 MGP_129S1SvImJ_G0016077.1 mouse_genomes_project 1 60491611 60526798 + Abi2 protein_coding retained_intron MGP_129S1SvImJ_T0020153.1 MGP_129S1SvImJ_G0016077.1 mouse_genomes_project 1 60491625 60529323 + MGP_129S1SvImJ_P0020153 Abi2 protein_coding protein_coding MGP_129S1SvImJ_T0020154.1 MGP_129S1SvImJ_G0016077.1 mouse_genomes_project 1 60491633 60562355 + MGP_129S1SvImJ_P0020154 Abi2 protein_coding protein_coding MGP_129S1SvImJ_T0020155.1 MGP_129S1SvImJ_G0016077.1 mouse_genomes_project 1 60491638 60516660 + Abi2 protein_coding retained_intron MGP_129S1SvImJ_T0020156.1 MGP_129S1SvImJ_G0016077.1 mouse_genomes_project 1 60519246 60562955 + MGP_129S1SvImJ_P0020156 Abi2 protein_coding protein_coding MGP_129S1SvImJ_T0020157.1 MGP_129S1SvImJ_G0016077.1 mouse_genomes_project 1 60519370 60562117 + MGP_129S1SvImJ_P0020157 Abi2 protein_coding protein_coding MGP_129S1SvImJ_T0020158.1 MGP_129S1SvImJ_G0016077.1 mouse_genomes_project 1 60519375 60562280 + MGP_129S1SvImJ_P0020158 Abi2 protein_coding protein_coding MGP_129S1SvImJ_T0020159.1 MGP_129S1SvImJ_G0016077.1 mouse_genomes_project 1 60521105 60562501 + MGP_129S1SvImJ_P0020159 Abi2 protein_coding protein_coding MGP_129S1SvImJ_T0009560.1 MGP_129S1SvImJ_G0007676.1 mouse_genomes_project 1 171194737 171194880 + Gm44458 miRNA miRNA MGP_129S1SvImJ_T0021865.1 MGP_129S1SvImJ_G0016425.1 mouse_genomes_project 1 131173729 131324391 - MGP_129S1SvImJ_P0021865 Zranb3 protein_coding protein_coding MGP_129S1SvImJ_T0021866.1 MGP_129S1SvImJ_G0016425.1 mouse_genomes_project 1 131174215 131324930 - MGP_129S1SvImJ_P0021866 Zranb3 protein_coding protein_coding MGP_129S1SvImJ_T0021867.1 MGP_129S1SvImJ_G0016425.1 mouse_genomes_project 1 131185856 131193613 - Zranb3 protein_coding processed_transcript MGP_129S1SvImJ_T0021868.1 MGP_129S1SvImJ_G0016425.1 mouse_genomes_project 1 131207924 131324976 - Zranb3 protein_coding processed_transcript MGP_129S1SvImJ_T0021869.1 MGP_129S1SvImJ_G0016425.1 mouse_genomes_project 1 131217975 131324392 - Zranb3 protein_coding retained_intron MGP_129S1SvImJ_T0021870.1 MGP_129S1SvImJ_G0016425.1 mouse_genomes_project 1 131218363 131239661 - Zranb3 protein_coding processed_transcript MGP_129S1SvImJ_T0021871.1 MGP_129S1SvImJ_G0016425.1 mouse_genomes_project 1 131281557 131324383 - Zranb3 protein_coding retained_intron MGP_129S1SvImJ_T0012139.1 MGP_129S1SvImJ_G0010228.1 mouse_genomes_project 1 85187537 85188083 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012319.1 MGP_129S1SvImJ_G0010408.1 mouse_genomes_project 1 162678616 162678771 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005873.1 MGP_129S1SvImJ_G0004929.1 mouse_genomes_project 1 100377043 100395331 + Gm7967 lincRNA lincRNA MGP_129S1SvImJ_T0005874.1 MGP_129S1SvImJ_G0004929.1 mouse_genomes_project 1 100377044 100395091 + Gm7967 lincRNA lincRNA MGP_129S1SvImJ_T0002947.1 MGP_129S1SvImJ_G0002775.1 mouse_genomes_project 1 166410805 166417581 - 4930469G21Rik antisense antisense MGP_129S1SvImJ_T0002948.1 MGP_129S1SvImJ_G0002775.1 mouse_genomes_project 1 166413090 166417581 - 4930469G21Rik antisense antisense MGP_129S1SvImJ_T0000700.1 MGP_129S1SvImJ_G0000637.1 mouse_genomes_project 1 154034516 154035973 - TEC TEC MGP_129S1SvImJ_T0005852.1 MGP_129S1SvImJ_G0004910.1 mouse_genomes_project 1 92183561 92188186 + Gm9991 lincRNA lincRNA MGP_129S1SvImJ_T0023213.1 MGP_129S1SvImJ_G0016699.1 mouse_genomes_project 1 171375957 171519215 - MGP_129S1SvImJ_P0023213 Pou2f1 protein_coding protein_coding MGP_129S1SvImJ_T0023214.1 MGP_129S1SvImJ_G0016699.1 mouse_genomes_project 1 171375957 171446300 - MGP_129S1SvImJ_P0023214 Pou2f1 protein_coding protein_coding MGP_129S1SvImJ_T0023215.1 MGP_129S1SvImJ_G0016699.1 mouse_genomes_project 1 171386226 171424658 - MGP_129S1SvImJ_P0023215 Pou2f1 protein_coding protein_coding MGP_129S1SvImJ_T0023216.1 MGP_129S1SvImJ_G0016699.1 mouse_genomes_project 1 171386260 171519155 - MGP_129S1SvImJ_P0023216 Pou2f1 protein_coding protein_coding MGP_129S1SvImJ_T0023217.1 MGP_129S1SvImJ_G0016699.1 mouse_genomes_project 1 171386260 171519159 - MGP_129S1SvImJ_P0023217 Pou2f1 protein_coding protein_coding MGP_129S1SvImJ_T0023218.1 MGP_129S1SvImJ_G0016699.1 mouse_genomes_project 1 171386264 171446300 - MGP_129S1SvImJ_P0023218 Pou2f1 protein_coding protein_coding MGP_129S1SvImJ_T0023219.1 MGP_129S1SvImJ_G0016699.1 mouse_genomes_project 1 171386291 171390964 - MGP_129S1SvImJ_P0023219 Pou2f1 protein_coding protein_coding MGP_129S1SvImJ_T0023220.1 MGP_129S1SvImJ_G0016699.1 mouse_genomes_project 1 171386387 171402923 - Pou2f1 protein_coding retained_intron MGP_129S1SvImJ_T0023221.1 MGP_129S1SvImJ_G0016699.1 mouse_genomes_project 1 171386411 171519166 - MGP_129S1SvImJ_P0023221 Pou2f1 protein_coding protein_coding MGP_129S1SvImJ_T0023222.1 MGP_129S1SvImJ_G0016699.1 mouse_genomes_project 1 171386485 171446252 - MGP_129S1SvImJ_P0023222 Pou2f1 protein_coding protein_coding MGP_129S1SvImJ_T0023223.1 MGP_129S1SvImJ_G0016699.1 mouse_genomes_project 1 171386541 171443071 - MGP_129S1SvImJ_P0023223 Pou2f1 protein_coding protein_coding MGP_129S1SvImJ_T0023224.1 MGP_129S1SvImJ_G0016699.1 mouse_genomes_project 1 171390730 171446363 - Pou2f1 protein_coding retained_intron MGP_129S1SvImJ_T0023225.1 MGP_129S1SvImJ_G0016699.1 mouse_genomes_project 1 171390885 171446291 - Pou2f1 protein_coding retained_intron MGP_129S1SvImJ_T0023226.1 MGP_129S1SvImJ_G0016699.1 mouse_genomes_project 1 171401086 171519152 - Pou2f1 protein_coding retained_intron MGP_129S1SvImJ_T0023227.1 MGP_129S1SvImJ_G0016699.1 mouse_genomes_project 1 171422697 171519150 - MGP_129S1SvImJ_P0023227 Pou2f1 protein_coding protein_coding MGP_129S1SvImJ_T0023228.1 MGP_129S1SvImJ_G0016699.1 mouse_genomes_project 1 171441009 171519166 - Pou2f1 protein_coding retained_intron MGP_129S1SvImJ_T0023229.1 MGP_129S1SvImJ_G0016699.1 mouse_genomes_project 1 171443050 171519146 - MGP_129S1SvImJ_P0023229 Pou2f1 protein_coding protein_coding MGP_129S1SvImJ_T0000479.1 MGP_129S1SvImJ_G0000418.1 mouse_genomes_project 1 37445438 37445943 + TEC TEC MGP_129S1SvImJ_T0000579.1 MGP_129S1SvImJ_G0000518.1 mouse_genomes_project 1 88221029 88222586 + TEC TEC MGP_129S1SvImJ_T0099064.1 MGP_129S1SvImJ_G0037131.1 mouse_genomes_project 1 9682210 9682317 + Gm22633 snRNA snRNA MGP_129S1SvImJ_T0012126.1 MGP_129S1SvImJ_G0010215.1 mouse_genomes_project 1 81199571 81201653 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006020.1 MGP_129S1SvImJ_G0005047.1 mouse_genomes_project 1 186617941 186628088 - Gm37336 lincRNA lincRNA MGP_129S1SvImJ_T0006021.1 MGP_129S1SvImJ_G0005047.1 mouse_genomes_project 1 186627685 186628153 - Gm37336 lincRNA lincRNA MGP_129S1SvImJ_T0000592.1 MGP_129S1SvImJ_G0000531.1 mouse_genomes_project 1 93545206 93550784 + TEC TEC MGP_129S1SvImJ_T0000767.1 MGP_129S1SvImJ_G0000704.1 mouse_genomes_project 1 178758090 178758951 + TEC TEC MGP_129S1SvImJ_T0012265.1 MGP_129S1SvImJ_G0010354.1 mouse_genomes_project 1 140360839 140361121 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102065.1 MGP_129S1SvImJ_G0039900.1 mouse_genomes_project 1 89585909 89586767 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0022804.1 MGP_129S1SvImJ_G0016623.1 mouse_genomes_project 1 161266005 161378021 - MGP_129S1SvImJ_P0022804 Axdnd1 protein_coding protein_coding MGP_129S1SvImJ_T0022805.1 MGP_129S1SvImJ_G0016623.1 mouse_genomes_project 1 161266005 161376172 - MGP_129S1SvImJ_P0022805 Axdnd1 protein_coding protein_coding MGP_129S1SvImJ_T0022806.1 MGP_129S1SvImJ_G0016623.1 mouse_genomes_project 1 161273147 161377290 - MGP_129S1SvImJ_P0022806 Axdnd1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0022807.1 MGP_129S1SvImJ_G0016623.1 mouse_genomes_project 1 161273147 161376244 - MGP_129S1SvImJ_P0022807 Axdnd1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0022808.1 MGP_129S1SvImJ_G0016623.1 mouse_genomes_project 1 161302418 161323050 - Axdnd1 protein_coding processed_transcript MGP_129S1SvImJ_T0022809.1 MGP_129S1SvImJ_G0016623.1 mouse_genomes_project 1 161312032 161355800 - Axdnd1 protein_coding processed_transcript MGP_129S1SvImJ_T0022810.1 MGP_129S1SvImJ_G0016623.1 mouse_genomes_project 1 161312625 161354352 - MGP_129S1SvImJ_P0022810 Axdnd1 protein_coding protein_coding MGP_129S1SvImJ_T0022811.1 MGP_129S1SvImJ_G0016623.1 mouse_genomes_project 1 161355852 161358591 - Axdnd1 protein_coding processed_transcript MGP_129S1SvImJ_T0022812.1 MGP_129S1SvImJ_G0016623.1 mouse_genomes_project 1 161376222 161377748 - MGP_129S1SvImJ_P0022812 Axdnd1 protein_coding protein_coding MGP_129S1SvImJ_T0022813.1 MGP_129S1SvImJ_G0016623.1 mouse_genomes_project 1 161376222 161377784 - MGP_129S1SvImJ_P0022813 Axdnd1 protein_coding protein_coding MGP_129S1SvImJ_T0100345.1 MGP_129S1SvImJ_G0038412.1 mouse_genomes_project 1 67124025 67124155 + Gm25832 snoRNA snoRNA MGP_129S1SvImJ_T0000413.1 MGP_129S1SvImJ_G0000355.1 mouse_genomes_project 1 11501144 11504745 - TEC TEC MGP_129S1SvImJ_T0000740.1 MGP_129S1SvImJ_G0000677.1 mouse_genomes_project 1 165955092 165955519 - TEC TEC MGP_129S1SvImJ_T0100310.1 MGP_129S1SvImJ_G0038377.1 mouse_genomes_project 1 11149062 11149193 - Gm26273 snoRNA snoRNA MGP_129S1SvImJ_T0021644.1 MGP_129S1SvImJ_G0016380.1 mouse_genomes_project 1 109604432 109617420 + MGP_129S1SvImJ_P0021644 Serpinb11 protein_coding protein_coding MGP_129S1SvImJ_T0021645.1 MGP_129S1SvImJ_G0016380.1 mouse_genomes_project 1 109605163 109623707 + MGP_129S1SvImJ_P0021645 Serpinb11 protein_coding protein_coding MGP_129S1SvImJ_T0000527.1 MGP_129S1SvImJ_G0000466.1 mouse_genomes_project 1 67031154 67033709 - TEC TEC MGP_129S1SvImJ_T0000375.1 MGP_129S1SvImJ_G0000317.1 mouse_genomes_project 1 101226 102296 + TEC TEC MGP_129S1SvImJ_T0022115.1 MGP_129S1SvImJ_G0016479.1 mouse_genomes_project 1 136556769 136578344 + MGP_129S1SvImJ_P0022115 Pik3c2b protein_coding protein_coding MGP_129S1SvImJ_T0022116.1 MGP_129S1SvImJ_G0016479.1 mouse_genomes_project 1 136557114 136579148 + Pik3c2b protein_coding retained_intron MGP_129S1SvImJ_T0022117.1 MGP_129S1SvImJ_G0016479.1 mouse_genomes_project 1 136557114 136593492 + Pik3c2b protein_coding retained_intron MGP_129S1SvImJ_T0022118.1 MGP_129S1SvImJ_G0016479.1 mouse_genomes_project 1 136557114 136621008 + MGP_129S1SvImJ_P0022118 Pik3c2b protein_coding protein_coding MGP_129S1SvImJ_T0023282.1 MGP_129S1SvImJ_G0016715.1 mouse_genomes_project 1 173018651 173040507 - MGP_129S1SvImJ_P0023282 Lrrc52 protein_coding protein_coding MGP_129S1SvImJ_T0005870.1 MGP_129S1SvImJ_G0004927.1 mouse_genomes_project 1 99909496 99916202 + 1810006J02Rik lincRNA lincRNA MGP_129S1SvImJ_T0005871.1 MGP_129S1SvImJ_G0004927.1 mouse_genomes_project 1 99909507 99922659 + 1810006J02Rik lincRNA lincRNA MGP_129S1SvImJ_T0000511.1 MGP_129S1SvImJ_G0000450.1 mouse_genomes_project 1 60426295 60427352 + TEC TEC MGP_129S1SvImJ_T0011893.1 MGP_129S1SvImJ_G0009982.1 mouse_genomes_project 1 4863197 4865293 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000434.1 MGP_129S1SvImJ_G0000374.1 mouse_genomes_project 1 23204461 23207886 - TEC TEC MGP_129S1SvImJ_T0009495.1 MGP_129S1SvImJ_G0007611.1 mouse_genomes_project 1 41999015 41999100 + Gm24001 miRNA miRNA MGP_129S1SvImJ_T0023687.1 MGP_129S1SvImJ_G0016831.1 mouse_genomes_project 1 180483047 180493800 + MGP_129S1SvImJ_P0023687 Olfr414 protein_coding protein_coding MGP_129S1SvImJ_T0023688.1 MGP_129S1SvImJ_G0016831.1 mouse_genomes_project 1 180492678 180493633 + MGP_129S1SvImJ_P0023688 Olfr414 protein_coding protein_coding MGP_129S1SvImJ_T0102066.1 MGP_129S1SvImJ_G0039901.1 mouse_genomes_project 1 89591137 89591920 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002871.1 MGP_129S1SvImJ_G0002716.1 mouse_genomes_project 1 92843805 92862215 - Gm17090 antisense antisense MGP_129S1SvImJ_T0005755.1 MGP_129S1SvImJ_G0004834.1 mouse_genomes_project 1 55764904 55766130 + 1700003I22Rik lincRNA lincRNA MGP_129S1SvImJ_T0005756.1 MGP_129S1SvImJ_G0004834.1 mouse_genomes_project 1 55764949 55766064 + 1700003I22Rik lincRNA lincRNA MGP_129S1SvImJ_T0021061.1 MGP_129S1SvImJ_G0016247.1 mouse_genomes_project 1 87645067 87646979 - MGP_129S1SvImJ_P0021061 Nmur1 protein_coding protein_coding MGP_129S1SvImJ_T0002995.1 MGP_129S1SvImJ_G0002813.1 mouse_genomes_project 1 193500573 193504050 + antisense antisense MGP_129S1SvImJ_T0005830.1 MGP_129S1SvImJ_G0004890.1 mouse_genomes_project 1 83743217 83743758 + Gm28942 lincRNA lincRNA MGP_129S1SvImJ_T0012196.1 MGP_129S1SvImJ_G0010285.1 mouse_genomes_project 1 110871056 110871234 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020083.1 MGP_129S1SvImJ_G0016068.1 mouse_genomes_project 1 59555860 59650306 - Sumo1 protein_coding processed_transcript MGP_129S1SvImJ_T0020088.1 MGP_129S1SvImJ_G0016068.1 mouse_genomes_project 1 59614886 59650253 - MGP_129S1SvImJ_P0020088 Sumo1 protein_coding protein_coding MGP_129S1SvImJ_T0020089.1 MGP_129S1SvImJ_G0016068.1 mouse_genomes_project 1 59614977 59650205 - MGP_129S1SvImJ_P0020089 Sumo1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0020090.1 MGP_129S1SvImJ_G0016068.1 mouse_genomes_project 1 59618773 59650348 - Sumo1 protein_coding retained_intron MGP_129S1SvImJ_T0012083.1 MGP_129S1SvImJ_G0010172.1 mouse_genomes_project 1 62778178 62779265 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021892.1 MGP_129S1SvImJ_G0016428.1 mouse_genomes_project 1 131523028 131569118 - MGP_129S1SvImJ_P0021892 Lct protein_coding protein_coding MGP_129S1SvImJ_T0021893.1 MGP_129S1SvImJ_G0016428.1 mouse_genomes_project 1 131525844 131531315 - Lct protein_coding retained_intron MGP_129S1SvImJ_T0011990.1 MGP_129S1SvImJ_G0010079.1 mouse_genomes_project 1 35141689 35142034 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019821.1 MGP_129S1SvImJ_G0016019.1 mouse_genomes_project 1 52858984 52871505 + MGP_129S1SvImJ_P0019821 Osgepl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019822.1 MGP_129S1SvImJ_G0016019.1 mouse_genomes_project 1 52858987 52861963 + Osgepl1 protein_coding processed_transcript MGP_129S1SvImJ_T0019823.1 MGP_129S1SvImJ_G0016019.1 mouse_genomes_project 1 52858987 52863989 + Osgepl1 protein_coding retained_intron MGP_129S1SvImJ_T0019824.1 MGP_129S1SvImJ_G0016019.1 mouse_genomes_project 1 52858993 52869395 + MGP_129S1SvImJ_P0019824 Osgepl1 protein_coding protein_coding MGP_129S1SvImJ_T0019825.1 MGP_129S1SvImJ_G0016019.1 mouse_genomes_project 1 52859003 52871498 + MGP_129S1SvImJ_P0019825 Osgepl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020431.1 MGP_129S1SvImJ_G0016132.1 mouse_genomes_project 1 72933310 73050366 - MGP_129S1SvImJ_P0020431 March4 protein_coding protein_coding MGP_129S1SvImJ_T0012347.1 MGP_129S1SvImJ_G0010436.1 mouse_genomes_project 1 176676094 176676430 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002965.1 MGP_129S1SvImJ_G0002788.1 mouse_genomes_project 1 173617948 173741948 + Gm20711 antisense antisense MGP_129S1SvImJ_T0006015.1 MGP_129S1SvImJ_G0005042.1 mouse_genomes_project 1 182410943 182414506 + Gm38101 lincRNA lincRNA MGP_129S1SvImJ_T0012263.1 MGP_129S1SvImJ_G0010352.1 mouse_genomes_project 1 139657309 139657678 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012375.1 MGP_129S1SvImJ_G0010464.1 mouse_genomes_project 1 190024473 190024865 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019039.1 MGP_129S1SvImJ_G0015861.1 mouse_genomes_project 1 14675960 14696130 + MGP_129S1SvImJ_P0019039 Gdap1 protein_coding protein_coding MGP_129S1SvImJ_T0019040.1 MGP_129S1SvImJ_G0015861.1 mouse_genomes_project 1 14676002 14690600 + Gdap1 protein_coding retained_intron MGP_129S1SvImJ_T0019041.1 MGP_129S1SvImJ_G0015861.1 mouse_genomes_project 1 14676066 14693490 + MGP_129S1SvImJ_P0019041 Gdap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019042.1 MGP_129S1SvImJ_G0015861.1 mouse_genomes_project 1 14690225 14693908 + Gdap1 protein_coding retained_intron MGP_129S1SvImJ_T0009531.1 MGP_129S1SvImJ_G0007647.1 mouse_genomes_project 1 94965027 94965091 + Mir6902 miRNA miRNA MGP_129S1SvImJ_T0000378.1 MGP_129S1SvImJ_G0000320.1 mouse_genomes_project 1 452519 454828 - TEC TEC MGP_129S1SvImJ_T0098778.1 MGP_129S1SvImJ_G0036863.1 mouse_genomes_project 1 69439782 69455417 - Gm16076 sense_intronic sense_intronic MGP_129S1SvImJ_T0005920.1 MGP_129S1SvImJ_G0004965.1 mouse_genomes_project 1 135499182 135531630 + Gm26892 lincRNA lincRNA MGP_129S1SvImJ_T0006013.1 MGP_129S1SvImJ_G0005040.1 mouse_genomes_project 1 177224668 177240732 - Gm26641 lincRNA lincRNA MGP_129S1SvImJ_T0006082.1 MGP_129S1SvImJ_G0005093.1 mouse_genomes_project 1 202171526 202177811 - Gm32250 lincRNA lincRNA MGP_129S1SvImJ_T0012127.1 MGP_129S1SvImJ_G0010216.1 mouse_genomes_project 1 81802961 81803428 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024283.1 MGP_129S1SvImJ_G0016953.1 mouse_genomes_project 1 199231943 199564632 + MGP_129S1SvImJ_P0024283 Kcnh1 protein_coding protein_coding MGP_129S1SvImJ_T0024284.1 MGP_129S1SvImJ_G0016953.1 mouse_genomes_project 1 199231943 199564632 + MGP_129S1SvImJ_P0024284 Kcnh1 protein_coding protein_coding MGP_129S1SvImJ_T0024285.1 MGP_129S1SvImJ_G0016953.1 mouse_genomes_project 1 199490270 199564632 + MGP_129S1SvImJ_P0024285 Kcnh1 protein_coding protein_coding MGP_129S1SvImJ_T0005679.1 MGP_129S1SvImJ_G0004780.1 mouse_genomes_project 1 18293286 18301841 + lincRNA lincRNA MGP_129S1SvImJ_T0006042.1 MGP_129S1SvImJ_G0005063.1 mouse_genomes_project 1 191004585 191040541 + Gm37223 lincRNA lincRNA MGP_129S1SvImJ_T0006043.1 MGP_129S1SvImJ_G0005063.1 mouse_genomes_project 1 191004585 191040509 + Gm37223 lincRNA lincRNA MGP_129S1SvImJ_T0006044.1 MGP_129S1SvImJ_G0005063.1 mouse_genomes_project 1 191004585 191040538 + Gm37223 lincRNA lincRNA MGP_129S1SvImJ_T0006045.1 MGP_129S1SvImJ_G0005063.1 mouse_genomes_project 1 191004589 191044236 + Gm37223 lincRNA lincRNA MGP_129S1SvImJ_T0006046.1 MGP_129S1SvImJ_G0005063.1 mouse_genomes_project 1 191004600 191044264 + Gm37223 lincRNA lincRNA MGP_129S1SvImJ_T0006048.1 MGP_129S1SvImJ_G0005063.1 mouse_genomes_project 1 191032659 191044236 + Gm37223 lincRNA lincRNA MGP_129S1SvImJ_T0006058.1 MGP_129S1SvImJ_G0005073.1 mouse_genomes_project 1 192474673 192490610 + Gm38093 lincRNA lincRNA MGP_129S1SvImJ_T0021757.1 MGP_129S1SvImJ_G0016402.1 mouse_genomes_project 1 122848814 122855453 - MGP_129S1SvImJ_P0021757 Tmem37 protein_coding protein_coding MGP_129S1SvImJ_T0000389.1 MGP_129S1SvImJ_G0000331.1 mouse_genomes_project 1 4090122 4093047 - TEC TEC MGP_129S1SvImJ_T0000749.1 MGP_129S1SvImJ_G0000686.1 mouse_genomes_project 1 168495880 168497863 + TEC TEC MGP_129S1SvImJ_T0024217.1 MGP_129S1SvImJ_G0016938.1 mouse_genomes_project 1 198083615 198098183 + MGP_129S1SvImJ_P0024217 Nsl1 protein_coding protein_coding MGP_129S1SvImJ_T0024218.1 MGP_129S1SvImJ_G0016938.1 mouse_genomes_project 1 198083627 198099909 + MGP_129S1SvImJ_P0024218 Nsl1 protein_coding protein_coding MGP_129S1SvImJ_T0024219.1 MGP_129S1SvImJ_G0016938.1 mouse_genomes_project 1 198083634 198109516 + MGP_129S1SvImJ_P0024219 Nsl1 protein_coding protein_coding MGP_129S1SvImJ_T0012243.1 MGP_129S1SvImJ_G0010332.1 mouse_genomes_project 1 126755223 126756416 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000475.1 MGP_129S1SvImJ_G0000414.1 mouse_genomes_project 1 35942664 35943198 - TEC TEC MGP_129S1SvImJ_T0005970.1 MGP_129S1SvImJ_G0005006.1 mouse_genomes_project 1 159962525 159983840 - Gm9530 lincRNA lincRNA MGP_129S1SvImJ_T0019262.1 MGP_129S1SvImJ_G0015913.1 mouse_genomes_project 1 32985676 32996575 + MGP_129S1SvImJ_P0019262 Amer3 protein_coding protein_coding MGP_129S1SvImJ_T0002795.1 MGP_129S1SvImJ_G0002658.1 mouse_genomes_project 1 33243230 33245788 - Gm38336 antisense antisense MGP_129S1SvImJ_T0023804.1 MGP_129S1SvImJ_G0016858.1 mouse_genomes_project 1 185281183 185883303 - MGP_129S1SvImJ_P0023804 Smyd3 protein_coding protein_coding MGP_129S1SvImJ_T0023805.1 MGP_129S1SvImJ_G0016858.1 mouse_genomes_project 1 185284269 185595141 - Smyd3 protein_coding processed_transcript MGP_129S1SvImJ_T0023806.1 MGP_129S1SvImJ_G0016858.1 mouse_genomes_project 1 185284374 185732608 - Smyd3 protein_coding processed_transcript MGP_129S1SvImJ_T0023807.1 MGP_129S1SvImJ_G0016858.1 mouse_genomes_project 1 185286572 185321332 - Smyd3 protein_coding processed_transcript MGP_129S1SvImJ_T0023808.1 MGP_129S1SvImJ_G0016858.1 mouse_genomes_project 1 185736924 185766343 - Smyd3 protein_coding processed_transcript MGP_129S1SvImJ_T0023809.1 MGP_129S1SvImJ_G0016858.1 mouse_genomes_project 1 185754279 185883310 - MGP_129S1SvImJ_P0023809 Smyd3 protein_coding protein_coding MGP_129S1SvImJ_T0023810.1 MGP_129S1SvImJ_G0016858.1 mouse_genomes_project 1 185871418 185883274 - MGP_129S1SvImJ_P0023810 Smyd3 protein_coding protein_coding MGP_129S1SvImJ_T0019047.1 MGP_129S1SvImJ_G0015864.1 mouse_genomes_project 1 15693248 15723749 - Crisp4 protein_coding retained_intron MGP_129S1SvImJ_T0019048.1 MGP_129S1SvImJ_G0015864.1 mouse_genomes_project 1 15693248 15723755 - MGP_129S1SvImJ_P0019048 Crisp4 protein_coding protein_coding MGP_129S1SvImJ_T0019049.1 MGP_129S1SvImJ_G0015864.1 mouse_genomes_project 1 15693261 15715532 - MGP_129S1SvImJ_P0019049 Crisp4 protein_coding protein_coding MGP_129S1SvImJ_T0019050.1 MGP_129S1SvImJ_G0015864.1 mouse_genomes_project 1 15693657 15723755 - MGP_129S1SvImJ_P0019050 Crisp4 protein_coding protein_coding MGP_129S1SvImJ_T0006066.1 MGP_129S1SvImJ_G0005079.1 mouse_genomes_project 1 195099558 195112520 + Gm38064 lincRNA lincRNA MGP_129S1SvImJ_T0017111.1 MGP_129S1SvImJ_G0015123.1 mouse_genomes_project 1 175620906 175622427 - Gm15852 processed_transcript processed_transcript MGP_129S1SvImJ_T0017080.1 MGP_129S1SvImJ_G0015119.1 mouse_genomes_project 1 164773235 164847551 + Gm10530 processed_transcript sense_intronic MGP_129S1SvImJ_T0017081.1 MGP_129S1SvImJ_G0015119.1 mouse_genomes_project 1 164844336 164847551 + Gm10530 processed_transcript lincRNA MGP_129S1SvImJ_T0023916.1 MGP_129S1SvImJ_G0016877.1 mouse_genomes_project 1 187379114 187384434 + MGP_129S1SvImJ_P0023916 Pycr2 protein_coding protein_coding MGP_129S1SvImJ_T0023917.1 MGP_129S1SvImJ_G0016877.1 mouse_genomes_project 1 187379130 187382970 + Pycr2 protein_coding retained_intron MGP_129S1SvImJ_T0023918.1 MGP_129S1SvImJ_G0016877.1 mouse_genomes_project 1 187379144 187384433 + Pycr2 protein_coding retained_intron MGP_129S1SvImJ_T0023919.1 MGP_129S1SvImJ_G0016877.1 mouse_genomes_project 1 187382265 187383253 + Pycr2 protein_coding retained_intron MGP_129S1SvImJ_T0018764.1 MGP_129S1SvImJ_G0015814.1 mouse_genomes_project 1 1949452 2060296 - MGP_129S1SvImJ_P0018764 Rgs20 protein_coding protein_coding MGP_129S1SvImJ_T0018765.1 MGP_129S1SvImJ_G0015814.1 mouse_genomes_project 1 1949455 2111778 - MGP_129S1SvImJ_P0018765 Rgs20 protein_coding protein_coding MGP_129S1SvImJ_T0018766.1 MGP_129S1SvImJ_G0015814.1 mouse_genomes_project 1 1950296 2060296 - MGP_129S1SvImJ_P0018766 Rgs20 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018767.1 MGP_129S1SvImJ_G0015814.1 mouse_genomes_project 1 1952164 2111775 - MGP_129S1SvImJ_P0018767 Rgs20 protein_coding protein_coding MGP_129S1SvImJ_T0018768.1 MGP_129S1SvImJ_G0015814.1 mouse_genomes_project 1 1965409 2060296 - Rgs20 protein_coding retained_intron MGP_129S1SvImJ_T0018769.1 MGP_129S1SvImJ_G0015814.1 mouse_genomes_project 1 2103086 2111766 - Rgs20 protein_coding processed_transcript MGP_129S1SvImJ_T0005786.1 MGP_129S1SvImJ_G0004859.1 mouse_genomes_project 1 67518892 67597871 + Gm15668 lincRNA lincRNA MGP_129S1SvImJ_T0020602.1 MGP_129S1SvImJ_G0016166.1 mouse_genomes_project 1 75503446 75506657 - MGP_129S1SvImJ_P0020602 Cryba2 protein_coding protein_coding MGP_129S1SvImJ_T0020603.1 MGP_129S1SvImJ_G0016166.1 mouse_genomes_project 1 75504043 75506406 - MGP_129S1SvImJ_P0020603 Cryba2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020646.1 MGP_129S1SvImJ_G0016175.1 mouse_genomes_project 1 75743097 75755320 - MGP_129S1SvImJ_P0020646 Atg9a protein_coding protein_coding MGP_129S1SvImJ_T0020647.1 MGP_129S1SvImJ_G0016175.1 mouse_genomes_project 1 75743102 75755590 - MGP_129S1SvImJ_P0020647 Atg9a protein_coding protein_coding MGP_129S1SvImJ_T0020648.1 MGP_129S1SvImJ_G0016175.1 mouse_genomes_project 1 75743102 75755317 - MGP_129S1SvImJ_P0020648 Atg9a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020649.1 MGP_129S1SvImJ_G0016175.1 mouse_genomes_project 1 75743102 75753776 - MGP_129S1SvImJ_P0020649 Atg9a protein_coding protein_coding MGP_129S1SvImJ_T0020650.1 MGP_129S1SvImJ_G0016175.1 mouse_genomes_project 1 75743103 75755317 - MGP_129S1SvImJ_P0020650 Atg9a protein_coding protein_coding MGP_129S1SvImJ_T0020651.1 MGP_129S1SvImJ_G0016175.1 mouse_genomes_project 1 75746383 75749441 - MGP_129S1SvImJ_P0020651 Atg9a protein_coding protein_coding MGP_129S1SvImJ_T0020652.1 MGP_129S1SvImJ_G0016175.1 mouse_genomes_project 1 75750950 75755119 - Atg9a protein_coding retained_intron MGP_129S1SvImJ_T0020653.1 MGP_129S1SvImJ_G0016175.1 mouse_genomes_project 1 75753162 75755356 - Atg9a protein_coding retained_intron MGP_129S1SvImJ_T0020654.1 MGP_129S1SvImJ_G0016175.1 mouse_genomes_project 1 75753510 75755108 - MGP_129S1SvImJ_P0020654 Atg9a protein_coding protein_coding MGP_129S1SvImJ_T0019320.1 MGP_129S1SvImJ_G0015922.1 mouse_genomes_project 1 34899630 34951354 + MGP_129S1SvImJ_P0019320 Fer1l5 protein_coding protein_coding MGP_129S1SvImJ_T0019321.1 MGP_129S1SvImJ_G0015922.1 mouse_genomes_project 1 34912800 34934071 + MGP_129S1SvImJ_P0019321 Fer1l5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019322.1 MGP_129S1SvImJ_G0015922.1 mouse_genomes_project 1 34946134 34951357 + MGP_129S1SvImJ_P0019322 Fer1l5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0005771.1 MGP_129S1SvImJ_G0004847.1 mouse_genomes_project 1 61527549 61556438 + Gm11588 lincRNA lincRNA MGP_129S1SvImJ_T0019062.1 MGP_129S1SvImJ_G0015869.1 mouse_genomes_project 1 17674547 17748594 - MGP_129S1SvImJ_P0019062 Pkhd1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0019063.1 MGP_129S1SvImJ_G0015869.1 mouse_genomes_project 1 17674551 18227449 - MGP_129S1SvImJ_P0019063 Pkhd1 protein_coding protein_coding MGP_129S1SvImJ_T0019064.1 MGP_129S1SvImJ_G0015869.1 mouse_genomes_project 1 17816367 18227336 - MGP_129S1SvImJ_P0019064 Pkhd1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0019065.1 MGP_129S1SvImJ_G0015869.1 mouse_genomes_project 1 17990441 18033562 - Pkhd1 protein_coding processed_transcript MGP_129S1SvImJ_T0019066.1 MGP_129S1SvImJ_G0015869.1 mouse_genomes_project 1 18205316 18227449 - Pkhd1 protein_coding retained_intron MGP_129S1SvImJ_T0019067.1 MGP_129S1SvImJ_G0015869.1 mouse_genomes_project 1 18215079 18227425 - Pkhd1 protein_coding processed_transcript MGP_129S1SvImJ_T0019458.1 MGP_129S1SvImJ_G0015947.1 mouse_genomes_project 1 36643336 36655461 - MGP_129S1SvImJ_P0019458 Txndc9 protein_coding protein_coding MGP_129S1SvImJ_T0019459.1 MGP_129S1SvImJ_G0015947.1 mouse_genomes_project 1 36645541 36656039 - MGP_129S1SvImJ_P0019459 Txndc9 protein_coding protein_coding MGP_129S1SvImJ_T0019460.1 MGP_129S1SvImJ_G0015947.1 mouse_genomes_project 1 36645541 36655389 - MGP_129S1SvImJ_P0019460 Txndc9 protein_coding protein_coding MGP_129S1SvImJ_T0019461.1 MGP_129S1SvImJ_G0015947.1 mouse_genomes_project 1 36645543 36655370 - Txndc9 protein_coding retained_intron MGP_129S1SvImJ_T0019462.1 MGP_129S1SvImJ_G0015947.1 mouse_genomes_project 1 36645787 36653991 - MGP_129S1SvImJ_P0019462 Txndc9 protein_coding protein_coding MGP_129S1SvImJ_T0019463.1 MGP_129S1SvImJ_G0015947.1 mouse_genomes_project 1 36645790 36655762 - MGP_129S1SvImJ_P0019463 Txndc9 protein_coding protein_coding MGP_129S1SvImJ_T0019464.1 MGP_129S1SvImJ_G0015947.1 mouse_genomes_project 1 36648405 36654804 - MGP_129S1SvImJ_P0019464 Txndc9 protein_coding protein_coding MGP_129S1SvImJ_T0019465.1 MGP_129S1SvImJ_G0015947.1 mouse_genomes_project 1 36654060 36655408 - Txndc9 protein_coding retained_intron MGP_129S1SvImJ_T0019372.1 MGP_129S1SvImJ_G0015932.1 mouse_genomes_project 1 35322764 35345120 + MGP_129S1SvImJ_P0019372 Zap70 protein_coding protein_coding MGP_129S1SvImJ_T0019373.1 MGP_129S1SvImJ_G0015932.1 mouse_genomes_project 1 35327900 35333332 + MGP_129S1SvImJ_P0019373 Zap70 protein_coding protein_coding MGP_129S1SvImJ_T0019374.1 MGP_129S1SvImJ_G0015932.1 mouse_genomes_project 1 35333256 35334640 + Zap70 protein_coding retained_intron MGP_129S1SvImJ_T0019375.1 MGP_129S1SvImJ_G0015932.1 mouse_genomes_project 1 35341266 35345117 + Zap70 protein_coding retained_intron MGP_129S1SvImJ_T0019034.1 MGP_129S1SvImJ_G0015859.1 mouse_genomes_project 1 14204426 14208510 + Ly96 protein_coding retained_intron MGP_129S1SvImJ_T0019035.1 MGP_129S1SvImJ_G0015859.1 mouse_genomes_project 1 14204808 14228362 + MGP_129S1SvImJ_P0019035 Ly96 protein_coding protein_coding MGP_129S1SvImJ_T0019036.1 MGP_129S1SvImJ_G0015859.1 mouse_genomes_project 1 14204883 14228286 + MGP_129S1SvImJ_P0019036 Ly96 protein_coding protein_coding MGP_129S1SvImJ_T0022504.1 MGP_129S1SvImJ_G0016563.1 mouse_genomes_project 1 148106616 148134529 - MGP_129S1SvImJ_P0022504 Trove2 protein_coding protein_coding MGP_129S1SvImJ_T0022505.1 MGP_129S1SvImJ_G0016563.1 mouse_genomes_project 1 148111742 148134383 - Trove2 protein_coding retained_intron MGP_129S1SvImJ_T0098780.1 MGP_129S1SvImJ_G0036865.1 mouse_genomes_project 1 70023537 70025416 - Gm28112 sense_intronic sense_intronic MGP_129S1SvImJ_T0023075.1 MGP_129S1SvImJ_G0016666.1 mouse_genomes_project 1 168242376 168272619 - MGP_129S1SvImJ_P0023075 Fmo2 protein_coding protein_coding MGP_129S1SvImJ_T0023076.1 MGP_129S1SvImJ_G0016666.1 mouse_genomes_project 1 168242381 168256445 - Fmo2 protein_coding retained_intron MGP_129S1SvImJ_T0023077.1 MGP_129S1SvImJ_G0016666.1 mouse_genomes_project 1 168244495 168272572 - MGP_129S1SvImJ_P0023077 Fmo2 protein_coding protein_coding MGP_129S1SvImJ_T0023078.1 MGP_129S1SvImJ_G0016666.1 mouse_genomes_project 1 168246098 168248791 - Fmo2 protein_coding processed_transcript MGP_129S1SvImJ_T0023079.1 MGP_129S1SvImJ_G0016666.1 mouse_genomes_project 1 168257497 168272391 - MGP_129S1SvImJ_P0023079 Fmo2 protein_coding protein_coding MGP_129S1SvImJ_T0023080.1 MGP_129S1SvImJ_G0016666.1 mouse_genomes_project 1 168258007 168272633 - Fmo2 protein_coding retained_intron MGP_129S1SvImJ_T0023081.1 MGP_129S1SvImJ_G0016666.1 mouse_genomes_project 1 168271587 168272627 - Fmo2 protein_coding retained_intron MGP_129S1SvImJ_T0006016.1 MGP_129S1SvImJ_G0005043.1 mouse_genomes_project 1 182569700 182674392 - lincRNA lincRNA MGP_129S1SvImJ_T0021534.1 MGP_129S1SvImJ_G0016353.1 mouse_genomes_project 1 95697269 95712982 - MGP_129S1SvImJ_P0021534 Pdcd1 protein_coding protein_coding MGP_129S1SvImJ_T0012097.1 MGP_129S1SvImJ_G0010186.1 mouse_genomes_project 1 65769519 65770293 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002884.1 MGP_129S1SvImJ_G0002727.1 mouse_genomes_project 1 107013872 107014789 - Gm15699 antisense antisense MGP_129S1SvImJ_T0022855.1 MGP_129S1SvImJ_G0016630.1 mouse_genomes_project 1 162100414 162109892 - MGP_129S1SvImJ_P0022855 Tex35 protein_coding protein_coding MGP_129S1SvImJ_T0022856.1 MGP_129S1SvImJ_G0016630.1 mouse_genomes_project 1 162100414 162109892 - MGP_129S1SvImJ_P0022856 Tex35 protein_coding protein_coding MGP_129S1SvImJ_T0022857.1 MGP_129S1SvImJ_G0016630.1 mouse_genomes_project 1 162100422 162109891 - MGP_129S1SvImJ_P0022857 Tex35 protein_coding protein_coding MGP_129S1SvImJ_T0022858.1 MGP_129S1SvImJ_G0016630.1 mouse_genomes_project 1 162100429 162109922 - MGP_129S1SvImJ_P0022858 Tex35 protein_coding protein_coding MGP_129S1SvImJ_T0022859.1 MGP_129S1SvImJ_G0016630.1 mouse_genomes_project 1 162100588 162109630 - MGP_129S1SvImJ_P0022859 Tex35 protein_coding protein_coding MGP_129S1SvImJ_T0022860.1 MGP_129S1SvImJ_G0016630.1 mouse_genomes_project 1 162100590 162109887 - MGP_129S1SvImJ_P0022860 Tex35 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0002938.1 MGP_129S1SvImJ_G0002766.1 mouse_genomes_project 1 160759135 160801505 + Gm37571 antisense antisense MGP_129S1SvImJ_T0099100.1 MGP_129S1SvImJ_G0037167.1 mouse_genomes_project 1 95456452 95456554 - Gm22089 snRNA snRNA MGP_129S1SvImJ_T0099113.1 MGP_129S1SvImJ_G0037180.1 mouse_genomes_project 1 132173477 132173588 - Gm23056 snRNA snRNA MGP_129S1SvImJ_T0012159.1 MGP_129S1SvImJ_G0010248.1 mouse_genomes_project 1 95853546 95854388 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012191.1 MGP_129S1SvImJ_G0010280.1 mouse_genomes_project 1 109347484 109348329 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002849.1 MGP_129S1SvImJ_G0002699.1 mouse_genomes_project 1 73534440 73578989 + 1700027A15Rik antisense antisense MGP_129S1SvImJ_T0002850.1 MGP_129S1SvImJ_G0002699.1 mouse_genomes_project 1 73570567 73579772 + 1700027A15Rik antisense antisense MGP_129S1SvImJ_T0002851.1 MGP_129S1SvImJ_G0002699.1 mouse_genomes_project 1 73570912 73579763 + 1700027A15Rik antisense antisense MGP_129S1SvImJ_T0002852.1 MGP_129S1SvImJ_G0002699.1 mouse_genomes_project 1 73576818 73579764 + 1700027A15Rik antisense antisense MGP_129S1SvImJ_T0002853.1 MGP_129S1SvImJ_G0002699.1 mouse_genomes_project 1 73578833 73579772 + 1700027A15Rik antisense antisense MGP_129S1SvImJ_T0005902.1 MGP_129S1SvImJ_G0004951.1 mouse_genomes_project 1 123634166 123658177 + Gm29345 lincRNA lincRNA MGP_129S1SvImJ_T0000781.1 MGP_129S1SvImJ_G0000718.1 mouse_genomes_project 1 183386850 183387646 - TEC TEC MGP_129S1SvImJ_T0019019.1 MGP_129S1SvImJ_G0015857.1 mouse_genomes_project 1 14153682 14168819 - MGP_129S1SvImJ_P0019019 Tceb1 protein_coding protein_coding MGP_129S1SvImJ_T0019020.1 MGP_129S1SvImJ_G0015857.1 mouse_genomes_project 1 14154724 14168977 - MGP_129S1SvImJ_P0019020 Tceb1 protein_coding protein_coding MGP_129S1SvImJ_T0019021.1 MGP_129S1SvImJ_G0015857.1 mouse_genomes_project 1 14155099 14168953 - MGP_129S1SvImJ_P0019021 Tceb1 protein_coding protein_coding MGP_129S1SvImJ_T0019022.1 MGP_129S1SvImJ_G0015857.1 mouse_genomes_project 1 14155126 14168973 - MGP_129S1SvImJ_P0019022 Tceb1 protein_coding protein_coding MGP_129S1SvImJ_T0019023.1 MGP_129S1SvImJ_G0015857.1 mouse_genomes_project 1 14155148 14168849 - MGP_129S1SvImJ_P0019023 Tceb1 protein_coding protein_coding MGP_129S1SvImJ_T0019024.1 MGP_129S1SvImJ_G0015857.1 mouse_genomes_project 1 14155299 14159967 - MGP_129S1SvImJ_P0019024 Tceb1 protein_coding protein_coding MGP_129S1SvImJ_T0019025.1 MGP_129S1SvImJ_G0015857.1 mouse_genomes_project 1 14155429 14168560 - MGP_129S1SvImJ_P0019025 Tceb1 protein_coding protein_coding MGP_129S1SvImJ_T0019026.1 MGP_129S1SvImJ_G0015857.1 mouse_genomes_project 1 14158763 14168835 - Tceb1 protein_coding retained_intron MGP_129S1SvImJ_T0019027.1 MGP_129S1SvImJ_G0015857.1 mouse_genomes_project 1 14158882 14168850 - Tceb1 protein_coding retained_intron MGP_129S1SvImJ_T0019028.1 MGP_129S1SvImJ_G0015857.1 mouse_genomes_project 1 14159608 14168813 - Tceb1 protein_coding retained_intron MGP_129S1SvImJ_T0019029.1 MGP_129S1SvImJ_G0015857.1 mouse_genomes_project 1 14159663 14168977 - Tceb1 protein_coding retained_intron MGP_129S1SvImJ_T0019894.1 MGP_129S1SvImJ_G0016033.1 mouse_genomes_project 1 54897211 54959647 - MGP_129S1SvImJ_P0019894 Rftn2 protein_coding protein_coding MGP_129S1SvImJ_T0019895.1 MGP_129S1SvImJ_G0016033.1 mouse_genomes_project 1 54898800 54959647 - MGP_129S1SvImJ_P0019895 Rftn2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019896.1 MGP_129S1SvImJ_G0016033.1 mouse_genomes_project 1 54933496 54959647 - MGP_129S1SvImJ_P0019896 Rftn2 protein_coding protein_coding MGP_129S1SvImJ_T0019897.1 MGP_129S1SvImJ_G0016033.1 mouse_genomes_project 1 54935790 54939491 - Rftn2 protein_coding processed_transcript MGP_129S1SvImJ_T0019898.1 MGP_129S1SvImJ_G0016033.1 mouse_genomes_project 1 54956806 54959647 - Rftn2 protein_coding processed_transcript MGP_129S1SvImJ_T0012256.1 MGP_129S1SvImJ_G0010345.1 mouse_genomes_project 1 135074307 135074768 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100341.1 MGP_129S1SvImJ_G0038408.1 mouse_genomes_project 1 63321410 63321488 + Gm26457 snoRNA snoRNA MGP_129S1SvImJ_T0012117.1 MGP_129S1SvImJ_G0010206.1 mouse_genomes_project 1 76129856 76130204 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002973.1 MGP_129S1SvImJ_G0002794.1 mouse_genomes_project 1 177939231 177941994 - Gm37756 antisense antisense MGP_129S1SvImJ_T0002845.1 MGP_129S1SvImJ_G0002698.1 mouse_genomes_project 1 72090343 72095024 + Apol7d antisense antisense MGP_129S1SvImJ_T0002846.1 MGP_129S1SvImJ_G0002698.1 mouse_genomes_project 1 72090394 72099616 + Apol7d antisense antisense MGP_129S1SvImJ_T0002847.1 MGP_129S1SvImJ_G0002698.1 mouse_genomes_project 1 72090841 72100406 + Apol7d antisense antisense MGP_129S1SvImJ_T0002848.1 MGP_129S1SvImJ_G0002698.1 mouse_genomes_project 1 72090845 72094812 + Apol7d antisense antisense MGP_129S1SvImJ_T0000503.1 MGP_129S1SvImJ_G0000442.1 mouse_genomes_project 1 55698503 55698856 - TEC TEC MGP_129S1SvImJ_T0009486.1 MGP_129S1SvImJ_G0007602.1 mouse_genomes_project 1 27577515 27577640 + Mir6342 miRNA miRNA MGP_129S1SvImJ_T0005822.1 MGP_129S1SvImJ_G0004885.1 mouse_genomes_project 1 79582836 79584231 + Gm29187 lincRNA lincRNA MGP_129S1SvImJ_T0023921.1 MGP_129S1SvImJ_G0016879.1 mouse_genomes_project 1 187426540 187436338 + MGP_129S1SvImJ_P0023921 Tmem63a protein_coding protein_coding MGP_129S1SvImJ_T0023922.1 MGP_129S1SvImJ_G0016879.1 mouse_genomes_project 1 187426654 187439038 + MGP_129S1SvImJ_P0023922 Tmem63a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023923.1 MGP_129S1SvImJ_G0016879.1 mouse_genomes_project 1 187426655 187459222 + MGP_129S1SvImJ_P0023923 Tmem63a protein_coding protein_coding MGP_129S1SvImJ_T0023924.1 MGP_129S1SvImJ_G0016879.1 mouse_genomes_project 1 187426770 187440156 + MGP_129S1SvImJ_P0023924 Tmem63a protein_coding protein_coding MGP_129S1SvImJ_T0023925.1 MGP_129S1SvImJ_G0016879.1 mouse_genomes_project 1 187428231 187459213 + MGP_129S1SvImJ_P0023925 Tmem63a protein_coding protein_coding MGP_129S1SvImJ_T0023926.1 MGP_129S1SvImJ_G0016879.1 mouse_genomes_project 1 187430102 187430911 + MGP_129S1SvImJ_P0023926 Tmem63a protein_coding protein_coding MGP_129S1SvImJ_T0023927.1 MGP_129S1SvImJ_G0016879.1 mouse_genomes_project 1 187430158 187433035 + MGP_129S1SvImJ_P0023927 Tmem63a protein_coding protein_coding MGP_129S1SvImJ_T0023928.1 MGP_129S1SvImJ_G0016879.1 mouse_genomes_project 1 187444217 187444992 + Tmem63a protein_coding retained_intron MGP_129S1SvImJ_T0000495.1 MGP_129S1SvImJ_G0000434.1 mouse_genomes_project 1 52172956 52174871 - TEC TEC MGP_129S1SvImJ_T0002861.1 MGP_129S1SvImJ_G0002706.1 mouse_genomes_project 1 75961210 75965455 - Gm15178 antisense antisense MGP_129S1SvImJ_T0009563.1 MGP_129S1SvImJ_G0007679.1 mouse_genomes_project 1 174128178 174128298 + Mir6348 miRNA miRNA MGP_129S1SvImJ_T0019820.1 MGP_129S1SvImJ_G0016018.1 mouse_genomes_project 1 52840687 52863366 + MGP_129S1SvImJ_P0019820 Gm28778 protein_coding protein_coding MGP_129S1SvImJ_T0022797.1 MGP_129S1SvImJ_G0016621.1 mouse_genomes_project 1 161188504 161246462 - MGP_129S1SvImJ_P0022797 Tdrd5 protein_coding protein_coding MGP_129S1SvImJ_T0022798.1 MGP_129S1SvImJ_G0016621.1 mouse_genomes_project 1 161188506 161246141 - MGP_129S1SvImJ_P0022798 Tdrd5 protein_coding protein_coding MGP_129S1SvImJ_T0022799.1 MGP_129S1SvImJ_G0016621.1 mouse_genomes_project 1 161192995 161196733 - Tdrd5 protein_coding processed_transcript MGP_129S1SvImJ_T0022800.1 MGP_129S1SvImJ_G0016621.1 mouse_genomes_project 1 161200230 161213524 - Tdrd5 protein_coding retained_intron MGP_129S1SvImJ_T0022801.1 MGP_129S1SvImJ_G0016621.1 mouse_genomes_project 1 161235504 161246399 - MGP_129S1SvImJ_P0022801 Tdrd5 protein_coding protein_coding MGP_129S1SvImJ_T0019603.1 MGP_129S1SvImJ_G0015979.1 mouse_genomes_project 1 42093086 42136638 - MGP_129S1SvImJ_P0019603 Fhl2 protein_coding protein_coding MGP_129S1SvImJ_T0006049.1 MGP_129S1SvImJ_G0005065.1 mouse_genomes_project 1 191191805 191224829 - 1700112H15Rik lincRNA lincRNA MGP_129S1SvImJ_T0012385.1 MGP_129S1SvImJ_G0010474.1 mouse_genomes_project 1 196758285 196758547 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012034.1 MGP_129S1SvImJ_G0010123.1 mouse_genomes_project 1 48802756 48804168 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102063.1 MGP_129S1SvImJ_G0039898.1 mouse_genomes_project 1 89554401 89554616 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0000614.1 MGP_129S1SvImJ_G0000553.1 mouse_genomes_project 1 122385276 122386202 - TEC TEC MGP_129S1SvImJ_T0011972.1 MGP_129S1SvImJ_G0010061.1 mouse_genomes_project 1 31723893 31726149 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018783.1 MGP_129S1SvImJ_G0015817.1 mouse_genomes_project 1 3099759 3103451 - MGP_129S1SvImJ_P0018783 Npbwr1 protein_coding protein_coding MGP_129S1SvImJ_T0012336.1 MGP_129S1SvImJ_G0010425.1 mouse_genomes_project 1 171237151 171238213 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012032.1 MGP_129S1SvImJ_G0010121.1 mouse_genomes_project 1 48559696 48559911 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012305.1 MGP_129S1SvImJ_G0010394.1 mouse_genomes_project 1 157732439 157733142 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012253.1 MGP_129S1SvImJ_G0010342.1 mouse_genomes_project 1 133517296 133517705 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022411.1 MGP_129S1SvImJ_G0016544.1 mouse_genomes_project 1 140727829 140864494 - MGP_129S1SvImJ_P0022411 Nr5a2 protein_coding protein_coding MGP_129S1SvImJ_T0022412.1 MGP_129S1SvImJ_G0016544.1 mouse_genomes_project 1 140729542 140852287 - MGP_129S1SvImJ_P0022412 Nr5a2 protein_coding protein_coding MGP_129S1SvImJ_T0022413.1 MGP_129S1SvImJ_G0016544.1 mouse_genomes_project 1 140730580 140864426 - MGP_129S1SvImJ_P0022413 Nr5a2 protein_coding protein_coding MGP_129S1SvImJ_T0022414.1 MGP_129S1SvImJ_G0016544.1 mouse_genomes_project 1 140730729 140856144 - MGP_129S1SvImJ_P0022414 Nr5a2 protein_coding protein_coding MGP_129S1SvImJ_T0022415.1 MGP_129S1SvImJ_G0016544.1 mouse_genomes_project 1 140780719 140841018 - Nr5a2 protein_coding retained_intron MGP_129S1SvImJ_T0022416.1 MGP_129S1SvImJ_G0016544.1 mouse_genomes_project 1 140841419 140851898 - MGP_129S1SvImJ_P0022416 Nr5a2 protein_coding protein_coding MGP_129S1SvImJ_T0002865.1 MGP_129S1SvImJ_G0002710.1 mouse_genomes_project 1 87524163 87551185 - Gm16341 antisense antisense MGP_129S1SvImJ_T0000532.1 MGP_129S1SvImJ_G0000471.1 mouse_genomes_project 1 68182683 68184984 + TEC TEC MGP_129S1SvImJ_T0000435.1 MGP_129S1SvImJ_G0000375.1 mouse_genomes_project 1 23216643 23219176 - TEC TEC MGP_129S1SvImJ_T0000581.1 MGP_129S1SvImJ_G0000520.1 mouse_genomes_project 1 88369859 88372787 + TEC TEC MGP_129S1SvImJ_T0019138.1 MGP_129S1SvImJ_G0015890.1 mouse_genomes_project 1 22108358 22307338 - Col19a1 protein_coding processed_transcript MGP_129S1SvImJ_T0019139.1 MGP_129S1SvImJ_G0015890.1 mouse_genomes_project 1 22110463 22446826 - MGP_129S1SvImJ_P0019139 Col19a1 protein_coding protein_coding MGP_129S1SvImJ_T0019140.1 MGP_129S1SvImJ_G0015890.1 mouse_genomes_project 1 22126259 22446765 - MGP_129S1SvImJ_P0019140 Col19a1 protein_coding protein_coding MGP_129S1SvImJ_T0020275.1 MGP_129S1SvImJ_G0016101.1 mouse_genomes_project 1 65238763 65241390 - MGP_129S1SvImJ_P0020275 Cryge protein_coding protein_coding MGP_129S1SvImJ_T0020276.1 MGP_129S1SvImJ_G0016101.1 mouse_genomes_project 1 65238766 65241360 - MGP_129S1SvImJ_P0020276 Cryge protein_coding protein_coding MGP_129S1SvImJ_T0000380.1 MGP_129S1SvImJ_G0000322.1 mouse_genomes_project 1 584332 586998 - TEC TEC MGP_129S1SvImJ_T0012257.1 MGP_129S1SvImJ_G0010346.1 mouse_genomes_project 1 135759481 135760447 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009566.1 MGP_129S1SvImJ_G0007682.1 mouse_genomes_project 1 176834353 176834415 - Mir6546 miRNA miRNA MGP_129S1SvImJ_T0021637.1 MGP_129S1SvImJ_G0016376.1 mouse_genomes_project 1 109179638 109199784 + MGP_129S1SvImJ_P0021637 Serpinb13 protein_coding protein_coding MGP_129S1SvImJ_T0021638.1 MGP_129S1SvImJ_G0016376.1 mouse_genomes_project 1 109179648 109199487 + MGP_129S1SvImJ_P0021638 Serpinb13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020520.1 MGP_129S1SvImJ_G0016151.1 mouse_genomes_project 1 75008414 75034543 + MGP_129S1SvImJ_P0020520 Vil1 protein_coding protein_coding MGP_129S1SvImJ_T0020521.1 MGP_129S1SvImJ_G0016151.1 mouse_genomes_project 1 75018004 75021969 + MGP_129S1SvImJ_P0020521 Vil1 protein_coding protein_coding MGP_129S1SvImJ_T0020522.1 MGP_129S1SvImJ_G0016151.1 mouse_genomes_project 1 75020367 75021962 + Vil1 protein_coding retained_intron MGP_129S1SvImJ_T0020523.1 MGP_129S1SvImJ_G0016151.1 mouse_genomes_project 1 75022632 75024912 + Vil1 protein_coding retained_intron MGP_129S1SvImJ_T0000449.1 MGP_129S1SvImJ_G0000389.1 mouse_genomes_project 1 23721442 23721772 - TEC TEC MGP_129S1SvImJ_T0099149.1 MGP_129S1SvImJ_G0037216.1 mouse_genomes_project 1 198827454 198827558 - Gm22446 snRNA snRNA MGP_129S1SvImJ_T0000481.1 MGP_129S1SvImJ_G0000420.1 mouse_genomes_project 1 38154552 38155437 - TEC TEC MGP_129S1SvImJ_T0100343.1 MGP_129S1SvImJ_G0038410.1 mouse_genomes_project 1 63321737 63321869 + Snora41 snoRNA snoRNA MGP_129S1SvImJ_T0021321.1 MGP_129S1SvImJ_G0016307.1 mouse_genomes_project 1 92908980 92916752 + MGP_129S1SvImJ_P0021321 Fam132b protein_coding protein_coding MGP_129S1SvImJ_T0021322.1 MGP_129S1SvImJ_G0016307.1 mouse_genomes_project 1 92913244 92916627 + MGP_129S1SvImJ_P0021322 Fam132b protein_coding protein_coding MGP_129S1SvImJ_T0099119.1 MGP_129S1SvImJ_G0037186.1 mouse_genomes_project 1 140559917 140560015 + Gm24086 snRNA snRNA MGP_129S1SvImJ_T0002964.1 MGP_129S1SvImJ_G0002787.1 mouse_genomes_project 1 172791807 172802344 + Gm37982 antisense antisense MGP_129S1SvImJ_T0022389.1 MGP_129S1SvImJ_G0016539.1 mouse_genomes_project 1 140076512 140077589 - MGP_129S1SvImJ_P0022389 Gpr25 protein_coding protein_coding MGP_129S1SvImJ_T0011867.1 MGP_129S1SvImJ_G0009956.1 mouse_genomes_project 1 519609 520535 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102047.1 MGP_129S1SvImJ_G0039882.1 mouse_genomes_project 1 19056550 19057645 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0012226.1 MGP_129S1SvImJ_G0010315.1 mouse_genomes_project 1 122245155 122245548 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012057.1 MGP_129S1SvImJ_G0010146.1 mouse_genomes_project 1 55110229 55111122 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019847.1 MGP_129S1SvImJ_G0016025.1 mouse_genomes_project 1 54065702 54105787 - MGP_129S1SvImJ_P0019847 Gtf3c3 protein_coding protein_coding MGP_129S1SvImJ_T0019848.1 MGP_129S1SvImJ_G0016025.1 mouse_genomes_project 1 54086404 54090310 - Gtf3c3 protein_coding retained_intron MGP_129S1SvImJ_T0019849.1 MGP_129S1SvImJ_G0016025.1 mouse_genomes_project 1 54093559 54095167 - Gtf3c3 protein_coding retained_intron MGP_129S1SvImJ_T0099067.1 MGP_129S1SvImJ_G0037134.1 mouse_genomes_project 1 23168164 23168271 - Gm22260 snRNA snRNA MGP_129S1SvImJ_T0011897.1 MGP_129S1SvImJ_G0009986.1 mouse_genomes_project 1 6002550 6002748 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012230.1 MGP_129S1SvImJ_G0010319.1 mouse_genomes_project 1 122671872 122672536 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000673.1 MGP_129S1SvImJ_G0000611.1 mouse_genomes_project 1 141907340 141911208 + TEC TEC MGP_129S1SvImJ_T0022826.1 MGP_129S1SvImJ_G0016626.1 mouse_genomes_project 1 161622128 161644665 - MGP_129S1SvImJ_P0022826 Tor3a protein_coding protein_coding MGP_129S1SvImJ_T0022827.1 MGP_129S1SvImJ_G0016626.1 mouse_genomes_project 1 161622128 161644665 - MGP_129S1SvImJ_P0022827 Tor3a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022828.1 MGP_129S1SvImJ_G0016626.1 mouse_genomes_project 1 161622128 161644634 - MGP_129S1SvImJ_P0022828 Tor3a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022829.1 MGP_129S1SvImJ_G0016626.1 mouse_genomes_project 1 161623534 161644623 - MGP_129S1SvImJ_P0022829 Tor3a protein_coding protein_coding MGP_129S1SvImJ_T0022830.1 MGP_129S1SvImJ_G0016626.1 mouse_genomes_project 1 161624182 161626969 - Tor3a protein_coding processed_transcript MGP_129S1SvImJ_T0022831.1 MGP_129S1SvImJ_G0016626.1 mouse_genomes_project 1 161630432 161637061 - Tor3a protein_coding processed_transcript MGP_129S1SvImJ_T0022832.1 MGP_129S1SvImJ_G0016626.1 mouse_genomes_project 1 161637022 161644644 - MGP_129S1SvImJ_P0022832 Tor3a protein_coding protein_coding MGP_129S1SvImJ_T0002919.1 MGP_129S1SvImJ_G0002751.1 mouse_genomes_project 1 139357494 139372696 + Gm4793 antisense antisense MGP_129S1SvImJ_T0102049.1 MGP_129S1SvImJ_G0039884.1 mouse_genomes_project 1 51644373 51645261 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0000626.1 MGP_129S1SvImJ_G0000565.1 mouse_genomes_project 1 126440667 126442160 - TEC TEC MGP_129S1SvImJ_T0000646.1 MGP_129S1SvImJ_G0000585.1 mouse_genomes_project 1 133172050 133175207 + TEC TEC MGP_129S1SvImJ_T0012392.1 MGP_129S1SvImJ_G0010481.1 mouse_genomes_project 1 199888394 199888848 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099097.1 MGP_129S1SvImJ_G0037164.1 mouse_genomes_project 1 88692868 88692975 - Gm22549 snRNA snRNA MGP_129S1SvImJ_T0100383.1 MGP_129S1SvImJ_G0038450.1 mouse_genomes_project 1 165865072 165865204 + Gm23528 snoRNA snoRNA MGP_129S1SvImJ_T0019056.1 MGP_129S1SvImJ_G0015868.1 mouse_genomes_project 1 16820308 16852237 + MGP_129S1SvImJ_P0019056 Tfap2b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0019057.1 MGP_129S1SvImJ_G0015868.1 mouse_genomes_project 1 16822777 16852233 + MGP_129S1SvImJ_P0019057 Tfap2b protein_coding protein_coding MGP_129S1SvImJ_T0019058.1 MGP_129S1SvImJ_G0015868.1 mouse_genomes_project 1 16822823 16851740 + MGP_129S1SvImJ_P0019058 Tfap2b protein_coding protein_coding MGP_129S1SvImJ_T0019059.1 MGP_129S1SvImJ_G0015868.1 mouse_genomes_project 1 16825877 16848283 + MGP_129S1SvImJ_P0019059 Tfap2b protein_coding protein_coding MGP_129S1SvImJ_T0019060.1 MGP_129S1SvImJ_G0015868.1 mouse_genomes_project 1 16826129 16828223 + Tfap2b protein_coding retained_intron MGP_129S1SvImJ_T0019061.1 MGP_129S1SvImJ_G0015868.1 mouse_genomes_project 1 16827659 16833040 + Tfap2b protein_coding retained_intron MGP_129S1SvImJ_T0000721.1 MGP_129S1SvImJ_G0000658.1 mouse_genomes_project 1 161837139 161839782 - TEC TEC MGP_129S1SvImJ_T0102000.1 MGP_129S1SvImJ_G0039860.1 mouse_genomes_project 1 64082766 64100812 + unitary_pseudogene unitary_pseudogene MGP_129S1SvImJ_T0005891.1 MGP_129S1SvImJ_G0004943.1 mouse_genomes_project 1 121779117 121780492 + Gm26831 lincRNA lincRNA MGP_129S1SvImJ_T0023995.1 MGP_129S1SvImJ_G0016894.1 mouse_genomes_project 1 189035966 189092796 + MGP_129S1SvImJ_P0023995 Trp53bp2 protein_coding protein_coding MGP_129S1SvImJ_T0023996.1 MGP_129S1SvImJ_G0016894.1 mouse_genomes_project 1 189070147 189092146 + Trp53bp2 protein_coding retained_intron MGP_129S1SvImJ_T0023997.1 MGP_129S1SvImJ_G0016894.1 mouse_genomes_project 1 189072799 189077987 + MGP_129S1SvImJ_P0023997 Trp53bp2 protein_coding protein_coding MGP_129S1SvImJ_T0012118.1 MGP_129S1SvImJ_G0010207.1 mouse_genomes_project 1 76155679 76156171 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009562.1 MGP_129S1SvImJ_G0007678.1 mouse_genomes_project 1 172902490 172902864 - miRNA miRNA MGP_129S1SvImJ_T0012352.1 MGP_129S1SvImJ_G0010441.1 mouse_genomes_project 1 177571296 177571848 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012082.1 MGP_129S1SvImJ_G0010171.1 mouse_genomes_project 1 62200960 62201219 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022057.1 MGP_129S1SvImJ_G0016468.1 mouse_genomes_project 1 135696337 135697057 - MGP_129S1SvImJ_P0022057 Gm10188 protein_coding protein_coding MGP_129S1SvImJ_T0005767.1 MGP_129S1SvImJ_G0004843.1 mouse_genomes_project 1 60860349 60882379 + 2310016D23Rik lincRNA lincRNA MGP_129S1SvImJ_T0012072.1 MGP_129S1SvImJ_G0010161.1 mouse_genomes_project 1 60784594 60785660 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012030.1 MGP_129S1SvImJ_G0010119.1 mouse_genomes_project 1 48156302 48157233 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000826.1 MGP_129S1SvImJ_G0000760.1 mouse_genomes_project 1 200599350 200601496 + TEC TEC MGP_129S1SvImJ_T0022024.1 MGP_129S1SvImJ_G0016464.1 mouse_genomes_project 1 135466746 135488881 + MGP_129S1SvImJ_P0022024 Elk4 protein_coding protein_coding MGP_129S1SvImJ_T0022025.1 MGP_129S1SvImJ_G0016464.1 mouse_genomes_project 1 135467013 135486094 + MGP_129S1SvImJ_P0022025 Elk4 protein_coding protein_coding MGP_129S1SvImJ_T0022026.1 MGP_129S1SvImJ_G0016464.1 mouse_genomes_project 1 135467236 135475486 + Elk4 protein_coding processed_transcript MGP_129S1SvImJ_T0022027.1 MGP_129S1SvImJ_G0016464.1 mouse_genomes_project 1 135467246 135475344 + Elk4 protein_coding processed_transcript MGP_129S1SvImJ_T0022028.1 MGP_129S1SvImJ_G0016464.1 mouse_genomes_project 1 135467434 135479156 + MGP_129S1SvImJ_P0022028 Elk4 protein_coding protein_coding MGP_129S1SvImJ_T0022029.1 MGP_129S1SvImJ_G0016464.1 mouse_genomes_project 1 135478658 135495048 + MGP_129S1SvImJ_P0022029 Elk4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022030.1 MGP_129S1SvImJ_G0016464.1 mouse_genomes_project 1 135479293 135494130 + Elk4 protein_coding processed_transcript MGP_129S1SvImJ_T0000556.1 MGP_129S1SvImJ_G0000495.1 mouse_genomes_project 1 81141353 81143171 - TEC TEC MGP_129S1SvImJ_T0005929.1 MGP_129S1SvImJ_G0004974.1 mouse_genomes_project 1 139379351 139462727 - Gm38399 lincRNA lincRNA MGP_129S1SvImJ_T0019251.1 MGP_129S1SvImJ_G0015909.1 mouse_genomes_project 1 32847093 32848388 + Ptpn18 protein_coding retained_intron MGP_129S1SvImJ_T0019252.1 MGP_129S1SvImJ_G0015909.1 mouse_genomes_project 1 32847096 32864345 + MGP_129S1SvImJ_P0019252 Ptpn18 protein_coding protein_coding MGP_129S1SvImJ_T0019253.1 MGP_129S1SvImJ_G0015909.1 mouse_genomes_project 1 32847108 32862478 + MGP_129S1SvImJ_P0019253 Ptpn18 protein_coding protein_coding MGP_129S1SvImJ_T0019254.1 MGP_129S1SvImJ_G0015909.1 mouse_genomes_project 1 32847123 32862477 + Ptpn18 protein_coding retained_intron MGP_129S1SvImJ_T0019255.1 MGP_129S1SvImJ_G0015909.1 mouse_genomes_project 1 32850601 32855035 + Ptpn18 protein_coding retained_intron MGP_129S1SvImJ_T0019256.1 MGP_129S1SvImJ_G0015909.1 mouse_genomes_project 1 32863280 32866294 + MGP_129S1SvImJ_P0019256 Ptpn18 protein_coding protein_coding MGP_129S1SvImJ_T0019257.1 MGP_129S1SvImJ_G0015909.1 mouse_genomes_project 1 32865059 32866294 + Ptpn18 protein_coding processed_transcript MGP_129S1SvImJ_T0000539.1 MGP_129S1SvImJ_G0000478.1 mouse_genomes_project 1 70699868 70702268 - TEC TEC MGP_129S1SvImJ_T0023685.1 MGP_129S1SvImJ_G0016829.1 mouse_genomes_project 1 180442772 180443702 + MGP_129S1SvImJ_P0023685 Olfr417 protein_coding protein_coding MGP_129S1SvImJ_T0011993.1 MGP_129S1SvImJ_G0010082.1 mouse_genomes_project 1 37396987 37397489 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002814.1 MGP_129S1SvImJ_G0002673.1 mouse_genomes_project 1 39501084 39507283 - Gm37623 antisense antisense MGP_129S1SvImJ_T0023316.1 MGP_129S1SvImJ_G0016725.1 mouse_genomes_project 1 175828004 175863456 - MGP_129S1SvImJ_P0023316 Uap1 protein_coding protein_coding MGP_129S1SvImJ_T0023317.1 MGP_129S1SvImJ_G0016725.1 mouse_genomes_project 1 175828068 175863445 - MGP_129S1SvImJ_P0023317 Uap1 protein_coding protein_coding MGP_129S1SvImJ_T0023318.1 MGP_129S1SvImJ_G0016725.1 mouse_genomes_project 1 175828069 175863445 - MGP_129S1SvImJ_P0023318 Uap1 protein_coding protein_coding MGP_129S1SvImJ_T0023319.1 MGP_129S1SvImJ_G0016725.1 mouse_genomes_project 1 175828100 175829780 - Uap1 protein_coding retained_intron MGP_129S1SvImJ_T0023320.1 MGP_129S1SvImJ_G0016725.1 mouse_genomes_project 1 175835698 175863291 - Uap1 protein_coding retained_intron MGP_129S1SvImJ_T0023321.1 MGP_129S1SvImJ_G0016725.1 mouse_genomes_project 1 175848331 175848907 - Uap1 protein_coding processed_transcript MGP_129S1SvImJ_T0023322.1 MGP_129S1SvImJ_G0016725.1 mouse_genomes_project 1 175848349 175863265 - Uap1 protein_coding processed_transcript MGP_129S1SvImJ_T0023323.1 MGP_129S1SvImJ_G0016725.1 mouse_genomes_project 1 175853284 175863288 - Uap1 protein_coding retained_intron MGP_129S1SvImJ_T0023324.1 MGP_129S1SvImJ_G0016725.1 mouse_genomes_project 1 175856300 175863385 - Uap1 protein_coding processed_transcript MGP_129S1SvImJ_T0024200.1 MGP_129S1SvImJ_G0016935.1 mouse_genomes_project 1 198020770 198026775 - Mfsd7b protein_coding retained_intron MGP_129S1SvImJ_T0024201.1 MGP_129S1SvImJ_G0016935.1 mouse_genomes_project 1 198020770 198043307 - MGP_129S1SvImJ_P0024201 Mfsd7b protein_coding protein_coding MGP_129S1SvImJ_T0024202.1 MGP_129S1SvImJ_G0016935.1 mouse_genomes_project 1 198020772 198043116 - MGP_129S1SvImJ_P0024202 Mfsd7b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024203.1 MGP_129S1SvImJ_G0016935.1 mouse_genomes_project 1 198020773 198023378 - Mfsd7b protein_coding retained_intron MGP_129S1SvImJ_T0024204.1 MGP_129S1SvImJ_G0016935.1 mouse_genomes_project 1 198027843 198030111 - Mfsd7b protein_coding retained_intron MGP_129S1SvImJ_T0024205.1 MGP_129S1SvImJ_G0016935.1 mouse_genomes_project 1 198042057 198043273 - MGP_129S1SvImJ_P0024205 Mfsd7b protein_coding protein_coding MGP_129S1SvImJ_T0012065.1 MGP_129S1SvImJ_G0010154.1 mouse_genomes_project 1 58714956 58715407 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018738.1 MGP_129S1SvImJ_G0015809.1 mouse_genomes_project 1 1522568 1528047 - MGP_129S1SvImJ_P0018738 Sox17 protein_coding protein_coding MGP_129S1SvImJ_T0018739.1 MGP_129S1SvImJ_G0015809.1 mouse_genomes_project 1 1522887 1528391 - MGP_129S1SvImJ_P0018739 Sox17 protein_coding protein_coding MGP_129S1SvImJ_T0018740.1 MGP_129S1SvImJ_G0015809.1 mouse_genomes_project 1 1523027 1528988 - MGP_129S1SvImJ_P0018740 Sox17 protein_coding protein_coding MGP_129S1SvImJ_T0018741.1 MGP_129S1SvImJ_G0015809.1 mouse_genomes_project 1 1523350 1527997 - MGP_129S1SvImJ_P0018741 Sox17 protein_coding protein_coding MGP_129S1SvImJ_T0018742.1 MGP_129S1SvImJ_G0015809.1 mouse_genomes_project 1 1524094 1525242 - Sox17 protein_coding retained_intron MGP_129S1SvImJ_T0018743.1 MGP_129S1SvImJ_G0015809.1 mouse_genomes_project 1 1524095 1527964 - MGP_129S1SvImJ_P0018743 Sox17 protein_coding protein_coding MGP_129S1SvImJ_T0018744.1 MGP_129S1SvImJ_G0015809.1 mouse_genomes_project 1 1524102 1525373 - MGP_129S1SvImJ_P0018744 Sox17 protein_coding protein_coding MGP_129S1SvImJ_T0018745.1 MGP_129S1SvImJ_G0015809.1 mouse_genomes_project 1 1524104 1528030 - MGP_129S1SvImJ_P0018745 Sox17 protein_coding protein_coding MGP_129S1SvImJ_T0022491.1 MGP_129S1SvImJ_G0016562.1 mouse_genomes_project 1 148067733 148101600 + Glrx2 protein_coding retained_intron MGP_129S1SvImJ_T0022492.1 MGP_129S1SvImJ_G0016562.1 mouse_genomes_project 1 148091330 148101602 + MGP_129S1SvImJ_P0022492 Glrx2 protein_coding protein_coding MGP_129S1SvImJ_T0022493.1 MGP_129S1SvImJ_G0016562.1 mouse_genomes_project 1 148091858 148097577 + Glrx2 protein_coding processed_transcript MGP_129S1SvImJ_T0022494.1 MGP_129S1SvImJ_G0016562.1 mouse_genomes_project 1 148091858 148105230 + MGP_129S1SvImJ_P0022494 Glrx2 protein_coding protein_coding MGP_129S1SvImJ_T0022495.1 MGP_129S1SvImJ_G0016562.1 mouse_genomes_project 1 148091867 148097943 + Glrx2 protein_coding retained_intron MGP_129S1SvImJ_T0022496.1 MGP_129S1SvImJ_G0016562.1 mouse_genomes_project 1 148091911 148097680 + Glrx2 protein_coding processed_transcript MGP_129S1SvImJ_T0022497.1 MGP_129S1SvImJ_G0016562.1 mouse_genomes_project 1 148091916 148101602 + MGP_129S1SvImJ_P0022497 Glrx2 protein_coding protein_coding MGP_129S1SvImJ_T0022498.1 MGP_129S1SvImJ_G0016562.1 mouse_genomes_project 1 148091919 148100437 + MGP_129S1SvImJ_P0022498 Glrx2 protein_coding protein_coding MGP_129S1SvImJ_T0022499.1 MGP_129S1SvImJ_G0016562.1 mouse_genomes_project 1 148091947 148102136 + MGP_129S1SvImJ_P0022499 Glrx2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022500.1 MGP_129S1SvImJ_G0016562.1 mouse_genomes_project 1 148092676 148105505 + MGP_129S1SvImJ_P0022500 Glrx2 protein_coding protein_coding MGP_129S1SvImJ_T0022501.1 MGP_129S1SvImJ_G0016562.1 mouse_genomes_project 1 148098252 148100502 + Glrx2 protein_coding retained_intron MGP_129S1SvImJ_T0022502.1 MGP_129S1SvImJ_G0016562.1 mouse_genomes_project 1 148099820 148101524 + Glrx2 protein_coding retained_intron MGP_129S1SvImJ_T0022503.1 MGP_129S1SvImJ_G0016562.1 mouse_genomes_project 1 148100808 148101601 + Glrx2 protein_coding processed_transcript MGP_129S1SvImJ_T0011277.1 MGP_129S1SvImJ_G0009393.1 mouse_genomes_project 1 170991968 170992219 - Gm23599 misc_RNA misc_RNA MGP_129S1SvImJ_T0023837.1 MGP_129S1SvImJ_G0016865.1 mouse_genomes_project 1 186364043 186577725 + MGP_129S1SvImJ_P0023837 Cdc42bpa protein_coding protein_coding MGP_129S1SvImJ_T0023838.1 MGP_129S1SvImJ_G0016865.1 mouse_genomes_project 1 186364156 186580261 + MGP_129S1SvImJ_P0023838 Cdc42bpa protein_coding protein_coding MGP_129S1SvImJ_T0023839.1 MGP_129S1SvImJ_G0016865.1 mouse_genomes_project 1 186364331 186521799 + MGP_129S1SvImJ_P0023839 Cdc42bpa protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023840.1 MGP_129S1SvImJ_G0016865.1 mouse_genomes_project 1 186364724 186576735 + MGP_129S1SvImJ_P0023840 Cdc42bpa protein_coding protein_coding MGP_129S1SvImJ_T0023841.1 MGP_129S1SvImJ_G0016865.1 mouse_genomes_project 1 186364724 186576735 + MGP_129S1SvImJ_P0023841 Cdc42bpa protein_coding protein_coding MGP_129S1SvImJ_T0023842.1 MGP_129S1SvImJ_G0016865.1 mouse_genomes_project 1 186364724 186576735 + MGP_129S1SvImJ_P0023842 Cdc42bpa protein_coding unknown_likely_coding MGP_129S1SvImJ_T0023843.1 MGP_129S1SvImJ_G0016865.1 mouse_genomes_project 1 186380142 186449779 + Cdc42bpa protein_coding processed_transcript MGP_129S1SvImJ_T0023844.1 MGP_129S1SvImJ_G0016865.1 mouse_genomes_project 1 186396121 186444757 + Cdc42bpa protein_coding retained_intron MGP_129S1SvImJ_T0023845.1 MGP_129S1SvImJ_G0016865.1 mouse_genomes_project 1 186494304 186504754 + Cdc42bpa protein_coding retained_intron MGP_129S1SvImJ_T0023846.1 MGP_129S1SvImJ_G0016865.1 mouse_genomes_project 1 186511051 186577157 + MGP_129S1SvImJ_P0023846 Cdc42bpa protein_coding protein_coding MGP_129S1SvImJ_T0023847.1 MGP_129S1SvImJ_G0016865.1 mouse_genomes_project 1 186516924 186529605 + Cdc42bpa protein_coding retained_intron MGP_129S1SvImJ_T0023848.1 MGP_129S1SvImJ_G0016865.1 mouse_genomes_project 1 186518899 186522074 + Cdc42bpa protein_coding retained_intron MGP_129S1SvImJ_T0023849.1 MGP_129S1SvImJ_G0016865.1 mouse_genomes_project 1 186519099 186580260 + MGP_129S1SvImJ_P0023849 Cdc42bpa protein_coding protein_coding MGP_129S1SvImJ_T0023850.1 MGP_129S1SvImJ_G0016865.1 mouse_genomes_project 1 186519172 186563706 + MGP_129S1SvImJ_P0023850 Cdc42bpa protein_coding protein_coding MGP_129S1SvImJ_T0023851.1 MGP_129S1SvImJ_G0016865.1 mouse_genomes_project 1 186521246 186548225 + MGP_129S1SvImJ_P0023851 Cdc42bpa protein_coding protein_coding MGP_129S1SvImJ_T0023852.1 MGP_129S1SvImJ_G0016865.1 mouse_genomes_project 1 186521264 186526215 + Cdc42bpa protein_coding retained_intron MGP_129S1SvImJ_T0023853.1 MGP_129S1SvImJ_G0016865.1 mouse_genomes_project 1 186534212 186550053 + Cdc42bpa protein_coding processed_transcript MGP_129S1SvImJ_T0023854.1 MGP_129S1SvImJ_G0016865.1 mouse_genomes_project 1 186575575 186576863 + Cdc42bpa protein_coding retained_intron MGP_129S1SvImJ_T0020492.1 MGP_129S1SvImJ_G0016147.1 mouse_genomes_project 1 74876191 74892034 - MGP_129S1SvImJ_P0020492 Tmbim1 protein_coding protein_coding MGP_129S1SvImJ_T0020493.1 MGP_129S1SvImJ_G0016147.1 mouse_genomes_project 1 74876196 74891980 - Tmbim1 protein_coding retained_intron MGP_129S1SvImJ_T0020494.1 MGP_129S1SvImJ_G0016147.1 mouse_genomes_project 1 74876196 74883594 - Tmbim1 protein_coding retained_intron MGP_129S1SvImJ_T0020495.1 MGP_129S1SvImJ_G0016147.1 mouse_genomes_project 1 74876198 74891990 - MGP_129S1SvImJ_P0020495 Tmbim1 protein_coding protein_coding MGP_129S1SvImJ_T0020496.1 MGP_129S1SvImJ_G0016147.1 mouse_genomes_project 1 74877231 74879156 - MGP_129S1SvImJ_P0020496 Tmbim1 protein_coding protein_coding MGP_129S1SvImJ_T0020497.1 MGP_129S1SvImJ_G0016147.1 mouse_genomes_project 1 74881490 74891844 - Tmbim1 protein_coding processed_transcript MGP_129S1SvImJ_T0020498.1 MGP_129S1SvImJ_G0016147.1 mouse_genomes_project 1 74881838 74893251 - MGP_129S1SvImJ_P0020498 Tmbim1 protein_coding protein_coding MGP_129S1SvImJ_T0020499.1 MGP_129S1SvImJ_G0016147.1 mouse_genomes_project 1 74881855 74891749 - MGP_129S1SvImJ_P0020499 Tmbim1 protein_coding protein_coding MGP_129S1SvImJ_T0000596.1 MGP_129S1SvImJ_G0000535.1 mouse_genomes_project 1 97362168 97363923 - TEC TEC MGP_129S1SvImJ_T0002929.1 MGP_129S1SvImJ_G0002760.1 mouse_genomes_project 1 155279230 155333224 + antisense antisense MGP_129S1SvImJ_T0002930.1 MGP_129S1SvImJ_G0002760.1 mouse_genomes_project 1 155279263 155450367 + antisense antisense MGP_129S1SvImJ_T0019297.1 MGP_129S1SvImJ_G0015920.1 mouse_genomes_project 1 34830416 34841902 + MGP_129S1SvImJ_P0019297 Arid5a protein_coding protein_coding MGP_129S1SvImJ_T0019298.1 MGP_129S1SvImJ_G0015920.1 mouse_genomes_project 1 34830437 34840987 + Arid5a protein_coding retained_intron MGP_129S1SvImJ_T0019299.1 MGP_129S1SvImJ_G0015920.1 mouse_genomes_project 1 34830437 34842586 + Arid5a protein_coding retained_intron MGP_129S1SvImJ_T0019300.1 MGP_129S1SvImJ_G0015920.1 mouse_genomes_project 1 34830437 34841913 + Arid5a protein_coding processed_transcript MGP_129S1SvImJ_T0019301.1 MGP_129S1SvImJ_G0015920.1 mouse_genomes_project 1 34830437 34843227 + MGP_129S1SvImJ_P0019301 Arid5a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019302.1 MGP_129S1SvImJ_G0015920.1 mouse_genomes_project 1 34830437 34840141 + MGP_129S1SvImJ_P0019302 Arid5a protein_coding protein_coding MGP_129S1SvImJ_T0019303.1 MGP_129S1SvImJ_G0015920.1 mouse_genomes_project 1 34830437 34843770 + MGP_129S1SvImJ_P0019303 Arid5a protein_coding protein_coding MGP_129S1SvImJ_T0019304.1 MGP_129S1SvImJ_G0015920.1 mouse_genomes_project 1 34830437 34846728 + MGP_129S1SvImJ_P0019304 Arid5a protein_coding protein_coding MGP_129S1SvImJ_T0019305.1 MGP_129S1SvImJ_G0015920.1 mouse_genomes_project 1 34830437 34843225 + MGP_129S1SvImJ_P0019305 Arid5a protein_coding protein_coding MGP_129S1SvImJ_T0019306.1 MGP_129S1SvImJ_G0015920.1 mouse_genomes_project 1 34830441 34835474 + Arid5a protein_coding retained_intron MGP_129S1SvImJ_T0019307.1 MGP_129S1SvImJ_G0015920.1 mouse_genomes_project 1 34830462 34839277 + Arid5a protein_coding retained_intron MGP_129S1SvImJ_T0019308.1 MGP_129S1SvImJ_G0015920.1 mouse_genomes_project 1 34830516 34842902 + MGP_129S1SvImJ_P0019308 Arid5a protein_coding protein_coding MGP_129S1SvImJ_T0019309.1 MGP_129S1SvImJ_G0015920.1 mouse_genomes_project 1 34838690 34840835 + Arid5a protein_coding retained_intron MGP_129S1SvImJ_T0019310.1 MGP_129S1SvImJ_G0015920.1 mouse_genomes_project 1 34839725 34840831 + Arid5a protein_coding retained_intron MGP_129S1SvImJ_T0099092.1 MGP_129S1SvImJ_G0037159.1 mouse_genomes_project 1 71003162 71003269 + Gm23422 snRNA snRNA MGP_129S1SvImJ_T0009500.1 MGP_129S1SvImJ_G0007616.1 mouse_genomes_project 1 53506702 53506774 + Mir7681 miRNA miRNA MGP_129S1SvImJ_T0000726.1 MGP_129S1SvImJ_G0000663.1 mouse_genomes_project 1 163019880 163237956 + TEC TEC MGP_129S1SvImJ_T0019834.1 MGP_129S1SvImJ_G0016022.1 mouse_genomes_project 1 53410343 53440005 - MGP_129S1SvImJ_P0019834 Stk17b protein_coding protein_coding MGP_129S1SvImJ_T0019835.1 MGP_129S1SvImJ_G0016022.1 mouse_genomes_project 1 53415429 53417550 - Stk17b protein_coding retained_intron MGP_129S1SvImJ_T0002982.1 MGP_129S1SvImJ_G0002802.1 mouse_genomes_project 1 184606711 184609775 - antisense antisense MGP_129S1SvImJ_T0009507.1 MGP_129S1SvImJ_G0007623.1 mouse_genomes_project 1 64217505 64217569 - Mir6899 miRNA miRNA MGP_129S1SvImJ_T0005867.1 MGP_129S1SvImJ_G0004924.1 mouse_genomes_project 1 97700230 97734323 - 1700063A18Rik lincRNA lincRNA MGP_129S1SvImJ_T0011900.1 MGP_129S1SvImJ_G0009989.1 mouse_genomes_project 1 6646750 6647386 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100364.1 MGP_129S1SvImJ_G0038431.1 mouse_genomes_project 1 114893369 114893505 + Gm22331 snoRNA snoRNA MGP_129S1SvImJ_T0023682.1 MGP_129S1SvImJ_G0016827.1 mouse_genomes_project 1 180227115 180308003 + MGP_129S1SvImJ_P0023682 Spta1 protein_coding protein_coding MGP_129S1SvImJ_T0023683.1 MGP_129S1SvImJ_G0016827.1 mouse_genomes_project 1 180275508 180307111 + Spta1 protein_coding retained_intron MGP_129S1SvImJ_T0019384.1 MGP_129S1SvImJ_G0015934.1 mouse_genomes_project 1 35608234 35663099 + MGP_129S1SvImJ_P0019384 Vwa3b protein_coding protein_coding MGP_129S1SvImJ_T0019385.1 MGP_129S1SvImJ_G0015934.1 mouse_genomes_project 1 35610940 35646816 + MGP_129S1SvImJ_P0019385 Vwa3b protein_coding non_stop_decay MGP_129S1SvImJ_T0019386.1 MGP_129S1SvImJ_G0015934.1 mouse_genomes_project 1 35610952 35663098 + MGP_129S1SvImJ_P0019386 Vwa3b protein_coding protein_coding MGP_129S1SvImJ_T0019387.1 MGP_129S1SvImJ_G0015934.1 mouse_genomes_project 1 35611020 35662828 + MGP_129S1SvImJ_P0019387 Vwa3b protein_coding protein_coding MGP_129S1SvImJ_T0019388.1 MGP_129S1SvImJ_G0015934.1 mouse_genomes_project 1 35617946 35788423 + MGP_129S1SvImJ_P0019388 Vwa3b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019389.1 MGP_129S1SvImJ_G0015934.1 mouse_genomes_project 1 35617992 35789427 + MGP_129S1SvImJ_P0019389 Vwa3b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0019390.1 MGP_129S1SvImJ_G0015934.1 mouse_genomes_project 1 35692382 35700925 + Vwa3b protein_coding retained_intron MGP_129S1SvImJ_T0019391.1 MGP_129S1SvImJ_G0015934.1 mouse_genomes_project 1 35692519 35720636 + Vwa3b protein_coding processed_transcript MGP_129S1SvImJ_T0019392.1 MGP_129S1SvImJ_G0015934.1 mouse_genomes_project 1 35728325 35734156 + MGP_129S1SvImJ_P0019392 Vwa3b protein_coding protein_coding MGP_129S1SvImJ_T0019393.1 MGP_129S1SvImJ_G0015934.1 mouse_genomes_project 1 35750323 35789419 + MGP_129S1SvImJ_P0019393 Vwa3b protein_coding protein_coding MGP_129S1SvImJ_T0019394.1 MGP_129S1SvImJ_G0015934.1 mouse_genomes_project 1 35788668 35789427 + Vwa3b protein_coding retained_intron MGP_129S1SvImJ_T0021346.1 MGP_129S1SvImJ_G0016312.1 mouse_genomes_project 1 93079231 93085597 + Asb1 protein_coding processed_transcript MGP_129S1SvImJ_T0021347.1 MGP_129S1SvImJ_G0016312.1 mouse_genomes_project 1 93079396 93094781 + MGP_129S1SvImJ_P0021347 Asb1 protein_coding protein_coding MGP_129S1SvImJ_T0021348.1 MGP_129S1SvImJ_G0016312.1 mouse_genomes_project 1 93079396 93094781 + MGP_129S1SvImJ_P0021348 Asb1 protein_coding protein_coding MGP_129S1SvImJ_T0021349.1 MGP_129S1SvImJ_G0016312.1 mouse_genomes_project 1 93079477 93099777 + MGP_129S1SvImJ_P0021349 Asb1 protein_coding protein_coding MGP_129S1SvImJ_T0021350.1 MGP_129S1SvImJ_G0016312.1 mouse_genomes_project 1 93079744 93091421 + MGP_129S1SvImJ_P0021350 Asb1 protein_coding protein_coding MGP_129S1SvImJ_T0021351.1 MGP_129S1SvImJ_G0016312.1 mouse_genomes_project 1 93079744 93095074 + MGP_129S1SvImJ_P0021351 Asb1 protein_coding protein_coding MGP_129S1SvImJ_T0020367.1 MGP_129S1SvImJ_G0016120.1 mouse_genomes_project 1 68315361 69456370 - MGP_129S1SvImJ_P0020367 Erbb4 protein_coding protein_coding MGP_129S1SvImJ_T0020368.1 MGP_129S1SvImJ_G0016120.1 mouse_genomes_project 1 68315361 69456673 - MGP_129S1SvImJ_P0020368 Erbb4 protein_coding protein_coding MGP_129S1SvImJ_T0020369.1 MGP_129S1SvImJ_G0016120.1 mouse_genomes_project 1 68323224 69055799 - MGP_129S1SvImJ_P0020369 Erbb4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0020370.1 MGP_129S1SvImJ_G0016120.1 mouse_genomes_project 1 68323224 69056391 - MGP_129S1SvImJ_P0020370 Erbb4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0020371.1 MGP_129S1SvImJ_G0016120.1 mouse_genomes_project 1 68548840 69456370 - MGP_129S1SvImJ_P0020371 Erbb4 protein_coding protein_coding MGP_129S1SvImJ_T0020372.1 MGP_129S1SvImJ_G0016120.1 mouse_genomes_project 1 68585264 68593483 - Erbb4 protein_coding processed_transcript MGP_129S1SvImJ_T0020373.1 MGP_129S1SvImJ_G0016120.1 mouse_genomes_project 1 68593314 68628954 - Erbb4 protein_coding retained_intron MGP_129S1SvImJ_T0011267.1 MGP_129S1SvImJ_G0009383.1 mouse_genomes_project 1 59600734 59600819 + Gm24545 misc_RNA misc_RNA MGP_129S1SvImJ_T0023934.1 MGP_129S1SvImJ_G0016882.1 mouse_genomes_project 1 187581238 187643896 - MGP_129S1SvImJ_P0023934 Nvl protein_coding protein_coding MGP_129S1SvImJ_T0023935.1 MGP_129S1SvImJ_G0016882.1 mouse_genomes_project 1 187585742 187587859 - Nvl protein_coding processed_transcript MGP_129S1SvImJ_T0023936.1 MGP_129S1SvImJ_G0016882.1 mouse_genomes_project 1 187587349 187589616 - Nvl protein_coding retained_intron MGP_129S1SvImJ_T0023937.1 MGP_129S1SvImJ_G0016882.1 mouse_genomes_project 1 187590072 187600148 - Nvl protein_coding retained_intron MGP_129S1SvImJ_T0023938.1 MGP_129S1SvImJ_G0016882.1 mouse_genomes_project 1 187635888 187638374 - Nvl protein_coding retained_intron MGP_129S1SvImJ_T0020423.1 MGP_129S1SvImJ_G0016128.1 mouse_genomes_project 1 72636371 72698967 - MGP_129S1SvImJ_P0020423 Mreg protein_coding protein_coding MGP_129S1SvImJ_T0000424.1 MGP_129S1SvImJ_G0000366.1 mouse_genomes_project 1 19151559 19153886 - TEC TEC MGP_129S1SvImJ_T0019672.1 MGP_129S1SvImJ_G0015992.1 mouse_genomes_project 1 44333128 44355534 + Col3a1 protein_coding retained_intron MGP_129S1SvImJ_T0019673.1 MGP_129S1SvImJ_G0015992.1 mouse_genomes_project 1 44333128 44385724 + MGP_129S1SvImJ_P0019673 Col3a1 protein_coding protein_coding MGP_129S1SvImJ_T0019674.1 MGP_129S1SvImJ_G0015992.1 mouse_genomes_project 1 44333237 44338582 + Col3a1 protein_coding processed_transcript MGP_129S1SvImJ_T0019675.1 MGP_129S1SvImJ_G0015992.1 mouse_genomes_project 1 44358104 44359410 + Col3a1 protein_coding retained_intron MGP_129S1SvImJ_T0019676.1 MGP_129S1SvImJ_G0015992.1 mouse_genomes_project 1 44364637 44367735 + Col3a1 protein_coding retained_intron MGP_129S1SvImJ_T0019677.1 MGP_129S1SvImJ_G0015992.1 mouse_genomes_project 1 44366203 44372404 + MGP_129S1SvImJ_P0019677 Col3a1 protein_coding protein_coding MGP_129S1SvImJ_T0019678.1 MGP_129S1SvImJ_G0015992.1 mouse_genomes_project 1 44371685 44383785 + MGP_129S1SvImJ_P0019678 Col3a1 protein_coding protein_coding MGP_129S1SvImJ_T0100373.1 MGP_129S1SvImJ_G0038440.1 mouse_genomes_project 1 138175985 138176111 + Gm25612 snoRNA snoRNA MGP_129S1SvImJ_T0002859.1 MGP_129S1SvImJ_G0002705.1 mouse_genomes_project 1 75934222 75942860 - Gm15179 antisense antisense MGP_129S1SvImJ_T0002860.1 MGP_129S1SvImJ_G0002705.1 mouse_genomes_project 1 75934282 75936465 - Gm15179 antisense antisense MGP_129S1SvImJ_T0002810.1 MGP_129S1SvImJ_G0002670.1 mouse_genomes_project 1 38407343 38414536 + D930019O06Rik antisense antisense MGP_129S1SvImJ_T0012066.1 MGP_129S1SvImJ_G0010155.1 mouse_genomes_project 1 59103903 59105286 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005911.1 MGP_129S1SvImJ_G0004957.1 mouse_genomes_project 1 125096655 125147621 + Gm28590 lincRNA lincRNA MGP_129S1SvImJ_T0012288.1 MGP_129S1SvImJ_G0010377.1 mouse_genomes_project 1 152543067 152543531 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020613.1 MGP_129S1SvImJ_G0016170.1 mouse_genomes_project 1 75684124 75692474 - MGP_129S1SvImJ_P0020613 Slc23a3 protein_coding protein_coding MGP_129S1SvImJ_T0020614.1 MGP_129S1SvImJ_G0016170.1 mouse_genomes_project 1 75690296 75692130 - Slc23a3 protein_coding retained_intron MGP_129S1SvImJ_T0002820.1 MGP_129S1SvImJ_G0002678.1 mouse_genomes_project 1 43764221 43769491 - 4930521E06Rik antisense antisense MGP_129S1SvImJ_T0011808.1 MGP_129S1SvImJ_G0009924.1 mouse_genomes_project 1 109780012 109804234 + MGP_129S1SvImJ_P0011808 polymorphic_pseudogene protein_coding MGP_129S1SvImJ_T0011809.1 MGP_129S1SvImJ_G0009924.1 mouse_genomes_project 1 109780036 109806283 + polymorphic_pseudogene processed_transcript MGP_129S1SvImJ_T0011810.1 MGP_129S1SvImJ_G0009924.1 mouse_genomes_project 1 109783831 109804084 + MGP_129S1SvImJ_P0011810 polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0000466.1 MGP_129S1SvImJ_G0000405.1 mouse_genomes_project 1 32409530 32412269 + TEC TEC MGP_129S1SvImJ_T0023706.1 MGP_129S1SvImJ_G0016836.1 mouse_genomes_project 1 181697934 181725737 - MGP_129S1SvImJ_P0023706 Fh1 protein_coding protein_coding MGP_129S1SvImJ_T0023707.1 MGP_129S1SvImJ_G0016836.1 mouse_genomes_project 1 181698936 181701842 - Fh1 protein_coding retained_intron MGP_129S1SvImJ_T0023708.1 MGP_129S1SvImJ_G0016836.1 mouse_genomes_project 1 181698938 181704204 - Fh1 protein_coding retained_intron MGP_129S1SvImJ_T0023709.1 MGP_129S1SvImJ_G0016836.1 mouse_genomes_project 1 181698944 181707271 - MGP_129S1SvImJ_P0023709 Fh1 protein_coding protein_coding MGP_129S1SvImJ_T0023710.1 MGP_129S1SvImJ_G0016836.1 mouse_genomes_project 1 181714733 181725675 - MGP_129S1SvImJ_P0023710 Fh1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0102075.1 MGP_129S1SvImJ_G0039910.1 mouse_genomes_project 1 106696253 106697613 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0000538.1 MGP_129S1SvImJ_G0000477.1 mouse_genomes_project 1 70141528 70143414 + TEC TEC MGP_129S1SvImJ_T0005893.1 MGP_129S1SvImJ_G0004945.1 mouse_genomes_project 1 122062592 122071944 + Gm29455 lincRNA lincRNA MGP_129S1SvImJ_T0005894.1 MGP_129S1SvImJ_G0004945.1 mouse_genomes_project 1 122062634 122118877 + Gm29455 lincRNA lincRNA MGP_129S1SvImJ_T0023681.1 MGP_129S1SvImJ_G0016826.1 mouse_genomes_project 1 180210701 180211747 + MGP_129S1SvImJ_P0023681 Olfr420 protein_coding protein_coding MGP_129S1SvImJ_T0102056.1 MGP_129S1SvImJ_G0039891.1 mouse_genomes_project 1 70445761 70445849 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0019466.1 MGP_129S1SvImJ_G0015948.1 mouse_genomes_project 1 36656155 36718050 + MGP_129S1SvImJ_P0019466 Eif5b protein_coding protein_coding MGP_129S1SvImJ_T0019467.1 MGP_129S1SvImJ_G0015948.1 mouse_genomes_project 1 36656274 36714492 + Eif5b protein_coding retained_intron MGP_129S1SvImJ_T0019468.1 MGP_129S1SvImJ_G0015948.1 mouse_genomes_project 1 36702188 36705855 + Eif5b protein_coding retained_intron MGP_129S1SvImJ_T0019469.1 MGP_129S1SvImJ_G0015948.1 mouse_genomes_project 1 36703263 36707091 + Eif5b protein_coding processed_transcript MGP_129S1SvImJ_T0019470.1 MGP_129S1SvImJ_G0015948.1 mouse_genomes_project 1 36705049 36709218 + Eif5b protein_coding retained_intron MGP_129S1SvImJ_T0005770.1 MGP_129S1SvImJ_G0004846.1 mouse_genomes_project 1 61465462 61482660 + 9530026F06Rik lincRNA lincRNA MGP_129S1SvImJ_T0019960.1 MGP_129S1SvImJ_G0016047.1 mouse_genomes_project 1 58052132 58117238 + MGP_129S1SvImJ_P0019960 protein_coding protein_coding MGP_129S1SvImJ_T0019961.1 MGP_129S1SvImJ_G0016047.1 mouse_genomes_project 1 58052167 58108949 + protein_coding processed_transcript MGP_129S1SvImJ_T0019962.1 MGP_129S1SvImJ_G0016047.1 mouse_genomes_project 1 58052186 58057162 + protein_coding processed_transcript MGP_129S1SvImJ_T0019963.1 MGP_129S1SvImJ_G0016047.1 mouse_genomes_project 1 58052954 58055112 + protein_coding retained_intron MGP_129S1SvImJ_T0019964.1 MGP_129S1SvImJ_G0016047.1 mouse_genomes_project 1 58082189 58088370 + protein_coding retained_intron MGP_129S1SvImJ_T0023765.1 MGP_129S1SvImJ_G0016847.1 mouse_genomes_project 1 183176435 183409343 - MGP_129S1SvImJ_P0023765 Akt3 protein_coding protein_coding MGP_129S1SvImJ_T0023766.1 MGP_129S1SvImJ_G0016847.1 mouse_genomes_project 1 183178477 183409314 - MGP_129S1SvImJ_P0023766 Akt3 protein_coding protein_coding MGP_129S1SvImJ_T0023767.1 MGP_129S1SvImJ_G0016847.1 mouse_genomes_project 1 183178478 183423409 - MGP_129S1SvImJ_P0023767 Akt3 protein_coding protein_coding MGP_129S1SvImJ_T0023645.1 MGP_129S1SvImJ_G0016806.1 mouse_genomes_project 1 179198066 179204884 - MGP_129S1SvImJ_P0023645 protein_coding protein_coding MGP_129S1SvImJ_T0022090.1 MGP_129S1SvImJ_G0016476.1 mouse_genomes_project 1 136065320 136241447 - MGP_129S1SvImJ_P0022090 Nfasc protein_coding protein_coding MGP_129S1SvImJ_T0022091.1 MGP_129S1SvImJ_G0016476.1 mouse_genomes_project 1 136065406 136179191 - MGP_129S1SvImJ_P0022091 Nfasc protein_coding protein_coding MGP_129S1SvImJ_T0022092.1 MGP_129S1SvImJ_G0016476.1 mouse_genomes_project 1 136065409 136136900 - MGP_129S1SvImJ_P0022092 Nfasc protein_coding protein_coding MGP_129S1SvImJ_T0022093.1 MGP_129S1SvImJ_G0016476.1 mouse_genomes_project 1 136071309 136083197 - Nfasc protein_coding processed_transcript MGP_129S1SvImJ_T0022094.1 MGP_129S1SvImJ_G0016476.1 mouse_genomes_project 1 136095885 136241481 - MGP_129S1SvImJ_P0022094 Nfasc protein_coding protein_coding MGP_129S1SvImJ_T0022095.1 MGP_129S1SvImJ_G0016476.1 mouse_genomes_project 1 136097671 136101203 - Nfasc protein_coding retained_intron MGP_129S1SvImJ_T0022096.1 MGP_129S1SvImJ_G0016476.1 mouse_genomes_project 1 136115777 136122541 - Nfasc protein_coding retained_intron MGP_129S1SvImJ_T0022097.1 MGP_129S1SvImJ_G0016476.1 mouse_genomes_project 1 136164701 136241462 - Nfasc protein_coding processed_transcript MGP_129S1SvImJ_T0005949.1 MGP_129S1SvImJ_G0004989.1 mouse_genomes_project 1 143440191 143462747 + 4933436E23Rik lincRNA lincRNA MGP_129S1SvImJ_T0098792.1 MGP_129S1SvImJ_G0036876.1 mouse_genomes_project 1 157442875 157447882 - Gm15479 sense_intronic sense_intronic MGP_129S1SvImJ_T0005953.1 MGP_129S1SvImJ_G0004993.1 mouse_genomes_project 1 154037053 154076534 - Gm29398 lincRNA lincRNA MGP_129S1SvImJ_T0005954.1 MGP_129S1SvImJ_G0004993.1 mouse_genomes_project 1 154047520 154076533 - Gm29398 lincRNA lincRNA MGP_129S1SvImJ_T0023640.1 MGP_129S1SvImJ_G0016802.1 mouse_genomes_project 1 179129311 179130345 + MGP_129S1SvImJ_P0023640 Olfr1404 protein_coding protein_coding MGP_129S1SvImJ_T0002768.1 MGP_129S1SvImJ_G0002641.1 mouse_genomes_project 1 6987324 7037182 + 1700034P13Rik antisense antisense MGP_129S1SvImJ_T0002769.1 MGP_129S1SvImJ_G0002641.1 mouse_genomes_project 1 6987632 7036015 + 1700034P13Rik antisense antisense MGP_129S1SvImJ_T0002770.1 MGP_129S1SvImJ_G0002641.1 mouse_genomes_project 1 6988157 7015472 + 1700034P13Rik antisense antisense MGP_129S1SvImJ_T0002771.1 MGP_129S1SvImJ_G0002641.1 mouse_genomes_project 1 6988263 7015311 + 1700034P13Rik antisense antisense MGP_129S1SvImJ_T0002772.1 MGP_129S1SvImJ_G0002641.1 mouse_genomes_project 1 7028194 7035862 + 1700034P13Rik antisense antisense MGP_129S1SvImJ_T0020473.1 MGP_129S1SvImJ_G0016142.1 mouse_genomes_project 1 74775042 74777887 - MGP_129S1SvImJ_P0020473 Cxcr1 protein_coding protein_coding MGP_129S1SvImJ_T0020474.1 MGP_129S1SvImJ_G0016142.1 mouse_genomes_project 1 74775042 74776493 - MGP_129S1SvImJ_P0020474 Cxcr1 protein_coding protein_coding MGP_129S1SvImJ_T0022451.1 MGP_129S1SvImJ_G0016551.1 mouse_genomes_project 1 143248884 143437894 - MGP_129S1SvImJ_P0022451 Crb1 protein_coding protein_coding MGP_129S1SvImJ_T0022452.1 MGP_129S1SvImJ_G0016551.1 mouse_genomes_project 1 143250074 143254103 - Crb1 protein_coding retained_intron MGP_129S1SvImJ_T0022453.1 MGP_129S1SvImJ_G0016551.1 mouse_genomes_project 1 143283390 143437917 - MGP_129S1SvImJ_P0022453 Crb1 protein_coding protein_coding MGP_129S1SvImJ_T0022454.1 MGP_129S1SvImJ_G0016551.1 mouse_genomes_project 1 143299479 143310904 - Crb1 protein_coding retained_intron MGP_129S1SvImJ_T0022455.1 MGP_129S1SvImJ_G0016551.1 mouse_genomes_project 1 143301526 143437858 - MGP_129S1SvImJ_P0022455 Crb1 protein_coding protein_coding MGP_129S1SvImJ_T0022456.1 MGP_129S1SvImJ_G0016551.1 mouse_genomes_project 1 143302588 143387796 - MGP_129S1SvImJ_P0022456 Crb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022457.1 MGP_129S1SvImJ_G0016551.1 mouse_genomes_project 1 143302603 143387816 - MGP_129S1SvImJ_P0022457 Crb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021634.1 MGP_129S1SvImJ_G0016375.1 mouse_genomes_project 1 109126078 109148694 + MGP_129S1SvImJ_P0021634 Serpinb12 protein_coding protein_coding MGP_129S1SvImJ_T0021635.1 MGP_129S1SvImJ_G0016375.1 mouse_genomes_project 1 109130567 109148694 + MGP_129S1SvImJ_P0021635 Serpinb12 protein_coding protein_coding MGP_129S1SvImJ_T0021636.1 MGP_129S1SvImJ_G0016375.1 mouse_genomes_project 1 109130569 109142072 + Serpinb12 protein_coding retained_intron MGP_129S1SvImJ_T0020936.1 MGP_129S1SvImJ_G0016222.1 mouse_genomes_project 1 84020941 84021933 + MGP_129S1SvImJ_P0020936 Krtap28-13 protein_coding protein_coding MGP_129S1SvImJ_T0000536.1 MGP_129S1SvImJ_G0000475.1 mouse_genomes_project 1 69018431 69020804 - TEC TEC MGP_129S1SvImJ_T0006081.1 MGP_129S1SvImJ_G0005092.1 mouse_genomes_project 1 201353434 201364007 - 4930503O07Rik lincRNA lincRNA MGP_129S1SvImJ_T0019752.1 MGP_129S1SvImJ_G0016007.1 mouse_genomes_project 1 51673366 51743082 - MGP_129S1SvImJ_P0019752 Gls protein_coding protein_coding MGP_129S1SvImJ_T0019753.1 MGP_129S1SvImJ_G0016007.1 mouse_genomes_project 1 51675859 51742155 - MGP_129S1SvImJ_P0019753 Gls protein_coding protein_coding MGP_129S1SvImJ_T0019754.1 MGP_129S1SvImJ_G0016007.1 mouse_genomes_project 1 51676046 51700820 - MGP_129S1SvImJ_P0019754 Gls protein_coding protein_coding MGP_129S1SvImJ_T0019755.1 MGP_129S1SvImJ_G0016007.1 mouse_genomes_project 1 51676182 51678894 - Gls protein_coding retained_intron MGP_129S1SvImJ_T0019756.1 MGP_129S1SvImJ_G0016007.1 mouse_genomes_project 1 51676200 51679064 - Gls protein_coding retained_intron MGP_129S1SvImJ_T0019757.1 MGP_129S1SvImJ_G0016007.1 mouse_genomes_project 1 51678365 51700821 - Gls protein_coding retained_intron MGP_129S1SvImJ_T0019758.1 MGP_129S1SvImJ_G0016007.1 mouse_genomes_project 1 51694013 51743091 - MGP_129S1SvImJ_P0019758 Gls protein_coding protein_coding MGP_129S1SvImJ_T0019759.1 MGP_129S1SvImJ_G0016007.1 mouse_genomes_project 1 51695191 51710345 - Gls protein_coding retained_intron MGP_129S1SvImJ_T0019760.1 MGP_129S1SvImJ_G0016007.1 mouse_genomes_project 1 51695191 51722072 - MGP_129S1SvImJ_P0019760 Gls protein_coding protein_coding MGP_129S1SvImJ_T0019761.1 MGP_129S1SvImJ_G0016007.1 mouse_genomes_project 1 51697594 51700820 - MGP_129S1SvImJ_P0019761 Gls protein_coding protein_coding MGP_129S1SvImJ_T0019762.1 MGP_129S1SvImJ_G0016007.1 mouse_genomes_project 1 51699378 51707285 - Gls protein_coding retained_intron MGP_129S1SvImJ_T0019763.1 MGP_129S1SvImJ_G0016007.1 mouse_genomes_project 1 51701110 51725457 - Gls protein_coding processed_transcript MGP_129S1SvImJ_T0019764.1 MGP_129S1SvImJ_G0016007.1 mouse_genomes_project 1 51706388 51710237 - Gls protein_coding retained_intron MGP_129S1SvImJ_T0019765.1 MGP_129S1SvImJ_G0016007.1 mouse_genomes_project 1 51714032 51725457 - Gls protein_coding retained_intron MGP_129S1SvImJ_T0019766.1 MGP_129S1SvImJ_G0016007.1 mouse_genomes_project 1 51715043 51724396 - Gls protein_coding retained_intron MGP_129S1SvImJ_T0019767.1 MGP_129S1SvImJ_G0016007.1 mouse_genomes_project 1 51717163 51725806 - Gls protein_coding retained_intron MGP_129S1SvImJ_T0019768.1 MGP_129S1SvImJ_G0016007.1 mouse_genomes_project 1 51724380 51742670 - Gls protein_coding processed_transcript MGP_129S1SvImJ_T0019323.1 MGP_129S1SvImJ_G0015923.1 mouse_genomes_project 1 34949117 34968913 - MGP_129S1SvImJ_P0019323 Lman2l protein_coding protein_coding MGP_129S1SvImJ_T0019324.1 MGP_129S1SvImJ_G0015923.1 mouse_genomes_project 1 34951311 34974516 - MGP_129S1SvImJ_P0019324 Lman2l protein_coding protein_coding MGP_129S1SvImJ_T0019325.1 MGP_129S1SvImJ_G0015923.1 mouse_genomes_project 1 34952432 34971117 - Lman2l protein_coding retained_intron MGP_129S1SvImJ_T0019326.1 MGP_129S1SvImJ_G0015923.1 mouse_genomes_project 1 34952432 34974516 - MGP_129S1SvImJ_P0019326 Lman2l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019327.1 MGP_129S1SvImJ_G0015923.1 mouse_genomes_project 1 34952432 34974516 - MGP_129S1SvImJ_P0019327 Lman2l protein_coding protein_coding MGP_129S1SvImJ_T0019328.1 MGP_129S1SvImJ_G0015923.1 mouse_genomes_project 1 34953752 34957613 - MGP_129S1SvImJ_P0019328 Lman2l protein_coding protein_coding MGP_129S1SvImJ_T0019329.1 MGP_129S1SvImJ_G0015923.1 mouse_genomes_project 1 34957638 34974516 - MGP_129S1SvImJ_P0019329 Lman2l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019330.1 MGP_129S1SvImJ_G0015923.1 mouse_genomes_project 1 34972989 34974502 - Lman2l protein_coding retained_intron MGP_129S1SvImJ_T0011888.1 MGP_129S1SvImJ_G0009977.1 mouse_genomes_project 1 4272987 4274293 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005676.1 MGP_129S1SvImJ_G0004777.1 mouse_genomes_project 1 14701601 14706302 + Gm28784 lincRNA lincRNA MGP_129S1SvImJ_T0009545.1 MGP_129S1SvImJ_G0007661.1 mouse_genomes_project 1 138517359 138517443 + Gm22232 miRNA miRNA MGP_129S1SvImJ_T0102108.1 MGP_129S1SvImJ_G0039943.1 mouse_genomes_project 1 187561755 187570800 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0012355.1 MGP_129S1SvImJ_G0010444.1 mouse_genomes_project 1 182477887 182478404 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100337.1 MGP_129S1SvImJ_G0038404.1 mouse_genomes_project 1 59672601 59672685 + Gm26293 snoRNA snoRNA MGP_129S1SvImJ_T0002791.1 MGP_129S1SvImJ_G0002655.1 mouse_genomes_project 1 29362979 29377053 + Gm29128 antisense antisense MGP_129S1SvImJ_T0012280.1 MGP_129S1SvImJ_G0010369.1 mouse_genomes_project 1 147425584 147426854 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002917.1 MGP_129S1SvImJ_G0002749.1 mouse_genomes_project 1 138889520 138890432 + Gm15445 antisense antisense MGP_129S1SvImJ_T0020231.1 MGP_129S1SvImJ_G0016090.1 mouse_genomes_project 1 63786484 63856755 - MGP_129S1SvImJ_P0020231 Dytn protein_coding protein_coding MGP_129S1SvImJ_T0020232.1 MGP_129S1SvImJ_G0016090.1 mouse_genomes_project 1 63830715 63856738 - Dytn protein_coding retained_intron MGP_129S1SvImJ_T0019549.1 MGP_129S1SvImJ_G0015965.1 mouse_genomes_project 1 39009643 39103597 + MGP_129S1SvImJ_P0019549 Il1r1 protein_coding protein_coding MGP_129S1SvImJ_T0019550.1 MGP_129S1SvImJ_G0015965.1 mouse_genomes_project 1 39050660 39061180 + Il1r1 protein_coding processed_transcript MGP_129S1SvImJ_T0019551.1 MGP_129S1SvImJ_G0015965.1 mouse_genomes_project 1 39055708 39102511 + MGP_129S1SvImJ_P0019551 Il1r1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0012214.1 MGP_129S1SvImJ_G0010303.1 mouse_genomes_project 1 116040975 116041711 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005957.1 MGP_129S1SvImJ_G0004996.1 mouse_genomes_project 1 155823641 155827956 + C730036E19Rik lincRNA lincRNA MGP_129S1SvImJ_T0005961.1 MGP_129S1SvImJ_G0005000.1 mouse_genomes_project 1 158878060 158880882 - Gm29291 lincRNA lincRNA MGP_129S1SvImJ_T0005962.1 MGP_129S1SvImJ_G0005000.1 mouse_genomes_project 1 158878216 158880886 - Gm29291 lincRNA lincRNA MGP_129S1SvImJ_T0012388.1 MGP_129S1SvImJ_G0010477.1 mouse_genomes_project 1 198446567 198447149 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005959.1 MGP_129S1SvImJ_G0004998.1 mouse_genomes_project 1 158565312 158581913 - C230024C17Rik lincRNA lincRNA MGP_129S1SvImJ_T0011922.1 MGP_129S1SvImJ_G0010011.1 mouse_genomes_project 1 14294483 14296343 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009505.1 MGP_129S1SvImJ_G0007621.1 mouse_genomes_project 1 63341486 63341612 + Gm27512 miRNA miRNA MGP_129S1SvImJ_T0021202.1 MGP_129S1SvImJ_G0016275.1 mouse_genomes_project 1 89483439 89628384 + MGP_129S1SvImJ_P0021202 Ugt1a8 protein_coding protein_coding MGP_129S1SvImJ_T0006071.1 MGP_129S1SvImJ_G0005084.1 mouse_genomes_project 1 198161682 198163040 + Gm38161 lincRNA lincRNA MGP_129S1SvImJ_T0020395.1 MGP_129S1SvImJ_G0016125.1 mouse_genomes_project 1 71661875 71841824 - MGP_129S1SvImJ_P0020395 Abca12 protein_coding protein_coding MGP_129S1SvImJ_T0020396.1 MGP_129S1SvImJ_G0016125.1 mouse_genomes_project 1 71709940 71726986 - Abca12 protein_coding retained_intron MGP_129S1SvImJ_T0020397.1 MGP_129S1SvImJ_G0016125.1 mouse_genomes_project 1 71732271 71841824 - Abca12 protein_coding retained_intron MGP_129S1SvImJ_T0020398.1 MGP_129S1SvImJ_G0016125.1 mouse_genomes_project 1 71755290 71758459 - Abca12 protein_coding retained_intron MGP_129S1SvImJ_T0020399.1 MGP_129S1SvImJ_G0016125.1 mouse_genomes_project 1 71787045 71841810 - Abca12 protein_coding retained_intron MGP_129S1SvImJ_T0002799.1 MGP_129S1SvImJ_G0002662.1 mouse_genomes_project 1 35941360 35945850 - 4930439A04Rik antisense antisense MGP_129S1SvImJ_T0002800.1 MGP_129S1SvImJ_G0002662.1 mouse_genomes_project 1 35945232 35945866 - 4930439A04Rik antisense antisense MGP_129S1SvImJ_T0021992.1 MGP_129S1SvImJ_G0016455.1 mouse_genomes_project 1 135037793 135053750 + MGP_129S1SvImJ_P0021992 Avpr1b protein_coding protein_coding MGP_129S1SvImJ_T0021993.1 MGP_129S1SvImJ_G0016455.1 mouse_genomes_project 1 135038284 135051504 + MGP_129S1SvImJ_P0021993 Avpr1b protein_coding protein_coding MGP_129S1SvImJ_T0011881.1 MGP_129S1SvImJ_G0009970.1 mouse_genomes_project 1 3572239 3572878 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020838.1 MGP_129S1SvImJ_G0016201.1 mouse_genomes_project 1 79400332 79456188 + MGP_129S1SvImJ_P0020838 Acsl3 protein_coding protein_coding MGP_129S1SvImJ_T0020839.1 MGP_129S1SvImJ_G0016201.1 mouse_genomes_project 1 79400390 79455412 + MGP_129S1SvImJ_P0020839 Acsl3 protein_coding protein_coding MGP_129S1SvImJ_T0020842.1 MGP_129S1SvImJ_G0016201.1 mouse_genomes_project 1 79413917 79437202 + MGP_129S1SvImJ_P0020842 Acsl3 protein_coding protein_coding MGP_129S1SvImJ_T0020843.1 MGP_129S1SvImJ_G0016201.1 mouse_genomes_project 1 79429632 79456192 + MGP_129S1SvImJ_P0020843 Acsl3 protein_coding protein_coding MGP_129S1SvImJ_T0020844.1 MGP_129S1SvImJ_G0016201.1 mouse_genomes_project 1 79429906 79441169 + Acsl3 protein_coding retained_intron MGP_129S1SvImJ_T0020845.1 MGP_129S1SvImJ_G0016201.1 mouse_genomes_project 1 79439182 79445480 + Acsl3 protein_coding retained_intron MGP_129S1SvImJ_T0020846.1 MGP_129S1SvImJ_G0016201.1 mouse_genomes_project 1 79445106 79449734 + Acsl3 protein_coding retained_intron MGP_129S1SvImJ_T0021381.1 MGP_129S1SvImJ_G0016319.1 mouse_genomes_project 1 94157481 94159429 + MGP_129S1SvImJ_P0021381 Olfr1413 protein_coding protein_coding MGP_129S1SvImJ_T0023512.1 MGP_129S1SvImJ_G0016768.1 mouse_genomes_project 1 177465509 177479550 - MGP_129S1SvImJ_P0023512 Slamf7 protein_coding protein_coding MGP_129S1SvImJ_T0023513.1 MGP_129S1SvImJ_G0016768.1 mouse_genomes_project 1 177466303 177479630 - MGP_129S1SvImJ_P0023513 Slamf7 protein_coding protein_coding MGP_129S1SvImJ_T0023514.1 MGP_129S1SvImJ_G0016768.1 mouse_genomes_project 1 177466816 177479550 - MGP_129S1SvImJ_P0023514 Slamf7 protein_coding protein_coding MGP_129S1SvImJ_T0005714.1 MGP_129S1SvImJ_G0004810.1 mouse_genomes_project 1 40389835 40394218 - lincRNA lincRNA MGP_129S1SvImJ_T0003021.1 MGP_129S1SvImJ_G0002831.1 mouse_genomes_project 1 199922617 199923941 + Gm15867 antisense antisense MGP_129S1SvImJ_T0012349.1 MGP_129S1SvImJ_G0010438.1 mouse_genomes_project 1 177158883 177159219 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000567.1 MGP_129S1SvImJ_G0000506.1 mouse_genomes_project 1 85152787 85154431 - TEC TEC MGP_129S1SvImJ_T0100394.1 MGP_129S1SvImJ_G0038461.1 mouse_genomes_project 1 166289405 166289481 + Gm25789 snoRNA snoRNA MGP_129S1SvImJ_T0019869.1 MGP_129S1SvImJ_G0016028.1 mouse_genomes_project 1 54686910 54735981 - MGP_129S1SvImJ_P0019869 Sf3b1 protein_coding protein_coding MGP_129S1SvImJ_T0019870.1 MGP_129S1SvImJ_G0016028.1 mouse_genomes_project 1 54686914 54694995 - Sf3b1 protein_coding retained_intron MGP_129S1SvImJ_T0019871.1 MGP_129S1SvImJ_G0016028.1 mouse_genomes_project 1 54692832 54696421 - Sf3b1 protein_coding retained_intron MGP_129S1SvImJ_T0019872.1 MGP_129S1SvImJ_G0016028.1 mouse_genomes_project 1 54709374 54735964 - Sf3b1 protein_coding retained_intron MGP_129S1SvImJ_T0019873.1 MGP_129S1SvImJ_G0016028.1 mouse_genomes_project 1 54713889 54722652 - Sf3b1 protein_coding retained_intron MGP_129S1SvImJ_T0019874.1 MGP_129S1SvImJ_G0016028.1 mouse_genomes_project 1 54719710 54735894 - MGP_129S1SvImJ_P0019874 Sf3b1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019875.1 MGP_129S1SvImJ_G0016028.1 mouse_genomes_project 1 54723259 54735873 - Sf3b1 protein_coding processed_transcript MGP_129S1SvImJ_T0019876.1 MGP_129S1SvImJ_G0016028.1 mouse_genomes_project 1 54723389 54724388 - Sf3b1 protein_coding retained_intron MGP_129S1SvImJ_T0005710.1 MGP_129S1SvImJ_G0004808.1 mouse_genomes_project 1 38603455 38610236 - 1700066B17Rik lincRNA lincRNA MGP_129S1SvImJ_T0005711.1 MGP_129S1SvImJ_G0004808.1 mouse_genomes_project 1 38606716 38611852 - 1700066B17Rik lincRNA lincRNA MGP_129S1SvImJ_T0005712.1 MGP_129S1SvImJ_G0004808.1 mouse_genomes_project 1 38606721 38611856 - 1700066B17Rik lincRNA lincRNA MGP_129S1SvImJ_T0005802.1 MGP_129S1SvImJ_G0004870.1 mouse_genomes_project 1 73829323 73863535 + Gm29185 lincRNA lincRNA MGP_129S1SvImJ_T0005785.1 MGP_129S1SvImJ_G0004858.1 mouse_genomes_project 1 64827934 64830754 + Gm29152 lincRNA lincRNA MGP_129S1SvImJ_T0024226.1 MGP_129S1SvImJ_G0016941.1 mouse_genomes_project 1 198197560 198211856 - MGP_129S1SvImJ_P0024226 Atf3 protein_coding protein_coding MGP_129S1SvImJ_T0024227.1 MGP_129S1SvImJ_G0016941.1 mouse_genomes_project 1 198197560 198247965 - MGP_129S1SvImJ_P0024227 Atf3 protein_coding protein_coding MGP_129S1SvImJ_T0024228.1 MGP_129S1SvImJ_G0016941.1 mouse_genomes_project 1 198198689 198211624 - Atf3 protein_coding processed_transcript MGP_129S1SvImJ_T0022570.1 MGP_129S1SvImJ_G0016577.1 mouse_genomes_project 1 155097238 155113720 - MGP_129S1SvImJ_P0022570 protein_coding protein_coding MGP_129S1SvImJ_T0022571.1 MGP_129S1SvImJ_G0016577.1 mouse_genomes_project 1 155097238 155113720 - MGP_129S1SvImJ_P0022571 protein_coding protein_coding MGP_129S1SvImJ_T0022572.1 MGP_129S1SvImJ_G0016577.1 mouse_genomes_project 1 155097238 155113720 - MGP_129S1SvImJ_P0022572 protein_coding protein_coding MGP_129S1SvImJ_T0022573.1 MGP_129S1SvImJ_G0016577.1 mouse_genomes_project 1 155097642 155114287 - MGP_129S1SvImJ_P0022573 protein_coding protein_coding MGP_129S1SvImJ_T0022574.1 MGP_129S1SvImJ_G0016577.1 mouse_genomes_project 1 155104117 155114287 - MGP_129S1SvImJ_P0022574 protein_coding protein_coding MGP_129S1SvImJ_T0022575.1 MGP_129S1SvImJ_G0016577.1 mouse_genomes_project 1 155106312 155114287 - MGP_129S1SvImJ_P0022575 protein_coding protein_coding MGP_129S1SvImJ_T0011994.1 MGP_129S1SvImJ_G0010083.1 mouse_genomes_project 1 37608798 37609570 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000600.1 MGP_129S1SvImJ_G0000539.1 mouse_genomes_project 1 99654600 99656284 - TEC TEC MGP_129S1SvImJ_T0024265.1 MGP_129S1SvImJ_G0016951.1 mouse_genomes_project 1 199074034 199075446 - Traf5 protein_coding retained_intron MGP_129S1SvImJ_T0024266.1 MGP_129S1SvImJ_G0016951.1 mouse_genomes_project 1 199074034 199076783 - MGP_129S1SvImJ_P0024266 Traf5 protein_coding protein_coding MGP_129S1SvImJ_T0024267.1 MGP_129S1SvImJ_G0016951.1 mouse_genomes_project 1 199074259 199120726 - MGP_129S1SvImJ_P0024267 Traf5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0024268.1 MGP_129S1SvImJ_G0016951.1 mouse_genomes_project 1 199074259 199120790 - MGP_129S1SvImJ_P0024268 Traf5 protein_coding protein_coding MGP_129S1SvImJ_T0024269.1 MGP_129S1SvImJ_G0016951.1 mouse_genomes_project 1 199083600 199088367 - MGP_129S1SvImJ_P0024269 Traf5 protein_coding protein_coding MGP_129S1SvImJ_T0024270.1 MGP_129S1SvImJ_G0016951.1 mouse_genomes_project 1 199084628 199088367 - Traf5 protein_coding retained_intron MGP_129S1SvImJ_T0006003.1 MGP_129S1SvImJ_G0005031.1 mouse_genomes_project 1 171901653 171903686 - Gm15853 lincRNA lincRNA MGP_129S1SvImJ_T0005930.1 MGP_129S1SvImJ_G0004975.1 mouse_genomes_project 1 140064391 140067196 + A430034D21Rik lincRNA lincRNA MGP_129S1SvImJ_T0012022.1 MGP_129S1SvImJ_G0010111.1 mouse_genomes_project 1 45094594 45094858 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011887.1 MGP_129S1SvImJ_G0009976.1 mouse_genomes_project 1 4251422 4251581 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009557.1 MGP_129S1SvImJ_G0007673.1 mouse_genomes_project 1 167542514 167542624 + Mir199a-2 miRNA miRNA MGP_129S1SvImJ_T0022234.1 MGP_129S1SvImJ_G0016508.1 mouse_genomes_project 1 138114963 138129763 + Klhl12 protein_coding retained_intron MGP_129S1SvImJ_T0022235.1 MGP_129S1SvImJ_G0016508.1 mouse_genomes_project 1 138114963 138159000 + MGP_129S1SvImJ_P0022235 Klhl12 protein_coding protein_coding MGP_129S1SvImJ_T0022236.1 MGP_129S1SvImJ_G0016508.1 mouse_genomes_project 1 138114963 138159145 + MGP_129S1SvImJ_P0022236 Klhl12 protein_coding protein_coding MGP_129S1SvImJ_T0022237.1 MGP_129S1SvImJ_G0016508.1 mouse_genomes_project 1 138114987 138159000 + MGP_129S1SvImJ_P0022237 Klhl12 protein_coding protein_coding MGP_129S1SvImJ_T0022238.1 MGP_129S1SvImJ_G0016508.1 mouse_genomes_project 1 138131763 138136943 + Klhl12 protein_coding retained_intron MGP_129S1SvImJ_T0022239.1 MGP_129S1SvImJ_G0016508.1 mouse_genomes_project 1 138138352 138152282 + Klhl12 protein_coding retained_intron MGP_129S1SvImJ_T0099057.1 MGP_129S1SvImJ_G0037124.1 mouse_genomes_project 1 789647 789705 - Gm27396 snRNA snRNA MGP_129S1SvImJ_T0024045.1 MGP_129S1SvImJ_G0016904.1 mouse_genomes_project 1 190049798 190071928 + MGP_129S1SvImJ_P0024045 Taf1a protein_coding protein_coding MGP_129S1SvImJ_T0024046.1 MGP_129S1SvImJ_G0016904.1 mouse_genomes_project 1 190049802 190069586 + MGP_129S1SvImJ_P0024046 Taf1a protein_coding protein_coding MGP_129S1SvImJ_T0024047.1 MGP_129S1SvImJ_G0016904.1 mouse_genomes_project 1 190049871 190072785 + MGP_129S1SvImJ_P0024047 Taf1a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0024048.1 MGP_129S1SvImJ_G0016904.1 mouse_genomes_project 1 190071183 190072786 + MGP_129S1SvImJ_P0024048 Taf1a protein_coding protein_coding MGP_129S1SvImJ_T0012010.1 MGP_129S1SvImJ_G0010099.1 mouse_genomes_project 1 43673817 43674237 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000411.1 MGP_129S1SvImJ_G0000353.1 mouse_genomes_project 1 11016700 11018776 - TEC TEC MGP_129S1SvImJ_T0021959.1 MGP_129S1SvImJ_G0016449.1 mouse_genomes_project 1 134547854 134558625 - MGP_129S1SvImJ_P0021959 Dyrk3 protein_coding protein_coding MGP_129S1SvImJ_T0021960.1 MGP_129S1SvImJ_G0016449.1 mouse_genomes_project 1 134550274 134558530 - MGP_129S1SvImJ_P0021960 Dyrk3 protein_coding protein_coding MGP_129S1SvImJ_T0000513.1 MGP_129S1SvImJ_G0000452.1 mouse_genomes_project 1 60860858 60865076 + TEC TEC MGP_129S1SvImJ_T0000734.1 MGP_129S1SvImJ_G0000671.1 mouse_genomes_project 1 165513426 165514572 - TEC TEC MGP_129S1SvImJ_T0019243.1 MGP_129S1SvImJ_G0015908.1 mouse_genomes_project 1 32824666 32835124 + MGP_129S1SvImJ_P0019243 Imp4 protein_coding protein_coding MGP_129S1SvImJ_T0019244.1 MGP_129S1SvImJ_G0015908.1 mouse_genomes_project 1 32824713 32827067 + Imp4 protein_coding retained_intron MGP_129S1SvImJ_T0019245.1 MGP_129S1SvImJ_G0015908.1 mouse_genomes_project 1 32824720 32828387 + MGP_129S1SvImJ_P0019245 Imp4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019246.1 MGP_129S1SvImJ_G0015908.1 mouse_genomes_project 1 32824720 32828918 + MGP_129S1SvImJ_P0019246 Imp4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019247.1 MGP_129S1SvImJ_G0015908.1 mouse_genomes_project 1 32824752 32828558 + Imp4 protein_coding processed_transcript MGP_129S1SvImJ_T0019248.1 MGP_129S1SvImJ_G0015908.1 mouse_genomes_project 1 32824768 32827970 + Imp4 protein_coding processed_transcript MGP_129S1SvImJ_T0019249.1 MGP_129S1SvImJ_G0015908.1 mouse_genomes_project 1 32824856 32829045 + MGP_129S1SvImJ_P0019249 Imp4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019250.1 MGP_129S1SvImJ_G0015908.1 mouse_genomes_project 1 32834014 32834708 + Imp4 protein_coding processed_transcript MGP_129S1SvImJ_T0022545.1 MGP_129S1SvImJ_G0016573.1 mouse_genomes_project 1 154909350 154911355 - MGP_129S1SvImJ_P0022545 Bex4 protein_coding protein_coding MGP_129S1SvImJ_T0000547.1 MGP_129S1SvImJ_G0000486.1 mouse_genomes_project 1 76046375 76048566 - TEC TEC MGP_129S1SvImJ_T0012301.1 MGP_129S1SvImJ_G0010390.1 mouse_genomes_project 1 156242779 156243644 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021336.1 MGP_129S1SvImJ_G0016309.1 mouse_genomes_project 1 92953731 92955471 - Hes6 protein_coding retained_intron MGP_129S1SvImJ_T0021337.1 MGP_129S1SvImJ_G0016309.1 mouse_genomes_project 1 92953731 92955457 - Hes6 protein_coding retained_intron MGP_129S1SvImJ_T0021338.1 MGP_129S1SvImJ_G0016309.1 mouse_genomes_project 1 92953731 92955471 - MGP_129S1SvImJ_P0021338 Hes6 protein_coding protein_coding MGP_129S1SvImJ_T0021339.1 MGP_129S1SvImJ_G0016309.1 mouse_genomes_project 1 92954535 92955457 - Hes6 protein_coding retained_intron MGP_129S1SvImJ_T0021340.1 MGP_129S1SvImJ_G0016309.1 mouse_genomes_project 1 92954596 92956287 - Hes6 protein_coding processed_transcript MGP_129S1SvImJ_T0009520.1 MGP_129S1SvImJ_G0007636.1 mouse_genomes_project 1 83766300 83766353 + Gm22396 miRNA miRNA MGP_129S1SvImJ_T0098779.1 MGP_129S1SvImJ_G0036864.1 mouse_genomes_project 1 69954193 69957680 - Gm29112 sense_intronic sense_intronic MGP_129S1SvImJ_T0019566.1 MGP_129S1SvImJ_G0015969.1 mouse_genomes_project 1 39313873 39352831 + MGP_129S1SvImJ_P0019566 Il18rap protein_coding protein_coding MGP_129S1SvImJ_T0019567.1 MGP_129S1SvImJ_G0015969.1 mouse_genomes_project 1 39313916 39338345 + Il18rap protein_coding retained_intron MGP_129S1SvImJ_T0019568.1 MGP_129S1SvImJ_G0015969.1 mouse_genomes_project 1 39313959 39325509 + Il18rap protein_coding retained_intron MGP_129S1SvImJ_T0019569.1 MGP_129S1SvImJ_G0015969.1 mouse_genomes_project 1 39340554 39349029 + Il18rap protein_coding retained_intron MGP_129S1SvImJ_T0000398.1 MGP_129S1SvImJ_G0000340.1 mouse_genomes_project 1 7474283 7476005 - TEC TEC MGP_129S1SvImJ_T0024054.1 MGP_129S1SvImJ_G0016907.1 mouse_genomes_project 1 190664035 190665307 - 1700056E22Rik protein_coding antisense MGP_129S1SvImJ_T0024055.1 MGP_129S1SvImJ_G0016907.1 mouse_genomes_project 1 190664037 190665004 - MGP_129S1SvImJ_P0024055 1700056E22Rik protein_coding protein_coding MGP_129S1SvImJ_T0009572.1 MGP_129S1SvImJ_G0007688.1 mouse_genomes_project 1 191517588 191517670 - Mir1981 miRNA miRNA MGP_129S1SvImJ_T0099085.1 MGP_129S1SvImJ_G0037152.1 mouse_genomes_project 1 63449701 63449805 - Gm23448 snRNA snRNA MGP_129S1SvImJ_T0021531.1 MGP_129S1SvImJ_G0016351.1 mouse_genomes_project 1 95472832 95474381 + MGP_129S1SvImJ_P0021531 protein_coding protein_coding MGP_129S1SvImJ_T0012103.1 MGP_129S1SvImJ_G0010192.1 mouse_genomes_project 1 67884190 67886174 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000705.1 MGP_129S1SvImJ_G0000642.1 mouse_genomes_project 1 156174437 156177227 + TEC TEC MGP_129S1SvImJ_T0022468.1 MGP_129S1SvImJ_G0016555.1 mouse_genomes_project 1 143612268 143625412 - MGP_129S1SvImJ_P0022468 Cfhr1 protein_coding protein_coding MGP_129S1SvImJ_T0022470.1 MGP_129S1SvImJ_G0016555.1 mouse_genomes_project 1 143615901 143618819 - MGP_129S1SvImJ_P0022470 Cfhr1 protein_coding protein_coding MGP_129S1SvImJ_T0023367.1 MGP_129S1SvImJ_G0016739.1 mouse_genomes_project 1 176772470 176783337 + MGP_129S1SvImJ_P0023367 Fcgr4 protein_coding protein_coding MGP_129S1SvImJ_T0005680.1 MGP_129S1SvImJ_G0004781.1 mouse_genomes_project 1 18461128 18464148 + Gm28065 lincRNA lincRNA MGP_129S1SvImJ_T0002969.1 MGP_129S1SvImJ_G0002791.1 mouse_genomes_project 1 177301135 177304853 - B930036N10Rik antisense antisense MGP_129S1SvImJ_T0002970.1 MGP_129S1SvImJ_G0002791.1 mouse_genomes_project 1 177303550 177304853 - B930036N10Rik antisense antisense MGP_129S1SvImJ_T0012353.1 MGP_129S1SvImJ_G0010442.1 mouse_genomes_project 1 177937792 177938122 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023099.1 MGP_129S1SvImJ_G0016674.1 mouse_genomes_project 1 169329743 169355342 + MGP_129S1SvImJ_P0023099 Scyl3 protein_coding protein_coding MGP_129S1SvImJ_T0023100.1 MGP_129S1SvImJ_G0016674.1 mouse_genomes_project 1 169330404 169355766 + MGP_129S1SvImJ_P0023100 Scyl3 protein_coding protein_coding MGP_129S1SvImJ_T0023101.1 MGP_129S1SvImJ_G0016674.1 mouse_genomes_project 1 169330429 169355750 + MGP_129S1SvImJ_P0023101 Scyl3 protein_coding protein_coding MGP_129S1SvImJ_T0023102.1 MGP_129S1SvImJ_G0016674.1 mouse_genomes_project 1 169330444 169355749 + MGP_129S1SvImJ_P0023102 Scyl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023103.1 MGP_129S1SvImJ_G0016674.1 mouse_genomes_project 1 169341754 169355754 + MGP_129S1SvImJ_P0023103 Scyl3 protein_coding protein_coding MGP_129S1SvImJ_T0023104.1 MGP_129S1SvImJ_G0016674.1 mouse_genomes_project 1 169344410 169345484 + Scyl3 protein_coding processed_transcript MGP_129S1SvImJ_T0023106.1 MGP_129S1SvImJ_G0016674.1 mouse_genomes_project 1 169351852 169354442 + Scyl3 protein_coding retained_intron MGP_129S1SvImJ_T0011970.1 MGP_129S1SvImJ_G0010059.1 mouse_genomes_project 1 31589194 31590887 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000519.1 MGP_129S1SvImJ_G0000458.1 mouse_genomes_project 1 61785967 61787332 + TEC TEC MGP_129S1SvImJ_T0000379.1 MGP_129S1SvImJ_G0000321.1 mouse_genomes_project 1 500568 502625 - TEC TEC MGP_129S1SvImJ_T0000452.1 MGP_129S1SvImJ_G0000392.1 mouse_genomes_project 1 29028521 29031404 - TEC TEC MGP_129S1SvImJ_T0012272.1 MGP_129S1SvImJ_G0010361.1 mouse_genomes_project 1 143025995 143026629 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021888.1 MGP_129S1SvImJ_G0016427.1 mouse_genomes_project 1 131480321 131496725 + MGP_129S1SvImJ_P0021888 Ubxn4 protein_coding protein_coding MGP_129S1SvImJ_T0021889.1 MGP_129S1SvImJ_G0016427.1 mouse_genomes_project 1 131480519 131516306 + MGP_129S1SvImJ_P0021889 Ubxn4 protein_coding protein_coding MGP_129S1SvImJ_T0021890.1 MGP_129S1SvImJ_G0016427.1 mouse_genomes_project 1 131496693 131510094 + Ubxn4 protein_coding retained_intron MGP_129S1SvImJ_T0021891.1 MGP_129S1SvImJ_G0016427.1 mouse_genomes_project 1 131511554 131513948 + Ubxn4 protein_coding retained_intron MGP_129S1SvImJ_T0000729.1 MGP_129S1SvImJ_G0000666.1 mouse_genomes_project 1 163653751 163656893 - TEC TEC MGP_129S1SvImJ_T0009580.1 MGP_129S1SvImJ_G0007696.1 mouse_genomes_project 1 202218564 202218645 + Mir29b-2 miRNA miRNA MGP_129S1SvImJ_T0098414.1 MGP_129S1SvImJ_G0036499.1 mouse_genomes_project 1 74326462 74326588 + Gm25329 rRNA rRNA MGP_129S1SvImJ_T0000770.1 MGP_129S1SvImJ_G0000707.1 mouse_genomes_project 1 182143899 182145543 - TEC TEC MGP_129S1SvImJ_T0000488.1 MGP_129S1SvImJ_G0000427.1 mouse_genomes_project 1 42566364 42567649 + TEC TEC MGP_129S1SvImJ_T0022970.1 MGP_129S1SvImJ_G0016648.1 mouse_genomes_project 1 166325344 166341178 + MGP_129S1SvImJ_P0022970 Cenpl protein_coding protein_coding MGP_129S1SvImJ_T0022971.1 MGP_129S1SvImJ_G0016648.1 mouse_genomes_project 1 166325398 166340796 + MGP_129S1SvImJ_P0022971 Cenpl protein_coding protein_coding MGP_129S1SvImJ_T0022972.1 MGP_129S1SvImJ_G0016648.1 mouse_genomes_project 1 166325398 166340796 + MGP_129S1SvImJ_P0022972 Cenpl protein_coding protein_coding MGP_129S1SvImJ_T0022973.1 MGP_129S1SvImJ_G0016648.1 mouse_genomes_project 1 166325523 166340782 + MGP_129S1SvImJ_P0022973 Cenpl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022974.1 MGP_129S1SvImJ_G0016648.1 mouse_genomes_project 1 166325581 166340782 + MGP_129S1SvImJ_P0022974 Cenpl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022975.1 MGP_129S1SvImJ_G0016648.1 mouse_genomes_project 1 166325597 166341182 + MGP_129S1SvImJ_P0022975 Cenpl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022976.1 MGP_129S1SvImJ_G0016648.1 mouse_genomes_project 1 166325616 166337926 + MGP_129S1SvImJ_P0022976 Cenpl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022977.1 MGP_129S1SvImJ_G0016648.1 mouse_genomes_project 1 166325647 166340796 + MGP_129S1SvImJ_P0022977 Cenpl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022978.1 MGP_129S1SvImJ_G0016648.1 mouse_genomes_project 1 166327035 166327635 + Cenpl protein_coding processed_transcript MGP_129S1SvImJ_T0022979.1 MGP_129S1SvImJ_G0016648.1 mouse_genomes_project 1 166330492 166337837 + Cenpl protein_coding processed_transcript MGP_129S1SvImJ_T0023798.1 MGP_129S1SvImJ_G0016856.1 mouse_genomes_project 1 184704304 184790071 + MGP_129S1SvImJ_P0023798 Efcab2 protein_coding protein_coding MGP_129S1SvImJ_T0023799.1 MGP_129S1SvImJ_G0016856.1 mouse_genomes_project 1 184704371 184738221 + Efcab2 protein_coding processed_transcript MGP_129S1SvImJ_T0023800.1 MGP_129S1SvImJ_G0016856.1 mouse_genomes_project 1 184750145 184786960 + Efcab2 protein_coding processed_transcript MGP_129S1SvImJ_T0019886.1 MGP_129S1SvImJ_G0016032.1 mouse_genomes_project 1 54853838 54878672 + MGP_129S1SvImJ_P0019886 Mob4 protein_coding protein_coding MGP_129S1SvImJ_T0019887.1 MGP_129S1SvImJ_G0016032.1 mouse_genomes_project 1 54853838 54880809 + MGP_129S1SvImJ_P0019887 Mob4 protein_coding protein_coding MGP_129S1SvImJ_T0019888.1 MGP_129S1SvImJ_G0016032.1 mouse_genomes_project 1 54853867 54880808 + Mob4 protein_coding retained_intron MGP_129S1SvImJ_T0019889.1 MGP_129S1SvImJ_G0016032.1 mouse_genomes_project 1 54853889 54877733 + MGP_129S1SvImJ_P0019889 Mob4 protein_coding protein_coding MGP_129S1SvImJ_T0019890.1 MGP_129S1SvImJ_G0016032.1 mouse_genomes_project 1 54853894 54878093 + MGP_129S1SvImJ_P0019890 Mob4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019891.1 MGP_129S1SvImJ_G0016032.1 mouse_genomes_project 1 54853927 54877517 + MGP_129S1SvImJ_P0019891 Mob4 protein_coding protein_coding MGP_129S1SvImJ_T0019892.1 MGP_129S1SvImJ_G0016032.1 mouse_genomes_project 1 54853933 54868492 + Mob4 protein_coding retained_intron MGP_129S1SvImJ_T0019893.1 MGP_129S1SvImJ_G0016032.1 mouse_genomes_project 1 54872353 54873241 + Mob4 protein_coding retained_intron MGP_129S1SvImJ_T0012273.1 MGP_129S1SvImJ_G0010362.1 mouse_genomes_project 1 143035038 143035594 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000442.1 MGP_129S1SvImJ_G0000382.1 mouse_genomes_project 1 23612551 23615242 - TEC TEC MGP_129S1SvImJ_T0002960.1 MGP_129S1SvImJ_G0002783.1 mouse_genomes_project 1 170987760 170989137 - Gm38325 antisense antisense MGP_129S1SvImJ_T0022430.1 MGP_129S1SvImJ_G0016546.1 mouse_genomes_project 1 142300892 142316617 + MGP_129S1SvImJ_P0022430 Atp6v1g3 protein_coding protein_coding MGP_129S1SvImJ_T0009529.1 MGP_129S1SvImJ_G0007645.1 mouse_genomes_project 1 94451322 94451388 + Mir149 miRNA miRNA MGP_129S1SvImJ_T0000595.1 MGP_129S1SvImJ_G0000534.1 mouse_genomes_project 1 97026567 97029105 + TEC TEC MGP_129S1SvImJ_T0000443.1 MGP_129S1SvImJ_G0000383.1 mouse_genomes_project 1 23631400 23635488 - TEC TEC MGP_129S1SvImJ_T0011907.1 MGP_129S1SvImJ_G0009996.1 mouse_genomes_project 1 7847494 7848944 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100371.1 MGP_129S1SvImJ_G0038438.1 mouse_genomes_project 1 136318180 136318301 - Gm22609 snoRNA snoRNA MGP_129S1SvImJ_T0005834.1 MGP_129S1SvImJ_G0004893.1 mouse_genomes_project 1 86985293 86994760 + 9930111H07Rik lincRNA lincRNA MGP_129S1SvImJ_T0000732.1 MGP_129S1SvImJ_G0000669.1 mouse_genomes_project 1 164753666 164755903 + TEC TEC MGP_129S1SvImJ_T0022269.1 MGP_129S1SvImJ_G0016515.1 mouse_genomes_project 1 138710387 138840813 - MGP_129S1SvImJ_P0022269 Lgr6 protein_coding protein_coding MGP_129S1SvImJ_T0022270.1 MGP_129S1SvImJ_G0016515.1 mouse_genomes_project 1 138713994 138840539 - MGP_129S1SvImJ_P0022270 Lgr6 protein_coding protein_coding MGP_129S1SvImJ_T0022271.1 MGP_129S1SvImJ_G0016515.1 mouse_genomes_project 1 138730180 138750436 - Lgr6 protein_coding processed_transcript MGP_129S1SvImJ_T0019447.1 MGP_129S1SvImJ_G0015944.1 mouse_genomes_project 1 36538948 36547008 + MGP_129S1SvImJ_P0019447 Mrpl30 protein_coding protein_coding MGP_129S1SvImJ_T0019448.1 MGP_129S1SvImJ_G0015944.1 mouse_genomes_project 1 36539003 36546837 + MGP_129S1SvImJ_P0019448 Mrpl30 protein_coding protein_coding MGP_129S1SvImJ_T0019449.1 MGP_129S1SvImJ_G0015944.1 mouse_genomes_project 1 36539004 36541719 + Mrpl30 protein_coding retained_intron MGP_129S1SvImJ_T0019450.1 MGP_129S1SvImJ_G0015944.1 mouse_genomes_project 1 36539014 36542457 + MGP_129S1SvImJ_P0019450 Mrpl30 protein_coding protein_coding MGP_129S1SvImJ_T0019451.1 MGP_129S1SvImJ_G0015944.1 mouse_genomes_project 1 36541405 36546638 + MGP_129S1SvImJ_P0019451 Mrpl30 protein_coding protein_coding MGP_129S1SvImJ_T0019452.1 MGP_129S1SvImJ_G0015944.1 mouse_genomes_project 1 36542407 36546811 + MGP_129S1SvImJ_P0019452 Mrpl30 protein_coding protein_coding MGP_129S1SvImJ_T0019453.1 MGP_129S1SvImJ_G0015944.1 mouse_genomes_project 1 36545728 36546598 + Mrpl30 protein_coding retained_intron MGP_129S1SvImJ_T0011910.1 MGP_129S1SvImJ_G0009999.1 mouse_genomes_project 1 8180289 8181059 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020937.1 MGP_129S1SvImJ_G0016223.1 mouse_genomes_project 1 84082926 84085327 + MGP_129S1SvImJ_P0020937 Ccl20 protein_coding protein_coding MGP_129S1SvImJ_T0020938.1 MGP_129S1SvImJ_G0016223.1 mouse_genomes_project 1 84082934 84085328 + MGP_129S1SvImJ_P0020938 Ccl20 protein_coding protein_coding MGP_129S1SvImJ_T0020939.1 MGP_129S1SvImJ_G0016223.1 mouse_genomes_project 1 84082953 84085328 + MGP_129S1SvImJ_P0020939 Ccl20 protein_coding protein_coding MGP_129S1SvImJ_T0005945.1 MGP_129S1SvImJ_G0004986.1 mouse_genomes_project 1 142209067 142212506 - lincRNA lincRNA MGP_129S1SvImJ_T0100399.1 MGP_129S1SvImJ_G0038466.1 mouse_genomes_project 1 177098165 177098256 + Gm25151 snoRNA snoRNA MGP_129S1SvImJ_T0019083.1 MGP_129S1SvImJ_G0015875.1 mouse_genomes_project 1 18628350 18710063 - MGP_129S1SvImJ_P0019083 Tram2 protein_coding protein_coding MGP_129S1SvImJ_T0019084.1 MGP_129S1SvImJ_G0015875.1 mouse_genomes_project 1 18636326 18671330 - Tram2 protein_coding processed_transcript MGP_129S1SvImJ_T0017016.1 MGP_129S1SvImJ_G0015094.1 mouse_genomes_project 1 38294185 38298613 - Gm15832 processed_transcript processed_transcript MGP_129S1SvImJ_T0005705.1 MGP_129S1SvImJ_G0004803.1 mouse_genomes_project 1 34633741 34641691 + Gm33280 lincRNA lincRNA MGP_129S1SvImJ_T0023120.1 MGP_129S1SvImJ_G0016679.1 mouse_genomes_project 1 169532276 169572837 + MGP_129S1SvImJ_P0023120 Selp protein_coding protein_coding MGP_129S1SvImJ_T0023121.1 MGP_129S1SvImJ_G0016679.1 mouse_genomes_project 1 169564103 169565578 + Selp protein_coding retained_intron MGP_129S1SvImJ_T0023122.1 MGP_129S1SvImJ_G0016679.1 mouse_genomes_project 1 169564662 169571876 + MGP_129S1SvImJ_P0023122 Selp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023123.1 MGP_129S1SvImJ_G0016679.1 mouse_genomes_project 1 169567487 169572822 + Selp protein_coding retained_intron MGP_129S1SvImJ_T0023124.1 MGP_129S1SvImJ_G0016679.1 mouse_genomes_project 1 169569496 169571889 + Selp protein_coding retained_intron MGP_129S1SvImJ_T0022743.1 MGP_129S1SvImJ_G0016612.1 mouse_genomes_project 1 160120918 160122429 - BC034090 protein_coding retained_intron MGP_129S1SvImJ_T0022744.1 MGP_129S1SvImJ_G0016612.1 mouse_genomes_project 1 160120920 160152482 - MGP_129S1SvImJ_P0022744 BC034090 protein_coding protein_coding MGP_129S1SvImJ_T0022745.1 MGP_129S1SvImJ_G0016612.1 mouse_genomes_project 1 160125968 160133658 - BC034090 protein_coding processed_transcript MGP_129S1SvImJ_T0022746.1 MGP_129S1SvImJ_G0016612.1 mouse_genomes_project 1 160126718 160133407 - BC034090 protein_coding processed_transcript MGP_129S1SvImJ_T0022747.1 MGP_129S1SvImJ_G0016612.1 mouse_genomes_project 1 160133922 160138127 - BC034090 protein_coding processed_transcript MGP_129S1SvImJ_T0022748.1 MGP_129S1SvImJ_G0016612.1 mouse_genomes_project 1 160134272 160141144 - MGP_129S1SvImJ_P0022748 BC034090 protein_coding protein_coding MGP_129S1SvImJ_T0022749.1 MGP_129S1SvImJ_G0016612.1 mouse_genomes_project 1 160134356 160149166 - BC034090 protein_coding retained_intron MGP_129S1SvImJ_T0022750.1 MGP_129S1SvImJ_G0016612.1 mouse_genomes_project 1 160137346 160140137 - BC034090 protein_coding retained_intron MGP_129S1SvImJ_T0021277.1 MGP_129S1SvImJ_G0016300.1 mouse_genomes_project 1 92524046 92640469 + MGP_129S1SvImJ_P0021277 Lrrfip1 protein_coding protein_coding MGP_129S1SvImJ_T0021278.1 MGP_129S1SvImJ_G0016300.1 mouse_genomes_project 1 92524086 92654389 + MGP_129S1SvImJ_P0021278 Lrrfip1 protein_coding protein_coding MGP_129S1SvImJ_T0021279.1 MGP_129S1SvImJ_G0016300.1 mouse_genomes_project 1 92524088 92660817 + MGP_129S1SvImJ_P0021279 Lrrfip1 protein_coding protein_coding MGP_129S1SvImJ_T0021280.1 MGP_129S1SvImJ_G0016300.1 mouse_genomes_project 1 92583991 92660821 + MGP_129S1SvImJ_P0021280 Lrrfip1 protein_coding protein_coding MGP_129S1SvImJ_T0021281.1 MGP_129S1SvImJ_G0016300.1 mouse_genomes_project 1 92584006 92649153 + MGP_129S1SvImJ_P0021281 Lrrfip1 protein_coding protein_coding MGP_129S1SvImJ_T0021282.1 MGP_129S1SvImJ_G0016300.1 mouse_genomes_project 1 92584059 92660795 + MGP_129S1SvImJ_P0021282 Lrrfip1 protein_coding protein_coding MGP_129S1SvImJ_T0021283.1 MGP_129S1SvImJ_G0016300.1 mouse_genomes_project 1 92584059 92632361 + MGP_129S1SvImJ_P0021283 Lrrfip1 protein_coding protein_coding MGP_129S1SvImJ_T0021284.1 MGP_129S1SvImJ_G0016300.1 mouse_genomes_project 1 92584063 92649158 + MGP_129S1SvImJ_P0021284 Lrrfip1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0021285.1 MGP_129S1SvImJ_G0016300.1 mouse_genomes_project 1 92584138 92660164 + MGP_129S1SvImJ_P0021285 Lrrfip1 protein_coding protein_coding MGP_129S1SvImJ_T0021286.1 MGP_129S1SvImJ_G0016300.1 mouse_genomes_project 1 92643064 92648759 + Lrrfip1 protein_coding processed_transcript MGP_129S1SvImJ_T0021287.1 MGP_129S1SvImJ_G0016300.1 mouse_genomes_project 1 92643083 92646696 + Lrrfip1 protein_coding processed_transcript MGP_129S1SvImJ_T0021288.1 MGP_129S1SvImJ_G0016300.1 mouse_genomes_project 1 92651797 92654375 + Lrrfip1 protein_coding processed_transcript MGP_129S1SvImJ_T0021289.1 MGP_129S1SvImJ_G0016300.1 mouse_genomes_project 1 92657229 92660055 + Lrrfip1 protein_coding retained_intron MGP_129S1SvImJ_T0101827.1 MGP_129S1SvImJ_G0039784.1 mouse_genomes_project 1 18943407 18956550 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101828.1 MGP_129S1SvImJ_G0039784.1 mouse_genomes_project 1 18943769 18956365 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101829.1 MGP_129S1SvImJ_G0039784.1 mouse_genomes_project 1 18948238 18956485 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0002783.1 MGP_129S1SvImJ_G0002649.1 mouse_genomes_project 1 15236844 15289090 - Gm16070 antisense antisense MGP_129S1SvImJ_T0002784.1 MGP_129S1SvImJ_G0002649.1 mouse_genomes_project 1 15248461 15289452 - Gm16070 antisense antisense MGP_129S1SvImJ_T0002785.1 MGP_129S1SvImJ_G0002649.1 mouse_genomes_project 1 15286788 15289061 - Gm16070 antisense antisense MGP_129S1SvImJ_T0020017.1 MGP_129S1SvImJ_G0016057.1 mouse_genomes_project 1 58634300 58635642 + Cflar protein_coding processed_transcript MGP_129S1SvImJ_T0020018.1 MGP_129S1SvImJ_G0016057.1 mouse_genomes_project 1 58634300 58681592 + Cflar protein_coding processed_transcript MGP_129S1SvImJ_T0020019.1 MGP_129S1SvImJ_G0016057.1 mouse_genomes_project 1 58634302 58658464 + Cflar protein_coding processed_transcript MGP_129S1SvImJ_T0020020.1 MGP_129S1SvImJ_G0016057.1 mouse_genomes_project 1 58634308 58636059 + Cflar protein_coding processed_transcript MGP_129S1SvImJ_T0020021.1 MGP_129S1SvImJ_G0016057.1 mouse_genomes_project 1 58634326 58635645 + Cflar protein_coding processed_transcript MGP_129S1SvImJ_T0020022.1 MGP_129S1SvImJ_G0016057.1 mouse_genomes_project 1 58634336 58641036 + Cflar protein_coding processed_transcript MGP_129S1SvImJ_T0020023.1 MGP_129S1SvImJ_G0016057.1 mouse_genomes_project 1 58634343 58681227 + MGP_129S1SvImJ_P0020023 Cflar protein_coding protein_coding MGP_129S1SvImJ_T0020024.1 MGP_129S1SvImJ_G0016057.1 mouse_genomes_project 1 58634352 58686115 + MGP_129S1SvImJ_P0020024 Cflar protein_coding protein_coding MGP_129S1SvImJ_T0020025.1 MGP_129S1SvImJ_G0016057.1 mouse_genomes_project 1 58635049 58660445 + MGP_129S1SvImJ_P0020025 Cflar protein_coding protein_coding MGP_129S1SvImJ_T0020026.1 MGP_129S1SvImJ_G0016057.1 mouse_genomes_project 1 58635057 58648550 + Cflar protein_coding processed_transcript MGP_129S1SvImJ_T0020027.1 MGP_129S1SvImJ_G0016057.1 mouse_genomes_project 1 58635072 58682416 + MGP_129S1SvImJ_P0020027 Cflar protein_coding protein_coding MGP_129S1SvImJ_T0020028.1 MGP_129S1SvImJ_G0016057.1 mouse_genomes_project 1 58635641 58641044 + Cflar protein_coding retained_intron MGP_129S1SvImJ_T0020030.1 MGP_129S1SvImJ_G0016057.1 mouse_genomes_project 1 58658369 58679704 + Cflar protein_coding processed_transcript MGP_129S1SvImJ_T0021991.1 MGP_129S1SvImJ_G0016454.1 mouse_genomes_project 1 134959120 134971092 + MGP_129S1SvImJ_P0021991 Fam72a protein_coding protein_coding MGP_129S1SvImJ_T0012090.1 MGP_129S1SvImJ_G0010179.1 mouse_genomes_project 1 64327489 64330013 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005774.1 MGP_129S1SvImJ_G0004850.1 mouse_genomes_project 1 62947994 62959012 - Gm4208 lincRNA lincRNA MGP_129S1SvImJ_T0018831.1 MGP_129S1SvImJ_G0015823.1 mouse_genomes_project 1 6757104 6760099 + MGP_129S1SvImJ_P0018831 Rrs1 protein_coding protein_coding MGP_129S1SvImJ_T0020889.1 MGP_129S1SvImJ_G0016212.1 mouse_genomes_project 1 81933905 82168578 + MGP_129S1SvImJ_P0020889 Nyap2 protein_coding protein_coding MGP_129S1SvImJ_T0020890.1 MGP_129S1SvImJ_G0016212.1 mouse_genomes_project 1 81934154 82168553 + MGP_129S1SvImJ_P0020890 Nyap2 protein_coding protein_coding MGP_129S1SvImJ_T0020891.1 MGP_129S1SvImJ_G0016212.1 mouse_genomes_project 1 81934256 82138810 + MGP_129S1SvImJ_P0020891 Nyap2 protein_coding protein_coding MGP_129S1SvImJ_T0020892.1 MGP_129S1SvImJ_G0016212.1 mouse_genomes_project 1 81934263 82169740 + MGP_129S1SvImJ_P0020892 Nyap2 protein_coding protein_coding MGP_129S1SvImJ_T0020893.1 MGP_129S1SvImJ_G0016212.1 mouse_genomes_project 1 81934522 82220852 + MGP_129S1SvImJ_P0020893 Nyap2 protein_coding protein_coding MGP_129S1SvImJ_T0022930.1 MGP_129S1SvImJ_G0016643.1 mouse_genomes_project 1 165412574 165550425 - MGP_129S1SvImJ_P0022930 Rabgap1l protein_coding protein_coding MGP_129S1SvImJ_T0022931.1 MGP_129S1SvImJ_G0016643.1 mouse_genomes_project 1 165419448 165425256 - Rabgap1l protein_coding retained_intron MGP_129S1SvImJ_T0022932.1 MGP_129S1SvImJ_G0016643.1 mouse_genomes_project 1 165419964 165446066 - MGP_129S1SvImJ_P0022932 Rabgap1l protein_coding protein_coding MGP_129S1SvImJ_T0022933.1 MGP_129S1SvImJ_G0016643.1 mouse_genomes_project 1 165420016 165505420 - MGP_129S1SvImJ_P0022933 Rabgap1l protein_coding protein_coding MGP_129S1SvImJ_T0022934.1 MGP_129S1SvImJ_G0016643.1 mouse_genomes_project 1 165420066 165483759 - Rabgap1l protein_coding processed_transcript MGP_129S1SvImJ_T0022935.1 MGP_129S1SvImJ_G0016643.1 mouse_genomes_project 1 165429950 165442612 - Rabgap1l protein_coding retained_intron MGP_129S1SvImJ_T0022936.1 MGP_129S1SvImJ_G0016643.1 mouse_genomes_project 1 165442595 165445379 - Rabgap1l protein_coding processed_transcript MGP_129S1SvImJ_T0022937.1 MGP_129S1SvImJ_G0016643.1 mouse_genomes_project 1 165452717 165507252 - MGP_129S1SvImJ_P0022937 Rabgap1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022938.1 MGP_129S1SvImJ_G0016643.1 mouse_genomes_project 1 165453078 165639597 - MGP_129S1SvImJ_P0022938 Rabgap1l protein_coding protein_coding MGP_129S1SvImJ_T0022939.1 MGP_129S1SvImJ_G0016643.1 mouse_genomes_project 1 165453350 166029624 - MGP_129S1SvImJ_P0022939 Rabgap1l protein_coding protein_coding MGP_129S1SvImJ_T0022940.1 MGP_129S1SvImJ_G0016643.1 mouse_genomes_project 1 165480303 165483946 - Rabgap1l protein_coding processed_transcript MGP_129S1SvImJ_T0022941.1 MGP_129S1SvImJ_G0016643.1 mouse_genomes_project 1 165485025 165491444 - Rabgap1l protein_coding processed_transcript MGP_129S1SvImJ_T0022942.1 MGP_129S1SvImJ_G0016643.1 mouse_genomes_project 1 165486737 165505858 - Rabgap1l protein_coding processed_transcript MGP_129S1SvImJ_T0022943.1 MGP_129S1SvImJ_G0016643.1 mouse_genomes_project 1 165639329 165656115 - Rabgap1l protein_coding retained_intron MGP_129S1SvImJ_T0022944.1 MGP_129S1SvImJ_G0016643.1 mouse_genomes_project 1 165891432 166029616 - MGP_129S1SvImJ_P0022944 Rabgap1l protein_coding protein_coding MGP_129S1SvImJ_T0022945.1 MGP_129S1SvImJ_G0016643.1 mouse_genomes_project 1 165967094 166029888 - MGP_129S1SvImJ_P0022945 Rabgap1l protein_coding protein_coding MGP_129S1SvImJ_T0021318.1 MGP_129S1SvImJ_G0016305.1 mouse_genomes_project 1 92863188 92890856 + MGP_129S1SvImJ_P0021318 Espnl protein_coding protein_coding MGP_129S1SvImJ_T0021319.1 MGP_129S1SvImJ_G0016305.1 mouse_genomes_project 1 92863246 92888485 + MGP_129S1SvImJ_P0021319 Espnl protein_coding protein_coding MGP_129S1SvImJ_T0023578.1 MGP_129S1SvImJ_G0016782.1 mouse_genomes_project 1 178081747 178120282 - MGP_129S1SvImJ_P0023578 Atp1a4 protein_coding protein_coding MGP_129S1SvImJ_T0023579.1 MGP_129S1SvImJ_G0016782.1 mouse_genomes_project 1 178108776 178115812 - Atp1a4 protein_coding processed_transcript MGP_129S1SvImJ_T0020824.1 MGP_129S1SvImJ_G0016198.1 mouse_genomes_project 1 79138972 79210813 - MGP_129S1SvImJ_P0020824 Farsb protein_coding protein_coding MGP_129S1SvImJ_T0020825.1 MGP_129S1SvImJ_G0016198.1 mouse_genomes_project 1 79146075 79210851 - MGP_129S1SvImJ_P0020825 Farsb protein_coding protein_coding MGP_129S1SvImJ_T0020826.1 MGP_129S1SvImJ_G0016198.1 mouse_genomes_project 1 79146092 79210816 - MGP_129S1SvImJ_P0020826 Farsb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020827.1 MGP_129S1SvImJ_G0016198.1 mouse_genomes_project 1 79183935 79210813 - MGP_129S1SvImJ_P0020827 Farsb protein_coding protein_coding MGP_129S1SvImJ_T0020828.1 MGP_129S1SvImJ_G0016198.1 mouse_genomes_project 1 79192132 79210749 - Farsb protein_coding processed_transcript MGP_129S1SvImJ_T0020829.1 MGP_129S1SvImJ_G0016198.1 mouse_genomes_project 1 79193540 79210796 - MGP_129S1SvImJ_P0020829 Farsb protein_coding protein_coding MGP_129S1SvImJ_T0020830.1 MGP_129S1SvImJ_G0016198.1 mouse_genomes_project 1 79198831 79210791 - Farsb protein_coding retained_intron MGP_129S1SvImJ_T0005709.1 MGP_129S1SvImJ_G0004807.1 mouse_genomes_project 1 37760979 37772436 - Gm37821 lincRNA lincRNA MGP_129S1SvImJ_T0018837.1 MGP_129S1SvImJ_G0015825.1 mouse_genomes_project 1 6831829 6862798 + MGP_129S1SvImJ_P0018837 3110035E14Rik protein_coding protein_coding MGP_129S1SvImJ_T0000725.1 MGP_129S1SvImJ_G0000662.1 mouse_genomes_project 1 162434760 162437157 - TEC TEC MGP_129S1SvImJ_T0021308.1 MGP_129S1SvImJ_G0016304.1 mouse_genomes_project 1 92837051 92862189 + MGP_129S1SvImJ_P0021308 Scly protein_coding protein_coding MGP_129S1SvImJ_T0021309.1 MGP_129S1SvImJ_G0016304.1 mouse_genomes_project 1 92837073 92842224 + Scly protein_coding retained_intron MGP_129S1SvImJ_T0021310.1 MGP_129S1SvImJ_G0016304.1 mouse_genomes_project 1 92837081 92848880 + MGP_129S1SvImJ_P0021310 Scly protein_coding protein_coding MGP_129S1SvImJ_T0021311.1 MGP_129S1SvImJ_G0016304.1 mouse_genomes_project 1 92837082 92849988 + MGP_129S1SvImJ_P0021311 Scly protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021312.1 MGP_129S1SvImJ_G0016304.1 mouse_genomes_project 1 92837083 92851467 + Scly protein_coding retained_intron MGP_129S1SvImJ_T0021313.1 MGP_129S1SvImJ_G0016304.1 mouse_genomes_project 1 92837117 92848846 + MGP_129S1SvImJ_P0021313 Scly protein_coding protein_coding MGP_129S1SvImJ_T0021314.1 MGP_129S1SvImJ_G0016304.1 mouse_genomes_project 1 92837120 92848952 + MGP_129S1SvImJ_P0021314 Scly protein_coding protein_coding MGP_129S1SvImJ_T0021315.1 MGP_129S1SvImJ_G0016304.1 mouse_genomes_project 1 92837140 92844150 + Scly protein_coding processed_transcript MGP_129S1SvImJ_T0021316.1 MGP_129S1SvImJ_G0016304.1 mouse_genomes_project 1 92838643 92841582 + MGP_129S1SvImJ_P0021316 Scly protein_coding protein_coding MGP_129S1SvImJ_T0021317.1 MGP_129S1SvImJ_G0016304.1 mouse_genomes_project 1 92841509 92850009 + MGP_129S1SvImJ_P0021317 Scly protein_coding protein_coding MGP_129S1SvImJ_T0098417.1 MGP_129S1SvImJ_G0036502.1 mouse_genomes_project 1 84189494 84189615 - n-R5s214 rRNA rRNA MGP_129S1SvImJ_T0102044.1 MGP_129S1SvImJ_G0039879.1 mouse_genomes_project 1 18916516 18917020 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002857.1 MGP_129S1SvImJ_G0002703.1 mouse_genomes_project 1 75816278 75821388 + Gm28294 antisense antisense MGP_129S1SvImJ_T0098422.1 MGP_129S1SvImJ_G0036507.1 mouse_genomes_project 1 121333999 121334116 - Gm22094 rRNA rRNA MGP_129S1SvImJ_T0002961.1 MGP_129S1SvImJ_G0002784.1 mouse_genomes_project 1 171359199 171360089 - Gm37469 antisense antisense MGP_129S1SvImJ_T0022639.1 MGP_129S1SvImJ_G0016589.1 mouse_genomes_project 1 157515667 157523791 + MGP_129S1SvImJ_P0022639 Apobec4 protein_coding protein_coding MGP_129S1SvImJ_T0100363.1 MGP_129S1SvImJ_G0038430.1 mouse_genomes_project 1 111934709 111934839 - Gm22159 snoRNA snoRNA MGP_129S1SvImJ_T0000745.1 MGP_129S1SvImJ_G0000682.1 mouse_genomes_project 1 166234179 166235347 + TEC TEC MGP_129S1SvImJ_T0023159.1 MGP_129S1SvImJ_G0016690.1 mouse_genomes_project 1 170691438 170718288 - MGP_129S1SvImJ_P0023159 Tiprl protein_coding protein_coding MGP_129S1SvImJ_T0023160.1 MGP_129S1SvImJ_G0016690.1 mouse_genomes_project 1 170694734 170695680 - Tiprl protein_coding retained_intron MGP_129S1SvImJ_T0023161.1 MGP_129S1SvImJ_G0016690.1 mouse_genomes_project 1 170694878 170718341 - MGP_129S1SvImJ_P0023161 Tiprl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023162.1 MGP_129S1SvImJ_G0016690.1 mouse_genomes_project 1 170701474 170718267 - Tiprl protein_coding processed_transcript MGP_129S1SvImJ_T0023163.1 MGP_129S1SvImJ_G0016690.1 mouse_genomes_project 1 170707932 170717858 - MGP_129S1SvImJ_P0023163 Tiprl protein_coding protein_coding MGP_129S1SvImJ_T0023164.1 MGP_129S1SvImJ_G0016690.1 mouse_genomes_project 1 170708791 170718277 - Tiprl protein_coding processed_transcript MGP_129S1SvImJ_T0022543.1 MGP_129S1SvImJ_G0016572.1 mouse_genomes_project 1 154740569 154750088 + MGP_129S1SvImJ_P0022543 Ptgs2 protein_coding protein_coding MGP_129S1SvImJ_T0022544.1 MGP_129S1SvImJ_G0016572.1 mouse_genomes_project 1 154740870 154741865 + MGP_129S1SvImJ_P0022544 Ptgs2 protein_coding protein_coding MGP_129S1SvImJ_T0011278.1 MGP_129S1SvImJ_G0009394.1 mouse_genomes_project 1 178565308 178565635 - Gm22383 misc_RNA misc_RNA MGP_129S1SvImJ_T0000522.1 MGP_129S1SvImJ_G0000461.1 mouse_genomes_project 1 62934558 62937106 + TEC TEC MGP_129S1SvImJ_T0011876.1 MGP_129S1SvImJ_G0009965.1 mouse_genomes_project 1 1969902 1970174 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012255.1 MGP_129S1SvImJ_G0010344.1 mouse_genomes_project 1 134870875 134871131 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019270.1 MGP_129S1SvImJ_G0015915.1 mouse_genomes_project 1 33247104 33276882 - MGP_129S1SvImJ_P0019270 Fam168b protein_coding protein_coding MGP_129S1SvImJ_T0019271.1 MGP_129S1SvImJ_G0015915.1 mouse_genomes_project 1 33247111 33276897 - MGP_129S1SvImJ_P0019271 Fam168b protein_coding protein_coding MGP_129S1SvImJ_T0019272.1 MGP_129S1SvImJ_G0015915.1 mouse_genomes_project 1 33251112 33276796 - MGP_129S1SvImJ_P0019272 Fam168b protein_coding protein_coding MGP_129S1SvImJ_T0019273.1 MGP_129S1SvImJ_G0015915.1 mouse_genomes_project 1 33251229 33276817 - MGP_129S1SvImJ_P0019273 Fam168b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019274.1 MGP_129S1SvImJ_G0015915.1 mouse_genomes_project 1 33251881 33276866 - MGP_129S1SvImJ_P0019274 Fam168b protein_coding protein_coding MGP_129S1SvImJ_T0019275.1 MGP_129S1SvImJ_G0015915.1 mouse_genomes_project 1 33253484 33276845 - Fam168b protein_coding processed_transcript MGP_129S1SvImJ_T0019276.1 MGP_129S1SvImJ_G0015915.1 mouse_genomes_project 1 33253571 33276836 - MGP_129S1SvImJ_P0019276 Fam168b protein_coding protein_coding MGP_129S1SvImJ_T0019277.1 MGP_129S1SvImJ_G0015915.1 mouse_genomes_project 1 33262563 33276897 - Fam168b protein_coding retained_intron MGP_129S1SvImJ_T0021624.1 MGP_129S1SvImJ_G0016373.1 mouse_genomes_project 1 108946995 108979654 - MGP_129S1SvImJ_P0021624 Vps4b protein_coding protein_coding MGP_129S1SvImJ_T0021625.1 MGP_129S1SvImJ_G0016373.1 mouse_genomes_project 1 108952354 108979715 - MGP_129S1SvImJ_P0021625 Vps4b protein_coding protein_coding MGP_129S1SvImJ_T0021626.1 MGP_129S1SvImJ_G0016373.1 mouse_genomes_project 1 108960222 108965717 - Vps4b protein_coding retained_intron MGP_129S1SvImJ_T0021627.1 MGP_129S1SvImJ_G0016373.1 mouse_genomes_project 1 108962365 108963547 - Vps4b protein_coding retained_intron MGP_129S1SvImJ_T0021628.1 MGP_129S1SvImJ_G0016373.1 mouse_genomes_project 1 108968726 108972873 - Vps4b protein_coding processed_transcript MGP_129S1SvImJ_T0021629.1 MGP_129S1SvImJ_G0016373.1 mouse_genomes_project 1 108974023 108979564 - Vps4b protein_coding retained_intron MGP_129S1SvImJ_T0005850.1 MGP_129S1SvImJ_G0004908.1 mouse_genomes_project 1 91761524 91764979 + Gm28723 lincRNA lincRNA MGP_129S1SvImJ_T0011276.1 MGP_129S1SvImJ_G0009392.1 mouse_genomes_project 1 145516441 145516555 + Gm22016 misc_RNA misc_RNA MGP_129S1SvImJ_T0011891.1 MGP_129S1SvImJ_G0009980.1 mouse_genomes_project 1 4557806 4558818 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022244.1 MGP_129S1SvImJ_G0016511.1 mouse_genomes_project 1 138239940 138325653 + MGP_129S1SvImJ_P0022244 Kdm5b protein_coding protein_coding MGP_129S1SvImJ_T0022245.1 MGP_129S1SvImJ_G0016511.1 mouse_genomes_project 1 138239953 138323281 + MGP_129S1SvImJ_P0022245 Kdm5b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0022246.1 MGP_129S1SvImJ_G0016511.1 mouse_genomes_project 1 138239961 138321917 + MGP_129S1SvImJ_P0022246 Kdm5b protein_coding protein_coding MGP_129S1SvImJ_T0022247.1 MGP_129S1SvImJ_G0016511.1 mouse_genomes_project 1 138239976 138297147 + Kdm5b protein_coding retained_intron MGP_129S1SvImJ_T0022248.1 MGP_129S1SvImJ_G0016511.1 mouse_genomes_project 1 138277787 138280498 + Kdm5b protein_coding retained_intron MGP_129S1SvImJ_T0022249.1 MGP_129S1SvImJ_G0016511.1 mouse_genomes_project 1 138312268 138315491 + Kdm5b protein_coding retained_intron MGP_129S1SvImJ_T0022250.1 MGP_129S1SvImJ_G0016511.1 mouse_genomes_project 1 138313188 138317591 + Kdm5b protein_coding retained_intron MGP_129S1SvImJ_T0021231.1 MGP_129S1SvImJ_G0016289.1 mouse_genomes_project 1 90520716 90601424 + MGP_129S1SvImJ_P0021231 Sh3bp4 protein_coding protein_coding MGP_129S1SvImJ_T0021232.1 MGP_129S1SvImJ_G0016289.1 mouse_genomes_project 1 90520754 90559321 + Sh3bp4 protein_coding processed_transcript MGP_129S1SvImJ_T0011909.1 MGP_129S1SvImJ_G0009998.1 mouse_genomes_project 1 8003345 8003854 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002974.1 MGP_129S1SvImJ_G0002795.1 mouse_genomes_project 1 178070803 178071463 + Gm17224 antisense antisense MGP_129S1SvImJ_T0098424.1 MGP_129S1SvImJ_G0036509.1 mouse_genomes_project 1 141988044 141988164 - Gm23782 rRNA rRNA MGP_129S1SvImJ_T0022529.1 MGP_129S1SvImJ_G0016568.1 mouse_genomes_project 1 148889194 148946559 - Rgs21 protein_coding processed_transcript MGP_129S1SvImJ_T0022530.1 MGP_129S1SvImJ_G0016568.1 mouse_genomes_project 1 148891163 148927136 - MGP_129S1SvImJ_P0022530 Rgs21 protein_coding protein_coding MGP_129S1SvImJ_T0020118.1 MGP_129S1SvImJ_G0016073.1 mouse_genomes_project 1 60120669 60157552 - MGP_129S1SvImJ_P0020118 Wdr12 protein_coding protein_coding MGP_129S1SvImJ_T0020119.1 MGP_129S1SvImJ_G0016073.1 mouse_genomes_project 1 60135126 60158289 - MGP_129S1SvImJ_P0020119 Wdr12 protein_coding protein_coding MGP_129S1SvImJ_T0020120.1 MGP_129S1SvImJ_G0016073.1 mouse_genomes_project 1 60135126 60157790 - MGP_129S1SvImJ_P0020120 Wdr12 protein_coding protein_coding MGP_129S1SvImJ_T0020121.1 MGP_129S1SvImJ_G0016073.1 mouse_genomes_project 1 60141369 60144047 - Wdr12 protein_coding retained_intron MGP_129S1SvImJ_T0020122.1 MGP_129S1SvImJ_G0016073.1 mouse_genomes_project 1 60142079 60144224 - Wdr12 protein_coding processed_transcript MGP_129S1SvImJ_T0020123.1 MGP_129S1SvImJ_G0016073.1 mouse_genomes_project 1 60146325 60157779 - MGP_129S1SvImJ_P0020123 Wdr12 protein_coding protein_coding MGP_129S1SvImJ_T0020124.1 MGP_129S1SvImJ_G0016073.1 mouse_genomes_project 1 60146325 60157769 - MGP_129S1SvImJ_P0020124 Wdr12 protein_coding protein_coding MGP_129S1SvImJ_T0020125.1 MGP_129S1SvImJ_G0016073.1 mouse_genomes_project 1 60152282 60157341 - Wdr12 protein_coding retained_intron MGP_129S1SvImJ_T0099139.1 MGP_129S1SvImJ_G0037206.1 mouse_genomes_project 1 178723555 178723652 - Gm24817 snRNA snRNA MGP_129S1SvImJ_T0011285.1 MGP_129S1SvImJ_G0009401.1 mouse_genomes_project 1 202435078 202435176 - Gm27940 misc_RNA misc_RNA MGP_129S1SvImJ_T0005977.1 MGP_129S1SvImJ_G0005011.1 mouse_genomes_project 1 165213839 165216470 - Gm37294 lincRNA lincRNA MGP_129S1SvImJ_T0100306.1 MGP_129S1SvImJ_G0038373.1 mouse_genomes_project 1 4506633 4506763 + Gm23274 snoRNA snoRNA MGP_129S1SvImJ_T0021681.1 MGP_129S1SvImJ_G0016390.1 mouse_genomes_project 1 121000547 121012481 + MGP_129S1SvImJ_P0021681 Nifk protein_coding protein_coding MGP_129S1SvImJ_T0021682.1 MGP_129S1SvImJ_G0016390.1 mouse_genomes_project 1 121000562 121011600 + MGP_129S1SvImJ_P0021682 Nifk protein_coding protein_coding MGP_129S1SvImJ_T0021683.1 MGP_129S1SvImJ_G0016390.1 mouse_genomes_project 1 121000861 121008039 + MGP_129S1SvImJ_P0021683 Nifk protein_coding protein_coding MGP_129S1SvImJ_T0005934.1 MGP_129S1SvImJ_G0004979.1 mouse_genomes_project 1 140458458 140460844 - 4933409D19Rik lincRNA lincRNA MGP_129S1SvImJ_T0002879.1 MGP_129S1SvImJ_G0002724.1 mouse_genomes_project 1 95272653 95273969 + Gm28536 antisense antisense MGP_129S1SvImJ_T0022378.1 MGP_129S1SvImJ_G0016537.1 mouse_genomes_project 1 139986042 140022564 - MGP_129S1SvImJ_P0022378 Mroh3 protein_coding protein_coding MGP_129S1SvImJ_T0022379.1 MGP_129S1SvImJ_G0016537.1 mouse_genomes_project 1 139986220 140028365 - MGP_129S1SvImJ_P0022379 Mroh3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0022380.1 MGP_129S1SvImJ_G0016537.1 mouse_genomes_project 1 139986220 139997316 - MGP_129S1SvImJ_P0022380 Mroh3 protein_coding protein_coding MGP_129S1SvImJ_T0022381.1 MGP_129S1SvImJ_G0016537.1 mouse_genomes_project 1 139986230 139987487 - Mroh3 protein_coding retained_intron MGP_129S1SvImJ_T0022382.1 MGP_129S1SvImJ_G0016537.1 mouse_genomes_project 1 139997388 140012579 - MGP_129S1SvImJ_P0022382 Mroh3 protein_coding protein_coding MGP_129S1SvImJ_T0006026.1 MGP_129S1SvImJ_G0005052.1 mouse_genomes_project 1 187728190 187730703 + A430110L20Rik lincRNA lincRNA MGP_129S1SvImJ_T0006027.1 MGP_129S1SvImJ_G0005052.1 mouse_genomes_project 1 187728280 187730695 + A430110L20Rik lincRNA lincRNA MGP_129S1SvImJ_T0005684.1 MGP_129S1SvImJ_G0004785.1 mouse_genomes_project 1 21072608 21072959 + Gm29107 lincRNA lincRNA MGP_129S1SvImJ_T0012334.1 MGP_129S1SvImJ_G0010423.1 mouse_genomes_project 1 171104418 171105250 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024175.1 MGP_129S1SvImJ_G0016931.1 mouse_genomes_project 1 197075865 197129433 - MGP_129S1SvImJ_P0024175 Prox1 protein_coding protein_coding MGP_129S1SvImJ_T0024176.1 MGP_129S1SvImJ_G0016931.1 mouse_genomes_project 1 197080283 197128112 - MGP_129S1SvImJ_P0024176 Prox1 protein_coding protein_coding MGP_129S1SvImJ_T0024177.1 MGP_129S1SvImJ_G0016931.1 mouse_genomes_project 1 197080840 197129399 - MGP_129S1SvImJ_P0024177 Prox1 protein_coding protein_coding MGP_129S1SvImJ_T0012197.1 MGP_129S1SvImJ_G0010286.1 mouse_genomes_project 1 111036934 111038805 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000816.1 MGP_129S1SvImJ_G0000751.1 mouse_genomes_project 1 196851892 196854513 - TEC TEC MGP_129S1SvImJ_T0012302.1 MGP_129S1SvImJ_G0010391.1 mouse_genomes_project 1 156255768 156256009 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021091.1 MGP_129S1SvImJ_G0016257.1 mouse_genomes_project 1 88481989 88490853 - MGP_129S1SvImJ_P0021091 Ecel1 protein_coding protein_coding MGP_129S1SvImJ_T0021092.1 MGP_129S1SvImJ_G0016257.1 mouse_genomes_project 1 88481992 88489359 - MGP_129S1SvImJ_P0021092 Ecel1 protein_coding protein_coding MGP_129S1SvImJ_T0021093.1 MGP_129S1SvImJ_G0016257.1 mouse_genomes_project 1 88481996 88490497 - MGP_129S1SvImJ_P0021093 Ecel1 protein_coding protein_coding MGP_129S1SvImJ_T0021094.1 MGP_129S1SvImJ_G0016257.1 mouse_genomes_project 1 88482216 88483251 - Ecel1 protein_coding retained_intron MGP_129S1SvImJ_T0021095.1 MGP_129S1SvImJ_G0016257.1 mouse_genomes_project 1 88489354 88489643 - Ecel1 protein_coding processed_transcript MGP_129S1SvImJ_T0012209.1 MGP_129S1SvImJ_G0010298.1 mouse_genomes_project 1 114576386 114577051 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002971.1 MGP_129S1SvImJ_G0002792.1 mouse_genomes_project 1 177465463 177466614 + Gm37787 antisense antisense MGP_129S1SvImJ_T0012168.1 MGP_129S1SvImJ_G0010257.1 mouse_genomes_project 1 101625349 101625946 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018799.1 MGP_129S1SvImJ_G0015819.1 mouse_genomes_project 1 3548601 3590065 + MGP_129S1SvImJ_P0018799 Fam150a protein_coding protein_coding MGP_129S1SvImJ_T0000408.1 MGP_129S1SvImJ_G0000350.1 mouse_genomes_project 1 10666585 10668453 - TEC TEC MGP_129S1SvImJ_T0022674.1 MGP_129S1SvImJ_G0016597.1 mouse_genomes_project 1 158279405 158312420 - MGP_129S1SvImJ_P0022674 Dhx9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0022675.1 MGP_129S1SvImJ_G0016597.1 mouse_genomes_project 1 158279410 158312359 - MGP_129S1SvImJ_P0022675 Dhx9 protein_coding protein_coding MGP_129S1SvImJ_T0022676.1 MGP_129S1SvImJ_G0016597.1 mouse_genomes_project 1 158279410 158312411 - MGP_129S1SvImJ_P0022676 Dhx9 protein_coding protein_coding MGP_129S1SvImJ_T0022677.1 MGP_129S1SvImJ_G0016597.1 mouse_genomes_project 1 158286285 158312396 - MGP_129S1SvImJ_P0022677 Dhx9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022678.1 MGP_129S1SvImJ_G0016597.1 mouse_genomes_project 1 158286291 158302890 - MGP_129S1SvImJ_P0022678 Dhx9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022679.1 MGP_129S1SvImJ_G0016597.1 mouse_genomes_project 1 158287994 158312402 - MGP_129S1SvImJ_P0022679 Dhx9 protein_coding protein_coding MGP_129S1SvImJ_T0022680.1 MGP_129S1SvImJ_G0016597.1 mouse_genomes_project 1 158295859 158302904 - Dhx9 protein_coding retained_intron MGP_129S1SvImJ_T0022681.1 MGP_129S1SvImJ_G0016597.1 mouse_genomes_project 1 158300503 158312409 - Dhx9 protein_coding retained_intron MGP_129S1SvImJ_T0022682.1 MGP_129S1SvImJ_G0016597.1 mouse_genomes_project 1 158303027 158305301 - Dhx9 protein_coding retained_intron MGP_129S1SvImJ_T0022683.1 MGP_129S1SvImJ_G0016597.1 mouse_genomes_project 1 158307121 158312385 - Dhx9 protein_coding retained_intron MGP_129S1SvImJ_T0011272.1 MGP_129S1SvImJ_G0009388.1 mouse_genomes_project 1 91140644 91140955 + Gm26037 misc_RNA misc_RNA MGP_129S1SvImJ_T0000801.1 MGP_129S1SvImJ_G0000736.1 mouse_genomes_project 1 189335057 189337011 + TEC TEC MGP_129S1SvImJ_T0021039.1 MGP_129S1SvImJ_G0016244.1 mouse_genomes_project 1 87396272 87493852 + Armc9 protein_coding retained_intron MGP_129S1SvImJ_T0021040.1 MGP_129S1SvImJ_G0016244.1 mouse_genomes_project 1 87396276 87460052 + Armc9 protein_coding retained_intron MGP_129S1SvImJ_T0021041.1 MGP_129S1SvImJ_G0016244.1 mouse_genomes_project 1 87396276 87507363 + Armc9 protein_coding retained_intron MGP_129S1SvImJ_T0021042.1 MGP_129S1SvImJ_G0016244.1 mouse_genomes_project 1 87396278 87412001 + Armc9 protein_coding retained_intron MGP_129S1SvImJ_T0021043.1 MGP_129S1SvImJ_G0016244.1 mouse_genomes_project 1 87396290 87426253 + Armc9 protein_coding processed_transcript MGP_129S1SvImJ_T0021044.1 MGP_129S1SvImJ_G0016244.1 mouse_genomes_project 1 87396290 87525350 + MGP_129S1SvImJ_P0021044 Armc9 protein_coding protein_coding MGP_129S1SvImJ_T0021045.1 MGP_129S1SvImJ_G0016244.1 mouse_genomes_project 1 87396291 87406310 + MGP_129S1SvImJ_P0021045 Armc9 protein_coding protein_coding MGP_129S1SvImJ_T0021046.1 MGP_129S1SvImJ_G0016244.1 mouse_genomes_project 1 87396302 87526936 + MGP_129S1SvImJ_P0021046 Armc9 protein_coding protein_coding MGP_129S1SvImJ_T0021047.1 MGP_129S1SvImJ_G0016244.1 mouse_genomes_project 1 87396307 87500027 + MGP_129S1SvImJ_P0021047 Armc9 protein_coding protein_coding MGP_129S1SvImJ_T0021048.1 MGP_129S1SvImJ_G0016244.1 mouse_genomes_project 1 87396311 87422158 + Armc9 protein_coding retained_intron MGP_129S1SvImJ_T0021049.1 MGP_129S1SvImJ_G0016244.1 mouse_genomes_project 1 87442765 87499930 + MGP_129S1SvImJ_P0021049 Armc9 protein_coding protein_coding MGP_129S1SvImJ_T0021050.1 MGP_129S1SvImJ_G0016244.1 mouse_genomes_project 1 87448888 87500027 + MGP_129S1SvImJ_P0021050 Armc9 protein_coding protein_coding MGP_129S1SvImJ_T0021051.1 MGP_129S1SvImJ_G0016244.1 mouse_genomes_project 1 87492091 87516467 + MGP_129S1SvImJ_P0021051 Armc9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0000625.1 MGP_129S1SvImJ_G0000564.1 mouse_genomes_project 1 126428571 126432850 - TEC TEC MGP_129S1SvImJ_T0019545.1 MGP_129S1SvImJ_G0015964.1 mouse_genomes_project 1 38857527 38896625 + MGP_129S1SvImJ_P0019545 Il1r2 protein_coding protein_coding MGP_129S1SvImJ_T0019546.1 MGP_129S1SvImJ_G0015964.1 mouse_genomes_project 1 38868083 38915750 + MGP_129S1SvImJ_P0019546 Il1r2 protein_coding protein_coding MGP_129S1SvImJ_T0019547.1 MGP_129S1SvImJ_G0015964.1 mouse_genomes_project 1 38868177 38915738 + MGP_129S1SvImJ_P0019547 Il1r2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019548.1 MGP_129S1SvImJ_G0015964.1 mouse_genomes_project 1 38869370 38886895 + MGP_129S1SvImJ_P0019548 Il1r2 protein_coding protein_coding MGP_129S1SvImJ_T0012153.1 MGP_129S1SvImJ_G0010242.1 mouse_genomes_project 1 93012303 93012496 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009565.1 MGP_129S1SvImJ_G0007681.1 mouse_genomes_project 1 176826444 176826506 - Gm27844 miRNA miRNA MGP_129S1SvImJ_T0000455.1 MGP_129S1SvImJ_G0000395.1 mouse_genomes_project 1 30812037 30813582 + TEC TEC MGP_129S1SvImJ_T0009568.1 MGP_129S1SvImJ_G0007684.1 mouse_genomes_project 1 182922549 182922648 - Mir350 miRNA miRNA MGP_129S1SvImJ_T0006072.1 MGP_129S1SvImJ_G0005085.1 mouse_genomes_project 1 198254379 198255761 + D730003I15Rik lincRNA lincRNA MGP_129S1SvImJ_T0006073.1 MGP_129S1SvImJ_G0005085.1 mouse_genomes_project 1 198254399 198256066 + D730003I15Rik lincRNA lincRNA MGP_129S1SvImJ_T0018762.1 MGP_129S1SvImJ_G0015813.1 mouse_genomes_project 1 1898278 1937785 + MGP_129S1SvImJ_P0018762 Tcea1 protein_coding protein_coding MGP_129S1SvImJ_T0018763.1 MGP_129S1SvImJ_G0015813.1 mouse_genomes_project 1 1898502 1937789 + MGP_129S1SvImJ_P0018763 Tcea1 protein_coding protein_coding MGP_129S1SvImJ_T0020296.1 MGP_129S1SvImJ_G0016109.1 mouse_genomes_project 1 65387211 65406992 + Pikfyve protein_coding retained_intron MGP_129S1SvImJ_T0020297.1 MGP_129S1SvImJ_G0016109.1 mouse_genomes_project 1 65387217 65449291 + MGP_129S1SvImJ_P0020297 Pikfyve protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020298.1 MGP_129S1SvImJ_G0016109.1 mouse_genomes_project 1 65387221 65427402 + Pikfyve protein_coding retained_intron MGP_129S1SvImJ_T0020299.1 MGP_129S1SvImJ_G0016109.1 mouse_genomes_project 1 65387222 65393785 + Pikfyve protein_coding retained_intron MGP_129S1SvImJ_T0020300.1 MGP_129S1SvImJ_G0016109.1 mouse_genomes_project 1 65387224 65407460 + Pikfyve protein_coding processed_transcript MGP_129S1SvImJ_T0020301.1 MGP_129S1SvImJ_G0016109.1 mouse_genomes_project 1 65387230 65484448 + MGP_129S1SvImJ_P0020301 Pikfyve protein_coding protein_coding MGP_129S1SvImJ_T0020302.1 MGP_129S1SvImJ_G0016109.1 mouse_genomes_project 1 65387232 65434545 + Pikfyve protein_coding retained_intron MGP_129S1SvImJ_T0020303.1 MGP_129S1SvImJ_G0016109.1 mouse_genomes_project 1 65387241 65393489 + MGP_129S1SvImJ_P0020303 Pikfyve protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020304.1 MGP_129S1SvImJ_G0016109.1 mouse_genomes_project 1 65387278 65479765 + MGP_129S1SvImJ_P0020304 Pikfyve protein_coding protein_coding MGP_129S1SvImJ_T0020305.1 MGP_129S1SvImJ_G0016109.1 mouse_genomes_project 1 65398061 65417548 + Pikfyve protein_coding retained_intron MGP_129S1SvImJ_T0023595.1 MGP_129S1SvImJ_G0016787.1 mouse_genomes_project 1 178238756 178246291 + MGP_129S1SvImJ_P0023595 Pigm protein_coding protein_coding MGP_129S1SvImJ_T0022129.1 MGP_129S1SvImJ_G0016482.1 mouse_genomes_project 1 136845417 136860100 + MGP_129S1SvImJ_P0022129 Golt1a protein_coding protein_coding MGP_129S1SvImJ_T0022134.1 MGP_129S1SvImJ_G0016482.1 mouse_genomes_project 1 136845507 136858124 + MGP_129S1SvImJ_P0022134 Golt1a protein_coding protein_coding MGP_129S1SvImJ_T0021641.1 MGP_129S1SvImJ_G0016378.1 mouse_genomes_project 1 109364656 109370274 - MGP_129S1SvImJ_P0021641 Serpinb3b protein_coding protein_coding MGP_129S1SvImJ_T0021642.1 MGP_129S1SvImJ_G0016378.1 mouse_genomes_project 1 109364677 109493887 - MGP_129S1SvImJ_P0021642 Serpinb3b protein_coding protein_coding MGP_129S1SvImJ_T0012106.1 MGP_129S1SvImJ_G0010195.1 mouse_genomes_project 1 69725084 69725835 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102102.1 MGP_129S1SvImJ_G0039937.1 mouse_genomes_project 1 180449890 180450989 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0005713.1 MGP_129S1SvImJ_G0004809.1 mouse_genomes_project 1 40004532 40018175 - 4930448I06Rik lincRNA lincRNA MGP_129S1SvImJ_T0021096.1 MGP_129S1SvImJ_G0016258.1 mouse_genomes_project 1 88519270 88524363 + MGP_129S1SvImJ_P0021096 Prss56 protein_coding protein_coding MGP_129S1SvImJ_T0000497.1 MGP_129S1SvImJ_G0000436.1 mouse_genomes_project 1 53826793 53829497 - TEC TEC MGP_129S1SvImJ_T0002872.1 MGP_129S1SvImJ_G0002717.1 mouse_genomes_project 1 93355455 93359880 - Gm29100 antisense antisense MGP_129S1SvImJ_T0023735.1 MGP_129S1SvImJ_G0016842.1 mouse_genomes_project 1 182017874 182019771 + MGP_129S1SvImJ_P0023735 Gm38100 protein_coding protein_coding MGP_129S1SvImJ_T0023736.1 MGP_129S1SvImJ_G0016842.1 mouse_genomes_project 1 182017915 182019244 + MGP_129S1SvImJ_P0023736 Gm38100 protein_coding protein_coding MGP_129S1SvImJ_T0012137.1 MGP_129S1SvImJ_G0010226.1 mouse_genomes_project 1 84184867 84185708 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005940.1 MGP_129S1SvImJ_G0004982.1 mouse_genomes_project 1 140558754 140598268 + Platr22 lincRNA lincRNA MGP_129S1SvImJ_T0009571.1 MGP_129S1SvImJ_G0007687.1 mouse_genomes_project 1 187021901 187021968 + Mir6904 miRNA miRNA MGP_129S1SvImJ_T0100382.1 MGP_129S1SvImJ_G0038449.1 mouse_genomes_project 1 165146670 165146780 - Gm24719 snoRNA snoRNA MGP_129S1SvImJ_T0000790.1 MGP_129S1SvImJ_G0000726.1 mouse_genomes_project 1 186802173 186805244 + TEC TEC MGP_129S1SvImJ_T0009550.1 MGP_129S1SvImJ_G0007666.1 mouse_genomes_project 1 154698827 154698939 - Gm44329 miRNA miRNA MGP_129S1SvImJ_T0021616.1 MGP_129S1SvImJ_G0016370.1 mouse_genomes_project 1 108319319 108551281 + MGP_129S1SvImJ_P0021616 Phlpp1 protein_coding protein_coding MGP_129S1SvImJ_T0021617.1 MGP_129S1SvImJ_G0016370.1 mouse_genomes_project 1 108435617 108441614 + Phlpp1 protein_coding retained_intron MGP_129S1SvImJ_T0021618.1 MGP_129S1SvImJ_G0016370.1 mouse_genomes_project 1 108464322 108466124 + Phlpp1 protein_coding processed_transcript MGP_129S1SvImJ_T0024261.1 MGP_129S1SvImJ_G0016950.1 mouse_genomes_project 1 199051671 199063950 + MGP_129S1SvImJ_P0024261 Rd3 protein_coding protein_coding MGP_129S1SvImJ_T0024262.1 MGP_129S1SvImJ_G0016950.1 mouse_genomes_project 1 199051674 199062061 + MGP_129S1SvImJ_P0024262 Rd3 protein_coding protein_coding MGP_129S1SvImJ_T0024263.1 MGP_129S1SvImJ_G0016950.1 mouse_genomes_project 1 199052533 199062060 + MGP_129S1SvImJ_P0024263 Rd3 protein_coding protein_coding MGP_129S1SvImJ_T0024264.1 MGP_129S1SvImJ_G0016950.1 mouse_genomes_project 1 199058446 199062061 + Rd3 protein_coding retained_intron MGP_129S1SvImJ_T0020714.1 MGP_129S1SvImJ_G0016182.1 mouse_genomes_project 1 75811103 75828174 - MGP_129S1SvImJ_P0020714 Ptprn protein_coding protein_coding MGP_129S1SvImJ_T0020715.1 MGP_129S1SvImJ_G0016182.1 mouse_genomes_project 1 75820818 75821958 - Ptprn protein_coding retained_intron MGP_129S1SvImJ_T0020716.1 MGP_129S1SvImJ_G0016182.1 mouse_genomes_project 1 75822451 75827868 - MGP_129S1SvImJ_P0020716 Ptprn protein_coding protein_coding MGP_129S1SvImJ_T0020717.1 MGP_129S1SvImJ_G0016182.1 mouse_genomes_project 1 75822451 75828011 - MGP_129S1SvImJ_P0020717 Ptprn protein_coding protein_coding MGP_129S1SvImJ_T0020718.1 MGP_129S1SvImJ_G0016182.1 mouse_genomes_project 1 75822519 75828463 - MGP_129S1SvImJ_P0020718 Ptprn protein_coding protein_coding MGP_129S1SvImJ_T0020719.1 MGP_129S1SvImJ_G0016182.1 mouse_genomes_project 1 75822543 75828169 - Ptprn protein_coding processed_transcript MGP_129S1SvImJ_T0011879.1 MGP_129S1SvImJ_G0009968.1 mouse_genomes_project 1 2794795 2795189 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018985.1 MGP_129S1SvImJ_G0015851.1 mouse_genomes_project 1 13328286 13361697 - MGP_129S1SvImJ_P0018985 Sbspon protein_coding protein_coding MGP_129S1SvImJ_T0099099.1 MGP_129S1SvImJ_G0037166.1 mouse_genomes_project 1 94983408 94983511 + Gm26446 snRNA snRNA MGP_129S1SvImJ_T0012368.1 MGP_129S1SvImJ_G0010457.1 mouse_genomes_project 1 187585219 187586356 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023440.1 MGP_129S1SvImJ_G0016753.1 mouse_genomes_project 1 177069133 177075178 - MGP_129S1SvImJ_P0023440 Usp21 protein_coding protein_coding MGP_129S1SvImJ_T0023441.1 MGP_129S1SvImJ_G0016753.1 mouse_genomes_project 1 177069137 177075111 - MGP_129S1SvImJ_P0023441 Usp21 protein_coding protein_coding MGP_129S1SvImJ_T0023442.1 MGP_129S1SvImJ_G0016753.1 mouse_genomes_project 1 177069146 177070104 - Usp21 protein_coding retained_intron MGP_129S1SvImJ_T0023443.1 MGP_129S1SvImJ_G0016753.1 mouse_genomes_project 1 177069146 177075142 - MGP_129S1SvImJ_P0023443 Usp21 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023444.1 MGP_129S1SvImJ_G0016753.1 mouse_genomes_project 1 177069146 177075148 - MGP_129S1SvImJ_P0023444 Usp21 protein_coding protein_coding MGP_129S1SvImJ_T0023445.1 MGP_129S1SvImJ_G0016753.1 mouse_genomes_project 1 177069490 177070364 - Usp21 protein_coding retained_intron MGP_129S1SvImJ_T0023446.1 MGP_129S1SvImJ_G0016753.1 mouse_genomes_project 1 177069996 177071774 - Usp21 protein_coding retained_intron MGP_129S1SvImJ_T0023447.1 MGP_129S1SvImJ_G0016753.1 mouse_genomes_project 1 177070228 177071182 - Usp21 protein_coding retained_intron MGP_129S1SvImJ_T0023448.1 MGP_129S1SvImJ_G0016753.1 mouse_genomes_project 1 177070602 177072801 - Usp21 protein_coding retained_intron MGP_129S1SvImJ_T0023449.1 MGP_129S1SvImJ_G0016753.1 mouse_genomes_project 1 177070715 177074137 - Usp21 protein_coding retained_intron MGP_129S1SvImJ_T0023450.1 MGP_129S1SvImJ_G0016753.1 mouse_genomes_project 1 177071649 177075146 - Usp21 protein_coding retained_intron MGP_129S1SvImJ_T0023451.1 MGP_129S1SvImJ_G0016753.1 mouse_genomes_project 1 177072118 177073993 - MGP_129S1SvImJ_P0023451 Usp21 protein_coding protein_coding MGP_129S1SvImJ_T0020470.1 MGP_129S1SvImJ_G0016140.1 mouse_genomes_project 1 74707520 74732058 + MGP_129S1SvImJ_P0020470 Rufy4 protein_coding protein_coding MGP_129S1SvImJ_T0020471.1 MGP_129S1SvImJ_G0016140.1 mouse_genomes_project 1 74707558 74731608 + MGP_129S1SvImJ_P0020471 Rufy4 protein_coding protein_coding MGP_129S1SvImJ_T0012170.1 MGP_129S1SvImJ_G0010259.1 mouse_genomes_project 1 102507132 102507685 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021778.1 MGP_129S1SvImJ_G0016409.1 mouse_genomes_project 1 124122319 124151932 - MGP_129S1SvImJ_P0021778 Insig2 protein_coding protein_coding MGP_129S1SvImJ_T0021779.1 MGP_129S1SvImJ_G0016409.1 mouse_genomes_project 1 124123871 124125295 - Insig2 protein_coding retained_intron MGP_129S1SvImJ_T0021780.1 MGP_129S1SvImJ_G0016409.1 mouse_genomes_project 1 124123902 124146819 - MGP_129S1SvImJ_P0021780 Insig2 protein_coding protein_coding MGP_129S1SvImJ_T0021781.1 MGP_129S1SvImJ_G0016409.1 mouse_genomes_project 1 124124856 124131398 - Insig2 protein_coding retained_intron MGP_129S1SvImJ_T0021782.1 MGP_129S1SvImJ_G0016409.1 mouse_genomes_project 1 124124913 124146791 - MGP_129S1SvImJ_P0021782 Insig2 protein_coding protein_coding MGP_129S1SvImJ_T0021783.1 MGP_129S1SvImJ_G0016409.1 mouse_genomes_project 1 124125213 124142195 - MGP_129S1SvImJ_P0021783 Insig2 protein_coding protein_coding MGP_129S1SvImJ_T0021784.1 MGP_129S1SvImJ_G0016409.1 mouse_genomes_project 1 124130829 124138732 - Insig2 protein_coding retained_intron MGP_129S1SvImJ_T0021785.1 MGP_129S1SvImJ_G0016409.1 mouse_genomes_project 1 124138667 124146708 - MGP_129S1SvImJ_P0021785 Insig2 protein_coding protein_coding MGP_129S1SvImJ_T0021786.1 MGP_129S1SvImJ_G0016409.1 mouse_genomes_project 1 124138737 124146714 - MGP_129S1SvImJ_P0021786 Insig2 protein_coding protein_coding MGP_129S1SvImJ_T0021787.1 MGP_129S1SvImJ_G0016409.1 mouse_genomes_project 1 124138764 124151589 - MGP_129S1SvImJ_P0021787 Insig2 protein_coding protein_coding MGP_129S1SvImJ_T0000741.1 MGP_129S1SvImJ_G0000678.1 mouse_genomes_project 1 165991304 165995321 + TEC TEC MGP_129S1SvImJ_T0005661.1 MGP_129S1SvImJ_G0004768.1 mouse_genomes_project 1 1609784 1612908 - Gm37323 lincRNA lincRNA MGP_129S1SvImJ_T0019101.1 MGP_129S1SvImJ_G0015882.1 mouse_genomes_project 1 20024268 20557947 - MGP_129S1SvImJ_P0019101 protein_coding protein_coding MGP_129S1SvImJ_T0019102.1 MGP_129S1SvImJ_G0015882.1 mouse_genomes_project 1 20024268 20557947 - MGP_129S1SvImJ_P0019102 protein_coding protein_coding MGP_129S1SvImJ_T0019103.1 MGP_129S1SvImJ_G0015882.1 mouse_genomes_project 1 20024268 20557947 - MGP_129S1SvImJ_P0019103 protein_coding protein_coding MGP_129S1SvImJ_T0019104.1 MGP_129S1SvImJ_G0015882.1 mouse_genomes_project 1 20024268 20557947 - MGP_129S1SvImJ_P0019104 protein_coding protein_coding MGP_129S1SvImJ_T0019105.1 MGP_129S1SvImJ_G0015882.1 mouse_genomes_project 1 20024268 20557947 - MGP_129S1SvImJ_P0019105 protein_coding protein_coding MGP_129S1SvImJ_T0019106.1 MGP_129S1SvImJ_G0015882.1 mouse_genomes_project 1 20024932 20054837 - MGP_129S1SvImJ_P0019106 protein_coding protein_coding MGP_129S1SvImJ_T0019107.1 MGP_129S1SvImJ_G0015882.1 mouse_genomes_project 1 20026439 20557947 - MGP_129S1SvImJ_P0019107 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0019108.1 MGP_129S1SvImJ_G0015882.1 mouse_genomes_project 1 20026439 20183879 - MGP_129S1SvImJ_P0019108 protein_coding protein_coding MGP_129S1SvImJ_T0019109.1 MGP_129S1SvImJ_G0015882.1 mouse_genomes_project 1 20187971 20557947 - MGP_129S1SvImJ_P0019109 protein_coding protein_coding MGP_129S1SvImJ_T0005917.1 MGP_129S1SvImJ_G0004962.1 mouse_genomes_project 1 133593290 133606298 - Gm16081 lincRNA lincRNA MGP_129S1SvImJ_T0009496.1 MGP_129S1SvImJ_G0007612.1 mouse_genomes_project 1 42955196 42955306 - Gm24180 miRNA miRNA MGP_129S1SvImJ_T0000537.1 MGP_129S1SvImJ_G0000476.1 mouse_genomes_project 1 69073378 69076652 - TEC TEC MGP_129S1SvImJ_T0020194.1 MGP_129S1SvImJ_G0016085.1 mouse_genomes_project 1 63283108 63284474 - Ndufs1 protein_coding retained_intron MGP_129S1SvImJ_T0020195.1 MGP_129S1SvImJ_G0016085.1 mouse_genomes_project 1 63283108 63319556 - MGP_129S1SvImJ_P0020195 Ndufs1 protein_coding protein_coding MGP_129S1SvImJ_T0020196.1 MGP_129S1SvImJ_G0016085.1 mouse_genomes_project 1 63283116 63287231 - Ndufs1 protein_coding retained_intron MGP_129S1SvImJ_T0020197.1 MGP_129S1SvImJ_G0016085.1 mouse_genomes_project 1 63283201 63286899 - MGP_129S1SvImJ_P0020197 Ndufs1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020198.1 MGP_129S1SvImJ_G0016085.1 mouse_genomes_project 1 63283247 63319466 - MGP_129S1SvImJ_P0020198 Ndufs1 protein_coding protein_coding MGP_129S1SvImJ_T0020199.1 MGP_129S1SvImJ_G0016085.1 mouse_genomes_project 1 63289550 63319397 - MGP_129S1SvImJ_P0020199 Ndufs1 protein_coding protein_coding MGP_129S1SvImJ_T0020200.1 MGP_129S1SvImJ_G0016085.1 mouse_genomes_project 1 63289712 63292322 - Ndufs1 protein_coding retained_intron MGP_129S1SvImJ_T0020201.1 MGP_129S1SvImJ_G0016085.1 mouse_genomes_project 1 63296162 63319403 - Ndufs1 protein_coding retained_intron MGP_129S1SvImJ_T0020202.1 MGP_129S1SvImJ_G0016085.1 mouse_genomes_project 1 63299290 63319401 - Ndufs1 protein_coding retained_intron MGP_129S1SvImJ_T0020203.1 MGP_129S1SvImJ_G0016085.1 mouse_genomes_project 1 63304215 63319424 - MGP_129S1SvImJ_P0020203 Ndufs1 protein_coding protein_coding MGP_129S1SvImJ_T0020204.1 MGP_129S1SvImJ_G0016085.1 mouse_genomes_project 1 63305451 63319400 - MGP_129S1SvImJ_P0020204 Ndufs1 protein_coding protein_coding MGP_129S1SvImJ_T0020205.1 MGP_129S1SvImJ_G0016085.1 mouse_genomes_project 1 63309560 63319527 - MGP_129S1SvImJ_P0020205 Ndufs1 protein_coding protein_coding MGP_129S1SvImJ_T0020206.1 MGP_129S1SvImJ_G0016085.1 mouse_genomes_project 1 63312335 63319567 - MGP_129S1SvImJ_P0020206 Ndufs1 protein_coding protein_coding MGP_129S1SvImJ_T0002855.1 MGP_129S1SvImJ_G0002701.1 mouse_genomes_project 1 75385835 75388294 - Gm29539 antisense antisense MGP_129S1SvImJ_T0021440.1 MGP_129S1SvImJ_G0016334.1 mouse_genomes_project 1 94745068 94755247 + MGP_129S1SvImJ_P0021440 Agxt protein_coding protein_coding MGP_129S1SvImJ_T0021441.1 MGP_129S1SvImJ_G0016334.1 mouse_genomes_project 1 94745396 94747833 + Agxt protein_coding retained_intron MGP_129S1SvImJ_T0021442.1 MGP_129S1SvImJ_G0016334.1 mouse_genomes_project 1 94749704 94755243 + Agxt protein_coding processed_transcript MGP_129S1SvImJ_T0012001.1 MGP_129S1SvImJ_G0010090.1 mouse_genomes_project 1 42238933 42239386 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012131.1 MGP_129S1SvImJ_G0010220.1 mouse_genomes_project 1 83698124 83698307 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000776.1 MGP_129S1SvImJ_G0000713.1 mouse_genomes_project 1 183191759 183193724 - TEC TEC MGP_129S1SvImJ_T0023630.1 MGP_129S1SvImJ_G0016795.1 mouse_genomes_project 1 178509483 178511661 - MGP_129S1SvImJ_P0023630 Dusp23 protein_coding protein_coding MGP_129S1SvImJ_T0018838.1 MGP_129S1SvImJ_G0015826.1 mouse_genomes_project 1 6902738 6936276 - MGP_129S1SvImJ_P0018838 Mybl1 protein_coding protein_coding MGP_129S1SvImJ_T0018839.1 MGP_129S1SvImJ_G0015826.1 mouse_genomes_project 1 6904901 6936091 - MGP_129S1SvImJ_P0018839 Mybl1 protein_coding protein_coding MGP_129S1SvImJ_T0018840.1 MGP_129S1SvImJ_G0015826.1 mouse_genomes_project 1 6911490 6913969 - Mybl1 protein_coding retained_intron MGP_129S1SvImJ_T0018841.1 MGP_129S1SvImJ_G0015826.1 mouse_genomes_project 1 6913630 6918811 - Mybl1 protein_coding retained_intron MGP_129S1SvImJ_T0018842.1 MGP_129S1SvImJ_G0015826.1 mouse_genomes_project 1 6917221 6935721 - MGP_129S1SvImJ_P0018842 Mybl1 protein_coding protein_coding MGP_129S1SvImJ_T0024061.1 MGP_129S1SvImJ_G0016910.1 mouse_genomes_project 1 191506209 191543869 - MGP_129S1SvImJ_P0024061 Marc2 protein_coding protein_coding MGP_129S1SvImJ_T0024062.1 MGP_129S1SvImJ_G0016910.1 mouse_genomes_project 1 191506819 191525469 - Marc2 protein_coding processed_transcript MGP_129S1SvImJ_T0024063.1 MGP_129S1SvImJ_G0016910.1 mouse_genomes_project 1 191506823 191520064 - Marc2 protein_coding retained_intron MGP_129S1SvImJ_T0024064.1 MGP_129S1SvImJ_G0016910.1 mouse_genomes_project 1 191506833 191525254 - Marc2 protein_coding processed_transcript MGP_129S1SvImJ_T0024065.1 MGP_129S1SvImJ_G0016910.1 mouse_genomes_project 1 191506835 191512782 - Marc2 protein_coding retained_intron MGP_129S1SvImJ_T0024066.1 MGP_129S1SvImJ_G0016910.1 mouse_genomes_project 1 191506901 191525244 - Marc2 protein_coding processed_transcript MGP_129S1SvImJ_T0024067.1 MGP_129S1SvImJ_G0016910.1 mouse_genomes_project 1 191512574 191543796 - Marc2 protein_coding processed_transcript MGP_129S1SvImJ_T0024068.1 MGP_129S1SvImJ_G0016910.1 mouse_genomes_project 1 191517556 191544439 - MGP_129S1SvImJ_P0024068 Marc2 protein_coding protein_coding MGP_129S1SvImJ_T0024069.1 MGP_129S1SvImJ_G0016910.1 mouse_genomes_project 1 191525771 191543559 - Marc2 protein_coding processed_transcript MGP_129S1SvImJ_T0024070.1 MGP_129S1SvImJ_G0016910.1 mouse_genomes_project 1 191526926 191543835 - Marc2 protein_coding retained_intron MGP_129S1SvImJ_T0000780.1 MGP_129S1SvImJ_G0000717.1 mouse_genomes_project 1 183329462 183332227 - TEC TEC MGP_129S1SvImJ_T0009534.1 MGP_129S1SvImJ_G0007650.1 mouse_genomes_project 1 100336734 100336844 + Gm26134 miRNA miRNA MGP_129S1SvImJ_T0022149.1 MGP_129S1SvImJ_G0016488.1 mouse_genomes_project 1 137196496 137203124 - MGP_129S1SvImJ_P0022149 Snrpe protein_coding protein_coding MGP_129S1SvImJ_T0022150.1 MGP_129S1SvImJ_G0016488.1 mouse_genomes_project 1 137196742 137202895 - MGP_129S1SvImJ_P0022150 Snrpe protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022151.1 MGP_129S1SvImJ_G0016488.1 mouse_genomes_project 1 137198936 137203097 - MGP_129S1SvImJ_P0022151 Snrpe protein_coding protein_coding MGP_129S1SvImJ_T0022152.1 MGP_129S1SvImJ_G0016488.1 mouse_genomes_project 1 137199372 137202773 - MGP_129S1SvImJ_P0022152 Snrpe protein_coding protein_coding MGP_129S1SvImJ_T0022153.1 MGP_129S1SvImJ_G0016488.1 mouse_genomes_project 1 137201712 137203063 - MGP_129S1SvImJ_P0022153 Snrpe protein_coding protein_coding MGP_129S1SvImJ_T0098423.1 MGP_129S1SvImJ_G0036508.1 mouse_genomes_project 1 138887265 138887366 - Gm26280 rRNA rRNA MGP_129S1SvImJ_T0022774.1 MGP_129S1SvImJ_G0016617.1 mouse_genomes_project 1 160786867 160927211 - MGP_129S1SvImJ_P0022774 Cep350 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0022775.1 MGP_129S1SvImJ_G0016617.1 mouse_genomes_project 1 160786873 160927503 - MGP_129S1SvImJ_P0022775 Cep350 protein_coding protein_coding MGP_129S1SvImJ_T0022776.1 MGP_129S1SvImJ_G0016617.1 mouse_genomes_project 1 160790450 160803286 - Cep350 protein_coding processed_transcript MGP_129S1SvImJ_T0022777.1 MGP_129S1SvImJ_G0016617.1 mouse_genomes_project 1 160805240 160832173 - Cep350 protein_coding processed_transcript MGP_129S1SvImJ_T0022778.1 MGP_129S1SvImJ_G0016617.1 mouse_genomes_project 1 160810635 160830962 - Cep350 protein_coding processed_transcript MGP_129S1SvImJ_T0022779.1 MGP_129S1SvImJ_G0016617.1 mouse_genomes_project 1 160888564 160927138 - MGP_129S1SvImJ_P0022779 Cep350 protein_coding protein_coding MGP_129S1SvImJ_T0022780.1 MGP_129S1SvImJ_G0016617.1 mouse_genomes_project 1 160924225 160927432 - Cep350 protein_coding retained_intron MGP_129S1SvImJ_T0000559.1 MGP_129S1SvImJ_G0000498.1 mouse_genomes_project 1 81581872 81583705 - TEC TEC MGP_129S1SvImJ_T0005950.1 MGP_129S1SvImJ_G0004990.1 mouse_genomes_project 1 143472936 143478562 + Gm34816 lincRNA lincRNA MGP_129S1SvImJ_T0021153.1 MGP_129S1SvImJ_G0016268.1 mouse_genomes_project 1 88989927 89004928 + Inpp5d protein_coding retained_intron MGP_129S1SvImJ_T0021154.1 MGP_129S1SvImJ_G0016268.1 mouse_genomes_project 1 88989933 89095533 + MGP_129S1SvImJ_P0021154 Inpp5d protein_coding protein_coding MGP_129S1SvImJ_T0021155.1 MGP_129S1SvImJ_G0016268.1 mouse_genomes_project 1 88989960 89014633 + Inpp5d protein_coding processed_transcript MGP_129S1SvImJ_T0021156.1 MGP_129S1SvImJ_G0016268.1 mouse_genomes_project 1 88989969 89095533 + MGP_129S1SvImJ_P0021156 Inpp5d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021157.1 MGP_129S1SvImJ_G0016268.1 mouse_genomes_project 1 88989970 89094724 + MGP_129S1SvImJ_P0021157 Inpp5d protein_coding protein_coding MGP_129S1SvImJ_T0021158.1 MGP_129S1SvImJ_G0016268.1 mouse_genomes_project 1 88990060 89095540 + MGP_129S1SvImJ_P0021158 Inpp5d protein_coding protein_coding MGP_129S1SvImJ_T0021159.1 MGP_129S1SvImJ_G0016268.1 mouse_genomes_project 1 88990198 89037595 + MGP_129S1SvImJ_P0021159 Inpp5d protein_coding protein_coding MGP_129S1SvImJ_T0021160.1 MGP_129S1SvImJ_G0016268.1 mouse_genomes_project 1 88991247 89037519 + MGP_129S1SvImJ_P0021160 Inpp5d protein_coding protein_coding MGP_129S1SvImJ_T0021161.1 MGP_129S1SvImJ_G0016268.1 mouse_genomes_project 1 89084407 89087180 + Inpp5d protein_coding processed_transcript MGP_129S1SvImJ_T0012217.1 MGP_129S1SvImJ_G0010306.1 mouse_genomes_project 1 120030892 120032168 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023801.1 MGP_129S1SvImJ_G0016857.1 mouse_genomes_project 1 184838374 185029266 + Kif26b protein_coding retained_intron MGP_129S1SvImJ_T0023802.1 MGP_129S1SvImJ_G0016857.1 mouse_genomes_project 1 184838374 185268424 + MGP_129S1SvImJ_P0023802 Kif26b protein_coding protein_coding MGP_129S1SvImJ_T0023803.1 MGP_129S1SvImJ_G0016857.1 mouse_genomes_project 1 185117861 185262080 + MGP_129S1SvImJ_P0023803 Kif26b protein_coding protein_coding MGP_129S1SvImJ_T0019999.1 MGP_129S1SvImJ_G0016053.1 mouse_genomes_project 1 58331507 58380644 - MGP_129S1SvImJ_P0019999 Orc2 protein_coding protein_coding MGP_129S1SvImJ_T0020000.1 MGP_129S1SvImJ_G0016053.1 mouse_genomes_project 1 58332940 58376941 - MGP_129S1SvImJ_P0020000 Orc2 protein_coding protein_coding MGP_129S1SvImJ_T0020001.1 MGP_129S1SvImJ_G0016053.1 mouse_genomes_project 1 58351969 58353108 - Orc2 protein_coding retained_intron MGP_129S1SvImJ_T0020002.1 MGP_129S1SvImJ_G0016053.1 mouse_genomes_project 1 58355866 58380460 - MGP_129S1SvImJ_P0020002 Orc2 protein_coding protein_coding MGP_129S1SvImJ_T0020003.1 MGP_129S1SvImJ_G0016053.1 mouse_genomes_project 1 58375916 58380490 - MGP_129S1SvImJ_P0020003 Orc2 protein_coding protein_coding MGP_129S1SvImJ_T0021464.1 MGP_129S1SvImJ_G0016340.1 mouse_genomes_project 1 94961803 94994886 + MGP_129S1SvImJ_P0021464 Ppp1r7 protein_coding protein_coding MGP_129S1SvImJ_T0021465.1 MGP_129S1SvImJ_G0016340.1 mouse_genomes_project 1 94962604 94971575 + MGP_129S1SvImJ_P0021465 Ppp1r7 protein_coding protein_coding MGP_129S1SvImJ_T0021466.1 MGP_129S1SvImJ_G0016340.1 mouse_genomes_project 1 94962656 94971506 + MGP_129S1SvImJ_P0021466 Ppp1r7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020849.1 MGP_129S1SvImJ_G0016204.1 mouse_genomes_project 1 80207559 80213012 - MGP_129S1SvImJ_P0020849 Scg2 protein_coding protein_coding MGP_129S1SvImJ_T0020850.1 MGP_129S1SvImJ_G0016204.1 mouse_genomes_project 1 80207559 80212934 - MGP_129S1SvImJ_P0020850 Scg2 protein_coding protein_coding MGP_129S1SvImJ_T0099060.1 MGP_129S1SvImJ_G0037127.1 mouse_genomes_project 1 6671386 6671489 + Gm24765 snRNA snRNA MGP_129S1SvImJ_T0022443.1 MGP_129S1SvImJ_G0016550.1 mouse_genomes_project 1 143004021 143114602 + MGP_129S1SvImJ_P0022443 Dennd1b protein_coding protein_coding MGP_129S1SvImJ_T0022444.1 MGP_129S1SvImJ_G0016550.1 mouse_genomes_project 1 143004295 143226650 + MGP_129S1SvImJ_P0022444 Dennd1b protein_coding protein_coding MGP_129S1SvImJ_T0022445.1 MGP_129S1SvImJ_G0016550.1 mouse_genomes_project 1 143005710 143229555 + MGP_129S1SvImJ_P0022445 Dennd1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022446.1 MGP_129S1SvImJ_G0016550.1 mouse_genomes_project 1 143009531 143226650 + MGP_129S1SvImJ_P0022446 Dennd1b protein_coding protein_coding MGP_129S1SvImJ_T0022447.1 MGP_129S1SvImJ_G0016550.1 mouse_genomes_project 1 143105204 143108000 + Dennd1b protein_coding retained_intron MGP_129S1SvImJ_T0022448.1 MGP_129S1SvImJ_G0016550.1 mouse_genomes_project 1 143137443 143183048 + Dennd1b protein_coding retained_intron MGP_129S1SvImJ_T0022449.1 MGP_129S1SvImJ_G0016550.1 mouse_genomes_project 1 143172809 143226590 + Dennd1b protein_coding processed_transcript MGP_129S1SvImJ_T0022450.1 MGP_129S1SvImJ_G0016550.1 mouse_genomes_project 1 143180403 143224701 + Dennd1b protein_coding processed_transcript MGP_129S1SvImJ_T0021162.1 MGP_129S1SvImJ_G0016269.1 mouse_genomes_project 1 89125303 89143758 + MGP_129S1SvImJ_P0021162 Atg16l1 protein_coding protein_coding MGP_129S1SvImJ_T0021163.1 MGP_129S1SvImJ_G0016269.1 mouse_genomes_project 1 89125446 89165048 + MGP_129S1SvImJ_P0021163 Atg16l1 protein_coding protein_coding MGP_129S1SvImJ_T0021164.1 MGP_129S1SvImJ_G0016269.1 mouse_genomes_project 1 89125489 89141772 + Atg16l1 protein_coding retained_intron MGP_129S1SvImJ_T0021165.1 MGP_129S1SvImJ_G0016269.1 mouse_genomes_project 1 89125509 89158820 + Atg16l1 protein_coding retained_intron MGP_129S1SvImJ_T0021166.1 MGP_129S1SvImJ_G0016269.1 mouse_genomes_project 1 89125509 89165042 + MGP_129S1SvImJ_P0021166 Atg16l1 protein_coding protein_coding MGP_129S1SvImJ_T0021167.1 MGP_129S1SvImJ_G0016269.1 mouse_genomes_project 1 89125519 89165045 + MGP_129S1SvImJ_P0021167 Atg16l1 protein_coding protein_coding MGP_129S1SvImJ_T0021168.1 MGP_129S1SvImJ_G0016269.1 mouse_genomes_project 1 89125521 89165045 + Atg16l1 protein_coding retained_intron MGP_129S1SvImJ_T0021169.1 MGP_129S1SvImJ_G0016269.1 mouse_genomes_project 1 89125526 89140398 + Atg16l1 protein_coding retained_intron MGP_129S1SvImJ_T0021170.1 MGP_129S1SvImJ_G0016269.1 mouse_genomes_project 1 89139315 89147780 + Atg16l1 protein_coding retained_intron MGP_129S1SvImJ_T0021171.1 MGP_129S1SvImJ_G0016269.1 mouse_genomes_project 1 89148202 89151600 + Atg16l1 protein_coding retained_intron MGP_129S1SvImJ_T0021172.1 MGP_129S1SvImJ_G0016269.1 mouse_genomes_project 1 89151099 89161182 + Atg16l1 protein_coding retained_intron MGP_129S1SvImJ_T0000685.1 MGP_129S1SvImJ_G0000622.1 mouse_genomes_project 1 143076025 143078822 + TEC TEC MGP_129S1SvImJ_T0009525.1 MGP_129S1SvImJ_G0007641.1 mouse_genomes_project 1 87606066 87606213 - Mir3535 miRNA miRNA MGP_129S1SvImJ_T0000691.1 MGP_129S1SvImJ_G0000628.1 mouse_genomes_project 1 145632675 145635785 - TEC TEC MGP_129S1SvImJ_T0012012.1 MGP_129S1SvImJ_G0010101.1 mouse_genomes_project 1 43902676 43903343 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000469.1 MGP_129S1SvImJ_G0000408.1 mouse_genomes_project 1 33257397 33260429 + TEC TEC MGP_129S1SvImJ_T0021814.1 MGP_129S1SvImJ_G0016415.1 mouse_genomes_project 1 128655747 128664797 + MGP_129S1SvImJ_P0021814 Slc35f5 protein_coding protein_coding MGP_129S1SvImJ_T0021815.1 MGP_129S1SvImJ_G0016415.1 mouse_genomes_project 1 128656168 128692204 + MGP_129S1SvImJ_P0021815 Slc35f5 protein_coding protein_coding MGP_129S1SvImJ_T0021816.1 MGP_129S1SvImJ_G0016415.1 mouse_genomes_project 1 128680896 128691532 + MGP_129S1SvImJ_P0021816 Slc35f5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020135.1 MGP_129S1SvImJ_G0016075.1 mouse_genomes_project 1 60248211 60410676 + MGP_129S1SvImJ_P0020135 Nbeal1 protein_coding protein_coding MGP_129S1SvImJ_T0020136.1 MGP_129S1SvImJ_G0016075.1 mouse_genomes_project 1 60248424 60253511 + Nbeal1 protein_coding retained_intron MGP_129S1SvImJ_T0020137.1 MGP_129S1SvImJ_G0016075.1 mouse_genomes_project 1 60291142 60305183 + MGP_129S1SvImJ_P0020137 Nbeal1 protein_coding protein_coding MGP_129S1SvImJ_T0020138.1 MGP_129S1SvImJ_G0016075.1 mouse_genomes_project 1 60296162 60299568 + Nbeal1 protein_coding retained_intron MGP_129S1SvImJ_T0020139.1 MGP_129S1SvImJ_G0016075.1 mouse_genomes_project 1 60305085 60352784 + Nbeal1 protein_coding retained_intron MGP_129S1SvImJ_T0020140.1 MGP_129S1SvImJ_G0016075.1 mouse_genomes_project 1 60331060 60390374 + MGP_129S1SvImJ_P0020140 Nbeal1 protein_coding protein_coding MGP_129S1SvImJ_T0020141.1 MGP_129S1SvImJ_G0016075.1 mouse_genomes_project 1 60331068 60402338 + MGP_129S1SvImJ_P0020141 Nbeal1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020142.1 MGP_129S1SvImJ_G0016075.1 mouse_genomes_project 1 60336893 60340111 + Nbeal1 protein_coding retained_intron MGP_129S1SvImJ_T0020143.1 MGP_129S1SvImJ_G0016075.1 mouse_genomes_project 1 60349515 60362609 + MGP_129S1SvImJ_P0020143 Nbeal1 protein_coding protein_coding MGP_129S1SvImJ_T0020144.1 MGP_129S1SvImJ_G0016075.1 mouse_genomes_project 1 60354680 60356942 + Nbeal1 protein_coding retained_intron MGP_129S1SvImJ_T0002996.1 MGP_129S1SvImJ_G0002814.1 mouse_genomes_project 1 193771739 193775608 - Gm37912 antisense antisense MGP_129S1SvImJ_T0020441.1 MGP_129S1SvImJ_G0016134.1 mouse_genomes_project 1 73165350 73228130 - MGP_129S1SvImJ_P0020441 Ankar protein_coding protein_coding MGP_129S1SvImJ_T0018856.1 MGP_129S1SvImJ_G0015829.1 mouse_genomes_project 1 7166817 7182660 + MGP_129S1SvImJ_P0018856 Mcmdc2 protein_coding protein_coding MGP_129S1SvImJ_T0018857.1 MGP_129S1SvImJ_G0015829.1 mouse_genomes_project 1 7166817 7204670 + MGP_129S1SvImJ_P0018857 Mcmdc2 protein_coding protein_coding MGP_129S1SvImJ_T0018858.1 MGP_129S1SvImJ_G0015829.1 mouse_genomes_project 1 7166847 7203834 + MGP_129S1SvImJ_P0018858 Mcmdc2 protein_coding protein_coding MGP_129S1SvImJ_T0018859.1 MGP_129S1SvImJ_G0015829.1 mouse_genomes_project 1 7166849 7205800 + MGP_129S1SvImJ_P0018859 Mcmdc2 protein_coding protein_coding MGP_129S1SvImJ_T0018860.1 MGP_129S1SvImJ_G0015829.1 mouse_genomes_project 1 7169511 7181401 + MGP_129S1SvImJ_P0018860 Mcmdc2 protein_coding protein_coding MGP_129S1SvImJ_T0018861.1 MGP_129S1SvImJ_G0015829.1 mouse_genomes_project 1 7169896 7200377 + MGP_129S1SvImJ_P0018861 Mcmdc2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0018862.1 MGP_129S1SvImJ_G0015829.1 mouse_genomes_project 1 7195648 7204670 + MGP_129S1SvImJ_P0018862 Mcmdc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022295.1 MGP_129S1SvImJ_G0016522.1 mouse_genomes_project 1 139087641 139133063 + MGP_129S1SvImJ_P0022295 Lmod1 protein_coding protein_coding MGP_129S1SvImJ_T0000526.1 MGP_129S1SvImJ_G0000465.1 mouse_genomes_project 1 67027495 67030598 - TEC TEC MGP_129S1SvImJ_T0011957.1 MGP_129S1SvImJ_G0010046.1 mouse_genomes_project 1 26874432 26876917 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000399.1 MGP_129S1SvImJ_G0000341.1 mouse_genomes_project 1 7743769 7746514 - TEC TEC MGP_129S1SvImJ_T0020014.1 MGP_129S1SvImJ_G0016056.1 mouse_genomes_project 1 58557112 58613184 - MGP_129S1SvImJ_P0020014 Als2cr12 protein_coding protein_coding MGP_129S1SvImJ_T0020015.1 MGP_129S1SvImJ_G0016056.1 mouse_genomes_project 1 58557112 58841681 - MGP_129S1SvImJ_P0020015 Als2cr12 protein_coding protein_coding MGP_129S1SvImJ_T0020016.1 MGP_129S1SvImJ_G0016056.1 mouse_genomes_project 1 58557355 58613184 - MGP_129S1SvImJ_P0020016 Als2cr12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022911.1 MGP_129S1SvImJ_G0016638.1 mouse_genomes_project 1 164676076 165105510 + MGP_129S1SvImJ_P0022911 Tnr protein_coding protein_coding MGP_129S1SvImJ_T0022912.1 MGP_129S1SvImJ_G0016638.1 mouse_genomes_project 1 164676148 164899711 + Tnr protein_coding retained_intron MGP_129S1SvImJ_T0022913.1 MGP_129S1SvImJ_G0016638.1 mouse_genomes_project 1 164899425 165098185 + MGP_129S1SvImJ_P0022913 Tnr protein_coding protein_coding MGP_129S1SvImJ_T0022914.1 MGP_129S1SvImJ_G0016638.1 mouse_genomes_project 1 164937621 165018183 + MGP_129S1SvImJ_P0022914 Tnr protein_coding protein_coding MGP_129S1SvImJ_T0022915.1 MGP_129S1SvImJ_G0016638.1 mouse_genomes_project 1 165018237 165031501 + MGP_129S1SvImJ_P0022915 Tnr protein_coding protein_coding MGP_129S1SvImJ_T0019620.1 MGP_129S1SvImJ_G0015983.1 mouse_genomes_project 1 42970085 42986639 + Tpp2 protein_coding processed_transcript MGP_129S1SvImJ_T0019621.1 MGP_129S1SvImJ_G0015983.1 mouse_genomes_project 1 42970445 43040631 + MGP_129S1SvImJ_P0019621 Tpp2 protein_coding protein_coding MGP_129S1SvImJ_T0019622.1 MGP_129S1SvImJ_G0015983.1 mouse_genomes_project 1 42970452 42994179 + Tpp2 protein_coding retained_intron MGP_129S1SvImJ_T0019623.1 MGP_129S1SvImJ_G0015983.1 mouse_genomes_project 1 42970453 42994179 + Tpp2 protein_coding retained_intron MGP_129S1SvImJ_T0019624.1 MGP_129S1SvImJ_G0015983.1 mouse_genomes_project 1 42970453 43040660 + MGP_129S1SvImJ_P0019624 Tpp2 protein_coding protein_coding MGP_129S1SvImJ_T0019625.1 MGP_129S1SvImJ_G0015983.1 mouse_genomes_project 1 42970471 43027810 + MGP_129S1SvImJ_P0019625 Tpp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019626.1 MGP_129S1SvImJ_G0015983.1 mouse_genomes_project 1 42970483 43027791 + MGP_129S1SvImJ_P0019626 Tpp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019627.1 MGP_129S1SvImJ_G0015983.1 mouse_genomes_project 1 43008561 43014535 + MGP_129S1SvImJ_P0019627 Tpp2 protein_coding protein_coding MGP_129S1SvImJ_T0019628.1 MGP_129S1SvImJ_G0015983.1 mouse_genomes_project 1 43020474 43040660 + MGP_129S1SvImJ_P0019628 Tpp2 protein_coding protein_coding MGP_129S1SvImJ_T0019629.1 MGP_129S1SvImJ_G0015983.1 mouse_genomes_project 1 43037531 43039996 + Tpp2 protein_coding retained_intron MGP_129S1SvImJ_T0002924.1 MGP_129S1SvImJ_G0002756.1 mouse_genomes_project 1 144744748 144832873 - 4930590L20Rik antisense antisense MGP_129S1SvImJ_T0000612.1 MGP_129S1SvImJ_G0000551.1 mouse_genomes_project 1 113263876 113266629 - TEC TEC MGP_129S1SvImJ_T0024322.1 MGP_129S1SvImJ_G0016960.1 mouse_genomes_project 1 200264219 200290095 - MGP_129S1SvImJ_P0024322 Traf3ip3 protein_coding protein_coding MGP_129S1SvImJ_T0024323.1 MGP_129S1SvImJ_G0016960.1 mouse_genomes_project 1 200264260 200290308 - MGP_129S1SvImJ_P0024323 Traf3ip3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024324.1 MGP_129S1SvImJ_G0016960.1 mouse_genomes_project 1 200264270 200290308 - MGP_129S1SvImJ_P0024324 Traf3ip3 protein_coding protein_coding MGP_129S1SvImJ_T0024325.1 MGP_129S1SvImJ_G0016960.1 mouse_genomes_project 1 200268003 200273585 - MGP_129S1SvImJ_P0024325 Traf3ip3 protein_coding protein_coding MGP_129S1SvImJ_T0024326.1 MGP_129S1SvImJ_G0016960.1 mouse_genomes_project 1 200268007 200286585 - Traf3ip3 protein_coding retained_intron MGP_129S1SvImJ_T0024327.1 MGP_129S1SvImJ_G0016960.1 mouse_genomes_project 1 200273340 200286665 - MGP_129S1SvImJ_P0024327 Traf3ip3 protein_coding protein_coding MGP_129S1SvImJ_T0024328.1 MGP_129S1SvImJ_G0016960.1 mouse_genomes_project 1 200273429 200275905 - MGP_129S1SvImJ_P0024328 Traf3ip3 protein_coding protein_coding MGP_129S1SvImJ_T0024329.1 MGP_129S1SvImJ_G0016960.1 mouse_genomes_project 1 200273956 200290216 - Traf3ip3 protein_coding retained_intron MGP_129S1SvImJ_T0024330.1 MGP_129S1SvImJ_G0016960.1 mouse_genomes_project 1 200283130 200290277 - Traf3ip3 protein_coding retained_intron MGP_129S1SvImJ_T0024331.1 MGP_129S1SvImJ_G0016960.1 mouse_genomes_project 1 200283293 200286734 - MGP_129S1SvImJ_P0024331 Traf3ip3 protein_coding protein_coding MGP_129S1SvImJ_T0024332.1 MGP_129S1SvImJ_G0016960.1 mouse_genomes_project 1 200286790 200290259 - Traf3ip3 protein_coding processed_transcript MGP_129S1SvImJ_T0024333.1 MGP_129S1SvImJ_G0016960.1 mouse_genomes_project 1 200286797 200290263 - Traf3ip3 protein_coding processed_transcript MGP_129S1SvImJ_T0024334.1 MGP_129S1SvImJ_G0016960.1 mouse_genomes_project 1 200289656 200290464 - Traf3ip3 protein_coding processed_transcript MGP_129S1SvImJ_T0003010.1 MGP_129S1SvImJ_G0002826.1 mouse_genomes_project 1 198898437 198900060 - Gm38037 antisense antisense MGP_129S1SvImJ_T0012064.1 MGP_129S1SvImJ_G0010153.1 mouse_genomes_project 1 58653882 58659532 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002842.1 MGP_129S1SvImJ_G0002695.1 mouse_genomes_project 1 64254506 64266616 + Gm13748 antisense antisense MGP_129S1SvImJ_T0005683.1 MGP_129S1SvImJ_G0004784.1 mouse_genomes_project 1 21070420 21070819 + Gm27028 lincRNA lincRNA MGP_129S1SvImJ_T0022711.1 MGP_129S1SvImJ_G0016604.1 mouse_genomes_project 1 158735657 158738201 + MGP_129S1SvImJ_P0022711 Teddm1b protein_coding protein_coding MGP_129S1SvImJ_T0005678.1 MGP_129S1SvImJ_G0004779.1 mouse_genomes_project 1 16858724 16859773 + Gm28340 lincRNA lincRNA MGP_129S1SvImJ_T0002840.1 MGP_129S1SvImJ_G0002693.1 mouse_genomes_project 1 62573141 62617921 - Pard3bos3 antisense antisense MGP_129S1SvImJ_T0012357.1 MGP_129S1SvImJ_G0010446.1 mouse_genomes_project 1 182989157 182989486 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005695.1 MGP_129S1SvImJ_G0004795.1 mouse_genomes_project 1 32809980 32817963 - Gm37233 lincRNA lincRNA MGP_129S1SvImJ_T0005855.1 MGP_129S1SvImJ_G0004913.1 mouse_genomes_project 1 92947127 92948278 - 1700020N18Rik lincRNA lincRNA MGP_129S1SvImJ_T0020442.1 MGP_129S1SvImJ_G0016135.1 mouse_genomes_project 1 73240240 73242790 + MGP_129S1SvImJ_P0020442 Rpl37a protein_coding protein_coding MGP_129S1SvImJ_T0100390.1 MGP_129S1SvImJ_G0038457.1 mouse_genomes_project 1 166288448 166288532 + Mir5117 snoRNA snoRNA MGP_129S1SvImJ_T0012377.1 MGP_129S1SvImJ_G0010466.1 mouse_genomes_project 1 190539311 190539458 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022916.1 MGP_129S1SvImJ_G0016639.1 mouse_genomes_project 1 165216520 165219978 + 4930523C07Rik protein_coding retained_intron MGP_129S1SvImJ_T0022917.1 MGP_129S1SvImJ_G0016639.1 mouse_genomes_project 1 165216522 165244847 + 4930523C07Rik protein_coding lincRNA MGP_129S1SvImJ_T0022918.1 MGP_129S1SvImJ_G0016639.1 mouse_genomes_project 1 165216522 165253534 + 4930523C07Rik protein_coding lincRNA MGP_129S1SvImJ_T0022919.1 MGP_129S1SvImJ_G0016639.1 mouse_genomes_project 1 165216543 165246106 + 4930523C07Rik protein_coding lincRNA MGP_129S1SvImJ_T0022920.1 MGP_129S1SvImJ_G0016639.1 mouse_genomes_project 1 165216585 165244816 + 4930523C07Rik protein_coding lincRNA MGP_129S1SvImJ_T0022921.1 MGP_129S1SvImJ_G0016639.1 mouse_genomes_project 1 165248488 165248788 + MGP_129S1SvImJ_P0022921 4930523C07Rik protein_coding protein_coding MGP_129S1SvImJ_T0023187.1 MGP_129S1SvImJ_G0016695.1 mouse_genomes_project 1 171083797 171127394 - MGP_129S1SvImJ_P0023187 Mpzl1 protein_coding protein_coding MGP_129S1SvImJ_T0023188.1 MGP_129S1SvImJ_G0016695.1 mouse_genomes_project 1 171084935 171097090 - MGP_129S1SvImJ_P0023188 Mpzl1 protein_coding protein_coding MGP_129S1SvImJ_T0023189.1 MGP_129S1SvImJ_G0016695.1 mouse_genomes_project 1 171084974 171127514 - MGP_129S1SvImJ_P0023189 Mpzl1 protein_coding protein_coding MGP_129S1SvImJ_T0023190.1 MGP_129S1SvImJ_G0016695.1 mouse_genomes_project 1 171085215 171127539 - MGP_129S1SvImJ_P0023190 Mpzl1 protein_coding protein_coding MGP_129S1SvImJ_T0023191.1 MGP_129S1SvImJ_G0016695.1 mouse_genomes_project 1 171093106 171101911 - Mpzl1 protein_coding processed_transcript MGP_129S1SvImJ_T0023192.1 MGP_129S1SvImJ_G0016695.1 mouse_genomes_project 1 171095522 171097046 - Mpzl1 protein_coding retained_intron MGP_129S1SvImJ_T0023193.1 MGP_129S1SvImJ_G0016695.1 mouse_genomes_project 1 171096936 171105339 - Mpzl1 protein_coding processed_transcript MGP_129S1SvImJ_T0023194.1 MGP_129S1SvImJ_G0016695.1 mouse_genomes_project 1 171097004 171127443 - MGP_129S1SvImJ_P0023194 Mpzl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023195.1 MGP_129S1SvImJ_G0016695.1 mouse_genomes_project 1 171099730 171127087 - Mpzl1 protein_coding processed_transcript MGP_129S1SvImJ_T0005761.1 MGP_129S1SvImJ_G0004839.1 mouse_genomes_project 1 58380682 58388140 + Gm15834 lincRNA lincRNA MGP_129S1SvImJ_T0005762.1 MGP_129S1SvImJ_G0004839.1 mouse_genomes_project 1 58380686 58395632 + Gm15834 lincRNA lincRNA MGP_129S1SvImJ_T0005763.1 MGP_129S1SvImJ_G0004839.1 mouse_genomes_project 1 58380689 58401335 + Gm15834 lincRNA lincRNA MGP_129S1SvImJ_T0100401.1 MGP_129S1SvImJ_G0038468.1 mouse_genomes_project 1 191958386 191958518 + Snora36b snoRNA snoRNA MGP_129S1SvImJ_T0022296.1 MGP_129S1SvImJ_G0016523.1 mouse_genomes_project 1 139136061 139140192 - MGP_129S1SvImJ_P0022296 Shisa4 protein_coding protein_coding MGP_129S1SvImJ_T0022297.1 MGP_129S1SvImJ_G0016523.1 mouse_genomes_project 1 139136064 139138454 - Shisa4 protein_coding retained_intron MGP_129S1SvImJ_T0022298.1 MGP_129S1SvImJ_G0016523.1 mouse_genomes_project 1 139138842 139140032 - Shisa4 protein_coding retained_intron MGP_129S1SvImJ_T0021052.1 MGP_129S1SvImJ_G0016245.1 mouse_genomes_project 1 87552639 87554515 + B3gnt7 protein_coding retained_intron MGP_129S1SvImJ_T0021053.1 MGP_129S1SvImJ_G0016245.1 mouse_genomes_project 1 87553041 87557112 + MGP_129S1SvImJ_P0021053 B3gnt7 protein_coding protein_coding MGP_129S1SvImJ_T0021054.1 MGP_129S1SvImJ_G0016245.1 mouse_genomes_project 1 87553338 87555656 + MGP_129S1SvImJ_P0021054 B3gnt7 protein_coding protein_coding MGP_129S1SvImJ_T0024024.1 MGP_129S1SvImJ_G0016901.1 mouse_genomes_project 1 189919259 189942999 - MGP_129S1SvImJ_P0024024 Brox protein_coding protein_coding MGP_129S1SvImJ_T0024025.1 MGP_129S1SvImJ_G0016901.1 mouse_genomes_project 1 189919261 189940852 - MGP_129S1SvImJ_P0024025 Brox protein_coding protein_coding MGP_129S1SvImJ_T0024026.1 MGP_129S1SvImJ_G0016901.1 mouse_genomes_project 1 189921340 189943057 - MGP_129S1SvImJ_P0024026 Brox protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024027.1 MGP_129S1SvImJ_G0016901.1 mouse_genomes_project 1 189929756 189932170 - Brox protein_coding retained_intron MGP_129S1SvImJ_T0024028.1 MGP_129S1SvImJ_G0016901.1 mouse_genomes_project 1 189932113 189938693 - Brox protein_coding retained_intron MGP_129S1SvImJ_T0024029.1 MGP_129S1SvImJ_G0016901.1 mouse_genomes_project 1 189932168 189940852 - MGP_129S1SvImJ_P0024029 Brox protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024030.1 MGP_129S1SvImJ_G0016901.1 mouse_genomes_project 1 189933728 189938260 - Brox protein_coding retained_intron MGP_129S1SvImJ_T0024031.1 MGP_129S1SvImJ_G0016901.1 mouse_genomes_project 1 189936830 189940852 - Brox protein_coding processed_transcript MGP_129S1SvImJ_T0024032.1 MGP_129S1SvImJ_G0016901.1 mouse_genomes_project 1 189937924 189941840 - MGP_129S1SvImJ_P0024032 Brox protein_coding protein_coding MGP_129S1SvImJ_T0000603.1 MGP_129S1SvImJ_G0000542.1 mouse_genomes_project 1 106864798 106871238 + TEC TEC MGP_129S1SvImJ_T0022006.1 MGP_129S1SvImJ_G0016459.1 mouse_genomes_project 1 135225862 135252760 + MGP_129S1SvImJ_P0022006 Pm20d1 protein_coding protein_coding MGP_129S1SvImJ_T0022007.1 MGP_129S1SvImJ_G0016459.1 mouse_genomes_project 1 135225879 135252772 + MGP_129S1SvImJ_P0022007 Pm20d1 protein_coding protein_coding MGP_129S1SvImJ_T0022008.1 MGP_129S1SvImJ_G0016459.1 mouse_genomes_project 1 135240638 135244887 + MGP_129S1SvImJ_P0022008 Pm20d1 protein_coding protein_coding MGP_129S1SvImJ_T0022009.1 MGP_129S1SvImJ_G0016459.1 mouse_genomes_project 1 135240676 135240914 + Pm20d1 protein_coding processed_transcript MGP_129S1SvImJ_T0020067.1 MGP_129S1SvImJ_G0016064.1 mouse_genomes_project 1 59111236 59189125 - MGP_129S1SvImJ_P0020067 Als2 protein_coding protein_coding MGP_129S1SvImJ_T0020068.1 MGP_129S1SvImJ_G0016064.1 mouse_genomes_project 1 59112393 59188987 - MGP_129S1SvImJ_P0020068 Als2 protein_coding protein_coding MGP_129S1SvImJ_T0020069.1 MGP_129S1SvImJ_G0016064.1 mouse_genomes_project 1 59139882 59189125 - Als2 protein_coding retained_intron MGP_129S1SvImJ_T0020070.1 MGP_129S1SvImJ_G0016064.1 mouse_genomes_project 1 59166062 59189120 - MGP_129S1SvImJ_P0020070 Als2 protein_coding protein_coding MGP_129S1SvImJ_T0020071.1 MGP_129S1SvImJ_G0016064.1 mouse_genomes_project 1 59166753 59169556 - Als2 protein_coding retained_intron MGP_129S1SvImJ_T0102088.1 MGP_129S1SvImJ_G0039923.1 mouse_genomes_project 1 172690504 172691172 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0023641.1 MGP_129S1SvImJ_G0016803.1 mouse_genomes_project 1 179134982 179140909 - MGP_129S1SvImJ_P0023641 Fcer1a protein_coding protein_coding MGP_129S1SvImJ_T0023642.1 MGP_129S1SvImJ_G0016803.1 mouse_genomes_project 1 179135091 179140889 - MGP_129S1SvImJ_P0023642 Fcer1a protein_coding protein_coding MGP_129S1SvImJ_T0005696.1 MGP_129S1SvImJ_G0004796.1 mouse_genomes_project 1 32867590 32878035 - 4930568A12Rik lincRNA lincRNA MGP_129S1SvImJ_T0005697.1 MGP_129S1SvImJ_G0004796.1 mouse_genomes_project 1 32873397 32878357 - 4930568A12Rik lincRNA lincRNA MGP_129S1SvImJ_T0098430.1 MGP_129S1SvImJ_G0036515.1 mouse_genomes_project 1 171291520 171291638 - Gm24808 rRNA rRNA MGP_129S1SvImJ_T0017006.1 MGP_129S1SvImJ_G0015090.1 mouse_genomes_project 1 32550117 32562455 - Gm26788 processed_transcript antisense MGP_129S1SvImJ_T0017007.1 MGP_129S1SvImJ_G0015090.1 mouse_genomes_project 1 32559208 32562630 - Gm26788 processed_transcript retained_intron MGP_129S1SvImJ_T0018736.1 MGP_129S1SvImJ_G0015808.1 mouse_genomes_project 1 1311254 1445784 - MGP_129S1SvImJ_P0018736 Rp1 protein_coding protein_coding MGP_129S1SvImJ_T0018737.1 MGP_129S1SvImJ_G0015808.1 mouse_genomes_project 1 1370329 1386498 - MGP_129S1SvImJ_P0018737 Rp1 protein_coding protein_coding MGP_129S1SvImJ_T0023045.1 MGP_129S1SvImJ_G0016661.1 mouse_genomes_project 1 167981444 167991952 + MGP_129S1SvImJ_P0023045 Myoc protein_coding protein_coding MGP_129S1SvImJ_T0012339.1 MGP_129S1SvImJ_G0010428.1 mouse_genomes_project 1 171951610 171951781 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018865.1 MGP_129S1SvImJ_G0015831.1 mouse_genomes_project 1 7233283 7250330 - MGP_129S1SvImJ_P0018865 Ppp1r42 protein_coding protein_coding MGP_129S1SvImJ_T0018866.1 MGP_129S1SvImJ_G0015831.1 mouse_genomes_project 1 7233283 7268406 - MGP_129S1SvImJ_P0018866 Ppp1r42 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018867.1 MGP_129S1SvImJ_G0015831.1 mouse_genomes_project 1 7233477 7268316 - MGP_129S1SvImJ_P0018867 Ppp1r42 protein_coding protein_coding MGP_129S1SvImJ_T0018868.1 MGP_129S1SvImJ_G0015831.1 mouse_genomes_project 1 7233482 7273972 - MGP_129S1SvImJ_P0018868 Ppp1r42 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018869.1 MGP_129S1SvImJ_G0015831.1 mouse_genomes_project 1 7259682 7273972 - Ppp1r42 protein_coding retained_intron MGP_129S1SvImJ_T0000477.1 MGP_129S1SvImJ_G0000416.1 mouse_genomes_project 1 36299117 36301051 + TEC TEC MGP_129S1SvImJ_T0009485.1 MGP_129S1SvImJ_G0007601.1 mouse_genomes_project 1 27515641 27515731 - Gm23785 miRNA miRNA MGP_129S1SvImJ_T0009518.1 MGP_129S1SvImJ_G0007634.1 mouse_genomes_project 1 78170400 78170516 - Mir6352 miRNA miRNA MGP_129S1SvImJ_T0011987.1 MGP_129S1SvImJ_G0010076.1 mouse_genomes_project 1 33418320 33418765 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020280.1 MGP_129S1SvImJ_G0016103.1 mouse_genomes_project 1 65263611 65267852 - MGP_129S1SvImJ_P0020280 Crygc protein_coding protein_coding MGP_129S1SvImJ_T0020281.1 MGP_129S1SvImJ_G0016103.1 mouse_genomes_project 1 65263617 65267684 - MGP_129S1SvImJ_P0020281 Crygc protein_coding protein_coding MGP_129S1SvImJ_T0019560.1 MGP_129S1SvImJ_G0015968.1 mouse_genomes_project 1 39266591 39296165 + MGP_129S1SvImJ_P0019560 Il18r1 protein_coding protein_coding MGP_129S1SvImJ_T0019561.1 MGP_129S1SvImJ_G0015968.1 mouse_genomes_project 1 39266715 39296167 + MGP_129S1SvImJ_P0019561 Il18r1 protein_coding protein_coding MGP_129S1SvImJ_T0019562.1 MGP_129S1SvImJ_G0015968.1 mouse_genomes_project 1 39267045 39305448 + MGP_129S1SvImJ_P0019562 Il18r1 protein_coding protein_coding MGP_129S1SvImJ_T0019563.1 MGP_129S1SvImJ_G0015968.1 mouse_genomes_project 1 39267045 39305449 + MGP_129S1SvImJ_P0019563 Il18r1 protein_coding protein_coding MGP_129S1SvImJ_T0019564.1 MGP_129S1SvImJ_G0015968.1 mouse_genomes_project 1 39267045 39305428 + MGP_129S1SvImJ_P0019564 Il18r1 protein_coding protein_coding MGP_129S1SvImJ_T0019565.1 MGP_129S1SvImJ_G0015968.1 mouse_genomes_project 1 39272799 39300496 + MGP_129S1SvImJ_P0019565 Il18r1 protein_coding protein_coding MGP_129S1SvImJ_T0024019.1 MGP_129S1SvImJ_G0016900.1 mouse_genomes_project 1 189723405 189861769 - MGP_129S1SvImJ_P0024019 Disp1 protein_coding protein_coding MGP_129S1SvImJ_T0024020.1 MGP_129S1SvImJ_G0016900.1 mouse_genomes_project 1 189723405 189787231 - MGP_129S1SvImJ_P0024020 Disp1 protein_coding protein_coding MGP_129S1SvImJ_T0024021.1 MGP_129S1SvImJ_G0016900.1 mouse_genomes_project 1 189723405 189861764 - MGP_129S1SvImJ_P0024021 Disp1 protein_coding protein_coding MGP_129S1SvImJ_T0024022.1 MGP_129S1SvImJ_G0016900.1 mouse_genomes_project 1 189733318 189787301 - Disp1 protein_coding retained_intron MGP_129S1SvImJ_T0024023.1 MGP_129S1SvImJ_G0016900.1 mouse_genomes_project 1 189773691 189861801 - MGP_129S1SvImJ_P0024023 Disp1 protein_coding protein_coding MGP_129S1SvImJ_T0102064.1 MGP_129S1SvImJ_G0039899.1 mouse_genomes_project 1 89554407 89555187 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0012268.1 MGP_129S1SvImJ_G0010357.1 mouse_genomes_project 1 142405472 142405623 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023686.1 MGP_129S1SvImJ_G0016830.1 mouse_genomes_project 1 180460582 180461592 + MGP_129S1SvImJ_P0023686 Olfr248 protein_coding protein_coding MGP_129S1SvImJ_T0005836.1 MGP_129S1SvImJ_G0004895.1 mouse_genomes_project 1 88427983 88428746 + lincRNA lincRNA MGP_129S1SvImJ_T0021794.1 MGP_129S1SvImJ_G0016411.1 mouse_genomes_project 1 124346587 124367272 - MGP_129S1SvImJ_P0021794 Htr5b protein_coding protein_coding MGP_129S1SvImJ_T0019582.1 MGP_129S1SvImJ_G0015975.1 mouse_genomes_project 1 41812962 41868309 + MGP_129S1SvImJ_P0019582 Mrps9 protein_coding protein_coding MGP_129S1SvImJ_T0019583.1 MGP_129S1SvImJ_G0015975.1 mouse_genomes_project 1 41812964 41862299 + Mrps9 protein_coding processed_transcript MGP_129S1SvImJ_T0019584.1 MGP_129S1SvImJ_G0015975.1 mouse_genomes_project 1 41812964 41864633 + Mrps9 protein_coding processed_transcript MGP_129S1SvImJ_T0019585.1 MGP_129S1SvImJ_G0015975.1 mouse_genomes_project 1 41812973 41843511 + Mrps9 protein_coding retained_intron MGP_129S1SvImJ_T0019586.1 MGP_129S1SvImJ_G0015975.1 mouse_genomes_project 1 41824174 41861748 + Mrps9 protein_coding retained_intron MGP_129S1SvImJ_T0019587.1 MGP_129S1SvImJ_G0015975.1 mouse_genomes_project 1 41850356 41868303 + MGP_129S1SvImJ_P0019587 Mrps9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019588.1 MGP_129S1SvImJ_G0015975.1 mouse_genomes_project 1 41865676 41868303 + Mrps9 protein_coding retained_intron MGP_129S1SvImJ_T0005931.1 MGP_129S1SvImJ_G0004976.1 mouse_genomes_project 1 140069398 140072577 - Gm37552 lincRNA lincRNA MGP_129S1SvImJ_T0020168.1 MGP_129S1SvImJ_G0016079.1 mouse_genomes_project 1 60803490 60844759 + Cd28 protein_coding processed_transcript MGP_129S1SvImJ_T0020169.1 MGP_129S1SvImJ_G0016079.1 mouse_genomes_project 1 60827020 60854866 + MGP_129S1SvImJ_P0020169 Cd28 protein_coding protein_coding MGP_129S1SvImJ_T0020170.1 MGP_129S1SvImJ_G0016079.1 mouse_genomes_project 1 60827064 60846222 + Cd28 protein_coding retained_intron MGP_129S1SvImJ_T0019909.1 MGP_129S1SvImJ_G0016037.1 mouse_genomes_project 1 56424126 56425518 - MGP_129S1SvImJ_P0019909 Hsfy2 protein_coding protein_coding MGP_129S1SvImJ_T0005898.1 MGP_129S1SvImJ_G0004948.1 mouse_genomes_project 1 123243381 123246032 + 1700012E03Rik lincRNA lincRNA MGP_129S1SvImJ_T0000696.1 MGP_129S1SvImJ_G0000633.1 mouse_genomes_project 1 151579728 151581627 + TEC TEC MGP_129S1SvImJ_T0020831.1 MGP_129S1SvImJ_G0016199.1 mouse_genomes_project 1 79218617 79241515 - MGP_129S1SvImJ_P0020831 protein_coding protein_coding MGP_129S1SvImJ_T0012116.1 MGP_129S1SvImJ_G0010205.1 mouse_genomes_project 1 74068423 74069419 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019679.1 MGP_129S1SvImJ_G0015993.1 mouse_genomes_project 1 44410647 44556185 - MGP_129S1SvImJ_P0019679 Col5a2 protein_coding protein_coding MGP_129S1SvImJ_T0019680.1 MGP_129S1SvImJ_G0015993.1 mouse_genomes_project 1 44426847 44431427 - Col5a2 protein_coding retained_intron MGP_129S1SvImJ_T0019681.1 MGP_129S1SvImJ_G0015993.1 mouse_genomes_project 1 44453051 44556185 - Col5a2 protein_coding retained_intron MGP_129S1SvImJ_T0019682.1 MGP_129S1SvImJ_G0015993.1 mouse_genomes_project 1 44456508 44461442 - Col5a2 protein_coding retained_intron MGP_129S1SvImJ_T0000543.1 MGP_129S1SvImJ_G0000482.1 mouse_genomes_project 1 74875487 74875806 - TEC TEC MGP_129S1SvImJ_T0003004.1 MGP_129S1SvImJ_G0002821.1 mouse_genomes_project 1 196816300 196821018 + Gm37422 antisense antisense MGP_129S1SvImJ_T0011951.1 MGP_129S1SvImJ_G0010040.1 mouse_genomes_project 1 23501020 23501590 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000490.1 MGP_129S1SvImJ_G0000429.1 mouse_genomes_project 1 44537749 44544956 - TEC TEC MGP_129S1SvImJ_T0012112.1 MGP_129S1SvImJ_G0010201.1 mouse_genomes_project 1 72472872 72473352 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000613.1 MGP_129S1SvImJ_G0000552.1 mouse_genomes_project 1 114232395 114233167 + TEC TEC MGP_129S1SvImJ_T0012183.1 MGP_129S1SvImJ_G0010272.1 mouse_genomes_project 1 107674363 107674638 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012296.1 MGP_129S1SvImJ_G0010385.1 mouse_genomes_project 1 154653452 154655519 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102057.1 MGP_129S1SvImJ_G0039892.1 mouse_genomes_project 1 79154343 79154604 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0000655.1 MGP_129S1SvImJ_G0000594.1 mouse_genomes_project 1 135569454 135575401 + TEC TEC MGP_129S1SvImJ_T0000679.1 MGP_129S1SvImJ_G0000616.1 mouse_genomes_project 1 141973409 141974551 + TEC TEC MGP_129S1SvImJ_T0020987.1 MGP_129S1SvImJ_G0016231.1 mouse_genomes_project 1 86783573 86785940 - MGP_129S1SvImJ_P0020987 protein_coding protein_coding MGP_129S1SvImJ_T0012208.1 MGP_129S1SvImJ_G0010297.1 mouse_genomes_project 1 114560954 114562396 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005791.1 MGP_129S1SvImJ_G0004864.1 mouse_genomes_project 1 72342286 72347828 + lincRNA lincRNA MGP_129S1SvImJ_T0005792.1 MGP_129S1SvImJ_G0004864.1 mouse_genomes_project 1 72342291 72347359 + lincRNA lincRNA MGP_129S1SvImJ_T0005793.1 MGP_129S1SvImJ_G0004864.1 mouse_genomes_project 1 72342677 72347211 + lincRNA lincRNA MGP_129S1SvImJ_T0019116.1 MGP_129S1SvImJ_G0015886.1 mouse_genomes_project 1 21673675 21731631 - Smap1 protein_coding processed_transcript MGP_129S1SvImJ_T0019117.1 MGP_129S1SvImJ_G0015886.1 mouse_genomes_project 1 21674454 21745613 - MGP_129S1SvImJ_P0019117 Smap1 protein_coding protein_coding MGP_129S1SvImJ_T0019118.1 MGP_129S1SvImJ_G0015886.1 mouse_genomes_project 1 21675007 21676607 - Smap1 protein_coding processed_transcript MGP_129S1SvImJ_T0019119.1 MGP_129S1SvImJ_G0015886.1 mouse_genomes_project 1 21675258 21745451 - MGP_129S1SvImJ_P0019119 Smap1 protein_coding protein_coding MGP_129S1SvImJ_T0019120.1 MGP_129S1SvImJ_G0015886.1 mouse_genomes_project 1 21677109 21697705 - Smap1 protein_coding processed_transcript MGP_129S1SvImJ_T0019121.1 MGP_129S1SvImJ_G0015886.1 mouse_genomes_project 1 21677362 21731598 - Smap1 protein_coding processed_transcript MGP_129S1SvImJ_T0019122.1 MGP_129S1SvImJ_G0015886.1 mouse_genomes_project 1 21677624 21713351 - Smap1 protein_coding retained_intron MGP_129S1SvImJ_T0102051.1 MGP_129S1SvImJ_G0039886.1 mouse_genomes_project 1 58774879 58837971 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0012211.1 MGP_129S1SvImJ_G0010300.1 mouse_genomes_project 1 115288278 115290422 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100313.1 MGP_129S1SvImJ_G0038380.1 mouse_genomes_project 1 13228902 13229034 + Gm25168 snoRNA snoRNA MGP_129S1SvImJ_T0100349.1 MGP_129S1SvImJ_G0038416.1 mouse_genomes_project 1 87325199 87325321 + Gm22786 snoRNA snoRNA MGP_129S1SvImJ_T0000602.1 MGP_129S1SvImJ_G0000541.1 mouse_genomes_project 1 105706083 105708719 + TEC TEC MGP_129S1SvImJ_T0011986.1 MGP_129S1SvImJ_G0010075.1 mouse_genomes_project 1 33417548 33417777 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021547.1 MGP_129S1SvImJ_G0016359.1 mouse_genomes_project 1 99477954 99487036 - Ppip5k2 protein_coding retained_intron MGP_129S1SvImJ_T0021548.1 MGP_129S1SvImJ_G0016359.1 mouse_genomes_project 1 99477954 99548000 - MGP_129S1SvImJ_P0021548 Ppip5k2 protein_coding protein_coding MGP_129S1SvImJ_T0021549.1 MGP_129S1SvImJ_G0016359.1 mouse_genomes_project 1 99477954 99548000 - MGP_129S1SvImJ_P0021549 Ppip5k2 protein_coding protein_coding MGP_129S1SvImJ_T0021550.1 MGP_129S1SvImJ_G0016359.1 mouse_genomes_project 1 99479571 99539202 - MGP_129S1SvImJ_P0021550 Ppip5k2 protein_coding protein_coding MGP_129S1SvImJ_T0021551.1 MGP_129S1SvImJ_G0016359.1 mouse_genomes_project 1 99483320 99488424 - MGP_129S1SvImJ_P0021551 Ppip5k2 protein_coding protein_coding MGP_129S1SvImJ_T0021552.1 MGP_129S1SvImJ_G0016359.1 mouse_genomes_project 1 99490659 99493181 - Ppip5k2 protein_coding retained_intron MGP_129S1SvImJ_T0021553.1 MGP_129S1SvImJ_G0016359.1 mouse_genomes_project 1 99518070 99522038 - Ppip5k2 protein_coding retained_intron MGP_129S1SvImJ_T0000571.1 MGP_129S1SvImJ_G0000510.1 mouse_genomes_project 1 85860112 85865201 - TEC TEC MGP_129S1SvImJ_T0023594.1 MGP_129S1SvImJ_G0016786.1 mouse_genomes_project 1 178201997 178236295 + MGP_129S1SvImJ_P0023594 Kcnj10 protein_coding protein_coding MGP_129S1SvImJ_T0011882.1 MGP_129S1SvImJ_G0009971.1 mouse_genomes_project 1 3575746 3576219 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000654.1 MGP_129S1SvImJ_G0000593.1 mouse_genomes_project 1 135381052 135381559 - TEC TEC MGP_129S1SvImJ_T0009502.1 MGP_129S1SvImJ_G0007618.1 mouse_genomes_project 1 60701943 60702049 - Gm23762 miRNA miRNA MGP_129S1SvImJ_T0012289.1 MGP_129S1SvImJ_G0010378.1 mouse_genomes_project 1 153094234 153094538 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012237.1 MGP_129S1SvImJ_G0010326.1 mouse_genomes_project 1 125078802 125079637 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099058.1 MGP_129S1SvImJ_G0037125.1 mouse_genomes_project 1 1561118 1561225 + Gm22307 snRNA snRNA MGP_129S1SvImJ_T0011974.1 MGP_129S1SvImJ_G0010063.1 mouse_genomes_project 1 32018495 32018823 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000468.1 MGP_129S1SvImJ_G0000407.1 mouse_genomes_project 1 32654409 32655701 - TEC TEC MGP_129S1SvImJ_T0023559.1 MGP_129S1SvImJ_G0016779.1 mouse_genomes_project 1 178002330 178052605 + MGP_129S1SvImJ_P0023559 Dcaf8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023560.1 MGP_129S1SvImJ_G0016779.1 mouse_genomes_project 1 178002335 178046741 + Dcaf8 protein_coding retained_intron MGP_129S1SvImJ_T0023561.1 MGP_129S1SvImJ_G0016779.1 mouse_genomes_project 1 178002364 178053317 + MGP_129S1SvImJ_P0023561 Dcaf8 protein_coding protein_coding MGP_129S1SvImJ_T0023562.1 MGP_129S1SvImJ_G0016779.1 mouse_genomes_project 1 178002386 178047967 + Dcaf8 protein_coding retained_intron MGP_129S1SvImJ_T0023563.1 MGP_129S1SvImJ_G0016779.1 mouse_genomes_project 1 178002388 178053276 + MGP_129S1SvImJ_P0023563 Dcaf8 protein_coding protein_coding MGP_129S1SvImJ_T0023564.1 MGP_129S1SvImJ_G0016779.1 mouse_genomes_project 1 178002424 178054199 + MGP_129S1SvImJ_P0023564 Dcaf8 protein_coding protein_coding MGP_129S1SvImJ_T0023565.1 MGP_129S1SvImJ_G0016779.1 mouse_genomes_project 1 178003191 178047967 + Dcaf8 protein_coding retained_intron MGP_129S1SvImJ_T0023566.1 MGP_129S1SvImJ_G0016779.1 mouse_genomes_project 1 178029734 178032019 + Dcaf8 protein_coding retained_intron MGP_129S1SvImJ_T0023567.1 MGP_129S1SvImJ_G0016779.1 mouse_genomes_project 1 178029838 178050741 + MGP_129S1SvImJ_P0023567 Dcaf8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023568.1 MGP_129S1SvImJ_G0016779.1 mouse_genomes_project 1 178034100 178040295 + Dcaf8 protein_coding retained_intron MGP_129S1SvImJ_T0023569.1 MGP_129S1SvImJ_G0016779.1 mouse_genomes_project 1 178045540 178054816 + MGP_129S1SvImJ_P0023569 Dcaf8 protein_coding protein_coding MGP_129S1SvImJ_T0009567.1 MGP_129S1SvImJ_G0007683.1 mouse_genomes_project 1 177472418 177472479 - Mir7683 miRNA miRNA MGP_129S1SvImJ_T0005956.1 MGP_129S1SvImJ_G0004995.1 mouse_genomes_project 1 155668934 155672479 + Gm29188 lincRNA lincRNA MGP_129S1SvImJ_T0005821.1 MGP_129S1SvImJ_G0004884.1 mouse_genomes_project 1 79354211 79359112 + Gm29611 lincRNA lincRNA MGP_129S1SvImJ_T0023177.1 MGP_129S1SvImJ_G0016694.1 mouse_genomes_project 1 170979176 171066446 + MGP_129S1SvImJ_P0023177 Adcy10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023178.1 MGP_129S1SvImJ_G0016694.1 mouse_genomes_project 1 170979176 171065841 + MGP_129S1SvImJ_P0023178 Adcy10 protein_coding protein_coding MGP_129S1SvImJ_T0023179.1 MGP_129S1SvImJ_G0016694.1 mouse_genomes_project 1 170979176 171066816 + MGP_129S1SvImJ_P0023179 Adcy10 protein_coding protein_coding MGP_129S1SvImJ_T0023180.1 MGP_129S1SvImJ_G0016694.1 mouse_genomes_project 1 170979182 171065840 + MGP_129S1SvImJ_P0023180 Adcy10 protein_coding protein_coding MGP_129S1SvImJ_T0023181.1 MGP_129S1SvImJ_G0016694.1 mouse_genomes_project 1 170979186 170983534 + Adcy10 protein_coding processed_transcript MGP_129S1SvImJ_T0023182.1 MGP_129S1SvImJ_G0016694.1 mouse_genomes_project 1 170979204 171065838 + MGP_129S1SvImJ_P0023182 Adcy10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023183.1 MGP_129S1SvImJ_G0016694.1 mouse_genomes_project 1 170997912 171056776 + MGP_129S1SvImJ_P0023183 Adcy10 protein_coding protein_coding MGP_129S1SvImJ_T0023184.1 MGP_129S1SvImJ_G0016694.1 mouse_genomes_project 1 171003818 171030660 + Adcy10 protein_coding retained_intron MGP_129S1SvImJ_T0023185.1 MGP_129S1SvImJ_G0016694.1 mouse_genomes_project 1 171011327 171013139 + Adcy10 protein_coding retained_intron MGP_129S1SvImJ_T0023186.1 MGP_129S1SvImJ_G0016694.1 mouse_genomes_project 1 171030483 171038670 + Adcy10 protein_coding processed_transcript MGP_129S1SvImJ_T0000644.1 MGP_129S1SvImJ_G0000583.1 mouse_genomes_project 1 133024348 133027035 + TEC TEC MGP_129S1SvImJ_T0019412.1 MGP_129S1SvImJ_G0015937.1 mouse_genomes_project 1 36029915 36050325 - MGP_129S1SvImJ_P0019412 Coa5 protein_coding protein_coding MGP_129S1SvImJ_T0019413.1 MGP_129S1SvImJ_G0015937.1 mouse_genomes_project 1 36048733 36050222 - Coa5 protein_coding retained_intron MGP_129S1SvImJ_T0011894.1 MGP_129S1SvImJ_G0009983.1 mouse_genomes_project 1 4923703 4924582 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012222.1 MGP_129S1SvImJ_G0010311.1 mouse_genomes_project 1 121348200 121348514 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000457.1 MGP_129S1SvImJ_G0000397.1 mouse_genomes_project 1 31031908 31034378 + TEC TEC MGP_129S1SvImJ_T0002998.1 MGP_129S1SvImJ_G0002816.1 mouse_genomes_project 1 194157954 194187774 - Gm38155 antisense antisense MGP_129S1SvImJ_T0021429.1 MGP_129S1SvImJ_G0016333.1 mouse_genomes_project 1 94622043 94714528 - MGP_129S1SvImJ_P0021429 Kif1a protein_coding protein_coding MGP_129S1SvImJ_T0021430.1 MGP_129S1SvImJ_G0016333.1 mouse_genomes_project 1 94624342 94714537 - MGP_129S1SvImJ_P0021430 Kif1a protein_coding protein_coding MGP_129S1SvImJ_T0021431.1 MGP_129S1SvImJ_G0016333.1 mouse_genomes_project 1 94624531 94714657 - MGP_129S1SvImJ_P0021431 Kif1a protein_coding protein_coding MGP_129S1SvImJ_T0021432.1 MGP_129S1SvImJ_G0016333.1 mouse_genomes_project 1 94624871 94714553 - MGP_129S1SvImJ_P0021432 Kif1a protein_coding protein_coding MGP_129S1SvImJ_T0021433.1 MGP_129S1SvImJ_G0016333.1 mouse_genomes_project 1 94625048 94693156 - MGP_129S1SvImJ_P0021433 Kif1a protein_coding protein_coding MGP_129S1SvImJ_T0021434.1 MGP_129S1SvImJ_G0016333.1 mouse_genomes_project 1 94628916 94631304 - MGP_129S1SvImJ_P0021434 Kif1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021435.1 MGP_129S1SvImJ_G0016333.1 mouse_genomes_project 1 94630088 94633801 - Kif1a protein_coding retained_intron MGP_129S1SvImJ_T0021436.1 MGP_129S1SvImJ_G0016333.1 mouse_genomes_project 1 94645601 94714552 - Kif1a protein_coding processed_transcript MGP_129S1SvImJ_T0021437.1 MGP_129S1SvImJ_G0016333.1 mouse_genomes_project 1 94649056 94662092 - MGP_129S1SvImJ_P0021437 Kif1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021438.1 MGP_129S1SvImJ_G0016333.1 mouse_genomes_project 1 94676864 94679491 - Kif1a protein_coding processed_transcript MGP_129S1SvImJ_T0021439.1 MGP_129S1SvImJ_G0016333.1 mouse_genomes_project 1 94688458 94714540 - MGP_129S1SvImJ_P0021439 Kif1a protein_coding protein_coding MGP_129S1SvImJ_T0020586.1 MGP_129S1SvImJ_G0016160.1 mouse_genomes_project 1 75320939 75346187 + MGP_129S1SvImJ_P0020586 Cyp27a1 protein_coding protein_coding MGP_129S1SvImJ_T0020587.1 MGP_129S1SvImJ_G0016160.1 mouse_genomes_project 1 75343645 75345011 + Cyp27a1 protein_coding retained_intron MGP_129S1SvImJ_T0020588.1 MGP_129S1SvImJ_G0016160.1 mouse_genomes_project 1 75345103 75346118 + Cyp27a1 protein_coding retained_intron MGP_129S1SvImJ_T0000451.1 MGP_129S1SvImJ_G0000391.1 mouse_genomes_project 1 26599756 26601270 + TEC TEC MGP_129S1SvImJ_T0017023.1 MGP_129S1SvImJ_G0015099.1 mouse_genomes_project 1 56765770 56769581 + 9130024F11Rik processed_transcript antisense MGP_129S1SvImJ_T0017024.1 MGP_129S1SvImJ_G0015099.1 mouse_genomes_project 1 56765861 56767992 + 9130024F11Rik processed_transcript antisense MGP_129S1SvImJ_T0017025.1 MGP_129S1SvImJ_G0015099.1 mouse_genomes_project 1 56765863 56841116 + 9130024F11Rik processed_transcript antisense MGP_129S1SvImJ_T0017026.1 MGP_129S1SvImJ_G0015099.1 mouse_genomes_project 1 56766715 56769577 + 9130024F11Rik processed_transcript TEC MGP_129S1SvImJ_T0017027.1 MGP_129S1SvImJ_G0015099.1 mouse_genomes_project 1 56838993 56848735 + 9130024F11Rik processed_transcript antisense MGP_129S1SvImJ_T0023097.1 MGP_129S1SvImJ_G0016673.1 mouse_genomes_project 1 169184862 169317045 + MGP_129S1SvImJ_P0023097 Kifap3 protein_coding protein_coding MGP_129S1SvImJ_T0023098.1 MGP_129S1SvImJ_G0016673.1 mouse_genomes_project 1 169184862 169317045 + MGP_129S1SvImJ_P0023098 Kifap3 protein_coding protein_coding MGP_129S1SvImJ_T0019421.1 MGP_129S1SvImJ_G0015939.1 mouse_genomes_project 1 36063946 36169617 - MGP_129S1SvImJ_P0019421 Mgat4a protein_coding protein_coding MGP_129S1SvImJ_T0019422.1 MGP_129S1SvImJ_G0015939.1 mouse_genomes_project 1 36066600 36174213 - MGP_129S1SvImJ_P0019422 Mgat4a protein_coding protein_coding MGP_129S1SvImJ_T0019423.1 MGP_129S1SvImJ_G0015939.1 mouse_genomes_project 1 36087347 36125349 - MGP_129S1SvImJ_P0019423 Mgat4a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019424.1 MGP_129S1SvImJ_G0015939.1 mouse_genomes_project 1 36087350 36125311 - MGP_129S1SvImJ_P0019424 Mgat4a protein_coding protein_coding MGP_129S1SvImJ_T0019425.1 MGP_129S1SvImJ_G0015939.1 mouse_genomes_project 1 36124941 36128054 - Mgat4a protein_coding retained_intron MGP_129S1SvImJ_T0019426.1 MGP_129S1SvImJ_G0015939.1 mouse_genomes_project 1 36166434 36169465 - Mgat4a protein_coding retained_intron MGP_129S1SvImJ_T0098772.1 MGP_129S1SvImJ_G0036857.1 mouse_genomes_project 1 35484227 35487166 - Gm38115 sense_intronic sense_intronic MGP_129S1SvImJ_T0011962.1 MGP_129S1SvImJ_G0010051.1 mouse_genomes_project 1 29205436 29206163 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011967.1 MGP_129S1SvImJ_G0010056.1 mouse_genomes_project 1 30000388 30001223 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005844.1 MGP_129S1SvImJ_G0004902.1 mouse_genomes_project 1 90311495 90319457 - Gm29337 lincRNA lincRNA MGP_129S1SvImJ_T0000387.1 MGP_129S1SvImJ_G0000329.1 mouse_genomes_project 1 2582983 2585015 + TEC TEC MGP_129S1SvImJ_T0012185.1 MGP_129S1SvImJ_G0010274.1 mouse_genomes_project 1 107884975 107885205 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024033.1 MGP_129S1SvImJ_G0016902.1 mouse_genomes_project 1 189943055 189971760 + MGP_129S1SvImJ_P0024033 Aida protein_coding protein_coding MGP_129S1SvImJ_T0024034.1 MGP_129S1SvImJ_G0016902.1 mouse_genomes_project 1 189943576 189964074 + MGP_129S1SvImJ_P0024034 Aida protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024035.1 MGP_129S1SvImJ_G0016902.1 mouse_genomes_project 1 189949873 189968775 + Aida protein_coding retained_intron MGP_129S1SvImJ_T0024036.1 MGP_129S1SvImJ_G0016902.1 mouse_genomes_project 1 189951672 189964368 + Aida protein_coding retained_intron MGP_129S1SvImJ_T0024037.1 MGP_129S1SvImJ_G0016902.1 mouse_genomes_project 1 189968575 189969201 + Aida protein_coding retained_intron MGP_129S1SvImJ_T0000657.1 MGP_129S1SvImJ_G0000596.1 mouse_genomes_project 1 136650955 136654040 - TEC TEC MGP_129S1SvImJ_T0000658.1 MGP_129S1SvImJ_G0000596.1 mouse_genomes_project 1 136653437 136654040 - TEC TEC MGP_129S1SvImJ_T0012171.1 MGP_129S1SvImJ_G0010260.1 mouse_genomes_project 1 102553738 102554405 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005686.1 MGP_129S1SvImJ_G0004787.1 mouse_genomes_project 1 22836534 22838302 - Gm28237 lincRNA lincRNA MGP_129S1SvImJ_T0005687.1 MGP_129S1SvImJ_G0004787.1 mouse_genomes_project 1 22837321 22838484 - Gm28237 lincRNA lincRNA MGP_129S1SvImJ_T0002946.1 MGP_129S1SvImJ_G0002774.1 mouse_genomes_project 1 166291390 166292177 + Gm37634 antisense antisense MGP_129S1SvImJ_T0009530.1 MGP_129S1SvImJ_G0007646.1 mouse_genomes_project 1 94891828 94891890 + Mir6901 miRNA miRNA MGP_129S1SvImJ_T0021979.1 MGP_129S1SvImJ_G0016453.1 mouse_genomes_project 1 134708828 134958565 - MGP_129S1SvImJ_P0021979 Srgap2 protein_coding protein_coding MGP_129S1SvImJ_T0021980.1 MGP_129S1SvImJ_G0016453.1 mouse_genomes_project 1 134712940 134724160 - MGP_129S1SvImJ_P0021980 Srgap2 protein_coding protein_coding MGP_129S1SvImJ_T0021981.1 MGP_129S1SvImJ_G0016453.1 mouse_genomes_project 1 134718564 134750664 - Srgap2 protein_coding processed_transcript MGP_129S1SvImJ_T0021982.1 MGP_129S1SvImJ_G0016453.1 mouse_genomes_project 1 134718795 134958565 - MGP_129S1SvImJ_P0021982 Srgap2 protein_coding protein_coding MGP_129S1SvImJ_T0021983.1 MGP_129S1SvImJ_G0016453.1 mouse_genomes_project 1 134718796 134727922 - Srgap2 protein_coding processed_transcript MGP_129S1SvImJ_T0021984.1 MGP_129S1SvImJ_G0016453.1 mouse_genomes_project 1 134718798 134762161 - MGP_129S1SvImJ_P0021984 Srgap2 protein_coding protein_coding MGP_129S1SvImJ_T0021985.1 MGP_129S1SvImJ_G0016453.1 mouse_genomes_project 1 134719333 134719958 - Srgap2 protein_coding processed_transcript MGP_129S1SvImJ_T0021986.1 MGP_129S1SvImJ_G0016453.1 mouse_genomes_project 1 134720218 134782829 - MGP_129S1SvImJ_P0021986 Srgap2 protein_coding protein_coding MGP_129S1SvImJ_T0021987.1 MGP_129S1SvImJ_G0016453.1 mouse_genomes_project 1 134736197 134749857 - Srgap2 protein_coding retained_intron MGP_129S1SvImJ_T0021988.1 MGP_129S1SvImJ_G0016453.1 mouse_genomes_project 1 134780790 134958570 - Srgap2 protein_coding retained_intron MGP_129S1SvImJ_T0021989.1 MGP_129S1SvImJ_G0016453.1 mouse_genomes_project 1 134824828 134943355 - MGP_129S1SvImJ_P0021989 Srgap2 protein_coding protein_coding MGP_129S1SvImJ_T0021990.1 MGP_129S1SvImJ_G0016453.1 mouse_genomes_project 1 134849622 134933273 - MGP_129S1SvImJ_P0021990 Srgap2 protein_coding protein_coding MGP_129S1SvImJ_T0000518.1 MGP_129S1SvImJ_G0000457.1 mouse_genomes_project 1 61756960 61759927 + TEC TEC MGP_129S1SvImJ_T0023294.1 MGP_129S1SvImJ_G0016719.1 mouse_genomes_project 1 175130479 175166570 - MGP_129S1SvImJ_P0023294 Nuf2 protein_coding protein_coding MGP_129S1SvImJ_T0023295.1 MGP_129S1SvImJ_G0016719.1 mouse_genomes_project 1 175130858 175166534 - MGP_129S1SvImJ_P0023295 Nuf2 protein_coding protein_coding MGP_129S1SvImJ_T0023296.1 MGP_129S1SvImJ_G0016719.1 mouse_genomes_project 1 175140386 175157506 - MGP_129S1SvImJ_P0023296 Nuf2 protein_coding protein_coding MGP_129S1SvImJ_T0023297.1 MGP_129S1SvImJ_G0016719.1 mouse_genomes_project 1 175145627 175166517 - MGP_129S1SvImJ_P0023297 Nuf2 protein_coding protein_coding MGP_129S1SvImJ_T0023298.1 MGP_129S1SvImJ_G0016719.1 mouse_genomes_project 1 175160145 175166524 - Nuf2 protein_coding retained_intron MGP_129S1SvImJ_T0099076.1 MGP_129S1SvImJ_G0037143.1 mouse_genomes_project 1 34244257 34244362 + Gm25634 snRNA snRNA MGP_129S1SvImJ_T0019604.1 MGP_129S1SvImJ_G0015980.1 mouse_genomes_project 1 42446340 42538978 + MGP_129S1SvImJ_P0019604 Nck2 protein_coding protein_coding MGP_129S1SvImJ_T0019605.1 MGP_129S1SvImJ_G0015980.1 mouse_genomes_project 1 42447512 42464687 + Nck2 protein_coding processed_transcript MGP_129S1SvImJ_T0019606.1 MGP_129S1SvImJ_G0015980.1 mouse_genomes_project 1 42447512 42577258 + MGP_129S1SvImJ_P0019606 Nck2 protein_coding protein_coding MGP_129S1SvImJ_T0019607.1 MGP_129S1SvImJ_G0015980.1 mouse_genomes_project 1 42459075 42464715 + Nck2 protein_coding processed_transcript MGP_129S1SvImJ_T0019608.1 MGP_129S1SvImJ_G0015980.1 mouse_genomes_project 1 42537750 42560154 + MGP_129S1SvImJ_P0019608 Nck2 protein_coding protein_coding MGP_129S1SvImJ_T0019609.1 MGP_129S1SvImJ_G0015980.1 mouse_genomes_project 1 42538914 42575415 + MGP_129S1SvImJ_P0019609 Nck2 protein_coding protein_coding MGP_129S1SvImJ_T0021354.1 MGP_129S1SvImJ_G0016314.1 mouse_genomes_project 1 93495996 93749786 - MGP_129S1SvImJ_P0021354 Hdac4 protein_coding protein_coding MGP_129S1SvImJ_T0021355.1 MGP_129S1SvImJ_G0016314.1 mouse_genomes_project 1 93501996 93716441 - MGP_129S1SvImJ_P0021355 Hdac4 protein_coding protein_coding MGP_129S1SvImJ_T0021356.1 MGP_129S1SvImJ_G0016314.1 mouse_genomes_project 1 93502197 93576074 - Hdac4 protein_coding processed_transcript MGP_129S1SvImJ_T0021357.1 MGP_129S1SvImJ_G0016314.1 mouse_genomes_project 1 93502442 93504094 - Hdac4 protein_coding retained_intron MGP_129S1SvImJ_T0021358.1 MGP_129S1SvImJ_G0016314.1 mouse_genomes_project 1 93502586 93716325 - MGP_129S1SvImJ_P0021358 Hdac4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0021359.1 MGP_129S1SvImJ_G0016314.1 mouse_genomes_project 1 93524595 93544721 - MGP_129S1SvImJ_P0021359 Hdac4 protein_coding protein_coding MGP_129S1SvImJ_T0021360.1 MGP_129S1SvImJ_G0016314.1 mouse_genomes_project 1 93558270 93561846 - Hdac4 protein_coding retained_intron MGP_129S1SvImJ_T0021361.1 MGP_129S1SvImJ_G0016314.1 mouse_genomes_project 1 93572888 93576079 - Hdac4 protein_coding retained_intron MGP_129S1SvImJ_T0021362.1 MGP_129S1SvImJ_G0016314.1 mouse_genomes_project 1 93600377 93749742 - MGP_129S1SvImJ_P0021362 Hdac4 protein_coding protein_coding MGP_129S1SvImJ_T0021363.1 MGP_129S1SvImJ_G0016314.1 mouse_genomes_project 1 93600388 93681014 - Hdac4 protein_coding processed_transcript MGP_129S1SvImJ_T0021364.1 MGP_129S1SvImJ_G0016314.1 mouse_genomes_project 1 93600472 93681014 - Hdac4 protein_coding processed_transcript MGP_129S1SvImJ_T0012244.1 MGP_129S1SvImJ_G0010333.1 mouse_genomes_project 1 126810048 126810933 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000831.1 MGP_129S1SvImJ_G0000765.1 mouse_genomes_project 1 202175722 202178661 + TEC TEC MGP_129S1SvImJ_T0000470.1 MGP_129S1SvImJ_G0000409.1 mouse_genomes_project 1 34529029 34530401 - TEC TEC MGP_129S1SvImJ_T0012396.1 MGP_129S1SvImJ_G0010485.1 mouse_genomes_project 1 200990003 200990931 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023092.1 MGP_129S1SvImJ_G0016671.1 mouse_genomes_project 1 168784874 168803648 - MGP_129S1SvImJ_P0023092 Gorab protein_coding protein_coding MGP_129S1SvImJ_T0023093.1 MGP_129S1SvImJ_G0016671.1 mouse_genomes_project 1 168784878 168803635 - MGP_129S1SvImJ_P0023093 Gorab protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023094.1 MGP_129S1SvImJ_G0016671.1 mouse_genomes_project 1 168794394 168803590 - Gorab protein_coding retained_intron MGP_129S1SvImJ_T0022082.1 MGP_129S1SvImJ_G0016475.1 mouse_genomes_project 1 135999950 136015797 - MGP_129S1SvImJ_P0022082 Cntn2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022083.1 MGP_129S1SvImJ_G0016475.1 mouse_genomes_project 1 135999950 136006164 - MGP_129S1SvImJ_P0022083 Cntn2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022084.1 MGP_129S1SvImJ_G0016475.1 mouse_genomes_project 1 136002305 136036982 - Cntn2 protein_coding retained_intron MGP_129S1SvImJ_T0022085.1 MGP_129S1SvImJ_G0016475.1 mouse_genomes_project 1 136002309 136037031 - MGP_129S1SvImJ_P0022085 Cntn2 protein_coding protein_coding MGP_129S1SvImJ_T0022086.1 MGP_129S1SvImJ_G0016475.1 mouse_genomes_project 1 136002319 136036957 - Cntn2 protein_coding retained_intron MGP_129S1SvImJ_T0022087.1 MGP_129S1SvImJ_G0016475.1 mouse_genomes_project 1 136007527 136009885 - Cntn2 protein_coding retained_intron MGP_129S1SvImJ_T0022088.1 MGP_129S1SvImJ_G0016475.1 mouse_genomes_project 1 136023003 136027896 - MGP_129S1SvImJ_P0022088 Cntn2 protein_coding protein_coding MGP_129S1SvImJ_T0022089.1 MGP_129S1SvImJ_G0016475.1 mouse_genomes_project 1 136027668 136037348 - MGP_129S1SvImJ_P0022089 Cntn2 protein_coding protein_coding MGP_129S1SvImJ_T0011259.1 MGP_129S1SvImJ_G0009375.1 mouse_genomes_project 1 11333936 11334244 + Gm25491 misc_RNA misc_RNA MGP_129S1SvImJ_T0098799.1 MGP_129S1SvImJ_G0036883.1 mouse_genomes_project 1 190084245 190085701 + Gm37214 sense_intronic sense_intronic MGP_129S1SvImJ_T0022048.1 MGP_129S1SvImJ_G0016467.1 mouse_genomes_project 1 135659175 135733154 + MGP_129S1SvImJ_P0022048 Lemd1 protein_coding protein_coding MGP_129S1SvImJ_T0022049.1 MGP_129S1SvImJ_G0016467.1 mouse_genomes_project 1 135659199 135731318 + MGP_129S1SvImJ_P0022049 Lemd1 protein_coding protein_coding MGP_129S1SvImJ_T0022050.1 MGP_129S1SvImJ_G0016467.1 mouse_genomes_project 1 135659201 135677230 + Lemd1 protein_coding processed_transcript MGP_129S1SvImJ_T0022051.1 MGP_129S1SvImJ_G0016467.1 mouse_genomes_project 1 135668710 135673466 + Lemd1 protein_coding processed_transcript MGP_129S1SvImJ_T0022052.1 MGP_129S1SvImJ_G0016467.1 mouse_genomes_project 1 135671534 135672192 + Lemd1 protein_coding processed_transcript MGP_129S1SvImJ_T0022053.1 MGP_129S1SvImJ_G0016467.1 mouse_genomes_project 1 135693678 135731125 + MGP_129S1SvImJ_P0022053 Lemd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022054.1 MGP_129S1SvImJ_G0016467.1 mouse_genomes_project 1 135693707 135730945 + MGP_129S1SvImJ_P0022054 Lemd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022055.1 MGP_129S1SvImJ_G0016467.1 mouse_genomes_project 1 135695479 135696908 + Lemd1 protein_coding retained_intron MGP_129S1SvImJ_T0022056.1 MGP_129S1SvImJ_G0016467.1 mouse_genomes_project 1 135695479 135730970 + MGP_129S1SvImJ_P0022056 Lemd1 protein_coding protein_coding MGP_129S1SvImJ_T0098796.1 MGP_129S1SvImJ_G0036880.1 mouse_genomes_project 1 165953400 165954040 - Gm37328 sense_intronic sense_intronic MGP_129S1SvImJ_T0000701.1 MGP_129S1SvImJ_G0000638.1 mouse_genomes_project 1 154058448 154060465 - TEC TEC MGP_129S1SvImJ_T0005887.1 MGP_129S1SvImJ_G0004939.1 mouse_genomes_project 1 113736351 113810054 - Gm29088 lincRNA lincRNA MGP_129S1SvImJ_T0012054.1 MGP_129S1SvImJ_G0010143.1 mouse_genomes_project 1 54886656 54886963 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000616.1 MGP_129S1SvImJ_G0000555.1 mouse_genomes_project 1 123690958 123694081 + TEC TEC MGP_129S1SvImJ_T0005694.1 MGP_129S1SvImJ_G0004794.1 mouse_genomes_project 1 32719289 32720167 - Gm37958 lincRNA lincRNA MGP_129S1SvImJ_T0011262.1 MGP_129S1SvImJ_G0009378.1 mouse_genomes_project 1 31049582 31049874 + Gm23024 misc_RNA misc_RNA MGP_129S1SvImJ_T0021394.1 MGP_129S1SvImJ_G0016326.1 mouse_genomes_project 1 94431181 94465528 + MGP_129S1SvImJ_P0021394 Gpc1 protein_coding protein_coding MGP_129S1SvImJ_T0021395.1 MGP_129S1SvImJ_G0016326.1 mouse_genomes_project 1 94431505 94435214 + Gpc1 protein_coding processed_transcript MGP_129S1SvImJ_T0021396.1 MGP_129S1SvImJ_G0016326.1 mouse_genomes_project 1 94454142 94456913 + Gpc1 protein_coding retained_intron MGP_129S1SvImJ_T0021397.1 MGP_129S1SvImJ_G0016326.1 mouse_genomes_project 1 94457506 94462291 + Gpc1 protein_coding retained_intron MGP_129S1SvImJ_T0021398.1 MGP_129S1SvImJ_G0016326.1 mouse_genomes_project 1 94457712 94462364 + Gpc1 protein_coding retained_intron MGP_129S1SvImJ_T0011969.1 MGP_129S1SvImJ_G0010058.1 mouse_genomes_project 1 31465229 31465980 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006002.1 MGP_129S1SvImJ_G0005030.1 mouse_genomes_project 1 171611388 171611549 + Gm37923 lincRNA lincRNA MGP_129S1SvImJ_T0023257.1 MGP_129S1SvImJ_G0016708.1 mouse_genomes_project 1 172182866 172202657 - MGP_129S1SvImJ_P0023257 Fmo9 protein_coding protein_coding MGP_129S1SvImJ_T0023258.1 MGP_129S1SvImJ_G0016708.1 mouse_genomes_project 1 172184099 172198499 - MGP_129S1SvImJ_P0023258 Fmo9 protein_coding protein_coding MGP_129S1SvImJ_T0000485.1 MGP_129S1SvImJ_G0000424.1 mouse_genomes_project 1 41418144 41421993 + TEC TEC MGP_129S1SvImJ_T0002955.1 MGP_129S1SvImJ_G0002779.1 mouse_genomes_project 1 168359906 168447705 + Gm37273 antisense antisense MGP_129S1SvImJ_T0012318.1 MGP_129S1SvImJ_G0010407.1 mouse_genomes_project 1 162677927 162678125 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005798.1 MGP_129S1SvImJ_G0004868.1 mouse_genomes_project 1 72588490 72604131 - Gm4319 lincRNA lincRNA MGP_129S1SvImJ_T0011959.1 MGP_129S1SvImJ_G0010048.1 mouse_genomes_project 1 27360653 27361203 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019123.1 MGP_129S1SvImJ_G0015887.1 mouse_genomes_project 1 21831289 21841007 - MGP_129S1SvImJ_P0019123 Sdhaf4 protein_coding protein_coding MGP_129S1SvImJ_T0019124.1 MGP_129S1SvImJ_G0015887.1 mouse_genomes_project 1 21838316 21840981 - Sdhaf4 protein_coding processed_transcript MGP_129S1SvImJ_T0006038.1 MGP_129S1SvImJ_G0005059.1 mouse_genomes_project 1 190077165 190077548 + Gm37986 lincRNA lincRNA MGP_129S1SvImJ_T0012076.1 MGP_129S1SvImJ_G0010165.1 mouse_genomes_project 1 60980027 60980558 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000674.1 MGP_129S1SvImJ_G0000612.1 mouse_genomes_project 1 141922434 141924419 + TEC TEC MGP_129S1SvImJ_T0005960.1 MGP_129S1SvImJ_G0004999.1 mouse_genomes_project 1 158803214 158805279 + Gm29290 lincRNA lincRNA MGP_129S1SvImJ_T0012382.1 MGP_129S1SvImJ_G0010471.1 mouse_genomes_project 1 195961436 195962665 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012354.1 MGP_129S1SvImJ_G0010443.1 mouse_genomes_project 1 178654436 178654867 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005924.1 MGP_129S1SvImJ_G0004969.1 mouse_genomes_project 1 137203258 137207242 + Gm26706 lincRNA lincRNA MGP_129S1SvImJ_T0021725.1 MGP_129S1SvImJ_G0016394.1 mouse_genomes_project 1 122150953 122163049 - MGP_129S1SvImJ_P0021725 Inhbb protein_coding protein_coding MGP_129S1SvImJ_T0022010.1 MGP_129S1SvImJ_G0016460.1 mouse_genomes_project 1 135260029 135262809 + Slc41a1 protein_coding processed_transcript MGP_129S1SvImJ_T0022011.1 MGP_129S1SvImJ_G0016460.1 mouse_genomes_project 1 135260513 135281397 + MGP_129S1SvImJ_P0022011 Slc41a1 protein_coding protein_coding MGP_129S1SvImJ_T0022012.1 MGP_129S1SvImJ_G0016460.1 mouse_genomes_project 1 135275371 135279161 + Slc41a1 protein_coding retained_intron MGP_129S1SvImJ_T0099107.1 MGP_129S1SvImJ_G0037174.1 mouse_genomes_project 1 121153757 121153882 - Gm22710 snRNA snRNA MGP_129S1SvImJ_T0011892.1 MGP_129S1SvImJ_G0009981.1 mouse_genomes_project 1 4857496 4857782 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022727.1 MGP_129S1SvImJ_G0016609.1 mouse_genomes_project 1 159996887 160000163 - MGP_129S1SvImJ_P0022727 Ier5 protein_coding protein_coding MGP_129S1SvImJ_T0019090.1 MGP_129S1SvImJ_G0015878.1 mouse_genomes_project 1 19009328 19013441 + MGP_129S1SvImJ_P0019090 protein_coding protein_coding MGP_129S1SvImJ_T0012100.1 MGP_129S1SvImJ_G0010189.1 mouse_genomes_project 1 66302660 66303072 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019610.1 MGP_129S1SvImJ_G0015981.1 mouse_genomes_project 1 42759633 42771595 + MGP_129S1SvImJ_P0019610 1500015O10Rik protein_coding protein_coding MGP_129S1SvImJ_T0012162.1 MGP_129S1SvImJ_G0010251.1 mouse_genomes_project 1 98739935 98740899 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024369.1 MGP_129S1SvImJ_G0016968.1 mouse_genomes_project 1 202273219 202314503 - MGP_129S1SvImJ_P0024369 Cr1l protein_coding protein_coding MGP_129S1SvImJ_T0024370.1 MGP_129S1SvImJ_G0016968.1 mouse_genomes_project 1 202274496 202314482 - MGP_129S1SvImJ_P0024370 Cr1l protein_coding protein_coding MGP_129S1SvImJ_T0024371.1 MGP_129S1SvImJ_G0016968.1 mouse_genomes_project 1 202286874 202290549 - Cr1l protein_coding retained_intron MGP_129S1SvImJ_T0024372.1 MGP_129S1SvImJ_G0016968.1 mouse_genomes_project 1 202286970 202314720 - MGP_129S1SvImJ_P0024372 Cr1l protein_coding protein_coding MGP_129S1SvImJ_T0024373.1 MGP_129S1SvImJ_G0016968.1 mouse_genomes_project 1 202286976 202300800 - MGP_129S1SvImJ_P0024373 Cr1l protein_coding protein_coding MGP_129S1SvImJ_T0024374.1 MGP_129S1SvImJ_G0016968.1 mouse_genomes_project 1 202297813 202312621 - Cr1l protein_coding retained_intron MGP_129S1SvImJ_T0024375.1 MGP_129S1SvImJ_G0016968.1 mouse_genomes_project 1 202297940 202314745 - MGP_129S1SvImJ_P0024375 Cr1l protein_coding protein_coding MGP_129S1SvImJ_T0024376.1 MGP_129S1SvImJ_G0016968.1 mouse_genomes_project 1 202309073 202314693 - Cr1l protein_coding retained_intron MGP_129S1SvImJ_T0024377.1 MGP_129S1SvImJ_G0016968.1 mouse_genomes_project 1 202312352 202314489 - MGP_129S1SvImJ_P0024377 Cr1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024378.1 MGP_129S1SvImJ_G0016968.1 mouse_genomes_project 1 202312804 202314514 - Cr1l protein_coding retained_intron MGP_129S1SvImJ_T0023068.1 MGP_129S1SvImJ_G0016665.1 mouse_genomes_project 1 168184759 168228422 - MGP_129S1SvImJ_P0023068 Fmo1 protein_coding protein_coding MGP_129S1SvImJ_T0023069.1 MGP_129S1SvImJ_G0016665.1 mouse_genomes_project 1 168184965 168185672 - Fmo1 protein_coding processed_transcript MGP_129S1SvImJ_T0023070.1 MGP_129S1SvImJ_G0016665.1 mouse_genomes_project 1 168185248 168189873 - Fmo1 protein_coding processed_transcript MGP_129S1SvImJ_T0023071.1 MGP_129S1SvImJ_G0016665.1 mouse_genomes_project 1 168186768 168189873 - Fmo1 protein_coding retained_intron MGP_129S1SvImJ_T0023072.1 MGP_129S1SvImJ_G0016665.1 mouse_genomes_project 1 168189005 168220662 - MGP_129S1SvImJ_P0023072 Fmo1 protein_coding protein_coding MGP_129S1SvImJ_T0023073.1 MGP_129S1SvImJ_G0016665.1 mouse_genomes_project 1 168191470 168220520 - MGP_129S1SvImJ_P0023073 Fmo1 protein_coding protein_coding MGP_129S1SvImJ_T0023074.1 MGP_129S1SvImJ_G0016665.1 mouse_genomes_project 1 168191496 168220414 - MGP_129S1SvImJ_P0023074 Fmo1 protein_coding protein_coding MGP_129S1SvImJ_T0019827.1 MGP_129S1SvImJ_G0016021.1 mouse_genomes_project 1 52889277 52897964 - MGP_129S1SvImJ_P0019827 Asnsd1 protein_coding protein_coding MGP_129S1SvImJ_T0019828.1 MGP_129S1SvImJ_G0016021.1 mouse_genomes_project 1 52889305 52897964 - MGP_129S1SvImJ_P0019828 Asnsd1 protein_coding protein_coding MGP_129S1SvImJ_T0019829.1 MGP_129S1SvImJ_G0016021.1 mouse_genomes_project 1 52892619 52896470 - MGP_129S1SvImJ_P0019829 Asnsd1 protein_coding protein_coding MGP_129S1SvImJ_T0019830.1 MGP_129S1SvImJ_G0016021.1 mouse_genomes_project 1 52894698 52897782 - Asnsd1 protein_coding retained_intron MGP_129S1SvImJ_T0012371.1 MGP_129S1SvImJ_G0010460.1 mouse_genomes_project 1 188670667 188671084 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100357.1 MGP_129S1SvImJ_G0038424.1 mouse_genomes_project 1 104038373 104038505 - Gm24122 snoRNA snoRNA MGP_129S1SvImJ_T0005952.1 MGP_129S1SvImJ_G0004992.1 mouse_genomes_project 1 153721200 153742420 + Gm29020 lincRNA lincRNA MGP_129S1SvImJ_T0100339.1 MGP_129S1SvImJ_G0038406.1 mouse_genomes_project 1 59684855 59684939 + Snord11 snoRNA snoRNA MGP_129S1SvImJ_T0100372.1 MGP_129S1SvImJ_G0038439.1 mouse_genomes_project 1 137194057 137194190 + Gm23939 snoRNA snoRNA MGP_129S1SvImJ_T0011811.1 MGP_129S1SvImJ_G0009925.1 mouse_genomes_project 1 180203446 180204496 + MGP_129S1SvImJ_P0011811 Olfr421-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0021097.1 MGP_129S1SvImJ_G0016259.1 mouse_genomes_project 1 88526566 88527726 + Chrnd protein_coding retained_intron MGP_129S1SvImJ_T0021098.1 MGP_129S1SvImJ_G0016259.1 mouse_genomes_project 1 88526596 88537519 + MGP_129S1SvImJ_P0021098 Chrnd protein_coding protein_coding MGP_129S1SvImJ_T0021099.1 MGP_129S1SvImJ_G0016259.1 mouse_genomes_project 1 88526803 88537518 + MGP_129S1SvImJ_P0021099 Chrnd protein_coding protein_coding MGP_129S1SvImJ_T0012359.1 MGP_129S1SvImJ_G0010448.1 mouse_genomes_project 1 183435963 183436280 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021859.1 MGP_129S1SvImJ_G0016424.1 mouse_genomes_project 1 131096099 131163416 + MGP_129S1SvImJ_P0021859 Rab3gap1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0021860.1 MGP_129S1SvImJ_G0016424.1 mouse_genomes_project 1 131096137 131163408 + MGP_129S1SvImJ_P0021860 Rab3gap1 protein_coding protein_coding MGP_129S1SvImJ_T0021861.1 MGP_129S1SvImJ_G0016424.1 mouse_genomes_project 1 131096166 131120115 + Rab3gap1 protein_coding retained_intron MGP_129S1SvImJ_T0021862.1 MGP_129S1SvImJ_G0016424.1 mouse_genomes_project 1 131117005 131122018 + Rab3gap1 protein_coding retained_intron MGP_129S1SvImJ_T0021863.1 MGP_129S1SvImJ_G0016424.1 mouse_genomes_project 1 131142801 131145997 + Rab3gap1 protein_coding retained_intron MGP_129S1SvImJ_T0021864.1 MGP_129S1SvImJ_G0016424.1 mouse_genomes_project 1 131157755 131162452 + Rab3gap1 protein_coding processed_transcript MGP_129S1SvImJ_T0009554.1 MGP_129S1SvImJ_G0007670.1 mouse_genomes_project 1 163610713 163610822 + Mir488 miRNA miRNA MGP_129S1SvImJ_T0012147.1 MGP_129S1SvImJ_G0010236.1 mouse_genomes_project 1 90161857 90162321 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012283.1 MGP_129S1SvImJ_G0010372.1 mouse_genomes_project 1 149346950 149348094 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020445.1 MGP_129S1SvImJ_G0016137.1 mouse_genomes_project 1 73398450 73416969 - MGP_129S1SvImJ_P0020445 Igfbp5 protein_coding protein_coding MGP_129S1SvImJ_T0020446.1 MGP_129S1SvImJ_G0016137.1 mouse_genomes_project 1 73398583 73416360 - Igfbp5 protein_coding processed_transcript MGP_129S1SvImJ_T0005673.1 MGP_129S1SvImJ_G0004774.1 mouse_genomes_project 1 10429969 10441542 + Gm29283 lincRNA lincRNA MGP_129S1SvImJ_T0023310.1 MGP_129S1SvImJ_G0016724.1 mouse_genomes_project 1 175661957 175803376 - MGP_129S1SvImJ_P0023310 Ddr2 protein_coding protein_coding MGP_129S1SvImJ_T0023311.1 MGP_129S1SvImJ_G0016724.1 mouse_genomes_project 1 175661958 175783264 - MGP_129S1SvImJ_P0023311 Ddr2 protein_coding protein_coding MGP_129S1SvImJ_T0023312.1 MGP_129S1SvImJ_G0016724.1 mouse_genomes_project 1 175667602 175803316 - MGP_129S1SvImJ_P0023312 Ddr2 protein_coding protein_coding MGP_129S1SvImJ_T0023313.1 MGP_129S1SvImJ_G0016724.1 mouse_genomes_project 1 175696789 175803544 - MGP_129S1SvImJ_P0023313 Ddr2 protein_coding protein_coding MGP_129S1SvImJ_T0023314.1 MGP_129S1SvImJ_G0016724.1 mouse_genomes_project 1 175727738 175803577 - Ddr2 protein_coding retained_intron MGP_129S1SvImJ_T0023315.1 MGP_129S1SvImJ_G0016724.1 mouse_genomes_project 1 175777975 175791602 - Ddr2 protein_coding processed_transcript MGP_129S1SvImJ_T0000409.1 MGP_129S1SvImJ_G0000351.1 mouse_genomes_project 1 10715561 10720134 - TEC TEC MGP_129S1SvImJ_T0000758.1 MGP_129S1SvImJ_G0000695.1 mouse_genomes_project 1 171355044 171357130 - TEC TEC MGP_129S1SvImJ_T0000622.1 MGP_129S1SvImJ_G0000561.1 mouse_genomes_project 1 126323546 126327056 - TEC TEC MGP_129S1SvImJ_T0017021.1 MGP_129S1SvImJ_G0015097.1 mouse_genomes_project 1 43432007 43433646 + Gm28893 processed_transcript processed_transcript MGP_129S1SvImJ_T0002950.1 MGP_129S1SvImJ_G0002777.1 mouse_genomes_project 1 167316070 167327668 + 2810442N19Rik antisense antisense MGP_129S1SvImJ_T0002951.1 MGP_129S1SvImJ_G0002777.1 mouse_genomes_project 1 167316273 167327677 + 2810442N19Rik antisense antisense MGP_129S1SvImJ_T0002942.1 MGP_129S1SvImJ_G0002770.1 mouse_genomes_project 1 163590189 163659226 - Gm37679 antisense antisense MGP_129S1SvImJ_T0022751.1 MGP_129S1SvImJ_G0016613.1 mouse_genomes_project 1 160186253 160341312 - MGP_129S1SvImJ_P0022751 Xpr1 protein_coding protein_coding MGP_129S1SvImJ_T0022752.1 MGP_129S1SvImJ_G0016613.1 mouse_genomes_project 1 160189534 160341390 - MGP_129S1SvImJ_P0022752 Xpr1 protein_coding protein_coding MGP_129S1SvImJ_T0022753.1 MGP_129S1SvImJ_G0016613.1 mouse_genomes_project 1 160192735 160228561 - Xpr1 protein_coding retained_intron MGP_129S1SvImJ_T0022754.1 MGP_129S1SvImJ_G0016613.1 mouse_genomes_project 1 160193220 160341398 - MGP_129S1SvImJ_P0022754 Xpr1 protein_coding protein_coding MGP_129S1SvImJ_T0022755.1 MGP_129S1SvImJ_G0016613.1 mouse_genomes_project 1 160201653 160204403 - Xpr1 protein_coding retained_intron MGP_129S1SvImJ_T0022756.1 MGP_129S1SvImJ_G0016613.1 mouse_genomes_project 1 160243332 160341378 - Xpr1 protein_coding retained_intron MGP_129S1SvImJ_T0022757.1 MGP_129S1SvImJ_G0016613.1 mouse_genomes_project 1 160302702 160305773 - Xpr1 protein_coding processed_transcript MGP_129S1SvImJ_T0022872.1 MGP_129S1SvImJ_G0016633.1 mouse_genomes_project 1 162556537 162621648 + MGP_129S1SvImJ_P0022872 Sec16b protein_coding protein_coding MGP_129S1SvImJ_T0022873.1 MGP_129S1SvImJ_G0016633.1 mouse_genomes_project 1 162556619 162621651 + MGP_129S1SvImJ_P0022873 Sec16b protein_coding protein_coding MGP_129S1SvImJ_T0022874.1 MGP_129S1SvImJ_G0016633.1 mouse_genomes_project 1 162576696 162621648 + MGP_129S1SvImJ_P0022874 Sec16b protein_coding protein_coding MGP_129S1SvImJ_T0022875.1 MGP_129S1SvImJ_G0016633.1 mouse_genomes_project 1 162584205 162615521 + MGP_129S1SvImJ_P0022875 Sec16b protein_coding protein_coding MGP_129S1SvImJ_T0022876.1 MGP_129S1SvImJ_G0016633.1 mouse_genomes_project 1 162589129 162596021 + Sec16b protein_coding retained_intron MGP_129S1SvImJ_T0024365.1 MGP_129S1SvImJ_G0016967.1 mouse_genomes_project 1 202218350 202267177 - MGP_129S1SvImJ_P0024365 Cd46 protein_coding protein_coding MGP_129S1SvImJ_T0024366.1 MGP_129S1SvImJ_G0016967.1 mouse_genomes_project 1 202223359 202237956 - Cd46 protein_coding retained_intron MGP_129S1SvImJ_T0024367.1 MGP_129S1SvImJ_G0016967.1 mouse_genomes_project 1 202223424 202267153 - MGP_129S1SvImJ_P0024367 Cd46 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024368.1 MGP_129S1SvImJ_G0016967.1 mouse_genomes_project 1 202223447 202255873 - Cd46 protein_coding retained_intron MGP_129S1SvImJ_T0020334.1 MGP_129S1SvImJ_G0016113.1 mouse_genomes_project 1 66736034 66961792 + MGP_129S1SvImJ_P0020334 Unc80 protein_coding protein_coding MGP_129S1SvImJ_T0020335.1 MGP_129S1SvImJ_G0016113.1 mouse_genomes_project 1 66736081 66774800 + MGP_129S1SvImJ_P0020335 Unc80 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020336.1 MGP_129S1SvImJ_G0016113.1 mouse_genomes_project 1 66736097 66753609 + Unc80 protein_coding retained_intron MGP_129S1SvImJ_T0020337.1 MGP_129S1SvImJ_G0016113.1 mouse_genomes_project 1 66736114 66961076 + MGP_129S1SvImJ_P0020337 Unc80 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0020338.1 MGP_129S1SvImJ_G0016113.1 mouse_genomes_project 1 66936022 66936600 + Unc80 protein_coding retained_intron MGP_129S1SvImJ_T0020339.1 MGP_129S1SvImJ_G0016113.1 mouse_genomes_project 1 66941969 66958575 + MGP_129S1SvImJ_P0020339 Unc80 protein_coding protein_coding MGP_129S1SvImJ_T0012210.1 MGP_129S1SvImJ_G0010299.1 mouse_genomes_project 1 114828862 114829531 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023905.1 MGP_129S1SvImJ_G0016873.1 mouse_genomes_project 1 187175711 187204803 + MGP_129S1SvImJ_P0023905 Acbd3 protein_coding protein_coding MGP_129S1SvImJ_T0023906.1 MGP_129S1SvImJ_G0016873.1 mouse_genomes_project 1 187179525 187184163 + Acbd3 protein_coding retained_intron MGP_129S1SvImJ_T0012056.1 MGP_129S1SvImJ_G0010145.1 mouse_genomes_project 1 55104401 55104749 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002874.1 MGP_129S1SvImJ_G0002719.1 mouse_genomes_project 1 94420505 94437433 - Gm29481 antisense antisense MGP_129S1SvImJ_T0017054.1 MGP_129S1SvImJ_G0015111.1 mouse_genomes_project 1 135951045 135963496 - 6030442K20Rik processed_transcript antisense MGP_129S1SvImJ_T0017055.1 MGP_129S1SvImJ_G0015111.1 mouse_genomes_project 1 135962508 135963515 - 6030442K20Rik processed_transcript retained_intron MGP_129S1SvImJ_T0000807.1 MGP_129S1SvImJ_G0000742.1 mouse_genomes_project 1 193113390 193114501 + TEC TEC MGP_129S1SvImJ_T0018958.1 MGP_129S1SvImJ_G0015842.1 mouse_genomes_project 1 10925824 10958289 - MGP_129S1SvImJ_P0018958 Tram1 protein_coding protein_coding MGP_129S1SvImJ_T0018959.1 MGP_129S1SvImJ_G0015842.1 mouse_genomes_project 1 10942702 10946355 - Tram1 protein_coding retained_intron MGP_129S1SvImJ_T0018960.1 MGP_129S1SvImJ_G0015842.1 mouse_genomes_project 1 10944676 10958258 - MGP_129S1SvImJ_P0018960 Tram1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0012384.1 MGP_129S1SvImJ_G0010473.1 mouse_genomes_project 1 196598428 196598569 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011939.1 MGP_129S1SvImJ_G0010028.1 mouse_genomes_project 1 19073078 19073274 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020112.1 MGP_129S1SvImJ_G0016072.1 mouse_genomes_project 1 60010502 60018939 - Ica1l protein_coding processed_transcript MGP_129S1SvImJ_T0020113.1 MGP_129S1SvImJ_G0016072.1 mouse_genomes_project 1 60017079 60078364 - MGP_129S1SvImJ_P0020113 Ica1l protein_coding protein_coding MGP_129S1SvImJ_T0020114.1 MGP_129S1SvImJ_G0016072.1 mouse_genomes_project 1 60017086 60078399 - MGP_129S1SvImJ_P0020114 Ica1l protein_coding protein_coding MGP_129S1SvImJ_T0020115.1 MGP_129S1SvImJ_G0016072.1 mouse_genomes_project 1 60019135 60060232 - MGP_129S1SvImJ_P0020115 Ica1l protein_coding protein_coding MGP_129S1SvImJ_T0020116.1 MGP_129S1SvImJ_G0016072.1 mouse_genomes_project 1 60047402 60054624 - Ica1l protein_coding retained_intron MGP_129S1SvImJ_T0020117.1 MGP_129S1SvImJ_G0016072.1 mouse_genomes_project 1 60052938 60078461 - Ica1l protein_coding processed_transcript MGP_129S1SvImJ_T0023793.1 MGP_129S1SvImJ_G0016855.1 mouse_genomes_project 1 184609946 184623453 - MGP_129S1SvImJ_P0023793 Hnrnpu protein_coding protein_coding MGP_129S1SvImJ_T0023794.1 MGP_129S1SvImJ_G0016855.1 mouse_genomes_project 1 184610435 184615924 - Hnrnpu protein_coding retained_intron MGP_129S1SvImJ_T0023795.1 MGP_129S1SvImJ_G0016855.1 mouse_genomes_project 1 184617469 184618530 - Hnrnpu protein_coding retained_intron MGP_129S1SvImJ_T0023796.1 MGP_129S1SvImJ_G0016855.1 mouse_genomes_project 1 184617706 184620150 - Hnrnpu protein_coding processed_transcript MGP_129S1SvImJ_T0023797.1 MGP_129S1SvImJ_G0016855.1 mouse_genomes_project 1 184621245 184622009 - Hnrnpu protein_coding retained_intron MGP_129S1SvImJ_T0018733.1 MGP_129S1SvImJ_G0015807.1 mouse_genomes_project 1 208290 218733 - Xkr4 protein_coding processed_transcript MGP_129S1SvImJ_T0018734.1 MGP_129S1SvImJ_G0015807.1 mouse_genomes_project 1 208913 218021 - Xkr4 protein_coding processed_transcript MGP_129S1SvImJ_T0018735.1 MGP_129S1SvImJ_G0015807.1 mouse_genomes_project 1 216870 667597 - MGP_129S1SvImJ_P0018735 Xkr4 protein_coding protein_coding MGP_129S1SvImJ_T0099143.1 MGP_129S1SvImJ_G0037210.1 mouse_genomes_project 1 184686899 184687005 + Gm24919 snRNA snRNA MGP_129S1SvImJ_T0021542.1 MGP_129S1SvImJ_G0016357.1 mouse_genomes_project 1 98809242 98884572 - MGP_129S1SvImJ_P0021542 Slco6c1 protein_coding protein_coding MGP_129S1SvImJ_T0021543.1 MGP_129S1SvImJ_G0016357.1 mouse_genomes_project 1 98809718 98884667 - MGP_129S1SvImJ_P0021543 Slco6c1 protein_coding protein_coding MGP_129S1SvImJ_T0011261.1 MGP_129S1SvImJ_G0009377.1 mouse_genomes_project 1 27426857 27426969 - Gm25586 misc_RNA misc_RNA MGP_129S1SvImJ_T0018946.1 MGP_129S1SvImJ_G0015840.1 mouse_genomes_project 1 10479814 10493035 - MGP_129S1SvImJ_P0018946 Prdm14 protein_coding protein_coding MGP_129S1SvImJ_T0005903.1 MGP_129S1SvImJ_G0004952.1 mouse_genomes_project 1 123669123 123678570 - Gm29348 lincRNA lincRNA MGP_129S1SvImJ_T0020517.1 MGP_129S1SvImJ_G0016150.1 mouse_genomes_project 1 74989893 74996734 + MGP_129S1SvImJ_P0020517 Ctdsp1 protein_coding protein_coding MGP_129S1SvImJ_T0020518.1 MGP_129S1SvImJ_G0016150.1 mouse_genomes_project 1 74990397 74996731 + Ctdsp1 protein_coding retained_intron MGP_129S1SvImJ_T0020519.1 MGP_129S1SvImJ_G0016150.1 mouse_genomes_project 1 74990764 74992672 + MGP_129S1SvImJ_P0020519 Ctdsp1 protein_coding protein_coding MGP_129S1SvImJ_T0000500.1 MGP_129S1SvImJ_G0000439.1 mouse_genomes_project 1 54612086 54614836 - TEC TEC MGP_129S1SvImJ_T0020109.1 MGP_129S1SvImJ_G0016071.1 mouse_genomes_project 1 59937069 60013359 + MGP_129S1SvImJ_P0020109 Fam117b protein_coding protein_coding MGP_129S1SvImJ_T0020110.1 MGP_129S1SvImJ_G0016071.1 mouse_genomes_project 1 59998697 60009528 + MGP_129S1SvImJ_P0020110 Fam117b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020111.1 MGP_129S1SvImJ_G0016071.1 mouse_genomes_project 1 60007193 60008951 + Fam117b protein_coding retained_intron MGP_129S1SvImJ_T0020925.1 MGP_129S1SvImJ_G0016220.1 mouse_genomes_project 1 83766337 83829944 + MGP_129S1SvImJ_P0020925 Agfg1 protein_coding protein_coding MGP_129S1SvImJ_T0020926.1 MGP_129S1SvImJ_G0016220.1 mouse_genomes_project 1 83766351 83825143 + MGP_129S1SvImJ_P0020926 Agfg1 protein_coding protein_coding MGP_129S1SvImJ_T0020927.1 MGP_129S1SvImJ_G0016220.1 mouse_genomes_project 1 83766523 83825143 + MGP_129S1SvImJ_P0020927 Agfg1 protein_coding protein_coding MGP_129S1SvImJ_T0020928.1 MGP_129S1SvImJ_G0016220.1 mouse_genomes_project 1 83766525 83825041 + MGP_129S1SvImJ_P0020928 Agfg1 protein_coding protein_coding MGP_129S1SvImJ_T0020929.1 MGP_129S1SvImJ_G0016220.1 mouse_genomes_project 1 83766528 83824283 + MGP_129S1SvImJ_P0020929 Agfg1 protein_coding protein_coding MGP_129S1SvImJ_T0020930.1 MGP_129S1SvImJ_G0016220.1 mouse_genomes_project 1 83766528 83824437 + MGP_129S1SvImJ_P0020930 Agfg1 protein_coding protein_coding MGP_129S1SvImJ_T0020931.1 MGP_129S1SvImJ_G0016220.1 mouse_genomes_project 1 83766588 83823884 + MGP_129S1SvImJ_P0020931 Agfg1 protein_coding protein_coding MGP_129S1SvImJ_T0020932.1 MGP_129S1SvImJ_G0016220.1 mouse_genomes_project 1 83766927 83809087 + MGP_129S1SvImJ_P0020932 Agfg1 protein_coding protein_coding MGP_129S1SvImJ_T0012370.1 MGP_129S1SvImJ_G0010459.1 mouse_genomes_project 1 187926092 187926385 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019928.1 MGP_129S1SvImJ_G0016041.1 mouse_genomes_project 1 57224102 57237214 + MGP_129S1SvImJ_P0019928 9430016H08Rik protein_coding protein_coding MGP_129S1SvImJ_T0022265.1 MGP_129S1SvImJ_G0016514.1 mouse_genomes_project 1 138686115 138699245 + MGP_129S1SvImJ_P0022265 Ube2t protein_coding protein_coding MGP_129S1SvImJ_T0022266.1 MGP_129S1SvImJ_G0016514.1 mouse_genomes_project 1 138686141 138689626 + Ube2t protein_coding retained_intron MGP_129S1SvImJ_T0022267.1 MGP_129S1SvImJ_G0016514.1 mouse_genomes_project 1 138695062 138699242 + MGP_129S1SvImJ_P0022267 Ube2t protein_coding protein_coding MGP_129S1SvImJ_T0022268.1 MGP_129S1SvImJ_G0016514.1 mouse_genomes_project 1 138697036 138697938 + Ube2t protein_coding retained_intron MGP_129S1SvImJ_T0011905.1 MGP_129S1SvImJ_G0009994.1 mouse_genomes_project 1 6757600 6759040 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019085.1 MGP_129S1SvImJ_G0015876.1 mouse_genomes_project 1 18853319 18866274 + MGP_129S1SvImJ_P0019085 Tmem14a protein_coding protein_coding MGP_129S1SvImJ_T0011933.1 MGP_129S1SvImJ_G0010022.1 mouse_genomes_project 1 16948118 16950360 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021898.1 MGP_129S1SvImJ_G0016430.1 mouse_genomes_project 1 131606210 131677125 - MGP_129S1SvImJ_P0021898 Dars protein_coding protein_coding MGP_129S1SvImJ_T0021899.1 MGP_129S1SvImJ_G0016430.1 mouse_genomes_project 1 131617717 131622001 - Dars protein_coding retained_intron MGP_129S1SvImJ_T0021900.1 MGP_129S1SvImJ_G0016430.1 mouse_genomes_project 1 131665164 131677134 - MGP_129S1SvImJ_P0021900 Dars protein_coding protein_coding MGP_129S1SvImJ_T0099118.1 MGP_129S1SvImJ_G0037185.1 mouse_genomes_project 1 139118933 139119039 - Gm22796 snRNA snRNA MGP_129S1SvImJ_T0011927.1 MGP_129S1SvImJ_G0010016.1 mouse_genomes_project 1 15568637 15572307 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000480.1 MGP_129S1SvImJ_G0000419.1 mouse_genomes_project 1 37698622 37700258 + TEC TEC MGP_129S1SvImJ_T0000690.1 MGP_129S1SvImJ_G0000627.1 mouse_genomes_project 1 145561727 145562930 + TEC TEC MGP_129S1SvImJ_T0018979.1 MGP_129S1SvImJ_G0015849.1 mouse_genomes_project 1 12736170 13177952 + MGP_129S1SvImJ_P0018979 Kcnb2 protein_coding protein_coding MGP_129S1SvImJ_T0018980.1 MGP_129S1SvImJ_G0015849.1 mouse_genomes_project 1 12763656 13189146 + MGP_129S1SvImJ_P0018980 Kcnb2 protein_coding protein_coding MGP_129S1SvImJ_T0019634.1 MGP_129S1SvImJ_G0015986.1 mouse_genomes_project 1 43126111 43143221 - MGP_129S1SvImJ_P0019634 Tex30 protein_coding protein_coding MGP_129S1SvImJ_T0019635.1 MGP_129S1SvImJ_G0015986.1 mouse_genomes_project 1 43126114 43143268 - MGP_129S1SvImJ_P0019635 Tex30 protein_coding protein_coding MGP_129S1SvImJ_T0019636.1 MGP_129S1SvImJ_G0015986.1 mouse_genomes_project 1 43126308 43143192 - MGP_129S1SvImJ_P0019636 Tex30 protein_coding protein_coding MGP_129S1SvImJ_T0019637.1 MGP_129S1SvImJ_G0015986.1 mouse_genomes_project 1 43126308 43143173 - MGP_129S1SvImJ_P0019637 Tex30 protein_coding protein_coding MGP_129S1SvImJ_T0019638.1 MGP_129S1SvImJ_G0015986.1 mouse_genomes_project 1 43126358 43143253 - MGP_129S1SvImJ_P0019638 Tex30 protein_coding protein_coding MGP_129S1SvImJ_T0019639.1 MGP_129S1SvImJ_G0015986.1 mouse_genomes_project 1 43126359 43143271 - MGP_129S1SvImJ_P0019639 Tex30 protein_coding protein_coding MGP_129S1SvImJ_T0019640.1 MGP_129S1SvImJ_G0015986.1 mouse_genomes_project 1 43126360 43142500 - MGP_129S1SvImJ_P0019640 Tex30 protein_coding protein_coding MGP_129S1SvImJ_T0019641.1 MGP_129S1SvImJ_G0015986.1 mouse_genomes_project 1 43126527 43143263 - MGP_129S1SvImJ_P0019641 Tex30 protein_coding protein_coding MGP_129S1SvImJ_T0019642.1 MGP_129S1SvImJ_G0015986.1 mouse_genomes_project 1 43127399 43143231 - MGP_129S1SvImJ_P0019642 Tex30 protein_coding protein_coding MGP_129S1SvImJ_T0019643.1 MGP_129S1SvImJ_G0015986.1 mouse_genomes_project 1 43127515 43142843 - MGP_129S1SvImJ_P0019643 Tex30 protein_coding protein_coding MGP_129S1SvImJ_T0019644.1 MGP_129S1SvImJ_G0015986.1 mouse_genomes_project 1 43128001 43143244 - MGP_129S1SvImJ_P0019644 Tex30 protein_coding protein_coding MGP_129S1SvImJ_T0019645.1 MGP_129S1SvImJ_G0015986.1 mouse_genomes_project 1 43128007 43143267 - MGP_129S1SvImJ_P0019645 Tex30 protein_coding protein_coding MGP_129S1SvImJ_T0019646.1 MGP_129S1SvImJ_G0015986.1 mouse_genomes_project 1 43128013 43140827 - MGP_129S1SvImJ_P0019646 Tex30 protein_coding protein_coding MGP_129S1SvImJ_T0000779.1 MGP_129S1SvImJ_G0000716.1 mouse_genomes_project 1 183294756 183296049 - TEC TEC MGP_129S1SvImJ_T0012215.1 MGP_129S1SvImJ_G0010304.1 mouse_genomes_project 1 117730617 117731191 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100317.1 MGP_129S1SvImJ_G0038384.1 mouse_genomes_project 1 18469923 18470056 - Gm24723 snoRNA snoRNA MGP_129S1SvImJ_T0005986.1 MGP_129S1SvImJ_G0005017.1 mouse_genomes_project 1 169009396 169012289 + Gm29500 lincRNA lincRNA MGP_129S1SvImJ_T0011961.1 MGP_129S1SvImJ_G0010050.1 mouse_genomes_project 1 28984045 28984373 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012173.1 MGP_129S1SvImJ_G0010262.1 mouse_genomes_project 1 103270014 103270462 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000778.1 MGP_129S1SvImJ_G0000715.1 mouse_genomes_project 1 183232874 183234175 - TEC TEC MGP_129S1SvImJ_T0005901.1 MGP_129S1SvImJ_G0004950.1 mouse_genomes_project 1 123573565 123578688 + Gm29346 lincRNA lincRNA MGP_129S1SvImJ_T0012378.1 MGP_129S1SvImJ_G0010467.1 mouse_genomes_project 1 191368574 191370114 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011912.1 MGP_129S1SvImJ_G0010001.1 mouse_genomes_project 1 8922600 8922862 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019527.1 MGP_129S1SvImJ_G0015963.1 mouse_genomes_project 1 38670238 38805652 + MGP_129S1SvImJ_P0019527 Map4k4 protein_coding protein_coding MGP_129S1SvImJ_T0019528.1 MGP_129S1SvImJ_G0015963.1 mouse_genomes_project 1 38670238 38805652 + MGP_129S1SvImJ_P0019528 Map4k4 protein_coding protein_coding MGP_129S1SvImJ_T0019529.1 MGP_129S1SvImJ_G0015963.1 mouse_genomes_project 1 38670495 38671782 + Map4k4 protein_coding retained_intron MGP_129S1SvImJ_T0019530.1 MGP_129S1SvImJ_G0015963.1 mouse_genomes_project 1 38670495 38767739 + MGP_129S1SvImJ_P0019530 Map4k4 protein_coding protein_coding MGP_129S1SvImJ_T0019531.1 MGP_129S1SvImJ_G0015963.1 mouse_genomes_project 1 38670504 38804096 + MGP_129S1SvImJ_P0019531 Map4k4 protein_coding protein_coding MGP_129S1SvImJ_T0019532.1 MGP_129S1SvImJ_G0015963.1 mouse_genomes_project 1 38670504 38804096 + MGP_129S1SvImJ_P0019532 Map4k4 protein_coding protein_coding MGP_129S1SvImJ_T0019533.1 MGP_129S1SvImJ_G0015963.1 mouse_genomes_project 1 38670505 38804096 + MGP_129S1SvImJ_P0019533 Map4k4 protein_coding protein_coding MGP_129S1SvImJ_T0019534.1 MGP_129S1SvImJ_G0015963.1 mouse_genomes_project 1 38670549 38804311 + MGP_129S1SvImJ_P0019534 Map4k4 protein_coding protein_coding MGP_129S1SvImJ_T0019535.1 MGP_129S1SvImJ_G0015963.1 mouse_genomes_project 1 38670555 38804267 + MGP_129S1SvImJ_P0019535 Map4k4 protein_coding protein_coding MGP_129S1SvImJ_T0019536.1 MGP_129S1SvImJ_G0015963.1 mouse_genomes_project 1 38734151 38758776 + Map4k4 protein_coding processed_transcript MGP_129S1SvImJ_T0019537.1 MGP_129S1SvImJ_G0015963.1 mouse_genomes_project 1 38734846 38752364 + Map4k4 protein_coding processed_transcript MGP_129S1SvImJ_T0019538.1 MGP_129S1SvImJ_G0015963.1 mouse_genomes_project 1 38778866 38779833 + Map4k4 protein_coding retained_intron MGP_129S1SvImJ_T0019539.1 MGP_129S1SvImJ_G0015963.1 mouse_genomes_project 1 38779164 38786020 + MGP_129S1SvImJ_P0019539 Map4k4 protein_coding protein_coding MGP_129S1SvImJ_T0019540.1 MGP_129S1SvImJ_G0015963.1 mouse_genomes_project 1 38779165 38784182 + MGP_129S1SvImJ_P0019540 Map4k4 protein_coding protein_coding MGP_129S1SvImJ_T0019541.1 MGP_129S1SvImJ_G0015963.1 mouse_genomes_project 1 38779948 38789935 + MGP_129S1SvImJ_P0019541 Map4k4 protein_coding protein_coding MGP_129S1SvImJ_T0019542.1 MGP_129S1SvImJ_G0015963.1 mouse_genomes_project 1 38786670 38788607 + Map4k4 protein_coding retained_intron MGP_129S1SvImJ_T0019543.1 MGP_129S1SvImJ_G0015963.1 mouse_genomes_project 1 38793195 38794042 + Map4k4 protein_coding retained_intron MGP_129S1SvImJ_T0019544.1 MGP_129S1SvImJ_G0015963.1 mouse_genomes_project 1 38802553 38803767 + Map4k4 protein_coding retained_intron MGP_129S1SvImJ_T0012019.1 MGP_129S1SvImJ_G0010108.1 mouse_genomes_project 1 44909427 44913122 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024171.1 MGP_129S1SvImJ_G0016930.1 mouse_genomes_project 1 196816857 196861127 - MGP_129S1SvImJ_P0024171 Smyd2 protein_coding protein_coding MGP_129S1SvImJ_T0024172.1 MGP_129S1SvImJ_G0016930.1 mouse_genomes_project 1 196816859 196825368 - Smyd2 protein_coding processed_transcript MGP_129S1SvImJ_T0024173.1 MGP_129S1SvImJ_G0016930.1 mouse_genomes_project 1 196817007 196818738 - Smyd2 protein_coding retained_intron MGP_129S1SvImJ_T0024174.1 MGP_129S1SvImJ_G0016930.1 mouse_genomes_project 1 196821411 196861017 - Smyd2 protein_coding retained_intron MGP_129S1SvImJ_T0023939.1 MGP_129S1SvImJ_G0016883.1 mouse_genomes_project 1 187651210 187669167 + MGP_129S1SvImJ_P0023939 Cnih4 protein_coding protein_coding MGP_129S1SvImJ_T0023940.1 MGP_129S1SvImJ_G0016883.1 mouse_genomes_project 1 187651272 187669167 + MGP_129S1SvImJ_P0023940 Cnih4 protein_coding protein_coding MGP_129S1SvImJ_T0023941.1 MGP_129S1SvImJ_G0016883.1 mouse_genomes_project 1 187655017 187666554 + Cnih4 protein_coding processed_transcript MGP_129S1SvImJ_T0023942.1 MGP_129S1SvImJ_G0016883.1 mouse_genomes_project 1 187655999 187666522 + Cnih4 protein_coding retained_intron MGP_129S1SvImJ_T0000588.1 MGP_129S1SvImJ_G0000527.1 mouse_genomes_project 1 92017218 92020049 + TEC TEC MGP_129S1SvImJ_T0019351.1 MGP_129S1SvImJ_G0015929.1 mouse_genomes_project 1 35101196 35233814 - MGP_129S1SvImJ_P0019351 Fam178b protein_coding protein_coding MGP_129S1SvImJ_T0019352.1 MGP_129S1SvImJ_G0015929.1 mouse_genomes_project 1 35101200 35133214 - Fam178b protein_coding processed_transcript MGP_129S1SvImJ_T0019353.1 MGP_129S1SvImJ_G0015929.1 mouse_genomes_project 1 35101200 35129199 - Fam178b protein_coding processed_transcript MGP_129S1SvImJ_T0019354.1 MGP_129S1SvImJ_G0015929.1 mouse_genomes_project 1 35101200 35140299 - MGP_129S1SvImJ_P0019354 Fam178b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019355.1 MGP_129S1SvImJ_G0015929.1 mouse_genomes_project 1 35102832 35140842 - MGP_129S1SvImJ_P0019355 Fam178b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019356.1 MGP_129S1SvImJ_G0015929.1 mouse_genomes_project 1 35103371 35127569 - Fam178b protein_coding processed_transcript MGP_129S1SvImJ_T0019357.1 MGP_129S1SvImJ_G0015929.1 mouse_genomes_project 1 35114959 35140320 - Fam178b protein_coding processed_transcript MGP_129S1SvImJ_T0019358.1 MGP_129S1SvImJ_G0015929.1 mouse_genomes_project 1 35139863 35233814 - MGP_129S1SvImJ_P0019358 Fam178b protein_coding protein_coding MGP_129S1SvImJ_T0024149.1 MGP_129S1SvImJ_G0016927.1 mouse_genomes_project 1 196096633 196248232 - MGP_129S1SvImJ_P0024149 Kcnk2 protein_coding protein_coding MGP_129S1SvImJ_T0024150.1 MGP_129S1SvImJ_G0016927.1 mouse_genomes_project 1 196096640 196247872 - MGP_129S1SvImJ_P0024150 Kcnk2 protein_coding protein_coding MGP_129S1SvImJ_T0024151.1 MGP_129S1SvImJ_G0016927.1 mouse_genomes_project 1 196096640 196305350 - MGP_129S1SvImJ_P0024151 Kcnk2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024152.1 MGP_129S1SvImJ_G0016927.1 mouse_genomes_project 1 196098447 196305295 - MGP_129S1SvImJ_P0024152 Kcnk2 protein_coding protein_coding MGP_129S1SvImJ_T0024153.1 MGP_129S1SvImJ_G0016927.1 mouse_genomes_project 1 196098456 196305290 - MGP_129S1SvImJ_P0024153 Kcnk2 protein_coding protein_coding MGP_129S1SvImJ_T0024154.1 MGP_129S1SvImJ_G0016927.1 mouse_genomes_project 1 196098493 196247747 - MGP_129S1SvImJ_P0024154 Kcnk2 protein_coding protein_coding MGP_129S1SvImJ_T0024155.1 MGP_129S1SvImJ_G0016927.1 mouse_genomes_project 1 196098493 196247395 - MGP_129S1SvImJ_P0024155 Kcnk2 protein_coding protein_coding MGP_129S1SvImJ_T0024156.1 MGP_129S1SvImJ_G0016927.1 mouse_genomes_project 1 196098728 196103924 - Kcnk2 protein_coding processed_transcript MGP_129S1SvImJ_T0024157.1 MGP_129S1SvImJ_G0016927.1 mouse_genomes_project 1 196098765 196137042 - Kcnk2 protein_coding processed_transcript MGP_129S1SvImJ_T0024158.1 MGP_129S1SvImJ_G0016927.1 mouse_genomes_project 1 196243889 196251019 - Kcnk2 protein_coding processed_transcript MGP_129S1SvImJ_T0012320.1 MGP_129S1SvImJ_G0010409.1 mouse_genomes_project 1 164298282 164298765 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012248.1 MGP_129S1SvImJ_G0010337.1 mouse_genomes_project 1 131354847 131355327 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005757.1 MGP_129S1SvImJ_G0004835.1 mouse_genomes_project 1 56307488 56309541 + Gm28240 lincRNA lincRNA MGP_129S1SvImJ_T0012107.1 MGP_129S1SvImJ_G0010196.1 mouse_genomes_project 1 71461170 71461549 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002863.1 MGP_129S1SvImJ_G0002708.1 mouse_genomes_project 1 83311700 83314538 - antisense antisense MGP_129S1SvImJ_T0002881.1 MGP_129S1SvImJ_G0002726.1 mouse_genomes_project 1 98602032 98642123 + Panct2 antisense antisense MGP_129S1SvImJ_T0002882.1 MGP_129S1SvImJ_G0002726.1 mouse_genomes_project 1 98603127 98614291 + Panct2 antisense antisense MGP_129S1SvImJ_T0002883.1 MGP_129S1SvImJ_G0002726.1 mouse_genomes_project 1 98603139 98609306 + Panct2 antisense antisense MGP_129S1SvImJ_T0019430.1 MGP_129S1SvImJ_G0015941.1 mouse_genomes_project 1 36396425 36513521 - MGP_129S1SvImJ_P0019430 Tsga10 protein_coding protein_coding MGP_129S1SvImJ_T0019431.1 MGP_129S1SvImJ_G0015941.1 mouse_genomes_project 1 36402533 36503816 - MGP_129S1SvImJ_P0019431 Tsga10 protein_coding protein_coding MGP_129S1SvImJ_T0019432.1 MGP_129S1SvImJ_G0015941.1 mouse_genomes_project 1 36402533 36514871 - MGP_129S1SvImJ_P0019432 Tsga10 protein_coding protein_coding MGP_129S1SvImJ_T0019433.1 MGP_129S1SvImJ_G0015941.1 mouse_genomes_project 1 36444456 36503789 - MGP_129S1SvImJ_P0019433 Tsga10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019434.1 MGP_129S1SvImJ_G0015941.1 mouse_genomes_project 1 36479679 36513278 - MGP_129S1SvImJ_P0019434 Tsga10 protein_coding protein_coding MGP_129S1SvImJ_T0019435.1 MGP_129S1SvImJ_G0015941.1 mouse_genomes_project 1 36480711 36513515 - MGP_129S1SvImJ_P0019435 Tsga10 protein_coding protein_coding MGP_129S1SvImJ_T0019436.1 MGP_129S1SvImJ_G0015941.1 mouse_genomes_project 1 36481547 36513515 - MGP_129S1SvImJ_P0019436 Tsga10 protein_coding protein_coding MGP_129S1SvImJ_T0019437.1 MGP_129S1SvImJ_G0015941.1 mouse_genomes_project 1 36488484 36492144 - Tsga10 protein_coding retained_intron MGP_129S1SvImJ_T0100312.1 MGP_129S1SvImJ_G0038379.1 mouse_genomes_project 1 13148683 13148795 - Gm25227 snoRNA snoRNA MGP_129S1SvImJ_T0000792.1 MGP_129S1SvImJ_G0000728.1 mouse_genomes_project 1 187906248 187907559 + TEC TEC MGP_129S1SvImJ_T0000501.1 MGP_129S1SvImJ_G0000440.1 mouse_genomes_project 1 54761590 54763384 - TEC TEC MGP_129S1SvImJ_T0009547.1 MGP_129S1SvImJ_G0007663.1 mouse_genomes_project 1 141968327 141968414 + Mir181a-1 miRNA miRNA MGP_129S1SvImJ_T0098788.1 MGP_129S1SvImJ_G0036872.1 mouse_genomes_project 1 139176505 139181099 - Gm28277 sense_intronic sense_intronic MGP_129S1SvImJ_T0000688.1 MGP_129S1SvImJ_G0000625.1 mouse_genomes_project 1 143205819 143208450 + TEC TEC MGP_129S1SvImJ_T0012200.1 MGP_129S1SvImJ_G0010289.1 mouse_genomes_project 1 112682331 112682869 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002936.1 MGP_129S1SvImJ_G0002764.1 mouse_genomes_project 1 158587639 158593411 - Gm28513 antisense antisense MGP_129S1SvImJ_T0017109.1 MGP_129S1SvImJ_G0015122.1 mouse_genomes_project 1 171286761 171295054 + Gm16565 processed_transcript sense_overlapping MGP_129S1SvImJ_T0017110.1 MGP_129S1SvImJ_G0015122.1 mouse_genomes_project 1 171286885 171287854 + Gm16565 processed_transcript processed_transcript MGP_129S1SvImJ_T0011284.1 MGP_129S1SvImJ_G0009400.1 mouse_genomes_project 1 202025472 202025766 + Gm23885 misc_RNA misc_RNA MGP_129S1SvImJ_T0100311.1 MGP_129S1SvImJ_G0038378.1 mouse_genomes_project 1 12477354 12477474 - Gm26345 snoRNA snoRNA MGP_129S1SvImJ_T0006054.1 MGP_129S1SvImJ_G0005069.1 mouse_genomes_project 1 191793764 191799002 + 4930433J02Rik lincRNA lincRNA MGP_129S1SvImJ_T0098421.1 MGP_129S1SvImJ_G0036506.1 mouse_genomes_project 1 106978460 106978572 - n-R5s216 rRNA rRNA MGP_129S1SvImJ_T0000530.1 MGP_129S1SvImJ_G0000469.1 mouse_genomes_project 1 67070129 67072310 + TEC TEC MGP_129S1SvImJ_T0005799.1 MGP_129S1SvImJ_G0004869.1 mouse_genomes_project 1 72727398 72765087 + D230017M19Rik lincRNA lincRNA MGP_129S1SvImJ_T0005800.1 MGP_129S1SvImJ_G0004869.1 mouse_genomes_project 1 72736389 72773601 + D230017M19Rik lincRNA lincRNA MGP_129S1SvImJ_T0005801.1 MGP_129S1SvImJ_G0004869.1 mouse_genomes_project 1 72763643 72766124 + D230017M19Rik lincRNA lincRNA MGP_129S1SvImJ_T0005701.1 MGP_129S1SvImJ_G0004800.1 mouse_genomes_project 1 34477190 34481604 - Gm37146 lincRNA lincRNA MGP_129S1SvImJ_T0000668.1 MGP_129S1SvImJ_G0000606.1 mouse_genomes_project 1 139853939 139856193 + TEC TEC MGP_129S1SvImJ_T0020871.1 MGP_129S1SvImJ_G0016210.1 mouse_genomes_project 1 81076096 81155573 - MGP_129S1SvImJ_P0020871 Cul3 protein_coding protein_coding MGP_129S1SvImJ_T0020872.1 MGP_129S1SvImJ_G0016210.1 mouse_genomes_project 1 81077996 81155404 - MGP_129S1SvImJ_P0020872 Cul3 protein_coding protein_coding MGP_129S1SvImJ_T0020873.1 MGP_129S1SvImJ_G0016210.1 mouse_genomes_project 1 81078120 81088604 - MGP_129S1SvImJ_P0020873 Cul3 protein_coding protein_coding MGP_129S1SvImJ_T0020874.1 MGP_129S1SvImJ_G0016210.1 mouse_genomes_project 1 81078329 81155404 - MGP_129S1SvImJ_P0020874 Cul3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0020875.1 MGP_129S1SvImJ_G0016210.1 mouse_genomes_project 1 81078415 81087727 - Cul3 protein_coding retained_intron MGP_129S1SvImJ_T0020876.1 MGP_129S1SvImJ_G0016210.1 mouse_genomes_project 1 81098213 81155400 - MGP_129S1SvImJ_P0020876 Cul3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020877.1 MGP_129S1SvImJ_G0016210.1 mouse_genomes_project 1 81101833 81155372 - MGP_129S1SvImJ_P0020877 Cul3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0000587.1 MGP_129S1SvImJ_G0000526.1 mouse_genomes_project 1 91706462 91707821 - TEC TEC MGP_129S1SvImJ_T0021583.1 MGP_129S1SvImJ_G0016364.1 mouse_genomes_project 1 106857220 107095226 + MGP_129S1SvImJ_P0021583 Cdh20 protein_coding protein_coding MGP_129S1SvImJ_T0000806.1 MGP_129S1SvImJ_G0000741.1 mouse_genomes_project 1 192927519 192928007 + TEC TEC MGP_129S1SvImJ_T0012154.1 MGP_129S1SvImJ_G0010243.1 mouse_genomes_project 1 93023025 93025303 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100403.1 MGP_129S1SvImJ_G0038470.1 mouse_genomes_project 1 195486105 195486236 - Gm25095 snoRNA snoRNA MGP_129S1SvImJ_T0100367.1 MGP_129S1SvImJ_G0038434.1 mouse_genomes_project 1 125471787 125471931 + Gm25771 snoRNA snoRNA MGP_129S1SvImJ_T0002866.1 MGP_129S1SvImJ_G0002711.1 mouse_genomes_project 1 87553002 87553867 - Gm28626 antisense antisense MGP_129S1SvImJ_T0023987.1 MGP_129S1SvImJ_G0016892.1 mouse_genomes_project 1 188896723 188904745 - MGP_129S1SvImJ_P0023987 Degs1 protein_coding protein_coding MGP_129S1SvImJ_T0023988.1 MGP_129S1SvImJ_G0016892.1 mouse_genomes_project 1 188900437 188904745 - Degs1 protein_coding retained_intron MGP_129S1SvImJ_T0023989.1 MGP_129S1SvImJ_G0016892.1 mouse_genomes_project 1 188900944 188904165 - MGP_129S1SvImJ_P0023989 Degs1 protein_coding protein_coding MGP_129S1SvImJ_T0019714.1 MGP_129S1SvImJ_G0016002.1 mouse_genomes_project 1 50788534 50802147 + MGP_129S1SvImJ_P0019714 Sdpr protein_coding protein_coding MGP_129S1SvImJ_T0023419.1 MGP_129S1SvImJ_G0016750.1 mouse_genomes_project 1 177034440 177046766 + MGP_129S1SvImJ_P0023419 Adamts4 protein_coding protein_coding MGP_129S1SvImJ_T0023420.1 MGP_129S1SvImJ_G0016750.1 mouse_genomes_project 1 177036128 177046766 + MGP_129S1SvImJ_P0023420 Adamts4 protein_coding protein_coding MGP_129S1SvImJ_T0005884.1 MGP_129S1SvImJ_G0004938.1 mouse_genomes_project 1 110160365 110188620 + D830032E09Rik lincRNA lincRNA MGP_129S1SvImJ_T0005885.1 MGP_129S1SvImJ_G0004938.1 mouse_genomes_project 1 110160391 110188633 + D830032E09Rik lincRNA lincRNA MGP_129S1SvImJ_T0005886.1 MGP_129S1SvImJ_G0004938.1 mouse_genomes_project 1 110174380 110285857 + D830032E09Rik lincRNA lincRNA MGP_129S1SvImJ_T0002981.1 MGP_129S1SvImJ_G0002801.1 mouse_genomes_project 1 184597991 184604044 - B230369F24Rik antisense antisense MGP_129S1SvImJ_T0022189.1 MGP_129S1SvImJ_G0016497.1 mouse_genomes_project 1 137719779 137723728 - MGP_129S1SvImJ_P0022189 Btg2 protein_coding protein_coding MGP_129S1SvImJ_T0011918.1 MGP_129S1SvImJ_G0010007.1 mouse_genomes_project 1 13231828 13231928 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011908.1 MGP_129S1SvImJ_G0009997.1 mouse_genomes_project 1 7847594 7848234 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019311.1 MGP_129S1SvImJ_G0015921.1 mouse_genomes_project 1 34861093 34896916 - MGP_129S1SvImJ_P0019311 Kansl3 protein_coding protein_coding MGP_129S1SvImJ_T0019312.1 MGP_129S1SvImJ_G0015921.1 mouse_genomes_project 1 34861093 34896892 - MGP_129S1SvImJ_P0019312 Kansl3 protein_coding protein_coding MGP_129S1SvImJ_T0019313.1 MGP_129S1SvImJ_G0015921.1 mouse_genomes_project 1 34862936 34896906 - MGP_129S1SvImJ_P0019313 Kansl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019314.1 MGP_129S1SvImJ_G0015921.1 mouse_genomes_project 1 34862936 34895749 - MGP_129S1SvImJ_P0019314 Kansl3 protein_coding protein_coding MGP_129S1SvImJ_T0019315.1 MGP_129S1SvImJ_G0015921.1 mouse_genomes_project 1 34879548 34895776 - MGP_129S1SvImJ_P0019315 Kansl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019316.1 MGP_129S1SvImJ_G0015921.1 mouse_genomes_project 1 34884304 34896890 - MGP_129S1SvImJ_P0019316 Kansl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019317.1 MGP_129S1SvImJ_G0015921.1 mouse_genomes_project 1 34893362 34895776 - MGP_129S1SvImJ_P0019317 Kansl3 protein_coding protein_coding MGP_129S1SvImJ_T0019318.1 MGP_129S1SvImJ_G0015921.1 mouse_genomes_project 1 34893645 34896892 - Kansl3 protein_coding retained_intron MGP_129S1SvImJ_T0019319.1 MGP_129S1SvImJ_G0015921.1 mouse_genomes_project 1 34895700 34896837 - MGP_129S1SvImJ_P0019319 Kansl3 protein_coding protein_coding MGP_129S1SvImJ_T0021212.1 MGP_129S1SvImJ_G0016282.1 mouse_genomes_project 1 89615531 89628377 + MGP_129S1SvImJ_P0021212 protein_coding protein_coding MGP_129S1SvImJ_T0002937.1 MGP_129S1SvImJ_G0002765.1 mouse_genomes_project 1 160139536 160141392 + Gm37622 antisense antisense MGP_129S1SvImJ_T0018770.1 MGP_129S1SvImJ_G0015815.1 mouse_genomes_project 1 2111510 2199994 + MGP_129S1SvImJ_P0018770 Atp6v1h protein_coding protein_coding MGP_129S1SvImJ_T0018771.1 MGP_129S1SvImJ_G0015815.1 mouse_genomes_project 1 2123691 2200183 + MGP_129S1SvImJ_P0018771 Atp6v1h protein_coding protein_coding MGP_129S1SvImJ_T0018772.1 MGP_129S1SvImJ_G0015815.1 mouse_genomes_project 1 2123721 2136971 + MGP_129S1SvImJ_P0018772 Atp6v1h protein_coding protein_coding MGP_129S1SvImJ_T0018773.1 MGP_129S1SvImJ_G0015815.1 mouse_genomes_project 1 2123735 2182850 + Atp6v1h protein_coding retained_intron MGP_129S1SvImJ_T0018774.1 MGP_129S1SvImJ_G0015815.1 mouse_genomes_project 1 2123743 2127432 + Atp6v1h protein_coding retained_intron MGP_129S1SvImJ_T0018775.1 MGP_129S1SvImJ_G0015815.1 mouse_genomes_project 1 2123743 2136902 + MGP_129S1SvImJ_P0018775 Atp6v1h protein_coding protein_coding MGP_129S1SvImJ_T0018776.1 MGP_129S1SvImJ_G0015815.1 mouse_genomes_project 1 2123765 2200073 + MGP_129S1SvImJ_P0018776 Atp6v1h protein_coding protein_coding MGP_129S1SvImJ_T0018777.1 MGP_129S1SvImJ_G0015815.1 mouse_genomes_project 1 2123775 2141021 + Atp6v1h protein_coding retained_intron MGP_129S1SvImJ_T0101576.1 MGP_129S1SvImJ_G0039641.1 mouse_genomes_project 1 45103775 45115744 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101577.1 MGP_129S1SvImJ_G0039641.1 mouse_genomes_project 1 45104118 45115712 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101578.1 MGP_129S1SvImJ_G0039641.1 mouse_genomes_project 1 45104118 45115712 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101579.1 MGP_129S1SvImJ_G0039641.1 mouse_genomes_project 1 45114905 45115521 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0023661.1 MGP_129S1SvImJ_G0016810.1 mouse_genomes_project 1 179398379 179406404 - MGP_129S1SvImJ_P0023661 protein_coding protein_coding MGP_129S1SvImJ_T0021714.1 MGP_129S1SvImJ_G0016392.1 mouse_genomes_project 1 121323679 121333478 + Tfcp2l1 protein_coding processed_transcript MGP_129S1SvImJ_T0021715.1 MGP_129S1SvImJ_G0016392.1 mouse_genomes_project 1 121323680 121389193 + MGP_129S1SvImJ_P0021715 Tfcp2l1 protein_coding protein_coding MGP_129S1SvImJ_T0021470.1 MGP_129S1SvImJ_G0016342.1 mouse_genomes_project 1 95030986 95104680 - MGP_129S1SvImJ_P0021470 Hdlbp protein_coding protein_coding MGP_129S1SvImJ_T0021471.1 MGP_129S1SvImJ_G0016342.1 mouse_genomes_project 1 95032808 95070707 - MGP_129S1SvImJ_P0021471 Hdlbp protein_coding protein_coding MGP_129S1SvImJ_T0021472.1 MGP_129S1SvImJ_G0016342.1 mouse_genomes_project 1 95033048 95065832 - MGP_129S1SvImJ_P0021472 Hdlbp protein_coding protein_coding MGP_129S1SvImJ_T0021473.1 MGP_129S1SvImJ_G0016342.1 mouse_genomes_project 1 95053626 95070673 - Hdlbp protein_coding retained_intron MGP_129S1SvImJ_T0021474.1 MGP_129S1SvImJ_G0016342.1 mouse_genomes_project 1 95056076 95070703 - MGP_129S1SvImJ_P0021474 Hdlbp protein_coding protein_coding MGP_129S1SvImJ_T0021475.1 MGP_129S1SvImJ_G0016342.1 mouse_genomes_project 1 95056493 95066001 - MGP_129S1SvImJ_P0021475 Hdlbp protein_coding protein_coding MGP_129S1SvImJ_T0021476.1 MGP_129S1SvImJ_G0016342.1 mouse_genomes_project 1 95062159 95070453 - MGP_129S1SvImJ_P0021476 Hdlbp protein_coding protein_coding MGP_129S1SvImJ_T0021477.1 MGP_129S1SvImJ_G0016342.1 mouse_genomes_project 1 95062195 95104694 - MGP_129S1SvImJ_P0021477 Hdlbp protein_coding protein_coding MGP_129S1SvImJ_T0021478.1 MGP_129S1SvImJ_G0016342.1 mouse_genomes_project 1 95065337 95070670 - Hdlbp protein_coding retained_intron MGP_129S1SvImJ_T0021479.1 MGP_129S1SvImJ_G0016342.1 mouse_genomes_project 1 95065727 95104253 - MGP_129S1SvImJ_P0021479 Hdlbp protein_coding protein_coding MGP_129S1SvImJ_T0021480.1 MGP_129S1SvImJ_G0016342.1 mouse_genomes_project 1 95101019 95104256 - Hdlbp protein_coding retained_intron MGP_129S1SvImJ_T0024059.1 MGP_129S1SvImJ_G0016909.1 mouse_genomes_project 1 191478697 191504455 - MGP_129S1SvImJ_P0024059 Marc1 protein_coding protein_coding MGP_129S1SvImJ_T0024060.1 MGP_129S1SvImJ_G0016909.1 mouse_genomes_project 1 191479639 191504271 - MGP_129S1SvImJ_P0024060 Marc1 protein_coding protein_coding MGP_129S1SvImJ_T0023646.1 MGP_129S1SvImJ_G0016807.1 mouse_genomes_project 1 179262397 179264264 - Ackr1 protein_coding processed_transcript MGP_129S1SvImJ_T0023647.1 MGP_129S1SvImJ_G0016807.1 mouse_genomes_project 1 179262401 179264016 - MGP_129S1SvImJ_P0023647 Ackr1 protein_coding protein_coding MGP_129S1SvImJ_T0023648.1 MGP_129S1SvImJ_G0016807.1 mouse_genomes_project 1 179262403 179264187 - MGP_129S1SvImJ_P0023648 Ackr1 protein_coding protein_coding MGP_129S1SvImJ_T0000809.1 MGP_129S1SvImJ_G0000744.1 mouse_genomes_project 1 193882221 193884515 - TEC TEC MGP_129S1SvImJ_T0022396.1 MGP_129S1SvImJ_G0016541.1 mouse_genomes_project 1 140245634 140248154 + Ddx59 protein_coding retained_intron MGP_129S1SvImJ_T0022397.1 MGP_129S1SvImJ_G0016541.1 mouse_genomes_project 1 140245634 140271606 + MGP_129S1SvImJ_P0022397 Ddx59 protein_coding protein_coding MGP_129S1SvImJ_T0022398.1 MGP_129S1SvImJ_G0016541.1 mouse_genomes_project 1 140245764 140271613 + MGP_129S1SvImJ_P0022398 Ddx59 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0022399.1 MGP_129S1SvImJ_G0016541.1 mouse_genomes_project 1 140260681 140262956 + Ddx59 protein_coding processed_transcript MGP_129S1SvImJ_T0022400.1 MGP_129S1SvImJ_G0016541.1 mouse_genomes_project 1 140262932 140265311 + Ddx59 protein_coding retained_intron MGP_129S1SvImJ_T0020940.1 MGP_129S1SvImJ_G0016224.1 mouse_genomes_project 1 84128297 84150678 + Daw1 protein_coding retained_intron MGP_129S1SvImJ_T0020941.1 MGP_129S1SvImJ_G0016224.1 mouse_genomes_project 1 84128307 84183392 + MGP_129S1SvImJ_P0020941 Daw1 protein_coding protein_coding MGP_129S1SvImJ_T0020942.1 MGP_129S1SvImJ_G0016224.1 mouse_genomes_project 1 84128307 84183398 + MGP_129S1SvImJ_P0020942 Daw1 protein_coding protein_coding MGP_129S1SvImJ_T0020943.1 MGP_129S1SvImJ_G0016224.1 mouse_genomes_project 1 84128314 84183394 + MGP_129S1SvImJ_P0020943 Daw1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020944.1 MGP_129S1SvImJ_G0016224.1 mouse_genomes_project 1 84128326 84183398 + MGP_129S1SvImJ_P0020944 Daw1 protein_coding protein_coding MGP_129S1SvImJ_T0102085.1 MGP_129S1SvImJ_G0039920.1 mouse_genomes_project 1 144074447 144128654 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002923.1 MGP_129S1SvImJ_G0002755.1 mouse_genomes_project 1 142548882 142582420 + Gm28501 antisense antisense MGP_129S1SvImJ_T0020663.1 MGP_129S1SvImJ_G0016177.1 mouse_genomes_project 1 75761472 75762345 - Glb1l protein_coding processed_transcript MGP_129S1SvImJ_T0020664.1 MGP_129S1SvImJ_G0016177.1 mouse_genomes_project 1 75761479 75774908 - MGP_129S1SvImJ_P0020664 Glb1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020665.1 MGP_129S1SvImJ_G0016177.1 mouse_genomes_project 1 75762327 75765324 - Glb1l protein_coding retained_intron MGP_129S1SvImJ_T0020666.1 MGP_129S1SvImJ_G0016177.1 mouse_genomes_project 1 75762583 75774908 - MGP_129S1SvImJ_P0020666 Glb1l protein_coding protein_coding MGP_129S1SvImJ_T0020667.1 MGP_129S1SvImJ_G0016177.1 mouse_genomes_project 1 75762727 75773553 - MGP_129S1SvImJ_P0020667 Glb1l protein_coding protein_coding MGP_129S1SvImJ_T0020668.1 MGP_129S1SvImJ_G0016177.1 mouse_genomes_project 1 75762727 75767042 - MGP_129S1SvImJ_P0020668 Glb1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020669.1 MGP_129S1SvImJ_G0016177.1 mouse_genomes_project 1 75763065 75773624 - Glb1l protein_coding retained_intron MGP_129S1SvImJ_T0020670.1 MGP_129S1SvImJ_G0016177.1 mouse_genomes_project 1 75763329 75765400 - Glb1l protein_coding retained_intron MGP_129S1SvImJ_T0020671.1 MGP_129S1SvImJ_G0016177.1 mouse_genomes_project 1 75765103 75766447 - Glb1l protein_coding retained_intron MGP_129S1SvImJ_T0020672.1 MGP_129S1SvImJ_G0016177.1 mouse_genomes_project 1 75765357 75765975 - Glb1l protein_coding retained_intron MGP_129S1SvImJ_T0020673.1 MGP_129S1SvImJ_G0016177.1 mouse_genomes_project 1 75766870 75774943 - MGP_129S1SvImJ_P0020673 Glb1l protein_coding protein_coding MGP_129S1SvImJ_T0020674.1 MGP_129S1SvImJ_G0016177.1 mouse_genomes_project 1 75772148 75774883 - Glb1l protein_coding retained_intron MGP_129S1SvImJ_T0020182.1 MGP_129S1SvImJ_G0016083.1 mouse_genomes_project 1 62822119 62859790 + Nrp2 protein_coding retained_intron MGP_129S1SvImJ_T0020183.1 MGP_129S1SvImJ_G0016083.1 mouse_genomes_project 1 62822119 62945321 + MGP_129S1SvImJ_P0020183 Nrp2 protein_coding protein_coding MGP_129S1SvImJ_T0020184.1 MGP_129S1SvImJ_G0016083.1 mouse_genomes_project 1 62822119 62945321 + MGP_129S1SvImJ_P0020184 Nrp2 protein_coding protein_coding MGP_129S1SvImJ_T0020185.1 MGP_129S1SvImJ_G0016083.1 mouse_genomes_project 1 62822536 62919271 + MGP_129S1SvImJ_P0020185 Nrp2 protein_coding protein_coding MGP_129S1SvImJ_T0020186.1 MGP_129S1SvImJ_G0016083.1 mouse_genomes_project 1 62822536 62945321 + MGP_129S1SvImJ_P0020186 Nrp2 protein_coding protein_coding MGP_129S1SvImJ_T0020187.1 MGP_129S1SvImJ_G0016083.1 mouse_genomes_project 1 62822536 62921574 + MGP_129S1SvImJ_P0020187 Nrp2 protein_coding protein_coding MGP_129S1SvImJ_T0020188.1 MGP_129S1SvImJ_G0016083.1 mouse_genomes_project 1 62822536 62945321 + MGP_129S1SvImJ_P0020188 Nrp2 protein_coding protein_coding MGP_129S1SvImJ_T0019594.1 MGP_129S1SvImJ_G0015977.1 mouse_genomes_project 1 42009291 42065702 - MGP_129S1SvImJ_P0019594 Tgfbrap1 protein_coding protein_coding MGP_129S1SvImJ_T0019595.1 MGP_129S1SvImJ_G0015977.1 mouse_genomes_project 1 42009311 42059763 - MGP_129S1SvImJ_P0019595 Tgfbrap1 protein_coding protein_coding MGP_129S1SvImJ_T0019596.1 MGP_129S1SvImJ_G0015977.1 mouse_genomes_project 1 42016778 42023005 - Tgfbrap1 protein_coding retained_intron MGP_129S1SvImJ_T0019597.1 MGP_129S1SvImJ_G0015977.1 mouse_genomes_project 1 42021962 42059481 - MGP_129S1SvImJ_P0019597 Tgfbrap1 protein_coding protein_coding MGP_129S1SvImJ_T0019598.1 MGP_129S1SvImJ_G0015977.1 mouse_genomes_project 1 42036928 42065688 - MGP_129S1SvImJ_P0019598 Tgfbrap1 protein_coding protein_coding MGP_129S1SvImJ_T0019599.1 MGP_129S1SvImJ_G0015977.1 mouse_genomes_project 1 42039696 42059497 - Tgfbrap1 protein_coding retained_intron MGP_129S1SvImJ_T0019600.1 MGP_129S1SvImJ_G0015977.1 mouse_genomes_project 1 42039937 42065717 - Tgfbrap1 protein_coding retained_intron MGP_129S1SvImJ_T0019601.1 MGP_129S1SvImJ_G0015977.1 mouse_genomes_project 1 42041069 42065444 - MGP_129S1SvImJ_P0019601 Tgfbrap1 protein_coding protein_coding MGP_129S1SvImJ_T0000639.1 MGP_129S1SvImJ_G0000578.1 mouse_genomes_project 1 131358587 131361083 + TEC TEC MGP_129S1SvImJ_T0100385.1 MGP_129S1SvImJ_G0038452.1 mouse_genomes_project 1 166286492 166286572 + Gm26224 snoRNA snoRNA MGP_129S1SvImJ_T0023498.1 MGP_129S1SvImJ_G0016763.1 mouse_genomes_project 1 177240948 177272811 + MGP_129S1SvImJ_P0023498 F11r protein_coding protein_coding MGP_129S1SvImJ_T0023499.1 MGP_129S1SvImJ_G0016763.1 mouse_genomes_project 1 177240992 177267205 + F11r protein_coding retained_intron MGP_129S1SvImJ_T0023500.1 MGP_129S1SvImJ_G0016763.1 mouse_genomes_project 1 177271069 177271864 + F11r protein_coding retained_intron MGP_129S1SvImJ_T0022063.1 MGP_129S1SvImJ_G0016471.1 mouse_genomes_project 1 135834720 135870868 - MGP_129S1SvImJ_P0022063 Tmcc2 protein_coding protein_coding MGP_129S1SvImJ_T0022064.1 MGP_129S1SvImJ_G0016471.1 mouse_genomes_project 1 135834721 135847691 - Tmcc2 protein_coding retained_intron MGP_129S1SvImJ_T0022065.1 MGP_129S1SvImJ_G0016471.1 mouse_genomes_project 1 135834721 135847692 - MGP_129S1SvImJ_P0022065 Tmcc2 protein_coding protein_coding MGP_129S1SvImJ_T0022066.1 MGP_129S1SvImJ_G0016471.1 mouse_genomes_project 1 135839006 135846877 - Tmcc2 protein_coding processed_transcript MGP_129S1SvImJ_T0022067.1 MGP_129S1SvImJ_G0016471.1 mouse_genomes_project 1 135839433 135843355 - Tmcc2 protein_coding processed_transcript MGP_129S1SvImJ_T0012324.1 MGP_129S1SvImJ_G0010413.1 mouse_genomes_project 1 166568883 166570080 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012060.1 MGP_129S1SvImJ_G0010149.1 mouse_genomes_project 1 57382399 57385153 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023920.1 MGP_129S1SvImJ_G0016878.1 mouse_genomes_project 1 187414946 187420197 + MGP_129S1SvImJ_P0023920 Lefty1 protein_coding protein_coding MGP_129S1SvImJ_T0019241.1 MGP_129S1SvImJ_G0015907.1 mouse_genomes_project 1 32821393 32824488 - MGP_129S1SvImJ_P0019241 Ccdc115 protein_coding protein_coding MGP_129S1SvImJ_T0019242.1 MGP_129S1SvImJ_G0015907.1 mouse_genomes_project 1 32821401 32823526 - Ccdc115 protein_coding retained_intron MGP_129S1SvImJ_T0012340.1 MGP_129S1SvImJ_G0010429.1 mouse_genomes_project 1 172294581 172297486 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023596.1 MGP_129S1SvImJ_G0016788.1 mouse_genomes_project 1 178344600 178347816 + MGP_129S1SvImJ_P0023596 Slamf9 protein_coding protein_coding MGP_129S1SvImJ_T0012216.1 MGP_129S1SvImJ_G0010305.1 mouse_genomes_project 1 119226090 119226490 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019519.1 MGP_129S1SvImJ_G0015959.1 mouse_genomes_project 1 38297911 38323905 - MGP_129S1SvImJ_P0019519 Rnf149 protein_coding protein_coding MGP_129S1SvImJ_T0019520.1 MGP_129S1SvImJ_G0015959.1 mouse_genomes_project 1 38299079 38323856 - MGP_129S1SvImJ_P0019520 Rnf149 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019521.1 MGP_129S1SvImJ_G0015959.1 mouse_genomes_project 1 38302203 38305353 - Rnf149 protein_coding retained_intron MGP_129S1SvImJ_T0019522.1 MGP_129S1SvImJ_G0015959.1 mouse_genomes_project 1 38311688 38323803 - MGP_129S1SvImJ_P0019522 Rnf149 protein_coding protein_coding MGP_129S1SvImJ_T0101836.1 MGP_129S1SvImJ_G0039788.1 mouse_genomes_project 1 179401140 179406344 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0006039.1 MGP_129S1SvImJ_G0005060.1 mouse_genomes_project 1 190174969 190175503 + Gm33973 lincRNA lincRNA MGP_129S1SvImJ_T0021648.1 MGP_129S1SvImJ_G0016382.1 mouse_genomes_project 1 109760357 109776997 + MGP_129S1SvImJ_P0021648 Serpinb2 protein_coding protein_coding MGP_129S1SvImJ_T0021649.1 MGP_129S1SvImJ_G0016382.1 mouse_genomes_project 1 109760431 109776991 + MGP_129S1SvImJ_P0021649 Serpinb2 protein_coding protein_coding MGP_129S1SvImJ_T0021650.1 MGP_129S1SvImJ_G0016382.1 mouse_genomes_project 1 109773648 109787431 + MGP_129S1SvImJ_P0021650 Serpinb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021651.1 MGP_129S1SvImJ_G0016382.1 mouse_genomes_project 1 109775363 109783996 + MGP_129S1SvImJ_P0021651 Serpinb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022556.1 MGP_129S1SvImJ_G0016576.1 mouse_genomes_project 1 155040705 155097642 + MGP_129S1SvImJ_P0022556 Tpr protein_coding protein_coding MGP_129S1SvImJ_T0022557.1 MGP_129S1SvImJ_G0016576.1 mouse_genomes_project 1 155041117 155097762 + MGP_129S1SvImJ_P0022557 Tpr protein_coding protein_coding MGP_129S1SvImJ_T0022558.1 MGP_129S1SvImJ_G0016576.1 mouse_genomes_project 1 155041251 155043363 + Tpr protein_coding retained_intron MGP_129S1SvImJ_T0022559.1 MGP_129S1SvImJ_G0016576.1 mouse_genomes_project 1 155059846 155061814 + Tpr protein_coding retained_intron MGP_129S1SvImJ_T0022560.1 MGP_129S1SvImJ_G0016576.1 mouse_genomes_project 1 155062638 155064254 + Tpr protein_coding retained_intron MGP_129S1SvImJ_T0022561.1 MGP_129S1SvImJ_G0016576.1 mouse_genomes_project 1 155072591 155076206 + Tpr protein_coding retained_intron MGP_129S1SvImJ_T0022562.1 MGP_129S1SvImJ_G0016576.1 mouse_genomes_project 1 155077216 155088142 + MGP_129S1SvImJ_P0022562 Tpr protein_coding protein_coding MGP_129S1SvImJ_T0022563.1 MGP_129S1SvImJ_G0016576.1 mouse_genomes_project 1 155078275 155088139 + Tpr protein_coding retained_intron MGP_129S1SvImJ_T0022564.1 MGP_129S1SvImJ_G0016576.1 mouse_genomes_project 1 155085287 155091049 + Tpr protein_coding retained_intron MGP_129S1SvImJ_T0022565.1 MGP_129S1SvImJ_G0016576.1 mouse_genomes_project 1 155086758 155097754 + Tpr protein_coding retained_intron MGP_129S1SvImJ_T0022566.1 MGP_129S1SvImJ_G0016576.1 mouse_genomes_project 1 155088023 155097754 + Tpr protein_coding retained_intron MGP_129S1SvImJ_T0022567.1 MGP_129S1SvImJ_G0016576.1 mouse_genomes_project 1 155093744 155097754 + MGP_129S1SvImJ_P0022567 Tpr protein_coding protein_coding MGP_129S1SvImJ_T0022568.1 MGP_129S1SvImJ_G0016576.1 mouse_genomes_project 1 155095281 155097756 + Tpr protein_coding retained_intron MGP_129S1SvImJ_T0022569.1 MGP_129S1SvImJ_G0016576.1 mouse_genomes_project 1 155096697 155097618 + Tpr protein_coding processed_transcript MGP_129S1SvImJ_T0002837.1 MGP_129S1SvImJ_G0002691.1 mouse_genomes_project 1 61858999 61944343 - Pard3bos1 antisense antisense MGP_129S1SvImJ_T0002838.1 MGP_129S1SvImJ_G0002691.1 mouse_genomes_project 1 61878911 61944421 - Pard3bos1 antisense antisense MGP_129S1SvImJ_T0020472.1 MGP_129S1SvImJ_G0016141.1 mouse_genomes_project 1 74737829 74744647 + MGP_129S1SvImJ_P0020472 Cxcr2 protein_coding protein_coding MGP_129S1SvImJ_T0012212.1 MGP_129S1SvImJ_G0010301.1 mouse_genomes_project 1 115381283 115382673 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022440.1 MGP_129S1SvImJ_G0016549.1 mouse_genomes_project 1 142897556 142902426 - MGP_129S1SvImJ_P0022440 2310009B15Rik protein_coding protein_coding MGP_129S1SvImJ_T0022441.1 MGP_129S1SvImJ_G0016549.1 mouse_genomes_project 1 142897557 142899924 - 2310009B15Rik protein_coding retained_intron MGP_129S1SvImJ_T0022442.1 MGP_129S1SvImJ_G0016549.1 mouse_genomes_project 1 142897606 142902421 - MGP_129S1SvImJ_P0022442 2310009B15Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0011953.1 MGP_129S1SvImJ_G0010042.1 mouse_genomes_project 1 24385264 24385915 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000743.1 MGP_129S1SvImJ_G0000680.1 mouse_genomes_project 1 166150758 166151679 + TEC TEC MGP_129S1SvImJ_T0011968.1 MGP_129S1SvImJ_G0010057.1 mouse_genomes_project 1 31368011 31370158 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100352.1 MGP_129S1SvImJ_G0038419.1 mouse_genomes_project 1 87610345 87610415 - Snord82 snoRNA snoRNA MGP_129S1SvImJ_T0023230.1 MGP_129S1SvImJ_G0016700.1 mouse_genomes_project 1 171617121 171649871 - MGP_129S1SvImJ_P0023230 Dusp27 protein_coding protein_coding MGP_129S1SvImJ_T0023231.1 MGP_129S1SvImJ_G0016700.1 mouse_genomes_project 1 171617126 171649845 - MGP_129S1SvImJ_P0023231 Dusp27 protein_coding protein_coding MGP_129S1SvImJ_T0005682.1 MGP_129S1SvImJ_G0004783.1 mouse_genomes_project 1 19701924 19704605 + Gm26580 lincRNA lincRNA MGP_129S1SvImJ_T0019491.1 MGP_129S1SvImJ_G0015952.1 mouse_genomes_project 1 37557131 37598419 - MGP_129S1SvImJ_P0019491 Chst10 protein_coding protein_coding MGP_129S1SvImJ_T0019492.1 MGP_129S1SvImJ_G0015952.1 mouse_genomes_project 1 37557131 37598340 - MGP_129S1SvImJ_P0019492 Chst10 protein_coding protein_coding MGP_129S1SvImJ_T0019493.1 MGP_129S1SvImJ_G0015952.1 mouse_genomes_project 1 37557139 37566611 - MGP_129S1SvImJ_P0019493 Chst10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019494.1 MGP_129S1SvImJ_G0015952.1 mouse_genomes_project 1 37557141 37598491 - MGP_129S1SvImJ_P0019494 Chst10 protein_coding protein_coding MGP_129S1SvImJ_T0019495.1 MGP_129S1SvImJ_G0015952.1 mouse_genomes_project 1 37564993 37598483 - MGP_129S1SvImJ_P0019495 Chst10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019496.1 MGP_129S1SvImJ_G0015952.1 mouse_genomes_project 1 37568797 37598464 - MGP_129S1SvImJ_P0019496 Chst10 protein_coding protein_coding MGP_129S1SvImJ_T0019497.1 MGP_129S1SvImJ_G0015952.1 mouse_genomes_project 1 37590963 37598316 - Chst10 protein_coding retained_intron MGP_129S1SvImJ_T0019498.1 MGP_129S1SvImJ_G0015952.1 mouse_genomes_project 1 37590964 37598340 - Chst10 protein_coding retained_intron MGP_129S1SvImJ_T0012050.1 MGP_129S1SvImJ_G0010139.1 mouse_genomes_project 1 54247312 54247891 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019037.1 MGP_129S1SvImJ_G0015860.1 mouse_genomes_project 1 14474229 14519683 - MGP_129S1SvImJ_P0019037 Jph1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019038.1 MGP_129S1SvImJ_G0015860.1 mouse_genomes_project 1 14507598 14610909 - MGP_129S1SvImJ_P0019038 Jph1 protein_coding protein_coding MGP_129S1SvImJ_T0000711.1 MGP_129S1SvImJ_G0000648.1 mouse_genomes_project 1 158558726 158560642 + TEC TEC MGP_129S1SvImJ_T0100387.1 MGP_129S1SvImJ_G0038454.1 mouse_genomes_project 1 166287154 166287237 + Gm22357 snoRNA snoRNA MGP_129S1SvImJ_T0100321.1 MGP_129S1SvImJ_G0038388.1 mouse_genomes_project 1 24488734 24488840 + Gm24064 snoRNA snoRNA MGP_129S1SvImJ_T0012067.1 MGP_129S1SvImJ_G0010156.1 mouse_genomes_project 1 59652754 59653139 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019577.1 MGP_129S1SvImJ_G0015972.1 mouse_genomes_project 1 39586578 39607520 - MGP_129S1SvImJ_P0019577 Mfsd9 protein_coding protein_coding MGP_129S1SvImJ_T0019578.1 MGP_129S1SvImJ_G0015972.1 mouse_genomes_project 1 39586581 39607544 - MGP_129S1SvImJ_P0019578 Mfsd9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019579.1 MGP_129S1SvImJ_G0015972.1 mouse_genomes_project 1 39597792 39607514 - Mfsd9 protein_coding retained_intron MGP_129S1SvImJ_T0012252.1 MGP_129S1SvImJ_G0010341.1 mouse_genomes_project 1 133107506 133109175 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005941.1 MGP_129S1SvImJ_G0004983.1 mouse_genomes_project 1 141915730 141919356 - Gm26979 lincRNA lincRNA MGP_129S1SvImJ_T0102067.1 MGP_129S1SvImJ_G0039902.1 mouse_genomes_project 1 94159836 94160019 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102071.1 MGP_129S1SvImJ_G0039906.1 mouse_genomes_project 1 104093101 104094094 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0021901.1 MGP_129S1SvImJ_G0016431.1 mouse_genomes_project 1 131858780 131862851 - MGP_129S1SvImJ_P0021901 Cxcr4 protein_coding protein_coding MGP_129S1SvImJ_T0021902.1 MGP_129S1SvImJ_G0016431.1 mouse_genomes_project 1 131859672 131862854 - MGP_129S1SvImJ_P0021902 Cxcr4 protein_coding protein_coding MGP_129S1SvImJ_T0098418.1 MGP_129S1SvImJ_G0036503.1 mouse_genomes_project 1 86878604 86878708 + n-R5s215 rRNA rRNA MGP_129S1SvImJ_T0000610.1 MGP_129S1SvImJ_G0000549.1 mouse_genomes_project 1 110674728 110676976 + TEC TEC MGP_129S1SvImJ_T0012306.1 MGP_129S1SvImJ_G0010395.1 mouse_genomes_project 1 158121679 158122588 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022922.1 MGP_129S1SvImJ_G0016640.1 mouse_genomes_project 1 165258362 165341678 - MGP_129S1SvImJ_P0022922 Tnn protein_coding protein_coding MGP_129S1SvImJ_T0022923.1 MGP_129S1SvImJ_G0016640.1 mouse_genomes_project 1 165259305 165335986 - MGP_129S1SvImJ_P0022923 Tnn protein_coding protein_coding MGP_129S1SvImJ_T0012059.1 MGP_129S1SvImJ_G0010148.1 mouse_genomes_project 1 57339531 57340411 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000601.1 MGP_129S1SvImJ_G0000540.1 mouse_genomes_project 1 101685674 101688378 + TEC TEC MGP_129S1SvImJ_T0018778.1 MGP_129S1SvImJ_G0015816.1 mouse_genomes_project 1 2761803 2764649 + Oprk1 protein_coding retained_intron MGP_129S1SvImJ_T0018779.1 MGP_129S1SvImJ_G0015816.1 mouse_genomes_project 1 2761830 2779436 + MGP_129S1SvImJ_P0018779 Oprk1 protein_coding protein_coding MGP_129S1SvImJ_T0018780.1 MGP_129S1SvImJ_G0015816.1 mouse_genomes_project 1 2761894 2776171 + MGP_129S1SvImJ_P0018780 Oprk1 protein_coding protein_coding MGP_129S1SvImJ_T0018781.1 MGP_129S1SvImJ_G0015816.1 mouse_genomes_project 1 2762278 2777319 + MGP_129S1SvImJ_P0018781 Oprk1 protein_coding protein_coding MGP_129S1SvImJ_T0018782.1 MGP_129S1SvImJ_G0015816.1 mouse_genomes_project 1 2769822 2776458 + Oprk1 protein_coding retained_intron MGP_129S1SvImJ_T0020340.1 MGP_129S1SvImJ_G0016114.1 mouse_genomes_project 1 66962777 66977514 + MGP_129S1SvImJ_P0020340 Rpe protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020341.1 MGP_129S1SvImJ_G0016114.1 mouse_genomes_project 1 66962777 66981785 + MGP_129S1SvImJ_P0020341 Rpe protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020342.1 MGP_129S1SvImJ_G0016114.1 mouse_genomes_project 1 66962777 66981785 + MGP_129S1SvImJ_P0020342 Rpe protein_coding protein_coding MGP_129S1SvImJ_T0020343.1 MGP_129S1SvImJ_G0016114.1 mouse_genomes_project 1 66962777 66981785 + MGP_129S1SvImJ_P0020343 Rpe protein_coding protein_coding MGP_129S1SvImJ_T0020344.1 MGP_129S1SvImJ_G0016114.1 mouse_genomes_project 1 66962853 66980108 + MGP_129S1SvImJ_P0020344 Rpe protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0012145.1 MGP_129S1SvImJ_G0010234.1 mouse_genomes_project 1 88876324 88876447 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012009.1 MGP_129S1SvImJ_G0010098.1 mouse_genomes_project 1 43506830 43507139 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000763.1 MGP_129S1SvImJ_G0000700.1 mouse_genomes_project 1 177150202 177151459 + TEC TEC MGP_129S1SvImJ_T0012364.1 MGP_129S1SvImJ_G0010453.1 mouse_genomes_project 1 185905791 185906310 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002903.1 MGP_129S1SvImJ_G0002739.1 mouse_genomes_project 1 134682756 134683803 + Gm28914 antisense antisense MGP_129S1SvImJ_T0012052.1 MGP_129S1SvImJ_G0010141.1 mouse_genomes_project 1 54839485 54840240 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020608.1 MGP_129S1SvImJ_G0016168.1 mouse_genomes_project 1 75563285 75569647 - MGP_129S1SvImJ_P0020608 Ihh protein_coding protein_coding MGP_129S1SvImJ_T0020609.1 MGP_129S1SvImJ_G0016168.1 mouse_genomes_project 1 75565698 75569417 - Ihh protein_coding retained_intron MGP_129S1SvImJ_T0012332.1 MGP_129S1SvImJ_G0010421.1 mouse_genomes_project 1 169940556 169940872 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009537.1 MGP_129S1SvImJ_G0007653.1 mouse_genomes_project 1 108715246 108715382 - Mir3473f miRNA miRNA MGP_129S1SvImJ_T0022172.1 MGP_129S1SvImJ_G0016493.1 mouse_genomes_project 1 137309204 137421295 - MGP_129S1SvImJ_P0022172 Atp2b4 protein_coding protein_coding MGP_129S1SvImJ_T0022173.1 MGP_129S1SvImJ_G0016493.1 mouse_genomes_project 1 137311386 137311591 - MGP_129S1SvImJ_P0022173 Atp2b4 protein_coding protein_coding MGP_129S1SvImJ_T0022174.1 MGP_129S1SvImJ_G0016493.1 mouse_genomes_project 1 137313639 137372213 - MGP_129S1SvImJ_P0022174 Atp2b4 protein_coding protein_coding MGP_129S1SvImJ_T0022175.1 MGP_129S1SvImJ_G0016493.1 mouse_genomes_project 1 137313639 137372213 - MGP_129S1SvImJ_P0022175 Atp2b4 protein_coding protein_coding MGP_129S1SvImJ_T0022176.1 MGP_129S1SvImJ_G0016493.1 mouse_genomes_project 1 137317276 137372147 - MGP_129S1SvImJ_P0022176 Atp2b4 protein_coding protein_coding MGP_129S1SvImJ_T0022177.1 MGP_129S1SvImJ_G0016493.1 mouse_genomes_project 1 137327627 137371747 - MGP_129S1SvImJ_P0022177 Atp2b4 protein_coding protein_coding MGP_129S1SvImJ_T0022178.1 MGP_129S1SvImJ_G0016493.1 mouse_genomes_project 1 137329969 137331576 - Atp2b4 protein_coding retained_intron MGP_129S1SvImJ_T0022179.1 MGP_129S1SvImJ_G0016493.1 mouse_genomes_project 1 137372165 137421290 - Atp2b4 protein_coding processed_transcript MGP_129S1SvImJ_T0002997.1 MGP_129S1SvImJ_G0002815.1 mouse_genomes_project 1 193929314 193932029 + 1700007P06Rik antisense antisense MGP_129S1SvImJ_T0023886.1 MGP_129S1SvImJ_G0016869.1 mouse_genomes_project 1 186862061 186917680 - MGP_129S1SvImJ_P0023886 Stum protein_coding protein_coding MGP_129S1SvImJ_T0023887.1 MGP_129S1SvImJ_G0016869.1 mouse_genomes_project 1 186870777 186917717 - MGP_129S1SvImJ_P0023887 Stum protein_coding protein_coding MGP_129S1SvImJ_T0005827.1 MGP_129S1SvImJ_G0004888.1 mouse_genomes_project 1 81199289 81202723 + Gm29125 lincRNA lincRNA MGP_129S1SvImJ_T0005845.1 MGP_129S1SvImJ_G0004903.1 mouse_genomes_project 1 90463419 90469563 + 1700067G17Rik lincRNA lincRNA MGP_129S1SvImJ_T0017008.1 MGP_129S1SvImJ_G0015091.1 mouse_genomes_project 1 32857002 32860524 - Gm28417 processed_transcript retained_intron MGP_129S1SvImJ_T0017009.1 MGP_129S1SvImJ_G0015091.1 mouse_genomes_project 1 32860244 32863709 - Gm28417 processed_transcript antisense MGP_129S1SvImJ_T0017010.1 MGP_129S1SvImJ_G0015091.1 mouse_genomes_project 1 32862069 32863673 - Gm28417 processed_transcript antisense MGP_129S1SvImJ_T0021912.1 MGP_129S1SvImJ_G0016433.1 mouse_genomes_project 1 133714230 133796707 - MGP_129S1SvImJ_P0021912 Cd55b protein_coding protein_coding MGP_129S1SvImJ_T0021913.1 MGP_129S1SvImJ_G0016433.1 mouse_genomes_project 1 133759832 133796438 - Cd55b protein_coding processed_transcript MGP_129S1SvImJ_T0020769.1 MGP_129S1SvImJ_G0016188.1 mouse_genomes_project 1 76023126 76052099 + MGP_129S1SvImJ_P0020769 Asic4 protein_coding protein_coding MGP_129S1SvImJ_T0020770.1 MGP_129S1SvImJ_G0016188.1 mouse_genomes_project 1 76023389 76052102 + MGP_129S1SvImJ_P0020770 Asic4 protein_coding protein_coding MGP_129S1SvImJ_T0023639.1 MGP_129S1SvImJ_G0016801.1 mouse_genomes_project 1 179116857 179117799 + MGP_129S1SvImJ_P0023639 Olfr218 protein_coding protein_coding MGP_129S1SvImJ_T0012070.1 MGP_129S1SvImJ_G0010159.1 mouse_genomes_project 1 60608552 60609259 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000825.1 MGP_129S1SvImJ_G0000759.1 mouse_genomes_project 1 200464229 200464857 + TEC TEC MGP_129S1SvImJ_T0012311.1 MGP_129S1SvImJ_G0010400.1 mouse_genomes_project 1 160086936 160087518 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011963.1 MGP_129S1SvImJ_G0010052.1 mouse_genomes_project 1 29395094 29395320 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022156.1 MGP_129S1SvImJ_G0016490.1 mouse_genomes_project 1 137214769 137261644 - MGP_129S1SvImJ_P0022156 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022157.1 MGP_129S1SvImJ_G0016490.1 mouse_genomes_project 1 137214769 137260284 - MGP_129S1SvImJ_P0022157 protein_coding protein_coding MGP_129S1SvImJ_T0023672.1 MGP_129S1SvImJ_G0016819.1 mouse_genomes_project 1 180010770 180068718 - MGP_129S1SvImJ_P0023672 protein_coding protein_coding MGP_129S1SvImJ_T0023673.1 MGP_129S1SvImJ_G0016819.1 mouse_genomes_project 1 180058960 180068773 - protein_coding retained_intron MGP_129S1SvImJ_T0021228.1 MGP_129S1SvImJ_G0016288.1 mouse_genomes_project 1 90108087 90137981 - MGP_129S1SvImJ_P0021228 Arl4c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021229.1 MGP_129S1SvImJ_G0016288.1 mouse_genomes_project 1 90108089 90137981 - MGP_129S1SvImJ_P0021229 Arl4c protein_coding protein_coding MGP_129S1SvImJ_T0021230.1 MGP_129S1SvImJ_G0016288.1 mouse_genomes_project 1 90134315 90138326 - MGP_129S1SvImJ_P0021230 Arl4c protein_coding protein_coding MGP_129S1SvImJ_T0020013.1 MGP_129S1SvImJ_G0016055.1 mouse_genomes_project 1 58472712 58481951 + MGP_129S1SvImJ_P0020013 Ndufb3 protein_coding protein_coding MGP_129S1SvImJ_T0011904.1 MGP_129S1SvImJ_G0009993.1 mouse_genomes_project 1 6757513 6759029 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005768.1 MGP_129S1SvImJ_G0004844.1 mouse_genomes_project 1 61356333 61362557 - Gm28083 lincRNA lincRNA MGP_129S1SvImJ_T0005707.1 MGP_129S1SvImJ_G0004805.1 mouse_genomes_project 1 35297680 35303683 - Gm33533 lincRNA lincRNA MGP_129S1SvImJ_T0023150.1 MGP_129S1SvImJ_G0016686.1 mouse_genomes_project 1 170240029 170267650 + MGP_129S1SvImJ_P0023150 Dpt protein_coding protein_coding MGP_129S1SvImJ_T0000802.1 MGP_129S1SvImJ_G0000737.1 mouse_genomes_project 1 189575360 189578184 + TEC TEC MGP_129S1SvImJ_T0020432.1 MGP_129S1SvImJ_G0016133.1 mouse_genomes_project 1 73101578 73149313 + Smarcal1 protein_coding retained_intron MGP_129S1SvImJ_T0020433.1 MGP_129S1SvImJ_G0016133.1 mouse_genomes_project 1 73101578 73122130 + Smarcal1 protein_coding retained_intron MGP_129S1SvImJ_T0020434.1 MGP_129S1SvImJ_G0016133.1 mouse_genomes_project 1 73101578 73119002 + Smarcal1 protein_coding retained_intron MGP_129S1SvImJ_T0020435.1 MGP_129S1SvImJ_G0016133.1 mouse_genomes_project 1 73101578 73155531 + MGP_129S1SvImJ_P0020435 Smarcal1 protein_coding protein_coding MGP_129S1SvImJ_T0020436.1 MGP_129S1SvImJ_G0016133.1 mouse_genomes_project 1 73101578 73104319 + MGP_129S1SvImJ_P0020436 Smarcal1 protein_coding protein_coding MGP_129S1SvImJ_T0020437.1 MGP_129S1SvImJ_G0016133.1 mouse_genomes_project 1 73101578 73118562 + MGP_129S1SvImJ_P0020437 Smarcal1 protein_coding protein_coding MGP_129S1SvImJ_T0020438.1 MGP_129S1SvImJ_G0016133.1 mouse_genomes_project 1 73101942 73155531 + MGP_129S1SvImJ_P0020438 Smarcal1 protein_coding protein_coding MGP_129S1SvImJ_T0020439.1 MGP_129S1SvImJ_G0016133.1 mouse_genomes_project 1 73103965 73149313 + Smarcal1 protein_coding retained_intron MGP_129S1SvImJ_T0020440.1 MGP_129S1SvImJ_G0016133.1 mouse_genomes_project 1 73139254 73150696 + Smarcal1 protein_coding retained_intron MGP_129S1SvImJ_T0023836.1 MGP_129S1SvImJ_G0016864.1 mouse_genomes_project 1 186186994 186188295 + MGP_129S1SvImJ_P0023836 Gm10518 protein_coding protein_coding MGP_129S1SvImJ_T0022640.1 MGP_129S1SvImJ_G0016590.1 mouse_genomes_project 1 157536273 157546830 + MGP_129S1SvImJ_P0022640 Arpc5 protein_coding protein_coding MGP_129S1SvImJ_T0022641.1 MGP_129S1SvImJ_G0016590.1 mouse_genomes_project 1 157538224 157544122 + Arpc5 protein_coding retained_intron MGP_129S1SvImJ_T0020277.1 MGP_129S1SvImJ_G0016102.1 mouse_genomes_project 1 65254000 65255583 - MGP_129S1SvImJ_P0020277 Crygd protein_coding protein_coding MGP_129S1SvImJ_T0020278.1 MGP_129S1SvImJ_G0016102.1 mouse_genomes_project 1 65254473 65255432 - MGP_129S1SvImJ_P0020278 Crygd protein_coding protein_coding MGP_129S1SvImJ_T0020279.1 MGP_129S1SvImJ_G0016102.1 mouse_genomes_project 1 65254861 65255583 - Crygd protein_coding retained_intron MGP_129S1SvImJ_T0021788.1 MGP_129S1SvImJ_G0016410.1 mouse_genomes_project 1 124260419 124343156 + MGP_129S1SvImJ_P0021788 Ccdc93 protein_coding protein_coding MGP_129S1SvImJ_T0021789.1 MGP_129S1SvImJ_G0016410.1 mouse_genomes_project 1 124260445 124282141 + Ccdc93 protein_coding retained_intron MGP_129S1SvImJ_T0021790.1 MGP_129S1SvImJ_G0016410.1 mouse_genomes_project 1 124260465 124282834 + Ccdc93 protein_coding processed_transcript MGP_129S1SvImJ_T0021791.1 MGP_129S1SvImJ_G0016410.1 mouse_genomes_project 1 124260478 124277104 + Ccdc93 protein_coding processed_transcript MGP_129S1SvImJ_T0021792.1 MGP_129S1SvImJ_G0016410.1 mouse_genomes_project 1 124260480 124337277 + MGP_129S1SvImJ_P0021792 Ccdc93 protein_coding protein_coding MGP_129S1SvImJ_T0021793.1 MGP_129S1SvImJ_G0016410.1 mouse_genomes_project 1 124326883 124335169 + Ccdc93 protein_coding retained_intron MGP_129S1SvImJ_T0002862.1 MGP_129S1SvImJ_G0002707.1 mouse_genomes_project 1 79042235 79058357 - Gm28410 antisense antisense MGP_129S1SvImJ_T0019794.1 MGP_129S1SvImJ_G0016012.1 mouse_genomes_project 1 52374902 52378643 + Hibch protein_coding retained_intron MGP_129S1SvImJ_T0019795.1 MGP_129S1SvImJ_G0016012.1 mouse_genomes_project 1 52375017 52416189 + Hibch protein_coding retained_intron MGP_129S1SvImJ_T0019796.1 MGP_129S1SvImJ_G0016012.1 mouse_genomes_project 1 52375083 52448723 + MGP_129S1SvImJ_P0019796 Hibch protein_coding protein_coding MGP_129S1SvImJ_T0019797.1 MGP_129S1SvImJ_G0016012.1 mouse_genomes_project 1 52381717 52389361 + Hibch protein_coding processed_transcript MGP_129S1SvImJ_T0019798.1 MGP_129S1SvImJ_G0016012.1 mouse_genomes_project 1 52395101 52429393 + Hibch protein_coding processed_transcript MGP_129S1SvImJ_T0019799.1 MGP_129S1SvImJ_G0016012.1 mouse_genomes_project 1 52430705 52442249 + Hibch protein_coding retained_intron MGP_129S1SvImJ_T0012225.1 MGP_129S1SvImJ_G0010314.1 mouse_genomes_project 1 121969455 121970257 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098429.1 MGP_129S1SvImJ_G0036514.1 mouse_genomes_project 1 166834917 166835035 - Gm25488 rRNA rRNA MGP_129S1SvImJ_T0012179.1 MGP_129S1SvImJ_G0010268.1 mouse_genomes_project 1 106542073 106542541 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021923.1 MGP_129S1SvImJ_G0016438.1 mouse_genomes_project 1 134081509 134106867 - MGP_129S1SvImJ_P0021923 protein_coding protein_coding MGP_129S1SvImJ_T0021924.1 MGP_129S1SvImJ_G0016438.1 mouse_genomes_project 1 134081516 134084573 - protein_coding retained_intron MGP_129S1SvImJ_T0021925.1 MGP_129S1SvImJ_G0016438.1 mouse_genomes_project 1 134082605 134125107 - MGP_129S1SvImJ_P0021925 protein_coding protein_coding MGP_129S1SvImJ_T0021926.1 MGP_129S1SvImJ_G0016438.1 mouse_genomes_project 1 134083342 134106868 - MGP_129S1SvImJ_P0021926 protein_coding protein_coding MGP_129S1SvImJ_T0021927.1 MGP_129S1SvImJ_G0016438.1 mouse_genomes_project 1 134083342 134106868 - MGP_129S1SvImJ_P0021927 protein_coding protein_coding MGP_129S1SvImJ_T0021928.1 MGP_129S1SvImJ_G0016438.1 mouse_genomes_project 1 134090024 134106867 - MGP_129S1SvImJ_P0021928 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021929.1 MGP_129S1SvImJ_G0016438.1 mouse_genomes_project 1 134090024 134106867 - MGP_129S1SvImJ_P0021929 protein_coding protein_coding MGP_129S1SvImJ_T0021930.1 MGP_129S1SvImJ_G0016438.1 mouse_genomes_project 1 134090024 134106867 - MGP_129S1SvImJ_P0021930 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021931.1 MGP_129S1SvImJ_G0016438.1 mouse_genomes_project 1 134090212 134108119 - MGP_129S1SvImJ_P0021931 protein_coding protein_coding MGP_129S1SvImJ_T0021932.1 MGP_129S1SvImJ_G0016438.1 mouse_genomes_project 1 134099871 134109521 - MGP_129S1SvImJ_P0021932 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0000445.1 MGP_129S1SvImJ_G0000385.1 mouse_genomes_project 1 23672431 23676977 - TEC TEC MGP_129S1SvImJ_T0012365.1 MGP_129S1SvImJ_G0010454.1 mouse_genomes_project 1 187171622 187172099 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000773.1 MGP_129S1SvImJ_G0000710.1 mouse_genomes_project 1 182891682 182893101 - TEC TEC MGP_129S1SvImJ_T0019215.1 MGP_129S1SvImJ_G0015905.1 mouse_genomes_project 1 32226979 32282493 - MGP_129S1SvImJ_P0019215 Bend6 protein_coding protein_coding MGP_129S1SvImJ_T0019216.1 MGP_129S1SvImJ_G0015905.1 mouse_genomes_project 1 32226979 32260509 - MGP_129S1SvImJ_P0019216 Bend6 protein_coding protein_coding MGP_129S1SvImJ_T0019217.1 MGP_129S1SvImJ_G0015905.1 mouse_genomes_project 1 32237556 32258356 - Bend6 protein_coding processed_transcript MGP_129S1SvImJ_T0019218.1 MGP_129S1SvImJ_G0015905.1 mouse_genomes_project 1 32238017 32258894 - Bend6 protein_coding retained_intron MGP_129S1SvImJ_T0019219.1 MGP_129S1SvImJ_G0015905.1 mouse_genomes_project 1 32248616 32258366 - Bend6 protein_coding processed_transcript MGP_129S1SvImJ_T0098785.1 MGP_129S1SvImJ_G0036869.1 mouse_genomes_project 1 93379740 93381211 + Gm29101 sense_intronic sense_intronic MGP_129S1SvImJ_T0000687.1 MGP_129S1SvImJ_G0000624.1 mouse_genomes_project 1 143134381 143138504 - TEC TEC MGP_129S1SvImJ_T0023684.1 MGP_129S1SvImJ_G0016828.1 mouse_genomes_project 1 180309444 180310532 - MGP_129S1SvImJ_P0023684 Olfr419 protein_coding protein_coding MGP_129S1SvImJ_T0019376.1 MGP_129S1SvImJ_G0015933.1 mouse_genomes_project 1 35358445 35510749 - MGP_129S1SvImJ_P0019376 Tmem131 protein_coding protein_coding MGP_129S1SvImJ_T0019377.1 MGP_129S1SvImJ_G0015933.1 mouse_genomes_project 1 35358448 35511044 - MGP_129S1SvImJ_P0019377 Tmem131 protein_coding protein_coding MGP_129S1SvImJ_T0019378.1 MGP_129S1SvImJ_G0015933.1 mouse_genomes_project 1 35367200 35382776 - Tmem131 protein_coding retained_intron MGP_129S1SvImJ_T0019379.1 MGP_129S1SvImJ_G0015933.1 mouse_genomes_project 1 35374405 35376403 - Tmem131 protein_coding retained_intron MGP_129S1SvImJ_T0019380.1 MGP_129S1SvImJ_G0015933.1 mouse_genomes_project 1 35380331 35384951 - MGP_129S1SvImJ_P0019380 Tmem131 protein_coding protein_coding MGP_129S1SvImJ_T0019381.1 MGP_129S1SvImJ_G0015933.1 mouse_genomes_project 1 35382109 35385342 - MGP_129S1SvImJ_P0019381 Tmem131 protein_coding protein_coding MGP_129S1SvImJ_T0019382.1 MGP_129S1SvImJ_G0015933.1 mouse_genomes_project 1 35384849 35391756 - MGP_129S1SvImJ_P0019382 Tmem131 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019383.1 MGP_129S1SvImJ_G0015933.1 mouse_genomes_project 1 35408644 35514888 - MGP_129S1SvImJ_P0019383 Tmem131 protein_coding protein_coding MGP_129S1SvImJ_T0002943.1 MGP_129S1SvImJ_G0002771.1 mouse_genomes_project 1 165102167 165105507 - Gm38039 antisense antisense MGP_129S1SvImJ_T0011889.1 MGP_129S1SvImJ_G0009978.1 mouse_genomes_project 1 4382342 4382730 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012155.1 MGP_129S1SvImJ_G0010244.1 mouse_genomes_project 1 94010782 94011194 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020244.1 MGP_129S1SvImJ_G0016095.1 mouse_genomes_project 1 64703768 64774966 + MGP_129S1SvImJ_P0020244 Creb1 protein_coding protein_coding MGP_129S1SvImJ_T0020245.1 MGP_129S1SvImJ_G0016095.1 mouse_genomes_project 1 64703921 64780129 + MGP_129S1SvImJ_P0020245 Creb1 protein_coding protein_coding MGP_129S1SvImJ_T0020246.1 MGP_129S1SvImJ_G0016095.1 mouse_genomes_project 1 64703927 64738213 + Creb1 protein_coding retained_intron MGP_129S1SvImJ_T0020247.1 MGP_129S1SvImJ_G0016095.1 mouse_genomes_project 1 64703932 64758876 + MGP_129S1SvImJ_P0020247 Creb1 protein_coding protein_coding MGP_129S1SvImJ_T0020248.1 MGP_129S1SvImJ_G0016095.1 mouse_genomes_project 1 64703942 64781818 + MGP_129S1SvImJ_P0020248 Creb1 protein_coding protein_coding MGP_129S1SvImJ_T0020249.1 MGP_129S1SvImJ_G0016095.1 mouse_genomes_project 1 64703955 64755773 + Creb1 protein_coding processed_transcript MGP_129S1SvImJ_T0020250.1 MGP_129S1SvImJ_G0016095.1 mouse_genomes_project 1 64703982 64774738 + MGP_129S1SvImJ_P0020250 Creb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020251.1 MGP_129S1SvImJ_G0016095.1 mouse_genomes_project 1 64739818 64741460 + Creb1 protein_coding retained_intron MGP_129S1SvImJ_T0020252.1 MGP_129S1SvImJ_G0016095.1 mouse_genomes_project 1 64757047 64759809 + Creb1 protein_coding retained_intron MGP_129S1SvImJ_T0000665.1 MGP_129S1SvImJ_G0000603.1 mouse_genomes_project 1 139251587 139252608 - TEC TEC MGP_129S1SvImJ_T0017112.1 MGP_129S1SvImJ_G0015124.1 mouse_genomes_project 1 176614257 176627877 + Gm9929 processed_transcript processed_transcript MGP_129S1SvImJ_T0011890.1 MGP_129S1SvImJ_G0009979.1 mouse_genomes_project 1 4437396 4437574 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002828.1 MGP_129S1SvImJ_G0002685.1 mouse_genomes_project 1 58097313 58168751 - Gm15759 antisense antisense MGP_129S1SvImJ_T0000815.1 MGP_129S1SvImJ_G0000750.1 mouse_genomes_project 1 196549735 196550620 - TEC TEC MGP_129S1SvImJ_T0012224.1 MGP_129S1SvImJ_G0010313.1 mouse_genomes_project 1 121882323 121883303 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021384.1 MGP_129S1SvImJ_G0016322.1 mouse_genomes_project 1 94200092 94201101 + MGP_129S1SvImJ_P0021384 Olfr1410 protein_coding protein_coding MGP_129S1SvImJ_T0021385.1 MGP_129S1SvImJ_G0016322.1 mouse_genomes_project 1 94200092 94201061 + MGP_129S1SvImJ_P0021385 Olfr1410 protein_coding protein_coding MGP_129S1SvImJ_T0005806.1 MGP_129S1SvImJ_G0004873.1 mouse_genomes_project 1 74079092 74082586 - C530043A13Rik lincRNA lincRNA MGP_129S1SvImJ_T0005807.1 MGP_129S1SvImJ_G0004873.1 mouse_genomes_project 1 74079094 74082419 - C530043A13Rik lincRNA lincRNA MGP_129S1SvImJ_T0005808.1 MGP_129S1SvImJ_G0004873.1 mouse_genomes_project 1 74080157 74086749 - C530043A13Rik lincRNA lincRNA MGP_129S1SvImJ_T0000761.1 MGP_129S1SvImJ_G0000698.1 mouse_genomes_project 1 173977410 173979686 - TEC TEC MGP_129S1SvImJ_T0002797.1 MGP_129S1SvImJ_G0002660.1 mouse_genomes_project 1 35059364 35060068 - Gm38033 antisense antisense MGP_129S1SvImJ_T0009569.1 MGP_129S1SvImJ_G0007685.1 mouse_genomes_project 1 183035119 183035199 + Gm25993 miRNA miRNA MGP_129S1SvImJ_T0000797.1 MGP_129S1SvImJ_G0000733.1 mouse_genomes_project 1 188598993 188600664 - TEC TEC MGP_129S1SvImJ_T0005915.1 MGP_129S1SvImJ_G0004961.1 mouse_genomes_project 1 130032796 130037119 - 4930599A14Rik lincRNA lincRNA MGP_129S1SvImJ_T0005916.1 MGP_129S1SvImJ_G0004961.1 mouse_genomes_project 1 130035315 130037145 - 4930599A14Rik lincRNA lincRNA MGP_129S1SvImJ_T0023304.1 MGP_129S1SvImJ_G0016722.1 mouse_genomes_project 1 175615263 175622832 + MGP_129S1SvImJ_P0023304 Ccdc190 protein_coding protein_coding MGP_129S1SvImJ_T0023305.1 MGP_129S1SvImJ_G0016722.1 mouse_genomes_project 1 175616544 175622592 + MGP_129S1SvImJ_P0023305 Ccdc190 protein_coding protein_coding MGP_129S1SvImJ_T0101597.1 MGP_129S1SvImJ_G0039650.1 mouse_genomes_project 1 192225941 192241338 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101598.1 MGP_129S1SvImJ_G0039650.1 mouse_genomes_project 1 192240560 192241197 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0009490.1 MGP_129S1SvImJ_G0007606.1 mouse_genomes_project 1 34647156 34647218 - Mir6897 miRNA miRNA MGP_129S1SvImJ_T0000783.1 MGP_129S1SvImJ_G0000720.1 mouse_genomes_project 1 184546052 184546646 - TEC TEC MGP_129S1SvImJ_T0000784.1 MGP_129S1SvImJ_G0000720.1 mouse_genomes_project 1 184546098 184546644 - TEC pseudogene MGP_129S1SvImJ_T0005674.1 MGP_129S1SvImJ_G0004775.1 mouse_genomes_project 1 14169486 14174328 + D030040B21Rik lincRNA lincRNA MGP_129S1SvImJ_T0002900.1 MGP_129S1SvImJ_G0002738.1 mouse_genomes_project 1 134211510 134225630 - Gm15848 antisense antisense MGP_129S1SvImJ_T0002901.1 MGP_129S1SvImJ_G0002738.1 mouse_genomes_project 1 134211736 134222220 - Gm15848 antisense antisense MGP_129S1SvImJ_T0002902.1 MGP_129S1SvImJ_G0002738.1 mouse_genomes_project 1 134218946 134222250 - Gm15848 antisense antisense MGP_129S1SvImJ_T0000735.1 MGP_129S1SvImJ_G0000672.1 mouse_genomes_project 1 165782916 165787946 - TEC TEC MGP_129S1SvImJ_T0021497.1 MGP_129S1SvImJ_G0016345.1 mouse_genomes_project 1 95256742 95273183 - MGP_129S1SvImJ_P0021497 Stk25 protein_coding protein_coding MGP_129S1SvImJ_T0021498.1 MGP_129S1SvImJ_G0016345.1 mouse_genomes_project 1 95258891 95273090 - Stk25 protein_coding retained_intron MGP_129S1SvImJ_T0021499.1 MGP_129S1SvImJ_G0016345.1 mouse_genomes_project 1 95259343 95262346 - Stk25 protein_coding retained_intron MGP_129S1SvImJ_T0021500.1 MGP_129S1SvImJ_G0016345.1 mouse_genomes_project 1 95260380 95262773 - Stk25 protein_coding retained_intron MGP_129S1SvImJ_T0021501.1 MGP_129S1SvImJ_G0016345.1 mouse_genomes_project 1 95262834 95272940 - MGP_129S1SvImJ_P0021501 Stk25 protein_coding protein_coding MGP_129S1SvImJ_T0021502.1 MGP_129S1SvImJ_G0016345.1 mouse_genomes_project 1 95263923 95273140 - MGP_129S1SvImJ_P0021502 Stk25 protein_coding protein_coding MGP_129S1SvImJ_T0009548.1 MGP_129S1SvImJ_G0007664.1 mouse_genomes_project 1 141968511 141968591 + Mir181b-1 miRNA miRNA MGP_129S1SvImJ_T0100360.1 MGP_129S1SvImJ_G0038427.1 mouse_genomes_project 1 105207092 105207234 - Gm23965 snoRNA snoRNA MGP_129S1SvImJ_T0005691.1 MGP_129S1SvImJ_G0004791.1 mouse_genomes_project 1 29244862 29315301 - lincRNA lincRNA MGP_129S1SvImJ_T0021586.1 MGP_129S1SvImJ_G0016366.1 mouse_genomes_project 1 107622356 107766165 - MGP_129S1SvImJ_P0021586 Pign protein_coding protein_coding MGP_129S1SvImJ_T0021587.1 MGP_129S1SvImJ_G0016366.1 mouse_genomes_project 1 107622360 107771743 - MGP_129S1SvImJ_P0021587 Pign protein_coding protein_coding MGP_129S1SvImJ_T0021588.1 MGP_129S1SvImJ_G0016366.1 mouse_genomes_project 1 107625078 107672486 - Pign protein_coding processed_transcript MGP_129S1SvImJ_T0021589.1 MGP_129S1SvImJ_G0016366.1 mouse_genomes_project 1 107658862 107771724 - MGP_129S1SvImJ_P0021589 Pign protein_coding protein_coding MGP_129S1SvImJ_T0021590.1 MGP_129S1SvImJ_G0016366.1 mouse_genomes_project 1 107663038 107771743 - MGP_129S1SvImJ_P0021590 Pign protein_coding protein_coding MGP_129S1SvImJ_T0021591.1 MGP_129S1SvImJ_G0016366.1 mouse_genomes_project 1 107753783 107771758 - Pign protein_coding retained_intron MGP_129S1SvImJ_T0021592.1 MGP_129S1SvImJ_G0016366.1 mouse_genomes_project 1 107753783 107771757 - Pign protein_coding retained_intron MGP_129S1SvImJ_T0021593.1 MGP_129S1SvImJ_G0016366.1 mouse_genomes_project 1 107753937 107756806 - Pign protein_coding retained_intron MGP_129S1SvImJ_T0021594.1 MGP_129S1SvImJ_G0016366.1 mouse_genomes_project 1 107765415 107771754 - Pign protein_coding retained_intron MGP_129S1SvImJ_T0021595.1 MGP_129S1SvImJ_G0016366.1 mouse_genomes_project 1 107766334 107771753 - Pign protein_coding retained_intron MGP_129S1SvImJ_T0099128.1 MGP_129S1SvImJ_G0037195.1 mouse_genomes_project 1 155735579 155735686 - Gm22756 snRNA snRNA MGP_129S1SvImJ_T0005863.1 MGP_129S1SvImJ_G0004921.1 mouse_genomes_project 1 94731126 94732288 - Gm28086 lincRNA lincRNA MGP_129S1SvImJ_T0000835.1 MGP_129S1SvImJ_G0000769.1 mouse_genomes_project 1 202409979 202412695 - TEC TEC MGP_129S1SvImJ_T0024360.1 MGP_129S1SvImJ_G0016966.1 mouse_genomes_project 1 202110852 202134885 + MGP_129S1SvImJ_P0024360 Cd34 protein_coding protein_coding MGP_129S1SvImJ_T0024361.1 MGP_129S1SvImJ_G0016966.1 mouse_genomes_project 1 202110908 202134885 + MGP_129S1SvImJ_P0024361 Cd34 protein_coding protein_coding MGP_129S1SvImJ_T0024362.1 MGP_129S1SvImJ_G0016966.1 mouse_genomes_project 1 202110938 202122778 + Cd34 protein_coding retained_intron MGP_129S1SvImJ_T0024363.1 MGP_129S1SvImJ_G0016966.1 mouse_genomes_project 1 202110984 202113263 + Cd34 protein_coding retained_intron MGP_129S1SvImJ_T0024364.1 MGP_129S1SvImJ_G0016966.1 mouse_genomes_project 1 202111028 202132156 + MGP_129S1SvImJ_P0024364 Cd34 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0012125.1 MGP_129S1SvImJ_G0010214.1 mouse_genomes_project 1 80901224 80901488 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000638.1 MGP_129S1SvImJ_G0000577.1 mouse_genomes_project 1 131319517 131323400 - TEC TEC MGP_129S1SvImJ_T0005992.1 MGP_129S1SvImJ_G0005023.1 mouse_genomes_project 1 170135121 170162439 + Gm37184 lincRNA lincRNA MGP_129S1SvImJ_T0000746.1 MGP_129S1SvImJ_G0000683.1 mouse_genomes_project 1 166252221 166253559 - TEC TEC MGP_129S1SvImJ_T0002777.1 MGP_129S1SvImJ_G0002645.1 mouse_genomes_project 1 13708927 13724418 + Gm28095 antisense antisense MGP_129S1SvImJ_T0000832.1 MGP_129S1SvImJ_G0000766.1 mouse_genomes_project 1 202195335 202198026 + TEC TEC MGP_129S1SvImJ_T0000675.1 MGP_129S1SvImJ_G0000613.1 mouse_genomes_project 1 141925289 141928309 + TEC TEC MGP_129S1SvImJ_T0000676.1 MGP_129S1SvImJ_G0000613.1 mouse_genomes_project 1 141926208 141928309 + TEC TEC MGP_129S1SvImJ_T0021422.1 MGP_129S1SvImJ_G0016331.1 mouse_genomes_project 1 94559215 94585519 + MGP_129S1SvImJ_P0021422 Gpr35 protein_coding protein_coding MGP_129S1SvImJ_T0021423.1 MGP_129S1SvImJ_G0016331.1 mouse_genomes_project 1 94564514 94585842 + MGP_129S1SvImJ_P0021423 Gpr35 protein_coding protein_coding MGP_129S1SvImJ_T0021424.1 MGP_129S1SvImJ_G0016331.1 mouse_genomes_project 1 94575948 94587877 + MGP_129S1SvImJ_P0021424 Gpr35 protein_coding protein_coding MGP_129S1SvImJ_T0021425.1 MGP_129S1SvImJ_G0016331.1 mouse_genomes_project 1 94575948 94589086 + MGP_129S1SvImJ_P0021425 Gpr35 protein_coding protein_coding MGP_129S1SvImJ_T0021426.1 MGP_129S1SvImJ_G0016331.1 mouse_genomes_project 1 94578173 94588697 + MGP_129S1SvImJ_P0021426 Gpr35 protein_coding protein_coding MGP_129S1SvImJ_T0021427.1 MGP_129S1SvImJ_G0016331.1 mouse_genomes_project 1 94581748 94589224 + MGP_129S1SvImJ_P0021427 Gpr35 protein_coding protein_coding MGP_129S1SvImJ_T0018998.1 MGP_129S1SvImJ_G0015855.1 mouse_genomes_project 1 13709095 14022385 - MGP_129S1SvImJ_P0018998 Stau2 protein_coding protein_coding MGP_129S1SvImJ_T0018999.1 MGP_129S1SvImJ_G0015855.1 mouse_genomes_project 1 13709222 14022307 - MGP_129S1SvImJ_P0018999 Stau2 protein_coding protein_coding MGP_129S1SvImJ_T0019000.1 MGP_129S1SvImJ_G0015855.1 mouse_genomes_project 1 13709225 14022307 - MGP_129S1SvImJ_P0019000 Stau2 protein_coding protein_coding MGP_129S1SvImJ_T0019001.1 MGP_129S1SvImJ_G0015855.1 mouse_genomes_project 1 13709231 14022385 - MGP_129S1SvImJ_P0019001 Stau2 protein_coding protein_coding MGP_129S1SvImJ_T0019002.1 MGP_129S1SvImJ_G0015855.1 mouse_genomes_project 1 13709237 14024395 - MGP_129S1SvImJ_P0019002 Stau2 protein_coding protein_coding MGP_129S1SvImJ_T0019003.1 MGP_129S1SvImJ_G0015855.1 mouse_genomes_project 1 13836682 14022273 - MGP_129S1SvImJ_P0019003 Stau2 protein_coding protein_coding MGP_129S1SvImJ_T0019004.1 MGP_129S1SvImJ_G0015855.1 mouse_genomes_project 1 13837471 13869380 - Stau2 protein_coding processed_transcript MGP_129S1SvImJ_T0019005.1 MGP_129S1SvImJ_G0015855.1 mouse_genomes_project 1 13837564 14022319 - MGP_129S1SvImJ_P0019005 Stau2 protein_coding protein_coding MGP_129S1SvImJ_T0019006.1 MGP_129S1SvImJ_G0015855.1 mouse_genomes_project 1 13837572 14022332 - MGP_129S1SvImJ_P0019006 Stau2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019007.1 MGP_129S1SvImJ_G0015855.1 mouse_genomes_project 1 13838971 13975647 - MGP_129S1SvImJ_P0019007 Stau2 protein_coding protein_coding MGP_129S1SvImJ_T0019008.1 MGP_129S1SvImJ_G0015855.1 mouse_genomes_project 1 13888742 14022349 - MGP_129S1SvImJ_P0019008 Stau2 protein_coding protein_coding MGP_129S1SvImJ_T0019009.1 MGP_129S1SvImJ_G0015855.1 mouse_genomes_project 1 13939146 14024363 - MGP_129S1SvImJ_P0019009 Stau2 protein_coding protein_coding MGP_129S1SvImJ_T0019010.1 MGP_129S1SvImJ_G0015855.1 mouse_genomes_project 1 13953489 14022339 - MGP_129S1SvImJ_P0019010 Stau2 protein_coding protein_coding MGP_129S1SvImJ_T0019011.1 MGP_129S1SvImJ_G0015855.1 mouse_genomes_project 1 13953878 14024304 - MGP_129S1SvImJ_P0019011 Stau2 protein_coding protein_coding MGP_129S1SvImJ_T0019012.1 MGP_129S1SvImJ_G0015855.1 mouse_genomes_project 1 13953987 14024303 - MGP_129S1SvImJ_P0019012 Stau2 protein_coding protein_coding MGP_129S1SvImJ_T0023915.1 MGP_129S1SvImJ_G0016876.1 mouse_genomes_project 1 187366008 187373867 + MGP_129S1SvImJ_P0023915 Lefty2 protein_coding protein_coding MGP_129S1SvImJ_T0000640.1 MGP_129S1SvImJ_G0000579.1 mouse_genomes_project 1 131370083 131372837 + TEC TEC MGP_129S1SvImJ_T0012132.1 MGP_129S1SvImJ_G0010221.1 mouse_genomes_project 1 83745851 83746242 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024053.1 MGP_129S1SvImJ_G0016906.1 mouse_genomes_project 1 190641636 190668274 + MGP_129S1SvImJ_P0024053 Dusp10 protein_coding protein_coding MGP_129S1SvImJ_T0024056.1 MGP_129S1SvImJ_G0016906.1 mouse_genomes_project 1 190665386 190710016 + MGP_129S1SvImJ_P0024056 Dusp10 protein_coding protein_coding MGP_129S1SvImJ_T0023062.1 MGP_129S1SvImJ_G0016664.1 mouse_genomes_project 1 168155592 168175149 - MGP_129S1SvImJ_P0023062 Fmo4 protein_coding protein_coding MGP_129S1SvImJ_T0023063.1 MGP_129S1SvImJ_G0016664.1 mouse_genomes_project 1 168156287 168174026 - MGP_129S1SvImJ_P0023063 Fmo4 protein_coding protein_coding MGP_129S1SvImJ_T0023064.1 MGP_129S1SvImJ_G0016664.1 mouse_genomes_project 1 168164852 168175149 - Fmo4 protein_coding retained_intron MGP_129S1SvImJ_T0023065.1 MGP_129S1SvImJ_G0016664.1 mouse_genomes_project 1 168165609 168170474 - Fmo4 protein_coding retained_intron MGP_129S1SvImJ_T0023066.1 MGP_129S1SvImJ_G0016664.1 mouse_genomes_project 1 168169513 168175404 - MGP_129S1SvImJ_P0023066 Fmo4 protein_coding protein_coding MGP_129S1SvImJ_T0023067.1 MGP_129S1SvImJ_G0016664.1 mouse_genomes_project 1 168170284 168175450 - MGP_129S1SvImJ_P0023067 Fmo4 protein_coding protein_coding MGP_129S1SvImJ_T0021382.1 MGP_129S1SvImJ_G0016320.1 mouse_genomes_project 1 94178058 94179149 + MGP_129S1SvImJ_P0021382 Olfr1412 protein_coding protein_coding MGP_129S1SvImJ_T0000498.1 MGP_129S1SvImJ_G0000437.1 mouse_genomes_project 1 54194732 54196264 - TEC TEC MGP_129S1SvImJ_T0006062.1 MGP_129S1SvImJ_G0005076.1 mouse_genomes_project 1 193545642 193552283 + lincRNA lincRNA MGP_129S1SvImJ_T0012351.1 MGP_129S1SvImJ_G0010440.1 mouse_genomes_project 1 177514306 177514834 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023334.1 MGP_129S1SvImJ_G0016731.1 mouse_genomes_project 1 176001871 176005178 + MGP_129S1SvImJ_P0023334 1700015E13Rik protein_coding protein_coding MGP_129S1SvImJ_T0022781.1 MGP_129S1SvImJ_G0016618.1 mouse_genomes_project 1 160963964 160996043 - MGP_129S1SvImJ_P0022781 Tor1aip1 protein_coding protein_coding MGP_129S1SvImJ_T0022782.1 MGP_129S1SvImJ_G0016618.1 mouse_genomes_project 1 160963979 160997644 - MGP_129S1SvImJ_P0022782 Tor1aip1 protein_coding protein_coding MGP_129S1SvImJ_T0022783.1 MGP_129S1SvImJ_G0016618.1 mouse_genomes_project 1 160965600 160997697 - MGP_129S1SvImJ_P0022783 Tor1aip1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022784.1 MGP_129S1SvImJ_G0016618.1 mouse_genomes_project 1 160966146 160997697 - MGP_129S1SvImJ_P0022784 Tor1aip1 protein_coding protein_coding MGP_129S1SvImJ_T0022785.1 MGP_129S1SvImJ_G0016618.1 mouse_genomes_project 1 160966896 160994180 - MGP_129S1SvImJ_P0022785 Tor1aip1 protein_coding protein_coding MGP_129S1SvImJ_T0022786.1 MGP_129S1SvImJ_G0016618.1 mouse_genomes_project 1 160966937 160997697 - MGP_129S1SvImJ_P0022786 Tor1aip1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022787.1 MGP_129S1SvImJ_G0016618.1 mouse_genomes_project 1 160966937 160996106 - MGP_129S1SvImJ_P0022787 Tor1aip1 protein_coding protein_coding MGP_129S1SvImJ_T0022788.1 MGP_129S1SvImJ_G0016618.1 mouse_genomes_project 1 160978649 160979943 - Tor1aip1 protein_coding retained_intron MGP_129S1SvImJ_T0022789.1 MGP_129S1SvImJ_G0016618.1 mouse_genomes_project 1 160983638 160997267 - MGP_129S1SvImJ_P0022789 Tor1aip1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022790.1 MGP_129S1SvImJ_G0016618.1 mouse_genomes_project 1 160991439 160997364 - Tor1aip1 protein_coding retained_intron MGP_129S1SvImJ_T0019013.1 MGP_129S1SvImJ_G0015856.1 mouse_genomes_project 1 14043624 14129646 - MGP_129S1SvImJ_P0019013 Ube2w protein_coding protein_coding MGP_129S1SvImJ_T0019014.1 MGP_129S1SvImJ_G0015856.1 mouse_genomes_project 1 14069170 14092391 - Ube2w protein_coding processed_transcript MGP_129S1SvImJ_T0019015.1 MGP_129S1SvImJ_G0015856.1 mouse_genomes_project 1 14075671 14129823 - MGP_129S1SvImJ_P0019015 Ube2w protein_coding protein_coding MGP_129S1SvImJ_T0019016.1 MGP_129S1SvImJ_G0015856.1 mouse_genomes_project 1 14088928 14129593 - MGP_129S1SvImJ_P0019016 Ube2w protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019017.1 MGP_129S1SvImJ_G0015856.1 mouse_genomes_project 1 14091150 14129618 - Ube2w protein_coding retained_intron MGP_129S1SvImJ_T0019018.1 MGP_129S1SvImJ_G0015856.1 mouse_genomes_project 1 14111327 14129618 - Ube2w protein_coding retained_intron MGP_129S1SvImJ_T0002801.1 MGP_129S1SvImJ_G0002663.1 mouse_genomes_project 1 36250584 36251698 + 4930556I23Rik antisense antisense MGP_129S1SvImJ_T0012006.1 MGP_129S1SvImJ_G0010095.1 mouse_genomes_project 1 43056102 43056282 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099133.1 MGP_129S1SvImJ_G0037200.1 mouse_genomes_project 1 176487295 176487402 - Gm23523 snRNA snRNA MGP_129S1SvImJ_T0005889.1 MGP_129S1SvImJ_G0004941.1 mouse_genomes_project 1 116360019 116426562 - 9330185C12Rik lincRNA lincRNA MGP_129S1SvImJ_T0002991.1 MGP_129S1SvImJ_G0002809.1 mouse_genomes_project 1 191626357 191645643 + Gm38251 antisense antisense MGP_129S1SvImJ_T0023004.1 MGP_129S1SvImJ_G0016654.1 mouse_genomes_project 1 167088075 167097784 - MGP_129S1SvImJ_P0023004 Fasl protein_coding protein_coding MGP_129S1SvImJ_T0023005.1 MGP_129S1SvImJ_G0016654.1 mouse_genomes_project 1 167088808 167097647 - MGP_129S1SvImJ_P0023005 Fasl protein_coding protein_coding MGP_129S1SvImJ_T0000418.1 MGP_129S1SvImJ_G0000360.1 mouse_genomes_project 1 13688595 13690916 - TEC TEC MGP_129S1SvImJ_T0005928.1 MGP_129S1SvImJ_G0004973.1 mouse_genomes_project 1 138332627 138336911 - Gm26783 lincRNA lincRNA MGP_129S1SvImJ_T0099091.1 MGP_129S1SvImJ_G0037158.1 mouse_genomes_project 1 70339599 70339725 - Gm23879 snRNA snRNA MGP_129S1SvImJ_T0000444.1 MGP_129S1SvImJ_G0000384.1 mouse_genomes_project 1 23651909 23655206 - TEC TEC MGP_129S1SvImJ_T0012236.1 MGP_129S1SvImJ_G0010325.1 mouse_genomes_project 1 124836993 124838302 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020702.1 MGP_129S1SvImJ_G0016181.1 mouse_genomes_project 1 75800498 75809765 + MGP_129S1SvImJ_P0020702 Dnajb2 protein_coding protein_coding MGP_129S1SvImJ_T0020703.1 MGP_129S1SvImJ_G0016181.1 mouse_genomes_project 1 75800553 75808881 + MGP_129S1SvImJ_P0020703 Dnajb2 protein_coding protein_coding MGP_129S1SvImJ_T0020704.1 MGP_129S1SvImJ_G0016181.1 mouse_genomes_project 1 75800553 75808881 + MGP_129S1SvImJ_P0020704 Dnajb2 protein_coding protein_coding MGP_129S1SvImJ_T0020705.1 MGP_129S1SvImJ_G0016181.1 mouse_genomes_project 1 75800557 75809769 + MGP_129S1SvImJ_P0020705 Dnajb2 protein_coding protein_coding MGP_129S1SvImJ_T0020706.1 MGP_129S1SvImJ_G0016181.1 mouse_genomes_project 1 75800575 75809767 + MGP_129S1SvImJ_P0020706 Dnajb2 protein_coding protein_coding MGP_129S1SvImJ_T0020707.1 MGP_129S1SvImJ_G0016181.1 mouse_genomes_project 1 75800601 75809132 + MGP_129S1SvImJ_P0020707 Dnajb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020708.1 MGP_129S1SvImJ_G0016181.1 mouse_genomes_project 1 75800644 75809767 + MGP_129S1SvImJ_P0020708 Dnajb2 protein_coding protein_coding MGP_129S1SvImJ_T0020709.1 MGP_129S1SvImJ_G0016181.1 mouse_genomes_project 1 75800702 75803422 + MGP_129S1SvImJ_P0020709 Dnajb2 protein_coding protein_coding MGP_129S1SvImJ_T0020710.1 MGP_129S1SvImJ_G0016181.1 mouse_genomes_project 1 75800860 75801770 + Dnajb2 protein_coding retained_intron MGP_129S1SvImJ_T0020711.1 MGP_129S1SvImJ_G0016181.1 mouse_genomes_project 1 75801163 75801613 + Dnajb2 protein_coding retained_intron MGP_129S1SvImJ_T0020712.1 MGP_129S1SvImJ_G0016181.1 mouse_genomes_project 1 75803012 75804998 + Dnajb2 protein_coding retained_intron MGP_129S1SvImJ_T0020713.1 MGP_129S1SvImJ_G0016181.1 mouse_genomes_project 1 75805485 75809004 + MGP_129S1SvImJ_P0020713 Dnajb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0100381.1 MGP_129S1SvImJ_G0038448.1 mouse_genomes_project 1 158961796 158961901 - Gm25336 snoRNA snoRNA MGP_129S1SvImJ_T0000681.1 MGP_129S1SvImJ_G0000618.1 mouse_genomes_project 1 142286331 142286751 + TEC TEC MGP_129S1SvImJ_T0101825.1 MGP_129S1SvImJ_G0039783.1 mouse_genomes_project 1 15611884 15635736 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101826.1 MGP_129S1SvImJ_G0039783.1 mouse_genomes_project 1 15625082 15635215 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0000678.1 MGP_129S1SvImJ_G0000615.1 mouse_genomes_project 1 141949524 141954753 + TEC TEC MGP_129S1SvImJ_T0002983.1 MGP_129S1SvImJ_G0002803.1 mouse_genomes_project 1 185226252 185246668 - Gm16564 antisense antisense MGP_129S1SvImJ_T0023502.1 MGP_129S1SvImJ_G0016765.1 mouse_genomes_project 1 177332321 177340062 - MGP_129S1SvImJ_P0023502 Itln1 protein_coding protein_coding MGP_129S1SvImJ_T0000823.1 MGP_129S1SvImJ_G0000757.1 mouse_genomes_project 1 200355679 200357901 - TEC TEC MGP_129S1SvImJ_T0009535.1 MGP_129S1SvImJ_G0007651.1 mouse_genomes_project 1 102776182 102776291 + Gm25537 miRNA miRNA MGP_129S1SvImJ_T0009506.1 MGP_129S1SvImJ_G0007622.1 mouse_genomes_project 1 63421271 63421409 - Gm24513 miRNA miRNA MGP_129S1SvImJ_T0020241.1 MGP_129S1SvImJ_G0016094.1 mouse_genomes_project 1 64203618 64297220 - MGP_129S1SvImJ_P0020241 Klf7 protein_coding protein_coding MGP_129S1SvImJ_T0020242.1 MGP_129S1SvImJ_G0016094.1 mouse_genomes_project 1 64216993 64297211 - MGP_129S1SvImJ_P0020242 Klf7 protein_coding protein_coding MGP_129S1SvImJ_T0020243.1 MGP_129S1SvImJ_G0016094.1 mouse_genomes_project 1 64254955 64299549 - MGP_129S1SvImJ_P0020243 Klf7 protein_coding protein_coding MGP_129S1SvImJ_T0005856.1 MGP_129S1SvImJ_G0004914.1 mouse_genomes_project 1 93018316 93020067 + Gm28382 lincRNA lincRNA MGP_129S1SvImJ_T0098773.1 MGP_129S1SvImJ_G0036858.1 mouse_genomes_project 1 36738770 36739781 - Gm37062 sense_intronic sense_intronic MGP_129S1SvImJ_T0002804.1 MGP_129S1SvImJ_G0002666.1 mouse_genomes_project 1 36901711 36911876 + Gm16150 antisense antisense MGP_129S1SvImJ_T0002805.1 MGP_129S1SvImJ_G0002666.1 mouse_genomes_project 1 36905972 36912939 + Gm16150 antisense antisense MGP_129S1SvImJ_T0098411.1 MGP_129S1SvImJ_G0036496.1 mouse_genomes_project 1 24918426 24918545 - n-R5s209 rRNA rRNA MGP_129S1SvImJ_T0005985.1 MGP_129S1SvImJ_G0005016.1 mouse_genomes_project 1 168694880 168696703 - Gm26523 lincRNA lincRNA MGP_129S1SvImJ_T0023737.1 MGP_129S1SvImJ_G0016843.1 mouse_genomes_project 1 182061611 182410029 - MGP_129S1SvImJ_P0023737 Pld5 protein_coding protein_coding MGP_129S1SvImJ_T0023738.1 MGP_129S1SvImJ_G0016843.1 mouse_genomes_project 1 182061712 182410043 - MGP_129S1SvImJ_P0023738 Pld5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023739.1 MGP_129S1SvImJ_G0016843.1 mouse_genomes_project 1 182063024 182345236 - MGP_129S1SvImJ_P0023739 Pld5 protein_coding protein_coding MGP_129S1SvImJ_T0023741.1 MGP_129S1SvImJ_G0016843.1 mouse_genomes_project 1 182103939 182410006 - Pld5 protein_coding retained_intron MGP_129S1SvImJ_T0023742.1 MGP_129S1SvImJ_G0016843.1 mouse_genomes_project 1 182157153 182345135 - Pld5 protein_coding retained_intron MGP_129S1SvImJ_T0023743.1 MGP_129S1SvImJ_G0016843.1 mouse_genomes_project 1 182395486 182410005 - MGP_129S1SvImJ_P0023743 Pld5 protein_coding protein_coding MGP_129S1SvImJ_T0098786.1 MGP_129S1SvImJ_G0036870.1 mouse_genomes_project 1 107670361 107670814 - Gm28404 sense_intronic sense_intronic MGP_129S1SvImJ_T0021078.1 MGP_129S1SvImJ_G0016252.1 mouse_genomes_project 1 87973652 87978033 - MGP_129S1SvImJ_P0021078 Nppc protein_coding protein_coding MGP_129S1SvImJ_T0023669.1 MGP_129S1SvImJ_G0016816.1 mouse_genomes_project 1 179851943 179858080 - protein_coding processed_transcript MGP_129S1SvImJ_T0019647.1 MGP_129S1SvImJ_G0015987.1 mouse_genomes_project 1 43147156 43159407 - MGP_129S1SvImJ_P0019647 Kdelc1 protein_coding protein_coding MGP_129S1SvImJ_T0019648.1 MGP_129S1SvImJ_G0015987.1 mouse_genomes_project 1 43147495 43159352 - Kdelc1 protein_coding retained_intron MGP_129S1SvImJ_T0019649.1 MGP_129S1SvImJ_G0015987.1 mouse_genomes_project 1 43147497 43159364 - MGP_129S1SvImJ_P0019649 Kdelc1 protein_coding protein_coding MGP_129S1SvImJ_T0019650.1 MGP_129S1SvImJ_G0015987.1 mouse_genomes_project 1 43152693 43159364 - Kdelc1 protein_coding retained_intron MGP_129S1SvImJ_T0019651.1 MGP_129S1SvImJ_G0015987.1 mouse_genomes_project 1 43155394 43159300 - MGP_129S1SvImJ_P0019651 Kdelc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0012348.1 MGP_129S1SvImJ_G0010437.1 mouse_genomes_project 1 176689686 176689981 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012042.1 MGP_129S1SvImJ_G0010131.1 mouse_genomes_project 1 51441663 51442353 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020480.1 MGP_129S1SvImJ_G0016145.1 mouse_genomes_project 1 74867784 74872683 - MGP_129S1SvImJ_P0020480 Aamp protein_coding protein_coding MGP_129S1SvImJ_T0020481.1 MGP_129S1SvImJ_G0016145.1 mouse_genomes_project 1 74867790 74871961 - Aamp protein_coding retained_intron MGP_129S1SvImJ_T0020482.1 MGP_129S1SvImJ_G0016145.1 mouse_genomes_project 1 74867790 74872625 - MGP_129S1SvImJ_P0020482 Aamp protein_coding protein_coding MGP_129S1SvImJ_T0020483.1 MGP_129S1SvImJ_G0016145.1 mouse_genomes_project 1 74868877 74871924 - MGP_129S1SvImJ_P0020483 Aamp protein_coding protein_coding MGP_129S1SvImJ_T0020484.1 MGP_129S1SvImJ_G0016145.1 mouse_genomes_project 1 74869004 74871087 - Aamp protein_coding retained_intron MGP_129S1SvImJ_T0020485.1 MGP_129S1SvImJ_G0016145.1 mouse_genomes_project 1 74871140 74872366 - MGP_129S1SvImJ_P0020485 Aamp protein_coding protein_coding MGP_129S1SvImJ_T0012199.1 MGP_129S1SvImJ_G0010288.1 mouse_genomes_project 1 111890473 111890660 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000566.1 MGP_129S1SvImJ_G0000505.1 mouse_genomes_project 1 84410995 84411798 - TEC TEC MGP_129S1SvImJ_T0000689.1 MGP_129S1SvImJ_G0000626.1 mouse_genomes_project 1 144411869 144415235 + TEC TEC MGP_129S1SvImJ_T0012294.1 MGP_129S1SvImJ_G0010383.1 mouse_genomes_project 1 153641787 153643790 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098794.1 MGP_129S1SvImJ_G0036878.1 mouse_genomes_project 1 157660046 157661840 - Gm28791 sense_intronic sense_intronic MGP_129S1SvImJ_T0005735.1 MGP_129S1SvImJ_G0004818.1 mouse_genomes_project 1 42219031 42276101 - Gm29040 lincRNA lincRNA MGP_129S1SvImJ_T0019192.1 MGP_129S1SvImJ_G0015902.1 mouse_genomes_project 1 32083382 32088508 + Rab23 protein_coding processed_transcript MGP_129S1SvImJ_T0019193.1 MGP_129S1SvImJ_G0015902.1 mouse_genomes_project 1 32083382 32091562 + Rab23 protein_coding retained_intron MGP_129S1SvImJ_T0019194.1 MGP_129S1SvImJ_G0015902.1 mouse_genomes_project 1 32083390 32109724 + MGP_129S1SvImJ_P0019194 Rab23 protein_coding protein_coding MGP_129S1SvImJ_T0019195.1 MGP_129S1SvImJ_G0015902.1 mouse_genomes_project 1 32083404 32109717 + MGP_129S1SvImJ_P0019195 Rab23 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019196.1 MGP_129S1SvImJ_G0015902.1 mouse_genomes_project 1 32083405 32090147 + Rab23 protein_coding retained_intron MGP_129S1SvImJ_T0019197.1 MGP_129S1SvImJ_G0015902.1 mouse_genomes_project 1 32083633 32101993 + Rab23 protein_coding retained_intron MGP_129S1SvImJ_T0019198.1 MGP_129S1SvImJ_G0015902.1 mouse_genomes_project 1 32083902 32109721 + MGP_129S1SvImJ_P0019198 Rab23 protein_coding protein_coding MGP_129S1SvImJ_T0019199.1 MGP_129S1SvImJ_G0015902.1 mouse_genomes_project 1 32101166 32107871 + Rab23 protein_coding retained_intron MGP_129S1SvImJ_T0019200.1 MGP_129S1SvImJ_G0015902.1 mouse_genomes_project 1 32103192 32106530 + Rab23 protein_coding retained_intron MGP_129S1SvImJ_T0019201.1 MGP_129S1SvImJ_G0015902.1 mouse_genomes_project 1 32105296 32107932 + Rab23 protein_coding retained_intron MGP_129S1SvImJ_T0012115.1 MGP_129S1SvImJ_G0010204.1 mouse_genomes_project 1 73868883 73869217 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024225.1 MGP_129S1SvImJ_G0016940.1 mouse_genomes_project 1 198189842 198192076 - MGP_129S1SvImJ_P0024225 Fam71a protein_coding protein_coding MGP_129S1SvImJ_T0023283.1 MGP_129S1SvImJ_G0016716.1 mouse_genomes_project 1 173182597 173228979 + MGP_129S1SvImJ_P0023283 Rxrg protein_coding protein_coding MGP_129S1SvImJ_T0023046.1 MGP_129S1SvImJ_G0016662.1 mouse_genomes_project 1 167989482 167999146 - 7420461P10Rik protein_coding processed_transcript MGP_129S1SvImJ_T0023047.1 MGP_129S1SvImJ_G0016662.1 mouse_genomes_project 1 167989482 168000411 - MGP_129S1SvImJ_P0023047 7420461P10Rik protein_coding protein_coding MGP_129S1SvImJ_T0023048.1 MGP_129S1SvImJ_G0016662.1 mouse_genomes_project 1 167989492 168000524 - MGP_129S1SvImJ_P0023048 7420461P10Rik protein_coding protein_coding MGP_129S1SvImJ_T0022031.1 MGP_129S1SvImJ_G0016465.1 mouse_genomes_project 1 135485238 135531596 - MGP_129S1SvImJ_P0022031 Mfsd4a protein_coding protein_coding MGP_129S1SvImJ_T0022032.1 MGP_129S1SvImJ_G0016465.1 mouse_genomes_project 1 135485681 135491474 - Mfsd4a protein_coding retained_intron MGP_129S1SvImJ_T0022033.1 MGP_129S1SvImJ_G0016465.1 mouse_genomes_project 1 135489070 135531650 - MGP_129S1SvImJ_P0022033 Mfsd4a protein_coding protein_coding MGP_129S1SvImJ_T0022034.1 MGP_129S1SvImJ_G0016465.1 mouse_genomes_project 1 135489257 135531511 - MGP_129S1SvImJ_P0022034 Mfsd4a protein_coding protein_coding MGP_129S1SvImJ_T0022035.1 MGP_129S1SvImJ_G0016465.1 mouse_genomes_project 1 135489257 135531648 - MGP_129S1SvImJ_P0022035 Mfsd4a protein_coding protein_coding MGP_129S1SvImJ_T0022036.1 MGP_129S1SvImJ_G0016465.1 mouse_genomes_project 1 135489285 135531747 - MGP_129S1SvImJ_P0022036 Mfsd4a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022037.1 MGP_129S1SvImJ_G0016465.1 mouse_genomes_project 1 135499152 135531577 - MGP_129S1SvImJ_P0022037 Mfsd4a protein_coding protein_coding MGP_129S1SvImJ_T0022038.1 MGP_129S1SvImJ_G0016465.1 mouse_genomes_project 1 135499161 135531618 - MGP_129S1SvImJ_P0022038 Mfsd4a protein_coding protein_coding MGP_129S1SvImJ_T0022039.1 MGP_129S1SvImJ_G0016465.1 mouse_genomes_project 1 135501193 135504277 - Mfsd4a protein_coding processed_transcript MGP_129S1SvImJ_T0022040.1 MGP_129S1SvImJ_G0016465.1 mouse_genomes_project 1 135501297 135531585 - MGP_129S1SvImJ_P0022040 Mfsd4a protein_coding protein_coding MGP_129S1SvImJ_T0022041.1 MGP_129S1SvImJ_G0016465.1 mouse_genomes_project 1 135503023 135510272 - Mfsd4a protein_coding retained_intron MGP_129S1SvImJ_T0022042.1 MGP_129S1SvImJ_G0016465.1 mouse_genomes_project 1 135510149 135517868 - MGP_129S1SvImJ_P0022042 Mfsd4a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0011873.1 MGP_129S1SvImJ_G0009962.1 mouse_genomes_project 1 1726755 1727961 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024187.1 MGP_129S1SvImJ_G0016933.1 mouse_genomes_project 1 197935049 197957404 + MGP_129S1SvImJ_P0024187 Angel2 protein_coding protein_coding MGP_129S1SvImJ_T0024188.1 MGP_129S1SvImJ_G0016933.1 mouse_genomes_project 1 197938428 197948886 + Angel2 protein_coding retained_intron MGP_129S1SvImJ_T0024189.1 MGP_129S1SvImJ_G0016933.1 mouse_genomes_project 1 197938428 197957404 + MGP_129S1SvImJ_P0024189 Angel2 protein_coding protein_coding MGP_129S1SvImJ_T0024190.1 MGP_129S1SvImJ_G0016933.1 mouse_genomes_project 1 197938428 197957404 + MGP_129S1SvImJ_P0024190 Angel2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024191.1 MGP_129S1SvImJ_G0016933.1 mouse_genomes_project 1 197938428 197957404 + MGP_129S1SvImJ_P0024191 Angel2 protein_coding protein_coding MGP_129S1SvImJ_T0024192.1 MGP_129S1SvImJ_G0016933.1 mouse_genomes_project 1 197938922 197948153 + MGP_129S1SvImJ_P0024192 Angel2 protein_coding protein_coding MGP_129S1SvImJ_T0024193.1 MGP_129S1SvImJ_G0016933.1 mouse_genomes_project 1 197938946 197957404 + Angel2 protein_coding processed_transcript MGP_129S1SvImJ_T0024194.1 MGP_129S1SvImJ_G0016933.1 mouse_genomes_project 1 197938951 197947928 + MGP_129S1SvImJ_P0024194 Angel2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024195.1 MGP_129S1SvImJ_G0016933.1 mouse_genomes_project 1 197938953 197948456 + Angel2 protein_coding retained_intron MGP_129S1SvImJ_T0024196.1 MGP_129S1SvImJ_G0016933.1 mouse_genomes_project 1 197947702 197949720 + Angel2 protein_coding retained_intron MGP_129S1SvImJ_T0100374.1 MGP_129S1SvImJ_G0038441.1 mouse_genomes_project 1 141297212 141297309 - Gm23534 snoRNA snoRNA MGP_129S1SvImJ_T0099073.1 MGP_129S1SvImJ_G0037140.1 mouse_genomes_project 1 31643760 31643860 + Gm25792 snRNA snRNA MGP_129S1SvImJ_T0012078.1 MGP_129S1SvImJ_G0010167.1 mouse_genomes_project 1 61210127 61212754 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000817.1 MGP_129S1SvImJ_G0000752.1 mouse_genomes_project 1 198279349 198281196 + TEC TEC MGP_129S1SvImJ_T0017038.1 MGP_129S1SvImJ_G0015105.1 mouse_genomes_project 1 87613628 87623530 + C130036L24Rik processed_transcript retained_intron MGP_129S1SvImJ_T0017039.1 MGP_129S1SvImJ_G0015105.1 mouse_genomes_project 1 87613638 87631126 + C130036L24Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017040.1 MGP_129S1SvImJ_G0015105.1 mouse_genomes_project 1 87613642 87616832 + C130036L24Rik processed_transcript retained_intron MGP_129S1SvImJ_T0000568.1 MGP_129S1SvImJ_G0000507.1 mouse_genomes_project 1 85422262 85425159 - TEC TEC MGP_129S1SvImJ_T0012393.1 MGP_129S1SvImJ_G0010482.1 mouse_genomes_project 1 199956223 199956695 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011940.1 MGP_129S1SvImJ_G0010029.1 mouse_genomes_project 1 19218684 19219808 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017071.1 MGP_129S1SvImJ_G0015114.1 mouse_genomes_project 1 140242280 140245883 - 9230116N13Rik processed_transcript antisense MGP_129S1SvImJ_T0017072.1 MGP_129S1SvImJ_G0015114.1 mouse_genomes_project 1 140243207 140245858 - 9230116N13Rik processed_transcript retained_intron MGP_129S1SvImJ_T0099068.1 MGP_129S1SvImJ_G0037135.1 mouse_genomes_project 1 23342204 23342308 + Gm25294 snRNA snRNA MGP_129S1SvImJ_T0022620.1 MGP_129S1SvImJ_G0016585.1 mouse_genomes_project 1 156603273 156855182 - MGP_129S1SvImJ_P0022620 1700025G04Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022621.1 MGP_129S1SvImJ_G0016585.1 mouse_genomes_project 1 156636917 156855337 - MGP_129S1SvImJ_P0022621 1700025G04Rik protein_coding protein_coding MGP_129S1SvImJ_T0022622.1 MGP_129S1SvImJ_G0016585.1 mouse_genomes_project 1 156645244 156675281 - 1700025G04Rik protein_coding retained_intron MGP_129S1SvImJ_T0022623.1 MGP_129S1SvImJ_G0016585.1 mouse_genomes_project 1 156645581 156820551 - MGP_129S1SvImJ_P0022623 1700025G04Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0002931.1 MGP_129S1SvImJ_G0002761.1 mouse_genomes_project 1 156061758 156066224 - Gm10138 antisense antisense MGP_129S1SvImJ_T0002932.1 MGP_129S1SvImJ_G0002761.1 mouse_genomes_project 1 156064859 156067379 - Gm10138 antisense antisense MGP_129S1SvImJ_T0002933.1 MGP_129S1SvImJ_G0002761.1 mouse_genomes_project 1 156066510 156066884 - Gm10138 antisense pseudogene MGP_129S1SvImJ_T0023717.1 MGP_129S1SvImJ_G0016838.1 mouse_genomes_project 1 181763864 181794280 - MGP_129S1SvImJ_P0023717 Opn3 protein_coding protein_coding MGP_129S1SvImJ_T0002892.1 MGP_129S1SvImJ_G0002731.1 mouse_genomes_project 1 122269485 122275735 - Gm27184 antisense antisense MGP_129S1SvImJ_T0002786.1 MGP_129S1SvImJ_G0002650.1 mouse_genomes_project 1 15303739 15373449 - Gm28153 antisense antisense MGP_129S1SvImJ_T0011902.1 MGP_129S1SvImJ_G0009991.1 mouse_genomes_project 1 6709869 6712054 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020823.1 MGP_129S1SvImJ_G0016197.1 mouse_genomes_project 1 79027013 79141299 + MGP_129S1SvImJ_P0020823 Sgpp2 protein_coding protein_coding MGP_129S1SvImJ_T0020832.1 MGP_129S1SvImJ_G0016200.1 mouse_genomes_project 1 79240344 79257594 + MGP_129S1SvImJ_P0020832 Mogat1 protein_coding protein_coding MGP_129S1SvImJ_T0020833.1 MGP_129S1SvImJ_G0016200.1 mouse_genomes_project 1 79240513 79259134 + MGP_129S1SvImJ_P0020833 Mogat1 protein_coding protein_coding MGP_129S1SvImJ_T0020834.1 MGP_129S1SvImJ_G0016200.1 mouse_genomes_project 1 79240522 79268167 + MGP_129S1SvImJ_P0020834 Mogat1 protein_coding protein_coding MGP_129S1SvImJ_T0020835.1 MGP_129S1SvImJ_G0016200.1 mouse_genomes_project 1 79241168 79252770 + MGP_129S1SvImJ_P0020835 Mogat1 protein_coding protein_coding MGP_129S1SvImJ_T0020836.1 MGP_129S1SvImJ_G0016200.1 mouse_genomes_project 1 79241223 79268169 + MGP_129S1SvImJ_P0020836 Mogat1 protein_coding protein_coding MGP_129S1SvImJ_T0020837.1 MGP_129S1SvImJ_G0016200.1 mouse_genomes_project 1 79267623 79268169 + Mogat1 protein_coding processed_transcript MGP_129S1SvImJ_T0102095.1 MGP_129S1SvImJ_G0039930.1 mouse_genomes_project 1 179671074 179675397 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099117.1 MGP_129S1SvImJ_G0037184.1 mouse_genomes_project 1 137927440 137927547 - Gm24517 snRNA snRNA MGP_129S1SvImJ_T0012346.1 MGP_129S1SvImJ_G0010435.1 mouse_genomes_project 1 175227048 175228204 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024071.1 MGP_129S1SvImJ_G0016911.1 mouse_genomes_project 1 191571040 191582273 - MGP_129S1SvImJ_P0024071 C130074G19Rik protein_coding protein_coding MGP_129S1SvImJ_T0003009.1 MGP_129S1SvImJ_G0002825.1 mouse_genomes_project 1 198100794 198101652 - Gm38188 antisense antisense MGP_129S1SvImJ_T0002789.1 MGP_129S1SvImJ_G0002653.1 mouse_genomes_project 1 18710947 18712582 + Gm28287 antisense antisense MGP_129S1SvImJ_T0020895.1 MGP_129S1SvImJ_G0016214.1 mouse_genomes_project 1 83141772 83144594 + MGP_129S1SvImJ_P0020895 Gm9747 protein_coding protein_coding MGP_129S1SvImJ_T0023623.1 MGP_129S1SvImJ_G0016792.1 mouse_genomes_project 1 178429734 178437550 + MGP_129S1SvImJ_P0023623 Vsig8 protein_coding protein_coding MGP_129S1SvImJ_T0023624.1 MGP_129S1SvImJ_G0016792.1 mouse_genomes_project 1 178433821 178437549 + MGP_129S1SvImJ_P0023624 Vsig8 protein_coding protein_coding MGP_129S1SvImJ_T0019052.1 MGP_129S1SvImJ_G0015866.1 mouse_genomes_project 1 15842547 15855709 - MGP_129S1SvImJ_P0019052 Defb41 protein_coding protein_coding MGP_129S1SvImJ_T0019053.1 MGP_129S1SvImJ_G0015866.1 mouse_genomes_project 1 15850443 15855651 - MGP_129S1SvImJ_P0019053 Defb41 protein_coding protein_coding MGP_129S1SvImJ_T0021445.1 MGP_129S1SvImJ_G0016336.1 mouse_genomes_project 1 94778441 94843224 + MGP_129S1SvImJ_P0021445 Crocc2 protein_coding protein_coding MGP_129S1SvImJ_T0021446.1 MGP_129S1SvImJ_G0016336.1 mouse_genomes_project 1 94778441 94841009 + MGP_129S1SvImJ_P0021446 Crocc2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0000704.1 MGP_129S1SvImJ_G0000641.1 mouse_genomes_project 1 155757172 155759268 + TEC TEC MGP_129S1SvImJ_T0019657.1 MGP_129S1SvImJ_G0015989.1 mouse_genomes_project 1 43189071 43190886 + Ercc5 protein_coding retained_intron MGP_129S1SvImJ_T0019658.1 MGP_129S1SvImJ_G0015989.1 mouse_genomes_project 1 43189174 43223399 + Ercc5 protein_coding retained_intron MGP_129S1SvImJ_T0019659.1 MGP_129S1SvImJ_G0015989.1 mouse_genomes_project 1 43189174 43223399 + MGP_129S1SvImJ_P0019659 Ercc5 protein_coding protein_coding MGP_129S1SvImJ_T0019660.1 MGP_129S1SvImJ_G0015989.1 mouse_genomes_project 1 43189236 43200906 + Ercc5 protein_coding processed_transcript MGP_129S1SvImJ_T0019661.1 MGP_129S1SvImJ_G0015989.1 mouse_genomes_project 1 43189259 43197315 + Ercc5 protein_coding processed_transcript MGP_129S1SvImJ_T0019662.1 MGP_129S1SvImJ_G0015989.1 mouse_genomes_project 1 43196004 43206061 + Ercc5 protein_coding retained_intron MGP_129S1SvImJ_T0019663.1 MGP_129S1SvImJ_G0015989.1 mouse_genomes_project 1 43197889 43206280 + Ercc5 protein_coding retained_intron MGP_129S1SvImJ_T0009478.1 MGP_129S1SvImJ_G0007594.1 mouse_genomes_project 1 10629036 10629118 + Gm27881 miRNA miRNA MGP_129S1SvImJ_T0012395.1 MGP_129S1SvImJ_G0010484.1 mouse_genomes_project 1 200576329 200576732 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022240.1 MGP_129S1SvImJ_G0016509.1 mouse_genomes_project 1 138162770 138179422 + MGP_129S1SvImJ_P0022240 Rabif protein_coding protein_coding MGP_129S1SvImJ_T0012198.1 MGP_129S1SvImJ_G0010287.1 mouse_genomes_project 1 111299176 111300303 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012081.1 MGP_129S1SvImJ_G0010170.1 mouse_genomes_project 1 62081261 62081539 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023503.1 MGP_129S1SvImJ_G0016766.1 mouse_genomes_project 1 177388677 177393222 + Cd244 protein_coding retained_intron MGP_129S1SvImJ_T0023504.1 MGP_129S1SvImJ_G0016766.1 mouse_genomes_project 1 177388677 177436588 + MGP_129S1SvImJ_P0023504 Cd244 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023505.1 MGP_129S1SvImJ_G0016766.1 mouse_genomes_project 1 177388677 177406369 + MGP_129S1SvImJ_P0023505 Cd244 protein_coding protein_coding MGP_129S1SvImJ_T0023506.1 MGP_129S1SvImJ_G0016766.1 mouse_genomes_project 1 177394038 177406369 + Cd244 protein_coding retained_intron MGP_129S1SvImJ_T0000605.1 MGP_129S1SvImJ_G0000544.1 mouse_genomes_project 1 107820939 107826059 + TEC TEC MGP_129S1SvImJ_T0002854.1 MGP_129S1SvImJ_G0002700.1 mouse_genomes_project 1 74869105 74869811 + Gm28364 antisense antisense MGP_129S1SvImJ_T0012219.1 MGP_129S1SvImJ_G0010308.1 mouse_genomes_project 1 120707910 120708252 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006028.1 MGP_129S1SvImJ_G0005053.1 mouse_genomes_project 1 188206716 188231736 + lincRNA lincRNA MGP_129S1SvImJ_T0006029.1 MGP_129S1SvImJ_G0005053.1 mouse_genomes_project 1 188206742 188221962 + lincRNA lincRNA MGP_129S1SvImJ_T0100344.1 MGP_129S1SvImJ_G0038411.1 mouse_genomes_project 1 66555918 66556055 + Gm24729 snoRNA snoRNA MGP_129S1SvImJ_T0022537.1 MGP_129S1SvImJ_G0016571.1 mouse_genomes_project 1 154451589 154558539 - MGP_129S1SvImJ_P0022537 Pla2g4a protein_coding protein_coding MGP_129S1SvImJ_T0022538.1 MGP_129S1SvImJ_G0016571.1 mouse_genomes_project 1 154451600 154547493 - MGP_129S1SvImJ_P0022538 Pla2g4a protein_coding protein_coding MGP_129S1SvImJ_T0022539.1 MGP_129S1SvImJ_G0016571.1 mouse_genomes_project 1 154509293 154588872 - MGP_129S1SvImJ_P0022539 Pla2g4a protein_coding protein_coding MGP_129S1SvImJ_T0022540.1 MGP_129S1SvImJ_G0016571.1 mouse_genomes_project 1 154509333 154525782 - Pla2g4a protein_coding processed_transcript MGP_129S1SvImJ_T0022541.1 MGP_129S1SvImJ_G0016571.1 mouse_genomes_project 1 154543932 154588898 - Pla2g4a protein_coding retained_intron MGP_129S1SvImJ_T0022542.1 MGP_129S1SvImJ_G0016571.1 mouse_genomes_project 1 154558342 154588869 - Pla2g4a protein_coding processed_transcript MGP_129S1SvImJ_T0005936.1 MGP_129S1SvImJ_G0004981.1 mouse_genomes_project 1 140530214 140548167 + Gm19705 lincRNA lincRNA MGP_129S1SvImJ_T0005937.1 MGP_129S1SvImJ_G0004981.1 mouse_genomes_project 1 140535912 140542153 + Gm19705 lincRNA lincRNA MGP_129S1SvImJ_T0005938.1 MGP_129S1SvImJ_G0004981.1 mouse_genomes_project 1 140542814 140551677 + Gm19705 lincRNA lincRNA MGP_129S1SvImJ_T0005939.1 MGP_129S1SvImJ_G0004981.1 mouse_genomes_project 1 140543047 140551675 + Gm19705 lincRNA lincRNA MGP_129S1SvImJ_T0012316.1 MGP_129S1SvImJ_G0010405.1 mouse_genomes_project 1 162656357 162656879 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009488.1 MGP_129S1SvImJ_G0007604.1 mouse_genomes_project 1 32492125 32492198 + Mir6896 miRNA miRNA MGP_129S1SvImJ_T0021079.1 MGP_129S1SvImJ_G0016253.1 mouse_genomes_project 1 88013037 88061983 + Dis3l2 protein_coding processed_transcript MGP_129S1SvImJ_T0021080.1 MGP_129S1SvImJ_G0016253.1 mouse_genomes_project 1 88013048 88383227 + MGP_129S1SvImJ_P0021080 Dis3l2 protein_coding protein_coding MGP_129S1SvImJ_T0021081.1 MGP_129S1SvImJ_G0016253.1 mouse_genomes_project 1 88013057 88206709 + Dis3l2 protein_coding retained_intron MGP_129S1SvImJ_T0021082.1 MGP_129S1SvImJ_G0016253.1 mouse_genomes_project 1 88013057 88382327 + MGP_129S1SvImJ_P0021082 Dis3l2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021083.1 MGP_129S1SvImJ_G0016253.1 mouse_genomes_project 1 88013072 88383224 + MGP_129S1SvImJ_P0021083 Dis3l2 protein_coding protein_coding MGP_129S1SvImJ_T0021084.1 MGP_129S1SvImJ_G0016253.1 mouse_genomes_project 1 88175377 88176112 + Dis3l2 protein_coding retained_intron MGP_129S1SvImJ_T0012333.1 MGP_129S1SvImJ_G0010422.1 mouse_genomes_project 1 170987391 170988971 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012250.1 MGP_129S1SvImJ_G0010339.1 mouse_genomes_project 1 131776421 131776728 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099122.1 MGP_129S1SvImJ_G0037189.1 mouse_genomes_project 1 143764159 143764263 + Gm25619 snRNA snRNA MGP_129S1SvImJ_T0023665.1 MGP_129S1SvImJ_G0016814.1 mouse_genomes_project 1 179710651 179731089 - MGP_129S1SvImJ_P0023665 Ifi204 protein_coding protein_coding MGP_129S1SvImJ_T0023666.1 MGP_129S1SvImJ_G0016814.1 mouse_genomes_project 1 179723805 179731156 - Ifi204 protein_coding retained_intron MGP_129S1SvImJ_T0022141.1 MGP_129S1SvImJ_G0016486.1 mouse_genomes_project 1 136934337 136952500 + MGP_129S1SvImJ_P0022141 Etnk2 protein_coding protein_coding MGP_129S1SvImJ_T0022142.1 MGP_129S1SvImJ_G0016486.1 mouse_genomes_project 1 136934341 136947296 + Etnk2 protein_coding retained_intron MGP_129S1SvImJ_T0022143.1 MGP_129S1SvImJ_G0016486.1 mouse_genomes_project 1 136936087 136952480 + MGP_129S1SvImJ_P0022143 Etnk2 protein_coding protein_coding MGP_129S1SvImJ_T0022144.1 MGP_129S1SvImJ_G0016486.1 mouse_genomes_project 1 136936517 136941373 + Etnk2 protein_coding retained_intron MGP_129S1SvImJ_T0022145.1 MGP_129S1SvImJ_G0016486.1 mouse_genomes_project 1 136939531 136949152 + Etnk2 protein_coding processed_transcript MGP_129S1SvImJ_T0021173.1 MGP_129S1SvImJ_G0016270.1 mouse_genomes_project 1 89176269 89203251 + Sag protein_coding retained_intron MGP_129S1SvImJ_T0021174.1 MGP_129S1SvImJ_G0016270.1 mouse_genomes_project 1 89176269 89217994 + Sag protein_coding retained_intron MGP_129S1SvImJ_T0021175.1 MGP_129S1SvImJ_G0016270.1 mouse_genomes_project 1 89176269 89218480 + Sag protein_coding retained_intron MGP_129S1SvImJ_T0021176.1 MGP_129S1SvImJ_G0016270.1 mouse_genomes_project 1 89176269 89191492 + Sag protein_coding retained_intron MGP_129S1SvImJ_T0021177.1 MGP_129S1SvImJ_G0016270.1 mouse_genomes_project 1 89176269 89232254 + MGP_129S1SvImJ_P0021177 Sag protein_coding protein_coding MGP_129S1SvImJ_T0021178.1 MGP_129S1SvImJ_G0016270.1 mouse_genomes_project 1 89176269 89232389 + MGP_129S1SvImJ_P0021178 Sag protein_coding protein_coding MGP_129S1SvImJ_T0021179.1 MGP_129S1SvImJ_G0016270.1 mouse_genomes_project 1 89185792 89202610 + Sag protein_coding processed_transcript MGP_129S1SvImJ_T0021180.1 MGP_129S1SvImJ_G0016270.1 mouse_genomes_project 1 89199457 89202620 + Sag protein_coding processed_transcript MGP_129S1SvImJ_T0021181.1 MGP_129S1SvImJ_G0016270.1 mouse_genomes_project 1 89204440 89218498 + Sag protein_coding retained_intron MGP_129S1SvImJ_T0100314.1 MGP_129S1SvImJ_G0038381.1 mouse_genomes_project 1 15063478 15063589 + Gm25166 snoRNA snoRNA MGP_129S1SvImJ_T0005722.1 MGP_129S1SvImJ_G0004816.1 mouse_genomes_project 1 41531093 41642854 - Pantr1 lincRNA lincRNA MGP_129S1SvImJ_T0005723.1 MGP_129S1SvImJ_G0004816.1 mouse_genomes_project 1 41593399 41639704 - Pantr1 lincRNA lincRNA MGP_129S1SvImJ_T0005724.1 MGP_129S1SvImJ_G0004816.1 mouse_genomes_project 1 41593405 41612569 - Pantr1 lincRNA lincRNA MGP_129S1SvImJ_T0005725.1 MGP_129S1SvImJ_G0004816.1 mouse_genomes_project 1 41593406 41639729 - Pantr1 lincRNA lincRNA MGP_129S1SvImJ_T0005726.1 MGP_129S1SvImJ_G0004816.1 mouse_genomes_project 1 41593406 41596867 - Pantr1 lincRNA lincRNA MGP_129S1SvImJ_T0005727.1 MGP_129S1SvImJ_G0004816.1 mouse_genomes_project 1 41593406 41642871 - Pantr1 lincRNA lincRNA MGP_129S1SvImJ_T0005728.1 MGP_129S1SvImJ_G0004816.1 mouse_genomes_project 1 41593406 41642871 - Pantr1 lincRNA lincRNA MGP_129S1SvImJ_T0005729.1 MGP_129S1SvImJ_G0004816.1 mouse_genomes_project 1 41593407 41639669 - Pantr1 lincRNA lincRNA MGP_129S1SvImJ_T0005730.1 MGP_129S1SvImJ_G0004816.1 mouse_genomes_project 1 41593407 41613248 - Pantr1 lincRNA lincRNA MGP_129S1SvImJ_T0005731.1 MGP_129S1SvImJ_G0004816.1 mouse_genomes_project 1 41593584 41612490 - Pantr1 lincRNA lincRNA MGP_129S1SvImJ_T0005732.1 MGP_129S1SvImJ_G0004816.1 mouse_genomes_project 1 41612429 41642888 - Pantr1 lincRNA lincRNA MGP_129S1SvImJ_T0005733.1 MGP_129S1SvImJ_G0004816.1 mouse_genomes_project 1 41639602 41642871 - Pantr1 lincRNA lincRNA MGP_129S1SvImJ_T0000752.1 MGP_129S1SvImJ_G0000689.1 mouse_genomes_project 1 170030950 170034047 + TEC TEC MGP_129S1SvImJ_T0022383.1 MGP_129S1SvImJ_G0016538.1 mouse_genomes_project 1 140029063 140049828 - MGP_129S1SvImJ_P0022383 5730559C18Rik protein_coding protein_coding MGP_129S1SvImJ_T0022384.1 MGP_129S1SvImJ_G0016538.1 mouse_genomes_project 1 140035805 140045826 - MGP_129S1SvImJ_P0022384 5730559C18Rik protein_coding protein_coding MGP_129S1SvImJ_T0022385.1 MGP_129S1SvImJ_G0016538.1 mouse_genomes_project 1 140035843 140045847 - MGP_129S1SvImJ_P0022385 5730559C18Rik protein_coding protein_coding MGP_129S1SvImJ_T0022386.1 MGP_129S1SvImJ_G0016538.1 mouse_genomes_project 1 140039091 140043191 - 5730559C18Rik protein_coding retained_intron MGP_129S1SvImJ_T0022387.1 MGP_129S1SvImJ_G0016538.1 mouse_genomes_project 1 140041721 140049683 - MGP_129S1SvImJ_P0022387 5730559C18Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022388.1 MGP_129S1SvImJ_G0016538.1 mouse_genomes_project 1 140041742 140045556 - MGP_129S1SvImJ_P0022388 5730559C18Rik protein_coding protein_coding MGP_129S1SvImJ_T0100330.1 MGP_129S1SvImJ_G0038397.1 mouse_genomes_project 1 44824608 44824739 + Gm23974 snoRNA snoRNA MGP_129S1SvImJ_T0020896.1 MGP_129S1SvImJ_G0016215.1 mouse_genomes_project 1 83225946 83360796 + MGP_129S1SvImJ_P0020896 Rhbdd1 protein_coding protein_coding MGP_129S1SvImJ_T0020897.1 MGP_129S1SvImJ_G0016215.1 mouse_genomes_project 1 83226136 83229225 + Rhbdd1 protein_coding retained_intron MGP_129S1SvImJ_T0020898.1 MGP_129S1SvImJ_G0016215.1 mouse_genomes_project 1 83248533 83360796 + MGP_129S1SvImJ_P0020898 Rhbdd1 protein_coding protein_coding MGP_129S1SvImJ_T0012098.1 MGP_129S1SvImJ_G0010187.1 mouse_genomes_project 1 66282069 66282815 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021836.1 MGP_129S1SvImJ_G0016419.1 mouse_genomes_project 1 130390805 130579061 + Mgat5 protein_coding retained_intron MGP_129S1SvImJ_T0021837.1 MGP_129S1SvImJ_G0016419.1 mouse_genomes_project 1 130390808 130696667 + MGP_129S1SvImJ_P0021837 Mgat5 protein_coding protein_coding MGP_129S1SvImJ_T0021838.1 MGP_129S1SvImJ_G0016419.1 mouse_genomes_project 1 130390818 130588611 + Mgat5 protein_coding retained_intron MGP_129S1SvImJ_T0021839.1 MGP_129S1SvImJ_G0016419.1 mouse_genomes_project 1 130497696 130692042 + MGP_129S1SvImJ_P0021839 Mgat5 protein_coding protein_coding MGP_129S1SvImJ_T0017041.1 MGP_129S1SvImJ_G0015106.1 mouse_genomes_project 1 89418086 89627964 - processed_transcript processed_transcript MGP_129S1SvImJ_T0017042.1 MGP_129S1SvImJ_G0015106.1 mouse_genomes_project 1 89615514 89627934 - processed_transcript processed_transcript MGP_129S1SvImJ_T0020072.1 MGP_129S1SvImJ_G0016065.1 mouse_genomes_project 1 59209496 59307819 + MGP_129S1SvImJ_P0020072 Cdk15 protein_coding protein_coding MGP_129S1SvImJ_T0020073.1 MGP_129S1SvImJ_G0016065.1 mouse_genomes_project 1 59209497 59305146 + MGP_129S1SvImJ_P0020073 Cdk15 protein_coding protein_coding MGP_129S1SvImJ_T0020074.1 MGP_129S1SvImJ_G0016065.1 mouse_genomes_project 1 59209718 59210469 + Cdk15 protein_coding processed_transcript MGP_129S1SvImJ_T0020075.1 MGP_129S1SvImJ_G0016065.1 mouse_genomes_project 1 59254686 59305225 + Cdk15 protein_coding processed_transcript MGP_129S1SvImJ_T0000531.1 MGP_129S1SvImJ_G0000470.1 mouse_genomes_project 1 67079049 67083751 - TEC TEC MGP_129S1SvImJ_T0012024.1 MGP_129S1SvImJ_G0010113.1 mouse_genomes_project 1 46219989 46220286 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102073.1 MGP_129S1SvImJ_G0039908.1 mouse_genomes_project 1 105145566 105240332 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0100395.1 MGP_129S1SvImJ_G0038462.1 mouse_genomes_project 1 168434409 168434543 - Gm22671 snoRNA snoRNA MGP_129S1SvImJ_T0021840.1 MGP_129S1SvImJ_G0016420.1 mouse_genomes_project 1 130694882 130893151 - MGP_129S1SvImJ_P0021840 Tmem163 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021841.1 MGP_129S1SvImJ_G0016420.1 mouse_genomes_project 1 130694894 130893076 - MGP_129S1SvImJ_P0021841 Tmem163 protein_coding protein_coding MGP_129S1SvImJ_T0021842.1 MGP_129S1SvImJ_G0016420.1 mouse_genomes_project 1 130699228 130894973 - MGP_129S1SvImJ_P0021842 Tmem163 protein_coding protein_coding MGP_129S1SvImJ_T0021843.1 MGP_129S1SvImJ_G0016420.1 mouse_genomes_project 1 130699691 130713033 - Tmem163 protein_coding retained_intron MGP_129S1SvImJ_T0021844.1 MGP_129S1SvImJ_G0016420.1 mouse_genomes_project 1 130699875 130751448 - Tmem163 protein_coding processed_transcript MGP_129S1SvImJ_T0099101.1 MGP_129S1SvImJ_G0037168.1 mouse_genomes_project 1 98346752 98346859 + Gm26245 snRNA snRNA MGP_129S1SvImJ_T0011923.1 MGP_129S1SvImJ_G0010012.1 mouse_genomes_project 1 14792793 14793172 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022720.1 MGP_129S1SvImJ_G0016608.1 mouse_genomes_project 1 159278940 159615449 - MGP_129S1SvImJ_P0022720 Cacna1e protein_coding protein_coding MGP_129S1SvImJ_T0022721.1 MGP_129S1SvImJ_G0016608.1 mouse_genomes_project 1 159280728 159615013 - MGP_129S1SvImJ_P0022721 Cacna1e protein_coding protein_coding MGP_129S1SvImJ_T0022722.1 MGP_129S1SvImJ_G0016608.1 mouse_genomes_project 1 159282902 159615012 - MGP_129S1SvImJ_P0022722 Cacna1e protein_coding unknown_likely_coding MGP_129S1SvImJ_T0022723.1 MGP_129S1SvImJ_G0016608.1 mouse_genomes_project 1 159355089 159362690 - Cacna1e protein_coding retained_intron MGP_129S1SvImJ_T0022724.1 MGP_129S1SvImJ_G0016608.1 mouse_genomes_project 1 159367068 159710123 - Cacna1e protein_coding retained_intron MGP_129S1SvImJ_T0022725.1 MGP_129S1SvImJ_G0016608.1 mouse_genomes_project 1 159588251 159778858 - Cacna1e protein_coding retained_intron MGP_129S1SvImJ_T0022726.1 MGP_129S1SvImJ_G0016608.1 mouse_genomes_project 1 159776522 159778381 - Cacna1e protein_coding retained_intron MGP_129S1SvImJ_T0021611.1 MGP_129S1SvImJ_G0016369.1 mouse_genomes_project 1 108131797 108176010 + MGP_129S1SvImJ_P0021611 Zcchc2 protein_coding protein_coding MGP_129S1SvImJ_T0021612.1 MGP_129S1SvImJ_G0016369.1 mouse_genomes_project 1 108132080 108176003 + MGP_129S1SvImJ_P0021612 Zcchc2 protein_coding protein_coding MGP_129S1SvImJ_T0021613.1 MGP_129S1SvImJ_G0016369.1 mouse_genomes_project 1 108146058 108174384 + MGP_129S1SvImJ_P0021613 Zcchc2 protein_coding protein_coding MGP_129S1SvImJ_T0021614.1 MGP_129S1SvImJ_G0016369.1 mouse_genomes_project 1 108146073 108169437 + MGP_129S1SvImJ_P0021614 Zcchc2 protein_coding protein_coding MGP_129S1SvImJ_T0021615.1 MGP_129S1SvImJ_G0016369.1 mouse_genomes_project 1 108153680 108165195 + MGP_129S1SvImJ_P0021615 Zcchc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021729.1 MGP_129S1SvImJ_G0016396.1 mouse_genomes_project 1 122275535 122278359 + MGP_129S1SvImJ_P0021729 Tmem185b protein_coding protein_coding MGP_129S1SvImJ_T0021730.1 MGP_129S1SvImJ_G0016396.1 mouse_genomes_project 1 122275548 122276605 + Tmem185b protein_coding processed_transcript MGP_129S1SvImJ_T0000771.1 MGP_129S1SvImJ_G0000708.1 mouse_genomes_project 1 182308365 182310801 + TEC TEC MGP_129S1SvImJ_T0019555.1 MGP_129S1SvImJ_G0015967.1 mouse_genomes_project 1 39228680 39251090 + MGP_129S1SvImJ_P0019555 Il1rl1 protein_coding protein_coding MGP_129S1SvImJ_T0019556.1 MGP_129S1SvImJ_G0015967.1 mouse_genomes_project 1 39236877 39241696 + MGP_129S1SvImJ_P0019556 Il1rl1 protein_coding protein_coding MGP_129S1SvImJ_T0019557.1 MGP_129S1SvImJ_G0015967.1 mouse_genomes_project 1 39239915 39266455 + MGP_129S1SvImJ_P0019557 Il1rl1 protein_coding protein_coding MGP_129S1SvImJ_T0019558.1 MGP_129S1SvImJ_G0015967.1 mouse_genomes_project 1 39240064 39252515 + MGP_129S1SvImJ_P0019558 Il1rl1 protein_coding protein_coding MGP_129S1SvImJ_T0019559.1 MGP_129S1SvImJ_G0015967.1 mouse_genomes_project 1 39240916 39266437 + MGP_129S1SvImJ_P0019559 Il1rl1 protein_coding protein_coding MGP_129S1SvImJ_T0017067.1 MGP_129S1SvImJ_G0015113.1 mouse_genomes_project 1 139927711 139932667 - Gm15850 processed_transcript processed_transcript MGP_129S1SvImJ_T0017068.1 MGP_129S1SvImJ_G0015113.1 mouse_genomes_project 1 139929252 139932655 - Gm15850 processed_transcript processed_transcript MGP_129S1SvImJ_T0017069.1 MGP_129S1SvImJ_G0015113.1 mouse_genomes_project 1 139929252 139932655 - Gm15850 processed_transcript processed_transcript MGP_129S1SvImJ_T0017070.1 MGP_129S1SvImJ_G0015113.1 mouse_genomes_project 1 139929252 139932655 - Gm15850 processed_transcript processed_transcript MGP_129S1SvImJ_T0023724.1 MGP_129S1SvImJ_G0016841.1 mouse_genomes_project 1 181979414 182011009 + MGP_129S1SvImJ_P0023724 Exo1 protein_coding protein_coding MGP_129S1SvImJ_T0023725.1 MGP_129S1SvImJ_G0016841.1 mouse_genomes_project 1 181979627 181986390 + MGP_129S1SvImJ_P0023725 Exo1 protein_coding protein_coding MGP_129S1SvImJ_T0023726.1 MGP_129S1SvImJ_G0016841.1 mouse_genomes_project 1 181979629 181989228 + MGP_129S1SvImJ_P0023726 Exo1 protein_coding protein_coding MGP_129S1SvImJ_T0023727.1 MGP_129S1SvImJ_G0016841.1 mouse_genomes_project 1 181979644 182006074 + MGP_129S1SvImJ_P0023727 Exo1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0023728.1 MGP_129S1SvImJ_G0016841.1 mouse_genomes_project 1 181979646 181989250 + MGP_129S1SvImJ_P0023728 Exo1 protein_coding protein_coding MGP_129S1SvImJ_T0023729.1 MGP_129S1SvImJ_G0016841.1 mouse_genomes_project 1 181980012 181989246 + MGP_129S1SvImJ_P0023729 Exo1 protein_coding protein_coding MGP_129S1SvImJ_T0023730.1 MGP_129S1SvImJ_G0016841.1 mouse_genomes_project 1 181990047 181998072 + MGP_129S1SvImJ_P0023730 Exo1 protein_coding protein_coding MGP_129S1SvImJ_T0023731.1 MGP_129S1SvImJ_G0016841.1 mouse_genomes_project 1 181998522 182006241 + MGP_129S1SvImJ_P0023731 Exo1 protein_coding protein_coding MGP_129S1SvImJ_T0023732.1 MGP_129S1SvImJ_G0016841.1 mouse_genomes_project 1 182001334 182006058 + Exo1 protein_coding retained_intron MGP_129S1SvImJ_T0023733.1 MGP_129S1SvImJ_G0016841.1 mouse_genomes_project 1 182001472 182003722 + MGP_129S1SvImJ_P0023733 Exo1 protein_coding protein_coding MGP_129S1SvImJ_T0023734.1 MGP_129S1SvImJ_G0016841.1 mouse_genomes_project 1 182005093 182006253 + Exo1 protein_coding processed_transcript MGP_129S1SvImJ_T0011258.1 MGP_129S1SvImJ_G0009374.1 mouse_genomes_project 1 7442306 7442546 + Gm26348 misc_RNA misc_RNA MGP_129S1SvImJ_T0012016.1 MGP_129S1SvImJ_G0010105.1 mouse_genomes_project 1 44574609 44575582 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005672.1 MGP_129S1SvImJ_G0004773.1 mouse_genomes_project 1 9992289 9993142 - Gm29663 lincRNA lincRNA MGP_129S1SvImJ_T0012062.1 MGP_129S1SvImJ_G0010151.1 mouse_genomes_project 1 58522590 58529648 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003001.1 MGP_129S1SvImJ_G0002819.1 mouse_genomes_project 1 196247470 196248936 + A430027H14Rik antisense antisense MGP_129S1SvImJ_T0003002.1 MGP_129S1SvImJ_G0002819.1 mouse_genomes_project 1 196248023 196248912 + A430027H14Rik antisense antisense MGP_129S1SvImJ_T0024250.1 MGP_129S1SvImJ_G0016947.1 mouse_genomes_project 1 198781334 198854172 + MGP_129S1SvImJ_P0024250 Lpgat1 protein_coding protein_coding MGP_129S1SvImJ_T0024251.1 MGP_129S1SvImJ_G0016947.1 mouse_genomes_project 1 198781334 198782898 + MGP_129S1SvImJ_P0024251 Lpgat1 protein_coding protein_coding MGP_129S1SvImJ_T0024252.1 MGP_129S1SvImJ_G0016947.1 mouse_genomes_project 1 198781527 198783286 + Lpgat1 protein_coding retained_intron MGP_129S1SvImJ_T0024253.1 MGP_129S1SvImJ_G0016947.1 mouse_genomes_project 1 198781889 198849459 + MGP_129S1SvImJ_P0024253 Lpgat1 protein_coding protein_coding MGP_129S1SvImJ_T0024254.1 MGP_129S1SvImJ_G0016947.1 mouse_genomes_project 1 198782021 198825439 + MGP_129S1SvImJ_P0024254 Lpgat1 protein_coding protein_coding MGP_129S1SvImJ_T0011934.1 MGP_129S1SvImJ_G0010023.1 mouse_genomes_project 1 18060287 18060840 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000635.1 MGP_129S1SvImJ_G0000574.1 mouse_genomes_project 1 130460360 130465121 + TEC TEC MGP_129S1SvImJ_T0019818.1 MGP_129S1SvImJ_G0016017.1 mouse_genomes_project 1 52840671 52845530 + Ormdl1 protein_coding retained_intron MGP_129S1SvImJ_T0019819.1 MGP_129S1SvImJ_G0016017.1 mouse_genomes_project 1 52840671 52855640 + MGP_129S1SvImJ_P0019819 Ormdl1 protein_coding protein_coding MGP_129S1SvImJ_T0023677.1 MGP_129S1SvImJ_G0016823.1 mouse_genomes_project 1 180120630 180126243 + MGP_129S1SvImJ_P0023677 Olfr429 protein_coding protein_coding MGP_129S1SvImJ_T0023678.1 MGP_129S1SvImJ_G0016823.1 mouse_genomes_project 1 180125300 180126243 + MGP_129S1SvImJ_P0023678 Olfr429 protein_coding protein_coding MGP_129S1SvImJ_T0011973.1 MGP_129S1SvImJ_G0010062.1 mouse_genomes_project 1 31839590 31840008 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006005.1 MGP_129S1SvImJ_G0005033.1 mouse_genomes_project 1 172534287 172538412 - Gm16701 lincRNA lincRNA MGP_129S1SvImJ_T0005951.1 MGP_129S1SvImJ_G0004991.1 mouse_genomes_project 1 152822009 152837288 - Gm29515 lincRNA lincRNA MGP_129S1SvImJ_T0102079.1 MGP_129S1SvImJ_G0039914.1 mouse_genomes_project 1 120389228 120411961 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0021386.1 MGP_129S1SvImJ_G0016323.1 mouse_genomes_project 1 94213383 94214439 + MGP_129S1SvImJ_P0021386 Olfr12 protein_coding protein_coding MGP_129S1SvImJ_T0100376.1 MGP_129S1SvImJ_G0038443.1 mouse_genomes_project 1 144139171 144139313 + Gm26048 snoRNA snoRNA MGP_129S1SvImJ_T0100335.1 MGP_129S1SvImJ_G0038402.1 mouse_genomes_project 1 59018114 59018245 + Gm25502 snoRNA snoRNA MGP_129S1SvImJ_T0021657.1 MGP_129S1SvImJ_G0016385.1 mouse_genomes_project 1 112253380 112268240 + MGP_129S1SvImJ_P0021657 Cdh7 protein_coding protein_coding MGP_129S1SvImJ_T0021658.1 MGP_129S1SvImJ_G0016385.1 mouse_genomes_project 1 112253659 112433704 + MGP_129S1SvImJ_P0021658 Cdh7 protein_coding protein_coding MGP_129S1SvImJ_T0021659.1 MGP_129S1SvImJ_G0016385.1 mouse_genomes_project 1 112253930 112267627 + MGP_129S1SvImJ_P0021659 Cdh7 protein_coding protein_coding MGP_129S1SvImJ_T0021660.1 MGP_129S1SvImJ_G0016385.1 mouse_genomes_project 1 112253955 112266686 + MGP_129S1SvImJ_P0021660 Cdh7 protein_coding protein_coding MGP_129S1SvImJ_T0021661.1 MGP_129S1SvImJ_G0016385.1 mouse_genomes_project 1 112254178 112432756 + MGP_129S1SvImJ_P0021661 Cdh7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021662.1 MGP_129S1SvImJ_G0016385.1 mouse_genomes_project 1 112254230 112270935 + MGP_129S1SvImJ_P0021662 Cdh7 protein_coding protein_coding MGP_129S1SvImJ_T0021663.1 MGP_129S1SvImJ_G0016385.1 mouse_genomes_project 1 112254686 112432562 + MGP_129S1SvImJ_P0021663 Cdh7 protein_coding protein_coding MGP_129S1SvImJ_T0021664.1 MGP_129S1SvImJ_G0016385.1 mouse_genomes_project 1 112266285 112432750 + MGP_129S1SvImJ_P0021664 Cdh7 protein_coding protein_coding MGP_129S1SvImJ_T0021665.1 MGP_129S1SvImJ_G0016385.1 mouse_genomes_project 1 112392767 112431619 + MGP_129S1SvImJ_P0021665 Cdh7 protein_coding protein_coding MGP_129S1SvImJ_T0000400.1 MGP_129S1SvImJ_G0000342.1 mouse_genomes_project 1 8088073 8089996 - TEC TEC MGP_129S1SvImJ_T0002807.1 MGP_129S1SvImJ_G0002668.1 mouse_genomes_project 1 37048040 37058676 + Gm16152 antisense antisense MGP_129S1SvImJ_T0002808.1 MGP_129S1SvImJ_G0002668.1 mouse_genomes_project 1 37051920 37053336 + Gm16152 antisense antisense MGP_129S1SvImJ_T0000428.1 MGP_129S1SvImJ_G0000369.1 mouse_genomes_project 1 21840855 21841245 + TEC TEC MGP_129S1SvImJ_T0000429.1 MGP_129S1SvImJ_G0000369.1 mouse_genomes_project 1 21840857 21841245 + TEC TEC MGP_129S1SvImJ_T0011965.1 MGP_129S1SvImJ_G0010054.1 mouse_genomes_project 1 29521241 29521805 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022550.1 MGP_129S1SvImJ_G0016575.1 mouse_genomes_project 1 155006292 155040587 - MGP_129S1SvImJ_P0022550 BC003331 protein_coding protein_coding MGP_129S1SvImJ_T0022551.1 MGP_129S1SvImJ_G0016575.1 mouse_genomes_project 1 155006292 155040611 - MGP_129S1SvImJ_P0022551 BC003331 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022552.1 MGP_129S1SvImJ_G0016575.1 mouse_genomes_project 1 155020539 155030343 - BC003331 protein_coding retained_intron MGP_129S1SvImJ_T0022553.1 MGP_129S1SvImJ_G0016575.1 mouse_genomes_project 1 155021267 155040805 - BC003331 protein_coding processed_transcript MGP_129S1SvImJ_T0022554.1 MGP_129S1SvImJ_G0016575.1 mouse_genomes_project 1 155032149 155040616 - BC003331 protein_coding retained_intron MGP_129S1SvImJ_T0022555.1 MGP_129S1SvImJ_G0016575.1 mouse_genomes_project 1 155035878 155040615 - BC003331 protein_coding retained_intron MGP_129S1SvImJ_T0022080.1 MGP_129S1SvImJ_G0016474.1 mouse_genomes_project 1 135996761 135999168 + MGP_129S1SvImJ_P0022080 Tmem81 protein_coding protein_coding MGP_129S1SvImJ_T0022081.1 MGP_129S1SvImJ_G0016474.1 mouse_genomes_project 1 135997420 135999168 + MGP_129S1SvImJ_P0022081 Tmem81 protein_coding protein_coding MGP_129S1SvImJ_T0000814.1 MGP_129S1SvImJ_G0000749.1 mouse_genomes_project 1 195946467 195948006 + TEC TEC MGP_129S1SvImJ_T0012369.1 MGP_129S1SvImJ_G0010458.1 mouse_genomes_project 1 187789682 187791529 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012068.1 MGP_129S1SvImJ_G0010157.1 mouse_genomes_project 1 59980799 59982861 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006034.1 MGP_129S1SvImJ_G0005056.1 mouse_genomes_project 1 188910770 188926754 + 1700047M11Rik lincRNA lincRNA MGP_129S1SvImJ_T0006035.1 MGP_129S1SvImJ_G0005056.1 mouse_genomes_project 1 188924262 188926716 + 1700047M11Rik lincRNA lincRNA MGP_129S1SvImJ_T0000420.1 MGP_129S1SvImJ_G0000362.1 mouse_genomes_project 1 14447086 14447913 + TEC TEC MGP_129S1SvImJ_T0000636.1 MGP_129S1SvImJ_G0000575.1 mouse_genomes_project 1 130598129 130598672 + TEC TEC MGP_129S1SvImJ_T0002915.1 MGP_129S1SvImJ_G0002747.1 mouse_genomes_project 1 138546472 138558761 + Gm28892 antisense antisense MGP_129S1SvImJ_T0023872.1 MGP_129S1SvImJ_G0016867.1 mouse_genomes_project 1 186642782 186645844 - Psen2 protein_coding processed_transcript MGP_129S1SvImJ_T0023873.1 MGP_129S1SvImJ_G0016867.1 mouse_genomes_project 1 186642782 186672054 - MGP_129S1SvImJ_P0023873 Psen2 protein_coding protein_coding MGP_129S1SvImJ_T0023874.1 MGP_129S1SvImJ_G0016867.1 mouse_genomes_project 1 186642782 186668780 - MGP_129S1SvImJ_P0023874 Psen2 protein_coding protein_coding MGP_129S1SvImJ_T0023875.1 MGP_129S1SvImJ_G0016867.1 mouse_genomes_project 1 186642784 186645347 - Psen2 protein_coding retained_intron MGP_129S1SvImJ_T0023876.1 MGP_129S1SvImJ_G0016867.1 mouse_genomes_project 1 186642784 186661594 - MGP_129S1SvImJ_P0023876 Psen2 protein_coding protein_coding MGP_129S1SvImJ_T0023877.1 MGP_129S1SvImJ_G0016867.1 mouse_genomes_project 1 186643167 186645841 - Psen2 protein_coding processed_transcript MGP_129S1SvImJ_T0023878.1 MGP_129S1SvImJ_G0016867.1 mouse_genomes_project 1 186643221 186663794 - MGP_129S1SvImJ_P0023878 Psen2 protein_coding protein_coding MGP_129S1SvImJ_T0023879.1 MGP_129S1SvImJ_G0016867.1 mouse_genomes_project 1 186643223 186661401 - MGP_129S1SvImJ_P0023879 Psen2 protein_coding protein_coding MGP_129S1SvImJ_T0023880.1 MGP_129S1SvImJ_G0016867.1 mouse_genomes_project 1 186643246 186645804 - Psen2 protein_coding processed_transcript MGP_129S1SvImJ_T0023881.1 MGP_129S1SvImJ_G0016867.1 mouse_genomes_project 1 186648302 186671998 - Psen2 protein_coding retained_intron MGP_129S1SvImJ_T0023882.1 MGP_129S1SvImJ_G0016867.1 mouse_genomes_project 1 186650952 186654866 - Psen2 protein_coding retained_intron MGP_129S1SvImJ_T0023883.1 MGP_129S1SvImJ_G0016867.1 mouse_genomes_project 1 186661281 186679192 - MGP_129S1SvImJ_P0023883 Psen2 protein_coding protein_coding MGP_129S1SvImJ_T0024208.1 MGP_129S1SvImJ_G0016937.1 mouse_genomes_project 1 198067960 198083536 - MGP_129S1SvImJ_P0024208 Tatdn3 protein_coding protein_coding MGP_129S1SvImJ_T0024209.1 MGP_129S1SvImJ_G0016937.1 mouse_genomes_project 1 198067972 198083508 - MGP_129S1SvImJ_P0024209 Tatdn3 protein_coding protein_coding MGP_129S1SvImJ_T0024210.1 MGP_129S1SvImJ_G0016937.1 mouse_genomes_project 1 198067976 198083508 - MGP_129S1SvImJ_P0024210 Tatdn3 protein_coding protein_coding MGP_129S1SvImJ_T0024211.1 MGP_129S1SvImJ_G0016937.1 mouse_genomes_project 1 198067976 198083509 - MGP_129S1SvImJ_P0024211 Tatdn3 protein_coding protein_coding MGP_129S1SvImJ_T0024212.1 MGP_129S1SvImJ_G0016937.1 mouse_genomes_project 1 198067979 198071775 - Tatdn3 protein_coding retained_intron MGP_129S1SvImJ_T0024213.1 MGP_129S1SvImJ_G0016937.1 mouse_genomes_project 1 198075544 198079434 - Tatdn3 protein_coding retained_intron MGP_129S1SvImJ_T0024214.1 MGP_129S1SvImJ_G0016937.1 mouse_genomes_project 1 198078486 198080029 - Tatdn3 protein_coding retained_intron MGP_129S1SvImJ_T0024215.1 MGP_129S1SvImJ_G0016937.1 mouse_genomes_project 1 198079368 198083508 - Tatdn3 protein_coding retained_intron MGP_129S1SvImJ_T0024216.1 MGP_129S1SvImJ_G0016937.1 mouse_genomes_project 1 198080664 198083508 - Tatdn3 protein_coding retained_intron MGP_129S1SvImJ_T0021392.1 MGP_129S1SvImJ_G0016325.1 mouse_genomes_project 1 94237598 94242222 - MGP_129S1SvImJ_P0021392 Otos protein_coding protein_coding MGP_129S1SvImJ_T0021393.1 MGP_129S1SvImJ_G0016325.1 mouse_genomes_project 1 94237599 94241635 - Otos protein_coding retained_intron MGP_129S1SvImJ_T0000493.1 MGP_129S1SvImJ_G0000432.1 mouse_genomes_project 1 46957702 46958608 + TEC TEC MGP_129S1SvImJ_T0020286.1 MGP_129S1SvImJ_G0016107.1 mouse_genomes_project 1 65304023 65325395 - MGP_129S1SvImJ_P0020286 D630023F18Rik protein_coding protein_coding MGP_129S1SvImJ_T0020287.1 MGP_129S1SvImJ_G0016107.1 mouse_genomes_project 1 65306051 65325374 - MGP_129S1SvImJ_P0020287 D630023F18Rik protein_coding protein_coding MGP_129S1SvImJ_T0020288.1 MGP_129S1SvImJ_G0016107.1 mouse_genomes_project 1 65307454 65325295 - MGP_129S1SvImJ_P0020288 D630023F18Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0000548.1 MGP_129S1SvImJ_G0000487.1 mouse_genomes_project 1 77803881 77807624 - TEC TEC MGP_129S1SvImJ_T0012374.1 MGP_129S1SvImJ_G0010463.1 mouse_genomes_project 1 189924230 189940422 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006075.1 MGP_129S1SvImJ_G0005087.1 mouse_genomes_project 1 198479392 198507676 - Gm32200 lincRNA lincRNA MGP_129S1SvImJ_T0021014.1 MGP_129S1SvImJ_G0016239.1 mouse_genomes_project 1 87246354 87254234 + Spata3 protein_coding processed_transcript MGP_129S1SvImJ_T0021015.1 MGP_129S1SvImJ_G0016239.1 mouse_genomes_project 1 87248243 87258788 + Spata3 protein_coding processed_transcript MGP_129S1SvImJ_T0021016.1 MGP_129S1SvImJ_G0016239.1 mouse_genomes_project 1 87251504 87259498 + MGP_129S1SvImJ_P0021016 Spata3 protein_coding protein_coding MGP_129S1SvImJ_T0021017.1 MGP_129S1SvImJ_G0016239.1 mouse_genomes_project 1 87251505 87254231 + MGP_129S1SvImJ_P0021017 Spata3 protein_coding protein_coding MGP_129S1SvImJ_T0021018.1 MGP_129S1SvImJ_G0016239.1 mouse_genomes_project 1 87251508 87259498 + MGP_129S1SvImJ_P0021018 Spata3 protein_coding protein_coding MGP_129S1SvImJ_T0021019.1 MGP_129S1SvImJ_G0016239.1 mouse_genomes_project 1 87251508 87256738 + MGP_129S1SvImJ_P0021019 Spata3 protein_coding protein_coding MGP_129S1SvImJ_T0021020.1 MGP_129S1SvImJ_G0016239.1 mouse_genomes_project 1 87251508 87254233 + MGP_129S1SvImJ_P0021020 Spata3 protein_coding protein_coding MGP_129S1SvImJ_T0021021.1 MGP_129S1SvImJ_G0016239.1 mouse_genomes_project 1 87251515 87259461 + MGP_129S1SvImJ_P0021021 Spata3 protein_coding protein_coding MGP_129S1SvImJ_T0021022.1 MGP_129S1SvImJ_G0016239.1 mouse_genomes_project 1 87251522 87258802 + MGP_129S1SvImJ_P0021022 Spata3 protein_coding protein_coding MGP_129S1SvImJ_T0021023.1 MGP_129S1SvImJ_G0016239.1 mouse_genomes_project 1 87251523 87254234 + MGP_129S1SvImJ_P0021023 Spata3 protein_coding protein_coding MGP_129S1SvImJ_T0021024.1 MGP_129S1SvImJ_G0016239.1 mouse_genomes_project 1 87251667 87258804 + MGP_129S1SvImJ_P0021024 Spata3 protein_coding protein_coding MGP_129S1SvImJ_T0005990.1 MGP_129S1SvImJ_G0005021.1 mouse_genomes_project 1 170086317 170094714 + lincRNA lincRNA MGP_129S1SvImJ_T0099071.1 MGP_129S1SvImJ_G0037138.1 mouse_genomes_project 1 30888503 30888566 - Gm24732 snRNA snRNA MGP_129S1SvImJ_T0098426.1 MGP_129S1SvImJ_G0036511.1 mouse_genomes_project 1 154354269 154354378 - n-R5s218 rRNA rRNA MGP_129S1SvImJ_T0023501.1 MGP_129S1SvImJ_G0016764.1 mouse_genomes_project 1 177304219 177305491 + MGP_129S1SvImJ_P0023501 Alyref2 protein_coding protein_coding MGP_129S1SvImJ_T0006030.1 MGP_129S1SvImJ_G0005054.1 mouse_genomes_project 1 188366775 188376910 + lincRNA lincRNA MGP_129S1SvImJ_T0006031.1 MGP_129S1SvImJ_G0005054.1 mouse_genomes_project 1 188370749 188376888 + lincRNA lincRNA MGP_129S1SvImJ_T0006032.1 MGP_129S1SvImJ_G0005054.1 mouse_genomes_project 1 188375626 188377943 + lincRNA lincRNA MGP_129S1SvImJ_T0098783.1 MGP_129S1SvImJ_G0036867.1 mouse_genomes_project 1 83660792 83661809 + Gm28941 sense_intronic sense_intronic MGP_129S1SvImJ_T0009546.1 MGP_129S1SvImJ_G0007662.1 mouse_genomes_project 1 139223105 139223186 - Mir1231 miRNA miRNA MGP_129S1SvImJ_T0023537.1 MGP_129S1SvImJ_G0016776.1 mouse_genomes_project 1 177913492 177932087 - MGP_129S1SvImJ_P0023537 Ncstn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023538.1 MGP_129S1SvImJ_G0016776.1 mouse_genomes_project 1 177913492 177932087 - MGP_129S1SvImJ_P0023538 Ncstn protein_coding protein_coding MGP_129S1SvImJ_T0023539.1 MGP_129S1SvImJ_G0016776.1 mouse_genomes_project 1 177913492 177932087 - MGP_129S1SvImJ_P0023539 Ncstn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023540.1 MGP_129S1SvImJ_G0016776.1 mouse_genomes_project 1 177914180 177915545 - Ncstn protein_coding retained_intron MGP_129S1SvImJ_T0023541.1 MGP_129S1SvImJ_G0016776.1 mouse_genomes_project 1 177915350 177918746 - Ncstn protein_coding retained_intron MGP_129S1SvImJ_T0023542.1 MGP_129S1SvImJ_G0016776.1 mouse_genomes_project 1 177929827 177932087 - Ncstn protein_coding retained_intron MGP_129S1SvImJ_T0012035.1 MGP_129S1SvImJ_G0010124.1 mouse_genomes_project 1 48910481 48910921 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006022.1 MGP_129S1SvImJ_G0005048.1 mouse_genomes_project 1 186942946 186953632 - Gm37267 lincRNA lincRNA MGP_129S1SvImJ_T0018813.1 MGP_129S1SvImJ_G0015821.1 mouse_genomes_project 1 4330149 4419752 + MGP_129S1SvImJ_P0018813 Pcmtd1 protein_coding protein_coding MGP_129S1SvImJ_T0018814.1 MGP_129S1SvImJ_G0015821.1 mouse_genomes_project 1 4330302 4407053 + Pcmtd1 protein_coding processed_transcript MGP_129S1SvImJ_T0018815.1 MGP_129S1SvImJ_G0015821.1 mouse_genomes_project 1 4330364 4418244 + Pcmtd1 protein_coding processed_transcript MGP_129S1SvImJ_T0018816.1 MGP_129S1SvImJ_G0015821.1 mouse_genomes_project 1 4393783 4416198 + MGP_129S1SvImJ_P0018816 Pcmtd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018817.1 MGP_129S1SvImJ_G0015821.1 mouse_genomes_project 1 4401017 4409522 + Pcmtd1 protein_coding retained_intron MGP_129S1SvImJ_T0018818.1 MGP_129S1SvImJ_G0015821.1 mouse_genomes_project 1 4406235 4418740 + Pcmtd1 protein_coding retained_intron MGP_129S1SvImJ_T0018819.1 MGP_129S1SvImJ_G0015821.1 mouse_genomes_project 1 4406707 4418781 + Pcmtd1 protein_coding retained_intron MGP_129S1SvImJ_T0012135.1 MGP_129S1SvImJ_G0010224.1 mouse_genomes_project 1 84027113 84027485 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012160.1 MGP_129S1SvImJ_G0010249.1 mouse_genomes_project 1 96952087 96952935 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022291.1 MGP_129S1SvImJ_G0016521.1 mouse_genomes_project 1 139052688 139073480 - MGP_129S1SvImJ_P0022291 Timm17a protein_coding protein_coding MGP_129S1SvImJ_T0022292.1 MGP_129S1SvImJ_G0016521.1 mouse_genomes_project 1 139059195 139068429 - Timm17a protein_coding retained_intron MGP_129S1SvImJ_T0022293.1 MGP_129S1SvImJ_G0016521.1 mouse_genomes_project 1 139061961 139073393 - MGP_129S1SvImJ_P0022293 Timm17a protein_coding protein_coding MGP_129S1SvImJ_T0022294.1 MGP_129S1SvImJ_G0016521.1 mouse_genomes_project 1 139067714 139069702 - MGP_129S1SvImJ_P0022294 Timm17a protein_coding protein_coding MGP_129S1SvImJ_T0012061.1 MGP_129S1SvImJ_G0010150.1 mouse_genomes_project 1 58515737 58516089 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002972.1 MGP_129S1SvImJ_G0002793.1 mouse_genomes_project 1 177736387 177749304 - Gm37065 antisense antisense MGP_129S1SvImJ_T0023232.1 MGP_129S1SvImJ_G0016701.1 mouse_genomes_project 1 171652186 171694178 + MGP_129S1SvImJ_P0023232 Gpa33 protein_coding protein_coding MGP_129S1SvImJ_T0023233.1 MGP_129S1SvImJ_G0016701.1 mouse_genomes_project 1 171652288 171685192 + MGP_129S1SvImJ_P0023233 Gpa33 protein_coding protein_coding MGP_129S1SvImJ_T0023234.1 MGP_129S1SvImJ_G0016701.1 mouse_genomes_project 1 171652365 171681799 + Gpa33 protein_coding processed_transcript MGP_129S1SvImJ_T0023235.1 MGP_129S1SvImJ_G0016701.1 mouse_genomes_project 1 171652415 171694177 + MGP_129S1SvImJ_P0023235 Gpa33 protein_coding protein_coding MGP_129S1SvImJ_T0022833.1 MGP_129S1SvImJ_G0016627.1 mouse_genomes_project 1 161649486 161692999 - MGP_129S1SvImJ_P0022833 Fam20b protein_coding protein_coding MGP_129S1SvImJ_T0022834.1 MGP_129S1SvImJ_G0016627.1 mouse_genomes_project 1 161649525 161693013 - MGP_129S1SvImJ_P0022834 Fam20b protein_coding protein_coding MGP_129S1SvImJ_T0022835.1 MGP_129S1SvImJ_G0016627.1 mouse_genomes_project 1 161657984 161672072 - Fam20b protein_coding retained_intron MGP_129S1SvImJ_T0022836.1 MGP_129S1SvImJ_G0016627.1 mouse_genomes_project 1 161671917 161676976 - Fam20b protein_coding processed_transcript MGP_129S1SvImJ_T0022837.1 MGP_129S1SvImJ_G0016627.1 mouse_genomes_project 1 161674826 161690887 - Fam20b protein_coding retained_intron MGP_129S1SvImJ_T0011903.1 MGP_129S1SvImJ_G0009992.1 mouse_genomes_project 1 6757493 6759094 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023664.1 MGP_129S1SvImJ_G0016813.1 mouse_genomes_project 1 179683662 179703527 - MGP_129S1SvImJ_P0023664 AI607873 protein_coding protein_coding MGP_129S1SvImJ_T0000574.1 MGP_129S1SvImJ_G0000513.1 mouse_genomes_project 1 87937603 87941072 + TEC TEC MGP_129S1SvImJ_T0021795.1 MGP_129S1SvImJ_G0016412.1 mouse_genomes_project 1 124394759 124408598 - MGP_129S1SvImJ_P0021795 Ddx18 protein_coding protein_coding MGP_129S1SvImJ_T0021796.1 MGP_129S1SvImJ_G0016412.1 mouse_genomes_project 1 124395905 124399956 - Ddx18 protein_coding retained_intron MGP_129S1SvImJ_T0021797.1 MGP_129S1SvImJ_G0016412.1 mouse_genomes_project 1 124398145 124401002 - MGP_129S1SvImJ_P0021797 Ddx18 protein_coding protein_coding MGP_129S1SvImJ_T0021798.1 MGP_129S1SvImJ_G0016412.1 mouse_genomes_project 1 124405315 124408445 - Ddx18 protein_coding processed_transcript MGP_129S1SvImJ_T0012133.1 MGP_129S1SvImJ_G0010222.1 mouse_genomes_project 1 83957966 83959392 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002921.1 MGP_129S1SvImJ_G0002753.1 mouse_genomes_project 1 140031602 140040600 + Gm26568 antisense antisense MGP_129S1SvImJ_T0006053.1 MGP_129S1SvImJ_G0005068.1 mouse_genomes_project 1 191415539 191421565 + lincRNA lincRNA MGP_129S1SvImJ_T0023515.1 MGP_129S1SvImJ_G0016769.1 mouse_genomes_project 1 177516960 177540630 + MGP_129S1SvImJ_P0023515 Cd48 protein_coding protein_coding MGP_129S1SvImJ_T0023516.1 MGP_129S1SvImJ_G0016769.1 mouse_genomes_project 1 177516961 177540628 + MGP_129S1SvImJ_P0023516 Cd48 protein_coding protein_coding MGP_129S1SvImJ_T0019991.1 MGP_129S1SvImJ_G0016052.1 mouse_genomes_project 1 58312828 58332193 + MGP_129S1SvImJ_P0019991 Nif3l1 protein_coding protein_coding MGP_129S1SvImJ_T0019992.1 MGP_129S1SvImJ_G0016052.1 mouse_genomes_project 1 58312944 58353475 + MGP_129S1SvImJ_P0019992 Nif3l1 protein_coding protein_coding MGP_129S1SvImJ_T0019993.1 MGP_129S1SvImJ_G0016052.1 mouse_genomes_project 1 58313305 58318185 + MGP_129S1SvImJ_P0019993 Nif3l1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019994.1 MGP_129S1SvImJ_G0016052.1 mouse_genomes_project 1 58313406 58315728 + MGP_129S1SvImJ_P0019994 Nif3l1 protein_coding protein_coding MGP_129S1SvImJ_T0019995.1 MGP_129S1SvImJ_G0016052.1 mouse_genomes_project 1 58315308 58331003 + MGP_129S1SvImJ_P0019995 Nif3l1 protein_coding protein_coding MGP_129S1SvImJ_T0019996.1 MGP_129S1SvImJ_G0016052.1 mouse_genomes_project 1 58316844 58326537 + Nif3l1 protein_coding retained_intron MGP_129S1SvImJ_T0019997.1 MGP_129S1SvImJ_G0016052.1 mouse_genomes_project 1 58320830 58324717 + Nif3l1 protein_coding retained_intron MGP_129S1SvImJ_T0019998.1 MGP_129S1SvImJ_G0016052.1 mouse_genomes_project 1 58326421 58330121 + Nif3l1 protein_coding retained_intron MGP_129S1SvImJ_T0000540.1 MGP_129S1SvImJ_G0000479.1 mouse_genomes_project 1 70976779 70982654 - TEC TEC MGP_129S1SvImJ_T0005864.1 MGP_129S1SvImJ_G0004922.1 mouse_genomes_project 1 96468841 96474211 + 4930440C22Rik lincRNA lincRNA MGP_129S1SvImJ_T0005865.1 MGP_129S1SvImJ_G0004922.1 mouse_genomes_project 1 96469200 96474231 + 4930440C22Rik lincRNA lincRNA MGP_129S1SvImJ_T0024197.1 MGP_129S1SvImJ_G0016934.1 mouse_genomes_project 1 197958075 197994499 - MGP_129S1SvImJ_P0024197 Vash2 protein_coding protein_coding MGP_129S1SvImJ_T0024198.1 MGP_129S1SvImJ_G0016934.1 mouse_genomes_project 1 197958077 197994205 - MGP_129S1SvImJ_P0024198 Vash2 protein_coding protein_coding MGP_129S1SvImJ_T0024199.1 MGP_129S1SvImJ_G0016934.1 mouse_genomes_project 1 197988104 197994417 - Vash2 protein_coding processed_transcript MGP_129S1SvImJ_T0099142.1 MGP_129S1SvImJ_G0037209.1 mouse_genomes_project 1 182847858 182847966 + Gm26104 snRNA snRNA MGP_129S1SvImJ_T0012278.1 MGP_129S1SvImJ_G0010367.1 mouse_genomes_project 1 146762146 146762761 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011996.1 MGP_129S1SvImJ_G0010085.1 mouse_genomes_project 1 38047137 38047692 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012114.1 MGP_129S1SvImJ_G0010203.1 mouse_genomes_project 1 72966105 72966634 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009481.1 MGP_129S1SvImJ_G0007597.1 mouse_genomes_project 1 18300309 18300428 + Mir133b miRNA miRNA MGP_129S1SvImJ_T0023086.1 MGP_129S1SvImJ_G0016669.1 mouse_genomes_project 1 168396042 168469060 - MGP_129S1SvImJ_P0023086 Mroh9 protein_coding protein_coding MGP_129S1SvImJ_T0021535.1 MGP_129S1SvImJ_G0016354.1 mouse_genomes_project 1 97011509 97033166 + MGP_129S1SvImJ_P0021535 Fam174a protein_coding protein_coding MGP_129S1SvImJ_T0021536.1 MGP_129S1SvImJ_G0016354.1 mouse_genomes_project 1 97011514 97025832 + MGP_129S1SvImJ_P0021536 Fam174a protein_coding protein_coding MGP_129S1SvImJ_T0102091.1 MGP_129S1SvImJ_G0039926.1 mouse_genomes_project 1 178962874 178963733 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0022100.1 MGP_129S1SvImJ_G0016478.1 mouse_genomes_project 1 136465553 136535075 - MGP_129S1SvImJ_P0022100 Mdm4 protein_coding protein_coding MGP_129S1SvImJ_T0022101.1 MGP_129S1SvImJ_G0016478.1 mouse_genomes_project 1 136467723 136479776 - Mdm4 protein_coding processed_transcript MGP_129S1SvImJ_T0022102.1 MGP_129S1SvImJ_G0016478.1 mouse_genomes_project 1 136493161 136535153 - MGP_129S1SvImJ_P0022102 Mdm4 protein_coding protein_coding MGP_129S1SvImJ_T0022103.1 MGP_129S1SvImJ_G0016478.1 mouse_genomes_project 1 136497575 136535085 - MGP_129S1SvImJ_P0022103 Mdm4 protein_coding protein_coding MGP_129S1SvImJ_T0022104.1 MGP_129S1SvImJ_G0016478.1 mouse_genomes_project 1 136498132 136535094 - MGP_129S1SvImJ_P0022104 Mdm4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022105.1 MGP_129S1SvImJ_G0016478.1 mouse_genomes_project 1 136500131 136535091 - MGP_129S1SvImJ_P0022105 Mdm4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022106.1 MGP_129S1SvImJ_G0016478.1 mouse_genomes_project 1 136500560 136513831 - MGP_129S1SvImJ_P0022106 Mdm4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0022107.1 MGP_129S1SvImJ_G0016478.1 mouse_genomes_project 1 136501247 136535093 - MGP_129S1SvImJ_P0022107 Mdm4 protein_coding protein_coding MGP_129S1SvImJ_T0022108.1 MGP_129S1SvImJ_G0016478.1 mouse_genomes_project 1 136506534 136528718 - Mdm4 protein_coding processed_transcript MGP_129S1SvImJ_T0022109.1 MGP_129S1SvImJ_G0016478.1 mouse_genomes_project 1 136506537 136514200 - Mdm4 protein_coding retained_intron MGP_129S1SvImJ_T0022110.1 MGP_129S1SvImJ_G0016478.1 mouse_genomes_project 1 136509372 136511322 - Mdm4 protein_coding retained_intron MGP_129S1SvImJ_T0022111.1 MGP_129S1SvImJ_G0016478.1 mouse_genomes_project 1 136511070 136514003 - Mdm4 protein_coding retained_intron MGP_129S1SvImJ_T0022112.1 MGP_129S1SvImJ_G0016478.1 mouse_genomes_project 1 136518983 136535067 - Mdm4 protein_coding retained_intron MGP_129S1SvImJ_T0022113.1 MGP_129S1SvImJ_G0016478.1 mouse_genomes_project 1 136519037 136540845 - MGP_129S1SvImJ_P0022113 Mdm4 protein_coding protein_coding MGP_129S1SvImJ_T0022114.1 MGP_129S1SvImJ_G0016478.1 mouse_genomes_project 1 136527560 136535075 - Mdm4 protein_coding retained_intron MGP_129S1SvImJ_T0023126.1 MGP_129S1SvImJ_G0016681.1 mouse_genomes_project 1 169685100 169701441 + MGP_129S1SvImJ_P0023126 Slc19a2 protein_coding protein_coding MGP_129S1SvImJ_T0023127.1 MGP_129S1SvImJ_G0016681.1 mouse_genomes_project 1 169685109 169701425 + MGP_129S1SvImJ_P0023127 Slc19a2 protein_coding protein_coding MGP_129S1SvImJ_T0023128.1 MGP_129S1SvImJ_G0016681.1 mouse_genomes_project 1 169685307 169699574 + MGP_129S1SvImJ_P0023128 Slc19a2 protein_coding protein_coding MGP_129S1SvImJ_T0023129.1 MGP_129S1SvImJ_G0016681.1 mouse_genomes_project 1 169698408 169699507 + Slc19a2 protein_coding retained_intron MGP_129S1SvImJ_T0023255.1 MGP_129S1SvImJ_G0016706.1 mouse_genomes_project 1 172002909 172019411 - MGP_129S1SvImJ_P0023255 Gm4846 protein_coding protein_coding MGP_129S1SvImJ_T0019552.1 MGP_129S1SvImJ_G0015966.1 mouse_genomes_project 1 39110879 39115706 + protein_coding retained_intron MGP_129S1SvImJ_T0019553.1 MGP_129S1SvImJ_G0015966.1 mouse_genomes_project 1 39111880 39115436 + MGP_129S1SvImJ_P0019553 protein_coding protein_coding MGP_129S1SvImJ_T0019554.1 MGP_129S1SvImJ_G0015966.1 mouse_genomes_project 1 39112288 39154880 + MGP_129S1SvImJ_P0019554 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0017118.1 MGP_129S1SvImJ_G0015127.1 mouse_genomes_project 1 183637678 183641481 + processed_transcript processed_transcript MGP_129S1SvImJ_T0017119.1 MGP_129S1SvImJ_G0015127.1 mouse_genomes_project 1 183640459 183641482 + processed_transcript processed_transcript MGP_129S1SvImJ_T0000589.1 MGP_129S1SvImJ_G0000528.1 mouse_genomes_project 1 92369202 92371063 - TEC TEC MGP_129S1SvImJ_T0000545.1 MGP_129S1SvImJ_G0000484.1 mouse_genomes_project 1 75104820 75107799 - TEC TEC MGP_129S1SvImJ_T0102106.1 MGP_129S1SvImJ_G0039941.1 mouse_genomes_project 1 187460267 187460399 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0023570.1 MGP_129S1SvImJ_G0016780.1 mouse_genomes_project 1 178054538 178064562 - MGP_129S1SvImJ_P0023570 Pea15a protein_coding protein_coding MGP_129S1SvImJ_T0023571.1 MGP_129S1SvImJ_G0016780.1 mouse_genomes_project 1 178054538 178064562 - MGP_129S1SvImJ_P0023571 Pea15a protein_coding protein_coding MGP_129S1SvImJ_T0023572.1 MGP_129S1SvImJ_G0016780.1 mouse_genomes_project 1 178056223 178057623 - Pea15a protein_coding processed_transcript MGP_129S1SvImJ_T0023573.1 MGP_129S1SvImJ_G0016780.1 mouse_genomes_project 1 178056968 178064455 - MGP_129S1SvImJ_P0023573 Pea15a protein_coding protein_coding MGP_129S1SvImJ_T0023574.1 MGP_129S1SvImJ_G0016780.1 mouse_genomes_project 1 178057582 178064562 - Pea15a protein_coding retained_intron MGP_129S1SvImJ_T0023082.1 MGP_129S1SvImJ_G0016667.1 mouse_genomes_project 1 168293526 168316018 - MGP_129S1SvImJ_P0023082 Fmo6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023083.1 MGP_129S1SvImJ_G0016667.1 mouse_genomes_project 1 168293698 168315721 - MGP_129S1SvImJ_P0023083 Fmo6 protein_coding protein_coding MGP_129S1SvImJ_T0019284.1 MGP_129S1SvImJ_G0015918.1 mouse_genomes_project 1 34642931 34750771 - MGP_129S1SvImJ_P0019284 Uggt1 protein_coding protein_coding MGP_129S1SvImJ_T0019285.1 MGP_129S1SvImJ_G0015918.1 mouse_genomes_project 1 34646386 34668714 - Uggt1 protein_coding retained_intron MGP_129S1SvImJ_T0019286.1 MGP_129S1SvImJ_G0015918.1 mouse_genomes_project 1 34646390 34750627 - MGP_129S1SvImJ_P0019286 Uggt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019287.1 MGP_129S1SvImJ_G0015918.1 mouse_genomes_project 1 34649059 34653427 - Uggt1 protein_coding retained_intron MGP_129S1SvImJ_T0019288.1 MGP_129S1SvImJ_G0015918.1 mouse_genomes_project 1 34664649 34677182 - MGP_129S1SvImJ_P0019288 Uggt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019289.1 MGP_129S1SvImJ_G0015918.1 mouse_genomes_project 1 34665128 34686090 - MGP_129S1SvImJ_P0019289 Uggt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019290.1 MGP_129S1SvImJ_G0015918.1 mouse_genomes_project 1 34666281 34667862 - Uggt1 protein_coding retained_intron MGP_129S1SvImJ_T0019291.1 MGP_129S1SvImJ_G0015918.1 mouse_genomes_project 1 34682303 34750573 - Uggt1 protein_coding retained_intron MGP_129S1SvImJ_T0019292.1 MGP_129S1SvImJ_G0015918.1 mouse_genomes_project 1 34689342 34714225 - MGP_129S1SvImJ_P0019292 Uggt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019293.1 MGP_129S1SvImJ_G0015918.1 mouse_genomes_project 1 34699430 34712399 - Uggt1 protein_coding retained_intron MGP_129S1SvImJ_T0019294.1 MGP_129S1SvImJ_G0015918.1 mouse_genomes_project 1 34750104 34751186 - Uggt1 protein_coding retained_intron MGP_129S1SvImJ_T0012046.1 MGP_129S1SvImJ_G0010135.1 mouse_genomes_project 1 52278178 52278589 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005815.1 MGP_129S1SvImJ_G0004879.1 mouse_genomes_project 1 77102302 77114605 + Gm17751 lincRNA lincRNA MGP_129S1SvImJ_T0005816.1 MGP_129S1SvImJ_G0004879.1 mouse_genomes_project 1 77102302 77115189 + Gm17751 lincRNA lincRNA MGP_129S1SvImJ_T0023040.1 MGP_129S1SvImJ_G0016660.1 mouse_genomes_project 1 167906784 167935575 + MGP_129S1SvImJ_P0023040 Vamp4 protein_coding protein_coding MGP_129S1SvImJ_T0023041.1 MGP_129S1SvImJ_G0016660.1 mouse_genomes_project 1 167906896 167918283 + Vamp4 protein_coding retained_intron MGP_129S1SvImJ_T0023042.1 MGP_129S1SvImJ_G0016660.1 mouse_genomes_project 1 167906901 167935574 + MGP_129S1SvImJ_P0023042 Vamp4 protein_coding protein_coding MGP_129S1SvImJ_T0023043.1 MGP_129S1SvImJ_G0016660.1 mouse_genomes_project 1 167907097 167935569 + MGP_129S1SvImJ_P0023043 Vamp4 protein_coding protein_coding MGP_129S1SvImJ_T0023044.1 MGP_129S1SvImJ_G0016660.1 mouse_genomes_project 1 167911090 167930855 + Vamp4 protein_coding processed_transcript MGP_129S1SvImJ_T0021934.1 MGP_129S1SvImJ_G0016440.1 mouse_genomes_project 1 134127829 134143240 + MGP_129S1SvImJ_P0021934 AA986860 protein_coding protein_coding MGP_129S1SvImJ_T0021935.1 MGP_129S1SvImJ_G0016440.1 mouse_genomes_project 1 134127963 134141081 + AA986860 protein_coding processed_transcript MGP_129S1SvImJ_T0021936.1 MGP_129S1SvImJ_G0016440.1 mouse_genomes_project 1 134138889 134143239 + AA986860 protein_coding retained_intron MGP_129S1SvImJ_T0020233.1 MGP_129S1SvImJ_G0016091.1 mouse_genomes_project 1 63869714 63901238 - MGP_129S1SvImJ_P0020233 Mdh1b protein_coding protein_coding MGP_129S1SvImJ_T0024102.1 MGP_129S1SvImJ_G0016919.1 mouse_genomes_project 1 193412501 193500868 - MGP_129S1SvImJ_P0024102 Tgfb2 protein_coding protein_coding MGP_129S1SvImJ_T0024103.1 MGP_129S1SvImJ_G0016919.1 mouse_genomes_project 1 193413928 193500579 - MGP_129S1SvImJ_P0024103 Tgfb2 protein_coding protein_coding MGP_129S1SvImJ_T0024104.1 MGP_129S1SvImJ_G0016919.1 mouse_genomes_project 1 193415289 193441516 - Tgfb2 protein_coding retained_intron MGP_129S1SvImJ_T0024105.1 MGP_129S1SvImJ_G0016919.1 mouse_genomes_project 1 193418818 193441582 - Tgfb2 protein_coding retained_intron MGP_129S1SvImJ_T0024106.1 MGP_129S1SvImJ_G0016919.1 mouse_genomes_project 1 193422700 193460579 - Tgfb2 protein_coding processed_transcript MGP_129S1SvImJ_T0024107.1 MGP_129S1SvImJ_G0016919.1 mouse_genomes_project 1 193484503 193499212 - Tgfb2 protein_coding processed_transcript MGP_129S1SvImJ_T0012164.1 MGP_129S1SvImJ_G0010253.1 mouse_genomes_project 1 100048960 100049248 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023649.1 MGP_129S1SvImJ_G0016808.1 mouse_genomes_project 1 179263769 179298166 - MGP_129S1SvImJ_P0023649 Cadm3 protein_coding protein_coding MGP_129S1SvImJ_T0023650.1 MGP_129S1SvImJ_G0016808.1 mouse_genomes_project 1 179266521 179298156 - MGP_129S1SvImJ_P0023650 Cadm3 protein_coding protein_coding MGP_129S1SvImJ_T0023651.1 MGP_129S1SvImJ_G0016808.1 mouse_genomes_project 1 179267373 179272456 - Cadm3 protein_coding retained_intron MGP_129S1SvImJ_T0023652.1 MGP_129S1SvImJ_G0016808.1 mouse_genomes_project 1 179272988 179298119 - Cadm3 protein_coding retained_intron MGP_129S1SvImJ_T0023653.1 MGP_129S1SvImJ_G0016808.1 mouse_genomes_project 1 179275384 179298104 - Cadm3 protein_coding retained_intron MGP_129S1SvImJ_T0000561.1 MGP_129S1SvImJ_G0000500.1 mouse_genomes_project 1 83012707 83014511 + TEC TEC MGP_129S1SvImJ_T0005681.1 MGP_129S1SvImJ_G0004782.1 mouse_genomes_project 1 18517297 18519136 - 6720483E21Rik lincRNA lincRNA MGP_129S1SvImJ_T0023151.1 MGP_129S1SvImJ_G0016687.1 mouse_genomes_project 1 170379770 170383654 - MGP_129S1SvImJ_P0023151 Xcl1 protein_coding protein_coding MGP_129S1SvImJ_T0023907.1 MGP_129S1SvImJ_G0016874.1 mouse_genomes_project 1 187260175 187275566 - MGP_129S1SvImJ_P0023907 H3f3a protein_coding protein_coding MGP_129S1SvImJ_T0023908.1 MGP_129S1SvImJ_G0016874.1 mouse_genomes_project 1 187263620 187275468 - MGP_129S1SvImJ_P0023908 H3f3a protein_coding protein_coding MGP_129S1SvImJ_T0023909.1 MGP_129S1SvImJ_G0016874.1 mouse_genomes_project 1 187263620 187275877 - MGP_129S1SvImJ_P0023909 H3f3a protein_coding protein_coding MGP_129S1SvImJ_T0023910.1 MGP_129S1SvImJ_G0016874.1 mouse_genomes_project 1 187270226 187275537 - H3f3a protein_coding retained_intron MGP_129S1SvImJ_T0023911.1 MGP_129S1SvImJ_G0016874.1 mouse_genomes_project 1 187272166 187275537 - MGP_129S1SvImJ_P0023911 H3f3a protein_coding protein_coding MGP_129S1SvImJ_T0023912.1 MGP_129S1SvImJ_G0016874.1 mouse_genomes_project 1 187272174 187275537 - MGP_129S1SvImJ_P0023912 H3f3a protein_coding protein_coding MGP_129S1SvImJ_T0000820.1 MGP_129S1SvImJ_G0000755.1 mouse_genomes_project 1 199170070 199170203 + TEC TEC MGP_129S1SvImJ_T0000798.1 MGP_129S1SvImJ_G0000734.1 mouse_genomes_project 1 189035058 189035816 - TEC TEC MGP_129S1SvImJ_T0000799.1 MGP_129S1SvImJ_G0000734.1 mouse_genomes_project 1 189035413 189035815 - TEC TEC MGP_129S1SvImJ_T0012045.1 MGP_129S1SvImJ_G0010134.1 mouse_genomes_project 1 52034663 52035126 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005747.1 MGP_129S1SvImJ_G0004829.1 mouse_genomes_project 1 51002850 51008083 - Gm17767 lincRNA lincRNA MGP_129S1SvImJ_T0005748.1 MGP_129S1SvImJ_G0004829.1 mouse_genomes_project 1 51005258 51092939 - Gm17767 lincRNA lincRNA MGP_129S1SvImJ_T0023015.1 MGP_129S1SvImJ_G0016657.1 mouse_genomes_project 1 167276094 167280345 + MGP_129S1SvImJ_P0023015 Pigc protein_coding protein_coding MGP_129S1SvImJ_T0023016.1 MGP_129S1SvImJ_G0016657.1 mouse_genomes_project 1 167276096 167279240 + MGP_129S1SvImJ_P0023016 Pigc protein_coding protein_coding MGP_129S1SvImJ_T0023017.1 MGP_129S1SvImJ_G0016657.1 mouse_genomes_project 1 167276136 167280344 + MGP_129S1SvImJ_P0023017 Pigc protein_coding protein_coding MGP_129S1SvImJ_T0023018.1 MGP_129S1SvImJ_G0016657.1 mouse_genomes_project 1 167276207 167277782 + MGP_129S1SvImJ_P0023018 Pigc protein_coding protein_coding MGP_129S1SvImJ_T0023019.1 MGP_129S1SvImJ_G0016657.1 mouse_genomes_project 1 167276210 167277441 + MGP_129S1SvImJ_P0023019 Pigc protein_coding protein_coding MGP_129S1SvImJ_T0000472.1 MGP_129S1SvImJ_G0000411.1 mouse_genomes_project 1 35440141 35440284 - TEC TEC MGP_129S1SvImJ_T0021113.1 MGP_129S1SvImJ_G0016262.1 mouse_genomes_project 1 88606496 88660458 + MGP_129S1SvImJ_P0021113 Efhd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021114.1 MGP_129S1SvImJ_G0016262.1 mouse_genomes_project 1 88606496 88660461 + MGP_129S1SvImJ_P0021114 Efhd1 protein_coding protein_coding MGP_129S1SvImJ_T0021115.1 MGP_129S1SvImJ_G0016262.1 mouse_genomes_project 1 88658847 88659364 + Efhd1 protein_coding processed_transcript MGP_129S1SvImJ_T0020531.1 MGP_129S1SvImJ_G0016153.1 mouse_genomes_project 1 75111726 75136676 + MGP_129S1SvImJ_P0020531 Cnot9 protein_coding protein_coding MGP_129S1SvImJ_T0020532.1 MGP_129S1SvImJ_G0016153.1 mouse_genomes_project 1 75111728 75132923 + Cnot9 protein_coding processed_transcript MGP_129S1SvImJ_T0020533.1 MGP_129S1SvImJ_G0016153.1 mouse_genomes_project 1 75129362 75134012 + Cnot9 protein_coding retained_intron MGP_129S1SvImJ_T0021544.1 MGP_129S1SvImJ_G0016358.1 mouse_genomes_project 1 99416505 99434677 - MGP_129S1SvImJ_P0021544 D1Ertd622e protein_coding protein_coding MGP_129S1SvImJ_T0021545.1 MGP_129S1SvImJ_G0016358.1 mouse_genomes_project 1 99416505 99434279 - MGP_129S1SvImJ_P0021545 D1Ertd622e protein_coding protein_coding MGP_129S1SvImJ_T0021546.1 MGP_129S1SvImJ_G0016358.1 mouse_genomes_project 1 99418602 99434279 - MGP_129S1SvImJ_P0021546 D1Ertd622e protein_coding protein_coding MGP_129S1SvImJ_T0023575.1 MGP_129S1SvImJ_G0016781.1 mouse_genomes_project 1 178067677 178077624 - MGP_129S1SvImJ_P0023575 Casq1 protein_coding protein_coding MGP_129S1SvImJ_T0023576.1 MGP_129S1SvImJ_G0016781.1 mouse_genomes_project 1 178067678 178071738 - Casq1 protein_coding retained_intron MGP_129S1SvImJ_T0023577.1 MGP_129S1SvImJ_G0016781.1 mouse_genomes_project 1 178072923 178077471 - MGP_129S1SvImJ_P0023577 Casq1 protein_coding protein_coding MGP_129S1SvImJ_T0021062.1 MGP_129S1SvImJ_G0016248.1 mouse_genomes_project 1 87689513 87691147 + MGP_129S1SvImJ_P0021062 1700019O17Rik protein_coding protein_coding MGP_129S1SvImJ_T0023904.1 MGP_129S1SvImJ_G0016872.1 mouse_genomes_project 1 187138122 187142085 - MGP_129S1SvImJ_P0023904 Mixl1 protein_coding protein_coding MGP_129S1SvImJ_T0100348.1 MGP_129S1SvImJ_G0038415.1 mouse_genomes_project 1 84930611 84930735 + Gm24555 snoRNA snoRNA MGP_129S1SvImJ_T0012290.1 MGP_129S1SvImJ_G0010379.1 mouse_genomes_project 1 153220937 153221727 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098723.1 MGP_129S1SvImJ_G0036808.1 mouse_genomes_project 1 130522719 130522849 + Gm23370 scaRNA scaRNA MGP_129S1SvImJ_T0012238.1 MGP_129S1SvImJ_G0010327.1 mouse_genomes_project 1 125720090 125720467 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012343.1 MGP_129S1SvImJ_G0010432.1 mouse_genomes_project 1 172852479 172852846 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022193.1 MGP_129S1SvImJ_G0016499.1 mouse_genomes_project 1 137824314 137832854 + MGP_129S1SvImJ_P0022193 Chil1 protein_coding protein_coding MGP_129S1SvImJ_T0022194.1 MGP_129S1SvImJ_G0016499.1 mouse_genomes_project 1 137824542 137832847 + MGP_129S1SvImJ_P0022194 Chil1 protein_coding protein_coding MGP_129S1SvImJ_T0022195.1 MGP_129S1SvImJ_G0016499.1 mouse_genomes_project 1 137824542 137832999 + MGP_129S1SvImJ_P0022195 Chil1 protein_coding protein_coding MGP_129S1SvImJ_T0022196.1 MGP_129S1SvImJ_G0016499.1 mouse_genomes_project 1 137824612 137829375 + MGP_129S1SvImJ_P0022196 Chil1 protein_coding protein_coding MGP_129S1SvImJ_T0022197.1 MGP_129S1SvImJ_G0016499.1 mouse_genomes_project 1 137824619 137829385 + MGP_129S1SvImJ_P0022197 Chil1 protein_coding protein_coding MGP_129S1SvImJ_T0022198.1 MGP_129S1SvImJ_G0016499.1 mouse_genomes_project 1 137824620 137829662 + Chil1 protein_coding retained_intron MGP_129S1SvImJ_T0022199.1 MGP_129S1SvImJ_G0016499.1 mouse_genomes_project 1 137825943 137829444 + Chil1 protein_coding retained_intron MGP_129S1SvImJ_T0022200.1 MGP_129S1SvImJ_G0016499.1 mouse_genomes_project 1 137831943 137832845 + Chil1 protein_coding retained_intron MGP_129S1SvImJ_T0012092.1 MGP_129S1SvImJ_G0010181.1 mouse_genomes_project 1 65118461 65118840 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102046.1 MGP_129S1SvImJ_G0039881.1 mouse_genomes_project 1 19015246 19016358 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0012055.1 MGP_129S1SvImJ_G0010144.1 mouse_genomes_project 1 55072997 55073393 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011975.1 MGP_129S1SvImJ_G0010064.1 mouse_genomes_project 1 32338725 32339059 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005819.1 MGP_129S1SvImJ_G0004882.1 mouse_genomes_project 1 78638667 78668031 - Gm28387 lincRNA lincRNA MGP_129S1SvImJ_T0101834.1 MGP_129S1SvImJ_G0039787.1 mouse_genomes_project 1 99117232 99239779 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101835.1 MGP_129S1SvImJ_G0039787.1 mouse_genomes_project 1 99229481 99341961 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0102050.1 MGP_129S1SvImJ_G0039885.1 mouse_genomes_project 1 52954892 52959022 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0021643.1 MGP_129S1SvImJ_G0016379.1 mouse_genomes_project 1 109487010 109493897 - MGP_129S1SvImJ_P0021643 protein_coding protein_coding MGP_129S1SvImJ_T0012192.1 MGP_129S1SvImJ_G0010281.1 mouse_genomes_project 1 110190515 110191114 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022313.1 MGP_129S1SvImJ_G0016525.1 mouse_genomes_project 1 139202573 139358427 - MGP_129S1SvImJ_P0022313 Nav1 protein_coding protein_coding MGP_129S1SvImJ_T0022314.1 MGP_129S1SvImJ_G0016525.1 mouse_genomes_project 1 139202573 139358077 - MGP_129S1SvImJ_P0022314 Nav1 protein_coding protein_coding MGP_129S1SvImJ_T0022315.1 MGP_129S1SvImJ_G0016525.1 mouse_genomes_project 1 139206857 139380209 - MGP_129S1SvImJ_P0022315 Nav1 protein_coding protein_coding MGP_129S1SvImJ_T0022316.1 MGP_129S1SvImJ_G0016525.1 mouse_genomes_project 1 139220877 139222410 - Nav1 protein_coding retained_intron MGP_129S1SvImJ_T0022317.1 MGP_129S1SvImJ_G0016525.1 mouse_genomes_project 1 139223818 139237355 - MGP_129S1SvImJ_P0022317 Nav1 protein_coding protein_coding MGP_129S1SvImJ_T0022318.1 MGP_129S1SvImJ_G0016525.1 mouse_genomes_project 1 139226273 139229717 - Nav1 protein_coding retained_intron MGP_129S1SvImJ_T0022319.1 MGP_129S1SvImJ_G0016525.1 mouse_genomes_project 1 139226273 139281408 - Nav1 protein_coding retained_intron MGP_129S1SvImJ_T0022320.1 MGP_129S1SvImJ_G0016525.1 mouse_genomes_project 1 139227156 139281475 - Nav1 protein_coding processed_transcript MGP_129S1SvImJ_T0000834.1 MGP_129S1SvImJ_G0000768.1 mouse_genomes_project 1 202249389 202254134 - TEC TEC MGP_129S1SvImJ_T0000586.1 MGP_129S1SvImJ_G0000525.1 mouse_genomes_project 1 91285836 91287869 + TEC TEC MGP_129S1SvImJ_T0023517.1 MGP_129S1SvImJ_G0016770.1 mouse_genomes_project 1 177605752 177639549 + MGP_129S1SvImJ_P0023517 Slamf1 protein_coding protein_coding MGP_129S1SvImJ_T0023518.1 MGP_129S1SvImJ_G0016770.1 mouse_genomes_project 1 177605780 177634203 + Slamf1 protein_coding retained_intron MGP_129S1SvImJ_T0021341.1 MGP_129S1SvImJ_G0016310.1 mouse_genomes_project 1 92958229 93001791 - MGP_129S1SvImJ_P0021341 Per2 protein_coding protein_coding MGP_129S1SvImJ_T0021342.1 MGP_129S1SvImJ_G0016310.1 mouse_genomes_project 1 92990183 92992317 - Per2 protein_coding processed_transcript MGP_129S1SvImJ_T0018915.1 MGP_129S1SvImJ_G0015836.1 mouse_genomes_project 1 8300215 8606124 + MGP_129S1SvImJ_P0018915 Prex2 protein_coding protein_coding MGP_129S1SvImJ_T0018916.1 MGP_129S1SvImJ_G0015836.1 mouse_genomes_project 1 8300268 8303356 + Prex2 protein_coding retained_intron MGP_129S1SvImJ_T0018917.1 MGP_129S1SvImJ_G0015836.1 mouse_genomes_project 1 8397944 8452608 + Prex2 protein_coding retained_intron MGP_129S1SvImJ_T0018918.1 MGP_129S1SvImJ_G0015836.1 mouse_genomes_project 1 8443325 8463084 + Prex2 protein_coding retained_intron MGP_129S1SvImJ_T0018921.1 MGP_129S1SvImJ_G0015836.1 mouse_genomes_project 1 8568162 8600450 + MGP_129S1SvImJ_P0018921 Prex2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018922.1 MGP_129S1SvImJ_G0015836.1 mouse_genomes_project 1 8586477 8600649 + MGP_129S1SvImJ_P0018922 Prex2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0000765.1 MGP_129S1SvImJ_G0000702.1 mouse_genomes_project 1 178250436 178253170 - TEC TEC MGP_129S1SvImJ_T0022758.1 MGP_129S1SvImJ_G0016614.1 mouse_genomes_project 1 160488793 160502962 + MGP_129S1SvImJ_P0022758 Acbd6 protein_coding protein_coding MGP_129S1SvImJ_T0022759.1 MGP_129S1SvImJ_G0016614.1 mouse_genomes_project 1 160488795 160628612 + MGP_129S1SvImJ_P0022759 Acbd6 protein_coding protein_coding MGP_129S1SvImJ_T0022760.1 MGP_129S1SvImJ_G0016614.1 mouse_genomes_project 1 160488799 160518472 + MGP_129S1SvImJ_P0022760 Acbd6 protein_coding protein_coding MGP_129S1SvImJ_T0022761.1 MGP_129S1SvImJ_G0016614.1 mouse_genomes_project 1 160493790 160624379 + Acbd6 protein_coding processed_transcript MGP_129S1SvImJ_T0022762.1 MGP_129S1SvImJ_G0016614.1 mouse_genomes_project 1 160497921 160502933 + Acbd6 protein_coding retained_intron MGP_129S1SvImJ_T0022763.1 MGP_129S1SvImJ_G0016614.1 mouse_genomes_project 1 160624274 160625653 + MGP_129S1SvImJ_P0022763 Acbd6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024313.1 MGP_129S1SvImJ_G0016959.1 mouse_genomes_project 1 200256812 200266599 + MGP_129S1SvImJ_P0024313 A130010J15Rik protein_coding protein_coding MGP_129S1SvImJ_T0024315.1 MGP_129S1SvImJ_G0016959.1 mouse_genomes_project 1 200262234 200265065 + MGP_129S1SvImJ_P0024315 A130010J15Rik protein_coding protein_coding MGP_129S1SvImJ_T0024316.1 MGP_129S1SvImJ_G0016959.1 mouse_genomes_project 1 200262258 200263598 + MGP_129S1SvImJ_P0024316 A130010J15Rik protein_coding protein_coding MGP_129S1SvImJ_T0024317.1 MGP_129S1SvImJ_G0016959.1 mouse_genomes_project 1 200262343 200266599 + MGP_129S1SvImJ_P0024317 A130010J15Rik protein_coding protein_coding MGP_129S1SvImJ_T0024318.1 MGP_129S1SvImJ_G0016959.1 mouse_genomes_project 1 200262346 200265067 + MGP_129S1SvImJ_P0024318 A130010J15Rik protein_coding protein_coding MGP_129S1SvImJ_T0024319.1 MGP_129S1SvImJ_G0016959.1 mouse_genomes_project 1 200262346 200263193 + MGP_129S1SvImJ_P0024319 A130010J15Rik protein_coding protein_coding MGP_129S1SvImJ_T0024320.1 MGP_129S1SvImJ_G0016959.1 mouse_genomes_project 1 200262352 200263319 + MGP_129S1SvImJ_P0024320 A130010J15Rik protein_coding protein_coding MGP_129S1SvImJ_T0024321.1 MGP_129S1SvImJ_G0016959.1 mouse_genomes_project 1 200262510 200263362 + MGP_129S1SvImJ_P0024321 A130010J15Rik protein_coding protein_coding MGP_129S1SvImJ_T0000728.1 MGP_129S1SvImJ_G0000665.1 mouse_genomes_project 1 163639759 163642359 + TEC TEC MGP_129S1SvImJ_T0012312.1 MGP_129S1SvImJ_G0010401.1 mouse_genomes_project 1 160797368 160797627 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011263.1 MGP_129S1SvImJ_G0009379.1 mouse_genomes_project 1 36633558 36633795 + Gm23409 misc_RNA misc_RNA MGP_129S1SvImJ_T0011275.1 MGP_129S1SvImJ_G0009391.1 mouse_genomes_project 1 134517179 134517532 - Gm25717 misc_RNA misc_RNA MGP_129S1SvImJ_T0005851.1 MGP_129S1SvImJ_G0004909.1 mouse_genomes_project 1 91945976 91947084 - Gm28722 lincRNA lincRNA MGP_129S1SvImJ_T0002916.1 MGP_129S1SvImJ_G0002748.1 mouse_genomes_project 1 138844473 138848676 + Gm10535 antisense antisense MGP_129S1SvImJ_T0000533.1 MGP_129S1SvImJ_G0000472.1 mouse_genomes_project 1 68405604 68408063 - TEC TEC MGP_129S1SvImJ_T0005883.1 MGP_129S1SvImJ_G0004937.1 mouse_genomes_project 1 109956404 109963778 + Gm15389 lincRNA lincRNA MGP_129S1SvImJ_T0020126.1 MGP_129S1SvImJ_G0016074.1 mouse_genomes_project 1 60157890 60217007 + MGP_129S1SvImJ_P0020126 Carf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020127.1 MGP_129S1SvImJ_G0016074.1 mouse_genomes_project 1 60157907 60168705 + Carf protein_coding retained_intron MGP_129S1SvImJ_T0020128.1 MGP_129S1SvImJ_G0016074.1 mouse_genomes_project 1 60157907 60186109 + MGP_129S1SvImJ_P0020128 Carf protein_coding protein_coding MGP_129S1SvImJ_T0020129.1 MGP_129S1SvImJ_G0016074.1 mouse_genomes_project 1 60160889 60164124 + Carf protein_coding retained_intron MGP_129S1SvImJ_T0020130.1 MGP_129S1SvImJ_G0016074.1 mouse_genomes_project 1 60162324 60216662 + MGP_129S1SvImJ_P0020130 Carf protein_coding unknown_likely_coding MGP_129S1SvImJ_T0020131.1 MGP_129S1SvImJ_G0016074.1 mouse_genomes_project 1 60167745 60216775 + MGP_129S1SvImJ_P0020131 Carf protein_coding protein_coding MGP_129S1SvImJ_T0020132.1 MGP_129S1SvImJ_G0016074.1 mouse_genomes_project 1 60167745 60216775 + MGP_129S1SvImJ_P0020132 Carf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020133.1 MGP_129S1SvImJ_G0016074.1 mouse_genomes_project 1 60203387 60205803 + Carf protein_coding retained_intron MGP_129S1SvImJ_T0020134.1 MGP_129S1SvImJ_G0016074.1 mouse_genomes_project 1 60205039 60213197 + MGP_129S1SvImJ_P0020134 Carf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0009541.1 MGP_129S1SvImJ_G0007657.1 mouse_genomes_project 1 134927542 134927706 - Gm24273 miRNA miRNA MGP_129S1SvImJ_T0005944.1 MGP_129S1SvImJ_G0004985.1 mouse_genomes_project 1 141968403 141971789 + A430106G13Rik lincRNA lincRNA MGP_129S1SvImJ_T0100324.1 MGP_129S1SvImJ_G0038391.1 mouse_genomes_project 1 38262688 38262903 + Gm24826 snoRNA snoRNA MGP_129S1SvImJ_T0023671.1 MGP_129S1SvImJ_G0016818.1 mouse_genomes_project 1 180010761 180068815 - MGP_129S1SvImJ_P0023671 protein_coding protein_coding MGP_129S1SvImJ_T0000524.1 MGP_129S1SvImJ_G0000463.1 mouse_genomes_project 1 64915319 64920530 + TEC TEC MGP_129S1SvImJ_T0011866.1 MGP_129S1SvImJ_G0009955.1 mouse_genomes_project 1 242371 242851 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023301.1 MGP_129S1SvImJ_G0016721.1 mouse_genomes_project 1 175396994 175403181 - MGP_129S1SvImJ_P0023301 Rgs4 protein_coding protein_coding MGP_129S1SvImJ_T0023302.1 MGP_129S1SvImJ_G0016721.1 mouse_genomes_project 1 175396999 175403178 - MGP_129S1SvImJ_P0023302 Rgs4 protein_coding protein_coding MGP_129S1SvImJ_T0023303.1 MGP_129S1SvImJ_G0016721.1 mouse_genomes_project 1 175399397 175403159 - Rgs4 protein_coding retained_intron MGP_129S1SvImJ_T0102058.1 MGP_129S1SvImJ_G0039893.1 mouse_genomes_project 1 88401075 88404046 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0023895.1 MGP_129S1SvImJ_G0016871.1 mouse_genomes_project 1 187082131 187135767 + MGP_129S1SvImJ_P0023895 Lin9 protein_coding protein_coding MGP_129S1SvImJ_T0023896.1 MGP_129S1SvImJ_G0016871.1 mouse_genomes_project 1 187082315 187135774 + MGP_129S1SvImJ_P0023896 Lin9 protein_coding protein_coding MGP_129S1SvImJ_T0023897.1 MGP_129S1SvImJ_G0016871.1 mouse_genomes_project 1 187082334 187125831 + Lin9 protein_coding retained_intron MGP_129S1SvImJ_T0023898.1 MGP_129S1SvImJ_G0016871.1 mouse_genomes_project 1 187082336 187090175 + Lin9 protein_coding processed_transcript MGP_129S1SvImJ_T0023899.1 MGP_129S1SvImJ_G0016871.1 mouse_genomes_project 1 187082341 187135767 + MGP_129S1SvImJ_P0023899 Lin9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023900.1 MGP_129S1SvImJ_G0016871.1 mouse_genomes_project 1 187082347 187118940 + Lin9 protein_coding retained_intron MGP_129S1SvImJ_T0023901.1 MGP_129S1SvImJ_G0016871.1 mouse_genomes_project 1 187102959 187117992 + MGP_129S1SvImJ_P0023901 Lin9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023902.1 MGP_129S1SvImJ_G0016871.1 mouse_genomes_project 1 187123213 187133982 + Lin9 protein_coding retained_intron MGP_129S1SvImJ_T0023903.1 MGP_129S1SvImJ_G0016871.1 mouse_genomes_project 1 187125091 187135767 + Lin9 protein_coding retained_intron MGP_129S1SvImJ_T0012094.1 MGP_129S1SvImJ_G0010183.1 mouse_genomes_project 1 65658390 65658712 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012323.1 MGP_129S1SvImJ_G0010412.1 mouse_genomes_project 1 166130659 166131124 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099132.1 MGP_129S1SvImJ_G0037199.1 mouse_genomes_project 1 175466776 175466883 - Gm22114 snRNA snRNA MGP_129S1SvImJ_T0020160.1 MGP_129S1SvImJ_G0016078.1 mouse_genomes_project 1 60567478 60652822 - MGP_129S1SvImJ_P0020160 Raph1 protein_coding protein_coding MGP_129S1SvImJ_T0020161.1 MGP_129S1SvImJ_G0016078.1 mouse_genomes_project 1 60568371 60584737 - MGP_129S1SvImJ_P0020161 Raph1 protein_coding protein_coding MGP_129S1SvImJ_T0020162.1 MGP_129S1SvImJ_G0016078.1 mouse_genomes_project 1 60568422 60652808 - MGP_129S1SvImJ_P0020162 Raph1 protein_coding protein_coding MGP_129S1SvImJ_T0020163.1 MGP_129S1SvImJ_G0016078.1 mouse_genomes_project 1 60575862 60652812 - MGP_129S1SvImJ_P0020163 Raph1 protein_coding protein_coding MGP_129S1SvImJ_T0020164.1 MGP_129S1SvImJ_G0016078.1 mouse_genomes_project 1 60578509 60581468 - Raph1 protein_coding retained_intron MGP_129S1SvImJ_T0020165.1 MGP_129S1SvImJ_G0016078.1 mouse_genomes_project 1 60586789 60588452 - Raph1 protein_coding retained_intron MGP_129S1SvImJ_T0020166.1 MGP_129S1SvImJ_G0016078.1 mouse_genomes_project 1 60599553 60608005 - Raph1 protein_coding retained_intron MGP_129S1SvImJ_T0020167.1 MGP_129S1SvImJ_G0016078.1 mouse_genomes_project 1 60611880 60653147 - MGP_129S1SvImJ_P0020167 Raph1 protein_coding protein_coding MGP_129S1SvImJ_T0020282.1 MGP_129S1SvImJ_G0016104.1 mouse_genomes_project 1 65277844 65279914 - MGP_129S1SvImJ_P0020282 Crygb protein_coding protein_coding MGP_129S1SvImJ_T0012108.1 MGP_129S1SvImJ_G0010197.1 mouse_genomes_project 1 71571922 71572697 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099082.1 MGP_129S1SvImJ_G0037149.1 mouse_genomes_project 1 57291634 57291791 + Gm24014 snRNA snRNA MGP_129S1SvImJ_T0000609.1 MGP_129S1SvImJ_G0000548.1 mouse_genomes_project 1 108774688 108776772 - TEC TEC MGP_129S1SvImJ_T0000550.1 MGP_129S1SvImJ_G0000489.1 mouse_genomes_project 1 79186386 79187865 - TEC TEC MGP_129S1SvImJ_T0099114.1 MGP_129S1SvImJ_G0037181.1 mouse_genomes_project 1 133987566 133987673 - Gm23623 snRNA snRNA MGP_129S1SvImJ_T0024009.1 MGP_129S1SvImJ_G0016898.1 mouse_genomes_project 1 189424451 189523295 + MGP_129S1SvImJ_P0024009 Susd4 protein_coding protein_coding MGP_129S1SvImJ_T0024010.1 MGP_129S1SvImJ_G0016898.1 mouse_genomes_project 1 189424603 189562886 + MGP_129S1SvImJ_P0024010 Susd4 protein_coding protein_coding MGP_129S1SvImJ_T0024011.1 MGP_129S1SvImJ_G0016898.1 mouse_genomes_project 1 189424986 189501371 + MGP_129S1SvImJ_P0024011 Susd4 protein_coding protein_coding MGP_129S1SvImJ_T0024012.1 MGP_129S1SvImJ_G0016898.1 mouse_genomes_project 1 189425147 189501397 + MGP_129S1SvImJ_P0024012 Susd4 protein_coding protein_coding MGP_129S1SvImJ_T0024013.1 MGP_129S1SvImJ_G0016898.1 mouse_genomes_project 1 189425486 189564245 + MGP_129S1SvImJ_P0024013 Susd4 protein_coding protein_coding MGP_129S1SvImJ_T0012187.1 MGP_129S1SvImJ_G0010276.1 mouse_genomes_project 1 108238268 108239216 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023196.1 MGP_129S1SvImJ_G0016696.1 mouse_genomes_project 1 171139515 171208030 - MGP_129S1SvImJ_P0023196 Rcsd1 protein_coding protein_coding MGP_129S1SvImJ_T0023197.1 MGP_129S1SvImJ_G0016696.1 mouse_genomes_project 1 171141946 171207992 - MGP_129S1SvImJ_P0023197 Rcsd1 protein_coding protein_coding MGP_129S1SvImJ_T0023198.1 MGP_129S1SvImJ_G0016696.1 mouse_genomes_project 1 171161431 171209337 - MGP_129S1SvImJ_P0023198 Rcsd1 protein_coding protein_coding MGP_129S1SvImJ_T0023199.1 MGP_129S1SvImJ_G0016696.1 mouse_genomes_project 1 171204465 171209670 - Rcsd1 protein_coding retained_intron MGP_129S1SvImJ_T0023200.1 MGP_129S1SvImJ_G0016696.1 mouse_genomes_project 1 171208382 171209701 - Rcsd1 protein_coding processed_transcript MGP_129S1SvImJ_T0000727.1 MGP_129S1SvImJ_G0000664.1 mouse_genomes_project 1 163476623 163481455 + TEC TEC MGP_129S1SvImJ_T0012246.1 MGP_129S1SvImJ_G0010335.1 mouse_genomes_project 1 128765504 128766133 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020076.1 MGP_129S1SvImJ_G0016066.1 mouse_genomes_project 1 59445172 59449704 + MGP_129S1SvImJ_P0020076 Fzd7 protein_coding protein_coding MGP_129S1SvImJ_T0012086.1 MGP_129S1SvImJ_G0010175.1 mouse_genomes_project 1 63202846 63203092 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023404.1 MGP_129S1SvImJ_G0016747.1 mouse_genomes_project 1 177005835 177007160 + MGP_129S1SvImJ_P0023404 Apoa2 protein_coding protein_coding MGP_129S1SvImJ_T0023405.1 MGP_129S1SvImJ_G0016747.1 mouse_genomes_project 1 177005863 177007159 + MGP_129S1SvImJ_P0023405 Apoa2 protein_coding protein_coding MGP_129S1SvImJ_T0023406.1 MGP_129S1SvImJ_G0016747.1 mouse_genomes_project 1 177005865 177007154 + MGP_129S1SvImJ_P0023406 Apoa2 protein_coding protein_coding MGP_129S1SvImJ_T0023407.1 MGP_129S1SvImJ_G0016747.1 mouse_genomes_project 1 177005872 177007118 + MGP_129S1SvImJ_P0023407 Apoa2 protein_coding protein_coding MGP_129S1SvImJ_T0100326.1 MGP_129S1SvImJ_G0038393.1 mouse_genomes_project 1 38295361 38295471 - Snord89 snoRNA snoRNA MGP_129S1SvImJ_T0012023.1 MGP_129S1SvImJ_G0010112.1 mouse_genomes_project 1 45114528 45115602 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012277.1 MGP_129S1SvImJ_G0010366.1 mouse_genomes_project 1 145455017 145455579 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000425.1 MGP_129S1SvImJ_G0000367.1 mouse_genomes_project 1 19572112 19573433 - TEC TEC MGP_129S1SvImJ_T0024090.1 MGP_129S1SvImJ_G0016916.1 mouse_genomes_project 1 192095318 192145536 + Eprs protein_coding retained_intron MGP_129S1SvImJ_T0024091.1 MGP_129S1SvImJ_G0016916.1 mouse_genomes_project 1 192095318 192165772 + MGP_129S1SvImJ_P0024091 Eprs protein_coding protein_coding MGP_129S1SvImJ_T0024092.1 MGP_129S1SvImJ_G0016916.1 mouse_genomes_project 1 192095332 192099233 + Eprs protein_coding retained_intron MGP_129S1SvImJ_T0024093.1 MGP_129S1SvImJ_G0016916.1 mouse_genomes_project 1 192095406 192109236 + Eprs protein_coding retained_intron MGP_129S1SvImJ_T0024094.1 MGP_129S1SvImJ_G0016916.1 mouse_genomes_project 1 192095458 192114122 + MGP_129S1SvImJ_P0024094 Eprs protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024095.1 MGP_129S1SvImJ_G0016916.1 mouse_genomes_project 1 192097754 192105581 + Eprs protein_coding retained_intron MGP_129S1SvImJ_T0024096.1 MGP_129S1SvImJ_G0016916.1 mouse_genomes_project 1 192099875 192111164 + MGP_129S1SvImJ_P0024096 Eprs protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024097.1 MGP_129S1SvImJ_G0016916.1 mouse_genomes_project 1 192099882 192106600 + Eprs protein_coding retained_intron MGP_129S1SvImJ_T0024098.1 MGP_129S1SvImJ_G0016916.1 mouse_genomes_project 1 192134037 192138725 + Eprs protein_coding retained_intron MGP_129S1SvImJ_T0099077.1 MGP_129S1SvImJ_G0037144.1 mouse_genomes_project 1 44765389 44765496 - Gm23216 snRNA snRNA MGP_129S1SvImJ_T0021639.1 MGP_129S1SvImJ_G0016377.1 mouse_genomes_project 1 109253751 109258564 - MGP_129S1SvImJ_P0021639 Serpinb3a protein_coding protein_coding MGP_129S1SvImJ_T0021640.1 MGP_129S1SvImJ_G0016377.1 mouse_genomes_project 1 109253769 109259070 - MGP_129S1SvImJ_P0021640 Serpinb3a protein_coding protein_coding MGP_129S1SvImJ_T0012291.1 MGP_129S1SvImJ_G0010380.1 mouse_genomes_project 1 153530954 153531423 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005766.1 MGP_129S1SvImJ_G0004842.1 mouse_genomes_project 1 60858171 60865449 - Gm11579 lincRNA lincRNA MGP_129S1SvImJ_T0011886.1 MGP_129S1SvImJ_G0009975.1 mouse_genomes_project 1 4234599 4234924 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022121.1 MGP_129S1SvImJ_G0016481.1 mouse_genomes_project 1 136778455 136838254 + MGP_129S1SvImJ_P0022121 Plekha6 protein_coding protein_coding MGP_129S1SvImJ_T0022122.1 MGP_129S1SvImJ_G0016481.1 mouse_genomes_project 1 136790198 136833854 + MGP_129S1SvImJ_P0022122 Plekha6 protein_coding protein_coding MGP_129S1SvImJ_T0022123.1 MGP_129S1SvImJ_G0016481.1 mouse_genomes_project 1 136792200 136836035 + MGP_129S1SvImJ_P0022123 Plekha6 protein_coding protein_coding MGP_129S1SvImJ_T0022124.1 MGP_129S1SvImJ_G0016481.1 mouse_genomes_project 1 136804212 136807089 + Plekha6 protein_coding processed_transcript MGP_129S1SvImJ_T0022125.1 MGP_129S1SvImJ_G0016481.1 mouse_genomes_project 1 136809002 136816566 + MGP_129S1SvImJ_P0022125 Plekha6 protein_coding protein_coding MGP_129S1SvImJ_T0022126.1 MGP_129S1SvImJ_G0016481.1 mouse_genomes_project 1 136809008 136819708 + MGP_129S1SvImJ_P0022126 Plekha6 protein_coding protein_coding MGP_129S1SvImJ_T0022127.1 MGP_129S1SvImJ_G0016481.1 mouse_genomes_project 1 136826579 136829055 + Plekha6 protein_coding retained_intron MGP_129S1SvImJ_T0022128.1 MGP_129S1SvImJ_G0016481.1 mouse_genomes_project 1 136832767 136836436 + Plekha6 protein_coding retained_intron MGP_129S1SvImJ_T0005810.1 MGP_129S1SvImJ_G0004875.1 mouse_genomes_project 1 74183397 74437180 - 6030407O03Rik lincRNA lincRNA MGP_129S1SvImJ_T0005811.1 MGP_129S1SvImJ_G0004875.1 mouse_genomes_project 1 74183397 74305027 - 6030407O03Rik lincRNA lincRNA MGP_129S1SvImJ_T0020091.1 MGP_129S1SvImJ_G0016069.1 mouse_genomes_project 1 59665063 59672759 + Nop58 protein_coding processed_transcript MGP_129S1SvImJ_T0020092.1 MGP_129S1SvImJ_G0016069.1 mouse_genomes_project 1 59665069 59691576 + MGP_129S1SvImJ_P0020092 Nop58 protein_coding protein_coding MGP_129S1SvImJ_T0020093.1 MGP_129S1SvImJ_G0016069.1 mouse_genomes_project 1 59665077 59676162 + MGP_129S1SvImJ_P0020093 Nop58 protein_coding protein_coding MGP_129S1SvImJ_T0020094.1 MGP_129S1SvImJ_G0016069.1 mouse_genomes_project 1 59665095 59672781 + Nop58 protein_coding retained_intron MGP_129S1SvImJ_T0020095.1 MGP_129S1SvImJ_G0016069.1 mouse_genomes_project 1 59665098 59671082 + Nop58 protein_coding retained_intron MGP_129S1SvImJ_T0020096.1 MGP_129S1SvImJ_G0016069.1 mouse_genomes_project 1 59665101 59700795 + MGP_129S1SvImJ_P0020096 Nop58 protein_coding protein_coding MGP_129S1SvImJ_T0020097.1 MGP_129S1SvImJ_G0016069.1 mouse_genomes_project 1 59665113 59676137 + MGP_129S1SvImJ_P0020097 Nop58 protein_coding protein_coding MGP_129S1SvImJ_T0020098.1 MGP_129S1SvImJ_G0016069.1 mouse_genomes_project 1 59665146 59678507 + MGP_129S1SvImJ_P0020098 Nop58 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020099.1 MGP_129S1SvImJ_G0016069.1 mouse_genomes_project 1 59670271 59678471 + Nop58 protein_coding retained_intron MGP_129S1SvImJ_T0020100.1 MGP_129S1SvImJ_G0016069.1 mouse_genomes_project 1 59672536 59684275 + Nop58 protein_coding retained_intron MGP_129S1SvImJ_T0020101.1 MGP_129S1SvImJ_G0016069.1 mouse_genomes_project 1 59676111 59684227 + MGP_129S1SvImJ_P0020101 Nop58 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020102.1 MGP_129S1SvImJ_G0016069.1 mouse_genomes_project 1 59678500 59687130 + MGP_129S1SvImJ_P0020102 Nop58 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020103.1 MGP_129S1SvImJ_G0016069.1 mouse_genomes_project 1 59684224 59689165 + MGP_129S1SvImJ_P0020103 Nop58 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020104.1 MGP_129S1SvImJ_G0016069.1 mouse_genomes_project 1 59684263 59691345 + MGP_129S1SvImJ_P0020104 Nop58 protein_coding protein_coding MGP_129S1SvImJ_T0020105.1 MGP_129S1SvImJ_G0016069.1 mouse_genomes_project 1 59684774 59691346 + MGP_129S1SvImJ_P0020105 Nop58 protein_coding protein_coding MGP_129S1SvImJ_T0012242.1 MGP_129S1SvImJ_G0010331.1 mouse_genomes_project 1 126220504 126220753 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101581.1 MGP_129S1SvImJ_G0039643.1 mouse_genomes_project 1 118204566 118220824 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101582.1 MGP_129S1SvImJ_G0039643.1 mouse_genomes_project 1 118204981 118206168 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101583.1 MGP_129S1SvImJ_G0039643.1 mouse_genomes_project 1 118205409 118220829 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0022822.1 MGP_129S1SvImJ_G0016625.1 mouse_genomes_project 1 161521915 161590022 + MGP_129S1SvImJ_P0022822 Abl2 protein_coding protein_coding MGP_129S1SvImJ_T0022823.1 MGP_129S1SvImJ_G0016625.1 mouse_genomes_project 1 161522116 161616484 + MGP_129S1SvImJ_P0022823 Abl2 protein_coding protein_coding MGP_129S1SvImJ_T0022824.1 MGP_129S1SvImJ_G0016625.1 mouse_genomes_project 1 161522178 161609653 + MGP_129S1SvImJ_P0022824 Abl2 protein_coding protein_coding MGP_129S1SvImJ_T0022825.1 MGP_129S1SvImJ_G0016625.1 mouse_genomes_project 1 161580607 161595528 + MGP_129S1SvImJ_P0022825 Abl2 protein_coding protein_coding MGP_129S1SvImJ_T0005745.1 MGP_129S1SvImJ_G0004827.1 mouse_genomes_project 1 50693378 50695899 + Gm29325 lincRNA lincRNA MGP_129S1SvImJ_T0000505.1 MGP_129S1SvImJ_G0000444.1 mouse_genomes_project 1 58730233 58734543 + TEC TEC MGP_129S1SvImJ_T0021903.1 MGP_129S1SvImJ_G0016432.1 mouse_genomes_project 1 132580173 132733786 + Thsd7b protein_coding retained_intron MGP_129S1SvImJ_T0021904.1 MGP_129S1SvImJ_G0016432.1 mouse_genomes_project 1 132580215 133540512 + MGP_129S1SvImJ_P0021904 Thsd7b protein_coding protein_coding MGP_129S1SvImJ_T0021905.1 MGP_129S1SvImJ_G0016432.1 mouse_genomes_project 1 132580334 133359734 + MGP_129S1SvImJ_P0021905 Thsd7b protein_coding protein_coding MGP_129S1SvImJ_T0021906.1 MGP_129S1SvImJ_G0016432.1 mouse_genomes_project 1 132580356 132941079 + Thsd7b protein_coding processed_transcript MGP_129S1SvImJ_T0021907.1 MGP_129S1SvImJ_G0016432.1 mouse_genomes_project 1 132843652 132941113 + MGP_129S1SvImJ_P0021907 Thsd7b protein_coding protein_coding MGP_129S1SvImJ_T0021908.1 MGP_129S1SvImJ_G0016432.1 mouse_genomes_project 1 132926341 132929110 + Thsd7b protein_coding retained_intron MGP_129S1SvImJ_T0021909.1 MGP_129S1SvImJ_G0016432.1 mouse_genomes_project 1 133228206 133504558 + Thsd7b protein_coding processed_transcript MGP_129S1SvImJ_T0021910.1 MGP_129S1SvImJ_G0016432.1 mouse_genomes_project 1 133476990 133540510 + Thsd7b protein_coding processed_transcript MGP_129S1SvImJ_T0021911.1 MGP_129S1SvImJ_G0016432.1 mouse_genomes_project 1 133477005 133478558 + Thsd7b protein_coding processed_transcript MGP_129S1SvImJ_T0002774.1 MGP_129S1SvImJ_G0002643.1 mouse_genomes_project 1 10749707 10760114 + Gm29570 antisense antisense MGP_129S1SvImJ_T0011915.1 MGP_129S1SvImJ_G0010004.1 mouse_genomes_project 1 10423161 10423482 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021854.1 MGP_129S1SvImJ_G0016423.1 mouse_genomes_project 1 131036570 131062753 - MGP_129S1SvImJ_P0021854 Map3k19 protein_coding protein_coding MGP_129S1SvImJ_T0021855.1 MGP_129S1SvImJ_G0016423.1 mouse_genomes_project 1 131036579 131062753 - MGP_129S1SvImJ_P0021855 Map3k19 protein_coding protein_coding MGP_129S1SvImJ_T0021856.1 MGP_129S1SvImJ_G0016423.1 mouse_genomes_project 1 131036579 131062753 - MGP_129S1SvImJ_P0021856 Map3k19 protein_coding protein_coding MGP_129S1SvImJ_T0021857.1 MGP_129S1SvImJ_G0016423.1 mouse_genomes_project 1 131036588 131073716 - MGP_129S1SvImJ_P0021857 Map3k19 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0021858.1 MGP_129S1SvImJ_G0016423.1 mouse_genomes_project 1 131036588 131062753 - MGP_129S1SvImJ_P0021858 Map3k19 protein_coding protein_coding MGP_129S1SvImJ_T0012144.1 MGP_129S1SvImJ_G0010233.1 mouse_genomes_project 1 88449886 88451688 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002979.1 MGP_129S1SvImJ_G0002800.1 mouse_genomes_project 1 183603692 183604439 - Gm26801 antisense antisense MGP_129S1SvImJ_T0002980.1 MGP_129S1SvImJ_G0002800.1 mouse_genomes_project 1 183604401 183619365 - Gm26801 antisense antisense MGP_129S1SvImJ_T0021845.1 MGP_129S1SvImJ_G0016421.1 mouse_genomes_project 1 130949530 130986473 + MGP_129S1SvImJ_P0021845 Acmsd protein_coding protein_coding MGP_129S1SvImJ_T0021846.1 MGP_129S1SvImJ_G0016421.1 mouse_genomes_project 1 130975264 130986473 + Acmsd protein_coding processed_transcript MGP_129S1SvImJ_T0000426.1 MGP_129S1SvImJ_G0000368.1 mouse_genomes_project 1 21033980 21034703 - TEC TEC MGP_129S1SvImJ_T0000427.1 MGP_129S1SvImJ_G0000368.1 mouse_genomes_project 1 21034282 21034702 - TEC TEC MGP_129S1SvImJ_T0006025.1 MGP_129S1SvImJ_G0005051.1 mouse_genomes_project 1 187555137 187557545 + Gm37406 lincRNA lincRNA MGP_129S1SvImJ_T0022466.1 MGP_129S1SvImJ_G0016554.1 mouse_genomes_project 1 143569113 143592016 + MGP_129S1SvImJ_P0022466 F13b protein_coding protein_coding MGP_129S1SvImJ_T0022467.1 MGP_129S1SvImJ_G0016554.1 mouse_genomes_project 1 143584657 143586168 + F13b protein_coding processed_transcript MGP_129S1SvImJ_T0005839.1 MGP_129S1SvImJ_G0004898.1 mouse_genomes_project 1 89884324 89890171 + Gm28888 lincRNA lincRNA MGP_129S1SvImJ_T0006047.1 MGP_129S1SvImJ_G0005064.1 mouse_genomes_project 1 191026346 191032414 - Gm37712 lincRNA lincRNA MGP_129S1SvImJ_T0023333.1 MGP_129S1SvImJ_G0016730.1 mouse_genomes_project 1 175995814 176019985 - Nos1ap protein_coding processed_transcript MGP_129S1SvImJ_T0023335.1 MGP_129S1SvImJ_G0016730.1 mouse_genomes_project 1 176009814 176305031 - MGP_129S1SvImJ_P0023335 Nos1ap protein_coding protein_coding MGP_129S1SvImJ_T0023336.1 MGP_129S1SvImJ_G0016730.1 mouse_genomes_project 1 176009854 176013131 - Nos1ap protein_coding retained_intron MGP_129S1SvImJ_T0023337.1 MGP_129S1SvImJ_G0016730.1 mouse_genomes_project 1 176011067 176016695 - Nos1ap protein_coding processed_transcript MGP_129S1SvImJ_T0023338.1 MGP_129S1SvImJ_G0016730.1 mouse_genomes_project 1 176019797 176304994 - MGP_129S1SvImJ_P0023338 Nos1ap protein_coding protein_coding MGP_129S1SvImJ_T0023339.1 MGP_129S1SvImJ_G0016730.1 mouse_genomes_project 1 176019943 176304467 - MGP_129S1SvImJ_P0023339 Nos1ap protein_coding protein_coding MGP_129S1SvImJ_T0023340.1 MGP_129S1SvImJ_G0016730.1 mouse_genomes_project 1 176030397 176158549 - Nos1ap protein_coding processed_transcript MGP_129S1SvImJ_T0023341.1 MGP_129S1SvImJ_G0016730.1 mouse_genomes_project 1 176067343 176305019 - Nos1ap protein_coding retained_intron MGP_129S1SvImJ_T0019134.1 MGP_129S1SvImJ_G0015889.1 mouse_genomes_project 1 22020322 22098167 + MGP_129S1SvImJ_P0019134 Col9a1 protein_coding protein_coding MGP_129S1SvImJ_T0019135.1 MGP_129S1SvImJ_G0015889.1 mouse_genomes_project 1 22038684 22098167 + MGP_129S1SvImJ_P0019135 Col9a1 protein_coding protein_coding MGP_129S1SvImJ_T0019136.1 MGP_129S1SvImJ_G0015889.1 mouse_genomes_project 1 22040514 22065653 + Col9a1 protein_coding processed_transcript MGP_129S1SvImJ_T0019137.1 MGP_129S1SvImJ_G0015889.1 mouse_genomes_project 1 22074384 22075823 + Col9a1 protein_coding processed_transcript MGP_129S1SvImJ_T0098415.1 MGP_129S1SvImJ_G0036500.1 mouse_genomes_project 1 77805406 77805500 + Gm25974 rRNA rRNA MGP_129S1SvImJ_T0006036.1 MGP_129S1SvImJ_G0005057.1 mouse_genomes_project 1 189342858 189343357 + Gm37218 lincRNA lincRNA MGP_129S1SvImJ_T0020216.1 MGP_129S1SvImJ_G0016087.1 mouse_genomes_project 1 63325424 63359729 - MGP_129S1SvImJ_P0020216 Gpr1 protein_coding protein_coding MGP_129S1SvImJ_T0020217.1 MGP_129S1SvImJ_G0016087.1 mouse_genomes_project 1 63352216 63359409 - Gpr1 protein_coding processed_transcript MGP_129S1SvImJ_T0006079.1 MGP_129S1SvImJ_G0005090.1 mouse_genomes_project 1 200120978 200122411 - Gm31406 lincRNA lincRNA MGP_129S1SvImJ_T0005955.1 MGP_129S1SvImJ_G0004994.1 mouse_genomes_project 1 154804005 154811279 - Ptgs2os2 lincRNA lincRNA MGP_129S1SvImJ_T0019666.1 MGP_129S1SvImJ_G0015991.1 mouse_genomes_project 1 43582456 43827139 + MGP_129S1SvImJ_P0019666 Gulp1 protein_coding protein_coding MGP_129S1SvImJ_T0019667.1 MGP_129S1SvImJ_G0015991.1 mouse_genomes_project 1 43582638 43816760 + MGP_129S1SvImJ_P0019667 Gulp1 protein_coding protein_coding MGP_129S1SvImJ_T0019668.1 MGP_129S1SvImJ_G0015991.1 mouse_genomes_project 1 43582638 43827127 + MGP_129S1SvImJ_P0019668 Gulp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019669.1 MGP_129S1SvImJ_G0015991.1 mouse_genomes_project 1 43582672 43816431 + Gulp1 protein_coding processed_transcript MGP_129S1SvImJ_T0019670.1 MGP_129S1SvImJ_G0015991.1 mouse_genomes_project 1 43583542 43734443 + MGP_129S1SvImJ_P0019670 Gulp1 protein_coding protein_coding MGP_129S1SvImJ_T0019671.1 MGP_129S1SvImJ_G0015991.1 mouse_genomes_project 1 43721724 43827126 + MGP_129S1SvImJ_P0019671 Gulp1 protein_coding protein_coding MGP_129S1SvImJ_T0012184.1 MGP_129S1SvImJ_G0010273.1 mouse_genomes_project 1 107720656 107721273 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002843.1 MGP_129S1SvImJ_G0002696.1 mouse_genomes_project 1 66574016 66581935 - Gm10558 antisense antisense MGP_129S1SvImJ_T0009555.1 MGP_129S1SvImJ_G0007671.1 mouse_genomes_project 1 164484540 164484606 + Mir1843b miRNA miRNA MGP_129S1SvImJ_T0023507.1 MGP_129S1SvImJ_G0016767.1 mouse_genomes_project 1 177409683 177428300 - MGP_129S1SvImJ_P0023507 Ly9 protein_coding protein_coding MGP_129S1SvImJ_T0023508.1 MGP_129S1SvImJ_G0016767.1 mouse_genomes_project 1 177409692 177428248 - MGP_129S1SvImJ_P0023508 Ly9 protein_coding protein_coding MGP_129S1SvImJ_T0023509.1 MGP_129S1SvImJ_G0016767.1 mouse_genomes_project 1 177409708 177428224 - MGP_129S1SvImJ_P0023509 Ly9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023510.1 MGP_129S1SvImJ_G0016767.1 mouse_genomes_project 1 177412085 177428219 - MGP_129S1SvImJ_P0023510 Ly9 protein_coding protein_coding MGP_129S1SvImJ_T0023511.1 MGP_129S1SvImJ_G0016767.1 mouse_genomes_project 1 177421480 177428250 - Ly9 protein_coding retained_intron MGP_129S1SvImJ_T0019715.1 MGP_129S1SvImJ_G0016003.1 mouse_genomes_project 1 50952256 50964292 - MGP_129S1SvImJ_P0019715 Nabp1 protein_coding protein_coding MGP_129S1SvImJ_T0019716.1 MGP_129S1SvImJ_G0016003.1 mouse_genomes_project 1 50952263 50964777 - MGP_129S1SvImJ_P0019716 Nabp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019717.1 MGP_129S1SvImJ_G0016003.1 mouse_genomes_project 1 50952408 50964444 - MGP_129S1SvImJ_P0019717 Nabp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019718.1 MGP_129S1SvImJ_G0016003.1 mouse_genomes_project 1 50956259 50964777 - MGP_129S1SvImJ_P0019718 Nabp1 protein_coding protein_coding MGP_129S1SvImJ_T0019719.1 MGP_129S1SvImJ_G0016003.1 mouse_genomes_project 1 50957741 50959791 - Nabp1 protein_coding retained_intron MGP_129S1SvImJ_T0019720.1 MGP_129S1SvImJ_G0016003.1 mouse_genomes_project 1 50961968 50964777 - Nabp1 protein_coding retained_intron MGP_129S1SvImJ_T0023421.1 MGP_129S1SvImJ_G0016751.1 mouse_genomes_project 1 177057533 177064065 + MGP_129S1SvImJ_P0023421 B4galt3 protein_coding protein_coding MGP_129S1SvImJ_T0023422.1 MGP_129S1SvImJ_G0016751.1 mouse_genomes_project 1 177057544 177061484 + MGP_129S1SvImJ_P0023422 B4galt3 protein_coding protein_coding MGP_129S1SvImJ_T0023423.1 MGP_129S1SvImJ_G0016751.1 mouse_genomes_project 1 177057548 177064066 + MGP_129S1SvImJ_P0023423 B4galt3 protein_coding protein_coding MGP_129S1SvImJ_T0023424.1 MGP_129S1SvImJ_G0016751.1 mouse_genomes_project 1 177057548 177059135 + MGP_129S1SvImJ_P0023424 B4galt3 protein_coding protein_coding MGP_129S1SvImJ_T0023425.1 MGP_129S1SvImJ_G0016751.1 mouse_genomes_project 1 177057559 177059236 + B4galt3 protein_coding retained_intron MGP_129S1SvImJ_T0023426.1 MGP_129S1SvImJ_G0016751.1 mouse_genomes_project 1 177057570 177064065 + MGP_129S1SvImJ_P0023426 B4galt3 protein_coding protein_coding MGP_129S1SvImJ_T0023427.1 MGP_129S1SvImJ_G0016751.1 mouse_genomes_project 1 177057579 177064066 + B4galt3 protein_coding retained_intron MGP_129S1SvImJ_T0023428.1 MGP_129S1SvImJ_G0016751.1 mouse_genomes_project 1 177057613 177058565 + B4galt3 protein_coding processed_transcript MGP_129S1SvImJ_T0023429.1 MGP_129S1SvImJ_G0016751.1 mouse_genomes_project 1 177058023 177058838 + B4galt3 protein_coding retained_intron MGP_129S1SvImJ_T0023430.1 MGP_129S1SvImJ_G0016751.1 mouse_genomes_project 1 177058835 177059800 + MGP_129S1SvImJ_P0023430 B4galt3 protein_coding protein_coding MGP_129S1SvImJ_T0023431.1 MGP_129S1SvImJ_G0016751.1 mouse_genomes_project 1 177060711 177064064 + B4galt3 protein_coding retained_intron MGP_129S1SvImJ_T0023986.1 MGP_129S1SvImJ_G0016891.1 mouse_genomes_project 1 188780242 188781418 - MGP_129S1SvImJ_P0023986 Vmn1r1 protein_coding protein_coding MGP_129S1SvImJ_T0006070.1 MGP_129S1SvImJ_G0005083.1 mouse_genomes_project 1 198007627 198009613 + Gm31373 lincRNA lincRNA MGP_129S1SvImJ_T0021240.1 MGP_129S1SvImJ_G0016292.1 mouse_genomes_project 1 91415836 91480552 - MGP_129S1SvImJ_P0021240 Asb18 protein_coding protein_coding MGP_129S1SvImJ_T0021241.1 MGP_129S1SvImJ_G0016292.1 mouse_genomes_project 1 91419363 91480641 - MGP_129S1SvImJ_P0021241 Asb18 protein_coding protein_coding MGP_129S1SvImJ_T0021242.1 MGP_129S1SvImJ_G0016292.1 mouse_genomes_project 1 91419450 91480552 - MGP_129S1SvImJ_P0021242 Asb18 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021243.1 MGP_129S1SvImJ_G0016292.1 mouse_genomes_project 1 91419451 91480552 - MGP_129S1SvImJ_P0021243 Asb18 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0005914.1 MGP_129S1SvImJ_G0004960.1 mouse_genomes_project 1 128534430 128537260 + Gm28706 lincRNA lincRNA MGP_129S1SvImJ_T0002876.1 MGP_129S1SvImJ_G0002721.1 mouse_genomes_project 1 94513614 94516001 - 5033417F24Rik antisense antisense MGP_129S1SvImJ_T0012018.1 MGP_129S1SvImJ_G0010107.1 mouse_genomes_project 1 44848388 44849569 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024080.1 MGP_129S1SvImJ_G0016914.1 mouse_genomes_project 1 192003847 192050892 - MGP_129S1SvImJ_P0024080 Iars2 protein_coding protein_coding MGP_129S1SvImJ_T0024081.1 MGP_129S1SvImJ_G0016914.1 mouse_genomes_project 1 192004686 192007365 - Iars2 protein_coding processed_transcript MGP_129S1SvImJ_T0024082.1 MGP_129S1SvImJ_G0016914.1 mouse_genomes_project 1 192015288 192050892 - MGP_129S1SvImJ_P0024082 Iars2 protein_coding protein_coding MGP_129S1SvImJ_T0024083.1 MGP_129S1SvImJ_G0016914.1 mouse_genomes_project 1 192031043 192050892 - MGP_129S1SvImJ_P0024083 Iars2 protein_coding protein_coding MGP_129S1SvImJ_T0024084.1 MGP_129S1SvImJ_G0016914.1 mouse_genomes_project 1 192040020 192050892 - Iars2 protein_coding retained_intron MGP_129S1SvImJ_T0005828.1 MGP_129S1SvImJ_G0004889.1 mouse_genomes_project 1 81266068 81297925 + 1700016L21Rik lincRNA lincRNA MGP_129S1SvImJ_T0005829.1 MGP_129S1SvImJ_G0004889.1 mouse_genomes_project 1 81266076 81302132 + 1700016L21Rik lincRNA lincRNA MGP_129S1SvImJ_T0000629.1 MGP_129S1SvImJ_G0000568.1 mouse_genomes_project 1 127412655 127416319 - TEC TEC MGP_129S1SvImJ_T0000733.1 MGP_129S1SvImJ_G0000670.1 mouse_genomes_project 1 165406333 165408207 + TEC TEC MGP_129S1SvImJ_T0021777.1 MGP_129S1SvImJ_G0016408.1 mouse_genomes_project 1 123415074 123420646 + MGP_129S1SvImJ_P0021777 En1 protein_coding protein_coding MGP_129S1SvImJ_T0000525.1 MGP_129S1SvImJ_G0000464.1 mouse_genomes_project 1 66952505 66954261 - TEC TEC MGP_129S1SvImJ_T0100366.1 MGP_129S1SvImJ_G0038433.1 mouse_genomes_project 1 121147935 121148066 - Gm26080 snoRNA snoRNA MGP_129S1SvImJ_T0012077.1 MGP_129S1SvImJ_G0010166.1 mouse_genomes_project 1 61028981 61029217 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100329.1 MGP_129S1SvImJ_G0038396.1 mouse_genomes_project 1 42943389 42943514 + Gm26352 snoRNA snoRNA MGP_129S1SvImJ_T0024244.1 MGP_129S1SvImJ_G0016946.1 mouse_genomes_project 1 198628690 198680018 + MGP_129S1SvImJ_P0024244 Ints7 protein_coding protein_coding MGP_129S1SvImJ_T0024245.1 MGP_129S1SvImJ_G0016946.1 mouse_genomes_project 1 198628781 198665992 + Ints7 protein_coding retained_intron MGP_129S1SvImJ_T0024246.1 MGP_129S1SvImJ_G0016946.1 mouse_genomes_project 1 198628796 198677954 + MGP_129S1SvImJ_P0024246 Ints7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024247.1 MGP_129S1SvImJ_G0016946.1 mouse_genomes_project 1 198628816 198664608 + MGP_129S1SvImJ_P0024247 Ints7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024248.1 MGP_129S1SvImJ_G0016946.1 mouse_genomes_project 1 198628816 198679050 + MGP_129S1SvImJ_P0024248 Ints7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024249.1 MGP_129S1SvImJ_G0016946.1 mouse_genomes_project 1 198628830 198638202 + Ints7 protein_coding retained_intron MGP_129S1SvImJ_T0098285.1 MGP_129S1SvImJ_G0036370.1 mouse_genomes_project 1 33146273 33147222 + pseudogene pseudogene MGP_129S1SvImJ_T0099140.1 MGP_129S1SvImJ_G0037207.1 mouse_genomes_project 1 181909373 181909549 + Gm25560 snRNA snRNA MGP_129S1SvImJ_T0098722.1 MGP_129S1SvImJ_G0036807.1 mouse_genomes_project 1 89157176 89157441 + Scarna6 scaRNA scaRNA MGP_129S1SvImJ_T0023084.1 MGP_129S1SvImJ_G0016668.1 mouse_genomes_project 1 168330830 168361420 - MGP_129S1SvImJ_P0023084 Fmo3 protein_coding protein_coding MGP_129S1SvImJ_T0023085.1 MGP_129S1SvImJ_G0016668.1 mouse_genomes_project 1 168340558 168361421 - Fmo3 protein_coding retained_intron MGP_129S1SvImJ_T0005858.1 MGP_129S1SvImJ_G0004916.1 mouse_genomes_project 1 93558270 93561848 + Gm26720 lincRNA lincRNA MGP_129S1SvImJ_T0012326.1 MGP_129S1SvImJ_G0010415.1 mouse_genomes_project 1 167131149 167132353 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002896.1 MGP_129S1SvImJ_G0002734.1 mouse_genomes_project 1 131180247 131188173 + Gm28800 antisense antisense MGP_129S1SvImJ_T0098777.1 MGP_129S1SvImJ_G0036862.1 mouse_genomes_project 1 52222446 52224937 - Gm29670 sense_intronic sense_intronic MGP_129S1SvImJ_T0000598.1 MGP_129S1SvImJ_G0000537.1 mouse_genomes_project 1 98027523 98029817 + TEC TEC MGP_129S1SvImJ_T0000529.1 MGP_129S1SvImJ_G0000468.1 mouse_genomes_project 1 67057543 67058682 - TEC TEC MGP_129S1SvImJ_T0000803.1 MGP_129S1SvImJ_G0000738.1 mouse_genomes_project 1 191092362 191093117 + TEC TEC MGP_129S1SvImJ_T0102103.1 MGP_129S1SvImJ_G0039938.1 mouse_genomes_project 1 183009483 183009643 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0005746.1 MGP_129S1SvImJ_G0004828.1 mouse_genomes_project 1 50944329 50945329 - 1700072G22Rik lincRNA lincRNA MGP_129S1SvImJ_T0005787.1 MGP_129S1SvImJ_G0004860.1 mouse_genomes_project 1 68075996 68088833 + Gm15669 lincRNA lincRNA MGP_129S1SvImJ_T0002934.1 MGP_129S1SvImJ_G0002762.1 mouse_genomes_project 1 156628186 156639419 + Gm28610 antisense antisense MGP_129S1SvImJ_T0021770.1 MGP_129S1SvImJ_G0016405.1 mouse_genomes_project 1 122979381 123055170 - MGP_129S1SvImJ_P0021770 Steap3 protein_coding protein_coding MGP_129S1SvImJ_T0021771.1 MGP_129S1SvImJ_G0016405.1 mouse_genomes_project 1 123012796 123060997 - MGP_129S1SvImJ_P0021771 Steap3 protein_coding protein_coding MGP_129S1SvImJ_T0021772.1 MGP_129S1SvImJ_G0016405.1 mouse_genomes_project 1 123015058 123060336 - MGP_129S1SvImJ_P0021772 Steap3 protein_coding protein_coding MGP_129S1SvImJ_T0021773.1 MGP_129S1SvImJ_G0016405.1 mouse_genomes_project 1 123017505 123060143 - MGP_129S1SvImJ_P0021773 Steap3 protein_coding protein_coding MGP_129S1SvImJ_T0003023.1 MGP_129S1SvImJ_G0002833.1 mouse_genomes_project 1 200291798 200316152 + 4930570N18Rik antisense antisense MGP_129S1SvImJ_T0100332.1 MGP_129S1SvImJ_G0038399.1 mouse_genomes_project 1 52627797 52627898 + Gm24349 snoRNA snoRNA MGP_129S1SvImJ_T0009523.1 MGP_129S1SvImJ_G0007639.1 mouse_genomes_project 1 86958863 86958990 + Mir8096 miRNA miRNA MGP_129S1SvImJ_T0017056.1 MGP_129S1SvImJ_G0015112.1 mouse_genomes_project 1 138844011 138844949 - Ptprv processed_transcript retained_intron MGP_129S1SvImJ_T0017057.1 MGP_129S1SvImJ_G0015112.1 mouse_genomes_project 1 138844012 138869360 - Ptprv processed_transcript processed_transcript MGP_129S1SvImJ_T0017058.1 MGP_129S1SvImJ_G0015112.1 mouse_genomes_project 1 138844014 138844821 - Ptprv processed_transcript processed_transcript MGP_129S1SvImJ_T0017059.1 MGP_129S1SvImJ_G0015112.1 mouse_genomes_project 1 138844141 138845102 - Ptprv processed_transcript processed_transcript MGP_129S1SvImJ_T0017060.1 MGP_129S1SvImJ_G0015112.1 mouse_genomes_project 1 138845525 138845974 - Ptprv processed_transcript retained_intron MGP_129S1SvImJ_T0017061.1 MGP_129S1SvImJ_G0015112.1 mouse_genomes_project 1 138845784 138847050 - Ptprv processed_transcript retained_intron MGP_129S1SvImJ_T0017062.1 MGP_129S1SvImJ_G0015112.1 mouse_genomes_project 1 138846678 138847604 - Ptprv processed_transcript processed_transcript MGP_129S1SvImJ_T0017063.1 MGP_129S1SvImJ_G0015112.1 mouse_genomes_project 1 138863227 138869334 - Ptprv processed_transcript processed_transcript MGP_129S1SvImJ_T0017064.1 MGP_129S1SvImJ_G0015112.1 mouse_genomes_project 1 138863245 138865140 - Ptprv processed_transcript retained_intron MGP_129S1SvImJ_T0017065.1 MGP_129S1SvImJ_G0015112.1 mouse_genomes_project 1 138866326 138867930 - Ptprv processed_transcript processed_transcript MGP_129S1SvImJ_T0017066.1 MGP_129S1SvImJ_G0015112.1 mouse_genomes_project 1 138866437 138869309 - Ptprv processed_transcript processed_transcript MGP_129S1SvImJ_T0009526.1 MGP_129S1SvImJ_G0007642.1 mouse_genomes_project 1 87936954 87937011 - Gm22955 miRNA miRNA MGP_129S1SvImJ_T0021819.1 MGP_129S1SvImJ_G0016417.1 mouse_genomes_project 1 128980286 129026438 - MGP_129S1SvImJ_P0021819 Lypd1 protein_coding protein_coding MGP_129S1SvImJ_T0021820.1 MGP_129S1SvImJ_G0016417.1 mouse_genomes_project 1 128984945 129025611 - MGP_129S1SvImJ_P0021820 Lypd1 protein_coding protein_coding MGP_129S1SvImJ_T0021821.1 MGP_129S1SvImJ_G0016417.1 mouse_genomes_project 1 128984979 129027153 - MGP_129S1SvImJ_P0021821 Lypd1 protein_coding protein_coding MGP_129S1SvImJ_T0021822.1 MGP_129S1SvImJ_G0016417.1 mouse_genomes_project 1 128985762 129025140 - MGP_129S1SvImJ_P0021822 Lypd1 protein_coding protein_coding MGP_129S1SvImJ_T0021823.1 MGP_129S1SvImJ_G0016417.1 mouse_genomes_project 1 128986179 129027326 - MGP_129S1SvImJ_P0021823 Lypd1 protein_coding protein_coding MGP_129S1SvImJ_T0012261.1 MGP_129S1SvImJ_G0010350.1 mouse_genomes_project 1 137755827 137756183 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023236.1 MGP_129S1SvImJ_G0016702.1 mouse_genomes_project 1 171723781 171758432 - MGP_129S1SvImJ_P0023236 Mael protein_coding protein_coding MGP_129S1SvImJ_T0023237.1 MGP_129S1SvImJ_G0016702.1 mouse_genomes_project 1 171723965 171758429 - MGP_129S1SvImJ_P0023237 Mael protein_coding protein_coding MGP_129S1SvImJ_T0021260.1 MGP_129S1SvImJ_G0016296.1 mouse_genomes_project 1 92287730 92375902 - MGP_129S1SvImJ_P0021260 Col6a3 protein_coding protein_coding MGP_129S1SvImJ_T0021261.1 MGP_129S1SvImJ_G0016296.1 mouse_genomes_project 1 92287730 92375902 - MGP_129S1SvImJ_P0021261 Col6a3 protein_coding protein_coding MGP_129S1SvImJ_T0021262.1 MGP_129S1SvImJ_G0016296.1 mouse_genomes_project 1 92288695 92375883 - MGP_129S1SvImJ_P0021262 Col6a3 protein_coding protein_coding MGP_129S1SvImJ_T0021263.1 MGP_129S1SvImJ_G0016296.1 mouse_genomes_project 1 92289224 92295066 - Col6a3 protein_coding retained_intron MGP_129S1SvImJ_T0021264.1 MGP_129S1SvImJ_G0016296.1 mouse_genomes_project 1 92313282 92329751 - Col6a3 protein_coding retained_intron MGP_129S1SvImJ_T0021265.1 MGP_129S1SvImJ_G0016296.1 mouse_genomes_project 1 92315705 92316535 - Col6a3 protein_coding retained_intron MGP_129S1SvImJ_T0021266.1 MGP_129S1SvImJ_G0016296.1 mouse_genomes_project 1 92324246 92375859 - MGP_129S1SvImJ_P0021266 Col6a3 protein_coding protein_coding MGP_129S1SvImJ_T0021267.1 MGP_129S1SvImJ_G0016296.1 mouse_genomes_project 1 92343828 92375902 - MGP_129S1SvImJ_P0021267 Col6a3 protein_coding protein_coding MGP_129S1SvImJ_T0023306.1 MGP_129S1SvImJ_G0016723.1 mouse_genomes_project 1 175639153 175658882 - MGP_129S1SvImJ_P0023306 Hsd17b7 protein_coding protein_coding MGP_129S1SvImJ_T0023307.1 MGP_129S1SvImJ_G0016723.1 mouse_genomes_project 1 175642472 175655365 - Hsd17b7 protein_coding processed_transcript MGP_129S1SvImJ_T0023308.1 MGP_129S1SvImJ_G0016723.1 mouse_genomes_project 1 175645096 175658882 - MGP_129S1SvImJ_P0023308 Hsd17b7 protein_coding protein_coding MGP_129S1SvImJ_T0023309.1 MGP_129S1SvImJ_G0016723.1 mouse_genomes_project 1 175649024 175655792 - Hsd17b7 protein_coding processed_transcript MGP_129S1SvImJ_T0000415.1 MGP_129S1SvImJ_G0000357.1 mouse_genomes_project 1 12219085 12223407 + TEC TEC MGP_129S1SvImJ_T0019258.1 MGP_129S1SvImJ_G0015910.1 mouse_genomes_project 1 32893193 32898549 + MGP_129S1SvImJ_P0019258 Prss39 protein_coding protein_coding MGP_129S1SvImJ_T0019259.1 MGP_129S1SvImJ_G0015910.1 mouse_genomes_project 1 32893204 32894917 + MGP_129S1SvImJ_P0019259 Prss39 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0005847.1 MGP_129S1SvImJ_G0004905.1 mouse_genomes_project 1 90807643 90855157 - C030007H22Rik lincRNA lincRNA MGP_129S1SvImJ_T0020776.1 MGP_129S1SvImJ_G0016190.1 mouse_genomes_project 1 76057120 76065041 - protein_coding retained_intron MGP_129S1SvImJ_T0020781.1 MGP_129S1SvImJ_G0016190.1 mouse_genomes_project 1 76063632 76085771 - MGP_129S1SvImJ_P0020781 protein_coding protein_coding MGP_129S1SvImJ_T0020782.1 MGP_129S1SvImJ_G0016190.1 mouse_genomes_project 1 76064658 76065610 - protein_coding retained_intron MGP_129S1SvImJ_T0020783.1 MGP_129S1SvImJ_G0016190.1 mouse_genomes_project 1 76065030 76065886 - protein_coding retained_intron MGP_129S1SvImJ_T0020784.1 MGP_129S1SvImJ_G0016190.1 mouse_genomes_project 1 76068341 76085051 - MGP_129S1SvImJ_P0020784 protein_coding protein_coding MGP_129S1SvImJ_T0020785.1 MGP_129S1SvImJ_G0016190.1 mouse_genomes_project 1 76068656 76070875 - MGP_129S1SvImJ_P0020785 protein_coding protein_coding MGP_129S1SvImJ_T0020786.1 MGP_129S1SvImJ_G0016190.1 mouse_genomes_project 1 76068776 76069619 - protein_coding retained_intron MGP_129S1SvImJ_T0020787.1 MGP_129S1SvImJ_G0016190.1 mouse_genomes_project 1 76069165 76070439 - protein_coding processed_transcript MGP_129S1SvImJ_T0020788.1 MGP_129S1SvImJ_G0016190.1 mouse_genomes_project 1 76070202 76070849 - protein_coding retained_intron MGP_129S1SvImJ_T0020789.1 MGP_129S1SvImJ_G0016190.1 mouse_genomes_project 1 76075732 76085771 - MGP_129S1SvImJ_P0020789 protein_coding protein_coding MGP_129S1SvImJ_T0020790.1 MGP_129S1SvImJ_G0016190.1 mouse_genomes_project 1 76075733 76083090 - protein_coding retained_intron MGP_129S1SvImJ_T0020791.1 MGP_129S1SvImJ_G0016190.1 mouse_genomes_project 1 76081069 76085862 - protein_coding retained_intron MGP_129S1SvImJ_T0020792.1 MGP_129S1SvImJ_G0016190.1 mouse_genomes_project 1 76081069 76085771 - protein_coding retained_intron MGP_129S1SvImJ_T0022230.1 MGP_129S1SvImJ_G0016507.1 mouse_genomes_project 1 138073836 138092890 + MGP_129S1SvImJ_P0022230 Adipor1 protein_coding protein_coding MGP_129S1SvImJ_T0022231.1 MGP_129S1SvImJ_G0016507.1 mouse_genomes_project 1 138073914 138092887 + MGP_129S1SvImJ_P0022231 Adipor1 protein_coding protein_coding MGP_129S1SvImJ_T0022232.1 MGP_129S1SvImJ_G0016507.1 mouse_genomes_project 1 138073929 138074399 + Adipor1 protein_coding processed_transcript MGP_129S1SvImJ_T0022233.1 MGP_129S1SvImJ_G0016507.1 mouse_genomes_project 1 138074022 138085383 + Adipor1 protein_coding retained_intron MGP_129S1SvImJ_T0023387.1 MGP_129S1SvImJ_G0016744.1 mouse_genomes_project 1 176950686 176977260 - MGP_129S1SvImJ_P0023387 Pcp4l1 protein_coding protein_coding MGP_129S1SvImJ_T0099150.1 MGP_129S1SvImJ_G0037217.1 mouse_genomes_project 1 198842202 198842316 - Gm26203 snRNA snRNA MGP_129S1SvImJ_T0019427.1 MGP_129S1SvImJ_G0015940.1 mouse_genomes_project 1 36248003 36359318 - MGP_129S1SvImJ_P0019427 2010300C02Rik protein_coding protein_coding MGP_129S1SvImJ_T0019428.1 MGP_129S1SvImJ_G0015940.1 mouse_genomes_project 1 36248003 36261504 - MGP_129S1SvImJ_P0019428 2010300C02Rik protein_coding protein_coding MGP_129S1SvImJ_T0019429.1 MGP_129S1SvImJ_G0015940.1 mouse_genomes_project 1 36274137 36359028 - MGP_129S1SvImJ_P0019429 2010300C02Rik protein_coding protein_coding MGP_129S1SvImJ_T0020771.1 MGP_129S1SvImJ_G0016189.1 mouse_genomes_project 1 76052327 76057082 - MGP_129S1SvImJ_P0020771 Chpf protein_coding protein_coding MGP_129S1SvImJ_T0020772.1 MGP_129S1SvImJ_G0016189.1 mouse_genomes_project 1 76052333 76057118 - MGP_129S1SvImJ_P0020772 Chpf protein_coding protein_coding MGP_129S1SvImJ_T0020773.1 MGP_129S1SvImJ_G0016189.1 mouse_genomes_project 1 76052334 76056507 - Chpf protein_coding retained_intron MGP_129S1SvImJ_T0020774.1 MGP_129S1SvImJ_G0016189.1 mouse_genomes_project 1 76052334 76056930 - MGP_129S1SvImJ_P0020774 Chpf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020775.1 MGP_129S1SvImJ_G0016189.1 mouse_genomes_project 1 76055267 76056925 - MGP_129S1SvImJ_P0020775 Chpf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021961.1 MGP_129S1SvImJ_G0016450.1 mouse_genomes_project 1 134575322 134580890 + Eif2d protein_coding retained_intron MGP_129S1SvImJ_T0021962.1 MGP_129S1SvImJ_G0016450.1 mouse_genomes_project 1 134575322 134593986 + MGP_129S1SvImJ_P0021962 Eif2d protein_coding protein_coding MGP_129S1SvImJ_T0021963.1 MGP_129S1SvImJ_G0016450.1 mouse_genomes_project 1 134575322 134595225 + MGP_129S1SvImJ_P0021963 Eif2d protein_coding protein_coding MGP_129S1SvImJ_T0021964.1 MGP_129S1SvImJ_G0016450.1 mouse_genomes_project 1 134575322 134602420 + MGP_129S1SvImJ_P0021964 Eif2d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021965.1 MGP_129S1SvImJ_G0016450.1 mouse_genomes_project 1 134575322 134602834 + MGP_129S1SvImJ_P0021965 Eif2d protein_coding protein_coding MGP_129S1SvImJ_T0021966.1 MGP_129S1SvImJ_G0016450.1 mouse_genomes_project 1 134575322 134596599 + MGP_129S1SvImJ_P0021966 Eif2d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021967.1 MGP_129S1SvImJ_G0016450.1 mouse_genomes_project 1 134575322 134610086 + MGP_129S1SvImJ_P0021967 Eif2d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021968.1 MGP_129S1SvImJ_G0016450.1 mouse_genomes_project 1 134588126 134593257 + Eif2d protein_coding processed_transcript MGP_129S1SvImJ_T0019630.1 MGP_129S1SvImJ_G0015984.1 mouse_genomes_project 1 43047063 43057639 - MGP_129S1SvImJ_P0019630 Mettl21c protein_coding protein_coding MGP_129S1SvImJ_T0019631.1 MGP_129S1SvImJ_G0015984.1 mouse_genomes_project 1 43047590 43055101 - Mettl21c protein_coding processed_transcript MGP_129S1SvImJ_T0019632.1 MGP_129S1SvImJ_G0015984.1 mouse_genomes_project 1 43048165 43057667 - Mettl21c protein_coding retained_intron MGP_129S1SvImJ_T0000649.1 MGP_129S1SvImJ_G0000588.1 mouse_genomes_project 1 133872427 133873975 + TEC TEC MGP_129S1SvImJ_T0099075.1 MGP_129S1SvImJ_G0037142.1 mouse_genomes_project 1 32357743 32357836 - Gm23792 snRNA snRNA MGP_129S1SvImJ_T0009515.1 MGP_129S1SvImJ_G0007631.1 mouse_genomes_project 1 75514077 75514141 - Mir375 miRNA miRNA MGP_129S1SvImJ_T0019951.1 MGP_129S1SvImJ_G0016044.1 mouse_genomes_project 1 57827262 57859354 + MGP_129S1SvImJ_P0019951 Sgol2a protein_coding protein_coding MGP_129S1SvImJ_T0019952.1 MGP_129S1SvImJ_G0016044.1 mouse_genomes_project 1 57856170 57859353 + Sgol2a protein_coding retained_intron MGP_129S1SvImJ_T0005922.1 MGP_129S1SvImJ_G0004967.1 mouse_genomes_project 1 135749767 135755442 - Gm29630 lincRNA lincRNA MGP_129S1SvImJ_T0023827.1 MGP_129S1SvImJ_G0016863.1 mouse_genomes_project 1 186126641 186187299 - MGP_129S1SvImJ_P0023827 Ahctf1 protein_coding protein_coding MGP_129S1SvImJ_T0023828.1 MGP_129S1SvImJ_G0016863.1 mouse_genomes_project 1 186127084 186134157 - MGP_129S1SvImJ_P0023828 Ahctf1 protein_coding protein_coding MGP_129S1SvImJ_T0023829.1 MGP_129S1SvImJ_G0016863.1 mouse_genomes_project 1 186127838 186135328 - Ahctf1 protein_coding retained_intron MGP_129S1SvImJ_T0023830.1 MGP_129S1SvImJ_G0016863.1 mouse_genomes_project 1 186135446 186139737 - MGP_129S1SvImJ_P0023830 Ahctf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023831.1 MGP_129S1SvImJ_G0016863.1 mouse_genomes_project 1 186142010 186147763 - MGP_129S1SvImJ_P0023831 Ahctf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023832.1 MGP_129S1SvImJ_G0016863.1 mouse_genomes_project 1 186150150 186152774 - MGP_129S1SvImJ_P0023832 Ahctf1 protein_coding protein_coding MGP_129S1SvImJ_T0023833.1 MGP_129S1SvImJ_G0016863.1 mouse_genomes_project 1 186175496 186178687 - Ahctf1 protein_coding retained_intron MGP_129S1SvImJ_T0023834.1 MGP_129S1SvImJ_G0016863.1 mouse_genomes_project 1 186182424 186185691 - Ahctf1 protein_coding retained_intron MGP_129S1SvImJ_T0023835.1 MGP_129S1SvImJ_G0016863.1 mouse_genomes_project 1 186182430 186187225 - Ahctf1 protein_coding retained_intron MGP_129S1SvImJ_T0006065.1 MGP_129S1SvImJ_G0005078.1 mouse_genomes_project 1 194258875 194273753 + Gm37896 lincRNA lincRNA MGP_129S1SvImJ_T0012095.1 MGP_129S1SvImJ_G0010184.1 mouse_genomes_project 1 65693098 65693406 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009539.1 MGP_129S1SvImJ_G0007655.1 mouse_genomes_project 1 121673973 121674054 + Mir6346 miRNA miRNA MGP_129S1SvImJ_T0011971.1 MGP_129S1SvImJ_G0010060.1 mouse_genomes_project 1 31665693 31666606 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002798.1 MGP_129S1SvImJ_G0002661.1 mouse_genomes_project 1 35725090 35726082 - Gm37020 antisense antisense MGP_129S1SvImJ_T0012071.1 MGP_129S1SvImJ_G0010160.1 mouse_genomes_project 1 60623212 60623629 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021415.1 MGP_129S1SvImJ_G0016330.1 mouse_genomes_project 1 94542779 94556292 + MGP_129S1SvImJ_P0021415 Capn10 protein_coding protein_coding MGP_129S1SvImJ_T0021416.1 MGP_129S1SvImJ_G0016330.1 mouse_genomes_project 1 94543169 94549371 + MGP_129S1SvImJ_P0021416 Capn10 protein_coding protein_coding MGP_129S1SvImJ_T0021417.1 MGP_129S1SvImJ_G0016330.1 mouse_genomes_project 1 94543236 94556280 + MGP_129S1SvImJ_P0021417 Capn10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021418.1 MGP_129S1SvImJ_G0016330.1 mouse_genomes_project 1 94548857 94553454 + MGP_129S1SvImJ_P0021418 Capn10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021419.1 MGP_129S1SvImJ_G0016330.1 mouse_genomes_project 1 94551054 94552095 + Capn10 protein_coding retained_intron MGP_129S1SvImJ_T0021420.1 MGP_129S1SvImJ_G0016330.1 mouse_genomes_project 1 94554903 94555306 + Capn10 protein_coding processed_transcript MGP_129S1SvImJ_T0021421.1 MGP_129S1SvImJ_G0016330.1 mouse_genomes_project 1 94555235 94555941 + Capn10 protein_coding retained_intron MGP_129S1SvImJ_T0098775.1 MGP_129S1SvImJ_G0036860.1 mouse_genomes_project 1 51350584 51351861 - Gm29453 sense_intronic sense_intronic MGP_129S1SvImJ_T0000446.1 MGP_129S1SvImJ_G0000386.1 mouse_genomes_project 1 23694731 23698280 - TEC TEC MGP_129S1SvImJ_T0023811.1 MGP_129S1SvImJ_G0016859.1 mouse_genomes_project 1 185893686 185913997 - MGP_129S1SvImJ_P0023811 protein_coding protein_coding MGP_129S1SvImJ_T0023812.1 MGP_129S1SvImJ_G0016859.1 mouse_genomes_project 1 185894960 185913732 - MGP_129S1SvImJ_P0023812 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0023813.1 MGP_129S1SvImJ_G0016859.1 mouse_genomes_project 1 185895028 185901072 - protein_coding processed_transcript MGP_129S1SvImJ_T0023814.1 MGP_129S1SvImJ_G0016859.1 mouse_genomes_project 1 185897065 185913947 - protein_coding processed_transcript MGP_129S1SvImJ_T0023815.1 MGP_129S1SvImJ_G0016859.1 mouse_genomes_project 1 185900913 185913508 - protein_coding processed_transcript MGP_129S1SvImJ_T0019333.1 MGP_129S1SvImJ_G0015925.1 mouse_genomes_project 1 35043716 35060068 + MGP_129S1SvImJ_P0019333 Cnnm3 protein_coding protein_coding MGP_129S1SvImJ_T0019334.1 MGP_129S1SvImJ_G0015925.1 mouse_genomes_project 1 35043716 35060068 + MGP_129S1SvImJ_P0019334 Cnnm3 protein_coding protein_coding MGP_129S1SvImJ_T0019335.1 MGP_129S1SvImJ_G0015925.1 mouse_genomes_project 1 35044946 35052266 + Cnnm3 protein_coding retained_intron MGP_129S1SvImJ_T0019336.1 MGP_129S1SvImJ_G0015925.1 mouse_genomes_project 1 35050399 35051405 + Cnnm3 protein_coding retained_intron MGP_129S1SvImJ_T0019337.1 MGP_129S1SvImJ_G0015925.1 mouse_genomes_project 1 35052591 35057431 + Cnnm3 protein_coding retained_intron MGP_129S1SvImJ_T0012325.1 MGP_129S1SvImJ_G0010414.1 mouse_genomes_project 1 167052932 167054522 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011895.1 MGP_129S1SvImJ_G0009984.1 mouse_genomes_project 1 4988735 4990236 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020691.1 MGP_129S1SvImJ_G0016179.1 mouse_genomes_project 1 75778357 75783424 - MGP_129S1SvImJ_P0020691 Tuba4a protein_coding protein_coding MGP_129S1SvImJ_T0020692.1 MGP_129S1SvImJ_G0016179.1 mouse_genomes_project 1 75779101 75782754 - MGP_129S1SvImJ_P0020692 Tuba4a protein_coding protein_coding MGP_129S1SvImJ_T0020693.1 MGP_129S1SvImJ_G0016179.1 mouse_genomes_project 1 75779741 75781564 - MGP_129S1SvImJ_P0020693 Tuba4a protein_coding protein_coding MGP_129S1SvImJ_T0020694.1 MGP_129S1SvImJ_G0016179.1 mouse_genomes_project 1 75780085 75781544 - MGP_129S1SvImJ_P0020694 Tuba4a protein_coding protein_coding MGP_129S1SvImJ_T0020695.1 MGP_129S1SvImJ_G0016179.1 mouse_genomes_project 1 75780564 75783373 - Tuba4a protein_coding retained_intron MGP_129S1SvImJ_T0020696.1 MGP_129S1SvImJ_G0016179.1 mouse_genomes_project 1 75780986 75783995 - MGP_129S1SvImJ_P0020696 Tuba4a protein_coding protein_coding MGP_129S1SvImJ_T0020697.1 MGP_129S1SvImJ_G0016179.1 mouse_genomes_project 1 75781018 75783018 - MGP_129S1SvImJ_P0020697 Tuba4a protein_coding protein_coding MGP_129S1SvImJ_T0020698.1 MGP_129S1SvImJ_G0016179.1 mouse_genomes_project 1 75781042 75783018 - MGP_129S1SvImJ_P0020698 Tuba4a protein_coding protein_coding MGP_129S1SvImJ_T0020923.1 MGP_129S1SvImJ_G0016219.1 mouse_genomes_project 1 83677745 83689557 - MGP_129S1SvImJ_P0020923 Tm4sf20 protein_coding protein_coding MGP_129S1SvImJ_T0020924.1 MGP_129S1SvImJ_G0016219.1 mouse_genomes_project 1 83678498 83689557 - Tm4sf20 protein_coding processed_transcript MGP_129S1SvImJ_T0005964.1 MGP_129S1SvImJ_G0005002.1 mouse_genomes_project 1 158913858 158998202 - A830008E24Rik lincRNA lincRNA MGP_129S1SvImJ_T0005965.1 MGP_129S1SvImJ_G0005002.1 mouse_genomes_project 1 158924352 159000000 - A830008E24Rik lincRNA lincRNA MGP_129S1SvImJ_T0000458.1 MGP_129S1SvImJ_G0000398.1 mouse_genomes_project 1 31313888 31318894 - TEC TEC MGP_129S1SvImJ_T0023711.1 MGP_129S1SvImJ_G0016837.1 mouse_genomes_project 1 181720334 181761455 + MGP_129S1SvImJ_P0023711 Kmo protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023712.1 MGP_129S1SvImJ_G0016837.1 mouse_genomes_project 1 181732112 181762346 + MGP_129S1SvImJ_P0023712 Kmo protein_coding protein_coding MGP_129S1SvImJ_T0023713.1 MGP_129S1SvImJ_G0016837.1 mouse_genomes_project 1 181732117 181755558 + Kmo protein_coding retained_intron MGP_129S1SvImJ_T0023714.1 MGP_129S1SvImJ_G0016837.1 mouse_genomes_project 1 181732142 181737455 + Kmo protein_coding processed_transcript MGP_129S1SvImJ_T0023715.1 MGP_129S1SvImJ_G0016837.1 mouse_genomes_project 1 181732296 181763560 + MGP_129S1SvImJ_P0023715 Kmo protein_coding protein_coding MGP_129S1SvImJ_T0023716.1 MGP_129S1SvImJ_G0016837.1 mouse_genomes_project 1 181732355 181749163 + Kmo protein_coding processed_transcript MGP_129S1SvImJ_T0019806.1 MGP_129S1SvImJ_G0016014.1 mouse_genomes_project 1 52589064 52596751 + MGP_129S1SvImJ_P0019806 Mstn protein_coding protein_coding MGP_129S1SvImJ_T0019807.1 MGP_129S1SvImJ_G0016014.1 mouse_genomes_project 1 52589081 52596717 + MGP_129S1SvImJ_P0019807 Mstn protein_coding protein_coding MGP_129S1SvImJ_T0005981.1 MGP_129S1SvImJ_G0005013.1 mouse_genomes_project 1 166035367 166038799 + Gm37083 lincRNA lincRNA MGP_129S1SvImJ_T0019694.1 MGP_129S1SvImJ_G0015996.1 mouse_genomes_project 1 44992734 45010202 - MGP_129S1SvImJ_P0019694 Slc40a1 protein_coding protein_coding MGP_129S1SvImJ_T0019695.1 MGP_129S1SvImJ_G0015996.1 mouse_genomes_project 1 44999909 45010229 - Slc40a1 protein_coding retained_intron MGP_129S1SvImJ_T0019696.1 MGP_129S1SvImJ_G0015996.1 mouse_genomes_project 1 45003649 45007929 - Slc40a1 protein_coding processed_transcript MGP_129S1SvImJ_T0019697.1 MGP_129S1SvImJ_G0015996.1 mouse_genomes_project 1 45003657 45009882 - Slc40a1 protein_coding processed_transcript MGP_129S1SvImJ_T0019698.1 MGP_129S1SvImJ_G0015996.1 mouse_genomes_project 1 45005948 45011139 - MGP_129S1SvImJ_P0019698 Slc40a1 protein_coding protein_coding MGP_129S1SvImJ_T0019699.1 MGP_129S1SvImJ_G0015996.1 mouse_genomes_project 1 45005948 45011139 - MGP_129S1SvImJ_P0019699 Slc40a1 protein_coding protein_coding MGP_129S1SvImJ_T0019700.1 MGP_129S1SvImJ_G0015996.1 mouse_genomes_project 1 45005948 45011139 - MGP_129S1SvImJ_P0019700 Slc40a1 protein_coding protein_coding MGP_129S1SvImJ_T0019701.1 MGP_129S1SvImJ_G0015996.1 mouse_genomes_project 1 45008351 45011143 - Slc40a1 protein_coding retained_intron MGP_129S1SvImJ_T0101572.1 MGP_129S1SvImJ_G0039639.1 mouse_genomes_project 1 32804821 32805652 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101573.1 MGP_129S1SvImJ_G0039639.1 mouse_genomes_project 1 32805536 32807343 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0012373.1 MGP_129S1SvImJ_G0010462.1 mouse_genomes_project 1 189019310 189020303 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023855.1 MGP_129S1SvImJ_G0016866.1 mouse_genomes_project 1 186579895 186608143 - MGP_129S1SvImJ_P0023855 Coq8a protein_coding protein_coding MGP_129S1SvImJ_T0023856.1 MGP_129S1SvImJ_G0016866.1 mouse_genomes_project 1 186579895 186610678 - MGP_129S1SvImJ_P0023856 Coq8a protein_coding protein_coding MGP_129S1SvImJ_T0023857.1 MGP_129S1SvImJ_G0016866.1 mouse_genomes_project 1 186581676 186610596 - MGP_129S1SvImJ_P0023857 Coq8a protein_coding protein_coding MGP_129S1SvImJ_T0023858.1 MGP_129S1SvImJ_G0016866.1 mouse_genomes_project 1 186581808 186593289 - MGP_129S1SvImJ_P0023858 Coq8a protein_coding protein_coding MGP_129S1SvImJ_T0023859.1 MGP_129S1SvImJ_G0016866.1 mouse_genomes_project 1 186582048 186610639 - MGP_129S1SvImJ_P0023859 Coq8a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023860.1 MGP_129S1SvImJ_G0016866.1 mouse_genomes_project 1 186584780 186610619 - MGP_129S1SvImJ_P0023860 Coq8a protein_coding protein_coding MGP_129S1SvImJ_T0023861.1 MGP_129S1SvImJ_G0016866.1 mouse_genomes_project 1 186584787 186596755 - MGP_129S1SvImJ_P0023861 Coq8a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023862.1 MGP_129S1SvImJ_G0016866.1 mouse_genomes_project 1 186585862 186593580 - Coq8a protein_coding retained_intron MGP_129S1SvImJ_T0023863.1 MGP_129S1SvImJ_G0016866.1 mouse_genomes_project 1 186593664 186610619 - MGP_129S1SvImJ_P0023863 Coq8a protein_coding protein_coding MGP_129S1SvImJ_T0023864.1 MGP_129S1SvImJ_G0016866.1 mouse_genomes_project 1 186593729 186608141 - MGP_129S1SvImJ_P0023864 Coq8a protein_coding protein_coding MGP_129S1SvImJ_T0023865.1 MGP_129S1SvImJ_G0016866.1 mouse_genomes_project 1 186593766 186610733 - MGP_129S1SvImJ_P0023865 Coq8a protein_coding protein_coding MGP_129S1SvImJ_T0023866.1 MGP_129S1SvImJ_G0016866.1 mouse_genomes_project 1 186593793 186597458 - MGP_129S1SvImJ_P0023866 Coq8a protein_coding protein_coding MGP_129S1SvImJ_T0023867.1 MGP_129S1SvImJ_G0016866.1 mouse_genomes_project 1 186593799 186610630 - MGP_129S1SvImJ_P0023867 Coq8a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023868.1 MGP_129S1SvImJ_G0016866.1 mouse_genomes_project 1 186593802 186608320 - MGP_129S1SvImJ_P0023868 Coq8a protein_coding protein_coding MGP_129S1SvImJ_T0023869.1 MGP_129S1SvImJ_G0016866.1 mouse_genomes_project 1 186593853 186610630 - MGP_129S1SvImJ_P0023869 Coq8a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023870.1 MGP_129S1SvImJ_G0016866.1 mouse_genomes_project 1 186593905 186615240 - MGP_129S1SvImJ_P0023870 Coq8a protein_coding protein_coding MGP_129S1SvImJ_T0023871.1 MGP_129S1SvImJ_G0016866.1 mouse_genomes_project 1 186596830 186610560 - MGP_129S1SvImJ_P0023871 Coq8a protein_coding protein_coding MGP_129S1SvImJ_T0023625.1 MGP_129S1SvImJ_G0016793.1 mouse_genomes_project 1 178455486 178466362 - MGP_129S1SvImJ_P0023625 Slamf8 protein_coding protein_coding MGP_129S1SvImJ_T0023626.1 MGP_129S1SvImJ_G0016793.1 mouse_genomes_project 1 178464772 178466243 - Slamf8 protein_coding retained_intron MGP_129S1SvImJ_T0000476.1 MGP_129S1SvImJ_G0000415.1 mouse_genomes_project 1 36113497 36116251 - TEC TEC MGP_129S1SvImJ_T0019343.1 MGP_129S1SvImJ_G0015928.1 mouse_genomes_project 1 35087091 35096802 - MGP_129S1SvImJ_P0019343 Sema4c protein_coding protein_coding MGP_129S1SvImJ_T0019344.1 MGP_129S1SvImJ_G0015928.1 mouse_genomes_project 1 35087094 35096802 - MGP_129S1SvImJ_P0019344 Sema4c protein_coding protein_coding MGP_129S1SvImJ_T0019345.1 MGP_129S1SvImJ_G0015928.1 mouse_genomes_project 1 35087094 35095979 - MGP_129S1SvImJ_P0019345 Sema4c protein_coding protein_coding MGP_129S1SvImJ_T0019346.1 MGP_129S1SvImJ_G0015928.1 mouse_genomes_project 1 35087094 35096010 - MGP_129S1SvImJ_P0019346 Sema4c protein_coding protein_coding MGP_129S1SvImJ_T0019347.1 MGP_129S1SvImJ_G0015928.1 mouse_genomes_project 1 35090178 35091347 - Sema4c protein_coding retained_intron MGP_129S1SvImJ_T0019348.1 MGP_129S1SvImJ_G0015928.1 mouse_genomes_project 1 35091676 35092683 - Sema4c protein_coding retained_intron MGP_129S1SvImJ_T0019349.1 MGP_129S1SvImJ_G0015928.1 mouse_genomes_project 1 35092852 35095987 - MGP_129S1SvImJ_P0019349 Sema4c protein_coding protein_coding MGP_129S1SvImJ_T0019350.1 MGP_129S1SvImJ_G0015928.1 mouse_genomes_project 1 35094384 35096703 - MGP_129S1SvImJ_P0019350 Sema4c protein_coding protein_coding MGP_129S1SvImJ_T0006080.1 MGP_129S1SvImJ_G0005091.1 mouse_genomes_project 1 200613838 200616775 - 4631405K08Rik lincRNA lincRNA MGP_129S1SvImJ_T0020963.1 MGP_129S1SvImJ_G0016228.1 mouse_genomes_project 1 85757916 85886098 - MGP_129S1SvImJ_P0020963 Trip12 protein_coding protein_coding MGP_129S1SvImJ_T0020964.1 MGP_129S1SvImJ_G0016228.1 mouse_genomes_project 1 85757916 85884886 - MGP_129S1SvImJ_P0020964 Trip12 protein_coding protein_coding MGP_129S1SvImJ_T0020965.1 MGP_129S1SvImJ_G0016228.1 mouse_genomes_project 1 85760991 85786040 - MGP_129S1SvImJ_P0020965 Trip12 protein_coding protein_coding MGP_129S1SvImJ_T0020966.1 MGP_129S1SvImJ_G0016228.1 mouse_genomes_project 1 85760991 85884870 - MGP_129S1SvImJ_P0020966 Trip12 protein_coding protein_coding MGP_129S1SvImJ_T0020967.1 MGP_129S1SvImJ_G0016228.1 mouse_genomes_project 1 85761304 85768492 - MGP_129S1SvImJ_P0020967 Trip12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020968.1 MGP_129S1SvImJ_G0016228.1 mouse_genomes_project 1 85762937 85765665 - Trip12 protein_coding retained_intron MGP_129S1SvImJ_T0020969.1 MGP_129S1SvImJ_G0016228.1 mouse_genomes_project 1 85765395 85768563 - Trip12 protein_coding retained_intron MGP_129S1SvImJ_T0020970.1 MGP_129S1SvImJ_G0016228.1 mouse_genomes_project 1 85781518 85791166 - MGP_129S1SvImJ_P0020970 Trip12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020971.1 MGP_129S1SvImJ_G0016228.1 mouse_genomes_project 1 85785920 85787306 - Trip12 protein_coding retained_intron MGP_129S1SvImJ_T0020972.1 MGP_129S1SvImJ_G0016228.1 mouse_genomes_project 1 85785981 85884893 - MGP_129S1SvImJ_P0020972 Trip12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020973.1 MGP_129S1SvImJ_G0016228.1 mouse_genomes_project 1 85791164 85884886 - MGP_129S1SvImJ_P0020973 Trip12 protein_coding protein_coding MGP_129S1SvImJ_T0020974.1 MGP_129S1SvImJ_G0016228.1 mouse_genomes_project 1 85793410 85796946 - Trip12 protein_coding retained_intron MGP_129S1SvImJ_T0020975.1 MGP_129S1SvImJ_G0016228.1 mouse_genomes_project 1 85804515 85805280 - Trip12 protein_coding retained_intron MGP_129S1SvImJ_T0020976.1 MGP_129S1SvImJ_G0016228.1 mouse_genomes_project 1 85804551 85831936 - MGP_129S1SvImJ_P0020976 Trip12 protein_coding protein_coding MGP_129S1SvImJ_T0020977.1 MGP_129S1SvImJ_G0016228.1 mouse_genomes_project 1 85820730 85822681 - Trip12 protein_coding retained_intron MGP_129S1SvImJ_T0020978.1 MGP_129S1SvImJ_G0016228.1 mouse_genomes_project 1 85821196 85884883 - MGP_129S1SvImJ_P0020978 Trip12 protein_coding protein_coding MGP_129S1SvImJ_T0020979.1 MGP_129S1SvImJ_G0016228.1 mouse_genomes_project 1 85832371 85885848 - MGP_129S1SvImJ_P0020979 Trip12 protein_coding protein_coding MGP_129S1SvImJ_T0020980.1 MGP_129S1SvImJ_G0016228.1 mouse_genomes_project 1 85832615 85884509 - MGP_129S1SvImJ_P0020980 Trip12 protein_coding protein_coding MGP_129S1SvImJ_T0020566.1 MGP_129S1SvImJ_G0016158.1 mouse_genomes_project 1 75215356 75248816 + MGP_129S1SvImJ_P0020566 Stk36 protein_coding protein_coding MGP_129S1SvImJ_T0020567.1 MGP_129S1SvImJ_G0016158.1 mouse_genomes_project 1 75215391 75248813 + Stk36 protein_coding retained_intron MGP_129S1SvImJ_T0020568.1 MGP_129S1SvImJ_G0016158.1 mouse_genomes_project 1 75215414 75246022 + MGP_129S1SvImJ_P0020568 Stk36 protein_coding protein_coding MGP_129S1SvImJ_T0020569.1 MGP_129S1SvImJ_G0016158.1 mouse_genomes_project 1 75215425 75219435 + MGP_129S1SvImJ_P0020569 Stk36 protein_coding protein_coding MGP_129S1SvImJ_T0020570.1 MGP_129S1SvImJ_G0016158.1 mouse_genomes_project 1 75215550 75247965 + MGP_129S1SvImJ_P0020570 Stk36 protein_coding protein_coding MGP_129S1SvImJ_T0020571.1 MGP_129S1SvImJ_G0016158.1 mouse_genomes_project 1 75217119 75222322 + MGP_129S1SvImJ_P0020571 Stk36 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020572.1 MGP_129S1SvImJ_G0016158.1 mouse_genomes_project 1 75234227 75237787 + Stk36 protein_coding retained_intron MGP_129S1SvImJ_T0020573.1 MGP_129S1SvImJ_G0016158.1 mouse_genomes_project 1 75234704 75248008 + Stk36 protein_coding processed_transcript MGP_129S1SvImJ_T0020574.1 MGP_129S1SvImJ_G0016158.1 mouse_genomes_project 1 75238340 75248816 + Stk36 protein_coding retained_intron MGP_129S1SvImJ_T0011985.1 MGP_129S1SvImJ_G0010074.1 mouse_genomes_project 1 33364545 33366682 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100316.1 MGP_129S1SvImJ_G0038383.1 mouse_genomes_project 1 17130509 17130574 - Gm24633 snoRNA snoRNA MGP_129S1SvImJ_T0020851.1 MGP_129S1SvImJ_G0016205.1 mouse_genomes_project 1 80383184 80472372 - MGP_129S1SvImJ_P0020851 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020852.1 MGP_129S1SvImJ_G0016205.1 mouse_genomes_project 1 80383525 80472375 - MGP_129S1SvImJ_P0020852 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019043.1 MGP_129S1SvImJ_G0015862.1 mouse_genomes_project 1 15149271 15186648 + MGP_129S1SvImJ_P0019043 Pi15 protein_coding protein_coding MGP_129S1SvImJ_T0021937.1 MGP_129S1SvImJ_G0016441.1 mouse_genomes_project 1 134202447 134216262 + MGP_129S1SvImJ_P0021937 Fcamr protein_coding protein_coding MGP_129S1SvImJ_T0021938.1 MGP_129S1SvImJ_G0016441.1 mouse_genomes_project 1 134202447 134216230 + MGP_129S1SvImJ_P0021938 Fcamr protein_coding protein_coding MGP_129S1SvImJ_T0000710.1 MGP_129S1SvImJ_G0000647.1 mouse_genomes_project 1 158267148 158267968 + TEC TEC MGP_129S1SvImJ_T0024108.1 MGP_129S1SvImJ_G0016920.1 mouse_genomes_project 1 193519326 193545605 - MGP_129S1SvImJ_P0024108 Rrp15 protein_coding protein_coding MGP_129S1SvImJ_T0024109.1 MGP_129S1SvImJ_G0016920.1 mouse_genomes_project 1 193519440 193545572 - Rrp15 protein_coding retained_intron MGP_129S1SvImJ_T0000659.1 MGP_129S1SvImJ_G0000597.1 mouse_genomes_project 1 137395479 137398684 - TEC TEC MGP_129S1SvImJ_T0019611.1 MGP_129S1SvImJ_G0015982.1 mouse_genomes_project 1 42775972 42860068 - MGP_129S1SvImJ_P0019611 Uxs1 protein_coding protein_coding MGP_129S1SvImJ_T0019612.1 MGP_129S1SvImJ_G0015982.1 mouse_genomes_project 1 42778521 42860009 - MGP_129S1SvImJ_P0019612 Uxs1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019613.1 MGP_129S1SvImJ_G0015982.1 mouse_genomes_project 1 42779239 42859976 - MGP_129S1SvImJ_P0019613 Uxs1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0019614.1 MGP_129S1SvImJ_G0015982.1 mouse_genomes_project 1 42795718 42860068 - MGP_129S1SvImJ_P0019614 Uxs1 protein_coding protein_coding MGP_129S1SvImJ_T0019615.1 MGP_129S1SvImJ_G0015982.1 mouse_genomes_project 1 42802446 42859289 - Uxs1 protein_coding processed_transcript MGP_129S1SvImJ_T0019616.1 MGP_129S1SvImJ_G0015982.1 mouse_genomes_project 1 42802446 42860018 - MGP_129S1SvImJ_P0019616 Uxs1 protein_coding protein_coding MGP_129S1SvImJ_T0019617.1 MGP_129S1SvImJ_G0015982.1 mouse_genomes_project 1 42805582 42860030 - Uxs1 protein_coding processed_transcript MGP_129S1SvImJ_T0019618.1 MGP_129S1SvImJ_G0015982.1 mouse_genomes_project 1 42810650 42860030 - MGP_129S1SvImJ_P0019618 Uxs1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019619.1 MGP_129S1SvImJ_G0015982.1 mouse_genomes_project 1 42822563 42860042 - MGP_129S1SvImJ_P0019619 Uxs1 protein_coding protein_coding MGP_129S1SvImJ_T0019365.1 MGP_129S1SvImJ_G0015931.1 mouse_genomes_project 1 35245354 35262693 - Actr1b protein_coding retained_intron MGP_129S1SvImJ_T0019366.1 MGP_129S1SvImJ_G0015931.1 mouse_genomes_project 1 35245445 35262424 - MGP_129S1SvImJ_P0019366 Actr1b protein_coding protein_coding MGP_129S1SvImJ_T0019367.1 MGP_129S1SvImJ_G0015931.1 mouse_genomes_project 1 35245466 35267108 - MGP_129S1SvImJ_P0019367 Actr1b protein_coding protein_coding MGP_129S1SvImJ_T0019368.1 MGP_129S1SvImJ_G0015931.1 mouse_genomes_project 1 35250859 35262754 - MGP_129S1SvImJ_P0019368 Actr1b protein_coding protein_coding MGP_129S1SvImJ_T0019369.1 MGP_129S1SvImJ_G0015931.1 mouse_genomes_project 1 35253958 35254397 - Actr1b protein_coding retained_intron MGP_129S1SvImJ_T0019370.1 MGP_129S1SvImJ_G0015931.1 mouse_genomes_project 1 35255227 35259913 - Actr1b protein_coding retained_intron MGP_129S1SvImJ_T0019371.1 MGP_129S1SvImJ_G0015931.1 mouse_genomes_project 1 35259293 35262665 - Actr1b protein_coding processed_transcript MGP_129S1SvImJ_T0002908.1 MGP_129S1SvImJ_G0002744.1 mouse_genomes_project 1 136561230 136579520 - Gm28609 antisense antisense MGP_129S1SvImJ_T0012202.1 MGP_129S1SvImJ_G0010291.1 mouse_genomes_project 1 112880813 112881635 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023383.1 MGP_129S1SvImJ_G0016743.1 mouse_genomes_project 1 176928250 176938671 + MGP_129S1SvImJ_P0023383 Mpz protein_coding protein_coding MGP_129S1SvImJ_T0023384.1 MGP_129S1SvImJ_G0016743.1 mouse_genomes_project 1 176933041 176938032 + MGP_129S1SvImJ_P0023384 Mpz protein_coding protein_coding MGP_129S1SvImJ_T0023385.1 MGP_129S1SvImJ_G0016743.1 mouse_genomes_project 1 176937118 176937755 + Mpz protein_coding processed_transcript MGP_129S1SvImJ_T0023386.1 MGP_129S1SvImJ_G0016743.1 mouse_genomes_project 1 176937227 176937770 + Mpz protein_coding processed_transcript MGP_129S1SvImJ_T0002952.1 MGP_129S1SvImJ_G0002778.1 mouse_genomes_project 1 167542323 167550876 + Dnm3os antisense antisense MGP_129S1SvImJ_T0002953.1 MGP_129S1SvImJ_G0002778.1 mouse_genomes_project 1 167542323 167550878 + Dnm3os antisense antisense MGP_129S1SvImJ_T0002954.1 MGP_129S1SvImJ_G0002778.1 mouse_genomes_project 1 167542364 167547441 + Dnm3os antisense antisense MGP_129S1SvImJ_T0021198.1 MGP_129S1SvImJ_G0016273.1 mouse_genomes_project 1 89418081 89619897 + MGP_129S1SvImJ_P0021198 protein_coding protein_coding MGP_129S1SvImJ_T0021199.1 MGP_129S1SvImJ_G0016273.1 mouse_genomes_project 1 89418104 89628384 + MGP_129S1SvImJ_P0021199 protein_coding protein_coding MGP_129S1SvImJ_T0021200.1 MGP_129S1SvImJ_G0016273.1 mouse_genomes_project 1 89418165 89619829 + MGP_129S1SvImJ_P0021200 protein_coding protein_coding MGP_129S1SvImJ_T0012307.1 MGP_129S1SvImJ_G0010396.1 mouse_genomes_project 1 158460185 158461086 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011952.1 MGP_129S1SvImJ_G0010041.1 mouse_genomes_project 1 23907001 23909351 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009477.1 MGP_129S1SvImJ_G0007593.1 mouse_genomes_project 1 9740744 9740865 + Mir6341 miRNA miRNA MGP_129S1SvImJ_T0002963.1 MGP_129S1SvImJ_G0002786.1 mouse_genomes_project 1 171903606 171904261 - Gm15853 antisense antisense MGP_129S1SvImJ_T0020308.1 MGP_129S1SvImJ_G0016111.1 mouse_genomes_project 1 66195695 66198536 + MGP_129S1SvImJ_P0020308 Crygf protein_coding protein_coding MGP_129S1SvImJ_T0020309.1 MGP_129S1SvImJ_G0016111.1 mouse_genomes_project 1 66195713 66198535 + MGP_129S1SvImJ_P0020309 Crygf protein_coding protein_coding MGP_129S1SvImJ_T0019664.1 MGP_129S1SvImJ_G0015990.1 mouse_genomes_project 1 43246529 43261638 - MGP_129S1SvImJ_P0019664 Mettl21e protein_coding protein_coding MGP_129S1SvImJ_T0019665.1 MGP_129S1SvImJ_G0015990.1 mouse_genomes_project 1 43248944 43261590 - Mettl21e protein_coding retained_intron MGP_129S1SvImJ_T0099079.1 MGP_129S1SvImJ_G0037146.1 mouse_genomes_project 1 51951334 51951443 - Gm23460 snRNA snRNA MGP_129S1SvImJ_T0021946.1 MGP_129S1SvImJ_G0016444.1 mouse_genomes_project 1 134287745 134293126 - MGP_129S1SvImJ_P0021946 Il24 protein_coding protein_coding MGP_129S1SvImJ_T0021947.1 MGP_129S1SvImJ_G0016444.1 mouse_genomes_project 1 134287745 134291668 - MGP_129S1SvImJ_P0021947 Il24 protein_coding protein_coding MGP_129S1SvImJ_T0021948.1 MGP_129S1SvImJ_G0016444.1 mouse_genomes_project 1 134288126 134293011 - MGP_129S1SvImJ_P0021948 Il24 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021949.1 MGP_129S1SvImJ_G0016444.1 mouse_genomes_project 1 134290458 134293085 - MGP_129S1SvImJ_P0021949 Il24 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0012140.1 MGP_129S1SvImJ_G0010229.1 mouse_genomes_project 1 87574410 87574740 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005782.1 MGP_129S1SvImJ_G0004855.1 mouse_genomes_project 1 64203634 64207101 + Gm26649 lincRNA lincRNA MGP_129S1SvImJ_T0000544.1 MGP_129S1SvImJ_G0000483.1 mouse_genomes_project 1 74895476 74898342 + TEC TEC MGP_129S1SvImJ_T0000738.1 MGP_129S1SvImJ_G0000675.1 mouse_genomes_project 1 165828083 165831736 - TEC TEC MGP_129S1SvImJ_T0022274.1 MGP_129S1SvImJ_G0016517.1 mouse_genomes_project 1 138883594 138894393 + MGP_129S1SvImJ_P0022274 Arl8a protein_coding protein_coding MGP_129S1SvImJ_T0022275.1 MGP_129S1SvImJ_G0016517.1 mouse_genomes_project 1 138884439 138894393 + MGP_129S1SvImJ_P0022275 Arl8a protein_coding protein_coding MGP_129S1SvImJ_T0022276.1 MGP_129S1SvImJ_G0016517.1 mouse_genomes_project 1 138888650 138890938 + Arl8a protein_coding retained_intron MGP_129S1SvImJ_T0022277.1 MGP_129S1SvImJ_G0016517.1 mouse_genomes_project 1 138890824 138893447 + Arl8a protein_coding retained_intron MGP_129S1SvImJ_T0021055.1 MGP_129S1SvImJ_G0016246.1 mouse_genomes_project 1 87598804 87613455 - MGP_129S1SvImJ_P0021055 Ncl protein_coding protein_coding MGP_129S1SvImJ_T0021056.1 MGP_129S1SvImJ_G0016246.1 mouse_genomes_project 1 87604580 87613419 - Ncl protein_coding retained_intron MGP_129S1SvImJ_T0021057.1 MGP_129S1SvImJ_G0016246.1 mouse_genomes_project 1 87604581 87605297 - Ncl protein_coding retained_intron MGP_129S1SvImJ_T0021058.1 MGP_129S1SvImJ_G0016246.1 mouse_genomes_project 1 87604649 87606149 - Ncl protein_coding retained_intron MGP_129S1SvImJ_T0021059.1 MGP_129S1SvImJ_G0016246.1 mouse_genomes_project 1 87605186 87606392 - Ncl protein_coding retained_intron MGP_129S1SvImJ_T0021060.1 MGP_129S1SvImJ_G0016246.1 mouse_genomes_project 1 87611396 87613024 - MGP_129S1SvImJ_P0021060 Ncl protein_coding protein_coding MGP_129S1SvImJ_T0000830.1 MGP_129S1SvImJ_G0000764.1 mouse_genomes_project 1 201886286 201886818 + TEC TEC MGP_129S1SvImJ_T0101594.1 MGP_129S1SvImJ_G0039648.1 mouse_genomes_project 1 189182293 189183227 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101595.1 MGP_129S1SvImJ_G0039648.1 mouse_genomes_project 1 189182715 189193743 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0005814.1 MGP_129S1SvImJ_G0004878.1 mouse_genomes_project 1 77035623 77153284 + Gm29069 lincRNA lincRNA MGP_129S1SvImJ_T0020048.1 MGP_129S1SvImJ_G0016061.1 mouse_genomes_project 1 58996562 59044742 - MGP_129S1SvImJ_P0020048 Als2cr11 protein_coding protein_coding MGP_129S1SvImJ_T0020049.1 MGP_129S1SvImJ_G0016061.1 mouse_genomes_project 1 59016946 59032927 - Als2cr11 protein_coding processed_transcript MGP_129S1SvImJ_T0002925.1 MGP_129S1SvImJ_G0002757.1 mouse_genomes_project 1 150860964 150956499 - Gm29514 antisense antisense MGP_129S1SvImJ_T0002926.1 MGP_129S1SvImJ_G0002757.1 mouse_genomes_project 1 150868329 150956608 - Gm29514 antisense antisense MGP_129S1SvImJ_T0100396.1 MGP_129S1SvImJ_G0038463.1 mouse_genomes_project 1 168506247 168506369 + Gm22434 snoRNA snoRNA MGP_129S1SvImJ_T0000460.1 MGP_129S1SvImJ_G0000400.1 mouse_genomes_project 1 32032217 32033106 + TEC TEC MGP_129S1SvImJ_T0000461.1 MGP_129S1SvImJ_G0000400.1 mouse_genomes_project 1 32032236 32033106 + TEC TEC MGP_129S1SvImJ_T0019359.1 MGP_129S1SvImJ_G0015930.1 mouse_genomes_project 1 35242114 35246485 + MGP_129S1SvImJ_P0019359 Cox5b protein_coding protein_coding MGP_129S1SvImJ_T0019360.1 MGP_129S1SvImJ_G0015930.1 mouse_genomes_project 1 35242240 35246190 + MGP_129S1SvImJ_P0019360 Cox5b protein_coding protein_coding MGP_129S1SvImJ_T0019361.1 MGP_129S1SvImJ_G0015930.1 mouse_genomes_project 1 35242258 35243181 + Cox5b protein_coding retained_intron MGP_129S1SvImJ_T0019362.1 MGP_129S1SvImJ_G0015930.1 mouse_genomes_project 1 35242272 35243138 + Cox5b protein_coding retained_intron MGP_129S1SvImJ_T0019363.1 MGP_129S1SvImJ_G0015930.1 mouse_genomes_project 1 35242274 35246189 + Cox5b protein_coding processed_transcript MGP_129S1SvImJ_T0019364.1 MGP_129S1SvImJ_G0015930.1 mouse_genomes_project 1 35242318 35246190 + MGP_129S1SvImJ_P0019364 Cox5b protein_coding protein_coding MGP_129S1SvImJ_T0011977.1 MGP_129S1SvImJ_G0010066.1 mouse_genomes_project 1 32921579 32921872 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100386.1 MGP_129S1SvImJ_G0038453.1 mouse_genomes_project 1 166286948 166287010 + Gm22489 snoRNA snoRNA MGP_129S1SvImJ_T0000508.1 MGP_129S1SvImJ_G0000447.1 mouse_genomes_project 1 59813773 59817211 + TEC TEC MGP_129S1SvImJ_T0021740.1 MGP_129S1SvImJ_G0016398.1 mouse_genomes_project 1 122410594 122611769 - MGP_129S1SvImJ_P0021740 Ptpn4 protein_coding protein_coding MGP_129S1SvImJ_T0021741.1 MGP_129S1SvImJ_G0016398.1 mouse_genomes_project 1 122416171 122447453 - MGP_129S1SvImJ_P0021741 Ptpn4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021742.1 MGP_129S1SvImJ_G0016398.1 mouse_genomes_project 1 122449472 122611503 - MGP_129S1SvImJ_P0021742 Ptpn4 protein_coding protein_coding MGP_129S1SvImJ_T0021743.1 MGP_129S1SvImJ_G0016398.1 mouse_genomes_project 1 122452495 122508515 - MGP_129S1SvImJ_P0021743 Ptpn4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021744.1 MGP_129S1SvImJ_G0016398.1 mouse_genomes_project 1 122471197 122480827 - Ptpn4 protein_coding retained_intron MGP_129S1SvImJ_T0021745.1 MGP_129S1SvImJ_G0016398.1 mouse_genomes_project 1 122490919 122553887 - MGP_129S1SvImJ_P0021745 Ptpn4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021746.1 MGP_129S1SvImJ_G0016398.1 mouse_genomes_project 1 122510483 122573295 - MGP_129S1SvImJ_P0021746 Ptpn4 protein_coding protein_coding MGP_129S1SvImJ_T0021747.1 MGP_129S1SvImJ_G0016398.1 mouse_genomes_project 1 122534382 122611227 - MGP_129S1SvImJ_P0021747 Ptpn4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021748.1 MGP_129S1SvImJ_G0016398.1 mouse_genomes_project 1 122534722 122611227 - MGP_129S1SvImJ_P0021748 Ptpn4 protein_coding protein_coding MGP_129S1SvImJ_T0021749.1 MGP_129S1SvImJ_G0016398.1 mouse_genomes_project 1 122543382 122573315 - MGP_129S1SvImJ_P0021749 Ptpn4 protein_coding protein_coding MGP_129S1SvImJ_T0021750.1 MGP_129S1SvImJ_G0016398.1 mouse_genomes_project 1 122543442 122611155 - MGP_129S1SvImJ_P0021750 Ptpn4 protein_coding protein_coding MGP_129S1SvImJ_T0005715.1 MGP_129S1SvImJ_G0004811.1 mouse_genomes_project 1 40660436 40829306 + Gm29260 lincRNA lincRNA MGP_129S1SvImJ_T0005716.1 MGP_129S1SvImJ_G0004811.1 mouse_genomes_project 1 40808180 40809916 + Gm29260 lincRNA lincRNA MGP_129S1SvImJ_T0021824.1 MGP_129S1SvImJ_G0016418.1 mouse_genomes_project 1 129027861 129990726 - MGP_129S1SvImJ_P0021824 Nckap5 protein_coding protein_coding MGP_129S1SvImJ_T0021825.1 MGP_129S1SvImJ_G0016418.1 mouse_genomes_project 1 129027861 129990726 - MGP_129S1SvImJ_P0021825 Nckap5 protein_coding protein_coding MGP_129S1SvImJ_T0021826.1 MGP_129S1SvImJ_G0016418.1 mouse_genomes_project 1 129027872 129640993 - MGP_129S1SvImJ_P0021826 Nckap5 protein_coding protein_coding MGP_129S1SvImJ_T0021827.1 MGP_129S1SvImJ_G0016418.1 mouse_genomes_project 1 129028544 129082140 - Nckap5 protein_coding processed_transcript MGP_129S1SvImJ_T0021828.1 MGP_129S1SvImJ_G0016418.1 mouse_genomes_project 1 129028966 129599740 - MGP_129S1SvImJ_P0021828 Nckap5 protein_coding protein_coding MGP_129S1SvImJ_T0021829.1 MGP_129S1SvImJ_G0016418.1 mouse_genomes_project 1 129028966 129596649 - MGP_129S1SvImJ_P0021829 Nckap5 protein_coding protein_coding MGP_129S1SvImJ_T0021830.1 MGP_129S1SvImJ_G0016418.1 mouse_genomes_project 1 129029183 129140479 - MGP_129S1SvImJ_P0021830 Nckap5 protein_coding protein_coding MGP_129S1SvImJ_T0021831.1 MGP_129S1SvImJ_G0016418.1 mouse_genomes_project 1 129145242 129153416 - Nckap5 protein_coding processed_transcript MGP_129S1SvImJ_T0021832.1 MGP_129S1SvImJ_G0016418.1 mouse_genomes_project 1 129355592 129990893 - MGP_129S1SvImJ_P0021832 Nckap5 protein_coding protein_coding MGP_129S1SvImJ_T0021833.1 MGP_129S1SvImJ_G0016418.1 mouse_genomes_project 1 129391102 129897054 - MGP_129S1SvImJ_P0021833 Nckap5 protein_coding protein_coding MGP_129S1SvImJ_T0021834.1 MGP_129S1SvImJ_G0016418.1 mouse_genomes_project 1 129677119 129897042 - Nckap5 protein_coding retained_intron MGP_129S1SvImJ_T0021835.1 MGP_129S1SvImJ_G0016418.1 mouse_genomes_project 1 129679661 129990575 - Nckap5 protein_coding retained_intron MGP_129S1SvImJ_T0012321.1 MGP_129S1SvImJ_G0010410.1 mouse_genomes_project 1 164524141 164524647 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024129.1 MGP_129S1SvImJ_G0016924.1 mouse_genomes_project 1 194431943 194888260 + MGP_129S1SvImJ_P0024129 Esrrg protein_coding protein_coding MGP_129S1SvImJ_T0024130.1 MGP_129S1SvImJ_G0016924.1 mouse_genomes_project 1 194432181 195066271 + MGP_129S1SvImJ_P0024130 Esrrg protein_coding protein_coding MGP_129S1SvImJ_T0024131.1 MGP_129S1SvImJ_G0016924.1 mouse_genomes_project 1 194432847 194626323 + Esrrg protein_coding processed_transcript MGP_129S1SvImJ_T0024132.1 MGP_129S1SvImJ_G0016924.1 mouse_genomes_project 1 194835644 195066770 + MGP_129S1SvImJ_P0024132 Esrrg protein_coding protein_coding MGP_129S1SvImJ_T0024133.1 MGP_129S1SvImJ_G0016924.1 mouse_genomes_project 1 194835685 195066769 + MGP_129S1SvImJ_P0024133 Esrrg protein_coding protein_coding MGP_129S1SvImJ_T0000382.1 MGP_129S1SvImJ_G0000324.1 mouse_genomes_project 1 751750 754101 + TEC TEC MGP_129S1SvImJ_T0022671.1 MGP_129S1SvImJ_G0016596.1 mouse_genomes_project 1 158248839 158276227 + MGP_129S1SvImJ_P0022671 Shcbp1l protein_coding protein_coding MGP_129S1SvImJ_T0022672.1 MGP_129S1SvImJ_G0016596.1 mouse_genomes_project 1 158248849 158263605 + MGP_129S1SvImJ_P0022672 Shcbp1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022673.1 MGP_129S1SvImJ_G0016596.1 mouse_genomes_project 1 158269030 158272661 + Shcbp1l protein_coding retained_intron MGP_129S1SvImJ_T0000737.1 MGP_129S1SvImJ_G0000674.1 mouse_genomes_project 1 165821234 165823311 - TEC TEC MGP_129S1SvImJ_T0000663.1 MGP_129S1SvImJ_G0000601.1 mouse_genomes_project 1 138505202 138507293 - TEC TEC MGP_129S1SvImJ_T0019515.1 MGP_129S1SvImJ_G0015958.1 mouse_genomes_project 1 38280771 38293505 + MGP_129S1SvImJ_P0019515 Cnot11 protein_coding protein_coding MGP_129S1SvImJ_T0019516.1 MGP_129S1SvImJ_G0015958.1 mouse_genomes_project 1 38281556 38293489 + MGP_129S1SvImJ_P0019516 Cnot11 protein_coding protein_coding MGP_129S1SvImJ_T0019517.1 MGP_129S1SvImJ_G0015958.1 mouse_genomes_project 1 38284000 38293083 + Cnot11 protein_coding retained_intron MGP_129S1SvImJ_T0019518.1 MGP_129S1SvImJ_G0015958.1 mouse_genomes_project 1 38285789 38292001 + MGP_129S1SvImJ_P0019518 Cnot11 protein_coding protein_coding MGP_129S1SvImJ_T0023680.1 MGP_129S1SvImJ_G0016825.1 mouse_genomes_project 1 180188546 180189493 + MGP_129S1SvImJ_P0023680 Olfr424 protein_coding protein_coding MGP_129S1SvImJ_T0021666.1 MGP_129S1SvImJ_G0016386.1 mouse_genomes_project 1 113176077 113273314 - MGP_129S1SvImJ_P0021666 Cdh19 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0021667.1 MGP_129S1SvImJ_G0016386.1 mouse_genomes_project 1 113176085 113279157 - MGP_129S1SvImJ_P0021667 Cdh19 protein_coding protein_coding MGP_129S1SvImJ_T0021668.1 MGP_129S1SvImJ_G0016386.1 mouse_genomes_project 1 113248539 113279369 - Cdh19 protein_coding processed_transcript MGP_129S1SvImJ_T0102060.1 MGP_129S1SvImJ_G0039895.1 mouse_genomes_project 1 89520281 89520679 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0012241.1 MGP_129S1SvImJ_G0010330.1 mouse_genomes_project 1 126207133 126209767 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023172.1 MGP_129S1SvImJ_G0016693.1 mouse_genomes_project 1 170947135 170951150 + Mpc2 protein_coding retained_intron MGP_129S1SvImJ_T0023173.1 MGP_129S1SvImJ_G0016693.1 mouse_genomes_project 1 170947535 170975208 + MGP_129S1SvImJ_P0023173 Mpc2 protein_coding protein_coding MGP_129S1SvImJ_T0023174.1 MGP_129S1SvImJ_G0016693.1 mouse_genomes_project 1 170947722 170971688 + Mpc2 protein_coding retained_intron MGP_129S1SvImJ_T0023175.1 MGP_129S1SvImJ_G0016693.1 mouse_genomes_project 1 170947863 170975102 + MGP_129S1SvImJ_P0023175 Mpc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023176.1 MGP_129S1SvImJ_G0016693.1 mouse_genomes_project 1 170972135 170975113 + Mpc2 protein_coding processed_transcript MGP_129S1SvImJ_T0012279.1 MGP_129S1SvImJ_G0010368.1 mouse_genomes_project 1 147038901 147039196 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002939.1 MGP_129S1SvImJ_G0002767.1 mouse_genomes_project 1 161246281 161247768 + 4930518J20Rik antisense antisense MGP_129S1SvImJ_T0012317.1 MGP_129S1SvImJ_G0010406.1 mouse_genomes_project 1 162662511 162663116 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000637.1 MGP_129S1SvImJ_G0000576.1 mouse_genomes_project 1 131199561 131205540 - TEC TEC MGP_129S1SvImJ_T0019574.1 MGP_129S1SvImJ_G0015971.1 mouse_genomes_project 1 39489140 39583814 + MGP_129S1SvImJ_P0019574 Slc9a2 protein_coding protein_coding MGP_129S1SvImJ_T0019575.1 MGP_129S1SvImJ_G0015971.1 mouse_genomes_project 1 39491243 39537577 + MGP_129S1SvImJ_P0019575 Slc9a2 protein_coding protein_coding MGP_129S1SvImJ_T0019576.1 MGP_129S1SvImJ_G0015971.1 mouse_genomes_project 1 39568969 39570285 + Slc9a2 protein_coding retained_intron MGP_129S1SvImJ_T0020615.1 MGP_129S1SvImJ_G0016171.1 mouse_genomes_project 1 75693137 75703550 - MGP_129S1SvImJ_P0020615 Cnppd1 protein_coding protein_coding MGP_129S1SvImJ_T0020616.1 MGP_129S1SvImJ_G0016171.1 mouse_genomes_project 1 75694351 75702601 - MGP_129S1SvImJ_P0020616 Cnppd1 protein_coding protein_coding MGP_129S1SvImJ_T0020617.1 MGP_129S1SvImJ_G0016171.1 mouse_genomes_project 1 75694354 75699786 - Cnppd1 protein_coding retained_intron MGP_129S1SvImJ_T0020618.1 MGP_129S1SvImJ_G0016171.1 mouse_genomes_project 1 75694354 75703609 - MGP_129S1SvImJ_P0020618 Cnppd1 protein_coding protein_coding MGP_129S1SvImJ_T0020619.1 MGP_129S1SvImJ_G0016171.1 mouse_genomes_project 1 75695368 75696445 - Cnppd1 protein_coding retained_intron MGP_129S1SvImJ_T0020620.1 MGP_129S1SvImJ_G0016171.1 mouse_genomes_project 1 75695675 75696390 - Cnppd1 protein_coding retained_intron MGP_129S1SvImJ_T0020621.1 MGP_129S1SvImJ_G0016171.1 mouse_genomes_project 1 75700256 75702713 - MGP_129S1SvImJ_P0020621 Cnppd1 protein_coding protein_coding MGP_129S1SvImJ_T0020622.1 MGP_129S1SvImJ_G0016171.1 mouse_genomes_project 1 75700506 75703623 - MGP_129S1SvImJ_P0020622 Cnppd1 protein_coding protein_coding MGP_129S1SvImJ_T0002764.1 MGP_129S1SvImJ_G0002639.1 mouse_genomes_project 1 2013877 2020734 + Gm16041 antisense antisense MGP_129S1SvImJ_T0020041.1 MGP_129S1SvImJ_G0016060.1 mouse_genomes_project 1 58916017 58926560 + Stradb protein_coding retained_intron MGP_129S1SvImJ_T0020042.1 MGP_129S1SvImJ_G0016060.1 mouse_genomes_project 1 58916017 58932938 + Stradb protein_coding retained_intron MGP_129S1SvImJ_T0020043.1 MGP_129S1SvImJ_G0016060.1 mouse_genomes_project 1 58916017 58938062 + MGP_129S1SvImJ_P0020043 Stradb protein_coding protein_coding MGP_129S1SvImJ_T0020044.1 MGP_129S1SvImJ_G0016060.1 mouse_genomes_project 1 58916017 58942219 + MGP_129S1SvImJ_P0020044 Stradb protein_coding protein_coding MGP_129S1SvImJ_T0020045.1 MGP_129S1SvImJ_G0016060.1 mouse_genomes_project 1 58916017 58941626 + MGP_129S1SvImJ_P0020045 Stradb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020046.1 MGP_129S1SvImJ_G0016060.1 mouse_genomes_project 1 58916017 58941501 + MGP_129S1SvImJ_P0020046 Stradb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020047.1 MGP_129S1SvImJ_G0016060.1 mouse_genomes_project 1 58936121 58940863 + MGP_129S1SvImJ_P0020047 Stradb protein_coding protein_coding MGP_129S1SvImJ_T0023032.1 MGP_129S1SvImJ_G0016659.1 mouse_genomes_project 1 167864756 167881182 - MGP_129S1SvImJ_P0023032 Mettl13 protein_coding protein_coding MGP_129S1SvImJ_T0023033.1 MGP_129S1SvImJ_G0016659.1 mouse_genomes_project 1 167866308 167881153 - MGP_129S1SvImJ_P0023033 Mettl13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023034.1 MGP_129S1SvImJ_G0016659.1 mouse_genomes_project 1 167868471 167876993 - MGP_129S1SvImJ_P0023034 Mettl13 protein_coding protein_coding MGP_129S1SvImJ_T0023035.1 MGP_129S1SvImJ_G0016659.1 mouse_genomes_project 1 167869772 167880887 - Mettl13 protein_coding processed_transcript MGP_129S1SvImJ_T0023036.1 MGP_129S1SvImJ_G0016659.1 mouse_genomes_project 1 167871549 167879158 - MGP_129S1SvImJ_P0023036 Mettl13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023037.1 MGP_129S1SvImJ_G0016659.1 mouse_genomes_project 1 167874079 167881169 - Mettl13 protein_coding retained_intron MGP_129S1SvImJ_T0023038.1 MGP_129S1SvImJ_G0016659.1 mouse_genomes_project 1 167876266 167881159 - Mettl13 protein_coding retained_intron MGP_129S1SvImJ_T0023039.1 MGP_129S1SvImJ_G0016659.1 mouse_genomes_project 1 167879458 167881160 - Mettl13 protein_coding retained_intron MGP_129S1SvImJ_T0021537.1 MGP_129S1SvImJ_G0016355.1 mouse_genomes_project 1 97301455 97383804 - MGP_129S1SvImJ_P0021537 St8sia4 protein_coding protein_coding MGP_129S1SvImJ_T0021538.1 MGP_129S1SvImJ_G0016355.1 mouse_genomes_project 1 97333947 97383768 - MGP_129S1SvImJ_P0021538 St8sia4 protein_coding protein_coding MGP_129S1SvImJ_T0021539.1 MGP_129S1SvImJ_G0016355.1 mouse_genomes_project 1 97374560 97383801 - St8sia4 protein_coding retained_intron MGP_129S1SvImJ_T0021540.1 MGP_129S1SvImJ_G0016355.1 mouse_genomes_project 1 97380197 97383798 - St8sia4 protein_coding retained_intron MGP_129S1SvImJ_T0005876.1 MGP_129S1SvImJ_G0004931.1 mouse_genomes_project 1 103833676 103835802 - Gm28187 lincRNA lincRNA MGP_129S1SvImJ_T0002811.1 MGP_129S1SvImJ_G0002671.1 mouse_genomes_project 1 38859676 38869237 - Gm16894 antisense antisense MGP_129S1SvImJ_T0100397.1 MGP_129S1SvImJ_G0038464.1 mouse_genomes_project 1 170932387 170932472 + Gm24637 snoRNA snoRNA MGP_129S1SvImJ_T0000742.1 MGP_129S1SvImJ_G0000679.1 mouse_genomes_project 1 166148182 166149931 + TEC TEC MGP_129S1SvImJ_T0020486.1 MGP_129S1SvImJ_G0016146.1 mouse_genomes_project 1 74872874 74875400 + MGP_129S1SvImJ_P0020486 Pnkd protein_coding protein_coding MGP_129S1SvImJ_T0020487.1 MGP_129S1SvImJ_G0016146.1 mouse_genomes_project 1 74872989 74947556 + MGP_129S1SvImJ_P0020487 Pnkd protein_coding protein_coding MGP_129S1SvImJ_T0020488.1 MGP_129S1SvImJ_G0016146.1 mouse_genomes_project 1 74872994 74874580 + Pnkd protein_coding retained_intron MGP_129S1SvImJ_T0020489.1 MGP_129S1SvImJ_G0016146.1 mouse_genomes_project 1 74872998 74941295 + Pnkd protein_coding retained_intron MGP_129S1SvImJ_T0020490.1 MGP_129S1SvImJ_G0016146.1 mouse_genomes_project 1 74872999 74947566 + MGP_129S1SvImJ_P0020490 Pnkd protein_coding protein_coding MGP_129S1SvImJ_T0020491.1 MGP_129S1SvImJ_G0016146.1 mouse_genomes_project 1 74873721 74875219 + Pnkd protein_coding retained_intron MGP_129S1SvImJ_T0020500.1 MGP_129S1SvImJ_G0016146.1 mouse_genomes_project 1 74922502 74947558 + MGP_129S1SvImJ_P0020500 Pnkd protein_coding protein_coding MGP_129S1SvImJ_T0020501.1 MGP_129S1SvImJ_G0016146.1 mouse_genomes_project 1 74922555 74926154 + Pnkd protein_coding retained_intron MGP_129S1SvImJ_T0012190.1 MGP_129S1SvImJ_G0010279.1 mouse_genomes_project 1 109347484 109348329 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002989.1 MGP_129S1SvImJ_G0002808.1 mouse_genomes_project 1 189115737 189125390 + Gm37885 antisense antisense MGP_129S1SvImJ_T0002990.1 MGP_129S1SvImJ_G0002808.1 mouse_genomes_project 1 189122945 189124518 + Gm37885 antisense antisense MGP_129S1SvImJ_T0019068.1 MGP_129S1SvImJ_G0015870.1 mouse_genomes_project 1 18352107 18355696 + MGP_129S1SvImJ_P0019068 Il17a protein_coding protein_coding MGP_129S1SvImJ_T0000672.1 MGP_129S1SvImJ_G0000610.1 mouse_genomes_project 1 141795184 141795479 + TEC TEC MGP_129S1SvImJ_T0020263.1 MGP_129S1SvImJ_G0016099.1 mouse_genomes_project 1 64971532 65140654 - MGP_129S1SvImJ_P0020263 Plekhm3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020264.1 MGP_129S1SvImJ_G0016099.1 mouse_genomes_project 1 64974670 65140654 - MGP_129S1SvImJ_P0020264 Plekhm3 protein_coding protein_coding MGP_129S1SvImJ_T0020265.1 MGP_129S1SvImJ_G0016099.1 mouse_genomes_project 1 64979358 65021805 - Plekhm3 protein_coding processed_transcript MGP_129S1SvImJ_T0020266.1 MGP_129S1SvImJ_G0016099.1 mouse_genomes_project 1 65046159 65112155 - Plekhm3 protein_coding retained_intron MGP_129S1SvImJ_T0020267.1 MGP_129S1SvImJ_G0016099.1 mouse_genomes_project 1 65122171 65140605 - MGP_129S1SvImJ_P0020267 Plekhm3 protein_coding protein_coding MGP_129S1SvImJ_T0020268.1 MGP_129S1SvImJ_G0016099.1 mouse_genomes_project 1 65136993 65140557 - Plekhm3 protein_coding processed_transcript MGP_129S1SvImJ_T0022132.1 MGP_129S1SvImJ_G0016484.1 mouse_genomes_project 1 136845444 136866961 + MGP_129S1SvImJ_P0022132 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022133.1 MGP_129S1SvImJ_G0016484.1 mouse_genomes_project 1 136845444 136866754 + MGP_129S1SvImJ_P0022133 protein_coding protein_coding MGP_129S1SvImJ_T0022135.1 MGP_129S1SvImJ_G0016484.1 mouse_genomes_project 1 136858948 136866961 + MGP_129S1SvImJ_P0022135 protein_coding protein_coding MGP_129S1SvImJ_T0022137.1 MGP_129S1SvImJ_G0016484.1 mouse_genomes_project 1 136864268 136866782 + MGP_129S1SvImJ_P0022137 protein_coding protein_coding MGP_129S1SvImJ_T0024110.1 MGP_129S1SvImJ_G0016921.1 mouse_genomes_project 1 193775420 193778632 + MGP_129S1SvImJ_P0024110 D1Pas1 protein_coding protein_coding MGP_129S1SvImJ_T0009540.1 MGP_129S1SvImJ_G0007656.1 mouse_genomes_project 1 131429298 131429368 + Mir128-1 miRNA miRNA MGP_129S1SvImJ_T0017035.1 MGP_129S1SvImJ_G0015104.1 mouse_genomes_project 1 83614132 83646218 - C430014B12Rik processed_transcript antisense MGP_129S1SvImJ_T0017036.1 MGP_129S1SvImJ_G0015104.1 mouse_genomes_project 1 83640344 83646270 - C430014B12Rik processed_transcript antisense MGP_129S1SvImJ_T0017037.1 MGP_129S1SvImJ_G0015104.1 mouse_genomes_project 1 83642204 83646248 - C430014B12Rik processed_transcript retained_intron MGP_129S1SvImJ_T0012251.1 MGP_129S1SvImJ_G0010340.1 mouse_genomes_project 1 132042930 132043352 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023049.1 MGP_129S1SvImJ_G0016663.1 mouse_genomes_project 1 168012412 168089993 - MGP_129S1SvImJ_P0023049 Prrc2c protein_coding protein_coding MGP_129S1SvImJ_T0023050.1 MGP_129S1SvImJ_G0016663.1 mouse_genomes_project 1 168012414 168090024 - MGP_129S1SvImJ_P0023050 Prrc2c protein_coding protein_coding MGP_129S1SvImJ_T0023051.1 MGP_129S1SvImJ_G0016663.1 mouse_genomes_project 1 168013475 168050322 - MGP_129S1SvImJ_P0023051 Prrc2c protein_coding protein_coding MGP_129S1SvImJ_T0023052.1 MGP_129S1SvImJ_G0016663.1 mouse_genomes_project 1 168014782 168089949 - MGP_129S1SvImJ_P0023052 Prrc2c protein_coding protein_coding MGP_129S1SvImJ_T0023053.1 MGP_129S1SvImJ_G0016663.1 mouse_genomes_project 1 168015090 168090018 - MGP_129S1SvImJ_P0023053 Prrc2c protein_coding protein_coding MGP_129S1SvImJ_T0023054.1 MGP_129S1SvImJ_G0016663.1 mouse_genomes_project 1 168029010 168033321 - Prrc2c protein_coding retained_intron MGP_129S1SvImJ_T0023055.1 MGP_129S1SvImJ_G0016663.1 mouse_genomes_project 1 168055497 168089872 - MGP_129S1SvImJ_P0023055 Prrc2c protein_coding protein_coding MGP_129S1SvImJ_T0023056.1 MGP_129S1SvImJ_G0016663.1 mouse_genomes_project 1 168057932 168059147 - Prrc2c protein_coding retained_intron MGP_129S1SvImJ_T0023057.1 MGP_129S1SvImJ_G0016663.1 mouse_genomes_project 1 168065030 168089965 - Prrc2c protein_coding retained_intron MGP_129S1SvImJ_T0023058.1 MGP_129S1SvImJ_G0016663.1 mouse_genomes_project 1 168065683 168089818 - MGP_129S1SvImJ_P0023058 Prrc2c protein_coding protein_coding MGP_129S1SvImJ_T0023059.1 MGP_129S1SvImJ_G0016663.1 mouse_genomes_project 1 168068043 168070007 - Prrc2c protein_coding retained_intron MGP_129S1SvImJ_T0023060.1 MGP_129S1SvImJ_G0016663.1 mouse_genomes_project 1 168078084 168080189 - Prrc2c protein_coding retained_intron MGP_129S1SvImJ_T0023061.1 MGP_129S1SvImJ_G0016663.1 mouse_genomes_project 1 168079724 168089955 - Prrc2c protein_coding processed_transcript MGP_129S1SvImJ_T0000708.1 MGP_129S1SvImJ_G0000645.1 mouse_genomes_project 1 157719126 157719564 + TEC TEC MGP_129S1SvImJ_T0019069.1 MGP_129S1SvImJ_G0015871.1 mouse_genomes_project 1 18402594 18409722 - MGP_129S1SvImJ_P0019069 Il17f protein_coding protein_coding MGP_129S1SvImJ_T0019070.1 MGP_129S1SvImJ_G0015871.1 mouse_genomes_project 1 18403127 18405004 - Il17f protein_coding retained_intron MGP_129S1SvImJ_T0019071.1 MGP_129S1SvImJ_G0015871.1 mouse_genomes_project 1 18403179 18415991 - MGP_129S1SvImJ_P0019071 Il17f protein_coding protein_coding MGP_129S1SvImJ_T0012380.1 MGP_129S1SvImJ_G0010469.1 mouse_genomes_project 1 193812644 193813242 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099108.1 MGP_129S1SvImJ_G0037175.1 mouse_genomes_project 1 121385850 121385980 + Gm23497 snRNA snRNA MGP_129S1SvImJ_T0005983.1 MGP_129S1SvImJ_G0005015.1 mouse_genomes_project 1 167200048 167211894 + Gm31925 lincRNA lincRNA MGP_129S1SvImJ_T0005984.1 MGP_129S1SvImJ_G0005015.1 mouse_genomes_project 1 167201675 167214118 + Gm31925 lincRNA lincRNA MGP_129S1SvImJ_T0024259.1 MGP_129S1SvImJ_G0016949.1 mouse_genomes_project 1 198986256 198992734 + MGP_129S1SvImJ_P0024259 Slc30a1 protein_coding protein_coding MGP_129S1SvImJ_T0024260.1 MGP_129S1SvImJ_G0016949.1 mouse_genomes_project 1 198986745 198988664 + MGP_129S1SvImJ_P0024260 Slc30a1 protein_coding protein_coding MGP_129S1SvImJ_T0005740.1 MGP_129S1SvImJ_G0004823.1 mouse_genomes_project 1 48650979 48736483 + C230029F24Rik lincRNA lincRNA MGP_129S1SvImJ_T0005741.1 MGP_129S1SvImJ_G0004823.1 mouse_genomes_project 1 48650979 48738370 + C230029F24Rik lincRNA lincRNA MGP_129S1SvImJ_T0006037.1 MGP_129S1SvImJ_G0005058.1 mouse_genomes_project 1 189650704 189650858 + Gm38079 lincRNA lincRNA MGP_129S1SvImJ_T0009483.1 MGP_129S1SvImJ_G0007599.1 mouse_genomes_project 1 21070584 21070668 + Mir30c-2 miRNA miRNA MGP_129S1SvImJ_T0022987.1 MGP_129S1SvImJ_G0016650.1 mouse_genomes_project 1 166399077 166421609 + MGP_129S1SvImJ_P0022987 Ankrd45 protein_coding protein_coding MGP_129S1SvImJ_T0022988.1 MGP_129S1SvImJ_G0016650.1 mouse_genomes_project 1 166399098 166428541 + MGP_129S1SvImJ_P0022988 Ankrd45 protein_coding protein_coding MGP_129S1SvImJ_T0022989.1 MGP_129S1SvImJ_G0016650.1 mouse_genomes_project 1 166399109 166425955 + MGP_129S1SvImJ_P0022989 Ankrd45 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022990.1 MGP_129S1SvImJ_G0016650.1 mouse_genomes_project 1 166399126 166422527 + MGP_129S1SvImJ_P0022990 Ankrd45 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022991.1 MGP_129S1SvImJ_G0016650.1 mouse_genomes_project 1 166399153 166422504 + MGP_129S1SvImJ_P0022991 Ankrd45 protein_coding protein_coding MGP_129S1SvImJ_T0011901.1 MGP_129S1SvImJ_G0009990.1 mouse_genomes_project 1 6663462 6664632 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002806.1 MGP_129S1SvImJ_G0002667.1 mouse_genomes_project 1 36970044 36974073 + Gm16151 antisense antisense MGP_129S1SvImJ_T0022616.1 MGP_129S1SvImJ_G0016584.1 mouse_genomes_project 1 156503538 156566544 + MGP_129S1SvImJ_P0022616 Edem3 protein_coding protein_coding MGP_129S1SvImJ_T0022617.1 MGP_129S1SvImJ_G0016584.1 mouse_genomes_project 1 156503541 156569660 + MGP_129S1SvImJ_P0022617 Edem3 protein_coding protein_coding MGP_129S1SvImJ_T0022618.1 MGP_129S1SvImJ_G0016584.1 mouse_genomes_project 1 156503627 156566588 + MGP_129S1SvImJ_P0022618 Edem3 protein_coding protein_coding MGP_129S1SvImJ_T0022619.1 MGP_129S1SvImJ_G0016584.1 mouse_genomes_project 1 156503627 156566588 + MGP_129S1SvImJ_P0022619 Edem3 protein_coding protein_coding MGP_129S1SvImJ_T0012186.1 MGP_129S1SvImJ_G0010275.1 mouse_genomes_project 1 108095678 108096203 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000439.1 MGP_129S1SvImJ_G0000379.1 mouse_genomes_project 1 23507342 23510284 - TEC TEC MGP_129S1SvImJ_T0005942.1 MGP_129S1SvImJ_G0004984.1 mouse_genomes_project 1 141926426 141971119 - Gm26936 lincRNA lincRNA MGP_129S1SvImJ_T0005943.1 MGP_129S1SvImJ_G0004984.1 mouse_genomes_project 1 141964347 141971094 - Gm26936 lincRNA lincRNA MGP_129S1SvImJ_T0000764.1 MGP_129S1SvImJ_G0000701.1 mouse_genomes_project 1 177523640 177525443 + TEC TEC MGP_129S1SvImJ_T0019580.1 MGP_129S1SvImJ_G0015973.1 mouse_genomes_project 1 39622029 39675006 + MGP_129S1SvImJ_P0019580 Tmem182 protein_coding protein_coding MGP_129S1SvImJ_T0000760.1 MGP_129S1SvImJ_G0000697.1 mouse_genomes_project 1 173963698 173965398 - TEC TEC MGP_129S1SvImJ_T0005817.1 MGP_129S1SvImJ_G0004880.1 mouse_genomes_project 1 77535095 77678753 - Gm816 lincRNA lincRNA MGP_129S1SvImJ_T0000620.1 MGP_129S1SvImJ_G0000559.1 mouse_genomes_project 1 125438194 125439312 + TEC TEC MGP_129S1SvImJ_T0020675.1 MGP_129S1SvImJ_G0016178.1 mouse_genomes_project 1 75774967 75779736 + MGP_129S1SvImJ_P0020675 Stk16 protein_coding protein_coding MGP_129S1SvImJ_T0020676.1 MGP_129S1SvImJ_G0016178.1 mouse_genomes_project 1 75774975 75776001 + Stk16 protein_coding retained_intron MGP_129S1SvImJ_T0020677.1 MGP_129S1SvImJ_G0016178.1 mouse_genomes_project 1 75774977 75776365 + MGP_129S1SvImJ_P0020677 Stk16 protein_coding protein_coding MGP_129S1SvImJ_T0020678.1 MGP_129S1SvImJ_G0016178.1 mouse_genomes_project 1 75774999 75778372 + MGP_129S1SvImJ_P0020678 Stk16 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020679.1 MGP_129S1SvImJ_G0016178.1 mouse_genomes_project 1 75775003 75776364 + MGP_129S1SvImJ_P0020679 Stk16 protein_coding protein_coding MGP_129S1SvImJ_T0020680.1 MGP_129S1SvImJ_G0016178.1 mouse_genomes_project 1 75775005 75778369 + Stk16 protein_coding retained_intron MGP_129S1SvImJ_T0020681.1 MGP_129S1SvImJ_G0016178.1 mouse_genomes_project 1 75775009 75777267 + Stk16 protein_coding processed_transcript MGP_129S1SvImJ_T0020682.1 MGP_129S1SvImJ_G0016178.1 mouse_genomes_project 1 75775183 75777358 + MGP_129S1SvImJ_P0020682 Stk16 protein_coding protein_coding MGP_129S1SvImJ_T0020683.1 MGP_129S1SvImJ_G0016178.1 mouse_genomes_project 1 75775369 75778081 + MGP_129S1SvImJ_P0020683 Stk16 protein_coding protein_coding MGP_129S1SvImJ_T0020684.1 MGP_129S1SvImJ_G0016178.1 mouse_genomes_project 1 75776091 75777317 + Stk16 protein_coding retained_intron MGP_129S1SvImJ_T0020685.1 MGP_129S1SvImJ_G0016178.1 mouse_genomes_project 1 75776132 75777223 + Stk16 protein_coding retained_intron MGP_129S1SvImJ_T0020686.1 MGP_129S1SvImJ_G0016178.1 mouse_genomes_project 1 75776134 75776535 + Stk16 protein_coding retained_intron MGP_129S1SvImJ_T0020687.1 MGP_129S1SvImJ_G0016178.1 mouse_genomes_project 1 75776528 75777285 + Stk16 protein_coding retained_intron MGP_129S1SvImJ_T0020688.1 MGP_129S1SvImJ_G0016178.1 mouse_genomes_project 1 75776753 75778146 + Stk16 protein_coding processed_transcript MGP_129S1SvImJ_T0020689.1 MGP_129S1SvImJ_G0016178.1 mouse_genomes_project 1 75776761 75778043 + Stk16 protein_coding retained_intron MGP_129S1SvImJ_T0020690.1 MGP_129S1SvImJ_G0016178.1 mouse_genomes_project 1 75777190 75778161 + Stk16 protein_coding retained_intron MGP_129S1SvImJ_T0022255.1 MGP_129S1SvImJ_G0016513.1 mouse_genomes_project 1 138458173 138679523 - MGP_129S1SvImJ_P0022255 Ppp1r12b protein_coding protein_coding MGP_129S1SvImJ_T0022256.1 MGP_129S1SvImJ_G0016513.1 mouse_genomes_project 1 138459078 138463893 - Ppp1r12b protein_coding processed_transcript MGP_129S1SvImJ_T0022257.1 MGP_129S1SvImJ_G0016513.1 mouse_genomes_project 1 138462604 138558766 - Ppp1r12b protein_coding processed_transcript MGP_129S1SvImJ_T0022258.1 MGP_129S1SvImJ_G0016513.1 mouse_genomes_project 1 138463508 138679434 - MGP_129S1SvImJ_P0022258 Ppp1r12b protein_coding protein_coding MGP_129S1SvImJ_T0022259.1 MGP_129S1SvImJ_G0016513.1 mouse_genomes_project 1 138469440 138679523 - MGP_129S1SvImJ_P0022259 Ppp1r12b protein_coding protein_coding MGP_129S1SvImJ_T0022260.1 MGP_129S1SvImJ_G0016513.1 mouse_genomes_project 1 138484040 138510684 - Ppp1r12b protein_coding retained_intron MGP_129S1SvImJ_T0022261.1 MGP_129S1SvImJ_G0016513.1 mouse_genomes_project 1 138486618 138488999 - Ppp1r12b protein_coding retained_intron MGP_129S1SvImJ_T0022262.1 MGP_129S1SvImJ_G0016513.1 mouse_genomes_project 1 138546393 138548152 - Ppp1r12b protein_coding processed_transcript MGP_129S1SvImJ_T0022263.1 MGP_129S1SvImJ_G0016513.1 mouse_genomes_project 1 138546396 138679511 - Ppp1r12b protein_coding retained_intron MGP_129S1SvImJ_T0022264.1 MGP_129S1SvImJ_G0016513.1 mouse_genomes_project 1 138670782 138679525 - MGP_129S1SvImJ_P0022264 Ppp1r12b protein_coding protein_coding MGP_129S1SvImJ_T0011981.1 MGP_129S1SvImJ_G0010070.1 mouse_genomes_project 1 33014943 33016340 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000628.1 MGP_129S1SvImJ_G0000567.1 mouse_genomes_project 1 126837988 126840842 - TEC TEC MGP_129S1SvImJ_T0009510.1 MGP_129S1SvImJ_G0007626.1 mouse_genomes_project 1 68254150 68254252 + Gm23189 miRNA miRNA MGP_129S1SvImJ_T0023784.1 MGP_129S1SvImJ_G0016852.1 mouse_genomes_project 1 184226364 184291475 + MGP_129S1SvImJ_P0023784 Gm16432 protein_coding protein_coding MGP_129S1SvImJ_T0020951.1 MGP_129S1SvImJ_G0016226.1 mouse_genomes_project 1 85047647 85312839 - MGP_129S1SvImJ_P0020951 Pid1 protein_coding protein_coding MGP_129S1SvImJ_T0020952.1 MGP_129S1SvImJ_G0016226.1 mouse_genomes_project 1 85048582 85367844 - MGP_129S1SvImJ_P0020952 Pid1 protein_coding protein_coding MGP_129S1SvImJ_T0020953.1 MGP_129S1SvImJ_G0016226.1 mouse_genomes_project 1 85049277 85068451 - Pid1 protein_coding processed_transcript MGP_129S1SvImJ_T0020954.1 MGP_129S1SvImJ_G0016226.1 mouse_genomes_project 1 85096679 85312617 - MGP_129S1SvImJ_P0020954 Pid1 protein_coding protein_coding MGP_129S1SvImJ_T0020955.1 MGP_129S1SvImJ_G0016226.1 mouse_genomes_project 1 85126552 85399242 - MGP_129S1SvImJ_P0020955 Pid1 protein_coding protein_coding MGP_129S1SvImJ_T0020956.1 MGP_129S1SvImJ_G0016226.1 mouse_genomes_project 1 85134090 85376439 - MGP_129S1SvImJ_P0020956 Pid1 protein_coding protein_coding MGP_129S1SvImJ_T0020957.1 MGP_129S1SvImJ_G0016226.1 mouse_genomes_project 1 85182648 85312805 - MGP_129S1SvImJ_P0020957 Pid1 protein_coding protein_coding MGP_129S1SvImJ_T0020958.1 MGP_129S1SvImJ_G0016226.1 mouse_genomes_project 1 85311386 85312817 - Pid1 protein_coding retained_intron MGP_129S1SvImJ_T0012275.1 MGP_129S1SvImJ_G0010364.1 mouse_genomes_project 1 144135839 144136260 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099088.1 MGP_129S1SvImJ_G0037155.1 mouse_genomes_project 1 66697479 66697630 + Gm25411 snRNA snRNA MGP_129S1SvImJ_T0005880.1 MGP_129S1SvImJ_G0004934.1 mouse_genomes_project 1 108300200 108319092 - Gm20753 lincRNA lincRNA MGP_129S1SvImJ_T0022654.1 MGP_129S1SvImJ_G0016593.1 mouse_genomes_project 1 157739763 157913724 + MGP_129S1SvImJ_P0022654 Nmnat2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022655.1 MGP_129S1SvImJ_G0016593.1 mouse_genomes_project 1 157739768 157913821 + MGP_129S1SvImJ_P0022655 Nmnat2 protein_coding protein_coding MGP_129S1SvImJ_T0022656.1 MGP_129S1SvImJ_G0016593.1 mouse_genomes_project 1 157739811 157886105 + MGP_129S1SvImJ_P0022656 Nmnat2 protein_coding protein_coding MGP_129S1SvImJ_T0022657.1 MGP_129S1SvImJ_G0016593.1 mouse_genomes_project 1 157740044 157872377 + Nmnat2 protein_coding processed_transcript MGP_129S1SvImJ_T0022658.1 MGP_129S1SvImJ_G0016593.1 mouse_genomes_project 1 157826394 157869686 + Nmnat2 protein_coding retained_intron MGP_129S1SvImJ_T0022659.1 MGP_129S1SvImJ_G0016593.1 mouse_genomes_project 1 157885496 157886614 + Nmnat2 protein_coding processed_transcript MGP_129S1SvImJ_T0023998.1 MGP_129S1SvImJ_G0016895.1 mouse_genomes_project 1 189097609 189150805 - MGP_129S1SvImJ_P0023998 Capn2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0023999.1 MGP_129S1SvImJ_G0016895.1 mouse_genomes_project 1 189097619 189150975 - MGP_129S1SvImJ_P0023999 Capn2 protein_coding protein_coding MGP_129S1SvImJ_T0024000.1 MGP_129S1SvImJ_G0016895.1 mouse_genomes_project 1 189100573 189111410 - Capn2 protein_coding retained_intron MGP_129S1SvImJ_T0024001.1 MGP_129S1SvImJ_G0016895.1 mouse_genomes_project 1 189104141 189113097 - Capn2 protein_coding retained_intron MGP_129S1SvImJ_T0024002.1 MGP_129S1SvImJ_G0016895.1 mouse_genomes_project 1 189115458 189125478 - Capn2 protein_coding retained_intron MGP_129S1SvImJ_T0024003.1 MGP_129S1SvImJ_G0016895.1 mouse_genomes_project 1 189115463 189151059 - Capn2 protein_coding retained_intron MGP_129S1SvImJ_T0012264.1 MGP_129S1SvImJ_G0010353.1 mouse_genomes_project 1 140341493 140341865 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002890.1 MGP_129S1SvImJ_G0002730.1 mouse_genomes_project 1 121153232 121153884 - 2900060B14Rik antisense antisense MGP_129S1SvImJ_T0002891.1 MGP_129S1SvImJ_G0002730.1 mouse_genomes_project 1 121153286 121153364 - 2900060B14Rik antisense antisense MGP_129S1SvImJ_T0023955.1 MGP_129S1SvImJ_G0016887.1 mouse_genomes_project 1 188297576 188313443 + protein_coding retained_intron MGP_129S1SvImJ_T0023956.1 MGP_129S1SvImJ_G0016887.1 mouse_genomes_project 1 188299624 188328682 + MGP_129S1SvImJ_P0023956 protein_coding protein_coding MGP_129S1SvImJ_T0023957.1 MGP_129S1SvImJ_G0016887.1 mouse_genomes_project 1 188301328 188305043 + protein_coding processed_transcript MGP_129S1SvImJ_T0000789.1 MGP_129S1SvImJ_G0000725.1 mouse_genomes_project 1 186798398 186799270 + TEC TEC MGP_129S1SvImJ_T0023372.1 MGP_129S1SvImJ_G0016741.1 mouse_genomes_project 1 176888853 176902503 + MGP_129S1SvImJ_P0023372 Cfap126 protein_coding protein_coding MGP_129S1SvImJ_T0023373.1 MGP_129S1SvImJ_G0016741.1 mouse_genomes_project 1 176888924 176902453 + MGP_129S1SvImJ_P0023373 Cfap126 protein_coding protein_coding MGP_129S1SvImJ_T0023374.1 MGP_129S1SvImJ_G0016741.1 mouse_genomes_project 1 176897439 176902641 + MGP_129S1SvImJ_P0023374 Cfap126 protein_coding protein_coding MGP_129S1SvImJ_T0023375.1 MGP_129S1SvImJ_G0016741.1 mouse_genomes_project 1 176897442 176898917 + Cfap126 protein_coding processed_transcript MGP_129S1SvImJ_T0023376.1 MGP_129S1SvImJ_G0016741.1 mouse_genomes_project 1 176898437 176901710 + MGP_129S1SvImJ_P0023376 Cfap126 protein_coding protein_coding MGP_129S1SvImJ_T0023377.1 MGP_129S1SvImJ_G0016741.1 mouse_genomes_project 1 176898910 176902616 + MGP_129S1SvImJ_P0023377 Cfap126 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023378.1 MGP_129S1SvImJ_G0016741.1 mouse_genomes_project 1 176898934 176901754 + MGP_129S1SvImJ_P0023378 Cfap126 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023379.1 MGP_129S1SvImJ_G0016741.1 mouse_genomes_project 1 176900728 176902333 + MGP_129S1SvImJ_P0023379 Cfap126 protein_coding protein_coding MGP_129S1SvImJ_T0012008.1 MGP_129S1SvImJ_G0010097.1 mouse_genomes_project 1 43375705 43376694 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019173.1 MGP_129S1SvImJ_G0015896.1 mouse_genomes_project 1 29149507 29163239 - MGP_129S1SvImJ_P0019173 Ptp4a1 protein_coding protein_coding MGP_129S1SvImJ_T0019174.1 MGP_129S1SvImJ_G0015896.1 mouse_genomes_project 1 29152673 29153757 - Ptp4a1 protein_coding retained_intron MGP_129S1SvImJ_T0019175.1 MGP_129S1SvImJ_G0015896.1 mouse_genomes_project 1 29159645 29162778 - Ptp4a1 protein_coding processed_transcript MGP_129S1SvImJ_T0019176.1 MGP_129S1SvImJ_G0015896.1 mouse_genomes_project 1 29160010 29163056 - MGP_129S1SvImJ_P0019176 Ptp4a1 protein_coding protein_coding MGP_129S1SvImJ_T0022532.1 MGP_129S1SvImJ_G0016570.1 mouse_genomes_project 1 150956307 151383958 + MGP_129S1SvImJ_P0022532 Brinp3 protein_coding protein_coding MGP_129S1SvImJ_T0022533.1 MGP_129S1SvImJ_G0016570.1 mouse_genomes_project 1 150959163 151222226 + MGP_129S1SvImJ_P0022533 Brinp3 protein_coding protein_coding MGP_129S1SvImJ_T0022534.1 MGP_129S1SvImJ_G0016570.1 mouse_genomes_project 1 150959236 151383959 + MGP_129S1SvImJ_P0022534 Brinp3 protein_coding protein_coding MGP_129S1SvImJ_T0022535.1 MGP_129S1SvImJ_G0016570.1 mouse_genomes_project 1 150959253 151383953 + MGP_129S1SvImJ_P0022535 Brinp3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022536.1 MGP_129S1SvImJ_G0016570.1 mouse_genomes_project 1 150959287 150979444 + Brinp3 protein_coding retained_intron MGP_129S1SvImJ_T0000775.1 MGP_129S1SvImJ_G0000712.1 mouse_genomes_project 1 183128456 183131707 + TEC TEC MGP_129S1SvImJ_T0000405.1 MGP_129S1SvImJ_G0000347.1 mouse_genomes_project 1 10549854 10552111 - TEC TEC MGP_129S1SvImJ_T0000392.1 MGP_129S1SvImJ_G0000334.1 mouse_genomes_project 1 5751868 5755479 - TEC TEC MGP_129S1SvImJ_T0023286.1 MGP_129S1SvImJ_G0016718.1 mouse_genomes_project 1 173738846 174062419 - MGP_129S1SvImJ_P0023286 Pbx1 protein_coding protein_coding MGP_129S1SvImJ_T0023287.1 MGP_129S1SvImJ_G0016718.1 mouse_genomes_project 1 173775971 174060992 - MGP_129S1SvImJ_P0023287 Pbx1 protein_coding protein_coding MGP_129S1SvImJ_T0023288.1 MGP_129S1SvImJ_G0016718.1 mouse_genomes_project 1 173780723 174060845 - MGP_129S1SvImJ_P0023288 Pbx1 protein_coding protein_coding MGP_129S1SvImJ_T0023289.1 MGP_129S1SvImJ_G0016718.1 mouse_genomes_project 1 173780763 173787054 - Pbx1 protein_coding processed_transcript MGP_129S1SvImJ_T0023290.1 MGP_129S1SvImJ_G0016718.1 mouse_genomes_project 1 173781125 174060596 - MGP_129S1SvImJ_P0023290 Pbx1 protein_coding protein_coding MGP_129S1SvImJ_T0023291.1 MGP_129S1SvImJ_G0016718.1 mouse_genomes_project 1 173805976 174061103 - MGP_129S1SvImJ_P0023291 Pbx1 protein_coding protein_coding MGP_129S1SvImJ_T0023292.1 MGP_129S1SvImJ_G0016718.1 mouse_genomes_project 1 173830815 174060752 - Pbx1 protein_coding retained_intron MGP_129S1SvImJ_T0023293.1 MGP_129S1SvImJ_G0016718.1 mouse_genomes_project 1 174053513 174061103 - Pbx1 protein_coding retained_intron MGP_129S1SvImJ_T0020004.1 MGP_129S1SvImJ_G0016054.1 mouse_genomes_project 1 58400910 58472652 - MGP_129S1SvImJ_P0020004 Fam126b protein_coding protein_coding MGP_129S1SvImJ_T0020005.1 MGP_129S1SvImJ_G0016054.1 mouse_genomes_project 1 58405125 58472595 - MGP_129S1SvImJ_P0020005 Fam126b protein_coding protein_coding MGP_129S1SvImJ_T0020006.1 MGP_129S1SvImJ_G0016054.1 mouse_genomes_project 1 58405847 58444662 - MGP_129S1SvImJ_P0020006 Fam126b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020007.1 MGP_129S1SvImJ_G0016054.1 mouse_genomes_project 1 58407187 58472520 - MGP_129S1SvImJ_P0020007 Fam126b protein_coding protein_coding MGP_129S1SvImJ_T0020008.1 MGP_129S1SvImJ_G0016054.1 mouse_genomes_project 1 58431211 58472604 - MGP_129S1SvImJ_P0020008 Fam126b protein_coding protein_coding MGP_129S1SvImJ_T0020009.1 MGP_129S1SvImJ_G0016054.1 mouse_genomes_project 1 58436357 58472593 - Fam126b protein_coding processed_transcript MGP_129S1SvImJ_T0020010.1 MGP_129S1SvImJ_G0016054.1 mouse_genomes_project 1 58436384 58472606 - Fam126b protein_coding retained_intron MGP_129S1SvImJ_T0020011.1 MGP_129S1SvImJ_G0016054.1 mouse_genomes_project 1 58441140 58443928 - Fam126b protein_coding retained_intron MGP_129S1SvImJ_T0020012.1 MGP_129S1SvImJ_G0016054.1 mouse_genomes_project 1 58444311 58472626 - Fam126b protein_coding retained_intron MGP_129S1SvImJ_T0018963.1 MGP_129S1SvImJ_G0015844.1 mouse_genomes_project 1 11045827 11090541 + MGP_129S1SvImJ_P0018963 Xkr9 protein_coding protein_coding MGP_129S1SvImJ_T0000716.1 MGP_129S1SvImJ_G0000653.1 mouse_genomes_project 1 160987490 160991274 - TEC TEC MGP_129S1SvImJ_T0022506.1 MGP_129S1SvImJ_G0016564.1 mouse_genomes_project 1 148134732 148167107 + MGP_129S1SvImJ_P0022506 Uchl5 protein_coding protein_coding MGP_129S1SvImJ_T0022507.1 MGP_129S1SvImJ_G0016564.1 mouse_genomes_project 1 148134736 148141709 + Uchl5 protein_coding retained_intron MGP_129S1SvImJ_T0022508.1 MGP_129S1SvImJ_G0016564.1 mouse_genomes_project 1 148134741 148167268 + MGP_129S1SvImJ_P0022508 Uchl5 protein_coding protein_coding MGP_129S1SvImJ_T0022509.1 MGP_129S1SvImJ_G0016564.1 mouse_genomes_project 1 148134765 148143796 + Uchl5 protein_coding retained_intron MGP_129S1SvImJ_T0022510.1 MGP_129S1SvImJ_G0016564.1 mouse_genomes_project 1 148134781 148159799 + MGP_129S1SvImJ_P0022510 Uchl5 protein_coding protein_coding MGP_129S1SvImJ_T0022511.1 MGP_129S1SvImJ_G0016564.1 mouse_genomes_project 1 148141091 148153774 + Uchl5 protein_coding retained_intron MGP_129S1SvImJ_T0022512.1 MGP_129S1SvImJ_G0016564.1 mouse_genomes_project 1 148153670 148155999 + Uchl5 protein_coding retained_intron MGP_129S1SvImJ_T0022513.1 MGP_129S1SvImJ_G0016564.1 mouse_genomes_project 1 148153712 148166743 + MGP_129S1SvImJ_P0022513 Uchl5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020031.1 MGP_129S1SvImJ_G0016058.1 mouse_genomes_project 1 58725128 58771896 + MGP_129S1SvImJ_P0020031 Casp8 protein_coding protein_coding MGP_129S1SvImJ_T0020032.1 MGP_129S1SvImJ_G0016058.1 mouse_genomes_project 1 58725231 58771147 + MGP_129S1SvImJ_P0020032 Casp8 protein_coding protein_coding MGP_129S1SvImJ_T0020033.1 MGP_129S1SvImJ_G0016058.1 mouse_genomes_project 1 58735311 58771401 + MGP_129S1SvImJ_P0020033 Casp8 protein_coding protein_coding MGP_129S1SvImJ_T0020034.1 MGP_129S1SvImJ_G0016058.1 mouse_genomes_project 1 58735462 58771147 + MGP_129S1SvImJ_P0020034 Casp8 protein_coding protein_coding MGP_129S1SvImJ_T0020479.1 MGP_129S1SvImJ_G0016144.1 mouse_genomes_project 1 74866494 74867569 + MGP_129S1SvImJ_P0020479 Gpbar1 protein_coding protein_coding MGP_129S1SvImJ_T0100365.1 MGP_129S1SvImJ_G0038432.1 mouse_genomes_project 1 116179565 116179699 - Gm24937 snoRNA snoRNA MGP_129S1SvImJ_T0019072.1 MGP_129S1SvImJ_G0015872.1 mouse_genomes_project 1 18428076 18445571 - MGP_129S1SvImJ_P0019072 Mcm3 protein_coding protein_coding MGP_129S1SvImJ_T0019073.1 MGP_129S1SvImJ_G0015872.1 mouse_genomes_project 1 18428081 18445519 - Mcm3 protein_coding retained_intron MGP_129S1SvImJ_T0019074.1 MGP_129S1SvImJ_G0015872.1 mouse_genomes_project 1 18428114 18428829 - Mcm3 protein_coding retained_intron MGP_129S1SvImJ_T0019075.1 MGP_129S1SvImJ_G0015872.1 mouse_genomes_project 1 18428273 18430025 - Mcm3 protein_coding retained_intron MGP_129S1SvImJ_T0019076.1 MGP_129S1SvImJ_G0015872.1 mouse_genomes_project 1 18429788 18431032 - Mcm3 protein_coding retained_intron MGP_129S1SvImJ_T0018933.1 MGP_129S1SvImJ_G0015838.1 mouse_genomes_project 1 10019306 10185413 + MGP_129S1SvImJ_P0018933 Sulf1 protein_coding protein_coding MGP_129S1SvImJ_T0018934.1 MGP_129S1SvImJ_G0015838.1 mouse_genomes_project 1 10048570 10156308 + Sulf1 protein_coding retained_intron MGP_129S1SvImJ_T0018935.1 MGP_129S1SvImJ_G0015838.1 mouse_genomes_project 1 10050813 10118318 + MGP_129S1SvImJ_P0018935 Sulf1 protein_coding protein_coding MGP_129S1SvImJ_T0018936.1 MGP_129S1SvImJ_G0015838.1 mouse_genomes_project 1 10059472 10118408 + MGP_129S1SvImJ_P0018936 Sulf1 protein_coding protein_coding MGP_129S1SvImJ_T0018937.1 MGP_129S1SvImJ_G0015838.1 mouse_genomes_project 1 10117210 10120587 + Sulf1 protein_coding retained_intron MGP_129S1SvImJ_T0018938.1 MGP_129S1SvImJ_G0015838.1 mouse_genomes_project 1 10118295 10192584 + MGP_129S1SvImJ_P0018938 Sulf1 protein_coding protein_coding MGP_129S1SvImJ_T0018939.1 MGP_129S1SvImJ_G0015838.1 mouse_genomes_project 1 10168103 10172567 + Sulf1 protein_coding retained_intron MGP_129S1SvImJ_T0018940.1 MGP_129S1SvImJ_G0015838.1 mouse_genomes_project 1 10174661 10194147 + MGP_129S1SvImJ_P0018940 Sulf1 protein_coding protein_coding MGP_129S1SvImJ_T0102099.1 MGP_129S1SvImJ_G0039934.1 mouse_genomes_project 1 180131864 180132330 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0020406.1 MGP_129S1SvImJ_G0016127.1 mouse_genomes_project 1 72018785 72090679 - MGP_129S1SvImJ_P0020406 Fn1 protein_coding protein_coding MGP_129S1SvImJ_T0020407.1 MGP_129S1SvImJ_G0016127.1 mouse_genomes_project 1 72018788 72090679 - MGP_129S1SvImJ_P0020407 Fn1 protein_coding protein_coding MGP_129S1SvImJ_T0020408.1 MGP_129S1SvImJ_G0016127.1 mouse_genomes_project 1 72018788 72090679 - MGP_129S1SvImJ_P0020408 Fn1 protein_coding protein_coding MGP_129S1SvImJ_T0020409.1 MGP_129S1SvImJ_G0016127.1 mouse_genomes_project 1 72018788 72090679 - MGP_129S1SvImJ_P0020409 Fn1 protein_coding protein_coding MGP_129S1SvImJ_T0020410.1 MGP_129S1SvImJ_G0016127.1 mouse_genomes_project 1 72018789 72090682 - MGP_129S1SvImJ_P0020410 Fn1 protein_coding protein_coding MGP_129S1SvImJ_T0020411.1 MGP_129S1SvImJ_G0016127.1 mouse_genomes_project 1 72018789 72090679 - MGP_129S1SvImJ_P0020411 Fn1 protein_coding protein_coding MGP_129S1SvImJ_T0020412.1 MGP_129S1SvImJ_G0016127.1 mouse_genomes_project 1 72018789 72090707 - MGP_129S1SvImJ_P0020412 Fn1 protein_coding protein_coding MGP_129S1SvImJ_T0020413.1 MGP_129S1SvImJ_G0016127.1 mouse_genomes_project 1 72018791 72044371 - Fn1 protein_coding retained_intron MGP_129S1SvImJ_T0020414.1 MGP_129S1SvImJ_G0016127.1 mouse_genomes_project 1 72020126 72024337 - Fn1 protein_coding retained_intron MGP_129S1SvImJ_T0020415.1 MGP_129S1SvImJ_G0016127.1 mouse_genomes_project 1 72023362 72033599 - MGP_129S1SvImJ_P0020415 Fn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020416.1 MGP_129S1SvImJ_G0016127.1 mouse_genomes_project 1 72031590 72035607 - MGP_129S1SvImJ_P0020416 Fn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020417.1 MGP_129S1SvImJ_G0016127.1 mouse_genomes_project 1 72033617 72036075 - Fn1 protein_coding retained_intron MGP_129S1SvImJ_T0020418.1 MGP_129S1SvImJ_G0016127.1 mouse_genomes_project 1 72037327 72059143 - Fn1 protein_coding retained_intron MGP_129S1SvImJ_T0020419.1 MGP_129S1SvImJ_G0016127.1 mouse_genomes_project 1 72064255 72077276 - MGP_129S1SvImJ_P0020419 Fn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020420.1 MGP_129S1SvImJ_G0016127.1 mouse_genomes_project 1 72078812 72090668 - MGP_129S1SvImJ_P0020420 Fn1 protein_coding protein_coding MGP_129S1SvImJ_T0020421.1 MGP_129S1SvImJ_G0016127.1 mouse_genomes_project 1 72081946 72090679 - Fn1 protein_coding retained_intron MGP_129S1SvImJ_T0020422.1 MGP_129S1SvImJ_G0016127.1 mouse_genomes_project 1 72083112 72090679 - MGP_129S1SvImJ_P0020422 Fn1 protein_coding protein_coding MGP_129S1SvImJ_T0012005.1 MGP_129S1SvImJ_G0010094.1 mouse_genomes_project 1 42938756 42939572 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002988.1 MGP_129S1SvImJ_G0002807.1 mouse_genomes_project 1 187436229 187442300 - 2210411M09Rik antisense antisense MGP_129S1SvImJ_T0003006.1 MGP_129S1SvImJ_G0002823.1 mouse_genomes_project 1 197129012 197178778 + Prox1os antisense antisense MGP_129S1SvImJ_T0022272.1 MGP_129S1SvImJ_G0016516.1 mouse_genomes_project 1 138868673 138880048 + MGP_129S1SvImJ_P0022272 Ptpn7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0022273.1 MGP_129S1SvImJ_G0016516.1 mouse_genomes_project 1 138870073 138876774 + Ptpn7 protein_coding retained_intron MGP_129S1SvImJ_T0020894.1 MGP_129S1SvImJ_G0016213.1 mouse_genomes_project 1 83141761 83200925 - MGP_129S1SvImJ_P0020894 Irs1 protein_coding protein_coding MGP_129S1SvImJ_T0011984.1 MGP_129S1SvImJ_G0010073.1 mouse_genomes_project 1 33178344 33178699 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005773.1 MGP_129S1SvImJ_G0004849.1 mouse_genomes_project 1 61698277 61703156 - 4930587A21Rik lincRNA lincRNA MGP_129S1SvImJ_T0023929.1 MGP_129S1SvImJ_G0016880.1 mouse_genomes_project 1 187460319 187480218 - MGP_129S1SvImJ_P0023929 Ephx1 protein_coding protein_coding MGP_129S1SvImJ_T0023930.1 MGP_129S1SvImJ_G0016880.1 mouse_genomes_project 1 187473653 187501619 - MGP_129S1SvImJ_P0023930 Ephx1 protein_coding protein_coding MGP_129S1SvImJ_T0023931.1 MGP_129S1SvImJ_G0016880.1 mouse_genomes_project 1 187473653 187501619 - MGP_129S1SvImJ_P0023931 Ephx1 protein_coding protein_coding MGP_129S1SvImJ_T0023932.1 MGP_129S1SvImJ_G0016880.1 mouse_genomes_project 1 187480196 187506279 - MGP_129S1SvImJ_P0023932 Ephx1 protein_coding protein_coding MGP_129S1SvImJ_T0005988.1 MGP_129S1SvImJ_G0005019.1 mouse_genomes_project 1 169906560 169908108 + Gm32391 lincRNA lincRNA MGP_129S1SvImJ_T0012181.1 MGP_129S1SvImJ_G0010270.1 mouse_genomes_project 1 106719891 106720700 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012028.1 MGP_129S1SvImJ_G0010117.1 mouse_genomes_project 1 47895007 47895220 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000376.1 MGP_129S1SvImJ_G0000318.1 mouse_genomes_project 1 349014 351831 - TEC TEC MGP_129S1SvImJ_T0019159.1 MGP_129S1SvImJ_G0015895.1 mouse_genomes_project 1 28991811 29069884 - MGP_129S1SvImJ_P0019159 Phf3 protein_coding protein_coding MGP_129S1SvImJ_T0019160.1 MGP_129S1SvImJ_G0015895.1 mouse_genomes_project 1 28991814 29058320 - MGP_129S1SvImJ_P0019160 Phf3 protein_coding protein_coding MGP_129S1SvImJ_T0019161.1 MGP_129S1SvImJ_G0015895.1 mouse_genomes_project 1 28993018 29000681 - MGP_129S1SvImJ_P0019161 Phf3 protein_coding protein_coding MGP_129S1SvImJ_T0019162.1 MGP_129S1SvImJ_G0015895.1 mouse_genomes_project 1 28995701 28999074 - Phf3 protein_coding retained_intron MGP_129S1SvImJ_T0019163.1 MGP_129S1SvImJ_G0015895.1 mouse_genomes_project 1 29001872 29003504 - Phf3 protein_coding retained_intron MGP_129S1SvImJ_T0019164.1 MGP_129S1SvImJ_G0015895.1 mouse_genomes_project 1 29003539 29069994 - Phf3 protein_coding retained_intron MGP_129S1SvImJ_T0019165.1 MGP_129S1SvImJ_G0015895.1 mouse_genomes_project 1 29005283 29070220 - Phf3 protein_coding retained_intron MGP_129S1SvImJ_T0019166.1 MGP_129S1SvImJ_G0015895.1 mouse_genomes_project 1 29013307 29070103 - MGP_129S1SvImJ_P0019166 Phf3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019167.1 MGP_129S1SvImJ_G0015895.1 mouse_genomes_project 1 29014139 29016929 - Phf3 protein_coding retained_intron MGP_129S1SvImJ_T0019168.1 MGP_129S1SvImJ_G0015895.1 mouse_genomes_project 1 29017501 29058134 - Phf3 protein_coding processed_transcript MGP_129S1SvImJ_T0019169.1 MGP_129S1SvImJ_G0015895.1 mouse_genomes_project 1 29022510 29023823 - Phf3 protein_coding retained_intron MGP_129S1SvImJ_T0019170.1 MGP_129S1SvImJ_G0015895.1 mouse_genomes_project 1 29024284 29070193 - MGP_129S1SvImJ_P0019170 Phf3 protein_coding protein_coding MGP_129S1SvImJ_T0019171.1 MGP_129S1SvImJ_G0015895.1 mouse_genomes_project 1 29058133 29069551 - MGP_129S1SvImJ_P0019171 Phf3 protein_coding protein_coding MGP_129S1SvImJ_T0019172.1 MGP_129S1SvImJ_G0015895.1 mouse_genomes_project 1 29068951 29069774 - Phf3 protein_coding retained_intron MGP_129S1SvImJ_T0000552.1 MGP_129S1SvImJ_G0000491.1 mouse_genomes_project 1 80563929 80565754 + TEC TEC MGP_129S1SvImJ_T0002877.1 MGP_129S1SvImJ_G0002722.1 mouse_genomes_project 1 94541932 94558941 - 9430060I03Rik antisense antisense MGP_129S1SvImJ_T0005892.1 MGP_129S1SvImJ_G0004944.1 mouse_genomes_project 1 122038763 122060226 - Gm29456 lincRNA lincRNA MGP_129S1SvImJ_T0019692.1 MGP_129S1SvImJ_G0015995.1 mouse_genomes_project 1 44970859 44971608 - Gm5269 protein_coding translated_processed_pseudogene MGP_129S1SvImJ_T0019693.1 MGP_129S1SvImJ_G0015995.1 mouse_genomes_project 1 44971275 44971413 - MGP_129S1SvImJ_P0019693 Gm5269 protein_coding protein_coding MGP_129S1SvImJ_T0020820.1 MGP_129S1SvImJ_G0016196.1 mouse_genomes_project 1 78810189 78911788 - MGP_129S1SvImJ_P0020820 Pax3 protein_coding protein_coding MGP_129S1SvImJ_T0020821.1 MGP_129S1SvImJ_G0016196.1 mouse_genomes_project 1 78810192 78912084 - MGP_129S1SvImJ_P0020821 Pax3 protein_coding protein_coding MGP_129S1SvImJ_T0020822.1 MGP_129S1SvImJ_G0016196.1 mouse_genomes_project 1 78896687 78912063 - Pax3 protein_coding processed_transcript MGP_129S1SvImJ_T0023820.1 MGP_129S1SvImJ_G0016861.1 mouse_genomes_project 1 186039128 186061122 + MGP_129S1SvImJ_P0023820 Sccpdh protein_coding protein_coding MGP_129S1SvImJ_T0023821.1 MGP_129S1SvImJ_G0016861.1 mouse_genomes_project 1 186039128 186061122 + MGP_129S1SvImJ_P0023821 Sccpdh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023822.1 MGP_129S1SvImJ_G0016861.1 mouse_genomes_project 1 186039178 186049746 + Sccpdh protein_coding retained_intron MGP_129S1SvImJ_T0023823.1 MGP_129S1SvImJ_G0016861.1 mouse_genomes_project 1 186052796 186060758 + MGP_129S1SvImJ_P0023823 Sccpdh protein_coding protein_coding MGP_129S1SvImJ_T0023824.1 MGP_129S1SvImJ_G0016861.1 mouse_genomes_project 1 186052825 186058424 + MGP_129S1SvImJ_P0023824 Sccpdh protein_coding protein_coding MGP_129S1SvImJ_T0023825.1 MGP_129S1SvImJ_G0016861.1 mouse_genomes_project 1 186057777 186060766 + Sccpdh protein_coding retained_intron MGP_129S1SvImJ_T0023457.1 MGP_129S1SvImJ_G0016755.1 mouse_genomes_project 1 177119655 177136531 + MGP_129S1SvImJ_P0023457 Dedd protein_coding protein_coding MGP_129S1SvImJ_T0023458.1 MGP_129S1SvImJ_G0016755.1 mouse_genomes_project 1 177119909 177136525 + MGP_129S1SvImJ_P0023458 Dedd protein_coding protein_coding MGP_129S1SvImJ_T0023459.1 MGP_129S1SvImJ_G0016755.1 mouse_genomes_project 1 177119918 177135886 + MGP_129S1SvImJ_P0023459 Dedd protein_coding protein_coding MGP_129S1SvImJ_T0023460.1 MGP_129S1SvImJ_G0016755.1 mouse_genomes_project 1 177120076 177134499 + MGP_129S1SvImJ_P0023460 Dedd protein_coding protein_coding MGP_129S1SvImJ_T0023461.1 MGP_129S1SvImJ_G0016755.1 mouse_genomes_project 1 177120117 177135154 + MGP_129S1SvImJ_P0023461 Dedd protein_coding protein_coding MGP_129S1SvImJ_T0023462.1 MGP_129S1SvImJ_G0016755.1 mouse_genomes_project 1 177120480 177132614 + MGP_129S1SvImJ_P0023462 Dedd protein_coding protein_coding MGP_129S1SvImJ_T0023463.1 MGP_129S1SvImJ_G0016755.1 mouse_genomes_project 1 177120757 177132543 + MGP_129S1SvImJ_P0023463 Dedd protein_coding protein_coding MGP_129S1SvImJ_T0023464.1 MGP_129S1SvImJ_G0016755.1 mouse_genomes_project 1 177121815 177135820 + MGP_129S1SvImJ_P0023464 Dedd protein_coding protein_coding MGP_129S1SvImJ_T0023465.1 MGP_129S1SvImJ_G0016755.1 mouse_genomes_project 1 177131013 177134336 + Dedd protein_coding retained_intron MGP_129S1SvImJ_T0023466.1 MGP_129S1SvImJ_G0016755.1 mouse_genomes_project 1 177132187 177134429 + MGP_129S1SvImJ_P0023466 Dedd protein_coding protein_coding MGP_129S1SvImJ_T0020390.1 MGP_129S1SvImJ_G0016123.1 mouse_genomes_project 1 71128817 71300394 + MGP_129S1SvImJ_P0020390 Vwc2l protein_coding protein_coding MGP_129S1SvImJ_T0020391.1 MGP_129S1SvImJ_G0016123.1 mouse_genomes_project 1 71128854 71135305 + Vwc2l protein_coding retained_intron MGP_129S1SvImJ_T0020392.1 MGP_129S1SvImJ_G0016123.1 mouse_genomes_project 1 71129004 71300379 + MGP_129S1SvImJ_P0020392 Vwc2l protein_coding protein_coding MGP_129S1SvImJ_T0020393.1 MGP_129S1SvImJ_G0016123.1 mouse_genomes_project 1 71129025 71297486 + MGP_129S1SvImJ_P0020393 Vwc2l protein_coding protein_coding MGP_129S1SvImJ_T0022980.1 MGP_129S1SvImJ_G0016649.1 mouse_genomes_project 1 166343798 166387967 - Klhl20 protein_coding retained_intron MGP_129S1SvImJ_T0022981.1 MGP_129S1SvImJ_G0016649.1 mouse_genomes_project 1 166343798 166387967 - MGP_129S1SvImJ_P0022981 Klhl20 protein_coding protein_coding MGP_129S1SvImJ_T0022982.1 MGP_129S1SvImJ_G0016649.1 mouse_genomes_project 1 166343803 166387884 - MGP_129S1SvImJ_P0022982 Klhl20 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022983.1 MGP_129S1SvImJ_G0016649.1 mouse_genomes_project 1 166343821 166351070 - MGP_129S1SvImJ_P0022983 Klhl20 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022984.1 MGP_129S1SvImJ_G0016649.1 mouse_genomes_project 1 166351889 166387967 - Klhl20 protein_coding retained_intron MGP_129S1SvImJ_T0022985.1 MGP_129S1SvImJ_G0016649.1 mouse_genomes_project 1 166355441 166359654 - Klhl20 protein_coding retained_intron MGP_129S1SvImJ_T0022986.1 MGP_129S1SvImJ_G0016649.1 mouse_genomes_project 1 166363023 166387898 - Klhl20 protein_coding retained_intron MGP_129S1SvImJ_T0000693.1 MGP_129S1SvImJ_G0000630.1 mouse_genomes_project 1 147059600 147059734 + TEC TEC MGP_129S1SvImJ_T0000653.1 MGP_129S1SvImJ_G0000592.1 mouse_genomes_project 1 135363126 135365037 + TEC TEC MGP_129S1SvImJ_T0020985.1 MGP_129S1SvImJ_G0016230.1 mouse_genomes_project 1 85958241 85993925 - MGP_129S1SvImJ_P0020985 Slc16a14 protein_coding protein_coding MGP_129S1SvImJ_T0020986.1 MGP_129S1SvImJ_G0016230.1 mouse_genomes_project 1 85984350 85993648 - MGP_129S1SvImJ_P0020986 Slc16a14 protein_coding protein_coding MGP_129S1SvImJ_T0002834.1 MGP_129S1SvImJ_G0002689.1 mouse_genomes_project 1 59502571 59519779 - Gm28411 antisense antisense MGP_129S1SvImJ_T0002836.1 MGP_129S1SvImJ_G0002689.1 mouse_genomes_project 1 59513203 59520512 - Gm28411 antisense antisense MGP_129S1SvImJ_T0000739.1 MGP_129S1SvImJ_G0000676.1 mouse_genomes_project 1 165867522 165869812 - TEC TEC MGP_129S1SvImJ_T0022352.1 MGP_129S1SvImJ_G0016531.1 mouse_genomes_project 1 139658922 139707665 - MGP_129S1SvImJ_P0022352 Pkp1 protein_coding protein_coding MGP_129S1SvImJ_T0022353.1 MGP_129S1SvImJ_G0016531.1 mouse_genomes_project 1 139660476 139707578 - MGP_129S1SvImJ_P0022353 Pkp1 protein_coding protein_coding MGP_129S1SvImJ_T0022354.1 MGP_129S1SvImJ_G0016531.1 mouse_genomes_project 1 139660904 139707600 - MGP_129S1SvImJ_P0022354 Pkp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022355.1 MGP_129S1SvImJ_G0016531.1 mouse_genomes_project 1 139664856 139665813 - Pkp1 protein_coding retained_intron MGP_129S1SvImJ_T0000502.1 MGP_129S1SvImJ_G0000441.1 mouse_genomes_project 1 55284267 55285863 + TEC TEC MGP_129S1SvImJ_T0019740.1 MGP_129S1SvImJ_G0016006.1 mouse_genomes_project 1 51628849 51665331 + MGP_129S1SvImJ_P0019740 Stat1 protein_coding protein_coding MGP_129S1SvImJ_T0019741.1 MGP_129S1SvImJ_G0016006.1 mouse_genomes_project 1 51628864 51671784 + MGP_129S1SvImJ_P0019741 Stat1 protein_coding protein_coding MGP_129S1SvImJ_T0019742.1 MGP_129S1SvImJ_G0016006.1 mouse_genomes_project 1 51628899 51665331 + MGP_129S1SvImJ_P0019742 Stat1 protein_coding protein_coding MGP_129S1SvImJ_T0019743.1 MGP_129S1SvImJ_G0016006.1 mouse_genomes_project 1 51628901 51670926 + MGP_129S1SvImJ_P0019743 Stat1 protein_coding protein_coding MGP_129S1SvImJ_T0019744.1 MGP_129S1SvImJ_G0016006.1 mouse_genomes_project 1 51628907 51642564 + MGP_129S1SvImJ_P0019744 Stat1 protein_coding protein_coding MGP_129S1SvImJ_T0019745.1 MGP_129S1SvImJ_G0016006.1 mouse_genomes_project 1 51628958 51665250 + MGP_129S1SvImJ_P0019745 Stat1 protein_coding protein_coding MGP_129S1SvImJ_T0019746.1 MGP_129S1SvImJ_G0016006.1 mouse_genomes_project 1 51628968 51629804 + Stat1 protein_coding retained_intron MGP_129S1SvImJ_T0019747.1 MGP_129S1SvImJ_G0016006.1 mouse_genomes_project 1 51628981 51647783 + Stat1 protein_coding retained_intron MGP_129S1SvImJ_T0019748.1 MGP_129S1SvImJ_G0016006.1 mouse_genomes_project 1 51629033 51670649 + MGP_129S1SvImJ_P0019748 Stat1 protein_coding protein_coding MGP_129S1SvImJ_T0019749.1 MGP_129S1SvImJ_G0016006.1 mouse_genomes_project 1 51660034 51662330 + Stat1 protein_coding retained_intron MGP_129S1SvImJ_T0019750.1 MGP_129S1SvImJ_G0016006.1 mouse_genomes_project 1 51660188 51671782 + MGP_129S1SvImJ_P0019750 Stat1 protein_coding protein_coding MGP_129S1SvImJ_T0019751.1 MGP_129S1SvImJ_G0016006.1 mouse_genomes_project 1 51662183 51669479 + MGP_129S1SvImJ_P0019751 Stat1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0102070.1 MGP_129S1SvImJ_G0039905.1 mouse_genomes_project 1 98933995 99065459 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0000720.1 MGP_129S1SvImJ_G0000657.1 mouse_genomes_project 1 161649499 161649899 + TEC TEC MGP_129S1SvImJ_T0099027.1 MGP_129S1SvImJ_G0037099.1 mouse_genomes_project 1 20808485 21011419 - Gm29506 sense_overlapping sense_overlapping MGP_129S1SvImJ_T0006011.1 MGP_129S1SvImJ_G0005038.1 mouse_genomes_project 1 176734200 176739516 + Gm10522 lincRNA lincRNA MGP_129S1SvImJ_T0021653.1 MGP_129S1SvImJ_G0016384.1 mouse_genomes_project 1 109850922 109869187 + MGP_129S1SvImJ_P0021653 Serpinb8 protein_coding protein_coding MGP_129S1SvImJ_T0021654.1 MGP_129S1SvImJ_G0016384.1 mouse_genomes_project 1 109850922 109871381 + MGP_129S1SvImJ_P0021654 Serpinb8 protein_coding protein_coding MGP_129S1SvImJ_T0021655.1 MGP_129S1SvImJ_G0016384.1 mouse_genomes_project 1 109850962 109866250 + Serpinb8 protein_coding retained_intron MGP_129S1SvImJ_T0021656.1 MGP_129S1SvImJ_G0016384.1 mouse_genomes_project 1 109865979 109867428 + MGP_129S1SvImJ_P0021656 Serpinb8 protein_coding protein_coding MGP_129S1SvImJ_T0009509.1 MGP_129S1SvImJ_G0007625.1 mouse_genomes_project 1 67911311 67911389 + Gm22548 miRNA miRNA MGP_129S1SvImJ_T0022146.1 MGP_129S1SvImJ_G0016487.1 mouse_genomes_project 1 136955842 136965407 - MGP_129S1SvImJ_P0022146 Sox13 protein_coding protein_coding MGP_129S1SvImJ_T0022147.1 MGP_129S1SvImJ_G0016487.1 mouse_genomes_project 1 136956169 136957699 - Sox13 protein_coding retained_intron MGP_129S1SvImJ_T0022148.1 MGP_129S1SvImJ_G0016487.1 mouse_genomes_project 1 136956724 136958607 - Sox13 protein_coding retained_intron MGP_129S1SvImJ_T0098791.1 MGP_129S1SvImJ_G0036875.1 mouse_genomes_project 1 148135102 148138768 + Gm29170 sense_intronic sense_intronic MGP_129S1SvImJ_T0005788.1 MGP_129S1SvImJ_G0004861.1 mouse_genomes_project 1 68307417 68308939 + Gm15671 lincRNA lincRNA MGP_129S1SvImJ_T0012174.1 MGP_129S1SvImJ_G0010263.1 mouse_genomes_project 1 103289376 103290094 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019683.1 MGP_129S1SvImJ_G0015994.1 mouse_genomes_project 1 44870041 44899266 + MGP_129S1SvImJ_P0019683 Wdr75 protein_coding protein_coding MGP_129S1SvImJ_T0019684.1 MGP_129S1SvImJ_G0015994.1 mouse_genomes_project 1 44870324 44899251 + Wdr75 protein_coding retained_intron MGP_129S1SvImJ_T0019685.1 MGP_129S1SvImJ_G0015994.1 mouse_genomes_project 1 44870378 44877092 + Wdr75 protein_coding retained_intron MGP_129S1SvImJ_T0019686.1 MGP_129S1SvImJ_G0015994.1 mouse_genomes_project 1 44870382 44878665 + MGP_129S1SvImJ_P0019686 Wdr75 protein_coding protein_coding MGP_129S1SvImJ_T0019687.1 MGP_129S1SvImJ_G0015994.1 mouse_genomes_project 1 44876725 44899162 + Wdr75 protein_coding processed_transcript MGP_129S1SvImJ_T0019688.1 MGP_129S1SvImJ_G0015994.1 mouse_genomes_project 1 44878422 44880192 + Wdr75 protein_coding processed_transcript MGP_129S1SvImJ_T0019689.1 MGP_129S1SvImJ_G0015994.1 mouse_genomes_project 1 44890330 44899266 + Wdr75 protein_coding retained_intron MGP_129S1SvImJ_T0019690.1 MGP_129S1SvImJ_G0015994.1 mouse_genomes_project 1 44897915 44899160 + Wdr75 protein_coding retained_intron MGP_129S1SvImJ_T0019691.1 MGP_129S1SvImJ_G0015994.1 mouse_genomes_project 1 44898207 44899263 + MGP_129S1SvImJ_P0019691 Wdr75 protein_coding protein_coding MGP_129S1SvImJ_T0023485.1 MGP_129S1SvImJ_G0016761.1 mouse_genomes_project 1 177212763 177219597 + MGP_129S1SvImJ_P0023485 Usf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023486.1 MGP_129S1SvImJ_G0016761.1 mouse_genomes_project 1 177212763 177220605 + MGP_129S1SvImJ_P0023486 Usf1 protein_coding protein_coding MGP_129S1SvImJ_T0023487.1 MGP_129S1SvImJ_G0016761.1 mouse_genomes_project 1 177212763 177218449 + MGP_129S1SvImJ_P0023487 Usf1 protein_coding protein_coding MGP_129S1SvImJ_T0023488.1 MGP_129S1SvImJ_G0016761.1 mouse_genomes_project 1 177212776 177217205 + Usf1 protein_coding processed_transcript MGP_129S1SvImJ_T0023489.1 MGP_129S1SvImJ_G0016761.1 mouse_genomes_project 1 177212784 177218832 + Usf1 protein_coding retained_intron MGP_129S1SvImJ_T0023490.1 MGP_129S1SvImJ_G0016761.1 mouse_genomes_project 1 177212824 177217081 + Usf1 protein_coding retained_intron MGP_129S1SvImJ_T0023491.1 MGP_129S1SvImJ_G0016761.1 mouse_genomes_project 1 177212834 177220221 + MGP_129S1SvImJ_P0023491 Usf1 protein_coding protein_coding MGP_129S1SvImJ_T0023492.1 MGP_129S1SvImJ_G0016761.1 mouse_genomes_project 1 177213131 177220207 + MGP_129S1SvImJ_P0023492 Usf1 protein_coding protein_coding MGP_129S1SvImJ_T0023493.1 MGP_129S1SvImJ_G0016761.1 mouse_genomes_project 1 177218805 177219406 + Usf1 protein_coding retained_intron MGP_129S1SvImJ_T0023494.1 MGP_129S1SvImJ_G0016761.1 mouse_genomes_project 1 177218935 177219907 + Usf1 protein_coding retained_intron MGP_129S1SvImJ_T0021225.1 MGP_129S1SvImJ_G0016286.1 mouse_genomes_project 1 89830637 89849886 + MGP_129S1SvImJ_P0021225 Spp2 protein_coding protein_coding MGP_129S1SvImJ_T0021226.1 MGP_129S1SvImJ_G0016286.1 mouse_genomes_project 1 89830893 89849882 + MGP_129S1SvImJ_P0021226 Spp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019810.1 MGP_129S1SvImJ_G0016016.1 mouse_genomes_project 1 52720137 52840595 - MGP_129S1SvImJ_P0019810 Pms1 protein_coding protein_coding MGP_129S1SvImJ_T0019811.1 MGP_129S1SvImJ_G0016016.1 mouse_genomes_project 1 52728031 52840594 - MGP_129S1SvImJ_P0019811 Pms1 protein_coding protein_coding MGP_129S1SvImJ_T0019812.1 MGP_129S1SvImJ_G0016016.1 mouse_genomes_project 1 52796270 52840544 - Pms1 protein_coding processed_transcript MGP_129S1SvImJ_T0019813.1 MGP_129S1SvImJ_G0016016.1 mouse_genomes_project 1 52803138 52840552 - MGP_129S1SvImJ_P0019813 Pms1 protein_coding protein_coding MGP_129S1SvImJ_T0019814.1 MGP_129S1SvImJ_G0016016.1 mouse_genomes_project 1 52814788 52822824 - MGP_129S1SvImJ_P0019814 Pms1 protein_coding protein_coding MGP_129S1SvImJ_T0019815.1 MGP_129S1SvImJ_G0016016.1 mouse_genomes_project 1 52814810 52840592 - MGP_129S1SvImJ_P0019815 Pms1 protein_coding protein_coding MGP_129S1SvImJ_T0019816.1 MGP_129S1SvImJ_G0016016.1 mouse_genomes_project 1 52822362 52840592 - MGP_129S1SvImJ_P0019816 Pms1 protein_coding protein_coding MGP_129S1SvImJ_T0019817.1 MGP_129S1SvImJ_G0016016.1 mouse_genomes_project 1 52838869 52840592 - Pms1 protein_coding retained_intron MGP_129S1SvImJ_T0005783.1 MGP_129S1SvImJ_G0004856.1 mouse_genomes_project 1 64364332 64479472 - Gm28981 lincRNA lincRNA MGP_129S1SvImJ_T0021775.1 MGP_129S1SvImJ_G0016407.1 mouse_genomes_project 1 123286955 123317302 - MGP_129S1SvImJ_P0021775 Marco protein_coding protein_coding MGP_129S1SvImJ_T0021776.1 MGP_129S1SvImJ_G0016407.1 mouse_genomes_project 1 123303200 123317034 - MGP_129S1SvImJ_P0021776 Marco protein_coding protein_coding MGP_129S1SvImJ_T0005743.1 MGP_129S1SvImJ_G0004825.1 mouse_genomes_project 1 50297789 50299876 + Gm28321 lincRNA lincRNA MGP_129S1SvImJ_T0102069.1 MGP_129S1SvImJ_G0039904.1 mouse_genomes_project 1 94187620 94187732 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0021323.1 MGP_129S1SvImJ_G0016308.1 mouse_genomes_project 1 92916395 92940948 - MGP_129S1SvImJ_P0021323 Ilkap protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021324.1 MGP_129S1SvImJ_G0016308.1 mouse_genomes_project 1 92916399 92926887 - MGP_129S1SvImJ_P0021324 Ilkap protein_coding protein_coding MGP_129S1SvImJ_T0021325.1 MGP_129S1SvImJ_G0016308.1 mouse_genomes_project 1 92918365 92941031 - MGP_129S1SvImJ_P0021325 Ilkap protein_coding protein_coding MGP_129S1SvImJ_T0021326.1 MGP_129S1SvImJ_G0016308.1 mouse_genomes_project 1 92918366 92941003 - Ilkap protein_coding retained_intron MGP_129S1SvImJ_T0021327.1 MGP_129S1SvImJ_G0016308.1 mouse_genomes_project 1 92918493 92926834 - MGP_129S1SvImJ_P0021327 Ilkap protein_coding protein_coding MGP_129S1SvImJ_T0021328.1 MGP_129S1SvImJ_G0016308.1 mouse_genomes_project 1 92918545 92921452 - Ilkap protein_coding retained_intron MGP_129S1SvImJ_T0021329.1 MGP_129S1SvImJ_G0016308.1 mouse_genomes_project 1 92918588 92941041 - MGP_129S1SvImJ_P0021329 Ilkap protein_coding protein_coding MGP_129S1SvImJ_T0021330.1 MGP_129S1SvImJ_G0016308.1 mouse_genomes_project 1 92918589 92941049 - MGP_129S1SvImJ_P0021330 Ilkap protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021331.1 MGP_129S1SvImJ_G0016308.1 mouse_genomes_project 1 92923299 92941063 - Ilkap protein_coding processed_transcript MGP_129S1SvImJ_T0021332.1 MGP_129S1SvImJ_G0016308.1 mouse_genomes_project 1 92926885 92941033 - MGP_129S1SvImJ_P0021332 Ilkap protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0021333.1 MGP_129S1SvImJ_G0016308.1 mouse_genomes_project 1 92927515 92931065 - Ilkap protein_coding retained_intron MGP_129S1SvImJ_T0021334.1 MGP_129S1SvImJ_G0016308.1 mouse_genomes_project 1 92927604 92941026 - MGP_129S1SvImJ_P0021334 Ilkap protein_coding protein_coding MGP_129S1SvImJ_T0021335.1 MGP_129S1SvImJ_G0016308.1 mouse_genomes_project 1 92932494 92941042 - Ilkap protein_coding retained_intron MGP_129S1SvImJ_T0102053.1 MGP_129S1SvImJ_G0039888.1 mouse_genomes_project 1 65645373 65645645 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0019454.1 MGP_129S1SvImJ_G0015945.1 mouse_genomes_project 1 36554589 36565798 - MGP_129S1SvImJ_P0019454 Lyg2 protein_coding protein_coding MGP_129S1SvImJ_T0000666.1 MGP_129S1SvImJ_G0000604.1 mouse_genomes_project 1 139293881 139296181 - TEC TEC MGP_129S1SvImJ_T0012328.1 MGP_129S1SvImJ_G0010417.1 mouse_genomes_project 1 167968953 167969664 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019183.1 MGP_129S1SvImJ_G0015899.1 mouse_genomes_project 1 29464443 29465896 + MGP_129S1SvImJ_P0019183 Pih1d3 protein_coding protein_coding MGP_129S1SvImJ_T0023943.1 MGP_129S1SvImJ_G0016884.1 mouse_genomes_project 1 187673403 187713881 - MGP_129S1SvImJ_P0023943 Wdr26 protein_coding protein_coding MGP_129S1SvImJ_T0023944.1 MGP_129S1SvImJ_G0016884.1 mouse_genomes_project 1 187673407 187713792 - MGP_129S1SvImJ_P0023944 Wdr26 protein_coding protein_coding MGP_129S1SvImJ_T0023945.1 MGP_129S1SvImJ_G0016884.1 mouse_genomes_project 1 187677268 187713755 - MGP_129S1SvImJ_P0023945 Wdr26 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023946.1 MGP_129S1SvImJ_G0016884.1 mouse_genomes_project 1 187677846 187684438 - MGP_129S1SvImJ_P0023946 Wdr26 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023947.1 MGP_129S1SvImJ_G0016884.1 mouse_genomes_project 1 187680578 187683911 - MGP_129S1SvImJ_P0023947 Wdr26 protein_coding protein_coding MGP_129S1SvImJ_T0023948.1 MGP_129S1SvImJ_G0016884.1 mouse_genomes_project 1 187682478 187684568 - Wdr26 protein_coding processed_transcript MGP_129S1SvImJ_T0023949.1 MGP_129S1SvImJ_G0016884.1 mouse_genomes_project 1 187688500 187693878 - Wdr26 protein_coding retained_intron MGP_129S1SvImJ_T0023950.1 MGP_129S1SvImJ_G0016884.1 mouse_genomes_project 1 187701311 187705700 - Wdr26 protein_coding retained_intron MGP_129S1SvImJ_T0098432.1 MGP_129S1SvImJ_G0036517.1 mouse_genomes_project 1 192864007 192864113 + Gm23821 rRNA rRNA MGP_129S1SvImJ_T0000827.1 MGP_129S1SvImJ_G0000761.1 mouse_genomes_project 1 201804775 201806631 + TEC TEC MGP_129S1SvImJ_T0021089.1 MGP_129S1SvImJ_G0016256.1 mouse_genomes_project 1 88459502 88461678 + Akp3 protein_coding retained_intron MGP_129S1SvImJ_T0021090.1 MGP_129S1SvImJ_G0016256.1 mouse_genomes_project 1 88459537 88462442 + MGP_129S1SvImJ_P0021090 Akp3 protein_coding protein_coding MGP_129S1SvImJ_T0000404.1 MGP_129S1SvImJ_G0000346.1 mouse_genomes_project 1 10420543 10421094 - TEC TEC MGP_129S1SvImJ_T0012193.1 MGP_129S1SvImJ_G0010282.1 mouse_genomes_project 1 110203563 110203749 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021376.1 MGP_129S1SvImJ_G0016317.1 mouse_genomes_project 1 94078282 94080164 - MGP_129S1SvImJ_P0021376 Olfr1416 protein_coding protein_coding MGP_129S1SvImJ_T0021377.1 MGP_129S1SvImJ_G0016317.1 mouse_genomes_project 1 94078282 94080143 - MGP_129S1SvImJ_P0021377 Olfr1416 protein_coding protein_coding MGP_129S1SvImJ_T0012338.1 MGP_129S1SvImJ_G0010427.1 mouse_genomes_project 1 171563066 171563419 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005958.1 MGP_129S1SvImJ_G0004997.1 mouse_genomes_project 1 156497115 156503186 - 2810414N06Rik lincRNA lincRNA MGP_129S1SvImJ_T0023553.1 MGP_129S1SvImJ_G0016778.1 mouse_genomes_project 1 177976997 177987426 + MGP_129S1SvImJ_P0023553 Pex19 protein_coding protein_coding MGP_129S1SvImJ_T0023554.1 MGP_129S1SvImJ_G0016778.1 mouse_genomes_project 1 177976998 177981240 + Pex19 protein_coding retained_intron MGP_129S1SvImJ_T0023555.1 MGP_129S1SvImJ_G0016778.1 mouse_genomes_project 1 177977004 177990255 + MGP_129S1SvImJ_P0023555 Pex19 protein_coding protein_coding MGP_129S1SvImJ_T0023556.1 MGP_129S1SvImJ_G0016778.1 mouse_genomes_project 1 177977015 177980406 + Pex19 protein_coding retained_intron MGP_129S1SvImJ_T0023557.1 MGP_129S1SvImJ_G0016778.1 mouse_genomes_project 1 177977015 177979133 + Pex19 protein_coding retained_intron MGP_129S1SvImJ_T0023558.1 MGP_129S1SvImJ_G0016778.1 mouse_genomes_project 1 177986102 177986843 + Pex19 protein_coding retained_intron MGP_129S1SvImJ_T0023146.1 MGP_129S1SvImJ_G0016685.1 mouse_genomes_project 1 169881029 169902416 - MGP_129S1SvImJ_P0023146 Atp1b1 protein_coding protein_coding MGP_129S1SvImJ_T0023147.1 MGP_129S1SvImJ_G0016685.1 mouse_genomes_project 1 169885379 169887640 - Atp1b1 protein_coding processed_transcript MGP_129S1SvImJ_T0023148.1 MGP_129S1SvImJ_G0016685.1 mouse_genomes_project 1 169885379 169897728 - MGP_129S1SvImJ_P0023148 Atp1b1 protein_coding protein_coding MGP_129S1SvImJ_T0023149.1 MGP_129S1SvImJ_G0016685.1 mouse_genomes_project 1 169897212 169902083 - Atp1b1 protein_coding retained_intron MGP_129S1SvImJ_T0024139.1 MGP_129S1SvImJ_G0016926.1 mouse_genomes_project 1 195845779 195883715 - MGP_129S1SvImJ_P0024139 Kctd3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024140.1 MGP_129S1SvImJ_G0016926.1 mouse_genomes_project 1 195845779 195883727 - MGP_129S1SvImJ_P0024140 Kctd3 protein_coding protein_coding MGP_129S1SvImJ_T0024141.1 MGP_129S1SvImJ_G0016926.1 mouse_genomes_project 1 195846935 195849263 - Kctd3 protein_coding retained_intron MGP_129S1SvImJ_T0024142.1 MGP_129S1SvImJ_G0016926.1 mouse_genomes_project 1 195847048 195848881 - Kctd3 protein_coding retained_intron MGP_129S1SvImJ_T0024143.1 MGP_129S1SvImJ_G0016926.1 mouse_genomes_project 1 195847160 195853233 - MGP_129S1SvImJ_P0024143 Kctd3 protein_coding protein_coding MGP_129S1SvImJ_T0024144.1 MGP_129S1SvImJ_G0016926.1 mouse_genomes_project 1 195847203 195848380 - Kctd3 protein_coding retained_intron MGP_129S1SvImJ_T0024145.1 MGP_129S1SvImJ_G0016926.1 mouse_genomes_project 1 195848441 195851246 - Kctd3 protein_coding processed_transcript MGP_129S1SvImJ_T0024146.1 MGP_129S1SvImJ_G0016926.1 mouse_genomes_project 1 195853183 195856443 - Kctd3 protein_coding retained_intron MGP_129S1SvImJ_T0024147.1 MGP_129S1SvImJ_G0016926.1 mouse_genomes_project 1 195855433 195883728 - Kctd3 protein_coding retained_intron MGP_129S1SvImJ_T0024148.1 MGP_129S1SvImJ_G0016926.1 mouse_genomes_project 1 195869759 195873593 - Kctd3 protein_coding retained_intron MGP_129S1SvImJ_T0021580.1 MGP_129S1SvImJ_G0016363.1 mouse_genomes_project 1 101607008 102390265 + MGP_129S1SvImJ_P0021580 Cntnap5b protein_coding protein_coding MGP_129S1SvImJ_T0021581.1 MGP_129S1SvImJ_G0016363.1 mouse_genomes_project 1 101970341 102391358 + MGP_129S1SvImJ_P0021581 Cntnap5b protein_coding protein_coding MGP_129S1SvImJ_T0021582.1 MGP_129S1SvImJ_G0016363.1 mouse_genomes_project 1 102132237 102258919 + Cntnap5b protein_coding processed_transcript MGP_129S1SvImJ_T0099080.1 MGP_129S1SvImJ_G0037147.1 mouse_genomes_project 1 53543809 53543923 - Gm24251 snRNA snRNA MGP_129S1SvImJ_T0023411.1 MGP_129S1SvImJ_G0016749.1 mouse_genomes_project 1 177015974 177016666 - Ndufs2 protein_coding retained_intron MGP_129S1SvImJ_T0023412.1 MGP_129S1SvImJ_G0016749.1 mouse_genomes_project 1 177015974 177031190 - Ndufs2 protein_coding retained_intron MGP_129S1SvImJ_T0023413.1 MGP_129S1SvImJ_G0016749.1 mouse_genomes_project 1 177015974 177018652 - Ndufs2 protein_coding processed_transcript MGP_129S1SvImJ_T0023414.1 MGP_129S1SvImJ_G0016749.1 mouse_genomes_project 1 177015974 177031190 - MGP_129S1SvImJ_P0023414 Ndufs2 protein_coding protein_coding MGP_129S1SvImJ_T0023415.1 MGP_129S1SvImJ_G0016749.1 mouse_genomes_project 1 177015974 177031190 - MGP_129S1SvImJ_P0023415 Ndufs2 protein_coding protein_coding MGP_129S1SvImJ_T0023416.1 MGP_129S1SvImJ_G0016749.1 mouse_genomes_project 1 177018268 177021168 - Ndufs2 protein_coding processed_transcript MGP_129S1SvImJ_T0023417.1 MGP_129S1SvImJ_G0016749.1 mouse_genomes_project 1 177019643 177035263 - MGP_129S1SvImJ_P0023417 Ndufs2 protein_coding protein_coding MGP_129S1SvImJ_T0023418.1 MGP_129S1SvImJ_G0016749.1 mouse_genomes_project 1 177019861 177035400 - MGP_129S1SvImJ_P0023418 Ndufs2 protein_coding protein_coding MGP_129S1SvImJ_T0019900.1 MGP_129S1SvImJ_G0016035.1 mouse_genomes_project 1 54982964 55040137 - MGP_129S1SvImJ_P0019900 Boll protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019901.1 MGP_129S1SvImJ_G0016035.1 mouse_genomes_project 1 55006416 55097426 - MGP_129S1SvImJ_P0019901 Boll protein_coding protein_coding MGP_129S1SvImJ_T0019902.1 MGP_129S1SvImJ_G0016035.1 mouse_genomes_project 1 55040027 55100004 - MGP_129S1SvImJ_P0019902 Boll protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019903.1 MGP_129S1SvImJ_G0016035.1 mouse_genomes_project 1 55040027 55100004 - MGP_129S1SvImJ_P0019903 Boll protein_coding protein_coding MGP_129S1SvImJ_T0019904.1 MGP_129S1SvImJ_G0016035.1 mouse_genomes_project 1 55040027 55099411 - MGP_129S1SvImJ_P0019904 Boll protein_coding protein_coding MGP_129S1SvImJ_T0019905.1 MGP_129S1SvImJ_G0016035.1 mouse_genomes_project 1 55084288 55100154 - MGP_129S1SvImJ_P0019905 Boll protein_coding protein_coding MGP_129S1SvImJ_T0019906.1 MGP_129S1SvImJ_G0016035.1 mouse_genomes_project 1 55086962 55097426 - Boll protein_coding processed_transcript MGP_129S1SvImJ_T0022946.1 MGP_129S1SvImJ_G0016644.1 mouse_genomes_project 1 166143810 166222596 + MGP_129S1SvImJ_P0022946 Rc3h1 protein_coding protein_coding MGP_129S1SvImJ_T0022947.1 MGP_129S1SvImJ_G0016644.1 mouse_genomes_project 1 166171527 166215426 + MGP_129S1SvImJ_P0022947 Rc3h1 protein_coding protein_coding MGP_129S1SvImJ_T0022948.1 MGP_129S1SvImJ_G0016644.1 mouse_genomes_project 1 166195985 166197140 + Rc3h1 protein_coding retained_intron MGP_129S1SvImJ_T0011260.1 MGP_129S1SvImJ_G0009376.1 mouse_genomes_project 1 13348540 13348843 + Gm23259 misc_RNA misc_RNA MGP_129S1SvImJ_T0024134.1 MGP_129S1SvImJ_G0016925.1 mouse_genomes_project 1 195120381 195216818 + Ush2a protein_coding retained_intron MGP_129S1SvImJ_T0024135.1 MGP_129S1SvImJ_G0016925.1 mouse_genomes_project 1 195120393 195314767 + Ush2a protein_coding retained_intron MGP_129S1SvImJ_T0024136.1 MGP_129S1SvImJ_G0016925.1 mouse_genomes_project 1 195121392 195838305 + MGP_129S1SvImJ_P0024136 Ush2a protein_coding protein_coding MGP_129S1SvImJ_T0024137.1 MGP_129S1SvImJ_G0016925.1 mouse_genomes_project 1 195400238 195544664 + Ush2a protein_coding retained_intron MGP_129S1SvImJ_T0024138.1 MGP_129S1SvImJ_G0016925.1 mouse_genomes_project 1 195825613 195838229 + MGP_129S1SvImJ_P0024138 Ush2a protein_coding protein_coding MGP_129S1SvImJ_T0019910.1 MGP_129S1SvImJ_G0016038.1 mouse_genomes_project 1 56581595 56766886 - MGP_129S1SvImJ_P0019910 Satb2 protein_coding protein_coding MGP_129S1SvImJ_T0019911.1 MGP_129S1SvImJ_G0016038.1 mouse_genomes_project 1 56581600 56766242 - MGP_129S1SvImJ_P0019911 Satb2 protein_coding protein_coding MGP_129S1SvImJ_T0019912.1 MGP_129S1SvImJ_G0016038.1 mouse_genomes_project 1 56581602 56764231 - MGP_129S1SvImJ_P0019912 Satb2 protein_coding protein_coding MGP_129S1SvImJ_T0019913.1 MGP_129S1SvImJ_G0016038.1 mouse_genomes_project 1 56741163 56764199 - MGP_129S1SvImJ_P0019913 Satb2 protein_coding protein_coding MGP_129S1SvImJ_T0019914.1 MGP_129S1SvImJ_G0016038.1 mouse_genomes_project 1 56764098 56772993 - MGP_129S1SvImJ_P0019914 Satb2 protein_coding protein_coding MGP_129S1SvImJ_T0021532.1 MGP_129S1SvImJ_G0016352.1 mouse_genomes_project 1 95676836 95681801 + MGP_129S1SvImJ_P0021532 Neu4 protein_coding protein_coding MGP_129S1SvImJ_T0021533.1 MGP_129S1SvImJ_G0016352.1 mouse_genomes_project 1 95676878 95684718 + MGP_129S1SvImJ_P0021533 Neu4 protein_coding protein_coding MGP_129S1SvImJ_T0005890.1 MGP_129S1SvImJ_G0004942.1 mouse_genomes_project 1 121045007 121051909 + Gm28867 lincRNA lincRNA MGP_129S1SvImJ_T0000648.1 MGP_129S1SvImJ_G0000587.1 mouse_genomes_project 1 133858611 133868246 + TEC TEC MGP_129S1SvImJ_T0000557.1 MGP_129S1SvImJ_G0000496.1 mouse_genomes_project 1 81503512 81507063 - TEC TEC MGP_129S1SvImJ_T0005933.1 MGP_129S1SvImJ_G0004978.1 mouse_genomes_project 1 140430448 140432994 - Gm33994 lincRNA lincRNA MGP_129S1SvImJ_T0019295.1 MGP_129S1SvImJ_G0015919.1 mouse_genomes_project 1 34779303 34788136 - MGP_129S1SvImJ_P0019295 Neurl3 protein_coding protein_coding MGP_129S1SvImJ_T0019296.1 MGP_129S1SvImJ_G0015919.1 mouse_genomes_project 1 34783561 34791637 - MGP_129S1SvImJ_P0019296 Neurl3 protein_coding protein_coding MGP_129S1SvImJ_T0021675.1 MGP_129S1SvImJ_G0016389.1 mouse_genomes_project 1 120971028 120990261 - MGP_129S1SvImJ_P0021675 Tsn protein_coding protein_coding MGP_129S1SvImJ_T0021676.1 MGP_129S1SvImJ_G0016389.1 mouse_genomes_project 1 120977212 120989083 - Tsn protein_coding retained_intron MGP_129S1SvImJ_T0021677.1 MGP_129S1SvImJ_G0016389.1 mouse_genomes_project 1 120978451 120988832 - Tsn protein_coding retained_intron MGP_129S1SvImJ_T0021678.1 MGP_129S1SvImJ_G0016389.1 mouse_genomes_project 1 120982072 120990307 - Tsn protein_coding processed_transcript MGP_129S1SvImJ_T0021679.1 MGP_129S1SvImJ_G0016389.1 mouse_genomes_project 1 120987552 120990081 - Tsn protein_coding retained_intron MGP_129S1SvImJ_T0021680.1 MGP_129S1SvImJ_G0016389.1 mouse_genomes_project 1 120989525 120990584 - Tsn protein_coding retained_intron MGP_129S1SvImJ_T0000680.1 MGP_129S1SvImJ_G0000617.1 mouse_genomes_project 1 142178954 142184840 - TEC TEC MGP_129S1SvImJ_T0102109.1 MGP_129S1SvImJ_G0039944.1 mouse_genomes_project 1 187959593 187960271 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099141.1 MGP_129S1SvImJ_G0037208.1 mouse_genomes_project 1 182002066 182002173 + Gm23805 snRNA snRNA MGP_129S1SvImJ_T0020261.1 MGP_129S1SvImJ_G0016098.1 mouse_genomes_project 1 64909606 64916831 - MGP_129S1SvImJ_P0020261 Fzd5 protein_coding protein_coding MGP_129S1SvImJ_T0020262.1 MGP_129S1SvImJ_G0016098.1 mouse_genomes_project 1 64913548 64916829 - MGP_129S1SvImJ_P0020262 Fzd5 protein_coding protein_coding MGP_129S1SvImJ_T0022138.1 MGP_129S1SvImJ_G0016485.1 mouse_genomes_project 1 136897825 136929005 + MGP_129S1SvImJ_P0022138 Ren1 protein_coding protein_coding MGP_129S1SvImJ_T0022139.1 MGP_129S1SvImJ_G0016485.1 mouse_genomes_project 1 136899202 136917730 + MGP_129S1SvImJ_P0022139 Ren1 protein_coding protein_coding MGP_129S1SvImJ_T0022140.1 MGP_129S1SvImJ_G0016485.1 mouse_genomes_project 1 136917596 136929005 + MGP_129S1SvImJ_P0022140 Ren1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0002928.1 MGP_129S1SvImJ_G0002759.1 mouse_genomes_project 1 154969263 154992741 - 2310030A07Rik antisense antisense MGP_129S1SvImJ_T0012345.1 MGP_129S1SvImJ_G0010434.1 mouse_genomes_project 1 175221636 175222220 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002878.1 MGP_129S1SvImJ_G0002723.1 mouse_genomes_project 1 94923972 94935308 + Gm28535 antisense antisense MGP_129S1SvImJ_T0012262.1 MGP_129S1SvImJ_G0010351.1 mouse_genomes_project 1 138982172 138983425 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011274.1 MGP_129S1SvImJ_G0009390.1 mouse_genomes_project 1 106563153 106563483 + Gm23537 misc_RNA misc_RNA MGP_129S1SvImJ_T0005717.1 MGP_129S1SvImJ_G0004812.1 mouse_genomes_project 1 41139890 41141273 + Gm9915 lincRNA lincRNA MGP_129S1SvImJ_T0005718.1 MGP_129S1SvImJ_G0004812.1 mouse_genomes_project 1 41139891 41141273 + Gm9915 lincRNA lincRNA MGP_129S1SvImJ_T0021764.1 MGP_129S1SvImJ_G0016404.1 mouse_genomes_project 1 122904107 122976832 + MGP_129S1SvImJ_P0021764 3110009E18Rik protein_coding protein_coding MGP_129S1SvImJ_T0021765.1 MGP_129S1SvImJ_G0016404.1 mouse_genomes_project 1 122904115 122976832 + MGP_129S1SvImJ_P0021765 3110009E18Rik protein_coding protein_coding MGP_129S1SvImJ_T0021766.1 MGP_129S1SvImJ_G0016404.1 mouse_genomes_project 1 122904120 122976832 + MGP_129S1SvImJ_P0021766 3110009E18Rik protein_coding protein_coding MGP_129S1SvImJ_T0021767.1 MGP_129S1SvImJ_G0016404.1 mouse_genomes_project 1 122934800 122954693 + 3110009E18Rik protein_coding processed_transcript MGP_129S1SvImJ_T0021768.1 MGP_129S1SvImJ_G0016404.1 mouse_genomes_project 1 122934872 122958743 + MGP_129S1SvImJ_P0021768 3110009E18Rik protein_coding protein_coding MGP_129S1SvImJ_T0021769.1 MGP_129S1SvImJ_G0016404.1 mouse_genomes_project 1 122944757 122963205 + 3110009E18Rik protein_coding processed_transcript MGP_129S1SvImJ_T0009498.1 MGP_129S1SvImJ_G0007614.1 mouse_genomes_project 1 46826654 46826759 - Mir6350 miRNA miRNA MGP_129S1SvImJ_T0012391.1 MGP_129S1SvImJ_G0010480.1 mouse_genomes_project 1 199068588 199068820 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021272.1 MGP_129S1SvImJ_G0016299.1 mouse_genomes_project 1 92487391 92498942 - MGP_129S1SvImJ_P0021272 Rab17 protein_coding protein_coding MGP_129S1SvImJ_T0021273.1 MGP_129S1SvImJ_G0016299.1 mouse_genomes_project 1 92487393 92496959 - MGP_129S1SvImJ_P0021273 Rab17 protein_coding protein_coding MGP_129S1SvImJ_T0021274.1 MGP_129S1SvImJ_G0016299.1 mouse_genomes_project 1 92487989 92498829 - Rab17 protein_coding processed_transcript MGP_129S1SvImJ_T0021275.1 MGP_129S1SvImJ_G0016299.1 mouse_genomes_project 1 92488112 92496909 - Rab17 protein_coding processed_transcript MGP_129S1SvImJ_T0021276.1 MGP_129S1SvImJ_G0016299.1 mouse_genomes_project 1 92489379 92498925 - MGP_129S1SvImJ_P0021276 Rab17 protein_coding protein_coding MGP_129S1SvImJ_T0100370.1 MGP_129S1SvImJ_G0038437.1 mouse_genomes_project 1 131754727 131754861 + Gm23902 snoRNA snoRNA MGP_129S1SvImJ_T0099146.1 MGP_129S1SvImJ_G0037213.1 mouse_genomes_project 1 188375775 188375869 - Gm23690 snRNA snRNA MGP_129S1SvImJ_T0022702.1 MGP_129S1SvImJ_G0016602.1 mouse_genomes_project 1 158625932 158656744 - MGP_129S1SvImJ_P0022702 Rgsl1 protein_coding protein_coding MGP_129S1SvImJ_T0022703.1 MGP_129S1SvImJ_G0016602.1 mouse_genomes_project 1 158625937 158697260 - MGP_129S1SvImJ_P0022703 Rgsl1 protein_coding protein_coding MGP_129S1SvImJ_T0022704.1 MGP_129S1SvImJ_G0016602.1 mouse_genomes_project 1 158625943 158676250 - MGP_129S1SvImJ_P0022704 Rgsl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022705.1 MGP_129S1SvImJ_G0016602.1 mouse_genomes_project 1 158628239 158637292 - Rgsl1 protein_coding processed_transcript MGP_129S1SvImJ_T0022706.1 MGP_129S1SvImJ_G0016602.1 mouse_genomes_project 1 158631692 158697252 - MGP_129S1SvImJ_P0022706 Rgsl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022707.1 MGP_129S1SvImJ_G0016602.1 mouse_genomes_project 1 158639142 158671110 - Rgsl1 protein_coding retained_intron MGP_129S1SvImJ_T0022708.1 MGP_129S1SvImJ_G0016602.1 mouse_genomes_project 1 158647133 158662418 - Rgsl1 protein_coding processed_transcript MGP_129S1SvImJ_T0000782.1 MGP_129S1SvImJ_G0000719.1 mouse_genomes_project 1 183834138 183835369 - TEC TEC MGP_129S1SvImJ_T0019177.1 MGP_129S1SvImJ_G0015897.1 mouse_genomes_project 1 29362180 29464203 - MGP_129S1SvImJ_P0019177 4931428L18Rik protein_coding protein_coding MGP_129S1SvImJ_T0019178.1 MGP_129S1SvImJ_G0015897.1 mouse_genomes_project 1 29368058 29464263 - MGP_129S1SvImJ_P0019178 4931428L18Rik protein_coding protein_coding MGP_129S1SvImJ_T0019179.1 MGP_129S1SvImJ_G0015897.1 mouse_genomes_project 1 29368670 29464234 - MGP_129S1SvImJ_P0019179 4931428L18Rik protein_coding protein_coding MGP_129S1SvImJ_T0019182.1 MGP_129S1SvImJ_G0015897.1 mouse_genomes_project 1 29444546 29464290 - MGP_129S1SvImJ_P0019182 4931428L18Rik protein_coding protein_coding MGP_129S1SvImJ_T0100320.1 MGP_129S1SvImJ_G0038387.1 mouse_genomes_project 1 22402229 22402366 - Gm26418 snoRNA snoRNA MGP_129S1SvImJ_T0012080.1 MGP_129S1SvImJ_G0010169.1 mouse_genomes_project 1 61629967 61630357 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098699.1 MGP_129S1SvImJ_G0036784.1 mouse_genomes_project 1 44853041 44853244 + Gm23984 ribozyme ribozyme MGP_129S1SvImJ_T0019399.1 MGP_129S1SvImJ_G0015936.1 mouse_genomes_project 1 35910506 35960118 + Inpp4a protein_coding processed_transcript MGP_129S1SvImJ_T0019400.1 MGP_129S1SvImJ_G0015936.1 mouse_genomes_project 1 35910532 36023572 + MGP_129S1SvImJ_P0019400 Inpp4a protein_coding protein_coding MGP_129S1SvImJ_T0019401.1 MGP_129S1SvImJ_G0015936.1 mouse_genomes_project 1 35910534 35913408 + Inpp4a protein_coding retained_intron MGP_129S1SvImJ_T0019402.1 MGP_129S1SvImJ_G0015936.1 mouse_genomes_project 1 35910556 36012404 + MGP_129S1SvImJ_P0019402 Inpp4a protein_coding protein_coding MGP_129S1SvImJ_T0019403.1 MGP_129S1SvImJ_G0015936.1 mouse_genomes_project 1 35910949 36021135 + MGP_129S1SvImJ_P0019403 Inpp4a protein_coding protein_coding MGP_129S1SvImJ_T0019404.1 MGP_129S1SvImJ_G0015936.1 mouse_genomes_project 1 35910949 36021579 + MGP_129S1SvImJ_P0019404 Inpp4a protein_coding protein_coding MGP_129S1SvImJ_T0019405.1 MGP_129S1SvImJ_G0015936.1 mouse_genomes_project 1 35970542 36016536 + MGP_129S1SvImJ_P0019405 Inpp4a protein_coding protein_coding MGP_129S1SvImJ_T0019406.1 MGP_129S1SvImJ_G0015936.1 mouse_genomes_project 1 35970542 36021315 + MGP_129S1SvImJ_P0019406 Inpp4a protein_coding protein_coding MGP_129S1SvImJ_T0019407.1 MGP_129S1SvImJ_G0015936.1 mouse_genomes_project 1 35971064 36021105 + MGP_129S1SvImJ_P0019407 Inpp4a protein_coding protein_coding MGP_129S1SvImJ_T0019408.1 MGP_129S1SvImJ_G0015936.1 mouse_genomes_project 1 35982332 36017280 + MGP_129S1SvImJ_P0019408 Inpp4a protein_coding protein_coding MGP_129S1SvImJ_T0019409.1 MGP_129S1SvImJ_G0015936.1 mouse_genomes_project 1 35982332 36017288 + MGP_129S1SvImJ_P0019409 Inpp4a protein_coding protein_coding MGP_129S1SvImJ_T0019410.1 MGP_129S1SvImJ_G0015936.1 mouse_genomes_project 1 35982336 36017285 + MGP_129S1SvImJ_P0019410 Inpp4a protein_coding protein_coding MGP_129S1SvImJ_T0019411.1 MGP_129S1SvImJ_G0015936.1 mouse_genomes_project 1 35990614 35993018 + Inpp4a protein_coding retained_intron MGP_129S1SvImJ_T0002940.1 MGP_129S1SvImJ_G0002768.1 mouse_genomes_project 1 161925187 161925546 + 4930439D14Rik antisense antisense MGP_129S1SvImJ_T0099151.1 MGP_129S1SvImJ_G0037218.1 mouse_genomes_project 1 199804863 199804979 + Gm22265 snRNA snRNA MGP_129S1SvImJ_T0021399.1 MGP_129S1SvImJ_G0016327.1 mouse_genomes_project 1 94465942 94506315 - MGP_129S1SvImJ_P0021399 Ankmy1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0021400.1 MGP_129S1SvImJ_G0016327.1 mouse_genomes_project 1 94474877 94506638 - MGP_129S1SvImJ_P0021400 Ankmy1 protein_coding protein_coding MGP_129S1SvImJ_T0021401.1 MGP_129S1SvImJ_G0016327.1 mouse_genomes_project 1 94474877 94506638 - MGP_129S1SvImJ_P0021401 Ankmy1 protein_coding protein_coding MGP_129S1SvImJ_T0000597.1 MGP_129S1SvImJ_G0000536.1 mouse_genomes_project 1 97453123 97455213 + TEC TEC MGP_129S1SvImJ_T0002906.1 MGP_129S1SvImJ_G0002742.1 mouse_genomes_project 1 135860840 135862223 + Gm15849 antisense antisense MGP_129S1SvImJ_T0012220.1 MGP_129S1SvImJ_G0010309.1 mouse_genomes_project 1 120913623 120914786 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020945.1 MGP_129S1SvImJ_G0016225.1 mouse_genomes_project 1 84231486 84390370 - MGP_129S1SvImJ_P0020945 Sphkap protein_coding protein_coding MGP_129S1SvImJ_T0020946.1 MGP_129S1SvImJ_G0016225.1 mouse_genomes_project 1 84232785 84390177 - MGP_129S1SvImJ_P0020946 Sphkap protein_coding unknown_likely_coding MGP_129S1SvImJ_T0020947.1 MGP_129S1SvImJ_G0016225.1 mouse_genomes_project 1 84232789 84258486 - MGP_129S1SvImJ_P0020947 Sphkap protein_coding protein_coding MGP_129S1SvImJ_T0020948.1 MGP_129S1SvImJ_G0016225.1 mouse_genomes_project 1 84244156 84390335 - Sphkap protein_coding retained_intron MGP_129S1SvImJ_T0020949.1 MGP_129S1SvImJ_G0016225.1 mouse_genomes_project 1 84318312 84390309 - Sphkap protein_coding retained_intron MGP_129S1SvImJ_T0020950.1 MGP_129S1SvImJ_G0016225.1 mouse_genomes_project 1 84364690 84390335 - Sphkap protein_coding retained_intron MGP_129S1SvImJ_T0012180.1 MGP_129S1SvImJ_G0010269.1 mouse_genomes_project 1 106591599 106592667 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000751.1 MGP_129S1SvImJ_G0000688.1 mouse_genomes_project 1 169867142 169869424 + TEC TEC MGP_129S1SvImJ_T0102048.1 MGP_129S1SvImJ_G0039883.1 mouse_genomes_project 1 45145704 45148154 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002870.1 MGP_129S1SvImJ_G0002715.1 mouse_genomes_project 1 89771245 89776688 - 4930453O03Rik antisense antisense MGP_129S1SvImJ_T0022170.1 MGP_129S1SvImJ_G0016492.1 mouse_genomes_project 1 137285508 137298238 - MGP_129S1SvImJ_P0022170 Lax1 protein_coding protein_coding MGP_129S1SvImJ_T0022171.1 MGP_129S1SvImJ_G0016492.1 mouse_genomes_project 1 137286878 137298216 - MGP_129S1SvImJ_P0022171 Lax1 protein_coding protein_coding MGP_129S1SvImJ_T0011868.1 MGP_129S1SvImJ_G0009957.1 mouse_genomes_project 1 1275127 1276800 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000456.1 MGP_129S1SvImJ_G0000396.1 mouse_genomes_project 1 30851465 30854867 + TEC TEC MGP_129S1SvImJ_T0006023.1 MGP_129S1SvImJ_G0005049.1 mouse_genomes_project 1 187216989 187222206 - Gm38293 lincRNA lincRNA MGP_129S1SvImJ_T0012169.1 MGP_129S1SvImJ_G0010258.1 mouse_genomes_project 1 101864118 101864682 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024057.1 MGP_129S1SvImJ_G0016908.1 mouse_genomes_project 1 191402500 191408855 - MGP_129S1SvImJ_P0024057 Hlx protein_coding protein_coding MGP_129S1SvImJ_T0024058.1 MGP_129S1SvImJ_G0016908.1 mouse_genomes_project 1 191402507 191406916 - MGP_129S1SvImJ_P0024058 Hlx protein_coding protein_coding MGP_129S1SvImJ_T0012163.1 MGP_129S1SvImJ_G0010252.1 mouse_genomes_project 1 100043217 100044201 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102097.1 MGP_129S1SvImJ_G0039932.1 mouse_genomes_project 1 179817187 180038737 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0017082.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166285522 166288627 + Gas5 processed_transcript retained_intron MGP_129S1SvImJ_T0017083.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166285705 166289640 + Gas5 processed_transcript lincRNA MGP_129S1SvImJ_T0017084.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166286027 166289636 + Gas5 processed_transcript lincRNA MGP_129S1SvImJ_T0017085.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166286165 166289638 + Gas5 processed_transcript lincRNA MGP_129S1SvImJ_T0017086.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166286261 166288642 + Gas5 processed_transcript retained_intron MGP_129S1SvImJ_T0017087.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166286261 166289634 + Gas5 processed_transcript retained_intron MGP_129S1SvImJ_T0017088.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166286261 166289638 + Gas5 processed_transcript lincRNA MGP_129S1SvImJ_T0017089.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166286264 166289640 + Gas5 processed_transcript retained_intron MGP_129S1SvImJ_T0017090.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166286264 166288151 + Gas5 processed_transcript retained_intron MGP_129S1SvImJ_T0017091.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166286264 166289640 + Gas5 processed_transcript lincRNA MGP_129S1SvImJ_T0017092.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166286264 166289635 + Gas5 processed_transcript retained_intron MGP_129S1SvImJ_T0017093.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166286265 166289344 + Gas5 processed_transcript retained_intron MGP_129S1SvImJ_T0017094.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166286266 166288656 + Gas5 processed_transcript retained_intron MGP_129S1SvImJ_T0017095.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166286270 166287722 + Gas5 processed_transcript retained_intron MGP_129S1SvImJ_T0017096.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166286276 166289640 + Gas5 processed_transcript retained_intron MGP_129S1SvImJ_T0017097.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166286282 166289640 + Gas5 processed_transcript retained_intron MGP_129S1SvImJ_T0017098.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166286284 166289576 + Gas5 processed_transcript retained_intron MGP_129S1SvImJ_T0017099.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166286286 166289640 + Gas5 processed_transcript retained_intron MGP_129S1SvImJ_T0017100.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166287117 166287983 + Gas5 processed_transcript retained_intron MGP_129S1SvImJ_T0017101.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166287789 166289640 + Gas5 processed_transcript retained_intron MGP_129S1SvImJ_T0017102.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166288384 166289633 + Gas5 processed_transcript retained_intron MGP_129S1SvImJ_T0017103.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166288405 166289223 + Gas5 processed_transcript retained_intron MGP_129S1SvImJ_T0017104.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166288445 166289636 + Gas5 processed_transcript retained_intron MGP_129S1SvImJ_T0017105.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166288815 166289638 + Gas5 processed_transcript retained_intron MGP_129S1SvImJ_T0017106.1 MGP_129S1SvImJ_G0015120.1 mouse_genomes_project 1 166288877 166289640 + Gas5 processed_transcript retained_intron MGP_129S1SvImJ_T0002920.1 MGP_129S1SvImJ_G0002752.1 mouse_genomes_project 1 139918121 139921367 - Gm37759 antisense antisense MGP_129S1SvImJ_T0005826.1 MGP_129S1SvImJ_G0004887.1 mouse_genomes_project 1 81029204 81035113 + 2310015K22Rik lincRNA lincRNA MGP_129S1SvImJ_T0023452.1 MGP_129S1SvImJ_G0016754.1 mouse_genomes_project 1 177075749 177082248 - MGP_129S1SvImJ_P0023452 Ufc1 protein_coding protein_coding MGP_129S1SvImJ_T0023453.1 MGP_129S1SvImJ_G0016754.1 mouse_genomes_project 1 177075751 177077600 - Ufc1 protein_coding retained_intron MGP_129S1SvImJ_T0023454.1 MGP_129S1SvImJ_G0016754.1 mouse_genomes_project 1 177075880 177082165 - MGP_129S1SvImJ_P0023454 Ufc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0023455.1 MGP_129S1SvImJ_G0016754.1 mouse_genomes_project 1 177075898 177082211 - MGP_129S1SvImJ_P0023455 Ufc1 protein_coding protein_coding MGP_129S1SvImJ_T0023456.1 MGP_129S1SvImJ_G0016754.1 mouse_genomes_project 1 177075963 177082164 - Ufc1 protein_coding retained_intron MGP_129S1SvImJ_T0012167.1 MGP_129S1SvImJ_G0010256.1 mouse_genomes_project 1 101456656 101458502 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024238.1 MGP_129S1SvImJ_G0016945.1 mouse_genomes_project 1 198587641 198628576 - MGP_129S1SvImJ_P0024238 Dtl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024239.1 MGP_129S1SvImJ_G0016945.1 mouse_genomes_project 1 198587650 198628599 - MGP_129S1SvImJ_P0024239 Dtl protein_coding protein_coding MGP_129S1SvImJ_T0024240.1 MGP_129S1SvImJ_G0016945.1 mouse_genomes_project 1 198589385 198628569 - Dtl protein_coding processed_transcript MGP_129S1SvImJ_T0024241.1 MGP_129S1SvImJ_G0016945.1 mouse_genomes_project 1 198600052 198628568 - MGP_129S1SvImJ_P0024241 Dtl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024242.1 MGP_129S1SvImJ_G0016945.1 mouse_genomes_project 1 198611812 198628566 - Dtl protein_coding retained_intron MGP_129S1SvImJ_T0024243.1 MGP_129S1SvImJ_G0016945.1 mouse_genomes_project 1 198623875 198628568 - Dtl protein_coding retained_intron MGP_129S1SvImJ_T0020906.1 MGP_129S1SvImJ_G0016218.1 mouse_genomes_project 1 83645967 83673497 + MGP_129S1SvImJ_P0020906 Mff protein_coding unknown_likely_coding MGP_129S1SvImJ_T0020907.1 MGP_129S1SvImJ_G0016218.1 mouse_genomes_project 1 83645990 83673487 + MGP_129S1SvImJ_P0020907 Mff protein_coding protein_coding MGP_129S1SvImJ_T0020908.1 MGP_129S1SvImJ_G0016218.1 mouse_genomes_project 1 83646018 83656609 + Mff protein_coding processed_transcript MGP_129S1SvImJ_T0020909.1 MGP_129S1SvImJ_G0016218.1 mouse_genomes_project 1 83646019 83673484 + MGP_129S1SvImJ_P0020909 Mff protein_coding protein_coding MGP_129S1SvImJ_T0020910.1 MGP_129S1SvImJ_G0016218.1 mouse_genomes_project 1 83646025 83673487 + MGP_129S1SvImJ_P0020910 Mff protein_coding protein_coding MGP_129S1SvImJ_T0020911.1 MGP_129S1SvImJ_G0016218.1 mouse_genomes_project 1 83646034 83657830 + Mff protein_coding retained_intron MGP_129S1SvImJ_T0020912.1 MGP_129S1SvImJ_G0016218.1 mouse_genomes_project 1 83646040 83673447 + MGP_129S1SvImJ_P0020912 Mff protein_coding protein_coding MGP_129S1SvImJ_T0020913.1 MGP_129S1SvImJ_G0016218.1 mouse_genomes_project 1 83646048 83673491 + MGP_129S1SvImJ_P0020913 Mff protein_coding protein_coding MGP_129S1SvImJ_T0020914.1 MGP_129S1SvImJ_G0016218.1 mouse_genomes_project 1 83650330 83673487 + MGP_129S1SvImJ_P0020914 Mff protein_coding protein_coding MGP_129S1SvImJ_T0020915.1 MGP_129S1SvImJ_G0016218.1 mouse_genomes_project 1 83650373 83672738 + MGP_129S1SvImJ_P0020915 Mff protein_coding protein_coding MGP_129S1SvImJ_T0020916.1 MGP_129S1SvImJ_G0016218.1 mouse_genomes_project 1 83650427 83662986 + MGP_129S1SvImJ_P0020916 Mff protein_coding protein_coding MGP_129S1SvImJ_T0020917.1 MGP_129S1SvImJ_G0016218.1 mouse_genomes_project 1 83650427 83671678 + MGP_129S1SvImJ_P0020917 Mff protein_coding protein_coding MGP_129S1SvImJ_T0020918.1 MGP_129S1SvImJ_G0016218.1 mouse_genomes_project 1 83656571 83673255 + MGP_129S1SvImJ_P0020918 Mff protein_coding protein_coding MGP_129S1SvImJ_T0020919.1 MGP_129S1SvImJ_G0016218.1 mouse_genomes_project 1 83662740 83672816 + Mff protein_coding retained_intron MGP_129S1SvImJ_T0020920.1 MGP_129S1SvImJ_G0016218.1 mouse_genomes_project 1 83663079 83666997 + Mff protein_coding retained_intron MGP_129S1SvImJ_T0020921.1 MGP_129S1SvImJ_G0016218.1 mouse_genomes_project 1 83668024 83672983 + Mff protein_coding retained_intron MGP_129S1SvImJ_T0020922.1 MGP_129S1SvImJ_G0016218.1 mouse_genomes_project 1 83669485 83672825 + Mff protein_coding retained_intron MGP_129S1SvImJ_T0000528.1 MGP_129S1SvImJ_G0000467.1 mouse_genomes_project 1 67037363 67041965 + TEC TEC MGP_129S1SvImJ_T0022372.1 MGP_129S1SvImJ_G0016536.1 mouse_genomes_project 1 139932872 139982601 + MGP_129S1SvImJ_P0022372 Kif21b protein_coding protein_coding MGP_129S1SvImJ_T0022373.1 MGP_129S1SvImJ_G0016536.1 mouse_genomes_project 1 139932937 139951300 + Kif21b protein_coding retained_intron MGP_129S1SvImJ_T0022374.1 MGP_129S1SvImJ_G0016536.1 mouse_genomes_project 1 139933205 139982611 + MGP_129S1SvImJ_P0022374 Kif21b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0022375.1 MGP_129S1SvImJ_G0016536.1 mouse_genomes_project 1 139961640 139966356 + MGP_129S1SvImJ_P0022375 Kif21b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022376.1 MGP_129S1SvImJ_G0016536.1 mouse_genomes_project 1 139964229 139966142 + Kif21b protein_coding retained_intron MGP_129S1SvImJ_T0022377.1 MGP_129S1SvImJ_G0016536.1 mouse_genomes_project 1 139973826 139976904 + Kif21b protein_coding processed_transcript MGP_129S1SvImJ_T0012379.1 MGP_129S1SvImJ_G0010468.1 mouse_genomes_project 1 193767990 193769009 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011976.1 MGP_129S1SvImJ_G0010065.1 mouse_genomes_project 1 32752539 32754176 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006024.1 MGP_129S1SvImJ_G0005050.1 mouse_genomes_project 1 187261911 187269961 + Gm17275 lincRNA lincRNA MGP_129S1SvImJ_T0099096.1 MGP_129S1SvImJ_G0037163.1 mouse_genomes_project 1 88591869 88591970 + Gm26187 snRNA snRNA MGP_129S1SvImJ_T0000560.1 MGP_129S1SvImJ_G0000499.1 mouse_genomes_project 1 82392242 82394247 - TEC TEC MGP_129S1SvImJ_T0000514.1 MGP_129S1SvImJ_G0000453.1 mouse_genomes_project 1 60959483 60960884 + TEC TEC MGP_129S1SvImJ_T0012372.1 MGP_129S1SvImJ_G0010461.1 mouse_genomes_project 1 188746499 188747283 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100362.1 MGP_129S1SvImJ_G0038429.1 mouse_genomes_project 1 110136479 110136611 + Gm22438 snoRNA snoRNA MGP_129S1SvImJ_T0000611.1 MGP_129S1SvImJ_G0000550.1 mouse_genomes_project 1 113257048 113259991 - TEC TEC MGP_129S1SvImJ_T0020345.1 MGP_129S1SvImJ_G0016115.1 mouse_genomes_project 1 66981226 67059095 - MGP_129S1SvImJ_P0020345 Kansl1l protein_coding protein_coding MGP_129S1SvImJ_T0020346.1 MGP_129S1SvImJ_G0016115.1 mouse_genomes_project 1 66982751 67075314 - MGP_129S1SvImJ_P0020346 Kansl1l protein_coding unknown_likely_coding MGP_129S1SvImJ_T0020347.1 MGP_129S1SvImJ_G0016115.1 mouse_genomes_project 1 66997528 67075390 - MGP_129S1SvImJ_P0020347 Kansl1l protein_coding protein_coding MGP_129S1SvImJ_T0020348.1 MGP_129S1SvImJ_G0016115.1 mouse_genomes_project 1 67038856 67066665 - Kansl1l protein_coding processed_transcript MGP_129S1SvImJ_T0020349.1 MGP_129S1SvImJ_G0016115.1 mouse_genomes_project 1 67058626 67075374 - Kansl1l protein_coding retained_intron MGP_129S1SvImJ_T0099110.1 MGP_129S1SvImJ_G0037177.1 mouse_genomes_project 1 125427293 125427442 + Gm24547 snRNA snRNA MGP_129S1SvImJ_T0011874.1 MGP_129S1SvImJ_G0009963.1 mouse_genomes_project 1 1771638 1772269 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101580.1 MGP_129S1SvImJ_G0039642.1 mouse_genomes_project 1 79736527 79736676 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0022472.1 MGP_129S1SvImJ_G0016557.1 mouse_genomes_project 1 143790884 143908974 - MGP_129S1SvImJ_P0022472 Gm4788 protein_coding protein_coding MGP_129S1SvImJ_T0022473.1 MGP_129S1SvImJ_G0016557.1 mouse_genomes_project 1 143790884 143909049 - MGP_129S1SvImJ_P0022473 Gm4788 protein_coding protein_coding MGP_129S1SvImJ_T0022474.1 MGP_129S1SvImJ_G0016557.1 mouse_genomes_project 1 143790893 143909042 - MGP_129S1SvImJ_P0022474 Gm4788 protein_coding protein_coding MGP_129S1SvImJ_T0012376.1 MGP_129S1SvImJ_G0010465.1 mouse_genomes_project 1 190293889 190294240 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0019899.1 MGP_129S1SvImJ_G0016034.1 mouse_genomes_project 1 54971483 54982777 + MGP_129S1SvImJ_P0019899 Mars2 protein_coding protein_coding MGP_129S1SvImJ_T0022796.1 MGP_129S1SvImJ_G0016620.1 mouse_genomes_project 1 161039560 161134117 - MGP_129S1SvImJ_P0022796 Fam163a protein_coding protein_coding MGP_129S1SvImJ_T0100322.1 MGP_129S1SvImJ_G0038389.1 mouse_genomes_project 1 29503797 29503924 - Gm26145 snoRNA snoRNA MGP_129S1SvImJ_T0012058.1 MGP_129S1SvImJ_G0010147.1 mouse_genomes_project 1 57104245 57105222 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100368.1 MGP_129S1SvImJ_G0038435.1 mouse_genomes_project 1 126355716 126355847 - Gm24791 snoRNA snoRNA MGP_129S1SvImJ_T0000694.1 MGP_129S1SvImJ_G0000631.1 mouse_genomes_project 1 149714645 149721478 - TEC TEC MGP_129S1SvImJ_T0022733.1 MGP_129S1SvImJ_G0016611.1 mouse_genomes_project 1 160062790 160114152 + MGP_129S1SvImJ_P0022733 Stx6 protein_coding protein_coding MGP_129S1SvImJ_T0022734.1 MGP_129S1SvImJ_G0016611.1 mouse_genomes_project 1 160062794 160110437 + MGP_129S1SvImJ_P0022734 Stx6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022735.1 MGP_129S1SvImJ_G0016611.1 mouse_genomes_project 1 160062823 160106748 + MGP_129S1SvImJ_P0022735 Stx6 protein_coding protein_coding MGP_129S1SvImJ_T0022736.1 MGP_129S1SvImJ_G0016611.1 mouse_genomes_project 1 160062846 160100024 + Stx6 protein_coding processed_transcript MGP_129S1SvImJ_T0022737.1 MGP_129S1SvImJ_G0016611.1 mouse_genomes_project 1 160062874 160085086 + Stx6 protein_coding retained_intron MGP_129S1SvImJ_T0022738.1 MGP_129S1SvImJ_G0016611.1 mouse_genomes_project 1 160092825 160096850 + Stx6 protein_coding retained_intron MGP_129S1SvImJ_T0022739.1 MGP_129S1SvImJ_G0016611.1 mouse_genomes_project 1 160095893 160110515 + Stx6 protein_coding retained_intron MGP_129S1SvImJ_T0022740.1 MGP_129S1SvImJ_G0016611.1 mouse_genomes_project 1 160096337 160102265 + Stx6 protein_coding retained_intron MGP_129S1SvImJ_T0022741.1 MGP_129S1SvImJ_G0016611.1 mouse_genomes_project 1 160100005 160116704 + MGP_129S1SvImJ_P0022741 Stx6 protein_coding protein_coding MGP_129S1SvImJ_T0022742.1 MGP_129S1SvImJ_G0016611.1 mouse_genomes_project 1 160103523 160110740 + Stx6 protein_coding processed_transcript MGP_129S1SvImJ_T0005675.1 MGP_129S1SvImJ_G0004776.1 mouse_genomes_project 1 14646505 14663882 + lincRNA lincRNA MGP_129S1SvImJ_T0023368.1 MGP_129S1SvImJ_G0016740.1 mouse_genomes_project 1 176807635 176815681 - Fcgr3 protein_coding retained_intron MGP_129S1SvImJ_T0023369.1 MGP_129S1SvImJ_G0016740.1 mouse_genomes_project 1 176808804 176817735 - MGP_129S1SvImJ_P0023369 Fcgr3 protein_coding protein_coding MGP_129S1SvImJ_T0023370.1 MGP_129S1SvImJ_G0016740.1 mouse_genomes_project 1 176808824 176817735 - MGP_129S1SvImJ_P0023370 Fcgr3 protein_coding protein_coding MGP_129S1SvImJ_T0023371.1 MGP_129S1SvImJ_G0016740.1 mouse_genomes_project 1 176815454 176826797 - MGP_129S1SvImJ_P0023371 Fcgr3 protein_coding protein_coding MGP_129S1SvImJ_T0020106.1 MGP_129S1SvImJ_G0016070.1 mouse_genomes_project 1 59768546 59896145 + MGP_129S1SvImJ_P0020106 Bmpr2 protein_coding protein_coding MGP_129S1SvImJ_T0020107.1 MGP_129S1SvImJ_G0016070.1 mouse_genomes_project 1 59865615 59867546 + Bmpr2 protein_coding retained_intron MGP_129S1SvImJ_T0020108.1 MGP_129S1SvImJ_G0016070.1 mouse_genomes_project 1 59866671 59871390 + Bmpr2 protein_coding retained_intron MGP_129S1SvImJ_T0011269.1 MGP_129S1SvImJ_G0009385.1 mouse_genomes_project 1 70309521 70309796 - Gm22665 misc_RNA misc_RNA MGP_129S1SvImJ_T0017113.1 MGP_129S1SvImJ_G0015125.1 mouse_genomes_project 1 177511639 177516889 - A630035G10Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017114.1 MGP_129S1SvImJ_G0015125.1 mouse_genomes_project 1 177515075 177516932 - A630035G10Rik processed_transcript retained_intron MGP_129S1SvImJ_T0011937.1 MGP_129S1SvImJ_G0010026.1 mouse_genomes_project 1 19016261 19057766 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0020234.1 MGP_129S1SvImJ_G0016092.1 mouse_genomes_project 1 63901533 63927820 + MGP_129S1SvImJ_P0020234 Fastkd2 protein_coding protein_coding MGP_129S1SvImJ_T0020235.1 MGP_129S1SvImJ_G0016092.1 mouse_genomes_project 1 63901560 63907583 + Fastkd2 protein_coding retained_intron MGP_129S1SvImJ_T0020236.1 MGP_129S1SvImJ_G0016092.1 mouse_genomes_project 1 63901562 63925703 + Fastkd2 protein_coding retained_intron MGP_129S1SvImJ_T0020237.1 MGP_129S1SvImJ_G0016092.1 mouse_genomes_project 1 63907449 63921224 + Fastkd2 protein_coding processed_transcript MGP_129S1SvImJ_T0020238.1 MGP_129S1SvImJ_G0016092.1 mouse_genomes_project 1 63921187 63923442 + Fastkd2 protein_coding retained_intron MGP_129S1SvImJ_T0020239.1 MGP_129S1SvImJ_G0016092.1 mouse_genomes_project 1 63924386 63925630 + Fastkd2 protein_coding processed_transcript MGP_129S1SvImJ_T0021268.1 MGP_129S1SvImJ_G0016297.1 mouse_genomes_project 1 92444663 92480380 + MGP_129S1SvImJ_P0021268 Mlph protein_coding protein_coding MGP_129S1SvImJ_T0021269.1 MGP_129S1SvImJ_G0016297.1 mouse_genomes_project 1 92457254 92458008 + MGP_129S1SvImJ_P0021269 Mlph protein_coding protein_coding MGP_129S1SvImJ_T0021270.1 MGP_129S1SvImJ_G0016297.1 mouse_genomes_project 1 92468728 92469799 + Mlph protein_coding retained_intron MGP_129S1SvImJ_T0000430.1 MGP_129S1SvImJ_G0000370.1 mouse_genomes_project 1 21936037 21938837 + TEC TEC MGP_129S1SvImJ_T0018978.1 MGP_129S1SvImJ_G0015848.1 mouse_genomes_project 1 12521243 12521810 + MGP_129S1SvImJ_P0018978 protein_coding protein_coding MGP_129S1SvImJ_T0098419.1 MGP_129S1SvImJ_G0036504.1 mouse_genomes_project 1 91015092 91015207 + Gm25180 rRNA rRNA MGP_129S1SvImJ_T0000591.1 MGP_129S1SvImJ_G0000530.1 mouse_genomes_project 1 93481746 93485038 + TEC TEC MGP_129S1SvImJ_T0020793.1 MGP_129S1SvImJ_G0016192.1 mouse_genomes_project 1 76086480 76089769 + MGP_129S1SvImJ_P0020793 Inha protein_coding protein_coding MGP_129S1SvImJ_T0002975.1 MGP_129S1SvImJ_G0002796.1 mouse_genomes_project 1 178097446 178098446 + Gm37950 antisense antisense MGP_129S1SvImJ_T0012292.1 MGP_129S1SvImJ_G0010381.1 mouse_genomes_project 1 153534144 153534369 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022927.1 MGP_129S1SvImJ_G0016642.1 mouse_genomes_project 1 165395469 165406266 - MGP_129S1SvImJ_P0022927 Cacybp protein_coding protein_coding MGP_129S1SvImJ_T0022928.1 MGP_129S1SvImJ_G0016642.1 mouse_genomes_project 1 165399216 165406196 - MGP_129S1SvImJ_P0022928 Cacybp protein_coding protein_coding MGP_129S1SvImJ_T0022929.1 MGP_129S1SvImJ_G0016642.1 mouse_genomes_project 1 165401185 165406117 - Cacybp protein_coding retained_intron MGP_129S1SvImJ_T0099137.1 MGP_129S1SvImJ_G0037204.1 mouse_genomes_project 1 177573441 177573496 - Gm26412 snRNA snRNA MGP_129S1SvImJ_T0020257.1 MGP_129S1SvImJ_G0016097.1 mouse_genomes_project 1 64868496 64903672 + MGP_129S1SvImJ_P0020257 Ccnyl1 protein_coding protein_coding MGP_129S1SvImJ_T0020258.1 MGP_129S1SvImJ_G0016097.1 mouse_genomes_project 1 64868863 64901974 + MGP_129S1SvImJ_P0020258 Ccnyl1 protein_coding protein_coding MGP_129S1SvImJ_T0020259.1 MGP_129S1SvImJ_G0016097.1 mouse_genomes_project 1 64869224 64889498 + MGP_129S1SvImJ_P0020259 Ccnyl1 protein_coding protein_coding MGP_129S1SvImJ_T0020260.1 MGP_129S1SvImJ_G0016097.1 mouse_genomes_project 1 64869386 64903668 + MGP_129S1SvImJ_P0020260 Ccnyl1 protein_coding protein_coding MGP_129S1SvImJ_T0009503.1 MGP_129S1SvImJ_G0007619.1 mouse_genomes_project 1 63144175 63144280 + Gm44468 miRNA miRNA MGP_129S1SvImJ_T0000396.1 MGP_129S1SvImJ_G0000338.1 mouse_genomes_project 1 7231022 7233347 + TEC TEC MGP_129S1SvImJ_T0011999.1 MGP_129S1SvImJ_G0010088.1 mouse_genomes_project 1 39683244 39683740 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000577.1 MGP_129S1SvImJ_G0000516.1 mouse_genomes_project 1 88153211 88155995 + TEC TEC MGP_129S1SvImJ_T0016999.1 MGP_129S1SvImJ_G0015088.1 mouse_genomes_project 1 1528184 1531012 + Gm37587 processed_transcript retained_intron MGP_129S1SvImJ_T0017000.1 MGP_129S1SvImJ_G0015088.1 mouse_genomes_project 1 1529107 1531192 + Gm37587 processed_transcript antisense MGP_129S1SvImJ_T0019710.1 MGP_129S1SvImJ_G0016001.1 mouse_genomes_project 1 50384268 50398939 + Tmeff2 protein_coding processed_transcript MGP_129S1SvImJ_T0019711.1 MGP_129S1SvImJ_G0016001.1 mouse_genomes_project 1 50384268 50402313 + Tmeff2 protein_coding processed_transcript MGP_129S1SvImJ_T0019712.1 MGP_129S1SvImJ_G0016001.1 mouse_genomes_project 1 50394975 50470162 + MGP_129S1SvImJ_P0019712 Tmeff2 protein_coding protein_coding MGP_129S1SvImJ_T0019713.1 MGP_129S1SvImJ_G0016001.1 mouse_genomes_project 1 50414371 50685424 + MGP_129S1SvImJ_P0019713 Tmeff2 protein_coding protein_coding MGP_129S1SvImJ_T0022360.1 MGP_129S1SvImJ_G0016533.1 mouse_genomes_project 1 139802054 139831199 + MGP_129S1SvImJ_P0022360 Tmem9 protein_coding protein_coding MGP_129S1SvImJ_T0022361.1 MGP_129S1SvImJ_G0016533.1 mouse_genomes_project 1 139813694 139832274 + MGP_129S1SvImJ_P0022361 Tmem9 protein_coding protein_coding MGP_129S1SvImJ_T0022362.1 MGP_129S1SvImJ_G0016533.1 mouse_genomes_project 1 139813789 139831224 + MGP_129S1SvImJ_P0022362 Tmem9 protein_coding protein_coding MGP_129S1SvImJ_T0022363.1 MGP_129S1SvImJ_G0016533.1 mouse_genomes_project 1 139823942 139831331 + Tmem9 protein_coding retained_intron MGP_129S1SvImJ_T0022364.1 MGP_129S1SvImJ_G0016533.1 mouse_genomes_project 1 139830195 139831712 + Tmem9 protein_coding processed_transcript MGP_129S1SvImJ_T0098787.1 MGP_129S1SvImJ_G0036871.1 mouse_genomes_project 1 134819839 134822241 - Gm29488 sense_intronic sense_intronic MGP_129S1SvImJ_T0002802.1 MGP_129S1SvImJ_G0002664.1 mouse_genomes_project 1 36513740 36519858 + Gm26805 antisense antisense MGP_129S1SvImJ_T0006052.1 MGP_129S1SvImJ_G0005067.1 mouse_genomes_project 1 191387889 191394378 + 4930488B22Rik lincRNA lincRNA MGP_129S1SvImJ_T0005993.1 MGP_129S1SvImJ_G0005024.1 mouse_genomes_project 1 170155382 170162181 - Gm36945 lincRNA lincRNA MGP_129S1SvImJ_T0005994.1 MGP_129S1SvImJ_G0005024.1 mouse_genomes_project 1 170155559 170162209 - Gm36945 lincRNA lincRNA MGP_129S1SvImJ_T0022576.1 MGP_129S1SvImJ_G0016578.1 mouse_genomes_project 1 155214923 155660932 - MGP_129S1SvImJ_P0022576 Hmcn1 protein_coding protein_coding MGP_129S1SvImJ_T0022577.1 MGP_129S1SvImJ_G0016578.1 mouse_genomes_project 1 155215945 155660932 - MGP_129S1SvImJ_P0022577 Hmcn1 protein_coding protein_coding MGP_129S1SvImJ_T0022578.1 MGP_129S1SvImJ_G0016578.1 mouse_genomes_project 1 155216102 155236298 - MGP_129S1SvImJ_P0022578 Hmcn1 protein_coding protein_coding MGP_129S1SvImJ_T0022579.1 MGP_129S1SvImJ_G0016578.1 mouse_genomes_project 1 155216129 155218023 - Hmcn1 protein_coding retained_intron MGP_129S1SvImJ_T0022580.1 MGP_129S1SvImJ_G0016578.1 mouse_genomes_project 1 155230520 155233701 - Hmcn1 protein_coding processed_transcript MGP_129S1SvImJ_T0022581.1 MGP_129S1SvImJ_G0016578.1 mouse_genomes_project 1 155539393 155661316 - Hmcn1 protein_coding retained_intron MGP_129S1SvImJ_T0012330.1 MGP_129S1SvImJ_G0010419.1 mouse_genomes_project 1 169132430 169133472 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100375.1 MGP_129S1SvImJ_G0038442.1 mouse_genomes_project 1 141709725 141709841 + Gm22727 snoRNA snoRNA MGP_129S1SvImJ_T0012287.1 MGP_129S1SvImJ_G0010376.1 mouse_genomes_project 1 150861964 150862565 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021918.1 MGP_129S1SvImJ_G0016436.1 mouse_genomes_project 1 134020682 134050145 - MGP_129S1SvImJ_P0021918 C4bp protein_coding protein_coding MGP_129S1SvImJ_T0021919.1 MGP_129S1SvImJ_G0016436.1 mouse_genomes_project 1 134022723 134034271 - MGP_129S1SvImJ_P0021919 C4bp protein_coding protein_coding MGP_129S1SvImJ_T0021920.1 MGP_129S1SvImJ_G0016436.1 mouse_genomes_project 1 134028921 134050123 - MGP_129S1SvImJ_P0021920 C4bp protein_coding protein_coding MGP_129S1SvImJ_T0021921.1 MGP_129S1SvImJ_G0016436.1 mouse_genomes_project 1 134046292 134050137 - C4bp protein_coding retained_intron MGP_129S1SvImJ_T0100333.1 MGP_129S1SvImJ_G0038400.1 mouse_genomes_project 1 57243060 57243190 - Gm22371 snoRNA snoRNA MGP_129S1SvImJ_T0021969.1 MGP_129S1SvImJ_G0016451.1 mouse_genomes_project 1 134597816 134668459 - MGP_129S1SvImJ_P0021969 Rassf5 protein_coding protein_coding MGP_129S1SvImJ_T0021970.1 MGP_129S1SvImJ_G0016451.1 mouse_genomes_project 1 134599179 134622561 - MGP_129S1SvImJ_P0021970 Rassf5 protein_coding protein_coding MGP_129S1SvImJ_T0021971.1 MGP_129S1SvImJ_G0016451.1 mouse_genomes_project 1 134630074 134668592 - Rassf5 protein_coding processed_transcript MGP_129S1SvImJ_T0000709.1 MGP_129S1SvImJ_G0000646.1 mouse_genomes_project 1 158093711 158097052 - TEC TEC MGP_129S1SvImJ_T0012327.1 MGP_129S1SvImJ_G0010416.1 mouse_genomes_project 1 167642759 167643189 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100346.1 MGP_129S1SvImJ_G0038413.1 mouse_genomes_project 1 67528843 67528972 + Gm26342 snoRNA snoRNA MGP_129S1SvImJ_T0012138.1 MGP_129S1SvImJ_G0010227.1 mouse_genomes_project 1 84291509 84292297 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005790.1 MGP_129S1SvImJ_G0004863.1 mouse_genomes_project 1 69846343 69849775 - Gm29113 lincRNA lincRNA MGP_129S1SvImJ_T0002835.1 MGP_129S1SvImJ_G0002690.1 mouse_genomes_project 1 59504391 59506808 - 1700122D07Rik antisense antisense MGP_129S1SvImJ_T0019907.1 MGP_129S1SvImJ_G0016036.1 mouse_genomes_project 1 55126854 55499952 + MGP_129S1SvImJ_P0019907 Plcl1 protein_coding protein_coding MGP_129S1SvImJ_T0019908.1 MGP_129S1SvImJ_G0016036.1 mouse_genomes_project 1 55445445 55480740 + Plcl1 protein_coding processed_transcript MGP_129S1SvImJ_T0000402.1 MGP_129S1SvImJ_G0000344.1 mouse_genomes_project 1 8725423 8727894 + TEC TEC MGP_129S1SvImJ_T0019206.1 MGP_129S1SvImJ_G0015904.1 mouse_genomes_project 1 32129310 32182113 - MGP_129S1SvImJ_P0019206 Zfp451 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019207.1 MGP_129S1SvImJ_G0015904.1 mouse_genomes_project 1 32129310 32182255 - MGP_129S1SvImJ_P0019207 Zfp451 protein_coding protein_coding MGP_129S1SvImJ_T0019208.1 MGP_129S1SvImJ_G0015904.1 mouse_genomes_project 1 32145319 32173117 - MGP_129S1SvImJ_P0019208 Zfp451 protein_coding protein_coding MGP_129S1SvImJ_T0019209.1 MGP_129S1SvImJ_G0015904.1 mouse_genomes_project 1 32146827 32151710 - MGP_129S1SvImJ_P0019209 Zfp451 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0019210.1 MGP_129S1SvImJ_G0015904.1 mouse_genomes_project 1 32146960 32182154 - MGP_129S1SvImJ_P0019210 Zfp451 protein_coding protein_coding MGP_129S1SvImJ_T0019211.1 MGP_129S1SvImJ_G0015904.1 mouse_genomes_project 1 32149950 32181939 - Zfp451 protein_coding processed_transcript MGP_129S1SvImJ_T0019212.1 MGP_129S1SvImJ_G0015904.1 mouse_genomes_project 1 32154220 32168486 - Zfp451 protein_coding processed_transcript MGP_129S1SvImJ_T0019213.1 MGP_129S1SvImJ_G0015904.1 mouse_genomes_project 1 32159878 32182298 - MGP_129S1SvImJ_P0019213 Zfp451 protein_coding protein_coding MGP_129S1SvImJ_T0019214.1 MGP_129S1SvImJ_G0015904.1 mouse_genomes_project 1 32181254 32182323 - Zfp451 protein_coding retained_intron MGP_129S1SvImJ_T0023265.1 MGP_129S1SvImJ_G0016710.1 mouse_genomes_project 1 172690469 172692587 + MGP_129S1SvImJ_P0023265 Tspyl3 protein_coding protein_coding MGP_129S1SvImJ_T0102076.1 MGP_129S1SvImJ_G0039911.1 mouse_genomes_project 1 107335298 107335521 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0022401.1 MGP_129S1SvImJ_G0016542.1 mouse_genomes_project 1 140298668 140329052 + Kif14 protein_coding retained_intron MGP_129S1SvImJ_T0022402.1 MGP_129S1SvImJ_G0016542.1 mouse_genomes_project 1 140300261 140369748 + MGP_129S1SvImJ_P0022402 Kif14 protein_coding protein_coding MGP_129S1SvImJ_T0022403.1 MGP_129S1SvImJ_G0016542.1 mouse_genomes_project 1 140300261 140365882 + MGP_129S1SvImJ_P0022403 Kif14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022404.1 MGP_129S1SvImJ_G0016542.1 mouse_genomes_project 1 140300284 140369748 + MGP_129S1SvImJ_P0022404 Kif14 protein_coding protein_coding MGP_129S1SvImJ_T0022405.1 MGP_129S1SvImJ_G0016542.1 mouse_genomes_project 1 140301329 140304047 + Kif14 protein_coding retained_intron MGP_129S1SvImJ_T0022406.1 MGP_129S1SvImJ_G0016542.1 mouse_genomes_project 1 140308663 140312244 + Kif14 protein_coding processed_transcript MGP_129S1SvImJ_T0022407.1 MGP_129S1SvImJ_G0016542.1 mouse_genomes_project 1 140308663 140312244 + Kif14 protein_coding processed_transcript MGP_129S1SvImJ_T0022408.1 MGP_129S1SvImJ_G0016542.1 mouse_genomes_project 1 140308663 140312244 + MGP_129S1SvImJ_P0022408 Kif14 protein_coding protein_coding MGP_129S1SvImJ_T0005752.1 MGP_129S1SvImJ_G0004832.1 mouse_genomes_project 1 52085644 52095919 - Gm28178 lincRNA lincRNA MGP_129S1SvImJ_T0020959.1 MGP_129S1SvImJ_G0016227.1 mouse_genomes_project 1 85404886 85732401 - MGP_129S1SvImJ_P0020959 Dner protein_coding protein_coding MGP_129S1SvImJ_T0020960.1 MGP_129S1SvImJ_G0016227.1 mouse_genomes_project 1 85566386 85732199 - Dner protein_coding retained_intron MGP_129S1SvImJ_T0020961.1 MGP_129S1SvImJ_G0016227.1 mouse_genomes_project 1 85604752 85672638 - MGP_129S1SvImJ_P0020961 Dner protein_coding protein_coding MGP_129S1SvImJ_T0020962.1 MGP_129S1SvImJ_G0016227.1 mouse_genomes_project 1 85607041 85654795 - MGP_129S1SvImJ_P0020962 Dner protein_coding protein_coding MGP_129S1SvImJ_T0000730.1 MGP_129S1SvImJ_G0000667.1 mouse_genomes_project 1 164364738 164367587 + TEC TEC MGP_129S1SvImJ_T0102054.1 MGP_129S1SvImJ_G0039889.1 mouse_genomes_project 1 65645647 65646327 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0000736.1 MGP_129S1SvImJ_G0000673.1 mouse_genomes_project 1 165803755 165805013 - TEC TEC MGP_129S1SvImJ_T0099127.1 MGP_129S1SvImJ_G0037194.1 mouse_genomes_project 1 154326844 154326950 - Gm23535 snRNA snRNA MGP_129S1SvImJ_T0009508.1 MGP_129S1SvImJ_G0007624.1 mouse_genomes_project 1 64567125 64567194 + Gm25748 miRNA miRNA MGP_129S1SvImJ_T0020794.1 MGP_129S1SvImJ_G0016193.1 mouse_genomes_project 1 76107758 76125005 + MGP_129S1SvImJ_P0020794 Stk11ip protein_coding protein_coding MGP_129S1SvImJ_T0020795.1 MGP_129S1SvImJ_G0016193.1 mouse_genomes_project 1 76107781 76123318 + MGP_129S1SvImJ_P0020795 Stk11ip protein_coding protein_coding MGP_129S1SvImJ_T0020796.1 MGP_129S1SvImJ_G0016193.1 mouse_genomes_project 1 76108020 76123321 + Stk11ip protein_coding retained_intron MGP_129S1SvImJ_T0020797.1 MGP_129S1SvImJ_G0016193.1 mouse_genomes_project 1 76108040 76113338 + Stk11ip protein_coding retained_intron MGP_129S1SvImJ_T0020798.1 MGP_129S1SvImJ_G0016193.1 mouse_genomes_project 1 76114530 76115715 + Stk11ip protein_coding retained_intron MGP_129S1SvImJ_T0020799.1 MGP_129S1SvImJ_G0016193.1 mouse_genomes_project 1 76114865 76123321 + Stk11ip protein_coding retained_intron MGP_129S1SvImJ_T0020800.1 MGP_129S1SvImJ_G0016193.1 mouse_genomes_project 1 76115905 76118564 + Stk11ip protein_coding retained_intron MGP_129S1SvImJ_T0020801.1 MGP_129S1SvImJ_G0016193.1 mouse_genomes_project 1 76118757 76120484 + Stk11ip protein_coding retained_intron MGP_129S1SvImJ_T0020802.1 MGP_129S1SvImJ_G0016193.1 mouse_genomes_project 1 76119264 76120011 + Stk11ip protein_coding processed_transcript MGP_129S1SvImJ_T0100398.1 MGP_129S1SvImJ_G0038465.1 mouse_genomes_project 1 171061891 171062018 - Gm23208 snoRNA snoRNA MGP_129S1SvImJ_T0023013.1 MGP_129S1SvImJ_G0016656.1 mouse_genomes_project 1 167247891 167286534 - MGP_129S1SvImJ_P0023013 4930558K02Rik protein_coding protein_coding MGP_129S1SvImJ_T0023014.1 MGP_129S1SvImJ_G0016656.1 mouse_genomes_project 1 167247896 167276057 - 4930558K02Rik protein_coding processed_transcript MGP_129S1SvImJ_T0098724.1 MGP_129S1SvImJ_G0036809.1 mouse_genomes_project 1 130522720 130522849 + Gm23370 scaRNA scaRNA MGP_129S1SvImJ_T0002763.1 MGP_129S1SvImJ_G0002638.1 mouse_genomes_project 1 454128 501671 + Gm1992 antisense antisense MGP_129S1SvImJ_T0011928.1 MGP_129S1SvImJ_G0010017.1 mouse_genomes_project 1 15852967 15853955 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000777.1 MGP_129S1SvImJ_G0000714.1 mouse_genomes_project 1 183203304 183204836 - TEC TEC MGP_129S1SvImJ_T0012203.1 MGP_129S1SvImJ_G0010292.1 mouse_genomes_project 1 113736579 113737360 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0021942.1 MGP_129S1SvImJ_G0016443.1 mouse_genomes_project 1 134270062 134286463 + MGP_129S1SvImJ_P0021942 Fcmr protein_coding protein_coding MGP_129S1SvImJ_T0021943.1 MGP_129S1SvImJ_G0016443.1 mouse_genomes_project 1 134270173 134280882 + Fcmr protein_coding processed_transcript MGP_129S1SvImJ_T0021944.1 MGP_129S1SvImJ_G0016443.1 mouse_genomes_project 1 134283919 134286451 + Fcmr protein_coding processed_transcript MGP_129S1SvImJ_T0021945.1 MGP_129S1SvImJ_G0016443.1 mouse_genomes_project 1 134284092 134286462 + Fcmr protein_coding processed_transcript MGP_129S1SvImJ_T0005666.1 MGP_129S1SvImJ_G0004771.1 mouse_genomes_project 1 6874604 6875924 - Gm29520 lincRNA lincRNA MGP_129S1SvImJ_T0022323.1 MGP_129S1SvImJ_G0016527.1 mouse_genomes_project 1 139548900 139551926 + MGP_129S1SvImJ_P0022323 Phlda3 protein_coding protein_coding MGP_129S1SvImJ_T0022324.1 MGP_129S1SvImJ_G0016527.1 mouse_genomes_project 1 139549915 139551713 + Phlda3 protein_coding processed_transcript MGP_129S1SvImJ_T0012282.1 MGP_129S1SvImJ_G0010371.1 mouse_genomes_project 1 148681240 148681645 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024165.1 MGP_129S1SvImJ_G0016929.1 mouse_genomes_project 1 196651482 196812351 + MGP_129S1SvImJ_P0024165 Ptpn14 protein_coding protein_coding MGP_129S1SvImJ_T0024166.1 MGP_129S1SvImJ_G0016929.1 mouse_genomes_project 1 196651489 196771702 + Ptpn14 protein_coding retained_intron MGP_129S1SvImJ_T0024167.1 MGP_129S1SvImJ_G0016929.1 mouse_genomes_project 1 196714724 196783079 + Ptpn14 protein_coding retained_intron MGP_129S1SvImJ_T0024168.1 MGP_129S1SvImJ_G0016929.1 mouse_genomes_project 1 196714760 196805753 + MGP_129S1SvImJ_P0024168 Ptpn14 protein_coding protein_coding MGP_129S1SvImJ_T0024169.1 MGP_129S1SvImJ_G0016929.1 mouse_genomes_project 1 196776136 196783566 + Ptpn14 protein_coding retained_intron MGP_129S1SvImJ_T0024170.1 MGP_129S1SvImJ_G0016929.1 mouse_genomes_project 1 196797188 196797963 + Ptpn14 protein_coding processed_transcript MGP_129S1SvImJ_T0011279.1 MGP_129S1SvImJ_G0009395.1 mouse_genomes_project 1 182946108 182946373 + Gm25288 misc_RNA misc_RNA MGP_129S1SvImJ_T0022043.1 MGP_129S1SvImJ_G0016466.1 mouse_genomes_project 1 135579319 135606115 - MGP_129S1SvImJ_P0022043 Cdk18 protein_coding protein_coding MGP_129S1SvImJ_T0022044.1 MGP_129S1SvImJ_G0016466.1 mouse_genomes_project 1 135581670 135583998 - Cdk18 protein_coding retained_intron MGP_129S1SvImJ_T0022045.1 MGP_129S1SvImJ_G0016466.1 mouse_genomes_project 1 135581848 135606036 - MGP_129S1SvImJ_P0022045 Cdk18 protein_coding protein_coding MGP_129S1SvImJ_T0022046.1 MGP_129S1SvImJ_G0016466.1 mouse_genomes_project 1 135581915 135583775 - MGP_129S1SvImJ_P0022046 Cdk18 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0022047.1 MGP_129S1SvImJ_G0016466.1 mouse_genomes_project 1 135582018 135583340 - Cdk18 protein_coding retained_intron MGP_129S1SvImJ_T0012213.1 MGP_129S1SvImJ_G0010302.1 mouse_genomes_project 1 116021189 116021725 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0022633.1 MGP_129S1SvImJ_G0016588.1 mouse_genomes_project 1 157277881 157536037 - MGP_129S1SvImJ_P0022633 Rgl1 protein_coding protein_coding MGP_129S1SvImJ_T0022634.1 MGP_129S1SvImJ_G0016588.1 mouse_genomes_project 1 157278072 157386885 - MGP_129S1SvImJ_P0022634 Rgl1 protein_coding protein_coding MGP_129S1SvImJ_T0022635.1 MGP_129S1SvImJ_G0016588.1 mouse_genomes_project 1 157279880 157536083 - MGP_129S1SvImJ_P0022635 Rgl1 protein_coding protein_coding MGP_129S1SvImJ_T0022636.1 MGP_129S1SvImJ_G0016588.1 mouse_genomes_project 1 157313140 157314677 - Rgl1 protein_coding retained_intron MGP_129S1SvImJ_T0022637.1 MGP_129S1SvImJ_G0016588.1 mouse_genomes_project 1 157319412 157354531 - Rgl1 protein_coding processed_transcript MGP_129S1SvImJ_T0022638.1 MGP_129S1SvImJ_G0016588.1 mouse_genomes_project 1 157319412 157386697 - MGP_129S1SvImJ_P0022638 Rgl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0000723.1 MGP_129S1SvImJ_G0000660.1 mouse_genomes_project 1 162038586 162040915 + TEC TEC MGP_129S1SvImJ_T0012304.1 MGP_129S1SvImJ_G0010393.1 mouse_genomes_project 1 157172093 157172545 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0023719.1 MGP_129S1SvImJ_G0016840.1 mouse_genomes_project 1 181800055 181851899 + Wdr64 protein_coding processed_transcript MGP_129S1SvImJ_T0023720.1 MGP_129S1SvImJ_G0016840.1 mouse_genomes_project 1 181800055 181924652 + MGP_129S1SvImJ_P0023720 Wdr64 protein_coding protein_coding MGP_129S1SvImJ_T0023721.1 MGP_129S1SvImJ_G0016840.1 mouse_genomes_project 1 181800055 181924652 + MGP_129S1SvImJ_P0023721 Wdr64 protein_coding protein_coding MGP_129S1SvImJ_T0023722.1 MGP_129S1SvImJ_G0016840.1 mouse_genomes_project 1 181800251 181924284 + MGP_129S1SvImJ_P0023722 Wdr64 protein_coding protein_coding MGP_129S1SvImJ_T0023723.1 MGP_129S1SvImJ_G0016840.1 mouse_genomes_project 1 181875347 181924649 + MGP_129S1SvImJ_P0023723 Wdr64 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0006001.1 MGP_129S1SvImJ_G0005029.1 mouse_genomes_project 1 171519496 171558018 + Gm26665 lincRNA lincRNA MGP_129S1SvImJ_T0020207.1 MGP_129S1SvImJ_G0016086.1 mouse_genomes_project 1 63319558 63323220 + MGP_129S1SvImJ_P0020207 Eef1b2 protein_coding protein_coding MGP_129S1SvImJ_T0020208.1 MGP_129S1SvImJ_G0016086.1 mouse_genomes_project 1 63319862 63322096 + MGP_129S1SvImJ_P0020208 Eef1b2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020209.1 MGP_129S1SvImJ_G0016086.1 mouse_genomes_project 1 63319863 63322390 + MGP_129S1SvImJ_P0020209 Eef1b2 protein_coding protein_coding MGP_129S1SvImJ_T0020210.1 MGP_129S1SvImJ_G0016086.1 mouse_genomes_project 1 63319864 63321243 + Eef1b2 protein_coding processed_transcript MGP_129S1SvImJ_T0020211.1 MGP_129S1SvImJ_G0016086.1 mouse_genomes_project 1 63319878 63322302 + MGP_129S1SvImJ_P0020211 Eef1b2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020212.1 MGP_129S1SvImJ_G0016086.1 mouse_genomes_project 1 63319878 63322356 + MGP_129S1SvImJ_P0020212 Eef1b2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020213.1 MGP_129S1SvImJ_G0016086.1 mouse_genomes_project 1 63319880 63321157 + Eef1b2 protein_coding processed_transcript MGP_129S1SvImJ_T0020214.1 MGP_129S1SvImJ_G0016086.1 mouse_genomes_project 1 63319918 63321613 + MGP_129S1SvImJ_P0020214 Eef1b2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0020215.1 MGP_129S1SvImJ_G0016086.1 mouse_genomes_project 1 63319956 63321632 + MGP_129S1SvImJ_P0020215 Eef1b2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0000515.1 MGP_129S1SvImJ_G0000454.1 mouse_genomes_project 1 61072629 61075114 + TEC TEC MGP_129S1SvImJ_T0023152.1 MGP_129S1SvImJ_G0016688.1 mouse_genomes_project 1 170605824 170631842 - MGP_129S1SvImJ_P0023152 Tbx19 protein_coding protein_coding MGP_129S1SvImJ_T0023153.1 MGP_129S1SvImJ_G0016688.1 mouse_genomes_project 1 170606858 170618642 - Tbx19 protein_coding processed_transcript MGP_129S1SvImJ_T0023154.1 MGP_129S1SvImJ_G0016688.1 mouse_genomes_project 1 170606916 170624799 - MGP_129S1SvImJ_P0023154 Tbx19 protein_coding protein_coding MGP_129S1SvImJ_T0023155.1 MGP_129S1SvImJ_G0016688.1 mouse_genomes_project 1 170610408 170618327 - Tbx19 protein_coding processed_transcript MGP_129S1SvImJ_T0024355.1 MGP_129S1SvImJ_G0016965.1 mouse_genomes_project 1 201772936 201775564 + Plxna2 protein_coding retained_intron MGP_129S1SvImJ_T0024356.1 MGP_129S1SvImJ_G0016965.1 mouse_genomes_project 1 201774521 201979146 + MGP_129S1SvImJ_P0024356 Plxna2 protein_coding protein_coding MGP_129S1SvImJ_T0024357.1 MGP_129S1SvImJ_G0016965.1 mouse_genomes_project 1 201799312 201812225 + Plxna2 protein_coding processed_transcript MGP_129S1SvImJ_T0024358.1 MGP_129S1SvImJ_G0016965.1 mouse_genomes_project 1 201921192 201945899 + MGP_129S1SvImJ_P0024358 Plxna2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024359.1 MGP_129S1SvImJ_G0016965.1 mouse_genomes_project 1 201965206 201976502 + Plxna2 protein_coding retained_intron MGP_129S1SvImJ_T0100340.1 MGP_129S1SvImJ_G0038407.1 mouse_genomes_project 1 63151139 63151253 + Gm24942 snoRNA snoRNA MGP_129S1SvImJ_T0011995.1 MGP_129S1SvImJ_G0010084.1 mouse_genomes_project 1 38004766 38005049 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100308.1 MGP_129S1SvImJ_G0038375.1 mouse_genomes_project 1 8234703 8234794 + Gm22963 snoRNA snoRNA MGP_129S1SvImJ_T0022180.1 MGP_129S1SvImJ_G0016494.1 mouse_genomes_project 1 137528181 137532310 - Optc protein_coding retained_intron MGP_129S1SvImJ_T0022181.1 MGP_129S1SvImJ_G0016494.1 mouse_genomes_project 1 137528181 137538138 - MGP_129S1SvImJ_P0022181 Optc protein_coding protein_coding MGP_129S1SvImJ_T0022182.1 MGP_129S1SvImJ_G0016494.1 mouse_genomes_project 1 137528182 137538965 - MGP_129S1SvImJ_P0022182 Optc protein_coding protein_coding MGP_129S1SvImJ_T0022183.1 MGP_129S1SvImJ_G0016494.1 mouse_genomes_project 1 137528681 137538092 - MGP_129S1SvImJ_P0022183 Optc protein_coding protein_coding MGP_129S1SvImJ_T0022184.1 MGP_129S1SvImJ_G0016494.1 mouse_genomes_project 1 137531816 137537968 - MGP_129S1SvImJ_P0022184 Optc protein_coding protein_coding MGP_129S1SvImJ_T0005690.1 MGP_129S1SvImJ_G0004790.1 mouse_genomes_project 1 28907358 28908762 - Gm9898 lincRNA lincRNA MGP_129S1SvImJ_T0100318.1 MGP_129S1SvImJ_G0038385.1 mouse_genomes_project 1 18544270 18544401 - Gm24171 snoRNA snoRNA MGP_129S1SvImJ_T0020057.1 MGP_129S1SvImJ_G0016063.1 mouse_genomes_project 1 59069195 59106965 - MGP_129S1SvImJ_P0020057 Mpp4 protein_coding protein_coding MGP_129S1SvImJ_T0020058.1 MGP_129S1SvImJ_G0016063.1 mouse_genomes_project 1 59069195 59109933 - MGP_129S1SvImJ_P0020058 Mpp4 protein_coding protein_coding MGP_129S1SvImJ_T0020059.1 MGP_129S1SvImJ_G0016063.1 mouse_genomes_project 1 59069195 59111700 - MGP_129S1SvImJ_P0020059 Mpp4 protein_coding protein_coding MGP_129S1SvImJ_T0020060.1 MGP_129S1SvImJ_G0016063.1 mouse_genomes_project 1 59069196 59109933 - MGP_129S1SvImJ_P0020060 Mpp4 protein_coding protein_coding MGP_129S1SvImJ_T0020061.1 MGP_129S1SvImJ_G0016063.1 mouse_genomes_project 1 59069200 59095060 - Mpp4 protein_coding processed_transcript MGP_129S1SvImJ_T0020062.1 MGP_129S1SvImJ_G0016063.1 mouse_genomes_project 1 59069404 59106958 - MGP_129S1SvImJ_P0020062 Mpp4 protein_coding protein_coding MGP_129S1SvImJ_T0020063.1 MGP_129S1SvImJ_G0016063.1 mouse_genomes_project 1 59069513 59109864 - Mpp4 protein_coding retained_intron MGP_129S1SvImJ_T0020064.1 MGP_129S1SvImJ_G0016063.1 mouse_genomes_project 1 59087420 59101599 - Mpp4 protein_coding retained_intron MGP_129S1SvImJ_T0020065.1 MGP_129S1SvImJ_G0016063.1 mouse_genomes_project 1 59087422 59099890 - Mpp4 protein_coding retained_intron MGP_129S1SvImJ_T0020066.1 MGP_129S1SvImJ_G0016063.1 mouse_genomes_project 1 59097381 59109869 - Mpp4 protein_coding retained_intron MGP_129S1SvImJ_T0009556.1 MGP_129S1SvImJ_G0007672.1 mouse_genomes_project 1 165493946 165494055 - Mir1927 miRNA miRNA MGP_129S1SvImJ_T0024100.1 MGP_129S1SvImJ_G0016918.1 mouse_genomes_project 1 192834550 192858096 - MGP_129S1SvImJ_P0024100 Lyplal1 protein_coding protein_coding MGP_129S1SvImJ_T0024101.1 MGP_129S1SvImJ_G0016918.1 mouse_genomes_project 1 192835352 192858074 - Lyplal1 protein_coding processed_transcript MGP_129S1SvImJ_T0005905.1 MGP_129S1SvImJ_G0004954.1 mouse_genomes_project 1 123904108 123939266 + Celrr lincRNA lincRNA MGP_129S1SvImJ_T0005906.1 MGP_129S1SvImJ_G0004954.1 mouse_genomes_project 1 123904174 123936004 + Celrr lincRNA lincRNA MGP_129S1SvImJ_T0005907.1 MGP_129S1SvImJ_G0004954.1 mouse_genomes_project 1 123904177 124001219 + Celrr lincRNA lincRNA MGP_129S1SvImJ_T0005908.1 MGP_129S1SvImJ_G0004954.1 mouse_genomes_project 1 123904232 123905636 + Celrr lincRNA lincRNA MGP_129S1SvImJ_T0021541.1 MGP_129S1SvImJ_G0016356.1 mouse_genomes_project 1 98541650 98603078 - MGP_129S1SvImJ_P0021541 Slco4c1 protein_coding protein_coding MGP_129S1SvImJ_T0002822.1 MGP_129S1SvImJ_G0002680.1 mouse_genomes_project 1 50717506 50832163 - 9330175M20Rik antisense antisense MGP_129S1SvImJ_T0100393.1 MGP_129S1SvImJ_G0038460.1 mouse_genomes_project 1 166289179 166289256 + Snord47 snoRNA snoRNA MGP_129S1SvImJ_T0012387.1 MGP_129S1SvImJ_G0010476.1 mouse_genomes_project 1 198016363 198016789 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000482.1 MGP_129S1SvImJ_G0000421.1 mouse_genomes_project 1 38830079 38831420 - TEC TEC MGP_129S1SvImJ_T0099089.1 MGP_129S1SvImJ_G0037156.1 mouse_genomes_project 1 67113729 67113789 + Gm27934 snRNA snRNA MGP_129S1SvImJ_T0000651.1 MGP_129S1SvImJ_G0000590.1 mouse_genomes_project 1 134498454 134504285 - TEC TEC MGP_129S1SvImJ_T0024072.1 MGP_129S1SvImJ_G0016912.1 mouse_genomes_project 1 191596711 191707388 - MGP_129S1SvImJ_P0024072 Mark1 protein_coding protein_coding MGP_129S1SvImJ_T0024073.1 MGP_129S1SvImJ_G0016912.1 mouse_genomes_project 1 191621223 191707293 - MGP_129S1SvImJ_P0024073 Mark1 protein_coding protein_coding MGP_129S1SvImJ_T0005869.1 MGP_129S1SvImJ_G0004926.1 mouse_genomes_project 1 98341714 98400754 - 4930533P14Rik lincRNA lincRNA MGP_129S1SvImJ_T0002893.1 MGP_129S1SvImJ_G0002732.1 mouse_genomes_project 1 124324962 124328870 - Gm15392 antisense antisense MGP_129S1SvImJ_T0019091.1 MGP_129S1SvImJ_G0015879.1 mouse_genomes_project 1 19009380 19011780 + MGP_129S1SvImJ_P0019091 protein_coding protein_coding MGP_129S1SvImJ_T0022892.1 MGP_129S1SvImJ_G0016636.1 mouse_genomes_project 1 163816606 164080319 - MGP_129S1SvImJ_P0022892 Pappa2 protein_coding protein_coding MGP_129S1SvImJ_T0022893.1 MGP_129S1SvImJ_G0016636.1 mouse_genomes_project 1 163873710 163925480 - MGP_129S1SvImJ_P0022893 Pappa2 protein_coding protein_coding MGP_129S1SvImJ_T0022894.1 MGP_129S1SvImJ_G0016636.1 mouse_genomes_project 1 163925284 163958256 - Pappa2 protein_coding retained_intron MGP_129S1SvImJ_T0022895.1 MGP_129S1SvImJ_G0016636.1 mouse_genomes_project 1 163943654 163953556 - Pappa2 protein_coding processed_transcript MGP_129S1SvImJ_T0022896.1 MGP_129S1SvImJ_G0016636.1 mouse_genomes_project 1 164080027 164082293 - Pappa2 protein_coding processed_transcript MGP_129S1SvImJ_T0022897.1 MGP_129S1SvImJ_G0016636.1 mouse_genomes_project 1 164080078 164104591 - Pappa2 protein_coding processed_transcript MGP_129S1SvImJ_T0022712.1 MGP_129S1SvImJ_G0016605.1 mouse_genomes_project 1 158753360 158754981 + MGP_129S1SvImJ_P0022712 Teddm1a protein_coding protein_coding MGP_129S1SvImJ_T0002817.1 MGP_129S1SvImJ_G0002676.1 mouse_genomes_project 1 42059621 42060869 + 8430432A02Rik antisense antisense MGP_129S1SvImJ_T0011978.1 MGP_129S1SvImJ_G0010067.1 mouse_genomes_project 1 32935956 32936431 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012194.1 MGP_129S1SvImJ_G0010283.1 mouse_genomes_project 1 110646122 110647395 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002824.1 MGP_129S1SvImJ_G0002682.1 mouse_genomes_project 1 54369327 54427223 + 4930444A19Rik antisense antisense MGP_129S1SvImJ_T0002825.1 MGP_129S1SvImJ_G0002682.1 mouse_genomes_project 1 54378612 54459373 + 4930444A19Rik antisense antisense MGP_129S1SvImJ_T0055800.1 MGP_129S1SvImJ_G0026006.1 mouse_genomes_project 2 88418756 88419737 + MGP_129S1SvImJ_P0055800 Olfr1122 protein_coding protein_coding MGP_129S1SvImJ_T0013856.1 MGP_129S1SvImJ_G0011945.1 mouse_genomes_project 2 161835977 161836521 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013830.1 MGP_129S1SvImJ_G0011919.1 mouse_genomes_project 2 154909827 154910582 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010414.1 MGP_129S1SvImJ_G0008530.1 mouse_genomes_project 2 30597735 30597814 + Gm27805 miRNA miRNA MGP_129S1SvImJ_T0057828.1 MGP_129S1SvImJ_G0026537.1 mouse_genomes_project 2 135547218 135588430 - MGP_129S1SvImJ_P0057828 Rassf2 protein_coding protein_coding MGP_129S1SvImJ_T0057829.1 MGP_129S1SvImJ_G0026537.1 mouse_genomes_project 2 135550582 135588630 - MGP_129S1SvImJ_P0057829 Rassf2 protein_coding protein_coding MGP_129S1SvImJ_T0057830.1 MGP_129S1SvImJ_G0026537.1 mouse_genomes_project 2 135559404 135579602 - Rassf2 protein_coding retained_intron MGP_129S1SvImJ_T0057831.1 MGP_129S1SvImJ_G0026537.1 mouse_genomes_project 2 135561387 135588686 - MGP_129S1SvImJ_P0057831 Rassf2 protein_coding protein_coding MGP_129S1SvImJ_T0057832.1 MGP_129S1SvImJ_G0026537.1 mouse_genomes_project 2 135568190 135587595 - MGP_129S1SvImJ_P0057832 Rassf2 protein_coding protein_coding MGP_129S1SvImJ_T0004106.1 MGP_129S1SvImJ_G0003638.1 mouse_genomes_project 2 134672306 134684085 + Gm14232 antisense antisense MGP_129S1SvImJ_T0059528.1 MGP_129S1SvImJ_G0026944.1 mouse_genomes_project 2 178566629 178601889 + MGP_129S1SvImJ_P0059528 Cass4 protein_coding protein_coding MGP_129S1SvImJ_T0059529.1 MGP_129S1SvImJ_G0026944.1 mouse_genomes_project 2 178566656 178606089 + MGP_129S1SvImJ_P0059529 Cass4 protein_coding protein_coding MGP_129S1SvImJ_T0059530.1 MGP_129S1SvImJ_G0026944.1 mouse_genomes_project 2 178566735 178605193 + MGP_129S1SvImJ_P0059530 Cass4 protein_coding protein_coding MGP_129S1SvImJ_T0059531.1 MGP_129S1SvImJ_G0026944.1 mouse_genomes_project 2 178566805 178604976 + MGP_129S1SvImJ_P0059531 Cass4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0054938.1 MGP_129S1SvImJ_G0025764.1 mouse_genomes_project 2 60354962 60490994 - MGP_129S1SvImJ_P0054938 Rbms1 protein_coding protein_coding MGP_129S1SvImJ_T0054939.1 MGP_129S1SvImJ_G0025764.1 mouse_genomes_project 2 60354968 60580342 - MGP_129S1SvImJ_P0054939 Rbms1 protein_coding protein_coding MGP_129S1SvImJ_T0054940.1 MGP_129S1SvImJ_G0025764.1 mouse_genomes_project 2 60358333 60367066 - Rbms1 protein_coding processed_transcript MGP_129S1SvImJ_T0054941.1 MGP_129S1SvImJ_G0025764.1 mouse_genomes_project 2 60360187 60386677 - Rbms1 protein_coding processed_transcript MGP_129S1SvImJ_T0054942.1 MGP_129S1SvImJ_G0025764.1 mouse_genomes_project 2 60451316 60499354 - Rbms1 protein_coding processed_transcript MGP_129S1SvImJ_T0054943.1 MGP_129S1SvImJ_G0025764.1 mouse_genomes_project 2 60451316 60500329 - Rbms1 protein_coding processed_transcript MGP_129S1SvImJ_T0054944.1 MGP_129S1SvImJ_G0025764.1 mouse_genomes_project 2 60499510 60499807 - Rbms1 protein_coding processed_transcript MGP_129S1SvImJ_T0054945.1 MGP_129S1SvImJ_G0025764.1 mouse_genomes_project 2 60499722 60500295 - Rbms1 protein_coding processed_transcript MGP_129S1SvImJ_T0059520.1 MGP_129S1SvImJ_G0026940.1 mouse_genomes_project 2 178411508 178414135 + MGP_129S1SvImJ_P0059520 Mc3r protein_coding protein_coding MGP_129S1SvImJ_T0010415.1 MGP_129S1SvImJ_G0008531.1 mouse_genomes_project 2 30763833 30763912 + Gm23363 miRNA miRNA MGP_129S1SvImJ_T0013779.1 MGP_129S1SvImJ_G0011868.1 mouse_genomes_project 2 134981581 134982094 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056655.1 MGP_129S1SvImJ_G0026270.1 mouse_genomes_project 2 114132360 114133299 + MGP_129S1SvImJ_P0056655 protein_coding protein_coding MGP_129S1SvImJ_T0098562.1 MGP_129S1SvImJ_G0036647.1 mouse_genomes_project 2 85385864 85385977 - n-R5s200 rRNA rRNA MGP_129S1SvImJ_T0004195.1 MGP_129S1SvImJ_G0003707.1 mouse_genomes_project 2 178188083 178193091 + Gm14271 antisense antisense MGP_129S1SvImJ_T0055423.1 MGP_129S1SvImJ_G0025863.1 mouse_genomes_project 2 76749559 76757763 - MGP_129S1SvImJ_P0055423 Cyct protein_coding protein_coding MGP_129S1SvImJ_T0052387.1 MGP_129S1SvImJ_G0025318.1 mouse_genomes_project 2 2059663 2075518 + MGP_129S1SvImJ_P0052387 Ucma protein_coding protein_coding MGP_129S1SvImJ_T0052388.1 MGP_129S1SvImJ_G0025318.1 mouse_genomes_project 2 2059666 2071090 + Ucma protein_coding processed_transcript MGP_129S1SvImJ_T0052389.1 MGP_129S1SvImJ_G0025318.1 mouse_genomes_project 2 2059692 2075510 + MGP_129S1SvImJ_P0052389 Ucma protein_coding protein_coding MGP_129S1SvImJ_T0052390.1 MGP_129S1SvImJ_G0025318.1 mouse_genomes_project 2 2059722 2075515 + MGP_129S1SvImJ_P0052390 Ucma protein_coding protein_coding MGP_129S1SvImJ_T0052391.1 MGP_129S1SvImJ_G0025318.1 mouse_genomes_project 2 2059725 2075415 + MGP_129S1SvImJ_P0052391 Ucma protein_coding protein_coding MGP_129S1SvImJ_T0058536.1 MGP_129S1SvImJ_G0026730.1 mouse_genomes_project 2 160043044 160060842 + Dynlrb1 protein_coding processed_transcript MGP_129S1SvImJ_T0058537.1 MGP_129S1SvImJ_G0026730.1 mouse_genomes_project 2 160043046 160060847 + MGP_129S1SvImJ_P0058537 Dynlrb1 protein_coding protein_coding MGP_129S1SvImJ_T0058538.1 MGP_129S1SvImJ_G0026730.1 mouse_genomes_project 2 160043119 160060705 + MGP_129S1SvImJ_P0058538 Dynlrb1 protein_coding protein_coding MGP_129S1SvImJ_T0058539.1 MGP_129S1SvImJ_G0026730.1 mouse_genomes_project 2 160043322 160060650 + Dynlrb1 protein_coding processed_transcript MGP_129S1SvImJ_T0059496.1 MGP_129S1SvImJ_G0026932.1 mouse_genomes_project 2 175617895 175914853 + MGP_129S1SvImJ_P0059496 Tshz2 protein_coding protein_coding MGP_129S1SvImJ_T0059497.1 MGP_129S1SvImJ_G0026932.1 mouse_genomes_project 2 175618552 175887761 + MGP_129S1SvImJ_P0059497 Tshz2 protein_coding protein_coding MGP_129S1SvImJ_T0059498.1 MGP_129S1SvImJ_G0026932.1 mouse_genomes_project 2 175884149 176085971 + MGP_129S1SvImJ_P0059498 Tshz2 protein_coding protein_coding MGP_129S1SvImJ_T0059499.1 MGP_129S1SvImJ_G0026932.1 mouse_genomes_project 2 175884149 176085971 + MGP_129S1SvImJ_P0059499 Tshz2 protein_coding protein_coding MGP_129S1SvImJ_T0059500.1 MGP_129S1SvImJ_G0026932.1 mouse_genomes_project 2 175885091 175914853 + MGP_129S1SvImJ_P0059500 Tshz2 protein_coding protein_coding MGP_129S1SvImJ_T0013576.1 MGP_129S1SvImJ_G0011665.1 mouse_genomes_project 2 60196648 60196895 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058910.1 MGP_129S1SvImJ_G0026791.1 mouse_genomes_project 2 163322448 163353836 + MGP_129S1SvImJ_P0058910 Bpi protein_coding protein_coding MGP_129S1SvImJ_T0058911.1 MGP_129S1SvImJ_G0026791.1 mouse_genomes_project 2 163322448 163353700 + MGP_129S1SvImJ_P0058911 Bpi protein_coding protein_coding MGP_129S1SvImJ_T0058912.1 MGP_129S1SvImJ_G0026791.1 mouse_genomes_project 2 163322448 163353839 + MGP_129S1SvImJ_P0058912 Bpi protein_coding protein_coding MGP_129S1SvImJ_T0003925.1 MGP_129S1SvImJ_G0003509.1 mouse_genomes_project 2 15196732 15197671 + Gm13324 antisense antisense MGP_129S1SvImJ_T0007254.1 MGP_129S1SvImJ_G0005952.1 mouse_genomes_project 2 78525106 78543940 + lincRNA lincRNA MGP_129S1SvImJ_T0007255.1 MGP_129S1SvImJ_G0005952.1 mouse_genomes_project 2 78525152 78666861 + lincRNA lincRNA MGP_129S1SvImJ_T0058127.1 MGP_129S1SvImJ_G0026604.1 mouse_genomes_project 2 151642452 151648406 + MGP_129S1SvImJ_P0058127 Pax1 protein_coding protein_coding MGP_129S1SvImJ_T0058128.1 MGP_129S1SvImJ_G0026604.1 mouse_genomes_project 2 151645521 151655929 + MGP_129S1SvImJ_P0058128 Pax1 protein_coding protein_coding MGP_129S1SvImJ_T0058129.1 MGP_129S1SvImJ_G0026604.1 mouse_genomes_project 2 151648809 151675944 + Pax1 protein_coding retained_intron MGP_129S1SvImJ_T0013575.1 MGP_129S1SvImJ_G0011664.1 mouse_genomes_project 2 60184547 60185689 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055734.1 MGP_129S1SvImJ_G0025943.1 mouse_genomes_project 2 86670371 86672094 + MGP_129S1SvImJ_P0055734 Olfr1023 protein_coding protein_coding MGP_129S1SvImJ_T0013485.1 MGP_129S1SvImJ_G0011574.1 mouse_genomes_project 2 26893753 26893877 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099700.1 MGP_129S1SvImJ_G0037767.1 mouse_genomes_project 2 136655691 136655859 + Gm25704 snRNA snRNA MGP_129S1SvImJ_T0001046.1 MGP_129S1SvImJ_G0000975.1 mouse_genomes_project 2 6948845 6949541 - TEC TEC MGP_129S1SvImJ_T0004095.1 MGP_129S1SvImJ_G0003632.1 mouse_genomes_project 2 132108060 132110495 - Gm14011 antisense antisense MGP_129S1SvImJ_T0001103.1 MGP_129S1SvImJ_G0001032.1 mouse_genomes_project 2 68812260 68815817 + TEC TEC MGP_129S1SvImJ_T0053038.1 MGP_129S1SvImJ_G0025425.1 mouse_genomes_project 2 23083096 23086598 + MGP_129S1SvImJ_P0053038 Fam166a protein_coding protein_coding MGP_129S1SvImJ_T0053039.1 MGP_129S1SvImJ_G0025425.1 mouse_genomes_project 2 23085709 23086598 + Fam166a protein_coding processed_transcript MGP_129S1SvImJ_T0013593.1 MGP_129S1SvImJ_G0011682.1 mouse_genomes_project 2 67649447 67649530 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058156.1 MGP_129S1SvImJ_G0026618.1 mouse_genomes_project 2 153192848 153196440 + MGP_129S1SvImJ_P0058156 Cst9 protein_coding protein_coding MGP_129S1SvImJ_T0056042.1 MGP_129S1SvImJ_G0026141.1 mouse_genomes_project 2 92389097 92420969 + MGP_129S1SvImJ_P0056042 Spi1 protein_coding protein_coding MGP_129S1SvImJ_T0056043.1 MGP_129S1SvImJ_G0026141.1 mouse_genomes_project 2 92389115 92396996 + Spi1 protein_coding processed_transcript MGP_129S1SvImJ_T0056044.1 MGP_129S1SvImJ_G0026141.1 mouse_genomes_project 2 92402781 92422359 + MGP_129S1SvImJ_P0056044 Spi1 protein_coding protein_coding MGP_129S1SvImJ_T0056045.1 MGP_129S1SvImJ_G0026141.1 mouse_genomes_project 2 92403465 92419918 + MGP_129S1SvImJ_P0056045 Spi1 protein_coding protein_coding MGP_129S1SvImJ_T0055334.1 MGP_129S1SvImJ_G0025838.1 mouse_genomes_project 2 73704429 73808643 - MGP_129S1SvImJ_P0055334 Wipf1 protein_coding protein_coding MGP_129S1SvImJ_T0055335.1 MGP_129S1SvImJ_G0025838.1 mouse_genomes_project 2 73704858 73764737 - MGP_129S1SvImJ_P0055335 Wipf1 protein_coding protein_coding MGP_129S1SvImJ_T0055336.1 MGP_129S1SvImJ_G0025838.1 mouse_genomes_project 2 73706966 73731976 - MGP_129S1SvImJ_P0055336 Wipf1 protein_coding protein_coding MGP_129S1SvImJ_T0055337.1 MGP_129S1SvImJ_G0025838.1 mouse_genomes_project 2 73713951 73765443 - MGP_129S1SvImJ_P0055337 Wipf1 protein_coding protein_coding MGP_129S1SvImJ_T0055338.1 MGP_129S1SvImJ_G0025838.1 mouse_genomes_project 2 73720937 73730707 - MGP_129S1SvImJ_P0055338 Wipf1 protein_coding protein_coding MGP_129S1SvImJ_T0055339.1 MGP_129S1SvImJ_G0025838.1 mouse_genomes_project 2 73720997 73808388 - Wipf1 protein_coding processed_transcript MGP_129S1SvImJ_T0055340.1 MGP_129S1SvImJ_G0025838.1 mouse_genomes_project 2 73725994 73808291 - Wipf1 protein_coding processed_transcript MGP_129S1SvImJ_T0004030.1 MGP_129S1SvImJ_G0003588.1 mouse_genomes_project 2 73696730 73703962 + Gm13707 antisense antisense MGP_129S1SvImJ_T0058196.1 MGP_129S1SvImJ_G0026632.1 mouse_genomes_project 2 155276944 155287047 - Abhd12 protein_coding processed_transcript MGP_129S1SvImJ_T0058197.1 MGP_129S1SvImJ_G0026632.1 mouse_genomes_project 2 155276944 155350327 - MGP_129S1SvImJ_P0058197 Abhd12 protein_coding protein_coding MGP_129S1SvImJ_T0058198.1 MGP_129S1SvImJ_G0026632.1 mouse_genomes_project 2 155276968 155350317 - MGP_129S1SvImJ_P0058198 Abhd12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058199.1 MGP_129S1SvImJ_G0026632.1 mouse_genomes_project 2 155277567 155284192 - MGP_129S1SvImJ_P0058199 Abhd12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058200.1 MGP_129S1SvImJ_G0026632.1 mouse_genomes_project 2 155281810 155350248 - Abhd12 protein_coding processed_transcript MGP_129S1SvImJ_T0058201.1 MGP_129S1SvImJ_G0026632.1 mouse_genomes_project 2 155287514 155296899 - Abhd12 protein_coding retained_intron MGP_129S1SvImJ_T0058202.1 MGP_129S1SvImJ_G0026632.1 mouse_genomes_project 2 155290802 155350233 - MGP_129S1SvImJ_P0058202 Abhd12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055927.1 MGP_129S1SvImJ_G0026110.1 mouse_genomes_project 2 90984095 90988860 - MGP_129S1SvImJ_P0055927 Olfr1254 protein_coding protein_coding MGP_129S1SvImJ_T0055928.1 MGP_129S1SvImJ_G0026110.1 mouse_genomes_project 2 90984095 90985040 - MGP_129S1SvImJ_P0055928 Olfr1254 protein_coding protein_coding MGP_129S1SvImJ_T0058486.1 MGP_129S1SvImJ_G0026717.1 mouse_genomes_project 2 159302515 159305277 + 1700003F12Rik protein_coding retained_intron MGP_129S1SvImJ_T0058488.1 MGP_129S1SvImJ_G0026717.1 mouse_genomes_project 2 159304346 159305462 + MGP_129S1SvImJ_P0058488 1700003F12Rik protein_coding protein_coding MGP_129S1SvImJ_T0058489.1 MGP_129S1SvImJ_G0026717.1 mouse_genomes_project 2 159304385 159305462 + MGP_129S1SvImJ_P0058489 1700003F12Rik protein_coding protein_coding MGP_129S1SvImJ_T0059791.1 MGP_129S1SvImJ_G0027010.1 mouse_genomes_project 2 187649032 187708572 - MGP_129S1SvImJ_P0059791 Kcnq2 protein_coding protein_coding MGP_129S1SvImJ_T0059792.1 MGP_129S1SvImJ_G0027010.1 mouse_genomes_project 2 187649033 187708694 - MGP_129S1SvImJ_P0059792 Kcnq2 protein_coding protein_coding MGP_129S1SvImJ_T0059793.1 MGP_129S1SvImJ_G0027010.1 mouse_genomes_project 2 187649033 187708780 - MGP_129S1SvImJ_P0059793 Kcnq2 protein_coding protein_coding MGP_129S1SvImJ_T0059794.1 MGP_129S1SvImJ_G0027010.1 mouse_genomes_project 2 187649040 187708607 - MGP_129S1SvImJ_P0059794 Kcnq2 protein_coding protein_coding MGP_129S1SvImJ_T0059795.1 MGP_129S1SvImJ_G0027010.1 mouse_genomes_project 2 187649042 187708657 - MGP_129S1SvImJ_P0059795 Kcnq2 protein_coding protein_coding MGP_129S1SvImJ_T0059796.1 MGP_129S1SvImJ_G0027010.1 mouse_genomes_project 2 187649042 187708657 - MGP_129S1SvImJ_P0059796 Kcnq2 protein_coding protein_coding MGP_129S1SvImJ_T0059797.1 MGP_129S1SvImJ_G0027010.1 mouse_genomes_project 2 187649042 187708657 - MGP_129S1SvImJ_P0059797 Kcnq2 protein_coding protein_coding MGP_129S1SvImJ_T0059798.1 MGP_129S1SvImJ_G0027010.1 mouse_genomes_project 2 187649042 187708657 - MGP_129S1SvImJ_P0059798 Kcnq2 protein_coding protein_coding MGP_129S1SvImJ_T0059799.1 MGP_129S1SvImJ_G0027010.1 mouse_genomes_project 2 187653953 187688175 - MGP_129S1SvImJ_P0059799 Kcnq2 protein_coding protein_coding MGP_129S1SvImJ_T0059800.1 MGP_129S1SvImJ_G0027010.1 mouse_genomes_project 2 187654353 187708611 - MGP_129S1SvImJ_P0059800 Kcnq2 protein_coding protein_coding MGP_129S1SvImJ_T0059801.1 MGP_129S1SvImJ_G0027010.1 mouse_genomes_project 2 187655857 187683210 - MGP_129S1SvImJ_P0059801 Kcnq2 protein_coding protein_coding MGP_129S1SvImJ_T0059802.1 MGP_129S1SvImJ_G0027010.1 mouse_genomes_project 2 187655907 187668876 - Kcnq2 protein_coding processed_transcript MGP_129S1SvImJ_T0059803.1 MGP_129S1SvImJ_G0027010.1 mouse_genomes_project 2 187658036 187674253 - Kcnq2 protein_coding retained_intron MGP_129S1SvImJ_T0059804.1 MGP_129S1SvImJ_G0027010.1 mouse_genomes_project 2 187659432 187708657 - Kcnq2 protein_coding retained_intron MGP_129S1SvImJ_T0059805.1 MGP_129S1SvImJ_G0027010.1 mouse_genomes_project 2 187669695 187708657 - Kcnq2 protein_coding retained_intron MGP_129S1SvImJ_T0059806.1 MGP_129S1SvImJ_G0027010.1 mouse_genomes_project 2 187669920 187708657 - Kcnq2 protein_coding retained_intron MGP_129S1SvImJ_T0059807.1 MGP_129S1SvImJ_G0027010.1 mouse_genomes_project 2 187681897 187708657 - Kcnq2 protein_coding processed_transcript MGP_129S1SvImJ_T0059808.1 MGP_129S1SvImJ_G0027010.1 mouse_genomes_project 2 187681897 187708723 - Kcnq2 protein_coding retained_intron MGP_129S1SvImJ_T0059809.1 MGP_129S1SvImJ_G0027010.1 mouse_genomes_project 2 187681897 187708657 - Kcnq2 protein_coding retained_intron MGP_129S1SvImJ_T0059810.1 MGP_129S1SvImJ_G0027010.1 mouse_genomes_project 2 187681897 187708657 - Kcnq2 protein_coding retained_intron MGP_129S1SvImJ_T0053145.1 MGP_129S1SvImJ_G0025445.1 mouse_genomes_project 2 23311767 23313684 + MGP_129S1SvImJ_P0053145 Fut7 protein_coding protein_coding MGP_129S1SvImJ_T0053146.1 MGP_129S1SvImJ_G0025445.1 mouse_genomes_project 2 23311879 23314872 + MGP_129S1SvImJ_P0053146 Fut7 protein_coding protein_coding MGP_129S1SvImJ_T0053147.1 MGP_129S1SvImJ_G0025445.1 mouse_genomes_project 2 23312053 23314875 + MGP_129S1SvImJ_P0053147 Fut7 protein_coding protein_coding MGP_129S1SvImJ_T0053148.1 MGP_129S1SvImJ_G0025445.1 mouse_genomes_project 2 23312194 23314875 + MGP_129S1SvImJ_P0053148 Fut7 protein_coding protein_coding MGP_129S1SvImJ_T0053149.1 MGP_129S1SvImJ_G0025445.1 mouse_genomes_project 2 23313148 23313592 + Fut7 protein_coding processed_transcript MGP_129S1SvImJ_T0004150.1 MGP_129S1SvImJ_G0003671.1 mouse_genomes_project 2 159393131 159395772 - Gm14198 antisense antisense MGP_129S1SvImJ_T0056344.1 MGP_129S1SvImJ_G0026187.1 mouse_genomes_project 2 97933195 99299983 + MGP_129S1SvImJ_P0056344 Lrrc4c protein_coding protein_coding MGP_129S1SvImJ_T0056345.1 MGP_129S1SvImJ_G0026187.1 mouse_genomes_project 2 97933242 99299300 + MGP_129S1SvImJ_P0056345 Lrrc4c protein_coding protein_coding MGP_129S1SvImJ_T0056346.1 MGP_129S1SvImJ_G0026187.1 mouse_genomes_project 2 99115570 99299981 + MGP_129S1SvImJ_P0056346 Lrrc4c protein_coding protein_coding MGP_129S1SvImJ_T0056347.1 MGP_129S1SvImJ_G0026187.1 mouse_genomes_project 2 99116002 99297380 + MGP_129S1SvImJ_P0056347 Lrrc4c protein_coding protein_coding MGP_129S1SvImJ_T0056421.1 MGP_129S1SvImJ_G0026203.1 mouse_genomes_project 2 105393411 105433871 + MGP_129S1SvImJ_P0056421 Elf5 protein_coding protein_coding MGP_129S1SvImJ_T0056422.1 MGP_129S1SvImJ_G0026203.1 mouse_genomes_project 2 105393436 105427568 + Elf5 protein_coding retained_intron MGP_129S1SvImJ_T0056423.1 MGP_129S1SvImJ_G0026203.1 mouse_genomes_project 2 105405783 105433874 + MGP_129S1SvImJ_P0056423 Elf5 protein_coding protein_coding MGP_129S1SvImJ_T0056424.1 MGP_129S1SvImJ_G0026203.1 mouse_genomes_project 2 105405847 105432732 + MGP_129S1SvImJ_P0056424 Elf5 protein_coding protein_coding MGP_129S1SvImJ_T0056425.1 MGP_129S1SvImJ_G0026203.1 mouse_genomes_project 2 105406548 105431922 + MGP_129S1SvImJ_P0056425 Elf5 protein_coding protein_coding MGP_129S1SvImJ_T0056426.1 MGP_129S1SvImJ_G0026203.1 mouse_genomes_project 2 105429157 105431906 + Elf5 protein_coding processed_transcript MGP_129S1SvImJ_T0056427.1 MGP_129S1SvImJ_G0026203.1 mouse_genomes_project 2 105431628 105432714 + Elf5 protein_coding processed_transcript MGP_129S1SvImJ_T0055853.1 MGP_129S1SvImJ_G0026048.1 mouse_genomes_project 2 89433278 89434226 + MGP_129S1SvImJ_P0055853 Olfr1176 protein_coding protein_coding MGP_129S1SvImJ_T0101889.1 MGP_129S1SvImJ_G0039814.1 mouse_genomes_project 2 89757106 89790096 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0055824.1 MGP_129S1SvImJ_G0026021.1 mouse_genomes_project 2 88767375 88768308 - MGP_129S1SvImJ_P0055824 Olfr1136 protein_coding protein_coding MGP_129S1SvImJ_T0100969.1 MGP_129S1SvImJ_G0039036.1 mouse_genomes_project 2 133724244 133724312 + Snord110 snoRNA snoRNA MGP_129S1SvImJ_T0053539.1 MGP_129S1SvImJ_G0025521.1 mouse_genomes_project 2 26521546 26525391 - 1700007K13Rik protein_coding processed_transcript MGP_129S1SvImJ_T0053540.1 MGP_129S1SvImJ_G0025521.1 mouse_genomes_project 2 26521546 26525913 - MGP_129S1SvImJ_P0053540 1700007K13Rik protein_coding protein_coding MGP_129S1SvImJ_T0053541.1 MGP_129S1SvImJ_G0025521.1 mouse_genomes_project 2 26521893 26525897 - MGP_129S1SvImJ_P0053541 1700007K13Rik protein_coding protein_coding MGP_129S1SvImJ_T0056296.1 MGP_129S1SvImJ_G0026179.1 mouse_genomes_project 2 95347952 95364388 - MGP_129S1SvImJ_P0056296 Accs protein_coding protein_coding MGP_129S1SvImJ_T0056297.1 MGP_129S1SvImJ_G0026179.1 mouse_genomes_project 2 95349920 95364126 - MGP_129S1SvImJ_P0056297 Accs protein_coding protein_coding MGP_129S1SvImJ_T0056298.1 MGP_129S1SvImJ_G0026179.1 mouse_genomes_project 2 95349920 95364246 - MGP_129S1SvImJ_P0056298 Accs protein_coding protein_coding MGP_129S1SvImJ_T0056299.1 MGP_129S1SvImJ_G0026179.1 mouse_genomes_project 2 95350470 95353853 - Accs protein_coding retained_intron MGP_129S1SvImJ_T0056300.1 MGP_129S1SvImJ_G0026179.1 mouse_genomes_project 2 95351501 95364390 - Accs protein_coding retained_intron MGP_129S1SvImJ_T0056301.1 MGP_129S1SvImJ_G0026179.1 mouse_genomes_project 2 95352493 95362372 - MGP_129S1SvImJ_P0056301 Accs protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056302.1 MGP_129S1SvImJ_G0026179.1 mouse_genomes_project 2 95353686 95356762 - Accs protein_coding retained_intron MGP_129S1SvImJ_T0056303.1 MGP_129S1SvImJ_G0026179.1 mouse_genomes_project 2 95355773 95356875 - Accs protein_coding retained_intron MGP_129S1SvImJ_T0056304.1 MGP_129S1SvImJ_G0026179.1 mouse_genomes_project 2 95357062 95364263 - MGP_129S1SvImJ_P0056304 Accs protein_coding protein_coding MGP_129S1SvImJ_T0056305.1 MGP_129S1SvImJ_G0026179.1 mouse_genomes_project 2 95357291 95364386 - Accs protein_coding retained_intron MGP_129S1SvImJ_T0056306.1 MGP_129S1SvImJ_G0026179.1 mouse_genomes_project 2 95357302 95364386 - Accs protein_coding retained_intron MGP_129S1SvImJ_T0056307.1 MGP_129S1SvImJ_G0026179.1 mouse_genomes_project 2 95359514 95360227 - Accs protein_coding processed_transcript MGP_129S1SvImJ_T0003983.1 MGP_129S1SvImJ_G0003555.1 mouse_genomes_project 2 37093917 37094877 - Gm27197 antisense antisense MGP_129S1SvImJ_T0003931.1 MGP_129S1SvImJ_G0003515.1 mouse_genomes_project 2 18169535 18176202 - antisense antisense MGP_129S1SvImJ_T0053658.1 MGP_129S1SvImJ_G0025543.1 mouse_genomes_project 2 27959348 27969680 + MGP_129S1SvImJ_P0053658 Coq4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053659.1 MGP_129S1SvImJ_G0025543.1 mouse_genomes_project 2 27960075 27968347 + MGP_129S1SvImJ_P0053659 Coq4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053660.1 MGP_129S1SvImJ_G0025543.1 mouse_genomes_project 2 27960114 27969488 + MGP_129S1SvImJ_P0053660 Coq4 protein_coding protein_coding MGP_129S1SvImJ_T0053661.1 MGP_129S1SvImJ_G0025543.1 mouse_genomes_project 2 27960126 27967747 + MGP_129S1SvImJ_P0053661 Coq4 protein_coding protein_coding MGP_129S1SvImJ_T0053662.1 MGP_129S1SvImJ_G0025543.1 mouse_genomes_project 2 27961832 27962504 + Coq4 protein_coding retained_intron MGP_129S1SvImJ_T0053663.1 MGP_129S1SvImJ_G0025543.1 mouse_genomes_project 2 27967309 27968731 + Coq4 protein_coding retained_intron MGP_129S1SvImJ_T0007171.1 MGP_129S1SvImJ_G0005884.1 mouse_genomes_project 2 26105597 26107080 - Gm13371 lincRNA lincRNA MGP_129S1SvImJ_T0055937.1 MGP_129S1SvImJ_G0026116.1 mouse_genomes_project 2 91173241 91177128 + MGP_129S1SvImJ_P0055937 Olfr1260 protein_coding protein_coding MGP_129S1SvImJ_T0055938.1 MGP_129S1SvImJ_G0026116.1 mouse_genomes_project 2 91173248 91176608 + Olfr1260 protein_coding processed_transcript MGP_129S1SvImJ_T0055939.1 MGP_129S1SvImJ_G0026116.1 mouse_genomes_project 2 91173251 91176558 + MGP_129S1SvImJ_P0055939 Olfr1260 protein_coding protein_coding MGP_129S1SvImJ_T0055940.1 MGP_129S1SvImJ_G0026116.1 mouse_genomes_project 2 91173257 91176615 + Olfr1260 protein_coding processed_transcript MGP_129S1SvImJ_T0055941.1 MGP_129S1SvImJ_G0026116.1 mouse_genomes_project 2 91176195 91177128 + MGP_129S1SvImJ_P0055941 Olfr1260 protein_coding protein_coding MGP_129S1SvImJ_T0099653.1 MGP_129S1SvImJ_G0037720.1 mouse_genomes_project 2 1419364 1419471 - Gm23691 snRNA snRNA MGP_129S1SvImJ_T0055870.1 MGP_129S1SvImJ_G0026064.1 mouse_genomes_project 2 89901519 89902446 - MGP_129S1SvImJ_P0055870 Olfr1198 protein_coding protein_coding MGP_129S1SvImJ_T0017829.1 MGP_129S1SvImJ_G0015437.1 mouse_genomes_project 2 89090831 89093768 - processed_transcript processed_transcript MGP_129S1SvImJ_T0055849.1 MGP_129S1SvImJ_G0026044.1 mouse_genomes_project 2 89150868 89151849 - MGP_129S1SvImJ_P0055849 Olfr1164 protein_coding protein_coding MGP_129S1SvImJ_T0056564.1 MGP_129S1SvImJ_G0026231.1 mouse_genomes_project 2 107876538 108089160 - MGP_129S1SvImJ_P0056564 Elp4 protein_coding protein_coding MGP_129S1SvImJ_T0056565.1 MGP_129S1SvImJ_G0026231.1 mouse_genomes_project 2 107907208 108047047 - MGP_129S1SvImJ_P0056565 Elp4 protein_coding protein_coding MGP_129S1SvImJ_T0056566.1 MGP_129S1SvImJ_G0026231.1 mouse_genomes_project 2 107971629 107995690 - Elp4 protein_coding retained_intron MGP_129S1SvImJ_T0056567.1 MGP_129S1SvImJ_G0026231.1 mouse_genomes_project 2 108047134 108089079 - Elp4 protein_coding processed_transcript MGP_129S1SvImJ_T0004191.1 MGP_129S1SvImJ_G0003703.1 mouse_genomes_project 2 176398985 176426429 + Bcas1os2 antisense antisense MGP_129S1SvImJ_T0056990.1 MGP_129S1SvImJ_G0026361.1 mouse_genomes_project 2 123028318 123055224 - Pla2g4e protein_coding retained_intron MGP_129S1SvImJ_T0056991.1 MGP_129S1SvImJ_G0026361.1 mouse_genomes_project 2 123028318 123106786 - MGP_129S1SvImJ_P0056991 Pla2g4e protein_coding protein_coding MGP_129S1SvImJ_T0056992.1 MGP_129S1SvImJ_G0026361.1 mouse_genomes_project 2 123034098 123106539 - Pla2g4e protein_coding retained_intron MGP_129S1SvImJ_T0056993.1 MGP_129S1SvImJ_G0026361.1 mouse_genomes_project 2 123053428 123106565 - Pla2g4e protein_coding processed_transcript MGP_129S1SvImJ_T0054767.1 MGP_129S1SvImJ_G0025733.1 mouse_genomes_project 2 51451211 51662740 - MGP_129S1SvImJ_P0054767 Neb protein_coding protein_coding MGP_129S1SvImJ_T0054768.1 MGP_129S1SvImJ_G0025733.1 mouse_genomes_project 2 51451226 51541788 - MGP_129S1SvImJ_P0054768 Neb protein_coding protein_coding MGP_129S1SvImJ_T0054769.1 MGP_129S1SvImJ_G0025733.1 mouse_genomes_project 2 51451226 51659076 - MGP_129S1SvImJ_P0054769 Neb protein_coding protein_coding MGP_129S1SvImJ_T0054770.1 MGP_129S1SvImJ_G0025733.1 mouse_genomes_project 2 51451680 51475133 - Neb protein_coding processed_transcript MGP_129S1SvImJ_T0054771.1 MGP_129S1SvImJ_G0025733.1 mouse_genomes_project 2 51451821 51658423 - MGP_129S1SvImJ_P0054771 Neb protein_coding unknown_likely_coding MGP_129S1SvImJ_T0054772.1 MGP_129S1SvImJ_G0025733.1 mouse_genomes_project 2 51451824 51493541 - MGP_129S1SvImJ_P0054772 Neb protein_coding protein_coding MGP_129S1SvImJ_T0054773.1 MGP_129S1SvImJ_G0025733.1 mouse_genomes_project 2 51473558 51480197 - Neb protein_coding processed_transcript MGP_129S1SvImJ_T0054774.1 MGP_129S1SvImJ_G0025733.1 mouse_genomes_project 2 51490703 51493109 - Neb protein_coding processed_transcript MGP_129S1SvImJ_T0054775.1 MGP_129S1SvImJ_G0025733.1 mouse_genomes_project 2 51494972 51510524 - MGP_129S1SvImJ_P0054775 Neb protein_coding protein_coding MGP_129S1SvImJ_T0054776.1 MGP_129S1SvImJ_G0025733.1 mouse_genomes_project 2 51539833 51575410 - MGP_129S1SvImJ_P0054776 Neb protein_coding protein_coding MGP_129S1SvImJ_T0054777.1 MGP_129S1SvImJ_G0025733.1 mouse_genomes_project 2 51642444 51659704 - Neb protein_coding processed_transcript MGP_129S1SvImJ_T0054778.1 MGP_129S1SvImJ_G0025733.1 mouse_genomes_project 2 51652772 51662740 - Neb protein_coding processed_transcript MGP_129S1SvImJ_T0013643.1 MGP_129S1SvImJ_G0011732.1 mouse_genomes_project 2 84113262 84113472 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098571.1 MGP_129S1SvImJ_G0036656.1 mouse_genomes_project 2 149464176 149464270 + Gm22731 rRNA rRNA MGP_129S1SvImJ_T0056650.1 MGP_129S1SvImJ_G0026265.1 mouse_genomes_project 2 113934293 113943156 - MGP_129S1SvImJ_P0056650 protein_coding protein_coding MGP_129S1SvImJ_T0013508.1 MGP_129S1SvImJ_G0011597.1 mouse_genomes_project 2 36383861 36384657 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056166.1 MGP_129S1SvImJ_G0026157.1 mouse_genomes_project 2 93094123 93302691 + MGP_129S1SvImJ_P0056166 Ambra1 protein_coding protein_coding MGP_129S1SvImJ_T0056167.1 MGP_129S1SvImJ_G0026157.1 mouse_genomes_project 2 93094127 93302690 + MGP_129S1SvImJ_P0056167 Ambra1 protein_coding protein_coding MGP_129S1SvImJ_T0056168.1 MGP_129S1SvImJ_G0026157.1 mouse_genomes_project 2 93094171 93185457 + Ambra1 protein_coding processed_transcript MGP_129S1SvImJ_T0056169.1 MGP_129S1SvImJ_G0026157.1 mouse_genomes_project 2 93094171 93185457 + Ambra1 protein_coding processed_transcript MGP_129S1SvImJ_T0056170.1 MGP_129S1SvImJ_G0026157.1 mouse_genomes_project 2 93094173 93302690 + MGP_129S1SvImJ_P0056170 Ambra1 protein_coding protein_coding MGP_129S1SvImJ_T0056171.1 MGP_129S1SvImJ_G0026157.1 mouse_genomes_project 2 93094214 93302691 + MGP_129S1SvImJ_P0056171 Ambra1 protein_coding protein_coding MGP_129S1SvImJ_T0056172.1 MGP_129S1SvImJ_G0026157.1 mouse_genomes_project 2 93136042 93302691 + MGP_129S1SvImJ_P0056172 Ambra1 protein_coding protein_coding MGP_129S1SvImJ_T0056173.1 MGP_129S1SvImJ_G0026157.1 mouse_genomes_project 2 93142809 93201749 + Ambra1 protein_coding processed_transcript MGP_129S1SvImJ_T0056174.1 MGP_129S1SvImJ_G0026157.1 mouse_genomes_project 2 93186155 93202582 + Ambra1 protein_coding processed_transcript MGP_129S1SvImJ_T0059116.1 MGP_129S1SvImJ_G0026846.1 mouse_genomes_project 2 169736001 169737704 + MGP_129S1SvImJ_P0059116 Svs6 protein_coding protein_coding MGP_129S1SvImJ_T0053280.1 MGP_129S1SvImJ_G0025476.1 mouse_genomes_project 2 23937163 23946391 - Ubac1 protein_coding processed_transcript MGP_129S1SvImJ_T0053281.1 MGP_129S1SvImJ_G0025476.1 mouse_genomes_project 2 23937163 23960216 - MGP_129S1SvImJ_P0053281 Ubac1 protein_coding protein_coding MGP_129S1SvImJ_T0053282.1 MGP_129S1SvImJ_G0025476.1 mouse_genomes_project 2 23937426 23947694 - Ubac1 protein_coding processed_transcript MGP_129S1SvImJ_T0053283.1 MGP_129S1SvImJ_G0025476.1 mouse_genomes_project 2 23943874 23954781 - MGP_129S1SvImJ_P0053283 Ubac1 protein_coding protein_coding MGP_129S1SvImJ_T0053284.1 MGP_129S1SvImJ_G0025476.1 mouse_genomes_project 2 23944997 23960001 - MGP_129S1SvImJ_P0053284 Ubac1 protein_coding protein_coding MGP_129S1SvImJ_T0053285.1 MGP_129S1SvImJ_G0025476.1 mouse_genomes_project 2 23947365 23949424 - Ubac1 protein_coding processed_transcript MGP_129S1SvImJ_T0053286.1 MGP_129S1SvImJ_G0025476.1 mouse_genomes_project 2 23949005 23955947 - Ubac1 protein_coding processed_transcript MGP_129S1SvImJ_T0053287.1 MGP_129S1SvImJ_G0025476.1 mouse_genomes_project 2 23953382 23960035 - Ubac1 protein_coding processed_transcript MGP_129S1SvImJ_T0053288.1 MGP_129S1SvImJ_G0025476.1 mouse_genomes_project 2 23954433 23960071 - Ubac1 protein_coding processed_transcript MGP_129S1SvImJ_T0017904.1 MGP_129S1SvImJ_G0015470.1 mouse_genomes_project 2 132678238 132690117 + Gm14023 processed_transcript processed_transcript MGP_129S1SvImJ_T0059264.1 MGP_129S1SvImJ_G0026889.1 mouse_genomes_project 2 170826067 170827357 - Slc35c2 protein_coding retained_intron MGP_129S1SvImJ_T0059265.1 MGP_129S1SvImJ_G0026889.1 mouse_genomes_project 2 170826067 170838404 - MGP_129S1SvImJ_P0059265 Slc35c2 protein_coding protein_coding MGP_129S1SvImJ_T0059266.1 MGP_129S1SvImJ_G0026889.1 mouse_genomes_project 2 170826067 170838476 - MGP_129S1SvImJ_P0059266 Slc35c2 protein_coding protein_coding MGP_129S1SvImJ_T0059267.1 MGP_129S1SvImJ_G0026889.1 mouse_genomes_project 2 170826067 170838404 - MGP_129S1SvImJ_P0059267 Slc35c2 protein_coding protein_coding MGP_129S1SvImJ_T0059268.1 MGP_129S1SvImJ_G0026889.1 mouse_genomes_project 2 170826067 170838518 - MGP_129S1SvImJ_P0059268 Slc35c2 protein_coding protein_coding MGP_129S1SvImJ_T0059269.1 MGP_129S1SvImJ_G0026889.1 mouse_genomes_project 2 170826067 170838473 - MGP_129S1SvImJ_P0059269 Slc35c2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059270.1 MGP_129S1SvImJ_G0026889.1 mouse_genomes_project 2 170826967 170832873 - Slc35c2 protein_coding retained_intron MGP_129S1SvImJ_T0059271.1 MGP_129S1SvImJ_G0026889.1 mouse_genomes_project 2 170827869 170834018 - MGP_129S1SvImJ_P0059271 Slc35c2 protein_coding protein_coding MGP_129S1SvImJ_T0059272.1 MGP_129S1SvImJ_G0026889.1 mouse_genomes_project 2 170827905 170834250 - MGP_129S1SvImJ_P0059272 Slc35c2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059273.1 MGP_129S1SvImJ_G0026889.1 mouse_genomes_project 2 170830128 170834250 - MGP_129S1SvImJ_P0059273 Slc35c2 protein_coding protein_coding MGP_129S1SvImJ_T0059274.1 MGP_129S1SvImJ_G0026889.1 mouse_genomes_project 2 170830297 170838484 - MGP_129S1SvImJ_P0059274 Slc35c2 protein_coding protein_coding MGP_129S1SvImJ_T0059275.1 MGP_129S1SvImJ_G0026889.1 mouse_genomes_project 2 170830297 170838485 - MGP_129S1SvImJ_P0059275 Slc35c2 protein_coding protein_coding MGP_129S1SvImJ_T0059276.1 MGP_129S1SvImJ_G0026889.1 mouse_genomes_project 2 170830385 170837201 - MGP_129S1SvImJ_P0059276 Slc35c2 protein_coding protein_coding MGP_129S1SvImJ_T0059277.1 MGP_129S1SvImJ_G0026889.1 mouse_genomes_project 2 170830390 170838476 - MGP_129S1SvImJ_P0059277 Slc35c2 protein_coding protein_coding MGP_129S1SvImJ_T0059278.1 MGP_129S1SvImJ_G0026889.1 mouse_genomes_project 2 170831060 170838487 - Slc35c2 protein_coding retained_intron MGP_129S1SvImJ_T0059279.1 MGP_129S1SvImJ_G0026889.1 mouse_genomes_project 2 170833528 170838421 - MGP_129S1SvImJ_P0059279 Slc35c2 protein_coding protein_coding MGP_129S1SvImJ_T0052784.1 MGP_129S1SvImJ_G0025382.1 mouse_genomes_project 2 17187066 17188905 + MGP_129S1SvImJ_P0052784 Ptf1a protein_coding protein_coding MGP_129S1SvImJ_T0054237.1 MGP_129S1SvImJ_G0025627.1 mouse_genomes_project 2 31427628 31463409 - MGP_129S1SvImJ_P0054237 Lrsam1 protein_coding protein_coding MGP_129S1SvImJ_T0054238.1 MGP_129S1SvImJ_G0025627.1 mouse_genomes_project 2 31427632 31463768 - MGP_129S1SvImJ_P0054238 Lrsam1 protein_coding protein_coding MGP_129S1SvImJ_T0054239.1 MGP_129S1SvImJ_G0025627.1 mouse_genomes_project 2 31431818 31444057 - MGP_129S1SvImJ_P0054239 Lrsam1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054240.1 MGP_129S1SvImJ_G0025627.1 mouse_genomes_project 2 31438072 31441027 - Lrsam1 protein_coding retained_intron MGP_129S1SvImJ_T0054241.1 MGP_129S1SvImJ_G0025627.1 mouse_genomes_project 2 31456374 31463753 - MGP_129S1SvImJ_P0054241 Lrsam1 protein_coding protein_coding MGP_129S1SvImJ_T0054242.1 MGP_129S1SvImJ_G0025627.1 mouse_genomes_project 2 31456376 31463746 - MGP_129S1SvImJ_P0054242 Lrsam1 protein_coding protein_coding MGP_129S1SvImJ_T0054243.1 MGP_129S1SvImJ_G0025627.1 mouse_genomes_project 2 31456389 31462060 - MGP_129S1SvImJ_P0054243 Lrsam1 protein_coding protein_coding MGP_129S1SvImJ_T0054244.1 MGP_129S1SvImJ_G0025627.1 mouse_genomes_project 2 31456393 31463405 - MGP_129S1SvImJ_P0054244 Lrsam1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054245.1 MGP_129S1SvImJ_G0025627.1 mouse_genomes_project 2 31459402 31463747 - MGP_129S1SvImJ_P0054245 Lrsam1 protein_coding protein_coding MGP_129S1SvImJ_T0054246.1 MGP_129S1SvImJ_G0025627.1 mouse_genomes_project 2 31459409 31463747 - MGP_129S1SvImJ_P0054246 Lrsam1 protein_coding protein_coding MGP_129S1SvImJ_T0054247.1 MGP_129S1SvImJ_G0025627.1 mouse_genomes_project 2 31462400 31463754 - Lrsam1 protein_coding processed_transcript MGP_129S1SvImJ_T0054248.1 MGP_129S1SvImJ_G0025627.1 mouse_genomes_project 2 31463227 31463760 - Lrsam1 protein_coding processed_transcript MGP_129S1SvImJ_T0004133.1 MGP_129S1SvImJ_G0003655.1 mouse_genomes_project 2 148308947 148312244 + antisense antisense MGP_129S1SvImJ_T0055903.1 MGP_129S1SvImJ_G0026093.1 mouse_genomes_project 2 90517682 90518600 - MGP_129S1SvImJ_P0055903 Olfr1233 protein_coding protein_coding MGP_129S1SvImJ_T0007328.1 MGP_129S1SvImJ_G0006010.1 mouse_genomes_project 2 128457385 128458677 - Gm14003 lincRNA lincRNA MGP_129S1SvImJ_T0054209.1 MGP_129S1SvImJ_G0025622.1 mouse_genomes_project 2 31249162 31255699 + MGP_129S1SvImJ_P0054209 Tor2a protein_coding protein_coding MGP_129S1SvImJ_T0054210.1 MGP_129S1SvImJ_G0025622.1 mouse_genomes_project 2 31249173 31255394 + MGP_129S1SvImJ_P0054210 Tor2a protein_coding protein_coding MGP_129S1SvImJ_T0054211.1 MGP_129S1SvImJ_G0025622.1 mouse_genomes_project 2 31249183 31255185 + MGP_129S1SvImJ_P0054211 Tor2a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054212.1 MGP_129S1SvImJ_G0025622.1 mouse_genomes_project 2 31249188 31255699 + MGP_129S1SvImJ_P0054212 Tor2a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054213.1 MGP_129S1SvImJ_G0025622.1 mouse_genomes_project 2 31249204 31255697 + Tor2a protein_coding retained_intron MGP_129S1SvImJ_T0054214.1 MGP_129S1SvImJ_G0025622.1 mouse_genomes_project 2 31249219 31249912 + Tor2a protein_coding processed_transcript MGP_129S1SvImJ_T0054215.1 MGP_129S1SvImJ_G0025622.1 mouse_genomes_project 2 31249247 31255049 + MGP_129S1SvImJ_P0054215 Tor2a protein_coding protein_coding MGP_129S1SvImJ_T0054216.1 MGP_129S1SvImJ_G0025622.1 mouse_genomes_project 2 31253951 31255244 + Tor2a protein_coding retained_intron MGP_129S1SvImJ_T0059057.1 MGP_129S1SvImJ_G0026823.1 mouse_genomes_project 2 168813618 168819869 - MGP_129S1SvImJ_P0059057 Fitm2 protein_coding protein_coding MGP_129S1SvImJ_T0054494.1 MGP_129S1SvImJ_G0025678.1 mouse_genomes_project 2 35549252 35550200 + MGP_129S1SvImJ_P0054494 Olfr352 protein_coding protein_coding MGP_129S1SvImJ_T0056579.1 MGP_129S1SvImJ_G0026235.1 mouse_genomes_project 2 109196466 109210357 - MGP_129S1SvImJ_P0056579 Arl14ep protein_coding protein_coding MGP_129S1SvImJ_T0056580.1 MGP_129S1SvImJ_G0026235.1 mouse_genomes_project 2 109198360 109204323 - MGP_129S1SvImJ_P0056580 Arl14ep protein_coding protein_coding MGP_129S1SvImJ_T0056581.1 MGP_129S1SvImJ_G0026235.1 mouse_genomes_project 2 109199122 109203209 - Arl14ep protein_coding retained_intron MGP_129S1SvImJ_T0056582.1 MGP_129S1SvImJ_G0026235.1 mouse_genomes_project 2 109201339 109210330 - Arl14ep protein_coding retained_intron MGP_129S1SvImJ_T0055831.1 MGP_129S1SvImJ_G0026027.1 mouse_genomes_project 2 88866090 88867035 + MGP_129S1SvImJ_P0055831 Olfr1143 protein_coding protein_coding MGP_129S1SvImJ_T0100974.1 MGP_129S1SvImJ_G0039041.1 mouse_genomes_project 2 146789451 146789567 + Gm22310 snoRNA snoRNA MGP_129S1SvImJ_T0055754.1 MGP_129S1SvImJ_G0025962.1 mouse_genomes_project 2 87073861 87074824 - MGP_129S1SvImJ_P0055754 Olfr1048 protein_coding protein_coding MGP_129S1SvImJ_T0013882.1 MGP_129S1SvImJ_G0011971.1 mouse_genomes_project 2 173009812 173010171 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058354.1 MGP_129S1SvImJ_G0026683.1 mouse_genomes_project 2 157565372 157615910 + MGP_129S1SvImJ_P0058354 Ttll9 protein_coding protein_coding MGP_129S1SvImJ_T0058355.1 MGP_129S1SvImJ_G0026683.1 mouse_genomes_project 2 157565393 157611762 + MGP_129S1SvImJ_P0058355 Ttll9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058356.1 MGP_129S1SvImJ_G0026683.1 mouse_genomes_project 2 157565393 157611813 + MGP_129S1SvImJ_P0058356 Ttll9 protein_coding protein_coding MGP_129S1SvImJ_T0058357.1 MGP_129S1SvImJ_G0026683.1 mouse_genomes_project 2 157565393 157611769 + MGP_129S1SvImJ_P0058357 Ttll9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058358.1 MGP_129S1SvImJ_G0026683.1 mouse_genomes_project 2 157565398 157615541 + MGP_129S1SvImJ_P0058358 Ttll9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058359.1 MGP_129S1SvImJ_G0026683.1 mouse_genomes_project 2 157578127 157615910 + MGP_129S1SvImJ_P0058359 Ttll9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058360.1 MGP_129S1SvImJ_G0026683.1 mouse_genomes_project 2 157579404 157590132 + MGP_129S1SvImJ_P0058360 Ttll9 protein_coding protein_coding MGP_129S1SvImJ_T0058361.1 MGP_129S1SvImJ_G0026683.1 mouse_genomes_project 2 157595267 157605871 + Ttll9 protein_coding retained_intron MGP_129S1SvImJ_T0058362.1 MGP_129S1SvImJ_G0026683.1 mouse_genomes_project 2 157611363 157617052 + Ttll9 protein_coding retained_intron MGP_129S1SvImJ_T0055030.1 MGP_129S1SvImJ_G0025778.1 mouse_genomes_project 2 65116986 65170065 - MGP_129S1SvImJ_P0055030 Slc38a11 protein_coding protein_coding MGP_129S1SvImJ_T0055031.1 MGP_129S1SvImJ_G0025778.1 mouse_genomes_project 2 65117041 65170521 - MGP_129S1SvImJ_P0055031 Slc38a11 protein_coding protein_coding MGP_129S1SvImJ_T0055032.1 MGP_129S1SvImJ_G0025778.1 mouse_genomes_project 2 65122899 65170636 - MGP_129S1SvImJ_P0055032 Slc38a11 protein_coding protein_coding MGP_129S1SvImJ_T0055033.1 MGP_129S1SvImJ_G0025778.1 mouse_genomes_project 2 65156044 65170636 - Slc38a11 protein_coding processed_transcript MGP_129S1SvImJ_T0055034.1 MGP_129S1SvImJ_G0025778.1 mouse_genomes_project 2 65156608 65170602 - MGP_129S1SvImJ_P0055034 Slc38a11 protein_coding protein_coding MGP_129S1SvImJ_T0055035.1 MGP_129S1SvImJ_G0025778.1 mouse_genomes_project 2 65159460 65170525 - Slc38a11 protein_coding processed_transcript MGP_129S1SvImJ_T0055036.1 MGP_129S1SvImJ_G0025778.1 mouse_genomes_project 2 65161408 65170632 - Slc38a11 protein_coding processed_transcript MGP_129S1SvImJ_T0013872.1 MGP_129S1SvImJ_G0011961.1 mouse_genomes_project 2 168269069 168270404 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099660.1 MGP_129S1SvImJ_G0037727.1 mouse_genomes_project 2 22881498 22881602 - Gm24875 snRNA snRNA MGP_129S1SvImJ_T0058302.1 MGP_129S1SvImJ_G0026658.1 mouse_genomes_project 2 156928942 156933395 - MGP_129S1SvImJ_P0058302 Sox12 protein_coding protein_coding MGP_129S1SvImJ_T0058303.1 MGP_129S1SvImJ_G0026658.1 mouse_genomes_project 2 156928945 156933378 - MGP_129S1SvImJ_P0058303 Sox12 protein_coding protein_coding MGP_129S1SvImJ_T0059159.1 MGP_129S1SvImJ_G0026860.1 mouse_genomes_project 2 170055794 170061048 - MGP_129S1SvImJ_P0059159 Eppin protein_coding protein_coding MGP_129S1SvImJ_T0001074.1 MGP_129S1SvImJ_G0001003.1 mouse_genomes_project 2 12484636 12486573 + TEC TEC MGP_129S1SvImJ_T0052855.1 MGP_129S1SvImJ_G0025394.1 mouse_genomes_project 2 20678219 20781318 - MGP_129S1SvImJ_P0052855 Abi1 protein_coding protein_coding MGP_129S1SvImJ_T0052856.1 MGP_129S1SvImJ_G0025394.1 mouse_genomes_project 2 20678219 20781272 - MGP_129S1SvImJ_P0052856 Abi1 protein_coding protein_coding MGP_129S1SvImJ_T0052857.1 MGP_129S1SvImJ_G0025394.1 mouse_genomes_project 2 20678232 20781318 - MGP_129S1SvImJ_P0052857 Abi1 protein_coding protein_coding MGP_129S1SvImJ_T0052858.1 MGP_129S1SvImJ_G0025394.1 mouse_genomes_project 2 20678454 20781199 - MGP_129S1SvImJ_P0052858 Abi1 protein_coding protein_coding MGP_129S1SvImJ_T0052859.1 MGP_129S1SvImJ_G0025394.1 mouse_genomes_project 2 20678510 20781264 - MGP_129S1SvImJ_P0052859 Abi1 protein_coding protein_coding MGP_129S1SvImJ_T0052860.1 MGP_129S1SvImJ_G0025394.1 mouse_genomes_project 2 20678510 20781181 - MGP_129S1SvImJ_P0052860 Abi1 protein_coding protein_coding MGP_129S1SvImJ_T0052861.1 MGP_129S1SvImJ_G0025394.1 mouse_genomes_project 2 20678510 20781214 - MGP_129S1SvImJ_P0052861 Abi1 protein_coding protein_coding MGP_129S1SvImJ_T0052862.1 MGP_129S1SvImJ_G0025394.1 mouse_genomes_project 2 20678515 20781307 - MGP_129S1SvImJ_P0052862 Abi1 protein_coding protein_coding MGP_129S1SvImJ_T0052863.1 MGP_129S1SvImJ_G0025394.1 mouse_genomes_project 2 20678515 20781262 - MGP_129S1SvImJ_P0052863 Abi1 protein_coding protein_coding MGP_129S1SvImJ_T0052864.1 MGP_129S1SvImJ_G0025394.1 mouse_genomes_project 2 20679038 20781217 - MGP_129S1SvImJ_P0052864 Abi1 protein_coding protein_coding MGP_129S1SvImJ_T0052865.1 MGP_129S1SvImJ_G0025394.1 mouse_genomes_project 2 20679379 20781296 - MGP_129S1SvImJ_P0052865 Abi1 protein_coding protein_coding MGP_129S1SvImJ_T0052866.1 MGP_129S1SvImJ_G0025394.1 mouse_genomes_project 2 20679954 20686096 - Abi1 protein_coding retained_intron MGP_129S1SvImJ_T0052867.1 MGP_129S1SvImJ_G0025394.1 mouse_genomes_project 2 20679958 20689152 - Abi1 protein_coding retained_intron MGP_129S1SvImJ_T0052868.1 MGP_129S1SvImJ_G0025394.1 mouse_genomes_project 2 20685568 20700629 - Abi1 protein_coding retained_intron MGP_129S1SvImJ_T0052869.1 MGP_129S1SvImJ_G0025394.1 mouse_genomes_project 2 20689075 20702388 - Abi1 protein_coding retained_intron MGP_129S1SvImJ_T0057239.1 MGP_129S1SvImJ_G0026398.1 mouse_genomes_project 2 124381213 124463344 + Wdr76 protein_coding retained_intron MGP_129S1SvImJ_T0057240.1 MGP_129S1SvImJ_G0026398.1 mouse_genomes_project 2 124427604 124472806 + MGP_129S1SvImJ_P0057240 Wdr76 protein_coding protein_coding MGP_129S1SvImJ_T0013414.1 MGP_129S1SvImJ_G0011503.1 mouse_genomes_project 2 16172 16688 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055762.1 MGP_129S1SvImJ_G0025970.1 mouse_genomes_project 2 87244825 87245776 - MGP_129S1SvImJ_P0055762 Olfr1058 protein_coding protein_coding MGP_129S1SvImJ_T0013433.1 MGP_129S1SvImJ_G0011522.1 mouse_genomes_project 2 8266013 8266824 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013506.1 MGP_129S1SvImJ_G0011595.1 mouse_genomes_project 2 36186605 36187375 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013878.1 MGP_129S1SvImJ_G0011967.1 mouse_genomes_project 2 172155655 172156151 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054486.1 MGP_129S1SvImJ_G0025671.1 mouse_genomes_project 2 35369374 35370304 + MGP_129S1SvImJ_P0054486 Olfr346 protein_coding protein_coding MGP_129S1SvImJ_T0055863.1 MGP_129S1SvImJ_G0026058.1 mouse_genomes_project 2 89652517 89652904 - MGP_129S1SvImJ_P0055863 Olfr1187-ps1 protein_coding protein_coding MGP_129S1SvImJ_T0055864.1 MGP_129S1SvImJ_G0026058.1 mouse_genomes_project 2 89652520 89652823 - MGP_129S1SvImJ_P0055864 Olfr1187-ps1 protein_coding protein_coding MGP_129S1SvImJ_T0056180.1 MGP_129S1SvImJ_G0026160.1 mouse_genomes_project 2 93316608 93364714 - MGP_129S1SvImJ_P0056180 Dgkz protein_coding protein_coding MGP_129S1SvImJ_T0056181.1 MGP_129S1SvImJ_G0026160.1 mouse_genomes_project 2 93316608 93352986 - MGP_129S1SvImJ_P0056181 Dgkz protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056182.1 MGP_129S1SvImJ_G0026160.1 mouse_genomes_project 2 93316610 93351068 - MGP_129S1SvImJ_P0056182 Dgkz protein_coding protein_coding MGP_129S1SvImJ_T0056183.1 MGP_129S1SvImJ_G0026160.1 mouse_genomes_project 2 93316611 93334212 - MGP_129S1SvImJ_P0056183 Dgkz protein_coding protein_coding MGP_129S1SvImJ_T0056184.1 MGP_129S1SvImJ_G0026160.1 mouse_genomes_project 2 93316611 93352999 - MGP_129S1SvImJ_P0056184 Dgkz protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056185.1 MGP_129S1SvImJ_G0026160.1 mouse_genomes_project 2 93317020 93317717 - Dgkz protein_coding retained_intron MGP_129S1SvImJ_T0056186.1 MGP_129S1SvImJ_G0026160.1 mouse_genomes_project 2 93317168 93318366 - Dgkz protein_coding retained_intron MGP_129S1SvImJ_T0056187.1 MGP_129S1SvImJ_G0026160.1 mouse_genomes_project 2 93317226 93319284 - Dgkz protein_coding retained_intron MGP_129S1SvImJ_T0056188.1 MGP_129S1SvImJ_G0026160.1 mouse_genomes_project 2 93317239 93318296 - Dgkz protein_coding retained_intron MGP_129S1SvImJ_T0056189.1 MGP_129S1SvImJ_G0026160.1 mouse_genomes_project 2 93317565 93319385 - Dgkz protein_coding retained_intron MGP_129S1SvImJ_T0056190.1 MGP_129S1SvImJ_G0026160.1 mouse_genomes_project 2 93319691 93321813 - Dgkz protein_coding processed_transcript MGP_129S1SvImJ_T0056191.1 MGP_129S1SvImJ_G0026160.1 mouse_genomes_project 2 93324542 93334096 - MGP_129S1SvImJ_P0056191 Dgkz protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056192.1 MGP_129S1SvImJ_G0026160.1 mouse_genomes_project 2 93324793 93329042 - Dgkz protein_coding processed_transcript MGP_129S1SvImJ_T0100931.1 MGP_129S1SvImJ_G0038998.1 mouse_genomes_project 2 31726536 31726673 - Gm23546 snoRNA snoRNA MGP_129S1SvImJ_T0054003.1 MGP_129S1SvImJ_G0025592.1 mouse_genomes_project 2 30276344 30339673 + MGP_129S1SvImJ_P0054003 Lamc3 protein_coding protein_coding MGP_129S1SvImJ_T0054004.1 MGP_129S1SvImJ_G0025592.1 mouse_genomes_project 2 30276397 30340966 + MGP_129S1SvImJ_P0054004 Lamc3 protein_coding protein_coding MGP_129S1SvImJ_T0054005.1 MGP_129S1SvImJ_G0025592.1 mouse_genomes_project 2 30315973 30316612 + Lamc3 protein_coding processed_transcript MGP_129S1SvImJ_T0055050.1 MGP_129S1SvImJ_G0025781.1 mouse_genomes_project 2 65668551 65866796 + MGP_129S1SvImJ_P0055050 Csrnp3 protein_coding protein_coding MGP_129S1SvImJ_T0055051.1 MGP_129S1SvImJ_G0025781.1 mouse_genomes_project 2 65668626 65860856 + MGP_129S1SvImJ_P0055051 Csrnp3 protein_coding protein_coding MGP_129S1SvImJ_T0055052.1 MGP_129S1SvImJ_G0025781.1 mouse_genomes_project 2 65668629 65702744 + Csrnp3 protein_coding retained_intron MGP_129S1SvImJ_T0055053.1 MGP_129S1SvImJ_G0025781.1 mouse_genomes_project 2 65668639 65858528 + MGP_129S1SvImJ_P0055053 Csrnp3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055054.1 MGP_129S1SvImJ_G0025781.1 mouse_genomes_project 2 65683030 65778607 + Csrnp3 protein_coding retained_intron MGP_129S1SvImJ_T0055055.1 MGP_129S1SvImJ_G0025781.1 mouse_genomes_project 2 65759626 65859195 + MGP_129S1SvImJ_P0055055 Csrnp3 protein_coding protein_coding MGP_129S1SvImJ_T0055056.1 MGP_129S1SvImJ_G0025781.1 mouse_genomes_project 2 65761354 65858733 + MGP_129S1SvImJ_P0055056 Csrnp3 protein_coding protein_coding MGP_129S1SvImJ_T0055057.1 MGP_129S1SvImJ_G0025781.1 mouse_genomes_project 2 65778116 65858302 + MGP_129S1SvImJ_P0055057 Csrnp3 protein_coding protein_coding MGP_129S1SvImJ_T0058918.1 MGP_129S1SvImJ_G0026793.1 mouse_genomes_project 2 163449363 163459861 + MGP_129S1SvImJ_P0058918 Snhg11 protein_coding protein_coding MGP_129S1SvImJ_T0058919.1 MGP_129S1SvImJ_G0026793.1 mouse_genomes_project 2 163449386 163450932 + Snhg11 protein_coding retained_intron MGP_129S1SvImJ_T0058920.1 MGP_129S1SvImJ_G0026793.1 mouse_genomes_project 2 163449423 163455315 + MGP_129S1SvImJ_P0058920 Snhg11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058921.1 MGP_129S1SvImJ_G0026793.1 mouse_genomes_project 2 163449440 163452788 + Snhg11 protein_coding retained_intron MGP_129S1SvImJ_T0058922.1 MGP_129S1SvImJ_G0026793.1 mouse_genomes_project 2 163449450 163454788 + MGP_129S1SvImJ_P0058922 Snhg11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055871.1 MGP_129S1SvImJ_G0026065.1 mouse_genomes_project 2 89918113 89919046 - MGP_129S1SvImJ_P0055871 Olfr1199 protein_coding protein_coding MGP_129S1SvImJ_T0010417.1 MGP_129S1SvImJ_G0008533.1 mouse_genomes_project 2 31131224 31131310 + Mir1954 miRNA miRNA MGP_129S1SvImJ_T0055326.1 MGP_129S1SvImJ_G0025837.1 mouse_genomes_project 2 73613723 73661509 - MGP_129S1SvImJ_P0055326 Gpr155 protein_coding protein_coding MGP_129S1SvImJ_T0055327.1 MGP_129S1SvImJ_G0025837.1 mouse_genomes_project 2 73614175 73661349 - MGP_129S1SvImJ_P0055327 Gpr155 protein_coding protein_coding MGP_129S1SvImJ_T0055328.1 MGP_129S1SvImJ_G0025837.1 mouse_genomes_project 2 73615207 73661380 - MGP_129S1SvImJ_P0055328 Gpr155 protein_coding protein_coding MGP_129S1SvImJ_T0055329.1 MGP_129S1SvImJ_G0025837.1 mouse_genomes_project 2 73619864 73637456 - MGP_129S1SvImJ_P0055329 Gpr155 protein_coding protein_coding MGP_129S1SvImJ_T0055330.1 MGP_129S1SvImJ_G0025837.1 mouse_genomes_project 2 73623109 73661335 - Gpr155 protein_coding processed_transcript MGP_129S1SvImJ_T0055331.1 MGP_129S1SvImJ_G0025837.1 mouse_genomes_project 2 73623109 73661335 - Gpr155 protein_coding retained_intron MGP_129S1SvImJ_T0055332.1 MGP_129S1SvImJ_G0025837.1 mouse_genomes_project 2 73637364 73645074 - Gpr155 protein_coding processed_transcript MGP_129S1SvImJ_T0055333.1 MGP_129S1SvImJ_G0025837.1 mouse_genomes_project 2 73656342 73661348 - Gpr155 protein_coding retained_intron MGP_129S1SvImJ_T0013811.1 MGP_129S1SvImJ_G0011900.1 mouse_genomes_project 2 148871300 148873551 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057232.1 MGP_129S1SvImJ_G0026395.1 mouse_genomes_project 2 124356158 124361422 + MGP_129S1SvImJ_P0057232 Hypk protein_coding protein_coding MGP_129S1SvImJ_T0057233.1 MGP_129S1SvImJ_G0026395.1 mouse_genomes_project 2 124359607 124361348 + Hypk protein_coding retained_intron MGP_129S1SvImJ_T0057234.1 MGP_129S1SvImJ_G0026395.1 mouse_genomes_project 2 124359877 124361584 + MGP_129S1SvImJ_P0057234 Hypk protein_coding protein_coding MGP_129S1SvImJ_T0057235.1 MGP_129S1SvImJ_G0026395.1 mouse_genomes_project 2 124360038 124361221 + Hypk protein_coding retained_intron MGP_129S1SvImJ_T0057236.1 MGP_129S1SvImJ_G0026395.1 mouse_genomes_project 2 124360048 124361275 + Hypk protein_coding processed_transcript MGP_129S1SvImJ_T0054845.1 MGP_129S1SvImJ_G0025750.1 mouse_genomes_project 2 58012088 58013051 + MGP_129S1SvImJ_P0054845 Gm17409 protein_coding protein_coding MGP_129S1SvImJ_T0001064.1 MGP_129S1SvImJ_G0000993.1 mouse_genomes_project 2 10596603 10598863 - TEC TEC MGP_129S1SvImJ_T0054058.1 MGP_129S1SvImJ_G0025600.1 mouse_genomes_project 2 30724023 30733213 - MGP_129S1SvImJ_P0054058 Swi5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054059.1 MGP_129S1SvImJ_G0025600.1 mouse_genomes_project 2 30724023 30733276 - MGP_129S1SvImJ_P0054059 Swi5 protein_coding protein_coding MGP_129S1SvImJ_T0054060.1 MGP_129S1SvImJ_G0025600.1 mouse_genomes_project 2 30724023 30728072 - MGP_129S1SvImJ_P0054060 Swi5 protein_coding protein_coding MGP_129S1SvImJ_T0054061.1 MGP_129S1SvImJ_G0025600.1 mouse_genomes_project 2 30724023 30733143 - MGP_129S1SvImJ_P0054061 Swi5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054062.1 MGP_129S1SvImJ_G0025600.1 mouse_genomes_project 2 30724023 30733283 - MGP_129S1SvImJ_P0054062 Swi5 protein_coding protein_coding MGP_129S1SvImJ_T0054063.1 MGP_129S1SvImJ_G0025600.1 mouse_genomes_project 2 30724125 30733277 - MGP_129S1SvImJ_P0054063 Swi5 protein_coding protein_coding MGP_129S1SvImJ_T0054064.1 MGP_129S1SvImJ_G0025600.1 mouse_genomes_project 2 30728488 30733239 - Swi5 protein_coding retained_intron MGP_129S1SvImJ_T0011537.1 MGP_129S1SvImJ_G0009653.1 mouse_genomes_project 2 151524552 151524876 - Gm22261 misc_RNA misc_RNA MGP_129S1SvImJ_T0053042.1 MGP_129S1SvImJ_G0025427.1 mouse_genomes_project 2 23095264 23100729 - MGP_129S1SvImJ_P0053042 Slc34a3 protein_coding protein_coding MGP_129S1SvImJ_T0053043.1 MGP_129S1SvImJ_G0025427.1 mouse_genomes_project 2 23097148 23099416 - Slc34a3 protein_coding processed_transcript MGP_129S1SvImJ_T0053044.1 MGP_129S1SvImJ_G0025427.1 mouse_genomes_project 2 23098330 23100583 - Slc34a3 protein_coding processed_transcript MGP_129S1SvImJ_T0053045.1 MGP_129S1SvImJ_G0025427.1 mouse_genomes_project 2 23098371 23100576 - Slc34a3 protein_coding processed_transcript MGP_129S1SvImJ_T0053046.1 MGP_129S1SvImJ_G0025427.1 mouse_genomes_project 2 23098376 23100078 - Slc34a3 protein_coding processed_transcript MGP_129S1SvImJ_T0053047.1 MGP_129S1SvImJ_G0025427.1 mouse_genomes_project 2 23098647 23100599 - Slc34a3 protein_coding processed_transcript MGP_129S1SvImJ_T0053048.1 MGP_129S1SvImJ_G0025427.1 mouse_genomes_project 2 23098795 23100553 - Slc34a3 protein_coding processed_transcript MGP_129S1SvImJ_T0058936.1 MGP_129S1SvImJ_G0026796.1 mouse_genomes_project 2 163590207 163627951 + MGP_129S1SvImJ_P0058936 Arhgap40 protein_coding protein_coding MGP_129S1SvImJ_T0058937.1 MGP_129S1SvImJ_G0026796.1 mouse_genomes_project 2 163590207 163628085 + MGP_129S1SvImJ_P0058937 Arhgap40 protein_coding protein_coding MGP_129S1SvImJ_T0058938.1 MGP_129S1SvImJ_G0026796.1 mouse_genomes_project 2 163619047 163628085 + Arhgap40 protein_coding retained_intron MGP_129S1SvImJ_T0054333.1 MGP_129S1SvImJ_G0025640.1 mouse_genomes_project 2 33377614 33383192 + MGP_129S1SvImJ_P0054333 Hspa5 protein_coding protein_coding MGP_129S1SvImJ_T0054334.1 MGP_129S1SvImJ_G0025640.1 mouse_genomes_project 2 33377739 33382176 + MGP_129S1SvImJ_P0054334 Hspa5 protein_coding protein_coding MGP_129S1SvImJ_T0054335.1 MGP_129S1SvImJ_G0025640.1 mouse_genomes_project 2 33377743 33378952 + MGP_129S1SvImJ_P0054335 Hspa5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054336.1 MGP_129S1SvImJ_G0025640.1 mouse_genomes_project 2 33378225 33379837 + Hspa5 protein_coding retained_intron MGP_129S1SvImJ_T0054337.1 MGP_129S1SvImJ_G0025640.1 mouse_genomes_project 2 33379310 33379978 + Hspa5 protein_coding retained_intron MGP_129S1SvImJ_T0054338.1 MGP_129S1SvImJ_G0025640.1 mouse_genomes_project 2 33380491 33381260 + Hspa5 protein_coding retained_intron MGP_129S1SvImJ_T0054227.1 MGP_129S1SvImJ_G0025625.1 mouse_genomes_project 2 31281090 31343880 - MGP_129S1SvImJ_P0054227 Stxbp1 protein_coding protein_coding MGP_129S1SvImJ_T0054228.1 MGP_129S1SvImJ_G0025625.1 mouse_genomes_project 2 31281095 31310682 - Stxbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0054229.1 MGP_129S1SvImJ_G0025625.1 mouse_genomes_project 2 31281449 31343837 - MGP_129S1SvImJ_P0054229 Stxbp1 protein_coding protein_coding MGP_129S1SvImJ_T0054230.1 MGP_129S1SvImJ_G0025625.1 mouse_genomes_project 2 31310005 31311088 - Stxbp1 protein_coding retained_intron MGP_129S1SvImJ_T0007245.1 MGP_129S1SvImJ_G0005943.1 mouse_genomes_project 2 75069105 75070166 + Gm14424 lincRNA lincRNA MGP_129S1SvImJ_T0053157.1 MGP_129S1SvImJ_G0025447.1 mouse_genomes_project 2 23343657 23349469 - BC029214 protein_coding processed_transcript MGP_129S1SvImJ_T0053158.1 MGP_129S1SvImJ_G0025447.1 mouse_genomes_project 2 23343657 23348717 - BC029214 protein_coding processed_transcript MGP_129S1SvImJ_T0053165.1 MGP_129S1SvImJ_G0025447.1 mouse_genomes_project 2 23347966 23348834 - BC029214 protein_coding processed_transcript MGP_129S1SvImJ_T0053166.1 MGP_129S1SvImJ_G0025447.1 mouse_genomes_project 2 23347998 23349611 - MGP_129S1SvImJ_P0053166 BC029214 protein_coding protein_coding MGP_129S1SvImJ_T0053167.1 MGP_129S1SvImJ_G0025447.1 mouse_genomes_project 2 23348000 23349589 - BC029214 protein_coding processed_transcript MGP_129S1SvImJ_T0053168.1 MGP_129S1SvImJ_G0025447.1 mouse_genomes_project 2 23348001 23348796 - BC029214 protein_coding processed_transcript MGP_129S1SvImJ_T0053169.1 MGP_129S1SvImJ_G0025447.1 mouse_genomes_project 2 23348001 23349181 - BC029214 protein_coding processed_transcript MGP_129S1SvImJ_T0053170.1 MGP_129S1SvImJ_G0025447.1 mouse_genomes_project 2 23348047 23349525 - BC029214 protein_coding processed_transcript MGP_129S1SvImJ_T0053171.1 MGP_129S1SvImJ_G0025447.1 mouse_genomes_project 2 23348077 23349482 - BC029214 protein_coding processed_transcript MGP_129S1SvImJ_T0053172.1 MGP_129S1SvImJ_G0025447.1 mouse_genomes_project 2 23348331 23349548 - MGP_129S1SvImJ_P0053172 BC029214 protein_coding protein_coding MGP_129S1SvImJ_T0053173.1 MGP_129S1SvImJ_G0025447.1 mouse_genomes_project 2 23348528 23349540 - BC029214 protein_coding processed_transcript MGP_129S1SvImJ_T0053174.1 MGP_129S1SvImJ_G0025447.1 mouse_genomes_project 2 23348544 23349444 - BC029214 protein_coding processed_transcript MGP_129S1SvImJ_T0053175.1 MGP_129S1SvImJ_G0025447.1 mouse_genomes_project 2 23348775 23349465 - BC029214 protein_coding processed_transcript MGP_129S1SvImJ_T0055687.1 MGP_129S1SvImJ_G0025918.1 mouse_genomes_project 2 85694364 85699903 + Prg3 protein_coding processed_transcript MGP_129S1SvImJ_T0055688.1 MGP_129S1SvImJ_G0025918.1 mouse_genomes_project 2 85694364 85700013 + MGP_129S1SvImJ_P0055688 Prg3 protein_coding protein_coding MGP_129S1SvImJ_T0004194.1 MGP_129S1SvImJ_G0003706.1 mouse_genomes_project 2 176632026 176634392 + Gm14637 antisense antisense MGP_129S1SvImJ_T0010385.1 MGP_129S1SvImJ_G0008501.1 mouse_genomes_project 2 7878072 7878170 + Mir297a-4 miRNA miRNA MGP_129S1SvImJ_T0058450.1 MGP_129S1SvImJ_G0026707.1 mouse_genomes_project 2 158863164 158869522 + MGP_129S1SvImJ_P0058450 Bpifa1 protein_coding protein_coding MGP_129S1SvImJ_T0058451.1 MGP_129S1SvImJ_G0026707.1 mouse_genomes_project 2 158863183 158865489 + Bpifa1 protein_coding processed_transcript MGP_129S1SvImJ_T0058452.1 MGP_129S1SvImJ_G0026707.1 mouse_genomes_project 2 158864660 158868052 + Bpifa1 protein_coding processed_transcript MGP_129S1SvImJ_T0004124.1 MGP_129S1SvImJ_G0003650.1 mouse_genomes_project 2 145194837 145251565 - Macrod2os1 antisense antisense MGP_129S1SvImJ_T0057480.1 MGP_129S1SvImJ_G0026455.1 mouse_genomes_project 2 130547866 130563303 + Stard7 protein_coding processed_transcript MGP_129S1SvImJ_T0057481.1 MGP_129S1SvImJ_G0026455.1 mouse_genomes_project 2 130548230 130582333 + MGP_129S1SvImJ_P0057481 Stard7 protein_coding protein_coding MGP_129S1SvImJ_T0057482.1 MGP_129S1SvImJ_G0026455.1 mouse_genomes_project 2 130548352 130582326 + MGP_129S1SvImJ_P0057482 Stard7 protein_coding protein_coding MGP_129S1SvImJ_T0057483.1 MGP_129S1SvImJ_G0026455.1 mouse_genomes_project 2 130562952 130579236 + Stard7 protein_coding retained_intron MGP_129S1SvImJ_T0057484.1 MGP_129S1SvImJ_G0026455.1 mouse_genomes_project 2 130571457 130580707 + Stard7 protein_coding retained_intron MGP_129S1SvImJ_T0057485.1 MGP_129S1SvImJ_G0026455.1 mouse_genomes_project 2 130575502 130580732 + Stard7 protein_coding processed_transcript MGP_129S1SvImJ_T0057486.1 MGP_129S1SvImJ_G0026455.1 mouse_genomes_project 2 130575504 130580761 + Stard7 protein_coding processed_transcript MGP_129S1SvImJ_T0054033.1 MGP_129S1SvImJ_G0025597.1 mouse_genomes_project 2 30571723 30669207 + MGP_129S1SvImJ_P0054033 Prrc2b protein_coding protein_coding MGP_129S1SvImJ_T0054034.1 MGP_129S1SvImJ_G0025597.1 mouse_genomes_project 2 30573763 30669192 + MGP_129S1SvImJ_P0054034 Prrc2b protein_coding protein_coding MGP_129S1SvImJ_T0054035.1 MGP_129S1SvImJ_G0025597.1 mouse_genomes_project 2 30609638 30665832 + MGP_129S1SvImJ_P0054035 Prrc2b protein_coding protein_coding MGP_129S1SvImJ_T0054036.1 MGP_129S1SvImJ_G0025597.1 mouse_genomes_project 2 30636269 30649545 + Prrc2b protein_coding processed_transcript MGP_129S1SvImJ_T0054037.1 MGP_129S1SvImJ_G0025597.1 mouse_genomes_project 2 30642084 30649204 + MGP_129S1SvImJ_P0054037 Prrc2b protein_coding protein_coding MGP_129S1SvImJ_T0054038.1 MGP_129S1SvImJ_G0025597.1 mouse_genomes_project 2 30645964 30649499 + MGP_129S1SvImJ_P0054038 Prrc2b protein_coding protein_coding MGP_129S1SvImJ_T0054039.1 MGP_129S1SvImJ_G0025597.1 mouse_genomes_project 2 30647098 30649043 + Prrc2b protein_coding processed_transcript MGP_129S1SvImJ_T0054040.1 MGP_129S1SvImJ_G0025597.1 mouse_genomes_project 2 30647166 30651254 + Prrc2b protein_coding processed_transcript MGP_129S1SvImJ_T0054041.1 MGP_129S1SvImJ_G0025597.1 mouse_genomes_project 2 30649416 30652206 + Prrc2b protein_coding processed_transcript MGP_129S1SvImJ_T0054042.1 MGP_129S1SvImJ_G0025597.1 mouse_genomes_project 2 30649654 30651322 + Prrc2b protein_coding processed_transcript MGP_129S1SvImJ_T0007219.1 MGP_129S1SvImJ_G0005922.1 mouse_genomes_project 2 62120838 62125098 - Gm13565 lincRNA lincRNA MGP_129S1SvImJ_T0010460.1 MGP_129S1SvImJ_G0008576.1 mouse_genomes_project 2 108177759 108177884 + Gm22002 miRNA miRNA MGP_129S1SvImJ_T0054758.1 MGP_129S1SvImJ_G0025732.1 mouse_genomes_project 2 51386455 51443307 + MGP_129S1SvImJ_P0054758 Rif1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0054759.1 MGP_129S1SvImJ_G0025732.1 mouse_genomes_project 2 51386535 51439040 + MGP_129S1SvImJ_P0054759 Rif1 protein_coding protein_coding MGP_129S1SvImJ_T0054760.1 MGP_129S1SvImJ_G0025732.1 mouse_genomes_project 2 51386540 51439042 + MGP_129S1SvImJ_P0054760 Rif1 protein_coding protein_coding MGP_129S1SvImJ_T0054761.1 MGP_129S1SvImJ_G0025732.1 mouse_genomes_project 2 51386770 51392449 + Rif1 protein_coding processed_transcript MGP_129S1SvImJ_T0054762.1 MGP_129S1SvImJ_G0025732.1 mouse_genomes_project 2 51405790 51423182 + Rif1 protein_coding processed_transcript MGP_129S1SvImJ_T0054763.1 MGP_129S1SvImJ_G0025732.1 mouse_genomes_project 2 51409367 51414613 + Rif1 protein_coding processed_transcript MGP_129S1SvImJ_T0054764.1 MGP_129S1SvImJ_G0025732.1 mouse_genomes_project 2 51426450 51438714 + Rif1 protein_coding processed_transcript MGP_129S1SvImJ_T0054765.1 MGP_129S1SvImJ_G0025732.1 mouse_genomes_project 2 51426927 51438767 + Rif1 protein_coding processed_transcript MGP_129S1SvImJ_T0054766.1 MGP_129S1SvImJ_G0025732.1 mouse_genomes_project 2 51427599 51439040 + Rif1 protein_coding processed_transcript MGP_129S1SvImJ_T0001119.1 MGP_129S1SvImJ_G0001047.1 mouse_genomes_project 2 132576516 132578459 - TEC TEC MGP_129S1SvImJ_T0059661.1 MGP_129S1SvImJ_G0026982.1 mouse_genomes_project 2 186522093 186532547 + MGP_129S1SvImJ_P0059661 Lsm14b protein_coding protein_coding MGP_129S1SvImJ_T0059662.1 MGP_129S1SvImJ_G0026982.1 mouse_genomes_project 2 186522292 186532554 + MGP_129S1SvImJ_P0059662 Lsm14b protein_coding protein_coding MGP_129S1SvImJ_T0059663.1 MGP_129S1SvImJ_G0026982.1 mouse_genomes_project 2 186525012 186530892 + Lsm14b protein_coding processed_transcript MGP_129S1SvImJ_T0052421.1 MGP_129S1SvImJ_G0025324.1 mouse_genomes_project 2 2977314 3005487 + MGP_129S1SvImJ_P0052421 Nudt5 protein_coding protein_coding MGP_129S1SvImJ_T0052422.1 MGP_129S1SvImJ_G0025324.1 mouse_genomes_project 2 2977329 3002385 + MGP_129S1SvImJ_P0052422 Nudt5 protein_coding protein_coding MGP_129S1SvImJ_T0052423.1 MGP_129S1SvImJ_G0025324.1 mouse_genomes_project 2 2977548 2990068 + Nudt5 protein_coding retained_intron MGP_129S1SvImJ_T0052424.1 MGP_129S1SvImJ_G0025324.1 mouse_genomes_project 2 2977548 2997096 + MGP_129S1SvImJ_P0052424 Nudt5 protein_coding protein_coding MGP_129S1SvImJ_T0052425.1 MGP_129S1SvImJ_G0025324.1 mouse_genomes_project 2 2977585 2995036 + MGP_129S1SvImJ_P0052425 Nudt5 protein_coding protein_coding MGP_129S1SvImJ_T0052426.1 MGP_129S1SvImJ_G0025324.1 mouse_genomes_project 2 2980424 2993883 + Nudt5 protein_coding processed_transcript MGP_129S1SvImJ_T0004203.1 MGP_129S1SvImJ_G0003712.1 mouse_genomes_project 2 180462313 180527105 - Gm10714 antisense antisense MGP_129S1SvImJ_T0004204.1 MGP_129S1SvImJ_G0003712.1 mouse_genomes_project 2 180462835 180463164 - Gm10714 antisense antisense MGP_129S1SvImJ_T0017790.1 MGP_129S1SvImJ_G0015409.1 mouse_genomes_project 2 28526139 28547089 - Gm14471 processed_transcript processed_transcript MGP_129S1SvImJ_T0056658.1 MGP_129S1SvImJ_G0026273.1 mouse_genomes_project 2 114277196 114313941 - MGP_129S1SvImJ_P0056658 Olfr1303 protein_coding protein_coding MGP_129S1SvImJ_T0003927.1 MGP_129S1SvImJ_G0003511.1 mouse_genomes_project 2 17168327 17171207 - Gm13344 antisense antisense MGP_129S1SvImJ_T0057650.1 MGP_129S1SvImJ_G0026498.1 mouse_genomes_project 2 133728050 133733283 - MGP_129S1SvImJ_P0057650 Idh3b protein_coding protein_coding MGP_129S1SvImJ_T0057651.1 MGP_129S1SvImJ_G0026498.1 mouse_genomes_project 2 133728054 133729293 - MGP_129S1SvImJ_P0057651 Idh3b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057652.1 MGP_129S1SvImJ_G0026498.1 mouse_genomes_project 2 133730886 133733170 - Idh3b protein_coding retained_intron MGP_129S1SvImJ_T0057653.1 MGP_129S1SvImJ_G0026498.1 mouse_genomes_project 2 133732398 133733151 - Idh3b protein_coding retained_intron MGP_129S1SvImJ_T0013522.1 MGP_129S1SvImJ_G0011611.1 mouse_genomes_project 2 39106285 39106802 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102438.1 MGP_129S1SvImJ_G0040272.1 mouse_genomes_project 2 122031644 122031885 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0057441.1 MGP_129S1SvImJ_G0026446.1 mouse_genomes_project 2 130129927 130174139 - MGP_129S1SvImJ_P0057441 Sppl2a protein_coding protein_coding MGP_129S1SvImJ_T0057442.1 MGP_129S1SvImJ_G0026446.1 mouse_genomes_project 2 130133800 130160550 - MGP_129S1SvImJ_P0057442 Sppl2a protein_coding protein_coding MGP_129S1SvImJ_T0057443.1 MGP_129S1SvImJ_G0026446.1 mouse_genomes_project 2 130155078 130164617 - Sppl2a protein_coding retained_intron MGP_129S1SvImJ_T0053949.1 MGP_129S1SvImJ_G0025582.1 mouse_genomes_project 2 29463809 29535600 + MGP_129S1SvImJ_P0053949 Gpr107 protein_coding protein_coding MGP_129S1SvImJ_T0053950.1 MGP_129S1SvImJ_G0025582.1 mouse_genomes_project 2 29463826 29482743 + Gpr107 protein_coding retained_intron MGP_129S1SvImJ_T0053951.1 MGP_129S1SvImJ_G0025582.1 mouse_genomes_project 2 29463844 29508845 + Gpr107 protein_coding retained_intron MGP_129S1SvImJ_T0053952.1 MGP_129S1SvImJ_G0025582.1 mouse_genomes_project 2 29463844 29467437 + Gpr107 protein_coding retained_intron MGP_129S1SvImJ_T0053953.1 MGP_129S1SvImJ_G0025582.1 mouse_genomes_project 2 29485853 29501583 + Gpr107 protein_coding processed_transcript MGP_129S1SvImJ_T0053954.1 MGP_129S1SvImJ_G0025582.1 mouse_genomes_project 2 29502008 29525983 + Gpr107 protein_coding retained_intron MGP_129S1SvImJ_T0053955.1 MGP_129S1SvImJ_G0025582.1 mouse_genomes_project 2 29502338 29505482 + Gpr107 protein_coding processed_transcript MGP_129S1SvImJ_T0053956.1 MGP_129S1SvImJ_G0025582.1 mouse_genomes_project 2 29505500 29526165 + Gpr107 protein_coding retained_intron MGP_129S1SvImJ_T0053957.1 MGP_129S1SvImJ_G0025582.1 mouse_genomes_project 2 29513593 29524532 + Gpr107 protein_coding processed_transcript MGP_129S1SvImJ_T0053958.1 MGP_129S1SvImJ_G0025582.1 mouse_genomes_project 2 29523456 29526887 + Gpr107 protein_coding retained_intron MGP_129S1SvImJ_T0053959.1 MGP_129S1SvImJ_G0025582.1 mouse_genomes_project 2 29526924 29531391 + Gpr107 protein_coding retained_intron MGP_129S1SvImJ_T0053421.1 MGP_129S1SvImJ_G0025498.1 mouse_genomes_project 2 24876904 24882320 - MGP_129S1SvImJ_P0053421 Med22 protein_coding protein_coding MGP_129S1SvImJ_T0053422.1 MGP_129S1SvImJ_G0025498.1 mouse_genomes_project 2 24877230 24882212 - MGP_129S1SvImJ_P0053422 Med22 protein_coding protein_coding MGP_129S1SvImJ_T0053423.1 MGP_129S1SvImJ_G0025498.1 mouse_genomes_project 2 24879751 24882221 - MGP_129S1SvImJ_P0053423 Med22 protein_coding protein_coding MGP_129S1SvImJ_T0099674.1 MGP_129S1SvImJ_G0037741.1 mouse_genomes_project 2 54435643 54435784 + Gm25489 snRNA snRNA MGP_129S1SvImJ_T0057538.1 MGP_129S1SvImJ_G0026471.1 mouse_genomes_project 2 131443574 131447552 + Bcl2l11 protein_coding processed_transcript MGP_129S1SvImJ_T0057539.1 MGP_129S1SvImJ_G0026471.1 mouse_genomes_project 2 131443574 131449032 + MGP_129S1SvImJ_P0057539 Bcl2l11 protein_coding protein_coding MGP_129S1SvImJ_T0057540.1 MGP_129S1SvImJ_G0026471.1 mouse_genomes_project 2 131443574 131479992 + MGP_129S1SvImJ_P0057540 Bcl2l11 protein_coding protein_coding MGP_129S1SvImJ_T0057541.1 MGP_129S1SvImJ_G0026471.1 mouse_genomes_project 2 131443575 131481578 + MGP_129S1SvImJ_P0057541 Bcl2l11 protein_coding protein_coding MGP_129S1SvImJ_T0057542.1 MGP_129S1SvImJ_G0026471.1 mouse_genomes_project 2 131443576 131477471 + MGP_129S1SvImJ_P0057542 Bcl2l11 protein_coding protein_coding MGP_129S1SvImJ_T0057543.1 MGP_129S1SvImJ_G0026471.1 mouse_genomes_project 2 131443586 131480259 + MGP_129S1SvImJ_P0057543 Bcl2l11 protein_coding protein_coding MGP_129S1SvImJ_T0057544.1 MGP_129S1SvImJ_G0026471.1 mouse_genomes_project 2 131445111 131447682 + Bcl2l11 protein_coding processed_transcript MGP_129S1SvImJ_T0057545.1 MGP_129S1SvImJ_G0026471.1 mouse_genomes_project 2 131445667 131446274 + Bcl2l11 protein_coding processed_transcript MGP_129S1SvImJ_T0013736.1 MGP_129S1SvImJ_G0011825.1 mouse_genomes_project 2 114201914 114205256 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055760.1 MGP_129S1SvImJ_G0025968.1 mouse_genomes_project 2 87198745 87206042 - MGP_129S1SvImJ_P0055760 Olfr1055 protein_coding protein_coding MGP_129S1SvImJ_T0052940.1 MGP_129S1SvImJ_G0025412.1 mouse_genomes_project 2 22623650 22734000 - MGP_129S1SvImJ_P0052940 Ehmt1 protein_coding protein_coding MGP_129S1SvImJ_T0052941.1 MGP_129S1SvImJ_G0025412.1 mouse_genomes_project 2 22623998 22639253 - MGP_129S1SvImJ_P0052941 Ehmt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052942.1 MGP_129S1SvImJ_G0025412.1 mouse_genomes_project 2 22623998 22761477 - MGP_129S1SvImJ_P0052942 Ehmt1 protein_coding protein_coding MGP_129S1SvImJ_T0052943.1 MGP_129S1SvImJ_G0025412.1 mouse_genomes_project 2 22623998 22761477 - MGP_129S1SvImJ_P0052943 Ehmt1 protein_coding protein_coding MGP_129S1SvImJ_T0052944.1 MGP_129S1SvImJ_G0025412.1 mouse_genomes_project 2 22624805 22761519 - MGP_129S1SvImJ_P0052944 Ehmt1 protein_coding protein_coding MGP_129S1SvImJ_T0052945.1 MGP_129S1SvImJ_G0025412.1 mouse_genomes_project 2 22638130 22661078 - Ehmt1 protein_coding retained_intron MGP_129S1SvImJ_T0052946.1 MGP_129S1SvImJ_G0025412.1 mouse_genomes_project 2 22639167 22676669 - MGP_129S1SvImJ_P0052946 Ehmt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052947.1 MGP_129S1SvImJ_G0025412.1 mouse_genomes_project 2 22639225 22640180 - Ehmt1 protein_coding processed_transcript MGP_129S1SvImJ_T0052948.1 MGP_129S1SvImJ_G0025412.1 mouse_genomes_project 2 22659014 22761493 - MGP_129S1SvImJ_P0052948 Ehmt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052949.1 MGP_129S1SvImJ_G0025412.1 mouse_genomes_project 2 22660658 22689803 - MGP_129S1SvImJ_P0052949 Ehmt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052950.1 MGP_129S1SvImJ_G0025412.1 mouse_genomes_project 2 22672179 22761482 - Ehmt1 protein_coding retained_intron MGP_129S1SvImJ_T0052951.1 MGP_129S1SvImJ_G0025412.1 mouse_genomes_project 2 22685104 22715497 - MGP_129S1SvImJ_P0052951 Ehmt1 protein_coding protein_coding MGP_129S1SvImJ_T0052952.1 MGP_129S1SvImJ_G0025412.1 mouse_genomes_project 2 22700650 22725412 - MGP_129S1SvImJ_P0052952 Ehmt1 protein_coding protein_coding MGP_129S1SvImJ_T0052953.1 MGP_129S1SvImJ_G0025412.1 mouse_genomes_project 2 22700719 22761510 - MGP_129S1SvImJ_P0052953 Ehmt1 protein_coding protein_coding MGP_129S1SvImJ_T0052954.1 MGP_129S1SvImJ_G0025412.1 mouse_genomes_project 2 22701316 22761501 - MGP_129S1SvImJ_P0052954 Ehmt1 protein_coding protein_coding MGP_129S1SvImJ_T0003935.1 MGP_129S1SvImJ_G0003519.1 mouse_genomes_project 2 23039793 23042352 - Gm38287 antisense antisense MGP_129S1SvImJ_T0054561.1 MGP_129S1SvImJ_G0025701.1 mouse_genomes_project 2 37086075 37100254 + Lhx2 protein_coding retained_intron MGP_129S1SvImJ_T0054562.1 MGP_129S1SvImJ_G0025701.1 mouse_genomes_project 2 37087683 37101386 + MGP_129S1SvImJ_P0054562 Lhx2 protein_coding protein_coding MGP_129S1SvImJ_T0054563.1 MGP_129S1SvImJ_G0025701.1 mouse_genomes_project 2 37098328 37101192 + MGP_129S1SvImJ_P0054563 Lhx2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054564.1 MGP_129S1SvImJ_G0025701.1 mouse_genomes_project 2 37098334 37117411 + MGP_129S1SvImJ_P0054564 Lhx2 protein_coding protein_coding MGP_129S1SvImJ_T0054565.1 MGP_129S1SvImJ_G0025701.1 mouse_genomes_project 2 37099092 37101134 + MGP_129S1SvImJ_P0054565 Lhx2 protein_coding protein_coding MGP_129S1SvImJ_T0054566.1 MGP_129S1SvImJ_G0025701.1 mouse_genomes_project 2 37100362 37106652 + Lhx2 protein_coding retained_intron MGP_129S1SvImJ_T0052633.1 MGP_129S1SvImJ_G0025354.1 mouse_genomes_project 2 10554326 10758072 - MGP_129S1SvImJ_P0052633 Rsu1 protein_coding protein_coding MGP_129S1SvImJ_T0052634.1 MGP_129S1SvImJ_G0025354.1 mouse_genomes_project 2 10554517 10758154 - MGP_129S1SvImJ_P0052634 Rsu1 protein_coding protein_coding MGP_129S1SvImJ_T0052635.1 MGP_129S1SvImJ_G0025354.1 mouse_genomes_project 2 10554700 10758133 - MGP_129S1SvImJ_P0052635 Rsu1 protein_coding protein_coding MGP_129S1SvImJ_T0052636.1 MGP_129S1SvImJ_G0025354.1 mouse_genomes_project 2 10653016 10758047 - Rsu1 protein_coding retained_intron MGP_129S1SvImJ_T0052637.1 MGP_129S1SvImJ_G0025354.1 mouse_genomes_project 2 10701388 10758072 - Rsu1 protein_coding retained_intron MGP_129S1SvImJ_T0052638.1 MGP_129S1SvImJ_G0025354.1 mouse_genomes_project 2 10702158 10758009 - MGP_129S1SvImJ_P0052638 Rsu1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052639.1 MGP_129S1SvImJ_G0025354.1 mouse_genomes_project 2 10703981 10757960 - Rsu1 protein_coding retained_intron MGP_129S1SvImJ_T0052640.1 MGP_129S1SvImJ_G0025354.1 mouse_genomes_project 2 10704494 10758030 - MGP_129S1SvImJ_P0052640 Rsu1 protein_coding protein_coding MGP_129S1SvImJ_T0052641.1 MGP_129S1SvImJ_G0025354.1 mouse_genomes_project 2 10754199 10758050 - Rsu1 protein_coding retained_intron MGP_129S1SvImJ_T0052642.1 MGP_129S1SvImJ_G0025354.1 mouse_genomes_project 2 10757498 10758035 - Rsu1 protein_coding retained_intron MGP_129S1SvImJ_T0010461.1 MGP_129S1SvImJ_G0008577.1 mouse_genomes_project 2 115066410 115066550 + Gm44374 miRNA miRNA MGP_129S1SvImJ_T0017893.1 MGP_129S1SvImJ_G0015466.1 mouse_genomes_project 2 131517323 131763872 - Gm14005 processed_transcript processed_transcript MGP_129S1SvImJ_T0017894.1 MGP_129S1SvImJ_G0015466.1 mouse_genomes_project 2 131624469 131764054 - Gm14005 processed_transcript processed_transcript MGP_129S1SvImJ_T0017895.1 MGP_129S1SvImJ_G0015466.1 mouse_genomes_project 2 131643537 131764080 - Gm14005 processed_transcript processed_transcript MGP_129S1SvImJ_T0017896.1 MGP_129S1SvImJ_G0015466.1 mouse_genomes_project 2 131643713 131763902 - Gm14005 processed_transcript processed_transcript MGP_129S1SvImJ_T0017897.1 MGP_129S1SvImJ_G0015466.1 mouse_genomes_project 2 131675124 131763972 - Gm14005 processed_transcript processed_transcript MGP_129S1SvImJ_T0017898.1 MGP_129S1SvImJ_G0015466.1 mouse_genomes_project 2 131704684 131763918 - Gm14005 processed_transcript processed_transcript MGP_129S1SvImJ_T0017899.1 MGP_129S1SvImJ_G0015466.1 mouse_genomes_project 2 131704685 131763623 - Gm14005 processed_transcript processed_transcript MGP_129S1SvImJ_T0055341.1 MGP_129S1SvImJ_G0025839.1 mouse_genomes_project 2 73846525 73866920 - MGP_129S1SvImJ_P0055341 Chrna1 protein_coding protein_coding MGP_129S1SvImJ_T0053441.1 MGP_129S1SvImJ_G0025501.1 mouse_genomes_project 2 24888009 24891826 + MGP_129S1SvImJ_P0053441 Surf2 protein_coding protein_coding MGP_129S1SvImJ_T0053442.1 MGP_129S1SvImJ_G0025501.1 mouse_genomes_project 2 24888023 24891815 + Surf2 protein_coding processed_transcript MGP_129S1SvImJ_T0053443.1 MGP_129S1SvImJ_G0025501.1 mouse_genomes_project 2 24888311 24891464 + Surf2 protein_coding processed_transcript MGP_129S1SvImJ_T0053444.1 MGP_129S1SvImJ_G0025501.1 mouse_genomes_project 2 24888311 24891809 + Surf2 protein_coding retained_intron MGP_129S1SvImJ_T0053445.1 MGP_129S1SvImJ_G0025501.1 mouse_genomes_project 2 24888455 24891596 + Surf2 protein_coding processed_transcript MGP_129S1SvImJ_T0053446.1 MGP_129S1SvImJ_G0025501.1 mouse_genomes_project 2 24889070 24891478 + Surf2 protein_coding processed_transcript MGP_129S1SvImJ_T0098568.1 MGP_129S1SvImJ_G0036653.1 mouse_genomes_project 2 122446804 122446923 + n-R5s204 rRNA rRNA MGP_129S1SvImJ_T0054426.1 MGP_129S1SvImJ_G0025655.1 mouse_genomes_project 2 34036555 34071698 - MGP_129S1SvImJ_P0054426 Ggta1 protein_coding protein_coding MGP_129S1SvImJ_T0054427.1 MGP_129S1SvImJ_G0025655.1 mouse_genomes_project 2 34036555 34107657 - MGP_129S1SvImJ_P0054427 Ggta1 protein_coding protein_coding MGP_129S1SvImJ_T0054428.1 MGP_129S1SvImJ_G0025655.1 mouse_genomes_project 2 34036559 34107840 - MGP_129S1SvImJ_P0054428 Ggta1 protein_coding protein_coding MGP_129S1SvImJ_T0054429.1 MGP_129S1SvImJ_G0025655.1 mouse_genomes_project 2 34036559 34107640 - MGP_129S1SvImJ_P0054429 Ggta1 protein_coding protein_coding MGP_129S1SvImJ_T0054430.1 MGP_129S1SvImJ_G0025655.1 mouse_genomes_project 2 34038485 34062492 - MGP_129S1SvImJ_P0054430 Ggta1 protein_coding protein_coding MGP_129S1SvImJ_T0054431.1 MGP_129S1SvImJ_G0025655.1 mouse_genomes_project 2 34038485 34062492 - MGP_129S1SvImJ_P0054431 Ggta1 protein_coding protein_coding MGP_129S1SvImJ_T0054432.1 MGP_129S1SvImJ_G0025655.1 mouse_genomes_project 2 34047025 34082729 - MGP_129S1SvImJ_P0054432 Ggta1 protein_coding protein_coding MGP_129S1SvImJ_T0054433.1 MGP_129S1SvImJ_G0025655.1 mouse_genomes_project 2 34062493 34086459 - Ggta1 protein_coding processed_transcript MGP_129S1SvImJ_T0054434.1 MGP_129S1SvImJ_G0025655.1 mouse_genomes_project 2 34071578 34110448 - Ggta1 protein_coding processed_transcript MGP_129S1SvImJ_T0056666.1 MGP_129S1SvImJ_G0026281.1 mouse_genomes_project 2 114515837 114516776 - MGP_129S1SvImJ_P0056666 Olfr1314 protein_coding protein_coding MGP_129S1SvImJ_T0052739.1 MGP_129S1SvImJ_G0025374.1 mouse_genomes_project 2 15881552 15907487 - MGP_129S1SvImJ_P0052739 Dnajc1 protein_coding protein_coding MGP_129S1SvImJ_T0052740.1 MGP_129S1SvImJ_G0025374.1 mouse_genomes_project 2 15892231 16091540 - MGP_129S1SvImJ_P0052740 Dnajc1 protein_coding protein_coding MGP_129S1SvImJ_T0052741.1 MGP_129S1SvImJ_G0025374.1 mouse_genomes_project 2 15895127 15904832 - Dnajc1 protein_coding processed_transcript MGP_129S1SvImJ_T0052742.1 MGP_129S1SvImJ_G0025374.1 mouse_genomes_project 2 15901678 16091559 - MGP_129S1SvImJ_P0052742 Dnajc1 protein_coding protein_coding MGP_129S1SvImJ_T0052743.1 MGP_129S1SvImJ_G0025374.1 mouse_genomes_project 2 15905064 16091371 - MGP_129S1SvImJ_P0052743 Dnajc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052744.1 MGP_129S1SvImJ_G0025374.1 mouse_genomes_project 2 15905064 16091149 - MGP_129S1SvImJ_P0052744 Dnajc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052745.1 MGP_129S1SvImJ_G0025374.1 mouse_genomes_project 2 15905084 16091150 - MGP_129S1SvImJ_P0052745 Dnajc1 protein_coding protein_coding MGP_129S1SvImJ_T0052746.1 MGP_129S1SvImJ_G0025374.1 mouse_genomes_project 2 15905186 16091229 - MGP_129S1SvImJ_P0052746 Dnajc1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0052747.1 MGP_129S1SvImJ_G0025374.1 mouse_genomes_project 2 15907460 15997467 - MGP_129S1SvImJ_P0052747 Dnajc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052748.1 MGP_129S1SvImJ_G0025374.1 mouse_genomes_project 2 15997088 16000709 - Dnajc1 protein_coding retained_intron MGP_129S1SvImJ_T0052749.1 MGP_129S1SvImJ_G0025374.1 mouse_genomes_project 2 15999035 16091553 - Dnajc1 protein_coding processed_transcript MGP_129S1SvImJ_T0052750.1 MGP_129S1SvImJ_G0025374.1 mouse_genomes_project 2 16007257 16091559 - Dnajc1 protein_coding retained_intron MGP_129S1SvImJ_T0001098.1 MGP_129S1SvImJ_G0001027.1 mouse_genomes_project 2 37630119 37632078 - TEC TEC MGP_129S1SvImJ_T0007436.1 MGP_129S1SvImJ_G0006102.1 mouse_genomes_project 2 179683729 179684884 + Gm14642 lincRNA lincRNA MGP_129S1SvImJ_T0057270.1 MGP_129S1SvImJ_G0026402.1 mouse_genomes_project 2 125004457 125035410 + MGP_129S1SvImJ_P0057270 Eif3j1 protein_coding protein_coding MGP_129S1SvImJ_T0057272.1 MGP_129S1SvImJ_G0026402.1 mouse_genomes_project 2 125004563 125005246 + Eif3j1 protein_coding processed_transcript MGP_129S1SvImJ_T0013866.1 MGP_129S1SvImJ_G0011955.1 mouse_genomes_project 2 166477863 166478813 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055311.1 MGP_129S1SvImJ_G0025833.1 mouse_genomes_project 2 73351400 73485875 - MGP_129S1SvImJ_P0055311 Ola1 protein_coding protein_coding MGP_129S1SvImJ_T0055312.1 MGP_129S1SvImJ_G0025833.1 mouse_genomes_project 2 73351799 73485854 - Ola1 protein_coding processed_transcript MGP_129S1SvImJ_T0055313.1 MGP_129S1SvImJ_G0025833.1 mouse_genomes_project 2 73351801 73484388 - MGP_129S1SvImJ_P0055313 Ola1 protein_coding protein_coding MGP_129S1SvImJ_T0055314.1 MGP_129S1SvImJ_G0025833.1 mouse_genomes_project 2 73402642 73485761 - MGP_129S1SvImJ_P0055314 Ola1 protein_coding protein_coding MGP_129S1SvImJ_T0055315.1 MGP_129S1SvImJ_G0025833.1 mouse_genomes_project 2 73470141 73485840 - Ola1 protein_coding processed_transcript MGP_129S1SvImJ_T0055316.1 MGP_129S1SvImJ_G0025833.1 mouse_genomes_project 2 73484298 73490352 - Ola1 protein_coding processed_transcript MGP_129S1SvImJ_T0017809.1 MGP_129S1SvImJ_G0015420.1 mouse_genomes_project 2 56677860 56683899 + 4930555B11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0013516.1 MGP_129S1SvImJ_G0011605.1 mouse_genomes_project 2 38333282 38333765 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004157.1 MGP_129S1SvImJ_G0003677.1 mouse_genomes_project 2 161214177 161221201 - Gm14252 antisense antisense MGP_129S1SvImJ_T0099680.1 MGP_129S1SvImJ_G0037747.1 mouse_genomes_project 2 79890870 79890973 + Gm22606 snRNA snRNA MGP_129S1SvImJ_T0057833.1 MGP_129S1SvImJ_G0026538.1 mouse_genomes_project 2 135612471 135666144 - MGP_129S1SvImJ_P0057833 Slc23a2 protein_coding protein_coding MGP_129S1SvImJ_T0057834.1 MGP_129S1SvImJ_G0026538.1 mouse_genomes_project 2 135615389 135616661 - Slc23a2 protein_coding processed_transcript MGP_129S1SvImJ_T0057835.1 MGP_129S1SvImJ_G0026538.1 mouse_genomes_project 2 135620683 135627010 - Slc23a2 protein_coding processed_transcript MGP_129S1SvImJ_T0057836.1 MGP_129S1SvImJ_G0026538.1 mouse_genomes_project 2 135635169 135666144 - Slc23a2 protein_coding processed_transcript MGP_129S1SvImJ_T0057837.1 MGP_129S1SvImJ_G0026538.1 mouse_genomes_project 2 135635941 135638018 - Slc23a2 protein_coding processed_transcript MGP_129S1SvImJ_T0057838.1 MGP_129S1SvImJ_G0026538.1 mouse_genomes_project 2 135649117 135654623 - Slc23a2 protein_coding processed_transcript MGP_129S1SvImJ_T0057839.1 MGP_129S1SvImJ_G0026538.1 mouse_genomes_project 2 135654217 135677518 - MGP_129S1SvImJ_P0057839 Slc23a2 protein_coding protein_coding MGP_129S1SvImJ_T0057770.1 MGP_129S1SvImJ_G0026526.1 mouse_genomes_project 2 134699608 134713040 + MGP_129S1SvImJ_P0057770 Cdc25b protein_coding protein_coding MGP_129S1SvImJ_T0057771.1 MGP_129S1SvImJ_G0026526.1 mouse_genomes_project 2 134699617 134713042 + MGP_129S1SvImJ_P0057771 Cdc25b protein_coding protein_coding MGP_129S1SvImJ_T0057772.1 MGP_129S1SvImJ_G0026526.1 mouse_genomes_project 2 134700817 134704585 + Cdc25b protein_coding retained_intron MGP_129S1SvImJ_T0057773.1 MGP_129S1SvImJ_G0026526.1 mouse_genomes_project 2 134704016 134704769 + Cdc25b protein_coding retained_intron MGP_129S1SvImJ_T0057774.1 MGP_129S1SvImJ_G0026526.1 mouse_genomes_project 2 134704409 134707882 + Cdc25b protein_coding retained_intron MGP_129S1SvImJ_T0057775.1 MGP_129S1SvImJ_G0026526.1 mouse_genomes_project 2 134704479 134707769 + Cdc25b protein_coding retained_intron MGP_129S1SvImJ_T0057776.1 MGP_129S1SvImJ_G0026526.1 mouse_genomes_project 2 134707363 134708896 + Cdc25b protein_coding retained_intron MGP_129S1SvImJ_T0057311.1 MGP_129S1SvImJ_G0026418.1 mouse_genomes_project 2 125678199 125681951 + MGP_129S1SvImJ_P0057311 AA467197 protein_coding protein_coding MGP_129S1SvImJ_T0057312.1 MGP_129S1SvImJ_G0026418.1 mouse_genomes_project 2 125679064 125682415 + MGP_129S1SvImJ_P0057312 AA467197 protein_coding protein_coding MGP_129S1SvImJ_T0057313.1 MGP_129S1SvImJ_G0026418.1 mouse_genomes_project 2 125679129 125682165 + AA467197 protein_coding processed_transcript MGP_129S1SvImJ_T0057314.1 MGP_129S1SvImJ_G0026418.1 mouse_genomes_project 2 125679129 125682307 + MGP_129S1SvImJ_P0057314 AA467197 protein_coding protein_coding MGP_129S1SvImJ_T0013867.1 MGP_129S1SvImJ_G0011956.1 mouse_genomes_project 2 166511602 166512052 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058598.1 MGP_129S1SvImJ_G0026740.1 mouse_genomes_project 2 160540184 160567853 - MGP_129S1SvImJ_P0058598 Edem2 protein_coding protein_coding MGP_129S1SvImJ_T0058599.1 MGP_129S1SvImJ_G0026740.1 mouse_genomes_project 2 160544230 160551794 - Edem2 protein_coding processed_transcript MGP_129S1SvImJ_T0058600.1 MGP_129S1SvImJ_G0026740.1 mouse_genomes_project 2 160547064 160549468 - Edem2 protein_coding retained_intron MGP_129S1SvImJ_T0058601.1 MGP_129S1SvImJ_G0026740.1 mouse_genomes_project 2 160547481 160554878 - Edem2 protein_coding retained_intron MGP_129S1SvImJ_T0100980.1 MGP_129S1SvImJ_G0039047.1 mouse_genomes_project 2 155329784 155329928 + Gm23598 snoRNA snoRNA MGP_129S1SvImJ_T0003937.1 MGP_129S1SvImJ_G0003521.1 mouse_genomes_project 2 23516870 23545263 + Fcnaos antisense antisense MGP_129S1SvImJ_T0003938.1 MGP_129S1SvImJ_G0003521.1 mouse_genomes_project 2 23526720 23545263 + Fcnaos antisense antisense MGP_129S1SvImJ_T0003939.1 MGP_129S1SvImJ_G0003521.1 mouse_genomes_project 2 23541091 23545264 + Fcnaos antisense antisense MGP_129S1SvImJ_T0003940.1 MGP_129S1SvImJ_G0003521.1 mouse_genomes_project 2 23544150 23545266 + Fcnaos antisense antisense MGP_129S1SvImJ_T0007396.1 MGP_129S1SvImJ_G0006069.1 mouse_genomes_project 2 171827914 171828984 - Gm11466 lincRNA lincRNA MGP_129S1SvImJ_T0010481.1 MGP_129S1SvImJ_G0008597.1 mouse_genomes_project 2 152368591 152368670 + Gm27420 miRNA miRNA MGP_129S1SvImJ_T0100922.1 MGP_129S1SvImJ_G0038989.1 mouse_genomes_project 2 24882903 24882977 + Gm23969 snoRNA snoRNA MGP_129S1SvImJ_T0055171.1 MGP_129S1SvImJ_G0025808.1 mouse_genomes_project 2 69867901 69887793 - MGP_129S1SvImJ_P0055171 Mettl5 protein_coding protein_coding MGP_129S1SvImJ_T0055172.1 MGP_129S1SvImJ_G0025808.1 mouse_genomes_project 2 69867917 69887775 - MGP_129S1SvImJ_P0055172 Mettl5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055173.1 MGP_129S1SvImJ_G0025808.1 mouse_genomes_project 2 69867921 69873051 - Mettl5 protein_coding retained_intron MGP_129S1SvImJ_T0055174.1 MGP_129S1SvImJ_G0025808.1 mouse_genomes_project 2 69878493 69887782 - Mettl5 protein_coding retained_intron MGP_129S1SvImJ_T0007180.1 MGP_129S1SvImJ_G0005890.1 mouse_genomes_project 2 30992631 30996935 + Gm13412 lincRNA lincRNA MGP_129S1SvImJ_T0054591.1 MGP_129S1SvImJ_G0025708.1 mouse_genomes_project 2 37796876 37800915 - MGP_129S1SvImJ_P0054591 Rpl35 protein_coding protein_coding MGP_129S1SvImJ_T0054592.1 MGP_129S1SvImJ_G0025708.1 mouse_genomes_project 2 37796915 37800334 - Rpl35 protein_coding processed_transcript MGP_129S1SvImJ_T0054593.1 MGP_129S1SvImJ_G0025708.1 mouse_genomes_project 2 37799902 37800413 - Rpl35 protein_coding processed_transcript MGP_129S1SvImJ_T0054717.1 MGP_129S1SvImJ_G0025722.1 mouse_genomes_project 2 48624576 48726397 + MGP_129S1SvImJ_P0054717 Epc2 protein_coding protein_coding MGP_129S1SvImJ_T0054718.1 MGP_129S1SvImJ_G0025722.1 mouse_genomes_project 2 48703332 48711541 + MGP_129S1SvImJ_P0054718 Epc2 protein_coding protein_coding MGP_129S1SvImJ_T0054126.1 MGP_129S1SvImJ_G0025607.1 mouse_genomes_project 2 30874164 30890797 - MGP_129S1SvImJ_P0054126 Slc25a25 protein_coding protein_coding MGP_129S1SvImJ_T0054127.1 MGP_129S1SvImJ_G0025607.1 mouse_genomes_project 2 30874164 30911116 - MGP_129S1SvImJ_P0054127 Slc25a25 protein_coding protein_coding MGP_129S1SvImJ_T0054128.1 MGP_129S1SvImJ_G0025607.1 mouse_genomes_project 2 30874167 30911139 - MGP_129S1SvImJ_P0054128 Slc25a25 protein_coding protein_coding MGP_129S1SvImJ_T0054129.1 MGP_129S1SvImJ_G0025607.1 mouse_genomes_project 2 30874647 30890430 - MGP_129S1SvImJ_P0054129 Slc25a25 protein_coding protein_coding MGP_129S1SvImJ_T0054130.1 MGP_129S1SvImJ_G0025607.1 mouse_genomes_project 2 30874737 30883683 - MGP_129S1SvImJ_P0054130 Slc25a25 protein_coding protein_coding MGP_129S1SvImJ_T0054131.1 MGP_129S1SvImJ_G0025607.1 mouse_genomes_project 2 30875886 30876249 - Slc25a25 protein_coding retained_intron MGP_129S1SvImJ_T0054132.1 MGP_129S1SvImJ_G0025607.1 mouse_genomes_project 2 30876769 30880128 - Slc25a25 protein_coding retained_intron MGP_129S1SvImJ_T0054133.1 MGP_129S1SvImJ_G0025607.1 mouse_genomes_project 2 30876849 30877508 - Slc25a25 protein_coding retained_intron MGP_129S1SvImJ_T0054134.1 MGP_129S1SvImJ_G0025607.1 mouse_genomes_project 2 30877095 30890783 - MGP_129S1SvImJ_P0054134 Slc25a25 protein_coding protein_coding MGP_129S1SvImJ_T0054135.1 MGP_129S1SvImJ_G0025607.1 mouse_genomes_project 2 30878725 30881658 - MGP_129S1SvImJ_P0054135 Slc25a25 protein_coding protein_coding MGP_129S1SvImJ_T0054136.1 MGP_129S1SvImJ_G0025607.1 mouse_genomes_project 2 30878807 30890782 - MGP_129S1SvImJ_P0054136 Slc25a25 protein_coding protein_coding MGP_129S1SvImJ_T0054137.1 MGP_129S1SvImJ_G0025607.1 mouse_genomes_project 2 30887026 30890847 - Slc25a25 protein_coding retained_intron MGP_129S1SvImJ_T0058217.1 MGP_129S1SvImJ_G0026635.1 mouse_genomes_project 2 155487187 155499751 - MGP_129S1SvImJ_P0058217 protein_coding protein_coding MGP_129S1SvImJ_T0058219.1 MGP_129S1SvImJ_G0026635.1 mouse_genomes_project 2 155488266 155499715 - protein_coding processed_transcript MGP_129S1SvImJ_T0013766.1 MGP_129S1SvImJ_G0011855.1 mouse_genomes_project 2 131928215 131928489 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059537.1 MGP_129S1SvImJ_G0026947.1 mouse_genomes_project 2 178645065 178646877 + MGP_129S1SvImJ_P0059537 Fam209 protein_coding protein_coding MGP_129S1SvImJ_T0058348.1 MGP_129S1SvImJ_G0026680.1 mouse_genomes_project 2 157500501 157525119 + MGP_129S1SvImJ_P0058348 Mylk2 protein_coding protein_coding MGP_129S1SvImJ_T0058566.1 MGP_129S1SvImJ_G0026736.1 mouse_genomes_project 2 160343984 160395277 + MGP_129S1SvImJ_P0058566 Acss2 protein_coding protein_coding MGP_129S1SvImJ_T0058567.1 MGP_129S1SvImJ_G0026736.1 mouse_genomes_project 2 160344069 160351285 + Acss2 protein_coding retained_intron MGP_129S1SvImJ_T0058568.1 MGP_129S1SvImJ_G0026736.1 mouse_genomes_project 2 160344093 160419323 + MGP_129S1SvImJ_P0058568 Acss2 protein_coding protein_coding MGP_129S1SvImJ_T0058569.1 MGP_129S1SvImJ_G0026736.1 mouse_genomes_project 2 160344105 160384864 + Acss2 protein_coding retained_intron MGP_129S1SvImJ_T0058570.1 MGP_129S1SvImJ_G0026736.1 mouse_genomes_project 2 160344143 160394611 + MGP_129S1SvImJ_P0058570 Acss2 protein_coding protein_coding MGP_129S1SvImJ_T0058571.1 MGP_129S1SvImJ_G0026736.1 mouse_genomes_project 2 160344143 160394611 + MGP_129S1SvImJ_P0058571 Acss2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058572.1 MGP_129S1SvImJ_G0026736.1 mouse_genomes_project 2 160381696 160382334 + Acss2 protein_coding retained_intron MGP_129S1SvImJ_T0058573.1 MGP_129S1SvImJ_G0026736.1 mouse_genomes_project 2 160381707 160389831 + MGP_129S1SvImJ_P0058573 Acss2 protein_coding protein_coding MGP_129S1SvImJ_T0058578.1 MGP_129S1SvImJ_G0026736.1 mouse_genomes_project 2 160401151 160418865 + Acss2 protein_coding processed_transcript MGP_129S1SvImJ_T0058579.1 MGP_129S1SvImJ_G0026736.1 mouse_genomes_project 2 160406475 160410603 + Acss2 protein_coding retained_intron MGP_129S1SvImJ_T0013837.1 MGP_129S1SvImJ_G0011926.1 mouse_genomes_project 2 157027544 157028027 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100926.1 MGP_129S1SvImJ_G0038993.1 mouse_genomes_project 2 30651856 30651941 + Gm22192 snoRNA snoRNA MGP_129S1SvImJ_T0058312.1 MGP_129S1SvImJ_G0026665.1 mouse_genomes_project 2 157080782 157083971 + MGP_129S1SvImJ_P0058312 Defb28 protein_coding protein_coding MGP_129S1SvImJ_T0055950.1 MGP_129S1SvImJ_G0026124.1 mouse_genomes_project 2 91459733 91486697 - MGP_129S1SvImJ_P0055950 Olfr1271 protein_coding protein_coding MGP_129S1SvImJ_T0055515.1 MGP_129S1SvImJ_G0025876.1 mouse_genomes_project 2 79785374 79787823 + Itga4 protein_coding processed_transcript MGP_129S1SvImJ_T0055516.1 MGP_129S1SvImJ_G0025876.1 mouse_genomes_project 2 79785448 79874887 + MGP_129S1SvImJ_P0055516 Itga4 protein_coding protein_coding MGP_129S1SvImJ_T0055517.1 MGP_129S1SvImJ_G0025876.1 mouse_genomes_project 2 79785520 79806818 + Itga4 protein_coding processed_transcript MGP_129S1SvImJ_T0055518.1 MGP_129S1SvImJ_G0025876.1 mouse_genomes_project 2 79785669 79830025 + Itga4 protein_coding processed_transcript MGP_129S1SvImJ_T0055519.1 MGP_129S1SvImJ_G0025876.1 mouse_genomes_project 2 79785895 79829729 + Itga4 protein_coding processed_transcript MGP_129S1SvImJ_T0007345.1 MGP_129S1SvImJ_G0006024.1 mouse_genomes_project 2 139560808 139561791 - Gm14210 lincRNA lincRNA MGP_129S1SvImJ_T0054093.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30797809 30828310 + MGP_129S1SvImJ_P0054093 Ciz1 protein_coding protein_coding MGP_129S1SvImJ_T0054094.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30812166 30816564 + Ciz1 protein_coding processed_transcript MGP_129S1SvImJ_T0054095.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30812166 30816685 + MGP_129S1SvImJ_P0054095 Ciz1 protein_coding protein_coding MGP_129S1SvImJ_T0054096.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30812217 30819279 + MGP_129S1SvImJ_P0054096 Ciz1 protein_coding protein_coding MGP_129S1SvImJ_T0054097.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30812354 30828316 + MGP_129S1SvImJ_P0054097 Ciz1 protein_coding protein_coding MGP_129S1SvImJ_T0054098.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30812354 30828310 + MGP_129S1SvImJ_P0054098 Ciz1 protein_coding protein_coding MGP_129S1SvImJ_T0054099.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30812509 30830982 + Ciz1 protein_coding retained_intron MGP_129S1SvImJ_T0054100.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30812589 30815008 + Ciz1 protein_coding processed_transcript MGP_129S1SvImJ_T0054101.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30812710 30819480 + MGP_129S1SvImJ_P0054101 Ciz1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054102.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30812912 30814144 + Ciz1 protein_coding retained_intron MGP_129S1SvImJ_T0054103.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30812961 30828316 + MGP_129S1SvImJ_P0054103 Ciz1 protein_coding protein_coding MGP_129S1SvImJ_T0054104.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30812966 30828311 + MGP_129S1SvImJ_P0054104 Ciz1 protein_coding protein_coding MGP_129S1SvImJ_T0054105.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30814501 30816671 + Ciz1 protein_coding retained_intron MGP_129S1SvImJ_T0054106.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30816568 30820450 + MGP_129S1SvImJ_P0054106 Ciz1 protein_coding protein_coding MGP_129S1SvImJ_T0054107.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30816628 30821462 + MGP_129S1SvImJ_P0054107 Ciz1 protein_coding protein_coding MGP_129S1SvImJ_T0054108.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30819218 30820907 + Ciz1 protein_coding processed_transcript MGP_129S1SvImJ_T0054109.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30820065 30825551 + MGP_129S1SvImJ_P0054109 Ciz1 protein_coding protein_coding MGP_129S1SvImJ_T0054110.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30820991 30824569 + Ciz1 protein_coding retained_intron MGP_129S1SvImJ_T0054111.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30821473 30825013 + Ciz1 protein_coding retained_intron MGP_129S1SvImJ_T0054112.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30824221 30828312 + Ciz1 protein_coding retained_intron MGP_129S1SvImJ_T0054113.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30825120 30826403 + Ciz1 protein_coding retained_intron MGP_129S1SvImJ_T0054114.1 MGP_129S1SvImJ_G0025603.1 mouse_genomes_project 2 30825501 30830238 + MGP_129S1SvImJ_P0054114 Ciz1 protein_coding protein_coding MGP_129S1SvImJ_T0059634.1 MGP_129S1SvImJ_G0026974.1 mouse_genomes_project 2 184471541 184472458 - MGP_129S1SvImJ_P0059634 protein_coding protein_coding MGP_129S1SvImJ_T0013611.1 MGP_129S1SvImJ_G0011700.1 mouse_genomes_project 2 74099812 74100076 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055791.1 MGP_129S1SvImJ_G0025997.1 mouse_genomes_project 2 88099517 88100456 - MGP_129S1SvImJ_P0055791 Olfr259 protein_coding protein_coding MGP_129S1SvImJ_T0099678.1 MGP_129S1SvImJ_G0037745.1 mouse_genomes_project 2 74938441 74938548 + Gm22975 snRNA snRNA MGP_129S1SvImJ_T0010432.1 MGP_129S1SvImJ_G0008548.1 mouse_genomes_project 2 61435561 61435645 - Gm22403 miRNA miRNA MGP_129S1SvImJ_T0057894.1 MGP_129S1SvImJ_G0026553.1 mouse_genomes_project 2 138294887 138342956 - MGP_129S1SvImJ_P0057894 Tmx4 protein_coding protein_coding MGP_129S1SvImJ_T0057895.1 MGP_129S1SvImJ_G0026553.1 mouse_genomes_project 2 138299727 138342943 - Tmx4 protein_coding processed_transcript MGP_129S1SvImJ_T0057896.1 MGP_129S1SvImJ_G0026553.1 mouse_genomes_project 2 138336736 138342901 - MGP_129S1SvImJ_P0057896 Tmx4 protein_coding protein_coding MGP_129S1SvImJ_T0010400.1 MGP_129S1SvImJ_G0008516.1 mouse_genomes_project 2 24424505 24424566 - Mir6996 miRNA miRNA MGP_129S1SvImJ_T0055555.1 MGP_129S1SvImJ_G0025884.1 mouse_genomes_project 2 80989564 81029246 - MGP_129S1SvImJ_P0055555 Frzb protein_coding protein_coding MGP_129S1SvImJ_T0055556.1 MGP_129S1SvImJ_G0025884.1 mouse_genomes_project 2 80990708 81017513 - Frzb protein_coding processed_transcript MGP_129S1SvImJ_T0059303.1 MGP_129S1SvImJ_G0026895.1 mouse_genomes_project 2 171055728 171059358 - MGP_129S1SvImJ_P0059303 Trp53rka protein_coding protein_coding MGP_129S1SvImJ_T0013688.1 MGP_129S1SvImJ_G0011777.1 mouse_genomes_project 2 97725541 97725701 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010468.1 MGP_129S1SvImJ_G0008584.1 mouse_genomes_project 2 125004553 125004627 + miRNA miRNA MGP_129S1SvImJ_T0059135.1 MGP_129S1SvImJ_G0026853.1 mouse_genomes_project 2 169903795 169937514 + MGP_129S1SvImJ_P0059135 Gm20458 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0098747.1 MGP_129S1SvImJ_G0036832.1 mouse_genomes_project 2 177414548 177414812 - Gm26489 scaRNA scaRNA MGP_129S1SvImJ_T0013443.1 MGP_129S1SvImJ_G0011532.1 mouse_genomes_project 2 12247131 12248122 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100947.1 MGP_129S1SvImJ_G0039014.1 mouse_genomes_project 2 67295062 67295194 + Gm23328 snoRNA snoRNA MGP_129S1SvImJ_T0055924.1 MGP_129S1SvImJ_G0026107.1 mouse_genomes_project 2 90877419 90878724 - MGP_129S1SvImJ_P0055924 Olfr1251 protein_coding protein_coding MGP_129S1SvImJ_T0013822.1 MGP_129S1SvImJ_G0011911.1 mouse_genomes_project 2 151943018 151943348 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007213.1 MGP_129S1SvImJ_G0005917.1 mouse_genomes_project 2 54852266 54865094 + Gm14033 lincRNA lincRNA MGP_129S1SvImJ_T0007214.1 MGP_129S1SvImJ_G0005917.1 mouse_genomes_project 2 54852291 54878211 + Gm14033 lincRNA lincRNA MGP_129S1SvImJ_T0013815.1 MGP_129S1SvImJ_G0011904.1 mouse_genomes_project 2 150054799 150055422 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007384.1 MGP_129S1SvImJ_G0006057.1 mouse_genomes_project 2 166129903 166131011 - Gm14228 lincRNA lincRNA MGP_129S1SvImJ_T0055202.1 MGP_129S1SvImJ_G0025814.1 mouse_genomes_project 2 70716888 70717749 - MGP_129S1SvImJ_P0055202 Gm26558 protein_coding protein_coding MGP_129S1SvImJ_T0017830.1 MGP_129S1SvImJ_G0015438.1 mouse_genomes_project 2 89786507 89801754 + processed_transcript processed_transcript MGP_129S1SvImJ_T0059396.1 MGP_129S1SvImJ_G0026909.1 mouse_genomes_project 2 172805772 172898922 - MGP_129S1SvImJ_P0059396 Kcnb1 protein_coding protein_coding MGP_129S1SvImJ_T0007295.1 MGP_129S1SvImJ_G0005984.1 mouse_genomes_project 2 108794816 108800865 - Gm14014 lincRNA lincRNA MGP_129S1SvImJ_T0052992.1 MGP_129S1SvImJ_G0025418.1 mouse_genomes_project 2 22904184 22912711 + MGP_129S1SvImJ_P0052992 Nsmf protein_coding protein_coding MGP_129S1SvImJ_T0052993.1 MGP_129S1SvImJ_G0025418.1 mouse_genomes_project 2 22904202 22910392 + MGP_129S1SvImJ_P0052993 Nsmf protein_coding protein_coding MGP_129S1SvImJ_T0052994.1 MGP_129S1SvImJ_G0025418.1 mouse_genomes_project 2 22904208 22912710 + MGP_129S1SvImJ_P0052994 Nsmf protein_coding protein_coding MGP_129S1SvImJ_T0052995.1 MGP_129S1SvImJ_G0025418.1 mouse_genomes_project 2 22904213 22912711 + MGP_129S1SvImJ_P0052995 Nsmf protein_coding protein_coding MGP_129S1SvImJ_T0052996.1 MGP_129S1SvImJ_G0025418.1 mouse_genomes_project 2 22904232 22906705 + Nsmf protein_coding retained_intron MGP_129S1SvImJ_T0052997.1 MGP_129S1SvImJ_G0025418.1 mouse_genomes_project 2 22904236 22904926 + Nsmf protein_coding retained_intron MGP_129S1SvImJ_T0052998.1 MGP_129S1SvImJ_G0025418.1 mouse_genomes_project 2 22904242 22912711 + MGP_129S1SvImJ_P0052998 Nsmf protein_coding protein_coding MGP_129S1SvImJ_T0052999.1 MGP_129S1SvImJ_G0025418.1 mouse_genomes_project 2 22904242 22912711 + MGP_129S1SvImJ_P0052999 Nsmf protein_coding protein_coding MGP_129S1SvImJ_T0053000.1 MGP_129S1SvImJ_G0025418.1 mouse_genomes_project 2 22904254 22908886 + MGP_129S1SvImJ_P0053000 Nsmf protein_coding protein_coding MGP_129S1SvImJ_T0053001.1 MGP_129S1SvImJ_G0025418.1 mouse_genomes_project 2 22904264 22912711 + MGP_129S1SvImJ_P0053001 Nsmf protein_coding protein_coding MGP_129S1SvImJ_T0053002.1 MGP_129S1SvImJ_G0025418.1 mouse_genomes_project 2 22904285 22912711 + MGP_129S1SvImJ_P0053002 Nsmf protein_coding protein_coding MGP_129S1SvImJ_T0053003.1 MGP_129S1SvImJ_G0025418.1 mouse_genomes_project 2 22904297 22912711 + MGP_129S1SvImJ_P0053003 Nsmf protein_coding protein_coding MGP_129S1SvImJ_T0053004.1 MGP_129S1SvImJ_G0025418.1 mouse_genomes_project 2 22904297 22912458 + MGP_129S1SvImJ_P0053004 Nsmf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053005.1 MGP_129S1SvImJ_G0025418.1 mouse_genomes_project 2 22905709 22907177 + Nsmf protein_coding retained_intron MGP_129S1SvImJ_T0053006.1 MGP_129S1SvImJ_G0025418.1 mouse_genomes_project 2 22906976 22912711 + MGP_129S1SvImJ_P0053006 Nsmf protein_coding protein_coding MGP_129S1SvImJ_T0053007.1 MGP_129S1SvImJ_G0025418.1 mouse_genomes_project 2 22907405 22909489 + Nsmf protein_coding retained_intron MGP_129S1SvImJ_T0053008.1 MGP_129S1SvImJ_G0025418.1 mouse_genomes_project 2 22909965 22910937 + Nsmf protein_coding retained_intron MGP_129S1SvImJ_T0053009.1 MGP_129S1SvImJ_G0025418.1 mouse_genomes_project 2 22910658 22911539 + Nsmf protein_coding retained_intron MGP_129S1SvImJ_T0058482.1 MGP_129S1SvImJ_G0026716.1 mouse_genomes_project 2 159299829 159314311 - MGP_129S1SvImJ_P0058482 Necab3 protein_coding protein_coding MGP_129S1SvImJ_T0058483.1 MGP_129S1SvImJ_G0026716.1 mouse_genomes_project 2 159299829 159314326 - MGP_129S1SvImJ_P0058483 Necab3 protein_coding protein_coding MGP_129S1SvImJ_T0058484.1 MGP_129S1SvImJ_G0026716.1 mouse_genomes_project 2 159300475 159302225 - Necab3 protein_coding retained_intron MGP_129S1SvImJ_T0058485.1 MGP_129S1SvImJ_G0026716.1 mouse_genomes_project 2 159302476 159314350 - MGP_129S1SvImJ_P0058485 Necab3 protein_coding protein_coding MGP_129S1SvImJ_T0058487.1 MGP_129S1SvImJ_G0026716.1 mouse_genomes_project 2 159302571 159314304 - Necab3 protein_coding processed_transcript MGP_129S1SvImJ_T0058491.1 MGP_129S1SvImJ_G0026716.1 mouse_genomes_project 2 159309752 159314312 - Necab3 protein_coding retained_intron MGP_129S1SvImJ_T0058492.1 MGP_129S1SvImJ_G0026716.1 mouse_genomes_project 2 159310130 159312739 - Necab3 protein_coding retained_intron MGP_129S1SvImJ_T0013514.1 MGP_129S1SvImJ_G0011603.1 mouse_genomes_project 2 38054046 38054362 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057761.1 MGP_129S1SvImJ_G0026523.1 mouse_genomes_project 2 134657451 134672804 - MGP_129S1SvImJ_P0057761 1700037H04Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057762.1 MGP_129S1SvImJ_G0026523.1 mouse_genomes_project 2 134657452 134660156 - 1700037H04Rik protein_coding retained_intron MGP_129S1SvImJ_T0057763.1 MGP_129S1SvImJ_G0026523.1 mouse_genomes_project 2 134657452 134672790 - MGP_129S1SvImJ_P0057763 1700037H04Rik protein_coding protein_coding MGP_129S1SvImJ_T0057764.1 MGP_129S1SvImJ_G0026523.1 mouse_genomes_project 2 134657921 134672794 - MGP_129S1SvImJ_P0057764 1700037H04Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057765.1 MGP_129S1SvImJ_G0026523.1 mouse_genomes_project 2 134657931 134672851 - MGP_129S1SvImJ_P0057765 1700037H04Rik protein_coding protein_coding MGP_129S1SvImJ_T0057766.1 MGP_129S1SvImJ_G0026523.1 mouse_genomes_project 2 134658288 134672812 - MGP_129S1SvImJ_P0057766 1700037H04Rik protein_coding protein_coding MGP_129S1SvImJ_T0057767.1 MGP_129S1SvImJ_G0026523.1 mouse_genomes_project 2 134659408 134672812 - 1700037H04Rik protein_coding processed_transcript MGP_129S1SvImJ_T0013419.1 MGP_129S1SvImJ_G0011508.1 mouse_genomes_project 2 1096766 1097330 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053021.1 MGP_129S1SvImJ_G0025422.1 mouse_genomes_project 2 23056264 23060185 - MGP_129S1SvImJ_P0053021 Tor4a protein_coding protein_coding MGP_129S1SvImJ_T0053022.1 MGP_129S1SvImJ_G0025422.1 mouse_genomes_project 2 23058355 23060058 - MGP_129S1SvImJ_P0053022 Tor4a protein_coding protein_coding MGP_129S1SvImJ_T0053023.1 MGP_129S1SvImJ_G0025422.1 mouse_genomes_project 2 23059090 23060070 - MGP_129S1SvImJ_P0053023 Tor4a protein_coding protein_coding MGP_129S1SvImJ_T0056885.1 MGP_129S1SvImJ_G0026338.1 mouse_genomes_project 2 121974547 121988865 + MGP_129S1SvImJ_P0056885 Spint1 protein_coding protein_coding MGP_129S1SvImJ_T0056886.1 MGP_129S1SvImJ_G0026338.1 mouse_genomes_project 2 121974662 121988546 + MGP_129S1SvImJ_P0056886 Spint1 protein_coding protein_coding MGP_129S1SvImJ_T0056887.1 MGP_129S1SvImJ_G0026338.1 mouse_genomes_project 2 121974738 121988878 + MGP_129S1SvImJ_P0056887 Spint1 protein_coding protein_coding MGP_129S1SvImJ_T0056888.1 MGP_129S1SvImJ_G0026338.1 mouse_genomes_project 2 121985718 121988253 + Spint1 protein_coding retained_intron MGP_129S1SvImJ_T0056889.1 MGP_129S1SvImJ_G0026338.1 mouse_genomes_project 2 121987555 121988400 + Spint1 protein_coding retained_intron MGP_129S1SvImJ_T0017952.1 MGP_129S1SvImJ_G0015493.1 mouse_genomes_project 2 178098351 178104214 - 1700028P15Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017953.1 MGP_129S1SvImJ_G0015493.1 mouse_genomes_project 2 178099658 178103547 - 1700028P15Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017954.1 MGP_129S1SvImJ_G0015493.1 mouse_genomes_project 2 178099659 178104239 - 1700028P15Rik processed_transcript retained_intron MGP_129S1SvImJ_T0054872.1 MGP_129S1SvImJ_G0025755.1 mouse_genomes_project 2 59021212 59043087 + MGP_129S1SvImJ_P0054872 Dapl1 protein_coding protein_coding MGP_129S1SvImJ_T0054873.1 MGP_129S1SvImJ_G0025755.1 mouse_genomes_project 2 59021228 59043087 + Dapl1 protein_coding processed_transcript MGP_129S1SvImJ_T0010396.1 MGP_129S1SvImJ_G0008512.1 mouse_genomes_project 2 22778219 22778345 + Gm22875 miRNA miRNA MGP_129S1SvImJ_T0003910.1 MGP_129S1SvImJ_G0003497.1 mouse_genomes_project 2 2132512 2136364 + 4930551O13Rik antisense antisense MGP_129S1SvImJ_T0052380.1 MGP_129S1SvImJ_G0025316.1 mouse_genomes_project 2 1954442 1989973 + MGP_129S1SvImJ_P0052380 Sephs1 protein_coding protein_coding MGP_129S1SvImJ_T0052381.1 MGP_129S1SvImJ_G0025316.1 mouse_genomes_project 2 1954953 1987553 + MGP_129S1SvImJ_P0052381 Sephs1 protein_coding protein_coding MGP_129S1SvImJ_T0052382.1 MGP_129S1SvImJ_G0025316.1 mouse_genomes_project 2 1956765 1961925 + Sephs1 protein_coding processed_transcript MGP_129S1SvImJ_T0052383.1 MGP_129S1SvImJ_G0025316.1 mouse_genomes_project 2 1957092 1984949 + Sephs1 protein_coding processed_transcript MGP_129S1SvImJ_T0053677.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28060067 28072018 + MGP_129S1SvImJ_P0053677 Odf2 protein_coding protein_coding MGP_129S1SvImJ_T0053678.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28060080 28063423 + Odf2 protein_coding retained_intron MGP_129S1SvImJ_T0053679.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28060566 28094721 + MGP_129S1SvImJ_P0053679 Odf2 protein_coding protein_coding MGP_129S1SvImJ_T0053680.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28060631 28094721 + MGP_129S1SvImJ_P0053680 Odf2 protein_coding protein_coding MGP_129S1SvImJ_T0053681.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28060641 28103928 + MGP_129S1SvImJ_P0053681 Odf2 protein_coding protein_coding MGP_129S1SvImJ_T0053682.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28060641 28103278 + MGP_129S1SvImJ_P0053682 Odf2 protein_coding protein_coding MGP_129S1SvImJ_T0053683.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28060644 28103278 + MGP_129S1SvImJ_P0053683 Odf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053684.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28060657 28073187 + Odf2 protein_coding processed_transcript MGP_129S1SvImJ_T0053685.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28060661 28073157 + MGP_129S1SvImJ_P0053685 Odf2 protein_coding protein_coding MGP_129S1SvImJ_T0053686.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28060663 28103928 + MGP_129S1SvImJ_P0053686 Odf2 protein_coding protein_coding MGP_129S1SvImJ_T0053687.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28060664 28094721 + MGP_129S1SvImJ_P0053687 Odf2 protein_coding protein_coding MGP_129S1SvImJ_T0053688.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28060671 28072404 + Odf2 protein_coding retained_intron MGP_129S1SvImJ_T0053689.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28060680 28074989 + MGP_129S1SvImJ_P0053689 Odf2 protein_coding protein_coding MGP_129S1SvImJ_T0053690.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28060741 28103929 + MGP_129S1SvImJ_P0053690 Odf2 protein_coding protein_coding MGP_129S1SvImJ_T0053691.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28060909 28094721 + MGP_129S1SvImJ_P0053691 Odf2 protein_coding protein_coding MGP_129S1SvImJ_T0053692.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28060929 28061837 + Odf2 protein_coding processed_transcript MGP_129S1SvImJ_T0053693.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28060989 28094721 + MGP_129S1SvImJ_P0053693 Odf2 protein_coding protein_coding MGP_129S1SvImJ_T0053694.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28061002 28103278 + MGP_129S1SvImJ_P0053694 Odf2 protein_coding protein_coding MGP_129S1SvImJ_T0053695.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28061386 28094718 + MGP_129S1SvImJ_P0053695 Odf2 protein_coding protein_coding MGP_129S1SvImJ_T0053696.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28062842 28072032 + Odf2 protein_coding processed_transcript MGP_129S1SvImJ_T0053697.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28074453 28086564 + Odf2 protein_coding processed_transcript MGP_129S1SvImJ_T0053698.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28074484 28087005 + Odf2 protein_coding processed_transcript MGP_129S1SvImJ_T0053699.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28084318 28086968 + Odf2 protein_coding retained_intron MGP_129S1SvImJ_T0053700.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28086084 28090886 + Odf2 protein_coding retained_intron MGP_129S1SvImJ_T0053701.1 MGP_129S1SvImJ_G0025547.1 mouse_genomes_project 2 28097653 28098927 + Odf2 protein_coding retained_intron MGP_129S1SvImJ_T0007414.1 MGP_129S1SvImJ_G0006083.1 mouse_genomes_project 2 174128657 174134763 - Gm14262 lincRNA lincRNA MGP_129S1SvImJ_T0007438.1 MGP_129S1SvImJ_G0006104.1 mouse_genomes_project 2 181243018 181253205 + Gm14616 lincRNA lincRNA MGP_129S1SvImJ_T0057662.1 MGP_129S1SvImJ_G0026501.1 mouse_genomes_project 2 133863968 133866995 + MGP_129S1SvImJ_P0057662 Gm28372 protein_coding protein_coding MGP_129S1SvImJ_T0001114.1 MGP_129S1SvImJ_G0001043.1 mouse_genomes_project 2 118644228 118645164 - TEC TEC MGP_129S1SvImJ_T0010495.1 MGP_129S1SvImJ_G0008611.1 mouse_genomes_project 2 173874997 173875075 - Gm24327 miRNA miRNA MGP_129S1SvImJ_T0007351.1 MGP_129S1SvImJ_G0006030.1 mouse_genomes_project 2 148231644 148247539 - lincRNA lincRNA MGP_129S1SvImJ_T0007352.1 MGP_129S1SvImJ_G0006030.1 mouse_genomes_project 2 148232826 148237302 - lincRNA lincRNA MGP_129S1SvImJ_T0102383.1 MGP_129S1SvImJ_G0040217.1 mouse_genomes_project 2 34974046 34974952 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0057477.1 MGP_129S1SvImJ_G0026454.1 mouse_genomes_project 2 130525153 130538379 + MGP_129S1SvImJ_P0057477 Tmem127 protein_coding protein_coding MGP_129S1SvImJ_T0057478.1 MGP_129S1SvImJ_G0026454.1 mouse_genomes_project 2 130525214 130534421 + MGP_129S1SvImJ_P0057478 Tmem127 protein_coding protein_coding MGP_129S1SvImJ_T0057479.1 MGP_129S1SvImJ_G0026454.1 mouse_genomes_project 2 130525218 130534793 + MGP_129S1SvImJ_P0057479 Tmem127 protein_coding protein_coding MGP_129S1SvImJ_T0001109.1 MGP_129S1SvImJ_G0001038.1 mouse_genomes_project 2 70572675 70573401 - TEC TEC MGP_129S1SvImJ_T0007145.1 MGP_129S1SvImJ_G0005864.1 mouse_genomes_project 2 6899310 6907328 - Gm13218 lincRNA lincRNA MGP_129S1SvImJ_T0055226.1 MGP_129S1SvImJ_G0025818.1 mouse_genomes_project 2 71130149 71160998 + MGP_129S1SvImJ_P0055226 Dcaf17 protein_coding protein_coding MGP_129S1SvImJ_T0055227.1 MGP_129S1SvImJ_G0025818.1 mouse_genomes_project 2 71130579 71152659 + MGP_129S1SvImJ_P0055227 Dcaf17 protein_coding protein_coding MGP_129S1SvImJ_T0055228.1 MGP_129S1SvImJ_G0025818.1 mouse_genomes_project 2 71130667 71164670 + MGP_129S1SvImJ_P0055228 Dcaf17 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055229.1 MGP_129S1SvImJ_G0025818.1 mouse_genomes_project 2 71130673 71163036 + MGP_129S1SvImJ_P0055229 Dcaf17 protein_coding protein_coding MGP_129S1SvImJ_T0055230.1 MGP_129S1SvImJ_G0025818.1 mouse_genomes_project 2 71130815 71164321 + MGP_129S1SvImJ_P0055230 Dcaf17 protein_coding protein_coding MGP_129S1SvImJ_T0055231.1 MGP_129S1SvImJ_G0025818.1 mouse_genomes_project 2 71149838 71156409 + Dcaf17 protein_coding processed_transcript MGP_129S1SvImJ_T0056738.1 MGP_129S1SvImJ_G0026306.1 mouse_genomes_project 2 118427437 118632735 - MGP_129S1SvImJ_P0056738 Meis2 protein_coding protein_coding MGP_129S1SvImJ_T0056739.1 MGP_129S1SvImJ_G0026306.1 mouse_genomes_project 2 118427437 118633533 - MGP_129S1SvImJ_P0056739 Meis2 protein_coding protein_coding MGP_129S1SvImJ_T0056740.1 MGP_129S1SvImJ_G0026306.1 mouse_genomes_project 2 118427437 118633533 - MGP_129S1SvImJ_P0056740 Meis2 protein_coding protein_coding MGP_129S1SvImJ_T0056741.1 MGP_129S1SvImJ_G0026306.1 mouse_genomes_project 2 118427437 118632735 - MGP_129S1SvImJ_P0056741 Meis2 protein_coding protein_coding MGP_129S1SvImJ_T0056742.1 MGP_129S1SvImJ_G0026306.1 mouse_genomes_project 2 118427518 118632409 - MGP_129S1SvImJ_P0056742 Meis2 protein_coding protein_coding MGP_129S1SvImJ_T0056743.1 MGP_129S1SvImJ_G0026306.1 mouse_genomes_project 2 118427674 118632193 - MGP_129S1SvImJ_P0056743 Meis2 protein_coding protein_coding MGP_129S1SvImJ_T0056744.1 MGP_129S1SvImJ_G0026306.1 mouse_genomes_project 2 118428279 118437326 - Meis2 protein_coding processed_transcript MGP_129S1SvImJ_T0056745.1 MGP_129S1SvImJ_G0026306.1 mouse_genomes_project 2 118428602 118433240 - Meis2 protein_coding retained_intron MGP_129S1SvImJ_T0056746.1 MGP_129S1SvImJ_G0026306.1 mouse_genomes_project 2 118428648 118609871 - Meis2 protein_coding processed_transcript MGP_129S1SvImJ_T0056747.1 MGP_129S1SvImJ_G0026306.1 mouse_genomes_project 2 118428693 118437237 - Meis2 protein_coding processed_transcript MGP_129S1SvImJ_T0056748.1 MGP_129S1SvImJ_G0026306.1 mouse_genomes_project 2 118428834 118437326 - Meis2 protein_coding processed_transcript MGP_129S1SvImJ_T0056749.1 MGP_129S1SvImJ_G0026306.1 mouse_genomes_project 2 118429242 118437345 - Meis2 protein_coding retained_intron MGP_129S1SvImJ_T0056750.1 MGP_129S1SvImJ_G0026306.1 mouse_genomes_project 2 118431248 118437329 - Meis2 protein_coding processed_transcript MGP_129S1SvImJ_T0056751.1 MGP_129S1SvImJ_G0026306.1 mouse_genomes_project 2 118488802 118617506 - Meis2 protein_coding processed_transcript MGP_129S1SvImJ_T0056752.1 MGP_129S1SvImJ_G0026306.1 mouse_genomes_project 2 118564265 118630200 - Meis2 protein_coding retained_intron MGP_129S1SvImJ_T0056753.1 MGP_129S1SvImJ_G0026306.1 mouse_genomes_project 2 118606600 118617038 - Meis2 protein_coding retained_intron MGP_129S1SvImJ_T0056754.1 MGP_129S1SvImJ_G0026306.1 mouse_genomes_project 2 118616909 118631260 - Meis2 protein_coding processed_transcript MGP_129S1SvImJ_T0056755.1 MGP_129S1SvImJ_G0026306.1 mouse_genomes_project 2 118616909 118630370 - Meis2 protein_coding processed_transcript MGP_129S1SvImJ_T0056756.1 MGP_129S1SvImJ_G0026306.1 mouse_genomes_project 2 118616932 118626674 - Meis2 protein_coding retained_intron MGP_129S1SvImJ_T0100914.1 MGP_129S1SvImJ_G0038981.1 mouse_genomes_project 2 8386476 8386605 - Gm23877 snoRNA snoRNA MGP_129S1SvImJ_T0013591.1 MGP_129S1SvImJ_G0011680.1 mouse_genomes_project 2 66725946 66728386 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056815.1 MGP_129S1SvImJ_G0026322.1 mouse_genomes_project 2 121477115 121482348 + MGP_129S1SvImJ_P0056815 Phgr1 protein_coding protein_coding MGP_129S1SvImJ_T0056816.1 MGP_129S1SvImJ_G0026322.1 mouse_genomes_project 2 121477115 121482349 + MGP_129S1SvImJ_P0056816 Phgr1 protein_coding protein_coding MGP_129S1SvImJ_T0059354.1 MGP_129S1SvImJ_G0026903.1 mouse_genomes_project 2 172488524 172581367 + MGP_129S1SvImJ_P0059354 Arfgef2 protein_coding protein_coding MGP_129S1SvImJ_T0059355.1 MGP_129S1SvImJ_G0026903.1 mouse_genomes_project 2 172505787 172531640 + MGP_129S1SvImJ_P0059355 Arfgef2 protein_coding protein_coding MGP_129S1SvImJ_T0054744.1 MGP_129S1SvImJ_G0025728.1 mouse_genomes_project 2 50902774 50903672 + MGP_129S1SvImJ_P0054744 Tas2r134 protein_coding protein_coding MGP_129S1SvImJ_T0055602.1 MGP_129S1SvImJ_G0025898.1 mouse_genomes_project 2 84993750 85103173 - MGP_129S1SvImJ_P0055602 Calcrl protein_coding protein_coding MGP_129S1SvImJ_T0055603.1 MGP_129S1SvImJ_G0025898.1 mouse_genomes_project 2 84993783 85048066 - MGP_129S1SvImJ_P0055603 Calcrl protein_coding protein_coding MGP_129S1SvImJ_T0055604.1 MGP_129S1SvImJ_G0025898.1 mouse_genomes_project 2 85048002 85103028 - Calcrl protein_coding processed_transcript MGP_129S1SvImJ_T0057667.1 MGP_129S1SvImJ_G0026504.1 mouse_genomes_project 2 133877249 133884251 - Pced1a protein_coding processed_transcript MGP_129S1SvImJ_T0057668.1 MGP_129S1SvImJ_G0026504.1 mouse_genomes_project 2 133877684 133884281 - MGP_129S1SvImJ_P0057668 Pced1a protein_coding protein_coding MGP_129S1SvImJ_T0057669.1 MGP_129S1SvImJ_G0026504.1 mouse_genomes_project 2 133878207 133884284 - Pced1a protein_coding processed_transcript MGP_129S1SvImJ_T0057670.1 MGP_129S1SvImJ_G0026504.1 mouse_genomes_project 2 133878231 133884269 - Pced1a protein_coding retained_intron MGP_129S1SvImJ_T0057671.1 MGP_129S1SvImJ_G0026504.1 mouse_genomes_project 2 133878960 133884690 - MGP_129S1SvImJ_P0057671 Pced1a protein_coding protein_coding MGP_129S1SvImJ_T0057672.1 MGP_129S1SvImJ_G0026504.1 mouse_genomes_project 2 133878971 133884704 - Pced1a protein_coding retained_intron MGP_129S1SvImJ_T0057673.1 MGP_129S1SvImJ_G0026504.1 mouse_genomes_project 2 133881891 133884313 - Pced1a protein_coding retained_intron MGP_129S1SvImJ_T0007222.1 MGP_129S1SvImJ_G0005925.1 mouse_genomes_project 2 65962974 66020316 + Gm28638 lincRNA lincRNA MGP_129S1SvImJ_T0053842.1 MGP_129S1SvImJ_G0025568.1 mouse_genomes_project 2 28625432 28642158 - MGP_129S1SvImJ_P0053842 Crat protein_coding protein_coding MGP_129S1SvImJ_T0053843.1 MGP_129S1SvImJ_G0025568.1 mouse_genomes_project 2 28625437 28631646 - Crat protein_coding processed_transcript MGP_129S1SvImJ_T0053844.1 MGP_129S1SvImJ_G0025568.1 mouse_genomes_project 2 28626062 28642200 - MGP_129S1SvImJ_P0053844 Crat protein_coding protein_coding MGP_129S1SvImJ_T0053845.1 MGP_129S1SvImJ_G0025568.1 mouse_genomes_project 2 28627459 28630254 - MGP_129S1SvImJ_P0053845 Crat protein_coding protein_coding MGP_129S1SvImJ_T0053846.1 MGP_129S1SvImJ_G0025568.1 mouse_genomes_project 2 28627539 28641911 - MGP_129S1SvImJ_P0053846 Crat protein_coding protein_coding MGP_129S1SvImJ_T0053847.1 MGP_129S1SvImJ_G0025568.1 mouse_genomes_project 2 28627598 28629927 - MGP_129S1SvImJ_P0053847 Crat protein_coding protein_coding MGP_129S1SvImJ_T0053848.1 MGP_129S1SvImJ_G0025568.1 mouse_genomes_project 2 28633041 28641695 - MGP_129S1SvImJ_P0053848 Crat protein_coding protein_coding MGP_129S1SvImJ_T0053849.1 MGP_129S1SvImJ_G0025568.1 mouse_genomes_project 2 28633086 28641935 - MGP_129S1SvImJ_P0053849 Crat protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053850.1 MGP_129S1SvImJ_G0025568.1 mouse_genomes_project 2 28638006 28640726 - Crat protein_coding processed_transcript MGP_129S1SvImJ_T0053851.1 MGP_129S1SvImJ_G0025568.1 mouse_genomes_project 2 28638102 28641905 - MGP_129S1SvImJ_P0053851 Crat protein_coding protein_coding MGP_129S1SvImJ_T0053852.1 MGP_129S1SvImJ_G0025568.1 mouse_genomes_project 2 28638123 28641720 - MGP_129S1SvImJ_P0053852 Crat protein_coding protein_coding MGP_129S1SvImJ_T0053853.1 MGP_129S1SvImJ_G0025568.1 mouse_genomes_project 2 28640446 28641987 - Crat protein_coding processed_transcript MGP_129S1SvImJ_T0053854.1 MGP_129S1SvImJ_G0025568.1 mouse_genomes_project 2 28640981 28641794 - MGP_129S1SvImJ_P0053854 Crat protein_coding protein_coding MGP_129S1SvImJ_T0054225.1 MGP_129S1SvImJ_G0025624.1 mouse_genomes_project 2 31270869 31277917 - MGP_129S1SvImJ_P0054225 Cfap157 protein_coding protein_coding MGP_129S1SvImJ_T0054226.1 MGP_129S1SvImJ_G0025624.1 mouse_genomes_project 2 31271703 31272635 - Cfap157 protein_coding retained_intron MGP_129S1SvImJ_T0055929.1 MGP_129S1SvImJ_G0026111.1 mouse_genomes_project 2 91011429 91012467 + MGP_129S1SvImJ_P0055929 Olfr1255 protein_coding protein_coding MGP_129S1SvImJ_T0010453.1 MGP_129S1SvImJ_G0008569.1 mouse_genomes_project 2 95780209 95780299 - Mir129-2 miRNA miRNA MGP_129S1SvImJ_T0057970.1 MGP_129S1SvImJ_G0026570.1 mouse_genomes_project 2 144159215 144323089 - MGP_129S1SvImJ_P0057970 Sel1l2 protein_coding protein_coding MGP_129S1SvImJ_T0057971.1 MGP_129S1SvImJ_G0026570.1 mouse_genomes_project 2 144226924 144230410 - Sel1l2 protein_coding processed_transcript MGP_129S1SvImJ_T0057972.1 MGP_129S1SvImJ_G0026570.1 mouse_genomes_project 2 144226929 144323091 - MGP_129S1SvImJ_P0057972 Sel1l2 protein_coding protein_coding MGP_129S1SvImJ_T0053772.1 MGP_129S1SvImJ_G0025558.1 mouse_genomes_project 2 28406301 28427481 - MGP_129S1SvImJ_P0053772 Kyat1 protein_coding protein_coding MGP_129S1SvImJ_T0053773.1 MGP_129S1SvImJ_G0025558.1 mouse_genomes_project 2 28406303 28427450 - Kyat1 protein_coding processed_transcript MGP_129S1SvImJ_T0053774.1 MGP_129S1SvImJ_G0025558.1 mouse_genomes_project 2 28406303 28427409 - MGP_129S1SvImJ_P0053774 Kyat1 protein_coding protein_coding MGP_129S1SvImJ_T0053775.1 MGP_129S1SvImJ_G0025558.1 mouse_genomes_project 2 28406308 28419462 - MGP_129S1SvImJ_P0053775 Kyat1 protein_coding protein_coding MGP_129S1SvImJ_T0053776.1 MGP_129S1SvImJ_G0025558.1 mouse_genomes_project 2 28406308 28427435 - MGP_129S1SvImJ_P0053776 Kyat1 protein_coding protein_coding MGP_129S1SvImJ_T0053777.1 MGP_129S1SvImJ_G0025558.1 mouse_genomes_project 2 28406445 28415282 - MGP_129S1SvImJ_P0053777 Kyat1 protein_coding protein_coding MGP_129S1SvImJ_T0053778.1 MGP_129S1SvImJ_G0025558.1 mouse_genomes_project 2 28406445 28415282 - MGP_129S1SvImJ_P0053778 Kyat1 protein_coding protein_coding MGP_129S1SvImJ_T0053779.1 MGP_129S1SvImJ_G0025558.1 mouse_genomes_project 2 28412299 28427423 - Kyat1 protein_coding processed_transcript MGP_129S1SvImJ_T0007315.1 MGP_129S1SvImJ_G0005999.1 mouse_genomes_project 2 120060855 120064191 - Gm13982 lincRNA lincRNA MGP_129S1SvImJ_T0013680.1 MGP_129S1SvImJ_G0011769.1 mouse_genomes_project 2 94348383 94348806 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053254.1 MGP_129S1SvImJ_G0025471.1 mouse_genomes_project 2 23718643 23740439 - MGP_129S1SvImJ_P0053254 Glt6d1 protein_coding protein_coding MGP_129S1SvImJ_T0053255.1 MGP_129S1SvImJ_G0025471.1 mouse_genomes_project 2 23719998 23740422 - Glt6d1 protein_coding processed_transcript MGP_129S1SvImJ_T0007150.1 MGP_129S1SvImJ_G0005869.1 mouse_genomes_project 2 8774816 8776878 + Gm13291 lincRNA lincRNA MGP_129S1SvImJ_T0013802.1 MGP_129S1SvImJ_G0011891.1 mouse_genomes_project 2 147160921 147161722 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057741.1 MGP_129S1SvImJ_G0026519.1 mouse_genomes_project 2 134553504 134556950 - Adam33 protein_coding retained_intron MGP_129S1SvImJ_T0057742.1 MGP_129S1SvImJ_G0026519.1 mouse_genomes_project 2 134553730 134568550 - MGP_129S1SvImJ_P0057742 Adam33 protein_coding protein_coding MGP_129S1SvImJ_T0057743.1 MGP_129S1SvImJ_G0026519.1 mouse_genomes_project 2 134553738 134568305 - Adam33 protein_coding retained_intron MGP_129S1SvImJ_T0057744.1 MGP_129S1SvImJ_G0026519.1 mouse_genomes_project 2 134553776 134559277 - MGP_129S1SvImJ_P0057744 Adam33 protein_coding protein_coding MGP_129S1SvImJ_T0057745.1 MGP_129S1SvImJ_G0026519.1 mouse_genomes_project 2 134553788 134568281 - MGP_129S1SvImJ_P0057745 Adam33 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057746.1 MGP_129S1SvImJ_G0026519.1 mouse_genomes_project 2 134554022 134568550 - MGP_129S1SvImJ_P0057746 Adam33 protein_coding protein_coding MGP_129S1SvImJ_T0057747.1 MGP_129S1SvImJ_G0026519.1 mouse_genomes_project 2 134554023 134559391 - Adam33 protein_coding retained_intron MGP_129S1SvImJ_T0057748.1 MGP_129S1SvImJ_G0026519.1 mouse_genomes_project 2 134555955 134557440 - MGP_129S1SvImJ_P0057748 Adam33 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057749.1 MGP_129S1SvImJ_G0026519.1 mouse_genomes_project 2 134556003 134557430 - Adam33 protein_coding processed_transcript MGP_129S1SvImJ_T0057750.1 MGP_129S1SvImJ_G0026519.1 mouse_genomes_project 2 134556134 134556973 - Adam33 protein_coding processed_transcript MGP_129S1SvImJ_T0057751.1 MGP_129S1SvImJ_G0026519.1 mouse_genomes_project 2 134556435 134557443 - Adam33 protein_coding retained_intron MGP_129S1SvImJ_T0057752.1 MGP_129S1SvImJ_G0026519.1 mouse_genomes_project 2 134560465 134568249 - MGP_129S1SvImJ_P0057752 Adam33 protein_coding protein_coding MGP_129S1SvImJ_T0057753.1 MGP_129S1SvImJ_G0026519.1 mouse_genomes_project 2 134564984 134568279 - Adam33 protein_coding retained_intron MGP_129S1SvImJ_T0059428.1 MGP_129S1SvImJ_G0026917.1 mouse_genomes_project 2 173398756 173421760 - MGP_129S1SvImJ_P0059428 protein_coding protein_coding MGP_129S1SvImJ_T0059429.1 MGP_129S1SvImJ_G0026917.1 mouse_genomes_project 2 173399389 173459994 - protein_coding processed_transcript MGP_129S1SvImJ_T0059430.1 MGP_129S1SvImJ_G0026917.1 mouse_genomes_project 2 173399897 173401349 - protein_coding retained_intron MGP_129S1SvImJ_T0059431.1 MGP_129S1SvImJ_G0026917.1 mouse_genomes_project 2 173414390 173421758 - protein_coding retained_intron MGP_129S1SvImJ_T0057152.1 MGP_129S1SvImJ_G0026385.1 mouse_genomes_project 2 124077994 124096598 - Trp53bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0057153.1 MGP_129S1SvImJ_G0026385.1 mouse_genomes_project 2 124079552 124157822 - MGP_129S1SvImJ_P0057153 Trp53bp1 protein_coding protein_coding MGP_129S1SvImJ_T0057154.1 MGP_129S1SvImJ_G0026385.1 mouse_genomes_project 2 124079552 124157756 - MGP_129S1SvImJ_P0057154 Trp53bp1 protein_coding protein_coding MGP_129S1SvImJ_T0057155.1 MGP_129S1SvImJ_G0026385.1 mouse_genomes_project 2 124082960 124120307 - MGP_129S1SvImJ_P0057155 Trp53bp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057156.1 MGP_129S1SvImJ_G0026385.1 mouse_genomes_project 2 124084348 124089617 - Trp53bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0057157.1 MGP_129S1SvImJ_G0026385.1 mouse_genomes_project 2 124087336 124092383 - MGP_129S1SvImJ_P0057157 Trp53bp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057158.1 MGP_129S1SvImJ_G0026385.1 mouse_genomes_project 2 124089716 124093199 - Trp53bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0057159.1 MGP_129S1SvImJ_G0026385.1 mouse_genomes_project 2 124093044 124105822 - MGP_129S1SvImJ_P0057159 Trp53bp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057160.1 MGP_129S1SvImJ_G0026385.1 mouse_genomes_project 2 124093469 124105813 - Trp53bp1 protein_coding retained_intron MGP_129S1SvImJ_T0057161.1 MGP_129S1SvImJ_G0026385.1 mouse_genomes_project 2 124095924 124103032 - Trp53bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0057162.1 MGP_129S1SvImJ_G0026385.1 mouse_genomes_project 2 124100519 124105960 - Trp53bp1 protein_coding retained_intron MGP_129S1SvImJ_T0057163.1 MGP_129S1SvImJ_G0026385.1 mouse_genomes_project 2 124100755 124157736 - MGP_129S1SvImJ_P0057163 Trp53bp1 protein_coding protein_coding MGP_129S1SvImJ_T0057164.1 MGP_129S1SvImJ_G0026385.1 mouse_genomes_project 2 124112717 124119990 - MGP_129S1SvImJ_P0057164 Trp53bp1 protein_coding protein_coding MGP_129S1SvImJ_T0057165.1 MGP_129S1SvImJ_G0026385.1 mouse_genomes_project 2 124116392 124120122 - Trp53bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0057166.1 MGP_129S1SvImJ_G0026385.1 mouse_genomes_project 2 124121124 124137162 - MGP_129S1SvImJ_P0057166 Trp53bp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057167.1 MGP_129S1SvImJ_G0026385.1 mouse_genomes_project 2 124141645 124157784 - Trp53bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0057168.1 MGP_129S1SvImJ_G0026385.1 mouse_genomes_project 2 124144930 124156701 - Trp53bp1 protein_coding retained_intron MGP_129S1SvImJ_T0057169.1 MGP_129S1SvImJ_G0026385.1 mouse_genomes_project 2 124153727 124157776 - Trp53bp1 protein_coding retained_intron MGP_129S1SvImJ_T0057170.1 MGP_129S1SvImJ_G0026385.1 mouse_genomes_project 2 124156044 124157785 - Trp53bp1 protein_coding retained_intron MGP_129S1SvImJ_T0013671.1 MGP_129S1SvImJ_G0011760.1 mouse_genomes_project 2 91354716 91355186 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059169.1 MGP_129S1SvImJ_G0026866.1 mouse_genomes_project 2 170169181 170172387 + MGP_129S1SvImJ_P0059169 Wfdc13 protein_coding protein_coding MGP_129S1SvImJ_T0013553.1 MGP_129S1SvImJ_G0011642.1 mouse_genomes_project 2 53712562 53714037 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001091.1 MGP_129S1SvImJ_G0001020.1 mouse_genomes_project 2 34936567 34938591 - TEC TEC MGP_129S1SvImJ_T0055766.1 MGP_129S1SvImJ_G0025974.1 mouse_genomes_project 2 87399896 87400865 - MGP_129S1SvImJ_P0055766 Olfr228 protein_coding protein_coding MGP_129S1SvImJ_T0013702.1 MGP_129S1SvImJ_G0011791.1 mouse_genomes_project 2 104216052 104216346 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054065.1 MGP_129S1SvImJ_G0025601.1 mouse_genomes_project 2 30732591 30742970 + MGP_129S1SvImJ_P0054065 Golga2 protein_coding protein_coding MGP_129S1SvImJ_T0054066.1 MGP_129S1SvImJ_G0025601.1 mouse_genomes_project 2 30733460 30753187 + MGP_129S1SvImJ_P0054066 Golga2 protein_coding protein_coding MGP_129S1SvImJ_T0054067.1 MGP_129S1SvImJ_G0025601.1 mouse_genomes_project 2 30733520 30753178 + MGP_129S1SvImJ_P0054067 Golga2 protein_coding protein_coding MGP_129S1SvImJ_T0054068.1 MGP_129S1SvImJ_G0025601.1 mouse_genomes_project 2 30733533 30742447 + Golga2 protein_coding retained_intron MGP_129S1SvImJ_T0054069.1 MGP_129S1SvImJ_G0025601.1 mouse_genomes_project 2 30733540 30748225 + MGP_129S1SvImJ_P0054069 Golga2 protein_coding protein_coding MGP_129S1SvImJ_T0054070.1 MGP_129S1SvImJ_G0025601.1 mouse_genomes_project 2 30733553 30753179 + MGP_129S1SvImJ_P0054070 Golga2 protein_coding protein_coding MGP_129S1SvImJ_T0054071.1 MGP_129S1SvImJ_G0025601.1 mouse_genomes_project 2 30733558 30744504 + MGP_129S1SvImJ_P0054071 Golga2 protein_coding protein_coding MGP_129S1SvImJ_T0054072.1 MGP_129S1SvImJ_G0025601.1 mouse_genomes_project 2 30733562 30747466 + MGP_129S1SvImJ_P0054072 Golga2 protein_coding protein_coding MGP_129S1SvImJ_T0054073.1 MGP_129S1SvImJ_G0025601.1 mouse_genomes_project 2 30742273 30753176 + Golga2 protein_coding retained_intron MGP_129S1SvImJ_T0054074.1 MGP_129S1SvImJ_G0025601.1 mouse_genomes_project 2 30743982 30744465 + Golga2 protein_coding retained_intron MGP_129S1SvImJ_T0054075.1 MGP_129S1SvImJ_G0025601.1 mouse_genomes_project 2 30746447 30748215 + Golga2 protein_coding retained_intron MGP_129S1SvImJ_T0059786.1 MGP_129S1SvImJ_G0027009.1 mouse_genomes_project 2 187588405 187609108 - MGP_129S1SvImJ_P0059786 Chrna4 protein_coding protein_coding MGP_129S1SvImJ_T0059787.1 MGP_129S1SvImJ_G0027009.1 mouse_genomes_project 2 187588406 187598356 - MGP_129S1SvImJ_P0059787 Chrna4 protein_coding protein_coding MGP_129S1SvImJ_T0059788.1 MGP_129S1SvImJ_G0027009.1 mouse_genomes_project 2 187592338 187609338 - MGP_129S1SvImJ_P0059788 Chrna4 protein_coding protein_coding MGP_129S1SvImJ_T0059789.1 MGP_129S1SvImJ_G0027009.1 mouse_genomes_project 2 187599452 187609258 - Chrna4 protein_coding processed_transcript MGP_129S1SvImJ_T0059790.1 MGP_129S1SvImJ_G0027009.1 mouse_genomes_project 2 187604051 187613579 - MGP_129S1SvImJ_P0059790 Chrna4 protein_coding protein_coding MGP_129S1SvImJ_T0007363.1 MGP_129S1SvImJ_G0006039.1 mouse_genomes_project 2 155171146 155171784 - Gm28450 lincRNA lincRNA MGP_129S1SvImJ_T0013663.1 MGP_129S1SvImJ_G0011752.1 mouse_genomes_project 2 88607146 88607439 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059746.1 MGP_129S1SvImJ_G0027001.1 mouse_genomes_project 2 187249079 187256756 + MGP_129S1SvImJ_P0059746 Gid8 protein_coding protein_coding MGP_129S1SvImJ_T0059747.1 MGP_129S1SvImJ_G0027001.1 mouse_genomes_project 2 187250649 187253702 + Gid8 protein_coding processed_transcript MGP_129S1SvImJ_T0059748.1 MGP_129S1SvImJ_G0027001.1 mouse_genomes_project 2 187251508 187256753 + MGP_129S1SvImJ_P0059748 Gid8 protein_coding protein_coding MGP_129S1SvImJ_T0057138.1 MGP_129S1SvImJ_G0026384.1 mouse_genomes_project 2 124055147 124069442 + Tubgcp4 protein_coding processed_transcript MGP_129S1SvImJ_T0057139.1 MGP_129S1SvImJ_G0026384.1 mouse_genomes_project 2 124055661 124083480 + MGP_129S1SvImJ_P0057139 Tubgcp4 protein_coding protein_coding MGP_129S1SvImJ_T0057140.1 MGP_129S1SvImJ_G0026384.1 mouse_genomes_project 2 124055702 124083479 + MGP_129S1SvImJ_P0057140 Tubgcp4 protein_coding protein_coding MGP_129S1SvImJ_T0057141.1 MGP_129S1SvImJ_G0026384.1 mouse_genomes_project 2 124055708 124083480 + MGP_129S1SvImJ_P0057141 Tubgcp4 protein_coding protein_coding MGP_129S1SvImJ_T0057142.1 MGP_129S1SvImJ_G0026384.1 mouse_genomes_project 2 124055733 124083479 + Tubgcp4 protein_coding retained_intron MGP_129S1SvImJ_T0057143.1 MGP_129S1SvImJ_G0026384.1 mouse_genomes_project 2 124055739 124060942 + Tubgcp4 protein_coding processed_transcript MGP_129S1SvImJ_T0057144.1 MGP_129S1SvImJ_G0026384.1 mouse_genomes_project 2 124055761 124078926 + MGP_129S1SvImJ_P0057144 Tubgcp4 protein_coding protein_coding MGP_129S1SvImJ_T0057145.1 MGP_129S1SvImJ_G0026384.1 mouse_genomes_project 2 124055786 124069485 + Tubgcp4 protein_coding processed_transcript MGP_129S1SvImJ_T0057146.1 MGP_129S1SvImJ_G0026384.1 mouse_genomes_project 2 124056075 124071726 + Tubgcp4 protein_coding retained_intron MGP_129S1SvImJ_T0057147.1 MGP_129S1SvImJ_G0026384.1 mouse_genomes_project 2 124058685 124069488 + Tubgcp4 protein_coding processed_transcript MGP_129S1SvImJ_T0057148.1 MGP_129S1SvImJ_G0026384.1 mouse_genomes_project 2 124068624 124069815 + Tubgcp4 protein_coding retained_intron MGP_129S1SvImJ_T0057149.1 MGP_129S1SvImJ_G0026384.1 mouse_genomes_project 2 124072360 124081759 + Tubgcp4 protein_coding retained_intron MGP_129S1SvImJ_T0057150.1 MGP_129S1SvImJ_G0026384.1 mouse_genomes_project 2 124073106 124077418 + Tubgcp4 protein_coding retained_intron MGP_129S1SvImJ_T0057151.1 MGP_129S1SvImJ_G0026384.1 mouse_genomes_project 2 124076951 124080941 + Tubgcp4 protein_coding retained_intron MGP_129S1SvImJ_T0055753.1 MGP_129S1SvImJ_G0025961.1 mouse_genomes_project 2 87066036 87066996 - MGP_129S1SvImJ_P0055753 Olfr1047 protein_coding protein_coding MGP_129S1SvImJ_T0100981.1 MGP_129S1SvImJ_G0039048.1 mouse_genomes_project 2 155515030 155515159 + Gm22187 snoRNA snoRNA MGP_129S1SvImJ_T0054625.1 MGP_129S1SvImJ_G0025714.1 mouse_genomes_project 2 39426915 39449833 - Lrp1b protein_coding processed_transcript MGP_129S1SvImJ_T0054626.1 MGP_129S1SvImJ_G0025714.1 mouse_genomes_project 2 39426917 41574495 - MGP_129S1SvImJ_P0054626 Lrp1b protein_coding protein_coding MGP_129S1SvImJ_T0054627.1 MGP_129S1SvImJ_G0025714.1 mouse_genomes_project 2 39427203 39550489 - MGP_129S1SvImJ_P0054627 Lrp1b protein_coding protein_coding MGP_129S1SvImJ_T0054628.1 MGP_129S1SvImJ_G0025714.1 mouse_genomes_project 2 39427203 39462380 - MGP_129S1SvImJ_P0054628 Lrp1b protein_coding protein_coding MGP_129S1SvImJ_T0054629.1 MGP_129S1SvImJ_G0025714.1 mouse_genomes_project 2 39431946 39493229 - MGP_129S1SvImJ_P0054629 Lrp1b protein_coding protein_coding MGP_129S1SvImJ_T0054630.1 MGP_129S1SvImJ_G0025714.1 mouse_genomes_project 2 39520016 39546536 - Lrp1b protein_coding retained_intron MGP_129S1SvImJ_T0054631.1 MGP_129S1SvImJ_G0025714.1 mouse_genomes_project 2 39653349 40680774 - MGP_129S1SvImJ_P0054631 Lrp1b protein_coding protein_coding MGP_129S1SvImJ_T0054632.1 MGP_129S1SvImJ_G0025714.1 mouse_genomes_project 2 40142147 41573927 - MGP_129S1SvImJ_P0054632 Lrp1b protein_coding protein_coding MGP_129S1SvImJ_T0054633.1 MGP_129S1SvImJ_G0025714.1 mouse_genomes_project 2 40378115 41573943 - Lrp1b protein_coding retained_intron MGP_129S1SvImJ_T0054634.1 MGP_129S1SvImJ_G0025714.1 mouse_genomes_project 2 40959116 41573796 - MGP_129S1SvImJ_P0054634 Lrp1b protein_coding protein_coding MGP_129S1SvImJ_T0054635.1 MGP_129S1SvImJ_G0025714.1 mouse_genomes_project 2 41228604 41574126 - Lrp1b protein_coding retained_intron MGP_129S1SvImJ_T0054636.1 MGP_129S1SvImJ_G0025714.1 mouse_genomes_project 2 41570733 41573885 - MGP_129S1SvImJ_P0054636 Lrp1b protein_coding protein_coding MGP_129S1SvImJ_T0055388.1 MGP_129S1SvImJ_G0025850.1 mouse_genomes_project 2 75018790 75020806 + MGP_129S1SvImJ_P0055388 Hoxd8 protein_coding protein_coding MGP_129S1SvImJ_T0055389.1 MGP_129S1SvImJ_G0025850.1 mouse_genomes_project 2 75019080 75021927 + MGP_129S1SvImJ_P0055389 Hoxd8 protein_coding protein_coding MGP_129S1SvImJ_T0055390.1 MGP_129S1SvImJ_G0025850.1 mouse_genomes_project 2 75019326 75021301 + MGP_129S1SvImJ_P0055390 Hoxd8 protein_coding protein_coding MGP_129S1SvImJ_T0098354.1 MGP_129S1SvImJ_G0036439.1 mouse_genomes_project 2 95477749 95478498 - pseudogene pseudogene MGP_129S1SvImJ_T0053244.1 MGP_129S1SvImJ_G0025464.1 mouse_genomes_project 2 23590060 23594883 + MGP_129S1SvImJ_P0053244 Lcn6 protein_coding protein_coding MGP_129S1SvImJ_T0053245.1 MGP_129S1SvImJ_G0025464.1 mouse_genomes_project 2 23592540 23594880 + MGP_129S1SvImJ_P0053245 Lcn6 protein_coding protein_coding MGP_129S1SvImJ_T0053246.1 MGP_129S1SvImJ_G0025464.1 mouse_genomes_project 2 23593235 23594876 + MGP_129S1SvImJ_P0053246 Lcn6 protein_coding protein_coding MGP_129S1SvImJ_T0053247.1 MGP_129S1SvImJ_G0025464.1 mouse_genomes_project 2 23593387 23594876 + Lcn6 protein_coding processed_transcript MGP_129S1SvImJ_T0053237.1 MGP_129S1SvImJ_G0025461.1 mouse_genomes_project 2 23538087 23541452 - MGP_129S1SvImJ_P0053237 Fcna protein_coding protein_coding MGP_129S1SvImJ_T0053238.1 MGP_129S1SvImJ_G0025461.1 mouse_genomes_project 2 23538386 23540710 - Fcna protein_coding processed_transcript MGP_129S1SvImJ_T0013653.1 MGP_129S1SvImJ_G0011742.1 mouse_genomes_project 2 88161770 88165681 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058453.1 MGP_129S1SvImJ_G0026708.1 mouse_genomes_project 2 158886045 158891959 + MGP_129S1SvImJ_P0058453 Bpifa5 protein_coding protein_coding MGP_129S1SvImJ_T0013500.1 MGP_129S1SvImJ_G0011589.1 mouse_genomes_project 2 34823368 34823733 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013666.1 MGP_129S1SvImJ_G0011755.1 mouse_genomes_project 2 88705411 88705868 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056801.1 MGP_129S1SvImJ_G0026318.1 mouse_genomes_project 2 121355933 121395408 + MGP_129S1SvImJ_P0056801 Pak6 protein_coding protein_coding MGP_129S1SvImJ_T0056802.1 MGP_129S1SvImJ_G0026318.1 mouse_genomes_project 2 121356392 121357586 + Pak6 protein_coding retained_intron MGP_129S1SvImJ_T0056803.1 MGP_129S1SvImJ_G0026318.1 mouse_genomes_project 2 121356694 121370284 + Pak6 protein_coding processed_transcript MGP_129S1SvImJ_T0056804.1 MGP_129S1SvImJ_G0026318.1 mouse_genomes_project 2 121369742 121395406 + MGP_129S1SvImJ_P0056804 Pak6 protein_coding protein_coding MGP_129S1SvImJ_T0056805.1 MGP_129S1SvImJ_G0026318.1 mouse_genomes_project 2 121369776 121394614 + Pak6 protein_coding retained_intron MGP_129S1SvImJ_T0057377.1 MGP_129S1SvImJ_G0026434.1 mouse_genomes_project 2 129040952 129071330 - MGP_129S1SvImJ_P0057377 Cops2 protein_coding protein_coding MGP_129S1SvImJ_T0057378.1 MGP_129S1SvImJ_G0026434.1 mouse_genomes_project 2 129042247 129071230 - MGP_129S1SvImJ_P0057378 Cops2 protein_coding protein_coding MGP_129S1SvImJ_T0057379.1 MGP_129S1SvImJ_G0026434.1 mouse_genomes_project 2 129042250 129071330 - MGP_129S1SvImJ_P0057379 Cops2 protein_coding protein_coding MGP_129S1SvImJ_T0057380.1 MGP_129S1SvImJ_G0026434.1 mouse_genomes_project 2 129053977 129071187 - Cops2 protein_coding processed_transcript MGP_129S1SvImJ_T0057381.1 MGP_129S1SvImJ_G0026434.1 mouse_genomes_project 2 129061946 129071254 - Cops2 protein_coding processed_transcript MGP_129S1SvImJ_T0059111.1 MGP_129S1SvImJ_G0026842.1 mouse_genomes_project 2 169624511 169627058 - MGP_129S1SvImJ_P0059111 Svs2 protein_coding protein_coding MGP_129S1SvImJ_T0059112.1 MGP_129S1SvImJ_G0026842.1 mouse_genomes_project 2 169625110 169626857 - MGP_129S1SvImJ_P0059112 Svs2 protein_coding protein_coding MGP_129S1SvImJ_T0058265.1 MGP_129S1SvImJ_G0026646.1 mouse_genomes_project 2 156349549 156382834 + MGP_129S1SvImJ_P0058265 Rspo4 protein_coding protein_coding MGP_129S1SvImJ_T0098851.1 MGP_129S1SvImJ_G0036930.1 mouse_genomes_project 2 1125621 1130271 + Gm38085 sense_intronic sense_intronic MGP_129S1SvImJ_T0055879.1 MGP_129S1SvImJ_G0026073.1 mouse_genomes_project 2 90139433 90140369 + MGP_129S1SvImJ_P0055879 Olfr1212 protein_coding protein_coding MGP_129S1SvImJ_T0059044.1 MGP_129S1SvImJ_G0026820.1 mouse_genomes_project 2 168671359 168735645 - MGP_129S1SvImJ_P0059044 Jph2 protein_coding protein_coding MGP_129S1SvImJ_T0059045.1 MGP_129S1SvImJ_G0026820.1 mouse_genomes_project 2 168671359 168735689 - MGP_129S1SvImJ_P0059045 Jph2 protein_coding protein_coding MGP_129S1SvImJ_T0059526.1 MGP_129S1SvImJ_G0026943.1 mouse_genomes_project 2 178544468 178549847 + MGP_129S1SvImJ_P0059526 Cstf1 protein_coding protein_coding MGP_129S1SvImJ_T0059527.1 MGP_129S1SvImJ_G0026943.1 mouse_genomes_project 2 178544521 178556222 + MGP_129S1SvImJ_P0059527 Cstf1 protein_coding protein_coding MGP_129S1SvImJ_T0098564.1 MGP_129S1SvImJ_G0036649.1 mouse_genomes_project 2 106380819 106380932 + Gm25554 rRNA rRNA MGP_129S1SvImJ_T0010465.1 MGP_129S1SvImJ_G0008581.1 mouse_genomes_project 2 122872403 122872466 + Mir7665 miRNA miRNA MGP_129S1SvImJ_T0055956.1 MGP_129S1SvImJ_G0026129.1 mouse_genomes_project 2 91688909 91689601 - Ptprj protein_coding processed_transcript MGP_129S1SvImJ_T0055957.1 MGP_129S1SvImJ_G0026129.1 mouse_genomes_project 2 91688911 91742095 - MGP_129S1SvImJ_P0055957 Ptprj protein_coding protein_coding MGP_129S1SvImJ_T0055958.1 MGP_129S1SvImJ_G0026129.1 mouse_genomes_project 2 91692984 91733073 - MGP_129S1SvImJ_P0055958 Ptprj protein_coding protein_coding MGP_129S1SvImJ_T0055959.1 MGP_129S1SvImJ_G0026129.1 mouse_genomes_project 2 91692984 91844464 - MGP_129S1SvImJ_P0055959 Ptprj protein_coding protein_coding MGP_129S1SvImJ_T0004036.1 MGP_129S1SvImJ_G0003592.1 mouse_genomes_project 2 74882115 74887574 + 4930445N08Rik antisense antisense MGP_129S1SvImJ_T0007316.1 MGP_129S1SvImJ_G0006000.1 mouse_genomes_project 2 120467893 120469439 - Gm28183 lincRNA lincRNA MGP_129S1SvImJ_T0056568.1 MGP_129S1SvImJ_G0026232.1 mouse_genomes_project 2 108089233 108146202 + MGP_129S1SvImJ_P0056568 Immp1l protein_coding protein_coding MGP_129S1SvImJ_T0058897.1 MGP_129S1SvImJ_G0026788.1 mouse_genomes_project 2 163074653 163128999 + MGP_129S1SvImJ_P0058897 Rprd1b protein_coding protein_coding MGP_129S1SvImJ_T0058898.1 MGP_129S1SvImJ_G0026788.1 mouse_genomes_project 2 163074664 163095003 + Rprd1b protein_coding retained_intron MGP_129S1SvImJ_T0058899.1 MGP_129S1SvImJ_G0026788.1 mouse_genomes_project 2 163074848 163128999 + Rprd1b protein_coding processed_transcript MGP_129S1SvImJ_T0058900.1 MGP_129S1SvImJ_G0026788.1 mouse_genomes_project 2 163074857 163128999 + MGP_129S1SvImJ_P0058900 Rprd1b protein_coding protein_coding MGP_129S1SvImJ_T0058901.1 MGP_129S1SvImJ_G0026788.1 mouse_genomes_project 2 163074877 163128999 + MGP_129S1SvImJ_P0058901 Rprd1b protein_coding protein_coding MGP_129S1SvImJ_T0058902.1 MGP_129S1SvImJ_G0026788.1 mouse_genomes_project 2 163074955 163187858 + MGP_129S1SvImJ_P0058902 Rprd1b protein_coding protein_coding MGP_129S1SvImJ_T0052701.1 MGP_129S1SvImJ_G0025367.1 mouse_genomes_project 2 13096180 13856688 + MGP_129S1SvImJ_P0052701 Malrd1 protein_coding protein_coding MGP_129S1SvImJ_T0053780.1 MGP_129S1SvImJ_G0025559.1 mouse_genomes_project 2 28455956 28482059 + MGP_129S1SvImJ_P0053780 Gm28035 protein_coding protein_coding MGP_129S1SvImJ_T0053781.1 MGP_129S1SvImJ_G0025559.1 mouse_genomes_project 2 28455963 28482064 + MGP_129S1SvImJ_P0053781 Gm28035 protein_coding protein_coding MGP_129S1SvImJ_T0004134.1 MGP_129S1SvImJ_G0003656.1 mouse_genomes_project 2 148415223 148416406 + 1700108N11Rik antisense antisense MGP_129S1SvImJ_T0010487.1 MGP_129S1SvImJ_G0008603.1 mouse_genomes_project 2 163306680 163306742 - Mir7685 miRNA miRNA MGP_129S1SvImJ_T0004069.1 MGP_129S1SvImJ_G0003611.1 mouse_genomes_project 2 107884895 107885995 + Gm13954 antisense antisense MGP_129S1SvImJ_T0057283.1 MGP_129S1SvImJ_G0026410.1 mouse_genomes_project 2 125276486 125299951 - MGP_129S1SvImJ_P0057283 Duox2 protein_coding protein_coding MGP_129S1SvImJ_T0057284.1 MGP_129S1SvImJ_G0026410.1 mouse_genomes_project 2 125279942 125282824 - Duox2 protein_coding processed_transcript MGP_129S1SvImJ_T0007435.1 MGP_129S1SvImJ_G0006101.1 mouse_genomes_project 2 178453917 178456305 + Gm14275 lincRNA lincRNA MGP_129S1SvImJ_T0057819.1 MGP_129S1SvImJ_G0026532.1 mouse_genomes_project 2 135087659 135104132 - MGP_129S1SvImJ_P0057819 Adra1d protein_coding protein_coding MGP_129S1SvImJ_T0055880.1 MGP_129S1SvImJ_G0026074.1 mouse_genomes_project 2 90148693 90149629 - MGP_129S1SvImJ_P0055880 protein_coding protein_coding MGP_129S1SvImJ_T0102424.1 MGP_129S1SvImJ_G0040258.1 mouse_genomes_project 2 89161932 89162882 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0007389.1 MGP_129S1SvImJ_G0006062.1 mouse_genomes_project 2 168142517 168143606 - Gm14255 lincRNA lincRNA MGP_129S1SvImJ_T0004202.1 MGP_129S1SvImJ_G0003711.1 mouse_genomes_project 2 179546098 179547829 + Pmepa1os antisense antisense MGP_129S1SvImJ_T0059114.1 MGP_129S1SvImJ_G0026844.1 mouse_genomes_project 2 169678504 169709297 + MGP_129S1SvImJ_P0059114 Svs3a protein_coding protein_coding MGP_129S1SvImJ_T0007361.1 MGP_129S1SvImJ_G0006037.1 mouse_genomes_project 2 153631496 153636365 + Gm14135 lincRNA lincRNA MGP_129S1SvImJ_T0053453.1 MGP_129S1SvImJ_G0025504.1 mouse_genomes_project 2 24926688 24937143 - MGP_129S1SvImJ_P0053453 Rexo4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0053454.1 MGP_129S1SvImJ_G0025504.1 mouse_genomes_project 2 24927730 24937173 - MGP_129S1SvImJ_P0053454 Rexo4 protein_coding protein_coding MGP_129S1SvImJ_T0053455.1 MGP_129S1SvImJ_G0025504.1 mouse_genomes_project 2 24928135 24929454 - Rexo4 protein_coding processed_transcript MGP_129S1SvImJ_T0053456.1 MGP_129S1SvImJ_G0025504.1 mouse_genomes_project 2 24929467 24937172 - Rexo4 protein_coding processed_transcript MGP_129S1SvImJ_T0053457.1 MGP_129S1SvImJ_G0025504.1 mouse_genomes_project 2 24931170 24933160 - Rexo4 protein_coding processed_transcript MGP_129S1SvImJ_T0053458.1 MGP_129S1SvImJ_G0025504.1 mouse_genomes_project 2 24935772 24937218 - Rexo4 protein_coding processed_transcript MGP_129S1SvImJ_T0059819.1 MGP_129S1SvImJ_G0027014.1 mouse_genomes_project 2 187780858 187790061 - MGP_129S1SvImJ_P0059819 Srms protein_coding protein_coding MGP_129S1SvImJ_T0054485.1 MGP_129S1SvImJ_G0025670.1 mouse_genomes_project 2 35336365 35337301 + MGP_129S1SvImJ_P0054485 Olfr345 protein_coding protein_coding MGP_129S1SvImJ_T0053798.1 MGP_129S1SvImJ_G0025564.1 mouse_genomes_project 2 28504755 28569700 + MGP_129S1SvImJ_P0053798 Nup188 protein_coding protein_coding MGP_129S1SvImJ_T0053799.1 MGP_129S1SvImJ_G0025564.1 mouse_genomes_project 2 28504755 28527805 + MGP_129S1SvImJ_P0053799 Nup188 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053800.1 MGP_129S1SvImJ_G0025564.1 mouse_genomes_project 2 28504775 28524165 + Nup188 protein_coding processed_transcript MGP_129S1SvImJ_T0053801.1 MGP_129S1SvImJ_G0025564.1 mouse_genomes_project 2 28504782 28523883 + MGP_129S1SvImJ_P0053801 Nup188 protein_coding protein_coding MGP_129S1SvImJ_T0053802.1 MGP_129S1SvImJ_G0025564.1 mouse_genomes_project 2 28504785 28523882 + MGP_129S1SvImJ_P0053802 Nup188 protein_coding protein_coding MGP_129S1SvImJ_T0053803.1 MGP_129S1SvImJ_G0025564.1 mouse_genomes_project 2 28504787 28549783 + Nup188 protein_coding retained_intron MGP_129S1SvImJ_T0053804.1 MGP_129S1SvImJ_G0025564.1 mouse_genomes_project 2 28568373 28569579 + Nup188 protein_coding retained_intron MGP_129S1SvImJ_T0052912.1 MGP_129S1SvImJ_G0025409.1 mouse_genomes_project 2 22172165 22200955 + MGP_129S1SvImJ_P0052912 Psd4 protein_coding protein_coding MGP_129S1SvImJ_T0052913.1 MGP_129S1SvImJ_G0025409.1 mouse_genomes_project 2 22172195 22221617 + MGP_129S1SvImJ_P0052913 Psd4 protein_coding protein_coding MGP_129S1SvImJ_T0052914.1 MGP_129S1SvImJ_G0025409.1 mouse_genomes_project 2 22190754 22215392 + MGP_129S1SvImJ_P0052914 Psd4 protein_coding protein_coding MGP_129S1SvImJ_T0052915.1 MGP_129S1SvImJ_G0025409.1 mouse_genomes_project 2 22190757 22201108 + MGP_129S1SvImJ_P0052915 Psd4 protein_coding protein_coding MGP_129S1SvImJ_T0052916.1 MGP_129S1SvImJ_G0025409.1 mouse_genomes_project 2 22190758 22204017 + Psd4 protein_coding processed_transcript MGP_129S1SvImJ_T0052917.1 MGP_129S1SvImJ_G0025409.1 mouse_genomes_project 2 22190775 22201002 + MGP_129S1SvImJ_P0052917 Psd4 protein_coding protein_coding MGP_129S1SvImJ_T0052918.1 MGP_129S1SvImJ_G0025409.1 mouse_genomes_project 2 22191991 22201288 + MGP_129S1SvImJ_P0052918 Psd4 protein_coding protein_coding MGP_129S1SvImJ_T0052919.1 MGP_129S1SvImJ_G0025409.1 mouse_genomes_project 2 22192039 22214863 + MGP_129S1SvImJ_P0052919 Psd4 protein_coding protein_coding MGP_129S1SvImJ_T0052920.1 MGP_129S1SvImJ_G0025409.1 mouse_genomes_project 2 22207698 22209915 + MGP_129S1SvImJ_P0052920 Psd4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052921.1 MGP_129S1SvImJ_G0025409.1 mouse_genomes_project 2 22212291 22213670 + Psd4 protein_coding retained_intron MGP_129S1SvImJ_T0059866.1 MGP_129S1SvImJ_G0027021.1 mouse_genomes_project 2 187951824 187969800 + MGP_129S1SvImJ_P0059866 Zgpat protein_coding protein_coding MGP_129S1SvImJ_T0059867.1 MGP_129S1SvImJ_G0027021.1 mouse_genomes_project 2 187952301 187969788 + MGP_129S1SvImJ_P0059867 Zgpat protein_coding protein_coding MGP_129S1SvImJ_T0059868.1 MGP_129S1SvImJ_G0027021.1 mouse_genomes_project 2 187952319 187972634 + MGP_129S1SvImJ_P0059868 Zgpat protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059869.1 MGP_129S1SvImJ_G0027021.1 mouse_genomes_project 2 187952348 187972632 + Zgpat protein_coding retained_intron MGP_129S1SvImJ_T0059870.1 MGP_129S1SvImJ_G0027021.1 mouse_genomes_project 2 187967399 187968825 + Zgpat protein_coding retained_intron MGP_129S1SvImJ_T0059871.1 MGP_129S1SvImJ_G0027021.1 mouse_genomes_project 2 187968644 187969744 + MGP_129S1SvImJ_P0059871 Zgpat protein_coding protein_coding MGP_129S1SvImJ_T0058907.1 MGP_129S1SvImJ_G0026790.1 mouse_genomes_project 2 163244347 163291595 - MGP_129S1SvImJ_P0058907 D630003M21Rik protein_coding protein_coding MGP_129S1SvImJ_T0058908.1 MGP_129S1SvImJ_G0026790.1 mouse_genomes_project 2 163247957 163291595 - MGP_129S1SvImJ_P0058908 D630003M21Rik protein_coding protein_coding MGP_129S1SvImJ_T0058909.1 MGP_129S1SvImJ_G0026790.1 mouse_genomes_project 2 163257551 163291595 - MGP_129S1SvImJ_P0058909 D630003M21Rik protein_coding protein_coding MGP_129S1SvImJ_T0013544.1 MGP_129S1SvImJ_G0011633.1 mouse_genomes_project 2 50884378 50884613 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100965.1 MGP_129S1SvImJ_G0039032.1 mouse_genomes_project 2 130964066 130964124 + Gm22889 snoRNA snoRNA MGP_129S1SvImJ_T0004179.1 MGP_129S1SvImJ_G0003694.1 mouse_genomes_project 2 170251005 170267118 - Gm11457 antisense antisense MGP_129S1SvImJ_T0004180.1 MGP_129S1SvImJ_G0003694.1 mouse_genomes_project 2 170251015 170267123 - Gm11457 antisense antisense MGP_129S1SvImJ_T0004181.1 MGP_129S1SvImJ_G0003694.1 mouse_genomes_project 2 170251027 170267165 - Gm11457 antisense antisense MGP_129S1SvImJ_T0058155.1 MGP_129S1SvImJ_G0026617.1 mouse_genomes_project 2 153171823 153185968 + MGP_129S1SvImJ_P0058155 Cst13 protein_coding protein_coding MGP_129S1SvImJ_T0017919.1 MGP_129S1SvImJ_G0015479.1 mouse_genomes_project 2 157971861 157979404 - 2500004C02Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017920.1 MGP_129S1SvImJ_G0015479.1 mouse_genomes_project 2 157976109 157976816 - 2500004C02Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017921.1 MGP_129S1SvImJ_G0015479.1 mouse_genomes_project 2 157976229 157979667 - 2500004C02Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0010441.1 MGP_129S1SvImJ_G0008557.1 mouse_genomes_project 2 76872989 76873092 + Gm23164 miRNA miRNA MGP_129S1SvImJ_T0099706.1 MGP_129S1SvImJ_G0037773.1 mouse_genomes_project 2 152186609 152186716 - Gm25516 snRNA snRNA MGP_129S1SvImJ_T0053913.1 MGP_129S1SvImJ_G0025578.1 mouse_genomes_project 2 29257021 29264328 - MGP_129S1SvImJ_P0053913 Tor1a protein_coding protein_coding MGP_129S1SvImJ_T0053914.1 MGP_129S1SvImJ_G0025578.1 mouse_genomes_project 2 29257074 29264267 - Tor1a protein_coding retained_intron MGP_129S1SvImJ_T0053915.1 MGP_129S1SvImJ_G0025578.1 mouse_genomes_project 2 29257406 29260243 - Tor1a protein_coding retained_intron MGP_129S1SvImJ_T0053916.1 MGP_129S1SvImJ_G0025578.1 mouse_genomes_project 2 29257447 29260270 - Tor1a protein_coding retained_intron MGP_129S1SvImJ_T0053917.1 MGP_129S1SvImJ_G0025578.1 mouse_genomes_project 2 29263305 29264283 - Tor1a protein_coding retained_intron MGP_129S1SvImJ_T0054836.1 MGP_129S1SvImJ_G0025748.1 mouse_genomes_project 2 57813829 57894227 - MGP_129S1SvImJ_P0054836 Acvr1c protein_coding protein_coding MGP_129S1SvImJ_T0054837.1 MGP_129S1SvImJ_G0025748.1 mouse_genomes_project 2 57813829 57894227 - MGP_129S1SvImJ_P0054837 Acvr1c protein_coding protein_coding MGP_129S1SvImJ_T0054838.1 MGP_129S1SvImJ_G0025748.1 mouse_genomes_project 2 57814012 57894155 - MGP_129S1SvImJ_P0054838 Acvr1c protein_coding protein_coding MGP_129S1SvImJ_T0054839.1 MGP_129S1SvImJ_G0025748.1 mouse_genomes_project 2 57837342 57869636 - MGP_129S1SvImJ_P0054839 Acvr1c protein_coding protein_coding MGP_129S1SvImJ_T0004109.1 MGP_129S1SvImJ_G0003641.1 mouse_genomes_project 2 135711903 135790411 + Gm14051 antisense antisense MGP_129S1SvImJ_T0013863.1 MGP_129S1SvImJ_G0011952.1 mouse_genomes_project 2 164917244 164917764 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056031.1 MGP_129S1SvImJ_G0026140.1 mouse_genomes_project 2 92362526 92371101 - MGP_129S1SvImJ_P0056031 Slc39a13 protein_coding protein_coding MGP_129S1SvImJ_T0056032.1 MGP_129S1SvImJ_G0026140.1 mouse_genomes_project 2 92362526 92370913 - MGP_129S1SvImJ_P0056032 Slc39a13 protein_coding protein_coding MGP_129S1SvImJ_T0056033.1 MGP_129S1SvImJ_G0026140.1 mouse_genomes_project 2 92363609 92370967 - MGP_129S1SvImJ_P0056033 Slc39a13 protein_coding protein_coding MGP_129S1SvImJ_T0056034.1 MGP_129S1SvImJ_G0026140.1 mouse_genomes_project 2 92363857 92366182 - Slc39a13 protein_coding processed_transcript MGP_129S1SvImJ_T0056035.1 MGP_129S1SvImJ_G0026140.1 mouse_genomes_project 2 92363860 92365122 - Slc39a13 protein_coding processed_transcript MGP_129S1SvImJ_T0056036.1 MGP_129S1SvImJ_G0026140.1 mouse_genomes_project 2 92364140 92370982 - Slc39a13 protein_coding processed_transcript MGP_129S1SvImJ_T0056037.1 MGP_129S1SvImJ_G0026140.1 mouse_genomes_project 2 92365376 92366912 - Slc39a13 protein_coding processed_transcript MGP_129S1SvImJ_T0056038.1 MGP_129S1SvImJ_G0026140.1 mouse_genomes_project 2 92366316 92370923 - Slc39a13 protein_coding processed_transcript MGP_129S1SvImJ_T0056039.1 MGP_129S1SvImJ_G0026140.1 mouse_genomes_project 2 92366781 92370871 - MGP_129S1SvImJ_P0056039 Slc39a13 protein_coding protein_coding MGP_129S1SvImJ_T0056040.1 MGP_129S1SvImJ_G0026140.1 mouse_genomes_project 2 92369114 92369555 - Slc39a13 protein_coding processed_transcript MGP_129S1SvImJ_T0056041.1 MGP_129S1SvImJ_G0026140.1 mouse_genomes_project 2 92369801 92370923 - Slc39a13 protein_coding processed_transcript MGP_129S1SvImJ_T0055408.1 MGP_129S1SvImJ_G0025857.1 mouse_genomes_project 2 76040486 76070934 - MGP_129S1SvImJ_P0055408 Nfe2l2 protein_coding protein_coding MGP_129S1SvImJ_T0055409.1 MGP_129S1SvImJ_G0025857.1 mouse_genomes_project 2 76057352 76070782 - Nfe2l2 protein_coding processed_transcript MGP_129S1SvImJ_T0059579.1 MGP_129S1SvImJ_G0026960.1 mouse_genomes_project 2 180023765 180027468 + MGP_129S1SvImJ_P0059579 1700010B08Rik protein_coding protein_coding MGP_129S1SvImJ_T0054994.1 MGP_129S1SvImJ_G0025772.1 mouse_genomes_project 2 62293694 62346797 - MGP_129S1SvImJ_P0054994 Ifih1 protein_coding protein_coding MGP_129S1SvImJ_T0054995.1 MGP_129S1SvImJ_G0025772.1 mouse_genomes_project 2 62295343 62346739 - MGP_129S1SvImJ_P0054995 Ifih1 protein_coding protein_coding MGP_129S1SvImJ_T0054996.1 MGP_129S1SvImJ_G0025772.1 mouse_genomes_project 2 62306074 62346841 - Ifih1 protein_coding retained_intron MGP_129S1SvImJ_T0054997.1 MGP_129S1SvImJ_G0025772.1 mouse_genomes_project 2 62328032 62340062 - Ifih1 protein_coding processed_transcript MGP_129S1SvImJ_T0054998.1 MGP_129S1SvImJ_G0025772.1 mouse_genomes_project 2 62332067 62346744 - Ifih1 protein_coding retained_intron MGP_129S1SvImJ_T0004122.1 MGP_129S1SvImJ_G0003648.1 mouse_genomes_project 2 139902133 139905289 + Gm14218 antisense antisense MGP_129S1SvImJ_T0059719.1 MGP_129S1SvImJ_G0026995.1 mouse_genomes_project 2 187020201 187065329 + MGP_129S1SvImJ_P0059719 Ntsr1 protein_coding protein_coding MGP_129S1SvImJ_T0059720.1 MGP_129S1SvImJ_G0026995.1 mouse_genomes_project 2 187020452 187064568 + MGP_129S1SvImJ_P0059720 Ntsr1 protein_coding protein_coding MGP_129S1SvImJ_T0059086.1 MGP_129S1SvImJ_G0026831.1 mouse_genomes_project 2 169214053 169219605 + MGP_129S1SvImJ_P0059086 Kcnk15 protein_coding protein_coding MGP_129S1SvImJ_T0059087.1 MGP_129S1SvImJ_G0026831.1 mouse_genomes_project 2 169214135 169220409 + MGP_129S1SvImJ_P0059087 Kcnk15 protein_coding protein_coding MGP_129S1SvImJ_T0102443.1 MGP_129S1SvImJ_G0040277.1 mouse_genomes_project 2 142718880 142719465 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0055757.1 MGP_129S1SvImJ_G0025965.1 mouse_genomes_project 2 87156235 87157174 + MGP_129S1SvImJ_P0055757 Olfr1052 protein_coding protein_coding MGP_129S1SvImJ_T0058460.1 MGP_129S1SvImJ_G0026712.1 mouse_genomes_project 2 159032182 159045905 + MGP_129S1SvImJ_P0058460 Bpifb9a protein_coding protein_coding MGP_129S1SvImJ_T0053248.1 MGP_129S1SvImJ_G0025465.1 mouse_genomes_project 2 23596000 23599356 + MGP_129S1SvImJ_P0053248 Lcn10 protein_coding protein_coding MGP_129S1SvImJ_T0055756.1 MGP_129S1SvImJ_G0025964.1 mouse_genomes_project 2 87136674 87137621 - MGP_129S1SvImJ_P0055756 Olfr1046 protein_coding protein_coding MGP_129S1SvImJ_T0004072.1 MGP_129S1SvImJ_G0003613.1 mouse_genomes_project 2 115860423 115913998 - Gm13963 antisense antisense MGP_129S1SvImJ_T0055387.1 MGP_129S1SvImJ_G0025849.1 mouse_genomes_project 2 75011902 75014384 + MGP_129S1SvImJ_P0055387 Hoxd9 protein_coding protein_coding MGP_129S1SvImJ_T0098745.1 MGP_129S1SvImJ_G0036830.1 mouse_genomes_project 2 109041054 109041177 + Gm22813 scaRNA scaRNA MGP_129S1SvImJ_T0013732.1 MGP_129S1SvImJ_G0011821.1 mouse_genomes_project 2 113951948 113979159 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059898.1 MGP_129S1SvImJ_G0027027.1 mouse_genomes_project 2 188121179 188160847 + MGP_129S1SvImJ_P0059898 Dnajc5 protein_coding protein_coding MGP_129S1SvImJ_T0059899.1 MGP_129S1SvImJ_G0027027.1 mouse_genomes_project 2 188121220 188157948 + MGP_129S1SvImJ_P0059899 Dnajc5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059900.1 MGP_129S1SvImJ_G0027027.1 mouse_genomes_project 2 188121245 188157946 + MGP_129S1SvImJ_P0059900 Dnajc5 protein_coding protein_coding MGP_129S1SvImJ_T0059901.1 MGP_129S1SvImJ_G0027027.1 mouse_genomes_project 2 188121506 188154486 + MGP_129S1SvImJ_P0059901 Dnajc5 protein_coding protein_coding MGP_129S1SvImJ_T0059902.1 MGP_129S1SvImJ_G0027027.1 mouse_genomes_project 2 188121641 188155304 + MGP_129S1SvImJ_P0059902 Dnajc5 protein_coding protein_coding MGP_129S1SvImJ_T0059903.1 MGP_129S1SvImJ_G0027027.1 mouse_genomes_project 2 188155039 188155972 + Dnajc5 protein_coding processed_transcript MGP_129S1SvImJ_T0059038.1 MGP_129S1SvImJ_G0026818.1 mouse_genomes_project 2 168393615 168394437 - MGP_129S1SvImJ_P0059038 Gtsf1l protein_coding protein_coding MGP_129S1SvImJ_T0053250.1 MGP_129S1SvImJ_G0025467.1 mouse_genomes_project 2 23626624 23627607 + MGP_129S1SvImJ_P0053250 Bmyc protein_coding protein_coding MGP_129S1SvImJ_T0055943.1 MGP_129S1SvImJ_G0026118.1 mouse_genomes_project 2 91216401 91217014 + MGP_129S1SvImJ_P0055943 Olfr1261 protein_coding protein_coding MGP_129S1SvImJ_T0013668.1 MGP_129S1SvImJ_G0011757.1 mouse_genomes_project 2 88943934 88944461 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054076.1 MGP_129S1SvImJ_G0025602.1 mouse_genomes_project 2 30753736 30798783 - MGP_129S1SvImJ_P0054076 Dnm1 protein_coding protein_coding MGP_129S1SvImJ_T0054077.1 MGP_129S1SvImJ_G0025602.1 mouse_genomes_project 2 30753736 30798744 - MGP_129S1SvImJ_P0054077 Dnm1 protein_coding protein_coding MGP_129S1SvImJ_T0054078.1 MGP_129S1SvImJ_G0025602.1 mouse_genomes_project 2 30753736 30798765 - MGP_129S1SvImJ_P0054078 Dnm1 protein_coding protein_coding MGP_129S1SvImJ_T0054079.1 MGP_129S1SvImJ_G0025602.1 mouse_genomes_project 2 30753736 30798771 - MGP_129S1SvImJ_P0054079 Dnm1 protein_coding protein_coding MGP_129S1SvImJ_T0054080.1 MGP_129S1SvImJ_G0025602.1 mouse_genomes_project 2 30753736 30798819 - MGP_129S1SvImJ_P0054080 Dnm1 protein_coding protein_coding MGP_129S1SvImJ_T0054081.1 MGP_129S1SvImJ_G0025602.1 mouse_genomes_project 2 30753736 30798764 - MGP_129S1SvImJ_P0054081 Dnm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054082.1 MGP_129S1SvImJ_G0025602.1 mouse_genomes_project 2 30753743 30798715 - MGP_129S1SvImJ_P0054082 Dnm1 protein_coding protein_coding MGP_129S1SvImJ_T0054083.1 MGP_129S1SvImJ_G0025602.1 mouse_genomes_project 2 30753762 30766140 - MGP_129S1SvImJ_P0054083 Dnm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054084.1 MGP_129S1SvImJ_G0025602.1 mouse_genomes_project 2 30754106 30798751 - MGP_129S1SvImJ_P0054084 Dnm1 protein_coding protein_coding MGP_129S1SvImJ_T0054085.1 MGP_129S1SvImJ_G0025602.1 mouse_genomes_project 2 30754189 30755901 - Dnm1 protein_coding retained_intron MGP_129S1SvImJ_T0054086.1 MGP_129S1SvImJ_G0025602.1 mouse_genomes_project 2 30754740 30758189 - MGP_129S1SvImJ_P0054086 Dnm1 protein_coding protein_coding MGP_129S1SvImJ_T0054087.1 MGP_129S1SvImJ_G0025602.1 mouse_genomes_project 2 30754744 30798783 - MGP_129S1SvImJ_P0054087 Dnm1 protein_coding protein_coding MGP_129S1SvImJ_T0054088.1 MGP_129S1SvImJ_G0025602.1 mouse_genomes_project 2 30755115 30758159 - MGP_129S1SvImJ_P0054088 Dnm1 protein_coding protein_coding MGP_129S1SvImJ_T0054089.1 MGP_129S1SvImJ_G0025602.1 mouse_genomes_project 2 30755528 30758155 - MGP_129S1SvImJ_P0054089 Dnm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054090.1 MGP_129S1SvImJ_G0025602.1 mouse_genomes_project 2 30757492 30762900 - Dnm1 protein_coding processed_transcript MGP_129S1SvImJ_T0054091.1 MGP_129S1SvImJ_G0025602.1 mouse_genomes_project 2 30757507 30758343 - Dnm1 protein_coding retained_intron MGP_129S1SvImJ_T0054092.1 MGP_129S1SvImJ_G0025602.1 mouse_genomes_project 2 30785423 30798732 - MGP_129S1SvImJ_P0054092 Dnm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0007368.1 MGP_129S1SvImJ_G0006044.1 mouse_genomes_project 2 156334500 156337543 + Gm14155 lincRNA lincRNA MGP_129S1SvImJ_T0055902.1 MGP_129S1SvImJ_G0026092.1 mouse_genomes_project 2 90501270 90502206 - MGP_129S1SvImJ_P0055902 Olfr1232 protein_coding protein_coding MGP_129S1SvImJ_T0053805.1 MGP_129S1SvImJ_G0025565.1 mouse_genomes_project 2 28570242 28584618 - MGP_129S1SvImJ_P0053805 Sh3glb2 protein_coding protein_coding MGP_129S1SvImJ_T0053806.1 MGP_129S1SvImJ_G0025565.1 mouse_genomes_project 2 28570242 28584694 - MGP_129S1SvImJ_P0053806 Sh3glb2 protein_coding protein_coding MGP_129S1SvImJ_T0053807.1 MGP_129S1SvImJ_G0025565.1 mouse_genomes_project 2 28570244 28584667 - MGP_129S1SvImJ_P0053807 Sh3glb2 protein_coding protein_coding MGP_129S1SvImJ_T0053808.1 MGP_129S1SvImJ_G0025565.1 mouse_genomes_project 2 28570244 28584643 - MGP_129S1SvImJ_P0053808 Sh3glb2 protein_coding protein_coding MGP_129S1SvImJ_T0053809.1 MGP_129S1SvImJ_G0025565.1 mouse_genomes_project 2 28570244 28584710 - MGP_129S1SvImJ_P0053809 Sh3glb2 protein_coding protein_coding MGP_129S1SvImJ_T0053810.1 MGP_129S1SvImJ_G0025565.1 mouse_genomes_project 2 28570568 28584683 - Sh3glb2 protein_coding retained_intron MGP_129S1SvImJ_T0053811.1 MGP_129S1SvImJ_G0025565.1 mouse_genomes_project 2 28570574 28571535 - Sh3glb2 protein_coding processed_transcript MGP_129S1SvImJ_T0053812.1 MGP_129S1SvImJ_G0025565.1 mouse_genomes_project 2 28571253 28584715 - Sh3glb2 protein_coding processed_transcript MGP_129S1SvImJ_T0053813.1 MGP_129S1SvImJ_G0025565.1 mouse_genomes_project 2 28571319 28573090 - Sh3glb2 protein_coding retained_intron MGP_129S1SvImJ_T0053814.1 MGP_129S1SvImJ_G0025565.1 mouse_genomes_project 2 28571541 28573021 - Sh3glb2 protein_coding retained_intron MGP_129S1SvImJ_T0053815.1 MGP_129S1SvImJ_G0025565.1 mouse_genomes_project 2 28573501 28580742 - Sh3glb2 protein_coding retained_intron MGP_129S1SvImJ_T0053816.1 MGP_129S1SvImJ_G0025565.1 mouse_genomes_project 2 28573523 28580257 - Sh3glb2 protein_coding retained_intron MGP_129S1SvImJ_T0053817.1 MGP_129S1SvImJ_G0025565.1 mouse_genomes_project 2 28574916 28584623 - Sh3glb2 protein_coding processed_transcript MGP_129S1SvImJ_T0053818.1 MGP_129S1SvImJ_G0025565.1 mouse_genomes_project 2 28575173 28584638 - Sh3glb2 protein_coding retained_intron MGP_129S1SvImJ_T0054181.1 MGP_129S1SvImJ_G0025617.1 mouse_genomes_project 2 31162881 31176356 - MGP_129S1SvImJ_P0054181 Fpgs protein_coding protein_coding MGP_129S1SvImJ_T0054182.1 MGP_129S1SvImJ_G0025617.1 mouse_genomes_project 2 31162882 31176306 - Fpgs protein_coding retained_intron MGP_129S1SvImJ_T0054183.1 MGP_129S1SvImJ_G0025617.1 mouse_genomes_project 2 31163089 31166229 - Fpgs protein_coding retained_intron MGP_129S1SvImJ_T0054184.1 MGP_129S1SvImJ_G0025617.1 mouse_genomes_project 2 31163574 31165277 - Fpgs protein_coding processed_transcript MGP_129S1SvImJ_T0054185.1 MGP_129S1SvImJ_G0025617.1 mouse_genomes_project 2 31166774 31167775 - Fpgs protein_coding retained_intron MGP_129S1SvImJ_T0054186.1 MGP_129S1SvImJ_G0025617.1 mouse_genomes_project 2 31167121 31188797 - MGP_129S1SvImJ_P0054186 Fpgs protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054187.1 MGP_129S1SvImJ_G0025617.1 mouse_genomes_project 2 31167286 31168110 - Fpgs protein_coding retained_intron MGP_129S1SvImJ_T0054188.1 MGP_129S1SvImJ_G0025617.1 mouse_genomes_project 2 31167688 31188805 - MGP_129S1SvImJ_P0054188 Fpgs protein_coding protein_coding MGP_129S1SvImJ_T0054189.1 MGP_129S1SvImJ_G0025617.1 mouse_genomes_project 2 31174621 31175415 - Fpgs protein_coding retained_intron MGP_129S1SvImJ_T0054190.1 MGP_129S1SvImJ_G0025617.1 mouse_genomes_project 2 31174883 31188691 - MGP_129S1SvImJ_P0054190 Fpgs protein_coding protein_coding MGP_129S1SvImJ_T0007166.1 MGP_129S1SvImJ_G0005880.1 mouse_genomes_project 2 23478238 23482907 + Gm26702 lincRNA lincRNA MGP_129S1SvImJ_T0054725.1 MGP_129S1SvImJ_G0025724.1 mouse_genomes_project 2 48983710 49154210 + MGP_129S1SvImJ_P0054725 Lypd6b protein_coding protein_coding MGP_129S1SvImJ_T0054726.1 MGP_129S1SvImJ_G0025724.1 mouse_genomes_project 2 48983753 49136308 + Lypd6b protein_coding processed_transcript MGP_129S1SvImJ_T0054727.1 MGP_129S1SvImJ_G0025724.1 mouse_genomes_project 2 49042889 49147876 + Lypd6b protein_coding processed_transcript MGP_129S1SvImJ_T0054728.1 MGP_129S1SvImJ_G0025724.1 mouse_genomes_project 2 49136206 49154210 + MGP_129S1SvImJ_P0054728 Lypd6b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0053984.1 MGP_129S1SvImJ_G0025587.1 mouse_genomes_project 2 29997287 30013024 + MGP_129S1SvImJ_P0053984 Prdm12 protein_coding protein_coding MGP_129S1SvImJ_T0011541.1 MGP_129S1SvImJ_G0009657.1 mouse_genomes_project 2 163565147 163565233 + Gm24379 misc_RNA misc_RNA MGP_129S1SvImJ_T0007411.1 MGP_129S1SvImJ_G0006080.1 mouse_genomes_project 2 173639923 173643882 + Gm14319 lincRNA lincRNA MGP_129S1SvImJ_T0013835.1 MGP_129S1SvImJ_G0011924.1 mouse_genomes_project 2 156302612 156303750 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010440.1 MGP_129S1SvImJ_G0008556.1 mouse_genomes_project 2 76711760 76711874 + Gm44337 miRNA miRNA MGP_129S1SvImJ_T0101001.1 MGP_129S1SvImJ_G0039068.1 mouse_genomes_project 2 172764624 172764714 + Snord12 snoRNA snoRNA MGP_129S1SvImJ_T0010466.1 MGP_129S1SvImJ_G0008582.1 mouse_genomes_project 2 123849953 123850030 - Gm44325 miRNA miRNA MGP_129S1SvImJ_T0052446.1 MGP_129S1SvImJ_G0025329.1 mouse_genomes_project 2 3243364 3278140 - MGP_129S1SvImJ_P0052446 Proser2 protein_coding protein_coding MGP_129S1SvImJ_T0052447.1 MGP_129S1SvImJ_G0025329.1 mouse_genomes_project 2 3245700 3278075 - MGP_129S1SvImJ_P0052447 Proser2 protein_coding protein_coding MGP_129S1SvImJ_T0052448.1 MGP_129S1SvImJ_G0025329.1 mouse_genomes_project 2 3249121 3278068 - MGP_129S1SvImJ_P0052448 Proser2 protein_coding protein_coding MGP_129S1SvImJ_T0052449.1 MGP_129S1SvImJ_G0025329.1 mouse_genomes_project 2 3272735 3278110 - Proser2 protein_coding processed_transcript MGP_129S1SvImJ_T0056282.1 MGP_129S1SvImJ_G0026177.1 mouse_genomes_project 2 95158771 95197473 + MGP_129S1SvImJ_P0056282 Alx4 protein_coding protein_coding MGP_129S1SvImJ_T0056283.1 MGP_129S1SvImJ_G0026177.1 mouse_genomes_project 2 95158775 95197473 + MGP_129S1SvImJ_P0056283 Alx4 protein_coding protein_coding MGP_129S1SvImJ_T0007194.1 MGP_129S1SvImJ_G0005900.1 mouse_genomes_project 2 35766202 35767079 - Gm13434 lincRNA lincRNA MGP_129S1SvImJ_T0099685.1 MGP_129S1SvImJ_G0037752.1 mouse_genomes_project 2 92509257 92509363 + Gm23390 snRNA snRNA MGP_129S1SvImJ_T0054687.1 MGP_129S1SvImJ_G0025719.1 mouse_genomes_project 2 47957179 48045162 + MGP_129S1SvImJ_P0054687 Acvr2a protein_coding protein_coding MGP_129S1SvImJ_T0054688.1 MGP_129S1SvImJ_G0025719.1 mouse_genomes_project 2 48032275 48042141 + Acvr2a protein_coding processed_transcript MGP_129S1SvImJ_T0007240.1 MGP_129S1SvImJ_G0005940.1 mouse_genomes_project 2 74613404 74622161 - 4930441J16Rik lincRNA lincRNA MGP_129S1SvImJ_T0004172.1 MGP_129S1SvImJ_G0003689.1 mouse_genomes_project 2 169002335 169004793 + antisense antisense MGP_129S1SvImJ_T0004173.1 MGP_129S1SvImJ_G0003689.1 mouse_genomes_project 2 169002335 169004794 + antisense antisense MGP_129S1SvImJ_T0056591.1 MGP_129S1SvImJ_G0026239.1 mouse_genomes_project 2 111608364 111670072 + MGP_129S1SvImJ_P0056591 Kif18a protein_coding protein_coding MGP_129S1SvImJ_T0056592.1 MGP_129S1SvImJ_G0026239.1 mouse_genomes_project 2 111608452 111623687 + Kif18a protein_coding retained_intron MGP_129S1SvImJ_T0056593.1 MGP_129S1SvImJ_G0026239.1 mouse_genomes_project 2 111608466 111635102 + Kif18a protein_coding retained_intron MGP_129S1SvImJ_T0056594.1 MGP_129S1SvImJ_G0026239.1 mouse_genomes_project 2 111608478 111638435 + Kif18a protein_coding retained_intron MGP_129S1SvImJ_T0056595.1 MGP_129S1SvImJ_G0026239.1 mouse_genomes_project 2 111608495 111623419 + Kif18a protein_coding retained_intron MGP_129S1SvImJ_T0056596.1 MGP_129S1SvImJ_G0026239.1 mouse_genomes_project 2 111619649 111623687 + Kif18a protein_coding retained_intron MGP_129S1SvImJ_T0007241.1 MGP_129S1SvImJ_G0005941.1 mouse_genomes_project 2 75009695 75011537 + Gm14396 lincRNA lincRNA MGP_129S1SvImJ_T0007242.1 MGP_129S1SvImJ_G0005941.1 mouse_genomes_project 2 75009776 75011537 + Gm14396 lincRNA lincRNA MGP_129S1SvImJ_T0003980.1 MGP_129S1SvImJ_G0003552.1 mouse_genomes_project 2 33608299 33630328 + Gm13449 antisense antisense MGP_129S1SvImJ_T0058390.1 MGP_129S1SvImJ_G0026690.1 mouse_genomes_project 2 157858792 157890135 + MGP_129S1SvImJ_P0058390 Pofut1 protein_coding protein_coding MGP_129S1SvImJ_T0058391.1 MGP_129S1SvImJ_G0026690.1 mouse_genomes_project 2 157858800 157885861 + MGP_129S1SvImJ_P0058391 Pofut1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058392.1 MGP_129S1SvImJ_G0026690.1 mouse_genomes_project 2 157858800 157885861 + MGP_129S1SvImJ_P0058392 Pofut1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058393.1 MGP_129S1SvImJ_G0026690.1 mouse_genomes_project 2 157858810 157881117 + MGP_129S1SvImJ_P0058393 Pofut1 protein_coding protein_coding MGP_129S1SvImJ_T0058394.1 MGP_129S1SvImJ_G0026690.1 mouse_genomes_project 2 157858828 157869807 + Pofut1 protein_coding retained_intron MGP_129S1SvImJ_T0058395.1 MGP_129S1SvImJ_G0026690.1 mouse_genomes_project 2 157858837 157886391 + MGP_129S1SvImJ_P0058395 Pofut1 protein_coding protein_coding MGP_129S1SvImJ_T0058396.1 MGP_129S1SvImJ_G0026690.1 mouse_genomes_project 2 157876694 157887174 + MGP_129S1SvImJ_P0058396 Pofut1 protein_coding protein_coding MGP_129S1SvImJ_T0058397.1 MGP_129S1SvImJ_G0026690.1 mouse_genomes_project 2 157876784 157887951 + MGP_129S1SvImJ_P0058397 Pofut1 protein_coding protein_coding MGP_129S1SvImJ_T0055735.1 MGP_129S1SvImJ_G0025944.1 mouse_genomes_project 2 86688521 86689505 - MGP_129S1SvImJ_P0055735 Olfr1024 protein_coding protein_coding MGP_129S1SvImJ_T0058324.1 MGP_129S1SvImJ_G0026674.1 mouse_genomes_project 2 157240209 157283604 + MGP_129S1SvImJ_P0058324 H13 protein_coding protein_coding MGP_129S1SvImJ_T0058325.1 MGP_129S1SvImJ_G0026674.1 mouse_genomes_project 2 157240234 157255942 + H13 protein_coding retained_intron MGP_129S1SvImJ_T0058326.1 MGP_129S1SvImJ_G0026674.1 mouse_genomes_project 2 157240236 157280206 + MGP_129S1SvImJ_P0058326 H13 protein_coding protein_coding MGP_129S1SvImJ_T0058327.1 MGP_129S1SvImJ_G0026674.1 mouse_genomes_project 2 157240236 157259207 + MGP_129S1SvImJ_P0058327 H13 protein_coding protein_coding MGP_129S1SvImJ_T0058328.1 MGP_129S1SvImJ_G0026674.1 mouse_genomes_project 2 157240282 157279298 + MGP_129S1SvImJ_P0058328 H13 protein_coding protein_coding MGP_129S1SvImJ_T0058330.1 MGP_129S1SvImJ_G0026674.1 mouse_genomes_project 2 157264374 157268791 + H13 protein_coding retained_intron MGP_129S1SvImJ_T0007203.1 MGP_129S1SvImJ_G0005908.1 mouse_genomes_project 2 47213909 47613067 - lincRNA lincRNA MGP_129S1SvImJ_T0057495.1 MGP_129S1SvImJ_G0026459.1 mouse_genomes_project 2 130718044 130728925 + MGP_129S1SvImJ_P0057495 Gpat2 protein_coding protein_coding MGP_129S1SvImJ_T0055855.1 MGP_129S1SvImJ_G0026050.1 mouse_genomes_project 2 89497861 89498785 - MGP_129S1SvImJ_P0055855 Olfr1179 protein_coding protein_coding MGP_129S1SvImJ_T0055656.1 MGP_129S1SvImJ_G0025908.1 mouse_genomes_project 2 85424179 85428776 + MGP_129S1SvImJ_P0055656 Ypel4 protein_coding protein_coding MGP_129S1SvImJ_T0055657.1 MGP_129S1SvImJ_G0025908.1 mouse_genomes_project 2 85424219 85428776 + MGP_129S1SvImJ_P0055657 Ypel4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055658.1 MGP_129S1SvImJ_G0025908.1 mouse_genomes_project 2 85424244 85425748 + Ypel4 protein_coding processed_transcript MGP_129S1SvImJ_T0055659.1 MGP_129S1SvImJ_G0025908.1 mouse_genomes_project 2 85424348 85428770 + Ypel4 protein_coding retained_intron MGP_129S1SvImJ_T0053411.1 MGP_129S1SvImJ_G0025495.1 mouse_genomes_project 2 24644120 24647729 - MGP_129S1SvImJ_P0053411 Lcn4 protein_coding protein_coding MGP_129S1SvImJ_T0004147.1 MGP_129S1SvImJ_G0003668.1 mouse_genomes_project 2 157219716 157221155 - 1700030C14Rik antisense antisense MGP_129S1SvImJ_T0013806.1 MGP_129S1SvImJ_G0011895.1 mouse_genomes_project 2 147918518 147918849 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057948.1 MGP_129S1SvImJ_G0026562.1 mouse_genomes_project 2 140870665 140905837 - MGP_129S1SvImJ_P0057948 Jag1 protein_coding protein_coding MGP_129S1SvImJ_T0057949.1 MGP_129S1SvImJ_G0026562.1 mouse_genomes_project 2 140872080 140875138 - Jag1 protein_coding retained_intron MGP_129S1SvImJ_T0056096.1 MGP_129S1SvImJ_G0026147.1 mouse_genomes_project 2 92575250 92580860 + MGP_129S1SvImJ_P0056096 Pacsin3 protein_coding protein_coding MGP_129S1SvImJ_T0056097.1 MGP_129S1SvImJ_G0026147.1 mouse_genomes_project 2 92575411 92576425 + Pacsin3 protein_coding retained_intron MGP_129S1SvImJ_T0056098.1 MGP_129S1SvImJ_G0026147.1 mouse_genomes_project 2 92575440 92579832 + MGP_129S1SvImJ_P0056098 Pacsin3 protein_coding protein_coding MGP_129S1SvImJ_T0056099.1 MGP_129S1SvImJ_G0026147.1 mouse_genomes_project 2 92575458 92585540 + MGP_129S1SvImJ_P0056099 Pacsin3 protein_coding protein_coding MGP_129S1SvImJ_T0056100.1 MGP_129S1SvImJ_G0026147.1 mouse_genomes_project 2 92576109 92580537 + MGP_129S1SvImJ_P0056100 Pacsin3 protein_coding protein_coding MGP_129S1SvImJ_T0056101.1 MGP_129S1SvImJ_G0026147.1 mouse_genomes_project 2 92576109 92585539 + MGP_129S1SvImJ_P0056101 Pacsin3 protein_coding protein_coding MGP_129S1SvImJ_T0056102.1 MGP_129S1SvImJ_G0026147.1 mouse_genomes_project 2 92576109 92585540 + MGP_129S1SvImJ_P0056102 Pacsin3 protein_coding protein_coding MGP_129S1SvImJ_T0056103.1 MGP_129S1SvImJ_G0026147.1 mouse_genomes_project 2 92576134 92580626 + MGP_129S1SvImJ_P0056103 Pacsin3 protein_coding protein_coding MGP_129S1SvImJ_T0056104.1 MGP_129S1SvImJ_G0026147.1 mouse_genomes_project 2 92576625 92585540 + MGP_129S1SvImJ_P0056104 Pacsin3 protein_coding protein_coding MGP_129S1SvImJ_T0056105.1 MGP_129S1SvImJ_G0026147.1 mouse_genomes_project 2 92576631 92580592 + MGP_129S1SvImJ_P0056105 Pacsin3 protein_coding protein_coding MGP_129S1SvImJ_T0056106.1 MGP_129S1SvImJ_G0026147.1 mouse_genomes_project 2 92578496 92579520 + Pacsin3 protein_coding processed_transcript MGP_129S1SvImJ_T0056107.1 MGP_129S1SvImJ_G0026147.1 mouse_genomes_project 2 92579119 92580889 + MGP_129S1SvImJ_P0056107 Pacsin3 protein_coding protein_coding MGP_129S1SvImJ_T0056108.1 MGP_129S1SvImJ_G0026147.1 mouse_genomes_project 2 92580095 92580960 + Pacsin3 protein_coding retained_intron MGP_129S1SvImJ_T0056109.1 MGP_129S1SvImJ_G0026147.1 mouse_genomes_project 2 92583773 92584394 + Pacsin3 protein_coding retained_intron MGP_129S1SvImJ_T0056110.1 MGP_129S1SvImJ_G0026147.1 mouse_genomes_project 2 92583966 92585220 + MGP_129S1SvImJ_P0056110 Pacsin3 protein_coding protein_coding MGP_129S1SvImJ_T0059872.1 MGP_129S1SvImJ_G0027022.1 mouse_genomes_project 2 187969083 187972121 + MGP_129S1SvImJ_P0059872 Lime1 protein_coding protein_coding MGP_129S1SvImJ_T0059873.1 MGP_129S1SvImJ_G0027022.1 mouse_genomes_project 2 187970240 187972634 + MGP_129S1SvImJ_P0059873 Lime1 protein_coding protein_coding MGP_129S1SvImJ_T0059874.1 MGP_129S1SvImJ_G0027022.1 mouse_genomes_project 2 187970363 187972560 + Lime1 protein_coding retained_intron MGP_129S1SvImJ_T0059875.1 MGP_129S1SvImJ_G0027022.1 mouse_genomes_project 2 187970363 187971960 + Lime1 protein_coding retained_intron MGP_129S1SvImJ_T0059876.1 MGP_129S1SvImJ_G0027022.1 mouse_genomes_project 2 187970363 187972629 + MGP_129S1SvImJ_P0059876 Lime1 protein_coding protein_coding MGP_129S1SvImJ_T0059877.1 MGP_129S1SvImJ_G0027022.1 mouse_genomes_project 2 187970877 187972634 + MGP_129S1SvImJ_P0059877 Lime1 protein_coding protein_coding MGP_129S1SvImJ_T0059878.1 MGP_129S1SvImJ_G0027022.1 mouse_genomes_project 2 187971491 187972319 + Lime1 protein_coding retained_intron MGP_129S1SvImJ_T0054745.1 MGP_129S1SvImJ_G0025729.1 mouse_genomes_project 2 51223325 51233810 - MGP_129S1SvImJ_P0054745 Rbm43 protein_coding protein_coding MGP_129S1SvImJ_T0054746.1 MGP_129S1SvImJ_G0025729.1 mouse_genomes_project 2 51223325 51233966 - MGP_129S1SvImJ_P0054746 Rbm43 protein_coding protein_coding MGP_129S1SvImJ_T0054747.1 MGP_129S1SvImJ_G0025729.1 mouse_genomes_project 2 51223328 51233447 - MGP_129S1SvImJ_P0054747 Rbm43 protein_coding protein_coding MGP_129S1SvImJ_T0054748.1 MGP_129S1SvImJ_G0025729.1 mouse_genomes_project 2 51224259 51225889 - Rbm43 protein_coding processed_transcript MGP_129S1SvImJ_T0054749.1 MGP_129S1SvImJ_G0025729.1 mouse_genomes_project 2 51224524 51232180 - Rbm43 protein_coding processed_transcript MGP_129S1SvImJ_T0054750.1 MGP_129S1SvImJ_G0025729.1 mouse_genomes_project 2 51224743 51233477 - Rbm43 protein_coding processed_transcript MGP_129S1SvImJ_T0013698.1 MGP_129S1SvImJ_G0011787.1 mouse_genomes_project 2 103439897 103440108 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013534.1 MGP_129S1SvImJ_G0011623.1 mouse_genomes_project 2 47952622 47953593 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058638.1 MGP_129S1SvImJ_G0026749.1 mouse_genomes_project 2 160795101 160799425 - MGP_129S1SvImJ_P0058638 Gdf5 protein_coding protein_coding MGP_129S1SvImJ_T0013810.1 MGP_129S1SvImJ_G0011899.1 mouse_genomes_project 2 148449534 148450943 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001101.1 MGP_129S1SvImJ_G0001030.1 mouse_genomes_project 2 38539448 38544634 + TEC TEC MGP_129S1SvImJ_T0007224.1 MGP_129S1SvImJ_G0005927.1 mouse_genomes_project 2 67036170 67052628 + Gm1322 lincRNA lincRNA MGP_129S1SvImJ_T0004075.1 MGP_129S1SvImJ_G0003616.1 mouse_genomes_project 2 116166448 116183871 - 4930533B01Rik antisense antisense MGP_129S1SvImJ_T0052402.1 MGP_129S1SvImJ_G0025320.1 mouse_genomes_project 2 2113152 2131136 - Optn protein_coding processed_transcript MGP_129S1SvImJ_T0052403.1 MGP_129S1SvImJ_G0025320.1 mouse_genomes_project 2 2113152 2162588 - MGP_129S1SvImJ_P0052403 Optn protein_coding protein_coding MGP_129S1SvImJ_T0052404.1 MGP_129S1SvImJ_G0025320.1 mouse_genomes_project 2 2113154 2162481 - MGP_129S1SvImJ_P0052404 Optn protein_coding protein_coding MGP_129S1SvImJ_T0052405.1 MGP_129S1SvImJ_G0025320.1 mouse_genomes_project 2 2113811 2132430 - Optn protein_coding processed_transcript MGP_129S1SvImJ_T0052406.1 MGP_129S1SvImJ_G0025320.1 mouse_genomes_project 2 2141377 2162594 - Optn protein_coding processed_transcript MGP_129S1SvImJ_T0013577.1 MGP_129S1SvImJ_G0011666.1 mouse_genomes_project 2 60648247 60648867 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056938.1 MGP_129S1SvImJ_G0026353.1 mouse_genomes_project 2 122632500 122652838 + MGP_129S1SvImJ_P0056938 Tyro3 protein_coding protein_coding MGP_129S1SvImJ_T0056939.1 MGP_129S1SvImJ_G0026353.1 mouse_genomes_project 2 122633994 122640405 + Tyro3 protein_coding processed_transcript MGP_129S1SvImJ_T0056940.1 MGP_129S1SvImJ_G0026353.1 mouse_genomes_project 2 122634082 122638098 + Tyro3 protein_coding processed_transcript MGP_129S1SvImJ_T0056941.1 MGP_129S1SvImJ_G0026353.1 mouse_genomes_project 2 122634269 122652838 + MGP_129S1SvImJ_P0056941 Tyro3 protein_coding protein_coding MGP_129S1SvImJ_T0056942.1 MGP_129S1SvImJ_G0026353.1 mouse_genomes_project 2 122635870 122638056 + Tyro3 protein_coding processed_transcript MGP_129S1SvImJ_T0056943.1 MGP_129S1SvImJ_G0026353.1 mouse_genomes_project 2 122637849 122642741 + Tyro3 protein_coding retained_intron MGP_129S1SvImJ_T0056944.1 MGP_129S1SvImJ_G0026353.1 mouse_genomes_project 2 122643957 122652825 + Tyro3 protein_coding retained_intron MGP_129S1SvImJ_T0056945.1 MGP_129S1SvImJ_G0026353.1 mouse_genomes_project 2 122645587 122647133 + Tyro3 protein_coding retained_intron MGP_129S1SvImJ_T0056237.1 MGP_129S1SvImJ_G0026166.1 mouse_genomes_project 2 93813201 93814267 + 1700029I15Rik protein_coding retained_intron MGP_129S1SvImJ_T0056238.1 MGP_129S1SvImJ_G0026166.1 mouse_genomes_project 2 93813581 93814267 + MGP_129S1SvImJ_P0056238 1700029I15Rik protein_coding protein_coding MGP_129S1SvImJ_T0056239.1 MGP_129S1SvImJ_G0026166.1 mouse_genomes_project 2 93813581 93816372 + MGP_129S1SvImJ_P0056239 1700029I15Rik protein_coding protein_coding MGP_129S1SvImJ_T0056240.1 MGP_129S1SvImJ_G0026166.1 mouse_genomes_project 2 93813581 93814253 + MGP_129S1SvImJ_P0056240 1700029I15Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0007247.1 MGP_129S1SvImJ_G0005945.1 mouse_genomes_project 2 75468494 75484190 - Gm13652 lincRNA lincRNA MGP_129S1SvImJ_T0010467.1 MGP_129S1SvImJ_G0008583.1 mouse_genomes_project 2 124353644 124353745 - Gm22953 miRNA miRNA MGP_129S1SvImJ_T0100960.1 MGP_129S1SvImJ_G0039027.1 mouse_genomes_project 2 110149502 110149634 - Gm23439 snoRNA snoRNA MGP_129S1SvImJ_T0054144.1 MGP_129S1SvImJ_G0025610.1 mouse_genomes_project 2 31045301 31048023 + MGP_129S1SvImJ_P0054144 Dpm2 protein_coding protein_coding MGP_129S1SvImJ_T0054145.1 MGP_129S1SvImJ_G0025610.1 mouse_genomes_project 2 31045301 31048007 + MGP_129S1SvImJ_P0054145 Dpm2 protein_coding protein_coding MGP_129S1SvImJ_T0054146.1 MGP_129S1SvImJ_G0025610.1 mouse_genomes_project 2 31045310 31047525 + Dpm2 protein_coding retained_intron MGP_129S1SvImJ_T0054147.1 MGP_129S1SvImJ_G0025610.1 mouse_genomes_project 2 31046490 31047900 + Dpm2 protein_coding retained_intron MGP_129S1SvImJ_T0100934.1 MGP_129S1SvImJ_G0039001.1 mouse_genomes_project 2 41755666 41755798 + Gm24350 snoRNA snoRNA MGP_129S1SvImJ_T0013686.1 MGP_129S1SvImJ_G0011775.1 mouse_genomes_project 2 97279496 97279616 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010387.1 MGP_129S1SvImJ_G0008503.1 mouse_genomes_project 2 7878609 7878736 + Mir669i miRNA miRNA MGP_129S1SvImJ_T0007162.1 MGP_129S1SvImJ_G0005878.1 mouse_genomes_project 2 22976743 22999556 - Gm13387 lincRNA lincRNA MGP_129S1SvImJ_T0007163.1 MGP_129S1SvImJ_G0005878.1 mouse_genomes_project 2 22995958 22999556 - Gm13387 lincRNA lincRNA MGP_129S1SvImJ_T0007164.1 MGP_129S1SvImJ_G0005878.1 mouse_genomes_project 2 22997976 22999483 - Gm13387 lincRNA lincRNA MGP_129S1SvImJ_T0004088.1 MGP_129S1SvImJ_G0003625.1 mouse_genomes_project 2 124179665 124182005 - Gm14978 antisense antisense MGP_129S1SvImJ_T0004008.1 MGP_129S1SvImJ_G0003574.1 mouse_genomes_project 2 66032902 66037880 + Gm13618 antisense antisense MGP_129S1SvImJ_T0059445.1 MGP_129S1SvImJ_G0026922.1 mouse_genomes_project 2 174010534 174036884 - MGP_129S1SvImJ_P0059445 Adnp protein_coding protein_coding MGP_129S1SvImJ_T0059446.1 MGP_129S1SvImJ_G0026922.1 mouse_genomes_project 2 174010534 174037074 - MGP_129S1SvImJ_P0059446 Adnp protein_coding protein_coding MGP_129S1SvImJ_T0059448.1 MGP_129S1SvImJ_G0026922.1 mouse_genomes_project 2 174014510 174036671 - Adnp protein_coding processed_transcript MGP_129S1SvImJ_T0059449.1 MGP_129S1SvImJ_G0026922.1 mouse_genomes_project 2 174034318 174036671 - Adnp protein_coding retained_intron MGP_129S1SvImJ_T0053702.1 MGP_129S1SvImJ_G0025548.1 mouse_genomes_project 2 28107612 28147040 + MGP_129S1SvImJ_P0053702 Gle1 protein_coding protein_coding MGP_129S1SvImJ_T0053703.1 MGP_129S1SvImJ_G0025548.1 mouse_genomes_project 2 28107614 28117165 + Gle1 protein_coding retained_intron MGP_129S1SvImJ_T0053704.1 MGP_129S1SvImJ_G0025548.1 mouse_genomes_project 2 28107709 28117705 + Gle1 protein_coding retained_intron MGP_129S1SvImJ_T0053705.1 MGP_129S1SvImJ_G0025548.1 mouse_genomes_project 2 28122736 28124162 + Gle1 protein_coding retained_intron MGP_129S1SvImJ_T0053706.1 MGP_129S1SvImJ_G0025548.1 mouse_genomes_project 2 28123099 28125139 + Gle1 protein_coding retained_intron MGP_129S1SvImJ_T0053707.1 MGP_129S1SvImJ_G0025548.1 mouse_genomes_project 2 28129523 28131193 + Gle1 protein_coding retained_intron MGP_129S1SvImJ_T0053708.1 MGP_129S1SvImJ_G0025548.1 mouse_genomes_project 2 28142178 28144886 + Gle1 protein_coding retained_intron MGP_129S1SvImJ_T0059721.1 MGP_129S1SvImJ_G0026996.1 mouse_genomes_project 2 187111793 187116124 + MGP_129S1SvImJ_P0059721 Mrgbp protein_coding protein_coding MGP_129S1SvImJ_T0059722.1 MGP_129S1SvImJ_G0026996.1 mouse_genomes_project 2 187113201 187116777 + MGP_129S1SvImJ_P0059722 Mrgbp protein_coding protein_coding MGP_129S1SvImJ_T0059723.1 MGP_129S1SvImJ_G0026996.1 mouse_genomes_project 2 187113212 187116794 + Mrgbp protein_coding retained_intron MGP_129S1SvImJ_T0059724.1 MGP_129S1SvImJ_G0026996.1 mouse_genomes_project 2 187113215 187116794 + Mrgbp protein_coding retained_intron MGP_129S1SvImJ_T0059725.1 MGP_129S1SvImJ_G0026996.1 mouse_genomes_project 2 187113221 187116794 + Mrgbp protein_coding retained_intron MGP_129S1SvImJ_T0059726.1 MGP_129S1SvImJ_G0026996.1 mouse_genomes_project 2 187113247 187116794 + Mrgbp protein_coding retained_intron MGP_129S1SvImJ_T0052669.1 MGP_129S1SvImJ_G0025361.1 mouse_genomes_project 2 11684514 11731287 + MGP_129S1SvImJ_P0052669 Tmem236 protein_coding protein_coding MGP_129S1SvImJ_T0056728.1 MGP_129S1SvImJ_G0026303.1 mouse_genomes_project 2 116664346 116672356 - MGP_129S1SvImJ_P0056728 Zfp770 protein_coding protein_coding MGP_129S1SvImJ_T0056729.1 MGP_129S1SvImJ_G0026303.1 mouse_genomes_project 2 116669446 116672327 - Zfp770 protein_coding processed_transcript MGP_129S1SvImJ_T0098349.1 MGP_129S1SvImJ_G0036434.1 mouse_genomes_project 2 12124711 12125333 - pseudogene pseudogene MGP_129S1SvImJ_T0013730.1 MGP_129S1SvImJ_G0011819.1 mouse_genomes_project 2 112767473 112771171 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004110.1 MGP_129S1SvImJ_G0003642.1 mouse_genomes_project 2 135824625 135835306 + AV099323 antisense antisense MGP_129S1SvImJ_T0052674.1 MGP_129S1SvImJ_G0025364.1 mouse_genomes_project 2 12122618 12125335 + Cacnb2 protein_coding retained_intron MGP_129S1SvImJ_T0052675.1 MGP_129S1SvImJ_G0025364.1 mouse_genomes_project 2 12125027 12533321 + MGP_129S1SvImJ_P0052675 Cacnb2 protein_coding protein_coding MGP_129S1SvImJ_T0052676.1 MGP_129S1SvImJ_G0025364.1 mouse_genomes_project 2 12125843 12500580 + Cacnb2 protein_coding retained_intron MGP_129S1SvImJ_T0052677.1 MGP_129S1SvImJ_G0025364.1 mouse_genomes_project 2 12265224 12533320 + Cacnb2 protein_coding processed_transcript MGP_129S1SvImJ_T0052678.1 MGP_129S1SvImJ_G0025364.1 mouse_genomes_project 2 12291134 12501414 + Cacnb2 protein_coding retained_intron MGP_129S1SvImJ_T0052679.1 MGP_129S1SvImJ_G0025364.1 mouse_genomes_project 2 12363021 12511883 + Cacnb2 protein_coding retained_intron MGP_129S1SvImJ_T0052680.1 MGP_129S1SvImJ_G0025364.1 mouse_genomes_project 2 12363087 12527285 + MGP_129S1SvImJ_P0052680 Cacnb2 protein_coding protein_coding MGP_129S1SvImJ_T0052681.1 MGP_129S1SvImJ_G0025364.1 mouse_genomes_project 2 12414414 12511798 + Cacnb2 protein_coding retained_intron MGP_129S1SvImJ_T0052682.1 MGP_129S1SvImJ_G0025364.1 mouse_genomes_project 2 12414415 12511883 + Cacnb2 protein_coding retained_intron MGP_129S1SvImJ_T0052683.1 MGP_129S1SvImJ_G0025364.1 mouse_genomes_project 2 12414428 12527223 + MGP_129S1SvImJ_P0052683 Cacnb2 protein_coding protein_coding MGP_129S1SvImJ_T0052684.1 MGP_129S1SvImJ_G0025364.1 mouse_genomes_project 2 12414750 12503390 + Cacnb2 protein_coding retained_intron MGP_129S1SvImJ_T0052685.1 MGP_129S1SvImJ_G0025364.1 mouse_genomes_project 2 12415180 12442489 + MGP_129S1SvImJ_P0052685 Cacnb2 protein_coding protein_coding MGP_129S1SvImJ_T0052686.1 MGP_129S1SvImJ_G0025364.1 mouse_genomes_project 2 12415507 12505142 + Cacnb2 protein_coding retained_intron MGP_129S1SvImJ_T0052687.1 MGP_129S1SvImJ_G0025364.1 mouse_genomes_project 2 12415511 12532509 + Cacnb2 protein_coding retained_intron MGP_129S1SvImJ_T0052688.1 MGP_129S1SvImJ_G0025364.1 mouse_genomes_project 2 12500498 12520882 + MGP_129S1SvImJ_P0052688 Cacnb2 protein_coding protein_coding MGP_129S1SvImJ_T0052689.1 MGP_129S1SvImJ_G0025364.1 mouse_genomes_project 2 12522622 12524924 + Cacnb2 protein_coding retained_intron MGP_129S1SvImJ_T0013487.1 MGP_129S1SvImJ_G0011576.1 mouse_genomes_project 2 29213015 29213395 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059517.1 MGP_129S1SvImJ_G0026937.1 mouse_genomes_project 2 176635385 176660100 - MGP_129S1SvImJ_P0059517 4930470P17Rik protein_coding protein_coding MGP_129S1SvImJ_T0058314.1 MGP_129S1SvImJ_G0026667.1 mouse_genomes_project 2 157132957 157133158 + MGP_129S1SvImJ_P0058314 Gm17416 protein_coding protein_coding MGP_129S1SvImJ_T0102384.1 MGP_129S1SvImJ_G0040218.1 mouse_genomes_project 2 34983920 34984859 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0011523.1 MGP_129S1SvImJ_G0009639.1 mouse_genomes_project 2 72510524 72510832 + Zakit misc_RNA misc_RNA MGP_129S1SvImJ_T0013502.1 MGP_129S1SvImJ_G0011591.1 mouse_genomes_project 2 35590142 35590638 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098350.1 MGP_129S1SvImJ_G0036435.1 mouse_genomes_project 2 20629882 20630298 - pseudogene pseudogene MGP_129S1SvImJ_T0099694.1 MGP_129S1SvImJ_G0037761.1 mouse_genomes_project 2 128268480 128268587 + Gm22352 snRNA snRNA MGP_129S1SvImJ_T0056717.1 MGP_129S1SvImJ_G0026300.1 mouse_genomes_project 2 116481744 116485763 - MGP_129S1SvImJ_P0056717 Gjd2 protein_coding protein_coding MGP_129S1SvImJ_T0055933.1 MGP_129S1SvImJ_G0026114.1 mouse_genomes_project 2 91074378 91077692 + MGP_129S1SvImJ_P0055933 Olfr1257 protein_coding protein_coding MGP_129S1SvImJ_T0055934.1 MGP_129S1SvImJ_G0026114.1 mouse_genomes_project 2 91076728 91077744 + MGP_129S1SvImJ_P0055934 Olfr1257 protein_coding protein_coding MGP_129S1SvImJ_T0001072.1 MGP_129S1SvImJ_G0001001.1 mouse_genomes_project 2 12233662 12236336 + TEC TEC MGP_129S1SvImJ_T0007373.1 MGP_129S1SvImJ_G0006048.1 mouse_genomes_project 2 161342113 161344679 - Gm14225 lincRNA lincRNA MGP_129S1SvImJ_T0059515.1 MGP_129S1SvImJ_G0026936.1 mouse_genomes_project 2 176561699 176569117 + MGP_129S1SvImJ_P0059515 Pfdn4 protein_coding protein_coding MGP_129S1SvImJ_T0059516.1 MGP_129S1SvImJ_G0026936.1 mouse_genomes_project 2 176561700 176569330 + MGP_129S1SvImJ_P0059516 Pfdn4 protein_coding protein_coding MGP_129S1SvImJ_T0056359.1 MGP_129S1SvImJ_G0026191.1 mouse_genomes_project 2 103549098 103556913 + Traf6 protein_coding processed_transcript MGP_129S1SvImJ_T0056360.1 MGP_129S1SvImJ_G0026191.1 mouse_genomes_project 2 103549109 103572364 + MGP_129S1SvImJ_P0056360 Traf6 protein_coding protein_coding MGP_129S1SvImJ_T0056361.1 MGP_129S1SvImJ_G0026191.1 mouse_genomes_project 2 103554892 103560764 + Traf6 protein_coding processed_transcript MGP_129S1SvImJ_T0100952.1 MGP_129S1SvImJ_G0039019.1 mouse_genomes_project 2 92944172 92944283 + Snord67 snoRNA snoRNA MGP_129S1SvImJ_T0010486.1 MGP_129S1SvImJ_G0008602.1 mouse_genomes_project 2 162578192 162578279 - Gm23134 miRNA miRNA MGP_129S1SvImJ_T0055802.1 MGP_129S1SvImJ_G0026008.1 mouse_genomes_project 2 88478134 88479088 + MGP_129S1SvImJ_P0055802 Olfr1124 protein_coding protein_coding MGP_129S1SvImJ_T0059739.1 MGP_129S1SvImJ_G0027000.1 mouse_genomes_project 2 187194303 187241313 - MGP_129S1SvImJ_P0059739 Dido1 protein_coding protein_coding MGP_129S1SvImJ_T0059740.1 MGP_129S1SvImJ_G0027000.1 mouse_genomes_project 2 187205422 187248962 - MGP_129S1SvImJ_P0059740 Dido1 protein_coding protein_coding MGP_129S1SvImJ_T0059741.1 MGP_129S1SvImJ_G0027000.1 mouse_genomes_project 2 187205424 187212835 - MGP_129S1SvImJ_P0059741 Dido1 protein_coding protein_coding MGP_129S1SvImJ_T0059742.1 MGP_129S1SvImJ_G0027000.1 mouse_genomes_project 2 187206347 187241313 - MGP_129S1SvImJ_P0059742 Dido1 protein_coding protein_coding MGP_129S1SvImJ_T0059743.1 MGP_129S1SvImJ_G0027000.1 mouse_genomes_project 2 187217936 187248962 - MGP_129S1SvImJ_P0059743 Dido1 protein_coding protein_coding MGP_129S1SvImJ_T0059744.1 MGP_129S1SvImJ_G0027000.1 mouse_genomes_project 2 187217951 187241313 - MGP_129S1SvImJ_P0059744 Dido1 protein_coding protein_coding MGP_129S1SvImJ_T0059745.1 MGP_129S1SvImJ_G0027000.1 mouse_genomes_project 2 187224006 187240955 - Dido1 protein_coding processed_transcript MGP_129S1SvImJ_T0101673.1 MGP_129S1SvImJ_G0039694.1 mouse_genomes_project 2 107703931 107704321 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0053383.1 MGP_129S1SvImJ_G0025491.1 mouse_genomes_project 2 24539501 24550420 + MGP_129S1SvImJ_P0053383 Egfl7 protein_coding protein_coding MGP_129S1SvImJ_T0053384.1 MGP_129S1SvImJ_G0025491.1 mouse_genomes_project 2 24540543 24553720 + MGP_129S1SvImJ_P0053384 Egfl7 protein_coding protein_coding MGP_129S1SvImJ_T0053385.1 MGP_129S1SvImJ_G0025491.1 mouse_genomes_project 2 24543362 24553717 + MGP_129S1SvImJ_P0053385 Egfl7 protein_coding protein_coding MGP_129S1SvImJ_T0053386.1 MGP_129S1SvImJ_G0025491.1 mouse_genomes_project 2 24543378 24553718 + MGP_129S1SvImJ_P0053386 Egfl7 protein_coding protein_coding MGP_129S1SvImJ_T0053387.1 MGP_129S1SvImJ_G0025491.1 mouse_genomes_project 2 24543403 24554156 + MGP_129S1SvImJ_P0053387 Egfl7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053388.1 MGP_129S1SvImJ_G0025491.1 mouse_genomes_project 2 24547665 24553717 + MGP_129S1SvImJ_P0053388 Egfl7 protein_coding protein_coding MGP_129S1SvImJ_T0053390.1 MGP_129S1SvImJ_G0025491.1 mouse_genomes_project 2 24547696 24551944 + Egfl7 protein_coding processed_transcript MGP_129S1SvImJ_T0053391.1 MGP_129S1SvImJ_G0025491.1 mouse_genomes_project 2 24547707 24551975 + MGP_129S1SvImJ_P0053391 Egfl7 protein_coding protein_coding MGP_129S1SvImJ_T0053392.1 MGP_129S1SvImJ_G0025491.1 mouse_genomes_project 2 24547724 24551525 + MGP_129S1SvImJ_P0053392 Egfl7 protein_coding protein_coding MGP_129S1SvImJ_T0053393.1 MGP_129S1SvImJ_G0025491.1 mouse_genomes_project 2 24549578 24553479 + MGP_129S1SvImJ_P0053393 Egfl7 protein_coding protein_coding MGP_129S1SvImJ_T0053394.1 MGP_129S1SvImJ_G0025491.1 mouse_genomes_project 2 24550370 24552599 + Egfl7 protein_coding retained_intron MGP_129S1SvImJ_T0053395.1 MGP_129S1SvImJ_G0025491.1 mouse_genomes_project 2 24551555 24552008 + Egfl7 protein_coding retained_intron MGP_129S1SvImJ_T0053396.1 MGP_129S1SvImJ_G0025491.1 mouse_genomes_project 2 24552000 24553712 + MGP_129S1SvImJ_P0053396 Egfl7 protein_coding protein_coding MGP_129S1SvImJ_T0053397.1 MGP_129S1SvImJ_G0025491.1 mouse_genomes_project 2 24552064 24553718 + MGP_129S1SvImJ_P0053397 Egfl7 protein_coding protein_coding MGP_129S1SvImJ_T0053398.1 MGP_129S1SvImJ_G0025491.1 mouse_genomes_project 2 24552469 24553718 + MGP_129S1SvImJ_P0053398 Egfl7 protein_coding protein_coding MGP_129S1SvImJ_T0053399.1 MGP_129S1SvImJ_G0025491.1 mouse_genomes_project 2 24552470 24553718 + MGP_129S1SvImJ_P0053399 Egfl7 protein_coding protein_coding MGP_129S1SvImJ_T0053400.1 MGP_129S1SvImJ_G0025491.1 mouse_genomes_project 2 24552481 24553326 + Egfl7 protein_coding retained_intron MGP_129S1SvImJ_T0053401.1 MGP_129S1SvImJ_G0025491.1 mouse_genomes_project 2 24553058 24553717 + Egfl7 protein_coding processed_transcript MGP_129S1SvImJ_T0053402.1 MGP_129S1SvImJ_G0025491.1 mouse_genomes_project 2 24553182 24553718 + Egfl7 protein_coding retained_intron MGP_129S1SvImJ_T0013770.1 MGP_129S1SvImJ_G0011859.1 mouse_genomes_project 2 133162248 133164050 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053121.1 MGP_129S1SvImJ_G0025442.1 mouse_genomes_project 2 23255137 23261034 + MGP_129S1SvImJ_P0053121 Sapcd2 protein_coding protein_coding MGP_129S1SvImJ_T0053122.1 MGP_129S1SvImJ_G0025442.1 mouse_genomes_project 2 23255146 23259624 + MGP_129S1SvImJ_P0053122 Sapcd2 protein_coding protein_coding MGP_129S1SvImJ_T0053123.1 MGP_129S1SvImJ_G0025442.1 mouse_genomes_project 2 23255150 23259624 + MGP_129S1SvImJ_P0053123 Sapcd2 protein_coding protein_coding MGP_129S1SvImJ_T0053124.1 MGP_129S1SvImJ_G0025442.1 mouse_genomes_project 2 23255176 23257963 + Sapcd2 protein_coding processed_transcript MGP_129S1SvImJ_T0053125.1 MGP_129S1SvImJ_G0025442.1 mouse_genomes_project 2 23257841 23259093 + Sapcd2 protein_coding processed_transcript MGP_129S1SvImJ_T0053126.1 MGP_129S1SvImJ_G0025442.1 mouse_genomes_project 2 23258594 23259598 + Sapcd2 protein_coding processed_transcript MGP_129S1SvImJ_T0053127.1 MGP_129S1SvImJ_G0025442.1 mouse_genomes_project 2 23258780 23259621 + Sapcd2 protein_coding processed_transcript MGP_129S1SvImJ_T0055745.1 MGP_129S1SvImJ_G0025953.1 mouse_genomes_project 2 86883375 86884096 + MGP_129S1SvImJ_P0055745 Olfr1036 protein_coding protein_coding MGP_129S1SvImJ_T0102401.1 MGP_129S1SvImJ_G0040235.1 mouse_genomes_project 2 86429592 86430046 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0055103.1 MGP_129S1SvImJ_G0025793.1 mouse_genomes_project 2 68780278 69038614 + MGP_129S1SvImJ_P0055103 Cers6 protein_coding protein_coding MGP_129S1SvImJ_T0055104.1 MGP_129S1SvImJ_G0025793.1 mouse_genomes_project 2 68780279 68781562 + Cers6 protein_coding retained_intron MGP_129S1SvImJ_T0055105.1 MGP_129S1SvImJ_G0025793.1 mouse_genomes_project 2 68780287 68995193 + Cers6 protein_coding retained_intron MGP_129S1SvImJ_T0055106.1 MGP_129S1SvImJ_G0025793.1 mouse_genomes_project 2 68780307 68850564 + Cers6 protein_coding retained_intron MGP_129S1SvImJ_T0055107.1 MGP_129S1SvImJ_G0025793.1 mouse_genomes_project 2 68780423 69033098 + MGP_129S1SvImJ_P0055107 Cers6 protein_coding protein_coding MGP_129S1SvImJ_T0055108.1 MGP_129S1SvImJ_G0025793.1 mouse_genomes_project 2 68864227 68974467 + Cers6 protein_coding retained_intron MGP_129S1SvImJ_T0055109.1 MGP_129S1SvImJ_G0025793.1 mouse_genomes_project 2 68878657 68974823 + Cers6 protein_coding retained_intron MGP_129S1SvImJ_T0003936.1 MGP_129S1SvImJ_G0003520.1 mouse_genomes_project 2 23159090 23166796 + Grin1os antisense antisense MGP_129S1SvImJ_T0004137.1 MGP_129S1SvImJ_G0003659.1 mouse_genomes_project 2 151446809 151610663 + antisense antisense MGP_129S1SvImJ_T0058191.1 MGP_129S1SvImJ_G0026631.1 mouse_genomes_project 2 155231830 155276210 + MGP_129S1SvImJ_P0058191 Pygb protein_coding protein_coding MGP_129S1SvImJ_T0058192.1 MGP_129S1SvImJ_G0026631.1 mouse_genomes_project 2 155234097 155259210 + Pygb protein_coding processed_transcript MGP_129S1SvImJ_T0058193.1 MGP_129S1SvImJ_G0026631.1 mouse_genomes_project 2 155260529 155262968 + Pygb protein_coding retained_intron MGP_129S1SvImJ_T0058194.1 MGP_129S1SvImJ_G0026631.1 mouse_genomes_project 2 155268060 155272925 + Pygb protein_coding retained_intron MGP_129S1SvImJ_T0058195.1 MGP_129S1SvImJ_G0026631.1 mouse_genomes_project 2 155272839 155275086 + Pygb protein_coding retained_intron MGP_129S1SvImJ_T0010492.1 MGP_129S1SvImJ_G0008608.1 mouse_genomes_project 2 168399487 168399612 + Gm22174 miRNA miRNA MGP_129S1SvImJ_T0017766.1 MGP_129S1SvImJ_G0015395.1 mouse_genomes_project 2 12027974 12057038 + Gm13266 processed_transcript lincRNA MGP_129S1SvImJ_T0017767.1 MGP_129S1SvImJ_G0015395.1 mouse_genomes_project 2 12027974 12050014 + Gm13266 processed_transcript retained_intron MGP_129S1SvImJ_T0017768.1 MGP_129S1SvImJ_G0015395.1 mouse_genomes_project 2 12027982 12049834 + Gm13266 processed_transcript lincRNA MGP_129S1SvImJ_T0098572.1 MGP_129S1SvImJ_G0036657.1 mouse_genomes_project 2 169549022 169549140 - n-R5s207 rRNA rRNA MGP_129S1SvImJ_T0055885.1 MGP_129S1SvImJ_G0026077.1 mouse_genomes_project 2 90179209 90180148 - MGP_129S1SvImJ_P0055885 Olfr1215 protein_coding protein_coding MGP_129S1SvImJ_T0053746.1 MGP_129S1SvImJ_G0025554.1 mouse_genomes_project 2 28303681 28330985 - MGP_129S1SvImJ_P0053746 Zer1 protein_coding protein_coding MGP_129S1SvImJ_T0053747.1 MGP_129S1SvImJ_G0025554.1 mouse_genomes_project 2 28303681 28330838 - MGP_129S1SvImJ_P0053747 Zer1 protein_coding protein_coding MGP_129S1SvImJ_T0053748.1 MGP_129S1SvImJ_G0025554.1 mouse_genomes_project 2 28306180 28308151 - Zer1 protein_coding retained_intron MGP_129S1SvImJ_T0053749.1 MGP_129S1SvImJ_G0025554.1 mouse_genomes_project 2 28306836 28309120 - Zer1 protein_coding retained_intron MGP_129S1SvImJ_T0053750.1 MGP_129S1SvImJ_G0025554.1 mouse_genomes_project 2 28311680 28330988 - Zer1 protein_coding retained_intron MGP_129S1SvImJ_T0053751.1 MGP_129S1SvImJ_G0025554.1 mouse_genomes_project 2 28311941 28330982 - Zer1 protein_coding retained_intron MGP_129S1SvImJ_T0053752.1 MGP_129S1SvImJ_G0025554.1 mouse_genomes_project 2 28313172 28317146 - Zer1 protein_coding retained_intron MGP_129S1SvImJ_T0053753.1 MGP_129S1SvImJ_G0025554.1 mouse_genomes_project 2 28313549 28314015 - Zer1 protein_coding processed_transcript MGP_129S1SvImJ_T0053754.1 MGP_129S1SvImJ_G0025554.1 mouse_genomes_project 2 28313887 28314915 - Zer1 protein_coding retained_intron MGP_129S1SvImJ_T0017842.1 MGP_129S1SvImJ_G0015444.1 mouse_genomes_project 2 93839528 93862931 + D930015M05Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0013590.1 MGP_129S1SvImJ_G0011679.1 mouse_genomes_project 2 66382791 66383932 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058267.1 MGP_129S1SvImJ_G0026648.1 mouse_genomes_project 2 156482783 156493592 - MGP_129S1SvImJ_P0058267 Fam110a protein_coding protein_coding MGP_129S1SvImJ_T0058268.1 MGP_129S1SvImJ_G0026648.1 mouse_genomes_project 2 156482783 156487303 - MGP_129S1SvImJ_P0058268 Fam110a protein_coding protein_coding MGP_129S1SvImJ_T0058269.1 MGP_129S1SvImJ_G0026648.1 mouse_genomes_project 2 156482783 156487334 - MGP_129S1SvImJ_P0058269 Fam110a protein_coding protein_coding MGP_129S1SvImJ_T0058270.1 MGP_129S1SvImJ_G0026648.1 mouse_genomes_project 2 156483122 156486784 - MGP_129S1SvImJ_P0058270 Fam110a protein_coding protein_coding MGP_129S1SvImJ_T0057221.1 MGP_129S1SvImJ_G0026394.1 mouse_genomes_project 2 124352150 124356289 + MGP_129S1SvImJ_P0057221 Serf2 protein_coding protein_coding MGP_129S1SvImJ_T0057222.1 MGP_129S1SvImJ_G0026394.1 mouse_genomes_project 2 124352323 124355874 + Serf2 protein_coding retained_intron MGP_129S1SvImJ_T0057223.1 MGP_129S1SvImJ_G0026394.1 mouse_genomes_project 2 124352333 124354265 + MGP_129S1SvImJ_P0057223 Serf2 protein_coding protein_coding MGP_129S1SvImJ_T0057224.1 MGP_129S1SvImJ_G0026394.1 mouse_genomes_project 2 124352338 124354029 + MGP_129S1SvImJ_P0057224 Serf2 protein_coding protein_coding MGP_129S1SvImJ_T0057225.1 MGP_129S1SvImJ_G0026394.1 mouse_genomes_project 2 124352367 124361228 + MGP_129S1SvImJ_P0057225 Serf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057226.1 MGP_129S1SvImJ_G0026394.1 mouse_genomes_project 2 124352367 124361226 + MGP_129S1SvImJ_P0057226 Serf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054487.1 MGP_129S1SvImJ_G0025672.1 mouse_genomes_project 2 35418514 35419453 + MGP_129S1SvImJ_P0054487 Olfr347 protein_coding protein_coding MGP_129S1SvImJ_T0007421.1 MGP_129S1SvImJ_G0006089.1 mouse_genomes_project 2 175372818 175379262 + Gm14250 lincRNA lincRNA MGP_129S1SvImJ_T0058945.1 MGP_129S1SvImJ_G0026799.1 mouse_genomes_project 2 163758051 163857221 + Ppp1r16b protein_coding retained_intron MGP_129S1SvImJ_T0058946.1 MGP_129S1SvImJ_G0026799.1 mouse_genomes_project 2 163758051 163865416 + MGP_129S1SvImJ_P0058946 Ppp1r16b protein_coding protein_coding MGP_129S1SvImJ_T0058947.1 MGP_129S1SvImJ_G0026799.1 mouse_genomes_project 2 163759386 163865416 + MGP_129S1SvImJ_P0058947 Ppp1r16b protein_coding protein_coding MGP_129S1SvImJ_T0058948.1 MGP_129S1SvImJ_G0026799.1 mouse_genomes_project 2 163759772 163865416 + MGP_129S1SvImJ_P0058948 Ppp1r16b protein_coding protein_coding MGP_129S1SvImJ_T0058949.1 MGP_129S1SvImJ_G0026799.1 mouse_genomes_project 2 163790114 163865416 + MGP_129S1SvImJ_P0058949 Ppp1r16b protein_coding protein_coding MGP_129S1SvImJ_T0054421.1 MGP_129S1SvImJ_G0025652.1 mouse_genomes_project 2 33945533 33968520 - MGP_129S1SvImJ_P0054421 Stom protein_coding protein_coding MGP_129S1SvImJ_T0054422.1 MGP_129S1SvImJ_G0025652.1 mouse_genomes_project 2 33946888 33952053 - Stom protein_coding retained_intron MGP_129S1SvImJ_T0013597.1 MGP_129S1SvImJ_G0011686.1 mouse_genomes_project 2 69720609 69720991 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017866.1 MGP_129S1SvImJ_G0015456.1 mouse_genomes_project 2 116485745 116500195 + A530058N18Rik processed_transcript antisense MGP_129S1SvImJ_T0017867.1 MGP_129S1SvImJ_G0015456.1 mouse_genomes_project 2 116485853 116504441 + A530058N18Rik processed_transcript antisense MGP_129S1SvImJ_T0017868.1 MGP_129S1SvImJ_G0015456.1 mouse_genomes_project 2 116485854 116503732 + A530058N18Rik processed_transcript antisense MGP_129S1SvImJ_T0017869.1 MGP_129S1SvImJ_G0015456.1 mouse_genomes_project 2 116485856 116504254 + A530058N18Rik processed_transcript antisense MGP_129S1SvImJ_T0017870.1 MGP_129S1SvImJ_G0015456.1 mouse_genomes_project 2 116485869 116492817 + A530058N18Rik processed_transcript retained_intron MGP_129S1SvImJ_T0017871.1 MGP_129S1SvImJ_G0015456.1 mouse_genomes_project 2 116485887 116489657 + A530058N18Rik processed_transcript antisense MGP_129S1SvImJ_T0017872.1 MGP_129S1SvImJ_G0015456.1 mouse_genomes_project 2 116485888 116503600 + A530058N18Rik processed_transcript antisense MGP_129S1SvImJ_T0057238.1 MGP_129S1SvImJ_G0026397.1 mouse_genomes_project 2 124365727 124389592 - MGP_129S1SvImJ_P0057238 protein_coding protein_coding MGP_129S1SvImJ_T0010501.1 MGP_129S1SvImJ_G0008617.1 mouse_genomes_project 2 180592854 180592922 + Gm27591 miRNA miRNA MGP_129S1SvImJ_T0013868.1 MGP_129S1SvImJ_G0011957.1 mouse_genomes_project 2 166712377 166712853 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053414.1 MGP_129S1SvImJ_G0025497.1 mouse_genomes_project 2 24860378 24864355 - Surf6 protein_coding processed_transcript MGP_129S1SvImJ_T0053415.1 MGP_129S1SvImJ_G0025497.1 mouse_genomes_project 2 24860675 24863917 - Surf6 protein_coding processed_transcript MGP_129S1SvImJ_T0053416.1 MGP_129S1SvImJ_G0025497.1 mouse_genomes_project 2 24860739 24871068 - Surf6 protein_coding processed_transcript MGP_129S1SvImJ_T0053417.1 MGP_129S1SvImJ_G0025497.1 mouse_genomes_project 2 24862178 24874522 - MGP_129S1SvImJ_P0053417 Surf6 protein_coding protein_coding MGP_129S1SvImJ_T0053418.1 MGP_129S1SvImJ_G0025497.1 mouse_genomes_project 2 24862515 24874493 - MGP_129S1SvImJ_P0053418 Surf6 protein_coding protein_coding MGP_129S1SvImJ_T0053419.1 MGP_129S1SvImJ_G0025497.1 mouse_genomes_project 2 24864418 24874433 - Surf6 protein_coding processed_transcript MGP_129S1SvImJ_T0053420.1 MGP_129S1SvImJ_G0025497.1 mouse_genomes_project 2 24870736 24871411 - Surf6 protein_coding processed_transcript MGP_129S1SvImJ_T0100943.1 MGP_129S1SvImJ_G0039010.1 mouse_genomes_project 2 60912045 60912177 + Gm26422 snoRNA snoRNA MGP_129S1SvImJ_T0013630.1 MGP_129S1SvImJ_G0011719.1 mouse_genomes_project 2 80708258 80709081 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054929.1 MGP_129S1SvImJ_G0025763.1 mouse_genomes_project 2 60198892 60274967 - MGP_129S1SvImJ_P0054929 Itgb6 protein_coding protein_coding MGP_129S1SvImJ_T0054930.1 MGP_129S1SvImJ_G0025763.1 mouse_genomes_project 2 60200835 60329044 - MGP_129S1SvImJ_P0054930 Itgb6 protein_coding protein_coding MGP_129S1SvImJ_T0054931.1 MGP_129S1SvImJ_G0025763.1 mouse_genomes_project 2 60204849 60329044 - MGP_129S1SvImJ_P0054931 Itgb6 protein_coding protein_coding MGP_129S1SvImJ_T0054932.1 MGP_129S1SvImJ_G0025763.1 mouse_genomes_project 2 60205743 60274982 - MGP_129S1SvImJ_P0054932 Itgb6 protein_coding protein_coding MGP_129S1SvImJ_T0054933.1 MGP_129S1SvImJ_G0025763.1 mouse_genomes_project 2 60236937 60274949 - Itgb6 protein_coding processed_transcript MGP_129S1SvImJ_T0054934.1 MGP_129S1SvImJ_G0025763.1 mouse_genomes_project 2 60255624 60275010 - Itgb6 protein_coding processed_transcript MGP_129S1SvImJ_T0054935.1 MGP_129S1SvImJ_G0025763.1 mouse_genomes_project 2 60270511 60274959 - Itgb6 protein_coding processed_transcript MGP_129S1SvImJ_T0054936.1 MGP_129S1SvImJ_G0025763.1 mouse_genomes_project 2 60275898 60309915 - Itgb6 protein_coding processed_transcript MGP_129S1SvImJ_T0054937.1 MGP_129S1SvImJ_G0025763.1 mouse_genomes_project 2 60297774 60309892 - Itgb6 protein_coding processed_transcript MGP_129S1SvImJ_T0010405.1 MGP_129S1SvImJ_G0008521.1 mouse_genomes_project 2 26813115 26813189 + Mir3088 miRNA miRNA MGP_129S1SvImJ_T0003982.1 MGP_129S1SvImJ_G0003554.1 mouse_genomes_project 2 37026931 37028916 + Gm13556 antisense antisense MGP_129S1SvImJ_T0055909.1 MGP_129S1SvImJ_G0026097.1 mouse_genomes_project 2 90637229 90638174 - MGP_129S1SvImJ_P0055909 Olfr1240 protein_coding protein_coding MGP_129S1SvImJ_T0003973.1 MGP_129S1SvImJ_G0003548.1 mouse_genomes_project 2 31970161 31972567 + Gm13536 antisense antisense MGP_129S1SvImJ_T0102447.1 MGP_129S1SvImJ_G0040281.1 mouse_genomes_project 2 158760891 158765254 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0007445.1 MGP_129S1SvImJ_G0006111.1 mouse_genomes_project 2 187460574 187461690 + Gm27032 lincRNA lincRNA MGP_129S1SvImJ_T0057879.1 MGP_129S1SvImJ_G0026547.1 mouse_genomes_project 2 136443985 136473566 + MGP_129S1SvImJ_P0057879 Mcm8 protein_coding protein_coding MGP_129S1SvImJ_T0057880.1 MGP_129S1SvImJ_G0026547.1 mouse_genomes_project 2 136443985 136473265 + MGP_129S1SvImJ_P0057880 Mcm8 protein_coding protein_coding MGP_129S1SvImJ_T0057881.1 MGP_129S1SvImJ_G0026547.1 mouse_genomes_project 2 136444068 136445869 + Mcm8 protein_coding processed_transcript MGP_129S1SvImJ_T0007430.1 MGP_129S1SvImJ_G0006097.1 mouse_genomes_project 2 177321921 177324369 + Gm14640 lincRNA lincRNA MGP_129S1SvImJ_T0017800.1 MGP_129S1SvImJ_G0015415.1 mouse_genomes_project 2 34890491 34892400 + Gm13429 processed_transcript processed_transcript MGP_129S1SvImJ_T0017801.1 MGP_129S1SvImJ_G0015415.1 mouse_genomes_project 2 34890962 34901035 + Gm13429 processed_transcript processed_transcript MGP_129S1SvImJ_T0017802.1 MGP_129S1SvImJ_G0015415.1 mouse_genomes_project 2 34898903 34901034 + Gm13429 processed_transcript processed_transcript MGP_129S1SvImJ_T0010347.1 MGP_129S1SvImJ_G0008463.1 mouse_genomes_project 2 2719925 2720005 + Gm27506 miRNA miRNA MGP_129S1SvImJ_T0057950.1 MGP_129S1SvImJ_G0026563.1 mouse_genomes_project 2 142085352 142376465 + Btbd3 protein_coding processed_transcript MGP_129S1SvImJ_T0057951.1 MGP_129S1SvImJ_G0026563.1 mouse_genomes_project 2 142085360 142417693 + Btbd3 protein_coding processed_transcript MGP_129S1SvImJ_T0057952.1 MGP_129S1SvImJ_G0026563.1 mouse_genomes_project 2 142107193 142114131 + MGP_129S1SvImJ_P0057952 Btbd3 protein_coding protein_coding MGP_129S1SvImJ_T0056656.1 MGP_129S1SvImJ_G0026271.1 mouse_genomes_project 2 114217446 114218385 + MGP_129S1SvImJ_P0056656 Olfr1301 protein_coding protein_coding MGP_129S1SvImJ_T0007427.1 MGP_129S1SvImJ_G0006094.1 mouse_genomes_project 2 176215450 176217055 - Gm17619 lincRNA lincRNA MGP_129S1SvImJ_T0017821.1 MGP_129S1SvImJ_G0015429.1 mouse_genomes_project 2 74997647 75008370 + Gm28309 processed_transcript processed_transcript MGP_129S1SvImJ_T0059164.1 MGP_129S1SvImJ_G0026863.1 mouse_genomes_project 2 170130946 170137904 - MGP_129S1SvImJ_P0059164 Wfdc9 protein_coding protein_coding MGP_129S1SvImJ_T0059165.1 MGP_129S1SvImJ_G0026863.1 mouse_genomes_project 2 170131102 170133080 - MGP_129S1SvImJ_P0059165 Wfdc9 protein_coding protein_coding MGP_129S1SvImJ_T0004044.1 MGP_129S1SvImJ_G0003597.1 mouse_genomes_project 2 77906212 77928585 + Gm13944 antisense antisense MGP_129S1SvImJ_T0004045.1 MGP_129S1SvImJ_G0003597.1 mouse_genomes_project 2 77906220 77928930 + Gm13944 antisense antisense MGP_129S1SvImJ_T0058331.1 MGP_129S1SvImJ_G0026676.1 mouse_genomes_project 2 157311928 157313087 + MGP_129S1SvImJ_P0058331 Id1 protein_coding protein_coding MGP_129S1SvImJ_T0058332.1 MGP_129S1SvImJ_G0026676.1 mouse_genomes_project 2 157311928 157313087 + MGP_129S1SvImJ_P0058332 Id1 protein_coding protein_coding MGP_129S1SvImJ_T0056195.1 MGP_129S1SvImJ_G0026163.1 mouse_genomes_project 2 93599358 93792493 + MGP_129S1SvImJ_P0056195 Phf21a protein_coding protein_coding MGP_129S1SvImJ_T0056196.1 MGP_129S1SvImJ_G0026163.1 mouse_genomes_project 2 93599427 93792499 + MGP_129S1SvImJ_P0056196 Phf21a protein_coding protein_coding MGP_129S1SvImJ_T0056197.1 MGP_129S1SvImJ_G0026163.1 mouse_genomes_project 2 93599520 93636646 + Phf21a protein_coding processed_transcript MGP_129S1SvImJ_T0056198.1 MGP_129S1SvImJ_G0026163.1 mouse_genomes_project 2 93599528 93747850 + MGP_129S1SvImJ_P0056198 Phf21a protein_coding protein_coding MGP_129S1SvImJ_T0056199.1 MGP_129S1SvImJ_G0026163.1 mouse_genomes_project 2 93599528 93791557 + MGP_129S1SvImJ_P0056199 Phf21a protein_coding protein_coding MGP_129S1SvImJ_T0056200.1 MGP_129S1SvImJ_G0026163.1 mouse_genomes_project 2 93599554 93637155 + Phf21a protein_coding retained_intron MGP_129S1SvImJ_T0056201.1 MGP_129S1SvImJ_G0026163.1 mouse_genomes_project 2 93599554 93644130 + MGP_129S1SvImJ_P0056201 Phf21a protein_coding protein_coding MGP_129S1SvImJ_T0056202.1 MGP_129S1SvImJ_G0026163.1 mouse_genomes_project 2 93600801 93644133 + MGP_129S1SvImJ_P0056202 Phf21a protein_coding protein_coding MGP_129S1SvImJ_T0056203.1 MGP_129S1SvImJ_G0026163.1 mouse_genomes_project 2 93600825 93791565 + MGP_129S1SvImJ_P0056203 Phf21a protein_coding protein_coding MGP_129S1SvImJ_T0056204.1 MGP_129S1SvImJ_G0026163.1 mouse_genomes_project 2 93601807 93644145 + MGP_129S1SvImJ_P0056204 Phf21a protein_coding protein_coding MGP_129S1SvImJ_T0056205.1 MGP_129S1SvImJ_G0026163.1 mouse_genomes_project 2 93636605 93651016 + MGP_129S1SvImJ_P0056205 Phf21a protein_coding protein_coding MGP_129S1SvImJ_T0056206.1 MGP_129S1SvImJ_G0026163.1 mouse_genomes_project 2 93643989 93795330 + MGP_129S1SvImJ_P0056206 Phf21a protein_coding protein_coding MGP_129S1SvImJ_T0056207.1 MGP_129S1SvImJ_G0026163.1 mouse_genomes_project 2 93643989 93795330 + MGP_129S1SvImJ_P0056207 Phf21a protein_coding protein_coding MGP_129S1SvImJ_T0056208.1 MGP_129S1SvImJ_G0026163.1 mouse_genomes_project 2 93643989 93795330 + MGP_129S1SvImJ_P0056208 Phf21a protein_coding protein_coding MGP_129S1SvImJ_T0056209.1 MGP_129S1SvImJ_G0026163.1 mouse_genomes_project 2 93643989 93795330 + MGP_129S1SvImJ_P0056209 Phf21a protein_coding protein_coding MGP_129S1SvImJ_T0056210.1 MGP_129S1SvImJ_G0026163.1 mouse_genomes_project 2 93644102 93795330 + MGP_129S1SvImJ_P0056210 Phf21a protein_coding protein_coding MGP_129S1SvImJ_T0056211.1 MGP_129S1SvImJ_G0026163.1 mouse_genomes_project 2 93644110 93754648 + MGP_129S1SvImJ_P0056211 Phf21a protein_coding protein_coding MGP_129S1SvImJ_T0056212.1 MGP_129S1SvImJ_G0026163.1 mouse_genomes_project 2 93651019 93791094 + MGP_129S1SvImJ_P0056212 Phf21a protein_coding protein_coding MGP_129S1SvImJ_T0056213.1 MGP_129S1SvImJ_G0026163.1 mouse_genomes_project 2 93748009 93758234 + MGP_129S1SvImJ_P0056213 Phf21a protein_coding protein_coding MGP_129S1SvImJ_T0056214.1 MGP_129S1SvImJ_G0026163.1 mouse_genomes_project 2 93758262 93789841 + MGP_129S1SvImJ_P0056214 Phf21a protein_coding protein_coding MGP_129S1SvImJ_T0056215.1 MGP_129S1SvImJ_G0026163.1 mouse_genomes_project 2 93779574 93787657 + Phf21a protein_coding retained_intron MGP_129S1SvImJ_T0055945.1 MGP_129S1SvImJ_G0026120.1 mouse_genomes_project 2 91239763 91240865 + MGP_129S1SvImJ_P0055945 Olfr1265 protein_coding protein_coding MGP_129S1SvImJ_T0054202.1 MGP_129S1SvImJ_G0025620.1 mouse_genomes_project 2 31223577 31225842 - 6330409D20Rik protein_coding processed_transcript MGP_129S1SvImJ_T0054203.1 MGP_129S1SvImJ_G0025620.1 mouse_genomes_project 2 31223577 31231735 - MGP_129S1SvImJ_P0054203 6330409D20Rik protein_coding protein_coding MGP_129S1SvImJ_T0055790.1 MGP_129S1SvImJ_G0025996.1 mouse_genomes_project 2 88083524 88084463 - MGP_129S1SvImJ_P0055790 Olfr1109 protein_coding protein_coding MGP_129S1SvImJ_T0059620.1 MGP_129S1SvImJ_G0026968.1 mouse_genomes_project 2 180808376 180818129 + MGP_129S1SvImJ_P0059620 Tubb1 protein_coding protein_coding MGP_129S1SvImJ_T0013757.1 MGP_129S1SvImJ_G0011846.1 mouse_genomes_project 2 124664038 124664717 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059699.1 MGP_129S1SvImJ_G0026989.1 mouse_genomes_project 2 186682742 186686013 - Lama5 protein_coding processed_transcript MGP_129S1SvImJ_T0059700.1 MGP_129S1SvImJ_G0026989.1 mouse_genomes_project 2 186682742 186732479 - MGP_129S1SvImJ_P0059700 Lama5 protein_coding protein_coding MGP_129S1SvImJ_T0059701.1 MGP_129S1SvImJ_G0026989.1 mouse_genomes_project 2 186682823 186683957 - Lama5 protein_coding processed_transcript MGP_129S1SvImJ_T0059702.1 MGP_129S1SvImJ_G0026989.1 mouse_genomes_project 2 186683537 186684773 - Lama5 protein_coding processed_transcript MGP_129S1SvImJ_T0059727.1 MGP_129S1SvImJ_G0026997.1 mouse_genomes_project 2 187119618 187126184 + MGP_129S1SvImJ_P0059727 Ogfr protein_coding protein_coding MGP_129S1SvImJ_T0059728.1 MGP_129S1SvImJ_G0026997.1 mouse_genomes_project 2 187119835 187124223 + Ogfr protein_coding retained_intron MGP_129S1SvImJ_T0058285.1 MGP_129S1SvImJ_G0026654.1 mouse_genomes_project 2 156820537 156842153 + MGP_129S1SvImJ_P0058285 Tbc1d20 protein_coding protein_coding MGP_129S1SvImJ_T0058286.1 MGP_129S1SvImJ_G0026654.1 mouse_genomes_project 2 156820560 156836256 + MGP_129S1SvImJ_P0058286 Tbc1d20 protein_coding protein_coding MGP_129S1SvImJ_T0058287.1 MGP_129S1SvImJ_G0026654.1 mouse_genomes_project 2 156820581 156842153 + Tbc1d20 protein_coding retained_intron MGP_129S1SvImJ_T0058288.1 MGP_129S1SvImJ_G0026654.1 mouse_genomes_project 2 156820889 156836602 + MGP_129S1SvImJ_P0058288 Tbc1d20 protein_coding protein_coding MGP_129S1SvImJ_T0058289.1 MGP_129S1SvImJ_G0026654.1 mouse_genomes_project 2 156836372 156838977 + Tbc1d20 protein_coding retained_intron MGP_129S1SvImJ_T0013474.1 MGP_129S1SvImJ_G0011563.1 mouse_genomes_project 2 21959862 21961316 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056382.1 MGP_129S1SvImJ_G0026197.1 mouse_genomes_project 2 104479600 104568120 + MGP_129S1SvImJ_P0056382 Pamr1 protein_coding protein_coding MGP_129S1SvImJ_T0056383.1 MGP_129S1SvImJ_G0026197.1 mouse_genomes_project 2 104479658 104487607 + Pamr1 protein_coding processed_transcript MGP_129S1SvImJ_T0056384.1 MGP_129S1SvImJ_G0026197.1 mouse_genomes_project 2 104479737 104560770 + Pamr1 protein_coding retained_intron MGP_129S1SvImJ_T0056385.1 MGP_129S1SvImJ_G0026197.1 mouse_genomes_project 2 104561147 104565859 + Pamr1 protein_coding retained_intron MGP_129S1SvImJ_T0010419.1 MGP_129S1SvImJ_G0008535.1 mouse_genomes_project 2 31167902 31168039 - Mir8093 miRNA miRNA MGP_129S1SvImJ_T0058223.1 MGP_129S1SvImJ_G0026639.1 mouse_genomes_project 2 155969366 155994605 + MGP_129S1SvImJ_P0058223 Nsfl1c protein_coding protein_coding MGP_129S1SvImJ_T0058224.1 MGP_129S1SvImJ_G0026639.1 mouse_genomes_project 2 155969373 155988132 + Nsfl1c protein_coding retained_intron MGP_129S1SvImJ_T0058225.1 MGP_129S1SvImJ_G0026639.1 mouse_genomes_project 2 155969474 155982264 + Nsfl1c protein_coding retained_intron MGP_129S1SvImJ_T0058226.1 MGP_129S1SvImJ_G0026639.1 mouse_genomes_project 2 155969477 155994600 + MGP_129S1SvImJ_P0058226 Nsfl1c protein_coding protein_coding MGP_129S1SvImJ_T0058227.1 MGP_129S1SvImJ_G0026639.1 mouse_genomes_project 2 155969488 155994709 + MGP_129S1SvImJ_P0058227 Nsfl1c protein_coding protein_coding MGP_129S1SvImJ_T0058228.1 MGP_129S1SvImJ_G0026639.1 mouse_genomes_project 2 155969495 155984450 + Nsfl1c protein_coding retained_intron MGP_129S1SvImJ_T0058229.1 MGP_129S1SvImJ_G0026639.1 mouse_genomes_project 2 155983353 155991973 + Nsfl1c protein_coding processed_transcript MGP_129S1SvImJ_T0058230.1 MGP_129S1SvImJ_G0026639.1 mouse_genomes_project 2 155984006 155994273 + Nsfl1c protein_coding retained_intron MGP_129S1SvImJ_T0058231.1 MGP_129S1SvImJ_G0026639.1 mouse_genomes_project 2 155984763 155992003 + Nsfl1c protein_coding retained_intron MGP_129S1SvImJ_T0058232.1 MGP_129S1SvImJ_G0026639.1 mouse_genomes_project 2 155991410 155994546 + Nsfl1c protein_coding retained_intron MGP_129S1SvImJ_T0055750.1 MGP_129S1SvImJ_G0025958.1 mouse_genomes_project 2 87000640 87001585 - MGP_129S1SvImJ_P0055750 Olfr1044 protein_coding protein_coding MGP_129S1SvImJ_T0056608.1 MGP_129S1SvImJ_G0026241.1 mouse_genomes_project 2 112245483 112255632 + MGP_129S1SvImJ_P0056608 Lin7c protein_coding protein_coding MGP_129S1SvImJ_T0056609.1 MGP_129S1SvImJ_G0026241.1 mouse_genomes_project 2 112245500 112251365 + Lin7c protein_coding retained_intron MGP_129S1SvImJ_T0013533.1 MGP_129S1SvImJ_G0011622.1 mouse_genomes_project 2 47542721 47543035 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0052670.1 MGP_129S1SvImJ_G0025362.1 mouse_genomes_project 2 11738658 11848506 + MGP_129S1SvImJ_P0052670 Mrc1 protein_coding protein_coding MGP_129S1SvImJ_T0052671.1 MGP_129S1SvImJ_G0025362.1 mouse_genomes_project 2 11845009 11848376 + Mrc1 protein_coding retained_intron MGP_129S1SvImJ_T0102409.1 MGP_129S1SvImJ_G0040243.1 mouse_genomes_project 2 87383556 87384835 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0010377.1 MGP_129S1SvImJ_G0008493.1 mouse_genomes_project 2 7873843 7873941 + Mir669m-1 miRNA miRNA MGP_129S1SvImJ_T0058186.1 MGP_129S1SvImJ_G0026629.1 mouse_genomes_project 2 155132961 155141620 - MGP_129S1SvImJ_P0058186 Vsx1 protein_coding protein_coding MGP_129S1SvImJ_T0055858.1 MGP_129S1SvImJ_G0026053.1 mouse_genomes_project 2 89552187 89553233 - MGP_129S1SvImJ_P0055858 protein_coding protein_coding MGP_129S1SvImJ_T0007434.1 MGP_129S1SvImJ_G0006100.1 mouse_genomes_project 2 178138345 178149781 - lincRNA lincRNA MGP_129S1SvImJ_T0055382.1 MGP_129S1SvImJ_G0025845.1 mouse_genomes_project 2 74982503 74985791 + MGP_129S1SvImJ_P0055382 Hoxd13 protein_coding protein_coding MGP_129S1SvImJ_T0099708.1 MGP_129S1SvImJ_G0037775.1 mouse_genomes_project 2 157767396 157767499 + Gm25643 snRNA snRNA MGP_129S1SvImJ_T0013416.1 MGP_129S1SvImJ_G0011505.1 mouse_genomes_project 2 693418 694207 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098850.1 MGP_129S1SvImJ_G0036929.1 mouse_genomes_project 2 1112885 1116235 + Gm10862 sense_intronic sense_intronic MGP_129S1SvImJ_T0055860.1 MGP_129S1SvImJ_G0026055.1 mouse_genomes_project 2 89578619 89579531 + MGP_129S1SvImJ_P0055860 Olfr1183 protein_coding protein_coding MGP_129S1SvImJ_T0013656.1 MGP_129S1SvImJ_G0011745.1 mouse_genomes_project 2 88294388 88294788 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058305.1 MGP_129S1SvImJ_G0026660.1 mouse_genomes_project 2 156955904 157002010 + MGP_129S1SvImJ_P0058305 6820408C15Rik protein_coding protein_coding MGP_129S1SvImJ_T0058306.1 MGP_129S1SvImJ_G0026660.1 mouse_genomes_project 2 156979931 157002009 + MGP_129S1SvImJ_P0058306 6820408C15Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058307.1 MGP_129S1SvImJ_G0026660.1 mouse_genomes_project 2 156979958 156997320 + MGP_129S1SvImJ_P0058307 6820408C15Rik protein_coding protein_coding MGP_129S1SvImJ_T0059833.1 MGP_129S1SvImJ_G0027018.1 mouse_genomes_project 2 187888651 187896877 - MGP_129S1SvImJ_P0059833 Stmn3 protein_coding protein_coding MGP_129S1SvImJ_T0058990.1 MGP_129S1SvImJ_G0026808.1 mouse_genomes_project 2 166081380 166107723 + MGP_129S1SvImJ_P0058990 Lpin3 protein_coding protein_coding MGP_129S1SvImJ_T0058991.1 MGP_129S1SvImJ_G0026808.1 mouse_genomes_project 2 166088833 166107728 + MGP_129S1SvImJ_P0058991 Lpin3 protein_coding protein_coding MGP_129S1SvImJ_T0058992.1 MGP_129S1SvImJ_G0026808.1 mouse_genomes_project 2 166088833 166107728 + MGP_129S1SvImJ_P0058992 Lpin3 protein_coding protein_coding MGP_129S1SvImJ_T0058993.1 MGP_129S1SvImJ_G0026808.1 mouse_genomes_project 2 166088896 166107518 + MGP_129S1SvImJ_P0058993 Lpin3 protein_coding protein_coding MGP_129S1SvImJ_T0058994.1 MGP_129S1SvImJ_G0026808.1 mouse_genomes_project 2 166103274 166105463 + Lpin3 protein_coding processed_transcript MGP_129S1SvImJ_T0003971.1 MGP_129S1SvImJ_G0003546.1 mouse_genomes_project 2 31375109 31377356 - Gm13523 antisense antisense MGP_129S1SvImJ_T0007413.1 MGP_129S1SvImJ_G0006082.1 mouse_genomes_project 2 173978701 173980612 - E130018N17Rik lincRNA lincRNA MGP_129S1SvImJ_T0059026.1 MGP_129S1SvImJ_G0026815.1 mouse_genomes_project 2 168274449 168301114 + MGP_129S1SvImJ_P0059026 Sgk2 protein_coding protein_coding MGP_129S1SvImJ_T0059027.1 MGP_129S1SvImJ_G0026815.1 mouse_genomes_project 2 168274621 168301113 + MGP_129S1SvImJ_P0059027 Sgk2 protein_coding protein_coding MGP_129S1SvImJ_T0059028.1 MGP_129S1SvImJ_G0026815.1 mouse_genomes_project 2 168287144 168295901 + Sgk2 protein_coding retained_intron MGP_129S1SvImJ_T0058757.1 MGP_129S1SvImJ_G0026762.1 mouse_genomes_project 2 161190334 161191192 - MGP_129S1SvImJ_P0058757 Scand1 protein_coding protein_coding MGP_129S1SvImJ_T0099711.1 MGP_129S1SvImJ_G0037778.1 mouse_genomes_project 2 168865819 168865922 + Gm25881 snRNA snRNA MGP_129S1SvImJ_T0003986.1 MGP_129S1SvImJ_G0003558.1 mouse_genomes_project 2 37598954 37615746 + Nr6a1os antisense antisense MGP_129S1SvImJ_T0003987.1 MGP_129S1SvImJ_G0003558.1 mouse_genomes_project 2 37599038 37629512 + Nr6a1os antisense antisense MGP_129S1SvImJ_T0007364.1 MGP_129S1SvImJ_G0006040.1 mouse_genomes_project 2 155191420 155193902 - Gm26681 lincRNA lincRNA MGP_129S1SvImJ_T0013561.1 MGP_129S1SvImJ_G0011650.1 mouse_genomes_project 2 56767775 56770898 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054610.1 MGP_129S1SvImJ_G0025711.1 mouse_genomes_project 2 37865297 38005456 - MGP_129S1SvImJ_P0054610 Scai protein_coding protein_coding MGP_129S1SvImJ_T0054611.1 MGP_129S1SvImJ_G0025711.1 mouse_genomes_project 2 37873848 38005427 - MGP_129S1SvImJ_P0054611 Scai protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054612.1 MGP_129S1SvImJ_G0025711.1 mouse_genomes_project 2 37874090 38005414 - MGP_129S1SvImJ_P0054612 Scai protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054613.1 MGP_129S1SvImJ_G0025711.1 mouse_genomes_project 2 37874155 37901432 - MGP_129S1SvImJ_P0054613 Scai protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054614.1 MGP_129S1SvImJ_G0025711.1 mouse_genomes_project 2 37882059 38005452 - MGP_129S1SvImJ_P0054614 Scai protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054615.1 MGP_129S1SvImJ_G0025711.1 mouse_genomes_project 2 37903448 38005456 - Scai protein_coding retained_intron MGP_129S1SvImJ_T0054616.1 MGP_129S1SvImJ_G0025711.1 mouse_genomes_project 2 37905512 38005452 - Scai protein_coding retained_intron MGP_129S1SvImJ_T0054617.1 MGP_129S1SvImJ_G0025711.1 mouse_genomes_project 2 37908739 37910794 - Scai protein_coding retained_intron MGP_129S1SvImJ_T0054618.1 MGP_129S1SvImJ_G0025711.1 mouse_genomes_project 2 37908888 37928062 - Scai protein_coding retained_intron MGP_129S1SvImJ_T0102441.1 MGP_129S1SvImJ_G0040275.1 mouse_genomes_project 2 125509483 125509759 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0004042.1 MGP_129S1SvImJ_G0003595.1 mouse_genomes_project 2 75485232 75673622 + 2600014E21Rik antisense antisense MGP_129S1SvImJ_T0007130.1 MGP_129S1SvImJ_G0005853.1 mouse_genomes_project 2 949234 952526 - Gm13191 lincRNA lincRNA MGP_129S1SvImJ_T0013624.1 MGP_129S1SvImJ_G0011713.1 mouse_genomes_project 2 79140677 79141175 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058004.1 MGP_129S1SvImJ_G0026579.1 mouse_genomes_project 2 147998330 148005501 - Rrbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0058005.1 MGP_129S1SvImJ_G0026579.1 mouse_genomes_project 2 147998330 148065046 - MGP_129S1SvImJ_P0058005 Rrbp1 protein_coding protein_coding MGP_129S1SvImJ_T0058006.1 MGP_129S1SvImJ_G0026579.1 mouse_genomes_project 2 147999062 148000668 - Rrbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0058007.1 MGP_129S1SvImJ_G0026579.1 mouse_genomes_project 2 148001423 148008400 - Rrbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0058008.1 MGP_129S1SvImJ_G0026579.1 mouse_genomes_project 2 148009594 148010844 - Rrbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0058009.1 MGP_129S1SvImJ_G0026579.1 mouse_genomes_project 2 148015462 148022370 - Rrbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0058010.1 MGP_129S1SvImJ_G0026579.1 mouse_genomes_project 2 148019629 148037825 - Rrbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0058011.1 MGP_129S1SvImJ_G0026579.1 mouse_genomes_project 2 148040516 148065046 - MGP_129S1SvImJ_P0058011 Rrbp1 protein_coding protein_coding MGP_129S1SvImJ_T0003944.1 MGP_129S1SvImJ_G0003524.1 mouse_genomes_project 2 24000791 24002057 + Gm13554 antisense antisense MGP_129S1SvImJ_T0055896.1 MGP_129S1SvImJ_G0026087.1 mouse_genomes_project 2 90391943 90392876 - MGP_129S1SvImJ_P0055896 Olfr1226 protein_coding protein_coding MGP_129S1SvImJ_T0013674.1 MGP_129S1SvImJ_G0011763.1 mouse_genomes_project 2 92869100 92869405 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059356.1 MGP_129S1SvImJ_G0026904.1 mouse_genomes_project 2 172589644 172630945 + Cse1l protein_coding processed_transcript MGP_129S1SvImJ_T0059357.1 MGP_129S1SvImJ_G0026904.1 mouse_genomes_project 2 172589663 172632789 + MGP_129S1SvImJ_P0059357 Cse1l protein_coding protein_coding MGP_129S1SvImJ_T0059358.1 MGP_129S1SvImJ_G0026904.1 mouse_genomes_project 2 172589715 172632501 + MGP_129S1SvImJ_P0059358 Cse1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059359.1 MGP_129S1SvImJ_G0026904.1 mouse_genomes_project 2 172599661 172632193 + MGP_129S1SvImJ_P0059359 Cse1l protein_coding protein_coding MGP_129S1SvImJ_T0059360.1 MGP_129S1SvImJ_G0026904.1 mouse_genomes_project 2 172613455 172632208 + MGP_129S1SvImJ_P0059360 Cse1l protein_coding protein_coding MGP_129S1SvImJ_T0059361.1 MGP_129S1SvImJ_G0026904.1 mouse_genomes_project 2 172613490 172618719 + Cse1l protein_coding retained_intron MGP_129S1SvImJ_T0059362.1 MGP_129S1SvImJ_G0026904.1 mouse_genomes_project 2 172613649 172621402 + Cse1l protein_coding retained_intron MGP_129S1SvImJ_T0059363.1 MGP_129S1SvImJ_G0026904.1 mouse_genomes_project 2 172613693 172623741 + Cse1l protein_coding processed_transcript MGP_129S1SvImJ_T0059364.1 MGP_129S1SvImJ_G0026904.1 mouse_genomes_project 2 172621069 172631248 + Cse1l protein_coding retained_intron MGP_129S1SvImJ_T0059365.1 MGP_129S1SvImJ_G0026904.1 mouse_genomes_project 2 172621096 172627770 + MGP_129S1SvImJ_P0059365 Cse1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059366.1 MGP_129S1SvImJ_G0026904.1 mouse_genomes_project 2 172623412 172627566 + Cse1l protein_coding retained_intron MGP_129S1SvImJ_T0059367.1 MGP_129S1SvImJ_G0026904.1 mouse_genomes_project 2 172627148 172628134 + Cse1l protein_coding retained_intron MGP_129S1SvImJ_T0056428.1 MGP_129S1SvImJ_G0026204.1 mouse_genomes_project 2 105436736 105467757 - MGP_129S1SvImJ_P0056428 Cat protein_coding protein_coding MGP_129S1SvImJ_T0056429.1 MGP_129S1SvImJ_G0026204.1 mouse_genomes_project 2 105437481 105467722 - MGP_129S1SvImJ_P0056429 Cat protein_coding protein_coding MGP_129S1SvImJ_T0059651.1 MGP_129S1SvImJ_G0026980.1 mouse_genomes_project 2 185904090 186378593 + MGP_129S1SvImJ_P0059651 Cdh4 protein_coding protein_coding MGP_129S1SvImJ_T0059652.1 MGP_129S1SvImJ_G0026980.1 mouse_genomes_project 2 185904281 186326977 + MGP_129S1SvImJ_P0059652 Cdh4 protein_coding protein_coding MGP_129S1SvImJ_T0059653.1 MGP_129S1SvImJ_G0026980.1 mouse_genomes_project 2 185905828 186257045 + Cdh4 protein_coding processed_transcript MGP_129S1SvImJ_T0059654.1 MGP_129S1SvImJ_G0026980.1 mouse_genomes_project 2 186254141 186276851 + Cdh4 protein_coding processed_transcript MGP_129S1SvImJ_T0059655.1 MGP_129S1SvImJ_G0026980.1 mouse_genomes_project 2 186373095 186375361 + Cdh4 protein_coding retained_intron MGP_129S1SvImJ_T0059656.1 MGP_129S1SvImJ_G0026980.1 mouse_genomes_project 2 186373120 186373905 + MGP_129S1SvImJ_P0059656 Cdh4 protein_coding protein_coding MGP_129S1SvImJ_T0003998.1 MGP_129S1SvImJ_G0003566.1 mouse_genomes_project 2 60007045 60008100 + Gm13580 antisense antisense MGP_129S1SvImJ_T0013599.1 MGP_129S1SvImJ_G0011688.1 mouse_genomes_project 2 70672584 70672833 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055857.1 MGP_129S1SvImJ_G0026052.1 mouse_genomes_project 2 89522750 89530264 - MGP_129S1SvImJ_P0055857 protein_coding protein_coding MGP_129S1SvImJ_T0013791.1 MGP_129S1SvImJ_G0011880.1 mouse_genomes_project 2 140537292 140537762 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058939.1 MGP_129S1SvImJ_G0026797.1 mouse_genomes_project 2 163694743 163699725 + MGP_129S1SvImJ_P0058939 Slc32a1 protein_coding protein_coding MGP_129S1SvImJ_T0054423.1 MGP_129S1SvImJ_G0025653.1 mouse_genomes_project 2 33988955 34002659 - MGP_129S1SvImJ_P0054423 4930568D16Rik protein_coding protein_coding MGP_129S1SvImJ_T0102380.1 MGP_129S1SvImJ_G0040214.1 mouse_genomes_project 2 20296359 20296850 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0055893.1 MGP_129S1SvImJ_G0026084.1 mouse_genomes_project 2 90329549 90330485 - MGP_129S1SvImJ_P0055893 Olfr1223 protein_coding protein_coding MGP_129S1SvImJ_T0007376.1 MGP_129S1SvImJ_G0006051.1 mouse_genomes_project 2 161523089 161524091 - Gm14174 lincRNA lincRNA MGP_129S1SvImJ_T0053884.1 MGP_129S1SvImJ_G0025573.1 mouse_genomes_project 2 29085492 29101398 + MGP_129S1SvImJ_P0053884 Ntmt1 protein_coding protein_coding MGP_129S1SvImJ_T0053885.1 MGP_129S1SvImJ_G0025573.1 mouse_genomes_project 2 29085607 29101382 + MGP_129S1SvImJ_P0053885 Ntmt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053886.1 MGP_129S1SvImJ_G0025573.1 mouse_genomes_project 2 29085608 29100750 + MGP_129S1SvImJ_P0053886 Ntmt1 protein_coding protein_coding MGP_129S1SvImJ_T0053887.1 MGP_129S1SvImJ_G0025573.1 mouse_genomes_project 2 29085623 29093789 + Ntmt1 protein_coding processed_transcript MGP_129S1SvImJ_T0053888.1 MGP_129S1SvImJ_G0025573.1 mouse_genomes_project 2 29085660 29094253 + Ntmt1 protein_coding processed_transcript MGP_129S1SvImJ_T0053889.1 MGP_129S1SvImJ_G0025573.1 mouse_genomes_project 2 29085779 29100917 + MGP_129S1SvImJ_P0053889 Ntmt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053890.1 MGP_129S1SvImJ_G0025573.1 mouse_genomes_project 2 29085856 29098983 + MGP_129S1SvImJ_P0053890 Ntmt1 protein_coding protein_coding MGP_129S1SvImJ_T0053891.1 MGP_129S1SvImJ_G0025573.1 mouse_genomes_project 2 29096430 29099103 + MGP_129S1SvImJ_P0053891 Ntmt1 protein_coding protein_coding MGP_129S1SvImJ_T0053892.1 MGP_129S1SvImJ_G0025573.1 mouse_genomes_project 2 29098136 29100924 + MGP_129S1SvImJ_P0053892 Ntmt1 protein_coding protein_coding MGP_129S1SvImJ_T0057757.1 MGP_129S1SvImJ_G0026521.1 mouse_genomes_project 2 134638875 134657449 + MGP_129S1SvImJ_P0057757 Hspa12b protein_coding protein_coding MGP_129S1SvImJ_T0057758.1 MGP_129S1SvImJ_G0026521.1 mouse_genomes_project 2 134639037 134648713 + MGP_129S1SvImJ_P0057758 Hspa12b protein_coding protein_coding MGP_129S1SvImJ_T0057759.1 MGP_129S1SvImJ_G0026521.1 mouse_genomes_project 2 134639089 134656355 + MGP_129S1SvImJ_P0057759 Hspa12b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0010388.1 MGP_129S1SvImJ_G0008504.1 mouse_genomes_project 2 7879160 7879285 + Mir669h miRNA miRNA MGP_129S1SvImJ_T0013699.1 MGP_129S1SvImJ_G0011788.1 mouse_genomes_project 2 104067682 104070726 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057364.1 MGP_129S1SvImJ_G0026428.1 mouse_genomes_project 2 128474495 128689315 - MGP_129S1SvImJ_P0057364 Fbn1 protein_coding protein_coding MGP_129S1SvImJ_T0057365.1 MGP_129S1SvImJ_G0026428.1 mouse_genomes_project 2 128474528 128690923 - MGP_129S1SvImJ_P0057365 Fbn1 protein_coding protein_coding MGP_129S1SvImJ_T0057366.1 MGP_129S1SvImJ_G0026428.1 mouse_genomes_project 2 128565575 128689002 - Fbn1 protein_coding retained_intron MGP_129S1SvImJ_T0055954.1 MGP_129S1SvImJ_G0026128.1 mouse_genomes_project 2 91624335 91627460 + MGP_129S1SvImJ_P0055954 protein_coding protein_coding MGP_129S1SvImJ_T0057522.1 MGP_129S1SvImJ_G0026465.1 mouse_genomes_project 2 130925827 130949221 - MGP_129S1SvImJ_P0057522 Mal protein_coding protein_coding MGP_129S1SvImJ_T0057523.1 MGP_129S1SvImJ_G0026465.1 mouse_genomes_project 2 130927475 130948745 - MGP_129S1SvImJ_P0057523 Mal protein_coding protein_coding MGP_129S1SvImJ_T0001102.1 MGP_129S1SvImJ_G0001031.1 mouse_genomes_project 2 67793810 67798696 + TEC TEC MGP_129S1SvImJ_T0053587.1 MGP_129S1SvImJ_G0025531.1 mouse_genomes_project 2 26777371 26899110 + MGP_129S1SvImJ_P0053587 Ak8 protein_coding protein_coding MGP_129S1SvImJ_T0053588.1 MGP_129S1SvImJ_G0025531.1 mouse_genomes_project 2 26777414 26814282 + Ak8 protein_coding processed_transcript MGP_129S1SvImJ_T0053589.1 MGP_129S1SvImJ_G0025531.1 mouse_genomes_project 2 26822087 26841807 + Ak8 protein_coding processed_transcript MGP_129S1SvImJ_T0102446.1 MGP_129S1SvImJ_G0040280.1 mouse_genomes_project 2 158372770 158417887 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0056797.1 MGP_129S1SvImJ_G0026317.1 mouse_genomes_project 2 121285432 121332544 + MGP_129S1SvImJ_P0056797 Bub1b protein_coding protein_coding MGP_129S1SvImJ_T0056798.1 MGP_129S1SvImJ_G0026317.1 mouse_genomes_project 2 121287218 121296872 + Bub1b protein_coding retained_intron MGP_129S1SvImJ_T0056799.1 MGP_129S1SvImJ_G0026317.1 mouse_genomes_project 2 121318186 121319416 + Bub1b protein_coding retained_intron MGP_129S1SvImJ_T0056800.1 MGP_129S1SvImJ_G0026317.1 mouse_genomes_project 2 121319121 121327703 + Bub1b protein_coding retained_intron MGP_129S1SvImJ_T0013687.1 MGP_129S1SvImJ_G0011776.1 mouse_genomes_project 2 97279498 97279616 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099709.1 MGP_129S1SvImJ_G0037776.1 mouse_genomes_project 2 162747202 162747301 + Gm23463 snRNA snRNA MGP_129S1SvImJ_T0056968.1 MGP_129S1SvImJ_G0026357.1 mouse_genomes_project 2 122882455 122898080 + MGP_129S1SvImJ_P0056968 Gm28042 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056970.1 MGP_129S1SvImJ_G0026357.1 mouse_genomes_project 2 122882466 122898080 + MGP_129S1SvImJ_P0056970 Gm28042 protein_coding protein_coding MGP_129S1SvImJ_T0056971.1 MGP_129S1SvImJ_G0026357.1 mouse_genomes_project 2 122882469 122896646 + MGP_129S1SvImJ_P0056971 Gm28042 protein_coding protein_coding MGP_129S1SvImJ_T0056975.1 MGP_129S1SvImJ_G0026357.1 mouse_genomes_project 2 122886920 122890058 + MGP_129S1SvImJ_P0056975 Gm28042 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0004012.1 MGP_129S1SvImJ_G0003577.1 mouse_genomes_project 2 67362858 67388369 - Gm13601 antisense antisense MGP_129S1SvImJ_T0059163.1 MGP_129S1SvImJ_G0026862.1 mouse_genomes_project 2 170116076 170120167 - MGP_129S1SvImJ_P0059163 Wfdc16 protein_coding protein_coding MGP_129S1SvImJ_T0054455.1 MGP_129S1SvImJ_G0025658.1 mouse_genomes_project 2 34712849 34725930 - MGP_129S1SvImJ_P0054455 Ndufa8 protein_coding protein_coding MGP_129S1SvImJ_T0056757.1 MGP_129S1SvImJ_G0026307.1 mouse_genomes_project 2 119480303 119493732 + MGP_129S1SvImJ_P0056757 Tmco5 protein_coding protein_coding MGP_129S1SvImJ_T0056758.1 MGP_129S1SvImJ_G0026307.1 mouse_genomes_project 2 119480306 119493688 + MGP_129S1SvImJ_P0056758 Tmco5 protein_coding protein_coding MGP_129S1SvImJ_T0056759.1 MGP_129S1SvImJ_G0026307.1 mouse_genomes_project 2 119480320 119494045 + MGP_129S1SvImJ_P0056759 Tmco5 protein_coding protein_coding MGP_129S1SvImJ_T0056760.1 MGP_129S1SvImJ_G0026307.1 mouse_genomes_project 2 119489745 119494045 + Tmco5 protein_coding processed_transcript MGP_129S1SvImJ_T0055721.1 MGP_129S1SvImJ_G0025931.1 mouse_genomes_project 2 86436711 86437888 - MGP_129S1SvImJ_P0055721 protein_coding protein_coding MGP_129S1SvImJ_T0007183.1 MGP_129S1SvImJ_G0005893.1 mouse_genomes_project 2 32486191 32492517 - Gm13403 lincRNA lincRNA MGP_129S1SvImJ_T0007184.1 MGP_129S1SvImJ_G0005893.1 mouse_genomes_project 2 32488298 32492549 - Gm13403 lincRNA lincRNA MGP_129S1SvImJ_T0058086.1 MGP_129S1SvImJ_G0026596.1 mouse_genomes_project 2 150085658 150103092 - MGP_129S1SvImJ_P0058086 Crnkl1 protein_coding protein_coding MGP_129S1SvImJ_T0058087.1 MGP_129S1SvImJ_G0026596.1 mouse_genomes_project 2 150098473 150099473 - Crnkl1 protein_coding retained_intron MGP_129S1SvImJ_T0058088.1 MGP_129S1SvImJ_G0026596.1 mouse_genomes_project 2 150100053 150102792 - Crnkl1 protein_coding retained_intron MGP_129S1SvImJ_T0013834.1 MGP_129S1SvImJ_G0011923.1 mouse_genomes_project 2 156192645 156193097 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058865.1 MGP_129S1SvImJ_G0026782.1 mouse_genomes_project 2 162422371 162484865 + MGP_129S1SvImJ_P0058865 Src protein_coding protein_coding MGP_129S1SvImJ_T0058866.1 MGP_129S1SvImJ_G0026782.1 mouse_genomes_project 2 162428042 162466730 + Src protein_coding processed_transcript MGP_129S1SvImJ_T0058867.1 MGP_129S1SvImJ_G0026782.1 mouse_genomes_project 2 162428206 162484892 + MGP_129S1SvImJ_P0058867 Src protein_coding protein_coding MGP_129S1SvImJ_T0058868.1 MGP_129S1SvImJ_G0026782.1 mouse_genomes_project 2 162428318 162471635 + Src protein_coding processed_transcript MGP_129S1SvImJ_T0058869.1 MGP_129S1SvImJ_G0026782.1 mouse_genomes_project 2 162428318 162466629 + Src protein_coding processed_transcript MGP_129S1SvImJ_T0058870.1 MGP_129S1SvImJ_G0026782.1 mouse_genomes_project 2 162428797 162484875 + MGP_129S1SvImJ_P0058870 Src protein_coding unknown_likely_coding MGP_129S1SvImJ_T0058871.1 MGP_129S1SvImJ_G0026782.1 mouse_genomes_project 2 162466693 162484868 + MGP_129S1SvImJ_P0058871 Src protein_coding protein_coding MGP_129S1SvImJ_T0052554.1 MGP_129S1SvImJ_G0025345.1 mouse_genomes_project 2 9044806 9045465 - MGP_129S1SvImJ_P0052554 Gm17490 protein_coding protein_coding MGP_129S1SvImJ_T0101884.1 MGP_129S1SvImJ_G0039810.1 mouse_genomes_project 2 35940465 35944356 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101885.1 MGP_129S1SvImJ_G0039810.1 mouse_genomes_project 2 35943924 35944869 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0004149.1 MGP_129S1SvImJ_G0003670.1 mouse_genomes_project 2 158319295 158320892 - Dnmt3bos antisense antisense MGP_129S1SvImJ_T0052729.1 MGP_129S1SvImJ_G0025373.1 mouse_genomes_project 2 15724225 15900317 + MGP_129S1SvImJ_P0052729 Mllt10 protein_coding protein_coding MGP_129S1SvImJ_T0052730.1 MGP_129S1SvImJ_G0025373.1 mouse_genomes_project 2 15735027 15802817 + Mllt10 protein_coding processed_transcript MGP_129S1SvImJ_T0052731.1 MGP_129S1SvImJ_G0025373.1 mouse_genomes_project 2 15735317 15807254 + Mllt10 protein_coding processed_transcript MGP_129S1SvImJ_T0052732.1 MGP_129S1SvImJ_G0025373.1 mouse_genomes_project 2 15735320 15896868 + MGP_129S1SvImJ_P0052732 Mllt10 protein_coding protein_coding MGP_129S1SvImJ_T0052733.1 MGP_129S1SvImJ_G0025373.1 mouse_genomes_project 2 15735438 15804281 + Mllt10 protein_coding processed_transcript MGP_129S1SvImJ_T0052734.1 MGP_129S1SvImJ_G0025373.1 mouse_genomes_project 2 15735467 15789151 + Mllt10 protein_coding processed_transcript MGP_129S1SvImJ_T0052735.1 MGP_129S1SvImJ_G0025373.1 mouse_genomes_project 2 15735474 15735889 + Mllt10 protein_coding processed_transcript MGP_129S1SvImJ_T0052736.1 MGP_129S1SvImJ_G0025373.1 mouse_genomes_project 2 15755522 15896710 + MGP_129S1SvImJ_P0052736 Mllt10 protein_coding protein_coding MGP_129S1SvImJ_T0052737.1 MGP_129S1SvImJ_G0025373.1 mouse_genomes_project 2 15804177 15843795 + Mllt10 protein_coding processed_transcript MGP_129S1SvImJ_T0052738.1 MGP_129S1SvImJ_G0025373.1 mouse_genomes_project 2 15854431 15872129 + Mllt10 protein_coding processed_transcript MGP_129S1SvImJ_T0010391.1 MGP_129S1SvImJ_G0008507.1 mouse_genomes_project 2 15201186 15201299 + Mir6419 miRNA miRNA MGP_129S1SvImJ_T0001104.1 MGP_129S1SvImJ_G0001033.1 mouse_genomes_project 2 68827687 68830924 + TEC TEC MGP_129S1SvImJ_T0013631.1 MGP_129S1SvImJ_G0011720.1 mouse_genomes_project 2 81082634 81082916 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055680.1 MGP_129S1SvImJ_G0025916.1 mouse_genomes_project 2 85634788 85638658 + MGP_129S1SvImJ_P0055680 Slc43a3 protein_coding protein_coding MGP_129S1SvImJ_T0055681.1 MGP_129S1SvImJ_G0025916.1 mouse_genomes_project 2 85634826 85639154 + MGP_129S1SvImJ_P0055681 Slc43a3 protein_coding protein_coding MGP_129S1SvImJ_T0055682.1 MGP_129S1SvImJ_G0025916.1 mouse_genomes_project 2 85634855 85647890 + MGP_129S1SvImJ_P0055682 Slc43a3 protein_coding protein_coding MGP_129S1SvImJ_T0055683.1 MGP_129S1SvImJ_G0025916.1 mouse_genomes_project 2 85634873 85661619 + MGP_129S1SvImJ_P0055683 Slc43a3 protein_coding protein_coding MGP_129S1SvImJ_T0055684.1 MGP_129S1SvImJ_G0025916.1 mouse_genomes_project 2 85634898 85638505 + Slc43a3 protein_coding processed_transcript MGP_129S1SvImJ_T0055685.1 MGP_129S1SvImJ_G0025916.1 mouse_genomes_project 2 85637713 85651437 + Slc43a3 protein_coding retained_intron MGP_129S1SvImJ_T0013489.1 MGP_129S1SvImJ_G0011578.1 mouse_genomes_project 2 30017632 30018590 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059628.1 MGP_129S1SvImJ_G0026971.1 mouse_genomes_project 2 181021850 181090209 + MGP_129S1SvImJ_P0059628 Zfp831 protein_coding protein_coding MGP_129S1SvImJ_T0057712.1 MGP_129S1SvImJ_G0026516.1 mouse_genomes_project 2 134187807 134330732 - MGP_129S1SvImJ_P0057712 4930402H24Rik protein_coding protein_coding MGP_129S1SvImJ_T0057713.1 MGP_129S1SvImJ_G0026516.1 mouse_genomes_project 2 134189441 134200582 - MGP_129S1SvImJ_P0057713 4930402H24Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057714.1 MGP_129S1SvImJ_G0026516.1 mouse_genomes_project 2 134190909 134211309 - MGP_129S1SvImJ_P0057714 4930402H24Rik protein_coding protein_coding MGP_129S1SvImJ_T0057715.1 MGP_129S1SvImJ_G0026516.1 mouse_genomes_project 2 134200491 134211576 - 4930402H24Rik protein_coding processed_transcript MGP_129S1SvImJ_T0057716.1 MGP_129S1SvImJ_G0026516.1 mouse_genomes_project 2 134219053 134222033 - 4930402H24Rik protein_coding retained_intron MGP_129S1SvImJ_T0057717.1 MGP_129S1SvImJ_G0026516.1 mouse_genomes_project 2 134221532 134240933 - 4930402H24Rik protein_coding processed_transcript MGP_129S1SvImJ_T0057718.1 MGP_129S1SvImJ_G0026516.1 mouse_genomes_project 2 134221543 134257410 - MGP_129S1SvImJ_P0057718 4930402H24Rik protein_coding protein_coding MGP_129S1SvImJ_T0057719.1 MGP_129S1SvImJ_G0026516.1 mouse_genomes_project 2 134230970 134330818 - 4930402H24Rik protein_coding retained_intron MGP_129S1SvImJ_T0057720.1 MGP_129S1SvImJ_G0026516.1 mouse_genomes_project 2 134263893 134264970 - 4930402H24Rik protein_coding processed_transcript MGP_129S1SvImJ_T0057721.1 MGP_129S1SvImJ_G0026516.1 mouse_genomes_project 2 134264090 134296850 - 4930402H24Rik protein_coding processed_transcript MGP_129S1SvImJ_T0057722.1 MGP_129S1SvImJ_G0026516.1 mouse_genomes_project 2 134270673 134330797 - 4930402H24Rik protein_coding retained_intron MGP_129S1SvImJ_T0057723.1 MGP_129S1SvImJ_G0026516.1 mouse_genomes_project 2 134289916 134301242 - 4930402H24Rik protein_coding processed_transcript MGP_129S1SvImJ_T0057724.1 MGP_129S1SvImJ_G0026516.1 mouse_genomes_project 2 134291846 134330831 - MGP_129S1SvImJ_P0057724 4930402H24Rik protein_coding protein_coding MGP_129S1SvImJ_T0057725.1 MGP_129S1SvImJ_G0026516.1 mouse_genomes_project 2 134296817 134330823 - MGP_129S1SvImJ_P0057725 4930402H24Rik protein_coding protein_coding MGP_129S1SvImJ_T0057726.1 MGP_129S1SvImJ_G0026516.1 mouse_genomes_project 2 134296852 134330820 - MGP_129S1SvImJ_P0057726 4930402H24Rik protein_coding protein_coding MGP_129S1SvImJ_T0057727.1 MGP_129S1SvImJ_G0026516.1 mouse_genomes_project 2 134299815 134398567 - MGP_129S1SvImJ_P0057727 4930402H24Rik protein_coding protein_coding MGP_129S1SvImJ_T0058244.1 MGP_129S1SvImJ_G0026642.1 mouse_genomes_project 2 156076111 156119282 - MGP_129S1SvImJ_P0058244 Snph protein_coding protein_coding MGP_129S1SvImJ_T0058245.1 MGP_129S1SvImJ_G0026642.1 mouse_genomes_project 2 156076111 156119306 - MGP_129S1SvImJ_P0058245 Snph protein_coding protein_coding MGP_129S1SvImJ_T0058246.1 MGP_129S1SvImJ_G0026642.1 mouse_genomes_project 2 156076126 156119300 - MGP_129S1SvImJ_P0058246 Snph protein_coding protein_coding MGP_129S1SvImJ_T0058247.1 MGP_129S1SvImJ_G0026642.1 mouse_genomes_project 2 156077293 156119326 - MGP_129S1SvImJ_P0058247 Snph protein_coding protein_coding MGP_129S1SvImJ_T0058248.1 MGP_129S1SvImJ_G0026642.1 mouse_genomes_project 2 156082723 156119204 - MGP_129S1SvImJ_P0058248 Snph protein_coding protein_coding MGP_129S1SvImJ_T0058249.1 MGP_129S1SvImJ_G0026642.1 mouse_genomes_project 2 156086384 156119259 - Snph protein_coding retained_intron MGP_129S1SvImJ_T0058250.1 MGP_129S1SvImJ_G0026642.1 mouse_genomes_project 2 156086547 156119273 - MGP_129S1SvImJ_P0058250 Snph protein_coding protein_coding MGP_129S1SvImJ_T0058251.1 MGP_129S1SvImJ_G0026642.1 mouse_genomes_project 2 156086564 156119294 - MGP_129S1SvImJ_P0058251 Snph protein_coding protein_coding MGP_129S1SvImJ_T0058252.1 MGP_129S1SvImJ_G0026642.1 mouse_genomes_project 2 156086772 156119306 - Snph protein_coding processed_transcript MGP_129S1SvImJ_T0058253.1 MGP_129S1SvImJ_G0026642.1 mouse_genomes_project 2 156107996 156119300 - Snph protein_coding processed_transcript MGP_129S1SvImJ_T0058254.1 MGP_129S1SvImJ_G0026642.1 mouse_genomes_project 2 156118465 156119286 - Snph protein_coding retained_intron MGP_129S1SvImJ_T0055772.1 MGP_129S1SvImJ_G0025979.1 mouse_genomes_project 2 87655256 87656198 - MGP_129S1SvImJ_P0055772 Olfr1087 protein_coding protein_coding MGP_129S1SvImJ_T0013598.1 MGP_129S1SvImJ_G0011687.1 mouse_genomes_project 2 69752266 69752891 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054572.1 MGP_129S1SvImJ_G0025703.1 mouse_genomes_project 2 37346453 37408364 - MGP_129S1SvImJ_P0054572 Psmb7 protein_coding protein_coding MGP_129S1SvImJ_T0054573.1 MGP_129S1SvImJ_G0025703.1 mouse_genomes_project 2 37372861 37408197 - Psmb7 protein_coding retained_intron MGP_129S1SvImJ_T0059938.1 MGP_129S1SvImJ_G0027032.1 mouse_genomes_project 2 188292572 188294377 - MGP_129S1SvImJ_P0059938 Sox18 protein_coding protein_coding MGP_129S1SvImJ_T0057601.1 MGP_129S1SvImJ_G0026489.1 mouse_genomes_project 2 132864108 132939656 - MGP_129S1SvImJ_P0057601 F830045P16Rik protein_coding protein_coding MGP_129S1SvImJ_T0055729.1 MGP_129S1SvImJ_G0025938.1 mouse_genomes_project 2 86564053 86564992 + MGP_129S1SvImJ_P0055729 Olfr1015 protein_coding protein_coding MGP_129S1SvImJ_T0004140.1 MGP_129S1SvImJ_G0003662.1 mouse_genomes_project 2 156026315 156027933 - Gm14167 antisense antisense MGP_129S1SvImJ_T0013846.1 MGP_129S1SvImJ_G0011935.1 mouse_genomes_project 2 160308281 160308607 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055748.1 MGP_129S1SvImJ_G0025956.1 mouse_genomes_project 2 86989396 86990338 - MGP_129S1SvImJ_P0055748 Olfr1042 protein_coding protein_coding MGP_129S1SvImJ_T0010479.1 MGP_129S1SvImJ_G0008595.1 mouse_genomes_project 2 142659122 142659201 + Mir1952 miRNA miRNA MGP_129S1SvImJ_T0098574.1 MGP_129S1SvImJ_G0036659.1 mouse_genomes_project 2 172313612 172313728 - Gm23152 rRNA rRNA MGP_129S1SvImJ_T0059433.1 MGP_129S1SvImJ_G0026919.1 mouse_genomes_project 2 173724872 173770955 + Ptpn1 protein_coding processed_transcript MGP_129S1SvImJ_T0059434.1 MGP_129S1SvImJ_G0026919.1 mouse_genomes_project 2 173725142 173775604 + MGP_129S1SvImJ_P0059434 Ptpn1 protein_coding protein_coding MGP_129S1SvImJ_T0059435.1 MGP_129S1SvImJ_G0026919.1 mouse_genomes_project 2 173725187 173763992 + Ptpn1 protein_coding processed_transcript MGP_129S1SvImJ_T0059436.1 MGP_129S1SvImJ_G0026919.1 mouse_genomes_project 2 173725187 173775604 + Ptpn1 protein_coding processed_transcript MGP_129S1SvImJ_T0059437.1 MGP_129S1SvImJ_G0026919.1 mouse_genomes_project 2 173725210 173759895 + Ptpn1 protein_coding processed_transcript MGP_129S1SvImJ_T0059438.1 MGP_129S1SvImJ_G0026919.1 mouse_genomes_project 2 173725210 173763940 + Ptpn1 protein_coding processed_transcript MGP_129S1SvImJ_T0059439.1 MGP_129S1SvImJ_G0026919.1 mouse_genomes_project 2 173747312 173761275 + Ptpn1 protein_coding processed_transcript MGP_129S1SvImJ_T0055139.1 MGP_129S1SvImJ_G0025802.1 mouse_genomes_project 2 69670107 69695837 - MGP_129S1SvImJ_P0055139 Fastkd1 protein_coding protein_coding MGP_129S1SvImJ_T0055140.1 MGP_129S1SvImJ_G0025802.1 mouse_genomes_project 2 69670229 69695692 - MGP_129S1SvImJ_P0055140 Fastkd1 protein_coding protein_coding MGP_129S1SvImJ_T0055141.1 MGP_129S1SvImJ_G0025802.1 mouse_genomes_project 2 69688356 69696772 - Fastkd1 protein_coding retained_intron MGP_129S1SvImJ_T0055142.1 MGP_129S1SvImJ_G0025802.1 mouse_genomes_project 2 69693024 69696790 - Fastkd1 protein_coding retained_intron MGP_129S1SvImJ_T0102023.1 MGP_129S1SvImJ_G0039870.1 mouse_genomes_project 2 148561567 148569969 + unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0102024.1 MGP_129S1SvImJ_G0039870.1 mouse_genomes_project 2 148566578 148603498 + unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0102025.1 MGP_129S1SvImJ_G0039870.1 mouse_genomes_project 2 148566643 148568907 + unitary_pseudogene unitary_pseudogene MGP_129S1SvImJ_T0102026.1 MGP_129S1SvImJ_G0039870.1 mouse_genomes_project 2 148567358 148568914 + unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0059506.1 MGP_129S1SvImJ_G0026934.1 mouse_genomes_project 2 176389615 176475368 - MGP_129S1SvImJ_P0059506 Bcas1 protein_coding protein_coding MGP_129S1SvImJ_T0059507.1 MGP_129S1SvImJ_G0026934.1 mouse_genomes_project 2 176389767 176468202 - MGP_129S1SvImJ_P0059507 Bcas1 protein_coding protein_coding MGP_129S1SvImJ_T0059508.1 MGP_129S1SvImJ_G0026934.1 mouse_genomes_project 2 176389768 176475368 - MGP_129S1SvImJ_P0059508 Bcas1 protein_coding protein_coding MGP_129S1SvImJ_T0059509.1 MGP_129S1SvImJ_G0026934.1 mouse_genomes_project 2 176390555 176392365 - Bcas1 protein_coding processed_transcript MGP_129S1SvImJ_T0059510.1 MGP_129S1SvImJ_G0026934.1 mouse_genomes_project 2 176390569 176399731 - Bcas1 protein_coding processed_transcript MGP_129S1SvImJ_T0059511.1 MGP_129S1SvImJ_G0026934.1 mouse_genomes_project 2 176390713 176392420 - Bcas1 protein_coding processed_transcript MGP_129S1SvImJ_T0059512.1 MGP_129S1SvImJ_G0026934.1 mouse_genomes_project 2 176434663 176435696 - Bcas1 protein_coding processed_transcript MGP_129S1SvImJ_T0059513.1 MGP_129S1SvImJ_G0026934.1 mouse_genomes_project 2 176445136 176475368 - Bcas1 protein_coding processed_transcript MGP_129S1SvImJ_T0013744.1 MGP_129S1SvImJ_G0011833.1 mouse_genomes_project 2 119877637 119878196 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099677.1 MGP_129S1SvImJ_G0037744.1 mouse_genomes_project 2 71613580 71613684 + Gm23253 snRNA snRNA MGP_129S1SvImJ_T0056584.1 MGP_129S1SvImJ_G0026237.1 mouse_genomes_project 2 109533731 109541595 + MGP_129S1SvImJ_P0056584 Kcna4 protein_coding protein_coding MGP_129S1SvImJ_T0056585.1 MGP_129S1SvImJ_G0026237.1 mouse_genomes_project 2 109534487 109537565 + Kcna4 protein_coding processed_transcript MGP_129S1SvImJ_T0003907.1 MGP_129S1SvImJ_G0003495.1 mouse_genomes_project 2 1502067 1510325 - Gm13175 antisense antisense MGP_129S1SvImJ_T0007375.1 MGP_129S1SvImJ_G0006050.1 mouse_genomes_project 2 161476355 161483045 + Gm14168 lincRNA lincRNA MGP_129S1SvImJ_T0056638.1 MGP_129S1SvImJ_G0026253.1 mouse_genomes_project 2 113655816 113656755 + MGP_129S1SvImJ_P0056638 Olfr1276 protein_coding protein_coding MGP_129S1SvImJ_T0057820.1 MGP_129S1SvImJ_G0026533.1 mouse_genomes_project 2 135404439 135410489 - MGP_129S1SvImJ_P0057820 Erv3 protein_coding protein_coding MGP_129S1SvImJ_T0057293.1 MGP_129S1SvImJ_G0026413.1 mouse_genomes_project 2 125317255 125348516 + MGP_129S1SvImJ_P0057293 protein_coding protein_coding MGP_129S1SvImJ_T0057905.1 MGP_129S1SvImJ_G0026555.1 mouse_genomes_project 2 139390241 139486197 + Plcb4 protein_coding processed_transcript MGP_129S1SvImJ_T0057906.1 MGP_129S1SvImJ_G0026555.1 mouse_genomes_project 2 139391839 139486284 + Plcb4 protein_coding processed_transcript MGP_129S1SvImJ_T0057907.1 MGP_129S1SvImJ_G0026555.1 mouse_genomes_project 2 139391860 139628929 + Plcb4 protein_coding retained_intron MGP_129S1SvImJ_T0057908.1 MGP_129S1SvImJ_G0026555.1 mouse_genomes_project 2 139391956 139737892 + MGP_129S1SvImJ_P0057908 Plcb4 protein_coding protein_coding MGP_129S1SvImJ_T0057909.1 MGP_129S1SvImJ_G0026555.1 mouse_genomes_project 2 139485275 139663256 + Plcb4 protein_coding retained_intron MGP_129S1SvImJ_T0057910.1 MGP_129S1SvImJ_G0026555.1 mouse_genomes_project 2 139485275 139771665 + MGP_129S1SvImJ_P0057910 Plcb4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057911.1 MGP_129S1SvImJ_G0026555.1 mouse_genomes_project 2 139511309 139660630 + Plcb4 protein_coding processed_transcript MGP_129S1SvImJ_T0057912.1 MGP_129S1SvImJ_G0026555.1 mouse_genomes_project 2 139554411 139771464 + MGP_129S1SvImJ_P0057912 Plcb4 protein_coding protein_coding MGP_129S1SvImJ_T0057913.1 MGP_129S1SvImJ_G0026555.1 mouse_genomes_project 2 139623546 139773302 + MGP_129S1SvImJ_P0057913 Plcb4 protein_coding protein_coding MGP_129S1SvImJ_T0057914.1 MGP_129S1SvImJ_G0026555.1 mouse_genomes_project 2 139638800 139693017 + Plcb4 protein_coding processed_transcript MGP_129S1SvImJ_T0057915.1 MGP_129S1SvImJ_G0026555.1 mouse_genomes_project 2 139695783 139704064 + Plcb4 protein_coding processed_transcript MGP_129S1SvImJ_T0057916.1 MGP_129S1SvImJ_G0026555.1 mouse_genomes_project 2 139700181 139704017 + Plcb4 protein_coding processed_transcript MGP_129S1SvImJ_T0057917.1 MGP_129S1SvImJ_G0026555.1 mouse_genomes_project 2 139737907 139743075 + Plcb4 protein_coding processed_transcript MGP_129S1SvImJ_T0057918.1 MGP_129S1SvImJ_G0026555.1 mouse_genomes_project 2 139742754 139773293 + MGP_129S1SvImJ_P0057918 Plcb4 protein_coding protein_coding MGP_129S1SvImJ_T0057919.1 MGP_129S1SvImJ_G0026555.1 mouse_genomes_project 2 139765625 139766439 + Plcb4 protein_coding processed_transcript MGP_129S1SvImJ_T0007309.1 MGP_129S1SvImJ_G0005996.1 mouse_genomes_project 2 118636306 118655005 + G630016G05Rik lincRNA lincRNA MGP_129S1SvImJ_T0007310.1 MGP_129S1SvImJ_G0005996.1 mouse_genomes_project 2 118637048 118655004 + G630016G05Rik lincRNA lincRNA MGP_129S1SvImJ_T0013897.1 MGP_129S1SvImJ_G0011986.1 mouse_genomes_project 2 181541249 181541486 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058259.1 MGP_129S1SvImJ_G0026645.1 mouse_genomes_project 2 156209123 156235926 - MGP_129S1SvImJ_P0058259 Psmf1 protein_coding protein_coding MGP_129S1SvImJ_T0058260.1 MGP_129S1SvImJ_G0026645.1 mouse_genomes_project 2 156209373 156214321 - Psmf1 protein_coding retained_intron MGP_129S1SvImJ_T0058261.1 MGP_129S1SvImJ_G0026645.1 mouse_genomes_project 2 156209373 156235909 - MGP_129S1SvImJ_P0058261 Psmf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058262.1 MGP_129S1SvImJ_G0026645.1 mouse_genomes_project 2 156211576 156238802 - MGP_129S1SvImJ_P0058262 Psmf1 protein_coding protein_coding MGP_129S1SvImJ_T0058263.1 MGP_129S1SvImJ_G0026645.1 mouse_genomes_project 2 156212796 156224408 - Psmf1 protein_coding retained_intron MGP_129S1SvImJ_T0058264.1 MGP_129S1SvImJ_G0026645.1 mouse_genomes_project 2 156221944 156235909 - Psmf1 protein_coding retained_intron MGP_129S1SvImJ_T0102411.1 MGP_129S1SvImJ_G0040245.1 mouse_genomes_project 2 87452964 87453906 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0052672.1 MGP_129S1SvImJ_G0025363.1 mouse_genomes_project 2 11912258 12010275 + MGP_129S1SvImJ_P0052672 Slc39a12 protein_coding protein_coding MGP_129S1SvImJ_T0052673.1 MGP_129S1SvImJ_G0025363.1 mouse_genomes_project 2 11912454 11913482 + MGP_129S1SvImJ_P0052673 Slc39a12 protein_coding protein_coding MGP_129S1SvImJ_T0058782.1 MGP_129S1SvImJ_G0026766.1 mouse_genomes_project 2 161522347 161683954 + MGP_129S1SvImJ_P0058782 Dlgap4 protein_coding protein_coding MGP_129S1SvImJ_T0058783.1 MGP_129S1SvImJ_G0026766.1 mouse_genomes_project 2 161522347 161683956 + MGP_129S1SvImJ_P0058783 Dlgap4 protein_coding protein_coding MGP_129S1SvImJ_T0058784.1 MGP_129S1SvImJ_G0026766.1 mouse_genomes_project 2 161615919 161682772 + MGP_129S1SvImJ_P0058784 Dlgap4 protein_coding protein_coding MGP_129S1SvImJ_T0058785.1 MGP_129S1SvImJ_G0026766.1 mouse_genomes_project 2 161615919 161682767 + MGP_129S1SvImJ_P0058785 Dlgap4 protein_coding protein_coding MGP_129S1SvImJ_T0058786.1 MGP_129S1SvImJ_G0026766.1 mouse_genomes_project 2 161638663 161670138 + MGP_129S1SvImJ_P0058786 Dlgap4 protein_coding protein_coding MGP_129S1SvImJ_T0058787.1 MGP_129S1SvImJ_G0026766.1 mouse_genomes_project 2 161639137 161682548 + Dlgap4 protein_coding retained_intron MGP_129S1SvImJ_T0058788.1 MGP_129S1SvImJ_G0026766.1 mouse_genomes_project 2 161639148 161670379 + MGP_129S1SvImJ_P0058788 Dlgap4 protein_coding protein_coding MGP_129S1SvImJ_T0058789.1 MGP_129S1SvImJ_G0026766.1 mouse_genomes_project 2 161639151 161670216 + MGP_129S1SvImJ_P0058789 Dlgap4 protein_coding protein_coding MGP_129S1SvImJ_T0058790.1 MGP_129S1SvImJ_G0026766.1 mouse_genomes_project 2 161639153 161682437 + MGP_129S1SvImJ_P0058790 Dlgap4 protein_coding protein_coding MGP_129S1SvImJ_T0058791.1 MGP_129S1SvImJ_G0026766.1 mouse_genomes_project 2 161639161 161682496 + MGP_129S1SvImJ_P0058791 Dlgap4 protein_coding protein_coding MGP_129S1SvImJ_T0058792.1 MGP_129S1SvImJ_G0026766.1 mouse_genomes_project 2 161639586 161683956 + MGP_129S1SvImJ_P0058792 Dlgap4 protein_coding protein_coding MGP_129S1SvImJ_T0058793.1 MGP_129S1SvImJ_G0026766.1 mouse_genomes_project 2 161669391 161683963 + MGP_129S1SvImJ_P0058793 Dlgap4 protein_coding protein_coding MGP_129S1SvImJ_T0058794.1 MGP_129S1SvImJ_G0026766.1 mouse_genomes_project 2 161679519 161682372 + Dlgap4 protein_coding processed_transcript MGP_129S1SvImJ_T0059633.1 MGP_129S1SvImJ_G0026973.1 mouse_genomes_project 2 181353493 181353984 + MGP_129S1SvImJ_P0059633 protein_coding protein_coding MGP_129S1SvImJ_T0056648.1 MGP_129S1SvImJ_G0026263.1 mouse_genomes_project 2 113915372 113916311 + MGP_129S1SvImJ_P0056648 Olfr1288 protein_coding protein_coding MGP_129S1SvImJ_T0056482.1 MGP_129S1SvImJ_G0026214.1 mouse_genomes_project 2 106112086 106173935 + MGP_129S1SvImJ_P0056482 Cd59b protein_coding protein_coding MGP_129S1SvImJ_T0055834.1 MGP_129S1SvImJ_G0026030.1 mouse_genomes_project 2 88930254 88931428 + MGP_129S1SvImJ_P0055834 Olfr1151 protein_coding protein_coding MGP_129S1SvImJ_T0055138.1 MGP_129S1SvImJ_G0025801.1 mouse_genomes_project 2 69652521 69666911 + MGP_129S1SvImJ_P0055138 Klhl41 protein_coding protein_coding MGP_129S1SvImJ_T0013652.1 MGP_129S1SvImJ_G0011741.1 mouse_genomes_project 2 88112658 88113193 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004070.1 MGP_129S1SvImJ_G0003612.1 mouse_genomes_project 2 112390086 112410431 - Ccdc34os antisense antisense MGP_129S1SvImJ_T0004071.1 MGP_129S1SvImJ_G0003612.1 mouse_genomes_project 2 112390087 112410434 - Ccdc34os antisense antisense MGP_129S1SvImJ_T0004033.1 MGP_129S1SvImJ_G0003590.1 mouse_genomes_project 2 73886002 73905958 + Chn1os3 antisense antisense MGP_129S1SvImJ_T0004034.1 MGP_129S1SvImJ_G0003590.1 mouse_genomes_project 2 73886300 73888677 + Chn1os3 antisense antisense MGP_129S1SvImJ_T0017956.1 MGP_129S1SvImJ_G0015495.1 mouse_genomes_project 2 179266990 179267443 - Gm20490 processed_transcript processed_transcript MGP_129S1SvImJ_T0004051.1 MGP_129S1SvImJ_G0003602.1 mouse_genomes_project 2 90110704 90118074 - Gm13763 antisense antisense MGP_129S1SvImJ_T0057625.1 MGP_129S1SvImJ_G0026495.1 mouse_genomes_project 2 133613856 133621753 - Snrpb protein_coding retained_intron MGP_129S1SvImJ_T0057626.1 MGP_129S1SvImJ_G0026495.1 mouse_genomes_project 2 133614077 133621853 - MGP_129S1SvImJ_P0057626 Snrpb protein_coding protein_coding MGP_129S1SvImJ_T0057627.1 MGP_129S1SvImJ_G0026495.1 mouse_genomes_project 2 133614229 133621853 - MGP_129S1SvImJ_P0057627 Snrpb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057628.1 MGP_129S1SvImJ_G0026495.1 mouse_genomes_project 2 133619301 133621784 - Snrpb protein_coding retained_intron MGP_129S1SvImJ_T0102377.1 MGP_129S1SvImJ_G0040211.1 mouse_genomes_project 2 18851433 18952909 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099661.1 MGP_129S1SvImJ_G0037728.1 mouse_genomes_project 2 23071916 23072021 + Gm22572 snRNA snRNA MGP_129S1SvImJ_T0011547.1 MGP_129S1SvImJ_G0009663.1 mouse_genomes_project 2 180641226 180641351 + Gm27849 misc_RNA misc_RNA MGP_129S1SvImJ_T0058187.1 MGP_129S1SvImJ_G0026630.1 mouse_genomes_project 2 155192181 155216812 + MGP_129S1SvImJ_P0058187 Entpd6 protein_coding protein_coding MGP_129S1SvImJ_T0058188.1 MGP_129S1SvImJ_G0026630.1 mouse_genomes_project 2 155192220 155208493 + Entpd6 protein_coding retained_intron MGP_129S1SvImJ_T0058189.1 MGP_129S1SvImJ_G0026630.1 mouse_genomes_project 2 155192231 155208949 + Entpd6 protein_coding processed_transcript MGP_129S1SvImJ_T0058190.1 MGP_129S1SvImJ_G0026630.1 mouse_genomes_project 2 155192310 155196364 + Entpd6 protein_coding processed_transcript MGP_129S1SvImJ_T0055188.1 MGP_129S1SvImJ_G0025811.1 mouse_genomes_project 2 70520119 70522923 + MGP_129S1SvImJ_P0055188 Sp5 protein_coding protein_coding MGP_129S1SvImJ_T0053545.1 MGP_129S1SvImJ_G0025523.1 mouse_genomes_project 2 26554104 26560470 + Gbgt1 protein_coding processed_transcript MGP_129S1SvImJ_T0053546.1 MGP_129S1SvImJ_G0025523.1 mouse_genomes_project 2 26554104 26562623 + MGP_129S1SvImJ_P0053546 Gbgt1 protein_coding protein_coding MGP_129S1SvImJ_T0053547.1 MGP_129S1SvImJ_G0025523.1 mouse_genomes_project 2 26554945 26562623 + MGP_129S1SvImJ_P0053547 Gbgt1 protein_coding protein_coding MGP_129S1SvImJ_T0058317.1 MGP_129S1SvImJ_G0026670.1 mouse_genomes_project 2 157156491 157162696 - Defb45 protein_coding processed_transcript MGP_129S1SvImJ_T0058318.1 MGP_129S1SvImJ_G0026670.1 mouse_genomes_project 2 157156491 157159779 - MGP_129S1SvImJ_P0058318 Defb45 protein_coding protein_coding MGP_129S1SvImJ_T0058645.1 MGP_129S1SvImJ_G0026751.1 mouse_genomes_project 2 160830594 160865681 - MGP_129S1SvImJ_P0058645 6430550D23Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058650.1 MGP_129S1SvImJ_G0026751.1 mouse_genomes_project 2 160858206 160862221 - MGP_129S1SvImJ_P0058650 6430550D23Rik protein_coding protein_coding MGP_129S1SvImJ_T0058651.1 MGP_129S1SvImJ_G0026751.1 mouse_genomes_project 2 160858373 160865697 - 6430550D23Rik protein_coding retained_intron MGP_129S1SvImJ_T0058652.1 MGP_129S1SvImJ_G0026751.1 mouse_genomes_project 2 160860252 160865698 - MGP_129S1SvImJ_P0058652 6430550D23Rik protein_coding protein_coding MGP_129S1SvImJ_T0058653.1 MGP_129S1SvImJ_G0026751.1 mouse_genomes_project 2 160860936 160865693 - MGP_129S1SvImJ_P0058653 6430550D23Rik protein_coding protein_coding MGP_129S1SvImJ_T0058654.1 MGP_129S1SvImJ_G0026751.1 mouse_genomes_project 2 160861029 160865751 - MGP_129S1SvImJ_P0058654 6430550D23Rik protein_coding protein_coding MGP_129S1SvImJ_T0058655.1 MGP_129S1SvImJ_G0026751.1 mouse_genomes_project 2 160861116 160862221 - MGP_129S1SvImJ_P0058655 6430550D23Rik protein_coding protein_coding MGP_129S1SvImJ_T0058656.1 MGP_129S1SvImJ_G0026751.1 mouse_genomes_project 2 160861159 160861930 - MGP_129S1SvImJ_P0058656 6430550D23Rik protein_coding protein_coding MGP_129S1SvImJ_T0058657.1 MGP_129S1SvImJ_G0026751.1 mouse_genomes_project 2 160861191 160861930 - MGP_129S1SvImJ_P0058657 6430550D23Rik protein_coding protein_coding MGP_129S1SvImJ_T0055764.1 MGP_129S1SvImJ_G0025972.1 mouse_genomes_project 2 87366267 87367209 - MGP_129S1SvImJ_P0055764 Olfr1061 protein_coding protein_coding MGP_129S1SvImJ_T0011546.1 MGP_129S1SvImJ_G0009662.1 mouse_genomes_project 2 180640960 180641082 + Gm27869 misc_RNA misc_RNA MGP_129S1SvImJ_T0057072.1 MGP_129S1SvImJ_G0026372.1 mouse_genomes_project 2 123500174 123553307 + MGP_129S1SvImJ_P0057072 protein_coding protein_coding MGP_129S1SvImJ_T0057073.1 MGP_129S1SvImJ_G0026372.1 mouse_genomes_project 2 123500272 123589897 + MGP_129S1SvImJ_P0057073 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0057074.1 MGP_129S1SvImJ_G0026372.1 mouse_genomes_project 2 123500272 123590140 + MGP_129S1SvImJ_P0057074 protein_coding protein_coding MGP_129S1SvImJ_T0057075.1 MGP_129S1SvImJ_G0026372.1 mouse_genomes_project 2 123556557 123590140 + MGP_129S1SvImJ_P0057075 protein_coding protein_coding MGP_129S1SvImJ_T0057076.1 MGP_129S1SvImJ_G0026372.1 mouse_genomes_project 2 123573147 123589890 + MGP_129S1SvImJ_P0057076 protein_coding protein_coding MGP_129S1SvImJ_T0057077.1 MGP_129S1SvImJ_G0026372.1 mouse_genomes_project 2 123576398 123607025 + MGP_129S1SvImJ_P0057077 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057078.1 MGP_129S1SvImJ_G0026372.1 mouse_genomes_project 2 123587771 123589938 + protein_coding retained_intron MGP_129S1SvImJ_T0057079.1 MGP_129S1SvImJ_G0026372.1 mouse_genomes_project 2 123589325 123604495 + protein_coding processed_transcript MGP_129S1SvImJ_T0054301.1 MGP_129S1SvImJ_G0025637.1 mouse_genomes_project 2 32730986 32959064 - MGP_129S1SvImJ_P0054301 Pbx3 protein_coding protein_coding MGP_129S1SvImJ_T0054302.1 MGP_129S1SvImJ_G0025637.1 mouse_genomes_project 2 32732401 32865949 - Pbx3 protein_coding processed_transcript MGP_129S1SvImJ_T0054303.1 MGP_129S1SvImJ_G0025637.1 mouse_genomes_project 2 32732409 32959064 - MGP_129S1SvImJ_P0054303 Pbx3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054304.1 MGP_129S1SvImJ_G0025637.1 mouse_genomes_project 2 32732409 32959064 - MGP_129S1SvImJ_P0054304 Pbx3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054305.1 MGP_129S1SvImJ_G0025637.1 mouse_genomes_project 2 32736387 32957990 - MGP_129S1SvImJ_P0054305 Pbx3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054306.1 MGP_129S1SvImJ_G0025637.1 mouse_genomes_project 2 32785930 32960286 - MGP_129S1SvImJ_P0054306 Pbx3 protein_coding protein_coding MGP_129S1SvImJ_T0054307.1 MGP_129S1SvImJ_G0025637.1 mouse_genomes_project 2 32796925 32958397 - MGP_129S1SvImJ_P0054307 Pbx3 protein_coding protein_coding MGP_129S1SvImJ_T0054308.1 MGP_129S1SvImJ_G0025637.1 mouse_genomes_project 2 32797052 32958294 - MGP_129S1SvImJ_P0054308 Pbx3 protein_coding protein_coding MGP_129S1SvImJ_T0054309.1 MGP_129S1SvImJ_G0025637.1 mouse_genomes_project 2 32955255 32958936 - Pbx3 protein_coding retained_intron MGP_129S1SvImJ_T0052763.1 MGP_129S1SvImJ_G0025376.1 mouse_genomes_project 2 16391652 16402922 + MGP_129S1SvImJ_P0052763 Bmi1 protein_coding protein_coding MGP_129S1SvImJ_T0052764.1 MGP_129S1SvImJ_G0025376.1 mouse_genomes_project 2 16391851 16398004 + Bmi1 protein_coding processed_transcript MGP_129S1SvImJ_T0052765.1 MGP_129S1SvImJ_G0025376.1 mouse_genomes_project 2 16393449 16399315 + MGP_129S1SvImJ_P0052765 Bmi1 protein_coding protein_coding MGP_129S1SvImJ_T0052766.1 MGP_129S1SvImJ_G0025376.1 mouse_genomes_project 2 16396010 16402423 + MGP_129S1SvImJ_P0052766 Bmi1 protein_coding protein_coding MGP_129S1SvImJ_T0052767.1 MGP_129S1SvImJ_G0025376.1 mouse_genomes_project 2 16396012 16399652 + MGP_129S1SvImJ_P0052767 Bmi1 protein_coding protein_coding MGP_129S1SvImJ_T0052768.1 MGP_129S1SvImJ_G0025376.1 mouse_genomes_project 2 16396632 16398669 + MGP_129S1SvImJ_P0052768 Bmi1 protein_coding protein_coding MGP_129S1SvImJ_T0052769.1 MGP_129S1SvImJ_G0025376.1 mouse_genomes_project 2 16396745 16398495 + MGP_129S1SvImJ_P0052769 Bmi1 protein_coding protein_coding MGP_129S1SvImJ_T0004093.1 MGP_129S1SvImJ_G0003630.1 mouse_genomes_project 2 129902552 129911279 + Gm27003 antisense antisense MGP_129S1SvImJ_T0017923.1 MGP_129S1SvImJ_G0015481.1 mouse_genomes_project 2 161631269 161639001 - 4930405A21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017924.1 MGP_129S1SvImJ_G0015481.1 mouse_genomes_project 2 161632681 161638918 - 4930405A21Rik processed_transcript retained_intron MGP_129S1SvImJ_T0056251.1 MGP_129S1SvImJ_G0026170.1 mouse_genomes_project 2 94044123 94059636 + MGP_129S1SvImJ_P0056251 Chst1 protein_coding protein_coding MGP_129S1SvImJ_T0057824.1 MGP_129S1SvImJ_G0026536.1 mouse_genomes_project 2 135505995 135511264 + MGP_129S1SvImJ_P0057824 Prnd protein_coding protein_coding MGP_129S1SvImJ_T0057825.1 MGP_129S1SvImJ_G0026536.1 mouse_genomes_project 2 135505996 135511264 + MGP_129S1SvImJ_P0057825 Prnd protein_coding protein_coding MGP_129S1SvImJ_T0057826.1 MGP_129S1SvImJ_G0026536.1 mouse_genomes_project 2 135505996 135511264 + MGP_129S1SvImJ_P0057826 Prnd protein_coding protein_coding MGP_129S1SvImJ_T0057827.1 MGP_129S1SvImJ_G0026536.1 mouse_genomes_project 2 135506171 135511264 + MGP_129S1SvImJ_P0057827 Prnd protein_coding protein_coding MGP_129S1SvImJ_T0010444.1 MGP_129S1SvImJ_G0008560.1 mouse_genomes_project 2 85431235 85431299 - Mir130a miRNA miRNA MGP_129S1SvImJ_T0013535.1 MGP_129S1SvImJ_G0011624.1 mouse_genomes_project 2 48338058 48338487 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001092.1 MGP_129S1SvImJ_G0001021.1 mouse_genomes_project 2 36740409 36744359 - TEC TEC MGP_129S1SvImJ_T0013513.1 MGP_129S1SvImJ_G0011602.1 mouse_genomes_project 2 38032473 38032836 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013580.1 MGP_129S1SvImJ_G0011669.1 mouse_genomes_project 2 61636532 61636851 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056413.1 MGP_129S1SvImJ_G0026202.1 mouse_genomes_project 2 105235474 105275723 - MGP_129S1SvImJ_P0056413 Ehf protein_coding protein_coding MGP_129S1SvImJ_T0056414.1 MGP_129S1SvImJ_G0026202.1 mouse_genomes_project 2 105236066 105275611 - MGP_129S1SvImJ_P0056414 Ehf protein_coding protein_coding MGP_129S1SvImJ_T0056415.1 MGP_129S1SvImJ_G0026202.1 mouse_genomes_project 2 105238552 105256234 - MGP_129S1SvImJ_P0056415 Ehf protein_coding protein_coding MGP_129S1SvImJ_T0056416.1 MGP_129S1SvImJ_G0026202.1 mouse_genomes_project 2 105238749 105246308 - Ehf protein_coding retained_intron MGP_129S1SvImJ_T0056417.1 MGP_129S1SvImJ_G0026202.1 mouse_genomes_project 2 105239117 105272010 - MGP_129S1SvImJ_P0056417 Ehf protein_coding protein_coding MGP_129S1SvImJ_T0056418.1 MGP_129S1SvImJ_G0026202.1 mouse_genomes_project 2 105246159 105263411 - MGP_129S1SvImJ_P0056418 Ehf protein_coding protein_coding MGP_129S1SvImJ_T0056419.1 MGP_129S1SvImJ_G0026202.1 mouse_genomes_project 2 105248849 105275365 - MGP_129S1SvImJ_P0056419 Ehf protein_coding protein_coding MGP_129S1SvImJ_T0056420.1 MGP_129S1SvImJ_G0026202.1 mouse_genomes_project 2 105251152 105275612 - Ehf protein_coding retained_intron MGP_129S1SvImJ_T0011545.1 MGP_129S1SvImJ_G0009661.1 mouse_genomes_project 2 180632651 180632715 + Gm27899 misc_RNA misc_RNA MGP_129S1SvImJ_T0017786.1 MGP_129S1SvImJ_G0015406.1 mouse_genomes_project 2 26035290 26040312 - Gm13372 processed_transcript processed_transcript MGP_129S1SvImJ_T0003966.1 MGP_129S1SvImJ_G0003541.1 mouse_genomes_project 2 30275987 30281471 - Gm13441 antisense antisense MGP_129S1SvImJ_T0010409.1 MGP_129S1SvImJ_G0008525.1 mouse_genomes_project 2 28189611 28189682 + Mir6997 miRNA miRNA MGP_129S1SvImJ_T0004073.1 MGP_129S1SvImJ_G0003614.1 mouse_genomes_project 2 115913584 115915208 - Gm13966 antisense antisense MGP_129S1SvImJ_T0052331.1 MGP_129S1SvImJ_G0025309.1 mouse_genomes_project 2 437205 457222 - MGP_129S1SvImJ_P0052331 Suv39h2 protein_coding protein_coding MGP_129S1SvImJ_T0052332.1 MGP_129S1SvImJ_G0025309.1 mouse_genomes_project 2 439012 457151 - MGP_129S1SvImJ_P0052332 Suv39h2 protein_coding protein_coding MGP_129S1SvImJ_T0052333.1 MGP_129S1SvImJ_G0025309.1 mouse_genomes_project 2 439013 456610 - MGP_129S1SvImJ_P0052333 Suv39h2 protein_coding protein_coding MGP_129S1SvImJ_T0052334.1 MGP_129S1SvImJ_G0025309.1 mouse_genomes_project 2 439035 457160 - MGP_129S1SvImJ_P0052334 Suv39h2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055209.1 MGP_129S1SvImJ_G0025816.1 mouse_genomes_project 2 70772298 70887201 - Tlk1 protein_coding processed_transcript MGP_129S1SvImJ_T0055210.1 MGP_129S1SvImJ_G0025816.1 mouse_genomes_project 2 70772298 70888741 - MGP_129S1SvImJ_P0055210 Tlk1 protein_coding protein_coding MGP_129S1SvImJ_T0055211.1 MGP_129S1SvImJ_G0025816.1 mouse_genomes_project 2 70774032 70778116 - Tlk1 protein_coding processed_transcript MGP_129S1SvImJ_T0055212.1 MGP_129S1SvImJ_G0025816.1 mouse_genomes_project 2 70776203 70777796 - Tlk1 protein_coding processed_transcript MGP_129S1SvImJ_T0055213.1 MGP_129S1SvImJ_G0025816.1 mouse_genomes_project 2 70807274 70887127 - Tlk1 protein_coding processed_transcript MGP_129S1SvImJ_T0055214.1 MGP_129S1SvImJ_G0025816.1 mouse_genomes_project 2 70810510 70887115 - Tlk1 protein_coding processed_transcript MGP_129S1SvImJ_T0055215.1 MGP_129S1SvImJ_G0025816.1 mouse_genomes_project 2 70812269 70887032 - Tlk1 protein_coding processed_transcript MGP_129S1SvImJ_T0004138.1 MGP_129S1SvImJ_G0003660.1 mouse_genomes_project 2 151453829 151454813 + 6430503K07Rik antisense antisense MGP_129S1SvImJ_T0057203.1 MGP_129S1SvImJ_G0026389.1 mouse_genomes_project 2 124253631 124270885 - MGP_129S1SvImJ_P0057203 Strc protein_coding protein_coding MGP_129S1SvImJ_T0057204.1 MGP_129S1SvImJ_G0026389.1 mouse_genomes_project 2 124258338 124264956 - MGP_129S1SvImJ_P0057204 Strc protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057205.1 MGP_129S1SvImJ_G0026389.1 mouse_genomes_project 2 124262815 124264940 - Strc protein_coding processed_transcript MGP_129S1SvImJ_T0057206.1 MGP_129S1SvImJ_G0026389.1 mouse_genomes_project 2 124262894 124264719 - Strc protein_coding retained_intron MGP_129S1SvImJ_T0057207.1 MGP_129S1SvImJ_G0026389.1 mouse_genomes_project 2 124266272 124278250 - Strc protein_coding retained_intron MGP_129S1SvImJ_T0054506.1 MGP_129S1SvImJ_G0025689.1 mouse_genomes_project 2 35873038 35874671 + MGP_129S1SvImJ_P0054506 protein_coding protein_coding MGP_129S1SvImJ_T0017861.1 MGP_129S1SvImJ_G0015452.1 mouse_genomes_project 2 112012245 112013173 + Gm20638 processed_transcript processed_transcript MGP_129S1SvImJ_T0056909.1 MGP_129S1SvImJ_G0026347.1 mouse_genomes_project 2 122432789 122468591 + MGP_129S1SvImJ_P0056909 Nusap1 protein_coding protein_coding MGP_129S1SvImJ_T0056910.1 MGP_129S1SvImJ_G0026347.1 mouse_genomes_project 2 122433185 122451574 + Nusap1 protein_coding processed_transcript MGP_129S1SvImJ_T0056911.1 MGP_129S1SvImJ_G0026347.1 mouse_genomes_project 2 122433208 122469965 + MGP_129S1SvImJ_P0056911 Nusap1 protein_coding protein_coding MGP_129S1SvImJ_T0056912.1 MGP_129S1SvImJ_G0026347.1 mouse_genomes_project 2 122433220 122446189 + Nusap1 protein_coding processed_transcript MGP_129S1SvImJ_T0058435.1 MGP_129S1SvImJ_G0026702.1 mouse_genomes_project 2 158627420 158642166 + MGP_129S1SvImJ_P0058435 Bpifb3 protein_coding protein_coding MGP_129S1SvImJ_T0058436.1 MGP_129S1SvImJ_G0026702.1 mouse_genomes_project 2 158627584 158642163 + MGP_129S1SvImJ_P0058436 Bpifb3 protein_coding protein_coding MGP_129S1SvImJ_T0102439.1 MGP_129S1SvImJ_G0040273.1 mouse_genomes_project 2 124402059 124409155 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0013808.1 MGP_129S1SvImJ_G0011897.1 mouse_genomes_project 2 148333868 148334176 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010408.1 MGP_129S1SvImJ_G0008524.1 mouse_genomes_project 2 28017473 28017538 + Mir219b miRNA miRNA MGP_129S1SvImJ_T0057468.1 MGP_129S1SvImJ_G0026452.1 mouse_genomes_project 2 130480314 130498866 + Snrnp200 protein_coding retained_intron MGP_129S1SvImJ_T0057469.1 MGP_129S1SvImJ_G0026452.1 mouse_genomes_project 2 130480327 130517690 + MGP_129S1SvImJ_P0057469 Snrnp200 protein_coding protein_coding MGP_129S1SvImJ_T0057470.1 MGP_129S1SvImJ_G0026452.1 mouse_genomes_project 2 130497843 130501305 + Snrnp200 protein_coding processed_transcript MGP_129S1SvImJ_T0057471.1 MGP_129S1SvImJ_G0026452.1 mouse_genomes_project 2 130512956 130515540 + Snrnp200 protein_coding retained_intron MGP_129S1SvImJ_T0057472.1 MGP_129S1SvImJ_G0026452.1 mouse_genomes_project 2 130515305 130517199 + Snrnp200 protein_coding retained_intron MGP_129S1SvImJ_T0053729.1 MGP_129S1SvImJ_G0025551.1 mouse_genomes_project 2 28256668 28274845 + MGP_129S1SvImJ_P0053729 Set protein_coding protein_coding MGP_129S1SvImJ_T0053730.1 MGP_129S1SvImJ_G0025551.1 mouse_genomes_project 2 28263515 28274099 + MGP_129S1SvImJ_P0053730 Set protein_coding protein_coding MGP_129S1SvImJ_T0053731.1 MGP_129S1SvImJ_G0025551.1 mouse_genomes_project 2 28264614 28276207 + Set protein_coding processed_transcript MGP_129S1SvImJ_T0053732.1 MGP_129S1SvImJ_G0025551.1 mouse_genomes_project 2 28268831 28275484 + MGP_129S1SvImJ_P0053732 Set protein_coding unknown_likely_coding MGP_129S1SvImJ_T0053733.1 MGP_129S1SvImJ_G0025551.1 mouse_genomes_project 2 28269203 28274172 + Set protein_coding processed_transcript MGP_129S1SvImJ_T0055317.1 MGP_129S1SvImJ_G0025834.1 mouse_genomes_project 2 73540835 73546382 + MGP_129S1SvImJ_P0055317 Sp9 protein_coding protein_coding MGP_129S1SvImJ_T0055318.1 MGP_129S1SvImJ_G0025834.1 mouse_genomes_project 2 73540876 73553617 + Sp9 protein_coding processed_transcript MGP_129S1SvImJ_T0057332.1 MGP_129S1SvImJ_G0026422.1 mouse_genomes_project 2 127229840 127283839 + Sema6d protein_coding retained_intron MGP_129S1SvImJ_T0057333.1 MGP_129S1SvImJ_G0026422.1 mouse_genomes_project 2 127229840 127820639 + MGP_129S1SvImJ_P0057333 Sema6d protein_coding protein_coding MGP_129S1SvImJ_T0057334.1 MGP_129S1SvImJ_G0026422.1 mouse_genomes_project 2 127283490 127652664 + Sema6d protein_coding processed_transcript MGP_129S1SvImJ_T0057335.1 MGP_129S1SvImJ_G0026422.1 mouse_genomes_project 2 127759745 127814147 + Sema6d protein_coding retained_intron MGP_129S1SvImJ_T0057336.1 MGP_129S1SvImJ_G0026422.1 mouse_genomes_project 2 127759935 127820639 + MGP_129S1SvImJ_P0057336 Sema6d protein_coding protein_coding MGP_129S1SvImJ_T0057337.1 MGP_129S1SvImJ_G0026422.1 mouse_genomes_project 2 127759935 127820639 + MGP_129S1SvImJ_P0057337 Sema6d protein_coding protein_coding MGP_129S1SvImJ_T0057338.1 MGP_129S1SvImJ_G0026422.1 mouse_genomes_project 2 127759935 127820639 + MGP_129S1SvImJ_P0057338 Sema6d protein_coding protein_coding MGP_129S1SvImJ_T0057339.1 MGP_129S1SvImJ_G0026422.1 mouse_genomes_project 2 127759935 127817233 + MGP_129S1SvImJ_P0057339 Sema6d protein_coding protein_coding MGP_129S1SvImJ_T0057340.1 MGP_129S1SvImJ_G0026422.1 mouse_genomes_project 2 127760212 127820640 + MGP_129S1SvImJ_P0057340 Sema6d protein_coding protein_coding MGP_129S1SvImJ_T0057341.1 MGP_129S1SvImJ_G0026422.1 mouse_genomes_project 2 127760240 127817233 + MGP_129S1SvImJ_P0057341 Sema6d protein_coding protein_coding MGP_129S1SvImJ_T0057342.1 MGP_129S1SvImJ_G0026422.1 mouse_genomes_project 2 127804896 127816575 + MGP_129S1SvImJ_P0057342 Sema6d protein_coding protein_coding MGP_129S1SvImJ_T0013707.1 MGP_129S1SvImJ_G0011796.1 mouse_genomes_project 2 105838093 105838510 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055776.1 MGP_129S1SvImJ_G0025983.1 mouse_genomes_project 2 87776096 87777103 - MGP_129S1SvImJ_P0055776 protein_coding protein_coding MGP_129S1SvImJ_T0053128.1 MGP_129S1SvImJ_G0025443.1 mouse_genomes_project 2 23280198 23285646 + MGP_129S1SvImJ_P0053128 Entpd2 protein_coding protein_coding MGP_129S1SvImJ_T0053129.1 MGP_129S1SvImJ_G0025443.1 mouse_genomes_project 2 23280240 23285617 + Entpd2 protein_coding processed_transcript MGP_129S1SvImJ_T0053130.1 MGP_129S1SvImJ_G0025443.1 mouse_genomes_project 2 23283077 23284174 + Entpd2 protein_coding processed_transcript MGP_129S1SvImJ_T0004187.1 MGP_129S1SvImJ_G0003699.1 mouse_genomes_project 2 172629859 172630703 + Gm17096 antisense antisense MGP_129S1SvImJ_T0053431.1 MGP_129S1SvImJ_G0025500.1 mouse_genomes_project 2 24885023 24886402 - Surf1 protein_coding retained_intron MGP_129S1SvImJ_T0053432.1 MGP_129S1SvImJ_G0025500.1 mouse_genomes_project 2 24885025 24888173 - MGP_129S1SvImJ_P0053432 Surf1 protein_coding protein_coding MGP_129S1SvImJ_T0053433.1 MGP_129S1SvImJ_G0025500.1 mouse_genomes_project 2 24885025 24888111 - MGP_129S1SvImJ_P0053433 Surf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053434.1 MGP_129S1SvImJ_G0025500.1 mouse_genomes_project 2 24885025 24887943 - MGP_129S1SvImJ_P0053434 Surf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053435.1 MGP_129S1SvImJ_G0025500.1 mouse_genomes_project 2 24885219 24887963 - MGP_129S1SvImJ_P0053435 Surf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053436.1 MGP_129S1SvImJ_G0025500.1 mouse_genomes_project 2 24885219 24887988 - MGP_129S1SvImJ_P0053436 Surf1 protein_coding protein_coding MGP_129S1SvImJ_T0053437.1 MGP_129S1SvImJ_G0025500.1 mouse_genomes_project 2 24885873 24887954 - Surf1 protein_coding retained_intron MGP_129S1SvImJ_T0053438.1 MGP_129S1SvImJ_G0025500.1 mouse_genomes_project 2 24886117 24887135 - Surf1 protein_coding retained_intron MGP_129S1SvImJ_T0053439.1 MGP_129S1SvImJ_G0025500.1 mouse_genomes_project 2 24886500 24887975 - MGP_129S1SvImJ_P0053439 Surf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053440.1 MGP_129S1SvImJ_G0025500.1 mouse_genomes_project 2 24887099 24887988 - MGP_129S1SvImJ_P0053440 Surf1 protein_coding protein_coding MGP_129S1SvImJ_T0001085.1 MGP_129S1SvImJ_G0001014.1 mouse_genomes_project 2 32147626 32147905 + TEC TEC MGP_129S1SvImJ_T0010438.1 MGP_129S1SvImJ_G0008554.1 mouse_genomes_project 2 75039868 75039936 + Mir10b miRNA miRNA MGP_129S1SvImJ_T0010368.1 MGP_129S1SvImJ_G0008484.1 mouse_genomes_project 2 7865117 7865190 + Mir466 miRNA miRNA MGP_129S1SvImJ_T0013691.1 MGP_129S1SvImJ_G0011780.1 mouse_genomes_project 2 99987665 99987837 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056017.1 MGP_129S1SvImJ_G0026138.1 mouse_genomes_project 2 92336390 92346458 + MGP_129S1SvImJ_P0056017 Rapsn protein_coding protein_coding MGP_129S1SvImJ_T0056018.1 MGP_129S1SvImJ_G0026138.1 mouse_genomes_project 2 92336397 92346455 + MGP_129S1SvImJ_P0056018 Rapsn protein_coding protein_coding MGP_129S1SvImJ_T0056019.1 MGP_129S1SvImJ_G0026138.1 mouse_genomes_project 2 92336411 92346458 + MGP_129S1SvImJ_P0056019 Rapsn protein_coding protein_coding MGP_129S1SvImJ_T0056020.1 MGP_129S1SvImJ_G0026138.1 mouse_genomes_project 2 92343514 92346209 + Rapsn protein_coding retained_intron MGP_129S1SvImJ_T0057277.1 MGP_129S1SvImJ_G0026406.1 mouse_genomes_project 2 125132726 125138114 + MGP_129S1SvImJ_P0057277 B2m protein_coding protein_coding MGP_129S1SvImJ_T0099690.1 MGP_129S1SvImJ_G0037757.1 mouse_genomes_project 2 119886528 119886692 + Gm25189 snRNA snRNA MGP_129S1SvImJ_T0007443.1 MGP_129S1SvImJ_G0006109.1 mouse_genomes_project 2 187395862 187413233 + Gm14344 lincRNA lincRNA MGP_129S1SvImJ_T0057616.1 MGP_129S1SvImJ_G0026491.1 mouse_genomes_project 2 133094084 133107367 - MGP_129S1SvImJ_P0057616 Pdyn protein_coding protein_coding MGP_129S1SvImJ_T0057617.1 MGP_129S1SvImJ_G0026491.1 mouse_genomes_project 2 133096015 133106192 - MGP_129S1SvImJ_P0057617 Pdyn protein_coding protein_coding MGP_129S1SvImJ_T0057618.1 MGP_129S1SvImJ_G0026491.1 mouse_genomes_project 2 133105519 133107378 - Pdyn protein_coding retained_intron MGP_129S1SvImJ_T0054483.1 MGP_129S1SvImJ_G0025668.1 mouse_genomes_project 2 35213632 35214571 + MGP_129S1SvImJ_P0054483 Olfr342 protein_coding protein_coding MGP_129S1SvImJ_T0059712.1 MGP_129S1SvImJ_G0026992.1 mouse_genomes_project 2 186793486 186805718 - MGP_129S1SvImJ_P0059712 Rbbp8nl protein_coding protein_coding MGP_129S1SvImJ_T0102432.1 MGP_129S1SvImJ_G0040266.1 mouse_genomes_project 2 91323135 91324059 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0056663.1 MGP_129S1SvImJ_G0026278.1 mouse_genomes_project 2 114453373 114454312 - MGP_129S1SvImJ_P0056663 protein_coding protein_coding MGP_129S1SvImJ_T0013475.1 MGP_129S1SvImJ_G0011564.1 mouse_genomes_project 2 22305068 22306012 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013774.1 MGP_129S1SvImJ_G0011863.1 mouse_genomes_project 2 134481061 134482283 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059233.1 MGP_129S1SvImJ_G0026883.1 mouse_genomes_project 2 170459605 170470530 + MGP_129S1SvImJ_P0059233 Mmp9 protein_coding protein_coding MGP_129S1SvImJ_T0059234.1 MGP_129S1SvImJ_G0026883.1 mouse_genomes_project 2 170469854 170477486 + MGP_129S1SvImJ_P0059234 Mmp9 protein_coding protein_coding MGP_129S1SvImJ_T0059235.1 MGP_129S1SvImJ_G0026883.1 mouse_genomes_project 2 170472331 170472898 + Mmp9 protein_coding retained_intron MGP_129S1SvImJ_T0059236.1 MGP_129S1SvImJ_G0026883.1 mouse_genomes_project 2 170476021 170477486 + Mmp9 protein_coding processed_transcript MGP_129S1SvImJ_T0057496.1 MGP_129S1SvImJ_G0026460.1 mouse_genomes_project 2 130729047 130737371 - MGP_129S1SvImJ_P0057496 Fahd2a protein_coding protein_coding MGP_129S1SvImJ_T0057497.1 MGP_129S1SvImJ_G0026460.1 mouse_genomes_project 2 130729048 130737386 - Fahd2a protein_coding retained_intron MGP_129S1SvImJ_T0057498.1 MGP_129S1SvImJ_G0026460.1 mouse_genomes_project 2 130729103 130731152 - Fahd2a protein_coding processed_transcript MGP_129S1SvImJ_T0057499.1 MGP_129S1SvImJ_G0026460.1 mouse_genomes_project 2 130729669 130737378 - Fahd2a protein_coding processed_transcript MGP_129S1SvImJ_T0057500.1 MGP_129S1SvImJ_G0026460.1 mouse_genomes_project 2 130730954 130737301 - Fahd2a protein_coding processed_transcript MGP_129S1SvImJ_T0057501.1 MGP_129S1SvImJ_G0026460.1 mouse_genomes_project 2 130731243 130737337 - Fahd2a protein_coding retained_intron MGP_129S1SvImJ_T0057502.1 MGP_129S1SvImJ_G0026460.1 mouse_genomes_project 2 130733263 130737329 - Fahd2a protein_coding processed_transcript MGP_129S1SvImJ_T0059703.1 MGP_129S1SvImJ_G0026990.1 mouse_genomes_project 2 186769659 186773555 + MGP_129S1SvImJ_P0059703 Rps21 protein_coding protein_coding MGP_129S1SvImJ_T0059704.1 MGP_129S1SvImJ_G0026990.1 mouse_genomes_project 2 186769661 186773552 + Rps21 protein_coding retained_intron MGP_129S1SvImJ_T0059705.1 MGP_129S1SvImJ_G0026990.1 mouse_genomes_project 2 186769700 186770277 + Rps21 protein_coding retained_intron MGP_129S1SvImJ_T0059706.1 MGP_129S1SvImJ_G0026990.1 mouse_genomes_project 2 186769700 186770426 + Rps21 protein_coding retained_intron MGP_129S1SvImJ_T0013752.1 MGP_129S1SvImJ_G0011841.1 mouse_genomes_project 2 123927423 123928190 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058059.1 MGP_129S1SvImJ_G0026590.1 mouse_genomes_project 2 148703287 148704600 + MGP_129S1SvImJ_P0058059 Gm561 protein_coding protein_coding MGP_129S1SvImJ_T0013605.1 MGP_129S1SvImJ_G0011694.1 mouse_genomes_project 2 72763690 72764032 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017881.1 MGP_129S1SvImJ_G0015462.1 mouse_genomes_project 2 123717360 123733066 + AV039307 processed_transcript processed_transcript MGP_129S1SvImJ_T0017882.1 MGP_129S1SvImJ_G0015462.1 mouse_genomes_project 2 123717372 123733200 + AV039307 processed_transcript processed_transcript MGP_129S1SvImJ_T0017883.1 MGP_129S1SvImJ_G0015462.1 mouse_genomes_project 2 123732743 123733067 + AV039307 processed_transcript processed_transcript MGP_129S1SvImJ_T0004159.1 MGP_129S1SvImJ_G0003679.1 mouse_genomes_project 2 162560195 162561399 - Gm14286 antisense antisense MGP_129S1SvImJ_T0013557.1 MGP_129S1SvImJ_G0011646.1 mouse_genomes_project 2 55411282 55417422 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057683.1 MGP_129S1SvImJ_G0026506.1 mouse_genomes_project 2 133909867 134017027 + MGP_129S1SvImJ_P0057683 Ptpra protein_coding protein_coding MGP_129S1SvImJ_T0057684.1 MGP_129S1SvImJ_G0026506.1 mouse_genomes_project 2 133910133 134017024 + MGP_129S1SvImJ_P0057684 Ptpra protein_coding protein_coding MGP_129S1SvImJ_T0057685.1 MGP_129S1SvImJ_G0026506.1 mouse_genomes_project 2 133964708 134016469 + MGP_129S1SvImJ_P0057685 Ptpra protein_coding unknown_likely_coding MGP_129S1SvImJ_T0007198.1 MGP_129S1SvImJ_G0005904.1 mouse_genomes_project 2 44803576 44805382 + 1700019E08Rik lincRNA lincRNA MGP_129S1SvImJ_T0007199.1 MGP_129S1SvImJ_G0005904.1 mouse_genomes_project 2 44803771 44805001 + 1700019E08Rik lincRNA lincRNA MGP_129S1SvImJ_T0052656.1 MGP_129S1SvImJ_G0025358.1 mouse_genomes_project 2 11160160 11311526 - MGP_129S1SvImJ_P0052656 St8sia6 protein_coding protein_coding MGP_129S1SvImJ_T0052657.1 MGP_129S1SvImJ_G0025358.1 mouse_genomes_project 2 11166293 11310755 - St8sia6 protein_coding processed_transcript MGP_129S1SvImJ_T0054513.1 MGP_129S1SvImJ_G0025693.1 mouse_genomes_project 2 36054464 36113603 - MGP_129S1SvImJ_P0054513 Rc3h2 protein_coding protein_coding MGP_129S1SvImJ_T0054514.1 MGP_129S1SvImJ_G0025693.1 mouse_genomes_project 2 36057535 36113442 - MGP_129S1SvImJ_P0054514 Rc3h2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054515.1 MGP_129S1SvImJ_G0025693.1 mouse_genomes_project 2 36061275 36061987 - Rc3h2 protein_coding retained_intron MGP_129S1SvImJ_T0054516.1 MGP_129S1SvImJ_G0025693.1 mouse_genomes_project 2 36062203 36065658 - Rc3h2 protein_coding retained_intron MGP_129S1SvImJ_T0054517.1 MGP_129S1SvImJ_G0025693.1 mouse_genomes_project 2 36075483 36077719 - Rc3h2 protein_coding retained_intron MGP_129S1SvImJ_T0054518.1 MGP_129S1SvImJ_G0025693.1 mouse_genomes_project 2 36083964 36087544 - Rc3h2 protein_coding retained_intron MGP_129S1SvImJ_T0054519.1 MGP_129S1SvImJ_G0025693.1 mouse_genomes_project 2 36098221 36103389 - Rc3h2 protein_coding processed_transcript MGP_129S1SvImJ_T0054520.1 MGP_129S1SvImJ_G0025693.1 mouse_genomes_project 2 36102185 36105664 - Rc3h2 protein_coding retained_intron MGP_129S1SvImJ_T0053755.1 MGP_129S1SvImJ_G0025555.1 mouse_genomes_project 2 28342005 28361405 + MGP_129S1SvImJ_P0053755 Tbc1d13 protein_coding protein_coding MGP_129S1SvImJ_T0053756.1 MGP_129S1SvImJ_G0025555.1 mouse_genomes_project 2 28342005 28345554 + MGP_129S1SvImJ_P0053756 Tbc1d13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053757.1 MGP_129S1SvImJ_G0025555.1 mouse_genomes_project 2 28342031 28343410 + Tbc1d13 protein_coding retained_intron MGP_129S1SvImJ_T0053758.1 MGP_129S1SvImJ_G0025555.1 mouse_genomes_project 2 28342050 28345437 + Tbc1d13 protein_coding processed_transcript MGP_129S1SvImJ_T0053759.1 MGP_129S1SvImJ_G0025555.1 mouse_genomes_project 2 28342065 28344934 + MGP_129S1SvImJ_P0053759 Tbc1d13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053760.1 MGP_129S1SvImJ_G0025555.1 mouse_genomes_project 2 28342080 28345771 + Tbc1d13 protein_coding processed_transcript MGP_129S1SvImJ_T0053761.1 MGP_129S1SvImJ_G0025555.1 mouse_genomes_project 2 28345287 28350600 + Tbc1d13 protein_coding processed_transcript MGP_129S1SvImJ_T0053762.1 MGP_129S1SvImJ_G0025555.1 mouse_genomes_project 2 28350354 28356452 + Tbc1d13 protein_coding retained_intron MGP_129S1SvImJ_T0055549.1 MGP_129S1SvImJ_G0025882.1 mouse_genomes_project 2 80863715 80866600 + MGP_129S1SvImJ_P0055549 Prdx6b protein_coding protein_coding MGP_129S1SvImJ_T0001050.1 MGP_129S1SvImJ_G0000979.1 mouse_genomes_project 2 8573323 8575995 - TEC TEC MGP_129S1SvImJ_T0053054.1 MGP_129S1SvImJ_G0025430.1 mouse_genomes_project 2 23110052 23111195 + MGP_129S1SvImJ_P0053054 Rnf208 protein_coding protein_coding MGP_129S1SvImJ_T0053055.1 MGP_129S1SvImJ_G0025430.1 mouse_genomes_project 2 23110121 23112059 + MGP_129S1SvImJ_P0053055 Rnf208 protein_coding protein_coding MGP_129S1SvImJ_T0053056.1 MGP_129S1SvImJ_G0025430.1 mouse_genomes_project 2 23110735 23112060 + MGP_129S1SvImJ_P0053056 Rnf208 protein_coding protein_coding MGP_129S1SvImJ_T0013573.1 MGP_129S1SvImJ_G0011662.1 mouse_genomes_project 2 59708224 59709219 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013435.1 MGP_129S1SvImJ_G0011524.1 mouse_genomes_project 2 8328195 8329033 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004162.1 MGP_129S1SvImJ_G0003682.1 mouse_genomes_project 2 163694886 163695797 - Gm14205 antisense antisense MGP_129S1SvImJ_T0013574.1 MGP_129S1SvImJ_G0011663.1 mouse_genomes_project 2 59858743 59860289 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055065.1 MGP_129S1SvImJ_G0025784.1 mouse_genomes_project 2 66125443 66169891 - MGP_129S1SvImJ_P0055065 Scn1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055066.1 MGP_129S1SvImJ_G0025784.1 mouse_genomes_project 2 66125446 66263837 - MGP_129S1SvImJ_P0055066 Scn1a protein_coding protein_coding MGP_129S1SvImJ_T0055067.1 MGP_129S1SvImJ_G0025784.1 mouse_genomes_project 2 66125447 66288733 - MGP_129S1SvImJ_P0055067 Scn1a protein_coding protein_coding MGP_129S1SvImJ_T0055068.1 MGP_129S1SvImJ_G0025784.1 mouse_genomes_project 2 66125449 66207118 - MGP_129S1SvImJ_P0055068 Scn1a protein_coding protein_coding MGP_129S1SvImJ_T0055069.1 MGP_129S1SvImJ_G0025784.1 mouse_genomes_project 2 66127550 66207100 - MGP_129S1SvImJ_P0055069 Scn1a protein_coding protein_coding MGP_129S1SvImJ_T0055070.1 MGP_129S1SvImJ_G0025784.1 mouse_genomes_project 2 66127557 66170084 - MGP_129S1SvImJ_P0055070 Scn1a protein_coding protein_coding MGP_129S1SvImJ_T0055071.1 MGP_129S1SvImJ_G0025784.1 mouse_genomes_project 2 66179363 66288736 - MGP_129S1SvImJ_P0055071 Scn1a protein_coding protein_coding MGP_129S1SvImJ_T0055072.1 MGP_129S1SvImJ_G0025784.1 mouse_genomes_project 2 66204294 66288710 - Scn1a protein_coding retained_intron MGP_129S1SvImJ_T0102421.1 MGP_129S1SvImJ_G0040255.1 mouse_genomes_project 2 88912718 88913163 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0010360.1 MGP_129S1SvImJ_G0008476.1 mouse_genomes_project 2 7831008 7831094 + Mir669d-2 miRNA miRNA MGP_129S1SvImJ_T0056775.1 MGP_129S1SvImJ_G0026312.1 mouse_genomes_project 2 120882075 120935677 - MGP_129S1SvImJ_P0056775 Fsip1 protein_coding protein_coding MGP_129S1SvImJ_T0056776.1 MGP_129S1SvImJ_G0026312.1 mouse_genomes_project 2 120923157 120935667 - MGP_129S1SvImJ_P0056776 Fsip1 protein_coding protein_coding MGP_129S1SvImJ_T0099670.1 MGP_129S1SvImJ_G0037737.1 mouse_genomes_project 2 37822921 37823028 + Gm26127 snRNA snRNA MGP_129S1SvImJ_T0056627.1 MGP_129S1SvImJ_G0026247.1 mouse_genomes_project 2 113011004 113323537 - MGP_129S1SvImJ_P0056627 Ano3 protein_coding protein_coding MGP_129S1SvImJ_T0056628.1 MGP_129S1SvImJ_G0026247.1 mouse_genomes_project 2 113045457 113322987 - Ano3 protein_coding retained_intron MGP_129S1SvImJ_T0056629.1 MGP_129S1SvImJ_G0026247.1 mouse_genomes_project 2 113072265 113122781 - MGP_129S1SvImJ_P0056629 Ano3 protein_coding protein_coding MGP_129S1SvImJ_T0053991.1 MGP_129S1SvImJ_G0025589.1 mouse_genomes_project 2 30047192 30058268 + Abl1 protein_coding retained_intron MGP_129S1SvImJ_T0053992.1 MGP_129S1SvImJ_G0025589.1 mouse_genomes_project 2 30047353 30072142 + Abl1 protein_coding processed_transcript MGP_129S1SvImJ_T0053993.1 MGP_129S1SvImJ_G0025589.1 mouse_genomes_project 2 30047367 30182315 + MGP_129S1SvImJ_P0053993 Abl1 protein_coding protein_coding MGP_129S1SvImJ_T0053994.1 MGP_129S1SvImJ_G0025589.1 mouse_genomes_project 2 30047368 30179113 + MGP_129S1SvImJ_P0053994 Abl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053995.1 MGP_129S1SvImJ_G0025589.1 mouse_genomes_project 2 30048281 30154520 + MGP_129S1SvImJ_P0053995 Abl1 protein_coding protein_coding MGP_129S1SvImJ_T0053996.1 MGP_129S1SvImJ_G0025589.1 mouse_genomes_project 2 30048427 30155152 + MGP_129S1SvImJ_P0053996 Abl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053997.1 MGP_129S1SvImJ_G0025589.1 mouse_genomes_project 2 30136074 30183001 + MGP_129S1SvImJ_P0053997 Abl1 protein_coding protein_coding MGP_129S1SvImJ_T0053998.1 MGP_129S1SvImJ_G0025589.1 mouse_genomes_project 2 30136304 30155152 + MGP_129S1SvImJ_P0053998 Abl1 protein_coding protein_coding MGP_129S1SvImJ_T0053999.1 MGP_129S1SvImJ_G0025589.1 mouse_genomes_project 2 30168868 30173266 + Abl1 protein_coding retained_intron MGP_129S1SvImJ_T0054000.1 MGP_129S1SvImJ_G0025589.1 mouse_genomes_project 2 30175419 30176766 + Abl1 protein_coding retained_intron MGP_129S1SvImJ_T0017798.1 MGP_129S1SvImJ_G0015414.1 mouse_genomes_project 2 34195873 34205038 - Gm13446 processed_transcript processed_transcript MGP_129S1SvImJ_T0017799.1 MGP_129S1SvImJ_G0015414.1 mouse_genomes_project 2 34201184 34204821 - Gm13446 processed_transcript processed_transcript MGP_129S1SvImJ_T0102433.1 MGP_129S1SvImJ_G0040267.1 mouse_genomes_project 2 91446933 91449036 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0057043.1 MGP_129S1SvImJ_G0026368.1 mouse_genomes_project 2 123376818 123430488 - MGP_129S1SvImJ_P0057043 Zfp106 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0057044.1 MGP_129S1SvImJ_G0026368.1 mouse_genomes_project 2 123378075 123408474 - MGP_129S1SvImJ_P0057044 Zfp106 protein_coding protein_coding MGP_129S1SvImJ_T0057045.1 MGP_129S1SvImJ_G0026368.1 mouse_genomes_project 2 123378792 123381880 - Zfp106 protein_coding retained_intron MGP_129S1SvImJ_T0057046.1 MGP_129S1SvImJ_G0026368.1 mouse_genomes_project 2 123387895 123389654 - Zfp106 protein_coding retained_intron MGP_129S1SvImJ_T0057047.1 MGP_129S1SvImJ_G0026368.1 mouse_genomes_project 2 123391820 123393747 - MGP_129S1SvImJ_P0057047 Zfp106 protein_coding protein_coding MGP_129S1SvImJ_T0057048.1 MGP_129S1SvImJ_G0026368.1 mouse_genomes_project 2 123395397 123430472 - Zfp106 protein_coding retained_intron MGP_129S1SvImJ_T0057049.1 MGP_129S1SvImJ_G0026368.1 mouse_genomes_project 2 123395860 123397660 - Zfp106 protein_coding retained_intron MGP_129S1SvImJ_T0057050.1 MGP_129S1SvImJ_G0026368.1 mouse_genomes_project 2 123397484 123401200 - MGP_129S1SvImJ_P0057050 Zfp106 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057051.1 MGP_129S1SvImJ_G0026368.1 mouse_genomes_project 2 123401027 123430501 - MGP_129S1SvImJ_P0057051 Zfp106 protein_coding protein_coding MGP_129S1SvImJ_T0057052.1 MGP_129S1SvImJ_G0026368.1 mouse_genomes_project 2 123404250 123420910 - MGP_129S1SvImJ_P0057052 Zfp106 protein_coding protein_coding MGP_129S1SvImJ_T0057053.1 MGP_129S1SvImJ_G0026368.1 mouse_genomes_project 2 123404383 123430492 - Zfp106 protein_coding processed_transcript MGP_129S1SvImJ_T0099705.1 MGP_129S1SvImJ_G0037772.1 mouse_genomes_project 2 144377690 144377797 - Gm23846 snRNA snRNA MGP_129S1SvImJ_T0054847.1 MGP_129S1SvImJ_G0025751.1 mouse_genomes_project 2 58112178 58185305 + Upp2 protein_coding processed_transcript MGP_129S1SvImJ_T0054848.1 MGP_129S1SvImJ_G0025751.1 mouse_genomes_project 2 58112198 58129276 + Upp2 protein_coding processed_transcript MGP_129S1SvImJ_T0054849.1 MGP_129S1SvImJ_G0025751.1 mouse_genomes_project 2 58112267 58353708 + MGP_129S1SvImJ_P0054849 Upp2 protein_coding protein_coding MGP_129S1SvImJ_T0054850.1 MGP_129S1SvImJ_G0025751.1 mouse_genomes_project 2 58314930 58351979 + MGP_129S1SvImJ_P0054850 Upp2 protein_coding protein_coding MGP_129S1SvImJ_T0054851.1 MGP_129S1SvImJ_G0025751.1 mouse_genomes_project 2 58315168 58351405 + MGP_129S1SvImJ_P0054851 Upp2 protein_coding protein_coding MGP_129S1SvImJ_T0054852.1 MGP_129S1SvImJ_G0025751.1 mouse_genomes_project 2 58326061 58351039 + Upp2 protein_coding processed_transcript MGP_129S1SvImJ_T0059058.1 MGP_129S1SvImJ_G0026824.1 mouse_genomes_project 2 168840742 168852249 + MGP_129S1SvImJ_P0059058 R3hdml protein_coding protein_coding MGP_129S1SvImJ_T0059397.1 MGP_129S1SvImJ_G0026910.1 mouse_genomes_project 2 172901470 172956576 - MGP_129S1SvImJ_P0059397 Ptgis protein_coding protein_coding MGP_129S1SvImJ_T0059398.1 MGP_129S1SvImJ_G0026910.1 mouse_genomes_project 2 172914521 172956591 - MGP_129S1SvImJ_P0059398 Ptgis protein_coding protein_coding MGP_129S1SvImJ_T0059399.1 MGP_129S1SvImJ_G0026910.1 mouse_genomes_project 2 172918136 172920031 - Ptgis protein_coding retained_intron MGP_129S1SvImJ_T0058104.1 MGP_129S1SvImJ_G0026599.1 mouse_genomes_project 2 150421214 150701578 - MGP_129S1SvImJ_P0058104 Ralgapa2 protein_coding protein_coding MGP_129S1SvImJ_T0058105.1 MGP_129S1SvImJ_G0026599.1 mouse_genomes_project 2 150425291 150635625 - MGP_129S1SvImJ_P0058105 Ralgapa2 protein_coding protein_coding MGP_129S1SvImJ_T0058106.1 MGP_129S1SvImJ_G0026599.1 mouse_genomes_project 2 150426099 150442702 - Ralgapa2 protein_coding processed_transcript MGP_129S1SvImJ_T0058107.1 MGP_129S1SvImJ_G0026599.1 mouse_genomes_project 2 150429514 150701473 - MGP_129S1SvImJ_P0058107 Ralgapa2 protein_coding protein_coding MGP_129S1SvImJ_T0058108.1 MGP_129S1SvImJ_G0026599.1 mouse_genomes_project 2 150439890 150573767 - MGP_129S1SvImJ_P0058108 Ralgapa2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058109.1 MGP_129S1SvImJ_G0026599.1 mouse_genomes_project 2 150501114 150701473 - MGP_129S1SvImJ_P0058109 Ralgapa2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0058110.1 MGP_129S1SvImJ_G0026599.1 mouse_genomes_project 2 150546772 150594620 - Ralgapa2 protein_coding retained_intron MGP_129S1SvImJ_T0058111.1 MGP_129S1SvImJ_G0026599.1 mouse_genomes_project 2 150593171 150601213 - Ralgapa2 protein_coding retained_intron MGP_129S1SvImJ_T0058112.1 MGP_129S1SvImJ_G0026599.1 mouse_genomes_project 2 150608414 150701485 - Ralgapa2 protein_coding retained_intron MGP_129S1SvImJ_T0058113.1 MGP_129S1SvImJ_G0026599.1 mouse_genomes_project 2 150617796 150701578 - Ralgapa2 protein_coding retained_intron MGP_129S1SvImJ_T0058114.1 MGP_129S1SvImJ_G0026599.1 mouse_genomes_project 2 150673900 150701600 - Ralgapa2 protein_coding retained_intron MGP_129S1SvImJ_T0055779.1 MGP_129S1SvImJ_G0025986.1 mouse_genomes_project 2 87896261 87898337 - MGP_129S1SvImJ_P0055779 Olfr1098 protein_coding protein_coding MGP_129S1SvImJ_T0056397.1 MGP_129S1SvImJ_G0026199.1 mouse_genomes_project 2 104741862 104846292 - MGP_129S1SvImJ_P0056397 Cd44 protein_coding protein_coding MGP_129S1SvImJ_T0056398.1 MGP_129S1SvImJ_G0026199.1 mouse_genomes_project 2 104741862 104846252 - MGP_129S1SvImJ_P0056398 Cd44 protein_coding protein_coding MGP_129S1SvImJ_T0056399.1 MGP_129S1SvImJ_G0026199.1 mouse_genomes_project 2 104743251 104846122 - MGP_129S1SvImJ_P0056399 Cd44 protein_coding protein_coding MGP_129S1SvImJ_T0056400.1 MGP_129S1SvImJ_G0026199.1 mouse_genomes_project 2 104743267 104846137 - MGP_129S1SvImJ_P0056400 Cd44 protein_coding protein_coding MGP_129S1SvImJ_T0056401.1 MGP_129S1SvImJ_G0026199.1 mouse_genomes_project 2 104744840 104845996 - MGP_129S1SvImJ_P0056401 Cd44 protein_coding protein_coding MGP_129S1SvImJ_T0056402.1 MGP_129S1SvImJ_G0026199.1 mouse_genomes_project 2 104744840 104845977 - MGP_129S1SvImJ_P0056402 Cd44 protein_coding protein_coding MGP_129S1SvImJ_T0056403.1 MGP_129S1SvImJ_G0026199.1 mouse_genomes_project 2 104744850 104845977 - MGP_129S1SvImJ_P0056403 Cd44 protein_coding protein_coding MGP_129S1SvImJ_T0056404.1 MGP_129S1SvImJ_G0026199.1 mouse_genomes_project 2 104744853 104845973 - MGP_129S1SvImJ_P0056404 Cd44 protein_coding protein_coding MGP_129S1SvImJ_T0056405.1 MGP_129S1SvImJ_G0026199.1 mouse_genomes_project 2 104784878 104846085 - Cd44 protein_coding retained_intron MGP_129S1SvImJ_T0059714.1 MGP_129S1SvImJ_G0026994.1 mouse_genomes_project 2 186974654 186993986 + MGP_129S1SvImJ_P0059714 Slco4a1 protein_coding protein_coding MGP_129S1SvImJ_T0059715.1 MGP_129S1SvImJ_G0026994.1 mouse_genomes_project 2 186974743 186993964 + Slco4a1 protein_coding processed_transcript MGP_129S1SvImJ_T0059716.1 MGP_129S1SvImJ_G0026994.1 mouse_genomes_project 2 186979403 186993986 + MGP_129S1SvImJ_P0059716 Slco4a1 protein_coding protein_coding MGP_129S1SvImJ_T0059717.1 MGP_129S1SvImJ_G0026994.1 mouse_genomes_project 2 186985509 186986832 + Slco4a1 protein_coding retained_intron MGP_129S1SvImJ_T0059718.1 MGP_129S1SvImJ_G0026994.1 mouse_genomes_project 2 186990888 186993971 + Slco4a1 protein_coding retained_intron MGP_129S1SvImJ_T0007237.1 MGP_129S1SvImJ_G0005937.1 mouse_genomes_project 2 74408353 74410824 - lincRNA lincRNA MGP_129S1SvImJ_T0003962.1 MGP_129S1SvImJ_G0003537.1 mouse_genomes_project 2 29081460 29085096 + 4930527E20Rik antisense antisense MGP_129S1SvImJ_T0013571.1 MGP_129S1SvImJ_G0011660.1 mouse_genomes_project 2 59558481 59558875 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055342.1 MGP_129S1SvImJ_G0025840.1 mouse_genomes_project 2 73900613 73945689 - MGP_129S1SvImJ_P0055342 Chn1 protein_coding protein_coding MGP_129S1SvImJ_T0055343.1 MGP_129S1SvImJ_G0025840.1 mouse_genomes_project 2 73900621 74063128 - MGP_129S1SvImJ_P0055343 Chn1 protein_coding protein_coding MGP_129S1SvImJ_T0055344.1 MGP_129S1SvImJ_G0025840.1 mouse_genomes_project 2 73900621 74063128 - MGP_129S1SvImJ_P0055344 Chn1 protein_coding protein_coding MGP_129S1SvImJ_T0055345.1 MGP_129S1SvImJ_G0025840.1 mouse_genomes_project 2 73903045 74006000 - MGP_129S1SvImJ_P0055345 Chn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055346.1 MGP_129S1SvImJ_G0025840.1 mouse_genomes_project 2 73914527 73940816 - MGP_129S1SvImJ_P0055346 Chn1 protein_coding protein_coding MGP_129S1SvImJ_T0055347.1 MGP_129S1SvImJ_G0025840.1 mouse_genomes_project 2 73915245 74063108 - MGP_129S1SvImJ_P0055347 Chn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055348.1 MGP_129S1SvImJ_G0025840.1 mouse_genomes_project 2 73964300 74062823 - MGP_129S1SvImJ_P0055348 Chn1 protein_coding protein_coding MGP_129S1SvImJ_T0007170.1 MGP_129S1SvImJ_G0005883.1 mouse_genomes_project 2 24138441 24143391 - Gm13553 lincRNA lincRNA MGP_129S1SvImJ_T0056501.1 MGP_129S1SvImJ_G0026219.1 mouse_genomes_project 2 106779179 106802423 - Tcp11l1 protein_coding processed_transcript MGP_129S1SvImJ_T0056504.1 MGP_129S1SvImJ_G0026219.1 mouse_genomes_project 2 106796123 106827150 - MGP_129S1SvImJ_P0056504 Tcp11l1 protein_coding protein_coding MGP_129S1SvImJ_T0056505.1 MGP_129S1SvImJ_G0026219.1 mouse_genomes_project 2 106798085 106827156 - MGP_129S1SvImJ_P0056505 Tcp11l1 protein_coding protein_coding MGP_129S1SvImJ_T0056506.1 MGP_129S1SvImJ_G0026219.1 mouse_genomes_project 2 106802935 106827163 - Tcp11l1 protein_coding retained_intron MGP_129S1SvImJ_T0056507.1 MGP_129S1SvImJ_G0026219.1 mouse_genomes_project 2 106812576 106821451 - Tcp11l1 protein_coding processed_transcript MGP_129S1SvImJ_T0056508.1 MGP_129S1SvImJ_G0026219.1 mouse_genomes_project 2 106814120 106827087 - Tcp11l1 protein_coding processed_transcript MGP_129S1SvImJ_T0056509.1 MGP_129S1SvImJ_G0026219.1 mouse_genomes_project 2 106819933 106827160 - Tcp11l1 protein_coding processed_transcript MGP_129S1SvImJ_T0054149.1 MGP_129S1SvImJ_G0025612.1 mouse_genomes_project 2 31049240 31050251 + Pip5kl1 protein_coding processed_transcript MGP_129S1SvImJ_T0054150.1 MGP_129S1SvImJ_G0025612.1 mouse_genomes_project 2 31050161 31059812 + MGP_129S1SvImJ_P0054150 Pip5kl1 protein_coding protein_coding MGP_129S1SvImJ_T0054151.1 MGP_129S1SvImJ_G0025612.1 mouse_genomes_project 2 31050286 31059801 + MGP_129S1SvImJ_P0054151 Pip5kl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054152.1 MGP_129S1SvImJ_G0025612.1 mouse_genomes_project 2 31055956 31059802 + Pip5kl1 protein_coding retained_intron MGP_129S1SvImJ_T0056642.1 MGP_129S1SvImJ_G0026257.1 mouse_genomes_project 2 113719394 113720312 + MGP_129S1SvImJ_P0056642 protein_coding protein_coding MGP_129S1SvImJ_T0013761.1 MGP_129S1SvImJ_G0011850.1 mouse_genomes_project 2 130104054 130104880 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059261.1 MGP_129S1SvImJ_G0026887.1 mouse_genomes_project 2 170606912 170621291 - MGP_129S1SvImJ_P0059261 1700025C18Rik protein_coding protein_coding MGP_129S1SvImJ_T0004143.1 MGP_129S1SvImJ_G0003664.1 mouse_genomes_project 2 156371921 156373563 - Rspo4os antisense antisense MGP_129S1SvImJ_T0101679.1 MGP_129S1SvImJ_G0039699.1 mouse_genomes_project 2 165132773 165133221 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0004096.1 MGP_129S1SvImJ_G0003633.1 mouse_genomes_project 2 132533120 132555179 - AI847159 antisense antisense MGP_129S1SvImJ_T0004097.1 MGP_129S1SvImJ_G0003633.1 mouse_genomes_project 2 132552692 132555179 - AI847159 antisense antisense MGP_129S1SvImJ_T0004098.1 MGP_129S1SvImJ_G0003633.1 mouse_genomes_project 2 132552696 132553086 - AI847159 antisense antisense MGP_129S1SvImJ_T0004099.1 MGP_129S1SvImJ_G0003633.1 mouse_genomes_project 2 132552740 132555214 - AI847159 antisense antisense MGP_129S1SvImJ_T0059191.1 MGP_129S1SvImJ_G0026874.1 mouse_genomes_project 2 170293868 170297574 - Acot8 protein_coding retained_intron MGP_129S1SvImJ_T0059192.1 MGP_129S1SvImJ_G0026874.1 mouse_genomes_project 2 170293868 170307373 - MGP_129S1SvImJ_P0059192 Acot8 protein_coding protein_coding MGP_129S1SvImJ_T0059193.1 MGP_129S1SvImJ_G0026874.1 mouse_genomes_project 2 170293868 170307373 - MGP_129S1SvImJ_P0059193 Acot8 protein_coding protein_coding MGP_129S1SvImJ_T0059194.1 MGP_129S1SvImJ_G0026874.1 mouse_genomes_project 2 170296892 170307372 - MGP_129S1SvImJ_P0059194 Acot8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059195.1 MGP_129S1SvImJ_G0026874.1 mouse_genomes_project 2 170302061 170307313 - Acot8 protein_coding retained_intron MGP_129S1SvImJ_T0010401.1 MGP_129S1SvImJ_G0008517.1 mouse_genomes_project 2 24552392 24552465 + Mir126a miRNA miRNA MGP_129S1SvImJ_T0059977.1 MGP_129S1SvImJ_G0027038.1 mouse_genomes_project 2 188465469 188485638 + MGP_129S1SvImJ_P0059977 Pcmtd2 protein_coding protein_coding MGP_129S1SvImJ_T0059978.1 MGP_129S1SvImJ_G0027038.1 mouse_genomes_project 2 188465528 188485623 + MGP_129S1SvImJ_P0059978 Pcmtd2 protein_coding protein_coding MGP_129S1SvImJ_T0059979.1 MGP_129S1SvImJ_G0027038.1 mouse_genomes_project 2 188468505 188474278 + MGP_129S1SvImJ_P0059979 Pcmtd2 protein_coding protein_coding MGP_129S1SvImJ_T0059980.1 MGP_129S1SvImJ_G0027038.1 mouse_genomes_project 2 188470126 188474332 + Pcmtd2 protein_coding retained_intron MGP_129S1SvImJ_T0059981.1 MGP_129S1SvImJ_G0027038.1 mouse_genomes_project 2 188472120 188483515 + MGP_129S1SvImJ_P0059981 Pcmtd2 protein_coding protein_coding MGP_129S1SvImJ_T0059982.1 MGP_129S1SvImJ_G0027038.1 mouse_genomes_project 2 188479132 188483779 + Pcmtd2 protein_coding processed_transcript MGP_129S1SvImJ_T0059983.1 MGP_129S1SvImJ_G0027038.1 mouse_genomes_project 2 188479140 188483654 + Pcmtd2 protein_coding processed_transcript MGP_129S1SvImJ_T0059984.1 MGP_129S1SvImJ_G0027038.1 mouse_genomes_project 2 188479174 188483432 + Pcmtd2 protein_coding processed_transcript MGP_129S1SvImJ_T0059985.1 MGP_129S1SvImJ_G0027038.1 mouse_genomes_project 2 188479737 188483682 + Pcmtd2 protein_coding retained_intron MGP_129S1SvImJ_T0057546.1 MGP_129S1SvImJ_G0026472.1 mouse_genomes_project 2 131798924 131800178 + MGP_129S1SvImJ_P0057546 protein_coding protein_coding MGP_129S1SvImJ_T0102423.1 MGP_129S1SvImJ_G0040257.1 mouse_genomes_project 2 89054782 89055674 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0100916.1 MGP_129S1SvImJ_G0038983.1 mouse_genomes_project 2 17695287 17695378 + Gm25859 snoRNA snoRNA MGP_129S1SvImJ_T0003916.1 MGP_129S1SvImJ_G0003502.1 mouse_genomes_project 2 7214090 7215675 + Gm13256 antisense antisense MGP_129S1SvImJ_T0057847.1 MGP_129S1SvImJ_G0026541.1 mouse_genomes_project 2 135837102 135872427 + MGP_129S1SvImJ_P0057847 Cds2 protein_coding protein_coding MGP_129S1SvImJ_T0057848.1 MGP_129S1SvImJ_G0026541.1 mouse_genomes_project 2 135837102 135888133 + MGP_129S1SvImJ_P0057848 Cds2 protein_coding protein_coding MGP_129S1SvImJ_T0057849.1 MGP_129S1SvImJ_G0026541.1 mouse_genomes_project 2 135837201 135873527 + MGP_129S1SvImJ_P0057849 Cds2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057850.1 MGP_129S1SvImJ_G0026541.1 mouse_genomes_project 2 135859577 135871855 + MGP_129S1SvImJ_P0057850 Cds2 protein_coding protein_coding MGP_129S1SvImJ_T0057851.1 MGP_129S1SvImJ_G0026541.1 mouse_genomes_project 2 135860340 135888133 + MGP_129S1SvImJ_P0057851 Cds2 protein_coding protein_coding MGP_129S1SvImJ_T0057852.1 MGP_129S1SvImJ_G0026541.1 mouse_genomes_project 2 135877547 135881551 + MGP_129S1SvImJ_P0057852 Cds2 protein_coding protein_coding MGP_129S1SvImJ_T0055881.1 MGP_129S1SvImJ_G0026075.1 mouse_genomes_project 2 90148693 90156010 - MGP_129S1SvImJ_P0055881 Olfr1213 protein_coding protein_coding MGP_129S1SvImJ_T0055882.1 MGP_129S1SvImJ_G0026075.1 mouse_genomes_project 2 90149192 90155980 - Olfr1213 protein_coding processed_transcript MGP_129S1SvImJ_T0055883.1 MGP_129S1SvImJ_G0026075.1 mouse_genomes_project 2 90149409 90156004 - Olfr1213 protein_coding processed_transcript MGP_129S1SvImJ_T0013462.1 MGP_129S1SvImJ_G0011551.1 mouse_genomes_project 2 17405542 17405647 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011518.1 MGP_129S1SvImJ_G0009634.1 mouse_genomes_project 2 44192294 44192371 + Gm27645 misc_RNA misc_RNA MGP_129S1SvImJ_T0004144.1 MGP_129S1SvImJ_G0003665.1 mouse_genomes_project 2 156458604 156462303 - Gm14154 antisense antisense MGP_129S1SvImJ_T0004101.1 MGP_129S1SvImJ_G0003635.1 mouse_genomes_project 2 132625287 132646937 + Gm14024 antisense antisense MGP_129S1SvImJ_T0057430.1 MGP_129S1SvImJ_G0026445.1 mouse_genomes_project 2 130030575 130115795 - MGP_129S1SvImJ_P0057430 Trpm7 protein_coding protein_coding MGP_129S1SvImJ_T0057431.1 MGP_129S1SvImJ_G0026445.1 mouse_genomes_project 2 130030581 130115682 - MGP_129S1SvImJ_P0057431 Trpm7 protein_coding protein_coding MGP_129S1SvImJ_T0057432.1 MGP_129S1SvImJ_G0026445.1 mouse_genomes_project 2 130030594 130034547 - Trpm7 protein_coding retained_intron MGP_129S1SvImJ_T0057433.1 MGP_129S1SvImJ_G0026445.1 mouse_genomes_project 2 130031837 130041636 - Trpm7 protein_coding retained_intron MGP_129S1SvImJ_T0057434.1 MGP_129S1SvImJ_G0026445.1 mouse_genomes_project 2 130031908 130036857 - MGP_129S1SvImJ_P0057434 Trpm7 protein_coding protein_coding MGP_129S1SvImJ_T0057435.1 MGP_129S1SvImJ_G0026445.1 mouse_genomes_project 2 130036004 130036840 - Trpm7 protein_coding retained_intron MGP_129S1SvImJ_T0057436.1 MGP_129S1SvImJ_G0026445.1 mouse_genomes_project 2 130036293 130044072 - Trpm7 protein_coding processed_transcript MGP_129S1SvImJ_T0057437.1 MGP_129S1SvImJ_G0026445.1 mouse_genomes_project 2 130052046 130056818 - Trpm7 protein_coding retained_intron MGP_129S1SvImJ_T0057438.1 MGP_129S1SvImJ_G0026445.1 mouse_genomes_project 2 130069078 130073665 - Trpm7 protein_coding retained_intron MGP_129S1SvImJ_T0057439.1 MGP_129S1SvImJ_G0026445.1 mouse_genomes_project 2 130070651 130115751 - Trpm7 protein_coding retained_intron MGP_129S1SvImJ_T0057440.1 MGP_129S1SvImJ_G0026445.1 mouse_genomes_project 2 130070654 130074004 - Trpm7 protein_coding retained_intron MGP_129S1SvImJ_T0058335.1 MGP_129S1SvImJ_G0026678.1 mouse_genomes_project 2 157360379 157415302 - MGP_129S1SvImJ_P0058335 Bcl2l1 protein_coding protein_coding MGP_129S1SvImJ_T0058336.1 MGP_129S1SvImJ_G0026678.1 mouse_genomes_project 2 157360383 157414240 - MGP_129S1SvImJ_P0058336 Bcl2l1 protein_coding protein_coding MGP_129S1SvImJ_T0058337.1 MGP_129S1SvImJ_G0026678.1 mouse_genomes_project 2 157361122 157412109 - Bcl2l1 protein_coding processed_transcript MGP_129S1SvImJ_T0058338.1 MGP_129S1SvImJ_G0026678.1 mouse_genomes_project 2 157411700 157414215 - MGP_129S1SvImJ_P0058338 Bcl2l1 protein_coding protein_coding MGP_129S1SvImJ_T0058339.1 MGP_129S1SvImJ_G0026678.1 mouse_genomes_project 2 157411935 157413884 - MGP_129S1SvImJ_P0058339 Bcl2l1 protein_coding protein_coding MGP_129S1SvImJ_T0058340.1 MGP_129S1SvImJ_G0026678.1 mouse_genomes_project 2 157413000 157414686 - MGP_129S1SvImJ_P0058340 Bcl2l1 protein_coding protein_coding MGP_129S1SvImJ_T0058341.1 MGP_129S1SvImJ_G0026678.1 mouse_genomes_project 2 157413102 157414226 - MGP_129S1SvImJ_P0058341 Bcl2l1 protein_coding protein_coding MGP_129S1SvImJ_T0058342.1 MGP_129S1SvImJ_G0026678.1 mouse_genomes_project 2 157413274 157414192 - MGP_129S1SvImJ_P0058342 Bcl2l1 protein_coding protein_coding MGP_129S1SvImJ_T0058343.1 MGP_129S1SvImJ_G0026678.1 mouse_genomes_project 2 157413330 157415284 - MGP_129S1SvImJ_P0058343 Bcl2l1 protein_coding protein_coding MGP_129S1SvImJ_T0013883.1 MGP_129S1SvImJ_G0011972.1 mouse_genomes_project 2 173274800 173275077 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059312.1 MGP_129S1SvImJ_G0026898.1 mouse_genomes_project 2 171363217 171448798 - MGP_129S1SvImJ_P0059312 Zmynd8 protein_coding protein_coding MGP_129S1SvImJ_T0059313.1 MGP_129S1SvImJ_G0026898.1 mouse_genomes_project 2 171363217 171480158 - MGP_129S1SvImJ_P0059313 Zmynd8 protein_coding protein_coding MGP_129S1SvImJ_T0059314.1 MGP_129S1SvImJ_G0026898.1 mouse_genomes_project 2 171363220 171477696 - MGP_129S1SvImJ_P0059314 Zmynd8 protein_coding protein_coding MGP_129S1SvImJ_T0059315.1 MGP_129S1SvImJ_G0026898.1 mouse_genomes_project 2 171363220 171477696 - MGP_129S1SvImJ_P0059315 Zmynd8 protein_coding protein_coding MGP_129S1SvImJ_T0059316.1 MGP_129S1SvImJ_G0026898.1 mouse_genomes_project 2 171364346 171480179 - MGP_129S1SvImJ_P0059316 Zmynd8 protein_coding protein_coding MGP_129S1SvImJ_T0059317.1 MGP_129S1SvImJ_G0026898.1 mouse_genomes_project 2 171364373 171480055 - Zmynd8 protein_coding processed_transcript MGP_129S1SvImJ_T0059318.1 MGP_129S1SvImJ_G0026898.1 mouse_genomes_project 2 171364373 171472165 - MGP_129S1SvImJ_P0059318 Zmynd8 protein_coding protein_coding MGP_129S1SvImJ_T0059319.1 MGP_129S1SvImJ_G0026898.1 mouse_genomes_project 2 171364586 171480281 - MGP_129S1SvImJ_P0059319 Zmynd8 protein_coding protein_coding MGP_129S1SvImJ_T0059320.1 MGP_129S1SvImJ_G0026898.1 mouse_genomes_project 2 171414391 171469514 - MGP_129S1SvImJ_P0059320 Zmynd8 protein_coding protein_coding MGP_129S1SvImJ_T0059321.1 MGP_129S1SvImJ_G0026898.1 mouse_genomes_project 2 171414446 171493679 - MGP_129S1SvImJ_P0059321 Zmynd8 protein_coding protein_coding MGP_129S1SvImJ_T0059322.1 MGP_129S1SvImJ_G0026898.1 mouse_genomes_project 2 171421260 171448798 - Zmynd8 protein_coding processed_transcript MGP_129S1SvImJ_T0059323.1 MGP_129S1SvImJ_G0026898.1 mouse_genomes_project 2 171430697 171495450 - MGP_129S1SvImJ_P0059323 Zmynd8 protein_coding protein_coding MGP_129S1SvImJ_T0059324.1 MGP_129S1SvImJ_G0026898.1 mouse_genomes_project 2 171433434 171452631 - Zmynd8 protein_coding processed_transcript MGP_129S1SvImJ_T0059325.1 MGP_129S1SvImJ_G0026898.1 mouse_genomes_project 2 171436396 171442769 - Zmynd8 protein_coding processed_transcript MGP_129S1SvImJ_T0059326.1 MGP_129S1SvImJ_G0026898.1 mouse_genomes_project 2 171442679 171470336 - Zmynd8 protein_coding processed_transcript MGP_129S1SvImJ_T0059327.1 MGP_129S1SvImJ_G0026898.1 mouse_genomes_project 2 171442679 171470144 - MGP_129S1SvImJ_P0059327 Zmynd8 protein_coding protein_coding MGP_129S1SvImJ_T0059328.1 MGP_129S1SvImJ_G0026898.1 mouse_genomes_project 2 171442680 171473578 - Zmynd8 protein_coding processed_transcript MGP_129S1SvImJ_T0059329.1 MGP_129S1SvImJ_G0026898.1 mouse_genomes_project 2 171466733 171479617 - Zmynd8 protein_coding processed_transcript MGP_129S1SvImJ_T0059330.1 MGP_129S1SvImJ_G0026898.1 mouse_genomes_project 2 171468607 171479646 - Zmynd8 protein_coding retained_intron MGP_129S1SvImJ_T0059331.1 MGP_129S1SvImJ_G0026898.1 mouse_genomes_project 2 171468885 171469927 - Zmynd8 protein_coding retained_intron MGP_129S1SvImJ_T0059332.1 MGP_129S1SvImJ_G0026898.1 mouse_genomes_project 2 171468993 171480158 - Zmynd8 protein_coding retained_intron MGP_129S1SvImJ_T0058139.1 MGP_129S1SvImJ_G0026610.1 mouse_genomes_project 2 153027941 153041100 + MGP_129S1SvImJ_P0058139 Gzf1 protein_coding protein_coding MGP_129S1SvImJ_T0058140.1 MGP_129S1SvImJ_G0026610.1 mouse_genomes_project 2 153028129 153030968 + MGP_129S1SvImJ_P0058140 Gzf1 protein_coding protein_coding MGP_129S1SvImJ_T0058141.1 MGP_129S1SvImJ_G0026610.1 mouse_genomes_project 2 153031530 153038366 + Gzf1 protein_coding processed_transcript MGP_129S1SvImJ_T0054345.1 MGP_129S1SvImJ_G0025642.1 mouse_genomes_project 2 33413187 33431401 - Fbxw2 protein_coding processed_transcript MGP_129S1SvImJ_T0054346.1 MGP_129S1SvImJ_G0025642.1 mouse_genomes_project 2 33413851 33434554 - MGP_129S1SvImJ_P0054346 Fbxw2 protein_coding protein_coding MGP_129S1SvImJ_T0054347.1 MGP_129S1SvImJ_G0025642.1 mouse_genomes_project 2 33414011 33431662 - MGP_129S1SvImJ_P0054347 Fbxw2 protein_coding protein_coding MGP_129S1SvImJ_T0054348.1 MGP_129S1SvImJ_G0025642.1 mouse_genomes_project 2 33414012 33434716 - MGP_129S1SvImJ_P0054348 Fbxw2 protein_coding protein_coding MGP_129S1SvImJ_T0054349.1 MGP_129S1SvImJ_G0025642.1 mouse_genomes_project 2 33414014 33434711 - MGP_129S1SvImJ_P0054349 Fbxw2 protein_coding protein_coding MGP_129S1SvImJ_T0054350.1 MGP_129S1SvImJ_G0025642.1 mouse_genomes_project 2 33414014 33434552 - MGP_129S1SvImJ_P0054350 Fbxw2 protein_coding protein_coding MGP_129S1SvImJ_T0054351.1 MGP_129S1SvImJ_G0025642.1 mouse_genomes_project 2 33414926 33434682 - MGP_129S1SvImJ_P0054351 Fbxw2 protein_coding protein_coding MGP_129S1SvImJ_T0054352.1 MGP_129S1SvImJ_G0025642.1 mouse_genomes_project 2 33415951 33417323 - Fbxw2 protein_coding processed_transcript MGP_129S1SvImJ_T0054353.1 MGP_129S1SvImJ_G0025642.1 mouse_genomes_project 2 33420500 33434792 - Fbxw2 protein_coding processed_transcript MGP_129S1SvImJ_T0054354.1 MGP_129S1SvImJ_G0025642.1 mouse_genomes_project 2 33421399 33434648 - Fbxw2 protein_coding processed_transcript MGP_129S1SvImJ_T0054355.1 MGP_129S1SvImJ_G0025642.1 mouse_genomes_project 2 33423929 33434698 - Fbxw2 protein_coding processed_transcript MGP_129S1SvImJ_T0054356.1 MGP_129S1SvImJ_G0025642.1 mouse_genomes_project 2 33430330 33434688 - Fbxw2 protein_coding retained_intron MGP_129S1SvImJ_T0054357.1 MGP_129S1SvImJ_G0025642.1 mouse_genomes_project 2 33431084 33434503 - Fbxw2 protein_coding processed_transcript MGP_129S1SvImJ_T0054358.1 MGP_129S1SvImJ_G0025642.1 mouse_genomes_project 2 33433743 33434696 - Fbxw2 protein_coding processed_transcript MGP_129S1SvImJ_T0053459.1 MGP_129S1SvImJ_G0025505.1 mouse_genomes_project 2 24948280 24975038 + MGP_129S1SvImJ_P0053459 Adamts13 protein_coding protein_coding MGP_129S1SvImJ_T0053460.1 MGP_129S1SvImJ_G0025505.1 mouse_genomes_project 2 24948357 24980190 + MGP_129S1SvImJ_P0053460 Adamts13 protein_coding protein_coding MGP_129S1SvImJ_T0053461.1 MGP_129S1SvImJ_G0025505.1 mouse_genomes_project 2 24977204 24980007 + Adamts13 protein_coding processed_transcript MGP_129S1SvImJ_T0102444.1 MGP_129S1SvImJ_G0040278.1 mouse_genomes_project 2 143042567 143042796 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102392.1 MGP_129S1SvImJ_G0040226.1 mouse_genomes_project 2 38187908 38199095 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0055127.1 MGP_129S1SvImJ_G0025798.1 mouse_genomes_project 2 69344346 69371780 + MGP_129S1SvImJ_P0055127 Dhrs9 protein_coding protein_coding MGP_129S1SvImJ_T0057127.1 MGP_129S1SvImJ_G0026382.1 mouse_genomes_project 2 124024216 124028927 + Adal protein_coding retained_intron MGP_129S1SvImJ_T0057128.1 MGP_129S1SvImJ_G0026382.1 mouse_genomes_project 2 124024227 124040648 + MGP_129S1SvImJ_P0057128 Adal protein_coding protein_coding MGP_129S1SvImJ_T0057129.1 MGP_129S1SvImJ_G0026382.1 mouse_genomes_project 2 124024232 124028925 + Adal protein_coding retained_intron MGP_129S1SvImJ_T0057130.1 MGP_129S1SvImJ_G0026382.1 mouse_genomes_project 2 124024241 124034246 + Adal protein_coding processed_transcript MGP_129S1SvImJ_T0057131.1 MGP_129S1SvImJ_G0026382.1 mouse_genomes_project 2 124024287 124039559 + MGP_129S1SvImJ_P0057131 Adal protein_coding protein_coding MGP_129S1SvImJ_T0057132.1 MGP_129S1SvImJ_G0026382.1 mouse_genomes_project 2 124024309 124034434 + Adal protein_coding retained_intron MGP_129S1SvImJ_T0057133.1 MGP_129S1SvImJ_G0026382.1 mouse_genomes_project 2 124025679 124040861 + MGP_129S1SvImJ_P0057133 Adal protein_coding protein_coding MGP_129S1SvImJ_T0057134.1 MGP_129S1SvImJ_G0026382.1 mouse_genomes_project 2 124034009 124040309 + Adal protein_coding retained_intron MGP_129S1SvImJ_T0010474.1 MGP_129S1SvImJ_G0008590.1 mouse_genomes_project 2 133433014 133433131 - Mir6339 miRNA miRNA MGP_129S1SvImJ_T0052520.1 MGP_129S1SvImJ_G0025342.1 mouse_genomes_project 2 8550607 8651187 + Prkcq protein_coding retained_intron MGP_129S1SvImJ_T0052521.1 MGP_129S1SvImJ_G0025342.1 mouse_genomes_project 2 8550805 8676176 + Prkcq protein_coding retained_intron MGP_129S1SvImJ_T0052522.1 MGP_129S1SvImJ_G0025342.1 mouse_genomes_project 2 8606572 8693011 + MGP_129S1SvImJ_P0052522 Prkcq protein_coding protein_coding MGP_129S1SvImJ_T0052523.1 MGP_129S1SvImJ_G0025342.1 mouse_genomes_project 2 8610474 8691901 + MGP_129S1SvImJ_P0052523 Prkcq protein_coding protein_coding MGP_129S1SvImJ_T0052524.1 MGP_129S1SvImJ_G0025342.1 mouse_genomes_project 2 8633018 8640588 + Prkcq protein_coding retained_intron MGP_129S1SvImJ_T0052525.1 MGP_129S1SvImJ_G0025342.1 mouse_genomes_project 2 8635421 8692480 + Prkcq protein_coding processed_transcript MGP_129S1SvImJ_T0056896.1 MGP_129S1SvImJ_G0026342.1 mouse_genomes_project 2 122108403 122111553 + MGP_129S1SvImJ_P0056896 Chac1 protein_coding protein_coding MGP_129S1SvImJ_T0003949.1 MGP_129S1SvImJ_G0003527.1 mouse_genomes_project 2 24616566 24619148 + antisense antisense MGP_129S1SvImJ_T0003950.1 MGP_129S1SvImJ_G0003527.1 mouse_genomes_project 2 24616758 24619148 + antisense antisense MGP_129S1SvImJ_T0059749.1 MGP_129S1SvImJ_G0027002.1 mouse_genomes_project 2 187263335 187286751 + MGP_129S1SvImJ_P0059749 Slc17a9 protein_coding protein_coding MGP_129S1SvImJ_T0059750.1 MGP_129S1SvImJ_G0027002.1 mouse_genomes_project 2 187263451 187277901 + Slc17a9 protein_coding retained_intron MGP_129S1SvImJ_T0059751.1 MGP_129S1SvImJ_G0027002.1 mouse_genomes_project 2 187263472 187281584 + Slc17a9 protein_coding processed_transcript MGP_129S1SvImJ_T0059752.1 MGP_129S1SvImJ_G0027002.1 mouse_genomes_project 2 187280889 187285810 + Slc17a9 protein_coding processed_transcript MGP_129S1SvImJ_T0059753.1 MGP_129S1SvImJ_G0027002.1 mouse_genomes_project 2 187282745 187285888 + Slc17a9 protein_coding retained_intron MGP_129S1SvImJ_T0058167.1 MGP_129S1SvImJ_G0026624.1 mouse_genomes_project 2 154220536 154221226 - MGP_129S1SvImJ_P0058167 C530025M09Rik protein_coding protein_coding MGP_129S1SvImJ_T0059107.1 MGP_129S1SvImJ_G0026840.1 mouse_genomes_project 2 169594658 169595926 - MGP_129S1SvImJ_P0059107 Wfdc15a protein_coding protein_coding MGP_129S1SvImJ_T0052658.1 MGP_129S1SvImJ_G0025359.1 mouse_genomes_project 2 11365521 11562844 - MGP_129S1SvImJ_P0052658 Hacd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052659.1 MGP_129S1SvImJ_G0025359.1 mouse_genomes_project 2 11536085 11562675 - MGP_129S1SvImJ_P0052659 Hacd1 protein_coding protein_coding MGP_129S1SvImJ_T0055784.1 MGP_129S1SvImJ_G0025990.1 mouse_genomes_project 2 87969529 87970462 - MGP_129S1SvImJ_P0055784 Olfr1101 protein_coding protein_coding MGP_129S1SvImJ_T0053797.1 MGP_129S1SvImJ_G0025563.1 mouse_genomes_project 2 28502589 28504693 - MGP_129S1SvImJ_P0053797 Dolk protein_coding protein_coding MGP_129S1SvImJ_T0058966.1 MGP_129S1SvImJ_G0026805.1 mouse_genomes_project 2 165840662 165922930 + MGP_129S1SvImJ_P0058966 Top1 protein_coding protein_coding MGP_129S1SvImJ_T0058967.1 MGP_129S1SvImJ_G0026805.1 mouse_genomes_project 2 165840754 165844882 + Top1 protein_coding processed_transcript MGP_129S1SvImJ_T0058968.1 MGP_129S1SvImJ_G0026805.1 mouse_genomes_project 2 165865960 165883694 + Top1 protein_coding retained_intron MGP_129S1SvImJ_T0058969.1 MGP_129S1SvImJ_G0026805.1 mouse_genomes_project 2 165884411 165892364 + Top1 protein_coding retained_intron MGP_129S1SvImJ_T0058970.1 MGP_129S1SvImJ_G0026805.1 mouse_genomes_project 2 165902361 165903898 + Top1 protein_coding processed_transcript MGP_129S1SvImJ_T0058971.1 MGP_129S1SvImJ_G0026805.1 mouse_genomes_project 2 165917663 165921550 + Top1 protein_coding retained_intron MGP_129S1SvImJ_T0059758.1 MGP_129S1SvImJ_G0027005.1 mouse_genomes_project 2 187496116 187501108 + Birc7 protein_coding retained_intron MGP_129S1SvImJ_T0059759.1 MGP_129S1SvImJ_G0027005.1 mouse_genomes_project 2 187496116 187501111 + MGP_129S1SvImJ_P0059759 Birc7 protein_coding protein_coding MGP_129S1SvImJ_T0052369.1 MGP_129S1SvImJ_G0025314.1 mouse_genomes_project 2 1673997 1705655 - MGP_129S1SvImJ_P0052369 Prpf18 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0052370.1 MGP_129S1SvImJ_G0025314.1 mouse_genomes_project 2 1673997 1705760 - MGP_129S1SvImJ_P0052370 Prpf18 protein_coding protein_coding MGP_129S1SvImJ_T0052371.1 MGP_129S1SvImJ_G0025314.1 mouse_genomes_project 2 1675873 1705780 - Prpf18 protein_coding processed_transcript MGP_129S1SvImJ_T0052372.1 MGP_129S1SvImJ_G0025314.1 mouse_genomes_project 2 1675964 1705787 - MGP_129S1SvImJ_P0052372 Prpf18 protein_coding protein_coding MGP_129S1SvImJ_T0052373.1 MGP_129S1SvImJ_G0025314.1 mouse_genomes_project 2 1690934 1705755 - MGP_129S1SvImJ_P0052373 Prpf18 protein_coding protein_coding MGP_129S1SvImJ_T0052374.1 MGP_129S1SvImJ_G0025314.1 mouse_genomes_project 2 1690958 1705761 - Prpf18 protein_coding processed_transcript MGP_129S1SvImJ_T0052375.1 MGP_129S1SvImJ_G0025314.1 mouse_genomes_project 2 1697344 1705777 - Prpf18 protein_coding processed_transcript MGP_129S1SvImJ_T0052506.1 MGP_129S1SvImJ_G0025338.1 mouse_genomes_project 2 7433233 7444460 + Kin protein_coding processed_transcript MGP_129S1SvImJ_T0052507.1 MGP_129S1SvImJ_G0025338.1 mouse_genomes_project 2 7433264 7445447 + MGP_129S1SvImJ_P0052507 Kin protein_coding protein_coding MGP_129S1SvImJ_T0052508.1 MGP_129S1SvImJ_G0025338.1 mouse_genomes_project 2 7442937 7444820 + Kin protein_coding processed_transcript MGP_129S1SvImJ_T0010403.1 MGP_129S1SvImJ_G0008519.1 mouse_genomes_project 2 25384892 25384992 + Gm24049 miRNA miRNA MGP_129S1SvImJ_T0056813.1 MGP_129S1SvImJ_G0026321.1 mouse_genomes_project 2 121458543 121467041 - MGP_129S1SvImJ_P0056813 protein_coding protein_coding MGP_129S1SvImJ_T0056814.1 MGP_129S1SvImJ_G0026321.1 mouse_genomes_project 2 121461877 121467005 - protein_coding retained_intron MGP_129S1SvImJ_T0101672.1 MGP_129S1SvImJ_G0039693.1 mouse_genomes_project 2 75180955 75181561 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0010390.1 MGP_129S1SvImJ_G0008506.1 mouse_genomes_project 2 14580402 14580512 - Gm24933 miRNA miRNA MGP_129S1SvImJ_T0057493.1 MGP_129S1SvImJ_G0026458.1 mouse_genomes_project 2 130653814 130657832 + MGP_129S1SvImJ_P0057493 Adra2b protein_coding protein_coding MGP_129S1SvImJ_T0057494.1 MGP_129S1SvImJ_G0026458.1 mouse_genomes_project 2 130653892 130657832 + MGP_129S1SvImJ_P0057494 Adra2b protein_coding protein_coding MGP_129S1SvImJ_T0013807.1 MGP_129S1SvImJ_G0011896.1 mouse_genomes_project 2 147926561 147926894 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054550.1 MGP_129S1SvImJ_G0025700.1 mouse_genomes_project 2 36518228 37029000 - MGP_129S1SvImJ_P0054550 Dennd1a protein_coding protein_coding MGP_129S1SvImJ_T0054551.1 MGP_129S1SvImJ_G0025700.1 mouse_genomes_project 2 36520309 36573443 - MGP_129S1SvImJ_P0054551 Dennd1a protein_coding protein_coding MGP_129S1SvImJ_T0054552.1 MGP_129S1SvImJ_G0025700.1 mouse_genomes_project 2 36537932 37029015 - MGP_129S1SvImJ_P0054552 Dennd1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054553.1 MGP_129S1SvImJ_G0025700.1 mouse_genomes_project 2 36660755 37029002 - MGP_129S1SvImJ_P0054553 Dennd1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054554.1 MGP_129S1SvImJ_G0025700.1 mouse_genomes_project 2 36660800 37028813 - MGP_129S1SvImJ_P0054554 Dennd1a protein_coding protein_coding MGP_129S1SvImJ_T0054555.1 MGP_129S1SvImJ_G0025700.1 mouse_genomes_project 2 36747806 36896890 - Dennd1a protein_coding retained_intron MGP_129S1SvImJ_T0054556.1 MGP_129S1SvImJ_G0025700.1 mouse_genomes_project 2 36771489 37028983 - MGP_129S1SvImJ_P0054556 Dennd1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054557.1 MGP_129S1SvImJ_G0025700.1 mouse_genomes_project 2 36854710 37028843 - MGP_129S1SvImJ_P0054557 Dennd1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054558.1 MGP_129S1SvImJ_G0025700.1 mouse_genomes_project 2 36888575 36976274 - Dennd1a protein_coding retained_intron MGP_129S1SvImJ_T0054559.1 MGP_129S1SvImJ_G0025700.1 mouse_genomes_project 2 36894546 36898628 - Dennd1a protein_coding retained_intron MGP_129S1SvImJ_T0054560.1 MGP_129S1SvImJ_G0025700.1 mouse_genomes_project 2 36970167 37028839 - Dennd1a protein_coding retained_intron MGP_129S1SvImJ_T0013743.1 MGP_129S1SvImJ_G0011832.1 mouse_genomes_project 2 117566395 117567289 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0052898.1 MGP_129S1SvImJ_G0025404.1 mouse_genomes_project 2 21969666 21978019 + MGP_129S1SvImJ_P0052898 Il1f9 protein_coding protein_coding MGP_129S1SvImJ_T0057452.1 MGP_129S1SvImJ_G0026448.1 mouse_genomes_project 2 130322801 130340425 + Blvra protein_coding retained_intron MGP_129S1SvImJ_T0057453.1 MGP_129S1SvImJ_G0026448.1 mouse_genomes_project 2 130322803 130349810 + MGP_129S1SvImJ_P0057453 Blvra protein_coding protein_coding MGP_129S1SvImJ_T0057454.1 MGP_129S1SvImJ_G0026448.1 mouse_genomes_project 2 130322815 130342972 + MGP_129S1SvImJ_P0057454 Blvra protein_coding protein_coding MGP_129S1SvImJ_T0057455.1 MGP_129S1SvImJ_G0026448.1 mouse_genomes_project 2 130322829 130339974 + MGP_129S1SvImJ_P0057455 Blvra protein_coding protein_coding MGP_129S1SvImJ_T0057456.1 MGP_129S1SvImJ_G0026448.1 mouse_genomes_project 2 130332594 130344864 + MGP_129S1SvImJ_P0057456 Blvra protein_coding protein_coding MGP_129S1SvImJ_T0017816.1 MGP_129S1SvImJ_G0015425.1 mouse_genomes_project 2 70049367 70053177 + Gm13631 processed_transcript processed_transcript MGP_129S1SvImJ_T0007151.1 MGP_129S1SvImJ_G0005870.1 mouse_genomes_project 2 10151661 10161115 + Gm37565 lincRNA lincRNA MGP_129S1SvImJ_T0013772.1 MGP_129S1SvImJ_G0011861.1 mouse_genomes_project 2 133859172 133860005 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017901.1 MGP_129S1SvImJ_G0015468.1 mouse_genomes_project 2 132431537 132436269 - Gm14022 processed_transcript processed_transcript MGP_129S1SvImJ_T0055719.1 MGP_129S1SvImJ_G0025929.1 mouse_genomes_project 2 86363494 86364439 + MGP_129S1SvImJ_P0055719 Olfr998 protein_coding protein_coding MGP_129S1SvImJ_T0059296.1 MGP_129S1SvImJ_G0026892.1 mouse_genomes_project 2 170932841 170946775 - MGP_129S1SvImJ_P0059296 Zfp334 protein_coding protein_coding MGP_129S1SvImJ_T0013441.1 MGP_129S1SvImJ_G0011530.1 mouse_genomes_project 2 12193998 12194716 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056386.1 MGP_129S1SvImJ_G0026198.1 mouse_genomes_project 2 104583629 104721646 + MGP_129S1SvImJ_P0056386 Slc1a2 protein_coding protein_coding MGP_129S1SvImJ_T0056387.1 MGP_129S1SvImJ_G0026198.1 mouse_genomes_project 2 104584193 104664600 + Slc1a2 protein_coding processed_transcript MGP_129S1SvImJ_T0056388.1 MGP_129S1SvImJ_G0026198.1 mouse_genomes_project 2 104584228 104664597 + Slc1a2 protein_coding processed_transcript MGP_129S1SvImJ_T0056389.1 MGP_129S1SvImJ_G0026198.1 mouse_genomes_project 2 104584251 104708668 + MGP_129S1SvImJ_P0056389 Slc1a2 protein_coding protein_coding MGP_129S1SvImJ_T0056390.1 MGP_129S1SvImJ_G0026198.1 mouse_genomes_project 2 104601901 104664597 + Slc1a2 protein_coding processed_transcript MGP_129S1SvImJ_T0056391.1 MGP_129S1SvImJ_G0026198.1 mouse_genomes_project 2 104633811 104668514 + MGP_129S1SvImJ_P0056391 Slc1a2 protein_coding protein_coding MGP_129S1SvImJ_T0056392.1 MGP_129S1SvImJ_G0026198.1 mouse_genomes_project 2 104633893 104712310 + MGP_129S1SvImJ_P0056392 Slc1a2 protein_coding protein_coding MGP_129S1SvImJ_T0056393.1 MGP_129S1SvImJ_G0026198.1 mouse_genomes_project 2 104633893 104708677 + MGP_129S1SvImJ_P0056393 Slc1a2 protein_coding protein_coding MGP_129S1SvImJ_T0056394.1 MGP_129S1SvImJ_G0026198.1 mouse_genomes_project 2 104647636 104664593 + Slc1a2 protein_coding processed_transcript MGP_129S1SvImJ_T0056395.1 MGP_129S1SvImJ_G0026198.1 mouse_genomes_project 2 104686480 104708155 + MGP_129S1SvImJ_P0056395 Slc1a2 protein_coding protein_coding MGP_129S1SvImJ_T0056396.1 MGP_129S1SvImJ_G0026198.1 mouse_genomes_project 2 104691744 104712124 + MGP_129S1SvImJ_P0056396 Slc1a2 protein_coding protein_coding MGP_129S1SvImJ_T0059039.1 MGP_129S1SvImJ_G0026819.1 mouse_genomes_project 2 168525570 168655913 + MGP_129S1SvImJ_P0059039 Tox2 protein_coding protein_coding MGP_129S1SvImJ_T0059040.1 MGP_129S1SvImJ_G0026819.1 mouse_genomes_project 2 168526998 168600037 + MGP_129S1SvImJ_P0059040 Tox2 protein_coding protein_coding MGP_129S1SvImJ_T0059041.1 MGP_129S1SvImJ_G0026819.1 mouse_genomes_project 2 168547776 168654771 + MGP_129S1SvImJ_P0059041 Tox2 protein_coding protein_coding MGP_129S1SvImJ_T0059042.1 MGP_129S1SvImJ_G0026819.1 mouse_genomes_project 2 168547867 168654571 + MGP_129S1SvImJ_P0059042 Tox2 protein_coding protein_coding MGP_129S1SvImJ_T0059043.1 MGP_129S1SvImJ_G0026819.1 mouse_genomes_project 2 168651846 168654571 + MGP_129S1SvImJ_P0059043 Tox2 protein_coding protein_coding MGP_129S1SvImJ_T0055275.1 MGP_129S1SvImJ_G0025827.1 mouse_genomes_project 2 72038421 72068840 + MGP_129S1SvImJ_P0055275 Pdk1 protein_coding protein_coding MGP_129S1SvImJ_T0055276.1 MGP_129S1SvImJ_G0025827.1 mouse_genomes_project 2 72038517 72048981 + Pdk1 protein_coding processed_transcript MGP_129S1SvImJ_T0055277.1 MGP_129S1SvImJ_G0025827.1 mouse_genomes_project 2 72038523 72051357 + Pdk1 protein_coding processed_transcript MGP_129S1SvImJ_T0055278.1 MGP_129S1SvImJ_G0025827.1 mouse_genomes_project 2 72038543 72066968 + Pdk1 protein_coding processed_transcript MGP_129S1SvImJ_T0055279.1 MGP_129S1SvImJ_G0025827.1 mouse_genomes_project 2 72038748 72049232 + Pdk1 protein_coding processed_transcript MGP_129S1SvImJ_T0055280.1 MGP_129S1SvImJ_G0025827.1 mouse_genomes_project 2 72038940 72054009 + Pdk1 protein_coding processed_transcript MGP_129S1SvImJ_T0055281.1 MGP_129S1SvImJ_G0025827.1 mouse_genomes_project 2 72040274 72048660 + Pdk1 protein_coding processed_transcript MGP_129S1SvImJ_T0055282.1 MGP_129S1SvImJ_G0025827.1 mouse_genomes_project 2 72052473 72061466 + Pdk1 protein_coding processed_transcript MGP_129S1SvImJ_T0059519.1 MGP_129S1SvImJ_G0026939.1 mouse_genomes_project 2 178177782 178185024 - MGP_129S1SvImJ_P0059519 Cbln4 protein_coding protein_coding MGP_129S1SvImJ_T0013849.1 MGP_129S1SvImJ_G0011938.1 mouse_genomes_project 2 160912643 160913186 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054294.1 MGP_129S1SvImJ_G0025635.1 mouse_genomes_project 2 32093180 32173829 - MGP_129S1SvImJ_P0054294 Lmx1b protein_coding protein_coding MGP_129S1SvImJ_T0054295.1 MGP_129S1SvImJ_G0025635.1 mouse_genomes_project 2 32093491 32173947 - MGP_129S1SvImJ_P0054295 Lmx1b protein_coding protein_coding MGP_129S1SvImJ_T0054296.1 MGP_129S1SvImJ_G0025635.1 mouse_genomes_project 2 32096011 32165647 - Lmx1b protein_coding processed_transcript MGP_129S1SvImJ_T0058021.1 MGP_129S1SvImJ_G0026582.1 mouse_genomes_project 2 148343283 148354332 + MGP_129S1SvImJ_P0058021 Mgme1 protein_coding protein_coding MGP_129S1SvImJ_T0058022.1 MGP_129S1SvImJ_G0026582.1 mouse_genomes_project 2 148343520 148355038 + MGP_129S1SvImJ_P0058022 Mgme1 protein_coding protein_coding MGP_129S1SvImJ_T0058023.1 MGP_129S1SvImJ_G0026582.1 mouse_genomes_project 2 148343561 148354332 + MGP_129S1SvImJ_P0058023 Mgme1 protein_coding protein_coding MGP_129S1SvImJ_T0003926.1 MGP_129S1SvImJ_G0003510.1 mouse_genomes_project 2 15700157 15708655 + Gm13330 antisense antisense MGP_129S1SvImJ_T0007318.1 MGP_129S1SvImJ_G0006002.1 mouse_genomes_project 2 120487353 120573054 + 4930412B13Rik lincRNA lincRNA MGP_129S1SvImJ_T0099682.1 MGP_129S1SvImJ_G0037749.1 mouse_genomes_project 2 81587709 81587816 - Gm23452 snRNA snRNA MGP_129S1SvImJ_T0055572.1 MGP_129S1SvImJ_G0025888.1 mouse_genomes_project 2 81255595 81258661 + MGP_129S1SvImJ_P0055572 protein_coding protein_coding MGP_129S1SvImJ_T0013812.1 MGP_129S1SvImJ_G0011901.1 mouse_genomes_project 2 149043012 149043833 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001051.1 MGP_129S1SvImJ_G0000980.1 mouse_genomes_project 2 8610900 8613465 + TEC TEC MGP_129S1SvImJ_T0007429.1 MGP_129S1SvImJ_G0006096.1 mouse_genomes_project 2 177299071 177378610 + Gm14266 lincRNA lincRNA MGP_129S1SvImJ_T0007432.1 MGP_129S1SvImJ_G0006096.1 mouse_genomes_project 2 177362265 177380768 + Gm14266 lincRNA lincRNA MGP_129S1SvImJ_T0013564.1 MGP_129S1SvImJ_G0011653.1 mouse_genomes_project 2 57883158 57883640 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013896.1 MGP_129S1SvImJ_G0011985.1 mouse_genomes_project 2 181541249 181541480 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007329.1 MGP_129S1SvImJ_G0006011.1 mouse_genomes_project 2 129737562 129771062 - Gm26697 lincRNA lincRNA MGP_129S1SvImJ_T0010507.1 MGP_129S1SvImJ_G0008623.1 mouse_genomes_project 2 186916790 186916894 + Mir133a-2 miRNA miRNA MGP_129S1SvImJ_T0013659.1 MGP_129S1SvImJ_G0011748.1 mouse_genomes_project 2 88354647 88354879 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0052647.1 MGP_129S1SvImJ_G0025356.1 mouse_genomes_project 2 11010317 11045992 - MGP_129S1SvImJ_P0052647 Trdmt1 protein_coding protein_coding MGP_129S1SvImJ_T0052648.1 MGP_129S1SvImJ_G0025356.1 mouse_genomes_project 2 11017421 11045974 - Trdmt1 protein_coding processed_transcript MGP_129S1SvImJ_T0052649.1 MGP_129S1SvImJ_G0025356.1 mouse_genomes_project 2 11023422 11045987 - MGP_129S1SvImJ_P0052649 Trdmt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057886.1 MGP_129S1SvImJ_G0026549.1 mouse_genomes_project 2 136499476 136513533 - MGP_129S1SvImJ_P0057886 Lrrn4 protein_coding protein_coding MGP_129S1SvImJ_T0013773.1 MGP_129S1SvImJ_G0011862.1 mouse_genomes_project 2 134371626 134374646 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010506.1 MGP_129S1SvImJ_G0008622.1 mouse_genomes_project 2 186904777 186904854 + Mir1a-1 miRNA miRNA MGP_129S1SvImJ_T0007239.1 MGP_129S1SvImJ_G0005939.1 mouse_genomes_project 2 74447124 74462071 + Gm13667 lincRNA lincRNA MGP_129S1SvImJ_T0010458.1 MGP_129S1SvImJ_G0008574.1 mouse_genomes_project 2 105846082 105846178 - Gm22761 miRNA miRNA MGP_129S1SvImJ_T0058950.1 MGP_129S1SvImJ_G0026800.1 mouse_genomes_project 2 163867174 163885720 + MGP_129S1SvImJ_P0058950 Fam83d protein_coding protein_coding MGP_129S1SvImJ_T0058951.1 MGP_129S1SvImJ_G0026800.1 mouse_genomes_project 2 163880490 163885720 + Fam83d protein_coding retained_intron MGP_129S1SvImJ_T0013437.1 MGP_129S1SvImJ_G0011526.1 mouse_genomes_project 2 8816367 8817364 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001111.1 MGP_129S1SvImJ_G0001040.1 mouse_genomes_project 2 79473122 79616454 + TEC TEC MGP_129S1SvImJ_T0057769.1 MGP_129S1SvImJ_G0026525.1 mouse_genomes_project 2 134687924 134692723 - MGP_129S1SvImJ_P0057769 Cenpb protein_coding protein_coding MGP_129S1SvImJ_T0056735.1 MGP_129S1SvImJ_G0026305.1 mouse_genomes_project 2 118135797 118337667 + MGP_129S1SvImJ_P0056735 BC052040 protein_coding protein_coding MGP_129S1SvImJ_T0056736.1 MGP_129S1SvImJ_G0026305.1 mouse_genomes_project 2 118135814 118337667 + MGP_129S1SvImJ_P0056736 BC052040 protein_coding protein_coding MGP_129S1SvImJ_T0056737.1 MGP_129S1SvImJ_G0026305.1 mouse_genomes_project 2 118135882 118195143 + BC052040 protein_coding processed_transcript MGP_129S1SvImJ_T0013852.1 MGP_129S1SvImJ_G0011941.1 mouse_genomes_project 2 161268952 161269434 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055009.1 MGP_129S1SvImJ_G0025776.1 mouse_genomes_project 2 64679672 64682879 - Grb14 protein_coding processed_transcript MGP_129S1SvImJ_T0055010.1 MGP_129S1SvImJ_G0025776.1 mouse_genomes_project 2 64679672 64685175 - MGP_129S1SvImJ_P0055010 Grb14 protein_coding protein_coding MGP_129S1SvImJ_T0055011.1 MGP_129S1SvImJ_G0025776.1 mouse_genomes_project 2 64679672 64800047 - MGP_129S1SvImJ_P0055011 Grb14 protein_coding protein_coding MGP_129S1SvImJ_T0055012.1 MGP_129S1SvImJ_G0025776.1 mouse_genomes_project 2 64679672 64685100 - MGP_129S1SvImJ_P0055012 Grb14 protein_coding protein_coding MGP_129S1SvImJ_T0055013.1 MGP_129S1SvImJ_G0025776.1 mouse_genomes_project 2 64697385 64703110 - Grb14 protein_coding processed_transcript MGP_129S1SvImJ_T0055014.1 MGP_129S1SvImJ_G0025776.1 mouse_genomes_project 2 64698853 64746756 - MGP_129S1SvImJ_P0055014 Grb14 protein_coding protein_coding MGP_129S1SvImJ_T0055015.1 MGP_129S1SvImJ_G0025776.1 mouse_genomes_project 2 64704952 64746733 - Grb14 protein_coding processed_transcript MGP_129S1SvImJ_T0055016.1 MGP_129S1SvImJ_G0025776.1 mouse_genomes_project 2 64799932 64802109 - Grb14 protein_coding processed_transcript MGP_129S1SvImJ_T0056766.1 MGP_129S1SvImJ_G0026310.1 mouse_genomes_project 2 119919235 119987645 - MGP_129S1SvImJ_P0056766 Rasgrp1 protein_coding protein_coding MGP_129S1SvImJ_T0056767.1 MGP_129S1SvImJ_G0026310.1 mouse_genomes_project 2 119919236 119987521 - MGP_129S1SvImJ_P0056767 Rasgrp1 protein_coding protein_coding MGP_129S1SvImJ_T0056768.1 MGP_129S1SvImJ_G0026310.1 mouse_genomes_project 2 119921786 119987353 - MGP_129S1SvImJ_P0056768 Rasgrp1 protein_coding protein_coding MGP_129S1SvImJ_T0056769.1 MGP_129S1SvImJ_G0026310.1 mouse_genomes_project 2 119921786 119987353 - MGP_129S1SvImJ_P0056769 Rasgrp1 protein_coding protein_coding MGP_129S1SvImJ_T0056770.1 MGP_129S1SvImJ_G0026310.1 mouse_genomes_project 2 119921786 119987353 - MGP_129S1SvImJ_P0056770 Rasgrp1 protein_coding protein_coding MGP_129S1SvImJ_T0056771.1 MGP_129S1SvImJ_G0026310.1 mouse_genomes_project 2 119921786 119987353 - MGP_129S1SvImJ_P0056771 Rasgrp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056772.1 MGP_129S1SvImJ_G0026310.1 mouse_genomes_project 2 119938939 119987569 - Rasgrp1 protein_coding retained_intron MGP_129S1SvImJ_T0001125.1 MGP_129S1SvImJ_G0001053.1 mouse_genomes_project 2 175969587 175970760 - TEC TEC MGP_129S1SvImJ_T0001126.1 MGP_129S1SvImJ_G0001053.1 mouse_genomes_project 2 175969700 175970560 - TEC TEC MGP_129S1SvImJ_T0055394.1 MGP_129S1SvImJ_G0025853.1 mouse_genomes_project 2 75040526 75064347 + MGP_129S1SvImJ_P0055394 Gm28230 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0013422.1 MGP_129S1SvImJ_G0011511.1 mouse_genomes_project 2 2038644 2038869 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007277.1 MGP_129S1SvImJ_G0005969.1 mouse_genomes_project 2 96297871 96299597 - Gm13793 lincRNA lincRNA MGP_129S1SvImJ_T0017874.1 MGP_129S1SvImJ_G0015458.1 mouse_genomes_project 2 120519213 120785720 - Gm13986 processed_transcript processed_transcript MGP_129S1SvImJ_T0017875.1 MGP_129S1SvImJ_G0015458.1 mouse_genomes_project 2 120743129 120785609 - Gm13986 processed_transcript processed_transcript MGP_129S1SvImJ_T0013716.1 MGP_129S1SvImJ_G0011805.1 mouse_genomes_project 2 107176555 107176977 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056253.1 MGP_129S1SvImJ_G0026172.1 mouse_genomes_project 2 94441810 94530357 - MGP_129S1SvImJ_P0056253 Prdm11 protein_coding protein_coding MGP_129S1SvImJ_T0056254.1 MGP_129S1SvImJ_G0026172.1 mouse_genomes_project 2 94452905 94530930 - MGP_129S1SvImJ_P0056254 Prdm11 protein_coding protein_coding MGP_129S1SvImJ_T0056255.1 MGP_129S1SvImJ_G0026172.1 mouse_genomes_project 2 94464238 94493692 - MGP_129S1SvImJ_P0056255 Prdm11 protein_coding protein_coding MGP_129S1SvImJ_T0056256.1 MGP_129S1SvImJ_G0026172.1 mouse_genomes_project 2 94487860 94493092 - Prdm11 protein_coding processed_transcript MGP_129S1SvImJ_T0056257.1 MGP_129S1SvImJ_G0026172.1 mouse_genomes_project 2 94491808 94530953 - MGP_129S1SvImJ_P0056257 Prdm11 protein_coding protein_coding MGP_129S1SvImJ_T0013589.1 MGP_129S1SvImJ_G0011678.1 mouse_genomes_project 2 66296220 66296592 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0052897.1 MGP_129S1SvImJ_G0025403.1 mouse_genomes_project 2 21935040 21942922 + MGP_129S1SvImJ_P0052897 Il1f8 protein_coding protein_coding MGP_129S1SvImJ_T0004119.1 MGP_129S1SvImJ_G0003646.1 mouse_genomes_project 2 138874600 138920604 - 4930545L23Rik antisense antisense MGP_129S1SvImJ_T0100977.1 MGP_129S1SvImJ_G0039044.1 mouse_genomes_project 2 152482910 152483223 + Gm24221 snoRNA snoRNA MGP_129S1SvImJ_T0007270.1 MGP_129S1SvImJ_G0005966.1 mouse_genomes_project 2 94572734 94584952 - Gm13802 lincRNA lincRNA MGP_129S1SvImJ_T0100967.1 MGP_129S1SvImJ_G0039034.1 mouse_genomes_project 2 133486524 133486611 + Gm22424 snoRNA snoRNA MGP_129S1SvImJ_T0017955.1 MGP_129S1SvImJ_G0015494.1 mouse_genomes_project 2 178598138 178612914 - Gm14455 processed_transcript processed_transcript MGP_129S1SvImJ_T0001087.1 MGP_129S1SvImJ_G0001016.1 mouse_genomes_project 2 34075385 34076376 - TEC TEC MGP_129S1SvImJ_T0004094.1 MGP_129S1SvImJ_G0003631.1 mouse_genomes_project 2 130979588 130988033 + Gm14244 antisense antisense MGP_129S1SvImJ_T0055768.1 MGP_129S1SvImJ_G0025976.1 mouse_genomes_project 2 87466359 87467307 - MGP_129S1SvImJ_P0055768 Olfr1079 protein_coding protein_coding MGP_129S1SvImJ_T0055769.1 MGP_129S1SvImJ_G0025976.1 mouse_genomes_project 2 87466359 87470874 - MGP_129S1SvImJ_P0055769 Olfr1079 protein_coding protein_coding MGP_129S1SvImJ_T0055804.1 MGP_129S1SvImJ_G0026010.1 mouse_genomes_project 2 88541869 88545201 - MGP_129S1SvImJ_P0055804 Pramel7 protein_coding protein_coding MGP_129S1SvImJ_T0055805.1 MGP_129S1SvImJ_G0026010.1 mouse_genomes_project 2 88543666 88549613 - Pramel7 protein_coding processed_transcript MGP_129S1SvImJ_T0055806.1 MGP_129S1SvImJ_G0026010.1 mouse_genomes_project 2 88543760 88549802 - Pramel7 protein_coding processed_transcript MGP_129S1SvImJ_T0055807.1 MGP_129S1SvImJ_G0026010.1 mouse_genomes_project 2 88543902 88549622 - Pramel7 protein_coding processed_transcript MGP_129S1SvImJ_T0055843.1 MGP_129S1SvImJ_G0026039.1 mouse_genomes_project 2 89062913 89064060 - MGP_129S1SvImJ_P0055843 protein_coding protein_coding MGP_129S1SvImJ_T0013466.1 MGP_129S1SvImJ_G0011555.1 mouse_genomes_project 2 20433370 20433731 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055935.1 MGP_129S1SvImJ_G0026115.1 mouse_genomes_project 2 91123202 91126630 + MGP_129S1SvImJ_P0055935 Olfr1258 protein_coding protein_coding MGP_129S1SvImJ_T0055936.1 MGP_129S1SvImJ_G0026115.1 mouse_genomes_project 2 91125694 91126630 + MGP_129S1SvImJ_P0055936 Olfr1258 protein_coding protein_coding MGP_129S1SvImJ_T0054043.1 MGP_129S1SvImJ_G0025598.1 mouse_genomes_project 2 30671259 30690625 + MGP_129S1SvImJ_P0054043 Pomt1 protein_coding protein_coding MGP_129S1SvImJ_T0054044.1 MGP_129S1SvImJ_G0025598.1 mouse_genomes_project 2 30671312 30672370 + Pomt1 protein_coding retained_intron MGP_129S1SvImJ_T0054045.1 MGP_129S1SvImJ_G0025598.1 mouse_genomes_project 2 30671341 30679617 + Pomt1 protein_coding retained_intron MGP_129S1SvImJ_T0054046.1 MGP_129S1SvImJ_G0025598.1 mouse_genomes_project 2 30671354 30690621 + Pomt1 protein_coding retained_intron MGP_129S1SvImJ_T0054047.1 MGP_129S1SvImJ_G0025598.1 mouse_genomes_project 2 30671706 30679242 + MGP_129S1SvImJ_P0054047 Pomt1 protein_coding protein_coding MGP_129S1SvImJ_T0054048.1 MGP_129S1SvImJ_G0025598.1 mouse_genomes_project 2 30672008 30679332 + MGP_129S1SvImJ_P0054048 Pomt1 protein_coding protein_coding MGP_129S1SvImJ_T0054049.1 MGP_129S1SvImJ_G0025598.1 mouse_genomes_project 2 30679978 30686529 + MGP_129S1SvImJ_P0054049 Pomt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054050.1 MGP_129S1SvImJ_G0025598.1 mouse_genomes_project 2 30680909 30684311 + Pomt1 protein_coding retained_intron MGP_129S1SvImJ_T0054051.1 MGP_129S1SvImJ_G0025598.1 mouse_genomes_project 2 30683192 30687391 + Pomt1 protein_coding retained_intron MGP_129S1SvImJ_T0054052.1 MGP_129S1SvImJ_G0025598.1 mouse_genomes_project 2 30684282 30689405 + MGP_129S1SvImJ_P0054052 Pomt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054053.1 MGP_129S1SvImJ_G0025598.1 mouse_genomes_project 2 30686892 30688312 + Pomt1 protein_coding retained_intron MGP_129S1SvImJ_T0102412.1 MGP_129S1SvImJ_G0040246.1 mouse_genomes_project 2 87456647 87458184 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0013525.1 MGP_129S1SvImJ_G0011614.1 mouse_genomes_project 2 41022236 41022469 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057843.1 MGP_129S1SvImJ_G0026540.1 mouse_genomes_project 2 135820545 135824583 - MGP_129S1SvImJ_P0057843 protein_coding protein_coding MGP_129S1SvImJ_T0057844.1 MGP_129S1SvImJ_G0026540.1 mouse_genomes_project 2 135821179 135823865 - protein_coding processed_transcript MGP_129S1SvImJ_T0057845.1 MGP_129S1SvImJ_G0026540.1 mouse_genomes_project 2 135822599 135824236 - protein_coding retained_intron MGP_129S1SvImJ_T0057846.1 MGP_129S1SvImJ_G0026540.1 mouse_genomes_project 2 135822699 135823871 - protein_coding retained_intron MGP_129S1SvImJ_T0013678.1 MGP_129S1SvImJ_G0011767.1 mouse_genomes_project 2 93739734 93740424 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0052955.1 MGP_129S1SvImJ_G0025413.1 mouse_genomes_project 2 22767245 22776641 - MGP_129S1SvImJ_P0052955 Arrdc1 protein_coding protein_coding MGP_129S1SvImJ_T0052956.1 MGP_129S1SvImJ_G0025413.1 mouse_genomes_project 2 22767245 22776552 - MGP_129S1SvImJ_P0052956 Arrdc1 protein_coding protein_coding MGP_129S1SvImJ_T0052957.1 MGP_129S1SvImJ_G0025413.1 mouse_genomes_project 2 22767248 22776534 - Arrdc1 protein_coding retained_intron MGP_129S1SvImJ_T0052958.1 MGP_129S1SvImJ_G0025413.1 mouse_genomes_project 2 22767882 22776556 - MGP_129S1SvImJ_P0052958 Arrdc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052959.1 MGP_129S1SvImJ_G0025413.1 mouse_genomes_project 2 22767948 22776534 - Arrdc1 protein_coding retained_intron MGP_129S1SvImJ_T0052960.1 MGP_129S1SvImJ_G0025413.1 mouse_genomes_project 2 22768051 22776531 - MGP_129S1SvImJ_P0052960 Arrdc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052961.1 MGP_129S1SvImJ_G0025413.1 mouse_genomes_project 2 22768076 22769094 - Arrdc1 protein_coding retained_intron MGP_129S1SvImJ_T0052962.1 MGP_129S1SvImJ_G0025413.1 mouse_genomes_project 2 22768216 22776563 - MGP_129S1SvImJ_P0052962 Arrdc1 protein_coding protein_coding MGP_129S1SvImJ_T0052963.1 MGP_129S1SvImJ_G0025413.1 mouse_genomes_project 2 22768565 22769797 - Arrdc1 protein_coding retained_intron MGP_129S1SvImJ_T0052964.1 MGP_129S1SvImJ_G0025413.1 mouse_genomes_project 2 22768805 22776443 - MGP_129S1SvImJ_P0052964 Arrdc1 protein_coding protein_coding MGP_129S1SvImJ_T0052965.1 MGP_129S1SvImJ_G0025413.1 mouse_genomes_project 2 22768888 22770025 - Arrdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0052966.1 MGP_129S1SvImJ_G0025413.1 mouse_genomes_project 2 22769177 22776577 - Arrdc1 protein_coding retained_intron MGP_129S1SvImJ_T0001077.1 MGP_129S1SvImJ_G0001006.1 mouse_genomes_project 2 12608222 12610983 + TEC TEC MGP_129S1SvImJ_T0058685.1 MGP_129S1SvImJ_G0026756.1 mouse_genomes_project 2 160929575 160971262 - MGP_129S1SvImJ_P0058685 Gm28036 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058686.1 MGP_129S1SvImJ_G0026756.1 mouse_genomes_project 2 160929575 160955839 - MGP_129S1SvImJ_P0058686 Gm28036 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058701.1 MGP_129S1SvImJ_G0026756.1 mouse_genomes_project 2 160936660 160986322 - MGP_129S1SvImJ_P0058701 Gm28036 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058702.1 MGP_129S1SvImJ_G0026756.1 mouse_genomes_project 2 160936660 160986322 - MGP_129S1SvImJ_P0058702 Gm28036 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058703.1 MGP_129S1SvImJ_G0026756.1 mouse_genomes_project 2 160936660 160986322 - MGP_129S1SvImJ_P0058703 Gm28036 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058704.1 MGP_129S1SvImJ_G0026756.1 mouse_genomes_project 2 160936822 160971287 - MGP_129S1SvImJ_P0058704 Gm28036 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058705.1 MGP_129S1SvImJ_G0026756.1 mouse_genomes_project 2 160936828 160954682 - MGP_129S1SvImJ_P0058705 Gm28036 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058706.1 MGP_129S1SvImJ_G0026756.1 mouse_genomes_project 2 160937155 160971292 - MGP_129S1SvImJ_P0058706 Gm28036 protein_coding protein_coding MGP_129S1SvImJ_T0007220.1 MGP_129S1SvImJ_G0005923.1 mouse_genomes_project 2 62137119 62140843 - Gm13564 lincRNA lincRNA MGP_129S1SvImJ_T0057984.1 MGP_129S1SvImJ_G0026572.1 mouse_genomes_project 2 144594244 144614780 - Flrt3 protein_coding processed_transcript MGP_129S1SvImJ_T0057985.1 MGP_129S1SvImJ_G0026572.1 mouse_genomes_project 2 144601528 144614799 - MGP_129S1SvImJ_P0057985 Flrt3 protein_coding protein_coding MGP_129S1SvImJ_T0057986.1 MGP_129S1SvImJ_G0026572.1 mouse_genomes_project 2 144602656 144614730 - MGP_129S1SvImJ_P0057986 Flrt3 protein_coding protein_coding MGP_129S1SvImJ_T0013836.1 MGP_129S1SvImJ_G0011925.1 mouse_genomes_project 2 157017112 157017420 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054491.1 MGP_129S1SvImJ_G0025675.1 mouse_genomes_project 2 35491678 35492620 - MGP_129S1SvImJ_P0054491 Olfr3 protein_coding protein_coding MGP_129S1SvImJ_T0055383.1 MGP_129S1SvImJ_G0025846.1 mouse_genomes_project 2 74989213 74991905 + MGP_129S1SvImJ_P0055383 Hoxd12 protein_coding protein_coding MGP_129S1SvImJ_T0059073.1 MGP_129S1SvImJ_G0026828.1 mouse_genomes_project 2 169014399 169086247 + Pkig protein_coding retained_intron MGP_129S1SvImJ_T0059074.1 MGP_129S1SvImJ_G0026828.1 mouse_genomes_project 2 169014399 169088647 + MGP_129S1SvImJ_P0059074 Pkig protein_coding protein_coding MGP_129S1SvImJ_T0059075.1 MGP_129S1SvImJ_G0026828.1 mouse_genomes_project 2 169014412 169088643 + MGP_129S1SvImJ_P0059075 Pkig protein_coding protein_coding MGP_129S1SvImJ_T0059076.1 MGP_129S1SvImJ_G0026828.1 mouse_genomes_project 2 169014428 169088177 + MGP_129S1SvImJ_P0059076 Pkig protein_coding protein_coding MGP_129S1SvImJ_T0059077.1 MGP_129S1SvImJ_G0026828.1 mouse_genomes_project 2 169014471 169083511 + MGP_129S1SvImJ_P0059077 Pkig protein_coding protein_coding MGP_129S1SvImJ_T0059078.1 MGP_129S1SvImJ_G0026828.1 mouse_genomes_project 2 169014490 169088280 + MGP_129S1SvImJ_P0059078 Pkig protein_coding protein_coding MGP_129S1SvImJ_T0059079.1 MGP_129S1SvImJ_G0026828.1 mouse_genomes_project 2 169014493 169088007 + MGP_129S1SvImJ_P0059079 Pkig protein_coding protein_coding MGP_129S1SvImJ_T0059080.1 MGP_129S1SvImJ_G0026828.1 mouse_genomes_project 2 169017514 169087962 + MGP_129S1SvImJ_P0059080 Pkig protein_coding protein_coding MGP_129S1SvImJ_T0059081.1 MGP_129S1SvImJ_G0026828.1 mouse_genomes_project 2 169055365 169088641 + MGP_129S1SvImJ_P0059081 Pkig protein_coding protein_coding MGP_129S1SvImJ_T0055844.1 MGP_129S1SvImJ_G0026040.1 mouse_genomes_project 2 89081357 89082323 + MGP_129S1SvImJ_P0055844 Olfr1161 protein_coding protein_coding MGP_129S1SvImJ_T0059955.1 MGP_129S1SvImJ_G0027035.1 mouse_genomes_project 2 188319528 188321190 - MGP_129S1SvImJ_P0059955 Lkaaear1 protein_coding protein_coding MGP_129S1SvImJ_T0059956.1 MGP_129S1SvImJ_G0027035.1 mouse_genomes_project 2 188319531 188320152 - MGP_129S1SvImJ_P0059956 Lkaaear1 protein_coding protein_coding MGP_129S1SvImJ_T0058617.1 MGP_129S1SvImJ_G0026746.1 mouse_genomes_project 2 160676155 160683432 - MGP_129S1SvImJ_P0058617 Fam83c protein_coding protein_coding MGP_129S1SvImJ_T0013682.1 MGP_129S1SvImJ_G0011771.1 mouse_genomes_project 2 95460190 95460770 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055926.1 MGP_129S1SvImJ_G0026109.1 mouse_genomes_project 2 90949605 90950562 - MGP_129S1SvImJ_P0055926 Olfr1253 protein_coding protein_coding MGP_129S1SvImJ_T0102418.1 MGP_129S1SvImJ_G0040252.1 mouse_genomes_project 2 88871824 88872137 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0055712.1 MGP_129S1SvImJ_G0025923.1 mouse_genomes_project 2 85873179 85907366 - MGP_129S1SvImJ_P0055712 Lrrc55 protein_coding protein_coding MGP_129S1SvImJ_T0055713.1 MGP_129S1SvImJ_G0025923.1 mouse_genomes_project 2 85898737 85907366 - MGP_129S1SvImJ_P0055713 Lrrc55 protein_coding protein_coding MGP_129S1SvImJ_T0056281.1 MGP_129S1SvImJ_G0026176.1 mouse_genomes_project 2 95071255 95075049 + MGP_129S1SvImJ_P0056281 Gm10803 protein_coding protein_coding MGP_129S1SvImJ_T0052555.1 MGP_129S1SvImJ_G0025346.1 mouse_genomes_project 2 9062672 9113767 + MGP_129S1SvImJ_P0052555 Il2ra protein_coding protein_coding MGP_129S1SvImJ_T0052556.1 MGP_129S1SvImJ_G0025346.1 mouse_genomes_project 2 9062714 9068622 + MGP_129S1SvImJ_P0052556 Il2ra protein_coding protein_coding MGP_129S1SvImJ_T0052557.1 MGP_129S1SvImJ_G0025346.1 mouse_genomes_project 2 9100464 9100966 + Il2ra protein_coding retained_intron MGP_129S1SvImJ_T0007205.1 MGP_129S1SvImJ_G0005910.1 mouse_genomes_project 2 49788740 49793085 + Gm13485 lincRNA lincRNA MGP_129S1SvImJ_T0004084.1 MGP_129S1SvImJ_G0003621.1 mouse_genomes_project 2 121450393 121453436 + Inafm2 antisense antisense MGP_129S1SvImJ_T0017771.1 MGP_129S1SvImJ_G0015398.1 mouse_genomes_project 2 17193240 17194564 + 1810010K12Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017772.1 MGP_129S1SvImJ_G0015398.1 mouse_genomes_project 2 17193882 17196408 + 1810010K12Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0059671.1 MGP_129S1SvImJ_G0026984.1 mouse_genomes_project 2 186539619 186567219 + MGP_129S1SvImJ_P0059671 Ss18l1 protein_coding protein_coding MGP_129S1SvImJ_T0057967.1 MGP_129S1SvImJ_G0026569.1 mouse_genomes_project 2 144098470 144132243 + MGP_129S1SvImJ_P0057967 Ndufaf5 protein_coding protein_coding MGP_129S1SvImJ_T0057968.1 MGP_129S1SvImJ_G0026569.1 mouse_genomes_project 2 144098534 144100136 + Ndufaf5 protein_coding retained_intron MGP_129S1SvImJ_T0057969.1 MGP_129S1SvImJ_G0026569.1 mouse_genomes_project 2 144098851 144132186 + Ndufaf5 protein_coding processed_transcript MGP_129S1SvImJ_T0056718.1 MGP_129S1SvImJ_G0026301.1 mouse_genomes_project 2 116523373 116528975 - MGP_129S1SvImJ_P0056718 Actc1 protein_coding protein_coding MGP_129S1SvImJ_T0056719.1 MGP_129S1SvImJ_G0026301.1 mouse_genomes_project 2 116527992 116529636 - MGP_129S1SvImJ_P0056719 Actc1 protein_coding protein_coding MGP_129S1SvImJ_T0013789.1 MGP_129S1SvImJ_G0011878.1 mouse_genomes_project 2 140190088 140190730 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100950.1 MGP_129S1SvImJ_G0039017.1 mouse_genomes_project 2 81449793 81449924 + Gm22652 snoRNA snoRNA MGP_129S1SvImJ_T0003990.1 MGP_129S1SvImJ_G0003561.1 mouse_genomes_project 2 44188547 44192474 + Zeb2os antisense antisense MGP_129S1SvImJ_T0003991.1 MGP_129S1SvImJ_G0003561.1 mouse_genomes_project 2 44189644 44192474 + Zeb2os antisense antisense MGP_129S1SvImJ_T0013471.1 MGP_129S1SvImJ_G0011560.1 mouse_genomes_project 2 21273577 21274025 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017761.1 MGP_129S1SvImJ_G0015392.1 mouse_genomes_project 2 7689763 7729086 - Gm13261 processed_transcript processed_transcript MGP_129S1SvImJ_T0054222.1 MGP_129S1SvImJ_G0025623.1 mouse_genomes_project 2 31269274 31271086 + MGP_129S1SvImJ_P0054222 Ptrh1 protein_coding protein_coding MGP_129S1SvImJ_T0054223.1 MGP_129S1SvImJ_G0025623.1 mouse_genomes_project 2 31269304 31270244 + Ptrh1 protein_coding processed_transcript MGP_129S1SvImJ_T0054224.1 MGP_129S1SvImJ_G0025623.1 mouse_genomes_project 2 31269353 31270938 + Ptrh1 protein_coding retained_intron MGP_129S1SvImJ_T0010504.1 MGP_129S1SvImJ_G0008620.1 mouse_genomes_project 2 186686124 186686193 - Mir7005 miRNA miRNA MGP_129S1SvImJ_T0007353.1 MGP_129S1SvImJ_G0006031.1 mouse_genomes_project 2 150739177 150742355 + 4933406D12Rik lincRNA lincRNA MGP_129S1SvImJ_T0013825.1 MGP_129S1SvImJ_G0011914.1 mouse_genomes_project 2 152761610 152761845 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102422.1 MGP_129S1SvImJ_G0040256.1 mouse_genomes_project 2 88919357 88920294 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0013424.1 MGP_129S1SvImJ_G0011513.1 mouse_genomes_project 2 2260455 2261280 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099663.1 MGP_129S1SvImJ_G0037730.1 mouse_genomes_project 2 25532949 25533075 - Gm25541 snRNA snRNA MGP_129S1SvImJ_T0055877.1 MGP_129S1SvImJ_G0026071.1 mouse_genomes_project 2 90088574 90089507 - MGP_129S1SvImJ_P0055877 Olfr1209 protein_coding protein_coding MGP_129S1SvImJ_T0052751.1 MGP_129S1SvImJ_G0025375.1 mouse_genomes_project 2 16386605 16390802 + MGP_129S1SvImJ_P0052751 Commd3 protein_coding protein_coding MGP_129S1SvImJ_T0052752.1 MGP_129S1SvImJ_G0025375.1 mouse_genomes_project 2 16386644 16390803 + MGP_129S1SvImJ_P0052752 Commd3 protein_coding protein_coding MGP_129S1SvImJ_T0052753.1 MGP_129S1SvImJ_G0025375.1 mouse_genomes_project 2 16386654 16389264 + Commd3 protein_coding processed_transcript MGP_129S1SvImJ_T0052754.1 MGP_129S1SvImJ_G0025375.1 mouse_genomes_project 2 16386656 16389207 + Commd3 protein_coding processed_transcript MGP_129S1SvImJ_T0052755.1 MGP_129S1SvImJ_G0025375.1 mouse_genomes_project 2 16386657 16389084 + Commd3 protein_coding processed_transcript MGP_129S1SvImJ_T0052756.1 MGP_129S1SvImJ_G0025375.1 mouse_genomes_project 2 16386744 16388972 + Commd3 protein_coding processed_transcript MGP_129S1SvImJ_T0052757.1 MGP_129S1SvImJ_G0025375.1 mouse_genomes_project 2 16388229 16388969 + Commd3 protein_coding processed_transcript MGP_129S1SvImJ_T0052758.1 MGP_129S1SvImJ_G0025375.1 mouse_genomes_project 2 16388532 16390500 + Commd3 protein_coding processed_transcript MGP_129S1SvImJ_T0052759.1 MGP_129S1SvImJ_G0025375.1 mouse_genomes_project 2 16388656 16390553 + Commd3 protein_coding processed_transcript MGP_129S1SvImJ_T0052760.1 MGP_129S1SvImJ_G0025375.1 mouse_genomes_project 2 16388918 16390495 + Commd3 protein_coding processed_transcript MGP_129S1SvImJ_T0052761.1 MGP_129S1SvImJ_G0025375.1 mouse_genomes_project 2 16388995 16389578 + Commd3 protein_coding processed_transcript MGP_129S1SvImJ_T0052762.1 MGP_129S1SvImJ_G0025375.1 mouse_genomes_project 2 16389220 16390073 + Commd3 protein_coding processed_transcript MGP_129S1SvImJ_T0007415.1 MGP_129S1SvImJ_G0006084.1 mouse_genomes_project 2 174922361 174923000 + 1700017J07Rik lincRNA lincRNA MGP_129S1SvImJ_T0052905.1 MGP_129S1SvImJ_G0025407.1 mouse_genomes_project 2 22085754 22088391 + MGP_129S1SvImJ_P0052905 Il1f10 protein_coding protein_coding MGP_129S1SvImJ_T0053085.1 MGP_129S1SvImJ_G0025438.1 mouse_genomes_project 2 23159051 23189963 - MGP_129S1SvImJ_P0053085 Grin1 protein_coding protein_coding MGP_129S1SvImJ_T0053086.1 MGP_129S1SvImJ_G0025438.1 mouse_genomes_project 2 23159051 23189896 - MGP_129S1SvImJ_P0053086 Grin1 protein_coding protein_coding MGP_129S1SvImJ_T0053087.1 MGP_129S1SvImJ_G0025438.1 mouse_genomes_project 2 23159051 23189871 - MGP_129S1SvImJ_P0053087 Grin1 protein_coding protein_coding MGP_129S1SvImJ_T0053088.1 MGP_129S1SvImJ_G0025438.1 mouse_genomes_project 2 23159051 23189871 - MGP_129S1SvImJ_P0053088 Grin1 protein_coding protein_coding MGP_129S1SvImJ_T0053089.1 MGP_129S1SvImJ_G0025438.1 mouse_genomes_project 2 23159051 23189896 - MGP_129S1SvImJ_P0053089 Grin1 protein_coding protein_coding MGP_129S1SvImJ_T0053090.1 MGP_129S1SvImJ_G0025438.1 mouse_genomes_project 2 23159051 23189896 - MGP_129S1SvImJ_P0053090 Grin1 protein_coding protein_coding MGP_129S1SvImJ_T0053091.1 MGP_129S1SvImJ_G0025438.1 mouse_genomes_project 2 23159051 23189871 - MGP_129S1SvImJ_P0053091 Grin1 protein_coding protein_coding MGP_129S1SvImJ_T0053092.1 MGP_129S1SvImJ_G0025438.1 mouse_genomes_project 2 23159051 23189871 - MGP_129S1SvImJ_P0053092 Grin1 protein_coding protein_coding MGP_129S1SvImJ_T0053093.1 MGP_129S1SvImJ_G0025438.1 mouse_genomes_project 2 23159227 23173140 - Grin1 protein_coding processed_transcript MGP_129S1SvImJ_T0053094.1 MGP_129S1SvImJ_G0025438.1 mouse_genomes_project 2 23159928 23164550 - Grin1 protein_coding processed_transcript MGP_129S1SvImJ_T0053095.1 MGP_129S1SvImJ_G0025438.1 mouse_genomes_project 2 23172835 23175876 - Grin1 protein_coding processed_transcript MGP_129S1SvImJ_T0053096.1 MGP_129S1SvImJ_G0025438.1 mouse_genomes_project 2 23172938 23176173 - Grin1 protein_coding processed_transcript MGP_129S1SvImJ_T0053097.1 MGP_129S1SvImJ_G0025438.1 mouse_genomes_project 2 23181576 23189902 - Grin1 protein_coding processed_transcript MGP_129S1SvImJ_T0053098.1 MGP_129S1SvImJ_G0025438.1 mouse_genomes_project 2 23185176 23189939 - Grin1 protein_coding processed_transcript MGP_129S1SvImJ_T0013786.1 MGP_129S1SvImJ_G0011875.1 mouse_genomes_project 2 136692686 136693052 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099656.1 MGP_129S1SvImJ_G0037723.1 mouse_genomes_project 2 8467743 8467876 - Gm26478 snRNA snRNA MGP_129S1SvImJ_T0058148.1 MGP_129S1SvImJ_G0026613.1 mouse_genomes_project 2 153116464 153119344 - MGP_129S1SvImJ_P0058148 Cst11 protein_coding protein_coding MGP_129S1SvImJ_T0052509.1 MGP_129S1SvImJ_G0025339.1 mouse_genomes_project 2 7447219 7484110 - MGP_129S1SvImJ_P0052509 Itih2 protein_coding protein_coding MGP_129S1SvImJ_T0052510.1 MGP_129S1SvImJ_G0025339.1 mouse_genomes_project 2 7462919 7484522 - MGP_129S1SvImJ_P0052510 Itih2 protein_coding protein_coding MGP_129S1SvImJ_T0052511.1 MGP_129S1SvImJ_G0025339.1 mouse_genomes_project 2 7479727 7484843 - MGP_129S1SvImJ_P0052511 Itih2 protein_coding protein_coding MGP_129S1SvImJ_T0013860.1 MGP_129S1SvImJ_G0011949.1 mouse_genomes_project 2 163479050 163479339 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059167.1 MGP_129S1SvImJ_G0026865.1 mouse_genomes_project 2 170145079 170157288 - MGP_129S1SvImJ_P0059167 Wfdc11 protein_coding protein_coding MGP_129S1SvImJ_T0059168.1 MGP_129S1SvImJ_G0026865.1 mouse_genomes_project 2 170145222 170147754 - MGP_129S1SvImJ_P0059168 Wfdc11 protein_coding protein_coding MGP_129S1SvImJ_T0003984.1 MGP_129S1SvImJ_G0003556.1 mouse_genomes_project 2 37106142 37110543 - Gm13584 antisense antisense MGP_129S1SvImJ_T0055742.1 MGP_129S1SvImJ_G0025950.1 mouse_genomes_project 2 86794220 86795153 + MGP_129S1SvImJ_P0055742 Olfr1032 protein_coding protein_coding MGP_129S1SvImJ_T0099679.1 MGP_129S1SvImJ_G0037746.1 mouse_genomes_project 2 76053178 76053277 - Gm24996 snRNA snRNA MGP_129S1SvImJ_T0007269.1 MGP_129S1SvImJ_G0005965.1 mouse_genomes_project 2 94194977 94214825 + Gm13816 lincRNA lincRNA MGP_129S1SvImJ_T0013558.1 MGP_129S1SvImJ_G0011647.1 mouse_genomes_project 2 55492329 55492562 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054547.1 MGP_129S1SvImJ_G0025699.1 mouse_genomes_project 2 36494274 36518341 + MGP_129S1SvImJ_P0054547 Crb2 protein_coding protein_coding MGP_129S1SvImJ_T0054548.1 MGP_129S1SvImJ_G0025699.1 mouse_genomes_project 2 36509221 36511574 + MGP_129S1SvImJ_P0054548 Crb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054549.1 MGP_129S1SvImJ_G0025699.1 mouse_genomes_project 2 36514403 36515854 + Crb2 protein_coding processed_transcript MGP_129S1SvImJ_T0004092.1 MGP_129S1SvImJ_G0003629.1 mouse_genomes_project 2 128449267 128451856 + A530010F05Rik antisense antisense MGP_129S1SvImJ_T0004028.1 MGP_129S1SvImJ_G0003586.1 mouse_genomes_project 2 73629485 73639278 + Gm13703 antisense antisense MGP_129S1SvImJ_T0013662.1 MGP_129S1SvImJ_G0011751.1 mouse_genomes_project 2 88569702 88570171 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055386.1 MGP_129S1SvImJ_G0025848.1 mouse_genomes_project 2 75006127 75009281 + MGP_129S1SvImJ_P0055386 Hoxd10 protein_coding protein_coding MGP_129S1SvImJ_T0057317.1 MGP_129S1SvImJ_G0026420.1 mouse_genomes_project 2 125782616 125796195 + MGP_129S1SvImJ_P0057317 Bloc1s6 protein_coding protein_coding MGP_129S1SvImJ_T0057318.1 MGP_129S1SvImJ_G0026420.1 mouse_genomes_project 2 125782626 125792697 + Bloc1s6 protein_coding processed_transcript MGP_129S1SvImJ_T0057319.1 MGP_129S1SvImJ_G0026420.1 mouse_genomes_project 2 125782632 125794818 + Bloc1s6 protein_coding processed_transcript MGP_129S1SvImJ_T0057320.1 MGP_129S1SvImJ_G0026420.1 mouse_genomes_project 2 125782640 125783270 + Bloc1s6 protein_coding processed_transcript MGP_129S1SvImJ_T0057321.1 MGP_129S1SvImJ_G0026420.1 mouse_genomes_project 2 125782643 125792763 + Bloc1s6 protein_coding processed_transcript MGP_129S1SvImJ_T0057322.1 MGP_129S1SvImJ_G0026420.1 mouse_genomes_project 2 125782672 125793723 + Bloc1s6 protein_coding processed_transcript MGP_129S1SvImJ_T0010411.1 MGP_129S1SvImJ_G0008527.1 mouse_genomes_project 2 28990239 28990323 + Mir3089 miRNA miRNA MGP_129S1SvImJ_T0055726.1 MGP_129S1SvImJ_G0025935.1 mouse_genomes_project 2 86534443 86535379 - MGP_129S1SvImJ_P0055726 Olfr1012 protein_coding protein_coding MGP_129S1SvImJ_T0056620.1 MGP_129S1SvImJ_G0026244.1 mouse_genomes_project 2 112611622 112656143 - MGP_129S1SvImJ_P0056620 Bbox1 protein_coding protein_coding MGP_129S1SvImJ_T0056621.1 MGP_129S1SvImJ_G0026244.1 mouse_genomes_project 2 112643258 112664638 - MGP_129S1SvImJ_P0056621 Bbox1 protein_coding protein_coding MGP_129S1SvImJ_T0100919.1 MGP_129S1SvImJ_G0038986.1 mouse_genomes_project 2 24610404 24610543 - Snhg7 snoRNA snoRNA MGP_129S1SvImJ_T0055820.1 MGP_129S1SvImJ_G0026018.1 mouse_genomes_project 2 88710151 88729709 - MGP_129S1SvImJ_P0055820 protein_coding protein_coding MGP_129S1SvImJ_T0011535.1 MGP_129S1SvImJ_G0009651.1 mouse_genomes_project 2 146368013 146368317 + Gm23179 misc_RNA misc_RNA MGP_129S1SvImJ_T0053069.1 MGP_129S1SvImJ_G0025432.1 mouse_genomes_project 2 23123236 23124090 + MGP_129S1SvImJ_P0053069 Tmem203 protein_coding protein_coding MGP_129S1SvImJ_T0052322.1 MGP_129S1SvImJ_G0025308.1 mouse_genomes_project 2 395069 446306 + MGP_129S1SvImJ_P0052322 Dclre1c protein_coding protein_coding MGP_129S1SvImJ_T0052323.1 MGP_129S1SvImJ_G0025308.1 mouse_genomes_project 2 395069 442540 + MGP_129S1SvImJ_P0052323 Dclre1c protein_coding protein_coding MGP_129S1SvImJ_T0052324.1 MGP_129S1SvImJ_G0025308.1 mouse_genomes_project 2 395088 408781 + Dclre1c protein_coding processed_transcript MGP_129S1SvImJ_T0052325.1 MGP_129S1SvImJ_G0025308.1 mouse_genomes_project 2 395088 435484 + MGP_129S1SvImJ_P0052325 Dclre1c protein_coding protein_coding MGP_129S1SvImJ_T0052326.1 MGP_129S1SvImJ_G0025308.1 mouse_genomes_project 2 395103 408819 + Dclre1c protein_coding processed_transcript MGP_129S1SvImJ_T0052327.1 MGP_129S1SvImJ_G0025308.1 mouse_genomes_project 2 395103 442532 + MGP_129S1SvImJ_P0052327 Dclre1c protein_coding protein_coding MGP_129S1SvImJ_T0052328.1 MGP_129S1SvImJ_G0025308.1 mouse_genomes_project 2 395140 423649 + Dclre1c protein_coding retained_intron MGP_129S1SvImJ_T0052329.1 MGP_129S1SvImJ_G0025308.1 mouse_genomes_project 2 422271 440350 + MGP_129S1SvImJ_P0052329 Dclre1c protein_coding protein_coding MGP_129S1SvImJ_T0052330.1 MGP_129S1SvImJ_G0025308.1 mouse_genomes_project 2 434340 435259 + Dclre1c protein_coding processed_transcript MGP_129S1SvImJ_T0007157.1 MGP_129S1SvImJ_G0005874.1 mouse_genomes_project 2 18905674 18929161 + Gm13376 lincRNA lincRNA MGP_129S1SvImJ_T0007420.1 MGP_129S1SvImJ_G0006088.1 mouse_genomes_project 2 175205111 175207865 + 9430093N23Rik lincRNA lincRNA MGP_129S1SvImJ_T0100925.1 MGP_129S1SvImJ_G0038992.1 mouse_genomes_project 2 29506422 29506546 + Gm22516 snoRNA snoRNA MGP_129S1SvImJ_T0056922.1 MGP_129S1SvImJ_G0026351.1 mouse_genomes_project 2 122581766 122590620 - MGP_129S1SvImJ_P0056922 Ltk protein_coding protein_coding MGP_129S1SvImJ_T0056923.1 MGP_129S1SvImJ_G0026351.1 mouse_genomes_project 2 122581768 122588928 - Ltk protein_coding retained_intron MGP_129S1SvImJ_T0056924.1 MGP_129S1SvImJ_G0026351.1 mouse_genomes_project 2 122581768 122590654 - MGP_129S1SvImJ_P0056924 Ltk protein_coding protein_coding MGP_129S1SvImJ_T0056925.1 MGP_129S1SvImJ_G0026351.1 mouse_genomes_project 2 122581772 122590756 - MGP_129S1SvImJ_P0056925 Ltk protein_coding protein_coding MGP_129S1SvImJ_T0056926.1 MGP_129S1SvImJ_G0026351.1 mouse_genomes_project 2 122581774 122588932 - MGP_129S1SvImJ_P0056926 Ltk protein_coding protein_coding MGP_129S1SvImJ_T0056927.1 MGP_129S1SvImJ_G0026351.1 mouse_genomes_project 2 122581776 122588926 - Ltk protein_coding retained_intron MGP_129S1SvImJ_T0007325.1 MGP_129S1SvImJ_G0006007.1 mouse_genomes_project 2 127264401 127270711 - 4930517E11Rik lincRNA lincRNA MGP_129S1SvImJ_T0007319.1 MGP_129S1SvImJ_G0006003.1 mouse_genomes_project 2 120797928 120798525 - Gm29233 lincRNA lincRNA MGP_129S1SvImJ_T0054414.1 MGP_129S1SvImJ_G0025651.1 mouse_genomes_project 2 33886861 33939438 + MGP_129S1SvImJ_P0054414 Gsn protein_coding protein_coding MGP_129S1SvImJ_T0054415.1 MGP_129S1SvImJ_G0025651.1 mouse_genomes_project 2 33886865 33934799 + MGP_129S1SvImJ_P0054415 Gsn protein_coding protein_coding MGP_129S1SvImJ_T0054416.1 MGP_129S1SvImJ_G0025651.1 mouse_genomes_project 2 33886877 33925117 + MGP_129S1SvImJ_P0054416 Gsn protein_coding protein_coding MGP_129S1SvImJ_T0054417.1 MGP_129S1SvImJ_G0025651.1 mouse_genomes_project 2 33886890 33925115 + MGP_129S1SvImJ_P0054417 Gsn protein_coding protein_coding MGP_129S1SvImJ_T0054418.1 MGP_129S1SvImJ_G0025651.1 mouse_genomes_project 2 33886930 33921995 + MGP_129S1SvImJ_P0054418 Gsn protein_coding protein_coding MGP_129S1SvImJ_T0054419.1 MGP_129S1SvImJ_G0025651.1 mouse_genomes_project 2 33913927 33939440 + MGP_129S1SvImJ_P0054419 Gsn protein_coding protein_coding MGP_129S1SvImJ_T0054420.1 MGP_129S1SvImJ_G0025651.1 mouse_genomes_project 2 33914060 33916573 + Gsn protein_coding retained_intron MGP_129S1SvImJ_T0059103.1 MGP_129S1SvImJ_G0026837.1 mouse_genomes_project 2 169555560 169563047 - MGP_129S1SvImJ_P0059103 Kcns1 protein_coding protein_coding MGP_129S1SvImJ_T0058525.1 MGP_129S1SvImJ_G0026728.1 mouse_genomes_project 2 159857002 159873549 - MGP_129S1SvImJ_P0058525 Gm4737 protein_coding protein_coding MGP_129S1SvImJ_T0058526.1 MGP_129S1SvImJ_G0026728.1 mouse_genomes_project 2 159858141 159873444 - MGP_129S1SvImJ_P0058526 Gm4737 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0058527.1 MGP_129S1SvImJ_G0026728.1 mouse_genomes_project 2 159864857 159873499 - MGP_129S1SvImJ_P0058527 Gm4737 protein_coding protein_coding MGP_129S1SvImJ_T0058528.1 MGP_129S1SvImJ_G0026728.1 mouse_genomes_project 2 159867651 159873499 - Gm4737 protein_coding retained_intron MGP_129S1SvImJ_T0058637.1 MGP_129S1SvImJ_G0026748.1 mouse_genomes_project 2 160794806 160796828 + MGP_129S1SvImJ_P0058637 Gm15557 protein_coding protein_coding MGP_129S1SvImJ_T0054024.1 MGP_129S1SvImJ_G0025595.1 mouse_genomes_project 2 30454404 30496355 - MGP_129S1SvImJ_P0054024 Fam78a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054027.1 MGP_129S1SvImJ_G0025595.1 mouse_genomes_project 2 30477241 30495455 - MGP_129S1SvImJ_P0054027 Fam78a protein_coding protein_coding MGP_129S1SvImJ_T0054028.1 MGP_129S1SvImJ_G0025595.1 mouse_genomes_project 2 30479794 30491024 - Fam78a protein_coding processed_transcript MGP_129S1SvImJ_T0054029.1 MGP_129S1SvImJ_G0025595.1 mouse_genomes_project 2 30494943 30496543 - Fam78a protein_coding processed_transcript MGP_129S1SvImJ_T0055484.1 MGP_129S1SvImJ_G0025873.1 mouse_genomes_project 2 77852033 78176512 - MGP_129S1SvImJ_P0055484 Zfp385b protein_coding protein_coding MGP_129S1SvImJ_T0055485.1 MGP_129S1SvImJ_G0025873.1 mouse_genomes_project 2 77852033 77970970 - MGP_129S1SvImJ_P0055485 Zfp385b protein_coding protein_coding MGP_129S1SvImJ_T0055486.1 MGP_129S1SvImJ_G0025873.1 mouse_genomes_project 2 77852033 78157753 - MGP_129S1SvImJ_P0055486 Zfp385b protein_coding protein_coding MGP_129S1SvImJ_T0055487.1 MGP_129S1SvImJ_G0025873.1 mouse_genomes_project 2 77852500 78280289 - MGP_129S1SvImJ_P0055487 Zfp385b protein_coding protein_coding MGP_129S1SvImJ_T0055488.1 MGP_129S1SvImJ_G0025873.1 mouse_genomes_project 2 77857312 77970966 - Zfp385b protein_coding processed_transcript MGP_129S1SvImJ_T0055489.1 MGP_129S1SvImJ_G0025873.1 mouse_genomes_project 2 77892450 78157753 - Zfp385b protein_coding processed_transcript MGP_129S1SvImJ_T0055490.1 MGP_129S1SvImJ_G0025873.1 mouse_genomes_project 2 77917443 77970887 - Zfp385b protein_coding processed_transcript MGP_129S1SvImJ_T0055491.1 MGP_129S1SvImJ_G0025873.1 mouse_genomes_project 2 77952015 78157860 - Zfp385b protein_coding processed_transcript MGP_129S1SvImJ_T0055492.1 MGP_129S1SvImJ_G0025873.1 mouse_genomes_project 2 77978601 78280732 - MGP_129S1SvImJ_P0055492 Zfp385b protein_coding protein_coding MGP_129S1SvImJ_T0055493.1 MGP_129S1SvImJ_G0025873.1 mouse_genomes_project 2 77979352 78012870 - Zfp385b protein_coding processed_transcript MGP_129S1SvImJ_T0055494.1 MGP_129S1SvImJ_G0025873.1 mouse_genomes_project 2 78280709 78283108 - Zfp385b protein_coding processed_transcript MGP_129S1SvImJ_T0057398.1 MGP_129S1SvImJ_G0026438.1 mouse_genomes_project 2 129355923 129368922 + MGP_129S1SvImJ_P0057398 Dtwd1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0013816.1 MGP_129S1SvImJ_G0011905.1 mouse_genomes_project 2 150488320 150490268 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057686.1 MGP_129S1SvImJ_G0026507.1 mouse_genomes_project 2 134027791 134029487 + Mrps26 protein_coding retained_intron MGP_129S1SvImJ_T0057687.1 MGP_129S1SvImJ_G0026507.1 mouse_genomes_project 2 134027791 134033743 + MGP_129S1SvImJ_P0057687 Mrps26 protein_coding protein_coding MGP_129S1SvImJ_T0052787.1 MGP_129S1SvImJ_G0025384.1 mouse_genomes_project 2 17411050 17413882 + MGP_129S1SvImJ_P0052787 Otud1 protein_coding protein_coding MGP_129S1SvImJ_T0013612.1 MGP_129S1SvImJ_G0011701.1 mouse_genomes_project 2 74268845 74269846 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057489.1 MGP_129S1SvImJ_G0026457.1 mouse_genomes_project 2 130629248 130648257 + MGP_129S1SvImJ_P0057489 Astl protein_coding protein_coding MGP_129S1SvImJ_T0057490.1 MGP_129S1SvImJ_G0026457.1 mouse_genomes_project 2 130632249 130648256 + MGP_129S1SvImJ_P0057490 Astl protein_coding protein_coding MGP_129S1SvImJ_T0057491.1 MGP_129S1SvImJ_G0026457.1 mouse_genomes_project 2 130632263 130648255 + MGP_129S1SvImJ_P0057491 Astl protein_coding protein_coding MGP_129S1SvImJ_T0057492.1 MGP_129S1SvImJ_G0026457.1 mouse_genomes_project 2 130632537 130640782 + MGP_129S1SvImJ_P0057492 Astl protein_coding protein_coding MGP_129S1SvImJ_T0004102.1 MGP_129S1SvImJ_G0003636.1 mouse_genomes_project 2 132761684 132767532 + Il1bos antisense antisense MGP_129S1SvImJ_T0004103.1 MGP_129S1SvImJ_G0003636.1 mouse_genomes_project 2 132761689 132767517 + Il1bos antisense antisense MGP_129S1SvImJ_T0004104.1 MGP_129S1SvImJ_G0003636.1 mouse_genomes_project 2 132764912 132766861 + Il1bos antisense antisense MGP_129S1SvImJ_T0004037.1 MGP_129S1SvImJ_G0003593.1 mouse_genomes_project 2 75010939 75011762 - Gm28793 antisense antisense MGP_129S1SvImJ_T0017776.1 MGP_129S1SvImJ_G0015400.1 mouse_genomes_project 2 23708802 23719435 - Gm13538 processed_transcript processed_transcript MGP_129S1SvImJ_T0055419.1 MGP_129S1SvImJ_G0025861.1 mouse_genomes_project 2 76366880 76371678 - MGP_129S1SvImJ_P0055419 protein_coding protein_coding MGP_129S1SvImJ_T0055846.1 MGP_129S1SvImJ_G0026042.1 mouse_genomes_project 2 89105725 89106670 - MGP_129S1SvImJ_P0055846 Olfr1162 protein_coding protein_coding MGP_129S1SvImJ_T0055847.1 MGP_129S1SvImJ_G0026042.1 mouse_genomes_project 2 89105725 89107160 - MGP_129S1SvImJ_P0055847 Olfr1162 protein_coding protein_coding MGP_129S1SvImJ_T0057777.1 MGP_129S1SvImJ_G0026527.1 mouse_genomes_project 2 134721621 134725942 + Ap5s1 protein_coding processed_transcript MGP_129S1SvImJ_T0057778.1 MGP_129S1SvImJ_G0026527.1 mouse_genomes_project 2 134721629 134728150 + MGP_129S1SvImJ_P0057778 Ap5s1 protein_coding protein_coding MGP_129S1SvImJ_T0057779.1 MGP_129S1SvImJ_G0026527.1 mouse_genomes_project 2 134724864 134728416 + Ap5s1 protein_coding processed_transcript MGP_129S1SvImJ_T0057780.1 MGP_129S1SvImJ_G0026527.1 mouse_genomes_project 2 134724891 134728008 + Ap5s1 protein_coding processed_transcript MGP_129S1SvImJ_T0057781.1 MGP_129S1SvImJ_G0026527.1 mouse_genomes_project 2 134724918 134728925 + MGP_129S1SvImJ_P0057781 Ap5s1 protein_coding protein_coding MGP_129S1SvImJ_T0057782.1 MGP_129S1SvImJ_G0026527.1 mouse_genomes_project 2 134724934 134728928 + MGP_129S1SvImJ_P0057782 Ap5s1 protein_coding protein_coding MGP_129S1SvImJ_T0057783.1 MGP_129S1SvImJ_G0026527.1 mouse_genomes_project 2 134724934 134728928 + MGP_129S1SvImJ_P0057783 Ap5s1 protein_coding protein_coding MGP_129S1SvImJ_T0057784.1 MGP_129S1SvImJ_G0026527.1 mouse_genomes_project 2 134725098 134728278 + MGP_129S1SvImJ_P0057784 Ap5s1 protein_coding protein_coding MGP_129S1SvImJ_T0054874.1 MGP_129S1SvImJ_G0025756.1 mouse_genomes_project 2 59155125 59402784 + MGP_129S1SvImJ_P0054874 Tanc1 protein_coding protein_coding MGP_129S1SvImJ_T0054875.1 MGP_129S1SvImJ_G0025756.1 mouse_genomes_project 2 59191783 59402352 + MGP_129S1SvImJ_P0054875 Tanc1 protein_coding protein_coding MGP_129S1SvImJ_T0054876.1 MGP_129S1SvImJ_G0025756.1 mouse_genomes_project 2 59234378 59402360 + MGP_129S1SvImJ_P0054876 Tanc1 protein_coding protein_coding MGP_129S1SvImJ_T0054877.1 MGP_129S1SvImJ_G0025756.1 mouse_genomes_project 2 59260260 59277936 + Tanc1 protein_coding processed_transcript MGP_129S1SvImJ_T0054878.1 MGP_129S1SvImJ_G0025756.1 mouse_genomes_project 2 59297679 59377055 + Tanc1 protein_coding retained_intron MGP_129S1SvImJ_T0054879.1 MGP_129S1SvImJ_G0025756.1 mouse_genomes_project 2 59324214 59327304 + Tanc1 protein_coding processed_transcript MGP_129S1SvImJ_T0054880.1 MGP_129S1SvImJ_G0025756.1 mouse_genomes_project 2 59334353 59340147 + Tanc1 protein_coding processed_transcript MGP_129S1SvImJ_T0054881.1 MGP_129S1SvImJ_G0025756.1 mouse_genomes_project 2 59361716 59365155 + Tanc1 protein_coding retained_intron MGP_129S1SvImJ_T0054882.1 MGP_129S1SvImJ_G0025756.1 mouse_genomes_project 2 59398374 59402350 + Tanc1 protein_coding retained_intron MGP_129S1SvImJ_T0007322.1 MGP_129S1SvImJ_G0006005.1 mouse_genomes_project 2 122390406 122396824 + 1700020I14Rik lincRNA lincRNA MGP_129S1SvImJ_T0007323.1 MGP_129S1SvImJ_G0006005.1 mouse_genomes_project 2 122390412 122405865 + 1700020I14Rik lincRNA lincRNA MGP_129S1SvImJ_T0004148.1 MGP_129S1SvImJ_G0003669.1 mouse_genomes_project 2 157595825 157597440 - Gm14199 antisense antisense MGP_129S1SvImJ_T0013603.1 MGP_129S1SvImJ_G0011692.1 mouse_genomes_project 2 72542788 72543084 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001065.1 MGP_129S1SvImJ_G0000994.1 mouse_genomes_project 2 10647556 10649428 - TEC TEC MGP_129S1SvImJ_T0010394.1 MGP_129S1SvImJ_G0008510.1 mouse_genomes_project 2 20368523 20368591 + Mir3967 miRNA miRNA MGP_129S1SvImJ_T0056997.1 MGP_129S1SvImJ_G0026364.1 mouse_genomes_project 2 123177862 123216021 - MGP_129S1SvImJ_P0056997 Vps39 protein_coding protein_coding MGP_129S1SvImJ_T0056998.1 MGP_129S1SvImJ_G0026364.1 mouse_genomes_project 2 123177862 123216009 - MGP_129S1SvImJ_P0056998 Vps39 protein_coding protein_coding MGP_129S1SvImJ_T0056999.1 MGP_129S1SvImJ_G0026364.1 mouse_genomes_project 2 123178228 123216005 - Vps39 protein_coding processed_transcript MGP_129S1SvImJ_T0057000.1 MGP_129S1SvImJ_G0026364.1 mouse_genomes_project 2 123179445 123180993 - Vps39 protein_coding retained_intron MGP_129S1SvImJ_T0057001.1 MGP_129S1SvImJ_G0026364.1 mouse_genomes_project 2 123181256 123184927 - Vps39 protein_coding retained_intron MGP_129S1SvImJ_T0057002.1 MGP_129S1SvImJ_G0026364.1 mouse_genomes_project 2 123183289 123215993 - Vps39 protein_coding retained_intron MGP_129S1SvImJ_T0057003.1 MGP_129S1SvImJ_G0026364.1 mouse_genomes_project 2 123187293 123194747 - Vps39 protein_coding retained_intron MGP_129S1SvImJ_T0057004.1 MGP_129S1SvImJ_G0026364.1 mouse_genomes_project 2 123199687 123207042 - Vps39 protein_coding processed_transcript MGP_129S1SvImJ_T0057005.1 MGP_129S1SvImJ_G0026364.1 mouse_genomes_project 2 123206088 123216005 - Vps39 protein_coding processed_transcript MGP_129S1SvImJ_T0057006.1 MGP_129S1SvImJ_G0026364.1 mouse_genomes_project 2 123211312 123216009 - Vps39 protein_coding processed_transcript MGP_129S1SvImJ_T0053412.1 MGP_129S1SvImJ_G0025496.1 mouse_genomes_project 2 24811730 24827067 - MGP_129S1SvImJ_P0053412 Abo protein_coding protein_coding MGP_129S1SvImJ_T0053413.1 MGP_129S1SvImJ_G0025496.1 mouse_genomes_project 2 24811730 24836513 - MGP_129S1SvImJ_P0053413 Abo protein_coding protein_coding MGP_129S1SvImJ_T0004052.1 MGP_129S1SvImJ_G0003603.1 mouse_genomes_project 2 91742160 91748009 + 4933423P22Rik antisense antisense MGP_129S1SvImJ_T0004053.1 MGP_129S1SvImJ_G0003603.1 mouse_genomes_project 2 91742174 91751358 + 4933423P22Rik antisense antisense MGP_129S1SvImJ_T0057953.1 MGP_129S1SvImJ_G0026564.1 mouse_genomes_project 2 143380134 143539113 + MGP_129S1SvImJ_P0057953 Sptlc3 protein_coding protein_coding MGP_129S1SvImJ_T0057954.1 MGP_129S1SvImJ_G0026564.1 mouse_genomes_project 2 143380141 143539731 + MGP_129S1SvImJ_P0057954 Sptlc3 protein_coding protein_coding MGP_129S1SvImJ_T0010376.1 MGP_129S1SvImJ_G0008492.1 mouse_genomes_project 2 7868864 7868973 + Mir297b miRNA miRNA MGP_129S1SvImJ_T0007360.1 MGP_129S1SvImJ_G0006036.1 mouse_genomes_project 2 152807726 152818123 + Gm14120 lincRNA lincRNA MGP_129S1SvImJ_T0004085.1 MGP_129S1SvImJ_G0003622.1 mouse_genomes_project 2 121538142 121542296 - Gm14091 antisense antisense MGP_129S1SvImJ_T0102018.1 MGP_129S1SvImJ_G0039869.1 mouse_genomes_project 2 108190677 108228934 + unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0102019.1 MGP_129S1SvImJ_G0039869.1 mouse_genomes_project 2 108226494 108607441 + unitary_pseudogene unitary_pseudogene MGP_129S1SvImJ_T0102020.1 MGP_129S1SvImJ_G0039869.1 mouse_genomes_project 2 108435854 108607441 + unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0102021.1 MGP_129S1SvImJ_G0039869.1 mouse_genomes_project 2 108440304 108555709 + unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0102022.1 MGP_129S1SvImJ_G0039869.1 mouse_genomes_project 2 108605504 108624230 + unitary_pseudogene retained_intron MGP_129S1SvImJ_T0099710.1 MGP_129S1SvImJ_G0037777.1 mouse_genomes_project 2 168088787 168088945 - Gm24478 snRNA snRNA MGP_129S1SvImJ_T0055759.1 MGP_129S1SvImJ_G0025967.1 mouse_genomes_project 2 87191409 87192348 - MGP_129S1SvImJ_P0055759 Olfr1054 protein_coding protein_coding MGP_129S1SvImJ_T0004198.1 MGP_129S1SvImJ_G0003710.1 mouse_genomes_project 2 179359396 179363279 + Ctcflos antisense antisense MGP_129S1SvImJ_T0004199.1 MGP_129S1SvImJ_G0003710.1 mouse_genomes_project 2 179359413 179382913 + Ctcflos antisense antisense MGP_129S1SvImJ_T0004200.1 MGP_129S1SvImJ_G0003710.1 mouse_genomes_project 2 179368241 179379923 + Ctcflos antisense antisense MGP_129S1SvImJ_T0004201.1 MGP_129S1SvImJ_G0003710.1 mouse_genomes_project 2 179375375 179383848 + Ctcflos antisense antisense MGP_129S1SvImJ_T0056897.1 MGP_129S1SvImJ_G0026343.1 mouse_genomes_project 2 122133970 122223904 - MGP_129S1SvImJ_P0056897 Ino80 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0056898.1 MGP_129S1SvImJ_G0026343.1 mouse_genomes_project 2 122162552 122239911 - MGP_129S1SvImJ_P0056898 Ino80 protein_coding protein_coding MGP_129S1SvImJ_T0056899.1 MGP_129S1SvImJ_G0026343.1 mouse_genomes_project 2 122194149 122200365 - Ino80 protein_coding retained_intron MGP_129S1SvImJ_T0055891.1 MGP_129S1SvImJ_G0026083.1 mouse_genomes_project 2 90309511 90310447 - MGP_129S1SvImJ_P0055891 Olfr1222 protein_coding protein_coding MGP_129S1SvImJ_T0055892.1 MGP_129S1SvImJ_G0026083.1 mouse_genomes_project 2 90309796 90310449 - MGP_129S1SvImJ_P0055892 Olfr1222 protein_coding protein_coding MGP_129S1SvImJ_T0053320.1 MGP_129S1SvImJ_G0025483.1 mouse_genomes_project 2 24296384 24300355 - Dnlz protein_coding processed_transcript MGP_129S1SvImJ_T0053321.1 MGP_129S1SvImJ_G0025483.1 mouse_genomes_project 2 24296384 24300365 - MGP_129S1SvImJ_P0053321 Dnlz protein_coding protein_coding MGP_129S1SvImJ_T0057797.1 MGP_129S1SvImJ_G0026530.1 mouse_genomes_project 2 134820088 134877551 - MGP_129S1SvImJ_P0057797 Rnf24 protein_coding protein_coding MGP_129S1SvImJ_T0057798.1 MGP_129S1SvImJ_G0026530.1 mouse_genomes_project 2 134820089 134835738 - MGP_129S1SvImJ_P0057798 Rnf24 protein_coding protein_coding MGP_129S1SvImJ_T0057799.1 MGP_129S1SvImJ_G0026530.1 mouse_genomes_project 2 134820091 134852923 - MGP_129S1SvImJ_P0057799 Rnf24 protein_coding protein_coding MGP_129S1SvImJ_T0057800.1 MGP_129S1SvImJ_G0026530.1 mouse_genomes_project 2 134825521 134877532 - MGP_129S1SvImJ_P0057800 Rnf24 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057801.1 MGP_129S1SvImJ_G0026530.1 mouse_genomes_project 2 134834980 134877562 - Rnf24 protein_coding retained_intron MGP_129S1SvImJ_T0100996.1 MGP_129S1SvImJ_G0039063.1 mouse_genomes_project 2 168023885 168024011 + Gm22936 snoRNA snoRNA MGP_129S1SvImJ_T0013889.1 MGP_129S1SvImJ_G0011978.1 mouse_genomes_project 2 177039858 177040604 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056841.1 MGP_129S1SvImJ_G0026327.1 mouse_genomes_project 2 121645541 121647631 + MGP_129S1SvImJ_P0056841 Chst14 protein_coding protein_coding MGP_129S1SvImJ_T0056842.1 MGP_129S1SvImJ_G0026327.1 mouse_genomes_project 2 121645559 121647625 + MGP_129S1SvImJ_P0056842 Chst14 protein_coding protein_coding MGP_129S1SvImJ_T0059400.1 MGP_129S1SvImJ_G0026911.1 mouse_genomes_project 2 173018187 173070878 - MGP_129S1SvImJ_P0059400 B4galt5 protein_coding protein_coding MGP_129S1SvImJ_T0059401.1 MGP_129S1SvImJ_G0026911.1 mouse_genomes_project 2 173022447 173026924 - MGP_129S1SvImJ_P0059401 B4galt5 protein_coding protein_coding MGP_129S1SvImJ_T0059402.1 MGP_129S1SvImJ_G0026911.1 mouse_genomes_project 2 173028835 173035081 - B4galt5 protein_coding processed_transcript MGP_129S1SvImJ_T0059403.1 MGP_129S1SvImJ_G0026911.1 mouse_genomes_project 2 173028835 173035126 - B4galt5 protein_coding processed_transcript MGP_129S1SvImJ_T0058861.1 MGP_129S1SvImJ_G0026780.1 mouse_genomes_project 2 162325986 162344045 - Ghrh protein_coding processed_transcript MGP_129S1SvImJ_T0058862.1 MGP_129S1SvImJ_G0026780.1 mouse_genomes_project 2 162325986 162343209 - MGP_129S1SvImJ_P0058862 Ghrh protein_coding protein_coding MGP_129S1SvImJ_T0058863.1 MGP_129S1SvImJ_G0026780.1 mouse_genomes_project 2 162325986 162333868 - MGP_129S1SvImJ_P0058863 Ghrh protein_coding protein_coding MGP_129S1SvImJ_T0053734.1 MGP_129S1SvImJ_G0025552.1 mouse_genomes_project 2 28282331 28285773 + MGP_129S1SvImJ_P0053734 Pkn3 protein_coding protein_coding MGP_129S1SvImJ_T0053735.1 MGP_129S1SvImJ_G0025552.1 mouse_genomes_project 2 28282390 28297413 + Pkn3 protein_coding retained_intron MGP_129S1SvImJ_T0053736.1 MGP_129S1SvImJ_G0025552.1 mouse_genomes_project 2 28282860 28284630 + MGP_129S1SvImJ_P0053736 Pkn3 protein_coding protein_coding MGP_129S1SvImJ_T0053737.1 MGP_129S1SvImJ_G0025552.1 mouse_genomes_project 2 28283231 28297419 + MGP_129S1SvImJ_P0053737 Pkn3 protein_coding protein_coding MGP_129S1SvImJ_T0053738.1 MGP_129S1SvImJ_G0025552.1 mouse_genomes_project 2 28283345 28290213 + Pkn3 protein_coding retained_intron MGP_129S1SvImJ_T0053739.1 MGP_129S1SvImJ_G0025552.1 mouse_genomes_project 2 28283401 28297422 + Pkn3 protein_coding retained_intron MGP_129S1SvImJ_T0053740.1 MGP_129S1SvImJ_G0025552.1 mouse_genomes_project 2 28285498 28287869 + Pkn3 protein_coding retained_intron MGP_129S1SvImJ_T0053741.1 MGP_129S1SvImJ_G0025552.1 mouse_genomes_project 2 28289317 28291702 + Pkn3 protein_coding retained_intron MGP_129S1SvImJ_T0013627.1 MGP_129S1SvImJ_G0011716.1 mouse_genomes_project 2 79554051 79554253 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055827.1 MGP_129S1SvImJ_G0026024.1 mouse_genomes_project 2 88813319 88814255 + MGP_129S1SvImJ_P0055827 Olfr1140 protein_coding protein_coding MGP_129S1SvImJ_T0058428.1 MGP_129S1SvImJ_G0026699.1 mouse_genomes_project 2 158563448 158577471 - MGP_129S1SvImJ_P0058428 Sun5 protein_coding protein_coding MGP_129S1SvImJ_T0058429.1 MGP_129S1SvImJ_G0026699.1 mouse_genomes_project 2 158567870 158577471 - Sun5 protein_coding processed_transcript MGP_129S1SvImJ_T0058430.1 MGP_129S1SvImJ_G0026699.1 mouse_genomes_project 2 158571763 158577471 - Sun5 protein_coding processed_transcript MGP_129S1SvImJ_T0013494.1 MGP_129S1SvImJ_G0011583.1 mouse_genomes_project 2 33002810 33003170 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055532.1 MGP_129S1SvImJ_G0025878.1 mouse_genomes_project 2 80000693 80004926 - MGP_129S1SvImJ_P0055532 Neurod1 protein_coding protein_coding MGP_129S1SvImJ_T0007338.1 MGP_129S1SvImJ_G0006018.1 mouse_genomes_project 2 136201779 136261028 + AU019990 lincRNA lincRNA MGP_129S1SvImJ_T0007339.1 MGP_129S1SvImJ_G0006018.1 mouse_genomes_project 2 136201779 136258151 + AU019990 lincRNA lincRNA MGP_129S1SvImJ_T0053764.1 MGP_129S1SvImJ_G0025557.1 mouse_genomes_project 2 28394501 28399478 - D2Wsu81e protein_coding retained_intron MGP_129S1SvImJ_T0053765.1 MGP_129S1SvImJ_G0025557.1 mouse_genomes_project 2 28394501 28399491 - D2Wsu81e protein_coding retained_intron MGP_129S1SvImJ_T0053766.1 MGP_129S1SvImJ_G0025557.1 mouse_genomes_project 2 28394516 28398554 - D2Wsu81e protein_coding retained_intron MGP_129S1SvImJ_T0053767.1 MGP_129S1SvImJ_G0025557.1 mouse_genomes_project 2 28394519 28399033 - D2Wsu81e protein_coding retained_intron MGP_129S1SvImJ_T0053768.1 MGP_129S1SvImJ_G0025557.1 mouse_genomes_project 2 28394519 28399499 - MGP_129S1SvImJ_P0053768 D2Wsu81e protein_coding protein_coding MGP_129S1SvImJ_T0053769.1 MGP_129S1SvImJ_G0025557.1 mouse_genomes_project 2 28394521 28399508 - D2Wsu81e protein_coding retained_intron MGP_129S1SvImJ_T0053770.1 MGP_129S1SvImJ_G0025557.1 mouse_genomes_project 2 28395979 28399014 - D2Wsu81e protein_coding processed_transcript MGP_129S1SvImJ_T0053771.1 MGP_129S1SvImJ_G0025557.1 mouse_genomes_project 2 28397411 28399504 - D2Wsu81e protein_coding retained_intron MGP_129S1SvImJ_T0055538.1 MGP_129S1SvImJ_G0025880.1 mouse_genomes_project 2 80265775 80372710 + MGP_129S1SvImJ_P0055538 Ppp1r1c protein_coding protein_coding MGP_129S1SvImJ_T0055539.1 MGP_129S1SvImJ_G0025880.1 mouse_genomes_project 2 80265917 80370931 + MGP_129S1SvImJ_P0055539 Ppp1r1c protein_coding protein_coding MGP_129S1SvImJ_T0055540.1 MGP_129S1SvImJ_G0025880.1 mouse_genomes_project 2 80265918 80377990 + MGP_129S1SvImJ_P0055540 Ppp1r1c protein_coding protein_coding MGP_129S1SvImJ_T0055541.1 MGP_129S1SvImJ_G0025880.1 mouse_genomes_project 2 80266057 80380893 + Ppp1r1c protein_coding processed_transcript MGP_129S1SvImJ_T0055542.1 MGP_129S1SvImJ_G0025880.1 mouse_genomes_project 2 80349169 80371687 + Ppp1r1c protein_coding processed_transcript MGP_129S1SvImJ_T0013493.1 MGP_129S1SvImJ_G0011582.1 mouse_genomes_project 2 32186475 32186885 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056634.1 MGP_129S1SvImJ_G0026250.1 mouse_genomes_project 2 113523014 113549809 - MGP_129S1SvImJ_P0056634 Gm15130 protein_coding protein_coding MGP_129S1SvImJ_T0054310.1 MGP_129S1SvImJ_G0025638.1 mouse_genomes_project 2 32996593 33095589 + MGP_129S1SvImJ_P0054310 Mapkap1 protein_coding protein_coding MGP_129S1SvImJ_T0054311.1 MGP_129S1SvImJ_G0025638.1 mouse_genomes_project 2 32996691 33023570 + MGP_129S1SvImJ_P0054311 Mapkap1 protein_coding protein_coding MGP_129S1SvImJ_T0054312.1 MGP_129S1SvImJ_G0025638.1 mouse_genomes_project 2 32996694 33076255 + Mapkap1 protein_coding processed_transcript MGP_129S1SvImJ_T0054313.1 MGP_129S1SvImJ_G0025638.1 mouse_genomes_project 2 32996700 33225860 + MGP_129S1SvImJ_P0054313 Mapkap1 protein_coding protein_coding MGP_129S1SvImJ_T0054314.1 MGP_129S1SvImJ_G0025638.1 mouse_genomes_project 2 32996702 33225844 + MGP_129S1SvImJ_P0054314 Mapkap1 protein_coding protein_coding MGP_129S1SvImJ_T0054315.1 MGP_129S1SvImJ_G0025638.1 mouse_genomes_project 2 33030858 33132714 + Mapkap1 protein_coding processed_transcript MGP_129S1SvImJ_T0054316.1 MGP_129S1SvImJ_G0025638.1 mouse_genomes_project 2 33036711 33095746 + MGP_129S1SvImJ_P0054316 Mapkap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054317.1 MGP_129S1SvImJ_G0025638.1 mouse_genomes_project 2 33221877 33226215 + Mapkap1 protein_coding processed_transcript MGP_129S1SvImJ_T0099701.1 MGP_129S1SvImJ_G0037768.1 mouse_genomes_project 2 136981119 136981178 + Gm27449 snRNA snRNA MGP_129S1SvImJ_T0013727.1 MGP_129S1SvImJ_G0011816.1 mouse_genomes_project 2 111795763 111796249 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007249.1 MGP_129S1SvImJ_G0005947.1 mouse_genomes_project 2 75793519 75801642 + Gm13658 lincRNA lincRNA MGP_129S1SvImJ_T0013722.1 MGP_129S1SvImJ_G0011811.1 mouse_genomes_project 2 109247937 109248774 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055438.1 MGP_129S1SvImJ_G0025868.1 mouse_genomes_project 2 77057822 77067710 - MGP_129S1SvImJ_P0055438 Fkbp7 protein_coding protein_coding MGP_129S1SvImJ_T0055439.1 MGP_129S1SvImJ_G0025868.1 mouse_genomes_project 2 77057841 77060022 - Fkbp7 protein_coding processed_transcript MGP_129S1SvImJ_T0055440.1 MGP_129S1SvImJ_G0025868.1 mouse_genomes_project 2 77060485 77067756 - MGP_129S1SvImJ_P0055440 Fkbp7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055441.1 MGP_129S1SvImJ_G0025868.1 mouse_genomes_project 2 77066001 77067725 - Fkbp7 protein_coding retained_intron MGP_129S1SvImJ_T0010366.1 MGP_129S1SvImJ_G0008482.1 mouse_genomes_project 2 7861621 7861701 + miRNA miRNA MGP_129S1SvImJ_T0058135.1 MGP_129S1SvImJ_G0026607.1 mouse_genomes_project 2 152746702 152750425 - MGP_129S1SvImJ_P0058135 Thbd protein_coding protein_coding MGP_129S1SvImJ_T0057692.1 MGP_129S1SvImJ_G0026511.1 mouse_genomes_project 2 134083909 134101703 - MGP_129S1SvImJ_P0057692 Fastkd5 protein_coding protein_coding MGP_129S1SvImJ_T0057693.1 MGP_129S1SvImJ_G0026511.1 mouse_genomes_project 2 134083911 134101689 - MGP_129S1SvImJ_P0057693 Fastkd5 protein_coding protein_coding MGP_129S1SvImJ_T0011526.1 MGP_129S1SvImJ_G0009642.1 mouse_genomes_project 2 107271726 107271986 - Gm27715 misc_RNA misc_RNA MGP_129S1SvImJ_T0100973.1 MGP_129S1SvImJ_G0039040.1 mouse_genomes_project 2 133726754 133726826 + Snord57 snoRNA snoRNA MGP_129S1SvImJ_T0059292.1 MGP_129S1SvImJ_G0026891.1 mouse_genomes_project 2 170905618 170924928 - MGP_129S1SvImJ_P0059292 Zfp663 protein_coding protein_coding MGP_129S1SvImJ_T0059293.1 MGP_129S1SvImJ_G0026891.1 mouse_genomes_project 2 170905619 170916122 - MGP_129S1SvImJ_P0059293 Zfp663 protein_coding protein_coding MGP_129S1SvImJ_T0059294.1 MGP_129S1SvImJ_G0026891.1 mouse_genomes_project 2 170908132 170915391 - Zfp663 protein_coding processed_transcript MGP_129S1SvImJ_T0059295.1 MGP_129S1SvImJ_G0026891.1 mouse_genomes_project 2 170908365 170924922 - MGP_129S1SvImJ_P0059295 Zfp663 protein_coding protein_coding MGP_129S1SvImJ_T0054385.1 MGP_129S1SvImJ_G0025648.1 mouse_genomes_project 2 33701904 33721982 - MGP_129S1SvImJ_P0054385 AI182371 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0054386.1 MGP_129S1SvImJ_G0025648.1 mouse_genomes_project 2 33703469 33722014 - MGP_129S1SvImJ_P0054386 AI182371 protein_coding protein_coding MGP_129S1SvImJ_T0054387.1 MGP_129S1SvImJ_G0025648.1 mouse_genomes_project 2 33707032 33722013 - MGP_129S1SvImJ_P0054387 AI182371 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054388.1 MGP_129S1SvImJ_G0025648.1 mouse_genomes_project 2 33707373 33715536 - AI182371 protein_coding processed_transcript MGP_129S1SvImJ_T0054389.1 MGP_129S1SvImJ_G0025648.1 mouse_genomes_project 2 33710082 33722872 - AI182371 protein_coding processed_transcript MGP_129S1SvImJ_T0053855.1 MGP_129S1SvImJ_G0025569.1 mouse_genomes_project 2 28642425 28676060 + MGP_129S1SvImJ_P0053855 Ptpa protein_coding protein_coding MGP_129S1SvImJ_T0053856.1 MGP_129S1SvImJ_G0025569.1 mouse_genomes_project 2 28642517 28676061 + MGP_129S1SvImJ_P0053856 Ptpa protein_coding protein_coding MGP_129S1SvImJ_T0053857.1 MGP_129S1SvImJ_G0025569.1 mouse_genomes_project 2 28642523 28659199 + MGP_129S1SvImJ_P0053857 Ptpa protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053858.1 MGP_129S1SvImJ_G0025569.1 mouse_genomes_project 2 28642528 28675872 + MGP_129S1SvImJ_P0053858 Ptpa protein_coding protein_coding MGP_129S1SvImJ_T0053859.1 MGP_129S1SvImJ_G0025569.1 mouse_genomes_project 2 28642582 28676059 + Ptpa protein_coding retained_intron MGP_129S1SvImJ_T0053860.1 MGP_129S1SvImJ_G0025569.1 mouse_genomes_project 2 28642688 28655577 + Ptpa protein_coding processed_transcript MGP_129S1SvImJ_T0053861.1 MGP_129S1SvImJ_G0025569.1 mouse_genomes_project 2 28655528 28666356 + Ptpa protein_coding retained_intron MGP_129S1SvImJ_T0053862.1 MGP_129S1SvImJ_G0025569.1 mouse_genomes_project 2 28666483 28675205 + MGP_129S1SvImJ_P0053862 Ptpa protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053863.1 MGP_129S1SvImJ_G0025569.1 mouse_genomes_project 2 28670107 28675386 + MGP_129S1SvImJ_P0053863 Ptpa protein_coding protein_coding MGP_129S1SvImJ_T0053864.1 MGP_129S1SvImJ_G0025569.1 mouse_genomes_project 2 28670989 28675061 + MGP_129S1SvImJ_P0053864 Ptpa protein_coding protein_coding MGP_129S1SvImJ_T0053865.1 MGP_129S1SvImJ_G0025569.1 mouse_genomes_project 2 28671473 28675154 + Ptpa protein_coding processed_transcript MGP_129S1SvImJ_T0053866.1 MGP_129S1SvImJ_G0025569.1 mouse_genomes_project 2 28673910 28675329 + Ptpa protein_coding processed_transcript MGP_129S1SvImJ_T0053867.1 MGP_129S1SvImJ_G0025569.1 mouse_genomes_project 2 28673970 28675031 + Ptpa protein_coding processed_transcript MGP_129S1SvImJ_T0058442.1 MGP_129S1SvImJ_G0026704.1 mouse_genomes_project 2 158685879 158711421 + MGP_129S1SvImJ_P0058442 Bpifa6 protein_coding protein_coding MGP_129S1SvImJ_T0057213.1 MGP_129S1SvImJ_G0026391.1 mouse_genomes_project 2 124311039 124341601 + MGP_129S1SvImJ_P0057213 Pdia3 protein_coding protein_coding MGP_129S1SvImJ_T0057214.1 MGP_129S1SvImJ_G0026391.1 mouse_genomes_project 2 124311198 124325992 + Pdia3 protein_coding processed_transcript MGP_129S1SvImJ_T0057215.1 MGP_129S1SvImJ_G0026391.1 mouse_genomes_project 2 124311423 124336821 + MGP_129S1SvImJ_P0057215 Pdia3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057216.1 MGP_129S1SvImJ_G0026391.1 mouse_genomes_project 2 124326020 124335268 + Pdia3 protein_coding retained_intron MGP_129S1SvImJ_T0102435.1 MGP_129S1SvImJ_G0040269.1 mouse_genomes_project 2 91626309 91627392 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0007286.1 MGP_129S1SvImJ_G0005976.1 mouse_genomes_project 2 105172538 105176687 - Gm13869 lincRNA lincRNA MGP_129S1SvImJ_T0058682.1 MGP_129S1SvImJ_G0026755.1 mouse_genomes_project 2 160929572 160971296 - MGP_129S1SvImJ_P0058682 Cpne1 protein_coding protein_coding MGP_129S1SvImJ_T0058683.1 MGP_129S1SvImJ_G0026755.1 mouse_genomes_project 2 160929575 160971249 - Cpne1 protein_coding retained_intron MGP_129S1SvImJ_T0058684.1 MGP_129S1SvImJ_G0026755.1 mouse_genomes_project 2 160929575 160971300 - MGP_129S1SvImJ_P0058684 Cpne1 protein_coding protein_coding MGP_129S1SvImJ_T0058687.1 MGP_129S1SvImJ_G0026755.1 mouse_genomes_project 2 160929577 160971304 - MGP_129S1SvImJ_P0058687 Cpne1 protein_coding protein_coding MGP_129S1SvImJ_T0058688.1 MGP_129S1SvImJ_G0026755.1 mouse_genomes_project 2 160931065 160932028 - Cpne1 protein_coding processed_transcript MGP_129S1SvImJ_T0058689.1 MGP_129S1SvImJ_G0026755.1 mouse_genomes_project 2 160931087 160971262 - MGP_129S1SvImJ_P0058689 Cpne1 protein_coding protein_coding MGP_129S1SvImJ_T0058690.1 MGP_129S1SvImJ_G0026755.1 mouse_genomes_project 2 160931121 160933983 - MGP_129S1SvImJ_P0058690 Cpne1 protein_coding protein_coding MGP_129S1SvImJ_T0058691.1 MGP_129S1SvImJ_G0026755.1 mouse_genomes_project 2 160931126 160934008 - Cpne1 protein_coding retained_intron MGP_129S1SvImJ_T0058692.1 MGP_129S1SvImJ_G0026755.1 mouse_genomes_project 2 160931240 160971265 - MGP_129S1SvImJ_P0058692 Cpne1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058693.1 MGP_129S1SvImJ_G0026755.1 mouse_genomes_project 2 160931245 160935892 - MGP_129S1SvImJ_P0058693 Cpne1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058694.1 MGP_129S1SvImJ_G0026755.1 mouse_genomes_project 2 160931830 160934284 - Cpne1 protein_coding retained_intron MGP_129S1SvImJ_T0058695.1 MGP_129S1SvImJ_G0026755.1 mouse_genomes_project 2 160931933 160971326 - MGP_129S1SvImJ_P0058695 Cpne1 protein_coding protein_coding MGP_129S1SvImJ_T0058696.1 MGP_129S1SvImJ_G0026755.1 mouse_genomes_project 2 160935130 160971270 - MGP_129S1SvImJ_P0058696 Cpne1 protein_coding protein_coding MGP_129S1SvImJ_T0058697.1 MGP_129S1SvImJ_G0026755.1 mouse_genomes_project 2 160935151 160936323 - Cpne1 protein_coding retained_intron MGP_129S1SvImJ_T0058698.1 MGP_129S1SvImJ_G0026755.1 mouse_genomes_project 2 160935898 160971320 - MGP_129S1SvImJ_P0058698 Cpne1 protein_coding protein_coding MGP_129S1SvImJ_T0058699.1 MGP_129S1SvImJ_G0026755.1 mouse_genomes_project 2 160936305 160971270 - MGP_129S1SvImJ_P0058699 Cpne1 protein_coding protein_coding MGP_129S1SvImJ_T0058700.1 MGP_129S1SvImJ_G0026755.1 mouse_genomes_project 2 160936631 160971224 - MGP_129S1SvImJ_P0058700 Cpne1 protein_coding protein_coding MGP_129S1SvImJ_T0013625.1 MGP_129S1SvImJ_G0011714.1 mouse_genomes_project 2 79335738 79335906 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058454.1 MGP_129S1SvImJ_G0026709.1 mouse_genomes_project 2 158908421 158938808 + MGP_129S1SvImJ_P0058454 Bpifb1 protein_coding protein_coding MGP_129S1SvImJ_T0058455.1 MGP_129S1SvImJ_G0026709.1 mouse_genomes_project 2 158908426 158938781 + Bpifb1 protein_coding retained_intron MGP_129S1SvImJ_T0058456.1 MGP_129S1SvImJ_G0026709.1 mouse_genomes_project 2 158918061 158938782 + MGP_129S1SvImJ_P0058456 Bpifb1 protein_coding protein_coding MGP_129S1SvImJ_T0058177.1 MGP_129S1SvImJ_G0026626.1 mouse_genomes_project 2 155018755 155027283 + MGP_129S1SvImJ_P0058177 Cst7 protein_coding protein_coding MGP_129S1SvImJ_T0007304.1 MGP_129S1SvImJ_G0005993.1 mouse_genomes_project 2 117886929 117889513 + Gm13976 lincRNA lincRNA MGP_129S1SvImJ_T0001063.1 MGP_129S1SvImJ_G0000992.1 mouse_genomes_project 2 10511476 10515445 + TEC TEC MGP_129S1SvImJ_T0098852.1 MGP_129S1SvImJ_G0036931.1 mouse_genomes_project 2 1162363 1166009 + Gm37814 sense_intronic sense_intronic MGP_129S1SvImJ_T0001121.1 MGP_129S1SvImJ_G0001049.1 mouse_genomes_project 2 153262269 153262634 - TEC TEC MGP_129S1SvImJ_T0056640.1 MGP_129S1SvImJ_G0026255.1 mouse_genomes_project 2 113710140 113711082 + MGP_129S1SvImJ_P0056640 protein_coding protein_coding MGP_129S1SvImJ_T0057219.1 MGP_129S1SvImJ_G0026393.1 mouse_genomes_project 2 124341990 124358745 - MGP_129S1SvImJ_P0057219 Serinc4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057227.1 MGP_129S1SvImJ_G0026393.1 mouse_genomes_project 2 124354151 124359696 - MGP_129S1SvImJ_P0057227 Serinc4 protein_coding protein_coding MGP_129S1SvImJ_T0057228.1 MGP_129S1SvImJ_G0026393.1 mouse_genomes_project 2 124354151 124359608 - MGP_129S1SvImJ_P0057228 Serinc4 protein_coding protein_coding MGP_129S1SvImJ_T0057229.1 MGP_129S1SvImJ_G0026393.1 mouse_genomes_project 2 124354163 124358745 - MGP_129S1SvImJ_P0057229 Serinc4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057230.1 MGP_129S1SvImJ_G0026393.1 mouse_genomes_project 2 124354221 124358739 - MGP_129S1SvImJ_P0057230 Serinc4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057231.1 MGP_129S1SvImJ_G0026393.1 mouse_genomes_project 2 124355022 124356622 - Serinc4 protein_coding retained_intron MGP_129S1SvImJ_T0058137.1 MGP_129S1SvImJ_G0026609.1 mouse_genomes_project 2 153017573 153021000 + MGP_129S1SvImJ_P0058137 Nxt1 protein_coding protein_coding MGP_129S1SvImJ_T0058138.1 MGP_129S1SvImJ_G0026609.1 mouse_genomes_project 2 153017598 153021000 + MGP_129S1SvImJ_P0058138 Nxt1 protein_coding protein_coding MGP_129S1SvImJ_T0013781.1 MGP_129S1SvImJ_G0011870.1 mouse_genomes_project 2 135464134 135465008 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004126.1 MGP_129S1SvImJ_G0003651.1 mouse_genomes_project 2 146909702 146910310 + Kif16bos antisense antisense MGP_129S1SvImJ_T0013724.1 MGP_129S1SvImJ_G0011813.1 mouse_genomes_project 2 110858216 110859147 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058220.1 MGP_129S1SvImJ_G0026637.1 mouse_genomes_project 2 155548237 155553462 - MGP_129S1SvImJ_P0058220 protein_coding protein_coding MGP_129S1SvImJ_T0053514.1 MGP_129S1SvImJ_G0025515.1 mouse_genomes_project 2 25508716 25514233 + Wdr5 protein_coding processed_transcript MGP_129S1SvImJ_T0053515.1 MGP_129S1SvImJ_G0025515.1 mouse_genomes_project 2 25508716 25529680 + MGP_129S1SvImJ_P0053515 Wdr5 protein_coding protein_coding MGP_129S1SvImJ_T0053516.1 MGP_129S1SvImJ_G0025515.1 mouse_genomes_project 2 25513340 25528188 + MGP_129S1SvImJ_P0053516 Wdr5 protein_coding protein_coding MGP_129S1SvImJ_T0053517.1 MGP_129S1SvImJ_G0025515.1 mouse_genomes_project 2 25521293 25526500 + Wdr5 protein_coding processed_transcript MGP_129S1SvImJ_T0003976.1 MGP_129S1SvImJ_G0003550.1 mouse_genomes_project 2 32349509 32357285 + Nron antisense antisense MGP_129S1SvImJ_T0003977.1 MGP_129S1SvImJ_G0003550.1 mouse_genomes_project 2 32349521 32356149 + Nron antisense antisense MGP_129S1SvImJ_T0003978.1 MGP_129S1SvImJ_G0003550.1 mouse_genomes_project 2 32349552 32355132 + Nron antisense antisense MGP_129S1SvImJ_T0056125.1 MGP_129S1SvImJ_G0026150.1 mouse_genomes_project 2 92799399 92821154 + Lrp4 protein_coding processed_transcript MGP_129S1SvImJ_T0056126.1 MGP_129S1SvImJ_G0026150.1 mouse_genomes_project 2 92799399 92858358 + MGP_129S1SvImJ_P0056126 Lrp4 protein_coding protein_coding MGP_129S1SvImJ_T0056127.1 MGP_129S1SvImJ_G0026150.1 mouse_genomes_project 2 92818122 92822738 + Lrp4 protein_coding processed_transcript MGP_129S1SvImJ_T0056128.1 MGP_129S1SvImJ_G0026150.1 mouse_genomes_project 2 92818185 92820709 + Lrp4 protein_coding processed_transcript MGP_129S1SvImJ_T0054969.1 MGP_129S1SvImJ_G0025768.1 mouse_genomes_project 2 61707226 62007217 + MGP_129S1SvImJ_P0054969 Slc4a10 protein_coding protein_coding MGP_129S1SvImJ_T0054970.1 MGP_129S1SvImJ_G0025768.1 mouse_genomes_project 2 61707349 62005311 + Slc4a10 protein_coding processed_transcript MGP_129S1SvImJ_T0054971.1 MGP_129S1SvImJ_G0025768.1 mouse_genomes_project 2 61707349 62007217 + MGP_129S1SvImJ_P0054971 Slc4a10 protein_coding protein_coding MGP_129S1SvImJ_T0054972.1 MGP_129S1SvImJ_G0025768.1 mouse_genomes_project 2 61707409 62007217 + MGP_129S1SvImJ_P0054972 Slc4a10 protein_coding protein_coding MGP_129S1SvImJ_T0054973.1 MGP_129S1SvImJ_G0025768.1 mouse_genomes_project 2 61827748 61838992 + Slc4a10 protein_coding processed_transcript MGP_129S1SvImJ_T0054974.1 MGP_129S1SvImJ_G0025768.1 mouse_genomes_project 2 61945643 61947379 + Slc4a10 protein_coding processed_transcript MGP_129S1SvImJ_T0054975.1 MGP_129S1SvImJ_G0025768.1 mouse_genomes_project 2 61997878 62005865 + Slc4a10 protein_coding processed_transcript MGP_129S1SvImJ_T0007292.1 MGP_129S1SvImJ_G0005981.1 mouse_genomes_project 2 107831481 107834309 - Paupar lincRNA lincRNA MGP_129S1SvImJ_T0010404.1 MGP_129S1SvImJ_G0008520.1 mouse_genomes_project 2 25438577 25438659 - Mir7578 miRNA miRNA MGP_129S1SvImJ_T0010431.1 MGP_129S1SvImJ_G0008547.1 mouse_genomes_project 2 56265042 56265139 + Mir195b miRNA miRNA MGP_129S1SvImJ_T0013559.1 MGP_129S1SvImJ_G0011648.1 mouse_genomes_project 2 56559930 56560620 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054825.1 MGP_129S1SvImJ_G0025745.1 mouse_genomes_project 2 57533879 57581961 + MGP_129S1SvImJ_P0054825 Galnt5 protein_coding protein_coding MGP_129S1SvImJ_T0054826.1 MGP_129S1SvImJ_G0025745.1 mouse_genomes_project 2 57533879 57576009 + MGP_129S1SvImJ_P0054826 Galnt5 protein_coding protein_coding MGP_129S1SvImJ_T0017946.1 MGP_129S1SvImJ_G0015489.1 mouse_genomes_project 2 171448308 171449658 + BC046401 processed_transcript processed_transcript MGP_129S1SvImJ_T0010473.1 MGP_129S1SvImJ_G0008589.1 mouse_genomes_project 2 132293327 132293445 - Gm22859 miRNA miRNA MGP_129S1SvImJ_T0058471.1 MGP_129S1SvImJ_G0026715.1 mouse_genomes_project 2 159182372 159294792 + MGP_129S1SvImJ_P0058471 Cbfa2t2 protein_coding protein_coding MGP_129S1SvImJ_T0058472.1 MGP_129S1SvImJ_G0026715.1 mouse_genomes_project 2 159182375 159282118 + MGP_129S1SvImJ_P0058472 Cbfa2t2 protein_coding protein_coding MGP_129S1SvImJ_T0058473.1 MGP_129S1SvImJ_G0026715.1 mouse_genomes_project 2 159182386 159294792 + MGP_129S1SvImJ_P0058473 Cbfa2t2 protein_coding protein_coding MGP_129S1SvImJ_T0058474.1 MGP_129S1SvImJ_G0026715.1 mouse_genomes_project 2 159182426 159273523 + MGP_129S1SvImJ_P0058474 Cbfa2t2 protein_coding protein_coding MGP_129S1SvImJ_T0058475.1 MGP_129S1SvImJ_G0026715.1 mouse_genomes_project 2 159182494 159294788 + MGP_129S1SvImJ_P0058475 Cbfa2t2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0058476.1 MGP_129S1SvImJ_G0026715.1 mouse_genomes_project 2 159182733 159258930 + MGP_129S1SvImJ_P0058476 Cbfa2t2 protein_coding protein_coding MGP_129S1SvImJ_T0058477.1 MGP_129S1SvImJ_G0026715.1 mouse_genomes_project 2 159254596 159294788 + MGP_129S1SvImJ_P0058477 Cbfa2t2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0058478.1 MGP_129S1SvImJ_G0026715.1 mouse_genomes_project 2 159265624 159294792 + MGP_129S1SvImJ_P0058478 Cbfa2t2 protein_coding protein_coding MGP_129S1SvImJ_T0058479.1 MGP_129S1SvImJ_G0026715.1 mouse_genomes_project 2 159271660 159273751 + Cbfa2t2 protein_coding retained_intron MGP_129S1SvImJ_T0058480.1 MGP_129S1SvImJ_G0026715.1 mouse_genomes_project 2 159279688 159287270 + Cbfa2t2 protein_coding retained_intron MGP_129S1SvImJ_T0058481.1 MGP_129S1SvImJ_G0026715.1 mouse_genomes_project 2 159286709 159290407 + Cbfa2t2 protein_coding retained_intron MGP_129S1SvImJ_T0052870.1 MGP_129S1SvImJ_G0025395.1 mouse_genomes_project 2 20814526 20859894 + MGP_129S1SvImJ_P0052870 Acbd5 protein_coding protein_coding MGP_129S1SvImJ_T0052871.1 MGP_129S1SvImJ_G0025395.1 mouse_genomes_project 2 20814559 20859894 + MGP_129S1SvImJ_P0052871 Acbd5 protein_coding protein_coding MGP_129S1SvImJ_T0052872.1 MGP_129S1SvImJ_G0025395.1 mouse_genomes_project 2 20814593 20821923 + MGP_129S1SvImJ_P0052872 Acbd5 protein_coding protein_coding MGP_129S1SvImJ_T0052873.1 MGP_129S1SvImJ_G0025395.1 mouse_genomes_project 2 20815426 20859892 + MGP_129S1SvImJ_P0052873 Acbd5 protein_coding protein_coding MGP_129S1SvImJ_T0052874.1 MGP_129S1SvImJ_G0025395.1 mouse_genomes_project 2 20815430 20859894 + MGP_129S1SvImJ_P0052874 Acbd5 protein_coding protein_coding MGP_129S1SvImJ_T0052875.1 MGP_129S1SvImJ_G0025395.1 mouse_genomes_project 2 20815685 20833916 + MGP_129S1SvImJ_P0052875 Acbd5 protein_coding protein_coding MGP_129S1SvImJ_T0004166.1 MGP_129S1SvImJ_G0003686.1 mouse_genomes_project 2 168760691 168761258 + 2900093K20Rik antisense antisense MGP_129S1SvImJ_T0059522.1 MGP_129S1SvImJ_G0026942.1 mouse_genomes_project 2 178526462 178544323 - MGP_129S1SvImJ_P0059522 Aurka protein_coding protein_coding MGP_129S1SvImJ_T0059523.1 MGP_129S1SvImJ_G0026942.1 mouse_genomes_project 2 178526468 178544294 - MGP_129S1SvImJ_P0059523 Aurka protein_coding protein_coding MGP_129S1SvImJ_T0059524.1 MGP_129S1SvImJ_G0026942.1 mouse_genomes_project 2 178527438 178536887 - Aurka protein_coding retained_intron MGP_129S1SvImJ_T0059525.1 MGP_129S1SvImJ_G0026942.1 mouse_genomes_project 2 178540357 178544309 - Aurka protein_coding retained_intron MGP_129S1SvImJ_T0100972.1 MGP_129S1SvImJ_G0039039.1 mouse_genomes_project 2 133726435 133726505 + Gm23650 snoRNA snoRNA MGP_129S1SvImJ_T0058329.1 MGP_129S1SvImJ_G0026675.1 mouse_genomes_project 2 157259549 157260485 + MGP_129S1SvImJ_P0058329 Mcts2 protein_coding protein_coding MGP_129S1SvImJ_T0059344.1 MGP_129S1SvImJ_G0026901.1 mouse_genomes_project 2 172222793 172378024 - MGP_129S1SvImJ_P0059344 Prex1 protein_coding protein_coding MGP_129S1SvImJ_T0059345.1 MGP_129S1SvImJ_G0026901.1 mouse_genomes_project 2 172223411 172297473 - MGP_129S1SvImJ_P0059345 Prex1 protein_coding protein_coding MGP_129S1SvImJ_T0059346.1 MGP_129S1SvImJ_G0026901.1 mouse_genomes_project 2 172223417 172239870 - MGP_129S1SvImJ_P0059346 Prex1 protein_coding protein_coding MGP_129S1SvImJ_T0059347.1 MGP_129S1SvImJ_G0026901.1 mouse_genomes_project 2 172224768 172230751 - Prex1 protein_coding processed_transcript MGP_129S1SvImJ_T0059348.1 MGP_129S1SvImJ_G0026901.1 mouse_genomes_project 2 172257484 172260816 - Prex1 protein_coding retained_intron MGP_129S1SvImJ_T0059349.1 MGP_129S1SvImJ_G0026901.1 mouse_genomes_project 2 172291590 172366809 - Prex1 protein_coding processed_transcript MGP_129S1SvImJ_T0059350.1 MGP_129S1SvImJ_G0026901.1 mouse_genomes_project 2 172302889 172377983 - Prex1 protein_coding retained_intron MGP_129S1SvImJ_T0059351.1 MGP_129S1SvImJ_G0026901.1 mouse_genomes_project 2 172303102 172377794 - Prex1 protein_coding retained_intron MGP_129S1SvImJ_T0013626.1 MGP_129S1SvImJ_G0011715.1 mouse_genomes_project 2 79536676 79537127 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056623.1 MGP_129S1SvImJ_G0026246.1 mouse_genomes_project 2 112941606 112972721 + Slc5a12 protein_coding retained_intron MGP_129S1SvImJ_T0056624.1 MGP_129S1SvImJ_G0026246.1 mouse_genomes_project 2 112941789 112997877 + MGP_129S1SvImJ_P0056624 Slc5a12 protein_coding protein_coding MGP_129S1SvImJ_T0056625.1 MGP_129S1SvImJ_G0026246.1 mouse_genomes_project 2 112941911 112949948 + Slc5a12 protein_coding processed_transcript MGP_129S1SvImJ_T0056626.1 MGP_129S1SvImJ_G0026246.1 mouse_genomes_project 2 112949882 112998045 + Slc5a12 protein_coding processed_transcript MGP_129S1SvImJ_T0001056.1 MGP_129S1SvImJ_G0000985.1 mouse_genomes_project 2 9103864 9104285 + TEC TEC MGP_129S1SvImJ_T0013739.1 MGP_129S1SvImJ_G0011828.1 mouse_genomes_project 2 114840982 114841283 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004024.1 MGP_129S1SvImJ_G0003585.1 mouse_genomes_project 2 73215676 73227020 + Sp3os antisense antisense MGP_129S1SvImJ_T0004025.1 MGP_129S1SvImJ_G0003585.1 mouse_genomes_project 2 73215676 73226785 + Sp3os antisense antisense MGP_129S1SvImJ_T0004026.1 MGP_129S1SvImJ_G0003585.1 mouse_genomes_project 2 73215768 73226889 + Sp3os antisense antisense MGP_129S1SvImJ_T0004027.1 MGP_129S1SvImJ_G0003585.1 mouse_genomes_project 2 73225583 73226950 + Sp3os antisense antisense MGP_129S1SvImJ_T0017944.1 MGP_129S1SvImJ_G0015487.1 mouse_genomes_project 2 166743677 166744000 - Gm29229 processed_transcript processed_transcript MGP_129S1SvImJ_T0013859.1 MGP_129S1SvImJ_G0011948.1 mouse_genomes_project 2 162152199 162152559 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057343.1 MGP_129S1SvImJ_G0026423.1 mouse_genomes_project 2 128227757 128252552 + MGP_129S1SvImJ_P0057343 Slc24a5 protein_coding protein_coding MGP_129S1SvImJ_T0057344.1 MGP_129S1SvImJ_G0026423.1 mouse_genomes_project 2 128227814 128240579 + MGP_129S1SvImJ_P0057344 Slc24a5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0057345.1 MGP_129S1SvImJ_G0026423.1 mouse_genomes_project 2 128228878 128247102 + Slc24a5 protein_coding processed_transcript MGP_129S1SvImJ_T0057346.1 MGP_129S1SvImJ_G0026423.1 mouse_genomes_project 2 128239991 128246955 + Slc24a5 protein_coding retained_intron MGP_129S1SvImJ_T0058610.1 MGP_129S1SvImJ_G0026745.1 mouse_genomes_project 2 160668543 160675535 - MGP_129S1SvImJ_P0058610 Eif6 protein_coding protein_coding MGP_129S1SvImJ_T0058611.1 MGP_129S1SvImJ_G0026745.1 mouse_genomes_project 2 160668548 160671178 - Eif6 protein_coding processed_transcript MGP_129S1SvImJ_T0058612.1 MGP_129S1SvImJ_G0026745.1 mouse_genomes_project 2 160668744 160675046 - MGP_129S1SvImJ_P0058612 Eif6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058613.1 MGP_129S1SvImJ_G0026745.1 mouse_genomes_project 2 160671534 160675046 - Eif6 protein_coding retained_intron MGP_129S1SvImJ_T0058614.1 MGP_129S1SvImJ_G0026745.1 mouse_genomes_project 2 160671534 160675046 - MGP_129S1SvImJ_P0058614 Eif6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058615.1 MGP_129S1SvImJ_G0026745.1 mouse_genomes_project 2 160672476 160675376 - MGP_129S1SvImJ_P0058615 Eif6 protein_coding protein_coding MGP_129S1SvImJ_T0058616.1 MGP_129S1SvImJ_G0026745.1 mouse_genomes_project 2 160673768 160675273 - MGP_129S1SvImJ_P0058616 Eif6 protein_coding protein_coding MGP_129S1SvImJ_T0055897.1 MGP_129S1SvImJ_G0026088.1 mouse_genomes_project 2 90431600 90432572 - MGP_129S1SvImJ_P0055897 Olfr1228 protein_coding protein_coding MGP_129S1SvImJ_T0059117.1 MGP_129S1SvImJ_G0026847.1 mouse_genomes_project 2 169754973 169756634 + MGP_129S1SvImJ_P0059117 Svs5 protein_coding protein_coding MGP_129S1SvImJ_T0059118.1 MGP_129S1SvImJ_G0026847.1 mouse_genomes_project 2 169755687 169756634 + MGP_129S1SvImJ_P0059118 Svs5 protein_coding protein_coding MGP_129S1SvImJ_T0056994.1 MGP_129S1SvImJ_G0026362.1 mouse_genomes_project 2 123126788 123149524 - MGP_129S1SvImJ_P0056994 Pla2g4d protein_coding protein_coding MGP_129S1SvImJ_T0056362.1 MGP_129S1SvImJ_G0026192.1 mouse_genomes_project 2 103584832 103682890 - MGP_129S1SvImJ_P0056362 Prr5l protein_coding protein_coding MGP_129S1SvImJ_T0056363.1 MGP_129S1SvImJ_G0026192.1 mouse_genomes_project 2 103584832 103718263 - MGP_129S1SvImJ_P0056363 Prr5l protein_coding protein_coding MGP_129S1SvImJ_T0056364.1 MGP_129S1SvImJ_G0026192.1 mouse_genomes_project 2 103586786 103682891 - MGP_129S1SvImJ_P0056364 Prr5l protein_coding protein_coding MGP_129S1SvImJ_T0056365.1 MGP_129S1SvImJ_G0026192.1 mouse_genomes_project 2 103587796 103682833 - MGP_129S1SvImJ_P0056365 Prr5l protein_coding protein_coding MGP_129S1SvImJ_T0056366.1 MGP_129S1SvImJ_G0026192.1 mouse_genomes_project 2 103613245 103718263 - MGP_129S1SvImJ_P0056366 Prr5l protein_coding protein_coding MGP_129S1SvImJ_T0056367.1 MGP_129S1SvImJ_G0026192.1 mouse_genomes_project 2 103634662 103763944 - MGP_129S1SvImJ_P0056367 Prr5l protein_coding protein_coding MGP_129S1SvImJ_T0056368.1 MGP_129S1SvImJ_G0026192.1 mouse_genomes_project 2 103650446 103683237 - MGP_129S1SvImJ_P0056368 Prr5l protein_coding protein_coding MGP_129S1SvImJ_T0056369.1 MGP_129S1SvImJ_G0026192.1 mouse_genomes_project 2 103650601 103682916 - Prr5l protein_coding processed_transcript MGP_129S1SvImJ_T0056370.1 MGP_129S1SvImJ_G0026192.1 mouse_genomes_project 2 103708128 103763957 - Prr5l protein_coding processed_transcript MGP_129S1SvImJ_T0059464.1 MGP_129S1SvImJ_G0026927.1 mouse_genomes_project 2 174329390 174443883 - MGP_129S1SvImJ_P0059464 Nfatc2 protein_coding protein_coding MGP_129S1SvImJ_T0059465.1 MGP_129S1SvImJ_G0026927.1 mouse_genomes_project 2 174329390 174443778 - MGP_129S1SvImJ_P0059465 Nfatc2 protein_coding protein_coding MGP_129S1SvImJ_T0059466.1 MGP_129S1SvImJ_G0026927.1 mouse_genomes_project 2 174329393 174405799 - Nfatc2 protein_coding processed_transcript MGP_129S1SvImJ_T0059467.1 MGP_129S1SvImJ_G0026927.1 mouse_genomes_project 2 174371809 174457140 - Nfatc2 protein_coding processed_transcript MGP_129S1SvImJ_T0059468.1 MGP_129S1SvImJ_G0026927.1 mouse_genomes_project 2 174371812 174443709 - MGP_129S1SvImJ_P0059468 Nfatc2 protein_coding protein_coding MGP_129S1SvImJ_T0059469.1 MGP_129S1SvImJ_G0026927.1 mouse_genomes_project 2 174372713 174457165 - MGP_129S1SvImJ_P0059469 Nfatc2 protein_coding protein_coding MGP_129S1SvImJ_T0059470.1 MGP_129S1SvImJ_G0026927.1 mouse_genomes_project 2 174387074 174443849 - Nfatc2 protein_coding retained_intron MGP_129S1SvImJ_T0059471.1 MGP_129S1SvImJ_G0026927.1 mouse_genomes_project 2 174419977 174443883 - Nfatc2 protein_coding retained_intron MGP_129S1SvImJ_T0013523.1 MGP_129S1SvImJ_G0011612.1 mouse_genomes_project 2 39816430 39817394 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058298.1 MGP_129S1SvImJ_G0026656.1 mouse_genomes_project 2 156866448 156872956 - MGP_129S1SvImJ_P0058298 Trib3 protein_coding protein_coding MGP_129S1SvImJ_T0058299.1 MGP_129S1SvImJ_G0026656.1 mouse_genomes_project 2 156868778 156872912 - Trib3 protein_coding processed_transcript MGP_129S1SvImJ_T0058300.1 MGP_129S1SvImJ_G0026656.1 mouse_genomes_project 2 156871889 156872894 - Trib3 protein_coding retained_intron MGP_129S1SvImJ_T0056659.1 MGP_129S1SvImJ_G0026274.1 mouse_genomes_project 2 114329255 114330194 - MGP_129S1SvImJ_P0056659 Olfr1305 protein_coding protein_coding MGP_129S1SvImJ_T0007439.1 MGP_129S1SvImJ_G0006105.1 mouse_genomes_project 2 185877811 185879750 + 4930591A17Rik lincRNA lincRNA MGP_129S1SvImJ_T0053470.1 MGP_129S1SvImJ_G0025507.1 mouse_genomes_project 2 24992210 24998770 - Slc2a6 protein_coding processed_transcript MGP_129S1SvImJ_T0053471.1 MGP_129S1SvImJ_G0025507.1 mouse_genomes_project 2 24992210 24998794 - Slc2a6 protein_coding processed_transcript MGP_129S1SvImJ_T0053472.1 MGP_129S1SvImJ_G0025507.1 mouse_genomes_project 2 24992210 24998757 - MGP_129S1SvImJ_P0053472 Slc2a6 protein_coding protein_coding MGP_129S1SvImJ_T0053473.1 MGP_129S1SvImJ_G0025507.1 mouse_genomes_project 2 24992210 24998846 - MGP_129S1SvImJ_P0053473 Slc2a6 protein_coding protein_coding MGP_129S1SvImJ_T0053474.1 MGP_129S1SvImJ_G0025507.1 mouse_genomes_project 2 24994915 24996839 - Slc2a6 protein_coding processed_transcript MGP_129S1SvImJ_T0053475.1 MGP_129S1SvImJ_G0025507.1 mouse_genomes_project 2 24996935 24998839 - MGP_129S1SvImJ_P0053475 Slc2a6 protein_coding protein_coding MGP_129S1SvImJ_T0054643.1 MGP_129S1SvImJ_G0025716.1 mouse_genomes_project 2 42746570 43417102 + MGP_129S1SvImJ_P0054643 Arhgap15 protein_coding protein_coding MGP_129S1SvImJ_T0054644.1 MGP_129S1SvImJ_G0025716.1 mouse_genomes_project 2 42746580 43408598 + MGP_129S1SvImJ_P0054644 Arhgap15 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054645.1 MGP_129S1SvImJ_G0025716.1 mouse_genomes_project 2 42746615 42895016 + Arhgap15 protein_coding processed_transcript MGP_129S1SvImJ_T0054646.1 MGP_129S1SvImJ_G0025716.1 mouse_genomes_project 2 42746616 43408602 + MGP_129S1SvImJ_P0054646 Arhgap15 protein_coding protein_coding MGP_129S1SvImJ_T0054647.1 MGP_129S1SvImJ_G0025716.1 mouse_genomes_project 2 43085745 43163086 + Arhgap15 protein_coding processed_transcript MGP_129S1SvImJ_T0054199.1 MGP_129S1SvImJ_G0025619.1 mouse_genomes_project 2 31210265 31246911 + MGP_129S1SvImJ_P0054199 Sh2d3c protein_coding protein_coding MGP_129S1SvImJ_T0054200.1 MGP_129S1SvImJ_G0025619.1 mouse_genomes_project 2 31218666 31235563 + Sh2d3c protein_coding processed_transcript MGP_129S1SvImJ_T0054201.1 MGP_129S1SvImJ_G0025619.1 mouse_genomes_project 2 31218666 31247428 + MGP_129S1SvImJ_P0054201 Sh2d3c protein_coding protein_coding MGP_129S1SvImJ_T0054204.1 MGP_129S1SvImJ_G0025619.1 mouse_genomes_project 2 31226244 31232040 + Sh2d3c protein_coding processed_transcript MGP_129S1SvImJ_T0054205.1 MGP_129S1SvImJ_G0025619.1 mouse_genomes_project 2 31232208 31237783 + Sh2d3c protein_coding processed_transcript MGP_129S1SvImJ_T0054206.1 MGP_129S1SvImJ_G0025619.1 mouse_genomes_project 2 31232210 31234395 + Sh2d3c protein_coding processed_transcript MGP_129S1SvImJ_T0054207.1 MGP_129S1SvImJ_G0025619.1 mouse_genomes_project 2 31232305 31246919 + MGP_129S1SvImJ_P0054207 Sh2d3c protein_coding unknown_likely_coding MGP_129S1SvImJ_T0001123.1 MGP_129S1SvImJ_G0001051.1 mouse_genomes_project 2 161784205 161787553 - TEC TEC MGP_129S1SvImJ_T0017823.1 MGP_129S1SvImJ_G0015431.1 mouse_genomes_project 2 76152568 76157655 + Gm13657 processed_transcript processed_transcript MGP_129S1SvImJ_T0057125.1 MGP_129S1SvImJ_G0026381.1 mouse_genomes_project 2 124012252 124024167 - MGP_129S1SvImJ_P0057125 Lcmt2 protein_coding protein_coding MGP_129S1SvImJ_T0057126.1 MGP_129S1SvImJ_G0026381.1 mouse_genomes_project 2 124021386 124024442 - MGP_129S1SvImJ_P0057126 Lcmt2 protein_coding protein_coding MGP_129S1SvImJ_T0007296.1 MGP_129S1SvImJ_G0005985.1 mouse_genomes_project 2 110459414 110573045 - Gm13912 lincRNA lincRNA MGP_129S1SvImJ_T0056777.1 MGP_129S1SvImJ_G0026313.1 mouse_genomes_project 2 120956165 121058356 - MGP_129S1SvImJ_P0056777 Gpr176 protein_coding protein_coding MGP_129S1SvImJ_T0054289.1 MGP_129S1SvImJ_G0025634.1 mouse_genomes_project 2 31973646 31986853 - MGP_129S1SvImJ_P0054289 Zbtb43 protein_coding protein_coding MGP_129S1SvImJ_T0054290.1 MGP_129S1SvImJ_G0025634.1 mouse_genomes_project 2 31973646 31993020 - MGP_129S1SvImJ_P0054290 Zbtb43 protein_coding protein_coding MGP_129S1SvImJ_T0054291.1 MGP_129S1SvImJ_G0025634.1 mouse_genomes_project 2 31976881 31992993 - MGP_129S1SvImJ_P0054291 Zbtb43 protein_coding protein_coding MGP_129S1SvImJ_T0054292.1 MGP_129S1SvImJ_G0025634.1 mouse_genomes_project 2 31977978 31989582 - MGP_129S1SvImJ_P0054292 Zbtb43 protein_coding protein_coding MGP_129S1SvImJ_T0054293.1 MGP_129S1SvImJ_G0025634.1 mouse_genomes_project 2 31978247 31993047 - MGP_129S1SvImJ_P0054293 Zbtb43 protein_coding protein_coding MGP_129S1SvImJ_T0055749.1 MGP_129S1SvImJ_G0025957.1 mouse_genomes_project 2 86991786 86992731 - MGP_129S1SvImJ_P0055749 Olfr1043 protein_coding protein_coding MGP_129S1SvImJ_T0013740.1 MGP_129S1SvImJ_G0011829.1 mouse_genomes_project 2 114861613 114864878 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055562.1 MGP_129S1SvImJ_G0025886.1 mouse_genomes_project 2 81212058 81229830 + MGP_129S1SvImJ_P0055562 Dusp19 protein_coding protein_coding MGP_129S1SvImJ_T0055563.1 MGP_129S1SvImJ_G0025886.1 mouse_genomes_project 2 81212113 81229899 + Dusp19 protein_coding processed_transcript MGP_129S1SvImJ_T0055564.1 MGP_129S1SvImJ_G0025886.1 mouse_genomes_project 2 81212239 81228993 + Dusp19 protein_coding processed_transcript MGP_129S1SvImJ_T0055565.1 MGP_129S1SvImJ_G0025886.1 mouse_genomes_project 2 81212244 81220060 + Dusp19 protein_coding processed_transcript MGP_129S1SvImJ_T0055567.1 MGP_129S1SvImJ_G0025886.1 mouse_genomes_project 2 81212279 81230530 + Dusp19 protein_coding processed_transcript MGP_129S1SvImJ_T0013541.1 MGP_129S1SvImJ_G0011630.1 mouse_genomes_project 2 50153653 50161250 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0052313.1 MGP_129S1SvImJ_G0025306.1 mouse_genomes_project 2 306187 334000 - MGP_129S1SvImJ_P0052313 Olah protein_coding protein_coding MGP_129S1SvImJ_T0052314.1 MGP_129S1SvImJ_G0025306.1 mouse_genomes_project 2 306190 368237 - MGP_129S1SvImJ_P0052314 Olah protein_coding protein_coding MGP_129S1SvImJ_T0052315.1 MGP_129S1SvImJ_G0025306.1 mouse_genomes_project 2 306222 333978 - MGP_129S1SvImJ_P0052315 Olah protein_coding protein_coding MGP_129S1SvImJ_T0001076.1 MGP_129S1SvImJ_G0001005.1 mouse_genomes_project 2 12581903 12584287 - TEC TEC MGP_129S1SvImJ_T0013445.1 MGP_129S1SvImJ_G0011534.1 mouse_genomes_project 2 12897145 12897941 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017957.1 MGP_129S1SvImJ_G0015496.1 mouse_genomes_project 2 181222790 181225347 - Gm14617 processed_transcript retained_intron MGP_129S1SvImJ_T0017958.1 MGP_129S1SvImJ_G0015496.1 mouse_genomes_project 2 181222917 181227881 - Gm14617 processed_transcript lincRNA MGP_129S1SvImJ_T0017959.1 MGP_129S1SvImJ_G0015496.1 mouse_genomes_project 2 181224769 181227758 - Gm14617 processed_transcript lincRNA MGP_129S1SvImJ_T0055367.1 MGP_129S1SvImJ_G0025843.1 mouse_genomes_project 2 74819629 74881988 - MGP_129S1SvImJ_P0055367 Lnpk1 protein_coding protein_coding MGP_129S1SvImJ_T0055368.1 MGP_129S1SvImJ_G0025843.1 mouse_genomes_project 2 74819672 74881988 - MGP_129S1SvImJ_P0055368 Lnpk1 protein_coding protein_coding MGP_129S1SvImJ_T0055369.1 MGP_129S1SvImJ_G0025843.1 mouse_genomes_project 2 74819679 74832428 - Lnpk1 protein_coding processed_transcript MGP_129S1SvImJ_T0055370.1 MGP_129S1SvImJ_G0025843.1 mouse_genomes_project 2 74820671 74881971 - Lnpk1 protein_coding processed_transcript MGP_129S1SvImJ_T0055371.1 MGP_129S1SvImJ_G0025843.1 mouse_genomes_project 2 74821378 74881264 - MGP_129S1SvImJ_P0055371 Lnpk1 protein_coding protein_coding MGP_129S1SvImJ_T0055372.1 MGP_129S1SvImJ_G0025843.1 mouse_genomes_project 2 74831230 74882419 - MGP_129S1SvImJ_P0055372 Lnpk1 protein_coding protein_coding MGP_129S1SvImJ_T0055373.1 MGP_129S1SvImJ_G0025843.1 mouse_genomes_project 2 74836602 74881557 - MGP_129S1SvImJ_P0055373 Lnpk1 protein_coding protein_coding MGP_129S1SvImJ_T0055374.1 MGP_129S1SvImJ_G0025843.1 mouse_genomes_project 2 74847223 74855793 - Lnpk1 protein_coding processed_transcript MGP_129S1SvImJ_T0055375.1 MGP_129S1SvImJ_G0025843.1 mouse_genomes_project 2 74847849 74882475 - Lnpk1 protein_coding processed_transcript MGP_129S1SvImJ_T0055376.1 MGP_129S1SvImJ_G0025843.1 mouse_genomes_project 2 74850911 74851731 - Lnpk1 protein_coding processed_transcript MGP_129S1SvImJ_T0055377.1 MGP_129S1SvImJ_G0025843.1 mouse_genomes_project 2 74851274 74881956 - Lnpk1 protein_coding processed_transcript MGP_129S1SvImJ_T0055378.1 MGP_129S1SvImJ_G0025843.1 mouse_genomes_project 2 74869923 74881920 - Lnpk1 protein_coding processed_transcript MGP_129S1SvImJ_T0055379.1 MGP_129S1SvImJ_G0025843.1 mouse_genomes_project 2 74870188 74881934 - MGP_129S1SvImJ_P0055379 Lnpk1 protein_coding protein_coding MGP_129S1SvImJ_T0010451.1 MGP_129S1SvImJ_G0008567.1 mouse_genomes_project 2 94920500 94920579 - Mir7001 miRNA miRNA MGP_129S1SvImJ_T0013841.1 MGP_129S1SvImJ_G0011930.1 mouse_genomes_project 2 159487523 159487744 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007343.1 MGP_129S1SvImJ_G0006022.1 mouse_genomes_project 2 139377368 139383294 + lincRNA lincRNA MGP_129S1SvImJ_T0059834.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187902591 187942398 + MGP_129S1SvImJ_P0059834 Rtel1 protein_coding protein_coding MGP_129S1SvImJ_T0059835.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187902605 187933240 + Rtel1 protein_coding retained_intron MGP_129S1SvImJ_T0059836.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187902614 187942360 + Rtel1 protein_coding retained_intron MGP_129S1SvImJ_T0059837.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187902614 187942398 + MGP_129S1SvImJ_P0059837 Rtel1 protein_coding protein_coding MGP_129S1SvImJ_T0059838.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187902637 187942398 + MGP_129S1SvImJ_P0059838 Rtel1 protein_coding protein_coding MGP_129S1SvImJ_T0059839.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187902637 187942398 + MGP_129S1SvImJ_P0059839 Rtel1 protein_coding protein_coding MGP_129S1SvImJ_T0059840.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187902637 187942360 + MGP_129S1SvImJ_P0059840 Rtel1 protein_coding protein_coding MGP_129S1SvImJ_T0059841.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187902651 187942405 + MGP_129S1SvImJ_P0059841 Rtel1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0059842.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187902815 187908622 + MGP_129S1SvImJ_P0059842 Rtel1 protein_coding protein_coding MGP_129S1SvImJ_T0059843.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187913544 187942398 + MGP_129S1SvImJ_P0059843 Rtel1 protein_coding protein_coding MGP_129S1SvImJ_T0059844.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187921894 187932830 + MGP_129S1SvImJ_P0059844 Rtel1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059845.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187925086 187932813 + Rtel1 protein_coding retained_intron MGP_129S1SvImJ_T0059846.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187935236 187935737 + Rtel1 protein_coding retained_intron MGP_129S1SvImJ_T0059847.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187935799 187937845 + Rtel1 protein_coding retained_intron MGP_129S1SvImJ_T0059848.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187935909 187936937 + Rtel1 protein_coding retained_intron MGP_129S1SvImJ_T0059849.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187937863 187941334 + Rtel1 protein_coding retained_intron MGP_129S1SvImJ_T0059850.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187940181 187941595 + Rtel1 protein_coding processed_transcript MGP_129S1SvImJ_T0059851.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187940984 187941799 + Rtel1 protein_coding retained_intron MGP_129S1SvImJ_T0059852.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187941475 187942397 + Rtel1 protein_coding processed_transcript MGP_129S1SvImJ_T0059853.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187941546 187942396 + MGP_129S1SvImJ_P0059853 Rtel1 protein_coding protein_coding MGP_129S1SvImJ_T0059854.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187941751 187942398 + MGP_129S1SvImJ_P0059854 Rtel1 protein_coding protein_coding MGP_129S1SvImJ_T0059855.1 MGP_129S1SvImJ_G0027019.1 mouse_genomes_project 2 187941751 187942398 + MGP_129S1SvImJ_P0059855 Rtel1 protein_coding protein_coding MGP_129S1SvImJ_T0059624.1 MGP_129S1SvImJ_G0026970.1 mouse_genomes_project 2 180825345 180833100 - MGP_129S1SvImJ_P0059624 Slmo2 protein_coding protein_coding MGP_129S1SvImJ_T0059625.1 MGP_129S1SvImJ_G0026970.1 mouse_genomes_project 2 180825953 180833171 - MGP_129S1SvImJ_P0059625 Slmo2 protein_coding protein_coding MGP_129S1SvImJ_T0059626.1 MGP_129S1SvImJ_G0026970.1 mouse_genomes_project 2 180829413 180833128 - Slmo2 protein_coding retained_intron MGP_129S1SvImJ_T0059627.1 MGP_129S1SvImJ_G0026970.1 mouse_genomes_project 2 180829622 180833168 - MGP_129S1SvImJ_P0059627 Slmo2 protein_coding protein_coding MGP_129S1SvImJ_T0056375.1 MGP_129S1SvImJ_G0026194.1 mouse_genomes_project 2 103833688 104082350 - MGP_129S1SvImJ_P0056375 Ldlrad3 protein_coding protein_coding MGP_129S1SvImJ_T0056376.1 MGP_129S1SvImJ_G0026194.1 mouse_genomes_project 2 103833688 104082323 - MGP_129S1SvImJ_P0056376 Ldlrad3 protein_coding protein_coding MGP_129S1SvImJ_T0056377.1 MGP_129S1SvImJ_G0026194.1 mouse_genomes_project 2 104003605 104030038 - Ldlrad3 protein_coding processed_transcript MGP_129S1SvImJ_T0007357.1 MGP_129S1SvImJ_G0006035.1 mouse_genomes_project 2 152254878 152288207 - 9030622O22Rik lincRNA lincRNA MGP_129S1SvImJ_T0007358.1 MGP_129S1SvImJ_G0006035.1 mouse_genomes_project 2 152284745 152355671 - 9030622O22Rik lincRNA lincRNA MGP_129S1SvImJ_T0007359.1 MGP_129S1SvImJ_G0006035.1 mouse_genomes_project 2 152284899 152353738 - 9030622O22Rik lincRNA lincRNA MGP_129S1SvImJ_T0054424.1 MGP_129S1SvImJ_G0025654.1 mouse_genomes_project 2 34011838 34033565 - MGP_129S1SvImJ_P0054424 4930402F06Rik protein_coding protein_coding MGP_129S1SvImJ_T0054425.1 MGP_129S1SvImJ_G0025654.1 mouse_genomes_project 2 34011858 34033447 - MGP_129S1SvImJ_P0054425 4930402F06Rik protein_coding protein_coding MGP_129S1SvImJ_T0013845.1 MGP_129S1SvImJ_G0011934.1 mouse_genomes_project 2 160281886 160282201 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099693.1 MGP_129S1SvImJ_G0037760.1 mouse_genomes_project 2 125387137 125387291 - Gm24409 snRNA snRNA MGP_129S1SvImJ_T0054811.1 MGP_129S1SvImJ_G0025742.1 mouse_genomes_project 2 54880745 55049294 + MGP_129S1SvImJ_P0054811 Kcnj3 protein_coding protein_coding MGP_129S1SvImJ_T0054812.1 MGP_129S1SvImJ_G0025742.1 mouse_genomes_project 2 54881931 55046677 + MGP_129S1SvImJ_P0054812 Kcnj3 protein_coding protein_coding MGP_129S1SvImJ_T0054813.1 MGP_129S1SvImJ_G0025742.1 mouse_genomes_project 2 54881940 55049288 + MGP_129S1SvImJ_P0054813 Kcnj3 protein_coding protein_coding MGP_129S1SvImJ_T0003952.1 MGP_129S1SvImJ_G0003529.1 mouse_genomes_project 2 25117086 25135603 - Dbhos antisense antisense MGP_129S1SvImJ_T0054976.1 MGP_129S1SvImJ_G0025769.1 mouse_genomes_project 2 62010554 62093488 - MGP_129S1SvImJ_P0054976 Dpp4 protein_coding protein_coding MGP_129S1SvImJ_T0054977.1 MGP_129S1SvImJ_G0025769.1 mouse_genomes_project 2 62014920 62025522 - Dpp4 protein_coding retained_intron MGP_129S1SvImJ_T0054978.1 MGP_129S1SvImJ_G0025769.1 mouse_genomes_project 2 62032481 62037934 - Dpp4 protein_coding processed_transcript MGP_129S1SvImJ_T0054979.1 MGP_129S1SvImJ_G0025769.1 mouse_genomes_project 2 62044892 62058428 - Dpp4 protein_coding retained_intron MGP_129S1SvImJ_T0054980.1 MGP_129S1SvImJ_G0025769.1 mouse_genomes_project 2 62054431 62093278 - Dpp4 protein_coding retained_intron MGP_129S1SvImJ_T0054981.1 MGP_129S1SvImJ_G0025769.1 mouse_genomes_project 2 62088949 62093116 - Dpp4 protein_coding processed_transcript MGP_129S1SvImJ_T0017758.1 MGP_129S1SvImJ_G0015391.1 mouse_genomes_project 2 1317922 1331078 - Gm13187 processed_transcript processed_transcript MGP_129S1SvImJ_T0017759.1 MGP_129S1SvImJ_G0015391.1 mouse_genomes_project 2 1321436 1331133 - Gm13187 processed_transcript processed_transcript MGP_129S1SvImJ_T0017760.1 MGP_129S1SvImJ_G0015391.1 mouse_genomes_project 2 1330472 1331133 - Gm13187 processed_transcript processed_transcript MGP_129S1SvImJ_T0056480.1 MGP_129S1SvImJ_G0026212.1 mouse_genomes_project 2 106094386 106094672 - MGP_129S1SvImJ_P0056480 Gm10799 protein_coding protein_coding MGP_129S1SvImJ_T0055878.1 MGP_129S1SvImJ_G0026072.1 mouse_genomes_project 2 90109132 90110068 - MGP_129S1SvImJ_P0055878 Olfr1211 protein_coding protein_coding MGP_129S1SvImJ_T0059106.1 MGP_129S1SvImJ_G0026839.1 mouse_genomes_project 2 169584409 169586342 - MGP_129S1SvImJ_P0059106 Wfdc12 protein_coding protein_coding MGP_129S1SvImJ_T0058588.1 MGP_129S1SvImJ_G0026739.1 mouse_genomes_project 2 160470240 160530038 - MGP_129S1SvImJ_P0058588 Trpc4ap protein_coding protein_coding MGP_129S1SvImJ_T0058589.1 MGP_129S1SvImJ_G0026739.1 mouse_genomes_project 2 160470277 160529986 - MGP_129S1SvImJ_P0058589 Trpc4ap protein_coding protein_coding MGP_129S1SvImJ_T0058590.1 MGP_129S1SvImJ_G0026739.1 mouse_genomes_project 2 160470714 160473712 - Trpc4ap protein_coding processed_transcript MGP_129S1SvImJ_T0058591.1 MGP_129S1SvImJ_G0026739.1 mouse_genomes_project 2 160471565 160473758 - Trpc4ap protein_coding retained_intron MGP_129S1SvImJ_T0058592.1 MGP_129S1SvImJ_G0026739.1 mouse_genomes_project 2 160474951 160510021 - Trpc4ap protein_coding retained_intron MGP_129S1SvImJ_T0058593.1 MGP_129S1SvImJ_G0026739.1 mouse_genomes_project 2 160474958 160476516 - Trpc4ap protein_coding retained_intron MGP_129S1SvImJ_T0058594.1 MGP_129S1SvImJ_G0026739.1 mouse_genomes_project 2 160479590 160500958 - Trpc4ap protein_coding retained_intron MGP_129S1SvImJ_T0058595.1 MGP_129S1SvImJ_G0026739.1 mouse_genomes_project 2 160489182 160530036 - Trpc4ap protein_coding retained_intron MGP_129S1SvImJ_T0058596.1 MGP_129S1SvImJ_G0026739.1 mouse_genomes_project 2 160503043 160505673 - Trpc4ap protein_coding retained_intron MGP_129S1SvImJ_T0058597.1 MGP_129S1SvImJ_G0026739.1 mouse_genomes_project 2 160510026 160529777 - Trpc4ap protein_coding processed_transcript MGP_129S1SvImJ_T0017930.1 MGP_129S1SvImJ_G0015484.1 mouse_genomes_project 2 163425180 163429651 - Snhg17 processed_transcript lincRNA MGP_129S1SvImJ_T0017931.1 MGP_129S1SvImJ_G0015484.1 mouse_genomes_project 2 163428114 163434319 - Snhg17 processed_transcript lincRNA MGP_129S1SvImJ_T0017932.1 MGP_129S1SvImJ_G0015484.1 mouse_genomes_project 2 163428572 163434389 - Snhg17 processed_transcript lincRNA MGP_129S1SvImJ_T0017933.1 MGP_129S1SvImJ_G0015484.1 mouse_genomes_project 2 163428572 163434331 - Snhg17 processed_transcript retained_intron MGP_129S1SvImJ_T0017934.1 MGP_129S1SvImJ_G0015484.1 mouse_genomes_project 2 163428572 163434328 - Snhg17 processed_transcript lincRNA MGP_129S1SvImJ_T0017935.1 MGP_129S1SvImJ_G0015484.1 mouse_genomes_project 2 163428592 163434322 - Snhg17 processed_transcript retained_intron MGP_129S1SvImJ_T0017936.1 MGP_129S1SvImJ_G0015484.1 mouse_genomes_project 2 163428829 163431273 - Snhg17 processed_transcript lincRNA MGP_129S1SvImJ_T0017937.1 MGP_129S1SvImJ_G0015484.1 mouse_genomes_project 2 163432047 163434284 - Snhg17 processed_transcript lincRNA MGP_129S1SvImJ_T0017938.1 MGP_129S1SvImJ_G0015484.1 mouse_genomes_project 2 163433675 163434351 - Snhg17 processed_transcript lincRNA MGP_129S1SvImJ_T0013737.1 MGP_129S1SvImJ_G0011826.1 mouse_genomes_project 2 114277196 114313941 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056761.1 MGP_129S1SvImJ_G0026308.1 mouse_genomes_project 2 119752536 119816171 + MGP_129S1SvImJ_P0056761 Spred1 protein_coding protein_coding MGP_129S1SvImJ_T0056762.1 MGP_129S1SvImJ_G0026308.1 mouse_genomes_project 2 119752800 119806752 + MGP_129S1SvImJ_P0056762 Spred1 protein_coding protein_coding MGP_129S1SvImJ_T0056473.1 MGP_129S1SvImJ_G0026210.1 mouse_genomes_project 2 106049347 106087900 + MGP_129S1SvImJ_P0056473 Fbxo3 protein_coding protein_coding MGP_129S1SvImJ_T0056474.1 MGP_129S1SvImJ_G0026210.1 mouse_genomes_project 2 106049443 106080677 + MGP_129S1SvImJ_P0056474 Fbxo3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0056475.1 MGP_129S1SvImJ_G0026210.1 mouse_genomes_project 2 106049464 106082184 + MGP_129S1SvImJ_P0056475 Fbxo3 protein_coding protein_coding MGP_129S1SvImJ_T0056476.1 MGP_129S1SvImJ_G0026210.1 mouse_genomes_project 2 106049466 106087663 + MGP_129S1SvImJ_P0056476 Fbxo3 protein_coding protein_coding MGP_129S1SvImJ_T0056477.1 MGP_129S1SvImJ_G0026210.1 mouse_genomes_project 2 106049468 106082151 + Fbxo3 protein_coding processed_transcript MGP_129S1SvImJ_T0056478.1 MGP_129S1SvImJ_G0026210.1 mouse_genomes_project 2 106049480 106082165 + MGP_129S1SvImJ_P0056478 Fbxo3 protein_coding protein_coding MGP_129S1SvImJ_T0010406.1 MGP_129S1SvImJ_G0008522.1 mouse_genomes_project 2 27611953 27612033 - Mir133c miRNA miRNA MGP_129S1SvImJ_T0057760.1 MGP_129S1SvImJ_G0026522.1 mouse_genomes_project 2 134644874 134645593 + MGP_129S1SvImJ_P0057760 Gm11037 protein_coding protein_coding MGP_129S1SvImJ_T0052901.1 MGP_129S1SvImJ_G0025406.1 mouse_genomes_project 2 22071572 22075467 + MGP_129S1SvImJ_P0052901 Il1f5 protein_coding protein_coding MGP_129S1SvImJ_T0052902.1 MGP_129S1SvImJ_G0025406.1 mouse_genomes_project 2 22071829 22073637 + Il1f5 protein_coding retained_intron MGP_129S1SvImJ_T0052903.1 MGP_129S1SvImJ_G0025406.1 mouse_genomes_project 2 22071840 22076188 + Il1f5 protein_coding processed_transcript MGP_129S1SvImJ_T0052904.1 MGP_129S1SvImJ_G0025406.1 mouse_genomes_project 2 22072057 22075931 + MGP_129S1SvImJ_P0052904 Il1f5 protein_coding protein_coding MGP_129S1SvImJ_T0053150.1 MGP_129S1SvImJ_G0025446.1 mouse_genomes_project 2 23317203 23337041 + MGP_129S1SvImJ_P0053150 Abca2 protein_coding protein_coding MGP_129S1SvImJ_T0053151.1 MGP_129S1SvImJ_G0025446.1 mouse_genomes_project 2 23329808 23331418 + Abca2 protein_coding processed_transcript MGP_129S1SvImJ_T0053152.1 MGP_129S1SvImJ_G0025446.1 mouse_genomes_project 2 23331448 23332314 + Abca2 protein_coding processed_transcript MGP_129S1SvImJ_T0053153.1 MGP_129S1SvImJ_G0025446.1 mouse_genomes_project 2 23333662 23335366 + Abca2 protein_coding processed_transcript MGP_129S1SvImJ_T0053154.1 MGP_129S1SvImJ_G0025446.1 mouse_genomes_project 2 23334165 23335568 + Abca2 protein_coding processed_transcript MGP_129S1SvImJ_T0053155.1 MGP_129S1SvImJ_G0025446.1 mouse_genomes_project 2 23334322 23335043 + Abca2 protein_coding processed_transcript MGP_129S1SvImJ_T0053156.1 MGP_129S1SvImJ_G0025446.1 mouse_genomes_project 2 23334343 23334977 + Abca2 protein_coding processed_transcript MGP_129S1SvImJ_T0098858.1 MGP_129S1SvImJ_G0036937.1 mouse_genomes_project 2 18707519 18717048 - Gm13380 sense_intronic sense_intronic MGP_129S1SvImJ_T0013524.1 MGP_129S1SvImJ_G0011613.1 mouse_genomes_project 2 39857840 39858193 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053307.1 MGP_129S1SvImJ_G0025482.1 mouse_genomes_project 2 24267923 24296501 + MGP_129S1SvImJ_P0053307 Gpsm1 protein_coding protein_coding MGP_129S1SvImJ_T0053308.1 MGP_129S1SvImJ_G0025482.1 mouse_genomes_project 2 24268000 24296501 + MGP_129S1SvImJ_P0053308 Gpsm1 protein_coding protein_coding MGP_129S1SvImJ_T0053309.1 MGP_129S1SvImJ_G0025482.1 mouse_genomes_project 2 24272180 24296501 + MGP_129S1SvImJ_P0053309 Gpsm1 protein_coding protein_coding MGP_129S1SvImJ_T0053310.1 MGP_129S1SvImJ_G0025482.1 mouse_genomes_project 2 24276008 24296501 + MGP_129S1SvImJ_P0053310 Gpsm1 protein_coding protein_coding MGP_129S1SvImJ_T0053311.1 MGP_129S1SvImJ_G0025482.1 mouse_genomes_project 2 24277750 24280104 + Gpsm1 protein_coding processed_transcript MGP_129S1SvImJ_T0053312.1 MGP_129S1SvImJ_G0025482.1 mouse_genomes_project 2 24278261 24288682 + Gpsm1 protein_coding processed_transcript MGP_129S1SvImJ_T0053313.1 MGP_129S1SvImJ_G0025482.1 mouse_genomes_project 2 24278451 24288152 + Gpsm1 protein_coding processed_transcript MGP_129S1SvImJ_T0053314.1 MGP_129S1SvImJ_G0025482.1 mouse_genomes_project 2 24282801 24296501 + MGP_129S1SvImJ_P0053314 Gpsm1 protein_coding protein_coding MGP_129S1SvImJ_T0053315.1 MGP_129S1SvImJ_G0025482.1 mouse_genomes_project 2 24282844 24288763 + MGP_129S1SvImJ_P0053315 Gpsm1 protein_coding protein_coding MGP_129S1SvImJ_T0053316.1 MGP_129S1SvImJ_G0025482.1 mouse_genomes_project 2 24287662 24293596 + Gpsm1 protein_coding processed_transcript MGP_129S1SvImJ_T0053317.1 MGP_129S1SvImJ_G0025482.1 mouse_genomes_project 2 24287679 24292989 + Gpsm1 protein_coding processed_transcript MGP_129S1SvImJ_T0053318.1 MGP_129S1SvImJ_G0025482.1 mouse_genomes_project 2 24290550 24295537 + Gpsm1 protein_coding processed_transcript MGP_129S1SvImJ_T0053319.1 MGP_129S1SvImJ_G0025482.1 mouse_genomes_project 2 24292502 24295172 + Gpsm1 protein_coding processed_transcript MGP_129S1SvImJ_T0055720.1 MGP_129S1SvImJ_G0025930.1 mouse_genomes_project 2 86436711 86439525 - MGP_129S1SvImJ_P0055720 protein_coding protein_coding MGP_129S1SvImJ_T0052643.1 MGP_129S1SvImJ_G0025355.1 mouse_genomes_project 2 10763888 10992956 - MGP_129S1SvImJ_P0052643 Cubn protein_coding protein_coding MGP_129S1SvImJ_T0052644.1 MGP_129S1SvImJ_G0025355.1 mouse_genomes_project 2 10764278 10992956 - MGP_129S1SvImJ_P0052644 Cubn protein_coding unknown_likely_coding MGP_129S1SvImJ_T0052645.1 MGP_129S1SvImJ_G0025355.1 mouse_genomes_project 2 10918864 10953115 - Cubn protein_coding retained_intron MGP_129S1SvImJ_T0052646.1 MGP_129S1SvImJ_G0025355.1 mouse_genomes_project 2 10954127 10956968 - Cubn protein_coding retained_intron MGP_129S1SvImJ_T0059297.1 MGP_129S1SvImJ_G0026893.1 mouse_genomes_project 2 170952276 170960629 - MGP_129S1SvImJ_P0059297 Ocstamp protein_coding protein_coding MGP_129S1SvImJ_T0003929.1 MGP_129S1SvImJ_G0003513.1 mouse_genomes_project 2 17386422 17389375 - Gm13348 antisense antisense MGP_129S1SvImJ_T0013805.1 MGP_129S1SvImJ_G0011894.1 mouse_genomes_project 2 147894743 147895171 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053484.1 MGP_129S1SvImJ_G0025511.1 mouse_genomes_project 2 25138130 25158943 + MGP_129S1SvImJ_P0053484 Dbh protein_coding protein_coding MGP_129S1SvImJ_T0053485.1 MGP_129S1SvImJ_G0025511.1 mouse_genomes_project 2 25152835 25153115 + Dbh protein_coding processed_transcript MGP_129S1SvImJ_T0013566.1 MGP_129S1SvImJ_G0011655.1 mouse_genomes_project 2 58458810 58459139 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017762.1 MGP_129S1SvImJ_G0015393.1 mouse_genomes_project 2 10758339 10819979 + Gm13270 processed_transcript antisense MGP_129S1SvImJ_T0017763.1 MGP_129S1SvImJ_G0015393.1 mouse_genomes_project 2 10758340 10761123 + Gm13270 processed_transcript retained_intron MGP_129S1SvImJ_T0102390.1 MGP_129S1SvImJ_G0040224.1 mouse_genomes_project 2 35786055 35786309 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0055557.1 MGP_129S1SvImJ_G0025885.1 mouse_genomes_project 2 81083995 81168026 - MGP_129S1SvImJ_P0055557 Nckap1 protein_coding protein_coding MGP_129S1SvImJ_T0055558.1 MGP_129S1SvImJ_G0025885.1 mouse_genomes_project 2 81084001 81168142 - MGP_129S1SvImJ_P0055558 Nckap1 protein_coding protein_coding MGP_129S1SvImJ_T0055559.1 MGP_129S1SvImJ_G0025885.1 mouse_genomes_project 2 81090338 81111931 - Nckap1 protein_coding processed_transcript MGP_129S1SvImJ_T0055560.1 MGP_129S1SvImJ_G0025885.1 mouse_genomes_project 2 81132171 81142119 - Nckap1 protein_coding processed_transcript MGP_129S1SvImJ_T0055561.1 MGP_129S1SvImJ_G0025885.1 mouse_genomes_project 2 81135981 81141839 - Nckap1 protein_coding processed_transcript MGP_129S1SvImJ_T0059046.1 MGP_129S1SvImJ_G0026821.1 mouse_genomes_project 2 168745669 168760425 - MGP_129S1SvImJ_P0059046 Oser1 protein_coding protein_coding MGP_129S1SvImJ_T0059047.1 MGP_129S1SvImJ_G0026821.1 mouse_genomes_project 2 168745700 168771998 - MGP_129S1SvImJ_P0059047 Oser1 protein_coding protein_coding MGP_129S1SvImJ_T0059048.1 MGP_129S1SvImJ_G0026821.1 mouse_genomes_project 2 168746399 168760041 - Oser1 protein_coding processed_transcript MGP_129S1SvImJ_T0059049.1 MGP_129S1SvImJ_G0026821.1 mouse_genomes_project 2 168746433 168752652 - Oser1 protein_coding processed_transcript MGP_129S1SvImJ_T0059050.1 MGP_129S1SvImJ_G0026821.1 mouse_genomes_project 2 168746728 168771998 - Oser1 protein_coding processed_transcript MGP_129S1SvImJ_T0059051.1 MGP_129S1SvImJ_G0026821.1 mouse_genomes_project 2 168746917 168758079 - MGP_129S1SvImJ_P0059051 Oser1 protein_coding protein_coding MGP_129S1SvImJ_T0059052.1 MGP_129S1SvImJ_G0026821.1 mouse_genomes_project 2 168770177 168771851 - Oser1 protein_coding processed_transcript MGP_129S1SvImJ_T0053985.1 MGP_129S1SvImJ_G0025588.1 mouse_genomes_project 2 30029133 30040180 + MGP_129S1SvImJ_P0053985 Exosc2 protein_coding protein_coding MGP_129S1SvImJ_T0053986.1 MGP_129S1SvImJ_G0025588.1 mouse_genomes_project 2 30029137 30039126 + Exosc2 protein_coding retained_intron MGP_129S1SvImJ_T0053987.1 MGP_129S1SvImJ_G0025588.1 mouse_genomes_project 2 30029152 30038665 + MGP_129S1SvImJ_P0053987 Exosc2 protein_coding protein_coding MGP_129S1SvImJ_T0053988.1 MGP_129S1SvImJ_G0025588.1 mouse_genomes_project 2 30029161 30036675 + MGP_129S1SvImJ_P0053988 Exosc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053989.1 MGP_129S1SvImJ_G0025588.1 mouse_genomes_project 2 30031432 30036748 + Exosc2 protein_coding processed_transcript MGP_129S1SvImJ_T0053990.1 MGP_129S1SvImJ_G0025588.1 mouse_genomes_project 2 30036498 30038658 + Exosc2 protein_coding retained_intron MGP_129S1SvImJ_T0007297.1 MGP_129S1SvImJ_G0005986.1 mouse_genomes_project 2 111332256 111335015 + Gm13923 lincRNA lincRNA MGP_129S1SvImJ_T0013607.1 MGP_129S1SvImJ_G0011696.1 mouse_genomes_project 2 73188190 73188487 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058872.1 MGP_129S1SvImJ_G0026783.1 mouse_genomes_project 2 162572287 162582193 - MGP_129S1SvImJ_P0058872 Blcap protein_coding protein_coding MGP_129S1SvImJ_T0058873.1 MGP_129S1SvImJ_G0026783.1 mouse_genomes_project 2 162572287 162582169 - MGP_129S1SvImJ_P0058873 Blcap protein_coding protein_coding MGP_129S1SvImJ_T0058874.1 MGP_129S1SvImJ_G0026783.1 mouse_genomes_project 2 162574029 162589909 - MGP_129S1SvImJ_P0058874 Blcap protein_coding protein_coding MGP_129S1SvImJ_T0058875.1 MGP_129S1SvImJ_G0026783.1 mouse_genomes_project 2 162574115 162575935 - Blcap protein_coding processed_transcript MGP_129S1SvImJ_T0058886.1 MGP_129S1SvImJ_G0026783.1 mouse_genomes_project 2 162581422 162582163 - Blcap protein_coding processed_transcript MGP_129S1SvImJ_T0058887.1 MGP_129S1SvImJ_G0026783.1 mouse_genomes_project 2 162582706 162589909 - Blcap protein_coding processed_transcript MGP_129S1SvImJ_T0056447.1 MGP_129S1SvImJ_G0026207.1 mouse_genomes_project 2 105752127 105793510 - MGP_129S1SvImJ_P0056447 Caprin1 protein_coding protein_coding MGP_129S1SvImJ_T0056448.1 MGP_129S1SvImJ_G0026207.1 mouse_genomes_project 2 105754204 105792965 - MGP_129S1SvImJ_P0056448 Caprin1 protein_coding protein_coding MGP_129S1SvImJ_T0056449.1 MGP_129S1SvImJ_G0026207.1 mouse_genomes_project 2 105756292 105761967 - MGP_129S1SvImJ_P0056449 Caprin1 protein_coding protein_coding MGP_129S1SvImJ_T0056450.1 MGP_129S1SvImJ_G0026207.1 mouse_genomes_project 2 105756997 105760979 - MGP_129S1SvImJ_P0056450 Caprin1 protein_coding protein_coding MGP_129S1SvImJ_T0056451.1 MGP_129S1SvImJ_G0026207.1 mouse_genomes_project 2 105757635 105761870 - Caprin1 protein_coding retained_intron MGP_129S1SvImJ_T0056452.1 MGP_129S1SvImJ_G0026207.1 mouse_genomes_project 2 105760896 105763458 - Caprin1 protein_coding retained_intron MGP_129S1SvImJ_T0056453.1 MGP_129S1SvImJ_G0026207.1 mouse_genomes_project 2 105761934 105762898 - Caprin1 protein_coding processed_transcript MGP_129S1SvImJ_T0056454.1 MGP_129S1SvImJ_G0026207.1 mouse_genomes_project 2 105762183 105768554 - MGP_129S1SvImJ_P0056454 Caprin1 protein_coding protein_coding MGP_129S1SvImJ_T0056455.1 MGP_129S1SvImJ_G0026207.1 mouse_genomes_project 2 105762186 105765194 - Caprin1 protein_coding retained_intron MGP_129S1SvImJ_T0056456.1 MGP_129S1SvImJ_G0026207.1 mouse_genomes_project 2 105762656 105764840 - Caprin1 protein_coding processed_transcript MGP_129S1SvImJ_T0056457.1 MGP_129S1SvImJ_G0026207.1 mouse_genomes_project 2 105767148 105788796 - Caprin1 protein_coding processed_transcript MGP_129S1SvImJ_T0056458.1 MGP_129S1SvImJ_G0026207.1 mouse_genomes_project 2 105768709 105788407 - Caprin1 protein_coding processed_transcript MGP_129S1SvImJ_T0056459.1 MGP_129S1SvImJ_G0026207.1 mouse_genomes_project 2 105773634 105788836 - Caprin1 protein_coding retained_intron MGP_129S1SvImJ_T0056460.1 MGP_129S1SvImJ_G0026207.1 mouse_genomes_project 2 105774032 105788731 - Caprin1 protein_coding processed_transcript MGP_129S1SvImJ_T0056461.1 MGP_129S1SvImJ_G0026207.1 mouse_genomes_project 2 105788314 105793460 - Caprin1 protein_coding retained_intron MGP_129S1SvImJ_T0013651.1 MGP_129S1SvImJ_G0011740.1 mouse_genomes_project 2 87184634 87187563 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055573.1 MGP_129S1SvImJ_G0025889.1 mouse_genomes_project 2 82687645 82908509 + MGP_129S1SvImJ_P0055573 Zfp804a protein_coding protein_coding MGP_129S1SvImJ_T0055574.1 MGP_129S1SvImJ_G0025889.1 mouse_genomes_project 2 82879242 82905958 + Zfp804a protein_coding processed_transcript MGP_129S1SvImJ_T0058892.1 MGP_129S1SvImJ_G0026786.1 mouse_genomes_project 2 162949506 162982279 + MGP_129S1SvImJ_P0058892 Vstm2l protein_coding protein_coding MGP_129S1SvImJ_T0100990.1 MGP_129S1SvImJ_G0039057.1 mouse_genomes_project 2 163431168 163431281 - Gm26003 snoRNA snoRNA MGP_129S1SvImJ_T0057217.1 MGP_129S1SvImJ_G0026392.1 mouse_genomes_project 2 124341941 124347211 - MGP_129S1SvImJ_P0057217 Ell3 protein_coding protein_coding MGP_129S1SvImJ_T0057218.1 MGP_129S1SvImJ_G0026392.1 mouse_genomes_project 2 124341958 124345534 - MGP_129S1SvImJ_P0057218 Ell3 protein_coding protein_coding MGP_129S1SvImJ_T0057220.1 MGP_129S1SvImJ_G0026392.1 mouse_genomes_project 2 124342911 124344084 - Ell3 protein_coding retained_intron MGP_129S1SvImJ_T0013569.1 MGP_129S1SvImJ_G0011658.1 mouse_genomes_project 2 58924655 58925085 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055402.1 MGP_129S1SvImJ_G0025855.1 mouse_genomes_project 2 75151410 75208464 + MGP_129S1SvImJ_P0055402 Mtx2 protein_coding protein_coding MGP_129S1SvImJ_T0055403.1 MGP_129S1SvImJ_G0025855.1 mouse_genomes_project 2 75151437 75194960 + Mtx2 protein_coding retained_intron MGP_129S1SvImJ_T0055404.1 MGP_129S1SvImJ_G0025855.1 mouse_genomes_project 2 75195126 75206537 + Mtx2 protein_coding retained_intron MGP_129S1SvImJ_T0056890.1 MGP_129S1SvImJ_G0026339.1 mouse_genomes_project 2 122016494 122018566 - MGP_129S1SvImJ_P0056890 Rhov protein_coding protein_coding MGP_129S1SvImJ_T0055914.1 MGP_129S1SvImJ_G0026100.1 mouse_genomes_project 2 90731133 90732244 - MGP_129S1SvImJ_P0055914 Olfr1243 protein_coding protein_coding MGP_129S1SvImJ_T0055915.1 MGP_129S1SvImJ_G0026100.1 mouse_genomes_project 2 90731892 90734894 - Olfr1243 protein_coding processed_transcript MGP_129S1SvImJ_T0013762.1 MGP_129S1SvImJ_G0011851.1 mouse_genomes_project 2 130861223 130862073 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004007.1 MGP_129S1SvImJ_G0003573.1 mouse_genomes_project 2 65773754 65783886 - Gm13617 antisense antisense MGP_129S1SvImJ_T0054792.1 MGP_129S1SvImJ_G0025737.1 mouse_genomes_project 2 52227978 52522440 + MGP_129S1SvImJ_P0054792 Fmnl2 protein_coding protein_coding MGP_129S1SvImJ_T0054793.1 MGP_129S1SvImJ_G0025737.1 mouse_genomes_project 2 52227986 52520518 + MGP_129S1SvImJ_P0054793 Fmnl2 protein_coding protein_coding MGP_129S1SvImJ_T0054794.1 MGP_129S1SvImJ_G0025737.1 mouse_genomes_project 2 52227986 52522841 + MGP_129S1SvImJ_P0054794 Fmnl2 protein_coding protein_coding MGP_129S1SvImJ_T0054795.1 MGP_129S1SvImJ_G0025737.1 mouse_genomes_project 2 52503095 52522440 + MGP_129S1SvImJ_P0054795 Fmnl2 protein_coding protein_coding MGP_129S1SvImJ_T0054796.1 MGP_129S1SvImJ_G0025737.1 mouse_genomes_project 2 52508947 52522440 + MGP_129S1SvImJ_P0054796 Fmnl2 protein_coding protein_coding MGP_129S1SvImJ_T0054797.1 MGP_129S1SvImJ_G0025737.1 mouse_genomes_project 2 52514649 52520843 + MGP_129S1SvImJ_P0054797 Fmnl2 protein_coding protein_coding MGP_129S1SvImJ_T0007176.1 MGP_129S1SvImJ_G0005887.1 mouse_genomes_project 2 28776678 28781831 + Gm14487 lincRNA lincRNA MGP_129S1SvImJ_T0058574.1 MGP_129S1SvImJ_G0026737.1 mouse_genomes_project 2 160395711 160428653 - MGP_129S1SvImJ_P0058574 Gss protein_coding protein_coding MGP_129S1SvImJ_T0058575.1 MGP_129S1SvImJ_G0026737.1 mouse_genomes_project 2 160395719 160428557 - MGP_129S1SvImJ_P0058575 Gss protein_coding protein_coding MGP_129S1SvImJ_T0058576.1 MGP_129S1SvImJ_G0026737.1 mouse_genomes_project 2 160396019 160406618 - MGP_129S1SvImJ_P0058576 Gss protein_coding protein_coding MGP_129S1SvImJ_T0058577.1 MGP_129S1SvImJ_G0026737.1 mouse_genomes_project 2 160396741 160408003 - Gss protein_coding retained_intron MGP_129S1SvImJ_T0058580.1 MGP_129S1SvImJ_G0026737.1 mouse_genomes_project 2 160406578 160416265 - MGP_129S1SvImJ_P0058580 Gss protein_coding protein_coding MGP_129S1SvImJ_T0058581.1 MGP_129S1SvImJ_G0026737.1 mouse_genomes_project 2 160410408 160428570 - Gss protein_coding processed_transcript MGP_129S1SvImJ_T0058582.1 MGP_129S1SvImJ_G0026737.1 mouse_genomes_project 2 160411144 160421176 - Gss protein_coding retained_intron MGP_129S1SvImJ_T0058583.1 MGP_129S1SvImJ_G0026737.1 mouse_genomes_project 2 160411215 160428410 - MGP_129S1SvImJ_P0058583 Gss protein_coding protein_coding MGP_129S1SvImJ_T0058584.1 MGP_129S1SvImJ_G0026737.1 mouse_genomes_project 2 160411927 160416257 - Gss protein_coding processed_transcript MGP_129S1SvImJ_T0055600.1 MGP_129S1SvImJ_G0025896.1 mouse_genomes_project 2 84612896 84615509 + MGP_129S1SvImJ_P0055600 protein_coding protein_coding MGP_129S1SvImJ_T0053447.1 MGP_129S1SvImJ_G0025502.1 mouse_genomes_project 2 24891682 24905643 - MGP_129S1SvImJ_P0053447 Surf4 protein_coding protein_coding MGP_129S1SvImJ_T0053448.1 MGP_129S1SvImJ_G0025502.1 mouse_genomes_project 2 24893604 24905026 - MGP_129S1SvImJ_P0053448 Surf4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053449.1 MGP_129S1SvImJ_G0025502.1 mouse_genomes_project 2 24896612 24905496 - MGP_129S1SvImJ_P0053449 Surf4 protein_coding protein_coding MGP_129S1SvImJ_T0054030.1 MGP_129S1SvImJ_G0025596.1 mouse_genomes_project 2 30510270 30526975 + MGP_129S1SvImJ_P0054030 Plpp7 protein_coding protein_coding MGP_129S1SvImJ_T0054031.1 MGP_129S1SvImJ_G0025596.1 mouse_genomes_project 2 30510307 30526281 + MGP_129S1SvImJ_P0054031 Plpp7 protein_coding protein_coding MGP_129S1SvImJ_T0054032.1 MGP_129S1SvImJ_G0025596.1 mouse_genomes_project 2 30510897 30526963 + MGP_129S1SvImJ_P0054032 Plpp7 protein_coding protein_coding MGP_129S1SvImJ_T0013415.1 MGP_129S1SvImJ_G0011504.1 mouse_genomes_project 2 528699 529015 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056492.1 MGP_129S1SvImJ_G0026217.1 mouse_genomes_project 2 106528686 106608009 - MGP_129S1SvImJ_P0056492 Hipk3 protein_coding protein_coding MGP_129S1SvImJ_T0056493.1 MGP_129S1SvImJ_G0026217.1 mouse_genomes_project 2 106531988 106607253 - MGP_129S1SvImJ_P0056493 Hipk3 protein_coding protein_coding MGP_129S1SvImJ_T0056494.1 MGP_129S1SvImJ_G0026217.1 mouse_genomes_project 2 106532062 106607517 - MGP_129S1SvImJ_P0056494 Hipk3 protein_coding protein_coding MGP_129S1SvImJ_T0056495.1 MGP_129S1SvImJ_G0026217.1 mouse_genomes_project 2 106535883 106544318 - Hipk3 protein_coding processed_transcript MGP_129S1SvImJ_T0058821.1 MGP_129S1SvImJ_G0026773.1 mouse_genomes_project 2 161964537 161977053 - MGP_129S1SvImJ_P0058821 Dsn1 protein_coding protein_coding MGP_129S1SvImJ_T0058822.1 MGP_129S1SvImJ_G0026773.1 mouse_genomes_project 2 161964549 161977132 - MGP_129S1SvImJ_P0058822 Dsn1 protein_coding protein_coding MGP_129S1SvImJ_T0058823.1 MGP_129S1SvImJ_G0026773.1 mouse_genomes_project 2 161967728 161977008 - MGP_129S1SvImJ_P0058823 Dsn1 protein_coding protein_coding MGP_129S1SvImJ_T0058824.1 MGP_129S1SvImJ_G0026773.1 mouse_genomes_project 2 161971689 161973234 - Dsn1 protein_coding retained_intron MGP_129S1SvImJ_T0058825.1 MGP_129S1SvImJ_G0026773.1 mouse_genomes_project 2 161972760 161976279 - MGP_129S1SvImJ_P0058825 Dsn1 protein_coding protein_coding MGP_129S1SvImJ_T0058826.1 MGP_129S1SvImJ_G0026773.1 mouse_genomes_project 2 161975297 161976552 - MGP_129S1SvImJ_P0058826 Dsn1 protein_coding protein_coding MGP_129S1SvImJ_T0055154.1 MGP_129S1SvImJ_G0025804.1 mouse_genomes_project 2 69742347 69778959 - MGP_129S1SvImJ_P0055154 Ccdc173 protein_coding protein_coding MGP_129S1SvImJ_T0055155.1 MGP_129S1SvImJ_G0025804.1 mouse_genomes_project 2 69768479 69769543 - Ccdc173 protein_coding processed_transcript MGP_129S1SvImJ_T0011525.1 MGP_129S1SvImJ_G0009641.1 mouse_genomes_project 2 79032436 79032666 - Gm23149 misc_RNA misc_RNA MGP_129S1SvImJ_T0058399.1 MGP_129S1SvImJ_G0026692.1 mouse_genomes_project 2 157979438 158048391 + MGP_129S1SvImJ_P0058399 Asxl1 protein_coding protein_coding MGP_129S1SvImJ_T0058400.1 MGP_129S1SvImJ_G0026692.1 mouse_genomes_project 2 157982362 157993651 + Asxl1 protein_coding processed_transcript MGP_129S1SvImJ_T0058401.1 MGP_129S1SvImJ_G0026692.1 mouse_genomes_project 2 157982490 158033710 + Asxl1 protein_coding processed_transcript MGP_129S1SvImJ_T0058402.1 MGP_129S1SvImJ_G0026692.1 mouse_genomes_project 2 157985654 158044192 + MGP_129S1SvImJ_P0058402 Asxl1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0058403.1 MGP_129S1SvImJ_G0026692.1 mouse_genomes_project 2 158034975 158038953 + Asxl1 protein_coding retained_intron MGP_129S1SvImJ_T0013742.1 MGP_129S1SvImJ_G0011831.1 mouse_genomes_project 2 117195762 117196544 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059573.1 MGP_129S1SvImJ_G0026958.1 mouse_genomes_project 2 179866470 179876162 - MGP_129S1SvImJ_P0059573 Ankrd60 protein_coding protein_coding MGP_129S1SvImJ_T0059574.1 MGP_129S1SvImJ_G0026958.1 mouse_genomes_project 2 179866508 179875995 - MGP_129S1SvImJ_P0059574 Ankrd60 protein_coding protein_coding MGP_129S1SvImJ_T0059575.1 MGP_129S1SvImJ_G0026958.1 mouse_genomes_project 2 179870188 179876070 - Ankrd60 protein_coding processed_transcript MGP_129S1SvImJ_T0013542.1 MGP_129S1SvImJ_G0011631.1 mouse_genomes_project 2 50485608 50486432 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004161.1 MGP_129S1SvImJ_G0003681.1 mouse_genomes_project 2 163253793 163257550 + 1700060C20Rik antisense antisense MGP_129S1SvImJ_T0011517.1 MGP_129S1SvImJ_G0009633.1 mouse_genomes_project 2 44189872 44189933 + Gm27676 misc_RNA misc_RNA MGP_129S1SvImJ_T0013658.1 MGP_129S1SvImJ_G0011747.1 mouse_genomes_project 2 88336135 88336661 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055520.1 MGP_129S1SvImJ_G0025877.1 mouse_genomes_project 2 79872305 79880348 - MGP_129S1SvImJ_P0055520 Cerkl protein_coding protein_coding MGP_129S1SvImJ_T0055521.1 MGP_129S1SvImJ_G0025877.1 mouse_genomes_project 2 79873515 79976934 - Cerkl protein_coding processed_transcript MGP_129S1SvImJ_T0055522.1 MGP_129S1SvImJ_G0025877.1 mouse_genomes_project 2 79874265 79875442 - Cerkl protein_coding processed_transcript MGP_129S1SvImJ_T0055523.1 MGP_129S1SvImJ_G0025877.1 mouse_genomes_project 2 79874293 79976871 - MGP_129S1SvImJ_P0055523 Cerkl protein_coding protein_coding MGP_129S1SvImJ_T0055524.1 MGP_129S1SvImJ_G0025877.1 mouse_genomes_project 2 79874356 79976887 - Cerkl protein_coding processed_transcript MGP_129S1SvImJ_T0055525.1 MGP_129S1SvImJ_G0025877.1 mouse_genomes_project 2 79874356 79976871 - Cerkl protein_coding processed_transcript MGP_129S1SvImJ_T0055526.1 MGP_129S1SvImJ_G0025877.1 mouse_genomes_project 2 79874358 79976977 - Cerkl protein_coding processed_transcript MGP_129S1SvImJ_T0055527.1 MGP_129S1SvImJ_G0025877.1 mouse_genomes_project 2 79880313 80004960 - Cerkl protein_coding processed_transcript MGP_129S1SvImJ_T0055528.1 MGP_129S1SvImJ_G0025877.1 mouse_genomes_project 2 79885737 79919478 - Cerkl protein_coding processed_transcript MGP_129S1SvImJ_T0055529.1 MGP_129S1SvImJ_G0025877.1 mouse_genomes_project 2 79897293 79919503 - Cerkl protein_coding processed_transcript MGP_129S1SvImJ_T0055530.1 MGP_129S1SvImJ_G0025877.1 mouse_genomes_project 2 79935788 79939411 - Cerkl protein_coding processed_transcript MGP_129S1SvImJ_T0055531.1 MGP_129S1SvImJ_G0025877.1 mouse_genomes_project 2 79937120 79941306 - Cerkl protein_coding processed_transcript MGP_129S1SvImJ_T0054594.1 MGP_129S1SvImJ_G0025709.1 mouse_genomes_project 2 37800638 37810548 + Arpc5l protein_coding processed_transcript MGP_129S1SvImJ_T0054595.1 MGP_129S1SvImJ_G0025709.1 mouse_genomes_project 2 37803354 37811099 + MGP_129S1SvImJ_P0054595 Arpc5l protein_coding protein_coding MGP_129S1SvImJ_T0054596.1 MGP_129S1SvImJ_G0025709.1 mouse_genomes_project 2 37803419 37809121 + Arpc5l protein_coding processed_transcript MGP_129S1SvImJ_T0054597.1 MGP_129S1SvImJ_G0025709.1 mouse_genomes_project 2 37803435 37810615 + MGP_129S1SvImJ_P0054597 Arpc5l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054598.1 MGP_129S1SvImJ_G0025709.1 mouse_genomes_project 2 37805296 37811099 + Arpc5l protein_coding processed_transcript MGP_129S1SvImJ_T0003959.1 MGP_129S1SvImJ_G0003535.1 mouse_genomes_project 2 28455036 28456466 - 1700084E18Rik antisense antisense MGP_129S1SvImJ_T0003960.1 MGP_129S1SvImJ_G0003535.1 mouse_genomes_project 2 28455734 28456466 - 1700084E18Rik antisense pseudogene MGP_129S1SvImJ_T0059379.1 MGP_129S1SvImJ_G0026906.1 mouse_genomes_project 2 172713687 172734514 + MGP_129S1SvImJ_P0059379 Ddx27 protein_coding protein_coding MGP_129S1SvImJ_T0059380.1 MGP_129S1SvImJ_G0026906.1 mouse_genomes_project 2 172713804 172725576 + MGP_129S1SvImJ_P0059380 Ddx27 protein_coding protein_coding MGP_129S1SvImJ_T0059381.1 MGP_129S1SvImJ_G0026906.1 mouse_genomes_project 2 172713804 172724294 + MGP_129S1SvImJ_P0059381 Ddx27 protein_coding protein_coding MGP_129S1SvImJ_T0059382.1 MGP_129S1SvImJ_G0026906.1 mouse_genomes_project 2 172725963 172727625 + Ddx27 protein_coding retained_intron MGP_129S1SvImJ_T0059383.1 MGP_129S1SvImJ_G0026906.1 mouse_genomes_project 2 172727304 172728053 + Ddx27 protein_coding retained_intron MGP_129S1SvImJ_T0059384.1 MGP_129S1SvImJ_G0026906.1 mouse_genomes_project 2 172733413 172734470 + Ddx27 protein_coding retained_intron MGP_129S1SvImJ_T0013430.1 MGP_129S1SvImJ_G0011519.1 mouse_genomes_project 2 5894946 5895493 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057276.1 MGP_129S1SvImJ_G0026405.1 mouse_genomes_project 2 125102022 125175213 - MGP_129S1SvImJ_P0057276 Patl2 protein_coding protein_coding MGP_129S1SvImJ_T0010482.1 MGP_129S1SvImJ_G0008598.1 mouse_genomes_project 2 156480914 156481003 - Mir1953 miRNA miRNA MGP_129S1SvImJ_T0055686.1 MGP_129S1SvImJ_G0025917.1 mouse_genomes_project 2 85686620 85689790 + MGP_129S1SvImJ_P0055686 Prg2 protein_coding protein_coding MGP_129S1SvImJ_T0054435.1 MGP_129S1SvImJ_G0025656.1 mouse_genomes_project 2 34204601 34388288 + MGP_129S1SvImJ_P0054435 Dab2ip protein_coding protein_coding MGP_129S1SvImJ_T0054436.1 MGP_129S1SvImJ_G0025656.1 mouse_genomes_project 2 34229159 34388286 + MGP_129S1SvImJ_P0054436 Dab2ip protein_coding protein_coding MGP_129S1SvImJ_T0054437.1 MGP_129S1SvImJ_G0025656.1 mouse_genomes_project 2 34270232 34388286 + MGP_129S1SvImJ_P0054437 Dab2ip protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054438.1 MGP_129S1SvImJ_G0025656.1 mouse_genomes_project 2 34270411 34388290 + MGP_129S1SvImJ_P0054438 Dab2ip protein_coding protein_coding MGP_129S1SvImJ_T0054439.1 MGP_129S1SvImJ_G0025656.1 mouse_genomes_project 2 34270411 34388286 + MGP_129S1SvImJ_P0054439 Dab2ip protein_coding protein_coding MGP_129S1SvImJ_T0054440.1 MGP_129S1SvImJ_G0025656.1 mouse_genomes_project 2 34315672 34366101 + Dab2ip protein_coding retained_intron MGP_129S1SvImJ_T0054441.1 MGP_129S1SvImJ_G0025656.1 mouse_genomes_project 2 34317382 34388288 + MGP_129S1SvImJ_P0054441 Dab2ip protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054442.1 MGP_129S1SvImJ_G0025656.1 mouse_genomes_project 2 34317460 34367187 + Dab2ip protein_coding processed_transcript MGP_129S1SvImJ_T0054443.1 MGP_129S1SvImJ_G0025656.1 mouse_genomes_project 2 34349251 34388286 + MGP_129S1SvImJ_P0054443 Dab2ip protein_coding protein_coding MGP_129S1SvImJ_T0054444.1 MGP_129S1SvImJ_G0025656.1 mouse_genomes_project 2 34349590 34386241 + MGP_129S1SvImJ_P0054444 Dab2ip protein_coding protein_coding MGP_129S1SvImJ_T0054445.1 MGP_129S1SvImJ_G0025656.1 mouse_genomes_project 2 34367580 34388288 + MGP_129S1SvImJ_P0054445 Dab2ip protein_coding protein_coding MGP_129S1SvImJ_T0010447.1 MGP_129S1SvImJ_G0008563.1 mouse_genomes_project 2 93607317 93607415 + Mir1955 miRNA miRNA MGP_129S1SvImJ_T0053099.1 MGP_129S1SvImJ_G0025439.1 mouse_genomes_project 2 23206085 23220870 + MGP_129S1SvImJ_P0053099 Man1b1 protein_coding protein_coding MGP_129S1SvImJ_T0053100.1 MGP_129S1SvImJ_G0025439.1 mouse_genomes_project 2 23206476 23229841 + MGP_129S1SvImJ_P0053100 Man1b1 protein_coding protein_coding MGP_129S1SvImJ_T0053101.1 MGP_129S1SvImJ_G0025439.1 mouse_genomes_project 2 23206509 23222138 + Man1b1 protein_coding processed_transcript MGP_129S1SvImJ_T0053102.1 MGP_129S1SvImJ_G0025439.1 mouse_genomes_project 2 23206520 23211917 + Man1b1 protein_coding processed_transcript MGP_129S1SvImJ_T0053103.1 MGP_129S1SvImJ_G0025439.1 mouse_genomes_project 2 23211860 23222852 + Man1b1 protein_coding processed_transcript MGP_129S1SvImJ_T0053104.1 MGP_129S1SvImJ_G0025439.1 mouse_genomes_project 2 23222586 23223290 + Man1b1 protein_coding processed_transcript MGP_129S1SvImJ_T0099654.1 MGP_129S1SvImJ_G0037721.1 mouse_genomes_project 2 2376317 2376504 - Gm23118 snRNA snRNA MGP_129S1SvImJ_T0055917.1 MGP_129S1SvImJ_G0026102.1 mouse_genomes_project 2 90791592 90792537 - MGP_129S1SvImJ_P0055917 Olfr1246 protein_coding protein_coding MGP_129S1SvImJ_T0059545.1 MGP_129S1SvImJ_G0026950.1 mouse_genomes_project 2 179216875 179234525 + Spo11 protein_coding retained_intron MGP_129S1SvImJ_T0059546.1 MGP_129S1SvImJ_G0026950.1 mouse_genomes_project 2 179219046 179234519 + MGP_129S1SvImJ_P0059546 Spo11 protein_coding protein_coding MGP_129S1SvImJ_T0059547.1 MGP_129S1SvImJ_G0026950.1 mouse_genomes_project 2 179219053 179234521 + MGP_129S1SvImJ_P0059547 Spo11 protein_coding protein_coding MGP_129S1SvImJ_T0059548.1 MGP_129S1SvImJ_G0026950.1 mouse_genomes_project 2 179219053 179234530 + MGP_129S1SvImJ_P0059548 Spo11 protein_coding protein_coding MGP_129S1SvImJ_T0059549.1 MGP_129S1SvImJ_G0026950.1 mouse_genomes_project 2 179226812 179232996 + Spo11 protein_coding processed_transcript MGP_129S1SvImJ_T0007172.1 MGP_129S1SvImJ_G0005885.1 mouse_genomes_project 2 26109042 26141250 + F730016J06Rik lincRNA lincRNA MGP_129S1SvImJ_T0007173.1 MGP_129S1SvImJ_G0005885.1 mouse_genomes_project 2 26109048 26127384 + F730016J06Rik lincRNA lincRNA MGP_129S1SvImJ_T0007174.1 MGP_129S1SvImJ_G0005885.1 mouse_genomes_project 2 26131739 26138740 + F730016J06Rik lincRNA lincRNA MGP_129S1SvImJ_T0007412.1 MGP_129S1SvImJ_G0006081.1 mouse_genomes_project 2 173974285 173979632 - Gm14235 lincRNA lincRNA MGP_129S1SvImJ_T0102403.1 MGP_129S1SvImJ_G0040237.1 mouse_genomes_project 2 86717697 86719039 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0007386.1 MGP_129S1SvImJ_G0006059.1 mouse_genomes_project 2 166425560 166426152 - Gm14242 lincRNA lincRNA MGP_129S1SvImJ_T0017873.1 MGP_129S1SvImJ_G0015457.1 mouse_genomes_project 2 117140868 117185654 + Gm13972 processed_transcript processed_transcript MGP_129S1SvImJ_T0056406.1 MGP_129S1SvImJ_G0026200.1 mouse_genomes_project 2 104971574 105027773 - MGP_129S1SvImJ_P0056406 Pdhx protein_coding protein_coding MGP_129S1SvImJ_T0056407.1 MGP_129S1SvImJ_G0026200.1 mouse_genomes_project 2 104983793 105027595 - MGP_129S1SvImJ_P0056407 Pdhx protein_coding protein_coding MGP_129S1SvImJ_T0056408.1 MGP_129S1SvImJ_G0026200.1 mouse_genomes_project 2 104991455 105027722 - MGP_129S1SvImJ_P0056408 Pdhx protein_coding protein_coding MGP_129S1SvImJ_T0056651.1 MGP_129S1SvImJ_G0026266.1 mouse_genomes_project 2 114005262 114006201 - MGP_129S1SvImJ_P0056651 protein_coding protein_coding MGP_129S1SvImJ_T0057015.1 MGP_129S1SvImJ_G0026366.1 mouse_genomes_project 2 123270731 123291056 + Ganc protein_coding processed_transcript MGP_129S1SvImJ_T0057016.1 MGP_129S1SvImJ_G0026366.1 mouse_genomes_project 2 123271036 123286939 + Ganc protein_coding processed_transcript MGP_129S1SvImJ_T0057017.1 MGP_129S1SvImJ_G0026366.1 mouse_genomes_project 2 123271037 123324852 + Ganc protein_coding processed_transcript MGP_129S1SvImJ_T0057018.1 MGP_129S1SvImJ_G0026366.1 mouse_genomes_project 2 123271045 123291826 + Ganc protein_coding processed_transcript MGP_129S1SvImJ_T0057019.1 MGP_129S1SvImJ_G0026366.1 mouse_genomes_project 2 123271059 123328652 + Ganc protein_coding processed_transcript MGP_129S1SvImJ_T0057020.1 MGP_129S1SvImJ_G0026366.1 mouse_genomes_project 2 123271149 123286937 + Ganc protein_coding processed_transcript MGP_129S1SvImJ_T0057021.1 MGP_129S1SvImJ_G0026366.1 mouse_genomes_project 2 123271173 123283105 + Ganc protein_coding processed_transcript MGP_129S1SvImJ_T0057022.1 MGP_129S1SvImJ_G0026366.1 mouse_genomes_project 2 123271603 123329498 + MGP_129S1SvImJ_P0057022 Ganc protein_coding protein_coding MGP_129S1SvImJ_T0057023.1 MGP_129S1SvImJ_G0026366.1 mouse_genomes_project 2 123271609 123281799 + Ganc protein_coding processed_transcript MGP_129S1SvImJ_T0057024.1 MGP_129S1SvImJ_G0026366.1 mouse_genomes_project 2 123271815 123328663 + Ganc protein_coding processed_transcript MGP_129S1SvImJ_T0057025.1 MGP_129S1SvImJ_G0026366.1 mouse_genomes_project 2 123272960 123328025 + Ganc protein_coding processed_transcript MGP_129S1SvImJ_T0057026.1 MGP_129S1SvImJ_G0026366.1 mouse_genomes_project 2 123279013 123304276 + Ganc protein_coding retained_intron MGP_129S1SvImJ_T0057027.1 MGP_129S1SvImJ_G0026366.1 mouse_genomes_project 2 123290897 123298541 + Ganc protein_coding processed_transcript MGP_129S1SvImJ_T0057028.1 MGP_129S1SvImJ_G0026366.1 mouse_genomes_project 2 123319951 123328147 + Ganc protein_coding retained_intron MGP_129S1SvImJ_T0053476.1 MGP_129S1SvImJ_G0025508.1 mouse_genomes_project 2 25032308 25043263 - MGP_129S1SvImJ_P0053476 Tmem8c protein_coding protein_coding MGP_129S1SvImJ_T0053477.1 MGP_129S1SvImJ_G0025508.1 mouse_genomes_project 2 25032310 25038952 - MGP_129S1SvImJ_P0053477 Tmem8c protein_coding protein_coding MGP_129S1SvImJ_T0059338.1 MGP_129S1SvImJ_G0026900.1 mouse_genomes_project 2 171704548 171790860 - Sulf2 protein_coding processed_transcript MGP_129S1SvImJ_T0059339.1 MGP_129S1SvImJ_G0026900.1 mouse_genomes_project 2 171705068 171706415 - Sulf2 protein_coding retained_intron MGP_129S1SvImJ_T0059340.1 MGP_129S1SvImJ_G0026900.1 mouse_genomes_project 2 171705184 171790091 - MGP_129S1SvImJ_P0059340 Sulf2 protein_coding protein_coding MGP_129S1SvImJ_T0059341.1 MGP_129S1SvImJ_G0026900.1 mouse_genomes_project 2 171705211 171708515 - Sulf2 protein_coding processed_transcript MGP_129S1SvImJ_T0059342.1 MGP_129S1SvImJ_G0026900.1 mouse_genomes_project 2 171723674 171790061 - Sulf2 protein_coding processed_transcript MGP_129S1SvImJ_T0059343.1 MGP_129S1SvImJ_G0026900.1 mouse_genomes_project 2 171767946 171789678 - Sulf2 protein_coding processed_transcript MGP_129S1SvImJ_T0057579.1 MGP_129S1SvImJ_G0026483.1 mouse_genomes_project 2 132475406 132495839 + MGP_129S1SvImJ_P0057579 Polr1b protein_coding protein_coding MGP_129S1SvImJ_T0057580.1 MGP_129S1SvImJ_G0026483.1 mouse_genomes_project 2 132475466 132502327 + MGP_129S1SvImJ_P0057580 Polr1b protein_coding protein_coding MGP_129S1SvImJ_T0057581.1 MGP_129S1SvImJ_G0026483.1 mouse_genomes_project 2 132490835 132493655 + Polr1b protein_coding processed_transcript MGP_129S1SvImJ_T0057582.1 MGP_129S1SvImJ_G0026483.1 mouse_genomes_project 2 132493819 132499369 + Polr1b protein_coding processed_transcript MGP_129S1SvImJ_T0057583.1 MGP_129S1SvImJ_G0026483.1 mouse_genomes_project 2 132496806 132500069 + Polr1b protein_coding processed_transcript MGP_129S1SvImJ_T0013734.1 MGP_129S1SvImJ_G0011823.1 mouse_genomes_project 2 114157131 114158065 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058308.1 MGP_129S1SvImJ_G0026661.1 mouse_genomes_project 2 157018384 157023996 - MGP_129S1SvImJ_P0058308 Defb23 protein_coding protein_coding MGP_129S1SvImJ_T0059064.1 MGP_129S1SvImJ_G0026826.1 mouse_genomes_project 2 168957792 168976223 + MGP_129S1SvImJ_P0059064 Ttpal protein_coding protein_coding MGP_129S1SvImJ_T0059065.1 MGP_129S1SvImJ_G0026826.1 mouse_genomes_project 2 168957800 168973715 + MGP_129S1SvImJ_P0059065 Ttpal protein_coding protein_coding MGP_129S1SvImJ_T0059066.1 MGP_129S1SvImJ_G0026826.1 mouse_genomes_project 2 168957827 168970064 + Ttpal protein_coding retained_intron MGP_129S1SvImJ_T0059067.1 MGP_129S1SvImJ_G0026826.1 mouse_genomes_project 2 168957827 168962730 + MGP_129S1SvImJ_P0059067 Ttpal protein_coding protein_coding MGP_129S1SvImJ_T0059068.1 MGP_129S1SvImJ_G0026826.1 mouse_genomes_project 2 168957829 168976224 + MGP_129S1SvImJ_P0059068 Ttpal protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059069.1 MGP_129S1SvImJ_G0026826.1 mouse_genomes_project 2 168958041 168969109 + MGP_129S1SvImJ_P0059069 Ttpal protein_coding protein_coding MGP_129S1SvImJ_T0059070.1 MGP_129S1SvImJ_G0026826.1 mouse_genomes_project 2 168968701 168972638 + Ttpal protein_coding retained_intron MGP_129S1SvImJ_T0055001.1 MGP_129S1SvImJ_G0025774.1 mouse_genomes_project 2 62396165 62907522 - MGP_129S1SvImJ_P0055001 Kcnh7 protein_coding protein_coding MGP_129S1SvImJ_T0055002.1 MGP_129S1SvImJ_G0025774.1 mouse_genomes_project 2 62499015 62907531 - MGP_129S1SvImJ_P0055002 Kcnh7 protein_coding protein_coding MGP_129S1SvImJ_T0055003.1 MGP_129S1SvImJ_G0025774.1 mouse_genomes_project 2 62499101 62907414 - MGP_129S1SvImJ_P0055003 Kcnh7 protein_coding protein_coding MGP_129S1SvImJ_T0055004.1 MGP_129S1SvImJ_G0025774.1 mouse_genomes_project 2 62904702 62907506 - Kcnh7 protein_coding processed_transcript MGP_129S1SvImJ_T0013646.1 MGP_129S1SvImJ_G0011735.1 mouse_genomes_project 2 84704665 84705036 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007391.1 MGP_129S1SvImJ_G0006064.1 mouse_genomes_project 2 168464351 168470064 - lincRNA lincRNA MGP_129S1SvImJ_T0052576.1 MGP_129S1SvImJ_G0025348.1 mouse_genomes_project 2 9166242 9167321 - Fbxo18 protein_coding processed_transcript MGP_129S1SvImJ_T0052577.1 MGP_129S1SvImJ_G0025348.1 mouse_genomes_project 2 9166244 9207876 - MGP_129S1SvImJ_P0052577 Fbxo18 protein_coding protein_coding MGP_129S1SvImJ_T0052578.1 MGP_129S1SvImJ_G0025348.1 mouse_genomes_project 2 9167336 9172576 - Fbxo18 protein_coding retained_intron MGP_129S1SvImJ_T0052579.1 MGP_129S1SvImJ_G0025348.1 mouse_genomes_project 2 9171196 9207801 - Fbxo18 protein_coding retained_intron MGP_129S1SvImJ_T0052580.1 MGP_129S1SvImJ_G0025348.1 mouse_genomes_project 2 9171783 9186381 - MGP_129S1SvImJ_P0052580 Fbxo18 protein_coding protein_coding MGP_129S1SvImJ_T0052581.1 MGP_129S1SvImJ_G0025348.1 mouse_genomes_project 2 9172801 9175113 - Fbxo18 protein_coding retained_intron MGP_129S1SvImJ_T0052582.1 MGP_129S1SvImJ_G0025348.1 mouse_genomes_project 2 9175022 9187298 - Fbxo18 protein_coding retained_intron MGP_129S1SvImJ_T0052583.1 MGP_129S1SvImJ_G0025348.1 mouse_genomes_project 2 9191756 9207844 - Fbxo18 protein_coding processed_transcript MGP_129S1SvImJ_T0052584.1 MGP_129S1SvImJ_G0025348.1 mouse_genomes_project 2 9193049 9207842 - Fbxo18 protein_coding processed_transcript MGP_129S1SvImJ_T0052585.1 MGP_129S1SvImJ_G0025348.1 mouse_genomes_project 2 9196319 9207801 - Fbxo18 protein_coding processed_transcript MGP_129S1SvImJ_T0058585.1 MGP_129S1SvImJ_G0026738.1 mouse_genomes_project 2 160447066 160470277 + MGP_129S1SvImJ_P0058585 Myh7b protein_coding protein_coding MGP_129S1SvImJ_T0058586.1 MGP_129S1SvImJ_G0026738.1 mouse_genomes_project 2 160464975 160466351 + Myh7b protein_coding processed_transcript MGP_129S1SvImJ_T0058587.1 MGP_129S1SvImJ_G0026738.1 mouse_genomes_project 2 160469420 160470173 + Myh7b protein_coding retained_intron MGP_129S1SvImJ_T0056702.1 MGP_129S1SvImJ_G0026295.1 mouse_genomes_project 2 115762172 115775911 + MGP_129S1SvImJ_P0056702 Tmco5b protein_coding protein_coding MGP_129S1SvImJ_T0098742.1 MGP_129S1SvImJ_G0036827.1 mouse_genomes_project 2 50773356 50773486 - Gm23505 scaRNA scaRNA MGP_129S1SvImJ_T0007229.1 MGP_129S1SvImJ_G0005932.1 mouse_genomes_project 2 72123323 72124639 + Gm13746 lincRNA lincRNA MGP_129S1SvImJ_T0054567.1 MGP_129S1SvImJ_G0025702.1 mouse_genomes_project 2 37270532 37354200 + MGP_129S1SvImJ_P0054567 Nek6 protein_coding protein_coding MGP_129S1SvImJ_T0054568.1 MGP_129S1SvImJ_G0025702.1 mouse_genomes_project 2 37270557 37345893 + MGP_129S1SvImJ_P0054568 Nek6 protein_coding protein_coding MGP_129S1SvImJ_T0054569.1 MGP_129S1SvImJ_G0025702.1 mouse_genomes_project 2 37270703 37344184 + MGP_129S1SvImJ_P0054569 Nek6 protein_coding protein_coding MGP_129S1SvImJ_T0054570.1 MGP_129S1SvImJ_G0025702.1 mouse_genomes_project 2 37273470 37318591 + MGP_129S1SvImJ_P0054570 Nek6 protein_coding protein_coding MGP_129S1SvImJ_T0054571.1 MGP_129S1SvImJ_G0025702.1 mouse_genomes_project 2 37273515 37321671 + MGP_129S1SvImJ_P0054571 Nek6 protein_coding protein_coding MGP_129S1SvImJ_T0007278.1 MGP_129S1SvImJ_G0005970.1 mouse_genomes_project 2 96938537 96942537 + lincRNA lincRNA MGP_129S1SvImJ_T0053598.1 MGP_129S1SvImJ_G0025534.1 mouse_genomes_project 2 26995536 27004266 - MGP_129S1SvImJ_P0053598 Barhl1 protein_coding protein_coding MGP_129S1SvImJ_T0053599.1 MGP_129S1SvImJ_G0025534.1 mouse_genomes_project 2 26995541 27000353 - Barhl1 protein_coding processed_transcript MGP_129S1SvImJ_T0053600.1 MGP_129S1SvImJ_G0025534.1 mouse_genomes_project 2 26996826 27004285 - MGP_129S1SvImJ_P0053600 Barhl1 protein_coding protein_coding MGP_129S1SvImJ_T0053601.1 MGP_129S1SvImJ_G0025534.1 mouse_genomes_project 2 26996826 27004496 - MGP_129S1SvImJ_P0053601 Barhl1 protein_coding protein_coding MGP_129S1SvImJ_T0053602.1 MGP_129S1SvImJ_G0025534.1 mouse_genomes_project 2 26997497 27003359 - Barhl1 protein_coding processed_transcript MGP_129S1SvImJ_T0017962.1 MGP_129S1SvImJ_G0015498.1 mouse_genomes_project 2 187317322 187331037 - Gm14343 processed_transcript processed_transcript MGP_129S1SvImJ_T0055841.1 MGP_129S1SvImJ_G0026037.1 mouse_genomes_project 2 89022374 89023331 - MGP_129S1SvImJ_P0055841 Olfr74 protein_coding protein_coding MGP_129S1SvImJ_T0007196.1 MGP_129S1SvImJ_G0005902.1 mouse_genomes_project 2 44235950 44248709 + Gm28643 lincRNA lincRNA MGP_129S1SvImJ_T0013473.1 MGP_129S1SvImJ_G0011562.1 mouse_genomes_project 2 21451658 21452562 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056967.1 MGP_129S1SvImJ_G0026356.1 mouse_genomes_project 2 122882445 122887659 + MGP_129S1SvImJ_P0056967 Jmjd7 protein_coding protein_coding MGP_129S1SvImJ_T0056969.1 MGP_129S1SvImJ_G0026356.1 mouse_genomes_project 2 122882466 122885603 + MGP_129S1SvImJ_P0056969 Jmjd7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056972.1 MGP_129S1SvImJ_G0026356.1 mouse_genomes_project 2 122882478 122886941 + Jmjd7 protein_coding processed_transcript MGP_129S1SvImJ_T0056973.1 MGP_129S1SvImJ_G0026356.1 mouse_genomes_project 2 122882519 122886458 + Jmjd7 protein_coding processed_transcript MGP_129S1SvImJ_T0056974.1 MGP_129S1SvImJ_G0026356.1 mouse_genomes_project 2 122882556 122885450 + MGP_129S1SvImJ_P0056974 Jmjd7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054364.1 MGP_129S1SvImJ_G0025644.1 mouse_genomes_project 2 33489372 33497255 + Cutal protein_coding retained_intron MGP_129S1SvImJ_T0054365.1 MGP_129S1SvImJ_G0025644.1 mouse_genomes_project 2 33489439 33507233 + MGP_129S1SvImJ_P0054365 Cutal protein_coding protein_coding MGP_129S1SvImJ_T0054015.1 MGP_129S1SvImJ_G0025594.1 mouse_genomes_project 2 30373119 30456721 + MGP_129S1SvImJ_P0054015 Nup214 protein_coding protein_coding MGP_129S1SvImJ_T0054016.1 MGP_129S1SvImJ_G0025594.1 mouse_genomes_project 2 30373169 30380145 + Nup214 protein_coding retained_intron MGP_129S1SvImJ_T0054017.1 MGP_129S1SvImJ_G0025594.1 mouse_genomes_project 2 30379960 30391550 + Nup214 protein_coding processed_transcript MGP_129S1SvImJ_T0054018.1 MGP_129S1SvImJ_G0025594.1 mouse_genomes_project 2 30396901 30400778 + Nup214 protein_coding processed_transcript MGP_129S1SvImJ_T0054019.1 MGP_129S1SvImJ_G0025594.1 mouse_genomes_project 2 30400041 30405942 + MGP_129S1SvImJ_P0054019 Nup214 protein_coding protein_coding MGP_129S1SvImJ_T0054020.1 MGP_129S1SvImJ_G0025594.1 mouse_genomes_project 2 30411563 30412937 + Nup214 protein_coding processed_transcript MGP_129S1SvImJ_T0054021.1 MGP_129S1SvImJ_G0025594.1 mouse_genomes_project 2 30427893 30436203 + Nup214 protein_coding processed_transcript MGP_129S1SvImJ_T0054022.1 MGP_129S1SvImJ_G0025594.1 mouse_genomes_project 2 30438456 30463366 + MGP_129S1SvImJ_P0054022 Nup214 protein_coding protein_coding MGP_129S1SvImJ_T0054023.1 MGP_129S1SvImJ_G0025594.1 mouse_genomes_project 2 30446991 30456717 + MGP_129S1SvImJ_P0054023 Nup214 protein_coding protein_coding MGP_129S1SvImJ_T0054025.1 MGP_129S1SvImJ_G0025594.1 mouse_genomes_project 2 30455344 30457204 + Nup214 protein_coding retained_intron MGP_129S1SvImJ_T0054026.1 MGP_129S1SvImJ_G0025594.1 mouse_genomes_project 2 30456041 30456715 + Nup214 protein_coding retained_intron MGP_129S1SvImJ_T0001093.1 MGP_129S1SvImJ_G0001022.1 mouse_genomes_project 2 36752335 36757682 + TEC TEC MGP_129S1SvImJ_T0052304.1 MGP_129S1SvImJ_G0025302.1 mouse_genomes_project 2 58998 179427 + MGP_129S1SvImJ_P0052304 Fam171a1 protein_coding protein_coding MGP_129S1SvImJ_T0052305.1 MGP_129S1SvImJ_G0025302.1 mouse_genomes_project 2 59141 179984 + MGP_129S1SvImJ_P0052305 Fam171a1 protein_coding protein_coding MGP_129S1SvImJ_T0052306.1 MGP_129S1SvImJ_G0025302.1 mouse_genomes_project 2 59270 179981 + MGP_129S1SvImJ_P0052306 Fam171a1 protein_coding protein_coding MGP_129S1SvImJ_T0007248.1 MGP_129S1SvImJ_G0005946.1 mouse_genomes_project 2 75498104 75528650 - A330043C09Rik lincRNA lincRNA MGP_129S1SvImJ_T0017819.1 MGP_129S1SvImJ_G0015427.1 mouse_genomes_project 2 71907841 71917709 + Gm13662 processed_transcript processed_transcript MGP_129S1SvImJ_T0007423.1 MGP_129S1SvImJ_G0006091.1 mouse_genomes_project 2 175467704 175491498 + Gm14249 lincRNA lincRNA MGP_129S1SvImJ_T0057690.1 MGP_129S1SvImJ_G0026510.1 mouse_genomes_project 2 134056010 134101714 - MGP_129S1SvImJ_P0057690 Ubox5 protein_coding protein_coding MGP_129S1SvImJ_T0057691.1 MGP_129S1SvImJ_G0026510.1 mouse_genomes_project 2 134067100 134101703 - MGP_129S1SvImJ_P0057691 Ubox5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0013794.1 MGP_129S1SvImJ_G0011883.1 mouse_genomes_project 2 143776403 143776831 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013417.1 MGP_129S1SvImJ_G0011506.1 mouse_genomes_project 2 699993 701062 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059071.1 MGP_129S1SvImJ_G0026827.1 mouse_genomes_project 2 168980975 169002617 - MGP_129S1SvImJ_P0059071 Serinc3 protein_coding protein_coding MGP_129S1SvImJ_T0059072.1 MGP_129S1SvImJ_G0026827.1 mouse_genomes_project 2 168994567 169002611 - Serinc3 protein_coding processed_transcript MGP_129S1SvImJ_T0013749.1 MGP_129S1SvImJ_G0011838.1 mouse_genomes_project 2 122271281 122271956 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013495.1 MGP_129S1SvImJ_G0011584.1 mouse_genomes_project 2 33028691 33028947 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059385.1 MGP_129S1SvImJ_G0026907.1 mouse_genomes_project 2 172735386 172762570 - MGP_129S1SvImJ_P0059385 Znfx1 protein_coding protein_coding MGP_129S1SvImJ_T0059386.1 MGP_129S1SvImJ_G0026907.1 mouse_genomes_project 2 172735392 172743092 - MGP_129S1SvImJ_P0059386 Znfx1 protein_coding protein_coding MGP_129S1SvImJ_T0059387.1 MGP_129S1SvImJ_G0026907.1 mouse_genomes_project 2 172743630 172759979 - MGP_129S1SvImJ_P0059387 Znfx1 protein_coding protein_coding MGP_129S1SvImJ_T0059388.1 MGP_129S1SvImJ_G0026907.1 mouse_genomes_project 2 172743715 172762272 - MGP_129S1SvImJ_P0059388 Znfx1 protein_coding protein_coding MGP_129S1SvImJ_T0059389.1 MGP_129S1SvImJ_G0026907.1 mouse_genomes_project 2 172748850 172762195 - Znfx1 protein_coding retained_intron MGP_129S1SvImJ_T0100970.1 MGP_129S1SvImJ_G0039037.1 mouse_genomes_project 2 133724975 133725108 + Gm24451 snoRNA snoRNA MGP_129S1SvImJ_T0053033.1 MGP_129S1SvImJ_G0025424.1 mouse_genomes_project 2 23075500 23076945 - Stpg3 protein_coding processed_transcript MGP_129S1SvImJ_T0053034.1 MGP_129S1SvImJ_G0025424.1 mouse_genomes_project 2 23075501 23077925 - Stpg3 protein_coding processed_transcript MGP_129S1SvImJ_T0053035.1 MGP_129S1SvImJ_G0025424.1 mouse_genomes_project 2 23075852 23077924 - MGP_129S1SvImJ_P0053035 Stpg3 protein_coding protein_coding MGP_129S1SvImJ_T0053036.1 MGP_129S1SvImJ_G0025424.1 mouse_genomes_project 2 23076055 23077931 - MGP_129S1SvImJ_P0053036 Stpg3 protein_coding protein_coding MGP_129S1SvImJ_T0053037.1 MGP_129S1SvImJ_G0025424.1 mouse_genomes_project 2 23076211 23077885 - Stpg3 protein_coding processed_transcript MGP_129S1SvImJ_T0001081.1 MGP_129S1SvImJ_G0001010.1 mouse_genomes_project 2 22712512 22714310 - TEC TEC MGP_129S1SvImJ_T0056252.1 MGP_129S1SvImJ_G0026171.1 mouse_genomes_project 2 94390624 94432775 + MGP_129S1SvImJ_P0056252 Syt13 protein_coding protein_coding MGP_129S1SvImJ_T0003954.1 MGP_129S1SvImJ_G0003531.1 mouse_genomes_project 2 25303335 25307929 + AA645442 antisense antisense MGP_129S1SvImJ_T0099686.1 MGP_129S1SvImJ_G0037753.1 mouse_genomes_project 2 104840472 104840579 + Gm23731 snRNA snRNA MGP_129S1SvImJ_T0057357.1 MGP_129S1SvImJ_G0026426.1 mouse_genomes_project 2 128316573 128400680 + MGP_129S1SvImJ_P0057357 Slc12a1 protein_coding protein_coding MGP_129S1SvImJ_T0057358.1 MGP_129S1SvImJ_G0026426.1 mouse_genomes_project 2 128316648 128332813 + Slc12a1 protein_coding retained_intron MGP_129S1SvImJ_T0057359.1 MGP_129S1SvImJ_G0026426.1 mouse_genomes_project 2 128316668 128400677 + MGP_129S1SvImJ_P0057359 Slc12a1 protein_coding protein_coding MGP_129S1SvImJ_T0057360.1 MGP_129S1SvImJ_G0026426.1 mouse_genomes_project 2 128316668 128400680 + MGP_129S1SvImJ_P0057360 Slc12a1 protein_coding protein_coding MGP_129S1SvImJ_T0013881.1 MGP_129S1SvImJ_G0011970.1 mouse_genomes_project 2 172795628 172795826 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055840.1 MGP_129S1SvImJ_G0026036.1 mouse_genomes_project 2 89009429 89010368 - MGP_129S1SvImJ_P0055840 Olfr1157 protein_coding protein_coding MGP_129S1SvImJ_T0011512.1 MGP_129S1SvImJ_G0009628.1 mouse_genomes_project 2 22420296 22420621 + Gm25455 misc_RNA misc_RNA MGP_129S1SvImJ_T0054798.1 MGP_129S1SvImJ_G0025738.1 mouse_genomes_project 2 52523341 52580858 - MGP_129S1SvImJ_P0054798 Prpf40a protein_coding protein_coding MGP_129S1SvImJ_T0054799.1 MGP_129S1SvImJ_G0025738.1 mouse_genomes_project 2 52527816 52533962 - Prpf40a protein_coding processed_transcript MGP_129S1SvImJ_T0054800.1 MGP_129S1SvImJ_G0025738.1 mouse_genomes_project 2 52541744 52580917 - MGP_129S1SvImJ_P0054800 Prpf40a protein_coding protein_coding MGP_129S1SvImJ_T0054801.1 MGP_129S1SvImJ_G0025738.1 mouse_genomes_project 2 52562023 52580837 - Prpf40a protein_coding processed_transcript MGP_129S1SvImJ_T0054802.1 MGP_129S1SvImJ_G0025738.1 mouse_genomes_project 2 52565796 52580858 - Prpf40a protein_coding processed_transcript MGP_129S1SvImJ_T0056129.1 MGP_129S1SvImJ_G0026151.1 mouse_genomes_project 2 92872269 92969224 + MGP_129S1SvImJ_P0056129 Ckap5 protein_coding protein_coding MGP_129S1SvImJ_T0056130.1 MGP_129S1SvImJ_G0026151.1 mouse_genomes_project 2 92872485 92901592 + Ckap5 protein_coding processed_transcript MGP_129S1SvImJ_T0056131.1 MGP_129S1SvImJ_G0026151.1 mouse_genomes_project 2 92890668 92911396 + Ckap5 protein_coding retained_intron MGP_129S1SvImJ_T0056132.1 MGP_129S1SvImJ_G0026151.1 mouse_genomes_project 2 92890670 92969222 + MGP_129S1SvImJ_P0056132 Ckap5 protein_coding protein_coding MGP_129S1SvImJ_T0056133.1 MGP_129S1SvImJ_G0026151.1 mouse_genomes_project 2 92890670 92969222 + MGP_129S1SvImJ_P0056133 Ckap5 protein_coding protein_coding MGP_129S1SvImJ_T0056134.1 MGP_129S1SvImJ_G0026151.1 mouse_genomes_project 2 92890681 92969223 + MGP_129S1SvImJ_P0056134 Ckap5 protein_coding protein_coding MGP_129S1SvImJ_T0056135.1 MGP_129S1SvImJ_G0026151.1 mouse_genomes_project 2 92901467 92911399 + Ckap5 protein_coding retained_intron MGP_129S1SvImJ_T0056136.1 MGP_129S1SvImJ_G0026151.1 mouse_genomes_project 2 92942867 92955170 + Ckap5 protein_coding processed_transcript MGP_129S1SvImJ_T0056137.1 MGP_129S1SvImJ_G0026151.1 mouse_genomes_project 2 92944190 92948796 + Ckap5 protein_coding retained_intron MGP_129S1SvImJ_T0054501.1 MGP_129S1SvImJ_G0025685.1 mouse_genomes_project 2 35742772 35746329 + MGP_129S1SvImJ_P0054501 Olfr360 protein_coding protein_coding MGP_129S1SvImJ_T0054502.1 MGP_129S1SvImJ_G0025685.1 mouse_genomes_project 2 35745375 35746329 + MGP_129S1SvImJ_P0054502 Olfr360 protein_coding protein_coding MGP_129S1SvImJ_T0055384.1 MGP_129S1SvImJ_G0025847.1 mouse_genomes_project 2 74993756 75001219 + Hoxd11 protein_coding processed_transcript MGP_129S1SvImJ_T0055385.1 MGP_129S1SvImJ_G0025847.1 mouse_genomes_project 2 74996522 74998372 + MGP_129S1SvImJ_P0055385 Hoxd11 protein_coding protein_coding MGP_129S1SvImJ_T0004127.1 MGP_129S1SvImJ_G0003652.1 mouse_genomes_project 2 147566680 147582219 - Pcsk2os1 antisense antisense MGP_129S1SvImJ_T0004128.1 MGP_129S1SvImJ_G0003652.1 mouse_genomes_project 2 147569172 147577160 - Pcsk2os1 antisense antisense MGP_129S1SvImJ_T0004054.1 MGP_129S1SvImJ_G0003604.1 mouse_genomes_project 2 94899604 94913849 + Gm13807 antisense antisense MGP_129S1SvImJ_T0007251.1 MGP_129S1SvImJ_G0005949.1 mouse_genomes_project 2 76099303 76099882 - Gm13656 lincRNA lincRNA MGP_129S1SvImJ_T0007261.1 MGP_129S1SvImJ_G0005957.1 mouse_genomes_project 2 85184856 85210598 - Gm13710 lincRNA lincRNA MGP_129S1SvImJ_T0010359.1 MGP_129S1SvImJ_G0008475.1 mouse_genomes_project 2 7825308 7825406 + Mir669l miRNA miRNA MGP_129S1SvImJ_T0055819.1 MGP_129S1SvImJ_G0026017.1 mouse_genomes_project 2 88710151 88711214 - MGP_129S1SvImJ_P0055819 protein_coding protein_coding MGP_129S1SvImJ_T0004018.1 MGP_129S1SvImJ_G0003582.1 mouse_genomes_project 2 71634754 71646217 - Dlx1as antisense antisense MGP_129S1SvImJ_T0004019.1 MGP_129S1SvImJ_G0003582.1 mouse_genomes_project 2 71642331 71646225 - Dlx1as antisense antisense MGP_129S1SvImJ_T0004020.1 MGP_129S1SvImJ_G0003582.1 mouse_genomes_project 2 71646136 71657247 - Dlx1as antisense antisense MGP_129S1SvImJ_T0004021.1 MGP_129S1SvImJ_G0003582.1 mouse_genomes_project 2 71651053 71657328 - Dlx1as antisense antisense MGP_129S1SvImJ_T0055037.1 MGP_129S1SvImJ_G0025779.1 mouse_genomes_project 2 65269685 65387399 - MGP_129S1SvImJ_P0055037 protein_coding protein_coding MGP_129S1SvImJ_T0055038.1 MGP_129S1SvImJ_G0025779.1 mouse_genomes_project 2 65270830 65387542 - MGP_129S1SvImJ_P0055038 protein_coding protein_coding MGP_129S1SvImJ_T0055039.1 MGP_129S1SvImJ_G0025779.1 mouse_genomes_project 2 65308285 65315069 - protein_coding processed_transcript MGP_129S1SvImJ_T0055040.1 MGP_129S1SvImJ_G0025779.1 mouse_genomes_project 2 65344295 65348938 - MGP_129S1SvImJ_P0055040 protein_coding protein_coding MGP_129S1SvImJ_T0053051.1 MGP_129S1SvImJ_G0025429.1 mouse_genomes_project 2 23106615 23107786 - MGP_129S1SvImJ_P0053051 Cysrt1 protein_coding protein_coding MGP_129S1SvImJ_T0053052.1 MGP_129S1SvImJ_G0025429.1 mouse_genomes_project 2 23106786 23107695 - MGP_129S1SvImJ_P0053052 Cysrt1 protein_coding protein_coding MGP_129S1SvImJ_T0053053.1 MGP_129S1SvImJ_G0025429.1 mouse_genomes_project 2 23106954 23110250 - MGP_129S1SvImJ_P0053053 Cysrt1 protein_coding protein_coding MGP_129S1SvImJ_T0003921.1 MGP_129S1SvImJ_G0003506.1 mouse_genomes_project 2 11183044 11184963 + Gm37126 antisense antisense MGP_129S1SvImJ_T0007433.1 MGP_129S1SvImJ_G0006099.1 mouse_genomes_project 2 178130623 178131624 - Gm14272 lincRNA lincRNA MGP_129S1SvImJ_T0057356.1 MGP_129S1SvImJ_G0026425.1 mouse_genomes_project 2 128300724 128311502 + MGP_129S1SvImJ_P0057356 Ctxn2 protein_coding protein_coding MGP_129S1SvImJ_T0011510.1 MGP_129S1SvImJ_G0009626.1 mouse_genomes_project 2 19014393 19014570 - Gm23007 misc_RNA misc_RNA MGP_129S1SvImJ_T0053273.1 MGP_129S1SvImJ_G0025475.1 mouse_genomes_project 2 23860326 23920771 - MGP_129S1SvImJ_P0053273 Camsap1 protein_coding protein_coding MGP_129S1SvImJ_T0053274.1 MGP_129S1SvImJ_G0025475.1 mouse_genomes_project 2 23863895 23868567 - Camsap1 protein_coding processed_transcript MGP_129S1SvImJ_T0053275.1 MGP_129S1SvImJ_G0025475.1 mouse_genomes_project 2 23878966 23903287 - MGP_129S1SvImJ_P0053275 Camsap1 protein_coding protein_coding MGP_129S1SvImJ_T0053276.1 MGP_129S1SvImJ_G0025475.1 mouse_genomes_project 2 23878985 23900350 - MGP_129S1SvImJ_P0053276 Camsap1 protein_coding protein_coding MGP_129S1SvImJ_T0053277.1 MGP_129S1SvImJ_G0025475.1 mouse_genomes_project 2 23879159 23903195 - MGP_129S1SvImJ_P0053277 Camsap1 protein_coding protein_coding MGP_129S1SvImJ_T0053278.1 MGP_129S1SvImJ_G0025475.1 mouse_genomes_project 2 23890205 23920697 - MGP_129S1SvImJ_P0053278 Camsap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053279.1 MGP_129S1SvImJ_G0025475.1 mouse_genomes_project 2 23900343 23920545 - MGP_129S1SvImJ_P0053279 Camsap1 protein_coding protein_coding MGP_129S1SvImJ_T0059115.1 MGP_129S1SvImJ_G0026845.1 mouse_genomes_project 2 169695489 169697912 - MGP_129S1SvImJ_P0059115 Svs4 protein_coding protein_coding MGP_129S1SvImJ_T0007294.1 MGP_129S1SvImJ_G0005983.1 mouse_genomes_project 2 108686797 108746556 - Gm14015 lincRNA lincRNA MGP_129S1SvImJ_T0004210.1 MGP_129S1SvImJ_G0003716.1 mouse_genomes_project 2 187521644 187535367 + Gm14341 antisense antisense MGP_129S1SvImJ_T0102414.1 MGP_129S1SvImJ_G0040248.1 mouse_genomes_project 2 87573569 87574511 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0057278.1 MGP_129S1SvImJ_G0026407.1 mouse_genomes_project 2 125145994 125166686 + MGP_129S1SvImJ_P0057278 Trim69 protein_coding protein_coding MGP_129S1SvImJ_T0057279.1 MGP_129S1SvImJ_G0026407.1 mouse_genomes_project 2 125146096 125166683 + Trim69 protein_coding processed_transcript MGP_129S1SvImJ_T0001044.1 MGP_129S1SvImJ_G0000973.1 mouse_genomes_project 2 3647945 3651994 + TEC TEC MGP_129S1SvImJ_T0059986.1 MGP_129S1SvImJ_G0027039.1 mouse_genomes_project 2 188495706 188502200 + MGP_129S1SvImJ_P0059986 Polr3k protein_coding protein_coding MGP_129S1SvImJ_T0059987.1 MGP_129S1SvImJ_G0027039.1 mouse_genomes_project 2 188495729 188497579 + Polr3k protein_coding retained_intron MGP_129S1SvImJ_T0052774.1 MGP_129S1SvImJ_G0025378.1 mouse_genomes_project 2 16565749 16723286 - MGP_129S1SvImJ_P0052774 Pip4k2a protein_coding protein_coding MGP_129S1SvImJ_T0052775.1 MGP_129S1SvImJ_G0025378.1 mouse_genomes_project 2 16567865 16589574 - MGP_129S1SvImJ_P0052775 Pip4k2a protein_coding protein_coding MGP_129S1SvImJ_T0052776.1 MGP_129S1SvImJ_G0025378.1 mouse_genomes_project 2 16570950 16627546 - MGP_129S1SvImJ_P0052776 Pip4k2a protein_coding protein_coding MGP_129S1SvImJ_T0007275.1 MGP_129S1SvImJ_G0005968.1 mouse_genomes_project 2 95790702 95805033 - lincRNA lincRNA MGP_129S1SvImJ_T0007276.1 MGP_129S1SvImJ_G0005968.1 mouse_genomes_project 2 95799826 95805052 - lincRNA lincRNA MGP_129S1SvImJ_T0058850.1 MGP_129S1SvImJ_G0026779.1 mouse_genomes_project 2 162274286 162286013 + Rpn2 protein_coding processed_transcript MGP_129S1SvImJ_T0058851.1 MGP_129S1SvImJ_G0026779.1 mouse_genomes_project 2 162274328 162322786 + MGP_129S1SvImJ_P0058851 Rpn2 protein_coding protein_coding MGP_129S1SvImJ_T0058852.1 MGP_129S1SvImJ_G0026779.1 mouse_genomes_project 2 162274415 162322786 + MGP_129S1SvImJ_P0058852 Rpn2 protein_coding protein_coding MGP_129S1SvImJ_T0058853.1 MGP_129S1SvImJ_G0026779.1 mouse_genomes_project 2 162274695 162322523 + Rpn2 protein_coding processed_transcript MGP_129S1SvImJ_T0058854.1 MGP_129S1SvImJ_G0026779.1 mouse_genomes_project 2 162274838 162287163 + Rpn2 protein_coding processed_transcript MGP_129S1SvImJ_T0058855.1 MGP_129S1SvImJ_G0026779.1 mouse_genomes_project 2 162277208 162287044 + Rpn2 protein_coding processed_transcript MGP_129S1SvImJ_T0058856.1 MGP_129S1SvImJ_G0026779.1 mouse_genomes_project 2 162280034 162322202 + Rpn2 protein_coding processed_transcript MGP_129S1SvImJ_T0058857.1 MGP_129S1SvImJ_G0026779.1 mouse_genomes_project 2 162291293 162291805 + Rpn2 protein_coding processed_transcript MGP_129S1SvImJ_T0058858.1 MGP_129S1SvImJ_G0026779.1 mouse_genomes_project 2 162311026 162312684 + Rpn2 protein_coding processed_transcript MGP_129S1SvImJ_T0058859.1 MGP_129S1SvImJ_G0026779.1 mouse_genomes_project 2 162312652 162318944 + Rpn2 protein_coding retained_intron MGP_129S1SvImJ_T0058860.1 MGP_129S1SvImJ_G0026779.1 mouse_genomes_project 2 162316255 162318633 + Rpn2 protein_coding retained_intron MGP_129S1SvImJ_T0057822.1 MGP_129S1SvImJ_G0026535.1 mouse_genomes_project 2 135470005 135511264 + MGP_129S1SvImJ_P0057822 Prn protein_coding protein_coding MGP_129S1SvImJ_T0057823.1 MGP_129S1SvImJ_G0026535.1 mouse_genomes_project 2 135470005 135511264 + MGP_129S1SvImJ_P0057823 Prn protein_coding protein_coding MGP_129S1SvImJ_T0057868.1 MGP_129S1SvImJ_G0026544.1 mouse_genomes_project 2 136299319 136372371 + MGP_129S1SvImJ_P0057868 1110034G24Rik protein_coding protein_coding MGP_129S1SvImJ_T0057869.1 MGP_129S1SvImJ_G0026544.1 mouse_genomes_project 2 136302546 136371819 + MGP_129S1SvImJ_P0057869 1110034G24Rik protein_coding protein_coding MGP_129S1SvImJ_T0057870.1 MGP_129S1SvImJ_G0026544.1 mouse_genomes_project 2 136302672 136372371 + MGP_129S1SvImJ_P0057870 1110034G24Rik protein_coding protein_coding MGP_129S1SvImJ_T0057871.1 MGP_129S1SvImJ_G0026544.1 mouse_genomes_project 2 136311077 136371898 + 1110034G24Rik protein_coding processed_transcript MGP_129S1SvImJ_T0053962.1 MGP_129S1SvImJ_G0025584.1 mouse_genomes_project 2 29633526 29782681 + MGP_129S1SvImJ_P0053962 Hmcn2 protein_coding protein_coding MGP_129S1SvImJ_T0053963.1 MGP_129S1SvImJ_G0025584.1 mouse_genomes_project 2 29633526 29782684 + MGP_129S1SvImJ_P0053963 Hmcn2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0053964.1 MGP_129S1SvImJ_G0025584.1 mouse_genomes_project 2 29722151 29727689 + MGP_129S1SvImJ_P0053964 Hmcn2 protein_coding protein_coding MGP_129S1SvImJ_T0053965.1 MGP_129S1SvImJ_G0025584.1 mouse_genomes_project 2 29759812 29782667 + Hmcn2 protein_coding retained_intron MGP_129S1SvImJ_T0053966.1 MGP_129S1SvImJ_G0025584.1 mouse_genomes_project 2 29768483 29782680 + Hmcn2 protein_coding processed_transcript MGP_129S1SvImJ_T0053967.1 MGP_129S1SvImJ_G0025584.1 mouse_genomes_project 2 29776651 29779934 + Hmcn2 protein_coding retained_intron MGP_129S1SvImJ_T0056340.1 MGP_129S1SvImJ_G0026186.1 mouse_genomes_project 2 95962891 95989730 - MGP_129S1SvImJ_P0056340 Api5 protein_coding protein_coding MGP_129S1SvImJ_T0056341.1 MGP_129S1SvImJ_G0026186.1 mouse_genomes_project 2 95970046 95989706 - Api5 protein_coding processed_transcript MGP_129S1SvImJ_T0056342.1 MGP_129S1SvImJ_G0026186.1 mouse_genomes_project 2 95974124 95989874 - Api5 protein_coding retained_intron MGP_129S1SvImJ_T0056343.1 MGP_129S1SvImJ_G0026186.1 mouse_genomes_project 2 95978868 95983721 - Api5 protein_coding processed_transcript MGP_129S1SvImJ_T0013904.1 MGP_129S1SvImJ_G0011993.1 mouse_genomes_project 2 187874470 187875109 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056193.1 MGP_129S1SvImJ_G0026161.1 mouse_genomes_project 2 93329487 93331440 + MGP_129S1SvImJ_P0056193 Gm9821 protein_coding protein_coding MGP_129S1SvImJ_T0013579.1 MGP_129S1SvImJ_G0011668.1 mouse_genomes_project 2 61378631 61379330 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102407.1 MGP_129S1SvImJ_G0040241.1 mouse_genomes_project 2 87244836 87245776 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0055668.1 MGP_129S1SvImJ_G0025912.1 mouse_genomes_project 2 85508914 85520388 - MGP_129S1SvImJ_P0055668 Smtnl1 protein_coding protein_coding MGP_129S1SvImJ_T0057095.1 MGP_129S1SvImJ_G0026375.1 mouse_genomes_project 2 123726709 123843022 - MGP_129S1SvImJ_P0057095 Ubr1 protein_coding protein_coding MGP_129S1SvImJ_T0057096.1 MGP_129S1SvImJ_G0026375.1 mouse_genomes_project 2 123729014 123738054 - Ubr1 protein_coding processed_transcript MGP_129S1SvImJ_T0057097.1 MGP_129S1SvImJ_G0026375.1 mouse_genomes_project 2 123739577 123758459 - Ubr1 protein_coding processed_transcript MGP_129S1SvImJ_T0057098.1 MGP_129S1SvImJ_G0026375.1 mouse_genomes_project 2 123770275 123783816 - Ubr1 protein_coding processed_transcript MGP_129S1SvImJ_T0057099.1 MGP_129S1SvImJ_G0026375.1 mouse_genomes_project 2 123790386 123801645 - Ubr1 protein_coding processed_transcript MGP_129S1SvImJ_T0057100.1 MGP_129S1SvImJ_G0026375.1 mouse_genomes_project 2 123816698 123842920 - Ubr1 protein_coding retained_intron MGP_129S1SvImJ_T0057101.1 MGP_129S1SvImJ_G0026375.1 mouse_genomes_project 2 123834458 123842999 - Ubr1 protein_coding retained_intron MGP_129S1SvImJ_T0013669.1 MGP_129S1SvImJ_G0011758.1 mouse_genomes_project 2 89693627 89707269 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010484.1 MGP_129S1SvImJ_G0008600.1 mouse_genomes_project 2 160170652 160170761 + Mir695 miRNA miRNA MGP_129S1SvImJ_T0102398.1 MGP_129S1SvImJ_G0040232.1 mouse_genomes_project 2 86375505 86376436 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0011540.1 MGP_129S1SvImJ_G0009656.1 mouse_genomes_project 2 161806118 161806362 + Gm27651 misc_RNA misc_RNA MGP_129S1SvImJ_T0098857.1 MGP_129S1SvImJ_G0036936.1 mouse_genomes_project 2 4139133 4140361 - Gm10115 sense_intronic sense_intronic MGP_129S1SvImJ_T0055433.1 MGP_129S1SvImJ_G0025866.1 mouse_genomes_project 2 77024842 77042783 - MGP_129S1SvImJ_P0055433 Prkra protein_coding protein_coding MGP_129S1SvImJ_T0055434.1 MGP_129S1SvImJ_G0025866.1 mouse_genomes_project 2 77031592 77035531 - Prkra protein_coding processed_transcript MGP_129S1SvImJ_T0055661.1 MGP_129S1SvImJ_G0025910.1 mouse_genomes_project 2 85455493 85465361 - MGP_129S1SvImJ_P0055661 Serping1 protein_coding protein_coding MGP_129S1SvImJ_T0055662.1 MGP_129S1SvImJ_G0025910.1 mouse_genomes_project 2 85455612 85465401 - MGP_129S1SvImJ_P0055662 Serping1 protein_coding protein_coding MGP_129S1SvImJ_T0055663.1 MGP_129S1SvImJ_G0025910.1 mouse_genomes_project 2 85463095 85465093 - Serping1 protein_coding processed_transcript MGP_129S1SvImJ_T0098859.1 MGP_129S1SvImJ_G0036938.1 mouse_genomes_project 2 58257883 58293547 + Gm13558 sense_intronic sense_intronic MGP_129S1SvImJ_T0055084.1 MGP_129S1SvImJ_G0025789.1 mouse_genomes_project 2 67439295 67696617 + B3galt1 protein_coding processed_transcript MGP_129S1SvImJ_T0055085.1 MGP_129S1SvImJ_G0025789.1 mouse_genomes_project 2 67632823 68019794 + MGP_129S1SvImJ_P0055085 B3galt1 protein_coding protein_coding MGP_129S1SvImJ_T0055086.1 MGP_129S1SvImJ_G0025789.1 mouse_genomes_project 2 68007568 68022158 + MGP_129S1SvImJ_P0055086 B3galt1 protein_coding protein_coding MGP_129S1SvImJ_T0055087.1 MGP_129S1SvImJ_G0025789.1 mouse_genomes_project 2 68019356 68024330 + MGP_129S1SvImJ_P0055087 B3galt1 protein_coding protein_coding MGP_129S1SvImJ_T0054599.1 MGP_129S1SvImJ_G0025710.1 mouse_genomes_project 2 37811376 37864625 - MGP_129S1SvImJ_P0054599 Golga1 protein_coding protein_coding MGP_129S1SvImJ_T0054600.1 MGP_129S1SvImJ_G0025710.1 mouse_genomes_project 2 37811482 37864572 - MGP_129S1SvImJ_P0054600 Golga1 protein_coding protein_coding MGP_129S1SvImJ_T0054601.1 MGP_129S1SvImJ_G0025710.1 mouse_genomes_project 2 37811724 37852095 - MGP_129S1SvImJ_P0054601 Golga1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054602.1 MGP_129S1SvImJ_G0025710.1 mouse_genomes_project 2 37812000 37813628 - Golga1 protein_coding processed_transcript MGP_129S1SvImJ_T0054603.1 MGP_129S1SvImJ_G0025710.1 mouse_genomes_project 2 37812874 37813788 - Golga1 protein_coding retained_intron MGP_129S1SvImJ_T0054604.1 MGP_129S1SvImJ_G0025710.1 mouse_genomes_project 2 37812874 37864572 - MGP_129S1SvImJ_P0054604 Golga1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054605.1 MGP_129S1SvImJ_G0025710.1 mouse_genomes_project 2 37813034 37814783 - MGP_129S1SvImJ_P0054605 Golga1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054606.1 MGP_129S1SvImJ_G0025710.1 mouse_genomes_project 2 37813375 37814463 - Golga1 protein_coding retained_intron MGP_129S1SvImJ_T0054607.1 MGP_129S1SvImJ_G0025710.1 mouse_genomes_project 2 37817952 37864572 - Golga1 protein_coding retained_intron MGP_129S1SvImJ_T0054608.1 MGP_129S1SvImJ_G0025710.1 mouse_genomes_project 2 37839641 37855203 - MGP_129S1SvImJ_P0054608 Golga1 protein_coding protein_coding MGP_129S1SvImJ_T0054609.1 MGP_129S1SvImJ_G0025710.1 mouse_genomes_project 2 37845246 37864569 - Golga1 protein_coding retained_intron MGP_129S1SvImJ_T0059550.1 MGP_129S1SvImJ_G0026951.1 mouse_genomes_project 2 179244612 179260230 + MGP_129S1SvImJ_P0059550 Rae1 protein_coding protein_coding MGP_129S1SvImJ_T0059551.1 MGP_129S1SvImJ_G0026951.1 mouse_genomes_project 2 179244619 179253926 + MGP_129S1SvImJ_P0059551 Rae1 protein_coding protein_coding MGP_129S1SvImJ_T0059552.1 MGP_129S1SvImJ_G0026951.1 mouse_genomes_project 2 179251111 179253925 + Rae1 protein_coding retained_intron MGP_129S1SvImJ_T0059553.1 MGP_129S1SvImJ_G0026951.1 mouse_genomes_project 2 179256141 179257300 + Rae1 protein_coding retained_intron MGP_129S1SvImJ_T0059554.1 MGP_129S1SvImJ_G0026951.1 mouse_genomes_project 2 179256939 179259918 + Rae1 protein_coding retained_intron MGP_129S1SvImJ_T0059582.1 MGP_129S1SvImJ_G0026962.1 mouse_genomes_project 2 180412257 180428706 + MGP_129S1SvImJ_P0059582 Stx16 protein_coding protein_coding MGP_129S1SvImJ_T0059583.1 MGP_129S1SvImJ_G0026962.1 mouse_genomes_project 2 180412267 180427007 + MGP_129S1SvImJ_P0059583 Stx16 protein_coding protein_coding MGP_129S1SvImJ_T0059584.1 MGP_129S1SvImJ_G0026962.1 mouse_genomes_project 2 180412271 180429799 + MGP_129S1SvImJ_P0059584 Stx16 protein_coding protein_coding MGP_129S1SvImJ_T0059585.1 MGP_129S1SvImJ_G0026962.1 mouse_genomes_project 2 180412871 180436037 + MGP_129S1SvImJ_P0059585 Stx16 protein_coding protein_coding MGP_129S1SvImJ_T0059586.1 MGP_129S1SvImJ_G0026962.1 mouse_genomes_project 2 180413007 180436036 + MGP_129S1SvImJ_P0059586 Stx16 protein_coding protein_coding MGP_129S1SvImJ_T0059587.1 MGP_129S1SvImJ_G0026962.1 mouse_genomes_project 2 180413015 180433238 + MGP_129S1SvImJ_P0059587 Stx16 protein_coding protein_coding MGP_129S1SvImJ_T0057391.1 MGP_129S1SvImJ_G0026436.1 mouse_genomes_project 2 129192322 129355680 - MGP_129S1SvImJ_P0057391 Fam227b protein_coding protein_coding MGP_129S1SvImJ_T0057392.1 MGP_129S1SvImJ_G0026436.1 mouse_genomes_project 2 129192469 129355660 - MGP_129S1SvImJ_P0057392 Fam227b protein_coding protein_coding MGP_129S1SvImJ_T0057393.1 MGP_129S1SvImJ_G0026436.1 mouse_genomes_project 2 129192469 129345514 - MGP_129S1SvImJ_P0057393 Fam227b protein_coding protein_coding MGP_129S1SvImJ_T0057394.1 MGP_129S1SvImJ_G0026436.1 mouse_genomes_project 2 129207069 129355680 - Fam227b protein_coding retained_intron MGP_129S1SvImJ_T0059015.1 MGP_129S1SvImJ_G0026813.1 mouse_genomes_project 2 168209370 168213047 + Srsf6 protein_coding retained_intron MGP_129S1SvImJ_T0059016.1 MGP_129S1SvImJ_G0026813.1 mouse_genomes_project 2 168209370 168214963 + MGP_129S1SvImJ_P0059016 Srsf6 protein_coding protein_coding MGP_129S1SvImJ_T0059017.1 MGP_129S1SvImJ_G0026813.1 mouse_genomes_project 2 168209404 168212865 + MGP_129S1SvImJ_P0059017 Srsf6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059018.1 MGP_129S1SvImJ_G0026813.1 mouse_genomes_project 2 168209503 168211348 + MGP_129S1SvImJ_P0059018 Srsf6 protein_coding protein_coding MGP_129S1SvImJ_T0102445.1 MGP_129S1SvImJ_G0040279.1 mouse_genomes_project 2 153300017 153303990 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0053084.1 MGP_129S1SvImJ_G0025437.1 mouse_genomes_project 2 23157785 23159051 + MGP_129S1SvImJ_P0053084 Lrrc26 protein_coding protein_coding MGP_129S1SvImJ_T0052495.1 MGP_129S1SvImJ_G0025336.1 mouse_genomes_project 2 7252191 7400736 - MGP_129S1SvImJ_P0052495 Taf3 protein_coding protein_coding MGP_129S1SvImJ_T0052496.1 MGP_129S1SvImJ_G0025336.1 mouse_genomes_project 2 7252933 7282879 - Taf3 protein_coding processed_transcript MGP_129S1SvImJ_T0052497.1 MGP_129S1SvImJ_G0025336.1 mouse_genomes_project 2 7253718 7256477 - MGP_129S1SvImJ_P0052497 Taf3 protein_coding protein_coding MGP_129S1SvImJ_T0052498.1 MGP_129S1SvImJ_G0025336.1 mouse_genomes_project 2 7253720 7256051 - MGP_129S1SvImJ_P0052498 Taf3 protein_coding protein_coding MGP_129S1SvImJ_T0003914.1 MGP_129S1SvImJ_G0003500.1 mouse_genomes_project 2 3598087 3602335 - Gm13388 antisense antisense MGP_129S1SvImJ_T0013840.1 MGP_129S1SvImJ_G0011929.1 mouse_genomes_project 2 158059051 158059333 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0052376.1 MGP_129S1SvImJ_G0025315.1 mouse_genomes_project 2 1781910 1868353 + MGP_129S1SvImJ_P0052376 Bend7 protein_coding protein_coding MGP_129S1SvImJ_T0052377.1 MGP_129S1SvImJ_G0025315.1 mouse_genomes_project 2 1781913 1856715 + MGP_129S1SvImJ_P0052377 Bend7 protein_coding protein_coding MGP_129S1SvImJ_T0052378.1 MGP_129S1SvImJ_G0025315.1 mouse_genomes_project 2 1782702 1868715 + MGP_129S1SvImJ_P0052378 Bend7 protein_coding protein_coding MGP_129S1SvImJ_T0052379.1 MGP_129S1SvImJ_G0025315.1 mouse_genomes_project 2 1817263 1869932 + Bend7 protein_coding processed_transcript MGP_129S1SvImJ_T0013861.1 MGP_129S1SvImJ_G0011950.1 mouse_genomes_project 2 163482827 163483138 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055156.1 MGP_129S1SvImJ_G0025805.1 mouse_genomes_project 2 69779006 69785927 + MGP_129S1SvImJ_P0055156 Phospho2 protein_coding protein_coding MGP_129S1SvImJ_T0055157.1 MGP_129S1SvImJ_G0025805.1 mouse_genomes_project 2 69779019 69787497 + MGP_129S1SvImJ_P0055157 Phospho2 protein_coding protein_coding MGP_129S1SvImJ_T0055158.1 MGP_129S1SvImJ_G0025805.1 mouse_genomes_project 2 69779033 69787497 + MGP_129S1SvImJ_P0055158 Phospho2 protein_coding protein_coding MGP_129S1SvImJ_T0055159.1 MGP_129S1SvImJ_G0025805.1 mouse_genomes_project 2 69779043 69781816 + Phospho2 protein_coding processed_transcript MGP_129S1SvImJ_T0055160.1 MGP_129S1SvImJ_G0025805.1 mouse_genomes_project 2 69779095 69792320 + Phospho2 protein_coding processed_transcript MGP_129S1SvImJ_T0055161.1 MGP_129S1SvImJ_G0025805.1 mouse_genomes_project 2 69780313 69787496 + MGP_129S1SvImJ_P0055161 Phospho2 protein_coding protein_coding MGP_129S1SvImJ_T0011508.1 MGP_129S1SvImJ_G0009624.1 mouse_genomes_project 2 10712200 10712387 + Gm27540 misc_RNA misc_RNA MGP_129S1SvImJ_T0017912.1 MGP_129S1SvImJ_G0015474.1 mouse_genomes_project 2 143130947 143580149 - processed_transcript processed_transcript MGP_129S1SvImJ_T0055835.1 MGP_129S1SvImJ_G0026031.1 mouse_genomes_project 2 88940295 88941228 + MGP_129S1SvImJ_P0055835 Olfr1152 protein_coding protein_coding MGP_129S1SvImJ_T0055895.1 MGP_129S1SvImJ_G0026086.1 mouse_genomes_project 2 90351190 90352126 - MGP_129S1SvImJ_P0055895 Olfr1225 protein_coding protein_coding MGP_129S1SvImJ_T0056525.1 MGP_129S1SvImJ_G0026226.1 mouse_genomes_project 2 107241603 107243308 + MGP_129S1SvImJ_P0056525 Gm11060 protein_coding protein_coding MGP_129S1SvImJ_T0007390.1 MGP_129S1SvImJ_G0006063.1 mouse_genomes_project 2 168430482 168454308 + Gm11454 lincRNA lincRNA MGP_129S1SvImJ_T0059490.1 MGP_129S1SvImJ_G0026930.1 mouse_genomes_project 2 174820844 174892366 - MGP_129S1SvImJ_P0059490 Zfp64 protein_coding protein_coding MGP_129S1SvImJ_T0059491.1 MGP_129S1SvImJ_G0026930.1 mouse_genomes_project 2 174837916 174845063 - MGP_129S1SvImJ_P0059491 Zfp64 protein_coding protein_coding MGP_129S1SvImJ_T0059492.1 MGP_129S1SvImJ_G0026930.1 mouse_genomes_project 2 174859480 174892051 - MGP_129S1SvImJ_P0059492 Zfp64 protein_coding protein_coding MGP_129S1SvImJ_T0059493.1 MGP_129S1SvImJ_G0026930.1 mouse_genomes_project 2 174868862 174892068 - MGP_129S1SvImJ_P0059493 Zfp64 protein_coding protein_coding MGP_129S1SvImJ_T0059494.1 MGP_129S1SvImJ_G0026930.1 mouse_genomes_project 2 174887300 174892045 - Zfp64 protein_coding retained_intron MGP_129S1SvImJ_T0001113.1 MGP_129S1SvImJ_G0001042.1 mouse_genomes_project 2 105341944 105345349 - TEC TEC MGP_129S1SvImJ_T0003955.1 MGP_129S1SvImJ_G0003532.1 mouse_genomes_project 2 26623930 26644394 + Gm13381 antisense antisense MGP_129S1SvImJ_T0003956.1 MGP_129S1SvImJ_G0003532.1 mouse_genomes_project 2 26624262 26644676 + Gm13381 antisense antisense MGP_129S1SvImJ_T0059029.1 MGP_129S1SvImJ_G0026816.1 mouse_genomes_project 2 168305513 168339033 + MGP_129S1SvImJ_P0059029 Ift52 protein_coding protein_coding MGP_129S1SvImJ_T0059030.1 MGP_129S1SvImJ_G0026816.1 mouse_genomes_project 2 168305650 168319539 + MGP_129S1SvImJ_P0059030 Ift52 protein_coding protein_coding MGP_129S1SvImJ_T0059031.1 MGP_129S1SvImJ_G0026816.1 mouse_genomes_project 2 168305678 168311689 + Ift52 protein_coding processed_transcript MGP_129S1SvImJ_T0059032.1 MGP_129S1SvImJ_G0026816.1 mouse_genomes_project 2 168310590 168316711 + Ift52 protein_coding processed_transcript MGP_129S1SvImJ_T0007428.1 MGP_129S1SvImJ_G0006095.1 mouse_genomes_project 2 176714477 176724502 - Gm14264 lincRNA lincRNA MGP_129S1SvImJ_T0007417.1 MGP_129S1SvImJ_G0006086.1 mouse_genomes_project 2 174967166 174968527 + Gm9873 lincRNA lincRNA MGP_129S1SvImJ_T0007418.1 MGP_129S1SvImJ_G0006086.1 mouse_genomes_project 2 174967411 174968508 + Gm9873 lincRNA lincRNA MGP_129S1SvImJ_T0001075.1 MGP_129S1SvImJ_G0001004.1 mouse_genomes_project 2 12505920 12507246 + TEC TEC MGP_129S1SvImJ_T0052886.1 MGP_129S1SvImJ_G0025399.1 mouse_genomes_project 2 21080857 21158286 + MGP_129S1SvImJ_P0052886 Nxph2 protein_coding protein_coding MGP_129S1SvImJ_T0011507.1 MGP_129S1SvImJ_G0009623.1 mouse_genomes_project 2 5736617 5736908 - Gm24534 misc_RNA misc_RNA MGP_129S1SvImJ_T0055718.1 MGP_129S1SvImJ_G0025928.1 mouse_genomes_project 2 86245069 86287098 - MGP_129S1SvImJ_P0055718 4833423E24Rik protein_coding protein_coding MGP_129S1SvImJ_T0053782.1 MGP_129S1SvImJ_G0025560.1 mouse_genomes_project 2 28458809 28500506 + MGP_129S1SvImJ_P0053782 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058363.1 MGP_129S1SvImJ_G0026684.1 mouse_genomes_project 2 157617459 157623997 - MGP_129S1SvImJ_P0058363 Pdrg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058364.1 MGP_129S1SvImJ_G0026684.1 mouse_genomes_project 2 157617459 157623997 - MGP_129S1SvImJ_P0058364 Pdrg1 protein_coding protein_coding MGP_129S1SvImJ_T0058365.1 MGP_129S1SvImJ_G0026684.1 mouse_genomes_project 2 157618039 157621060 - Pdrg1 protein_coding retained_intron MGP_129S1SvImJ_T0058366.1 MGP_129S1SvImJ_G0026684.1 mouse_genomes_project 2 157618862 157623936 - MGP_129S1SvImJ_P0058366 Pdrg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058367.1 MGP_129S1SvImJ_G0026684.1 mouse_genomes_project 2 157620782 157623916 - Pdrg1 protein_coding retained_intron MGP_129S1SvImJ_T0058368.1 MGP_129S1SvImJ_G0026684.1 mouse_genomes_project 2 157620952 157623932 - MGP_129S1SvImJ_P0058368 Pdrg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058369.1 MGP_129S1SvImJ_G0026684.1 mouse_genomes_project 2 157621920 157623947 - Pdrg1 protein_coding retained_intron MGP_129S1SvImJ_T0058370.1 MGP_129S1SvImJ_G0026684.1 mouse_genomes_project 2 157622584 157623912 - Pdrg1 protein_coding processed_transcript MGP_129S1SvImJ_T0059230.1 MGP_129S1SvImJ_G0026882.1 mouse_genomes_project 2 170404905 170424798 - MGP_129S1SvImJ_P0059230 Zfp335 protein_coding protein_coding MGP_129S1SvImJ_T0059231.1 MGP_129S1SvImJ_G0026882.1 mouse_genomes_project 2 170404905 170424798 - MGP_129S1SvImJ_P0059231 Zfp335 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059232.1 MGP_129S1SvImJ_G0026882.1 mouse_genomes_project 2 170415539 170420706 - MGP_129S1SvImJ_P0059232 Zfp335 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053568.1 MGP_129S1SvImJ_G0025528.1 mouse_genomes_project 2 26682196 26695893 - MGP_129S1SvImJ_P0053568 Gfi1b protein_coding protein_coding MGP_129S1SvImJ_T0053569.1 MGP_129S1SvImJ_G0025528.1 mouse_genomes_project 2 26682201 26695856 - MGP_129S1SvImJ_P0053569 Gfi1b protein_coding protein_coding MGP_129S1SvImJ_T0053570.1 MGP_129S1SvImJ_G0025528.1 mouse_genomes_project 2 26687521 26688143 - Gfi1b protein_coding processed_transcript MGP_129S1SvImJ_T0053571.1 MGP_129S1SvImJ_G0025528.1 mouse_genomes_project 2 26687528 26695893 - Gfi1b protein_coding processed_transcript MGP_129S1SvImJ_T0058746.1 MGP_129S1SvImJ_G0026761.1 mouse_genomes_project 2 161072721 161129860 + MGP_129S1SvImJ_P0058746 Phf20 protein_coding protein_coding MGP_129S1SvImJ_T0058747.1 MGP_129S1SvImJ_G0026761.1 mouse_genomes_project 2 161072897 161188303 + MGP_129S1SvImJ_P0058747 Phf20 protein_coding protein_coding MGP_129S1SvImJ_T0058748.1 MGP_129S1SvImJ_G0026761.1 mouse_genomes_project 2 161072989 161188301 + Phf20 protein_coding processed_transcript MGP_129S1SvImJ_T0058749.1 MGP_129S1SvImJ_G0026761.1 mouse_genomes_project 2 161073009 161101569 + Phf20 protein_coding retained_intron MGP_129S1SvImJ_T0058750.1 MGP_129S1SvImJ_G0026761.1 mouse_genomes_project 2 161073011 161130062 + Phf20 protein_coding retained_intron MGP_129S1SvImJ_T0058751.1 MGP_129S1SvImJ_G0026761.1 mouse_genomes_project 2 161100534 161127389 + Phf20 protein_coding processed_transcript MGP_129S1SvImJ_T0058752.1 MGP_129S1SvImJ_G0026761.1 mouse_genomes_project 2 161138536 161148086 + Phf20 protein_coding processed_transcript MGP_129S1SvImJ_T0058753.1 MGP_129S1SvImJ_G0026761.1 mouse_genomes_project 2 161158397 161169227 + Phf20 protein_coding processed_transcript MGP_129S1SvImJ_T0058754.1 MGP_129S1SvImJ_G0026761.1 mouse_genomes_project 2 161170447 161175306 + Phf20 protein_coding retained_intron MGP_129S1SvImJ_T0058755.1 MGP_129S1SvImJ_G0026761.1 mouse_genomes_project 2 161172731 161175398 + Phf20 protein_coding processed_transcript MGP_129S1SvImJ_T0058756.1 MGP_129S1SvImJ_G0026761.1 mouse_genomes_project 2 161173107 161181840 + Phf20 protein_coding processed_transcript MGP_129S1SvImJ_T0055976.1 MGP_129S1SvImJ_G0026132.1 mouse_genomes_project 2 92058050 92100882 + MGP_129S1SvImJ_P0055976 Agbl2 protein_coding protein_coding MGP_129S1SvImJ_T0055977.1 MGP_129S1SvImJ_G0026132.1 mouse_genomes_project 2 92058050 92119462 + MGP_129S1SvImJ_P0055977 Agbl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055978.1 MGP_129S1SvImJ_G0026132.1 mouse_genomes_project 2 92058051 92094307 + MGP_129S1SvImJ_P0055978 Agbl2 protein_coding protein_coding MGP_129S1SvImJ_T0055979.1 MGP_129S1SvImJ_G0026132.1 mouse_genomes_project 2 92058067 92099869 + MGP_129S1SvImJ_P0055979 Agbl2 protein_coding protein_coding MGP_129S1SvImJ_T0055980.1 MGP_129S1SvImJ_G0026132.1 mouse_genomes_project 2 92058562 92097907 + MGP_129S1SvImJ_P0055980 Agbl2 protein_coding protein_coding MGP_129S1SvImJ_T0055981.1 MGP_129S1SvImJ_G0026132.1 mouse_genomes_project 2 92058589 92114306 + Agbl2 protein_coding processed_transcript MGP_129S1SvImJ_T0055982.1 MGP_129S1SvImJ_G0026132.1 mouse_genomes_project 2 92058897 92099869 + MGP_129S1SvImJ_P0055982 Agbl2 protein_coding protein_coding MGP_129S1SvImJ_T0055983.1 MGP_129S1SvImJ_G0026132.1 mouse_genomes_project 2 92059350 92099376 + MGP_129S1SvImJ_P0055983 Agbl2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0055984.1 MGP_129S1SvImJ_G0026132.1 mouse_genomes_project 2 92059384 92076796 + Agbl2 protein_coding processed_transcript MGP_129S1SvImJ_T0004175.1 MGP_129S1SvImJ_G0003691.1 mouse_genomes_project 2 169527107 169532006 + Gm11455 antisense antisense MGP_129S1SvImJ_T0059619.1 MGP_129S1SvImJ_G0026967.1 mouse_genomes_project 2 180782384 180793820 - MGP_129S1SvImJ_P0059619 Ctsz protein_coding protein_coding MGP_129S1SvImJ_T0053325.1 MGP_129S1SvImJ_G0025485.1 mouse_genomes_project 2 24311103 24329986 - MGP_129S1SvImJ_P0053325 Snapc4 protein_coding protein_coding MGP_129S1SvImJ_T0053326.1 MGP_129S1SvImJ_G0025485.1 mouse_genomes_project 2 24311105 24313363 - Snapc4 protein_coding processed_transcript MGP_129S1SvImJ_T0053327.1 MGP_129S1SvImJ_G0025485.1 mouse_genomes_project 2 24311112 24329990 - MGP_129S1SvImJ_P0053327 Snapc4 protein_coding protein_coding MGP_129S1SvImJ_T0053328.1 MGP_129S1SvImJ_G0025485.1 mouse_genomes_project 2 24311114 24329969 - Snapc4 protein_coding processed_transcript MGP_129S1SvImJ_T0053329.1 MGP_129S1SvImJ_G0025485.1 mouse_genomes_project 2 24314952 24316109 - Snapc4 protein_coding processed_transcript MGP_129S1SvImJ_T0053330.1 MGP_129S1SvImJ_G0025485.1 mouse_genomes_project 2 24317795 24322004 - MGP_129S1SvImJ_P0053330 Snapc4 protein_coding protein_coding MGP_129S1SvImJ_T0053331.1 MGP_129S1SvImJ_G0025485.1 mouse_genomes_project 2 24317824 24321984 - Snapc4 protein_coding processed_transcript MGP_129S1SvImJ_T0053332.1 MGP_129S1SvImJ_G0025485.1 mouse_genomes_project 2 24317845 24319478 - Snapc4 protein_coding processed_transcript MGP_129S1SvImJ_T0053333.1 MGP_129S1SvImJ_G0025485.1 mouse_genomes_project 2 24318322 24322501 - Snapc4 protein_coding processed_transcript MGP_129S1SvImJ_T0053334.1 MGP_129S1SvImJ_G0025485.1 mouse_genomes_project 2 24319171 24321728 - Snapc4 protein_coding processed_transcript MGP_129S1SvImJ_T0053335.1 MGP_129S1SvImJ_G0025485.1 mouse_genomes_project 2 24319171 24329972 - Snapc4 protein_coding processed_transcript MGP_129S1SvImJ_T0053336.1 MGP_129S1SvImJ_G0025485.1 mouse_genomes_project 2 24321934 24323111 - Snapc4 protein_coding processed_transcript MGP_129S1SvImJ_T0053337.1 MGP_129S1SvImJ_G0025485.1 mouse_genomes_project 2 24326011 24329990 - Snapc4 protein_coding processed_transcript MGP_129S1SvImJ_T0053338.1 MGP_129S1SvImJ_G0025485.1 mouse_genomes_project 2 24326716 24329963 - Snapc4 protein_coding processed_transcript MGP_129S1SvImJ_T0013596.1 MGP_129S1SvImJ_G0011685.1 mouse_genomes_project 2 69279853 69280356 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054380.1 MGP_129S1SvImJ_G0025647.1 mouse_genomes_project 2 33596254 33678815 - MGP_129S1SvImJ_P0054380 Hc protein_coding protein_coding MGP_129S1SvImJ_T0054381.1 MGP_129S1SvImJ_G0025647.1 mouse_genomes_project 2 33596626 33636518 - MGP_129S1SvImJ_P0054381 Hc protein_coding protein_coding MGP_129S1SvImJ_T0054382.1 MGP_129S1SvImJ_G0025647.1 mouse_genomes_project 2 33604117 33607663 - Hc protein_coding processed_transcript MGP_129S1SvImJ_T0054383.1 MGP_129S1SvImJ_G0025647.1 mouse_genomes_project 2 33604211 33617734 - Hc protein_coding retained_intron MGP_129S1SvImJ_T0054384.1 MGP_129S1SvImJ_G0025647.1 mouse_genomes_project 2 33609286 33623210 - Hc protein_coding processed_transcript MGP_129S1SvImJ_T0053364.1 MGP_129S1SvImJ_G0025489.1 mouse_genomes_project 2 24360381 24399669 - MGP_129S1SvImJ_P0053364 Sec16a protein_coding protein_coding MGP_129S1SvImJ_T0053365.1 MGP_129S1SvImJ_G0025489.1 mouse_genomes_project 2 24360381 24382683 - MGP_129S1SvImJ_P0053365 Sec16a protein_coding protein_coding MGP_129S1SvImJ_T0053366.1 MGP_129S1SvImJ_G0025489.1 mouse_genomes_project 2 24360383 24399671 - MGP_129S1SvImJ_P0053366 Sec16a protein_coding protein_coding MGP_129S1SvImJ_T0053367.1 MGP_129S1SvImJ_G0025489.1 mouse_genomes_project 2 24361239 24366121 - Sec16a protein_coding processed_transcript MGP_129S1SvImJ_T0053368.1 MGP_129S1SvImJ_G0025489.1 mouse_genomes_project 2 24361669 24369296 - Sec16a protein_coding processed_transcript MGP_129S1SvImJ_T0053369.1 MGP_129S1SvImJ_G0025489.1 mouse_genomes_project 2 24367444 24372816 - Sec16a protein_coding processed_transcript MGP_129S1SvImJ_T0053370.1 MGP_129S1SvImJ_G0025489.1 mouse_genomes_project 2 24389141 24394210 - MGP_129S1SvImJ_P0053370 Sec16a protein_coding protein_coding MGP_129S1SvImJ_T0053371.1 MGP_129S1SvImJ_G0025489.1 mouse_genomes_project 2 24396418 24399655 - Sec16a protein_coding processed_transcript MGP_129S1SvImJ_T0057473.1 MGP_129S1SvImJ_G0026453.1 mouse_genomes_project 2 130517697 130524866 - MGP_129S1SvImJ_P0057473 Ciao1 protein_coding protein_coding MGP_129S1SvImJ_T0057474.1 MGP_129S1SvImJ_G0026453.1 mouse_genomes_project 2 130520104 130523292 - Ciao1 protein_coding retained_intron MGP_129S1SvImJ_T0057475.1 MGP_129S1SvImJ_G0026453.1 mouse_genomes_project 2 130520231 130524866 - MGP_129S1SvImJ_P0057475 Ciao1 protein_coding protein_coding MGP_129S1SvImJ_T0057476.1 MGP_129S1SvImJ_G0026453.1 mouse_genomes_project 2 130523101 130524866 - MGP_129S1SvImJ_P0057476 Ciao1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0001055.1 MGP_129S1SvImJ_G0000984.1 mouse_genomes_project 2 8947994 8950097 - TEC TEC MGP_129S1SvImJ_T0058271.1 MGP_129S1SvImJ_G0026649.1 mouse_genomes_project 2 156510026 156522762 + MGP_129S1SvImJ_P0058271 Slc52a3 protein_coding protein_coding MGP_129S1SvImJ_T0058272.1 MGP_129S1SvImJ_G0026649.1 mouse_genomes_project 2 156510050 156522763 + MGP_129S1SvImJ_P0058272 Slc52a3 protein_coding protein_coding MGP_129S1SvImJ_T0058273.1 MGP_129S1SvImJ_G0026649.1 mouse_genomes_project 2 156513377 156522727 + MGP_129S1SvImJ_P0058273 Slc52a3 protein_coding protein_coding MGP_129S1SvImJ_T0058274.1 MGP_129S1SvImJ_G0026649.1 mouse_genomes_project 2 156513409 156522751 + MGP_129S1SvImJ_P0058274 Slc52a3 protein_coding protein_coding MGP_129S1SvImJ_T0011542.1 MGP_129S1SvImJ_G0009658.1 mouse_genomes_project 2 170258388 170258704 + Gm22596 misc_RNA misc_RNA MGP_129S1SvImJ_T0101890.1 MGP_129S1SvImJ_G0039815.1 mouse_genomes_project 2 179876869 179962570 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101891.1 MGP_129S1SvImJ_G0039815.1 mouse_genomes_project 2 179877989 179962570 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101892.1 MGP_129S1SvImJ_G0039815.1 mouse_genomes_project 2 179878750 179930935 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101893.1 MGP_129S1SvImJ_G0039815.1 mouse_genomes_project 2 179882455 179962570 - transcribed_unprocessed_pseudogene retained_intron MGP_129S1SvImJ_T0101894.1 MGP_129S1SvImJ_G0039815.1 mouse_genomes_project 2 179883399 179888316 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101895.1 MGP_129S1SvImJ_G0039815.1 mouse_genomes_project 2 179884131 179888867 - transcribed_unprocessed_pseudogene retained_intron MGP_129S1SvImJ_T0101896.1 MGP_129S1SvImJ_G0039815.1 mouse_genomes_project 2 179893656 179962399 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101897.1 MGP_129S1SvImJ_G0039815.1 mouse_genomes_project 2 179893656 179962570 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101898.1 MGP_129S1SvImJ_G0039815.1 mouse_genomes_project 2 179894683 179909610 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101899.1 MGP_129S1SvImJ_G0039815.1 mouse_genomes_project 2 179894697 179962671 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101900.1 MGP_129S1SvImJ_G0039815.1 mouse_genomes_project 2 179909271 179962535 - transcribed_unprocessed_pseudogene retained_intron MGP_129S1SvImJ_T0101901.1 MGP_129S1SvImJ_G0039815.1 mouse_genomes_project 2 179916659 179962566 - transcribed_unprocessed_pseudogene retained_intron MGP_129S1SvImJ_T0013755.1 MGP_129S1SvImJ_G0011844.1 mouse_genomes_project 2 124397770 124398156 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057853.1 MGP_129S1SvImJ_G0026542.1 mouse_genomes_project 2 135912211 135965057 - MGP_129S1SvImJ_P0057853 Prokr2 protein_coding protein_coding MGP_129S1SvImJ_T0057854.1 MGP_129S1SvImJ_G0026542.1 mouse_genomes_project 2 135949974 135965055 - MGP_129S1SvImJ_P0057854 Prokr2 protein_coding protein_coding MGP_129S1SvImJ_T0057855.1 MGP_129S1SvImJ_G0026542.1 mouse_genomes_project 2 135949974 135965030 - MGP_129S1SvImJ_P0057855 Prokr2 protein_coding protein_coding MGP_129S1SvImJ_T0057856.1 MGP_129S1SvImJ_G0026542.1 mouse_genomes_project 2 135950814 135965077 - MGP_129S1SvImJ_P0057856 Prokr2 protein_coding protein_coding MGP_129S1SvImJ_T0057857.1 MGP_129S1SvImJ_G0026542.1 mouse_genomes_project 2 135961201 135965051 - MGP_129S1SvImJ_P0057857 Prokr2 protein_coding protein_coding MGP_129S1SvImJ_T0055550.1 MGP_129S1SvImJ_G0025883.1 mouse_genomes_project 2 80888457 80897780 + Dnajc10 protein_coding processed_transcript MGP_129S1SvImJ_T0055551.1 MGP_129S1SvImJ_G0025883.1 mouse_genomes_project 2 80888457 80928823 + MGP_129S1SvImJ_P0055551 Dnajc10 protein_coding protein_coding MGP_129S1SvImJ_T0055552.1 MGP_129S1SvImJ_G0025883.1 mouse_genomes_project 2 80904261 80906622 + Dnajc10 protein_coding processed_transcript MGP_129S1SvImJ_T0055553.1 MGP_129S1SvImJ_G0025883.1 mouse_genomes_project 2 80906521 80913812 + Dnajc10 protein_coding processed_transcript MGP_129S1SvImJ_T0055554.1 MGP_129S1SvImJ_G0025883.1 mouse_genomes_project 2 80920622 80923911 + Dnajc10 protein_coding processed_transcript MGP_129S1SvImJ_T0013844.1 MGP_129S1SvImJ_G0011933.1 mouse_genomes_project 2 160281047 160282439 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013436.1 MGP_129S1SvImJ_G0011525.1 mouse_genomes_project 2 8471478 8472412 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059613.1 MGP_129S1SvImJ_G0026966.1 mouse_genomes_project 2 180770681 180782394 + MGP_129S1SvImJ_P0059613 Nelfcd protein_coding protein_coding MGP_129S1SvImJ_T0059614.1 MGP_129S1SvImJ_G0026966.1 mouse_genomes_project 2 180770728 180782394 + MGP_129S1SvImJ_P0059614 Nelfcd protein_coding protein_coding MGP_129S1SvImJ_T0059615.1 MGP_129S1SvImJ_G0026966.1 mouse_genomes_project 2 180770757 180777553 + Nelfcd protein_coding processed_transcript MGP_129S1SvImJ_T0059616.1 MGP_129S1SvImJ_G0026966.1 mouse_genomes_project 2 180778272 180779804 + Nelfcd protein_coding retained_intron MGP_129S1SvImJ_T0059617.1 MGP_129S1SvImJ_G0026966.1 mouse_genomes_project 2 180779570 180780840 + Nelfcd protein_coding retained_intron MGP_129S1SvImJ_T0059618.1 MGP_129S1SvImJ_G0026966.1 mouse_genomes_project 2 180781253 180782289 + Nelfcd protein_coding retained_intron MGP_129S1SvImJ_T0059404.1 MGP_129S1SvImJ_G0026912.1 mouse_genomes_project 2 173150246 173213353 + MGP_129S1SvImJ_P0059404 Slc9a8 protein_coding protein_coding MGP_129S1SvImJ_T0059405.1 MGP_129S1SvImJ_G0026912.1 mouse_genomes_project 2 173150255 173210989 + MGP_129S1SvImJ_P0059405 Slc9a8 protein_coding protein_coding MGP_129S1SvImJ_T0059406.1 MGP_129S1SvImJ_G0026912.1 mouse_genomes_project 2 173150255 173213351 + MGP_129S1SvImJ_P0059406 Slc9a8 protein_coding protein_coding MGP_129S1SvImJ_T0059407.1 MGP_129S1SvImJ_G0026912.1 mouse_genomes_project 2 173150257 173154669 + Slc9a8 protein_coding retained_intron MGP_129S1SvImJ_T0059408.1 MGP_129S1SvImJ_G0026912.1 mouse_genomes_project 2 173150264 173180001 + Slc9a8 protein_coding retained_intron MGP_129S1SvImJ_T0059409.1 MGP_129S1SvImJ_G0026912.1 mouse_genomes_project 2 173150266 173213352 + Slc9a8 protein_coding processed_transcript MGP_129S1SvImJ_T0059410.1 MGP_129S1SvImJ_G0026912.1 mouse_genomes_project 2 173150271 173165699 + Slc9a8 protein_coding retained_intron MGP_129S1SvImJ_T0059411.1 MGP_129S1SvImJ_G0026912.1 mouse_genomes_project 2 173150272 173202535 + Slc9a8 protein_coding processed_transcript MGP_129S1SvImJ_T0059412.1 MGP_129S1SvImJ_G0026912.1 mouse_genomes_project 2 173150276 173213352 + Slc9a8 protein_coding processed_transcript MGP_129S1SvImJ_T0059413.1 MGP_129S1SvImJ_G0026912.1 mouse_genomes_project 2 173152653 173202562 + Slc9a8 protein_coding processed_transcript MGP_129S1SvImJ_T0059414.1 MGP_129S1SvImJ_G0026912.1 mouse_genomes_project 2 173184006 173202560 + Slc9a8 protein_coding processed_transcript MGP_129S1SvImJ_T0059415.1 MGP_129S1SvImJ_G0026912.1 mouse_genomes_project 2 173184095 173203899 + Slc9a8 protein_coding processed_transcript MGP_129S1SvImJ_T0059416.1 MGP_129S1SvImJ_G0026912.1 mouse_genomes_project 2 173184195 173213352 + Slc9a8 protein_coding processed_transcript MGP_129S1SvImJ_T0053049.1 MGP_129S1SvImJ_G0025428.1 mouse_genomes_project 2 23100840 23104585 - MGP_129S1SvImJ_P0053049 Rnf224 protein_coding protein_coding MGP_129S1SvImJ_T0053050.1 MGP_129S1SvImJ_G0025428.1 mouse_genomes_project 2 23101347 23104487 - MGP_129S1SvImJ_P0053050 Rnf224 protein_coding protein_coding MGP_129S1SvImJ_T0054496.1 MGP_129S1SvImJ_G0025680.1 mouse_genomes_project 2 35587995 35588949 + MGP_129S1SvImJ_P0054496 Olfr354 protein_coding protein_coding MGP_129S1SvImJ_T0057372.1 MGP_129S1SvImJ_G0026432.1 mouse_genomes_project 2 128873056 128874747 + MGP_129S1SvImJ_P0057372 Eid1 protein_coding protein_coding MGP_129S1SvImJ_T0057993.1 MGP_129S1SvImJ_G0026574.1 mouse_genomes_project 2 147074398 147084207 + MGP_129S1SvImJ_P0057993 Snrpb2 protein_coding protein_coding MGP_129S1SvImJ_T0057994.1 MGP_129S1SvImJ_G0026574.1 mouse_genomes_project 2 147074420 147077094 + Snrpb2 protein_coding retained_intron MGP_129S1SvImJ_T0057995.1 MGP_129S1SvImJ_G0026574.1 mouse_genomes_project 2 147074490 147080778 + MGP_129S1SvImJ_P0057995 Snrpb2 protein_coding protein_coding MGP_129S1SvImJ_T0057996.1 MGP_129S1SvImJ_G0026574.1 mouse_genomes_project 2 147075761 147080778 + Snrpb2 protein_coding retained_intron MGP_129S1SvImJ_T0057997.1 MGP_129S1SvImJ_G0026574.1 mouse_genomes_project 2 147079532 147084207 + Snrpb2 protein_coding retained_intron MGP_129S1SvImJ_T0003902.1 MGP_129S1SvImJ_G0003492.1 mouse_genomes_project 2 450809 456737 + Gm13184 antisense antisense MGP_129S1SvImJ_T0059059.1 MGP_129S1SvImJ_G0026825.1 mouse_genomes_project 2 168856444 168898870 + MGP_129S1SvImJ_P0059059 Hnf4a protein_coding protein_coding MGP_129S1SvImJ_T0059060.1 MGP_129S1SvImJ_G0026825.1 mouse_genomes_project 2 168893059 168906232 + Hnf4a protein_coding processed_transcript MGP_129S1SvImJ_T0059061.1 MGP_129S1SvImJ_G0026825.1 mouse_genomes_project 2 168893428 168921128 + MGP_129S1SvImJ_P0059061 Hnf4a protein_coding protein_coding MGP_129S1SvImJ_T0059062.1 MGP_129S1SvImJ_G0026825.1 mouse_genomes_project 2 168893429 168921123 + MGP_129S1SvImJ_P0059062 Hnf4a protein_coding protein_coding MGP_129S1SvImJ_T0059063.1 MGP_129S1SvImJ_G0026825.1 mouse_genomes_project 2 168896324 168906231 + MGP_129S1SvImJ_P0059063 Hnf4a protein_coding protein_coding MGP_129S1SvImJ_T0017804.1 MGP_129S1SvImJ_G0015417.1 mouse_genomes_project 2 49526361 49602476 + Gm13483 processed_transcript processed_transcript MGP_129S1SvImJ_T0017805.1 MGP_129S1SvImJ_G0015417.1 mouse_genomes_project 2 49526415 49671939 + Gm13483 processed_transcript processed_transcript MGP_129S1SvImJ_T0013588.1 MGP_129S1SvImJ_G0011677.1 mouse_genomes_project 2 65986373 65986595 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058321.1 MGP_129S1SvImJ_G0026673.1 mouse_genomes_project 2 157189336 157190685 + MGP_129S1SvImJ_P0058321 protein_coding protein_coding MGP_129S1SvImJ_T0058322.1 MGP_129S1SvImJ_G0026673.1 mouse_genomes_project 2 157190477 157197588 + MGP_129S1SvImJ_P0058322 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0058323.1 MGP_129S1SvImJ_G0026673.1 mouse_genomes_project 2 157195340 157197584 + protein_coding retained_intron MGP_129S1SvImJ_T0053968.1 MGP_129S1SvImJ_G0025585.1 mouse_genomes_project 2 29792134 29864562 + MGP_129S1SvImJ_P0053968 Ass1 protein_coding protein_coding MGP_129S1SvImJ_T0053969.1 MGP_129S1SvImJ_G0025585.1 mouse_genomes_project 2 29792156 29864307 + MGP_129S1SvImJ_P0053969 Ass1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0053970.1 MGP_129S1SvImJ_G0025585.1 mouse_genomes_project 2 29829401 29849303 + Ass1 protein_coding retained_intron MGP_129S1SvImJ_T0053971.1 MGP_129S1SvImJ_G0025585.1 mouse_genomes_project 2 29832353 29858663 + Ass1 protein_coding retained_intron MGP_129S1SvImJ_T0053972.1 MGP_129S1SvImJ_G0025585.1 mouse_genomes_project 2 29862378 29864421 + Ass1 protein_coding retained_intron MGP_129S1SvImJ_T0102430.1 MGP_129S1SvImJ_G0040264.1 mouse_genomes_project 2 90567224 90576788 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0058065.1 MGP_129S1SvImJ_G0026592.1 mouse_genomes_project 2 148936001 148936761 + MGP_129S1SvImJ_P0058065 Scp2d1 protein_coding protein_coding MGP_129S1SvImJ_T0007181.1 MGP_129S1SvImJ_G0005891.1 mouse_genomes_project 2 32015156 32028974 + Gm13530 lincRNA lincRNA MGP_129S1SvImJ_T0098569.1 MGP_129S1SvImJ_G0036654.1 mouse_genomes_project 2 123508290 123508415 - n-R5s205 rRNA rRNA MGP_129S1SvImJ_T0013529.1 MGP_129S1SvImJ_G0011618.1 mouse_genomes_project 2 44922047 44923046 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013809.1 MGP_129S1SvImJ_G0011898.1 mouse_genomes_project 2 148440357 148440760 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004141.1 MGP_129S1SvImJ_G0003663.1 mouse_genomes_project 2 156169326 156176306 - Tmem74bos antisense antisense MGP_129S1SvImJ_T0004142.1 MGP_129S1SvImJ_G0003663.1 mouse_genomes_project 2 156170880 156176030 - Tmem74bos antisense antisense MGP_129S1SvImJ_T0055162.1 MGP_129S1SvImJ_G0025806.1 mouse_genomes_project 2 69815736 69818116 + Klhl23 protein_coding processed_transcript MGP_129S1SvImJ_T0055163.1 MGP_129S1SvImJ_G0025806.1 mouse_genomes_project 2 69816162 69830444 + MGP_129S1SvImJ_P0055163 Klhl23 protein_coding protein_coding MGP_129S1SvImJ_T0055164.1 MGP_129S1SvImJ_G0025806.1 mouse_genomes_project 2 69818146 69820037 + Klhl23 protein_coding processed_transcript MGP_129S1SvImJ_T0059202.1 MGP_129S1SvImJ_G0026879.1 mouse_genomes_project 2 170337844 170350020 + MGP_129S1SvImJ_P0059202 Ctsa protein_coding protein_coding MGP_129S1SvImJ_T0059203.1 MGP_129S1SvImJ_G0026879.1 mouse_genomes_project 2 170337844 170349002 + MGP_129S1SvImJ_P0059203 Ctsa protein_coding protein_coding MGP_129S1SvImJ_T0059204.1 MGP_129S1SvImJ_G0026879.1 mouse_genomes_project 2 170337858 170338731 + Ctsa protein_coding processed_transcript MGP_129S1SvImJ_T0059205.1 MGP_129S1SvImJ_G0026879.1 mouse_genomes_project 2 170337872 170350020 + MGP_129S1SvImJ_P0059205 Ctsa protein_coding protein_coding MGP_129S1SvImJ_T0059206.1 MGP_129S1SvImJ_G0026879.1 mouse_genomes_project 2 170337880 170339034 + MGP_129S1SvImJ_P0059206 Ctsa protein_coding protein_coding MGP_129S1SvImJ_T0059207.1 MGP_129S1SvImJ_G0026879.1 mouse_genomes_project 2 170337897 170338751 + Ctsa protein_coding processed_transcript MGP_129S1SvImJ_T0059208.1 MGP_129S1SvImJ_G0026879.1 mouse_genomes_project 2 170337897 170340663 + MGP_129S1SvImJ_P0059208 Ctsa protein_coding protein_coding MGP_129S1SvImJ_T0059209.1 MGP_129S1SvImJ_G0026879.1 mouse_genomes_project 2 170338778 170339393 + Ctsa protein_coding retained_intron MGP_129S1SvImJ_T0059210.1 MGP_129S1SvImJ_G0026879.1 mouse_genomes_project 2 170338786 170344128 + MGP_129S1SvImJ_P0059210 Ctsa protein_coding protein_coding MGP_129S1SvImJ_T0059211.1 MGP_129S1SvImJ_G0026879.1 mouse_genomes_project 2 170338818 170339846 + Ctsa protein_coding retained_intron MGP_129S1SvImJ_T0059212.1 MGP_129S1SvImJ_G0026879.1 mouse_genomes_project 2 170338829 170343603 + MGP_129S1SvImJ_P0059212 Ctsa protein_coding protein_coding MGP_129S1SvImJ_T0059213.1 MGP_129S1SvImJ_G0026879.1 mouse_genomes_project 2 170339001 170340165 + Ctsa protein_coding retained_intron MGP_129S1SvImJ_T0059214.1 MGP_129S1SvImJ_G0026879.1 mouse_genomes_project 2 170339001 170344161 + Ctsa protein_coding retained_intron MGP_129S1SvImJ_T0059215.1 MGP_129S1SvImJ_G0026879.1 mouse_genomes_project 2 170339044 170343598 + Ctsa protein_coding retained_intron MGP_129S1SvImJ_T0059216.1 MGP_129S1SvImJ_G0026879.1 mouse_genomes_project 2 170339281 170340693 + Ctsa protein_coding processed_transcript MGP_129S1SvImJ_T0059217.1 MGP_129S1SvImJ_G0026879.1 mouse_genomes_project 2 170339444 170340441 + Ctsa protein_coding retained_intron MGP_129S1SvImJ_T0059218.1 MGP_129S1SvImJ_G0026879.1 mouse_genomes_project 2 170344307 170346643 + Ctsa protein_coding retained_intron MGP_129S1SvImJ_T0059088.1 MGP_129S1SvImJ_G0026832.1 mouse_genomes_project 2 169220413 169283991 - MGP_129S1SvImJ_P0059088 Rims4 protein_coding protein_coding MGP_129S1SvImJ_T0007369.1 MGP_129S1SvImJ_G0006045.1 mouse_genomes_project 2 157267283 157269242 - Gm26841 lincRNA lincRNA MGP_129S1SvImJ_T0102426.1 MGP_129S1SvImJ_G0040260.1 mouse_genomes_project 2 89437495 89438431 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0055495.1 MGP_129S1SvImJ_G0025874.1 mouse_genomes_project 2 78347152 78420375 - MGP_129S1SvImJ_P0055495 Cwc22 protein_coding protein_coding MGP_129S1SvImJ_T0055496.1 MGP_129S1SvImJ_G0025874.1 mouse_genomes_project 2 78368053 78420570 - MGP_129S1SvImJ_P0055496 Cwc22 protein_coding protein_coding MGP_129S1SvImJ_T0055497.1 MGP_129S1SvImJ_G0025874.1 mouse_genomes_project 2 78368053 78420548 - MGP_129S1SvImJ_P0055497 Cwc22 protein_coding protein_coding MGP_129S1SvImJ_T0055498.1 MGP_129S1SvImJ_G0025874.1 mouse_genomes_project 2 78368166 78398643 - Cwc22 protein_coding processed_transcript MGP_129S1SvImJ_T0055499.1 MGP_129S1SvImJ_G0025874.1 mouse_genomes_project 2 78368166 78420378 - MGP_129S1SvImJ_P0055499 Cwc22 protein_coding protein_coding MGP_129S1SvImJ_T0055500.1 MGP_129S1SvImJ_G0025874.1 mouse_genomes_project 2 78368168 78420548 - MGP_129S1SvImJ_P0055500 Cwc22 protein_coding protein_coding MGP_129S1SvImJ_T0055501.1 MGP_129S1SvImJ_G0025874.1 mouse_genomes_project 2 78380397 78382296 - Cwc22 protein_coding processed_transcript MGP_129S1SvImJ_T0055502.1 MGP_129S1SvImJ_G0025874.1 mouse_genomes_project 2 78390541 78420394 - Cwc22 protein_coding processed_transcript MGP_129S1SvImJ_T0055503.1 MGP_129S1SvImJ_G0025874.1 mouse_genomes_project 2 78400157 78420378 - Cwc22 protein_coding processed_transcript MGP_129S1SvImJ_T0055504.1 MGP_129S1SvImJ_G0025874.1 mouse_genomes_project 2 78403401 78420133 - MGP_129S1SvImJ_P0055504 Cwc22 protein_coding protein_coding MGP_129S1SvImJ_T0055505.1 MGP_129S1SvImJ_G0025874.1 mouse_genomes_project 2 78403487 78420384 - MGP_129S1SvImJ_P0055505 Cwc22 protein_coding protein_coding MGP_129S1SvImJ_T0055506.1 MGP_129S1SvImJ_G0025874.1 mouse_genomes_project 2 78403543 78410716 - Cwc22 protein_coding processed_transcript MGP_129S1SvImJ_T0055507.1 MGP_129S1SvImJ_G0025874.1 mouse_genomes_project 2 78404889 78410774 - Cwc22 protein_coding processed_transcript MGP_129S1SvImJ_T0058203.1 MGP_129S1SvImJ_G0026633.1 mouse_genomes_project 2 155350980 155375904 + Gins1 protein_coding processed_transcript MGP_129S1SvImJ_T0058204.1 MGP_129S1SvImJ_G0026633.1 mouse_genomes_project 2 155355174 155381232 + MGP_129S1SvImJ_P0058204 Gins1 protein_coding protein_coding MGP_129S1SvImJ_T0058205.1 MGP_129S1SvImJ_G0026633.1 mouse_genomes_project 2 155355197 155376098 + Gins1 protein_coding processed_transcript MGP_129S1SvImJ_T0058206.1 MGP_129S1SvImJ_G0026633.1 mouse_genomes_project 2 155355299 155381225 + MGP_129S1SvImJ_P0058206 Gins1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0058207.1 MGP_129S1SvImJ_G0026633.1 mouse_genomes_project 2 155360528 155377540 + Gins1 protein_coding processed_transcript MGP_129S1SvImJ_T0052310.1 MGP_129S1SvImJ_G0025304.1 mouse_genomes_project 2 292963 296656 - MGP_129S1SvImJ_P0052310 Rpp38 protein_coding protein_coding MGP_129S1SvImJ_T0004090.1 MGP_129S1SvImJ_G0003627.1 mouse_genomes_project 2 125775783 125782425 - Bloc1s6os antisense antisense MGP_129S1SvImJ_T0013712.1 MGP_129S1SvImJ_G0011801.1 mouse_genomes_project 2 106671887 106674242 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004076.1 MGP_129S1SvImJ_G0003617.1 mouse_genomes_project 2 116530422 116537428 + C130080G10Rik antisense antisense MGP_129S1SvImJ_T0004077.1 MGP_129S1SvImJ_G0003617.1 mouse_genomes_project 2 116530483 116537405 + C130080G10Rik antisense antisense MGP_129S1SvImJ_T0004078.1 MGP_129S1SvImJ_G0003617.1 mouse_genomes_project 2 116531334 116536907 + C130080G10Rik antisense antisense MGP_129S1SvImJ_T0004079.1 MGP_129S1SvImJ_G0003617.1 mouse_genomes_project 2 116532375 116537213 + C130080G10Rik antisense antisense MGP_129S1SvImJ_T0004080.1 MGP_129S1SvImJ_G0003617.1 mouse_genomes_project 2 116532400 116540810 + C130080G10Rik antisense antisense MGP_129S1SvImJ_T0013848.1 MGP_129S1SvImJ_G0011937.1 mouse_genomes_project 2 160378828 160379290 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053403.1 MGP_129S1SvImJ_G0025493.1 mouse_genomes_project 2 24554092 24567210 - Agpat2 protein_coding processed_transcript MGP_129S1SvImJ_T0053404.1 MGP_129S1SvImJ_G0025493.1 mouse_genomes_project 2 24554092 24567331 - MGP_129S1SvImJ_P0053404 Agpat2 protein_coding protein_coding MGP_129S1SvImJ_T0053405.1 MGP_129S1SvImJ_G0025493.1 mouse_genomes_project 2 24555538 24567416 - Agpat2 protein_coding processed_transcript MGP_129S1SvImJ_T0053406.1 MGP_129S1SvImJ_G0025493.1 mouse_genomes_project 2 24557153 24566715 - Agpat2 protein_coding processed_transcript MGP_129S1SvImJ_T0053407.1 MGP_129S1SvImJ_G0025493.1 mouse_genomes_project 2 24557476 24566925 - MGP_129S1SvImJ_P0053407 Agpat2 protein_coding protein_coding MGP_129S1SvImJ_T0054366.1 MGP_129S1SvImJ_G0025645.1 mouse_genomes_project 2 33509698 33530684 - MGP_129S1SvImJ_P0054366 Phf19 protein_coding protein_coding MGP_129S1SvImJ_T0054367.1 MGP_129S1SvImJ_G0025645.1 mouse_genomes_project 2 33509725 33520094 - Phf19 protein_coding processed_transcript MGP_129S1SvImJ_T0054368.1 MGP_129S1SvImJ_G0025645.1 mouse_genomes_project 2 33514023 33520849 - Phf19 protein_coding processed_transcript MGP_129S1SvImJ_T0054369.1 MGP_129S1SvImJ_G0025645.1 mouse_genomes_project 2 33514910 33530734 - Phf19 protein_coding retained_intron MGP_129S1SvImJ_T0054370.1 MGP_129S1SvImJ_G0025645.1 mouse_genomes_project 2 33524006 33530725 - MGP_129S1SvImJ_P0054370 Phf19 protein_coding protein_coding MGP_129S1SvImJ_T0001066.1 MGP_129S1SvImJ_G0000995.1 mouse_genomes_project 2 10724291 10725980 - TEC TEC MGP_129S1SvImJ_T0058422.1 MGP_129S1SvImJ_G0026697.1 mouse_genomes_project 2 158431446 158465555 + MGP_129S1SvImJ_P0058422 Mapre1 protein_coding protein_coding MGP_129S1SvImJ_T0058423.1 MGP_129S1SvImJ_G0026697.1 mouse_genomes_project 2 158431774 158450337 + Mapre1 protein_coding processed_transcript MGP_129S1SvImJ_T0058424.1 MGP_129S1SvImJ_G0026697.1 mouse_genomes_project 2 158435569 158448330 + Mapre1 protein_coding processed_transcript MGP_129S1SvImJ_T0001112.1 MGP_129S1SvImJ_G0001041.1 mouse_genomes_project 2 97448029 97475560 + TEC TEC MGP_129S1SvImJ_T0057955.1 MGP_129S1SvImJ_G0026565.1 mouse_genomes_project 2 143580612 143663694 + MGP_129S1SvImJ_P0057955 Ism1 protein_coding protein_coding MGP_129S1SvImJ_T0057956.1 MGP_129S1SvImJ_G0026565.1 mouse_genomes_project 2 143580612 143663695 + MGP_129S1SvImJ_P0057956 Ism1 protein_coding protein_coding MGP_129S1SvImJ_T0013800.1 MGP_129S1SvImJ_G0011889.1 mouse_genomes_project 2 146571826 146572756 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056713.1 MGP_129S1SvImJ_G0026298.1 mouse_genomes_project 2 116250211 116307675 - MGP_129S1SvImJ_P0056713 Scg5 protein_coding protein_coding MGP_129S1SvImJ_T0056714.1 MGP_129S1SvImJ_G0026298.1 mouse_genomes_project 2 116305893 116307316 - Scg5 protein_coding processed_transcript MGP_129S1SvImJ_T0007287.1 MGP_129S1SvImJ_G0005977.1 mouse_genomes_project 2 105319221 105353338 - A930006I01Rik lincRNA lincRNA MGP_129S1SvImJ_T0013893.1 MGP_129S1SvImJ_G0011982.1 mouse_genomes_project 2 180381161 180381816 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003999.1 MGP_129S1SvImJ_G0003567.1 mouse_genomes_project 2 60153403 60156565 + Gm13583 antisense antisense MGP_129S1SvImJ_T0004000.1 MGP_129S1SvImJ_G0003567.1 mouse_genomes_project 2 60153405 60153528 + Gm13583 antisense antisense MGP_129S1SvImJ_T0004001.1 MGP_129S1SvImJ_G0003567.1 mouse_genomes_project 2 60154996 60155916 + Gm13583 antisense antisense MGP_129S1SvImJ_T0055128.1 MGP_129S1SvImJ_G0025799.1 mouse_genomes_project 2 69391643 69566086 - MGP_129S1SvImJ_P0055128 Lrp2 protein_coding protein_coding MGP_129S1SvImJ_T0055129.1 MGP_129S1SvImJ_G0025799.1 mouse_genomes_project 2 69476344 69566050 - MGP_129S1SvImJ_P0055129 Lrp2 protein_coding protein_coding MGP_129S1SvImJ_T0055130.1 MGP_129S1SvImJ_G0025799.1 mouse_genomes_project 2 69477763 69479286 - Lrp2 protein_coding processed_transcript MGP_129S1SvImJ_T0055131.1 MGP_129S1SvImJ_G0025799.1 mouse_genomes_project 2 69496443 69566050 - MGP_129S1SvImJ_P0055131 Lrp2 protein_coding protein_coding MGP_129S1SvImJ_T0100951.1 MGP_129S1SvImJ_G0039018.1 mouse_genomes_project 2 86184644 86184788 + Gm23716 snoRNA snoRNA MGP_129S1SvImJ_T0056649.1 MGP_129S1SvImJ_G0026264.1 mouse_genomes_project 2 113919950 113920847 + MGP_129S1SvImJ_P0056649 Olfr1289 protein_coding protein_coding MGP_129S1SvImJ_T0052720.1 MGP_129S1SvImJ_G0025370.1 mouse_genomes_project 2 15663651 15664193 - MGP_129S1SvImJ_P0052720 H2afb1 protein_coding protein_coding MGP_129S1SvImJ_T0099702.1 MGP_129S1SvImJ_G0037769.1 mouse_genomes_project 2 137248654 137248761 - Gm25258 snRNA snRNA MGP_129S1SvImJ_T0102431.1 MGP_129S1SvImJ_G0040265.1 mouse_genomes_project 2 91290806 91291736 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0100938.1 MGP_129S1SvImJ_G0039005.1 mouse_genomes_project 2 48568327 48568448 - Gm25215 snoRNA snoRNA MGP_129S1SvImJ_T0059333.1 MGP_129S1SvImJ_G0026899.1 mouse_genomes_project 2 171611912 171699654 + MGP_129S1SvImJ_P0059333 Ncoa3 protein_coding protein_coding MGP_129S1SvImJ_T0059334.1 MGP_129S1SvImJ_G0026899.1 mouse_genomes_project 2 171611913 171703641 + MGP_129S1SvImJ_P0059334 Ncoa3 protein_coding protein_coding MGP_129S1SvImJ_T0059335.1 MGP_129S1SvImJ_G0026899.1 mouse_genomes_project 2 171671152 171675615 + Ncoa3 protein_coding processed_transcript MGP_129S1SvImJ_T0059336.1 MGP_129S1SvImJ_G0026899.1 mouse_genomes_project 2 171687232 171692606 + Ncoa3 protein_coding retained_intron MGP_129S1SvImJ_T0059337.1 MGP_129S1SvImJ_G0026899.1 mouse_genomes_project 2 171693853 171698387 + Ncoa3 protein_coding retained_intron MGP_129S1SvImJ_T0052788.1 MGP_129S1SvImJ_G0025385.1 mouse_genomes_project 2 17669513 18527892 + MGP_129S1SvImJ_P0052788 Etl4 protein_coding protein_coding MGP_129S1SvImJ_T0052789.1 MGP_129S1SvImJ_G0025385.1 mouse_genomes_project 2 18034302 18433737 + MGP_129S1SvImJ_P0052789 Etl4 protein_coding protein_coding MGP_129S1SvImJ_T0052790.1 MGP_129S1SvImJ_G0025385.1 mouse_genomes_project 2 18034302 18590324 + MGP_129S1SvImJ_P0052790 Etl4 protein_coding protein_coding MGP_129S1SvImJ_T0052791.1 MGP_129S1SvImJ_G0025385.1 mouse_genomes_project 2 18085123 18433603 + MGP_129S1SvImJ_P0052791 Etl4 protein_coding protein_coding MGP_129S1SvImJ_T0052792.1 MGP_129S1SvImJ_G0025385.1 mouse_genomes_project 2 18270064 18590313 + MGP_129S1SvImJ_P0052792 Etl4 protein_coding protein_coding MGP_129S1SvImJ_T0052793.1 MGP_129S1SvImJ_G0025385.1 mouse_genomes_project 2 18270064 18590313 + MGP_129S1SvImJ_P0052793 Etl4 protein_coding protein_coding MGP_129S1SvImJ_T0052794.1 MGP_129S1SvImJ_G0025385.1 mouse_genomes_project 2 18280929 18589674 + MGP_129S1SvImJ_P0052794 Etl4 protein_coding protein_coding MGP_129S1SvImJ_T0052795.1 MGP_129S1SvImJ_G0025385.1 mouse_genomes_project 2 18280949 18484089 + Etl4 protein_coding retained_intron MGP_129S1SvImJ_T0052796.1 MGP_129S1SvImJ_G0025385.1 mouse_genomes_project 2 18280966 18590325 + MGP_129S1SvImJ_P0052796 Etl4 protein_coding protein_coding MGP_129S1SvImJ_T0052797.1 MGP_129S1SvImJ_G0025385.1 mouse_genomes_project 2 18309999 18481761 + Etl4 protein_coding processed_transcript MGP_129S1SvImJ_T0052798.1 MGP_129S1SvImJ_G0025385.1 mouse_genomes_project 2 18310041 18434001 + Etl4 protein_coding processed_transcript MGP_129S1SvImJ_T0052799.1 MGP_129S1SvImJ_G0025385.1 mouse_genomes_project 2 18323853 18481851 + Etl4 protein_coding processed_transcript MGP_129S1SvImJ_T0052800.1 MGP_129S1SvImJ_G0025385.1 mouse_genomes_project 2 18485521 18527062 + Etl4 protein_coding processed_transcript MGP_129S1SvImJ_T0052801.1 MGP_129S1SvImJ_G0025385.1 mouse_genomes_project 2 18494578 18583219 + Etl4 protein_coding retained_intron MGP_129S1SvImJ_T0052802.1 MGP_129S1SvImJ_G0025385.1 mouse_genomes_project 2 18494578 18568763 + Etl4 protein_coding retained_intron MGP_129S1SvImJ_T0052803.1 MGP_129S1SvImJ_G0025385.1 mouse_genomes_project 2 18494825 18587979 + MGP_129S1SvImJ_P0052803 Etl4 protein_coding protein_coding MGP_129S1SvImJ_T0052804.1 MGP_129S1SvImJ_G0025385.1 mouse_genomes_project 2 18516441 18590502 + MGP_129S1SvImJ_P0052804 Etl4 protein_coding protein_coding MGP_129S1SvImJ_T0052805.1 MGP_129S1SvImJ_G0025385.1 mouse_genomes_project 2 18516441 18590143 + MGP_129S1SvImJ_P0052805 Etl4 protein_coding protein_coding MGP_129S1SvImJ_T0052806.1 MGP_129S1SvImJ_G0025385.1 mouse_genomes_project 2 18578502 18588670 + Etl4 protein_coding processed_transcript MGP_129S1SvImJ_T0052807.1 MGP_129S1SvImJ_G0025385.1 mouse_genomes_project 2 18587242 18590313 + Etl4 protein_coding retained_intron MGP_129S1SvImJ_T0007388.1 MGP_129S1SvImJ_G0006061.1 mouse_genomes_project 2 167947230 167948305 + Gm14246 lincRNA lincRNA MGP_129S1SvImJ_T0001099.1 MGP_129S1SvImJ_G0001028.1 mouse_genomes_project 2 37639285 37642648 + TEC TEC MGP_129S1SvImJ_T0010371.1 MGP_129S1SvImJ_G0008487.1 mouse_genomes_project 2 7866777 7866897 + miRNA miRNA MGP_129S1SvImJ_T0058029.1 MGP_129S1SvImJ_G0026585.1 mouse_genomes_project 2 148454505 148459229 + MGP_129S1SvImJ_P0058029 Pet117 protein_coding protein_coding MGP_129S1SvImJ_T0010508.1 MGP_129S1SvImJ_G0008624.1 mouse_genomes_project 2 187460509 187460577 + Mir124a-3 miRNA miRNA MGP_129S1SvImJ_T0010361.1 MGP_129S1SvImJ_G0008477.1 mouse_genomes_project 2 7831317 7831411 + Mir466f-3 miRNA miRNA MGP_129S1SvImJ_T0017876.1 MGP_129S1SvImJ_G0015459.1 mouse_genomes_project 2 120931958 120958485 - Gm29232 processed_transcript processed_transcript MGP_129S1SvImJ_T0054249.1 MGP_129S1SvImJ_G0025628.1 mouse_genomes_project 2 31463712 31467864 + MGP_129S1SvImJ_P0054249 Rpl12 protein_coding protein_coding MGP_129S1SvImJ_T0054250.1 MGP_129S1SvImJ_G0025628.1 mouse_genomes_project 2 31463873 31468713 + Rpl12 protein_coding retained_intron MGP_129S1SvImJ_T0054251.1 MGP_129S1SvImJ_G0025628.1 mouse_genomes_project 2 31463882 31467413 + Rpl12 protein_coding retained_intron MGP_129S1SvImJ_T0054252.1 MGP_129S1SvImJ_G0025628.1 mouse_genomes_project 2 31463885 31465092 + Rpl12 protein_coding retained_intron MGP_129S1SvImJ_T0054253.1 MGP_129S1SvImJ_G0025628.1 mouse_genomes_project 2 31463893 31465465 + Rpl12 protein_coding retained_intron MGP_129S1SvImJ_T0054254.1 MGP_129S1SvImJ_G0025628.1 mouse_genomes_project 2 31463893 31467411 + MGP_129S1SvImJ_P0054254 Rpl12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054255.1 MGP_129S1SvImJ_G0025628.1 mouse_genomes_project 2 31464419 31465220 + Rpl12 protein_coding retained_intron MGP_129S1SvImJ_T0017782.1 MGP_129S1SvImJ_G0015403.1 mouse_genomes_project 2 24411589 24412763 + Gm13568 processed_transcript processed_transcript MGP_129S1SvImJ_T0053176.1 MGP_129S1SvImJ_G0025449.1 mouse_genomes_project 2 23355297 23360269 - MGP_129S1SvImJ_P0053176 Ptgds protein_coding protein_coding MGP_129S1SvImJ_T0053177.1 MGP_129S1SvImJ_G0025449.1 mouse_genomes_project 2 23355297 23360065 - MGP_129S1SvImJ_P0053177 Ptgds protein_coding protein_coding MGP_129S1SvImJ_T0053178.1 MGP_129S1SvImJ_G0025449.1 mouse_genomes_project 2 23355297 23359972 - MGP_129S1SvImJ_P0053178 Ptgds protein_coding protein_coding MGP_129S1SvImJ_T0053179.1 MGP_129S1SvImJ_G0025449.1 mouse_genomes_project 2 23355299 23359606 - Ptgds protein_coding retained_intron MGP_129S1SvImJ_T0053180.1 MGP_129S1SvImJ_G0025449.1 mouse_genomes_project 2 23355300 23359380 - Ptgds protein_coding processed_transcript MGP_129S1SvImJ_T0058257.1 MGP_129S1SvImJ_G0026644.1 mouse_genomes_project 2 156195184 156200513 + MGP_129S1SvImJ_P0058257 Tmem74b protein_coding protein_coding MGP_129S1SvImJ_T0058258.1 MGP_129S1SvImJ_G0026644.1 mouse_genomes_project 2 156195487 156205467 + MGP_129S1SvImJ_P0058258 Tmem74b protein_coding protein_coding MGP_129S1SvImJ_T0013664.1 MGP_129S1SvImJ_G0011753.1 mouse_genomes_project 2 88621150 88622000 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017793.1 MGP_129S1SvImJ_G0015411.1 mouse_genomes_project 2 29458001 29463785 - D330023K18Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017794.1 MGP_129S1SvImJ_G0015411.1 mouse_genomes_project 2 29462134 29463785 - D330023K18Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0052702.1 MGP_129S1SvImJ_G0025368.1 mouse_genomes_project 2 13958525 14378997 + MGP_129S1SvImJ_P0052702 Plxdc2 protein_coding protein_coding MGP_129S1SvImJ_T0052703.1 MGP_129S1SvImJ_G0025368.1 mouse_genomes_project 2 13959108 14374847 + MGP_129S1SvImJ_P0052703 Plxdc2 protein_coding protein_coding MGP_129S1SvImJ_T0052704.1 MGP_129S1SvImJ_G0025368.1 mouse_genomes_project 2 13959338 14375015 + MGP_129S1SvImJ_P0052704 Plxdc2 protein_coding protein_coding MGP_129S1SvImJ_T0052705.1 MGP_129S1SvImJ_G0025368.1 mouse_genomes_project 2 14249386 14374848 + Plxdc2 protein_coding processed_transcript MGP_129S1SvImJ_T0013648.1 MGP_129S1SvImJ_G0011737.1 mouse_genomes_project 2 85984215 85984436 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013869.1 MGP_129S1SvImJ_G0011958.1 mouse_genomes_project 2 168077947 168078280 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010456.1 MGP_129S1SvImJ_G0008572.1 mouse_genomes_project 2 96088630 96088711 - Gm44461 miRNA miRNA MGP_129S1SvImJ_T0059160.1 MGP_129S1SvImJ_G0026861.1 mouse_genomes_project 2 170063916 170091995 - MGP_129S1SvImJ_P0059160 Wfdc8 protein_coding protein_coding MGP_129S1SvImJ_T0059161.1 MGP_129S1SvImJ_G0026861.1 mouse_genomes_project 2 170063924 170087467 - MGP_129S1SvImJ_P0059161 Wfdc8 protein_coding protein_coding MGP_129S1SvImJ_T0059162.1 MGP_129S1SvImJ_G0026861.1 mouse_genomes_project 2 170064671 170091995 - MGP_129S1SvImJ_P0059162 Wfdc8 protein_coding protein_coding MGP_129S1SvImJ_T0059514.1 MGP_129S1SvImJ_G0026935.1 mouse_genomes_project 2 176533572 176547730 - MGP_129S1SvImJ_P0059514 Cyp24a1 protein_coding protein_coding MGP_129S1SvImJ_T0059082.1 MGP_129S1SvImJ_G0026829.1 mouse_genomes_project 2 169089071 169114702 - MGP_129S1SvImJ_P0059082 Ada protein_coding protein_coding MGP_129S1SvImJ_T0059083.1 MGP_129S1SvImJ_G0026829.1 mouse_genomes_project 2 169092542 169093394 - Ada protein_coding processed_transcript MGP_129S1SvImJ_T0007202.1 MGP_129S1SvImJ_G0005907.1 mouse_genomes_project 2 45566689 45591756 - Gm13470 lincRNA lincRNA MGP_129S1SvImJ_T0013728.1 MGP_129S1SvImJ_G0011817.1 mouse_genomes_project 2 112141170 112141777 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099692.1 MGP_129S1SvImJ_G0037759.1 mouse_genomes_project 2 124018980 124019086 - Gm23858 snRNA snRNA MGP_129S1SvImJ_T0100979.1 MGP_129S1SvImJ_G0039046.1 mouse_genomes_project 2 153943203 153943295 - Gm24551 snoRNA snoRNA MGP_129S1SvImJ_T0013468.1 MGP_129S1SvImJ_G0011557.1 mouse_genomes_project 2 20651173 20651713 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055411.1 MGP_129S1SvImJ_G0025859.1 mouse_genomes_project 2 76214133 76318597 + MGP_129S1SvImJ_P0055411 Agps protein_coding protein_coding MGP_129S1SvImJ_T0055412.1 MGP_129S1SvImJ_G0025859.1 mouse_genomes_project 2 76214145 76281531 + MGP_129S1SvImJ_P0055412 Agps protein_coding protein_coding MGP_129S1SvImJ_T0055413.1 MGP_129S1SvImJ_G0025859.1 mouse_genomes_project 2 76214461 76313325 + MGP_129S1SvImJ_P0055413 Agps protein_coding protein_coding MGP_129S1SvImJ_T0055414.1 MGP_129S1SvImJ_G0025859.1 mouse_genomes_project 2 76251680 76262279 + MGP_129S1SvImJ_P0055414 Agps protein_coding protein_coding MGP_129S1SvImJ_T0055415.1 MGP_129S1SvImJ_G0025859.1 mouse_genomes_project 2 76257241 76278114 + Agps protein_coding processed_transcript MGP_129S1SvImJ_T0055416.1 MGP_129S1SvImJ_G0025859.1 mouse_genomes_project 2 76280431 76313395 + MGP_129S1SvImJ_P0055416 Agps protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055417.1 MGP_129S1SvImJ_G0025859.1 mouse_genomes_project 2 76295452 76297951 + Agps protein_coding retained_intron MGP_129S1SvImJ_T0058103.1 MGP_129S1SvImJ_G0026598.1 mouse_genomes_project 2 150403168 150406352 + MGP_129S1SvImJ_P0058103 Insm1 protein_coding protein_coding MGP_129S1SvImJ_T0054814.1 MGP_129S1SvImJ_G0025743.1 mouse_genomes_project 2 56593123 56601292 - MGP_129S1SvImJ_P0054814 Nr4a2 protein_coding protein_coding MGP_129S1SvImJ_T0054815.1 MGP_129S1SvImJ_G0025743.1 mouse_genomes_project 2 56593127 56610187 - MGP_129S1SvImJ_P0054815 Nr4a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054816.1 MGP_129S1SvImJ_G0025743.1 mouse_genomes_project 2 56598310 56601348 - Nr4a2 protein_coding processed_transcript MGP_129S1SvImJ_T0054817.1 MGP_129S1SvImJ_G0025743.1 mouse_genomes_project 2 56599299 56600683 - Nr4a2 protein_coding processed_transcript MGP_129S1SvImJ_T0054503.1 MGP_129S1SvImJ_G0025686.1 mouse_genomes_project 2 35762692 35763661 - MGP_129S1SvImJ_P0054503 Olfr361 protein_coding protein_coding MGP_129S1SvImJ_T0057524.1 MGP_129S1SvImJ_G0026466.1 mouse_genomes_project 2 130991665 131017163 - MGP_129S1SvImJ_P0057524 Mall protein_coding protein_coding MGP_129S1SvImJ_T0004067.1 MGP_129S1SvImJ_G0003610.1 mouse_genomes_project 2 107702937 107843961 - Pax6os1 antisense antisense MGP_129S1SvImJ_T0004068.1 MGP_129S1SvImJ_G0003610.1 mouse_genomes_project 2 107703777 107843911 - Pax6os1 antisense antisense MGP_129S1SvImJ_T0058893.1 MGP_129S1SvImJ_G0026787.1 mouse_genomes_project 2 163024549 163074590 - MGP_129S1SvImJ_P0058893 Tti1 protein_coding protein_coding MGP_129S1SvImJ_T0058894.1 MGP_129S1SvImJ_G0026787.1 mouse_genomes_project 2 163024558 163052383 - MGP_129S1SvImJ_P0058894 Tti1 protein_coding protein_coding MGP_129S1SvImJ_T0058895.1 MGP_129S1SvImJ_G0026787.1 mouse_genomes_project 2 163038027 163050233 - Tti1 protein_coding processed_transcript MGP_129S1SvImJ_T0058896.1 MGP_129S1SvImJ_G0026787.1 mouse_genomes_project 2 163051790 163054321 - MGP_129S1SvImJ_P0058896 Tti1 protein_coding protein_coding MGP_129S1SvImJ_T0004107.1 MGP_129S1SvImJ_G0003639.1 mouse_genomes_project 2 135103462 135105028 + Gm14285 antisense antisense MGP_129S1SvImJ_T0010372.1 MGP_129S1SvImJ_G0008488.1 mouse_genomes_project 2 7867084 7867186 + Gm24342 miRNA miRNA MGP_129S1SvImJ_T0013472.1 MGP_129S1SvImJ_G0011561.1 mouse_genomes_project 2 21273600 21274025 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054982.1 MGP_129S1SvImJ_G0025770.1 mouse_genomes_project 2 62158706 62167840 - MGP_129S1SvImJ_P0054982 Gcg protein_coding protein_coding MGP_129S1SvImJ_T0054983.1 MGP_129S1SvImJ_G0025770.1 mouse_genomes_project 2 62159922 62167835 - MGP_129S1SvImJ_P0054983 Gcg protein_coding protein_coding MGP_129S1SvImJ_T0054984.1 MGP_129S1SvImJ_G0025770.1 mouse_genomes_project 2 62160760 62164868 - Gcg protein_coding processed_transcript MGP_129S1SvImJ_T0053534.1 MGP_129S1SvImJ_G0025520.1 mouse_genomes_project 2 26502316 26506020 + Ppp1r26 protein_coding processed_transcript MGP_129S1SvImJ_T0053535.1 MGP_129S1SvImJ_G0025520.1 mouse_genomes_project 2 26502382 26506344 + Ppp1r26 protein_coding processed_transcript MGP_129S1SvImJ_T0053536.1 MGP_129S1SvImJ_G0025520.1 mouse_genomes_project 2 26503455 26506180 + Ppp1r26 protein_coding processed_transcript MGP_129S1SvImJ_T0053537.1 MGP_129S1SvImJ_G0025520.1 mouse_genomes_project 2 26503455 26511030 + MGP_129S1SvImJ_P0053537 Ppp1r26 protein_coding protein_coding MGP_129S1SvImJ_T0053538.1 MGP_129S1SvImJ_G0025520.1 mouse_genomes_project 2 26503455 26511027 + MGP_129S1SvImJ_P0053538 Ppp1r26 protein_coding protein_coding MGP_129S1SvImJ_T0004178.1 MGP_129S1SvImJ_G0003693.1 mouse_genomes_project 2 169902717 169903784 - Gm14302 antisense antisense MGP_129S1SvImJ_T0010490.1 MGP_129S1SvImJ_G0008606.1 mouse_genomes_project 2 164188290 164188383 + Gm44319 miRNA miRNA MGP_129S1SvImJ_T0010476.1 MGP_129S1SvImJ_G0008592.1 mouse_genomes_project 2 134541757 134541837 - Mir6973b miRNA miRNA MGP_129S1SvImJ_T0017849.1 MGP_129S1SvImJ_G0015447.1 mouse_genomes_project 2 95502151 95505693 + Alkbh3os1 processed_transcript processed_transcript MGP_129S1SvImJ_T0059184.1 MGP_129S1SvImJ_G0026873.1 mouse_genomes_project 2 170286953 170293588 + MGP_129S1SvImJ_P0059184 Snx21 protein_coding protein_coding MGP_129S1SvImJ_T0059185.1 MGP_129S1SvImJ_G0026873.1 mouse_genomes_project 2 170287121 170294911 + MGP_129S1SvImJ_P0059185 Snx21 protein_coding protein_coding MGP_129S1SvImJ_T0059186.1 MGP_129S1SvImJ_G0026873.1 mouse_genomes_project 2 170287121 170294153 + MGP_129S1SvImJ_P0059186 Snx21 protein_coding protein_coding MGP_129S1SvImJ_T0059187.1 MGP_129S1SvImJ_G0026873.1 mouse_genomes_project 2 170287147 170288743 + MGP_129S1SvImJ_P0059187 Snx21 protein_coding protein_coding MGP_129S1SvImJ_T0059188.1 MGP_129S1SvImJ_G0026873.1 mouse_genomes_project 2 170287904 170293725 + MGP_129S1SvImJ_P0059188 Snx21 protein_coding protein_coding MGP_129S1SvImJ_T0059189.1 MGP_129S1SvImJ_G0026873.1 mouse_genomes_project 2 170291511 170294917 + Snx21 protein_coding retained_intron MGP_129S1SvImJ_T0059190.1 MGP_129S1SvImJ_G0026873.1 mouse_genomes_project 2 170292752 170294909 + Snx21 protein_coding processed_transcript MGP_129S1SvImJ_T0011514.1 MGP_129S1SvImJ_G0009630.1 mouse_genomes_project 2 34767718 34767861 - Gm27953 misc_RNA misc_RNA MGP_129S1SvImJ_T0017839.1 MGP_129S1SvImJ_G0015442.1 mouse_genomes_project 2 92344820 92354661 - Gm13778 processed_transcript processed_transcript MGP_129S1SvImJ_T0017840.1 MGP_129S1SvImJ_G0015442.1 mouse_genomes_project 2 92345123 92354676 - Gm13778 processed_transcript processed_transcript MGP_129S1SvImJ_T0017877.1 MGP_129S1SvImJ_G0015460.1 mouse_genomes_project 2 122070953 122075288 - Gm14207 processed_transcript processed_transcript MGP_129S1SvImJ_T0017878.1 MGP_129S1SvImJ_G0015460.1 mouse_genomes_project 2 122070953 122075939 - Gm14207 processed_transcript processed_transcript MGP_129S1SvImJ_T0017879.1 MGP_129S1SvImJ_G0015460.1 mouse_genomes_project 2 122071113 122075309 - Gm14207 processed_transcript processed_transcript MGP_129S1SvImJ_T0058540.1 MGP_129S1SvImJ_G0026731.1 mouse_genomes_project 2 160085848 160087625 + MGP_129S1SvImJ_P0058540 Map1lc3a protein_coding protein_coding MGP_129S1SvImJ_T0058541.1 MGP_129S1SvImJ_G0026731.1 mouse_genomes_project 2 160086094 160087622 + Map1lc3a protein_coding processed_transcript MGP_129S1SvImJ_T0058542.1 MGP_129S1SvImJ_G0026731.1 mouse_genomes_project 2 160086440 160087620 + Map1lc3a protein_coding processed_transcript MGP_129S1SvImJ_T0013731.1 MGP_129S1SvImJ_G0011820.1 mouse_genomes_project 2 113575447 113580217 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007402.1 MGP_129S1SvImJ_G0006074.1 mouse_genomes_project 2 172157479 172160954 - Gm14267 lincRNA lincRNA MGP_129S1SvImJ_T0013614.1 MGP_129S1SvImJ_G0011703.1 mouse_genomes_project 2 75216309 75216944 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055850.1 MGP_129S1SvImJ_G0026045.1 mouse_genomes_project 2 89215191 89216318 - MGP_129S1SvImJ_P0055850 Olfr1167 protein_coding protein_coding MGP_129S1SvImJ_T0013760.1 MGP_129S1SvImJ_G0011849.1 mouse_genomes_project 2 128245097 128245197 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013720.1 MGP_129S1SvImJ_G0011809.1 mouse_genomes_project 2 109153942 109154548 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055916.1 MGP_129S1SvImJ_G0026101.1 mouse_genomes_project 2 90775189 90776113 - MGP_129S1SvImJ_P0055916 Olfr1245 protein_coding protein_coding MGP_129S1SvImJ_T0056916.1 MGP_129S1SvImJ_G0026349.1 mouse_genomes_project 2 122498777 122562114 + MGP_129S1SvImJ_P0056916 Rtf1 protein_coding protein_coding MGP_129S1SvImJ_T0056917.1 MGP_129S1SvImJ_G0026349.1 mouse_genomes_project 2 122498806 122517605 + Rtf1 protein_coding processed_transcript MGP_129S1SvImJ_T0056918.1 MGP_129S1SvImJ_G0026349.1 mouse_genomes_project 2 122498937 122562110 + MGP_129S1SvImJ_P0056918 Rtf1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0056919.1 MGP_129S1SvImJ_G0026349.1 mouse_genomes_project 2 122536762 122538147 + Rtf1 protein_coding retained_intron MGP_129S1SvImJ_T0056920.1 MGP_129S1SvImJ_G0026349.1 mouse_genomes_project 2 122552433 122553396 + Rtf1 protein_coding retained_intron MGP_129S1SvImJ_T0054923.1 MGP_129S1SvImJ_G0025762.1 mouse_genomes_project 2 60013053 60155950 - MGP_129S1SvImJ_P0054923 Pla2r1 protein_coding protein_coding MGP_129S1SvImJ_T0054924.1 MGP_129S1SvImJ_G0025762.1 mouse_genomes_project 2 60015535 60021294 - Pla2r1 protein_coding processed_transcript MGP_129S1SvImJ_T0054925.1 MGP_129S1SvImJ_G0025762.1 mouse_genomes_project 2 60038270 60040805 - Pla2r1 protein_coding retained_intron MGP_129S1SvImJ_T0054926.1 MGP_129S1SvImJ_G0025762.1 mouse_genomes_project 2 60048436 60155950 - Pla2r1 protein_coding retained_intron MGP_129S1SvImJ_T0054927.1 MGP_129S1SvImJ_G0025762.1 mouse_genomes_project 2 60049298 60052561 - Pla2r1 protein_coding retained_intron MGP_129S1SvImJ_T0054928.1 MGP_129S1SvImJ_G0025762.1 mouse_genomes_project 2 60133439 60155950 - Pla2r1 protein_coding retained_intron MGP_129S1SvImJ_T0007266.1 MGP_129S1SvImJ_G0005962.1 mouse_genomes_project 2 93456360 93460741 - 2900072N19Rik lincRNA lincRNA MGP_129S1SvImJ_T0053526.1 MGP_129S1SvImJ_G0025518.1 mouse_genomes_project 2 26089862 26098370 - MGP_129S1SvImJ_P0053526 Fcnb protein_coding protein_coding MGP_129S1SvImJ_T0053527.1 MGP_129S1SvImJ_G0025518.1 mouse_genomes_project 2 26091583 26098370 - MGP_129S1SvImJ_P0053527 Fcnb protein_coding protein_coding MGP_129S1SvImJ_T0053528.1 MGP_129S1SvImJ_G0025518.1 mouse_genomes_project 2 26093223 26098370 - MGP_129S1SvImJ_P0053528 Fcnb protein_coding protein_coding MGP_129S1SvImJ_T0004135.1 MGP_129S1SvImJ_G0003657.1 mouse_genomes_project 2 149672369 149676701 - Gm14092 antisense antisense MGP_129S1SvImJ_T0017812.1 MGP_129S1SvImJ_G0015422.1 mouse_genomes_project 2 58910021 58914202 - 5330411J11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017813.1 MGP_129S1SvImJ_G0015422.1 mouse_genomes_project 2 58911312 58915740 - 5330411J11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0054500.1 MGP_129S1SvImJ_G0025684.1 mouse_genomes_project 2 35685141 35686134 - MGP_129S1SvImJ_P0054500 Olfr358 protein_coding protein_coding MGP_129S1SvImJ_T0007154.1 MGP_129S1SvImJ_G0005873.1 mouse_genomes_project 2 17080272 17085158 + 4930447M23Rik lincRNA lincRNA MGP_129S1SvImJ_T0007155.1 MGP_129S1SvImJ_G0005873.1 mouse_genomes_project 2 17080793 17087207 + 4930447M23Rik lincRNA lincRNA MGP_129S1SvImJ_T0007156.1 MGP_129S1SvImJ_G0005873.1 mouse_genomes_project 2 17080892 17084892 + 4930447M23Rik lincRNA lincRNA MGP_129S1SvImJ_T0013667.1 MGP_129S1SvImJ_G0011756.1 mouse_genomes_project 2 88930255 88930474 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007138.1 MGP_129S1SvImJ_G0005859.1 mouse_genomes_project 2 4267495 4272236 + Gm26565 lincRNA lincRNA MGP_129S1SvImJ_T0056046.1 MGP_129S1SvImJ_G0026142.1 mouse_genomes_project 2 92424572 92442945 + MGP_129S1SvImJ_P0056046 Mybpc3 protein_coding protein_coding MGP_129S1SvImJ_T0056047.1 MGP_129S1SvImJ_G0026142.1 mouse_genomes_project 2 92424572 92442939 + MGP_129S1SvImJ_P0056047 Mybpc3 protein_coding protein_coding MGP_129S1SvImJ_T0056048.1 MGP_129S1SvImJ_G0026142.1 mouse_genomes_project 2 92424572 92442939 + MGP_129S1SvImJ_P0056048 Mybpc3 protein_coding protein_coding MGP_129S1SvImJ_T0056049.1 MGP_129S1SvImJ_G0026142.1 mouse_genomes_project 2 92424597 92442946 + MGP_129S1SvImJ_P0056049 Mybpc3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0017785.1 MGP_129S1SvImJ_G0015405.1 mouse_genomes_project 2 25885986 25890113 - 2810430I11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0059588.1 MGP_129S1SvImJ_G0026963.1 mouse_genomes_project 2 180446571 180460346 + MGP_129S1SvImJ_P0059588 Npepl1 protein_coding protein_coding MGP_129S1SvImJ_T0059589.1 MGP_129S1SvImJ_G0026963.1 mouse_genomes_project 2 180448430 180457659 + MGP_129S1SvImJ_P0059589 Npepl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059590.1 MGP_129S1SvImJ_G0026963.1 mouse_genomes_project 2 180448456 180459979 + Npepl1 protein_coding retained_intron MGP_129S1SvImJ_T0059591.1 MGP_129S1SvImJ_G0026963.1 mouse_genomes_project 2 180448849 180453380 + Npepl1 protein_coding retained_intron MGP_129S1SvImJ_T0056646.1 MGP_129S1SvImJ_G0026261.1 mouse_genomes_project 2 113796696 113797632 + MGP_129S1SvImJ_P0056646 protein_coding protein_coding MGP_129S1SvImJ_T0054191.1 MGP_129S1SvImJ_G0025618.1 mouse_genomes_project 2 31189422 31199608 - MGP_129S1SvImJ_P0054191 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0054192.1 MGP_129S1SvImJ_G0025618.1 mouse_genomes_project 2 31190442 31197645 - protein_coding retained_intron MGP_129S1SvImJ_T0054193.1 MGP_129S1SvImJ_G0025618.1 mouse_genomes_project 2 31194512 31199674 - MGP_129S1SvImJ_P0054193 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054194.1 MGP_129S1SvImJ_G0025618.1 mouse_genomes_project 2 31194698 31196319 - protein_coding retained_intron MGP_129S1SvImJ_T0054195.1 MGP_129S1SvImJ_G0025618.1 mouse_genomes_project 2 31196129 31196947 - protein_coding retained_intron MGP_129S1SvImJ_T0054196.1 MGP_129S1SvImJ_G0025618.1 mouse_genomes_project 2 31196253 31197100 - protein_coding retained_intron MGP_129S1SvImJ_T0054197.1 MGP_129S1SvImJ_G0025618.1 mouse_genomes_project 2 31196453 31199355 - MGP_129S1SvImJ_P0054197 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054198.1 MGP_129S1SvImJ_G0025618.1 mouse_genomes_project 2 31196755 31198851 - MGP_129S1SvImJ_P0054198 protein_coding protein_coding MGP_129S1SvImJ_T0013751.1 MGP_129S1SvImJ_G0011840.1 mouse_genomes_project 2 122721251 122721586 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011539.1 MGP_129S1SvImJ_G0009655.1 mouse_genomes_project 2 161267209 161267425 + Gm22316 misc_RNA misc_RNA MGP_129S1SvImJ_T0013560.1 MGP_129S1SvImJ_G0011649.1 mouse_genomes_project 2 56712978 56713167 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055923.1 MGP_129S1SvImJ_G0026106.1 mouse_genomes_project 2 90865226 90866311 - MGP_129S1SvImJ_P0055923 Olfr1250 protein_coding protein_coding MGP_129S1SvImJ_T0056873.1 MGP_129S1SvImJ_G0026336.1 mouse_genomes_project 2 121944391 121946313 + Zfyve19 protein_coding processed_transcript MGP_129S1SvImJ_T0056874.1 MGP_129S1SvImJ_G0026336.1 mouse_genomes_project 2 121944786 121946376 + Zfyve19 protein_coding processed_transcript MGP_129S1SvImJ_T0056875.1 MGP_129S1SvImJ_G0026336.1 mouse_genomes_project 2 121944806 121947539 + Zfyve19 protein_coding processed_transcript MGP_129S1SvImJ_T0056876.1 MGP_129S1SvImJ_G0026336.1 mouse_genomes_project 2 121944815 121946917 + Zfyve19 protein_coding retained_intron MGP_129S1SvImJ_T0056877.1 MGP_129S1SvImJ_G0026336.1 mouse_genomes_project 2 121944904 121954309 + MGP_129S1SvImJ_P0056877 Zfyve19 protein_coding protein_coding MGP_129S1SvImJ_T0056878.1 MGP_129S1SvImJ_G0026336.1 mouse_genomes_project 2 121946611 121952144 + Zfyve19 protein_coding retained_intron MGP_129S1SvImJ_T0056879.1 MGP_129S1SvImJ_G0026336.1 mouse_genomes_project 2 121947235 121947493 + Zfyve19 protein_coding processed_transcript MGP_129S1SvImJ_T0056880.1 MGP_129S1SvImJ_G0026336.1 mouse_genomes_project 2 121947414 121952166 + Zfyve19 protein_coding retained_intron MGP_129S1SvImJ_T0056881.1 MGP_129S1SvImJ_G0026336.1 mouse_genomes_project 2 121951710 121953652 + Zfyve19 protein_coding retained_intron MGP_129S1SvImJ_T0056882.1 MGP_129S1SvImJ_G0026336.1 mouse_genomes_project 2 121953519 121954304 + Zfyve19 protein_coding retained_intron MGP_129S1SvImJ_T0003943.1 MGP_129S1SvImJ_G0003523.1 mouse_genomes_project 2 23709479 23711807 + antisense antisense MGP_129S1SvImJ_T0007419.1 MGP_129S1SvImJ_G0006087.1 mouse_genomes_project 2 175060184 175064146 + Gm14258 lincRNA lincRNA MGP_129S1SvImJ_T0004152.1 MGP_129S1SvImJ_G0003673.1 mouse_genomes_project 2 160426994 160428694 + Gssos2 antisense antisense MGP_129S1SvImJ_T0004153.1 MGP_129S1SvImJ_G0003673.1 mouse_genomes_project 2 160427750 160428680 + Gssos2 antisense antisense MGP_129S1SvImJ_T0054921.1 MGP_129S1SvImJ_G0025761.1 mouse_genomes_project 2 59876895 59974181 - MGP_129S1SvImJ_P0054921 Ly75 protein_coding protein_coding MGP_129S1SvImJ_T0054922.1 MGP_129S1SvImJ_G0025761.1 mouse_genomes_project 2 59878552 59974109 - MGP_129S1SvImJ_P0054922 Ly75 protein_coding protein_coding MGP_129S1SvImJ_T0055349.1 MGP_129S1SvImJ_G0025841.1 mouse_genomes_project 2 74107153 74194309 - MGP_129S1SvImJ_P0055349 Atf2 protein_coding protein_coding MGP_129S1SvImJ_T0055350.1 MGP_129S1SvImJ_G0025841.1 mouse_genomes_project 2 74107164 74194298 - Atf2 protein_coding processed_transcript MGP_129S1SvImJ_T0055351.1 MGP_129S1SvImJ_G0025841.1 mouse_genomes_project 2 74109465 74163837 - MGP_129S1SvImJ_P0055351 Atf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055352.1 MGP_129S1SvImJ_G0025841.1 mouse_genomes_project 2 74109565 74164982 - MGP_129S1SvImJ_P0055352 Atf2 protein_coding protein_coding MGP_129S1SvImJ_T0055353.1 MGP_129S1SvImJ_G0025841.1 mouse_genomes_project 2 74119575 74194283 - Atf2 protein_coding processed_transcript MGP_129S1SvImJ_T0055354.1 MGP_129S1SvImJ_G0025841.1 mouse_genomes_project 2 74123017 74194200 - MGP_129S1SvImJ_P0055354 Atf2 protein_coding protein_coding MGP_129S1SvImJ_T0055355.1 MGP_129S1SvImJ_G0025841.1 mouse_genomes_project 2 74144808 74194298 - Atf2 protein_coding processed_transcript MGP_129S1SvImJ_T0055356.1 MGP_129S1SvImJ_G0025841.1 mouse_genomes_project 2 74145378 74194263 - MGP_129S1SvImJ_P0055356 Atf2 protein_coding protein_coding MGP_129S1SvImJ_T0055357.1 MGP_129S1SvImJ_G0025841.1 mouse_genomes_project 2 74145379 74194223 - MGP_129S1SvImJ_P0055357 Atf2 protein_coding protein_coding MGP_129S1SvImJ_T0055358.1 MGP_129S1SvImJ_G0025841.1 mouse_genomes_project 2 74145673 74150542 - Atf2 protein_coding processed_transcript MGP_129S1SvImJ_T0055359.1 MGP_129S1SvImJ_G0025841.1 mouse_genomes_project 2 74163474 74194264 - Atf2 protein_coding processed_transcript MGP_129S1SvImJ_T0055360.1 MGP_129S1SvImJ_G0025841.1 mouse_genomes_project 2 74163567 74194298 - Atf2 protein_coding processed_transcript MGP_129S1SvImJ_T0055361.1 MGP_129S1SvImJ_G0025841.1 mouse_genomes_project 2 74174033 74194220 - Atf2 protein_coding processed_transcript MGP_129S1SvImJ_T0055910.1 MGP_129S1SvImJ_G0026098.1 mouse_genomes_project 2 90680446 90681391 - MGP_129S1SvImJ_P0055910 Olfr1241 protein_coding protein_coding MGP_129S1SvImJ_T0001120.1 MGP_129S1SvImJ_G0001048.1 mouse_genomes_project 2 140470510 140470776 + TEC TEC MGP_129S1SvImJ_T0013733.1 MGP_129S1SvImJ_G0011822.1 mouse_genomes_project 2 114055061 114056000 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013718.1 MGP_129S1SvImJ_G0011807.1 mouse_genomes_project 2 108480601 108480871 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059576.1 MGP_129S1SvImJ_G0026959.1 mouse_genomes_project 2 179962790 180011333 + MGP_129S1SvImJ_P0059576 Rab22a protein_coding protein_coding MGP_129S1SvImJ_T0059577.1 MGP_129S1SvImJ_G0026959.1 mouse_genomes_project 2 179962790 180011305 + MGP_129S1SvImJ_P0059577 Rab22a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059578.1 MGP_129S1SvImJ_G0026959.1 mouse_genomes_project 2 179962886 180005144 + MGP_129S1SvImJ_P0059578 Rab22a protein_coding protein_coding MGP_129S1SvImJ_T0053871.1 MGP_129S1SvImJ_G0025572.1 mouse_genomes_project 2 29072437 29081303 - 1700001O22Rik protein_coding processed_transcript MGP_129S1SvImJ_T0053872.1 MGP_129S1SvImJ_G0025572.1 mouse_genomes_project 2 29072969 29079375 - MGP_129S1SvImJ_P0053872 1700001O22Rik protein_coding protein_coding MGP_129S1SvImJ_T0053873.1 MGP_129S1SvImJ_G0025572.1 mouse_genomes_project 2 29073136 29074333 - 1700001O22Rik protein_coding processed_transcript MGP_129S1SvImJ_T0053874.1 MGP_129S1SvImJ_G0025572.1 mouse_genomes_project 2 29073231 29081329 - 1700001O22Rik protein_coding processed_transcript MGP_129S1SvImJ_T0053875.1 MGP_129S1SvImJ_G0025572.1 mouse_genomes_project 2 29073234 29081312 - 1700001O22Rik protein_coding processed_transcript MGP_129S1SvImJ_T0053876.1 MGP_129S1SvImJ_G0025572.1 mouse_genomes_project 2 29073241 29078669 - 1700001O22Rik protein_coding processed_transcript MGP_129S1SvImJ_T0053877.1 MGP_129S1SvImJ_G0025572.1 mouse_genomes_project 2 29073248 29081325 - 1700001O22Rik protein_coding processed_transcript MGP_129S1SvImJ_T0053878.1 MGP_129S1SvImJ_G0025572.1 mouse_genomes_project 2 29073272 29081311 - 1700001O22Rik protein_coding processed_transcript MGP_129S1SvImJ_T0053879.1 MGP_129S1SvImJ_G0025572.1 mouse_genomes_project 2 29073325 29081312 - 1700001O22Rik protein_coding processed_transcript MGP_129S1SvImJ_T0053880.1 MGP_129S1SvImJ_G0025572.1 mouse_genomes_project 2 29073342 29074544 - 1700001O22Rik protein_coding processed_transcript MGP_129S1SvImJ_T0053881.1 MGP_129S1SvImJ_G0025572.1 mouse_genomes_project 2 29073776 29081312 - 1700001O22Rik protein_coding processed_transcript MGP_129S1SvImJ_T0053882.1 MGP_129S1SvImJ_G0025572.1 mouse_genomes_project 2 29073850 29081312 - 1700001O22Rik protein_coding processed_transcript MGP_129S1SvImJ_T0053883.1 MGP_129S1SvImJ_G0025572.1 mouse_genomes_project 2 29074921 29081291 - 1700001O22Rik protein_coding processed_transcript MGP_129S1SvImJ_T0054139.1 MGP_129S1SvImJ_G0025609.1 mouse_genomes_project 2 31006561 31044194 + Fam102a protein_coding retained_intron MGP_129S1SvImJ_T0054140.1 MGP_129S1SvImJ_G0025609.1 mouse_genomes_project 2 31006562 31007420 + MGP_129S1SvImJ_P0054140 Fam102a protein_coding protein_coding MGP_129S1SvImJ_T0054141.1 MGP_129S1SvImJ_G0025609.1 mouse_genomes_project 2 31006588 31044200 + MGP_129S1SvImJ_P0054141 Fam102a protein_coding protein_coding MGP_129S1SvImJ_T0054142.1 MGP_129S1SvImJ_G0025609.1 mouse_genomes_project 2 31006962 31029331 + MGP_129S1SvImJ_P0054142 Fam102a protein_coding protein_coding MGP_129S1SvImJ_T0054143.1 MGP_129S1SvImJ_G0025609.1 mouse_genomes_project 2 31011419 31031369 + Fam102a protein_coding processed_transcript MGP_129S1SvImJ_T0007129.1 MGP_129S1SvImJ_G0005852.1 mouse_genomes_project 2 875536 898996 + Gm13180 lincRNA lincRNA MGP_129S1SvImJ_T0010397.1 MGP_129S1SvImJ_G0008513.1 mouse_genomes_project 2 22904938 22905005 - Gm24328 miRNA miRNA MGP_129S1SvImJ_T0004158.1 MGP_129S1SvImJ_G0003678.1 mouse_genomes_project 2 161257177 161258247 - Gm14170 antisense antisense MGP_129S1SvImJ_T0059196.1 MGP_129S1SvImJ_G0026875.1 mouse_genomes_project 2 170307588 170324775 + MGP_129S1SvImJ_P0059196 Zswim3 protein_coding protein_coding MGP_129S1SvImJ_T0058553.1 MGP_129S1SvImJ_G0026734.1 mouse_genomes_project 2 160207074 160259847 - MGP_129S1SvImJ_P0058553 Ncoa6 protein_coding protein_coding MGP_129S1SvImJ_T0058554.1 MGP_129S1SvImJ_G0026734.1 mouse_genomes_project 2 160207083 160295232 - MGP_129S1SvImJ_P0058554 Ncoa6 protein_coding protein_coding MGP_129S1SvImJ_T0058555.1 MGP_129S1SvImJ_G0026734.1 mouse_genomes_project 2 160207087 160213051 - Ncoa6 protein_coding retained_intron MGP_129S1SvImJ_T0058556.1 MGP_129S1SvImJ_G0026734.1 mouse_genomes_project 2 160207087 160220525 - Ncoa6 protein_coding retained_intron MGP_129S1SvImJ_T0058557.1 MGP_129S1SvImJ_G0026734.1 mouse_genomes_project 2 160223798 160295320 - MGP_129S1SvImJ_P0058557 Ncoa6 protein_coding protein_coding MGP_129S1SvImJ_T0058558.1 MGP_129S1SvImJ_G0026734.1 mouse_genomes_project 2 160233768 160237285 - Ncoa6 protein_coding processed_transcript MGP_129S1SvImJ_T0058559.1 MGP_129S1SvImJ_G0026734.1 mouse_genomes_project 2 160238657 160259849 - MGP_129S1SvImJ_P0058559 Ncoa6 protein_coding protein_coding MGP_129S1SvImJ_T0058560.1 MGP_129S1SvImJ_G0026734.1 mouse_genomes_project 2 160257078 160295250 - Ncoa6 protein_coding processed_transcript MGP_129S1SvImJ_T0052895.1 MGP_129S1SvImJ_G0025402.1 mouse_genomes_project 2 21846299 21872154 - MGP_129S1SvImJ_P0052895 Tbpl2 protein_coding protein_coding MGP_129S1SvImJ_T0052896.1 MGP_129S1SvImJ_G0025402.1 mouse_genomes_project 2 21846493 21872091 - MGP_129S1SvImJ_P0052896 Tbpl2 protein_coding protein_coding MGP_129S1SvImJ_T0057285.1 MGP_129S1SvImJ_G0026411.1 mouse_genomes_project 2 125300596 125304578 + MGP_129S1SvImJ_P0057285 Duoxa2 protein_coding protein_coding MGP_129S1SvImJ_T0007330.1 MGP_129S1SvImJ_G0006012.1 mouse_genomes_project 2 131511446 131527498 + Gm14009 lincRNA lincRNA MGP_129S1SvImJ_T0010383.1 MGP_129S1SvImJ_G0008499.1 mouse_genomes_project 2 7876825 7876927 + Mir297a-3 miRNA miRNA MGP_129S1SvImJ_T0055825.1 MGP_129S1SvImJ_G0026022.1 mouse_genomes_project 2 88782090 88783023 - MGP_129S1SvImJ_P0055825 Olfr1137 protein_coding protein_coding MGP_129S1SvImJ_T0058136.1 MGP_129S1SvImJ_G0026608.1 mouse_genomes_project 2 152779206 152786153 - MGP_129S1SvImJ_P0058136 Cd93 protein_coding protein_coding MGP_129S1SvImJ_T0013715.1 MGP_129S1SvImJ_G0011804.1 mouse_genomes_project 2 107013798 107014125 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013700.1 MGP_129S1SvImJ_G0011789.1 mouse_genomes_project 2 104067685 104070713 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099041.1 MGP_129S1SvImJ_G0037110.1 mouse_genomes_project 2 187552461 187555826 + 9230112E08Rik sense_overlapping sense_overlapping MGP_129S1SvImJ_T0099042.1 MGP_129S1SvImJ_G0037110.1 mouse_genomes_project 2 187552768 187554131 + 9230112E08Rik sense_overlapping sense_overlapping MGP_129S1SvImJ_T0007326.1 MGP_129S1SvImJ_G0006008.1 mouse_genomes_project 2 127358203 127362649 - 4930583P06Rik lincRNA lincRNA MGP_129S1SvImJ_T0057891.1 MGP_129S1SvImJ_G0026551.1 mouse_genomes_project 2 137213172 137224742 + MGP_129S1SvImJ_P0057891 Bmp2 protein_coding protein_coding MGP_129S1SvImJ_T0058933.1 MGP_129S1SvImJ_G0026795.1 mouse_genomes_project 2 163580086 163585670 + MGP_129S1SvImJ_P0058933 Adig protein_coding protein_coding MGP_129S1SvImJ_T0058934.1 MGP_129S1SvImJ_G0026795.1 mouse_genomes_project 2 163580127 163585670 + MGP_129S1SvImJ_P0058934 Adig protein_coding protein_coding MGP_129S1SvImJ_T0058935.1 MGP_129S1SvImJ_G0026795.1 mouse_genomes_project 2 163580213 163583382 + Adig protein_coding processed_transcript MGP_129S1SvImJ_T0055886.1 MGP_129S1SvImJ_G0026078.1 mouse_genomes_project 2 90192140 90193076 - MGP_129S1SvImJ_P0055886 Olfr1216 protein_coding protein_coding MGP_129S1SvImJ_T0058208.1 MGP_129S1SvImJ_G0026634.1 mouse_genomes_project 2 155384473 155465374 - MGP_129S1SvImJ_P0058208 Ninl protein_coding protein_coding MGP_129S1SvImJ_T0058209.1 MGP_129S1SvImJ_G0026634.1 mouse_genomes_project 2 155386980 155389759 - Ninl protein_coding processed_transcript MGP_129S1SvImJ_T0058210.1 MGP_129S1SvImJ_G0026634.1 mouse_genomes_project 2 155387494 155401653 - MGP_129S1SvImJ_P0058210 Ninl protein_coding protein_coding MGP_129S1SvImJ_T0058211.1 MGP_129S1SvImJ_G0026634.1 mouse_genomes_project 2 155401351 155402785 - Ninl protein_coding retained_intron MGP_129S1SvImJ_T0058212.1 MGP_129S1SvImJ_G0026634.1 mouse_genomes_project 2 155407417 155423915 - MGP_129S1SvImJ_P0058212 Ninl protein_coding protein_coding MGP_129S1SvImJ_T0058213.1 MGP_129S1SvImJ_G0026634.1 mouse_genomes_project 2 155416194 155424049 - Ninl protein_coding processed_transcript MGP_129S1SvImJ_T0058214.1 MGP_129S1SvImJ_G0026634.1 mouse_genomes_project 2 155416286 155465308 - Ninl protein_coding processed_transcript MGP_129S1SvImJ_T0058215.1 MGP_129S1SvImJ_G0026634.1 mouse_genomes_project 2 155419007 155465352 - Ninl protein_coding processed_transcript MGP_129S1SvImJ_T0058216.1 MGP_129S1SvImJ_G0026634.1 mouse_genomes_project 2 155426957 155499735 - MGP_129S1SvImJ_P0058216 Ninl protein_coding protein_coding MGP_129S1SvImJ_T0055778.1 MGP_129S1SvImJ_G0025985.1 mouse_genomes_project 2 87816463 87817453 - MGP_129S1SvImJ_P0055778 protein_coding protein_coding MGP_129S1SvImJ_T0098743.1 MGP_129S1SvImJ_G0036828.1 mouse_genomes_project 2 106062118 106062257 + Gm24644 scaRNA scaRNA MGP_129S1SvImJ_T0004074.1 MGP_129S1SvImJ_G0003615.1 mouse_genomes_project 2 115973670 115977026 - Gm13964 antisense antisense MGP_129S1SvImJ_T0059262.1 MGP_129S1SvImJ_G0026888.1 mouse_genomes_project 2 170645081 170775744 - MGP_129S1SvImJ_P0059262 Cdh22 protein_coding protein_coding MGP_129S1SvImJ_T0059263.1 MGP_129S1SvImJ_G0026888.1 mouse_genomes_project 2 170645901 170719887 - MGP_129S1SvImJ_P0059263 Cdh22 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058952.1 MGP_129S1SvImJ_G0026801.1 mouse_genomes_project 2 163893890 163964579 + MGP_129S1SvImJ_P0058952 Dhx35 protein_coding protein_coding MGP_129S1SvImJ_T0058953.1 MGP_129S1SvImJ_G0026801.1 mouse_genomes_project 2 163893890 163964579 + MGP_129S1SvImJ_P0058953 Dhx35 protein_coding protein_coding MGP_129S1SvImJ_T0058954.1 MGP_129S1SvImJ_G0026801.1 mouse_genomes_project 2 163893945 163964579 + Dhx35 protein_coding processed_transcript MGP_129S1SvImJ_T0058955.1 MGP_129S1SvImJ_G0026801.1 mouse_genomes_project 2 163893948 163947552 + Dhx35 protein_coding retained_intron MGP_129S1SvImJ_T0058956.1 MGP_129S1SvImJ_G0026801.1 mouse_genomes_project 2 163893968 163930359 + MGP_129S1SvImJ_P0058956 Dhx35 protein_coding protein_coding MGP_129S1SvImJ_T0058957.1 MGP_129S1SvImJ_G0026801.1 mouse_genomes_project 2 163893974 163919171 + Dhx35 protein_coding processed_transcript MGP_129S1SvImJ_T0058958.1 MGP_129S1SvImJ_G0026801.1 mouse_genomes_project 2 163895006 163900596 + Dhx35 protein_coding processed_transcript MGP_129S1SvImJ_T0058959.1 MGP_129S1SvImJ_G0026801.1 mouse_genomes_project 2 163928185 163935710 + Dhx35 protein_coding processed_transcript MGP_129S1SvImJ_T0058960.1 MGP_129S1SvImJ_G0026801.1 mouse_genomes_project 2 163951214 163963729 + Dhx35 protein_coding processed_transcript MGP_129S1SvImJ_T0003915.1 MGP_129S1SvImJ_G0003501.1 mouse_genomes_project 2 4069602 4072305 + Gm13389 antisense antisense MGP_129S1SvImJ_T0055233.1 MGP_129S1SvImJ_G0025820.1 mouse_genomes_project 2 71298510 71353113 + MGP_129S1SvImJ_P0055233 Dync1i2 protein_coding protein_coding MGP_129S1SvImJ_T0055234.1 MGP_129S1SvImJ_G0025820.1 mouse_genomes_project 2 71298545 71353109 + MGP_129S1SvImJ_P0055234 Dync1i2 protein_coding protein_coding MGP_129S1SvImJ_T0055235.1 MGP_129S1SvImJ_G0025820.1 mouse_genomes_project 2 71298545 71353118 + MGP_129S1SvImJ_P0055235 Dync1i2 protein_coding protein_coding MGP_129S1SvImJ_T0055236.1 MGP_129S1SvImJ_G0025820.1 mouse_genomes_project 2 71298562 71353106 + MGP_129S1SvImJ_P0055236 Dync1i2 protein_coding protein_coding MGP_129S1SvImJ_T0055237.1 MGP_129S1SvImJ_G0025820.1 mouse_genomes_project 2 71298610 71335507 + Dync1i2 protein_coding processed_transcript MGP_129S1SvImJ_T0055238.1 MGP_129S1SvImJ_G0025820.1 mouse_genomes_project 2 71298638 71353118 + MGP_129S1SvImJ_P0055238 Dync1i2 protein_coding protein_coding MGP_129S1SvImJ_T0055239.1 MGP_129S1SvImJ_G0025820.1 mouse_genomes_project 2 71298776 71353112 + MGP_129S1SvImJ_P0055239 Dync1i2 protein_coding protein_coding MGP_129S1SvImJ_T0055240.1 MGP_129S1SvImJ_G0025820.1 mouse_genomes_project 2 71298788 71352674 + MGP_129S1SvImJ_P0055240 Dync1i2 protein_coding protein_coding MGP_129S1SvImJ_T0055241.1 MGP_129S1SvImJ_G0025820.1 mouse_genomes_project 2 71298796 71353118 + MGP_129S1SvImJ_P0055241 Dync1i2 protein_coding protein_coding MGP_129S1SvImJ_T0055242.1 MGP_129S1SvImJ_G0025820.1 mouse_genomes_project 2 71298808 71318445 + Dync1i2 protein_coding retained_intron MGP_129S1SvImJ_T0055243.1 MGP_129S1SvImJ_G0025820.1 mouse_genomes_project 2 71323274 71350210 + Dync1i2 protein_coding retained_intron MGP_129S1SvImJ_T0055244.1 MGP_129S1SvImJ_G0025820.1 mouse_genomes_project 2 71350361 71352873 + Dync1i2 protein_coding retained_intron MGP_129S1SvImJ_T0057920.1 MGP_129S1SvImJ_G0026556.1 mouse_genomes_project 2 139812924 139820201 + MGP_129S1SvImJ_P0057920 Lamp5 protein_coding protein_coding MGP_129S1SvImJ_T0057921.1 MGP_129S1SvImJ_G0026556.1 mouse_genomes_project 2 139818596 139830504 + MGP_129S1SvImJ_P0057921 Lamp5 protein_coding protein_coding MGP_129S1SvImJ_T0057922.1 MGP_129S1SvImJ_G0026556.1 mouse_genomes_project 2 139818921 139822164 + Lamp5 protein_coding retained_intron MGP_129S1SvImJ_T0057923.1 MGP_129S1SvImJ_G0026556.1 mouse_genomes_project 2 139818921 139819883 + Lamp5 protein_coding processed_transcript MGP_129S1SvImJ_T0057924.1 MGP_129S1SvImJ_G0026556.1 mouse_genomes_project 2 139820100 139830492 + Lamp5 protein_coding processed_transcript MGP_129S1SvImJ_T0059091.1 MGP_129S1SvImJ_G0026834.1 mouse_genomes_project 2 169395529 169429657 + MGP_129S1SvImJ_P0059091 Pabpc1l protein_coding protein_coding MGP_129S1SvImJ_T0059092.1 MGP_129S1SvImJ_G0026834.1 mouse_genomes_project 2 169402994 169415673 + Pabpc1l protein_coding processed_transcript MGP_129S1SvImJ_T0059093.1 MGP_129S1SvImJ_G0026834.1 mouse_genomes_project 2 169410347 169415900 + Pabpc1l protein_coding processed_transcript MGP_129S1SvImJ_T0059094.1 MGP_129S1SvImJ_G0026834.1 mouse_genomes_project 2 169425157 169429657 + Pabpc1l protein_coding processed_transcript MGP_129S1SvImJ_T0059095.1 MGP_129S1SvImJ_G0026834.1 mouse_genomes_project 2 169427128 169429286 + Pabpc1l protein_coding processed_transcript MGP_129S1SvImJ_T0057821.1 MGP_129S1SvImJ_G0026534.1 mouse_genomes_project 2 135469976 135491221 + MGP_129S1SvImJ_P0057821 Prnp protein_coding protein_coding MGP_129S1SvImJ_T0013650.1 MGP_129S1SvImJ_G0011739.1 mouse_genomes_project 2 86595337 86595533 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013616.1 MGP_129S1SvImJ_G0011705.1 mouse_genomes_project 2 76188508 76188937 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013518.1 MGP_129S1SvImJ_G0011607.1 mouse_genomes_project 2 38379638 38380735 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007133.1 MGP_129S1SvImJ_G0005856.1 mouse_genomes_project 2 3281851 3291017 + Gm10857 lincRNA lincRNA MGP_129S1SvImJ_T0007134.1 MGP_129S1SvImJ_G0005856.1 mouse_genomes_project 2 3281865 3290962 + Gm10857 lincRNA lincRNA MGP_129S1SvImJ_T0058763.1 MGP_129S1SvImJ_G0026764.1 mouse_genomes_project 2 161314961 161446318 + MGP_129S1SvImJ_P0058763 Epb41l1 protein_coding protein_coding MGP_129S1SvImJ_T0058764.1 MGP_129S1SvImJ_G0026764.1 mouse_genomes_project 2 161315100 161446318 + MGP_129S1SvImJ_P0058764 Epb41l1 protein_coding protein_coding MGP_129S1SvImJ_T0058765.1 MGP_129S1SvImJ_G0026764.1 mouse_genomes_project 2 161315104 161404026 + Epb41l1 protein_coding processed_transcript MGP_129S1SvImJ_T0058766.1 MGP_129S1SvImJ_G0026764.1 mouse_genomes_project 2 161315136 161426034 + MGP_129S1SvImJ_P0058766 Epb41l1 protein_coding protein_coding MGP_129S1SvImJ_T0058767.1 MGP_129S1SvImJ_G0026764.1 mouse_genomes_project 2 161315153 161446318 + MGP_129S1SvImJ_P0058767 Epb41l1 protein_coding protein_coding MGP_129S1SvImJ_T0058768.1 MGP_129S1SvImJ_G0026764.1 mouse_genomes_project 2 161315164 161446318 + MGP_129S1SvImJ_P0058768 Epb41l1 protein_coding protein_coding MGP_129S1SvImJ_T0058769.1 MGP_129S1SvImJ_G0026764.1 mouse_genomes_project 2 161374892 161401273 + Epb41l1 protein_coding processed_transcript MGP_129S1SvImJ_T0058770.1 MGP_129S1SvImJ_G0026764.1 mouse_genomes_project 2 161376891 161446318 + MGP_129S1SvImJ_P0058770 Epb41l1 protein_coding protein_coding MGP_129S1SvImJ_T0058771.1 MGP_129S1SvImJ_G0026764.1 mouse_genomes_project 2 161395462 161446318 + MGP_129S1SvImJ_P0058771 Epb41l1 protein_coding protein_coding MGP_129S1SvImJ_T0058772.1 MGP_129S1SvImJ_G0026764.1 mouse_genomes_project 2 161395507 161446318 + MGP_129S1SvImJ_P0058772 Epb41l1 protein_coding protein_coding MGP_129S1SvImJ_T0058773.1 MGP_129S1SvImJ_G0026764.1 mouse_genomes_project 2 161395522 161446324 + MGP_129S1SvImJ_P0058773 Epb41l1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0058774.1 MGP_129S1SvImJ_G0026764.1 mouse_genomes_project 2 161407992 161417112 + Epb41l1 protein_coding processed_transcript MGP_129S1SvImJ_T0058775.1 MGP_129S1SvImJ_G0026764.1 mouse_genomes_project 2 161436672 161443129 + Epb41l1 protein_coding retained_intron MGP_129S1SvImJ_T0058776.1 MGP_129S1SvImJ_G0026764.1 mouse_genomes_project 2 161440524 161443470 + Epb41l1 protein_coding processed_transcript MGP_129S1SvImJ_T0056597.1 MGP_129S1SvImJ_G0026240.1 mouse_genomes_project 2 112013776 112067064 + MGP_129S1SvImJ_P0056597 Bdnf protein_coding protein_coding MGP_129S1SvImJ_T0056598.1 MGP_129S1SvImJ_G0026240.1 mouse_genomes_project 2 112014973 112067064 + MGP_129S1SvImJ_P0056598 Bdnf protein_coding protein_coding MGP_129S1SvImJ_T0056599.1 MGP_129S1SvImJ_G0026240.1 mouse_genomes_project 2 112014973 112067064 + MGP_129S1SvImJ_P0056599 Bdnf protein_coding protein_coding MGP_129S1SvImJ_T0056600.1 MGP_129S1SvImJ_G0026240.1 mouse_genomes_project 2 112014973 112067064 + MGP_129S1SvImJ_P0056600 Bdnf protein_coding protein_coding MGP_129S1SvImJ_T0056601.1 MGP_129S1SvImJ_G0026240.1 mouse_genomes_project 2 112016108 112067064 + MGP_129S1SvImJ_P0056601 Bdnf protein_coding protein_coding MGP_129S1SvImJ_T0056602.1 MGP_129S1SvImJ_G0026240.1 mouse_genomes_project 2 112031519 112067064 + MGP_129S1SvImJ_P0056602 Bdnf protein_coding protein_coding MGP_129S1SvImJ_T0056603.1 MGP_129S1SvImJ_G0026240.1 mouse_genomes_project 2 112032110 112067064 + MGP_129S1SvImJ_P0056603 Bdnf protein_coding protein_coding MGP_129S1SvImJ_T0056604.1 MGP_129S1SvImJ_G0026240.1 mouse_genomes_project 2 112032626 112067064 + MGP_129S1SvImJ_P0056604 Bdnf protein_coding protein_coding MGP_129S1SvImJ_T0056605.1 MGP_129S1SvImJ_G0026240.1 mouse_genomes_project 2 112033472 112067064 + MGP_129S1SvImJ_P0056605 Bdnf protein_coding protein_coding MGP_129S1SvImJ_T0056606.1 MGP_129S1SvImJ_G0026240.1 mouse_genomes_project 2 112033532 112067064 + MGP_129S1SvImJ_P0056606 Bdnf protein_coding protein_coding MGP_129S1SvImJ_T0056607.1 MGP_129S1SvImJ_G0026240.1 mouse_genomes_project 2 112049490 112067064 + MGP_129S1SvImJ_P0056607 Bdnf protein_coding protein_coding MGP_129S1SvImJ_T0055362.1 MGP_129S1SvImJ_G0025842.1 mouse_genomes_project 2 74213412 74216292 - MGP_129S1SvImJ_P0055362 Atp5g3 protein_coding protein_coding MGP_129S1SvImJ_T0055363.1 MGP_129S1SvImJ_G0025842.1 mouse_genomes_project 2 74213412 74216291 - MGP_129S1SvImJ_P0055363 Atp5g3 protein_coding protein_coding MGP_129S1SvImJ_T0055364.1 MGP_129S1SvImJ_G0025842.1 mouse_genomes_project 2 74213696 74216248 - Atp5g3 protein_coding processed_transcript MGP_129S1SvImJ_T0055365.1 MGP_129S1SvImJ_G0025842.1 mouse_genomes_project 2 74214148 74215425 - Atp5g3 protein_coding processed_transcript MGP_129S1SvImJ_T0055366.1 MGP_129S1SvImJ_G0025842.1 mouse_genomes_project 2 74214283 74216257 - Atp5g3 protein_coding processed_transcript MGP_129S1SvImJ_T0007153.1 MGP_129S1SvImJ_G0005872.1 mouse_genomes_project 2 16522617 16525191 - Carlr lincRNA lincRNA MGP_129S1SvImJ_T0056660.1 MGP_129S1SvImJ_G0026275.1 mouse_genomes_project 2 114392838 114393801 - MGP_129S1SvImJ_P0056660 Olfr1308 protein_coding protein_coding MGP_129S1SvImJ_T0059543.1 MGP_129S1SvImJ_G0026949.1 mouse_genomes_project 2 179105848 179178175 - MGP_129S1SvImJ_P0059543 Bmp7 protein_coding protein_coding MGP_129S1SvImJ_T0059544.1 MGP_129S1SvImJ_G0026949.1 mouse_genomes_project 2 179154127 179177946 - Bmp7 protein_coding retained_intron MGP_129S1SvImJ_T0056520.1 MGP_129S1SvImJ_G0026225.1 mouse_genomes_project 2 107139520 107148919 - Eif3m protein_coding retained_intron MGP_129S1SvImJ_T0056521.1 MGP_129S1SvImJ_G0026225.1 mouse_genomes_project 2 107139520 107158730 - MGP_129S1SvImJ_P0056521 Eif3m protein_coding protein_coding MGP_129S1SvImJ_T0056522.1 MGP_129S1SvImJ_G0026225.1 mouse_genomes_project 2 107139523 107148471 - MGP_129S1SvImJ_P0056522 Eif3m protein_coding protein_coding MGP_129S1SvImJ_T0056523.1 MGP_129S1SvImJ_G0026225.1 mouse_genomes_project 2 107139553 107158693 - MGP_129S1SvImJ_P0056523 Eif3m protein_coding protein_coding MGP_129S1SvImJ_T0003992.1 MGP_129S1SvImJ_G0003562.1 mouse_genomes_project 2 51712090 51714427 + antisense antisense MGP_129S1SvImJ_T0056643.1 MGP_129S1SvImJ_G0026258.1 mouse_genomes_project 2 113736077 113737131 + MGP_129S1SvImJ_P0056643 Olfr1281 protein_coding protein_coding MGP_129S1SvImJ_T0055605.1 MGP_129S1SvImJ_G0025899.1 mouse_genomes_project 2 85110602 85153430 - MGP_129S1SvImJ_P0055605 Tfpi protein_coding protein_coding MGP_129S1SvImJ_T0055606.1 MGP_129S1SvImJ_G0025899.1 mouse_genomes_project 2 85110602 85154926 - MGP_129S1SvImJ_P0055606 Tfpi protein_coding protein_coding MGP_129S1SvImJ_T0055607.1 MGP_129S1SvImJ_G0025899.1 mouse_genomes_project 2 85110607 85112343 - Tfpi protein_coding processed_transcript MGP_129S1SvImJ_T0055608.1 MGP_129S1SvImJ_G0025899.1 mouse_genomes_project 2 85110607 85153820 - MGP_129S1SvImJ_P0055608 Tfpi protein_coding protein_coding MGP_129S1SvImJ_T0055609.1 MGP_129S1SvImJ_G0025899.1 mouse_genomes_project 2 85117887 85157771 - MGP_129S1SvImJ_P0055609 Tfpi protein_coding protein_coding MGP_129S1SvImJ_T0055610.1 MGP_129S1SvImJ_G0025899.1 mouse_genomes_project 2 85117887 85157783 - MGP_129S1SvImJ_P0055610 Tfpi protein_coding protein_coding MGP_129S1SvImJ_T0055611.1 MGP_129S1SvImJ_G0025899.1 mouse_genomes_project 2 85117887 85157756 - MGP_129S1SvImJ_P0055611 Tfpi protein_coding protein_coding MGP_129S1SvImJ_T0055612.1 MGP_129S1SvImJ_G0025899.1 mouse_genomes_project 2 85117887 85135761 - MGP_129S1SvImJ_P0055612 Tfpi protein_coding protein_coding MGP_129S1SvImJ_T0055613.1 MGP_129S1SvImJ_G0025899.1 mouse_genomes_project 2 85118470 85153449 - MGP_129S1SvImJ_P0055613 Tfpi protein_coding protein_coding MGP_129S1SvImJ_T0055614.1 MGP_129S1SvImJ_G0025899.1 mouse_genomes_project 2 85121816 85153445 - Tfpi protein_coding processed_transcript MGP_129S1SvImJ_T0099704.1 MGP_129S1SvImJ_G0037771.1 mouse_genomes_project 2 143481608 143481712 + Gm27385 snRNA snRNA MGP_129S1SvImJ_T0101003.1 MGP_129S1SvImJ_G0039070.1 mouse_genomes_project 2 174807758 174807887 - Gm25214 snoRNA snoRNA MGP_129S1SvImJ_T0058864.1 MGP_129S1SvImJ_G0026781.1 mouse_genomes_project 2 162364629 162395704 + MGP_129S1SvImJ_P0058864 Manbal protein_coding protein_coding MGP_129S1SvImJ_T0055911.1 MGP_129S1SvImJ_G0026099.1 mouse_genomes_project 2 90693444 90694497 - MGP_129S1SvImJ_P0055911 Olfr1242 protein_coding protein_coding MGP_129S1SvImJ_T0055912.1 MGP_129S1SvImJ_G0026099.1 mouse_genomes_project 2 90693540 90698364 - MGP_129S1SvImJ_P0055912 Olfr1242 protein_coding protein_coding MGP_129S1SvImJ_T0055913.1 MGP_129S1SvImJ_G0026099.1 mouse_genomes_project 2 90694170 90697854 - Olfr1242 protein_coding processed_transcript MGP_129S1SvImJ_T0054689.1 MGP_129S1SvImJ_G0025720.1 mouse_genomes_project 2 48044716 48092316 - MGP_129S1SvImJ_P0054689 Orc4 protein_coding protein_coding MGP_129S1SvImJ_T0054690.1 MGP_129S1SvImJ_G0025720.1 mouse_genomes_project 2 48046772 48051267 - Orc4 protein_coding processed_transcript MGP_129S1SvImJ_T0054691.1 MGP_129S1SvImJ_G0025720.1 mouse_genomes_project 2 48047208 48092271 - Orc4 protein_coding processed_transcript MGP_129S1SvImJ_T0054692.1 MGP_129S1SvImJ_G0025720.1 mouse_genomes_project 2 48047271 48051922 - Orc4 protein_coding processed_transcript MGP_129S1SvImJ_T0054693.1 MGP_129S1SvImJ_G0025720.1 mouse_genomes_project 2 48047306 48053829 - Orc4 protein_coding processed_transcript MGP_129S1SvImJ_T0054694.1 MGP_129S1SvImJ_G0025720.1 mouse_genomes_project 2 48052657 48092274 - Orc4 protein_coding processed_transcript MGP_129S1SvImJ_T0054695.1 MGP_129S1SvImJ_G0025720.1 mouse_genomes_project 2 48058458 48093085 - MGP_129S1SvImJ_P0054695 Orc4 protein_coding protein_coding MGP_129S1SvImJ_T0054696.1 MGP_129S1SvImJ_G0025720.1 mouse_genomes_project 2 48071507 48083419 - Orc4 protein_coding processed_transcript MGP_129S1SvImJ_T0054697.1 MGP_129S1SvImJ_G0025720.1 mouse_genomes_project 2 48073839 48092274 - MGP_129S1SvImJ_P0054697 Orc4 protein_coding protein_coding MGP_129S1SvImJ_T0054698.1 MGP_129S1SvImJ_G0025720.1 mouse_genomes_project 2 48075034 48076701 - Orc4 protein_coding processed_transcript MGP_129S1SvImJ_T0054699.1 MGP_129S1SvImJ_G0025720.1 mouse_genomes_project 2 48079531 48092272 - Orc4 protein_coding processed_transcript MGP_129S1SvImJ_T0054700.1 MGP_129S1SvImJ_G0025720.1 mouse_genomes_project 2 48079827 48092281 - MGP_129S1SvImJ_P0054700 Orc4 protein_coding protein_coding MGP_129S1SvImJ_T0054701.1 MGP_129S1SvImJ_G0025720.1 mouse_genomes_project 2 48079898 48093321 - MGP_129S1SvImJ_P0054701 Orc4 protein_coding protein_coding MGP_129S1SvImJ_T0059014.1 MGP_129S1SvImJ_G0026812.1 mouse_genomes_project 2 168197046 168197691 - MGP_129S1SvImJ_P0059014 Cisd3 protein_coding protein_coding MGP_129S1SvImJ_T0056111.1 MGP_129S1SvImJ_G0026148.1 mouse_genomes_project 2 92585834 92599446 + MGP_129S1SvImJ_P0056111 Arfgap2 protein_coding protein_coding MGP_129S1SvImJ_T0056112.1 MGP_129S1SvImJ_G0026148.1 mouse_genomes_project 2 92586153 92599446 + MGP_129S1SvImJ_P0056112 Arfgap2 protein_coding protein_coding MGP_129S1SvImJ_T0056113.1 MGP_129S1SvImJ_G0026148.1 mouse_genomes_project 2 92586184 92587406 + Arfgap2 protein_coding retained_intron MGP_129S1SvImJ_T0056114.1 MGP_129S1SvImJ_G0026148.1 mouse_genomes_project 2 92586194 92589613 + Arfgap2 protein_coding retained_intron MGP_129S1SvImJ_T0056115.1 MGP_129S1SvImJ_G0026148.1 mouse_genomes_project 2 92586562 92588250 + Arfgap2 protein_coding processed_transcript MGP_129S1SvImJ_T0056116.1 MGP_129S1SvImJ_G0026148.1 mouse_genomes_project 2 92590202 92594453 + Arfgap2 protein_coding retained_intron MGP_129S1SvImJ_T0056117.1 MGP_129S1SvImJ_G0026148.1 mouse_genomes_project 2 92590952 92594971 + Arfgap2 protein_coding retained_intron MGP_129S1SvImJ_T0013526.1 MGP_129S1SvImJ_G0011615.1 mouse_genomes_project 2 43832058 43834745 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057694.1 MGP_129S1SvImJ_G0026512.1 mouse_genomes_project 2 134104242 134109479 - MGP_129S1SvImJ_P0057694 Lzts3 protein_coding protein_coding MGP_129S1SvImJ_T0057695.1 MGP_129S1SvImJ_G0026512.1 mouse_genomes_project 2 134104242 134109479 - MGP_129S1SvImJ_P0057695 Lzts3 protein_coding protein_coding MGP_129S1SvImJ_T0057696.1 MGP_129S1SvImJ_G0026512.1 mouse_genomes_project 2 134104245 134115853 - MGP_129S1SvImJ_P0057696 Lzts3 protein_coding protein_coding MGP_129S1SvImJ_T0058130.1 MGP_129S1SvImJ_G0026605.1 mouse_genomes_project 2 152358344 152361416 - MGP_129S1SvImJ_P0058130 Foxa2 protein_coding protein_coding MGP_129S1SvImJ_T0058131.1 MGP_129S1SvImJ_G0026605.1 mouse_genomes_project 2 152358344 152362437 - MGP_129S1SvImJ_P0058131 Foxa2 protein_coding protein_coding MGP_129S1SvImJ_T0058132.1 MGP_129S1SvImJ_G0026605.1 mouse_genomes_project 2 152359009 152362364 - MGP_129S1SvImJ_P0058132 Foxa2 protein_coding protein_coding MGP_129S1SvImJ_T0058133.1 MGP_129S1SvImJ_G0026605.1 mouse_genomes_project 2 152359707 152360932 - Foxa2 protein_coding processed_transcript MGP_129S1SvImJ_T0098566.1 MGP_129S1SvImJ_G0036651.1 mouse_genomes_project 2 114920893 114921007 - n-R5s202 rRNA rRNA MGP_129S1SvImJ_T0100998.1 MGP_129S1SvImJ_G0039065.1 mouse_genomes_project 2 170818192 170818323 - Gm25569 snoRNA snoRNA MGP_129S1SvImJ_T0058609.1 MGP_129S1SvImJ_G0026744.1 mouse_genomes_project 2 160666432 160668136 - MGP_129S1SvImJ_P0058609 BC029722 protein_coding protein_coding MGP_129S1SvImJ_T0010485.1 MGP_129S1SvImJ_G0008601.1 mouse_genomes_project 2 160458779 160458858 + Mir499 miRNA miRNA MGP_129S1SvImJ_T0057785.1 MGP_129S1SvImJ_G0026528.1 mouse_genomes_project 2 134750089 134763987 + MGP_129S1SvImJ_P0057785 Mavs protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057786.1 MGP_129S1SvImJ_G0026528.1 mouse_genomes_project 2 134750093 134763990 + MGP_129S1SvImJ_P0057786 Mavs protein_coding protein_coding MGP_129S1SvImJ_T0057787.1 MGP_129S1SvImJ_G0026528.1 mouse_genomes_project 2 134750131 134763990 + MGP_129S1SvImJ_P0057787 Mavs protein_coding protein_coding MGP_129S1SvImJ_T0057788.1 MGP_129S1SvImJ_G0026528.1 mouse_genomes_project 2 134757903 134761630 + Mavs protein_coding processed_transcript MGP_129S1SvImJ_T0054588.1 MGP_129S1SvImJ_G0025707.1 mouse_genomes_project 2 37792772 37801447 + MGP_129S1SvImJ_P0054588 Wdr38 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054589.1 MGP_129S1SvImJ_G0025707.1 mouse_genomes_project 2 37793615 37796879 + MGP_129S1SvImJ_P0054589 Wdr38 protein_coding protein_coding MGP_129S1SvImJ_T0054590.1 MGP_129S1SvImJ_G0025707.1 mouse_genomes_project 2 37793628 37795571 + Wdr38 protein_coding processed_transcript MGP_129S1SvImJ_T0055005.1 MGP_129S1SvImJ_G0025775.1 mouse_genomes_project 2 63701438 63833877 - MGP_129S1SvImJ_P0055005 Fign protein_coding protein_coding MGP_129S1SvImJ_T0055006.1 MGP_129S1SvImJ_G0025775.1 mouse_genomes_project 2 63707262 63833903 - MGP_129S1SvImJ_P0055006 Fign protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055007.1 MGP_129S1SvImJ_G0025775.1 mouse_genomes_project 2 63710371 63833853 - Fign protein_coding processed_transcript MGP_129S1SvImJ_T0055008.1 MGP_129S1SvImJ_G0025775.1 mouse_genomes_project 2 63710540 63833875 - Fign protein_coding processed_transcript MGP_129S1SvImJ_T0010352.1 MGP_129S1SvImJ_G0008468.1 mouse_genomes_project 2 7823281 7823375 + Mir466f-1 miRNA miRNA MGP_129S1SvImJ_T0053612.1 MGP_129S1SvImJ_G0025537.1 mouse_genomes_project 2 27235104 27241898 + MGP_129S1SvImJ_P0053612 Setx protein_coding protein_coding MGP_129S1SvImJ_T0053613.1 MGP_129S1SvImJ_G0025537.1 mouse_genomes_project 2 27235915 27300398 + MGP_129S1SvImJ_P0053613 Setx protein_coding protein_coding MGP_129S1SvImJ_T0053614.1 MGP_129S1SvImJ_G0025537.1 mouse_genomes_project 2 27236809 27242102 + Setx protein_coding retained_intron MGP_129S1SvImJ_T0053615.1 MGP_129S1SvImJ_G0025537.1 mouse_genomes_project 2 27269921 27275455 + Setx protein_coding processed_transcript MGP_129S1SvImJ_T0053616.1 MGP_129S1SvImJ_G0025537.1 mouse_genomes_project 2 27277150 27295140 + MGP_129S1SvImJ_P0053616 Setx protein_coding protein_coding MGP_129S1SvImJ_T0003972.1 MGP_129S1SvImJ_G0003547.1 mouse_genomes_project 2 31688648 31694550 + Gm13528 antisense antisense MGP_129S1SvImJ_T0007383.1 MGP_129S1SvImJ_G0006056.1 mouse_genomes_project 2 165170994 165196075 + 9130015L21Rik lincRNA lincRNA MGP_129S1SvImJ_T0058409.1 MGP_129S1SvImJ_G0026694.1 mouse_genomes_project 2 158153348 158154407 + MGP_129S1SvImJ_P0058409 4930404H24Rik protein_coding protein_coding MGP_129S1SvImJ_T0057887.1 MGP_129S1SvImJ_G0026550.1 mouse_genomes_project 2 136536818 136584979 - Fermt1 protein_coding retained_intron MGP_129S1SvImJ_T0057888.1 MGP_129S1SvImJ_G0026550.1 mouse_genomes_project 2 136536835 136584391 - MGP_129S1SvImJ_P0057888 Fermt1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0057889.1 MGP_129S1SvImJ_G0026550.1 mouse_genomes_project 2 136574753 136580727 - Fermt1 protein_coding processed_transcript MGP_129S1SvImJ_T0057890.1 MGP_129S1SvImJ_G0026550.1 mouse_genomes_project 2 136577740 136580593 - Fermt1 protein_coding processed_transcript MGP_129S1SvImJ_T0013833.1 MGP_129S1SvImJ_G0011922.1 mouse_genomes_project 2 155446307 155447090 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099668.1 MGP_129S1SvImJ_G0037735.1 mouse_genomes_project 2 35958033 35958140 + Gm22306 snRNA snRNA MGP_129S1SvImJ_T0058316.1 MGP_129S1SvImJ_G0026669.1 mouse_genomes_project 2 157139556 157143627 - MGP_129S1SvImJ_P0058316 Defb19 protein_coding protein_coding MGP_129S1SvImJ_T0013532.1 MGP_129S1SvImJ_G0011621.1 mouse_genomes_project 2 47447886 47448139 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010378.1 MGP_129S1SvImJ_G0008494.1 mouse_genomes_project 2 7874443 7874541 + Mir669m-2 miRNA miRNA MGP_129S1SvImJ_T0054490.1 MGP_129S1SvImJ_G0025674.1 mouse_genomes_project 2 35472822 35473761 + MGP_129S1SvImJ_P0054490 Olfr50 protein_coding protein_coding MGP_129S1SvImJ_T0102379.1 MGP_129S1SvImJ_G0040213.1 mouse_genomes_project 2 20295549 20296218 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0053590.1 MGP_129S1SvImJ_G0025532.1 mouse_genomes_project 2 26908053 26926111 - MGP_129S1SvImJ_P0053590 Gtf3c4 protein_coding protein_coding MGP_129S1SvImJ_T0053591.1 MGP_129S1SvImJ_G0025532.1 mouse_genomes_project 2 26908059 26926037 - MGP_129S1SvImJ_P0053591 Gtf3c4 protein_coding protein_coding MGP_129S1SvImJ_T0053592.1 MGP_129S1SvImJ_G0025532.1 mouse_genomes_project 2 26920954 26926037 - Gtf3c4 protein_coding processed_transcript MGP_129S1SvImJ_T0053593.1 MGP_129S1SvImJ_G0025532.1 mouse_genomes_project 2 26921054 26926103 - Gtf3c4 protein_coding processed_transcript MGP_129S1SvImJ_T0058674.1 MGP_129S1SvImJ_G0026754.1 mouse_genomes_project 2 160922840 160927172 + Spag4 protein_coding retained_intron MGP_129S1SvImJ_T0058675.1 MGP_129S1SvImJ_G0026754.1 mouse_genomes_project 2 160922863 160928302 + Spag4 protein_coding retained_intron MGP_129S1SvImJ_T0058676.1 MGP_129S1SvImJ_G0026754.1 mouse_genomes_project 2 160922892 160926895 + Spag4 protein_coding retained_intron MGP_129S1SvImJ_T0058677.1 MGP_129S1SvImJ_G0026754.1 mouse_genomes_project 2 160922909 160927172 + MGP_129S1SvImJ_P0058677 Spag4 protein_coding protein_coding MGP_129S1SvImJ_T0058678.1 MGP_129S1SvImJ_G0026754.1 mouse_genomes_project 2 160923102 160924996 + MGP_129S1SvImJ_P0058678 Spag4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058679.1 MGP_129S1SvImJ_G0026754.1 mouse_genomes_project 2 160923218 160925203 + MGP_129S1SvImJ_P0058679 Spag4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058680.1 MGP_129S1SvImJ_G0026754.1 mouse_genomes_project 2 160923407 160925711 + MGP_129S1SvImJ_P0058680 Spag4 protein_coding protein_coding MGP_129S1SvImJ_T0058681.1 MGP_129S1SvImJ_G0026754.1 mouse_genomes_project 2 160924401 160927049 + Spag4 protein_coding processed_transcript MGP_129S1SvImJ_T0053020.1 MGP_129S1SvImJ_G0025421.1 mouse_genomes_project 2 23039770 23042352 + MGP_129S1SvImJ_P0053020 Nrarp protein_coding protein_coding MGP_129S1SvImJ_T0059444.1 MGP_129S1SvImJ_G0026921.1 mouse_genomes_project 2 173895766 173922302 + MGP_129S1SvImJ_P0059444 Pard6b protein_coding protein_coding MGP_129S1SvImJ_T0053608.1 MGP_129S1SvImJ_G0025536.1 mouse_genomes_project 2 27159900 27192328 + MGP_129S1SvImJ_P0053608 Ttf1 protein_coding protein_coding MGP_129S1SvImJ_T0053609.1 MGP_129S1SvImJ_G0025536.1 mouse_genomes_project 2 27159904 27192288 + Ttf1 protein_coding retained_intron MGP_129S1SvImJ_T0053610.1 MGP_129S1SvImJ_G0025536.1 mouse_genomes_project 2 27175372 27183597 + Ttf1 protein_coding retained_intron MGP_129S1SvImJ_T0053611.1 MGP_129S1SvImJ_G0025536.1 mouse_genomes_project 2 27185408 27187958 + Ttf1 protein_coding retained_intron MGP_129S1SvImJ_T0010497.1 MGP_129S1SvImJ_G0008613.1 mouse_genomes_project 2 174497629 174497693 - Mir7004 miRNA miRNA MGP_129S1SvImJ_T0003923.1 MGP_129S1SvImJ_G0003508.1 mouse_genomes_project 2 12267265 12295030 - Gm13269 antisense antisense MGP_129S1SvImJ_T0003924.1 MGP_129S1SvImJ_G0003508.1 mouse_genomes_project 2 12267265 12291485 - Gm13269 antisense antisense MGP_129S1SvImJ_T0017843.1 MGP_129S1SvImJ_G0015445.1 mouse_genomes_project 2 94330140 94389190 - Gm13791 processed_transcript processed_transcript MGP_129S1SvImJ_T0053666.1 MGP_129S1SvImJ_G0025545.1 mouse_genomes_project 2 27991715 28014972 + Urm1 protein_coding processed_transcript MGP_129S1SvImJ_T0053667.1 MGP_129S1SvImJ_G0025545.1 mouse_genomes_project 2 27998871 28015201 + Urm1 protein_coding processed_transcript MGP_129S1SvImJ_T0053668.1 MGP_129S1SvImJ_G0025545.1 mouse_genomes_project 2 27998871 28016829 + MGP_129S1SvImJ_P0053668 Urm1 protein_coding protein_coding MGP_129S1SvImJ_T0053669.1 MGP_129S1SvImJ_G0025545.1 mouse_genomes_project 2 27998890 28015248 + Urm1 protein_coding processed_transcript MGP_129S1SvImJ_T0053670.1 MGP_129S1SvImJ_G0025545.1 mouse_genomes_project 2 27998924 28005148 + Urm1 protein_coding retained_intron MGP_129S1SvImJ_T0053671.1 MGP_129S1SvImJ_G0025545.1 mouse_genomes_project 2 28013474 28015891 + Urm1 protein_coding retained_intron MGP_129S1SvImJ_T0055744.1 MGP_129S1SvImJ_G0025952.1 mouse_genomes_project 2 86861462 86862119 - MGP_129S1SvImJ_P0055744 protein_coding protein_coding MGP_129S1SvImJ_T0010488.1 MGP_129S1SvImJ_G0008604.1 mouse_genomes_project 2 163726918 163726976 + Mir3474 miRNA miRNA MGP_129S1SvImJ_T0058965.1 MGP_129S1SvImJ_G0026804.1 mouse_genomes_project 2 165754449 165812671 - MGP_129S1SvImJ_P0058965 protein_coding protein_coding MGP_129S1SvImJ_T0058799.1 MGP_129S1SvImJ_G0026768.1 mouse_genomes_project 2 161777869 161793400 + MGP_129S1SvImJ_P0058799 Tgif2 protein_coding protein_coding MGP_129S1SvImJ_T0058800.1 MGP_129S1SvImJ_G0026768.1 mouse_genomes_project 2 161777962 161793400 + MGP_129S1SvImJ_P0058800 Tgif2 protein_coding protein_coding MGP_129S1SvImJ_T0058801.1 MGP_129S1SvImJ_G0026768.1 mouse_genomes_project 2 161778870 161785514 + MGP_129S1SvImJ_P0058801 Tgif2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058802.1 MGP_129S1SvImJ_G0026768.1 mouse_genomes_project 2 161787793 161791025 + Tgif2 protein_coding processed_transcript MGP_129S1SvImJ_T0058803.1 MGP_129S1SvImJ_G0026768.1 mouse_genomes_project 2 161788673 161791379 + Tgif2 protein_coding processed_transcript MGP_129S1SvImJ_T0013644.1 MGP_129S1SvImJ_G0011733.1 mouse_genomes_project 2 84191241 84191382 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053819.1 MGP_129S1SvImJ_G0025566.1 mouse_genomes_project 2 28589619 28610731 + MGP_129S1SvImJ_P0053819 Fam73b protein_coding protein_coding MGP_129S1SvImJ_T0053820.1 MGP_129S1SvImJ_G0025566.1 mouse_genomes_project 2 28589631 28594096 + Fam73b protein_coding processed_transcript MGP_129S1SvImJ_T0053821.1 MGP_129S1SvImJ_G0025566.1 mouse_genomes_project 2 28589640 28604311 + MGP_129S1SvImJ_P0053821 Fam73b protein_coding protein_coding MGP_129S1SvImJ_T0053822.1 MGP_129S1SvImJ_G0025566.1 mouse_genomes_project 2 28589652 28594703 + Fam73b protein_coding retained_intron MGP_129S1SvImJ_T0053823.1 MGP_129S1SvImJ_G0025566.1 mouse_genomes_project 2 28589679 28595804 + MGP_129S1SvImJ_P0053823 Fam73b protein_coding protein_coding MGP_129S1SvImJ_T0053824.1 MGP_129S1SvImJ_G0025566.1 mouse_genomes_project 2 28589682 28610729 + MGP_129S1SvImJ_P0053824 Fam73b protein_coding protein_coding MGP_129S1SvImJ_T0053825.1 MGP_129S1SvImJ_G0025566.1 mouse_genomes_project 2 28593081 28594704 + Fam73b protein_coding retained_intron MGP_129S1SvImJ_T0053826.1 MGP_129S1SvImJ_G0025566.1 mouse_genomes_project 2 28593813 28596601 + MGP_129S1SvImJ_P0053826 Fam73b protein_coding protein_coding MGP_129S1SvImJ_T0053827.1 MGP_129S1SvImJ_G0025566.1 mouse_genomes_project 2 28596680 28601876 + Fam73b protein_coding retained_intron MGP_129S1SvImJ_T0053828.1 MGP_129S1SvImJ_G0025566.1 mouse_genomes_project 2 28603451 28607217 + Fam73b protein_coding retained_intron MGP_129S1SvImJ_T0053829.1 MGP_129S1SvImJ_G0025566.1 mouse_genomes_project 2 28606922 28609310 + MGP_129S1SvImJ_P0053829 Fam73b protein_coding protein_coding MGP_129S1SvImJ_T0053830.1 MGP_129S1SvImJ_G0025566.1 mouse_genomes_project 2 28607153 28609416 + MGP_129S1SvImJ_P0053830 Fam73b protein_coding protein_coding MGP_129S1SvImJ_T0058255.1 MGP_129S1SvImJ_G0026643.1 mouse_genomes_project 2 156131640 156157766 - MGP_129S1SvImJ_P0058255 Rad21l protein_coding protein_coding MGP_129S1SvImJ_T0058256.1 MGP_129S1SvImJ_G0026643.1 mouse_genomes_project 2 156131640 156157766 - MGP_129S1SvImJ_P0058256 Rad21l protein_coding protein_coding MGP_129S1SvImJ_T0013563.1 MGP_129S1SvImJ_G0011652.1 mouse_genomes_project 2 57154808 57154985 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013877.1 MGP_129S1SvImJ_G0011966.1 mouse_genomes_project 2 171570163 171570725 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053219.1 MGP_129S1SvImJ_G0025458.1 mouse_genomes_project 2 23485825 23517500 - MGP_129S1SvImJ_P0053219 Rabl6 protein_coding protein_coding MGP_129S1SvImJ_T0053220.1 MGP_129S1SvImJ_G0025458.1 mouse_genomes_project 2 23486918 23494277 - Rabl6 protein_coding processed_transcript MGP_129S1SvImJ_T0053221.1 MGP_129S1SvImJ_G0025458.1 mouse_genomes_project 2 23486918 23517444 - Rabl6 protein_coding processed_transcript MGP_129S1SvImJ_T0053222.1 MGP_129S1SvImJ_G0025458.1 mouse_genomes_project 2 23486942 23487868 - Rabl6 protein_coding processed_transcript MGP_129S1SvImJ_T0053223.1 MGP_129S1SvImJ_G0025458.1 mouse_genomes_project 2 23487996 23488631 - Rabl6 protein_coding processed_transcript MGP_129S1SvImJ_T0053224.1 MGP_129S1SvImJ_G0025458.1 mouse_genomes_project 2 23488481 23491212 - Rabl6 protein_coding processed_transcript MGP_129S1SvImJ_T0053225.1 MGP_129S1SvImJ_G0025458.1 mouse_genomes_project 2 23491349 23493064 - Rabl6 protein_coding processed_transcript MGP_129S1SvImJ_T0053226.1 MGP_129S1SvImJ_G0025458.1 mouse_genomes_project 2 23491431 23517464 - Rabl6 protein_coding processed_transcript MGP_129S1SvImJ_T0053227.1 MGP_129S1SvImJ_G0025458.1 mouse_genomes_project 2 23502520 23517435 - Rabl6 protein_coding processed_transcript MGP_129S1SvImJ_T0013548.1 MGP_129S1SvImJ_G0011637.1 mouse_genomes_project 2 51897655 51897938 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059827.1 MGP_129S1SvImJ_G0027017.1 mouse_genomes_project 2 187828671 187869017 - MGP_129S1SvImJ_P0059827 Gmeb2 protein_coding protein_coding MGP_129S1SvImJ_T0059828.1 MGP_129S1SvImJ_G0027017.1 mouse_genomes_project 2 187831007 187857235 - MGP_129S1SvImJ_P0059828 Gmeb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059829.1 MGP_129S1SvImJ_G0027017.1 mouse_genomes_project 2 187831997 187833354 - Gmeb2 protein_coding retained_intron MGP_129S1SvImJ_T0059830.1 MGP_129S1SvImJ_G0027017.1 mouse_genomes_project 2 187833140 187868157 - MGP_129S1SvImJ_P0059830 Gmeb2 protein_coding protein_coding MGP_129S1SvImJ_T0059831.1 MGP_129S1SvImJ_G0027017.1 mouse_genomes_project 2 187833160 187868998 - MGP_129S1SvImJ_P0059831 Gmeb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059832.1 MGP_129S1SvImJ_G0027017.1 mouse_genomes_project 2 187842814 187869013 - Gmeb2 protein_coding retained_intron MGP_129S1SvImJ_T0013572.1 MGP_129S1SvImJ_G0011661.1 mouse_genomes_project 2 59671766 59672075 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057368.1 MGP_129S1SvImJ_G0026430.1 mouse_genomes_project 2 128755003 128825902 - MGP_129S1SvImJ_P0057368 Cep152 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0057369.1 MGP_129S1SvImJ_G0026430.1 mouse_genomes_project 2 128755008 128826042 - MGP_129S1SvImJ_P0057369 Cep152 protein_coding protein_coding MGP_129S1SvImJ_T0055997.1 MGP_129S1SvImJ_G0026135.1 mouse_genomes_project 2 92181599 92185428 - Ndufs3 protein_coding processed_transcript MGP_129S1SvImJ_T0055998.1 MGP_129S1SvImJ_G0026135.1 mouse_genomes_project 2 92181601 92191753 - MGP_129S1SvImJ_P0055998 Ndufs3 protein_coding protein_coding MGP_129S1SvImJ_T0055999.1 MGP_129S1SvImJ_G0026135.1 mouse_genomes_project 2 92181603 92189612 - Ndufs3 protein_coding processed_transcript MGP_129S1SvImJ_T0056000.1 MGP_129S1SvImJ_G0026135.1 mouse_genomes_project 2 92181715 92185912 - Ndufs3 protein_coding processed_transcript MGP_129S1SvImJ_T0056001.1 MGP_129S1SvImJ_G0026135.1 mouse_genomes_project 2 92185269 92191568 - Ndufs3 protein_coding processed_transcript MGP_129S1SvImJ_T0056002.1 MGP_129S1SvImJ_G0026135.1 mouse_genomes_project 2 92190750 92191628 - Ndufs3 protein_coding processed_transcript MGP_129S1SvImJ_T0004151.1 MGP_129S1SvImJ_G0003672.1 mouse_genomes_project 2 160379483 160389397 - Acss2os antisense antisense MGP_129S1SvImJ_T0013782.1 MGP_129S1SvImJ_G0011871.1 mouse_genomes_project 2 136270209 136270664 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057175.1 MGP_129S1SvImJ_G0026387.1 mouse_genomes_project 2 124196614 124243888 - MGP_129S1SvImJ_P0057175 Ppip5k1 protein_coding protein_coding MGP_129S1SvImJ_T0057176.1 MGP_129S1SvImJ_G0026387.1 mouse_genomes_project 2 124196614 124239556 - MGP_129S1SvImJ_P0057176 Ppip5k1 protein_coding protein_coding MGP_129S1SvImJ_T0057177.1 MGP_129S1SvImJ_G0026387.1 mouse_genomes_project 2 124196614 124243891 - MGP_129S1SvImJ_P0057177 Ppip5k1 protein_coding protein_coding MGP_129S1SvImJ_T0057178.1 MGP_129S1SvImJ_G0026387.1 mouse_genomes_project 2 124196942 124239524 - MGP_129S1SvImJ_P0057178 Ppip5k1 protein_coding protein_coding MGP_129S1SvImJ_T0057179.1 MGP_129S1SvImJ_G0026387.1 mouse_genomes_project 2 124196948 124243954 - MGP_129S1SvImJ_P0057179 Ppip5k1 protein_coding protein_coding MGP_129S1SvImJ_T0057180.1 MGP_129S1SvImJ_G0026387.1 mouse_genomes_project 2 124207646 124224140 - MGP_129S1SvImJ_P0057180 Ppip5k1 protein_coding protein_coding MGP_129S1SvImJ_T0057181.1 MGP_129S1SvImJ_G0026387.1 mouse_genomes_project 2 124207681 124221718 - MGP_129S1SvImJ_P0057181 Ppip5k1 protein_coding protein_coding MGP_129S1SvImJ_T0057182.1 MGP_129S1SvImJ_G0026387.1 mouse_genomes_project 2 124207759 124223710 - MGP_129S1SvImJ_P0057182 Ppip5k1 protein_coding protein_coding MGP_129S1SvImJ_T0057183.1 MGP_129S1SvImJ_G0026387.1 mouse_genomes_project 2 124213626 124224136 - MGP_129S1SvImJ_P0057183 Ppip5k1 protein_coding protein_coding MGP_129S1SvImJ_T0057184.1 MGP_129S1SvImJ_G0026387.1 mouse_genomes_project 2 124214407 124224000 - Ppip5k1 protein_coding retained_intron MGP_129S1SvImJ_T0057185.1 MGP_129S1SvImJ_G0026387.1 mouse_genomes_project 2 124219338 124243635 - Ppip5k1 protein_coding retained_intron MGP_129S1SvImJ_T0057186.1 MGP_129S1SvImJ_G0026387.1 mouse_genomes_project 2 124221458 124230545 - Ppip5k1 protein_coding retained_intron MGP_129S1SvImJ_T0057187.1 MGP_129S1SvImJ_G0026387.1 mouse_genomes_project 2 124227340 124243869 - Ppip5k1 protein_coding retained_intron MGP_129S1SvImJ_T0057188.1 MGP_129S1SvImJ_G0026387.1 mouse_genomes_project 2 124232095 124237330 - MGP_129S1SvImJ_P0057188 Ppip5k1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057189.1 MGP_129S1SvImJ_G0026387.1 mouse_genomes_project 2 124235145 124243888 - Ppip5k1 protein_coding retained_intron MGP_129S1SvImJ_T0057190.1 MGP_129S1SvImJ_G0026387.1 mouse_genomes_project 2 124235566 124243633 - Ppip5k1 protein_coding retained_intron MGP_129S1SvImJ_T0057191.1 MGP_129S1SvImJ_G0026387.1 mouse_genomes_project 2 124236730 124243630 - Ppip5k1 protein_coding retained_intron MGP_129S1SvImJ_T0057192.1 MGP_129S1SvImJ_G0026387.1 mouse_genomes_project 2 124239015 124243842 - MGP_129S1SvImJ_P0057192 Ppip5k1 protein_coding protein_coding MGP_129S1SvImJ_T0007142.1 MGP_129S1SvImJ_G0005863.1 mouse_genomes_project 2 6650818 6710852 + Gm13219 lincRNA lincRNA MGP_129S1SvImJ_T0007143.1 MGP_129S1SvImJ_G0005863.1 mouse_genomes_project 2 6650877 6751815 + Gm13219 lincRNA lincRNA MGP_129S1SvImJ_T0007144.1 MGP_129S1SvImJ_G0005863.1 mouse_genomes_project 2 6650907 6712213 + Gm13219 lincRNA lincRNA MGP_129S1SvImJ_T0013891.1 MGP_129S1SvImJ_G0011980.1 mouse_genomes_project 2 178475200 178475575 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059140.1 MGP_129S1SvImJ_G0026854.1 mouse_genomes_project 2 169913079 169916501 - MGP_129S1SvImJ_P0059140 Trp53tg5 protein_coding protein_coding MGP_129S1SvImJ_T0052848.1 MGP_129S1SvImJ_G0025393.1 mouse_genomes_project 2 20630083 20650580 + Pdss1 protein_coding processed_transcript MGP_129S1SvImJ_T0052849.1 MGP_129S1SvImJ_G0025393.1 mouse_genomes_project 2 20630083 20678413 + MGP_129S1SvImJ_P0052849 Pdss1 protein_coding protein_coding MGP_129S1SvImJ_T0052850.1 MGP_129S1SvImJ_G0025393.1 mouse_genomes_project 2 20630156 20654094 + MGP_129S1SvImJ_P0052850 Pdss1 protein_coding protein_coding MGP_129S1SvImJ_T0052851.1 MGP_129S1SvImJ_G0025393.1 mouse_genomes_project 2 20630180 20636392 + MGP_129S1SvImJ_P0052851 Pdss1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052852.1 MGP_129S1SvImJ_G0025393.1 mouse_genomes_project 2 20630609 20643128 + MGP_129S1SvImJ_P0052852 Pdss1 protein_coding protein_coding MGP_129S1SvImJ_T0052853.1 MGP_129S1SvImJ_G0025393.1 mouse_genomes_project 2 20672263 20678402 + Pdss1 protein_coding retained_intron MGP_129S1SvImJ_T0052854.1 MGP_129S1SvImJ_G0025393.1 mouse_genomes_project 2 20673699 20678389 + MGP_129S1SvImJ_P0052854 Pdss1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056335.1 MGP_129S1SvImJ_G0026185.1 mouse_genomes_project 2 95842625 95956562 - MGP_129S1SvImJ_P0056335 Ttc17 protein_coding protein_coding MGP_129S1SvImJ_T0056336.1 MGP_129S1SvImJ_G0026185.1 mouse_genomes_project 2 95842627 95956544 - MGP_129S1SvImJ_P0056336 Ttc17 protein_coding protein_coding MGP_129S1SvImJ_T0056337.1 MGP_129S1SvImJ_G0026185.1 mouse_genomes_project 2 95870645 95956553 - MGP_129S1SvImJ_P0056337 Ttc17 protein_coding protein_coding MGP_129S1SvImJ_T0056338.1 MGP_129S1SvImJ_G0026185.1 mouse_genomes_project 2 95898782 95906563 - Ttc17 protein_coding processed_transcript MGP_129S1SvImJ_T0056339.1 MGP_129S1SvImJ_G0026185.1 mouse_genomes_project 2 95925352 95954900 - Ttc17 protein_coding processed_transcript MGP_129S1SvImJ_T0055442.1 MGP_129S1SvImJ_G0025869.1 mouse_genomes_project 2 77071055 77092634 + MGP_129S1SvImJ_P0055442 Plekha3 protein_coding protein_coding MGP_129S1SvImJ_T0055443.1 MGP_129S1SvImJ_G0025869.1 mouse_genomes_project 2 77085658 77088570 + Plekha3 protein_coding processed_transcript MGP_129S1SvImJ_T0053057.1 MGP_129S1SvImJ_G0025431.1 mouse_genomes_project 2 23112618 23123181 - MGP_129S1SvImJ_P0053057 Ndor1 protein_coding protein_coding MGP_129S1SvImJ_T0053058.1 MGP_129S1SvImJ_G0025431.1 mouse_genomes_project 2 23112660 23123184 - MGP_129S1SvImJ_P0053058 Ndor1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053059.1 MGP_129S1SvImJ_G0025431.1 mouse_genomes_project 2 23113367 23115784 - Ndor1 protein_coding processed_transcript MGP_129S1SvImJ_T0053060.1 MGP_129S1SvImJ_G0025431.1 mouse_genomes_project 2 23115026 23123207 - MGP_129S1SvImJ_P0053060 Ndor1 protein_coding protein_coding MGP_129S1SvImJ_T0053061.1 MGP_129S1SvImJ_G0025431.1 mouse_genomes_project 2 23115225 23123184 - MGP_129S1SvImJ_P0053061 Ndor1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053062.1 MGP_129S1SvImJ_G0025431.1 mouse_genomes_project 2 23115384 23116269 - Ndor1 protein_coding retained_intron MGP_129S1SvImJ_T0053063.1 MGP_129S1SvImJ_G0025431.1 mouse_genomes_project 2 23117269 23123144 - MGP_129S1SvImJ_P0053063 Ndor1 protein_coding protein_coding MGP_129S1SvImJ_T0053064.1 MGP_129S1SvImJ_G0025431.1 mouse_genomes_project 2 23117297 23118140 - Ndor1 protein_coding retained_intron MGP_129S1SvImJ_T0053065.1 MGP_129S1SvImJ_G0025431.1 mouse_genomes_project 2 23117921 23123214 - MGP_129S1SvImJ_P0053065 Ndor1 protein_coding protein_coding MGP_129S1SvImJ_T0053066.1 MGP_129S1SvImJ_G0025431.1 mouse_genomes_project 2 23117972 23123166 - Ndor1 protein_coding processed_transcript MGP_129S1SvImJ_T0053067.1 MGP_129S1SvImJ_G0025431.1 mouse_genomes_project 2 23119285 23123059 - Ndor1 protein_coding retained_intron MGP_129S1SvImJ_T0053068.1 MGP_129S1SvImJ_G0025431.1 mouse_genomes_project 2 23119545 23123820 - MGP_129S1SvImJ_P0053068 Ndor1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0003963.1 MGP_129S1SvImJ_G0003538.1 mouse_genomes_project 2 29526294 29528172 - Gm13405 antisense antisense MGP_129S1SvImJ_T0055073.1 MGP_129S1SvImJ_G0025785.1 mouse_genomes_project 2 66331391 66498542 - MGP_129S1SvImJ_P0055073 Scn9a protein_coding protein_coding MGP_129S1SvImJ_T0055074.1 MGP_129S1SvImJ_G0025785.1 mouse_genomes_project 2 66331391 66498542 - MGP_129S1SvImJ_P0055074 Scn9a protein_coding protein_coding MGP_129S1SvImJ_T0055075.1 MGP_129S1SvImJ_G0025785.1 mouse_genomes_project 2 66333397 66498243 - MGP_129S1SvImJ_P0055075 Scn9a protein_coding protein_coding MGP_129S1SvImJ_T0055076.1 MGP_129S1SvImJ_G0025785.1 mouse_genomes_project 2 66333397 66498243 - MGP_129S1SvImJ_P0055076 Scn9a protein_coding protein_coding MGP_129S1SvImJ_T0055077.1 MGP_129S1SvImJ_G0025785.1 mouse_genomes_project 2 66334419 66498243 - MGP_129S1SvImJ_P0055077 Scn9a protein_coding protein_coding MGP_129S1SvImJ_T0055078.1 MGP_129S1SvImJ_G0025785.1 mouse_genomes_project 2 66394011 66397172 - Scn9a protein_coding retained_intron MGP_129S1SvImJ_T0055079.1 MGP_129S1SvImJ_G0025785.1 mouse_genomes_project 2 66420303 66498552 - Scn9a protein_coding retained_intron MGP_129S1SvImJ_T0001082.1 MGP_129S1SvImJ_G0001011.1 mouse_genomes_project 2 22731689 22736135 - TEC TEC MGP_129S1SvImJ_T0056839.1 MGP_129S1SvImJ_G0026326.1 mouse_genomes_project 2 121613200 121634456 + MGP_129S1SvImJ_P0056839 Bahd1 protein_coding protein_coding MGP_129S1SvImJ_T0056840.1 MGP_129S1SvImJ_G0026326.1 mouse_genomes_project 2 121614276 121643563 + MGP_129S1SvImJ_P0056840 Bahd1 protein_coding protein_coding MGP_129S1SvImJ_T0054371.1 MGP_129S1SvImJ_G0025646.1 mouse_genomes_project 2 33553056 33569467 - MGP_129S1SvImJ_P0054371 Traf1 protein_coding protein_coding MGP_129S1SvImJ_T0054372.1 MGP_129S1SvImJ_G0025646.1 mouse_genomes_project 2 33554566 33572886 - MGP_129S1SvImJ_P0054372 Traf1 protein_coding protein_coding MGP_129S1SvImJ_T0054373.1 MGP_129S1SvImJ_G0025646.1 mouse_genomes_project 2 33554568 33573073 - MGP_129S1SvImJ_P0054373 Traf1 protein_coding protein_coding MGP_129S1SvImJ_T0054374.1 MGP_129S1SvImJ_G0025646.1 mouse_genomes_project 2 33558860 33572883 - Traf1 protein_coding processed_transcript MGP_129S1SvImJ_T0054375.1 MGP_129S1SvImJ_G0025646.1 mouse_genomes_project 2 33567376 33569440 - MGP_129S1SvImJ_P0054375 Traf1 protein_coding protein_coding MGP_129S1SvImJ_T0054376.1 MGP_129S1SvImJ_G0025646.1 mouse_genomes_project 2 33567485 33569465 - Traf1 protein_coding retained_intron MGP_129S1SvImJ_T0054377.1 MGP_129S1SvImJ_G0025646.1 mouse_genomes_project 2 33567497 33570209 - Traf1 protein_coding processed_transcript MGP_129S1SvImJ_T0054378.1 MGP_129S1SvImJ_G0025646.1 mouse_genomes_project 2 33568850 33572898 - Traf1 protein_coding retained_intron MGP_129S1SvImJ_T0054379.1 MGP_129S1SvImJ_G0025646.1 mouse_genomes_project 2 33569455 33572863 - Traf1 protein_coding processed_transcript MGP_129S1SvImJ_T0055566.1 MGP_129S1SvImJ_G0025887.1 mouse_genomes_project 2 81212249 81258663 + Nup35 protein_coding retained_intron MGP_129S1SvImJ_T0055568.1 MGP_129S1SvImJ_G0025887.1 mouse_genomes_project 2 81238810 81258659 + MGP_129S1SvImJ_P0055568 Nup35 protein_coding protein_coding MGP_129S1SvImJ_T0055569.1 MGP_129S1SvImJ_G0025887.1 mouse_genomes_project 2 81238826 81255761 + MGP_129S1SvImJ_P0055569 Nup35 protein_coding protein_coding MGP_129S1SvImJ_T0055570.1 MGP_129S1SvImJ_G0025887.1 mouse_genomes_project 2 81239258 81246459 + Nup35 protein_coding processed_transcript MGP_129S1SvImJ_T0055571.1 MGP_129S1SvImJ_G0025887.1 mouse_genomes_project 2 81244198 81253171 + Nup35 protein_coding processed_transcript MGP_129S1SvImJ_T0004009.1 MGP_129S1SvImJ_G0003575.1 mouse_genomes_project 2 66288775 66400024 + Gm13629 antisense antisense MGP_129S1SvImJ_T0004010.1 MGP_129S1SvImJ_G0003575.1 mouse_genomes_project 2 66288791 66362530 + Gm13629 antisense antisense MGP_129S1SvImJ_T0004182.1 MGP_129S1SvImJ_G0003695.1 mouse_genomes_project 2 170424394 170432646 + Zfp335os antisense antisense MGP_129S1SvImJ_T0004183.1 MGP_129S1SvImJ_G0003695.1 mouse_genomes_project 2 170426969 170432252 + Zfp335os antisense antisense MGP_129S1SvImJ_T0056903.1 MGP_129S1SvImJ_G0026345.1 mouse_genomes_project 2 122319174 122375117 + MGP_129S1SvImJ_P0056903 Chp1 protein_coding protein_coding MGP_129S1SvImJ_T0056904.1 MGP_129S1SvImJ_G0026345.1 mouse_genomes_project 2 122319202 122375120 + MGP_129S1SvImJ_P0056904 Chp1 protein_coding protein_coding MGP_129S1SvImJ_T0056905.1 MGP_129S1SvImJ_G0026345.1 mouse_genomes_project 2 122319293 122360707 + Chp1 protein_coding retained_intron MGP_129S1SvImJ_T0056906.1 MGP_129S1SvImJ_G0026345.1 mouse_genomes_project 2 122345445 122374217 + Chp1 protein_coding retained_intron MGP_129S1SvImJ_T0098709.1 MGP_129S1SvImJ_G0036794.1 mouse_genomes_project 2 109333672 109333942 - Gm24885 ribozyme ribozyme MGP_129S1SvImJ_T0004154.1 MGP_129S1SvImJ_G0003674.1 mouse_genomes_project 2 160428161 160430796 + Gssos1 antisense antisense MGP_129S1SvImJ_T0056583.1 MGP_129S1SvImJ_G0026236.1 mouse_genomes_project 2 109296450 109300487 - MGP_129S1SvImJ_P0056583 Fshb protein_coding protein_coding MGP_129S1SvImJ_T0003957.1 MGP_129S1SvImJ_G0003533.1 mouse_genomes_project 2 27479202 27527937 - Gm13402 antisense antisense MGP_129S1SvImJ_T0057374.1 MGP_129S1SvImJ_G0026433.1 mouse_genomes_project 2 128940181 128989970 - MGP_129S1SvImJ_P0057374 Secisbp2l protein_coding protein_coding MGP_129S1SvImJ_T0057375.1 MGP_129S1SvImJ_G0026433.1 mouse_genomes_project 2 128947925 128963465 - MGP_129S1SvImJ_P0057375 Secisbp2l protein_coding protein_coding MGP_129S1SvImJ_T0057376.1 MGP_129S1SvImJ_G0026433.1 mouse_genomes_project 2 128953531 128955417 - Secisbp2l protein_coding retained_intron MGP_129S1SvImJ_T0013549.1 MGP_129S1SvImJ_G0011638.1 mouse_genomes_project 2 51971791 51973757 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058603.1 MGP_129S1SvImJ_G0026742.1 mouse_genomes_project 2 160589399 160593703 + MGP_129S1SvImJ_P0058603 Procr protein_coding protein_coding MGP_129S1SvImJ_T0058604.1 MGP_129S1SvImJ_G0026742.1 mouse_genomes_project 2 160589405 160592561 + MGP_129S1SvImJ_P0058604 Procr protein_coding protein_coding MGP_129S1SvImJ_T0058605.1 MGP_129S1SvImJ_G0026742.1 mouse_genomes_project 2 160589432 160592028 + Procr protein_coding retained_intron MGP_129S1SvImJ_T0058606.1 MGP_129S1SvImJ_G0026742.1 mouse_genomes_project 2 160589625 160593700 + Procr protein_coding processed_transcript MGP_129S1SvImJ_T0052485.1 MGP_129S1SvImJ_G0025333.1 mouse_genomes_project 2 7190686 7215434 - MGP_129S1SvImJ_P0052485 Gata3 protein_coding protein_coding MGP_129S1SvImJ_T0052486.1 MGP_129S1SvImJ_G0025333.1 mouse_genomes_project 2 7199257 7210507 - Gata3 protein_coding processed_transcript MGP_129S1SvImJ_T0052487.1 MGP_129S1SvImJ_G0025333.1 mouse_genomes_project 2 7211321 7212234 - Gata3 protein_coding processed_transcript MGP_129S1SvImJ_T0052488.1 MGP_129S1SvImJ_G0025333.1 mouse_genomes_project 2 7211536 7226840 - MGP_129S1SvImJ_P0052488 Gata3 protein_coding protein_coding MGP_129S1SvImJ_T0052489.1 MGP_129S1SvImJ_G0025333.1 mouse_genomes_project 2 7214669 7224590 - Gata3 protein_coding processed_transcript MGP_129S1SvImJ_T0052490.1 MGP_129S1SvImJ_G0025333.1 mouse_genomes_project 2 7214724 7226808 - Gata3 protein_coding processed_transcript MGP_129S1SvImJ_T0011527.1 MGP_129S1SvImJ_G0009643.1 mouse_genomes_project 2 107272122 107272416 - Gm27538 misc_RNA misc_RNA MGP_129S1SvImJ_T0013470.1 MGP_129S1SvImJ_G0011559.1 mouse_genomes_project 2 20951764 20953397 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0052780.1 MGP_129S1SvImJ_G0025381.1 mouse_genomes_project 2 17101924 17114358 + Msrb2 protein_coding processed_transcript MGP_129S1SvImJ_T0052781.1 MGP_129S1SvImJ_G0025381.1 mouse_genomes_project 2 17102120 17133183 + MGP_129S1SvImJ_P0052781 Msrb2 protein_coding protein_coding MGP_129S1SvImJ_T0052782.1 MGP_129S1SvImJ_G0025381.1 mouse_genomes_project 2 17102152 17131527 + Msrb2 protein_coding processed_transcript MGP_129S1SvImJ_T0052783.1 MGP_129S1SvImJ_G0025381.1 mouse_genomes_project 2 17102325 17132471 + Msrb2 protein_coding processed_transcript MGP_129S1SvImJ_T0059254.1 MGP_129S1SvImJ_G0026886.1 mouse_genomes_project 2 170580340 170587400 + MGP_129S1SvImJ_P0059254 Cd40 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059255.1 MGP_129S1SvImJ_G0026886.1 mouse_genomes_project 2 170580340 170601129 + MGP_129S1SvImJ_P0059255 Cd40 protein_coding protein_coding MGP_129S1SvImJ_T0059256.1 MGP_129S1SvImJ_G0026886.1 mouse_genomes_project 2 170580349 170598942 + MGP_129S1SvImJ_P0059256 Cd40 protein_coding protein_coding MGP_129S1SvImJ_T0059257.1 MGP_129S1SvImJ_G0026886.1 mouse_genomes_project 2 170580393 170598033 + MGP_129S1SvImJ_P0059257 Cd40 protein_coding protein_coding MGP_129S1SvImJ_T0059258.1 MGP_129S1SvImJ_G0026886.1 mouse_genomes_project 2 170580394 170587457 + MGP_129S1SvImJ_P0059258 Cd40 protein_coding protein_coding MGP_129S1SvImJ_T0059259.1 MGP_129S1SvImJ_G0026886.1 mouse_genomes_project 2 170580417 170598288 + MGP_129S1SvImJ_P0059259 Cd40 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059260.1 MGP_129S1SvImJ_G0026886.1 mouse_genomes_project 2 170587352 170591345 + Cd40 protein_coding retained_intron MGP_129S1SvImJ_T0001052.1 MGP_129S1SvImJ_G0000981.1 mouse_genomes_project 2 8725879 8726768 + TEC TEC MGP_129S1SvImJ_T0100992.1 MGP_129S1SvImJ_G0039059.1 mouse_genomes_project 2 163451947 163452080 + Gm25187 snoRNA snoRNA MGP_129S1SvImJ_T0056652.1 MGP_129S1SvImJ_G0026267.1 mouse_genomes_project 2 114031730 114032669 - MGP_129S1SvImJ_P0056652 protein_coding protein_coding MGP_129S1SvImJ_T0053918.1 MGP_129S1SvImJ_G0025579.1 mouse_genomes_project 2 29269429 29280957 - MGP_129S1SvImJ_P0053918 BC005624 protein_coding protein_coding MGP_129S1SvImJ_T0053919.1 MGP_129S1SvImJ_G0025579.1 mouse_genomes_project 2 29273138 29279522 - BC005624 protein_coding retained_intron MGP_129S1SvImJ_T0053920.1 MGP_129S1SvImJ_G0025579.1 mouse_genomes_project 2 29279918 29281217 - BC005624 protein_coding retained_intron MGP_129S1SvImJ_T0007230.1 MGP_129S1SvImJ_G0005933.1 mouse_genomes_project 2 72914285 72943266 + 8430437L04Rik lincRNA lincRNA MGP_129S1SvImJ_T0013735.1 MGP_129S1SvImJ_G0011824.1 mouse_genomes_project 2 114164333 114164489 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0052625.1 MGP_129S1SvImJ_G0025352.1 mouse_genomes_project 2 10403193 10473810 + MGP_129S1SvImJ_P0052625 Pter protein_coding protein_coding MGP_129S1SvImJ_T0052626.1 MGP_129S1SvImJ_G0025352.1 mouse_genomes_project 2 10403214 10452610 + Pter protein_coding processed_transcript MGP_129S1SvImJ_T0052627.1 MGP_129S1SvImJ_G0025352.1 mouse_genomes_project 2 10403221 10473811 + MGP_129S1SvImJ_P0052627 Pter protein_coding protein_coding MGP_129S1SvImJ_T0052628.1 MGP_129S1SvImJ_G0025352.1 mouse_genomes_project 2 10403244 10476285 + MGP_129S1SvImJ_P0052628 Pter protein_coding protein_coding MGP_129S1SvImJ_T0052629.1 MGP_129S1SvImJ_G0025352.1 mouse_genomes_project 2 10403252 10474444 + MGP_129S1SvImJ_P0052629 Pter protein_coding protein_coding MGP_129S1SvImJ_T0052630.1 MGP_129S1SvImJ_G0025352.1 mouse_genomes_project 2 10403253 10453992 + Pter protein_coding processed_transcript MGP_129S1SvImJ_T0052631.1 MGP_129S1SvImJ_G0025352.1 mouse_genomes_project 2 10450019 10474689 + Pter protein_coding retained_intron MGP_129S1SvImJ_T0013764.1 MGP_129S1SvImJ_G0011853.1 mouse_genomes_project 2 130976100 130977943 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001080.1 MGP_129S1SvImJ_G0001009.1 mouse_genomes_project 2 22016635 22018419 + TEC TEC MGP_129S1SvImJ_T0059306.1 MGP_129S1SvImJ_G0026897.1 mouse_genomes_project 2 171163314 171346581 + MGP_129S1SvImJ_P0059306 Eya2 protein_coding protein_coding MGP_129S1SvImJ_T0059307.1 MGP_129S1SvImJ_G0026897.1 mouse_genomes_project 2 171222851 171346589 + MGP_129S1SvImJ_P0059307 Eya2 protein_coding protein_coding MGP_129S1SvImJ_T0059308.1 MGP_129S1SvImJ_G0026897.1 mouse_genomes_project 2 171222871 171279537 + Eya2 protein_coding processed_transcript MGP_129S1SvImJ_T0059309.1 MGP_129S1SvImJ_G0026897.1 mouse_genomes_project 2 171276974 171339099 + Eya2 protein_coding processed_transcript MGP_129S1SvImJ_T0059310.1 MGP_129S1SvImJ_G0026897.1 mouse_genomes_project 2 171334658 171339968 + Eya2 protein_coding processed_transcript MGP_129S1SvImJ_T0059311.1 MGP_129S1SvImJ_G0026897.1 mouse_genomes_project 2 171344044 171346124 + Eya2 protein_coding processed_transcript MGP_129S1SvImJ_T0059820.1 MGP_129S1SvImJ_G0027015.1 mouse_genomes_project 2 187796628 187799468 + MGP_129S1SvImJ_P0059820 BC051628 protein_coding protein_coding MGP_129S1SvImJ_T0059821.1 MGP_129S1SvImJ_G0027015.1 mouse_genomes_project 2 187796652 187799063 + MGP_129S1SvImJ_P0059821 BC051628 protein_coding protein_coding MGP_129S1SvImJ_T0055722.1 MGP_129S1SvImJ_G0025932.1 mouse_genomes_project 2 86450304 86454835 - MGP_129S1SvImJ_P0055722 Olfr1006 protein_coding protein_coding MGP_129S1SvImJ_T0055723.1 MGP_129S1SvImJ_G0025932.1 mouse_genomes_project 2 86450304 86451267 - MGP_129S1SvImJ_P0055723 Olfr1006 protein_coding protein_coding MGP_129S1SvImJ_T0055481.1 MGP_129S1SvImJ_G0025872.1 mouse_genomes_project 2 77610146 77662828 - MGP_129S1SvImJ_P0055481 Sestd1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0055482.1 MGP_129S1SvImJ_G0025872.1 mouse_genomes_project 2 77619908 77622451 - Sestd1 protein_coding processed_transcript MGP_129S1SvImJ_T0055483.1 MGP_129S1SvImJ_G0025872.1 mouse_genomes_project 2 77619910 77705004 - Sestd1 protein_coding processed_transcript MGP_129S1SvImJ_T0013661.1 MGP_129S1SvImJ_G0011750.1 mouse_genomes_project 2 88427463 88428625 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102381.1 MGP_129S1SvImJ_G0040215.1 mouse_genomes_project 2 22049087 22060897 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0059880.1 MGP_129S1SvImJ_G0027024.1 mouse_genomes_project 2 187976756 188055674 - MGP_129S1SvImJ_P0059880 Zbtb46 protein_coding protein_coding MGP_129S1SvImJ_T0059881.1 MGP_129S1SvImJ_G0027024.1 mouse_genomes_project 2 187979880 188016183 - MGP_129S1SvImJ_P0059881 Zbtb46 protein_coding protein_coding MGP_129S1SvImJ_T0059882.1 MGP_129S1SvImJ_G0027024.1 mouse_genomes_project 2 188002339 188055674 - MGP_129S1SvImJ_P0059882 Zbtb46 protein_coding protein_coding MGP_129S1SvImJ_T0059883.1 MGP_129S1SvImJ_G0027024.1 mouse_genomes_project 2 188013348 188055674 - Zbtb46 protein_coding retained_intron MGP_129S1SvImJ_T0059884.1 MGP_129S1SvImJ_G0027024.1 mouse_genomes_project 2 188016022 188055645 - MGP_129S1SvImJ_P0059884 Zbtb46 protein_coding protein_coding MGP_129S1SvImJ_T0013873.1 MGP_129S1SvImJ_G0011962.1 mouse_genomes_project 2 169949890 169950615 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056846.1 MGP_129S1SvImJ_G0026329.1 mouse_genomes_project 2 121762927 121767898 + MGP_129S1SvImJ_P0056846 Rpusd2 protein_coding protein_coding MGP_129S1SvImJ_T0058313.1 MGP_129S1SvImJ_G0026666.1 mouse_genomes_project 2 157102289 157103674 - MGP_129S1SvImJ_P0058313 Defb29 protein_coding protein_coding MGP_129S1SvImJ_T0059646.1 MGP_129S1SvImJ_G0026978.1 mouse_genomes_project 2 184845513 184855490 + MGP_129S1SvImJ_P0059646 Fam217b protein_coding protein_coding MGP_129S1SvImJ_T0059647.1 MGP_129S1SvImJ_G0026978.1 mouse_genomes_project 2 184845571 184851290 + Fam217b protein_coding processed_transcript MGP_129S1SvImJ_T0054484.1 MGP_129S1SvImJ_G0025669.1 mouse_genomes_project 2 35250664 35251594 + MGP_129S1SvImJ_P0054484 Olfr344 protein_coding protein_coding MGP_129S1SvImJ_T0007317.1 MGP_129S1SvImJ_G0006001.1 mouse_genomes_project 2 120472445 120478581 - Gm13985 lincRNA lincRNA MGP_129S1SvImJ_T0057425.1 MGP_129S1SvImJ_G0026444.1 mouse_genomes_project 2 129942438 130021223 - MGP_129S1SvImJ_P0057425 Usp50 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057426.1 MGP_129S1SvImJ_G0026444.1 mouse_genomes_project 2 129998935 130008349 - Usp50 protein_coding processed_transcript MGP_129S1SvImJ_T0057427.1 MGP_129S1SvImJ_G0026444.1 mouse_genomes_project 2 129999306 130021229 - MGP_129S1SvImJ_P0057427 Usp50 protein_coding protein_coding MGP_129S1SvImJ_T0057428.1 MGP_129S1SvImJ_G0026444.1 mouse_genomes_project 2 130013568 130021222 - MGP_129S1SvImJ_P0057428 Usp50 protein_coding protein_coding MGP_129S1SvImJ_T0057429.1 MGP_129S1SvImJ_G0026444.1 mouse_genomes_project 2 130015473 130021243 - Usp50 protein_coding retained_intron MGP_129S1SvImJ_T0013756.1 MGP_129S1SvImJ_G0011845.1 mouse_genomes_project 2 124644366 124645326 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013701.1 MGP_129S1SvImJ_G0011790.1 mouse_genomes_project 2 104106652 104108094 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057663.1 MGP_129S1SvImJ_G0026502.1 mouse_genomes_project 2 133863988 133864800 + MGP_129S1SvImJ_P0057663 1700020A23Rik protein_coding protein_coding MGP_129S1SvImJ_T0057664.1 MGP_129S1SvImJ_G0026502.1 mouse_genomes_project 2 133863994 133864748 + MGP_129S1SvImJ_P0057664 1700020A23Rik protein_coding protein_coding MGP_129S1SvImJ_T0057665.1 MGP_129S1SvImJ_G0026502.1 mouse_genomes_project 2 133864015 133864804 + MGP_129S1SvImJ_P0057665 1700020A23Rik protein_coding protein_coding MGP_129S1SvImJ_T0052450.1 MGP_129S1SvImJ_G0025330.1 mouse_genomes_project 2 3341207 3363087 - MGP_129S1SvImJ_P0052450 Echdc3 protein_coding protein_coding MGP_129S1SvImJ_T0052451.1 MGP_129S1SvImJ_G0025330.1 mouse_genomes_project 2 3342251 3348951 - Echdc3 protein_coding processed_transcript MGP_129S1SvImJ_T0052452.1 MGP_129S1SvImJ_G0025330.1 mouse_genomes_project 2 3356058 3363033 - Echdc3 protein_coding retained_intron MGP_129S1SvImJ_T0052453.1 MGP_129S1SvImJ_G0025331.1 mouse_genomes_project 2 3478702 3612692 + MGP_129S1SvImJ_P0052453 Usp6nl protein_coding protein_coding MGP_129S1SvImJ_T0052454.1 MGP_129S1SvImJ_G0025331.1 mouse_genomes_project 2 3478807 3587314 + Usp6nl protein_coding processed_transcript MGP_129S1SvImJ_T0052455.1 MGP_129S1SvImJ_G0025331.1 mouse_genomes_project 2 3509927 3609796 + MGP_129S1SvImJ_P0052455 Usp6nl protein_coding protein_coding MGP_129S1SvImJ_T0052456.1 MGP_129S1SvImJ_G0025331.1 mouse_genomes_project 2 3587223 3591137 + Usp6nl protein_coding processed_transcript MGP_129S1SvImJ_T0058279.1 MGP_129S1SvImJ_G0026652.1 mouse_genomes_project 2 156676223 156681759 + MGP_129S1SvImJ_P0058279 Tcf15 protein_coding protein_coding MGP_129S1SvImJ_T0001047.1 MGP_129S1SvImJ_G0000976.1 mouse_genomes_project 2 7400173 7401855 + TEC TEC MGP_129S1SvImJ_T0055418.1 MGP_129S1SvImJ_G0025860.1 mouse_genomes_project 2 76364150 76366015 - MGP_129S1SvImJ_P0055418 protein_coding protein_coding MGP_129S1SvImJ_T0059657.1 MGP_129S1SvImJ_G0026981.1 mouse_genomes_project 2 186393665 186466187 - MGP_129S1SvImJ_P0059657 Taf4 protein_coding protein_coding MGP_129S1SvImJ_T0059658.1 MGP_129S1SvImJ_G0026981.1 mouse_genomes_project 2 186394952 186465867 - MGP_129S1SvImJ_P0059658 Taf4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0059659.1 MGP_129S1SvImJ_G0026981.1 mouse_genomes_project 2 186402714 186403697 - Taf4 protein_coding processed_transcript MGP_129S1SvImJ_T0059660.1 MGP_129S1SvImJ_G0026981.1 mouse_genomes_project 2 186403492 186410780 - Taf4 protein_coding processed_transcript MGP_129S1SvImJ_T0099676.1 MGP_129S1SvImJ_G0037743.1 mouse_genomes_project 2 71561791 71561892 - Gm23166 snRNA snRNA MGP_129S1SvImJ_T0003913.1 MGP_129S1SvImJ_G0003499.1 mouse_genomes_project 2 3345993 3477647 + A230108P19Rik antisense antisense MGP_129S1SvImJ_T0058042.1 MGP_129S1SvImJ_G0026587.1 mouse_genomes_project 2 148633881 148647765 + MGP_129S1SvImJ_P0058042 Polr3f protein_coding protein_coding MGP_129S1SvImJ_T0058043.1 MGP_129S1SvImJ_G0026587.1 mouse_genomes_project 2 148633905 148636851 + Polr3f protein_coding processed_transcript MGP_129S1SvImJ_T0058044.1 MGP_129S1SvImJ_G0026587.1 mouse_genomes_project 2 148633911 148641288 + MGP_129S1SvImJ_P0058044 Polr3f protein_coding protein_coding MGP_129S1SvImJ_T0058045.1 MGP_129S1SvImJ_G0026587.1 mouse_genomes_project 2 148633943 148640805 + Polr3f protein_coding processed_transcript MGP_129S1SvImJ_T0058046.1 MGP_129S1SvImJ_G0026587.1 mouse_genomes_project 2 148638471 148644571 + Polr3f protein_coding processed_transcript MGP_129S1SvImJ_T0058047.1 MGP_129S1SvImJ_G0026587.1 mouse_genomes_project 2 148641718 148642403 + Polr3f protein_coding processed_transcript MGP_129S1SvImJ_T0058048.1 MGP_129S1SvImJ_G0026587.1 mouse_genomes_project 2 148641950 148644671 + Polr3f protein_coding processed_transcript MGP_129S1SvImJ_T0098573.1 MGP_129S1SvImJ_G0036658.1 mouse_genomes_project 2 171827818 171827923 + Gm22687 rRNA rRNA MGP_129S1SvImJ_T0013717.1 MGP_129S1SvImJ_G0011806.1 mouse_genomes_project 2 108203620 108203776 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057294.1 MGP_129S1SvImJ_G0026414.1 mouse_genomes_project 2 125349414 125368724 - MGP_129S1SvImJ_P0057294 protein_coding protein_coding MGP_129S1SvImJ_T0057295.1 MGP_129S1SvImJ_G0026414.1 mouse_genomes_project 2 125349415 125370814 - MGP_129S1SvImJ_P0057295 protein_coding protein_coding MGP_129S1SvImJ_T0057296.1 MGP_129S1SvImJ_G0026414.1 mouse_genomes_project 2 125349650 125371058 - MGP_129S1SvImJ_P0057296 protein_coding protein_coding MGP_129S1SvImJ_T0057297.1 MGP_129S1SvImJ_G0026414.1 mouse_genomes_project 2 125349650 125361444 - MGP_129S1SvImJ_P0057297 protein_coding protein_coding MGP_129S1SvImJ_T0057298.1 MGP_129S1SvImJ_G0026414.1 mouse_genomes_project 2 125349650 125370728 - MGP_129S1SvImJ_P0057298 protein_coding protein_coding MGP_129S1SvImJ_T0057299.1 MGP_129S1SvImJ_G0026414.1 mouse_genomes_project 2 125349721 125360127 - MGP_129S1SvImJ_P0057299 protein_coding protein_coding MGP_129S1SvImJ_T0057300.1 MGP_129S1SvImJ_G0026414.1 mouse_genomes_project 2 125349721 125360101 - MGP_129S1SvImJ_P0057300 protein_coding protein_coding MGP_129S1SvImJ_T0057301.1 MGP_129S1SvImJ_G0026414.1 mouse_genomes_project 2 125349875 125371028 - MGP_129S1SvImJ_P0057301 protein_coding protein_coding MGP_129S1SvImJ_T0057302.1 MGP_129S1SvImJ_G0026414.1 mouse_genomes_project 2 125349910 125359081 - MGP_129S1SvImJ_P0057302 protein_coding protein_coding MGP_129S1SvImJ_T0057303.1 MGP_129S1SvImJ_G0026414.1 mouse_genomes_project 2 125350026 125355974 - protein_coding retained_intron MGP_129S1SvImJ_T0052605.1 MGP_129S1SvImJ_G0025351.1 mouse_genomes_project 2 9792850 9866323 - Fam188a protein_coding processed_transcript MGP_129S1SvImJ_T0052606.1 MGP_129S1SvImJ_G0025351.1 mouse_genomes_project 2 9792850 9866345 - MGP_129S1SvImJ_P0052606 Fam188a protein_coding protein_coding MGP_129S1SvImJ_T0052607.1 MGP_129S1SvImJ_G0025351.1 mouse_genomes_project 2 9792850 9866323 - MGP_129S1SvImJ_P0052607 Fam188a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052608.1 MGP_129S1SvImJ_G0025351.1 mouse_genomes_project 2 9792850 9866319 - MGP_129S1SvImJ_P0052608 Fam188a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052609.1 MGP_129S1SvImJ_G0025351.1 mouse_genomes_project 2 9792850 9866310 - MGP_129S1SvImJ_P0052609 Fam188a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052610.1 MGP_129S1SvImJ_G0025351.1 mouse_genomes_project 2 9792853 9866327 - MGP_129S1SvImJ_P0052610 Fam188a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052611.1 MGP_129S1SvImJ_G0025351.1 mouse_genomes_project 2 9793219 9802499 - MGP_129S1SvImJ_P0052611 Fam188a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052612.1 MGP_129S1SvImJ_G0025351.1 mouse_genomes_project 2 9793505 9843245 - Fam188a protein_coding retained_intron MGP_129S1SvImJ_T0052613.1 MGP_129S1SvImJ_G0025351.1 mouse_genomes_project 2 9793553 9866163 - Fam188a protein_coding processed_transcript MGP_129S1SvImJ_T0052614.1 MGP_129S1SvImJ_G0025351.1 mouse_genomes_project 2 9796517 9866285 - MGP_129S1SvImJ_P0052614 Fam188a protein_coding protein_coding MGP_129S1SvImJ_T0052615.1 MGP_129S1SvImJ_G0025351.1 mouse_genomes_project 2 9802372 9866306 - Fam188a protein_coding retained_intron MGP_129S1SvImJ_T0052616.1 MGP_129S1SvImJ_G0025351.1 mouse_genomes_project 2 9809915 9811760 - Fam188a protein_coding retained_intron MGP_129S1SvImJ_T0052617.1 MGP_129S1SvImJ_G0025351.1 mouse_genomes_project 2 9810084 9866324 - MGP_129S1SvImJ_P0052617 Fam188a protein_coding protein_coding MGP_129S1SvImJ_T0052618.1 MGP_129S1SvImJ_G0025351.1 mouse_genomes_project 2 9831449 9832285 - Fam188a protein_coding retained_intron MGP_129S1SvImJ_T0052619.1 MGP_129S1SvImJ_G0025351.1 mouse_genomes_project 2 9832150 9855818 - MGP_129S1SvImJ_P0052619 Fam188a protein_coding protein_coding MGP_129S1SvImJ_T0052620.1 MGP_129S1SvImJ_G0025351.1 mouse_genomes_project 2 9845726 9866316 - Fam188a protein_coding retained_intron MGP_129S1SvImJ_T0052621.1 MGP_129S1SvImJ_G0025351.1 mouse_genomes_project 2 9846111 9855957 - Fam188a protein_coding retained_intron MGP_129S1SvImJ_T0052622.1 MGP_129S1SvImJ_G0025351.1 mouse_genomes_project 2 9847126 9866266 - MGP_129S1SvImJ_P0052622 Fam188a protein_coding protein_coding MGP_129S1SvImJ_T0052623.1 MGP_129S1SvImJ_G0025351.1 mouse_genomes_project 2 9847137 9866124 - MGP_129S1SvImJ_P0052623 Fam188a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052624.1 MGP_129S1SvImJ_G0025351.1 mouse_genomes_project 2 9850065 9850797 - Fam188a protein_coding processed_transcript MGP_129S1SvImJ_T0013906.1 MGP_129S1SvImJ_G0011995.1 mouse_genomes_project 2 188551605 188551905 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055601.1 MGP_129S1SvImJ_G0025897.1 mouse_genomes_project 2 84613358 84614549 + MGP_129S1SvImJ_P0055601 protein_coding protein_coding MGP_129S1SvImJ_T0010503.1 MGP_129S1SvImJ_G0008619.1 mouse_genomes_project 2 180613552 180613634 - Mir298 miRNA miRNA MGP_129S1SvImJ_T0057702.1 MGP_129S1SvImJ_G0026514.1 mouse_genomes_project 2 134141492 134155520 + MGP_129S1SvImJ_P0057702 Itpa protein_coding protein_coding MGP_129S1SvImJ_T0057703.1 MGP_129S1SvImJ_G0026514.1 mouse_genomes_project 2 134141687 134149921 + Itpa protein_coding retained_intron MGP_129S1SvImJ_T0057704.1 MGP_129S1SvImJ_G0026514.1 mouse_genomes_project 2 134141690 134149628 + Itpa protein_coding processed_transcript MGP_129S1SvImJ_T0057705.1 MGP_129S1SvImJ_G0026514.1 mouse_genomes_project 2 134141708 134145986 + Itpa protein_coding retained_intron MGP_129S1SvImJ_T0057706.1 MGP_129S1SvImJ_G0026514.1 mouse_genomes_project 2 134141747 134154938 + Itpa protein_coding processed_transcript MGP_129S1SvImJ_T0057305.1 MGP_129S1SvImJ_G0026416.1 mouse_genomes_project 2 125457538 125554095 + protein_coding processed_transcript MGP_129S1SvImJ_T0057306.1 MGP_129S1SvImJ_G0026416.1 mouse_genomes_project 2 125509065 125554774 + MGP_129S1SvImJ_P0057306 protein_coding protein_coding MGP_129S1SvImJ_T0013420.1 MGP_129S1SvImJ_G0011509.1 mouse_genomes_project 2 1905807 1906284 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102417.1 MGP_129S1SvImJ_G0040251.1 mouse_genomes_project 2 88580528 88581384 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0004013.1 MGP_129S1SvImJ_G0003578.1 mouse_genomes_project 2 68394393 68396064 + Gm13596 antisense antisense MGP_129S1SvImJ_T0007246.1 MGP_129S1SvImJ_G0005944.1 mouse_genomes_project 2 75070876 75071519 + Gm14426 lincRNA lincRNA MGP_129S1SvImJ_T0052977.1 MGP_129S1SvImJ_G0025417.1 mouse_genomes_project 2 22820317 22903887 + MGP_129S1SvImJ_P0052977 Pnpla7 protein_coding protein_coding MGP_129S1SvImJ_T0052978.1 MGP_129S1SvImJ_G0025417.1 mouse_genomes_project 2 22820357 22903887 + MGP_129S1SvImJ_P0052978 Pnpla7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052979.1 MGP_129S1SvImJ_G0025417.1 mouse_genomes_project 2 22820372 22826013 + MGP_129S1SvImJ_P0052979 Pnpla7 protein_coding protein_coding MGP_129S1SvImJ_T0052980.1 MGP_129S1SvImJ_G0025417.1 mouse_genomes_project 2 22820373 22841852 + MGP_129S1SvImJ_P0052980 Pnpla7 protein_coding protein_coding MGP_129S1SvImJ_T0052981.1 MGP_129S1SvImJ_G0025417.1 mouse_genomes_project 2 22820385 22824081 + Pnpla7 protein_coding processed_transcript MGP_129S1SvImJ_T0052982.1 MGP_129S1SvImJ_G0025417.1 mouse_genomes_project 2 22820432 22889489 + Pnpla7 protein_coding retained_intron MGP_129S1SvImJ_T0052983.1 MGP_129S1SvImJ_G0025417.1 mouse_genomes_project 2 22826093 22832982 + Pnpla7 protein_coding processed_transcript MGP_129S1SvImJ_T0052984.1 MGP_129S1SvImJ_G0025417.1 mouse_genomes_project 2 22842206 22845210 + Pnpla7 protein_coding retained_intron MGP_129S1SvImJ_T0052985.1 MGP_129S1SvImJ_G0025417.1 mouse_genomes_project 2 22842686 22860701 + MGP_129S1SvImJ_P0052985 Pnpla7 protein_coding protein_coding MGP_129S1SvImJ_T0052986.1 MGP_129S1SvImJ_G0025417.1 mouse_genomes_project 2 22889616 22903887 + Pnpla7 protein_coding retained_intron MGP_129S1SvImJ_T0052987.1 MGP_129S1SvImJ_G0025417.1 mouse_genomes_project 2 22901181 22901920 + Pnpla7 protein_coding retained_intron MGP_129S1SvImJ_T0052988.1 MGP_129S1SvImJ_G0025417.1 mouse_genomes_project 2 22901495 22903598 + MGP_129S1SvImJ_P0052988 Pnpla7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052989.1 MGP_129S1SvImJ_G0025417.1 mouse_genomes_project 2 22901550 22902166 + Pnpla7 protein_coding retained_intron MGP_129S1SvImJ_T0052990.1 MGP_129S1SvImJ_G0025417.1 mouse_genomes_project 2 22901737 22902681 + Pnpla7 protein_coding retained_intron MGP_129S1SvImJ_T0052991.1 MGP_129S1SvImJ_G0025417.1 mouse_genomes_project 2 22902983 22903685 + Pnpla7 protein_coding retained_intron MGP_129S1SvImJ_T0007327.1 MGP_129S1SvImJ_G0006009.1 mouse_genomes_project 2 127866034 127868516 + Gm13994 lincRNA lincRNA MGP_129S1SvImJ_T0053709.1 MGP_129S1SvImJ_G0025549.1 mouse_genomes_project 2 28152211 28225338 + MGP_129S1SvImJ_P0053709 Sptan1 protein_coding protein_coding MGP_129S1SvImJ_T0053710.1 MGP_129S1SvImJ_G0025549.1 mouse_genomes_project 2 28152211 28225341 + MGP_129S1SvImJ_P0053710 Sptan1 protein_coding protein_coding MGP_129S1SvImJ_T0053711.1 MGP_129S1SvImJ_G0025549.1 mouse_genomes_project 2 28152328 28187699 + Sptan1 protein_coding retained_intron MGP_129S1SvImJ_T0053712.1 MGP_129S1SvImJ_G0025549.1 mouse_genomes_project 2 28152330 28153801 + Sptan1 protein_coding retained_intron MGP_129S1SvImJ_T0053713.1 MGP_129S1SvImJ_G0025549.1 mouse_genomes_project 2 28152331 28172963 + MGP_129S1SvImJ_P0053713 Sptan1 protein_coding protein_coding MGP_129S1SvImJ_T0053714.1 MGP_129S1SvImJ_G0025549.1 mouse_genomes_project 2 28152331 28225335 + MGP_129S1SvImJ_P0053714 Sptan1 protein_coding protein_coding MGP_129S1SvImJ_T0053715.1 MGP_129S1SvImJ_G0025549.1 mouse_genomes_project 2 28152331 28225341 + MGP_129S1SvImJ_P0053715 Sptan1 protein_coding protein_coding MGP_129S1SvImJ_T0053716.1 MGP_129S1SvImJ_G0025549.1 mouse_genomes_project 2 28152334 28225341 + MGP_129S1SvImJ_P0053716 Sptan1 protein_coding protein_coding MGP_129S1SvImJ_T0053717.1 MGP_129S1SvImJ_G0025549.1 mouse_genomes_project 2 28165023 28225074 + MGP_129S1SvImJ_P0053717 Sptan1 protein_coding protein_coding MGP_129S1SvImJ_T0053718.1 MGP_129S1SvImJ_G0025549.1 mouse_genomes_project 2 28185617 28187692 + Sptan1 protein_coding retained_intron MGP_129S1SvImJ_T0053719.1 MGP_129S1SvImJ_G0025549.1 mouse_genomes_project 2 28195760 28201979 + Sptan1 protein_coding retained_intron MGP_129S1SvImJ_T0053720.1 MGP_129S1SvImJ_G0025549.1 mouse_genomes_project 2 28197964 28200523 + Sptan1 protein_coding retained_intron MGP_129S1SvImJ_T0053721.1 MGP_129S1SvImJ_G0025549.1 mouse_genomes_project 2 28215710 28218873 + Sptan1 protein_coding retained_intron MGP_129S1SvImJ_T0053722.1 MGP_129S1SvImJ_G0025549.1 mouse_genomes_project 2 28221453 28224407 + Sptan1 protein_coding retained_intron MGP_129S1SvImJ_T0053723.1 MGP_129S1SvImJ_G0025549.1 mouse_genomes_project 2 28221486 28224391 + Sptan1 protein_coding retained_intron MGP_129S1SvImJ_T0053724.1 MGP_129S1SvImJ_G0025549.1 mouse_genomes_project 2 28224198 28225065 + Sptan1 protein_coding retained_intron MGP_129S1SvImJ_T0054153.1 MGP_129S1SvImJ_G0025613.1 mouse_genomes_project 2 31063124 31075728 + MGP_129S1SvImJ_P0054153 St6galnac4 protein_coding protein_coding MGP_129S1SvImJ_T0054154.1 MGP_129S1SvImJ_G0025613.1 mouse_genomes_project 2 31063168 31070305 + St6galnac4 protein_coding retained_intron MGP_129S1SvImJ_T0054155.1 MGP_129S1SvImJ_G0025613.1 mouse_genomes_project 2 31063610 31073731 + St6galnac4 protein_coding retained_intron MGP_129S1SvImJ_T0054156.1 MGP_129S1SvImJ_G0025613.1 mouse_genomes_project 2 31063654 31075105 + MGP_129S1SvImJ_P0054156 St6galnac4 protein_coding protein_coding MGP_129S1SvImJ_T0054157.1 MGP_129S1SvImJ_G0025613.1 mouse_genomes_project 2 31070305 31073219 + MGP_129S1SvImJ_P0054157 St6galnac4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0013759.1 MGP_129S1SvImJ_G0011848.1 mouse_genomes_project 2 125489781 125490374 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013706.1 MGP_129S1SvImJ_G0011795.1 mouse_genomes_project 2 105816609 105817083 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017884.1 MGP_129S1SvImJ_G0015463.1 mouse_genomes_project 2 125660870 125662997 + processed_transcript processed_transcript MGP_129S1SvImJ_T0017885.1 MGP_129S1SvImJ_G0015463.1 mouse_genomes_project 2 125660891 125674178 + processed_transcript processed_transcript MGP_129S1SvImJ_T0007190.1 MGP_129S1SvImJ_G0005898.1 mouse_genomes_project 2 34152587 34155147 + Gm35202 lincRNA lincRNA MGP_129S1SvImJ_T0007279.1 MGP_129S1SvImJ_G0005971.1 mouse_genomes_project 2 97414625 97417110 + Gm13799 lincRNA lincRNA MGP_129S1SvImJ_T0013453.1 MGP_129S1SvImJ_G0011542.1 mouse_genomes_project 2 15666219 15666484 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053358.1 MGP_129S1SvImJ_G0025488.1 mouse_genomes_project 2 24345852 24348835 - MGP_129S1SvImJ_P0053358 Inpp5e protein_coding protein_coding MGP_129S1SvImJ_T0053359.1 MGP_129S1SvImJ_G0025488.1 mouse_genomes_project 2 24346390 24360135 - Inpp5e protein_coding processed_transcript MGP_129S1SvImJ_T0053360.1 MGP_129S1SvImJ_G0025488.1 mouse_genomes_project 2 24346633 24360154 - Inpp5e protein_coding processed_transcript MGP_129S1SvImJ_T0053361.1 MGP_129S1SvImJ_G0025488.1 mouse_genomes_project 2 24347175 24359538 - MGP_129S1SvImJ_P0053361 Inpp5e protein_coding protein_coding MGP_129S1SvImJ_T0053362.1 MGP_129S1SvImJ_G0025488.1 mouse_genomes_project 2 24348623 24349840 - Inpp5e protein_coding processed_transcript MGP_129S1SvImJ_T0053363.1 MGP_129S1SvImJ_G0025488.1 mouse_genomes_project 2 24348776 24351570 - MGP_129S1SvImJ_P0053363 Inpp5e protein_coding protein_coding MGP_129S1SvImJ_T0011524.1 MGP_129S1SvImJ_G0009640.1 mouse_genomes_project 2 74120881 74121048 - Gm27421 misc_RNA misc_RNA MGP_129S1SvImJ_T0052878.1 MGP_129S1SvImJ_G0025397.1 mouse_genomes_project 2 20902940 20948992 + MGP_129S1SvImJ_P0052878 Yme1l1 protein_coding protein_coding MGP_129S1SvImJ_T0052879.1 MGP_129S1SvImJ_G0025397.1 mouse_genomes_project 2 20903089 20924158 + Yme1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0052880.1 MGP_129S1SvImJ_G0025397.1 mouse_genomes_project 2 20903099 20907187 + Yme1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0052881.1 MGP_129S1SvImJ_G0025397.1 mouse_genomes_project 2 20903404 20911668 + Yme1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0052882.1 MGP_129S1SvImJ_G0025397.1 mouse_genomes_project 2 20915463 20920686 + Yme1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0052883.1 MGP_129S1SvImJ_G0025397.1 mouse_genomes_project 2 20942189 20944426 + Yme1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0056078.1 MGP_129S1SvImJ_G0026144.1 mouse_genomes_project 2 92490696 92502884 - Nr1h3 protein_coding retained_intron MGP_129S1SvImJ_T0056079.1 MGP_129S1SvImJ_G0026144.1 mouse_genomes_project 2 92490696 92502975 - MGP_129S1SvImJ_P0056079 Nr1h3 protein_coding protein_coding MGP_129S1SvImJ_T0056080.1 MGP_129S1SvImJ_G0026144.1 mouse_genomes_project 2 92490696 92502894 - MGP_129S1SvImJ_P0056080 Nr1h3 protein_coding protein_coding MGP_129S1SvImJ_T0056081.1 MGP_129S1SvImJ_G0026144.1 mouse_genomes_project 2 92490727 92503010 - MGP_129S1SvImJ_P0056081 Nr1h3 protein_coding protein_coding MGP_129S1SvImJ_T0056082.1 MGP_129S1SvImJ_G0026144.1 mouse_genomes_project 2 92490727 92502744 - MGP_129S1SvImJ_P0056082 Nr1h3 protein_coding protein_coding MGP_129S1SvImJ_T0056083.1 MGP_129S1SvImJ_G0026144.1 mouse_genomes_project 2 92490841 92500603 - Nr1h3 protein_coding retained_intron MGP_129S1SvImJ_T0056084.1 MGP_129S1SvImJ_G0026144.1 mouse_genomes_project 2 92497975 92498726 - Nr1h3 protein_coding retained_intron MGP_129S1SvImJ_T0056085.1 MGP_129S1SvImJ_G0026144.1 mouse_genomes_project 2 92499889 92511930 - Nr1h3 protein_coding processed_transcript MGP_129S1SvImJ_T0052834.1 MGP_129S1SvImJ_G0025389.1 mouse_genomes_project 2 19187738 19668114 + MGP_129S1SvImJ_P0052834 Gpr158 protein_coding protein_coding MGP_129S1SvImJ_T0052835.1 MGP_129S1SvImJ_G0025389.1 mouse_genomes_project 2 19187763 19644702 + Gpr158 protein_coding retained_intron MGP_129S1SvImJ_T0058350.1 MGP_129S1SvImJ_G0026682.1 mouse_genomes_project 2 157543952 157554380 - MGP_129S1SvImJ_P0058350 Dusp15 protein_coding protein_coding MGP_129S1SvImJ_T0058351.1 MGP_129S1SvImJ_G0026682.1 mouse_genomes_project 2 157543977 157547512 - Dusp15 protein_coding retained_intron MGP_129S1SvImJ_T0058352.1 MGP_129S1SvImJ_G0026682.1 mouse_genomes_project 2 157547888 157554506 - MGP_129S1SvImJ_P0058352 Dusp15 protein_coding protein_coding MGP_129S1SvImJ_T0058353.1 MGP_129S1SvImJ_G0026682.1 mouse_genomes_project 2 157547932 157554622 - MGP_129S1SvImJ_P0058353 Dusp15 protein_coding protein_coding MGP_129S1SvImJ_T0055948.1 MGP_129S1SvImJ_G0026122.1 mouse_genomes_project 2 91344530 91345457 - MGP_129S1SvImJ_P0055948 Olfr32 protein_coding protein_coding MGP_129S1SvImJ_T0013639.1 MGP_129S1SvImJ_G0011728.1 mouse_genomes_project 2 83207538 83208129 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013787.1 MGP_129S1SvImJ_G0011876.1 mouse_genomes_project 2 136852679 136853289 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054883.1 MGP_129S1SvImJ_G0025757.1 mouse_genomes_project 2 59408782 59445985 - MGP_129S1SvImJ_P0054883 Wdsub1 protein_coding protein_coding MGP_129S1SvImJ_T0054884.1 MGP_129S1SvImJ_G0025757.1 mouse_genomes_project 2 59412933 59445948 - MGP_129S1SvImJ_P0054884 Wdsub1 protein_coding protein_coding MGP_129S1SvImJ_T0054885.1 MGP_129S1SvImJ_G0025757.1 mouse_genomes_project 2 59423511 59424914 - Wdsub1 protein_coding processed_transcript MGP_129S1SvImJ_T0054886.1 MGP_129S1SvImJ_G0025757.1 mouse_genomes_project 2 59423520 59423868 - Wdsub1 protein_coding processed_transcript MGP_129S1SvImJ_T0054887.1 MGP_129S1SvImJ_G0025757.1 mouse_genomes_project 2 59423748 59440243 - MGP_129S1SvImJ_P0054887 Wdsub1 protein_coding protein_coding MGP_129S1SvImJ_T0054888.1 MGP_129S1SvImJ_G0025757.1 mouse_genomes_project 2 59423875 59425749 - Wdsub1 protein_coding processed_transcript MGP_129S1SvImJ_T0054889.1 MGP_129S1SvImJ_G0025757.1 mouse_genomes_project 2 59424860 59445958 - Wdsub1 protein_coding processed_transcript MGP_129S1SvImJ_T0054890.1 MGP_129S1SvImJ_G0025757.1 mouse_genomes_project 2 59433731 59441565 - MGP_129S1SvImJ_P0054890 Wdsub1 protein_coding protein_coding MGP_129S1SvImJ_T0054891.1 MGP_129S1SvImJ_G0025757.1 mouse_genomes_project 2 59436435 59441747 - Wdsub1 protein_coding processed_transcript MGP_129S1SvImJ_T0054892.1 MGP_129S1SvImJ_G0025757.1 mouse_genomes_project 2 59440067 59445987 - MGP_129S1SvImJ_P0054892 Wdsub1 protein_coding protein_coding MGP_129S1SvImJ_T0054893.1 MGP_129S1SvImJ_G0025757.1 mouse_genomes_project 2 59440068 59445975 - MGP_129S1SvImJ_P0054893 Wdsub1 protein_coding protein_coding MGP_129S1SvImJ_T0054894.1 MGP_129S1SvImJ_G0025757.1 mouse_genomes_project 2 59441732 59445992 - Wdsub1 protein_coding processed_transcript MGP_129S1SvImJ_T0056639.1 MGP_129S1SvImJ_G0026254.1 mouse_genomes_project 2 113672512 113673424 - MGP_129S1SvImJ_P0056639 Olfr1277 protein_coding protein_coding MGP_129S1SvImJ_T0004129.1 MGP_129S1SvImJ_G0003653.1 mouse_genomes_project 2 147783304 147821630 - Pcsk2os2 antisense antisense MGP_129S1SvImJ_T0004130.1 MGP_129S1SvImJ_G0003653.1 mouse_genomes_project 2 147784885 147828409 - Pcsk2os2 antisense antisense MGP_129S1SvImJ_T0058266.1 MGP_129S1SvImJ_G0026647.1 mouse_genomes_project 2 156419925 156454914 + MGP_129S1SvImJ_P0058266 Angpt4 protein_coding protein_coding MGP_129S1SvImJ_T0013683.1 MGP_129S1SvImJ_G0011772.1 mouse_genomes_project 2 95931528 95932125 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102376.1 MGP_129S1SvImJ_G0040210.1 mouse_genomes_project 2 9341495 9351718 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0055185.1 MGP_129S1SvImJ_G0025810.1 mouse_genomes_project 2 70049582 70466771 + MGP_129S1SvImJ_P0055185 Myo3b protein_coding protein_coding MGP_129S1SvImJ_T0055186.1 MGP_129S1SvImJ_G0025810.1 mouse_genomes_project 2 70093664 70466774 + MGP_129S1SvImJ_P0055186 Myo3b protein_coding protein_coding MGP_129S1SvImJ_T0055187.1 MGP_129S1SvImJ_G0025810.1 mouse_genomes_project 2 70110420 70203804 + MGP_129S1SvImJ_P0055187 Myo3b protein_coding protein_coding MGP_129S1SvImJ_T0058233.1 MGP_129S1SvImJ_G0026640.1 mouse_genomes_project 2 156028067 156047270 + MGP_129S1SvImJ_P0058233 Fkbp1a protein_coding protein_coding MGP_129S1SvImJ_T0058234.1 MGP_129S1SvImJ_G0026640.1 mouse_genomes_project 2 156028169 156046406 + Fkbp1a protein_coding processed_transcript MGP_129S1SvImJ_T0058235.1 MGP_129S1SvImJ_G0026640.1 mouse_genomes_project 2 156028178 156045198 + Fkbp1a protein_coding processed_transcript MGP_129S1SvImJ_T0058236.1 MGP_129S1SvImJ_G0026640.1 mouse_genomes_project 2 156028178 156030262 + Fkbp1a protein_coding retained_intron MGP_129S1SvImJ_T0058237.1 MGP_129S1SvImJ_G0026640.1 mouse_genomes_project 2 156028199 156045406 + Fkbp1a protein_coding retained_intron MGP_129S1SvImJ_T0058238.1 MGP_129S1SvImJ_G0026640.1 mouse_genomes_project 2 156028205 156046520 + Fkbp1a protein_coding processed_transcript MGP_129S1SvImJ_T0058239.1 MGP_129S1SvImJ_G0026640.1 mouse_genomes_project 2 156028280 156043060 + Fkbp1a protein_coding processed_transcript MGP_129S1SvImJ_T0058240.1 MGP_129S1SvImJ_G0026640.1 mouse_genomes_project 2 156028321 156046231 + Fkbp1a protein_coding processed_transcript MGP_129S1SvImJ_T0058241.1 MGP_129S1SvImJ_G0026640.1 mouse_genomes_project 2 156029483 156047268 + MGP_129S1SvImJ_P0058241 Fkbp1a protein_coding protein_coding MGP_129S1SvImJ_T0058242.1 MGP_129S1SvImJ_G0026640.1 mouse_genomes_project 2 156030994 156046291 + Fkbp1a protein_coding processed_transcript MGP_129S1SvImJ_T0059219.1 MGP_129S1SvImJ_G0026880.1 mouse_genomes_project 2 170348500 170367597 - MGP_129S1SvImJ_P0059219 Pltp protein_coding protein_coding MGP_129S1SvImJ_T0059220.1 MGP_129S1SvImJ_G0026880.1 mouse_genomes_project 2 170348500 170367675 - MGP_129S1SvImJ_P0059220 Pltp protein_coding protein_coding MGP_129S1SvImJ_T0059221.1 MGP_129S1SvImJ_G0026880.1 mouse_genomes_project 2 170348500 170367506 - MGP_129S1SvImJ_P0059221 Pltp protein_coding protein_coding MGP_129S1SvImJ_T0059222.1 MGP_129S1SvImJ_G0026880.1 mouse_genomes_project 2 170356814 170366760 - Pltp protein_coding retained_intron MGP_129S1SvImJ_T0059223.1 MGP_129S1SvImJ_G0026880.1 mouse_genomes_project 2 170362447 170367590 - Pltp protein_coding processed_transcript MGP_129S1SvImJ_T0059224.1 MGP_129S1SvImJ_G0026880.1 mouse_genomes_project 2 170362584 170367584 - MGP_129S1SvImJ_P0059224 Pltp protein_coding protein_coding MGP_129S1SvImJ_T0059225.1 MGP_129S1SvImJ_G0026880.1 mouse_genomes_project 2 170364279 170367594 - MGP_129S1SvImJ_P0059225 Pltp protein_coding protein_coding MGP_129S1SvImJ_T0052307.1 MGP_129S1SvImJ_G0025303.1 mouse_genomes_project 2 240328 290744 + MGP_129S1SvImJ_P0052307 Nmt2 protein_coding protein_coding MGP_129S1SvImJ_T0052308.1 MGP_129S1SvImJ_G0025303.1 mouse_genomes_project 2 240352 269118 + Nmt2 protein_coding processed_transcript MGP_129S1SvImJ_T0052309.1 MGP_129S1SvImJ_G0025303.1 mouse_genomes_project 2 240368 292894 + MGP_129S1SvImJ_P0052309 Nmt2 protein_coding protein_coding MGP_129S1SvImJ_T0013793.1 MGP_129S1SvImJ_G0011882.1 mouse_genomes_project 2 143268791 143269300 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013695.1 MGP_129S1SvImJ_G0011784.1 mouse_genomes_project 2 102091427 102091683 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100921.1 MGP_129S1SvImJ_G0038988.1 mouse_genomes_project 2 24611747 24611879 - Snora17 snoRNA snoRNA MGP_129S1SvImJ_T0017905.1 MGP_129S1SvImJ_G0015471.1 mouse_genomes_project 2 134006791 134027799 - 4930473A02Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0059199.1 MGP_129S1SvImJ_G0026877.1 mouse_genomes_project 2 170329033 170331173 - Spata25 protein_coding processed_transcript MGP_129S1SvImJ_T0059200.1 MGP_129S1SvImJ_G0026877.1 mouse_genomes_project 2 170330026 170331182 - MGP_129S1SvImJ_P0059200 Spata25 protein_coding protein_coding MGP_129S1SvImJ_T0054521.1 MGP_129S1SvImJ_G0025694.1 mouse_genomes_project 2 36116064 36121484 - MGP_129S1SvImJ_P0054521 Zbtb6 protein_coding protein_coding MGP_129S1SvImJ_T0054522.1 MGP_129S1SvImJ_G0025694.1 mouse_genomes_project 2 36116067 36133731 - MGP_129S1SvImJ_P0054522 Zbtb6 protein_coding protein_coding MGP_129S1SvImJ_T0055874.1 MGP_129S1SvImJ_G0026068.1 mouse_genomes_project 2 89979130 89980060 + MGP_129S1SvImJ_P0055874 Olfr1202 protein_coding protein_coding MGP_129S1SvImJ_T0101677.1 MGP_129S1SvImJ_G0039698.1 mouse_genomes_project 2 154738831 154739511 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101678.1 MGP_129S1SvImJ_G0039698.1 mouse_genomes_project 2 154739064 154739820 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0055575.1 MGP_129S1SvImJ_G0025890.1 mouse_genomes_project 2 83601691 83669587 + MGP_129S1SvImJ_P0055575 Fsip2 protein_coding protein_coding MGP_129S1SvImJ_T0055576.1 MGP_129S1SvImJ_G0025890.1 mouse_genomes_project 2 83607557 83623350 + MGP_129S1SvImJ_P0055576 Fsip2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055577.1 MGP_129S1SvImJ_G0025890.1 mouse_genomes_project 2 83640702 83669587 + MGP_129S1SvImJ_P0055577 Fsip2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0013879.1 MGP_129S1SvImJ_G0011968.1 mouse_genomes_project 2 172703387 172707770 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013647.1 MGP_129S1SvImJ_G0011736.1 mouse_genomes_project 2 84814286 84815111 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057697.1 MGP_129S1SvImJ_G0026513.1 mouse_genomes_project 2 134127040 134127783 - Ddrgk1 protein_coding retained_intron MGP_129S1SvImJ_T0057698.1 MGP_129S1SvImJ_G0026513.1 mouse_genomes_project 2 134127161 134137565 - MGP_129S1SvImJ_P0057698 Ddrgk1 protein_coding protein_coding MGP_129S1SvImJ_T0057699.1 MGP_129S1SvImJ_G0026513.1 mouse_genomes_project 2 134127200 134130357 - Ddrgk1 protein_coding processed_transcript MGP_129S1SvImJ_T0057700.1 MGP_129S1SvImJ_G0026513.1 mouse_genomes_project 2 134127296 134134741 - MGP_129S1SvImJ_P0057700 Ddrgk1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057701.1 MGP_129S1SvImJ_G0026513.1 mouse_genomes_project 2 134128204 134136819 - Ddrgk1 protein_coding processed_transcript MGP_129S1SvImJ_T0057457.1 MGP_129S1SvImJ_G0026449.1 mouse_genomes_project 2 130356527 130391346 - MGP_129S1SvImJ_P0057457 Ncaph protein_coding protein_coding MGP_129S1SvImJ_T0057458.1 MGP_129S1SvImJ_G0026449.1 mouse_genomes_project 2 130356545 130368596 - Ncaph protein_coding retained_intron MGP_129S1SvImJ_T0057459.1 MGP_129S1SvImJ_G0026449.1 mouse_genomes_project 2 130356668 130391294 - MGP_129S1SvImJ_P0057459 Ncaph protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057460.1 MGP_129S1SvImJ_G0026449.1 mouse_genomes_project 2 130361298 130372012 - Ncaph protein_coding retained_intron MGP_129S1SvImJ_T0057461.1 MGP_129S1SvImJ_G0026449.1 mouse_genomes_project 2 130378304 130379442 - Ncaph protein_coding retained_intron MGP_129S1SvImJ_T0057462.1 MGP_129S1SvImJ_G0026449.1 mouse_genomes_project 2 130385052 130391289 - Ncaph protein_coding processed_transcript MGP_129S1SvImJ_T0059113.1 MGP_129S1SvImJ_G0026843.1 mouse_genomes_project 2 169642759 169645039 - MGP_129S1SvImJ_P0059113 protein_coding protein_coding MGP_129S1SvImJ_T0007263.1 MGP_129S1SvImJ_G0005959.1 mouse_genomes_project 2 92554515 92555722 + A330069E16Rik lincRNA lincRNA MGP_129S1SvImJ_T0102427.1 MGP_129S1SvImJ_G0040261.1 mouse_genomes_project 2 89616870 89617782 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0055300.1 MGP_129S1SvImJ_G0025830.1 mouse_genomes_project 2 72665840 72676224 + MGP_129S1SvImJ_P0055300 Cdca7 protein_coding protein_coding MGP_129S1SvImJ_T0055301.1 MGP_129S1SvImJ_G0025830.1 mouse_genomes_project 2 72665934 72672179 + MGP_129S1SvImJ_P0055301 Cdca7 protein_coding protein_coding MGP_129S1SvImJ_T0055302.1 MGP_129S1SvImJ_G0025830.1 mouse_genomes_project 2 72666071 72671542 + Cdca7 protein_coding processed_transcript MGP_129S1SvImJ_T0055303.1 MGP_129S1SvImJ_G0025830.1 mouse_genomes_project 2 72673245 72674425 + Cdca7 protein_coding processed_transcript MGP_129S1SvImJ_T0055304.1 MGP_129S1SvImJ_G0025830.1 mouse_genomes_project 2 72674788 72675884 + Cdca7 protein_coding processed_transcript MGP_129S1SvImJ_T0058310.1 MGP_129S1SvImJ_G0026663.1 mouse_genomes_project 2 157047373 157051823 - MGP_129S1SvImJ_P0058310 Defb22 protein_coding protein_coding MGP_129S1SvImJ_T0057422.1 MGP_129S1SvImJ_G0026443.1 mouse_genomes_project 2 129940670 129997150 + Usp8 protein_coding processed_transcript MGP_129S1SvImJ_T0057423.1 MGP_129S1SvImJ_G0026443.1 mouse_genomes_project 2 129940685 129997199 + MGP_129S1SvImJ_P0057423 Usp8 protein_coding protein_coding MGP_129S1SvImJ_T0057424.1 MGP_129S1SvImJ_G0026443.1 mouse_genomes_project 2 129940702 129997192 + MGP_129S1SvImJ_P0057424 Usp8 protein_coding protein_coding MGP_129S1SvImJ_T0013617.1 MGP_129S1SvImJ_G0011706.1 mouse_genomes_project 2 76202854 76203620 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055793.1 MGP_129S1SvImJ_G0025999.1 mouse_genomes_project 2 88146376 88147315 - MGP_129S1SvImJ_P0055793 Olfr1111 protein_coding protein_coding MGP_129S1SvImJ_T0055792.1 MGP_129S1SvImJ_G0025998.1 mouse_genomes_project 2 88131480 88132419 - MGP_129S1SvImJ_P0055792 Olfr1110 protein_coding protein_coding MGP_129S1SvImJ_T0056867.1 MGP_129S1SvImJ_G0026333.1 mouse_genomes_project 2 121902796 121907094 + MGP_129S1SvImJ_P0056867 Gchfr protein_coding protein_coding MGP_129S1SvImJ_T0054492.1 MGP_129S1SvImJ_G0025676.1 mouse_genomes_project 2 35527475 35528414 + MGP_129S1SvImJ_P0054492 Olfr350 protein_coding protein_coding MGP_129S1SvImJ_T0013481.1 MGP_129S1SvImJ_G0011570.1 mouse_genomes_project 2 24516869 24517438 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007268.1 MGP_129S1SvImJ_G0005964.1 mouse_genomes_project 2 93968075 93979402 - Gm13817 lincRNA lincRNA MGP_129S1SvImJ_T0055508.1 MGP_129S1SvImJ_G0025875.1 mouse_genomes_project 2 79358576 79362559 + MGP_129S1SvImJ_P0055508 Ube2e3 protein_coding protein_coding MGP_129S1SvImJ_T0055509.1 MGP_129S1SvImJ_G0025875.1 mouse_genomes_project 2 79358670 79412156 + MGP_129S1SvImJ_P0055509 Ube2e3 protein_coding protein_coding MGP_129S1SvImJ_T0055510.1 MGP_129S1SvImJ_G0025875.1 mouse_genomes_project 2 79360995 79420022 + MGP_129S1SvImJ_P0055510 Ube2e3 protein_coding protein_coding MGP_129S1SvImJ_T0055511.1 MGP_129S1SvImJ_G0025875.1 mouse_genomes_project 2 79361188 79412968 + Ube2e3 protein_coding retained_intron MGP_129S1SvImJ_T0055512.1 MGP_129S1SvImJ_G0025875.1 mouse_genomes_project 2 79361282 79364740 + Ube2e3 protein_coding retained_intron MGP_129S1SvImJ_T0055513.1 MGP_129S1SvImJ_G0025875.1 mouse_genomes_project 2 79361630 79418693 + MGP_129S1SvImJ_P0055513 Ube2e3 protein_coding protein_coding MGP_129S1SvImJ_T0055514.1 MGP_129S1SvImJ_G0025875.1 mouse_genomes_project 2 79416793 79418448 + Ube2e3 protein_coding retained_intron MGP_129S1SvImJ_T0013440.1 MGP_129S1SvImJ_G0011529.1 mouse_genomes_project 2 9869684 9870084 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055967.1 MGP_129S1SvImJ_G0026131.1 mouse_genomes_project 2 92016815 92055372 + MGP_129S1SvImJ_P0055967 Fnbp4 protein_coding protein_coding MGP_129S1SvImJ_T0055968.1 MGP_129S1SvImJ_G0026131.1 mouse_genomes_project 2 92017049 92050820 + Fnbp4 protein_coding processed_transcript MGP_129S1SvImJ_T0055969.1 MGP_129S1SvImJ_G0026131.1 mouse_genomes_project 2 92025243 92031764 + Fnbp4 protein_coding processed_transcript MGP_129S1SvImJ_T0055970.1 MGP_129S1SvImJ_G0026131.1 mouse_genomes_project 2 92031913 92038115 + Fnbp4 protein_coding processed_transcript MGP_129S1SvImJ_T0055971.1 MGP_129S1SvImJ_G0026131.1 mouse_genomes_project 2 92032716 92042187 + Fnbp4 protein_coding processed_transcript MGP_129S1SvImJ_T0055972.1 MGP_129S1SvImJ_G0026131.1 mouse_genomes_project 2 92037802 92042408 + Fnbp4 protein_coding processed_transcript MGP_129S1SvImJ_T0055973.1 MGP_129S1SvImJ_G0026131.1 mouse_genomes_project 2 92042436 92050714 + Fnbp4 protein_coding processed_transcript MGP_129S1SvImJ_T0055974.1 MGP_129S1SvImJ_G0026131.1 mouse_genomes_project 2 92042993 92050803 + Fnbp4 protein_coding processed_transcript MGP_129S1SvImJ_T0055975.1 MGP_129S1SvImJ_G0026131.1 mouse_genomes_project 2 92049887 92050711 + Fnbp4 protein_coding processed_transcript MGP_129S1SvImJ_T0054276.1 MGP_129S1SvImJ_G0025631.1 mouse_genomes_project 2 31644143 31888937 - MGP_129S1SvImJ_P0054276 Ralgps1 protein_coding protein_coding MGP_129S1SvImJ_T0054277.1 MGP_129S1SvImJ_G0025631.1 mouse_genomes_project 2 31644147 31888937 - MGP_129S1SvImJ_P0054277 Ralgps1 protein_coding protein_coding MGP_129S1SvImJ_T0054278.1 MGP_129S1SvImJ_G0025631.1 mouse_genomes_project 2 31644147 31888937 - MGP_129S1SvImJ_P0054278 Ralgps1 protein_coding protein_coding MGP_129S1SvImJ_T0054279.1 MGP_129S1SvImJ_G0025631.1 mouse_genomes_project 2 31647699 31888937 - MGP_129S1SvImJ_P0054279 Ralgps1 protein_coding protein_coding MGP_129S1SvImJ_T0054280.1 MGP_129S1SvImJ_G0025631.1 mouse_genomes_project 2 31654033 31668917 - Ralgps1 protein_coding processed_transcript MGP_129S1SvImJ_T0054285.1 MGP_129S1SvImJ_G0025631.1 mouse_genomes_project 2 31774599 31888937 - Ralgps1 protein_coding retained_intron MGP_129S1SvImJ_T0053322.1 MGP_129S1SvImJ_G0025484.1 mouse_genomes_project 2 24300430 24308083 - MGP_129S1SvImJ_P0053322 Card9 protein_coding protein_coding MGP_129S1SvImJ_T0053323.1 MGP_129S1SvImJ_G0025484.1 mouse_genomes_project 2 24300441 24301042 - Card9 protein_coding processed_transcript MGP_129S1SvImJ_T0053324.1 MGP_129S1SvImJ_G0025484.1 mouse_genomes_project 2 24300441 24309254 - MGP_129S1SvImJ_P0053324 Card9 protein_coding protein_coding MGP_129S1SvImJ_T0004011.1 MGP_129S1SvImJ_G0003576.1 mouse_genomes_project 2 67178088 67268723 - Gm13599 antisense antisense MGP_129S1SvImJ_T0102440.1 MGP_129S1SvImJ_G0040274.1 mouse_genomes_project 2 125032690 125035044 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0001078.1 MGP_129S1SvImJ_G0001007.1 mouse_genomes_project 2 13102707 13104449 + TEC TEC MGP_129S1SvImJ_T0013673.1 MGP_129S1SvImJ_G0011762.1 mouse_genomes_project 2 92680155 92680323 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013888.1 MGP_129S1SvImJ_G0011977.1 mouse_genomes_project 2 176514576 176514882 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013871.1 MGP_129S1SvImJ_G0011960.1 mouse_genomes_project 2 168184616 168185306 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059176.1 MGP_129S1SvImJ_G0026870.1 mouse_genomes_project 2 170240462 170266516 + MGP_129S1SvImJ_P0059176 Dnttip1 protein_coding protein_coding MGP_129S1SvImJ_T0059177.1 MGP_129S1SvImJ_G0026870.1 mouse_genomes_project 2 170240493 170245932 + MGP_129S1SvImJ_P0059177 Dnttip1 protein_coding protein_coding MGP_129S1SvImJ_T0059178.1 MGP_129S1SvImJ_G0026870.1 mouse_genomes_project 2 170240510 170258290 + MGP_129S1SvImJ_P0059178 Dnttip1 protein_coding protein_coding MGP_129S1SvImJ_T0059179.1 MGP_129S1SvImJ_G0026870.1 mouse_genomes_project 2 170250902 170256289 + Dnttip1 protein_coding retained_intron MGP_129S1SvImJ_T0017822.1 MGP_129S1SvImJ_G0015430.1 mouse_genomes_project 2 76071062 76078034 + E030042O20Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0056654.1 MGP_129S1SvImJ_G0026269.1 mouse_genomes_project 2 114113764 114114703 - MGP_129S1SvImJ_P0056654 protein_coding protein_coding MGP_129S1SvImJ_T0057089.1 MGP_129S1SvImJ_G0026374.1 mouse_genomes_project 2 123607954 123717260 - MGP_129S1SvImJ_P0057089 Ttbk2 protein_coding protein_coding MGP_129S1SvImJ_T0057090.1 MGP_129S1SvImJ_G0026374.1 mouse_genomes_project 2 123607954 123717062 - MGP_129S1SvImJ_P0057090 Ttbk2 protein_coding protein_coding MGP_129S1SvImJ_T0057091.1 MGP_129S1SvImJ_G0026374.1 mouse_genomes_project 2 123607954 123717074 - MGP_129S1SvImJ_P0057091 Ttbk2 protein_coding protein_coding MGP_129S1SvImJ_T0057092.1 MGP_129S1SvImJ_G0026374.1 mouse_genomes_project 2 123620801 123717046 - MGP_129S1SvImJ_P0057092 Ttbk2 protein_coding protein_coding MGP_129S1SvImJ_T0057093.1 MGP_129S1SvImJ_G0026374.1 mouse_genomes_project 2 123626024 123717020 - MGP_129S1SvImJ_P0057093 Ttbk2 protein_coding protein_coding MGP_129S1SvImJ_T0057094.1 MGP_129S1SvImJ_G0026374.1 mouse_genomes_project 2 123668338 123717091 - Ttbk2 protein_coding processed_transcript MGP_129S1SvImJ_T0055904.1 MGP_129S1SvImJ_G0026094.1 mouse_genomes_project 2 90543037 90543982 - MGP_129S1SvImJ_P0055904 Olfr1234 protein_coding protein_coding MGP_129S1SvImJ_T0055905.1 MGP_129S1SvImJ_G0026094.1 mouse_genomes_project 2 90543037 90545416 - MGP_129S1SvImJ_P0055905 Olfr1234 protein_coding protein_coding MGP_129S1SvImJ_T0055906.1 MGP_129S1SvImJ_G0026094.1 mouse_genomes_project 2 90544118 90545420 - Olfr1234 protein_coding processed_transcript MGP_129S1SvImJ_T0004120.1 MGP_129S1SvImJ_G0003647.1 mouse_genomes_project 2 139032177 139305231 - 9630028H03Rik antisense antisense MGP_129S1SvImJ_T0004121.1 MGP_129S1SvImJ_G0003647.1 mouse_genomes_project 2 139302176 139304943 - 9630028H03Rik antisense antisense MGP_129S1SvImJ_T0056894.1 MGP_129S1SvImJ_G0026341.1 mouse_genomes_project 2 122075528 122087550 + MGP_129S1SvImJ_P0056894 Dll4 protein_coding protein_coding MGP_129S1SvImJ_T0056895.1 MGP_129S1SvImJ_G0026341.1 mouse_genomes_project 2 122078281 122082036 + Dll4 protein_coding processed_transcript MGP_129S1SvImJ_T0001097.1 MGP_129S1SvImJ_G0001026.1 mouse_genomes_project 2 37526137 37526910 - TEC TEC MGP_129S1SvImJ_T0058290.1 MGP_129S1SvImJ_G0026655.1 mouse_genomes_project 2 156844487 156851149 - Rbck1 protein_coding retained_intron MGP_129S1SvImJ_T0058291.1 MGP_129S1SvImJ_G0026655.1 mouse_genomes_project 2 156844487 156860575 - MGP_129S1SvImJ_P0058291 Rbck1 protein_coding protein_coding MGP_129S1SvImJ_T0058292.1 MGP_129S1SvImJ_G0026655.1 mouse_genomes_project 2 156844487 156860816 - MGP_129S1SvImJ_P0058292 Rbck1 protein_coding protein_coding MGP_129S1SvImJ_T0058293.1 MGP_129S1SvImJ_G0026655.1 mouse_genomes_project 2 156846462 156851650 - Rbck1 protein_coding retained_intron MGP_129S1SvImJ_T0058294.1 MGP_129S1SvImJ_G0026655.1 mouse_genomes_project 2 156846930 156852516 - MGP_129S1SvImJ_P0058294 Rbck1 protein_coding protein_coding MGP_129S1SvImJ_T0058295.1 MGP_129S1SvImJ_G0026655.1 mouse_genomes_project 2 156851089 156852768 - Rbck1 protein_coding retained_intron MGP_129S1SvImJ_T0058296.1 MGP_129S1SvImJ_G0026655.1 mouse_genomes_project 2 156852691 156855914 - Rbck1 protein_coding processed_transcript MGP_129S1SvImJ_T0058297.1 MGP_129S1SvImJ_G0026655.1 mouse_genomes_project 2 156854560 156860547 - Rbck1 protein_coding processed_transcript MGP_129S1SvImJ_T0055165.1 MGP_129S1SvImJ_G0025807.1 mouse_genomes_project 2 69858270 69868490 + MGP_129S1SvImJ_P0055165 Ssb protein_coding protein_coding MGP_129S1SvImJ_T0055166.1 MGP_129S1SvImJ_G0025807.1 mouse_genomes_project 2 69858270 69868550 + MGP_129S1SvImJ_P0055166 Ssb protein_coding protein_coding MGP_129S1SvImJ_T0055167.1 MGP_129S1SvImJ_G0025807.1 mouse_genomes_project 2 69858331 69868214 + MGP_129S1SvImJ_P0055167 Ssb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055168.1 MGP_129S1SvImJ_G0025807.1 mouse_genomes_project 2 69858394 69864256 + MGP_129S1SvImJ_P0055168 Ssb protein_coding protein_coding MGP_129S1SvImJ_T0055169.1 MGP_129S1SvImJ_G0025807.1 mouse_genomes_project 2 69859994 69865854 + Ssb protein_coding processed_transcript MGP_129S1SvImJ_T0055170.1 MGP_129S1SvImJ_G0025807.1 mouse_genomes_project 2 69865482 69868214 + MGP_129S1SvImJ_P0055170 Ssb protein_coding protein_coding MGP_129S1SvImJ_T0052930.1 MGP_129S1SvImJ_G0025411.1 mouse_genomes_project 2 22422818 22593091 - MGP_129S1SvImJ_P0052930 Cacna1b protein_coding protein_coding MGP_129S1SvImJ_T0052931.1 MGP_129S1SvImJ_G0025411.1 mouse_genomes_project 2 22422825 22593068 - MGP_129S1SvImJ_P0052931 Cacna1b protein_coding protein_coding MGP_129S1SvImJ_T0052932.1 MGP_129S1SvImJ_G0025411.1 mouse_genomes_project 2 22425306 22592986 - MGP_129S1SvImJ_P0052932 Cacna1b protein_coding protein_coding MGP_129S1SvImJ_T0052933.1 MGP_129S1SvImJ_G0025411.1 mouse_genomes_project 2 22425310 22426466 - MGP_129S1SvImJ_P0052933 Cacna1b protein_coding protein_coding MGP_129S1SvImJ_T0052934.1 MGP_129S1SvImJ_G0025411.1 mouse_genomes_project 2 22425501 22592986 - MGP_129S1SvImJ_P0052934 Cacna1b protein_coding protein_coding MGP_129S1SvImJ_T0052935.1 MGP_129S1SvImJ_G0025411.1 mouse_genomes_project 2 22425501 22592986 - MGP_129S1SvImJ_P0052935 Cacna1b protein_coding protein_coding MGP_129S1SvImJ_T0052936.1 MGP_129S1SvImJ_G0025411.1 mouse_genomes_project 2 22426922 22437253 - MGP_129S1SvImJ_P0052936 Cacna1b protein_coding protein_coding MGP_129S1SvImJ_T0052937.1 MGP_129S1SvImJ_G0025411.1 mouse_genomes_project 2 22428863 22457348 - MGP_129S1SvImJ_P0052937 Cacna1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052938.1 MGP_129S1SvImJ_G0025411.1 mouse_genomes_project 2 22441510 22450866 - MGP_129S1SvImJ_P0052938 Cacna1b protein_coding protein_coding MGP_129S1SvImJ_T0052939.1 MGP_129S1SvImJ_G0025411.1 mouse_genomes_project 2 22507182 22513551 - MGP_129S1SvImJ_P0052939 Cacna1b protein_coding protein_coding MGP_129S1SvImJ_T0055815.1 MGP_129S1SvImJ_G0026013.1 mouse_genomes_project 2 88666815 88667828 + MGP_129S1SvImJ_P0055815 Olfr1130 protein_coding protein_coding MGP_129S1SvImJ_T0001094.1 MGP_129S1SvImJ_G0001023.1 mouse_genomes_project 2 36830948 36833815 - TEC TEC MGP_129S1SvImJ_T0053561.1 MGP_129S1SvImJ_G0025527.1 mouse_genomes_project 2 26631750 26651109 - MGP_129S1SvImJ_P0053561 Gtf3c5 protein_coding protein_coding MGP_129S1SvImJ_T0053562.1 MGP_129S1SvImJ_G0025527.1 mouse_genomes_project 2 26631750 26651019 - MGP_129S1SvImJ_P0053562 Gtf3c5 protein_coding protein_coding MGP_129S1SvImJ_T0053563.1 MGP_129S1SvImJ_G0025527.1 mouse_genomes_project 2 26634195 26639194 - Gtf3c5 protein_coding retained_intron MGP_129S1SvImJ_T0053564.1 MGP_129S1SvImJ_G0025527.1 mouse_genomes_project 2 26640252 26641928 - Gtf3c5 protein_coding retained_intron MGP_129S1SvImJ_T0053565.1 MGP_129S1SvImJ_G0025527.1 mouse_genomes_project 2 26647059 26651097 - Gtf3c5 protein_coding retained_intron MGP_129S1SvImJ_T0053566.1 MGP_129S1SvImJ_G0025527.1 mouse_genomes_project 2 26647592 26650818 - MGP_129S1SvImJ_P0053566 Gtf3c5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053567.1 MGP_129S1SvImJ_G0025527.1 mouse_genomes_project 2 26650834 26651581 - Gtf3c5 protein_coding processed_transcript MGP_129S1SvImJ_T0010389.1 MGP_129S1SvImJ_G0008505.1 mouse_genomes_project 2 11775783 11775862 + Mir511 miRNA miRNA MGP_129S1SvImJ_T0059472.1 MGP_129S1SvImJ_G0026928.1 mouse_genomes_project 2 174491373 174627610 - MGP_129S1SvImJ_P0059472 Atp9a protein_coding protein_coding MGP_129S1SvImJ_T0059473.1 MGP_129S1SvImJ_G0026928.1 mouse_genomes_project 2 174491373 174612513 - MGP_129S1SvImJ_P0059473 Atp9a protein_coding protein_coding MGP_129S1SvImJ_T0059474.1 MGP_129S1SvImJ_G0026928.1 mouse_genomes_project 2 174491373 174627433 - MGP_129S1SvImJ_P0059474 Atp9a protein_coding protein_coding MGP_129S1SvImJ_T0059475.1 MGP_129S1SvImJ_G0026928.1 mouse_genomes_project 2 174491373 174620089 - MGP_129S1SvImJ_P0059475 Atp9a protein_coding protein_coding MGP_129S1SvImJ_T0059476.1 MGP_129S1SvImJ_G0026928.1 mouse_genomes_project 2 174491398 174627435 - MGP_129S1SvImJ_P0059476 Atp9a protein_coding protein_coding MGP_129S1SvImJ_T0059477.1 MGP_129S1SvImJ_G0026928.1 mouse_genomes_project 2 174520900 174529995 - Atp9a protein_coding processed_transcript MGP_129S1SvImJ_T0059478.1 MGP_129S1SvImJ_G0026928.1 mouse_genomes_project 2 174526663 174620089 - Atp9a protein_coding retained_intron MGP_129S1SvImJ_T0059479.1 MGP_129S1SvImJ_G0026928.1 mouse_genomes_project 2 174556534 174627852 - MGP_129S1SvImJ_P0059479 Atp9a protein_coding protein_coding MGP_129S1SvImJ_T0059480.1 MGP_129S1SvImJ_G0026928.1 mouse_genomes_project 2 174556542 174627886 - MGP_129S1SvImJ_P0059480 Atp9a protein_coding protein_coding MGP_129S1SvImJ_T0059481.1 MGP_129S1SvImJ_G0026928.1 mouse_genomes_project 2 174576169 174590206 - MGP_129S1SvImJ_P0059481 Atp9a protein_coding protein_coding MGP_129S1SvImJ_T0059482.1 MGP_129S1SvImJ_G0026928.1 mouse_genomes_project 2 174576236 174590255 - MGP_129S1SvImJ_P0059482 Atp9a protein_coding protein_coding MGP_129S1SvImJ_T0056730.1 MGP_129S1SvImJ_G0026304.1 mouse_genomes_project 2 116989428 117141331 - MGP_129S1SvImJ_P0056730 Dph6 protein_coding protein_coding MGP_129S1SvImJ_T0056731.1 MGP_129S1SvImJ_G0026304.1 mouse_genomes_project 2 116991721 117021259 - Dph6 protein_coding processed_transcript MGP_129S1SvImJ_T0056732.1 MGP_129S1SvImJ_G0026304.1 mouse_genomes_project 2 116991815 117141297 - MGP_129S1SvImJ_P0056732 Dph6 protein_coding protein_coding MGP_129S1SvImJ_T0056733.1 MGP_129S1SvImJ_G0026304.1 mouse_genomes_project 2 116994803 117141408 - Dph6 protein_coding retained_intron MGP_129S1SvImJ_T0056734.1 MGP_129S1SvImJ_G0026304.1 mouse_genomes_project 2 117129129 117141349 - Dph6 protein_coding retained_intron MGP_129S1SvImJ_T0056657.1 MGP_129S1SvImJ_G0026272.1 mouse_genomes_project 2 114239276 114240224 + MGP_129S1SvImJ_P0056657 Olfr1302 protein_coding protein_coding MGP_129S1SvImJ_T0010354.1 MGP_129S1SvImJ_G0008470.1 mouse_genomes_project 2 7823832 7823951 + Mir669e miRNA miRNA MGP_129S1SvImJ_T0007212.1 MGP_129S1SvImJ_G0005916.1 mouse_genomes_project 2 52229841 52233627 - Gm26603 lincRNA lincRNA MGP_129S1SvImJ_T0013895.1 MGP_129S1SvImJ_G0011984.1 mouse_genomes_project 2 180963429 180964002 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013719.1 MGP_129S1SvImJ_G0011808.1 mouse_genomes_project 2 109148100 109148568 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007409.1 MGP_129S1SvImJ_G0006078.1 mouse_genomes_project 2 173556256 173557718 + 9230111E07Rik lincRNA lincRNA MGP_129S1SvImJ_T0055725.1 MGP_129S1SvImJ_G0025934.1 mouse_genomes_project 2 86501330 86502275 + MGP_129S1SvImJ_P0055725 Olfr1009 protein_coding protein_coding MGP_129S1SvImJ_T0057108.1 MGP_129S1SvImJ_G0026377.1 mouse_genomes_project 2 123885128 123891824 + MGP_129S1SvImJ_P0057108 Ccndbp1 protein_coding protein_coding MGP_129S1SvImJ_T0057109.1 MGP_129S1SvImJ_G0026377.1 mouse_genomes_project 2 123885163 123889640 + Ccndbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0057110.1 MGP_129S1SvImJ_G0026377.1 mouse_genomes_project 2 123885168 123893201 + MGP_129S1SvImJ_P0057110 Ccndbp1 protein_coding protein_coding MGP_129S1SvImJ_T0057111.1 MGP_129S1SvImJ_G0026377.1 mouse_genomes_project 2 123885206 123893585 + MGP_129S1SvImJ_P0057111 Ccndbp1 protein_coding protein_coding MGP_129S1SvImJ_T0057112.1 MGP_129S1SvImJ_G0026377.1 mouse_genomes_project 2 123885400 123887271 + Ccndbp1 protein_coding retained_intron MGP_129S1SvImJ_T0057113.1 MGP_129S1SvImJ_G0026377.1 mouse_genomes_project 2 123887746 123888448 + Ccndbp1 protein_coding retained_intron MGP_129S1SvImJ_T0057114.1 MGP_129S1SvImJ_G0026377.1 mouse_genomes_project 2 123889182 123889652 + Ccndbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0013725.1 MGP_129S1SvImJ_G0011814.1 mouse_genomes_project 2 110863752 110864012 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007175.1 MGP_129S1SvImJ_G0005886.1 mouse_genomes_project 2 26349322 26359934 - Gm13373 lincRNA lincRNA MGP_129S1SvImJ_T0013855.1 MGP_129S1SvImJ_G0011944.1 mouse_genomes_project 2 161782034 161791479 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054828.1 MGP_129S1SvImJ_G0025747.1 mouse_genomes_project 2 57666281 57701727 - MGP_129S1SvImJ_P0054828 Cytip protein_coding protein_coding MGP_129S1SvImJ_T0054829.1 MGP_129S1SvImJ_G0025747.1 mouse_genomes_project 2 57671340 57739222 - Cytip protein_coding processed_transcript MGP_129S1SvImJ_T0054830.1 MGP_129S1SvImJ_G0025747.1 mouse_genomes_project 2 57671425 57739232 - Cytip protein_coding processed_transcript MGP_129S1SvImJ_T0054831.1 MGP_129S1SvImJ_G0025747.1 mouse_genomes_project 2 57671557 57698018 - Cytip protein_coding processed_transcript MGP_129S1SvImJ_T0054832.1 MGP_129S1SvImJ_G0025747.1 mouse_genomes_project 2 57686032 57701353 - Cytip protein_coding processed_transcript MGP_129S1SvImJ_T0054833.1 MGP_129S1SvImJ_G0025747.1 mouse_genomes_project 2 57686207 57739233 - Cytip protein_coding processed_transcript MGP_129S1SvImJ_T0054834.1 MGP_129S1SvImJ_G0025747.1 mouse_genomes_project 2 57701209 57739237 - Cytip protein_coding processed_transcript MGP_129S1SvImJ_T0054835.1 MGP_129S1SvImJ_G0025747.1 mouse_genomes_project 2 57701270 57701889 - Cytip protein_coding processed_transcript MGP_129S1SvImJ_T0001115.1 MGP_129S1SvImJ_G0001044.1 mouse_genomes_project 2 120712346 120713968 + TEC TEC MGP_129S1SvImJ_T0013796.1 MGP_129S1SvImJ_G0011885.1 mouse_genomes_project 2 144033929 144034310 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017864.1 MGP_129S1SvImJ_G0015455.1 mouse_genomes_project 2 116485706 116543788 + A530058N18Rik processed_transcript antisense MGP_129S1SvImJ_T0017865.1 MGP_129S1SvImJ_G0015455.1 mouse_genomes_project 2 116485710 116537463 + A530058N18Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0056763.1 MGP_129S1SvImJ_G0026309.1 mouse_genomes_project 2 119887988 119898529 + Fam98b protein_coding retained_intron MGP_129S1SvImJ_T0056764.1 MGP_129S1SvImJ_G0026309.1 mouse_genomes_project 2 119887988 119912997 + MGP_129S1SvImJ_P0056764 Fam98b protein_coding protein_coding MGP_129S1SvImJ_T0056765.1 MGP_129S1SvImJ_G0026309.1 mouse_genomes_project 2 119897069 119898527 + Fam98b protein_coding processed_transcript MGP_129S1SvImJ_T0058977.1 MGP_129S1SvImJ_G0026807.1 mouse_genomes_project 2 165949792 166073712 - Zhx3 protein_coding processed_transcript MGP_129S1SvImJ_T0058985.1 MGP_129S1SvImJ_G0026807.1 mouse_genomes_project 2 165966269 166073286 - MGP_129S1SvImJ_P0058985 Zhx3 protein_coding protein_coding MGP_129S1SvImJ_T0058986.1 MGP_129S1SvImJ_G0026807.1 mouse_genomes_project 2 165966866 166059669 - MGP_129S1SvImJ_P0058986 Zhx3 protein_coding protein_coding MGP_129S1SvImJ_T0058987.1 MGP_129S1SvImJ_G0026807.1 mouse_genomes_project 2 165971553 166073704 - MGP_129S1SvImJ_P0058987 Zhx3 protein_coding protein_coding MGP_129S1SvImJ_T0058988.1 MGP_129S1SvImJ_G0026807.1 mouse_genomes_project 2 165983050 166073543 - MGP_129S1SvImJ_P0058988 Zhx3 protein_coding protein_coding MGP_129S1SvImJ_T0058989.1 MGP_129S1SvImJ_G0026807.1 mouse_genomes_project 2 165983087 166073704 - MGP_129S1SvImJ_P0058989 Zhx3 protein_coding protein_coding MGP_129S1SvImJ_T0017915.1 MGP_129S1SvImJ_G0015476.1 mouse_genomes_project 2 155054561 155058583 + Gm14123 processed_transcript processed_transcript MGP_129S1SvImJ_T0010478.1 MGP_129S1SvImJ_G0008594.1 mouse_genomes_project 2 137226564 137226651 + Mir3090 miRNA miRNA MGP_129S1SvImJ_T0058517.1 MGP_129S1SvImJ_G0026727.1 mouse_genomes_project 2 159655963 159677813 - MGP_129S1SvImJ_P0058517 Eif2s2 protein_coding protein_coding MGP_129S1SvImJ_T0058518.1 MGP_129S1SvImJ_G0026727.1 mouse_genomes_project 2 159667816 159677940 - Eif2s2 protein_coding retained_intron MGP_129S1SvImJ_T0058519.1 MGP_129S1SvImJ_G0026727.1 mouse_genomes_project 2 159667851 159677917 - Eif2s2 protein_coding retained_intron MGP_129S1SvImJ_T0054138.1 MGP_129S1SvImJ_G0025608.1 mouse_genomes_project 2 30910150 30916647 + MGP_129S1SvImJ_P0054138 Naif1 protein_coding protein_coding MGP_129S1SvImJ_T0099659.1 MGP_129S1SvImJ_G0037726.1 mouse_genomes_project 2 22854250 22854357 - Gm25518 snRNA snRNA MGP_129S1SvImJ_T0056675.1 MGP_129S1SvImJ_G0026287.1 mouse_genomes_project 2 114711582 114806437 + MGP_129S1SvImJ_P0056675 protein_coding protein_coding MGP_129S1SvImJ_T0056677.1 MGP_129S1SvImJ_G0026287.1 mouse_genomes_project 2 114712499 114803339 + MGP_129S1SvImJ_P0056677 protein_coding protein_coding MGP_129S1SvImJ_T0056678.1 MGP_129S1SvImJ_G0026287.1 mouse_genomes_project 2 114712576 114810466 + MGP_129S1SvImJ_P0056678 protein_coding protein_coding MGP_129S1SvImJ_T0056679.1 MGP_129S1SvImJ_G0026287.1 mouse_genomes_project 2 114730299 114810466 + MGP_129S1SvImJ_P0056679 protein_coding protein_coding MGP_129S1SvImJ_T0056680.1 MGP_129S1SvImJ_G0026287.1 mouse_genomes_project 2 114794227 114798866 + protein_coding processed_transcript MGP_129S1SvImJ_T0056681.1 MGP_129S1SvImJ_G0026287.1 mouse_genomes_project 2 114799835 114801548 + protein_coding processed_transcript MGP_129S1SvImJ_T0056682.1 MGP_129S1SvImJ_G0026287.1 mouse_genomes_project 2 114801511 114804197 + protein_coding processed_transcript MGP_129S1SvImJ_T0056683.1 MGP_129S1SvImJ_G0026287.1 mouse_genomes_project 2 114803504 114810473 + protein_coding retained_intron MGP_129S1SvImJ_T0010452.1 MGP_129S1SvImJ_G0008568.1 mouse_genomes_project 2 95715396 95715500 - Gm23630 miRNA miRNA MGP_129S1SvImJ_T0052876.1 MGP_129S1SvImJ_G0025396.1 mouse_genomes_project 2 20860989 20902596 - MGP_129S1SvImJ_P0052876 Mastl protein_coding protein_coding MGP_129S1SvImJ_T0052877.1 MGP_129S1SvImJ_G0025396.1 mouse_genomes_project 2 20883275 20902469 - Mastl protein_coding processed_transcript MGP_129S1SvImJ_T0055867.1 MGP_129S1SvImJ_G0026061.1 mouse_genomes_project 2 89834941 89835868 - MGP_129S1SvImJ_P0055867 Olfr1195 protein_coding protein_coding MGP_129S1SvImJ_T0056378.1 MGP_129S1SvImJ_G0026195.1 mouse_genomes_project 2 104204268 104317532 - MGP_129S1SvImJ_P0056378 Trim44 protein_coding protein_coding MGP_129S1SvImJ_T0056379.1 MGP_129S1SvImJ_G0026195.1 mouse_genomes_project 2 104208637 104316889 - MGP_129S1SvImJ_P0056379 Trim44 protein_coding protein_coding MGP_129S1SvImJ_T0056380.1 MGP_129S1SvImJ_G0026195.1 mouse_genomes_project 2 104264496 104324434 - MGP_129S1SvImJ_P0056380 Trim44 protein_coding protein_coding MGP_129S1SvImJ_T0013633.1 MGP_129S1SvImJ_G0011722.1 mouse_genomes_project 2 81196456 81197064 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058437.1 MGP_129S1SvImJ_G0026703.1 mouse_genomes_project 2 158647440 158652084 + Bpifb4 protein_coding retained_intron MGP_129S1SvImJ_T0058438.1 MGP_129S1SvImJ_G0026703.1 mouse_genomes_project 2 158647449 158674758 + MGP_129S1SvImJ_P0058438 Bpifb4 protein_coding protein_coding MGP_129S1SvImJ_T0058439.1 MGP_129S1SvImJ_G0026703.1 mouse_genomes_project 2 158650344 158673333 + MGP_129S1SvImJ_P0058439 Bpifb4 protein_coding protein_coding MGP_129S1SvImJ_T0058440.1 MGP_129S1SvImJ_G0026703.1 mouse_genomes_project 2 158651750 158654319 + Bpifb4 protein_coding retained_intron MGP_129S1SvImJ_T0058441.1 MGP_129S1SvImJ_G0026703.1 mouse_genomes_project 2 158653404 158673333 + MGP_129S1SvImJ_P0058441 Bpifb4 protein_coding protein_coding MGP_129S1SvImJ_T0056668.1 MGP_129S1SvImJ_G0026283.1 mouse_genomes_project 2 114580179 114581020 + MGP_129S1SvImJ_P0056668 Olfr1317 protein_coding protein_coding MGP_129S1SvImJ_T0017851.1 MGP_129S1SvImJ_G0015449.1 mouse_genomes_project 2 105800312 105806621 - 4930547E08Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0055907.1 MGP_129S1SvImJ_G0026095.1 mouse_genomes_project 2 90594674 90595622 - MGP_129S1SvImJ_P0055907 Olfr1238 protein_coding protein_coding MGP_129S1SvImJ_T0058078.1 MGP_129S1SvImJ_G0026595.1 mouse_genomes_project 2 150069025 150084605 + MGP_129S1SvImJ_P0058078 Naa20 protein_coding protein_coding MGP_129S1SvImJ_T0058079.1 MGP_129S1SvImJ_G0026595.1 mouse_genomes_project 2 150069037 150082033 + MGP_129S1SvImJ_P0058079 Naa20 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058080.1 MGP_129S1SvImJ_G0026595.1 mouse_genomes_project 2 150069041 150082039 + MGP_129S1SvImJ_P0058080 Naa20 protein_coding protein_coding MGP_129S1SvImJ_T0058081.1 MGP_129S1SvImJ_G0026595.1 mouse_genomes_project 2 150069046 150082113 + MGP_129S1SvImJ_P0058081 Naa20 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058082.1 MGP_129S1SvImJ_G0026595.1 mouse_genomes_project 2 150069078 150076886 + MGP_129S1SvImJ_P0058082 Naa20 protein_coding protein_coding MGP_129S1SvImJ_T0058083.1 MGP_129S1SvImJ_G0026595.1 mouse_genomes_project 2 150069081 150078480 + Naa20 protein_coding retained_intron MGP_129S1SvImJ_T0058084.1 MGP_129S1SvImJ_G0026595.1 mouse_genomes_project 2 150069094 150082371 + MGP_129S1SvImJ_P0058084 Naa20 protein_coding protein_coding MGP_129S1SvImJ_T0058085.1 MGP_129S1SvImJ_G0026595.1 mouse_genomes_project 2 150078381 150082216 + Naa20 protein_coding retained_intron MGP_129S1SvImJ_T0007424.1 MGP_129S1SvImJ_G0006092.1 mouse_genomes_project 2 175618522 175887760 - lincRNA lincRNA MGP_129S1SvImJ_T0007425.1 MGP_129S1SvImJ_G0006092.1 mouse_genomes_project 2 175618552 175887760 - lincRNA lincRNA MGP_129S1SvImJ_T0054474.1 MGP_129S1SvImJ_G0025663.1 mouse_genomes_project 2 34918574 34940133 + MGP_129S1SvImJ_P0054474 Ptgs1 protein_coding protein_coding MGP_129S1SvImJ_T0054475.1 MGP_129S1SvImJ_G0025663.1 mouse_genomes_project 2 34918704 34925922 + Ptgs1 protein_coding processed_transcript MGP_129S1SvImJ_T0054476.1 MGP_129S1SvImJ_G0025663.1 mouse_genomes_project 2 34924107 34940130 + Ptgs1 protein_coding processed_transcript MGP_129S1SvImJ_T0054477.1 MGP_129S1SvImJ_G0025663.1 mouse_genomes_project 2 34928571 34929327 + Ptgs1 protein_coding retained_intron MGP_129S1SvImJ_T0054478.1 MGP_129S1SvImJ_G0025663.1 mouse_genomes_project 2 34930333 34933064 + Ptgs1 protein_coding retained_intron MGP_129S1SvImJ_T0098570.1 MGP_129S1SvImJ_G0036655.1 mouse_genomes_project 2 124853640 124853754 - Gm23983 rRNA rRNA MGP_129S1SvImJ_T0055730.1 MGP_129S1SvImJ_G0025939.1 mouse_genomes_project 2 86579329 86580259 - MGP_129S1SvImJ_P0055730 Olfr1016 protein_coding protein_coding MGP_129S1SvImJ_T0053672.1 MGP_129S1SvImJ_G0025546.1 mouse_genomes_project 2 28040566 28042758 + MGP_129S1SvImJ_P0053672 Cercam protein_coding protein_coding MGP_129S1SvImJ_T0053673.1 MGP_129S1SvImJ_G0025546.1 mouse_genomes_project 2 28040896 28053948 + MGP_129S1SvImJ_P0053673 Cercam protein_coding protein_coding MGP_129S1SvImJ_T0053674.1 MGP_129S1SvImJ_G0025546.1 mouse_genomes_project 2 28040946 28042712 + MGP_129S1SvImJ_P0053674 Cercam protein_coding protein_coding MGP_129S1SvImJ_T0053675.1 MGP_129S1SvImJ_G0025546.1 mouse_genomes_project 2 28046982 28049498 + Cercam protein_coding retained_intron MGP_129S1SvImJ_T0053676.1 MGP_129S1SvImJ_G0025546.1 mouse_genomes_project 2 28047528 28052031 + Cercam protein_coding retained_intron MGP_129S1SvImJ_T0054281.1 MGP_129S1SvImJ_G0025632.1 mouse_genomes_project 2 31730800 31762442 + MGP_129S1SvImJ_P0054281 Angptl2 protein_coding protein_coding MGP_129S1SvImJ_T0054282.1 MGP_129S1SvImJ_G0025632.1 mouse_genomes_project 2 31730804 31759244 + Angptl2 protein_coding retained_intron MGP_129S1SvImJ_T0054283.1 MGP_129S1SvImJ_G0025632.1 mouse_genomes_project 2 31730829 31744856 + Angptl2 protein_coding retained_intron MGP_129S1SvImJ_T0054284.1 MGP_129S1SvImJ_G0025632.1 mouse_genomes_project 2 31730848 31757118 + MGP_129S1SvImJ_P0054284 Angptl2 protein_coding protein_coding MGP_129S1SvImJ_T0059197.1 MGP_129S1SvImJ_G0026876.1 mouse_genomes_project 2 170325330 170329516 + MGP_129S1SvImJ_P0059197 Zswim1 protein_coding protein_coding MGP_129S1SvImJ_T0059198.1 MGP_129S1SvImJ_G0026876.1 mouse_genomes_project 2 170325657 170327913 + MGP_129S1SvImJ_P0059198 Zswim1 protein_coding protein_coding MGP_129S1SvImJ_T0017820.1 MGP_129S1SvImJ_G0015428.1 mouse_genomes_project 2 73661906 73695320 + D230022J07Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0057596.1 MGP_129S1SvImJ_G0026486.1 mouse_genomes_project 2 132646618 132678081 - MGP_129S1SvImJ_P0057596 Ckap2l protein_coding protein_coding MGP_129S1SvImJ_T0013528.1 MGP_129S1SvImJ_G0011617.1 mouse_genomes_project 2 44753178 44753591 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010381.1 MGP_129S1SvImJ_G0008497.1 mouse_genomes_project 2 7875604 7875684 + Mir466g miRNA miRNA MGP_129S1SvImJ_T0013490.1 MGP_129S1SvImJ_G0011579.1 mouse_genomes_project 2 30385247 30386653 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056330.1 MGP_129S1SvImJ_G0026184.1 mouse_genomes_project 2 95560491 95595138 - Hsd17b12 protein_coding processed_transcript MGP_129S1SvImJ_T0056331.1 MGP_129S1SvImJ_G0026184.1 mouse_genomes_project 2 95560491 95687968 - MGP_129S1SvImJ_P0056331 Hsd17b12 protein_coding protein_coding MGP_129S1SvImJ_T0056332.1 MGP_129S1SvImJ_G0026184.1 mouse_genomes_project 2 95560504 95687913 - Hsd17b12 protein_coding processed_transcript MGP_129S1SvImJ_T0056333.1 MGP_129S1SvImJ_G0026184.1 mouse_genomes_project 2 95561324 95595433 - Hsd17b12 protein_coding processed_transcript MGP_129S1SvImJ_T0056334.1 MGP_129S1SvImJ_G0026184.1 mouse_genomes_project 2 95644609 95687897 - Hsd17b12 protein_coding processed_transcript MGP_129S1SvImJ_T0013894.1 MGP_129S1SvImJ_G0011983.1 mouse_genomes_project 2 180795682 180796043 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054466.1 MGP_129S1SvImJ_G0025661.1 mouse_genomes_project 2 34797834 34822613 - MGP_129S1SvImJ_P0054466 Rbm18 protein_coding protein_coding MGP_129S1SvImJ_T0054467.1 MGP_129S1SvImJ_G0025661.1 mouse_genomes_project 2 34799355 34822607 - MGP_129S1SvImJ_P0054467 Rbm18 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054468.1 MGP_129S1SvImJ_G0025661.1 mouse_genomes_project 2 34799530 34822646 - MGP_129S1SvImJ_P0054468 Rbm18 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054469.1 MGP_129S1SvImJ_G0025661.1 mouse_genomes_project 2 34808772 34822642 - Rbm18 protein_coding retained_intron MGP_129S1SvImJ_T0013555.1 MGP_129S1SvImJ_G0011644.1 mouse_genomes_project 2 54734230 54735256 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053070.1 MGP_129S1SvImJ_G0025433.1 mouse_genomes_project 2 23130515 23137771 + MGP_129S1SvImJ_P0053070 Tprn protein_coding protein_coding MGP_129S1SvImJ_T0053071.1 MGP_129S1SvImJ_G0025433.1 mouse_genomes_project 2 23132138 23137442 + Tprn protein_coding processed_transcript MGP_129S1SvImJ_T0053072.1 MGP_129S1SvImJ_G0025433.1 mouse_genomes_project 2 23135449 23137057 + Tprn protein_coding processed_transcript MGP_129S1SvImJ_T0053073.1 MGP_129S1SvImJ_G0025433.1 mouse_genomes_project 2 23136821 23137401 + Tprn protein_coding processed_transcript MGP_129S1SvImJ_T0013515.1 MGP_129S1SvImJ_G0011604.1 mouse_genomes_project 2 38084504 38085269 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013689.1 MGP_129S1SvImJ_G0011778.1 mouse_genomes_project 2 98649674 98650344 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010446.1 MGP_129S1SvImJ_G0008562.1 mouse_genomes_project 2 93328654 93328715 - Mir6999 miRNA miRNA MGP_129S1SvImJ_T0017779.1 MGP_129S1SvImJ_G0015402.1 mouse_genomes_project 2 24400150 24413826 + 0610009E02Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017780.1 MGP_129S1SvImJ_G0015402.1 mouse_genomes_project 2 24400378 24412442 + 0610009E02Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017781.1 MGP_129S1SvImJ_G0015402.1 mouse_genomes_project 2 24400396 24413837 + 0610009E02Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0057323.1 MGP_129S1SvImJ_G0026421.1 mouse_genomes_project 2 125811785 125867546 + MGP_129S1SvImJ_P0057323 Sqrdl protein_coding protein_coding MGP_129S1SvImJ_T0057324.1 MGP_129S1SvImJ_G0026421.1 mouse_genomes_project 2 125811937 125842177 + MGP_129S1SvImJ_P0057324 Sqrdl protein_coding protein_coding MGP_129S1SvImJ_T0057325.1 MGP_129S1SvImJ_G0026421.1 mouse_genomes_project 2 125811939 125842184 + MGP_129S1SvImJ_P0057325 Sqrdl protein_coding protein_coding MGP_129S1SvImJ_T0057326.1 MGP_129S1SvImJ_G0026421.1 mouse_genomes_project 2 125811957 125815092 + Sqrdl protein_coding processed_transcript MGP_129S1SvImJ_T0057327.1 MGP_129S1SvImJ_G0026421.1 mouse_genomes_project 2 125828746 125858927 + Sqrdl protein_coding retained_intron MGP_129S1SvImJ_T0057328.1 MGP_129S1SvImJ_G0026421.1 mouse_genomes_project 2 125839076 125867530 + MGP_129S1SvImJ_P0057328 Sqrdl protein_coding protein_coding MGP_129S1SvImJ_T0057329.1 MGP_129S1SvImJ_G0026421.1 mouse_genomes_project 2 125842032 125845052 + Sqrdl protein_coding processed_transcript MGP_129S1SvImJ_T0057330.1 MGP_129S1SvImJ_G0026421.1 mouse_genomes_project 2 125842049 125867315 + MGP_129S1SvImJ_P0057330 Sqrdl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057331.1 MGP_129S1SvImJ_G0026421.1 mouse_genomes_project 2 125857929 125867536 + MGP_129S1SvImJ_P0057331 Sqrdl protein_coding protein_coding MGP_129S1SvImJ_T0013798.1 MGP_129S1SvImJ_G0011887.1 mouse_genomes_project 2 145091939 145092725 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055715.1 MGP_129S1SvImJ_G0025925.1 mouse_genomes_project 2 86172486 86177582 - MGP_129S1SvImJ_P0055715 Olfr993 protein_coding protein_coding MGP_129S1SvImJ_T0007311.1 MGP_129S1SvImJ_G0005997.1 mouse_genomes_project 2 119502170 119515420 + D330050G23Rik lincRNA lincRNA MGP_129S1SvImJ_T0007312.1 MGP_129S1SvImJ_G0005997.1 mouse_genomes_project 2 119502193 119515255 + D330050G23Rik lincRNA lincRNA MGP_129S1SvImJ_T0007313.1 MGP_129S1SvImJ_G0005997.1 mouse_genomes_project 2 119502212 119506071 + D330050G23Rik lincRNA lincRNA MGP_129S1SvImJ_T0059450.1 MGP_129S1SvImJ_G0026924.1 mouse_genomes_project 2 174039009 174061567 - MGP_129S1SvImJ_P0059450 protein_coding protein_coding MGP_129S1SvImJ_T0059451.1 MGP_129S1SvImJ_G0026924.1 mouse_genomes_project 2 174040242 174049475 - protein_coding retained_intron MGP_129S1SvImJ_T0059452.1 MGP_129S1SvImJ_G0026924.1 mouse_genomes_project 2 174040242 174061779 - MGP_129S1SvImJ_P0059452 protein_coding protein_coding MGP_129S1SvImJ_T0059453.1 MGP_129S1SvImJ_G0026924.1 mouse_genomes_project 2 174040243 174047738 - protein_coding retained_intron MGP_129S1SvImJ_T0059454.1 MGP_129S1SvImJ_G0026924.1 mouse_genomes_project 2 174040477 174043212 - protein_coding retained_intron MGP_129S1SvImJ_T0059455.1 MGP_129S1SvImJ_G0026924.1 mouse_genomes_project 2 174040503 174061516 - MGP_129S1SvImJ_P0059455 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059456.1 MGP_129S1SvImJ_G0026924.1 mouse_genomes_project 2 174040549 174054584 - protein_coding retained_intron MGP_129S1SvImJ_T0059457.1 MGP_129S1SvImJ_G0026924.1 mouse_genomes_project 2 174041345 174061264 - protein_coding processed_transcript MGP_129S1SvImJ_T0059458.1 MGP_129S1SvImJ_G0026924.1 mouse_genomes_project 2 174049387 174061418 - protein_coding retained_intron MGP_129S1SvImJ_T0059459.1 MGP_129S1SvImJ_G0026924.1 mouse_genomes_project 2 174051209 174061550 - protein_coding retained_intron MGP_129S1SvImJ_T0053256.1 MGP_129S1SvImJ_G0025472.1 mouse_genomes_project 2 23747755 23750140 + MGP_129S1SvImJ_P0053256 Lcn9 protein_coding protein_coding MGP_129S1SvImJ_T0017862.1 MGP_129S1SvImJ_G0015453.1 mouse_genomes_project 2 112257024 112267964 - Platr8 processed_transcript processed_transcript MGP_129S1SvImJ_T0013483.1 MGP_129S1SvImJ_G0011572.1 mouse_genomes_project 2 25006947 25007825 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102419.1 MGP_129S1SvImJ_G0040253.1 mouse_genomes_project 2 88888102 88889024 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0013641.1 MGP_129S1SvImJ_G0011730.1 mouse_genomes_project 2 84067903 84068387 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058123.1 MGP_129S1SvImJ_G0026603.1 mouse_genomes_project 2 151438932 151452508 - MGP_129S1SvImJ_P0058123 Nkx2-2 protein_coding protein_coding MGP_129S1SvImJ_T0058124.1 MGP_129S1SvImJ_G0026603.1 mouse_genomes_project 2 151445809 151452811 - MGP_129S1SvImJ_P0058124 Nkx2-2 protein_coding protein_coding MGP_129S1SvImJ_T0058125.1 MGP_129S1SvImJ_G0026603.1 mouse_genomes_project 2 151452711 151462446 - Nkx2-2 protein_coding processed_transcript MGP_129S1SvImJ_T0058126.1 MGP_129S1SvImJ_G0026603.1 mouse_genomes_project 2 151452788 151462445 - Nkx2-2 protein_coding processed_transcript MGP_129S1SvImJ_T0010402.1 MGP_129S1SvImJ_G0008518.1 mouse_genomes_project 2 24552398 24552456 - Mir126b miRNA miRNA MGP_129S1SvImJ_T0102388.1 MGP_129S1SvImJ_G0040222.1 mouse_genomes_project 2 35522105 35522687 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0013477.1 MGP_129S1SvImJ_G0011566.1 mouse_genomes_project 2 22502383 22503029 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059089.1 MGP_129S1SvImJ_G0026833.1 mouse_genomes_project 2 169363739 169387182 + MGP_129S1SvImJ_P0059089 Ywhab protein_coding protein_coding MGP_129S1SvImJ_T0059090.1 MGP_129S1SvImJ_G0026833.1 mouse_genomes_project 2 169364288 169383880 + MGP_129S1SvImJ_P0059090 Ywhab protein_coding protein_coding MGP_129S1SvImJ_T0055783.1 MGP_129S1SvImJ_G0025989.1 mouse_genomes_project 2 87960117 87961083 - MGP_129S1SvImJ_P0055783 Olfr1100 protein_coding protein_coding MGP_129S1SvImJ_T0055818.1 MGP_129S1SvImJ_G0026016.1 mouse_genomes_project 2 88695855 88696782 - MGP_129S1SvImJ_P0055818 Olfr1132 protein_coding protein_coding MGP_129S1SvImJ_T0010351.1 MGP_129S1SvImJ_G0008467.1 mouse_genomes_project 2 7823000 7823084 + Mir466m miRNA miRNA MGP_129S1SvImJ_T0057361.1 MGP_129S1SvImJ_G0026427.1 mouse_genomes_project 2 128420848 128431604 + MGP_129S1SvImJ_P0057361 Dut protein_coding protein_coding MGP_129S1SvImJ_T0057362.1 MGP_129S1SvImJ_G0026427.1 mouse_genomes_project 2 128421119 128432464 + MGP_129S1SvImJ_P0057362 Dut protein_coding protein_coding MGP_129S1SvImJ_T0057363.1 MGP_129S1SvImJ_G0026427.1 mouse_genomes_project 2 128421537 128422651 + Dut protein_coding processed_transcript MGP_129S1SvImJ_T0010443.1 MGP_129S1SvImJ_G0008559.1 mouse_genomes_project 2 81227548 81227634 - Mir684-1 miRNA miRNA MGP_129S1SvImJ_T0013432.1 MGP_129S1SvImJ_G0011521.1 mouse_genomes_project 2 6883929 6884437 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003993.1 MGP_129S1SvImJ_G0003563.1 mouse_genomes_project 2 57707183 57716444 + antisense antisense MGP_129S1SvImJ_T0003994.1 MGP_129S1SvImJ_G0003563.1 mouse_genomes_project 2 57709133 57715718 + antisense antisense MGP_129S1SvImJ_T0013713.1 MGP_129S1SvImJ_G0011802.1 mouse_genomes_project 2 106703028 106703215 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059610.1 MGP_129S1SvImJ_G0026965.1 mouse_genomes_project 2 180676128 180692510 - MGP_129S1SvImJ_P0059610 Gm20721 protein_coding protein_coding MGP_129S1SvImJ_T0055774.1 MGP_129S1SvImJ_G0025981.1 mouse_genomes_project 2 87715703 87716645 - MGP_129S1SvImJ_P0055774 Olfr1090 protein_coding protein_coding MGP_129S1SvImJ_T0010435.1 MGP_129S1SvImJ_G0008551.1 mouse_genomes_project 2 67664666 67664764 + Mir6335 miRNA miRNA MGP_129S1SvImJ_T0058150.1 MGP_129S1SvImJ_G0026615.1 mouse_genomes_project 2 153138310 153142387 + MGP_129S1SvImJ_P0058150 Cst12 protein_coding protein_coding MGP_129S1SvImJ_T0058151.1 MGP_129S1SvImJ_G0026615.1 mouse_genomes_project 2 153138321 153142496 + MGP_129S1SvImJ_P0058151 Cst12 protein_coding protein_coding MGP_129S1SvImJ_T0013594.1 MGP_129S1SvImJ_G0011683.1 mouse_genomes_project 2 67984670 67985208 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102391.1 MGP_129S1SvImJ_G0040225.1 mouse_genomes_project 2 37769489 37772310 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0057535.1 MGP_129S1SvImJ_G0026470.1 mouse_genomes_project 2 131127669 131179273 + Acoxl protein_coding processed_transcript MGP_129S1SvImJ_T0057536.1 MGP_129S1SvImJ_G0026470.1 mouse_genomes_project 2 131144799 131441410 + MGP_129S1SvImJ_P0057536 Acoxl protein_coding protein_coding MGP_129S1SvImJ_T0057537.1 MGP_129S1SvImJ_G0026470.1 mouse_genomes_project 2 131213179 131441045 + MGP_129S1SvImJ_P0057537 Acoxl protein_coding protein_coding MGP_129S1SvImJ_T0004208.1 MGP_129S1SvImJ_G0003714.1 mouse_genomes_project 2 186600425 186602015 + Gm17180 antisense antisense MGP_129S1SvImJ_T0013711.1 MGP_129S1SvImJ_G0011800.1 mouse_genomes_project 2 106651824 106652830 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054855.1 MGP_129S1SvImJ_G0025753.1 mouse_genomes_project 2 58422723 58468410 + MGP_129S1SvImJ_P0054855 Gm11099 protein_coding protein_coding MGP_129S1SvImJ_T0102389.1 MGP_129S1SvImJ_G0040223.1 mouse_genomes_project 2 35699577 35700521 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0013545.1 MGP_129S1SvImJ_G0011634.1 mouse_genomes_project 2 51106284 51106949 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059008.1 MGP_129S1SvImJ_G0026811.1 mouse_genomes_project 2 166752500 167928962 - MGP_129S1SvImJ_P0059008 Ptprt protein_coding protein_coding MGP_129S1SvImJ_T0059009.1 MGP_129S1SvImJ_G0026811.1 mouse_genomes_project 2 166752500 167928962 - MGP_129S1SvImJ_P0059009 Ptprt protein_coding protein_coding MGP_129S1SvImJ_T0059010.1 MGP_129S1SvImJ_G0026811.1 mouse_genomes_project 2 166756865 167928909 - MGP_129S1SvImJ_P0059010 Ptprt protein_coding protein_coding MGP_129S1SvImJ_T0059011.1 MGP_129S1SvImJ_G0026811.1 mouse_genomes_project 2 166758038 167928962 - MGP_129S1SvImJ_P0059011 Ptprt protein_coding protein_coding MGP_129S1SvImJ_T0059012.1 MGP_129S1SvImJ_G0026811.1 mouse_genomes_project 2 166936296 167040797 - Ptprt protein_coding processed_transcript MGP_129S1SvImJ_T0059013.1 MGP_129S1SvImJ_G0026811.1 mouse_genomes_project 2 167261770 167391135 - Ptprt protein_coding processed_transcript MGP_129S1SvImJ_T0013581.1 MGP_129S1SvImJ_G0011670.1 mouse_genomes_project 2 62371002 62372590 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007324.1 MGP_129S1SvImJ_G0006006.1 mouse_genomes_project 2 123401867 123408460 + Gm26899 lincRNA lincRNA MGP_129S1SvImJ_T0059521.1 MGP_129S1SvImJ_G0026941.1 mouse_genomes_project 2 178514749 178526021 + MGP_129S1SvImJ_P0059521 Fam210b protein_coding protein_coding MGP_129S1SvImJ_T0102436.1 MGP_129S1SvImJ_G0040270.1 mouse_genomes_project 2 109360079 109360272 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0058827.1 MGP_129S1SvImJ_G0026774.1 mouse_genomes_project 2 161986590 162054204 - MGP_129S1SvImJ_P0058827 Soga1 protein_coding protein_coding MGP_129S1SvImJ_T0058828.1 MGP_129S1SvImJ_G0026774.1 mouse_genomes_project 2 161991665 161998299 - Soga1 protein_coding processed_transcript MGP_129S1SvImJ_T0058829.1 MGP_129S1SvImJ_G0026774.1 mouse_genomes_project 2 162011175 162014327 - Soga1 protein_coding processed_transcript MGP_129S1SvImJ_T0055951.1 MGP_129S1SvImJ_G0026125.1 mouse_genomes_project 2 91459733 91460657 - MGP_129S1SvImJ_P0055951 Olfr142 protein_coding protein_coding MGP_129S1SvImJ_T0054264.1 MGP_129S1SvImJ_G0025630.1 mouse_genomes_project 2 31491665 31598105 - MGP_129S1SvImJ_P0054264 Garnl3 protein_coding protein_coding MGP_129S1SvImJ_T0054265.1 MGP_129S1SvImJ_G0025630.1 mouse_genomes_project 2 31491815 31642163 - MGP_129S1SvImJ_P0054265 Garnl3 protein_coding protein_coding MGP_129S1SvImJ_T0054266.1 MGP_129S1SvImJ_G0025630.1 mouse_genomes_project 2 31491815 31597220 - MGP_129S1SvImJ_P0054266 Garnl3 protein_coding protein_coding MGP_129S1SvImJ_T0054267.1 MGP_129S1SvImJ_G0025630.1 mouse_genomes_project 2 31509955 31513652 - Garnl3 protein_coding retained_intron MGP_129S1SvImJ_T0054268.1 MGP_129S1SvImJ_G0025630.1 mouse_genomes_project 2 31514251 31615202 - Garnl3 protein_coding processed_transcript MGP_129S1SvImJ_T0054269.1 MGP_129S1SvImJ_G0025630.1 mouse_genomes_project 2 31521093 31543196 - MGP_129S1SvImJ_P0054269 Garnl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054270.1 MGP_129S1SvImJ_G0025630.1 mouse_genomes_project 2 31525190 31535606 - Garnl3 protein_coding retained_intron MGP_129S1SvImJ_T0054271.1 MGP_129S1SvImJ_G0025630.1 mouse_genomes_project 2 31556900 31597652 - Garnl3 protein_coding processed_transcript MGP_129S1SvImJ_T0054272.1 MGP_129S1SvImJ_G0025630.1 mouse_genomes_project 2 31564465 31597409 - Garnl3 protein_coding processed_transcript MGP_129S1SvImJ_T0054273.1 MGP_129S1SvImJ_G0025630.1 mouse_genomes_project 2 31564470 31642377 - MGP_129S1SvImJ_P0054273 Garnl3 protein_coding protein_coding MGP_129S1SvImJ_T0054274.1 MGP_129S1SvImJ_G0025630.1 mouse_genomes_project 2 31564472 31642381 - MGP_129S1SvImJ_P0054274 Garnl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054275.1 MGP_129S1SvImJ_G0025630.1 mouse_genomes_project 2 31564517 31641335 - MGP_129S1SvImJ_P0054275 Garnl3 protein_coding protein_coding MGP_129S1SvImJ_T0017906.1 MGP_129S1SvImJ_G0015472.1 mouse_genomes_project 2 134364172 134398557 - A730017L22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017907.1 MGP_129S1SvImJ_G0015472.1 mouse_genomes_project 2 134370459 134398517 - A730017L22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017908.1 MGP_129S1SvImJ_G0015472.1 mouse_genomes_project 2 134376178 134398540 - A730017L22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0052598.1 MGP_129S1SvImJ_G0025350.1 mouse_genomes_project 2 9543876 9742035 - MGP_129S1SvImJ_P0052598 Itga8 protein_coding protein_coding MGP_129S1SvImJ_T0052599.1 MGP_129S1SvImJ_G0025350.1 mouse_genomes_project 2 9544723 9742005 - MGP_129S1SvImJ_P0052599 Itga8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052600.1 MGP_129S1SvImJ_G0025350.1 mouse_genomes_project 2 9546314 9570975 - MGP_129S1SvImJ_P0052600 Itga8 protein_coding protein_coding MGP_129S1SvImJ_T0052601.1 MGP_129S1SvImJ_G0025350.1 mouse_genomes_project 2 9618082 9630226 - Itga8 protein_coding retained_intron MGP_129S1SvImJ_T0052602.1 MGP_129S1SvImJ_G0025350.1 mouse_genomes_project 2 9656302 9679044 - Itga8 protein_coding processed_transcript MGP_129S1SvImJ_T0052603.1 MGP_129S1SvImJ_G0025350.1 mouse_genomes_project 2 9686379 9742035 - Itga8 protein_coding retained_intron MGP_129S1SvImJ_T0052604.1 MGP_129S1SvImJ_G0025350.1 mouse_genomes_project 2 9727076 9741701 - Itga8 protein_coding processed_transcript MGP_129S1SvImJ_T0017806.1 MGP_129S1SvImJ_G0015418.1 mouse_genomes_project 2 51758000 51764864 + A430018G15Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017807.1 MGP_129S1SvImJ_G0015418.1 mouse_genomes_project 2 51758000 51767854 + A430018G15Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0053010.1 MGP_129S1SvImJ_G0025419.1 mouse_genomes_project 2 22933274 22935082 + Entpd8 protein_coding retained_intron MGP_129S1SvImJ_T0053011.1 MGP_129S1SvImJ_G0025419.1 mouse_genomes_project 2 22933292 22938683 + MGP_129S1SvImJ_P0053011 Entpd8 protein_coding protein_coding MGP_129S1SvImJ_T0053012.1 MGP_129S1SvImJ_G0025419.1 mouse_genomes_project 2 22933295 22938683 + MGP_129S1SvImJ_P0053012 Entpd8 protein_coding protein_coding MGP_129S1SvImJ_T0053013.1 MGP_129S1SvImJ_G0025419.1 mouse_genomes_project 2 22933479 22938682 + Entpd8 protein_coding retained_intron MGP_129S1SvImJ_T0053014.1 MGP_129S1SvImJ_G0025419.1 mouse_genomes_project 2 22934777 22938119 + Entpd8 protein_coding retained_intron MGP_129S1SvImJ_T0053015.1 MGP_129S1SvImJ_G0025419.1 mouse_genomes_project 2 22934784 22938683 + MGP_129S1SvImJ_P0053015 Entpd8 protein_coding protein_coding MGP_129S1SvImJ_T0053016.1 MGP_129S1SvImJ_G0025419.1 mouse_genomes_project 2 22934999 22936701 + MGP_129S1SvImJ_P0053016 Entpd8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053017.1 MGP_129S1SvImJ_G0025419.1 mouse_genomes_project 2 22937643 22938541 + Entpd8 protein_coding retained_intron MGP_129S1SvImJ_T0058548.1 MGP_129S1SvImJ_G0026733.1 mouse_genomes_project 2 160197509 160202533 + MGP_129S1SvImJ_P0058548 Trp53inp2 protein_coding protein_coding MGP_129S1SvImJ_T0058549.1 MGP_129S1SvImJ_G0026733.1 mouse_genomes_project 2 160198301 160206253 + MGP_129S1SvImJ_P0058549 Trp53inp2 protein_coding protein_coding MGP_129S1SvImJ_T0058550.1 MGP_129S1SvImJ_G0026733.1 mouse_genomes_project 2 160198327 160203157 + MGP_129S1SvImJ_P0058550 Trp53inp2 protein_coding protein_coding MGP_129S1SvImJ_T0058551.1 MGP_129S1SvImJ_G0026733.1 mouse_genomes_project 2 160198347 160202432 + Trp53inp2 protein_coding retained_intron MGP_129S1SvImJ_T0058552.1 MGP_129S1SvImJ_G0026733.1 mouse_genomes_project 2 160198689 160202444 + MGP_129S1SvImJ_P0058552 Trp53inp2 protein_coding protein_coding MGP_129S1SvImJ_T0057999.1 MGP_129S1SvImJ_G0026576.1 mouse_genomes_project 2 147580537 147848664 + MGP_129S1SvImJ_P0057999 Pcsk2 protein_coding protein_coding MGP_129S1SvImJ_T0058000.1 MGP_129S1SvImJ_G0026576.1 mouse_genomes_project 2 147580652 147611656 + Pcsk2 protein_coding processed_transcript MGP_129S1SvImJ_T0052632.1 MGP_129S1SvImJ_G0025353.1 mouse_genomes_project 2 10476286 10484624 - MGP_129S1SvImJ_P0052632 C1ql3 protein_coding protein_coding MGP_129S1SvImJ_T0052650.1 MGP_129S1SvImJ_G0025357.1 mouse_genomes_project 2 11079883 11080790 + MGP_129S1SvImJ_P0052650 Vim protein_coding protein_coding MGP_129S1SvImJ_T0052651.1 MGP_129S1SvImJ_G0025357.1 mouse_genomes_project 2 11079908 11088791 + MGP_129S1SvImJ_P0052651 Vim protein_coding protein_coding MGP_129S1SvImJ_T0052652.1 MGP_129S1SvImJ_G0025357.1 mouse_genomes_project 2 11080237 11088790 + MGP_129S1SvImJ_P0052652 Vim protein_coding protein_coding MGP_129S1SvImJ_T0052653.1 MGP_129S1SvImJ_G0025357.1 mouse_genomes_project 2 11080278 11084561 + Vim protein_coding retained_intron MGP_129S1SvImJ_T0052654.1 MGP_129S1SvImJ_G0025357.1 mouse_genomes_project 2 11080479 11083405 + Vim protein_coding retained_intron MGP_129S1SvImJ_T0052655.1 MGP_129S1SvImJ_G0025357.1 mouse_genomes_project 2 11085334 11088443 + Vim protein_coding retained_intron MGP_129S1SvImJ_T0102408.1 MGP_129S1SvImJ_G0040242.1 mouse_genomes_project 2 87267973 87268992 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0055664.1 MGP_129S1SvImJ_G0025911.1 mouse_genomes_project 2 85493978 85504511 + MGP_129S1SvImJ_P0055664 protein_coding protein_coding MGP_129S1SvImJ_T0055665.1 MGP_129S1SvImJ_G0025911.1 mouse_genomes_project 2 85494053 85507232 + MGP_129S1SvImJ_P0055665 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0055666.1 MGP_129S1SvImJ_G0025911.1 mouse_genomes_project 2 85500822 85508074 + protein_coding processed_transcript MGP_129S1SvImJ_T0055667.1 MGP_129S1SvImJ_G0025911.1 mouse_genomes_project 2 85504348 85507310 + protein_coding retained_intron MGP_129S1SvImJ_T0058071.1 MGP_129S1SvImJ_G0026594.1 mouse_genomes_project 2 149940920 149981698 + MGP_129S1SvImJ_P0058071 Rin2 protein_coding protein_coding MGP_129S1SvImJ_T0058072.1 MGP_129S1SvImJ_G0026594.1 mouse_genomes_project 2 149942175 150050338 + MGP_129S1SvImJ_P0058072 Rin2 protein_coding protein_coding MGP_129S1SvImJ_T0058073.1 MGP_129S1SvImJ_G0026594.1 mouse_genomes_project 2 149942311 150050338 + MGP_129S1SvImJ_P0058073 Rin2 protein_coding protein_coding MGP_129S1SvImJ_T0058074.1 MGP_129S1SvImJ_G0026594.1 mouse_genomes_project 2 149942357 149982100 + MGP_129S1SvImJ_P0058074 Rin2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058075.1 MGP_129S1SvImJ_G0026594.1 mouse_genomes_project 2 149981545 150006356 + Rin2 protein_coding processed_transcript MGP_129S1SvImJ_T0058076.1 MGP_129S1SvImJ_G0026594.1 mouse_genomes_project 2 149981684 150006625 + Rin2 protein_coding processed_transcript MGP_129S1SvImJ_T0058077.1 MGP_129S1SvImJ_G0026594.1 mouse_genomes_project 2 150024152 150041696 + Rin2 protein_coding processed_transcript MGP_129S1SvImJ_T0013446.1 MGP_129S1SvImJ_G0011535.1 mouse_genomes_project 2 12945940 12946910 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053960.1 MGP_129S1SvImJ_G0025583.1 mouse_genomes_project 2 29563622 29613505 + MGP_129S1SvImJ_P0053960 Ncs1 protein_coding protein_coding MGP_129S1SvImJ_T0053961.1 MGP_129S1SvImJ_G0025583.1 mouse_genomes_project 2 29563965 29609846 + MGP_129S1SvImJ_P0053961 Ncs1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0100946.1 MGP_129S1SvImJ_G0039013.1 mouse_genomes_project 2 65182783 65182897 - Gm24138 snoRNA snoRNA MGP_129S1SvImJ_T0013854.1 MGP_129S1SvImJ_G0011943.1 mouse_genomes_project 2 161725059 161725651 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013899.1 MGP_129S1SvImJ_G0011988.1 mouse_genomes_project 2 185479404 185480416 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007333.1 MGP_129S1SvImJ_G0006015.1 mouse_genomes_project 2 132598238 132614787 + A730036I17Rik lincRNA lincRNA MGP_129S1SvImJ_T0007334.1 MGP_129S1SvImJ_G0006015.1 mouse_genomes_project 2 132598297 132612450 + A730036I17Rik lincRNA lincRNA MGP_129S1SvImJ_T0007335.1 MGP_129S1SvImJ_G0006015.1 mouse_genomes_project 2 132607228 132611167 + A730036I17Rik lincRNA lincRNA MGP_129S1SvImJ_T0098744.1 MGP_129S1SvImJ_G0036829.1 mouse_genomes_project 2 109041053 109041177 + Gm22813 scaRNA scaRNA MGP_129S1SvImJ_T0055833.1 MGP_129S1SvImJ_G0026029.1 mouse_genomes_project 2 88905605 88906550 + MGP_129S1SvImJ_P0055833 Olfr1148 protein_coding protein_coding MGP_129S1SvImJ_T0058497.1 MGP_129S1SvImJ_G0026721.1 mouse_genomes_project 2 159375607 159376108 - MGP_129S1SvImJ_P0058497 4930519P11Rik protein_coding protein_coding MGP_129S1SvImJ_T0007135.1 MGP_129S1SvImJ_G0005857.1 mouse_genomes_project 2 3412645 3413966 - Gm13383 lincRNA lincRNA MGP_129S1SvImJ_T0058280.1 MGP_129S1SvImJ_G0026653.1 mouse_genomes_project 2 156755245 156808559 + MGP_129S1SvImJ_P0058280 Csnk2a1 protein_coding protein_coding MGP_129S1SvImJ_T0058281.1 MGP_129S1SvImJ_G0026653.1 mouse_genomes_project 2 156755282 156800037 + Csnk2a1 protein_coding retained_intron MGP_129S1SvImJ_T0058282.1 MGP_129S1SvImJ_G0026653.1 mouse_genomes_project 2 156755302 156793749 + MGP_129S1SvImJ_P0058282 Csnk2a1 protein_coding protein_coding MGP_129S1SvImJ_T0058283.1 MGP_129S1SvImJ_G0026653.1 mouse_genomes_project 2 156755314 156790316 + MGP_129S1SvImJ_P0058283 Csnk2a1 protein_coding protein_coding MGP_129S1SvImJ_T0058284.1 MGP_129S1SvImJ_G0026653.1 mouse_genomes_project 2 156755319 156785798 + Csnk2a1 protein_coding retained_intron MGP_129S1SvImJ_T0054175.1 MGP_129S1SvImJ_G0025616.1 mouse_genomes_project 2 31125492 31162391 + MGP_129S1SvImJ_P0054175 Eng protein_coding protein_coding MGP_129S1SvImJ_T0054176.1 MGP_129S1SvImJ_G0025616.1 mouse_genomes_project 2 31125492 31162931 + MGP_129S1SvImJ_P0054176 Eng protein_coding protein_coding MGP_129S1SvImJ_T0054177.1 MGP_129S1SvImJ_G0025616.1 mouse_genomes_project 2 31125519 31162942 + MGP_129S1SvImJ_P0054177 Eng protein_coding protein_coding MGP_129S1SvImJ_T0054178.1 MGP_129S1SvImJ_G0025616.1 mouse_genomes_project 2 31125890 31129263 + Eng protein_coding processed_transcript MGP_129S1SvImJ_T0054179.1 MGP_129S1SvImJ_G0025616.1 mouse_genomes_project 2 31151657 31152560 + Eng protein_coding retained_intron MGP_129S1SvImJ_T0054180.1 MGP_129S1SvImJ_G0025616.1 mouse_genomes_project 2 31152180 31161528 + MGP_129S1SvImJ_P0054180 Eng protein_coding protein_coding MGP_129S1SvImJ_T0102406.1 MGP_129S1SvImJ_G0040240.1 mouse_genomes_project 2 87136674 87137621 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0055232.1 MGP_129S1SvImJ_G0025819.1 mouse_genomes_project 2 71194829 71223671 + MGP_129S1SvImJ_P0055232 Cybrd1 protein_coding protein_coding MGP_129S1SvImJ_T0053183.1 MGP_129S1SvImJ_G0025451.1 mouse_genomes_project 2 23390116 23393192 - MGP_129S1SvImJ_P0053183 C8g protein_coding protein_coding MGP_129S1SvImJ_T0053184.1 MGP_129S1SvImJ_G0025451.1 mouse_genomes_project 2 23390116 23392079 - MGP_129S1SvImJ_P0053184 C8g protein_coding protein_coding MGP_129S1SvImJ_T0053185.1 MGP_129S1SvImJ_G0025451.1 mouse_genomes_project 2 23390121 23391721 - C8g protein_coding processed_transcript MGP_129S1SvImJ_T0053186.1 MGP_129S1SvImJ_G0025451.1 mouse_genomes_project 2 23390121 23390968 - C8g protein_coding processed_transcript MGP_129S1SvImJ_T0053187.1 MGP_129S1SvImJ_G0025451.1 mouse_genomes_project 2 23390121 23391701 - C8g protein_coding processed_transcript MGP_129S1SvImJ_T0053188.1 MGP_129S1SvImJ_G0025451.1 mouse_genomes_project 2 23390123 23391709 - C8g protein_coding processed_transcript MGP_129S1SvImJ_T0053189.1 MGP_129S1SvImJ_G0025451.1 mouse_genomes_project 2 23390362 23391580 - C8g protein_coding processed_transcript MGP_129S1SvImJ_T0013540.1 MGP_129S1SvImJ_G0011629.1 mouse_genomes_project 2 49903710 49904122 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010356.1 MGP_129S1SvImJ_G0008472.1 mouse_genomes_project 2 7824406 7824510 + Gm23578 miRNA miRNA MGP_129S1SvImJ_T0010462.1 MGP_129S1SvImJ_G0008578.1 mouse_genomes_project 2 116627064 116627119 - Mir7002 miRNA miRNA MGP_129S1SvImJ_T0004035.1 MGP_129S1SvImJ_G0003591.1 mouse_genomes_project 2 73944027 73946021 + Chn1os1 antisense antisense MGP_129S1SvImJ_T0007332.1 MGP_129S1SvImJ_G0006014.1 mouse_genomes_project 2 131758461 131759383 + Gm14010 lincRNA lincRNA MGP_129S1SvImJ_T0059572.1 MGP_129S1SvImJ_G0026957.1 mouse_genomes_project 2 179816368 179823378 + MGP_129S1SvImJ_P0059572 1700021F07Rik protein_coding protein_coding MGP_129S1SvImJ_T0007431.1 MGP_129S1SvImJ_G0006098.1 mouse_genomes_project 2 177341584 177347283 + 1700007M16Rik lincRNA lincRNA MGP_129S1SvImJ_T0013601.1 MGP_129S1SvImJ_G0011690.1 mouse_genomes_project 2 71517571 71517940 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007350.1 MGP_129S1SvImJ_G0006029.1 mouse_genomes_project 2 142417792 142479515 + Gm14061 lincRNA lincRNA MGP_129S1SvImJ_T0001073.1 MGP_129S1SvImJ_G0001002.1 mouse_genomes_project 2 12261554 12263936 - TEC TEC MGP_129S1SvImJ_T0058051.1 MGP_129S1SvImJ_G0026589.1 mouse_genomes_project 2 148664376 148677302 + MGP_129S1SvImJ_P0058051 Sec23b protein_coding protein_coding MGP_129S1SvImJ_T0058052.1 MGP_129S1SvImJ_G0026589.1 mouse_genomes_project 2 148664403 148700015 + MGP_129S1SvImJ_P0058052 Sec23b protein_coding protein_coding MGP_129S1SvImJ_T0058053.1 MGP_129S1SvImJ_G0026589.1 mouse_genomes_project 2 148664428 148667580 + MGP_129S1SvImJ_P0058053 Sec23b protein_coding protein_coding MGP_129S1SvImJ_T0058054.1 MGP_129S1SvImJ_G0026589.1 mouse_genomes_project 2 148664459 148667688 + Sec23b protein_coding processed_transcript MGP_129S1SvImJ_T0058055.1 MGP_129S1SvImJ_G0026589.1 mouse_genomes_project 2 148664466 148676092 + MGP_129S1SvImJ_P0058055 Sec23b protein_coding protein_coding MGP_129S1SvImJ_T0058056.1 MGP_129S1SvImJ_G0026589.1 mouse_genomes_project 2 148664481 148673941 + MGP_129S1SvImJ_P0058056 Sec23b protein_coding protein_coding MGP_129S1SvImJ_T0058057.1 MGP_129S1SvImJ_G0026589.1 mouse_genomes_project 2 148674187 148700015 + Sec23b protein_coding processed_transcript MGP_129S1SvImJ_T0058058.1 MGP_129S1SvImJ_G0026589.1 mouse_genomes_project 2 148686468 148690347 + Sec23b protein_coding processed_transcript MGP_129S1SvImJ_T0007259.1 MGP_129S1SvImJ_G0005955.1 mouse_genomes_project 2 83032381 83051952 - A130030D18Rik lincRNA lincRNA MGP_129S1SvImJ_T0013600.1 MGP_129S1SvImJ_G0011689.1 mouse_genomes_project 2 70925496 70926394 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058506.1 MGP_129S1SvImJ_G0026725.1 mouse_genomes_project 2 159574979 159650571 + MGP_129S1SvImJ_P0058506 Raly protein_coding protein_coding MGP_129S1SvImJ_T0058507.1 MGP_129S1SvImJ_G0026725.1 mouse_genomes_project 2 159574989 159647071 + MGP_129S1SvImJ_P0058507 Raly protein_coding protein_coding MGP_129S1SvImJ_T0058508.1 MGP_129S1SvImJ_G0026725.1 mouse_genomes_project 2 159574993 159650587 + MGP_129S1SvImJ_P0058508 Raly protein_coding protein_coding MGP_129S1SvImJ_T0058509.1 MGP_129S1SvImJ_G0026725.1 mouse_genomes_project 2 159575001 159645171 + MGP_129S1SvImJ_P0058509 Raly protein_coding protein_coding MGP_129S1SvImJ_T0058510.1 MGP_129S1SvImJ_G0026725.1 mouse_genomes_project 2 159575016 159650570 + MGP_129S1SvImJ_P0058510 Raly protein_coding protein_coding MGP_129S1SvImJ_T0058511.1 MGP_129S1SvImJ_G0026725.1 mouse_genomes_project 2 159575040 159650587 + MGP_129S1SvImJ_P0058511 Raly protein_coding protein_coding MGP_129S1SvImJ_T0058512.1 MGP_129S1SvImJ_G0026725.1 mouse_genomes_project 2 159575235 159647284 + MGP_129S1SvImJ_P0058512 Raly protein_coding protein_coding MGP_129S1SvImJ_T0058513.1 MGP_129S1SvImJ_G0026725.1 mouse_genomes_project 2 159575237 159631691 + Raly protein_coding processed_transcript MGP_129S1SvImJ_T0058514.1 MGP_129S1SvImJ_G0026725.1 mouse_genomes_project 2 159575252 159640575 + Raly protein_coding processed_transcript MGP_129S1SvImJ_T0058516.1 MGP_129S1SvImJ_G0026725.1 mouse_genomes_project 2 159575596 159640688 + Raly protein_coding processed_transcript MGP_129S1SvImJ_T0055785.1 MGP_129S1SvImJ_G0025991.1 mouse_genomes_project 2 87984712 87985687 + MGP_129S1SvImJ_P0055785 Olfr1102 protein_coding protein_coding MGP_129S1SvImJ_T0007264.1 MGP_129S1SvImJ_G0005960.1 mouse_genomes_project 2 92570039 92575292 - Gm17281 lincRNA lincRNA MGP_129S1SvImJ_T0101666.1 MGP_129S1SvImJ_G0039689.1 mouse_genomes_project 2 22294240 22294826 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0007293.1 MGP_129S1SvImJ_G0005982.1 mouse_genomes_project 2 108226739 108228803 - Gm29053 lincRNA lincRNA MGP_129S1SvImJ_T0055888.1 MGP_129S1SvImJ_G0026080.1 mouse_genomes_project 2 90255285 90256450 - MGP_129S1SvImJ_P0055888 Olfr1219 protein_coding protein_coding MGP_129S1SvImJ_T0013827.1 MGP_129S1SvImJ_G0011916.1 mouse_genomes_project 2 153720611 153721330 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013708.1 MGP_129S1SvImJ_G0011797.1 mouse_genomes_project 2 105840743 105841025 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059856.1 MGP_129S1SvImJ_G0027020.1 mouse_genomes_project 2 187943610 187952239 - MGP_129S1SvImJ_P0059856 Arfrp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059857.1 MGP_129S1SvImJ_G0027020.1 mouse_genomes_project 2 187943666 187945922 - Arfrp1 protein_coding retained_intron MGP_129S1SvImJ_T0059858.1 MGP_129S1SvImJ_G0027020.1 mouse_genomes_project 2 187945096 187952231 - Arfrp1 protein_coding retained_intron MGP_129S1SvImJ_T0059859.1 MGP_129S1SvImJ_G0027020.1 mouse_genomes_project 2 187945209 187952217 - Arfrp1 protein_coding retained_intron MGP_129S1SvImJ_T0059860.1 MGP_129S1SvImJ_G0027020.1 mouse_genomes_project 2 187945255 187952221 - MGP_129S1SvImJ_P0059860 Arfrp1 protein_coding protein_coding MGP_129S1SvImJ_T0059861.1 MGP_129S1SvImJ_G0027020.1 mouse_genomes_project 2 187945283 187951708 - Arfrp1 protein_coding retained_intron MGP_129S1SvImJ_T0059862.1 MGP_129S1SvImJ_G0027020.1 mouse_genomes_project 2 187945490 187952258 - Arfrp1 protein_coding retained_intron MGP_129S1SvImJ_T0059863.1 MGP_129S1SvImJ_G0027020.1 mouse_genomes_project 2 187945496 187952235 - MGP_129S1SvImJ_P0059863 Arfrp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059864.1 MGP_129S1SvImJ_G0027020.1 mouse_genomes_project 2 187947230 187952164 - Arfrp1 protein_coding processed_transcript MGP_129S1SvImJ_T0059865.1 MGP_129S1SvImJ_G0027020.1 mouse_genomes_project 2 187951186 187952248 - Arfrp1 protein_coding retained_intron MGP_129S1SvImJ_T0007256.1 MGP_129S1SvImJ_G0005953.1 mouse_genomes_project 2 78710516 78776818 + Gm14461 lincRNA lincRNA MGP_129S1SvImJ_T0007257.1 MGP_129S1SvImJ_G0005953.1 mouse_genomes_project 2 78776279 78776588 + Gm14461 lincRNA lincRNA MGP_129S1SvImJ_T0004083.1 MGP_129S1SvImJ_G0003620.1 mouse_genomes_project 2 120984167 120987412 + 1700054M17Rik antisense antisense MGP_129S1SvImJ_T0013604.1 MGP_129S1SvImJ_G0011693.1 mouse_genomes_project 2 72738618 72739019 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053572.1 MGP_129S1SvImJ_G0025529.1 mouse_genomes_project 2 26716397 26749027 + MGP_129S1SvImJ_P0053572 Tsc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053573.1 MGP_129S1SvImJ_G0025529.1 mouse_genomes_project 2 26716406 26768440 + MGP_129S1SvImJ_P0053573 Tsc1 protein_coding protein_coding MGP_129S1SvImJ_T0053574.1 MGP_129S1SvImJ_G0025529.1 mouse_genomes_project 2 26716410 26765821 + MGP_129S1SvImJ_P0053574 Tsc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053575.1 MGP_129S1SvImJ_G0025529.1 mouse_genomes_project 2 26716410 26768440 + MGP_129S1SvImJ_P0053575 Tsc1 protein_coding protein_coding MGP_129S1SvImJ_T0053576.1 MGP_129S1SvImJ_G0025529.1 mouse_genomes_project 2 26716412 26768440 + MGP_129S1SvImJ_P0053576 Tsc1 protein_coding protein_coding MGP_129S1SvImJ_T0053577.1 MGP_129S1SvImJ_G0025529.1 mouse_genomes_project 2 26716419 26751154 + Tsc1 protein_coding retained_intron MGP_129S1SvImJ_T0053578.1 MGP_129S1SvImJ_G0025529.1 mouse_genomes_project 2 26716423 26744477 + Tsc1 protein_coding retained_intron MGP_129S1SvImJ_T0053579.1 MGP_129S1SvImJ_G0025529.1 mouse_genomes_project 2 26735078 26768440 + MGP_129S1SvImJ_P0053579 Tsc1 protein_coding protein_coding MGP_129S1SvImJ_T0053580.1 MGP_129S1SvImJ_G0025529.1 mouse_genomes_project 2 26739903 26742483 + Tsc1 protein_coding retained_intron MGP_129S1SvImJ_T0053581.1 MGP_129S1SvImJ_G0025529.1 mouse_genomes_project 2 26747532 26749707 + Tsc1 protein_coding retained_intron MGP_129S1SvImJ_T0053582.1 MGP_129S1SvImJ_G0025529.1 mouse_genomes_project 2 26748797 26749849 + Tsc1 protein_coding retained_intron MGP_129S1SvImJ_T0011533.1 MGP_129S1SvImJ_G0009649.1 mouse_genomes_project 2 130766101 130766393 - Gm22613 misc_RNA misc_RNA MGP_129S1SvImJ_T0013753.1 MGP_129S1SvImJ_G0011842.1 mouse_genomes_project 2 124292900 124293147 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013876.1 MGP_129S1SvImJ_G0011965.1 mouse_genomes_project 2 171527771 171528368 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013456.1 MGP_129S1SvImJ_G0011545.1 mouse_genomes_project 2 16034819 16035230 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102395.1 MGP_129S1SvImJ_G0040229.1 mouse_genomes_project 2 85867024 85869566 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0053301.1 MGP_129S1SvImJ_G0025479.1 mouse_genomes_project 2 24160829 24190169 - MGP_129S1SvImJ_P0053301 Qsox2 protein_coding protein_coding MGP_129S1SvImJ_T0053302.1 MGP_129S1SvImJ_G0025479.1 mouse_genomes_project 2 24160831 24190342 - MGP_129S1SvImJ_P0053302 Qsox2 protein_coding protein_coding MGP_129S1SvImJ_T0013838.1 MGP_129S1SvImJ_G0011927.1 mouse_genomes_project 2 157172408 157172625 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001095.1 MGP_129S1SvImJ_G0001024.1 mouse_genomes_project 2 37257883 37262740 + TEC TEC MGP_129S1SvImJ_T0010471.1 MGP_129S1SvImJ_G0008587.1 mouse_genomes_project 2 130290212 130290337 + Gm24081 miRNA miRNA MGP_129S1SvImJ_T0055869.1 MGP_129S1SvImJ_G0026063.1 mouse_genomes_project 2 89884592 89930694 - MGP_129S1SvImJ_P0055869 protein_coding protein_coding MGP_129S1SvImJ_T0056637.1 MGP_129S1SvImJ_G0026252.1 mouse_genomes_project 2 113628078 113629017 - MGP_129S1SvImJ_P0056637 Olfr1275 protein_coding protein_coding MGP_129S1SvImJ_T0098864.1 MGP_129S1SvImJ_G0036943.1 mouse_genomes_project 2 165772384 165774235 + Gm14222 sense_intronic sense_intronic MGP_129S1SvImJ_T0007355.1 MGP_129S1SvImJ_G0006033.1 mouse_genomes_project 2 151602579 151604096 - Gm14110 lincRNA lincRNA MGP_129S1SvImJ_T0058758.1 MGP_129S1SvImJ_G0026763.1 mouse_genomes_project 2 161190786 161254911 + MGP_129S1SvImJ_P0058758 Cnbd2 protein_coding protein_coding MGP_129S1SvImJ_T0058759.1 MGP_129S1SvImJ_G0026763.1 mouse_genomes_project 2 161191065 161220484 + Cnbd2 protein_coding processed_transcript MGP_129S1SvImJ_T0058760.1 MGP_129S1SvImJ_G0026763.1 mouse_genomes_project 2 161191104 161199673 + Cnbd2 protein_coding retained_intron MGP_129S1SvImJ_T0058761.1 MGP_129S1SvImJ_G0026763.1 mouse_genomes_project 2 161191120 161254914 + MGP_129S1SvImJ_P0058761 Cnbd2 protein_coding protein_coding MGP_129S1SvImJ_T0058762.1 MGP_129S1SvImJ_G0026763.1 mouse_genomes_project 2 161215713 161221086 + Cnbd2 protein_coding processed_transcript MGP_129S1SvImJ_T0053617.1 MGP_129S1SvImJ_G0025538.1 mouse_genomes_project 2 27314332 27372323 - MGP_129S1SvImJ_P0053617 Ntng2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053618.1 MGP_129S1SvImJ_G0025538.1 mouse_genomes_project 2 27314585 27372297 - MGP_129S1SvImJ_P0053618 Ntng2 protein_coding protein_coding MGP_129S1SvImJ_T0053619.1 MGP_129S1SvImJ_G0025538.1 mouse_genomes_project 2 27314612 27372238 - MGP_129S1SvImJ_P0053619 Ntng2 protein_coding protein_coding MGP_129S1SvImJ_T0053620.1 MGP_129S1SvImJ_G0025538.1 mouse_genomes_project 2 27314612 27372238 - MGP_129S1SvImJ_P0053620 Ntng2 protein_coding protein_coding MGP_129S1SvImJ_T0053621.1 MGP_129S1SvImJ_G0025538.1 mouse_genomes_project 2 27314612 27372238 - MGP_129S1SvImJ_P0053621 Ntng2 protein_coding protein_coding MGP_129S1SvImJ_T0053622.1 MGP_129S1SvImJ_G0025538.1 mouse_genomes_project 2 27318259 27325439 - Ntng2 protein_coding processed_transcript MGP_129S1SvImJ_T0053623.1 MGP_129S1SvImJ_G0025538.1 mouse_genomes_project 2 27318432 27326337 - Ntng2 protein_coding processed_transcript MGP_129S1SvImJ_T0053624.1 MGP_129S1SvImJ_G0025538.1 mouse_genomes_project 2 27321976 27325439 - Ntng2 protein_coding processed_transcript MGP_129S1SvImJ_T0053625.1 MGP_129S1SvImJ_G0025538.1 mouse_genomes_project 2 27322090 27326337 - Ntng2 protein_coding processed_transcript MGP_129S1SvImJ_T0053626.1 MGP_129S1SvImJ_G0025538.1 mouse_genomes_project 2 27325236 27377203 - MGP_129S1SvImJ_P0053626 Ntng2 protein_coding protein_coding MGP_129S1SvImJ_T0053627.1 MGP_129S1SvImJ_G0025538.1 mouse_genomes_project 2 27353518 27372330 - Ntng2 protein_coding processed_transcript MGP_129S1SvImJ_T0007169.1 MGP_129S1SvImJ_G0005882.1 mouse_genomes_project 2 24083672 24084670 + 1810012K08Rik lincRNA lincRNA MGP_129S1SvImJ_T0013469.1 MGP_129S1SvImJ_G0011558.1 mouse_genomes_project 2 20760151 20760688 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013843.1 MGP_129S1SvImJ_G0011932.1 mouse_genomes_project 2 159999560 160000947 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011515.1 MGP_129S1SvImJ_G0009631.1 mouse_genomes_project 2 39430036 39430206 - Gm27348 misc_RNA misc_RNA MGP_129S1SvImJ_T0057957.1 MGP_129S1SvImJ_G0026566.1 mouse_genomes_project 2 143743494 143988800 - MGP_129S1SvImJ_P0057957 Tasp1 protein_coding protein_coding MGP_129S1SvImJ_T0057958.1 MGP_129S1SvImJ_G0026566.1 mouse_genomes_project 2 143743494 143988775 - MGP_129S1SvImJ_P0057958 Tasp1 protein_coding protein_coding MGP_129S1SvImJ_T0057959.1 MGP_129S1SvImJ_G0026566.1 mouse_genomes_project 2 143743494 143988820 - MGP_129S1SvImJ_P0057959 Tasp1 protein_coding protein_coding MGP_129S1SvImJ_T0057960.1 MGP_129S1SvImJ_G0026566.1 mouse_genomes_project 2 143892622 143964207 - Tasp1 protein_coding retained_intron MGP_129S1SvImJ_T0056358.1 MGP_129S1SvImJ_G0026190.1 mouse_genomes_project 2 103508949 103520166 - MGP_129S1SvImJ_P0056358 Rag1 protein_coding protein_coding MGP_129S1SvImJ_T0013694.1 MGP_129S1SvImJ_G0011783.1 mouse_genomes_project 2 101781842 101782026 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055543.1 MGP_129S1SvImJ_G0025881.1 mouse_genomes_project 2 80398110 80705165 - MGP_129S1SvImJ_P0055543 Pde1a protein_coding protein_coding MGP_129S1SvImJ_T0055544.1 MGP_129S1SvImJ_G0025881.1 mouse_genomes_project 2 80420663 80469580 - MGP_129S1SvImJ_P0055544 Pde1a protein_coding protein_coding MGP_129S1SvImJ_T0055545.1 MGP_129S1SvImJ_G0025881.1 mouse_genomes_project 2 80420663 80469580 - MGP_129S1SvImJ_P0055545 Pde1a protein_coding protein_coding MGP_129S1SvImJ_T0055546.1 MGP_129S1SvImJ_G0025881.1 mouse_genomes_project 2 80426622 80493543 - MGP_129S1SvImJ_P0055546 Pde1a protein_coding protein_coding MGP_129S1SvImJ_T0055547.1 MGP_129S1SvImJ_G0025881.1 mouse_genomes_project 2 80467081 80608722 - Pde1a protein_coding processed_transcript MGP_129S1SvImJ_T0055548.1 MGP_129S1SvImJ_G0025881.1 mouse_genomes_project 2 80474389 80705789 - Pde1a protein_coding processed_transcript MGP_129S1SvImJ_T0001059.1 MGP_129S1SvImJ_G0000988.1 mouse_genomes_project 2 9835231 9837843 - TEC TEC MGP_129S1SvImJ_T0056641.1 MGP_129S1SvImJ_G0026256.1 mouse_genomes_project 2 113719149 113720484 + MGP_129S1SvImJ_P0056641 protein_coding protein_coding MGP_129S1SvImJ_T0001083.1 MGP_129S1SvImJ_G0001012.1 mouse_genomes_project 2 30948755 30952916 + TEC TEC MGP_129S1SvImJ_T0100948.1 MGP_129S1SvImJ_G0039015.1 mouse_genomes_project 2 72168606 72168733 - Gm26408 snoRNA snoRNA MGP_129S1SvImJ_T0058495.1 MGP_129S1SvImJ_G0026720.1 mouse_genomes_project 2 159348455 159366372 - MGP_129S1SvImJ_P0058495 Pxmp4 protein_coding protein_coding MGP_129S1SvImJ_T0058496.1 MGP_129S1SvImJ_G0026720.1 mouse_genomes_project 2 159357925 159366352 - MGP_129S1SvImJ_P0058496 Pxmp4 protein_coding protein_coding MGP_129S1SvImJ_T0055645.1 MGP_129S1SvImJ_G0025904.1 mouse_genomes_project 2 85353849 85360444 - MGP_129S1SvImJ_P0055645 Tmx2 protein_coding protein_coding MGP_129S1SvImJ_T0055646.1 MGP_129S1SvImJ_G0025904.1 mouse_genomes_project 2 85354060 85359659 - Tmx2 protein_coding processed_transcript MGP_129S1SvImJ_T0055647.1 MGP_129S1SvImJ_G0025904.1 mouse_genomes_project 2 85357721 85360756 - MGP_129S1SvImJ_P0055647 Tmx2 protein_coding protein_coding MGP_129S1SvImJ_T0099718.1 MGP_129S1SvImJ_G0037785.1 mouse_genomes_project 2 188285208 188285315 + Gm25879 snRNA snRNA MGP_129S1SvImJ_T0055119.1 MGP_129S1SvImJ_G0025796.1 mouse_genomes_project 2 69146313 69163119 + G6pc2 protein_coding processed_transcript MGP_129S1SvImJ_T0055120.1 MGP_129S1SvImJ_G0025796.1 mouse_genomes_project 2 69156405 69164277 + MGP_129S1SvImJ_P0055120 G6pc2 protein_coding protein_coding MGP_129S1SvImJ_T0055121.1 MGP_129S1SvImJ_G0025796.1 mouse_genomes_project 2 69156432 69164277 + MGP_129S1SvImJ_P0055121 G6pc2 protein_coding protein_coding MGP_129S1SvImJ_T0055122.1 MGP_129S1SvImJ_G0025796.1 mouse_genomes_project 2 69156462 69163271 + G6pc2 protein_coding processed_transcript MGP_129S1SvImJ_T0004091.1 MGP_129S1SvImJ_G0003628.1 mouse_genomes_project 2 128376081 128388266 - Gm14002 antisense antisense MGP_129S1SvImJ_T0055872.1 MGP_129S1SvImJ_G0026066.1 mouse_genomes_project 2 89929683 89930694 - MGP_129S1SvImJ_P0055872 Olfr1200 protein_coding protein_coding MGP_129S1SvImJ_T0053906.1 MGP_129S1SvImJ_G0025577.1 mouse_genomes_project 2 29249366 29255423 + MGP_129S1SvImJ_P0053906 Tor1b protein_coding protein_coding MGP_129S1SvImJ_T0053907.1 MGP_129S1SvImJ_G0025577.1 mouse_genomes_project 2 29249386 29255419 + Tor1b protein_coding retained_intron MGP_129S1SvImJ_T0053908.1 MGP_129S1SvImJ_G0025577.1 mouse_genomes_project 2 29249398 29252902 + MGP_129S1SvImJ_P0053908 Tor1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053909.1 MGP_129S1SvImJ_G0025577.1 mouse_genomes_project 2 29249579 29253393 + Tor1b protein_coding retained_intron MGP_129S1SvImJ_T0053910.1 MGP_129S1SvImJ_G0025577.1 mouse_genomes_project 2 29249594 29255420 + MGP_129S1SvImJ_P0053910 Tor1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053911.1 MGP_129S1SvImJ_G0025577.1 mouse_genomes_project 2 29250159 29253281 + MGP_129S1SvImJ_P0053911 Tor1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053912.1 MGP_129S1SvImJ_G0025577.1 mouse_genomes_project 2 29251660 29253520 + Tor1b protein_coding processed_transcript MGP_129S1SvImJ_T0055873.1 MGP_129S1SvImJ_G0026067.1 mouse_genomes_project 2 89957892 89960105 + MGP_129S1SvImJ_P0055873 Olfr1201 protein_coding protein_coding MGP_129S1SvImJ_T0017777.1 MGP_129S1SvImJ_G0015401.1 mouse_genomes_project 2 24300911 24320316 + Gm13562 processed_transcript processed_transcript MGP_129S1SvImJ_T0017778.1 MGP_129S1SvImJ_G0015401.1 mouse_genomes_project 2 24313835 24318102 + Gm13562 processed_transcript processed_transcript MGP_129S1SvImJ_T0007356.1 MGP_129S1SvImJ_G0006034.1 mouse_genomes_project 2 152008630 152017732 + A530006G24Rik lincRNA lincRNA MGP_129S1SvImJ_T0100940.1 MGP_129S1SvImJ_G0039007.1 mouse_genomes_project 2 53506572 53506705 + Gm22298 snoRNA snoRNA MGP_129S1SvImJ_T0102451.1 MGP_129S1SvImJ_G0040285.1 mouse_genomes_project 2 183498013 183501012 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0098356.1 MGP_129S1SvImJ_G0036441.1 mouse_genomes_project 2 112940616 112940825 - pseudogene pseudogene MGP_129S1SvImJ_T0010363.1 MGP_129S1SvImJ_G0008479.1 mouse_genomes_project 2 7831904 7832870 + miRNA miRNA MGP_129S1SvImJ_T0017880.1 MGP_129S1SvImJ_G0015461.1 mouse_genomes_project 2 123106376 123107050 - Gm13997 processed_transcript processed_transcript MGP_129S1SvImJ_T0055080.1 MGP_129S1SvImJ_G0025786.1 mouse_genomes_project 2 66536343 66640939 - MGP_129S1SvImJ_P0055080 Scn7a protein_coding protein_coding MGP_129S1SvImJ_T0004006.1 MGP_129S1SvImJ_G0003572.1 mouse_genomes_project 2 65674841 65683053 - Gm13619 antisense antisense MGP_129S1SvImJ_T0013693.1 MGP_129S1SvImJ_G0011782.1 mouse_genomes_project 2 101263236 101263864 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013478.1 MGP_129S1SvImJ_G0011567.1 mouse_genomes_project 2 23440977 23441217 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055689.1 MGP_129S1SvImJ_G0025919.1 mouse_genomes_project 2 85704724 85744568 - MGP_129S1SvImJ_P0055689 P2rx3 protein_coding protein_coding MGP_129S1SvImJ_T0055690.1 MGP_129S1SvImJ_G0025919.1 mouse_genomes_project 2 85704783 85746543 - MGP_129S1SvImJ_P0055690 P2rx3 protein_coding protein_coding MGP_129S1SvImJ_T0055691.1 MGP_129S1SvImJ_G0025919.1 mouse_genomes_project 2 85704984 85744403 - MGP_129S1SvImJ_P0055691 P2rx3 protein_coding protein_coding MGP_129S1SvImJ_T0055692.1 MGP_129S1SvImJ_G0025919.1 mouse_genomes_project 2 85731032 85742391 - P2rx3 protein_coding processed_transcript MGP_129S1SvImJ_T0055693.1 MGP_129S1SvImJ_G0025919.1 mouse_genomes_project 2 85741134 85742275 - P2rx3 protein_coding processed_transcript MGP_129S1SvImJ_T0055836.1 MGP_129S1SvImJ_G0026032.1 mouse_genomes_project 2 88960669 88961626 + MGP_129S1SvImJ_P0055836 Olfr1153 protein_coding protein_coding MGP_129S1SvImJ_T0056693.1 MGP_129S1SvImJ_G0026294.1 mouse_genomes_project 2 115083664 115105075 - Ryr3 protein_coding processed_transcript MGP_129S1SvImJ_T0056694.1 MGP_129S1SvImJ_G0026294.1 mouse_genomes_project 2 115083673 115691346 - MGP_129S1SvImJ_P0056694 Ryr3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0056695.1 MGP_129S1SvImJ_G0026294.1 mouse_genomes_project 2 115083689 115491873 - MGP_129S1SvImJ_P0056695 Ryr3 protein_coding protein_coding MGP_129S1SvImJ_T0056696.1 MGP_129S1SvImJ_G0026294.1 mouse_genomes_project 2 115083689 115691407 - MGP_129S1SvImJ_P0056696 Ryr3 protein_coding protein_coding MGP_129S1SvImJ_T0056697.1 MGP_129S1SvImJ_G0026294.1 mouse_genomes_project 2 115084355 115691424 - Ryr3 protein_coding processed_transcript MGP_129S1SvImJ_T0056698.1 MGP_129S1SvImJ_G0026294.1 mouse_genomes_project 2 115088935 115092872 - Ryr3 protein_coding processed_transcript MGP_129S1SvImJ_T0056699.1 MGP_129S1SvImJ_G0026294.1 mouse_genomes_project 2 115316055 115367734 - Ryr3 protein_coding retained_intron MGP_129S1SvImJ_T0056700.1 MGP_129S1SvImJ_G0026294.1 mouse_genomes_project 2 115426945 115691418 - Ryr3 protein_coding retained_intron MGP_129S1SvImJ_T0056701.1 MGP_129S1SvImJ_G0026294.1 mouse_genomes_project 2 115457611 115691442 - Ryr3 protein_coding retained_intron MGP_129S1SvImJ_T0054001.1 MGP_129S1SvImJ_G0025590.1 mouse_genomes_project 2 30184900 30190979 - MGP_129S1SvImJ_P0054001 Qrfp protein_coding protein_coding MGP_129S1SvImJ_T0100971.1 MGP_129S1SvImJ_G0039038.1 mouse_genomes_project 2 133725933 133726019 + Gm23187 snoRNA snoRNA MGP_129S1SvImJ_T0013547.1 MGP_129S1SvImJ_G0011636.1 mouse_genomes_project 2 51685525 51686352 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059735.1 MGP_129S1SvImJ_G0026999.1 mouse_genomes_project 2 187154626 187175241 - MGP_129S1SvImJ_P0059735 Tcfl5 protein_coding protein_coding MGP_129S1SvImJ_T0059736.1 MGP_129S1SvImJ_G0026999.1 mouse_genomes_project 2 187155262 187174916 - MGP_129S1SvImJ_P0059736 Tcfl5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0059737.1 MGP_129S1SvImJ_G0026999.1 mouse_genomes_project 2 187167916 187175241 - MGP_129S1SvImJ_P0059737 Tcfl5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059738.1 MGP_129S1SvImJ_G0026999.1 mouse_genomes_project 2 187170128 187175012 - Tcfl5 protein_coding retained_intron MGP_129S1SvImJ_T0099666.1 MGP_129S1SvImJ_G0037733.1 mouse_genomes_project 2 31069498 31069603 - Gm23369 snRNA snRNA MGP_129S1SvImJ_T0004063.1 MGP_129S1SvImJ_G0003609.1 mouse_genomes_project 2 107226066 107239411 - Wt1os antisense antisense MGP_129S1SvImJ_T0004064.1 MGP_129S1SvImJ_G0003609.1 mouse_genomes_project 2 107226389 107277326 - Wt1os antisense antisense MGP_129S1SvImJ_T0004065.1 MGP_129S1SvImJ_G0003609.1 mouse_genomes_project 2 107227439 107227640 - Wt1os antisense antisense MGP_129S1SvImJ_T0004066.1 MGP_129S1SvImJ_G0003609.1 mouse_genomes_project 2 107243177 107277219 - Wt1os antisense antisense MGP_129S1SvImJ_T0013484.1 MGP_129S1SvImJ_G0011573.1 mouse_genomes_project 2 26877962 26878182 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059939.1 MGP_129S1SvImJ_G0027033.1 mouse_genomes_project 2 188303044 188310083 + Tcea2 protein_coding retained_intron MGP_129S1SvImJ_T0059940.1 MGP_129S1SvImJ_G0027033.1 mouse_genomes_project 2 188303044 188310807 + MGP_129S1SvImJ_P0059940 Tcea2 protein_coding protein_coding MGP_129S1SvImJ_T0059941.1 MGP_129S1SvImJ_G0027033.1 mouse_genomes_project 2 188303924 188310787 + MGP_129S1SvImJ_P0059941 Tcea2 protein_coding protein_coding MGP_129S1SvImJ_T0059942.1 MGP_129S1SvImJ_G0027033.1 mouse_genomes_project 2 188305619 188310781 + MGP_129S1SvImJ_P0059942 Tcea2 protein_coding protein_coding MGP_129S1SvImJ_T0059943.1 MGP_129S1SvImJ_G0027033.1 mouse_genomes_project 2 188305900 188309028 + Tcea2 protein_coding processed_transcript MGP_129S1SvImJ_T0059944.1 MGP_129S1SvImJ_G0027033.1 mouse_genomes_project 2 188306309 188310647 + Tcea2 protein_coding retained_intron MGP_129S1SvImJ_T0059945.1 MGP_129S1SvImJ_G0027033.1 mouse_genomes_project 2 188306335 188309670 + Tcea2 protein_coding retained_intron MGP_129S1SvImJ_T0059946.1 MGP_129S1SvImJ_G0027033.1 mouse_genomes_project 2 188310251 188310798 + Tcea2 protein_coding processed_transcript MGP_129S1SvImJ_T0007288.1 MGP_129S1SvImJ_G0005978.1 mouse_genomes_project 2 105358216 105369510 - BC016548 lincRNA lincRNA MGP_129S1SvImJ_T0007289.1 MGP_129S1SvImJ_G0005978.1 mouse_genomes_project 2 105364444 105369508 - BC016548 lincRNA lincRNA MGP_129S1SvImJ_T0057404.1 MGP_129S1SvImJ_G0026440.1 mouse_genomes_project 2 129769806 129811030 + MGP_129S1SvImJ_P0057404 Slc27a2 protein_coding protein_coding MGP_129S1SvImJ_T0057405.1 MGP_129S1SvImJ_G0026440.1 mouse_genomes_project 2 129770989 129783239 + Slc27a2 protein_coding processed_transcript MGP_129S1SvImJ_T0057406.1 MGP_129S1SvImJ_G0026440.1 mouse_genomes_project 2 129773527 129810722 + MGP_129S1SvImJ_P0057406 Slc27a2 protein_coding protein_coding MGP_129S1SvImJ_T0057407.1 MGP_129S1SvImJ_G0026440.1 mouse_genomes_project 2 129783313 129794044 + Slc27a2 protein_coding processed_transcript MGP_129S1SvImJ_T0013539.1 MGP_129S1SvImJ_G0011628.1 mouse_genomes_project 2 49760763 49761626 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058344.1 MGP_129S1SvImJ_G0026679.1 mouse_genomes_project 2 157435416 157493828 + MGP_129S1SvImJ_P0058344 Tpx2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0058345.1 MGP_129S1SvImJ_G0026679.1 mouse_genomes_project 2 157435425 157444067 + Tpx2 protein_coding processed_transcript MGP_129S1SvImJ_T0058346.1 MGP_129S1SvImJ_G0026679.1 mouse_genomes_project 2 157459510 157474488 + Tpx2 protein_coding retained_intron MGP_129S1SvImJ_T0058347.1 MGP_129S1SvImJ_G0026679.1 mouse_genomes_project 2 157475687 157479860 + Tpx2 protein_coding retained_intron MGP_129S1SvImJ_T0017789.1 MGP_129S1SvImJ_G0015408.1 mouse_genomes_project 2 27902445 27904779 - processed_transcript processed_transcript MGP_129S1SvImJ_T0013864.1 MGP_129S1SvImJ_G0011953.1 mouse_genomes_project 2 165001527 165002393 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059990.1 MGP_129S1SvImJ_G0027042.1 mouse_genomes_project 2 188625514 188644809 + MGP_129S1SvImJ_P0059990 protein_coding protein_coding MGP_129S1SvImJ_T0010427.1 MGP_129S1SvImJ_G0008543.1 mouse_genomes_project 2 37630971 37631060 + Mir181b-2 miRNA miRNA MGP_129S1SvImJ_T0055615.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85281972 85333225 - MGP_129S1SvImJ_P0055615 protein_coding protein_coding MGP_129S1SvImJ_T0055616.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85281972 85333225 - MGP_129S1SvImJ_P0055616 protein_coding protein_coding MGP_129S1SvImJ_T0055617.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85281972 85333225 - MGP_129S1SvImJ_P0055617 protein_coding protein_coding MGP_129S1SvImJ_T0055618.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85281972 85333225 - MGP_129S1SvImJ_P0055618 protein_coding protein_coding MGP_129S1SvImJ_T0055619.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85281972 85333225 - MGP_129S1SvImJ_P0055619 protein_coding protein_coding MGP_129S1SvImJ_T0055620.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85281974 85333225 - MGP_129S1SvImJ_P0055620 protein_coding protein_coding MGP_129S1SvImJ_T0055621.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85281974 85333225 - MGP_129S1SvImJ_P0055621 protein_coding protein_coding MGP_129S1SvImJ_T0055622.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85281974 85333225 - MGP_129S1SvImJ_P0055622 protein_coding protein_coding MGP_129S1SvImJ_T0055623.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85281974 85333156 - MGP_129S1SvImJ_P0055623 protein_coding protein_coding MGP_129S1SvImJ_T0055624.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85281974 85333225 - MGP_129S1SvImJ_P0055624 protein_coding protein_coding MGP_129S1SvImJ_T0055625.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85282001 85333225 - MGP_129S1SvImJ_P0055625 protein_coding protein_coding MGP_129S1SvImJ_T0055626.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85282682 85333220 - MGP_129S1SvImJ_P0055626 protein_coding protein_coding MGP_129S1SvImJ_T0055627.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85282684 85333020 - protein_coding processed_transcript MGP_129S1SvImJ_T0055628.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85282684 85333245 - MGP_129S1SvImJ_P0055628 protein_coding protein_coding MGP_129S1SvImJ_T0055629.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85282684 85331960 - MGP_129S1SvImJ_P0055629 protein_coding protein_coding MGP_129S1SvImJ_T0055630.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85282684 85332990 - MGP_129S1SvImJ_P0055630 protein_coding protein_coding MGP_129S1SvImJ_T0055632.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85284434 85292297 - protein_coding processed_transcript MGP_129S1SvImJ_T0055633.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85284530 85292317 - protein_coding processed_transcript MGP_129S1SvImJ_T0055634.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85284793 85333223 - MGP_129S1SvImJ_P0055634 protein_coding protein_coding MGP_129S1SvImJ_T0055635.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85291606 85295205 - protein_coding processed_transcript MGP_129S1SvImJ_T0055636.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85307040 85320662 - protein_coding processed_transcript MGP_129S1SvImJ_T0055637.1 MGP_129S1SvImJ_G0025900.1 mouse_genomes_project 2 85307079 85331017 - protein_coding processed_transcript MGP_129S1SvImJ_T0057873.1 MGP_129S1SvImJ_G0026546.1 mouse_genomes_project 2 136432051 136438467 - Trmt6 protein_coding retained_intron MGP_129S1SvImJ_T0057874.1 MGP_129S1SvImJ_G0026546.1 mouse_genomes_project 2 136432051 136443900 - Trmt6 protein_coding processed_transcript MGP_129S1SvImJ_T0057875.1 MGP_129S1SvImJ_G0026546.1 mouse_genomes_project 2 136432051 136443899 - MGP_129S1SvImJ_P0057875 Trmt6 protein_coding protein_coding MGP_129S1SvImJ_T0057876.1 MGP_129S1SvImJ_G0026546.1 mouse_genomes_project 2 136438248 136443603 - Trmt6 protein_coding processed_transcript MGP_129S1SvImJ_T0057877.1 MGP_129S1SvImJ_G0026546.1 mouse_genomes_project 2 136438273 136440347 - Trmt6 protein_coding processed_transcript MGP_129S1SvImJ_T0057878.1 MGP_129S1SvImJ_G0026546.1 mouse_genomes_project 2 136439605 136443858 - Trmt6 protein_coding processed_transcript MGP_129S1SvImJ_T0013507.1 MGP_129S1SvImJ_G0011596.1 mouse_genomes_project 2 36371153 36371529 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013738.1 MGP_129S1SvImJ_G0011827.1 mouse_genomes_project 2 114359568 114361321 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059053.1 MGP_129S1SvImJ_G0026822.1 mouse_genomes_project 2 168785771 168802562 + MGP_129S1SvImJ_P0059053 Gdap1l1 protein_coding protein_coding MGP_129S1SvImJ_T0059054.1 MGP_129S1SvImJ_G0026822.1 mouse_genomes_project 2 168785773 168802213 + MGP_129S1SvImJ_P0059054 Gdap1l1 protein_coding protein_coding MGP_129S1SvImJ_T0059055.1 MGP_129S1SvImJ_G0026822.1 mouse_genomes_project 2 168785773 168801193 + MGP_129S1SvImJ_P0059055 Gdap1l1 protein_coding protein_coding MGP_129S1SvImJ_T0059056.1 MGP_129S1SvImJ_G0026822.1 mouse_genomes_project 2 168785828 168801035 + MGP_129S1SvImJ_P0059056 Gdap1l1 protein_coding protein_coding MGP_129S1SvImJ_T0102397.1 MGP_129S1SvImJ_G0040231.1 mouse_genomes_project 2 86357697 86358619 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099687.1 MGP_129S1SvImJ_G0037754.1 mouse_genomes_project 2 112568243 112568350 + Gm22997 snRNA snRNA MGP_129S1SvImJ_T0013482.1 MGP_129S1SvImJ_G0011571.1 mouse_genomes_project 2 24687341 24688035 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013890.1 MGP_129S1SvImJ_G0011979.1 mouse_genomes_project 2 178250964 178251579 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054256.1 MGP_129S1SvImJ_G0025629.1 mouse_genomes_project 2 31476316 31487500 - Slc2a8 protein_coding retained_intron MGP_129S1SvImJ_T0054257.1 MGP_129S1SvImJ_G0025629.1 mouse_genomes_project 2 31476316 31487514 - MGP_129S1SvImJ_P0054257 Slc2a8 protein_coding protein_coding MGP_129S1SvImJ_T0054258.1 MGP_129S1SvImJ_G0025629.1 mouse_genomes_project 2 31476911 31487449 - MGP_129S1SvImJ_P0054258 Slc2a8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054259.1 MGP_129S1SvImJ_G0025629.1 mouse_genomes_project 2 31476911 31487449 - MGP_129S1SvImJ_P0054259 Slc2a8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054260.1 MGP_129S1SvImJ_G0025629.1 mouse_genomes_project 2 31476911 31487449 - MGP_129S1SvImJ_P0054260 Slc2a8 protein_coding protein_coding MGP_129S1SvImJ_T0054261.1 MGP_129S1SvImJ_G0025629.1 mouse_genomes_project 2 31479253 31487503 - MGP_129S1SvImJ_P0054261 Slc2a8 protein_coding protein_coding MGP_129S1SvImJ_T0054262.1 MGP_129S1SvImJ_G0025629.1 mouse_genomes_project 2 31480237 31487451 - Slc2a8 protein_coding retained_intron MGP_129S1SvImJ_T0054263.1 MGP_129S1SvImJ_G0025629.1 mouse_genomes_project 2 31486917 31487515 - Slc2a8 protein_coding processed_transcript MGP_129S1SvImJ_T0102429.1 MGP_129S1SvImJ_G0040263.1 mouse_genomes_project 2 89779735 89780636 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0052344.1 MGP_129S1SvImJ_G0025312.1 mouse_genomes_project 2 617501 801081 + MGP_129S1SvImJ_P0052344 Fam107b protein_coding protein_coding MGP_129S1SvImJ_T0052345.1 MGP_129S1SvImJ_G0025312.1 mouse_genomes_project 2 726812 803413 + MGP_129S1SvImJ_P0052345 Fam107b protein_coding protein_coding MGP_129S1SvImJ_T0052346.1 MGP_129S1SvImJ_G0025312.1 mouse_genomes_project 2 726832 801215 + MGP_129S1SvImJ_P0052346 Fam107b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052347.1 MGP_129S1SvImJ_G0025312.1 mouse_genomes_project 2 792064 794328 + MGP_129S1SvImJ_P0052347 Fam107b protein_coding protein_coding MGP_129S1SvImJ_T0052348.1 MGP_129S1SvImJ_G0025312.1 mouse_genomes_project 2 792090 803411 + MGP_129S1SvImJ_P0052348 Fam107b protein_coding protein_coding MGP_129S1SvImJ_T0052349.1 MGP_129S1SvImJ_G0025312.1 mouse_genomes_project 2 795302 800919 + MGP_129S1SvImJ_P0052349 Fam107b protein_coding protein_coding MGP_129S1SvImJ_T0055017.1 MGP_129S1SvImJ_G0025777.1 mouse_genomes_project 2 64870661 65028624 - MGP_129S1SvImJ_P0055017 Cobll1 protein_coding protein_coding MGP_129S1SvImJ_T0055018.1 MGP_129S1SvImJ_G0025777.1 mouse_genomes_project 2 64870672 65028719 - MGP_129S1SvImJ_P0055018 Cobll1 protein_coding protein_coding MGP_129S1SvImJ_T0055019.1 MGP_129S1SvImJ_G0025777.1 mouse_genomes_project 2 64870672 65028571 - MGP_129S1SvImJ_P0055019 Cobll1 protein_coding protein_coding MGP_129S1SvImJ_T0055020.1 MGP_129S1SvImJ_G0025777.1 mouse_genomes_project 2 64870672 65028624 - MGP_129S1SvImJ_P0055020 Cobll1 protein_coding protein_coding MGP_129S1SvImJ_T0055021.1 MGP_129S1SvImJ_G0025777.1 mouse_genomes_project 2 64870672 65028624 - MGP_129S1SvImJ_P0055021 Cobll1 protein_coding protein_coding MGP_129S1SvImJ_T0055022.1 MGP_129S1SvImJ_G0025777.1 mouse_genomes_project 2 64881502 64888185 - Cobll1 protein_coding processed_transcript MGP_129S1SvImJ_T0055023.1 MGP_129S1SvImJ_G0025777.1 mouse_genomes_project 2 64910816 65029042 - MGP_129S1SvImJ_P0055023 Cobll1 protein_coding protein_coding MGP_129S1SvImJ_T0055024.1 MGP_129S1SvImJ_G0025777.1 mouse_genomes_project 2 64918615 65029094 - MGP_129S1SvImJ_P0055024 Cobll1 protein_coding protein_coding MGP_129S1SvImJ_T0055025.1 MGP_129S1SvImJ_G0025777.1 mouse_genomes_project 2 64921187 65026095 - Cobll1 protein_coding processed_transcript MGP_129S1SvImJ_T0055026.1 MGP_129S1SvImJ_G0025777.1 mouse_genomes_project 2 64921220 65028571 - MGP_129S1SvImJ_P0055026 Cobll1 protein_coding protein_coding MGP_129S1SvImJ_T0055027.1 MGP_129S1SvImJ_G0025777.1 mouse_genomes_project 2 64935342 65029045 - Cobll1 protein_coding processed_transcript MGP_129S1SvImJ_T0055028.1 MGP_129S1SvImJ_G0025777.1 mouse_genomes_project 2 64937898 65029401 - Cobll1 protein_coding processed_transcript MGP_129S1SvImJ_T0055029.1 MGP_129S1SvImJ_G0025777.1 mouse_genomes_project 2 64938062 65028472 - Cobll1 protein_coding processed_transcript MGP_129S1SvImJ_T0013427.1 MGP_129S1SvImJ_G0011516.1 mouse_genomes_project 2 2719709 2720265 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003985.1 MGP_129S1SvImJ_G0003557.1 mouse_genomes_project 2 37477257 37485213 + Nr5a1os antisense antisense MGP_129S1SvImJ_T0011543.1 MGP_129S1SvImJ_G0009659.1 mouse_genomes_project 2 172344123 172344470 + Gm25265 misc_RNA misc_RNA MGP_129S1SvImJ_T0001090.1 MGP_129S1SvImJ_G0001019.1 mouse_genomes_project 2 34745025 34748197 - TEC TEC MGP_129S1SvImJ_T0059390.1 MGP_129S1SvImJ_G0026908.1 mouse_genomes_project 2 172762488 172765211 + protein_coding antisense MGP_129S1SvImJ_T0059391.1 MGP_129S1SvImJ_G0026908.1 mouse_genomes_project 2 172762488 172765210 + MGP_129S1SvImJ_P0059391 protein_coding protein_coding MGP_129S1SvImJ_T0059392.1 MGP_129S1SvImJ_G0026908.1 mouse_genomes_project 2 172762489 172764923 + protein_coding retained_intron MGP_129S1SvImJ_T0059393.1 MGP_129S1SvImJ_G0026908.1 mouse_genomes_project 2 172762775 172764731 + protein_coding retained_intron MGP_129S1SvImJ_T0059394.1 MGP_129S1SvImJ_G0026908.1 mouse_genomes_project 2 172762777 172765071 + protein_coding retained_intron MGP_129S1SvImJ_T0059395.1 MGP_129S1SvImJ_G0026908.1 mouse_genomes_project 2 172763203 172765211 + protein_coding retained_intron MGP_129S1SvImJ_T0059173.1 MGP_129S1SvImJ_G0026869.1 mouse_genomes_project 2 170224334 170240411 - MGP_129S1SvImJ_P0059173 Wfdc3 protein_coding protein_coding MGP_129S1SvImJ_T0059174.1 MGP_129S1SvImJ_G0026869.1 mouse_genomes_project 2 170224334 170237793 - MGP_129S1SvImJ_P0059174 Wfdc3 protein_coding protein_coding MGP_129S1SvImJ_T0059175.1 MGP_129S1SvImJ_G0026869.1 mouse_genomes_project 2 170238044 170240411 - Wfdc3 protein_coding processed_transcript MGP_129S1SvImJ_T0007191.1 MGP_129S1SvImJ_G0005899.1 mouse_genomes_project 2 34904907 34905633 + Gm13431 lincRNA lincRNA MGP_129S1SvImJ_T0007192.1 MGP_129S1SvImJ_G0005899.1 mouse_genomes_project 2 34904955 34911084 + Gm13431 lincRNA lincRNA MGP_129S1SvImJ_T0007193.1 MGP_129S1SvImJ_G0005899.1 mouse_genomes_project 2 34908625 34911016 + Gm13431 lincRNA lincRNA MGP_129S1SvImJ_T0057063.1 MGP_129S1SvImJ_G0026370.1 mouse_genomes_project 2 123471807 123477099 - MGP_129S1SvImJ_P0057063 Lrrc57 protein_coding protein_coding MGP_129S1SvImJ_T0057064.1 MGP_129S1SvImJ_G0026370.1 mouse_genomes_project 2 123471807 123476934 - MGP_129S1SvImJ_P0057064 Lrrc57 protein_coding protein_coding MGP_129S1SvImJ_T0057065.1 MGP_129S1SvImJ_G0026370.1 mouse_genomes_project 2 123471807 123477089 - MGP_129S1SvImJ_P0057065 Lrrc57 protein_coding protein_coding MGP_129S1SvImJ_T0057066.1 MGP_129S1SvImJ_G0026370.1 mouse_genomes_project 2 123471807 123476894 - MGP_129S1SvImJ_P0057066 Lrrc57 protein_coding protein_coding MGP_129S1SvImJ_T0057067.1 MGP_129S1SvImJ_G0026370.1 mouse_genomes_project 2 123472389 123475551 - MGP_129S1SvImJ_P0057067 Lrrc57 protein_coding protein_coding MGP_129S1SvImJ_T0057068.1 MGP_129S1SvImJ_G0026370.1 mouse_genomes_project 2 123473562 123477087 - MGP_129S1SvImJ_P0057068 Lrrc57 protein_coding protein_coding MGP_129S1SvImJ_T0057069.1 MGP_129S1SvImJ_G0026370.1 mouse_genomes_project 2 123476396 123476881 - Lrrc57 protein_coding retained_intron MGP_129S1SvImJ_T0057237.1 MGP_129S1SvImJ_G0026396.1 mouse_genomes_project 2 124365636 124389561 - MGP_129S1SvImJ_P0057237 protein_coding protein_coding MGP_129S1SvImJ_T0013552.1 MGP_129S1SvImJ_G0011641.1 mouse_genomes_project 2 53670509 53671326 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053289.1 MGP_129S1SvImJ_G0025477.1 mouse_genomes_project 2 23997316 24034857 - MGP_129S1SvImJ_P0053289 Nacc2 protein_coding protein_coding MGP_129S1SvImJ_T0053290.1 MGP_129S1SvImJ_G0025477.1 mouse_genomes_project 2 23997316 24066835 - MGP_129S1SvImJ_P0053290 Nacc2 protein_coding protein_coding MGP_129S1SvImJ_T0053291.1 MGP_129S1SvImJ_G0025477.1 mouse_genomes_project 2 24002845 24004272 - Nacc2 protein_coding processed_transcript MGP_129S1SvImJ_T0053292.1 MGP_129S1SvImJ_G0025477.1 mouse_genomes_project 2 24006151 24034499 - Nacc2 protein_coding processed_transcript MGP_129S1SvImJ_T0053293.1 MGP_129S1SvImJ_G0025477.1 mouse_genomes_project 2 24006273 24033055 - Nacc2 protein_coding processed_transcript MGP_129S1SvImJ_T0053294.1 MGP_129S1SvImJ_G0025477.1 mouse_genomes_project 2 24032486 24067237 - Nacc2 protein_coding processed_transcript MGP_129S1SvImJ_T0053295.1 MGP_129S1SvImJ_G0025477.1 mouse_genomes_project 2 24032765 24066800 - MGP_129S1SvImJ_P0053295 Nacc2 protein_coding protein_coding MGP_129S1SvImJ_T0053296.1 MGP_129S1SvImJ_G0025477.1 mouse_genomes_project 2 24033007 24066805 - Nacc2 protein_coding processed_transcript MGP_129S1SvImJ_T0058923.1 MGP_129S1SvImJ_G0026794.1 mouse_genomes_project 2 163486167 163576728 + MGP_129S1SvImJ_P0058923 Ralgapb protein_coding protein_coding MGP_129S1SvImJ_T0058924.1 MGP_129S1SvImJ_G0026794.1 mouse_genomes_project 2 163486172 163576728 + MGP_129S1SvImJ_P0058924 Ralgapb protein_coding protein_coding MGP_129S1SvImJ_T0058925.1 MGP_129S1SvImJ_G0026794.1 mouse_genomes_project 2 163486195 163504365 + Ralgapb protein_coding retained_intron MGP_129S1SvImJ_T0058926.1 MGP_129S1SvImJ_G0026794.1 mouse_genomes_project 2 163486198 163515945 + Ralgapb protein_coding retained_intron MGP_129S1SvImJ_T0058927.1 MGP_129S1SvImJ_G0026794.1 mouse_genomes_project 2 163486201 163519589 + Ralgapb protein_coding processed_transcript MGP_129S1SvImJ_T0058928.1 MGP_129S1SvImJ_G0026794.1 mouse_genomes_project 2 163486270 163575121 + MGP_129S1SvImJ_P0058928 Ralgapb protein_coding protein_coding MGP_129S1SvImJ_T0058929.1 MGP_129S1SvImJ_G0026794.1 mouse_genomes_project 2 163486421 163497211 + MGP_129S1SvImJ_P0058929 Ralgapb protein_coding protein_coding MGP_129S1SvImJ_T0058930.1 MGP_129S1SvImJ_G0026794.1 mouse_genomes_project 2 163512852 163576728 + MGP_129S1SvImJ_P0058930 Ralgapb protein_coding protein_coding MGP_129S1SvImJ_T0058931.1 MGP_129S1SvImJ_G0026794.1 mouse_genomes_project 2 163542317 163550978 + Ralgapb protein_coding retained_intron MGP_129S1SvImJ_T0058932.1 MGP_129S1SvImJ_G0026794.1 mouse_genomes_project 2 163555275 163562245 + Ralgapb protein_coding processed_transcript MGP_129S1SvImJ_T0052724.1 MGP_129S1SvImJ_G0025372.1 mouse_genomes_project 2 15709697 15713594 - Skida1 protein_coding processed_transcript MGP_129S1SvImJ_T0052725.1 MGP_129S1SvImJ_G0025372.1 mouse_genomes_project 2 15713104 15718077 - MGP_129S1SvImJ_P0052725 Skida1 protein_coding protein_coding MGP_129S1SvImJ_T0052726.1 MGP_129S1SvImJ_G0025372.1 mouse_genomes_project 2 15714274 15717471 - MGP_129S1SvImJ_P0052726 Skida1 protein_coding protein_coding MGP_129S1SvImJ_T0052727.1 MGP_129S1SvImJ_G0025372.1 mouse_genomes_project 2 15716737 15717810 - MGP_129S1SvImJ_P0052727 Skida1 protein_coding protein_coding MGP_129S1SvImJ_T0052728.1 MGP_129S1SvImJ_G0025372.1 mouse_genomes_project 2 15717165 15718057 - MGP_129S1SvImJ_P0052728 Skida1 protein_coding protein_coding MGP_129S1SvImJ_T0058388.1 MGP_129S1SvImJ_G0026689.1 mouse_genomes_project 2 157843839 157858686 - MGP_129S1SvImJ_P0058388 Plagl2 protein_coding protein_coding MGP_129S1SvImJ_T0058389.1 MGP_129S1SvImJ_G0026689.1 mouse_genomes_project 2 157843852 157854017 - MGP_129S1SvImJ_P0058389 Plagl2 protein_coding protein_coding MGP_129S1SvImJ_T0056817.1 MGP_129S1SvImJ_G0026323.1 mouse_genomes_project 2 121483885 121516192 + MGP_129S1SvImJ_P0056817 Disp2 protein_coding protein_coding MGP_129S1SvImJ_T0056818.1 MGP_129S1SvImJ_G0026323.1 mouse_genomes_project 2 121483888 121499363 + MGP_129S1SvImJ_P0056818 Disp2 protein_coding protein_coding MGP_129S1SvImJ_T0056819.1 MGP_129S1SvImJ_G0026323.1 mouse_genomes_project 2 121483905 121516311 + MGP_129S1SvImJ_P0056819 Disp2 protein_coding protein_coding MGP_129S1SvImJ_T0056820.1 MGP_129S1SvImJ_G0026323.1 mouse_genomes_project 2 121483908 121494234 + MGP_129S1SvImJ_P0056820 Disp2 protein_coding protein_coding MGP_129S1SvImJ_T0056821.1 MGP_129S1SvImJ_G0026323.1 mouse_genomes_project 2 121483925 121494233 + Disp2 protein_coding retained_intron MGP_129S1SvImJ_T0056586.1 MGP_129S1SvImJ_G0026238.1 mouse_genomes_project 2 111412463 111605917 - MGP_129S1SvImJ_P0056586 Mettl15 protein_coding protein_coding MGP_129S1SvImJ_T0056587.1 MGP_129S1SvImJ_G0026238.1 mouse_genomes_project 2 111412466 111605907 - Mettl15 protein_coding processed_transcript MGP_129S1SvImJ_T0056588.1 MGP_129S1SvImJ_G0026238.1 mouse_genomes_project 2 111447009 111608375 - MGP_129S1SvImJ_P0056588 Mettl15 protein_coding protein_coding MGP_129S1SvImJ_T0056589.1 MGP_129S1SvImJ_G0026238.1 mouse_genomes_project 2 111560951 111608353 - Mettl15 protein_coding retained_intron MGP_129S1SvImJ_T0056590.1 MGP_129S1SvImJ_G0026238.1 mouse_genomes_project 2 111561016 111608329 - Mettl15 protein_coding processed_transcript MGP_129S1SvImJ_T0053408.1 MGP_129S1SvImJ_G0025494.1 mouse_genomes_project 2 24601000 24609041 + MGP_129S1SvImJ_P0053408 Fam69b protein_coding protein_coding MGP_129S1SvImJ_T0053409.1 MGP_129S1SvImJ_G0025494.1 mouse_genomes_project 2 24601037 24605551 + Fam69b protein_coding processed_transcript MGP_129S1SvImJ_T0053410.1 MGP_129S1SvImJ_G0025494.1 mouse_genomes_project 2 24606746 24607569 + Fam69b protein_coding processed_transcript MGP_129S1SvImJ_T0055727.1 MGP_129S1SvImJ_G0025936.1 mouse_genomes_project 2 86548349 86549267 + MGP_129S1SvImJ_P0055727 Olfr1013 protein_coding protein_coding MGP_129S1SvImJ_T0059812.1 MGP_129S1SvImJ_G0027012.1 mouse_genomes_project 2 187762556 187764081 + MGP_129S1SvImJ_P0059812 Ppdpf protein_coding protein_coding MGP_129S1SvImJ_T0059813.1 MGP_129S1SvImJ_G0027012.1 mouse_genomes_project 2 187762605 187764051 + Ppdpf protein_coding retained_intron MGP_129S1SvImJ_T0059814.1 MGP_129S1SvImJ_G0027012.1 mouse_genomes_project 2 187762645 187763814 + MGP_129S1SvImJ_P0059814 Ppdpf protein_coding protein_coding MGP_129S1SvImJ_T0059815.1 MGP_129S1SvImJ_G0027012.1 mouse_genomes_project 2 187762656 187763814 + Ppdpf protein_coding retained_intron MGP_129S1SvImJ_T0059816.1 MGP_129S1SvImJ_G0027012.1 mouse_genomes_project 2 187762845 187763814 + Ppdpf protein_coding retained_intron MGP_129S1SvImJ_T0059817.1 MGP_129S1SvImJ_G0027012.1 mouse_genomes_project 2 187763223 187763814 + Ppdpf protein_coding retained_intron MGP_129S1SvImJ_T0054805.1 MGP_129S1SvImJ_G0025740.1 mouse_genomes_project 2 53488667 53490127 - MGP_129S1SvImJ_P0054805 Rprm protein_coding protein_coding MGP_129S1SvImJ_T0058639.1 MGP_129S1SvImJ_G0026750.1 mouse_genomes_project 2 160812389 160844331 + Cep250 protein_coding retained_intron MGP_129S1SvImJ_T0058640.1 MGP_129S1SvImJ_G0026750.1 mouse_genomes_project 2 160812494 160856647 + MGP_129S1SvImJ_P0058640 Cep250 protein_coding protein_coding MGP_129S1SvImJ_T0058641.1 MGP_129S1SvImJ_G0026750.1 mouse_genomes_project 2 160812494 160856647 + MGP_129S1SvImJ_P0058641 Cep250 protein_coding protein_coding MGP_129S1SvImJ_T0058642.1 MGP_129S1SvImJ_G0026750.1 mouse_genomes_project 2 160812494 160856647 + MGP_129S1SvImJ_P0058642 Cep250 protein_coding protein_coding MGP_129S1SvImJ_T0058643.1 MGP_129S1SvImJ_G0026750.1 mouse_genomes_project 2 160812508 160831761 + MGP_129S1SvImJ_P0058643 Cep250 protein_coding protein_coding MGP_129S1SvImJ_T0058644.1 MGP_129S1SvImJ_G0026750.1 mouse_genomes_project 2 160812530 160825159 + MGP_129S1SvImJ_P0058644 Cep250 protein_coding protein_coding MGP_129S1SvImJ_T0058646.1 MGP_129S1SvImJ_G0026750.1 mouse_genomes_project 2 160833693 160856647 + Cep250 protein_coding retained_intron MGP_129S1SvImJ_T0058647.1 MGP_129S1SvImJ_G0026750.1 mouse_genomes_project 2 160836833 160838723 + Cep250 protein_coding retained_intron MGP_129S1SvImJ_T0058648.1 MGP_129S1SvImJ_G0026750.1 mouse_genomes_project 2 160843600 160847311 + MGP_129S1SvImJ_P0058648 Cep250 protein_coding protein_coding MGP_129S1SvImJ_T0058649.1 MGP_129S1SvImJ_G0026750.1 mouse_genomes_project 2 160843632 160848304 + MGP_129S1SvImJ_P0058649 Cep250 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0013649.1 MGP_129S1SvImJ_G0011738.1 mouse_genomes_project 2 86528371 86529311 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010426.1 MGP_129S1SvImJ_G0008542.1 mouse_genomes_project 2 37629876 37629952 + Mir181a-2 miRNA miRNA MGP_129S1SvImJ_T0010499.1 MGP_129S1SvImJ_G0008615.1 mouse_genomes_project 2 179102097 179102175 - Gm22773 miRNA miRNA MGP_129S1SvImJ_T0055058.1 MGP_129S1SvImJ_G0025782.1 mouse_genomes_project 2 65918702 65962652 - MGP_129S1SvImJ_P0055058 Galnt3 protein_coding protein_coding MGP_129S1SvImJ_T0055059.1 MGP_129S1SvImJ_G0025782.1 mouse_genomes_project 2 65920022 65932435 - Galnt3 protein_coding processed_transcript MGP_129S1SvImJ_T0055060.1 MGP_129S1SvImJ_G0025782.1 mouse_genomes_project 2 65928372 65931282 - Galnt3 protein_coding processed_transcript MGP_129S1SvImJ_T0055061.1 MGP_129S1SvImJ_G0025782.1 mouse_genomes_project 2 65932851 65939728 - Galnt3 protein_coding processed_transcript MGP_129S1SvImJ_T0100987.1 MGP_129S1SvImJ_G0039054.1 mouse_genomes_project 2 160488970 160489103 - Gm22334 snoRNA snoRNA MGP_129S1SvImJ_T0056778.1 MGP_129S1SvImJ_G0026314.1 mouse_genomes_project 2 121073478 121114476 + MGP_129S1SvImJ_P0056778 Eif2ak4 protein_coding protein_coding MGP_129S1SvImJ_T0056779.1 MGP_129S1SvImJ_G0026314.1 mouse_genomes_project 2 121073569 121160891 + MGP_129S1SvImJ_P0056779 Eif2ak4 protein_coding protein_coding MGP_129S1SvImJ_T0056780.1 MGP_129S1SvImJ_G0026314.1 mouse_genomes_project 2 121073707 121160883 + MGP_129S1SvImJ_P0056780 Eif2ak4 protein_coding protein_coding MGP_129S1SvImJ_T0056781.1 MGP_129S1SvImJ_G0026314.1 mouse_genomes_project 2 121073972 121160881 + MGP_129S1SvImJ_P0056781 Eif2ak4 protein_coding protein_coding MGP_129S1SvImJ_T0056782.1 MGP_129S1SvImJ_G0026314.1 mouse_genomes_project 2 121073972 121160880 + MGP_129S1SvImJ_P0056782 Eif2ak4 protein_coding protein_coding MGP_129S1SvImJ_T0056783.1 MGP_129S1SvImJ_G0026314.1 mouse_genomes_project 2 121125167 121137516 + MGP_129S1SvImJ_P0056783 Eif2ak4 protein_coding protein_coding MGP_129S1SvImJ_T0056784.1 MGP_129S1SvImJ_G0026314.1 mouse_genomes_project 2 121142340 121147105 + Eif2ak4 protein_coding processed_transcript MGP_129S1SvImJ_T0013512.1 MGP_129S1SvImJ_G0011601.1 mouse_genomes_project 2 37966263 37966989 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057872.1 MGP_129S1SvImJ_G0026545.1 mouse_genomes_project 2 136406851 136422834 + MGP_129S1SvImJ_P0057872 Chgb protein_coding protein_coding MGP_129S1SvImJ_T0056176.1 MGP_129S1SvImJ_G0026159.1 mouse_genomes_project 2 93313687 93315569 - MGP_129S1SvImJ_P0056176 Mdk protein_coding protein_coding MGP_129S1SvImJ_T0056177.1 MGP_129S1SvImJ_G0026159.1 mouse_genomes_project 2 93313710 93316154 - MGP_129S1SvImJ_P0056177 Mdk protein_coding protein_coding MGP_129S1SvImJ_T0056178.1 MGP_129S1SvImJ_G0026159.1 mouse_genomes_project 2 93313710 93315661 - MGP_129S1SvImJ_P0056178 Mdk protein_coding protein_coding MGP_129S1SvImJ_T0056179.1 MGP_129S1SvImJ_G0026159.1 mouse_genomes_project 2 93313848 93315580 - MGP_129S1SvImJ_P0056179 Mdk protein_coding protein_coding MGP_129S1SvImJ_T0010454.1 MGP_129S1SvImJ_G0008570.1 mouse_genomes_project 2 95780223 95780288 + Mir129b miRNA miRNA MGP_129S1SvImJ_T0011530.1 MGP_129S1SvImJ_G0009646.1 mouse_genomes_project 2 116750378 116750696 + Gm25103 misc_RNA misc_RNA MGP_129S1SvImJ_T0055925.1 MGP_129S1SvImJ_G0026108.1 mouse_genomes_project 2 90918279 90919224 - MGP_129S1SvImJ_P0055925 Olfr1252 protein_coding protein_coding MGP_129S1SvImJ_T0054117.1 MGP_129S1SvImJ_G0025605.1 mouse_genomes_project 2 30834644 30837734 - Lcn2 protein_coding processed_transcript MGP_129S1SvImJ_T0054118.1 MGP_129S1SvImJ_G0025605.1 mouse_genomes_project 2 30834644 30837809 - MGP_129S1SvImJ_P0054118 Lcn2 protein_coding protein_coding MGP_129S1SvImJ_T0054119.1 MGP_129S1SvImJ_G0025605.1 mouse_genomes_project 2 30834650 30836011 - Lcn2 protein_coding retained_intron MGP_129S1SvImJ_T0054120.1 MGP_129S1SvImJ_G0025605.1 mouse_genomes_project 2 30835194 30836119 - Lcn2 protein_coding retained_intron MGP_129S1SvImJ_T0054121.1 MGP_129S1SvImJ_G0025605.1 mouse_genomes_project 2 30835456 30838264 - MGP_129S1SvImJ_P0054121 Lcn2 protein_coding protein_coding MGP_129S1SvImJ_T0054122.1 MGP_129S1SvImJ_G0025605.1 mouse_genomes_project 2 30836567 30837771 - Lcn2 protein_coding retained_intron MGP_129S1SvImJ_T0056536.1 MGP_129S1SvImJ_G0026229.1 mouse_genomes_project 2 107545718 107558747 - MGP_129S1SvImJ_P0056536 Rcn1 protein_coding protein_coding MGP_129S1SvImJ_T0056537.1 MGP_129S1SvImJ_G0026229.1 mouse_genomes_project 2 107546356 107554776 - Rcn1 protein_coding retained_intron MGP_129S1SvImJ_T0013476.1 MGP_129S1SvImJ_G0011565.1 mouse_genomes_project 2 22410995 22412607 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059518.1 MGP_129S1SvImJ_G0026938.1 mouse_genomes_project 2 176800851 176961127 + MGP_129S1SvImJ_P0059518 Dok5 protein_coding protein_coding MGP_129S1SvImJ_T0052513.1 MGP_129S1SvImJ_G0025341.1 mouse_genomes_project 2 7724654 7794911 + MGP_129S1SvImJ_P0052513 Sfmbt2 protein_coding protein_coding MGP_129S1SvImJ_T0052514.1 MGP_129S1SvImJ_G0025341.1 mouse_genomes_project 2 7724655 7794911 + MGP_129S1SvImJ_P0052514 Sfmbt2 protein_coding protein_coding MGP_129S1SvImJ_T0052515.1 MGP_129S1SvImJ_G0025341.1 mouse_genomes_project 2 7724662 7759665 + Sfmbt2 protein_coding processed_transcript MGP_129S1SvImJ_T0052516.1 MGP_129S1SvImJ_G0025341.1 mouse_genomes_project 2 7727511 7794911 + MGP_129S1SvImJ_P0052516 Sfmbt2 protein_coding protein_coding MGP_129S1SvImJ_T0052517.1 MGP_129S1SvImJ_G0025341.1 mouse_genomes_project 2 7727511 7950595 + MGP_129S1SvImJ_P0052517 Sfmbt2 protein_coding protein_coding MGP_129S1SvImJ_T0052518.1 MGP_129S1SvImJ_G0025341.1 mouse_genomes_project 2 7727523 7748371 + Sfmbt2 protein_coding processed_transcript MGP_129S1SvImJ_T0052519.1 MGP_129S1SvImJ_G0025341.1 mouse_genomes_project 2 7727525 7950607 + MGP_129S1SvImJ_P0052519 Sfmbt2 protein_coding protein_coding MGP_129S1SvImJ_T0057973.1 MGP_129S1SvImJ_G0026571.1 mouse_genomes_project 2 144328693 146378984 + MGP_129S1SvImJ_P0057973 Macrod2 protein_coding protein_coding MGP_129S1SvImJ_T0057974.1 MGP_129S1SvImJ_G0026571.1 mouse_genomes_project 2 144328740 144649633 + MGP_129S1SvImJ_P0057974 Macrod2 protein_coding protein_coding MGP_129S1SvImJ_T0057975.1 MGP_129S1SvImJ_G0026571.1 mouse_genomes_project 2 144328740 146378984 + MGP_129S1SvImJ_P0057975 Macrod2 protein_coding protein_coding MGP_129S1SvImJ_T0057976.1 MGP_129S1SvImJ_G0026571.1 mouse_genomes_project 2 144328814 144360001 + MGP_129S1SvImJ_P0057976 Macrod2 protein_coding protein_coding MGP_129S1SvImJ_T0057977.1 MGP_129S1SvImJ_G0026571.1 mouse_genomes_project 2 144328817 144775560 + Macrod2 protein_coding retained_intron MGP_129S1SvImJ_T0057978.1 MGP_129S1SvImJ_G0026571.1 mouse_genomes_project 2 144328819 144360004 + MGP_129S1SvImJ_P0057978 Macrod2 protein_coding protein_coding MGP_129S1SvImJ_T0057979.1 MGP_129S1SvImJ_G0026571.1 mouse_genomes_project 2 144328819 146370414 + MGP_129S1SvImJ_P0057979 Macrod2 protein_coding protein_coding MGP_129S1SvImJ_T0057980.1 MGP_129S1SvImJ_G0026571.1 mouse_genomes_project 2 144328826 144449768 + Macrod2 protein_coding processed_transcript MGP_129S1SvImJ_T0057981.1 MGP_129S1SvImJ_G0026571.1 mouse_genomes_project 2 144328840 144588850 + Macrod2 protein_coding processed_transcript MGP_129S1SvImJ_T0057982.1 MGP_129S1SvImJ_G0026571.1 mouse_genomes_project 2 144328844 144357545 + Macrod2 protein_coding processed_transcript MGP_129S1SvImJ_T0057983.1 MGP_129S1SvImJ_G0026571.1 mouse_genomes_project 2 144334093 144357545 + MGP_129S1SvImJ_P0057983 Macrod2 protein_coding protein_coding MGP_129S1SvImJ_T0057987.1 MGP_129S1SvImJ_G0026571.1 mouse_genomes_project 2 144985657 145112461 + Macrod2 protein_coding processed_transcript MGP_129S1SvImJ_T0057988.1 MGP_129S1SvImJ_G0026571.1 mouse_genomes_project 2 145529856 146378984 + Macrod2 protein_coding processed_transcript MGP_129S1SvImJ_T0057989.1 MGP_129S1SvImJ_G0026571.1 mouse_genomes_project 2 146169042 146221155 + MGP_129S1SvImJ_P0057989 Macrod2 protein_coding protein_coding MGP_129S1SvImJ_T0058504.1 MGP_129S1SvImJ_G0026724.1 mouse_genomes_project 2 159550931 159551707 - Gm14214 protein_coding translated_processed_pseudogene MGP_129S1SvImJ_T0058505.1 MGP_129S1SvImJ_G0026724.1 mouse_genomes_project 2 159550931 159551609 - MGP_129S1SvImJ_P0058505 Gm14214 protein_coding protein_coding MGP_129S1SvImJ_T0055380.1 MGP_129S1SvImJ_G0025844.1 mouse_genomes_project 2 74966750 74973195 - MGP_129S1SvImJ_P0055380 Evx2 protein_coding protein_coding MGP_129S1SvImJ_T0055381.1 MGP_129S1SvImJ_G0025844.1 mouse_genomes_project 2 74969374 74973057 - MGP_129S1SvImJ_P0055381 Evx2 protein_coding protein_coding MGP_129S1SvImJ_T0100999.1 MGP_129S1SvImJ_G0039066.1 mouse_genomes_project 2 172763027 172763120 + Gm25878 snoRNA snoRNA MGP_129S1SvImJ_T0055703.1 MGP_129S1SvImJ_G0025921.1 mouse_genomes_project 2 85757102 85762647 + Tnks1bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0055704.1 MGP_129S1SvImJ_G0025921.1 mouse_genomes_project 2 85757135 85783557 + Tnks1bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0055705.1 MGP_129S1SvImJ_G0025921.1 mouse_genomes_project 2 85757175 85774596 + MGP_129S1SvImJ_P0055705 Tnks1bp1 protein_coding protein_coding MGP_129S1SvImJ_T0055706.1 MGP_129S1SvImJ_G0025921.1 mouse_genomes_project 2 85760972 85762565 + Tnks1bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0055707.1 MGP_129S1SvImJ_G0025921.1 mouse_genomes_project 2 85760972 85783561 + MGP_129S1SvImJ_P0055707 Tnks1bp1 protein_coding protein_coding MGP_129S1SvImJ_T0055708.1 MGP_129S1SvImJ_G0025921.1 mouse_genomes_project 2 85761120 85783551 + Tnks1bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0055709.1 MGP_129S1SvImJ_G0025921.1 mouse_genomes_project 2 85761405 85769070 + Tnks1bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0013619.1 MGP_129S1SvImJ_G0011708.1 mouse_genomes_project 2 77673445 77673877 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055710.1 MGP_129S1SvImJ_G0025922.1 mouse_genomes_project 2 85847148 85850847 + MGP_129S1SvImJ_P0055710 Aplnr protein_coding protein_coding MGP_129S1SvImJ_T0055711.1 MGP_129S1SvImJ_G0025922.1 mouse_genomes_project 2 85848315 85850845 + MGP_129S1SvImJ_P0055711 Aplnr protein_coding protein_coding MGP_129S1SvImJ_T0058457.1 MGP_129S1SvImJ_G0026710.1 mouse_genomes_project 2 158942174 158960445 + MGP_129S1SvImJ_P0058457 Bpifb5 protein_coding protein_coding MGP_129S1SvImJ_T0054576.1 MGP_129S1SvImJ_G0025705.1 mouse_genomes_project 2 37487944 37716130 - MGP_129S1SvImJ_P0054576 Nr6a1 protein_coding protein_coding MGP_129S1SvImJ_T0054577.1 MGP_129S1SvImJ_G0025705.1 mouse_genomes_project 2 37487948 37714709 - MGP_129S1SvImJ_P0054577 Nr6a1 protein_coding protein_coding MGP_129S1SvImJ_T0054578.1 MGP_129S1SvImJ_G0025705.1 mouse_genomes_project 2 37487948 37554417 - MGP_129S1SvImJ_P0054578 Nr6a1 protein_coding protein_coding MGP_129S1SvImJ_T0054579.1 MGP_129S1SvImJ_G0025705.1 mouse_genomes_project 2 37503088 37505956 - Nr6a1 protein_coding processed_transcript MGP_129S1SvImJ_T0054580.1 MGP_129S1SvImJ_G0025705.1 mouse_genomes_project 2 37504218 37508449 - Nr6a1 protein_coding processed_transcript MGP_129S1SvImJ_T0054581.1 MGP_129S1SvImJ_G0025705.1 mouse_genomes_project 2 37504626 37554422 - MGP_129S1SvImJ_P0054581 Nr6a1 protein_coding protein_coding MGP_129S1SvImJ_T0054582.1 MGP_129S1SvImJ_G0025705.1 mouse_genomes_project 2 37505915 37555013 - Nr6a1 protein_coding processed_transcript MGP_129S1SvImJ_T0054583.1 MGP_129S1SvImJ_G0025705.1 mouse_genomes_project 2 37506034 37714767 - MGP_129S1SvImJ_P0054583 Nr6a1 protein_coding protein_coding MGP_129S1SvImJ_T0054584.1 MGP_129S1SvImJ_G0025705.1 mouse_genomes_project 2 37507932 37554371 - Nr6a1 protein_coding processed_transcript MGP_129S1SvImJ_T0054585.1 MGP_129S1SvImJ_G0025705.1 mouse_genomes_project 2 37508448 37531989 - Nr6a1 protein_coding retained_intron MGP_129S1SvImJ_T0054586.1 MGP_129S1SvImJ_G0025705.1 mouse_genomes_project 2 37551822 37554371 - Nr6a1 protein_coding processed_transcript MGP_129S1SvImJ_T0099652.1 MGP_129S1SvImJ_G0037719.1 mouse_genomes_project 2 250657 250798 - Gm22005 snRNA snRNA MGP_129S1SvImJ_T0056569.1 MGP_129S1SvImJ_G0026233.1 mouse_genomes_project 2 108147429 108190605 - Dnajc24 protein_coding processed_transcript MGP_129S1SvImJ_T0056570.1 MGP_129S1SvImJ_G0026233.1 mouse_genomes_project 2 108147609 108190576 - MGP_129S1SvImJ_P0056570 Dnajc24 protein_coding protein_coding MGP_129S1SvImJ_T0056571.1 MGP_129S1SvImJ_G0026233.1 mouse_genomes_project 2 108147657 108190544 - Dnajc24 protein_coding processed_transcript MGP_129S1SvImJ_T0056572.1 MGP_129S1SvImJ_G0026233.1 mouse_genomes_project 2 108151079 108189419 - Dnajc24 protein_coding processed_transcript MGP_129S1SvImJ_T0013496.1 MGP_129S1SvImJ_G0011585.1 mouse_genomes_project 2 33576038 33576205 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059629.1 MGP_129S1SvImJ_G0026972.1 mouse_genomes_project 2 181144967 181168335 + MGP_129S1SvImJ_P0059629 Edn3 protein_coding protein_coding MGP_129S1SvImJ_T0059630.1 MGP_129S1SvImJ_G0026972.1 mouse_genomes_project 2 181145147 181166273 + MGP_129S1SvImJ_P0059630 Edn3 protein_coding protein_coding MGP_129S1SvImJ_T0059631.1 MGP_129S1SvImJ_G0026972.1 mouse_genomes_project 2 181145400 181166878 + Edn3 protein_coding retained_intron MGP_129S1SvImJ_T0059632.1 MGP_129S1SvImJ_G0026972.1 mouse_genomes_project 2 181154270 181166833 + Edn3 protein_coding processed_transcript MGP_129S1SvImJ_T0010362.1 MGP_129S1SvImJ_G0008478.1 mouse_genomes_project 2 7831618 7831708 + Mir297a-2 miRNA miRNA MGP_129S1SvImJ_T0059147.1 MGP_129S1SvImJ_G0026856.1 mouse_genomes_project 2 169946123 169958227 + MGP_129S1SvImJ_P0059147 Pigt protein_coding protein_coding MGP_129S1SvImJ_T0059148.1 MGP_129S1SvImJ_G0026856.1 mouse_genomes_project 2 169946138 169953257 + MGP_129S1SvImJ_P0059148 Pigt protein_coding protein_coding MGP_129S1SvImJ_T0059149.1 MGP_129S1SvImJ_G0026856.1 mouse_genomes_project 2 169946149 169953534 + Pigt protein_coding retained_intron MGP_129S1SvImJ_T0059150.1 MGP_129S1SvImJ_G0026856.1 mouse_genomes_project 2 169946164 169958227 + MGP_129S1SvImJ_P0059150 Pigt protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059151.1 MGP_129S1SvImJ_G0026856.1 mouse_genomes_project 2 169950011 169951755 + Pigt protein_coding retained_intron MGP_129S1SvImJ_T0056270.1 MGP_129S1SvImJ_G0026175.1 mouse_genomes_project 2 94917682 94963858 - MGP_129S1SvImJ_P0056270 Cd82 protein_coding protein_coding MGP_129S1SvImJ_T0056271.1 MGP_129S1SvImJ_G0026175.1 mouse_genomes_project 2 94917682 94963949 - MGP_129S1SvImJ_P0056271 Cd82 protein_coding protein_coding MGP_129S1SvImJ_T0056272.1 MGP_129S1SvImJ_G0026175.1 mouse_genomes_project 2 94917687 94964393 - MGP_129S1SvImJ_P0056272 Cd82 protein_coding protein_coding MGP_129S1SvImJ_T0056273.1 MGP_129S1SvImJ_G0026175.1 mouse_genomes_project 2 94917725 94918859 - Cd82 protein_coding processed_transcript MGP_129S1SvImJ_T0056274.1 MGP_129S1SvImJ_G0026175.1 mouse_genomes_project 2 94918401 94954128 - MGP_129S1SvImJ_P0056274 Cd82 protein_coding protein_coding MGP_129S1SvImJ_T0056275.1 MGP_129S1SvImJ_G0026175.1 mouse_genomes_project 2 94919228 94963833 - MGP_129S1SvImJ_P0056275 Cd82 protein_coding protein_coding MGP_129S1SvImJ_T0056276.1 MGP_129S1SvImJ_G0026175.1 mouse_genomes_project 2 94920398 94954132 - MGP_129S1SvImJ_P0056276 Cd82 protein_coding protein_coding MGP_129S1SvImJ_T0056277.1 MGP_129S1SvImJ_G0026175.1 mouse_genomes_project 2 94920398 94963359 - MGP_129S1SvImJ_P0056277 Cd82 protein_coding protein_coding MGP_129S1SvImJ_T0056278.1 MGP_129S1SvImJ_G0026175.1 mouse_genomes_project 2 94929916 94964587 - MGP_129S1SvImJ_P0056278 Cd82 protein_coding protein_coding MGP_129S1SvImJ_T0056279.1 MGP_129S1SvImJ_G0026175.1 mouse_genomes_project 2 94933267 94963890 - Cd82 protein_coding processed_transcript MGP_129S1SvImJ_T0056280.1 MGP_129S1SvImJ_G0026175.1 mouse_genomes_project 2 94937157 94964359 - MGP_129S1SvImJ_P0056280 Cd82 protein_coding protein_coding MGP_129S1SvImJ_T0100964.1 MGP_129S1SvImJ_G0039031.1 mouse_genomes_project 2 123880781 123880995 + Gm22865 snoRNA snoRNA MGP_129S1SvImJ_T0004189.1 MGP_129S1SvImJ_G0003701.1 mouse_genomes_project 2 173422312 173429984 + Gm14320 antisense antisense MGP_129S1SvImJ_T0098560.1 MGP_129S1SvImJ_G0036645.1 mouse_genomes_project 2 75266671 75266771 - n-R5s198 rRNA rRNA MGP_129S1SvImJ_T0007362.1 MGP_129S1SvImJ_G0006038.1 mouse_genomes_project 2 154138688 154187757 - Gm14133 lincRNA lincRNA MGP_129S1SvImJ_T0004017.1 MGP_129S1SvImJ_G0003581.1 mouse_genomes_project 2 70551467 70557190 - Erich2os antisense antisense MGP_129S1SvImJ_T0102434.1 MGP_129S1SvImJ_G0040268.1 mouse_genomes_project 2 91505715 91506640 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0059904.1 MGP_129S1SvImJ_G0027028.1 mouse_genomes_project 2 188179292 188193067 - MGP_129S1SvImJ_P0059904 Uckl1 protein_coding protein_coding MGP_129S1SvImJ_T0059905.1 MGP_129S1SvImJ_G0027028.1 mouse_genomes_project 2 188179296 188180535 - MGP_129S1SvImJ_P0059905 Uckl1 protein_coding protein_coding MGP_129S1SvImJ_T0059906.1 MGP_129S1SvImJ_G0027028.1 mouse_genomes_project 2 188179299 188179945 - Uckl1 protein_coding retained_intron MGP_129S1SvImJ_T0059907.1 MGP_129S1SvImJ_G0027028.1 mouse_genomes_project 2 188179310 188193071 - MGP_129S1SvImJ_P0059907 Uckl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059908.1 MGP_129S1SvImJ_G0027028.1 mouse_genomes_project 2 188179312 188180029 - Uckl1 protein_coding retained_intron MGP_129S1SvImJ_T0059909.1 MGP_129S1SvImJ_G0027028.1 mouse_genomes_project 2 188179378 188182688 - Uckl1 protein_coding retained_intron MGP_129S1SvImJ_T0059910.1 MGP_129S1SvImJ_G0027028.1 mouse_genomes_project 2 188179761 188183275 - MGP_129S1SvImJ_P0059910 Uckl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059911.1 MGP_129S1SvImJ_G0027028.1 mouse_genomes_project 2 188179800 188183275 - Uckl1 protein_coding retained_intron MGP_129S1SvImJ_T0059912.1 MGP_129S1SvImJ_G0027028.1 mouse_genomes_project 2 188179911 188181523 - Uckl1 protein_coding retained_intron MGP_129S1SvImJ_T0059913.1 MGP_129S1SvImJ_G0027028.1 mouse_genomes_project 2 188179997 188183284 - Uckl1 protein_coding retained_intron MGP_129S1SvImJ_T0059914.1 MGP_129S1SvImJ_G0027028.1 mouse_genomes_project 2 188180153 188184624 - Uckl1 protein_coding processed_transcript MGP_129S1SvImJ_T0059915.1 MGP_129S1SvImJ_G0027028.1 mouse_genomes_project 2 188180508 188182306 - Uckl1 protein_coding processed_transcript MGP_129S1SvImJ_T0059916.1 MGP_129S1SvImJ_G0027028.1 mouse_genomes_project 2 188182472 188184648 - Uckl1 protein_coding retained_intron MGP_129S1SvImJ_T0059917.1 MGP_129S1SvImJ_G0027028.1 mouse_genomes_project 2 188183400 188196259 - MGP_129S1SvImJ_P0059917 Uckl1 protein_coding protein_coding MGP_129S1SvImJ_T0059918.1 MGP_129S1SvImJ_G0027028.1 mouse_genomes_project 2 188183445 188184982 - Uckl1 protein_coding retained_intron MGP_129S1SvImJ_T0059919.1 MGP_129S1SvImJ_G0027028.1 mouse_genomes_project 2 188183456 188189100 - MGP_129S1SvImJ_P0059919 Uckl1 protein_coding protein_coding MGP_129S1SvImJ_T0059920.1 MGP_129S1SvImJ_G0027028.1 mouse_genomes_project 2 188184432 188193077 - Uckl1 protein_coding retained_intron MGP_129S1SvImJ_T0010434.1 MGP_129S1SvImJ_G0008550.1 mouse_genomes_project 2 67551311 67551371 + Mir7224 miRNA miRNA MGP_129S1SvImJ_T0059096.1 MGP_129S1SvImJ_G0026835.1 mouse_genomes_project 2 169434589 169450061 - MGP_129S1SvImJ_P0059096 Tomm34 protein_coding protein_coding MGP_129S1SvImJ_T0059097.1 MGP_129S1SvImJ_G0026835.1 mouse_genomes_project 2 169434589 169450128 - MGP_129S1SvImJ_P0059097 Tomm34 protein_coding protein_coding MGP_129S1SvImJ_T0099699.1 MGP_129S1SvImJ_G0037766.1 mouse_genomes_project 2 136336817 136336920 + Gm22245 snRNA snRNA MGP_129S1SvImJ_T0013638.1 MGP_129S1SvImJ_G0011727.1 mouse_genomes_project 2 83168664 83169193 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010464.1 MGP_129S1SvImJ_G0008580.1 mouse_genomes_project 2 119819028 119819128 + Mir674 miRNA miRNA MGP_129S1SvImJ_T0056662.1 MGP_129S1SvImJ_G0026277.1 mouse_genomes_project 2 114440934 114441873 - MGP_129S1SvImJ_P0056662 protein_coding protein_coding MGP_129S1SvImJ_T0055203.1 MGP_129S1SvImJ_G0025815.1 mouse_genomes_project 2 70717216 70772528 + MGP_129S1SvImJ_P0055203 Gorasp2 protein_coding protein_coding MGP_129S1SvImJ_T0055204.1 MGP_129S1SvImJ_G0025815.1 mouse_genomes_project 2 70717216 70747388 + MGP_129S1SvImJ_P0055204 Gorasp2 protein_coding protein_coding MGP_129S1SvImJ_T0055205.1 MGP_129S1SvImJ_G0025815.1 mouse_genomes_project 2 70717216 70747370 + MGP_129S1SvImJ_P0055205 Gorasp2 protein_coding protein_coding MGP_129S1SvImJ_T0055206.1 MGP_129S1SvImJ_G0025815.1 mouse_genomes_project 2 70717230 70745005 + MGP_129S1SvImJ_P0055206 Gorasp2 protein_coding protein_coding MGP_129S1SvImJ_T0055207.1 MGP_129S1SvImJ_G0025815.1 mouse_genomes_project 2 70717840 70733595 + Gorasp2 protein_coding processed_transcript MGP_129S1SvImJ_T0055208.1 MGP_129S1SvImJ_G0025815.1 mouse_genomes_project 2 70743457 70747366 + Gorasp2 protein_coding processed_transcript MGP_129S1SvImJ_T0013425.1 MGP_129S1SvImJ_G0011514.1 mouse_genomes_project 2 2398006 2398231 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007146.1 MGP_129S1SvImJ_G0005865.1 mouse_genomes_project 2 8410315 8435888 + Gm13264 lincRNA lincRNA MGP_129S1SvImJ_T0017943.1 MGP_129S1SvImJ_G0015486.1 mouse_genomes_project 2 165100836 165135754 + 4933416E03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0101671.1 MGP_129S1SvImJ_G0039692.1 mouse_genomes_project 2 52101509 52101894 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0011522.1 MGP_129S1SvImJ_G0009638.1 mouse_genomes_project 2 68402336 68402578 + Gm26321 misc_RNA misc_RNA MGP_129S1SvImJ_T0013510.1 MGP_129S1SvImJ_G0011599.1 mouse_genomes_project 2 37545959 37546565 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098351.1 MGP_129S1SvImJ_G0036436.1 mouse_genomes_project 2 27894611 27894942 - pseudogene pseudogene MGP_129S1SvImJ_T0013799.1 MGP_129S1SvImJ_G0011888.1 mouse_genomes_project 2 145830444 145830908 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099658.1 MGP_129S1SvImJ_G0037725.1 mouse_genomes_project 2 18024897 18025004 + Gm23970 snRNA snRNA MGP_129S1SvImJ_T0013705.1 MGP_129S1SvImJ_G0011794.1 mouse_genomes_project 2 105806884 105807616 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013747.1 MGP_129S1SvImJ_G0011836.1 mouse_genomes_project 2 121922094 121922844 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055694.1 MGP_129S1SvImJ_G0025920.1 mouse_genomes_project 2 85746314 85756190 + MGP_129S1SvImJ_P0055694 Ssrp1 protein_coding protein_coding MGP_129S1SvImJ_T0055695.1 MGP_129S1SvImJ_G0025920.1 mouse_genomes_project 2 85746531 85756187 + MGP_129S1SvImJ_P0055695 Ssrp1 protein_coding protein_coding MGP_129S1SvImJ_T0055696.1 MGP_129S1SvImJ_G0025920.1 mouse_genomes_project 2 85746533 85748352 + Ssrp1 protein_coding processed_transcript MGP_129S1SvImJ_T0055697.1 MGP_129S1SvImJ_G0025920.1 mouse_genomes_project 2 85746535 85754853 + MGP_129S1SvImJ_P0055697 Ssrp1 protein_coding protein_coding MGP_129S1SvImJ_T0055698.1 MGP_129S1SvImJ_G0025920.1 mouse_genomes_project 2 85746613 85749536 + Ssrp1 protein_coding processed_transcript MGP_129S1SvImJ_T0055699.1 MGP_129S1SvImJ_G0025920.1 mouse_genomes_project 2 85749192 85750103 + Ssrp1 protein_coding processed_transcript MGP_129S1SvImJ_T0055700.1 MGP_129S1SvImJ_G0025920.1 mouse_genomes_project 2 85750254 85751390 + Ssrp1 protein_coding processed_transcript MGP_129S1SvImJ_T0055701.1 MGP_129S1SvImJ_G0025920.1 mouse_genomes_project 2 85754331 85755799 + Ssrp1 protein_coding processed_transcript MGP_129S1SvImJ_T0055702.1 MGP_129S1SvImJ_G0025920.1 mouse_genomes_project 2 85754435 85755366 + Ssrp1 protein_coding processed_transcript MGP_129S1SvImJ_T0004087.1 MGP_129S1SvImJ_G0003624.1 mouse_genomes_project 2 122879808 122882416 - Gm13999 antisense antisense MGP_129S1SvImJ_T0007231.1 MGP_129S1SvImJ_G0005934.1 mouse_genomes_project 2 72959639 73033090 - 6430710C18Rik lincRNA lincRNA MGP_129S1SvImJ_T0007232.1 MGP_129S1SvImJ_G0005934.1 mouse_genomes_project 2 72960298 72964660 - 6430710C18Rik lincRNA lincRNA MGP_129S1SvImJ_T0007233.1 MGP_129S1SvImJ_G0005934.1 mouse_genomes_project 2 73002894 73033135 - 6430710C18Rik lincRNA lincRNA MGP_129S1SvImJ_T0007234.1 MGP_129S1SvImJ_G0005934.1 mouse_genomes_project 2 73003211 73018371 - 6430710C18Rik lincRNA lincRNA MGP_129S1SvImJ_T0052316.1 MGP_129S1SvImJ_G0025307.1 mouse_genomes_project 2 380028 393587 - MGP_129S1SvImJ_P0052316 Meig1 protein_coding protein_coding MGP_129S1SvImJ_T0052317.1 MGP_129S1SvImJ_G0025307.1 mouse_genomes_project 2 380028 389976 - MGP_129S1SvImJ_P0052317 Meig1 protein_coding protein_coding MGP_129S1SvImJ_T0052318.1 MGP_129S1SvImJ_G0025307.1 mouse_genomes_project 2 380031 389998 - MGP_129S1SvImJ_P0052318 Meig1 protein_coding protein_coding MGP_129S1SvImJ_T0052319.1 MGP_129S1SvImJ_G0025307.1 mouse_genomes_project 2 380032 390086 - MGP_129S1SvImJ_P0052319 Meig1 protein_coding protein_coding MGP_129S1SvImJ_T0052320.1 MGP_129S1SvImJ_G0025307.1 mouse_genomes_project 2 380095 389540 - MGP_129S1SvImJ_P0052320 Meig1 protein_coding protein_coding MGP_129S1SvImJ_T0052321.1 MGP_129S1SvImJ_G0025307.1 mouse_genomes_project 2 380252 393533 - MGP_129S1SvImJ_P0052321 Meig1 protein_coding protein_coding MGP_129S1SvImJ_T0059298.1 MGP_129S1SvImJ_G0026894.1 mouse_genomes_project 2 170968380 171040775 - MGP_129S1SvImJ_P0059298 Slc13a3 protein_coding protein_coding MGP_129S1SvImJ_T0059299.1 MGP_129S1SvImJ_G0026894.1 mouse_genomes_project 2 170968647 171040775 - MGP_129S1SvImJ_P0059299 Slc13a3 protein_coding protein_coding MGP_129S1SvImJ_T0059300.1 MGP_129S1SvImJ_G0026894.1 mouse_genomes_project 2 170970057 170972417 - Slc13a3 protein_coding retained_intron MGP_129S1SvImJ_T0059301.1 MGP_129S1SvImJ_G0026894.1 mouse_genomes_project 2 170975233 170985431 - Slc13a3 protein_coding retained_intron MGP_129S1SvImJ_T0059302.1 MGP_129S1SvImJ_G0026894.1 mouse_genomes_project 2 171010177 171040744 - Slc13a3 protein_coding retained_intron MGP_129S1SvImJ_T0058995.1 MGP_129S1SvImJ_G0026809.1 mouse_genomes_project 2 166108162 166114044 - MGP_129S1SvImJ_P0058995 Emilin3 protein_coding protein_coding MGP_129S1SvImJ_T0058996.1 MGP_129S1SvImJ_G0026809.1 mouse_genomes_project 2 166108163 166114055 - MGP_129S1SvImJ_P0058996 Emilin3 protein_coding protein_coding MGP_129S1SvImJ_T0007238.1 MGP_129S1SvImJ_G0005938.1 mouse_genomes_project 2 74441548 74442098 + Gm28640 lincRNA lincRNA MGP_129S1SvImJ_T0011529.1 MGP_129S1SvImJ_G0009645.1 mouse_genomes_project 2 107275160 107276270 - Gm27308 misc_RNA misc_RNA MGP_129S1SvImJ_T0010398.1 MGP_129S1SvImJ_G0008514.1 mouse_genomes_project 2 22909640 22909703 + Mir7664 miRNA miRNA MGP_129S1SvImJ_T0007223.1 MGP_129S1SvImJ_G0005926.1 mouse_genomes_project 2 67020406 67064240 - Gm13598 lincRNA lincRNA MGP_129S1SvImJ_T0055132.1 MGP_129S1SvImJ_G0025800.1 mouse_genomes_project 2 69629621 69649799 + MGP_129S1SvImJ_P0055132 Bbs5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055133.1 MGP_129S1SvImJ_G0025800.1 mouse_genomes_project 2 69629658 69649973 + MGP_129S1SvImJ_P0055133 Bbs5 protein_coding protein_coding MGP_129S1SvImJ_T0055134.1 MGP_129S1SvImJ_G0025800.1 mouse_genomes_project 2 69629680 69632007 + Bbs5 protein_coding retained_intron MGP_129S1SvImJ_T0055135.1 MGP_129S1SvImJ_G0025800.1 mouse_genomes_project 2 69629703 69636664 + Bbs5 protein_coding retained_intron MGP_129S1SvImJ_T0055136.1 MGP_129S1SvImJ_G0025800.1 mouse_genomes_project 2 69629713 69635508 + Bbs5 protein_coding retained_intron MGP_129S1SvImJ_T0055137.1 MGP_129S1SvImJ_G0025800.1 mouse_genomes_project 2 69637839 69647509 + Bbs5 protein_coding retained_intron MGP_129S1SvImJ_T0013803.1 MGP_129S1SvImJ_G0011892.1 mouse_genomes_project 2 147368452 147368602 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054574.1 MGP_129S1SvImJ_G0025704.1 mouse_genomes_project 2 37458616 37476360 - MGP_129S1SvImJ_P0054574 Nr5a1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0054575.1 MGP_129S1SvImJ_G0025704.1 mouse_genomes_project 2 37465921 37475774 - Nr5a1 protein_coding retained_intron MGP_129S1SvImJ_T0056689.1 MGP_129S1SvImJ_G0026292.1 mouse_genomes_project 2 114930793 114932392 - MGP_129S1SvImJ_P0056689 Chrm5 protein_coding protein_coding MGP_129S1SvImJ_T0017769.1 MGP_129S1SvImJ_G0015396.1 mouse_genomes_project 2 15723181 15725602 - 1810059C17Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0055808.1 MGP_129S1SvImJ_G0026011.1 mouse_genomes_project 2 88559266 88561930 + Pramel6 protein_coding processed_transcript MGP_129S1SvImJ_T0055809.1 MGP_129S1SvImJ_G0026011.1 mouse_genomes_project 2 88559266 88561921 + Pramel6 protein_coding processed_transcript MGP_129S1SvImJ_T0055810.1 MGP_129S1SvImJ_G0026011.1 mouse_genomes_project 2 88559284 88562101 + Pramel6 protein_coding processed_transcript MGP_129S1SvImJ_T0055811.1 MGP_129S1SvImJ_G0026011.1 mouse_genomes_project 2 88560126 88562014 + Pramel6 protein_coding processed_transcript MGP_129S1SvImJ_T0055812.1 MGP_129S1SvImJ_G0026011.1 mouse_genomes_project 2 88560126 88563574 + MGP_129S1SvImJ_P0055812 Pramel6 protein_coding protein_coding MGP_129S1SvImJ_T0055813.1 MGP_129S1SvImJ_G0026011.1 mouse_genomes_project 2 88561159 88563567 + MGP_129S1SvImJ_P0055813 Pramel6 protein_coding protein_coding MGP_129S1SvImJ_T0013745.1 MGP_129S1SvImJ_G0011834.1 mouse_genomes_project 2 121168247 121169106 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058376.1 MGP_129S1SvImJ_G0026687.1 mouse_genomes_project 2 157715276 157763856 + MGP_129S1SvImJ_P0058376 Hck protein_coding protein_coding MGP_129S1SvImJ_T0058377.1 MGP_129S1SvImJ_G0026687.1 mouse_genomes_project 2 157715276 157763858 + MGP_129S1SvImJ_P0058377 Hck protein_coding protein_coding MGP_129S1SvImJ_T0059132.1 MGP_129S1SvImJ_G0026852.1 mouse_genomes_project 2 169900034 169903765 + Sys1 protein_coding processed_transcript MGP_129S1SvImJ_T0059133.1 MGP_129S1SvImJ_G0026852.1 mouse_genomes_project 2 169900046 169908293 + MGP_129S1SvImJ_P0059133 Sys1 protein_coding protein_coding MGP_129S1SvImJ_T0059134.1 MGP_129S1SvImJ_G0026852.1 mouse_genomes_project 2 169900158 169904137 + Sys1 protein_coding processed_transcript MGP_129S1SvImJ_T0059136.1 MGP_129S1SvImJ_G0026852.1 mouse_genomes_project 2 169903799 169908289 + MGP_129S1SvImJ_P0059136 Sys1 protein_coding protein_coding MGP_129S1SvImJ_T0059137.1 MGP_129S1SvImJ_G0026852.1 mouse_genomes_project 2 169903828 169917244 + MGP_129S1SvImJ_P0059137 Sys1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059138.1 MGP_129S1SvImJ_G0026852.1 mouse_genomes_project 2 169903881 169923696 + MGP_129S1SvImJ_P0059138 Sys1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059139.1 MGP_129S1SvImJ_G0026852.1 mouse_genomes_project 2 169904137 169917244 + MGP_129S1SvImJ_P0059139 Sys1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057768.1 MGP_129S1SvImJ_G0026524.1 mouse_genomes_project 2 134683774 134687495 - MGP_129S1SvImJ_P0057768 Spef1 protein_coding protein_coding MGP_129S1SvImJ_T0007422.1 MGP_129S1SvImJ_G0006090.1 mouse_genomes_project 2 175382878 175388954 - 4930529I22Rik lincRNA lincRNA MGP_129S1SvImJ_T0013642.1 MGP_129S1SvImJ_G0011731.1 mouse_genomes_project 2 84071954 84072656 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056703.1 MGP_129S1SvImJ_G0026296.1 mouse_genomes_project 2 115802465 116192088 + MGP_129S1SvImJ_P0056703 Fmn1 protein_coding protein_coding MGP_129S1SvImJ_T0056704.1 MGP_129S1SvImJ_G0026296.1 mouse_genomes_project 2 115802500 115971048 + Fmn1 protein_coding processed_transcript MGP_129S1SvImJ_T0056705.1 MGP_129S1SvImJ_G0026296.1 mouse_genomes_project 2 115802511 116185176 + MGP_129S1SvImJ_P0056705 Fmn1 protein_coding protein_coding MGP_129S1SvImJ_T0056706.1 MGP_129S1SvImJ_G0026296.1 mouse_genomes_project 2 115837230 116184927 + MGP_129S1SvImJ_P0056706 Fmn1 protein_coding protein_coding MGP_129S1SvImJ_T0056707.1 MGP_129S1SvImJ_G0026296.1 mouse_genomes_project 2 115913967 116185176 + MGP_129S1SvImJ_P0056707 Fmn1 protein_coding protein_coding MGP_129S1SvImJ_T0056708.1 MGP_129S1SvImJ_G0026296.1 mouse_genomes_project 2 116160493 116168547 + Fmn1 protein_coding processed_transcript MGP_129S1SvImJ_T0056709.1 MGP_129S1SvImJ_G0026296.1 mouse_genomes_project 2 116160508 116185173 + Fmn1 protein_coding processed_transcript MGP_129S1SvImJ_T0056710.1 MGP_129S1SvImJ_G0026296.1 mouse_genomes_project 2 116160508 116185055 + Fmn1 protein_coding processed_transcript MGP_129S1SvImJ_T0056711.1 MGP_129S1SvImJ_G0026296.1 mouse_genomes_project 2 116183991 116185051 + Fmn1 protein_coding processed_transcript MGP_129S1SvImJ_T0100978.1 MGP_129S1SvImJ_G0039045.1 mouse_genomes_project 2 152965142 152965254 + Gm25866 snoRNA snoRNA MGP_129S1SvImJ_T0056676.1 MGP_129S1SvImJ_G0026288.1 mouse_genomes_project 2 114712071 114858782 + MGP_129S1SvImJ_P0056676 Gm21985 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0007346.1 MGP_129S1SvImJ_G0006025.1 mouse_genomes_project 2 140994685 140995435 + Gm28214 lincRNA lincRNA MGP_129S1SvImJ_T0056712.1 MGP_129S1SvImJ_G0026297.1 mouse_genomes_project 2 116215445 116232508 - MGP_129S1SvImJ_P0056712 Grem1 protein_coding protein_coding MGP_129S1SvImJ_T0001105.1 MGP_129S1SvImJ_G0001034.1 mouse_genomes_project 2 68880963 68882567 + TEC TEC MGP_129S1SvImJ_T0013517.1 MGP_129S1SvImJ_G0011606.1 mouse_genomes_project 2 38362918 38363510 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057942.1 MGP_129S1SvImJ_G0026561.1 mouse_genomes_project 2 140681032 140858852 + MGP_129S1SvImJ_P0057942 Slx4ip protein_coding protein_coding MGP_129S1SvImJ_T0057943.1 MGP_129S1SvImJ_G0026561.1 mouse_genomes_project 2 140681315 140799676 + MGP_129S1SvImJ_P0057943 Slx4ip protein_coding protein_coding MGP_129S1SvImJ_T0057944.1 MGP_129S1SvImJ_G0026561.1 mouse_genomes_project 2 140681422 140861156 + Slx4ip protein_coding processed_transcript MGP_129S1SvImJ_T0057945.1 MGP_129S1SvImJ_G0026561.1 mouse_genomes_project 2 140681980 140857477 + Slx4ip protein_coding processed_transcript MGP_129S1SvImJ_T0057946.1 MGP_129S1SvImJ_G0026561.1 mouse_genomes_project 2 140681980 140861156 + MGP_129S1SvImJ_P0057946 Slx4ip protein_coding protein_coding MGP_129S1SvImJ_T0057947.1 MGP_129S1SvImJ_G0026561.1 mouse_genomes_project 2 140695124 140858981 + MGP_129S1SvImJ_P0057947 Slx4ip protein_coding protein_coding MGP_129S1SvImJ_T0059171.1 MGP_129S1SvImJ_G0026868.1 mouse_genomes_project 2 170205101 170207931 + MGP_129S1SvImJ_P0059171 Spint5 protein_coding protein_coding MGP_129S1SvImJ_T0059172.1 MGP_129S1SvImJ_G0026868.1 mouse_genomes_project 2 170205101 170207931 + MGP_129S1SvImJ_P0059172 Spint5 protein_coding protein_coding MGP_129S1SvImJ_T0003941.1 MGP_129S1SvImJ_G0003522.1 mouse_genomes_project 2 23625735 23634406 - antisense antisense MGP_129S1SvImJ_T0003942.1 MGP_129S1SvImJ_G0003522.1 mouse_genomes_project 2 23626392 23628151 - antisense antisense MGP_129S1SvImJ_T0057261.1 MGP_129S1SvImJ_G0026401.1 mouse_genomes_project 2 124923277 124986495 + MGP_129S1SvImJ_P0057261 Ctdspl2 protein_coding protein_coding MGP_129S1SvImJ_T0057262.1 MGP_129S1SvImJ_G0026401.1 mouse_genomes_project 2 124923691 124985242 + MGP_129S1SvImJ_P0057262 Ctdspl2 protein_coding protein_coding MGP_129S1SvImJ_T0057263.1 MGP_129S1SvImJ_G0026401.1 mouse_genomes_project 2 124923740 124966249 + Ctdspl2 protein_coding retained_intron MGP_129S1SvImJ_T0057264.1 MGP_129S1SvImJ_G0026401.1 mouse_genomes_project 2 124923760 124985466 + Ctdspl2 protein_coding processed_transcript MGP_129S1SvImJ_T0057265.1 MGP_129S1SvImJ_G0026401.1 mouse_genomes_project 2 124923766 124965846 + Ctdspl2 protein_coding processed_transcript MGP_129S1SvImJ_T0057266.1 MGP_129S1SvImJ_G0026401.1 mouse_genomes_project 2 124923766 124960940 + Ctdspl2 protein_coding retained_intron MGP_129S1SvImJ_T0057267.1 MGP_129S1SvImJ_G0026401.1 mouse_genomes_project 2 124923939 124983581 + MGP_129S1SvImJ_P0057267 Ctdspl2 protein_coding protein_coding MGP_129S1SvImJ_T0057268.1 MGP_129S1SvImJ_G0026401.1 mouse_genomes_project 2 124937399 124986442 + MGP_129S1SvImJ_P0057268 Ctdspl2 protein_coding protein_coding MGP_129S1SvImJ_T0057269.1 MGP_129S1SvImJ_G0026401.1 mouse_genomes_project 2 124948986 124976837 + Ctdspl2 protein_coding retained_intron MGP_129S1SvImJ_T0013458.1 MGP_129S1SvImJ_G0011547.1 mouse_genomes_project 2 16363010 16363272 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055731.1 MGP_129S1SvImJ_G0025940.1 mouse_genomes_project 2 86602297 86603233 + MGP_129S1SvImJ_P0055731 Olfr1018 protein_coding protein_coding MGP_129S1SvImJ_T0013670.1 MGP_129S1SvImJ_G0011759.1 mouse_genomes_project 2 90370674 90371481 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007320.1 MGP_129S1SvImJ_G0006004.1 mouse_genomes_project 2 120949271 120955225 - A930104D05Rik lincRNA lincRNA MGP_129S1SvImJ_T0007321.1 MGP_129S1SvImJ_G0006004.1 mouse_genomes_project 2 120952061 120955057 - A930104D05Rik lincRNA lincRNA MGP_129S1SvImJ_T0099655.1 MGP_129S1SvImJ_G0037722.1 mouse_genomes_project 2 4564036 4564133 + Gm24340 snRNA snRNA MGP_129S1SvImJ_T0055773.1 MGP_129S1SvImJ_G0025980.1 mouse_genomes_project 2 87698421 87699357 - MGP_129S1SvImJ_P0055773 Olfr1089 protein_coding protein_coding MGP_129S1SvImJ_T0055392.1 MGP_129S1SvImJ_G0025852.1 mouse_genomes_project 2 75025754 75042667 + Hoxd4 protein_coding processed_transcript MGP_129S1SvImJ_T0055393.1 MGP_129S1SvImJ_G0025852.1 mouse_genomes_project 2 75035777 75042959 + MGP_129S1SvImJ_P0055393 Hoxd4 protein_coding protein_coding MGP_129S1SvImJ_T0055395.1 MGP_129S1SvImJ_G0025852.1 mouse_genomes_project 2 75040872 75042922 + MGP_129S1SvImJ_P0055395 Hoxd4 protein_coding protein_coding MGP_129S1SvImJ_T0013519.1 MGP_129S1SvImJ_G0011608.1 mouse_genomes_project 2 38471583 38471703 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098853.1 MGP_129S1SvImJ_G0036932.1 mouse_genomes_project 2 1203944 1206498 + Gm37107 sense_intronic sense_intronic MGP_129S1SvImJ_T0056883.1 MGP_129S1SvImJ_G0026337.1 mouse_genomes_project 2 121955373 121967033 - MGP_129S1SvImJ_P0056883 Ppp1r14d protein_coding protein_coding MGP_129S1SvImJ_T0056884.1 MGP_129S1SvImJ_G0026337.1 mouse_genomes_project 2 121955394 121966992 - MGP_129S1SvImJ_P0056884 Ppp1r14d protein_coding protein_coding MGP_129S1SvImJ_T0059621.1 MGP_129S1SvImJ_G0026969.1 mouse_genomes_project 2 180821312 180824348 - MGP_129S1SvImJ_P0059621 Atp5e protein_coding protein_coding MGP_129S1SvImJ_T0059622.1 MGP_129S1SvImJ_G0026969.1 mouse_genomes_project 2 180821315 180824292 - Atp5e protein_coding retained_intron MGP_129S1SvImJ_T0059623.1 MGP_129S1SvImJ_G0026969.1 mouse_genomes_project 2 180822761 180824332 - Atp5e protein_coding retained_intron MGP_129S1SvImJ_T0057576.1 MGP_129S1SvImJ_G0026482.1 mouse_genomes_project 2 132436524 132469069 + MGP_129S1SvImJ_P0057576 Ttl protein_coding protein_coding MGP_129S1SvImJ_T0057577.1 MGP_129S1SvImJ_G0026482.1 mouse_genomes_project 2 132436567 132438688 + Ttl protein_coding processed_transcript MGP_129S1SvImJ_T0057578.1 MGP_129S1SvImJ_G0026482.1 mouse_genomes_project 2 132447321 132460863 + MGP_129S1SvImJ_P0057578 Ttl protein_coding protein_coding MGP_129S1SvImJ_T0013554.1 MGP_129S1SvImJ_G0011643.1 mouse_genomes_project 2 53784553 53785104 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053664.1 MGP_129S1SvImJ_G0025544.1 mouse_genomes_project 2 27974430 27989125 + MGP_129S1SvImJ_P0053664 Slc27a4 protein_coding protein_coding MGP_129S1SvImJ_T0053665.1 MGP_129S1SvImJ_G0025544.1 mouse_genomes_project 2 27978793 27982498 + Slc27a4 protein_coding processed_transcript MGP_129S1SvImJ_T0013621.1 MGP_129S1SvImJ_G0011710.1 mouse_genomes_project 2 78429417 78430211 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058543.1 MGP_129S1SvImJ_G0026732.1 mouse_genomes_project 2 160087794 160110808 - Pigu protein_coding processed_transcript MGP_129S1SvImJ_T0058544.1 MGP_129S1SvImJ_G0026732.1 mouse_genomes_project 2 160087794 160171266 - MGP_129S1SvImJ_P0058544 Pigu protein_coding protein_coding MGP_129S1SvImJ_T0058545.1 MGP_129S1SvImJ_G0026732.1 mouse_genomes_project 2 160087795 160171260 - MGP_129S1SvImJ_P0058545 Pigu protein_coding protein_coding MGP_129S1SvImJ_T0058546.1 MGP_129S1SvImJ_G0026732.1 mouse_genomes_project 2 160110771 160114145 - Pigu protein_coding processed_transcript MGP_129S1SvImJ_T0058547.1 MGP_129S1SvImJ_G0026732.1 mouse_genomes_project 2 160145187 160171255 - Pigu protein_coding retained_intron MGP_129S1SvImJ_T0017833.1 MGP_129S1SvImJ_G0015440.1 mouse_genomes_project 2 90297441 90302001 - Gm13764 processed_transcript processed_transcript MGP_129S1SvImJ_T0011509.1 MGP_129S1SvImJ_G0009625.1 mouse_genomes_project 2 18323722 18323811 + Gm27446 misc_RNA misc_RNA MGP_129S1SvImJ_T0055758.1 MGP_129S1SvImJ_G0025966.1 mouse_genomes_project 2 87169162 87170104 - MGP_129S1SvImJ_P0055758 Olfr1053 protein_coding protein_coding MGP_129S1SvImJ_T0098567.1 MGP_129S1SvImJ_G0036652.1 mouse_genomes_project 2 121034276 121034370 + Gm22651 rRNA rRNA MGP_129S1SvImJ_T0013536.1 MGP_129S1SvImJ_G0011625.1 mouse_genomes_project 2 48489651 48490426 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057115.1 MGP_129S1SvImJ_G0026378.1 mouse_genomes_project 2 123896013 123915187 - MGP_129S1SvImJ_P0057115 Epb42 protein_coding protein_coding MGP_129S1SvImJ_T0057116.1 MGP_129S1SvImJ_G0026378.1 mouse_genomes_project 2 123896341 123905374 - Epb42 protein_coding processed_transcript MGP_129S1SvImJ_T0057117.1 MGP_129S1SvImJ_G0026378.1 mouse_genomes_project 2 123896341 123900925 - Epb42 protein_coding processed_transcript MGP_129S1SvImJ_T0057118.1 MGP_129S1SvImJ_G0026378.1 mouse_genomes_project 2 123897526 123900135 - Epb42 protein_coding retained_intron MGP_129S1SvImJ_T0057119.1 MGP_129S1SvImJ_G0026378.1 mouse_genomes_project 2 123901767 123914950 - MGP_129S1SvImJ_P0057119 Epb42 protein_coding protein_coding MGP_129S1SvImJ_T0057120.1 MGP_129S1SvImJ_G0026378.1 mouse_genomes_project 2 123905820 123914796 - Epb42 protein_coding processed_transcript MGP_129S1SvImJ_T0057121.1 MGP_129S1SvImJ_G0026378.1 mouse_genomes_project 2 123911517 123914860 - Epb42 protein_coding processed_transcript MGP_129S1SvImJ_T0013434.1 MGP_129S1SvImJ_G0011523.1 mouse_genomes_project 2 8270973 8271394 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013885.1 MGP_129S1SvImJ_G0011974.1 mouse_genomes_project 2 174075920 174076357 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013886.1 MGP_129S1SvImJ_G0011975.1 mouse_genomes_project 2 174270097 174270942 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100918.1 MGP_129S1SvImJ_G0038985.1 mouse_genomes_project 2 20638693 20638813 + Gm25544 snoRNA snoRNA MGP_129S1SvImJ_T0055794.1 MGP_129S1SvImJ_G0026000.1 mouse_genomes_project 2 88189917 88190874 + MGP_129S1SvImJ_P0055794 Olfr1112 protein_coding protein_coding MGP_129S1SvImJ_T0058152.1 MGP_129S1SvImJ_G0026616.1 mouse_genomes_project 2 153147734 153154545 + MGP_129S1SvImJ_P0058152 Cst8 protein_coding protein_coding MGP_129S1SvImJ_T0058153.1 MGP_129S1SvImJ_G0026616.1 mouse_genomes_project 2 153147783 153154545 + MGP_129S1SvImJ_P0058153 Cst8 protein_coding protein_coding MGP_129S1SvImJ_T0058154.1 MGP_129S1SvImJ_G0026616.1 mouse_genomes_project 2 153147852 153154545 + Cst8 protein_coding processed_transcript MGP_129S1SvImJ_T0052512.1 MGP_129S1SvImJ_G0025340.1 mouse_genomes_project 2 7507253 7606089 + MGP_129S1SvImJ_P0052512 Itih5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0059672.1 MGP_129S1SvImJ_G0026985.1 mouse_genomes_project 2 186567605 186585945 + protein_coding retained_intron MGP_129S1SvImJ_T0059673.1 MGP_129S1SvImJ_G0026985.1 mouse_genomes_project 2 186567609 186580710 + protein_coding retained_intron MGP_129S1SvImJ_T0059674.1 MGP_129S1SvImJ_G0026985.1 mouse_genomes_project 2 186567609 186585952 + MGP_129S1SvImJ_P0059674 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059675.1 MGP_129S1SvImJ_G0026985.1 mouse_genomes_project 2 186567625 186585974 + MGP_129S1SvImJ_P0059675 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0059676.1 MGP_129S1SvImJ_G0026985.1 mouse_genomes_project 2 186578834 186582896 + protein_coding retained_intron MGP_129S1SvImJ_T0059677.1 MGP_129S1SvImJ_G0026985.1 mouse_genomes_project 2 186583040 186585950 + protein_coding retained_intron MGP_129S1SvImJ_T0058468.1 MGP_129S1SvImJ_G0026714.1 mouse_genomes_project 2 159106720 159149602 - MGP_129S1SvImJ_P0058468 Snta1 protein_coding protein_coding MGP_129S1SvImJ_T0058469.1 MGP_129S1SvImJ_G0026714.1 mouse_genomes_project 2 159106720 159149584 - MGP_129S1SvImJ_P0058469 Snta1 protein_coding protein_coding MGP_129S1SvImJ_T0058470.1 MGP_129S1SvImJ_G0026714.1 mouse_genomes_project 2 159139799 159149483 - Snta1 protein_coding processed_transcript MGP_129S1SvImJ_T0059781.1 MGP_129S1SvImJ_G0027008.1 mouse_genomes_project 2 187554810 187586354 + MGP_129S1SvImJ_P0059781 Col20a1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0059782.1 MGP_129S1SvImJ_G0027008.1 mouse_genomes_project 2 187555087 187586354 + MGP_129S1SvImJ_P0059782 Col20a1 protein_coding protein_coding MGP_129S1SvImJ_T0059783.1 MGP_129S1SvImJ_G0027008.1 mouse_genomes_project 2 187555087 187587566 + MGP_129S1SvImJ_P0059783 Col20a1 protein_coding protein_coding MGP_129S1SvImJ_T0059784.1 MGP_129S1SvImJ_G0027008.1 mouse_genomes_project 2 187570497 187573502 + MGP_129S1SvImJ_P0059784 Col20a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059785.1 MGP_129S1SvImJ_G0027008.1 mouse_genomes_project 2 187583285 187587566 + MGP_129S1SvImJ_P0059785 Col20a1 protein_coding protein_coding MGP_129S1SvImJ_T0058304.1 MGP_129S1SvImJ_G0026659.1 mouse_genomes_project 2 156950010 156955345 - MGP_129S1SvImJ_P0058304 Zcchc3 protein_coding protein_coding MGP_129S1SvImJ_T0056610.1 MGP_129S1SvImJ_G0026242.1 mouse_genomes_project 2 112273622 112378395 + MGP_129S1SvImJ_P0056610 Lgr4 protein_coding protein_coding MGP_129S1SvImJ_T0056611.1 MGP_129S1SvImJ_G0026242.1 mouse_genomes_project 2 112273622 112378395 + MGP_129S1SvImJ_P0056611 Lgr4 protein_coding protein_coding MGP_129S1SvImJ_T0056612.1 MGP_129S1SvImJ_G0026242.1 mouse_genomes_project 2 112333581 112356011 + Lgr4 protein_coding processed_transcript MGP_129S1SvImJ_T0056613.1 MGP_129S1SvImJ_G0026242.1 mouse_genomes_project 2 112363396 112364329 + Lgr4 protein_coding retained_intron MGP_129S1SvImJ_T0054504.1 MGP_129S1SvImJ_G0025687.1 mouse_genomes_project 2 35784493 35785447 - MGP_129S1SvImJ_P0054504 Olfr362 protein_coding protein_coding MGP_129S1SvImJ_T0013479.1 MGP_129S1SvImJ_G0011568.1 mouse_genomes_project 2 23453113 23453354 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055717.1 MGP_129S1SvImJ_G0025927.1 mouse_genomes_project 2 86206900 86208757 - MGP_129S1SvImJ_P0055717 Olfr995 protein_coding protein_coding MGP_129S1SvImJ_T0007314.1 MGP_129S1SvImJ_G0005998.1 mouse_genomes_project 2 119577329 119581205 - Gm29340 lincRNA lincRNA MGP_129S1SvImJ_T0017852.1 MGP_129S1SvImJ_G0015450.1 mouse_genomes_project 2 106675894 106686220 + Platr14 processed_transcript processed_transcript MGP_129S1SvImJ_T0017853.1 MGP_129S1SvImJ_G0015450.1 mouse_genomes_project 2 106675910 106686217 + Platr14 processed_transcript processed_transcript MGP_129S1SvImJ_T0017854.1 MGP_129S1SvImJ_G0015450.1 mouse_genomes_project 2 106675915 106689593 + Platr14 processed_transcript processed_transcript MGP_129S1SvImJ_T0017855.1 MGP_129S1SvImJ_G0015450.1 mouse_genomes_project 2 106675923 106686293 + Platr14 processed_transcript processed_transcript MGP_129S1SvImJ_T0017856.1 MGP_129S1SvImJ_G0015450.1 mouse_genomes_project 2 106676190 106686214 + Platr14 processed_transcript processed_transcript MGP_129S1SvImJ_T0017857.1 MGP_129S1SvImJ_G0015450.1 mouse_genomes_project 2 106685360 106686996 + Platr14 processed_transcript processed_transcript MGP_129S1SvImJ_T0004118.1 MGP_129S1SvImJ_G0003645.1 mouse_genomes_project 2 136475321 136476579 - Gm14104 antisense antisense MGP_129S1SvImJ_T0007149.1 MGP_129S1SvImJ_G0005868.1 mouse_genomes_project 2 8732542 8737166 + Gm13293 lincRNA lincRNA MGP_129S1SvImJ_T0057399.1 MGP_129S1SvImJ_G0026439.1 mouse_genomes_project 2 129519337 129716268 - MGP_129S1SvImJ_P0057399 Atp8b4 protein_coding protein_coding MGP_129S1SvImJ_T0057400.1 MGP_129S1SvImJ_G0026439.1 mouse_genomes_project 2 129520900 129708008 - MGP_129S1SvImJ_P0057400 Atp8b4 protein_coding protein_coding MGP_129S1SvImJ_T0057401.1 MGP_129S1SvImJ_G0026439.1 mouse_genomes_project 2 129574610 129707988 - Atp8b4 protein_coding retained_intron MGP_129S1SvImJ_T0057402.1 MGP_129S1SvImJ_G0026439.1 mouse_genomes_project 2 129574656 129716410 - MGP_129S1SvImJ_P0057402 Atp8b4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057403.1 MGP_129S1SvImJ_G0026439.1 mouse_genomes_project 2 129597091 129717095 - MGP_129S1SvImJ_P0057403 Atp8b4 protein_coding protein_coding MGP_129S1SvImJ_T0003904.1 MGP_129S1SvImJ_G0003494.1 mouse_genomes_project 2 1155300 1164515 - 1700080N15Rik antisense antisense MGP_129S1SvImJ_T0003905.1 MGP_129S1SvImJ_G0003494.1 mouse_genomes_project 2 1155302 1164515 - 1700080N15Rik antisense antisense MGP_129S1SvImJ_T0003906.1 MGP_129S1SvImJ_G0003494.1 mouse_genomes_project 2 1158956 1164513 - 1700080N15Rik antisense antisense MGP_129S1SvImJ_T0053249.1 MGP_129S1SvImJ_G0025466.1 mouse_genomes_project 2 23619928 23623212 + MGP_129S1SvImJ_P0053249 Obp2a protein_coding protein_coding MGP_129S1SvImJ_T0013831.1 MGP_129S1SvImJ_G0011920.1 mouse_genomes_project 2 155383486 155383843 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055425.1 MGP_129S1SvImJ_G0025865.1 mouse_genomes_project 2 76805131 76806555 + Osbpl6 protein_coding processed_transcript MGP_129S1SvImJ_T0055426.1 MGP_129S1SvImJ_G0025865.1 mouse_genomes_project 2 76805161 76995087 + MGP_129S1SvImJ_P0055426 Osbpl6 protein_coding protein_coding MGP_129S1SvImJ_T0055427.1 MGP_129S1SvImJ_G0025865.1 mouse_genomes_project 2 76805161 76995091 + MGP_129S1SvImJ_P0055427 Osbpl6 protein_coding protein_coding MGP_129S1SvImJ_T0055428.1 MGP_129S1SvImJ_G0025865.1 mouse_genomes_project 2 76805181 76991040 + MGP_129S1SvImJ_P0055428 Osbpl6 protein_coding protein_coding MGP_129S1SvImJ_T0055429.1 MGP_129S1SvImJ_G0025865.1 mouse_genomes_project 2 76805184 76806091 + Osbpl6 protein_coding processed_transcript MGP_129S1SvImJ_T0055430.1 MGP_129S1SvImJ_G0025865.1 mouse_genomes_project 2 76892865 76935995 + Osbpl6 protein_coding processed_transcript MGP_129S1SvImJ_T0055431.1 MGP_129S1SvImJ_G0025865.1 mouse_genomes_project 2 76942772 76990489 + MGP_129S1SvImJ_P0055431 Osbpl6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055432.1 MGP_129S1SvImJ_G0025865.1 mouse_genomes_project 2 76962552 76974480 + Osbpl6 protein_coding processed_transcript MGP_129S1SvImJ_T0010373.1 MGP_129S1SvImJ_G0008489.1 mouse_genomes_project 2 7867358 7868089 + miRNA miRNA MGP_129S1SvImJ_T0058166.1 MGP_129S1SvImJ_G0026623.1 mouse_genomes_project 2 154219223 154291523 + MGP_129S1SvImJ_P0058166 Syndig1 protein_coding protein_coding MGP_129S1SvImJ_T0058168.1 MGP_129S1SvImJ_G0026623.1 mouse_genomes_project 2 154220800 154399584 + MGP_129S1SvImJ_P0058168 Syndig1 protein_coding protein_coding MGP_129S1SvImJ_T0058169.1 MGP_129S1SvImJ_G0026623.1 mouse_genomes_project 2 154220881 154291564 + MGP_129S1SvImJ_P0058169 Syndig1 protein_coding protein_coding MGP_129S1SvImJ_T0058170.1 MGP_129S1SvImJ_G0026623.1 mouse_genomes_project 2 154220913 154291560 + MGP_129S1SvImJ_P0058170 Syndig1 protein_coding protein_coding MGP_129S1SvImJ_T0058171.1 MGP_129S1SvImJ_G0026623.1 mouse_genomes_project 2 154220934 154291690 + MGP_129S1SvImJ_P0058171 Syndig1 protein_coding protein_coding MGP_129S1SvImJ_T0058172.1 MGP_129S1SvImJ_G0026623.1 mouse_genomes_project 2 154288030 154399584 + MGP_129S1SvImJ_P0058172 Syndig1 protein_coding protein_coding MGP_129S1SvImJ_T0013428.1 MGP_129S1SvImJ_G0011517.1 mouse_genomes_project 2 3280144 3282939 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059760.1 MGP_129S1SvImJ_G0027006.1 mouse_genomes_project 2 187501872 187521880 - MGP_129S1SvImJ_P0059760 Nkain4 protein_coding protein_coding MGP_129S1SvImJ_T0059761.1 MGP_129S1SvImJ_G0027006.1 mouse_genomes_project 2 187501872 187521880 - MGP_129S1SvImJ_P0059761 Nkain4 protein_coding protein_coding MGP_129S1SvImJ_T0059762.1 MGP_129S1SvImJ_G0027006.1 mouse_genomes_project 2 187501872 187510270 - MGP_129S1SvImJ_P0059762 Nkain4 protein_coding protein_coding MGP_129S1SvImJ_T0059763.1 MGP_129S1SvImJ_G0027006.1 mouse_genomes_project 2 187503090 187521801 - MGP_129S1SvImJ_P0059763 Nkain4 protein_coding protein_coding MGP_129S1SvImJ_T0059764.1 MGP_129S1SvImJ_G0027006.1 mouse_genomes_project 2 187504286 187521875 - MGP_129S1SvImJ_P0059764 Nkain4 protein_coding protein_coding MGP_129S1SvImJ_T0059765.1 MGP_129S1SvImJ_G0027006.1 mouse_genomes_project 2 187510356 187521500 - Nkain4 protein_coding processed_transcript MGP_129S1SvImJ_T0059766.1 MGP_129S1SvImJ_G0027006.1 mouse_genomes_project 2 187510933 187516778 - MGP_129S1SvImJ_P0059766 Nkain4 protein_coding protein_coding MGP_129S1SvImJ_T0057602.1 MGP_129S1SvImJ_G0026490.1 mouse_genomes_project 2 132999901 133016976 + Sirpa protein_coding processed_transcript MGP_129S1SvImJ_T0057603.1 MGP_129S1SvImJ_G0026490.1 mouse_genomes_project 2 132999905 133016979 + Sirpa protein_coding processed_transcript MGP_129S1SvImJ_T0057604.1 MGP_129S1SvImJ_G0026490.1 mouse_genomes_project 2 132999905 133038338 + MGP_129S1SvImJ_P0057604 Sirpa protein_coding protein_coding MGP_129S1SvImJ_T0057605.1 MGP_129S1SvImJ_G0026490.1 mouse_genomes_project 2 132999905 133022383 + MGP_129S1SvImJ_P0057605 Sirpa protein_coding protein_coding MGP_129S1SvImJ_T0057606.1 MGP_129S1SvImJ_G0026490.1 mouse_genomes_project 2 132999905 133038338 + MGP_129S1SvImJ_P0057606 Sirpa protein_coding protein_coding MGP_129S1SvImJ_T0057607.1 MGP_129S1SvImJ_G0026490.1 mouse_genomes_project 2 132999931 133017168 + Sirpa protein_coding processed_transcript MGP_129S1SvImJ_T0057608.1 MGP_129S1SvImJ_G0026490.1 mouse_genomes_project 2 132999980 133038346 + MGP_129S1SvImJ_P0057608 Sirpa protein_coding protein_coding MGP_129S1SvImJ_T0057609.1 MGP_129S1SvImJ_G0026490.1 mouse_genomes_project 2 133000261 133038338 + MGP_129S1SvImJ_P0057609 Sirpa protein_coding protein_coding MGP_129S1SvImJ_T0057610.1 MGP_129S1SvImJ_G0026490.1 mouse_genomes_project 2 133000271 133038346 + MGP_129S1SvImJ_P0057610 Sirpa protein_coding protein_coding MGP_129S1SvImJ_T0057611.1 MGP_129S1SvImJ_G0026490.1 mouse_genomes_project 2 133000621 133038346 + MGP_129S1SvImJ_P0057611 Sirpa protein_coding protein_coding MGP_129S1SvImJ_T0057612.1 MGP_129S1SvImJ_G0026490.1 mouse_genomes_project 2 133000628 133036707 + Sirpa protein_coding processed_transcript MGP_129S1SvImJ_T0057613.1 MGP_129S1SvImJ_G0026490.1 mouse_genomes_project 2 133000634 133036415 + MGP_129S1SvImJ_P0057613 Sirpa protein_coding protein_coding MGP_129S1SvImJ_T0057614.1 MGP_129S1SvImJ_G0026490.1 mouse_genomes_project 2 133000679 133036302 + MGP_129S1SvImJ_P0057614 Sirpa protein_coding protein_coding MGP_129S1SvImJ_T0057615.1 MGP_129S1SvImJ_G0026490.1 mouse_genomes_project 2 133026813 133034162 + Sirpa protein_coding retained_intron MGP_129S1SvImJ_T0017947.1 MGP_129S1SvImJ_G0015490.1 mouse_genomes_project 2 172898824 172901925 + 1110018N20Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017948.1 MGP_129S1SvImJ_G0015490.1 mouse_genomes_project 2 172899030 172902196 + 1110018N20Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017949.1 MGP_129S1SvImJ_G0015490.1 mouse_genomes_project 2 172899569 172902478 + 1110018N20Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0055821.1 MGP_129S1SvImJ_G0026019.1 mouse_genomes_project 2 88710199 88732532 - MGP_129S1SvImJ_P0055821 protein_coding protein_coding MGP_129S1SvImJ_T0055822.1 MGP_129S1SvImJ_G0026019.1 mouse_genomes_project 2 88729191 88732532 - protein_coding processed_transcript MGP_129S1SvImJ_T0013741.1 MGP_129S1SvImJ_G0011830.1 mouse_genomes_project 2 115858003 115858522 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053082.1 MGP_129S1SvImJ_G0025436.1 mouse_genomes_project 2 23156015 23157058 + MGP_129S1SvImJ_P0053082 Tmem210 protein_coding protein_coding MGP_129S1SvImJ_T0053083.1 MGP_129S1SvImJ_G0025436.1 mouse_genomes_project 2 23156071 23157060 + Tmem210 protein_coding processed_transcript MGP_129S1SvImJ_T0004038.1 MGP_129S1SvImJ_G0003594.1 mouse_genomes_project 2 75017423 75025880 - Hoxd3os1 antisense antisense MGP_129S1SvImJ_T0004039.1 MGP_129S1SvImJ_G0003594.1 mouse_genomes_project 2 75024002 75026352 - Hoxd3os1 antisense antisense MGP_129S1SvImJ_T0004040.1 MGP_129S1SvImJ_G0003594.1 mouse_genomes_project 2 75024152 75029819 - Hoxd3os1 antisense antisense MGP_129S1SvImJ_T0004041.1 MGP_129S1SvImJ_G0003594.1 mouse_genomes_project 2 75026951 75029953 - Hoxd3os1 antisense antisense MGP_129S1SvImJ_T0100989.1 MGP_129S1SvImJ_G0039056.1 mouse_genomes_project 2 163429231 163429362 - Gm24411 snoRNA snoRNA MGP_129S1SvImJ_T0001057.1 MGP_129S1SvImJ_G0000986.1 mouse_genomes_project 2 9802673 9804075 - TEC TEC MGP_129S1SvImJ_T0057102.1 MGP_129S1SvImJ_G0026376.1 mouse_genomes_project 2 123849319 123884551 + MGP_129S1SvImJ_P0057102 Tmem62 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057103.1 MGP_129S1SvImJ_G0026376.1 mouse_genomes_project 2 123849601 123884543 + MGP_129S1SvImJ_P0057103 Tmem62 protein_coding protein_coding MGP_129S1SvImJ_T0057104.1 MGP_129S1SvImJ_G0026376.1 mouse_genomes_project 2 123849972 123852844 + Tmem62 protein_coding retained_intron MGP_129S1SvImJ_T0057105.1 MGP_129S1SvImJ_G0026376.1 mouse_genomes_project 2 123853306 123863709 + Tmem62 protein_coding processed_transcript MGP_129S1SvImJ_T0057106.1 MGP_129S1SvImJ_G0026376.1 mouse_genomes_project 2 123856596 123859186 + Tmem62 protein_coding processed_transcript MGP_129S1SvImJ_T0057107.1 MGP_129S1SvImJ_G0026376.1 mouse_genomes_project 2 123869612 123883742 + Tmem62 protein_coding retained_intron MGP_129S1SvImJ_T0059280.1 MGP_129S1SvImJ_G0026890.1 mouse_genomes_project 2 170838679 170871279 - MGP_129S1SvImJ_P0059280 Elmo2 protein_coding protein_coding MGP_129S1SvImJ_T0059281.1 MGP_129S1SvImJ_G0026890.1 mouse_genomes_project 2 170839803 170847462 - MGP_129S1SvImJ_P0059281 Elmo2 protein_coding protein_coding MGP_129S1SvImJ_T0059282.1 MGP_129S1SvImJ_G0026890.1 mouse_genomes_project 2 170839803 170876927 - MGP_129S1SvImJ_P0059282 Elmo2 protein_coding protein_coding MGP_129S1SvImJ_T0059283.1 MGP_129S1SvImJ_G0026890.1 mouse_genomes_project 2 170839803 170876927 - MGP_129S1SvImJ_P0059283 Elmo2 protein_coding protein_coding MGP_129S1SvImJ_T0059284.1 MGP_129S1SvImJ_G0026890.1 mouse_genomes_project 2 170841741 170876927 - MGP_129S1SvImJ_P0059284 Elmo2 protein_coding protein_coding MGP_129S1SvImJ_T0059285.1 MGP_129S1SvImJ_G0026890.1 mouse_genomes_project 2 170841746 170867348 - MGP_129S1SvImJ_P0059285 Elmo2 protein_coding protein_coding MGP_129S1SvImJ_T0059286.1 MGP_129S1SvImJ_G0026890.1 mouse_genomes_project 2 170848765 170864751 - Elmo2 protein_coding processed_transcript MGP_129S1SvImJ_T0059287.1 MGP_129S1SvImJ_G0026890.1 mouse_genomes_project 2 170849154 170862201 - MGP_129S1SvImJ_P0059287 Elmo2 protein_coding protein_coding MGP_129S1SvImJ_T0059288.1 MGP_129S1SvImJ_G0026890.1 mouse_genomes_project 2 170855155 170862091 - Elmo2 protein_coding retained_intron MGP_129S1SvImJ_T0059289.1 MGP_129S1SvImJ_G0026890.1 mouse_genomes_project 2 170859361 170866796 - MGP_129S1SvImJ_P0059289 Elmo2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059290.1 MGP_129S1SvImJ_G0026890.1 mouse_genomes_project 2 170862128 170867020 - MGP_129S1SvImJ_P0059290 Elmo2 protein_coding protein_coding MGP_129S1SvImJ_T0059291.1 MGP_129S1SvImJ_G0026890.1 mouse_genomes_project 2 170866116 170876927 - MGP_129S1SvImJ_P0059291 Elmo2 protein_coding protein_coding MGP_129S1SvImJ_T0004176.1 MGP_129S1SvImJ_G0003692.1 mouse_genomes_project 2 169571222 169592363 + A730032A03Rik antisense antisense MGP_129S1SvImJ_T0004177.1 MGP_129S1SvImJ_G0003692.1 mouse_genomes_project 2 169588500 169592363 + A730032A03Rik antisense antisense MGP_129S1SvImJ_T0058319.1 MGP_129S1SvImJ_G0026671.1 mouse_genomes_project 2 157167559 157175755 + MGP_129S1SvImJ_P0058319 Defb36 protein_coding protein_coding MGP_129S1SvImJ_T0052968.1 MGP_129S1SvImJ_G0025415.1 mouse_genomes_project 2 22806756 22816449 + MGP_129S1SvImJ_P0052968 Dph7 protein_coding protein_coding MGP_129S1SvImJ_T0052969.1 MGP_129S1SvImJ_G0025415.1 mouse_genomes_project 2 22806778 22816447 + MGP_129S1SvImJ_P0052969 Dph7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052970.1 MGP_129S1SvImJ_G0025415.1 mouse_genomes_project 2 22806779 22813204 + MGP_129S1SvImJ_P0052970 Dph7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052971.1 MGP_129S1SvImJ_G0025415.1 mouse_genomes_project 2 22806797 22810919 + MGP_129S1SvImJ_P0052971 Dph7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052972.1 MGP_129S1SvImJ_G0025415.1 mouse_genomes_project 2 22806808 22810874 + MGP_129S1SvImJ_P0052972 Dph7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052973.1 MGP_129S1SvImJ_G0025415.1 mouse_genomes_project 2 22806822 22816449 + Dph7 protein_coding retained_intron MGP_129S1SvImJ_T0052974.1 MGP_129S1SvImJ_G0025415.1 mouse_genomes_project 2 22806829 22813957 + MGP_129S1SvImJ_P0052974 Dph7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0003958.1 MGP_129S1SvImJ_G0003534.1 mouse_genomes_project 2 28040121 28041720 - 2600006K01Rik antisense antisense MGP_129S1SvImJ_T0056154.1 MGP_129S1SvImJ_G0026155.1 mouse_genomes_project 2 93031804 93056476 - MGP_129S1SvImJ_P0056154 Atg13 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0056155.1 MGP_129S1SvImJ_G0026155.1 mouse_genomes_project 2 93031807 93073947 - MGP_129S1SvImJ_P0056155 Atg13 protein_coding protein_coding MGP_129S1SvImJ_T0056156.1 MGP_129S1SvImJ_G0026155.1 mouse_genomes_project 2 93031808 93073890 - MGP_129S1SvImJ_P0056156 Atg13 protein_coding protein_coding MGP_129S1SvImJ_T0056157.1 MGP_129S1SvImJ_G0026155.1 mouse_genomes_project 2 93033472 93036942 - Atg13 protein_coding processed_transcript MGP_129S1SvImJ_T0056158.1 MGP_129S1SvImJ_G0026155.1 mouse_genomes_project 2 93033507 93039466 - Atg13 protein_coding processed_transcript MGP_129S1SvImJ_T0056159.1 MGP_129S1SvImJ_G0026155.1 mouse_genomes_project 2 93036572 93042489 - Atg13 protein_coding processed_transcript MGP_129S1SvImJ_T0056160.1 MGP_129S1SvImJ_G0026155.1 mouse_genomes_project 2 93047822 93066796 - Atg13 protein_coding processed_transcript MGP_129S1SvImJ_T0057598.1 MGP_129S1SvImJ_G0026488.1 mouse_genomes_project 2 132756356 132762923 - MGP_129S1SvImJ_P0057598 Il1b protein_coding protein_coding MGP_129S1SvImJ_T0057599.1 MGP_129S1SvImJ_G0026488.1 mouse_genomes_project 2 132756908 132759139 - Il1b protein_coding processed_transcript MGP_129S1SvImJ_T0057600.1 MGP_129S1SvImJ_G0026488.1 mouse_genomes_project 2 132761516 132762923 - Il1b protein_coding retained_intron MGP_129S1SvImJ_T0013903.1 MGP_129S1SvImJ_G0011992.1 mouse_genomes_project 2 187874323 187875111 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017945.1 MGP_129S1SvImJ_G0015488.1 mouse_genomes_project 2 167928980 167934921 + 9430021M05Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0102399.1 MGP_129S1SvImJ_G0040233.1 mouse_genomes_project 2 86407941 86408886 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0055269.1 MGP_129S1SvImJ_G0025826.1 mouse_genomes_project 2 71903533 71981157 + Itga6 protein_coding processed_transcript MGP_129S1SvImJ_T0055270.1 MGP_129S1SvImJ_G0025826.1 mouse_genomes_project 2 71947918 71981846 + Itga6 protein_coding processed_transcript MGP_129S1SvImJ_T0055271.1 MGP_129S1SvImJ_G0025826.1 mouse_genomes_project 2 71947929 72019296 + MGP_129S1SvImJ_P0055271 Itga6 protein_coding protein_coding MGP_129S1SvImJ_T0055272.1 MGP_129S1SvImJ_G0025826.1 mouse_genomes_project 2 71948128 72020859 + MGP_129S1SvImJ_P0055272 Itga6 protein_coding protein_coding MGP_129S1SvImJ_T0055273.1 MGP_129S1SvImJ_G0025826.1 mouse_genomes_project 2 71998980 71999814 + Itga6 protein_coding processed_transcript MGP_129S1SvImJ_T0055274.1 MGP_129S1SvImJ_G0025826.1 mouse_genomes_project 2 72009928 72020924 + Itga6 protein_coding processed_transcript MGP_129S1SvImJ_T0102394.1 MGP_129S1SvImJ_G0040228.1 mouse_genomes_project 2 84982484 84983457 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0003933.1 MGP_129S1SvImJ_G0003517.1 mouse_genomes_project 2 18758159 18759103 + Gm13375 antisense antisense MGP_129S1SvImJ_T0059932.1 MGP_129S1SvImJ_G0027031.1 mouse_genomes_project 2 188206732 188210727 - MGP_129S1SvImJ_P0059932 Samd10 protein_coding protein_coding MGP_129S1SvImJ_T0059933.1 MGP_129S1SvImJ_G0027031.1 mouse_genomes_project 2 188206735 188210713 - MGP_129S1SvImJ_P0059933 Samd10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059934.1 MGP_129S1SvImJ_G0027031.1 mouse_genomes_project 2 188208306 188209121 - Samd10 protein_coding retained_intron MGP_129S1SvImJ_T0007282.1 MGP_129S1SvImJ_G0005974.1 mouse_genomes_project 2 103751795 103764186 + Gm13905 lincRNA lincRNA MGP_129S1SvImJ_T0102027.1 MGP_129S1SvImJ_G0027023.1 mouse_genomes_project 2 187973255 187976581 + unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0102028.1 MGP_129S1SvImJ_G0027023.1 mouse_genomes_project 2 187973416 187976194 + unitary_pseudogene unitary_pseudogene MGP_129S1SvImJ_T0100944.1 MGP_129S1SvImJ_G0039011.1 mouse_genomes_project 2 61138244 61138373 + Gm22338 snoRNA snoRNA MGP_129S1SvImJ_T0010455.1 MGP_129S1SvImJ_G0008571.1 mouse_genomes_project 2 95800160 95800260 - Mir670 miRNA miRNA MGP_129S1SvImJ_T0054359.1 MGP_129S1SvImJ_G0025643.1 mouse_genomes_project 2 33464680 33485876 - MGP_129S1SvImJ_P0054359 Psmd5 protein_coding protein_coding MGP_129S1SvImJ_T0054360.1 MGP_129S1SvImJ_G0025643.1 mouse_genomes_project 2 33467048 33485847 - Psmd5 protein_coding retained_intron MGP_129S1SvImJ_T0054361.1 MGP_129S1SvImJ_G0025643.1 mouse_genomes_project 2 33467389 33472638 - MGP_129S1SvImJ_P0054361 Psmd5 protein_coding protein_coding MGP_129S1SvImJ_T0054362.1 MGP_129S1SvImJ_G0025643.1 mouse_genomes_project 2 33481852 33489882 - Psmd5 protein_coding processed_transcript MGP_129S1SvImJ_T0054363.1 MGP_129S1SvImJ_G0025643.1 mouse_genomes_project 2 33486021 33487124 - Psmd5 protein_coding processed_transcript MGP_129S1SvImJ_T0007258.1 MGP_129S1SvImJ_G0005954.1 mouse_genomes_project 2 80002157 80009284 + Gm26755 lincRNA lincRNA MGP_129S1SvImJ_T0056962.1 MGP_129S1SvImJ_G0026355.1 mouse_genomes_project 2 122826982 122882371 + MGP_129S1SvImJ_P0056962 Mapkbp1 protein_coding protein_coding MGP_129S1SvImJ_T0056963.1 MGP_129S1SvImJ_G0026355.1 mouse_genomes_project 2 122827337 122882365 + MGP_129S1SvImJ_P0056963 Mapkbp1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0056964.1 MGP_129S1SvImJ_G0026355.1 mouse_genomes_project 2 122866534 122867943 + Mapkbp1 protein_coding retained_intron MGP_129S1SvImJ_T0056965.1 MGP_129S1SvImJ_G0026355.1 mouse_genomes_project 2 122867891 122870490 + Mapkbp1 protein_coding retained_intron MGP_129S1SvImJ_T0056966.1 MGP_129S1SvImJ_G0026355.1 mouse_genomes_project 2 122877038 122878012 + Mapkbp1 protein_coding retained_intron MGP_129S1SvImJ_T0052499.1 MGP_129S1SvImJ_G0025337.1 mouse_genomes_project 2 7408315 7433068 - MGP_129S1SvImJ_P0052499 Atp5c1 protein_coding protein_coding MGP_129S1SvImJ_T0052500.1 MGP_129S1SvImJ_G0025337.1 mouse_genomes_project 2 7408325 7433123 - MGP_129S1SvImJ_P0052500 Atp5c1 protein_coding protein_coding MGP_129S1SvImJ_T0052501.1 MGP_129S1SvImJ_G0025337.1 mouse_genomes_project 2 7408329 7433085 - MGP_129S1SvImJ_P0052501 Atp5c1 protein_coding protein_coding MGP_129S1SvImJ_T0052502.1 MGP_129S1SvImJ_G0025337.1 mouse_genomes_project 2 7408329 7433151 - MGP_129S1SvImJ_P0052502 Atp5c1 protein_coding protein_coding MGP_129S1SvImJ_T0052503.1 MGP_129S1SvImJ_G0025337.1 mouse_genomes_project 2 7415607 7432500 - MGP_129S1SvImJ_P0052503 Atp5c1 protein_coding protein_coding MGP_129S1SvImJ_T0052504.1 MGP_129S1SvImJ_G0025337.1 mouse_genomes_project 2 7415751 7432817 - MGP_129S1SvImJ_P0052504 Atp5c1 protein_coding protein_coding MGP_129S1SvImJ_T0052505.1 MGP_129S1SvImJ_G0025337.1 mouse_genomes_project 2 7416804 7432696 - MGP_129S1SvImJ_P0052505 Atp5c1 protein_coding protein_coding MGP_129S1SvImJ_T0013602.1 MGP_129S1SvImJ_G0011691.1 mouse_genomes_project 2 71920161 71920691 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001088.1 MGP_129S1SvImJ_G0001017.1 mouse_genomes_project 2 34428373 34431388 - TEC TEC MGP_129S1SvImJ_T0007291.1 MGP_129S1SvImJ_G0005980.1 mouse_genomes_project 2 107639858 107640715 + 4930527A07Rik lincRNA lincRNA MGP_129S1SvImJ_T0057487.1 MGP_129S1SvImJ_G0026456.1 mouse_genomes_project 2 130626778 130628996 + MGP_129S1SvImJ_P0057487 Dusp2 protein_coding protein_coding MGP_129S1SvImJ_T0057488.1 MGP_129S1SvImJ_G0026456.1 mouse_genomes_project 2 130627229 130628124 + Dusp2 protein_coding retained_intron MGP_129S1SvImJ_T0013488.1 MGP_129S1SvImJ_G0011577.1 mouse_genomes_project 2 29901492 29902287 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0052706.1 MGP_129S1SvImJ_G0025369.1 mouse_genomes_project 2 14968880 15376515 - MGP_129S1SvImJ_P0052706 protein_coding protein_coding MGP_129S1SvImJ_T0052707.1 MGP_129S1SvImJ_G0025369.1 mouse_genomes_project 2 14969025 15094768 - MGP_129S1SvImJ_P0052707 protein_coding protein_coding MGP_129S1SvImJ_T0052708.1 MGP_129S1SvImJ_G0025369.1 mouse_genomes_project 2 14973665 14987530 - protein_coding processed_transcript MGP_129S1SvImJ_T0052709.1 MGP_129S1SvImJ_G0025369.1 mouse_genomes_project 2 14973665 15094374 - MGP_129S1SvImJ_P0052709 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0052710.1 MGP_129S1SvImJ_G0025369.1 mouse_genomes_project 2 14975726 15164950 - MGP_129S1SvImJ_P0052710 protein_coding protein_coding MGP_129S1SvImJ_T0052711.1 MGP_129S1SvImJ_G0025369.1 mouse_genomes_project 2 15003405 15020191 - protein_coding processed_transcript MGP_129S1SvImJ_T0052712.1 MGP_129S1SvImJ_G0025369.1 mouse_genomes_project 2 15005023 15020234 - protein_coding processed_transcript MGP_129S1SvImJ_T0052713.1 MGP_129S1SvImJ_G0025369.1 mouse_genomes_project 2 15005280 15020260 - MGP_129S1SvImJ_P0052713 protein_coding protein_coding MGP_129S1SvImJ_T0052714.1 MGP_129S1SvImJ_G0025369.1 mouse_genomes_project 2 15008000 15020221 - protein_coding processed_transcript MGP_129S1SvImJ_T0052715.1 MGP_129S1SvImJ_G0025369.1 mouse_genomes_project 2 15022154 15096623 - MGP_129S1SvImJ_P0052715 protein_coding protein_coding MGP_129S1SvImJ_T0052716.1 MGP_129S1SvImJ_G0025369.1 mouse_genomes_project 2 15022157 15096625 - MGP_129S1SvImJ_P0052716 protein_coding protein_coding MGP_129S1SvImJ_T0052717.1 MGP_129S1SvImJ_G0025369.1 mouse_genomes_project 2 15026246 15094457 - MGP_129S1SvImJ_P0052717 protein_coding protein_coding MGP_129S1SvImJ_T0052718.1 MGP_129S1SvImJ_G0025369.1 mouse_genomes_project 2 15065852 15163294 - protein_coding processed_transcript MGP_129S1SvImJ_T0052719.1 MGP_129S1SvImJ_G0025369.1 mouse_genomes_project 2 15372857 15376936 - protein_coding processed_transcript MGP_129S1SvImJ_T0057370.1 MGP_129S1SvImJ_G0026431.1 mouse_genomes_project 2 128828367 128872864 - MGP_129S1SvImJ_P0057370 Shc4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0057371.1 MGP_129S1SvImJ_G0026431.1 mouse_genomes_project 2 128828375 128925531 - MGP_129S1SvImJ_P0057371 Shc4 protein_coding protein_coding MGP_129S1SvImJ_T0057373.1 MGP_129S1SvImJ_G0026431.1 mouse_genomes_project 2 128891859 128926292 - Shc4 protein_coding retained_intron MGP_129S1SvImJ_T0055922.1 MGP_129S1SvImJ_G0026105.1 mouse_genomes_project 2 90832409 90833690 - MGP_129S1SvImJ_P0055922 Olfr1249 protein_coding protein_coding MGP_129S1SvImJ_T0007280.1 MGP_129S1SvImJ_G0005972.1 mouse_genomes_project 2 98634113 98734345 - 4930445B16Rik lincRNA lincRNA MGP_129S1SvImJ_T0059532.1 MGP_129S1SvImJ_G0026945.1 mouse_genomes_project 2 178612909 178642654 + MGP_129S1SvImJ_P0059532 Rtfdc1 protein_coding protein_coding MGP_129S1SvImJ_T0059533.1 MGP_129S1SvImJ_G0026945.1 mouse_genomes_project 2 178612955 178639371 + Rtfdc1 protein_coding retained_intron MGP_129S1SvImJ_T0059536.1 MGP_129S1SvImJ_G0026945.1 mouse_genomes_project 2 178625425 178642654 + Rtfdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0013463.1 MGP_129S1SvImJ_G0011552.1 mouse_genomes_project 2 17724567 17725998 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013622.1 MGP_129S1SvImJ_G0011711.1 mouse_genomes_project 2 78990635 78991274 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0052439.1 MGP_129S1SvImJ_G0025327.1 mouse_genomes_project 2 3029475 3083090 - MGP_129S1SvImJ_P0052439 Dhtkd1 protein_coding protein_coding MGP_129S1SvImJ_T0052440.1 MGP_129S1SvImJ_G0025327.1 mouse_genomes_project 2 3031940 3083041 - MGP_129S1SvImJ_P0052440 Dhtkd1 protein_coding protein_coding MGP_129S1SvImJ_T0052441.1 MGP_129S1SvImJ_G0025327.1 mouse_genomes_project 2 3040610 3048985 - Dhtkd1 protein_coding processed_transcript MGP_129S1SvImJ_T0102437.1 MGP_129S1SvImJ_G0040271.1 mouse_genomes_project 2 111816089 111837757 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0058777.1 MGP_129S1SvImJ_G0026765.1 mouse_genomes_project 2 161450655 161472703 + MGP_129S1SvImJ_P0058777 Aar2 protein_coding protein_coding MGP_129S1SvImJ_T0058778.1 MGP_129S1SvImJ_G0026765.1 mouse_genomes_project 2 161450667 161473520 + MGP_129S1SvImJ_P0058778 Aar2 protein_coding protein_coding MGP_129S1SvImJ_T0058779.1 MGP_129S1SvImJ_G0026765.1 mouse_genomes_project 2 161450679 161453764 + Aar2 protein_coding processed_transcript MGP_129S1SvImJ_T0058780.1 MGP_129S1SvImJ_G0026765.1 mouse_genomes_project 2 161450681 161454145 + MGP_129S1SvImJ_P0058780 Aar2 protein_coding protein_coding MGP_129S1SvImJ_T0058781.1 MGP_129S1SvImJ_G0026765.1 mouse_genomes_project 2 161450695 161453898 + MGP_129S1SvImJ_P0058781 Aar2 protein_coding protein_coding MGP_129S1SvImJ_T0004145.1 MGP_129S1SvImJ_G0003666.1 mouse_genomes_project 2 156600040 156601994 - AA387200 antisense antisense MGP_129S1SvImJ_T0013423.1 MGP_129S1SvImJ_G0011512.1 mouse_genomes_project 2 2042120 2042335 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056233.1 MGP_129S1SvImJ_G0026165.1 mouse_genomes_project 2 93805339 93811880 + Pex16 protein_coding processed_transcript MGP_129S1SvImJ_T0056234.1 MGP_129S1SvImJ_G0026165.1 mouse_genomes_project 2 93805969 93811881 + MGP_129S1SvImJ_P0056234 Pex16 protein_coding protein_coding MGP_129S1SvImJ_T0056235.1 MGP_129S1SvImJ_G0026165.1 mouse_genomes_project 2 93806156 93809985 + Pex16 protein_coding processed_transcript MGP_129S1SvImJ_T0056236.1 MGP_129S1SvImJ_G0026165.1 mouse_genomes_project 2 93806222 93807367 + Pex16 protein_coding processed_transcript MGP_129S1SvImJ_T0098563.1 MGP_129S1SvImJ_G0036648.1 mouse_genomes_project 2 94882713 94882816 - Gm23380 rRNA rRNA MGP_129S1SvImJ_T0007426.1 MGP_129S1SvImJ_G0006093.1 mouse_genomes_project 2 176073823 176084826 - A630075F10Rik lincRNA lincRNA MGP_129S1SvImJ_T0010459.1 MGP_129S1SvImJ_G0008575.1 mouse_genomes_project 2 106531069 106531149 - Mir1902 miRNA miRNA MGP_129S1SvImJ_T0007367.1 MGP_129S1SvImJ_G0006043.1 mouse_genomes_project 2 156243637 156246038 - 4930556L07Rik lincRNA lincRNA MGP_129S1SvImJ_T0057547.1 MGP_129S1SvImJ_G0026473.1 mouse_genomes_project 2 131931522 131935583 + MGP_129S1SvImJ_P0057547 protein_coding protein_coding MGP_129S1SvImJ_T0057548.1 MGP_129S1SvImJ_G0026473.1 mouse_genomes_project 2 131931585 131941060 + MGP_129S1SvImJ_P0057548 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057549.1 MGP_129S1SvImJ_G0026473.1 mouse_genomes_project 2 131935903 131938560 + MGP_129S1SvImJ_P0057549 protein_coding protein_coding MGP_129S1SvImJ_T0013438.1 MGP_129S1SvImJ_G0011527.1 mouse_genomes_project 2 9027071 9028335 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007398.1 MGP_129S1SvImJ_G0006071.1 mouse_genomes_project 2 171921576 171942479 + Gm11468 lincRNA lincRNA MGP_129S1SvImJ_T0058145.1 MGP_129S1SvImJ_G0026612.1 mouse_genomes_project 2 153101947 153107112 + MGP_129S1SvImJ_P0058145 Cstl1 protein_coding protein_coding MGP_129S1SvImJ_T0058146.1 MGP_129S1SvImJ_G0026612.1 mouse_genomes_project 2 153101950 153107057 + MGP_129S1SvImJ_P0058146 Cstl1 protein_coding protein_coding MGP_129S1SvImJ_T0058147.1 MGP_129S1SvImJ_G0026612.1 mouse_genomes_project 2 153101985 153107057 + MGP_129S1SvImJ_P0058147 Cstl1 protein_coding protein_coding MGP_129S1SvImJ_T0017831.1 MGP_129S1SvImJ_G0015439.1 mouse_genomes_project 2 89918713 89922374 - Gm13760 processed_transcript processed_transcript MGP_129S1SvImJ_T0017832.1 MGP_129S1SvImJ_G0015439.1 mouse_genomes_project 2 89919023 89922846 - Gm13760 processed_transcript processed_transcript MGP_129S1SvImJ_T0010380.1 MGP_129S1SvImJ_G0008496.1 mouse_genomes_project 2 7875309 7875405 + Mir669o miRNA miRNA MGP_129S1SvImJ_T0099713.1 MGP_129S1SvImJ_G0037780.1 mouse_genomes_project 2 172444584 172444687 + Gm24477 snRNA snRNA MGP_129S1SvImJ_T0058443.1 MGP_129S1SvImJ_G0026705.1 mouse_genomes_project 2 158719185 158726992 + MGP_129S1SvImJ_P0058443 Bpifa2 protein_coding protein_coding MGP_129S1SvImJ_T0058444.1 MGP_129S1SvImJ_G0026705.1 mouse_genomes_project 2 158719196 158725357 + MGP_129S1SvImJ_P0058444 Bpifa2 protein_coding protein_coding MGP_129S1SvImJ_T0058445.1 MGP_129S1SvImJ_G0026705.1 mouse_genomes_project 2 158724626 158726523 + Bpifa2 protein_coding retained_intron MGP_129S1SvImJ_T0058446.1 MGP_129S1SvImJ_G0026705.1 mouse_genomes_project 2 158725508 158726989 + Bpifa2 protein_coding retained_intron MGP_129S1SvImJ_T0004015.1 MGP_129S1SvImJ_G0003580.1 mouse_genomes_project 2 70536727 70615613 - Gad1os antisense antisense MGP_129S1SvImJ_T0004016.1 MGP_129S1SvImJ_G0003580.1 mouse_genomes_project 2 70537031 70538256 - Gad1os antisense antisense MGP_129S1SvImJ_T0099673.1 MGP_129S1SvImJ_G0037740.1 mouse_genomes_project 2 52670516 52670622 - Gm25898 snRNA snRNA MGP_129S1SvImJ_T0056645.1 MGP_129S1SvImJ_G0026260.1 mouse_genomes_project 2 113745054 113746155 + MGP_129S1SvImJ_P0056645 protein_coding protein_coding MGP_129S1SvImJ_T0004005.1 MGP_129S1SvImJ_G0003571.1 mouse_genomes_project 2 65325662 65328995 + Gm13595 antisense antisense MGP_129S1SvImJ_T0054803.1 MGP_129S1SvImJ_G0025739.1 mouse_genomes_project 2 52581362 52613078 + Arl6ip6 protein_coding processed_transcript MGP_129S1SvImJ_T0054804.1 MGP_129S1SvImJ_G0025739.1 mouse_genomes_project 2 52581724 52614762 + MGP_129S1SvImJ_P0054804 Arl6ip6 protein_coding protein_coding MGP_129S1SvImJ_T0098856.1 MGP_129S1SvImJ_G0036935.1 mouse_genomes_project 2 4121431 4123972 - Gm10855 sense_intronic sense_intronic MGP_129S1SvImJ_T0052311.1 MGP_129S1SvImJ_G0025305.1 mouse_genomes_project 2 297096 304977 + MGP_129S1SvImJ_P0052311 Acbd7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0052312.1 MGP_129S1SvImJ_G0025305.1 mouse_genomes_project 2 300379 305199 + MGP_129S1SvImJ_P0052312 Acbd7 protein_coding protein_coding MGP_129S1SvImJ_T0010472.1 MGP_129S1SvImJ_G0008588.1 mouse_genomes_project 2 131193450 131193576 + Gm22411 miRNA miRNA MGP_129S1SvImJ_T0058311.1 MGP_129S1SvImJ_G0026664.1 mouse_genomes_project 2 157070490 157074259 - MGP_129S1SvImJ_P0058311 Defb26 protein_coding protein_coding MGP_129S1SvImJ_T0054659.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44056915 44196466 - MGP_129S1SvImJ_P0054659 Zeb2 protein_coding protein_coding MGP_129S1SvImJ_T0054660.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44060410 44190370 - MGP_129S1SvImJ_P0054660 Zeb2 protein_coding protein_coding MGP_129S1SvImJ_T0054661.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44060412 44190664 - MGP_129S1SvImJ_P0054661 Zeb2 protein_coding protein_coding MGP_129S1SvImJ_T0054662.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44060412 44187925 - MGP_129S1SvImJ_P0054662 Zeb2 protein_coding protein_coding MGP_129S1SvImJ_T0054663.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44061623 44190387 - MGP_129S1SvImJ_P0054663 Zeb2 protein_coding protein_coding MGP_129S1SvImJ_T0054664.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44061689 44187698 - MGP_129S1SvImJ_P0054664 Zeb2 protein_coding protein_coding MGP_129S1SvImJ_T0054665.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44061730 44190275 - MGP_129S1SvImJ_P0054665 Zeb2 protein_coding protein_coding MGP_129S1SvImJ_T0054666.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44070059 44187862 - MGP_129S1SvImJ_P0054666 Zeb2 protein_coding protein_coding MGP_129S1SvImJ_T0054667.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44074948 44188584 - MGP_129S1SvImJ_P0054667 Zeb2 protein_coding protein_coding MGP_129S1SvImJ_T0054668.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44074973 44096163 - MGP_129S1SvImJ_P0054668 Zeb2 protein_coding protein_coding MGP_129S1SvImJ_T0054669.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44075039 44187654 - MGP_129S1SvImJ_P0054669 Zeb2 protein_coding protein_coding MGP_129S1SvImJ_T0054670.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44075938 44128203 - Zeb2 protein_coding processed_transcript MGP_129S1SvImJ_T0054671.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44075940 44188566 - MGP_129S1SvImJ_P0054671 Zeb2 protein_coding protein_coding MGP_129S1SvImJ_T0054672.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44081813 44188486 - Zeb2 protein_coding processed_transcript MGP_129S1SvImJ_T0054673.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44090678 44190653 - MGP_129S1SvImJ_P0054673 Zeb2 protein_coding protein_coding MGP_129S1SvImJ_T0054674.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44094075 44190474 - Zeb2 protein_coding retained_intron MGP_129S1SvImJ_T0054675.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44094154 44190630 - Zeb2 protein_coding retained_intron MGP_129S1SvImJ_T0054676.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44096151 44188037 - MGP_129S1SvImJ_P0054676 Zeb2 protein_coding protein_coding MGP_129S1SvImJ_T0054677.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44096236 44190669 - MGP_129S1SvImJ_P0054677 Zeb2 protein_coding protein_coding MGP_129S1SvImJ_T0054678.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44096307 44188164 - MGP_129S1SvImJ_P0054678 Zeb2 protein_coding protein_coding MGP_129S1SvImJ_T0054679.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44169552 44188143 - MGP_129S1SvImJ_P0054679 Zeb2 protein_coding protein_coding MGP_129S1SvImJ_T0054680.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44181464 44190633 - Zeb2 protein_coding processed_transcript MGP_129S1SvImJ_T0054681.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44181464 44187897 - Zeb2 protein_coding processed_transcript MGP_129S1SvImJ_T0054682.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44181464 44190601 - Zeb2 protein_coding processed_transcript MGP_129S1SvImJ_T0054683.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44182691 44187486 - Zeb2 protein_coding processed_transcript MGP_129S1SvImJ_T0054684.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44183552 44187894 - Zeb2 protein_coding processed_transcript MGP_129S1SvImJ_T0054685.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44183911 44190386 - Zeb2 protein_coding retained_intron MGP_129S1SvImJ_T0054686.1 MGP_129S1SvImJ_G0025718.1 mouse_genomes_project 2 44187498 44191897 - Zeb2 protein_coding processed_transcript MGP_129S1SvImJ_T0056161.1 MGP_129S1SvImJ_G0026156.1 mouse_genomes_project 2 93074222 93075697 + MGP_129S1SvImJ_P0056161 Harbi1 protein_coding protein_coding MGP_129S1SvImJ_T0056162.1 MGP_129S1SvImJ_G0026156.1 mouse_genomes_project 2 93074223 93076095 + MGP_129S1SvImJ_P0056162 Harbi1 protein_coding protein_coding MGP_129S1SvImJ_T0056163.1 MGP_129S1SvImJ_G0026156.1 mouse_genomes_project 2 93074287 93078800 + MGP_129S1SvImJ_P0056163 Harbi1 protein_coding protein_coding MGP_129S1SvImJ_T0056164.1 MGP_129S1SvImJ_G0026156.1 mouse_genomes_project 2 93074292 93084915 + MGP_129S1SvImJ_P0056164 Harbi1 protein_coding protein_coding MGP_129S1SvImJ_T0056165.1 MGP_129S1SvImJ_G0026156.1 mouse_genomes_project 2 93075564 93082657 + MGP_129S1SvImJ_P0056165 Harbi1 protein_coding protein_coding MGP_129S1SvImJ_T0054840.1 MGP_129S1SvImJ_G0025749.1 mouse_genomes_project 2 57926802 58058326 - Acvr1 protein_coding processed_transcript MGP_129S1SvImJ_T0054841.1 MGP_129S1SvImJ_G0025749.1 mouse_genomes_project 2 57987791 58070381 - MGP_129S1SvImJ_P0054841 Acvr1 protein_coding protein_coding MGP_129S1SvImJ_T0054842.1 MGP_129S1SvImJ_G0025749.1 mouse_genomes_project 2 57987793 58058326 - MGP_129S1SvImJ_P0054842 Acvr1 protein_coding protein_coding MGP_129S1SvImJ_T0054843.1 MGP_129S1SvImJ_G0025749.1 mouse_genomes_project 2 57987800 58110124 - MGP_129S1SvImJ_P0054843 Acvr1 protein_coding protein_coding MGP_129S1SvImJ_T0054844.1 MGP_129S1SvImJ_G0025749.1 mouse_genomes_project 2 57987800 58110122 - MGP_129S1SvImJ_P0054844 Acvr1 protein_coding protein_coding MGP_129S1SvImJ_T0054846.1 MGP_129S1SvImJ_G0025749.1 mouse_genomes_project 2 58019724 58080562 - MGP_129S1SvImJ_P0054846 Acvr1 protein_coding protein_coding MGP_129S1SvImJ_T0013654.1 MGP_129S1SvImJ_G0011743.1 mouse_genomes_project 2 88198158 88199620 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013821.1 MGP_129S1SvImJ_G0011910.1 mouse_genomes_project 2 151686268 151686577 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055470.1 MGP_129S1SvImJ_G0025871.1 mouse_genomes_project 2 77420217 77591858 - MGP_129S1SvImJ_P0055470 Ccdc141 protein_coding protein_coding MGP_129S1SvImJ_T0055471.1 MGP_129S1SvImJ_G0025871.1 mouse_genomes_project 2 77420310 77591840 - MGP_129S1SvImJ_P0055471 Ccdc141 protein_coding protein_coding MGP_129S1SvImJ_T0055472.1 MGP_129S1SvImJ_G0025871.1 mouse_genomes_project 2 77421862 77430239 - MGP_129S1SvImJ_P0055472 Ccdc141 protein_coding protein_coding MGP_129S1SvImJ_T0055473.1 MGP_129S1SvImJ_G0025871.1 mouse_genomes_project 2 77425372 77433017 - Ccdc141 protein_coding processed_transcript MGP_129S1SvImJ_T0055474.1 MGP_129S1SvImJ_G0025871.1 mouse_genomes_project 2 77433707 77440968 - Ccdc141 protein_coding retained_intron MGP_129S1SvImJ_T0055475.1 MGP_129S1SvImJ_G0025871.1 mouse_genomes_project 2 77440965 77455468 - Ccdc141 protein_coding retained_intron MGP_129S1SvImJ_T0055476.1 MGP_129S1SvImJ_G0025871.1 mouse_genomes_project 2 77440965 77456118 - MGP_129S1SvImJ_P0055476 Ccdc141 protein_coding protein_coding MGP_129S1SvImJ_T0055477.1 MGP_129S1SvImJ_G0025871.1 mouse_genomes_project 2 77456358 77591859 - Ccdc141 protein_coding retained_intron MGP_129S1SvImJ_T0055478.1 MGP_129S1SvImJ_G0025871.1 mouse_genomes_project 2 77487004 77591833 - Ccdc141 protein_coding retained_intron MGP_129S1SvImJ_T0055479.1 MGP_129S1SvImJ_G0025871.1 mouse_genomes_project 2 77548912 77591823 - MGP_129S1SvImJ_P0055479 Ccdc141 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055480.1 MGP_129S1SvImJ_G0025871.1 mouse_genomes_project 2 77583179 77591799 - MGP_129S1SvImJ_P0055480 Ccdc141 protein_coding protein_coding MGP_129S1SvImJ_T0001110.1 MGP_129S1SvImJ_G0001039.1 mouse_genomes_project 2 75700838 75701433 - TEC TEC MGP_129S1SvImJ_T0013784.1 MGP_129S1SvImJ_G0011873.1 mouse_genomes_project 2 136289562 136290533 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053742.1 MGP_129S1SvImJ_G0025553.1 mouse_genomes_project 2 28297343 28299418 - Zdhhc12 protein_coding processed_transcript MGP_129S1SvImJ_T0053743.1 MGP_129S1SvImJ_G0025553.1 mouse_genomes_project 2 28297343 28300047 - MGP_129S1SvImJ_P0053743 Zdhhc12 protein_coding protein_coding MGP_129S1SvImJ_T0053744.1 MGP_129S1SvImJ_G0025553.1 mouse_genomes_project 2 28297350 28300034 - MGP_129S1SvImJ_P0053744 Zdhhc12 protein_coding protein_coding MGP_129S1SvImJ_T0053745.1 MGP_129S1SvImJ_G0025553.1 mouse_genomes_project 2 28297730 28300015 - Zdhhc12 protein_coding retained_intron MGP_129S1SvImJ_T0013884.1 MGP_129S1SvImJ_G0011973.1 mouse_genomes_project 2 173341660 173342136 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001067.1 MGP_129S1SvImJ_G0000996.1 mouse_genomes_project 2 11522383 11526347 - TEC TEC MGP_129S1SvImJ_T0013783.1 MGP_129S1SvImJ_G0011872.1 mouse_genomes_project 2 136284676 136285281 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059678.1 MGP_129S1SvImJ_G0026986.1 mouse_genomes_project 2 186599977 186605001 - MGP_129S1SvImJ_P0059678 Hrh3 protein_coding protein_coding MGP_129S1SvImJ_T0059679.1 MGP_129S1SvImJ_G0026986.1 mouse_genomes_project 2 186600163 186604664 - MGP_129S1SvImJ_P0059679 Hrh3 protein_coding protein_coding MGP_129S1SvImJ_T0059680.1 MGP_129S1SvImJ_G0026986.1 mouse_genomes_project 2 186600390 186604664 - MGP_129S1SvImJ_P0059680 Hrh3 protein_coding protein_coding MGP_129S1SvImJ_T0059681.1 MGP_129S1SvImJ_G0026986.1 mouse_genomes_project 2 186600390 186604664 - MGP_129S1SvImJ_P0059681 Hrh3 protein_coding protein_coding MGP_129S1SvImJ_T0059682.1 MGP_129S1SvImJ_G0026986.1 mouse_genomes_project 2 186600791 186604687 - MGP_129S1SvImJ_P0059682 Hrh3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059683.1 MGP_129S1SvImJ_G0026986.1 mouse_genomes_project 2 186601008 186604664 - MGP_129S1SvImJ_P0059683 Hrh3 protein_coding protein_coding MGP_129S1SvImJ_T0059684.1 MGP_129S1SvImJ_G0026986.1 mouse_genomes_project 2 186601008 186604664 - MGP_129S1SvImJ_P0059684 Hrh3 protein_coding protein_coding MGP_129S1SvImJ_T0059685.1 MGP_129S1SvImJ_G0026986.1 mouse_genomes_project 2 186601496 186603848 - Hrh3 protein_coding retained_intron MGP_129S1SvImJ_T0053213.1 MGP_129S1SvImJ_G0025456.1 mouse_genomes_project 2 23474203 23475998 - MGP_129S1SvImJ_P0053213 Phpt1 protein_coding protein_coding MGP_129S1SvImJ_T0053214.1 MGP_129S1SvImJ_G0025456.1 mouse_genomes_project 2 23474275 23475652 - Phpt1 protein_coding processed_transcript MGP_129S1SvImJ_T0010475.1 MGP_129S1SvImJ_G0008591.1 mouse_genomes_project 2 133992676 133992735 - Gm23876 miRNA miRNA MGP_129S1SvImJ_T0055854.1 MGP_129S1SvImJ_G0026049.1 mouse_genomes_project 2 89484716 89485688 + MGP_129S1SvImJ_P0055854 Olfr1178 protein_coding protein_coding MGP_129S1SvImJ_T0059033.1 MGP_129S1SvImJ_G0026817.1 mouse_genomes_project 2 168348783 168388303 + MGP_129S1SvImJ_P0059033 Mybl2 protein_coding protein_coding MGP_129S1SvImJ_T0059034.1 MGP_129S1SvImJ_G0026817.1 mouse_genomes_project 2 168355807 168363199 + Mybl2 protein_coding processed_transcript MGP_129S1SvImJ_T0059035.1 MGP_129S1SvImJ_G0026817.1 mouse_genomes_project 2 168367810 168373859 + Mybl2 protein_coding retained_intron MGP_129S1SvImJ_T0059036.1 MGP_129S1SvImJ_G0026817.1 mouse_genomes_project 2 168375460 168383475 + MGP_129S1SvImJ_P0059036 Mybl2 protein_coding protein_coding MGP_129S1SvImJ_T0059037.1 MGP_129S1SvImJ_G0026817.1 mouse_genomes_project 2 168375868 168381579 + Mybl2 protein_coding retained_intron MGP_129S1SvImJ_T0010433.1 MGP_129S1SvImJ_G0008549.1 mouse_genomes_project 2 65170897 65171002 - Mir6337 miRNA miRNA MGP_129S1SvImJ_T0058181.1 MGP_129S1SvImJ_G0026628.1 mouse_genomes_project 2 155066431 155120659 - MGP_129S1SvImJ_P0058181 Acss1 protein_coding protein_coding MGP_129S1SvImJ_T0058182.1 MGP_129S1SvImJ_G0026628.1 mouse_genomes_project 2 155076897 155086413 - Acss1 protein_coding processed_transcript MGP_129S1SvImJ_T0058183.1 MGP_129S1SvImJ_G0026628.1 mouse_genomes_project 2 155076977 155086411 - Acss1 protein_coding processed_transcript MGP_129S1SvImJ_T0058184.1 MGP_129S1SvImJ_G0026628.1 mouse_genomes_project 2 155086277 155120901 - Acss1 protein_coding processed_transcript MGP_129S1SvImJ_T0058185.1 MGP_129S1SvImJ_G0026628.1 mouse_genomes_project 2 155112005 155120615 - Acss1 protein_coding retained_intron MGP_129S1SvImJ_T0013657.1 MGP_129S1SvImJ_G0011746.1 mouse_genomes_project 2 88336129 88336535 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007227.1 MGP_129S1SvImJ_G0005930.1 mouse_genomes_project 2 71895726 71903315 + Gm13647 lincRNA lincRNA MGP_129S1SvImJ_T0004196.1 MGP_129S1SvImJ_G0003708.1 mouse_genomes_project 2 178494570 178507830 + Gm14273 antisense antisense MGP_129S1SvImJ_T0058060.1 MGP_129S1SvImJ_G0026591.1 mouse_genomes_project 2 148709143 148881563 + MGP_129S1SvImJ_P0058060 Dtd1 protein_coding protein_coding MGP_129S1SvImJ_T0058061.1 MGP_129S1SvImJ_G0026591.1 mouse_genomes_project 2 148727299 148881245 + Dtd1 protein_coding processed_transcript MGP_129S1SvImJ_T0058062.1 MGP_129S1SvImJ_G0026591.1 mouse_genomes_project 2 148785105 148858732 + Dtd1 protein_coding processed_transcript MGP_129S1SvImJ_T0058063.1 MGP_129S1SvImJ_G0026591.1 mouse_genomes_project 2 148845030 148881299 + Dtd1 protein_coding processed_transcript MGP_129S1SvImJ_T0058064.1 MGP_129S1SvImJ_G0026591.1 mouse_genomes_project 2 148850028 148881080 + Dtd1 protein_coding processed_transcript MGP_129S1SvImJ_T0052721.1 MGP_129S1SvImJ_G0025371.1 mouse_genomes_project 2 15692830 15706759 - MGP_129S1SvImJ_P0052721 A930004D18Rik protein_coding protein_coding MGP_129S1SvImJ_T0052722.1 MGP_129S1SvImJ_G0025371.1 mouse_genomes_project 2 15695563 15696398 - A930004D18Rik protein_coding processed_transcript MGP_129S1SvImJ_T0052723.1 MGP_129S1SvImJ_G0025371.1 mouse_genomes_project 2 15695611 15696509 - A930004D18Rik protein_coding processed_transcript MGP_129S1SvImJ_T0007394.1 MGP_129S1SvImJ_G0006067.1 mouse_genomes_project 2 171592196 171605181 - Platr29 lincRNA lincRNA MGP_129S1SvImJ_T0057666.1 MGP_129S1SvImJ_G0026503.1 mouse_genomes_project 2 133865207 133866641 + MGP_129S1SvImJ_P0057666 Tmem239 protein_coding protein_coding MGP_129S1SvImJ_T0053548.1 MGP_129S1SvImJ_G0025524.1 mouse_genomes_project 2 26563302 26563721 + MGP_129S1SvImJ_P0053548 protein_coding protein_coding MGP_129S1SvImJ_T0010392.1 MGP_129S1SvImJ_G0008508.1 mouse_genomes_project 2 15728479 15728537 + Mir7655 miRNA miRNA MGP_129S1SvImJ_T0057070.1 MGP_129S1SvImJ_G0026371.1 mouse_genomes_project 2 123476961 123489601 + MGP_129S1SvImJ_P0057070 Haus2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057071.1 MGP_129S1SvImJ_G0026371.1 mouse_genomes_project 2 123477008 123491201 + MGP_129S1SvImJ_P0057071 Haus2 protein_coding protein_coding MGP_129S1SvImJ_T0055739.1 MGP_129S1SvImJ_G0025947.1 mouse_genomes_project 2 86759618 86761009 + MGP_129S1SvImJ_P0055739 Olfr1029 protein_coding protein_coding MGP_129S1SvImJ_T0007158.1 MGP_129S1SvImJ_G0005875.1 mouse_genomes_project 2 20485064 20494006 + 1700092C17Rik lincRNA lincRNA MGP_129S1SvImJ_T0007159.1 MGP_129S1SvImJ_G0005875.1 mouse_genomes_project 2 20493704 20493974 + 1700092C17Rik lincRNA lincRNA MGP_129S1SvImJ_T0052442.1 MGP_129S1SvImJ_G0025328.1 mouse_genomes_project 2 3092381 3206324 + MGP_129S1SvImJ_P0052442 Upf2 protein_coding protein_coding MGP_129S1SvImJ_T0052443.1 MGP_129S1SvImJ_G0025328.1 mouse_genomes_project 2 3092424 3206326 + MGP_129S1SvImJ_P0052443 Upf2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0052444.1 MGP_129S1SvImJ_G0025328.1 mouse_genomes_project 2 3171664 3206319 + MGP_129S1SvImJ_P0052444 Upf2 protein_coding protein_coding MGP_129S1SvImJ_T0052445.1 MGP_129S1SvImJ_G0025328.1 mouse_genomes_project 2 3200088 3205123 + Upf2 protein_coding processed_transcript MGP_129S1SvImJ_T0100927.1 MGP_129S1SvImJ_G0038994.1 mouse_genomes_project 2 30655541 30655626 + Gm25632 snoRNA snoRNA MGP_129S1SvImJ_T0053297.1 MGP_129S1SvImJ_G0025478.1 mouse_genomes_project 2 24151923 24159997 - MGP_129S1SvImJ_P0053297 Lhx3 protein_coding protein_coding MGP_129S1SvImJ_T0053298.1 MGP_129S1SvImJ_G0025478.1 mouse_genomes_project 2 24151927 24154578 - Lhx3 protein_coding retained_intron MGP_129S1SvImJ_T0053299.1 MGP_129S1SvImJ_G0025478.1 mouse_genomes_project 2 24151927 24158283 - MGP_129S1SvImJ_P0053299 Lhx3 protein_coding protein_coding MGP_129S1SvImJ_T0053300.1 MGP_129S1SvImJ_G0025478.1 mouse_genomes_project 2 24154187 24155153 - Lhx3 protein_coding retained_intron MGP_129S1SvImJ_T0056785.1 MGP_129S1SvImJ_G0026315.1 mouse_genomes_project 2 121161499 121164629 - MGP_129S1SvImJ_P0056785 Srp14 protein_coding protein_coding MGP_129S1SvImJ_T0056786.1 MGP_129S1SvImJ_G0026315.1 mouse_genomes_project 2 121161500 121163758 - Srp14 protein_coding processed_transcript MGP_129S1SvImJ_T0056787.1 MGP_129S1SvImJ_G0026315.1 mouse_genomes_project 2 121161510 121164566 - Srp14 protein_coding processed_transcript MGP_129S1SvImJ_T0056788.1 MGP_129S1SvImJ_G0026315.1 mouse_genomes_project 2 121163439 121164553 - MGP_129S1SvImJ_P0056788 Srp14 protein_coding protein_coding MGP_129S1SvImJ_T0013750.1 MGP_129S1SvImJ_G0011839.1 mouse_genomes_project 2 122492920 122493306 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058997.1 MGP_129S1SvImJ_G0026810.1 mouse_genomes_project 2 166153500 166321775 - MGP_129S1SvImJ_P0058997 Chd6 protein_coding protein_coding MGP_129S1SvImJ_T0058998.1 MGP_129S1SvImJ_G0026810.1 mouse_genomes_project 2 166166687 166168265 - Chd6 protein_coding processed_transcript MGP_129S1SvImJ_T0058999.1 MGP_129S1SvImJ_G0026810.1 mouse_genomes_project 2 166166807 166171540 - Chd6 protein_coding processed_transcript MGP_129S1SvImJ_T0059000.1 MGP_129S1SvImJ_G0026810.1 mouse_genomes_project 2 166187923 166192488 - Chd6 protein_coding retained_intron MGP_129S1SvImJ_T0059001.1 MGP_129S1SvImJ_G0026810.1 mouse_genomes_project 2 166190625 166321775 - MGP_129S1SvImJ_P0059001 Chd6 protein_coding protein_coding MGP_129S1SvImJ_T0059002.1 MGP_129S1SvImJ_G0026810.1 mouse_genomes_project 2 166200541 166218363 - Chd6 protein_coding retained_intron MGP_129S1SvImJ_T0059003.1 MGP_129S1SvImJ_G0026810.1 mouse_genomes_project 2 166217903 166321828 - Chd6 protein_coding retained_intron MGP_129S1SvImJ_T0059004.1 MGP_129S1SvImJ_G0026810.1 mouse_genomes_project 2 166223961 166228119 - Chd6 protein_coding processed_transcript MGP_129S1SvImJ_T0059005.1 MGP_129S1SvImJ_G0026810.1 mouse_genomes_project 2 166235684 166239335 - Chd6 protein_coding processed_transcript MGP_129S1SvImJ_T0059006.1 MGP_129S1SvImJ_G0026810.1 mouse_genomes_project 2 166239625 166263353 - MGP_129S1SvImJ_P0059006 Chd6 protein_coding protein_coding MGP_129S1SvImJ_T0059007.1 MGP_129S1SvImJ_G0026810.1 mouse_genomes_project 2 166244815 166321757 - Chd6 protein_coding retained_intron MGP_129S1SvImJ_T0013606.1 MGP_129S1SvImJ_G0011695.1 mouse_genomes_project 2 72836134 72837291 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100933.1 MGP_129S1SvImJ_G0039000.1 mouse_genomes_project 2 39121499 39121625 + Gm24467 snoRNA snoRNA MGP_129S1SvImJ_T0052884.1 MGP_129S1SvImJ_G0025398.1 mouse_genomes_project 2 20957189 21020330 + MGP_129S1SvImJ_P0052884 4931423N10Rik protein_coding protein_coding MGP_129S1SvImJ_T0052885.1 MGP_129S1SvImJ_G0025398.1 mouse_genomes_project 2 20957210 21017833 + MGP_129S1SvImJ_P0052885 4931423N10Rik protein_coding protein_coding MGP_129S1SvImJ_T0054965.1 MGP_129S1SvImJ_G0025767.1 mouse_genomes_project 2 61479003 61480608 + Tbr1 protein_coding processed_transcript MGP_129S1SvImJ_T0054966.1 MGP_129S1SvImJ_G0025767.1 mouse_genomes_project 2 61480502 61490153 + MGP_129S1SvImJ_P0054966 Tbr1 protein_coding protein_coding MGP_129S1SvImJ_T0054967.1 MGP_129S1SvImJ_G0025767.1 mouse_genomes_project 2 61482311 61488570 + MGP_129S1SvImJ_P0054967 Tbr1 protein_coding protein_coding MGP_129S1SvImJ_T0054968.1 MGP_129S1SvImJ_G0025767.1 mouse_genomes_project 2 61482322 61487840 + Tbr1 protein_coding processed_transcript MGP_129S1SvImJ_T0102449.1 MGP_129S1SvImJ_G0040283.1 mouse_genomes_project 2 180109339 180167955 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0058964.1 MGP_129S1SvImJ_G0026803.1 mouse_genomes_project 2 165537171 165540538 - MGP_129S1SvImJ_P0058964 Mafb protein_coding protein_coding MGP_129S1SvImJ_T0013465.1 MGP_129S1SvImJ_G0011554.1 mouse_genomes_project 2 19264008 19264629 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007187.1 MGP_129S1SvImJ_G0005896.1 mouse_genomes_project 2 32656035 32670083 - Gm38389 lincRNA lincRNA MGP_129S1SvImJ_T0004188.1 MGP_129S1SvImJ_G0003700.1 mouse_genomes_project 2 172913190 172914414 + Gm14291 antisense antisense MGP_129S1SvImJ_T0058066.1 MGP_129S1SvImJ_G0026593.1 mouse_genomes_project 2 149283194 149770183 + MGP_129S1SvImJ_P0058066 Slc24a3 protein_coding protein_coding MGP_129S1SvImJ_T0058067.1 MGP_129S1SvImJ_G0026593.1 mouse_genomes_project 2 149283359 149636993 + Slc24a3 protein_coding processed_transcript MGP_129S1SvImJ_T0058068.1 MGP_129S1SvImJ_G0026593.1 mouse_genomes_project 2 149352563 149770183 + Slc24a3 protein_coding processed_transcript MGP_129S1SvImJ_T0058069.1 MGP_129S1SvImJ_G0026593.1 mouse_genomes_project 2 149352574 149768369 + MGP_129S1SvImJ_P0058069 Slc24a3 protein_coding protein_coding MGP_129S1SvImJ_T0058070.1 MGP_129S1SvImJ_G0026593.1 mouse_genomes_project 2 149730040 149737388 + Slc24a3 protein_coding processed_transcript MGP_129S1SvImJ_T0003965.1 MGP_129S1SvImJ_G0003540.1 mouse_genomes_project 2 30034540 30047286 - Gm13427 antisense antisense MGP_129S1SvImJ_T0052975.1 MGP_129S1SvImJ_G0025416.1 mouse_genomes_project 2 22818402 22819383 - MGP_129S1SvImJ_P0052975 protein_coding protein_coding MGP_129S1SvImJ_T0052976.1 MGP_129S1SvImJ_G0025416.1 mouse_genomes_project 2 22818779 22819274 - MGP_129S1SvImJ_P0052976 protein_coding protein_coding MGP_129S1SvImJ_T0004108.1 MGP_129S1SvImJ_G0003640.1 mouse_genomes_project 2 135200306 135269211 - Gm14280 antisense antisense MGP_129S1SvImJ_T0007308.1 MGP_129S1SvImJ_G0005995.1 mouse_genomes_project 2 118635291 118636526 - 2700033N17Rik lincRNA lincRNA MGP_129S1SvImJ_T0053486.1 MGP_129S1SvImJ_G0025512.1 mouse_genomes_project 2 25164135 25208399 - Sardh protein_coding processed_transcript MGP_129S1SvImJ_T0053487.1 MGP_129S1SvImJ_G0025512.1 mouse_genomes_project 2 25164135 25224371 - MGP_129S1SvImJ_P0053487 Sardh protein_coding protein_coding MGP_129S1SvImJ_T0053488.1 MGP_129S1SvImJ_G0025512.1 mouse_genomes_project 2 25164939 25168009 - Sardh protein_coding retained_intron MGP_129S1SvImJ_T0053489.1 MGP_129S1SvImJ_G0025512.1 mouse_genomes_project 2 25165124 25185668 - Sardh protein_coding processed_transcript MGP_129S1SvImJ_T0053490.1 MGP_129S1SvImJ_G0025512.1 mouse_genomes_project 2 25172431 25194689 - Sardh protein_coding retained_intron MGP_129S1SvImJ_T0053491.1 MGP_129S1SvImJ_G0025512.1 mouse_genomes_project 2 25186773 25191350 - Sardh protein_coding processed_transcript MGP_129S1SvImJ_T0053492.1 MGP_129S1SvImJ_G0025512.1 mouse_genomes_project 2 25186809 25200906 - Sardh protein_coding retained_intron MGP_129S1SvImJ_T0053493.1 MGP_129S1SvImJ_G0025512.1 mouse_genomes_project 2 25218671 25223953 - MGP_129S1SvImJ_P0053493 Sardh protein_coding protein_coding MGP_129S1SvImJ_T0053494.1 MGP_129S1SvImJ_G0025512.1 mouse_genomes_project 2 25218689 25225442 - MGP_129S1SvImJ_P0053494 Sardh protein_coding protein_coding MGP_129S1SvImJ_T0053495.1 MGP_129S1SvImJ_G0025512.1 mouse_genomes_project 2 25221488 25224519 - MGP_129S1SvImJ_P0053495 Sardh protein_coding protein_coding MGP_129S1SvImJ_T0004156.1 MGP_129S1SvImJ_G0003676.1 mouse_genomes_project 2 160675397 160676561 + Gm16098 antisense antisense MGP_129S1SvImJ_T0059141.1 MGP_129S1SvImJ_G0026855.1 mouse_genomes_project 2 169932859 169937521 + MGP_129S1SvImJ_P0059141 Dbndd2 protein_coding protein_coding MGP_129S1SvImJ_T0059142.1 MGP_129S1SvImJ_G0026855.1 mouse_genomes_project 2 169933208 169938029 + MGP_129S1SvImJ_P0059142 Dbndd2 protein_coding protein_coding MGP_129S1SvImJ_T0059143.1 MGP_129S1SvImJ_G0026855.1 mouse_genomes_project 2 169933208 169937521 + MGP_129S1SvImJ_P0059143 Dbndd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059144.1 MGP_129S1SvImJ_G0026855.1 mouse_genomes_project 2 169933234 169936970 + MGP_129S1SvImJ_P0059144 Dbndd2 protein_coding protein_coding MGP_129S1SvImJ_T0059145.1 MGP_129S1SvImJ_G0026855.1 mouse_genomes_project 2 169933630 169940090 + MGP_129S1SvImJ_P0059145 Dbndd2 protein_coding protein_coding MGP_129S1SvImJ_T0059146.1 MGP_129S1SvImJ_G0026855.1 mouse_genomes_project 2 169934574 169937521 + MGP_129S1SvImJ_P0059146 Dbndd2 protein_coding protein_coding MGP_129S1SvImJ_T0100917.1 MGP_129S1SvImJ_G0038984.1 mouse_genomes_project 2 19627213 19627336 - Gm24886 snoRNA snoRNA MGP_129S1SvImJ_T0013813.1 MGP_129S1SvImJ_G0011902.1 mouse_genomes_project 2 149628234 149628698 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055123.1 MGP_129S1SvImJ_G0025797.1 mouse_genomes_project 2 69175013 69296643 - MGP_129S1SvImJ_P0055123 Abcb11 protein_coding protein_coding MGP_129S1SvImJ_T0055124.1 MGP_129S1SvImJ_G0025797.1 mouse_genomes_project 2 69175020 69296645 - MGP_129S1SvImJ_P0055124 Abcb11 protein_coding protein_coding MGP_129S1SvImJ_T0055125.1 MGP_129S1SvImJ_G0025797.1 mouse_genomes_project 2 69175020 69296629 - MGP_129S1SvImJ_P0055125 Abcb11 protein_coding protein_coding MGP_129S1SvImJ_T0055126.1 MGP_129S1SvImJ_G0025797.1 mouse_genomes_project 2 69175041 69175810 - Abcb11 protein_coding processed_transcript MGP_129S1SvImJ_T0054757.1 MGP_129S1SvImJ_G0025731.1 mouse_genomes_project 2 51350289 51371109 + MGP_129S1SvImJ_P0054757 Tnfaip6 protein_coding protein_coding MGP_129S1SvImJ_T0059246.1 MGP_129S1SvImJ_G0026885.1 mouse_genomes_project 2 170523726 170558028 - MGP_129S1SvImJ_P0059246 Ncoa5 protein_coding protein_coding MGP_129S1SvImJ_T0059247.1 MGP_129S1SvImJ_G0026885.1 mouse_genomes_project 2 170523729 170557978 - MGP_129S1SvImJ_P0059247 Ncoa5 protein_coding protein_coding MGP_129S1SvImJ_T0059248.1 MGP_129S1SvImJ_G0026885.1 mouse_genomes_project 2 170523732 170557949 - MGP_129S1SvImJ_P0059248 Ncoa5 protein_coding protein_coding MGP_129S1SvImJ_T0059249.1 MGP_129S1SvImJ_G0026885.1 mouse_genomes_project 2 170526050 170528033 - Ncoa5 protein_coding retained_intron MGP_129S1SvImJ_T0059250.1 MGP_129S1SvImJ_G0026885.1 mouse_genomes_project 2 170533476 170557964 - Ncoa5 protein_coding retained_intron MGP_129S1SvImJ_T0059251.1 MGP_129S1SvImJ_G0026885.1 mouse_genomes_project 2 170536390 170557990 - MGP_129S1SvImJ_P0059251 Ncoa5 protein_coding protein_coding MGP_129S1SvImJ_T0059252.1 MGP_129S1SvImJ_G0026885.1 mouse_genomes_project 2 170546058 170546600 - Ncoa5 protein_coding processed_transcript MGP_129S1SvImJ_T0059253.1 MGP_129S1SvImJ_G0026885.1 mouse_genomes_project 2 170546328 170557948 - Ncoa5 protein_coding retained_intron MGP_129S1SvImJ_T0055789.1 MGP_129S1SvImJ_G0025995.1 mouse_genomes_project 2 88061451 88062390 - MGP_129S1SvImJ_P0055789 Olfr1107 protein_coding protein_coding MGP_129S1SvImJ_T0007298.1 MGP_129S1SvImJ_G0005987.1 mouse_genomes_project 2 113426632 113435991 - lincRNA lincRNA MGP_129S1SvImJ_T0056511.1 MGP_129S1SvImJ_G0026221.1 mouse_genomes_project 2 106836680 106859545 - MGP_129S1SvImJ_P0056511 Depdc7 protein_coding protein_coding MGP_129S1SvImJ_T0056512.1 MGP_129S1SvImJ_G0026221.1 mouse_genomes_project 2 106837481 106838056 - Depdc7 protein_coding retained_intron MGP_129S1SvImJ_T0100966.1 MGP_129S1SvImJ_G0039033.1 mouse_genomes_project 2 132135808 132136190 + Gm23172 snoRNA snoRNA MGP_129S1SvImJ_T0058447.1 MGP_129S1SvImJ_G0026706.1 mouse_genomes_project 2 158850612 158858621 + MGP_129S1SvImJ_P0058447 Bpifa3 protein_coding protein_coding MGP_129S1SvImJ_T0058448.1 MGP_129S1SvImJ_G0026706.1 mouse_genomes_project 2 158850612 158858621 + MGP_129S1SvImJ_P0058448 Bpifa3 protein_coding protein_coding MGP_129S1SvImJ_T0058449.1 MGP_129S1SvImJ_G0026706.1 mouse_genomes_project 2 158855735 158857885 + MGP_129S1SvImJ_P0058449 Bpifa3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056241.1 MGP_129S1SvImJ_G0026167.1 mouse_genomes_project 2 93814339 93823394 - MGP_129S1SvImJ_P0056241 Mapk8ip1 protein_coding protein_coding MGP_129S1SvImJ_T0056242.1 MGP_129S1SvImJ_G0026167.1 mouse_genomes_project 2 93814343 93831908 - MGP_129S1SvImJ_P0056242 Mapk8ip1 protein_coding protein_coding MGP_129S1SvImJ_T0056243.1 MGP_129S1SvImJ_G0026167.1 mouse_genomes_project 2 93820564 93823395 - Mapk8ip1 protein_coding processed_transcript MGP_129S1SvImJ_T0007250.1 MGP_129S1SvImJ_G0005948.1 mouse_genomes_project 2 75819257 75825082 - Gm13660 lincRNA lincRNA MGP_129S1SvImJ_T0004105.1 MGP_129S1SvImJ_G0003637.1 mouse_genomes_project 2 132968272 132969294 - Gm14041 antisense antisense MGP_129S1SvImJ_T0100913.1 MGP_129S1SvImJ_G0038980.1 mouse_genomes_project 2 7428293 7428421 - Gm23608 snoRNA snoRNA MGP_129S1SvImJ_T0056147.1 MGP_129S1SvImJ_G0026154.1 mouse_genomes_project 2 92999443 93028174 + MGP_129S1SvImJ_P0056147 Arhgap1 protein_coding protein_coding MGP_129S1SvImJ_T0056148.1 MGP_129S1SvImJ_G0026154.1 mouse_genomes_project 2 93001081 93004115 + Arhgap1 protein_coding processed_transcript MGP_129S1SvImJ_T0056149.1 MGP_129S1SvImJ_G0026154.1 mouse_genomes_project 2 93001081 93004117 + Arhgap1 protein_coding processed_transcript MGP_129S1SvImJ_T0056150.1 MGP_129S1SvImJ_G0026154.1 mouse_genomes_project 2 93001330 93017955 + Arhgap1 protein_coding processed_transcript MGP_129S1SvImJ_T0056151.1 MGP_129S1SvImJ_G0026154.1 mouse_genomes_project 2 93002791 93028150 + MGP_129S1SvImJ_P0056151 Arhgap1 protein_coding protein_coding MGP_129S1SvImJ_T0056152.1 MGP_129S1SvImJ_G0026154.1 mouse_genomes_project 2 93018142 93020988 + Arhgap1 protein_coding processed_transcript MGP_129S1SvImJ_T0056153.1 MGP_129S1SvImJ_G0026154.1 mouse_genomes_project 2 93019557 93020674 + Arhgap1 protein_coding processed_transcript MGP_129S1SvImJ_T0056091.1 MGP_129S1SvImJ_G0026146.1 mouse_genomes_project 2 92522529 92550836 - Ddb2 protein_coding processed_transcript MGP_129S1SvImJ_T0056092.1 MGP_129S1SvImJ_G0026146.1 mouse_genomes_project 2 92522545 92554277 - Ddb2 protein_coding processed_transcript MGP_129S1SvImJ_T0056093.1 MGP_129S1SvImJ_G0026146.1 mouse_genomes_project 2 92522560 92554255 - MGP_129S1SvImJ_P0056093 Ddb2 protein_coding protein_coding MGP_129S1SvImJ_T0056094.1 MGP_129S1SvImJ_G0026146.1 mouse_genomes_project 2 92522578 92554330 - Ddb2 protein_coding processed_transcript MGP_129S1SvImJ_T0056095.1 MGP_129S1SvImJ_G0026146.1 mouse_genomes_project 2 92522813 92554352 - MGP_129S1SvImJ_P0056095 Ddb2 protein_coding protein_coding MGP_129S1SvImJ_T0055876.1 MGP_129S1SvImJ_G0026070.1 mouse_genomes_project 2 90067961 90068888 - MGP_129S1SvImJ_P0055876 Olfr1208 protein_coding protein_coding MGP_129S1SvImJ_T0013862.1 MGP_129S1SvImJ_G0011951.1 mouse_genomes_project 2 163544591 163544794 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003981.1 MGP_129S1SvImJ_G0003553.1 mouse_genomes_project 2 34488778 34492974 + 9030204H09Rik antisense antisense MGP_129S1SvImJ_T0010418.1 MGP_129S1SvImJ_G0008534.1 mouse_genomes_project 2 31153922 31153987 + miRNA miRNA MGP_129S1SvImJ_T0056715.1 MGP_129S1SvImJ_G0026299.1 mouse_genomes_project 2 116311066 116326183 - MGP_129S1SvImJ_P0056715 Arhgap11a protein_coding protein_coding MGP_129S1SvImJ_T0056716.1 MGP_129S1SvImJ_G0026299.1 mouse_genomes_project 2 116311354 116326391 - MGP_129S1SvImJ_P0056716 Arhgap11a protein_coding protein_coding MGP_129S1SvImJ_T0055786.1 MGP_129S1SvImJ_G0025992.1 mouse_genomes_project 2 88005048 88005981 - MGP_129S1SvImJ_P0055786 Olfr1104 protein_coding protein_coding MGP_129S1SvImJ_T0055648.1 MGP_129S1SvImJ_G0025905.1 mouse_genomes_project 2 85360017 85370358 + MGP_129S1SvImJ_P0055648 Med19 protein_coding protein_coding MGP_129S1SvImJ_T0055649.1 MGP_129S1SvImJ_G0025905.1 mouse_genomes_project 2 85367775 85369642 + Med19 protein_coding processed_transcript MGP_129S1SvImJ_T0011528.1 MGP_129S1SvImJ_G0009644.1 mouse_genomes_project 2 107273008 107273130 - Gm27636 misc_RNA misc_RNA MGP_129S1SvImJ_T0017892.1 MGP_129S1SvImJ_G0015465.1 mouse_genomes_project 2 128288713 128298360 - Gm14004 processed_transcript processed_transcript MGP_129S1SvImJ_T0052335.1 MGP_129S1SvImJ_G0025310.1 mouse_genomes_project 2 466990 494615 - MGP_129S1SvImJ_P0052335 protein_coding protein_coding MGP_129S1SvImJ_T0052336.1 MGP_129S1SvImJ_G0025310.1 mouse_genomes_project 2 467116 468303 - protein_coding retained_intron MGP_129S1SvImJ_T0052337.1 MGP_129S1SvImJ_G0025310.1 mouse_genomes_project 2 469098 470181 - protein_coding retained_intron MGP_129S1SvImJ_T0052338.1 MGP_129S1SvImJ_G0025310.1 mouse_genomes_project 2 475474 479899 - protein_coding retained_intron MGP_129S1SvImJ_T0052339.1 MGP_129S1SvImJ_G0025310.1 mouse_genomes_project 2 482299 484801 - protein_coding retained_intron MGP_129S1SvImJ_T0052340.1 MGP_129S1SvImJ_G0025310.1 mouse_genomes_project 2 486327 494558 - MGP_129S1SvImJ_P0052340 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052341.1 MGP_129S1SvImJ_G0025310.1 mouse_genomes_project 2 488209 494591 - MGP_129S1SvImJ_P0052341 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052342.1 MGP_129S1SvImJ_G0025310.1 mouse_genomes_project 2 492688 494544 - protein_coding retained_intron MGP_129S1SvImJ_T0055755.1 MGP_129S1SvImJ_G0025963.1 mouse_genomes_project 2 87102661 87144718 - MGP_129S1SvImJ_P0055755 Olfr1051 protein_coding protein_coding MGP_129S1SvImJ_T0055175.1 MGP_129S1SvImJ_G0025809.1 mouse_genomes_project 2 69899841 70032868 + MGP_129S1SvImJ_P0055175 Ubr3 protein_coding protein_coding MGP_129S1SvImJ_T0055176.1 MGP_129S1SvImJ_G0025809.1 mouse_genomes_project 2 69899841 70032868 + MGP_129S1SvImJ_P0055176 Ubr3 protein_coding protein_coding MGP_129S1SvImJ_T0055177.1 MGP_129S1SvImJ_G0025809.1 mouse_genomes_project 2 69899898 69945894 + MGP_129S1SvImJ_P0055177 Ubr3 protein_coding protein_coding MGP_129S1SvImJ_T0055178.1 MGP_129S1SvImJ_G0025809.1 mouse_genomes_project 2 69942497 69952536 + Ubr3 protein_coding processed_transcript MGP_129S1SvImJ_T0055179.1 MGP_129S1SvImJ_G0025809.1 mouse_genomes_project 2 69997880 70018197 + MGP_129S1SvImJ_P0055179 Ubr3 protein_coding protein_coding MGP_129S1SvImJ_T0055180.1 MGP_129S1SvImJ_G0025809.1 mouse_genomes_project 2 70002806 70031400 + Ubr3 protein_coding processed_transcript MGP_129S1SvImJ_T0055181.1 MGP_129S1SvImJ_G0025809.1 mouse_genomes_project 2 70009640 70018335 + Ubr3 protein_coding processed_transcript MGP_129S1SvImJ_T0055182.1 MGP_129S1SvImJ_G0025809.1 mouse_genomes_project 2 70018015 70025320 + Ubr3 protein_coding processed_transcript MGP_129S1SvImJ_T0055183.1 MGP_129S1SvImJ_G0025809.1 mouse_genomes_project 2 70028982 70030041 + Ubr3 protein_coding processed_transcript MGP_129S1SvImJ_T0055184.1 MGP_129S1SvImJ_G0025809.1 mouse_genomes_project 2 70029366 70031075 + Ubr3 protein_coding processed_transcript MGP_129S1SvImJ_T0059237.1 MGP_129S1SvImJ_G0026884.1 mouse_genomes_project 2 170482416 170484439 + MGP_129S1SvImJ_P0059237 Slc12a5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059238.1 MGP_129S1SvImJ_G0026884.1 mouse_genomes_project 2 170482430 170496201 + Slc12a5 protein_coding processed_transcript MGP_129S1SvImJ_T0059239.1 MGP_129S1SvImJ_G0026884.1 mouse_genomes_project 2 170482438 170520949 + MGP_129S1SvImJ_P0059239 Slc12a5 protein_coding protein_coding MGP_129S1SvImJ_T0059240.1 MGP_129S1SvImJ_G0026884.1 mouse_genomes_project 2 170482460 170523092 + MGP_129S1SvImJ_P0059240 Slc12a5 protein_coding protein_coding MGP_129S1SvImJ_T0059241.1 MGP_129S1SvImJ_G0026884.1 mouse_genomes_project 2 170489645 170523101 + MGP_129S1SvImJ_P0059241 Slc12a5 protein_coding protein_coding MGP_129S1SvImJ_T0059242.1 MGP_129S1SvImJ_G0026884.1 mouse_genomes_project 2 170489900 170523097 + MGP_129S1SvImJ_P0059242 Slc12a5 protein_coding protein_coding MGP_129S1SvImJ_T0059243.1 MGP_129S1SvImJ_G0026884.1 mouse_genomes_project 2 170489942 170513539 + MGP_129S1SvImJ_P0059243 Slc12a5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059244.1 MGP_129S1SvImJ_G0026884.1 mouse_genomes_project 2 170505555 170509909 + Slc12a5 protein_coding retained_intron MGP_129S1SvImJ_T0059245.1 MGP_129S1SvImJ_G0026884.1 mouse_genomes_project 2 170519970 170523092 + Slc12a5 protein_coding retained_intron MGP_129S1SvImJ_T0013450.1 MGP_129S1SvImJ_G0011539.1 mouse_genomes_project 2 14599065 14600076 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057858.1 MGP_129S1SvImJ_G0026543.1 mouse_genomes_project 2 136123517 136136467 - Gpcpd1 protein_coding retained_intron MGP_129S1SvImJ_T0057859.1 MGP_129S1SvImJ_G0026543.1 mouse_genomes_project 2 136123517 136180123 - MGP_129S1SvImJ_P0057859 Gpcpd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057860.1 MGP_129S1SvImJ_G0026543.1 mouse_genomes_project 2 136123517 136180110 - MGP_129S1SvImJ_P0057860 Gpcpd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057861.1 MGP_129S1SvImJ_G0026543.1 mouse_genomes_project 2 136123517 136180053 - MGP_129S1SvImJ_P0057861 Gpcpd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057862.1 MGP_129S1SvImJ_G0026543.1 mouse_genomes_project 2 136124988 136180122 - MGP_129S1SvImJ_P0057862 Gpcpd1 protein_coding protein_coding MGP_129S1SvImJ_T0057863.1 MGP_129S1SvImJ_G0026543.1 mouse_genomes_project 2 136128587 136132563 - MGP_129S1SvImJ_P0057863 Gpcpd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057864.1 MGP_129S1SvImJ_G0026543.1 mouse_genomes_project 2 136144893 136180062 - MGP_129S1SvImJ_P0057864 Gpcpd1 protein_coding protein_coding MGP_129S1SvImJ_T0057865.1 MGP_129S1SvImJ_G0026543.1 mouse_genomes_project 2 136149055 136189605 - MGP_129S1SvImJ_P0057865 Gpcpd1 protein_coding protein_coding MGP_129S1SvImJ_T0057866.1 MGP_129S1SvImJ_G0026543.1 mouse_genomes_project 2 136149167 136180092 - Gpcpd1 protein_coding processed_transcript MGP_129S1SvImJ_T0057867.1 MGP_129S1SvImJ_G0026543.1 mouse_genomes_project 2 136159447 136180121 - Gpcpd1 protein_coding processed_transcript MGP_129S1SvImJ_T0057688.1 MGP_129S1SvImJ_G0026508.1 mouse_genomes_project 2 134041220 134042099 + MGP_129S1SvImJ_P0057688 Oxt protein_coding protein_coding MGP_129S1SvImJ_T0057802.1 MGP_129S1SvImJ_G0026531.1 mouse_genomes_project 2 135031510 135060170 + MGP_129S1SvImJ_P0057802 Smox protein_coding protein_coding MGP_129S1SvImJ_T0057803.1 MGP_129S1SvImJ_G0026531.1 mouse_genomes_project 2 135031778 135065140 + MGP_129S1SvImJ_P0057803 Smox protein_coding protein_coding MGP_129S1SvImJ_T0057804.1 MGP_129S1SvImJ_G0026531.1 mouse_genomes_project 2 135031937 135060209 + MGP_129S1SvImJ_P0057804 Smox protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057805.1 MGP_129S1SvImJ_G0026531.1 mouse_genomes_project 2 135031957 135065129 + Smox protein_coding retained_intron MGP_129S1SvImJ_T0057806.1 MGP_129S1SvImJ_G0026531.1 mouse_genomes_project 2 135031957 135065129 + MGP_129S1SvImJ_P0057806 Smox protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057807.1 MGP_129S1SvImJ_G0026531.1 mouse_genomes_project 2 135031957 135065129 + MGP_129S1SvImJ_P0057807 Smox protein_coding protein_coding MGP_129S1SvImJ_T0057808.1 MGP_129S1SvImJ_G0026531.1 mouse_genomes_project 2 135031957 135065129 + MGP_129S1SvImJ_P0057808 Smox protein_coding protein_coding MGP_129S1SvImJ_T0057809.1 MGP_129S1SvImJ_G0026531.1 mouse_genomes_project 2 135031957 135065129 + MGP_129S1SvImJ_P0057809 Smox protein_coding protein_coding MGP_129S1SvImJ_T0057810.1 MGP_129S1SvImJ_G0026531.1 mouse_genomes_project 2 135031957 135065129 + MGP_129S1SvImJ_P0057810 Smox protein_coding protein_coding MGP_129S1SvImJ_T0057811.1 MGP_129S1SvImJ_G0026531.1 mouse_genomes_project 2 135031957 135065129 + MGP_129S1SvImJ_P0057811 Smox protein_coding protein_coding MGP_129S1SvImJ_T0057812.1 MGP_129S1SvImJ_G0026531.1 mouse_genomes_project 2 135031957 135065129 + MGP_129S1SvImJ_P0057812 Smox protein_coding protein_coding MGP_129S1SvImJ_T0057813.1 MGP_129S1SvImJ_G0026531.1 mouse_genomes_project 2 135031978 135065879 + MGP_129S1SvImJ_P0057813 Smox protein_coding protein_coding MGP_129S1SvImJ_T0057814.1 MGP_129S1SvImJ_G0026531.1 mouse_genomes_project 2 135032007 135065124 + MGP_129S1SvImJ_P0057814 Smox protein_coding protein_coding MGP_129S1SvImJ_T0057815.1 MGP_129S1SvImJ_G0026531.1 mouse_genomes_project 2 135032278 135052044 + MGP_129S1SvImJ_P0057815 Smox protein_coding protein_coding MGP_129S1SvImJ_T0057816.1 MGP_129S1SvImJ_G0026531.1 mouse_genomes_project 2 135048818 135052081 + Smox protein_coding processed_transcript MGP_129S1SvImJ_T0057817.1 MGP_129S1SvImJ_G0026531.1 mouse_genomes_project 2 135060112 135064836 + MGP_129S1SvImJ_P0057817 Smox protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057818.1 MGP_129S1SvImJ_G0026531.1 mouse_genomes_project 2 135061851 135065098 + Smox protein_coding retained_intron MGP_129S1SvImJ_T0099657.1 MGP_129S1SvImJ_G0037724.1 mouse_genomes_project 2 15842891 15842996 + Gm25147 snRNA snRNA MGP_129S1SvImJ_T0055585.1 MGP_129S1SvImJ_G0025892.1 mouse_genomes_project 2 84379090 84415558 + Itgav protein_coding retained_intron MGP_129S1SvImJ_T0055586.1 MGP_129S1SvImJ_G0025892.1 mouse_genomes_project 2 84379090 84468010 + MGP_129S1SvImJ_P0055586 Itgav protein_coding protein_coding MGP_129S1SvImJ_T0055587.1 MGP_129S1SvImJ_G0025892.1 mouse_genomes_project 2 84379145 84402234 + MGP_129S1SvImJ_P0055587 Itgav protein_coding protein_coding MGP_129S1SvImJ_T0055588.1 MGP_129S1SvImJ_G0025892.1 mouse_genomes_project 2 84379150 84395432 + Itgav protein_coding processed_transcript MGP_129S1SvImJ_T0055589.1 MGP_129S1SvImJ_G0025892.1 mouse_genomes_project 2 84379159 84402662 + Itgav protein_coding retained_intron MGP_129S1SvImJ_T0055590.1 MGP_129S1SvImJ_G0025892.1 mouse_genomes_project 2 84379220 84380483 + Itgav protein_coding processed_transcript MGP_129S1SvImJ_T0055591.1 MGP_129S1SvImJ_G0025892.1 mouse_genomes_project 2 84379248 84468010 + MGP_129S1SvImJ_P0055591 Itgav protein_coding protein_coding MGP_129S1SvImJ_T0055592.1 MGP_129S1SvImJ_G0025892.1 mouse_genomes_project 2 84462942 84465079 + MGP_129S1SvImJ_P0055592 Itgav protein_coding protein_coding MGP_129S1SvImJ_T0055593.1 MGP_129S1SvImJ_G0025892.1 mouse_genomes_project 2 84464014 84468010 + MGP_129S1SvImJ_P0055593 Itgav protein_coding protein_coding MGP_129S1SvImJ_T0013447.1 MGP_129S1SvImJ_G0011536.1 mouse_genomes_project 2 12957639 12958612 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056118.1 MGP_129S1SvImJ_G0026149.1 mouse_genomes_project 2 92595913 92785294 - MGP_129S1SvImJ_P0056118 1110051M20Rik protein_coding protein_coding MGP_129S1SvImJ_T0056119.1 MGP_129S1SvImJ_G0026149.1 mouse_genomes_project 2 92601303 92785286 - MGP_129S1SvImJ_P0056119 1110051M20Rik protein_coding protein_coding MGP_129S1SvImJ_T0056120.1 MGP_129S1SvImJ_G0026149.1 mouse_genomes_project 2 92604210 92605646 - 1110051M20Rik protein_coding processed_transcript MGP_129S1SvImJ_T0056121.1 MGP_129S1SvImJ_G0026149.1 mouse_genomes_project 2 92627426 92785315 - 1110051M20Rik protein_coding processed_transcript MGP_129S1SvImJ_T0056122.1 MGP_129S1SvImJ_G0026149.1 mouse_genomes_project 2 92720004 92785341 - 1110051M20Rik protein_coding processed_transcript MGP_129S1SvImJ_T0056123.1 MGP_129S1SvImJ_G0026149.1 mouse_genomes_project 2 92758555 92785309 - 1110051M20Rik protein_coding processed_transcript MGP_129S1SvImJ_T0056124.1 MGP_129S1SvImJ_G0026149.1 mouse_genomes_project 2 92758604 92785376 - 1110051M20Rik protein_coding processed_transcript MGP_129S1SvImJ_T0004002.1 MGP_129S1SvImJ_G0003568.1 mouse_genomes_project 2 62037297 62155106 + Gm13561 antisense antisense MGP_129S1SvImJ_T0055777.1 MGP_129S1SvImJ_G0025984.1 mouse_genomes_project 2 87801564 87802557 + MGP_129S1SvImJ_P0055777 Olfr1094 protein_coding protein_coding MGP_129S1SvImJ_T0053638.1 MGP_129S1SvImJ_G0025540.1 mouse_genomes_project 2 27768248 27896630 + MGP_129S1SvImJ_P0053638 Rapgef1 protein_coding protein_coding MGP_129S1SvImJ_T0053639.1 MGP_129S1SvImJ_G0025540.1 mouse_genomes_project 2 27768269 27896640 + MGP_129S1SvImJ_P0053639 Rapgef1 protein_coding protein_coding MGP_129S1SvImJ_T0053640.1 MGP_129S1SvImJ_G0025540.1 mouse_genomes_project 2 27768298 27897250 + MGP_129S1SvImJ_P0053640 Rapgef1 protein_coding protein_coding MGP_129S1SvImJ_T0053641.1 MGP_129S1SvImJ_G0025540.1 mouse_genomes_project 2 27769145 27894604 + MGP_129S1SvImJ_P0053641 Rapgef1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053642.1 MGP_129S1SvImJ_G0025540.1 mouse_genomes_project 2 27853193 27896640 + MGP_129S1SvImJ_P0053642 Rapgef1 protein_coding protein_coding MGP_129S1SvImJ_T0053643.1 MGP_129S1SvImJ_G0025540.1 mouse_genomes_project 2 27884813 27892125 + Rapgef1 protein_coding processed_transcript MGP_129S1SvImJ_T0053644.1 MGP_129S1SvImJ_G0025540.1 mouse_genomes_project 2 27886771 27888434 + Rapgef1 protein_coding retained_intron MGP_129S1SvImJ_T0055660.1 MGP_129S1SvImJ_G0025909.1 mouse_genomes_project 2 85432289 85433776 - MGP_129S1SvImJ_P0055660 Gm19426 protein_coding protein_coding MGP_129S1SvImJ_T0007395.1 MGP_129S1SvImJ_G0006068.1 mouse_genomes_project 2 171597894 171611794 - Gm11464 lincRNA lincRNA MGP_129S1SvImJ_T0007216.1 MGP_129S1SvImJ_G0005919.1 mouse_genomes_project 2 59606877 59608574 + Gm13572 lincRNA lincRNA MGP_129S1SvImJ_T0059127.1 MGP_129S1SvImJ_G0026850.1 mouse_genomes_project 2 169838278 169849843 + Rbpjl protein_coding retained_intron MGP_129S1SvImJ_T0059128.1 MGP_129S1SvImJ_G0026850.1 mouse_genomes_project 2 169838331 169850500 + MGP_129S1SvImJ_P0059128 Rbpjl protein_coding protein_coding MGP_129S1SvImJ_T0059129.1 MGP_129S1SvImJ_G0026850.1 mouse_genomes_project 2 169838346 169846483 + Rbpjl protein_coding processed_transcript MGP_129S1SvImJ_T0013538.1 MGP_129S1SvImJ_G0011627.1 mouse_genomes_project 2 49760321 49760500 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013457.1 MGP_129S1SvImJ_G0011546.1 mouse_genomes_project 2 16354131 16354448 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054781.1 MGP_129S1SvImJ_G0025735.1 mouse_genomes_project 2 51761291 52036026 - MGP_129S1SvImJ_P0054781 Cacnb4 protein_coding protein_coding MGP_129S1SvImJ_T0054782.1 MGP_129S1SvImJ_G0025735.1 mouse_genomes_project 2 51761296 51904249 - MGP_129S1SvImJ_P0054782 Cacnb4 protein_coding protein_coding MGP_129S1SvImJ_T0054783.1 MGP_129S1SvImJ_G0025735.1 mouse_genomes_project 2 51761296 52036263 - MGP_129S1SvImJ_P0054783 Cacnb4 protein_coding protein_coding MGP_129S1SvImJ_T0054784.1 MGP_129S1SvImJ_G0025735.1 mouse_genomes_project 2 51761296 51904256 - MGP_129S1SvImJ_P0054784 Cacnb4 protein_coding protein_coding MGP_129S1SvImJ_T0054785.1 MGP_129S1SvImJ_G0025735.1 mouse_genomes_project 2 51901872 51902395 - Cacnb4 protein_coding processed_transcript MGP_129S1SvImJ_T0054786.1 MGP_129S1SvImJ_G0025735.1 mouse_genomes_project 2 52033691 52035588 - Cacnb4 protein_coding processed_transcript MGP_129S1SvImJ_T0052899.1 MGP_129S1SvImJ_G0025405.1 mouse_genomes_project 2 22000207 22010488 + MGP_129S1SvImJ_P0052899 Il1f6 protein_coding protein_coding MGP_129S1SvImJ_T0052900.1 MGP_129S1SvImJ_G0025405.1 mouse_genomes_project 2 22000294 22010311 + Il1f6 protein_coding processed_transcript MGP_129S1SvImJ_T0055294.1 MGP_129S1SvImJ_G0025829.1 mouse_genomes_project 2 72464757 72626591 + MGP_129S1SvImJ_P0055294 Zak protein_coding protein_coding MGP_129S1SvImJ_T0055295.1 MGP_129S1SvImJ_G0025829.1 mouse_genomes_project 2 72464848 72589951 + MGP_129S1SvImJ_P0055295 Zak protein_coding protein_coding MGP_129S1SvImJ_T0055296.1 MGP_129S1SvImJ_G0025829.1 mouse_genomes_project 2 72464884 72581693 + Zak protein_coding retained_intron MGP_129S1SvImJ_T0055297.1 MGP_129S1SvImJ_G0025829.1 mouse_genomes_project 2 72464897 72572311 + Zak protein_coding retained_intron MGP_129S1SvImJ_T0055298.1 MGP_129S1SvImJ_G0025829.1 mouse_genomes_project 2 72464914 72547385 + Zak protein_coding retained_intron MGP_129S1SvImJ_T0055299.1 MGP_129S1SvImJ_G0025829.1 mouse_genomes_project 2 72479784 72538164 + MGP_129S1SvImJ_P0055299 Zak protein_coding protein_coding MGP_129S1SvImJ_T0013543.1 MGP_129S1SvImJ_G0011632.1 mouse_genomes_project 2 50820279 50821382 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058876.1 MGP_129S1SvImJ_G0026784.1 mouse_genomes_project 2 162576005 162578336 + MGP_129S1SvImJ_P0058876 Nnat protein_coding protein_coding MGP_129S1SvImJ_T0058877.1 MGP_129S1SvImJ_G0026784.1 mouse_genomes_project 2 162576034 162578070 + MGP_129S1SvImJ_P0058877 Nnat protein_coding protein_coding MGP_129S1SvImJ_T0058878.1 MGP_129S1SvImJ_G0026784.1 mouse_genomes_project 2 162576037 162578354 + MGP_129S1SvImJ_P0058878 Nnat protein_coding protein_coding MGP_129S1SvImJ_T0058879.1 MGP_129S1SvImJ_G0026784.1 mouse_genomes_project 2 162576043 162578336 + MGP_129S1SvImJ_P0058879 Nnat protein_coding protein_coding MGP_129S1SvImJ_T0058880.1 MGP_129S1SvImJ_G0026784.1 mouse_genomes_project 2 162576048 162577824 + MGP_129S1SvImJ_P0058880 Nnat protein_coding protein_coding MGP_129S1SvImJ_T0058881.1 MGP_129S1SvImJ_G0026784.1 mouse_genomes_project 2 162576050 162577204 + MGP_129S1SvImJ_P0058881 Nnat protein_coding protein_coding MGP_129S1SvImJ_T0058882.1 MGP_129S1SvImJ_G0026784.1 mouse_genomes_project 2 162576051 162577614 + MGP_129S1SvImJ_P0058882 Nnat protein_coding protein_coding MGP_129S1SvImJ_T0058883.1 MGP_129S1SvImJ_G0026784.1 mouse_genomes_project 2 162576057 162577612 + MGP_129S1SvImJ_P0058883 Nnat protein_coding protein_coding MGP_129S1SvImJ_T0058884.1 MGP_129S1SvImJ_G0026784.1 mouse_genomes_project 2 162576067 162578349 + Nnat protein_coding retained_intron MGP_129S1SvImJ_T0058885.1 MGP_129S1SvImJ_G0026784.1 mouse_genomes_project 2 162576840 162577687 + Nnat protein_coding retained_intron MGP_129S1SvImJ_T0013449.1 MGP_129S1SvImJ_G0011538.1 mouse_genomes_project 2 13549895 13550508 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055650.1 MGP_129S1SvImJ_G0025906.1 mouse_genomes_project 2 85370112 85403101 - MGP_129S1SvImJ_P0055650 Zdhhc5 protein_coding protein_coding MGP_129S1SvImJ_T0055651.1 MGP_129S1SvImJ_G0025906.1 mouse_genomes_project 2 85397794 85402607 - Zdhhc5 protein_coding processed_transcript MGP_129S1SvImJ_T0055652.1 MGP_129S1SvImJ_G0025906.1 mouse_genomes_project 2 85397943 85402957 - Zdhhc5 protein_coding processed_transcript MGP_129S1SvImJ_T0059158.1 MGP_129S1SvImJ_G0026859.1 mouse_genomes_project 2 170036118 170041472 - MGP_129S1SvImJ_P0059158 protein_coding protein_coding MGP_129S1SvImJ_T0011536.1 MGP_129S1SvImJ_G0009652.1 mouse_genomes_project 2 149601213 149601538 - Gm22390 misc_RNA misc_RNA MGP_129S1SvImJ_T0010449.1 MGP_129S1SvImJ_G0008565.1 mouse_genomes_project 2 94034222 94034294 + Mir7221 miRNA miRNA MGP_129S1SvImJ_T0056175.1 MGP_129S1SvImJ_G0026158.1 mouse_genomes_project 2 93311093 93312533 + MGP_129S1SvImJ_P0056175 Chrm4 protein_coding protein_coding MGP_129S1SvImJ_T0056348.1 MGP_129S1SvImJ_G0026188.1 mouse_genomes_project 2 103430339 103445408 - MGP_129S1SvImJ_P0056348 B230118H07Rik protein_coding protein_coding MGP_129S1SvImJ_T0056349.1 MGP_129S1SvImJ_G0026188.1 mouse_genomes_project 2 103430404 103499673 - MGP_129S1SvImJ_P0056349 B230118H07Rik protein_coding protein_coding MGP_129S1SvImJ_T0056350.1 MGP_129S1SvImJ_G0026188.1 mouse_genomes_project 2 103430440 103499627 - MGP_129S1SvImJ_P0056350 B230118H07Rik protein_coding protein_coding MGP_129S1SvImJ_T0056351.1 MGP_129S1SvImJ_G0026188.1 mouse_genomes_project 2 103430444 103454207 - B230118H07Rik protein_coding processed_transcript MGP_129S1SvImJ_T0056352.1 MGP_129S1SvImJ_G0026188.1 mouse_genomes_project 2 103445317 103498980 - MGP_129S1SvImJ_P0056352 B230118H07Rik protein_coding protein_coding MGP_129S1SvImJ_T0056353.1 MGP_129S1SvImJ_G0026188.1 mouse_genomes_project 2 103479136 103499694 - B230118H07Rik protein_coding retained_intron MGP_129S1SvImJ_T0056354.1 MGP_129S1SvImJ_G0026188.1 mouse_genomes_project 2 103479662 103490884 - B230118H07Rik protein_coding retained_intron MGP_129S1SvImJ_T0056355.1 MGP_129S1SvImJ_G0026188.1 mouse_genomes_project 2 103480172 103520197 - B230118H07Rik protein_coding retained_intron MGP_129S1SvImJ_T0013690.1 MGP_129S1SvImJ_G0011779.1 mouse_genomes_project 2 98689600 98691001 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007207.1 MGP_129S1SvImJ_G0005912.1 mouse_genomes_project 2 50497952 50555899 + Gm13497 lincRNA lincRNA MGP_129S1SvImJ_T0007385.1 MGP_129S1SvImJ_G0006058.1 mouse_genomes_project 2 166393858 166437850 + Gm14243 lincRNA lincRNA MGP_129S1SvImJ_T0055865.1 MGP_129S1SvImJ_G0026059.1 mouse_genomes_project 2 89676065 89677004 + MGP_129S1SvImJ_P0055865 Olfr1188 protein_coding protein_coding MGP_129S1SvImJ_T0010355.1 MGP_129S1SvImJ_G0008471.1 mouse_genomes_project 2 7824127 7824224 + Mir669b miRNA miRNA MGP_129S1SvImJ_T0102450.1 MGP_129S1SvImJ_G0040284.1 mouse_genomes_project 2 181425378 181428377 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0058529.1 MGP_129S1SvImJ_G0026729.1 mouse_genomes_project 2 159930690 159936418 + Itch protein_coding retained_intron MGP_129S1SvImJ_T0058530.1 MGP_129S1SvImJ_G0026729.1 mouse_genomes_project 2 159930690 159974111 + Itch protein_coding retained_intron MGP_129S1SvImJ_T0058531.1 MGP_129S1SvImJ_G0026729.1 mouse_genomes_project 2 159930690 160029598 + MGP_129S1SvImJ_P0058531 Itch protein_coding protein_coding MGP_129S1SvImJ_T0058532.1 MGP_129S1SvImJ_G0026729.1 mouse_genomes_project 2 159930705 159978031 + Itch protein_coding retained_intron MGP_129S1SvImJ_T0058533.1 MGP_129S1SvImJ_G0026729.1 mouse_genomes_project 2 159930712 160004361 + Itch protein_coding processed_transcript MGP_129S1SvImJ_T0058534.1 MGP_129S1SvImJ_G0026729.1 mouse_genomes_project 2 159930740 160029596 + MGP_129S1SvImJ_P0058534 Itch protein_coding protein_coding MGP_129S1SvImJ_T0058535.1 MGP_129S1SvImJ_G0026729.1 mouse_genomes_project 2 159930742 160016017 + Itch protein_coding retained_intron MGP_129S1SvImJ_T0098355.1 MGP_129S1SvImJ_G0036440.1 mouse_genomes_project 2 105053382 105053801 + pseudogene pseudogene MGP_129S1SvImJ_T0004184.1 MGP_129S1SvImJ_G0003696.1 mouse_genomes_project 2 170695599 170700146 + Gm14397 antisense antisense MGP_129S1SvImJ_T0100955.1 MGP_129S1SvImJ_G0039022.1 mouse_genomes_project 2 98774744 98774867 + Gm22957 snoRNA snoRNA MGP_129S1SvImJ_T0053725.1 MGP_129S1SvImJ_G0025550.1 mouse_genomes_project 2 28225435 28242738 - MGP_129S1SvImJ_P0053725 Wdr34 protein_coding protein_coding MGP_129S1SvImJ_T0053726.1 MGP_129S1SvImJ_G0025550.1 mouse_genomes_project 2 28225801 28226395 - Wdr34 protein_coding retained_intron MGP_129S1SvImJ_T0053727.1 MGP_129S1SvImJ_G0025550.1 mouse_genomes_project 2 28227683 28228928 - Wdr34 protein_coding retained_intron MGP_129S1SvImJ_T0053728.1 MGP_129S1SvImJ_G0025550.1 mouse_genomes_project 2 28241028 28242718 - Wdr34 protein_coding processed_transcript MGP_129S1SvImJ_T0054456.1 MGP_129S1SvImJ_G0025659.1 mouse_genomes_project 2 34725981 34760080 + MGP_129S1SvImJ_P0054456 Morn5 protein_coding protein_coding MGP_129S1SvImJ_T0058515.1 MGP_129S1SvImJ_G0026726.1 mouse_genomes_project 2 159575285 159843591 + MGP_129S1SvImJ_P0058515 a protein_coding protein_coding MGP_129S1SvImJ_T0058520.1 MGP_129S1SvImJ_G0026726.1 mouse_genomes_project 2 159749934 159841523 + a protein_coding processed_transcript MGP_129S1SvImJ_T0058521.1 MGP_129S1SvImJ_G0026726.1 mouse_genomes_project 2 159749973 159846875 + MGP_129S1SvImJ_P0058521 a protein_coding protein_coding MGP_129S1SvImJ_T0058522.1 MGP_129S1SvImJ_G0026726.1 mouse_genomes_project 2 159824274 159846496 + MGP_129S1SvImJ_P0058522 a protein_coding protein_coding MGP_129S1SvImJ_T0058523.1 MGP_129S1SvImJ_G0026726.1 mouse_genomes_project 2 159824333 159846876 + MGP_129S1SvImJ_P0058523 a protein_coding protein_coding MGP_129S1SvImJ_T0058524.1 MGP_129S1SvImJ_G0026726.1 mouse_genomes_project 2 159843478 159846875 + a protein_coding retained_intron MGP_129S1SvImJ_T0056686.1 MGP_129S1SvImJ_G0026290.1 mouse_genomes_project 2 114830974 114866703 + MGP_129S1SvImJ_P0056686 Katnbl1 protein_coding protein_coding MGP_129S1SvImJ_T0056687.1 MGP_129S1SvImJ_G0026290.1 mouse_genomes_project 2 114830989 114859981 + Katnbl1 protein_coding retained_intron MGP_129S1SvImJ_T0055596.1 MGP_129S1SvImJ_G0025894.1 mouse_genomes_project 2 84579176 84603805 - MGP_129S1SvImJ_P0055596 Zswim2 protein_coding protein_coding MGP_129S1SvImJ_T0055597.1 MGP_129S1SvImJ_G0025894.1 mouse_genomes_project 2 84580861 84603807 - MGP_129S1SvImJ_P0055597 Zswim2 protein_coding protein_coding MGP_129S1SvImJ_T0055598.1 MGP_129S1SvImJ_G0025894.1 mouse_genomes_project 2 84587021 84592491 - Zswim2 protein_coding processed_transcript MGP_129S1SvImJ_T0004209.1 MGP_129S1SvImJ_G0003715.1 mouse_genomes_project 2 186848872 186856760 + Gata5os antisense antisense MGP_129S1SvImJ_T0054054.1 MGP_129S1SvImJ_G0025599.1 mouse_genomes_project 2 30690615 30700185 - MGP_129S1SvImJ_P0054054 Uck1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0054055.1 MGP_129S1SvImJ_G0025599.1 mouse_genomes_project 2 30691790 30695166 - MGP_129S1SvImJ_P0054055 Uck1 protein_coding protein_coding MGP_129S1SvImJ_T0054056.1 MGP_129S1SvImJ_G0025599.1 mouse_genomes_project 2 30693368 30695155 - Uck1 protein_coding retained_intron MGP_129S1SvImJ_T0054057.1 MGP_129S1SvImJ_G0025599.1 mouse_genomes_project 2 30693617 30700230 - Uck1 protein_coding retained_intron MGP_129S1SvImJ_T0055908.1 MGP_129S1SvImJ_G0026096.1 mouse_genomes_project 2 90607480 90608398 - MGP_129S1SvImJ_P0055908 Olfr1239 protein_coding protein_coding MGP_129S1SvImJ_T0059947.1 MGP_129S1SvImJ_G0027034.1 mouse_genomes_project 2 188311148 188316771 - MGP_129S1SvImJ_P0059947 Rgs19 protein_coding protein_coding MGP_129S1SvImJ_T0059948.1 MGP_129S1SvImJ_G0027034.1 mouse_genomes_project 2 188311154 188312236 - MGP_129S1SvImJ_P0059948 Rgs19 protein_coding protein_coding MGP_129S1SvImJ_T0059949.1 MGP_129S1SvImJ_G0027034.1 mouse_genomes_project 2 188311157 188316656 - MGP_129S1SvImJ_P0059949 Rgs19 protein_coding protein_coding MGP_129S1SvImJ_T0059950.1 MGP_129S1SvImJ_G0027034.1 mouse_genomes_project 2 188311239 188314553 - MGP_129S1SvImJ_P0059950 Rgs19 protein_coding protein_coding MGP_129S1SvImJ_T0059951.1 MGP_129S1SvImJ_G0027034.1 mouse_genomes_project 2 188311242 188316666 - MGP_129S1SvImJ_P0059951 Rgs19 protein_coding protein_coding MGP_129S1SvImJ_T0059952.1 MGP_129S1SvImJ_G0027034.1 mouse_genomes_project 2 188312070 188316367 - Rgs19 protein_coding processed_transcript MGP_129S1SvImJ_T0059953.1 MGP_129S1SvImJ_G0027034.1 mouse_genomes_project 2 188312155 188316685 - Rgs19 protein_coding processed_transcript MGP_129S1SvImJ_T0059954.1 MGP_129S1SvImJ_G0027034.1 mouse_genomes_project 2 188312397 188316643 - Rgs19 protein_coding processed_transcript MGP_129S1SvImJ_T0100945.1 MGP_129S1SvImJ_G0039012.1 mouse_genomes_project 2 62517115 62517251 - Gm22020 snoRNA snoRNA MGP_129S1SvImJ_T0056913.1 MGP_129S1SvImJ_G0026348.1 mouse_genomes_project 2 122475413 122483604 - MGP_129S1SvImJ_P0056913 Ndufaf1 protein_coding protein_coding MGP_129S1SvImJ_T0056914.1 MGP_129S1SvImJ_G0026348.1 mouse_genomes_project 2 122481163 122483577 - Ndufaf1 protein_coding processed_transcript MGP_129S1SvImJ_T0056915.1 MGP_129S1SvImJ_G0026348.1 mouse_genomes_project 2 122481343 122483592 - Ndufaf1 protein_coding processed_transcript MGP_129S1SvImJ_T0004081.1 MGP_129S1SvImJ_G0003618.1 mouse_genomes_project 2 118110119 118135637 - Gm13977 antisense antisense MGP_129S1SvImJ_T0010442.1 MGP_129S1SvImJ_G0008558.1 mouse_genomes_project 2 77486514 77486596 - Gm44360 miRNA miRNA MGP_129S1SvImJ_T0058561.1 MGP_129S1SvImJ_G0026735.1 mouse_genomes_project 2 160315041 160339723 - MGP_129S1SvImJ_P0058561 Ggt7 protein_coding protein_coding MGP_129S1SvImJ_T0058562.1 MGP_129S1SvImJ_G0026735.1 mouse_genomes_project 2 160319624 160324054 - Ggt7 protein_coding retained_intron MGP_129S1SvImJ_T0058563.1 MGP_129S1SvImJ_G0026735.1 mouse_genomes_project 2 160320693 160328032 - Ggt7 protein_coding retained_intron MGP_129S1SvImJ_T0058564.1 MGP_129S1SvImJ_G0026735.1 mouse_genomes_project 2 160325654 160331840 - MGP_129S1SvImJ_P0058564 Ggt7 protein_coding protein_coding MGP_129S1SvImJ_T0058565.1 MGP_129S1SvImJ_G0026735.1 mouse_genomes_project 2 160329658 160344274 - MGP_129S1SvImJ_P0058565 Ggt7 protein_coding protein_coding MGP_129S1SvImJ_T0100995.1 MGP_129S1SvImJ_G0039062.1 mouse_genomes_project 2 166205500 166205625 + Gm25561 snoRNA snoRNA MGP_129S1SvImJ_T0100957.1 MGP_129S1SvImJ_G0039024.1 mouse_genomes_project 2 98917348 98917477 - Gm23317 snoRNA snoRNA MGP_129S1SvImJ_T0001058.1 MGP_129S1SvImJ_G0000987.1 mouse_genomes_project 2 9817727 9820789 - TEC TEC MGP_129S1SvImJ_T0101886.1 MGP_129S1SvImJ_G0039811.1 mouse_genomes_project 2 37435811 37452295 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0057286.1 MGP_129S1SvImJ_G0026412.1 mouse_genomes_project 2 125303882 125308540 - MGP_129S1SvImJ_P0057286 Duoxa1 protein_coding protein_coding MGP_129S1SvImJ_T0057287.1 MGP_129S1SvImJ_G0026412.1 mouse_genomes_project 2 125305241 125315278 - MGP_129S1SvImJ_P0057287 Duoxa1 protein_coding protein_coding MGP_129S1SvImJ_T0057288.1 MGP_129S1SvImJ_G0026412.1 mouse_genomes_project 2 125305244 125307403 - Duoxa1 protein_coding processed_transcript MGP_129S1SvImJ_T0057289.1 MGP_129S1SvImJ_G0026412.1 mouse_genomes_project 2 125305436 125308518 - MGP_129S1SvImJ_P0057289 Duoxa1 protein_coding protein_coding MGP_129S1SvImJ_T0057290.1 MGP_129S1SvImJ_G0026412.1 mouse_genomes_project 2 125306460 125315315 - MGP_129S1SvImJ_P0057290 Duoxa1 protein_coding protein_coding MGP_129S1SvImJ_T0057291.1 MGP_129S1SvImJ_G0026412.1 mouse_genomes_project 2 125306906 125315229 - MGP_129S1SvImJ_P0057291 Duoxa1 protein_coding protein_coding MGP_129S1SvImJ_T0057292.1 MGP_129S1SvImJ_G0026412.1 mouse_genomes_project 2 125307285 125315236 - MGP_129S1SvImJ_P0057292 Duoxa1 protein_coding protein_coding MGP_129S1SvImJ_T0054985.1 MGP_129S1SvImJ_G0025771.1 mouse_genomes_project 2 62190074 62269099 - MGP_129S1SvImJ_P0054985 Fap protein_coding protein_coding MGP_129S1SvImJ_T0054986.1 MGP_129S1SvImJ_G0025771.1 mouse_genomes_project 2 62190244 62269004 - Fap protein_coding processed_transcript MGP_129S1SvImJ_T0054987.1 MGP_129S1SvImJ_G0025771.1 mouse_genomes_project 2 62190254 62192557 - MGP_129S1SvImJ_P0054987 Fap protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054988.1 MGP_129S1SvImJ_G0025771.1 mouse_genomes_project 2 62190315 62268875 - MGP_129S1SvImJ_P0054988 Fap protein_coding protein_coding MGP_129S1SvImJ_T0054989.1 MGP_129S1SvImJ_G0025771.1 mouse_genomes_project 2 62190315 62268875 - MGP_129S1SvImJ_P0054989 Fap protein_coding protein_coding MGP_129S1SvImJ_T0054990.1 MGP_129S1SvImJ_G0025771.1 mouse_genomes_project 2 62190315 62268875 - MGP_129S1SvImJ_P0054990 Fap protein_coding protein_coding MGP_129S1SvImJ_T0054991.1 MGP_129S1SvImJ_G0025771.1 mouse_genomes_project 2 62217637 62257531 - Fap protein_coding retained_intron MGP_129S1SvImJ_T0054992.1 MGP_129S1SvImJ_G0025771.1 mouse_genomes_project 2 62226071 62268947 - Fap protein_coding retained_intron MGP_129S1SvImJ_T0054993.1 MGP_129S1SvImJ_G0025771.1 mouse_genomes_project 2 62240708 62268584 - MGP_129S1SvImJ_P0054993 Fap protein_coding protein_coding MGP_129S1SvImJ_T0013586.1 MGP_129S1SvImJ_G0011675.1 mouse_genomes_project 2 65070770 65071779 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017929.1 MGP_129S1SvImJ_G0015483.1 mouse_genomes_project 2 163172762 163173514 + Gm20412 processed_transcript processed_transcript MGP_129S1SvImJ_T0055578.1 MGP_129S1SvImJ_G0025891.1 mouse_genomes_project 2 84292693 84314413 + MGP_129S1SvImJ_P0055578 Zc3h15 protein_coding protein_coding MGP_129S1SvImJ_T0055579.1 MGP_129S1SvImJ_G0025891.1 mouse_genomes_project 2 84292739 84306561 + Zc3h15 protein_coding processed_transcript MGP_129S1SvImJ_T0055580.1 MGP_129S1SvImJ_G0025891.1 mouse_genomes_project 2 84292795 84301811 + Zc3h15 protein_coding processed_transcript MGP_129S1SvImJ_T0055581.1 MGP_129S1SvImJ_G0025891.1 mouse_genomes_project 2 84292881 84308449 + Zc3h15 protein_coding processed_transcript MGP_129S1SvImJ_T0055582.1 MGP_129S1SvImJ_G0025891.1 mouse_genomes_project 2 84304878 84306325 + Zc3h15 protein_coding processed_transcript MGP_129S1SvImJ_T0055583.1 MGP_129S1SvImJ_G0025891.1 mouse_genomes_project 2 84305371 84309800 + Zc3h15 protein_coding processed_transcript MGP_129S1SvImJ_T0055584.1 MGP_129S1SvImJ_G0025891.1 mouse_genomes_project 2 84308275 84314413 + Zc3h15 protein_coding processed_transcript MGP_129S1SvImJ_T0057575.1 MGP_129S1SvImJ_G0026481.1 mouse_genomes_project 2 132408129 132418122 - MGP_129S1SvImJ_P0057575 protein_coding protein_coding MGP_129S1SvImJ_T0004193.1 MGP_129S1SvImJ_G0003705.1 mouse_genomes_project 2 176549937 176562182 - Gm16796 antisense antisense MGP_129S1SvImJ_T0053251.1 MGP_129S1SvImJ_G0025468.1 mouse_genomes_project 2 23665087 23669127 + MGP_129S1SvImJ_P0053251 Obp2b protein_coding protein_coding MGP_129S1SvImJ_T0056194.1 MGP_129S1SvImJ_G0026162.1 mouse_genomes_project 2 93374691 93420593 - MGP_129S1SvImJ_P0056194 Creb3l1 protein_coding protein_coding MGP_129S1SvImJ_T0055953.1 MGP_129S1SvImJ_G0026127.1 mouse_genomes_project 2 91624335 91627474 + MGP_129S1SvImJ_P0055953 protein_coding protein_coding MGP_129S1SvImJ_T0055955.1 MGP_129S1SvImJ_G0026127.1 mouse_genomes_project 2 91626284 91627460 + MGP_129S1SvImJ_P0055955 protein_coding protein_coding MGP_129S1SvImJ_T0007206.1 MGP_129S1SvImJ_G0005911.1 mouse_genomes_project 2 50472951 50473432 + Gm28639 lincRNA lincRNA MGP_129S1SvImJ_T0007410.1 MGP_129S1SvImJ_G0006079.1 mouse_genomes_project 2 173605176 173612682 - 1200007C13Rik lincRNA lincRNA MGP_129S1SvImJ_T0007300.1 MGP_129S1SvImJ_G0005989.1 mouse_genomes_project 2 117362425 117575056 + lincRNA lincRNA MGP_129S1SvImJ_T0057444.1 MGP_129S1SvImJ_G0026447.1 mouse_genomes_project 2 130253545 130285735 + Ap4e1 protein_coding retained_intron MGP_129S1SvImJ_T0057445.1 MGP_129S1SvImJ_G0026447.1 mouse_genomes_project 2 130253549 130258392 + Ap4e1 protein_coding retained_intron MGP_129S1SvImJ_T0057446.1 MGP_129S1SvImJ_G0026447.1 mouse_genomes_project 2 130253552 130294476 + MGP_129S1SvImJ_P0057446 Ap4e1 protein_coding protein_coding MGP_129S1SvImJ_T0057447.1 MGP_129S1SvImJ_G0026447.1 mouse_genomes_project 2 130253558 130320046 + MGP_129S1SvImJ_P0057447 Ap4e1 protein_coding protein_coding MGP_129S1SvImJ_T0057448.1 MGP_129S1SvImJ_G0026447.1 mouse_genomes_project 2 130253580 130275620 + MGP_129S1SvImJ_P0057448 Ap4e1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057449.1 MGP_129S1SvImJ_G0026447.1 mouse_genomes_project 2 130253582 130311513 + MGP_129S1SvImJ_P0057449 Ap4e1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057450.1 MGP_129S1SvImJ_G0026447.1 mouse_genomes_project 2 130253582 130296793 + MGP_129S1SvImJ_P0057450 Ap4e1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057451.1 MGP_129S1SvImJ_G0026447.1 mouse_genomes_project 2 130298962 130311342 + MGP_129S1SvImJ_P0057451 Ap4e1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055767.1 MGP_129S1SvImJ_G0025975.1 mouse_genomes_project 2 87432008 87432950 + MGP_129S1SvImJ_P0055767 Olfr1076 protein_coding protein_coding MGP_129S1SvImJ_T0054158.1 MGP_129S1SvImJ_G0025614.1 mouse_genomes_project 2 31075738 31097562 + MGP_129S1SvImJ_P0054158 St6galnac6 protein_coding protein_coding MGP_129S1SvImJ_T0054159.1 MGP_129S1SvImJ_G0025614.1 mouse_genomes_project 2 31075755 31096615 + MGP_129S1SvImJ_P0054159 St6galnac6 protein_coding protein_coding MGP_129S1SvImJ_T0054160.1 MGP_129S1SvImJ_G0025614.1 mouse_genomes_project 2 31083067 31098846 + MGP_129S1SvImJ_P0054160 St6galnac6 protein_coding protein_coding MGP_129S1SvImJ_T0054161.1 MGP_129S1SvImJ_G0025614.1 mouse_genomes_project 2 31083098 31098839 + MGP_129S1SvImJ_P0054161 St6galnac6 protein_coding protein_coding MGP_129S1SvImJ_T0054162.1 MGP_129S1SvImJ_G0025614.1 mouse_genomes_project 2 31083112 31098839 + MGP_129S1SvImJ_P0054162 St6galnac6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054163.1 MGP_129S1SvImJ_G0025614.1 mouse_genomes_project 2 31084143 31098837 + MGP_129S1SvImJ_P0054163 St6galnac6 protein_coding protein_coding MGP_129S1SvImJ_T0054164.1 MGP_129S1SvImJ_G0025614.1 mouse_genomes_project 2 31084157 31094852 + St6galnac6 protein_coding retained_intron MGP_129S1SvImJ_T0054165.1 MGP_129S1SvImJ_G0025614.1 mouse_genomes_project 2 31084536 31098837 + MGP_129S1SvImJ_P0054165 St6galnac6 protein_coding protein_coding MGP_129S1SvImJ_T0054166.1 MGP_129S1SvImJ_G0025614.1 mouse_genomes_project 2 31084789 31088400 + MGP_129S1SvImJ_P0054166 St6galnac6 protein_coding protein_coding MGP_129S1SvImJ_T0054167.1 MGP_129S1SvImJ_G0025614.1 mouse_genomes_project 2 31085085 31090968 + MGP_129S1SvImJ_P0054167 St6galnac6 protein_coding protein_coding MGP_129S1SvImJ_T0054168.1 MGP_129S1SvImJ_G0025614.1 mouse_genomes_project 2 31085115 31090988 + MGP_129S1SvImJ_P0054168 St6galnac6 protein_coding protein_coding MGP_129S1SvImJ_T0007442.1 MGP_129S1SvImJ_G0006108.1 mouse_genomes_project 2 187388558 187456131 - Gm14342 lincRNA lincRNA MGP_129S1SvImJ_T0056870.1 MGP_129S1SvImJ_G0026335.1 mouse_genomes_project 2 121909260 121912336 + MGP_129S1SvImJ_P0056870 Gm14137 protein_coding protein_coding MGP_129S1SvImJ_T0017824.1 MGP_129S1SvImJ_G0015432.1 mouse_genomes_project 2 78345746 78347461 - Gm13727 processed_transcript processed_transcript MGP_129S1SvImJ_T0054895.1 MGP_129S1SvImJ_G0025758.1 mouse_genomes_project 2 59462753 59576533 - MGP_129S1SvImJ_P0054895 Baz2b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0054896.1 MGP_129S1SvImJ_G0025758.1 mouse_genomes_project 2 59462757 59699849 - MGP_129S1SvImJ_P0054896 Baz2b protein_coding protein_coding MGP_129S1SvImJ_T0054897.1 MGP_129S1SvImJ_G0025758.1 mouse_genomes_project 2 59462839 59573407 - MGP_129S1SvImJ_P0054897 Baz2b protein_coding protein_coding MGP_129S1SvImJ_T0054898.1 MGP_129S1SvImJ_G0025758.1 mouse_genomes_project 2 59466581 59475944 - MGP_129S1SvImJ_P0054898 Baz2b protein_coding protein_coding MGP_129S1SvImJ_T0054899.1 MGP_129S1SvImJ_G0025758.1 mouse_genomes_project 2 59477587 59487364 - Baz2b protein_coding processed_transcript MGP_129S1SvImJ_T0054900.1 MGP_129S1SvImJ_G0025758.1 mouse_genomes_project 2 59480319 59483983 - Baz2b protein_coding processed_transcript MGP_129S1SvImJ_T0054901.1 MGP_129S1SvImJ_G0025758.1 mouse_genomes_project 2 59488153 59514382 - MGP_129S1SvImJ_P0054901 Baz2b protein_coding protein_coding MGP_129S1SvImJ_T0054902.1 MGP_129S1SvImJ_G0025758.1 mouse_genomes_project 2 59519627 59526208 - Baz2b protein_coding processed_transcript MGP_129S1SvImJ_T0054903.1 MGP_129S1SvImJ_G0025758.1 mouse_genomes_project 2 59545211 59699892 - Baz2b protein_coding processed_transcript MGP_129S1SvImJ_T0054904.1 MGP_129S1SvImJ_G0025758.1 mouse_genomes_project 2 59550316 59660893 - Baz2b protein_coding processed_transcript MGP_129S1SvImJ_T0054905.1 MGP_129S1SvImJ_G0025758.1 mouse_genomes_project 2 59571768 59699744 - Baz2b protein_coding processed_transcript MGP_129S1SvImJ_T0054906.1 MGP_129S1SvImJ_G0025758.1 mouse_genomes_project 2 59647632 59790614 - Baz2b protein_coding processed_transcript MGP_129S1SvImJ_T0054907.1 MGP_129S1SvImJ_G0025758.1 mouse_genomes_project 2 59786912 59790576 - Baz2b protein_coding processed_transcript MGP_129S1SvImJ_T0054908.1 MGP_129S1SvImJ_G0025758.1 mouse_genomes_project 2 59787379 59789934 - Baz2b protein_coding processed_transcript MGP_129S1SvImJ_T0054909.1 MGP_129S1SvImJ_G0025758.1 mouse_genomes_project 2 59787380 59790523 - Baz2b protein_coding processed_transcript MGP_129S1SvImJ_T0059580.1 MGP_129S1SvImJ_G0026961.1 mouse_genomes_project 2 180045542 180100227 + MGP_129S1SvImJ_P0059580 Vapb protein_coding protein_coding MGP_129S1SvImJ_T0059581.1 MGP_129S1SvImJ_G0026961.1 mouse_genomes_project 2 180083181 180093958 + Vapb protein_coding processed_transcript MGP_129S1SvImJ_T0053190.1 MGP_129S1SvImJ_G0025452.1 mouse_genomes_project 2 23392215 23396944 + MGP_129S1SvImJ_P0053190 Fbxw5 protein_coding protein_coding MGP_129S1SvImJ_T0053191.1 MGP_129S1SvImJ_G0025452.1 mouse_genomes_project 2 23392288 23395023 + Fbxw5 protein_coding processed_transcript MGP_129S1SvImJ_T0053192.1 MGP_129S1SvImJ_G0025452.1 mouse_genomes_project 2 23392290 23395286 + Fbxw5 protein_coding processed_transcript MGP_129S1SvImJ_T0053193.1 MGP_129S1SvImJ_G0025452.1 mouse_genomes_project 2 23392331 23394659 + Fbxw5 protein_coding processed_transcript MGP_129S1SvImJ_T0053194.1 MGP_129S1SvImJ_G0025452.1 mouse_genomes_project 2 23392351 23395077 + Fbxw5 protein_coding processed_transcript MGP_129S1SvImJ_T0053195.1 MGP_129S1SvImJ_G0025452.1 mouse_genomes_project 2 23394030 23395057 + Fbxw5 protein_coding processed_transcript MGP_129S1SvImJ_T0053196.1 MGP_129S1SvImJ_G0025452.1 mouse_genomes_project 2 23394510 23395273 + Fbxw5 protein_coding processed_transcript MGP_129S1SvImJ_T0053197.1 MGP_129S1SvImJ_G0025452.1 mouse_genomes_project 2 23394698 23396307 + MGP_129S1SvImJ_P0053197 Fbxw5 protein_coding protein_coding MGP_129S1SvImJ_T0053198.1 MGP_129S1SvImJ_G0025452.1 mouse_genomes_project 2 23395379 23396418 + Fbxw5 protein_coding processed_transcript MGP_129S1SvImJ_T0013777.1 MGP_129S1SvImJ_G0011866.1 mouse_genomes_project 2 134844842 134845121 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0052343.1 MGP_129S1SvImJ_G0025311.1 mouse_genomes_project 2 494865 508331 + MGP_129S1SvImJ_P0052343 protein_coding protein_coding MGP_129S1SvImJ_T0010509.1 MGP_129S1SvImJ_G0008625.1 mouse_genomes_project 2 188199270 188199339 - Mir7006 miRNA miRNA MGP_129S1SvImJ_T0013778.1 MGP_129S1SvImJ_G0011867.1 mouse_genomes_project 2 134939518 134939843 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0052384.1 MGP_129S1SvImJ_G0025317.1 mouse_genomes_project 2 1998442 2026743 + MGP_129S1SvImJ_P0052384 Phyh protein_coding protein_coding MGP_129S1SvImJ_T0052385.1 MGP_129S1SvImJ_G0025317.1 mouse_genomes_project 2 1998503 2011219 + Phyh protein_coding processed_transcript MGP_129S1SvImJ_T0052386.1 MGP_129S1SvImJ_G0025317.1 mouse_genomes_project 2 2023309 2024170 + Phyh protein_coding processed_transcript MGP_129S1SvImJ_T0057674.1 MGP_129S1SvImJ_G0026505.1 mouse_genomes_project 2 133884341 133898041 + Vps16 protein_coding retained_intron MGP_129S1SvImJ_T0057675.1 MGP_129S1SvImJ_G0026505.1 mouse_genomes_project 2 133884367 133903857 + MGP_129S1SvImJ_P0057675 Vps16 protein_coding protein_coding MGP_129S1SvImJ_T0057676.1 MGP_129S1SvImJ_G0026505.1 mouse_genomes_project 2 133884367 133899505 + MGP_129S1SvImJ_P0057676 Vps16 protein_coding protein_coding MGP_129S1SvImJ_T0057677.1 MGP_129S1SvImJ_G0026505.1 mouse_genomes_project 2 133884406 133899884 + Vps16 protein_coding processed_transcript MGP_129S1SvImJ_T0057678.1 MGP_129S1SvImJ_G0026505.1 mouse_genomes_project 2 133897223 133898655 + Vps16 protein_coding retained_intron MGP_129S1SvImJ_T0057679.1 MGP_129S1SvImJ_G0026505.1 mouse_genomes_project 2 133899217 133901293 + Vps16 protein_coding retained_intron MGP_129S1SvImJ_T0057680.1 MGP_129S1SvImJ_G0026505.1 mouse_genomes_project 2 133899909 133900895 + Vps16 protein_coding retained_intron MGP_129S1SvImJ_T0057681.1 MGP_129S1SvImJ_G0026505.1 mouse_genomes_project 2 133901195 133902987 + Vps16 protein_coding retained_intron MGP_129S1SvImJ_T0057682.1 MGP_129S1SvImJ_G0026505.1 mouse_genomes_project 2 133902754 133903322 + Vps16 protein_coding retained_intron MGP_129S1SvImJ_T0052491.1 MGP_129S1SvImJ_G0025334.1 mouse_genomes_project 2 7218057 7220727 + MGP_129S1SvImJ_P0052491 4930412O13Rik protein_coding protein_coding MGP_129S1SvImJ_T0052492.1 MGP_129S1SvImJ_G0025334.1 mouse_genomes_project 2 7219441 7220141 + MGP_129S1SvImJ_P0052492 4930412O13Rik protein_coding protein_coding MGP_129S1SvImJ_T0013439.1 MGP_129S1SvImJ_G0011528.1 mouse_genomes_project 2 9515188 9520056 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054498.1 MGP_129S1SvImJ_G0025682.1 mouse_genomes_project 2 35617770 35618718 + MGP_129S1SvImJ_P0054498 Olfr356 protein_coding protein_coding MGP_129S1SvImJ_T0010382.1 MGP_129S1SvImJ_G0008498.1 mouse_genomes_project 2 7875900 7875981 + Mir466h miRNA miRNA MGP_129S1SvImJ_T0003918.1 MGP_129S1SvImJ_G0003504.1 mouse_genomes_project 2 8937574 8946238 + Gm10851 antisense antisense MGP_129S1SvImJ_T0057939.1 MGP_129S1SvImJ_G0026560.1 mouse_genomes_project 2 140663715 140681197 - MGP_129S1SvImJ_P0057939 Mkks protein_coding protein_coding MGP_129S1SvImJ_T0057940.1 MGP_129S1SvImJ_G0026560.1 mouse_genomes_project 2 140663715 140681204 - MGP_129S1SvImJ_P0057940 Mkks protein_coding protein_coding MGP_129S1SvImJ_T0057941.1 MGP_129S1SvImJ_G0026560.1 mouse_genomes_project 2 140670575 140680969 - MGP_129S1SvImJ_P0057941 Mkks protein_coding protein_coding MGP_129S1SvImJ_T0057892.1 MGP_129S1SvImJ_G0026552.1 mouse_genomes_project 2 138198612 138252574 - MGP_129S1SvImJ_P0057892 Hao1 protein_coding protein_coding MGP_129S1SvImJ_T0057893.1 MGP_129S1SvImJ_G0026552.1 mouse_genomes_project 2 138225888 138252513 - Hao1 protein_coding processed_transcript MGP_129S1SvImJ_T0010450.1 MGP_129S1SvImJ_G0008566.1 mouse_genomes_project 2 94036618 94036693 + Mir7222 miRNA miRNA MGP_129S1SvImJ_T0055890.1 MGP_129S1SvImJ_G0026082.1 mouse_genomes_project 2 90296507 90297443 - MGP_129S1SvImJ_P0055890 Olfr1221 protein_coding protein_coding MGP_129S1SvImJ_T0098558.1 MGP_129S1SvImJ_G0036643.1 mouse_genomes_project 2 27594808 27594943 + Gm24976 rRNA rRNA MGP_129S1SvImJ_T0010448.1 MGP_129S1SvImJ_G0008564.1 mouse_genomes_project 2 93818047 93818110 - Mir7000 miRNA miRNA MGP_129S1SvImJ_T0055716.1 MGP_129S1SvImJ_G0025926.1 mouse_genomes_project 2 86196448 86197393 - MGP_129S1SvImJ_P0055716 Olfr994 protein_coding protein_coding MGP_129S1SvImJ_T0054999.1 MGP_129S1SvImJ_G0025773.1 mouse_genomes_project 2 62364855 62396861 + MGP_129S1SvImJ_P0054999 Gca protein_coding protein_coding MGP_129S1SvImJ_T0055000.1 MGP_129S1SvImJ_G0025773.1 mouse_genomes_project 2 62387559 62392855 + Gca protein_coding processed_transcript MGP_129S1SvImJ_T0013429.1 MGP_129S1SvImJ_G0011518.1 mouse_genomes_project 2 5385281 5385935 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057573.1 MGP_129S1SvImJ_G0026480.1 mouse_genomes_project 2 132334623 132386943 + MGP_129S1SvImJ_P0057573 Zc3h6 protein_coding protein_coding MGP_129S1SvImJ_T0057574.1 MGP_129S1SvImJ_G0026480.1 mouse_genomes_project 2 132334630 132361560 + MGP_129S1SvImJ_P0057574 Zc3h6 protein_coding protein_coding MGP_129S1SvImJ_T0100985.1 MGP_129S1SvImJ_G0039052.1 mouse_genomes_project 2 155834435 155834571 - Gm23261 snoRNA snoRNA MGP_129S1SvImJ_T0007441.1 MGP_129S1SvImJ_G0006107.1 mouse_genomes_project 2 187375431 187382670 - Gm14340 lincRNA lincRNA MGP_129S1SvImJ_T0056371.1 MGP_129S1SvImJ_G0026193.1 mouse_genomes_project 2 103767191 103779346 + Commd9 protein_coding processed_transcript MGP_129S1SvImJ_T0056372.1 MGP_129S1SvImJ_G0026193.1 mouse_genomes_project 2 103767197 103784032 + MGP_129S1SvImJ_P0056372 Commd9 protein_coding protein_coding MGP_129S1SvImJ_T0056373.1 MGP_129S1SvImJ_G0026193.1 mouse_genomes_project 2 103767204 103779612 + Commd9 protein_coding retained_intron MGP_129S1SvImJ_T0056374.1 MGP_129S1SvImJ_G0026193.1 mouse_genomes_project 2 103767207 103777805 + Commd9 protein_coding retained_intron MGP_129S1SvImJ_T0001048.1 MGP_129S1SvImJ_G0000977.1 mouse_genomes_project 2 8385495 8385606 - TEC TEC MGP_129S1SvImJ_T0055887.1 MGP_129S1SvImJ_G0026079.1 mouse_genomes_project 2 90240914 90241850 - MGP_129S1SvImJ_P0055887 Olfr1218 protein_coding protein_coding MGP_129S1SvImJ_T0011531.1 MGP_129S1SvImJ_G0009647.1 mouse_genomes_project 2 119568207 119568520 + Gm24914 misc_RNA misc_RNA MGP_129S1SvImJ_T0058607.1 MGP_129S1SvImJ_G0026743.1 mouse_genomes_project 2 160619718 160667069 + MGP_129S1SvImJ_P0058607 Mmp24 protein_coding protein_coding MGP_129S1SvImJ_T0058608.1 MGP_129S1SvImJ_G0026743.1 mouse_genomes_project 2 160652793 160658305 + Mmp24 protein_coding retained_intron MGP_129S1SvImJ_T0059811.1 MGP_129S1SvImJ_G0027011.1 mouse_genomes_project 2 187721171 187731455 - MGP_129S1SvImJ_P0059811 Eef1a2 protein_coding protein_coding MGP_129S1SvImJ_T0054479.1 MGP_129S1SvImJ_G0025664.1 mouse_genomes_project 2 35057187 35058108 + MGP_129S1SvImJ_P0054479 Olfr338 protein_coding protein_coding MGP_129S1SvImJ_T0101002.1 MGP_129S1SvImJ_G0039069.1 mouse_genomes_project 2 174178444 174178581 + Gm22704 snoRNA snoRNA MGP_129S1SvImJ_T0054006.1 MGP_129S1SvImJ_G0025593.1 mouse_genomes_project 2 30344721 30369916 + MGP_129S1SvImJ_P0054006 Aif1l protein_coding protein_coding MGP_129S1SvImJ_T0054007.1 MGP_129S1SvImJ_G0025593.1 mouse_genomes_project 2 30344738 30372135 + MGP_129S1SvImJ_P0054007 Aif1l protein_coding protein_coding MGP_129S1SvImJ_T0054008.1 MGP_129S1SvImJ_G0025593.1 mouse_genomes_project 2 30344850 30368439 + Aif1l protein_coding retained_intron MGP_129S1SvImJ_T0054009.1 MGP_129S1SvImJ_G0025593.1 mouse_genomes_project 2 30344904 30370022 + Aif1l protein_coding retained_intron MGP_129S1SvImJ_T0054010.1 MGP_129S1SvImJ_G0025593.1 mouse_genomes_project 2 30358308 30369708 + Aif1l protein_coding processed_transcript MGP_129S1SvImJ_T0054011.1 MGP_129S1SvImJ_G0025593.1 mouse_genomes_project 2 30359289 30368435 + Aif1l protein_coding processed_transcript MGP_129S1SvImJ_T0054012.1 MGP_129S1SvImJ_G0025593.1 mouse_genomes_project 2 30359879 30369632 + Aif1l protein_coding retained_intron MGP_129S1SvImJ_T0054013.1 MGP_129S1SvImJ_G0025593.1 mouse_genomes_project 2 30361229 30369679 + Aif1l protein_coding processed_transcript MGP_129S1SvImJ_T0054014.1 MGP_129S1SvImJ_G0025593.1 mouse_genomes_project 2 30368008 30369839 + Aif1l protein_coding retained_intron MGP_129S1SvImJ_T0004055.1 MGP_129S1SvImJ_G0003605.1 mouse_genomes_project 2 103925000 103956453 + Gm13919 antisense antisense MGP_129S1SvImJ_T0004056.1 MGP_129S1SvImJ_G0003605.1 mouse_genomes_project 2 103925008 103927635 + Gm13919 antisense antisense MGP_129S1SvImJ_T0102420.1 MGP_129S1SvImJ_G0040254.1 mouse_genomes_project 2 88894852 88895789 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0013499.1 MGP_129S1SvImJ_G0011588.1 mouse_genomes_project 2 34140267 34140574 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013467.1 MGP_129S1SvImJ_G0011556.1 mouse_genomes_project 2 20494476 20494811 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013824.1 MGP_129S1SvImJ_G0011913.1 mouse_genomes_project 2 152389812 152390306 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010428.1 MGP_129S1SvImJ_G0008544.1 mouse_genomes_project 2 41358844 41358974 - Mir6336 miRNA miRNA MGP_129S1SvImJ_T0057925.1 MGP_129S1SvImJ_G0026557.1 mouse_genomes_project 2 139843770 140178965 - MGP_129S1SvImJ_P0057925 Pak7 protein_coding protein_coding MGP_129S1SvImJ_T0057926.1 MGP_129S1SvImJ_G0026557.1 mouse_genomes_project 2 139844563 140178987 - MGP_129S1SvImJ_P0057926 Pak7 protein_coding protein_coding MGP_129S1SvImJ_T0057927.1 MGP_129S1SvImJ_G0026557.1 mouse_genomes_project 2 140050007 140178994 - Pak7 protein_coding retained_intron MGP_129S1SvImJ_T0100983.1 MGP_129S1SvImJ_G0039050.1 mouse_genomes_project 2 155737739 155737875 - snoRNA snoRNA MGP_129S1SvImJ_T0059921.1 MGP_129S1SvImJ_G0027029.1 mouse_genomes_project 2 188193201 188204174 - MGP_129S1SvImJ_P0059921 Zfp512b protein_coding protein_coding MGP_129S1SvImJ_T0059922.1 MGP_129S1SvImJ_G0027029.1 mouse_genomes_project 2 188193203 188202291 - MGP_129S1SvImJ_P0059922 Zfp512b protein_coding protein_coding MGP_129S1SvImJ_T0059923.1 MGP_129S1SvImJ_G0027029.1 mouse_genomes_project 2 188195956 188197770 - Zfp512b protein_coding retained_intron MGP_129S1SvImJ_T0059924.1 MGP_129S1SvImJ_G0027029.1 mouse_genomes_project 2 188196544 188197676 - MGP_129S1SvImJ_P0059924 Zfp512b protein_coding protein_coding MGP_129S1SvImJ_T0059925.1 MGP_129S1SvImJ_G0027029.1 mouse_genomes_project 2 188196550 188197728 - MGP_129S1SvImJ_P0059925 Zfp512b protein_coding protein_coding MGP_129S1SvImJ_T0059926.1 MGP_129S1SvImJ_G0027029.1 mouse_genomes_project 2 188198087 188199017 - Zfp512b protein_coding retained_intron MGP_129S1SvImJ_T0059927.1 MGP_129S1SvImJ_G0027029.1 mouse_genomes_project 2 188198483 188200111 - MGP_129S1SvImJ_P0059927 Zfp512b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059928.1 MGP_129S1SvImJ_G0027029.1 mouse_genomes_project 2 188199437 188200658 - Zfp512b protein_coding processed_transcript MGP_129S1SvImJ_T0059929.1 MGP_129S1SvImJ_G0027029.1 mouse_genomes_project 2 188201394 188204129 - Zfp512b protein_coding processed_transcript MGP_129S1SvImJ_T0059930.1 MGP_129S1SvImJ_G0027029.1 mouse_genomes_project 2 188201893 188204174 - MGP_129S1SvImJ_P0059930 Zfp512b protein_coding protein_coding MGP_129S1SvImJ_T0055775.1 MGP_129S1SvImJ_G0025982.1 mouse_genomes_project 2 87752598 87753567 + MGP_129S1SvImJ_P0055775 Olfr1093 protein_coding protein_coding MGP_129S1SvImJ_T0056003.1 MGP_129S1SvImJ_G0026136.1 mouse_genomes_project 2 92191665 92197451 + MGP_129S1SvImJ_P0056003 Kbtbd4 protein_coding protein_coding MGP_129S1SvImJ_T0056004.1 MGP_129S1SvImJ_G0026136.1 mouse_genomes_project 2 92191668 92197451 + MGP_129S1SvImJ_P0056004 Kbtbd4 protein_coding protein_coding MGP_129S1SvImJ_T0056005.1 MGP_129S1SvImJ_G0026136.1 mouse_genomes_project 2 92191694 92192543 + Kbtbd4 protein_coding processed_transcript MGP_129S1SvImJ_T0056006.1 MGP_129S1SvImJ_G0026136.1 mouse_genomes_project 2 92192000 92192979 + Kbtbd4 protein_coding processed_transcript MGP_129S1SvImJ_T0056007.1 MGP_129S1SvImJ_G0026136.1 mouse_genomes_project 2 92196053 92198516 + Kbtbd4 protein_coding processed_transcript MGP_129S1SvImJ_T0059417.1 MGP_129S1SvImJ_G0026913.1 mouse_genomes_project 2 173217785 173232327 - MGP_129S1SvImJ_P0059417 Spata2 protein_coding protein_coding MGP_129S1SvImJ_T0059418.1 MGP_129S1SvImJ_G0026913.1 mouse_genomes_project 2 173224002 173225313 - Spata2 protein_coding retained_intron MGP_129S1SvImJ_T0059419.1 MGP_129S1SvImJ_G0026913.1 mouse_genomes_project 2 173224837 173232354 - Spata2 protein_coding processed_transcript MGP_129S1SvImJ_T0059420.1 MGP_129S1SvImJ_G0026913.1 mouse_genomes_project 2 173224888 173232327 - Spata2 protein_coding processed_transcript MGP_129S1SvImJ_T0059421.1 MGP_129S1SvImJ_G0026913.1 mouse_genomes_project 2 173224995 173232360 - Spata2 protein_coding processed_transcript MGP_129S1SvImJ_T0099691.1 MGP_129S1SvImJ_G0037758.1 mouse_genomes_project 2 120751101 120751259 - Gm25308 snRNA snRNA MGP_129S1SvImJ_T0013870.1 MGP_129S1SvImJ_G0011959.1 mouse_genomes_project 2 168175580 168176210 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058398.1 MGP_129S1SvImJ_G0026691.1 mouse_genomes_project 2 157915449 157964091 + MGP_129S1SvImJ_P0058398 Kif3b protein_coding protein_coding MGP_129S1SvImJ_T0013729.1 MGP_129S1SvImJ_G0011818.1 mouse_genomes_project 2 112559405 112560390 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013767.1 MGP_129S1SvImJ_G0011856.1 mouse_genomes_project 2 131951393 131951603 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059534.1 MGP_129S1SvImJ_G0026946.1 mouse_genomes_project 2 178622766 178631329 - MGP_129S1SvImJ_P0059534 Gcnt7 protein_coding protein_coding MGP_129S1SvImJ_T0059535.1 MGP_129S1SvImJ_G0026946.1 mouse_genomes_project 2 178622767 178627215 - MGP_129S1SvImJ_P0059535 Gcnt7 protein_coding protein_coding MGP_129S1SvImJ_T0056284.1 MGP_129S1SvImJ_G0026178.1 mouse_genomes_project 2 95175868 95344362 - MGP_129S1SvImJ_P0056284 Ext2 protein_coding protein_coding MGP_129S1SvImJ_T0056285.1 MGP_129S1SvImJ_G0026178.1 mouse_genomes_project 2 95211763 95344381 - MGP_129S1SvImJ_P0056285 Ext2 protein_coding protein_coding MGP_129S1SvImJ_T0056286.1 MGP_129S1SvImJ_G0026178.1 mouse_genomes_project 2 95212245 95221235 - Ext2 protein_coding retained_intron MGP_129S1SvImJ_T0056287.1 MGP_129S1SvImJ_G0026178.1 mouse_genomes_project 2 95212259 95344358 - MGP_129S1SvImJ_P0056287 Ext2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056288.1 MGP_129S1SvImJ_G0026178.1 mouse_genomes_project 2 95219081 95223445 - MGP_129S1SvImJ_P0056288 Ext2 protein_coding protein_coding MGP_129S1SvImJ_T0056289.1 MGP_129S1SvImJ_G0026178.1 mouse_genomes_project 2 95219664 95220635 - MGP_129S1SvImJ_P0056289 Ext2 protein_coding protein_coding MGP_129S1SvImJ_T0056290.1 MGP_129S1SvImJ_G0026178.1 mouse_genomes_project 2 95232071 95344362 - Ext2 protein_coding processed_transcript MGP_129S1SvImJ_T0056291.1 MGP_129S1SvImJ_G0026178.1 mouse_genomes_project 2 95283153 95318062 - Ext2 protein_coding retained_intron MGP_129S1SvImJ_T0056292.1 MGP_129S1SvImJ_G0026178.1 mouse_genomes_project 2 95328193 95344378 - MGP_129S1SvImJ_P0056292 Ext2 protein_coding protein_coding MGP_129S1SvImJ_T0056293.1 MGP_129S1SvImJ_G0026178.1 mouse_genomes_project 2 95335203 95344358 - Ext2 protein_coding retained_intron MGP_129S1SvImJ_T0056294.1 MGP_129S1SvImJ_G0026178.1 mouse_genomes_project 2 95335628 95344361 - MGP_129S1SvImJ_P0056294 Ext2 protein_coding protein_coding MGP_129S1SvImJ_T0056295.1 MGP_129S1SvImJ_G0026178.1 mouse_genomes_project 2 95336013 95344366 - Ext2 protein_coding processed_transcript MGP_129S1SvImJ_T0053240.1 MGP_129S1SvImJ_G0025463.1 mouse_genomes_project 2 23572992 23576542 + MGP_129S1SvImJ_P0053240 Lcn5 protein_coding protein_coding MGP_129S1SvImJ_T0053241.1 MGP_129S1SvImJ_G0025463.1 mouse_genomes_project 2 23572995 23576686 + MGP_129S1SvImJ_P0053241 Lcn5 protein_coding protein_coding MGP_129S1SvImJ_T0053242.1 MGP_129S1SvImJ_G0025463.1 mouse_genomes_project 2 23572995 23577018 + MGP_129S1SvImJ_P0053242 Lcn5 protein_coding protein_coding MGP_129S1SvImJ_T0053243.1 MGP_129S1SvImJ_G0025463.1 mouse_genomes_project 2 23575962 23576682 + Lcn5 protein_coding processed_transcript MGP_129S1SvImJ_T0059968.1 MGP_129S1SvImJ_G0027037.1 mouse_genomes_project 2 188386419 188455413 + MGP_129S1SvImJ_P0059968 Myt1 protein_coding protein_coding MGP_129S1SvImJ_T0059969.1 MGP_129S1SvImJ_G0027037.1 mouse_genomes_project 2 188386483 188457804 + MGP_129S1SvImJ_P0059969 Myt1 protein_coding protein_coding MGP_129S1SvImJ_T0059970.1 MGP_129S1SvImJ_G0027037.1 mouse_genomes_project 2 188390116 188422151 + Myt1 protein_coding processed_transcript MGP_129S1SvImJ_T0059971.1 MGP_129S1SvImJ_G0027037.1 mouse_genomes_project 2 188390390 188431151 + MGP_129S1SvImJ_P0059971 Myt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059972.1 MGP_129S1SvImJ_G0027037.1 mouse_genomes_project 2 188408750 188441754 + MGP_129S1SvImJ_P0059972 Myt1 protein_coding protein_coding MGP_129S1SvImJ_T0059973.1 MGP_129S1SvImJ_G0027037.1 mouse_genomes_project 2 188422565 188455348 + Myt1 protein_coding retained_intron MGP_129S1SvImJ_T0059974.1 MGP_129S1SvImJ_G0027037.1 mouse_genomes_project 2 188423856 188432682 + Myt1 protein_coding processed_transcript MGP_129S1SvImJ_T0059975.1 MGP_129S1SvImJ_G0027037.1 mouse_genomes_project 2 188437339 188446240 + MGP_129S1SvImJ_P0059975 Myt1 protein_coding protein_coding MGP_129S1SvImJ_T0059976.1 MGP_129S1SvImJ_G0027037.1 mouse_genomes_project 2 188445699 188448138 + Myt1 protein_coding retained_intron MGP_129S1SvImJ_T0056928.1 MGP_129S1SvImJ_G0026352.1 mouse_genomes_project 2 122593646 122620215 - MGP_129S1SvImJ_P0056928 Rpap1 protein_coding protein_coding MGP_129S1SvImJ_T0056929.1 MGP_129S1SvImJ_G0026352.1 mouse_genomes_project 2 122594298 122620254 - MGP_129S1SvImJ_P0056929 Rpap1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0056930.1 MGP_129S1SvImJ_G0026352.1 mouse_genomes_project 2 122594300 122620239 - MGP_129S1SvImJ_P0056930 Rpap1 protein_coding protein_coding MGP_129S1SvImJ_T0056931.1 MGP_129S1SvImJ_G0026352.1 mouse_genomes_project 2 122594301 122620248 - MGP_129S1SvImJ_P0056931 Rpap1 protein_coding protein_coding MGP_129S1SvImJ_T0056932.1 MGP_129S1SvImJ_G0026352.1 mouse_genomes_project 2 122594304 122620211 - MGP_129S1SvImJ_P0056932 Rpap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056933.1 MGP_129S1SvImJ_G0026352.1 mouse_genomes_project 2 122594307 122620231 - MGP_129S1SvImJ_P0056933 Rpap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056934.1 MGP_129S1SvImJ_G0026352.1 mouse_genomes_project 2 122598236 122620230 - Rpap1 protein_coding retained_intron MGP_129S1SvImJ_T0056935.1 MGP_129S1SvImJ_G0026352.1 mouse_genomes_project 2 122609150 122620225 - Rpap1 protein_coding retained_intron MGP_129S1SvImJ_T0056936.1 MGP_129S1SvImJ_G0026352.1 mouse_genomes_project 2 122609364 122612877 - Rpap1 protein_coding retained_intron MGP_129S1SvImJ_T0056937.1 MGP_129S1SvImJ_G0026352.1 mouse_genomes_project 2 122609707 122620240 - Rpap1 protein_coding processed_transcript MGP_129S1SvImJ_T0056669.1 MGP_129S1SvImJ_G0026284.1 mouse_genomes_project 2 114682534 114690183 + MGP_129S1SvImJ_P0056669 Lpcat4 protein_coding protein_coding MGP_129S1SvImJ_T0056670.1 MGP_129S1SvImJ_G0026284.1 mouse_genomes_project 2 114684550 114687113 + Lpcat4 protein_coding processed_transcript MGP_129S1SvImJ_T0056671.1 MGP_129S1SvImJ_G0026284.1 mouse_genomes_project 2 114685035 114685825 + Lpcat4 protein_coding processed_transcript MGP_129S1SvImJ_T0056672.1 MGP_129S1SvImJ_G0026284.1 mouse_genomes_project 2 114687637 114690029 + Lpcat4 protein_coding processed_transcript MGP_129S1SvImJ_T0059988.1 MGP_129S1SvImJ_G0027040.1 mouse_genomes_project 2 188551078 188552274 + MGP_129S1SvImJ_P0059988 protein_coding protein_coding MGP_129S1SvImJ_T0100939.1 MGP_129S1SvImJ_G0039006.1 mouse_genomes_project 2 53111675 53111784 - Gm23315 snoRNA snoRNA MGP_129S1SvImJ_T0011548.1 MGP_129S1SvImJ_G0009664.1 mouse_genomes_project 2 187397221 187397339 + Gm22842 misc_RNA misc_RNA MGP_129S1SvImJ_T0054480.1 MGP_129S1SvImJ_G0025665.1 mouse_genomes_project 2 35113392 35114322 + MGP_129S1SvImJ_P0054480 Olfr339 protein_coding protein_coding MGP_129S1SvImJ_T0054523.1 MGP_129S1SvImJ_G0025695.1 mouse_genomes_project 2 36122731 36133681 - MGP_129S1SvImJ_P0054523 Zbtb26 protein_coding protein_coding MGP_129S1SvImJ_T0054524.1 MGP_129S1SvImJ_G0025695.1 mouse_genomes_project 2 36125581 36133680 - MGP_129S1SvImJ_P0054524 Zbtb26 protein_coding protein_coding MGP_129S1SvImJ_T0054525.1 MGP_129S1SvImJ_G0025695.1 mouse_genomes_project 2 36129038 36133695 - Zbtb26 protein_coding processed_transcript MGP_129S1SvImJ_T0013660.1 MGP_129S1SvImJ_G0011749.1 mouse_genomes_project 2 88361544 88361740 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057282.1 MGP_129S1SvImJ_G0026409.1 mouse_genomes_project 2 125224667 125257317 + MGP_129S1SvImJ_P0057282 Sord protein_coding protein_coding MGP_129S1SvImJ_T0100958.1 MGP_129S1SvImJ_G0039025.1 mouse_genomes_project 2 106316696 106316823 - Gm22501 snoRNA snoRNA MGP_129S1SvImJ_T0004046.1 MGP_129S1SvImJ_G0003598.1 mouse_genomes_project 2 80972491 80978120 + Gm13752 antisense antisense MGP_129S1SvImJ_T0056483.1 MGP_129S1SvImJ_G0026215.1 mouse_genomes_project 2 106203144 106205128 + MGP_129S1SvImJ_P0056483 A930018P22Rik protein_coding protein_coding MGP_129S1SvImJ_T0011544.1 MGP_129S1SvImJ_G0009660.1 mouse_genomes_project 2 172762570 172762759 + Gm27494 misc_RNA misc_RNA MGP_129S1SvImJ_T0102387.1 MGP_129S1SvImJ_G0040221.1 mouse_genomes_project 2 35225407 35225710 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0054002.1 MGP_129S1SvImJ_G0025591.1 mouse_genomes_project 2 30193686 30230529 - MGP_129S1SvImJ_P0054002 Fibcd1 protein_coding protein_coding MGP_129S1SvImJ_T0057193.1 MGP_129S1SvImJ_G0026388.1 mouse_genomes_project 2 124247630 124249967 + MGP_129S1SvImJ_P0057193 Ckmt1 protein_coding protein_coding MGP_129S1SvImJ_T0057194.1 MGP_129S1SvImJ_G0026388.1 mouse_genomes_project 2 124247692 124253641 + MGP_129S1SvImJ_P0057194 Ckmt1 protein_coding protein_coding MGP_129S1SvImJ_T0057195.1 MGP_129S1SvImJ_G0026388.1 mouse_genomes_project 2 124247756 124249704 + MGP_129S1SvImJ_P0057195 Ckmt1 protein_coding protein_coding MGP_129S1SvImJ_T0057196.1 MGP_129S1SvImJ_G0026388.1 mouse_genomes_project 2 124247823 124250895 + MGP_129S1SvImJ_P0057196 Ckmt1 protein_coding protein_coding MGP_129S1SvImJ_T0057197.1 MGP_129S1SvImJ_G0026388.1 mouse_genomes_project 2 124248528 124253641 + MGP_129S1SvImJ_P0057197 Ckmt1 protein_coding protein_coding MGP_129S1SvImJ_T0057198.1 MGP_129S1SvImJ_G0026388.1 mouse_genomes_project 2 124248574 124250892 + MGP_129S1SvImJ_P0057198 Ckmt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057199.1 MGP_129S1SvImJ_G0026388.1 mouse_genomes_project 2 124248577 124250288 + Ckmt1 protein_coding retained_intron MGP_129S1SvImJ_T0057200.1 MGP_129S1SvImJ_G0026388.1 mouse_genomes_project 2 124248584 124250534 + MGP_129S1SvImJ_P0057200 Ckmt1 protein_coding protein_coding MGP_129S1SvImJ_T0057201.1 MGP_129S1SvImJ_G0026388.1 mouse_genomes_project 2 124248762 124249946 + MGP_129S1SvImJ_P0057201 Ckmt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057202.1 MGP_129S1SvImJ_G0026388.1 mouse_genomes_project 2 124252825 124253640 + Ckmt1 protein_coding retained_intron MGP_129S1SvImJ_T0058157.1 MGP_129S1SvImJ_G0026619.1 mouse_genomes_project 2 153207330 153215723 - MGP_129S1SvImJ_P0058157 9230104L09Rik protein_coding protein_coding MGP_129S1SvImJ_T0058158.1 MGP_129S1SvImJ_G0026619.1 mouse_genomes_project 2 153207523 153231473 - 9230104L09Rik protein_coding processed_transcript MGP_129S1SvImJ_T0059561.1 MGP_129S1SvImJ_G0026953.1 mouse_genomes_project 2 179340715 179368059 - MGP_129S1SvImJ_P0059561 Ctcfl protein_coding protein_coding MGP_129S1SvImJ_T0013486.1 MGP_129S1SvImJ_G0011575.1 mouse_genomes_project 2 27634938 27635229 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056258.1 MGP_129S1SvImJ_G0026173.1 mouse_genomes_project 2 94679126 94690527 + MGP_129S1SvImJ_P0056258 Trp53i11 protein_coding protein_coding MGP_129S1SvImJ_T0056259.1 MGP_129S1SvImJ_G0026173.1 mouse_genomes_project 2 94679126 94693367 + MGP_129S1SvImJ_P0056259 Trp53i11 protein_coding protein_coding MGP_129S1SvImJ_T0056260.1 MGP_129S1SvImJ_G0026173.1 mouse_genomes_project 2 94679139 94691057 + Trp53i11 protein_coding processed_transcript MGP_129S1SvImJ_T0056261.1 MGP_129S1SvImJ_G0026173.1 mouse_genomes_project 2 94679139 94691916 + Trp53i11 protein_coding processed_transcript MGP_129S1SvImJ_T0056262.1 MGP_129S1SvImJ_G0026173.1 mouse_genomes_project 2 94679162 94693357 + MGP_129S1SvImJ_P0056262 Trp53i11 protein_coding protein_coding MGP_129S1SvImJ_T0056263.1 MGP_129S1SvImJ_G0026173.1 mouse_genomes_project 2 94679248 94681141 + Trp53i11 protein_coding processed_transcript MGP_129S1SvImJ_T0056264.1 MGP_129S1SvImJ_G0026173.1 mouse_genomes_project 2 94680769 94693365 + Trp53i11 protein_coding processed_transcript MGP_129S1SvImJ_T0056265.1 MGP_129S1SvImJ_G0026173.1 mouse_genomes_project 2 94690526 94692206 + Trp53i11 protein_coding processed_transcript MGP_129S1SvImJ_T0010445.1 MGP_129S1SvImJ_G0008561.1 mouse_genomes_project 2 92743142 92743225 - Gm22071 miRNA miRNA MGP_129S1SvImJ_T0058498.1 MGP_129S1SvImJ_G0026722.1 mouse_genomes_project 2 159375967 159411461 + MGP_129S1SvImJ_P0058498 Zfp341 protein_coding protein_coding MGP_129S1SvImJ_T0058499.1 MGP_129S1SvImJ_G0026722.1 mouse_genomes_project 2 159376026 159411418 + MGP_129S1SvImJ_P0058499 Zfp341 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058500.1 MGP_129S1SvImJ_G0026722.1 mouse_genomes_project 2 159376040 159411418 + MGP_129S1SvImJ_P0058500 Zfp341 protein_coding protein_coding MGP_129S1SvImJ_T0054482.1 MGP_129S1SvImJ_G0025667.1 mouse_genomes_project 2 35169342 35170284 - MGP_129S1SvImJ_P0054482 Olfr341 protein_coding protein_coding MGP_129S1SvImJ_T0004029.1 MGP_129S1SvImJ_G0003587.1 mouse_genomes_project 2 73645853 73654234 + Gm13709 antisense antisense MGP_129S1SvImJ_T0055946.1 MGP_129S1SvImJ_G0026121.1 mouse_genomes_project 2 91254972 91255881 - MGP_129S1SvImJ_P0055946 Olfr140 protein_coding protein_coding MGP_129S1SvImJ_T0055947.1 MGP_129S1SvImJ_G0026121.1 mouse_genomes_project 2 91254972 91267950 - MGP_129S1SvImJ_P0055947 Olfr140 protein_coding protein_coding MGP_129S1SvImJ_T0004003.1 MGP_129S1SvImJ_G0003569.1 mouse_genomes_project 2 62523796 62525349 + Gm13569 antisense antisense MGP_129S1SvImJ_T0056138.1 MGP_129S1SvImJ_G0026152.1 mouse_genomes_project 2 92973869 92986008 - MGP_129S1SvImJ_P0056138 F2 protein_coding protein_coding MGP_129S1SvImJ_T0056139.1 MGP_129S1SvImJ_G0026152.1 mouse_genomes_project 2 92973878 92986001 - MGP_129S1SvImJ_P0056139 F2 protein_coding protein_coding MGP_129S1SvImJ_T0056140.1 MGP_129S1SvImJ_G0026152.1 mouse_genomes_project 2 92980766 92985989 - F2 protein_coding processed_transcript MGP_129S1SvImJ_T0001086.1 MGP_129S1SvImJ_G0001015.1 mouse_genomes_project 2 33911937 33913558 + TEC TEC MGP_129S1SvImJ_T0003969.1 MGP_129S1SvImJ_G0003544.1 mouse_genomes_project 2 30667451 30671052 - Gm13610 antisense antisense MGP_129S1SvImJ_T0004100.1 MGP_129S1SvImJ_G0003634.1 mouse_genomes_project 2 132557709 132559184 - Gm14029 antisense antisense MGP_129S1SvImJ_T0059084.1 MGP_129S1SvImJ_G0026830.1 mouse_genomes_project 2 169185669 169193803 + Wisp2 protein_coding processed_transcript MGP_129S1SvImJ_T0059085.1 MGP_129S1SvImJ_G0026830.1 mouse_genomes_project 2 169185697 169197931 + MGP_129S1SvImJ_P0059085 Wisp2 protein_coding protein_coding MGP_129S1SvImJ_T0013491.1 MGP_129S1SvImJ_G0011580.1 mouse_genomes_project 2 30863735 30866658 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056464.1 MGP_129S1SvImJ_G0026209.1 mouse_genomes_project 2 105988880 106049420 - 4931422A03Rik protein_coding processed_transcript MGP_129S1SvImJ_T0056471.1 MGP_129S1SvImJ_G0026209.1 mouse_genomes_project 2 106016042 106049929 - MGP_129S1SvImJ_P0056471 4931422A03Rik protein_coding protein_coding MGP_129S1SvImJ_T0056472.1 MGP_129S1SvImJ_G0026209.1 mouse_genomes_project 2 106047520 106049982 - 4931422A03Rik protein_coding retained_intron MGP_129S1SvImJ_T0056822.1 MGP_129S1SvImJ_G0026324.1 mouse_genomes_project 2 121518890 121545875 + MGP_129S1SvImJ_P0056822 Knstrn protein_coding protein_coding MGP_129S1SvImJ_T0056823.1 MGP_129S1SvImJ_G0026324.1 mouse_genomes_project 2 121519119 121542423 + MGP_129S1SvImJ_P0056823 Knstrn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056824.1 MGP_129S1SvImJ_G0026324.1 mouse_genomes_project 2 121519119 121542355 + MGP_129S1SvImJ_P0056824 Knstrn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056825.1 MGP_129S1SvImJ_G0026324.1 mouse_genomes_project 2 121519120 121542332 + MGP_129S1SvImJ_P0056825 Knstrn protein_coding protein_coding MGP_129S1SvImJ_T0056826.1 MGP_129S1SvImJ_G0026324.1 mouse_genomes_project 2 121519141 121542816 + MGP_129S1SvImJ_P0056826 Knstrn protein_coding protein_coding MGP_129S1SvImJ_T0056827.1 MGP_129S1SvImJ_G0026324.1 mouse_genomes_project 2 121519164 121539214 + MGP_129S1SvImJ_P0056827 Knstrn protein_coding protein_coding MGP_129S1SvImJ_T0056828.1 MGP_129S1SvImJ_G0026324.1 mouse_genomes_project 2 121519183 121542242 + MGP_129S1SvImJ_P0056828 Knstrn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056829.1 MGP_129S1SvImJ_G0026324.1 mouse_genomes_project 2 121539811 121545322 + MGP_129S1SvImJ_P0056829 Knstrn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056830.1 MGP_129S1SvImJ_G0026324.1 mouse_genomes_project 2 121542248 121566066 + MGP_129S1SvImJ_P0056830 Knstrn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0001043.1 MGP_129S1SvImJ_G0000972.1 mouse_genomes_project 2 786414 787689 - TEC TEC MGP_129S1SvImJ_T0055797.1 MGP_129S1SvImJ_G0026003.1 mouse_genomes_project 2 88340181 88341105 + MGP_129S1SvImJ_P0055797 Olfr1118 protein_coding protein_coding MGP_129S1SvImJ_T0013501.1 MGP_129S1SvImJ_G0011590.1 mouse_genomes_project 2 35451766 35452339 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056216.1 MGP_129S1SvImJ_G0026164.1 mouse_genomes_project 2 93795709 93801650 - MGP_129S1SvImJ_P0056216 Gyltl1b protein_coding protein_coding MGP_129S1SvImJ_T0056217.1 MGP_129S1SvImJ_G0026164.1 mouse_genomes_project 2 93795709 93801721 - MGP_129S1SvImJ_P0056217 Gyltl1b protein_coding protein_coding MGP_129S1SvImJ_T0056218.1 MGP_129S1SvImJ_G0026164.1 mouse_genomes_project 2 93795710 93801700 - Gyltl1b protein_coding retained_intron MGP_129S1SvImJ_T0056219.1 MGP_129S1SvImJ_G0026164.1 mouse_genomes_project 2 93795714 93801682 - MGP_129S1SvImJ_P0056219 Gyltl1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056220.1 MGP_129S1SvImJ_G0026164.1 mouse_genomes_project 2 93795715 93801675 - MGP_129S1SvImJ_P0056220 Gyltl1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056221.1 MGP_129S1SvImJ_G0026164.1 mouse_genomes_project 2 93795723 93801692 - MGP_129S1SvImJ_P0056221 Gyltl1b protein_coding protein_coding MGP_129S1SvImJ_T0056222.1 MGP_129S1SvImJ_G0026164.1 mouse_genomes_project 2 93795723 93802631 - MGP_129S1SvImJ_P0056222 Gyltl1b protein_coding protein_coding MGP_129S1SvImJ_T0056223.1 MGP_129S1SvImJ_G0026164.1 mouse_genomes_project 2 93795734 93801697 - MGP_129S1SvImJ_P0056223 Gyltl1b protein_coding protein_coding MGP_129S1SvImJ_T0056224.1 MGP_129S1SvImJ_G0026164.1 mouse_genomes_project 2 93796455 93797185 - Gyltl1b protein_coding retained_intron MGP_129S1SvImJ_T0056225.1 MGP_129S1SvImJ_G0026164.1 mouse_genomes_project 2 93796638 93797440 - Gyltl1b protein_coding retained_intron MGP_129S1SvImJ_T0056226.1 MGP_129S1SvImJ_G0026164.1 mouse_genomes_project 2 93797681 93800138 - Gyltl1b protein_coding retained_intron MGP_129S1SvImJ_T0056227.1 MGP_129S1SvImJ_G0026164.1 mouse_genomes_project 2 93797977 93800325 - Gyltl1b protein_coding processed_transcript MGP_129S1SvImJ_T0056228.1 MGP_129S1SvImJ_G0026164.1 mouse_genomes_project 2 93798050 93800737 - Gyltl1b protein_coding retained_intron MGP_129S1SvImJ_T0056229.1 MGP_129S1SvImJ_G0026164.1 mouse_genomes_project 2 93798732 93801697 - Gyltl1b protein_coding retained_intron MGP_129S1SvImJ_T0056230.1 MGP_129S1SvImJ_G0026164.1 mouse_genomes_project 2 93800369 93801682 - Gyltl1b protein_coding retained_intron MGP_129S1SvImJ_T0056231.1 MGP_129S1SvImJ_G0026164.1 mouse_genomes_project 2 93800598 93805533 - MGP_129S1SvImJ_P0056231 Gyltl1b protein_coding protein_coding MGP_129S1SvImJ_T0056232.1 MGP_129S1SvImJ_G0026164.1 mouse_genomes_project 2 93800648 93802609 - Gyltl1b protein_coding retained_intron MGP_129S1SvImJ_T0056661.1 MGP_129S1SvImJ_G0026276.1 mouse_genomes_project 2 114410177 114411140 - MGP_129S1SvImJ_P0056661 Olfr1309 protein_coding protein_coding MGP_129S1SvImJ_T0013444.1 MGP_129S1SvImJ_G0011533.1 mouse_genomes_project 2 12686585 12687669 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059460.1 MGP_129S1SvImJ_G0026925.1 mouse_genomes_project 2 174061809 174064687 + MGP_129S1SvImJ_P0059460 Mocs3 protein_coding protein_coding MGP_129S1SvImJ_T0055751.1 MGP_129S1SvImJ_G0025959.1 mouse_genomes_project 2 87015253 87016213 - MGP_129S1SvImJ_P0055751 Olfr52 protein_coding protein_coding MGP_129S1SvImJ_T0100963.1 MGP_129S1SvImJ_G0039030.1 mouse_genomes_project 2 114954106 114954235 + Gm22676 snoRNA snoRNA MGP_129S1SvImJ_T0010469.1 MGP_129S1SvImJ_G0008585.1 mouse_genomes_project 2 125682024 125682103 + Mir147 miRNA miRNA MGP_129S1SvImJ_T0007271.1 MGP_129S1SvImJ_G0005967.1 mouse_genomes_project 2 94954267 94971318 + Gm10804 lincRNA lincRNA MGP_129S1SvImJ_T0007272.1 MGP_129S1SvImJ_G0005967.1 mouse_genomes_project 2 94954268 94958168 + Gm10804 lincRNA lincRNA MGP_129S1SvImJ_T0007273.1 MGP_129S1SvImJ_G0005967.1 mouse_genomes_project 2 94954269 94967847 + Gm10804 lincRNA lincRNA MGP_129S1SvImJ_T0007274.1 MGP_129S1SvImJ_G0005967.1 mouse_genomes_project 2 94969885 94970122 + Gm10804 lincRNA lincRNA MGP_129S1SvImJ_T0098860.1 MGP_129S1SvImJ_G0036939.1 mouse_genomes_project 2 117457760 117458779 + Gm28492 sense_intronic sense_intronic MGP_129S1SvImJ_T0099664.1 MGP_129S1SvImJ_G0037731.1 mouse_genomes_project 2 26665222 26665326 + Gm22675 snRNA snRNA MGP_129S1SvImJ_T0001079.1 MGP_129S1SvImJ_G0001008.1 mouse_genomes_project 2 21256571 21258089 + TEC TEC MGP_129S1SvImJ_T0055420.1 MGP_129S1SvImJ_G0025862.1 mouse_genomes_project 2 76378810 76395721 - MGP_129S1SvImJ_P0055420 Pde11a protein_coding protein_coding MGP_129S1SvImJ_T0055421.1 MGP_129S1SvImJ_G0025862.1 mouse_genomes_project 2 76379570 76734188 - MGP_129S1SvImJ_P0055421 Pde11a protein_coding protein_coding MGP_129S1SvImJ_T0055422.1 MGP_129S1SvImJ_G0025862.1 mouse_genomes_project 2 76420861 76619336 - MGP_129S1SvImJ_P0055422 Pde11a protein_coding protein_coding MGP_129S1SvImJ_T0055949.1 MGP_129S1SvImJ_G0026123.1 mouse_genomes_project 2 91355387 91356302 - MGP_129S1SvImJ_P0055949 Olfr1270 protein_coding protein_coding MGP_129S1SvImJ_T0004155.1 MGP_129S1SvImJ_G0003675.1 mouse_genomes_project 2 160429407 160430318 - Gm14257 antisense antisense MGP_129S1SvImJ_T0052586.1 MGP_129S1SvImJ_G0025349.1 mouse_genomes_project 2 9208169 9209153 + MGP_129S1SvImJ_P0052586 Ankrd16 protein_coding protein_coding MGP_129S1SvImJ_T0052587.1 MGP_129S1SvImJ_G0025349.1 mouse_genomes_project 2 9208784 9220613 + MGP_129S1SvImJ_P0052587 Ankrd16 protein_coding protein_coding MGP_129S1SvImJ_T0052588.1 MGP_129S1SvImJ_G0025349.1 mouse_genomes_project 2 9208817 9220617 + Ankrd16 protein_coding retained_intron MGP_129S1SvImJ_T0052589.1 MGP_129S1SvImJ_G0025349.1 mouse_genomes_project 2 9208820 9220591 + Ankrd16 protein_coding retained_intron MGP_129S1SvImJ_T0052590.1 MGP_129S1SvImJ_G0025349.1 mouse_genomes_project 2 9208857 9220613 + MGP_129S1SvImJ_P0052590 Ankrd16 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052591.1 MGP_129S1SvImJ_G0025349.1 mouse_genomes_project 2 9208865 9211558 + Ankrd16 protein_coding retained_intron MGP_129S1SvImJ_T0052592.1 MGP_129S1SvImJ_G0025349.1 mouse_genomes_project 2 9210178 9220056 + MGP_129S1SvImJ_P0052592 Ankrd16 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052593.1 MGP_129S1SvImJ_G0025349.1 mouse_genomes_project 2 9213582 9220608 + Ankrd16 protein_coding retained_intron MGP_129S1SvImJ_T0052594.1 MGP_129S1SvImJ_G0025349.1 mouse_genomes_project 2 9213602 9220202 + Ankrd16 protein_coding retained_intron MGP_129S1SvImJ_T0052595.1 MGP_129S1SvImJ_G0025349.1 mouse_genomes_project 2 9214498 9220589 + Ankrd16 protein_coding retained_intron MGP_129S1SvImJ_T0052596.1 MGP_129S1SvImJ_G0025349.1 mouse_genomes_project 2 9214586 9220584 + MGP_129S1SvImJ_P0052596 Ankrd16 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052597.1 MGP_129S1SvImJ_G0025349.1 mouse_genomes_project 2 9216451 9220410 + Ankrd16 protein_coding retained_intron MGP_129S1SvImJ_T0013797.1 MGP_129S1SvImJ_G0011886.1 mouse_genomes_project 2 144909527 144910012 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058618.1 MGP_129S1SvImJ_G0026747.1 mouse_genomes_project 2 160696509 160783841 - Uqcc1 protein_coding processed_transcript MGP_129S1SvImJ_T0058619.1 MGP_129S1SvImJ_G0026747.1 mouse_genomes_project 2 160696509 160783841 - MGP_129S1SvImJ_P0058619 Uqcc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058620.1 MGP_129S1SvImJ_G0026747.1 mouse_genomes_project 2 160696511 160783817 - MGP_129S1SvImJ_P0058620 Uqcc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058621.1 MGP_129S1SvImJ_G0026747.1 mouse_genomes_project 2 160696511 160783824 - MGP_129S1SvImJ_P0058621 Uqcc1 protein_coding protein_coding MGP_129S1SvImJ_T0058622.1 MGP_129S1SvImJ_G0026747.1 mouse_genomes_project 2 160696536 160784091 - MGP_129S1SvImJ_P0058622 Uqcc1 protein_coding protein_coding MGP_129S1SvImJ_T0058623.1 MGP_129S1SvImJ_G0026747.1 mouse_genomes_project 2 160697562 160783799 - MGP_129S1SvImJ_P0058623 Uqcc1 protein_coding protein_coding MGP_129S1SvImJ_T0058624.1 MGP_129S1SvImJ_G0026747.1 mouse_genomes_project 2 160697799 160701317 - Uqcc1 protein_coding processed_transcript MGP_129S1SvImJ_T0058625.1 MGP_129S1SvImJ_G0026747.1 mouse_genomes_project 2 160697856 160783825 - MGP_129S1SvImJ_P0058625 Uqcc1 protein_coding protein_coding MGP_129S1SvImJ_T0058626.1 MGP_129S1SvImJ_G0026747.1 mouse_genomes_project 2 160697875 160784091 - MGP_129S1SvImJ_P0058626 Uqcc1 protein_coding protein_coding MGP_129S1SvImJ_T0058627.1 MGP_129S1SvImJ_G0026747.1 mouse_genomes_project 2 160698066 160783813 - MGP_129S1SvImJ_P0058627 Uqcc1 protein_coding protein_coding MGP_129S1SvImJ_T0058628.1 MGP_129S1SvImJ_G0026747.1 mouse_genomes_project 2 160700527 160784044 - Uqcc1 protein_coding retained_intron MGP_129S1SvImJ_T0058629.1 MGP_129S1SvImJ_G0026747.1 mouse_genomes_project 2 160700991 160783824 - MGP_129S1SvImJ_P0058629 Uqcc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058630.1 MGP_129S1SvImJ_G0026747.1 mouse_genomes_project 2 160707629 160783831 - Uqcc1 protein_coding retained_intron MGP_129S1SvImJ_T0058631.1 MGP_129S1SvImJ_G0026747.1 mouse_genomes_project 2 160723507 160783837 - Uqcc1 protein_coding processed_transcript MGP_129S1SvImJ_T0058632.1 MGP_129S1SvImJ_G0026747.1 mouse_genomes_project 2 160741147 160783841 - MGP_129S1SvImJ_P0058632 Uqcc1 protein_coding protein_coding MGP_129S1SvImJ_T0058633.1 MGP_129S1SvImJ_G0026747.1 mouse_genomes_project 2 160741159 160765318 - Uqcc1 protein_coding retained_intron MGP_129S1SvImJ_T0058634.1 MGP_129S1SvImJ_G0026747.1 mouse_genomes_project 2 160741166 160784057 - Uqcc1 protein_coding processed_transcript MGP_129S1SvImJ_T0058635.1 MGP_129S1SvImJ_G0026747.1 mouse_genomes_project 2 160762686 160783827 - Uqcc1 protein_coding retained_intron MGP_129S1SvImJ_T0058636.1 MGP_129S1SvImJ_G0026747.1 mouse_genomes_project 2 160764077 160783831 - MGP_129S1SvImJ_P0058636 Uqcc1 protein_coding protein_coding MGP_129S1SvImJ_T0007195.1 MGP_129S1SvImJ_G0005901.1 mouse_genomes_project 2 37172823 37205706 + Gm13589 lincRNA lincRNA MGP_129S1SvImJ_T0013431.1 MGP_129S1SvImJ_G0011520.1 mouse_genomes_project 2 6560592 6561022 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013685.1 MGP_129S1SvImJ_G0011774.1 mouse_genomes_project 2 97253161 97253300 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011534.1 MGP_129S1SvImJ_G0009650.1 mouse_genomes_project 2 134181914 134182283 - Gm24893 misc_RNA misc_RNA MGP_129S1SvImJ_T0053389.1 MGP_129S1SvImJ_G0025492.1 mouse_genomes_project 2 24547674 24608178 + MGP_129S1SvImJ_P0053389 Gm20532 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056986.1 MGP_129S1SvImJ_G0026360.1 mouse_genomes_project 2 122945245 123014403 - MGP_129S1SvImJ_P0056986 Ehd4 protein_coding protein_coding MGP_129S1SvImJ_T0056987.1 MGP_129S1SvImJ_G0026360.1 mouse_genomes_project 2 122958797 122988137 - Ehd4 protein_coding processed_transcript MGP_129S1SvImJ_T0056988.1 MGP_129S1SvImJ_G0026360.1 mouse_genomes_project 2 122958982 122996002 - Ehd4 protein_coding processed_transcript MGP_129S1SvImJ_T0056989.1 MGP_129S1SvImJ_G0026360.1 mouse_genomes_project 2 122980601 123014259 - Ehd4 protein_coding processed_transcript MGP_129S1SvImJ_T0007387.1 MGP_129S1SvImJ_G0006060.1 mouse_genomes_project 2 166564960 166565900 + Gm14241 lincRNA lincRNA MGP_129S1SvImJ_T0057733.1 MGP_129S1SvImJ_G0026518.1 mouse_genomes_project 2 134541070 134544527 - MGP_129S1SvImJ_P0057733 Gfra4 protein_coding protein_coding MGP_129S1SvImJ_T0057734.1 MGP_129S1SvImJ_G0026518.1 mouse_genomes_project 2 134541077 134542896 - Gfra4 protein_coding retained_intron MGP_129S1SvImJ_T0057735.1 MGP_129S1SvImJ_G0026518.1 mouse_genomes_project 2 134541078 134542950 - Gfra4 protein_coding retained_intron MGP_129S1SvImJ_T0057736.1 MGP_129S1SvImJ_G0026518.1 mouse_genomes_project 2 134541614 134544121 - MGP_129S1SvImJ_P0057736 Gfra4 protein_coding protein_coding MGP_129S1SvImJ_T0057737.1 MGP_129S1SvImJ_G0026518.1 mouse_genomes_project 2 134541646 134544121 - MGP_129S1SvImJ_P0057737 Gfra4 protein_coding protein_coding MGP_129S1SvImJ_T0057738.1 MGP_129S1SvImJ_G0026518.1 mouse_genomes_project 2 134541646 134544527 - MGP_129S1SvImJ_P0057738 Gfra4 protein_coding protein_coding MGP_129S1SvImJ_T0057739.1 MGP_129S1SvImJ_G0026518.1 mouse_genomes_project 2 134542670 134544527 - MGP_129S1SvImJ_P0057739 Gfra4 protein_coding protein_coding MGP_129S1SvImJ_T0057740.1 MGP_129S1SvImJ_G0026518.1 mouse_genomes_project 2 134542670 134544121 - MGP_129S1SvImJ_P0057740 Gfra4 protein_coding protein_coding MGP_129S1SvImJ_T0055803.1 MGP_129S1SvImJ_G0026009.1 mouse_genomes_project 2 88501983 88502928 + MGP_129S1SvImJ_P0055803 Olfr1126 protein_coding protein_coding MGP_129S1SvImJ_T0055216.1 MGP_129S1SvImJ_G0025817.1 mouse_genomes_project 2 71039309 71130383 - MGP_129S1SvImJ_P0055216 Mettl8 protein_coding protein_coding MGP_129S1SvImJ_T0055217.1 MGP_129S1SvImJ_G0025817.1 mouse_genomes_project 2 71039316 71130405 - MGP_129S1SvImJ_P0055217 Mettl8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055218.1 MGP_129S1SvImJ_G0025817.1 mouse_genomes_project 2 71039316 71130405 - MGP_129S1SvImJ_P0055218 Mettl8 protein_coding protein_coding MGP_129S1SvImJ_T0055219.1 MGP_129S1SvImJ_G0025817.1 mouse_genomes_project 2 71039316 71130405 - MGP_129S1SvImJ_P0055219 Mettl8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055220.1 MGP_129S1SvImJ_G0025817.1 mouse_genomes_project 2 71040920 71048145 - MGP_129S1SvImJ_P0055220 Mettl8 protein_coding protein_coding MGP_129S1SvImJ_T0055221.1 MGP_129S1SvImJ_G0025817.1 mouse_genomes_project 2 71041238 71056501 - MGP_129S1SvImJ_P0055221 Mettl8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055222.1 MGP_129S1SvImJ_G0025817.1 mouse_genomes_project 2 71041805 71051044 - Mettl8 protein_coding retained_intron MGP_129S1SvImJ_T0055223.1 MGP_129S1SvImJ_G0025817.1 mouse_genomes_project 2 71053308 71130394 - MGP_129S1SvImJ_P0055223 Mettl8 protein_coding protein_coding MGP_129S1SvImJ_T0055224.1 MGP_129S1SvImJ_G0025817.1 mouse_genomes_project 2 71055376 71130405 - Mettl8 protein_coding retained_intron MGP_129S1SvImJ_T0055225.1 MGP_129S1SvImJ_G0025817.1 mouse_genomes_project 2 71067539 71092362 - Mettl8 protein_coding retained_intron MGP_129S1SvImJ_T0058811.1 MGP_129S1SvImJ_G0026772.1 mouse_genomes_project 2 161878478 161959870 - MGP_129S1SvImJ_P0058811 Ndrg3 protein_coding protein_coding MGP_129S1SvImJ_T0058812.1 MGP_129S1SvImJ_G0026772.1 mouse_genomes_project 2 161878478 161959883 - MGP_129S1SvImJ_P0058812 Ndrg3 protein_coding protein_coding MGP_129S1SvImJ_T0058813.1 MGP_129S1SvImJ_G0026772.1 mouse_genomes_project 2 161879536 161907982 - Ndrg3 protein_coding processed_transcript MGP_129S1SvImJ_T0058814.1 MGP_129S1SvImJ_G0026772.1 mouse_genomes_project 2 161882285 161887676 - Ndrg3 protein_coding processed_transcript MGP_129S1SvImJ_T0058815.1 MGP_129S1SvImJ_G0026772.1 mouse_genomes_project 2 161886968 161959862 - MGP_129S1SvImJ_P0058815 Ndrg3 protein_coding protein_coding MGP_129S1SvImJ_T0058816.1 MGP_129S1SvImJ_G0026772.1 mouse_genomes_project 2 161891303 161917365 - Ndrg3 protein_coding processed_transcript MGP_129S1SvImJ_T0058817.1 MGP_129S1SvImJ_G0026772.1 mouse_genomes_project 2 161909926 161959827 - Ndrg3 protein_coding processed_transcript MGP_129S1SvImJ_T0058818.1 MGP_129S1SvImJ_G0026772.1 mouse_genomes_project 2 161912234 161959754 - Ndrg3 protein_coding processed_transcript MGP_129S1SvImJ_T0058819.1 MGP_129S1SvImJ_G0026772.1 mouse_genomes_project 2 161920328 161959874 - Ndrg3 protein_coding retained_intron MGP_129S1SvImJ_T0058820.1 MGP_129S1SvImJ_G0026772.1 mouse_genomes_project 2 161934249 161959823 - Ndrg3 protein_coding processed_transcript MGP_129S1SvImJ_T0100959.1 MGP_129S1SvImJ_G0039026.1 mouse_genomes_project 2 106698371 106698503 + Gm22439 snoRNA snoRNA MGP_129S1SvImJ_T0056141.1 MGP_129S1SvImJ_G0026153.1 mouse_genomes_project 2 92993210 92999363 - MGP_129S1SvImJ_P0056141 Zfp408 protein_coding protein_coding MGP_129S1SvImJ_T0056142.1 MGP_129S1SvImJ_G0026153.1 mouse_genomes_project 2 92993229 92999375 - MGP_129S1SvImJ_P0056142 Zfp408 protein_coding protein_coding MGP_129S1SvImJ_T0056143.1 MGP_129S1SvImJ_G0026153.1 mouse_genomes_project 2 92995819 92997777 - Zfp408 protein_coding retained_intron MGP_129S1SvImJ_T0056144.1 MGP_129S1SvImJ_G0026153.1 mouse_genomes_project 2 92997209 92999343 - MGP_129S1SvImJ_P0056144 Zfp408 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056145.1 MGP_129S1SvImJ_G0026153.1 mouse_genomes_project 2 92997557 92999327 - Zfp408 protein_coding processed_transcript MGP_129S1SvImJ_T0056146.1 MGP_129S1SvImJ_G0026153.1 mouse_genomes_project 2 92998519 92999344 - Zfp408 protein_coding processed_transcript MGP_129S1SvImJ_T0007226.1 MGP_129S1SvImJ_G0005929.1 mouse_genomes_project 2 71875640 71889171 + Platr26 lincRNA lincRNA MGP_129S1SvImJ_T0053181.1 MGP_129S1SvImJ_G0025450.1 mouse_genomes_project 2 23381071 23384138 - MGP_129S1SvImJ_P0053181 Lcn12 protein_coding protein_coding MGP_129S1SvImJ_T0053182.1 MGP_129S1SvImJ_G0025450.1 mouse_genomes_project 2 23381073 23383659 - MGP_129S1SvImJ_P0053182 Lcn12 protein_coding protein_coding MGP_129S1SvImJ_T0007252.1 MGP_129S1SvImJ_G0005950.1 mouse_genomes_project 2 77744943 77747020 + Gm13943 lincRNA lincRNA MGP_129S1SvImJ_T0054495.1 MGP_129S1SvImJ_G0025679.1 mouse_genomes_project 2 35570484 35571420 - MGP_129S1SvImJ_P0054495 Olfr353 protein_coding protein_coding MGP_129S1SvImJ_T0013498.1 MGP_129S1SvImJ_G0011587.1 mouse_genomes_project 2 34132438 34132960 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055062.1 MGP_129S1SvImJ_G0025783.1 mouse_genomes_project 2 66029382 66105031 - MGP_129S1SvImJ_P0055062 Ttc21b protein_coding protein_coding MGP_129S1SvImJ_T0055063.1 MGP_129S1SvImJ_G0025783.1 mouse_genomes_project 2 66066069 66083148 - Ttc21b protein_coding retained_intron MGP_129S1SvImJ_T0055064.1 MGP_129S1SvImJ_G0025783.1 mouse_genomes_project 2 66079129 66097913 - Ttc21b protein_coding retained_intron MGP_129S1SvImJ_T0001068.1 MGP_129S1SvImJ_G0000997.1 mouse_genomes_project 2 11541666 11544265 - TEC TEC MGP_129S1SvImJ_T0052906.1 MGP_129S1SvImJ_G0025408.1 mouse_genomes_project 2 22136601 22152805 + MGP_129S1SvImJ_P0052906 Il1rn protein_coding protein_coding MGP_129S1SvImJ_T0052907.1 MGP_129S1SvImJ_G0025408.1 mouse_genomes_project 2 22136604 22139158 + Il1rn protein_coding retained_intron MGP_129S1SvImJ_T0052908.1 MGP_129S1SvImJ_G0025408.1 mouse_genomes_project 2 22136604 22150768 + MGP_129S1SvImJ_P0052908 Il1rn protein_coding protein_coding MGP_129S1SvImJ_T0052909.1 MGP_129S1SvImJ_G0025408.1 mouse_genomes_project 2 22146598 22151118 + MGP_129S1SvImJ_P0052909 Il1rn protein_coding protein_coding MGP_129S1SvImJ_T0052910.1 MGP_129S1SvImJ_G0025408.1 mouse_genomes_project 2 22146620 22152247 + MGP_129S1SvImJ_P0052910 Il1rn protein_coding protein_coding MGP_129S1SvImJ_T0052911.1 MGP_129S1SvImJ_G0025408.1 mouse_genomes_project 2 22146658 22147665 + Il1rn protein_coding processed_transcript MGP_129S1SvImJ_T0010353.1 MGP_129S1SvImJ_G0008469.1 mouse_genomes_project 2 7823566 7823687 + Mir669f miRNA miRNA MGP_129S1SvImJ_T0058003.1 MGP_129S1SvImJ_G0026578.1 mouse_genomes_project 2 147964796 147994245 + MGP_129S1SvImJ_P0058003 Dstn protein_coding protein_coding MGP_129S1SvImJ_T0100997.1 MGP_129S1SvImJ_G0039064.1 mouse_genomes_project 2 170101614 170101745 + Gm24473 snoRNA snoRNA MGP_129S1SvImJ_T0004082.1 MGP_129S1SvImJ_G0003619.1 mouse_genomes_project 2 119447881 119478791 - Gm13990 antisense antisense MGP_129S1SvImJ_T0054390.1 MGP_129S1SvImJ_G0025649.1 mouse_genomes_project 2 33730815 33755882 + MGP_129S1SvImJ_P0054390 Cntrl protein_coding protein_coding MGP_129S1SvImJ_T0054391.1 MGP_129S1SvImJ_G0025649.1 mouse_genomes_project 2 33730815 33807397 + MGP_129S1SvImJ_P0054391 Cntrl protein_coding protein_coding MGP_129S1SvImJ_T0054392.1 MGP_129S1SvImJ_G0025649.1 mouse_genomes_project 2 33730815 33808109 + MGP_129S1SvImJ_P0054392 Cntrl protein_coding protein_coding MGP_129S1SvImJ_T0054393.1 MGP_129S1SvImJ_G0025649.1 mouse_genomes_project 2 33730942 33807709 + MGP_129S1SvImJ_P0054393 Cntrl protein_coding protein_coding MGP_129S1SvImJ_T0054394.1 MGP_129S1SvImJ_G0025649.1 mouse_genomes_project 2 33752593 33775992 + MGP_129S1SvImJ_P0054394 Cntrl protein_coding protein_coding MGP_129S1SvImJ_T0054395.1 MGP_129S1SvImJ_G0025649.1 mouse_genomes_project 2 33757388 33788957 + MGP_129S1SvImJ_P0054395 Cntrl protein_coding protein_coding MGP_129S1SvImJ_T0054396.1 MGP_129S1SvImJ_G0025649.1 mouse_genomes_project 2 33757388 33808109 + MGP_129S1SvImJ_P0054396 Cntrl protein_coding protein_coding MGP_129S1SvImJ_T0054397.1 MGP_129S1SvImJ_G0025649.1 mouse_genomes_project 2 33757412 33762836 + MGP_129S1SvImJ_P0054397 Cntrl protein_coding protein_coding MGP_129S1SvImJ_T0054398.1 MGP_129S1SvImJ_G0025649.1 mouse_genomes_project 2 33757412 33775992 + MGP_129S1SvImJ_P0054398 Cntrl protein_coding protein_coding MGP_129S1SvImJ_T0054399.1 MGP_129S1SvImJ_G0025649.1 mouse_genomes_project 2 33773416 33775992 + MGP_129S1SvImJ_P0054399 Cntrl protein_coding protein_coding MGP_129S1SvImJ_T0054400.1 MGP_129S1SvImJ_G0025649.1 mouse_genomes_project 2 33788628 33795086 + MGP_129S1SvImJ_P0054400 Cntrl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054401.1 MGP_129S1SvImJ_G0025649.1 mouse_genomes_project 2 33790117 33795514 + Cntrl protein_coding retained_intron MGP_129S1SvImJ_T0054402.1 MGP_129S1SvImJ_G0025649.1 mouse_genomes_project 2 33804534 33808098 + Cntrl protein_coding retained_intron MGP_129S1SvImJ_T0010436.1 MGP_129S1SvImJ_G0008552.1 mouse_genomes_project 2 73183013 73183138 - Gm25960 miRNA miRNA MGP_129S1SvImJ_T0058159.1 MGP_129S1SvImJ_G0026620.1 mouse_genomes_project 2 153243503 153247358 - MGP_129S1SvImJ_P0058159 Cst3 protein_coding protein_coding MGP_129S1SvImJ_T0058160.1 MGP_129S1SvImJ_G0026620.1 mouse_genomes_project 2 153244253 153247233 - Cst3 protein_coding processed_transcript MGP_129S1SvImJ_T0058161.1 MGP_129S1SvImJ_G0026620.1 mouse_genomes_project 2 153244629 153247474 - MGP_129S1SvImJ_P0058161 Cst3 protein_coding protein_coding MGP_129S1SvImJ_T0055435.1 MGP_129S1SvImJ_G0025867.1 mouse_genomes_project 2 77043243 77046193 + MGP_129S1SvImJ_P0055435 Dfnb59 protein_coding protein_coding MGP_129S1SvImJ_T0055436.1 MGP_129S1SvImJ_G0025867.1 mouse_genomes_project 2 77043266 77050586 + MGP_129S1SvImJ_P0055436 Dfnb59 protein_coding protein_coding MGP_129S1SvImJ_T0055437.1 MGP_129S1SvImJ_G0025867.1 mouse_genomes_project 2 77045040 77053351 + MGP_129S1SvImJ_P0055437 Dfnb59 protein_coding protein_coding MGP_129S1SvImJ_T0007260.1 MGP_129S1SvImJ_G0005956.1 mouse_genomes_project 2 83767955 83795465 - Gm28675 lincRNA lincRNA MGP_129S1SvImJ_T0053594.1 MGP_129S1SvImJ_G0025533.1 mouse_genomes_project 2 26926156 26933255 + Ddx31 protein_coding processed_transcript MGP_129S1SvImJ_T0053595.1 MGP_129S1SvImJ_G0025533.1 mouse_genomes_project 2 26926209 26993413 + MGP_129S1SvImJ_P0053595 Ddx31 protein_coding protein_coding MGP_129S1SvImJ_T0053596.1 MGP_129S1SvImJ_G0025533.1 mouse_genomes_project 2 26930645 26941959 + Ddx31 protein_coding processed_transcript MGP_129S1SvImJ_T0053597.1 MGP_129S1SvImJ_G0025533.1 mouse_genomes_project 2 26942868 26945804 + Ddx31 protein_coding processed_transcript MGP_129S1SvImJ_T0057122.1 MGP_129S1SvImJ_G0026379.1 mouse_genomes_project 2 123923956 123967861 - MGP_129S1SvImJ_P0057122 Tgm5 protein_coding protein_coding MGP_129S1SvImJ_T0057123.1 MGP_129S1SvImJ_G0026379.1 mouse_genomes_project 2 123952502 123967842 - Tgm5 protein_coding retained_intron MGP_129S1SvImJ_T0007204.1 MGP_129S1SvImJ_G0005909.1 mouse_genomes_project 2 49005772 49012752 - Gm13480 lincRNA lincRNA MGP_129S1SvImJ_T0100986.1 MGP_129S1SvImJ_G0039053.1 mouse_genomes_project 2 155909536 155909672 - snoRNA snoRNA MGP_129S1SvImJ_T0053783.1 MGP_129S1SvImJ_G0025561.1 mouse_genomes_project 2 28484476 28500506 + MGP_129S1SvImJ_P0053783 Phyhd1 protein_coding protein_coding MGP_129S1SvImJ_T0053784.1 MGP_129S1SvImJ_G0025561.1 mouse_genomes_project 2 28484802 28500507 + MGP_129S1SvImJ_P0053784 Phyhd1 protein_coding protein_coding MGP_129S1SvImJ_T0053785.1 MGP_129S1SvImJ_G0025561.1 mouse_genomes_project 2 28484994 28500506 + MGP_129S1SvImJ_P0053785 Phyhd1 protein_coding protein_coding MGP_129S1SvImJ_T0053786.1 MGP_129S1SvImJ_G0025561.1 mouse_genomes_project 2 28485008 28499419 + MGP_129S1SvImJ_P0053786 Phyhd1 protein_coding protein_coding MGP_129S1SvImJ_T0053787.1 MGP_129S1SvImJ_G0025561.1 mouse_genomes_project 2 28485092 28498598 + MGP_129S1SvImJ_P0053787 Phyhd1 protein_coding protein_coding MGP_129S1SvImJ_T0053788.1 MGP_129S1SvImJ_G0025561.1 mouse_genomes_project 2 28485122 28500495 + MGP_129S1SvImJ_P0053788 Phyhd1 protein_coding protein_coding MGP_129S1SvImJ_T0053789.1 MGP_129S1SvImJ_G0025561.1 mouse_genomes_project 2 28485124 28497879 + Phyhd1 protein_coding processed_transcript MGP_129S1SvImJ_T0053790.1 MGP_129S1SvImJ_G0025561.1 mouse_genomes_project 2 28485129 28499467 + MGP_129S1SvImJ_P0053790 Phyhd1 protein_coding protein_coding MGP_129S1SvImJ_T0053791.1 MGP_129S1SvImJ_G0025561.1 mouse_genomes_project 2 28485136 28500456 + MGP_129S1SvImJ_P0053791 Phyhd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053792.1 MGP_129S1SvImJ_G0025561.1 mouse_genomes_project 2 28485136 28500456 + MGP_129S1SvImJ_P0053792 Phyhd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053793.1 MGP_129S1SvImJ_G0025561.1 mouse_genomes_project 2 28495359 28500498 + MGP_129S1SvImJ_P0053793 Phyhd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053794.1 MGP_129S1SvImJ_G0025561.1 mouse_genomes_project 2 28497983 28500212 + Phyhd1 protein_coding retained_intron MGP_129S1SvImJ_T0053795.1 MGP_129S1SvImJ_G0025561.1 mouse_genomes_project 2 28498030 28498863 + Phyhd1 protein_coding retained_intron MGP_129S1SvImJ_T0052808.1 MGP_129S1SvImJ_G0025386.1 mouse_genomes_project 2 18629876 18757987 - MGP_129S1SvImJ_P0052808 Arhgap21 protein_coding protein_coding MGP_129S1SvImJ_T0052809.1 MGP_129S1SvImJ_G0025386.1 mouse_genomes_project 2 18629876 18756827 - MGP_129S1SvImJ_P0052809 Arhgap21 protein_coding protein_coding MGP_129S1SvImJ_T0052810.1 MGP_129S1SvImJ_G0025386.1 mouse_genomes_project 2 18629897 18756826 - MGP_129S1SvImJ_P0052810 Arhgap21 protein_coding protein_coding MGP_129S1SvImJ_T0052811.1 MGP_129S1SvImJ_G0025386.1 mouse_genomes_project 2 18630551 18757632 - MGP_129S1SvImJ_P0052811 Arhgap21 protein_coding protein_coding MGP_129S1SvImJ_T0052812.1 MGP_129S1SvImJ_G0025386.1 mouse_genomes_project 2 18631909 18635205 - Arhgap21 protein_coding retained_intron MGP_129S1SvImJ_T0052813.1 MGP_129S1SvImJ_G0025386.1 mouse_genomes_project 2 18632000 18667347 - MGP_129S1SvImJ_P0052813 Arhgap21 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052814.1 MGP_129S1SvImJ_G0025386.1 mouse_genomes_project 2 18632201 18641846 - Arhgap21 protein_coding retained_intron MGP_129S1SvImJ_T0052815.1 MGP_129S1SvImJ_G0025386.1 mouse_genomes_project 2 18632337 18636589 - Arhgap21 protein_coding retained_intron MGP_129S1SvImJ_T0052816.1 MGP_129S1SvImJ_G0025386.1 mouse_genomes_project 2 18634998 18637663 - Arhgap21 protein_coding processed_transcript MGP_129S1SvImJ_T0052817.1 MGP_129S1SvImJ_G0025386.1 mouse_genomes_project 2 18634999 18641839 - Arhgap21 protein_coding processed_transcript MGP_129S1SvImJ_T0052818.1 MGP_129S1SvImJ_G0025386.1 mouse_genomes_project 2 18640872 18654719 - MGP_129S1SvImJ_P0052818 Arhgap21 protein_coding protein_coding MGP_129S1SvImJ_T0052819.1 MGP_129S1SvImJ_G0025386.1 mouse_genomes_project 2 18641386 18643060 - Arhgap21 protein_coding retained_intron MGP_129S1SvImJ_T0052820.1 MGP_129S1SvImJ_G0025386.1 mouse_genomes_project 2 18670475 18700343 - Arhgap21 protein_coding processed_transcript MGP_129S1SvImJ_T0052821.1 MGP_129S1SvImJ_G0025386.1 mouse_genomes_project 2 18674017 18728963 - MGP_129S1SvImJ_P0052821 Arhgap21 protein_coding protein_coding MGP_129S1SvImJ_T0052822.1 MGP_129S1SvImJ_G0025386.1 mouse_genomes_project 2 18700448 18757731 - MGP_129S1SvImJ_P0052822 Arhgap21 protein_coding protein_coding MGP_129S1SvImJ_T0052823.1 MGP_129S1SvImJ_G0025386.1 mouse_genomes_project 2 18756703 18757590 - Arhgap21 protein_coding processed_transcript MGP_129S1SvImJ_T0052824.1 MGP_129S1SvImJ_G0025386.1 mouse_genomes_project 2 18756728 18757938 - Arhgap21 protein_coding processed_transcript MGP_129S1SvImJ_T0052825.1 MGP_129S1SvImJ_G0025386.1 mouse_genomes_project 2 18756795 18757986 - Arhgap21 protein_coding processed_transcript MGP_129S1SvImJ_T0057728.1 MGP_129S1SvImJ_G0026517.1 mouse_genomes_project 2 134398655 134529787 + MGP_129S1SvImJ_P0057728 Atrn protein_coding protein_coding MGP_129S1SvImJ_T0057729.1 MGP_129S1SvImJ_G0026517.1 mouse_genomes_project 2 134398661 134503598 + Atrn protein_coding retained_intron MGP_129S1SvImJ_T0057730.1 MGP_129S1SvImJ_G0026517.1 mouse_genomes_project 2 134399091 134427866 + Atrn protein_coding retained_intron MGP_129S1SvImJ_T0057731.1 MGP_129S1SvImJ_G0026517.1 mouse_genomes_project 2 134475864 134488807 + Atrn protein_coding retained_intron MGP_129S1SvImJ_T0057732.1 MGP_129S1SvImJ_G0026517.1 mouse_genomes_project 2 134490400 134503626 + Atrn protein_coding retained_intron MGP_129S1SvImJ_T0010500.1 MGP_129S1SvImJ_G0008616.1 mouse_genomes_project 2 180005019 180005138 - Mir6340 miRNA miRNA MGP_129S1SvImJ_T0056514.1 MGP_129S1SvImJ_G0026223.1 mouse_genomes_project 2 106959572 106978354 - MGP_129S1SvImJ_P0056514 Prrg4 protein_coding protein_coding MGP_129S1SvImJ_T0056515.1 MGP_129S1SvImJ_G0026223.1 mouse_genomes_project 2 106968072 106977971 - MGP_129S1SvImJ_P0056515 Prrg4 protein_coding protein_coding MGP_129S1SvImJ_T0007253.1 MGP_129S1SvImJ_G0005951.1 mouse_genomes_project 2 78303883 78306199 + Gm13661 lincRNA lincRNA MGP_129S1SvImJ_T0058173.1 MGP_129S1SvImJ_G0026625.1 mouse_genomes_project 2 154512665 154539463 - MGP_129S1SvImJ_P0058173 Zfp120 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058174.1 MGP_129S1SvImJ_G0026625.1 mouse_genomes_project 2 154512665 154539493 - MGP_129S1SvImJ_P0058174 Zfp120 protein_coding protein_coding MGP_129S1SvImJ_T0058175.1 MGP_129S1SvImJ_G0026625.1 mouse_genomes_project 2 154512665 154539463 - MGP_129S1SvImJ_P0058175 Zfp120 protein_coding protein_coding MGP_129S1SvImJ_T0058176.1 MGP_129S1SvImJ_G0026625.1 mouse_genomes_project 2 154517481 154539441 - Zfp120 protein_coding processed_transcript MGP_129S1SvImJ_T0055245.1 MGP_129S1SvImJ_G0025821.1 mouse_genomes_project 2 71360871 71462669 - MGP_129S1SvImJ_P0055245 Slc25a12 protein_coding protein_coding MGP_129S1SvImJ_T0055246.1 MGP_129S1SvImJ_G0025821.1 mouse_genomes_project 2 71364547 71462453 - MGP_129S1SvImJ_P0055246 Slc25a12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055247.1 MGP_129S1SvImJ_G0025821.1 mouse_genomes_project 2 71364934 71385630 - Slc25a12 protein_coding processed_transcript MGP_129S1SvImJ_T0055248.1 MGP_129S1SvImJ_G0025821.1 mouse_genomes_project 2 71369446 71372696 - Slc25a12 protein_coding retained_intron MGP_129S1SvImJ_T0055249.1 MGP_129S1SvImJ_G0025821.1 mouse_genomes_project 2 71403082 71421882 - Slc25a12 protein_coding processed_transcript MGP_129S1SvImJ_T0055250.1 MGP_129S1SvImJ_G0025821.1 mouse_genomes_project 2 71422781 71438231 - Slc25a12 protein_coding processed_transcript MGP_129S1SvImJ_T0055251.1 MGP_129S1SvImJ_G0025821.1 mouse_genomes_project 2 71438088 71442011 - Slc25a12 protein_coding processed_transcript MGP_129S1SvImJ_T0058808.1 MGP_129S1SvImJ_G0026771.1 mouse_genomes_project 2 161819245 161833614 - MGP_129S1SvImJ_P0058808 Sla2 protein_coding protein_coding MGP_129S1SvImJ_T0058810.1 MGP_129S1SvImJ_G0026771.1 mouse_genomes_project 2 161819710 161833728 - MGP_129S1SvImJ_P0058810 Sla2 protein_coding protein_coding MGP_129S1SvImJ_T0056995.1 MGP_129S1SvImJ_G0026363.1 mouse_genomes_project 2 123161399 123173794 - Pla2g4f protein_coding retained_intron MGP_129S1SvImJ_T0056996.1 MGP_129S1SvImJ_G0026363.1 mouse_genomes_project 2 123161408 123175595 - MGP_129S1SvImJ_P0056996 Pla2g4f protein_coding protein_coding MGP_129S1SvImJ_T0052778.1 MGP_129S1SvImJ_G0025380.1 mouse_genomes_project 2 16931480 17046327 + MGP_129S1SvImJ_P0052778 Armc3 protein_coding protein_coding MGP_129S1SvImJ_T0052779.1 MGP_129S1SvImJ_G0025380.1 mouse_genomes_project 2 16931480 17046327 + MGP_129S1SvImJ_P0052779 Armc3 protein_coding protein_coding MGP_129S1SvImJ_T0007201.1 MGP_129S1SvImJ_G0005906.1 mouse_genomes_project 2 44855301 44859160 - Gm13467 lincRNA lincRNA MGP_129S1SvImJ_T0055960.1 MGP_129S1SvImJ_G0026130.1 mouse_genomes_project 2 91947217 92007785 + MGP_129S1SvImJ_P0055960 Nup160 protein_coding protein_coding MGP_129S1SvImJ_T0055961.1 MGP_129S1SvImJ_G0026130.1 mouse_genomes_project 2 91955159 91962977 + Nup160 protein_coding processed_transcript MGP_129S1SvImJ_T0055962.1 MGP_129S1SvImJ_G0026130.1 mouse_genomes_project 2 91959561 91964696 + Nup160 protein_coding processed_transcript MGP_129S1SvImJ_T0055963.1 MGP_129S1SvImJ_G0026130.1 mouse_genomes_project 2 91960549 91972913 + Nup160 protein_coding processed_transcript MGP_129S1SvImJ_T0055964.1 MGP_129S1SvImJ_G0026130.1 mouse_genomes_project 2 91970197 91972525 + Nup160 protein_coding processed_transcript MGP_129S1SvImJ_T0055965.1 MGP_129S1SvImJ_G0026130.1 mouse_genomes_project 2 91988323 91988676 + Nup160 protein_coding processed_transcript MGP_129S1SvImJ_T0055966.1 MGP_129S1SvImJ_G0026130.1 mouse_genomes_project 2 92004180 92007241 + Nup160 protein_coding processed_transcript MGP_129S1SvImJ_T0055669.1 MGP_129S1SvImJ_G0025913.1 mouse_genomes_project 2 85526919 85530151 + MGP_129S1SvImJ_P0055669 Timm10 protein_coding protein_coding MGP_129S1SvImJ_T0055670.1 MGP_129S1SvImJ_G0025913.1 mouse_genomes_project 2 85527306 85530051 + MGP_129S1SvImJ_P0055670 Timm10 protein_coding protein_coding MGP_129S1SvImJ_T0055724.1 MGP_129S1SvImJ_G0025933.1 mouse_genomes_project 2 86465730 86466672 + MGP_129S1SvImJ_P0055724 Olfr1008 protein_coding protein_coding MGP_129S1SvImJ_T0013696.1 MGP_129S1SvImJ_G0011785.1 mouse_genomes_project 2 102162385 102163172 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058493.1 MGP_129S1SvImJ_G0026719.1 mouse_genomes_project 2 159314866 159329909 - MGP_129S1SvImJ_P0058493 E2f1 protein_coding protein_coding MGP_129S1SvImJ_T0058494.1 MGP_129S1SvImJ_G0026719.1 mouse_genomes_project 2 159315093 159329737 - MGP_129S1SvImJ_P0058494 E2f1 protein_coding protein_coding MGP_129S1SvImJ_T0057507.1 MGP_129S1SvImJ_G0026462.1 mouse_genomes_project 2 130819188 130834141 - MGP_129S1SvImJ_P0057507 Prom2 protein_coding protein_coding MGP_129S1SvImJ_T0057508.1 MGP_129S1SvImJ_G0026462.1 mouse_genomes_project 2 130819670 130834059 - MGP_129S1SvImJ_P0057508 Prom2 protein_coding protein_coding MGP_129S1SvImJ_T0057509.1 MGP_129S1SvImJ_G0026462.1 mouse_genomes_project 2 130827439 130827871 - Prom2 protein_coding processed_transcript MGP_129S1SvImJ_T0057510.1 MGP_129S1SvImJ_G0026462.1 mouse_genomes_project 2 130832912 130834088 - Prom2 protein_coding retained_intron MGP_129S1SvImJ_T0056316.1 MGP_129S1SvImJ_G0026181.1 mouse_genomes_project 2 95477180 95478420 - MGP_129S1SvImJ_P0056316 protein_coding protein_coding MGP_129S1SvImJ_T0056317.1 MGP_129S1SvImJ_G0026181.1 mouse_genomes_project 2 95477186 95478572 - MGP_129S1SvImJ_P0056317 protein_coding protein_coding MGP_129S1SvImJ_T0013892.1 MGP_129S1SvImJ_G0011981.1 mouse_genomes_project 2 180316752 180316962 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098861.1 MGP_129S1SvImJ_G0036940.1 mouse_genomes_project 2 132902593 132920847 - Gm14040 sense_intronic sense_intronic MGP_129S1SvImJ_T0004086.1 MGP_129S1SvImJ_G0003623.1 mouse_genomes_project 2 121722842 121726475 + Gm14089 antisense antisense MGP_129S1SvImJ_T0058501.1 MGP_129S1SvImJ_G0026723.1 mouse_genomes_project 2 159418868 159466217 + Chmp4b protein_coding processed_transcript MGP_129S1SvImJ_T0058502.1 MGP_129S1SvImJ_G0026723.1 mouse_genomes_project 2 159425412 159466222 + MGP_129S1SvImJ_P0058502 Chmp4b protein_coding protein_coding MGP_129S1SvImJ_T0058503.1 MGP_129S1SvImJ_G0026723.1 mouse_genomes_project 2 159460883 159465718 + Chmp4b protein_coding retained_intron MGP_129S1SvImJ_T0007290.1 MGP_129S1SvImJ_G0005979.1 mouse_genomes_project 2 105925948 105934541 + Gm13881 lincRNA lincRNA MGP_129S1SvImJ_T0013900.1 MGP_129S1SvImJ_G0011989.1 mouse_genomes_project 2 185699298 185699885 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100993.1 MGP_129S1SvImJ_G0039060.1 mouse_genomes_project 2 163453259 163453392 + Gm25129 snoRNA snoRNA MGP_129S1SvImJ_T0013887.1 MGP_129S1SvImJ_G0011976.1 mouse_genomes_project 2 176317333 176318179 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054505.1 MGP_129S1SvImJ_G0025688.1 mouse_genomes_project 2 35872298 35874671 + MGP_129S1SvImJ_P0054505 Olfr365 protein_coding protein_coding MGP_129S1SvImJ_T0013692.1 MGP_129S1SvImJ_G0011781.1 mouse_genomes_project 2 100302359 100302684 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013819.1 MGP_129S1SvImJ_G0011908.1 mouse_genomes_project 2 151557680 151558162 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055944.1 MGP_129S1SvImJ_G0026119.1 mouse_genomes_project 2 91222426 91223353 - MGP_129S1SvImJ_P0055944 Olfr1264 protein_coding protein_coding MGP_129S1SvImJ_T0013551.1 MGP_129S1SvImJ_G0011640.1 mouse_genomes_project 2 52957894 52958340 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010470.1 MGP_129S1SvImJ_G0008586.1 mouse_genomes_project 2 130141766 130141902 - Mir3473g miRNA miRNA MGP_129S1SvImJ_T0007397.1 MGP_129S1SvImJ_G0006070.1 mouse_genomes_project 2 171845258 171846656 - Gm11467 lincRNA lincRNA MGP_129S1SvImJ_T0055261.1 MGP_129S1SvImJ_G0025824.1 mouse_genomes_project 2 71646382 71652250 + MGP_129S1SvImJ_P0055261 Dlx1 protein_coding protein_coding MGP_129S1SvImJ_T0055262.1 MGP_129S1SvImJ_G0025824.1 mouse_genomes_project 2 71646952 71648335 + MGP_129S1SvImJ_P0055262 Dlx1 protein_coding protein_coding MGP_129S1SvImJ_T0055263.1 MGP_129S1SvImJ_G0025824.1 mouse_genomes_project 2 71647370 71648501 + MGP_129S1SvImJ_P0055263 Dlx1 protein_coding protein_coding MGP_129S1SvImJ_T0055264.1 MGP_129S1SvImJ_G0025824.1 mouse_genomes_project 2 71648122 71650789 + MGP_129S1SvImJ_P0055264 Dlx1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055265.1 MGP_129S1SvImJ_G0025824.1 mouse_genomes_project 2 71648216 71652251 + Dlx1 protein_coding retained_intron MGP_129S1SvImJ_T0055266.1 MGP_129S1SvImJ_G0025824.1 mouse_genomes_project 2 71649049 71650959 + Dlx1 protein_coding retained_intron MGP_129S1SvImJ_T0102382.1 MGP_129S1SvImJ_G0040216.1 mouse_genomes_project 2 33452429 33453194 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0004004.1 MGP_129S1SvImJ_G0003570.1 mouse_genomes_project 2 65028753 65029673 + Gm13594 antisense antisense MGP_129S1SvImJ_T0017886.1 MGP_129S1SvImJ_G0015464.1 mouse_genomes_project 2 125744412 125760535 + 4930417H01Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017887.1 MGP_129S1SvImJ_G0015464.1 mouse_genomes_project 2 125745552 125763011 + 4930417H01Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017888.1 MGP_129S1SvImJ_G0015464.1 mouse_genomes_project 2 125745552 125760535 + 4930417H01Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017889.1 MGP_129S1SvImJ_G0015464.1 mouse_genomes_project 2 125746850 125763012 + 4930417H01Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017890.1 MGP_129S1SvImJ_G0015464.1 mouse_genomes_project 2 125746852 125760646 + 4930417H01Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017891.1 MGP_129S1SvImJ_G0015464.1 mouse_genomes_project 2 125750657 125763871 + 4930417H01Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0013637.1 MGP_129S1SvImJ_G0011726.1 mouse_genomes_project 2 82760444 82761039 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100915.1 MGP_129S1SvImJ_G0038982.1 mouse_genomes_project 2 17445761 17445893 + Gm24670 snoRNA snoRNA MGP_129S1SvImJ_T0013795.1 MGP_129S1SvImJ_G0011884.1 mouse_genomes_project 2 143994886 143995324 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007140.1 MGP_129S1SvImJ_G0005861.1 mouse_genomes_project 2 4927729 4991318 - Gm13211 lincRNA lincRNA MGP_129S1SvImJ_T0102413.1 MGP_129S1SvImJ_G0040247.1 mouse_genomes_project 2 87510606 87511551 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0004058.1 MGP_129S1SvImJ_G0003607.1 mouse_genomes_project 2 104666544 104676441 - Gm13872 antisense antisense MGP_129S1SvImJ_T0004059.1 MGP_129S1SvImJ_G0003607.1 mouse_genomes_project 2 104672288 104676428 - Gm13872 antisense antisense MGP_129S1SvImJ_T0004060.1 MGP_129S1SvImJ_G0003607.1 mouse_genomes_project 2 104673275 104676442 - Gm13872 antisense antisense MGP_129S1SvImJ_T0057413.1 MGP_129S1SvImJ_G0026442.1 mouse_genomes_project 2 129850833 129902205 - MGP_129S1SvImJ_P0057413 Gabpb1 protein_coding protein_coding MGP_129S1SvImJ_T0057414.1 MGP_129S1SvImJ_G0026442.1 mouse_genomes_project 2 129852304 129902139 - MGP_129S1SvImJ_P0057414 Gabpb1 protein_coding protein_coding MGP_129S1SvImJ_T0057415.1 MGP_129S1SvImJ_G0026442.1 mouse_genomes_project 2 129852306 129902181 - MGP_129S1SvImJ_P0057415 Gabpb1 protein_coding protein_coding MGP_129S1SvImJ_T0057416.1 MGP_129S1SvImJ_G0026442.1 mouse_genomes_project 2 129865505 129902974 - MGP_129S1SvImJ_P0057416 Gabpb1 protein_coding protein_coding MGP_129S1SvImJ_T0057417.1 MGP_129S1SvImJ_G0026442.1 mouse_genomes_project 2 129865890 129902123 - MGP_129S1SvImJ_P0057417 Gabpb1 protein_coding protein_coding MGP_129S1SvImJ_T0057418.1 MGP_129S1SvImJ_G0026442.1 mouse_genomes_project 2 129874616 129902229 - MGP_129S1SvImJ_P0057418 Gabpb1 protein_coding protein_coding MGP_129S1SvImJ_T0057419.1 MGP_129S1SvImJ_G0026442.1 mouse_genomes_project 2 129879194 129901976 - Gabpb1 protein_coding processed_transcript MGP_129S1SvImJ_T0057420.1 MGP_129S1SvImJ_G0026442.1 mouse_genomes_project 2 129880483 129901989 - MGP_129S1SvImJ_P0057420 Gabpb1 protein_coding protein_coding MGP_129S1SvImJ_T0057421.1 MGP_129S1SvImJ_G0026442.1 mouse_genomes_project 2 129880560 129889911 - MGP_129S1SvImJ_P0057421 Gabpb1 protein_coding protein_coding MGP_129S1SvImJ_T0055921.1 MGP_129S1SvImJ_G0026104.1 mouse_genomes_project 2 90821101 90822002 - MGP_129S1SvImJ_P0055921 protein_coding protein_coding MGP_129S1SvImJ_T0013853.1 MGP_129S1SvImJ_G0011942.1 mouse_genomes_project 2 161541559 161542199 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013636.1 MGP_129S1SvImJ_G0011725.1 mouse_genomes_project 2 81507158 81507773 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004022.1 MGP_129S1SvImJ_G0003583.1 mouse_genomes_project 2 72405063 72412683 - Rapgef4os2 antisense antisense MGP_129S1SvImJ_T0053303.1 MGP_129S1SvImJ_G0025480.1 mouse_genomes_project 2 24199005 24246775 - MGP_129S1SvImJ_P0053303 Ccdc187 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0053305.1 MGP_129S1SvImJ_G0025480.1 mouse_genomes_project 2 24224420 24246949 - MGP_129S1SvImJ_P0053305 Ccdc187 protein_coding protein_coding MGP_129S1SvImJ_T0053306.1 MGP_129S1SvImJ_G0025480.1 mouse_genomes_project 2 24233835 24240537 - MGP_129S1SvImJ_P0053306 Ccdc187 protein_coding protein_coding MGP_129S1SvImJ_T0003988.1 MGP_129S1SvImJ_G0003559.1 mouse_genomes_project 2 37792009 37793555 - Gm13496 antisense antisense MGP_129S1SvImJ_T0058720.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161009311 161052801 - MGP_129S1SvImJ_P0058720 Rbm39 protein_coding protein_coding MGP_129S1SvImJ_T0058721.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161009312 161045689 - MGP_129S1SvImJ_P0058721 Rbm39 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0058722.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161009315 161052143 - MGP_129S1SvImJ_P0058722 Rbm39 protein_coding protein_coding MGP_129S1SvImJ_T0058723.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161009318 161052730 - MGP_129S1SvImJ_P0058723 Rbm39 protein_coding protein_coding MGP_129S1SvImJ_T0058724.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161009318 161052712 - MGP_129S1SvImJ_P0058724 Rbm39 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058725.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161010009 161052747 - MGP_129S1SvImJ_P0058725 Rbm39 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058726.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161010009 161052739 - MGP_129S1SvImJ_P0058726 Rbm39 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058727.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161011298 161028747 - MGP_129S1SvImJ_P0058727 Rbm39 protein_coding protein_coding MGP_129S1SvImJ_T0058728.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161024579 161052705 - MGP_129S1SvImJ_P0058728 Rbm39 protein_coding protein_coding MGP_129S1SvImJ_T0058729.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161024581 161029036 - Rbm39 protein_coding retained_intron MGP_129S1SvImJ_T0058730.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161025563 161034151 - Rbm39 protein_coding processed_transcript MGP_129S1SvImJ_T0058731.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161027812 161033062 - Rbm39 protein_coding retained_intron MGP_129S1SvImJ_T0058732.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161028629 161052722 - MGP_129S1SvImJ_P0058732 Rbm39 protein_coding protein_coding MGP_129S1SvImJ_T0058733.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161028743 161045501 - Rbm39 protein_coding processed_transcript MGP_129S1SvImJ_T0058734.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161032451 161050294 - Rbm39 protein_coding retained_intron MGP_129S1SvImJ_T0058735.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161034746 161049943 - Rbm39 protein_coding processed_transcript MGP_129S1SvImJ_T0058736.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161045372 161052724 - MGP_129S1SvImJ_P0058736 Rbm39 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058737.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161045471 161052710 - MGP_129S1SvImJ_P0058737 Rbm39 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058738.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161045493 161050464 - Rbm39 protein_coding retained_intron MGP_129S1SvImJ_T0058739.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161047241 161052475 - MGP_129S1SvImJ_P0058739 Rbm39 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058740.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161047245 161052719 - MGP_129S1SvImJ_P0058740 Rbm39 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058741.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161047330 161052801 - MGP_129S1SvImJ_P0058741 Rbm39 protein_coding protein_coding MGP_129S1SvImJ_T0058742.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161049720 161052759 - Rbm39 protein_coding retained_intron MGP_129S1SvImJ_T0058743.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161049920 161052712 - MGP_129S1SvImJ_P0058743 Rbm39 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058744.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161051121 161052775 - Rbm39 protein_coding retained_intron MGP_129S1SvImJ_T0058745.1 MGP_129S1SvImJ_G0026760.1 mouse_genomes_project 2 161051123 161052708 - Rbm39 protein_coding retained_intron MGP_129S1SvImJ_T0056496.1 MGP_129S1SvImJ_G0026218.1 mouse_genomes_project 2 106711180 106787341 + MGP_129S1SvImJ_P0056496 Cstf3 protein_coding protein_coding MGP_129S1SvImJ_T0056497.1 MGP_129S1SvImJ_G0026218.1 mouse_genomes_project 2 106711189 106731784 + Cstf3 protein_coding retained_intron MGP_129S1SvImJ_T0056498.1 MGP_129S1SvImJ_G0026218.1 mouse_genomes_project 2 106711272 106729816 + Cstf3 protein_coding retained_intron MGP_129S1SvImJ_T0056499.1 MGP_129S1SvImJ_G0026218.1 mouse_genomes_project 2 106743900 106786831 + MGP_129S1SvImJ_P0056499 Cstf3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0056500.1 MGP_129S1SvImJ_G0026218.1 mouse_genomes_project 2 106777422 106785350 + Cstf3 protein_coding processed_transcript MGP_129S1SvImJ_T0056502.1 MGP_129S1SvImJ_G0026218.1 mouse_genomes_project 2 106785047 106786091 + Cstf3 protein_coding processed_transcript MGP_129S1SvImJ_T0056503.1 MGP_129S1SvImJ_G0026218.1 mouse_genomes_project 2 106785577 106786651 + Cstf3 protein_coding processed_transcript MGP_129S1SvImJ_T0100962.1 MGP_129S1SvImJ_G0039029.1 mouse_genomes_project 2 114299391 114299522 + Gm26421 snoRNA snoRNA MGP_129S1SvImJ_T0057660.1 MGP_129S1SvImJ_G0026500.1 mouse_genomes_project 2 133849495 133856293 - MGP_129S1SvImJ_P0057660 Cpxm1 protein_coding protein_coding MGP_129S1SvImJ_T0057661.1 MGP_129S1SvImJ_G0026500.1 mouse_genomes_project 2 133849496 133851993 - Cpxm1 protein_coding retained_intron MGP_129S1SvImJ_T0056526.1 MGP_129S1SvImJ_G0026227.1 mouse_genomes_project 2 107277344 107325491 + MGP_129S1SvImJ_P0056526 Wt1 protein_coding protein_coding MGP_129S1SvImJ_T0056527.1 MGP_129S1SvImJ_G0026227.1 mouse_genomes_project 2 107277811 107324222 + MGP_129S1SvImJ_P0056527 Wt1 protein_coding protein_coding MGP_129S1SvImJ_T0056528.1 MGP_129S1SvImJ_G0026227.1 mouse_genomes_project 2 107277816 107324224 + MGP_129S1SvImJ_P0056528 Wt1 protein_coding protein_coding MGP_129S1SvImJ_T0056529.1 MGP_129S1SvImJ_G0026227.1 mouse_genomes_project 2 107277816 107324145 + MGP_129S1SvImJ_P0056529 Wt1 protein_coding protein_coding MGP_129S1SvImJ_T0056530.1 MGP_129S1SvImJ_G0026227.1 mouse_genomes_project 2 107281609 107284991 + Wt1 protein_coding retained_intron MGP_129S1SvImJ_T0056531.1 MGP_129S1SvImJ_G0026227.1 mouse_genomes_project 2 107281692 107325491 + MGP_129S1SvImJ_P0056531 Wt1 protein_coding protein_coding MGP_129S1SvImJ_T0056532.1 MGP_129S1SvImJ_G0026227.1 mouse_genomes_project 2 107281692 107325495 + MGP_129S1SvImJ_P0056532 Wt1 protein_coding protein_coding MGP_129S1SvImJ_T0056533.1 MGP_129S1SvImJ_G0026227.1 mouse_genomes_project 2 107314681 107321891 + Wt1 protein_coding retained_intron MGP_129S1SvImJ_T0059648.1 MGP_129S1SvImJ_G0026979.1 mouse_genomes_project 2 184861563 184917683 + MGP_129S1SvImJ_P0059648 Cdh26 protein_coding protein_coding MGP_129S1SvImJ_T0059649.1 MGP_129S1SvImJ_G0026979.1 mouse_genomes_project 2 184861639 184917685 + MGP_129S1SvImJ_P0059649 Cdh26 protein_coding protein_coding MGP_129S1SvImJ_T0059650.1 MGP_129S1SvImJ_G0026979.1 mouse_genomes_project 2 184888013 184895547 + Cdh26 protein_coding retained_intron MGP_129S1SvImJ_T0001124.1 MGP_129S1SvImJ_G0001052.1 mouse_genomes_project 2 175607734 175611997 - TEC TEC MGP_129S1SvImJ_T0010494.1 MGP_129S1SvImJ_G0008610.1 mouse_genomes_project 2 173400525 173400630 - Gm22355 miRNA miRNA MGP_129S1SvImJ_T0100932.1 MGP_129S1SvImJ_G0038999.1 mouse_genomes_project 2 36088002 36088113 - Snord90 snoRNA snoRNA MGP_129S1SvImJ_T0007440.1 MGP_129S1SvImJ_G0006106.1 mouse_genomes_project 2 186886450 186901652 - B230312C02Rik lincRNA lincRNA MGP_129S1SvImJ_T0004117.1 MGP_129S1SvImJ_G0003644.1 mouse_genomes_project 2 136307438 136311466 - Gm14097 antisense antisense MGP_129S1SvImJ_T0013721.1 MGP_129S1SvImJ_G0011810.1 mouse_genomes_project 2 109236602 109237100 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013610.1 MGP_129S1SvImJ_G0011699.1 mouse_genomes_project 2 73443736 73444081 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102415.1 MGP_129S1SvImJ_G0040249.1 mouse_genomes_project 2 87993400 87994338 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0056462.1 MGP_129S1SvImJ_G0026208.1 mouse_genomes_project 2 105978136 106002912 + MGP_129S1SvImJ_P0056462 Lmo2 protein_coding protein_coding MGP_129S1SvImJ_T0056463.1 MGP_129S1SvImJ_G0026208.1 mouse_genomes_project 2 105978145 106003740 + MGP_129S1SvImJ_P0056463 Lmo2 protein_coding protein_coding MGP_129S1SvImJ_T0056465.1 MGP_129S1SvImJ_G0026208.1 mouse_genomes_project 2 105991401 106002954 + MGP_129S1SvImJ_P0056465 Lmo2 protein_coding protein_coding MGP_129S1SvImJ_T0056466.1 MGP_129S1SvImJ_G0026208.1 mouse_genomes_project 2 105991996 106003717 + MGP_129S1SvImJ_P0056466 Lmo2 protein_coding protein_coding MGP_129S1SvImJ_T0056467.1 MGP_129S1SvImJ_G0026208.1 mouse_genomes_project 2 105992008 105998007 + MGP_129S1SvImJ_P0056467 Lmo2 protein_coding protein_coding MGP_129S1SvImJ_T0056468.1 MGP_129S1SvImJ_G0026208.1 mouse_genomes_project 2 105992090 106003736 + MGP_129S1SvImJ_P0056468 Lmo2 protein_coding protein_coding MGP_129S1SvImJ_T0056469.1 MGP_129S1SvImJ_G0026208.1 mouse_genomes_project 2 105992111 106003701 + MGP_129S1SvImJ_P0056469 Lmo2 protein_coding protein_coding MGP_129S1SvImJ_T0056470.1 MGP_129S1SvImJ_G0026208.1 mouse_genomes_project 2 105993046 106002778 + Lmo2 protein_coding processed_transcript MGP_129S1SvImJ_T0098746.1 MGP_129S1SvImJ_G0036831.1 mouse_genomes_project 2 161928154 161928289 - Gm27653 scaRNA scaRNA MGP_129S1SvImJ_T0007167.1 MGP_129S1SvImJ_G0005881.1 mouse_genomes_project 2 24081964 24085648 - C330006A16Rik lincRNA lincRNA MGP_129S1SvImJ_T0007168.1 MGP_129S1SvImJ_G0005881.1 mouse_genomes_project 2 24083509 24083929 - C330006A16Rik lincRNA lincRNA MGP_129S1SvImJ_T0010425.1 MGP_129S1SvImJ_G0008541.1 mouse_genomes_project 2 37399724 37401419 - miRNA miRNA MGP_129S1SvImJ_T0055942.1 MGP_129S1SvImJ_G0026117.1 mouse_genomes_project 2 91198655 91202898 + MGP_129S1SvImJ_P0055942 Olfr1262 protein_coding protein_coding MGP_129S1SvImJ_T0013418.1 MGP_129S1SvImJ_G0011507.1 mouse_genomes_project 2 1065411 1066708 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099675.1 MGP_129S1SvImJ_G0037742.1 mouse_genomes_project 2 63159064 63159171 - Gm23503 snRNA snRNA MGP_129S1SvImJ_T0003903.1 MGP_129S1SvImJ_G0003493.1 mouse_genomes_project 2 769968 772160 - Gm13185 antisense antisense MGP_129S1SvImJ_T0056513.1 MGP_129S1SvImJ_G0026222.1 mouse_genomes_project 2 106871815 106943438 - MGP_129S1SvImJ_P0056513 Qser1 protein_coding protein_coding MGP_129S1SvImJ_T0098559.1 MGP_129S1SvImJ_G0036644.1 mouse_genomes_project 2 61474259 61474376 + Gm25966 rRNA rRNA MGP_129S1SvImJ_T0013520.1 MGP_129S1SvImJ_G0011609.1 mouse_genomes_project 2 39007937 39008460 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054231.1 MGP_129S1SvImJ_G0025626.1 mouse_genomes_project 2 31377468 31427667 + MGP_129S1SvImJ_P0054231 Fam129b protein_coding protein_coding MGP_129S1SvImJ_T0054232.1 MGP_129S1SvImJ_G0025626.1 mouse_genomes_project 2 31396784 31410999 + MGP_129S1SvImJ_P0054232 Fam129b protein_coding protein_coding MGP_129S1SvImJ_T0054233.1 MGP_129S1SvImJ_G0025626.1 mouse_genomes_project 2 31411948 31413628 + Fam129b protein_coding retained_intron MGP_129S1SvImJ_T0054234.1 MGP_129S1SvImJ_G0025626.1 mouse_genomes_project 2 31417123 31423437 + Fam129b protein_coding processed_transcript MGP_129S1SvImJ_T0054235.1 MGP_129S1SvImJ_G0025626.1 mouse_genomes_project 2 31421053 31424520 + Fam129b protein_coding processed_transcript MGP_129S1SvImJ_T0054236.1 MGP_129S1SvImJ_G0025626.1 mouse_genomes_project 2 31424054 31426052 + Fam129b protein_coding processed_transcript MGP_129S1SvImJ_T0053603.1 MGP_129S1SvImJ_G0025535.1 mouse_genomes_project 2 27014662 27152555 - MGP_129S1SvImJ_P0053603 Cfap77 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053604.1 MGP_129S1SvImJ_G0025535.1 mouse_genomes_project 2 27014666 27152570 - MGP_129S1SvImJ_P0053604 Cfap77 protein_coding protein_coding MGP_129S1SvImJ_T0053605.1 MGP_129S1SvImJ_G0025535.1 mouse_genomes_project 2 27017192 27135338 - Cfap77 protein_coding processed_transcript MGP_129S1SvImJ_T0053606.1 MGP_129S1SvImJ_G0025535.1 mouse_genomes_project 2 27047947 27152597 - MGP_129S1SvImJ_P0053606 Cfap77 protein_coding protein_coding MGP_129S1SvImJ_T0053607.1 MGP_129S1SvImJ_G0025535.1 mouse_genomes_project 2 27149443 27152590 - Cfap77 protein_coding processed_transcript MGP_129S1SvImJ_T0057622.1 MGP_129S1SvImJ_G0026494.1 mouse_genomes_project 2 133536572 133593716 + Tgm6 protein_coding processed_transcript MGP_129S1SvImJ_T0057623.1 MGP_129S1SvImJ_G0026494.1 mouse_genomes_project 2 133547251 133593716 + Tgm6 protein_coding processed_transcript MGP_129S1SvImJ_T0057624.1 MGP_129S1SvImJ_G0026494.1 mouse_genomes_project 2 133547251 133593716 + MGP_129S1SvImJ_P0057624 Tgm6 protein_coding protein_coding MGP_129S1SvImJ_T0059931.1 MGP_129S1SvImJ_G0027030.1 mouse_genomes_project 2 188203238 188232264 + MGP_129S1SvImJ_P0059931 Prpf6 protein_coding protein_coding MGP_129S1SvImJ_T0059935.1 MGP_129S1SvImJ_G0027030.1 mouse_genomes_project 2 188213558 188278550 + MGP_129S1SvImJ_P0059935 Prpf6 protein_coding protein_coding MGP_129S1SvImJ_T0059936.1 MGP_129S1SvImJ_G0027030.1 mouse_genomes_project 2 188213561 188278559 + MGP_129S1SvImJ_P0059936 Prpf6 protein_coding protein_coding MGP_129S1SvImJ_T0059937.1 MGP_129S1SvImJ_G0027030.1 mouse_genomes_project 2 188213615 188264301 + Prpf6 protein_coding retained_intron MGP_129S1SvImJ_T0010463.1 MGP_129S1SvImJ_G0008579.1 mouse_genomes_project 2 118193223 118193312 + Mir1951 miRNA miRNA MGP_129S1SvImJ_T0013788.1 MGP_129S1SvImJ_G0011877.1 mouse_genomes_project 2 138422611 138422924 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057654.1 MGP_129S1SvImJ_G0026499.1 mouse_genomes_project 2 133743871 133829480 + MGP_129S1SvImJ_P0057654 Ebf4 protein_coding protein_coding MGP_129S1SvImJ_T0057655.1 MGP_129S1SvImJ_G0026499.1 mouse_genomes_project 2 133746602 133829480 + Ebf4 protein_coding retained_intron MGP_129S1SvImJ_T0057656.1 MGP_129S1SvImJ_G0026499.1 mouse_genomes_project 2 133746602 133829480 + MGP_129S1SvImJ_P0057656 Ebf4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057657.1 MGP_129S1SvImJ_G0026499.1 mouse_genomes_project 2 133746602 133829480 + MGP_129S1SvImJ_P0057657 Ebf4 protein_coding protein_coding MGP_129S1SvImJ_T0057658.1 MGP_129S1SvImJ_G0026499.1 mouse_genomes_project 2 133746602 133829480 + MGP_129S1SvImJ_P0057658 Ebf4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057659.1 MGP_129S1SvImJ_G0026499.1 mouse_genomes_project 2 133746602 133829480 + MGP_129S1SvImJ_P0057659 Ebf4 protein_coding protein_coding MGP_129S1SvImJ_T0013655.1 MGP_129S1SvImJ_G0011744.1 mouse_genomes_project 2 88248429 88249099 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099715.1 MGP_129S1SvImJ_G0037782.1 mouse_genomes_project 2 187758821 187758925 + Gm24892 snRNA snRNA MGP_129S1SvImJ_T0059157.1 MGP_129S1SvImJ_G0026858.1 mouse_genomes_project 2 170025015 170028758 - MGP_129S1SvImJ_P0059157 Spint3 protein_coding protein_coding MGP_129S1SvImJ_T0017827.1 MGP_129S1SvImJ_G0015435.1 mouse_genomes_project 2 87844177 87845496 - Gm13723 processed_transcript processed_transcript MGP_129S1SvImJ_T0053898.1 MGP_129S1SvImJ_G0025575.1 mouse_genomes_project 2 29118453 29172371 + MGP_129S1SvImJ_P0053898 Prrx2 protein_coding protein_coding MGP_129S1SvImJ_T0053899.1 MGP_129S1SvImJ_G0025575.1 mouse_genomes_project 2 29128543 29172400 + MGP_129S1SvImJ_P0053899 Prrx2 protein_coding protein_coding MGP_129S1SvImJ_T0053900.1 MGP_129S1SvImJ_G0025575.1 mouse_genomes_project 2 29128928 29169806 + Prrx2 protein_coding retained_intron MGP_129S1SvImJ_T0053901.1 MGP_129S1SvImJ_G0025575.1 mouse_genomes_project 2 29170467 29172269 + Prrx2 protein_coding retained_intron MGP_129S1SvImJ_T0059226.1 MGP_129S1SvImJ_G0026881.1 mouse_genomes_project 2 170391036 170396222 + Pcif1 protein_coding retained_intron MGP_129S1SvImJ_T0059227.1 MGP_129S1SvImJ_G0026881.1 mouse_genomes_project 2 170391097 170407478 + MGP_129S1SvImJ_P0059227 Pcif1 protein_coding protein_coding MGP_129S1SvImJ_T0059228.1 MGP_129S1SvImJ_G0026881.1 mouse_genomes_project 2 170391784 170396133 + Pcif1 protein_coding retained_intron MGP_129S1SvImJ_T0059229.1 MGP_129S1SvImJ_G0026881.1 mouse_genomes_project 2 170396955 170397717 + Pcif1 protein_coding retained_intron MGP_129S1SvImJ_T0057963.1 MGP_129S1SvImJ_G0026568.1 mouse_genomes_project 2 144079554 144081055 + MGP_129S1SvImJ_P0057963 Gm17374 protein_coding protein_coding MGP_129S1SvImJ_T0055770.1 MGP_129S1SvImJ_G0025977.1 mouse_genomes_project 2 87573569 87574511 - MGP_129S1SvImJ_P0055770 Olfr1085 protein_coding protein_coding MGP_129S1SvImJ_T0058218.1 MGP_129S1SvImJ_G0026636.1 mouse_genomes_project 2 155487210 155499705 - MGP_129S1SvImJ_P0058218 protein_coding protein_coding MGP_129S1SvImJ_T0007342.1 MGP_129S1SvImJ_G0006021.1 mouse_genomes_project 2 137122805 137125472 + Gm14100 lincRNA lincRNA MGP_129S1SvImJ_T0052412.1 MGP_129S1SvImJ_G0025323.1 mouse_genomes_project 2 2923316 2977460 - MGP_129S1SvImJ_P0052412 Cdc123 protein_coding protein_coding MGP_129S1SvImJ_T0052413.1 MGP_129S1SvImJ_G0025323.1 mouse_genomes_project 2 2923687 2927621 - Cdc123 protein_coding processed_transcript MGP_129S1SvImJ_T0052414.1 MGP_129S1SvImJ_G0025323.1 mouse_genomes_project 2 2927383 2933390 - Cdc123 protein_coding retained_intron MGP_129S1SvImJ_T0052415.1 MGP_129S1SvImJ_G0025323.1 mouse_genomes_project 2 2933847 2940514 - Cdc123 protein_coding processed_transcript MGP_129S1SvImJ_T0052416.1 MGP_129S1SvImJ_G0025323.1 mouse_genomes_project 2 2933966 2961867 - Cdc123 protein_coding retained_intron MGP_129S1SvImJ_T0052417.1 MGP_129S1SvImJ_G0025323.1 mouse_genomes_project 2 2939246 2962362 - MGP_129S1SvImJ_P0052417 Cdc123 protein_coding protein_coding MGP_129S1SvImJ_T0052418.1 MGP_129S1SvImJ_G0025323.1 mouse_genomes_project 2 2940409 2977237 - Cdc123 protein_coding retained_intron MGP_129S1SvImJ_T0052419.1 MGP_129S1SvImJ_G0025323.1 mouse_genomes_project 2 2949992 2951987 - Cdc123 protein_coding retained_intron MGP_129S1SvImJ_T0052420.1 MGP_129S1SvImJ_G0025323.1 mouse_genomes_project 2 2951683 2977147 - Cdc123 protein_coding processed_transcript MGP_129S1SvImJ_T0058243.1 MGP_129S1SvImJ_G0026641.1 mouse_genomes_project 2 156058186 156075568 + MGP_129S1SvImJ_P0058243 Sdcbp2 protein_coding protein_coding MGP_129S1SvImJ_T0007374.1 MGP_129S1SvImJ_G0006049.1 mouse_genomes_project 2 161348918 161352796 - Gm14224 lincRNA lincRNA MGP_129S1SvImJ_T0058832.1 MGP_129S1SvImJ_G0026776.1 mouse_genomes_project 2 162073744 162114687 - MGP_129S1SvImJ_P0058832 Samhd1 protein_coding protein_coding MGP_129S1SvImJ_T0058833.1 MGP_129S1SvImJ_G0026776.1 mouse_genomes_project 2 162076671 162114515 - MGP_129S1SvImJ_P0058833 Samhd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058834.1 MGP_129S1SvImJ_G0026776.1 mouse_genomes_project 2 162076671 162114542 - MGP_129S1SvImJ_P0058834 Samhd1 protein_coding protein_coding MGP_129S1SvImJ_T0058835.1 MGP_129S1SvImJ_G0026776.1 mouse_genomes_project 2 162078630 162114644 - MGP_129S1SvImJ_P0058835 Samhd1 protein_coding protein_coding MGP_129S1SvImJ_T0058836.1 MGP_129S1SvImJ_G0026776.1 mouse_genomes_project 2 162078964 162087626 - Samhd1 protein_coding retained_intron MGP_129S1SvImJ_T0058837.1 MGP_129S1SvImJ_G0026776.1 mouse_genomes_project 2 162080555 162114628 - MGP_129S1SvImJ_P0058837 Samhd1 protein_coding protein_coding MGP_129S1SvImJ_T0058838.1 MGP_129S1SvImJ_G0026776.1 mouse_genomes_project 2 162086293 162087625 - Samhd1 protein_coding retained_intron MGP_129S1SvImJ_T0058839.1 MGP_129S1SvImJ_G0026776.1 mouse_genomes_project 2 162097558 162114359 - Samhd1 protein_coding retained_intron MGP_129S1SvImJ_T0058840.1 MGP_129S1SvImJ_G0026776.1 mouse_genomes_project 2 162099841 162108050 - Samhd1 protein_coding retained_intron MGP_129S1SvImJ_T0055900.1 MGP_129S1SvImJ_G0026090.1 mouse_genomes_project 2 90473010 90473928 - MGP_129S1SvImJ_P0055900 Olfr1230 protein_coding protein_coding MGP_129S1SvImJ_T0101675.1 MGP_129S1SvImJ_G0039696.1 mouse_genomes_project 2 134289671 134290153 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0057080.1 MGP_129S1SvImJ_G0026373.1 mouse_genomes_project 2 123590213 123606647 - MGP_129S1SvImJ_P0057080 Cdan1 protein_coding protein_coding MGP_129S1SvImJ_T0057081.1 MGP_129S1SvImJ_G0026373.1 mouse_genomes_project 2 123590569 123606648 - MGP_129S1SvImJ_P0057081 Cdan1 protein_coding protein_coding MGP_129S1SvImJ_T0057082.1 MGP_129S1SvImJ_G0026373.1 mouse_genomes_project 2 123592236 123716784 - Cdan1 protein_coding processed_transcript MGP_129S1SvImJ_T0057083.1 MGP_129S1SvImJ_G0026373.1 mouse_genomes_project 2 123592671 123594563 - Cdan1 protein_coding processed_transcript MGP_129S1SvImJ_T0057084.1 MGP_129S1SvImJ_G0026373.1 mouse_genomes_project 2 123597519 123599585 - Cdan1 protein_coding retained_intron MGP_129S1SvImJ_T0057085.1 MGP_129S1SvImJ_G0026373.1 mouse_genomes_project 2 123600740 123603107 - Cdan1 protein_coding retained_intron MGP_129S1SvImJ_T0057086.1 MGP_129S1SvImJ_G0026373.1 mouse_genomes_project 2 123603047 123603768 - Cdan1 protein_coding retained_intron MGP_129S1SvImJ_T0057087.1 MGP_129S1SvImJ_G0026373.1 mouse_genomes_project 2 123603757 123606636 - Cdan1 protein_coding processed_transcript MGP_129S1SvImJ_T0057088.1 MGP_129S1SvImJ_G0026373.1 mouse_genomes_project 2 123605071 123606620 - Cdan1 protein_coding processed_transcript MGP_129S1SvImJ_T0007197.1 MGP_129S1SvImJ_G0005903.1 mouse_genomes_project 2 44443902 44495021 + Gm13479 lincRNA lincRNA MGP_129S1SvImJ_T0003970.1 MGP_129S1SvImJ_G0003545.1 mouse_genomes_project 2 31342820 31344803 + Gm13524 antisense antisense MGP_129S1SvImJ_T0052407.1 MGP_129S1SvImJ_G0025321.1 mouse_genomes_project 2 2241256 2344780 + MGP_129S1SvImJ_P0052407 Ccdc3 protein_coding protein_coding MGP_129S1SvImJ_T0059440.1 MGP_129S1SvImJ_G0026920.1 mouse_genomes_project 2 173776382 173806237 - Fam65c protein_coding processed_transcript MGP_129S1SvImJ_T0059441.1 MGP_129S1SvImJ_G0026920.1 mouse_genomes_project 2 173776384 173806237 - MGP_129S1SvImJ_P0059441 Fam65c protein_coding protein_coding MGP_129S1SvImJ_T0059442.1 MGP_129S1SvImJ_G0026920.1 mouse_genomes_project 2 173781330 173783028 - Fam65c protein_coding retained_intron MGP_129S1SvImJ_T0059443.1 MGP_129S1SvImJ_G0026920.1 mouse_genomes_project 2 173785059 173787605 - Fam65c protein_coding retained_intron MGP_129S1SvImJ_T0007161.1 MGP_129S1SvImJ_G0005877.1 mouse_genomes_project 2 22358443 22381773 - Gm13417 lincRNA lincRNA MGP_129S1SvImJ_T0057408.1 MGP_129S1SvImJ_G0026441.1 mouse_genomes_project 2 129816503 129839224 - MGP_129S1SvImJ_P0057408 Hdc protein_coding protein_coding MGP_129S1SvImJ_T0057409.1 MGP_129S1SvImJ_G0026441.1 mouse_genomes_project 2 129817420 129822447 - Hdc protein_coding processed_transcript MGP_129S1SvImJ_T0057410.1 MGP_129S1SvImJ_G0026441.1 mouse_genomes_project 2 129824421 129839207 - Hdc protein_coding retained_intron MGP_129S1SvImJ_T0057411.1 MGP_129S1SvImJ_G0026441.1 mouse_genomes_project 2 129828298 129831611 - Hdc protein_coding processed_transcript MGP_129S1SvImJ_T0057412.1 MGP_129S1SvImJ_G0026441.1 mouse_genomes_project 2 129835514 129839845 - Hdc protein_coding processed_transcript MGP_129S1SvImJ_T0055653.1 MGP_129S1SvImJ_G0025907.1 mouse_genomes_project 2 85409881 85415872 - MGP_129S1SvImJ_P0055653 Clp1 protein_coding protein_coding MGP_129S1SvImJ_T0055654.1 MGP_129S1SvImJ_G0025907.1 mouse_genomes_project 2 85411751 85415980 - MGP_129S1SvImJ_P0055654 Clp1 protein_coding protein_coding MGP_129S1SvImJ_T0055655.1 MGP_129S1SvImJ_G0025907.1 mouse_genomes_project 2 85411753 85415906 - Clp1 protein_coding processed_transcript MGP_129S1SvImJ_T0059686.1 MGP_129S1SvImJ_G0026987.1 mouse_genomes_project 2 186619838 186667219 + MGP_129S1SvImJ_P0059686 Osbpl2 protein_coding protein_coding MGP_129S1SvImJ_T0059687.1 MGP_129S1SvImJ_G0026987.1 mouse_genomes_project 2 186619867 186639503 + Osbpl2 protein_coding processed_transcript MGP_129S1SvImJ_T0059688.1 MGP_129S1SvImJ_G0026987.1 mouse_genomes_project 2 186619936 186662932 + Osbpl2 protein_coding retained_intron MGP_129S1SvImJ_T0059689.1 MGP_129S1SvImJ_G0026987.1 mouse_genomes_project 2 186652897 186654927 + Osbpl2 protein_coding retained_intron MGP_129S1SvImJ_T0055901.1 MGP_129S1SvImJ_G0026091.1 mouse_genomes_project 2 90479308 90480250 - MGP_129S1SvImJ_P0055901 Olfr1231 protein_coding protein_coding MGP_129S1SvImJ_T0058712.1 MGP_129S1SvImJ_G0026758.1 mouse_genomes_project 2 160980036 161006257 - MGP_129S1SvImJ_P0058712 Nfs1 protein_coding protein_coding MGP_129S1SvImJ_T0058713.1 MGP_129S1SvImJ_G0026758.1 mouse_genomes_project 2 160980047 161002018 - MGP_129S1SvImJ_P0058713 Nfs1 protein_coding protein_coding MGP_129S1SvImJ_T0058714.1 MGP_129S1SvImJ_G0026758.1 mouse_genomes_project 2 161000694 161006224 - Nfs1 protein_coding retained_intron MGP_129S1SvImJ_T0058715.1 MGP_129S1SvImJ_G0026758.1 mouse_genomes_project 2 161003985 161006251 - MGP_129S1SvImJ_P0058715 Nfs1 protein_coding protein_coding MGP_129S1SvImJ_T0017817.1 MGP_129S1SvImJ_G0015426.1 mouse_genomes_project 2 71905424 71908117 + Gm13663 processed_transcript processed_transcript MGP_129S1SvImJ_T0017818.1 MGP_129S1SvImJ_G0015426.1 mouse_genomes_project 2 71906386 71908077 + Gm13663 processed_transcript processed_transcript MGP_129S1SvImJ_T0010370.1 MGP_129S1SvImJ_G0008486.1 mouse_genomes_project 2 7866213 7866311 + Mir297c miRNA miRNA MGP_129S1SvImJ_T0017917.1 MGP_129S1SvImJ_G0015478.1 mouse_genomes_project 2 156875645 156909471 + Gm14164 processed_transcript processed_transcript MGP_129S1SvImJ_T0017918.1 MGP_129S1SvImJ_G0015478.1 mouse_genomes_project 2 156908894 156909296 + Gm14164 processed_transcript processed_transcript MGP_129S1SvImJ_T0099683.1 MGP_129S1SvImJ_G0037750.1 mouse_genomes_project 2 85389966 85390067 + Gm27942 snRNA snRNA MGP_129S1SvImJ_T0055861.1 MGP_129S1SvImJ_G0026056.1 mouse_genomes_project 2 89604687 89605623 + MGP_129S1SvImJ_P0055861 Olfr1184 protein_coding protein_coding MGP_129S1SvImJ_T0013578.1 MGP_129S1SvImJ_G0011667.1 mouse_genomes_project 2 60854243 60854534 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057304.1 MGP_129S1SvImJ_G0026415.1 mouse_genomes_project 2 125431241 125554775 + MGP_129S1SvImJ_P0057304 protein_coding protein_coding MGP_129S1SvImJ_T0056976.1 MGP_129S1SvImJ_G0026358.1 mouse_genomes_project 2 122888481 122897016 + protein_coding retained_intron MGP_129S1SvImJ_T0056977.1 MGP_129S1SvImJ_G0026358.1 mouse_genomes_project 2 122888497 122898077 + protein_coding retained_intron MGP_129S1SvImJ_T0056978.1 MGP_129S1SvImJ_G0026358.1 mouse_genomes_project 2 122888497 122897015 + MGP_129S1SvImJ_P0056978 protein_coding protein_coding MGP_129S1SvImJ_T0056979.1 MGP_129S1SvImJ_G0026358.1 mouse_genomes_project 2 122889607 122891182 + protein_coding retained_intron MGP_129S1SvImJ_T0056980.1 MGP_129S1SvImJ_G0026358.1 mouse_genomes_project 2 122893919 122895499 + protein_coding retained_intron MGP_129S1SvImJ_T0056981.1 MGP_129S1SvImJ_G0026358.1 mouse_genomes_project 2 122896020 122896741 + protein_coding retained_intron MGP_129S1SvImJ_T0055728.1 MGP_129S1SvImJ_G0025937.1 mouse_genomes_project 2 86555132 86556050 + MGP_129S1SvImJ_P0055728 Olfr1014 protein_coding protein_coding MGP_129S1SvImJ_T0056688.1 MGP_129S1SvImJ_G0026291.1 mouse_genomes_project 2 114904437 114923809 + MGP_129S1SvImJ_P0056688 Emc7 protein_coding protein_coding MGP_129S1SvImJ_T0059707.1 MGP_129S1SvImJ_G0026991.1 mouse_genomes_project 2 186773649 186789341 - MGP_129S1SvImJ_P0059707 Cables2 protein_coding protein_coding MGP_129S1SvImJ_T0059708.1 MGP_129S1SvImJ_G0026991.1 mouse_genomes_project 2 186773652 186789308 - Cables2 protein_coding retained_intron MGP_129S1SvImJ_T0059709.1 MGP_129S1SvImJ_G0026991.1 mouse_genomes_project 2 186776245 186777610 - Cables2 protein_coding retained_intron MGP_129S1SvImJ_T0059710.1 MGP_129S1SvImJ_G0026991.1 mouse_genomes_project 2 186777976 186789341 - Cables2 protein_coding retained_intron MGP_129S1SvImJ_T0059711.1 MGP_129S1SvImJ_G0026991.1 mouse_genomes_project 2 186778699 186789291 - Cables2 protein_coding retained_intron MGP_129S1SvImJ_T0013792.1 MGP_129S1SvImJ_G0011881.1 mouse_genomes_project 2 142764568 142764882 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058490.1 MGP_129S1SvImJ_G0026718.1 mouse_genomes_project 2 159307238 159308739 + MGP_129S1SvImJ_P0058490 Actl10 protein_coding protein_coding MGP_129S1SvImJ_T0059989.1 MGP_129S1SvImJ_G0027041.1 mouse_genomes_project 2 188625403 188644163 + MGP_129S1SvImJ_P0059989 Gm14496 protein_coding protein_coding MGP_129S1SvImJ_T0059991.1 MGP_129S1SvImJ_G0027041.1 mouse_genomes_project 2 188625553 188644804 + Gm14496 protein_coding processed_transcript MGP_129S1SvImJ_T0059992.1 MGP_129S1SvImJ_G0027041.1 mouse_genomes_project 2 188638791 188644104 + Gm14496 protein_coding transcribed_processed_pseudogene MGP_129S1SvImJ_T0059426.1 MGP_129S1SvImJ_G0026916.1 mouse_genomes_project 2 173360626 173388128 - MGP_129S1SvImJ_P0059426 Ube2v1 protein_coding protein_coding MGP_129S1SvImJ_T0059427.1 MGP_129S1SvImJ_G0026916.1 mouse_genomes_project 2 173369746 173388131 - Ube2v1 protein_coding retained_intron MGP_129S1SvImJ_T0059755.1 MGP_129S1SvImJ_G0027004.1 mouse_genomes_project 2 187470819 187487545 - MGP_129S1SvImJ_P0059755 Ythdf1 protein_coding protein_coding MGP_129S1SvImJ_T0059756.1 MGP_129S1SvImJ_G0027004.1 mouse_genomes_project 2 187471815 187487545 - MGP_129S1SvImJ_P0059756 Ythdf1 protein_coding protein_coding MGP_129S1SvImJ_T0059757.1 MGP_129S1SvImJ_G0027004.1 mouse_genomes_project 2 187478389 187486983 - MGP_129S1SvImJ_P0059757 Ythdf1 protein_coding protein_coding MGP_129S1SvImJ_T0058276.1 MGP_129S1SvImJ_G0026651.1 mouse_genomes_project 2 156631191 156634990 + Srxn1 protein_coding processed_transcript MGP_129S1SvImJ_T0058277.1 MGP_129S1SvImJ_G0026651.1 mouse_genomes_project 2 156631191 156634879 + Srxn1 protein_coding processed_transcript MGP_129S1SvImJ_T0058278.1 MGP_129S1SvImJ_G0026651.1 mouse_genomes_project 2 156631199 156637044 + MGP_129S1SvImJ_P0058278 Srxn1 protein_coding protein_coding MGP_129S1SvImJ_T0059152.1 MGP_129S1SvImJ_G0026857.1 mouse_genomes_project 2 170017740 170018878 + Wfdc2 protein_coding processed_transcript MGP_129S1SvImJ_T0059153.1 MGP_129S1SvImJ_G0026857.1 mouse_genomes_project 2 170017906 170023835 + MGP_129S1SvImJ_P0059153 Wfdc2 protein_coding protein_coding MGP_129S1SvImJ_T0059154.1 MGP_129S1SvImJ_G0026857.1 mouse_genomes_project 2 170018026 170023835 + MGP_129S1SvImJ_P0059154 Wfdc2 protein_coding protein_coding MGP_129S1SvImJ_T0059155.1 MGP_129S1SvImJ_G0026857.1 mouse_genomes_project 2 170018041 170023835 + MGP_129S1SvImJ_P0059155 Wfdc2 protein_coding protein_coding MGP_129S1SvImJ_T0059156.1 MGP_129S1SvImJ_G0026857.1 mouse_genomes_project 2 170018346 170019511 + MGP_129S1SvImJ_P0059156 Wfdc2 protein_coding protein_coding MGP_129S1SvImJ_T0056667.1 MGP_129S1SvImJ_G0026282.1 mouse_genomes_project 2 114537593 114538305 - MGP_129S1SvImJ_P0056667 protein_coding protein_coding MGP_129S1SvImJ_T0057707.1 MGP_129S1SvImJ_G0026515.1 mouse_genomes_project 2 134158018 134162470 - Slc4a11 protein_coding retained_intron MGP_129S1SvImJ_T0057708.1 MGP_129S1SvImJ_G0026515.1 mouse_genomes_project 2 134158018 134173150 - MGP_129S1SvImJ_P0057708 Slc4a11 protein_coding protein_coding MGP_129S1SvImJ_T0057709.1 MGP_129S1SvImJ_G0026515.1 mouse_genomes_project 2 134160482 134173100 - Slc4a11 protein_coding retained_intron MGP_129S1SvImJ_T0057710.1 MGP_129S1SvImJ_G0026515.1 mouse_genomes_project 2 134166463 134167613 - Slc4a11 protein_coding retained_intron MGP_129S1SvImJ_T0057711.1 MGP_129S1SvImJ_G0026515.1 mouse_genomes_project 2 134167179 134173100 - MGP_129S1SvImJ_P0057711 Slc4a11 protein_coding protein_coding MGP_129S1SvImJ_T0055932.1 MGP_129S1SvImJ_G0026113.1 mouse_genomes_project 2 91042817 91043723 - MGP_129S1SvImJ_P0055932 Olfr48 protein_coding protein_coding MGP_129S1SvImJ_T0100924.1 MGP_129S1SvImJ_G0038991.1 mouse_genomes_project 2 24884172 24884243 + Gm24134 snoRNA snoRNA MGP_129S1SvImJ_T0056674.1 MGP_129S1SvImJ_G0026286.1 mouse_genomes_project 2 114706284 114707630 + MGP_129S1SvImJ_P0056674 Nop10 protein_coding protein_coding MGP_129S1SvImJ_T0013562.1 MGP_129S1SvImJ_G0011651.1 mouse_genomes_project 2 56927884 56928427 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053921.1 MGP_129S1SvImJ_G0025580.1 mouse_genomes_project 2 29281294 29324109 + MGP_129S1SvImJ_P0053921 Usp20 protein_coding protein_coding MGP_129S1SvImJ_T0053922.1 MGP_129S1SvImJ_G0025580.1 mouse_genomes_project 2 29281349 29283250 + Usp20 protein_coding retained_intron MGP_129S1SvImJ_T0053923.1 MGP_129S1SvImJ_G0025580.1 mouse_genomes_project 2 29281378 29308115 + MGP_129S1SvImJ_P0053923 Usp20 protein_coding protein_coding MGP_129S1SvImJ_T0053924.1 MGP_129S1SvImJ_G0025580.1 mouse_genomes_project 2 29281412 29303470 + MGP_129S1SvImJ_P0053924 Usp20 protein_coding protein_coding MGP_129S1SvImJ_T0053925.1 MGP_129S1SvImJ_G0025580.1 mouse_genomes_project 2 29281444 29300135 + MGP_129S1SvImJ_P0053925 Usp20 protein_coding protein_coding MGP_129S1SvImJ_T0053926.1 MGP_129S1SvImJ_G0025580.1 mouse_genomes_project 2 29294671 29303139 + MGP_129S1SvImJ_P0053926 Usp20 protein_coding protein_coding MGP_129S1SvImJ_T0053927.1 MGP_129S1SvImJ_G0025580.1 mouse_genomes_project 2 29294772 29303470 + MGP_129S1SvImJ_P0053927 Usp20 protein_coding protein_coding MGP_129S1SvImJ_T0053928.1 MGP_129S1SvImJ_G0025580.1 mouse_genomes_project 2 29295058 29324105 + MGP_129S1SvImJ_P0053928 Usp20 protein_coding protein_coding MGP_129S1SvImJ_T0053929.1 MGP_129S1SvImJ_G0025580.1 mouse_genomes_project 2 29295064 29306916 + Usp20 protein_coding processed_transcript MGP_129S1SvImJ_T0053930.1 MGP_129S1SvImJ_G0025580.1 mouse_genomes_project 2 29298897 29306945 + MGP_129S1SvImJ_P0053930 Usp20 protein_coding protein_coding MGP_129S1SvImJ_T0053931.1 MGP_129S1SvImJ_G0025580.1 mouse_genomes_project 2 29303081 29304247 + Usp20 protein_coding retained_intron MGP_129S1SvImJ_T0053932.1 MGP_129S1SvImJ_G0025580.1 mouse_genomes_project 2 29320341 29321904 + Usp20 protein_coding retained_intron MGP_129S1SvImJ_T0055098.1 MGP_129S1SvImJ_G0025792.1 mouse_genomes_project 2 68586316 68617251 + MGP_129S1SvImJ_P0055098 4932414N04Rik protein_coding protein_coding MGP_129S1SvImJ_T0055099.1 MGP_129S1SvImJ_G0025792.1 mouse_genomes_project 2 68587689 68666202 + MGP_129S1SvImJ_P0055099 4932414N04Rik protein_coding protein_coding MGP_129S1SvImJ_T0055100.1 MGP_129S1SvImJ_G0025792.1 mouse_genomes_project 2 68587718 68602700 + 4932414N04Rik protein_coding processed_transcript MGP_129S1SvImJ_T0055101.1 MGP_129S1SvImJ_G0025792.1 mouse_genomes_project 2 68589643 68666200 + MGP_129S1SvImJ_P0055101 4932414N04Rik protein_coding protein_coding MGP_129S1SvImJ_T0055102.1 MGP_129S1SvImJ_G0025792.1 mouse_genomes_project 2 68641023 68642020 + 4932414N04Rik protein_coding retained_intron MGP_129S1SvImJ_T0054957.1 MGP_129S1SvImJ_G0025766.1 mouse_genomes_project 2 61384139 61476455 + MGP_129S1SvImJ_P0054957 Psmd14 protein_coding protein_coding MGP_129S1SvImJ_T0054958.1 MGP_129S1SvImJ_G0025766.1 mouse_genomes_project 2 61384187 61394093 + Psmd14 protein_coding processed_transcript MGP_129S1SvImJ_T0054959.1 MGP_129S1SvImJ_G0025766.1 mouse_genomes_project 2 61384205 61438090 + Psmd14 protein_coding processed_transcript MGP_129S1SvImJ_T0054960.1 MGP_129S1SvImJ_G0025766.1 mouse_genomes_project 2 61384225 61398973 + Psmd14 protein_coding processed_transcript MGP_129S1SvImJ_T0054961.1 MGP_129S1SvImJ_G0025766.1 mouse_genomes_project 2 61384236 61434556 + Psmd14 protein_coding processed_transcript MGP_129S1SvImJ_T0054962.1 MGP_129S1SvImJ_G0025766.1 mouse_genomes_project 2 61388268 61424211 + Psmd14 protein_coding processed_transcript MGP_129S1SvImJ_T0054963.1 MGP_129S1SvImJ_G0025766.1 mouse_genomes_project 2 61438569 61476132 + Psmd14 protein_coding processed_transcript MGP_129S1SvImJ_T0054964.1 MGP_129S1SvImJ_G0025766.1 mouse_genomes_project 2 61450932 61476153 + Psmd14 protein_coding processed_transcript MGP_129S1SvImJ_T0007283.1 MGP_129S1SvImJ_G0005975.1 mouse_genomes_project 2 105138313 105143419 + Gm13874 lincRNA lincRNA MGP_129S1SvImJ_T0007284.1 MGP_129S1SvImJ_G0005975.1 mouse_genomes_project 2 105138697 105143419 + Gm13874 lincRNA lincRNA MGP_129S1SvImJ_T0007285.1 MGP_129S1SvImJ_G0005975.1 mouse_genomes_project 2 105142752 105147221 + Gm13874 lincRNA lincRNA MGP_129S1SvImJ_T0007141.1 MGP_129S1SvImJ_G0005862.1 mouse_genomes_project 2 6478951 6487787 + 1700061F12Rik lincRNA lincRNA MGP_129S1SvImJ_T0058602.1 MGP_129S1SvImJ_G0026741.1 mouse_genomes_project 2 160573974 160574031 - MGP_129S1SvImJ_P0058602 Gm17581 protein_coding protein_coding MGP_129S1SvImJ_T0053228.1 MGP_129S1SvImJ_G0025459.1 mouse_genomes_project 2 23517613 23528369 - MGP_129S1SvImJ_P0053228 Ccdc183 protein_coding protein_coding MGP_129S1SvImJ_T0053229.1 MGP_129S1SvImJ_G0025459.1 mouse_genomes_project 2 23517671 23528350 - Ccdc183 protein_coding processed_transcript MGP_129S1SvImJ_T0102396.1 MGP_129S1SvImJ_G0040230.1 mouse_genomes_project 2 86140181 86141077 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0004023.1 MGP_129S1SvImJ_G0003584.1 mouse_genomes_project 2 72426532 72431746 - Rapgef4os3 antisense antisense MGP_129S1SvImJ_T0007267.1 MGP_129S1SvImJ_G0005963.1 mouse_genomes_project 2 93919099 93968191 + Gm13814 lincRNA lincRNA MGP_129S1SvImJ_T0017913.1 MGP_129S1SvImJ_G0015475.1 mouse_genomes_project 2 149809005 149860198 + BC039771 processed_transcript processed_transcript MGP_129S1SvImJ_T0017914.1 MGP_129S1SvImJ_G0015475.1 mouse_genomes_project 2 149835368 149901368 + BC039771 processed_transcript processed_transcript MGP_129S1SvImJ_T0053018.1 MGP_129S1SvImJ_G0025420.1 mouse_genomes_project 2 22938633 22948116 - MGP_129S1SvImJ_P0053018 Noxa1 protein_coding protein_coding MGP_129S1SvImJ_T0053019.1 MGP_129S1SvImJ_G0025420.1 mouse_genomes_project 2 22938633 22948098 - MGP_129S1SvImJ_P0053019 Noxa1 protein_coding protein_coding MGP_129S1SvImJ_T0013497.1 MGP_129S1SvImJ_G0011586.1 mouse_genomes_project 2 33973096 33973654 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099712.1 MGP_129S1SvImJ_G0037779.1 mouse_genomes_project 2 170076323 170076430 + Gm25512 snRNA snRNA MGP_129S1SvImJ_T0007235.1 MGP_129S1SvImJ_G0005935.1 mouse_genomes_project 2 73738684 73756579 + Gm13708 lincRNA lincRNA MGP_129S1SvImJ_T0057029.1 MGP_129S1SvImJ_G0026367.1 mouse_genomes_project 2 123323600 123374913 + Capn3 protein_coding processed_transcript MGP_129S1SvImJ_T0057030.1 MGP_129S1SvImJ_G0026367.1 mouse_genomes_project 2 123323600 123374773 + Capn3 protein_coding processed_transcript MGP_129S1SvImJ_T0057031.1 MGP_129S1SvImJ_G0026367.1 mouse_genomes_project 2 123331404 123374913 + MGP_129S1SvImJ_P0057031 Capn3 protein_coding protein_coding MGP_129S1SvImJ_T0057032.1 MGP_129S1SvImJ_G0026367.1 mouse_genomes_project 2 123331404 123374913 + MGP_129S1SvImJ_P0057032 Capn3 protein_coding protein_coding MGP_129S1SvImJ_T0057033.1 MGP_129S1SvImJ_G0026367.1 mouse_genomes_project 2 123331698 123374913 + MGP_129S1SvImJ_P0057033 Capn3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0057034.1 MGP_129S1SvImJ_G0026367.1 mouse_genomes_project 2 123345822 123374913 + MGP_129S1SvImJ_P0057034 Capn3 protein_coding protein_coding MGP_129S1SvImJ_T0057035.1 MGP_129S1SvImJ_G0026367.1 mouse_genomes_project 2 123345824 123374913 + MGP_129S1SvImJ_P0057035 Capn3 protein_coding protein_coding MGP_129S1SvImJ_T0057036.1 MGP_129S1SvImJ_G0026367.1 mouse_genomes_project 2 123345874 123374913 + MGP_129S1SvImJ_P0057036 Capn3 protein_coding protein_coding MGP_129S1SvImJ_T0057037.1 MGP_129S1SvImJ_G0026367.1 mouse_genomes_project 2 123345880 123374514 + Capn3 protein_coding processed_transcript MGP_129S1SvImJ_T0057038.1 MGP_129S1SvImJ_G0026367.1 mouse_genomes_project 2 123345880 123374913 + MGP_129S1SvImJ_P0057038 Capn3 protein_coding protein_coding MGP_129S1SvImJ_T0057039.1 MGP_129S1SvImJ_G0026367.1 mouse_genomes_project 2 123353493 123353768 + Capn3 protein_coding processed_transcript MGP_129S1SvImJ_T0057040.1 MGP_129S1SvImJ_G0026367.1 mouse_genomes_project 2 123370244 123373217 + Capn3 protein_coding processed_transcript MGP_129S1SvImJ_T0057041.1 MGP_129S1SvImJ_G0026367.1 mouse_genomes_project 2 123371232 123373042 + Capn3 protein_coding processed_transcript MGP_129S1SvImJ_T0057042.1 MGP_129S1SvImJ_G0026367.1 mouse_genomes_project 2 123371306 123373395 + Capn3 protein_coding processed_transcript MGP_129S1SvImJ_T0056807.1 MGP_129S1SvImJ_G0026320.1 mouse_genomes_project 2 121404575 121425391 - MGP_129S1SvImJ_P0056807 Plcb2 protein_coding protein_coding MGP_129S1SvImJ_T0056808.1 MGP_129S1SvImJ_G0026320.1 mouse_genomes_project 2 121405054 121425312 - MGP_129S1SvImJ_P0056808 Plcb2 protein_coding protein_coding MGP_129S1SvImJ_T0056809.1 MGP_129S1SvImJ_G0026320.1 mouse_genomes_project 2 121405238 121408429 - Plcb2 protein_coding retained_intron MGP_129S1SvImJ_T0056810.1 MGP_129S1SvImJ_G0026320.1 mouse_genomes_project 2 121405757 121406800 - Plcb2 protein_coding retained_intron MGP_129S1SvImJ_T0056811.1 MGP_129S1SvImJ_G0026320.1 mouse_genomes_project 2 121407875 121411168 - Plcb2 protein_coding retained_intron MGP_129S1SvImJ_T0056812.1 MGP_129S1SvImJ_G0026320.1 mouse_genomes_project 2 121411296 121425344 - Plcb2 protein_coding retained_intron MGP_129S1SvImJ_T0053040.1 MGP_129S1SvImJ_G0025426.1 mouse_genomes_project 2 23087359 23091108 - MGP_129S1SvImJ_P0053040 protein_coding protein_coding MGP_129S1SvImJ_T0053041.1 MGP_129S1SvImJ_G0025426.1 mouse_genomes_project 2 23089928 23091060 - protein_coding processed_transcript MGP_129S1SvImJ_T0010480.1 MGP_129S1SvImJ_G0008596.1 mouse_genomes_project 2 150041007 150041195 + Gm25026 miRNA miRNA MGP_129S1SvImJ_T0054624.1 MGP_129S1SvImJ_G0025713.1 mouse_genomes_project 2 39009198 39009623 - MGP_129S1SvImJ_P0054624 protein_coding protein_coding MGP_129S1SvImJ_T0052350.1 MGP_129S1SvImJ_G0025313.1 mouse_genomes_project 2 1032055 1192826 + Frmd4a protein_coding processed_transcript MGP_129S1SvImJ_T0052351.1 MGP_129S1SvImJ_G0025313.1 mouse_genomes_project 2 1032072 1036242 + Frmd4a protein_coding retained_intron MGP_129S1SvImJ_T0052352.1 MGP_129S1SvImJ_G0025313.1 mouse_genomes_project 2 1032082 1667079 + MGP_129S1SvImJ_P0052352 Frmd4a protein_coding protein_coding MGP_129S1SvImJ_T0052353.1 MGP_129S1SvImJ_G0025313.1 mouse_genomes_project 2 1178795 1197245 + Frmd4a protein_coding processed_transcript MGP_129S1SvImJ_T0052354.1 MGP_129S1SvImJ_G0025313.1 mouse_genomes_project 2 1178804 1666980 + MGP_129S1SvImJ_P0052354 Frmd4a protein_coding protein_coding MGP_129S1SvImJ_T0052355.1 MGP_129S1SvImJ_G0025313.1 mouse_genomes_project 2 1330479 1624221 + MGP_129S1SvImJ_P0052355 Frmd4a protein_coding protein_coding MGP_129S1SvImJ_T0052356.1 MGP_129S1SvImJ_G0025313.1 mouse_genomes_project 2 1330844 1585458 + Frmd4a protein_coding retained_intron MGP_129S1SvImJ_T0052357.1 MGP_129S1SvImJ_G0025313.1 mouse_genomes_project 2 1330962 1612055 + MGP_129S1SvImJ_P0052357 Frmd4a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052358.1 MGP_129S1SvImJ_G0025313.1 mouse_genomes_project 2 1362775 1646417 + MGP_129S1SvImJ_P0052358 Frmd4a protein_coding protein_coding MGP_129S1SvImJ_T0052359.1 MGP_129S1SvImJ_G0025313.1 mouse_genomes_project 2 1430827 1575320 + MGP_129S1SvImJ_P0052359 Frmd4a protein_coding protein_coding MGP_129S1SvImJ_T0052360.1 MGP_129S1SvImJ_G0025313.1 mouse_genomes_project 2 1430829 1477064 + Frmd4a protein_coding retained_intron MGP_129S1SvImJ_T0052361.1 MGP_129S1SvImJ_G0025313.1 mouse_genomes_project 2 1441935 1667081 + MGP_129S1SvImJ_P0052361 Frmd4a protein_coding protein_coding MGP_129S1SvImJ_T0052362.1 MGP_129S1SvImJ_G0025313.1 mouse_genomes_project 2 1442397 1474918 + Frmd4a protein_coding retained_intron MGP_129S1SvImJ_T0052363.1 MGP_129S1SvImJ_G0025313.1 mouse_genomes_project 2 1442431 1584297 + Frmd4a protein_coding retained_intron MGP_129S1SvImJ_T0052364.1 MGP_129S1SvImJ_G0025313.1 mouse_genomes_project 2 1464407 1667083 + MGP_129S1SvImJ_P0052364 Frmd4a protein_coding protein_coding MGP_129S1SvImJ_T0052365.1 MGP_129S1SvImJ_G0025313.1 mouse_genomes_project 2 1518631 1543636 + Frmd4a protein_coding retained_intron MGP_129S1SvImJ_T0052366.1 MGP_129S1SvImJ_G0025313.1 mouse_genomes_project 2 1611548 1649738 + Frmd4a protein_coding retained_intron MGP_129S1SvImJ_T0052367.1 MGP_129S1SvImJ_G0025313.1 mouse_genomes_project 2 1611569 1639962 + Frmd4a protein_coding retained_intron MGP_129S1SvImJ_T0052368.1 MGP_129S1SvImJ_G0025313.1 mouse_genomes_project 2 1617976 1646453 + MGP_129S1SvImJ_P0052368 Frmd4a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0010416.1 MGP_129S1SvImJ_G0008532.1 mouse_genomes_project 2 30764028 30764138 + Mir199b miRNA miRNA MGP_129S1SvImJ_T0013521.1 MGP_129S1SvImJ_G0011610.1 mouse_genomes_project 2 39009270 39009637 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013665.1 MGP_129S1SvImJ_G0011754.1 mouse_genomes_project 2 88624226 88624950 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007147.1 MGP_129S1SvImJ_G0005866.1 mouse_genomes_project 2 8707363 8711858 - Gm38171 lincRNA lincRNA MGP_129S1SvImJ_T0013451.1 MGP_129S1SvImJ_G0011540.1 mouse_genomes_project 2 14785607 14786413 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100982.1 MGP_129S1SvImJ_G0039049.1 mouse_genomes_project 2 155528730 155528865 - Gm24199 snoRNA snoRNA MGP_129S1SvImJ_T0057882.1 MGP_129S1SvImJ_G0026548.1 mouse_genomes_project 2 136475998 136495311 + MGP_129S1SvImJ_P0057882 Crls1 protein_coding protein_coding MGP_129S1SvImJ_T0057883.1 MGP_129S1SvImJ_G0026548.1 mouse_genomes_project 2 136476010 136497957 + MGP_129S1SvImJ_P0057883 Crls1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057884.1 MGP_129S1SvImJ_G0026548.1 mouse_genomes_project 2 136476139 136497952 + MGP_129S1SvImJ_P0057884 Crls1 protein_coding protein_coding MGP_129S1SvImJ_T0057885.1 MGP_129S1SvImJ_G0026548.1 mouse_genomes_project 2 136477060 136497063 + MGP_129S1SvImJ_P0057885 Crls1 protein_coding protein_coding MGP_129S1SvImJ_T0010439.1 MGP_129S1SvImJ_G0008555.1 mouse_genomes_project 2 76022855 76022929 + Gm24574 miRNA miRNA MGP_129S1SvImJ_T0053450.1 MGP_129S1SvImJ_G0025503.1 mouse_genomes_project 2 24905761 24916359 + MGP_129S1SvImJ_P0053450 Stkld1 protein_coding protein_coding MGP_129S1SvImJ_T0053451.1 MGP_129S1SvImJ_G0025503.1 mouse_genomes_project 2 24905783 24926631 + MGP_129S1SvImJ_P0053451 Stkld1 protein_coding protein_coding MGP_129S1SvImJ_T0053452.1 MGP_129S1SvImJ_G0025503.1 mouse_genomes_project 2 24907037 24926526 + MGP_129S1SvImJ_P0053452 Stkld1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0055952.1 MGP_129S1SvImJ_G0026126.1 mouse_genomes_project 2 91491443 91492370 - MGP_129S1SvImJ_P0055952 Olfr1272 protein_coding protein_coding MGP_129S1SvImJ_T0055875.1 MGP_129S1SvImJ_G0026069.1 mouse_genomes_project 2 89992737 89995050 + MGP_129S1SvImJ_P0055875 Olfr1205 protein_coding protein_coding MGP_129S1SvImJ_T0007160.1 MGP_129S1SvImJ_G0005876.1 mouse_genomes_project 2 22121217 22121750 + Gm13411 lincRNA lincRNA MGP_129S1SvImJ_T0004167.1 MGP_129S1SvImJ_G0003687.1 mouse_genomes_project 2 168819196 168820245 + 2310001K24Rik antisense antisense MGP_129S1SvImJ_T0004168.1 MGP_129S1SvImJ_G0003687.1 mouse_genomes_project 2 168819784 168820243 + 2310001K24Rik antisense antisense MGP_129S1SvImJ_T0056244.1 MGP_129S1SvImJ_G0026168.1 mouse_genomes_project 2 93834282 93864666 - MGP_129S1SvImJ_P0056244 Cry2 protein_coding protein_coding MGP_129S1SvImJ_T0056245.1 MGP_129S1SvImJ_G0026168.1 mouse_genomes_project 2 93841896 93864659 - MGP_129S1SvImJ_P0056245 Cry2 protein_coding protein_coding MGP_129S1SvImJ_T0056246.1 MGP_129S1SvImJ_G0026168.1 mouse_genomes_project 2 93855790 93864659 - Cry2 protein_coding processed_transcript MGP_129S1SvImJ_T0056247.1 MGP_129S1SvImJ_G0026168.1 mouse_genomes_project 2 93857540 93863015 - Cry2 protein_coding processed_transcript MGP_129S1SvImJ_T0017828.1 MGP_129S1SvImJ_G0015436.1 mouse_genomes_project 2 88132040 88136336 - Gm13734 processed_transcript processed_transcript MGP_129S1SvImJ_T0007405.1 MGP_129S1SvImJ_G0006076.1 mouse_genomes_project 2 173461348 173500422 + A530013C23Rik lincRNA lincRNA MGP_129S1SvImJ_T0007406.1 MGP_129S1SvImJ_G0006076.1 mouse_genomes_project 2 173461352 173467957 + A530013C23Rik lincRNA lincRNA MGP_129S1SvImJ_T0052693.1 MGP_129S1SvImJ_G0025366.1 mouse_genomes_project 2 12600905 12633954 + MGP_129S1SvImJ_P0052693 Arl5b protein_coding protein_coding MGP_129S1SvImJ_T0052695.1 MGP_129S1SvImJ_G0025366.1 mouse_genomes_project 2 12606750 12633958 + MGP_129S1SvImJ_P0052695 Arl5b protein_coding protein_coding MGP_129S1SvImJ_T0052696.1 MGP_129S1SvImJ_G0025366.1 mouse_genomes_project 2 12606797 12628105 + MGP_129S1SvImJ_P0052696 Arl5b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052697.1 MGP_129S1SvImJ_G0025366.1 mouse_genomes_project 2 12606857 12629073 + MGP_129S1SvImJ_P0052697 Arl5b protein_coding protein_coding MGP_129S1SvImJ_T0052698.1 MGP_129S1SvImJ_G0025366.1 mouse_genomes_project 2 12619648 12628115 + MGP_129S1SvImJ_P0052698 Arl5b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052699.1 MGP_129S1SvImJ_G0025366.1 mouse_genomes_project 2 12621471 12624681 + Arl5b protein_coding retained_intron MGP_129S1SvImJ_T0052700.1 MGP_129S1SvImJ_G0025366.1 mouse_genomes_project 2 12626508 12633954 + MGP_129S1SvImJ_P0052700 Arl5b protein_coding protein_coding MGP_129S1SvImJ_T0013790.1 MGP_129S1SvImJ_G0011879.1 mouse_genomes_project 2 140193101 140193805 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055851.1 MGP_129S1SvImJ_G0026046.1 mouse_genomes_project 2 89258095 89259034 + MGP_129S1SvImJ_P0055851 Olfr1173 protein_coding protein_coding MGP_129S1SvImJ_T0058658.1 MGP_129S1SvImJ_G0026752.1 mouse_genomes_project 2 160865818 160875930 + MGP_129S1SvImJ_P0058658 Ergic3 protein_coding protein_coding MGP_129S1SvImJ_T0058659.1 MGP_129S1SvImJ_G0026752.1 mouse_genomes_project 2 160865879 160875930 + MGP_129S1SvImJ_P0058659 Ergic3 protein_coding protein_coding MGP_129S1SvImJ_T0058660.1 MGP_129S1SvImJ_G0026752.1 mouse_genomes_project 2 160865996 160868996 + Ergic3 protein_coding retained_intron MGP_129S1SvImJ_T0058661.1 MGP_129S1SvImJ_G0026752.1 mouse_genomes_project 2 160866392 160875289 + MGP_129S1SvImJ_P0058661 Ergic3 protein_coding protein_coding MGP_129S1SvImJ_T0058662.1 MGP_129S1SvImJ_G0026752.1 mouse_genomes_project 2 160868211 160875738 + MGP_129S1SvImJ_P0058662 Ergic3 protein_coding protein_coding MGP_129S1SvImJ_T0058663.1 MGP_129S1SvImJ_G0026752.1 mouse_genomes_project 2 160874159 160875801 + Ergic3 protein_coding processed_transcript MGP_129S1SvImJ_T0058664.1 MGP_129S1SvImJ_G0026752.1 mouse_genomes_project 2 160874865 160875747 + Ergic3 protein_coding processed_transcript MGP_129S1SvImJ_T0058665.1 MGP_129S1SvImJ_G0026752.1 mouse_genomes_project 2 160875144 160875930 + Ergic3 protein_coding retained_intron MGP_129S1SvImJ_T0058666.1 MGP_129S1SvImJ_G0026752.1 mouse_genomes_project 2 160875196 160875930 + Ergic3 protein_coding retained_intron MGP_129S1SvImJ_T0058667.1 MGP_129S1SvImJ_G0026752.1 mouse_genomes_project 2 160875298 160875928 + Ergic3 protein_coding retained_intron MGP_129S1SvImJ_T0013758.1 MGP_129S1SvImJ_G0011847.1 mouse_genomes_project 2 125196218 125196564 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003961.1 MGP_129S1SvImJ_G0003536.1 mouse_genomes_project 2 28640102 28641725 + Gm16323 antisense antisense MGP_129S1SvImJ_T0010496.1 MGP_129S1SvImJ_G0008612.1 mouse_genomes_project 2 174007698 174007795 - Gm24561 miRNA miRNA MGP_129S1SvImJ_T0057572.1 MGP_129S1SvImJ_G0026479.1 mouse_genomes_project 2 132333814 132334947 - MGP_129S1SvImJ_P0057572 Gm10762 protein_coding protein_coding MGP_129S1SvImJ_T0101674.1 MGP_129S1SvImJ_G0039695.1 mouse_genomes_project 2 114431893 114433018 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0100929.1 MGP_129S1SvImJ_G0038996.1 mouse_genomes_project 2 31327723 31327851 + Gm24165 snoRNA snoRNA MGP_129S1SvImJ_T0013901.1 MGP_129S1SvImJ_G0011990.1 mouse_genomes_project 2 185824522 185825273 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013768.1 MGP_129S1SvImJ_G0011857.1 mouse_genomes_project 2 132326949 132327428 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053763.1 MGP_129S1SvImJ_G0025556.1 mouse_genomes_project 2 28392541 28395118 + MGP_129S1SvImJ_P0053763 Endog protein_coding protein_coding MGP_129S1SvImJ_T0053902.1 MGP_129S1SvImJ_G0025576.1 mouse_genomes_project 2 29180604 29194435 - MGP_129S1SvImJ_P0053902 Ptges protein_coding protein_coding MGP_129S1SvImJ_T0053903.1 MGP_129S1SvImJ_G0025576.1 mouse_genomes_project 2 29183415 29192922 - Ptges protein_coding processed_transcript MGP_129S1SvImJ_T0053904.1 MGP_129S1SvImJ_G0025576.1 mouse_genomes_project 2 29183429 29218901 - Ptges protein_coding processed_transcript MGP_129S1SvImJ_T0053905.1 MGP_129S1SvImJ_G0025576.1 mouse_genomes_project 2 29183621 29188603 - Ptges protein_coding processed_transcript MGP_129S1SvImJ_T0010410.1 MGP_129S1SvImJ_G0008526.1 mouse_genomes_project 2 28593062 28593158 + miRNA miRNA MGP_129S1SvImJ_T0054827.1 MGP_129S1SvImJ_G0025746.1 mouse_genomes_project 2 57581209 57590011 - MGP_129S1SvImJ_P0054827 Ermn protein_coding protein_coding MGP_129S1SvImJ_T0058162.1 MGP_129S1SvImJ_G0026621.1 mouse_genomes_project 2 153381172 153382103 - MGP_129S1SvImJ_P0058162 Gm10750 protein_coding protein_coding MGP_129S1SvImJ_T0053424.1 MGP_129S1SvImJ_G0025499.1 mouse_genomes_project 2 24882406 24884961 + MGP_129S1SvImJ_P0053424 Rpl7a protein_coding protein_coding MGP_129S1SvImJ_T0053425.1 MGP_129S1SvImJ_G0025499.1 mouse_genomes_project 2 24882459 24884700 + Rpl7a protein_coding processed_transcript MGP_129S1SvImJ_T0053426.1 MGP_129S1SvImJ_G0025499.1 mouse_genomes_project 2 24882463 24884961 + Rpl7a protein_coding processed_transcript MGP_129S1SvImJ_T0053427.1 MGP_129S1SvImJ_G0025499.1 mouse_genomes_project 2 24882648 24884961 + Rpl7a protein_coding processed_transcript MGP_129S1SvImJ_T0053428.1 MGP_129S1SvImJ_G0025499.1 mouse_genomes_project 2 24883834 24884961 + Rpl7a protein_coding processed_transcript MGP_129S1SvImJ_T0053429.1 MGP_129S1SvImJ_G0025499.1 mouse_genomes_project 2 24884261 24884961 + Rpl7a protein_coding processed_transcript MGP_129S1SvImJ_T0053430.1 MGP_129S1SvImJ_G0025499.1 mouse_genomes_project 2 24884313 24884855 + Rpl7a protein_coding processed_transcript MGP_129S1SvImJ_T0056573.1 MGP_129S1SvImJ_G0026234.1 mouse_genomes_project 2 108918346 109102572 + MGP_129S1SvImJ_P0056573 Mpped2 protein_coding protein_coding MGP_129S1SvImJ_T0056574.1 MGP_129S1SvImJ_G0026234.1 mouse_genomes_project 2 108920298 108973242 + MGP_129S1SvImJ_P0056574 Mpped2 protein_coding protein_coding MGP_129S1SvImJ_T0056575.1 MGP_129S1SvImJ_G0026234.1 mouse_genomes_project 2 108920679 109101422 + MGP_129S1SvImJ_P0056575 Mpped2 protein_coding protein_coding MGP_129S1SvImJ_T0056576.1 MGP_129S1SvImJ_G0026234.1 mouse_genomes_project 2 108920701 109013822 + Mpped2 protein_coding processed_transcript MGP_129S1SvImJ_T0056577.1 MGP_129S1SvImJ_G0026234.1 mouse_genomes_project 2 108920932 109101251 + MGP_129S1SvImJ_P0056577 Mpped2 protein_coding protein_coding MGP_129S1SvImJ_T0056578.1 MGP_129S1SvImJ_G0026234.1 mouse_genomes_project 2 108957021 109013941 + Mpped2 protein_coding processed_transcript MGP_129S1SvImJ_T0007186.1 MGP_129S1SvImJ_G0005895.1 mouse_genomes_project 2 32570119 32666368 - C230014O12Rik lincRNA lincRNA MGP_129S1SvImJ_T0007188.1 MGP_129S1SvImJ_G0005895.1 mouse_genomes_project 2 32658682 32666374 - C230014O12Rik lincRNA lincRNA MGP_129S1SvImJ_T0058149.1 MGP_129S1SvImJ_G0026614.1 mouse_genomes_project 2 153130959 153134888 + MGP_129S1SvImJ_P0058149 8030411F24Rik protein_coding protein_coding MGP_129S1SvImJ_T0007381.1 MGP_129S1SvImJ_G0006054.1 mouse_genomes_project 2 163432605 163432737 - Gm23925 lincRNA lincRNA MGP_129S1SvImJ_T0007221.1 MGP_129S1SvImJ_G0005924.1 mouse_genomes_project 2 64146970 64159158 - Gm13575 lincRNA lincRNA MGP_129S1SvImJ_T0100984.1 MGP_129S1SvImJ_G0039051.1 mouse_genomes_project 2 155768086 155768221 + snoRNA snoRNA MGP_129S1SvImJ_T0053257.1 MGP_129S1SvImJ_G0025473.1 mouse_genomes_project 2 23768300 23772554 - MGP_129S1SvImJ_P0053257 Sohlh1 protein_coding protein_coding MGP_129S1SvImJ_T0054533.1 MGP_129S1SvImJ_G0025697.1 mouse_genomes_project 2 36181137 36357705 - MGP_129S1SvImJ_P0054533 Strbp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054539.1 MGP_129S1SvImJ_G0025697.1 mouse_genomes_project 2 36271257 36357771 - MGP_129S1SvImJ_P0054539 Strbp protein_coding protein_coding MGP_129S1SvImJ_T0054540.1 MGP_129S1SvImJ_G0025697.1 mouse_genomes_project 2 36271410 36296348 - Strbp protein_coding processed_transcript MGP_129S1SvImJ_T0054541.1 MGP_129S1SvImJ_G0025697.1 mouse_genomes_project 2 36280956 36287922 - MGP_129S1SvImJ_P0054541 Strbp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054542.1 MGP_129S1SvImJ_G0025697.1 mouse_genomes_project 2 36284573 36417074 - MGP_129S1SvImJ_P0054542 Strbp protein_coding protein_coding MGP_129S1SvImJ_T0054543.1 MGP_129S1SvImJ_G0025697.1 mouse_genomes_project 2 36343233 36417147 - Strbp protein_coding processed_transcript MGP_129S1SvImJ_T0054544.1 MGP_129S1SvImJ_G0025697.1 mouse_genomes_project 2 36343762 36369918 - MGP_129S1SvImJ_P0054544 Strbp protein_coding protein_coding MGP_129S1SvImJ_T0054545.1 MGP_129S1SvImJ_G0025697.1 mouse_genomes_project 2 36349956 36417658 - MGP_129S1SvImJ_P0054545 Strbp protein_coding protein_coding MGP_129S1SvImJ_T0054546.1 MGP_129S1SvImJ_G0025697.1 mouse_genomes_project 2 36357605 36416948 - Strbp protein_coding processed_transcript MGP_129S1SvImJ_T0054509.1 MGP_129S1SvImJ_G0025692.1 mouse_genomes_project 2 36030396 36042911 - MGP_129S1SvImJ_P0054509 Pdcl protein_coding protein_coding MGP_129S1SvImJ_T0054510.1 MGP_129S1SvImJ_G0025692.1 mouse_genomes_project 2 36030910 36042832 - MGP_129S1SvImJ_P0054510 Pdcl protein_coding protein_coding MGP_129S1SvImJ_T0054511.1 MGP_129S1SvImJ_G0025692.1 mouse_genomes_project 2 36032441 36042768 - MGP_129S1SvImJ_P0054511 Pdcl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054512.1 MGP_129S1SvImJ_G0025692.1 mouse_genomes_project 2 36032480 36042775 - MGP_129S1SvImJ_P0054512 Pdcl protein_coding protein_coding MGP_129S1SvImJ_T0013455.1 MGP_129S1SvImJ_G0011544.1 mouse_genomes_project 2 15943983 15944462 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054719.1 MGP_129S1SvImJ_G0025723.1 mouse_genomes_project 2 48799622 48969787 + MGP_129S1SvImJ_P0054719 Kif5c protein_coding protein_coding MGP_129S1SvImJ_T0054720.1 MGP_129S1SvImJ_G0025723.1 mouse_genomes_project 2 48892129 48924109 + MGP_129S1SvImJ_P0054720 Kif5c protein_coding protein_coding MGP_129S1SvImJ_T0054721.1 MGP_129S1SvImJ_G0025723.1 mouse_genomes_project 2 48915135 48929445 + Kif5c protein_coding processed_transcript MGP_129S1SvImJ_T0054722.1 MGP_129S1SvImJ_G0025723.1 mouse_genomes_project 2 48926469 48929436 + Kif5c protein_coding processed_transcript MGP_129S1SvImJ_T0054723.1 MGP_129S1SvImJ_G0025723.1 mouse_genomes_project 2 48938389 48951258 + Kif5c protein_coding processed_transcript MGP_129S1SvImJ_T0054724.1 MGP_129S1SvImJ_G0025723.1 mouse_genomes_project 2 48946059 48952771 + Kif5c protein_coding processed_transcript MGP_129S1SvImJ_T0017808.1 MGP_129S1SvImJ_G0015419.1 mouse_genomes_project 2 56617317 56677784 - BB557941 processed_transcript processed_transcript MGP_129S1SvImJ_T0017826.1 MGP_129S1SvImJ_G0015434.1 mouse_genomes_project 2 85784126 85791418 - processed_transcript processed_transcript MGP_129S1SvImJ_T0100937.1 MGP_129S1SvImJ_G0039004.1 mouse_genomes_project 2 45755340 45755457 - Gm25264 snoRNA snoRNA MGP_129S1SvImJ_T0098849.1 MGP_129S1SvImJ_G0036928.1 mouse_genomes_project 2 315301 319619 - Gm37525 sense_intronic sense_intronic MGP_129S1SvImJ_T0010367.1 MGP_129S1SvImJ_G0008483.1 mouse_genomes_project 2 7862166 7862293 + Gm26398 miRNA miRNA MGP_129S1SvImJ_T0007341.1 MGP_129S1SvImJ_G0006020.1 mouse_genomes_project 2 137087167 137113062 + A430048G15Rik lincRNA lincRNA MGP_129S1SvImJ_T0053372.1 MGP_129S1SvImJ_G0025490.1 mouse_genomes_project 2 24412349 24461881 - MGP_129S1SvImJ_P0053372 Notch1 protein_coding protein_coding MGP_129S1SvImJ_T0053373.1 MGP_129S1SvImJ_G0025490.1 mouse_genomes_project 2 24416664 24417194 - Notch1 protein_coding processed_transcript MGP_129S1SvImJ_T0053374.1 MGP_129S1SvImJ_G0025490.1 mouse_genomes_project 2 24419917 24422060 - Notch1 protein_coding processed_transcript MGP_129S1SvImJ_T0053375.1 MGP_129S1SvImJ_G0025490.1 mouse_genomes_project 2 24419917 24421101 - Notch1 protein_coding processed_transcript MGP_129S1SvImJ_T0053376.1 MGP_129S1SvImJ_G0025490.1 mouse_genomes_project 2 24419917 24421241 - Notch1 protein_coding processed_transcript MGP_129S1SvImJ_T0053377.1 MGP_129S1SvImJ_G0025490.1 mouse_genomes_project 2 24419917 24420814 - Notch1 protein_coding processed_transcript MGP_129S1SvImJ_T0053378.1 MGP_129S1SvImJ_G0025490.1 mouse_genomes_project 2 24419917 24420610 - Notch1 protein_coding processed_transcript MGP_129S1SvImJ_T0053379.1 MGP_129S1SvImJ_G0025490.1 mouse_genomes_project 2 24422989 24424196 - Notch1 protein_coding processed_transcript MGP_129S1SvImJ_T0053380.1 MGP_129S1SvImJ_G0025490.1 mouse_genomes_project 2 24424271 24424945 - Notch1 protein_coding processed_transcript MGP_129S1SvImJ_T0053381.1 MGP_129S1SvImJ_G0025490.1 mouse_genomes_project 2 24425722 24474919 - MGP_129S1SvImJ_P0053381 Notch1 protein_coding protein_coding MGP_129S1SvImJ_T0053382.1 MGP_129S1SvImJ_G0025490.1 mouse_genomes_project 2 24456211 24461883 - Notch1 protein_coding retained_intron MGP_129S1SvImJ_T0013875.1 MGP_129S1SvImJ_G0011964.1 mouse_genomes_project 2 171234219 171234580 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054787.1 MGP_129S1SvImJ_G0025736.1 mouse_genomes_project 2 52052451 52104635 - MGP_129S1SvImJ_P0054787 Stam2 protein_coding protein_coding MGP_129S1SvImJ_T0054788.1 MGP_129S1SvImJ_G0025736.1 mouse_genomes_project 2 52058615 52104716 - MGP_129S1SvImJ_P0054788 Stam2 protein_coding protein_coding MGP_129S1SvImJ_T0054789.1 MGP_129S1SvImJ_G0025736.1 mouse_genomes_project 2 52068512 52104615 - Stam2 protein_coding retained_intron MGP_129S1SvImJ_T0054790.1 MGP_129S1SvImJ_G0025736.1 mouse_genomes_project 2 52068794 52104625 - MGP_129S1SvImJ_P0054790 Stam2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054791.1 MGP_129S1SvImJ_G0025736.1 mouse_genomes_project 2 52077874 52104591 - MGP_129S1SvImJ_P0054791 Stam2 protein_coding protein_coding MGP_129S1SvImJ_T0001106.1 MGP_129S1SvImJ_G0001035.1 mouse_genomes_project 2 68910668 68914907 + TEC TEC MGP_129S1SvImJ_T0017841.1 MGP_129S1SvImJ_G0015443.1 mouse_genomes_project 2 92503764 92511874 - Gm13783 processed_transcript processed_transcript MGP_129S1SvImJ_T0013763.1 MGP_129S1SvImJ_G0011852.1 mouse_genomes_project 2 130887095 130896506 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003946.1 MGP_129S1SvImJ_G0003526.1 mouse_genomes_project 2 24330862 24336595 + Gm13563 antisense antisense MGP_129S1SvImJ_T0003947.1 MGP_129S1SvImJ_G0003526.1 mouse_genomes_project 2 24334888 24337131 + Gm13563 antisense antisense MGP_129S1SvImJ_T0003948.1 MGP_129S1SvImJ_G0003526.1 mouse_genomes_project 2 24336793 24338355 + Gm13563 antisense antisense MGP_129S1SvImJ_T0013780.1 MGP_129S1SvImJ_G0011869.1 mouse_genomes_project 2 135397113 135398407 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058333.1 MGP_129S1SvImJ_G0026677.1 mouse_genomes_project 2 157333329 157344228 + MGP_129S1SvImJ_P0058333 Cox4i2 protein_coding protein_coding MGP_129S1SvImJ_T0058334.1 MGP_129S1SvImJ_G0026677.1 mouse_genomes_project 2 157334250 157344225 + MGP_129S1SvImJ_P0058334 Cox4i2 protein_coding protein_coding MGP_129S1SvImJ_T0013452.1 MGP_129S1SvImJ_G0011541.1 mouse_genomes_project 2 15439899 15441050 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058903.1 MGP_129S1SvImJ_G0026789.1 mouse_genomes_project 2 163172010 163201969 - MGP_129S1SvImJ_P0058903 Tgm2 protein_coding protein_coding MGP_129S1SvImJ_T0058904.1 MGP_129S1SvImJ_G0026789.1 mouse_genomes_project 2 163182906 163201926 - MGP_129S1SvImJ_P0058904 Tgm2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058905.1 MGP_129S1SvImJ_G0026789.1 mouse_genomes_project 2 163185940 163201899 - Tgm2 protein_coding retained_intron MGP_129S1SvImJ_T0058906.1 MGP_129S1SvImJ_G0026789.1 mouse_genomes_project 2 163189882 163195267 - Tgm2 protein_coding processed_transcript MGP_129S1SvImJ_T0055082.1 MGP_129S1SvImJ_G0025788.1 mouse_genomes_project 2 67321101 67398380 + MGP_129S1SvImJ_P0055082 Xirp2 protein_coding protein_coding MGP_129S1SvImJ_T0055083.1 MGP_129S1SvImJ_G0025788.1 mouse_genomes_project 2 67321101 67398388 + MGP_129S1SvImJ_P0055083 Xirp2 protein_coding protein_coding MGP_129S1SvImJ_T0059822.1 MGP_129S1SvImJ_G0027016.1 mouse_genomes_project 2 187804228 187818648 - MGP_129S1SvImJ_P0059822 Helz2 protein_coding protein_coding MGP_129S1SvImJ_T0059823.1 MGP_129S1SvImJ_G0027016.1 mouse_genomes_project 2 187804229 187818646 - MGP_129S1SvImJ_P0059823 Helz2 protein_coding protein_coding MGP_129S1SvImJ_T0059824.1 MGP_129S1SvImJ_G0027016.1 mouse_genomes_project 2 187804232 187818584 - MGP_129S1SvImJ_P0059824 Helz2 protein_coding protein_coding MGP_129S1SvImJ_T0059825.1 MGP_129S1SvImJ_G0027016.1 mouse_genomes_project 2 187804235 187812389 - Helz2 protein_coding retained_intron MGP_129S1SvImJ_T0059826.1 MGP_129S1SvImJ_G0027016.1 mouse_genomes_project 2 187813791 187818646 - Helz2 protein_coding retained_intron MGP_129S1SvImJ_T0007444.1 MGP_129S1SvImJ_G0006110.1 mouse_genomes_project 2 187409526 187413365 + lincRNA lincRNA MGP_129S1SvImJ_T0099671.1 MGP_129S1SvImJ_G0037738.1 mouse_genomes_project 2 43452410 43452519 + Gm22867 snRNA snRNA MGP_129S1SvImJ_T0007217.1 MGP_129S1SvImJ_G0005920.1 mouse_genomes_project 2 59699247 59699971 + Gm13620 lincRNA lincRNA MGP_129S1SvImJ_T0053646.1 MGP_129S1SvImJ_G0025542.1 mouse_genomes_project 2 27926894 27959504 - MGP_129S1SvImJ_P0053646 Trub2 protein_coding protein_coding MGP_129S1SvImJ_T0053649.1 MGP_129S1SvImJ_G0025542.1 mouse_genomes_project 2 27941945 27959516 - MGP_129S1SvImJ_P0053649 Trub2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053650.1 MGP_129S1SvImJ_G0025542.1 mouse_genomes_project 2 27943339 27960358 - MGP_129S1SvImJ_P0053650 Trub2 protein_coding protein_coding MGP_129S1SvImJ_T0053651.1 MGP_129S1SvImJ_G0025542.1 mouse_genomes_project 2 27948298 27959490 - MGP_129S1SvImJ_P0053651 Trub2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053652.1 MGP_129S1SvImJ_G0025542.1 mouse_genomes_project 2 27948367 27959478 - MGP_129S1SvImJ_P0053652 Trub2 protein_coding protein_coding MGP_129S1SvImJ_T0053653.1 MGP_129S1SvImJ_G0025542.1 mouse_genomes_project 2 27949204 27959527 - MGP_129S1SvImJ_P0053653 Trub2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053654.1 MGP_129S1SvImJ_G0025542.1 mouse_genomes_project 2 27949363 27954204 - Trub2 protein_coding retained_intron MGP_129S1SvImJ_T0053655.1 MGP_129S1SvImJ_G0025542.1 mouse_genomes_project 2 27949817 27954058 - Trub2 protein_coding retained_intron MGP_129S1SvImJ_T0053656.1 MGP_129S1SvImJ_G0025542.1 mouse_genomes_project 2 27955080 27959486 - Trub2 protein_coding retained_intron MGP_129S1SvImJ_T0053657.1 MGP_129S1SvImJ_G0025542.1 mouse_genomes_project 2 27956779 27959489 - Trub2 protein_coding retained_intron MGP_129S1SvImJ_T0055741.1 MGP_129S1SvImJ_G0025949.1 mouse_genomes_project 2 86777722 86778733 + MGP_129S1SvImJ_P0055741 Olfr1031 protein_coding protein_coding MGP_129S1SvImJ_T0007136.1 MGP_129S1SvImJ_G0005858.1 mouse_genomes_project 2 3640376 3646875 + Gm13391 lincRNA lincRNA MGP_129S1SvImJ_T0007137.1 MGP_129S1SvImJ_G0005858.1 mouse_genomes_project 2 3640647 3641488 + Gm13391 lincRNA lincRNA MGP_129S1SvImJ_T0055714.1 MGP_129S1SvImJ_G0025924.1 mouse_genomes_project 2 86151039 86151969 - MGP_129S1SvImJ_P0055714 Olfr992 protein_coding protein_coding MGP_129S1SvImJ_T0017922.1 MGP_129S1SvImJ_G0015480.1 mouse_genomes_project 2 161516510 161520710 - Gm14169 processed_transcript processed_transcript MGP_129S1SvImJ_T0013460.1 MGP_129S1SvImJ_G0011549.1 mouse_genomes_project 2 16832360 16833758 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055639.1 MGP_129S1SvImJ_G0025903.1 mouse_genomes_project 2 85351748 85353304 - MGP_129S1SvImJ_P0055639 2700094K13Rik protein_coding protein_coding MGP_129S1SvImJ_T0055640.1 MGP_129S1SvImJ_G0025903.1 mouse_genomes_project 2 85351754 85353242 - MGP_129S1SvImJ_P0055640 2700094K13Rik protein_coding protein_coding MGP_129S1SvImJ_T0055641.1 MGP_129S1SvImJ_G0025903.1 mouse_genomes_project 2 85351840 85353210 - MGP_129S1SvImJ_P0055641 2700094K13Rik protein_coding protein_coding MGP_129S1SvImJ_T0055642.1 MGP_129S1SvImJ_G0025903.1 mouse_genomes_project 2 85352228 85353231 - MGP_129S1SvImJ_P0055642 2700094K13Rik protein_coding protein_coding MGP_129S1SvImJ_T0055643.1 MGP_129S1SvImJ_G0025903.1 mouse_genomes_project 2 85352483 85353210 - 2700094K13Rik protein_coding retained_intron MGP_129S1SvImJ_T0055644.1 MGP_129S1SvImJ_G0025903.1 mouse_genomes_project 2 85352550 85353188 - MGP_129S1SvImJ_P0055644 2700094K13Rik protein_coding protein_coding MGP_129S1SvImJ_T0052836.1 MGP_129S1SvImJ_G0025390.1 mouse_genomes_project 2 20051631 20327105 + MGP_129S1SvImJ_P0052836 Myo3a protein_coding protein_coding MGP_129S1SvImJ_T0052837.1 MGP_129S1SvImJ_G0025390.1 mouse_genomes_project 2 20051633 20124408 + Myo3a protein_coding processed_transcript MGP_129S1SvImJ_T0052838.1 MGP_129S1SvImJ_G0025390.1 mouse_genomes_project 2 20051633 20115109 + Myo3a protein_coding processed_transcript MGP_129S1SvImJ_T0052839.1 MGP_129S1SvImJ_G0025390.1 mouse_genomes_project 2 20065186 20225742 + MGP_129S1SvImJ_P0052839 Myo3a protein_coding protein_coding MGP_129S1SvImJ_T0052840.1 MGP_129S1SvImJ_G0025390.1 mouse_genomes_project 2 20260631 20327100 + MGP_129S1SvImJ_P0052840 Myo3a protein_coding protein_coding MGP_129S1SvImJ_T0052841.1 MGP_129S1SvImJ_G0025390.1 mouse_genomes_project 2 20285578 20314582 + Myo3a protein_coding processed_transcript MGP_129S1SvImJ_T0055189.1 MGP_129S1SvImJ_G0025812.1 mouse_genomes_project 2 70556809 70590390 + MGP_129S1SvImJ_P0055189 Erich2 protein_coding protein_coding MGP_129S1SvImJ_T0055190.1 MGP_129S1SvImJ_G0025812.1 mouse_genomes_project 2 70556821 70590390 + MGP_129S1SvImJ_P0055190 Erich2 protein_coding protein_coding MGP_129S1SvImJ_T0055191.1 MGP_129S1SvImJ_G0025812.1 mouse_genomes_project 2 70557450 70586755 + Erich2 protein_coding retained_intron MGP_129S1SvImJ_T0055192.1 MGP_129S1SvImJ_G0025812.1 mouse_genomes_project 2 70557450 70573155 + Erich2 protein_coding retained_intron MGP_129S1SvImJ_T0055193.1 MGP_129S1SvImJ_G0025812.1 mouse_genomes_project 2 70557487 70576981 + MGP_129S1SvImJ_P0055193 Erich2 protein_coding protein_coding MGP_129S1SvImJ_T0013585.1 MGP_129S1SvImJ_G0011674.1 mouse_genomes_project 2 64628669 64629252 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054734.1 MGP_129S1SvImJ_G0025726.1 mouse_genomes_project 2 49509452 49526247 - Mmadhc protein_coding processed_transcript MGP_129S1SvImJ_T0054735.1 MGP_129S1SvImJ_G0025726.1 mouse_genomes_project 2 49509452 49526269 - MGP_129S1SvImJ_P0054735 Mmadhc protein_coding protein_coding MGP_129S1SvImJ_T0054736.1 MGP_129S1SvImJ_G0025726.1 mouse_genomes_project 2 49509920 49526239 - Mmadhc protein_coding processed_transcript MGP_129S1SvImJ_T0054737.1 MGP_129S1SvImJ_G0025726.1 mouse_genomes_project 2 49510711 49526233 - MGP_129S1SvImJ_P0054737 Mmadhc protein_coding protein_coding MGP_129S1SvImJ_T0054738.1 MGP_129S1SvImJ_G0025726.1 mouse_genomes_project 2 49510724 49525976 - Mmadhc protein_coding processed_transcript MGP_129S1SvImJ_T0054739.1 MGP_129S1SvImJ_G0025726.1 mouse_genomes_project 2 49510736 49518758 - Mmadhc protein_coding processed_transcript MGP_129S1SvImJ_T0054740.1 MGP_129S1SvImJ_G0025726.1 mouse_genomes_project 2 49517411 49526228 - Mmadhc protein_coding processed_transcript MGP_129S1SvImJ_T0054741.1 MGP_129S1SvImJ_G0025726.1 mouse_genomes_project 2 49517424 49526353 - MGP_129S1SvImJ_P0054741 Mmadhc protein_coding protein_coding MGP_129S1SvImJ_T0059885.1 MGP_129S1SvImJ_G0027025.1 mouse_genomes_project 2 188090854 188092629 + MGP_129S1SvImJ_P0059885 Abhd16b protein_coding protein_coding MGP_129S1SvImJ_T0001054.1 MGP_129S1SvImJ_G0000983.1 mouse_genomes_project 2 8773600 8774721 - TEC TEC MGP_129S1SvImJ_T0057631.1 MGP_129S1SvImJ_G0026497.1 mouse_genomes_project 2 133723165 133728055 + MGP_129S1SvImJ_P0057631 Nop56 protein_coding protein_coding MGP_129S1SvImJ_T0057632.1 MGP_129S1SvImJ_G0026497.1 mouse_genomes_project 2 133723179 133728054 + Nop56 protein_coding retained_intron MGP_129S1SvImJ_T0057633.1 MGP_129S1SvImJ_G0026497.1 mouse_genomes_project 2 133723181 133727722 + Nop56 protein_coding retained_intron MGP_129S1SvImJ_T0057634.1 MGP_129S1SvImJ_G0026497.1 mouse_genomes_project 2 133723190 133726276 + MGP_129S1SvImJ_P0057634 Nop56 protein_coding protein_coding MGP_129S1SvImJ_T0057635.1 MGP_129S1SvImJ_G0026497.1 mouse_genomes_project 2 133723209 133727169 + MGP_129S1SvImJ_P0057635 Nop56 protein_coding protein_coding MGP_129S1SvImJ_T0057636.1 MGP_129S1SvImJ_G0026497.1 mouse_genomes_project 2 133723227 133724837 + MGP_129S1SvImJ_P0057636 Nop56 protein_coding protein_coding MGP_129S1SvImJ_T0057637.1 MGP_129S1SvImJ_G0026497.1 mouse_genomes_project 2 133723566 133724435 + Nop56 protein_coding retained_intron MGP_129S1SvImJ_T0057638.1 MGP_129S1SvImJ_G0026497.1 mouse_genomes_project 2 133724534 133725005 + Nop56 protein_coding retained_intron MGP_129S1SvImJ_T0057639.1 MGP_129S1SvImJ_G0026497.1 mouse_genomes_project 2 133724897 133727702 + MGP_129S1SvImJ_P0057639 Nop56 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057640.1 MGP_129S1SvImJ_G0026497.1 mouse_genomes_project 2 133725038 133726309 + Nop56 protein_coding retained_intron MGP_129S1SvImJ_T0057641.1 MGP_129S1SvImJ_G0026497.1 mouse_genomes_project 2 133725213 133726694 + Nop56 protein_coding retained_intron MGP_129S1SvImJ_T0057642.1 MGP_129S1SvImJ_G0026497.1 mouse_genomes_project 2 133725335 133726698 + MGP_129S1SvImJ_P0057642 Nop56 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057643.1 MGP_129S1SvImJ_G0026497.1 mouse_genomes_project 2 133725403 133726021 + Nop56 protein_coding retained_intron MGP_129S1SvImJ_T0057644.1 MGP_129S1SvImJ_G0026497.1 mouse_genomes_project 2 133725827 133728049 + Nop56 protein_coding retained_intron MGP_129S1SvImJ_T0057645.1 MGP_129S1SvImJ_G0026497.1 mouse_genomes_project 2 133725895 133728020 + MGP_129S1SvImJ_P0057645 Nop56 protein_coding protein_coding MGP_129S1SvImJ_T0057646.1 MGP_129S1SvImJ_G0026497.1 mouse_genomes_project 2 133725956 133728021 + MGP_129S1SvImJ_P0057646 Nop56 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057647.1 MGP_129S1SvImJ_G0026497.1 mouse_genomes_project 2 133725960 133727202 + Nop56 protein_coding retained_intron MGP_129S1SvImJ_T0057648.1 MGP_129S1SvImJ_G0026497.1 mouse_genomes_project 2 133726053 133726969 + MGP_129S1SvImJ_P0057648 Nop56 protein_coding protein_coding MGP_129S1SvImJ_T0057649.1 MGP_129S1SvImJ_G0026497.1 mouse_genomes_project 2 133726449 133728022 + Nop56 protein_coding retained_intron MGP_129S1SvImJ_T0003919.1 MGP_129S1SvImJ_G0003505.1 mouse_genomes_project 2 9741058 9751361 + E030013I19Rik antisense antisense MGP_129S1SvImJ_T0003920.1 MGP_129S1SvImJ_G0003505.1 mouse_genomes_project 2 9741431 9752376 + E030013I19Rik antisense antisense MGP_129S1SvImJ_T0054123.1 MGP_129S1SvImJ_G0025606.1 mouse_genomes_project 2 30849518 30862629 + MGP_129S1SvImJ_P0054123 Ptges2 protein_coding protein_coding MGP_129S1SvImJ_T0054124.1 MGP_129S1SvImJ_G0025606.1 mouse_genomes_project 2 30850062 30857483 + MGP_129S1SvImJ_P0054124 Ptges2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054125.1 MGP_129S1SvImJ_G0025606.1 mouse_genomes_project 2 30851093 30858036 + Ptges2 protein_coding retained_intron MGP_129S1SvImJ_T0056900.1 MGP_129S1SvImJ_G0026344.1 mouse_genomes_project 2 122278931 122319109 - MGP_129S1SvImJ_P0056900 Exd1 protein_coding protein_coding MGP_129S1SvImJ_T0056901.1 MGP_129S1SvImJ_G0026344.1 mouse_genomes_project 2 122278937 122313187 - MGP_129S1SvImJ_P0056901 Exd1 protein_coding protein_coding MGP_129S1SvImJ_T0056902.1 MGP_129S1SvImJ_G0026344.1 mouse_genomes_project 2 122310514 122318676 - MGP_129S1SvImJ_P0056902 Exd1 protein_coding protein_coding MGP_129S1SvImJ_T0059461.1 MGP_129S1SvImJ_G0026926.1 mouse_genomes_project 2 174095472 174118024 - MGP_129S1SvImJ_P0059461 Kcng1 protein_coding protein_coding MGP_129S1SvImJ_T0059462.1 MGP_129S1SvImJ_G0026926.1 mouse_genomes_project 2 174097053 174106369 - MGP_129S1SvImJ_P0059462 Kcng1 protein_coding protein_coding MGP_129S1SvImJ_T0059463.1 MGP_129S1SvImJ_G0026926.1 mouse_genomes_project 2 174106136 174118628 - MGP_129S1SvImJ_P0059463 Kcng1 protein_coding protein_coding MGP_129S1SvImJ_T0013531.1 MGP_129S1SvImJ_G0011620.1 mouse_genomes_project 2 47288423 47288856 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053159.1 MGP_129S1SvImJ_G0025448.1 mouse_genomes_project 2 23345354 23347193 + Clic3 protein_coding processed_transcript MGP_129S1SvImJ_T0053160.1 MGP_129S1SvImJ_G0025448.1 mouse_genomes_project 2 23345354 23347293 + MGP_129S1SvImJ_P0053160 Clic3 protein_coding protein_coding MGP_129S1SvImJ_T0053161.1 MGP_129S1SvImJ_G0025448.1 mouse_genomes_project 2 23345365 23347293 + MGP_129S1SvImJ_P0053161 Clic3 protein_coding protein_coding MGP_129S1SvImJ_T0053162.1 MGP_129S1SvImJ_G0025448.1 mouse_genomes_project 2 23345407 23347293 + Clic3 protein_coding processed_transcript MGP_129S1SvImJ_T0053163.1 MGP_129S1SvImJ_G0025448.1 mouse_genomes_project 2 23345413 23347200 + Clic3 protein_coding processed_transcript MGP_129S1SvImJ_T0053164.1 MGP_129S1SvImJ_G0025448.1 mouse_genomes_project 2 23346152 23346732 + Clic3 protein_coding processed_transcript MGP_129S1SvImJ_T0059422.1 MGP_129S1SvImJ_G0026914.1 mouse_genomes_project 2 173232126 173260444 + MGP_129S1SvImJ_P0059422 Rnf114 protein_coding protein_coding MGP_129S1SvImJ_T0059423.1 MGP_129S1SvImJ_G0026914.1 mouse_genomes_project 2 173244128 173260451 + MGP_129S1SvImJ_P0059423 Rnf114 protein_coding protein_coding MGP_129S1SvImJ_T0059424.1 MGP_129S1SvImJ_G0026914.1 mouse_genomes_project 2 173244485 173260442 + MGP_129S1SvImJ_P0059424 Rnf114 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053559.1 MGP_129S1SvImJ_G0025526.1 mouse_genomes_project 2 26617532 26625097 - MGP_129S1SvImJ_P0053559 Cel protein_coding protein_coding MGP_129S1SvImJ_T0053560.1 MGP_129S1SvImJ_G0025526.1 mouse_genomes_project 2 26622254 26625138 - Cel protein_coding processed_transcript MGP_129S1SvImJ_T0010395.1 MGP_129S1SvImJ_G0008511.1 mouse_genomes_project 2 20380782 20380877 + Gm23636 miRNA miRNA MGP_129S1SvImJ_T0056433.1 MGP_129S1SvImJ_G0026206.1 mouse_genomes_project 2 105710359 105750457 - MGP_129S1SvImJ_P0056433 Nat10 protein_coding protein_coding MGP_129S1SvImJ_T0056434.1 MGP_129S1SvImJ_G0026206.1 mouse_genomes_project 2 105710363 105750428 - Nat10 protein_coding retained_intron MGP_129S1SvImJ_T0056435.1 MGP_129S1SvImJ_G0026206.1 mouse_genomes_project 2 105710363 105750428 - Nat10 protein_coding retained_intron MGP_129S1SvImJ_T0056436.1 MGP_129S1SvImJ_G0026206.1 mouse_genomes_project 2 105710363 105750384 - Nat10 protein_coding retained_intron MGP_129S1SvImJ_T0056437.1 MGP_129S1SvImJ_G0026206.1 mouse_genomes_project 2 105710764 105713533 - Nat10 protein_coding retained_intron MGP_129S1SvImJ_T0056438.1 MGP_129S1SvImJ_G0026206.1 mouse_genomes_project 2 105711030 105750391 - Nat10 protein_coding retained_intron MGP_129S1SvImJ_T0056439.1 MGP_129S1SvImJ_G0026206.1 mouse_genomes_project 2 105720925 105723597 - Nat10 protein_coding retained_intron MGP_129S1SvImJ_T0056440.1 MGP_129S1SvImJ_G0026206.1 mouse_genomes_project 2 105721120 105722363 - Nat10 protein_coding retained_intron MGP_129S1SvImJ_T0056441.1 MGP_129S1SvImJ_G0026206.1 mouse_genomes_project 2 105723442 105733014 - Nat10 protein_coding retained_intron MGP_129S1SvImJ_T0056442.1 MGP_129S1SvImJ_G0026206.1 mouse_genomes_project 2 105729216 105750457 - Nat10 protein_coding retained_intron MGP_129S1SvImJ_T0056443.1 MGP_129S1SvImJ_G0026206.1 mouse_genomes_project 2 105739662 105750113 - MGP_129S1SvImJ_P0056443 Nat10 protein_coding protein_coding MGP_129S1SvImJ_T0056444.1 MGP_129S1SvImJ_G0026206.1 mouse_genomes_project 2 105742449 105750448 - Nat10 protein_coding retained_intron MGP_129S1SvImJ_T0056445.1 MGP_129S1SvImJ_G0026206.1 mouse_genomes_project 2 105746531 105750382 - Nat10 protein_coding retained_intron MGP_129S1SvImJ_T0056446.1 MGP_129S1SvImJ_G0026206.1 mouse_genomes_project 2 105746668 105747849 - MGP_129S1SvImJ_P0056446 Nat10 protein_coding protein_coding MGP_129S1SvImJ_T0004164.1 MGP_129S1SvImJ_G0003684.1 mouse_genomes_project 2 166040868 166088754 - Gm16751 antisense antisense MGP_129S1SvImJ_T0054208.1 MGP_129S1SvImJ_G0025621.1 mouse_genomes_project 2 31248954 31268872 - MGP_129S1SvImJ_P0054208 Ttc16 protein_coding protein_coding MGP_129S1SvImJ_T0054217.1 MGP_129S1SvImJ_G0025621.1 mouse_genomes_project 2 31255632 31269073 - MGP_129S1SvImJ_P0054217 Ttc16 protein_coding protein_coding MGP_129S1SvImJ_T0054218.1 MGP_129S1SvImJ_G0025621.1 mouse_genomes_project 2 31255795 31268926 - MGP_129S1SvImJ_P0054218 Ttc16 protein_coding protein_coding MGP_129S1SvImJ_T0054219.1 MGP_129S1SvImJ_G0025621.1 mouse_genomes_project 2 31257583 31269122 - MGP_129S1SvImJ_P0054219 Ttc16 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054220.1 MGP_129S1SvImJ_G0025621.1 mouse_genomes_project 2 31266248 31269076 - Ttc16 protein_coding retained_intron MGP_129S1SvImJ_T0054221.1 MGP_129S1SvImJ_G0025621.1 mouse_genomes_project 2 31267995 31269120 - MGP_129S1SvImJ_P0054221 Ttc16 protein_coding protein_coding MGP_129S1SvImJ_T0013905.1 MGP_129S1SvImJ_G0011994.1 mouse_genomes_project 2 188350127 188351028 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013826.1 MGP_129S1SvImJ_G0011915.1 mouse_genomes_project 2 153693808 153695527 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058961.1 MGP_129S1SvImJ_G0026802.1 mouse_genomes_project 2 165482891 165485130 - MGP_129S1SvImJ_P0058961 Gm826 protein_coding protein_coding MGP_129S1SvImJ_T0058962.1 MGP_129S1SvImJ_G0026802.1 mouse_genomes_project 2 165483242 165507757 - Gm826 protein_coding processed_transcript MGP_129S1SvImJ_T0058963.1 MGP_129S1SvImJ_G0026802.1 mouse_genomes_project 2 165483359 165501092 - MGP_129S1SvImJ_P0058963 Gm826 protein_coding protein_coding MGP_129S1SvImJ_T0053078.1 MGP_129S1SvImJ_G0025435.1 mouse_genomes_project 2 23140363 23153786 + MGP_129S1SvImJ_P0053078 Anapc2 protein_coding protein_coding MGP_129S1SvImJ_T0053079.1 MGP_129S1SvImJ_G0025435.1 mouse_genomes_project 2 23140480 23144257 + Anapc2 protein_coding processed_transcript MGP_129S1SvImJ_T0053080.1 MGP_129S1SvImJ_G0025435.1 mouse_genomes_project 2 23141363 23146291 + MGP_129S1SvImJ_P0053080 Anapc2 protein_coding protein_coding MGP_129S1SvImJ_T0053081.1 MGP_129S1SvImJ_G0025435.1 mouse_genomes_project 2 23146878 23148341 + Anapc2 protein_coding processed_transcript MGP_129S1SvImJ_T0099716.1 MGP_129S1SvImJ_G0037783.1 mouse_genomes_project 2 188017729 188017832 - Gm22708 snRNA snRNA MGP_129S1SvImJ_T0056831.1 MGP_129S1SvImJ_G0026325.1 mouse_genomes_project 2 121571297 121590443 + MGP_129S1SvImJ_P0056831 Ivd protein_coding protein_coding MGP_129S1SvImJ_T0056832.1 MGP_129S1SvImJ_G0026325.1 mouse_genomes_project 2 121571371 121577962 + Ivd protein_coding retained_intron MGP_129S1SvImJ_T0056833.1 MGP_129S1SvImJ_G0026325.1 mouse_genomes_project 2 121578942 121579812 + Ivd protein_coding processed_transcript MGP_129S1SvImJ_T0056834.1 MGP_129S1SvImJ_G0026325.1 mouse_genomes_project 2 121579837 121584491 + Ivd protein_coding processed_transcript MGP_129S1SvImJ_T0056835.1 MGP_129S1SvImJ_G0026325.1 mouse_genomes_project 2 121580303 121582303 + Ivd protein_coding retained_intron MGP_129S1SvImJ_T0056836.1 MGP_129S1SvImJ_G0026325.1 mouse_genomes_project 2 121581846 121588065 + Ivd protein_coding processed_transcript MGP_129S1SvImJ_T0056837.1 MGP_129S1SvImJ_G0026325.1 mouse_genomes_project 2 121583240 121588500 + Ivd protein_coding processed_transcript MGP_129S1SvImJ_T0056838.1 MGP_129S1SvImJ_G0026325.1 mouse_genomes_project 2 121583964 121585423 + Ivd protein_coding processed_transcript MGP_129S1SvImJ_T0055255.1 MGP_129S1SvImJ_G0025823.1 mouse_genomes_project 2 71564558 71643489 + MGP_129S1SvImJ_P0055255 Metap1d protein_coding protein_coding MGP_129S1SvImJ_T0055256.1 MGP_129S1SvImJ_G0025823.1 mouse_genomes_project 2 71564615 71634256 + Metap1d protein_coding processed_transcript MGP_129S1SvImJ_T0055257.1 MGP_129S1SvImJ_G0025823.1 mouse_genomes_project 2 71564633 71643492 + Metap1d protein_coding processed_transcript MGP_129S1SvImJ_T0055258.1 MGP_129S1SvImJ_G0025823.1 mouse_genomes_project 2 71564645 71643079 + Metap1d protein_coding processed_transcript MGP_129S1SvImJ_T0055259.1 MGP_129S1SvImJ_G0025823.1 mouse_genomes_project 2 71628570 71635453 + Metap1d protein_coding processed_transcript MGP_129S1SvImJ_T0055260.1 MGP_129S1SvImJ_G0025823.1 mouse_genomes_project 2 71633712 71634585 + Metap1d protein_coding processed_transcript MGP_129S1SvImJ_T0054481.1 MGP_129S1SvImJ_G0025666.1 mouse_genomes_project 2 35144608 35145547 + MGP_129S1SvImJ_P0054481 Olfr340 protein_coding protein_coding MGP_129S1SvImJ_T0013847.1 MGP_129S1SvImJ_G0011936.1 mouse_genomes_project 2 160374974 160375265 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013714.1 MGP_129S1SvImJ_G0011803.1 mouse_genomes_project 2 106947759 106948942 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055985.1 MGP_129S1SvImJ_G0026133.1 mouse_genomes_project 2 92133090 92152975 + MGP_129S1SvImJ_P0055985 Mtch2 protein_coding protein_coding MGP_129S1SvImJ_T0055986.1 MGP_129S1SvImJ_G0026133.1 mouse_genomes_project 2 92133113 92151553 + MGP_129S1SvImJ_P0055986 Mtch2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055987.1 MGP_129S1SvImJ_G0026133.1 mouse_genomes_project 2 92133125 92134250 + Mtch2 protein_coding processed_transcript MGP_129S1SvImJ_T0055988.1 MGP_129S1SvImJ_G0026133.1 mouse_genomes_project 2 92133166 92152805 + MGP_129S1SvImJ_P0055988 Mtch2 protein_coding protein_coding MGP_129S1SvImJ_T0055989.1 MGP_129S1SvImJ_G0026133.1 mouse_genomes_project 2 92133188 92137556 + Mtch2 protein_coding retained_intron MGP_129S1SvImJ_T0055990.1 MGP_129S1SvImJ_G0026133.1 mouse_genomes_project 2 92133208 92152805 + MGP_129S1SvImJ_P0055990 Mtch2 protein_coding protein_coding MGP_129S1SvImJ_T0055991.1 MGP_129S1SvImJ_G0026133.1 mouse_genomes_project 2 92133222 92151556 + Mtch2 protein_coding processed_transcript MGP_129S1SvImJ_T0055992.1 MGP_129S1SvImJ_G0026133.1 mouse_genomes_project 2 92138126 92141683 + Mtch2 protein_coding retained_intron MGP_129S1SvImJ_T0055993.1 MGP_129S1SvImJ_G0026133.1 mouse_genomes_project 2 92138761 92142800 + Mtch2 protein_coding retained_intron MGP_129S1SvImJ_T0055994.1 MGP_129S1SvImJ_G0026133.1 mouse_genomes_project 2 92147180 92151636 + Mtch2 protein_coding retained_intron MGP_129S1SvImJ_T0055995.1 MGP_129S1SvImJ_G0026133.1 mouse_genomes_project 2 92149623 92151553 + Mtch2 protein_coding retained_intron MGP_129S1SvImJ_T0010399.1 MGP_129S1SvImJ_G0008515.1 mouse_genomes_project 2 23331279 23331335 + Mir3087 miRNA miRNA MGP_129S1SvImJ_T0052493.1 MGP_129S1SvImJ_G0025335.1 mouse_genomes_project 2 7219846 7226346 - 9230102O04Rik protein_coding processed_transcript MGP_129S1SvImJ_T0052494.1 MGP_129S1SvImJ_G0025335.1 mouse_genomes_project 2 7219847 7220799 - MGP_129S1SvImJ_P0052494 9230102O04Rik protein_coding protein_coding MGP_129S1SvImJ_T0013608.1 MGP_129S1SvImJ_G0011697.1 mouse_genomes_project 2 73376849 73377371 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058431.1 MGP_129S1SvImJ_G0026700.1 mouse_genomes_project 2 158580742 158604436 + MGP_129S1SvImJ_P0058431 Bpifb2 protein_coding protein_coding MGP_129S1SvImJ_T0058432.1 MGP_129S1SvImJ_G0026700.1 mouse_genomes_project 2 158580772 158582083 + Bpifb2 protein_coding retained_intron MGP_129S1SvImJ_T0054536.1 MGP_129S1SvImJ_G0025698.1 mouse_genomes_project 2 36216590 36217430 + Gpr21 protein_coding processed_transcript MGP_129S1SvImJ_T0054538.1 MGP_129S1SvImJ_G0025698.1 mouse_genomes_project 2 36216884 36220862 + MGP_129S1SvImJ_P0054538 Gpr21 protein_coding protein_coding MGP_129S1SvImJ_T0099697.1 MGP_129S1SvImJ_G0037764.1 mouse_genomes_project 2 131403967 131404104 + Gm23101 snRNA snRNA MGP_129S1SvImJ_T0058830.1 MGP_129S1SvImJ_G0026775.1 mouse_genomes_project 2 162063107 162072691 + MGP_129S1SvImJ_P0058830 Tldc2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0058831.1 MGP_129S1SvImJ_G0026775.1 mouse_genomes_project 2 162064668 162072692 + MGP_129S1SvImJ_P0058831 Tldc2 protein_coding protein_coding MGP_129S1SvImJ_T0052427.1 MGP_129S1SvImJ_G0025325.1 mouse_genomes_project 2 2994727 2995582 - Gm13199 protein_coding processed_transcript MGP_129S1SvImJ_T0052428.1 MGP_129S1SvImJ_G0025325.1 mouse_genomes_project 2 2994728 2995571 - MGP_129S1SvImJ_P0052428 Gm13199 protein_coding protein_coding MGP_129S1SvImJ_T0007132.1 MGP_129S1SvImJ_G0005855.1 mouse_genomes_project 2 2241229 2344766 - Gm26776 lincRNA lincRNA MGP_129S1SvImJ_T0056907.1 MGP_129S1SvImJ_G0026346.1 mouse_genomes_project 2 122407885 122432961 - Oip5 protein_coding retained_intron MGP_129S1SvImJ_T0056908.1 MGP_129S1SvImJ_G0026346.1 mouse_genomes_project 2 122408326 122432961 - MGP_129S1SvImJ_P0056908 Oip5 protein_coding protein_coding MGP_129S1SvImJ_T0007344.1 MGP_129S1SvImJ_G0006023.1 mouse_genomes_project 2 139422433 139429364 - Gm14211 lincRNA lincRNA MGP_129S1SvImJ_T0053628.1 MGP_129S1SvImJ_G0025539.1 mouse_genomes_project 2 27476171 27664168 + MGP_129S1SvImJ_P0053628 Med27 protein_coding protein_coding MGP_129S1SvImJ_T0053629.1 MGP_129S1SvImJ_G0025539.1 mouse_genomes_project 2 27476185 27615166 + MGP_129S1SvImJ_P0053629 Med27 protein_coding protein_coding MGP_129S1SvImJ_T0053630.1 MGP_129S1SvImJ_G0025539.1 mouse_genomes_project 2 27509322 27648838 + MGP_129S1SvImJ_P0053630 Med27 protein_coding protein_coding MGP_129S1SvImJ_T0053631.1 MGP_129S1SvImJ_G0025539.1 mouse_genomes_project 2 27509322 27637057 + MGP_129S1SvImJ_P0053631 Med27 protein_coding protein_coding MGP_129S1SvImJ_T0053632.1 MGP_129S1SvImJ_G0025539.1 mouse_genomes_project 2 27509996 27636954 + MGP_129S1SvImJ_P0053632 Med27 protein_coding protein_coding MGP_129S1SvImJ_T0053633.1 MGP_129S1SvImJ_G0025539.1 mouse_genomes_project 2 27510015 27663930 + MGP_129S1SvImJ_P0053633 Med27 protein_coding protein_coding MGP_129S1SvImJ_T0053634.1 MGP_129S1SvImJ_G0025539.1 mouse_genomes_project 2 27510087 27614358 + MGP_129S1SvImJ_P0053634 Med27 protein_coding protein_coding MGP_129S1SvImJ_T0053635.1 MGP_129S1SvImJ_G0025539.1 mouse_genomes_project 2 27522821 27662226 + Med27 protein_coding processed_transcript MGP_129S1SvImJ_T0053636.1 MGP_129S1SvImJ_G0025539.1 mouse_genomes_project 2 27633237 27637279 + Med27 protein_coding retained_intron MGP_129S1SvImJ_T0053637.1 MGP_129S1SvImJ_G0025539.1 mouse_genomes_project 2 27641600 27664056 + Med27 protein_coding processed_transcript MGP_129S1SvImJ_T0007437.1 MGP_129S1SvImJ_G0006103.1 mouse_genomes_project 2 181229011 181240082 - Gm14618 lincRNA lincRNA MGP_129S1SvImJ_T0007228.1 MGP_129S1SvImJ_G0005931.1 mouse_genomes_project 2 71905992 71908079 - Gm17250 lincRNA lincRNA MGP_129S1SvImJ_T0013704.1 MGP_129S1SvImJ_G0011793.1 mouse_genomes_project 2 105531408 105531838 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0052922.1 MGP_129S1SvImJ_G0025410.1 mouse_genomes_project 2 22228351 22285621 - MGP_129S1SvImJ_P0052922 Pax8 protein_coding protein_coding MGP_129S1SvImJ_T0052923.1 MGP_129S1SvImJ_G0025410.1 mouse_genomes_project 2 22229185 22230874 - Pax8 protein_coding retained_intron MGP_129S1SvImJ_T0052924.1 MGP_129S1SvImJ_G0025410.1 mouse_genomes_project 2 22229311 22285119 - MGP_129S1SvImJ_P0052924 Pax8 protein_coding protein_coding MGP_129S1SvImJ_T0052925.1 MGP_129S1SvImJ_G0025410.1 mouse_genomes_project 2 22229322 22285586 - MGP_129S1SvImJ_P0052925 Pax8 protein_coding protein_coding MGP_129S1SvImJ_T0052926.1 MGP_129S1SvImJ_G0025410.1 mouse_genomes_project 2 22237308 22285596 - MGP_129S1SvImJ_P0052926 Pax8 protein_coding protein_coding MGP_129S1SvImJ_T0052927.1 MGP_129S1SvImJ_G0025410.1 mouse_genomes_project 2 22250316 22285237 - MGP_129S1SvImJ_P0052927 Pax8 protein_coding protein_coding MGP_129S1SvImJ_T0052928.1 MGP_129S1SvImJ_G0025410.1 mouse_genomes_project 2 22252137 22255040 - Pax8 protein_coding processed_transcript MGP_129S1SvImJ_T0052929.1 MGP_129S1SvImJ_G0025410.1 mouse_genomes_project 2 22281907 22285596 - Pax8 protein_coding retained_intron MGP_129S1SvImJ_T0013785.1 MGP_129S1SvImJ_G0011874.1 mouse_genomes_project 2 136621570 136622570 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057315.1 MGP_129S1SvImJ_G0026419.1 mouse_genomes_project 2 125718588 125745006 - MGP_129S1SvImJ_P0057315 Slc30a4 protein_coding protein_coding MGP_129S1SvImJ_T0057316.1 MGP_129S1SvImJ_G0026419.1 mouse_genomes_project 2 125719736 125745030 - MGP_129S1SvImJ_P0057316 Slc30a4 protein_coding protein_coding MGP_129S1SvImJ_T0017925.1 MGP_129S1SvImJ_G0015482.1 mouse_genomes_project 2 161782195 161808603 - 5430405H02Rik processed_transcript antisense MGP_129S1SvImJ_T0017926.1 MGP_129S1SvImJ_G0015482.1 mouse_genomes_project 2 161790264 161808585 - 5430405H02Rik processed_transcript antisense MGP_129S1SvImJ_T0017927.1 MGP_129S1SvImJ_G0015482.1 mouse_genomes_project 2 161790264 161808534 - 5430405H02Rik processed_transcript antisense MGP_129S1SvImJ_T0017928.1 MGP_129S1SvImJ_G0015482.1 mouse_genomes_project 2 161791947 161801931 - 5430405H02Rik processed_transcript retained_intron MGP_129S1SvImJ_T0058301.1 MGP_129S1SvImJ_G0026657.1 mouse_genomes_project 2 156902911 156910809 - MGP_129S1SvImJ_P0058301 Nrsn2 protein_coding protein_coding MGP_129S1SvImJ_T0057054.1 MGP_129S1SvImJ_G0026369.1 mouse_genomes_project 2 123434415 123468817 + MGP_129S1SvImJ_P0057054 Snap23 protein_coding protein_coding MGP_129S1SvImJ_T0057055.1 MGP_129S1SvImJ_G0026369.1 mouse_genomes_project 2 123434435 123468817 + MGP_129S1SvImJ_P0057055 Snap23 protein_coding protein_coding MGP_129S1SvImJ_T0057056.1 MGP_129S1SvImJ_G0026369.1 mouse_genomes_project 2 123434441 123468817 + MGP_129S1SvImJ_P0057056 Snap23 protein_coding protein_coding MGP_129S1SvImJ_T0057057.1 MGP_129S1SvImJ_G0026369.1 mouse_genomes_project 2 123434465 123464328 + MGP_129S1SvImJ_P0057057 Snap23 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057058.1 MGP_129S1SvImJ_G0026369.1 mouse_genomes_project 2 123434467 123451631 + Snap23 protein_coding retained_intron MGP_129S1SvImJ_T0057059.1 MGP_129S1SvImJ_G0026369.1 mouse_genomes_project 2 123434467 123452953 + MGP_129S1SvImJ_P0057059 Snap23 protein_coding protein_coding MGP_129S1SvImJ_T0057060.1 MGP_129S1SvImJ_G0026369.1 mouse_genomes_project 2 123434482 123464241 + MGP_129S1SvImJ_P0057060 Snap23 protein_coding protein_coding MGP_129S1SvImJ_T0057061.1 MGP_129S1SvImJ_G0026369.1 mouse_genomes_project 2 123452926 123462960 + Snap23 protein_coding retained_intron MGP_129S1SvImJ_T0057062.1 MGP_129S1SvImJ_G0026369.1 mouse_genomes_project 2 123458074 123464323 + Snap23 protein_coding processed_transcript MGP_129S1SvImJ_T0057571.1 MGP_129S1SvImJ_G0026478.1 mouse_genomes_project 2 132294020 132318018 - MGP_129S1SvImJ_P0057571 Zc3h8 protein_coding protein_coding MGP_129S1SvImJ_T0013464.1 MGP_129S1SvImJ_G0011553.1 mouse_genomes_project 2 17798236 17799035 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017850.1 MGP_129S1SvImJ_G0015448.1 mouse_genomes_project 2 95956015 95961545 + 2810002D19Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0004192.1 MGP_129S1SvImJ_G0003704.1 mouse_genomes_project 2 176452708 176454715 + Bcas1os1 antisense antisense MGP_129S1SvImJ_T0001062.1 MGP_129S1SvImJ_G0000991.1 mouse_genomes_project 2 10485441 10487054 + TEC TEC MGP_129S1SvImJ_T0102442.1 MGP_129S1SvImJ_G0040276.1 mouse_genomes_project 2 132770038 132771164 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0004186.1 MGP_129S1SvImJ_G0003698.1 mouse_genomes_project 2 171473700 171477474 + antisense antisense MGP_129S1SvImJ_T0058372.1 MGP_129S1SvImJ_G0026686.1 mouse_genomes_project 2 157674609 157692945 + Ccm2l protein_coding processed_transcript MGP_129S1SvImJ_T0058373.1 MGP_129S1SvImJ_G0026686.1 mouse_genomes_project 2 157674638 157679796 + Ccm2l protein_coding processed_transcript MGP_129S1SvImJ_T0058374.1 MGP_129S1SvImJ_G0026686.1 mouse_genomes_project 2 157674652 157679603 + MGP_129S1SvImJ_P0058374 Ccm2l protein_coding protein_coding MGP_129S1SvImJ_T0058375.1 MGP_129S1SvImJ_G0026686.1 mouse_genomes_project 2 157674661 157692945 + MGP_129S1SvImJ_P0058375 Ccm2l protein_coding protein_coding MGP_129S1SvImJ_T0054619.1 MGP_129S1SvImJ_G0025712.1 mouse_genomes_project 2 38009075 38043370 - MGP_129S1SvImJ_P0054619 Ppp6c protein_coding protein_coding MGP_129S1SvImJ_T0054620.1 MGP_129S1SvImJ_G0025712.1 mouse_genomes_project 2 38009081 38043160 - MGP_129S1SvImJ_P0054620 Ppp6c protein_coding protein_coding MGP_129S1SvImJ_T0054621.1 MGP_129S1SvImJ_G0025712.1 mouse_genomes_project 2 38012670 38043201 - MGP_129S1SvImJ_P0054621 Ppp6c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054622.1 MGP_129S1SvImJ_G0025712.1 mouse_genomes_project 2 38012713 38043239 - MGP_129S1SvImJ_P0054622 Ppp6c protein_coding protein_coding MGP_129S1SvImJ_T0054623.1 MGP_129S1SvImJ_G0025712.1 mouse_genomes_project 2 38013433 38016927 - Ppp6c protein_coding processed_transcript MGP_129S1SvImJ_T0010365.1 MGP_129S1SvImJ_G0008481.1 mouse_genomes_project 2 7834137 7834234 + Mir467c miRNA miRNA MGP_129S1SvImJ_T0013679.1 MGP_129S1SvImJ_G0011768.1 mouse_genomes_project 2 94000725 94001137 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003908.1 MGP_129S1SvImJ_G0003496.1 mouse_genomes_project 2 1637805 1639072 - Gm13179 antisense antisense MGP_129S1SvImJ_T0003909.1 MGP_129S1SvImJ_G0003496.1 mouse_genomes_project 2 1638109 1639072 - Gm13179 antisense antisense MGP_129S1SvImJ_T0056266.1 MGP_129S1SvImJ_G0026174.1 mouse_genomes_project 2 94693367 94825427 - MGP_129S1SvImJ_P0056266 Tspan18 protein_coding protein_coding MGP_129S1SvImJ_T0056267.1 MGP_129S1SvImJ_G0026174.1 mouse_genomes_project 2 94695854 94719460 - MGP_129S1SvImJ_P0056267 Tspan18 protein_coding protein_coding MGP_129S1SvImJ_T0056268.1 MGP_129S1SvImJ_G0026174.1 mouse_genomes_project 2 94802155 94825445 - Tspan18 protein_coding processed_transcript MGP_129S1SvImJ_T0056269.1 MGP_129S1SvImJ_G0026174.1 mouse_genomes_project 2 94802155 94803408 - Tspan18 protein_coding processed_transcript MGP_129S1SvImJ_T0059495.1 MGP_129S1SvImJ_G0026931.1 mouse_genomes_project 2 175568476 175573058 - MGP_129S1SvImJ_P0059495 Gm11011 protein_coding protein_coding MGP_129S1SvImJ_T0001089.1 MGP_129S1SvImJ_G0001018.1 mouse_genomes_project 2 34515568 34518556 + TEC TEC MGP_129S1SvImJ_T0013454.1 MGP_129S1SvImJ_G0011543.1 mouse_genomes_project 2 15863174 15863588 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007225.1 MGP_129S1SvImJ_G0005928.1 mouse_genomes_project 2 67552883 67563156 - Gm26743 lincRNA lincRNA MGP_129S1SvImJ_T0013587.1 MGP_129S1SvImJ_G0011676.1 mouse_genomes_project 2 65091225 65092417 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013613.1 MGP_129S1SvImJ_G0011702.1 mouse_genomes_project 2 74945639 74946098 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007236.1 MGP_129S1SvImJ_G0005936.1 mouse_genomes_project 2 74194665 74205117 + Gm10822 lincRNA lincRNA MGP_129S1SvImJ_T0058804.1 MGP_129S1SvImJ_G0026769.1 mouse_genomes_project 2 161802431 161803767 - MGP_129S1SvImJ_P0058804 4930518I15Rik protein_coding protein_coding MGP_129S1SvImJ_T0100928.1 MGP_129S1SvImJ_G0038995.1 mouse_genomes_project 2 31153923 31154060 + Gm26236 snoRNA snoRNA MGP_129S1SvImJ_T0001122.1 MGP_129S1SvImJ_G0001050.1 mouse_genomes_project 2 160942335 160944011 - TEC TEC MGP_129S1SvImJ_T0099689.1 MGP_129S1SvImJ_G0037756.1 mouse_genomes_project 2 119572792 119572927 - Gm25514 snRNA snRNA MGP_129S1SvImJ_T0017791.1 MGP_129S1SvImJ_G0015410.1 mouse_genomes_project 2 28981618 28989087 - Gm14488 processed_transcript processed_transcript MGP_129S1SvImJ_T0017792.1 MGP_129S1SvImJ_G0015410.1 mouse_genomes_project 2 28981621 28986153 - Gm14488 processed_transcript retained_intron MGP_129S1SvImJ_T0013584.1 MGP_129S1SvImJ_G0011673.1 mouse_genomes_project 2 64628666 64629252 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098353.1 MGP_129S1SvImJ_G0036438.1 mouse_genomes_project 2 93304369 93304770 - pseudogene pseudogene MGP_129S1SvImJ_T0010422.1 MGP_129S1SvImJ_G0008538.1 mouse_genomes_project 2 31880554 31880607 - Gm25998 miRNA miRNA MGP_129S1SvImJ_T0007336.1 MGP_129S1SvImJ_G0006016.1 mouse_genomes_project 2 136009561 136040900 + 4921508D12Rik lincRNA lincRNA MGP_129S1SvImJ_T0001118.1 MGP_129S1SvImJ_G0001046.1 mouse_genomes_project 2 132575350 132576391 - TEC TEC MGP_129S1SvImJ_T0053304.1 MGP_129S1SvImJ_G0025481.1 mouse_genomes_project 2 24204429 24210224 - MGP_129S1SvImJ_P0053304 C030048H21Rik protein_coding protein_coding MGP_129S1SvImJ_T0013583.1 MGP_129S1SvImJ_G0011672.1 mouse_genomes_project 2 64628666 64629256 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102416.1 MGP_129S1SvImJ_G0040250.1 mouse_genomes_project 2 88305299 88306220 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0017803.1 MGP_129S1SvImJ_G0015416.1 mouse_genomes_project 2 37437190 37441200 + Gm13587 processed_transcript processed_transcript MGP_129S1SvImJ_T0059098.1 MGP_129S1SvImJ_G0026836.1 mouse_genomes_project 2 169449280 169470019 + MGP_129S1SvImJ_P0059098 Stk4 protein_coding protein_coding MGP_129S1SvImJ_T0059099.1 MGP_129S1SvImJ_G0026836.1 mouse_genomes_project 2 169456027 169547130 + MGP_129S1SvImJ_P0059099 Stk4 protein_coding protein_coding MGP_129S1SvImJ_T0059100.1 MGP_129S1SvImJ_G0026836.1 mouse_genomes_project 2 169465204 169481955 + Stk4 protein_coding processed_transcript MGP_129S1SvImJ_T0059101.1 MGP_129S1SvImJ_G0026836.1 mouse_genomes_project 2 169484634 169510064 + MGP_129S1SvImJ_P0059101 Stk4 protein_coding protein_coding MGP_129S1SvImJ_T0059102.1 MGP_129S1SvImJ_G0026836.1 mouse_genomes_project 2 169496617 169547130 + MGP_129S1SvImJ_P0059102 Stk4 protein_coding protein_coding MGP_129S1SvImJ_T0056481.1 MGP_129S1SvImJ_G0026213.1 mouse_genomes_project 2 106110969 106174783 + MGP_129S1SvImJ_P0056481 Cd59a protein_coding protein_coding MGP_129S1SvImJ_T0058378.1 MGP_129S1SvImJ_G0026688.1 mouse_genomes_project 2 157774125 157820198 + Tm9sf4 protein_coding processed_transcript MGP_129S1SvImJ_T0058379.1 MGP_129S1SvImJ_G0026688.1 mouse_genomes_project 2 157774125 157825801 + MGP_129S1SvImJ_P0058379 Tm9sf4 protein_coding protein_coding MGP_129S1SvImJ_T0058380.1 MGP_129S1SvImJ_G0026688.1 mouse_genomes_project 2 157774363 157803934 + Tm9sf4 protein_coding processed_transcript MGP_129S1SvImJ_T0058381.1 MGP_129S1SvImJ_G0026688.1 mouse_genomes_project 2 157774370 157808409 + Tm9sf4 protein_coding retained_intron MGP_129S1SvImJ_T0058382.1 MGP_129S1SvImJ_G0026688.1 mouse_genomes_project 2 157805272 157807061 + Tm9sf4 protein_coding retained_intron MGP_129S1SvImJ_T0058383.1 MGP_129S1SvImJ_G0026688.1 mouse_genomes_project 2 157805799 157816419 + Tm9sf4 protein_coding processed_transcript MGP_129S1SvImJ_T0058384.1 MGP_129S1SvImJ_G0026688.1 mouse_genomes_project 2 157809214 157819238 + Tm9sf4 protein_coding processed_transcript MGP_129S1SvImJ_T0058385.1 MGP_129S1SvImJ_G0026688.1 mouse_genomes_project 2 157810403 157814573 + Tm9sf4 protein_coding processed_transcript MGP_129S1SvImJ_T0058386.1 MGP_129S1SvImJ_G0026688.1 mouse_genomes_project 2 157815905 157825801 + Tm9sf4 protein_coding retained_intron MGP_129S1SvImJ_T0058387.1 MGP_129S1SvImJ_G0026688.1 mouse_genomes_project 2 157817479 157825801 + Tm9sf4 protein_coding retained_intron MGP_129S1SvImJ_T0017815.1 MGP_129S1SvImJ_G0015424.1 mouse_genomes_project 2 69868115 69868881 - Gm13625 processed_transcript processed_transcript MGP_129S1SvImJ_T0053115.1 MGP_129S1SvImJ_G0025441.1 mouse_genomes_project 2 23237470 23243264 - MGP_129S1SvImJ_P0053115 Uap1l1 protein_coding protein_coding MGP_129S1SvImJ_T0053116.1 MGP_129S1SvImJ_G0025441.1 mouse_genomes_project 2 23239070 23240312 - Uap1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0053117.1 MGP_129S1SvImJ_G0025441.1 mouse_genomes_project 2 23239071 23241280 - Uap1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0053118.1 MGP_129S1SvImJ_G0025441.1 mouse_genomes_project 2 23239075 23241710 - Uap1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0053119.1 MGP_129S1SvImJ_G0025441.1 mouse_genomes_project 2 23240924 23242239 - Uap1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0053120.1 MGP_129S1SvImJ_G0025441.1 mouse_genomes_project 2 23241699 23243197 - Uap1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0054297.1 MGP_129S1SvImJ_G0025636.1 mouse_genomes_project 2 32271757 32437121 - MGP_129S1SvImJ_P0054297 Mvb12b protein_coding protein_coding MGP_129S1SvImJ_T0054298.1 MGP_129S1SvImJ_G0025636.1 mouse_genomes_project 2 32329004 32332453 - Mvb12b protein_coding retained_intron MGP_129S1SvImJ_T0054299.1 MGP_129S1SvImJ_G0025636.1 mouse_genomes_project 2 32330861 32434312 - Mvb12b protein_coding processed_transcript MGP_129S1SvImJ_T0054300.1 MGP_129S1SvImJ_G0025636.1 mouse_genomes_project 2 32369410 32434312 - MGP_129S1SvImJ_P0054300 Mvb12b protein_coding protein_coding MGP_129S1SvImJ_T0058163.1 MGP_129S1SvImJ_G0026622.1 mouse_genomes_project 2 153779536 153784638 + MGP_129S1SvImJ_P0058163 Cst10 protein_coding protein_coding MGP_129S1SvImJ_T0058164.1 MGP_129S1SvImJ_G0026622.1 mouse_genomes_project 2 153779728 153784638 + MGP_129S1SvImJ_P0058164 Cst10 protein_coding protein_coding MGP_129S1SvImJ_T0058165.1 MGP_129S1SvImJ_G0026622.1 mouse_genomes_project 2 153779812 153784638 + MGP_129S1SvImJ_P0058165 Cst10 protein_coding protein_coding MGP_129S1SvImJ_T0010493.1 MGP_129S1SvImJ_G0008609.1 mouse_genomes_project 2 169783569 169783640 - Mir7678 miRNA miRNA MGP_129S1SvImJ_T0057135.1 MGP_129S1SvImJ_G0026383.1 mouse_genomes_project 2 124045283 124055619 - MGP_129S1SvImJ_P0057135 Zscan29 protein_coding protein_coding MGP_129S1SvImJ_T0057136.1 MGP_129S1SvImJ_G0026383.1 mouse_genomes_project 2 124045283 124055592 - MGP_129S1SvImJ_P0057136 Zscan29 protein_coding protein_coding MGP_129S1SvImJ_T0057137.1 MGP_129S1SvImJ_G0026383.1 mouse_genomes_project 2 124046069 124049008 - Zscan29 protein_coding retained_intron MGP_129S1SvImJ_T0057587.1 MGP_129S1SvImJ_G0026485.1 mouse_genomes_project 2 132578004 132583506 + MGP_129S1SvImJ_P0057587 Slc20a1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0057588.1 MGP_129S1SvImJ_G0026485.1 mouse_genomes_project 2 132578028 132590810 + MGP_129S1SvImJ_P0057588 Slc20a1 protein_coding protein_coding MGP_129S1SvImJ_T0057589.1 MGP_129S1SvImJ_G0026485.1 mouse_genomes_project 2 132578065 132580373 + Slc20a1 protein_coding retained_intron MGP_129S1SvImJ_T0057590.1 MGP_129S1SvImJ_G0026485.1 mouse_genomes_project 2 132578067 132584297 + Slc20a1 protein_coding processed_transcript MGP_129S1SvImJ_T0057591.1 MGP_129S1SvImJ_G0026485.1 mouse_genomes_project 2 132578067 132580371 + Slc20a1 protein_coding retained_intron MGP_129S1SvImJ_T0057592.1 MGP_129S1SvImJ_G0026485.1 mouse_genomes_project 2 132578408 132579011 + MGP_129S1SvImJ_P0057592 Slc20a1 protein_coding protein_coding MGP_129S1SvImJ_T0057593.1 MGP_129S1SvImJ_G0026485.1 mouse_genomes_project 2 132578562 132590803 + MGP_129S1SvImJ_P0057593 Slc20a1 protein_coding protein_coding MGP_129S1SvImJ_T0057594.1 MGP_129S1SvImJ_G0026485.1 mouse_genomes_project 2 132585513 132587452 + Slc20a1 protein_coding retained_intron MGP_129S1SvImJ_T0057595.1 MGP_129S1SvImJ_G0026485.1 mouse_genomes_project 2 132586553 132587220 + Slc20a1 protein_coding retained_intron MGP_129S1SvImJ_T0054806.1 MGP_129S1SvImJ_G0025741.1 mouse_genomes_project 2 53862278 54557917 + MGP_129S1SvImJ_P0054806 Galnt13 protein_coding protein_coding MGP_129S1SvImJ_T0054807.1 MGP_129S1SvImJ_G0025741.1 mouse_genomes_project 2 53862348 54557917 + MGP_129S1SvImJ_P0054807 Galnt13 protein_coding protein_coding MGP_129S1SvImJ_T0054808.1 MGP_129S1SvImJ_G0025741.1 mouse_genomes_project 2 53862348 54557917 + MGP_129S1SvImJ_P0054808 Galnt13 protein_coding protein_coding MGP_129S1SvImJ_T0054809.1 MGP_129S1SvImJ_G0025741.1 mouse_genomes_project 2 53862452 54145471 + MGP_129S1SvImJ_P0054809 Galnt13 protein_coding protein_coding MGP_129S1SvImJ_T0054810.1 MGP_129S1SvImJ_G0025741.1 mouse_genomes_project 2 53948890 54550178 + MGP_129S1SvImJ_P0054810 Galnt13 protein_coding protein_coding MGP_129S1SvImJ_T0055826.1 MGP_129S1SvImJ_G0026023.1 mouse_genomes_project 2 88804459 88805395 - MGP_129S1SvImJ_P0055826 Olfr1138 protein_coding protein_coding MGP_129S1SvImJ_T0056852.1 MGP_129S1SvImJ_G0026331.1 mouse_genomes_project 2 121846410 121857198 + MGP_129S1SvImJ_P0056852 Rad51 protein_coding protein_coding MGP_129S1SvImJ_T0056853.1 MGP_129S1SvImJ_G0026331.1 mouse_genomes_project 2 121846424 121870243 + MGP_129S1SvImJ_P0056853 Rad51 protein_coding protein_coding MGP_129S1SvImJ_T0056854.1 MGP_129S1SvImJ_G0026331.1 mouse_genomes_project 2 121846431 121866556 + Rad51 protein_coding retained_intron MGP_129S1SvImJ_T0056855.1 MGP_129S1SvImJ_G0026331.1 mouse_genomes_project 2 121846434 121869991 + MGP_129S1SvImJ_P0056855 Rad51 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056856.1 MGP_129S1SvImJ_G0026331.1 mouse_genomes_project 2 121854093 121855545 + Rad51 protein_coding retained_intron MGP_129S1SvImJ_T0056857.1 MGP_129S1SvImJ_G0026331.1 mouse_genomes_project 2 121857085 121881244 + MGP_129S1SvImJ_P0056857 Rad51 protein_coding protein_coding MGP_129S1SvImJ_T0056858.1 MGP_129S1SvImJ_G0026331.1 mouse_genomes_project 2 121864466 121867416 + Rad51 protein_coding retained_intron MGP_129S1SvImJ_T0056859.1 MGP_129S1SvImJ_G0026331.1 mouse_genomes_project 2 121867122 121868169 + Rad51 protein_coding retained_intron MGP_129S1SvImJ_T0053339.1 MGP_129S1SvImJ_G0025486.1 mouse_genomes_project 2 24332138 24338653 - MGP_129S1SvImJ_P0053339 Sdccag3 protein_coding protein_coding MGP_129S1SvImJ_T0053340.1 MGP_129S1SvImJ_G0025486.1 mouse_genomes_project 2 24332138 24338628 - MGP_129S1SvImJ_P0053340 Sdccag3 protein_coding protein_coding MGP_129S1SvImJ_T0053341.1 MGP_129S1SvImJ_G0025486.1 mouse_genomes_project 2 24332138 24338634 - MGP_129S1SvImJ_P0053341 Sdccag3 protein_coding protein_coding MGP_129S1SvImJ_T0053342.1 MGP_129S1SvImJ_G0025486.1 mouse_genomes_project 2 24332138 24338641 - MGP_129S1SvImJ_P0053342 Sdccag3 protein_coding protein_coding MGP_129S1SvImJ_T0053343.1 MGP_129S1SvImJ_G0025486.1 mouse_genomes_project 2 24332139 24336918 - Sdccag3 protein_coding processed_transcript MGP_129S1SvImJ_T0053344.1 MGP_129S1SvImJ_G0025486.1 mouse_genomes_project 2 24332891 24334550 - Sdccag3 protein_coding processed_transcript MGP_129S1SvImJ_T0053345.1 MGP_129S1SvImJ_G0025486.1 mouse_genomes_project 2 24332900 24334946 - Sdccag3 protein_coding processed_transcript MGP_129S1SvImJ_T0053346.1 MGP_129S1SvImJ_G0025486.1 mouse_genomes_project 2 24335991 24338643 - Sdccag3 protein_coding processed_transcript MGP_129S1SvImJ_T0053347.1 MGP_129S1SvImJ_G0025486.1 mouse_genomes_project 2 24335991 24338620 - Sdccag3 protein_coding processed_transcript MGP_129S1SvImJ_T0053348.1 MGP_129S1SvImJ_G0025486.1 mouse_genomes_project 2 24336349 24338632 - Sdccag3 protein_coding processed_transcript MGP_129S1SvImJ_T0053349.1 MGP_129S1SvImJ_G0025486.1 mouse_genomes_project 2 24336441 24338031 - MGP_129S1SvImJ_P0053349 Sdccag3 protein_coding protein_coding MGP_129S1SvImJ_T0053350.1 MGP_129S1SvImJ_G0025486.1 mouse_genomes_project 2 24336462 24338604 - Sdccag3 protein_coding processed_transcript MGP_129S1SvImJ_T0053351.1 MGP_129S1SvImJ_G0025486.1 mouse_genomes_project 2 24336892 24338502 - Sdccag3 protein_coding processed_transcript MGP_129S1SvImJ_T0017909.1 MGP_129S1SvImJ_G0015473.1 mouse_genomes_project 2 135369629 135398374 - 5330413P13Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017910.1 MGP_129S1SvImJ_G0015473.1 mouse_genomes_project 2 135394337 135398379 - 5330413P13Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017911.1 MGP_129S1SvImJ_G0015473.1 mouse_genomes_project 2 135394554 135398342 - 5330413P13Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0054499.1 MGP_129S1SvImJ_G0025683.1 mouse_genomes_project 2 35677788 35678715 + MGP_129S1SvImJ_P0054499 Olfr357 protein_coding protein_coding MGP_129S1SvImJ_T0058014.1 MGP_129S1SvImJ_G0026581.1 mouse_genomes_project 2 148319316 148343527 - MGP_129S1SvImJ_P0058014 Snx5 protein_coding protein_coding MGP_129S1SvImJ_T0058015.1 MGP_129S1SvImJ_G0026581.1 mouse_genomes_project 2 148319316 148343193 - MGP_129S1SvImJ_P0058015 Snx5 protein_coding protein_coding MGP_129S1SvImJ_T0058016.1 MGP_129S1SvImJ_G0026581.1 mouse_genomes_project 2 148320304 148324321 - Snx5 protein_coding processed_transcript MGP_129S1SvImJ_T0058017.1 MGP_129S1SvImJ_G0026581.1 mouse_genomes_project 2 148325023 148326700 - Snx5 protein_coding processed_transcript MGP_129S1SvImJ_T0058018.1 MGP_129S1SvImJ_G0026581.1 mouse_genomes_project 2 148325984 148326679 - Snx5 protein_coding processed_transcript MGP_129S1SvImJ_T0058019.1 MGP_129S1SvImJ_G0026581.1 mouse_genomes_project 2 148326087 148333396 - Snx5 protein_coding processed_transcript MGP_129S1SvImJ_T0058020.1 MGP_129S1SvImJ_G0026581.1 mouse_genomes_project 2 148342080 148343405 - Snx5 protein_coding processed_transcript MGP_129S1SvImJ_T0059108.1 MGP_129S1SvImJ_G0026841.1 mouse_genomes_project 2 169605685 169612932 - MGP_129S1SvImJ_P0059108 Wfdc15b protein_coding protein_coding MGP_129S1SvImJ_T0059109.1 MGP_129S1SvImJ_G0026841.1 mouse_genomes_project 2 169605685 169612903 - MGP_129S1SvImJ_P0059109 Wfdc15b protein_coding protein_coding MGP_129S1SvImJ_T0059110.1 MGP_129S1SvImJ_G0026841.1 mouse_genomes_project 2 169605686 169606815 - MGP_129S1SvImJ_P0059110 Wfdc15b protein_coding protein_coding MGP_129S1SvImJ_T0013865.1 MGP_129S1SvImJ_G0011954.1 mouse_genomes_project 2 166045652 166046510 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056647.1 MGP_129S1SvImJ_G0026262.1 mouse_genomes_project 2 113870069 113871092 + MGP_129S1SvImJ_P0056647 protein_coding protein_coding MGP_129S1SvImJ_T0003928.1 MGP_129S1SvImJ_G0003512.1 mouse_genomes_project 2 17181894 17188078 - Ptf1aos antisense antisense MGP_129S1SvImJ_T0053645.1 MGP_129S1SvImJ_G0025541.1 mouse_genomes_project 2 27924897 27929112 + Gm13547 protein_coding processed_transcript MGP_129S1SvImJ_T0053647.1 MGP_129S1SvImJ_G0025541.1 mouse_genomes_project 2 27927198 27929762 + MGP_129S1SvImJ_P0053647 Gm13547 protein_coding protein_coding MGP_129S1SvImJ_T0053648.1 MGP_129S1SvImJ_G0025541.1 mouse_genomes_project 2 27927233 27929640 + MGP_129S1SvImJ_P0053648 Gm13547 protein_coding protein_coding MGP_129S1SvImJ_T0056484.1 MGP_129S1SvImJ_G0026216.1 mouse_genomes_project 2 106226702 106510354 - MGP_129S1SvImJ_P0056484 D430041D05Rik protein_coding protein_coding MGP_129S1SvImJ_T0056485.1 MGP_129S1SvImJ_G0026216.1 mouse_genomes_project 2 106230669 106319153 - D430041D05Rik protein_coding retained_intron MGP_129S1SvImJ_T0056486.1 MGP_129S1SvImJ_G0026216.1 mouse_genomes_project 2 106232402 106347634 - MGP_129S1SvImJ_P0056486 D430041D05Rik protein_coding protein_coding MGP_129S1SvImJ_T0056487.1 MGP_129S1SvImJ_G0026216.1 mouse_genomes_project 2 106235799 106242047 - D430041D05Rik protein_coding retained_intron MGP_129S1SvImJ_T0056488.1 MGP_129S1SvImJ_G0026216.1 mouse_genomes_project 2 106272775 106329846 - D430041D05Rik protein_coding retained_intron MGP_129S1SvImJ_T0056489.1 MGP_129S1SvImJ_G0026216.1 mouse_genomes_project 2 106296242 106346800 - D430041D05Rik protein_coding retained_intron MGP_129S1SvImJ_T0056490.1 MGP_129S1SvImJ_G0026216.1 mouse_genomes_project 2 106343940 106510012 - MGP_129S1SvImJ_P0056490 D430041D05Rik protein_coding protein_coding MGP_129S1SvImJ_T0056491.1 MGP_129S1SvImJ_G0026216.1 mouse_genomes_project 2 106344233 106510013 - MGP_129S1SvImJ_P0056491 D430041D05Rik protein_coding protein_coding MGP_129S1SvImJ_T0007380.1 MGP_129S1SvImJ_G0006053.1 mouse_genomes_project 2 162614181 162615919 - Platr27 lincRNA lincRNA MGP_129S1SvImJ_T0059818.1 MGP_129S1SvImJ_G0027013.1 mouse_genomes_project 2 187769030 187778086 - MGP_129S1SvImJ_P0059818 Ptk6 protein_coding protein_coding MGP_129S1SvImJ_T0101676.1 MGP_129S1SvImJ_G0039697.1 mouse_genomes_project 2 135396058 135396298 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0055898.1 MGP_129S1SvImJ_G0026089.1 mouse_genomes_project 2 90458013 90459032 - MGP_129S1SvImJ_P0055898 Olfr1229 protein_coding protein_coding MGP_129S1SvImJ_T0055899.1 MGP_129S1SvImJ_G0026089.1 mouse_genomes_project 2 90458070 90463829 - MGP_129S1SvImJ_P0055899 Olfr1229 protein_coding protein_coding MGP_129S1SvImJ_T0017787.1 MGP_129S1SvImJ_G0015407.1 mouse_genomes_project 2 27369308 27377191 - 6530402F18Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017788.1 MGP_129S1SvImJ_G0015407.1 mouse_genomes_project 2 27375106 27377204 - 6530402F18Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0055862.1 MGP_129S1SvImJ_G0026057.1 mouse_genomes_project 2 89642452 89643364 + MGP_129S1SvImJ_P0055862 Olfr1186 protein_coding protein_coding MGP_129S1SvImJ_T0056319.1 MGP_129S1SvImJ_G0026183.1 mouse_genomes_project 2 95502667 95506938 - Alkbh3 protein_coding processed_transcript MGP_129S1SvImJ_T0056320.1 MGP_129S1SvImJ_G0026183.1 mouse_genomes_project 2 95502667 95506969 - Alkbh3 protein_coding processed_transcript MGP_129S1SvImJ_T0056321.1 MGP_129S1SvImJ_G0026183.1 mouse_genomes_project 2 95502667 95532897 - MGP_129S1SvImJ_P0056321 Alkbh3 protein_coding protein_coding MGP_129S1SvImJ_T0056322.1 MGP_129S1SvImJ_G0026183.1 mouse_genomes_project 2 95502746 95503744 - Alkbh3 protein_coding processed_transcript MGP_129S1SvImJ_T0056323.1 MGP_129S1SvImJ_G0026183.1 mouse_genomes_project 2 95502754 95532820 - MGP_129S1SvImJ_P0056323 Alkbh3 protein_coding protein_coding MGP_129S1SvImJ_T0056324.1 MGP_129S1SvImJ_G0026183.1 mouse_genomes_project 2 95518293 95532521 - Alkbh3 protein_coding processed_transcript MGP_129S1SvImJ_T0056325.1 MGP_129S1SvImJ_G0026183.1 mouse_genomes_project 2 95518362 95527276 - Alkbh3 protein_coding processed_transcript MGP_129S1SvImJ_T0056326.1 MGP_129S1SvImJ_G0026183.1 mouse_genomes_project 2 95518362 95532844 - MGP_129S1SvImJ_P0056326 Alkbh3 protein_coding protein_coding MGP_129S1SvImJ_T0056327.1 MGP_129S1SvImJ_G0026183.1 mouse_genomes_project 2 95527862 95532844 - Alkbh3 protein_coding processed_transcript MGP_129S1SvImJ_T0056328.1 MGP_129S1SvImJ_G0026183.1 mouse_genomes_project 2 95528332 95532842 - Alkbh3 protein_coding processed_transcript MGP_129S1SvImJ_T0056329.1 MGP_129S1SvImJ_G0026183.1 mouse_genomes_project 2 95530125 95532842 - Alkbh3 protein_coding processed_transcript MGP_129S1SvImJ_T0007211.1 MGP_129S1SvImJ_G0005915.1 mouse_genomes_project 2 50933083 51012242 - Gm13490 lincRNA lincRNA MGP_129S1SvImJ_T0055671.1 MGP_129S1SvImJ_G0025914.1 mouse_genomes_project 2 85539224 85564844 + MGP_129S1SvImJ_P0055671 Slc43a1 protein_coding protein_coding MGP_129S1SvImJ_T0055672.1 MGP_129S1SvImJ_G0025914.1 mouse_genomes_project 2 85539769 85551384 + MGP_129S1SvImJ_P0055672 Slc43a1 protein_coding protein_coding MGP_129S1SvImJ_T0055673.1 MGP_129S1SvImJ_G0025914.1 mouse_genomes_project 2 85539782 85564852 + MGP_129S1SvImJ_P0055673 Slc43a1 protein_coding protein_coding MGP_129S1SvImJ_T0055674.1 MGP_129S1SvImJ_G0025914.1 mouse_genomes_project 2 85539791 85563654 + Slc43a1 protein_coding retained_intron MGP_129S1SvImJ_T0055675.1 MGP_129S1SvImJ_G0025914.1 mouse_genomes_project 2 85540573 85564847 + MGP_129S1SvImJ_P0055675 Slc43a1 protein_coding protein_coding MGP_129S1SvImJ_T0055676.1 MGP_129S1SvImJ_G0025914.1 mouse_genomes_project 2 85540999 85564860 + MGP_129S1SvImJ_P0055676 Slc43a1 protein_coding protein_coding MGP_129S1SvImJ_T0055845.1 MGP_129S1SvImJ_G0026041.1 mouse_genomes_project 2 89090255 89091197 - MGP_129S1SvImJ_P0055845 Olfr73 protein_coding protein_coding MGP_129S1SvImJ_T0007370.1 MGP_129S1SvImJ_G0006046.1 mouse_genomes_project 2 159498403 159499702 - Gm14216 lincRNA lincRNA MGP_129S1SvImJ_T0007371.1 MGP_129S1SvImJ_G0006046.1 mouse_genomes_project 2 159498421 159517203 - Gm14216 lincRNA lincRNA MGP_129S1SvImJ_T0013723.1 MGP_129S1SvImJ_G0011812.1 mouse_genomes_project 2 110736947 110737575 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054488.1 MGP_129S1SvImJ_G0025673.1 mouse_genomes_project 2 35463998 35467190 + MGP_129S1SvImJ_P0054488 Olfr348 protein_coding protein_coding MGP_129S1SvImJ_T0054489.1 MGP_129S1SvImJ_G0025673.1 mouse_genomes_project 2 35466248 35467190 + MGP_129S1SvImJ_P0054489 Olfr348 protein_coding protein_coding MGP_129S1SvImJ_T0055252.1 MGP_129S1SvImJ_G0025822.1 mouse_genomes_project 2 71490554 71552992 + MGP_129S1SvImJ_P0055252 Hat1 protein_coding protein_coding MGP_129S1SvImJ_T0055253.1 MGP_129S1SvImJ_G0025822.1 mouse_genomes_project 2 71490856 71552992 + MGP_129S1SvImJ_P0055253 Hat1 protein_coding protein_coding MGP_129S1SvImJ_T0055254.1 MGP_129S1SvImJ_G0025822.1 mouse_genomes_project 2 71525020 71546756 + Hat1 protein_coding processed_transcript MGP_129S1SvImJ_T0056789.1 MGP_129S1SvImJ_G0026316.1 mouse_genomes_project 2 121216264 121237042 - MGP_129S1SvImJ_P0056789 Bmf protein_coding protein_coding MGP_129S1SvImJ_T0056790.1 MGP_129S1SvImJ_G0026316.1 mouse_genomes_project 2 121217739 121234911 - MGP_129S1SvImJ_P0056790 Bmf protein_coding protein_coding MGP_129S1SvImJ_T0056791.1 MGP_129S1SvImJ_G0026316.1 mouse_genomes_project 2 121219476 121232092 - Bmf protein_coding processed_transcript MGP_129S1SvImJ_T0056792.1 MGP_129S1SvImJ_G0026316.1 mouse_genomes_project 2 121219557 121232822 - Bmf protein_coding processed_transcript MGP_129S1SvImJ_T0056793.1 MGP_129S1SvImJ_G0026316.1 mouse_genomes_project 2 121219923 121237017 - Bmf protein_coding processed_transcript MGP_129S1SvImJ_T0056794.1 MGP_129S1SvImJ_G0026316.1 mouse_genomes_project 2 121232689 121234533 - Bmf protein_coding processed_transcript MGP_129S1SvImJ_T0056795.1 MGP_129S1SvImJ_G0026316.1 mouse_genomes_project 2 121232741 121234951 - Bmf protein_coding processed_transcript MGP_129S1SvImJ_T0056796.1 MGP_129S1SvImJ_G0026316.1 mouse_genomes_project 2 121234414 121237030 - Bmf protein_coding processed_transcript MGP_129S1SvImJ_T0101000.1 MGP_129S1SvImJ_G0039067.1 mouse_genomes_project 2 172764346 172764435 + Gm23201 snoRNA snoRNA MGP_129S1SvImJ_T0007200.1 MGP_129S1SvImJ_G0005905.1 mouse_genomes_project 2 44840930 44860780 + Gm13465 lincRNA lincRNA MGP_129S1SvImJ_T0013635.1 MGP_129S1SvImJ_G0011724.1 mouse_genomes_project 2 81490400 81492809 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054339.1 MGP_129S1SvImJ_G0025641.1 mouse_genomes_project 2 33384861 33408486 - MGP_129S1SvImJ_P0054339 Rabepk protein_coding protein_coding MGP_129S1SvImJ_T0054340.1 MGP_129S1SvImJ_G0025641.1 mouse_genomes_project 2 33384881 33408636 - MGP_129S1SvImJ_P0054340 Rabepk protein_coding protein_coding MGP_129S1SvImJ_T0054341.1 MGP_129S1SvImJ_G0025641.1 mouse_genomes_project 2 33385072 33404179 - MGP_129S1SvImJ_P0054341 Rabepk protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054342.1 MGP_129S1SvImJ_G0025641.1 mouse_genomes_project 2 33390150 33408732 - MGP_129S1SvImJ_P0054342 Rabepk protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054343.1 MGP_129S1SvImJ_G0025641.1 mouse_genomes_project 2 33390542 33408769 - MGP_129S1SvImJ_P0054343 Rabepk protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054344.1 MGP_129S1SvImJ_G0025641.1 mouse_genomes_project 2 33391014 33408622 - Rabepk protein_coding retained_intron MGP_129S1SvImJ_T0057463.1 MGP_129S1SvImJ_G0026450.1 mouse_genomes_project 2 130395783 130400452 - MGP_129S1SvImJ_P0057463 Itpripl1 protein_coding protein_coding MGP_129S1SvImJ_T0057464.1 MGP_129S1SvImJ_G0026450.1 mouse_genomes_project 2 130397418 130400316 - MGP_129S1SvImJ_P0057464 Itpripl1 protein_coding protein_coding MGP_129S1SvImJ_T0057465.1 MGP_129S1SvImJ_G0026450.1 mouse_genomes_project 2 130397538 130399600 - MGP_129S1SvImJ_P0057465 Itpripl1 protein_coding protein_coding MGP_129S1SvImJ_T0013480.1 MGP_129S1SvImJ_G0011569.1 mouse_genomes_project 2 23933167 23933804 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010498.1 MGP_129S1SvImJ_G0008614.1 mouse_genomes_project 2 175013152 175013273 + Gm26469 miRNA miRNA MGP_129S1SvImJ_T0004163.1 MGP_129S1SvImJ_G0003683.1 mouse_genomes_project 2 165945011 165952994 - Gm27206 antisense antisense MGP_129S1SvImJ_T0099714.1 MGP_129S1SvImJ_G0037781.1 mouse_genomes_project 2 187237064 187237171 + Gm22502 snRNA snRNA MGP_129S1SvImJ_T0017795.1 MGP_129S1SvImJ_G0015412.1 mouse_genomes_project 2 30454435 30474541 - Gm16534 processed_transcript processed_transcript MGP_129S1SvImJ_T0017796.1 MGP_129S1SvImJ_G0015412.1 mouse_genomes_project 2 30455230 30475288 - Gm16534 processed_transcript processed_transcript MGP_129S1SvImJ_T0013568.1 MGP_129S1SvImJ_G0011657.1 mouse_genomes_project 2 58664139 58664664 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003951.1 MGP_129S1SvImJ_G0003528.1 mouse_genomes_project 2 25009547 25013103 + Gm13398 antisense antisense MGP_129S1SvImJ_T0057897.1 MGP_129S1SvImJ_G0026554.1 mouse_genomes_project 2 138471800 139192110 + MGP_129S1SvImJ_P0057897 Plcb1 protein_coding protein_coding MGP_129S1SvImJ_T0057898.1 MGP_129S1SvImJ_G0026554.1 mouse_genomes_project 2 138471892 139192121 + MGP_129S1SvImJ_P0057898 Plcb1 protein_coding protein_coding MGP_129S1SvImJ_T0057899.1 MGP_129S1SvImJ_G0026554.1 mouse_genomes_project 2 138471908 138684421 + Plcb1 protein_coding retained_intron MGP_129S1SvImJ_T0057900.1 MGP_129S1SvImJ_G0026554.1 mouse_genomes_project 2 138471962 138960519 + Plcb1 protein_coding retained_intron MGP_129S1SvImJ_T0057901.1 MGP_129S1SvImJ_G0026554.1 mouse_genomes_project 2 138472263 139109642 + MGP_129S1SvImJ_P0057901 Plcb1 protein_coding protein_coding MGP_129S1SvImJ_T0057902.1 MGP_129S1SvImJ_G0026554.1 mouse_genomes_project 2 138925475 138968141 + Plcb1 protein_coding processed_transcript MGP_129S1SvImJ_T0057903.1 MGP_129S1SvImJ_G0026554.1 mouse_genomes_project 2 138925522 138968146 + MGP_129S1SvImJ_P0057903 Plcb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057904.1 MGP_129S1SvImJ_G0026554.1 mouse_genomes_project 2 138955865 138961408 + Plcb1 protein_coding processed_transcript MGP_129S1SvImJ_T0102425.1 MGP_129S1SvImJ_G0040259.1 mouse_genomes_project 2 89399652 89400854 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0056622.1 MGP_129S1SvImJ_G0026245.1 mouse_genomes_project 2 112712772 112715039 - MGP_129S1SvImJ_P0056622 Fibin protein_coding protein_coding MGP_129S1SvImJ_T0058089.1 MGP_129S1SvImJ_G0026597.1 mouse_genomes_project 2 150102861 150133855 + MGP_129S1SvImJ_P0058089 protein_coding protein_coding MGP_129S1SvImJ_T0058090.1 MGP_129S1SvImJ_G0026597.1 mouse_genomes_project 2 150102861 150208532 + MGP_129S1SvImJ_P0058090 protein_coding protein_coding MGP_129S1SvImJ_T0058091.1 MGP_129S1SvImJ_G0026597.1 mouse_genomes_project 2 150102882 150133082 + MGP_129S1SvImJ_P0058091 protein_coding protein_coding MGP_129S1SvImJ_T0058092.1 MGP_129S1SvImJ_G0026597.1 mouse_genomes_project 2 150102882 150135852 + MGP_129S1SvImJ_P0058092 protein_coding protein_coding MGP_129S1SvImJ_T0058093.1 MGP_129S1SvImJ_G0026597.1 mouse_genomes_project 2 150102885 150132937 + MGP_129S1SvImJ_P0058093 protein_coding protein_coding MGP_129S1SvImJ_T0058094.1 MGP_129S1SvImJ_G0026597.1 mouse_genomes_project 2 150102891 150390160 + MGP_129S1SvImJ_P0058094 protein_coding protein_coding MGP_129S1SvImJ_T0058095.1 MGP_129S1SvImJ_G0026597.1 mouse_genomes_project 2 150102893 150123424 + MGP_129S1SvImJ_P0058095 protein_coding protein_coding MGP_129S1SvImJ_T0058096.1 MGP_129S1SvImJ_G0026597.1 mouse_genomes_project 2 150206952 150270109 + protein_coding processed_transcript MGP_129S1SvImJ_T0058097.1 MGP_129S1SvImJ_G0026597.1 mouse_genomes_project 2 150210784 150307957 + protein_coding retained_intron MGP_129S1SvImJ_T0058098.1 MGP_129S1SvImJ_G0026597.1 mouse_genomes_project 2 150210916 150308088 + MGP_129S1SvImJ_P0058098 protein_coding protein_coding MGP_129S1SvImJ_T0058099.1 MGP_129S1SvImJ_G0026597.1 mouse_genomes_project 2 150212723 150390156 + protein_coding processed_transcript MGP_129S1SvImJ_T0058100.1 MGP_129S1SvImJ_G0026597.1 mouse_genomes_project 2 150326983 150390081 + protein_coding processed_transcript MGP_129S1SvImJ_T0058101.1 MGP_129S1SvImJ_G0026597.1 mouse_genomes_project 2 150389385 150390156 + protein_coding processed_transcript MGP_129S1SvImJ_T0058102.1 MGP_129S1SvImJ_G0026597.1 mouse_genomes_project 2 150389733 150389916 + MGP_129S1SvImJ_P0058102 protein_coding protein_coding MGP_129S1SvImJ_T0101669.1 MGP_129S1SvImJ_G0039691.1 mouse_genomes_project 2 50701946 50702301 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101670.1 MGP_129S1SvImJ_G0039691.1 mouse_genomes_project 2 50702094 50702245 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0059130.1 MGP_129S1SvImJ_G0026851.1 mouse_genomes_project 2 169865996 169884966 - MGP_129S1SvImJ_P0059130 Sdc4 protein_coding protein_coding MGP_129S1SvImJ_T0059131.1 MGP_129S1SvImJ_G0026851.1 mouse_genomes_project 2 169867670 169885667 - Sdc4 protein_coding processed_transcript MGP_129S1SvImJ_T0013537.1 MGP_129S1SvImJ_G0011626.1 mouse_genomes_project 2 49646721 49647003 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055110.1 MGP_129S1SvImJ_G0025794.1 mouse_genomes_project 2 69062528 69120361 + MGP_129S1SvImJ_P0055110 Nostrin protein_coding protein_coding MGP_129S1SvImJ_T0055111.1 MGP_129S1SvImJ_G0025794.1 mouse_genomes_project 2 69109397 69116587 + Nostrin protein_coding processed_transcript MGP_129S1SvImJ_T0057928.1 MGP_129S1SvImJ_G0026558.1 mouse_genomes_project 2 140282207 140295813 + protein_coding processed_transcript MGP_129S1SvImJ_T0057929.1 MGP_129S1SvImJ_G0026558.1 mouse_genomes_project 2 140282252 140287045 + protein_coding processed_transcript MGP_129S1SvImJ_T0057930.1 MGP_129S1SvImJ_G0026558.1 mouse_genomes_project 2 140282288 140329868 + MGP_129S1SvImJ_P0057930 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057931.1 MGP_129S1SvImJ_G0026558.1 mouse_genomes_project 2 140282478 140294512 + protein_coding processed_transcript MGP_129S1SvImJ_T0057932.1 MGP_129S1SvImJ_G0026558.1 mouse_genomes_project 2 140295816 140328646 + MGP_129S1SvImJ_P0057932 protein_coding protein_coding MGP_129S1SvImJ_T0057933.1 MGP_129S1SvImJ_G0026558.1 mouse_genomes_project 2 140310913 140340524 + MGP_129S1SvImJ_P0057933 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0057934.1 MGP_129S1SvImJ_G0026558.1 mouse_genomes_project 2 140331340 140332136 + protein_coding processed_transcript MGP_129S1SvImJ_T0057935.1 MGP_129S1SvImJ_G0026558.1 mouse_genomes_project 2 140331355 140334310 + protein_coding processed_transcript MGP_129S1SvImJ_T0007301.1 MGP_129S1SvImJ_G0005990.1 mouse_genomes_project 2 117418177 117754452 - lincRNA lincRNA MGP_129S1SvImJ_T0007243.1 MGP_129S1SvImJ_G0005942.1 mouse_genomes_project 2 75064850 75066935 - Haglr lincRNA lincRNA MGP_129S1SvImJ_T0007244.1 MGP_129S1SvImJ_G0005942.1 mouse_genomes_project 2 75066861 75080355 - Haglr lincRNA lincRNA MGP_129S1SvImJ_T0054286.1 MGP_129S1SvImJ_G0025633.1 mouse_genomes_project 2 31923187 31952255 - MGP_129S1SvImJ_P0054286 Zbtb34 protein_coding protein_coding MGP_129S1SvImJ_T0054287.1 MGP_129S1SvImJ_G0025633.1 mouse_genomes_project 2 31923187 31949153 - MGP_129S1SvImJ_P0054287 Zbtb34 protein_coding protein_coding MGP_129S1SvImJ_T0054288.1 MGP_129S1SvImJ_G0025633.1 mouse_genomes_project 2 31928998 31952248 - Zbtb34 protein_coding processed_transcript MGP_129S1SvImJ_T0010350.1 MGP_129S1SvImJ_G0008466.1 mouse_genomes_project 2 7822097 7822205 + Gm22677 miRNA miRNA MGP_129S1SvImJ_T0055884.1 MGP_129S1SvImJ_G0026076.1 mouse_genomes_project 2 90161967 90162903 - MGP_129S1SvImJ_P0055884 Olfr1214 protein_coding protein_coding MGP_129S1SvImJ_T0054446.1 MGP_129S1SvImJ_G0025657.1 mouse_genomes_project 2 34413385 34659607 - MGP_129S1SvImJ_P0054446 Ttll11 protein_coding protein_coding MGP_129S1SvImJ_T0054447.1 MGP_129S1SvImJ_G0025657.1 mouse_genomes_project 2 34413385 34659607 - MGP_129S1SvImJ_P0054447 Ttll11 protein_coding protein_coding MGP_129S1SvImJ_T0054448.1 MGP_129S1SvImJ_G0025657.1 mouse_genomes_project 2 34413806 34659749 - MGP_129S1SvImJ_P0054448 Ttll11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054449.1 MGP_129S1SvImJ_G0025657.1 mouse_genomes_project 2 34414091 34613908 - MGP_129S1SvImJ_P0054449 Ttll11 protein_coding protein_coding MGP_129S1SvImJ_T0054450.1 MGP_129S1SvImJ_G0025657.1 mouse_genomes_project 2 34450938 34552573 - Ttll11 protein_coding processed_transcript MGP_129S1SvImJ_T0054451.1 MGP_129S1SvImJ_G0025657.1 mouse_genomes_project 2 34559840 34618049 - Ttll11 protein_coding processed_transcript MGP_129S1SvImJ_T0054452.1 MGP_129S1SvImJ_G0025657.1 mouse_genomes_project 2 34572905 34659896 - Ttll11 protein_coding processed_transcript MGP_129S1SvImJ_T0054453.1 MGP_129S1SvImJ_G0025657.1 mouse_genomes_project 2 34573200 34623693 - MGP_129S1SvImJ_P0054453 Ttll11 protein_coding protein_coding MGP_129S1SvImJ_T0054454.1 MGP_129S1SvImJ_G0025657.1 mouse_genomes_project 2 34573220 34626701 - MGP_129S1SvImJ_P0054454 Ttll11 protein_coding protein_coding MGP_129S1SvImJ_T0100920.1 MGP_129S1SvImJ_G0038987.1 mouse_genomes_project 2 24610405 24610532 - Snora43 snoRNA snoRNA MGP_129S1SvImJ_T0057840.1 MGP_129S1SvImJ_G0026539.1 mouse_genomes_project 2 135809840 135819021 - MGP_129S1SvImJ_P0057840 Tmem230 protein_coding protein_coding MGP_129S1SvImJ_T0057841.1 MGP_129S1SvImJ_G0026539.1 mouse_genomes_project 2 135816686 135819130 - Tmem230 protein_coding processed_transcript MGP_129S1SvImJ_T0057842.1 MGP_129S1SvImJ_G0026539.1 mouse_genomes_project 2 135817218 135819127 - Tmem230 protein_coding retained_intron MGP_129S1SvImJ_T0000368.1 MGP_129S1SvImJ_G0000310.1 mouse_genomes_project 2 20296219 20296289 - mt-Td Mt_tRNA Mt_tRNA MGP_129S1SvImJ_T0059566.1 MGP_129S1SvImJ_G0026955.1 mouse_genomes_project 2 179466958 179478913 - MGP_129S1SvImJ_P0059566 Zbp1 protein_coding protein_coding MGP_129S1SvImJ_T0059567.1 MGP_129S1SvImJ_G0026955.1 mouse_genomes_project 2 179466961 179478887 - Zbp1 protein_coding retained_intron MGP_129S1SvImJ_T0059568.1 MGP_129S1SvImJ_G0026955.1 mouse_genomes_project 2 179473757 179478900 - MGP_129S1SvImJ_P0059568 Zbp1 protein_coding protein_coding MGP_129S1SvImJ_T0003934.1 MGP_129S1SvImJ_G0003518.1 mouse_genomes_project 2 19159435 19189308 - Gm13327 antisense antisense MGP_129S1SvImJ_T0007182.1 MGP_129S1SvImJ_G0005892.1 mouse_genomes_project 2 32258206 32260742 - 9430024E24Rik lincRNA lincRNA MGP_129S1SvImJ_T0055194.1 MGP_129S1SvImJ_G0025813.1 mouse_genomes_project 2 70602772 70619489 + MGP_129S1SvImJ_P0055194 Gad1 protein_coding protein_coding MGP_129S1SvImJ_T0055195.1 MGP_129S1SvImJ_G0025813.1 mouse_genomes_project 2 70614298 70655317 + MGP_129S1SvImJ_P0055195 Gad1 protein_coding protein_coding MGP_129S1SvImJ_T0055196.1 MGP_129S1SvImJ_G0025813.1 mouse_genomes_project 2 70614298 70639356 + MGP_129S1SvImJ_P0055196 Gad1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055197.1 MGP_129S1SvImJ_G0025813.1 mouse_genomes_project 2 70614419 70629378 + Gad1 protein_coding retained_intron MGP_129S1SvImJ_T0055198.1 MGP_129S1SvImJ_G0025813.1 mouse_genomes_project 2 70614452 70636848 + MGP_129S1SvImJ_P0055198 Gad1 protein_coding protein_coding MGP_129S1SvImJ_T0055199.1 MGP_129S1SvImJ_G0025813.1 mouse_genomes_project 2 70615154 70637369 + MGP_129S1SvImJ_P0055199 Gad1 protein_coding protein_coding MGP_129S1SvImJ_T0055200.1 MGP_129S1SvImJ_G0025813.1 mouse_genomes_project 2 70615697 70638194 + MGP_129S1SvImJ_P0055200 Gad1 protein_coding protein_coding MGP_129S1SvImJ_T0055201.1 MGP_129S1SvImJ_G0025813.1 mouse_genomes_project 2 70618632 70655315 + Gad1 protein_coding processed_transcript MGP_129S1SvImJ_T0004136.1 MGP_129S1SvImJ_G0003658.1 mouse_genomes_project 2 150440612 150448487 + A930019D19Rik antisense antisense MGP_129S1SvImJ_T0052660.1 MGP_129S1SvImJ_G0025360.1 mouse_genomes_project 2 11580744 11655747 + MGP_129S1SvImJ_P0052660 Stam protein_coding protein_coding MGP_129S1SvImJ_T0052661.1 MGP_129S1SvImJ_G0025360.1 mouse_genomes_project 2 11580754 11634745 + Stam protein_coding processed_transcript MGP_129S1SvImJ_T0052662.1 MGP_129S1SvImJ_G0025360.1 mouse_genomes_project 2 11580835 11650478 + MGP_129S1SvImJ_P0052662 Stam protein_coding protein_coding MGP_129S1SvImJ_T0052663.1 MGP_129S1SvImJ_G0025360.1 mouse_genomes_project 2 11580868 11653653 + MGP_129S1SvImJ_P0052663 Stam protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052664.1 MGP_129S1SvImJ_G0025360.1 mouse_genomes_project 2 11581073 11635205 + MGP_129S1SvImJ_P0052664 Stam protein_coding protein_coding MGP_129S1SvImJ_T0052665.1 MGP_129S1SvImJ_G0025360.1 mouse_genomes_project 2 11634468 11635300 + Stam protein_coding retained_intron MGP_129S1SvImJ_T0052666.1 MGP_129S1SvImJ_G0025360.1 mouse_genomes_project 2 11635178 11637522 + Stam protein_coding processed_transcript MGP_129S1SvImJ_T0052667.1 MGP_129S1SvImJ_G0025360.1 mouse_genomes_project 2 11636975 11645295 + Stam protein_coding retained_intron MGP_129S1SvImJ_T0052668.1 MGP_129S1SvImJ_G0025360.1 mouse_genomes_project 2 11640253 11645237 + Stam protein_coding retained_intron MGP_129S1SvImJ_T0052392.1 MGP_129S1SvImJ_G0025319.1 mouse_genomes_project 2 2079482 2101471 - MGP_129S1SvImJ_P0052392 Mcm10 protein_coding protein_coding MGP_129S1SvImJ_T0052393.1 MGP_129S1SvImJ_G0025319.1 mouse_genomes_project 2 2080492 2085611 - Mcm10 protein_coding retained_intron MGP_129S1SvImJ_T0052394.1 MGP_129S1SvImJ_G0025319.1 mouse_genomes_project 2 2080492 2091268 - Mcm10 protein_coding retained_intron MGP_129S1SvImJ_T0052395.1 MGP_129S1SvImJ_G0025319.1 mouse_genomes_project 2 2080492 2101913 - MGP_129S1SvImJ_P0052395 Mcm10 protein_coding protein_coding MGP_129S1SvImJ_T0052396.1 MGP_129S1SvImJ_G0025319.1 mouse_genomes_project 2 2080799 2082974 - Mcm10 protein_coding retained_intron MGP_129S1SvImJ_T0052397.1 MGP_129S1SvImJ_G0025319.1 mouse_genomes_project 2 2081028 2084555 - Mcm10 protein_coding retained_intron MGP_129S1SvImJ_T0052398.1 MGP_129S1SvImJ_G0025319.1 mouse_genomes_project 2 2088730 2094809 - Mcm10 protein_coding retained_intron MGP_129S1SvImJ_T0052399.1 MGP_129S1SvImJ_G0025319.1 mouse_genomes_project 2 2093751 2095029 - Mcm10 protein_coding retained_intron MGP_129S1SvImJ_T0052400.1 MGP_129S1SvImJ_G0025319.1 mouse_genomes_project 2 2096220 2101875 - Mcm10 protein_coding processed_transcript MGP_129S1SvImJ_T0052401.1 MGP_129S1SvImJ_G0025319.1 mouse_genomes_project 2 2096707 2101837 - Mcm10 protein_coding retained_intron MGP_129S1SvImJ_T0000369.1 MGP_129S1SvImJ_G0000311.1 mouse_genomes_project 2 20296292 20296361 + mt-Ts1 Mt_tRNA Mt_tRNA MGP_129S1SvImJ_T0053496.1 MGP_129S1SvImJ_G0025513.1 mouse_genomes_project 2 25239174 25410140 - MGP_129S1SvImJ_P0053496 Vav2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0053497.1 MGP_129S1SvImJ_G0025513.1 mouse_genomes_project 2 25239178 25410694 - MGP_129S1SvImJ_P0053497 Vav2 protein_coding protein_coding MGP_129S1SvImJ_T0053498.1 MGP_129S1SvImJ_G0025513.1 mouse_genomes_project 2 25239178 25410573 - MGP_129S1SvImJ_P0053498 Vav2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053499.1 MGP_129S1SvImJ_G0025513.1 mouse_genomes_project 2 25245529 25254090 - Vav2 protein_coding processed_transcript MGP_129S1SvImJ_T0053500.1 MGP_129S1SvImJ_G0025513.1 mouse_genomes_project 2 25245993 25255628 - Vav2 protein_coding processed_transcript MGP_129S1SvImJ_T0053501.1 MGP_129S1SvImJ_G0025513.1 mouse_genomes_project 2 25246655 25248873 - Vav2 protein_coding processed_transcript MGP_129S1SvImJ_T0053502.1 MGP_129S1SvImJ_G0025513.1 mouse_genomes_project 2 25246655 25248950 - Vav2 protein_coding processed_transcript MGP_129S1SvImJ_T0053503.1 MGP_129S1SvImJ_G0025513.1 mouse_genomes_project 2 25278753 25320980 - Vav2 protein_coding processed_transcript MGP_129S1SvImJ_T0098565.1 MGP_129S1SvImJ_G0036650.1 mouse_genomes_project 2 108183424 108183540 + n-R5s201 rRNA rRNA MGP_129S1SvImJ_T0054457.1 MGP_129S1SvImJ_G0025660.1 mouse_genomes_project 2 34762314 34784415 - MGP_129S1SvImJ_P0054457 Lhx6 protein_coding protein_coding MGP_129S1SvImJ_T0054458.1 MGP_129S1SvImJ_G0025660.1 mouse_genomes_project 2 34762314 34785625 - MGP_129S1SvImJ_P0054458 Lhx6 protein_coding protein_coding MGP_129S1SvImJ_T0054459.1 MGP_129S1SvImJ_G0025660.1 mouse_genomes_project 2 34762314 34785762 - MGP_129S1SvImJ_P0054459 Lhx6 protein_coding protein_coding MGP_129S1SvImJ_T0054460.1 MGP_129S1SvImJ_G0025660.1 mouse_genomes_project 2 34762314 34784415 - MGP_129S1SvImJ_P0054460 Lhx6 protein_coding protein_coding MGP_129S1SvImJ_T0054461.1 MGP_129S1SvImJ_G0025660.1 mouse_genomes_project 2 34762315 34785762 - MGP_129S1SvImJ_P0054461 Lhx6 protein_coding protein_coding MGP_129S1SvImJ_T0054462.1 MGP_129S1SvImJ_G0025660.1 mouse_genomes_project 2 34764046 34774634 - MGP_129S1SvImJ_P0054462 Lhx6 protein_coding protein_coding MGP_129S1SvImJ_T0054463.1 MGP_129S1SvImJ_G0025660.1 mouse_genomes_project 2 34764049 34785245 - MGP_129S1SvImJ_P0054463 Lhx6 protein_coding protein_coding MGP_129S1SvImJ_T0054464.1 MGP_129S1SvImJ_G0025660.1 mouse_genomes_project 2 34774585 34783947 - Lhx6 protein_coding retained_intron MGP_129S1SvImJ_T0054465.1 MGP_129S1SvImJ_G0025660.1 mouse_genomes_project 2 34781680 34785609 - Lhx6 protein_coding processed_transcript MGP_129S1SvImJ_T0003974.1 MGP_129S1SvImJ_G0003549.1 mouse_genomes_project 2 32174395 32175796 + C130021I20Rik antisense antisense MGP_129S1SvImJ_T0003975.1 MGP_129S1SvImJ_G0003549.1 mouse_genomes_project 2 32174533 32179557 + C130021I20Rik antisense antisense MGP_129S1SvImJ_T0054946.1 MGP_129S1SvImJ_G0025765.1 mouse_genomes_project 2 61241550 61319924 + MGP_129S1SvImJ_P0054946 Tank protein_coding protein_coding MGP_129S1SvImJ_T0054947.1 MGP_129S1SvImJ_G0025765.1 mouse_genomes_project 2 61241551 61319924 + MGP_129S1SvImJ_P0054947 Tank protein_coding protein_coding MGP_129S1SvImJ_T0054948.1 MGP_129S1SvImJ_G0025765.1 mouse_genomes_project 2 61241576 61319843 + Tank protein_coding processed_transcript MGP_129S1SvImJ_T0054949.1 MGP_129S1SvImJ_G0025765.1 mouse_genomes_project 2 61241576 61309673 + Tank protein_coding processed_transcript MGP_129S1SvImJ_T0054950.1 MGP_129S1SvImJ_G0025765.1 mouse_genomes_project 2 61259550 61319924 + MGP_129S1SvImJ_P0054950 Tank protein_coding protein_coding MGP_129S1SvImJ_T0054951.1 MGP_129S1SvImJ_G0025765.1 mouse_genomes_project 2 61259570 61319924 + MGP_129S1SvImJ_P0054951 Tank protein_coding protein_coding MGP_129S1SvImJ_T0054952.1 MGP_129S1SvImJ_G0025765.1 mouse_genomes_project 2 61259609 61317565 + MGP_129S1SvImJ_P0054952 Tank protein_coding protein_coding MGP_129S1SvImJ_T0054953.1 MGP_129S1SvImJ_G0025765.1 mouse_genomes_project 2 61259637 61282180 + Tank protein_coding processed_transcript MGP_129S1SvImJ_T0054954.1 MGP_129S1SvImJ_G0025765.1 mouse_genomes_project 2 61259638 61319843 + Tank protein_coding processed_transcript MGP_129S1SvImJ_T0054955.1 MGP_129S1SvImJ_G0025765.1 mouse_genomes_project 2 61293493 61311956 + Tank protein_coding processed_transcript MGP_129S1SvImJ_T0054956.1 MGP_129S1SvImJ_G0025765.1 mouse_genomes_project 2 61309596 61315743 + Tank protein_coding processed_transcript MGP_129S1SvImJ_T0010413.1 MGP_129S1SvImJ_G0008529.1 mouse_genomes_project 2 30455295 30455358 + Mir7674 miRNA miRNA MGP_129S1SvImJ_T0004139.1 MGP_129S1SvImJ_G0003661.1 mouse_genomes_project 2 151642068 151642937 - AI646519 antisense antisense MGP_129S1SvImJ_T0059592.1 MGP_129S1SvImJ_G0026964.1 mouse_genomes_project 2 180630363 180683917 + MGP_129S1SvImJ_P0059592 Gnas protein_coding protein_coding MGP_129S1SvImJ_T0059593.1 MGP_129S1SvImJ_G0026964.1 mouse_genomes_project 2 180630363 180692542 + MGP_129S1SvImJ_P0059593 Gnas protein_coding protein_coding MGP_129S1SvImJ_T0059594.1 MGP_129S1SvImJ_G0026964.1 mouse_genomes_project 2 180630363 180642785 + MGP_129S1SvImJ_P0059594 Gnas protein_coding protein_coding MGP_129S1SvImJ_T0059595.1 MGP_129S1SvImJ_G0026964.1 mouse_genomes_project 2 180631401 180683917 + MGP_129S1SvImJ_P0059595 Gnas protein_coding protein_coding MGP_129S1SvImJ_T0059596.1 MGP_129S1SvImJ_G0026964.1 mouse_genomes_project 2 180643749 180692300 + Gnas protein_coding processed_transcript MGP_129S1SvImJ_T0059597.1 MGP_129S1SvImJ_G0026964.1 mouse_genomes_project 2 180643749 180692300 + MGP_129S1SvImJ_P0059597 Gnas protein_coding protein_coding MGP_129S1SvImJ_T0059598.1 MGP_129S1SvImJ_G0026964.1 mouse_genomes_project 2 180643749 180647909 + MGP_129S1SvImJ_P0059598 Gnas protein_coding protein_coding MGP_129S1SvImJ_T0059599.1 MGP_129S1SvImJ_G0026964.1 mouse_genomes_project 2 180643749 180692510 + MGP_129S1SvImJ_P0059599 Gnas protein_coding protein_coding MGP_129S1SvImJ_T0059600.1 MGP_129S1SvImJ_G0026964.1 mouse_genomes_project 2 180643749 180692542 + MGP_129S1SvImJ_P0059600 Gnas protein_coding protein_coding MGP_129S1SvImJ_T0059601.1 MGP_129S1SvImJ_G0026964.1 mouse_genomes_project 2 180673413 180691038 + Gnas protein_coding processed_transcript MGP_129S1SvImJ_T0059602.1 MGP_129S1SvImJ_G0026964.1 mouse_genomes_project 2 180673542 180692300 + Gnas protein_coding processed_transcript MGP_129S1SvImJ_T0059603.1 MGP_129S1SvImJ_G0026964.1 mouse_genomes_project 2 180673573 180674792 + Gnas protein_coding processed_transcript MGP_129S1SvImJ_T0059604.1 MGP_129S1SvImJ_G0026964.1 mouse_genomes_project 2 180673600 180683917 + Gnas protein_coding processed_transcript MGP_129S1SvImJ_T0059605.1 MGP_129S1SvImJ_G0026964.1 mouse_genomes_project 2 180673866 180691076 + Gnas protein_coding processed_transcript MGP_129S1SvImJ_T0059606.1 MGP_129S1SvImJ_G0026964.1 mouse_genomes_project 2 180675852 180692542 + MGP_129S1SvImJ_P0059606 Gnas protein_coding protein_coding MGP_129S1SvImJ_T0059607.1 MGP_129S1SvImJ_G0026964.1 mouse_genomes_project 2 180675906 180692542 + MGP_129S1SvImJ_P0059607 Gnas protein_coding protein_coding MGP_129S1SvImJ_T0059608.1 MGP_129S1SvImJ_G0026964.1 mouse_genomes_project 2 180676096 180683917 + MGP_129S1SvImJ_P0059608 Gnas protein_coding protein_coding MGP_129S1SvImJ_T0059609.1 MGP_129S1SvImJ_G0026964.1 mouse_genomes_project 2 180676105 180692546 + MGP_129S1SvImJ_P0059609 Gnas protein_coding protein_coding MGP_129S1SvImJ_T0059611.1 MGP_129S1SvImJ_G0026964.1 mouse_genomes_project 2 180687498 180691206 + Gnas protein_coding retained_intron MGP_129S1SvImJ_T0059612.1 MGP_129S1SvImJ_G0026964.1 mouse_genomes_project 2 180690446 180691525 + Gnas protein_coding retained_intron MGP_129S1SvImJ_T0100942.1 MGP_129S1SvImJ_G0039009.1 mouse_genomes_project 2 57164827 57164978 - Gm25388 snoRNA snoRNA MGP_129S1SvImJ_T0017783.1 MGP_129S1SvImJ_G0015404.1 mouse_genomes_project 2 25533570 25536507 + Gm13421 processed_transcript processed_transcript MGP_129S1SvImJ_T0017784.1 MGP_129S1SvImJ_G0015404.1 mouse_genomes_project 2 25533573 25536330 + Gm13421 processed_transcript processed_transcript MGP_129S1SvImJ_T0053933.1 MGP_129S1SvImJ_G0025581.1 mouse_genomes_project 2 29326726 29451990 - MGP_129S1SvImJ_P0053933 Fnbp1 protein_coding protein_coding MGP_129S1SvImJ_T0053934.1 MGP_129S1SvImJ_G0025581.1 mouse_genomes_project 2 29326727 29398866 - MGP_129S1SvImJ_P0053934 Fnbp1 protein_coding protein_coding MGP_129S1SvImJ_T0053935.1 MGP_129S1SvImJ_G0025581.1 mouse_genomes_project 2 29326727 29452196 - MGP_129S1SvImJ_P0053935 Fnbp1 protein_coding protein_coding MGP_129S1SvImJ_T0053936.1 MGP_129S1SvImJ_G0025581.1 mouse_genomes_project 2 29326728 29452184 - MGP_129S1SvImJ_P0053936 Fnbp1 protein_coding protein_coding MGP_129S1SvImJ_T0053937.1 MGP_129S1SvImJ_G0025581.1 mouse_genomes_project 2 29327315 29452145 - MGP_129S1SvImJ_P0053937 Fnbp1 protein_coding protein_coding MGP_129S1SvImJ_T0053938.1 MGP_129S1SvImJ_G0025581.1 mouse_genomes_project 2 29328715 29398866 - Fnbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0053939.1 MGP_129S1SvImJ_G0025581.1 mouse_genomes_project 2 29333212 29411029 - MGP_129S1SvImJ_P0053939 Fnbp1 protein_coding protein_coding MGP_129S1SvImJ_T0053940.1 MGP_129S1SvImJ_G0025581.1 mouse_genomes_project 2 29333517 29451990 - MGP_129S1SvImJ_P0053940 Fnbp1 protein_coding protein_coding MGP_129S1SvImJ_T0053941.1 MGP_129S1SvImJ_G0025581.1 mouse_genomes_project 2 29333528 29451990 - MGP_129S1SvImJ_P0053941 Fnbp1 protein_coding protein_coding MGP_129S1SvImJ_T0053942.1 MGP_129S1SvImJ_G0025581.1 mouse_genomes_project 2 29333528 29451990 - MGP_129S1SvImJ_P0053942 Fnbp1 protein_coding protein_coding MGP_129S1SvImJ_T0053943.1 MGP_129S1SvImJ_G0025581.1 mouse_genomes_project 2 29333528 29451990 - MGP_129S1SvImJ_P0053943 Fnbp1 protein_coding protein_coding MGP_129S1SvImJ_T0053944.1 MGP_129S1SvImJ_G0025581.1 mouse_genomes_project 2 29333609 29356138 - MGP_129S1SvImJ_P0053944 Fnbp1 protein_coding protein_coding MGP_129S1SvImJ_T0053945.1 MGP_129S1SvImJ_G0025581.1 mouse_genomes_project 2 29353678 29452127 - MGP_129S1SvImJ_P0053945 Fnbp1 protein_coding protein_coding MGP_129S1SvImJ_T0053946.1 MGP_129S1SvImJ_G0025581.1 mouse_genomes_project 2 29356260 29452143 - MGP_129S1SvImJ_P0053946 Fnbp1 protein_coding protein_coding MGP_129S1SvImJ_T0053947.1 MGP_129S1SvImJ_G0025581.1 mouse_genomes_project 2 29359637 29423162 - MGP_129S1SvImJ_P0053947 Fnbp1 protein_coding protein_coding MGP_129S1SvImJ_T0053948.1 MGP_129S1SvImJ_G0025581.1 mouse_genomes_project 2 29398456 29411127 - Fnbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0052558.1 MGP_129S1SvImJ_G0025347.1 mouse_genomes_project 2 9125851 9157985 + MGP_129S1SvImJ_P0052558 Il15ra protein_coding protein_coding MGP_129S1SvImJ_T0052559.1 MGP_129S1SvImJ_G0025347.1 mouse_genomes_project 2 9125890 9157293 + Il15ra protein_coding processed_transcript MGP_129S1SvImJ_T0052560.1 MGP_129S1SvImJ_G0025347.1 mouse_genomes_project 2 9125910 9157630 + MGP_129S1SvImJ_P0052560 Il15ra protein_coding protein_coding MGP_129S1SvImJ_T0052561.1 MGP_129S1SvImJ_G0025347.1 mouse_genomes_project 2 9125930 9157636 + MGP_129S1SvImJ_P0052561 Il15ra protein_coding protein_coding MGP_129S1SvImJ_T0052562.1 MGP_129S1SvImJ_G0025347.1 mouse_genomes_project 2 9125936 9142228 + Il15ra protein_coding retained_intron MGP_129S1SvImJ_T0052563.1 MGP_129S1SvImJ_G0025347.1 mouse_genomes_project 2 9125948 9157636 + Il15ra protein_coding processed_transcript MGP_129S1SvImJ_T0052564.1 MGP_129S1SvImJ_G0025347.1 mouse_genomes_project 2 9126004 9157650 + MGP_129S1SvImJ_P0052564 Il15ra protein_coding protein_coding MGP_129S1SvImJ_T0052565.1 MGP_129S1SvImJ_G0025347.1 mouse_genomes_project 2 9126113 9157069 + Il15ra protein_coding processed_transcript MGP_129S1SvImJ_T0052566.1 MGP_129S1SvImJ_G0025347.1 mouse_genomes_project 2 9126273 9143767 + MGP_129S1SvImJ_P0052566 Il15ra protein_coding protein_coding MGP_129S1SvImJ_T0052567.1 MGP_129S1SvImJ_G0025347.1 mouse_genomes_project 2 9126320 9144054 + Il15ra protein_coding retained_intron MGP_129S1SvImJ_T0052568.1 MGP_129S1SvImJ_G0025347.1 mouse_genomes_project 2 9126338 9157654 + MGP_129S1SvImJ_P0052568 Il15ra protein_coding protein_coding MGP_129S1SvImJ_T0052569.1 MGP_129S1SvImJ_G0025347.1 mouse_genomes_project 2 9126371 9157069 + MGP_129S1SvImJ_P0052569 Il15ra protein_coding protein_coding MGP_129S1SvImJ_T0052570.1 MGP_129S1SvImJ_G0025347.1 mouse_genomes_project 2 9126371 9157985 + MGP_129S1SvImJ_P0052570 Il15ra protein_coding protein_coding MGP_129S1SvImJ_T0052571.1 MGP_129S1SvImJ_G0025347.1 mouse_genomes_project 2 9126372 9157069 + MGP_129S1SvImJ_P0052571 Il15ra protein_coding protein_coding MGP_129S1SvImJ_T0052572.1 MGP_129S1SvImJ_G0025347.1 mouse_genomes_project 2 9126409 9156917 + MGP_129S1SvImJ_P0052572 Il15ra protein_coding protein_coding MGP_129S1SvImJ_T0052573.1 MGP_129S1SvImJ_G0025347.1 mouse_genomes_project 2 9141988 9143948 + Il15ra protein_coding retained_intron MGP_129S1SvImJ_T0052574.1 MGP_129S1SvImJ_G0025347.1 mouse_genomes_project 2 9142092 9157085 + MGP_129S1SvImJ_P0052574 Il15ra protein_coding protein_coding MGP_129S1SvImJ_T0052575.1 MGP_129S1SvImJ_G0025347.1 mouse_genomes_project 2 9146825 9157636 + Il15ra protein_coding retained_intron MGP_129S1SvImJ_T0013503.1 MGP_129S1SvImJ_G0011592.1 mouse_genomes_project 2 35712779 35713188 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055305.1 MGP_129S1SvImJ_G0025831.1 mouse_genomes_project 2 73165482 73217457 - MGP_129S1SvImJ_P0055305 Sp3 protein_coding protein_coding MGP_129S1SvImJ_T0055306.1 MGP_129S1SvImJ_G0025831.1 mouse_genomes_project 2 73165703 73217437 - MGP_129S1SvImJ_P0055306 Sp3 protein_coding protein_coding MGP_129S1SvImJ_T0055307.1 MGP_129S1SvImJ_G0025831.1 mouse_genomes_project 2 73165707 73215539 - Sp3 protein_coding processed_transcript MGP_129S1SvImJ_T0055308.1 MGP_129S1SvImJ_G0025831.1 mouse_genomes_project 2 73168727 73171532 - Sp3 protein_coding processed_transcript MGP_129S1SvImJ_T0055309.1 MGP_129S1SvImJ_G0025831.1 mouse_genomes_project 2 73177561 73206719 - Sp3 protein_coding processed_transcript MGP_129S1SvImJ_T0007299.1 MGP_129S1SvImJ_G0005988.1 mouse_genomes_project 2 116752441 116753703 - Gm29234 lincRNA lincRNA MGP_129S1SvImJ_T0059562.1 MGP_129S1SvImJ_G0026954.1 mouse_genomes_project 2 179405003 179412615 + MGP_129S1SvImJ_P0059562 Pck1 protein_coding protein_coding MGP_129S1SvImJ_T0059563.1 MGP_129S1SvImJ_G0026954.1 mouse_genomes_project 2 179405028 179406765 + Pck1 protein_coding processed_transcript MGP_129S1SvImJ_T0059564.1 MGP_129S1SvImJ_G0026954.1 mouse_genomes_project 2 179405028 179406415 + Pck1 protein_coding retained_intron MGP_129S1SvImJ_T0059565.1 MGP_129S1SvImJ_G0026954.1 mouse_genomes_project 2 179405037 179412613 + Pck1 protein_coding retained_intron MGP_129S1SvImJ_T0010346.1 MGP_129S1SvImJ_G0008462.1 mouse_genomes_project 2 25709 25816 + Gm27306 miRNA miRNA MGP_129S1SvImJ_T0053893.1 MGP_129S1SvImJ_G0025574.1 mouse_genomes_project 2 29101461 29106617 - Asb6 protein_coding retained_intron MGP_129S1SvImJ_T0053894.1 MGP_129S1SvImJ_G0025574.1 mouse_genomes_project 2 29101461 29108696 - MGP_129S1SvImJ_P0053894 Asb6 protein_coding protein_coding MGP_129S1SvImJ_T0053895.1 MGP_129S1SvImJ_G0025574.1 mouse_genomes_project 2 29102834 29106628 - MGP_129S1SvImJ_P0053895 Asb6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053896.1 MGP_129S1SvImJ_G0025574.1 mouse_genomes_project 2 29103518 29106654 - Asb6 protein_coding retained_intron MGP_129S1SvImJ_T0053897.1 MGP_129S1SvImJ_G0025574.1 mouse_genomes_project 2 29103822 29105857 - Asb6 protein_coding retained_intron MGP_129S1SvImJ_T0053258.1 MGP_129S1SvImJ_G0025474.1 mouse_genomes_project 2 23796118 23850534 + MGP_129S1SvImJ_P0053258 Kcnt1 protein_coding protein_coding MGP_129S1SvImJ_T0053259.1 MGP_129S1SvImJ_G0025474.1 mouse_genomes_project 2 23796179 23822431 + Kcnt1 protein_coding retained_intron MGP_129S1SvImJ_T0053260.1 MGP_129S1SvImJ_G0025474.1 mouse_genomes_project 2 23796238 23849606 + MGP_129S1SvImJ_P0053260 Kcnt1 protein_coding protein_coding MGP_129S1SvImJ_T0053261.1 MGP_129S1SvImJ_G0025474.1 mouse_genomes_project 2 23796352 23849606 + MGP_129S1SvImJ_P0053261 Kcnt1 protein_coding protein_coding MGP_129S1SvImJ_T0053262.1 MGP_129S1SvImJ_G0025474.1 mouse_genomes_project 2 23811272 23851052 + MGP_129S1SvImJ_P0053262 Kcnt1 protein_coding protein_coding MGP_129S1SvImJ_T0053263.1 MGP_129S1SvImJ_G0025474.1 mouse_genomes_project 2 23811346 23828664 + Kcnt1 protein_coding retained_intron MGP_129S1SvImJ_T0053264.1 MGP_129S1SvImJ_G0025474.1 mouse_genomes_project 2 23811352 23850100 + MGP_129S1SvImJ_P0053264 Kcnt1 protein_coding protein_coding MGP_129S1SvImJ_T0053265.1 MGP_129S1SvImJ_G0025474.1 mouse_genomes_project 2 23811359 23850569 + Kcnt1 protein_coding retained_intron MGP_129S1SvImJ_T0053266.1 MGP_129S1SvImJ_G0025474.1 mouse_genomes_project 2 23811362 23851762 + MGP_129S1SvImJ_P0053266 Kcnt1 protein_coding protein_coding MGP_129S1SvImJ_T0053267.1 MGP_129S1SvImJ_G0025474.1 mouse_genomes_project 2 23811370 23849606 + MGP_129S1SvImJ_P0053267 Kcnt1 protein_coding protein_coding MGP_129S1SvImJ_T0053268.1 MGP_129S1SvImJ_G0025474.1 mouse_genomes_project 2 23827831 23850081 + Kcnt1 protein_coding retained_intron MGP_129S1SvImJ_T0053269.1 MGP_129S1SvImJ_G0025474.1 mouse_genomes_project 2 23834379 23836884 + MGP_129S1SvImJ_P0053269 Kcnt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053270.1 MGP_129S1SvImJ_G0025474.1 mouse_genomes_project 2 23836990 23843398 + MGP_129S1SvImJ_P0053270 Kcnt1 protein_coding protein_coding MGP_129S1SvImJ_T0053271.1 MGP_129S1SvImJ_G0025474.1 mouse_genomes_project 2 23841551 23850412 + Kcnt1 protein_coding retained_intron MGP_129S1SvImJ_T0053272.1 MGP_129S1SvImJ_G0025474.1 mouse_genomes_project 2 23844382 23849729 + Kcnt1 protein_coding retained_intron MGP_129S1SvImJ_T0055391.1 MGP_129S1SvImJ_G0025851.1 mouse_genomes_project 2 75025752 75064700 + MGP_129S1SvImJ_P0055391 Hoxd3 protein_coding protein_coding MGP_129S1SvImJ_T0055396.1 MGP_129S1SvImJ_G0025851.1 mouse_genomes_project 2 75047971 75060644 + MGP_129S1SvImJ_P0055396 Hoxd3 protein_coding protein_coding MGP_129S1SvImJ_T0055397.1 MGP_129S1SvImJ_G0025851.1 mouse_genomes_project 2 75052954 75064344 + MGP_129S1SvImJ_P0055397 Hoxd3 protein_coding protein_coding MGP_129S1SvImJ_T0055398.1 MGP_129S1SvImJ_G0025851.1 mouse_genomes_project 2 75056057 75064329 + MGP_129S1SvImJ_P0055398 Hoxd3 protein_coding protein_coding MGP_129S1SvImJ_T0055399.1 MGP_129S1SvImJ_G0025851.1 mouse_genomes_project 2 75062102 75063025 + MGP_129S1SvImJ_P0055399 Hoxd3 protein_coding protein_coding MGP_129S1SvImJ_T0055400.1 MGP_129S1SvImJ_G0025851.1 mouse_genomes_project 2 75062150 75064871 + Hoxd3 protein_coding retained_intron MGP_129S1SvImJ_T0055838.1 MGP_129S1SvImJ_G0026034.1 mouse_genomes_project 2 88991330 88992275 - MGP_129S1SvImJ_P0055838 Olfr1155 protein_coding protein_coding MGP_129S1SvImJ_T0013645.1 MGP_129S1SvImJ_G0011734.1 mouse_genomes_project 2 84398773 84400026 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013748.1 MGP_129S1SvImJ_G0011837.1 mouse_genomes_project 2 121922094 121923426 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013567.1 MGP_129S1SvImJ_G0011656.1 mouse_genomes_project 2 58518946 58520675 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058841.1 MGP_129S1SvImJ_G0026777.1 mouse_genomes_project 2 162128017 162186905 - MGP_129S1SvImJ_P0058841 Rbl1 protein_coding protein_coding MGP_129S1SvImJ_T0058842.1 MGP_129S1SvImJ_G0026777.1 mouse_genomes_project 2 162149391 162186927 - Rbl1 protein_coding retained_intron MGP_129S1SvImJ_T0058843.1 MGP_129S1SvImJ_G0026777.1 mouse_genomes_project 2 162158365 162186919 - Rbl1 protein_coding retained_intron MGP_129S1SvImJ_T0058844.1 MGP_129S1SvImJ_G0026777.1 mouse_genomes_project 2 162170795 162174914 - Rbl1 protein_coding retained_intron MGP_129S1SvImJ_T0057563.1 MGP_129S1SvImJ_G0026476.1 mouse_genomes_project 2 132182153 132220156 + MGP_129S1SvImJ_P0057563 Tmem87b protein_coding protein_coding MGP_129S1SvImJ_T0057564.1 MGP_129S1SvImJ_G0026476.1 mouse_genomes_project 2 132182374 132217238 + MGP_129S1SvImJ_P0057564 Tmem87b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0057565.1 MGP_129S1SvImJ_G0026476.1 mouse_genomes_project 2 132182419 132217687 + MGP_129S1SvImJ_P0057565 Tmem87b protein_coding protein_coding MGP_129S1SvImJ_T0057566.1 MGP_129S1SvImJ_G0026476.1 mouse_genomes_project 2 132195730 132216211 + Tmem87b protein_coding processed_transcript MGP_129S1SvImJ_T0057567.1 MGP_129S1SvImJ_G0026476.1 mouse_genomes_project 2 132205261 132215620 + Tmem87b protein_coding retained_intron MGP_129S1SvImJ_T0057568.1 MGP_129S1SvImJ_G0026476.1 mouse_genomes_project 2 132215854 132217306 + Tmem87b protein_coding processed_transcript MGP_129S1SvImJ_T0059122.1 MGP_129S1SvImJ_G0026849.1 mouse_genomes_project 2 169822561 169839743 - MGP_129S1SvImJ_P0059122 Matn4 protein_coding protein_coding MGP_129S1SvImJ_T0059123.1 MGP_129S1SvImJ_G0026849.1 mouse_genomes_project 2 169822561 169839745 - MGP_129S1SvImJ_P0059123 Matn4 protein_coding protein_coding MGP_129S1SvImJ_T0059124.1 MGP_129S1SvImJ_G0026849.1 mouse_genomes_project 2 169822561 169840291 - MGP_129S1SvImJ_P0059124 Matn4 protein_coding protein_coding MGP_129S1SvImJ_T0059125.1 MGP_129S1SvImJ_G0026849.1 mouse_genomes_project 2 169822561 169839743 - MGP_129S1SvImJ_P0059125 Matn4 protein_coding protein_coding MGP_129S1SvImJ_T0059126.1 MGP_129S1SvImJ_G0026849.1 mouse_genomes_project 2 169827040 169839744 - Matn4 protein_coding retained_intron MGP_129S1SvImJ_T0013857.1 MGP_129S1SvImJ_G0011946.1 mouse_genomes_project 2 161842256 161842493 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007185.1 MGP_129S1SvImJ_G0005894.1 mouse_genomes_project 2 32528587 32530666 + Gm13404 lincRNA lincRNA MGP_129S1SvImJ_T0007377.1 MGP_129S1SvImJ_G0006052.1 mouse_genomes_project 2 161770860 161777683 - Gm14230 lincRNA lincRNA MGP_129S1SvImJ_T0007378.1 MGP_129S1SvImJ_G0006052.1 mouse_genomes_project 2 161775684 161777755 - Gm14230 lincRNA lincRNA MGP_129S1SvImJ_T0007379.1 MGP_129S1SvImJ_G0006052.1 mouse_genomes_project 2 161776334 161777663 - Gm14230 lincRNA lincRNA MGP_129S1SvImJ_T0058805.1 MGP_129S1SvImJ_G0026770.1 mouse_genomes_project 2 161808767 161820352 + MGP_129S1SvImJ_P0058805 1110008F13Rik protein_coding protein_coding MGP_129S1SvImJ_T0058806.1 MGP_129S1SvImJ_G0026770.1 mouse_genomes_project 2 161808778 161820187 + 1110008F13Rik protein_coding processed_transcript MGP_129S1SvImJ_T0058807.1 MGP_129S1SvImJ_G0026770.1 mouse_genomes_project 2 161808784 161812627 + 1110008F13Rik protein_coding retained_intron MGP_129S1SvImJ_T0058809.1 MGP_129S1SvImJ_G0026770.1 mouse_genomes_project 2 161819330 161820185 + 1110008F13Rik protein_coding processed_transcript MGP_129S1SvImJ_T0055894.1 MGP_129S1SvImJ_G0026085.1 mouse_genomes_project 2 90339806 90340742 - MGP_129S1SvImJ_P0055894 Olfr1224-ps1 protein_coding protein_coding MGP_129S1SvImJ_T0017834.1 MGP_129S1SvImJ_G0015441.1 mouse_genomes_project 2 92195605 92204748 - Ptpmt1 processed_transcript processed_transcript MGP_129S1SvImJ_T0017835.1 MGP_129S1SvImJ_G0015441.1 mouse_genomes_project 2 92197602 92205149 - Ptpmt1 processed_transcript processed_transcript MGP_129S1SvImJ_T0017836.1 MGP_129S1SvImJ_G0015441.1 mouse_genomes_project 2 92197602 92204941 - Ptpmt1 processed_transcript processed_transcript MGP_129S1SvImJ_T0017837.1 MGP_129S1SvImJ_G0015441.1 mouse_genomes_project 2 92197883 92204486 - Ptpmt1 processed_transcript processed_transcript MGP_129S1SvImJ_T0017838.1 MGP_129S1SvImJ_G0015441.1 mouse_genomes_project 2 92200927 92204559 - Ptpmt1 processed_transcript processed_transcript MGP_129S1SvImJ_T0053215.1 MGP_129S1SvImJ_G0025457.1 mouse_genomes_project 2 23478223 23484536 - MGP_129S1SvImJ_P0053215 Gm996 protein_coding protein_coding MGP_129S1SvImJ_T0053216.1 MGP_129S1SvImJ_G0025457.1 mouse_genomes_project 2 23478237 23484565 - MGP_129S1SvImJ_P0053216 Gm996 protein_coding protein_coding MGP_129S1SvImJ_T0053217.1 MGP_129S1SvImJ_G0025457.1 mouse_genomes_project 2 23479780 23482705 - MGP_129S1SvImJ_P0053217 Gm996 protein_coding protein_coding MGP_129S1SvImJ_T0053218.1 MGP_129S1SvImJ_G0025457.1 mouse_genomes_project 2 23482618 23483071 - MGP_129S1SvImJ_P0053218 Gm996 protein_coding protein_coding MGP_129S1SvImJ_T0098863.1 MGP_129S1SvImJ_G0036942.1 mouse_genomes_project 2 149449204 149493343 + Gm14093 sense_intronic sense_intronic MGP_129S1SvImJ_T0056356.1 MGP_129S1SvImJ_G0026189.1 mouse_genomes_project 2 103494555 103503214 + MGP_129S1SvImJ_P0056356 Rag2 protein_coding protein_coding MGP_129S1SvImJ_T0056357.1 MGP_129S1SvImJ_G0026189.1 mouse_genomes_project 2 103494583 103501738 + MGP_129S1SvImJ_P0056357 Rag2 protein_coding protein_coding MGP_129S1SvImJ_T0053462.1 MGP_129S1SvImJ_G0025506.1 mouse_genomes_project 2 24980487 24987411 + MGP_129S1SvImJ_P0053462 Cacfd1 protein_coding protein_coding MGP_129S1SvImJ_T0053463.1 MGP_129S1SvImJ_G0025506.1 mouse_genomes_project 2 24980487 24987986 + MGP_129S1SvImJ_P0053463 Cacfd1 protein_coding protein_coding MGP_129S1SvImJ_T0053464.1 MGP_129S1SvImJ_G0025506.1 mouse_genomes_project 2 24980487 24991937 + MGP_129S1SvImJ_P0053464 Cacfd1 protein_coding protein_coding MGP_129S1SvImJ_T0053465.1 MGP_129S1SvImJ_G0025506.1 mouse_genomes_project 2 24980487 24991937 + MGP_129S1SvImJ_P0053465 Cacfd1 protein_coding protein_coding MGP_129S1SvImJ_T0053466.1 MGP_129S1SvImJ_G0025506.1 mouse_genomes_project 2 24980574 24988983 + Cacfd1 protein_coding processed_transcript MGP_129S1SvImJ_T0053467.1 MGP_129S1SvImJ_G0025506.1 mouse_genomes_project 2 24980643 24986465 + MGP_129S1SvImJ_P0053467 Cacfd1 protein_coding protein_coding MGP_129S1SvImJ_T0053468.1 MGP_129S1SvImJ_G0025506.1 mouse_genomes_project 2 24981154 24991146 + MGP_129S1SvImJ_P0053468 Cacfd1 protein_coding protein_coding MGP_129S1SvImJ_T0053469.1 MGP_129S1SvImJ_G0025506.1 mouse_genomes_project 2 24986144 24987997 + Cacfd1 protein_coding retained_intron MGP_129S1SvImJ_T0055424.1 MGP_129S1SvImJ_G0025864.1 mouse_genomes_project 2 76767105 76780953 + MGP_129S1SvImJ_P0055424 Rbm45 protein_coding protein_coding MGP_129S1SvImJ_T0057621.1 MGP_129S1SvImJ_G0026493.1 mouse_genomes_project 2 133429055 133471557 + MGP_129S1SvImJ_P0057621 Tgm3 protein_coding protein_coding MGP_129S1SvImJ_T0055410.1 MGP_129S1SvImJ_G0025858.1 mouse_genomes_project 2 76188449 76189556 + MGP_129S1SvImJ_P0055410 protein_coding protein_coding MGP_129S1SvImJ_T0013746.1 MGP_129S1SvImJ_G0011835.1 mouse_genomes_project 2 121734152 121734421 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059569.1 MGP_129S1SvImJ_G0026956.1 mouse_genomes_project 2 179484475 179545934 - MGP_129S1SvImJ_P0059569 Pmepa1 protein_coding protein_coding MGP_129S1SvImJ_T0059570.1 MGP_129S1SvImJ_G0026956.1 mouse_genomes_project 2 179488069 179542677 - MGP_129S1SvImJ_P0059570 Pmepa1 protein_coding protein_coding MGP_129S1SvImJ_T0059571.1 MGP_129S1SvImJ_G0026956.1 mouse_genomes_project 2 179488234 179496474 - Pmepa1 protein_coding retained_intron MGP_129S1SvImJ_T0001053.1 MGP_129S1SvImJ_G0000982.1 mouse_genomes_project 2 8753855 8756066 - TEC TEC MGP_129S1SvImJ_T0004174.1 MGP_129S1SvImJ_G0003690.1 mouse_genomes_project 2 169045513 169053603 - Gm16316 antisense antisense MGP_129S1SvImJ_T0054702.1 MGP_129S1SvImJ_G0025721.1 mouse_genomes_project 2 48092547 48419487 + MGP_129S1SvImJ_P0054702 Mbd5 protein_coding protein_coding MGP_129S1SvImJ_T0054703.1 MGP_129S1SvImJ_G0025721.1 mouse_genomes_project 2 48092557 48260872 + Mbd5 protein_coding processed_transcript MGP_129S1SvImJ_T0054704.1 MGP_129S1SvImJ_G0025721.1 mouse_genomes_project 2 48092562 48479284 + MGP_129S1SvImJ_P0054704 Mbd5 protein_coding protein_coding MGP_129S1SvImJ_T0054705.1 MGP_129S1SvImJ_G0025721.1 mouse_genomes_project 2 48093001 48165562 + Mbd5 protein_coding processed_transcript MGP_129S1SvImJ_T0054706.1 MGP_129S1SvImJ_G0025721.1 mouse_genomes_project 2 48093002 48097056 + Mbd5 protein_coding processed_transcript MGP_129S1SvImJ_T0054707.1 MGP_129S1SvImJ_G0025721.1 mouse_genomes_project 2 48093110 48260736 + Mbd5 protein_coding processed_transcript MGP_129S1SvImJ_T0054708.1 MGP_129S1SvImJ_G0025721.1 mouse_genomes_project 2 48093188 48404447 + Mbd5 protein_coding processed_transcript MGP_129S1SvImJ_T0054709.1 MGP_129S1SvImJ_G0025721.1 mouse_genomes_project 2 48093194 48207926 + Mbd5 protein_coding processed_transcript MGP_129S1SvImJ_T0054710.1 MGP_129S1SvImJ_G0025721.1 mouse_genomes_project 2 48404858 48481990 + MGP_129S1SvImJ_P0054710 Mbd5 protein_coding protein_coding MGP_129S1SvImJ_T0054711.1 MGP_129S1SvImJ_G0025721.1 mouse_genomes_project 2 48405059 48431779 + MGP_129S1SvImJ_P0054711 Mbd5 protein_coding protein_coding MGP_129S1SvImJ_T0054712.1 MGP_129S1SvImJ_G0025721.1 mouse_genomes_project 2 48415489 48479310 + MGP_129S1SvImJ_P0054712 Mbd5 protein_coding protein_coding MGP_129S1SvImJ_T0054713.1 MGP_129S1SvImJ_G0025721.1 mouse_genomes_project 2 48431883 48487703 + MGP_129S1SvImJ_P0054713 Mbd5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054714.1 MGP_129S1SvImJ_G0025721.1 mouse_genomes_project 2 48439166 48478964 + MGP_129S1SvImJ_P0054714 Mbd5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054715.1 MGP_129S1SvImJ_G0025721.1 mouse_genomes_project 2 48439167 48478975 + MGP_129S1SvImJ_P0054715 Mbd5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054716.1 MGP_129S1SvImJ_G0025721.1 mouse_genomes_project 2 48439315 48479198 + MGP_129S1SvImJ_P0054716 Mbd5 protein_coding protein_coding MGP_129S1SvImJ_T0055733.1 MGP_129S1SvImJ_G0025942.1 mouse_genomes_project 2 86653678 86654626 + MGP_129S1SvImJ_P0055733 Olfr1022 protein_coding protein_coding MGP_129S1SvImJ_T0057990.1 MGP_129S1SvImJ_G0026573.1 mouse_genomes_project 2 146613378 146906608 - MGP_129S1SvImJ_P0057990 Kif16b protein_coding protein_coding MGP_129S1SvImJ_T0057991.1 MGP_129S1SvImJ_G0026573.1 mouse_genomes_project 2 146614615 146645670 - Kif16b protein_coding retained_intron MGP_129S1SvImJ_T0057992.1 MGP_129S1SvImJ_G0026573.1 mouse_genomes_project 2 146615662 146906448 - MGP_129S1SvImJ_P0057992 Kif16b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0058320.1 MGP_129S1SvImJ_G0026672.1 mouse_genomes_project 2 157184710 157185424 - MGP_129S1SvImJ_P0058320 Defb25 protein_coding protein_coding MGP_129S1SvImJ_T0007382.1 MGP_129S1SvImJ_G0006055.1 mouse_genomes_project 2 165060637 165100872 - Gm14223 lincRNA lincRNA MGP_129S1SvImJ_T0052429.1 MGP_129S1SvImJ_G0025326.1 mouse_genomes_project 2 3004578 3028793 - MGP_129S1SvImJ_P0052429 Sec61a2 protein_coding protein_coding MGP_129S1SvImJ_T0052430.1 MGP_129S1SvImJ_G0025326.1 mouse_genomes_project 2 3004620 3028695 - MGP_129S1SvImJ_P0052430 Sec61a2 protein_coding protein_coding MGP_129S1SvImJ_T0052431.1 MGP_129S1SvImJ_G0025326.1 mouse_genomes_project 2 3005186 3010060 - MGP_129S1SvImJ_P0052431 Sec61a2 protein_coding protein_coding MGP_129S1SvImJ_T0052432.1 MGP_129S1SvImJ_G0025326.1 mouse_genomes_project 2 3005584 3008388 - Sec61a2 protein_coding processed_transcript MGP_129S1SvImJ_T0052433.1 MGP_129S1SvImJ_G0025326.1 mouse_genomes_project 2 3007002 3007882 - Sec61a2 protein_coding processed_transcript MGP_129S1SvImJ_T0052434.1 MGP_129S1SvImJ_G0025326.1 mouse_genomes_project 2 3007389 3010624 - Sec61a2 protein_coding processed_transcript MGP_129S1SvImJ_T0052435.1 MGP_129S1SvImJ_G0025326.1 mouse_genomes_project 2 3010005 3011591 - Sec61a2 protein_coding processed_transcript MGP_129S1SvImJ_T0052436.1 MGP_129S1SvImJ_G0025326.1 mouse_genomes_project 2 3010073 3011972 - Sec61a2 protein_coding processed_transcript MGP_129S1SvImJ_T0052437.1 MGP_129S1SvImJ_G0025326.1 mouse_genomes_project 2 3011455 3028680 - MGP_129S1SvImJ_P0052437 Sec61a2 protein_coding protein_coding MGP_129S1SvImJ_T0052438.1 MGP_129S1SvImJ_G0025326.1 mouse_genomes_project 2 3015396 3028695 - Sec61a2 protein_coding retained_intron MGP_129S1SvImJ_T0055081.1 MGP_129S1SvImJ_G0025787.1 mouse_genomes_project 2 67307830 67308184 - MGP_129S1SvImJ_P0055081 Gm26727 protein_coding protein_coding MGP_129S1SvImJ_T0007416.1 MGP_129S1SvImJ_G0006085.1 mouse_genomes_project 2 174932723 174933531 - Gm14260 lincRNA lincRNA MGP_129S1SvImJ_T0057754.1 MGP_129S1SvImJ_G0026520.1 mouse_genomes_project 2 134572529 134594585 - MGP_129S1SvImJ_P0057754 Siglec1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0057755.1 MGP_129S1SvImJ_G0026520.1 mouse_genomes_project 2 134576729 134594886 - MGP_129S1SvImJ_P0057755 Siglec1 protein_coding protein_coding MGP_129S1SvImJ_T0057756.1 MGP_129S1SvImJ_G0026520.1 mouse_genomes_project 2 134591693 134594886 - MGP_129S1SvImJ_P0057756 Siglec1 protein_coding protein_coding MGP_129S1SvImJ_T0055401.1 MGP_129S1SvImJ_G0025854.1 mouse_genomes_project 2 75080438 75082593 + MGP_129S1SvImJ_P0055401 Hoxd1 protein_coding protein_coding MGP_129S1SvImJ_T0017902.1 MGP_129S1SvImJ_G0015469.1 mouse_genomes_project 2 132585151 132605675 - 9830144P21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017903.1 MGP_129S1SvImJ_G0015469.1 mouse_genomes_project 2 132603420 132609777 - 9830144P21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0004050.1 MGP_129S1SvImJ_G0003601.1 mouse_genomes_project 2 85907598 85909384 + Gm13716 antisense antisense MGP_129S1SvImJ_T0099695.1 MGP_129S1SvImJ_G0037762.1 mouse_genomes_project 2 129306747 129306854 - Gm26496 snRNA snRNA MGP_129S1SvImJ_T0056409.1 MGP_129S1SvImJ_G0026201.1 mouse_genomes_project 2 105027934 105046888 + MGP_129S1SvImJ_P0056409 Apip protein_coding protein_coding MGP_129S1SvImJ_T0056410.1 MGP_129S1SvImJ_G0026201.1 mouse_genomes_project 2 105027954 105046875 + Apip protein_coding processed_transcript MGP_129S1SvImJ_T0056411.1 MGP_129S1SvImJ_G0026201.1 mouse_genomes_project 2 105037202 105046034 + Apip protein_coding processed_transcript MGP_129S1SvImJ_T0056412.1 MGP_129S1SvImJ_G0026201.1 mouse_genomes_project 2 105046079 105046882 + Apip protein_coding processed_transcript MGP_129S1SvImJ_T0007208.1 MGP_129S1SvImJ_G0005913.1 mouse_genomes_project 2 50631152 50633390 - Gm13499 lincRNA lincRNA MGP_129S1SvImJ_T0100923.1 MGP_129S1SvImJ_G0038990.1 mouse_genomes_project 2 24883860 24883934 + Gm22879 snoRNA snoRNA MGP_129S1SvImJ_T0057347.1 MGP_129S1SvImJ_G0026424.1 mouse_genomes_project 2 128248503 128252870 - Myef2 protein_coding processed_transcript MGP_129S1SvImJ_T0057348.1 MGP_129S1SvImJ_G0026424.1 mouse_genomes_project 2 128250145 128287952 - MGP_129S1SvImJ_P0057348 Myef2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057349.1 MGP_129S1SvImJ_G0026424.1 mouse_genomes_project 2 128250442 128287983 - MGP_129S1SvImJ_P0057349 Myef2 protein_coding protein_coding MGP_129S1SvImJ_T0057350.1 MGP_129S1SvImJ_G0026424.1 mouse_genomes_project 2 128251615 128287980 - MGP_129S1SvImJ_P0057350 Myef2 protein_coding protein_coding MGP_129S1SvImJ_T0057351.1 MGP_129S1SvImJ_G0026424.1 mouse_genomes_project 2 128251616 128288017 - MGP_129S1SvImJ_P0057351 Myef2 protein_coding protein_coding MGP_129S1SvImJ_T0057352.1 MGP_129S1SvImJ_G0026424.1 mouse_genomes_project 2 128251616 128288018 - MGP_129S1SvImJ_P0057352 Myef2 protein_coding protein_coding MGP_129S1SvImJ_T0057353.1 MGP_129S1SvImJ_G0026424.1 mouse_genomes_project 2 128252692 128281228 - MGP_129S1SvImJ_P0057353 Myef2 protein_coding protein_coding MGP_129S1SvImJ_T0057354.1 MGP_129S1SvImJ_G0026424.1 mouse_genomes_project 2 128259196 128287771 - MGP_129S1SvImJ_P0057354 Myef2 protein_coding protein_coding MGP_129S1SvImJ_T0057355.1 MGP_129S1SvImJ_G0026424.1 mouse_genomes_project 2 128263115 128287932 - Myef2 protein_coding retained_intron MGP_129S1SvImJ_T0055677.1 MGP_129S1SvImJ_G0025915.1 mouse_genomes_project 2 85573154 85589066 - MGP_129S1SvImJ_P0055677 Rtn4rl2 protein_coding protein_coding MGP_129S1SvImJ_T0055678.1 MGP_129S1SvImJ_G0025915.1 mouse_genomes_project 2 85573176 85589048 - MGP_129S1SvImJ_P0055678 Rtn4rl2 protein_coding protein_coding MGP_129S1SvImJ_T0055679.1 MGP_129S1SvImJ_G0025915.1 mouse_genomes_project 2 85581751 85588832 - Rtn4rl2 protein_coding processed_transcript MGP_129S1SvImJ_T0055889.1 MGP_129S1SvImJ_G0026081.1 mouse_genomes_project 2 90281632 90282568 - MGP_129S1SvImJ_P0055889 Olfr1220 protein_coding protein_coding MGP_129S1SvImJ_T0056891.1 MGP_129S1SvImJ_G0026340.1 mouse_genomes_project 2 122035279 122042136 + Vps18 protein_coding retained_intron MGP_129S1SvImJ_T0056892.1 MGP_129S1SvImJ_G0026340.1 mouse_genomes_project 2 122035281 122047200 + MGP_129S1SvImJ_P0056892 Vps18 protein_coding protein_coding MGP_129S1SvImJ_T0056893.1 MGP_129S1SvImJ_G0026340.1 mouse_genomes_project 2 122035326 122047073 + Vps18 protein_coding processed_transcript MGP_129S1SvImJ_T0055866.1 MGP_129S1SvImJ_G0026060.1 mouse_genomes_project 2 89719156 89720077 + MGP_129S1SvImJ_P0055866 Olfr1189 protein_coding protein_coding MGP_129S1SvImJ_T0001070.1 MGP_129S1SvImJ_G0000999.1 mouse_genomes_project 2 12131931 12134552 + TEC TEC MGP_129S1SvImJ_T0003967.1 MGP_129S1SvImJ_G0003542.1 mouse_genomes_project 2 30359650 30360508 - Gm13442 antisense antisense MGP_129S1SvImJ_T0056479.1 MGP_129S1SvImJ_G0026211.1 mouse_genomes_project 2 106090477 106093826 + MGP_129S1SvImJ_P0056479 Gm10912 protein_coding protein_coding MGP_129S1SvImJ_T0055283.1 MGP_129S1SvImJ_G0025828.1 mouse_genomes_project 2 72150944 72440244 + MGP_129S1SvImJ_P0055283 Rapgef4 protein_coding protein_coding MGP_129S1SvImJ_T0055284.1 MGP_129S1SvImJ_G0025828.1 mouse_genomes_project 2 72150951 72203300 + Rapgef4 protein_coding processed_transcript MGP_129S1SvImJ_T0055285.1 MGP_129S1SvImJ_G0025828.1 mouse_genomes_project 2 72150963 72316860 + Rapgef4 protein_coding processed_transcript MGP_129S1SvImJ_T0055286.1 MGP_129S1SvImJ_G0025828.1 mouse_genomes_project 2 72150991 72439146 + MGP_129S1SvImJ_P0055286 Rapgef4 protein_coding protein_coding MGP_129S1SvImJ_T0055287.1 MGP_129S1SvImJ_G0025828.1 mouse_genomes_project 2 72224570 72440242 + MGP_129S1SvImJ_P0055287 Rapgef4 protein_coding protein_coding MGP_129S1SvImJ_T0055288.1 MGP_129S1SvImJ_G0025828.1 mouse_genomes_project 2 72224959 72317036 + Rapgef4 protein_coding processed_transcript MGP_129S1SvImJ_T0055289.1 MGP_129S1SvImJ_G0025828.1 mouse_genomes_project 2 72316270 72375674 + Rapgef4 protein_coding processed_transcript MGP_129S1SvImJ_T0055290.1 MGP_129S1SvImJ_G0025828.1 mouse_genomes_project 2 72316287 72338771 + Rapgef4 protein_coding processed_transcript MGP_129S1SvImJ_T0055291.1 MGP_129S1SvImJ_G0025828.1 mouse_genomes_project 2 72355802 72440242 + Rapgef4 protein_coding processed_transcript MGP_129S1SvImJ_T0055292.1 MGP_129S1SvImJ_G0025828.1 mouse_genomes_project 2 72378211 72387857 + Rapgef4 protein_coding processed_transcript MGP_129S1SvImJ_T0055293.1 MGP_129S1SvImJ_G0025828.1 mouse_genomes_project 2 72423861 72439425 + Rapgef4 protein_coding processed_transcript MGP_129S1SvImJ_T0100935.1 MGP_129S1SvImJ_G0039002.1 mouse_genomes_project 2 41755666 41755799 + Gm24350 snoRNA snoRNA MGP_129S1SvImJ_T0058716.1 MGP_129S1SvImJ_G0026759.1 mouse_genomes_project 2 161006109 161007868 + MGP_129S1SvImJ_P0058716 Romo1 protein_coding protein_coding MGP_129S1SvImJ_T0058717.1 MGP_129S1SvImJ_G0026759.1 mouse_genomes_project 2 161006303 161007865 + MGP_129S1SvImJ_P0058717 Romo1 protein_coding protein_coding MGP_129S1SvImJ_T0058718.1 MGP_129S1SvImJ_G0026759.1 mouse_genomes_project 2 161006307 161007854 + MGP_129S1SvImJ_P0058718 Romo1 protein_coding protein_coding MGP_129S1SvImJ_T0058719.1 MGP_129S1SvImJ_G0026759.1 mouse_genomes_project 2 161006310 161007865 + MGP_129S1SvImJ_P0058719 Romo1 protein_coding protein_coding MGP_129S1SvImJ_T0100975.1 MGP_129S1SvImJ_G0039042.1 mouse_genomes_project 2 148334223 148334361 - Gm26165 snoRNA snoRNA MGP_129S1SvImJ_T0057597.1 MGP_129S1SvImJ_G0026487.1 mouse_genomes_project 2 132680664 132693435 - MGP_129S1SvImJ_P0057597 Il1a protein_coding protein_coding MGP_129S1SvImJ_T0058940.1 MGP_129S1SvImJ_G0026798.1 mouse_genomes_project 2 163712064 163727534 + Actr5 protein_coding retained_intron MGP_129S1SvImJ_T0058941.1 MGP_129S1SvImJ_G0026798.1 mouse_genomes_project 2 163712064 163716334 + Actr5 protein_coding retained_intron MGP_129S1SvImJ_T0058942.1 MGP_129S1SvImJ_G0026798.1 mouse_genomes_project 2 163712064 163727534 + MGP_129S1SvImJ_P0058942 Actr5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058943.1 MGP_129S1SvImJ_G0026798.1 mouse_genomes_project 2 163712064 163727547 + MGP_129S1SvImJ_P0058943 Actr5 protein_coding protein_coding MGP_129S1SvImJ_T0058944.1 MGP_129S1SvImJ_G0026798.1 mouse_genomes_project 2 163718805 163725033 + Actr5 protein_coding processed_transcript MGP_129S1SvImJ_T0004131.1 MGP_129S1SvImJ_G0003654.1 mouse_genomes_project 2 148118840 148128512 - Banf2os antisense antisense MGP_129S1SvImJ_T0004132.1 MGP_129S1SvImJ_G0003654.1 mouse_genomes_project 2 148119270 148128489 - Banf2os antisense antisense MGP_129S1SvImJ_T0003996.1 MGP_129S1SvImJ_G0003565.1 mouse_genomes_project 2 59927316 59963215 + Gm13571 antisense antisense MGP_129S1SvImJ_T0003997.1 MGP_129S1SvImJ_G0003565.1 mouse_genomes_project 2 59944486 59954423 + Gm13571 antisense antisense MGP_129S1SvImJ_T0055823.1 MGP_129S1SvImJ_G0026020.1 mouse_genomes_project 2 88745121 88746054 - MGP_129S1SvImJ_P0055823 Olfr1135 protein_coding protein_coding MGP_129S1SvImJ_T0100988.1 MGP_129S1SvImJ_G0039055.1 mouse_genomes_project 2 162729169 162729303 - Gm25407 snoRNA snoRNA MGP_129S1SvImJ_T0098855.1 MGP_129S1SvImJ_G0036934.1 mouse_genomes_project 2 1346645 1349090 + Gm36988 sense_intronic sense_intronic MGP_129S1SvImJ_T0099667.1 MGP_129S1SvImJ_G0037734.1 mouse_genomes_project 2 33532994 33533098 + Gm24905 snRNA snRNA MGP_129S1SvImJ_T0102404.1 MGP_129S1SvImJ_G0040238.1 mouse_genomes_project 2 86861545 86862485 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0013511.1 MGP_129S1SvImJ_G0011600.1 mouse_genomes_project 2 37730224 37730792 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059368.1 MGP_129S1SvImJ_G0026905.1 mouse_genomes_project 2 172634960 172692721 - MGP_129S1SvImJ_P0059368 Stau1 protein_coding protein_coding MGP_129S1SvImJ_T0059369.1 MGP_129S1SvImJ_G0026905.1 mouse_genomes_project 2 172635557 172643330 - Stau1 protein_coding retained_intron MGP_129S1SvImJ_T0059370.1 MGP_129S1SvImJ_G0026905.1 mouse_genomes_project 2 172635557 172692708 - MGP_129S1SvImJ_P0059370 Stau1 protein_coding protein_coding MGP_129S1SvImJ_T0059371.1 MGP_129S1SvImJ_G0026905.1 mouse_genomes_project 2 172635557 172692546 - MGP_129S1SvImJ_P0059371 Stau1 protein_coding protein_coding MGP_129S1SvImJ_T0059372.1 MGP_129S1SvImJ_G0026905.1 mouse_genomes_project 2 172635683 172692742 - MGP_129S1SvImJ_P0059372 Stau1 protein_coding protein_coding MGP_129S1SvImJ_T0059373.1 MGP_129S1SvImJ_G0026905.1 mouse_genomes_project 2 172636656 172638642 - Stau1 protein_coding retained_intron MGP_129S1SvImJ_T0059374.1 MGP_129S1SvImJ_G0026905.1 mouse_genomes_project 2 172636702 172652591 - MGP_129S1SvImJ_P0059374 Stau1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059375.1 MGP_129S1SvImJ_G0026905.1 mouse_genomes_project 2 172637104 172638367 - Stau1 protein_coding retained_intron MGP_129S1SvImJ_T0059376.1 MGP_129S1SvImJ_G0026905.1 mouse_genomes_project 2 172639714 172648263 - Stau1 protein_coding retained_intron MGP_129S1SvImJ_T0059377.1 MGP_129S1SvImJ_G0026905.1 mouse_genomes_project 2 172640854 172651316 - Stau1 protein_coding retained_intron MGP_129S1SvImJ_T0059378.1 MGP_129S1SvImJ_G0026905.1 mouse_genomes_project 2 172651381 172668577 - Stau1 protein_coding processed_transcript MGP_129S1SvImJ_T0100936.1 MGP_129S1SvImJ_G0039003.1 mouse_genomes_project 2 45448200 45448323 + Gm23072 snoRNA snoRNA MGP_129S1SvImJ_T0059641.1 MGP_129S1SvImJ_G0026976.1 mouse_genomes_project 2 184769903 184838676 - MGP_129S1SvImJ_P0059641 Sycp2 protein_coding protein_coding MGP_129S1SvImJ_T0059642.1 MGP_129S1SvImJ_G0026976.1 mouse_genomes_project 2 184770729 184798990 - Sycp2 protein_coding processed_transcript MGP_129S1SvImJ_T0059643.1 MGP_129S1SvImJ_G0026976.1 mouse_genomes_project 2 184793449 184799330 - Sycp2 protein_coding retained_intron MGP_129S1SvImJ_T0059644.1 MGP_129S1SvImJ_G0026976.1 mouse_genomes_project 2 184822605 184838413 - MGP_129S1SvImJ_P0059644 Sycp2 protein_coding protein_coding MGP_129S1SvImJ_T0004031.1 MGP_129S1SvImJ_G0003589.1 mouse_genomes_project 2 73872513 73878286 + Chrna1os antisense antisense MGP_129S1SvImJ_T0004032.1 MGP_129S1SvImJ_G0003589.1 mouse_genomes_project 2 73872523 73878307 + Chrna1os antisense antisense MGP_129S1SvImJ_T0013850.1 MGP_129S1SvImJ_G0011939.1 mouse_genomes_project 2 161200950 161203414 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057280.1 MGP_129S1SvImJ_G0026408.1 mouse_genomes_project 2 125175295 125194688 + MGP_129S1SvImJ_P0057280 Terb2 protein_coding protein_coding MGP_129S1SvImJ_T0057281.1 MGP_129S1SvImJ_G0026408.1 mouse_genomes_project 2 125175497 125193254 + Terb2 protein_coding processed_transcript MGP_129S1SvImJ_T0099717.1 MGP_129S1SvImJ_G0037784.1 mouse_genomes_project 2 188113244 188113407 + Gm25184 snRNA snRNA MGP_129S1SvImJ_T0010457.1 MGP_129S1SvImJ_G0008573.1 mouse_genomes_project 2 105840898 105840994 + Gm22757 miRNA miRNA MGP_129S1SvImJ_T0056021.1 MGP_129S1SvImJ_G0026139.1 mouse_genomes_project 2 92354751 92360175 + MGP_129S1SvImJ_P0056021 Psmc3 protein_coding protein_coding MGP_129S1SvImJ_T0056022.1 MGP_129S1SvImJ_G0026139.1 mouse_genomes_project 2 92354797 92367105 + MGP_129S1SvImJ_P0056022 Psmc3 protein_coding protein_coding MGP_129S1SvImJ_T0056023.1 MGP_129S1SvImJ_G0026139.1 mouse_genomes_project 2 92354837 92356678 + Psmc3 protein_coding processed_transcript MGP_129S1SvImJ_T0056024.1 MGP_129S1SvImJ_G0026139.1 mouse_genomes_project 2 92354842 92360175 + MGP_129S1SvImJ_P0056024 Psmc3 protein_coding protein_coding MGP_129S1SvImJ_T0056025.1 MGP_129S1SvImJ_G0026139.1 mouse_genomes_project 2 92355020 92358588 + MGP_129S1SvImJ_P0056025 Psmc3 protein_coding protein_coding MGP_129S1SvImJ_T0056026.1 MGP_129S1SvImJ_G0026139.1 mouse_genomes_project 2 92355043 92357739 + MGP_129S1SvImJ_P0056026 Psmc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056027.1 MGP_129S1SvImJ_G0026139.1 mouse_genomes_project 2 92355124 92356461 + Psmc3 protein_coding processed_transcript MGP_129S1SvImJ_T0056028.1 MGP_129S1SvImJ_G0026139.1 mouse_genomes_project 2 92355220 92356296 + Psmc3 protein_coding processed_transcript MGP_129S1SvImJ_T0056029.1 MGP_129S1SvImJ_G0026139.1 mouse_genomes_project 2 92355315 92356671 + Psmc3 protein_coding processed_transcript MGP_129S1SvImJ_T0056030.1 MGP_129S1SvImJ_G0026139.1 mouse_genomes_project 2 92358851 92360177 + Psmc3 protein_coding processed_transcript MGP_129S1SvImJ_T0010489.1 MGP_129S1SvImJ_G0008605.1 mouse_genomes_project 2 163836565 163836691 + Gm26141 miRNA miRNA MGP_129S1SvImJ_T0058275.1 MGP_129S1SvImJ_G0026650.1 mouse_genomes_project 2 156606642 156620892 + MGP_129S1SvImJ_P0058275 Scrt2 protein_coding protein_coding MGP_129S1SvImJ_T0053868.1 MGP_129S1SvImJ_G0025570.1 mouse_genomes_project 2 28703628 28706345 - MGP_129S1SvImJ_P0053868 Ier5l protein_coding protein_coding MGP_129S1SvImJ_T0054587.1 MGP_129S1SvImJ_G0025706.1 mouse_genomes_project 2 37721860 37757854 + MGP_129S1SvImJ_P0054587 Olfml2a protein_coding protein_coding MGP_129S1SvImJ_T0013629.1 MGP_129S1SvImJ_G0011718.1 mouse_genomes_project 2 79903718 79904249 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013448.1 MGP_129S1SvImJ_G0011537.1 mouse_genomes_project 2 13050422 13050852 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007399.1 MGP_129S1SvImJ_G0006072.1 mouse_genomes_project 2 172033955 172052553 - Gm14268 lincRNA lincRNA MGP_129S1SvImJ_T0007400.1 MGP_129S1SvImJ_G0006072.1 mouse_genomes_project 2 172034241 172052583 - Gm14268 lincRNA lincRNA MGP_129S1SvImJ_T0013509.1 MGP_129S1SvImJ_G0011598.1 mouse_genomes_project 2 37244554 37244689 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010374.1 MGP_129S1SvImJ_G0008490.1 mouse_genomes_project 2 7868275 7868370 + Mir669a-2 miRNA miRNA MGP_129S1SvImJ_T0053207.1 MGP_129S1SvImJ_G0025455.1 mouse_genomes_project 2 23463894 23472090 - MGP_129S1SvImJ_P0053207 Mamdc4 protein_coding protein_coding MGP_129S1SvImJ_T0053208.1 MGP_129S1SvImJ_G0025455.1 mouse_genomes_project 2 23463916 23472132 - MGP_129S1SvImJ_P0053208 Mamdc4 protein_coding protein_coding MGP_129S1SvImJ_T0053209.1 MGP_129S1SvImJ_G0025455.1 mouse_genomes_project 2 23464089 23471028 - MGP_129S1SvImJ_P0053209 Mamdc4 protein_coding protein_coding MGP_129S1SvImJ_T0053210.1 MGP_129S1SvImJ_G0025455.1 mouse_genomes_project 2 23469231 23470259 - Mamdc4 protein_coding processed_transcript MGP_129S1SvImJ_T0053211.1 MGP_129S1SvImJ_G0025455.1 mouse_genomes_project 2 23469275 23469889 - Mamdc4 protein_coding processed_transcript MGP_129S1SvImJ_T0053212.1 MGP_129S1SvImJ_G0025455.1 mouse_genomes_project 2 23470947 23475619 - Mamdc4 protein_coding processed_transcript MGP_129S1SvImJ_T0013858.1 MGP_129S1SvImJ_G0011947.1 mouse_genomes_project 2 161961981 161964893 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098710.1 MGP_129S1SvImJ_G0036795.1 mouse_genomes_project 2 134938256 134938558 - Gm22902 ribozyme ribozyme MGP_129S1SvImJ_T0056635.1 MGP_129S1SvImJ_G0026251.1 mouse_genomes_project 2 113559823 113600975 - MGP_129S1SvImJ_P0056635 4930430A15Rik protein_coding protein_coding MGP_129S1SvImJ_T0056636.1 MGP_129S1SvImJ_G0026251.1 mouse_genomes_project 2 113586142 113626828 - MGP_129S1SvImJ_P0056636 4930430A15Rik protein_coding protein_coding MGP_129S1SvImJ_T0055444.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77099784 77387082 - MGP_129S1SvImJ_P0055444 Ttn protein_coding protein_coding MGP_129S1SvImJ_T0055445.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77099784 77387082 - MGP_129S1SvImJ_P0055445 Ttn protein_coding protein_coding MGP_129S1SvImJ_T0055446.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77099788 77387174 - MGP_129S1SvImJ_P0055446 Ttn protein_coding protein_coding MGP_129S1SvImJ_T0055447.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77100835 77384809 - MGP_129S1SvImJ_P0055447 Ttn protein_coding protein_coding MGP_129S1SvImJ_T0055448.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77100835 77384809 - MGP_129S1SvImJ_P0055448 Ttn protein_coding unknown_likely_coding MGP_129S1SvImJ_T0055449.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77211064 77342252 - MGP_129S1SvImJ_P0055449 Ttn protein_coding protein_coding MGP_129S1SvImJ_T0055450.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77211572 77299688 - MGP_129S1SvImJ_P0055450 Ttn protein_coding protein_coding MGP_129S1SvImJ_T0055451.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77211606 77276782 - MGP_129S1SvImJ_P0055451 Ttn protein_coding protein_coding MGP_129S1SvImJ_T0055452.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77211607 77276782 - MGP_129S1SvImJ_P0055452 Ttn protein_coding protein_coding MGP_129S1SvImJ_T0055453.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77211607 77276782 - MGP_129S1SvImJ_P0055453 Ttn protein_coding protein_coding MGP_129S1SvImJ_T0055454.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77211607 77276782 - MGP_129S1SvImJ_P0055454 Ttn protein_coding protein_coding MGP_129S1SvImJ_T0055455.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77211625 77276782 - MGP_129S1SvImJ_P0055455 Ttn protein_coding protein_coding MGP_129S1SvImJ_T0055456.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77222897 77229877 - MGP_129S1SvImJ_P0055456 Ttn protein_coding protein_coding MGP_129S1SvImJ_T0055457.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77224296 77249536 - MGP_129S1SvImJ_P0055457 Ttn protein_coding protein_coding MGP_129S1SvImJ_T0055458.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77238310 77239234 - MGP_129S1SvImJ_P0055458 Ttn protein_coding protein_coding MGP_129S1SvImJ_T0055459.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77239085 77239992 - MGP_129S1SvImJ_P0055459 Ttn protein_coding protein_coding MGP_129S1SvImJ_T0055460.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77242849 77243699 - MGP_129S1SvImJ_P0055460 Ttn protein_coding protein_coding MGP_129S1SvImJ_T0055461.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77242849 77247279 - MGP_129S1SvImJ_P0055461 Ttn protein_coding protein_coding MGP_129S1SvImJ_T0055462.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77252625 77255562 - MGP_129S1SvImJ_P0055462 Ttn protein_coding protein_coding MGP_129S1SvImJ_T0055463.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77257662 77280375 - MGP_129S1SvImJ_P0055463 Ttn protein_coding protein_coding MGP_129S1SvImJ_T0055464.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77298513 77299270 - Ttn protein_coding processed_transcript MGP_129S1SvImJ_T0055465.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77324039 77387082 - MGP_129S1SvImJ_P0055465 Ttn protein_coding protein_coding MGP_129S1SvImJ_T0055466.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77345935 77348536 - Ttn protein_coding retained_intron MGP_129S1SvImJ_T0055467.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77368067 77387174 - Ttn protein_coding retained_intron MGP_129S1SvImJ_T0055468.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77368873 77387174 - MGP_129S1SvImJ_P0055468 Ttn protein_coding protein_coding MGP_129S1SvImJ_T0055469.1 MGP_129S1SvImJ_G0025870.1 mouse_genomes_project 2 77376873 77387174 - Ttn protein_coding retained_intron MGP_129S1SvImJ_T0054742.1 MGP_129S1SvImJ_G0025727.1 mouse_genomes_project 2 50383848 50402392 - MGP_129S1SvImJ_P0054742 Rnd3 protein_coding protein_coding MGP_129S1SvImJ_T0054743.1 MGP_129S1SvImJ_G0025727.1 mouse_genomes_project 2 50390509 50402606 - Rnd3 protein_coding retained_intron MGP_129S1SvImJ_T0102410.1 MGP_129S1SvImJ_G0040244.1 mouse_genomes_project 2 87410399 87411287 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0056430.1 MGP_129S1SvImJ_G0026205.1 mouse_genomes_project 2 105551670 105707539 + MGP_129S1SvImJ_P0056430 Abtb2 protein_coding protein_coding MGP_129S1SvImJ_T0056431.1 MGP_129S1SvImJ_G0026205.1 mouse_genomes_project 2 105704150 105706333 + Abtb2 protein_coding processed_transcript MGP_129S1SvImJ_T0056432.1 MGP_129S1SvImJ_G0026205.1 mouse_genomes_project 2 105704196 105707539 + Abtb2 protein_coding processed_transcript MGP_129S1SvImJ_T0057171.1 MGP_129S1SvImJ_G0026386.1 mouse_genomes_project 2 124175582 124196882 + MGP_129S1SvImJ_P0057171 Map1a protein_coding protein_coding MGP_129S1SvImJ_T0057172.1 MGP_129S1SvImJ_G0026386.1 mouse_genomes_project 2 124175752 124177026 + Map1a protein_coding processed_transcript MGP_129S1SvImJ_T0057173.1 MGP_129S1SvImJ_G0026386.1 mouse_genomes_project 2 124181450 124195475 + MGP_129S1SvImJ_P0057173 Map1a protein_coding protein_coding MGP_129S1SvImJ_T0057174.1 MGP_129S1SvImJ_G0026386.1 mouse_genomes_project 2 124181459 124193658 + Map1a protein_coding processed_transcript MGP_129S1SvImJ_T0052785.1 MGP_129S1SvImJ_G0025383.1 mouse_genomes_project 2 17204236 17307824 - MGP_129S1SvImJ_P0052785 4921504E06Rik protein_coding protein_coding MGP_129S1SvImJ_T0052786.1 MGP_129S1SvImJ_G0025383.1 mouse_genomes_project 2 17243719 17307824 - 4921504E06Rik protein_coding retained_intron MGP_129S1SvImJ_T0001069.1 MGP_129S1SvImJ_G0000998.1 mouse_genomes_project 2 11655932 11659406 + TEC TEC MGP_129S1SvImJ_T0010502.1 MGP_129S1SvImJ_G0008618.1 mouse_genomes_project 2 180613095 180613174 - Mir296 miRNA miRNA MGP_129S1SvImJ_T0059538.1 MGP_129S1SvImJ_G0026948.1 mouse_genomes_project 2 178738633 178749261 + MGP_129S1SvImJ_P0059538 Tfap2c protein_coding protein_coding MGP_129S1SvImJ_T0059539.1 MGP_129S1SvImJ_G0026948.1 mouse_genomes_project 2 178739692 178749246 + Tfap2c protein_coding processed_transcript MGP_129S1SvImJ_T0059540.1 MGP_129S1SvImJ_G0026948.1 mouse_genomes_project 2 178739803 178748460 + Tfap2c protein_coding processed_transcript MGP_129S1SvImJ_T0059541.1 MGP_129S1SvImJ_G0026948.1 mouse_genomes_project 2 178739821 178749258 + MGP_129S1SvImJ_P0059541 Tfap2c protein_coding protein_coding MGP_129S1SvImJ_T0059542.1 MGP_129S1SvImJ_G0026948.1 mouse_genomes_project 2 178740030 178749258 + MGP_129S1SvImJ_P0059542 Tfap2c protein_coding protein_coding MGP_129S1SvImJ_T0057367.1 MGP_129S1SvImJ_G0026429.1 mouse_genomes_project 2 128688018 128690811 + MGP_129S1SvImJ_P0057367 Gm9913 protein_coding protein_coding MGP_129S1SvImJ_T0007178.1 MGP_129S1SvImJ_G0005889.1 mouse_genomes_project 2 28918307 28931008 - Gm14486 lincRNA lincRNA MGP_129S1SvImJ_T0007179.1 MGP_129S1SvImJ_G0005889.1 mouse_genomes_project 2 28918452 28939107 - Gm14486 lincRNA lincRNA MGP_129S1SvImJ_T0058404.1 MGP_129S1SvImJ_G0026693.1 mouse_genomes_project 2 158051841 158191292 - MGP_129S1SvImJ_P0058404 Nol4l protein_coding protein_coding MGP_129S1SvImJ_T0058405.1 MGP_129S1SvImJ_G0026693.1 mouse_genomes_project 2 158064129 158095385 - Nol4l protein_coding processed_transcript MGP_129S1SvImJ_T0058406.1 MGP_129S1SvImJ_G0026693.1 mouse_genomes_project 2 158110688 158144385 - Nol4l protein_coding processed_transcript MGP_129S1SvImJ_T0058407.1 MGP_129S1SvImJ_G0026693.1 mouse_genomes_project 2 158116505 158153076 - Nol4l protein_coding processed_transcript MGP_129S1SvImJ_T0058408.1 MGP_129S1SvImJ_G0026693.1 mouse_genomes_project 2 158120304 158140370 - Nol4l protein_coding processed_transcript MGP_129S1SvImJ_T0053529.1 MGP_129S1SvImJ_G0025519.1 mouse_genomes_project 2 26213390 26235553 + Olfm1 protein_coding processed_transcript MGP_129S1SvImJ_T0053530.1 MGP_129S1SvImJ_G0025519.1 mouse_genomes_project 2 26213390 26254598 + MGP_129S1SvImJ_P0053530 Olfm1 protein_coding protein_coding MGP_129S1SvImJ_T0053531.1 MGP_129S1SvImJ_G0025519.1 mouse_genomes_project 2 26213491 26254872 + MGP_129S1SvImJ_P0053531 Olfm1 protein_coding protein_coding MGP_129S1SvImJ_T0053532.1 MGP_129S1SvImJ_G0025519.1 mouse_genomes_project 2 26225939 26235553 + MGP_129S1SvImJ_P0053532 Olfm1 protein_coding protein_coding MGP_129S1SvImJ_T0053533.1 MGP_129S1SvImJ_G0025519.1 mouse_genomes_project 2 26225939 26254872 + MGP_129S1SvImJ_P0053533 Olfm1 protein_coding protein_coding MGP_129S1SvImJ_T0057208.1 MGP_129S1SvImJ_G0026390.1 mouse_genomes_project 2 124283430 124310874 - MGP_129S1SvImJ_P0057208 Catsper2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057209.1 MGP_129S1SvImJ_G0026390.1 mouse_genomes_project 2 124283433 124311024 - MGP_129S1SvImJ_P0057209 Catsper2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0057210.1 MGP_129S1SvImJ_G0026390.1 mouse_genomes_project 2 124285156 124311057 - MGP_129S1SvImJ_P0057210 Catsper2 protein_coding protein_coding MGP_129S1SvImJ_T0057211.1 MGP_129S1SvImJ_G0026390.1 mouse_genomes_project 2 124285158 124289145 - Catsper2 protein_coding retained_intron MGP_129S1SvImJ_T0057212.1 MGP_129S1SvImJ_G0026390.1 mouse_genomes_project 2 124307502 124309561 - Catsper2 protein_coding retained_intron MGP_129S1SvImJ_T0058888.1 MGP_129S1SvImJ_G0026785.1 mouse_genomes_project 2 162761180 162923377 + MGP_129S1SvImJ_P0058888 Ctnnbl1 protein_coding protein_coding MGP_129S1SvImJ_T0058889.1 MGP_129S1SvImJ_G0026785.1 mouse_genomes_project 2 162815806 162835270 + Ctnnbl1 protein_coding processed_transcript MGP_129S1SvImJ_T0058890.1 MGP_129S1SvImJ_G0026785.1 mouse_genomes_project 2 162817222 162846336 + Ctnnbl1 protein_coding processed_transcript MGP_129S1SvImJ_T0058891.1 MGP_129S1SvImJ_G0026785.1 mouse_genomes_project 2 162817255 162864976 + Ctnnbl1 protein_coding processed_transcript MGP_129S1SvImJ_T0099698.1 MGP_129S1SvImJ_G0037765.1 mouse_genomes_project 2 132698758 132698909 - Gm25703 snRNA snRNA MGP_129S1SvImJ_T0054779.1 MGP_129S1SvImJ_G0025734.1 mouse_genomes_project 2 51724818 51757890 - MGP_129S1SvImJ_P0054779 Arl5a protein_coding protein_coding MGP_129S1SvImJ_T0054780.1 MGP_129S1SvImJ_G0025734.1 mouse_genomes_project 2 51729364 51739307 - Arl5a protein_coding retained_intron MGP_129S1SvImJ_T0010429.1 MGP_129S1SvImJ_G0008545.1 mouse_genomes_project 2 44096347 44096425 - Mir5129 miRNA miRNA MGP_129S1SvImJ_T0058371.1 MGP_129S1SvImJ_G0026685.1 mouse_genomes_project 2 157640414 157664432 + MGP_129S1SvImJ_P0058371 Xkr7 protein_coding protein_coding MGP_129S1SvImJ_T0053253.1 MGP_129S1SvImJ_G0025470.1 mouse_genomes_project 2 23701879 23705142 + MGP_129S1SvImJ_P0053253 Lcn11 protein_coding protein_coding MGP_129S1SvImJ_T0054497.1 MGP_129S1SvImJ_G0025681.1 mouse_genomes_project 2 35606792 35607725 - MGP_129S1SvImJ_P0054497 Olfr355 protein_coding protein_coding MGP_129S1SvImJ_T0055930.1 MGP_129S1SvImJ_G0026112.1 mouse_genomes_project 2 91033576 91039885 - MGP_129S1SvImJ_P0055930 Olfr1256 protein_coding protein_coding MGP_129S1SvImJ_T0055931.1 MGP_129S1SvImJ_G0026112.1 mouse_genomes_project 2 91033576 91034497 - MGP_129S1SvImJ_P0055931 Olfr1256 protein_coding protein_coding MGP_129S1SvImJ_T0054648.1 MGP_129S1SvImJ_G0025717.1 mouse_genomes_project 2 43601345 43796532 - MGP_129S1SvImJ_P0054648 Gtdc1 protein_coding protein_coding MGP_129S1SvImJ_T0054649.1 MGP_129S1SvImJ_G0025717.1 mouse_genomes_project 2 43601347 43925596 - MGP_129S1SvImJ_P0054649 Gtdc1 protein_coding protein_coding MGP_129S1SvImJ_T0054650.1 MGP_129S1SvImJ_G0025717.1 mouse_genomes_project 2 43602063 43608279 - Gtdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0054651.1 MGP_129S1SvImJ_G0025717.1 mouse_genomes_project 2 43607301 43608646 - Gtdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0054652.1 MGP_129S1SvImJ_G0025717.1 mouse_genomes_project 2 43612411 43996840 - MGP_129S1SvImJ_P0054652 Gtdc1 protein_coding protein_coding MGP_129S1SvImJ_T0054653.1 MGP_129S1SvImJ_G0025717.1 mouse_genomes_project 2 43672234 43996943 - Gtdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0054654.1 MGP_129S1SvImJ_G0025717.1 mouse_genomes_project 2 43674369 43997336 - MGP_129S1SvImJ_P0054654 Gtdc1 protein_coding protein_coding MGP_129S1SvImJ_T0054655.1 MGP_129S1SvImJ_G0025717.1 mouse_genomes_project 2 43791989 43882870 - Gtdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0054656.1 MGP_129S1SvImJ_G0025717.1 mouse_genomes_project 2 43828602 43996915 - MGP_129S1SvImJ_P0054656 Gtdc1 protein_coding protein_coding MGP_129S1SvImJ_T0054657.1 MGP_129S1SvImJ_G0025717.1 mouse_genomes_project 2 43832521 43996913 - Gtdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0054658.1 MGP_129S1SvImJ_G0025717.1 mouse_genomes_project 2 43834986 43996828 - Gtdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0010424.1 MGP_129S1SvImJ_G0008540.1 mouse_genomes_project 2 36957184 36957266 - Gm44455 miRNA miRNA MGP_129S1SvImJ_T0010420.1 MGP_129S1SvImJ_G0008536.1 mouse_genomes_project 2 31199404 31199486 - Mir2861 miRNA miRNA MGP_129S1SvImJ_T0003932.1 MGP_129S1SvImJ_G0003516.1 mouse_genomes_project 2 18481590 18485445 - Gm13362 antisense antisense MGP_129S1SvImJ_T0054910.1 MGP_129S1SvImJ_G0025759.1 mouse_genomes_project 2 59790661 59830658 + MGP_129S1SvImJ_P0054910 March7 protein_coding protein_coding MGP_129S1SvImJ_T0054911.1 MGP_129S1SvImJ_G0025759.1 mouse_genomes_project 2 59790687 59832123 + March7 protein_coding processed_transcript MGP_129S1SvImJ_T0054912.1 MGP_129S1SvImJ_G0025759.1 mouse_genomes_project 2 59790847 59829420 + MGP_129S1SvImJ_P0054912 March7 protein_coding protein_coding MGP_129S1SvImJ_T0054913.1 MGP_129S1SvImJ_G0025759.1 mouse_genomes_project 2 59806220 59829403 + MGP_129S1SvImJ_P0054913 March7 protein_coding protein_coding MGP_129S1SvImJ_T0054914.1 MGP_129S1SvImJ_G0025759.1 mouse_genomes_project 2 59813563 59815845 + March7 protein_coding processed_transcript MGP_129S1SvImJ_T0054915.1 MGP_129S1SvImJ_G0025759.1 mouse_genomes_project 2 59818202 59829403 + MGP_129S1SvImJ_P0054915 March7 protein_coding protein_coding MGP_129S1SvImJ_T0054916.1 MGP_129S1SvImJ_G0025759.1 mouse_genomes_project 2 59818336 59824582 + March7 protein_coding processed_transcript MGP_129S1SvImJ_T0054917.1 MGP_129S1SvImJ_G0025759.1 mouse_genomes_project 2 59824517 59829401 + March7 protein_coding processed_transcript MGP_129S1SvImJ_T0054918.1 MGP_129S1SvImJ_G0025759.1 mouse_genomes_project 2 59828788 59829403 + March7 protein_coding processed_transcript MGP_129S1SvImJ_T0058433.1 MGP_129S1SvImJ_G0026701.1 mouse_genomes_project 2 158609585 158621989 + MGP_129S1SvImJ_P0058433 Bpifb6 protein_coding protein_coding MGP_129S1SvImJ_T0058434.1 MGP_129S1SvImJ_G0026701.1 mouse_genomes_project 2 158609592 158616121 + MGP_129S1SvImJ_P0058434 Bpifb6 protein_coding protein_coding MGP_129S1SvImJ_T0013421.1 MGP_129S1SvImJ_G0011510.1 mouse_genomes_project 2 2030186 2030497 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055041.1 MGP_129S1SvImJ_G0025780.1 mouse_genomes_project 2 65436784 65503068 + MGP_129S1SvImJ_P0055041 Scn2a1 protein_coding protein_coding MGP_129S1SvImJ_T0055042.1 MGP_129S1SvImJ_G0025780.1 mouse_genomes_project 2 65436784 65575371 + MGP_129S1SvImJ_P0055042 Scn2a1 protein_coding protein_coding MGP_129S1SvImJ_T0055043.1 MGP_129S1SvImJ_G0025780.1 mouse_genomes_project 2 65436824 65439278 + Scn2a1 protein_coding retained_intron MGP_129S1SvImJ_T0055044.1 MGP_129S1SvImJ_G0025780.1 mouse_genomes_project 2 65481594 65484690 + Scn2a1 protein_coding retained_intron MGP_129S1SvImJ_T0055045.1 MGP_129S1SvImJ_G0025780.1 mouse_genomes_project 2 65481673 65573015 + MGP_129S1SvImJ_P0055045 Scn2a1 protein_coding protein_coding MGP_129S1SvImJ_T0055046.1 MGP_129S1SvImJ_G0025780.1 mouse_genomes_project 2 65483337 65575371 + MGP_129S1SvImJ_P0055046 Scn2a1 protein_coding protein_coding MGP_129S1SvImJ_T0055047.1 MGP_129S1SvImJ_G0025780.1 mouse_genomes_project 2 65495172 65496759 + Scn2a1 protein_coding retained_intron MGP_129S1SvImJ_T0055048.1 MGP_129S1SvImJ_G0025780.1 mouse_genomes_project 2 65533378 65544268 + MGP_129S1SvImJ_P0055048 Scn2a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055049.1 MGP_129S1SvImJ_G0025780.1 mouse_genomes_project 2 65533401 65544219 + MGP_129S1SvImJ_P0055049 Scn2a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054729.1 MGP_129S1SvImJ_G0025725.1 mouse_genomes_project 2 49281417 49413478 + MGP_129S1SvImJ_P0054729 Lypd6 protein_coding protein_coding MGP_129S1SvImJ_T0054730.1 MGP_129S1SvImJ_G0025725.1 mouse_genomes_project 2 49281450 49410575 + MGP_129S1SvImJ_P0054730 Lypd6 protein_coding protein_coding MGP_129S1SvImJ_T0054731.1 MGP_129S1SvImJ_G0025725.1 mouse_genomes_project 2 49281452 49413473 + MGP_129S1SvImJ_P0054731 Lypd6 protein_coding protein_coding MGP_129S1SvImJ_T0054732.1 MGP_129S1SvImJ_G0025725.1 mouse_genomes_project 2 49345461 49413472 + MGP_129S1SvImJ_P0054732 Lypd6 protein_coding protein_coding MGP_129S1SvImJ_T0054733.1 MGP_129S1SvImJ_G0025725.1 mouse_genomes_project 2 49385866 49393681 + MGP_129S1SvImJ_P0054733 Lypd6 protein_coding protein_coding MGP_129S1SvImJ_T0003945.1 MGP_129S1SvImJ_G0003525.1 mouse_genomes_project 2 24158409 24160990 + Gm27196 antisense antisense MGP_129S1SvImJ_T0057961.1 MGP_129S1SvImJ_G0026567.1 mouse_genomes_project 2 144043787 144098386 - MGP_129S1SvImJ_P0057961 Esf1 protein_coding protein_coding MGP_129S1SvImJ_T0057962.1 MGP_129S1SvImJ_G0026567.1 mouse_genomes_project 2 144076321 144082828 - Esf1 protein_coding retained_intron MGP_129S1SvImJ_T0057964.1 MGP_129S1SvImJ_G0026567.1 mouse_genomes_project 2 144084408 144087992 - Esf1 protein_coding retained_intron MGP_129S1SvImJ_T0057965.1 MGP_129S1SvImJ_G0026567.1 mouse_genomes_project 2 144084443 144086352 - Esf1 protein_coding retained_intron MGP_129S1SvImJ_T0057966.1 MGP_129S1SvImJ_G0026567.1 mouse_genomes_project 2 144086871 144087992 - Esf1 protein_coding retained_intron MGP_129S1SvImJ_T0013640.1 MGP_129S1SvImJ_G0011729.1 mouse_genomes_project 2 83291416 83291756 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100956.1 MGP_129S1SvImJ_G0039023.1 mouse_genomes_project 2 98893507 98893636 + Gm22313 snoRNA snoRNA MGP_129S1SvImJ_T0055817.1 MGP_129S1SvImJ_G0026015.1 mouse_genomes_project 2 88689357 88690281 + MGP_129S1SvImJ_P0055817 protein_coding protein_coding MGP_129S1SvImJ_T0056381.1 MGP_129S1SvImJ_G0026196.1 mouse_genomes_project 2 104368237 104372890 - MGP_129S1SvImJ_P0056381 Fjx1 protein_coding protein_coding MGP_129S1SvImJ_T0013765.1 MGP_129S1SvImJ_G0011854.1 mouse_genomes_project 2 131895296 131896277 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099696.1 MGP_129S1SvImJ_G0037763.1 mouse_genomes_project 2 129857874 129858023 - Gm23753 snRNA snRNA MGP_129S1SvImJ_T0056008.1 MGP_129S1SvImJ_G0026137.1 mouse_genomes_project 2 92229618 92285223 + Celf1 protein_coding processed_transcript MGP_129S1SvImJ_T0056009.1 MGP_129S1SvImJ_G0026137.1 mouse_genomes_project 2 92229633 92320079 + MGP_129S1SvImJ_P0056009 Celf1 protein_coding protein_coding MGP_129S1SvImJ_T0056010.1 MGP_129S1SvImJ_G0026137.1 mouse_genomes_project 2 92229694 92296463 + Celf1 protein_coding processed_transcript MGP_129S1SvImJ_T0056011.1 MGP_129S1SvImJ_G0026137.1 mouse_genomes_project 2 92229773 92299835 + Celf1 protein_coding processed_transcript MGP_129S1SvImJ_T0056012.1 MGP_129S1SvImJ_G0026137.1 mouse_genomes_project 2 92231111 92319323 + MGP_129S1SvImJ_P0056012 Celf1 protein_coding protein_coding MGP_129S1SvImJ_T0056013.1 MGP_129S1SvImJ_G0026137.1 mouse_genomes_project 2 92263064 92285285 + Celf1 protein_coding processed_transcript MGP_129S1SvImJ_T0056014.1 MGP_129S1SvImJ_G0026137.1 mouse_genomes_project 2 92285214 92320072 + MGP_129S1SvImJ_P0056014 Celf1 protein_coding protein_coding MGP_129S1SvImJ_T0056015.1 MGP_129S1SvImJ_G0026137.1 mouse_genomes_project 2 92296425 92320079 + MGP_129S1SvImJ_P0056015 Celf1 protein_coding protein_coding MGP_129S1SvImJ_T0056016.1 MGP_129S1SvImJ_G0026137.1 mouse_genomes_project 2 92313070 92313954 + Celf1 protein_coding processed_transcript MGP_129S1SvImJ_T0055839.1 MGP_129S1SvImJ_G0026035.1 mouse_genomes_project 2 88996737 88997709 - MGP_129S1SvImJ_P0055839 Olfr1156 protein_coding protein_coding MGP_129S1SvImJ_T0055787.1 MGP_129S1SvImJ_G0025993.1 mouse_genomes_project 2 88018479 88019418 - MGP_129S1SvImJ_P0055787 Olfr1105 protein_coding protein_coding MGP_129S1SvImJ_T0004205.1 MGP_129S1SvImJ_G0003713.1 mouse_genomes_project 2 180627283 180641326 - Nespas antisense antisense MGP_129S1SvImJ_T0004206.1 MGP_129S1SvImJ_G0003713.1 mouse_genomes_project 2 180628240 180641279 - Nespas antisense antisense MGP_129S1SvImJ_T0004207.1 MGP_129S1SvImJ_G0003713.1 mouse_genomes_project 2 180630396 180631479 - Nespas antisense antisense MGP_129S1SvImJ_T0058115.1 MGP_129S1SvImJ_G0026600.1 mouse_genomes_project 2 151091171 151224480 + MGP_129S1SvImJ_P0058115 Kiz protein_coding protein_coding MGP_129S1SvImJ_T0058116.1 MGP_129S1SvImJ_G0026600.1 mouse_genomes_project 2 151091216 151125613 + MGP_129S1SvImJ_P0058116 Kiz protein_coding protein_coding MGP_129S1SvImJ_T0058117.1 MGP_129S1SvImJ_G0026600.1 mouse_genomes_project 2 151206865 151224475 + Kiz protein_coding retained_intron MGP_129S1SvImJ_T0056684.1 MGP_129S1SvImJ_G0026289.1 mouse_genomes_project 2 114810320 114815348 - MGP_129S1SvImJ_P0056684 Emc4 protein_coding protein_coding MGP_129S1SvImJ_T0056685.1 MGP_129S1SvImJ_G0026289.1 mouse_genomes_project 2 114811113 114815341 - Emc4 protein_coding processed_transcript MGP_129S1SvImJ_T0013592.1 MGP_129S1SvImJ_G0011681.1 mouse_genomes_project 2 66807252 66807745 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001061.1 MGP_129S1SvImJ_G0000990.1 mouse_genomes_project 2 10482703 10485304 + TEC TEC MGP_129S1SvImJ_T0055782.1 MGP_129S1SvImJ_G0025988.1 mouse_genomes_project 2 87940554 87941493 - MGP_129S1SvImJ_P0055782 Olfr1099 protein_coding protein_coding MGP_129S1SvImJ_T0053202.1 MGP_129S1SvImJ_G0025454.1 mouse_genomes_project 2 23458626 23462862 + MGP_129S1SvImJ_P0053202 Edf1 protein_coding protein_coding MGP_129S1SvImJ_T0053203.1 MGP_129S1SvImJ_G0025454.1 mouse_genomes_project 2 23458650 23462141 + Edf1 protein_coding processed_transcript MGP_129S1SvImJ_T0053204.1 MGP_129S1SvImJ_G0025454.1 mouse_genomes_project 2 23458676 23462044 + Edf1 protein_coding processed_transcript MGP_129S1SvImJ_T0053205.1 MGP_129S1SvImJ_G0025454.1 mouse_genomes_project 2 23458918 23462641 + Edf1 protein_coding processed_transcript MGP_129S1SvImJ_T0053206.1 MGP_129S1SvImJ_G0025454.1 mouse_genomes_project 2 23461364 23462862 + Edf1 protein_coding processed_transcript MGP_129S1SvImJ_T0058315.1 MGP_129S1SvImJ_G0026668.1 mouse_genomes_project 2 157136318 157138519 + MGP_129S1SvImJ_P0058315 Defb21 protein_coding protein_coding MGP_129S1SvImJ_T0056921.1 MGP_129S1SvImJ_G0026350.1 mouse_genomes_project 2 122568896 122581710 + MGP_129S1SvImJ_P0056921 Itpka protein_coding protein_coding MGP_129S1SvImJ_T0099665.1 MGP_129S1SvImJ_G0037732.1 mouse_genomes_project 2 28103609 28103706 - Gm23865 snRNA snRNA MGP_129S1SvImJ_T0007392.1 MGP_129S1SvImJ_G0006065.1 mouse_genomes_project 2 170005870 170015051 + Gm14317 lincRNA lincRNA MGP_129S1SvImJ_T0007354.1 MGP_129S1SvImJ_G0006032.1 mouse_genomes_project 2 151063147 151074553 - Gm14114 lincRNA lincRNA MGP_129S1SvImJ_T0058134.1 MGP_129S1SvImJ_G0026606.1 mouse_genomes_project 2 152736809 152738233 + MGP_129S1SvImJ_P0058134 Sstr4 protein_coding protein_coding MGP_129S1SvImJ_T0098854.1 MGP_129S1SvImJ_G0036933.1 mouse_genomes_project 2 1242841 1245114 + Gm38348 sense_intronic sense_intronic MGP_129S1SvImJ_T0013801.1 MGP_129S1SvImJ_G0011890.1 mouse_genomes_project 2 147144334 147144954 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059767.1 MGP_129S1SvImJ_G0027007.1 mouse_genomes_project 2 187535779 187550996 + MGP_129S1SvImJ_P0059767 Arfgap1 protein_coding protein_coding MGP_129S1SvImJ_T0059768.1 MGP_129S1SvImJ_G0027007.1 mouse_genomes_project 2 187535788 187551064 + MGP_129S1SvImJ_P0059768 Arfgap1 protein_coding protein_coding MGP_129S1SvImJ_T0059769.1 MGP_129S1SvImJ_G0027007.1 mouse_genomes_project 2 187535799 187550238 + MGP_129S1SvImJ_P0059769 Arfgap1 protein_coding protein_coding MGP_129S1SvImJ_T0059770.1 MGP_129S1SvImJ_G0027007.1 mouse_genomes_project 2 187535819 187550998 + Arfgap1 protein_coding retained_intron MGP_129S1SvImJ_T0059771.1 MGP_129S1SvImJ_G0027007.1 mouse_genomes_project 2 187535821 187550984 + Arfgap1 protein_coding processed_transcript MGP_129S1SvImJ_T0059772.1 MGP_129S1SvImJ_G0027007.1 mouse_genomes_project 2 187535831 187550998 + MGP_129S1SvImJ_P0059772 Arfgap1 protein_coding protein_coding MGP_129S1SvImJ_T0059773.1 MGP_129S1SvImJ_G0027007.1 mouse_genomes_project 2 187535833 187541487 + Arfgap1 protein_coding retained_intron MGP_129S1SvImJ_T0059774.1 MGP_129S1SvImJ_G0027007.1 mouse_genomes_project 2 187535854 187550849 + MGP_129S1SvImJ_P0059774 Arfgap1 protein_coding protein_coding MGP_129S1SvImJ_T0059775.1 MGP_129S1SvImJ_G0027007.1 mouse_genomes_project 2 187539597 187550011 + MGP_129S1SvImJ_P0059775 Arfgap1 protein_coding protein_coding MGP_129S1SvImJ_T0059776.1 MGP_129S1SvImJ_G0027007.1 mouse_genomes_project 2 187539612 187549908 + MGP_129S1SvImJ_P0059776 Arfgap1 protein_coding protein_coding MGP_129S1SvImJ_T0059777.1 MGP_129S1SvImJ_G0027007.1 mouse_genomes_project 2 187542043 187545292 + Arfgap1 protein_coding retained_intron MGP_129S1SvImJ_T0059778.1 MGP_129S1SvImJ_G0027007.1 mouse_genomes_project 2 187542060 187546580 + Arfgap1 protein_coding retained_intron MGP_129S1SvImJ_T0059779.1 MGP_129S1SvImJ_G0027007.1 mouse_genomes_project 2 187542388 187546064 + Arfgap1 protein_coding retained_intron MGP_129S1SvImJ_T0059780.1 MGP_129S1SvImJ_G0027007.1 mouse_genomes_project 2 187548886 187549935 + Arfgap1 protein_coding processed_transcript MGP_129S1SvImJ_T0056248.1 MGP_129S1SvImJ_G0026169.1 mouse_genomes_project 2 93883148 93890192 - MGP_129S1SvImJ_P0056248 Slc35c1 protein_coding protein_coding MGP_129S1SvImJ_T0056249.1 MGP_129S1SvImJ_G0026169.1 mouse_genomes_project 2 93883151 93890936 - MGP_129S1SvImJ_P0056249 Slc35c1 protein_coding protein_coding MGP_129S1SvImJ_T0056250.1 MGP_129S1SvImJ_G0026169.1 mouse_genomes_project 2 93889083 93890107 - MGP_129S1SvImJ_P0056250 Slc35c1 protein_coding protein_coding MGP_129S1SvImJ_T0004190.1 MGP_129S1SvImJ_G0003702.1 mouse_genomes_project 2 173806147 173807125 + Gm14236 antisense antisense MGP_129S1SvImJ_T0102402.1 MGP_129S1SvImJ_G0040236.1 mouse_genomes_project 2 86589072 86589759 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0055796.1 MGP_129S1SvImJ_G0026002.1 mouse_genomes_project 2 88279503 88290682 + MGP_129S1SvImJ_P0055796 Olfr1116 protein_coding protein_coding MGP_129S1SvImJ_T0001071.1 MGP_129S1SvImJ_G0001000.1 mouse_genomes_project 2 12195147 12196556 + TEC TEC MGP_129S1SvImJ_T0055837.1 MGP_129S1SvImJ_G0026033.1 mouse_genomes_project 2 88967083 88968079 - MGP_129S1SvImJ_P0055837 Olfr1154 protein_coding protein_coding MGP_129S1SvImJ_T0013703.1 MGP_129S1SvImJ_G0011792.1 mouse_genomes_project 2 105201532 105201959 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013615.1 MGP_129S1SvImJ_G0011704.1 mouse_genomes_project 2 75997572 75999524 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013505.1 MGP_129S1SvImJ_G0011594.1 mouse_genomes_project 2 35879503 35880526 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004111.1 MGP_129S1SvImJ_G0003643.1 mouse_genomes_project 2 136084270 136106775 + 1700026D11Rik antisense antisense MGP_129S1SvImJ_T0004112.1 MGP_129S1SvImJ_G0003643.1 mouse_genomes_project 2 136084352 136108370 + 1700026D11Rik antisense antisense MGP_129S1SvImJ_T0004113.1 MGP_129S1SvImJ_G0003643.1 mouse_genomes_project 2 136084352 136106816 + 1700026D11Rik antisense antisense MGP_129S1SvImJ_T0004114.1 MGP_129S1SvImJ_G0003643.1 mouse_genomes_project 2 136084364 136118492 + 1700026D11Rik antisense antisense MGP_129S1SvImJ_T0004115.1 MGP_129S1SvImJ_G0003643.1 mouse_genomes_project 2 136084380 136106776 + 1700026D11Rik antisense antisense MGP_129S1SvImJ_T0004116.1 MGP_129S1SvImJ_G0003643.1 mouse_genomes_project 2 136084380 136118321 + 1700026D11Rik antisense antisense MGP_129S1SvImJ_T0059447.1 MGP_129S1SvImJ_G0026923.1 mouse_genomes_project 2 174010534 174061552 - MGP_129S1SvImJ_P0059447 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0055267.1 MGP_129S1SvImJ_G0025825.1 mouse_genomes_project 2 71662759 71666106 - MGP_129S1SvImJ_P0055267 Dlx2 protein_coding protein_coding MGP_129S1SvImJ_T0055268.1 MGP_129S1SvImJ_G0025825.1 mouse_genomes_project 2 71664217 71665302 - Dlx2 protein_coding retained_intron MGP_129S1SvImJ_T0056843.1 MGP_129S1SvImJ_G0026328.1 mouse_genomes_project 2 121745515 121757518 - MGP_129S1SvImJ_P0056843 Ccdc32 protein_coding protein_coding MGP_129S1SvImJ_T0056844.1 MGP_129S1SvImJ_G0026328.1 mouse_genomes_project 2 121749452 121757518 - MGP_129S1SvImJ_P0056844 Ccdc32 protein_coding protein_coding MGP_129S1SvImJ_T0056845.1 MGP_129S1SvImJ_G0026328.1 mouse_genomes_project 2 121749523 121757502 - MGP_129S1SvImJ_P0056845 Ccdc32 protein_coding protein_coding MGP_129S1SvImJ_T0017773.1 MGP_129S1SvImJ_G0015399.1 mouse_genomes_project 2 22249557 22297870 + Gm13415 processed_transcript antisense MGP_129S1SvImJ_T0017774.1 MGP_129S1SvImJ_G0015399.1 mouse_genomes_project 2 22251974 22274451 + Gm13415 processed_transcript antisense MGP_129S1SvImJ_T0017775.1 MGP_129S1SvImJ_G0015399.1 mouse_genomes_project 2 22251988 22254404 + Gm13415 processed_transcript retained_intron MGP_129S1SvImJ_T0013842.1 MGP_129S1SvImJ_G0011931.1 mouse_genomes_project 2 159655967 159677813 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056690.1 MGP_129S1SvImJ_G0026293.1 mouse_genomes_project 2 114945963 115086881 + MGP_129S1SvImJ_P0056690 Aven protein_coding protein_coding MGP_129S1SvImJ_T0056691.1 MGP_129S1SvImJ_G0026293.1 mouse_genomes_project 2 115009529 115082386 + Aven protein_coding processed_transcript MGP_129S1SvImJ_T0056692.1 MGP_129S1SvImJ_G0026293.1 mouse_genomes_project 2 115009881 115083221 + MGP_129S1SvImJ_P0056692 Aven protein_coding protein_coding MGP_129S1SvImJ_T0055405.1 MGP_129S1SvImJ_G0025856.1 mouse_genomes_project 2 76022872 76030431 + MGP_129S1SvImJ_P0055405 Hnrnpa3 protein_coding protein_coding MGP_129S1SvImJ_T0055406.1 MGP_129S1SvImJ_G0025856.1 mouse_genomes_project 2 76022891 76025630 + Hnrnpa3 protein_coding retained_intron MGP_129S1SvImJ_T0055407.1 MGP_129S1SvImJ_G0025856.1 mouse_genomes_project 2 76026085 76030431 + MGP_129S1SvImJ_P0055407 Hnrnpa3 protein_coding protein_coding MGP_129S1SvImJ_T0004146.1 MGP_129S1SvImJ_G0003667.1 mouse_genomes_project 2 157113294 157117542 - Gm14161 antisense antisense MGP_129S1SvImJ_T0007302.1 MGP_129S1SvImJ_G0005991.1 mouse_genomes_project 2 117670157 117672394 + Gm28493 lincRNA lincRNA MGP_129S1SvImJ_T0010349.1 MGP_129S1SvImJ_G0008465.1 mouse_genomes_project 2 7821624 7821745 + Gm22072 miRNA miRNA MGP_129S1SvImJ_T0054857.1 MGP_129S1SvImJ_G0025754.1 mouse_genomes_project 2 58679403 58879285 + MGP_129S1SvImJ_P0054857 Pkp4 protein_coding protein_coding MGP_129S1SvImJ_T0054858.1 MGP_129S1SvImJ_G0025754.1 mouse_genomes_project 2 58679403 58879286 + MGP_129S1SvImJ_P0054858 Pkp4 protein_coding protein_coding MGP_129S1SvImJ_T0054859.1 MGP_129S1SvImJ_G0025754.1 mouse_genomes_project 2 58679403 58878905 + MGP_129S1SvImJ_P0054859 Pkp4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054860.1 MGP_129S1SvImJ_G0025754.1 mouse_genomes_project 2 58679403 58861723 + MGP_129S1SvImJ_P0054860 Pkp4 protein_coding protein_coding MGP_129S1SvImJ_T0054861.1 MGP_129S1SvImJ_G0025754.1 mouse_genomes_project 2 58679431 58879289 + MGP_129S1SvImJ_P0054861 Pkp4 protein_coding protein_coding MGP_129S1SvImJ_T0054862.1 MGP_129S1SvImJ_G0025754.1 mouse_genomes_project 2 58679443 58827003 + Pkp4 protein_coding processed_transcript MGP_129S1SvImJ_T0054863.1 MGP_129S1SvImJ_G0025754.1 mouse_genomes_project 2 58679466 58861726 + MGP_129S1SvImJ_P0054863 Pkp4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054864.1 MGP_129S1SvImJ_G0025754.1 mouse_genomes_project 2 58680350 58735449 + Pkp4 protein_coding processed_transcript MGP_129S1SvImJ_T0054865.1 MGP_129S1SvImJ_G0025754.1 mouse_genomes_project 2 58680350 58827235 + MGP_129S1SvImJ_P0054865 Pkp4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054866.1 MGP_129S1SvImJ_G0025754.1 mouse_genomes_project 2 58720158 58735464 + Pkp4 protein_coding processed_transcript MGP_129S1SvImJ_T0054867.1 MGP_129S1SvImJ_G0025754.1 mouse_genomes_project 2 58735100 58879288 + MGP_129S1SvImJ_P0054867 Pkp4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0054868.1 MGP_129S1SvImJ_G0025754.1 mouse_genomes_project 2 58750166 58879286 + MGP_129S1SvImJ_P0054868 Pkp4 protein_coding protein_coding MGP_129S1SvImJ_T0054869.1 MGP_129S1SvImJ_G0025754.1 mouse_genomes_project 2 58788030 58830106 + Pkp4 protein_coding processed_transcript MGP_129S1SvImJ_T0054870.1 MGP_129S1SvImJ_G0025754.1 mouse_genomes_project 2 58845614 58879286 + Pkp4 protein_coding processed_transcript MGP_129S1SvImJ_T0054871.1 MGP_129S1SvImJ_G0025754.1 mouse_genomes_project 2 58865046 58871106 + Pkp4 protein_coding processed_transcript MGP_129S1SvImJ_T0055761.1 MGP_129S1SvImJ_G0025969.1 mouse_genomes_project 2 87215450 87216392 - MGP_129S1SvImJ_P0055761 Olfr1056 protein_coding protein_coding MGP_129S1SvImJ_T0057936.1 MGP_129S1SvImJ_G0026559.1 mouse_genomes_project 2 140504094 140575446 + MGP_129S1SvImJ_P0057936 Snap25 protein_coding protein_coding MGP_129S1SvImJ_T0057937.1 MGP_129S1SvImJ_G0026559.1 mouse_genomes_project 2 140504095 140555987 + Snap25 protein_coding retained_intron MGP_129S1SvImJ_T0057938.1 MGP_129S1SvImJ_G0026559.1 mouse_genomes_project 2 140504119 140574368 + MGP_129S1SvImJ_P0057938 Snap25 protein_coding protein_coding MGP_129S1SvImJ_T0100976.1 MGP_129S1SvImJ_G0039043.1 mouse_genomes_project 2 148338623 148338861 - Snord17 snoRNA snoRNA MGP_129S1SvImJ_T0013697.1 MGP_129S1SvImJ_G0011786.1 mouse_genomes_project 2 102241531 102242878 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055856.1 MGP_129S1SvImJ_G0026051.1 mouse_genomes_project 2 89508995 89509925 - MGP_129S1SvImJ_P0055856 Olfr1180 protein_coding protein_coding MGP_129S1SvImJ_T0011513.1 MGP_129S1SvImJ_G0009629.1 mouse_genomes_project 2 32356650 32357020 + Nron misc_RNA misc_RNA MGP_129S1SvImJ_T0100994.1 MGP_129S1SvImJ_G0039061.1 mouse_genomes_project 2 164260079 164260211 + Gm25090 snoRNA snoRNA MGP_129S1SvImJ_T0017770.1 MGP_129S1SvImJ_G0015397.1 mouse_genomes_project 2 16462478 16478581 - Gm20539 processed_transcript processed_transcript MGP_129S1SvImJ_T0056806.1 MGP_129S1SvImJ_G0026319.1 mouse_genomes_project 2 121396169 121401030 - MGP_129S1SvImJ_P0056806 Ankrd63 protein_coding protein_coding MGP_129S1SvImJ_T0098557.1 MGP_129S1SvImJ_G0036642.1 mouse_genomes_project 2 18985030 18985161 + Gm25368 rRNA rRNA MGP_129S1SvImJ_T0055765.1 MGP_129S1SvImJ_G0025973.1 mouse_genomes_project 2 87370759 87371701 - MGP_129S1SvImJ_P0055765 protein_coding protein_coding MGP_129S1SvImJ_T0058038.1 MGP_129S1SvImJ_G0026586.1 mouse_genomes_project 2 148573972 148633562 - MGP_129S1SvImJ_P0058038 Dzank1 protein_coding protein_coding MGP_129S1SvImJ_T0058039.1 MGP_129S1SvImJ_G0026586.1 mouse_genomes_project 2 148573972 148633578 - MGP_129S1SvImJ_P0058039 Dzank1 protein_coding protein_coding MGP_129S1SvImJ_T0058040.1 MGP_129S1SvImJ_G0026586.1 mouse_genomes_project 2 148613285 148633528 - Dzank1 protein_coding retained_intron MGP_129S1SvImJ_T0058041.1 MGP_129S1SvImJ_G0026586.1 mouse_genomes_project 2 148628602 148632811 - Dzank1 protein_coding processed_transcript MGP_129S1SvImJ_T0058707.1 MGP_129S1SvImJ_G0026757.1 mouse_genomes_project 2 160949681 160971317 - MGP_129S1SvImJ_P0058707 Rbm12 protein_coding protein_coding MGP_129S1SvImJ_T0058708.1 MGP_129S1SvImJ_G0026757.1 mouse_genomes_project 2 160949681 160971317 - MGP_129S1SvImJ_P0058708 Rbm12 protein_coding protein_coding MGP_129S1SvImJ_T0058709.1 MGP_129S1SvImJ_G0026757.1 mouse_genomes_project 2 160955238 160971277 - MGP_129S1SvImJ_P0058709 Rbm12 protein_coding protein_coding MGP_129S1SvImJ_T0058710.1 MGP_129S1SvImJ_G0026757.1 mouse_genomes_project 2 160955674 160971339 - MGP_129S1SvImJ_P0058710 Rbm12 protein_coding protein_coding MGP_129S1SvImJ_T0058711.1 MGP_129S1SvImJ_G0026757.1 mouse_genomes_project 2 160955703 160971322 - MGP_129S1SvImJ_P0058711 Rbm12 protein_coding protein_coding MGP_129S1SvImJ_T0003953.1 MGP_129S1SvImJ_G0003530.1 mouse_genomes_project 2 25165124 25210412 + Sardhos antisense antisense MGP_129S1SvImJ_T0054403.1 MGP_129S1SvImJ_G0025650.1 mouse_genomes_project 2 33809491 33830098 - MGP_129S1SvImJ_P0054403 Rab14 protein_coding protein_coding MGP_129S1SvImJ_T0054404.1 MGP_129S1SvImJ_G0025650.1 mouse_genomes_project 2 33809491 33830098 - MGP_129S1SvImJ_P0054404 Rab14 protein_coding protein_coding MGP_129S1SvImJ_T0054405.1 MGP_129S1SvImJ_G0025650.1 mouse_genomes_project 2 33811106 33813028 - Rab14 protein_coding processed_transcript MGP_129S1SvImJ_T0054406.1 MGP_129S1SvImJ_G0025650.1 mouse_genomes_project 2 33812167 33813126 - Rab14 protein_coding processed_transcript MGP_129S1SvImJ_T0054407.1 MGP_129S1SvImJ_G0025650.1 mouse_genomes_project 2 33812580 33829950 - Rab14 protein_coding retained_intron MGP_129S1SvImJ_T0054408.1 MGP_129S1SvImJ_G0025650.1 mouse_genomes_project 2 33815262 33821641 - Rab14 protein_coding processed_transcript MGP_129S1SvImJ_T0054409.1 MGP_129S1SvImJ_G0025650.1 mouse_genomes_project 2 33816683 33820400 - Rab14 protein_coding retained_intron MGP_129S1SvImJ_T0054410.1 MGP_129S1SvImJ_G0025650.1 mouse_genomes_project 2 33818877 33829767 - Rab14 protein_coding processed_transcript MGP_129S1SvImJ_T0054411.1 MGP_129S1SvImJ_G0025650.1 mouse_genomes_project 2 33820498 33821821 - Rab14 protein_coding processed_transcript MGP_129S1SvImJ_T0054412.1 MGP_129S1SvImJ_G0025650.1 mouse_genomes_project 2 33824957 33829960 - Rab14 protein_coding retained_intron MGP_129S1SvImJ_T0054413.1 MGP_129S1SvImJ_G0025650.1 mouse_genomes_project 2 33828851 33829956 - Rab14 protein_coding processed_transcript MGP_129S1SvImJ_T0099707.1 MGP_129S1SvImJ_G0037774.1 mouse_genomes_project 2 156963447 156963510 + Gm27343 snRNA snRNA MGP_129S1SvImJ_T0057253.1 MGP_129S1SvImJ_G0026400.1 mouse_genomes_project 2 124828855 124904049 + MGP_129S1SvImJ_P0057253 Casc4 protein_coding protein_coding MGP_129S1SvImJ_T0057254.1 MGP_129S1SvImJ_G0026400.1 mouse_genomes_project 2 124828855 124904049 + MGP_129S1SvImJ_P0057254 Casc4 protein_coding protein_coding MGP_129S1SvImJ_T0057255.1 MGP_129S1SvImJ_G0026400.1 mouse_genomes_project 2 124829014 124863202 + Casc4 protein_coding retained_intron MGP_129S1SvImJ_T0057256.1 MGP_129S1SvImJ_G0026400.1 mouse_genomes_project 2 124829015 124869177 + Casc4 protein_coding retained_intron MGP_129S1SvImJ_T0057257.1 MGP_129S1SvImJ_G0026400.1 mouse_genomes_project 2 124829015 124903934 + MGP_129S1SvImJ_P0057257 Casc4 protein_coding protein_coding MGP_129S1SvImJ_T0057258.1 MGP_129S1SvImJ_G0026400.1 mouse_genomes_project 2 124829015 124903896 + MGP_129S1SvImJ_P0057258 Casc4 protein_coding protein_coding MGP_129S1SvImJ_T0057259.1 MGP_129S1SvImJ_G0026400.1 mouse_genomes_project 2 124829590 124900430 + Casc4 protein_coding processed_transcript MGP_129S1SvImJ_T0057260.1 MGP_129S1SvImJ_G0026400.1 mouse_genomes_project 2 124861798 124900395 + MGP_129S1SvImJ_P0057260 Casc4 protein_coding protein_coding MGP_129S1SvImJ_T0011520.1 MGP_129S1SvImJ_G0009636.1 mouse_genomes_project 2 49111412 49111522 - Gm25223 misc_RNA misc_RNA MGP_129S1SvImJ_T0003989.1 MGP_129S1SvImJ_G0003560.1 mouse_genomes_project 2 43079169 43086029 - Arhgap15os antisense antisense MGP_129S1SvImJ_T0058795.1 MGP_129S1SvImJ_G0026767.1 mouse_genomes_project 2 161696214 161716889 + MGP_129S1SvImJ_P0058795 Myl9 protein_coding protein_coding MGP_129S1SvImJ_T0058796.1 MGP_129S1SvImJ_G0026767.1 mouse_genomes_project 2 161696248 161716592 + Myl9 protein_coding processed_transcript MGP_129S1SvImJ_T0058797.1 MGP_129S1SvImJ_G0026767.1 mouse_genomes_project 2 161696251 161715765 + Myl9 protein_coding processed_transcript MGP_129S1SvImJ_T0058798.1 MGP_129S1SvImJ_G0026767.1 mouse_genomes_project 2 161713747 161716395 + Myl9 protein_coding processed_transcript MGP_129S1SvImJ_T0013582.1 MGP_129S1SvImJ_G0011671.1 mouse_genomes_project 2 64339592 64340370 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057382.1 MGP_129S1SvImJ_G0026435.1 mouse_genomes_project 2 129071299 129072478 + Galk2 protein_coding processed_transcript MGP_129S1SvImJ_T0057383.1 MGP_129S1SvImJ_G0026435.1 mouse_genomes_project 2 129071324 129193141 + MGP_129S1SvImJ_P0057383 Galk2 protein_coding protein_coding MGP_129S1SvImJ_T0057384.1 MGP_129S1SvImJ_G0026435.1 mouse_genomes_project 2 129071338 129105773 + MGP_129S1SvImJ_P0057384 Galk2 protein_coding protein_coding MGP_129S1SvImJ_T0057385.1 MGP_129S1SvImJ_G0026435.1 mouse_genomes_project 2 129078281 129141213 + MGP_129S1SvImJ_P0057385 Galk2 protein_coding protein_coding MGP_129S1SvImJ_T0057386.1 MGP_129S1SvImJ_G0026435.1 mouse_genomes_project 2 129078281 129192429 + MGP_129S1SvImJ_P0057386 Galk2 protein_coding protein_coding MGP_129S1SvImJ_T0057387.1 MGP_129S1SvImJ_G0026435.1 mouse_genomes_project 2 129078417 129123134 + Galk2 protein_coding processed_transcript MGP_129S1SvImJ_T0057388.1 MGP_129S1SvImJ_G0026435.1 mouse_genomes_project 2 129078424 129108997 + MGP_129S1SvImJ_P0057388 Galk2 protein_coding protein_coding MGP_129S1SvImJ_T0057389.1 MGP_129S1SvImJ_G0026435.1 mouse_genomes_project 2 129078428 129141269 + MGP_129S1SvImJ_P0057389 Galk2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057390.1 MGP_129S1SvImJ_G0026435.1 mouse_genomes_project 2 129078442 129160056 + Galk2 protein_coding retained_intron MGP_129S1SvImJ_T0052457.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3719903 4613566 - MGP_129S1SvImJ_P0052457 Celf2 protein_coding protein_coding MGP_129S1SvImJ_T0052458.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3719914 4070329 - MGP_129S1SvImJ_P0052458 Celf2 protein_coding protein_coding MGP_129S1SvImJ_T0052459.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3719914 3909933 - MGP_129S1SvImJ_P0052459 Celf2 protein_coding protein_coding MGP_129S1SvImJ_T0052460.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3719914 4070329 - MGP_129S1SvImJ_P0052460 Celf2 protein_coding protein_coding MGP_129S1SvImJ_T0052461.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3722067 4070329 - MGP_129S1SvImJ_P0052461 Celf2 protein_coding protein_coding MGP_129S1SvImJ_T0052462.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3723628 4272225 - MGP_129S1SvImJ_P0052462 Celf2 protein_coding protein_coding MGP_129S1SvImJ_T0052463.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3725006 4070280 - MGP_129S1SvImJ_P0052463 Celf2 protein_coding protein_coding MGP_129S1SvImJ_T0052464.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3725040 4272165 - MGP_129S1SvImJ_P0052464 Celf2 protein_coding protein_coding MGP_129S1SvImJ_T0052465.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3725040 3909933 - MGP_129S1SvImJ_P0052465 Celf2 protein_coding protein_coding MGP_129S1SvImJ_T0052466.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3725834 3910246 - MGP_129S1SvImJ_P0052466 Celf2 protein_coding protein_coding MGP_129S1SvImJ_T0052467.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3726439 3909931 - MGP_129S1SvImJ_P0052467 Celf2 protein_coding protein_coding MGP_129S1SvImJ_T0052468.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3726439 3909931 - MGP_129S1SvImJ_P0052468 Celf2 protein_coding protein_coding MGP_129S1SvImJ_T0052469.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3726534 4070279 - MGP_129S1SvImJ_P0052469 Celf2 protein_coding protein_coding MGP_129S1SvImJ_T0052470.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3727466 4057932 - MGP_129S1SvImJ_P0052470 Celf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052471.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3727479 3775147 - Celf2 protein_coding processed_transcript MGP_129S1SvImJ_T0052472.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3734496 4613459 - MGP_129S1SvImJ_P0052472 Celf2 protein_coding protein_coding MGP_129S1SvImJ_T0052473.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3765919 3909933 - Celf2 protein_coding retained_intron MGP_129S1SvImJ_T0052474.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3787085 3799774 - Celf2 protein_coding processed_transcript MGP_129S1SvImJ_T0052475.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3790679 4069961 - Celf2 protein_coding processed_transcript MGP_129S1SvImJ_T0052476.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3799322 4613764 - MGP_129S1SvImJ_P0052476 Celf2 protein_coding protein_coding MGP_129S1SvImJ_T0052477.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3803832 4070225 - Celf2 protein_coding retained_intron MGP_129S1SvImJ_T0052478.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3807121 3910534 - Celf2 protein_coding retained_intron MGP_129S1SvImJ_T0052479.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3808297 4057307 - MGP_129S1SvImJ_P0052479 Celf2 protein_coding protein_coding MGP_129S1SvImJ_T0052480.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3846070 4070225 - Celf2 protein_coding retained_intron MGP_129S1SvImJ_T0052481.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3849780 4272130 - MGP_129S1SvImJ_P0052481 Celf2 protein_coding protein_coding MGP_129S1SvImJ_T0052482.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 3909773 3910527 - MGP_129S1SvImJ_P0052482 Celf2 protein_coding protein_coding MGP_129S1SvImJ_T0052483.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 4267495 4272236 - Celf2 protein_coding processed_transcript MGP_129S1SvImJ_T0052484.1 MGP_129S1SvImJ_G0025332.1 mouse_genomes_project 2 4611641 4714863 - Celf2 protein_coding processed_transcript MGP_129S1SvImJ_T0058118.1 MGP_129S1SvImJ_G0026601.1 mouse_genomes_project 2 151261803 151334485 + MGP_129S1SvImJ_P0058118 Xrn2 protein_coding protein_coding MGP_129S1SvImJ_T0058119.1 MGP_129S1SvImJ_G0026601.1 mouse_genomes_project 2 151285416 151294060 + Xrn2 protein_coding retained_intron MGP_129S1SvImJ_T0058120.1 MGP_129S1SvImJ_G0026601.1 mouse_genomes_project 2 151298318 151304350 + Xrn2 protein_coding retained_intron MGP_129S1SvImJ_T0058121.1 MGP_129S1SvImJ_G0026601.1 mouse_genomes_project 2 151318020 151325481 + Xrn2 protein_coding retained_intron MGP_129S1SvImJ_T0013609.1 MGP_129S1SvImJ_G0011698.1 mouse_genomes_project 2 73393197 73396341 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053583.1 MGP_129S1SvImJ_G0025530.1 mouse_genomes_project 2 26769352 26776859 - MGP_129S1SvImJ_P0053583 Spaca9 protein_coding protein_coding MGP_129S1SvImJ_T0053584.1 MGP_129S1SvImJ_G0025530.1 mouse_genomes_project 2 26769356 26776891 - MGP_129S1SvImJ_P0053584 Spaca9 protein_coding protein_coding MGP_129S1SvImJ_T0053585.1 MGP_129S1SvImJ_G0025530.1 mouse_genomes_project 2 26770284 26776935 - Spaca9 protein_coding processed_transcript MGP_129S1SvImJ_T0053586.1 MGP_129S1SvImJ_G0025530.1 mouse_genomes_project 2 26770974 26776882 - Spaca9 protein_coding processed_transcript MGP_129S1SvImJ_T0052887.1 MGP_129S1SvImJ_G0025400.1 mouse_genomes_project 2 21270937 21338538 - MGP_129S1SvImJ_P0052887 Spopl protein_coding protein_coding MGP_129S1SvImJ_T0052888.1 MGP_129S1SvImJ_G0025400.1 mouse_genomes_project 2 21275389 21338512 - MGP_129S1SvImJ_P0052888 Spopl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052889.1 MGP_129S1SvImJ_G0025400.1 mouse_genomes_project 2 21275987 21338412 - MGP_129S1SvImJ_P0052889 Spopl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052890.1 MGP_129S1SvImJ_G0025400.1 mouse_genomes_project 2 21276251 21279941 - Spopl protein_coding retained_intron MGP_129S1SvImJ_T0052891.1 MGP_129S1SvImJ_G0025400.1 mouse_genomes_project 2 21282520 21298544 - Spopl protein_coding retained_intron MGP_129S1SvImJ_T0052892.1 MGP_129S1SvImJ_G0025400.1 mouse_genomes_project 2 21304286 21338540 - MGP_129S1SvImJ_P0052892 Spopl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0100930.1 MGP_129S1SvImJ_G0038997.1 mouse_genomes_project 2 31465444 31465574 + Snora65 snoRNA snoRNA MGP_129S1SvImJ_T0011538.1 MGP_129S1SvImJ_G0009654.1 mouse_genomes_project 2 151585130 151585588 + Nkx2-2os misc_RNA misc_RNA MGP_129S1SvImJ_T0059713.1 MGP_129S1SvImJ_G0026993.1 mouse_genomes_project 2 186841150 186850715 - MGP_129S1SvImJ_P0059713 Gata5 protein_coding protein_coding MGP_129S1SvImJ_T0055852.1 MGP_129S1SvImJ_G0026047.1 mouse_genomes_project 2 89298158 89299085 - MGP_129S1SvImJ_P0055852 Olfr1170 protein_coding protein_coding MGP_129S1SvImJ_T0054508.1 MGP_129S1SvImJ_G0025691.1 mouse_genomes_project 2 36006865 36007849 + MGP_129S1SvImJ_P0054508 Olfr368 protein_coding protein_coding MGP_129S1SvImJ_T0013832.1 MGP_129S1SvImJ_G0011921.1 mouse_genomes_project 2 155395176 155395659 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055771.1 MGP_129S1SvImJ_G0025978.1 mouse_genomes_project 2 87641864 87642797 - MGP_129S1SvImJ_P0055771 Olfr1086 protein_coding protein_coding MGP_129S1SvImJ_T0052408.1 MGP_129S1SvImJ_G0025322.1 mouse_genomes_project 2 2408928 2836855 - MGP_129S1SvImJ_P0052408 Camk1d protein_coding protein_coding MGP_129S1SvImJ_T0052409.1 MGP_129S1SvImJ_G0025322.1 mouse_genomes_project 2 2414356 2803010 - MGP_129S1SvImJ_P0052409 Camk1d protein_coding protein_coding MGP_129S1SvImJ_T0052410.1 MGP_129S1SvImJ_G0025322.1 mouse_genomes_project 2 2558724 2803364 - Camk1d protein_coding processed_transcript MGP_129S1SvImJ_T0052411.1 MGP_129S1SvImJ_G0025322.1 mouse_genomes_project 2 2681942 2836843 - Camk1d protein_coding processed_transcript MGP_129S1SvImJ_T0013677.1 MGP_129S1SvImJ_G0011766.1 mouse_genomes_project 2 93655645 93655978 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013620.1 MGP_129S1SvImJ_G0011709.1 mouse_genomes_project 2 77720949 77721901 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013672.1 MGP_129S1SvImJ_G0011761.1 mouse_genomes_project 2 92331353 92331698 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0052777.1 MGP_129S1SvImJ_G0025379.1 mouse_genomes_project 2 16723502 16724981 + MGP_129S1SvImJ_P0052777 4930426L09Rik protein_coding protein_coding MGP_129S1SvImJ_T0055848.1 MGP_129S1SvImJ_G0026043.1 mouse_genomes_project 2 89126588 89127539 - MGP_129S1SvImJ_P0055848 Olfr1163 protein_coding protein_coding MGP_129S1SvImJ_T0100991.1 MGP_129S1SvImJ_G0039058.1 mouse_genomes_project 2 163432606 163432738 - Gm23925 snoRNA snoRNA MGP_129S1SvImJ_T0053549.1 MGP_129S1SvImJ_G0025525.1 mouse_genomes_project 2 26570361 26604682 + MGP_129S1SvImJ_P0053549 Ralgds protein_coding protein_coding MGP_129S1SvImJ_T0053550.1 MGP_129S1SvImJ_G0025525.1 mouse_genomes_project 2 26570562 26614811 + MGP_129S1SvImJ_P0053550 Ralgds protein_coding protein_coding MGP_129S1SvImJ_T0053551.1 MGP_129S1SvImJ_G0025525.1 mouse_genomes_project 2 26590598 26614796 + MGP_129S1SvImJ_P0053551 Ralgds protein_coding protein_coding MGP_129S1SvImJ_T0053552.1 MGP_129S1SvImJ_G0025525.1 mouse_genomes_project 2 26590785 26614366 + MGP_129S1SvImJ_P0053552 Ralgds protein_coding protein_coding MGP_129S1SvImJ_T0053553.1 MGP_129S1SvImJ_G0025525.1 mouse_genomes_project 2 26590792 26614800 + Ralgds protein_coding retained_intron MGP_129S1SvImJ_T0053554.1 MGP_129S1SvImJ_G0025525.1 mouse_genomes_project 2 26597949 26604634 + Ralgds protein_coding retained_intron MGP_129S1SvImJ_T0053555.1 MGP_129S1SvImJ_G0025525.1 mouse_genomes_project 2 26604064 26606806 + MGP_129S1SvImJ_P0053555 Ralgds protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053556.1 MGP_129S1SvImJ_G0025525.1 mouse_genomes_project 2 26607022 26608950 + Ralgds protein_coding retained_intron MGP_129S1SvImJ_T0053557.1 MGP_129S1SvImJ_G0025525.1 mouse_genomes_project 2 26609279 26610706 + Ralgds protein_coding retained_intron MGP_129S1SvImJ_T0053558.1 MGP_129S1SvImJ_G0025525.1 mouse_genomes_project 2 26610787 26614055 + MGP_129S1SvImJ_P0053558 Ralgds protein_coding protein_coding MGP_129S1SvImJ_T0007366.1 MGP_129S1SvImJ_G0006042.1 mouse_genomes_project 2 155893493 155906259 - lincRNA lincRNA MGP_129S1SvImJ_T0001100.1 MGP_129S1SvImJ_G0001029.1 mouse_genomes_project 2 37993301 37996781 - TEC TEC MGP_129S1SvImJ_T0099688.1 MGP_129S1SvImJ_G0037755.1 mouse_genomes_project 2 115764701 115764867 + Gm26505 snRNA snRNA MGP_129S1SvImJ_T0099669.1 MGP_129S1SvImJ_G0037736.1 mouse_genomes_project 2 37234806 37234914 + Gm25081 snRNA snRNA MGP_129S1SvImJ_T0054818.1 MGP_129S1SvImJ_G0025744.1 mouse_genomes_project 2 56732183 56866775 + Gpd2 protein_coding processed_transcript MGP_129S1SvImJ_T0054819.1 MGP_129S1SvImJ_G0025744.1 mouse_genomes_project 2 56732226 56869640 + MGP_129S1SvImJ_P0054819 Gpd2 protein_coding protein_coding MGP_129S1SvImJ_T0054820.1 MGP_129S1SvImJ_G0025744.1 mouse_genomes_project 2 56732845 56869640 + MGP_129S1SvImJ_P0054820 Gpd2 protein_coding protein_coding MGP_129S1SvImJ_T0054821.1 MGP_129S1SvImJ_G0025744.1 mouse_genomes_project 2 56732930 56869640 + MGP_129S1SvImJ_P0054821 Gpd2 protein_coding protein_coding MGP_129S1SvImJ_T0054822.1 MGP_129S1SvImJ_G0025744.1 mouse_genomes_project 2 56739049 56802924 + Gpd2 protein_coding processed_transcript MGP_129S1SvImJ_T0054823.1 MGP_129S1SvImJ_G0025744.1 mouse_genomes_project 2 56760274 56763248 + Gpd2 protein_coding processed_transcript MGP_129S1SvImJ_T0054824.1 MGP_129S1SvImJ_G0025744.1 mouse_genomes_project 2 56762517 56763248 + Gpd2 protein_coding processed_transcript MGP_129S1SvImJ_T0055533.1 MGP_129S1SvImJ_G0025879.1 mouse_genomes_project 2 80191666 80230530 + MGP_129S1SvImJ_P0055533 Ssfa2 protein_coding protein_coding MGP_129S1SvImJ_T0055534.1 MGP_129S1SvImJ_G0025879.1 mouse_genomes_project 2 80191740 80230530 + MGP_129S1SvImJ_P0055534 Ssfa2 protein_coding protein_coding MGP_129S1SvImJ_T0055535.1 MGP_129S1SvImJ_G0025879.1 mouse_genomes_project 2 80191769 80230530 + MGP_129S1SvImJ_P0055535 Ssfa2 protein_coding protein_coding MGP_129S1SvImJ_T0055536.1 MGP_129S1SvImJ_G0025879.1 mouse_genomes_project 2 80191775 80192760 + Ssfa2 protein_coding processed_transcript MGP_129S1SvImJ_T0055537.1 MGP_129S1SvImJ_G0025879.1 mouse_genomes_project 2 80195507 80230530 + Ssfa2 protein_coding processed_transcript MGP_129S1SvImJ_T0057241.1 MGP_129S1SvImJ_G0026399.1 mouse_genomes_project 2 124475779 124765541 - MGP_129S1SvImJ_P0057241 Frmd5 protein_coding protein_coding MGP_129S1SvImJ_T0057242.1 MGP_129S1SvImJ_G0026399.1 mouse_genomes_project 2 124475779 124521082 - MGP_129S1SvImJ_P0057242 Frmd5 protein_coding protein_coding MGP_129S1SvImJ_T0057243.1 MGP_129S1SvImJ_G0026399.1 mouse_genomes_project 2 124475779 124714974 - MGP_129S1SvImJ_P0057243 Frmd5 protein_coding protein_coding MGP_129S1SvImJ_T0057244.1 MGP_129S1SvImJ_G0026399.1 mouse_genomes_project 2 124477988 124486917 - MGP_129S1SvImJ_P0057244 Frmd5 protein_coding protein_coding MGP_129S1SvImJ_T0057245.1 MGP_129S1SvImJ_G0026399.1 mouse_genomes_project 2 124478546 124714974 - MGP_129S1SvImJ_P0057245 Frmd5 protein_coding protein_coding MGP_129S1SvImJ_T0057246.1 MGP_129S1SvImJ_G0026399.1 mouse_genomes_project 2 124478548 124765477 - MGP_129S1SvImJ_P0057246 Frmd5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057247.1 MGP_129S1SvImJ_G0026399.1 mouse_genomes_project 2 124478549 124765446 - MGP_129S1SvImJ_P0057247 Frmd5 protein_coding protein_coding MGP_129S1SvImJ_T0057248.1 MGP_129S1SvImJ_G0026399.1 mouse_genomes_project 2 124478897 124765285 - MGP_129S1SvImJ_P0057248 Frmd5 protein_coding protein_coding MGP_129S1SvImJ_T0057249.1 MGP_129S1SvImJ_G0026399.1 mouse_genomes_project 2 124479290 124489888 - Frmd5 protein_coding processed_transcript MGP_129S1SvImJ_T0057250.1 MGP_129S1SvImJ_G0026399.1 mouse_genomes_project 2 124492510 124765511 - Frmd5 protein_coding retained_intron MGP_129S1SvImJ_T0057251.1 MGP_129S1SvImJ_G0026399.1 mouse_genomes_project 2 124500074 124765326 - MGP_129S1SvImJ_P0057251 Frmd5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057252.1 MGP_129S1SvImJ_G0026399.1 mouse_genomes_project 2 124500126 124518654 - Frmd5 protein_coding processed_transcript MGP_129S1SvImJ_T0055631.1 MGP_129S1SvImJ_G0025901.1 mouse_genomes_project 2 85283340 85359657 - MGP_129S1SvImJ_P0055631 protein_coding protein_coding MGP_129S1SvImJ_T0017950.1 MGP_129S1SvImJ_G0015491.1 mouse_genomes_project 2 173294703 173358164 + Gm11476 processed_transcript processed_transcript MGP_129S1SvImJ_T0010423.1 MGP_129S1SvImJ_G0008539.1 mouse_genomes_project 2 36401020 36401104 - Mir5128 miRNA miRNA MGP_129S1SvImJ_T0004057.1 MGP_129S1SvImJ_G0003606.1 mouse_genomes_project 2 103947242 103951036 + Gm13920 antisense antisense MGP_129S1SvImJ_T0058178.1 MGP_129S1SvImJ_G0026627.1 mouse_genomes_project 2 155031418 155056896 - MGP_129S1SvImJ_P0058178 Apmap protein_coding protein_coding MGP_129S1SvImJ_T0058179.1 MGP_129S1SvImJ_G0026627.1 mouse_genomes_project 2 155035459 155048583 - Apmap protein_coding processed_transcript MGP_129S1SvImJ_T0058180.1 MGP_129S1SvImJ_G0026627.1 mouse_genomes_project 2 155042702 155056873 - Apmap protein_coding processed_transcript MGP_129S1SvImJ_T0013754.1 MGP_129S1SvImJ_G0011843.1 mouse_genomes_project 2 124302495 124302728 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058309.1 MGP_129S1SvImJ_G0026662.1 mouse_genomes_project 2 157038791 157041661 + MGP_129S1SvImJ_P0058309 Defb20 protein_coding protein_coding MGP_129S1SvImJ_T0056086.1 MGP_129S1SvImJ_G0026145.1 mouse_genomes_project 2 92511980 92519422 + MGP_129S1SvImJ_P0056086 Acp2 protein_coding protein_coding MGP_129S1SvImJ_T0056087.1 MGP_129S1SvImJ_G0026145.1 mouse_genomes_project 2 92512004 92525056 + MGP_129S1SvImJ_P0056087 Acp2 protein_coding protein_coding MGP_129S1SvImJ_T0056088.1 MGP_129S1SvImJ_G0026145.1 mouse_genomes_project 2 92512019 92523100 + Acp2 protein_coding retained_intron MGP_129S1SvImJ_T0056089.1 MGP_129S1SvImJ_G0026145.1 mouse_genomes_project 2 92512019 92515137 + MGP_129S1SvImJ_P0056089 Acp2 protein_coding protein_coding MGP_129S1SvImJ_T0056090.1 MGP_129S1SvImJ_G0026145.1 mouse_genomes_project 2 92512023 92512748 + Acp2 protein_coding processed_transcript MGP_129S1SvImJ_T0013565.1 MGP_129S1SvImJ_G0011654.1 mouse_genomes_project 2 58300667 58301530 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055814.1 MGP_129S1SvImJ_G0026012.1 mouse_genomes_project 2 88604772 88605811 - MGP_129S1SvImJ_P0055814 protein_coding protein_coding MGP_129S1SvImJ_T0010412.1 MGP_129S1SvImJ_G0008528.1 mouse_genomes_project 2 29966276 29966340 + Mir6998 miRNA miRNA MGP_129S1SvImJ_T0003979.1 MGP_129S1SvImJ_G0003551.1 mouse_genomes_project 2 32864867 32884768 + C79798 antisense antisense MGP_129S1SvImJ_T0013442.1 MGP_129S1SvImJ_G0011531.1 mouse_genomes_project 2 12214412 12219980 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055799.1 MGP_129S1SvImJ_G0026005.1 mouse_genomes_project 2 88402614 88403559 + MGP_129S1SvImJ_P0055799 Olfr1121 protein_coding protein_coding MGP_129S1SvImJ_T0055638.1 MGP_129S1SvImJ_G0025902.1 mouse_genomes_project 2 85341611 85343999 + protein_coding processed_transcript MGP_129S1SvImJ_T0053542.1 MGP_129S1SvImJ_G0025522.1 mouse_genomes_project 2 26527664 26530779 + MGP_129S1SvImJ_P0053542 Mrps2 protein_coding protein_coding MGP_129S1SvImJ_T0053543.1 MGP_129S1SvImJ_G0025522.1 mouse_genomes_project 2 26527680 26530766 + Mrps2 protein_coding processed_transcript MGP_129S1SvImJ_T0053544.1 MGP_129S1SvImJ_G0025522.1 mouse_genomes_project 2 26527688 26530766 + Mrps2 protein_coding processed_transcript MGP_129S1SvImJ_T0007265.1 MGP_129S1SvImJ_G0005961.1 mouse_genomes_project 2 93443935 93504664 - lincRNA lincRNA MGP_129S1SvImJ_T0013828.1 MGP_129S1SvImJ_G0011917.1 mouse_genomes_project 2 154508841 154509836 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059019.1 MGP_129S1SvImJ_G0026814.1 mouse_genomes_project 2 168222628 168256291 + L3mbtl1 protein_coding retained_intron MGP_129S1SvImJ_T0059020.1 MGP_129S1SvImJ_G0026814.1 mouse_genomes_project 2 168222630 168258772 + MGP_129S1SvImJ_P0059020 L3mbtl1 protein_coding protein_coding MGP_129S1SvImJ_T0059021.1 MGP_129S1SvImJ_G0026814.1 mouse_genomes_project 2 168222631 168230364 + L3mbtl1 protein_coding processed_transcript MGP_129S1SvImJ_T0059022.1 MGP_129S1SvImJ_G0026814.1 mouse_genomes_project 2 168222631 168230439 + MGP_129S1SvImJ_P0059022 L3mbtl1 protein_coding protein_coding MGP_129S1SvImJ_T0059023.1 MGP_129S1SvImJ_G0026814.1 mouse_genomes_project 2 168222656 168228722 + L3mbtl1 protein_coding processed_transcript MGP_129S1SvImJ_T0059024.1 MGP_129S1SvImJ_G0026814.1 mouse_genomes_project 2 168229481 168231017 + L3mbtl1 protein_coding processed_transcript MGP_129S1SvImJ_T0059025.1 MGP_129S1SvImJ_G0026814.1 mouse_genomes_project 2 168229481 168231017 + MGP_129S1SvImJ_P0059025 L3mbtl1 protein_coding protein_coding MGP_129S1SvImJ_T0017764.1 MGP_129S1SvImJ_G0015394.1 mouse_genomes_project 2 11576978 11580581 - Stamos processed_transcript antisense MGP_129S1SvImJ_T0017765.1 MGP_129S1SvImJ_G0015394.1 mouse_genomes_project 2 11579134 11580495 - Stamos processed_transcript retained_intron MGP_129S1SvImJ_T0013775.1 MGP_129S1SvImJ_G0011864.1 mouse_genomes_project 2 134481074 134482278 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053518.1 MGP_129S1SvImJ_G0025516.1 mouse_genomes_project 2 25674175 25740893 + MGP_129S1SvImJ_P0053518 Rxra protein_coding protein_coding MGP_129S1SvImJ_T0053519.1 MGP_129S1SvImJ_G0025516.1 mouse_genomes_project 2 25706627 25759180 + MGP_129S1SvImJ_P0053519 Rxra protein_coding protein_coding MGP_129S1SvImJ_T0053520.1 MGP_129S1SvImJ_G0025516.1 mouse_genomes_project 2 25707918 25759180 + MGP_129S1SvImJ_P0053520 Rxra protein_coding protein_coding MGP_129S1SvImJ_T0053521.1 MGP_129S1SvImJ_G0025516.1 mouse_genomes_project 2 25736293 25761956 + MGP_129S1SvImJ_P0053521 Rxra protein_coding protein_coding MGP_129S1SvImJ_T0053522.1 MGP_129S1SvImJ_G0025516.1 mouse_genomes_project 2 25736293 25760414 + MGP_129S1SvImJ_P0053522 Rxra protein_coding protein_coding MGP_129S1SvImJ_T0053523.1 MGP_129S1SvImJ_G0025516.1 mouse_genomes_project 2 25739195 25747668 + Rxra protein_coding processed_transcript MGP_129S1SvImJ_T0007331.1 MGP_129S1SvImJ_G0006013.1 mouse_genomes_project 2 131560515 131562466 - Gm14012 lincRNA lincRNA MGP_129S1SvImJ_T0055310.1 MGP_129S1SvImJ_G0025832.1 mouse_genomes_project 2 73207800 73225059 - MGP_129S1SvImJ_P0055310 Gm11084 protein_coding protein_coding MGP_129S1SvImJ_T0010437.1 MGP_129S1SvImJ_G0008553.1 mouse_genomes_project 2 75015181 75015318 - Gm44463 miRNA miRNA MGP_129S1SvImJ_T0055740.1 MGP_129S1SvImJ_G0025948.1 mouse_genomes_project 2 86769748 86770705 + MGP_129S1SvImJ_P0055740 Olfr1030 protein_coding protein_coding MGP_129S1SvImJ_T0055746.1 MGP_129S1SvImJ_G0025954.1 mouse_genomes_project 2 86958729 86959689 - MGP_129S1SvImJ_P0055746 Olfr1039 protein_coding protein_coding MGP_129S1SvImJ_T0004048.1 MGP_129S1SvImJ_G0003600.1 mouse_genomes_project 2 85871701 85884738 + Gm13713 antisense antisense MGP_129S1SvImJ_T0004049.1 MGP_129S1SvImJ_G0003600.1 mouse_genomes_project 2 85871701 85903992 + Gm13713 antisense antisense MGP_129S1SvImJ_T0007337.1 MGP_129S1SvImJ_G0006017.1 mouse_genomes_project 2 136076843 136094753 - Gm14095 lincRNA lincRNA MGP_129S1SvImJ_T0055088.1 MGP_129S1SvImJ_G0025790.1 mouse_genomes_project 2 68105697 68390580 - MGP_129S1SvImJ_P0055088 Stk39 protein_coding protein_coding MGP_129S1SvImJ_T0055089.1 MGP_129S1SvImJ_G0025790.1 mouse_genomes_project 2 68105700 68270620 - Stk39 protein_coding retained_intron MGP_129S1SvImJ_T0055090.1 MGP_129S1SvImJ_G0025790.1 mouse_genomes_project 2 68106992 68119748 - Stk39 protein_coding processed_transcript MGP_129S1SvImJ_T0055091.1 MGP_129S1SvImJ_G0025790.1 mouse_genomes_project 2 68106992 68148530 - Stk39 protein_coding processed_transcript MGP_129S1SvImJ_T0055092.1 MGP_129S1SvImJ_G0025790.1 mouse_genomes_project 2 68106992 68148535 - Stk39 protein_coding processed_transcript MGP_129S1SvImJ_T0055093.1 MGP_129S1SvImJ_G0025790.1 mouse_genomes_project 2 68106999 68148508 - Stk39 protein_coding processed_transcript MGP_129S1SvImJ_T0055094.1 MGP_129S1SvImJ_G0025790.1 mouse_genomes_project 2 68162358 68390252 - Stk39 protein_coding retained_intron MGP_129S1SvImJ_T0055095.1 MGP_129S1SvImJ_G0025790.1 mouse_genomes_project 2 68261430 68292329 - Stk39 protein_coding processed_transcript MGP_129S1SvImJ_T0100949.1 MGP_129S1SvImJ_G0039016.1 mouse_genomes_project 2 81311393 81311520 + Gm25420 snoRNA snoRNA MGP_129S1SvImJ_T0013710.1 MGP_129S1SvImJ_G0011799.1 mouse_genomes_project 2 105894226 105894487 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057307.1 MGP_129S1SvImJ_G0026417.1 mouse_genomes_project 2 125624832 125641413 - MGP_129S1SvImJ_P0057307 Gatm protein_coding protein_coding MGP_129S1SvImJ_T0057308.1 MGP_129S1SvImJ_G0026417.1 mouse_genomes_project 2 125625803 125628825 - Gatm protein_coding processed_transcript MGP_129S1SvImJ_T0057309.1 MGP_129S1SvImJ_G0026417.1 mouse_genomes_project 2 125625920 125629103 - Gatm protein_coding retained_intron MGP_129S1SvImJ_T0013814.1 MGP_129S1SvImJ_G0011903.1 mouse_genomes_project 2 149835587 149835897 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055859.1 MGP_129S1SvImJ_G0026054.1 mouse_genomes_project 2 89552259 89553201 - MGP_129S1SvImJ_P0055859 protein_coding protein_coding MGP_129S1SvImJ_T0001084.1 MGP_129S1SvImJ_G0001013.1 mouse_genomes_project 2 31503865 31507639 - TEC TEC MGP_129S1SvImJ_T0056633.1 MGP_129S1SvImJ_G0026249.1 mouse_genomes_project 2 113471142 113491864 - MGP_129S1SvImJ_P0056633 Gm13941 protein_coding protein_coding MGP_129S1SvImJ_T0058122.1 MGP_129S1SvImJ_G0026602.1 mouse_genomes_project 2 151339800 151341930 - MGP_129S1SvImJ_P0058122 Nkx2-4 protein_coding protein_coding MGP_129S1SvImJ_T0058845.1 MGP_129S1SvImJ_G0026778.1 mouse_genomes_project 2 162190942 162274819 - MGP_129S1SvImJ_P0058845 Mroh8 protein_coding protein_coding MGP_129S1SvImJ_T0058846.1 MGP_129S1SvImJ_G0026778.1 mouse_genomes_project 2 162206514 162207928 - Mroh8 protein_coding processed_transcript MGP_129S1SvImJ_T0058847.1 MGP_129S1SvImJ_G0026778.1 mouse_genomes_project 2 162231359 162274559 - Mroh8 protein_coding processed_transcript MGP_129S1SvImJ_T0058848.1 MGP_129S1SvImJ_G0026778.1 mouse_genomes_project 2 162247303 162249706 - Mroh8 protein_coding processed_transcript MGP_129S1SvImJ_T0058849.1 MGP_129S1SvImJ_G0026778.1 mouse_genomes_project 2 162258016 162274819 - Mroh8 protein_coding processed_transcript MGP_129S1SvImJ_T0010477.1 MGP_129S1SvImJ_G0008593.1 mouse_genomes_project 2 134806486 134806572 + Mir103-2 miRNA miRNA MGP_129S1SvImJ_T0059425.1 MGP_129S1SvImJ_G0026915.1 mouse_genomes_project 2 173277824 173284225 + MGP_129S1SvImJ_P0059425 Snai1 protein_coding protein_coding MGP_129S1SvImJ_T0057503.1 MGP_129S1SvImJ_G0026461.1 mouse_genomes_project 2 130749536 130814154 - MGP_129S1SvImJ_P0057503 Kcnip3 protein_coding protein_coding MGP_129S1SvImJ_T0057504.1 MGP_129S1SvImJ_G0026461.1 mouse_genomes_project 2 130749536 130814154 - MGP_129S1SvImJ_P0057504 Kcnip3 protein_coding protein_coding MGP_129S1SvImJ_T0057505.1 MGP_129S1SvImJ_G0026461.1 mouse_genomes_project 2 130751166 130775249 - MGP_129S1SvImJ_P0057505 Kcnip3 protein_coding protein_coding MGP_129S1SvImJ_T0057506.1 MGP_129S1SvImJ_G0026461.1 mouse_genomes_project 2 130751268 130814878 - Kcnip3 protein_coding processed_transcript MGP_129S1SvImJ_T0057525.1 MGP_129S1SvImJ_G0026467.1 mouse_genomes_project 2 131027066 131079475 - MGP_129S1SvImJ_P0057525 Nphp1 protein_coding protein_coding MGP_129S1SvImJ_T0057526.1 MGP_129S1SvImJ_G0026467.1 mouse_genomes_project 2 131027068 131030860 - Nphp1 protein_coding processed_transcript MGP_129S1SvImJ_T0057527.1 MGP_129S1SvImJ_G0026467.1 mouse_genomes_project 2 131027070 131079518 - MGP_129S1SvImJ_P0057527 Nphp1 protein_coding protein_coding MGP_129S1SvImJ_T0057528.1 MGP_129S1SvImJ_G0026467.1 mouse_genomes_project 2 131031935 131040156 - Nphp1 protein_coding retained_intron MGP_129S1SvImJ_T0017814.1 MGP_129S1SvImJ_G0015423.1 mouse_genomes_project 2 66263332 66275295 + Gm13630 processed_transcript processed_transcript MGP_129S1SvImJ_T0017960.1 MGP_129S1SvImJ_G0015497.1 mouse_genomes_project 2 186466393 186468544 + 4921531C22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017961.1 MGP_129S1SvImJ_G0015497.1 mouse_genomes_project 2 186466980 186467518 + 4921531C22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0013634.1 MGP_129S1SvImJ_G0011723.1 mouse_genomes_project 2 81462272 81463400 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013676.1 MGP_129S1SvImJ_G0011765.1 mouse_genomes_project 2 93079528 93080789 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057584.1 MGP_129S1SvImJ_G0026484.1 mouse_genomes_project 2 132505939 132510370 + MGP_129S1SvImJ_P0057584 Chchd5 protein_coding protein_coding MGP_129S1SvImJ_T0057585.1 MGP_129S1SvImJ_G0026484.1 mouse_genomes_project 2 132506043 132510249 + Chchd5 protein_coding processed_transcript MGP_129S1SvImJ_T0057586.1 MGP_129S1SvImJ_G0026484.1 mouse_genomes_project 2 132506089 132509716 + Chchd5 protein_coding retained_intron MGP_129S1SvImJ_T0098561.1 MGP_129S1SvImJ_G0036646.1 mouse_genomes_project 2 82160320 82160428 - Gm23900 rRNA rRNA MGP_129S1SvImJ_T0056538.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107842530 107872876 + MGP_129S1SvImJ_P0056538 Pax6 protein_coding protein_coding MGP_129S1SvImJ_T0056539.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107842530 107872876 + MGP_129S1SvImJ_P0056539 Pax6 protein_coding protein_coding MGP_129S1SvImJ_T0056540.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107842550 107871974 + Pax6 protein_coding processed_transcript MGP_129S1SvImJ_T0056541.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107842565 107857363 + MGP_129S1SvImJ_P0056541 Pax6 protein_coding protein_coding MGP_129S1SvImJ_T0056542.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107845492 107872754 + MGP_129S1SvImJ_P0056542 Pax6 protein_coding protein_coding MGP_129S1SvImJ_T0056543.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107847504 107849410 + Pax6 protein_coding processed_transcript MGP_129S1SvImJ_T0056544.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107848642 107849508 + Pax6 protein_coding processed_transcript MGP_129S1SvImJ_T0056545.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107848724 107849356 + Pax6 protein_coding retained_intron MGP_129S1SvImJ_T0056546.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107848724 107872754 + MGP_129S1SvImJ_P0056546 Pax6 protein_coding protein_coding MGP_129S1SvImJ_T0056547.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107848966 107872856 + MGP_129S1SvImJ_P0056547 Pax6 protein_coding protein_coding MGP_129S1SvImJ_T0056548.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107849046 107872873 + MGP_129S1SvImJ_P0056548 Pax6 protein_coding protein_coding MGP_129S1SvImJ_T0056549.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107849060 107872583 + MGP_129S1SvImJ_P0056549 Pax6 protein_coding protein_coding MGP_129S1SvImJ_T0056550.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107849663 107872583 + MGP_129S1SvImJ_P0056550 Pax6 protein_coding protein_coding MGP_129S1SvImJ_T0056551.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107849664 107872873 + MGP_129S1SvImJ_P0056551 Pax6 protein_coding protein_coding MGP_129S1SvImJ_T0056552.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107851917 107859288 + MGP_129S1SvImJ_P0056552 Pax6 protein_coding protein_coding MGP_129S1SvImJ_T0056553.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107853395 107867738 + Pax6 protein_coding processed_transcript MGP_129S1SvImJ_T0056554.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107855240 107858475 + Pax6 protein_coding retained_intron MGP_129S1SvImJ_T0056555.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107855991 107867749 + Pax6 protein_coding processed_transcript MGP_129S1SvImJ_T0056556.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107856036 107867781 + Pax6 protein_coding processed_transcript MGP_129S1SvImJ_T0056557.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107856063 107871865 + Pax6 protein_coding retained_intron MGP_129S1SvImJ_T0056558.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107856065 107867241 + Pax6 protein_coding processed_transcript MGP_129S1SvImJ_T0056559.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107856075 107867759 + Pax6 protein_coding processed_transcript MGP_129S1SvImJ_T0056560.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107856165 107867212 + Pax6 protein_coding processed_transcript MGP_129S1SvImJ_T0056561.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107857246 107858436 + Pax6 protein_coding retained_intron MGP_129S1SvImJ_T0056562.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107858814 107872876 + Pax6 protein_coding processed_transcript MGP_129S1SvImJ_T0056563.1 MGP_129S1SvImJ_G0026230.1 mouse_genomes_project 2 107867998 107868641 + Pax6 protein_coding retained_intron MGP_129S1SvImJ_T0017797.1 MGP_129S1SvImJ_G0015413.1 mouse_genomes_project 2 33529578 33532759 + Gm13448 processed_transcript processed_transcript MGP_129S1SvImJ_T0098862.1 MGP_129S1SvImJ_G0036941.1 mouse_genomes_project 2 139402056 139403029 + Gm14209 sense_intronic sense_intronic MGP_129S1SvImJ_T0059690.1 MGP_129S1SvImJ_G0026988.1 mouse_genomes_project 2 186676030 186682656 + MGP_129S1SvImJ_P0059690 Adrm1 protein_coding protein_coding MGP_129S1SvImJ_T0059691.1 MGP_129S1SvImJ_G0026988.1 mouse_genomes_project 2 186676140 186676984 + Adrm1 protein_coding retained_intron MGP_129S1SvImJ_T0059692.1 MGP_129S1SvImJ_G0026988.1 mouse_genomes_project 2 186676151 186682654 + Adrm1 protein_coding retained_intron MGP_129S1SvImJ_T0059693.1 MGP_129S1SvImJ_G0026988.1 mouse_genomes_project 2 186676151 186677826 + Adrm1 protein_coding retained_intron MGP_129S1SvImJ_T0059694.1 MGP_129S1SvImJ_G0026988.1 mouse_genomes_project 2 186676159 186682505 + Adrm1 protein_coding retained_intron MGP_129S1SvImJ_T0059695.1 MGP_129S1SvImJ_G0026988.1 mouse_genomes_project 2 186676204 186682656 + Adrm1 protein_coding processed_transcript MGP_129S1SvImJ_T0059696.1 MGP_129S1SvImJ_G0026988.1 mouse_genomes_project 2 186676698 186682654 + Adrm1 protein_coding retained_intron MGP_129S1SvImJ_T0059697.1 MGP_129S1SvImJ_G0026988.1 mouse_genomes_project 2 186677511 186682657 + MGP_129S1SvImJ_P0059697 Adrm1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0059698.1 MGP_129S1SvImJ_G0026988.1 mouse_genomes_project 2 186679899 186682652 + Adrm1 protein_coding retained_intron MGP_129S1SvImJ_T0004160.1 MGP_129S1SvImJ_G0003680.1 mouse_genomes_project 2 163119776 163142617 - 2010009K17Rik antisense antisense MGP_129S1SvImJ_T0001045.1 MGP_129S1SvImJ_G0000974.1 mouse_genomes_project 2 4129514 4139742 + TEC TEC MGP_129S1SvImJ_T0055747.1 MGP_129S1SvImJ_G0025955.1 mouse_genomes_project 2 86975944 86976886 - MGP_129S1SvImJ_P0055747 Olfr1040 protein_coding protein_coding MGP_129S1SvImJ_T0007303.1 MGP_129S1SvImJ_G0005992.1 mouse_genomes_project 2 117870727 117886825 - 4930528P14Rik lincRNA lincRNA MGP_129S1SvImJ_T0052893.1 MGP_129S1SvImJ_G0025401.1 mouse_genomes_project 2 21779430 21827721 - MGP_129S1SvImJ_P0052893 Hnmt protein_coding protein_coding MGP_129S1SvImJ_T0052894.1 MGP_129S1SvImJ_G0025401.1 mouse_genomes_project 2 21780019 21827508 - MGP_129S1SvImJ_P0052894 Hnmt protein_coding protein_coding MGP_129S1SvImJ_T0013628.1 MGP_129S1SvImJ_G0011717.1 mouse_genomes_project 2 79686045 79686608 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053252.1 MGP_129S1SvImJ_G0025469.1 mouse_genomes_project 2 23690433 23692964 + MGP_129S1SvImJ_P0053252 Lcn3 protein_coding protein_coding MGP_129S1SvImJ_T0058913.1 MGP_129S1SvImJ_G0026792.1 mouse_genomes_project 2 163374166 163389988 + Lbp protein_coding processed_transcript MGP_129S1SvImJ_T0058914.1 MGP_129S1SvImJ_G0026792.1 mouse_genomes_project 2 163374166 163378195 + MGP_129S1SvImJ_P0058914 Lbp protein_coding protein_coding MGP_129S1SvImJ_T0058915.1 MGP_129S1SvImJ_G0026792.1 mouse_genomes_project 2 163374166 163403445 + MGP_129S1SvImJ_P0058915 Lbp protein_coding protein_coding MGP_129S1SvImJ_T0058916.1 MGP_129S1SvImJ_G0026792.1 mouse_genomes_project 2 163374285 163387647 + Lbp protein_coding retained_intron MGP_129S1SvImJ_T0058917.1 MGP_129S1SvImJ_G0026792.1 mouse_genomes_project 2 163382058 163393671 + MGP_129S1SvImJ_P0058917 Lbp protein_coding protein_coding MGP_129S1SvImJ_T0010364.1 MGP_129S1SvImJ_G0008480.1 mouse_genomes_project 2 7833600 7833724 + Gm26073 miRNA miRNA MGP_129S1SvImJ_T0099681.1 MGP_129S1SvImJ_G0037748.1 mouse_genomes_project 2 81145663 81145766 + Gm24461 snRNA snRNA MGP_129S1SvImJ_T0013771.1 MGP_129S1SvImJ_G0011860.1 mouse_genomes_project 2 133520613 133521933 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007403.1 MGP_129S1SvImJ_G0006075.1 mouse_genomes_project 2 172801189 172804220 - lincRNA lincRNA MGP_129S1SvImJ_T0007404.1 MGP_129S1SvImJ_G0006075.1 mouse_genomes_project 2 172802080 172803566 - lincRNA lincRNA MGP_129S1SvImJ_T0007401.1 MGP_129S1SvImJ_G0006073.1 mouse_genomes_project 2 172101404 172113993 + 5031425F14Rik lincRNA lincRNA MGP_129S1SvImJ_T0099672.1 MGP_129S1SvImJ_G0037739.1 mouse_genomes_project 2 47538903 47539023 - Gm25338 snRNA snRNA MGP_129S1SvImJ_T0017939.1 MGP_129S1SvImJ_G0015485.1 mouse_genomes_project 2 163675575 163694636 - Gm14204 processed_transcript processed_transcript MGP_129S1SvImJ_T0017940.1 MGP_129S1SvImJ_G0015485.1 mouse_genomes_project 2 163678276 163694700 - Gm14204 processed_transcript processed_transcript MGP_129S1SvImJ_T0017941.1 MGP_129S1SvImJ_G0015485.1 mouse_genomes_project 2 163684352 163694583 - Gm14204 processed_transcript processed_transcript MGP_129S1SvImJ_T0017942.1 MGP_129S1SvImJ_G0015485.1 mouse_genomes_project 2 163684491 163694567 - Gm14204 processed_transcript processed_transcript MGP_129S1SvImJ_T0017900.1 MGP_129S1SvImJ_G0015467.1 mouse_genomes_project 2 132385331 132390142 + Gm14027 processed_transcript processed_transcript MGP_129S1SvImJ_T0017825.1 MGP_129S1SvImJ_G0015433.1 mouse_genomes_project 2 84392475 84418429 - Gm13684 processed_transcript processed_transcript MGP_129S1SvImJ_T0013839.1 MGP_129S1SvImJ_G0011928.1 mouse_genomes_project 2 157322145 157322746 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059957.1 MGP_129S1SvImJ_G0027036.1 mouse_genomes_project 2 188341101 188347071 + MGP_129S1SvImJ_P0059957 Oprl1 protein_coding protein_coding MGP_129S1SvImJ_T0059958.1 MGP_129S1SvImJ_G0027036.1 mouse_genomes_project 2 188341127 188347061 + MGP_129S1SvImJ_P0059958 Oprl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059959.1 MGP_129S1SvImJ_G0027036.1 mouse_genomes_project 2 188341131 188344676 + MGP_129S1SvImJ_P0059959 Oprl1 protein_coding protein_coding MGP_129S1SvImJ_T0059960.1 MGP_129S1SvImJ_G0027036.1 mouse_genomes_project 2 188341152 188347060 + MGP_129S1SvImJ_P0059960 Oprl1 protein_coding protein_coding MGP_129S1SvImJ_T0059961.1 MGP_129S1SvImJ_G0027036.1 mouse_genomes_project 2 188341168 188347058 + MGP_129S1SvImJ_P0059961 Oprl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059962.1 MGP_129S1SvImJ_G0027036.1 mouse_genomes_project 2 188341179 188347060 + Oprl1 protein_coding processed_transcript MGP_129S1SvImJ_T0059963.1 MGP_129S1SvImJ_G0027036.1 mouse_genomes_project 2 188341186 188342464 + Oprl1 protein_coding processed_transcript MGP_129S1SvImJ_T0059964.1 MGP_129S1SvImJ_G0027036.1 mouse_genomes_project 2 188341433 188347058 + MGP_129S1SvImJ_P0059964 Oprl1 protein_coding protein_coding MGP_129S1SvImJ_T0059965.1 MGP_129S1SvImJ_G0027036.1 mouse_genomes_project 2 188341678 188345437 + MGP_129S1SvImJ_P0059965 Oprl1 protein_coding protein_coding MGP_129S1SvImJ_T0059966.1 MGP_129S1SvImJ_G0027036.1 mouse_genomes_project 2 188341787 188345458 + MGP_129S1SvImJ_P0059966 Oprl1 protein_coding protein_coding MGP_129S1SvImJ_T0059967.1 MGP_129S1SvImJ_G0027036.1 mouse_genomes_project 2 188341788 188345458 + MGP_129S1SvImJ_P0059967 Oprl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0017951.1 MGP_129S1SvImJ_G0015492.1 mouse_genomes_project 2 174657441 174659408 + Gm14261 processed_transcript processed_transcript MGP_129S1SvImJ_T0058049.1 MGP_129S1SvImJ_G0026588.1 mouse_genomes_project 2 148648034 148656585 - MGP_129S1SvImJ_P0058049 Rbbp9 protein_coding protein_coding MGP_129S1SvImJ_T0058050.1 MGP_129S1SvImJ_G0026588.1 mouse_genomes_project 2 148649583 148656506 - Rbbp9 protein_coding processed_transcript MGP_129S1SvImJ_T0053973.1 MGP_129S1SvImJ_G0025586.1 mouse_genomes_project 2 29922264 29971377 + MGP_129S1SvImJ_P0053973 Fubp3 protein_coding protein_coding MGP_129S1SvImJ_T0053974.1 MGP_129S1SvImJ_G0025586.1 mouse_genomes_project 2 29922404 29946619 + MGP_129S1SvImJ_P0053974 Fubp3 protein_coding protein_coding MGP_129S1SvImJ_T0053975.1 MGP_129S1SvImJ_G0025586.1 mouse_genomes_project 2 29922405 29934515 + Fubp3 protein_coding retained_intron MGP_129S1SvImJ_T0053976.1 MGP_129S1SvImJ_G0025586.1 mouse_genomes_project 2 29922427 29949910 + MGP_129S1SvImJ_P0053976 Fubp3 protein_coding protein_coding MGP_129S1SvImJ_T0053977.1 MGP_129S1SvImJ_G0025586.1 mouse_genomes_project 2 29922430 29971370 + MGP_129S1SvImJ_P0053977 Fubp3 protein_coding protein_coding MGP_129S1SvImJ_T0053978.1 MGP_129S1SvImJ_G0025586.1 mouse_genomes_project 2 29922440 29949896 + MGP_129S1SvImJ_P0053978 Fubp3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053979.1 MGP_129S1SvImJ_G0025586.1 mouse_genomes_project 2 29954618 29966963 + MGP_129S1SvImJ_P0053979 Fubp3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053980.1 MGP_129S1SvImJ_G0025586.1 mouse_genomes_project 2 29956053 29969788 + MGP_129S1SvImJ_P0053980 Fubp3 protein_coding protein_coding MGP_129S1SvImJ_T0053981.1 MGP_129S1SvImJ_G0025586.1 mouse_genomes_project 2 29966386 29970567 + MGP_129S1SvImJ_P0053981 Fubp3 protein_coding protein_coding MGP_129S1SvImJ_T0053982.1 MGP_129S1SvImJ_G0025586.1 mouse_genomes_project 2 29968616 29971369 + MGP_129S1SvImJ_P0053982 Fubp3 protein_coding protein_coding MGP_129S1SvImJ_T0053983.1 MGP_129S1SvImJ_G0025586.1 mouse_genomes_project 2 29969034 29971371 + Fubp3 protein_coding retained_intron MGP_129S1SvImJ_T0010430.1 MGP_129S1SvImJ_G0008546.1 mouse_genomes_project 2 51602823 51602973 + Gm22095 miRNA miRNA MGP_129S1SvImJ_T0059635.1 MGP_129S1SvImJ_G0026975.1 mouse_genomes_project 2 184533005 184763103 + MGP_129S1SvImJ_P0059635 Phactr3 protein_coding protein_coding MGP_129S1SvImJ_T0059636.1 MGP_129S1SvImJ_G0026975.1 mouse_genomes_project 2 184533209 184761102 + MGP_129S1SvImJ_P0059636 Phactr3 protein_coding protein_coding MGP_129S1SvImJ_T0059637.1 MGP_129S1SvImJ_G0026975.1 mouse_genomes_project 2 184557511 184761107 + MGP_129S1SvImJ_P0059637 Phactr3 protein_coding protein_coding MGP_129S1SvImJ_T0059638.1 MGP_129S1SvImJ_G0026975.1 mouse_genomes_project 2 184590439 184761102 + MGP_129S1SvImJ_P0059638 Phactr3 protein_coding protein_coding MGP_129S1SvImJ_T0059639.1 MGP_129S1SvImJ_G0026975.1 mouse_genomes_project 2 184752166 184756377 + Phactr3 protein_coding retained_intron MGP_129S1SvImJ_T0059640.1 MGP_129S1SvImJ_G0026975.1 mouse_genomes_project 2 184752402 184757441 + Phactr3 protein_coding retained_intron MGP_129S1SvImJ_T0054169.1 MGP_129S1SvImJ_G0025615.1 mouse_genomes_project 2 31099790 31112930 + MGP_129S1SvImJ_P0054169 Ak1 protein_coding protein_coding MGP_129S1SvImJ_T0054170.1 MGP_129S1SvImJ_G0025615.1 mouse_genomes_project 2 31103469 31112926 + MGP_129S1SvImJ_P0054170 Ak1 protein_coding protein_coding MGP_129S1SvImJ_T0054171.1 MGP_129S1SvImJ_G0025615.1 mouse_genomes_project 2 31103470 31109031 + MGP_129S1SvImJ_P0054171 Ak1 protein_coding protein_coding MGP_129S1SvImJ_T0054172.1 MGP_129S1SvImJ_G0025615.1 mouse_genomes_project 2 31106248 31108994 + MGP_129S1SvImJ_P0054172 Ak1 protein_coding protein_coding MGP_129S1SvImJ_T0054173.1 MGP_129S1SvImJ_G0025615.1 mouse_genomes_project 2 31107362 31112924 + MGP_129S1SvImJ_P0054173 Ak1 protein_coding protein_coding MGP_129S1SvImJ_T0054174.1 MGP_129S1SvImJ_G0025615.1 mouse_genomes_project 2 31107379 31111272 + Ak1 protein_coding retained_intron MGP_129S1SvImJ_T0013530.1 MGP_129S1SvImJ_G0011619.1 mouse_genomes_project 2 45553383 45553733 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057569.1 MGP_129S1SvImJ_G0026477.1 mouse_genomes_project 2 132230924 132264814 + MGP_129S1SvImJ_P0057569 Fbln7 protein_coding protein_coding MGP_129S1SvImJ_T0057570.1 MGP_129S1SvImJ_G0026477.1 mouse_genomes_project 2 132231877 132264810 + MGP_129S1SvImJ_P0057570 Fbln7 protein_coding protein_coding MGP_129S1SvImJ_T0055868.1 MGP_129S1SvImJ_G0026062.1 mouse_genomes_project 2 89852205 89853183 - MGP_129S1SvImJ_P0055868 Olfr1196 protein_coding protein_coding MGP_129S1SvImJ_T0007281.1 MGP_129S1SvImJ_G0005973.1 mouse_genomes_project 2 101063045 101063530 - Gm29235 lincRNA lincRNA MGP_129S1SvImJ_T0004123.1 MGP_129S1SvImJ_G0003649.1 mouse_genomes_project 2 145194076 145199786 - Macrod2os2 antisense antisense MGP_129S1SvImJ_T0004125.1 MGP_129S1SvImJ_G0003649.1 mouse_genomes_project 2 145196390 145196777 - Macrod2os2 antisense antisense MGP_129S1SvImJ_T0004197.1 MGP_129S1SvImJ_G0003709.1 mouse_genomes_project 2 179270171 179279065 - Gm14453 antisense antisense MGP_129S1SvImJ_T0007407.1 MGP_129S1SvImJ_G0006077.1 mouse_genomes_project 2 173551670 173556773 + Gm14321 lincRNA lincRNA MGP_129S1SvImJ_T0007408.1 MGP_129S1SvImJ_G0006077.1 mouse_genomes_project 2 173551739 173556330 + Gm14321 lincRNA lincRNA MGP_129S1SvImJ_T0056720.1 MGP_129S1SvImJ_G0026302.1 mouse_genomes_project 2 116577824 116652706 - MGP_129S1SvImJ_P0056720 Aqr protein_coding protein_coding MGP_129S1SvImJ_T0056721.1 MGP_129S1SvImJ_G0026302.1 mouse_genomes_project 2 116581816 116652644 - MGP_129S1SvImJ_P0056721 Aqr protein_coding protein_coding MGP_129S1SvImJ_T0056722.1 MGP_129S1SvImJ_G0026302.1 mouse_genomes_project 2 116588728 116595734 - Aqr protein_coding processed_transcript MGP_129S1SvImJ_T0056723.1 MGP_129S1SvImJ_G0026302.1 mouse_genomes_project 2 116609533 116617690 - Aqr protein_coding processed_transcript MGP_129S1SvImJ_T0056724.1 MGP_129S1SvImJ_G0026302.1 mouse_genomes_project 2 116609914 116652613 - Aqr protein_coding processed_transcript MGP_129S1SvImJ_T0056725.1 MGP_129S1SvImJ_G0026302.1 mouse_genomes_project 2 116629291 116652705 - Aqr protein_coding processed_transcript MGP_129S1SvImJ_T0056726.1 MGP_129S1SvImJ_G0026302.1 mouse_genomes_project 2 116636011 116652705 - Aqr protein_coding processed_transcript MGP_129S1SvImJ_T0056727.1 MGP_129S1SvImJ_G0026302.1 mouse_genomes_project 2 116647457 116652783 - Aqr protein_coding processed_transcript MGP_129S1SvImJ_T0055599.1 MGP_129S1SvImJ_G0025895.1 mouse_genomes_project 2 84612896 84616149 + MGP_129S1SvImJ_P0055599 protein_coding protein_coding MGP_129S1SvImJ_T0011532.1 MGP_129S1SvImJ_G0009648.1 mouse_genomes_project 2 129468994 129469286 - Gm24739 misc_RNA misc_RNA MGP_129S1SvImJ_T0017844.1 MGP_129S1SvImJ_G0015446.1 mouse_genomes_project 2 94507136 94514881 + 4631405J19Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017845.1 MGP_129S1SvImJ_G0015446.1 mouse_genomes_project 2 94507136 94514881 + 4631405J19Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017846.1 MGP_129S1SvImJ_G0015446.1 mouse_genomes_project 2 94508528 94514908 + 4631405J19Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017847.1 MGP_129S1SvImJ_G0015446.1 mouse_genomes_project 2 94508529 94513178 + 4631405J19Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017848.1 MGP_129S1SvImJ_G0015446.1 mouse_genomes_project 2 94509624 94529518 + 4631405J19Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0055736.1 MGP_129S1SvImJ_G0025945.1 mouse_genomes_project 2 86702362 86703301 + MGP_129S1SvImJ_P0055736 Olfr1025-ps1 protein_coding protein_coding MGP_129S1SvImJ_T0055737.1 MGP_129S1SvImJ_G0025945.1 mouse_genomes_project 2 86702362 86703283 + MGP_129S1SvImJ_P0055737 Olfr1025-ps1 protein_coding protein_coding MGP_129S1SvImJ_T0055763.1 MGP_129S1SvImJ_G0025971.1 mouse_genomes_project 2 87356016 87356958 - MGP_129S1SvImJ_P0055763 Olfr1065 protein_coding protein_coding MGP_129S1SvImJ_T0053105.1 MGP_129S1SvImJ_G0025440.1 mouse_genomes_project 2 23229904 23233974 - Dpp7 protein_coding processed_transcript MGP_129S1SvImJ_T0053106.1 MGP_129S1SvImJ_G0025440.1 mouse_genomes_project 2 23229915 23233960 - Dpp7 protein_coding processed_transcript MGP_129S1SvImJ_T0053107.1 MGP_129S1SvImJ_G0025440.1 mouse_genomes_project 2 23229918 23230503 - Dpp7 protein_coding processed_transcript MGP_129S1SvImJ_T0053108.1 MGP_129S1SvImJ_G0025440.1 mouse_genomes_project 2 23229918 23233988 - MGP_129S1SvImJ_P0053108 Dpp7 protein_coding protein_coding MGP_129S1SvImJ_T0053109.1 MGP_129S1SvImJ_G0025440.1 mouse_genomes_project 2 23230782 23233687 - Dpp7 protein_coding processed_transcript MGP_129S1SvImJ_T0053110.1 MGP_129S1SvImJ_G0025440.1 mouse_genomes_project 2 23230988 23233926 - Dpp7 protein_coding processed_transcript MGP_129S1SvImJ_T0053111.1 MGP_129S1SvImJ_G0025440.1 mouse_genomes_project 2 23232096 23233926 - Dpp7 protein_coding processed_transcript MGP_129S1SvImJ_T0053112.1 MGP_129S1SvImJ_G0025440.1 mouse_genomes_project 2 23232625 23233982 - Dpp7 protein_coding processed_transcript MGP_129S1SvImJ_T0053113.1 MGP_129S1SvImJ_G0025440.1 mouse_genomes_project 2 23233070 23233975 - Dpp7 protein_coding processed_transcript MGP_129S1SvImJ_T0053114.1 MGP_129S1SvImJ_G0025440.1 mouse_genomes_project 2 23233331 23233961 - Dpp7 protein_coding processed_transcript MGP_129S1SvImJ_T0056318.1 MGP_129S1SvImJ_G0026182.1 mouse_genomes_project 2 95478187 95518470 - MGP_129S1SvImJ_P0056318 Gm27027 protein_coding protein_coding MGP_129S1SvImJ_T0001096.1 MGP_129S1SvImJ_G0001025.1 mouse_genomes_project 2 37293876 37296474 - TEC TEC MGP_129S1SvImJ_T0102400.1 MGP_129S1SvImJ_G0040234.1 mouse_genomes_project 2 86426658 86427383 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099662.1 MGP_129S1SvImJ_G0037729.1 mouse_genomes_project 2 23215432 23215527 + Gm25220 snRNA snRNA MGP_129S1SvImJ_T0007305.1 MGP_129S1SvImJ_G0005994.1 mouse_genomes_project 2 118045936 118065365 - 3110099E03Rik lincRNA lincRNA MGP_129S1SvImJ_T0007306.1 MGP_129S1SvImJ_G0005994.1 mouse_genomes_project 2 118047452 118081727 - 3110099E03Rik lincRNA lincRNA MGP_129S1SvImJ_T0007307.1 MGP_129S1SvImJ_G0005994.1 mouse_genomes_project 2 118048158 118065371 - 3110099E03Rik lincRNA lincRNA MGP_129S1SvImJ_T0007209.1 MGP_129S1SvImJ_G0005914.1 mouse_genomes_project 2 50697723 50716169 - 1700057H21Rik lincRNA lincRNA MGP_129S1SvImJ_T0007210.1 MGP_129S1SvImJ_G0005914.1 mouse_genomes_project 2 50697789 50715322 - 1700057H21Rik lincRNA lincRNA MGP_129S1SvImJ_T0056773.1 MGP_129S1SvImJ_G0026311.1 mouse_genomes_project 2 120786392 120801608 + MGP_129S1SvImJ_P0056773 Thbs1 protein_coding protein_coding MGP_129S1SvImJ_T0056774.1 MGP_129S1SvImJ_G0026311.1 mouse_genomes_project 2 120797417 120798242 + Thbs1 protein_coding processed_transcript MGP_129S1SvImJ_T0102428.1 MGP_129S1SvImJ_G0040262.1 mouse_genomes_project 2 89757106 89790096 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0056516.1 MGP_129S1SvImJ_G0026224.1 mouse_genomes_project 2 107005527 107094218 + MGP_129S1SvImJ_P0056516 Ccdc73 protein_coding protein_coding MGP_129S1SvImJ_T0056517.1 MGP_129S1SvImJ_G0026224.1 mouse_genomes_project 2 107024865 107139602 + MGP_129S1SvImJ_P0056517 Ccdc73 protein_coding protein_coding MGP_129S1SvImJ_T0056518.1 MGP_129S1SvImJ_G0026224.1 mouse_genomes_project 2 107048650 107129725 + MGP_129S1SvImJ_P0056518 Ccdc73 protein_coding protein_coding MGP_129S1SvImJ_T0056519.1 MGP_129S1SvImJ_G0026224.1 mouse_genomes_project 2 107132074 107159502 + MGP_129S1SvImJ_P0056519 Ccdc73 protein_coding protein_coding MGP_129S1SvImJ_T0056524.1 MGP_129S1SvImJ_G0026224.1 mouse_genomes_project 2 107158770 107159555 + Ccdc73 protein_coding processed_transcript MGP_129S1SvImJ_T0011521.1 MGP_129S1SvImJ_G0009637.1 mouse_genomes_project 2 66462266 66462550 + Gm23046 misc_RNA misc_RNA MGP_129S1SvImJ_T0101887.1 MGP_129S1SvImJ_G0039812.1 mouse_genomes_project 2 87843467 87844415 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0052829.1 MGP_129S1SvImJ_G0025388.1 mouse_genomes_project 2 19022427 19031713 + MGP_129S1SvImJ_P0052829 Thnsl1 protein_coding protein_coding MGP_129S1SvImJ_T0052830.1 MGP_129S1SvImJ_G0025388.1 mouse_genomes_project 2 19022442 19031080 + MGP_129S1SvImJ_P0052830 Thnsl1 protein_coding protein_coding MGP_129S1SvImJ_T0052831.1 MGP_129S1SvImJ_G0025388.1 mouse_genomes_project 2 19022462 19029983 + MGP_129S1SvImJ_P0052831 Thnsl1 protein_coding protein_coding MGP_129S1SvImJ_T0052832.1 MGP_129S1SvImJ_G0025388.1 mouse_genomes_project 2 19022476 19028246 + MGP_129S1SvImJ_P0052832 Thnsl1 protein_coding protein_coding MGP_129S1SvImJ_T0052833.1 MGP_129S1SvImJ_G0025388.1 mouse_genomes_project 2 19022490 19031012 + MGP_129S1SvImJ_P0052833 Thnsl1 protein_coding protein_coding MGP_129S1SvImJ_T0054526.1 MGP_129S1SvImJ_G0025696.1 mouse_genomes_project 2 36133838 36193534 + MGP_129S1SvImJ_P0054526 Rabgap1 protein_coding protein_coding MGP_129S1SvImJ_T0054527.1 MGP_129S1SvImJ_G0025696.1 mouse_genomes_project 2 36133844 36267828 + MGP_129S1SvImJ_P0054527 Rabgap1 protein_coding protein_coding MGP_129S1SvImJ_T0054528.1 MGP_129S1SvImJ_G0025696.1 mouse_genomes_project 2 36133855 36186071 + Rabgap1 protein_coding retained_intron MGP_129S1SvImJ_T0054529.1 MGP_129S1SvImJ_G0025696.1 mouse_genomes_project 2 36142192 36144345 + Rabgap1 protein_coding processed_transcript MGP_129S1SvImJ_T0054530.1 MGP_129S1SvImJ_G0025696.1 mouse_genomes_project 2 36142801 36167723 + MGP_129S1SvImJ_P0054530 Rabgap1 protein_coding protein_coding MGP_129S1SvImJ_T0054531.1 MGP_129S1SvImJ_G0025696.1 mouse_genomes_project 2 36142801 36245211 + MGP_129S1SvImJ_P0054531 Rabgap1 protein_coding protein_coding MGP_129S1SvImJ_T0054532.1 MGP_129S1SvImJ_G0025696.1 mouse_genomes_project 2 36142823 36267845 + MGP_129S1SvImJ_P0054532 Rabgap1 protein_coding protein_coding MGP_129S1SvImJ_T0054534.1 MGP_129S1SvImJ_G0025696.1 mouse_genomes_project 2 36188795 36191891 + Rabgap1 protein_coding retained_intron MGP_129S1SvImJ_T0054535.1 MGP_129S1SvImJ_G0025696.1 mouse_genomes_project 2 36189875 36208378 + Rabgap1 protein_coding processed_transcript MGP_129S1SvImJ_T0054537.1 MGP_129S1SvImJ_G0025696.1 mouse_genomes_project 2 36216777 36266444 + Rabgap1 protein_coding processed_transcript MGP_129S1SvImJ_T0056510.1 MGP_129S1SvImJ_G0026220.1 mouse_genomes_project 2 106828922 106831277 - MGP_129S1SvImJ_P0056510 Pin1rt1 protein_coding protein_coding MGP_129S1SvImJ_T0013681.1 MGP_129S1SvImJ_G0011770.1 mouse_genomes_project 2 95316643 95317154 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100968.1 MGP_129S1SvImJ_G0039035.1 mouse_genomes_project 2 133503912 133504041 + Gm24665 snoRNA snoRNA MGP_129S1SvImJ_T0052770.1 MGP_129S1SvImJ_G0025377.1 mouse_genomes_project 2 16410325 16415178 + Spag6 protein_coding processed_transcript MGP_129S1SvImJ_T0052771.1 MGP_129S1SvImJ_G0025377.1 mouse_genomes_project 2 16410345 16415331 + Spag6 protein_coding processed_transcript MGP_129S1SvImJ_T0052772.1 MGP_129S1SvImJ_G0025377.1 mouse_genomes_project 2 16415316 16470177 + MGP_129S1SvImJ_P0052772 Spag6 protein_coding protein_coding MGP_129S1SvImJ_T0052773.1 MGP_129S1SvImJ_G0025377.1 mouse_genomes_project 2 16415377 16450652 + MGP_129S1SvImJ_P0052773 Spag6 protein_coding protein_coding MGP_129S1SvImJ_T0100941.1 MGP_129S1SvImJ_G0039008.1 mouse_genomes_project 2 54003634 54003773 - Gm24549 snoRNA snoRNA MGP_129S1SvImJ_T0057550.1 MGP_129S1SvImJ_G0026474.1 mouse_genomes_project 2 131954512 132040419 - MGP_129S1SvImJ_P0057550 Anapc1 protein_coding protein_coding MGP_129S1SvImJ_T0057551.1 MGP_129S1SvImJ_G0026474.1 mouse_genomes_project 2 131959811 131962558 - Anapc1 protein_coding processed_transcript MGP_129S1SvImJ_T0057552.1 MGP_129S1SvImJ_G0026474.1 mouse_genomes_project 2 131961988 131967258 - Anapc1 protein_coding processed_transcript MGP_129S1SvImJ_T0057553.1 MGP_129S1SvImJ_G0026474.1 mouse_genomes_project 2 131966787 131971874 - Anapc1 protein_coding processed_transcript MGP_129S1SvImJ_T0057554.1 MGP_129S1SvImJ_G0026474.1 mouse_genomes_project 2 131968152 131973052 - Anapc1 protein_coding processed_transcript MGP_129S1SvImJ_T0057555.1 MGP_129S1SvImJ_G0026474.1 mouse_genomes_project 2 131972955 131974448 - Anapc1 protein_coding processed_transcript MGP_129S1SvImJ_T0057556.1 MGP_129S1SvImJ_G0026474.1 mouse_genomes_project 2 131988737 132040404 - MGP_129S1SvImJ_P0057556 Anapc1 protein_coding protein_coding MGP_129S1SvImJ_T0057557.1 MGP_129S1SvImJ_G0026474.1 mouse_genomes_project 2 132009612 132015069 - Anapc1 protein_coding processed_transcript MGP_129S1SvImJ_T0057558.1 MGP_129S1SvImJ_G0026474.1 mouse_genomes_project 2 132011491 132015912 - Anapc1 protein_coding processed_transcript MGP_129S1SvImJ_T0057559.1 MGP_129S1SvImJ_G0026474.1 mouse_genomes_project 2 132029013 132040403 - Anapc1 protein_coding processed_transcript MGP_129S1SvImJ_T0057560.1 MGP_129S1SvImJ_G0026474.1 mouse_genomes_project 2 132038076 132040382 - MGP_129S1SvImJ_P0057560 Anapc1 protein_coding protein_coding MGP_129S1SvImJ_T0055320.1 MGP_129S1SvImJ_G0025836.1 mouse_genomes_project 2 73581642 73610007 + MGP_129S1SvImJ_P0055320 Scrn3 protein_coding protein_coding MGP_129S1SvImJ_T0055321.1 MGP_129S1SvImJ_G0025836.1 mouse_genomes_project 2 73581695 73592195 + MGP_129S1SvImJ_P0055321 Scrn3 protein_coding protein_coding MGP_129S1SvImJ_T0055322.1 MGP_129S1SvImJ_G0025836.1 mouse_genomes_project 2 73581700 73586113 + Scrn3 protein_coding processed_transcript MGP_129S1SvImJ_T0055323.1 MGP_129S1SvImJ_G0025836.1 mouse_genomes_project 2 73581700 73601991 + Scrn3 protein_coding processed_transcript MGP_129S1SvImJ_T0055324.1 MGP_129S1SvImJ_G0025836.1 mouse_genomes_project 2 73581717 73593421 + Scrn3 protein_coding processed_transcript MGP_129S1SvImJ_T0055325.1 MGP_129S1SvImJ_G0025836.1 mouse_genomes_project 2 73590798 73608488 + Scrn3 protein_coding processed_transcript MGP_129S1SvImJ_T0055832.1 MGP_129S1SvImJ_G0026028.1 mouse_genomes_project 2 88873890 88874868 + MGP_129S1SvImJ_P0055832 Olfr1145 protein_coding protein_coding MGP_129S1SvImJ_T0056653.1 MGP_129S1SvImJ_G0026268.1 mouse_genomes_project 2 114087292 114088231 - MGP_129S1SvImJ_P0056653 Olfr1297 protein_coding protein_coding MGP_129S1SvImJ_T0059180.1 MGP_129S1SvImJ_G0026871.1 mouse_genomes_project 2 170267396 170271164 + MGP_129S1SvImJ_P0059180 Ube2c protein_coding protein_coding MGP_129S1SvImJ_T0059181.1 MGP_129S1SvImJ_G0026871.1 mouse_genomes_project 2 170267401 170276638 + MGP_129S1SvImJ_P0059181 Ube2c protein_coding protein_coding MGP_129S1SvImJ_T0055801.1 MGP_129S1SvImJ_G0026007.1 mouse_genomes_project 2 88456971 88457943 + MGP_129S1SvImJ_P0055801 Olfr1123 protein_coding protein_coding MGP_129S1SvImJ_T0007393.1 MGP_129S1SvImJ_G0006066.1 mouse_genomes_project 2 171169635 171169960 - Gm28163 lincRNA lincRNA MGP_129S1SvImJ_T0013804.1 MGP_129S1SvImJ_G0011893.1 mouse_genomes_project 2 147533646 147534265 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055319.1 MGP_129S1SvImJ_G0025835.1 mouse_genomes_project 2 73574960 73581608 - protein_coding processed_transcript MGP_129S1SvImJ_T0007139.1 MGP_129S1SvImJ_G0005860.1 mouse_genomes_project 2 4737597 4740987 + lincRNA lincRNA MGP_129S1SvImJ_T0059664.1 MGP_129S1SvImJ_G0026983.1 mouse_genomes_project 2 186533458 186534470 - Psma7 protein_coding retained_intron MGP_129S1SvImJ_T0059665.1 MGP_129S1SvImJ_G0026983.1 mouse_genomes_project 2 186533459 186539501 - Psma7 protein_coding retained_intron MGP_129S1SvImJ_T0059666.1 MGP_129S1SvImJ_G0026983.1 mouse_genomes_project 2 186533459 186539539 - MGP_129S1SvImJ_P0059666 Psma7 protein_coding protein_coding MGP_129S1SvImJ_T0059667.1 MGP_129S1SvImJ_G0026983.1 mouse_genomes_project 2 186533904 186534574 - Psma7 protein_coding retained_intron MGP_129S1SvImJ_T0059668.1 MGP_129S1SvImJ_G0026983.1 mouse_genomes_project 2 186534721 186535910 - Psma7 protein_coding retained_intron MGP_129S1SvImJ_T0059669.1 MGP_129S1SvImJ_G0026983.1 mouse_genomes_project 2 186535157 186537234 - Psma7 protein_coding retained_intron MGP_129S1SvImJ_T0059670.1 MGP_129S1SvImJ_G0026983.1 mouse_genomes_project 2 186536384 186539491 - Psma7 protein_coding processed_transcript MGP_129S1SvImJ_T0056534.1 MGP_129S1SvImJ_G0026228.1 mouse_genomes_project 2 107376833 107538887 + MGP_129S1SvImJ_P0056534 Them7 protein_coding protein_coding MGP_129S1SvImJ_T0056535.1 MGP_129S1SvImJ_G0026228.1 mouse_genomes_project 2 107376855 107538126 + Them7 protein_coding processed_transcript MGP_129S1SvImJ_T0013684.1 MGP_129S1SvImJ_G0011773.1 mouse_genomes_project 2 96150186 96150787 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101667.1 MGP_129S1SvImJ_G0039690.1 mouse_genomes_project 2 37969785 37974535 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101668.1 MGP_129S1SvImJ_G0039690.1 mouse_genomes_project 2 37973516 37974289 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0053869.1 MGP_129S1SvImJ_G0025571.1 mouse_genomes_project 2 28847639 28861542 + MGP_129S1SvImJ_P0053869 Cstad protein_coding protein_coding MGP_129S1SvImJ_T0053870.1 MGP_129S1SvImJ_G0025571.1 mouse_genomes_project 2 28857803 28860816 + Cstad protein_coding processed_transcript MGP_129S1SvImJ_T0001060.1 MGP_129S1SvImJ_G0000989.1 mouse_genomes_project 2 10477194 10480430 + TEC TEC MGP_129S1SvImJ_T0055918.1 MGP_129S1SvImJ_G0026103.1 mouse_genomes_project 2 90812984 90813929 - MGP_129S1SvImJ_P0055918 Olfr1247 protein_coding protein_coding MGP_129S1SvImJ_T0055919.1 MGP_129S1SvImJ_G0026103.1 mouse_genomes_project 2 90812984 90817862 - MGP_129S1SvImJ_P0055919 Olfr1247 protein_coding protein_coding MGP_129S1SvImJ_T0055920.1 MGP_129S1SvImJ_G0026103.1 mouse_genomes_project 2 90813685 90815474 - MGP_129S1SvImJ_P0055920 Olfr1247 protein_coding protein_coding MGP_129S1SvImJ_T0059483.1 MGP_129S1SvImJ_G0026929.1 mouse_genomes_project 2 174635562 174658501 - MGP_129S1SvImJ_P0059483 Sall4 protein_coding protein_coding MGP_129S1SvImJ_T0059484.1 MGP_129S1SvImJ_G0026929.1 mouse_genomes_project 2 174635562 174658501 - MGP_129S1SvImJ_P0059484 Sall4 protein_coding protein_coding MGP_129S1SvImJ_T0059485.1 MGP_129S1SvImJ_G0026929.1 mouse_genomes_project 2 174635562 174658329 - MGP_129S1SvImJ_P0059485 Sall4 protein_coding protein_coding MGP_129S1SvImJ_T0059486.1 MGP_129S1SvImJ_G0026929.1 mouse_genomes_project 2 174643250 174644279 - MGP_129S1SvImJ_P0059486 Sall4 protein_coding protein_coding MGP_129S1SvImJ_T0059487.1 MGP_129S1SvImJ_G0026929.1 mouse_genomes_project 2 174644516 174656546 - MGP_129S1SvImJ_P0059487 Sall4 protein_coding protein_coding MGP_129S1SvImJ_T0059488.1 MGP_129S1SvImJ_G0026929.1 mouse_genomes_project 2 174644949 174659243 - Sall4 protein_coding processed_transcript MGP_129S1SvImJ_T0059489.1 MGP_129S1SvImJ_G0026929.1 mouse_genomes_project 2 174645088 174658417 - Sall4 protein_coding processed_transcript MGP_129S1SvImJ_T0055096.1 MGP_129S1SvImJ_G0025791.1 mouse_genomes_project 2 68510096 68543413 + MGP_129S1SvImJ_P0055096 4933409G03Rik protein_coding protein_coding MGP_129S1SvImJ_T0055097.1 MGP_129S1SvImJ_G0025791.1 mouse_genomes_project 2 68521252 68541733 + MGP_129S1SvImJ_P0055097 4933409G03Rik protein_coding protein_coding MGP_129S1SvImJ_T0013709.1 MGP_129S1SvImJ_G0011798.1 mouse_genomes_project 2 105846079 105846321 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010369.1 MGP_129S1SvImJ_G0008485.1 mouse_genomes_project 2 7865652 7865779 + Gm22091 miRNA miRNA MGP_129S1SvImJ_T0052967.1 MGP_129S1SvImJ_G0025414.1 mouse_genomes_project 2 22792632 22806436 + MGP_129S1SvImJ_P0052967 Zmynd19 protein_coding protein_coding MGP_129S1SvImJ_T0010386.1 MGP_129S1SvImJ_G0008502.1 mouse_genomes_project 2 7878342 7878432 + Gm24806 miRNA miRNA MGP_129S1SvImJ_T0013902.1 MGP_129S1SvImJ_G0011991.1 mouse_genomes_project 2 186483597 186484006 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102448.1 MGP_129S1SvImJ_G0040282.1 mouse_genomes_project 2 161835391 161871082 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0052526.1 MGP_129S1SvImJ_G0025343.1 mouse_genomes_project 2 8884015 8970918 - MGP_129S1SvImJ_P0052526 Pfkfb3 protein_coding protein_coding MGP_129S1SvImJ_T0052527.1 MGP_129S1SvImJ_G0025343.1 mouse_genomes_project 2 8884373 8917317 - MGP_129S1SvImJ_P0052527 Pfkfb3 protein_coding protein_coding MGP_129S1SvImJ_T0052528.1 MGP_129S1SvImJ_G0025343.1 mouse_genomes_project 2 8884406 8917317 - MGP_129S1SvImJ_P0052528 Pfkfb3 protein_coding protein_coding MGP_129S1SvImJ_T0052529.1 MGP_129S1SvImJ_G0025343.1 mouse_genomes_project 2 8884408 8917317 - MGP_129S1SvImJ_P0052529 Pfkfb3 protein_coding protein_coding MGP_129S1SvImJ_T0052530.1 MGP_129S1SvImJ_G0025343.1 mouse_genomes_project 2 8884408 8970763 - MGP_129S1SvImJ_P0052530 Pfkfb3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052531.1 MGP_129S1SvImJ_G0025343.1 mouse_genomes_project 2 8884410 8910942 - Pfkfb3 protein_coding processed_transcript MGP_129S1SvImJ_T0052532.1 MGP_129S1SvImJ_G0025343.1 mouse_genomes_project 2 8886989 8917317 - MGP_129S1SvImJ_P0052532 Pfkfb3 protein_coding protein_coding MGP_129S1SvImJ_T0052533.1 MGP_129S1SvImJ_G0025343.1 mouse_genomes_project 2 8886989 8916916 - MGP_129S1SvImJ_P0052533 Pfkfb3 protein_coding protein_coding MGP_129S1SvImJ_T0052534.1 MGP_129S1SvImJ_G0025343.1 mouse_genomes_project 2 8886989 8917317 - MGP_129S1SvImJ_P0052534 Pfkfb3 protein_coding protein_coding MGP_129S1SvImJ_T0052535.1 MGP_129S1SvImJ_G0025343.1 mouse_genomes_project 2 8886989 8917317 - MGP_129S1SvImJ_P0052535 Pfkfb3 protein_coding protein_coding MGP_129S1SvImJ_T0052536.1 MGP_129S1SvImJ_G0025343.1 mouse_genomes_project 2 8888346 8917306 - MGP_129S1SvImJ_P0052536 Pfkfb3 protein_coding protein_coding MGP_129S1SvImJ_T0052537.1 MGP_129S1SvImJ_G0025343.1 mouse_genomes_project 2 8888346 8917306 - MGP_129S1SvImJ_P0052537 Pfkfb3 protein_coding protein_coding MGP_129S1SvImJ_T0052538.1 MGP_129S1SvImJ_G0025343.1 mouse_genomes_project 2 8890537 8917317 - MGP_129S1SvImJ_P0052538 Pfkfb3 protein_coding protein_coding MGP_129S1SvImJ_T0052539.1 MGP_129S1SvImJ_G0025343.1 mouse_genomes_project 2 8890549 8917317 - MGP_129S1SvImJ_P0052539 Pfkfb3 protein_coding protein_coding MGP_129S1SvImJ_T0052540.1 MGP_129S1SvImJ_G0025343.1 mouse_genomes_project 2 8892464 8917291 - Pfkfb3 protein_coding retained_intron MGP_129S1SvImJ_T0052541.1 MGP_129S1SvImJ_G0025343.1 mouse_genomes_project 2 8893574 8894676 - Pfkfb3 protein_coding retained_intron MGP_129S1SvImJ_T0052542.1 MGP_129S1SvImJ_G0025343.1 mouse_genomes_project 2 8902909 8917233 - Pfkfb3 protein_coding processed_transcript MGP_129S1SvImJ_T0052543.1 MGP_129S1SvImJ_G0025343.1 mouse_genomes_project 2 8904871 8917013 - Pfkfb3 protein_coding retained_intron MGP_129S1SvImJ_T0052544.1 MGP_129S1SvImJ_G0025343.1 mouse_genomes_project 2 8905171 8910908 - Pfkfb3 protein_coding processed_transcript MGP_129S1SvImJ_T0052545.1 MGP_129S1SvImJ_G0025343.1 mouse_genomes_project 2 8905198 8916512 - Pfkfb3 protein_coding retained_intron MGP_129S1SvImJ_T0052546.1 MGP_129S1SvImJ_G0025343.1 mouse_genomes_project 2 8906467 8916079 - Pfkfb3 protein_coding processed_transcript MGP_129S1SvImJ_T0004169.1 MGP_129S1SvImJ_G0003688.1 mouse_genomes_project 2 168842247 168886508 - Hnf4aos antisense antisense MGP_129S1SvImJ_T0004170.1 MGP_129S1SvImJ_G0003688.1 mouse_genomes_project 2 168842247 168886508 - Hnf4aos antisense antisense MGP_129S1SvImJ_T0004171.1 MGP_129S1SvImJ_G0003688.1 mouse_genomes_project 2 168842634 168886480 - Hnf4aos antisense antisense MGP_129S1SvImJ_T0058012.1 MGP_129S1SvImJ_G0026580.1 mouse_genomes_project 2 148090132 148135546 + MGP_129S1SvImJ_P0058012 Banf2 protein_coding protein_coding MGP_129S1SvImJ_T0058013.1 MGP_129S1SvImJ_G0026580.1 mouse_genomes_project 2 148090175 148135546 + MGP_129S1SvImJ_P0058013 Banf2 protein_coding protein_coding MGP_129S1SvImJ_T0102386.1 MGP_129S1SvImJ_G0040220.1 mouse_genomes_project 2 35016252 35016705 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0007165.1 MGP_129S1SvImJ_G0005879.1 mouse_genomes_project 2 23199310 23206319 - AA543186 lincRNA lincRNA MGP_129S1SvImJ_T0004014.1 MGP_129S1SvImJ_G0003579.1 mouse_genomes_project 2 69185101 69217982 + Gm13613 antisense antisense MGP_129S1SvImJ_T0055842.1 MGP_129S1SvImJ_G0026038.1 mouse_genomes_project 2 89062719 89064052 - MGP_129S1SvImJ_P0055842 protein_coding protein_coding MGP_129S1SvImJ_T0053199.1 MGP_129S1SvImJ_G0025453.1 mouse_genomes_project 2 23414080 23444439 - MGP_129S1SvImJ_P0053199 Traf2 protein_coding protein_coding MGP_129S1SvImJ_T0053200.1 MGP_129S1SvImJ_G0025453.1 mouse_genomes_project 2 23414964 23435064 - Traf2 protein_coding retained_intron MGP_129S1SvImJ_T0053201.1 MGP_129S1SvImJ_G0025453.1 mouse_genomes_project 2 23414964 23444409 - MGP_129S1SvImJ_P0053201 Traf2 protein_coding protein_coding MGP_129S1SvImJ_T0010505.1 MGP_129S1SvImJ_G0008621.1 mouse_genomes_project 2 186769818 186769894 + Mir3091 miRNA miRNA MGP_129S1SvImJ_T0057007.1 MGP_129S1SvImJ_G0026365.1 mouse_genomes_project 2 123219858 123270905 - MGP_129S1SvImJ_P0057007 Tmem87a protein_coding protein_coding MGP_129S1SvImJ_T0057008.1 MGP_129S1SvImJ_G0026365.1 mouse_genomes_project 2 123219858 123270925 - MGP_129S1SvImJ_P0057008 Tmem87a protein_coding protein_coding MGP_129S1SvImJ_T0057009.1 MGP_129S1SvImJ_G0026365.1 mouse_genomes_project 2 123219862 123270931 - Tmem87a protein_coding processed_transcript MGP_129S1SvImJ_T0057010.1 MGP_129S1SvImJ_G0026365.1 mouse_genomes_project 2 123220496 123270913 - Tmem87a protein_coding processed_transcript MGP_129S1SvImJ_T0057011.1 MGP_129S1SvImJ_G0026365.1 mouse_genomes_project 2 123221020 123229576 - MGP_129S1SvImJ_P0057011 Tmem87a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0057012.1 MGP_129S1SvImJ_G0026365.1 mouse_genomes_project 2 123230055 123270914 - MGP_129S1SvImJ_P0057012 Tmem87a protein_coding protein_coding MGP_129S1SvImJ_T0057013.1 MGP_129S1SvImJ_G0026365.1 mouse_genomes_project 2 123247624 123270949 - Tmem87a protein_coding processed_transcript MGP_129S1SvImJ_T0057014.1 MGP_129S1SvImJ_G0026365.1 mouse_genomes_project 2 123248129 123270917 - Tmem87a protein_coding retained_intron MGP_129S1SvImJ_T0059886.1 MGP_129S1SvImJ_G0027026.1 mouse_genomes_project 2 188094723 188115810 + MGP_129S1SvImJ_P0059886 Tpd52l2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059887.1 MGP_129S1SvImJ_G0027026.1 mouse_genomes_project 2 188094745 188108998 + Tpd52l2 protein_coding processed_transcript MGP_129S1SvImJ_T0059888.1 MGP_129S1SvImJ_G0027026.1 mouse_genomes_project 2 188094746 188118661 + MGP_129S1SvImJ_P0059888 Tpd52l2 protein_coding protein_coding MGP_129S1SvImJ_T0059889.1 MGP_129S1SvImJ_G0027026.1 mouse_genomes_project 2 188094762 188118066 + MGP_129S1SvImJ_P0059889 Tpd52l2 protein_coding protein_coding MGP_129S1SvImJ_T0059890.1 MGP_129S1SvImJ_G0027026.1 mouse_genomes_project 2 188094764 188115821 + MGP_129S1SvImJ_P0059890 Tpd52l2 protein_coding protein_coding MGP_129S1SvImJ_T0059891.1 MGP_129S1SvImJ_G0027026.1 mouse_genomes_project 2 188094768 188118657 + MGP_129S1SvImJ_P0059891 Tpd52l2 protein_coding protein_coding MGP_129S1SvImJ_T0059892.1 MGP_129S1SvImJ_G0027026.1 mouse_genomes_project 2 188094780 188116951 + MGP_129S1SvImJ_P0059892 Tpd52l2 protein_coding protein_coding MGP_129S1SvImJ_T0059893.1 MGP_129S1SvImJ_G0027026.1 mouse_genomes_project 2 188094810 188100134 + Tpd52l2 protein_coding retained_intron MGP_129S1SvImJ_T0059894.1 MGP_129S1SvImJ_G0027026.1 mouse_genomes_project 2 188094812 188116082 + MGP_129S1SvImJ_P0059894 Tpd52l2 protein_coding protein_coding MGP_129S1SvImJ_T0059895.1 MGP_129S1SvImJ_G0027026.1 mouse_genomes_project 2 188097426 188113751 + MGP_129S1SvImJ_P0059895 Tpd52l2 protein_coding protein_coding MGP_129S1SvImJ_T0059896.1 MGP_129S1SvImJ_G0027026.1 mouse_genomes_project 2 188097447 188100730 + Tpd52l2 protein_coding retained_intron MGP_129S1SvImJ_T0059897.1 MGP_129S1SvImJ_G0027026.1 mouse_genomes_project 2 188113272 188116028 + Tpd52l2 protein_coding retained_intron MGP_129S1SvImJ_T0001108.1 MGP_129S1SvImJ_G0001037.1 mouse_genomes_project 2 68940920 68944693 + TEC TEC MGP_129S1SvImJ_T0004061.1 MGP_129S1SvImJ_G0003608.1 mouse_genomes_project 2 106345487 106349346 + Gm13883 antisense antisense MGP_129S1SvImJ_T0004062.1 MGP_129S1SvImJ_G0003608.1 mouse_genomes_project 2 106345487 106365349 + Gm13883 antisense antisense MGP_129S1SvImJ_T0013461.1 MGP_129S1SvImJ_G0011550.1 mouse_genomes_project 2 17259104 17259332 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017858.1 MGP_129S1SvImJ_G0015451.1 mouse_genomes_project 2 108866611 108867086 - BB218582 processed_transcript processed_transcript MGP_129S1SvImJ_T0017859.1 MGP_129S1SvImJ_G0015451.1 mouse_genomes_project 2 108866614 108874086 - BB218582 processed_transcript processed_transcript MGP_129S1SvImJ_T0017860.1 MGP_129S1SvImJ_G0015451.1 mouse_genomes_project 2 108870905 108874056 - BB218582 processed_transcript processed_transcript MGP_129S1SvImJ_T0053831.1 MGP_129S1SvImJ_G0025567.1 mouse_genomes_project 2 28617244 28625491 + MGP_129S1SvImJ_P0053831 Dolpp1 protein_coding protein_coding MGP_129S1SvImJ_T0053832.1 MGP_129S1SvImJ_G0025567.1 mouse_genomes_project 2 28617406 28625489 + MGP_129S1SvImJ_P0053832 Dolpp1 protein_coding protein_coding MGP_129S1SvImJ_T0053833.1 MGP_129S1SvImJ_G0025567.1 mouse_genomes_project 2 28617406 28625489 + MGP_129S1SvImJ_P0053833 Dolpp1 protein_coding protein_coding MGP_129S1SvImJ_T0053834.1 MGP_129S1SvImJ_G0025567.1 mouse_genomes_project 2 28617418 28622286 + Dolpp1 protein_coding retained_intron MGP_129S1SvImJ_T0053835.1 MGP_129S1SvImJ_G0025567.1 mouse_genomes_project 2 28617420 28620894 + Dolpp1 protein_coding retained_intron MGP_129S1SvImJ_T0053836.1 MGP_129S1SvImJ_G0025567.1 mouse_genomes_project 2 28617429 28625490 + MGP_129S1SvImJ_P0053836 Dolpp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053837.1 MGP_129S1SvImJ_G0025567.1 mouse_genomes_project 2 28617430 28621139 + Dolpp1 protein_coding retained_intron MGP_129S1SvImJ_T0053838.1 MGP_129S1SvImJ_G0025567.1 mouse_genomes_project 2 28617435 28624650 + MGP_129S1SvImJ_P0053838 Dolpp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0053839.1 MGP_129S1SvImJ_G0025567.1 mouse_genomes_project 2 28617444 28622778 + Dolpp1 protein_coding retained_intron MGP_129S1SvImJ_T0053840.1 MGP_129S1SvImJ_G0025567.1 mouse_genomes_project 2 28620580 28625489 + Dolpp1 protein_coding processed_transcript MGP_129S1SvImJ_T0053841.1 MGP_129S1SvImJ_G0025567.1 mouse_genomes_project 2 28622391 28624950 + Dolpp1 protein_coding processed_transcript MGP_129S1SvImJ_T0054751.1 MGP_129S1SvImJ_G0025730.1 mouse_genomes_project 2 51245318 51273140 - MGP_129S1SvImJ_P0054751 Nmi protein_coding protein_coding MGP_129S1SvImJ_T0054752.1 MGP_129S1SvImJ_G0025730.1 mouse_genomes_project 2 51245332 51272922 - MGP_129S1SvImJ_P0054752 Nmi protein_coding protein_coding MGP_129S1SvImJ_T0054753.1 MGP_129S1SvImJ_G0025730.1 mouse_genomes_project 2 51245336 51272934 - MGP_129S1SvImJ_P0054753 Nmi protein_coding protein_coding MGP_129S1SvImJ_T0054754.1 MGP_129S1SvImJ_G0025730.1 mouse_genomes_project 2 51245356 51249284 - MGP_129S1SvImJ_P0054754 Nmi protein_coding protein_coding MGP_129S1SvImJ_T0054755.1 MGP_129S1SvImJ_G0025730.1 mouse_genomes_project 2 51253578 51273397 - MGP_129S1SvImJ_P0054755 Nmi protein_coding protein_coding MGP_129S1SvImJ_T0054756.1 MGP_129S1SvImJ_G0025730.1 mouse_genomes_project 2 51257858 51272890 - Nmi protein_coding retained_intron MGP_129S1SvImJ_T0007372.1 MGP_129S1SvImJ_G0006047.1 mouse_genomes_project 2 159899400 159901690 - 2310005A03Rik lincRNA lincRNA MGP_129S1SvImJ_T0013726.1 MGP_129S1SvImJ_G0011815.1 mouse_genomes_project 2 111025550 111026541 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007262.1 MGP_129S1SvImJ_G0005958.1 mouse_genomes_project 2 85945985 85956834 + Gm13715 lincRNA lincRNA MGP_129S1SvImJ_T0056847.1 MGP_129S1SvImJ_G0026330.1 mouse_genomes_project 2 121778641 121800786 + MGP_129S1SvImJ_P0056847 Casc5 protein_coding protein_coding MGP_129S1SvImJ_T0056848.1 MGP_129S1SvImJ_G0026330.1 mouse_genomes_project 2 121778641 121836724 + MGP_129S1SvImJ_P0056848 Casc5 protein_coding protein_coding MGP_129S1SvImJ_T0056849.1 MGP_129S1SvImJ_G0026330.1 mouse_genomes_project 2 121778669 121797484 + MGP_129S1SvImJ_P0056849 Casc5 protein_coding protein_coding MGP_129S1SvImJ_T0056850.1 MGP_129S1SvImJ_G0026330.1 mouse_genomes_project 2 121778672 121804433 + MGP_129S1SvImJ_P0056850 Casc5 protein_coding protein_coding MGP_129S1SvImJ_T0056851.1 MGP_129S1SvImJ_G0026330.1 mouse_genomes_project 2 121788751 121838100 + MGP_129S1SvImJ_P0056851 Casc5 protein_coding protein_coding MGP_129S1SvImJ_T0004185.1 MGP_129S1SvImJ_G0003697.1 mouse_genomes_project 2 171008339 171016564 + Gm14437 antisense antisense MGP_129S1SvImJ_T0056644.1 MGP_129S1SvImJ_G0026259.1 mouse_genomes_project 2 113744436 113754826 - MGP_129S1SvImJ_P0056644 Olfr1282 protein_coding protein_coding MGP_129S1SvImJ_T0011519.1 MGP_129S1SvImJ_G0009635.1 mouse_genomes_project 2 44363041 44363242 + Vis1 misc_RNA misc_RNA MGP_129S1SvImJ_T0052826.1 MGP_129S1SvImJ_G0025387.1 mouse_genomes_project 2 18996317 19022069 - MGP_129S1SvImJ_P0052826 Enkur protein_coding protein_coding MGP_129S1SvImJ_T0052827.1 MGP_129S1SvImJ_G0025387.1 mouse_genomes_project 2 19010805 19021943 - Enkur protein_coding processed_transcript MGP_129S1SvImJ_T0052828.1 MGP_129S1SvImJ_G0025387.1 mouse_genomes_project 2 19013161 19022056 - Enkur protein_coding processed_transcript MGP_129S1SvImJ_T0013426.1 MGP_129S1SvImJ_G0011515.1 mouse_genomes_project 2 2719671 2720263 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053796.1 MGP_129S1SvImJ_G0025562.1 mouse_genomes_project 2 28499395 28521151 + MGP_129S1SvImJ_P0053796 Gm28038 protein_coding protein_coding MGP_129S1SvImJ_T0053074.1 MGP_129S1SvImJ_G0025434.1 mouse_genomes_project 2 23138924 23140296 - Ssna1 protein_coding processed_transcript MGP_129S1SvImJ_T0053075.1 MGP_129S1SvImJ_G0025434.1 mouse_genomes_project 2 23138924 23140302 - MGP_129S1SvImJ_P0053075 Ssna1 protein_coding protein_coding MGP_129S1SvImJ_T0053076.1 MGP_129S1SvImJ_G0025434.1 mouse_genomes_project 2 23138971 23140324 - Ssna1 protein_coding processed_transcript MGP_129S1SvImJ_T0053077.1 MGP_129S1SvImJ_G0025434.1 mouse_genomes_project 2 23139591 23140290 - Ssna1 protein_coding processed_transcript MGP_129S1SvImJ_T0054637.1 MGP_129S1SvImJ_G0025715.1 mouse_genomes_project 2 42539708 42547839 + Kynu protein_coding processed_transcript MGP_129S1SvImJ_T0054638.1 MGP_129S1SvImJ_G0025715.1 mouse_genomes_project 2 42539708 42674927 + MGP_129S1SvImJ_P0054638 Kynu protein_coding protein_coding MGP_129S1SvImJ_T0054639.1 MGP_129S1SvImJ_G0025715.1 mouse_genomes_project 2 42539721 42670709 + MGP_129S1SvImJ_P0054639 Kynu protein_coding protein_coding MGP_129S1SvImJ_T0054640.1 MGP_129S1SvImJ_G0025715.1 mouse_genomes_project 2 42539733 42624950 + MGP_129S1SvImJ_P0054640 Kynu protein_coding protein_coding MGP_129S1SvImJ_T0054641.1 MGP_129S1SvImJ_G0025715.1 mouse_genomes_project 2 42586976 42593571 + Kynu protein_coding processed_transcript MGP_129S1SvImJ_T0054642.1 MGP_129S1SvImJ_G0025715.1 mouse_genomes_project 2 42661470 42671917 + Kynu protein_coding processed_transcript MGP_129S1SvImJ_T0001107.1 MGP_129S1SvImJ_G0001036.1 mouse_genomes_project 2 68936430 68937296 + TEC TEC MGP_129S1SvImJ_T0004043.1 MGP_129S1SvImJ_G0003596.1 mouse_genomes_project 2 77118580 77182646 + Gm13938 antisense antisense MGP_129S1SvImJ_T0013618.1 MGP_129S1SvImJ_G0011707.1 mouse_genomes_project 2 77673445 77673858 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0058410.1 MGP_129S1SvImJ_G0026695.1 mouse_genomes_project 2 158285932 158303287 - MGP_129S1SvImJ_P0058410 Commd7 protein_coding protein_coding MGP_129S1SvImJ_T0058411.1 MGP_129S1SvImJ_G0026695.1 mouse_genomes_project 2 158287729 158303237 - Commd7 protein_coding retained_intron MGP_129S1SvImJ_T0058412.1 MGP_129S1SvImJ_G0026695.1 mouse_genomes_project 2 158287729 158303246 - MGP_129S1SvImJ_P0058412 Commd7 protein_coding protein_coding MGP_129S1SvImJ_T0058972.1 MGP_129S1SvImJ_G0026806.1 mouse_genomes_project 2 165932387 165963587 + MGP_129S1SvImJ_P0058972 Plcg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058973.1 MGP_129S1SvImJ_G0026806.1 mouse_genomes_project 2 165932397 165976874 + MGP_129S1SvImJ_P0058973 Plcg1 protein_coding protein_coding MGP_129S1SvImJ_T0058974.1 MGP_129S1SvImJ_G0026806.1 mouse_genomes_project 2 165932786 165948973 + MGP_129S1SvImJ_P0058974 Plcg1 protein_coding protein_coding MGP_129S1SvImJ_T0058975.1 MGP_129S1SvImJ_G0026806.1 mouse_genomes_project 2 165932820 165964371 + MGP_129S1SvImJ_P0058975 Plcg1 protein_coding protein_coding MGP_129S1SvImJ_T0058976.1 MGP_129S1SvImJ_G0026806.1 mouse_genomes_project 2 165942097 165963591 + Plcg1 protein_coding processed_transcript MGP_129S1SvImJ_T0058978.1 MGP_129S1SvImJ_G0026806.1 mouse_genomes_project 2 165953571 165963240 + Plcg1 protein_coding retained_intron MGP_129S1SvImJ_T0058979.1 MGP_129S1SvImJ_G0026806.1 mouse_genomes_project 2 165953636 165959992 + Plcg1 protein_coding retained_intron MGP_129S1SvImJ_T0058980.1 MGP_129S1SvImJ_G0026806.1 mouse_genomes_project 2 165955151 165955949 + Plcg1 protein_coding retained_intron MGP_129S1SvImJ_T0058981.1 MGP_129S1SvImJ_G0026806.1 mouse_genomes_project 2 165955631 165956254 + Plcg1 protein_coding retained_intron MGP_129S1SvImJ_T0058982.1 MGP_129S1SvImJ_G0026806.1 mouse_genomes_project 2 165955656 165960532 + Plcg1 protein_coding processed_transcript MGP_129S1SvImJ_T0058983.1 MGP_129S1SvImJ_G0026806.1 mouse_genomes_project 2 165955990 165958232 + Plcg1 protein_coding retained_intron MGP_129S1SvImJ_T0058984.1 MGP_129S1SvImJ_G0026806.1 mouse_genomes_project 2 165961202 165963302 + MGP_129S1SvImJ_P0058984 Plcg1 protein_coding protein_coding MGP_129S1SvImJ_T0010483.1 MGP_129S1SvImJ_G0008599.1 mouse_genomes_project 2 157453989 157454049 + Mir5622 miRNA miRNA MGP_129S1SvImJ_T0059201.1 MGP_129S1SvImJ_G0026878.1 mouse_genomes_project 2 170335702 170338428 - MGP_129S1SvImJ_P0059201 Neurl2 protein_coding protein_coding MGP_129S1SvImJ_T0057629.1 MGP_129S1SvImJ_G0026496.1 mouse_genomes_project 2 133637745 133711666 + MGP_129S1SvImJ_P0057629 Tmc2 protein_coding protein_coding MGP_129S1SvImJ_T0057630.1 MGP_129S1SvImJ_G0026496.1 mouse_genomes_project 2 133639094 133711438 + MGP_129S1SvImJ_P0057630 Tmc2 protein_coding protein_coding MGP_129S1SvImJ_T0013504.1 MGP_129S1SvImJ_G0011593.1 mouse_genomes_project 2 35751931 35757474 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004047.1 MGP_129S1SvImJ_G0003599.1 mouse_genomes_project 2 84354301 84354761 - Gm13686 antisense antisense MGP_129S1SvImJ_T0017916.1 MGP_129S1SvImJ_G0015477.1 mouse_genomes_project 2 155119894 155121336 + E130215H24Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0057619.1 MGP_129S1SvImJ_G0026492.1 mouse_genomes_project 2 133213389 133243638 + MGP_129S1SvImJ_P0057619 Stk35 protein_coding protein_coding MGP_129S1SvImJ_T0057620.1 MGP_129S1SvImJ_G0026492.1 mouse_genomes_project 2 133213389 133246960 + MGP_129S1SvImJ_P0057620 Stk35 protein_coding protein_coding MGP_129S1SvImJ_T0052842.1 MGP_129S1SvImJ_G0025391.1 mouse_genomes_project 2 20333509 20409496 + MGP_129S1SvImJ_P0052842 Gad2 protein_coding protein_coding MGP_129S1SvImJ_T0052843.1 MGP_129S1SvImJ_G0025391.1 mouse_genomes_project 2 20334612 20341310 + Gad2 protein_coding processed_transcript MGP_129S1SvImJ_T0010393.1 MGP_129S1SvImJ_G0008509.1 mouse_genomes_project 2 17647238 17647314 + Gm44457 miRNA miRNA MGP_129S1SvImJ_T0017810.1 MGP_129S1SvImJ_G0015421.1 mouse_genomes_project 2 56730775 56733057 - A930012O16Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017811.1 MGP_129S1SvImJ_G0015421.1 mouse_genomes_project 2 56730775 56733057 - A930012O16Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0055798.1 MGP_129S1SvImJ_G0026004.1 mouse_genomes_project 2 88386897 88387842 + MGP_129S1SvImJ_P0055798 Olfr1120 protein_coding protein_coding MGP_129S1SvImJ_T0058461.1 MGP_129S1SvImJ_G0026713.1 mouse_genomes_project 2 159069482 159103424 - MGP_129S1SvImJ_P0058461 Cdk5rap1 protein_coding protein_coding MGP_129S1SvImJ_T0058462.1 MGP_129S1SvImJ_G0026713.1 mouse_genomes_project 2 159069488 159103133 - MGP_129S1SvImJ_P0058462 Cdk5rap1 protein_coding protein_coding MGP_129S1SvImJ_T0058463.1 MGP_129S1SvImJ_G0026713.1 mouse_genomes_project 2 159076379 159103175 - Cdk5rap1 protein_coding processed_transcript MGP_129S1SvImJ_T0058464.1 MGP_129S1SvImJ_G0026713.1 mouse_genomes_project 2 159085860 159089598 - Cdk5rap1 protein_coding retained_intron MGP_129S1SvImJ_T0058465.1 MGP_129S1SvImJ_G0026713.1 mouse_genomes_project 2 159091252 159103145 - MGP_129S1SvImJ_P0058465 Cdk5rap1 protein_coding protein_coding MGP_129S1SvImJ_T0058466.1 MGP_129S1SvImJ_G0026713.1 mouse_genomes_project 2 159096249 159101200 - Cdk5rap1 protein_coding processed_transcript MGP_129S1SvImJ_T0058467.1 MGP_129S1SvImJ_G0026713.1 mouse_genomes_project 2 159101092 159103105 - Cdk5rap1 protein_coding processed_transcript MGP_129S1SvImJ_T0057515.1 MGP_129S1SvImJ_G0026464.1 mouse_genomes_project 2 130879874 130899482 + MGP_129S1SvImJ_P0057515 Mrps5 protein_coding protein_coding MGP_129S1SvImJ_T0057516.1 MGP_129S1SvImJ_G0026464.1 mouse_genomes_project 2 130880071 130897175 + Mrps5 protein_coding retained_intron MGP_129S1SvImJ_T0057517.1 MGP_129S1SvImJ_G0026464.1 mouse_genomes_project 2 130880071 130888710 + Mrps5 protein_coding retained_intron MGP_129S1SvImJ_T0057518.1 MGP_129S1SvImJ_G0026464.1 mouse_genomes_project 2 130883093 130888348 + MGP_129S1SvImJ_P0057518 Mrps5 protein_coding protein_coding MGP_129S1SvImJ_T0057519.1 MGP_129S1SvImJ_G0026464.1 mouse_genomes_project 2 130888325 130891029 + Mrps5 protein_coding retained_intron MGP_129S1SvImJ_T0057520.1 MGP_129S1SvImJ_G0026464.1 mouse_genomes_project 2 130892478 130896508 + Mrps5 protein_coding retained_intron MGP_129S1SvImJ_T0057521.1 MGP_129S1SvImJ_G0026464.1 mouse_genomes_project 2 130892685 130893898 + Mrps5 protein_coding retained_intron MGP_129S1SvImJ_T0059304.1 MGP_129S1SvImJ_G0026896.1 mouse_genomes_project 2 171069824 171083804 + MGP_129S1SvImJ_P0059304 Slc2a10 protein_coding protein_coding MGP_129S1SvImJ_T0059305.1 MGP_129S1SvImJ_G0026896.1 mouse_genomes_project 2 171072930 171078644 + Slc2a10 protein_coding processed_transcript MGP_129S1SvImJ_T0053239.1 MGP_129S1SvImJ_G0025462.1 mouse_genomes_project 2 23568162 23571260 + MGP_129S1SvImJ_P0053239 Lcn8 protein_coding protein_coding MGP_129S1SvImJ_T0011511.1 MGP_129S1SvImJ_G0009627.1 mouse_genomes_project 2 21591816 21591991 + Gm26323 misc_RNA misc_RNA MGP_129S1SvImJ_T0013527.1 MGP_129S1SvImJ_G0011616.1 mouse_genomes_project 2 44415962 44416196 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010384.1 MGP_129S1SvImJ_G0008500.1 mouse_genomes_project 2 7877102 7877223 + Mir466l miRNA miRNA MGP_129S1SvImJ_T0054115.1 MGP_129S1SvImJ_G0025604.1 mouse_genomes_project 2 30827109 30831874 - MGP_129S1SvImJ_P0054115 1110008P14Rik protein_coding protein_coding MGP_129S1SvImJ_T0054116.1 MGP_129S1SvImJ_G0025604.1 mouse_genomes_project 2 30829112 30831950 - MGP_129S1SvImJ_P0054116 1110008P14Rik protein_coding protein_coding MGP_129S1SvImJ_T0057124.1 MGP_129S1SvImJ_G0026380.1 mouse_genomes_project 2 123976712 123992612 - MGP_129S1SvImJ_P0057124 Tgm7 protein_coding protein_coding MGP_129S1SvImJ_T0013623.1 MGP_129S1SvImJ_G0011712.1 mouse_genomes_project 2 79083533 79084790 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007215.1 MGP_129S1SvImJ_G0005918.1 mouse_genomes_project 2 54878289 54882636 - Gm26794 lincRNA lincRNA MGP_129S1SvImJ_T0010421.1 MGP_129S1SvImJ_G0008537.1 mouse_genomes_project 2 31199497 31199570 - Mir3960 miRNA miRNA MGP_129S1SvImJ_T0100953.1 MGP_129S1SvImJ_G0039020.1 mouse_genomes_project 2 96179040 96179171 + Gm24318 snoRNA snoRNA MGP_129S1SvImJ_T0013595.1 MGP_129S1SvImJ_G0011684.1 mouse_genomes_project 2 68747024 68747537 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013675.1 MGP_129S1SvImJ_G0011764.1 mouse_genomes_project 2 92991235 92991473 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007152.1 MGP_129S1SvImJ_G0005871.1 mouse_genomes_project 2 14794651 14798396 - Gm13322 lincRNA lincRNA MGP_129S1SvImJ_T0004089.1 MGP_129S1SvImJ_G0003626.1 mouse_genomes_project 2 124827665 124828603 - Gm14019 antisense antisense MGP_129S1SvImJ_T0053230.1 MGP_129S1SvImJ_G0025460.1 mouse_genomes_project 2 23530757 23532676 - MGP_129S1SvImJ_P0053230 Tmem141 protein_coding protein_coding MGP_129S1SvImJ_T0053231.1 MGP_129S1SvImJ_G0025460.1 mouse_genomes_project 2 23530757 23532696 - MGP_129S1SvImJ_P0053231 Tmem141 protein_coding protein_coding MGP_129S1SvImJ_T0053232.1 MGP_129S1SvImJ_G0025460.1 mouse_genomes_project 2 23530794 23532654 - Tmem141 protein_coding processed_transcript MGP_129S1SvImJ_T0053233.1 MGP_129S1SvImJ_G0025460.1 mouse_genomes_project 2 23531017 23532471 - Tmem141 protein_coding processed_transcript MGP_129S1SvImJ_T0053234.1 MGP_129S1SvImJ_G0025460.1 mouse_genomes_project 2 23531737 23532662 - Tmem141 protein_coding processed_transcript MGP_129S1SvImJ_T0053235.1 MGP_129S1SvImJ_G0025460.1 mouse_genomes_project 2 23531737 23532659 - Tmem141 protein_coding processed_transcript MGP_129S1SvImJ_T0053236.1 MGP_129S1SvImJ_G0025460.1 mouse_genomes_project 2 23532184 23532598 - Tmem141 protein_coding processed_transcript MGP_129S1SvImJ_T0013769.1 MGP_129S1SvImJ_G0011858.1 mouse_genomes_project 2 132754559 132754660 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059182.1 MGP_129S1SvImJ_G0026872.1 mouse_genomes_project 2 170274976 170277557 - MGP_129S1SvImJ_P0059182 Tnnc2 protein_coding protein_coding MGP_129S1SvImJ_T0059183.1 MGP_129S1SvImJ_G0026872.1 mouse_genomes_project 2 170275759 170277783 - Tnnc2 protein_coding processed_transcript MGP_129S1SvImJ_T0054507.1 MGP_129S1SvImJ_G0025690.1 mouse_genomes_project 2 35893186 35894116 + MGP_129S1SvImJ_P0054507 Olfr366 protein_coding protein_coding MGP_129S1SvImJ_T0099684.1 MGP_129S1SvImJ_G0037751.1 mouse_genomes_project 2 86668724 86668904 - Gm24037 snRNA snRNA MGP_129S1SvImJ_T0003964.1 MGP_129S1SvImJ_G0003539.1 mouse_genomes_project 2 29990703 29997840 - Gm13425 antisense antisense MGP_129S1SvImJ_T0056050.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92443788 92489437 - MGP_129S1SvImJ_P0056050 Madd protein_coding protein_coding MGP_129S1SvImJ_T0056051.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92443788 92485910 - MGP_129S1SvImJ_P0056051 Madd protein_coding protein_coding MGP_129S1SvImJ_T0056052.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92443788 92490454 - MGP_129S1SvImJ_P0056052 Madd protein_coding protein_coding MGP_129S1SvImJ_T0056053.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92443788 92490454 - MGP_129S1SvImJ_P0056053 Madd protein_coding protein_coding MGP_129S1SvImJ_T0056054.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92443788 92490454 - MGP_129S1SvImJ_P0056054 Madd protein_coding protein_coding MGP_129S1SvImJ_T0056055.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92443788 92485915 - MGP_129S1SvImJ_P0056055 Madd protein_coding protein_coding MGP_129S1SvImJ_T0056056.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92443788 92485904 - MGP_129S1SvImJ_P0056056 Madd protein_coding protein_coding MGP_129S1SvImJ_T0056057.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92443788 92490454 - MGP_129S1SvImJ_P0056057 Madd protein_coding protein_coding MGP_129S1SvImJ_T0056058.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92443788 92489478 - MGP_129S1SvImJ_P0056058 Madd protein_coding protein_coding MGP_129S1SvImJ_T0056059.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92443788 92489477 - MGP_129S1SvImJ_P0056059 Madd protein_coding protein_coding MGP_129S1SvImJ_T0056060.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92443788 92490454 - MGP_129S1SvImJ_P0056060 Madd protein_coding protein_coding MGP_129S1SvImJ_T0056061.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92443788 92485906 - MGP_129S1SvImJ_P0056061 Madd protein_coding protein_coding MGP_129S1SvImJ_T0056062.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92443789 92490454 - Madd protein_coding processed_transcript MGP_129S1SvImJ_T0056063.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92443789 92490454 - Madd protein_coding processed_transcript MGP_129S1SvImJ_T0056064.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92443789 92490454 - Madd protein_coding processed_transcript MGP_129S1SvImJ_T0056065.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92443789 92490454 - Madd protein_coding processed_transcript MGP_129S1SvImJ_T0056066.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92443789 92490454 - Madd protein_coding processed_transcript MGP_129S1SvImJ_T0056067.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92443789 92490454 - MGP_129S1SvImJ_P0056067 Madd protein_coding protein_coding MGP_129S1SvImJ_T0056068.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92444776 92445683 - Madd protein_coding retained_intron MGP_129S1SvImJ_T0056069.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92449456 92461382 - Madd protein_coding retained_intron MGP_129S1SvImJ_T0056070.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92449685 92458922 - Madd protein_coding retained_intron MGP_129S1SvImJ_T0056071.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92458577 92461226 - Madd protein_coding retained_intron MGP_129S1SvImJ_T0056072.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92461988 92466788 - Madd protein_coding retained_intron MGP_129S1SvImJ_T0056073.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92467476 92489615 - Madd protein_coding retained_intron MGP_129S1SvImJ_T0056074.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92467823 92489636 - MGP_129S1SvImJ_P0056074 Madd protein_coding protein_coding MGP_129S1SvImJ_T0056075.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92474246 92482287 - MGP_129S1SvImJ_P0056075 Madd protein_coding protein_coding MGP_129S1SvImJ_T0056076.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92484225 92490473 - Madd protein_coding retained_intron MGP_129S1SvImJ_T0056077.1 MGP_129S1SvImJ_G0026143.1 mouse_genomes_project 2 92485037 92489628 - Madd protein_coding processed_transcript MGP_129S1SvImJ_T0053483.1 MGP_129S1SvImJ_G0025510.1 mouse_genomes_project 2 25081589 25114684 - MGP_129S1SvImJ_P0053483 Fam163b protein_coding protein_coding MGP_129S1SvImJ_T0055780.1 MGP_129S1SvImJ_G0025987.1 mouse_genomes_project 2 87896261 87898319 - MGP_129S1SvImJ_P0055780 protein_coding protein_coding MGP_129S1SvImJ_T0055781.1 MGP_129S1SvImJ_G0025987.1 mouse_genomes_project 2 87896261 87897498 - MGP_129S1SvImJ_P0055781 protein_coding protein_coding MGP_129S1SvImJ_T0101888.1 MGP_129S1SvImJ_G0039813.1 mouse_genomes_project 2 89319063 89319905 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0053352.1 MGP_129S1SvImJ_G0025487.1 mouse_genomes_project 2 24338675 24346459 + MGP_129S1SvImJ_P0053352 Pmpca protein_coding protein_coding MGP_129S1SvImJ_T0053353.1 MGP_129S1SvImJ_G0025487.1 mouse_genomes_project 2 24338684 24343278 + MGP_129S1SvImJ_P0053353 Pmpca protein_coding protein_coding MGP_129S1SvImJ_T0053354.1 MGP_129S1SvImJ_G0025487.1 mouse_genomes_project 2 24338690 24339632 + Pmpca protein_coding processed_transcript MGP_129S1SvImJ_T0053355.1 MGP_129S1SvImJ_G0025487.1 mouse_genomes_project 2 24338690 24339539 + Pmpca protein_coding processed_transcript MGP_129S1SvImJ_T0053356.1 MGP_129S1SvImJ_G0025487.1 mouse_genomes_project 2 24338692 24341303 + Pmpca protein_coding processed_transcript MGP_129S1SvImJ_T0053357.1 MGP_129S1SvImJ_G0025487.1 mouse_genomes_project 2 24340263 24341735 + Pmpca protein_coding processed_transcript MGP_129S1SvImJ_T0003968.1 MGP_129S1SvImJ_G0003543.1 mouse_genomes_project 2 30417938 30418639 - Gm13609 antisense antisense MGP_129S1SvImJ_T0058142.1 MGP_129S1SvImJ_G0026611.1 mouse_genomes_project 2 153042135 153084072 - MGP_129S1SvImJ_P0058142 Napb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058143.1 MGP_129S1SvImJ_G0026611.1 mouse_genomes_project 2 153042135 153084126 - MGP_129S1SvImJ_P0058143 Napb protein_coding protein_coding MGP_129S1SvImJ_T0058144.1 MGP_129S1SvImJ_G0026611.1 mouse_genomes_project 2 153054565 153084050 - Napb protein_coding retained_intron MGP_129S1SvImJ_T0010357.1 MGP_129S1SvImJ_G0008473.1 mouse_genomes_project 2 7824680 7824801 + Mir669d miRNA miRNA MGP_129S1SvImJ_T0057561.1 MGP_129S1SvImJ_G0026475.1 mouse_genomes_project 2 132054388 132160505 + MGP_129S1SvImJ_P0057561 Mertk protein_coding protein_coding MGP_129S1SvImJ_T0057562.1 MGP_129S1SvImJ_G0026475.1 mouse_genomes_project 2 132128629 132160290 + Mertk protein_coding processed_transcript MGP_129S1SvImJ_T0013556.1 MGP_129S1SvImJ_G0011645.1 mouse_genomes_project 2 55231487 55232750 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013632.1 MGP_129S1SvImJ_G0011721.1 mouse_genomes_project 2 81136760 81137445 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013546.1 MGP_129S1SvImJ_G0011635.1 mouse_genomes_project 2 51236932 51237469 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010375.1 MGP_129S1SvImJ_G0008491.1 mouse_genomes_project 2 7868567 7868665 + Gm22239 miRNA miRNA MGP_129S1SvImJ_T0056614.1 MGP_129S1SvImJ_G0026243.1 mouse_genomes_project 2 112381958 112405258 + MGP_129S1SvImJ_P0056614 Ccdc34 protein_coding protein_coding MGP_129S1SvImJ_T0056615.1 MGP_129S1SvImJ_G0026243.1 mouse_genomes_project 2 112382103 112519645 + MGP_129S1SvImJ_P0056615 Ccdc34 protein_coding protein_coding MGP_129S1SvImJ_T0056616.1 MGP_129S1SvImJ_G0026243.1 mouse_genomes_project 2 112382121 112405264 + MGP_129S1SvImJ_P0056616 Ccdc34 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0056617.1 MGP_129S1SvImJ_G0026243.1 mouse_genomes_project 2 112386114 112401205 + Ccdc34 protein_coding retained_intron MGP_129S1SvImJ_T0056618.1 MGP_129S1SvImJ_G0026243.1 mouse_genomes_project 2 112397968 112404791 + Ccdc34 protein_coding retained_intron MGP_129S1SvImJ_T0056619.1 MGP_129S1SvImJ_G0026243.1 mouse_genomes_project 2 112400836 112404606 + Ccdc34 protein_coding retained_intron MGP_129S1SvImJ_T0003922.1 MGP_129S1SvImJ_G0003507.1 mouse_genomes_project 2 12232831 12265731 - Gm10848 antisense antisense MGP_129S1SvImJ_T0001049.1 MGP_129S1SvImJ_G0000978.1 mouse_genomes_project 2 8559499 8560418 + TEC TEC MGP_129S1SvImJ_T0007131.1 MGP_129S1SvImJ_G0005854.1 mouse_genomes_project 2 1161135 1169003 + Gm13189 lincRNA lincRNA MGP_129S1SvImJ_T0057998.1 MGP_129S1SvImJ_G0026575.1 mouse_genomes_project 2 147089826 147093067 + MGP_129S1SvImJ_P0057998 Otor protein_coding protein_coding MGP_129S1SvImJ_T0098352.1 MGP_129S1SvImJ_G0036437.1 mouse_genomes_project 2 92204532 92204805 + pseudogene pseudogene MGP_129S1SvImJ_T0057511.1 MGP_129S1SvImJ_G0026463.1 mouse_genomes_project 2 130867308 130879747 - MGP_129S1SvImJ_P0057511 Zfp661 protein_coding protein_coding MGP_129S1SvImJ_T0057512.1 MGP_129S1SvImJ_G0026463.1 mouse_genomes_project 2 130868179 130877311 - MGP_129S1SvImJ_P0057512 Zfp661 protein_coding protein_coding MGP_129S1SvImJ_T0057513.1 MGP_129S1SvImJ_G0026463.1 mouse_genomes_project 2 130868186 130877319 - MGP_129S1SvImJ_P0057513 Zfp661 protein_coding protein_coding MGP_129S1SvImJ_T0057514.1 MGP_129S1SvImJ_G0026463.1 mouse_genomes_project 2 130869581 130874149 - MGP_129S1SvImJ_P0057514 Zfp661 protein_coding protein_coding MGP_129S1SvImJ_T0010379.1 MGP_129S1SvImJ_G0008495.1 mouse_genomes_project 2 7874750 7874844 + Mir466n miRNA miRNA MGP_129S1SvImJ_T0059729.1 MGP_129S1SvImJ_G0026998.1 mouse_genomes_project 2 187129204 187154860 + MGP_129S1SvImJ_P0059729 Col9a3 protein_coding protein_coding MGP_129S1SvImJ_T0059730.1 MGP_129S1SvImJ_G0026998.1 mouse_genomes_project 2 187129636 187154856 + MGP_129S1SvImJ_P0059730 Col9a3 protein_coding protein_coding MGP_129S1SvImJ_T0059731.1 MGP_129S1SvImJ_G0026998.1 mouse_genomes_project 2 187130220 187137848 + Col9a3 protein_coding retained_intron MGP_129S1SvImJ_T0059732.1 MGP_129S1SvImJ_G0026998.1 mouse_genomes_project 2 187135255 187145480 + Col9a3 protein_coding retained_intron MGP_129S1SvImJ_T0059733.1 MGP_129S1SvImJ_G0026998.1 mouse_genomes_project 2 187146179 187153969 + Col9a3 protein_coding retained_intron MGP_129S1SvImJ_T0059734.1 MGP_129S1SvImJ_G0026998.1 mouse_genomes_project 2 187148332 187154273 + Col9a3 protein_coding retained_intron MGP_129S1SvImJ_T0013550.1 MGP_129S1SvImJ_G0011639.1 mouse_genomes_project 2 52798989 52799968 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059555.1 MGP_129S1SvImJ_G0026952.1 mouse_genomes_project 2 179266386 179278398 + MGP_129S1SvImJ_P0059555 Rbm38 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059556.1 MGP_129S1SvImJ_G0026952.1 mouse_genomes_project 2 179266400 179279213 + Rbm38 protein_coding retained_intron MGP_129S1SvImJ_T0059557.1 MGP_129S1SvImJ_G0026952.1 mouse_genomes_project 2 179266527 179278294 + MGP_129S1SvImJ_P0059557 Rbm38 protein_coding protein_coding MGP_129S1SvImJ_T0059558.1 MGP_129S1SvImJ_G0026952.1 mouse_genomes_project 2 179266598 179278135 + MGP_129S1SvImJ_P0059558 Rbm38 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0059559.1 MGP_129S1SvImJ_G0026952.1 mouse_genomes_project 2 179266925 179278194 + MGP_129S1SvImJ_P0059559 Rbm38 protein_coding protein_coding MGP_129S1SvImJ_T0059560.1 MGP_129S1SvImJ_G0026952.1 mouse_genomes_project 2 179267536 179279185 + Rbm38 protein_coding retained_intron MGP_129S1SvImJ_T0003995.1 MGP_129S1SvImJ_G0003564.1 mouse_genomes_project 2 57815950 57827948 + Gm13544 antisense antisense MGP_129S1SvImJ_T0013898.1 MGP_129S1SvImJ_G0011987.1 mouse_genomes_project 2 181541252 181541483 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0056308.1 MGP_129S1SvImJ_G0026180.1 mouse_genomes_project 2 95369802 95383574 - MGP_129S1SvImJ_P0056308 Accsl protein_coding protein_coding MGP_129S1SvImJ_T0056309.1 MGP_129S1SvImJ_G0026180.1 mouse_genomes_project 2 95369803 95371463 - MGP_129S1SvImJ_P0056309 Accsl protein_coding protein_coding MGP_129S1SvImJ_T0056310.1 MGP_129S1SvImJ_G0026180.1 mouse_genomes_project 2 95369808 95371174 - Accsl protein_coding processed_transcript MGP_129S1SvImJ_T0056311.1 MGP_129S1SvImJ_G0026180.1 mouse_genomes_project 2 95375486 95379239 - Accsl protein_coding processed_transcript MGP_129S1SvImJ_T0056312.1 MGP_129S1SvImJ_G0026180.1 mouse_genomes_project 2 95376200 95383574 - Accsl protein_coding processed_transcript MGP_129S1SvImJ_T0056313.1 MGP_129S1SvImJ_G0026180.1 mouse_genomes_project 2 95380297 95383489 - MGP_129S1SvImJ_P0056313 Accsl protein_coding protein_coding MGP_129S1SvImJ_T0056314.1 MGP_129S1SvImJ_G0026180.1 mouse_genomes_project 2 95380297 95383499 - MGP_129S1SvImJ_P0056314 Accsl protein_coding protein_coding MGP_129S1SvImJ_T0056315.1 MGP_129S1SvImJ_G0026180.1 mouse_genomes_project 2 95380449 95383110 - Accsl protein_coding processed_transcript MGP_129S1SvImJ_T0102385.1 MGP_129S1SvImJ_G0040219.1 mouse_genomes_project 2 35002950 35003889 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0052844.1 MGP_129S1SvImJ_G0025392.1 mouse_genomes_project 2 20505828 20571968 + Apbb1ip protein_coding processed_transcript MGP_129S1SvImJ_T0052845.1 MGP_129S1SvImJ_G0025392.1 mouse_genomes_project 2 20506102 20611852 + MGP_129S1SvImJ_P0052845 Apbb1ip protein_coding protein_coding MGP_129S1SvImJ_T0052846.1 MGP_129S1SvImJ_G0025392.1 mouse_genomes_project 2 20506124 20590957 + Apbb1ip protein_coding processed_transcript MGP_129S1SvImJ_T0052847.1 MGP_129S1SvImJ_G0025392.1 mouse_genomes_project 2 20506179 20564401 + Apbb1ip protein_coding retained_intron MGP_129S1SvImJ_T0055829.1 MGP_129S1SvImJ_G0026026.1 mouse_genomes_project 2 88848753 88849704 + MGP_129S1SvImJ_P0055829 Olfr152 protein_coding protein_coding MGP_129S1SvImJ_T0055830.1 MGP_129S1SvImJ_G0026026.1 mouse_genomes_project 2 88848759 88849704 + MGP_129S1SvImJ_P0055830 Olfr152 protein_coding protein_coding MGP_129S1SvImJ_T0057273.1 MGP_129S1SvImJ_G0026404.1 mouse_genomes_project 2 125032330 125100353 - MGP_129S1SvImJ_P0057273 Spg11 protein_coding protein_coding MGP_129S1SvImJ_T0057274.1 MGP_129S1SvImJ_G0026404.1 mouse_genomes_project 2 125074364 125100263 - Spg11 protein_coding processed_transcript MGP_129S1SvImJ_T0057275.1 MGP_129S1SvImJ_G0026404.1 mouse_genomes_project 2 125089381 125100342 - Spg11 protein_coding processed_transcript MGP_129S1SvImJ_T0057689.1 MGP_129S1SvImJ_G0026509.1 mouse_genomes_project 2 134046636 134048571 - MGP_129S1SvImJ_P0057689 Avp protein_coding protein_coding MGP_129S1SvImJ_T0013492.1 MGP_129S1SvImJ_G0011581.1 mouse_genomes_project 2 31837814 31840098 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011516.1 MGP_129S1SvImJ_G0009632.1 mouse_genomes_project 2 44188580 44188711 + Gm27761 misc_RNA misc_RNA MGP_129S1SvImJ_T0052547.1 MGP_129S1SvImJ_G0025344.1 mouse_genomes_project 2 9003072 9021366 - MGP_129S1SvImJ_P0052547 Rbm17 protein_coding protein_coding MGP_129S1SvImJ_T0052548.1 MGP_129S1SvImJ_G0025344.1 mouse_genomes_project 2 9003074 9003626 - Rbm17 protein_coding retained_intron MGP_129S1SvImJ_T0052549.1 MGP_129S1SvImJ_G0025344.1 mouse_genomes_project 2 9003076 9004804 - Rbm17 protein_coding retained_intron MGP_129S1SvImJ_T0052550.1 MGP_129S1SvImJ_G0025344.1 mouse_genomes_project 2 9003260 9021341 - MGP_129S1SvImJ_P0052550 Rbm17 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0052551.1 MGP_129S1SvImJ_G0025344.1 mouse_genomes_project 2 9005026 9007533 - Rbm17 protein_coding retained_intron MGP_129S1SvImJ_T0052552.1 MGP_129S1SvImJ_G0025344.1 mouse_genomes_project 2 9007466 9009410 - Rbm17 protein_coding retained_intron MGP_129S1SvImJ_T0052553.1 MGP_129S1SvImJ_G0025344.1 mouse_genomes_project 2 9014785 9022260 - MGP_129S1SvImJ_P0052553 Rbm17 protein_coding protein_coding MGP_129S1SvImJ_T0010348.1 MGP_129S1SvImJ_G0008464.1 mouse_genomes_project 2 6531300 6531377 - Gm23963 miRNA miRNA MGP_129S1SvImJ_T0055752.1 MGP_129S1SvImJ_G0025960.1 mouse_genomes_project 2 87031708 87032656 - MGP_129S1SvImJ_P0055752 Olfr1045 protein_coding protein_coding MGP_129S1SvImJ_T0013874.1 MGP_129S1SvImJ_G0011963.1 mouse_genomes_project 2 170124282 170124538 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053478.1 MGP_129S1SvImJ_G0025509.1 mouse_genomes_project 2 25050392 25080193 + MGP_129S1SvImJ_P0053478 Adamtsl2 protein_coding protein_coding MGP_129S1SvImJ_T0053479.1 MGP_129S1SvImJ_G0025509.1 mouse_genomes_project 2 25068451 25080187 + Adamtsl2 protein_coding retained_intron MGP_129S1SvImJ_T0053480.1 MGP_129S1SvImJ_G0025509.1 mouse_genomes_project 2 25069198 25069814 + Adamtsl2 protein_coding processed_transcript MGP_129S1SvImJ_T0053481.1 MGP_129S1SvImJ_G0025509.1 mouse_genomes_project 2 25074939 25078562 + Adamtsl2 protein_coding retained_intron MGP_129S1SvImJ_T0053482.1 MGP_129S1SvImJ_G0025509.1 mouse_genomes_project 2 25075816 25080193 + Adamtsl2 protein_coding retained_intron MGP_129S1SvImJ_T0007148.1 MGP_129S1SvImJ_G0005867.1 mouse_genomes_project 2 8731420 8789299 - 8030442B05Rik lincRNA lincRNA MGP_129S1SvImJ_T0055112.1 MGP_129S1SvImJ_G0025795.1 mouse_genomes_project 2 69126079 69139613 - MGP_129S1SvImJ_P0055112 Spc25 protein_coding protein_coding MGP_129S1SvImJ_T0055113.1 MGP_129S1SvImJ_G0025795.1 mouse_genomes_project 2 69126605 69139303 - MGP_129S1SvImJ_P0055113 Spc25 protein_coding protein_coding MGP_129S1SvImJ_T0055114.1 MGP_129S1SvImJ_G0025795.1 mouse_genomes_project 2 69129325 69138604 - MGP_129S1SvImJ_P0055114 Spc25 protein_coding protein_coding MGP_129S1SvImJ_T0055115.1 MGP_129S1SvImJ_G0025795.1 mouse_genomes_project 2 69129368 69139636 - MGP_129S1SvImJ_P0055115 Spc25 protein_coding protein_coding MGP_129S1SvImJ_T0055116.1 MGP_129S1SvImJ_G0025795.1 mouse_genomes_project 2 69132126 69139579 - Spc25 protein_coding processed_transcript MGP_129S1SvImJ_T0055117.1 MGP_129S1SvImJ_G0025795.1 mouse_genomes_project 2 69133401 69138689 - Spc25 protein_coding processed_transcript MGP_129S1SvImJ_T0055118.1 MGP_129S1SvImJ_G0025795.1 mouse_genomes_project 2 69139093 69139635 - Spc25 protein_coding processed_transcript MGP_129S1SvImJ_T0053131.1 MGP_129S1SvImJ_G0025444.1 mouse_genomes_project 2 23283675 23290667 + Npdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0053132.1 MGP_129S1SvImJ_G0025444.1 mouse_genomes_project 2 23284793 23292505 + Npdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0053133.1 MGP_129S1SvImJ_G0025444.1 mouse_genomes_project 2 23287397 23295328 + MGP_129S1SvImJ_P0053133 Npdc1 protein_coding protein_coding MGP_129S1SvImJ_T0053134.1 MGP_129S1SvImJ_G0025444.1 mouse_genomes_project 2 23287433 23291175 + Npdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0053135.1 MGP_129S1SvImJ_G0025444.1 mouse_genomes_project 2 23287495 23292174 + MGP_129S1SvImJ_P0053135 Npdc1 protein_coding protein_coding MGP_129S1SvImJ_T0053136.1 MGP_129S1SvImJ_G0025444.1 mouse_genomes_project 2 23287497 23295328 + MGP_129S1SvImJ_P0053136 Npdc1 protein_coding protein_coding MGP_129S1SvImJ_T0053137.1 MGP_129S1SvImJ_G0025444.1 mouse_genomes_project 2 23287520 23292642 + MGP_129S1SvImJ_P0053137 Npdc1 protein_coding protein_coding MGP_129S1SvImJ_T0053138.1 MGP_129S1SvImJ_G0025444.1 mouse_genomes_project 2 23287565 23291438 + Npdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0053139.1 MGP_129S1SvImJ_G0025444.1 mouse_genomes_project 2 23287774 23292330 + Npdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0053140.1 MGP_129S1SvImJ_G0025444.1 mouse_genomes_project 2 23288411 23295325 + Npdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0053141.1 MGP_129S1SvImJ_G0025444.1 mouse_genomes_project 2 23290633 23295328 + MGP_129S1SvImJ_P0053141 Npdc1 protein_coding protein_coding MGP_129S1SvImJ_T0053142.1 MGP_129S1SvImJ_G0025444.1 mouse_genomes_project 2 23291608 23295090 + Npdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0053143.1 MGP_129S1SvImJ_G0025444.1 mouse_genomes_project 2 23292018 23295322 + Npdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0053144.1 MGP_129S1SvImJ_G0025444.1 mouse_genomes_project 2 23294706 23295325 + Npdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0055143.1 MGP_129S1SvImJ_G0025803.1 mouse_genomes_project 2 69705798 69707043 + Ppig protein_coding processed_transcript MGP_129S1SvImJ_T0055144.1 MGP_129S1SvImJ_G0025803.1 mouse_genomes_project 2 69706058 69738327 + MGP_129S1SvImJ_P0055144 Ppig protein_coding protein_coding MGP_129S1SvImJ_T0055145.1 MGP_129S1SvImJ_G0025803.1 mouse_genomes_project 2 69706107 69716678 + Ppig protein_coding processed_transcript MGP_129S1SvImJ_T0055146.1 MGP_129S1SvImJ_G0025803.1 mouse_genomes_project 2 69706156 69715713 + Ppig protein_coding processed_transcript MGP_129S1SvImJ_T0055147.1 MGP_129S1SvImJ_G0025803.1 mouse_genomes_project 2 69706346 69738327 + MGP_129S1SvImJ_P0055147 Ppig protein_coding protein_coding MGP_129S1SvImJ_T0055148.1 MGP_129S1SvImJ_G0025803.1 mouse_genomes_project 2 69706579 69719494 + Ppig protein_coding processed_transcript MGP_129S1SvImJ_T0055149.1 MGP_129S1SvImJ_G0025803.1 mouse_genomes_project 2 69715132 69725910 + Ppig protein_coding processed_transcript MGP_129S1SvImJ_T0055150.1 MGP_129S1SvImJ_G0025803.1 mouse_genomes_project 2 69715380 69716431 + Ppig protein_coding processed_transcript MGP_129S1SvImJ_T0055151.1 MGP_129S1SvImJ_G0025803.1 mouse_genomes_project 2 69715549 69716448 + Ppig protein_coding processed_transcript MGP_129S1SvImJ_T0055152.1 MGP_129S1SvImJ_G0025803.1 mouse_genomes_project 2 69719062 69725996 + Ppig protein_coding processed_transcript MGP_129S1SvImJ_T0055153.1 MGP_129S1SvImJ_G0025803.1 mouse_genomes_project 2 69726051 69733863 + Ppig protein_coding processed_transcript MGP_129S1SvImJ_T0055996.1 MGP_129S1SvImJ_G0026134.1 mouse_genomes_project 2 92172819 92177485 + MGP_129S1SvImJ_P0055996 C1qtnf4 protein_coding protein_coding MGP_129S1SvImJ_T0007349.1 MGP_129S1SvImJ_G0006028.1 mouse_genomes_project 2 141691552 141698338 - Gm14062 lincRNA lincRNA MGP_129S1SvImJ_T0054493.1 MGP_129S1SvImJ_G0025677.1 mouse_genomes_project 2 35537719 35538652 - MGP_129S1SvImJ_P0054493 Olfr351 protein_coding protein_coding MGP_129S1SvImJ_T0059432.1 MGP_129S1SvImJ_G0026918.1 mouse_genomes_project 2 173459086 173460590 + MGP_129S1SvImJ_P0059432 Cebpb protein_coding protein_coding MGP_129S1SvImJ_T0055738.1 MGP_129S1SvImJ_G0025946.1 mouse_genomes_project 2 86707705 86708629 + MGP_129S1SvImJ_P0055738 Olfr1026 protein_coding protein_coding MGP_129S1SvImJ_T0007347.1 MGP_129S1SvImJ_G0006026.1 mouse_genomes_project 2 141093755 141134218 + Gm14055 lincRNA lincRNA MGP_129S1SvImJ_T0099703.1 MGP_129S1SvImJ_G0037770.1 mouse_genomes_project 2 139784489 139784590 - Gm26227 snRNA snRNA MGP_129S1SvImJ_T0010358.1 MGP_129S1SvImJ_G0008474.1 mouse_genomes_project 2 7825012 7825106 + Mir466f-2 miRNA miRNA MGP_129S1SvImJ_T0102393.1 MGP_129S1SvImJ_G0040227.1 mouse_genomes_project 2 70255381 70257536 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0013817.1 MGP_129S1SvImJ_G0011906.1 mouse_genomes_project 2 151118164 151119128 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017863.1 MGP_129S1SvImJ_G0015454.1 mouse_genomes_project 2 115873667 115883263 + Gm13965 processed_transcript processed_transcript MGP_129S1SvImJ_T0013851.1 MGP_129S1SvImJ_G0011940.1 mouse_genomes_project 2 161230052 161230669 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055788.1 MGP_129S1SvImJ_G0025994.1 mouse_genomes_project 2 88033818 88034757 - MGP_129S1SvImJ_P0055788 Olfr1106 protein_coding protein_coding MGP_129S1SvImJ_T0013820.1 MGP_129S1SvImJ_G0011909.1 mouse_genomes_project 2 151566675 151567651 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0057466.1 MGP_129S1SvImJ_G0026451.1 mouse_genomes_project 2 130447075 130480209 - MGP_129S1SvImJ_P0057466 1810024B03Rik protein_coding protein_coding MGP_129S1SvImJ_T0057467.1 MGP_129S1SvImJ_G0026451.1 mouse_genomes_project 2 130475106 130480183 - 1810024B03Rik protein_coding processed_transcript MGP_129S1SvImJ_T0058668.1 MGP_129S1SvImJ_G0026753.1 mouse_genomes_project 2 160876789 160909909 - MGP_129S1SvImJ_P0058668 Fer1l4 protein_coding protein_coding MGP_129S1SvImJ_T0058669.1 MGP_129S1SvImJ_G0026753.1 mouse_genomes_project 2 160876790 160882537 - Fer1l4 protein_coding retained_intron MGP_129S1SvImJ_T0058670.1 MGP_129S1SvImJ_G0026753.1 mouse_genomes_project 2 160876791 160893698 - Fer1l4 protein_coding retained_intron MGP_129S1SvImJ_T0058671.1 MGP_129S1SvImJ_G0026753.1 mouse_genomes_project 2 160886406 160888465 - MGP_129S1SvImJ_P0058671 Fer1l4 protein_coding protein_coding MGP_129S1SvImJ_T0058672.1 MGP_129S1SvImJ_G0026753.1 mouse_genomes_project 2 160886555 160888467 - Fer1l4 protein_coding retained_intron MGP_129S1SvImJ_T0058673.1 MGP_129S1SvImJ_G0026753.1 mouse_genomes_project 2 160892072 160894433 - MGP_129S1SvImJ_P0058673 Fer1l4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057271.1 MGP_129S1SvImJ_G0026403.1 mouse_genomes_project 2 125004534 125032442 + MGP_129S1SvImJ_P0057271 Eif3j2 protein_coding protein_coding MGP_129S1SvImJ_T0059119.1 MGP_129S1SvImJ_G0026848.1 mouse_genomes_project 2 169783326 169785764 - MGP_129S1SvImJ_P0059119 Slpi protein_coding protein_coding MGP_129S1SvImJ_T0059120.1 MGP_129S1SvImJ_G0026848.1 mouse_genomes_project 2 169783418 169785324 - MGP_129S1SvImJ_P0059120 Slpi protein_coding protein_coding MGP_129S1SvImJ_T0059121.1 MGP_129S1SvImJ_G0026848.1 mouse_genomes_project 2 169784851 169822264 - MGP_129S1SvImJ_P0059121 Slpi protein_coding protein_coding MGP_129S1SvImJ_T0055594.1 MGP_129S1SvImJ_G0025893.1 mouse_genomes_project 2 84474872 84553495 + MGP_129S1SvImJ_P0055594 Fam171b protein_coding protein_coding MGP_129S1SvImJ_T0055595.1 MGP_129S1SvImJ_G0025893.1 mouse_genomes_project 2 84537489 84539875 + Fam171b protein_coding processed_transcript MGP_129S1SvImJ_T0056868.1 MGP_129S1SvImJ_G0026334.1 mouse_genomes_project 2 121907195 121921280 - MGP_129S1SvImJ_P0056868 Dnajc17 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0056869.1 MGP_129S1SvImJ_G0026334.1 mouse_genomes_project 2 121907203 121944570 - MGP_129S1SvImJ_P0056869 Dnajc17 protein_coding protein_coding MGP_129S1SvImJ_T0056871.1 MGP_129S1SvImJ_G0026334.1 mouse_genomes_project 2 121914147 121918380 - Dnajc17 protein_coding processed_transcript MGP_129S1SvImJ_T0056872.1 MGP_129S1SvImJ_G0026334.1 mouse_genomes_project 2 121918417 121944557 - Dnajc17 protein_coding retained_intron MGP_129S1SvImJ_T0013776.1 MGP_129S1SvImJ_G0011865.1 mouse_genomes_project 2 134481166 134482221 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007218.1 MGP_129S1SvImJ_G0005921.1 mouse_genomes_project 2 60581525 60592257 - Gm13582 lincRNA lincRNA MGP_129S1SvImJ_T0013823.1 MGP_129S1SvImJ_G0011912.1 mouse_genomes_project 2 151968857 151969295 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055795.1 MGP_129S1SvImJ_G0026001.1 mouse_genomes_project 2 88264361 88265534 + MGP_129S1SvImJ_P0055795 Olfr1115 protein_coding protein_coding MGP_129S1SvImJ_T0053524.1 MGP_129S1SvImJ_G0025517.1 mouse_genomes_project 2 25889485 26049391 + MGP_129S1SvImJ_P0053524 Col5a1 protein_coding protein_coding MGP_129S1SvImJ_T0053525.1 MGP_129S1SvImJ_G0025517.1 mouse_genomes_project 2 26027330 26046890 + MGP_129S1SvImJ_P0053525 Col5a1 protein_coding protein_coding MGP_129S1SvImJ_T0053024.1 MGP_129S1SvImJ_G0025423.1 mouse_genomes_project 2 23063004 23074783 - MGP_129S1SvImJ_P0053024 Nelfb protein_coding protein_coding MGP_129S1SvImJ_T0053025.1 MGP_129S1SvImJ_G0025423.1 mouse_genomes_project 2 23063005 23074783 - MGP_129S1SvImJ_P0053025 Nelfb protein_coding protein_coding MGP_129S1SvImJ_T0053026.1 MGP_129S1SvImJ_G0025423.1 mouse_genomes_project 2 23063008 23074675 - Nelfb protein_coding retained_intron MGP_129S1SvImJ_T0053027.1 MGP_129S1SvImJ_G0025423.1 mouse_genomes_project 2 23063330 23067086 - Nelfb protein_coding retained_intron MGP_129S1SvImJ_T0053028.1 MGP_129S1SvImJ_G0025423.1 mouse_genomes_project 2 23063977 23067214 - MGP_129S1SvImJ_P0053028 Nelfb protein_coding protein_coding MGP_129S1SvImJ_T0053029.1 MGP_129S1SvImJ_G0025423.1 mouse_genomes_project 2 23064446 23066894 - Nelfb protein_coding retained_intron MGP_129S1SvImJ_T0053030.1 MGP_129S1SvImJ_G0025423.1 mouse_genomes_project 2 23067183 23074020 - MGP_129S1SvImJ_P0053030 Nelfb protein_coding protein_coding MGP_129S1SvImJ_T0053031.1 MGP_129S1SvImJ_G0025423.1 mouse_genomes_project 2 23067243 23073368 - Nelfb protein_coding processed_transcript MGP_129S1SvImJ_T0053032.1 MGP_129S1SvImJ_G0025423.1 mouse_genomes_project 2 23068459 23073994 - Nelfb protein_coding retained_intron MGP_129S1SvImJ_T0054318.1 MGP_129S1SvImJ_G0025639.1 mouse_genomes_project 2 33280935 33362775 - MGP_129S1SvImJ_P0054318 Gapvd1 protein_coding protein_coding MGP_129S1SvImJ_T0054319.1 MGP_129S1SvImJ_G0025639.1 mouse_genomes_project 2 33281819 33362072 - MGP_129S1SvImJ_P0054319 Gapvd1 protein_coding protein_coding MGP_129S1SvImJ_T0054320.1 MGP_129S1SvImJ_G0025639.1 mouse_genomes_project 2 33283326 33362171 - MGP_129S1SvImJ_P0054320 Gapvd1 protein_coding protein_coding MGP_129S1SvImJ_T0054321.1 MGP_129S1SvImJ_G0025639.1 mouse_genomes_project 2 33283326 33362171 - MGP_129S1SvImJ_P0054321 Gapvd1 protein_coding protein_coding MGP_129S1SvImJ_T0054322.1 MGP_129S1SvImJ_G0025639.1 mouse_genomes_project 2 33283824 33310975 - MGP_129S1SvImJ_P0054322 Gapvd1 protein_coding protein_coding MGP_129S1SvImJ_T0054323.1 MGP_129S1SvImJ_G0025639.1 mouse_genomes_project 2 33284235 33289054 - MGP_129S1SvImJ_P0054323 Gapvd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054324.1 MGP_129S1SvImJ_G0025639.1 mouse_genomes_project 2 33300056 33311235 - Gapvd1 protein_coding processed_transcript MGP_129S1SvImJ_T0054325.1 MGP_129S1SvImJ_G0025639.1 mouse_genomes_project 2 33303637 33307677 - Gapvd1 protein_coding retained_intron MGP_129S1SvImJ_T0054326.1 MGP_129S1SvImJ_G0025639.1 mouse_genomes_project 2 33306447 33335521 - MGP_129S1SvImJ_P0054326 Gapvd1 protein_coding protein_coding MGP_129S1SvImJ_T0054327.1 MGP_129S1SvImJ_G0025639.1 mouse_genomes_project 2 33306468 33335424 - MGP_129S1SvImJ_P0054327 Gapvd1 protein_coding protein_coding MGP_129S1SvImJ_T0054328.1 MGP_129S1SvImJ_G0025639.1 mouse_genomes_project 2 33310891 33318836 - MGP_129S1SvImJ_P0054328 Gapvd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054329.1 MGP_129S1SvImJ_G0025639.1 mouse_genomes_project 2 33310935 33318951 - Gapvd1 protein_coding processed_transcript MGP_129S1SvImJ_T0054330.1 MGP_129S1SvImJ_G0025639.1 mouse_genomes_project 2 33315816 33319347 - Gapvd1 protein_coding retained_intron MGP_129S1SvImJ_T0054331.1 MGP_129S1SvImJ_G0025639.1 mouse_genomes_project 2 33332891 33362035 - Gapvd1 protein_coding retained_intron MGP_129S1SvImJ_T0054332.1 MGP_129S1SvImJ_G0025639.1 mouse_genomes_project 2 33335494 33362021 - MGP_129S1SvImJ_P0054332 Gapvd1 protein_coding protein_coding MGP_129S1SvImJ_T0056665.1 MGP_129S1SvImJ_G0026280.1 mouse_genomes_project 2 114494129 114495065 - MGP_129S1SvImJ_P0056665 Olfr1313 protein_coding protein_coding MGP_129S1SvImJ_T0013818.1 MGP_129S1SvImJ_G0011907.1 mouse_genomes_project 2 151401124 151401929 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0055828.1 MGP_129S1SvImJ_G0026025.1 mouse_genomes_project 2 88820181 88821117 - MGP_129S1SvImJ_P0055828 Olfr1141 protein_coding protein_coding MGP_129S1SvImJ_T0013570.1 MGP_129S1SvImJ_G0011659.1 mouse_genomes_project 2 58928541 58929337 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0053504.1 MGP_129S1SvImJ_G0025514.1 mouse_genomes_project 2 25433629 25463423 - MGP_129S1SvImJ_P0053504 Brd3 protein_coding protein_coding MGP_129S1SvImJ_T0053505.1 MGP_129S1SvImJ_G0025514.1 mouse_genomes_project 2 25433629 25463711 - MGP_129S1SvImJ_P0053505 Brd3 protein_coding protein_coding MGP_129S1SvImJ_T0053506.1 MGP_129S1SvImJ_G0025514.1 mouse_genomes_project 2 25433650 25463698 - MGP_129S1SvImJ_P0053506 Brd3 protein_coding protein_coding MGP_129S1SvImJ_T0053507.1 MGP_129S1SvImJ_G0025514.1 mouse_genomes_project 2 25435891 25452141 - MGP_129S1SvImJ_P0053507 Brd3 protein_coding protein_coding MGP_129S1SvImJ_T0053508.1 MGP_129S1SvImJ_G0025514.1 mouse_genomes_project 2 25437297 25501233 - MGP_129S1SvImJ_P0053508 Brd3 protein_coding protein_coding MGP_129S1SvImJ_T0053509.1 MGP_129S1SvImJ_G0025514.1 mouse_genomes_project 2 25437297 25463679 - MGP_129S1SvImJ_P0053509 Brd3 protein_coding protein_coding MGP_129S1SvImJ_T0053510.1 MGP_129S1SvImJ_G0025514.1 mouse_genomes_project 2 25441020 25463678 - Brd3 protein_coding processed_transcript MGP_129S1SvImJ_T0053511.1 MGP_129S1SvImJ_G0025514.1 mouse_genomes_project 2 25451555 25463632 - MGP_129S1SvImJ_P0053511 Brd3 protein_coding protein_coding MGP_129S1SvImJ_T0053512.1 MGP_129S1SvImJ_G0025514.1 mouse_genomes_project 2 25451916 25452607 - Brd3 protein_coding processed_transcript MGP_129S1SvImJ_T0053513.1 MGP_129S1SvImJ_G0025514.1 mouse_genomes_project 2 25452023 25463206 - Brd3 protein_coding processed_transcript MGP_129S1SvImJ_T0054148.1 MGP_129S1SvImJ_G0025611.1 mouse_genomes_project 2 31048627 31050128 - MGP_129S1SvImJ_P0054148 9430097D07Rik protein_coding protein_coding MGP_129S1SvImJ_T0058027.1 MGP_129S1SvImJ_G0026584.1 mouse_genomes_project 2 148454497 148458901 + Csrp2bp protein_coding processed_transcript MGP_129S1SvImJ_T0058028.1 MGP_129S1SvImJ_G0026584.1 mouse_genomes_project 2 148454503 148499055 + MGP_129S1SvImJ_P0058028 Csrp2bp protein_coding protein_coding MGP_129S1SvImJ_T0058030.1 MGP_129S1SvImJ_G0026584.1 mouse_genomes_project 2 148459310 148481889 + MGP_129S1SvImJ_P0058030 Csrp2bp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0058031.1 MGP_129S1SvImJ_G0026584.1 mouse_genomes_project 2 148460894 148476147 + Csrp2bp protein_coding processed_transcript MGP_129S1SvImJ_T0058032.1 MGP_129S1SvImJ_G0026584.1 mouse_genomes_project 2 148461359 148492825 + Csrp2bp protein_coding processed_transcript MGP_129S1SvImJ_T0058033.1 MGP_129S1SvImJ_G0026584.1 mouse_genomes_project 2 148475864 148481954 + Csrp2bp protein_coding retained_intron MGP_129S1SvImJ_T0058034.1 MGP_129S1SvImJ_G0026584.1 mouse_genomes_project 2 148475878 148481935 + Csrp2bp protein_coding processed_transcript MGP_129S1SvImJ_T0058035.1 MGP_129S1SvImJ_G0026584.1 mouse_genomes_project 2 148494389 148499934 + Csrp2bp protein_coding retained_intron MGP_129S1SvImJ_T0058036.1 MGP_129S1SvImJ_G0026584.1 mouse_genomes_project 2 148494589 148496509 + MGP_129S1SvImJ_P0058036 Csrp2bp protein_coding protein_coding MGP_129S1SvImJ_T0058037.1 MGP_129S1SvImJ_G0026584.1 mouse_genomes_project 2 148496233 148499935 + MGP_129S1SvImJ_P0058037 Csrp2bp protein_coding protein_coding MGP_129S1SvImJ_T0004165.1 MGP_129S1SvImJ_G0003685.1 mouse_genomes_project 2 167644924 167648053 + Ptprtos antisense antisense MGP_129S1SvImJ_T0003917.1 MGP_129S1SvImJ_G0003503.1 mouse_genomes_project 2 7243868 7252321 + Gm13262 antisense antisense MGP_129S1SvImJ_T0102405.1 MGP_129S1SvImJ_G0040239.1 mouse_genomes_project 2 86949893 86950848 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0059352.1 MGP_129S1SvImJ_G0026902.1 mouse_genomes_project 2 172473091 172474951 + MGP_129S1SvImJ_P0059352 protein_coding protein_coding MGP_129S1SvImJ_T0059353.1 MGP_129S1SvImJ_G0026902.1 mouse_genomes_project 2 172474329 172480738 + MGP_129S1SvImJ_P0059353 protein_coding protein_coding MGP_129S1SvImJ_T0057529.1 MGP_129S1SvImJ_G0026468.1 mouse_genomes_project 2 131082014 131083116 - MGP_129S1SvImJ_P0057529 1500011K16Rik protein_coding protein_coding MGP_129S1SvImJ_T0058413.1 MGP_129S1SvImJ_G0026696.1 mouse_genomes_project 2 158320055 158365487 + MGP_129S1SvImJ_P0058413 Dnmt3b protein_coding protein_coding MGP_129S1SvImJ_T0058414.1 MGP_129S1SvImJ_G0026696.1 mouse_genomes_project 2 158320055 158365487 + MGP_129S1SvImJ_P0058414 Dnmt3b protein_coding protein_coding MGP_129S1SvImJ_T0058415.1 MGP_129S1SvImJ_G0026696.1 mouse_genomes_project 2 158320058 158365487 + MGP_129S1SvImJ_P0058415 Dnmt3b protein_coding protein_coding MGP_129S1SvImJ_T0058416.1 MGP_129S1SvImJ_G0026696.1 mouse_genomes_project 2 158320058 158365487 + MGP_129S1SvImJ_P0058416 Dnmt3b protein_coding protein_coding MGP_129S1SvImJ_T0058417.1 MGP_129S1SvImJ_G0026696.1 mouse_genomes_project 2 158320059 158365483 + MGP_129S1SvImJ_P0058417 Dnmt3b protein_coding protein_coding MGP_129S1SvImJ_T0058418.1 MGP_129S1SvImJ_G0026696.1 mouse_genomes_project 2 158320222 158365073 + MGP_129S1SvImJ_P0058418 Dnmt3b protein_coding protein_coding MGP_129S1SvImJ_T0058419.1 MGP_129S1SvImJ_G0026696.1 mouse_genomes_project 2 158320282 158365492 + MGP_129S1SvImJ_P0058419 Dnmt3b protein_coding protein_coding MGP_129S1SvImJ_T0058420.1 MGP_129S1SvImJ_G0026696.1 mouse_genomes_project 2 158337791 158339949 + Dnmt3b protein_coding retained_intron MGP_129S1SvImJ_T0058421.1 MGP_129S1SvImJ_G0026696.1 mouse_genomes_project 2 158341359 158342406 + Dnmt3b protein_coding retained_intron MGP_129S1SvImJ_T0056664.1 MGP_129S1SvImJ_G0026279.1 mouse_genomes_project 2 114475684 114476638 - MGP_129S1SvImJ_P0056664 Olfr1312 protein_coding protein_coding MGP_129S1SvImJ_T0100961.1 MGP_129S1SvImJ_G0039028.1 mouse_genomes_project 2 110346932 110347063 - Gm23749 snoRNA snoRNA MGP_129S1SvImJ_T0003911.1 MGP_129S1SvImJ_G0003498.1 mouse_genomes_project 2 3028870 3034874 + Gm13267 antisense antisense MGP_129S1SvImJ_T0003912.1 MGP_129S1SvImJ_G0003498.1 mouse_genomes_project 2 3028960 3033647 + Gm13267 antisense antisense MGP_129S1SvImJ_T0059170.1 MGP_129S1SvImJ_G0026867.1 mouse_genomes_project 2 170187493 170191440 + MGP_129S1SvImJ_P0059170 Spint4 protein_coding protein_coding MGP_129S1SvImJ_T0055743.1 MGP_129S1SvImJ_G0025951.1 mouse_genomes_project 2 86827581 86828492 + MGP_129S1SvImJ_P0055743 Olfr1033 protein_coding protein_coding MGP_129S1SvImJ_T0007340.1 MGP_129S1SvImJ_G0006019.1 mouse_genomes_project 2 136598494 136599858 + Gm14102 lincRNA lincRNA MGP_129S1SvImJ_T0059645.1 MGP_129S1SvImJ_G0026977.1 mouse_genomes_project 2 184842195 184845462 - MGP_129S1SvImJ_P0059645 Ppp1r3d protein_coding protein_coding MGP_129S1SvImJ_T0057789.1 MGP_129S1SvImJ_G0026529.1 mouse_genomes_project 2 134778464 134800837 + Pank2 protein_coding processed_transcript MGP_129S1SvImJ_T0057790.1 MGP_129S1SvImJ_G0026529.1 mouse_genomes_project 2 134778469 134821211 + MGP_129S1SvImJ_P0057790 Pank2 protein_coding protein_coding MGP_129S1SvImJ_T0057791.1 MGP_129S1SvImJ_G0026529.1 mouse_genomes_project 2 134778494 134818513 + MGP_129S1SvImJ_P0057791 Pank2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057792.1 MGP_129S1SvImJ_G0026529.1 mouse_genomes_project 2 134778537 134821209 + MGP_129S1SvImJ_P0057792 Pank2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057793.1 MGP_129S1SvImJ_G0026529.1 mouse_genomes_project 2 134778765 134818356 + MGP_129S1SvImJ_P0057793 Pank2 protein_coding protein_coding MGP_129S1SvImJ_T0057794.1 MGP_129S1SvImJ_G0026529.1 mouse_genomes_project 2 134778808 134818716 + Pank2 protein_coding processed_transcript MGP_129S1SvImJ_T0057795.1 MGP_129S1SvImJ_G0026529.1 mouse_genomes_project 2 134791478 134813348 + MGP_129S1SvImJ_P0057795 Pank2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0057796.1 MGP_129S1SvImJ_G0026529.1 mouse_genomes_project 2 134791586 134818333 + MGP_129S1SvImJ_P0057796 Pank2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0013459.1 MGP_129S1SvImJ_G0011548.1 mouse_genomes_project 2 16476702 16477483 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0054919.1 MGP_129S1SvImJ_G0025760.1 mouse_genomes_project 2 59833435 59869291 - MGP_129S1SvImJ_P0054919 Cd302 protein_coding protein_coding MGP_129S1SvImJ_T0054920.1 MGP_129S1SvImJ_G0025760.1 mouse_genomes_project 2 59833435 59869221 - MGP_129S1SvImJ_P0054920 Cd302 protein_coding protein_coding MGP_129S1SvImJ_T0058349.1 MGP_129S1SvImJ_G0026681.1 mouse_genomes_project 2 157534866 157536177 - MGP_129S1SvImJ_P0058349 Foxs1 protein_coding protein_coding MGP_129S1SvImJ_T0001116.1 MGP_129S1SvImJ_G0001045.1 mouse_genomes_project 2 130547093 130547703 - TEC TEC MGP_129S1SvImJ_T0001117.1 MGP_129S1SvImJ_G0001045.1 mouse_genomes_project 2 130547357 130547681 - TEC TEC MGP_129S1SvImJ_T0059104.1 MGP_129S1SvImJ_G0026838.1 mouse_genomes_project 2 169569939 169577743 - MGP_129S1SvImJ_P0059104 Wfdc5 protein_coding protein_coding MGP_129S1SvImJ_T0059105.1 MGP_129S1SvImJ_G0026838.1 mouse_genomes_project 2 169571105 169577599 - MGP_129S1SvImJ_P0059105 Wfdc5 protein_coding protein_coding MGP_129S1SvImJ_T0057530.1 MGP_129S1SvImJ_G0026469.1 mouse_genomes_project 2 131084831 131119532 - MGP_129S1SvImJ_P0057530 Bub1 protein_coding protein_coding MGP_129S1SvImJ_T0057531.1 MGP_129S1SvImJ_G0026469.1 mouse_genomes_project 2 131088211 131088974 - Bub1 protein_coding retained_intron MGP_129S1SvImJ_T0057532.1 MGP_129S1SvImJ_G0026469.1 mouse_genomes_project 2 131093546 131098918 - Bub1 protein_coding processed_transcript MGP_129S1SvImJ_T0057533.1 MGP_129S1SvImJ_G0026469.1 mouse_genomes_project 2 131095588 131099969 - Bub1 protein_coding processed_transcript MGP_129S1SvImJ_T0057534.1 MGP_129S1SvImJ_G0026469.1 mouse_genomes_project 2 131109927 131119471 - Bub1 protein_coding retained_intron MGP_129S1SvImJ_T0056860.1 MGP_129S1SvImJ_G0026332.1 mouse_genomes_project 2 121869954 121890824 - MGP_129S1SvImJ_P0056860 Rmdn3 protein_coding protein_coding MGP_129S1SvImJ_T0056861.1 MGP_129S1SvImJ_G0026332.1 mouse_genomes_project 2 121872008 121873829 - Rmdn3 protein_coding retained_intron MGP_129S1SvImJ_T0056862.1 MGP_129S1SvImJ_G0026332.1 mouse_genomes_project 2 121875371 121881235 - Rmdn3 protein_coding retained_intron MGP_129S1SvImJ_T0056863.1 MGP_129S1SvImJ_G0026332.1 mouse_genomes_project 2 121879950 121881244 - Rmdn3 protein_coding retained_intron MGP_129S1SvImJ_T0056864.1 MGP_129S1SvImJ_G0026332.1 mouse_genomes_project 2 121887823 121890614 - MGP_129S1SvImJ_P0056864 Rmdn3 protein_coding protein_coding MGP_129S1SvImJ_T0056865.1 MGP_129S1SvImJ_G0026332.1 mouse_genomes_project 2 121887853 121890738 - MGP_129S1SvImJ_P0056865 Rmdn3 protein_coding protein_coding MGP_129S1SvImJ_T0056866.1 MGP_129S1SvImJ_G0026332.1 mouse_genomes_project 2 121887863 121890754 - MGP_129S1SvImJ_P0056866 Rmdn3 protein_coding protein_coding MGP_129S1SvImJ_T0102378.1 MGP_129S1SvImJ_G0040212.1 mouse_genomes_project 2 20295546 20296218 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0013880.1 MGP_129S1SvImJ_G0011969.1 mouse_genomes_project 2 172788940 172789496 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003930.1 MGP_129S1SvImJ_G0003514.1 mouse_genomes_project 2 18045254 18069314 - Gm17171 antisense antisense MGP_129S1SvImJ_T0056630.1 MGP_129S1SvImJ_G0026248.1 mouse_genomes_project 2 113080464 113099331 + MGP_129S1SvImJ_P0056630 Muc15 protein_coding protein_coding MGP_129S1SvImJ_T0056631.1 MGP_129S1SvImJ_G0026248.1 mouse_genomes_project 2 113080735 113099331 + MGP_129S1SvImJ_P0056631 Muc15 protein_coding protein_coding MGP_129S1SvImJ_T0056632.1 MGP_129S1SvImJ_G0026248.1 mouse_genomes_project 2 113080772 113097401 + MGP_129S1SvImJ_P0056632 Muc15 protein_coding protein_coding MGP_129S1SvImJ_T0054470.1 MGP_129S1SvImJ_G0025662.1 mouse_genomes_project 2 34822419 34877411 + MGP_129S1SvImJ_P0054470 Mrrf protein_coding protein_coding MGP_129S1SvImJ_T0054471.1 MGP_129S1SvImJ_G0025662.1 mouse_genomes_project 2 34822428 34824847 + Mrrf protein_coding retained_intron MGP_129S1SvImJ_T0054472.1 MGP_129S1SvImJ_G0025662.1 mouse_genomes_project 2 34822664 34833977 + MGP_129S1SvImJ_P0054472 Mrrf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0054473.1 MGP_129S1SvImJ_G0025662.1 mouse_genomes_project 2 34833160 34845720 + Mrrf protein_coding processed_transcript MGP_129S1SvImJ_T0013829.1 MGP_129S1SvImJ_G0011918.1 mouse_genomes_project 2 154813827 154814222 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007348.1 MGP_129S1SvImJ_G0006027.1 mouse_genomes_project 2 141468022 141643259 + Gm14064 lincRNA lincRNA MGP_129S1SvImJ_T0059166.1 MGP_129S1SvImJ_G0026864.1 mouse_genomes_project 2 170137366 170138689 + MGP_129S1SvImJ_P0059166 Wfdc10 protein_coding protein_coding MGP_129S1SvImJ_T0007365.1 MGP_129S1SvImJ_G0006041.1 mouse_genomes_project 2 155592892 155658983 + lincRNA lincRNA MGP_129S1SvImJ_T0058024.1 MGP_129S1SvImJ_G0026583.1 mouse_genomes_project 2 148385932 148415461 - MGP_129S1SvImJ_P0058024 Ovol2 protein_coding protein_coding MGP_129S1SvImJ_T0058025.1 MGP_129S1SvImJ_G0026583.1 mouse_genomes_project 2 148385932 148415912 - MGP_129S1SvImJ_P0058025 Ovol2 protein_coding protein_coding MGP_129S1SvImJ_T0058026.1 MGP_129S1SvImJ_G0026583.1 mouse_genomes_project 2 148400429 148415091 - Ovol2 protein_coding processed_transcript MGP_129S1SvImJ_T0007189.1 MGP_129S1SvImJ_G0005897.1 mouse_genomes_project 2 33853804 33855524 + Gm13605 lincRNA lincRNA MGP_129S1SvImJ_T0058001.1 MGP_129S1SvImJ_G0026577.1 mouse_genomes_project 2 147860026 147902894 - MGP_129S1SvImJ_P0058001 Bfsp1 protein_coding protein_coding MGP_129S1SvImJ_T0058002.1 MGP_129S1SvImJ_G0026577.1 mouse_genomes_project 2 147860026 147902664 - MGP_129S1SvImJ_P0058002 Bfsp1 protein_coding protein_coding MGP_129S1SvImJ_T0055732.1 MGP_129S1SvImJ_G0025941.1 mouse_genomes_project 2 86623328 86624261 - MGP_129S1SvImJ_P0055732 Olfr1019 protein_coding protein_coding MGP_129S1SvImJ_T0057395.1 MGP_129S1SvImJ_G0026437.1 mouse_genomes_project 2 129234627 129236074 + Fgf7 protein_coding processed_transcript MGP_129S1SvImJ_T0057396.1 MGP_129S1SvImJ_G0026437.1 mouse_genomes_project 2 129234627 129291134 + MGP_129S1SvImJ_P0057396 Fgf7 protein_coding protein_coding MGP_129S1SvImJ_T0057397.1 MGP_129S1SvImJ_G0026437.1 mouse_genomes_project 2 129234942 129290470 + MGP_129S1SvImJ_P0057397 Fgf7 protein_coding protein_coding MGP_129S1SvImJ_T0010491.1 MGP_129S1SvImJ_G0008607.1 mouse_genomes_project 2 168367688 168367754 + Mir7003 miRNA miRNA MGP_129S1SvImJ_T0100954.1 MGP_129S1SvImJ_G0039021.1 mouse_genomes_project 2 96361363 96361495 - Gm26396 snoRNA snoRNA MGP_129S1SvImJ_T0007177.1 MGP_129S1SvImJ_G0005888.1 mouse_genomes_project 2 28886126 28950278 + 9330198N18Rik lincRNA lincRNA MGP_129S1SvImJ_T0010407.1 MGP_129S1SvImJ_G0008523.1 mouse_genomes_project 2 28017457 28017554 - Mir219a-2 miRNA miRNA MGP_129S1SvImJ_T0056946.1 MGP_129S1SvImJ_G0026354.1 mouse_genomes_project 2 122745288 122822533 + MGP_129S1SvImJ_P0056946 Mga protein_coding protein_coding MGP_129S1SvImJ_T0056947.1 MGP_129S1SvImJ_G0026354.1 mouse_genomes_project 2 122745288 122822533 + MGP_129S1SvImJ_P0056947 Mga protein_coding protein_coding MGP_129S1SvImJ_T0056948.1 MGP_129S1SvImJ_G0026354.1 mouse_genomes_project 2 122745288 122822533 + MGP_129S1SvImJ_P0056948 Mga protein_coding protein_coding MGP_129S1SvImJ_T0056949.1 MGP_129S1SvImJ_G0026354.1 mouse_genomes_project 2 122745288 122818493 + MGP_129S1SvImJ_P0056949 Mga protein_coding protein_coding MGP_129S1SvImJ_T0056950.1 MGP_129S1SvImJ_G0026354.1 mouse_genomes_project 2 122745292 122767130 + Mga protein_coding retained_intron MGP_129S1SvImJ_T0056951.1 MGP_129S1SvImJ_G0026354.1 mouse_genomes_project 2 122745304 122815701 + MGP_129S1SvImJ_P0056951 Mga protein_coding unknown_likely_coding MGP_129S1SvImJ_T0056952.1 MGP_129S1SvImJ_G0026354.1 mouse_genomes_project 2 122745308 122775833 + Mga protein_coding processed_transcript MGP_129S1SvImJ_T0056953.1 MGP_129S1SvImJ_G0026354.1 mouse_genomes_project 2 122745365 122811569 + MGP_129S1SvImJ_P0056953 Mga protein_coding protein_coding MGP_129S1SvImJ_T0056954.1 MGP_129S1SvImJ_G0026354.1 mouse_genomes_project 2 122770820 122773227 + Mga protein_coding retained_intron MGP_129S1SvImJ_T0056955.1 MGP_129S1SvImJ_G0026354.1 mouse_genomes_project 2 122784311 122788227 + Mga protein_coding processed_transcript MGP_129S1SvImJ_T0056956.1 MGP_129S1SvImJ_G0026354.1 mouse_genomes_project 2 122784480 122796168 + Mga protein_coding processed_transcript MGP_129S1SvImJ_T0056957.1 MGP_129S1SvImJ_G0026354.1 mouse_genomes_project 2 122784575 122791252 + Mga protein_coding processed_transcript MGP_129S1SvImJ_T0056958.1 MGP_129S1SvImJ_G0026354.1 mouse_genomes_project 2 122790961 122796917 + Mga protein_coding processed_transcript MGP_129S1SvImJ_T0056959.1 MGP_129S1SvImJ_G0026354.1 mouse_genomes_project 2 122791465 122796710 + Mga protein_coding processed_transcript MGP_129S1SvImJ_T0056960.1 MGP_129S1SvImJ_G0026354.1 mouse_genomes_project 2 122809083 122816101 + Mga protein_coding processed_transcript MGP_129S1SvImJ_T0056961.1 MGP_129S1SvImJ_G0026354.1 mouse_genomes_project 2 122811179 122812999 + Mga protein_coding retained_intron MGP_129S1SvImJ_T0059501.1 MGP_129S1SvImJ_G0026933.1 mouse_genomes_project 2 176123807 176146344 - MGP_129S1SvImJ_P0059501 Zfp217 protein_coding protein_coding MGP_129S1SvImJ_T0059502.1 MGP_129S1SvImJ_G0026933.1 mouse_genomes_project 2 176123810 176159278 - MGP_129S1SvImJ_P0059502 Zfp217 protein_coding protein_coding MGP_129S1SvImJ_T0059503.1 MGP_129S1SvImJ_G0026933.1 mouse_genomes_project 2 176135496 176146344 - Zfp217 protein_coding processed_transcript MGP_129S1SvImJ_T0059504.1 MGP_129S1SvImJ_G0026933.1 mouse_genomes_project 2 176135782 176149070 - Zfp217 protein_coding processed_transcript MGP_129S1SvImJ_T0059505.1 MGP_129S1SvImJ_G0026933.1 mouse_genomes_project 2 176135882 176164685 - Zfp217 protein_coding processed_transcript MGP_129S1SvImJ_T0059754.1 MGP_129S1SvImJ_G0027003.1 mouse_genomes_project 2 187330014 187332534 - MGP_129S1SvImJ_P0059754 Bhlhe23 protein_coding protein_coding MGP_129S1SvImJ_T0056673.1 MGP_129S1SvImJ_G0026285.1 mouse_genomes_project 2 114691019 114702967 - MGP_129S1SvImJ_P0056673 Nutm1 protein_coding protein_coding MGP_129S1SvImJ_T0055816.1 MGP_129S1SvImJ_G0026014.1 mouse_genomes_project 2 88689357 88690287 + MGP_129S1SvImJ_P0055816 protein_coding protein_coding MGP_129S1SvImJ_T0011206.1 MGP_129S1SvImJ_G0009322.1 mouse_genomes_project X 70068844 70068923 - Mir7091 miRNA miRNA MGP_129S1SvImJ_T0016673.1 MGP_129S1SvImJ_G0014762.1 mouse_genomes_project X 112594142 112594996 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016254.1 MGP_129S1SvImJ_G0014343.1 mouse_genomes_project X 15342983 15343179 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016693.1 MGP_129S1SvImJ_G0014782.1 mouse_genomes_project X 117054333 117054810 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097615.1 MGP_129S1SvImJ_G0036143.1 mouse_genomes_project X 138958597 139180556 + MGP_129S1SvImJ_P0097615 Col4a5 protein_coding protein_coding MGP_129S1SvImJ_T0097616.1 MGP_129S1SvImJ_G0036143.1 mouse_genomes_project X 138958622 139180502 + MGP_129S1SvImJ_P0097616 Col4a5 protein_coding protein_coding MGP_129S1SvImJ_T0097617.1 MGP_129S1SvImJ_G0036143.1 mouse_genomes_project X 139116438 139180556 + MGP_129S1SvImJ_P0097617 Col4a5 protein_coding protein_coding MGP_129S1SvImJ_T0097618.1 MGP_129S1SvImJ_G0036143.1 mouse_genomes_project X 139148343 139165729 + Col4a5 protein_coding processed_transcript MGP_129S1SvImJ_T0009426.1 MGP_129S1SvImJ_G0007561.1 mouse_genomes_project X 114360544 114360913 + Gm28579 lincRNA lincRNA MGP_129S1SvImJ_T0016401.1 MGP_129S1SvImJ_G0014490.1 mouse_genomes_project X 63930569 63930935 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009455.1 MGP_129S1SvImJ_G0007581.1 mouse_genomes_project X 167664422 167690999 + Gm15245 lincRNA lincRNA MGP_129S1SvImJ_T0097248.1 MGP_129S1SvImJ_G0036023.1 mouse_genomes_project X 106048179 106050002 + MGP_129S1SvImJ_P0097248 Gm6377 protein_coding protein_coding MGP_129S1SvImJ_T0097249.1 MGP_129S1SvImJ_G0036023.1 mouse_genomes_project X 106048181 106051863 + MGP_129S1SvImJ_P0097249 Gm6377 protein_coding protein_coding MGP_129S1SvImJ_T0016383.1 MGP_129S1SvImJ_G0014472.1 mouse_genomes_project X 58855448 58855750 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011188.1 MGP_129S1SvImJ_G0009304.1 mouse_genomes_project X 62379184 62379262 - Mir881 miRNA miRNA MGP_129S1SvImJ_T0016222.1 MGP_129S1SvImJ_G0014311.1 mouse_genomes_project X 7495629 7495737 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016393.1 MGP_129S1SvImJ_G0014482.1 mouse_genomes_project X 62352723 62353134 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016659.1 MGP_129S1SvImJ_G0014748.1 mouse_genomes_project X 110790761 110792330 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097301.1 MGP_129S1SvImJ_G0036042.1 mouse_genomes_project X 113471456 113471804 + MGP_129S1SvImJ_P0097301 H2afb2 protein_coding protein_coding MGP_129S1SvImJ_T0096327.1 MGP_129S1SvImJ_G0035793.1 mouse_genomes_project X 68120443 68346317 - MGP_129S1SvImJ_P0096327 Gabra3 protein_coding protein_coding MGP_129S1SvImJ_T0096328.1 MGP_129S1SvImJ_G0035793.1 mouse_genomes_project X 68122337 68346899 - MGP_129S1SvImJ_P0096328 Gabra3 protein_coding protein_coding MGP_129S1SvImJ_T0096329.1 MGP_129S1SvImJ_G0035793.1 mouse_genomes_project X 68191939 68346346 - Gabra3 protein_coding processed_transcript MGP_129S1SvImJ_T0097620.1 MGP_129S1SvImJ_G0036145.1 mouse_genomes_project X 139361350 139362385 - MGP_129S1SvImJ_P0097620 protein_coding protein_coding MGP_129S1SvImJ_T0016576.1 MGP_129S1SvImJ_G0014665.1 mouse_genomes_project X 98716958 98718952 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095929.1 MGP_129S1SvImJ_G0035665.1 mouse_genomes_project X 33360574 33418534 - MGP_129S1SvImJ_P0095929 Lamp2 protein_coding protein_coding MGP_129S1SvImJ_T0095930.1 MGP_129S1SvImJ_G0035665.1 mouse_genomes_project X 33364281 33418534 - MGP_129S1SvImJ_P0095930 Lamp2 protein_coding protein_coding MGP_129S1SvImJ_T0095931.1 MGP_129S1SvImJ_G0035665.1 mouse_genomes_project X 33379005 33418534 - MGP_129S1SvImJ_P0095931 Lamp2 protein_coding protein_coding MGP_129S1SvImJ_T0095932.1 MGP_129S1SvImJ_G0035665.1 mouse_genomes_project X 33389378 33402799 - Lamp2 protein_coding retained_intron MGP_129S1SvImJ_T0095933.1 MGP_129S1SvImJ_G0035665.1 mouse_genomes_project X 33414953 33418494 - Lamp2 protein_coding processed_transcript MGP_129S1SvImJ_T0096740.1 MGP_129S1SvImJ_G0035876.1 mouse_genomes_project X 74035637 74041158 + MGP_129S1SvImJ_P0096740 protein_coding protein_coding MGP_129S1SvImJ_T0016900.1 MGP_129S1SvImJ_G0014989.1 mouse_genomes_project X 160797912 160855404 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096110.1 MGP_129S1SvImJ_G0035714.1 mouse_genomes_project X 47168983 47173061 - MGP_129S1SvImJ_P0096110 1700080O16Rik protein_coding protein_coding MGP_129S1SvImJ_T0096111.1 MGP_129S1SvImJ_G0035714.1 mouse_genomes_project X 47169180 47171336 - MGP_129S1SvImJ_P0096111 1700080O16Rik protein_coding protein_coding MGP_129S1SvImJ_T0016546.1 MGP_129S1SvImJ_G0014635.1 mouse_genomes_project X 92574067 92574505 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097877.1 MGP_129S1SvImJ_G0036205.1 mouse_genomes_project X 152902462 152903167 - MGP_129S1SvImJ_P0097877 protein_coding protein_coding MGP_129S1SvImJ_T0102858.1 MGP_129S1SvImJ_G0040690.1 mouse_genomes_project X 73554539 73558617 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0011147.1 MGP_129S1SvImJ_G0009263.1 mouse_genomes_project X 14017303 14017382 - Mir222 miRNA miRNA MGP_129S1SvImJ_T0018638.1 MGP_129S1SvImJ_G0015771.1 mouse_genomes_project X 2738746 2752054 + Gm6787 processed_transcript processed_transcript MGP_129S1SvImJ_T0097592.1 MGP_129S1SvImJ_G0036135.1 mouse_genomes_project X 138096641 138099779 - Tsc22d3 protein_coding processed_transcript MGP_129S1SvImJ_T0097593.1 MGP_129S1SvImJ_G0036135.1 mouse_genomes_project X 138096641 138100299 - MGP_129S1SvImJ_P0097593 Tsc22d3 protein_coding protein_coding MGP_129S1SvImJ_T0097594.1 MGP_129S1SvImJ_G0036135.1 mouse_genomes_project X 138096650 138100212 - Tsc22d3 protein_coding retained_intron MGP_129S1SvImJ_T0097595.1 MGP_129S1SvImJ_G0036135.1 mouse_genomes_project X 138097372 138158932 - MGP_129S1SvImJ_P0097595 Tsc22d3 protein_coding protein_coding MGP_129S1SvImJ_T0097596.1 MGP_129S1SvImJ_G0036135.1 mouse_genomes_project X 138097461 138105468 - MGP_129S1SvImJ_P0097596 Tsc22d3 protein_coding protein_coding MGP_129S1SvImJ_T0097597.1 MGP_129S1SvImJ_G0036135.1 mouse_genomes_project X 138100213 138105659 - Tsc22d3 protein_coding processed_transcript MGP_129S1SvImJ_T0016541.1 MGP_129S1SvImJ_G0014630.1 mouse_genomes_project X 91336474 91337719 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016644.1 MGP_129S1SvImJ_G0014733.1 mouse_genomes_project X 108299908 108303151 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100253.1 MGP_129S1SvImJ_G0038320.1 mouse_genomes_project X 68301584 68301691 + Gm23461 snRNA snRNA MGP_129S1SvImJ_T0100238.1 MGP_129S1SvImJ_G0038305.1 mouse_genomes_project X 34298412 34298517 - Gm26437 snRNA snRNA MGP_129S1SvImJ_T0096332.1 MGP_129S1SvImJ_G0035795.1 mouse_genomes_project X 68611303 68614456 - MGP_129S1SvImJ_P0096332 Cetn2 protein_coding protein_coding MGP_129S1SvImJ_T0096333.1 MGP_129S1SvImJ_G0035795.1 mouse_genomes_project X 68611803 68615916 - MGP_129S1SvImJ_P0096333 Cetn2 protein_coding protein_coding MGP_129S1SvImJ_T0096334.1 MGP_129S1SvImJ_G0035795.1 mouse_genomes_project X 68612507 68615884 - MGP_129S1SvImJ_P0096334 Cetn2 protein_coding protein_coding MGP_129S1SvImJ_T0016577.1 MGP_129S1SvImJ_G0014666.1 mouse_genomes_project X 98761156 98761630 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011178.1 MGP_129S1SvImJ_G0009294.1 mouse_genomes_project X 62351038 62351100 - Mir743 miRNA miRNA MGP_129S1SvImJ_T0101798.1 MGP_129S1SvImJ_G0039765.1 mouse_genomes_project X 18249640 18250198 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0095828.1 MGP_129S1SvImJ_G0035613.1 mouse_genomes_project X 18752583 18787615 + MGP_129S1SvImJ_P0095828 Gm4907 protein_coding protein_coding MGP_129S1SvImJ_T0095829.1 MGP_129S1SvImJ_G0035613.1 mouse_genomes_project X 18772791 18787505 + MGP_129S1SvImJ_P0095829 Gm4907 protein_coding protein_coding MGP_129S1SvImJ_T0016652.1 MGP_129S1SvImJ_G0014741.1 mouse_genomes_project X 109528430 109528593 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096142.1 MGP_129S1SvImJ_G0035732.1 mouse_genomes_project X 51629998 51649154 + MGP_129S1SvImJ_P0096142 Zfp449 protein_coding protein_coding MGP_129S1SvImJ_T0016559.1 MGP_129S1SvImJ_G0014648.1 mouse_genomes_project X 95370739 95371134 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016643.1 MGP_129S1SvImJ_G0014732.1 mouse_genomes_project X 107455531 107458160 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016886.1 MGP_129S1SvImJ_G0014975.1 mouse_genomes_project X 157490052 157490328 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096882.1 MGP_129S1SvImJ_G0035921.1 mouse_genomes_project X 92079696 92080429 - MGP_129S1SvImJ_P0096882 Gm5941 protein_coding protein_coding MGP_129S1SvImJ_T0016397.1 MGP_129S1SvImJ_G0014486.1 mouse_genomes_project X 62773581 62774199 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016272.1 MGP_129S1SvImJ_G0014361.1 mouse_genomes_project X 31289017 31289311 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016758.1 MGP_129S1SvImJ_G0014847.1 mouse_genomes_project X 134528339 134530749 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097752.1 MGP_129S1SvImJ_G0036173.1 mouse_genomes_project X 148707080 148743973 - MGP_129S1SvImJ_P0097752 Gnl3l protein_coding protein_coding MGP_129S1SvImJ_T0097753.1 MGP_129S1SvImJ_G0036173.1 mouse_genomes_project X 148707080 148743973 - MGP_129S1SvImJ_P0097753 Gnl3l protein_coding protein_coding MGP_129S1SvImJ_T0097754.1 MGP_129S1SvImJ_G0036173.1 mouse_genomes_project X 148711790 148717891 - Gnl3l protein_coding retained_intron MGP_129S1SvImJ_T0097755.1 MGP_129S1SvImJ_G0036173.1 mouse_genomes_project X 148720817 148724487 - Gnl3l protein_coding retained_intron MGP_129S1SvImJ_T0097756.1 MGP_129S1SvImJ_G0036173.1 mouse_genomes_project X 148721187 148743973 - MGP_129S1SvImJ_P0097756 Gnl3l protein_coding protein_coding MGP_129S1SvImJ_T0097757.1 MGP_129S1SvImJ_G0036173.1 mouse_genomes_project X 148726917 148743973 - MGP_129S1SvImJ_P0097757 Gnl3l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097758.1 MGP_129S1SvImJ_G0036173.1 mouse_genomes_project X 148726961 148743973 - MGP_129S1SvImJ_P0097758 Gnl3l protein_coding protein_coding MGP_129S1SvImJ_T0016730.1 MGP_129S1SvImJ_G0014819.1 mouse_genomes_project X 130017186 130018238 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016650.1 MGP_129S1SvImJ_G0014739.1 mouse_genomes_project X 109222281 109224885 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096692.1 MGP_129S1SvImJ_G0035856.1 mouse_genomes_project X 71008677 71226704 - MGP_129S1SvImJ_P0096692 F8 protein_coding protein_coding MGP_129S1SvImJ_T0096693.1 MGP_129S1SvImJ_G0035856.1 mouse_genomes_project X 71008681 71224448 - MGP_129S1SvImJ_P0096693 F8 protein_coding protein_coding MGP_129S1SvImJ_T0096694.1 MGP_129S1SvImJ_G0035856.1 mouse_genomes_project X 71181427 71226880 - MGP_129S1SvImJ_P0096694 F8 protein_coding protein_coding MGP_129S1SvImJ_T0096695.1 MGP_129S1SvImJ_G0035856.1 mouse_genomes_project X 71198176 71226699 - MGP_129S1SvImJ_P0096695 F8 protein_coding protein_coding MGP_129S1SvImJ_T0102845.1 MGP_129S1SvImJ_G0040677.1 mouse_genomes_project X 32856583 32857593 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0096717.1 MGP_129S1SvImJ_G0035863.1 mouse_genomes_project X 71640516 71736915 - MGP_129S1SvImJ_P0096717 Pls3 protein_coding protein_coding MGP_129S1SvImJ_T0096718.1 MGP_129S1SvImJ_G0035863.1 mouse_genomes_project X 71640525 71732510 - MGP_129S1SvImJ_P0096718 Pls3 protein_coding protein_coding MGP_129S1SvImJ_T0096719.1 MGP_129S1SvImJ_G0035863.1 mouse_genomes_project X 71640525 71684163 - MGP_129S1SvImJ_P0096719 Pls3 protein_coding protein_coding MGP_129S1SvImJ_T0096720.1 MGP_129S1SvImJ_G0035863.1 mouse_genomes_project X 71640530 71700296 - MGP_129S1SvImJ_P0096720 Pls3 protein_coding protein_coding MGP_129S1SvImJ_T0096721.1 MGP_129S1SvImJ_G0035863.1 mouse_genomes_project X 71641633 71700418 - MGP_129S1SvImJ_P0096721 Pls3 protein_coding protein_coding MGP_129S1SvImJ_T0096722.1 MGP_129S1SvImJ_G0035863.1 mouse_genomes_project X 71731487 71736832 - Pls3 protein_coding processed_transcript MGP_129S1SvImJ_T0097128.1 MGP_129S1SvImJ_G0035985.1 mouse_genomes_project X 100065866 100127646 + MGP_129S1SvImJ_P0097128 Gm26992 protein_coding protein_coding MGP_129S1SvImJ_T0016807.1 MGP_129S1SvImJ_G0014896.1 mouse_genomes_project X 141873510 141873840 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096141.1 MGP_129S1SvImJ_G0035731.1 mouse_genomes_project X 49051419 49053766 - MGP_129S1SvImJ_P0096141 Zfp36l3 protein_coding protein_coding MGP_129S1SvImJ_T0096199.1 MGP_129S1SvImJ_G0035750.1 mouse_genomes_project X 52841227 52849925 - MGP_129S1SvImJ_P0096199 Gpr101 protein_coding protein_coding MGP_129S1SvImJ_T0002503.1 MGP_129S1SvImJ_G0002412.1 mouse_genomes_project X 125417057 125418122 + TEC TEC MGP_129S1SvImJ_T0016465.1 MGP_129S1SvImJ_G0014554.1 mouse_genomes_project X 76576626 76576851 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016527.1 MGP_129S1SvImJ_G0014616.1 mouse_genomes_project X 90407561 90408328 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100267.1 MGP_129S1SvImJ_G0038334.1 mouse_genomes_project X 102587759 102587942 + Gm26020 snRNA snRNA MGP_129S1SvImJ_T0016514.1 MGP_129S1SvImJ_G0014603.1 mouse_genomes_project X 87852100 87852488 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016315.1 MGP_129S1SvImJ_G0014404.1 mouse_genomes_project X 41234220 41235753 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016466.1 MGP_129S1SvImJ_G0014555.1 mouse_genomes_project X 76851505 76851638 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102846.1 MGP_129S1SvImJ_G0040678.1 mouse_genomes_project X 32871976 32876763 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102844.1 MGP_129S1SvImJ_G0040676.1 mouse_genomes_project X 32703087 32703598 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0016728.1 MGP_129S1SvImJ_G0014817.1 mouse_genomes_project X 129281387 129282289 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095644.1 MGP_129S1SvImJ_G0035560.1 mouse_genomes_project X 4625869 4733543 + MGP_129S1SvImJ_P0095644 Sytl5 protein_coding protein_coding MGP_129S1SvImJ_T0095645.1 MGP_129S1SvImJ_G0035560.1 mouse_genomes_project X 4625869 4733543 + MGP_129S1SvImJ_P0095645 Sytl5 protein_coding protein_coding MGP_129S1SvImJ_T0016361.1 MGP_129S1SvImJ_G0014450.1 mouse_genomes_project X 55991823 55992265 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016464.1 MGP_129S1SvImJ_G0014553.1 mouse_genomes_project X 76440924 76442640 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097185.1 MGP_129S1SvImJ_G0036002.1 mouse_genomes_project X 102813682 102913444 + MGP_129S1SvImJ_P0097185 Atp7a protein_coding protein_coding MGP_129S1SvImJ_T0097186.1 MGP_129S1SvImJ_G0036002.1 mouse_genomes_project X 102813728 102913450 + MGP_129S1SvImJ_P0097186 Atp7a protein_coding protein_coding MGP_129S1SvImJ_T0097187.1 MGP_129S1SvImJ_G0036002.1 mouse_genomes_project X 102896196 102907096 + Atp7a protein_coding processed_transcript MGP_129S1SvImJ_T0097188.1 MGP_129S1SvImJ_G0036002.1 mouse_genomes_project X 102904024 102910929 + Atp7a protein_coding retained_intron MGP_129S1SvImJ_T0095629.1 MGP_129S1SvImJ_G0035552.1 mouse_genomes_project X 3764261 3766042 + MGP_129S1SvImJ_P0095629 4930402K13Rik protein_coding protein_coding MGP_129S1SvImJ_T0016615.1 MGP_129S1SvImJ_G0014704.1 mouse_genomes_project X 102348412 102348650 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095708.1 MGP_129S1SvImJ_G0035575.1 mouse_genomes_project X 8523498 8531001 + MGP_129S1SvImJ_P0095708 Gpr82 protein_coding protein_coding MGP_129S1SvImJ_T0016487.1 MGP_129S1SvImJ_G0014576.1 mouse_genomes_project X 83969553 83970561 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011163.1 MGP_129S1SvImJ_G0009279.1 mouse_genomes_project X 47958302 47958382 - Mir20b miRNA miRNA MGP_129S1SvImJ_T0016525.1 MGP_129S1SvImJ_G0014614.1 mouse_genomes_project X 90362863 90364136 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097060.1 MGP_129S1SvImJ_G0035962.1 mouse_genomes_project X 97962055 97966509 + MGP_129S1SvImJ_P0097060 Itgb1bp2 protein_coding protein_coding MGP_129S1SvImJ_T0097061.1 MGP_129S1SvImJ_G0035962.1 mouse_genomes_project X 97965078 97966112 + Itgb1bp2 protein_coding retained_intron MGP_129S1SvImJ_T0101555.1 MGP_129S1SvImJ_G0039622.1 mouse_genomes_project X 155184085 155184217 - Gm25795 snoRNA snoRNA MGP_129S1SvImJ_T0097225.1 MGP_129S1SvImJ_G0036015.1 mouse_genomes_project X 104515674 104536643 + MGP_129S1SvImJ_P0097225 Tbx22 protein_coding protein_coding MGP_129S1SvImJ_T0097226.1 MGP_129S1SvImJ_G0036015.1 mouse_genomes_project X 104515674 104528888 + MGP_129S1SvImJ_P0097226 Tbx22 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097227.1 MGP_129S1SvImJ_G0036015.1 mouse_genomes_project X 104524222 104534596 + MGP_129S1SvImJ_P0097227 Tbx22 protein_coding protein_coding MGP_129S1SvImJ_T0097228.1 MGP_129S1SvImJ_G0036015.1 mouse_genomes_project X 104526677 104536646 + MGP_129S1SvImJ_P0097228 Tbx22 protein_coding protein_coding MGP_129S1SvImJ_T0097229.1 MGP_129S1SvImJ_G0036015.1 mouse_genomes_project X 104526729 104535321 + MGP_129S1SvImJ_P0097229 Tbx22 protein_coding protein_coding MGP_129S1SvImJ_T0016869.1 MGP_129S1SvImJ_G0014958.1 mouse_genomes_project X 155434326 155435023 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011168.1 MGP_129S1SvImJ_G0009284.1 mouse_genomes_project X 48293264 48293333 - Mir450-2 miRNA miRNA MGP_129S1SvImJ_T0009392.1 MGP_129S1SvImJ_G0007541.1 mouse_genomes_project X 63073891 63074900 + 1700036O09Rik lincRNA lincRNA MGP_129S1SvImJ_T0016202.1 MGP_129S1SvImJ_G0014291.1 mouse_genomes_project X 3601875 3602964 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100300.1 MGP_129S1SvImJ_G0038367.1 mouse_genomes_project X 163858755 163858862 - Gm22062 snRNA snRNA MGP_129S1SvImJ_T0016711.1 MGP_129S1SvImJ_G0014800.1 mouse_genomes_project X 123599447 123599950 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097502.1 MGP_129S1SvImJ_G0036107.1 mouse_genomes_project X 134330893 134331945 + MGP_129S1SvImJ_P0097502 H2bfm protein_coding protein_coding MGP_129S1SvImJ_T0096689.1 MGP_129S1SvImJ_G0035855.1 mouse_genomes_project X 70981275 70999717 - MGP_129S1SvImJ_P0096689 Smim9 protein_coding protein_coding MGP_129S1SvImJ_T0096690.1 MGP_129S1SvImJ_G0035855.1 mouse_genomes_project X 70981453 70997584 - MGP_129S1SvImJ_P0096690 Smim9 protein_coding protein_coding MGP_129S1SvImJ_T0096691.1 MGP_129S1SvImJ_G0035855.1 mouse_genomes_project X 70984311 70999734 - Smim9 protein_coding processed_transcript MGP_129S1SvImJ_T0095714.1 MGP_129S1SvImJ_G0035578.1 mouse_genomes_project X 11465816 11468493 + MGP_129S1SvImJ_P0095714 protein_coding protein_coding MGP_129S1SvImJ_T0016479.1 MGP_129S1SvImJ_G0014568.1 mouse_genomes_project X 81880849 81881217 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016457.1 MGP_129S1SvImJ_G0014546.1 mouse_genomes_project X 74662658 74663767 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100229.1 MGP_129S1SvImJ_G0038296.1 mouse_genomes_project X 14232076 14232183 + Gm22783 snRNA snRNA MGP_129S1SvImJ_T0016394.1 MGP_129S1SvImJ_G0014483.1 mouse_genomes_project X 62570597 62572034 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016657.1 MGP_129S1SvImJ_G0014746.1 mouse_genomes_project X 109717497 109718440 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101557.1 MGP_129S1SvImJ_G0039624.1 mouse_genomes_project X 156282350 156282501 + Gm22522 snoRNA snoRNA MGP_129S1SvImJ_T0095630.1 MGP_129S1SvImJ_G0035553.1 mouse_genomes_project X 3869134 3986210 + MGP_129S1SvImJ_P0095630 Lancl3 protein_coding protein_coding MGP_129S1SvImJ_T0097126.1 MGP_129S1SvImJ_G0035983.1 mouse_genomes_project X 99997597 100037202 + MGP_129S1SvImJ_P0097126 Chic1 protein_coding protein_coding MGP_129S1SvImJ_T0095575.1 MGP_129S1SvImJ_G0035538.1 mouse_genomes_project X 2701018 2714609 - MGP_129S1SvImJ_P0095575 Suv39h1 protein_coding protein_coding MGP_129S1SvImJ_T0095576.1 MGP_129S1SvImJ_G0035538.1 mouse_genomes_project X 2701273 2714470 - Suv39h1 protein_coding retained_intron MGP_129S1SvImJ_T0095577.1 MGP_129S1SvImJ_G0035538.1 mouse_genomes_project X 2701282 2714107 - MGP_129S1SvImJ_P0095577 Suv39h1 protein_coding protein_coding MGP_129S1SvImJ_T0095578.1 MGP_129S1SvImJ_G0035538.1 mouse_genomes_project X 2707256 2714578 - MGP_129S1SvImJ_P0095578 Suv39h1 protein_coding protein_coding MGP_129S1SvImJ_T0095579.1 MGP_129S1SvImJ_G0035538.1 mouse_genomes_project X 2710276 2714162 - Suv39h1 protein_coding retained_intron MGP_129S1SvImJ_T0016213.1 MGP_129S1SvImJ_G0014302.1 mouse_genomes_project X 5973032 5973661 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016454.1 MGP_129S1SvImJ_G0014543.1 mouse_genomes_project X 74500460 74500832 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016291.1 MGP_129S1SvImJ_G0014380.1 mouse_genomes_project X 35686867 35687427 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005599.1 MGP_129S1SvImJ_G0004720.1 mouse_genomes_project X 31847832 31848984 + Gm15008 antisense antisense MGP_129S1SvImJ_T0011185.1 MGP_129S1SvImJ_G0009301.1 mouse_genomes_project X 62376463 62376538 - Mir463 miRNA miRNA MGP_129S1SvImJ_T0098716.1 MGP_129S1SvImJ_G0036801.1 mouse_genomes_project X 54425492 54425724 - Gm26351 ribozyme ribozyme MGP_129S1SvImJ_T0096521.1 MGP_129S1SvImJ_G0035834.1 mouse_genomes_project X 70013120 70035860 - MGP_129S1SvImJ_P0096521 Flna protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096522.1 MGP_129S1SvImJ_G0035834.1 mouse_genomes_project X 70013120 70039851 - MGP_129S1SvImJ_P0096522 Flna protein_coding protein_coding MGP_129S1SvImJ_T0096523.1 MGP_129S1SvImJ_G0035834.1 mouse_genomes_project X 70013122 70035996 - MGP_129S1SvImJ_P0096523 Flna protein_coding protein_coding MGP_129S1SvImJ_T0096524.1 MGP_129S1SvImJ_G0035834.1 mouse_genomes_project X 70013200 70036017 - MGP_129S1SvImJ_P0096524 Flna protein_coding protein_coding MGP_129S1SvImJ_T0096525.1 MGP_129S1SvImJ_G0035834.1 mouse_genomes_project X 70013448 70035826 - MGP_129S1SvImJ_P0096525 Flna protein_coding protein_coding MGP_129S1SvImJ_T0096526.1 MGP_129S1SvImJ_G0035834.1 mouse_genomes_project X 70014469 70016139 - Flna protein_coding processed_transcript MGP_129S1SvImJ_T0096527.1 MGP_129S1SvImJ_G0035834.1 mouse_genomes_project X 70014493 70016449 - Flna protein_coding retained_intron MGP_129S1SvImJ_T0096528.1 MGP_129S1SvImJ_G0035834.1 mouse_genomes_project X 70016107 70017280 - Flna protein_coding retained_intron MGP_129S1SvImJ_T0096529.1 MGP_129S1SvImJ_G0035834.1 mouse_genomes_project X 70016531 70018149 - MGP_129S1SvImJ_P0096529 Flna protein_coding protein_coding MGP_129S1SvImJ_T0096530.1 MGP_129S1SvImJ_G0035834.1 mouse_genomes_project X 70016896 70017628 - Flna protein_coding retained_intron MGP_129S1SvImJ_T0096531.1 MGP_129S1SvImJ_G0035834.1 mouse_genomes_project X 70017511 70018723 - MGP_129S1SvImJ_P0096531 Flna protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096532.1 MGP_129S1SvImJ_G0035834.1 mouse_genomes_project X 70017745 70018459 - Flna protein_coding retained_intron MGP_129S1SvImJ_T0096533.1 MGP_129S1SvImJ_G0035834.1 mouse_genomes_project X 70018039 70020230 - MGP_129S1SvImJ_P0096533 Flna protein_coding protein_coding MGP_129S1SvImJ_T0096534.1 MGP_129S1SvImJ_G0035834.1 mouse_genomes_project X 70020355 70025622 - Flna protein_coding processed_transcript MGP_129S1SvImJ_T0096535.1 MGP_129S1SvImJ_G0035834.1 mouse_genomes_project X 70025740 70027398 - Flna protein_coding processed_transcript MGP_129S1SvImJ_T0098718.1 MGP_129S1SvImJ_G0036803.1 mouse_genomes_project X 150680429 150680670 + Gm24687 ribozyme ribozyme MGP_129S1SvImJ_T0011224.1 MGP_129S1SvImJ_G0009340.1 mouse_genomes_project X 103032472 103032582 + Gm27428 miRNA miRNA MGP_129S1SvImJ_T0095750.1 MGP_129S1SvImJ_G0035593.1 mouse_genomes_project X 15502395 15537638 + MGP_129S1SvImJ_P0095750 Rbm10 protein_coding protein_coding MGP_129S1SvImJ_T0095751.1 MGP_129S1SvImJ_G0035593.1 mouse_genomes_project X 15502514 15537651 + MGP_129S1SvImJ_P0095751 Rbm10 protein_coding protein_coding MGP_129S1SvImJ_T0095752.1 MGP_129S1SvImJ_G0035593.1 mouse_genomes_project X 15502806 15537645 + MGP_129S1SvImJ_P0095752 Rbm10 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0095753.1 MGP_129S1SvImJ_G0035593.1 mouse_genomes_project X 15503117 15537651 + MGP_129S1SvImJ_P0095753 Rbm10 protein_coding protein_coding MGP_129S1SvImJ_T0095754.1 MGP_129S1SvImJ_G0035593.1 mouse_genomes_project X 15503119 15535946 + Rbm10 protein_coding processed_transcript MGP_129S1SvImJ_T0095755.1 MGP_129S1SvImJ_G0035593.1 mouse_genomes_project X 15505432 15537434 + MGP_129S1SvImJ_P0095755 Rbm10 protein_coding protein_coding MGP_129S1SvImJ_T0095756.1 MGP_129S1SvImJ_G0035593.1 mouse_genomes_project X 15505432 15537434 + MGP_129S1SvImJ_P0095756 Rbm10 protein_coding protein_coding MGP_129S1SvImJ_T0095757.1 MGP_129S1SvImJ_G0035593.1 mouse_genomes_project X 15505432 15537434 + MGP_129S1SvImJ_P0095757 Rbm10 protein_coding protein_coding MGP_129S1SvImJ_T0016625.1 MGP_129S1SvImJ_G0014714.1 mouse_genomes_project X 103569844 103570062 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096080.1 MGP_129S1SvImJ_G0035703.1 mouse_genomes_project X 44879644 44880604 - MGP_129S1SvImJ_P0096080 Olfr1321 protein_coding protein_coding MGP_129S1SvImJ_T0096066.1 MGP_129S1SvImJ_G0035697.1 mouse_genomes_project X 43853260 43859877 - MGP_129S1SvImJ_P0096066 Gpr119 protein_coding protein_coding MGP_129S1SvImJ_T0016460.1 MGP_129S1SvImJ_G0014549.1 mouse_genomes_project X 75806726 75807569 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016697.1 MGP_129S1SvImJ_G0014786.1 mouse_genomes_project X 117331210 117331862 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011180.1 MGP_129S1SvImJ_G0009296.1 mouse_genomes_project X 62354654 62354719 - Mir742 miRNA miRNA MGP_129S1SvImJ_T0097843.1 MGP_129S1SvImJ_G0036188.1 mouse_genomes_project X 150404008 150576680 - MGP_129S1SvImJ_P0097843 Shroom2 protein_coding protein_coding MGP_129S1SvImJ_T0097844.1 MGP_129S1SvImJ_G0036188.1 mouse_genomes_project X 150404491 150440181 - Shroom2 protein_coding processed_transcript MGP_129S1SvImJ_T0097845.1 MGP_129S1SvImJ_G0036188.1 mouse_genomes_project X 150404491 150576684 - MGP_129S1SvImJ_P0097845 Shroom2 protein_coding protein_coding MGP_129S1SvImJ_T0097846.1 MGP_129S1SvImJ_G0036188.1 mouse_genomes_project X 150407027 150468899 - Shroom2 protein_coding processed_transcript MGP_129S1SvImJ_T0097847.1 MGP_129S1SvImJ_G0036188.1 mouse_genomes_project X 150414921 150439562 - Shroom2 protein_coding processed_transcript MGP_129S1SvImJ_T0097848.1 MGP_129S1SvImJ_G0036188.1 mouse_genomes_project X 150415130 150439748 - Shroom2 protein_coding processed_transcript MGP_129S1SvImJ_T0096806.1 MGP_129S1SvImJ_G0035899.1 mouse_genomes_project X 87663924 87664953 + MGP_129S1SvImJ_P0096806 Gm8914 protein_coding protein_coding MGP_129S1SvImJ_T0009397.1 MGP_129S1SvImJ_G0007546.1 mouse_genomes_project X 81913413 81915184 + Gm14762 lincRNA lincRNA MGP_129S1SvImJ_T0009398.1 MGP_129S1SvImJ_G0007546.1 mouse_genomes_project X 81914182 81922256 + Gm14762 lincRNA lincRNA MGP_129S1SvImJ_T0096716.1 MGP_129S1SvImJ_G0035862.1 mouse_genomes_project X 71423446 71429637 - MGP_129S1SvImJ_P0096716 Rab39b protein_coding protein_coding MGP_129S1SvImJ_T0016680.1 MGP_129S1SvImJ_G0014769.1 mouse_genomes_project X 114526296 114528283 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097287.1 MGP_129S1SvImJ_G0036037.1 mouse_genomes_project X 110056296 110602988 + MGP_129S1SvImJ_P0097287 Dach2 protein_coding protein_coding MGP_129S1SvImJ_T0097288.1 MGP_129S1SvImJ_G0036037.1 mouse_genomes_project X 110056308 110598509 + MGP_129S1SvImJ_P0097288 Dach2 protein_coding protein_coding MGP_129S1SvImJ_T0097289.1 MGP_129S1SvImJ_G0036037.1 mouse_genomes_project X 110056362 110602180 + MGP_129S1SvImJ_P0097289 Dach2 protein_coding protein_coding MGP_129S1SvImJ_T0097290.1 MGP_129S1SvImJ_G0036037.1 mouse_genomes_project X 110057038 110519853 + Dach2 protein_coding retained_intron MGP_129S1SvImJ_T0097291.1 MGP_129S1SvImJ_G0036037.1 mouse_genomes_project X 110057043 110602495 + MGP_129S1SvImJ_P0097291 Dach2 protein_coding protein_coding MGP_129S1SvImJ_T0097292.1 MGP_129S1SvImJ_G0036037.1 mouse_genomes_project X 110057043 110600858 + MGP_129S1SvImJ_P0097292 Dach2 protein_coding protein_coding MGP_129S1SvImJ_T0097293.1 MGP_129S1SvImJ_G0036037.1 mouse_genomes_project X 110057420 110309536 + Dach2 protein_coding processed_transcript MGP_129S1SvImJ_T0097294.1 MGP_129S1SvImJ_G0036037.1 mouse_genomes_project X 110490227 110600858 + Dach2 protein_coding processed_transcript MGP_129S1SvImJ_T0016589.1 MGP_129S1SvImJ_G0014678.1 mouse_genomes_project X 99853965 99854484 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097053.1 MGP_129S1SvImJ_G0035961.1 mouse_genomes_project X 97941642 97953008 + MGP_129S1SvImJ_P0097053 Nono protein_coding protein_coding MGP_129S1SvImJ_T0097054.1 MGP_129S1SvImJ_G0035961.1 mouse_genomes_project X 97941879 97961559 + MGP_129S1SvImJ_P0097054 Nono protein_coding protein_coding MGP_129S1SvImJ_T0097055.1 MGP_129S1SvImJ_G0035961.1 mouse_genomes_project X 97942058 97955782 + Nono protein_coding retained_intron MGP_129S1SvImJ_T0097056.1 MGP_129S1SvImJ_G0035961.1 mouse_genomes_project X 97955941 97957682 + Nono protein_coding retained_intron MGP_129S1SvImJ_T0097057.1 MGP_129S1SvImJ_G0035961.1 mouse_genomes_project X 97956656 97961253 + Nono protein_coding retained_intron MGP_129S1SvImJ_T0097058.1 MGP_129S1SvImJ_G0035961.1 mouse_genomes_project X 97958083 97961054 + Nono protein_coding processed_transcript MGP_129S1SvImJ_T0097059.1 MGP_129S1SvImJ_G0035961.1 mouse_genomes_project X 97959173 97961169 + Nono protein_coding retained_intron MGP_129S1SvImJ_T0016188.1 MGP_129S1SvImJ_G0014277.1 mouse_genomes_project X 2145737 2146300 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016364.1 MGP_129S1SvImJ_G0014453.1 mouse_genomes_project X 56203285 56203860 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016555.1 MGP_129S1SvImJ_G0014644.1 mouse_genomes_project X 94220748 94221475 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098768.1 MGP_129S1SvImJ_G0036853.1 mouse_genomes_project X 92523097 92523233 - Gm24718 scaRNA scaRNA MGP_129S1SvImJ_T0016906.1 MGP_129S1SvImJ_G0014995.1 mouse_genomes_project X 161380344 161380814 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098130.1 MGP_129S1SvImJ_G0036268.1 mouse_genomes_project X 164654523 164720460 - MGP_129S1SvImJ_P0098130 Egfl6 protein_coding protein_coding MGP_129S1SvImJ_T0095646.1 MGP_129S1SvImJ_G0035561.1 mouse_genomes_project X 4776875 4857843 - MGP_129S1SvImJ_P0095646 Srpx protein_coding protein_coding MGP_129S1SvImJ_T0095647.1 MGP_129S1SvImJ_G0035561.1 mouse_genomes_project X 4777453 4857870 - MGP_129S1SvImJ_P0095647 Srpx protein_coding protein_coding MGP_129S1SvImJ_T0095648.1 MGP_129S1SvImJ_G0035561.1 mouse_genomes_project X 4777804 4857766 - MGP_129S1SvImJ_P0095648 Srpx protein_coding protein_coding MGP_129S1SvImJ_T0095649.1 MGP_129S1SvImJ_G0035561.1 mouse_genomes_project X 4813601 4857837 - Srpx protein_coding processed_transcript MGP_129S1SvImJ_T0097424.1 MGP_129S1SvImJ_G0036080.1 mouse_genomes_project X 132173601 132213491 - MGP_129S1SvImJ_P0097424 Zmat1 protein_coding protein_coding MGP_129S1SvImJ_T0097425.1 MGP_129S1SvImJ_G0036080.1 mouse_genomes_project X 132173604 132213515 - MGP_129S1SvImJ_P0097425 Zmat1 protein_coding protein_coding MGP_129S1SvImJ_T0097426.1 MGP_129S1SvImJ_G0036080.1 mouse_genomes_project X 132175006 132181668 - Zmat1 protein_coding retained_intron MGP_129S1SvImJ_T0016411.1 MGP_129S1SvImJ_G0014500.1 mouse_genomes_project X 66062458 66062983 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011158.1 MGP_129S1SvImJ_G0009274.1 mouse_genomes_project X 47586298 47586359 - Mir6384 miRNA miRNA MGP_129S1SvImJ_T0100278.1 MGP_129S1SvImJ_G0038345.1 mouse_genomes_project X 118801031 118801131 + Gm24783 snRNA snRNA MGP_129S1SvImJ_T0102887.1 MGP_129S1SvImJ_G0040719.1 mouse_genomes_project X 158222017 158222310 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0096137.1 MGP_129S1SvImJ_G0035727.1 mouse_genomes_project X 48908339 48909488 - MGP_129S1SvImJ_P0096137 protein_coding protein_coding MGP_129S1SvImJ_T0096742.1 MGP_129S1SvImJ_G0035878.1 mouse_genomes_project X 74236467 74237953 + MGP_129S1SvImJ_P0096742 4930480E11Rik protein_coding protein_coding MGP_129S1SvImJ_T0016892.1 MGP_129S1SvImJ_G0014981.1 mouse_genomes_project X 158269814 158273445 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016838.1 MGP_129S1SvImJ_G0014927.1 mouse_genomes_project X 149247159 149247315 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016896.1 MGP_129S1SvImJ_G0014985.1 mouse_genomes_project X 159438826 159439745 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016641.1 MGP_129S1SvImJ_G0014730.1 mouse_genomes_project X 107223450 107225856 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011219.1 MGP_129S1SvImJ_G0009335.1 mouse_genomes_project X 100237855 100237904 + Mir374c miRNA miRNA MGP_129S1SvImJ_T0098085.1 MGP_129S1SvImJ_G0036257.1 mouse_genomes_project X 162534726 162556879 + MGP_129S1SvImJ_P0098085 Asb11 protein_coding protein_coding MGP_129S1SvImJ_T0098086.1 MGP_129S1SvImJ_G0036257.1 mouse_genomes_project X 162534742 162544730 + Asb11 protein_coding retained_intron MGP_129S1SvImJ_T0098087.1 MGP_129S1SvImJ_G0036257.1 mouse_genomes_project X 162535790 162556873 + MGP_129S1SvImJ_P0098087 Asb11 protein_coding protein_coding MGP_129S1SvImJ_T0016467.1 MGP_129S1SvImJ_G0014556.1 mouse_genomes_project X 77188559 77189286 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016186.1 MGP_129S1SvImJ_G0014275.1 mouse_genomes_project X 1726060 1726491 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101544.1 MGP_129S1SvImJ_G0039611.1 mouse_genomes_project X 132744729 132744843 - Gm24416 snoRNA snoRNA MGP_129S1SvImJ_T0101812.1 MGP_129S1SvImJ_G0039774.1 mouse_genomes_project X 125416544 125417186 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0016748.1 MGP_129S1SvImJ_G0014837.1 mouse_genomes_project X 133816679 133817158 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102877.1 MGP_129S1SvImJ_G0040709.1 mouse_genomes_project X 142890712 142891925 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0016638.1 MGP_129S1SvImJ_G0014727.1 mouse_genomes_project X 105974750 105975634 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009445.1 MGP_129S1SvImJ_G0007573.1 mouse_genomes_project X 159785050 159786904 - Scml1 lincRNA lincRNA MGP_129S1SvImJ_T0096220.1 MGP_129S1SvImJ_G0035757.1 mouse_genomes_project X 55585957 55970741 - MGP_129S1SvImJ_P0096220 Atp11c protein_coding protein_coding MGP_129S1SvImJ_T0096221.1 MGP_129S1SvImJ_G0035757.1 mouse_genomes_project X 55585960 55771609 - MGP_129S1SvImJ_P0096221 Atp11c protein_coding protein_coding MGP_129S1SvImJ_T0096222.1 MGP_129S1SvImJ_G0035757.1 mouse_genomes_project X 55585960 55771609 - MGP_129S1SvImJ_P0096222 Atp11c protein_coding protein_coding MGP_129S1SvImJ_T0096223.1 MGP_129S1SvImJ_G0035757.1 mouse_genomes_project X 55588290 55630691 - Atp11c protein_coding processed_transcript MGP_129S1SvImJ_T0096224.1 MGP_129S1SvImJ_G0035757.1 mouse_genomes_project X 55598136 55970741 - Atp11c protein_coding processed_transcript MGP_129S1SvImJ_T0016823.1 MGP_129S1SvImJ_G0014912.1 mouse_genomes_project X 144113690 144114164 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016925.1 MGP_129S1SvImJ_G0015014.1 mouse_genomes_project X 166745798 166746131 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016792.1 MGP_129S1SvImJ_G0014881.1 mouse_genomes_project X 139559471 139559831 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009435.1 MGP_129S1SvImJ_G0007569.1 mouse_genomes_project X 148576448 148576989 - Gm27191 lincRNA lincRNA MGP_129S1SvImJ_T0016725.1 MGP_129S1SvImJ_G0014814.1 mouse_genomes_project X 128280714 128282024 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016443.1 MGP_129S1SvImJ_G0014532.1 mouse_genomes_project X 72760399 72760654 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016435.1 MGP_129S1SvImJ_G0014524.1 mouse_genomes_project X 71303110 71303758 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016349.1 MGP_129S1SvImJ_G0014438.1 mouse_genomes_project X 53535774 53536098 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016463.1 MGP_129S1SvImJ_G0014552.1 mouse_genomes_project X 76271902 76272587 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100259.1 MGP_129S1SvImJ_G0038326.1 mouse_genomes_project X 89239639 89239744 + Gm25332 snRNA snRNA MGP_129S1SvImJ_T0016551.1 MGP_129S1SvImJ_G0014640.1 mouse_genomes_project X 93335932 93336467 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097004.1 MGP_129S1SvImJ_G0035952.1 mouse_genomes_project X 97582144 97715904 - MGP_129S1SvImJ_P0097004 Snx12 protein_coding protein_coding MGP_129S1SvImJ_T0097005.1 MGP_129S1SvImJ_G0035952.1 mouse_genomes_project X 97705303 97715914 - MGP_129S1SvImJ_P0097005 Snx12 protein_coding protein_coding MGP_129S1SvImJ_T0097006.1 MGP_129S1SvImJ_G0035952.1 mouse_genomes_project X 97705303 97715900 - MGP_129S1SvImJ_P0097006 Snx12 protein_coding protein_coding MGP_129S1SvImJ_T0097007.1 MGP_129S1SvImJ_G0035952.1 mouse_genomes_project X 97706829 97707882 - Snx12 protein_coding processed_transcript MGP_129S1SvImJ_T0097013.1 MGP_129S1SvImJ_G0035955.1 mouse_genomes_project X 97760705 97768310 - MGP_129S1SvImJ_P0097013 Gm20489 protein_coding protein_coding MGP_129S1SvImJ_T0095830.1 MGP_129S1SvImJ_G0035614.1 mouse_genomes_project X 18837936 18840120 - MGP_129S1SvImJ_P0095830 Gm4985 protein_coding protein_coding MGP_129S1SvImJ_T0095474.1 MGP_129S1SvImJ_G0035517.1 mouse_genomes_project X 2279788 2284051 - MGP_129S1SvImJ_P0095474 Plp2 protein_coding protein_coding MGP_129S1SvImJ_T0095475.1 MGP_129S1SvImJ_G0035517.1 mouse_genomes_project X 2280703 2283974 - Plp2 protein_coding retained_intron MGP_129S1SvImJ_T0100246.1 MGP_129S1SvImJ_G0038313.1 mouse_genomes_project X 53332730 53332837 + Gm25023 snRNA snRNA MGP_129S1SvImJ_T0100258.1 MGP_129S1SvImJ_G0038325.1 mouse_genomes_project X 84397035 84397142 + Gm25006 snRNA snRNA MGP_129S1SvImJ_T0098697.1 MGP_129S1SvImJ_G0036782.1 mouse_genomes_project X 166093812 166093922 + Gm24772 rRNA rRNA MGP_129S1SvImJ_T0005590.1 MGP_129S1SvImJ_G0004716.1 mouse_genomes_project X 2682042 2712088 + Gm14820 antisense antisense MGP_129S1SvImJ_T0005591.1 MGP_129S1SvImJ_G0004716.1 mouse_genomes_project X 2689115 2699672 + Gm14820 antisense antisense MGP_129S1SvImJ_T0005592.1 MGP_129S1SvImJ_G0004716.1 mouse_genomes_project X 2689191 2712808 + Gm14820 antisense antisense MGP_129S1SvImJ_T0005593.1 MGP_129S1SvImJ_G0004716.1 mouse_genomes_project X 2689271 2714468 + Gm14820 antisense antisense MGP_129S1SvImJ_T0005594.1 MGP_129S1SvImJ_G0004716.1 mouse_genomes_project X 2691478 2712805 + Gm14820 antisense antisense MGP_129S1SvImJ_T0097829.1 MGP_129S1SvImJ_G0036184.1 mouse_genomes_project X 149993318 150034038 + MGP_129S1SvImJ_P0097829 Kdm5c protein_coding protein_coding MGP_129S1SvImJ_T0097830.1 MGP_129S1SvImJ_G0036184.1 mouse_genomes_project X 149993527 150034803 + MGP_129S1SvImJ_P0097830 Kdm5c protein_coding protein_coding MGP_129S1SvImJ_T0097831.1 MGP_129S1SvImJ_G0036184.1 mouse_genomes_project X 149993552 150007051 + Kdm5c protein_coding retained_intron MGP_129S1SvImJ_T0097832.1 MGP_129S1SvImJ_G0036184.1 mouse_genomes_project X 149993570 150034042 + MGP_129S1SvImJ_P0097832 Kdm5c protein_coding protein_coding MGP_129S1SvImJ_T0097833.1 MGP_129S1SvImJ_G0036184.1 mouse_genomes_project X 150030075 150031826 + MGP_129S1SvImJ_P0097833 Kdm5c protein_coding protein_coding MGP_129S1SvImJ_T0097834.1 MGP_129S1SvImJ_G0036184.1 mouse_genomes_project X 150032182 150033666 + MGP_129S1SvImJ_P0097834 Kdm5c protein_coding protein_coding MGP_129S1SvImJ_T0095571.1 MGP_129S1SvImJ_G0035536.1 mouse_genomes_project X 2588189 2596810 - MGP_129S1SvImJ_P0095571 Gata1 protein_coding protein_coding MGP_129S1SvImJ_T0095572.1 MGP_129S1SvImJ_G0035536.1 mouse_genomes_project X 2591339 2608483 - MGP_129S1SvImJ_P0095572 Gata1 protein_coding protein_coding MGP_129S1SvImJ_T0095573.1 MGP_129S1SvImJ_G0035536.1 mouse_genomes_project X 2591928 2593066 - MGP_129S1SvImJ_P0095573 Gata1 protein_coding protein_coding MGP_129S1SvImJ_T0009450.1 MGP_129S1SvImJ_G0007578.1 mouse_genomes_project X 165225153 165232344 - Gm8817 lincRNA lincRNA MGP_129S1SvImJ_T0009451.1 MGP_129S1SvImJ_G0007578.1 mouse_genomes_project X 165225295 165232344 - Gm8817 lincRNA lincRNA MGP_129S1SvImJ_T0009452.1 MGP_129S1SvImJ_G0007578.1 mouse_genomes_project X 165225511 165230353 - Gm8817 lincRNA lincRNA MGP_129S1SvImJ_T0101518.1 MGP_129S1SvImJ_G0039585.1 mouse_genomes_project X 69587799 69587864 + Gm23615 snoRNA snoRNA MGP_129S1SvImJ_T0016530.1 MGP_129S1SvImJ_G0014619.1 mouse_genomes_project X 90726247 90727148 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016787.1 MGP_129S1SvImJ_G0014876.1 mouse_genomes_project X 139362019 139362290 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016409.1 MGP_129S1SvImJ_G0014498.1 mouse_genomes_project X 66046776 66047724 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097468.1 MGP_129S1SvImJ_G0036098.1 mouse_genomes_project X 133641748 133643272 + MGP_129S1SvImJ_P0097468 Ngfrap1 protein_coding protein_coding MGP_129S1SvImJ_T0097469.1 MGP_129S1SvImJ_G0036098.1 mouse_genomes_project X 133641756 133643272 + MGP_129S1SvImJ_P0097469 Ngfrap1 protein_coding protein_coding MGP_129S1SvImJ_T0097470.1 MGP_129S1SvImJ_G0036098.1 mouse_genomes_project X 133641800 133643258 + MGP_129S1SvImJ_P0097470 Ngfrap1 protein_coding protein_coding MGP_129S1SvImJ_T0097471.1 MGP_129S1SvImJ_G0036098.1 mouse_genomes_project X 133642076 133643212 + MGP_129S1SvImJ_P0097471 Ngfrap1 protein_coding protein_coding MGP_129S1SvImJ_T0097410.1 MGP_129S1SvImJ_G0036077.1 mouse_genomes_project X 131945069 131950402 + MGP_129S1SvImJ_P0097410 Armcx3 protein_coding protein_coding MGP_129S1SvImJ_T0097411.1 MGP_129S1SvImJ_G0036077.1 mouse_genomes_project X 131945081 131949082 + MGP_129S1SvImJ_P0097411 Armcx3 protein_coding protein_coding MGP_129S1SvImJ_T0097412.1 MGP_129S1SvImJ_G0036077.1 mouse_genomes_project X 131945121 131950432 + MGP_129S1SvImJ_P0097412 Armcx3 protein_coding protein_coding MGP_129S1SvImJ_T0016778.1 MGP_129S1SvImJ_G0014867.1 mouse_genomes_project X 138394039 138394625 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016325.1 MGP_129S1SvImJ_G0014414.1 mouse_genomes_project X 44731859 44732118 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096343.1 MGP_129S1SvImJ_G0035799.1 mouse_genomes_project X 68763534 68766965 + MGP_129S1SvImJ_P0096343 Pnma3 protein_coding protein_coding MGP_129S1SvImJ_T0016645.1 MGP_129S1SvImJ_G0014734.1 mouse_genomes_project X 108570206 108570851 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009425.1 MGP_129S1SvImJ_G0007560.1 mouse_genomes_project X 111706605 111708216 + 4930555B12Rik lincRNA lincRNA MGP_129S1SvImJ_T0016800.1 MGP_129S1SvImJ_G0014889.1 mouse_genomes_project X 140303413 140303876 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016523.1 MGP_129S1SvImJ_G0014612.1 mouse_genomes_project X 90293223 90296749 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011806.1 MGP_129S1SvImJ_G0009922.1 mouse_genomes_project X 167512311 167512480 + Gm27980 misc_RNA misc_RNA MGP_129S1SvImJ_T0016712.1 MGP_129S1SvImJ_G0014801.1 mouse_genomes_project X 123898422 123900459 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098127.1 MGP_129S1SvImJ_G0036267.1 mouse_genomes_project X 164629075 164641320 - MGP_129S1SvImJ_P0098127 Tceanc protein_coding protein_coding MGP_129S1SvImJ_T0098128.1 MGP_129S1SvImJ_G0036267.1 mouse_genomes_project X 164631582 164632662 - MGP_129S1SvImJ_P0098128 Tceanc protein_coding protein_coding MGP_129S1SvImJ_T0098129.1 MGP_129S1SvImJ_G0036267.1 mouse_genomes_project X 164632556 164650101 - MGP_129S1SvImJ_P0098129 Tceanc protein_coding protein_coding MGP_129S1SvImJ_T0016574.1 MGP_129S1SvImJ_G0014663.1 mouse_genomes_project X 98349064 98349945 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016335.1 MGP_129S1SvImJ_G0014424.1 mouse_genomes_project X 48098868 48099359 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095845.1 MGP_129S1SvImJ_G0035620.1 mouse_genomes_project X 31343948 31349395 - Gm14569 protein_coding processed_transcript MGP_129S1SvImJ_T0095846.1 MGP_129S1SvImJ_G0035620.1 mouse_genomes_project X 31343948 31347028 - Gm14569 protein_coding processed_transcript MGP_129S1SvImJ_T0095847.1 MGP_129S1SvImJ_G0035620.1 mouse_genomes_project X 31343948 31399972 - MGP_129S1SvImJ_P0095847 Gm14569 protein_coding protein_coding MGP_129S1SvImJ_T0095848.1 MGP_129S1SvImJ_G0035620.1 mouse_genomes_project X 31358558 31392377 - Gm14569 protein_coding processed_transcript MGP_129S1SvImJ_T0097125.1 MGP_129S1SvImJ_G0035982.1 mouse_genomes_project X 99952256 99961450 + MGP_129S1SvImJ_P0097125 Cdx4 protein_coding protein_coding MGP_129S1SvImJ_T0100283.1 MGP_129S1SvImJ_G0038350.1 mouse_genomes_project X 135756144 135756251 - Gm22057 snRNA snRNA MGP_129S1SvImJ_T0097371.1 MGP_129S1SvImJ_G0036067.1 mouse_genomes_project X 131584202 131632955 + MGP_129S1SvImJ_P0097371 Drp2 protein_coding protein_coding MGP_129S1SvImJ_T0097372.1 MGP_129S1SvImJ_G0036067.1 mouse_genomes_project X 131584279 131636819 + MGP_129S1SvImJ_P0097372 Drp2 protein_coding protein_coding MGP_129S1SvImJ_T0097373.1 MGP_129S1SvImJ_G0036067.1 mouse_genomes_project X 131584410 131633863 + MGP_129S1SvImJ_P0097373 Drp2 protein_coding protein_coding MGP_129S1SvImJ_T0097374.1 MGP_129S1SvImJ_G0036067.1 mouse_genomes_project X 131584421 131633262 + MGP_129S1SvImJ_P0097374 Drp2 protein_coding protein_coding MGP_129S1SvImJ_T0097375.1 MGP_129S1SvImJ_G0036067.1 mouse_genomes_project X 131604062 131615671 + Drp2 protein_coding processed_transcript MGP_129S1SvImJ_T0097376.1 MGP_129S1SvImJ_G0036067.1 mouse_genomes_project X 131604116 131633655 + Drp2 protein_coding retained_intron MGP_129S1SvImJ_T0005587.1 MGP_129S1SvImJ_G0004714.1 mouse_genomes_project X 2183682 2191103 + Ppp1r3fos antisense antisense MGP_129S1SvImJ_T0005588.1 MGP_129S1SvImJ_G0004714.1 mouse_genomes_project X 2184574 2188502 + Ppp1r3fos antisense antisense MGP_129S1SvImJ_T0011787.1 MGP_129S1SvImJ_G0009903.1 mouse_genomes_project X 100271875 100271968 + Gm27987 misc_RNA misc_RNA MGP_129S1SvImJ_T0016388.1 MGP_129S1SvImJ_G0014477.1 mouse_genomes_project X 60615610 60615860 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016565.1 MGP_129S1SvImJ_G0014654.1 mouse_genomes_project X 96785409 96786564 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096945.1 MGP_129S1SvImJ_G0035937.1 mouse_genomes_project X 96260525 96289496 + MGP_129S1SvImJ_P0096945 Tmem28 protein_coding protein_coding MGP_129S1SvImJ_T0011190.1 MGP_129S1SvImJ_G0009306.1 mouse_genomes_project X 62390996 62391071 - Mir470 miRNA miRNA MGP_129S1SvImJ_T0016723.1 MGP_129S1SvImJ_G0014812.1 mouse_genomes_project X 127660678 127661120 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095559.1 MGP_129S1SvImJ_G0035533.1 mouse_genomes_project X 2546286 2550875 + MGP_129S1SvImJ_P0095559 Pcsk1n protein_coding protein_coding MGP_129S1SvImJ_T0095927.1 MGP_129S1SvImJ_G0035664.1 mouse_genomes_project X 33270146 33291814 + MGP_129S1SvImJ_P0095927 Atp1b4 protein_coding protein_coding MGP_129S1SvImJ_T0095928.1 MGP_129S1SvImJ_G0035664.1 mouse_genomes_project X 33270146 33291814 + MGP_129S1SvImJ_P0095928 Atp1b4 protein_coding protein_coding MGP_129S1SvImJ_T0016491.1 MGP_129S1SvImJ_G0014580.1 mouse_genomes_project X 84791261 84792271 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097724.1 MGP_129S1SvImJ_G0036170.1 mouse_genomes_project X 148321108 148357051 + MGP_129S1SvImJ_P0097724 Pfkfb1 protein_coding protein_coding MGP_129S1SvImJ_T0097725.1 MGP_129S1SvImJ_G0036170.1 mouse_genomes_project X 148321135 148351020 + Pfkfb1 protein_coding processed_transcript MGP_129S1SvImJ_T0097726.1 MGP_129S1SvImJ_G0036170.1 mouse_genomes_project X 148322800 148372262 + MGP_129S1SvImJ_P0097726 Pfkfb1 protein_coding protein_coding MGP_129S1SvImJ_T0097727.1 MGP_129S1SvImJ_G0036170.1 mouse_genomes_project X 148327357 148372262 + MGP_129S1SvImJ_P0097727 Pfkfb1 protein_coding protein_coding MGP_129S1SvImJ_T0097728.1 MGP_129S1SvImJ_G0036170.1 mouse_genomes_project X 148327489 148372241 + Pfkfb1 protein_coding retained_intron MGP_129S1SvImJ_T0097729.1 MGP_129S1SvImJ_G0036170.1 mouse_genomes_project X 148352021 148356574 + Pfkfb1 protein_coding processed_transcript MGP_129S1SvImJ_T0097730.1 MGP_129S1SvImJ_G0036170.1 mouse_genomes_project X 148357208 148370361 + Pfkfb1 protein_coding processed_transcript MGP_129S1SvImJ_T0018672.1 MGP_129S1SvImJ_G0015783.1 mouse_genomes_project X 69570503 69572903 + Gm14817 processed_transcript processed_transcript MGP_129S1SvImJ_T0009383.1 MGP_129S1SvImJ_G0007536.1 mouse_genomes_project X 44488818 44522086 - Gm14696 lincRNA lincRNA MGP_129S1SvImJ_T0101796.1 MGP_129S1SvImJ_G0039764.1 mouse_genomes_project X 17361254 17362017 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101797.1 MGP_129S1SvImJ_G0039764.1 mouse_genomes_project X 17361351 17361960 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0098154.1 MGP_129S1SvImJ_G0036275.1 mouse_genomes_project X 167001652 167521738 + MGP_129S1SvImJ_P0098154 Arhgap6 protein_coding protein_coding MGP_129S1SvImJ_T0098155.1 MGP_129S1SvImJ_G0036275.1 mouse_genomes_project X 167252692 167476853 + Arhgap6 protein_coding retained_intron MGP_129S1SvImJ_T0098156.1 MGP_129S1SvImJ_G0036275.1 mouse_genomes_project X 167252692 167521738 + MGP_129S1SvImJ_P0098156 Arhgap6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0098157.1 MGP_129S1SvImJ_G0036275.1 mouse_genomes_project X 167252692 167521738 + MGP_129S1SvImJ_P0098157 Arhgap6 protein_coding protein_coding MGP_129S1SvImJ_T0098158.1 MGP_129S1SvImJ_G0036275.1 mouse_genomes_project X 167252692 167479375 + MGP_129S1SvImJ_P0098158 Arhgap6 protein_coding protein_coding MGP_129S1SvImJ_T0098159.1 MGP_129S1SvImJ_G0036275.1 mouse_genomes_project X 167252692 167484255 + MGP_129S1SvImJ_P0098159 Arhgap6 protein_coding protein_coding MGP_129S1SvImJ_T0098160.1 MGP_129S1SvImJ_G0036275.1 mouse_genomes_project X 167332250 167521738 + MGP_129S1SvImJ_P0098160 Arhgap6 protein_coding protein_coding MGP_129S1SvImJ_T0098166.1 MGP_129S1SvImJ_G0036275.1 mouse_genomes_project X 167436245 167512414 + MGP_129S1SvImJ_P0098166 Arhgap6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0097268.1 MGP_129S1SvImJ_G0036030.1 mouse_genomes_project X 109000726 109005530 + MGP_129S1SvImJ_P0097268 4933403O08Rik protein_coding protein_coding MGP_129S1SvImJ_T0097269.1 MGP_129S1SvImJ_G0036030.1 mouse_genomes_project X 109002151 109005530 + MGP_129S1SvImJ_P0097269 4933403O08Rik protein_coding protein_coding MGP_129S1SvImJ_T0097270.1 MGP_129S1SvImJ_G0036030.1 mouse_genomes_project X 109002260 109005457 + MGP_129S1SvImJ_P0097270 4933403O08Rik protein_coding protein_coding MGP_129S1SvImJ_T0096845.1 MGP_129S1SvImJ_G0035910.1 mouse_genomes_project X 90764552 90777860 - MGP_129S1SvImJ_P0096845 Fam90a1b protein_coding protein_coding MGP_129S1SvImJ_T0096846.1 MGP_129S1SvImJ_G0035910.1 mouse_genomes_project X 90765371 90776844 - MGP_129S1SvImJ_P0096846 Fam90a1b protein_coding protein_coding MGP_129S1SvImJ_T0096847.1 MGP_129S1SvImJ_G0035910.1 mouse_genomes_project X 90766655 90777133 - MGP_129S1SvImJ_P0096847 Fam90a1b protein_coding protein_coding MGP_129S1SvImJ_T0097381.1 MGP_129S1SvImJ_G0036070.1 mouse_genomes_project X 131718207 131720299 - MGP_129S1SvImJ_P0097381 protein_coding protein_coding MGP_129S1SvImJ_T0009448.1 MGP_129S1SvImJ_G0007576.1 mouse_genomes_project X 164801900 164830812 + Gm1720 lincRNA lincRNA MGP_129S1SvImJ_T0016632.1 MGP_129S1SvImJ_G0014721.1 mouse_genomes_project X 104193785 104194489 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016636.1 MGP_129S1SvImJ_G0014725.1 mouse_genomes_project X 105732559 105732715 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096736.1 MGP_129S1SvImJ_G0035873.1 mouse_genomes_project X 73695968 73701283 + MGP_129S1SvImJ_P0096736 protein_coding protein_coding MGP_129S1SvImJ_T0101539.1 MGP_129S1SvImJ_G0039606.1 mouse_genomes_project X 126188491 126188623 - Gm26029 snoRNA snoRNA MGP_129S1SvImJ_T0016211.1 MGP_129S1SvImJ_G0014300.1 mouse_genomes_project X 5621301 5621858 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016281.1 MGP_129S1SvImJ_G0014370.1 mouse_genomes_project X 34100951 34101898 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016227.1 MGP_129S1SvImJ_G0014316.1 mouse_genomes_project X 8164807 8172477 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016182.1 MGP_129S1SvImJ_G0014271.1 mouse_genomes_project X 465010 466831 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016512.1 MGP_129S1SvImJ_G0014601.1 mouse_genomes_project X 87612478 87613142 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016236.1 MGP_129S1SvImJ_G0014325.1 mouse_genomes_project X 10397602 10397939 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009374.1 MGP_129S1SvImJ_G0007529.1 mouse_genomes_project X 10796328 10806348 - lincRNA lincRNA MGP_129S1SvImJ_T0009375.1 MGP_129S1SvImJ_G0007529.1 mouse_genomes_project X 10796328 10799002 - lincRNA lincRNA MGP_129S1SvImJ_T0016540.1 MGP_129S1SvImJ_G0014629.1 mouse_genomes_project X 91219617 91220247 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100226.1 MGP_129S1SvImJ_G0038293.1 mouse_genomes_project X 9225610 9225801 - Gm25202 snRNA snRNA MGP_129S1SvImJ_T0101558.1 MGP_129S1SvImJ_G0039625.1 mouse_genomes_project X 160763111 160763232 + Gm23786 snoRNA snoRNA MGP_129S1SvImJ_T0097239.1 MGP_129S1SvImJ_G0036020.1 mouse_genomes_project X 105570488 105673498 - MGP_129S1SvImJ_P0097239 Brwd3 protein_coding protein_coding MGP_129S1SvImJ_T0097240.1 MGP_129S1SvImJ_G0036020.1 mouse_genomes_project X 105576040 105673522 - MGP_129S1SvImJ_P0097240 Brwd3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097241.1 MGP_129S1SvImJ_G0036020.1 mouse_genomes_project X 105576040 105673522 - MGP_129S1SvImJ_P0097241 Brwd3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097242.1 MGP_129S1SvImJ_G0036020.1 mouse_genomes_project X 105642293 105673490 - Brwd3 protein_coding retained_intron MGP_129S1SvImJ_T0097243.1 MGP_129S1SvImJ_G0036020.1 mouse_genomes_project X 105660063 105673496 - MGP_129S1SvImJ_P0097243 Brwd3 protein_coding protein_coding MGP_129S1SvImJ_T0095943.1 MGP_129S1SvImJ_G0035668.1 mouse_genomes_project X 33605985 33610302 - MGP_129S1SvImJ_P0095943 C1galt1c1 protein_coding protein_coding MGP_129S1SvImJ_T0096902.1 MGP_129S1SvImJ_G0035926.1 mouse_genomes_project X 92847542 92971540 + MGP_129S1SvImJ_P0096902 Heph protein_coding protein_coding MGP_129S1SvImJ_T0096903.1 MGP_129S1SvImJ_G0035926.1 mouse_genomes_project X 92848556 92925937 + MGP_129S1SvImJ_P0096903 Heph protein_coding protein_coding MGP_129S1SvImJ_T0096904.1 MGP_129S1SvImJ_G0035926.1 mouse_genomes_project X 92848573 92971537 + MGP_129S1SvImJ_P0096904 Heph protein_coding protein_coding MGP_129S1SvImJ_T0096905.1 MGP_129S1SvImJ_G0035926.1 mouse_genomes_project X 92848611 92870250 + Heph protein_coding retained_intron MGP_129S1SvImJ_T0096906.1 MGP_129S1SvImJ_G0035926.1 mouse_genomes_project X 92848611 92881056 + Heph protein_coding retained_intron MGP_129S1SvImJ_T0016767.1 MGP_129S1SvImJ_G0014856.1 mouse_genomes_project X 136200918 136203567 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096322.1 MGP_129S1SvImJ_G0035790.1 mouse_genomes_project X 67887273 67888221 + MGP_129S1SvImJ_P0096322 Magea4 protein_coding protein_coding MGP_129S1SvImJ_T0016296.1 MGP_129S1SvImJ_G0014385.1 mouse_genomes_project X 36726896 36727280 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011231.1 MGP_129S1SvImJ_G0009347.1 mouse_genomes_project X 133135323 133135427 - Mir1970 miRNA miRNA MGP_129S1SvImJ_T0101510.1 MGP_129S1SvImJ_G0039577.1 mouse_genomes_project X 37747989 37748119 - Gm23705 snoRNA snoRNA MGP_129S1SvImJ_T0096006.1 MGP_129S1SvImJ_G0035684.1 mouse_genomes_project X 42926041 43004177 - MGP_129S1SvImJ_P0096006 Smarca1 protein_coding protein_coding MGP_129S1SvImJ_T0096007.1 MGP_129S1SvImJ_G0035684.1 mouse_genomes_project X 42926043 43004177 - MGP_129S1SvImJ_P0096007 Smarca1 protein_coding protein_coding MGP_129S1SvImJ_T0096008.1 MGP_129S1SvImJ_G0035684.1 mouse_genomes_project X 42926306 43004210 - MGP_129S1SvImJ_P0096008 Smarca1 protein_coding protein_coding MGP_129S1SvImJ_T0096009.1 MGP_129S1SvImJ_G0035684.1 mouse_genomes_project X 42959362 43004054 - MGP_129S1SvImJ_P0096009 Smarca1 protein_coding protein_coding MGP_129S1SvImJ_T0096010.1 MGP_129S1SvImJ_G0035684.1 mouse_genomes_project X 42985533 43004090 - MGP_129S1SvImJ_P0096010 Smarca1 protein_coding protein_coding MGP_129S1SvImJ_T0096011.1 MGP_129S1SvImJ_G0035684.1 mouse_genomes_project X 42998810 43004599 - MGP_129S1SvImJ_P0096011 Smarca1 protein_coding protein_coding MGP_129S1SvImJ_T0096012.1 MGP_129S1SvImJ_G0035684.1 mouse_genomes_project X 43001471 43004632 - Smarca1 protein_coding processed_transcript MGP_129S1SvImJ_T0016596.1 MGP_129S1SvImJ_G0014685.1 mouse_genomes_project X 100154227 100155005 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016441.1 MGP_129S1SvImJ_G0014530.1 mouse_genomes_project X 72489585 72490302 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097541.1 MGP_129S1SvImJ_G0036120.1 mouse_genomes_project X 136646362 136648198 + MGP_129S1SvImJ_P0097541 4933428M09Rik protein_coding protein_coding MGP_129S1SvImJ_T0016863.1 MGP_129S1SvImJ_G0014952.1 mouse_genomes_project X 154428163 154429133 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096860.1 MGP_129S1SvImJ_G0035915.1 mouse_genomes_project X 91361070 91365121 - MGP_129S1SvImJ_P0096860 Spin4 protein_coding protein_coding MGP_129S1SvImJ_T0102881.1 MGP_129S1SvImJ_G0040713.1 mouse_genomes_project X 150919049 150919762 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0016742.1 MGP_129S1SvImJ_G0014831.1 mouse_genomes_project X 132026494 132027356 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102886.1 MGP_129S1SvImJ_G0040718.1 mouse_genomes_project X 156987561 156993028 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0096483.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69798446 69809153 - MGP_129S1SvImJ_P0096483 Irak1 protein_coding protein_coding MGP_129S1SvImJ_T0096484.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69798450 69809150 - MGP_129S1SvImJ_P0096484 Irak1 protein_coding protein_coding MGP_129S1SvImJ_T0096485.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69798458 69809150 - MGP_129S1SvImJ_P0096485 Irak1 protein_coding protein_coding MGP_129S1SvImJ_T0096486.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69798458 69809150 - MGP_129S1SvImJ_P0096486 Irak1 protein_coding protein_coding MGP_129S1SvImJ_T0096487.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69799327 69809061 - Irak1 protein_coding retained_intron MGP_129S1SvImJ_T0096488.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69799327 69809061 - Irak1 protein_coding retained_intron MGP_129S1SvImJ_T0096489.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69799492 69809148 - MGP_129S1SvImJ_P0096489 Irak1 protein_coding protein_coding MGP_129S1SvImJ_T0096490.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69799879 69802856 - MGP_129S1SvImJ_P0096490 Irak1 protein_coding protein_coding MGP_129S1SvImJ_T0096491.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69799893 69804463 - MGP_129S1SvImJ_P0096491 Irak1 protein_coding protein_coding MGP_129S1SvImJ_T0096492.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69799961 69808980 - MGP_129S1SvImJ_P0096492 Irak1 protein_coding protein_coding MGP_129S1SvImJ_T0096493.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69799961 69808980 - MGP_129S1SvImJ_P0096493 Irak1 protein_coding protein_coding MGP_129S1SvImJ_T0096494.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69801069 69805510 - MGP_129S1SvImJ_P0096494 Irak1 protein_coding protein_coding MGP_129S1SvImJ_T0096495.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69801651 69807017 - MGP_129S1SvImJ_P0096495 Irak1 protein_coding protein_coding MGP_129S1SvImJ_T0096496.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69805521 69807172 - Irak1 protein_coding retained_intron MGP_129S1SvImJ_T0096497.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69805521 69807612 - MGP_129S1SvImJ_P0096497 Irak1 protein_coding protein_coding MGP_129S1SvImJ_T0096498.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69806707 69807694 - MGP_129S1SvImJ_P0096498 Irak1 protein_coding protein_coding MGP_129S1SvImJ_T0096499.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69806749 69807465 - MGP_129S1SvImJ_P0096499 Irak1 protein_coding protein_coding MGP_129S1SvImJ_T0096500.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69806758 69808962 - Irak1 protein_coding processed_transcript MGP_129S1SvImJ_T0096501.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69807138 69809043 - Irak1 protein_coding retained_intron MGP_129S1SvImJ_T0096502.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69807153 69808611 - Irak1 protein_coding retained_intron MGP_129S1SvImJ_T0096503.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69807266 69808743 - Irak1 protein_coding processed_transcript MGP_129S1SvImJ_T0096504.1 MGP_129S1SvImJ_G0035829.1 mouse_genomes_project X 69807615 69809066 - Irak1 protein_coding retained_intron MGP_129S1SvImJ_T0096310.1 MGP_129S1SvImJ_G0035785.1 mouse_genomes_project X 67488218 67497320 + MGP_129S1SvImJ_P0096310 protein_coding protein_coding MGP_129S1SvImJ_T0096311.1 MGP_129S1SvImJ_G0035785.1 mouse_genomes_project X 67489084 67514382 + protein_coding processed_transcript MGP_129S1SvImJ_T0095816.1 MGP_129S1SvImJ_G0035609.1 mouse_genomes_project X 16632297 16662329 + MGP_129S1SvImJ_P0095816 Slc6a14 protein_coding protein_coding MGP_129S1SvImJ_T0095695.1 MGP_129S1SvImJ_G0035573.1 mouse_genomes_project X 8381920 8667704 - MGP_129S1SvImJ_P0095695 Cask protein_coding unknown_likely_coding MGP_129S1SvImJ_T0095696.1 MGP_129S1SvImJ_G0035573.1 mouse_genomes_project X 8381924 8719290 - MGP_129S1SvImJ_P0095696 Cask protein_coding protein_coding MGP_129S1SvImJ_T0095697.1 MGP_129S1SvImJ_G0035573.1 mouse_genomes_project X 8381924 8657607 - MGP_129S1SvImJ_P0095697 Cask protein_coding protein_coding MGP_129S1SvImJ_T0095698.1 MGP_129S1SvImJ_G0035573.1 mouse_genomes_project X 8381924 8719327 - MGP_129S1SvImJ_P0095698 Cask protein_coding protein_coding MGP_129S1SvImJ_T0095699.1 MGP_129S1SvImJ_G0035573.1 mouse_genomes_project X 8386171 8719305 - MGP_129S1SvImJ_P0095699 Cask protein_coding protein_coding MGP_129S1SvImJ_T0095700.1 MGP_129S1SvImJ_G0035573.1 mouse_genomes_project X 8386622 8391609 - MGP_129S1SvImJ_P0095700 Cask protein_coding protein_coding MGP_129S1SvImJ_T0095701.1 MGP_129S1SvImJ_G0035573.1 mouse_genomes_project X 8386920 8402507 - MGP_129S1SvImJ_P0095701 Cask protein_coding protein_coding MGP_129S1SvImJ_T0095702.1 MGP_129S1SvImJ_G0035573.1 mouse_genomes_project X 8398177 8424134 - MGP_129S1SvImJ_P0095702 Cask protein_coding protein_coding MGP_129S1SvImJ_T0095703.1 MGP_129S1SvImJ_G0035573.1 mouse_genomes_project X 8419419 8719327 - Cask protein_coding retained_intron MGP_129S1SvImJ_T0095704.1 MGP_129S1SvImJ_G0035573.1 mouse_genomes_project X 8435932 8541162 - MGP_129S1SvImJ_P0095704 Cask protein_coding protein_coding MGP_129S1SvImJ_T0095705.1 MGP_129S1SvImJ_G0035573.1 mouse_genomes_project X 8493186 8718837 - MGP_129S1SvImJ_P0095705 Cask protein_coding protein_coding MGP_129S1SvImJ_T0095709.1 MGP_129S1SvImJ_G0035573.1 mouse_genomes_project X 8580366 8724116 - Cask protein_coding processed_transcript MGP_129S1SvImJ_T0095710.1 MGP_129S1SvImJ_G0035573.1 mouse_genomes_project X 8718838 8719484 - Cask protein_coding processed_transcript MGP_129S1SvImJ_T0016626.1 MGP_129S1SvImJ_G0014715.1 mouse_genomes_project X 103570247 103570653 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016572.1 MGP_129S1SvImJ_G0014661.1 mouse_genomes_project X 98313233 98313756 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016817.1 MGP_129S1SvImJ_G0014906.1 mouse_genomes_project X 143385285 143386103 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098134.1 MGP_129S1SvImJ_G0036270.1 mouse_genomes_project X 165407281 165425769 - MGP_129S1SvImJ_P0098134 Tlr8 protein_coding protein_coding MGP_129S1SvImJ_T0098135.1 MGP_129S1SvImJ_G0036270.1 mouse_genomes_project X 165407317 165425271 - MGP_129S1SvImJ_P0098135 Tlr8 protein_coding protein_coding MGP_129S1SvImJ_T0098136.1 MGP_129S1SvImJ_G0036270.1 mouse_genomes_project X 165409404 165425782 - Tlr8 protein_coding processed_transcript MGP_129S1SvImJ_T0098137.1 MGP_129S1SvImJ_G0036270.1 mouse_genomes_project X 165410128 165425812 - MGP_129S1SvImJ_P0098137 Tlr8 protein_coding protein_coding MGP_129S1SvImJ_T0098138.1 MGP_129S1SvImJ_G0036270.1 mouse_genomes_project X 165420835 165425767 - Tlr8 protein_coding processed_transcript MGP_129S1SvImJ_T0016395.1 MGP_129S1SvImJ_G0014484.1 mouse_genomes_project X 62573611 62574135 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096021.1 MGP_129S1SvImJ_G0035687.1 mouse_genomes_project X 43241874 43270045 + MGP_129S1SvImJ_P0096021 Xpnpep2 protein_coding protein_coding MGP_129S1SvImJ_T0096022.1 MGP_129S1SvImJ_G0035687.1 mouse_genomes_project X 43242068 43267089 + MGP_129S1SvImJ_P0096022 Xpnpep2 protein_coding protein_coding MGP_129S1SvImJ_T0096023.1 MGP_129S1SvImJ_G0035687.1 mouse_genomes_project X 43242070 43245306 + Xpnpep2 protein_coding processed_transcript MGP_129S1SvImJ_T0096024.1 MGP_129S1SvImJ_G0035687.1 mouse_genomes_project X 43242078 43269734 + MGP_129S1SvImJ_P0096024 Xpnpep2 protein_coding protein_coding MGP_129S1SvImJ_T0096025.1 MGP_129S1SvImJ_G0035687.1 mouse_genomes_project X 43260819 43264225 + Xpnpep2 protein_coding processed_transcript MGP_129S1SvImJ_T0016537.1 MGP_129S1SvImJ_G0014626.1 mouse_genomes_project X 91098603 91100221 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097942.1 MGP_129S1SvImJ_G0036225.1 mouse_genomes_project X 157310097 157397621 + MGP_129S1SvImJ_P0097942 Map7d2 protein_coding protein_coding MGP_129S1SvImJ_T0097943.1 MGP_129S1SvImJ_G0036225.1 mouse_genomes_project X 157342276 157387133 + MGP_129S1SvImJ_P0097943 Map7d2 protein_coding protein_coding MGP_129S1SvImJ_T0097944.1 MGP_129S1SvImJ_G0036225.1 mouse_genomes_project X 157356926 157383394 + MGP_129S1SvImJ_P0097944 Map7d2 protein_coding protein_coding MGP_129S1SvImJ_T0097945.1 MGP_129S1SvImJ_G0036225.1 mouse_genomes_project X 157356938 157368842 + MGP_129S1SvImJ_P0097945 Map7d2 protein_coding protein_coding MGP_129S1SvImJ_T0095549.1 MGP_129S1SvImJ_G0035529.1 mouse_genomes_project X 2520651 2525408 - MGP_129S1SvImJ_P0095549 Pqbp1 protein_coding protein_coding MGP_129S1SvImJ_T0095550.1 MGP_129S1SvImJ_G0035529.1 mouse_genomes_project X 2520715 2525118 - MGP_129S1SvImJ_P0095550 Pqbp1 protein_coding protein_coding MGP_129S1SvImJ_T0095551.1 MGP_129S1SvImJ_G0035529.1 mouse_genomes_project X 2520843 2525338 - MGP_129S1SvImJ_P0095551 Pqbp1 protein_coding protein_coding MGP_129S1SvImJ_T0095552.1 MGP_129S1SvImJ_G0035529.1 mouse_genomes_project X 2520926 2525139 - MGP_129S1SvImJ_P0095552 Pqbp1 protein_coding protein_coding MGP_129S1SvImJ_T0095553.1 MGP_129S1SvImJ_G0035529.1 mouse_genomes_project X 2522013 2525035 - MGP_129S1SvImJ_P0095553 Pqbp1 protein_coding protein_coding MGP_129S1SvImJ_T0097863.1 MGP_129S1SvImJ_G0036197.1 mouse_genomes_project X 151520177 151531477 - MGP_129S1SvImJ_P0097863 Kctd12b protein_coding protein_coding MGP_129S1SvImJ_T0097864.1 MGP_129S1SvImJ_G0036197.1 mouse_genomes_project X 151520177 151531286 - MGP_129S1SvImJ_P0097864 Kctd12b protein_coding protein_coding MGP_129S1SvImJ_T0096134.1 MGP_129S1SvImJ_G0035725.1 mouse_genomes_project X 48847873 48868803 - MGP_129S1SvImJ_P0096134 Gm14597 protein_coding protein_coding MGP_129S1SvImJ_T0096135.1 MGP_129S1SvImJ_G0035725.1 mouse_genomes_project X 48847873 48851429 - MGP_129S1SvImJ_P0096135 Gm14597 protein_coding protein_coding MGP_129S1SvImJ_T0096662.1 MGP_129S1SvImJ_G0035851.1 mouse_genomes_project X 70433860 70668607 - MGP_129S1SvImJ_P0096662 protein_coding protein_coding MGP_129S1SvImJ_T0095574.1 MGP_129S1SvImJ_G0035537.1 mouse_genomes_project X 2638869 2652891 - MGP_129S1SvImJ_P0095574 Glod5 protein_coding protein_coding MGP_129S1SvImJ_T0016312.1 MGP_129S1SvImJ_G0014401.1 mouse_genomes_project X 40484711 40485866 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016365.1 MGP_129S1SvImJ_G0014454.1 mouse_genomes_project X 56303056 56303512 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097014.1 MGP_129S1SvImJ_G0035956.1 mouse_genomes_project X 97763678 97767542 - MGP_129S1SvImJ_P0097014 Il2rg protein_coding protein_coding MGP_129S1SvImJ_T0097015.1 MGP_129S1SvImJ_G0035956.1 mouse_genomes_project X 97764238 97766721 - MGP_129S1SvImJ_P0097015 Il2rg protein_coding protein_coding MGP_129S1SvImJ_T0097016.1 MGP_129S1SvImJ_G0035956.1 mouse_genomes_project X 97765952 97767477 - Il2rg protein_coding retained_intron MGP_129S1SvImJ_T0097017.1 MGP_129S1SvImJ_G0035956.1 mouse_genomes_project X 97766482 97767445 - Il2rg protein_coding processed_transcript MGP_129S1SvImJ_T0009437.1 MGP_129S1SvImJ_G0007571.1 mouse_genomes_project X 150063145 150096065 - Kantr lincRNA lincRNA MGP_129S1SvImJ_T0009438.1 MGP_129S1SvImJ_G0007571.1 mouse_genomes_project X 150063297 150096065 - Kantr lincRNA lincRNA MGP_129S1SvImJ_T0009439.1 MGP_129S1SvImJ_G0007571.1 mouse_genomes_project X 150063297 150096065 - Kantr lincRNA lincRNA MGP_129S1SvImJ_T0009440.1 MGP_129S1SvImJ_G0007571.1 mouse_genomes_project X 150063374 150096033 - Kantr lincRNA lincRNA MGP_129S1SvImJ_T0009441.1 MGP_129S1SvImJ_G0007571.1 mouse_genomes_project X 150083854 150086594 - Kantr lincRNA lincRNA MGP_129S1SvImJ_T0009442.1 MGP_129S1SvImJ_G0007571.1 mouse_genomes_project X 150083950 150096040 - Kantr lincRNA lincRNA MGP_129S1SvImJ_T0009443.1 MGP_129S1SvImJ_G0007571.1 mouse_genomes_project X 150088379 150096040 - Kantr lincRNA lincRNA MGP_129S1SvImJ_T0009390.1 MGP_129S1SvImJ_G0007540.1 mouse_genomes_project X 57925069 57938476 - lincRNA lincRNA MGP_129S1SvImJ_T0009391.1 MGP_129S1SvImJ_G0007540.1 mouse_genomes_project X 57925069 57930478 - lincRNA lincRNA MGP_129S1SvImJ_T0098686.1 MGP_129S1SvImJ_G0036771.1 mouse_genomes_project X 99391539 99391640 + Gm26152 rRNA rRNA MGP_129S1SvImJ_T0098059.1 MGP_129S1SvImJ_G0036249.1 mouse_genomes_project X 162052964 162106246 - MGP_129S1SvImJ_P0098059 Car5b protein_coding protein_coding MGP_129S1SvImJ_T0098060.1 MGP_129S1SvImJ_G0036249.1 mouse_genomes_project X 162089692 162106230 - Car5b protein_coding retained_intron MGP_129S1SvImJ_T0102847.1 MGP_129S1SvImJ_G0040679.1 mouse_genomes_project X 33030278 33030492 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0016920.1 MGP_129S1SvImJ_G0015009.1 mouse_genomes_project X 165615105 165615648 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100247.1 MGP_129S1SvImJ_G0038314.1 mouse_genomes_project X 53699135 53699242 - Gm25851 snRNA snRNA MGP_129S1SvImJ_T0095632.1 MGP_129S1SvImJ_G0035555.1 mouse_genomes_project X 3993462 4042158 + MGP_129S1SvImJ_P0095632 Xk protein_coding protein_coding MGP_129S1SvImJ_T0016583.1 MGP_129S1SvImJ_G0014672.1 mouse_genomes_project X 99600936 99601694 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096699.1 MGP_129S1SvImJ_G0035858.1 mouse_genomes_project X 71248959 71260681 - MGP_129S1SvImJ_P0096699 Cmc4 protein_coding protein_coding MGP_129S1SvImJ_T0096700.1 MGP_129S1SvImJ_G0035858.1 mouse_genomes_project X 71249139 71260700 - MGP_129S1SvImJ_P0096700 Cmc4 protein_coding protein_coding MGP_129S1SvImJ_T0096701.1 MGP_129S1SvImJ_G0035858.1 mouse_genomes_project X 71249183 71254018 - MGP_129S1SvImJ_P0096701 Cmc4 protein_coding protein_coding MGP_129S1SvImJ_T0096907.1 MGP_129S1SvImJ_G0035927.1 mouse_genomes_project X 93112622 93115698 + Gpr165 protein_coding retained_intron MGP_129S1SvImJ_T0096908.1 MGP_129S1SvImJ_G0035927.1 mouse_genomes_project X 93112673 93121163 + MGP_129S1SvImJ_P0096908 Gpr165 protein_coding protein_coding MGP_129S1SvImJ_T0096909.1 MGP_129S1SvImJ_G0035927.1 mouse_genomes_project X 93112694 93114963 + Gpr165 protein_coding retained_intron MGP_129S1SvImJ_T0096910.1 MGP_129S1SvImJ_G0035927.1 mouse_genomes_project X 93113374 93121057 + Gpr165 protein_coding retained_intron MGP_129S1SvImJ_T0016691.1 MGP_129S1SvImJ_G0014780.1 mouse_genomes_project X 116985364 116986220 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097865.1 MGP_129S1SvImJ_G0036198.1 mouse_genomes_project X 151558232 151576818 + MGP_129S1SvImJ_P0097865 2210013O21Rik protein_coding protein_coding MGP_129S1SvImJ_T0097866.1 MGP_129S1SvImJ_G0036198.1 mouse_genomes_project X 151558252 151577474 + MGP_129S1SvImJ_P0097866 2210013O21Rik protein_coding protein_coding MGP_129S1SvImJ_T0097867.1 MGP_129S1SvImJ_G0036198.1 mouse_genomes_project X 151558269 151563831 + MGP_129S1SvImJ_P0097867 2210013O21Rik protein_coding protein_coding MGP_129S1SvImJ_T0097868.1 MGP_129S1SvImJ_G0036198.1 mouse_genomes_project X 151558581 151576676 + 2210013O21Rik protein_coding processed_transcript MGP_129S1SvImJ_T0097692.1 MGP_129S1SvImJ_G0036166.1 mouse_genomes_project X 145086290 145129157 - MGP_129S1SvImJ_P0097692 Lrch2 protein_coding protein_coding MGP_129S1SvImJ_T0097693.1 MGP_129S1SvImJ_G0036166.1 mouse_genomes_project X 145086295 145173023 - MGP_129S1SvImJ_P0097693 Lrch2 protein_coding protein_coding MGP_129S1SvImJ_T0097694.1 MGP_129S1SvImJ_G0036166.1 mouse_genomes_project X 145086302 145113944 - Lrch2 protein_coding retained_intron MGP_129S1SvImJ_T0097695.1 MGP_129S1SvImJ_G0036166.1 mouse_genomes_project X 145086302 145172992 - MGP_129S1SvImJ_P0097695 Lrch2 protein_coding protein_coding MGP_129S1SvImJ_T0097696.1 MGP_129S1SvImJ_G0036166.1 mouse_genomes_project X 145089012 145136058 - MGP_129S1SvImJ_P0097696 Lrch2 protein_coding protein_coding MGP_129S1SvImJ_T0097697.1 MGP_129S1SvImJ_G0036166.1 mouse_genomes_project X 145089156 145332061 - MGP_129S1SvImJ_P0097697 Lrch2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0097698.1 MGP_129S1SvImJ_G0036166.1 mouse_genomes_project X 145100458 145119249 - Lrch2 protein_coding processed_transcript MGP_129S1SvImJ_T0016773.1 MGP_129S1SvImJ_G0014862.1 mouse_genomes_project X 137414561 137416043 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101538.1 MGP_129S1SvImJ_G0039605.1 mouse_genomes_project X 123892541 123892664 + Gm23586 snoRNA snoRNA MGP_129S1SvImJ_T0016508.1 MGP_129S1SvImJ_G0014597.1 mouse_genomes_project X 87534319 87537196 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016912.1 MGP_129S1SvImJ_G0015001.1 mouse_genomes_project X 163819236 163819615 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102884.1 MGP_129S1SvImJ_G0040716.1 mouse_genomes_project X 152077744 152080014 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0016769.1 MGP_129S1SvImJ_G0014858.1 mouse_genomes_project X 136733352 136733993 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096958.1 MGP_129S1SvImJ_G0035939.1 mouse_genomes_project X 96851932 96861979 - MGP_129S1SvImJ_P0096958 Awat2 protein_coding protein_coding MGP_129S1SvImJ_T0016686.1 MGP_129S1SvImJ_G0014775.1 mouse_genomes_project X 114965553 114965904 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097550.1 MGP_129S1SvImJ_G0036122.1 mouse_genomes_project X 136826620 136831110 + MGP_129S1SvImJ_P0097550 Trap1a protein_coding protein_coding MGP_129S1SvImJ_T0101991.1 MGP_129S1SvImJ_G0039856.1 mouse_genomes_project X 148551055 148584482 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101992.1 MGP_129S1SvImJ_G0039856.1 mouse_genomes_project X 148577576 148579800 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101993.1 MGP_129S1SvImJ_G0039856.1 mouse_genomes_project X 148581189 148584595 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0016614.1 MGP_129S1SvImJ_G0014703.1 mouse_genomes_project X 102268910 102269516 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101514.1 MGP_129S1SvImJ_G0039581.1 mouse_genomes_project X 64150674 64150800 + Gm22332 snoRNA snoRNA MGP_129S1SvImJ_T0095674.1 MGP_129S1SvImJ_G0035567.1 mouse_genomes_project X 7404112 7412893 + Atp6ap2 protein_coding retained_intron MGP_129S1SvImJ_T0095675.1 MGP_129S1SvImJ_G0035567.1 mouse_genomes_project X 7404112 7437412 + MGP_129S1SvImJ_P0095675 Atp6ap2 protein_coding protein_coding MGP_129S1SvImJ_T0016825.1 MGP_129S1SvImJ_G0014914.1 mouse_genomes_project X 144245905 144246382 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098101.1 MGP_129S1SvImJ_G0036261.1 mouse_genomes_project X 163121410 163122469 - MGP_129S1SvImJ_P0098101 Gm17604 protein_coding protein_coding MGP_129S1SvImJ_T0016434.1 MGP_129S1SvImJ_G0014523.1 mouse_genomes_project X 71109891 71111820 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102885.1 MGP_129S1SvImJ_G0040717.1 mouse_genomes_project X 152179391 152183024 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0097208.1 MGP_129S1SvImJ_G0036011.1 mouse_genomes_project X 103912671 103930339 + MGP_129S1SvImJ_P0097208 P2ry10 protein_coding protein_coding MGP_129S1SvImJ_T0097209.1 MGP_129S1SvImJ_G0036011.1 mouse_genomes_project X 103913413 103930343 + MGP_129S1SvImJ_P0097209 P2ry10 protein_coding protein_coding MGP_129S1SvImJ_T0097210.1 MGP_129S1SvImJ_G0036011.1 mouse_genomes_project X 103913457 103930343 + MGP_129S1SvImJ_P0097210 P2ry10 protein_coding protein_coding MGP_129S1SvImJ_T0097328.1 MGP_129S1SvImJ_G0036054.1 mouse_genomes_project X 130727744 130836943 - MGP_129S1SvImJ_P0097328 Pcdh19 protein_coding protein_coding MGP_129S1SvImJ_T0097329.1 MGP_129S1SvImJ_G0036054.1 mouse_genomes_project X 130727759 130835221 - MGP_129S1SvImJ_P0097329 Pcdh19 protein_coding protein_coding MGP_129S1SvImJ_T0097330.1 MGP_129S1SvImJ_G0036054.1 mouse_genomes_project X 130727763 130833850 - MGP_129S1SvImJ_P0097330 Pcdh19 protein_coding protein_coding MGP_129S1SvImJ_T0097331.1 MGP_129S1SvImJ_G0036054.1 mouse_genomes_project X 130727764 130732896 - MGP_129S1SvImJ_P0097331 Pcdh19 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097332.1 MGP_129S1SvImJ_G0036054.1 mouse_genomes_project X 130829318 130832948 - Pcdh19 protein_coding processed_transcript MGP_129S1SvImJ_T0011142.1 MGP_129S1SvImJ_G0009258.1 mouse_genomes_project X 2425792 2425913 + Mir1198 miRNA miRNA MGP_129S1SvImJ_T0095706.1 MGP_129S1SvImJ_G0035574.1 mouse_genomes_project X 8498995 8507691 + MGP_129S1SvImJ_P0095706 Gpr34 protein_coding protein_coding MGP_129S1SvImJ_T0095707.1 MGP_129S1SvImJ_G0035574.1 mouse_genomes_project X 8499675 8507693 + MGP_129S1SvImJ_P0095707 Gpr34 protein_coding protein_coding MGP_129S1SvImJ_T0016582.1 MGP_129S1SvImJ_G0014671.1 mouse_genomes_project X 99250129 99250723 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009406.1 MGP_129S1SvImJ_G0007554.1 mouse_genomes_project X 100105214 100111492 - Xist lincRNA lincRNA MGP_129S1SvImJ_T0009407.1 MGP_129S1SvImJ_G0007554.1 mouse_genomes_project X 100105330 100129148 - Xist lincRNA lincRNA MGP_129S1SvImJ_T0009408.1 MGP_129S1SvImJ_G0007554.1 mouse_genomes_project X 100113638 100114590 - Xist lincRNA lincRNA MGP_129S1SvImJ_T0097835.1 MGP_129S1SvImJ_G0036185.1 mouse_genomes_project X 150103016 150108590 - Tspyl2 protein_coding retained_intron MGP_129S1SvImJ_T0097836.1 MGP_129S1SvImJ_G0036185.1 mouse_genomes_project X 150103016 150108590 - Tspyl2 protein_coding retained_intron MGP_129S1SvImJ_T0097837.1 MGP_129S1SvImJ_G0036185.1 mouse_genomes_project X 150103019 150108590 - MGP_129S1SvImJ_P0097837 Tspyl2 protein_coding protein_coding MGP_129S1SvImJ_T0097838.1 MGP_129S1SvImJ_G0036185.1 mouse_genomes_project X 150105465 150108009 - MGP_129S1SvImJ_P0097838 Tspyl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097839.1 MGP_129S1SvImJ_G0036185.1 mouse_genomes_project X 150106429 150107966 - Tspyl2 protein_coding retained_intron MGP_129S1SvImJ_T0098679.1 MGP_129S1SvImJ_G0036764.1 mouse_genomes_project X 16634671 16634750 + Gm25553 rRNA rRNA MGP_129S1SvImJ_T0096312.1 MGP_129S1SvImJ_G0035786.1 mouse_genomes_project X 67600817 67618071 + MGP_129S1SvImJ_P0096312 Gm1141 protein_coding protein_coding MGP_129S1SvImJ_T0096313.1 MGP_129S1SvImJ_G0035786.1 mouse_genomes_project X 67606552 67614126 + MGP_129S1SvImJ_P0096313 Gm1141 protein_coding protein_coding MGP_129S1SvImJ_T0011182.1 MGP_129S1SvImJ_G0009298.1 mouse_genomes_project X 62366305 62366383 - Mir883b miRNA miRNA MGP_129S1SvImJ_T0095560.1 MGP_129S1SvImJ_G0035534.1 mouse_genomes_project X 2550740 2555073 - MGP_129S1SvImJ_P0095560 Eras protein_coding protein_coding MGP_129S1SvImJ_T0016708.1 MGP_129S1SvImJ_G0014797.1 mouse_genomes_project X 119354569 119354872 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016709.1 MGP_129S1SvImJ_G0014798.1 mouse_genomes_project X 119681433 119682162 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100297.1 MGP_129S1SvImJ_G0038364.1 mouse_genomes_project X 161189249 161189356 - Gm22746 snRNA snRNA MGP_129S1SvImJ_T0016600.1 MGP_129S1SvImJ_G0014689.1 mouse_genomes_project X 100316615 100317788 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005603.1 MGP_129S1SvImJ_G0004724.1 mouse_genomes_project X 47786170 47831000 + A630012P03Rik antisense antisense MGP_129S1SvImJ_T0005604.1 MGP_129S1SvImJ_G0004724.1 mouse_genomes_project X 47786170 47831000 + A630012P03Rik antisense antisense MGP_129S1SvImJ_T0096897.1 MGP_129S1SvImJ_G0035925.1 mouse_genomes_project X 92692842 92848478 - MGP_129S1SvImJ_P0096897 Hsf3 protein_coding protein_coding MGP_129S1SvImJ_T0096898.1 MGP_129S1SvImJ_G0035925.1 mouse_genomes_project X 92693531 92740388 - MGP_129S1SvImJ_P0096898 Hsf3 protein_coding protein_coding MGP_129S1SvImJ_T0096899.1 MGP_129S1SvImJ_G0035925.1 mouse_genomes_project X 92694029 92848467 - MGP_129S1SvImJ_P0096899 Hsf3 protein_coding protein_coding MGP_129S1SvImJ_T0096900.1 MGP_129S1SvImJ_G0035925.1 mouse_genomes_project X 92694187 92754323 - MGP_129S1SvImJ_P0096900 Hsf3 protein_coding protein_coding MGP_129S1SvImJ_T0096901.1 MGP_129S1SvImJ_G0035925.1 mouse_genomes_project X 92707296 92724221 - Hsf3 protein_coding retained_intron MGP_129S1SvImJ_T0101802.1 MGP_129S1SvImJ_G0039768.1 mouse_genomes_project X 85238590 85239033 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101803.1 MGP_129S1SvImJ_G0039768.1 mouse_genomes_project X 85238643 85238850 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0016830.1 MGP_129S1SvImJ_G0014919.1 mouse_genomes_project X 148150108 148150387 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016398.1 MGP_129S1SvImJ_G0014487.1 mouse_genomes_project X 63267801 63268621 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097612.1 MGP_129S1SvImJ_G0036142.1 mouse_genomes_project X 138633701 138957289 - MGP_129S1SvImJ_P0097612 Col4a6 protein_coding protein_coding MGP_129S1SvImJ_T0097613.1 MGP_129S1SvImJ_G0036142.1 mouse_genomes_project X 138655695 138677200 - Col4a6 protein_coding processed_transcript MGP_129S1SvImJ_T0097614.1 MGP_129S1SvImJ_G0036142.1 mouse_genomes_project X 138659323 138662208 - Col4a6 protein_coding retained_intron MGP_129S1SvImJ_T0096624.1 MGP_129S1SvImJ_G0035845.1 mouse_genomes_project X 70175432 70179456 - MGP_129S1SvImJ_P0096624 Slc10a3 protein_coding protein_coding MGP_129S1SvImJ_T0096625.1 MGP_129S1SvImJ_G0035845.1 mouse_genomes_project X 70175434 70177224 - MGP_129S1SvImJ_P0096625 Slc10a3 protein_coding protein_coding MGP_129S1SvImJ_T0096626.1 MGP_129S1SvImJ_G0035845.1 mouse_genomes_project X 70175434 70179515 - MGP_129S1SvImJ_P0096626 Slc10a3 protein_coding protein_coding MGP_129S1SvImJ_T0096627.1 MGP_129S1SvImJ_G0035845.1 mouse_genomes_project X 70175434 70179559 - MGP_129S1SvImJ_P0096627 Slc10a3 protein_coding protein_coding MGP_129S1SvImJ_T0100248.1 MGP_129S1SvImJ_G0038315.1 mouse_genomes_project X 54544001 54544095 + Gm26487 snRNA snRNA MGP_129S1SvImJ_T0016873.1 MGP_129S1SvImJ_G0014962.1 mouse_genomes_project X 155539447 155540043 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097365.1 MGP_129S1SvImJ_G0036065.1 mouse_genomes_project X 131467471 131479073 + MGP_129S1SvImJ_P0097365 Tmem35a protein_coding protein_coding MGP_129S1SvImJ_T0096344.1 MGP_129S1SvImJ_G0035800.1 mouse_genomes_project X 68829615 69049991 + MGP_129S1SvImJ_P0096344 protein_coding protein_coding MGP_129S1SvImJ_T0097619.1 MGP_129S1SvImJ_G0036144.1 mouse_genomes_project X 139208715 139223860 - MGP_129S1SvImJ_P0097619 Irs4 protein_coding protein_coding MGP_129S1SvImJ_T0095662.1 MGP_129S1SvImJ_G0035565.1 mouse_genomes_project X 5467404 5468840 + Mid1ip1 protein_coding processed_transcript MGP_129S1SvImJ_T0095663.1 MGP_129S1SvImJ_G0035565.1 mouse_genomes_project X 5467410 5470776 + MGP_129S1SvImJ_P0095663 Mid1ip1 protein_coding protein_coding MGP_129S1SvImJ_T0095664.1 MGP_129S1SvImJ_G0035565.1 mouse_genomes_project X 5469781 5472082 + MGP_129S1SvImJ_P0095664 Mid1ip1 protein_coding protein_coding MGP_129S1SvImJ_T0095665.1 MGP_129S1SvImJ_G0035565.1 mouse_genomes_project X 5469781 5472082 + MGP_129S1SvImJ_P0095665 Mid1ip1 protein_coding protein_coding MGP_129S1SvImJ_T0095666.1 MGP_129S1SvImJ_G0035565.1 mouse_genomes_project X 5469859 5470776 + MGP_129S1SvImJ_P0095666 Mid1ip1 protein_coding protein_coding MGP_129S1SvImJ_T0102878.1 MGP_129S1SvImJ_G0040710.1 mouse_genomes_project X 145355716 145357631 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0016185.1 MGP_129S1SvImJ_G0014274.1 mouse_genomes_project X 680337 680847 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097635.1 MGP_129S1SvImJ_G0036152.1 mouse_genomes_project X 140382147 140496298 - MGP_129S1SvImJ_P0097635 protein_coding protein_coding MGP_129S1SvImJ_T0095748.1 MGP_129S1SvImJ_G0035591.1 mouse_genomes_project X 15444107 15456469 + MGP_129S1SvImJ_P0095748 Rgn protein_coding protein_coding MGP_129S1SvImJ_T0016215.1 MGP_129S1SvImJ_G0014304.1 mouse_genomes_project X 6456054 6456177 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016794.1 MGP_129S1SvImJ_G0014883.1 mouse_genomes_project X 139713788 139714046 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097018.1 MGP_129S1SvImJ_G0035957.1 mouse_genomes_project X 97774275 97797711 + MGP_129S1SvImJ_P0097018 Med12 protein_coding protein_coding MGP_129S1SvImJ_T0097019.1 MGP_129S1SvImJ_G0035957.1 mouse_genomes_project X 97774474 97797711 + MGP_129S1SvImJ_P0097019 Med12 protein_coding protein_coding MGP_129S1SvImJ_T0097020.1 MGP_129S1SvImJ_G0035957.1 mouse_genomes_project X 97774505 97797711 + MGP_129S1SvImJ_P0097020 Med12 protein_coding protein_coding MGP_129S1SvImJ_T0097021.1 MGP_129S1SvImJ_G0035957.1 mouse_genomes_project X 97774505 97797711 + MGP_129S1SvImJ_P0097021 Med12 protein_coding protein_coding MGP_129S1SvImJ_T0097022.1 MGP_129S1SvImJ_G0035957.1 mouse_genomes_project X 97782941 97784403 + Med12 protein_coding retained_intron MGP_129S1SvImJ_T0097023.1 MGP_129S1SvImJ_G0035957.1 mouse_genomes_project X 97783431 97784174 + Med12 protein_coding processed_transcript MGP_129S1SvImJ_T0097024.1 MGP_129S1SvImJ_G0035957.1 mouse_genomes_project X 97786269 97797711 + Med12 protein_coding retained_intron MGP_129S1SvImJ_T0097025.1 MGP_129S1SvImJ_G0035957.1 mouse_genomes_project X 97793379 97796313 + Med12 protein_coding processed_transcript MGP_129S1SvImJ_T0097026.1 MGP_129S1SvImJ_G0035957.1 mouse_genomes_project X 97796814 97797633 + Med12 protein_coding processed_transcript MGP_129S1SvImJ_T0016509.1 MGP_129S1SvImJ_G0014598.1 mouse_genomes_project X 87552444 87553468 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016204.1 MGP_129S1SvImJ_G0014293.1 mouse_genomes_project X 3622077 3622878 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097557.1 MGP_129S1SvImJ_G0036125.1 mouse_genomes_project X 137189624 137261733 + MGP_129S1SvImJ_P0097557 Tbc1d8b protein_coding protein_coding MGP_129S1SvImJ_T0097559.1 MGP_129S1SvImJ_G0036125.1 mouse_genomes_project X 137243191 137253521 + Tbc1d8b protein_coding processed_transcript MGP_129S1SvImJ_T0096277.1 MGP_129S1SvImJ_G0035781.1 mouse_genomes_project X 66846740 66952655 + MGP_129S1SvImJ_P0096277 Mtm1 protein_coding protein_coding MGP_129S1SvImJ_T0096278.1 MGP_129S1SvImJ_G0035781.1 mouse_genomes_project X 66851357 66952655 + MGP_129S1SvImJ_P0096278 Mtm1 protein_coding protein_coding MGP_129S1SvImJ_T0096279.1 MGP_129S1SvImJ_G0035781.1 mouse_genomes_project X 66851357 66952655 + MGP_129S1SvImJ_P0096279 Mtm1 protein_coding protein_coding MGP_129S1SvImJ_T0096280.1 MGP_129S1SvImJ_G0035781.1 mouse_genomes_project X 66851357 66898965 + MGP_129S1SvImJ_P0096280 Mtm1 protein_coding protein_coding MGP_129S1SvImJ_T0096281.1 MGP_129S1SvImJ_G0035781.1 mouse_genomes_project X 66851379 66952648 + MGP_129S1SvImJ_P0096281 Mtm1 protein_coding protein_coding MGP_129S1SvImJ_T0096282.1 MGP_129S1SvImJ_G0035781.1 mouse_genomes_project X 66851382 66936410 + Mtm1 protein_coding retained_intron MGP_129S1SvImJ_T0096283.1 MGP_129S1SvImJ_G0035781.1 mouse_genomes_project X 66851387 66935131 + Mtm1 protein_coding retained_intron MGP_129S1SvImJ_T0096284.1 MGP_129S1SvImJ_G0035781.1 mouse_genomes_project X 66851390 66952625 + MGP_129S1SvImJ_P0096284 Mtm1 protein_coding protein_coding MGP_129S1SvImJ_T0096285.1 MGP_129S1SvImJ_G0035781.1 mouse_genomes_project X 66851410 66947673 + Mtm1 protein_coding retained_intron MGP_129S1SvImJ_T0096286.1 MGP_129S1SvImJ_G0035781.1 mouse_genomes_project X 66851433 66952625 + MGP_129S1SvImJ_P0096286 Mtm1 protein_coding protein_coding MGP_129S1SvImJ_T0096287.1 MGP_129S1SvImJ_G0035781.1 mouse_genomes_project X 66851436 66873041 + Mtm1 protein_coding retained_intron MGP_129S1SvImJ_T0096288.1 MGP_129S1SvImJ_G0035781.1 mouse_genomes_project X 66851436 66894594 + Mtm1 protein_coding retained_intron MGP_129S1SvImJ_T0096289.1 MGP_129S1SvImJ_G0035781.1 mouse_genomes_project X 66938917 66953051 + Mtm1 protein_coding retained_intron MGP_129S1SvImJ_T0097876.1 MGP_129S1SvImJ_G0036204.1 mouse_genomes_project X 152494169 152502016 + MGP_129S1SvImJ_P0097876 Samt2 protein_coding protein_coding MGP_129S1SvImJ_T0100268.1 MGP_129S1SvImJ_G0038335.1 mouse_genomes_project X 102649979 102650091 + Gm23656 snRNA snRNA MGP_129S1SvImJ_T0011220.1 MGP_129S1SvImJ_G0009336.1 mouse_genomes_project X 100773117 100773208 + Gm24993 miRNA miRNA MGP_129S1SvImJ_T0016699.1 MGP_129S1SvImJ_G0014788.1 mouse_genomes_project X 118074429 118075404 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016560.1 MGP_129S1SvImJ_G0014649.1 mouse_genomes_project X 95494793 95495795 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009396.1 MGP_129S1SvImJ_G0007545.1 mouse_genomes_project X 76989818 76992492 - Gm26775 lincRNA lincRNA MGP_129S1SvImJ_T0011801.1 MGP_129S1SvImJ_G0009917.1 mouse_genomes_project X 150721843 150722144 - Gm26035 misc_RNA misc_RNA MGP_129S1SvImJ_T0016385.1 MGP_129S1SvImJ_G0014474.1 mouse_genomes_project X 60278835 60279693 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097883.1 MGP_129S1SvImJ_G0036211.1 mouse_genomes_project X 153103850 153107157 - MGP_129S1SvImJ_P0097883 Sat1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097884.1 MGP_129S1SvImJ_G0036211.1 mouse_genomes_project X 153103850 153107157 - MGP_129S1SvImJ_P0097884 Sat1 protein_coding protein_coding MGP_129S1SvImJ_T0097885.1 MGP_129S1SvImJ_G0036211.1 mouse_genomes_project X 153104024 153107040 - Sat1 protein_coding retained_intron MGP_129S1SvImJ_T0097886.1 MGP_129S1SvImJ_G0036211.1 mouse_genomes_project X 153104024 153105612 - Sat1 protein_coding retained_intron MGP_129S1SvImJ_T0097887.1 MGP_129S1SvImJ_G0036211.1 mouse_genomes_project X 153104024 153104778 - Sat1 protein_coding retained_intron MGP_129S1SvImJ_T0097888.1 MGP_129S1SvImJ_G0036211.1 mouse_genomes_project X 153104033 153107053 - MGP_129S1SvImJ_P0097888 Sat1 protein_coding protein_coding MGP_129S1SvImJ_T0097889.1 MGP_129S1SvImJ_G0036211.1 mouse_genomes_project X 153106162 153107035 - Sat1 protein_coding retained_intron MGP_129S1SvImJ_T0016821.1 MGP_129S1SvImJ_G0014910.1 mouse_genomes_project X 143657322 143658406 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016534.1 MGP_129S1SvImJ_G0014623.1 mouse_genomes_project X 90982240 90982649 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096368.1 MGP_129S1SvImJ_G0035812.1 mouse_genomes_project X 69255781 69328281 + MGP_129S1SvImJ_P0096368 Atp2b3 protein_coding protein_coding MGP_129S1SvImJ_T0096369.1 MGP_129S1SvImJ_G0035812.1 mouse_genomes_project X 69255781 69315504 + MGP_129S1SvImJ_P0096369 Atp2b3 protein_coding protein_coding MGP_129S1SvImJ_T0096370.1 MGP_129S1SvImJ_G0035812.1 mouse_genomes_project X 69255781 69328281 + MGP_129S1SvImJ_P0096370 Atp2b3 protein_coding protein_coding MGP_129S1SvImJ_T0097027.1 MGP_129S1SvImJ_G0035958.1 mouse_genomes_project X 97799399 97825864 + MGP_129S1SvImJ_P0097027 Nlgn3 protein_coding protein_coding MGP_129S1SvImJ_T0097028.1 MGP_129S1SvImJ_G0035958.1 mouse_genomes_project X 97799410 97818925 + MGP_129S1SvImJ_P0097028 Nlgn3 protein_coding protein_coding MGP_129S1SvImJ_T0097029.1 MGP_129S1SvImJ_G0035958.1 mouse_genomes_project X 97799429 97826197 + MGP_129S1SvImJ_P0097029 Nlgn3 protein_coding protein_coding MGP_129S1SvImJ_T0097030.1 MGP_129S1SvImJ_G0035958.1 mouse_genomes_project X 97800709 97802310 + Nlgn3 protein_coding processed_transcript MGP_129S1SvImJ_T0097031.1 MGP_129S1SvImJ_G0035958.1 mouse_genomes_project X 97814644 97818401 + Nlgn3 protein_coding processed_transcript MGP_129S1SvImJ_T0016898.1 MGP_129S1SvImJ_G0014987.1 mouse_genomes_project X 160681455 160681910 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097271.1 MGP_129S1SvImJ_G0036031.1 mouse_genomes_project X 109076757 109140396 + MGP_129S1SvImJ_P0097271 Apool protein_coding protein_coding MGP_129S1SvImJ_T0097272.1 MGP_129S1SvImJ_G0036031.1 mouse_genomes_project X 109076771 109114844 + Apool protein_coding retained_intron MGP_129S1SvImJ_T0097273.1 MGP_129S1SvImJ_G0036031.1 mouse_genomes_project X 109076789 109140071 + MGP_129S1SvImJ_P0097273 Apool protein_coding protein_coding MGP_129S1SvImJ_T0097429.1 MGP_129S1SvImJ_G0036083.1 mouse_genomes_project X 132546887 132562249 + MGP_129S1SvImJ_P0097429 protein_coding protein_coding MGP_129S1SvImJ_T0100227.1 MGP_129S1SvImJ_G0038294.1 mouse_genomes_project X 10562754 10562861 - Gm25207 snRNA snRNA MGP_129S1SvImJ_T0095836.1 MGP_129S1SvImJ_G0035616.1 mouse_genomes_project X 31004907 31064054 + MGP_129S1SvImJ_P0095836 Il13ra1 protein_coding protein_coding MGP_129S1SvImJ_T0095633.1 MGP_129S1SvImJ_G0035556.1 mouse_genomes_project X 4146698 4180613 - MGP_129S1SvImJ_P0095633 Cybb protein_coding protein_coding MGP_129S1SvImJ_T0095634.1 MGP_129S1SvImJ_G0035556.1 mouse_genomes_project X 4158258 4180558 - MGP_129S1SvImJ_P0095634 Cybb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095635.1 MGP_129S1SvImJ_G0035556.1 mouse_genomes_project X 4160716 4162866 - Cybb protein_coding retained_intron MGP_129S1SvImJ_T0095636.1 MGP_129S1SvImJ_G0035556.1 mouse_genomes_project X 4168350 4201883 - MGP_129S1SvImJ_P0095636 Cybb protein_coding protein_coding MGP_129S1SvImJ_T0095637.1 MGP_129S1SvImJ_G0035556.1 mouse_genomes_project X 4176277 4180559 - Cybb protein_coding retained_intron MGP_129S1SvImJ_T0095530.1 MGP_129S1SvImJ_G0035526.1 mouse_genomes_project X 2461328 2461973 + Otud5 protein_coding processed_transcript MGP_129S1SvImJ_T0095531.1 MGP_129S1SvImJ_G0035526.1 mouse_genomes_project X 2461795 2497492 + MGP_129S1SvImJ_P0095531 Otud5 protein_coding protein_coding MGP_129S1SvImJ_T0095532.1 MGP_129S1SvImJ_G0035526.1 mouse_genomes_project X 2461820 2495726 + MGP_129S1SvImJ_P0095532 Otud5 protein_coding protein_coding MGP_129S1SvImJ_T0095533.1 MGP_129S1SvImJ_G0035526.1 mouse_genomes_project X 2462020 2496151 + MGP_129S1SvImJ_P0095533 Otud5 protein_coding protein_coding MGP_129S1SvImJ_T0095534.1 MGP_129S1SvImJ_G0035526.1 mouse_genomes_project X 2462046 2496156 + MGP_129S1SvImJ_P0095534 Otud5 protein_coding protein_coding MGP_129S1SvImJ_T0095535.1 MGP_129S1SvImJ_G0035526.1 mouse_genomes_project X 2462080 2497486 + MGP_129S1SvImJ_P0095535 Otud5 protein_coding protein_coding MGP_129S1SvImJ_T0095536.1 MGP_129S1SvImJ_G0035526.1 mouse_genomes_project X 2462569 2496150 + Otud5 protein_coding retained_intron MGP_129S1SvImJ_T0095537.1 MGP_129S1SvImJ_G0035526.1 mouse_genomes_project X 2462570 2488831 + Otud5 protein_coding retained_intron MGP_129S1SvImJ_T0095538.1 MGP_129S1SvImJ_G0035526.1 mouse_genomes_project X 2476204 2488431 + Otud5 protein_coding retained_intron MGP_129S1SvImJ_T0102842.1 MGP_129S1SvImJ_G0040674.1 mouse_genomes_project X 4004018 4004282 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0095922.1 MGP_129S1SvImJ_G0035663.1 mouse_genomes_project X 33142823 33198516 - MGP_129S1SvImJ_P0095922 Tmem255a protein_coding protein_coding MGP_129S1SvImJ_T0095923.1 MGP_129S1SvImJ_G0035663.1 mouse_genomes_project X 33143556 33198526 - Tmem255a protein_coding retained_intron MGP_129S1SvImJ_T0095924.1 MGP_129S1SvImJ_G0035663.1 mouse_genomes_project X 33143556 33198526 - MGP_129S1SvImJ_P0095924 Tmem255a protein_coding protein_coding MGP_129S1SvImJ_T0095925.1 MGP_129S1SvImJ_G0035663.1 mouse_genomes_project X 33143556 33198526 - MGP_129S1SvImJ_P0095925 Tmem255a protein_coding protein_coding MGP_129S1SvImJ_T0095926.1 MGP_129S1SvImJ_G0035663.1 mouse_genomes_project X 33161456 33198488 - Tmem255a protein_coding processed_transcript MGP_129S1SvImJ_T0096553.1 MGP_129S1SvImJ_G0035837.1 mouse_genomes_project X 70068034 70079475 - MGP_129S1SvImJ_P0096553 Dnase1l1 protein_coding protein_coding MGP_129S1SvImJ_T0096554.1 MGP_129S1SvImJ_G0035837.1 mouse_genomes_project X 70068035 70080076 - MGP_129S1SvImJ_P0096554 Dnase1l1 protein_coding protein_coding MGP_129S1SvImJ_T0096555.1 MGP_129S1SvImJ_G0035837.1 mouse_genomes_project X 70068136 70079337 - MGP_129S1SvImJ_P0096555 Dnase1l1 protein_coding protein_coding MGP_129S1SvImJ_T0096556.1 MGP_129S1SvImJ_G0035837.1 mouse_genomes_project X 70068790 70079414 - MGP_129S1SvImJ_P0096556 Dnase1l1 protein_coding protein_coding MGP_129S1SvImJ_T0096557.1 MGP_129S1SvImJ_G0035837.1 mouse_genomes_project X 70069185 70072860 - Dnase1l1 protein_coding retained_intron MGP_129S1SvImJ_T0096558.1 MGP_129S1SvImJ_G0035837.1 mouse_genomes_project X 70072798 70079365 - Dnase1l1 protein_coding retained_intron MGP_129S1SvImJ_T0098161.1 MGP_129S1SvImJ_G0036276.1 mouse_genomes_project X 167396516 167407721 - MGP_129S1SvImJ_P0098161 Amelx protein_coding protein_coding MGP_129S1SvImJ_T0098162.1 MGP_129S1SvImJ_G0036276.1 mouse_genomes_project X 167400505 167407721 - Amelx protein_coding processed_transcript MGP_129S1SvImJ_T0098163.1 MGP_129S1SvImJ_G0036276.1 mouse_genomes_project X 167400505 167407721 - MGP_129S1SvImJ_P0098163 Amelx protein_coding protein_coding MGP_129S1SvImJ_T0098164.1 MGP_129S1SvImJ_G0036276.1 mouse_genomes_project X 167400505 167407721 - MGP_129S1SvImJ_P0098164 Amelx protein_coding protein_coding MGP_129S1SvImJ_T0098165.1 MGP_129S1SvImJ_G0036276.1 mouse_genomes_project X 167400505 167407721 - MGP_129S1SvImJ_P0098165 Amelx protein_coding protein_coding MGP_129S1SvImJ_T0097204.1 MGP_129S1SvImJ_G0036008.1 mouse_genomes_project X 103417078 103540603 + MGP_129S1SvImJ_P0097204 Gm5127 protein_coding protein_coding MGP_129S1SvImJ_T0097205.1 MGP_129S1SvImJ_G0036008.1 mouse_genomes_project X 103417078 103539908 + MGP_129S1SvImJ_P0097205 Gm5127 protein_coding protein_coding MGP_129S1SvImJ_T0016593.1 MGP_129S1SvImJ_G0014682.1 mouse_genomes_project X 99971545 99971969 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016533.1 MGP_129S1SvImJ_G0014622.1 mouse_genomes_project X 90970264 90970871 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096731.1 MGP_129S1SvImJ_G0035870.1 mouse_genomes_project X 73581599 73621962 - MGP_129S1SvImJ_P0096731 Prkx protein_coding protein_coding MGP_129S1SvImJ_T0096732.1 MGP_129S1SvImJ_G0035870.1 mouse_genomes_project X 73591643 73621654 - MGP_129S1SvImJ_P0096732 Prkx protein_coding protein_coding MGP_129S1SvImJ_T0016874.1 MGP_129S1SvImJ_G0014963.1 mouse_genomes_project X 155553584 155553918 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005613.1 MGP_129S1SvImJ_G0004732.1 mouse_genomes_project X 69144315 69156699 - Gm26726 antisense antisense MGP_129S1SvImJ_T0016190.1 MGP_129S1SvImJ_G0014279.1 mouse_genomes_project X 2299395 2299799 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095896.1 MGP_129S1SvImJ_G0035645.1 mouse_genomes_project X 32648369 32652628 - MGP_129S1SvImJ_P0095896 Rhox2b protein_coding protein_coding MGP_129S1SvImJ_T0016278.1 MGP_129S1SvImJ_G0014367.1 mouse_genomes_project X 33674707 33675218 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016772.1 MGP_129S1SvImJ_G0014861.1 mouse_genomes_project X 137308321 137308427 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098046.1 MGP_129S1SvImJ_G0036246.1 mouse_genomes_project X 161829291 161830482 - MGP_129S1SvImJ_P0098046 Rnf138rt1 protein_coding protein_coding MGP_129S1SvImJ_T0011145.1 MGP_129S1SvImJ_G0009261.1 mouse_genomes_project X 10585174 10585238 + Gm22464 miRNA miRNA MGP_129S1SvImJ_T0016386.1 MGP_129S1SvImJ_G0014475.1 mouse_genomes_project X 60375584 60376950 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097283.1 MGP_129S1SvImJ_G0036036.1 mouse_genomes_project X 109798547 109991991 - MGP_129S1SvImJ_P0097283 Chm protein_coding protein_coding MGP_129S1SvImJ_T0097284.1 MGP_129S1SvImJ_G0036036.1 mouse_genomes_project X 109801135 109805541 - Chm protein_coding processed_transcript MGP_129S1SvImJ_T0097285.1 MGP_129S1SvImJ_G0036036.1 mouse_genomes_project X 109820482 109949972 - Chm protein_coding processed_transcript MGP_129S1SvImJ_T0097286.1 MGP_129S1SvImJ_G0036036.1 mouse_genomes_project X 109879381 109949972 - Chm protein_coding processed_transcript MGP_129S1SvImJ_T0016539.1 MGP_129S1SvImJ_G0014628.1 mouse_genomes_project X 91203403 91204103 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097430.1 MGP_129S1SvImJ_G0036084.1 mouse_genomes_project X 132800116 132815049 + MGP_129S1SvImJ_P0097430 protein_coding protein_coding MGP_129S1SvImJ_T0016445.1 MGP_129S1SvImJ_G0014534.1 mouse_genomes_project X 73108467 73109520 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100234.1 MGP_129S1SvImJ_G0038301.1 mouse_genomes_project X 17749518 17749628 + Gm26131 snRNA snRNA MGP_129S1SvImJ_T0009447.1 MGP_129S1SvImJ_G0007575.1 mouse_genomes_project X 164756979 164760419 - Gm15226 lincRNA lincRNA MGP_129S1SvImJ_T0102868.1 MGP_129S1SvImJ_G0040700.1 mouse_genomes_project X 91968628 91969163 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0098675.1 MGP_129S1SvImJ_G0036760.1 mouse_genomes_project X 715217 715336 + n-R5s2 rRNA rRNA MGP_129S1SvImJ_T0096124.1 MGP_129S1SvImJ_G0035721.1 mouse_genomes_project X 48492431 48521131 - MGP_129S1SvImJ_P0096124 Fam122b protein_coding protein_coding MGP_129S1SvImJ_T0096125.1 MGP_129S1SvImJ_G0035721.1 mouse_genomes_project X 48492441 48520346 - MGP_129S1SvImJ_P0096125 Fam122b protein_coding protein_coding MGP_129S1SvImJ_T0096126.1 MGP_129S1SvImJ_G0035721.1 mouse_genomes_project X 48492762 48521124 - MGP_129S1SvImJ_P0096126 Fam122b protein_coding protein_coding MGP_129S1SvImJ_T0096127.1 MGP_129S1SvImJ_G0035721.1 mouse_genomes_project X 48493880 48521131 - Fam122b protein_coding processed_transcript MGP_129S1SvImJ_T0016713.1 MGP_129S1SvImJ_G0014802.1 mouse_genomes_project X 123945846 123946101 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016193.1 MGP_129S1SvImJ_G0014282.1 mouse_genomes_project X 2671319 2672187 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011167.1 MGP_129S1SvImJ_G0009283.1 mouse_genomes_project X 48293119 48293210 - Mir450-1 miRNA miRNA MGP_129S1SvImJ_T0016373.1 MGP_129S1SvImJ_G0014462.1 mouse_genomes_project X 57246103 57247169 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096817.1 MGP_129S1SvImJ_G0035904.1 mouse_genomes_project X 90024937 90116048 + MGP_129S1SvImJ_P0096817 Pcyt1b protein_coding protein_coding MGP_129S1SvImJ_T0096818.1 MGP_129S1SvImJ_G0035904.1 mouse_genomes_project X 90046012 90116048 + MGP_129S1SvImJ_P0096818 Pcyt1b protein_coding protein_coding MGP_129S1SvImJ_T0096819.1 MGP_129S1SvImJ_G0035904.1 mouse_genomes_project X 90097667 90100962 + Pcyt1b protein_coding processed_transcript MGP_129S1SvImJ_T0011203.1 MGP_129S1SvImJ_G0009319.1 mouse_genomes_project X 68688667 68688733 + Mir2137 miRNA miRNA MGP_129S1SvImJ_T0100270.1 MGP_129S1SvImJ_G0038337.1 mouse_genomes_project X 103482582 103482689 - Gm24491 snRNA snRNA MGP_129S1SvImJ_T0100291.1 MGP_129S1SvImJ_G0038358.1 mouse_genomes_project X 151405162 151405269 - Gm25793 snRNA snRNA MGP_129S1SvImJ_T0016642.1 MGP_129S1SvImJ_G0014731.1 mouse_genomes_project X 107383955 107385099 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011237.1 MGP_129S1SvImJ_G0009353.1 mouse_genomes_project X 144605333 144605438 + Gm22650 miRNA miRNA MGP_129S1SvImJ_T0005597.1 MGP_129S1SvImJ_G0004718.1 mouse_genomes_project X 5469864 5471102 - Gm14493 antisense antisense MGP_129S1SvImJ_T0098687.1 MGP_129S1SvImJ_G0036772.1 mouse_genomes_project X 99457716 99457817 - Gm24509 rRNA rRNA MGP_129S1SvImJ_T0095711.1 MGP_129S1SvImJ_G0035576.1 mouse_genomes_project X 9122349 9122795 + MGP_129S1SvImJ_P0095711 Gm14501 protein_coding protein_coding MGP_129S1SvImJ_T0095893.1 MGP_129S1SvImJ_G0035643.1 mouse_genomes_project X 32636622 32641598 - MGP_129S1SvImJ_P0095893 protein_coding protein_coding MGP_129S1SvImJ_T0016796.1 MGP_129S1SvImJ_G0014885.1 mouse_genomes_project X 139918292 139918506 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016203.1 MGP_129S1SvImJ_G0014292.1 mouse_genomes_project X 3601875 3602967 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095613.1 MGP_129S1SvImJ_G0035545.1 mouse_genomes_project X 2893664 2908391 - MGP_129S1SvImJ_P0095613 Ftsj1 protein_coding protein_coding MGP_129S1SvImJ_T0095614.1 MGP_129S1SvImJ_G0035545.1 mouse_genomes_project X 2895422 2908295 - MGP_129S1SvImJ_P0095614 Ftsj1 protein_coding protein_coding MGP_129S1SvImJ_T0095615.1 MGP_129S1SvImJ_G0035545.1 mouse_genomes_project X 2895422 2908380 - MGP_129S1SvImJ_P0095615 Ftsj1 protein_coding protein_coding MGP_129S1SvImJ_T0095616.1 MGP_129S1SvImJ_G0035545.1 mouse_genomes_project X 2900617 2908193 - Ftsj1 protein_coding retained_intron MGP_129S1SvImJ_T0095617.1 MGP_129S1SvImJ_G0035545.1 mouse_genomes_project X 2900914 2902346 - MGP_129S1SvImJ_P0095617 Ftsj1 protein_coding protein_coding MGP_129S1SvImJ_T0095618.1 MGP_129S1SvImJ_G0035545.1 mouse_genomes_project X 2900945 2901805 - Ftsj1 protein_coding processed_transcript MGP_129S1SvImJ_T0095619.1 MGP_129S1SvImJ_G0035545.1 mouse_genomes_project X 2904511 2908348 - Ftsj1 protein_coding retained_intron MGP_129S1SvImJ_T0016233.1 MGP_129S1SvImJ_G0014322.1 mouse_genomes_project X 9861136 9862013 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095631.1 MGP_129S1SvImJ_G0035554.1 mouse_genomes_project X 3969101 3975048 - MGP_129S1SvImJ_P0095631 Gm14862 protein_coding protein_coding MGP_129S1SvImJ_T0016760.1 MGP_129S1SvImJ_G0014849.1 mouse_genomes_project X 134542394 134542992 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016891.1 MGP_129S1SvImJ_G0014980.1 mouse_genomes_project X 158230218 158230700 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009454.1 MGP_129S1SvImJ_G0007580.1 mouse_genomes_project X 165329716 165336850 + Gm15228 lincRNA lincRNA MGP_129S1SvImJ_T0016764.1 MGP_129S1SvImJ_G0014853.1 mouse_genomes_project X 135064712 135068152 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016826.1 MGP_129S1SvImJ_G0014915.1 mouse_genomes_project X 144248542 144249478 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097713.1 MGP_129S1SvImJ_G0036169.1 mouse_genomes_project X 148275567 148299757 + MGP_129S1SvImJ_P0097713 Alas2 protein_coding protein_coding MGP_129S1SvImJ_T0097714.1 MGP_129S1SvImJ_G0036169.1 mouse_genomes_project X 148275651 148299741 + MGP_129S1SvImJ_P0097714 Alas2 protein_coding protein_coding MGP_129S1SvImJ_T0097715.1 MGP_129S1SvImJ_G0036169.1 mouse_genomes_project X 148282229 148285856 + Alas2 protein_coding retained_intron MGP_129S1SvImJ_T0097716.1 MGP_129S1SvImJ_G0036169.1 mouse_genomes_project X 148295508 148299741 + Alas2 protein_coding processed_transcript MGP_129S1SvImJ_T0096307.1 MGP_129S1SvImJ_G0035784.1 mouse_genomes_project X 67322990 67328548 + MGP_129S1SvImJ_P0096307 Gpr50 protein_coding protein_coding MGP_129S1SvImJ_T0096308.1 MGP_129S1SvImJ_G0035784.1 mouse_genomes_project X 67323289 67326683 + Gpr50 protein_coding processed_transcript MGP_129S1SvImJ_T0096309.1 MGP_129S1SvImJ_G0035784.1 mouse_genomes_project X 67323289 67326683 + Gpr50 protein_coding processed_transcript MGP_129S1SvImJ_T0005598.1 MGP_129S1SvImJ_G0004719.1 mouse_genomes_project X 31742954 31745371 + Gm14549 antisense antisense MGP_129S1SvImJ_T0096115.1 MGP_129S1SvImJ_G0035717.1 mouse_genomes_project X 48011946 48020206 + MGP_129S1SvImJ_P0096115 Ccdc160 protein_coding protein_coding MGP_129S1SvImJ_T0095726.1 MGP_129S1SvImJ_G0035585.1 mouse_genomes_project X 13043512 13167203 + MGP_129S1SvImJ_P0095726 Kdm6a protein_coding protein_coding MGP_129S1SvImJ_T0095727.1 MGP_129S1SvImJ_G0035585.1 mouse_genomes_project X 13043512 13167203 + MGP_129S1SvImJ_P0095727 Kdm6a protein_coding protein_coding MGP_129S1SvImJ_T0095728.1 MGP_129S1SvImJ_G0035585.1 mouse_genomes_project X 13043585 13144997 + Kdm6a protein_coding retained_intron MGP_129S1SvImJ_T0095729.1 MGP_129S1SvImJ_G0035585.1 mouse_genomes_project X 13043943 13165922 + MGP_129S1SvImJ_P0095729 Kdm6a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0095730.1 MGP_129S1SvImJ_G0035585.1 mouse_genomes_project X 13160901 13165527 + Kdm6a protein_coding retained_intron MGP_129S1SvImJ_T0098683.1 MGP_129S1SvImJ_G0036768.1 mouse_genomes_project X 72640789 72640897 - Gm26041 rRNA rRNA MGP_129S1SvImJ_T0016872.1 MGP_129S1SvImJ_G0014961.1 mouse_genomes_project X 155511368 155511801 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096928.1 MGP_129S1SvImJ_G0035933.1 mouse_genomes_project X 95342734 95352483 + MGP_129S1SvImJ_P0096928 Yipf6 protein_coding protein_coding MGP_129S1SvImJ_T0096929.1 MGP_129S1SvImJ_G0035933.1 mouse_genomes_project X 95343699 95350987 + MGP_129S1SvImJ_P0096929 Yipf6 protein_coding protein_coding MGP_129S1SvImJ_T0096930.1 MGP_129S1SvImJ_G0035933.1 mouse_genomes_project X 95343727 95346308 + MGP_129S1SvImJ_P0096930 Yipf6 protein_coding protein_coding MGP_129S1SvImJ_T0096931.1 MGP_129S1SvImJ_G0035933.1 mouse_genomes_project X 95344187 95352258 + Yipf6 protein_coding retained_intron MGP_129S1SvImJ_T0096932.1 MGP_129S1SvImJ_G0035933.1 mouse_genomes_project X 95344187 95356369 + MGP_129S1SvImJ_P0096932 Yipf6 protein_coding protein_coding MGP_129S1SvImJ_T0096933.1 MGP_129S1SvImJ_G0035933.1 mouse_genomes_project X 95344633 95351387 + Yipf6 protein_coding retained_intron MGP_129S1SvImJ_T0096614.1 MGP_129S1SvImJ_G0035843.1 mouse_genomes_project X 70153718 70156035 - MGP_129S1SvImJ_P0096614 Lage3 protein_coding protein_coding MGP_129S1SvImJ_T0096615.1 MGP_129S1SvImJ_G0035843.1 mouse_genomes_project X 70154603 70156059 - MGP_129S1SvImJ_P0096615 Lage3 protein_coding protein_coding MGP_129S1SvImJ_T0096616.1 MGP_129S1SvImJ_G0035843.1 mouse_genomes_project X 70154604 70156016 - MGP_129S1SvImJ_P0096616 Lage3 protein_coding protein_coding MGP_129S1SvImJ_T0011150.1 MGP_129S1SvImJ_G0009266.1 mouse_genomes_project X 18858626 18858728 + Gm25299 miRNA miRNA MGP_129S1SvImJ_T0095850.1 MGP_129S1SvImJ_G0035622.1 mouse_genomes_project X 31523669 31562118 - MGP_129S1SvImJ_P0095850 Akap17b protein_coding protein_coding MGP_129S1SvImJ_T0095851.1 MGP_129S1SvImJ_G0035622.1 mouse_genomes_project X 31527234 31561819 - MGP_129S1SvImJ_P0095851 Akap17b protein_coding protein_coding MGP_129S1SvImJ_T0097189.1 MGP_129S1SvImJ_G0036003.1 mouse_genomes_project X 102931050 102931469 + Tlr13 protein_coding retained_intron MGP_129S1SvImJ_T0097190.1 MGP_129S1SvImJ_G0036003.1 mouse_genomes_project X 102931075 102952280 + MGP_129S1SvImJ_P0097190 Tlr13 protein_coding protein_coding MGP_129S1SvImJ_T0095918.1 MGP_129S1SvImJ_G0035661.1 mouse_genomes_project X 33061243 33069050 + MGP_129S1SvImJ_P0095918 Rhox13 protein_coding protein_coding MGP_129S1SvImJ_T0095628.1 MGP_129S1SvImJ_G0035551.1 mouse_genomes_project X 3716246 3717086 + MGP_129S1SvImJ_P0095628 protein_coding protein_coding MGP_129S1SvImJ_T0095868.1 MGP_129S1SvImJ_G0035627.1 mouse_genomes_project X 31823311 31838665 - MGP_129S1SvImJ_P0095868 Nkrf protein_coding protein_coding MGP_129S1SvImJ_T0097083.1 MGP_129S1SvImJ_G0035968.1 mouse_genomes_project X 98632233 98636886 - MGP_129S1SvImJ_P0097083 Rgag4 protein_coding protein_coding MGP_129S1SvImJ_T0097084.1 MGP_129S1SvImJ_G0035968.1 mouse_genomes_project X 98632233 98636994 - MGP_129S1SvImJ_P0097084 Rgag4 protein_coding protein_coding MGP_129S1SvImJ_T0097085.1 MGP_129S1SvImJ_G0035968.1 mouse_genomes_project X 98632423 98633290 - Rgag4 protein_coding processed_transcript MGP_129S1SvImJ_T0097512.1 MGP_129S1SvImJ_G0036112.1 mouse_genomes_project X 134407337 134410777 + MGP_129S1SvImJ_P0097512 Zcchc18 protein_coding protein_coding MGP_129S1SvImJ_T0097513.1 MGP_129S1SvImJ_G0036112.1 mouse_genomes_project X 134407341 134410515 + MGP_129S1SvImJ_P0097513 Zcchc18 protein_coding protein_coding MGP_129S1SvImJ_T0097514.1 MGP_129S1SvImJ_G0036112.1 mouse_genomes_project X 134407480 134412871 + MGP_129S1SvImJ_P0097514 Zcchc18 protein_coding protein_coding MGP_129S1SvImJ_T0016379.1 MGP_129S1SvImJ_G0014468.1 mouse_genomes_project X 58076305 58076786 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011223.1 MGP_129S1SvImJ_G0009339.1 mouse_genomes_project X 102145828 102145926 - Mir325 miRNA miRNA MGP_129S1SvImJ_T0097238.1 MGP_129S1SvImJ_G0036019.1 mouse_genomes_project X 105493498 105494386 - MGP_129S1SvImJ_P0097238 Gm379 protein_coding protein_coding MGP_129S1SvImJ_T0102882.1 MGP_129S1SvImJ_G0040714.1 mouse_genomes_project X 152023435 152026241 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0016799.1 MGP_129S1SvImJ_G0014888.1 mouse_genomes_project X 140142639 140143050 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016431.1 MGP_129S1SvImJ_G0014520.1 mouse_genomes_project X 70577068 70577452 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016695.1 MGP_129S1SvImJ_G0014784.1 mouse_genomes_project X 117226437 117226690 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097143.1 MGP_129S1SvImJ_G0035993.1 mouse_genomes_project X 101595807 101598123 - MGP_129S1SvImJ_P0097143 Magee2 protein_coding protein_coding MGP_129S1SvImJ_T0016517.1 MGP_129S1SvImJ_G0014606.1 mouse_genomes_project X 88229051 88231316 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097344.1 MGP_129S1SvImJ_G0036060.1 mouse_genomes_project X 131207453 131235282 + MGP_129S1SvImJ_P0097344 Cstf2 protein_coding protein_coding MGP_129S1SvImJ_T0097345.1 MGP_129S1SvImJ_G0036060.1 mouse_genomes_project X 131207463 131236055 + MGP_129S1SvImJ_P0097345 Cstf2 protein_coding protein_coding MGP_129S1SvImJ_T0097346.1 MGP_129S1SvImJ_G0036060.1 mouse_genomes_project X 131207481 131224281 + MGP_129S1SvImJ_P0097346 Cstf2 protein_coding protein_coding MGP_129S1SvImJ_T0097347.1 MGP_129S1SvImJ_G0036060.1 mouse_genomes_project X 131207577 131209753 + Cstf2 protein_coding processed_transcript MGP_129S1SvImJ_T0097348.1 MGP_129S1SvImJ_G0036060.1 mouse_genomes_project X 131207600 131236055 + Cstf2 protein_coding retained_intron MGP_129S1SvImJ_T0097349.1 MGP_129S1SvImJ_G0036060.1 mouse_genomes_project X 131207600 131210890 + MGP_129S1SvImJ_P0097349 Cstf2 protein_coding protein_coding MGP_129S1SvImJ_T0097350.1 MGP_129S1SvImJ_G0036060.1 mouse_genomes_project X 131210653 131222691 + MGP_129S1SvImJ_P0097350 Cstf2 protein_coding protein_coding MGP_129S1SvImJ_T0097351.1 MGP_129S1SvImJ_G0036060.1 mouse_genomes_project X 131214517 131222728 + MGP_129S1SvImJ_P0097351 Cstf2 protein_coding protein_coding MGP_129S1SvImJ_T0016851.1 MGP_129S1SvImJ_G0014940.1 mouse_genomes_project X 151618905 151619185 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096911.1 MGP_129S1SvImJ_G0035928.1 mouse_genomes_project X 93365699 93366496 - MGP_129S1SvImJ_P0096911 1700084M14Rik protein_coding protein_coding MGP_129S1SvImJ_T0016802.1 MGP_129S1SvImJ_G0014891.1 mouse_genomes_project X 141698203 141700067 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097989.1 MGP_129S1SvImJ_G0036232.1 mouse_genomes_project X 158554348 158647320 - MGP_129S1SvImJ_P0097989 Ppef1 protein_coding protein_coding MGP_129S1SvImJ_T0097990.1 MGP_129S1SvImJ_G0036232.1 mouse_genomes_project X 158571032 158658288 - MGP_129S1SvImJ_P0097990 Ppef1 protein_coding protein_coding MGP_129S1SvImJ_T0097991.1 MGP_129S1SvImJ_G0036232.1 mouse_genomes_project X 158621514 158647284 - MGP_129S1SvImJ_P0097991 Ppef1 protein_coding protein_coding MGP_129S1SvImJ_T0097952.1 MGP_129S1SvImJ_G0036227.1 mouse_genomes_project X 157529752 157890973 + MGP_129S1SvImJ_P0097952 Sh3kbp1 protein_coding protein_coding MGP_129S1SvImJ_T0097953.1 MGP_129S1SvImJ_G0036227.1 mouse_genomes_project X 157530021 157829150 + Sh3kbp1 protein_coding retained_intron MGP_129S1SvImJ_T0097954.1 MGP_129S1SvImJ_G0036227.1 mouse_genomes_project X 157530021 157886073 + MGP_129S1SvImJ_P0097954 Sh3kbp1 protein_coding protein_coding MGP_129S1SvImJ_T0097955.1 MGP_129S1SvImJ_G0036227.1 mouse_genomes_project X 157599133 157771408 + MGP_129S1SvImJ_P0097955 Sh3kbp1 protein_coding protein_coding MGP_129S1SvImJ_T0097956.1 MGP_129S1SvImJ_G0036227.1 mouse_genomes_project X 157610402 157887071 + MGP_129S1SvImJ_P0097956 Sh3kbp1 protein_coding protein_coding MGP_129S1SvImJ_T0097957.1 MGP_129S1SvImJ_G0036227.1 mouse_genomes_project X 157610402 157886769 + MGP_129S1SvImJ_P0097957 Sh3kbp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097958.1 MGP_129S1SvImJ_G0036227.1 mouse_genomes_project X 157745203 157888568 + MGP_129S1SvImJ_P0097958 Sh3kbp1 protein_coding protein_coding MGP_129S1SvImJ_T0097959.1 MGP_129S1SvImJ_G0036227.1 mouse_genomes_project X 157745216 157887071 + MGP_129S1SvImJ_P0097959 Sh3kbp1 protein_coding protein_coding MGP_129S1SvImJ_T0097960.1 MGP_129S1SvImJ_G0036227.1 mouse_genomes_project X 157745611 157888820 + Sh3kbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0097961.1 MGP_129S1SvImJ_G0036227.1 mouse_genomes_project X 157827923 157886223 + MGP_129S1SvImJ_P0097961 Sh3kbp1 protein_coding protein_coding MGP_129S1SvImJ_T0097962.1 MGP_129S1SvImJ_G0036227.1 mouse_genomes_project X 157853900 157884783 + Sh3kbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0097963.1 MGP_129S1SvImJ_G0036227.1 mouse_genomes_project X 157854896 157888821 + Sh3kbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0097964.1 MGP_129S1SvImJ_G0036227.1 mouse_genomes_project X 157855115 157887071 + Sh3kbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0097965.1 MGP_129S1SvImJ_G0036227.1 mouse_genomes_project X 157855221 157886094 + Sh3kbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0096881.1 MGP_129S1SvImJ_G0035920.1 mouse_genomes_project X 92052177 92275720 + Zc3h12b protein_coding processed_transcript MGP_129S1SvImJ_T0096883.1 MGP_129S1SvImJ_G0035920.1 mouse_genomes_project X 92249580 92278932 + MGP_129S1SvImJ_P0096883 Zc3h12b protein_coding protein_coding MGP_129S1SvImJ_T0096884.1 MGP_129S1SvImJ_G0035920.1 mouse_genomes_project X 92250391 92283599 + MGP_129S1SvImJ_P0096884 Zc3h12b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0101792.1 MGP_129S1SvImJ_G0039762.1 mouse_genomes_project X 10003990 10004872 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101793.1 MGP_129S1SvImJ_G0039762.1 mouse_genomes_project X 10004237 10004786 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0097890.1 MGP_129S1SvImJ_G0036212.1 mouse_genomes_project X 153155142 153156282 + Acot9 protein_coding processed_transcript MGP_129S1SvImJ_T0097891.1 MGP_129S1SvImJ_G0036212.1 mouse_genomes_project X 153155142 153192919 + MGP_129S1SvImJ_P0097891 Acot9 protein_coding protein_coding MGP_129S1SvImJ_T0097892.1 MGP_129S1SvImJ_G0036212.1 mouse_genomes_project X 153155204 153192911 + MGP_129S1SvImJ_P0097892 Acot9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097893.1 MGP_129S1SvImJ_G0036212.1 mouse_genomes_project X 153189107 153192178 + Acot9 protein_coding retained_intron MGP_129S1SvImJ_T0101551.1 MGP_129S1SvImJ_G0039618.1 mouse_genomes_project X 148529146 148529274 - Gm24907 snoRNA snoRNA MGP_129S1SvImJ_T0016667.1 MGP_129S1SvImJ_G0014756.1 mouse_genomes_project X 111783219 111783678 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016856.1 MGP_129S1SvImJ_G0014945.1 mouse_genomes_project X 153060209 153060839 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011802.1 MGP_129S1SvImJ_G0009918.1 mouse_genomes_project X 160294604 160294878 - Gm23867 misc_RNA misc_RNA MGP_129S1SvImJ_T0002499.1 MGP_129S1SvImJ_G0002408.1 mouse_genomes_project X 69149781 69152596 + TEC TEC MGP_129S1SvImJ_T0016440.1 MGP_129S1SvImJ_G0014529.1 mouse_genomes_project X 72238358 72238662 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016439.1 MGP_129S1SvImJ_G0014528.1 mouse_genomes_project X 72183904 72184676 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100290.1 MGP_129S1SvImJ_G0038357.1 mouse_genomes_project X 149139372 149139522 + Gm22248 snRNA snRNA MGP_129S1SvImJ_T0097574.1 MGP_129S1SvImJ_G0036130.1 mouse_genomes_project X 137411138 137523760 - MGP_129S1SvImJ_P0097574 Rbm41 protein_coding protein_coding MGP_129S1SvImJ_T0097575.1 MGP_129S1SvImJ_G0036130.1 mouse_genomes_project X 137466357 137523722 - MGP_129S1SvImJ_P0097575 Rbm41 protein_coding protein_coding MGP_129S1SvImJ_T0097576.1 MGP_129S1SvImJ_G0036130.1 mouse_genomes_project X 137466389 137523707 - MGP_129S1SvImJ_P0097576 Rbm41 protein_coding protein_coding MGP_129S1SvImJ_T0097577.1 MGP_129S1SvImJ_G0036130.1 mouse_genomes_project X 137467220 137523716 - MGP_129S1SvImJ_P0097577 Rbm41 protein_coding protein_coding MGP_129S1SvImJ_T0097578.1 MGP_129S1SvImJ_G0036130.1 mouse_genomes_project X 137491491 137519249 - Rbm41 protein_coding retained_intron MGP_129S1SvImJ_T0097579.1 MGP_129S1SvImJ_G0036130.1 mouse_genomes_project X 137492277 137523701 - Rbm41 protein_coding processed_transcript MGP_129S1SvImJ_T0097580.1 MGP_129S1SvImJ_G0036130.1 mouse_genomes_project X 137517523 137523731 - Rbm41 protein_coding retained_intron MGP_129S1SvImJ_T0098677.1 MGP_129S1SvImJ_G0036762.1 mouse_genomes_project X 8075033 8075145 - n-R5s3 rRNA rRNA MGP_129S1SvImJ_T0016179.1 MGP_129S1SvImJ_G0014268.1 mouse_genomes_project X 300281 302241 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101818.1 MGP_129S1SvImJ_G0039779.1 mouse_genomes_project X 167583985 167585656 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101507.1 MGP_129S1SvImJ_G0039574.1 mouse_genomes_project X 16416271 16416402 - Gm22592 snoRNA snoRNA MGP_129S1SvImJ_T0098109.1 MGP_129S1SvImJ_G0036264.1 mouse_genomes_project X 164370033 164520156 + MGP_129S1SvImJ_P0098109 Gpm6b protein_coding protein_coding MGP_129S1SvImJ_T0098110.1 MGP_129S1SvImJ_G0036264.1 mouse_genomes_project X 164370094 164520156 + MGP_129S1SvImJ_P0098110 Gpm6b protein_coding protein_coding MGP_129S1SvImJ_T0098111.1 MGP_129S1SvImJ_G0036264.1 mouse_genomes_project X 164370094 164520156 + MGP_129S1SvImJ_P0098111 Gpm6b protein_coding protein_coding MGP_129S1SvImJ_T0098112.1 MGP_129S1SvImJ_G0036264.1 mouse_genomes_project X 164475975 164515169 + MGP_129S1SvImJ_P0098112 Gpm6b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0098113.1 MGP_129S1SvImJ_G0036264.1 mouse_genomes_project X 164475975 164520156 + MGP_129S1SvImJ_P0098113 Gpm6b protein_coding protein_coding MGP_129S1SvImJ_T0098114.1 MGP_129S1SvImJ_G0036264.1 mouse_genomes_project X 164475975 164520156 + MGP_129S1SvImJ_P0098114 Gpm6b protein_coding protein_coding MGP_129S1SvImJ_T0098115.1 MGP_129S1SvImJ_G0036264.1 mouse_genomes_project X 164475975 164520156 + MGP_129S1SvImJ_P0098115 Gpm6b protein_coding protein_coding MGP_129S1SvImJ_T0098116.1 MGP_129S1SvImJ_G0036264.1 mouse_genomes_project X 164475975 164520156 + MGP_129S1SvImJ_P0098116 Gpm6b protein_coding protein_coding MGP_129S1SvImJ_T0098117.1 MGP_129S1SvImJ_G0036264.1 mouse_genomes_project X 164475975 164515169 + MGP_129S1SvImJ_P0098117 Gpm6b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0098118.1 MGP_129S1SvImJ_G0036264.1 mouse_genomes_project X 164475975 164520156 + MGP_129S1SvImJ_P0098118 Gpm6b protein_coding protein_coding MGP_129S1SvImJ_T0098119.1 MGP_129S1SvImJ_G0036264.1 mouse_genomes_project X 164475975 164520156 + MGP_129S1SvImJ_P0098119 Gpm6b protein_coding protein_coding MGP_129S1SvImJ_T0098120.1 MGP_129S1SvImJ_G0036264.1 mouse_genomes_project X 164476125 164504448 + Gpm6b protein_coding retained_intron MGP_129S1SvImJ_T0016256.1 MGP_129S1SvImJ_G0014345.1 mouse_genomes_project X 15737695 15738065 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095906.1 MGP_129S1SvImJ_G0035652.1 mouse_genomes_project X 32759476 33255394 + MGP_129S1SvImJ_P0095906 protein_coding protein_coding MGP_129S1SvImJ_T0005602.1 MGP_129S1SvImJ_G0004723.1 mouse_genomes_project X 47508869 47547168 + Gm14582 antisense antisense MGP_129S1SvImJ_T0101529.1 MGP_129S1SvImJ_G0039596.1 mouse_genomes_project X 90868927 90869037 - Gm24595 snoRNA snoRNA MGP_129S1SvImJ_T0011784.1 MGP_129S1SvImJ_G0009900.1 mouse_genomes_project X 100126886 100126967 + Gm27520 misc_RNA misc_RNA MGP_129S1SvImJ_T0016400.1 MGP_129S1SvImJ_G0014489.1 mouse_genomes_project X 63610717 63611020 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100271.1 MGP_129S1SvImJ_G0038338.1 mouse_genomes_project X 105858777 105858944 - Gm23322 snRNA snRNA MGP_129S1SvImJ_T0016663.1 MGP_129S1SvImJ_G0014752.1 mouse_genomes_project X 111243012 111244373 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016875.1 MGP_129S1SvImJ_G0014964.1 mouse_genomes_project X 155557531 155557752 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098695.1 MGP_129S1SvImJ_G0036780.1 mouse_genomes_project X 160223844 160223972 + Gm27490 rRNA rRNA MGP_129S1SvImJ_T0011153.1 MGP_129S1SvImJ_G0009269.1 mouse_genomes_project X 33745685 33745751 - Gm25642 miRNA miRNA MGP_129S1SvImJ_T0097814.1 MGP_129S1SvImJ_G0036181.1 mouse_genomes_project X 149759809 149771524 - MGP_129S1SvImJ_P0097814 Ribc1 protein_coding protein_coding MGP_129S1SvImJ_T0097815.1 MGP_129S1SvImJ_G0036181.1 mouse_genomes_project X 149764806 149771499 - Ribc1 protein_coding processed_transcript MGP_129S1SvImJ_T0016505.1 MGP_129S1SvImJ_G0014594.1 mouse_genomes_project X 86332556 86333312 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100225.1 MGP_129S1SvImJ_G0038292.1 mouse_genomes_project X 8882103 8882194 - Gm25552 snRNA snRNA MGP_129S1SvImJ_T0011775.1 MGP_129S1SvImJ_G0009891.1 mouse_genomes_project X 48560216 48560523 + Gm23718 misc_RNA misc_RNA MGP_129S1SvImJ_T0096098.1 MGP_129S1SvImJ_G0035711.1 mouse_genomes_project X 46281705 46290862 - Mbnl3 protein_coding retained_intron MGP_129S1SvImJ_T0096099.1 MGP_129S1SvImJ_G0035711.1 mouse_genomes_project X 46281742 46335078 - MGP_129S1SvImJ_P0096099 Mbnl3 protein_coding protein_coding MGP_129S1SvImJ_T0096100.1 MGP_129S1SvImJ_G0035711.1 mouse_genomes_project X 46282138 46306551 - Mbnl3 protein_coding processed_transcript MGP_129S1SvImJ_T0096101.1 MGP_129S1SvImJ_G0035711.1 mouse_genomes_project X 46282260 46334998 - MGP_129S1SvImJ_P0096101 Mbnl3 protein_coding protein_coding MGP_129S1SvImJ_T0096102.1 MGP_129S1SvImJ_G0035711.1 mouse_genomes_project X 46334820 46378270 - Mbnl3 protein_coding processed_transcript MGP_129S1SvImJ_T0095895.1 MGP_129S1SvImJ_G0035644.1 mouse_genomes_project X 32641068 32652633 - MGP_129S1SvImJ_P0095895 protein_coding protein_coding MGP_129S1SvImJ_T0097473.1 MGP_129S1SvImJ_G0036100.1 mouse_genomes_project X 133903321 133924354 + MGP_129S1SvImJ_P0097473 protein_coding protein_coding MGP_129S1SvImJ_T0097474.1 MGP_129S1SvImJ_G0036100.1 mouse_genomes_project X 133903335 133924602 + MGP_129S1SvImJ_P0097474 protein_coding protein_coding MGP_129S1SvImJ_T0016664.1 MGP_129S1SvImJ_G0014753.1 mouse_genomes_project X 111540169 111540608 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011205.1 MGP_129S1SvImJ_G0009321.1 mouse_genomes_project X 69809083 69809171 - Mir718 miRNA miRNA MGP_129S1SvImJ_T0101526.1 MGP_129S1SvImJ_G0039593.1 mouse_genomes_project X 78619311 78619443 - Gm24470 snoRNA snoRNA MGP_129S1SvImJ_T0095434.1 MGP_129S1SvImJ_G0035509.1 mouse_genomes_project X 1743586 1914397 - MGP_129S1SvImJ_P0095434 Clcn5 protein_coding protein_coding MGP_129S1SvImJ_T0095435.1 MGP_129S1SvImJ_G0035509.1 mouse_genomes_project X 1743846 1799241 - MGP_129S1SvImJ_P0095435 Clcn5 protein_coding protein_coding MGP_129S1SvImJ_T0095436.1 MGP_129S1SvImJ_G0035509.1 mouse_genomes_project X 1744294 1773369 - Clcn5 protein_coding retained_intron MGP_129S1SvImJ_T0095437.1 MGP_129S1SvImJ_G0035509.1 mouse_genomes_project X 1755316 1914522 - MGP_129S1SvImJ_P0095437 Clcn5 protein_coding protein_coding MGP_129S1SvImJ_T0095438.1 MGP_129S1SvImJ_G0035509.1 mouse_genomes_project X 1799226 1914334 - Clcn5 protein_coding processed_transcript MGP_129S1SvImJ_T0095856.1 MGP_129S1SvImJ_G0035625.1 mouse_genomes_project X 31751908 31796294 - MGP_129S1SvImJ_P0095856 C330007P06Rik protein_coding protein_coding MGP_129S1SvImJ_T0095857.1 MGP_129S1SvImJ_G0035625.1 mouse_genomes_project X 31768444 31785818 - C330007P06Rik protein_coding retained_intron MGP_129S1SvImJ_T0095858.1 MGP_129S1SvImJ_G0035625.1 mouse_genomes_project X 31777329 31796302 - MGP_129S1SvImJ_P0095858 C330007P06Rik protein_coding protein_coding MGP_129S1SvImJ_T0095859.1 MGP_129S1SvImJ_G0035625.1 mouse_genomes_project X 31777336 31810018 - MGP_129S1SvImJ_P0095859 C330007P06Rik protein_coding protein_coding MGP_129S1SvImJ_T0095860.1 MGP_129S1SvImJ_G0035625.1 mouse_genomes_project X 31779944 31796229 - C330007P06Rik protein_coding processed_transcript MGP_129S1SvImJ_T0095861.1 MGP_129S1SvImJ_G0035625.1 mouse_genomes_project X 31785286 31796211 - C330007P06Rik protein_coding retained_intron MGP_129S1SvImJ_T0096802.1 MGP_129S1SvImJ_G0035895.1 mouse_genomes_project X 86010041 86013265 + MGP_129S1SvImJ_P0096802 4932429P05Rik protein_coding protein_coding MGP_129S1SvImJ_T0095919.1 MGP_129S1SvImJ_G0035662.1 mouse_genomes_project X 33134813 33143297 + MGP_129S1SvImJ_P0095919 Zbtb33 protein_coding protein_coding MGP_129S1SvImJ_T0095920.1 MGP_129S1SvImJ_G0035662.1 mouse_genomes_project X 33134832 33139705 + MGP_129S1SvImJ_P0095920 Zbtb33 protein_coding protein_coding MGP_129S1SvImJ_T0095921.1 MGP_129S1SvImJ_G0035662.1 mouse_genomes_project X 33134854 33139089 + MGP_129S1SvImJ_P0095921 Zbtb33 protein_coding protein_coding MGP_129S1SvImJ_T0095642.1 MGP_129S1SvImJ_G0035558.1 mouse_genomes_project X 4579018 4579599 + MGP_129S1SvImJ_P0095642 Hypm protein_coding protein_coding MGP_129S1SvImJ_T0016461.1 MGP_129S1SvImJ_G0014550.1 mouse_genomes_project X 75960754 75961456 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100266.1 MGP_129S1SvImJ_G0038333.1 mouse_genomes_project X 101773651 101773762 - Gm22090 snRNA snRNA MGP_129S1SvImJ_T0098122.1 MGP_129S1SvImJ_G0036266.1 mouse_genomes_project X 164565573 164578138 + MGP_129S1SvImJ_P0098122 Trappc2 protein_coding protein_coding MGP_129S1SvImJ_T0098123.1 MGP_129S1SvImJ_G0036266.1 mouse_genomes_project X 164565775 164576975 + Trappc2 protein_coding retained_intron MGP_129S1SvImJ_T0098124.1 MGP_129S1SvImJ_G0036266.1 mouse_genomes_project X 164565775 164578136 + MGP_129S1SvImJ_P0098124 Trappc2 protein_coding protein_coding MGP_129S1SvImJ_T0098125.1 MGP_129S1SvImJ_G0036266.1 mouse_genomes_project X 164570302 164578138 + MGP_129S1SvImJ_P0098125 Trappc2 protein_coding protein_coding MGP_129S1SvImJ_T0101546.1 MGP_129S1SvImJ_G0039613.1 mouse_genomes_project X 134584829 134584948 + Gm23679 snoRNA snoRNA MGP_129S1SvImJ_T0016268.1 MGP_129S1SvImJ_G0014357.1 mouse_genomes_project X 30686333 30687566 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097542.1 MGP_129S1SvImJ_G0036121.1 mouse_genomes_project X 136685989 136714942 + MGP_129S1SvImJ_P0097542 Mum1l1 protein_coding protein_coding MGP_129S1SvImJ_T0097543.1 MGP_129S1SvImJ_G0036121.1 mouse_genomes_project X 136685989 136711584 + MGP_129S1SvImJ_P0097543 Mum1l1 protein_coding protein_coding MGP_129S1SvImJ_T0097544.1 MGP_129S1SvImJ_G0036121.1 mouse_genomes_project X 136685991 136714944 + MGP_129S1SvImJ_P0097544 Mum1l1 protein_coding protein_coding MGP_129S1SvImJ_T0097545.1 MGP_129S1SvImJ_G0036121.1 mouse_genomes_project X 136686055 136689233 + Mum1l1 protein_coding retained_intron MGP_129S1SvImJ_T0097546.1 MGP_129S1SvImJ_G0036121.1 mouse_genomes_project X 136693113 136714944 + MGP_129S1SvImJ_P0097546 Mum1l1 protein_coding protein_coding MGP_129S1SvImJ_T0097547.1 MGP_129S1SvImJ_G0036121.1 mouse_genomes_project X 136693113 136714944 + MGP_129S1SvImJ_P0097547 Mum1l1 protein_coding protein_coding MGP_129S1SvImJ_T0097548.1 MGP_129S1SvImJ_G0036121.1 mouse_genomes_project X 136693113 136711411 + MGP_129S1SvImJ_P0097548 Mum1l1 protein_coding protein_coding MGP_129S1SvImJ_T0097549.1 MGP_129S1SvImJ_G0036121.1 mouse_genomes_project X 136693113 136711650 + MGP_129S1SvImJ_P0097549 Mum1l1 protein_coding protein_coding MGP_129S1SvImJ_T0011234.1 MGP_129S1SvImJ_G0009350.1 mouse_genomes_project X 140263527 140263625 + miRNA miRNA MGP_129S1SvImJ_T0097773.1 MGP_129S1SvImJ_G0036177.1 mouse_genomes_project X 149098640 149223413 + Fam120c protein_coding retained_intron MGP_129S1SvImJ_T0097774.1 MGP_129S1SvImJ_G0036177.1 mouse_genomes_project X 149098640 149223413 + MGP_129S1SvImJ_P0097774 Fam120c protein_coding protein_coding MGP_129S1SvImJ_T0016269.1 MGP_129S1SvImJ_G0014358.1 mouse_genomes_project X 31111579 31111954 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097318.1 MGP_129S1SvImJ_G0036050.1 mouse_genomes_project X 124394249 124395855 + MGP_129S1SvImJ_P0097318 4921511C20Rik protein_coding protein_coding MGP_129S1SvImJ_T0098693.1 MGP_129S1SvImJ_G0036778.1 mouse_genomes_project X 155525964 155526058 - Gm23381 rRNA rRNA MGP_129S1SvImJ_T0016372.1 MGP_129S1SvImJ_G0014461.1 mouse_genomes_project X 57196186 57197724 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096994.1 MGP_129S1SvImJ_G0035950.1 mouse_genomes_project X 97317735 97538643 - MGP_129S1SvImJ_P0096994 Tex11 protein_coding protein_coding MGP_129S1SvImJ_T0096995.1 MGP_129S1SvImJ_G0035950.1 mouse_genomes_project X 97317735 97538671 - MGP_129S1SvImJ_P0096995 Tex11 protein_coding protein_coding MGP_129S1SvImJ_T0096996.1 MGP_129S1SvImJ_G0035950.1 mouse_genomes_project X 97350768 97538671 - MGP_129S1SvImJ_P0096996 Tex11 protein_coding protein_coding MGP_129S1SvImJ_T0096081.1 MGP_129S1SvImJ_G0035704.1 mouse_genomes_project X 44937696 44943409 - MGP_129S1SvImJ_P0096081 Igsf1 protein_coding protein_coding MGP_129S1SvImJ_T0096082.1 MGP_129S1SvImJ_G0035704.1 mouse_genomes_project X 44937696 44956441 - MGP_129S1SvImJ_P0096082 Igsf1 protein_coding protein_coding MGP_129S1SvImJ_T0096083.1 MGP_129S1SvImJ_G0035704.1 mouse_genomes_project X 44937705 44950059 - MGP_129S1SvImJ_P0096083 Igsf1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0096084.1 MGP_129S1SvImJ_G0035704.1 mouse_genomes_project X 44941507 44954057 - MGP_129S1SvImJ_P0096084 Igsf1 protein_coding protein_coding MGP_129S1SvImJ_T0096085.1 MGP_129S1SvImJ_G0035704.1 mouse_genomes_project X 44951658 44956441 - MGP_129S1SvImJ_P0096085 Igsf1 protein_coding protein_coding MGP_129S1SvImJ_T0096086.1 MGP_129S1SvImJ_G0035704.1 mouse_genomes_project X 44953637 44956427 - Igsf1 protein_coding processed_transcript MGP_129S1SvImJ_T0016914.1 MGP_129S1SvImJ_G0015003.1 mouse_genomes_project X 164195975 164199111 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016550.1 MGP_129S1SvImJ_G0014639.1 mouse_genomes_project X 93285848 93288213 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016842.1 MGP_129S1SvImJ_G0014931.1 mouse_genomes_project X 149536362 149536749 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095849.1 MGP_129S1SvImJ_G0035621.1 mouse_genomes_project X 31513554 31521435 + MGP_129S1SvImJ_P0095849 Pgrmc1 protein_coding protein_coding MGP_129S1SvImJ_T0100264.1 MGP_129S1SvImJ_G0038331.1 mouse_genomes_project X 98467960 98468055 - Gm25828 snRNA snRNA MGP_129S1SvImJ_T0016832.1 MGP_129S1SvImJ_G0014921.1 mouse_genomes_project X 148415151 148415799 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016415.1 MGP_129S1SvImJ_G0014504.1 mouse_genomes_project X 66278892 66279235 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097931.1 MGP_129S1SvImJ_G0036223.1 mouse_genomes_project X 157096151 157259159 + MGP_129S1SvImJ_P0097931 Rps6ka3 protein_coding protein_coding MGP_129S1SvImJ_T0097932.1 MGP_129S1SvImJ_G0036223.1 mouse_genomes_project X 157147561 157201602 + MGP_129S1SvImJ_P0097932 Rps6ka3 protein_coding protein_coding MGP_129S1SvImJ_T0097933.1 MGP_129S1SvImJ_G0036223.1 mouse_genomes_project X 157148534 157262901 + MGP_129S1SvImJ_P0097933 Rps6ka3 protein_coding protein_coding MGP_129S1SvImJ_T0097934.1 MGP_129S1SvImJ_G0036223.1 mouse_genomes_project X 157148601 157220313 + MGP_129S1SvImJ_P0097934 Rps6ka3 protein_coding protein_coding MGP_129S1SvImJ_T0097935.1 MGP_129S1SvImJ_G0036223.1 mouse_genomes_project X 157148802 157220403 + MGP_129S1SvImJ_P0097935 Rps6ka3 protein_coding protein_coding MGP_129S1SvImJ_T0097936.1 MGP_129S1SvImJ_G0036223.1 mouse_genomes_project X 157168955 157218811 + MGP_129S1SvImJ_P0097936 Rps6ka3 protein_coding protein_coding MGP_129S1SvImJ_T0097937.1 MGP_129S1SvImJ_G0036223.1 mouse_genomes_project X 157193357 157222816 + MGP_129S1SvImJ_P0097937 Rps6ka3 protein_coding protein_coding MGP_129S1SvImJ_T0097938.1 MGP_129S1SvImJ_G0036223.1 mouse_genomes_project X 157256977 157258162 + Rps6ka3 protein_coding processed_transcript MGP_129S1SvImJ_T0097939.1 MGP_129S1SvImJ_G0036223.1 mouse_genomes_project X 157257062 157258397 + Rps6ka3 protein_coding retained_intron MGP_129S1SvImJ_T0016705.1 MGP_129S1SvImJ_G0014794.1 mouse_genomes_project X 118983598 118985155 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100241.1 MGP_129S1SvImJ_G0038308.1 mouse_genomes_project X 43366927 43367086 + Gm24038 snRNA snRNA MGP_129S1SvImJ_T0097869.1 MGP_129S1SvImJ_G0036199.1 mouse_genomes_project X 151664695 151665981 + MGP_129S1SvImJ_P0097869 Spin2c protein_coding protein_coding MGP_129S1SvImJ_T0097870.1 MGP_129S1SvImJ_G0036199.1 mouse_genomes_project X 151664711 151665994 + MGP_129S1SvImJ_P0097870 Spin2c protein_coding protein_coding MGP_129S1SvImJ_T0097871.1 MGP_129S1SvImJ_G0036199.1 mouse_genomes_project X 151664763 151666714 + MGP_129S1SvImJ_P0097871 Spin2c protein_coding protein_coding MGP_129S1SvImJ_T0016816.1 MGP_129S1SvImJ_G0014905.1 mouse_genomes_project X 143316958 143317416 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011214.1 MGP_129S1SvImJ_G0009330.1 mouse_genomes_project X 96830303 96830392 + Mir676 miRNA miRNA MGP_129S1SvImJ_T0097087.1 MGP_129S1SvImJ_G0035969.1 mouse_genomes_project X 98694857 98706537 + MGP_129S1SvImJ_P0097087 Pin4 protein_coding protein_coding MGP_129S1SvImJ_T0097088.1 MGP_129S1SvImJ_G0035969.1 mouse_genomes_project X 98694932 98706519 + MGP_129S1SvImJ_P0097088 Pin4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0097089.1 MGP_129S1SvImJ_G0035969.1 mouse_genomes_project X 98694979 98706534 + Pin4 protein_coding processed_transcript MGP_129S1SvImJ_T0016789.1 MGP_129S1SvImJ_G0014878.1 mouse_genomes_project X 139362021 139362277 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016798.1 MGP_129S1SvImJ_G0014887.1 mouse_genomes_project X 140046984 140047416 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016423.1 MGP_129S1SvImJ_G0014512.1 mouse_genomes_project X 69789202 69790003 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096153.1 MGP_129S1SvImJ_G0035737.1 mouse_genomes_project X 51834326 51839864 - MGP_129S1SvImJ_P0096153 Gm648 protein_coding protein_coding MGP_129S1SvImJ_T0016847.1 MGP_129S1SvImJ_G0014936.1 mouse_genomes_project X 151029754 151030028 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096660.1 MGP_129S1SvImJ_G0035849.1 mouse_genomes_project X 70380937 70381873 - MGP_129S1SvImJ_P0096660 Olfr1326-ps1 protein_coding protein_coding MGP_129S1SvImJ_T0101554.1 MGP_129S1SvImJ_G0039621.1 mouse_genomes_project X 154350404 154350501 - Gm23404 snoRNA snoRNA MGP_129S1SvImJ_T0005623.1 MGP_129S1SvImJ_G0004741.1 mouse_genomes_project X 98339136 98340823 - antisense antisense MGP_129S1SvImJ_T0016588.1 MGP_129S1SvImJ_G0014677.1 mouse_genomes_project X 99704509 99704757 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016288.1 MGP_129S1SvImJ_G0014377.1 mouse_genomes_project X 35006071 35006742 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011146.1 MGP_129S1SvImJ_G0009262.1 mouse_genomes_project X 14016704 14016799 - Mir221 miRNA miRNA MGP_129S1SvImJ_T0097460.1 MGP_129S1SvImJ_G0036095.1 mouse_genomes_project X 133584328 133586329 - MGP_129S1SvImJ_P0097460 Bex1 protein_coding protein_coding MGP_129S1SvImJ_T0097461.1 MGP_129S1SvImJ_G0036095.1 mouse_genomes_project X 133584329 133586259 - MGP_129S1SvImJ_P0097461 Bex1 protein_coding protein_coding MGP_129S1SvImJ_T0097462.1 MGP_129S1SvImJ_G0036095.1 mouse_genomes_project X 133584369 133586300 - MGP_129S1SvImJ_P0097462 Bex1 protein_coding protein_coding MGP_129S1SvImJ_T0097463.1 MGP_129S1SvImJ_G0036095.1 mouse_genomes_project X 133584900 133586196 - Bex1 protein_coding retained_intron MGP_129S1SvImJ_T0011216.1 MGP_129S1SvImJ_G0009332.1 mouse_genomes_project X 98842667 98842763 - Gm26318 miRNA miRNA MGP_129S1SvImJ_T0016436.1 MGP_129S1SvImJ_G0014525.1 mouse_genomes_project X 71322374 71322666 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009381.1 MGP_129S1SvImJ_G0007534.1 mouse_genomes_project X 33699617 33730395 - Gm14565 lincRNA lincRNA MGP_129S1SvImJ_T0095854.1 MGP_129S1SvImJ_G0035624.1 mouse_genomes_project X 31724663 31726978 + MGP_129S1SvImJ_P0095854 Slc25a5 protein_coding protein_coding MGP_129S1SvImJ_T0095855.1 MGP_129S1SvImJ_G0035624.1 mouse_genomes_project X 31725236 31726621 + Slc25a5 protein_coding retained_intron MGP_129S1SvImJ_T0016358.1 MGP_129S1SvImJ_G0014447.1 mouse_genomes_project X 55402919 55403515 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095689.1 MGP_129S1SvImJ_G0035571.1 mouse_genomes_project X 8141732 8156270 + MGP_129S1SvImJ_P0095689 Ddx3x protein_coding protein_coding MGP_129S1SvImJ_T0095690.1 MGP_129S1SvImJ_G0035571.1 mouse_genomes_project X 8141784 8154240 + Ddx3x protein_coding processed_transcript MGP_129S1SvImJ_T0095691.1 MGP_129S1SvImJ_G0035571.1 mouse_genomes_project X 8141794 8150090 + Ddx3x protein_coding retained_intron MGP_129S1SvImJ_T0095692.1 MGP_129S1SvImJ_G0035571.1 mouse_genomes_project X 8149501 8151070 + Ddx3x protein_coding retained_intron MGP_129S1SvImJ_T0095693.1 MGP_129S1SvImJ_G0035571.1 mouse_genomes_project X 8150002 8152133 + Ddx3x protein_coding retained_intron MGP_129S1SvImJ_T0011242.1 MGP_129S1SvImJ_G0009358.1 mouse_genomes_project X 144726889 144727027 + Gm24627 miRNA miRNA MGP_129S1SvImJ_T0005589.1 MGP_129S1SvImJ_G0004715.1 mouse_genomes_project X 2264552 2268896 - Gm14703 antisense antisense MGP_129S1SvImJ_T0096154.1 MGP_129S1SvImJ_G0035738.1 mouse_genomes_project X 51881589 51894147 - MGP_129S1SvImJ_P0096154 Mmgt1 protein_coding protein_coding MGP_129S1SvImJ_T0018633.1 MGP_129S1SvImJ_G0015769.1 mouse_genomes_project X 2009860 2019129 - 2010204K13Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018634.1 MGP_129S1SvImJ_G0015769.1 mouse_genomes_project X 2010130 2010869 - 2010204K13Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018635.1 MGP_129S1SvImJ_G0015769.1 mouse_genomes_project X 2010146 2021032 - 2010204K13Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018636.1 MGP_129S1SvImJ_G0015769.1 mouse_genomes_project X 2010149 2050312 - 2010204K13Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0097124.1 MGP_129S1SvImJ_G0035981.1 mouse_genomes_project X 99791401 99793866 - MGP_129S1SvImJ_P0097124 Nap1l2 protein_coding protein_coding MGP_129S1SvImJ_T0016248.1 MGP_129S1SvImJ_G0014337.1 mouse_genomes_project X 14632695 14633028 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095744.1 MGP_129S1SvImJ_G0035590.1 mouse_genomes_project X 15306898 15410539 + MGP_129S1SvImJ_P0095744 Jade3 protein_coding protein_coding MGP_129S1SvImJ_T0095745.1 MGP_129S1SvImJ_G0035590.1 mouse_genomes_project X 15306998 15383925 + Jade3 protein_coding retained_intron MGP_129S1SvImJ_T0095746.1 MGP_129S1SvImJ_G0035590.1 mouse_genomes_project X 15307005 15410545 + MGP_129S1SvImJ_P0095746 Jade3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0095747.1 MGP_129S1SvImJ_G0035590.1 mouse_genomes_project X 15344020 15408496 + MGP_129S1SvImJ_P0095747 Jade3 protein_coding protein_coding MGP_129S1SvImJ_T0096735.1 MGP_129S1SvImJ_G0035872.1 mouse_genomes_project X 73695968 73701286 + MGP_129S1SvImJ_P0096735 protein_coding protein_coding MGP_129S1SvImJ_T0097822.1 MGP_129S1SvImJ_G0036183.1 mouse_genomes_project X 149903675 149984692 + MGP_129S1SvImJ_P0097822 Iqsec2 protein_coding protein_coding MGP_129S1SvImJ_T0097823.1 MGP_129S1SvImJ_G0036183.1 mouse_genomes_project X 149903679 149984693 + MGP_129S1SvImJ_P0097823 Iqsec2 protein_coding protein_coding MGP_129S1SvImJ_T0097824.1 MGP_129S1SvImJ_G0036183.1 mouse_genomes_project X 149903880 149953949 + MGP_129S1SvImJ_P0097824 Iqsec2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0097825.1 MGP_129S1SvImJ_G0036183.1 mouse_genomes_project X 149938350 149963341 + Iqsec2 protein_coding processed_transcript MGP_129S1SvImJ_T0097826.1 MGP_129S1SvImJ_G0036183.1 mouse_genomes_project X 149938350 149953938 + Iqsec2 protein_coding processed_transcript MGP_129S1SvImJ_T0097827.1 MGP_129S1SvImJ_G0036183.1 mouse_genomes_project X 149938350 149953938 + Iqsec2 protein_coding processed_transcript MGP_129S1SvImJ_T0097828.1 MGP_129S1SvImJ_G0036183.1 mouse_genomes_project X 149962347 149983344 + MGP_129S1SvImJ_P0097828 Iqsec2 protein_coding protein_coding MGP_129S1SvImJ_T0016266.1 MGP_129S1SvImJ_G0014355.1 mouse_genomes_project X 18281975 18282425 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097477.1 MGP_129S1SvImJ_G0036101.1 mouse_genomes_project X 133990801 134047066 + protein_coding processed_transcript MGP_129S1SvImJ_T0097478.1 MGP_129S1SvImJ_G0036101.1 mouse_genomes_project X 133990808 134047629 + protein_coding processed_transcript MGP_129S1SvImJ_T0096235.1 MGP_129S1SvImJ_G0035765.1 mouse_genomes_project X 59671866 59677097 + MGP_129S1SvImJ_P0096235 3830417A13Rik protein_coding protein_coding MGP_129S1SvImJ_T0096236.1 MGP_129S1SvImJ_G0035765.1 mouse_genomes_project X 59672666 59675826 + MGP_129S1SvImJ_P0096236 3830417A13Rik protein_coding protein_coding MGP_129S1SvImJ_T0005639.1 MGP_129S1SvImJ_G0004752.1 mouse_genomes_project X 165540687 165543638 + Gm15239 antisense antisense MGP_129S1SvImJ_T0016786.1 MGP_129S1SvImJ_G0014875.1 mouse_genomes_project X 139362017 139362290 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016739.1 MGP_129S1SvImJ_G0014828.1 mouse_genomes_project X 131947048 131948708 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097413.1 MGP_129S1SvImJ_G0036078.1 mouse_genomes_project X 132000907 132004286 - MGP_129S1SvImJ_P0097413 Armcx2 protein_coding protein_coding MGP_129S1SvImJ_T0097414.1 MGP_129S1SvImJ_G0036078.1 mouse_genomes_project X 132000909 132005981 - MGP_129S1SvImJ_P0097414 Armcx2 protein_coding protein_coding MGP_129S1SvImJ_T0097415.1 MGP_129S1SvImJ_G0036078.1 mouse_genomes_project X 132000909 132005756 - MGP_129S1SvImJ_P0097415 Armcx2 protein_coding protein_coding MGP_129S1SvImJ_T0097416.1 MGP_129S1SvImJ_G0036078.1 mouse_genomes_project X 132000909 132005981 - MGP_129S1SvImJ_P0097416 Armcx2 protein_coding protein_coding MGP_129S1SvImJ_T0097417.1 MGP_129S1SvImJ_G0036078.1 mouse_genomes_project X 132003247 132004272 - Armcx2 protein_coding processed_transcript MGP_129S1SvImJ_T0097418.1 MGP_129S1SvImJ_G0036078.1 mouse_genomes_project X 132004022 132004703 - Armcx2 protein_coding processed_transcript MGP_129S1SvImJ_T0097419.1 MGP_129S1SvImJ_G0036078.1 mouse_genomes_project X 132004647 132005721 - Armcx2 protein_coding processed_transcript MGP_129S1SvImJ_T0098678.1 MGP_129S1SvImJ_G0036763.1 mouse_genomes_project X 13214075 13214194 - n-R5s5 rRNA rRNA MGP_129S1SvImJ_T0016516.1 MGP_129S1SvImJ_G0014605.1 mouse_genomes_project X 88200350 88200545 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097068.1 MGP_129S1SvImJ_G0035964.1 mouse_genomes_project X 98168927 98217321 + MGP_129S1SvImJ_P0097068 Ogt protein_coding protein_coding MGP_129S1SvImJ_T0097069.1 MGP_129S1SvImJ_G0035964.1 mouse_genomes_project X 98168929 98182159 + Ogt protein_coding retained_intron MGP_129S1SvImJ_T0097070.1 MGP_129S1SvImJ_G0035964.1 mouse_genomes_project X 98168931 98218732 + MGP_129S1SvImJ_P0097070 Ogt protein_coding protein_coding MGP_129S1SvImJ_T0097071.1 MGP_129S1SvImJ_G0035964.1 mouse_genomes_project X 98168961 98183600 + Ogt protein_coding processed_transcript MGP_129S1SvImJ_T0097072.1 MGP_129S1SvImJ_G0035964.1 mouse_genomes_project X 98168975 98183868 + Ogt protein_coding retained_intron MGP_129S1SvImJ_T0097073.1 MGP_129S1SvImJ_G0035964.1 mouse_genomes_project X 98169007 98182176 + Ogt protein_coding retained_intron MGP_129S1SvImJ_T0097074.1 MGP_129S1SvImJ_G0035964.1 mouse_genomes_project X 98184626 98217539 + Ogt protein_coding processed_transcript MGP_129S1SvImJ_T0096391.1 MGP_129S1SvImJ_G0035818.1 mouse_genomes_project X 69531810 69547804 + Plxnb3 protein_coding retained_intron MGP_129S1SvImJ_T0096392.1 MGP_129S1SvImJ_G0035818.1 mouse_genomes_project X 69531810 69547804 + Plxnb3 protein_coding retained_intron MGP_129S1SvImJ_T0096393.1 MGP_129S1SvImJ_G0035818.1 mouse_genomes_project X 69531810 69547804 + Plxnb3 protein_coding retained_intron MGP_129S1SvImJ_T0096394.1 MGP_129S1SvImJ_G0035818.1 mouse_genomes_project X 69531819 69547804 + MGP_129S1SvImJ_P0096394 Plxnb3 protein_coding protein_coding MGP_129S1SvImJ_T0096395.1 MGP_129S1SvImJ_G0035818.1 mouse_genomes_project X 69540821 69544955 + Plxnb3 protein_coding retained_intron MGP_129S1SvImJ_T0016808.1 MGP_129S1SvImJ_G0014897.1 mouse_genomes_project X 142058408 142059774 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097333.1 MGP_129S1SvImJ_G0036055.1 mouse_genomes_project X 130876197 130876388 - MGP_129S1SvImJ_P0097333 protein_coding protein_coding MGP_129S1SvImJ_T0011152.1 MGP_129S1SvImJ_G0009268.1 mouse_genomes_project X 33156620 33156700 + Mir3110 miRNA miRNA MGP_129S1SvImJ_T0096912.1 MGP_129S1SvImJ_G0035929.1 mouse_genomes_project X 93469888 93479373 + MGP_129S1SvImJ_P0096912 Pgr15l protein_coding protein_coding MGP_129S1SvImJ_T0096058.1 MGP_129S1SvImJ_G0035696.1 mouse_genomes_project X 43794496 43802119 + Slc25a14 protein_coding processed_transcript MGP_129S1SvImJ_T0096059.1 MGP_129S1SvImJ_G0035696.1 mouse_genomes_project X 43794661 43847577 + MGP_129S1SvImJ_P0096059 Slc25a14 protein_coding protein_coding MGP_129S1SvImJ_T0096060.1 MGP_129S1SvImJ_G0035696.1 mouse_genomes_project X 43794661 43847577 + MGP_129S1SvImJ_P0096060 Slc25a14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096061.1 MGP_129S1SvImJ_G0035696.1 mouse_genomes_project X 43794661 43847577 + MGP_129S1SvImJ_P0096061 Slc25a14 protein_coding protein_coding MGP_129S1SvImJ_T0096062.1 MGP_129S1SvImJ_G0035696.1 mouse_genomes_project X 43794832 43825010 + Slc25a14 protein_coding processed_transcript MGP_129S1SvImJ_T0096063.1 MGP_129S1SvImJ_G0035696.1 mouse_genomes_project X 43794848 43847577 + MGP_129S1SvImJ_P0096063 Slc25a14 protein_coding protein_coding MGP_129S1SvImJ_T0096064.1 MGP_129S1SvImJ_G0035696.1 mouse_genomes_project X 43794903 43806320 + Slc25a14 protein_coding retained_intron MGP_129S1SvImJ_T0096065.1 MGP_129S1SvImJ_G0035696.1 mouse_genomes_project X 43795045 43847575 + MGP_129S1SvImJ_P0096065 Slc25a14 protein_coding protein_coding MGP_129S1SvImJ_T0100250.1 MGP_129S1SvImJ_G0038317.1 mouse_genomes_project X 57354349 57354456 + Gm25412 snRNA snRNA MGP_129S1SvImJ_T0016629.1 MGP_129S1SvImJ_G0014718.1 mouse_genomes_project X 104074125 104074596 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016848.1 MGP_129S1SvImJ_G0014937.1 mouse_genomes_project X 151221096 151222077 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016183.1 MGP_129S1SvImJ_G0014272.1 mouse_genomes_project X 589230 589470 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016763.1 MGP_129S1SvImJ_G0014852.1 mouse_genomes_project X 134633682 134635651 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097149.1 MGP_129S1SvImJ_G0035997.1 mouse_genomes_project X 102286640 102287508 + MGP_129S1SvImJ_P0097149 Cypt2 protein_coding protein_coding MGP_129S1SvImJ_T0016262.1 MGP_129S1SvImJ_G0014351.1 mouse_genomes_project X 17129428 17131397 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096743.1 MGP_129S1SvImJ_G0035879.1 mouse_genomes_project X 74320635 74461301 - MGP_129S1SvImJ_P0096743 Prrg1 protein_coding protein_coding MGP_129S1SvImJ_T0096744.1 MGP_129S1SvImJ_G0035879.1 mouse_genomes_project X 74320635 74461410 - MGP_129S1SvImJ_P0096744 Prrg1 protein_coding protein_coding MGP_129S1SvImJ_T0096745.1 MGP_129S1SvImJ_G0035879.1 mouse_genomes_project X 74320635 74461415 - MGP_129S1SvImJ_P0096745 Prrg1 protein_coding protein_coding MGP_129S1SvImJ_T0096746.1 MGP_129S1SvImJ_G0035879.1 mouse_genomes_project X 74343436 74461374 - Prrg1 protein_coding processed_transcript MGP_129S1SvImJ_T0096747.1 MGP_129S1SvImJ_G0035879.1 mouse_genomes_project X 74357478 74461301 - Prrg1 protein_coding retained_intron MGP_129S1SvImJ_T0096748.1 MGP_129S1SvImJ_G0035879.1 mouse_genomes_project X 74357495 74461415 - Prrg1 protein_coding retained_intron MGP_129S1SvImJ_T0096749.1 MGP_129S1SvImJ_G0035879.1 mouse_genomes_project X 74360571 74461413 - MGP_129S1SvImJ_P0096749 Prrg1 protein_coding protein_coding MGP_129S1SvImJ_T0096750.1 MGP_129S1SvImJ_G0035879.1 mouse_genomes_project X 74392738 74461410 - Prrg1 protein_coding retained_intron MGP_129S1SvImJ_T0096751.1 MGP_129S1SvImJ_G0035879.1 mouse_genomes_project X 74395771 74461409 - Prrg1 protein_coding retained_intron MGP_129S1SvImJ_T0096752.1 MGP_129S1SvImJ_G0035879.1 mouse_genomes_project X 74396237 74461371 - Prrg1 protein_coding processed_transcript MGP_129S1SvImJ_T0016437.1 MGP_129S1SvImJ_G0014526.1 mouse_genomes_project X 71773456 71774768 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100231.1 MGP_129S1SvImJ_G0038298.1 mouse_genomes_project X 15499411 15499584 - Gm23628 snRNA snRNA MGP_129S1SvImJ_T0016651.1 MGP_129S1SvImJ_G0014740.1 mouse_genomes_project X 109421141 109422049 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016901.1 MGP_129S1SvImJ_G0014990.1 mouse_genomes_project X 160871432 160872118 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016829.1 MGP_129S1SvImJ_G0014918.1 mouse_genomes_project X 148095855 148096059 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016542.1 MGP_129S1SvImJ_G0014631.1 mouse_genomes_project X 91574633 91576636 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097111.1 MGP_129S1SvImJ_G0035975.1 mouse_genomes_project X 99302134 99302982 - MGP_129S1SvImJ_P0097111 Gm9112 protein_coding protein_coding MGP_129S1SvImJ_T0096240.1 MGP_129S1SvImJ_G0035767.1 mouse_genomes_project X 60588432 60592578 + MGP_129S1SvImJ_P0096240 Ctag2 protein_coding protein_coding MGP_129S1SvImJ_T0096340.1 MGP_129S1SvImJ_G0035798.1 mouse_genomes_project X 68730940 68735034 - MGP_129S1SvImJ_P0096340 Pnma5 protein_coding protein_coding MGP_129S1SvImJ_T0096341.1 MGP_129S1SvImJ_G0035798.1 mouse_genomes_project X 68730947 68734034 - MGP_129S1SvImJ_P0096341 Pnma5 protein_coding protein_coding MGP_129S1SvImJ_T0096342.1 MGP_129S1SvImJ_G0035798.1 mouse_genomes_project X 68731278 68735034 - MGP_129S1SvImJ_P0096342 Pnma5 protein_coding protein_coding MGP_129S1SvImJ_T0016744.1 MGP_129S1SvImJ_G0014833.1 mouse_genomes_project X 132482833 132483579 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102880.1 MGP_129S1SvImJ_G0040712.1 mouse_genomes_project X 149867294 149869269 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0016834.1 MGP_129S1SvImJ_G0014923.1 mouse_genomes_project X 148646871 148648411 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016893.1 MGP_129S1SvImJ_G0014982.1 mouse_genomes_project X 158641393 158641676 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097711.1 MGP_129S1SvImJ_G0036168.1 mouse_genomes_project X 148249692 148322724 - MGP_129S1SvImJ_P0097711 Apex2 protein_coding protein_coding MGP_129S1SvImJ_T0097712.1 MGP_129S1SvImJ_G0036168.1 mouse_genomes_project X 148250525 148320962 - MGP_129S1SvImJ_P0097712 Apex2 protein_coding protein_coding MGP_129S1SvImJ_T0097717.1 MGP_129S1SvImJ_G0036168.1 mouse_genomes_project X 148300625 148320965 - Apex2 protein_coding retained_intron MGP_129S1SvImJ_T0097718.1 MGP_129S1SvImJ_G0036168.1 mouse_genomes_project X 148300626 148322748 - Apex2 protein_coding processed_transcript MGP_129S1SvImJ_T0097719.1 MGP_129S1SvImJ_G0036168.1 mouse_genomes_project X 148300626 148320976 - MGP_129S1SvImJ_P0097719 Apex2 protein_coding protein_coding MGP_129S1SvImJ_T0097720.1 MGP_129S1SvImJ_G0036168.1 mouse_genomes_project X 148300886 148324057 - MGP_129S1SvImJ_P0097720 Apex2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0097721.1 MGP_129S1SvImJ_G0036168.1 mouse_genomes_project X 148301577 148316156 - Apex2 protein_coding processed_transcript MGP_129S1SvImJ_T0097722.1 MGP_129S1SvImJ_G0036168.1 mouse_genomes_project X 148301667 148320951 - MGP_129S1SvImJ_P0097722 Apex2 protein_coding protein_coding MGP_129S1SvImJ_T0097723.1 MGP_129S1SvImJ_G0036168.1 mouse_genomes_project X 148314085 148320961 - MGP_129S1SvImJ_P0097723 Apex2 protein_coding protein_coding MGP_129S1SvImJ_T0016535.1 MGP_129S1SvImJ_G0014624.1 mouse_genomes_project X 91030948 91031426 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100275.1 MGP_129S1SvImJ_G0038342.1 mouse_genomes_project X 112184870 112184994 - Gm25366 snRNA snRNA MGP_129S1SvImJ_T0016485.1 MGP_129S1SvImJ_G0014574.1 mouse_genomes_project X 82924219 82924529 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016336.1 MGP_129S1SvImJ_G0014425.1 mouse_genomes_project X 48099417 48100815 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097842.1 MGP_129S1SvImJ_G0036187.1 mouse_genomes_project X 150356413 150357049 + MGP_129S1SvImJ_P0097842 Cldn34a protein_coding protein_coding MGP_129S1SvImJ_T0096388.1 MGP_129S1SvImJ_G0035816.1 mouse_genomes_project X 69456122 69490650 - MGP_129S1SvImJ_P0096388 Bcap31 protein_coding protein_coding MGP_129S1SvImJ_T0016917.1 MGP_129S1SvImJ_G0015006.1 mouse_genomes_project X 164611986 164612812 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016558.1 MGP_129S1SvImJ_G0014647.1 mouse_genomes_project X 94934183 94934669 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011208.1 MGP_129S1SvImJ_G0009324.1 mouse_genomes_project X 74792771 74792863 - Gm23556 miRNA miRNA MGP_129S1SvImJ_T0100257.1 MGP_129S1SvImJ_G0038324.1 mouse_genomes_project X 78106937 78107037 + Gm22686 snRNA snRNA MGP_129S1SvImJ_T0016609.1 MGP_129S1SvImJ_G0014698.1 mouse_genomes_project X 101691730 101692249 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016855.1 MGP_129S1SvImJ_G0014944.1 mouse_genomes_project X 153032819 153033179 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097464.1 MGP_129S1SvImJ_G0036096.1 mouse_genomes_project X 133585135 133596797 + MGP_129S1SvImJ_P0097464 Tceal7 protein_coding protein_coding MGP_129S1SvImJ_T0097465.1 MGP_129S1SvImJ_G0036096.1 mouse_genomes_project X 133595450 133597510 + MGP_129S1SvImJ_P0097465 Tceal7 protein_coding protein_coding MGP_129S1SvImJ_T0098139.1 MGP_129S1SvImJ_G0036271.1 mouse_genomes_project X 165479181 165506370 - MGP_129S1SvImJ_P0098139 Tlr7 protein_coding protein_coding MGP_129S1SvImJ_T0098140.1 MGP_129S1SvImJ_G0036271.1 mouse_genomes_project X 165479183 165506400 - MGP_129S1SvImJ_P0098140 Tlr7 protein_coding protein_coding MGP_129S1SvImJ_T0098141.1 MGP_129S1SvImJ_G0036271.1 mouse_genomes_project X 165479466 165506339 - MGP_129S1SvImJ_P0098141 Tlr7 protein_coding protein_coding MGP_129S1SvImJ_T0098142.1 MGP_129S1SvImJ_G0036271.1 mouse_genomes_project X 165482594 165506333 - MGP_129S1SvImJ_P0098142 Tlr7 protein_coding protein_coding MGP_129S1SvImJ_T0098143.1 MGP_129S1SvImJ_G0036271.1 mouse_genomes_project X 165482608 165506352 - MGP_129S1SvImJ_P0098143 Tlr7 protein_coding protein_coding MGP_129S1SvImJ_T0098144.1 MGP_129S1SvImJ_G0036271.1 mouse_genomes_project X 165493514 165506285 - Tlr7 protein_coding processed_transcript MGP_129S1SvImJ_T0100255.1 MGP_129S1SvImJ_G0038322.1 mouse_genomes_project X 71430205 71430369 - Gm25421 snRNA snRNA MGP_129S1SvImJ_T0102865.1 MGP_129S1SvImJ_G0040697.1 mouse_genomes_project X 85512492 85513546 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0101813.1 MGP_129S1SvImJ_G0039775.1 mouse_genomes_project X 127622497 127623206 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0097919.1 MGP_129S1SvImJ_G0036220.1 mouse_genomes_project X 155586137 155638220 + MGP_129S1SvImJ_P0097919 Smpx protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097920.1 MGP_129S1SvImJ_G0036220.1 mouse_genomes_project X 155586137 155590240 + MGP_129S1SvImJ_P0097920 Smpx protein_coding protein_coding MGP_129S1SvImJ_T0097921.1 MGP_129S1SvImJ_G0036220.1 mouse_genomes_project X 155586200 155638218 + MGP_129S1SvImJ_P0097921 Smpx protein_coding protein_coding MGP_129S1SvImJ_T0097922.1 MGP_129S1SvImJ_G0036220.1 mouse_genomes_project X 155586354 155638218 + MGP_129S1SvImJ_P0097922 Smpx protein_coding protein_coding MGP_129S1SvImJ_T0097923.1 MGP_129S1SvImJ_G0036220.1 mouse_genomes_project X 155586487 155637843 + MGP_129S1SvImJ_P0097923 Smpx protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097924.1 MGP_129S1SvImJ_G0036220.1 mouse_genomes_project X 155589825 155637870 + MGP_129S1SvImJ_P0097924 Smpx protein_coding protein_coding MGP_129S1SvImJ_T0097925.1 MGP_129S1SvImJ_G0036220.1 mouse_genomes_project X 155601500 155637840 + Smpx protein_coding retained_intron MGP_129S1SvImJ_T0097926.1 MGP_129S1SvImJ_G0036220.1 mouse_genomes_project X 155607639 155637912 + Smpx protein_coding retained_intron MGP_129S1SvImJ_T0016658.1 MGP_129S1SvImJ_G0014747.1 mouse_genomes_project X 109990403 109992183 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016348.1 MGP_129S1SvImJ_G0014437.1 mouse_genomes_project X 53090906 53091492 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016429.1 MGP_129S1SvImJ_G0014518.1 mouse_genomes_project X 70377503 70378252 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100252.1 MGP_129S1SvImJ_G0038319.1 mouse_genomes_project X 62306047 62306186 + Gm23000 snRNA snRNA MGP_129S1SvImJ_T0102853.1 MGP_129S1SvImJ_G0040685.1 mouse_genomes_project X 68986234 68995676 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0096097.1 MGP_129S1SvImJ_G0035710.1 mouse_genomes_project X 46155220 46169311 - MGP_129S1SvImJ_P0096097 Rap2c protein_coding protein_coding MGP_129S1SvImJ_T0100239.1 MGP_129S1SvImJ_G0038306.1 mouse_genomes_project X 38323756 38323946 + Gm24763 snRNA snRNA MGP_129S1SvImJ_T0016731.1 MGP_129S1SvImJ_G0014820.1 mouse_genomes_project X 130166772 130167560 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102870.1 MGP_129S1SvImJ_G0040702.1 mouse_genomes_project X 99383559 99387083 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0016561.1 MGP_129S1SvImJ_G0014650.1 mouse_genomes_project X 96130657 96130951 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016285.1 MGP_129S1SvImJ_G0014374.1 mouse_genomes_project X 34755880 34756271 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096194.1 MGP_129S1SvImJ_G0035748.1 mouse_genomes_project X 52717591 52727048 - MGP_129S1SvImJ_P0096194 Rbmx protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096195.1 MGP_129S1SvImJ_G0035748.1 mouse_genomes_project X 52720091 52727103 - MGP_129S1SvImJ_P0096195 Rbmx protein_coding protein_coding MGP_129S1SvImJ_T0096196.1 MGP_129S1SvImJ_G0035748.1 mouse_genomes_project X 52721144 52727026 - MGP_129S1SvImJ_P0096196 Rbmx protein_coding protein_coding MGP_129S1SvImJ_T0096197.1 MGP_129S1SvImJ_G0035748.1 mouse_genomes_project X 52724209 52726864 - MGP_129S1SvImJ_P0096197 Rbmx protein_coding protein_coding MGP_129S1SvImJ_T0096088.1 MGP_129S1SvImJ_G0035706.1 mouse_genomes_project X 45158432 45159362 - MGP_129S1SvImJ_P0096088 Olfr1323 protein_coding protein_coding MGP_129S1SvImJ_T0097130.1 MGP_129S1SvImJ_G0035987.1 mouse_genomes_project X 100375925 100506293 - MGP_129S1SvImJ_P0097130 Slc16a2 protein_coding protein_coding MGP_129S1SvImJ_T0097131.1 MGP_129S1SvImJ_G0035987.1 mouse_genomes_project X 100378379 100384983 - Slc16a2 protein_coding retained_intron MGP_129S1SvImJ_T0097132.1 MGP_129S1SvImJ_G0035987.1 mouse_genomes_project X 100384912 100413462 - Slc16a2 protein_coding processed_transcript MGP_129S1SvImJ_T0100284.1 MGP_129S1SvImJ_G0038351.1 mouse_genomes_project X 135870485 135870590 - Gm23958 snRNA snRNA MGP_129S1SvImJ_T0097763.1 MGP_129S1SvImJ_G0036175.1 mouse_genomes_project X 148819093 148828475 - MGP_129S1SvImJ_P0097763 Tsr2 protein_coding protein_coding MGP_129S1SvImJ_T0097764.1 MGP_129S1SvImJ_G0036175.1 mouse_genomes_project X 148819094 148828475 - MGP_129S1SvImJ_P0097764 Tsr2 protein_coding protein_coding MGP_129S1SvImJ_T0097765.1 MGP_129S1SvImJ_G0036175.1 mouse_genomes_project X 148821480 148828475 - MGP_129S1SvImJ_P0097765 Tsr2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097766.1 MGP_129S1SvImJ_G0036175.1 mouse_genomes_project X 148821691 148828455 - Tsr2 protein_coding processed_transcript MGP_129S1SvImJ_T0016755.1 MGP_129S1SvImJ_G0014844.1 mouse_genomes_project X 134333034 134334156 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097310.1 MGP_129S1SvImJ_G0036046.1 mouse_genomes_project X 117191029 117191597 - MGP_129S1SvImJ_P0097310 Gm14920 protein_coding protein_coding MGP_129S1SvImJ_T0016223.1 MGP_129S1SvImJ_G0014312.1 mouse_genomes_project X 7756714 7757397 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097075.1 MGP_129S1SvImJ_G0035965.1 mouse_genomes_project X 98273824 98276556 - MGP_129S1SvImJ_P0097075 Cxcr3 protein_coding protein_coding MGP_129S1SvImJ_T0009368.1 MGP_129S1SvImJ_G0007525.1 mouse_genomes_project X 5459689 5469634 - Gm10489 lincRNA lincRNA MGP_129S1SvImJ_T0016492.1 MGP_129S1SvImJ_G0014581.1 mouse_genomes_project X 84834711 84835182 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016815.1 MGP_129S1SvImJ_G0014904.1 mouse_genomes_project X 143212431 143213379 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016818.1 MGP_129S1SvImJ_G0014907.1 mouse_genomes_project X 143550641 143551175 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097335.1 MGP_129S1SvImJ_G0036057.1 mouse_genomes_project X 131036240 131043605 - MGP_129S1SvImJ_P0097335 Tspan6 protein_coding protein_coding MGP_129S1SvImJ_T0097336.1 MGP_129S1SvImJ_G0036057.1 mouse_genomes_project X 131037873 131043470 - MGP_129S1SvImJ_P0097336 Tspan6 protein_coding protein_coding MGP_129S1SvImJ_T0097337.1 MGP_129S1SvImJ_G0036057.1 mouse_genomes_project X 131039692 131043470 - MGP_129S1SvImJ_P0097337 Tspan6 protein_coding protein_coding MGP_129S1SvImJ_T0097338.1 MGP_129S1SvImJ_G0036057.1 mouse_genomes_project X 131041889 131043289 - Tspan6 protein_coding processed_transcript MGP_129S1SvImJ_T0016704.1 MGP_129S1SvImJ_G0014793.1 mouse_genomes_project X 118799698 118800466 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097632.1 MGP_129S1SvImJ_G0036151.1 mouse_genomes_project X 140208042 140368842 + MGP_129S1SvImJ_P0097632 protein_coding protein_coding MGP_129S1SvImJ_T0097633.1 MGP_129S1SvImJ_G0036151.1 mouse_genomes_project X 140210327 140298823 + protein_coding retained_intron MGP_129S1SvImJ_T0097634.1 MGP_129S1SvImJ_G0036151.1 mouse_genomes_project X 140298525 140373964 + MGP_129S1SvImJ_P0097634 protein_coding protein_coding MGP_129S1SvImJ_T0095561.1 MGP_129S1SvImJ_G0035535.1 mouse_genomes_project X 2556585 2576039 - MGP_129S1SvImJ_P0095561 Hdac6 protein_coding protein_coding MGP_129S1SvImJ_T0095562.1 MGP_129S1SvImJ_G0035535.1 mouse_genomes_project X 2556587 2576039 - MGP_129S1SvImJ_P0095562 Hdac6 protein_coding protein_coding MGP_129S1SvImJ_T0095563.1 MGP_129S1SvImJ_G0035535.1 mouse_genomes_project X 2556589 2575988 - Hdac6 protein_coding retained_intron MGP_129S1SvImJ_T0095564.1 MGP_129S1SvImJ_G0035535.1 mouse_genomes_project X 2557824 2576039 - MGP_129S1SvImJ_P0095564 Hdac6 protein_coding protein_coding MGP_129S1SvImJ_T0095565.1 MGP_129S1SvImJ_G0035535.1 mouse_genomes_project X 2558020 2560951 - Hdac6 protein_coding retained_intron MGP_129S1SvImJ_T0095566.1 MGP_129S1SvImJ_G0035535.1 mouse_genomes_project X 2565492 2566843 - Hdac6 protein_coding retained_intron MGP_129S1SvImJ_T0095567.1 MGP_129S1SvImJ_G0035535.1 mouse_genomes_project X 2565599 2568135 - Hdac6 protein_coding retained_intron MGP_129S1SvImJ_T0095568.1 MGP_129S1SvImJ_G0035535.1 mouse_genomes_project X 2571555 2575309 - Hdac6 protein_coding retained_intron MGP_129S1SvImJ_T0095569.1 MGP_129S1SvImJ_G0035535.1 mouse_genomes_project X 2571579 2575703 - MGP_129S1SvImJ_P0095569 Hdac6 protein_coding protein_coding MGP_129S1SvImJ_T0095570.1 MGP_129S1SvImJ_G0035535.1 mouse_genomes_project X 2575138 2575917 - MGP_129S1SvImJ_P0095570 Hdac6 protein_coding protein_coding MGP_129S1SvImJ_T0101527.1 MGP_129S1SvImJ_G0039594.1 mouse_genomes_project X 89525974 89526057 + Gm24123 snoRNA snoRNA MGP_129S1SvImJ_T0016294.1 MGP_129S1SvImJ_G0014383.1 mouse_genomes_project X 36279813 36281315 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096020.1 MGP_129S1SvImJ_G0035686.1 mouse_genomes_project X 43149087 43159802 - MGP_129S1SvImJ_P0096020 Apln protein_coding protein_coding MGP_129S1SvImJ_T0016627.1 MGP_129S1SvImJ_G0014716.1 mouse_genomes_project X 103629957 103630249 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095758.1 MGP_129S1SvImJ_G0035594.1 mouse_genomes_project X 15546476 15570585 + MGP_129S1SvImJ_P0095758 Uba1 protein_coding protein_coding MGP_129S1SvImJ_T0095759.1 MGP_129S1SvImJ_G0035594.1 mouse_genomes_project X 15546571 15557675 + Uba1 protein_coding processed_transcript MGP_129S1SvImJ_T0095760.1 MGP_129S1SvImJ_G0035594.1 mouse_genomes_project X 15547577 15556589 + Uba1 protein_coding processed_transcript MGP_129S1SvImJ_T0095761.1 MGP_129S1SvImJ_G0035594.1 mouse_genomes_project X 15550269 15570585 + MGP_129S1SvImJ_P0095761 Uba1 protein_coding protein_coding MGP_129S1SvImJ_T0095762.1 MGP_129S1SvImJ_G0035594.1 mouse_genomes_project X 15565448 15568606 + Uba1 protein_coding processed_transcript MGP_129S1SvImJ_T0095763.1 MGP_129S1SvImJ_G0035594.1 mouse_genomes_project X 15568000 15569611 + Uba1 protein_coding processed_transcript MGP_129S1SvImJ_T0016885.1 MGP_129S1SvImJ_G0014974.1 mouse_genomes_project X 157305786 157306050 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096245.1 MGP_129S1SvImJ_G0035771.1 mouse_genomes_project X 63524550 63526137 - MGP_129S1SvImJ_P0096245 4933436I01Rik protein_coding protein_coding MGP_129S1SvImJ_T0095980.1 MGP_129S1SvImJ_G0035675.1 mouse_genomes_project X 37216896 37347710 + MGP_129S1SvImJ_P0095980 Stag2 protein_coding protein_coding MGP_129S1SvImJ_T0095981.1 MGP_129S1SvImJ_G0035675.1 mouse_genomes_project X 37216997 37345821 + MGP_129S1SvImJ_P0095981 Stag2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0095982.1 MGP_129S1SvImJ_G0035675.1 mouse_genomes_project X 37217025 37282609 + Stag2 protein_coding retained_intron MGP_129S1SvImJ_T0095983.1 MGP_129S1SvImJ_G0035675.1 mouse_genomes_project X 37217167 37276061 + MGP_129S1SvImJ_P0095983 Stag2 protein_coding protein_coding MGP_129S1SvImJ_T0095984.1 MGP_129S1SvImJ_G0035675.1 mouse_genomes_project X 37217638 37281348 + Stag2 protein_coding processed_transcript MGP_129S1SvImJ_T0095985.1 MGP_129S1SvImJ_G0035675.1 mouse_genomes_project X 37218809 37347720 + MGP_129S1SvImJ_P0095985 Stag2 protein_coding protein_coding MGP_129S1SvImJ_T0095986.1 MGP_129S1SvImJ_G0035675.1 mouse_genomes_project X 37219122 37276064 + MGP_129S1SvImJ_P0095986 Stag2 protein_coding protein_coding MGP_129S1SvImJ_T0095987.1 MGP_129S1SvImJ_G0035675.1 mouse_genomes_project X 37220288 37290958 + MGP_129S1SvImJ_P0095987 Stag2 protein_coding protein_coding MGP_129S1SvImJ_T0098023.1 MGP_129S1SvImJ_G0036241.1 mouse_genomes_project X 160795738 160834673 - protein_coding retained_intron MGP_129S1SvImJ_T0098024.1 MGP_129S1SvImJ_G0036241.1 mouse_genomes_project X 160795738 160855558 - MGP_129S1SvImJ_P0098024 protein_coding protein_coding MGP_129S1SvImJ_T0098025.1 MGP_129S1SvImJ_G0036241.1 mouse_genomes_project X 160795738 160855558 - MGP_129S1SvImJ_P0098025 protein_coding protein_coding MGP_129S1SvImJ_T0098026.1 MGP_129S1SvImJ_G0036241.1 mouse_genomes_project X 160806656 160834719 - MGP_129S1SvImJ_P0098026 protein_coding protein_coding MGP_129S1SvImJ_T0098027.1 MGP_129S1SvImJ_G0036241.1 mouse_genomes_project X 160806657 160855558 - MGP_129S1SvImJ_P0098027 protein_coding protein_coding MGP_129S1SvImJ_T0098028.1 MGP_129S1SvImJ_G0036241.1 mouse_genomes_project X 160854163 160855558 - protein_coding processed_transcript MGP_129S1SvImJ_T0016408.1 MGP_129S1SvImJ_G0014497.1 mouse_genomes_project X 66041098 66042639 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016205.1 MGP_129S1SvImJ_G0014294.1 mouse_genomes_project X 3622079 3622878 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009402.1 MGP_129S1SvImJ_G0007550.1 mouse_genomes_project X 93365699 93366522 - 1700003E24Rik lincRNA lincRNA MGP_129S1SvImJ_T0102872.1 MGP_129S1SvImJ_G0040704.1 mouse_genomes_project X 99544184 99544922 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0096028.1 MGP_129S1SvImJ_G0035689.1 mouse_genomes_project X 43305405 43343845 - MGP_129S1SvImJ_P0096028 Zdhhc9 protein_coding protein_coding MGP_129S1SvImJ_T0096029.1 MGP_129S1SvImJ_G0035689.1 mouse_genomes_project X 43305405 43343654 - MGP_129S1SvImJ_P0096029 Zdhhc9 protein_coding protein_coding MGP_129S1SvImJ_T0096030.1 MGP_129S1SvImJ_G0035689.1 mouse_genomes_project X 43316089 43343632 - Zdhhc9 protein_coding retained_intron MGP_129S1SvImJ_T0096031.1 MGP_129S1SvImJ_G0035689.1 mouse_genomes_project X 43325002 43343569 - Zdhhc9 protein_coding retained_intron MGP_129S1SvImJ_T0096032.1 MGP_129S1SvImJ_G0035689.1 mouse_genomes_project X 43336688 43343295 - Zdhhc9 protein_coding processed_transcript MGP_129S1SvImJ_T0096033.1 MGP_129S1SvImJ_G0035689.1 mouse_genomes_project X 43341634 43343625 - Zdhhc9 protein_coding processed_transcript MGP_129S1SvImJ_T0095807.1 MGP_129S1SvImJ_G0035605.1 mouse_genomes_project X 15985755 15995688 - MGP_129S1SvImJ_P0095807 Zfp300 protein_coding protein_coding MGP_129S1SvImJ_T0095808.1 MGP_129S1SvImJ_G0035605.1 mouse_genomes_project X 15988044 15995704 - MGP_129S1SvImJ_P0095808 Zfp300 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0095809.1 MGP_129S1SvImJ_G0035605.1 mouse_genomes_project X 15990400 15995445 - Zfp300 protein_coding retained_intron MGP_129S1SvImJ_T0095810.1 MGP_129S1SvImJ_G0035605.1 mouse_genomes_project X 15990708 15995986 - Zfp300 protein_coding processed_transcript MGP_129S1SvImJ_T0016356.1 MGP_129S1SvImJ_G0014445.1 mouse_genomes_project X 55220251 55221308 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016481.1 MGP_129S1SvImJ_G0014570.1 mouse_genomes_project X 81883869 81884282 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016425.1 MGP_129S1SvImJ_G0014514.1 mouse_genomes_project X 70299304 70300137 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096781.1 MGP_129S1SvImJ_G0035887.1 mouse_genomes_project X 81316250 81336931 + MGP_129S1SvImJ_P0096781 Fthl17a protein_coding protein_coding MGP_129S1SvImJ_T0016784.1 MGP_129S1SvImJ_G0014873.1 mouse_genomes_project X 139273845 139274328 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098013.1 MGP_129S1SvImJ_G0036239.1 mouse_genomes_project X 160400950 160568127 - MGP_129S1SvImJ_P0098013 Reps2 protein_coding protein_coding MGP_129S1SvImJ_T0098014.1 MGP_129S1SvImJ_G0036239.1 mouse_genomes_project X 160400950 160645747 - MGP_129S1SvImJ_P0098014 Reps2 protein_coding protein_coding MGP_129S1SvImJ_T0098015.1 MGP_129S1SvImJ_G0036239.1 mouse_genomes_project X 160400950 160645795 - MGP_129S1SvImJ_P0098015 Reps2 protein_coding protein_coding MGP_129S1SvImJ_T0098016.1 MGP_129S1SvImJ_G0036239.1 mouse_genomes_project X 160526168 160568225 - Reps2 protein_coding processed_transcript MGP_129S1SvImJ_T0098017.1 MGP_129S1SvImJ_G0036239.1 mouse_genomes_project X 160546806 160553997 - Reps2 protein_coding retained_intron MGP_129S1SvImJ_T0016260.1 MGP_129S1SvImJ_G0014349.1 mouse_genomes_project X 16540226 16540607 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016332.1 MGP_129S1SvImJ_G0014421.1 mouse_genomes_project X 46814645 46814843 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098018.1 MGP_129S1SvImJ_G0036240.1 mouse_genomes_project X 160775711 160795912 + MGP_129S1SvImJ_P0098018 Rbbp7 protein_coding protein_coding MGP_129S1SvImJ_T0098019.1 MGP_129S1SvImJ_G0036240.1 mouse_genomes_project X 160775730 160795576 + MGP_129S1SvImJ_P0098019 Rbbp7 protein_coding protein_coding MGP_129S1SvImJ_T0098020.1 MGP_129S1SvImJ_G0036240.1 mouse_genomes_project X 160775771 160792814 + MGP_129S1SvImJ_P0098020 Rbbp7 protein_coding protein_coding MGP_129S1SvImJ_T0098021.1 MGP_129S1SvImJ_G0036240.1 mouse_genomes_project X 160776376 160789149 + MGP_129S1SvImJ_P0098021 Rbbp7 protein_coding protein_coding MGP_129S1SvImJ_T0098022.1 MGP_129S1SvImJ_G0036240.1 mouse_genomes_project X 160791496 160795265 + MGP_129S1SvImJ_P0098022 Rbbp7 protein_coding protein_coding MGP_129S1SvImJ_T0016449.1 MGP_129S1SvImJ_G0014538.1 mouse_genomes_project X 73577565 73578334 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101512.1 MGP_129S1SvImJ_G0039579.1 mouse_genomes_project X 52725515 52725586 - Snord61 snoRNA snoRNA MGP_129S1SvImJ_T0016783.1 MGP_129S1SvImJ_G0014872.1 mouse_genomes_project X 139171975 139172275 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101516.1 MGP_129S1SvImJ_G0039583.1 mouse_genomes_project X 66320426 66320558 + Gm22785 snoRNA snoRNA MGP_129S1SvImJ_T0098102.1 MGP_129S1SvImJ_G0036262.1 mouse_genomes_project X 163254390 163462378 - MGP_129S1SvImJ_P0098102 Glra2 protein_coding protein_coding MGP_129S1SvImJ_T0101804.1 MGP_129S1SvImJ_G0039769.1 mouse_genomes_project X 90464666 90485840 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101548.1 MGP_129S1SvImJ_G0039615.1 mouse_genomes_project X 140963494 140963623 + Gm23325 snoRNA snoRNA MGP_129S1SvImJ_T0096729.1 MGP_129S1SvImJ_G0035869.1 mouse_genomes_project X 73319664 73479234 + MGP_129S1SvImJ_P0096729 Tbl1x protein_coding protein_coding MGP_129S1SvImJ_T0096730.1 MGP_129S1SvImJ_G0035869.1 mouse_genomes_project X 73319865 73475994 + Tbl1x protein_coding retained_intron MGP_129S1SvImJ_T0095898.1 MGP_129S1SvImJ_G0035647.1 mouse_genomes_project X 32648460 32652605 - MGP_129S1SvImJ_P0095898 Rhox2d protein_coding protein_coding MGP_129S1SvImJ_T0096725.1 MGP_129S1SvImJ_G0035866.1 mouse_genomes_project X 72146986 72150460 + MGP_129S1SvImJ_P0096725 protein_coding protein_coding MGP_129S1SvImJ_T0100256.1 MGP_129S1SvImJ_G0038323.1 mouse_genomes_project X 73394489 73394662 + Gm23121 snRNA snRNA MGP_129S1SvImJ_T0102856.1 MGP_129S1SvImJ_G0040688.1 mouse_genomes_project X 71304265 71332888 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0096337.1 MGP_129S1SvImJ_G0035797.1 mouse_genomes_project X 68683927 68728731 + MGP_129S1SvImJ_P0096337 Zfp185 protein_coding protein_coding MGP_129S1SvImJ_T0096338.1 MGP_129S1SvImJ_G0035797.1 mouse_genomes_project X 68683948 68728731 + MGP_129S1SvImJ_P0096338 Zfp185 protein_coding protein_coding MGP_129S1SvImJ_T0096339.1 MGP_129S1SvImJ_G0035797.1 mouse_genomes_project X 68684841 68693994 + MGP_129S1SvImJ_P0096339 Zfp185 protein_coding protein_coding MGP_129S1SvImJ_T0101523.1 MGP_129S1SvImJ_G0039590.1 mouse_genomes_project X 72678839 72678978 + Gm23280 snoRNA snoRNA MGP_129S1SvImJ_T0097691.1 MGP_129S1SvImJ_G0036165.1 mouse_genomes_project X 145069454 145070631 - MGP_129S1SvImJ_P0097691 Vmn1r41 protein_coding protein_coding MGP_129S1SvImJ_T0096121.1 MGP_129S1SvImJ_G0035720.1 mouse_genomes_project X 48314548 48489215 - MGP_129S1SvImJ_P0096121 Plac1 protein_coding protein_coding MGP_129S1SvImJ_T0096122.1 MGP_129S1SvImJ_G0035720.1 mouse_genomes_project X 48314549 48359871 - MGP_129S1SvImJ_P0096122 Plac1 protein_coding protein_coding MGP_129S1SvImJ_T0096123.1 MGP_129S1SvImJ_G0035720.1 mouse_genomes_project X 48314725 48457633 - MGP_129S1SvImJ_P0096123 Plac1 protein_coding protein_coding MGP_129S1SvImJ_T0095480.1 MGP_129S1SvImJ_G0035520.1 mouse_genomes_project X 2336804 2341125 + MGP_129S1SvImJ_P0095480 Wdr45 protein_coding protein_coding MGP_129S1SvImJ_T0095481.1 MGP_129S1SvImJ_G0035520.1 mouse_genomes_project X 2337051 2343033 + MGP_129S1SvImJ_P0095481 Wdr45 protein_coding protein_coding MGP_129S1SvImJ_T0095482.1 MGP_129S1SvImJ_G0035520.1 mouse_genomes_project X 2337071 2342823 + MGP_129S1SvImJ_P0095482 Wdr45 protein_coding protein_coding MGP_129S1SvImJ_T0095483.1 MGP_129S1SvImJ_G0035520.1 mouse_genomes_project X 2337080 2343034 + MGP_129S1SvImJ_P0095483 Wdr45 protein_coding protein_coding MGP_129S1SvImJ_T0095484.1 MGP_129S1SvImJ_G0035520.1 mouse_genomes_project X 2337081 2343015 + MGP_129S1SvImJ_P0095484 Wdr45 protein_coding protein_coding MGP_129S1SvImJ_T0095485.1 MGP_129S1SvImJ_G0035520.1 mouse_genomes_project X 2337081 2341125 + MGP_129S1SvImJ_P0095485 Wdr45 protein_coding protein_coding MGP_129S1SvImJ_T0095486.1 MGP_129S1SvImJ_G0035520.1 mouse_genomes_project X 2337091 2342783 + MGP_129S1SvImJ_P0095486 Wdr45 protein_coding protein_coding MGP_129S1SvImJ_T0095487.1 MGP_129S1SvImJ_G0035520.1 mouse_genomes_project X 2337186 2339124 + MGP_129S1SvImJ_P0095487 Wdr45 protein_coding protein_coding MGP_129S1SvImJ_T0095488.1 MGP_129S1SvImJ_G0035520.1 mouse_genomes_project X 2337188 2341109 + MGP_129S1SvImJ_P0095488 Wdr45 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095489.1 MGP_129S1SvImJ_G0035520.1 mouse_genomes_project X 2337193 2341124 + MGP_129S1SvImJ_P0095489 Wdr45 protein_coding protein_coding MGP_129S1SvImJ_T0095490.1 MGP_129S1SvImJ_G0035520.1 mouse_genomes_project X 2337564 2341165 + Wdr45 protein_coding processed_transcript MGP_129S1SvImJ_T0095491.1 MGP_129S1SvImJ_G0035520.1 mouse_genomes_project X 2337758 2342836 + MGP_129S1SvImJ_P0095491 Wdr45 protein_coding protein_coding MGP_129S1SvImJ_T0095492.1 MGP_129S1SvImJ_G0035520.1 mouse_genomes_project X 2338163 2340860 + MGP_129S1SvImJ_P0095492 Wdr45 protein_coding protein_coding MGP_129S1SvImJ_T0095493.1 MGP_129S1SvImJ_G0035520.1 mouse_genomes_project X 2338377 2340713 + Wdr45 protein_coding processed_transcript MGP_129S1SvImJ_T0095494.1 MGP_129S1SvImJ_G0035520.1 mouse_genomes_project X 2341405 2342323 + Wdr45 protein_coding processed_transcript MGP_129S1SvImJ_T0011232.1 MGP_129S1SvImJ_G0009348.1 mouse_genomes_project X 133553697 133553813 + Mir6383 miRNA miRNA MGP_129S1SvImJ_T0005634.1 MGP_129S1SvImJ_G0004748.1 mouse_genomes_project X 155643046 155690888 - Gm15169 antisense antisense MGP_129S1SvImJ_T0005635.1 MGP_129S1SvImJ_G0004748.1 mouse_genomes_project X 155672420 155690881 - Gm15169 antisense antisense MGP_129S1SvImJ_T0016413.1 MGP_129S1SvImJ_G0014502.1 mouse_genomes_project X 66227485 66228030 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011189.1 MGP_129S1SvImJ_G0009305.1 mouse_genomes_project X 62387668 62387745 - Mir871 miRNA miRNA MGP_129S1SvImJ_T0100280.1 MGP_129S1SvImJ_G0038347.1 mouse_genomes_project X 124918099 124918206 - Gm25061 snRNA snRNA MGP_129S1SvImJ_T0016450.1 MGP_129S1SvImJ_G0014539.1 mouse_genomes_project X 74224636 74224949 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097035.1 MGP_129S1SvImJ_G0035960.1 mouse_genomes_project X 97915580 97932081 - MGP_129S1SvImJ_P0097035 Zmym3 protein_coding protein_coding MGP_129S1SvImJ_T0097036.1 MGP_129S1SvImJ_G0035960.1 mouse_genomes_project X 97915580 97931142 - MGP_129S1SvImJ_P0097036 Zmym3 protein_coding protein_coding MGP_129S1SvImJ_T0097037.1 MGP_129S1SvImJ_G0035960.1 mouse_genomes_project X 97915580 97931948 - MGP_129S1SvImJ_P0097037 Zmym3 protein_coding protein_coding MGP_129S1SvImJ_T0097038.1 MGP_129S1SvImJ_G0035960.1 mouse_genomes_project X 97915580 97931026 - MGP_129S1SvImJ_P0097038 Zmym3 protein_coding protein_coding MGP_129S1SvImJ_T0097039.1 MGP_129S1SvImJ_G0035960.1 mouse_genomes_project X 97917175 97920931 - Zmym3 protein_coding processed_transcript MGP_129S1SvImJ_T0097040.1 MGP_129S1SvImJ_G0035960.1 mouse_genomes_project X 97924440 97926147 - Zmym3 protein_coding retained_intron MGP_129S1SvImJ_T0097041.1 MGP_129S1SvImJ_G0035960.1 mouse_genomes_project X 97925428 97928705 - Zmym3 protein_coding processed_transcript MGP_129S1SvImJ_T0097042.1 MGP_129S1SvImJ_G0035960.1 mouse_genomes_project X 97925736 97926394 - Zmym3 protein_coding retained_intron MGP_129S1SvImJ_T0097043.1 MGP_129S1SvImJ_G0035960.1 mouse_genomes_project X 97926156 97928604 - Zmym3 protein_coding retained_intron MGP_129S1SvImJ_T0097044.1 MGP_129S1SvImJ_G0035960.1 mouse_genomes_project X 97926157 97931037 - MGP_129S1SvImJ_P0097044 Zmym3 protein_coding protein_coding MGP_129S1SvImJ_T0097045.1 MGP_129S1SvImJ_G0035960.1 mouse_genomes_project X 97926160 97931917 - MGP_129S1SvImJ_P0097045 Zmym3 protein_coding protein_coding MGP_129S1SvImJ_T0097046.1 MGP_129S1SvImJ_G0035960.1 mouse_genomes_project X 97926160 97931069 - MGP_129S1SvImJ_P0097046 Zmym3 protein_coding protein_coding MGP_129S1SvImJ_T0097047.1 MGP_129S1SvImJ_G0035960.1 mouse_genomes_project X 97926165 97931444 - MGP_129S1SvImJ_P0097047 Zmym3 protein_coding protein_coding MGP_129S1SvImJ_T0097048.1 MGP_129S1SvImJ_G0035960.1 mouse_genomes_project X 97926185 97931592 - MGP_129S1SvImJ_P0097048 Zmym3 protein_coding protein_coding MGP_129S1SvImJ_T0097049.1 MGP_129S1SvImJ_G0035960.1 mouse_genomes_project X 97926242 97928601 - Zmym3 protein_coding retained_intron MGP_129S1SvImJ_T0097050.1 MGP_129S1SvImJ_G0035960.1 mouse_genomes_project X 97927414 97931057 - Zmym3 protein_coding processed_transcript MGP_129S1SvImJ_T0097051.1 MGP_129S1SvImJ_G0035960.1 mouse_genomes_project X 97927501 97928918 - Zmym3 protein_coding retained_intron MGP_129S1SvImJ_T0097052.1 MGP_129S1SvImJ_G0035960.1 mouse_genomes_project X 97927610 97931088 - MGP_129S1SvImJ_P0097052 Zmym3 protein_coding protein_coding MGP_129S1SvImJ_T0011157.1 MGP_129S1SvImJ_G0009273.1 mouse_genomes_project X 43815275 43815394 + Gm27828 miRNA miRNA MGP_129S1SvImJ_T0011780.1 MGP_129S1SvImJ_G0009896.1 mouse_genomes_project X 84098230 84098514 - Gm24812 misc_RNA misc_RNA MGP_129S1SvImJ_T0095772.1 MGP_129S1SvImJ_G0035596.1 mouse_genomes_project X 15593308 15609942 + MGP_129S1SvImJ_P0095772 Usp11 protein_coding protein_coding MGP_129S1SvImJ_T0095773.1 MGP_129S1SvImJ_G0035596.1 mouse_genomes_project X 15593336 15602556 + Usp11 protein_coding processed_transcript MGP_129S1SvImJ_T0095774.1 MGP_129S1SvImJ_G0035596.1 mouse_genomes_project X 15593362 15607088 + Usp11 protein_coding retained_intron MGP_129S1SvImJ_T0095775.1 MGP_129S1SvImJ_G0035596.1 mouse_genomes_project X 15601227 15609940 + Usp11 protein_coding retained_intron MGP_129S1SvImJ_T0095715.1 MGP_129S1SvImJ_G0035579.1 mouse_genomes_project X 11475999 11544105 + MGP_129S1SvImJ_P0095715 Maoa protein_coding protein_coding MGP_129S1SvImJ_T0096723.1 MGP_129S1SvImJ_G0035864.1 mouse_genomes_project X 72146978 72150458 + MGP_129S1SvImJ_P0096723 protein_coding protein_coding MGP_129S1SvImJ_T0100287.1 MGP_129S1SvImJ_G0038354.1 mouse_genomes_project X 143233774 143233872 - Gm27659 snRNA snRNA MGP_129S1SvImJ_T0096330.1 MGP_129S1SvImJ_G0035794.1 mouse_genomes_project X 68517541 68534905 + MGP_129S1SvImJ_P0096330 Gabrq protein_coding unknown_likely_coding MGP_129S1SvImJ_T0096331.1 MGP_129S1SvImJ_G0035794.1 mouse_genomes_project X 68517731 68530838 + MGP_129S1SvImJ_P0096331 Gabrq protein_coding protein_coding MGP_129S1SvImJ_T0100251.1 MGP_129S1SvImJ_G0038318.1 mouse_genomes_project X 60327881 60327987 + Gm26111 snRNA snRNA MGP_129S1SvImJ_T0101530.1 MGP_129S1SvImJ_G0039597.1 mouse_genomes_project X 97626543 97626663 - Gm24061 snoRNA snoRNA MGP_129S1SvImJ_T0016506.1 MGP_129S1SvImJ_G0014595.1 mouse_genomes_project X 86687879 86690285 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016876.1 MGP_129S1SvImJ_G0014965.1 mouse_genomes_project X 156054668 156055752 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016812.1 MGP_129S1SvImJ_G0014901.1 mouse_genomes_project X 142783089 142783723 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102860.1 MGP_129S1SvImJ_G0040692.1 mouse_genomes_project X 73909118 73915832 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0016489.1 MGP_129S1SvImJ_G0014578.1 mouse_genomes_project X 84596082 84596424 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096417.1 MGP_129S1SvImJ_G0035822.1 mouse_genomes_project X 69568647 69604054 - MGP_129S1SvImJ_P0096417 Pdzd4 protein_coding protein_coding MGP_129S1SvImJ_T0096418.1 MGP_129S1SvImJ_G0035822.1 mouse_genomes_project X 69568647 69604054 - MGP_129S1SvImJ_P0096418 Pdzd4 protein_coding protein_coding MGP_129S1SvImJ_T0016270.1 MGP_129S1SvImJ_G0014359.1 mouse_genomes_project X 31112439 31113045 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016562.1 MGP_129S1SvImJ_G0014651.1 mouse_genomes_project X 96240307 96241500 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016399.1 MGP_129S1SvImJ_G0014488.1 mouse_genomes_project X 63324032 63324595 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016510.1 MGP_129S1SvImJ_G0014599.1 mouse_genomes_project X 87552517 87553468 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016571.1 MGP_129S1SvImJ_G0014660.1 mouse_genomes_project X 98036141 98037402 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016251.1 MGP_129S1SvImJ_G0014340.1 mouse_genomes_project X 15212104 15212510 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011184.1 MGP_129S1SvImJ_G0009300.1 mouse_genomes_project X 62374650 62374721 - Mir741 miRNA miRNA MGP_129S1SvImJ_T0097554.1 MGP_129S1SvImJ_G0036124.1 mouse_genomes_project X 137061286 137176600 + MGP_129S1SvImJ_P0097554 Rnf128 protein_coding protein_coding MGP_129S1SvImJ_T0097555.1 MGP_129S1SvImJ_G0036124.1 mouse_genomes_project X 137110241 137176607 + MGP_129S1SvImJ_P0097555 Rnf128 protein_coding protein_coding MGP_129S1SvImJ_T0097556.1 MGP_129S1SvImJ_G0036124.1 mouse_genomes_project X 137110988 137175203 + Rnf128 protein_coding processed_transcript MGP_129S1SvImJ_T0016228.1 MGP_129S1SvImJ_G0014317.1 mouse_genomes_project X 8183570 8185251 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018632.1 MGP_129S1SvImJ_G0015768.1 mouse_genomes_project X 1973517 1975635 + Gm14379 processed_transcript processed_transcript MGP_129S1SvImJ_T0005629.1 MGP_129S1SvImJ_G0004746.1 mouse_genomes_project X 149037679 149099312 - A230072E10Rik antisense antisense MGP_129S1SvImJ_T0005630.1 MGP_129S1SvImJ_G0004746.1 mouse_genomes_project X 149038929 149056668 - A230072E10Rik antisense antisense MGP_129S1SvImJ_T0005631.1 MGP_129S1SvImJ_G0004746.1 mouse_genomes_project X 149038929 149044991 - A230072E10Rik antisense antisense MGP_129S1SvImJ_T0005632.1 MGP_129S1SvImJ_G0004746.1 mouse_genomes_project X 149058594 149096345 - A230072E10Rik antisense antisense MGP_129S1SvImJ_T0097117.1 MGP_129S1SvImJ_G0035979.1 mouse_genomes_project X 99401594 99405414 + MGP_129S1SvImJ_P0097117 protein_coding protein_coding MGP_129S1SvImJ_T0097119.1 MGP_129S1SvImJ_G0035979.1 mouse_genomes_project X 99402376 99408095 + MGP_129S1SvImJ_P0097119 protein_coding protein_coding MGP_129S1SvImJ_T0016287.1 MGP_129S1SvImJ_G0014376.1 mouse_genomes_project X 35005636 35006065 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102841.1 MGP_129S1SvImJ_G0040673.1 mouse_genomes_project X 4004018 4004283 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0016903.1 MGP_129S1SvImJ_G0014992.1 mouse_genomes_project X 160922878 160923278 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095657.1 MGP_129S1SvImJ_G0035563.1 mouse_genomes_project X 5000005 5071096 + MGP_129S1SvImJ_P0095657 Otc protein_coding protein_coding MGP_129S1SvImJ_T0095658.1 MGP_129S1SvImJ_G0035563.1 mouse_genomes_project X 5000067 5067206 + MGP_129S1SvImJ_P0095658 Otc protein_coding protein_coding MGP_129S1SvImJ_T0011215.1 MGP_129S1SvImJ_G0009331.1 mouse_genomes_project X 98576535 98576639 - Gm27843 miRNA miRNA MGP_129S1SvImJ_T0096409.1 MGP_129S1SvImJ_G0035821.1 mouse_genomes_project X 69562317 69566114 + MGP_129S1SvImJ_P0096409 Ssr4 protein_coding protein_coding MGP_129S1SvImJ_T0096410.1 MGP_129S1SvImJ_G0035821.1 mouse_genomes_project X 69562351 69566116 + MGP_129S1SvImJ_P0096410 Ssr4 protein_coding protein_coding MGP_129S1SvImJ_T0096411.1 MGP_129S1SvImJ_G0035821.1 mouse_genomes_project X 69562471 69564382 + Ssr4 protein_coding retained_intron MGP_129S1SvImJ_T0096412.1 MGP_129S1SvImJ_G0035821.1 mouse_genomes_project X 69562473 69565622 + Ssr4 protein_coding retained_intron MGP_129S1SvImJ_T0096413.1 MGP_129S1SvImJ_G0035821.1 mouse_genomes_project X 69562473 69566116 + Ssr4 protein_coding retained_intron MGP_129S1SvImJ_T0096414.1 MGP_129S1SvImJ_G0035821.1 mouse_genomes_project X 69562513 69566101 + Ssr4 protein_coding retained_intron MGP_129S1SvImJ_T0096415.1 MGP_129S1SvImJ_G0035821.1 mouse_genomes_project X 69562554 69565453 + Ssr4 protein_coding retained_intron MGP_129S1SvImJ_T0096416.1 MGP_129S1SvImJ_G0035821.1 mouse_genomes_project X 69564133 69566120 + Ssr4 protein_coding retained_intron MGP_129S1SvImJ_T0097008.1 MGP_129S1SvImJ_G0035953.1 mouse_genomes_project X 97753016 97760174 + MGP_129S1SvImJ_P0097008 Foxo4 protein_coding protein_coding MGP_129S1SvImJ_T0097009.1 MGP_129S1SvImJ_G0035953.1 mouse_genomes_project X 97753055 97754924 + Foxo4 protein_coding processed_transcript MGP_129S1SvImJ_T0097010.1 MGP_129S1SvImJ_G0035953.1 mouse_genomes_project X 97753309 97757722 + MGP_129S1SvImJ_P0097010 Foxo4 protein_coding protein_coding MGP_129S1SvImJ_T0016275.1 MGP_129S1SvImJ_G0014364.1 mouse_genomes_project X 31979408 31982558 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011248.1 MGP_129S1SvImJ_G0009364.1 mouse_genomes_project X 155074983 155075072 + Gm23798 miRNA miRNA MGP_129S1SvImJ_T0095795.1 MGP_129S1SvImJ_G0035602.1 mouse_genomes_project X 15844933 15865203 - Uxt protein_coding processed_transcript MGP_129S1SvImJ_T0095796.1 MGP_129S1SvImJ_G0035602.1 mouse_genomes_project X 15854873 15865229 - MGP_129S1SvImJ_P0095796 Uxt protein_coding protein_coding MGP_129S1SvImJ_T0095797.1 MGP_129S1SvImJ_G0035602.1 mouse_genomes_project X 15855134 15865127 - Uxt protein_coding retained_intron MGP_129S1SvImJ_T0095798.1 MGP_129S1SvImJ_G0035602.1 mouse_genomes_project X 15855140 15865212 - Uxt protein_coding processed_transcript MGP_129S1SvImJ_T0095799.1 MGP_129S1SvImJ_G0035602.1 mouse_genomes_project X 15862273 15865198 - Uxt protein_coding retained_intron MGP_129S1SvImJ_T0095800.1 MGP_129S1SvImJ_G0035602.1 mouse_genomes_project X 15864628 15865186 - Uxt protein_coding processed_transcript MGP_129S1SvImJ_T0097120.1 MGP_129S1SvImJ_G0035980.1 mouse_genomes_project X 99515218 99523201 - MGP_129S1SvImJ_P0097120 Dmrtc1a protein_coding protein_coding MGP_129S1SvImJ_T0097121.1 MGP_129S1SvImJ_G0035980.1 mouse_genomes_project X 99515224 99518469 - MGP_129S1SvImJ_P0097121 Dmrtc1a protein_coding protein_coding MGP_129S1SvImJ_T0097122.1 MGP_129S1SvImJ_G0035980.1 mouse_genomes_project X 99515224 99523216 - MGP_129S1SvImJ_P0097122 Dmrtc1a protein_coding protein_coding MGP_129S1SvImJ_T0097123.1 MGP_129S1SvImJ_G0035980.1 mouse_genomes_project X 99515224 99518558 - MGP_129S1SvImJ_P0097123 Dmrtc1a protein_coding protein_coding MGP_129S1SvImJ_T0097524.1 MGP_129S1SvImJ_G0036113.1 mouse_genomes_project X 134465386 134501423 + MGP_129S1SvImJ_P0097524 Fam199x protein_coding protein_coding MGP_129S1SvImJ_T0097540.1 MGP_129S1SvImJ_G0036119.1 mouse_genomes_project X 136566104 136573267 + MGP_129S1SvImJ_P0097540 4930513O06Rik protein_coding protein_coding MGP_129S1SvImJ_T0096346.1 MGP_129S1SvImJ_G0035802.1 mouse_genomes_project X 68867329 68873783 + MGP_129S1SvImJ_P0096346 protein_coding protein_coding MGP_129S1SvImJ_T0095811.1 MGP_129S1SvImJ_G0035606.1 mouse_genomes_project X 16023004 16028377 + MGP_129S1SvImJ_P0095811 Ssxa1 protein_coding protein_coding MGP_129S1SvImJ_T0095812.1 MGP_129S1SvImJ_G0035606.1 mouse_genomes_project X 16025556 16028377 + MGP_129S1SvImJ_P0095812 Ssxa1 protein_coding protein_coding MGP_129S1SvImJ_T0016311.1 MGP_129S1SvImJ_G0014400.1 mouse_genomes_project X 39935323 39936293 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096885.1 MGP_129S1SvImJ_G0035922.1 mouse_genomes_project X 92286296 92309769 - MGP_129S1SvImJ_P0096885 Las1l protein_coding protein_coding MGP_129S1SvImJ_T0096886.1 MGP_129S1SvImJ_G0035922.1 mouse_genomes_project X 92286296 92309769 - MGP_129S1SvImJ_P0096886 Las1l protein_coding protein_coding MGP_129S1SvImJ_T0096887.1 MGP_129S1SvImJ_G0035922.1 mouse_genomes_project X 92292567 92309742 - Las1l protein_coding retained_intron MGP_129S1SvImJ_T0096888.1 MGP_129S1SvImJ_G0035922.1 mouse_genomes_project X 92292700 92300285 - Las1l protein_coding processed_transcript MGP_129S1SvImJ_T0096889.1 MGP_129S1SvImJ_G0035922.1 mouse_genomes_project X 92299251 92301033 - Las1l protein_coding processed_transcript MGP_129S1SvImJ_T0096890.1 MGP_129S1SvImJ_G0035922.1 mouse_genomes_project X 92299766 92303888 - Las1l protein_coding processed_transcript MGP_129S1SvImJ_T0096891.1 MGP_129S1SvImJ_G0035922.1 mouse_genomes_project X 92302264 92309818 - Las1l protein_coding retained_intron MGP_129S1SvImJ_T0009379.1 MGP_129S1SvImJ_G0007532.1 mouse_genomes_project X 16280291 16284081 - Gm26593 lincRNA lincRNA MGP_129S1SvImJ_T0011160.1 MGP_129S1SvImJ_G0009276.1 mouse_genomes_project X 47957882 47957957 - Mir363 miRNA miRNA MGP_129S1SvImJ_T0097395.1 MGP_129S1SvImJ_G0036074.1 mouse_genomes_project X 131874365 131884605 + MGP_129S1SvImJ_P0097395 Armcx4 protein_coding protein_coding MGP_129S1SvImJ_T0095911.1 MGP_129S1SvImJ_G0035657.1 mouse_genomes_project X 32947680 32954580 - MGP_129S1SvImJ_P0095911 protein_coding protein_coding MGP_129S1SvImJ_T0095428.1 MGP_129S1SvImJ_G0035506.1 mouse_genomes_project X 1407186 1526815 + MGP_129S1SvImJ_P0095428 Dgkk protein_coding protein_coding MGP_129S1SvImJ_T0011144.1 MGP_129S1SvImJ_G0009260.1 mouse_genomes_project X 8515615 8515684 + Gm25246 miRNA miRNA MGP_129S1SvImJ_T0095889.1 MGP_129S1SvImJ_G0035639.1 mouse_genomes_project X 32454748 32459056 + MGP_129S1SvImJ_P0095889 protein_coding protein_coding MGP_129S1SvImJ_T0016909.1 MGP_129S1SvImJ_G0014998.1 mouse_genomes_project X 162055314 162055490 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016543.1 MGP_129S1SvImJ_G0014632.1 mouse_genomes_project X 91619277 91620260 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016376.1 MGP_129S1SvImJ_G0014465.1 mouse_genomes_project X 57609462 57609964 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101542.1 MGP_129S1SvImJ_G0039609.1 mouse_genomes_project X 129681156 129681287 - Gm23768 snoRNA snoRNA MGP_129S1SvImJ_T0016895.1 MGP_129S1SvImJ_G0014984.1 mouse_genomes_project X 159225820 159226424 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102840.1 MGP_129S1SvImJ_G0040672.1 mouse_genomes_project X 3783414 3783927 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0096265.1 MGP_129S1SvImJ_G0035775.1 mouse_genomes_project X 65566335 65567014 + MGP_129S1SvImJ_P0096265 Gm6812 protein_coding protein_coding MGP_129S1SvImJ_T0009369.1 MGP_129S1SvImJ_G0007526.1 mouse_genomes_project X 7145666 7160877 - Gm14635 lincRNA lincRNA MGP_129S1SvImJ_T0009370.1 MGP_129S1SvImJ_G0007526.1 mouse_genomes_project X 7146521 7151107 - Gm14635 lincRNA lincRNA MGP_129S1SvImJ_T0097564.1 MGP_129S1SvImJ_G0036129.1 mouse_genomes_project X 137337483 137390077 - MGP_129S1SvImJ_P0097564 Morc4 protein_coding protein_coding MGP_129S1SvImJ_T0097565.1 MGP_129S1SvImJ_G0036129.1 mouse_genomes_project X 137337749 137374663 - MGP_129S1SvImJ_P0097565 Morc4 protein_coding protein_coding MGP_129S1SvImJ_T0097566.1 MGP_129S1SvImJ_G0036129.1 mouse_genomes_project X 137337755 137390100 - MGP_129S1SvImJ_P0097566 Morc4 protein_coding protein_coding MGP_129S1SvImJ_T0097567.1 MGP_129S1SvImJ_G0036129.1 mouse_genomes_project X 137340082 137352144 - Morc4 protein_coding retained_intron MGP_129S1SvImJ_T0097568.1 MGP_129S1SvImJ_G0036129.1 mouse_genomes_project X 137352513 137371729 - MGP_129S1SvImJ_P0097568 Morc4 protein_coding protein_coding MGP_129S1SvImJ_T0097569.1 MGP_129S1SvImJ_G0036129.1 mouse_genomes_project X 137373122 137390048 - Morc4 protein_coding retained_intron MGP_129S1SvImJ_T0097570.1 MGP_129S1SvImJ_G0036129.1 mouse_genomes_project X 137373129 137390045 - Morc4 protein_coding processed_transcript MGP_129S1SvImJ_T0097571.1 MGP_129S1SvImJ_G0036129.1 mouse_genomes_project X 137375534 137389833 - Morc4 protein_coding retained_intron MGP_129S1SvImJ_T0097572.1 MGP_129S1SvImJ_G0036129.1 mouse_genomes_project X 137375568 137389796 - MGP_129S1SvImJ_P0097572 Morc4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097573.1 MGP_129S1SvImJ_G0036129.1 mouse_genomes_project X 137375682 137389622 - MGP_129S1SvImJ_P0097573 Morc4 protein_coding protein_coding MGP_129S1SvImJ_T0016447.1 MGP_129S1SvImJ_G0014536.1 mouse_genomes_project X 73490964 73491564 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016206.1 MGP_129S1SvImJ_G0014295.1 mouse_genomes_project X 3679780 3680442 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016590.1 MGP_129S1SvImJ_G0014679.1 mouse_genomes_project X 99906087 99907891 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097856.1 MGP_129S1SvImJ_G0036193.1 mouse_genomes_project X 150945000 150979233 + MGP_129S1SvImJ_P0097856 Rragb protein_coding protein_coding MGP_129S1SvImJ_T0097857.1 MGP_129S1SvImJ_G0036193.1 mouse_genomes_project X 150945006 150958294 + MGP_129S1SvImJ_P0097857 Rragb protein_coding protein_coding MGP_129S1SvImJ_T0100228.1 MGP_129S1SvImJ_G0038295.1 mouse_genomes_project X 12203730 12203834 + Gm22294 snRNA snRNA MGP_129S1SvImJ_T0016442.1 MGP_129S1SvImJ_G0014531.1 mouse_genomes_project X 72592286 72593463 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016483.1 MGP_129S1SvImJ_G0014572.1 mouse_genomes_project X 82124261 82124775 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096582.1 MGP_129S1SvImJ_G0035839.1 mouse_genomes_project X 70095803 70104183 + MGP_129S1SvImJ_P0096582 Atp6ap1 protein_coding protein_coding MGP_129S1SvImJ_T0096583.1 MGP_129S1SvImJ_G0035839.1 mouse_genomes_project X 70095849 70101836 + MGP_129S1SvImJ_P0096583 Atp6ap1 protein_coding protein_coding MGP_129S1SvImJ_T0096584.1 MGP_129S1SvImJ_G0035839.1 mouse_genomes_project X 70095868 70102892 + MGP_129S1SvImJ_P0096584 Atp6ap1 protein_coding protein_coding MGP_129S1SvImJ_T0096585.1 MGP_129S1SvImJ_G0035839.1 mouse_genomes_project X 70095869 70104151 + MGP_129S1SvImJ_P0096585 Atp6ap1 protein_coding protein_coding MGP_129S1SvImJ_T0096586.1 MGP_129S1SvImJ_G0035839.1 mouse_genomes_project X 70095883 70100820 + Atp6ap1 protein_coding retained_intron MGP_129S1SvImJ_T0096587.1 MGP_129S1SvImJ_G0035839.1 mouse_genomes_project X 70095939 70102925 + MGP_129S1SvImJ_P0096587 Atp6ap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096588.1 MGP_129S1SvImJ_G0035839.1 mouse_genomes_project X 70095968 70101976 + MGP_129S1SvImJ_P0096588 Atp6ap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096589.1 MGP_129S1SvImJ_G0035839.1 mouse_genomes_project X 70101385 70102695 + Atp6ap1 protein_coding processed_transcript MGP_129S1SvImJ_T0096590.1 MGP_129S1SvImJ_G0035839.1 mouse_genomes_project X 70102014 70103475 + Atp6ap1 protein_coding retained_intron MGP_129S1SvImJ_T0096591.1 MGP_129S1SvImJ_G0035839.1 mouse_genomes_project X 70102950 70103477 + MGP_129S1SvImJ_P0096591 Atp6ap1 protein_coding protein_coding MGP_129S1SvImJ_T0016307.1 MGP_129S1SvImJ_G0014396.1 mouse_genomes_project X 38900936 38901571 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096217.1 MGP_129S1SvImJ_G0035756.1 mouse_genomes_project X 55407909 55539892 - MGP_129S1SvImJ_P0096217 Mcf2 protein_coding protein_coding MGP_129S1SvImJ_T0096218.1 MGP_129S1SvImJ_G0035756.1 mouse_genomes_project X 55407909 55506634 - MGP_129S1SvImJ_P0096218 Mcf2 protein_coding protein_coding MGP_129S1SvImJ_T0096219.1 MGP_129S1SvImJ_G0035756.1 mouse_genomes_project X 55407912 55506577 - MGP_129S1SvImJ_P0096219 Mcf2 protein_coding protein_coding MGP_129S1SvImJ_T0096959.1 MGP_129S1SvImJ_G0035940.1 mouse_genomes_project X 96879609 96880482 + MGP_129S1SvImJ_P0096959 Otud6a protein_coding protein_coding MGP_129S1SvImJ_T0102854.1 MGP_129S1SvImJ_G0040686.1 mouse_genomes_project X 70580543 70581410 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0016511.1 MGP_129S1SvImJ_G0014600.1 mouse_genomes_project X 87557770 87558145 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097197.1 MGP_129S1SvImJ_G0036006.1 mouse_genomes_project X 103243529 103317350 - MGP_129S1SvImJ_P0097197 Fndc3c1 protein_coding protein_coding MGP_129S1SvImJ_T0097198.1 MGP_129S1SvImJ_G0036006.1 mouse_genomes_project X 103248900 103256869 - Fndc3c1 protein_coding retained_intron MGP_129S1SvImJ_T0097199.1 MGP_129S1SvImJ_G0036006.1 mouse_genomes_project X 103279744 103317098 - MGP_129S1SvImJ_P0097199 Fndc3c1 protein_coding protein_coding MGP_129S1SvImJ_T0097200.1 MGP_129S1SvImJ_G0036006.1 mouse_genomes_project X 103304735 103316973 - MGP_129S1SvImJ_P0097200 Fndc3c1 protein_coding protein_coding MGP_129S1SvImJ_T0097201.1 MGP_129S1SvImJ_G0036006.1 mouse_genomes_project X 103304747 103317477 - MGP_129S1SvImJ_P0097201 Fndc3c1 protein_coding protein_coding MGP_129S1SvImJ_T0016775.1 MGP_129S1SvImJ_G0014864.1 mouse_genomes_project X 137993846 137994675 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016868.1 MGP_129S1SvImJ_G0014957.1 mouse_genomes_project X 155315557 155316471 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096638.1 MGP_129S1SvImJ_G0035847.1 mouse_genomes_project X 70201508 70242363 + MGP_129S1SvImJ_P0096638 Ikbkg protein_coding protein_coding MGP_129S1SvImJ_T0096639.1 MGP_129S1SvImJ_G0035847.1 mouse_genomes_project X 70201509 70262082 + MGP_129S1SvImJ_P0096639 Ikbkg protein_coding protein_coding MGP_129S1SvImJ_T0096640.1 MGP_129S1SvImJ_G0035847.1 mouse_genomes_project X 70201509 70262082 + MGP_129S1SvImJ_P0096640 Ikbkg protein_coding protein_coding MGP_129S1SvImJ_T0096641.1 MGP_129S1SvImJ_G0035847.1 mouse_genomes_project X 70201545 70248258 + MGP_129S1SvImJ_P0096641 Ikbkg protein_coding protein_coding MGP_129S1SvImJ_T0096645.1 MGP_129S1SvImJ_G0035847.1 mouse_genomes_project X 70232903 70248320 + MGP_129S1SvImJ_P0096645 Ikbkg protein_coding protein_coding MGP_129S1SvImJ_T0096646.1 MGP_129S1SvImJ_G0035847.1 mouse_genomes_project X 70232973 70257045 + MGP_129S1SvImJ_P0096646 Ikbkg protein_coding protein_coding MGP_129S1SvImJ_T0096647.1 MGP_129S1SvImJ_G0035847.1 mouse_genomes_project X 70232981 70262158 + MGP_129S1SvImJ_P0096647 Ikbkg protein_coding protein_coding MGP_129S1SvImJ_T0096648.1 MGP_129S1SvImJ_G0035847.1 mouse_genomes_project X 70232981 70262082 + MGP_129S1SvImJ_P0096648 Ikbkg protein_coding protein_coding MGP_129S1SvImJ_T0096649.1 MGP_129S1SvImJ_G0035847.1 mouse_genomes_project X 70233002 70257404 + MGP_129S1SvImJ_P0096649 Ikbkg protein_coding protein_coding MGP_129S1SvImJ_T0096650.1 MGP_129S1SvImJ_G0035847.1 mouse_genomes_project X 70233007 70241238 + MGP_129S1SvImJ_P0096650 Ikbkg protein_coding protein_coding MGP_129S1SvImJ_T0096652.1 MGP_129S1SvImJ_G0035847.1 mouse_genomes_project X 70236271 70245540 + MGP_129S1SvImJ_P0096652 Ikbkg protein_coding protein_coding MGP_129S1SvImJ_T0096653.1 MGP_129S1SvImJ_G0035847.1 mouse_genomes_project X 70237650 70251727 + MGP_129S1SvImJ_P0096653 Ikbkg protein_coding protein_coding MGP_129S1SvImJ_T0096654.1 MGP_129S1SvImJ_G0035847.1 mouse_genomes_project X 70237684 70262082 + MGP_129S1SvImJ_P0096654 Ikbkg protein_coding protein_coding MGP_129S1SvImJ_T0096655.1 MGP_129S1SvImJ_G0035847.1 mouse_genomes_project X 70238040 70258590 + MGP_129S1SvImJ_P0096655 Ikbkg protein_coding protein_coding MGP_129S1SvImJ_T0096656.1 MGP_129S1SvImJ_G0035847.1 mouse_genomes_project X 70238073 70259824 + MGP_129S1SvImJ_P0096656 Ikbkg protein_coding protein_coding MGP_129S1SvImJ_T0096657.1 MGP_129S1SvImJ_G0035847.1 mouse_genomes_project X 70238091 70241725 + Ikbkg protein_coding retained_intron MGP_129S1SvImJ_T0096658.1 MGP_129S1SvImJ_G0035847.1 mouse_genomes_project X 70238132 70252224 + MGP_129S1SvImJ_P0096658 Ikbkg protein_coding protein_coding MGP_129S1SvImJ_T0096659.1 MGP_129S1SvImJ_G0035847.1 mouse_genomes_project X 70247256 70256527 + Ikbkg protein_coding processed_transcript MGP_129S1SvImJ_T0096706.1 MGP_129S1SvImJ_G0035860.1 mouse_genomes_project X 71260743 71298300 + MGP_129S1SvImJ_P0096706 Brcc3 protein_coding protein_coding MGP_129S1SvImJ_T0096707.1 MGP_129S1SvImJ_G0035860.1 mouse_genomes_project X 71260812 71296284 + MGP_129S1SvImJ_P0096707 Brcc3 protein_coding protein_coding MGP_129S1SvImJ_T0096708.1 MGP_129S1SvImJ_G0035860.1 mouse_genomes_project X 71260815 71295031 + Brcc3 protein_coding retained_intron MGP_129S1SvImJ_T0096709.1 MGP_129S1SvImJ_G0035860.1 mouse_genomes_project X 71260825 71296007 + MGP_129S1SvImJ_P0096709 Brcc3 protein_coding protein_coding MGP_129S1SvImJ_T0096710.1 MGP_129S1SvImJ_G0035860.1 mouse_genomes_project X 71260831 71283099 + MGP_129S1SvImJ_P0096710 Brcc3 protein_coding protein_coding MGP_129S1SvImJ_T0096711.1 MGP_129S1SvImJ_G0035860.1 mouse_genomes_project X 71261422 71280603 + MGP_129S1SvImJ_P0096711 Brcc3 protein_coding protein_coding MGP_129S1SvImJ_T0096712.1 MGP_129S1SvImJ_G0035860.1 mouse_genomes_project X 71279103 71295523 + Brcc3 protein_coding retained_intron MGP_129S1SvImJ_T0096823.1 MGP_129S1SvImJ_G0035906.1 mouse_genomes_project X 90349301 90356115 + MGP_129S1SvImJ_P0096823 AU015836 protein_coding protein_coding MGP_129S1SvImJ_T0096824.1 MGP_129S1SvImJ_G0035906.1 mouse_genomes_project X 90349316 90356115 + MGP_129S1SvImJ_P0096824 AU015836 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096825.1 MGP_129S1SvImJ_G0035906.1 mouse_genomes_project X 90349324 90350301 + MGP_129S1SvImJ_P0096825 AU015836 protein_coding protein_coding MGP_129S1SvImJ_T0096826.1 MGP_129S1SvImJ_G0035906.1 mouse_genomes_project X 90350284 90352308 + AU015836 protein_coding processed_transcript MGP_129S1SvImJ_T0096827.1 MGP_129S1SvImJ_G0035906.1 mouse_genomes_project X 90350438 90355716 + MGP_129S1SvImJ_P0096827 AU015836 protein_coding protein_coding MGP_129S1SvImJ_T0101808.1 MGP_129S1SvImJ_G0039772.1 mouse_genomes_project X 101691730 101692296 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101809.1 MGP_129S1SvImJ_G0039772.1 mouse_genomes_project X 101691751 101692246 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0096026.1 MGP_129S1SvImJ_G0035688.1 mouse_genomes_project X 43279495 43294695 + MGP_129S1SvImJ_P0096026 Sash3 protein_coding protein_coding MGP_129S1SvImJ_T0096027.1 MGP_129S1SvImJ_G0035688.1 mouse_genomes_project X 43279720 43293386 + MGP_129S1SvImJ_P0096027 Sash3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0095557.1 MGP_129S1SvImJ_G0035531.1 mouse_genomes_project X 2533899 2534042 - MGP_129S1SvImJ_P0095557 protein_coding protein_coding MGP_129S1SvImJ_T0016844.1 MGP_129S1SvImJ_G0014933.1 mouse_genomes_project X 150358291 150358817 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097439.1 MGP_129S1SvImJ_G0036087.1 mouse_genomes_project X 132994531 133035277 - MGP_129S1SvImJ_P0097439 Tcp11x2 protein_coding protein_coding MGP_129S1SvImJ_T0096177.1 MGP_129S1SvImJ_G0035743.1 mouse_genomes_project X 52360274 52365959 + MGP_129S1SvImJ_P0096177 Brs3 protein_coding protein_coding MGP_129S1SvImJ_T0016284.1 MGP_129S1SvImJ_G0014373.1 mouse_genomes_project X 34466304 34466711 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097880.1 MGP_129S1SvImJ_G0036208.1 mouse_genomes_project X 152964552 152970406 - MGP_129S1SvImJ_P0097880 protein_coding protein_coding MGP_129S1SvImJ_T0095528.1 MGP_129S1SvImJ_G0035525.1 mouse_genomes_project X 2441366 2457275 + MGP_129S1SvImJ_P0095528 Kcnd1 protein_coding protein_coding MGP_129S1SvImJ_T0095529.1 MGP_129S1SvImJ_G0035525.1 mouse_genomes_project X 2441384 2442345 + Kcnd1 protein_coding processed_transcript MGP_129S1SvImJ_T0011174.1 MGP_129S1SvImJ_G0009290.1 mouse_genomes_project X 54444575 54444654 - Mir504 miRNA miRNA MGP_129S1SvImJ_T0097628.1 MGP_129S1SvImJ_G0036149.1 mouse_genomes_project X 139799475 139801018 - MGP_129S1SvImJ_P0097628 Kcne1l protein_coding protein_coding MGP_129S1SvImJ_T0095446.1 MGP_129S1SvImJ_G0035512.1 mouse_genomes_project X 2189763 2206490 + MGP_129S1SvImJ_P0095446 Foxp3 protein_coding protein_coding MGP_129S1SvImJ_T0095447.1 MGP_129S1SvImJ_G0035512.1 mouse_genomes_project X 2189780 2206481 + MGP_129S1SvImJ_P0095447 Foxp3 protein_coding protein_coding MGP_129S1SvImJ_T0095448.1 MGP_129S1SvImJ_G0035512.1 mouse_genomes_project X 2190570 2206481 + MGP_129S1SvImJ_P0095448 Foxp3 protein_coding protein_coding MGP_129S1SvImJ_T0095449.1 MGP_129S1SvImJ_G0035512.1 mouse_genomes_project X 2197519 2206490 + MGP_129S1SvImJ_P0095449 Foxp3 protein_coding protein_coding MGP_129S1SvImJ_T0095814.1 MGP_129S1SvImJ_G0035608.1 mouse_genomes_project X 16400449 16405070 + MGP_129S1SvImJ_P0095814 Agtr2 protein_coding protein_coding MGP_129S1SvImJ_T0095815.1 MGP_129S1SvImJ_G0035608.1 mouse_genomes_project X 16400627 16402209 + Agtr2 protein_coding processed_transcript MGP_129S1SvImJ_T0016654.1 MGP_129S1SvImJ_G0014743.1 mouse_genomes_project X 109546439 109547418 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016249.1 MGP_129S1SvImJ_G0014338.1 mouse_genomes_project X 14740342 14740558 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016618.1 MGP_129S1SvImJ_G0014707.1 mouse_genomes_project X 102506703 102507090 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097882.1 MGP_129S1SvImJ_G0036210.1 mouse_genomes_project X 153036806 153040183 + MGP_129S1SvImJ_P0097882 protein_coding protein_coding MGP_129S1SvImJ_T0095439.1 MGP_129S1SvImJ_G0035510.1 mouse_genomes_project X 1968873 1973419 - MGP_129S1SvImJ_P0095439 Usp27x protein_coding protein_coding MGP_129S1SvImJ_T0095440.1 MGP_129S1SvImJ_G0035510.1 mouse_genomes_project X 1970183 1973423 - MGP_129S1SvImJ_P0095440 Usp27x protein_coding protein_coding MGP_129S1SvImJ_T0097032.1 MGP_129S1SvImJ_G0035959.1 mouse_genomes_project X 97884637 97893889 + MGP_129S1SvImJ_P0097032 Gjb1 protein_coding protein_coding MGP_129S1SvImJ_T0097033.1 MGP_129S1SvImJ_G0035959.1 mouse_genomes_project X 97885532 97893889 + MGP_129S1SvImJ_P0097033 Gjb1 protein_coding protein_coding MGP_129S1SvImJ_T0097034.1 MGP_129S1SvImJ_G0035959.1 mouse_genomes_project X 97891995 97893889 + MGP_129S1SvImJ_P0097034 Gjb1 protein_coding protein_coding MGP_129S1SvImJ_T0096602.1 MGP_129S1SvImJ_G0035841.1 mouse_genomes_project X 70112496 70119706 + MGP_129S1SvImJ_P0096602 Fam50a protein_coding protein_coding MGP_129S1SvImJ_T0096603.1 MGP_129S1SvImJ_G0035841.1 mouse_genomes_project X 70112589 70119691 + Fam50a protein_coding retained_intron MGP_129S1SvImJ_T0096604.1 MGP_129S1SvImJ_G0035841.1 mouse_genomes_project X 70117040 70117538 + Fam50a protein_coding retained_intron MGP_129S1SvImJ_T0016524.1 MGP_129S1SvImJ_G0014613.1 mouse_genomes_project X 90307804 90308075 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016776.1 MGP_129S1SvImJ_G0014865.1 mouse_genomes_project X 138181046 138181500 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009428.1 MGP_129S1SvImJ_G0007563.1 mouse_genomes_project X 126100301 126103151 + 4930558G05Rik lincRNA lincRNA MGP_129S1SvImJ_T0011779.1 MGP_129S1SvImJ_G0009895.1 mouse_genomes_project X 78819814 78819917 - Gm23671 misc_RNA misc_RNA MGP_129S1SvImJ_T0016239.1 MGP_129S1SvImJ_G0014328.1 mouse_genomes_project X 11465893 11468488 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016862.1 MGP_129S1SvImJ_G0014951.1 mouse_genomes_project X 153819436 153820343 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016833.1 MGP_129S1SvImJ_G0014922.1 mouse_genomes_project X 148430397 148430992 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016595.1 MGP_129S1SvImJ_G0014684.1 mouse_genomes_project X 100135461 100135862 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101541.1 MGP_129S1SvImJ_G0039608.1 mouse_genomes_project X 129634357 129634481 + Gm26406 snoRNA snoRNA MGP_129S1SvImJ_T0096797.1 MGP_129S1SvImJ_G0035893.1 mouse_genomes_project X 82870120 84323837 - MGP_129S1SvImJ_P0096797 Il1rapl1 protein_coding protein_coding MGP_129S1SvImJ_T0096798.1 MGP_129S1SvImJ_G0035893.1 mouse_genomes_project X 82877068 84089261 - MGP_129S1SvImJ_P0096798 Il1rapl1 protein_coding protein_coding MGP_129S1SvImJ_T0096799.1 MGP_129S1SvImJ_G0035893.1 mouse_genomes_project X 82900670 84323837 - MGP_129S1SvImJ_P0096799 Il1rapl1 protein_coding protein_coding MGP_129S1SvImJ_T0095682.1 MGP_129S1SvImJ_G0035570.1 mouse_genomes_project X 7921669 7974891 + MGP_129S1SvImJ_P0095682 Usp9x protein_coding protein_coding MGP_129S1SvImJ_T0095683.1 MGP_129S1SvImJ_G0035570.1 mouse_genomes_project X 7921685 7973603 + Usp9x protein_coding retained_intron MGP_129S1SvImJ_T0095684.1 MGP_129S1SvImJ_G0035570.1 mouse_genomes_project X 7921685 8048201 + MGP_129S1SvImJ_P0095684 Usp9x protein_coding protein_coding MGP_129S1SvImJ_T0095685.1 MGP_129S1SvImJ_G0035570.1 mouse_genomes_project X 7965124 7974675 + MGP_129S1SvImJ_P0095685 Usp9x protein_coding protein_coding MGP_129S1SvImJ_T0095686.1 MGP_129S1SvImJ_G0035570.1 mouse_genomes_project X 7980459 7984793 + Usp9x protein_coding retained_intron MGP_129S1SvImJ_T0095687.1 MGP_129S1SvImJ_G0035570.1 mouse_genomes_project X 7980726 7986005 + Usp9x protein_coding retained_intron MGP_129S1SvImJ_T0095688.1 MGP_129S1SvImJ_G0035570.1 mouse_genomes_project X 8013071 8044771 + MGP_129S1SvImJ_P0095688 Usp9x protein_coding protein_coding MGP_129S1SvImJ_T0009371.1 MGP_129S1SvImJ_G0007527.1 mouse_genomes_project X 8096796 8098439 - 2010308F09Rik lincRNA lincRNA MGP_129S1SvImJ_T0009372.1 MGP_129S1SvImJ_G0007527.1 mouse_genomes_project X 8096839 8109913 - 2010308F09Rik lincRNA lincRNA MGP_129S1SvImJ_T0016456.1 MGP_129S1SvImJ_G0014545.1 mouse_genomes_project X 74556003 74556987 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002500.1 MGP_129S1SvImJ_G0002409.1 mouse_genomes_project X 100242413 100247094 - TEC TEC MGP_129S1SvImJ_T0009429.1 MGP_129S1SvImJ_G0007564.1 mouse_genomes_project X 130835736 130855628 + Gm26851 lincRNA lincRNA MGP_129S1SvImJ_T0016649.1 MGP_129S1SvImJ_G0014738.1 mouse_genomes_project X 109216490 109220361 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016181.1 MGP_129S1SvImJ_G0014270.1 mouse_genomes_project X 465010 466834 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095452.1 MGP_129S1SvImJ_G0035514.1 mouse_genomes_project X 2218335 2248134 + MGP_129S1SvImJ_P0095452 Cacna1f protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095453.1 MGP_129S1SvImJ_G0035514.1 mouse_genomes_project X 2218350 2231062 + Cacna1f protein_coding retained_intron MGP_129S1SvImJ_T0095454.1 MGP_129S1SvImJ_G0035514.1 mouse_genomes_project X 2218351 2248137 + MGP_129S1SvImJ_P0095454 Cacna1f protein_coding protein_coding MGP_129S1SvImJ_T0095455.1 MGP_129S1SvImJ_G0035514.1 mouse_genomes_project X 2218372 2232086 + MGP_129S1SvImJ_P0095455 Cacna1f protein_coding protein_coding MGP_129S1SvImJ_T0095456.1 MGP_129S1SvImJ_G0035514.1 mouse_genomes_project X 2218381 2248137 + MGP_129S1SvImJ_P0095456 Cacna1f protein_coding protein_coding MGP_129S1SvImJ_T0095457.1 MGP_129S1SvImJ_G0035514.1 mouse_genomes_project X 2218396 2248135 + Cacna1f protein_coding retained_intron MGP_129S1SvImJ_T0095458.1 MGP_129S1SvImJ_G0035514.1 mouse_genomes_project X 2239170 2240882 + Cacna1f protein_coding retained_intron MGP_129S1SvImJ_T0095459.1 MGP_129S1SvImJ_G0035514.1 mouse_genomes_project X 2240134 2243440 + MGP_129S1SvImJ_P0095459 Cacna1f protein_coding protein_coding MGP_129S1SvImJ_T0095460.1 MGP_129S1SvImJ_G0035514.1 mouse_genomes_project X 2240134 2243187 + MGP_129S1SvImJ_P0095460 Cacna1f protein_coding protein_coding MGP_129S1SvImJ_T0095461.1 MGP_129S1SvImJ_G0035514.1 mouse_genomes_project X 2241129 2242703 + Cacna1f protein_coding retained_intron MGP_129S1SvImJ_T0095462.1 MGP_129S1SvImJ_G0035514.1 mouse_genomes_project X 2244216 2245930 + Cacna1f protein_coding retained_intron MGP_129S1SvImJ_T0095883.1 MGP_129S1SvImJ_G0035633.1 mouse_genomes_project X 32100451 32118618 - MGP_129S1SvImJ_P0095883 Akap14 protein_coding protein_coding MGP_129S1SvImJ_T0096067.1 MGP_129S1SvImJ_G0035698.1 mouse_genomes_project X 43884117 43897088 + MGP_129S1SvImJ_P0096067 Rbmx2 protein_coding protein_coding MGP_129S1SvImJ_T0096068.1 MGP_129S1SvImJ_G0035698.1 mouse_genomes_project X 43890373 43892997 + Rbmx2 protein_coding processed_transcript MGP_129S1SvImJ_T0096268.1 MGP_129S1SvImJ_G0035777.1 mouse_genomes_project X 66001963 66005503 + MGP_129S1SvImJ_P0096268 1110012L19Rik protein_coding protein_coding MGP_129S1SvImJ_T0095463.1 MGP_129S1SvImJ_G0035515.1 mouse_genomes_project X 2251411 2266725 + MGP_129S1SvImJ_P0095463 Syp protein_coding protein_coding MGP_129S1SvImJ_T0095464.1 MGP_129S1SvImJ_G0035515.1 mouse_genomes_project X 2251578 2260810 + Syp protein_coding retained_intron MGP_129S1SvImJ_T0095465.1 MGP_129S1SvImJ_G0035515.1 mouse_genomes_project X 2251662 2257735 + MGP_129S1SvImJ_P0095465 Syp protein_coding protein_coding MGP_129S1SvImJ_T0095466.1 MGP_129S1SvImJ_G0035515.1 mouse_genomes_project X 2252245 2257724 + Syp protein_coding processed_transcript MGP_129S1SvImJ_T0095467.1 MGP_129S1SvImJ_G0035515.1 mouse_genomes_project X 2252701 2257683 + Syp protein_coding retained_intron MGP_129S1SvImJ_T0095468.1 MGP_129S1SvImJ_G0035515.1 mouse_genomes_project X 2257349 2258474 + Syp protein_coding retained_intron MGP_129S1SvImJ_T0100265.1 MGP_129S1SvImJ_G0038332.1 mouse_genomes_project X 100695783 100695890 - Gm23378 snRNA snRNA MGP_129S1SvImJ_T0097849.1 MGP_129S1SvImJ_G0036189.1 mouse_genomes_project X 150589152 150607533 + Gpr143 protein_coding processed_transcript MGP_129S1SvImJ_T0097850.1 MGP_129S1SvImJ_G0036189.1 mouse_genomes_project X 150589217 150621980 + MGP_129S1SvImJ_P0097850 Gpr143 protein_coding protein_coding MGP_129S1SvImJ_T0097851.1 MGP_129S1SvImJ_G0036189.1 mouse_genomes_project X 150589249 150600303 + Gpr143 protein_coding retained_intron MGP_129S1SvImJ_T0096323.1 MGP_129S1SvImJ_G0035791.1 mouse_genomes_project X 67928904 67947700 - MGP_129S1SvImJ_P0096323 Gabre protein_coding protein_coding MGP_129S1SvImJ_T0096324.1 MGP_129S1SvImJ_G0035791.1 mouse_genomes_project X 67934275 67942673 - Gabre protein_coding processed_transcript MGP_129S1SvImJ_T0096325.1 MGP_129S1SvImJ_G0035791.1 mouse_genomes_project X 67941877 67947700 - Gabre protein_coding retained_intron MGP_129S1SvImJ_T0016710.1 MGP_129S1SvImJ_G0014799.1 mouse_genomes_project X 123295012 123295675 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097731.1 MGP_129S1SvImJ_G0036171.1 mouse_genomes_project X 148373687 148385548 - MGP_129S1SvImJ_P0097731 Tro protein_coding protein_coding MGP_129S1SvImJ_T0097732.1 MGP_129S1SvImJ_G0036171.1 mouse_genomes_project X 148373687 148385401 - MGP_129S1SvImJ_P0097732 Tro protein_coding protein_coding MGP_129S1SvImJ_T0097733.1 MGP_129S1SvImJ_G0036171.1 mouse_genomes_project X 148373691 148385364 - MGP_129S1SvImJ_P0097733 Tro protein_coding protein_coding MGP_129S1SvImJ_T0097734.1 MGP_129S1SvImJ_G0036171.1 mouse_genomes_project X 148373691 148385364 - MGP_129S1SvImJ_P0097734 Tro protein_coding protein_coding MGP_129S1SvImJ_T0097735.1 MGP_129S1SvImJ_G0036171.1 mouse_genomes_project X 148373691 148385401 - MGP_129S1SvImJ_P0097735 Tro protein_coding protein_coding MGP_129S1SvImJ_T0097736.1 MGP_129S1SvImJ_G0036171.1 mouse_genomes_project X 148373809 148384042 - MGP_129S1SvImJ_P0097736 Tro protein_coding protein_coding MGP_129S1SvImJ_T0097737.1 MGP_129S1SvImJ_G0036171.1 mouse_genomes_project X 148377425 148379785 - Tro protein_coding retained_intron MGP_129S1SvImJ_T0097738.1 MGP_129S1SvImJ_G0036171.1 mouse_genomes_project X 148377578 148385364 - MGP_129S1SvImJ_P0097738 Tro protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097739.1 MGP_129S1SvImJ_G0036171.1 mouse_genomes_project X 148377702 148379834 - Tro protein_coding retained_intron MGP_129S1SvImJ_T0097740.1 MGP_129S1SvImJ_G0036171.1 mouse_genomes_project X 148379418 148380961 - Tro protein_coding retained_intron MGP_129S1SvImJ_T0097741.1 MGP_129S1SvImJ_G0036171.1 mouse_genomes_project X 148381499 148385337 - MGP_129S1SvImJ_P0097741 Tro protein_coding protein_coding MGP_129S1SvImJ_T0011241.1 MGP_129S1SvImJ_G0009357.1 mouse_genomes_project X 144680317 144680415 + Mir1298 miRNA miRNA MGP_129S1SvImJ_T0097303.1 MGP_129S1SvImJ_G0036044.1 mouse_genomes_project X 116789948 116793452 + MGP_129S1SvImJ_P0097303 Pabpc5 protein_coding protein_coding MGP_129S1SvImJ_T0097304.1 MGP_129S1SvImJ_G0036044.1 mouse_genomes_project X 116789977 116793296 + MGP_129S1SvImJ_P0097304 Pabpc5 protein_coding protein_coding MGP_129S1SvImJ_T0016501.1 MGP_129S1SvImJ_G0014590.1 mouse_genomes_project X 85647002 85647342 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016865.1 MGP_129S1SvImJ_G0014954.1 mouse_genomes_project X 154665393 154665676 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096876.1 MGP_129S1SvImJ_G0035917.1 mouse_genomes_project X 91753561 91780375 - MGP_129S1SvImJ_P0096876 Amer1 protein_coding protein_coding MGP_129S1SvImJ_T0100293.1 MGP_129S1SvImJ_G0038360.1 mouse_genomes_project X 152577103 152577211 + Gm22359 snRNA snRNA MGP_129S1SvImJ_T0018708.1 MGP_129S1SvImJ_G0015794.1 mouse_genomes_project X 134152874 134169177 + BC065397 processed_transcript processed_transcript MGP_129S1SvImJ_T0018709.1 MGP_129S1SvImJ_G0015794.1 mouse_genomes_project X 134152896 134170876 + BC065397 processed_transcript processed_transcript MGP_129S1SvImJ_T0018710.1 MGP_129S1SvImJ_G0015794.1 mouse_genomes_project X 134152908 134155636 + BC065397 processed_transcript processed_transcript MGP_129S1SvImJ_T0018711.1 MGP_129S1SvImJ_G0015794.1 mouse_genomes_project X 134152938 134169155 + BC065397 processed_transcript processed_transcript MGP_129S1SvImJ_T0018712.1 MGP_129S1SvImJ_G0015794.1 mouse_genomes_project X 134154026 134215350 + BC065397 processed_transcript processed_transcript MGP_129S1SvImJ_T0018713.1 MGP_129S1SvImJ_G0015794.1 mouse_genomes_project X 134154447 134169192 + BC065397 processed_transcript processed_transcript MGP_129S1SvImJ_T0018714.1 MGP_129S1SvImJ_G0015794.1 mouse_genomes_project X 134176602 134215359 + BC065397 processed_transcript processed_transcript MGP_129S1SvImJ_T0097334.1 MGP_129S1SvImJ_G0036056.1 mouse_genomes_project X 131001736 131016407 + MGP_129S1SvImJ_P0097334 Tnmd protein_coding protein_coding MGP_129S1SvImJ_T0009453.1 MGP_129S1SvImJ_G0007579.1 mouse_genomes_project X 165250156 165264868 - Gm15232 lincRNA lincRNA MGP_129S1SvImJ_T0096042.1 MGP_129S1SvImJ_G0035692.1 mouse_genomes_project X 43572551 43616960 - MGP_129S1SvImJ_P0096042 Elf4 protein_coding protein_coding MGP_129S1SvImJ_T0096043.1 MGP_129S1SvImJ_G0035692.1 mouse_genomes_project X 43572554 43625929 - MGP_129S1SvImJ_P0096043 Elf4 protein_coding protein_coding MGP_129S1SvImJ_T0096044.1 MGP_129S1SvImJ_G0035692.1 mouse_genomes_project X 43578157 43625929 - MGP_129S1SvImJ_P0096044 Elf4 protein_coding protein_coding MGP_129S1SvImJ_T0016694.1 MGP_129S1SvImJ_G0014783.1 mouse_genomes_project X 117191184 117191520 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016321.1 MGP_129S1SvImJ_G0014410.1 mouse_genomes_project X 43452863 43453211 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016538.1 MGP_129S1SvImJ_G0014627.1 mouse_genomes_project X 91201044 91202460 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016584.1 MGP_129S1SvImJ_G0014673.1 mouse_genomes_project X 99624963 99626270 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018673.1 MGP_129S1SvImJ_G0015784.1 mouse_genomes_project X 71563937 71566638 - processed_transcript processed_transcript MGP_129S1SvImJ_T0101790.1 MGP_129S1SvImJ_G0039761.1 mouse_genomes_project X 5157115 5159054 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101791.1 MGP_129S1SvImJ_G0039761.1 mouse_genomes_project X 5158458 5158949 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0097276.1 MGP_129S1SvImJ_G0036033.1 mouse_genomes_project X 109252360 109318853 + MGP_129S1SvImJ_P0097276 2010106E10Rik protein_coding protein_coding MGP_129S1SvImJ_T0097277.1 MGP_129S1SvImJ_G0036033.1 mouse_genomes_project X 109252361 109318843 + MGP_129S1SvImJ_P0097277 2010106E10Rik protein_coding protein_coding MGP_129S1SvImJ_T0095875.1 MGP_129S1SvImJ_G0035630.1 mouse_genomes_project X 32029579 32032462 - MGP_129S1SvImJ_P0095875 Rpl39 protein_coding protein_coding MGP_129S1SvImJ_T0095876.1 MGP_129S1SvImJ_G0035630.1 mouse_genomes_project X 32030702 32032226 - Rpl39 protein_coding retained_intron MGP_129S1SvImJ_T0095877.1 MGP_129S1SvImJ_G0035630.1 mouse_genomes_project X 32031596 32032216 - Rpl39 protein_coding retained_intron MGP_129S1SvImJ_T0009430.1 MGP_129S1SvImJ_G0007565.1 mouse_genomes_project X 137711449 137813419 - Gm15046 lincRNA lincRNA MGP_129S1SvImJ_T0016804.1 MGP_129S1SvImJ_G0014893.1 mouse_genomes_project X 141789771 141790081 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005600.1 MGP_129S1SvImJ_G0004721.1 mouse_genomes_project X 41392273 41447047 - 4930515L19Rik antisense antisense MGP_129S1SvImJ_T0016745.1 MGP_129S1SvImJ_G0014834.1 mouse_genomes_project X 132957674 132958417 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016404.1 MGP_129S1SvImJ_G0014493.1 mouse_genomes_project X 64204019 64204367 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009420.1 MGP_129S1SvImJ_G0007558.1 mouse_genomes_project X 102115053 102157058 - 5330434G04Rik lincRNA lincRNA MGP_129S1SvImJ_T0009421.1 MGP_129S1SvImJ_G0007558.1 mouse_genomes_project X 102117131 102157058 - 5330434G04Rik lincRNA lincRNA MGP_129S1SvImJ_T0009422.1 MGP_129S1SvImJ_G0007558.1 mouse_genomes_project X 102139740 102157036 - 5330434G04Rik lincRNA lincRNA MGP_129S1SvImJ_T0009423.1 MGP_129S1SvImJ_G0007558.1 mouse_genomes_project X 102142408 102153196 - 5330434G04Rik lincRNA lincRNA MGP_129S1SvImJ_T0096726.1 MGP_129S1SvImJ_G0035867.1 mouse_genomes_project X 72275254 72279879 + MGP_129S1SvImJ_P0096726 Cldn34b4 protein_coding protein_coding MGP_129S1SvImJ_T0096727.1 MGP_129S1SvImJ_G0035867.1 mouse_genomes_project X 72275356 72279788 + MGP_129S1SvImJ_P0096727 Cldn34b4 protein_coding protein_coding MGP_129S1SvImJ_T0016637.1 MGP_129S1SvImJ_G0014726.1 mouse_genomes_project X 105850616 105851428 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096051.1 MGP_129S1SvImJ_G0035695.1 mouse_genomes_project X 43707098 43757822 - MGP_129S1SvImJ_P0096051 Zfp280c protein_coding protein_coding MGP_129S1SvImJ_T0096052.1 MGP_129S1SvImJ_G0035695.1 mouse_genomes_project X 43707098 43760130 - MGP_129S1SvImJ_P0096052 Zfp280c protein_coding protein_coding MGP_129S1SvImJ_T0096053.1 MGP_129S1SvImJ_G0035695.1 mouse_genomes_project X 43707099 43760051 - MGP_129S1SvImJ_P0096053 Zfp280c protein_coding protein_coding MGP_129S1SvImJ_T0096054.1 MGP_129S1SvImJ_G0035695.1 mouse_genomes_project X 43707100 43757450 - MGP_129S1SvImJ_P0096054 Zfp280c protein_coding protein_coding MGP_129S1SvImJ_T0096055.1 MGP_129S1SvImJ_G0035695.1 mouse_genomes_project X 43708231 43709178 - Zfp280c protein_coding retained_intron MGP_129S1SvImJ_T0096056.1 MGP_129S1SvImJ_G0035695.1 mouse_genomes_project X 43744110 43760069 - Zfp280c protein_coding processed_transcript MGP_129S1SvImJ_T0096057.1 MGP_129S1SvImJ_G0035695.1 mouse_genomes_project X 43751783 43760182 - Zfp280c protein_coding processed_transcript MGP_129S1SvImJ_T0095722.1 MGP_129S1SvImJ_G0035583.1 mouse_genomes_project X 12430861 12444588 - Fundc1 protein_coding processed_transcript MGP_129S1SvImJ_T0095723.1 MGP_129S1SvImJ_G0035583.1 mouse_genomes_project X 12430861 12445217 - MGP_129S1SvImJ_P0095723 Fundc1 protein_coding protein_coding MGP_129S1SvImJ_T0095724.1 MGP_129S1SvImJ_G0035583.1 mouse_genomes_project X 12430897 12445266 - MGP_129S1SvImJ_P0095724 Fundc1 protein_coding protein_coding MGP_129S1SvImJ_T0097115.1 MGP_129S1SvImJ_G0035977.1 mouse_genomes_project X 99381533 99388582 + MGP_129S1SvImJ_P0097115 1700031F05Rik protein_coding protein_coding MGP_129S1SvImJ_T0016490.1 MGP_129S1SvImJ_G0014579.1 mouse_genomes_project X 84601397 84601708 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101531.1 MGP_129S1SvImJ_G0039598.1 mouse_genomes_project X 100766452 100766590 - Gm22266 snoRNA snoRNA MGP_129S1SvImJ_T0016902.1 MGP_129S1SvImJ_G0014991.1 mouse_genomes_project X 160873145 160873587 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016231.1 MGP_129S1SvImJ_G0014320.1 mouse_genomes_project X 8816642 8822288 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096974.1 MGP_129S1SvImJ_G0035946.1 mouse_genomes_project X 97082381 97085437 - Pdzd11 protein_coding retained_intron MGP_129S1SvImJ_T0096975.1 MGP_129S1SvImJ_G0035946.1 mouse_genomes_project X 97082384 97086067 - MGP_129S1SvImJ_P0096975 Pdzd11 protein_coding protein_coding MGP_129S1SvImJ_T0096976.1 MGP_129S1SvImJ_G0035946.1 mouse_genomes_project X 97082406 97085434 - MGP_129S1SvImJ_P0096976 Pdzd11 protein_coding protein_coding MGP_129S1SvImJ_T0096977.1 MGP_129S1SvImJ_G0035946.1 mouse_genomes_project X 97082875 97085770 - Pdzd11 protein_coding processed_transcript MGP_129S1SvImJ_T0096820.1 MGP_129S1SvImJ_G0035905.1 mouse_genomes_project X 90130703 90202924 - MGP_129S1SvImJ_P0096820 Pdk3 protein_coding protein_coding MGP_129S1SvImJ_T0096821.1 MGP_129S1SvImJ_G0035905.1 mouse_genomes_project X 90131192 90135217 - Pdk3 protein_coding processed_transcript MGP_129S1SvImJ_T0096822.1 MGP_129S1SvImJ_G0035905.1 mouse_genomes_project X 90152675 90159851 - Pdk3 protein_coding processed_transcript MGP_129S1SvImJ_T0095733.1 MGP_129S1SvImJ_G0035587.1 mouse_genomes_project X 14922002 14966445 + MGP_129S1SvImJ_P0095733 Chst7 protein_coding protein_coding MGP_129S1SvImJ_T0016883.1 MGP_129S1SvImJ_G0014972.1 mouse_genomes_project X 156981519 156982317 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011156.1 MGP_129S1SvImJ_G0009272.1 mouse_genomes_project X 36993711 36993838 + Gm44490 miRNA miRNA MGP_129S1SvImJ_T0095441.1 MGP_129S1SvImJ_G0035511.1 mouse_genomes_project X 2167413 2184366 - MGP_129S1SvImJ_P0095441 Ppp1r3f protein_coding protein_coding MGP_129S1SvImJ_T0095442.1 MGP_129S1SvImJ_G0035511.1 mouse_genomes_project X 2169069 2184331 - MGP_129S1SvImJ_P0095442 Ppp1r3f protein_coding protein_coding MGP_129S1SvImJ_T0095443.1 MGP_129S1SvImJ_G0035511.1 mouse_genomes_project X 2169339 2174325 - Ppp1r3f protein_coding processed_transcript MGP_129S1SvImJ_T0095444.1 MGP_129S1SvImJ_G0035511.1 mouse_genomes_project X 2170359 2182926 - MGP_129S1SvImJ_P0095444 Ppp1r3f protein_coding protein_coding MGP_129S1SvImJ_T0095445.1 MGP_129S1SvImJ_G0035511.1 mouse_genomes_project X 2172347 2174356 - Ppp1r3f protein_coding processed_transcript MGP_129S1SvImJ_T0018717.1 MGP_129S1SvImJ_G0015796.1 mouse_genomes_project X 150134959 150172301 + 3010001F23Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018718.1 MGP_129S1SvImJ_G0015796.1 mouse_genomes_project X 150135773 150154792 + 3010001F23Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0009373.1 MGP_129S1SvImJ_G0007528.1 mouse_genomes_project X 9700567 9744570 + Gm14505 lincRNA lincRNA MGP_129S1SvImJ_T0002504.1 MGP_129S1SvImJ_G0002413.1 mouse_genomes_project X 131933911 131935337 - TEC TEC MGP_129S1SvImJ_T0016392.1 MGP_129S1SvImJ_G0014481.1 mouse_genomes_project X 62337664 62338857 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016552.1 MGP_129S1SvImJ_G0014641.1 mouse_genomes_project X 93366038 93366430 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016338.1 MGP_129S1SvImJ_G0014427.1 mouse_genomes_project X 48887713 48888273 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009427.1 MGP_129S1SvImJ_G0007562.1 mouse_genomes_project X 116599682 116601474 - Gm14929 lincRNA lincRNA MGP_129S1SvImJ_T0016591.1 MGP_129S1SvImJ_G0014680.1 mouse_genomes_project X 99925913 99926980 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096810.1 MGP_129S1SvImJ_G0035902.1 mouse_genomes_project X 89645819 89647757 + Arx protein_coding retained_intron MGP_129S1SvImJ_T0096811.1 MGP_129S1SvImJ_G0035902.1 mouse_genomes_project X 89645870 89657672 + MGP_129S1SvImJ_P0096811 Arx protein_coding protein_coding MGP_129S1SvImJ_T0096812.1 MGP_129S1SvImJ_G0035902.1 mouse_genomes_project X 89645884 89657377 + MGP_129S1SvImJ_P0096812 Arx protein_coding protein_coding MGP_129S1SvImJ_T0018720.1 MGP_129S1SvImJ_G0015798.1 mouse_genomes_project X 160749697 160751233 - Gm15201 processed_transcript processed_transcript MGP_129S1SvImJ_T0016722.1 MGP_129S1SvImJ_G0014811.1 mouse_genomes_project X 127622418 127623206 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097319.1 MGP_129S1SvImJ_G0036051.1 mouse_genomes_project X 124734901 124744139 - MGP_129S1SvImJ_P0097319 Cldn34c4 protein_coding protein_coding MGP_129S1SvImJ_T0097816.1 MGP_129S1SvImJ_G0036182.1 mouse_genomes_project X 149771656 149789456 + MGP_129S1SvImJ_P0097816 Smc1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097817.1 MGP_129S1SvImJ_G0036182.1 mouse_genomes_project X 149771656 149816041 + MGP_129S1SvImJ_P0097817 Smc1a protein_coding protein_coding MGP_129S1SvImJ_T0097818.1 MGP_129S1SvImJ_G0036182.1 mouse_genomes_project X 149789690 149791302 + Smc1a protein_coding retained_intron MGP_129S1SvImJ_T0097819.1 MGP_129S1SvImJ_G0036182.1 mouse_genomes_project X 149799964 149801272 + Smc1a protein_coding retained_intron MGP_129S1SvImJ_T0097820.1 MGP_129S1SvImJ_G0036182.1 mouse_genomes_project X 149811813 149812855 + Smc1a protein_coding retained_intron MGP_129S1SvImJ_T0097821.1 MGP_129S1SvImJ_G0036182.1 mouse_genomes_project X 149812421 149813127 + Smc1a protein_coding retained_intron MGP_129S1SvImJ_T0097377.1 MGP_129S1SvImJ_G0036068.1 mouse_genomes_project X 131641355 131657722 - MGP_129S1SvImJ_P0097377 Taf7l protein_coding protein_coding MGP_129S1SvImJ_T0097378.1 MGP_129S1SvImJ_G0036068.1 mouse_genomes_project X 131641795 131656226 - MGP_129S1SvImJ_P0097378 Taf7l protein_coding protein_coding MGP_129S1SvImJ_T0097379.1 MGP_129S1SvImJ_G0036068.1 mouse_genomes_project X 131651107 131656221 - Taf7l protein_coding processed_transcript MGP_129S1SvImJ_T0016706.1 MGP_129S1SvImJ_G0014795.1 mouse_genomes_project X 119101283 119101579 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009403.1 MGP_129S1SvImJ_G0007551.1 mouse_genomes_project X 95834629 95874475 - Gm14812 lincRNA lincRNA MGP_129S1SvImJ_T0096004.1 MGP_129S1SvImJ_G0035682.1 mouse_genomes_project X 40158921 40160809 + MGP_129S1SvImJ_P0096004 Prr32 protein_coding protein_coding MGP_129S1SvImJ_T0101805.1 MGP_129S1SvImJ_G0039770.1 mouse_genomes_project X 100181039 100182789 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0098077.1 MGP_129S1SvImJ_G0036255.1 mouse_genomes_project X 162459361 162494037 + MGP_129S1SvImJ_P0098077 Vegfd protein_coding protein_coding MGP_129S1SvImJ_T0098078.1 MGP_129S1SvImJ_G0036255.1 mouse_genomes_project X 162481964 162491505 + Vegfd protein_coding retained_intron MGP_129S1SvImJ_T0016563.1 MGP_129S1SvImJ_G0014652.1 mouse_genomes_project X 96604912 96605234 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101561.1 MGP_129S1SvImJ_G0039628.1 mouse_genomes_project X 165543396 165543514 - Gm26368 snoRNA snoRNA MGP_129S1SvImJ_T0096857.1 MGP_129S1SvImJ_G0035913.1 mouse_genomes_project X 91062104 91064595 + MGP_129S1SvImJ_P0096857 Gspt2 protein_coding protein_coding MGP_129S1SvImJ_T0096858.1 MGP_129S1SvImJ_G0035913.1 mouse_genomes_project X 91062111 91069280 + MGP_129S1SvImJ_P0096858 Gspt2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0098147.1 MGP_129S1SvImJ_G0036273.1 mouse_genomes_project X 165640333 166324459 - MGP_129S1SvImJ_P0098147 Frmpd4 protein_coding protein_coding MGP_129S1SvImJ_T0098148.1 MGP_129S1SvImJ_G0036273.1 mouse_genomes_project X 165640333 166780689 - MGP_129S1SvImJ_P0098148 Frmpd4 protein_coding protein_coding MGP_129S1SvImJ_T0098149.1 MGP_129S1SvImJ_G0036273.1 mouse_genomes_project X 165640337 166089056 - MGP_129S1SvImJ_P0098149 Frmpd4 protein_coding protein_coding MGP_129S1SvImJ_T0098150.1 MGP_129S1SvImJ_G0036273.1 mouse_genomes_project X 165644322 165915653 - MGP_129S1SvImJ_P0098150 Frmpd4 protein_coding protein_coding MGP_129S1SvImJ_T0016843.1 MGP_129S1SvImJ_G0014932.1 mouse_genomes_project X 150343736 150344644 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097299.1 MGP_129S1SvImJ_G0036040.1 mouse_genomes_project X 111678090 111679019 + MGP_129S1SvImJ_P0097299 Ube2dnl2 protein_coding protein_coding MGP_129S1SvImJ_T0018704.1 MGP_129S1SvImJ_G0015792.1 mouse_genomes_project X 132226993 132240398 - processed_transcript processed_transcript MGP_129S1SvImJ_T0018705.1 MGP_129S1SvImJ_G0015792.1 mouse_genomes_project X 132227792 132249055 - processed_transcript processed_transcript MGP_129S1SvImJ_T0018706.1 MGP_129S1SvImJ_G0015792.1 mouse_genomes_project X 132232168 132240852 - processed_transcript processed_transcript MGP_129S1SvImJ_T0095582.1 MGP_129S1SvImJ_G0035540.1 mouse_genomes_project X 2769521 2779025 - MGP_129S1SvImJ_P0095582 Wdr13 protein_coding protein_coding MGP_129S1SvImJ_T0095583.1 MGP_129S1SvImJ_G0035540.1 mouse_genomes_project X 2769523 2779075 - MGP_129S1SvImJ_P0095583 Wdr13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095584.1 MGP_129S1SvImJ_G0035540.1 mouse_genomes_project X 2769544 2778987 - MGP_129S1SvImJ_P0095584 Wdr13 protein_coding protein_coding MGP_129S1SvImJ_T0095585.1 MGP_129S1SvImJ_G0035540.1 mouse_genomes_project X 2771524 2779040 - MGP_129S1SvImJ_P0095585 Wdr13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095586.1 MGP_129S1SvImJ_G0035540.1 mouse_genomes_project X 2771628 2779037 - MGP_129S1SvImJ_P0095586 Wdr13 protein_coding protein_coding MGP_129S1SvImJ_T0095587.1 MGP_129S1SvImJ_G0035540.1 mouse_genomes_project X 2771921 2774736 - Wdr13 protein_coding retained_intron MGP_129S1SvImJ_T0095588.1 MGP_129S1SvImJ_G0035540.1 mouse_genomes_project X 2774252 2779036 - Wdr13 protein_coding processed_transcript MGP_129S1SvImJ_T0095589.1 MGP_129S1SvImJ_G0035540.1 mouse_genomes_project X 2775359 2779062 - MGP_129S1SvImJ_P0095589 Wdr13 protein_coding protein_coding MGP_129S1SvImJ_T0095590.1 MGP_129S1SvImJ_G0035540.1 mouse_genomes_project X 2775936 2778730 - Wdr13 protein_coding retained_intron MGP_129S1SvImJ_T0095591.1 MGP_129S1SvImJ_G0035540.1 mouse_genomes_project X 2778335 2779109 - Wdr13 protein_coding processed_transcript MGP_129S1SvImJ_T0097380.1 MGP_129S1SvImJ_G0036069.1 mouse_genomes_project X 131718204 131723885 - MGP_129S1SvImJ_P0097380 protein_coding protein_coding MGP_129S1SvImJ_T0095429.1 MGP_129S1SvImJ_G0035507.1 mouse_genomes_project X 1560124 1612660 - MGP_129S1SvImJ_P0095429 Ccnb3 protein_coding protein_coding MGP_129S1SvImJ_T0095430.1 MGP_129S1SvImJ_G0035507.1 mouse_genomes_project X 1560124 1624640 - MGP_129S1SvImJ_P0095430 Ccnb3 protein_coding protein_coding MGP_129S1SvImJ_T0100249.1 MGP_129S1SvImJ_G0038316.1 mouse_genomes_project X 55620485 55620592 + Gm22287 snRNA snRNA MGP_129S1SvImJ_T0011212.1 MGP_129S1SvImJ_G0009328.1 mouse_genomes_project X 92625768 92625878 + Mir223 miRNA miRNA MGP_129S1SvImJ_T0016380.1 MGP_129S1SvImJ_G0014469.1 mouse_genomes_project X 58125164 58125650 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011213.1 MGP_129S1SvImJ_G0009329.1 mouse_genomes_project X 95128961 95129059 - Gm27554 miRNA miRNA MGP_129S1SvImJ_T0096050.1 MGP_129S1SvImJ_G0035694.1 mouse_genomes_project X 43684806 43695742 + MGP_129S1SvImJ_P0096050 Rab33a protein_coding protein_coding MGP_129S1SvImJ_T0095496.1 MGP_129S1SvImJ_G0035522.1 mouse_genomes_project X 2346546 2356174 - MGP_129S1SvImJ_P0095496 Ccdc120 protein_coding protein_coding MGP_129S1SvImJ_T0095497.1 MGP_129S1SvImJ_G0035522.1 mouse_genomes_project X 2352793 2355043 - MGP_129S1SvImJ_P0095497 Ccdc120 protein_coding protein_coding MGP_129S1SvImJ_T0095498.1 MGP_129S1SvImJ_G0035522.1 mouse_genomes_project X 2353050 2356141 - Ccdc120 protein_coding processed_transcript MGP_129S1SvImJ_T0095499.1 MGP_129S1SvImJ_G0035522.1 mouse_genomes_project X 2353064 2355064 - Ccdc120 protein_coding processed_transcript MGP_129S1SvImJ_T0095500.1 MGP_129S1SvImJ_G0035522.1 mouse_genomes_project X 2353075 2356157 - Ccdc120 protein_coding processed_transcript MGP_129S1SvImJ_T0095501.1 MGP_129S1SvImJ_G0035522.1 mouse_genomes_project X 2353202 2355040 - Ccdc120 protein_coding processed_transcript MGP_129S1SvImJ_T0095502.1 MGP_129S1SvImJ_G0035522.1 mouse_genomes_project X 2353292 2366157 - Ccdc120 protein_coding processed_transcript MGP_129S1SvImJ_T0095503.1 MGP_129S1SvImJ_G0035522.1 mouse_genomes_project X 2353345 2366149 - Ccdc120 protein_coding processed_transcript MGP_129S1SvImJ_T0011207.1 MGP_129S1SvImJ_G0009323.1 mouse_genomes_project X 70116934 70117002 + Mir7092 miRNA miRNA MGP_129S1SvImJ_T0101560.1 MGP_129S1SvImJ_G0039627.1 mouse_genomes_project X 162369050 162369180 + Gm22023 snoRNA snoRNA MGP_129S1SvImJ_T0095793.1 MGP_129S1SvImJ_G0035601.1 mouse_genomes_project X 15836606 15853820 - MGP_129S1SvImJ_P0095793 Elk1 protein_coding protein_coding MGP_129S1SvImJ_T0095794.1 MGP_129S1SvImJ_G0035601.1 mouse_genomes_project X 15842932 15853820 - Elk1 protein_coding retained_intron MGP_129S1SvImJ_T0016788.1 MGP_129S1SvImJ_G0014877.1 mouse_genomes_project X 139362020 139362287 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002498.1 MGP_129S1SvImJ_G0002407.1 mouse_genomes_project X 37215232 37217666 - TEC TEC MGP_129S1SvImJ_T0095902.1 MGP_129S1SvImJ_G0035649.1 mouse_genomes_project X 32684230 32688460 - MGP_129S1SvImJ_P0095902 Rhox2a protein_coding protein_coding MGP_129S1SvImJ_T0016217.1 MGP_129S1SvImJ_G0014306.1 mouse_genomes_project X 6697079 6697278 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095841.1 MGP_129S1SvImJ_G0035618.1 mouse_genomes_project X 31234485 31253649 + Lonrf3 protein_coding retained_intron MGP_129S1SvImJ_T0095842.1 MGP_129S1SvImJ_G0035618.1 mouse_genomes_project X 31234485 31274550 + MGP_129S1SvImJ_P0095842 Lonrf3 protein_coding protein_coding MGP_129S1SvImJ_T0095843.1 MGP_129S1SvImJ_G0035618.1 mouse_genomes_project X 31235348 31252792 + MGP_129S1SvImJ_P0095843 Lonrf3 protein_coding protein_coding MGP_129S1SvImJ_T0102850.1 MGP_129S1SvImJ_G0040682.1 mouse_genomes_project X 53008216 53008360 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0011186.1 MGP_129S1SvImJ_G0009302.1 mouse_genomes_project X 62377770 62377848 - Mir880 miRNA miRNA MGP_129S1SvImJ_T0101535.1 MGP_129S1SvImJ_G0039602.1 mouse_genomes_project X 116364463 116364579 - Gm26182 snoRNA snoRNA MGP_129S1SvImJ_T0009394.1 MGP_129S1SvImJ_G0007543.1 mouse_genomes_project X 68678411 68678933 + Gm14684 lincRNA lincRNA MGP_129S1SvImJ_T0016879.1 MGP_129S1SvImJ_G0014968.1 mouse_genomes_project X 156151363 156151931 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098070.1 MGP_129S1SvImJ_G0036253.1 mouse_genomes_project X 162274260 162343576 - MGP_129S1SvImJ_P0098070 Bmx protein_coding protein_coding MGP_129S1SvImJ_T0098071.1 MGP_129S1SvImJ_G0036253.1 mouse_genomes_project X 162274773 162335763 - MGP_129S1SvImJ_P0098071 Bmx protein_coding protein_coding MGP_129S1SvImJ_T0097537.1 MGP_129S1SvImJ_G0036118.1 mouse_genomes_project X 136559118 136565079 - MGP_129S1SvImJ_P0097537 Serpina7 protein_coding protein_coding MGP_129S1SvImJ_T0097538.1 MGP_129S1SvImJ_G0036118.1 mouse_genomes_project X 136559118 136565077 - MGP_129S1SvImJ_P0097538 Serpina7 protein_coding protein_coding MGP_129S1SvImJ_T0097539.1 MGP_129S1SvImJ_G0036118.1 mouse_genomes_project X 136563347 136565098 - MGP_129S1SvImJ_P0097539 Serpina7 protein_coding protein_coding MGP_129S1SvImJ_T0096519.1 MGP_129S1SvImJ_G0035833.1 mouse_genomes_project X 69966823 69998218 + MGP_129S1SvImJ_P0096519 Tktl1 protein_coding protein_coding MGP_129S1SvImJ_T0096520.1 MGP_129S1SvImJ_G0035833.1 mouse_genomes_project X 69966854 69986766 + MGP_129S1SvImJ_P0096520 Tktl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0100286.1 MGP_129S1SvImJ_G0038353.1 mouse_genomes_project X 142717948 142718093 + Gm25097 snRNA snRNA MGP_129S1SvImJ_T0016184.1 MGP_129S1SvImJ_G0014273.1 mouse_genomes_project X 680337 680928 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016302.1 MGP_129S1SvImJ_G0014391.1 mouse_genomes_project X 37961926 37962317 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016279.1 MGP_129S1SvImJ_G0014368.1 mouse_genomes_project X 33756531 33756825 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095476.1 MGP_129S1SvImJ_G0035518.1 mouse_genomes_project X 2285824 2293896 - Magix protein_coding processed_transcript MGP_129S1SvImJ_T0095477.1 MGP_129S1SvImJ_G0035518.1 mouse_genomes_project X 2287286 2293734 - MGP_129S1SvImJ_P0095477 Magix protein_coding protein_coding MGP_129S1SvImJ_T0096769.1 MGP_129S1SvImJ_G0035886.1 mouse_genomes_project X 79455037 79456284 - MGP_129S1SvImJ_P0096769 Tsga8 protein_coding protein_coding MGP_129S1SvImJ_T0016330.1 MGP_129S1SvImJ_G0014419.1 mouse_genomes_project X 46384252 46384689 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016244.1 MGP_129S1SvImJ_G0014333.1 mouse_genomes_project X 13782422 13782828 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100240.1 MGP_129S1SvImJ_G0038307.1 mouse_genomes_project X 40896479 40896586 - Gm25078 snRNA snRNA MGP_129S1SvImJ_T0097150.1 MGP_129S1SvImJ_G0035998.1 mouse_genomes_project X 102531704 102542353 + MGP_129S1SvImJ_P0097150 Fgf16 protein_coding protein_coding MGP_129S1SvImJ_T0005625.1 MGP_129S1SvImJ_G0004743.1 mouse_genomes_project X 100075526 100130888 + Tsix antisense antisense MGP_129S1SvImJ_T0095424.1 MGP_129S1SvImJ_G0035504.1 mouse_genomes_project X 920583 927198 - MGP_129S1SvImJ_P0095424 Bmp15 protein_coding protein_coding MGP_129S1SvImJ_T0097139.1 MGP_129S1SvImJ_G0035990.1 mouse_genomes_project X 100984684 101132263 - MGP_129S1SvImJ_P0097139 Abcb7 protein_coding protein_coding MGP_129S1SvImJ_T0097140.1 MGP_129S1SvImJ_G0035990.1 mouse_genomes_project X 101048965 101132273 - Abcb7 protein_coding retained_intron MGP_129S1SvImJ_T0016532.1 MGP_129S1SvImJ_G0014621.1 mouse_genomes_project X 90832726 90833344 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016482.1 MGP_129S1SvImJ_G0014571.1 mouse_genomes_project X 81909434 81909693 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016861.1 MGP_129S1SvImJ_G0014950.1 mouse_genomes_project X 153404173 153405009 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016719.1 MGP_129S1SvImJ_G0014808.1 mouse_genomes_project X 126643364 126643687 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002502.1 MGP_129S1SvImJ_G0002411.1 mouse_genomes_project X 125416538 125418402 + TEC TEC MGP_129S1SvImJ_T0097621.1 MGP_129S1SvImJ_G0036146.1 mouse_genomes_project X 139365294 139367156 - Gm15294 protein_coding translated_processed_pseudogene MGP_129S1SvImJ_T0097622.1 MGP_129S1SvImJ_G0036146.1 mouse_genomes_project X 139366400 139366791 - MGP_129S1SvImJ_P0097622 Gm15294 protein_coding protein_coding MGP_129S1SvImJ_T0016286.1 MGP_129S1SvImJ_G0014375.1 mouse_genomes_project X 34803070 34803640 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097127.1 MGP_129S1SvImJ_G0035984.1 mouse_genomes_project X 100056852 100068437 + MGP_129S1SvImJ_P0097127 Tsx protein_coding protein_coding MGP_129S1SvImJ_T0102883.1 MGP_129S1SvImJ_G0040715.1 mouse_genomes_project X 152036959 152037442 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0011200.1 MGP_129S1SvImJ_G0009316.1 mouse_genomes_project X 67935132 67935217 - Mir452 miRNA miRNA MGP_129S1SvImJ_T0016621.1 MGP_129S1SvImJ_G0014710.1 mouse_genomes_project X 103447671 103448544 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016476.1 MGP_129S1SvImJ_G0014565.1 mouse_genomes_project X 81299703 81300818 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096320.1 MGP_129S1SvImJ_G0035789.1 mouse_genomes_project X 67674058 67692206 + MGP_129S1SvImJ_P0096320 Cnga2 protein_coding protein_coding MGP_129S1SvImJ_T0096321.1 MGP_129S1SvImJ_G0035789.1 mouse_genomes_project X 67674064 67683563 + Cnga2 protein_coding processed_transcript MGP_129S1SvImJ_T0016458.1 MGP_129S1SvImJ_G0014547.1 mouse_genomes_project X 74740113 74742987 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016613.1 MGP_129S1SvImJ_G0014702.1 mouse_genomes_project X 102094522 102095259 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016343.1 MGP_129S1SvImJ_G0014432.1 mouse_genomes_project X 51735036 51736703 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098061.1 MGP_129S1SvImJ_G0036250.1 mouse_genomes_project X 162144212 162149620 - MGP_129S1SvImJ_P0098061 Siah1b protein_coding protein_coding MGP_129S1SvImJ_T0098062.1 MGP_129S1SvImJ_G0036250.1 mouse_genomes_project X 162144212 162149649 - MGP_129S1SvImJ_P0098062 Siah1b protein_coding protein_coding MGP_129S1SvImJ_T0098063.1 MGP_129S1SvImJ_G0036250.1 mouse_genomes_project X 162144703 162149992 - MGP_129S1SvImJ_P0098063 Siah1b protein_coding protein_coding MGP_129S1SvImJ_T0098685.1 MGP_129S1SvImJ_G0036770.1 mouse_genomes_project X 82534703 82534822 - n-R5s10 rRNA rRNA MGP_129S1SvImJ_T0016366.1 MGP_129S1SvImJ_G0014455.1 mouse_genomes_project X 56367227 56367952 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016707.1 MGP_129S1SvImJ_G0014796.1 mouse_genomes_project X 119243358 119243694 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016846.1 MGP_129S1SvImJ_G0014935.1 mouse_genomes_project X 150917919 150918451 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005614.1 MGP_129S1SvImJ_G0004733.1 mouse_genomes_project X 71400088 71400796 + Gm15384 antisense antisense MGP_129S1SvImJ_T0100260.1 MGP_129S1SvImJ_G0038327.1 mouse_genomes_project X 95218095 95218202 + Gm26000 snRNA snRNA MGP_129S1SvImJ_T0097182.1 MGP_129S1SvImJ_G0036001.1 mouse_genomes_project X 102798755 102808847 + MGP_129S1SvImJ_P0097182 Cox7b protein_coding protein_coding MGP_129S1SvImJ_T0097183.1 MGP_129S1SvImJ_G0036001.1 mouse_genomes_project X 102798771 102799185 + Cox7b protein_coding processed_transcript MGP_129S1SvImJ_T0097184.1 MGP_129S1SvImJ_G0036001.1 mouse_genomes_project X 102805787 102808355 + Cox7b protein_coding retained_intron MGP_129S1SvImJ_T0016831.1 MGP_129S1SvImJ_G0014920.1 mouse_genomes_project X 148183729 148186160 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096230.1 MGP_129S1SvImJ_G0035761.1 mouse_genomes_project X 57119008 57120467 + MGP_129S1SvImJ_P0096230 Ldoc1 protein_coding protein_coding MGP_129S1SvImJ_T0011792.1 MGP_129S1SvImJ_G0009908.1 mouse_genomes_project X 126342084 126342362 - Gm22225 misc_RNA misc_RNA MGP_129S1SvImJ_T0009409.1 MGP_129S1SvImJ_G0007555.1 mouse_genomes_project X 100140266 100153139 + Jpx lincRNA lincRNA MGP_129S1SvImJ_T0009410.1 MGP_129S1SvImJ_G0007555.1 mouse_genomes_project X 100140285 100141329 + Jpx lincRNA lincRNA MGP_129S1SvImJ_T0009411.1 MGP_129S1SvImJ_G0007555.1 mouse_genomes_project X 100140478 100149946 + Jpx lincRNA lincRNA MGP_129S1SvImJ_T0009412.1 MGP_129S1SvImJ_G0007555.1 mouse_genomes_project X 100140503 100149667 + Jpx lincRNA lincRNA MGP_129S1SvImJ_T0016828.1 MGP_129S1SvImJ_G0014917.1 mouse_genomes_project X 145069569 145070527 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097194.1 MGP_129S1SvImJ_G0036005.1 mouse_genomes_project X 102999057 103010581 - MGP_129S1SvImJ_P0097194 Taf9b protein_coding protein_coding MGP_129S1SvImJ_T0097195.1 MGP_129S1SvImJ_G0036005.1 mouse_genomes_project X 102999057 103009324 - MGP_129S1SvImJ_P0097195 Taf9b protein_coding protein_coding MGP_129S1SvImJ_T0097196.1 MGP_129S1SvImJ_G0036005.1 mouse_genomes_project X 103007762 103010173 - MGP_129S1SvImJ_P0097196 Taf9b protein_coding protein_coding MGP_129S1SvImJ_T0011781.1 MGP_129S1SvImJ_G0009897.1 mouse_genomes_project X 97220870 97221198 + Gm22160 misc_RNA misc_RNA MGP_129S1SvImJ_T0102849.1 MGP_129S1SvImJ_G0040681.1 mouse_genomes_project X 41652278 41653049 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0095423.1 MGP_129S1SvImJ_G0035503.1 mouse_genomes_project X 775401 779731 - MGP_129S1SvImJ_P0095423 Nudt10 protein_coding protein_coding MGP_129S1SvImJ_T0018666.1 MGP_129S1SvImJ_G0015781.1 mouse_genomes_project X 56523226 56541896 + C230004F18Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018667.1 MGP_129S1SvImJ_G0015781.1 mouse_genomes_project X 56523226 56527343 + C230004F18Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018668.1 MGP_129S1SvImJ_G0015781.1 mouse_genomes_project X 56523226 56584373 + C230004F18Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018669.1 MGP_129S1SvImJ_G0015781.1 mouse_genomes_project X 56523226 56546560 + C230004F18Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018670.1 MGP_129S1SvImJ_G0015781.1 mouse_genomes_project X 56523238 56584373 + C230004F18Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0096962.1 MGP_129S1SvImJ_G0035942.1 mouse_genomes_project X 96978357 96999303 + Dgat2l6 protein_coding retained_intron MGP_129S1SvImJ_T0096963.1 MGP_129S1SvImJ_G0035942.1 mouse_genomes_project X 96978360 96999556 + MGP_129S1SvImJ_P0096963 Dgat2l6 protein_coding protein_coding MGP_129S1SvImJ_T0095580.1 MGP_129S1SvImJ_G0035539.1 mouse_genomes_project X 2721311 2732210 - MGP_129S1SvImJ_P0095580 Was protein_coding protein_coding MGP_129S1SvImJ_T0095581.1 MGP_129S1SvImJ_G0035539.1 mouse_genomes_project X 2727983 2730477 - Was protein_coding retained_intron MGP_129S1SvImJ_T0095913.1 MGP_129S1SvImJ_G0035658.1 mouse_genomes_project X 33005585 33010802 + MGP_129S1SvImJ_P0095913 Rhox10 protein_coding protein_coding MGP_129S1SvImJ_T0016795.1 MGP_129S1SvImJ_G0014884.1 mouse_genomes_project X 139912128 139912619 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096753.1 MGP_129S1SvImJ_G0035880.1 mouse_genomes_project X 74603280 74604919 + MGP_129S1SvImJ_P0096753 Fam47c protein_coding protein_coding MGP_129S1SvImJ_T0016811.1 MGP_129S1SvImJ_G0014900.1 mouse_genomes_project X 142409281 142409882 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097531.1 MGP_129S1SvImJ_G0036116.1 mouse_genomes_project X 135657399 135658815 - MGP_129S1SvImJ_P0097531 Tex13a protein_coding protein_coding MGP_129S1SvImJ_T0095638.1 MGP_129S1SvImJ_G0035557.1 mouse_genomes_project X 4391329 4400071 - MGP_129S1SvImJ_P0095638 Dynlt3 protein_coding protein_coding MGP_129S1SvImJ_T0095639.1 MGP_129S1SvImJ_G0035557.1 mouse_genomes_project X 4393069 4396685 - Dynlt3 protein_coding processed_transcript MGP_129S1SvImJ_T0095640.1 MGP_129S1SvImJ_G0035557.1 mouse_genomes_project X 4393340 4400071 - Dynlt3 protein_coding processed_transcript MGP_129S1SvImJ_T0095641.1 MGP_129S1SvImJ_G0035557.1 mouse_genomes_project X 4393402 4394422 - Dynlt3 protein_coding processed_transcript MGP_129S1SvImJ_T0097091.1 MGP_129S1SvImJ_G0035971.1 mouse_genomes_project X 98767913 98772367 - MGP_129S1SvImJ_P0097091 Rps4x protein_coding protein_coding MGP_129S1SvImJ_T0097092.1 MGP_129S1SvImJ_G0035971.1 mouse_genomes_project X 98768046 98769710 - Rps4x protein_coding retained_intron MGP_129S1SvImJ_T0097093.1 MGP_129S1SvImJ_G0035971.1 mouse_genomes_project X 98770599 98772309 - Rps4x protein_coding retained_intron MGP_129S1SvImJ_T0009413.1 MGP_129S1SvImJ_G0007556.1 mouse_genomes_project X 100225677 100291891 - Ftx lincRNA lincRNA MGP_129S1SvImJ_T0009414.1 MGP_129S1SvImJ_G0007556.1 mouse_genomes_project X 100227667 100283579 - Ftx lincRNA lincRNA MGP_129S1SvImJ_T0009415.1 MGP_129S1SvImJ_G0007556.1 mouse_genomes_project X 100234338 100291800 - Ftx lincRNA lincRNA MGP_129S1SvImJ_T0009416.1 MGP_129S1SvImJ_G0007556.1 mouse_genomes_project X 100234338 100283488 - Ftx lincRNA lincRNA MGP_129S1SvImJ_T0009417.1 MGP_129S1SvImJ_G0007556.1 mouse_genomes_project X 100274203 100291891 - Ftx lincRNA lincRNA MGP_129S1SvImJ_T0009418.1 MGP_129S1SvImJ_G0007556.1 mouse_genomes_project X 100274256 100290631 - Ftx lincRNA lincRNA MGP_129S1SvImJ_T0097112.1 MGP_129S1SvImJ_G0035976.1 mouse_genomes_project X 99303211 99311089 + MGP_129S1SvImJ_P0097112 Dmrtc1b protein_coding protein_coding MGP_129S1SvImJ_T0097113.1 MGP_129S1SvImJ_G0035976.1 mouse_genomes_project X 99306492 99311089 + MGP_129S1SvImJ_P0097113 Dmrtc1b protein_coding protein_coding MGP_129S1SvImJ_T0097114.1 MGP_129S1SvImJ_G0035976.1 mouse_genomes_project X 99306517 99311089 + MGP_129S1SvImJ_P0097114 Dmrtc1b protein_coding protein_coding MGP_129S1SvImJ_T0102879.1 MGP_129S1SvImJ_G0040711.1 mouse_genomes_project X 145367745 145368073 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0097274.1 MGP_129S1SvImJ_G0036032.1 mouse_genomes_project X 109146612 109164512 - MGP_129S1SvImJ_P0097274 Satl1 protein_coding protein_coding MGP_129S1SvImJ_T0097275.1 MGP_129S1SvImJ_G0036032.1 mouse_genomes_project X 109146614 109165469 - MGP_129S1SvImJ_P0097275 Satl1 protein_coding protein_coding MGP_129S1SvImJ_T0096266.1 MGP_129S1SvImJ_G0035776.1 mouse_genomes_project X 65951920 65975849 - MGP_129S1SvImJ_P0096266 Ids protein_coding protein_coding MGP_129S1SvImJ_T0096267.1 MGP_129S1SvImJ_G0035776.1 mouse_genomes_project X 65961089 65971852 - MGP_129S1SvImJ_P0096267 Ids protein_coding protein_coding MGP_129S1SvImJ_T0102855.1 MGP_129S1SvImJ_G0040687.1 mouse_genomes_project X 70791742 70791880 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0096000.1 MGP_129S1SvImJ_G0035679.1 mouse_genomes_project X 38681294 38683667 + MGP_129S1SvImJ_P0096000 Gm362 protein_coding protein_coding MGP_129S1SvImJ_T0100224.1 MGP_129S1SvImJ_G0038291.1 mouse_genomes_project X 6628694 6628801 + Gm26314 snRNA snRNA MGP_129S1SvImJ_T0005622.1 MGP_129S1SvImJ_G0004740.1 mouse_genomes_project X 95891197 95892926 + Gm14808 antisense antisense MGP_129S1SvImJ_T0011137.1 MGP_129S1SvImJ_G0009253.1 mouse_genomes_project X 1826290 1826382 - Mir500 miRNA miRNA MGP_129S1SvImJ_T0100292.1 MGP_129S1SvImJ_G0038359.1 mouse_genomes_project X 151754379 151754479 - Gm25895 snRNA snRNA MGP_129S1SvImJ_T0096804.1 MGP_129S1SvImJ_G0035897.1 mouse_genomes_project X 87162127 87163120 + MGP_129S1SvImJ_P0096804 Gm44 protein_coding protein_coding MGP_129S1SvImJ_T0096737.1 MGP_129S1SvImJ_G0035874.1 mouse_genomes_project X 73934756 73942553 - MGP_129S1SvImJ_P0096737 Obp1a protein_coding protein_coding MGP_129S1SvImJ_T0097320.1 MGP_129S1SvImJ_G0036052.1 mouse_genomes_project X 125416538 125418402 + MGP_129S1SvImJ_P0097320 Rbm31y protein_coding protein_coding MGP_129S1SvImJ_T0101559.1 MGP_129S1SvImJ_G0039626.1 mouse_genomes_project X 160763113 160763232 + Gm23786 snoRNA snoRNA MGP_129S1SvImJ_T0016630.1 MGP_129S1SvImJ_G0014719.1 mouse_genomes_project X 104114721 104115669 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098098.1 MGP_129S1SvImJ_G0036260.1 mouse_genomes_project X 163097408 163114913 + MGP_129S1SvImJ_P0098098 Fancb protein_coding protein_coding MGP_129S1SvImJ_T0098099.1 MGP_129S1SvImJ_G0036260.1 mouse_genomes_project X 163097408 163114913 + MGP_129S1SvImJ_P0098099 Fancb protein_coding protein_coding MGP_129S1SvImJ_T0098100.1 MGP_129S1SvImJ_G0036260.1 mouse_genomes_project X 163097528 163114916 + MGP_129S1SvImJ_P0098100 Fancb protein_coding protein_coding MGP_129S1SvImJ_T0097910.1 MGP_129S1SvImJ_G0036218.1 mouse_genomes_project X 155428849 155463260 - Mbtps2 protein_coding processed_transcript MGP_129S1SvImJ_T0097911.1 MGP_129S1SvImJ_G0036218.1 mouse_genomes_project X 155441234 155495592 - MGP_129S1SvImJ_P0097911 Mbtps2 protein_coding protein_coding MGP_129S1SvImJ_T0097912.1 MGP_129S1SvImJ_G0036218.1 mouse_genomes_project X 155460200 155495527 - MGP_129S1SvImJ_P0097912 Mbtps2 protein_coding protein_coding MGP_129S1SvImJ_T0097913.1 MGP_129S1SvImJ_G0036218.1 mouse_genomes_project X 155460201 155495527 - MGP_129S1SvImJ_P0097913 Mbtps2 protein_coding protein_coding MGP_129S1SvImJ_T0097915.1 MGP_129S1SvImJ_G0036218.1 mouse_genomes_project X 155463320 155474819 - Mbtps2 protein_coding processed_transcript MGP_129S1SvImJ_T0097916.1 MGP_129S1SvImJ_G0036218.1 mouse_genomes_project X 155466254 155495528 - Mbtps2 protein_coding retained_intron MGP_129S1SvImJ_T0097917.1 MGP_129S1SvImJ_G0036218.1 mouse_genomes_project X 155467983 155495556 - MGP_129S1SvImJ_P0097917 Mbtps2 protein_coding protein_coding MGP_129S1SvImJ_T0097918.1 MGP_129S1SvImJ_G0036218.1 mouse_genomes_project X 155486856 155495520 - Mbtps2 protein_coding retained_intron MGP_129S1SvImJ_T0016363.1 MGP_129S1SvImJ_G0014452.1 mouse_genomes_project X 56103739 56104799 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097090.1 MGP_129S1SvImJ_G0035970.1 mouse_genomes_project X 98721437 98738089 - MGP_129S1SvImJ_P0097090 Ercc6l protein_coding protein_coding MGP_129S1SvImJ_T0095554.1 MGP_129S1SvImJ_G0035530.1 mouse_genomes_project X 2525495 2534558 + MGP_129S1SvImJ_P0095554 Timm17b protein_coding protein_coding MGP_129S1SvImJ_T0095555.1 MGP_129S1SvImJ_G0035530.1 mouse_genomes_project X 2525809 2532537 + MGP_129S1SvImJ_P0095555 Timm17b protein_coding protein_coding MGP_129S1SvImJ_T0095556.1 MGP_129S1SvImJ_G0035530.1 mouse_genomes_project X 2532320 2533177 + Timm17b protein_coding retained_intron MGP_129S1SvImJ_T0018678.1 MGP_129S1SvImJ_G0015788.1 mouse_genomes_project X 101789749 101824357 - 5530601H04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018679.1 MGP_129S1SvImJ_G0015788.1 mouse_genomes_project X 101791360 101824307 - 5530601H04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018680.1 MGP_129S1SvImJ_G0015788.1 mouse_genomes_project X 101791369 101824303 - 5530601H04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018681.1 MGP_129S1SvImJ_G0015788.1 mouse_genomes_project X 101793378 101824385 - 5530601H04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018682.1 MGP_129S1SvImJ_G0015788.1 mouse_genomes_project X 101793925 101824385 - 5530601H04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018683.1 MGP_129S1SvImJ_G0015788.1 mouse_genomes_project X 101795183 101824348 - 5530601H04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018684.1 MGP_129S1SvImJ_G0015788.1 mouse_genomes_project X 101795795 101824304 - 5530601H04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018685.1 MGP_129S1SvImJ_G0015788.1 mouse_genomes_project X 101796327 101824316 - 5530601H04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018686.1 MGP_129S1SvImJ_G0015788.1 mouse_genomes_project X 101796525 101824296 - 5530601H04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018687.1 MGP_129S1SvImJ_G0015788.1 mouse_genomes_project X 101796600 101824369 - 5530601H04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018688.1 MGP_129S1SvImJ_G0015788.1 mouse_genomes_project X 101817106 101824365 - 5530601H04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018689.1 MGP_129S1SvImJ_G0015788.1 mouse_genomes_project X 101822125 101824355 - 5530601H04Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018690.1 MGP_129S1SvImJ_G0015788.1 mouse_genomes_project X 101823372 101834345 - 5530601H04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018691.1 MGP_129S1SvImJ_G0015788.1 mouse_genomes_project X 101829963 101830729 - 5530601H04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018692.1 MGP_129S1SvImJ_G0015788.1 mouse_genomes_project X 101830183 101834541 - 5530601H04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018693.1 MGP_129S1SvImJ_G0015788.1 mouse_genomes_project X 101832196 101834369 - 5530601H04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0016427.1 MGP_129S1SvImJ_G0014516.1 mouse_genomes_project X 70321499 70322084 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096299.1 MGP_129S1SvImJ_G0035783.1 mouse_genomes_project X 67069838 67145339 - MGP_129S1SvImJ_P0096299 Cd99l2 protein_coding protein_coding MGP_129S1SvImJ_T0096300.1 MGP_129S1SvImJ_G0035783.1 mouse_genomes_project X 67069838 67145135 - MGP_129S1SvImJ_P0096300 Cd99l2 protein_coding protein_coding MGP_129S1SvImJ_T0096301.1 MGP_129S1SvImJ_G0035783.1 mouse_genomes_project X 67069838 67145339 - MGP_129S1SvImJ_P0096301 Cd99l2 protein_coding protein_coding MGP_129S1SvImJ_T0096302.1 MGP_129S1SvImJ_G0035783.1 mouse_genomes_project X 67072400 67145339 - MGP_129S1SvImJ_P0096302 Cd99l2 protein_coding protein_coding MGP_129S1SvImJ_T0096303.1 MGP_129S1SvImJ_G0035783.1 mouse_genomes_project X 67089103 67145139 - Cd99l2 protein_coding retained_intron MGP_129S1SvImJ_T0096304.1 MGP_129S1SvImJ_G0035783.1 mouse_genomes_project X 67144388 67145095 - Cd99l2 protein_coding processed_transcript MGP_129S1SvImJ_T0095721.1 MGP_129S1SvImJ_G0035582.1 mouse_genomes_project X 12005547 12197850 - MGP_129S1SvImJ_P0095721 Efhc2 protein_coding protein_coding MGP_129S1SvImJ_T0101517.1 MGP_129S1SvImJ_G0039584.1 mouse_genomes_project X 69527394 69527517 + Gm25226 snoRNA snoRNA MGP_129S1SvImJ_T0005626.1 MGP_129S1SvImJ_G0004744.1 mouse_genomes_project X 139223434 139224760 + Gm15295 antisense antisense MGP_129S1SvImJ_T0095598.1 MGP_129S1SvImJ_G0035542.1 mouse_genomes_project X 2801973 2825268 - MGP_129S1SvImJ_P0095598 Tbc1d25 protein_coding protein_coding MGP_129S1SvImJ_T0095599.1 MGP_129S1SvImJ_G0035542.1 mouse_genomes_project X 2801973 2825268 - MGP_129S1SvImJ_P0095599 Tbc1d25 protein_coding protein_coding MGP_129S1SvImJ_T0095600.1 MGP_129S1SvImJ_G0035542.1 mouse_genomes_project X 2801984 2825045 - Tbc1d25 protein_coding retained_intron MGP_129S1SvImJ_T0095601.1 MGP_129S1SvImJ_G0035542.1 mouse_genomes_project X 2802206 2824920 - MGP_129S1SvImJ_P0095601 Tbc1d25 protein_coding protein_coding MGP_129S1SvImJ_T0096807.1 MGP_129S1SvImJ_G0035900.1 mouse_genomes_project X 87938164 87941640 + MGP_129S1SvImJ_P0096807 Gm14781 protein_coding protein_coding MGP_129S1SvImJ_T0102033.1 MGP_129S1SvImJ_G0039872.1 mouse_genomes_project X 99790196 99873357 - unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0102034.1 MGP_129S1SvImJ_G0039872.1 mouse_genomes_project X 99846534 99869790 - unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0102035.1 MGP_129S1SvImJ_G0039872.1 mouse_genomes_project X 99847822 99873349 - unitary_pseudogene retained_intron MGP_129S1SvImJ_T0102036.1 MGP_129S1SvImJ_G0039872.1 mouse_genomes_project X 99850769 99918639 - unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0102037.1 MGP_129S1SvImJ_G0039872.1 mouse_genomes_project X 99850780 99906999 - unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0096728.1 MGP_129S1SvImJ_G0035868.1 mouse_genomes_project X 72452701 72462525 - MGP_129S1SvImJ_P0096728 Cldn34d protein_coding protein_coding MGP_129S1SvImJ_T0096233.1 MGP_129S1SvImJ_G0035763.1 mouse_genomes_project X 57881016 57881838 + MGP_129S1SvImJ_P0096233 4931400O07Rik protein_coding protein_coding MGP_129S1SvImJ_T0096258.1 MGP_129S1SvImJ_G0035773.1 mouse_genomes_project X 64359316 64412711 + MGP_129S1SvImJ_P0096258 Fmr1nb protein_coding protein_coding MGP_129S1SvImJ_T0096259.1 MGP_129S1SvImJ_G0035773.1 mouse_genomes_project X 64359358 64412711 + MGP_129S1SvImJ_P0096259 Fmr1nb protein_coding protein_coding MGP_129S1SvImJ_T0096260.1 MGP_129S1SvImJ_G0035773.1 mouse_genomes_project X 64359411 64412711 + MGP_129S1SvImJ_P0096260 Fmr1nb protein_coding protein_coding MGP_129S1SvImJ_T0097551.1 MGP_129S1SvImJ_G0036123.1 mouse_genomes_project X 136972420 137053032 + MGP_129S1SvImJ_P0097551 D330045A20Rik protein_coding protein_coding MGP_129S1SvImJ_T0097552.1 MGP_129S1SvImJ_G0036123.1 mouse_genomes_project X 136972424 136989586 + D330045A20Rik protein_coding processed_transcript MGP_129S1SvImJ_T0097553.1 MGP_129S1SvImJ_G0036123.1 mouse_genomes_project X 136972424 137053032 + MGP_129S1SvImJ_P0097553 D330045A20Rik protein_coding protein_coding MGP_129S1SvImJ_T0097076.1 MGP_129S1SvImJ_G0035966.1 mouse_genomes_project X 98342170 98346785 + MGP_129S1SvImJ_P0097076 8030474K03Rik protein_coding protein_coding MGP_129S1SvImJ_T0100279.1 MGP_129S1SvImJ_G0038346.1 mouse_genomes_project X 124335470 124335575 + Gm22139 snRNA snRNA MGP_129S1SvImJ_T0016498.1 MGP_129S1SvImJ_G0014587.1 mouse_genomes_project X 85292316 85293482 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016224.1 MGP_129S1SvImJ_G0014313.1 mouse_genomes_project X 7779279 7780536 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016319.1 MGP_129S1SvImJ_G0014408.1 mouse_genomes_project X 42585056 42586061 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011793.1 MGP_129S1SvImJ_G0009909.1 mouse_genomes_project X 129807256 129807459 + Gm22143 misc_RNA misc_RNA MGP_129S1SvImJ_T0016756.1 MGP_129S1SvImJ_G0014845.1 mouse_genomes_project X 134519365 134519952 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018660.1 MGP_129S1SvImJ_G0015779.1 mouse_genomes_project X 48300011 48302157 - C430049B03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018661.1 MGP_129S1SvImJ_G0015779.1 mouse_genomes_project X 48300172 48302127 - C430049B03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018662.1 MGP_129S1SvImJ_G0015779.1 mouse_genomes_project X 48300735 48302155 - C430049B03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018663.1 MGP_129S1SvImJ_G0015779.1 mouse_genomes_project X 48301159 48302157 - C430049B03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0095844.1 MGP_129S1SvImJ_G0035619.1 mouse_genomes_project X 31316346 31317525 + MGP_129S1SvImJ_P0095844 protein_coding protein_coding MGP_129S1SvImJ_T0016820.1 MGP_129S1SvImJ_G0014909.1 mouse_genomes_project X 143629806 143630173 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097652.1 MGP_129S1SvImJ_G0036156.1 mouse_genomes_project X 141366624 141392165 - MGP_129S1SvImJ_P0097652 Capn6 protein_coding protein_coding MGP_129S1SvImJ_T0097653.1 MGP_129S1SvImJ_G0036156.1 mouse_genomes_project X 141380788 141392083 - Capn6 protein_coding retained_intron MGP_129S1SvImJ_T0016814.1 MGP_129S1SvImJ_G0014903.1 mouse_genomes_project X 143161586 143162768 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096120.1 MGP_129S1SvImJ_G0035719.1 mouse_genomes_project X 48228245 48266829 + MGP_129S1SvImJ_P0096120 Hprt protein_coding protein_coding MGP_129S1SvImJ_T0011170.1 MGP_129S1SvImJ_G0009286.1 mouse_genomes_project X 48298219 48298317 - Mir351 miRNA miRNA MGP_129S1SvImJ_T0011222.1 MGP_129S1SvImJ_G0009338.1 mouse_genomes_project X 102111053 102111141 - Mir384 miRNA miRNA MGP_129S1SvImJ_T0095884.1 MGP_129S1SvImJ_G0035634.1 mouse_genomes_project X 32137985 32141554 - MGP_129S1SvImJ_P0095884 Ndufa1 protein_coding protein_coding MGP_129S1SvImJ_T0097840.1 MGP_129S1SvImJ_G0036186.1 mouse_genomes_project X 150109763 150134636 - MGP_129S1SvImJ_P0097840 Gpr173 protein_coding protein_coding MGP_129S1SvImJ_T0097841.1 MGP_129S1SvImJ_G0036186.1 mouse_genomes_project X 150132947 150134636 - Gpr173 protein_coding processed_transcript MGP_129S1SvImJ_T0016671.1 MGP_129S1SvImJ_G0014760.1 mouse_genomes_project X 112348271 112355220 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100261.1 MGP_129S1SvImJ_G0038328.1 mouse_genomes_project X 97483947 97484010 + Gm24577 snRNA snRNA MGP_129S1SvImJ_T0097905.1 MGP_129S1SvImJ_G0036217.1 mouse_genomes_project X 155332158 155384386 - MGP_129S1SvImJ_P0097905 Sms protein_coding protein_coding MGP_129S1SvImJ_T0097906.1 MGP_129S1SvImJ_G0036217.1 mouse_genomes_project X 155333999 155384165 - MGP_129S1SvImJ_P0097906 Sms protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097907.1 MGP_129S1SvImJ_G0036217.1 mouse_genomes_project X 155347504 155352440 - Sms protein_coding retained_intron MGP_129S1SvImJ_T0097908.1 MGP_129S1SvImJ_G0036217.1 mouse_genomes_project X 155350452 155384143 - Sms protein_coding retained_intron MGP_129S1SvImJ_T0097909.1 MGP_129S1SvImJ_G0036217.1 mouse_genomes_project X 155357442 155383471 - MGP_129S1SvImJ_P0097909 Sms protein_coding protein_coding MGP_129S1SvImJ_T0098051.1 MGP_129S1SvImJ_G0036248.1 mouse_genomes_project X 162008793 162031916 - MGP_129S1SvImJ_P0098051 Zrsr2 protein_coding protein_coding MGP_129S1SvImJ_T0098052.1 MGP_129S1SvImJ_G0036248.1 mouse_genomes_project X 162012391 162023543 - Zrsr2 protein_coding retained_intron MGP_129S1SvImJ_T0098053.1 MGP_129S1SvImJ_G0036248.1 mouse_genomes_project X 162013294 162016803 - Zrsr2 protein_coding retained_intron MGP_129S1SvImJ_T0098054.1 MGP_129S1SvImJ_G0036248.1 mouse_genomes_project X 162022265 162023785 - Zrsr2 protein_coding retained_intron MGP_129S1SvImJ_T0098055.1 MGP_129S1SvImJ_G0036248.1 mouse_genomes_project X 162023712 162031925 - MGP_129S1SvImJ_P0098055 Zrsr2 protein_coding protein_coding MGP_129S1SvImJ_T0098056.1 MGP_129S1SvImJ_G0036248.1 mouse_genomes_project X 162026917 162031489 - Zrsr2 protein_coding processed_transcript MGP_129S1SvImJ_T0098057.1 MGP_129S1SvImJ_G0036248.1 mouse_genomes_project X 162026966 162031879 - MGP_129S1SvImJ_P0098057 Zrsr2 protein_coding protein_coding MGP_129S1SvImJ_T0098058.1 MGP_129S1SvImJ_G0036248.1 mouse_genomes_project X 162029798 162031988 - MGP_129S1SvImJ_P0098058 Zrsr2 protein_coding protein_coding MGP_129S1SvImJ_T0099053.1 MGP_129S1SvImJ_G0037120.1 mouse_genomes_project X 634544 701396 - Gm26618 sense_overlapping sense_overlapping MGP_129S1SvImJ_T0095776.1 MGP_129S1SvImJ_G0035597.1 mouse_genomes_project X 15690125 15755933 + MGP_129S1SvImJ_P0095776 Araf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095777.1 MGP_129S1SvImJ_G0035597.1 mouse_genomes_project X 15744133 15755955 + MGP_129S1SvImJ_P0095777 Araf protein_coding protein_coding MGP_129S1SvImJ_T0095778.1 MGP_129S1SvImJ_G0035597.1 mouse_genomes_project X 15744154 15750919 + Araf protein_coding retained_intron MGP_129S1SvImJ_T0095779.1 MGP_129S1SvImJ_G0035597.1 mouse_genomes_project X 15744156 15748331 + MGP_129S1SvImJ_P0095779 Araf protein_coding protein_coding MGP_129S1SvImJ_T0095780.1 MGP_129S1SvImJ_G0035597.1 mouse_genomes_project X 15744165 15749987 + Araf protein_coding processed_transcript MGP_129S1SvImJ_T0095781.1 MGP_129S1SvImJ_G0035597.1 mouse_genomes_project X 15744168 15748316 + MGP_129S1SvImJ_P0095781 Araf protein_coding protein_coding MGP_129S1SvImJ_T0095782.1 MGP_129S1SvImJ_G0035597.1 mouse_genomes_project X 15744172 15747144 + Araf protein_coding retained_intron MGP_129S1SvImJ_T0095783.1 MGP_129S1SvImJ_G0035597.1 mouse_genomes_project X 15744179 15748877 + MGP_129S1SvImJ_P0095783 Araf protein_coding protein_coding MGP_129S1SvImJ_T0095784.1 MGP_129S1SvImJ_G0035597.1 mouse_genomes_project X 15746556 15747641 + Araf protein_coding retained_intron MGP_129S1SvImJ_T0095785.1 MGP_129S1SvImJ_G0035597.1 mouse_genomes_project X 15748844 15755549 + MGP_129S1SvImJ_P0095785 Araf protein_coding unknown_likely_coding MGP_129S1SvImJ_T0095786.1 MGP_129S1SvImJ_G0035597.1 mouse_genomes_project X 15753158 15755644 + MGP_129S1SvImJ_P0095786 Araf protein_coding protein_coding MGP_129S1SvImJ_T0096074.1 MGP_129S1SvImJ_G0035701.1 mouse_genomes_project X 44635650 44668918 + MGP_129S1SvImJ_P0096074 Arhgap36 protein_coding protein_coding MGP_129S1SvImJ_T0096075.1 MGP_129S1SvImJ_G0035701.1 mouse_genomes_project X 44642163 44672653 + MGP_129S1SvImJ_P0096075 Arhgap36 protein_coding protein_coding MGP_129S1SvImJ_T0096076.1 MGP_129S1SvImJ_G0035701.1 mouse_genomes_project X 44642290 44672651 + MGP_129S1SvImJ_P0096076 Arhgap36 protein_coding protein_coding MGP_129S1SvImJ_T0096077.1 MGP_129S1SvImJ_G0035701.1 mouse_genomes_project X 44658043 44667659 + Arhgap36 protein_coding processed_transcript MGP_129S1SvImJ_T0096078.1 MGP_129S1SvImJ_G0035701.1 mouse_genomes_project X 44666285 44667864 + Arhgap36 protein_coding processed_transcript MGP_129S1SvImJ_T0097854.1 MGP_129S1SvImJ_G0036192.1 mouse_genomes_project X 150923781 150937882 + MGP_129S1SvImJ_P0097854 Foxr2 protein_coding protein_coding MGP_129S1SvImJ_T0097855.1 MGP_129S1SvImJ_G0036192.1 mouse_genomes_project X 150931915 150937882 + MGP_129S1SvImJ_P0097855 Foxr2 protein_coding protein_coding MGP_129S1SvImJ_T0011196.1 MGP_129S1SvImJ_G0009312.1 mouse_genomes_project X 63593590 63593668 - Mir547 miRNA miRNA MGP_129S1SvImJ_T0016665.1 MGP_129S1SvImJ_G0014754.1 mouse_genomes_project X 111629498 111629705 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016853.1 MGP_129S1SvImJ_G0014942.1 mouse_genomes_project X 152286927 152287574 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016631.1 MGP_129S1SvImJ_G0014720.1 mouse_genomes_project X 104185603 104186630 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097136.1 MGP_129S1SvImJ_G0035989.1 mouse_genomes_project X 100773580 100905508 - MGP_129S1SvImJ_P0097136 C77370 protein_coding protein_coding MGP_129S1SvImJ_T0097137.1 MGP_129S1SvImJ_G0035989.1 mouse_genomes_project X 100773581 100905440 - MGP_129S1SvImJ_P0097137 C77370 protein_coding protein_coding MGP_129S1SvImJ_T0097138.1 MGP_129S1SvImJ_G0035989.1 mouse_genomes_project X 100779860 100905467 - MGP_129S1SvImJ_P0097138 C77370 protein_coding protein_coding MGP_129S1SvImJ_T0016471.1 MGP_129S1SvImJ_G0014560.1 mouse_genomes_project X 78614091 78614893 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096205.1 MGP_129S1SvImJ_G0035753.1 mouse_genomes_project X 54241815 54252900 + MGP_129S1SvImJ_P0096205 4930550L24Rik protein_coding protein_coding MGP_129S1SvImJ_T0096206.1 MGP_129S1SvImJ_G0035753.1 mouse_genomes_project X 54243918 54252900 + MGP_129S1SvImJ_P0096206 4930550L24Rik protein_coding protein_coding MGP_129S1SvImJ_T0096805.1 MGP_129S1SvImJ_G0035898.1 mouse_genomes_project X 87598426 87602285 + MGP_129S1SvImJ_P0096805 protein_coding protein_coding MGP_129S1SvImJ_T0100254.1 MGP_129S1SvImJ_G0038321.1 mouse_genomes_project X 70827973 70828080 - Gm25629 snRNA snRNA MGP_129S1SvImJ_T0096013.1 MGP_129S1SvImJ_G0035685.1 mouse_genomes_project X 43031126 43084273 + MGP_129S1SvImJ_P0096013 Ocrl protein_coding protein_coding MGP_129S1SvImJ_T0096014.1 MGP_129S1SvImJ_G0035685.1 mouse_genomes_project X 43031177 43075497 + MGP_129S1SvImJ_P0096014 Ocrl protein_coding protein_coding MGP_129S1SvImJ_T0096015.1 MGP_129S1SvImJ_G0035685.1 mouse_genomes_project X 43031194 43075480 + Ocrl protein_coding processed_transcript MGP_129S1SvImJ_T0096016.1 MGP_129S1SvImJ_G0035685.1 mouse_genomes_project X 43031206 43034305 + Ocrl protein_coding retained_intron MGP_129S1SvImJ_T0096017.1 MGP_129S1SvImJ_G0035685.1 mouse_genomes_project X 43031691 43084278 + MGP_129S1SvImJ_P0096017 Ocrl protein_coding protein_coding MGP_129S1SvImJ_T0096018.1 MGP_129S1SvImJ_G0035685.1 mouse_genomes_project X 43048785 43049928 + Ocrl protein_coding retained_intron MGP_129S1SvImJ_T0096019.1 MGP_129S1SvImJ_G0035685.1 mouse_genomes_project X 43056996 43066878 + MGP_129S1SvImJ_P0096019 Ocrl protein_coding protein_coding MGP_129S1SvImJ_T0016345.1 MGP_129S1SvImJ_G0014434.1 mouse_genomes_project X 52997606 52998784 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102871.1 MGP_129S1SvImJ_G0040703.1 mouse_genomes_project X 99383863 99387083 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0016747.1 MGP_129S1SvImJ_G0014836.1 mouse_genomes_project X 133344092 133344812 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016890.1 MGP_129S1SvImJ_G0014979.1 mouse_genomes_project X 158189403 158189666 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016515.1 MGP_129S1SvImJ_G0014604.1 mouse_genomes_project X 87857040 87858187 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018694.1 MGP_129S1SvImJ_G0015789.1 mouse_genomes_project X 105675168 105727815 + processed_transcript processed_transcript MGP_129S1SvImJ_T0018695.1 MGP_129S1SvImJ_G0015789.1 mouse_genomes_project X 105675192 105727609 + processed_transcript processed_transcript MGP_129S1SvImJ_T0018696.1 MGP_129S1SvImJ_G0015789.1 mouse_genomes_project X 105675268 105821505 + processed_transcript processed_transcript MGP_129S1SvImJ_T0018697.1 MGP_129S1SvImJ_G0015789.1 mouse_genomes_project X 105675347 105727602 + processed_transcript processed_transcript MGP_129S1SvImJ_T0018698.1 MGP_129S1SvImJ_G0015789.1 mouse_genomes_project X 105675354 105680189 + processed_transcript retained_intron MGP_129S1SvImJ_T0018699.1 MGP_129S1SvImJ_G0015789.1 mouse_genomes_project X 105675369 105715386 + processed_transcript processed_transcript MGP_129S1SvImJ_T0018700.1 MGP_129S1SvImJ_G0015789.1 mouse_genomes_project X 105675385 105715590 + processed_transcript processed_transcript MGP_129S1SvImJ_T0018701.1 MGP_129S1SvImJ_G0015789.1 mouse_genomes_project X 105749110 105822859 + processed_transcript processed_transcript MGP_129S1SvImJ_T0018647.1 MGP_129S1SvImJ_G0015776.1 mouse_genomes_project X 35075929 35501705 + processed_transcript processed_transcript MGP_129S1SvImJ_T0016468.1 MGP_129S1SvImJ_G0014557.1 mouse_genomes_project X 77743390 77746583 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016250.1 MGP_129S1SvImJ_G0014339.1 mouse_genomes_project X 14763537 14764000 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097144.1 MGP_129S1SvImJ_G0035994.1 mouse_genomes_project X 101834687 101840118 + MGP_129S1SvImJ_P0097144 Pbdc1 protein_coding protein_coding MGP_129S1SvImJ_T0097145.1 MGP_129S1SvImJ_G0035994.1 mouse_genomes_project X 101834692 101872203 + MGP_129S1SvImJ_P0097145 Pbdc1 protein_coding protein_coding MGP_129S1SvImJ_T0097146.1 MGP_129S1SvImJ_G0035994.1 mouse_genomes_project X 101834706 101838092 + Pbdc1 protein_coding retained_intron MGP_129S1SvImJ_T0016871.1 MGP_129S1SvImJ_G0014960.1 mouse_genomes_project X 155503067 155503199 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096895.1 MGP_129S1SvImJ_G0035924.1 mouse_genomes_project X 92629863 92680103 - MGP_129S1SvImJ_P0096895 Vsig4 protein_coding protein_coding MGP_129S1SvImJ_T0096896.1 MGP_129S1SvImJ_G0035924.1 mouse_genomes_project X 92632610 92680077 - Vsig4 protein_coding processed_transcript MGP_129S1SvImJ_T0096155.1 MGP_129S1SvImJ_G0035739.1 mouse_genomes_project X 51905818 51931895 + MGP_129S1SvImJ_P0096155 Slc9a6 protein_coding protein_coding MGP_129S1SvImJ_T0096156.1 MGP_129S1SvImJ_G0035739.1 mouse_genomes_project X 51905836 51962121 + MGP_129S1SvImJ_P0096156 Slc9a6 protein_coding protein_coding MGP_129S1SvImJ_T0096157.1 MGP_129S1SvImJ_G0035739.1 mouse_genomes_project X 51905878 51961732 + MGP_129S1SvImJ_P0096157 Slc9a6 protein_coding protein_coding MGP_129S1SvImJ_T0096158.1 MGP_129S1SvImJ_G0035739.1 mouse_genomes_project X 51956135 51961720 + Slc9a6 protein_coding retained_intron MGP_129S1SvImJ_T0098145.1 MGP_129S1SvImJ_G0036272.1 mouse_genomes_project X 165522418 165561947 - MGP_129S1SvImJ_P0098145 Prps2 protein_coding protein_coding MGP_129S1SvImJ_T0098146.1 MGP_129S1SvImJ_G0036272.1 mouse_genomes_project X 165551625 165561908 - Prps2 protein_coding processed_transcript MGP_129S1SvImJ_T0005605.1 MGP_129S1SvImJ_G0004725.1 mouse_genomes_project X 51655295 51658466 - Gm2155 antisense antisense MGP_129S1SvImJ_T0095764.1 MGP_129S1SvImJ_G0035595.1 mouse_genomes_project X 15575359 15587286 + MGP_129S1SvImJ_P0095764 Cdk16 protein_coding protein_coding MGP_129S1SvImJ_T0095765.1 MGP_129S1SvImJ_G0035595.1 mouse_genomes_project X 15575404 15581768 + Cdk16 protein_coding processed_transcript MGP_129S1SvImJ_T0095766.1 MGP_129S1SvImJ_G0035595.1 mouse_genomes_project X 15575823 15587286 + MGP_129S1SvImJ_P0095766 Cdk16 protein_coding protein_coding MGP_129S1SvImJ_T0095767.1 MGP_129S1SvImJ_G0035595.1 mouse_genomes_project X 15581688 15583691 + Cdk16 protein_coding retained_intron MGP_129S1SvImJ_T0095768.1 MGP_129S1SvImJ_G0035595.1 mouse_genomes_project X 15583266 15583891 + Cdk16 protein_coding retained_intron MGP_129S1SvImJ_T0095769.1 MGP_129S1SvImJ_G0035595.1 mouse_genomes_project X 15583423 15584614 + Cdk16 protein_coding retained_intron MGP_129S1SvImJ_T0095770.1 MGP_129S1SvImJ_G0035595.1 mouse_genomes_project X 15583810 15584573 + Cdk16 protein_coding retained_intron MGP_129S1SvImJ_T0095771.1 MGP_129S1SvImJ_G0035595.1 mouse_genomes_project X 15583850 15587205 + Cdk16 protein_coding processed_transcript MGP_129S1SvImJ_T0095862.1 MGP_129S1SvImJ_G0035626.1 mouse_genomes_project X 31809806 31810378 + Ube2a protein_coding processed_transcript MGP_129S1SvImJ_T0095863.1 MGP_129S1SvImJ_G0035626.1 mouse_genomes_project X 31810237 31811274 + Ube2a protein_coding retained_intron MGP_129S1SvImJ_T0095864.1 MGP_129S1SvImJ_G0035626.1 mouse_genomes_project X 31810237 31819022 + MGP_129S1SvImJ_P0095864 Ube2a protein_coding protein_coding MGP_129S1SvImJ_T0095865.1 MGP_129S1SvImJ_G0035626.1 mouse_genomes_project X 31810247 31819696 + MGP_129S1SvImJ_P0095865 Ube2a protein_coding protein_coding MGP_129S1SvImJ_T0095866.1 MGP_129S1SvImJ_G0035626.1 mouse_genomes_project X 31810392 31818912 + MGP_129S1SvImJ_P0095866 Ube2a protein_coding protein_coding MGP_129S1SvImJ_T0095867.1 MGP_129S1SvImJ_G0035626.1 mouse_genomes_project X 31817248 31819027 + Ube2a protein_coding retained_intron MGP_129S1SvImJ_T0016801.1 MGP_129S1SvImJ_G0014890.1 mouse_genomes_project X 140714850 140715880 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096511.1 MGP_129S1SvImJ_G0035831.1 mouse_genomes_project X 69913687 69938427 + MGP_129S1SvImJ_P0096511 Opn1mw protein_coding protein_coding MGP_129S1SvImJ_T0096512.1 MGP_129S1SvImJ_G0035831.1 mouse_genomes_project X 69913689 69938418 + MGP_129S1SvImJ_P0096512 Opn1mw protein_coding protein_coding MGP_129S1SvImJ_T0096513.1 MGP_129S1SvImJ_G0035831.1 mouse_genomes_project X 69913704 69931222 + Opn1mw protein_coding processed_transcript MGP_129S1SvImJ_T0096514.1 MGP_129S1SvImJ_G0035831.1 mouse_genomes_project X 69925333 69938423 + Opn1mw protein_coding processed_transcript MGP_129S1SvImJ_T0096515.1 MGP_129S1SvImJ_G0035831.1 mouse_genomes_project X 69925354 69927297 + Opn1mw protein_coding processed_transcript MGP_129S1SvImJ_T0096516.1 MGP_129S1SvImJ_G0035831.1 mouse_genomes_project X 69925851 69938423 + MGP_129S1SvImJ_P0096516 Opn1mw protein_coding protein_coding MGP_129S1SvImJ_T0095469.1 MGP_129S1SvImJ_G0035516.1 mouse_genomes_project X 2268897 2279505 + MGP_129S1SvImJ_P0095469 Prickle3 protein_coding protein_coding MGP_129S1SvImJ_T0095470.1 MGP_129S1SvImJ_G0035516.1 mouse_genomes_project X 2269109 2272766 + Prickle3 protein_coding retained_intron MGP_129S1SvImJ_T0095471.1 MGP_129S1SvImJ_G0035516.1 mouse_genomes_project X 2270170 2279505 + MGP_129S1SvImJ_P0095471 Prickle3 protein_coding protein_coding MGP_129S1SvImJ_T0095472.1 MGP_129S1SvImJ_G0035516.1 mouse_genomes_project X 2274382 2279505 + Prickle3 protein_coding retained_intron MGP_129S1SvImJ_T0095473.1 MGP_129S1SvImJ_G0035516.1 mouse_genomes_project X 2277669 2278709 + Prickle3 protein_coding retained_intron MGP_129S1SvImJ_T0016352.1 MGP_129S1SvImJ_G0014441.1 mouse_genomes_project X 53961197 53962086 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016754.1 MGP_129S1SvImJ_G0014843.1 mouse_genomes_project X 134324377 134324795 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097586.1 MGP_129S1SvImJ_G0036132.1 mouse_genomes_project X 137588482 137633207 + MGP_129S1SvImJ_P0097586 Pih1h3b protein_coding protein_coding MGP_129S1SvImJ_T0011795.1 MGP_129S1SvImJ_G0009911.1 mouse_genomes_project X 134114531 134114824 + Gm23068 misc_RNA misc_RNA MGP_129S1SvImJ_T0005638.1 MGP_129S1SvImJ_G0004751.1 mouse_genomes_project X 159881960 159882515 + Gm15202 antisense antisense MGP_129S1SvImJ_T0095650.1 MGP_129S1SvImJ_G0035562.1 mouse_genomes_project X 4813601 4964320 - MGP_129S1SvImJ_P0095650 Rpgr protein_coding protein_coding MGP_129S1SvImJ_T0095651.1 MGP_129S1SvImJ_G0035562.1 mouse_genomes_project X 4898670 4964320 - MGP_129S1SvImJ_P0095651 Rpgr protein_coding protein_coding MGP_129S1SvImJ_T0095652.1 MGP_129S1SvImJ_G0035562.1 mouse_genomes_project X 4899128 4964093 - MGP_129S1SvImJ_P0095652 Rpgr protein_coding protein_coding MGP_129S1SvImJ_T0095653.1 MGP_129S1SvImJ_G0035562.1 mouse_genomes_project X 4902628 4964320 - MGP_129S1SvImJ_P0095653 Rpgr protein_coding protein_coding MGP_129S1SvImJ_T0095654.1 MGP_129S1SvImJ_G0035562.1 mouse_genomes_project X 4921925 4964158 - Rpgr protein_coding retained_intron MGP_129S1SvImJ_T0095655.1 MGP_129S1SvImJ_G0035562.1 mouse_genomes_project X 4954464 4964133 - Rpgr protein_coding retained_intron MGP_129S1SvImJ_T0095656.1 MGP_129S1SvImJ_G0035562.1 mouse_genomes_project X 4960962 4963882 - Rpgr protein_coding processed_transcript MGP_129S1SvImJ_T0011244.1 MGP_129S1SvImJ_G0009360.1 mouse_genomes_project X 148275577 148275638 - Mir3620 miRNA miRNA MGP_129S1SvImJ_T0097967.1 MGP_129S1SvImJ_G0036229.1 mouse_genomes_project X 158038072 158054177 - MGP_129S1SvImJ_P0097967 Pdha1 protein_coding protein_coding MGP_129S1SvImJ_T0097968.1 MGP_129S1SvImJ_G0036229.1 mouse_genomes_project X 158043154 158044829 - Pdha1 protein_coding retained_intron MGP_129S1SvImJ_T0097969.1 MGP_129S1SvImJ_G0036229.1 mouse_genomes_project X 158045151 158054073 - Pdha1 protein_coding retained_intron MGP_129S1SvImJ_T0097970.1 MGP_129S1SvImJ_G0036229.1 mouse_genomes_project X 158052660 158054120 - Pdha1 protein_coding processed_transcript MGP_129S1SvImJ_T0016668.1 MGP_129S1SvImJ_G0014757.1 mouse_genomes_project X 112087536 112090404 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096432.1 MGP_129S1SvImJ_G0035824.1 mouse_genomes_project X 69669212 69692909 - MGP_129S1SvImJ_P0096432 Arhgap4 protein_coding protein_coding MGP_129S1SvImJ_T0096437.1 MGP_129S1SvImJ_G0035824.1 mouse_genomes_project X 69672122 69692903 - MGP_129S1SvImJ_P0096437 Arhgap4 protein_coding protein_coding MGP_129S1SvImJ_T0096438.1 MGP_129S1SvImJ_G0035824.1 mouse_genomes_project X 69672128 69692869 - MGP_129S1SvImJ_P0096438 Arhgap4 protein_coding protein_coding MGP_129S1SvImJ_T0096439.1 MGP_129S1SvImJ_G0035824.1 mouse_genomes_project X 69672302 69692844 - Arhgap4 protein_coding retained_intron MGP_129S1SvImJ_T0096440.1 MGP_129S1SvImJ_G0035824.1 mouse_genomes_project X 69672302 69692844 - Arhgap4 protein_coding retained_intron MGP_129S1SvImJ_T0096441.1 MGP_129S1SvImJ_G0035824.1 mouse_genomes_project X 69672302 69692844 - Arhgap4 protein_coding retained_intron MGP_129S1SvImJ_T0096442.1 MGP_129S1SvImJ_G0035824.1 mouse_genomes_project X 69672302 69692844 - Arhgap4 protein_coding retained_intron MGP_129S1SvImJ_T0096443.1 MGP_129S1SvImJ_G0035824.1 mouse_genomes_project X 69672302 69692844 - Arhgap4 protein_coding retained_intron MGP_129S1SvImJ_T0096444.1 MGP_129S1SvImJ_G0035824.1 mouse_genomes_project X 69672302 69692844 - MGP_129S1SvImJ_P0096444 Arhgap4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096445.1 MGP_129S1SvImJ_G0035824.1 mouse_genomes_project X 69672302 69692844 - MGP_129S1SvImJ_P0096445 Arhgap4 protein_coding protein_coding MGP_129S1SvImJ_T0096446.1 MGP_129S1SvImJ_G0035824.1 mouse_genomes_project X 69672308 69692844 - MGP_129S1SvImJ_P0096446 Arhgap4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096447.1 MGP_129S1SvImJ_G0035824.1 mouse_genomes_project X 69672446 69692802 - MGP_129S1SvImJ_P0096447 Arhgap4 protein_coding protein_coding MGP_129S1SvImJ_T0096448.1 MGP_129S1SvImJ_G0035824.1 mouse_genomes_project X 69674181 69675197 - Arhgap4 protein_coding processed_transcript MGP_129S1SvImJ_T0096449.1 MGP_129S1SvImJ_G0035824.1 mouse_genomes_project X 69674584 69675837 - MGP_129S1SvImJ_P0096449 Arhgap4 protein_coding protein_coding MGP_129S1SvImJ_T0096450.1 MGP_129S1SvImJ_G0035824.1 mouse_genomes_project X 69674641 69677397 - MGP_129S1SvImJ_P0096450 Arhgap4 protein_coding protein_coding MGP_129S1SvImJ_T0096451.1 MGP_129S1SvImJ_G0035824.1 mouse_genomes_project X 69677083 69704039 - Arhgap4 protein_coding retained_intron MGP_129S1SvImJ_T0096452.1 MGP_129S1SvImJ_G0035824.1 mouse_genomes_project X 69677087 69678509 - Arhgap4 protein_coding processed_transcript MGP_129S1SvImJ_T0096453.1 MGP_129S1SvImJ_G0035824.1 mouse_genomes_project X 69677879 69687231 - MGP_129S1SvImJ_P0096453 Arhgap4 protein_coding protein_coding MGP_129S1SvImJ_T0096454.1 MGP_129S1SvImJ_G0035824.1 mouse_genomes_project X 69687959 69692871 - Arhgap4 protein_coding processed_transcript MGP_129S1SvImJ_T0096455.1 MGP_129S1SvImJ_G0035824.1 mouse_genomes_project X 69688352 69692866 - MGP_129S1SvImJ_P0096455 Arhgap4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0098690.1 MGP_129S1SvImJ_G0036775.1 mouse_genomes_project X 149736901 149737008 + n-R5s14 rRNA rRNA MGP_129S1SvImJ_T0097853.1 MGP_129S1SvImJ_G0036191.1 mouse_genomes_project X 150834546 150835956 - MGP_129S1SvImJ_P0097853 Mageh1 protein_coding protein_coding MGP_129S1SvImJ_T0011159.1 MGP_129S1SvImJ_G0009275.1 mouse_genomes_project X 47630596 47630705 - Mir717 miRNA miRNA MGP_129S1SvImJ_T0011233.1 MGP_129S1SvImJ_G0009349.1 mouse_genomes_project X 137848184 137848249 + Mir3475 miRNA miRNA MGP_129S1SvImJ_T0097206.1 MGP_129S1SvImJ_G0036009.1 mouse_genomes_project X 103644744 103648311 - MGP_129S1SvImJ_P0097206 Zcchc5 protein_coding protein_coding MGP_129S1SvImJ_T0005607.1 MGP_129S1SvImJ_G0004727.1 mouse_genomes_project X 55927959 56192169 + antisense antisense MGP_129S1SvImJ_T0005606.1 MGP_129S1SvImJ_G0004726.1 mouse_genomes_project X 52526799 52530559 + Gm14718 antisense antisense MGP_129S1SvImJ_T0011179.1 MGP_129S1SvImJ_G0009295.1 mouse_genomes_project X 62351537 62351614 - Mir743b miRNA miRNA MGP_129S1SvImJ_T0096143.1 MGP_129S1SvImJ_G0035733.1 mouse_genomes_project X 51658261 51661919 + MGP_129S1SvImJ_P0096143 Smim10l2a protein_coding protein_coding MGP_129S1SvImJ_T0016390.1 MGP_129S1SvImJ_G0014479.1 mouse_genomes_project X 61513763 61515891 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016255.1 MGP_129S1SvImJ_G0014344.1 mouse_genomes_project X 15418747 15420074 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011783.1 MGP_129S1SvImJ_G0009899.1 mouse_genomes_project X 100114495 100114621 - Gm27927 misc_RNA misc_RNA MGP_129S1SvImJ_T0016282.1 MGP_129S1SvImJ_G0014371.1 mouse_genomes_project X 34107946 34108202 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102873.1 MGP_129S1SvImJ_G0040705.1 mouse_genomes_project X 103144248 103249110 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0098717.1 MGP_129S1SvImJ_G0036802.1 mouse_genomes_project X 78097709 78097928 + Gm26174 ribozyme ribozyme MGP_129S1SvImJ_T0016913.1 MGP_129S1SvImJ_G0015002.1 mouse_genomes_project X 164152363 164152751 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011192.1 MGP_129S1SvImJ_G0009308.1 mouse_genomes_project X 62422996 62423077 - Mir465c-1 miRNA miRNA MGP_129S1SvImJ_T0016212.1 MGP_129S1SvImJ_G0014301.1 mouse_genomes_project X 5772654 5773147 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016714.1 MGP_129S1SvImJ_G0014803.1 mouse_genomes_project X 123960946 123961310 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016300.1 MGP_129S1SvImJ_G0014389.1 mouse_genomes_project X 37194389 37198004 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016196.1 MGP_129S1SvImJ_G0014285.1 mouse_genomes_project X 2686202 2686373 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016280.1 MGP_129S1SvImJ_G0014369.1 mouse_genomes_project X 33905673 33907231 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016446.1 MGP_129S1SvImJ_G0014535.1 mouse_genomes_project X 73111483 73112011 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011175.1 MGP_129S1SvImJ_G0009291.1 mouse_genomes_project X 55058452 55058552 - Gm44500 miRNA miRNA MGP_129S1SvImJ_T0016683.1 MGP_129S1SvImJ_G0014772.1 mouse_genomes_project X 114720541 114720745 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097472.1 MGP_129S1SvImJ_G0036099.1 mouse_genomes_project X 133817602 133924794 + MGP_129S1SvImJ_P0097472 protein_coding protein_coding MGP_129S1SvImJ_T0097475.1 MGP_129S1SvImJ_G0036099.1 mouse_genomes_project X 133903348 133924794 + MGP_129S1SvImJ_P0097475 protein_coding protein_coding MGP_129S1SvImJ_T0016735.1 MGP_129S1SvImJ_G0014824.1 mouse_genomes_project X 131197399 131199028 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009389.1 MGP_129S1SvImJ_G0007539.1 mouse_genomes_project X 56433622 56477022 + Gm14664 lincRNA lincRNA MGP_129S1SvImJ_T0016199.1 MGP_129S1SvImJ_G0014288.1 mouse_genomes_project X 3559646 3561143 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016624.1 MGP_129S1SvImJ_G0014713.1 mouse_genomes_project X 103475695 103477049 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096140.1 MGP_129S1SvImJ_G0035730.1 mouse_genomes_project X 49016124 49032885 - MGP_129S1SvImJ_P0096140 1700013H16Rik protein_coding protein_coding MGP_129S1SvImJ_T0011799.1 MGP_129S1SvImJ_G0009915.1 mouse_genomes_project X 138201950 138202252 - Gm22025 misc_RNA misc_RNA MGP_129S1SvImJ_T0096702.1 MGP_129S1SvImJ_G0035859.1 mouse_genomes_project X 71254549 71260659 - MGP_129S1SvImJ_P0096702 Mtcp1 protein_coding protein_coding MGP_129S1SvImJ_T0096703.1 MGP_129S1SvImJ_G0035859.1 mouse_genomes_project X 71254755 71260534 - Mtcp1 protein_coding processed_transcript MGP_129S1SvImJ_T0096704.1 MGP_129S1SvImJ_G0035859.1 mouse_genomes_project X 71254882 71260704 - MGP_129S1SvImJ_P0096704 Mtcp1 protein_coding protein_coding MGP_129S1SvImJ_T0096705.1 MGP_129S1SvImJ_G0035859.1 mouse_genomes_project X 71257284 71260684 - Mtcp1 protein_coding retained_intron MGP_129S1SvImJ_T0011161.1 MGP_129S1SvImJ_G0009277.1 mouse_genomes_project X 47958027 47958118 - Mir92-2 miRNA miRNA MGP_129S1SvImJ_T0096242.1 MGP_129S1SvImJ_G0035769.1 mouse_genomes_project X 62220428 62232508 + MGP_129S1SvImJ_P0096242 Slitrk2 protein_coding protein_coding MGP_129S1SvImJ_T0096243.1 MGP_129S1SvImJ_G0035769.1 mouse_genomes_project X 62224119 62227601 + MGP_129S1SvImJ_P0096243 Slitrk2 protein_coding protein_coding MGP_129S1SvImJ_T0016859.1 MGP_129S1SvImJ_G0014948.1 mouse_genomes_project X 153370901 153371471 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016243.1 MGP_129S1SvImJ_G0014332.1 mouse_genomes_project X 13231775 13231932 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016289.1 MGP_129S1SvImJ_G0014378.1 mouse_genomes_project X 35012675 35014127 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097603.1 MGP_129S1SvImJ_G0036137.1 mouse_genomes_project X 138378834 138383961 - MGP_129S1SvImJ_P0097603 Tex13 protein_coding protein_coding MGP_129S1SvImJ_T0097604.1 MGP_129S1SvImJ_G0036137.1 mouse_genomes_project X 138379795 138381380 - Tex13 protein_coding retained_intron MGP_129S1SvImJ_T0011227.1 MGP_129S1SvImJ_G0009343.1 mouse_genomes_project X 127990085 127990195 - Gm26209 miRNA miRNA MGP_129S1SvImJ_T0096094.1 MGP_129S1SvImJ_G0035709.1 mouse_genomes_project X 46040566 46090514 - MGP_129S1SvImJ_P0096094 Frmd7 protein_coding protein_coding MGP_129S1SvImJ_T0096095.1 MGP_129S1SvImJ_G0035709.1 mouse_genomes_project X 46040566 46090514 - MGP_129S1SvImJ_P0096095 Frmd7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096096.1 MGP_129S1SvImJ_G0035709.1 mouse_genomes_project X 46040566 46090514 - MGP_129S1SvImJ_P0096096 Frmd7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0096978.1 MGP_129S1SvImJ_G0035947.1 mouse_genomes_project X 97085235 97189558 + MGP_129S1SvImJ_P0096978 Kif4 protein_coding protein_coding MGP_129S1SvImJ_T0096979.1 MGP_129S1SvImJ_G0035947.1 mouse_genomes_project X 97094396 97096744 + Kif4 protein_coding retained_intron MGP_129S1SvImJ_T0096980.1 MGP_129S1SvImJ_G0035947.1 mouse_genomes_project X 97174682 97186994 + Kif4 protein_coding processed_transcript MGP_129S1SvImJ_T0097503.1 MGP_129S1SvImJ_G0036108.1 mouse_genomes_project X 134362856 134385472 - MGP_129S1SvImJ_P0097503 protein_coding protein_coding MGP_129S1SvImJ_T0097505.1 MGP_129S1SvImJ_G0036108.1 mouse_genomes_project X 134363533 134384074 - MGP_129S1SvImJ_P0097505 protein_coding protein_coding MGP_129S1SvImJ_T0011198.1 MGP_129S1SvImJ_G0009314.1 mouse_genomes_project X 67188873 67188965 - Gm23945 miRNA miRNA MGP_129S1SvImJ_T0098692.1 MGP_129S1SvImJ_G0036777.1 mouse_genomes_project X 153448619 153448738 + n-R5s16 rRNA rRNA MGP_129S1SvImJ_T0097561.1 MGP_129S1SvImJ_G0036128.1 mouse_genomes_project X 137314148 137324784 + MGP_129S1SvImJ_P0097561 Cldn2 protein_coding protein_coding MGP_129S1SvImJ_T0097562.1 MGP_129S1SvImJ_G0036128.1 mouse_genomes_project X 137316104 137322111 + MGP_129S1SvImJ_P0097562 Cldn2 protein_coding protein_coding MGP_129S1SvImJ_T0097563.1 MGP_129S1SvImJ_G0036128.1 mouse_genomes_project X 137319398 137322499 + MGP_129S1SvImJ_P0097563 Cldn2 protein_coding protein_coding MGP_129S1SvImJ_T0018637.1 MGP_129S1SvImJ_G0015770.1 mouse_genomes_project X 2168719 2216634 - Gm36995 processed_transcript retained_intron MGP_129S1SvImJ_T0098167.1 MGP_129S1SvImJ_G0036277.1 mouse_genomes_project X 167475518 167537540 - MGP_129S1SvImJ_P0098167 Hccs protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0098168.1 MGP_129S1SvImJ_G0036277.1 mouse_genomes_project X 167528697 167537448 - MGP_129S1SvImJ_P0098168 Hccs protein_coding protein_coding MGP_129S1SvImJ_T0098169.1 MGP_129S1SvImJ_G0036277.1 mouse_genomes_project X 167528697 167537462 - MGP_129S1SvImJ_P0098169 Hccs protein_coding protein_coding MGP_129S1SvImJ_T0011173.1 MGP_129S1SvImJ_G0009289.1 mouse_genomes_project X 51883929 51883992 - Mir5116 miRNA miRNA MGP_129S1SvImJ_T0011138.1 MGP_129S1SvImJ_G0009254.1 mouse_genomes_project X 1830779 1830888 - Mir501 miRNA miRNA MGP_129S1SvImJ_T0097316.1 MGP_129S1SvImJ_G0036048.1 mouse_genomes_project X 123803025 123806402 - MGP_129S1SvImJ_P0097316 4932411N23Rik protein_coding protein_coding MGP_129S1SvImJ_T0095910.1 MGP_129S1SvImJ_G0035656.1 mouse_genomes_project X 32947065 32954579 - Btg1-ps1 protein_coding unprocessed_pseudogene MGP_129S1SvImJ_T0095912.1 MGP_129S1SvImJ_G0035656.1 mouse_genomes_project X 32947800 32954579 - MGP_129S1SvImJ_P0095912 Btg1-ps1 protein_coding protein_coding MGP_129S1SvImJ_T0101562.1 MGP_129S1SvImJ_G0039629.1 mouse_genomes_project X 167907793 167907912 - Gm25651 snoRNA snoRNA MGP_129S1SvImJ_T0016473.1 MGP_129S1SvImJ_G0014562.1 mouse_genomes_project X 80099537 80099969 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016661.1 MGP_129S1SvImJ_G0014750.1 mouse_genomes_project X 110819719 110822141 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102861.1 MGP_129S1SvImJ_G0040693.1 mouse_genomes_project X 82448866 82449899 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0096917.1 MGP_129S1SvImJ_G0035931.1 mouse_genomes_project X 94519450 94700407 + MGP_129S1SvImJ_P0096917 Ar protein_coding protein_coding MGP_129S1SvImJ_T0011193.1 MGP_129S1SvImJ_G0009309.1 mouse_genomes_project X 62431718 62431797 - Mir465b-2 miRNA miRNA MGP_129S1SvImJ_T0097321.1 MGP_129S1SvImJ_G0036053.1 mouse_genomes_project X 126795948 127249793 + Diaph2 protein_coding retained_intron MGP_129S1SvImJ_T0097322.1 MGP_129S1SvImJ_G0036053.1 mouse_genomes_project X 126795948 127562639 + MGP_129S1SvImJ_P0097322 Diaph2 protein_coding protein_coding MGP_129S1SvImJ_T0097323.1 MGP_129S1SvImJ_G0036053.1 mouse_genomes_project X 126796002 127418178 + Diaph2 protein_coding retained_intron MGP_129S1SvImJ_T0097324.1 MGP_129S1SvImJ_G0036053.1 mouse_genomes_project X 126796011 127558031 + MGP_129S1SvImJ_P0097324 Diaph2 protein_coding protein_coding MGP_129S1SvImJ_T0097325.1 MGP_129S1SvImJ_G0036053.1 mouse_genomes_project X 126796030 127417851 + Diaph2 protein_coding retained_intron MGP_129S1SvImJ_T0097326.1 MGP_129S1SvImJ_G0036053.1 mouse_genomes_project X 126796182 127562642 + MGP_129S1SvImJ_P0097326 Diaph2 protein_coding protein_coding MGP_129S1SvImJ_T0097327.1 MGP_129S1SvImJ_G0036053.1 mouse_genomes_project X 127018043 127095152 + Diaph2 protein_coding processed_transcript MGP_129S1SvImJ_T0018719.1 MGP_129S1SvImJ_G0015797.1 mouse_genomes_project X 150836009 150872842 + 9530051G07Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0016718.1 MGP_129S1SvImJ_G0014807.1 mouse_genomes_project X 126571937 126572723 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096139.1 MGP_129S1SvImJ_G0035729.1 mouse_genomes_project X 48998056 49011665 + MGP_129S1SvImJ_P0096139 4930502E18Rik protein_coding protein_coding MGP_129S1SvImJ_T0016520.1 MGP_129S1SvImJ_G0014609.1 mouse_genomes_project X 88965224 88966784 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011788.1 MGP_129S1SvImJ_G0009904.1 mouse_genomes_project X 100272973 100273100 + Gm27285 misc_RNA misc_RNA MGP_129S1SvImJ_T0101553.1 MGP_129S1SvImJ_G0039620.1 mouse_genomes_project X 153021973 153022105 + Gm25429 snoRNA snoRNA MGP_129S1SvImJ_T0011789.1 MGP_129S1SvImJ_G0009905.1 mouse_genomes_project X 100291687 100291892 + Gm27321 misc_RNA misc_RNA MGP_129S1SvImJ_T0016921.1 MGP_129S1SvImJ_G0015010.1 mouse_genomes_project X 165961621 165962917 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100277.1 MGP_129S1SvImJ_G0038344.1 mouse_genomes_project X 118801023 118801131 + Gm24846 snRNA snRNA MGP_129S1SvImJ_T0016623.1 MGP_129S1SvImJ_G0014712.1 mouse_genomes_project X 103467103 103467610 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011782.1 MGP_129S1SvImJ_G0009898.1 mouse_genomes_project X 100106042 100106110 - Gm27733 misc_RNA misc_RNA MGP_129S1SvImJ_T0097495.1 MGP_129S1SvImJ_G0036104.1 mouse_genomes_project X 134168669 134192135 - MGP_129S1SvImJ_P0097495 Glra4 protein_coding protein_coding MGP_129S1SvImJ_T0097496.1 MGP_129S1SvImJ_G0036104.1 mouse_genomes_project X 134178000 134192135 - Glra4 protein_coding retained_intron MGP_129S1SvImJ_T0101545.1 MGP_129S1SvImJ_G0039612.1 mouse_genomes_project X 134513461 134513576 - Gm25770 snoRNA snoRNA MGP_129S1SvImJ_T0016605.1 MGP_129S1SvImJ_G0014694.1 mouse_genomes_project X 100577929 100579451 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100244.1 MGP_129S1SvImJ_G0038311.1 mouse_genomes_project X 52024287 52024452 + Gm26312 snRNA snRNA MGP_129S1SvImJ_T0016677.1 MGP_129S1SvImJ_G0014766.1 mouse_genomes_project X 114238049 114239142 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016507.1 MGP_129S1SvImJ_G0014596.1 mouse_genomes_project X 87004234 87004751 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011798.1 MGP_129S1SvImJ_G0009914.1 mouse_genomes_project X 137156734 137157058 - Gm24380 misc_RNA misc_RNA MGP_129S1SvImJ_T0016331.1 MGP_129S1SvImJ_G0014420.1 mouse_genomes_project X 46410563 46411252 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096559.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70079650 70080654 + Taz protein_coding processed_transcript MGP_129S1SvImJ_T0096560.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70079650 70080604 + Taz protein_coding processed_transcript MGP_129S1SvImJ_T0096561.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70079681 70087890 + MGP_129S1SvImJ_P0096561 Taz protein_coding unknown_likely_coding MGP_129S1SvImJ_T0096562.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70080435 70087890 + MGP_129S1SvImJ_P0096562 Taz protein_coding protein_coding MGP_129S1SvImJ_T0096563.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70080488 70083626 + Taz protein_coding retained_intron MGP_129S1SvImJ_T0096564.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70080488 70085774 + Taz protein_coding retained_intron MGP_129S1SvImJ_T0096565.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70080488 70087887 + Taz protein_coding retained_intron MGP_129S1SvImJ_T0096566.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70080488 70087887 + MGP_129S1SvImJ_P0096566 Taz protein_coding protein_coding MGP_129S1SvImJ_T0096567.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70080498 70086018 + Taz protein_coding retained_intron MGP_129S1SvImJ_T0096568.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70080498 70086443 + Taz protein_coding retained_intron MGP_129S1SvImJ_T0096569.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70080500 70087887 + MGP_129S1SvImJ_P0096569 Taz protein_coding protein_coding MGP_129S1SvImJ_T0096570.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70080504 70081708 + Taz protein_coding retained_intron MGP_129S1SvImJ_T0096571.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70080510 70086897 + MGP_129S1SvImJ_P0096571 Taz protein_coding protein_coding MGP_129S1SvImJ_T0096572.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70080527 70082053 + Taz protein_coding retained_intron MGP_129S1SvImJ_T0096573.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70080659 70086583 + Taz protein_coding retained_intron MGP_129S1SvImJ_T0096574.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70080746 70087139 + MGP_129S1SvImJ_P0096574 Taz protein_coding protein_coding MGP_129S1SvImJ_T0096575.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70080820 70087224 + MGP_129S1SvImJ_P0096575 Taz protein_coding protein_coding MGP_129S1SvImJ_T0096576.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70081675 70087087 + MGP_129S1SvImJ_P0096576 Taz protein_coding protein_coding MGP_129S1SvImJ_T0096577.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70085403 70086348 + Taz protein_coding retained_intron MGP_129S1SvImJ_T0096578.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70085758 70087473 + MGP_129S1SvImJ_P0096578 Taz protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096579.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70085810 70087627 + MGP_129S1SvImJ_P0096579 Taz protein_coding protein_coding MGP_129S1SvImJ_T0096580.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70086400 70087470 + MGP_129S1SvImJ_P0096580 Taz protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096581.1 MGP_129S1SvImJ_G0035838.1 mouse_genomes_project X 70086411 70087420 + Taz protein_coding retained_intron MGP_129S1SvImJ_T0016237.1 MGP_129S1SvImJ_G0014326.1 mouse_genomes_project X 11161056 11161443 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016724.1 MGP_129S1SvImJ_G0014813.1 mouse_genomes_project X 128121774 128123168 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096229.1 MGP_129S1SvImJ_G0035760.1 mouse_genomes_project X 56591785 56594290 - MGP_129S1SvImJ_P0096229 Cdr1 protein_coding protein_coding MGP_129S1SvImJ_T0005640.1 MGP_129S1SvImJ_G0004753.1 mouse_genomes_project X 167253815 167325490 - Gm15261 antisense antisense MGP_129S1SvImJ_T0098045.1 MGP_129S1SvImJ_G0036245.1 mouse_genomes_project X 161562496 161604012 - MGP_129S1SvImJ_P0098045 Grpr protein_coding protein_coding MGP_129S1SvImJ_T0095602.1 MGP_129S1SvImJ_G0035543.1 mouse_genomes_project X 2834406 2842428 - MGP_129S1SvImJ_P0095602 Ebp protein_coding protein_coding MGP_129S1SvImJ_T0095603.1 MGP_129S1SvImJ_G0035543.1 mouse_genomes_project X 2834408 2836250 - Ebp protein_coding retained_intron MGP_129S1SvImJ_T0095604.1 MGP_129S1SvImJ_G0035543.1 mouse_genomes_project X 2835823 2842316 - MGP_129S1SvImJ_P0095604 Ebp protein_coding protein_coding MGP_129S1SvImJ_T0095605.1 MGP_129S1SvImJ_G0035543.1 mouse_genomes_project X 2838860 2841814 - Ebp protein_coding retained_intron MGP_129S1SvImJ_T0016809.1 MGP_129S1SvImJ_G0014898.1 mouse_genomes_project X 142111835 142112966 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101520.1 MGP_129S1SvImJ_G0039587.1 mouse_genomes_project X 70429828 70429963 + Gm26417 snoRNA snoRNA MGP_129S1SvImJ_T0016553.1 MGP_129S1SvImJ_G0014642.1 mouse_genomes_project X 93445280 93446085 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096347.1 MGP_129S1SvImJ_G0035803.1 mouse_genomes_project X 68952078 68954583 + MGP_129S1SvImJ_P0096347 F8a protein_coding protein_coding MGP_129S1SvImJ_T0097253.1 MGP_129S1SvImJ_G0036027.1 mouse_genomes_project X 108101421 108187250 - MGP_129S1SvImJ_P0097253 protein_coding protein_coding MGP_129S1SvImJ_T0097254.1 MGP_129S1SvImJ_G0036027.1 mouse_genomes_project X 108101421 108187098 - MGP_129S1SvImJ_P0097254 protein_coding protein_coding MGP_129S1SvImJ_T0097255.1 MGP_129S1SvImJ_G0036027.1 mouse_genomes_project X 108101422 108187250 - MGP_129S1SvImJ_P0097255 protein_coding protein_coding MGP_129S1SvImJ_T0097256.1 MGP_129S1SvImJ_G0036027.1 mouse_genomes_project X 108101422 108210881 - MGP_129S1SvImJ_P0097256 protein_coding protein_coding MGP_129S1SvImJ_T0097257.1 MGP_129S1SvImJ_G0036027.1 mouse_genomes_project X 108103009 108187160 - MGP_129S1SvImJ_P0097257 protein_coding protein_coding MGP_129S1SvImJ_T0097258.1 MGP_129S1SvImJ_G0036027.1 mouse_genomes_project X 108153772 108210860 - MGP_129S1SvImJ_P0097258 protein_coding protein_coding MGP_129S1SvImJ_T0097259.1 MGP_129S1SvImJ_G0036027.1 mouse_genomes_project X 108154710 108257794 - MGP_129S1SvImJ_P0097259 protein_coding protein_coding MGP_129S1SvImJ_T0097260.1 MGP_129S1SvImJ_G0036027.1 mouse_genomes_project X 108158625 108186694 - MGP_129S1SvImJ_P0097260 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097261.1 MGP_129S1SvImJ_G0036027.1 mouse_genomes_project X 108158702 108264270 - MGP_129S1SvImJ_P0097261 protein_coding protein_coding MGP_129S1SvImJ_T0097262.1 MGP_129S1SvImJ_G0036027.1 mouse_genomes_project X 108166811 108264282 - MGP_129S1SvImJ_P0097262 protein_coding protein_coding MGP_129S1SvImJ_T0097263.1 MGP_129S1SvImJ_G0036027.1 mouse_genomes_project X 108170904 108262665 - MGP_129S1SvImJ_P0097263 protein_coding protein_coding MGP_129S1SvImJ_T0016333.1 MGP_129S1SvImJ_G0014422.1 mouse_genomes_project X 47032970 47033503 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011154.1 MGP_129S1SvImJ_G0009270.1 mouse_genomes_project X 34981552 34981623 - Gm26194 miRNA miRNA MGP_129S1SvImJ_T0095627.1 MGP_129S1SvImJ_G0035550.1 mouse_genomes_project X 3716246 3717078 + MGP_129S1SvImJ_P0095627 protein_coding protein_coding MGP_129S1SvImJ_T0005620.1 MGP_129S1SvImJ_G0004739.1 mouse_genomes_project X 92622877 92626588 + F630028O10Rik antisense antisense MGP_129S1SvImJ_T0005621.1 MGP_129S1SvImJ_G0004739.1 mouse_genomes_project X 92622917 92626588 + F630028O10Rik antisense antisense MGP_129S1SvImJ_T0096517.1 MGP_129S1SvImJ_G0035832.1 mouse_genomes_project X 69938611 69955071 - MGP_129S1SvImJ_P0096517 Tex28 protein_coding protein_coding MGP_129S1SvImJ_T0096518.1 MGP_129S1SvImJ_G0035832.1 mouse_genomes_project X 69938611 69955071 - MGP_129S1SvImJ_P0096518 Tex28 protein_coding protein_coding MGP_129S1SvImJ_T0095903.1 MGP_129S1SvImJ_G0035650.1 mouse_genomes_project X 32731971 32736006 + MGP_129S1SvImJ_P0095903 Rhox5 protein_coding protein_coding MGP_129S1SvImJ_T0095904.1 MGP_129S1SvImJ_G0035650.1 mouse_genomes_project X 32731980 32735894 + MGP_129S1SvImJ_P0095904 Rhox5 protein_coding protein_coding MGP_129S1SvImJ_T0016232.1 MGP_129S1SvImJ_G0014321.1 mouse_genomes_project X 9200278 9201144 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016513.1 MGP_129S1SvImJ_G0014602.1 mouse_genomes_project X 87663924 87664953 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016208.1 MGP_129S1SvImJ_G0014297.1 mouse_genomes_project X 4080256 4080561 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097094.1 MGP_129S1SvImJ_G0035972.1 mouse_genomes_project X 98833065 98837866 - MGP_129S1SvImJ_P0097094 Cited1 protein_coding protein_coding MGP_129S1SvImJ_T0097095.1 MGP_129S1SvImJ_G0035972.1 mouse_genomes_project X 98833088 98837537 - MGP_129S1SvImJ_P0097095 Cited1 protein_coding protein_coding MGP_129S1SvImJ_T0097096.1 MGP_129S1SvImJ_G0035972.1 mouse_genomes_project X 98833398 98836631 - MGP_129S1SvImJ_P0097096 Cited1 protein_coding protein_coding MGP_129S1SvImJ_T0097097.1 MGP_129S1SvImJ_G0035972.1 mouse_genomes_project X 98833505 98836460 - MGP_129S1SvImJ_P0097097 Cited1 protein_coding protein_coding MGP_129S1SvImJ_T0097098.1 MGP_129S1SvImJ_G0035972.1 mouse_genomes_project X 98833570 98837603 - MGP_129S1SvImJ_P0097098 Cited1 protein_coding protein_coding MGP_129S1SvImJ_T0016580.1 MGP_129S1SvImJ_G0014669.1 mouse_genomes_project X 98793494 98793851 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097629.1 MGP_129S1SvImJ_G0036150.1 mouse_genomes_project X 139812686 139895514 - MGP_129S1SvImJ_P0097629 Acsl4 protein_coding protein_coding MGP_129S1SvImJ_T0097630.1 MGP_129S1SvImJ_G0036150.1 mouse_genomes_project X 139815361 139826744 - Acsl4 protein_coding processed_transcript MGP_129S1SvImJ_T0097631.1 MGP_129S1SvImJ_G0036150.1 mouse_genomes_project X 139815367 139895526 - MGP_129S1SvImJ_P0097631 Acsl4 protein_coding protein_coding MGP_129S1SvImJ_T0098767.1 MGP_129S1SvImJ_G0036852.1 mouse_genomes_project X 89936063 89936201 - Gm23557 scaRNA scaRNA MGP_129S1SvImJ_T0016888.1 MGP_129S1SvImJ_G0014977.1 mouse_genomes_project X 157935286 157935720 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096079.1 MGP_129S1SvImJ_G0035702.1 mouse_genomes_project X 44833897 44834857 + MGP_129S1SvImJ_P0096079 Olfr1320 protein_coding protein_coding MGP_129S1SvImJ_T0005601.1 MGP_129S1SvImJ_G0004722.1 mouse_genomes_project X 44509264 44619683 - Gm14697 antisense antisense MGP_129S1SvImJ_T0096377.1 MGP_129S1SvImJ_G0035815.1 mouse_genomes_project X 69443120 69452445 + MGP_129S1SvImJ_P0096377 Slc6a8 protein_coding protein_coding MGP_129S1SvImJ_T0096378.1 MGP_129S1SvImJ_G0035815.1 mouse_genomes_project X 69443663 69451240 + MGP_129S1SvImJ_P0096378 Slc6a8 protein_coding protein_coding MGP_129S1SvImJ_T0096379.1 MGP_129S1SvImJ_G0035815.1 mouse_genomes_project X 69443745 69452450 + MGP_129S1SvImJ_P0096379 Slc6a8 protein_coding protein_coding MGP_129S1SvImJ_T0096380.1 MGP_129S1SvImJ_G0035815.1 mouse_genomes_project X 69443875 69447281 + Slc6a8 protein_coding retained_intron MGP_129S1SvImJ_T0096381.1 MGP_129S1SvImJ_G0035815.1 mouse_genomes_project X 69445463 69447300 + MGP_129S1SvImJ_P0096381 Slc6a8 protein_coding protein_coding MGP_129S1SvImJ_T0096382.1 MGP_129S1SvImJ_G0035815.1 mouse_genomes_project X 69446801 69452445 + MGP_129S1SvImJ_P0096382 Slc6a8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096383.1 MGP_129S1SvImJ_G0035815.1 mouse_genomes_project X 69447014 69449717 + Slc6a8 protein_coding retained_intron MGP_129S1SvImJ_T0096384.1 MGP_129S1SvImJ_G0035815.1 mouse_genomes_project X 69448109 69451049 + Slc6a8 protein_coding retained_intron MGP_129S1SvImJ_T0096385.1 MGP_129S1SvImJ_G0035815.1 mouse_genomes_project X 69448833 69449948 + Slc6a8 protein_coding processed_transcript MGP_129S1SvImJ_T0096386.1 MGP_129S1SvImJ_G0035815.1 mouse_genomes_project X 69448848 69449864 + Slc6a8 protein_coding retained_intron MGP_129S1SvImJ_T0096387.1 MGP_129S1SvImJ_G0035815.1 mouse_genomes_project X 69448848 69449951 + Slc6a8 protein_coding retained_intron MGP_129S1SvImJ_T0096800.1 MGP_129S1SvImJ_G0035894.1 mouse_genomes_project X 85653753 85659021 - MGP_129S1SvImJ_P0096800 Pet2 protein_coding protein_coding MGP_129S1SvImJ_T0096801.1 MGP_129S1SvImJ_G0035894.1 mouse_genomes_project X 85653753 85659021 - MGP_129S1SvImJ_P0096801 Pet2 protein_coding protein_coding MGP_129S1SvImJ_T0097501.1 MGP_129S1SvImJ_G0036106.1 mouse_genomes_project X 134269863 134280472 - MGP_129S1SvImJ_P0097501 Rab9b protein_coding protein_coding MGP_129S1SvImJ_T0095914.1 MGP_129S1SvImJ_G0035659.1 mouse_genomes_project X 33015675 33025197 - MGP_129S1SvImJ_P0095914 Rhox11 protein_coding protein_coding MGP_129S1SvImJ_T0016740.1 MGP_129S1SvImJ_G0014829.1 mouse_genomes_project X 132026448 132027354 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096034.1 MGP_129S1SvImJ_G0035690.1 mouse_genomes_project X 43395958 43423767 + MGP_129S1SvImJ_P0096034 Utp14a protein_coding protein_coding MGP_129S1SvImJ_T0096035.1 MGP_129S1SvImJ_G0035690.1 mouse_genomes_project X 43395993 43408226 + Utp14a protein_coding processed_transcript MGP_129S1SvImJ_T0096036.1 MGP_129S1SvImJ_G0035690.1 mouse_genomes_project X 43396014 43413306 + Utp14a protein_coding processed_transcript MGP_129S1SvImJ_T0096037.1 MGP_129S1SvImJ_G0035690.1 mouse_genomes_project X 43396039 43423766 + MGP_129S1SvImJ_P0096037 Utp14a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0016327.1 MGP_129S1SvImJ_G0014416.1 mouse_genomes_project X 45518322 45519202 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097861.1 MGP_129S1SvImJ_G0036196.1 mouse_genomes_project X 151383906 151384737 + MGP_129S1SvImJ_P0097861 Cypt3 protein_coding protein_coding MGP_129S1SvImJ_T0097862.1 MGP_129S1SvImJ_G0036196.1 mouse_genomes_project X 151383906 151384743 + MGP_129S1SvImJ_P0097862 Cypt3 protein_coding protein_coding MGP_129S1SvImJ_T0016412.1 MGP_129S1SvImJ_G0014501.1 mouse_genomes_project X 66197747 66198240 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016480.1 MGP_129S1SvImJ_G0014569.1 mouse_genomes_project X 81883869 81884276 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096225.1 MGP_129S1SvImJ_G0035758.1 mouse_genomes_project X 55804060 55908686 - MGP_129S1SvImJ_P0096225 Gm7073 protein_coding protein_coding MGP_129S1SvImJ_T0096226.1 MGP_129S1SvImJ_G0035758.1 mouse_genomes_project X 55804060 55825848 - MGP_129S1SvImJ_P0096226 Gm7073 protein_coding protein_coding MGP_129S1SvImJ_T0096227.1 MGP_129S1SvImJ_G0035758.1 mouse_genomes_project X 55804060 55822134 - MGP_129S1SvImJ_P0096227 Gm7073 protein_coding protein_coding MGP_129S1SvImJ_T0096542.1 MGP_129S1SvImJ_G0035836.1 mouse_genomes_project X 70065629 70067953 + MGP_129S1SvImJ_P0096542 Rpl10 protein_coding protein_coding MGP_129S1SvImJ_T0096543.1 MGP_129S1SvImJ_G0035836.1 mouse_genomes_project X 70065674 70067954 + MGP_129S1SvImJ_P0096543 Rpl10 protein_coding protein_coding MGP_129S1SvImJ_T0096544.1 MGP_129S1SvImJ_G0035836.1 mouse_genomes_project X 70065675 70067581 + Rpl10 protein_coding processed_transcript MGP_129S1SvImJ_T0096545.1 MGP_129S1SvImJ_G0035836.1 mouse_genomes_project X 70065677 70067953 + MGP_129S1SvImJ_P0096545 Rpl10 protein_coding protein_coding MGP_129S1SvImJ_T0096546.1 MGP_129S1SvImJ_G0035836.1 mouse_genomes_project X 70065773 70067041 + Rpl10 protein_coding retained_intron MGP_129S1SvImJ_T0096547.1 MGP_129S1SvImJ_G0035836.1 mouse_genomes_project X 70065796 70067903 + MGP_129S1SvImJ_P0096547 Rpl10 protein_coding protein_coding MGP_129S1SvImJ_T0096548.1 MGP_129S1SvImJ_G0035836.1 mouse_genomes_project X 70065803 70067743 + Rpl10 protein_coding retained_intron MGP_129S1SvImJ_T0096549.1 MGP_129S1SvImJ_G0035836.1 mouse_genomes_project X 70066226 70067862 + Rpl10 protein_coding retained_intron MGP_129S1SvImJ_T0096550.1 MGP_129S1SvImJ_G0035836.1 mouse_genomes_project X 70066259 70067061 + Rpl10 protein_coding retained_intron MGP_129S1SvImJ_T0096551.1 MGP_129S1SvImJ_G0035836.1 mouse_genomes_project X 70066560 70067231 + Rpl10 protein_coding retained_intron MGP_129S1SvImJ_T0096552.1 MGP_129S1SvImJ_G0035836.1 mouse_genomes_project X 70066654 70067624 + Rpl10 protein_coding retained_intron MGP_129S1SvImJ_T0011209.1 MGP_129S1SvImJ_G0009325.1 mouse_genomes_project X 81662134 81662217 + Gm44378 miRNA miRNA MGP_129S1SvImJ_T0016822.1 MGP_129S1SvImJ_G0014911.1 mouse_genomes_project X 143836604 143837650 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016841.1 MGP_129S1SvImJ_G0014930.1 mouse_genomes_project X 149513827 149514543 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016357.1 MGP_129S1SvImJ_G0014446.1 mouse_genomes_project X 55397051 55398170 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097141.1 MGP_129S1SvImJ_G0035991.1 mouse_genomes_project X 101202524 101231596 + MGP_129S1SvImJ_P0097141 Uprt protein_coding protein_coding MGP_129S1SvImJ_T0098031.1 MGP_129S1SvImJ_G0036243.1 mouse_genomes_project X 160929356 161014574 + MGP_129S1SvImJ_P0098031 Ctps2 protein_coding protein_coding MGP_129S1SvImJ_T0098032.1 MGP_129S1SvImJ_G0036243.1 mouse_genomes_project X 160929363 160952455 + Ctps2 protein_coding processed_transcript MGP_129S1SvImJ_T0098033.1 MGP_129S1SvImJ_G0036243.1 mouse_genomes_project X 160929363 160952130 + Ctps2 protein_coding processed_transcript MGP_129S1SvImJ_T0098034.1 MGP_129S1SvImJ_G0036243.1 mouse_genomes_project X 160929729 161063413 + MGP_129S1SvImJ_P0098034 Ctps2 protein_coding protein_coding MGP_129S1SvImJ_T0098035.1 MGP_129S1SvImJ_G0036243.1 mouse_genomes_project X 160929756 161063596 + MGP_129S1SvImJ_P0098035 Ctps2 protein_coding protein_coding MGP_129S1SvImJ_T0098036.1 MGP_129S1SvImJ_G0036243.1 mouse_genomes_project X 160929893 161063589 + MGP_129S1SvImJ_P0098036 Ctps2 protein_coding protein_coding MGP_129S1SvImJ_T0098037.1 MGP_129S1SvImJ_G0036243.1 mouse_genomes_project X 160929909 160931695 + Ctps2 protein_coding processed_transcript MGP_129S1SvImJ_T0098038.1 MGP_129S1SvImJ_G0036243.1 mouse_genomes_project X 160929994 161063413 + MGP_129S1SvImJ_P0098038 Ctps2 protein_coding protein_coding MGP_129S1SvImJ_T0098039.1 MGP_129S1SvImJ_G0036243.1 mouse_genomes_project X 160930295 160953326 + Ctps2 protein_coding processed_transcript MGP_129S1SvImJ_T0098040.1 MGP_129S1SvImJ_G0036243.1 mouse_genomes_project X 160960640 160967694 + Ctps2 protein_coding processed_transcript MGP_129S1SvImJ_T0098041.1 MGP_129S1SvImJ_G0036243.1 mouse_genomes_project X 160972116 161011239 + Ctps2 protein_coding processed_transcript MGP_129S1SvImJ_T0098042.1 MGP_129S1SvImJ_G0036243.1 mouse_genomes_project X 160972497 160972787 + Ctps2 protein_coding processed_transcript MGP_129S1SvImJ_T0098043.1 MGP_129S1SvImJ_G0036243.1 mouse_genomes_project X 160972603 161065593 + MGP_129S1SvImJ_P0098043 Ctps2 protein_coding protein_coding MGP_129S1SvImJ_T0096131.1 MGP_129S1SvImJ_G0035723.1 mouse_genomes_project X 48606757 48631260 - MGP_129S1SvImJ_P0096131 Mospd1 protein_coding protein_coding MGP_129S1SvImJ_T0096132.1 MGP_129S1SvImJ_G0035723.1 mouse_genomes_project X 48606811 48631272 - MGP_129S1SvImJ_P0096132 Mospd1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0097428.1 MGP_129S1SvImJ_G0036082.1 mouse_genomes_project X 132388806 132403718 - MGP_129S1SvImJ_P0097428 protein_coding protein_coding MGP_129S1SvImJ_T0102864.1 MGP_129S1SvImJ_G0040696.1 mouse_genomes_project X 82526002 82527043 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0016214.1 MGP_129S1SvImJ_G0014303.1 mouse_genomes_project X 6369588 6369804 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016717.1 MGP_129S1SvImJ_G0014806.1 mouse_genomes_project X 126551374 126552376 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011155.1 MGP_129S1SvImJ_G0009271.1 mouse_genomes_project X 36690917 36691002 + Gm22413 miRNA miRNA MGP_129S1SvImJ_T0016894.1 MGP_129S1SvImJ_G0014983.1 mouse_genomes_project X 158641693 158641823 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101525.1 MGP_129S1SvImJ_G0039592.1 mouse_genomes_project X 78325192 78325329 - Gm24706 snoRNA snoRNA MGP_129S1SvImJ_T0096038.1 MGP_129S1SvImJ_G0035691.1 mouse_genomes_project X 43499955 43521382 + Bcorl1 protein_coding processed_transcript MGP_129S1SvImJ_T0096039.1 MGP_129S1SvImJ_G0035691.1 mouse_genomes_project X 43500112 43567706 + MGP_129S1SvImJ_P0096039 Bcorl1 protein_coding protein_coding MGP_129S1SvImJ_T0096040.1 MGP_129S1SvImJ_G0035691.1 mouse_genomes_project X 43520495 43538007 + MGP_129S1SvImJ_P0096040 Bcorl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096041.1 MGP_129S1SvImJ_G0035691.1 mouse_genomes_project X 43528214 43542840 + MGP_129S1SvImJ_P0096041 Bcorl1 protein_coding protein_coding MGP_129S1SvImJ_T0018671.1 MGP_129S1SvImJ_G0015782.1 mouse_genomes_project X 68802514 68810457 + processed_transcript processed_transcript MGP_129S1SvImJ_T0016298.1 MGP_129S1SvImJ_G0014387.1 mouse_genomes_project X 36960769 36961435 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095518.1 MGP_129S1SvImJ_G0035524.1 mouse_genomes_project X 2408553 2439645 + MGP_129S1SvImJ_P0095518 Gripap1 protein_coding protein_coding MGP_129S1SvImJ_T0095519.1 MGP_129S1SvImJ_G0035524.1 mouse_genomes_project X 2408782 2431561 + MGP_129S1SvImJ_P0095519 Gripap1 protein_coding protein_coding MGP_129S1SvImJ_T0095520.1 MGP_129S1SvImJ_G0035524.1 mouse_genomes_project X 2408783 2439641 + MGP_129S1SvImJ_P0095520 Gripap1 protein_coding protein_coding MGP_129S1SvImJ_T0095521.1 MGP_129S1SvImJ_G0035524.1 mouse_genomes_project X 2408794 2413333 + Gripap1 protein_coding retained_intron MGP_129S1SvImJ_T0095522.1 MGP_129S1SvImJ_G0035524.1 mouse_genomes_project X 2408796 2439641 + MGP_129S1SvImJ_P0095522 Gripap1 protein_coding protein_coding MGP_129S1SvImJ_T0095523.1 MGP_129S1SvImJ_G0035524.1 mouse_genomes_project X 2408800 2431561 + MGP_129S1SvImJ_P0095523 Gripap1 protein_coding protein_coding MGP_129S1SvImJ_T0095524.1 MGP_129S1SvImJ_G0035524.1 mouse_genomes_project X 2408806 2439034 + Gripap1 protein_coding processed_transcript MGP_129S1SvImJ_T0095525.1 MGP_129S1SvImJ_G0035524.1 mouse_genomes_project X 2417138 2429522 + Gripap1 protein_coding retained_intron MGP_129S1SvImJ_T0095526.1 MGP_129S1SvImJ_G0035524.1 mouse_genomes_project X 2428953 2429502 + Gripap1 protein_coding processed_transcript MGP_129S1SvImJ_T0095527.1 MGP_129S1SvImJ_G0035524.1 mouse_genomes_project X 2437996 2439641 + Gripap1 protein_coding retained_intron MGP_129S1SvImJ_T0011800.1 MGP_129S1SvImJ_G0009916.1 mouse_genomes_project X 142382762 142383084 + Gm26024 misc_RNA misc_RNA MGP_129S1SvImJ_T0098002.1 MGP_129S1SvImJ_G0036236.1 mouse_genomes_project X 159022911 159213350 + MGP_129S1SvImJ_P0098002 Scml2 protein_coding protein_coding MGP_129S1SvImJ_T0098003.1 MGP_129S1SvImJ_G0036236.1 mouse_genomes_project X 159022911 159213336 + MGP_129S1SvImJ_P0098003 Scml2 protein_coding protein_coding MGP_129S1SvImJ_T0098004.1 MGP_129S1SvImJ_G0036236.1 mouse_genomes_project X 159121585 159213402 + MGP_129S1SvImJ_P0098004 Scml2 protein_coding protein_coding MGP_129S1SvImJ_T0098005.1 MGP_129S1SvImJ_G0036236.1 mouse_genomes_project X 159121607 159214663 + MGP_129S1SvImJ_P0098005 Scml2 protein_coding protein_coding MGP_129S1SvImJ_T0098006.1 MGP_129S1SvImJ_G0036236.1 mouse_genomes_project X 159121607 159214646 + MGP_129S1SvImJ_P0098006 Scml2 protein_coding protein_coding MGP_129S1SvImJ_T0098007.1 MGP_129S1SvImJ_G0036236.1 mouse_genomes_project X 159121895 159212253 + MGP_129S1SvImJ_P0098007 Scml2 protein_coding protein_coding MGP_129S1SvImJ_T0098008.1 MGP_129S1SvImJ_G0036236.1 mouse_genomes_project X 159186629 159196159 + Scml2 protein_coding processed_transcript MGP_129S1SvImJ_T0097305.1 MGP_129S1SvImJ_G0036045.1 mouse_genomes_project X 117167281 117811495 + MGP_129S1SvImJ_P0097305 Pcdh11x protein_coding protein_coding MGP_129S1SvImJ_T0097306.1 MGP_129S1SvImJ_G0036045.1 mouse_genomes_project X 117167281 117811495 + MGP_129S1SvImJ_P0097306 Pcdh11x protein_coding protein_coding MGP_129S1SvImJ_T0097307.1 MGP_129S1SvImJ_G0036045.1 mouse_genomes_project X 117167349 117169494 + Pcdh11x protein_coding retained_intron MGP_129S1SvImJ_T0097308.1 MGP_129S1SvImJ_G0036045.1 mouse_genomes_project X 117167349 117815770 + MGP_129S1SvImJ_P0097308 Pcdh11x protein_coding protein_coding MGP_129S1SvImJ_T0097309.1 MGP_129S1SvImJ_G0036045.1 mouse_genomes_project X 117167425 117811495 + MGP_129S1SvImJ_P0097309 Pcdh11x protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097311.1 MGP_129S1SvImJ_G0036045.1 mouse_genomes_project X 117244109 117815758 + MGP_129S1SvImJ_P0097311 Pcdh11x protein_coding protein_coding MGP_129S1SvImJ_T0097312.1 MGP_129S1SvImJ_G0036045.1 mouse_genomes_project X 117244882 117298863 + MGP_129S1SvImJ_P0097312 Pcdh11x protein_coding protein_coding MGP_129S1SvImJ_T0097313.1 MGP_129S1SvImJ_G0036045.1 mouse_genomes_project X 117288491 117811493 + MGP_129S1SvImJ_P0097313 Pcdh11x protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097314.1 MGP_129S1SvImJ_G0036045.1 mouse_genomes_project X 117288491 117811495 + MGP_129S1SvImJ_P0097314 Pcdh11x protein_coding protein_coding MGP_129S1SvImJ_T0016246.1 MGP_129S1SvImJ_G0014335.1 mouse_genomes_project X 14265946 14266442 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016782.1 MGP_129S1SvImJ_G0014871.1 mouse_genomes_project X 139114273 139114783 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011141.1 MGP_129S1SvImJ_G0009257.1 mouse_genomes_project X 1837912 1838008 - Mir532 miRNA miRNA MGP_129S1SvImJ_T0016521.1 MGP_129S1SvImJ_G0014610.1 mouse_genomes_project X 89894387 89897124 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016749.1 MGP_129S1SvImJ_G0014838.1 mouse_genomes_project X 133943714 133944159 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095897.1 MGP_129S1SvImJ_G0035646.1 mouse_genomes_project X 32648373 32652612 - MGP_129S1SvImJ_P0095897 Rhox2h protein_coding protein_coding MGP_129S1SvImJ_T0016477.1 MGP_129S1SvImJ_G0014566.1 mouse_genomes_project X 81498171 81498497 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016604.1 MGP_129S1SvImJ_G0014693.1 mouse_genomes_project X 100464590 100464898 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096186.1 MGP_129S1SvImJ_G0035747.1 mouse_genomes_project X 52557779 52567170 - Arhgef6 protein_coding retained_intron MGP_129S1SvImJ_T0096187.1 MGP_129S1SvImJ_G0035747.1 mouse_genomes_project X 52557779 52670560 - MGP_129S1SvImJ_P0096187 Arhgef6 protein_coding protein_coding MGP_129S1SvImJ_T0096188.1 MGP_129S1SvImJ_G0035747.1 mouse_genomes_project X 52559734 52610155 - MGP_129S1SvImJ_P0096188 Arhgef6 protein_coding protein_coding MGP_129S1SvImJ_T0096189.1 MGP_129S1SvImJ_G0035747.1 mouse_genomes_project X 52565510 52578099 - MGP_129S1SvImJ_P0096189 Arhgef6 protein_coding protein_coding MGP_129S1SvImJ_T0096190.1 MGP_129S1SvImJ_G0035747.1 mouse_genomes_project X 52575737 52658428 - MGP_129S1SvImJ_P0096190 Arhgef6 protein_coding protein_coding MGP_129S1SvImJ_T0096191.1 MGP_129S1SvImJ_G0035747.1 mouse_genomes_project X 52600803 52658430 - Arhgef6 protein_coding retained_intron MGP_129S1SvImJ_T0096192.1 MGP_129S1SvImJ_G0035747.1 mouse_genomes_project X 52630346 52632694 - Arhgef6 protein_coding processed_transcript MGP_129S1SvImJ_T0096193.1 MGP_129S1SvImJ_G0035747.1 mouse_genomes_project X 52667734 52670337 - Arhgef6 protein_coding retained_intron MGP_129S1SvImJ_T0097532.1 MGP_129S1SvImJ_G0036117.1 mouse_genomes_project X 136381921 136484725 + MGP_129S1SvImJ_P0097532 Nrk protein_coding protein_coding MGP_129S1SvImJ_T0097533.1 MGP_129S1SvImJ_G0036117.1 mouse_genomes_project X 136381922 136442003 + Nrk protein_coding processed_transcript MGP_129S1SvImJ_T0097534.1 MGP_129S1SvImJ_G0036117.1 mouse_genomes_project X 136381922 136486165 + MGP_129S1SvImJ_P0097534 Nrk protein_coding protein_coding MGP_129S1SvImJ_T0097535.1 MGP_129S1SvImJ_G0036117.1 mouse_genomes_project X 136381922 136485437 + MGP_129S1SvImJ_P0097535 Nrk protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097536.1 MGP_129S1SvImJ_G0036117.1 mouse_genomes_project X 136458340 136465401 + Nrk protein_coding retained_intron MGP_129S1SvImJ_T0096836.1 MGP_129S1SvImJ_G0035909.1 mouse_genomes_project X 90632512 90636071 + Klhl15 protein_coding processed_transcript MGP_129S1SvImJ_T0096837.1 MGP_129S1SvImJ_G0035909.1 mouse_genomes_project X 90632517 90651005 + MGP_129S1SvImJ_P0096837 Klhl15 protein_coding protein_coding MGP_129S1SvImJ_T0096838.1 MGP_129S1SvImJ_G0035909.1 mouse_genomes_project X 90632840 90652328 + MGP_129S1SvImJ_P0096838 Klhl15 protein_coding protein_coding MGP_129S1SvImJ_T0096839.1 MGP_129S1SvImJ_G0035909.1 mouse_genomes_project X 90632843 90671802 + MGP_129S1SvImJ_P0096839 Klhl15 protein_coding protein_coding MGP_129S1SvImJ_T0096840.1 MGP_129S1SvImJ_G0035909.1 mouse_genomes_project X 90632900 90654233 + MGP_129S1SvImJ_P0096840 Klhl15 protein_coding protein_coding MGP_129S1SvImJ_T0096841.1 MGP_129S1SvImJ_G0035909.1 mouse_genomes_project X 90632903 90671031 + Klhl15 protein_coding retained_intron MGP_129S1SvImJ_T0096842.1 MGP_129S1SvImJ_G0035909.1 mouse_genomes_project X 90632903 90652332 + MGP_129S1SvImJ_P0096842 Klhl15 protein_coding protein_coding MGP_129S1SvImJ_T0096843.1 MGP_129S1SvImJ_G0035909.1 mouse_genomes_project X 90633224 90671796 + MGP_129S1SvImJ_P0096843 Klhl15 protein_coding protein_coding MGP_129S1SvImJ_T0096844.1 MGP_129S1SvImJ_G0035909.1 mouse_genomes_project X 90633724 90675988 + MGP_129S1SvImJ_P0096844 Klhl15 protein_coding protein_coding MGP_129S1SvImJ_T0016452.1 MGP_129S1SvImJ_G0014541.1 mouse_genomes_project X 74278345 74281978 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011151.1 MGP_129S1SvImJ_G0009267.1 mouse_genomes_project X 31293338 31293475 - Gm44485 miRNA miRNA MGP_129S1SvImJ_T0018702.1 MGP_129S1SvImJ_G0015790.1 mouse_genomes_project X 131043889 131046392 - 4930570D08Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0016235.1 MGP_129S1SvImJ_G0014324.1 mouse_genomes_project X 10395633 10396175 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098047.1 MGP_129S1SvImJ_G0036247.1 mouse_genomes_project X 161981200 162007017 + MGP_129S1SvImJ_P0098047 Ap1s2 protein_coding protein_coding MGP_129S1SvImJ_T0098048.1 MGP_129S1SvImJ_G0036247.1 mouse_genomes_project X 161981325 162006710 + MGP_129S1SvImJ_P0098048 Ap1s2 protein_coding protein_coding MGP_129S1SvImJ_T0098049.1 MGP_129S1SvImJ_G0036247.1 mouse_genomes_project X 161981328 162002897 + MGP_129S1SvImJ_P0098049 Ap1s2 protein_coding protein_coding MGP_129S1SvImJ_T0098050.1 MGP_129S1SvImJ_G0036247.1 mouse_genomes_project X 161983584 162006707 + MGP_129S1SvImJ_P0098050 Ap1s2 protein_coding protein_coding MGP_129S1SvImJ_T0016878.1 MGP_129S1SvImJ_G0014967.1 mouse_genomes_project X 156151362 156151936 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097946.1 MGP_129S1SvImJ_G0036226.1 mouse_genomes_project X 157428272 157457213 + MGP_129S1SvImJ_P0097946 A830080D01Rik protein_coding protein_coding MGP_129S1SvImJ_T0097947.1 MGP_129S1SvImJ_G0036226.1 mouse_genomes_project X 157434046 157498732 + MGP_129S1SvImJ_P0097947 A830080D01Rik protein_coding protein_coding MGP_129S1SvImJ_T0097948.1 MGP_129S1SvImJ_G0036226.1 mouse_genomes_project X 157434192 157498719 + MGP_129S1SvImJ_P0097948 A830080D01Rik protein_coding protein_coding MGP_129S1SvImJ_T0097949.1 MGP_129S1SvImJ_G0036226.1 mouse_genomes_project X 157446674 157457263 + MGP_129S1SvImJ_P0097949 A830080D01Rik protein_coding protein_coding MGP_129S1SvImJ_T0097950.1 MGP_129S1SvImJ_G0036226.1 mouse_genomes_project X 157472189 157497853 + A830080D01Rik protein_coding processed_transcript MGP_129S1SvImJ_T0097951.1 MGP_129S1SvImJ_G0036226.1 mouse_genomes_project X 157472878 157480438 + A830080D01Rik protein_coding retained_intron MGP_129S1SvImJ_T0096136.1 MGP_129S1SvImJ_G0035726.1 mouse_genomes_project X 48867648 48868049 + MGP_129S1SvImJ_P0096136 Cxx1c protein_coding protein_coding MGP_129S1SvImJ_T0098684.1 MGP_129S1SvImJ_G0036769.1 mouse_genomes_project X 79305643 79305760 + n-R5s9 rRNA rRNA MGP_129S1SvImJ_T0005637.1 MGP_129S1SvImJ_G0004750.1 mouse_genomes_project X 158460613 158468357 - antisense antisense MGP_129S1SvImJ_T0096536.1 MGP_129S1SvImJ_G0035835.1 mouse_genomes_project X 70045325 70048526 + MGP_129S1SvImJ_P0096536 Emd protein_coding protein_coding MGP_129S1SvImJ_T0096537.1 MGP_129S1SvImJ_G0035835.1 mouse_genomes_project X 70045390 70048000 + MGP_129S1SvImJ_P0096537 Emd protein_coding protein_coding MGP_129S1SvImJ_T0096538.1 MGP_129S1SvImJ_G0035835.1 mouse_genomes_project X 70045399 70046324 + Emd protein_coding processed_transcript MGP_129S1SvImJ_T0096539.1 MGP_129S1SvImJ_G0035835.1 mouse_genomes_project X 70045448 70051644 + MGP_129S1SvImJ_P0096539 Emd protein_coding protein_coding MGP_129S1SvImJ_T0096540.1 MGP_129S1SvImJ_G0035835.1 mouse_genomes_project X 70045454 70047962 + MGP_129S1SvImJ_P0096540 Emd protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096541.1 MGP_129S1SvImJ_G0035835.1 mouse_genomes_project X 70045468 70052243 + MGP_129S1SvImJ_P0096541 Emd protein_coding protein_coding MGP_129S1SvImJ_T0095787.1 MGP_129S1SvImJ_G0035598.1 mouse_genomes_project X 15755946 15824223 - MGP_129S1SvImJ_P0095787 Syn1 protein_coding protein_coding MGP_129S1SvImJ_T0095788.1 MGP_129S1SvImJ_G0035598.1 mouse_genomes_project X 15755950 15824137 - MGP_129S1SvImJ_P0095788 Syn1 protein_coding protein_coding MGP_129S1SvImJ_T0016497.1 MGP_129S1SvImJ_G0014586.1 mouse_genomes_project X 85238577 85238850 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096713.1 MGP_129S1SvImJ_G0035861.1 mouse_genomes_project X 71363816 71373653 + MGP_129S1SvImJ_P0096713 Vbp1 protein_coding protein_coding MGP_129S1SvImJ_T0096714.1 MGP_129S1SvImJ_G0035861.1 mouse_genomes_project X 71363816 71384629 + MGP_129S1SvImJ_P0096714 Vbp1 protein_coding protein_coding MGP_129S1SvImJ_T0096715.1 MGP_129S1SvImJ_G0035861.1 mouse_genomes_project X 71363834 71371360 + Vbp1 protein_coding retained_intron MGP_129S1SvImJ_T0097250.1 MGP_129S1SvImJ_G0036024.1 mouse_genomes_project X 107689955 107692883 + MGP_129S1SvImJ_P0097250 Pou3f4 protein_coding protein_coding MGP_129S1SvImJ_T0016549.1 MGP_129S1SvImJ_G0014638.1 mouse_genomes_project X 92943188 92944896 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011246.1 MGP_129S1SvImJ_G0009362.1 mouse_genomes_project X 149665207 149665290 + Mirlet7f-2 miRNA miRNA MGP_129S1SvImJ_T0095887.1 MGP_129S1SvImJ_G0035637.1 mouse_genomes_project X 32165682 32177860 - MGP_129S1SvImJ_P0095887 Rhox1 protein_coding protein_coding MGP_129S1SvImJ_T0016371.1 MGP_129S1SvImJ_G0014460.1 mouse_genomes_project X 57031579 57032157 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011169.1 MGP_129S1SvImJ_G0009285.1 mouse_genomes_project X 48294381 48294466 - Mir542 miRNA miRNA MGP_129S1SvImJ_T0011171.1 MGP_129S1SvImJ_G0009287.1 mouse_genomes_project X 48298948 48299019 - Mir503 miRNA miRNA MGP_129S1SvImJ_T0016297.1 MGP_129S1SvImJ_G0014386.1 mouse_genomes_project X 36777088 36778395 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101522.1 MGP_129S1SvImJ_G0039589.1 mouse_genomes_project X 71750004 71750131 + Gm23320 snoRNA snoRNA MGP_129S1SvImJ_T0097874.1 MGP_129S1SvImJ_G0036202.1 mouse_genomes_project X 152179397 152183565 - MGP_129S1SvImJ_P0097874 4930524N10Rik protein_coding protein_coding MGP_129S1SvImJ_T0095973.1 MGP_129S1SvImJ_G0035674.1 mouse_genomes_project X 37121132 37135001 + Xiap protein_coding processed_transcript MGP_129S1SvImJ_T0095974.1 MGP_129S1SvImJ_G0035674.1 mouse_genomes_project X 37129289 37174700 + MGP_129S1SvImJ_P0095974 Xiap protein_coding protein_coding MGP_129S1SvImJ_T0095975.1 MGP_129S1SvImJ_G0035674.1 mouse_genomes_project X 37130761 37174700 + MGP_129S1SvImJ_P0095975 Xiap protein_coding protein_coding MGP_129S1SvImJ_T0095976.1 MGP_129S1SvImJ_G0035674.1 mouse_genomes_project X 37130773 37135001 + Xiap protein_coding processed_transcript MGP_129S1SvImJ_T0095977.1 MGP_129S1SvImJ_G0035674.1 mouse_genomes_project X 37131118 37174700 + Xiap protein_coding processed_transcript MGP_129S1SvImJ_T0095978.1 MGP_129S1SvImJ_G0035674.1 mouse_genomes_project X 37133688 37174700 + MGP_129S1SvImJ_P0095978 Xiap protein_coding protein_coding MGP_129S1SvImJ_T0095979.1 MGP_129S1SvImJ_G0035674.1 mouse_genomes_project X 37158773 37174700 + MGP_129S1SvImJ_P0095979 Xiap protein_coding protein_coding MGP_129S1SvImJ_T0096803.1 MGP_129S1SvImJ_G0035896.1 mouse_genomes_project X 86195343 86198098 - MGP_129S1SvImJ_P0096803 4930415L06Rik protein_coding protein_coding MGP_129S1SvImJ_T0096178.1 MGP_129S1SvImJ_G0035744.1 mouse_genomes_project X 52370810 52374434 + MGP_129S1SvImJ_P0096178 Htatsf1 protein_coding protein_coding MGP_129S1SvImJ_T0096179.1 MGP_129S1SvImJ_G0035744.1 mouse_genomes_project X 52370842 52384411 + MGP_129S1SvImJ_P0096179 Htatsf1 protein_coding protein_coding MGP_129S1SvImJ_T0096180.1 MGP_129S1SvImJ_G0035744.1 mouse_genomes_project X 52371125 52374432 + Htatsf1 protein_coding retained_intron MGP_129S1SvImJ_T0009378.1 MGP_129S1SvImJ_G0007531.1 mouse_genomes_project X 16225442 16251420 - Gm6938 lincRNA lincRNA MGP_129S1SvImJ_T0016308.1 MGP_129S1SvImJ_G0014397.1 mouse_genomes_project X 39377208 39377656 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005611.1 MGP_129S1SvImJ_G0004730.1 mouse_genomes_project X 65550570 65774889 - antisense antisense MGP_129S1SvImJ_T0097878.1 MGP_129S1SvImJ_G0036206.1 mouse_genomes_project X 152902462 152903220 - MGP_129S1SvImJ_P0097878 protein_coding protein_coding MGP_129S1SvImJ_T0096357.1 MGP_129S1SvImJ_G0035810.1 mouse_genomes_project X 69184804 69211969 - MGP_129S1SvImJ_P0096357 Haus7 protein_coding protein_coding MGP_129S1SvImJ_T0096358.1 MGP_129S1SvImJ_G0035810.1 mouse_genomes_project X 69184804 69211969 - MGP_129S1SvImJ_P0096358 Haus7 protein_coding protein_coding MGP_129S1SvImJ_T0096359.1 MGP_129S1SvImJ_G0035810.1 mouse_genomes_project X 69184806 69195829 - Haus7 protein_coding processed_transcript MGP_129S1SvImJ_T0097607.1 MGP_129S1SvImJ_G0036139.1 mouse_genomes_project X 138526028 138534308 - MGP_129S1SvImJ_P0097607 Psmd10 protein_coding protein_coding MGP_129S1SvImJ_T0016472.1 MGP_129S1SvImJ_G0014561.1 mouse_genomes_project X 78685277 78686352 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097244.1 MGP_129S1SvImJ_G0036021.1 mouse_genomes_project X 105854171 105862489 - MGP_129S1SvImJ_P0097244 Hmgn5 protein_coding protein_coding MGP_129S1SvImJ_T0096275.1 MGP_129S1SvImJ_G0035780.1 mouse_genomes_project X 66682270 66787148 + MGP_129S1SvImJ_P0096275 Mamld1 protein_coding protein_coding MGP_129S1SvImJ_T0096276.1 MGP_129S1SvImJ_G0035780.1 mouse_genomes_project X 66682270 66788487 + MGP_129S1SvImJ_P0096276 Mamld1 protein_coding protein_coding MGP_129S1SvImJ_T0016384.1 MGP_129S1SvImJ_G0014473.1 mouse_genomes_project X 59547977 59548330 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016519.1 MGP_129S1SvImJ_G0014608.1 mouse_genomes_project X 88795410 88795586 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100263.1 MGP_129S1SvImJ_G0038330.1 mouse_genomes_project X 97739279 97739413 + Gm22472 snRNA snRNA MGP_129S1SvImJ_T0016603.1 MGP_129S1SvImJ_G0014692.1 mouse_genomes_project X 100446365 100446851 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096796.1 MGP_129S1SvImJ_G0035892.1 mouse_genomes_project X 82297453 82301697 + MGP_129S1SvImJ_P0096796 Nr0b1 protein_coding protein_coding MGP_129S1SvImJ_T0095734.1 MGP_129S1SvImJ_G0035588.1 mouse_genomes_project X 14974678 15161589 - MGP_129S1SvImJ_P0095734 Slc9a7 protein_coding protein_coding MGP_129S1SvImJ_T0095735.1 MGP_129S1SvImJ_G0035588.1 mouse_genomes_project X 14974886 15161466 - MGP_129S1SvImJ_P0095735 Slc9a7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0095736.1 MGP_129S1SvImJ_G0035588.1 mouse_genomes_project X 14988810 15161568 - Slc9a7 protein_coding retained_intron MGP_129S1SvImJ_T0095737.1 MGP_129S1SvImJ_G0035588.1 mouse_genomes_project X 15024422 15161552 - MGP_129S1SvImJ_P0095737 Slc9a7 protein_coding protein_coding MGP_129S1SvImJ_T0095738.1 MGP_129S1SvImJ_G0035588.1 mouse_genomes_project X 15034897 15161589 - Slc9a7 protein_coding retained_intron MGP_129S1SvImJ_T0096782.1 MGP_129S1SvImJ_G0035888.1 mouse_genomes_project X 81645529 81686800 + MGP_129S1SvImJ_P0096782 protein_coding protein_coding MGP_129S1SvImJ_T0096783.1 MGP_129S1SvImJ_G0035888.1 mouse_genomes_project X 81645534 81647121 + protein_coding processed_transcript MGP_129S1SvImJ_T0096784.1 MGP_129S1SvImJ_G0035888.1 mouse_genomes_project X 81645645 81686590 + MGP_129S1SvImJ_P0096784 protein_coding protein_coding MGP_129S1SvImJ_T0096785.1 MGP_129S1SvImJ_G0035888.1 mouse_genomes_project X 81645784 81708113 + MGP_129S1SvImJ_P0096785 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0097699.1 MGP_129S1SvImJ_G0036167.1 mouse_genomes_project X 148116738 148159726 - MGP_129S1SvImJ_P0097699 Tmem29 protein_coding protein_coding MGP_129S1SvImJ_T0097700.1 MGP_129S1SvImJ_G0036167.1 mouse_genomes_project X 148116738 148178343 - MGP_129S1SvImJ_P0097700 Tmem29 protein_coding protein_coding MGP_129S1SvImJ_T0097701.1 MGP_129S1SvImJ_G0036167.1 mouse_genomes_project X 148117760 148178343 - Tmem29 protein_coding processed_transcript MGP_129S1SvImJ_T0097702.1 MGP_129S1SvImJ_G0036167.1 mouse_genomes_project X 148127923 148178347 - Tmem29 protein_coding processed_transcript MGP_129S1SvImJ_T0097703.1 MGP_129S1SvImJ_G0036167.1 mouse_genomes_project X 148127923 148159695 - Tmem29 protein_coding processed_transcript MGP_129S1SvImJ_T0097704.1 MGP_129S1SvImJ_G0036167.1 mouse_genomes_project X 148127929 148159494 - MGP_129S1SvImJ_P0097704 Tmem29 protein_coding protein_coding MGP_129S1SvImJ_T0097705.1 MGP_129S1SvImJ_G0036167.1 mouse_genomes_project X 148128265 148178347 - Tmem29 protein_coding processed_transcript MGP_129S1SvImJ_T0097706.1 MGP_129S1SvImJ_G0036167.1 mouse_genomes_project X 148128451 148154111 - Tmem29 protein_coding processed_transcript MGP_129S1SvImJ_T0097707.1 MGP_129S1SvImJ_G0036167.1 mouse_genomes_project X 148128516 148159494 - Tmem29 protein_coding processed_transcript MGP_129S1SvImJ_T0097708.1 MGP_129S1SvImJ_G0036167.1 mouse_genomes_project X 148136307 148178347 - Tmem29 protein_coding retained_intron MGP_129S1SvImJ_T0097709.1 MGP_129S1SvImJ_G0036167.1 mouse_genomes_project X 148155737 148159752 - Tmem29 protein_coding processed_transcript MGP_129S1SvImJ_T0097710.1 MGP_129S1SvImJ_G0036167.1 mouse_genomes_project X 148156542 148159378 - Tmem29 protein_coding processed_transcript MGP_129S1SvImJ_T0016528.1 MGP_129S1SvImJ_G0014617.1 mouse_genomes_project X 90720579 90721527 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016421.1 MGP_129S1SvImJ_G0014510.1 mouse_genomes_project X 69058048 69058480 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016670.1 MGP_129S1SvImJ_G0014759.1 mouse_genomes_project X 112248145 112249068 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016616.1 MGP_129S1SvImJ_G0014705.1 mouse_genomes_project X 102475278 102475470 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096786.1 MGP_129S1SvImJ_G0035889.1 mouse_genomes_project X 81788567 81866620 - MGP_129S1SvImJ_P0096786 Gk protein_coding protein_coding MGP_129S1SvImJ_T0096787.1 MGP_129S1SvImJ_G0035889.1 mouse_genomes_project X 81788567 81866607 - MGP_129S1SvImJ_P0096787 Gk protein_coding protein_coding MGP_129S1SvImJ_T0096788.1 MGP_129S1SvImJ_G0035889.1 mouse_genomes_project X 81788567 81866802 - MGP_129S1SvImJ_P0096788 Gk protein_coding protein_coding MGP_129S1SvImJ_T0096789.1 MGP_129S1SvImJ_G0035889.1 mouse_genomes_project X 81788567 81866636 - MGP_129S1SvImJ_P0096789 Gk protein_coding protein_coding MGP_129S1SvImJ_T0096790.1 MGP_129S1SvImJ_G0035889.1 mouse_genomes_project X 81793626 81799137 - Gk protein_coding processed_transcript MGP_129S1SvImJ_T0096791.1 MGP_129S1SvImJ_G0035889.1 mouse_genomes_project X 81799056 81801120 - Gk protein_coding retained_intron MGP_129S1SvImJ_T0096792.1 MGP_129S1SvImJ_G0035889.1 mouse_genomes_project X 81799353 81827122 - Gk protein_coding retained_intron MGP_129S1SvImJ_T0096793.1 MGP_129S1SvImJ_G0035889.1 mouse_genomes_project X 81847874 81851335 - Gk protein_coding retained_intron MGP_129S1SvImJ_T0100299.1 MGP_129S1SvImJ_G0038366.1 mouse_genomes_project X 162354149 162354255 - Gm25367 snRNA snRNA MGP_129S1SvImJ_T0016777.1 MGP_129S1SvImJ_G0014866.1 mouse_genomes_project X 138367952 138370491 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016433.1 MGP_129S1SvImJ_G0014522.1 mouse_genomes_project X 70841533 70842549 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096808.1 MGP_129S1SvImJ_G0035901.1 mouse_genomes_project X 88470219 88970988 - MGP_129S1SvImJ_P0096808 Mageb18 protein_coding protein_coding MGP_129S1SvImJ_T0096809.1 MGP_129S1SvImJ_G0035901.1 mouse_genomes_project X 88470541 88472112 - MGP_129S1SvImJ_P0096809 Mageb18 protein_coding protein_coding MGP_129S1SvImJ_T0016448.1 MGP_129S1SvImJ_G0014537.1 mouse_genomes_project X 73531487 73533086 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101515.1 MGP_129S1SvImJ_G0039582.1 mouse_genomes_project X 64280655 64280783 - Gm22435 snoRNA snoRNA MGP_129S1SvImJ_T0095725.1 MGP_129S1SvImJ_G0035584.1 mouse_genomes_project X 13024970 13025815 + MGP_129S1SvImJ_P0095725 Dusp21 protein_coding protein_coding MGP_129S1SvImJ_T0095957.1 MGP_129S1SvImJ_G0035673.1 mouse_genomes_project X 36838676 36955232 - MGP_129S1SvImJ_P0095957 Thoc2 protein_coding protein_coding MGP_129S1SvImJ_T0095958.1 MGP_129S1SvImJ_G0035673.1 mouse_genomes_project X 36838676 36859123 - MGP_129S1SvImJ_P0095958 Thoc2 protein_coding protein_coding MGP_129S1SvImJ_T0095959.1 MGP_129S1SvImJ_G0035673.1 mouse_genomes_project X 36840793 36859497 - MGP_129S1SvImJ_P0095959 Thoc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095960.1 MGP_129S1SvImJ_G0035673.1 mouse_genomes_project X 36841167 36850693 - MGP_129S1SvImJ_P0095960 Thoc2 protein_coding protein_coding MGP_129S1SvImJ_T0095961.1 MGP_129S1SvImJ_G0035673.1 mouse_genomes_project X 36846043 36851181 - MGP_129S1SvImJ_P0095961 Thoc2 protein_coding protein_coding MGP_129S1SvImJ_T0095962.1 MGP_129S1SvImJ_G0035673.1 mouse_genomes_project X 36846055 36850845 - MGP_129S1SvImJ_P0095962 Thoc2 protein_coding protein_coding MGP_129S1SvImJ_T0095963.1 MGP_129S1SvImJ_G0035673.1 mouse_genomes_project X 36847227 36858592 - Thoc2 protein_coding processed_transcript MGP_129S1SvImJ_T0095964.1 MGP_129S1SvImJ_G0035673.1 mouse_genomes_project X 36856880 36859199 - Thoc2 protein_coding retained_intron MGP_129S1SvImJ_T0095965.1 MGP_129S1SvImJ_G0035673.1 mouse_genomes_project X 36859074 36905173 - Thoc2 protein_coding processed_transcript MGP_129S1SvImJ_T0095966.1 MGP_129S1SvImJ_G0035673.1 mouse_genomes_project X 36859470 36875760 - Thoc2 protein_coding retained_intron MGP_129S1SvImJ_T0095967.1 MGP_129S1SvImJ_G0035673.1 mouse_genomes_project X 36868235 36875825 - Thoc2 protein_coding retained_intron MGP_129S1SvImJ_T0095968.1 MGP_129S1SvImJ_G0035673.1 mouse_genomes_project X 36902805 36955232 - Thoc2 protein_coding retained_intron MGP_129S1SvImJ_T0095969.1 MGP_129S1SvImJ_G0035673.1 mouse_genomes_project X 36906343 36955217 - MGP_129S1SvImJ_P0095969 Thoc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095970.1 MGP_129S1SvImJ_G0035673.1 mouse_genomes_project X 36920072 36965028 - MGP_129S1SvImJ_P0095970 Thoc2 protein_coding protein_coding MGP_129S1SvImJ_T0095971.1 MGP_129S1SvImJ_G0035673.1 mouse_genomes_project X 36920076 36941163 - MGP_129S1SvImJ_P0095971 Thoc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095972.1 MGP_129S1SvImJ_G0035673.1 mouse_genomes_project X 36927587 36942618 - Thoc2 protein_coding retained_intron MGP_129S1SvImJ_T0100296.1 MGP_129S1SvImJ_G0038363.1 mouse_genomes_project X 160877478 160877585 - Gm23901 snRNA snRNA MGP_129S1SvImJ_T0011148.1 MGP_129S1SvImJ_G0009264.1 mouse_genomes_project X 15717612 15717690 - Gm24824 miRNA miRNA MGP_129S1SvImJ_T0016360.1 MGP_129S1SvImJ_G0014449.1 mouse_genomes_project X 55954735 55956668 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097230.1 MGP_129S1SvImJ_G0036016.1 mouse_genomes_project X 104625627 104661674 - MGP_129S1SvImJ_P0097230 2610002M06Rik protein_coding protein_coding MGP_129S1SvImJ_T0097231.1 MGP_129S1SvImJ_G0036016.1 mouse_genomes_project X 104630713 104639482 - 2610002M06Rik protein_coding retained_intron MGP_129S1SvImJ_T0100236.1 MGP_129S1SvImJ_G0038303.1 mouse_genomes_project X 31323648 31323746 - Gm22364 snRNA snRNA MGP_129S1SvImJ_T0095789.1 MGP_129S1SvImJ_G0035599.1 mouse_genomes_project X 15765601 15770169 + MGP_129S1SvImJ_P0095789 Timp1 protein_coding protein_coding MGP_129S1SvImJ_T0095790.1 MGP_129S1SvImJ_G0035599.1 mouse_genomes_project X 15765656 15770171 + MGP_129S1SvImJ_P0095790 Timp1 protein_coding protein_coding MGP_129S1SvImJ_T0016689.1 MGP_129S1SvImJ_G0014778.1 mouse_genomes_project X 116248483 116249221 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096244.1 MGP_129S1SvImJ_G0035770.1 mouse_genomes_project X 63293488 63303925 + MGP_129S1SvImJ_P0096244 Gm14692 protein_coding protein_coding MGP_129S1SvImJ_T0016226.1 MGP_129S1SvImJ_G0014315.1 mouse_genomes_project X 8100464 8101691 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005624.1 MGP_129S1SvImJ_G0004742.1 mouse_genomes_project X 100022882 100024095 - Gm26952 antisense antisense MGP_129S1SvImJ_T0016660.1 MGP_129S1SvImJ_G0014749.1 mouse_genomes_project X 110802033 110803384 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095478.1 MGP_129S1SvImJ_G0035519.1 mouse_genomes_project X 2310404 2323533 + MGP_129S1SvImJ_P0095478 Gpkow protein_coding protein_coding MGP_129S1SvImJ_T0095479.1 MGP_129S1SvImJ_G0035519.1 mouse_genomes_project X 2319116 2321471 + Gpkow protein_coding retained_intron MGP_129S1SvImJ_T0097420.1 MGP_129S1SvImJ_G0036079.1 mouse_genomes_project X 132145476 132157308 - Nxf2 protein_coding retained_intron MGP_129S1SvImJ_T0097421.1 MGP_129S1SvImJ_G0036079.1 mouse_genomes_project X 132145478 132166108 - MGP_129S1SvImJ_P0097421 Nxf2 protein_coding protein_coding MGP_129S1SvImJ_T0097422.1 MGP_129S1SvImJ_G0036079.1 mouse_genomes_project X 132145478 132166108 - MGP_129S1SvImJ_P0097422 Nxf2 protein_coding protein_coding MGP_129S1SvImJ_T0097423.1 MGP_129S1SvImJ_G0036079.1 mouse_genomes_project X 132145478 132165250 - MGP_129S1SvImJ_P0097423 Nxf2 protein_coding protein_coding MGP_129S1SvImJ_T0102852.1 MGP_129S1SvImJ_G0040684.1 mouse_genomes_project X 68986234 68995676 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0097623.1 MGP_129S1SvImJ_G0036147.1 mouse_genomes_project X 139582245 139698870 - MGP_129S1SvImJ_P0097623 Gucy2f protein_coding protein_coding MGP_129S1SvImJ_T0097624.1 MGP_129S1SvImJ_G0036147.1 mouse_genomes_project X 139586703 139691681 - MGP_129S1SvImJ_P0097624 Gucy2f protein_coding unknown_likely_coding MGP_129S1SvImJ_T0096859.1 MGP_129S1SvImJ_G0035914.1 mouse_genomes_project X 91156514 91161095 + MGP_129S1SvImJ_P0096859 Zxdb protein_coding protein_coding MGP_129S1SvImJ_T0101552.1 MGP_129S1SvImJ_G0039619.1 mouse_genomes_project X 149292426 149292532 - Gm24460 snoRNA snoRNA MGP_129S1SvImJ_T0101547.1 MGP_129S1SvImJ_G0039614.1 mouse_genomes_project X 139998704 139998830 - Gm25915 snoRNA snoRNA MGP_129S1SvImJ_T0011149.1 MGP_129S1SvImJ_G0009265.1 mouse_genomes_project X 15758561 15758618 - Mir5617 miRNA miRNA MGP_129S1SvImJ_T0096997.1 MGP_129S1SvImJ_G0035951.1 mouse_genomes_project X 97561390 97569571 - Slc7a3 protein_coding retained_intron MGP_129S1SvImJ_T0096998.1 MGP_129S1SvImJ_G0035951.1 mouse_genomes_project X 97561401 97569518 - MGP_129S1SvImJ_P0096998 Slc7a3 protein_coding protein_coding MGP_129S1SvImJ_T0096999.1 MGP_129S1SvImJ_G0035951.1 mouse_genomes_project X 97561402 97568193 - MGP_129S1SvImJ_P0096999 Slc7a3 protein_coding protein_coding MGP_129S1SvImJ_T0097000.1 MGP_129S1SvImJ_G0035951.1 mouse_genomes_project X 97561402 97569538 - MGP_129S1SvImJ_P0097000 Slc7a3 protein_coding protein_coding MGP_129S1SvImJ_T0097001.1 MGP_129S1SvImJ_G0035951.1 mouse_genomes_project X 97561986 97566348 - Slc7a3 protein_coding processed_transcript MGP_129S1SvImJ_T0097002.1 MGP_129S1SvImJ_G0035951.1 mouse_genomes_project X 97563750 97564414 - Slc7a3 protein_coding retained_intron MGP_129S1SvImJ_T0097003.1 MGP_129S1SvImJ_G0035951.1 mouse_genomes_project X 97563938 97564640 - Slc7a3 protein_coding retained_intron MGP_129S1SvImJ_T0011177.1 MGP_129S1SvImJ_G0009293.1 mouse_genomes_project X 56552461 56552554 + Gm24396 miRNA miRNA MGP_129S1SvImJ_T0102867.1 MGP_129S1SvImJ_G0040699.1 mouse_genomes_project X 88446105 88447149 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0100294.1 MGP_129S1SvImJ_G0038361.1 mouse_genomes_project X 154941113 154941277 + Gm22666 snRNA snRNA MGP_129S1SvImJ_T0016860.1 MGP_129S1SvImJ_G0014949.1 mouse_genomes_project X 153404173 153404941 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096261.1 MGP_129S1SvImJ_G0035774.1 mouse_genomes_project X 64981655 65487592 + MGP_129S1SvImJ_P0096261 Aff2 protein_coding protein_coding MGP_129S1SvImJ_T0096262.1 MGP_129S1SvImJ_G0035774.1 mouse_genomes_project X 64981866 65173002 + Aff2 protein_coding processed_transcript MGP_129S1SvImJ_T0096263.1 MGP_129S1SvImJ_G0035774.1 mouse_genomes_project X 64982061 65404043 + Aff2 protein_coding processed_transcript MGP_129S1SvImJ_T0096264.1 MGP_129S1SvImJ_G0035774.1 mouse_genomes_project X 65476232 65486331 + Aff2 protein_coding retained_intron MGP_129S1SvImJ_T0096372.1 MGP_129S1SvImJ_G0035814.1 mouse_genomes_project X 69424225 69427958 - MGP_129S1SvImJ_P0096372 Pnck protein_coding protein_coding MGP_129S1SvImJ_T0096373.1 MGP_129S1SvImJ_G0035814.1 mouse_genomes_project X 69424225 69428062 - MGP_129S1SvImJ_P0096373 Pnck protein_coding protein_coding MGP_129S1SvImJ_T0096374.1 MGP_129S1SvImJ_G0035814.1 mouse_genomes_project X 69424226 69428357 - MGP_129S1SvImJ_P0096374 Pnck protein_coding protein_coding MGP_129S1SvImJ_T0096375.1 MGP_129S1SvImJ_G0035814.1 mouse_genomes_project X 69424482 69426063 - Pnck protein_coding retained_intron MGP_129S1SvImJ_T0096376.1 MGP_129S1SvImJ_G0035814.1 mouse_genomes_project X 69425507 69427667 - MGP_129S1SvImJ_P0096376 Pnck protein_coding protein_coding MGP_129S1SvImJ_T0101532.1 MGP_129S1SvImJ_G0039599.1 mouse_genomes_project X 101347936 101348043 + Gm22430 snoRNA snoRNA MGP_129S1SvImJ_T0011191.1 MGP_129S1SvImJ_G0009307.1 mouse_genomes_project X 62419379 62419437 - Mir465d miRNA miRNA MGP_129S1SvImJ_T0016672.1 MGP_129S1SvImJ_G0014761.1 mouse_genomes_project X 112459645 112460036 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102859.1 MGP_129S1SvImJ_G0040691.1 mouse_genomes_project X 73696023 73700450 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0016344.1 MGP_129S1SvImJ_G0014433.1 mouse_genomes_project X 52969613 52969859 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096171.1 MGP_129S1SvImJ_G0035742.1 mouse_genomes_project X 52178461 52291500 + MGP_129S1SvImJ_P0096171 protein_coding protein_coding MGP_129S1SvImJ_T0096172.1 MGP_129S1SvImJ_G0035742.1 mouse_genomes_project X 52180682 52291532 + MGP_129S1SvImJ_P0096172 protein_coding protein_coding MGP_129S1SvImJ_T0096173.1 MGP_129S1SvImJ_G0035742.1 mouse_genomes_project X 52196436 52314198 + MGP_129S1SvImJ_P0096173 protein_coding protein_coding MGP_129S1SvImJ_T0096174.1 MGP_129S1SvImJ_G0035742.1 mouse_genomes_project X 52220778 52221309 + MGP_129S1SvImJ_P0096174 protein_coding protein_coding MGP_129S1SvImJ_T0096175.1 MGP_129S1SvImJ_G0035742.1 mouse_genomes_project X 52272991 52291515 + MGP_129S1SvImJ_P0096175 protein_coding protein_coding MGP_129S1SvImJ_T0096176.1 MGP_129S1SvImJ_G0035742.1 mouse_genomes_project X 52277610 52291522 + MGP_129S1SvImJ_P0096176 protein_coding protein_coding MGP_129S1SvImJ_T0095881.1 MGP_129S1SvImJ_G0035632.1 mouse_genomes_project X 32076672 32100500 + MGP_129S1SvImJ_P0095881 Nkap protein_coding protein_coding MGP_129S1SvImJ_T0095882.1 MGP_129S1SvImJ_G0035632.1 mouse_genomes_project X 32086138 32091592 + Nkap protein_coding retained_intron MGP_129S1SvImJ_T0016594.1 MGP_129S1SvImJ_G0014683.1 mouse_genomes_project X 100132864 100133319 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096960.1 MGP_129S1SvImJ_G0035941.1 mouse_genomes_project X 96947896 96969645 + MGP_129S1SvImJ_P0096960 Igbp1 protein_coding protein_coding MGP_129S1SvImJ_T0096961.1 MGP_129S1SvImJ_G0035941.1 mouse_genomes_project X 96947960 96953003 + Igbp1 protein_coding retained_intron MGP_129S1SvImJ_T0016905.1 MGP_129S1SvImJ_G0014994.1 mouse_genomes_project X 161324690 161325156 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101549.1 MGP_129S1SvImJ_G0039616.1 mouse_genomes_project X 144599075 144599203 + Snora35 snoRNA snoRNA MGP_129S1SvImJ_T0011199.1 MGP_129S1SvImJ_G0009315.1 mouse_genomes_project X 67933938 67934020 - Mir224 miRNA miRNA MGP_129S1SvImJ_T0018675.1 MGP_129S1SvImJ_G0015786.1 mouse_genomes_project X 97796084 97821589 + Gm21986 processed_transcript processed_transcript MGP_129S1SvImJ_T0016653.1 MGP_129S1SvImJ_G0014742.1 mouse_genomes_project X 109528581 109531111 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095624.1 MGP_129S1SvImJ_G0035547.1 mouse_genomes_project X 3529613 3532198 + MGP_129S1SvImJ_P0095624 B630019K06Rik protein_coding protein_coding MGP_129S1SvImJ_T0101521.1 MGP_129S1SvImJ_G0039588.1 mouse_genomes_project X 70932351 70932469 + Gm25520 snoRNA snoRNA MGP_129S1SvImJ_T0016317.1 MGP_129S1SvImJ_G0014406.1 mouse_genomes_project X 42494209 42495111 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016736.1 MGP_129S1SvImJ_G0014825.1 mouse_genomes_project X 131735063 131735428 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016459.1 MGP_129S1SvImJ_G0014548.1 mouse_genomes_project X 74892221 74892443 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096765.1 MGP_129S1SvImJ_G0035884.1 mouse_genomes_project X 77342344 77380750 - MGP_129S1SvImJ_P0096765 4930595M18Rik protein_coding protein_coding MGP_129S1SvImJ_T0095677.1 MGP_129S1SvImJ_G0035569.1 mouse_genomes_project X 7500333 7588647 - MGP_129S1SvImJ_P0095677 Med14 protein_coding protein_coding MGP_129S1SvImJ_T0095678.1 MGP_129S1SvImJ_G0035569.1 mouse_genomes_project X 7503999 7542643 - MGP_129S1SvImJ_P0095678 Med14 protein_coding protein_coding MGP_129S1SvImJ_T0095679.1 MGP_129S1SvImJ_G0035569.1 mouse_genomes_project X 7504713 7588647 - Med14 protein_coding retained_intron MGP_129S1SvImJ_T0095680.1 MGP_129S1SvImJ_G0035569.1 mouse_genomes_project X 7532905 7540460 - Med14 protein_coding retained_intron MGP_129S1SvImJ_T0095681.1 MGP_129S1SvImJ_G0035569.1 mouse_genomes_project X 7535661 7588647 - MGP_129S1SvImJ_P0095681 Med14 protein_coding protein_coding MGP_129S1SvImJ_T0016220.1 MGP_129S1SvImJ_G0014309.1 mouse_genomes_project X 7269502 7269847 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011794.1 MGP_129S1SvImJ_G0009910.1 mouse_genomes_project X 130506020 130506356 - Gm22552 misc_RNA misc_RNA MGP_129S1SvImJ_T0097992.1 MGP_129S1SvImJ_G0036233.1 mouse_genomes_project X 158696236 158730704 + MGP_129S1SvImJ_P0097992 Rs1 protein_coding protein_coding MGP_129S1SvImJ_T0097993.1 MGP_129S1SvImJ_G0036233.1 mouse_genomes_project X 158696403 158725894 + MGP_129S1SvImJ_P0097993 Rs1 protein_coding protein_coding MGP_129S1SvImJ_T0097997.1 MGP_129S1SvImJ_G0036233.1 mouse_genomes_project X 158722541 158726391 + Rs1 protein_coding processed_transcript MGP_129S1SvImJ_T0097660.1 MGP_129S1SvImJ_G0036158.1 mouse_genomes_project X 141870632 141929423 + MGP_129S1SvImJ_P0097660 Alg13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097661.1 MGP_129S1SvImJ_G0036158.1 mouse_genomes_project X 141870635 141876735 + MGP_129S1SvImJ_P0097661 Alg13 protein_coding protein_coding MGP_129S1SvImJ_T0097662.1 MGP_129S1SvImJ_G0036158.1 mouse_genomes_project X 141870635 141892475 + MGP_129S1SvImJ_P0097662 Alg13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097663.1 MGP_129S1SvImJ_G0036158.1 mouse_genomes_project X 141870650 141929423 + MGP_129S1SvImJ_P0097663 Alg13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097664.1 MGP_129S1SvImJ_G0036158.1 mouse_genomes_project X 141870655 141876606 + Alg13 protein_coding processed_transcript MGP_129S1SvImJ_T0097665.1 MGP_129S1SvImJ_G0036158.1 mouse_genomes_project X 141870655 141929428 + MGP_129S1SvImJ_P0097665 Alg13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097666.1 MGP_129S1SvImJ_G0036158.1 mouse_genomes_project X 141870673 141876715 + MGP_129S1SvImJ_P0097666 Alg13 protein_coding protein_coding MGP_129S1SvImJ_T0097667.1 MGP_129S1SvImJ_G0036158.1 mouse_genomes_project X 141888570 141891738 + Alg13 protein_coding processed_transcript MGP_129S1SvImJ_T0097668.1 MGP_129S1SvImJ_G0036158.1 mouse_genomes_project X 141889195 141895080 + Alg13 protein_coding retained_intron MGP_129S1SvImJ_T0097669.1 MGP_129S1SvImJ_G0036158.1 mouse_genomes_project X 141889882 141929426 + MGP_129S1SvImJ_P0097669 Alg13 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0097670.1 MGP_129S1SvImJ_G0036158.1 mouse_genomes_project X 141891741 141929428 + Alg13 protein_coding processed_transcript MGP_129S1SvImJ_T0097671.1 MGP_129S1SvImJ_G0036158.1 mouse_genomes_project X 141893176 141898304 + Alg13 protein_coding retained_intron MGP_129S1SvImJ_T0097672.1 MGP_129S1SvImJ_G0036158.1 mouse_genomes_project X 141899386 141929428 + Alg13 protein_coding processed_transcript MGP_129S1SvImJ_T0097673.1 MGP_129S1SvImJ_G0036158.1 mouse_genomes_project X 141909128 141924749 + Alg13 protein_coding processed_transcript MGP_129S1SvImJ_T0095606.1 MGP_129S1SvImJ_G0035544.1 mouse_genomes_project X 2842761 2855485 - MGP_129S1SvImJ_P0095606 Porcn protein_coding protein_coding MGP_129S1SvImJ_T0095607.1 MGP_129S1SvImJ_G0035544.1 mouse_genomes_project X 2842762 2855451 - MGP_129S1SvImJ_P0095607 Porcn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095608.1 MGP_129S1SvImJ_G0035544.1 mouse_genomes_project X 2842763 2855461 - MGP_129S1SvImJ_P0095608 Porcn protein_coding protein_coding MGP_129S1SvImJ_T0095609.1 MGP_129S1SvImJ_G0035544.1 mouse_genomes_project X 2842763 2855461 - MGP_129S1SvImJ_P0095609 Porcn protein_coding protein_coding MGP_129S1SvImJ_T0095610.1 MGP_129S1SvImJ_G0035544.1 mouse_genomes_project X 2842763 2855461 - MGP_129S1SvImJ_P0095610 Porcn protein_coding protein_coding MGP_129S1SvImJ_T0095611.1 MGP_129S1SvImJ_G0035544.1 mouse_genomes_project X 2842766 2855457 - MGP_129S1SvImJ_P0095611 Porcn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095612.1 MGP_129S1SvImJ_G0035544.1 mouse_genomes_project X 2852398 2855473 - Porcn protein_coding retained_intron MGP_129S1SvImJ_T0016545.1 MGP_129S1SvImJ_G0014634.1 mouse_genomes_project X 91720259 91722369 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016218.1 MGP_129S1SvImJ_G0014307.1 mouse_genomes_project X 6777190 6777420 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096108.1 MGP_129S1SvImJ_G0035713.1 mouse_genomes_project X 46945195 46991563 - MGP_129S1SvImJ_P0096108 Usp26 protein_coding protein_coding MGP_129S1SvImJ_T0096109.1 MGP_129S1SvImJ_G0035713.1 mouse_genomes_project X 46945195 46991474 - MGP_129S1SvImJ_P0096109 Usp26 protein_coding protein_coding MGP_129S1SvImJ_T0016420.1 MGP_129S1SvImJ_G0014509.1 mouse_genomes_project X 68385820 68386156 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096326.1 MGP_129S1SvImJ_G0035792.1 mouse_genomes_project X 68072107 68077096 - MGP_129S1SvImJ_P0096326 Magea10 protein_coding protein_coding MGP_129S1SvImJ_T0016662.1 MGP_129S1SvImJ_G0014751.1 mouse_genomes_project X 110941695 110942434 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097352.1 MGP_129S1SvImJ_G0036061.1 mouse_genomes_project X 131235656 131260935 - MGP_129S1SvImJ_P0097352 Nox1 protein_coding protein_coding MGP_129S1SvImJ_T0097353.1 MGP_129S1SvImJ_G0036061.1 mouse_genomes_project X 131236287 131260846 - MGP_129S1SvImJ_P0097353 Nox1 protein_coding protein_coding MGP_129S1SvImJ_T0097354.1 MGP_129S1SvImJ_G0036061.1 mouse_genomes_project X 131236379 131260789 - MGP_129S1SvImJ_P0097354 Nox1 protein_coding protein_coding MGP_129S1SvImJ_T0097355.1 MGP_129S1SvImJ_G0036061.1 mouse_genomes_project X 131256793 131382779 - MGP_129S1SvImJ_P0097355 Nox1 protein_coding protein_coding MGP_129S1SvImJ_T0097356.1 MGP_129S1SvImJ_G0036061.1 mouse_genomes_project X 131256793 131290101 - MGP_129S1SvImJ_P0097356 Nox1 protein_coding protein_coding MGP_129S1SvImJ_T0096360.1 MGP_129S1SvImJ_G0035811.1 mouse_genomes_project X 69233784 69244013 + Bgn protein_coding processed_transcript MGP_129S1SvImJ_T0096361.1 MGP_129S1SvImJ_G0035811.1 mouse_genomes_project X 69233784 69247203 + MGP_129S1SvImJ_P0096361 Bgn protein_coding protein_coding MGP_129S1SvImJ_T0096362.1 MGP_129S1SvImJ_G0035811.1 mouse_genomes_project X 69233805 69243665 + Bgn protein_coding retained_intron MGP_129S1SvImJ_T0096363.1 MGP_129S1SvImJ_G0035811.1 mouse_genomes_project X 69233815 69236481 + Bgn protein_coding retained_intron MGP_129S1SvImJ_T0096364.1 MGP_129S1SvImJ_G0035811.1 mouse_genomes_project X 69233817 69247199 + MGP_129S1SvImJ_P0096364 Bgn protein_coding protein_coding MGP_129S1SvImJ_T0096365.1 MGP_129S1SvImJ_G0035811.1 mouse_genomes_project X 69233821 69243649 + Bgn protein_coding retained_intron MGP_129S1SvImJ_T0096366.1 MGP_129S1SvImJ_G0035811.1 mouse_genomes_project X 69243323 69244577 + Bgn protein_coding processed_transcript MGP_129S1SvImJ_T0096367.1 MGP_129S1SvImJ_G0035811.1 mouse_genomes_project X 69246165 69247196 + Bgn protein_coding processed_transcript MGP_129S1SvImJ_T0016230.1 MGP_129S1SvImJ_G0014319.1 mouse_genomes_project X 8355349 8355885 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096350.1 MGP_129S1SvImJ_G0035805.1 mouse_genomes_project X 69042727 69049991 + MGP_129S1SvImJ_P0096350 protein_coding protein_coding MGP_129S1SvImJ_T0005608.1 MGP_129S1SvImJ_G0004728.1 mouse_genomes_project X 56290663 56295059 + Gm14662 antisense antisense MGP_129S1SvImJ_T0016597.1 MGP_129S1SvImJ_G0014686.1 mouse_genomes_project X 100169128 100169557 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100237.1 MGP_129S1SvImJ_G0038304.1 mouse_genomes_project X 32006009 32006118 - Gm26099 snRNA snRNA MGP_129S1SvImJ_T0096667.1 MGP_129S1SvImJ_G0035853.1 mouse_genomes_project X 70926803 70940670 + MGP_129S1SvImJ_P0096667 Dkc1 protein_coding protein_coding MGP_129S1SvImJ_T0096668.1 MGP_129S1SvImJ_G0035853.1 mouse_genomes_project X 70927002 70933490 + MGP_129S1SvImJ_P0096668 Dkc1 protein_coding protein_coding MGP_129S1SvImJ_T0096669.1 MGP_129S1SvImJ_G0035853.1 mouse_genomes_project X 70927035 70929837 + MGP_129S1SvImJ_P0096669 Dkc1 protein_coding protein_coding MGP_129S1SvImJ_T0096670.1 MGP_129S1SvImJ_G0035853.1 mouse_genomes_project X 70927048 70929747 + Dkc1 protein_coding retained_intron MGP_129S1SvImJ_T0096671.1 MGP_129S1SvImJ_G0035853.1 mouse_genomes_project X 70927050 70929897 + Dkc1 protein_coding processed_transcript MGP_129S1SvImJ_T0096672.1 MGP_129S1SvImJ_G0035853.1 mouse_genomes_project X 70927064 70933412 + MGP_129S1SvImJ_P0096672 Dkc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096673.1 MGP_129S1SvImJ_G0035853.1 mouse_genomes_project X 70927495 70929769 + Dkc1 protein_coding retained_intron MGP_129S1SvImJ_T0096674.1 MGP_129S1SvImJ_G0035853.1 mouse_genomes_project X 70930867 70938103 + Dkc1 protein_coding retained_intron MGP_129S1SvImJ_T0096675.1 MGP_129S1SvImJ_G0035853.1 mouse_genomes_project X 70931002 70939135 + MGP_129S1SvImJ_P0096675 Dkc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096676.1 MGP_129S1SvImJ_G0035853.1 mouse_genomes_project X 70931208 70936610 + Dkc1 protein_coding processed_transcript MGP_129S1SvImJ_T0096677.1 MGP_129S1SvImJ_G0035853.1 mouse_genomes_project X 70931890 70936658 + Dkc1 protein_coding processed_transcript MGP_129S1SvImJ_T0096678.1 MGP_129S1SvImJ_G0035853.1 mouse_genomes_project X 70936840 70939168 + Dkc1 protein_coding retained_intron MGP_129S1SvImJ_T0095948.1 MGP_129S1SvImJ_G0035672.1 mouse_genomes_project X 36431189 36651485 + Gria3 protein_coding retained_intron MGP_129S1SvImJ_T0095949.1 MGP_129S1SvImJ_G0035672.1 mouse_genomes_project X 36431435 36717490 + MGP_129S1SvImJ_P0095949 Gria3 protein_coding protein_coding MGP_129S1SvImJ_T0095950.1 MGP_129S1SvImJ_G0035672.1 mouse_genomes_project X 36431573 36719506 + MGP_129S1SvImJ_P0095950 Gria3 protein_coding protein_coding MGP_129S1SvImJ_T0095951.1 MGP_129S1SvImJ_G0035672.1 mouse_genomes_project X 36431667 36717497 + Gria3 protein_coding retained_intron MGP_129S1SvImJ_T0095952.1 MGP_129S1SvImJ_G0035672.1 mouse_genomes_project X 36431705 36719503 + MGP_129S1SvImJ_P0095952 Gria3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095953.1 MGP_129S1SvImJ_G0035672.1 mouse_genomes_project X 36431751 36651940 + Gria3 protein_coding retained_intron MGP_129S1SvImJ_T0095954.1 MGP_129S1SvImJ_G0035672.1 mouse_genomes_project X 36431834 36713374 + MGP_129S1SvImJ_P0095954 Gria3 protein_coding protein_coding MGP_129S1SvImJ_T0095955.1 MGP_129S1SvImJ_G0035672.1 mouse_genomes_project X 36433009 36515968 + MGP_129S1SvImJ_P0095955 Gria3 protein_coding protein_coding MGP_129S1SvImJ_T0095956.1 MGP_129S1SvImJ_G0035672.1 mouse_genomes_project X 36648582 36659648 + Gria3 protein_coding retained_intron MGP_129S1SvImJ_T0018656.1 MGP_129S1SvImJ_G0015778.1 mouse_genomes_project X 47958752 47960783 - Kis2 processed_transcript processed_transcript MGP_129S1SvImJ_T0018657.1 MGP_129S1SvImJ_G0015778.1 mouse_genomes_project X 47958752 47960783 - Kis2 processed_transcript processed_transcript MGP_129S1SvImJ_T0018658.1 MGP_129S1SvImJ_G0015778.1 mouse_genomes_project X 47958752 47960783 - Kis2 processed_transcript processed_transcript MGP_129S1SvImJ_T0018659.1 MGP_129S1SvImJ_G0015778.1 mouse_genomes_project X 47958754 47961150 - Kis2 processed_transcript processed_transcript MGP_129S1SvImJ_T0096946.1 MGP_129S1SvImJ_G0035938.1 mouse_genomes_project X 96423830 96761522 + Eda protein_coding retained_intron MGP_129S1SvImJ_T0096947.1 MGP_129S1SvImJ_G0035938.1 mouse_genomes_project X 96423830 96850204 + MGP_129S1SvImJ_P0096947 Eda protein_coding protein_coding MGP_129S1SvImJ_T0096948.1 MGP_129S1SvImJ_G0035938.1 mouse_genomes_project X 96423830 96850204 + MGP_129S1SvImJ_P0096948 Eda protein_coding protein_coding MGP_129S1SvImJ_T0096949.1 MGP_129S1SvImJ_G0035938.1 mouse_genomes_project X 96423830 96850203 + MGP_129S1SvImJ_P0096949 Eda protein_coding protein_coding MGP_129S1SvImJ_T0096950.1 MGP_129S1SvImJ_G0035938.1 mouse_genomes_project X 96423830 96850206 + MGP_129S1SvImJ_P0096950 Eda protein_coding protein_coding MGP_129S1SvImJ_T0096951.1 MGP_129S1SvImJ_G0035938.1 mouse_genomes_project X 96423830 96850203 + MGP_129S1SvImJ_P0096951 Eda protein_coding protein_coding MGP_129S1SvImJ_T0096952.1 MGP_129S1SvImJ_G0035938.1 mouse_genomes_project X 96423830 96850204 + MGP_129S1SvImJ_P0096952 Eda protein_coding protein_coding MGP_129S1SvImJ_T0096953.1 MGP_129S1SvImJ_G0035938.1 mouse_genomes_project X 96423830 96850206 + MGP_129S1SvImJ_P0096953 Eda protein_coding protein_coding MGP_129S1SvImJ_T0096954.1 MGP_129S1SvImJ_G0035938.1 mouse_genomes_project X 96424005 96845256 + MGP_129S1SvImJ_P0096954 Eda protein_coding protein_coding MGP_129S1SvImJ_T0096955.1 MGP_129S1SvImJ_G0035938.1 mouse_genomes_project X 96424005 96846600 + MGP_129S1SvImJ_P0096955 Eda protein_coding protein_coding MGP_129S1SvImJ_T0096956.1 MGP_129S1SvImJ_G0035938.1 mouse_genomes_project X 96834902 96843882 + Eda protein_coding processed_transcript MGP_129S1SvImJ_T0096957.1 MGP_129S1SvImJ_G0035938.1 mouse_genomes_project X 96836698 96844480 + Eda protein_coding processed_transcript MGP_129S1SvImJ_T0016369.1 MGP_129S1SvImJ_G0014458.1 mouse_genomes_project X 56895424 56896267 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097217.1 MGP_129S1SvImJ_G0036013.1 mouse_genomes_project X 104089774 104131845 + MGP_129S1SvImJ_P0097217 Gpr174 protein_coding protein_coding MGP_129S1SvImJ_T0097218.1 MGP_129S1SvImJ_G0036013.1 mouse_genomes_project X 104089817 104132440 + MGP_129S1SvImJ_P0097218 Gpr174 protein_coding protein_coding MGP_129S1SvImJ_T0097219.1 MGP_129S1SvImJ_G0036013.1 mouse_genomes_project X 104089874 104130980 + MGP_129S1SvImJ_P0097219 Gpr174 protein_coding protein_coding MGP_129S1SvImJ_T0097220.1 MGP_129S1SvImJ_G0036013.1 mouse_genomes_project X 104090214 104130992 + MGP_129S1SvImJ_P0097220 Gpr174 protein_coding protein_coding MGP_129S1SvImJ_T0097221.1 MGP_129S1SvImJ_G0036013.1 mouse_genomes_project X 104103896 104127995 + Gpr174 protein_coding processed_transcript MGP_129S1SvImJ_T0097222.1 MGP_129S1SvImJ_G0036013.1 mouse_genomes_project X 104120052 104128126 + Gpr174 protein_coding processed_transcript MGP_129S1SvImJ_T0097223.1 MGP_129S1SvImJ_G0036013.1 mouse_genomes_project X 104120052 104132442 + MGP_129S1SvImJ_P0097223 Gpr174 protein_coding protein_coding MGP_129S1SvImJ_T0098072.1 MGP_129S1SvImJ_G0036254.1 mouse_genomes_project X 162355449 162455091 + MGP_129S1SvImJ_P0098072 Pir protein_coding protein_coding MGP_129S1SvImJ_T0098073.1 MGP_129S1SvImJ_G0036254.1 mouse_genomes_project X 162355509 162458995 + MGP_129S1SvImJ_P0098073 Pir protein_coding protein_coding MGP_129S1SvImJ_T0098074.1 MGP_129S1SvImJ_G0036254.1 mouse_genomes_project X 162355589 162357954 + Pir protein_coding retained_intron MGP_129S1SvImJ_T0098075.1 MGP_129S1SvImJ_G0036254.1 mouse_genomes_project X 162355625 162432429 + Pir protein_coding retained_intron MGP_129S1SvImJ_T0098076.1 MGP_129S1SvImJ_G0036254.1 mouse_genomes_project X 162355651 162398656 + Pir protein_coding processed_transcript MGP_129S1SvImJ_T0016579.1 MGP_129S1SvImJ_G0014668.1 mouse_genomes_project X 98761166 98761630 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016702.1 MGP_129S1SvImJ_G0014791.1 mouse_genomes_project X 118685918 118688830 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009387.1 MGP_129S1SvImJ_G0007538.1 mouse_genomes_project X 51596854 51599901 + 1600025M17Rik lincRNA lincRNA MGP_129S1SvImJ_T0009388.1 MGP_129S1SvImJ_G0007538.1 mouse_genomes_project X 51596912 51598761 + 1600025M17Rik lincRNA lincRNA MGP_129S1SvImJ_T0097298.1 MGP_129S1SvImJ_G0036039.1 mouse_genomes_project X 111673914 111676450 + MGP_129S1SvImJ_P0097298 Ube2dnl1 protein_coding protein_coding MGP_129S1SvImJ_T0016486.1 MGP_129S1SvImJ_G0014575.1 mouse_genomes_project X 83861136 83862014 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018643.1 MGP_129S1SvImJ_G0015774.1 mouse_genomes_project X 14027391 14037566 - Gm14636 processed_transcript processed_transcript MGP_129S1SvImJ_T0018644.1 MGP_129S1SvImJ_G0015774.1 mouse_genomes_project X 14032385 14037575 - Gm14636 processed_transcript processed_transcript MGP_129S1SvImJ_T0016880.1 MGP_129S1SvImJ_G0014969.1 mouse_genomes_project X 156213714 156214291 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098089.1 MGP_129S1SvImJ_G0036259.1 mouse_genomes_project X 163053123 163097192 - MGP_129S1SvImJ_P0098089 Mospd2 protein_coding protein_coding MGP_129S1SvImJ_T0098090.1 MGP_129S1SvImJ_G0036259.1 mouse_genomes_project X 163053272 163097114 - MGP_129S1SvImJ_P0098090 Mospd2 protein_coding protein_coding MGP_129S1SvImJ_T0098091.1 MGP_129S1SvImJ_G0036259.1 mouse_genomes_project X 163055163 163097152 - MGP_129S1SvImJ_P0098091 Mospd2 protein_coding protein_coding MGP_129S1SvImJ_T0098092.1 MGP_129S1SvImJ_G0036259.1 mouse_genomes_project X 163071113 163097145 - Mospd2 protein_coding retained_intron MGP_129S1SvImJ_T0098093.1 MGP_129S1SvImJ_G0036259.1 mouse_genomes_project X 163071118 163097145 - Mospd2 protein_coding retained_intron MGP_129S1SvImJ_T0098094.1 MGP_129S1SvImJ_G0036259.1 mouse_genomes_project X 163076197 163097142 - Mospd2 protein_coding retained_intron MGP_129S1SvImJ_T0098095.1 MGP_129S1SvImJ_G0036259.1 mouse_genomes_project X 163079966 163097144 - Mospd2 protein_coding retained_intron MGP_129S1SvImJ_T0098096.1 MGP_129S1SvImJ_G0036259.1 mouse_genomes_project X 163080292 163097160 - Mospd2 protein_coding processed_transcript MGP_129S1SvImJ_T0098097.1 MGP_129S1SvImJ_G0036259.1 mouse_genomes_project X 163096477 163097139 - Mospd2 protein_coding retained_intron MGP_129S1SvImJ_T0009393.1 MGP_129S1SvImJ_G0007542.1 mouse_genomes_project X 64263703 64274907 - Fmr1os lincRNA lincRNA MGP_129S1SvImJ_T0097178.1 MGP_129S1SvImJ_G0036000.1 mouse_genomes_project X 102749880 102794154 - MGP_129S1SvImJ_P0097178 Magt1 protein_coding protein_coding MGP_129S1SvImJ_T0097179.1 MGP_129S1SvImJ_G0036000.1 mouse_genomes_project X 102749880 102794161 - MGP_129S1SvImJ_P0097179 Magt1 protein_coding protein_coding MGP_129S1SvImJ_T0097180.1 MGP_129S1SvImJ_G0036000.1 mouse_genomes_project X 102752087 102794041 - MGP_129S1SvImJ_P0097180 Magt1 protein_coding protein_coding MGP_129S1SvImJ_T0097181.1 MGP_129S1SvImJ_G0036000.1 mouse_genomes_project X 102758144 102794035 - MGP_129S1SvImJ_P0097181 Magt1 protein_coding protein_coding MGP_129S1SvImJ_T0016265.1 MGP_129S1SvImJ_G0014354.1 mouse_genomes_project X 17342552 17343036 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097099.1 MGP_129S1SvImJ_G0035973.1 mouse_genomes_project X 98874231 99104261 - MGP_129S1SvImJ_P0097099 Hdac8 protein_coding protein_coding MGP_129S1SvImJ_T0097100.1 MGP_129S1SvImJ_G0035973.1 mouse_genomes_project X 99001656 99103983 - MGP_129S1SvImJ_P0097100 Hdac8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097101.1 MGP_129S1SvImJ_G0035973.1 mouse_genomes_project X 99003611 99104048 - Hdac8 protein_coding processed_transcript MGP_129S1SvImJ_T0097102.1 MGP_129S1SvImJ_G0035973.1 mouse_genomes_project X 99010334 99104247 - Hdac8 protein_coding processed_transcript MGP_129S1SvImJ_T0097103.1 MGP_129S1SvImJ_G0035973.1 mouse_genomes_project X 99097067 99103643 - Hdac8 protein_coding retained_intron MGP_129S1SvImJ_T0095885.1 MGP_129S1SvImJ_G0035635.1 mouse_genomes_project X 32141635 32142858 + MGP_129S1SvImJ_P0095885 Rnf113a1 protein_coding protein_coding MGP_129S1SvImJ_T0016453.1 MGP_129S1SvImJ_G0014542.1 mouse_genomes_project X 74287371 74288437 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096314.1 MGP_129S1SvImJ_G0035787.1 mouse_genomes_project X 67642021 67646049 + MGP_129S1SvImJ_P0096314 Prrg3 protein_coding protein_coding MGP_129S1SvImJ_T0096315.1 MGP_129S1SvImJ_G0035787.1 mouse_genomes_project X 67642022 67649494 + MGP_129S1SvImJ_P0096315 Prrg3 protein_coding protein_coding MGP_129S1SvImJ_T0096316.1 MGP_129S1SvImJ_G0035787.1 mouse_genomes_project X 67642379 67652112 + MGP_129S1SvImJ_P0096316 Prrg3 protein_coding protein_coding MGP_129S1SvImJ_T0016564.1 MGP_129S1SvImJ_G0014653.1 mouse_genomes_project X 96777572 96778710 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018703.1 MGP_129S1SvImJ_G0015791.1 mouse_genomes_project X 131872408 131874309 - B230119M05Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0098079.1 MGP_129S1SvImJ_G0036256.1 mouse_genomes_project X 162517480 162531600 + MGP_129S1SvImJ_P0098079 Piga protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0098080.1 MGP_129S1SvImJ_G0036256.1 mouse_genomes_project X 162517480 162531595 + MGP_129S1SvImJ_P0098080 Piga protein_coding protein_coding MGP_129S1SvImJ_T0098081.1 MGP_129S1SvImJ_G0036256.1 mouse_genomes_project X 162517505 162531593 + MGP_129S1SvImJ_P0098081 Piga protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0098082.1 MGP_129S1SvImJ_G0036256.1 mouse_genomes_project X 162517596 162531597 + MGP_129S1SvImJ_P0098082 Piga protein_coding protein_coding MGP_129S1SvImJ_T0098083.1 MGP_129S1SvImJ_G0036256.1 mouse_genomes_project X 162520273 162529662 + MGP_129S1SvImJ_P0098083 Piga protein_coding protein_coding MGP_129S1SvImJ_T0098084.1 MGP_129S1SvImJ_G0036256.1 mouse_genomes_project X 162523203 162529749 + Piga protein_coding retained_intron MGP_129S1SvImJ_T0016785.1 MGP_129S1SvImJ_G0014874.1 mouse_genomes_project X 139361350 139362323 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016209.1 MGP_129S1SvImJ_G0014298.1 mouse_genomes_project X 5432199 5432665 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101543.1 MGP_129S1SvImJ_G0039610.1 mouse_genomes_project X 132563878 132563992 - Gm22006 snoRNA snoRNA MGP_129S1SvImJ_T0011790.1 MGP_129S1SvImJ_G0009906.1 mouse_genomes_project X 105969172 105969464 - Gm26415 misc_RNA misc_RNA MGP_129S1SvImJ_T0016635.1 MGP_129S1SvImJ_G0014724.1 mouse_genomes_project X 105280482 105283371 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097689.1 MGP_129S1SvImJ_G0036164.1 mouse_genomes_project X 144994915 145041946 - MGP_129S1SvImJ_P0097689 Il13ra2 protein_coding protein_coding MGP_129S1SvImJ_T0097690.1 MGP_129S1SvImJ_G0036164.1 mouse_genomes_project X 144994917 145015675 - MGP_129S1SvImJ_P0097690 Il13ra2 protein_coding protein_coding MGP_129S1SvImJ_T0016852.1 MGP_129S1SvImJ_G0014941.1 mouse_genomes_project X 152064710 152065309 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011194.1 MGP_129S1SvImJ_G0009310.1 mouse_genomes_project X 62433001 62433075 - Mir465 miRNA miRNA MGP_129S1SvImJ_T0011204.1 MGP_129S1SvImJ_G0009320.1 mouse_genomes_project X 69808762 69808833 - Mir5132 miRNA miRNA MGP_129S1SvImJ_T0016323.1 MGP_129S1SvImJ_G0014412.1 mouse_genomes_project X 44337889 44338238 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098680.1 MGP_129S1SvImJ_G0036765.1 mouse_genomes_project X 45036427 45036515 + n-R5s6 rRNA rRNA MGP_129S1SvImJ_T0097440.1 MGP_129S1SvImJ_G0036088.1 mouse_genomes_project X 133062822 133070246 - MGP_129S1SvImJ_P0097440 protein_coding protein_coding MGP_129S1SvImJ_T0097441.1 MGP_129S1SvImJ_G0036088.1 mouse_genomes_project X 133062822 133064815 - MGP_129S1SvImJ_P0097441 protein_coding protein_coding MGP_129S1SvImJ_T0096477.1 MGP_129S1SvImJ_G0035828.1 mouse_genomes_project X 69726866 69750436 - MGP_129S1SvImJ_P0096477 Hcfc1 protein_coding protein_coding MGP_129S1SvImJ_T0096478.1 MGP_129S1SvImJ_G0035828.1 mouse_genomes_project X 69726869 69733330 - MGP_129S1SvImJ_P0096478 Hcfc1 protein_coding protein_coding MGP_129S1SvImJ_T0096479.1 MGP_129S1SvImJ_G0035828.1 mouse_genomes_project X 69726871 69750430 - MGP_129S1SvImJ_P0096479 Hcfc1 protein_coding protein_coding MGP_129S1SvImJ_T0096480.1 MGP_129S1SvImJ_G0035828.1 mouse_genomes_project X 69729395 69731507 - Hcfc1 protein_coding retained_intron MGP_129S1SvImJ_T0096481.1 MGP_129S1SvImJ_G0035828.1 mouse_genomes_project X 69731269 69732421 - Hcfc1 protein_coding processed_transcript MGP_129S1SvImJ_T0096482.1 MGP_129S1SvImJ_G0035828.1 mouse_genomes_project X 69739195 69741504 - Hcfc1 protein_coding processed_transcript MGP_129S1SvImJ_T0097282.1 MGP_129S1SvImJ_G0036035.1 mouse_genomes_project X 109396236 109459834 - MGP_129S1SvImJ_P0097282 Pof1b protein_coding protein_coding MGP_129S1SvImJ_T0016780.1 MGP_129S1SvImJ_G0014869.1 mouse_genomes_project X 138833079 138833861 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096878.1 MGP_129S1SvImJ_G0035919.1 mouse_genomes_project X 91977987 91996696 - MGP_129S1SvImJ_P0096878 Zc4h2 protein_coding protein_coding MGP_129S1SvImJ_T0096879.1 MGP_129S1SvImJ_G0035919.1 mouse_genomes_project X 91977990 91996671 - MGP_129S1SvImJ_P0096879 Zc4h2 protein_coding protein_coding MGP_129S1SvImJ_T0096880.1 MGP_129S1SvImJ_G0035919.1 mouse_genomes_project X 91977993 91996797 - MGP_129S1SvImJ_P0096880 Zc4h2 protein_coding protein_coding MGP_129S1SvImJ_T0097676.1 MGP_129S1SvImJ_G0036160.1 mouse_genomes_project X 142249391 142680309 + MGP_129S1SvImJ_P0097676 Zcchc16 protein_coding protein_coding MGP_129S1SvImJ_T0097677.1 MGP_129S1SvImJ_G0036160.1 mouse_genomes_project X 142677398 142679156 + MGP_129S1SvImJ_P0097677 Zcchc16 protein_coding protein_coding MGP_129S1SvImJ_T0098121.1 MGP_129S1SvImJ_G0036265.1 mouse_genomes_project X 164521200 164565704 - MGP_129S1SvImJ_P0098121 Ofd1 protein_coding protein_coding MGP_129S1SvImJ_T0096679.1 MGP_129S1SvImJ_G0035854.1 mouse_genomes_project X 70940625 70961858 - MGP_129S1SvImJ_P0096679 Mpp1 protein_coding protein_coding MGP_129S1SvImJ_T0096680.1 MGP_129S1SvImJ_G0035854.1 mouse_genomes_project X 70941540 70961686 - MGP_129S1SvImJ_P0096680 Mpp1 protein_coding protein_coding MGP_129S1SvImJ_T0096681.1 MGP_129S1SvImJ_G0035854.1 mouse_genomes_project X 70942608 70961791 - MGP_129S1SvImJ_P0096681 Mpp1 protein_coding protein_coding MGP_129S1SvImJ_T0096682.1 MGP_129S1SvImJ_G0035854.1 mouse_genomes_project X 70943245 70961696 - MGP_129S1SvImJ_P0096682 Mpp1 protein_coding protein_coding MGP_129S1SvImJ_T0096683.1 MGP_129S1SvImJ_G0035854.1 mouse_genomes_project X 70944457 70961696 - Mpp1 protein_coding processed_transcript MGP_129S1SvImJ_T0096684.1 MGP_129S1SvImJ_G0035854.1 mouse_genomes_project X 70946727 70948740 - Mpp1 protein_coding retained_intron MGP_129S1SvImJ_T0096685.1 MGP_129S1SvImJ_G0035854.1 mouse_genomes_project X 70946953 70961696 - MGP_129S1SvImJ_P0096685 Mpp1 protein_coding protein_coding MGP_129S1SvImJ_T0096686.1 MGP_129S1SvImJ_G0035854.1 mouse_genomes_project X 70952363 70961696 - MGP_129S1SvImJ_P0096686 Mpp1 protein_coding protein_coding MGP_129S1SvImJ_T0096687.1 MGP_129S1SvImJ_G0035854.1 mouse_genomes_project X 70953851 70961828 - Mpp1 protein_coding retained_intron MGP_129S1SvImJ_T0096688.1 MGP_129S1SvImJ_G0035854.1 mouse_genomes_project X 70956674 70961795 - MGP_129S1SvImJ_P0096688 Mpp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096605.1 MGP_129S1SvImJ_G0035842.1 mouse_genomes_project X 70131615 70134793 + Plxna3 protein_coding processed_transcript MGP_129S1SvImJ_T0096606.1 MGP_129S1SvImJ_G0035842.1 mouse_genomes_project X 70131615 70147236 + MGP_129S1SvImJ_P0096606 Plxna3 protein_coding protein_coding MGP_129S1SvImJ_T0096607.1 MGP_129S1SvImJ_G0035842.1 mouse_genomes_project X 70135006 70147230 + Plxna3 protein_coding retained_intron MGP_129S1SvImJ_T0096608.1 MGP_129S1SvImJ_G0035842.1 mouse_genomes_project X 70136295 70137253 + Plxna3 protein_coding retained_intron MGP_129S1SvImJ_T0096609.1 MGP_129S1SvImJ_G0035842.1 mouse_genomes_project X 70136875 70138386 + Plxna3 protein_coding retained_intron MGP_129S1SvImJ_T0096610.1 MGP_129S1SvImJ_G0035842.1 mouse_genomes_project X 70137781 70138883 + Plxna3 protein_coding retained_intron MGP_129S1SvImJ_T0096611.1 MGP_129S1SvImJ_G0035842.1 mouse_genomes_project X 70140812 70141863 + Plxna3 protein_coding retained_intron MGP_129S1SvImJ_T0096612.1 MGP_129S1SvImJ_G0035842.1 mouse_genomes_project X 70140895 70141706 + Plxna3 protein_coding retained_intron MGP_129S1SvImJ_T0096613.1 MGP_129S1SvImJ_G0035842.1 mouse_genomes_project X 70144133 70146492 + Plxna3 protein_coding retained_intron MGP_129S1SvImJ_T0096964.1 MGP_129S1SvImJ_G0035943.1 mouse_genomes_project X 97029768 97035723 + MGP_129S1SvImJ_P0096964 Awat1 protein_coding protein_coding MGP_129S1SvImJ_T0096389.1 MGP_129S1SvImJ_G0035817.1 mouse_genomes_project X 69491071 69512942 + MGP_129S1SvImJ_P0096389 Abcd1 protein_coding protein_coding MGP_129S1SvImJ_T0096390.1 MGP_129S1SvImJ_G0035817.1 mouse_genomes_project X 69491214 69505916 + MGP_129S1SvImJ_P0096390 Abcd1 protein_coding protein_coding MGP_129S1SvImJ_T0097810.1 MGP_129S1SvImJ_G0036180.1 mouse_genomes_project X 149753660 149759670 + MGP_129S1SvImJ_P0097810 Hsd17b10 protein_coding protein_coding MGP_129S1SvImJ_T0097811.1 MGP_129S1SvImJ_G0036180.1 mouse_genomes_project X 149753660 149759670 + MGP_129S1SvImJ_P0097811 Hsd17b10 protein_coding protein_coding MGP_129S1SvImJ_T0097812.1 MGP_129S1SvImJ_G0036180.1 mouse_genomes_project X 149753964 149759670 + Hsd17b10 protein_coding processed_transcript MGP_129S1SvImJ_T0097813.1 MGP_129S1SvImJ_G0036180.1 mouse_genomes_project X 149758624 149759670 + Hsd17b10 protein_coding retained_intron MGP_129S1SvImJ_T0016547.1 MGP_129S1SvImJ_G0014636.1 mouse_genomes_project X 92605107 92606527 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102843.1 MGP_129S1SvImJ_G0040675.1 mouse_genomes_project X 8044226 8044364 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0097636.1 MGP_129S1SvImJ_G0036153.1 mouse_genomes_project X 140634654 140639354 + MGP_129S1SvImJ_P0097636 Rgag1 protein_coding protein_coding MGP_129S1SvImJ_T0016389.1 MGP_129S1SvImJ_G0014478.1 mouse_genomes_project X 60631767 60632104 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016259.1 MGP_129S1SvImJ_G0014348.1 mouse_genomes_project X 16419959 16421348 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097211.1 MGP_129S1SvImJ_G0036012.1 mouse_genomes_project X 103981179 104008144 + MGP_129S1SvImJ_P0097211 A630033H20Rik protein_coding protein_coding MGP_129S1SvImJ_T0097212.1 MGP_129S1SvImJ_G0036012.1 mouse_genomes_project X 103981179 104005884 + MGP_129S1SvImJ_P0097212 A630033H20Rik protein_coding protein_coding MGP_129S1SvImJ_T0097213.1 MGP_129S1SvImJ_G0036012.1 mouse_genomes_project X 103981706 104005910 + MGP_129S1SvImJ_P0097213 A630033H20Rik protein_coding protein_coding MGP_129S1SvImJ_T0097214.1 MGP_129S1SvImJ_G0036012.1 mouse_genomes_project X 103981706 104008144 + MGP_129S1SvImJ_P0097214 A630033H20Rik protein_coding protein_coding MGP_129S1SvImJ_T0097215.1 MGP_129S1SvImJ_G0036012.1 mouse_genomes_project X 103981850 104005630 + MGP_129S1SvImJ_P0097215 A630033H20Rik protein_coding protein_coding MGP_129S1SvImJ_T0097216.1 MGP_129S1SvImJ_G0036012.1 mouse_genomes_project X 103981867 104008140 + MGP_129S1SvImJ_P0097216 A630033H20Rik protein_coding protein_coding MGP_129S1SvImJ_T0016791.1 MGP_129S1SvImJ_G0014880.1 mouse_genomes_project X 139526094 139526352 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096351.1 MGP_129S1SvImJ_G0035806.1 mouse_genomes_project X 69042727 69049991 + MGP_129S1SvImJ_P0096351 protein_coding protein_coding MGP_129S1SvImJ_T0009382.1 MGP_129S1SvImJ_G0007535.1 mouse_genomes_project X 41593310 41896851 - lincRNA lincRNA MGP_129S1SvImJ_T0016845.1 MGP_129S1SvImJ_G0014934.1 mouse_genomes_project X 150711220 150712829 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101506.1 MGP_129S1SvImJ_G0039573.1 mouse_genomes_project X 2157596 2157729 - Gm23082 snoRNA snoRNA MGP_129S1SvImJ_T0016382.1 MGP_129S1SvImJ_G0014471.1 mouse_genomes_project X 58667109 58668950 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100242.1 MGP_129S1SvImJ_G0038309.1 mouse_genomes_project X 43449604 43449708 + Gm22528 snRNA snRNA MGP_129S1SvImJ_T0097900.1 MGP_129S1SvImJ_G0036215.1 mouse_genomes_project X 153532712 153746979 + Gm15155 protein_coding processed_transcript MGP_129S1SvImJ_T0097901.1 MGP_129S1SvImJ_G0036215.1 mouse_genomes_project X 153532746 154245124 + MGP_129S1SvImJ_P0097901 Gm15155 protein_coding protein_coding MGP_129S1SvImJ_T0016444.1 MGP_129S1SvImJ_G0014533.1 mouse_genomes_project X 72823045 72823484 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096317.1 MGP_129S1SvImJ_G0035788.1 mouse_genomes_project X 67652375 67671254 + MGP_129S1SvImJ_P0096317 Fate1 protein_coding protein_coding MGP_129S1SvImJ_T0096318.1 MGP_129S1SvImJ_G0035788.1 mouse_genomes_project X 67663787 67671254 + MGP_129S1SvImJ_P0096318 Fate1 protein_coding protein_coding MGP_129S1SvImJ_T0096319.1 MGP_129S1SvImJ_G0035788.1 mouse_genomes_project X 67665416 67670976 + Fate1 protein_coding processed_transcript MGP_129S1SvImJ_T0016432.1 MGP_129S1SvImJ_G0014521.1 mouse_genomes_project X 70682566 70684788 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016741.1 MGP_129S1SvImJ_G0014830.1 mouse_genomes_project X 132026493 132027356 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016633.1 MGP_129S1SvImJ_G0014722.1 mouse_genomes_project X 104245039 104245354 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101511.1 MGP_129S1SvImJ_G0039578.1 mouse_genomes_project X 47037620 47037737 + Gm22539 snoRNA snoRNA MGP_129S1SvImJ_T0098067.1 MGP_129S1SvImJ_G0036252.1 mouse_genomes_project X 162218964 162269810 + MGP_129S1SvImJ_P0098067 Ace2 protein_coding protein_coding MGP_129S1SvImJ_T0098068.1 MGP_129S1SvImJ_G0036252.1 mouse_genomes_project X 162220110 162269810 + MGP_129S1SvImJ_P0098068 Ace2 protein_coding protein_coding MGP_129S1SvImJ_T0098069.1 MGP_129S1SvImJ_G0036252.1 mouse_genomes_project X 162241795 162267214 + MGP_129S1SvImJ_P0098069 Ace2 protein_coding protein_coding MGP_129S1SvImJ_T0096216.1 MGP_129S1SvImJ_G0035755.1 mouse_genomes_project X 55352995 55384199 + MGP_129S1SvImJ_P0096216 F9 protein_coding protein_coding MGP_129S1SvImJ_T0016500.1 MGP_129S1SvImJ_G0014589.1 mouse_genomes_project X 85342337 85343817 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102874.1 MGP_129S1SvImJ_G0040706.1 mouse_genomes_project X 132515428 132518790 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0095817.1 MGP_129S1SvImJ_G0035610.1 mouse_genomes_project X 16663413 16665071 - MGP_129S1SvImJ_P0095817 Gm28269 protein_coding protein_coding MGP_129S1SvImJ_T0096456.1 MGP_129S1SvImJ_G0035826.1 mouse_genomes_project X 69698438 69701428 - Naa10 protein_coding processed_transcript MGP_129S1SvImJ_T0096457.1 MGP_129S1SvImJ_G0035826.1 mouse_genomes_project X 69698438 69704113 - MGP_129S1SvImJ_P0096457 Naa10 protein_coding protein_coding MGP_129S1SvImJ_T0096458.1 MGP_129S1SvImJ_G0035826.1 mouse_genomes_project X 69698461 69704053 - MGP_129S1SvImJ_P0096458 Naa10 protein_coding protein_coding MGP_129S1SvImJ_T0096459.1 MGP_129S1SvImJ_G0035826.1 mouse_genomes_project X 69698485 69704001 - MGP_129S1SvImJ_P0096459 Naa10 protein_coding protein_coding MGP_129S1SvImJ_T0096460.1 MGP_129S1SvImJ_G0035826.1 mouse_genomes_project X 69698645 69703945 - MGP_129S1SvImJ_P0096460 Naa10 protein_coding protein_coding MGP_129S1SvImJ_T0096461.1 MGP_129S1SvImJ_G0035826.1 mouse_genomes_project X 69698657 69701473 - Naa10 protein_coding processed_transcript MGP_129S1SvImJ_T0096462.1 MGP_129S1SvImJ_G0035826.1 mouse_genomes_project X 69699039 69703997 - MGP_129S1SvImJ_P0096462 Naa10 protein_coding protein_coding MGP_129S1SvImJ_T0096463.1 MGP_129S1SvImJ_G0035826.1 mouse_genomes_project X 69699426 69702031 - Naa10 protein_coding retained_intron MGP_129S1SvImJ_T0096464.1 MGP_129S1SvImJ_G0035826.1 mouse_genomes_project X 69699634 69704075 - Naa10 protein_coding retained_intron MGP_129S1SvImJ_T0096465.1 MGP_129S1SvImJ_G0035826.1 mouse_genomes_project X 69703145 69704024 - Naa10 protein_coding retained_intron MGP_129S1SvImJ_T0096466.1 MGP_129S1SvImJ_G0035826.1 mouse_genomes_project X 69703281 69704021 - Naa10 protein_coding retained_intron MGP_129S1SvImJ_T0016757.1 MGP_129S1SvImJ_G0014846.1 mouse_genomes_project X 134523738 134524572 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095944.1 MGP_129S1SvImJ_G0035669.1 mouse_genomes_project X 33767773 33958515 + MGP_129S1SvImJ_P0095944 6030498E09Rik protein_coding protein_coding MGP_129S1SvImJ_T0095945.1 MGP_129S1SvImJ_G0035669.1 mouse_genomes_project X 33953912 33955384 + MGP_129S1SvImJ_P0095945 6030498E09Rik protein_coding protein_coding MGP_129S1SvImJ_T0016378.1 MGP_129S1SvImJ_G0014467.1 mouse_genomes_project X 57777240 57777962 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101550.1 MGP_129S1SvImJ_G0039617.1 mouse_genomes_project X 145100071 145100200 - Gm25107 snoRNA snoRNA MGP_129S1SvImJ_T0016518.1 MGP_129S1SvImJ_G0014607.1 mouse_genomes_project X 88346238 88346901 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016628.1 MGP_129S1SvImJ_G0014717.1 mouse_genomes_project X 104009090 104009975 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016290.1 MGP_129S1SvImJ_G0014379.1 mouse_genomes_project X 35147749 35148298 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016690.1 MGP_129S1SvImJ_G0014779.1 mouse_genomes_project X 116828116 116829406 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096795.1 MGP_129S1SvImJ_G0035891.1 mouse_genomes_project X 82133656 82136769 + MGP_129S1SvImJ_P0096795 Samt3 protein_coding protein_coding MGP_129S1SvImJ_T0096200.1 MGP_129S1SvImJ_G0035751.1 mouse_genomes_project X 53367806 53376549 + MGP_129S1SvImJ_P0096200 Zic3 protein_coding protein_coding MGP_129S1SvImJ_T0096201.1 MGP_129S1SvImJ_G0035751.1 mouse_genomes_project X 53375746 53381663 + MGP_129S1SvImJ_P0096201 Zic3 protein_coding protein_coding MGP_129S1SvImJ_T0096202.1 MGP_129S1SvImJ_G0035751.1 mouse_genomes_project X 53376099 53381663 + MGP_129S1SvImJ_P0096202 Zic3 protein_coding protein_coding MGP_129S1SvImJ_T0096203.1 MGP_129S1SvImJ_G0035751.1 mouse_genomes_project X 53376110 53386827 + MGP_129S1SvImJ_P0096203 Zic3 protein_coding protein_coding MGP_129S1SvImJ_T0016685.1 MGP_129S1SvImJ_G0014774.1 mouse_genomes_project X 114737990 114738194 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096766.1 MGP_129S1SvImJ_G0035885.1 mouse_genomes_project X 78872832 79461101 + Dmd protein_coding retained_intron MGP_129S1SvImJ_T0096767.1 MGP_129S1SvImJ_G0035885.1 mouse_genomes_project X 78872865 81267558 + MGP_129S1SvImJ_P0096767 Dmd protein_coding protein_coding MGP_129S1SvImJ_T0096768.1 MGP_129S1SvImJ_G0035885.1 mouse_genomes_project X 78976565 79728843 + Dmd protein_coding retained_intron MGP_129S1SvImJ_T0096770.1 MGP_129S1SvImJ_G0035885.1 mouse_genomes_project X 79865397 79899835 + Dmd protein_coding processed_transcript MGP_129S1SvImJ_T0096771.1 MGP_129S1SvImJ_G0035885.1 mouse_genomes_project X 79941534 79942536 + Dmd protein_coding processed_transcript MGP_129S1SvImJ_T0096772.1 MGP_129S1SvImJ_G0035885.1 mouse_genomes_project X 80112398 80340804 + Dmd protein_coding processed_transcript MGP_129S1SvImJ_T0096773.1 MGP_129S1SvImJ_G0035885.1 mouse_genomes_project X 80629363 81203465 + Dmd protein_coding retained_intron MGP_129S1SvImJ_T0096774.1 MGP_129S1SvImJ_G0035885.1 mouse_genomes_project X 80813937 81028164 + Dmd protein_coding retained_intron MGP_129S1SvImJ_T0096775.1 MGP_129S1SvImJ_G0035885.1 mouse_genomes_project X 81105909 81113173 + Dmd protein_coding retained_intron MGP_129S1SvImJ_T0096776.1 MGP_129S1SvImJ_G0035885.1 mouse_genomes_project X 81105933 81198693 + Dmd protein_coding retained_intron MGP_129S1SvImJ_T0096777.1 MGP_129S1SvImJ_G0035885.1 mouse_genomes_project X 81105936 81203463 + Dmd protein_coding retained_intron MGP_129S1SvImJ_T0096778.1 MGP_129S1SvImJ_G0035885.1 mouse_genomes_project X 81106027 81266456 + MGP_129S1SvImJ_P0096778 Dmd protein_coding protein_coding MGP_129S1SvImJ_T0096779.1 MGP_129S1SvImJ_G0035885.1 mouse_genomes_project X 81106027 81263915 + MGP_129S1SvImJ_P0096779 Dmd protein_coding protein_coding MGP_129S1SvImJ_T0096780.1 MGP_129S1SvImJ_G0035885.1 mouse_genomes_project X 81239354 81264254 + Dmd protein_coding processed_transcript MGP_129S1SvImJ_T0011164.1 MGP_129S1SvImJ_G0009280.1 mouse_genomes_project X 47958520 47958603 - Mir18b miRNA miRNA MGP_129S1SvImJ_T0011230.1 MGP_129S1SvImJ_G0009346.1 mouse_genomes_project X 133091987 133092041 + Mir7646 miRNA miRNA MGP_129S1SvImJ_T0097359.1 MGP_129S1SvImJ_G0036063.1 mouse_genomes_project X 131347393 131367220 + MGP_129S1SvImJ_P0097359 Arl13a protein_coding protein_coding MGP_129S1SvImJ_T0016219.1 MGP_129S1SvImJ_G0014308.1 mouse_genomes_project X 6985554 6985904 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095938.1 MGP_129S1SvImJ_G0035667.1 mouse_genomes_project X 33572408 33586853 + Mcts1 protein_coding processed_transcript MGP_129S1SvImJ_T0095939.1 MGP_129S1SvImJ_G0035667.1 mouse_genomes_project X 33572485 33588448 + MGP_129S1SvImJ_P0095939 Mcts1 protein_coding protein_coding MGP_129S1SvImJ_T0095940.1 MGP_129S1SvImJ_G0035667.1 mouse_genomes_project X 33573129 33581319 + Mcts1 protein_coding processed_transcript MGP_129S1SvImJ_T0095941.1 MGP_129S1SvImJ_G0035667.1 mouse_genomes_project X 33583741 33588448 + Mcts1 protein_coding processed_transcript MGP_129S1SvImJ_T0095942.1 MGP_129S1SvImJ_G0035667.1 mouse_genomes_project X 33584821 33588422 + Mcts1 protein_coding processed_transcript MGP_129S1SvImJ_T0101794.1 MGP_129S1SvImJ_G0039763.1 mouse_genomes_project X 16280291 16284081 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101795.1 MGP_129S1SvImJ_G0039763.1 mouse_genomes_project X 16280366 16282449 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0100276.1 MGP_129S1SvImJ_G0038343.1 mouse_genomes_project X 113140163 113140327 + Gm24624 snRNA snRNA MGP_129S1SvImJ_T0100223.1 MGP_129S1SvImJ_G0038290.1 mouse_genomes_project X 4246564 4246722 - Gm25728 snRNA snRNA MGP_129S1SvImJ_T0097852.1 MGP_129S1SvImJ_G0036190.1 mouse_genomes_project X 150805141 150808091 + MGP_129S1SvImJ_P0097852 Usp51 protein_coding protein_coding MGP_129S1SvImJ_T0095909.1 MGP_129S1SvImJ_G0035655.1 mouse_genomes_project X 32831970 32834831 - MGP_129S1SvImJ_P0095909 protein_coding protein_coding MGP_129S1SvImJ_T0097449.1 MGP_129S1SvImJ_G0036091.1 mouse_genomes_project X 133241015 133246263 + MGP_129S1SvImJ_P0097449 Bhlhb9 protein_coding protein_coding MGP_129S1SvImJ_T0097450.1 MGP_129S1SvImJ_G0036091.1 mouse_genomes_project X 133241017 133244511 + MGP_129S1SvImJ_P0097450 Bhlhb9 protein_coding protein_coding MGP_129S1SvImJ_T0097451.1 MGP_129S1SvImJ_G0036091.1 mouse_genomes_project X 133241017 133246266 + MGP_129S1SvImJ_P0097451 Bhlhb9 protein_coding protein_coding MGP_129S1SvImJ_T0097452.1 MGP_129S1SvImJ_G0036091.1 mouse_genomes_project X 133241147 133242655 + Bhlhb9 protein_coding retained_intron MGP_129S1SvImJ_T0016759.1 MGP_129S1SvImJ_G0014848.1 mouse_genomes_project X 134528339 134531419 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096848.1 MGP_129S1SvImJ_G0035911.1 mouse_genomes_project X 90778236 90830041 + MGP_129S1SvImJ_P0096848 Apoo protein_coding protein_coding MGP_129S1SvImJ_T0096849.1 MGP_129S1SvImJ_G0035911.1 mouse_genomes_project X 90778236 90827142 + MGP_129S1SvImJ_P0096849 Apoo protein_coding protein_coding MGP_129S1SvImJ_T0016586.1 MGP_129S1SvImJ_G0014675.1 mouse_genomes_project X 99634957 99635470 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016721.1 MGP_129S1SvImJ_G0014810.1 mouse_genomes_project X 127608858 127609534 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097382.1 MGP_129S1SvImJ_G0036071.1 mouse_genomes_project X 131724355 131767427 - MGP_129S1SvImJ_P0097382 Btk protein_coding protein_coding MGP_129S1SvImJ_T0097383.1 MGP_129S1SvImJ_G0036071.1 mouse_genomes_project X 131724389 131767415 - MGP_129S1SvImJ_P0097383 Btk protein_coding protein_coding MGP_129S1SvImJ_T0097384.1 MGP_129S1SvImJ_G0036071.1 mouse_genomes_project X 131732396 131767427 - Btk protein_coding retained_intron MGP_129S1SvImJ_T0097385.1 MGP_129S1SvImJ_G0036071.1 mouse_genomes_project X 131753272 131766760 - Btk protein_coding processed_transcript MGP_129S1SvImJ_T0097386.1 MGP_129S1SvImJ_G0036071.1 mouse_genomes_project X 131757554 131767856 - Btk protein_coding processed_transcript MGP_129S1SvImJ_T0016241.1 MGP_129S1SvImJ_G0014330.1 mouse_genomes_project X 12130275 12132608 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096762.1 MGP_129S1SvImJ_G0035883.1 mouse_genomes_project X 76989822 77014189 + Tmem47 protein_coding processed_transcript MGP_129S1SvImJ_T0096763.1 MGP_129S1SvImJ_G0035883.1 mouse_genomes_project X 76989829 77015144 + MGP_129S1SvImJ_P0096763 Tmem47 protein_coding protein_coding MGP_129S1SvImJ_T0096764.1 MGP_129S1SvImJ_G0035883.1 mouse_genomes_project X 76989840 77017285 + MGP_129S1SvImJ_P0096764 Tmem47 protein_coding protein_coding MGP_129S1SvImJ_T0009424.1 MGP_129S1SvImJ_G0007559.1 mouse_genomes_project X 109732661 109765475 - Gm14936 lincRNA lincRNA MGP_129S1SvImJ_T0016608.1 MGP_129S1SvImJ_G0014697.1 mouse_genomes_project X 101092359 101092824 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097387.1 MGP_129S1SvImJ_G0036072.1 mouse_genomes_project X 131769939 131772342 + MGP_129S1SvImJ_P0097387 Rpl36a protein_coding protein_coding MGP_129S1SvImJ_T0097388.1 MGP_129S1SvImJ_G0036072.1 mouse_genomes_project X 131769974 131772348 + Rpl36a protein_coding retained_intron MGP_129S1SvImJ_T0097389.1 MGP_129S1SvImJ_G0036072.1 mouse_genomes_project X 131769975 131772348 + MGP_129S1SvImJ_P0097389 Rpl36a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097390.1 MGP_129S1SvImJ_G0036072.1 mouse_genomes_project X 131769986 131772319 + Rpl36a protein_coding retained_intron MGP_129S1SvImJ_T0097391.1 MGP_129S1SvImJ_G0036072.1 mouse_genomes_project X 131770375 131771302 + Rpl36a protein_coding retained_intron MGP_129S1SvImJ_T0097392.1 MGP_129S1SvImJ_G0036072.1 mouse_genomes_project X 131771366 131772282 + Rpl36a protein_coding retained_intron MGP_129S1SvImJ_T0011776.1 MGP_129S1SvImJ_G0009892.1 mouse_genomes_project X 62025403 62025668 + Gm23028 misc_RNA misc_RNA MGP_129S1SvImJ_T0016320.1 MGP_129S1SvImJ_G0014409.1 mouse_genomes_project X 42846683 42851763 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095905.1 MGP_129S1SvImJ_G0035651.1 mouse_genomes_project X 32759476 33255394 + MGP_129S1SvImJ_P0095905 protein_coding protein_coding MGP_129S1SvImJ_T0016617.1 MGP_129S1SvImJ_G0014706.1 mouse_genomes_project X 102488639 102489480 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097142.1 MGP_129S1SvImJ_G0035992.1 mouse_genomes_project X 101260314 101399762 - MGP_129S1SvImJ_P0097142 Zdhhc15 protein_coding protein_coding MGP_129S1SvImJ_T0009384.1 MGP_129S1SvImJ_G0007537.1 mouse_genomes_project X 48296158 48297580 - Gm28730 lincRNA lincRNA MGP_129S1SvImJ_T0009385.1 MGP_129S1SvImJ_G0007537.1 mouse_genomes_project X 48296166 48297564 - Gm28730 lincRNA lincRNA MGP_129S1SvImJ_T0009386.1 MGP_129S1SvImJ_G0007537.1 mouse_genomes_project X 48296271 48298124 - Gm28730 lincRNA lincRNA MGP_129S1SvImJ_T0097528.1 MGP_129S1SvImJ_G0036115.1 mouse_genomes_project X 134994653 136310935 + MGP_129S1SvImJ_P0097528 Il1rapl2 protein_coding protein_coding MGP_129S1SvImJ_T0097529.1 MGP_129S1SvImJ_G0036115.1 mouse_genomes_project X 134995064 135958244 + Il1rapl2 protein_coding retained_intron MGP_129S1SvImJ_T0097530.1 MGP_129S1SvImJ_G0036115.1 mouse_genomes_project X 135078396 136310613 + MGP_129S1SvImJ_P0097530 Il1rapl2 protein_coding protein_coding MGP_129S1SvImJ_T0097678.1 MGP_129S1SvImJ_G0036161.1 mouse_genomes_project X 142840390 142899839 - MGP_129S1SvImJ_P0097678 Lhfpl1 protein_coding protein_coding MGP_129S1SvImJ_T0097679.1 MGP_129S1SvImJ_G0036161.1 mouse_genomes_project X 142891899 142899978 - MGP_129S1SvImJ_P0097679 Lhfpl1 protein_coding protein_coding MGP_129S1SvImJ_T0016850.1 MGP_129S1SvImJ_G0014939.1 mouse_genomes_project X 151486222 151486988 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009432.1 MGP_129S1SvImJ_G0007567.1 mouse_genomes_project X 141704735 141717319 + lincRNA lincRNA MGP_129S1SvImJ_T0011797.1 MGP_129S1SvImJ_G0009913.1 mouse_genomes_project X 135598182 135598441 - Gm24675 misc_RNA misc_RNA MGP_129S1SvImJ_T0096087.1 MGP_129S1SvImJ_G0035705.1 mouse_genomes_project X 45042829 45043762 - MGP_129S1SvImJ_P0096087 Olfr1322 protein_coding protein_coding MGP_129S1SvImJ_T0096966.1 MGP_129S1SvImJ_G0035945.1 mouse_genomes_project X 97064987 97077992 + MGP_129S1SvImJ_P0096966 Arr3 protein_coding protein_coding MGP_129S1SvImJ_T0096967.1 MGP_129S1SvImJ_G0035945.1 mouse_genomes_project X 97065013 97073132 + Arr3 protein_coding retained_intron MGP_129S1SvImJ_T0096968.1 MGP_129S1SvImJ_G0035945.1 mouse_genomes_project X 97065034 97072572 + Arr3 protein_coding retained_intron MGP_129S1SvImJ_T0096969.1 MGP_129S1SvImJ_G0035945.1 mouse_genomes_project X 97065045 97073340 + Arr3 protein_coding retained_intron MGP_129S1SvImJ_T0096970.1 MGP_129S1SvImJ_G0035945.1 mouse_genomes_project X 97065049 97077886 + MGP_129S1SvImJ_P0096970 Arr3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0096971.1 MGP_129S1SvImJ_G0035945.1 mouse_genomes_project X 97065052 97077992 + Arr3 protein_coding retained_intron MGP_129S1SvImJ_T0096972.1 MGP_129S1SvImJ_G0035945.1 mouse_genomes_project X 97065137 97071443 + MGP_129S1SvImJ_P0096972 Arr3 protein_coding protein_coding MGP_129S1SvImJ_T0096973.1 MGP_129S1SvImJ_G0035945.1 mouse_genomes_project X 97071337 97073939 + Arr3 protein_coding retained_intron MGP_129S1SvImJ_T0016328.1 MGP_129S1SvImJ_G0014417.1 mouse_genomes_project X 45680838 45681221 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016334.1 MGP_129S1SvImJ_G0014423.1 mouse_genomes_project X 47998789 47999112 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018664.1 MGP_129S1SvImJ_G0015780.1 mouse_genomes_project X 48960717 48962081 - processed_transcript TEC MGP_129S1SvImJ_T0018665.1 MGP_129S1SvImJ_G0015780.1 mouse_genomes_project X 48961730 48980368 - processed_transcript lincRNA MGP_129S1SvImJ_T0098689.1 MGP_129S1SvImJ_G0036774.1 mouse_genomes_project X 149529555 149529674 + n-R5s13 rRNA rRNA MGP_129S1SvImJ_T0097442.1 MGP_129S1SvImJ_G0036089.1 mouse_genomes_project X 133088004 133107890 + Gprasp1 protein_coding processed_transcript MGP_129S1SvImJ_T0097444.1 MGP_129S1SvImJ_G0036089.1 mouse_genomes_project X 133088004 133154045 + MGP_129S1SvImJ_P0097444 Gprasp1 protein_coding protein_coding MGP_129S1SvImJ_T0097445.1 MGP_129S1SvImJ_G0036089.1 mouse_genomes_project X 133088004 133154045 + MGP_129S1SvImJ_P0097445 Gprasp1 protein_coding protein_coding MGP_129S1SvImJ_T0097446.1 MGP_129S1SvImJ_G0036089.1 mouse_genomes_project X 133088004 133154045 + MGP_129S1SvImJ_P0097446 Gprasp1 protein_coding protein_coding MGP_129S1SvImJ_T0097447.1 MGP_129S1SvImJ_G0036089.1 mouse_genomes_project X 133088006 133127003 + Gprasp1 protein_coding processed_transcript MGP_129S1SvImJ_T0016678.1 MGP_129S1SvImJ_G0014767.1 mouse_genomes_project X 114349239 114350932 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016827.1 MGP_129S1SvImJ_G0014916.1 mouse_genomes_project X 144535589 144537424 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097104.1 MGP_129S1SvImJ_G0035974.1 mouse_genomes_project X 99111980 99236488 - MGP_129S1SvImJ_P0097104 Phka1 protein_coding protein_coding MGP_129S1SvImJ_T0097105.1 MGP_129S1SvImJ_G0035974.1 mouse_genomes_project X 99111980 99236488 - MGP_129S1SvImJ_P0097105 Phka1 protein_coding protein_coding MGP_129S1SvImJ_T0097106.1 MGP_129S1SvImJ_G0035974.1 mouse_genomes_project X 99111980 99236488 - MGP_129S1SvImJ_P0097106 Phka1 protein_coding protein_coding MGP_129S1SvImJ_T0097107.1 MGP_129S1SvImJ_G0035974.1 mouse_genomes_project X 99111980 99236488 - MGP_129S1SvImJ_P0097107 Phka1 protein_coding protein_coding MGP_129S1SvImJ_T0097108.1 MGP_129S1SvImJ_G0035974.1 mouse_genomes_project X 99111980 99236488 - MGP_129S1SvImJ_P0097108 Phka1 protein_coding protein_coding MGP_129S1SvImJ_T0097109.1 MGP_129S1SvImJ_G0035974.1 mouse_genomes_project X 99111980 99236488 - MGP_129S1SvImJ_P0097109 Phka1 protein_coding protein_coding MGP_129S1SvImJ_T0097110.1 MGP_129S1SvImJ_G0035974.1 mouse_genomes_project X 99151862 99236488 - Phka1 protein_coding retained_intron MGP_129S1SvImJ_T0016692.1 MGP_129S1SvImJ_G0014781.1 mouse_genomes_project X 117031943 117032951 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016824.1 MGP_129S1SvImJ_G0014913.1 mouse_genomes_project X 144190392 144191600 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016733.1 MGP_129S1SvImJ_G0014822.1 mouse_genomes_project X 130350028 130351062 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009405.1 MGP_129S1SvImJ_G0007553.1 mouse_genomes_project X 97204350 97220871 + lincRNA lincRNA MGP_129S1SvImJ_T0016793.1 MGP_129S1SvImJ_G0014882.1 mouse_genomes_project X 139708191 139709133 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102863.1 MGP_129S1SvImJ_G0040695.1 mouse_genomes_project X 82494992 82496024 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0016273.1 MGP_129S1SvImJ_G0014362.1 mouse_genomes_project X 31584665 31585641 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096103.1 MGP_129S1SvImJ_G0035712.1 mouse_genomes_project X 46564575 46867411 - MGP_129S1SvImJ_P0096103 Hs6st2 protein_coding protein_coding MGP_129S1SvImJ_T0096104.1 MGP_129S1SvImJ_G0035712.1 mouse_genomes_project X 46564575 46867564 - MGP_129S1SvImJ_P0096104 Hs6st2 protein_coding protein_coding MGP_129S1SvImJ_T0096105.1 MGP_129S1SvImJ_G0035712.1 mouse_genomes_project X 46862490 46867056 - Hs6st2 protein_coding retained_intron MGP_129S1SvImJ_T0096106.1 MGP_129S1SvImJ_G0035712.1 mouse_genomes_project X 46865699 46866273 - Hs6st2 protein_coding processed_transcript MGP_129S1SvImJ_T0096107.1 MGP_129S1SvImJ_G0035712.1 mouse_genomes_project X 46865885 46866794 - Hs6st2 protein_coding processed_transcript MGP_129S1SvImJ_T0016322.1 MGP_129S1SvImJ_G0014411.1 mouse_genomes_project X 44068279 44068576 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016923.1 MGP_129S1SvImJ_G0015012.1 mouse_genomes_project X 166271366 166271835 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096741.1 MGP_129S1SvImJ_G0035877.1 mouse_genomes_project X 74092998 74098468 - MGP_129S1SvImJ_P0096741 protein_coding protein_coding MGP_129S1SvImJ_T0098131.1 MGP_129S1SvImJ_G0036269.1 mouse_genomes_project X 165373721 165375943 - MGP_129S1SvImJ_P0098131 Tmsb4x protein_coding protein_coding MGP_129S1SvImJ_T0098132.1 MGP_129S1SvImJ_G0036269.1 mouse_genomes_project X 165373723 165375777 - MGP_129S1SvImJ_P0098132 Tmsb4x protein_coding protein_coding MGP_129S1SvImJ_T0098133.1 MGP_129S1SvImJ_G0036269.1 mouse_genomes_project X 165373920 165375455 - MGP_129S1SvImJ_P0098133 Tmsb4x protein_coding protein_coding MGP_129S1SvImJ_T0095425.1 MGP_129S1SvImJ_G0035505.1 mouse_genomes_project X 1026243 1265550 + MGP_129S1SvImJ_P0095425 Shroom4 protein_coding protein_coding MGP_129S1SvImJ_T0095426.1 MGP_129S1SvImJ_G0035505.1 mouse_genomes_project X 1041931 1207215 + MGP_129S1SvImJ_P0095426 Shroom4 protein_coding protein_coding MGP_129S1SvImJ_T0095427.1 MGP_129S1SvImJ_G0035505.1 mouse_genomes_project X 1200960 1269161 + MGP_129S1SvImJ_P0095427 Shroom4 protein_coding protein_coding MGP_129S1SvImJ_T0097680.1 MGP_129S1SvImJ_G0036162.1 mouse_genomes_project X 143003354 143062465 - MGP_129S1SvImJ_P0097680 Amot protein_coding protein_coding MGP_129S1SvImJ_T0097681.1 MGP_129S1SvImJ_G0036162.1 mouse_genomes_project X 143008758 143044482 - MGP_129S1SvImJ_P0097681 Amot protein_coding protein_coding MGP_129S1SvImJ_T0097682.1 MGP_129S1SvImJ_G0036162.1 mouse_genomes_project X 143016638 143018803 - Amot protein_coding retained_intron MGP_129S1SvImJ_T0097683.1 MGP_129S1SvImJ_G0036162.1 mouse_genomes_project X 143032569 143062571 - MGP_129S1SvImJ_P0097683 Amot protein_coding protein_coding MGP_129S1SvImJ_T0095421.1 MGP_129S1SvImJ_G0035502.1 mouse_genomes_project X 690351 692552 - MGP_129S1SvImJ_P0095421 AU022751 protein_coding protein_coding MGP_129S1SvImJ_T0095422.1 MGP_129S1SvImJ_G0035502.1 mouse_genomes_project X 690351 692552 - MGP_129S1SvImJ_P0095422 AU022751 protein_coding protein_coding MGP_129S1SvImJ_T0097357.1 MGP_129S1SvImJ_G0036062.1 mouse_genomes_project X 131301498 131315338 - MGP_129S1SvImJ_P0097357 Xkrx protein_coding protein_coding MGP_129S1SvImJ_T0097358.1 MGP_129S1SvImJ_G0036062.1 mouse_genomes_project X 131303619 131315486 - Xkrx protein_coding processed_transcript MGP_129S1SvImJ_T0100273.1 MGP_129S1SvImJ_G0038340.1 mouse_genomes_project X 107474224 107474415 - Gm26108 snRNA snRNA MGP_129S1SvImJ_T0102857.1 MGP_129S1SvImJ_G0040689.1 mouse_genomes_project X 72224845 72225805 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0098011.1 MGP_129S1SvImJ_G0036238.1 mouse_genomes_project X 159803798 160145298 - MGP_129S1SvImJ_P0098011 Nhs protein_coding protein_coding MGP_129S1SvImJ_T0098012.1 MGP_129S1SvImJ_G0036238.1 mouse_genomes_project X 159807317 160144956 - MGP_129S1SvImJ_P0098012 Nhs protein_coding protein_coding MGP_129S1SvImJ_T0016750.1 MGP_129S1SvImJ_G0014839.1 mouse_genomes_project X 133983251 133983881 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096128.1 MGP_129S1SvImJ_G0035722.1 mouse_genomes_project X 48525672 48555541 + MGP_129S1SvImJ_P0096128 Fam122c protein_coding protein_coding MGP_129S1SvImJ_T0096129.1 MGP_129S1SvImJ_G0035722.1 mouse_genomes_project X 48525672 48588020 + MGP_129S1SvImJ_P0096129 Fam122c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096130.1 MGP_129S1SvImJ_G0035722.1 mouse_genomes_project X 48525681 48588020 + MGP_129S1SvImJ_P0096130 Fam122c protein_coding protein_coding MGP_129S1SvImJ_T0096877.1 MGP_129S1SvImJ_G0035918.1 mouse_genomes_project X 91806396 91814185 - MGP_129S1SvImJ_P0096877 Asb12 protein_coding protein_coding MGP_129S1SvImJ_T0098151.1 MGP_129S1SvImJ_G0036274.1 mouse_genomes_project X 166856308 166877583 - MGP_129S1SvImJ_P0098151 Msl3 protein_coding protein_coding MGP_129S1SvImJ_T0098152.1 MGP_129S1SvImJ_G0036274.1 mouse_genomes_project X 166859170 166864067 - Msl3 protein_coding retained_intron MGP_129S1SvImJ_T0098153.1 MGP_129S1SvImJ_G0036274.1 mouse_genomes_project X 166863738 166876273 - Msl3 protein_coding retained_intron MGP_129S1SvImJ_T0016700.1 MGP_129S1SvImJ_G0014789.1 mouse_genomes_project X 118230789 118232227 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016729.1 MGP_129S1SvImJ_G0014818.1 mouse_genomes_project X 129300668 129301611 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097598.1 MGP_129S1SvImJ_G0036136.1 mouse_genomes_project X 138224559 138238659 + MGP_129S1SvImJ_P0097598 Mid2 protein_coding protein_coding MGP_129S1SvImJ_T0097599.1 MGP_129S1SvImJ_G0036136.1 mouse_genomes_project X 138224916 138337594 + MGP_129S1SvImJ_P0097599 Mid2 protein_coding protein_coding MGP_129S1SvImJ_T0097600.1 MGP_129S1SvImJ_G0036136.1 mouse_genomes_project X 138225032 138333874 + MGP_129S1SvImJ_P0097600 Mid2 protein_coding protein_coding MGP_129S1SvImJ_T0097601.1 MGP_129S1SvImJ_G0036136.1 mouse_genomes_project X 138237978 138337594 + MGP_129S1SvImJ_P0097601 Mid2 protein_coding protein_coding MGP_129S1SvImJ_T0097602.1 MGP_129S1SvImJ_G0036136.1 mouse_genomes_project X 138317890 138321037 + Mid2 protein_coding retained_intron MGP_129S1SvImJ_T0009419.1 MGP_129S1SvImJ_G0007557.1 mouse_genomes_project X 101556703 101581982 + 1700121L16Rik lincRNA lincRNA MGP_129S1SvImJ_T0096133.1 MGP_129S1SvImJ_G0035724.1 mouse_genomes_project X 48703333 48711801 + MGP_129S1SvImJ_P0096133 Etd protein_coding protein_coding MGP_129S1SvImJ_T0016681.1 MGP_129S1SvImJ_G0014770.1 mouse_genomes_project X 114704066 114706163 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016304.1 MGP_129S1SvImJ_G0014393.1 mouse_genomes_project X 38552271 38552443 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011785.1 MGP_129S1SvImJ_G0009901.1 mouse_genomes_project X 100140282 100140405 + Gm27875 misc_RNA misc_RNA MGP_129S1SvImJ_T0016554.1 MGP_129S1SvImJ_G0014643.1 mouse_genomes_project X 93556998 93558262 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016201.1 MGP_129S1SvImJ_G0014290.1 mouse_genomes_project X 3598783 3599802 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096433.1 MGP_129S1SvImJ_G0035825.1 mouse_genomes_project X 69669872 69672199 + MGP_129S1SvImJ_P0096433 Avpr2 protein_coding protein_coding MGP_129S1SvImJ_T0096434.1 MGP_129S1SvImJ_G0035825.1 mouse_genomes_project X 69669873 69671192 + Avpr2 protein_coding processed_transcript MGP_129S1SvImJ_T0096435.1 MGP_129S1SvImJ_G0035825.1 mouse_genomes_project X 69669880 69673273 + MGP_129S1SvImJ_P0096435 Avpr2 protein_coding protein_coding MGP_129S1SvImJ_T0096436.1 MGP_129S1SvImJ_G0035825.1 mouse_genomes_project X 69669884 69671968 + MGP_129S1SvImJ_P0096436 Avpr2 protein_coding protein_coding MGP_129S1SvImJ_T0016751.1 MGP_129S1SvImJ_G0014840.1 mouse_genomes_project X 134109638 134110045 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016639.1 MGP_129S1SvImJ_G0014728.1 mouse_genomes_project X 106231689 106235757 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101799.1 MGP_129S1SvImJ_G0039766.1 mouse_genomes_project X 68561085 68561984 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101800.1 MGP_129S1SvImJ_G0039766.1 mouse_genomes_project X 68561085 68561817 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0016292.1 MGP_129S1SvImJ_G0014381.1 mouse_genomes_project X 35718124 35718403 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016620.1 MGP_129S1SvImJ_G0014709.1 mouse_genomes_project X 103088526 103091711 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016908.1 MGP_129S1SvImJ_G0014997.1 mouse_genomes_project X 161849964 161850180 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016806.1 MGP_129S1SvImJ_G0014895.1 mouse_genomes_project X 141836418 141839026 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097116.1 MGP_129S1SvImJ_G0035978.1 mouse_genomes_project X 99401116 99408095 + MGP_129S1SvImJ_P0097116 Dmrtc1c1 protein_coding protein_coding MGP_129S1SvImJ_T0097118.1 MGP_129S1SvImJ_G0035978.1 mouse_genomes_project X 99402376 99404070 + MGP_129S1SvImJ_P0097118 Dmrtc1c1 protein_coding protein_coding MGP_129S1SvImJ_T0016779.1 MGP_129S1SvImJ_G0014868.1 mouse_genomes_project X 138776603 138776959 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016640.1 MGP_129S1SvImJ_G0014729.1 mouse_genomes_project X 106748066 106749618 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016646.1 MGP_129S1SvImJ_G0014735.1 mouse_genomes_project X 108600825 108601373 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016247.1 MGP_129S1SvImJ_G0014336.1 mouse_genomes_project X 14599663 14600060 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016666.1 MGP_129S1SvImJ_G0014755.1 mouse_genomes_project X 111737486 111737945 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011774.1 MGP_129S1SvImJ_G0009890.1 mouse_genomes_project X 45172431 45172726 + Gm23385 misc_RNA misc_RNA MGP_129S1SvImJ_T0095716.1 MGP_129S1SvImJ_G0035580.1 mouse_genomes_project X 11559322 11679341 - MGP_129S1SvImJ_P0095716 Maob protein_coding protein_coding MGP_129S1SvImJ_T0095717.1 MGP_129S1SvImJ_G0035580.1 mouse_genomes_project X 11560079 11679250 - MGP_129S1SvImJ_P0095717 Maob protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095718.1 MGP_129S1SvImJ_G0035580.1 mouse_genomes_project X 11568454 11679250 - MGP_129S1SvImJ_P0095718 Maob protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095719.1 MGP_129S1SvImJ_G0035580.1 mouse_genomes_project X 11589825 11679295 - MGP_129S1SvImJ_P0095719 Maob protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0102851.1 MGP_129S1SvImJ_G0040683.1 mouse_genomes_project X 66010298 66011138 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0095659.1 MGP_129S1SvImJ_G0035564.1 mouse_genomes_project X 5230453 5342470 + Tspan7 protein_coding retained_intron MGP_129S1SvImJ_T0095660.1 MGP_129S1SvImJ_G0035564.1 mouse_genomes_project X 5230453 5342470 + MGP_129S1SvImJ_P0095660 Tspan7 protein_coding protein_coding MGP_129S1SvImJ_T0095661.1 MGP_129S1SvImJ_G0035564.1 mouse_genomes_project X 5230453 5342470 + MGP_129S1SvImJ_P0095661 Tspan7 protein_coding protein_coding MGP_129S1SvImJ_T0102876.1 MGP_129S1SvImJ_G0040708.1 mouse_genomes_project X 133871389 133873304 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0011239.1 MGP_129S1SvImJ_G0009355.1 mouse_genomes_project X 144626998 144627085 + Mir1912 miRNA miRNA MGP_129S1SvImJ_T0016426.1 MGP_129S1SvImJ_G0014515.1 mouse_genomes_project X 70316747 70317135 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095712.1 MGP_129S1SvImJ_G0035577.1 mouse_genomes_project X 11388493 11389314 + MGP_129S1SvImJ_P0095712 Cypt1 protein_coding protein_coding MGP_129S1SvImJ_T0095713.1 MGP_129S1SvImJ_G0035577.1 mouse_genomes_project X 11388496 11389313 + MGP_129S1SvImJ_P0095713 Cypt1 protein_coding protein_coding MGP_129S1SvImJ_T0095988.1 MGP_129S1SvImJ_G0035676.1 mouse_genomes_project X 37560037 37561871 + MGP_129S1SvImJ_P0095988 Gm43337 protein_coding protein_coding MGP_129S1SvImJ_T0016198.1 MGP_129S1SvImJ_G0014287.1 mouse_genomes_project X 3297608 3299135 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095901.1 MGP_129S1SvImJ_G0035648.1 mouse_genomes_project X 32684226 32688460 - MGP_129S1SvImJ_P0095901 Rhox2e protein_coding protein_coding MGP_129S1SvImJ_T0097873.1 MGP_129S1SvImJ_G0036201.1 mouse_genomes_project X 151967877 151972716 - MGP_129S1SvImJ_P0097873 protein_coding protein_coding MGP_129S1SvImJ_T0016276.1 MGP_129S1SvImJ_G0014365.1 mouse_genomes_project X 33354727 33356546 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016761.1 MGP_129S1SvImJ_G0014850.1 mouse_genomes_project X 134558333 134560150 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011165.1 MGP_129S1SvImJ_G0009281.1 mouse_genomes_project X 47958692 47958757 - Mir106a miRNA miRNA MGP_129S1SvImJ_T0095620.1 MGP_129S1SvImJ_G0035546.1 mouse_genomes_project X 2928559 2930620 + MGP_129S1SvImJ_P0095620 Slc38a5 protein_coding protein_coding MGP_129S1SvImJ_T0095621.1 MGP_129S1SvImJ_G0035546.1 mouse_genomes_project X 2928577 2938725 + MGP_129S1SvImJ_P0095621 Slc38a5 protein_coding protein_coding MGP_129S1SvImJ_T0095622.1 MGP_129S1SvImJ_G0035546.1 mouse_genomes_project X 2928804 2938725 + MGP_129S1SvImJ_P0095622 Slc38a5 protein_coding protein_coding MGP_129S1SvImJ_T0095623.1 MGP_129S1SvImJ_G0035546.1 mouse_genomes_project X 2929376 2938720 + MGP_129S1SvImJ_P0095623 Slc38a5 protein_coding protein_coding MGP_129S1SvImJ_T0005633.1 MGP_129S1SvImJ_G0004747.1 mouse_genomes_project X 153530760 153531333 + Gm15156 antisense antisense MGP_129S1SvImJ_T0016526.1 MGP_129S1SvImJ_G0014615.1 mouse_genomes_project X 90371442 90371944 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016474.1 MGP_129S1SvImJ_G0014563.1 mouse_genomes_project X 80922308 80922620 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095946.1 MGP_129S1SvImJ_G0035670.1 mouse_genomes_project X 34339434 34340127 + MGP_129S1SvImJ_P0095946 Cypt14 protein_coding protein_coding MGP_129S1SvImJ_T0016752.1 MGP_129S1SvImJ_G0014841.1 mouse_genomes_project X 134144221 134144559 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097605.1 MGP_129S1SvImJ_G0036138.1 mouse_genomes_project X 138482599 138515954 + MGP_129S1SvImJ_P0097605 Vsig1 protein_coding protein_coding MGP_129S1SvImJ_T0097606.1 MGP_129S1SvImJ_G0036138.1 mouse_genomes_project X 138499643 138514715 + Vsig1 protein_coding processed_transcript MGP_129S1SvImJ_T0011225.1 MGP_129S1SvImJ_G0009341.1 mouse_genomes_project X 103188686 103188796 + Mir6382 miRNA miRNA MGP_129S1SvImJ_T0016835.1 MGP_129S1SvImJ_G0014924.1 mouse_genomes_project X 148730502 148731161 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097507.1 MGP_129S1SvImJ_G0036111.1 mouse_genomes_project X 134389546 134454093 - MGP_129S1SvImJ_P0097507 Slc25a53 protein_coding protein_coding MGP_129S1SvImJ_T0097508.1 MGP_129S1SvImJ_G0036111.1 mouse_genomes_project X 134389552 134454071 - MGP_129S1SvImJ_P0097508 Slc25a53 protein_coding protein_coding MGP_129S1SvImJ_T0097509.1 MGP_129S1SvImJ_G0036111.1 mouse_genomes_project X 134389552 134407215 - MGP_129S1SvImJ_P0097509 Slc25a53 protein_coding protein_coding MGP_129S1SvImJ_T0097510.1 MGP_129S1SvImJ_G0036111.1 mouse_genomes_project X 134393967 134407240 - MGP_129S1SvImJ_P0097510 Slc25a53 protein_coding protein_coding MGP_129S1SvImJ_T0097511.1 MGP_129S1SvImJ_G0036111.1 mouse_genomes_project X 134394109 134407272 - MGP_129S1SvImJ_P0097511 Slc25a53 protein_coding protein_coding MGP_129S1SvImJ_T0097515.1 MGP_129S1SvImJ_G0036111.1 mouse_genomes_project X 134415416 134445875 - Slc25a53 protein_coding retained_intron MGP_129S1SvImJ_T0097516.1 MGP_129S1SvImJ_G0036111.1 mouse_genomes_project X 134415453 134454095 - Slc25a53 protein_coding processed_transcript MGP_129S1SvImJ_T0097517.1 MGP_129S1SvImJ_G0036111.1 mouse_genomes_project X 134417180 134453825 - Slc25a53 protein_coding processed_transcript MGP_129S1SvImJ_T0097518.1 MGP_129S1SvImJ_G0036111.1 mouse_genomes_project X 134417181 134454065 - Slc25a53 protein_coding processed_transcript MGP_129S1SvImJ_T0097519.1 MGP_129S1SvImJ_G0036111.1 mouse_genomes_project X 134417949 134433800 - Slc25a53 protein_coding processed_transcript MGP_129S1SvImJ_T0097520.1 MGP_129S1SvImJ_G0036111.1 mouse_genomes_project X 134431313 134454092 - Slc25a53 protein_coding processed_transcript MGP_129S1SvImJ_T0097521.1 MGP_129S1SvImJ_G0036111.1 mouse_genomes_project X 134445797 134453817 - Slc25a53 protein_coding processed_transcript MGP_129S1SvImJ_T0097522.1 MGP_129S1SvImJ_G0036111.1 mouse_genomes_project X 134447582 134454095 - Slc25a53 protein_coding retained_intron MGP_129S1SvImJ_T0097523.1 MGP_129S1SvImJ_G0036111.1 mouse_genomes_project X 134448191 134453801 - Slc25a53 protein_coding processed_transcript MGP_129S1SvImJ_T0097590.1 MGP_129S1SvImJ_G0036134.1 mouse_genomes_project X 138005982 138016165 + Prps1 protein_coding processed_transcript MGP_129S1SvImJ_T0097591.1 MGP_129S1SvImJ_G0036134.1 mouse_genomes_project X 138005982 138026861 + MGP_129S1SvImJ_P0097591 Prps1 protein_coding protein_coding MGP_129S1SvImJ_T0096345.1 MGP_129S1SvImJ_G0035801.1 mouse_genomes_project X 68867329 68873780 + MGP_129S1SvImJ_P0096345 protein_coding protein_coding MGP_129S1SvImJ_T0011803.1 MGP_129S1SvImJ_G0009919.1 mouse_genomes_project X 160695322 160695623 + Gm22257 misc_RNA misc_RNA MGP_129S1SvImJ_T0096467.1 MGP_129S1SvImJ_G0035827.1 mouse_genomes_project X 69704289 69713013 - MGP_129S1SvImJ_P0096467 Renbp protein_coding protein_coding MGP_129S1SvImJ_T0096468.1 MGP_129S1SvImJ_G0035827.1 mouse_genomes_project X 69704289 69712955 - MGP_129S1SvImJ_P0096468 Renbp protein_coding protein_coding MGP_129S1SvImJ_T0096469.1 MGP_129S1SvImJ_G0035827.1 mouse_genomes_project X 69704290 69708567 - Renbp protein_coding retained_intron MGP_129S1SvImJ_T0096470.1 MGP_129S1SvImJ_G0035827.1 mouse_genomes_project X 69704291 69712980 - Renbp protein_coding retained_intron MGP_129S1SvImJ_T0096471.1 MGP_129S1SvImJ_G0035827.1 mouse_genomes_project X 69704307 69712919 - MGP_129S1SvImJ_P0096471 Renbp protein_coding protein_coding MGP_129S1SvImJ_T0096472.1 MGP_129S1SvImJ_G0035827.1 mouse_genomes_project X 69707428 69711292 - Renbp protein_coding processed_transcript MGP_129S1SvImJ_T0096473.1 MGP_129S1SvImJ_G0035827.1 mouse_genomes_project X 69708432 69710246 - Renbp protein_coding retained_intron MGP_129S1SvImJ_T0096474.1 MGP_129S1SvImJ_G0035827.1 mouse_genomes_project X 69710404 69712904 - Renbp protein_coding retained_intron MGP_129S1SvImJ_T0096475.1 MGP_129S1SvImJ_G0035827.1 mouse_genomes_project X 69711304 69712908 - MGP_129S1SvImJ_P0096475 Renbp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096476.1 MGP_129S1SvImJ_G0035827.1 mouse_genomes_project X 69711751 69712915 - Renbp protein_coding retained_intron MGP_129S1SvImJ_T0009395.1 MGP_129S1SvImJ_G0007544.1 mouse_genomes_project X 71774372 71785799 - Gm14715 lincRNA lincRNA MGP_129S1SvImJ_T0101536.1 MGP_129S1SvImJ_G0039603.1 mouse_genomes_project X 117918227 117918355 + Gm22590 snoRNA snoRNA MGP_129S1SvImJ_T0016918.1 MGP_129S1SvImJ_G0015007.1 mouse_genomes_project X 165093978 165094425 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016805.1 MGP_129S1SvImJ_G0014894.1 mouse_genomes_project X 141822050 141822206 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016881.1 MGP_129S1SvImJ_G0014970.1 mouse_genomes_project X 156412472 156413450 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097980.1 MGP_129S1SvImJ_G0036231.1 mouse_genomes_project X 158435236 158460889 + MGP_129S1SvImJ_P0097980 Phka2 protein_coding protein_coding MGP_129S1SvImJ_T0097981.1 MGP_129S1SvImJ_G0036231.1 mouse_genomes_project X 158435498 158462925 + Phka2 protein_coding retained_intron MGP_129S1SvImJ_T0097982.1 MGP_129S1SvImJ_G0036231.1 mouse_genomes_project X 158435498 158531676 + MGP_129S1SvImJ_P0097982 Phka2 protein_coding protein_coding MGP_129S1SvImJ_T0097983.1 MGP_129S1SvImJ_G0036231.1 mouse_genomes_project X 158435529 158488741 + MGP_129S1SvImJ_P0097983 Phka2 protein_coding protein_coding MGP_129S1SvImJ_T0097984.1 MGP_129S1SvImJ_G0036231.1 mouse_genomes_project X 158435876 158523842 + MGP_129S1SvImJ_P0097984 Phka2 protein_coding protein_coding MGP_129S1SvImJ_T0097985.1 MGP_129S1SvImJ_G0036231.1 mouse_genomes_project X 158456460 158471287 + Phka2 protein_coding processed_transcript MGP_129S1SvImJ_T0097986.1 MGP_129S1SvImJ_G0036231.1 mouse_genomes_project X 158456470 158471282 + Phka2 protein_coding processed_transcript MGP_129S1SvImJ_T0097987.1 MGP_129S1SvImJ_G0036231.1 mouse_genomes_project X 158464006 158523874 + Phka2 protein_coding processed_transcript MGP_129S1SvImJ_T0097988.1 MGP_129S1SvImJ_G0036231.1 mouse_genomes_project X 158487572 158492535 + Phka2 protein_coding processed_transcript MGP_129S1SvImJ_T0016245.1 MGP_129S1SvImJ_G0014334.1 mouse_genomes_project X 13804451 13805068 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096228.1 MGP_129S1SvImJ_G0035759.1 mouse_genomes_project X 56288376 56290441 - MGP_129S1SvImJ_P0096228 Sox3 protein_coding protein_coding MGP_129S1SvImJ_T0097897.1 MGP_129S1SvImJ_G0036214.1 mouse_genomes_project X 153480565 153531297 - MGP_129S1SvImJ_P0097897 Ptchd1 protein_coding protein_coding MGP_129S1SvImJ_T0097898.1 MGP_129S1SvImJ_G0036214.1 mouse_genomes_project X 153480651 153531090 - MGP_129S1SvImJ_P0097898 Ptchd1 protein_coding protein_coding MGP_129S1SvImJ_T0097899.1 MGP_129S1SvImJ_G0036214.1 mouse_genomes_project X 153494801 153531786 - Ptchd1 protein_coding processed_transcript MGP_129S1SvImJ_T0016877.1 MGP_129S1SvImJ_G0014966.1 mouse_genomes_project X 156076838 156079500 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097147.1 MGP_129S1SvImJ_G0035995.1 mouse_genomes_project X 101875490 101879040 + MGP_129S1SvImJ_P0097147 Magee1 protein_coding protein_coding MGP_129S1SvImJ_T0101801.1 MGP_129S1SvImJ_G0039767.1 mouse_genomes_project X 70051670 70052013 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0016557.1 MGP_129S1SvImJ_G0014646.1 mouse_genomes_project X 94899815 94900303 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096113.1 MGP_129S1SvImJ_G0035716.1 mouse_genomes_project X 47484517 47825882 - MGP_129S1SvImJ_P0096113 Gpc3 protein_coding protein_coding MGP_129S1SvImJ_T0096114.1 MGP_129S1SvImJ_G0035716.1 mouse_genomes_project X 47595837 47825911 - MGP_129S1SvImJ_P0096114 Gpc3 protein_coding protein_coding MGP_129S1SvImJ_T0098088.1 MGP_129S1SvImJ_G0036258.1 mouse_genomes_project X 162609724 162643009 + MGP_129S1SvImJ_P0098088 Asb9 protein_coding protein_coding MGP_129S1SvImJ_T0018674.1 MGP_129S1SvImJ_G0015785.1 mouse_genomes_project X 97200261 97204187 - Gm14866 processed_transcript processed_transcript MGP_129S1SvImJ_T0016316.1 MGP_129S1SvImJ_G0014405.1 mouse_genomes_project X 41573712 41574120 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100233.1 MGP_129S1SvImJ_G0038300.1 mouse_genomes_project X 17330898 17331001 + Gm25812 snRNA snRNA MGP_129S1SvImJ_T0096419.1 MGP_129S1SvImJ_G0035823.1 mouse_genomes_project X 69631358 69647518 - MGP_129S1SvImJ_P0096419 L1cam protein_coding protein_coding MGP_129S1SvImJ_T0096420.1 MGP_129S1SvImJ_G0035823.1 mouse_genomes_project X 69631535 69658283 - MGP_129S1SvImJ_P0096420 L1cam protein_coding protein_coding MGP_129S1SvImJ_T0096421.1 MGP_129S1SvImJ_G0035823.1 mouse_genomes_project X 69632263 69647386 - MGP_129S1SvImJ_P0096421 L1cam protein_coding protein_coding MGP_129S1SvImJ_T0096422.1 MGP_129S1SvImJ_G0035823.1 mouse_genomes_project X 69632490 69633986 - L1cam protein_coding retained_intron MGP_129S1SvImJ_T0096423.1 MGP_129S1SvImJ_G0035823.1 mouse_genomes_project X 69632596 69634354 - MGP_129S1SvImJ_P0096423 L1cam protein_coding protein_coding MGP_129S1SvImJ_T0096424.1 MGP_129S1SvImJ_G0035823.1 mouse_genomes_project X 69634016 69635256 - L1cam protein_coding retained_intron MGP_129S1SvImJ_T0096425.1 MGP_129S1SvImJ_G0035823.1 mouse_genomes_project X 69634270 69635006 - L1cam protein_coding retained_intron MGP_129S1SvImJ_T0096426.1 MGP_129S1SvImJ_G0035823.1 mouse_genomes_project X 69635073 69636225 - L1cam protein_coding retained_intron MGP_129S1SvImJ_T0096427.1 MGP_129S1SvImJ_G0035823.1 mouse_genomes_project X 69636664 69637747 - L1cam protein_coding retained_intron MGP_129S1SvImJ_T0096428.1 MGP_129S1SvImJ_G0035823.1 mouse_genomes_project X 69637017 69638715 - MGP_129S1SvImJ_P0096428 L1cam protein_coding protein_coding MGP_129S1SvImJ_T0096429.1 MGP_129S1SvImJ_G0035823.1 mouse_genomes_project X 69641304 69658244 - L1cam protein_coding retained_intron MGP_129S1SvImJ_T0096430.1 MGP_129S1SvImJ_G0035823.1 mouse_genomes_project X 69643268 69673876 - L1cam protein_coding processed_transcript MGP_129S1SvImJ_T0096431.1 MGP_129S1SvImJ_G0035823.1 mouse_genomes_project X 69643345 69647897 - MGP_129S1SvImJ_P0096431 L1cam protein_coding protein_coding MGP_129S1SvImJ_T0016370.1 MGP_129S1SvImJ_G0014459.1 mouse_genomes_project X 57030195 57030630 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016314.1 MGP_129S1SvImJ_G0014403.1 mouse_genomes_project X 40886565 40886800 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095592.1 MGP_129S1SvImJ_G0035541.1 mouse_genomes_project X 2785159 2787393 - Rbm3 protein_coding processed_transcript MGP_129S1SvImJ_T0095593.1 MGP_129S1SvImJ_G0035541.1 mouse_genomes_project X 2785162 2792331 - MGP_129S1SvImJ_P0095593 Rbm3 protein_coding protein_coding MGP_129S1SvImJ_T0095594.1 MGP_129S1SvImJ_G0035541.1 mouse_genomes_project X 2786968 2792313 - MGP_129S1SvImJ_P0095594 Rbm3 protein_coding protein_coding MGP_129S1SvImJ_T0095595.1 MGP_129S1SvImJ_G0035541.1 mouse_genomes_project X 2789661 2792331 - MGP_129S1SvImJ_P0095595 Rbm3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095596.1 MGP_129S1SvImJ_G0035541.1 mouse_genomes_project X 2789884 2792356 - Rbm3 protein_coding retained_intron MGP_129S1SvImJ_T0095597.1 MGP_129S1SvImJ_G0035541.1 mouse_genomes_project X 2791107 2792393 - Rbm3 protein_coding retained_intron MGP_129S1SvImJ_T0016746.1 MGP_129S1SvImJ_G0014835.1 mouse_genomes_project X 133090448 133092269 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016703.1 MGP_129S1SvImJ_G0014792.1 mouse_genomes_project X 118778550 118779668 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016341.1 MGP_129S1SvImJ_G0014430.1 mouse_genomes_project X 49050207 49050501 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096145.1 MGP_129S1SvImJ_G0035735.1 mouse_genomes_project X 51743202 51795769 + Ddx26b protein_coding processed_transcript MGP_129S1SvImJ_T0096146.1 MGP_129S1SvImJ_G0035735.1 mouse_genomes_project X 51743222 51795768 + MGP_129S1SvImJ_P0096146 Ddx26b protein_coding protein_coding MGP_129S1SvImJ_T0096147.1 MGP_129S1SvImJ_G0035735.1 mouse_genomes_project X 51743225 51783661 + MGP_129S1SvImJ_P0096147 Ddx26b protein_coding protein_coding MGP_129S1SvImJ_T0096148.1 MGP_129S1SvImJ_G0035735.1 mouse_genomes_project X 51743230 51795769 + MGP_129S1SvImJ_P0096148 Ddx26b protein_coding protein_coding MGP_129S1SvImJ_T0096149.1 MGP_129S1SvImJ_G0035735.1 mouse_genomes_project X 51743230 51795772 + MGP_129S1SvImJ_P0096149 Ddx26b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096150.1 MGP_129S1SvImJ_G0035735.1 mouse_genomes_project X 51771758 51795767 + MGP_129S1SvImJ_P0096150 Ddx26b protein_coding protein_coding MGP_129S1SvImJ_T0096151.1 MGP_129S1SvImJ_G0035735.1 mouse_genomes_project X 51793003 51795614 + MGP_129S1SvImJ_P0096151 Ddx26b protein_coding protein_coding MGP_129S1SvImJ_T0100281.1 MGP_129S1SvImJ_G0038348.1 mouse_genomes_project X 125744888 125744996 + Gm24522 snRNA snRNA MGP_129S1SvImJ_T0097902.1 MGP_129S1SvImJ_G0036216.1 mouse_genomes_project X 155046095 155301382 - MGP_129S1SvImJ_P0097902 Phex protein_coding protein_coding MGP_129S1SvImJ_T0097903.1 MGP_129S1SvImJ_G0036216.1 mouse_genomes_project X 155049580 155289404 - MGP_129S1SvImJ_P0097903 Phex protein_coding protein_coding MGP_129S1SvImJ_T0097904.1 MGP_129S1SvImJ_G0036216.1 mouse_genomes_project X 155104084 155301408 - MGP_129S1SvImJ_P0097904 Phex protein_coding protein_coding MGP_129S1SvImJ_T0016240.1 MGP_129S1SvImJ_G0014329.1 mouse_genomes_project X 11466031 11467206 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096045.1 MGP_129S1SvImJ_G0035693.1 mouse_genomes_project X 43640098 43678953 - Aifm1 protein_coding retained_intron MGP_129S1SvImJ_T0096046.1 MGP_129S1SvImJ_G0035693.1 mouse_genomes_project X 43640098 43679086 - MGP_129S1SvImJ_P0096046 Aifm1 protein_coding protein_coding MGP_129S1SvImJ_T0096047.1 MGP_129S1SvImJ_G0035693.1 mouse_genomes_project X 43640098 43679090 - MGP_129S1SvImJ_P0096047 Aifm1 protein_coding protein_coding MGP_129S1SvImJ_T0096048.1 MGP_129S1SvImJ_G0035693.1 mouse_genomes_project X 43640099 43648055 - Aifm1 protein_coding processed_transcript MGP_129S1SvImJ_T0096049.1 MGP_129S1SvImJ_G0035693.1 mouse_genomes_project X 43650616 43651677 - Aifm1 protein_coding processed_transcript MGP_129S1SvImJ_T0016499.1 MGP_129S1SvImJ_G0014588.1 mouse_genomes_project X 85320071 85321030 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011249.1 MGP_129S1SvImJ_G0009365.1 mouse_genomes_project X 165116364 165116492 + Gm44376 miRNA miRNA MGP_129S1SvImJ_T0005617.1 MGP_129S1SvImJ_G0004736.1 mouse_genomes_project X 81833859 81838740 + Gm14764 antisense antisense MGP_129S1SvImJ_T0011805.1 MGP_129S1SvImJ_G0009921.1 mouse_genomes_project X 161110682 161110938 - Gm23501 misc_RNA misc_RNA MGP_129S1SvImJ_T0098009.1 MGP_129S1SvImJ_G0036237.1 mouse_genomes_project X 159677239 159742747 + MGP_129S1SvImJ_P0098009 Rai2 protein_coding protein_coding MGP_129S1SvImJ_T0098010.1 MGP_129S1SvImJ_G0036237.1 mouse_genomes_project X 159677797 159742749 + MGP_129S1SvImJ_P0098010 Rai2 protein_coding protein_coding MGP_129S1SvImJ_T0098766.1 MGP_129S1SvImJ_G0036851.1 mouse_genomes_project X 30723260 30723535 + Gm25624 scaRNA scaRNA MGP_129S1SvImJ_T0095495.1 MGP_129S1SvImJ_G0035521.1 mouse_genomes_project X 2343271 2345897 + MGP_129S1SvImJ_P0095495 Praf2 protein_coding protein_coding MGP_129S1SvImJ_T0011786.1 MGP_129S1SvImJ_G0009902.1 mouse_genomes_project X 100261836 100261907 + Gm27798 misc_RNA misc_RNA MGP_129S1SvImJ_T0101524.1 MGP_129S1SvImJ_G0039591.1 mouse_genomes_project X 74426107 74426241 - Gm22843 snoRNA snoRNA MGP_129S1SvImJ_T0016418.1 MGP_129S1SvImJ_G0014507.1 mouse_genomes_project X 67150626 67150931 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016611.1 MGP_129S1SvImJ_G0014700.1 mouse_genomes_project X 101691751 101692246 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016911.1 MGP_129S1SvImJ_G0015000.1 mouse_genomes_project X 162981766 162982043 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097191.1 MGP_129S1SvImJ_G0036004.1 mouse_genomes_project X 102978005 102994590 + MGP_129S1SvImJ_P0097191 protein_coding protein_coding MGP_129S1SvImJ_T0097192.1 MGP_129S1SvImJ_G0036004.1 mouse_genomes_project X 102978061 102994552 + MGP_129S1SvImJ_P0097192 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097193.1 MGP_129S1SvImJ_G0036004.1 mouse_genomes_project X 102982511 102985667 + protein_coding retained_intron MGP_129S1SvImJ_T0096241.1 MGP_129S1SvImJ_G0035768.1 mouse_genomes_project X 61895191 61896055 - MGP_129S1SvImJ_P0096241 4930447F04Rik protein_coding protein_coding MGP_129S1SvImJ_T0009433.1 MGP_129S1SvImJ_G0007568.1 mouse_genomes_project X 148017943 148018712 - lincRNA lincRNA MGP_129S1SvImJ_T0009434.1 MGP_129S1SvImJ_G0007568.1 mouse_genomes_project X 148018293 148018707 - lincRNA lincRNA MGP_129S1SvImJ_T0098691.1 MGP_129S1SvImJ_G0036776.1 mouse_genomes_project X 150069766 150069877 + n-R5s15 rRNA rRNA MGP_129S1SvImJ_T0016329.1 MGP_129S1SvImJ_G0014418.1 mouse_genomes_project X 46203727 46204584 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016679.1 MGP_129S1SvImJ_G0014768.1 mouse_genomes_project X 114482432 114483421 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016716.1 MGP_129S1SvImJ_G0014805.1 mouse_genomes_project X 125319522 125320186 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016531.1 MGP_129S1SvImJ_G0014620.1 mouse_genomes_project X 90739341 90740042 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016350.1 MGP_129S1SvImJ_G0014439.1 mouse_genomes_project X 53567292 53567972 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011245.1 MGP_129S1SvImJ_G0009361.1 mouse_genomes_project X 149612481 149612557 + Mir3113 miRNA miRNA MGP_129S1SvImJ_T0095720.1 MGP_129S1SvImJ_G0035581.1 mouse_genomes_project X 11750291 11775771 - MGP_129S1SvImJ_P0095720 Ndp protein_coding protein_coding MGP_129S1SvImJ_T0016229.1 MGP_129S1SvImJ_G0014318.1 mouse_genomes_project X 8238764 8239577 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005612.1 MGP_129S1SvImJ_G0004731.1 mouse_genomes_project X 67089481 67119842 + Gm16189 antisense antisense MGP_129S1SvImJ_T0098770.1 MGP_129S1SvImJ_G0036855.1 mouse_genomes_project X 118209473 118209597 - Gm25825 scaRNA scaRNA MGP_129S1SvImJ_T0101519.1 MGP_129S1SvImJ_G0039586.1 mouse_genomes_project X 70067301 70067438 + Snora70 snoRNA snoRNA MGP_129S1SvImJ_T0096070.1 MGP_129S1SvImJ_G0035700.1 mouse_genomes_project X 44187878 44370228 - MGP_129S1SvImJ_P0096070 Enox2 protein_coding protein_coding MGP_129S1SvImJ_T0096071.1 MGP_129S1SvImJ_G0035700.1 mouse_genomes_project X 44242370 44469273 - Enox2 protein_coding processed_transcript MGP_129S1SvImJ_T0096072.1 MGP_129S1SvImJ_G0035700.1 mouse_genomes_project X 44245587 44469226 - Enox2 protein_coding processed_transcript MGP_129S1SvImJ_T0096073.1 MGP_129S1SvImJ_G0035700.1 mouse_genomes_project X 44249884 44469256 - Enox2 protein_coding processed_transcript MGP_129S1SvImJ_T0016701.1 MGP_129S1SvImJ_G0014790.1 mouse_genomes_project X 118299539 118300186 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095874.1 MGP_129S1SvImJ_G0035629.1 mouse_genomes_project X 31994077 31995651 + MGP_129S1SvImJ_P0095874 Sowahd protein_coding protein_coding MGP_129S1SvImJ_T0011778.1 MGP_129S1SvImJ_G0009894.1 mouse_genomes_project X 64274992 64275120 + Gm27838 misc_RNA misc_RNA MGP_129S1SvImJ_T0016567.1 MGP_129S1SvImJ_G0014656.1 mouse_genomes_project X 97538013 97538296 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016522.1 MGP_129S1SvImJ_G0014611.1 mouse_genomes_project X 90007094 90007365 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101815.1 MGP_129S1SvImJ_G0039777.1 mouse_genomes_project X 147933688 147934658 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0016924.1 MGP_129S1SvImJ_G0015013.1 mouse_genomes_project X 166568866 166569261 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016417.1 MGP_129S1SvImJ_G0014506.1 mouse_genomes_project X 66606526 66607157 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098064.1 MGP_129S1SvImJ_G0036251.1 mouse_genomes_project X 162165216 162196237 + MGP_129S1SvImJ_P0098064 Tmem27 protein_coding protein_coding MGP_129S1SvImJ_T0098065.1 MGP_129S1SvImJ_G0036251.1 mouse_genomes_project X 162166567 162196236 + MGP_129S1SvImJ_P0098065 Tmem27 protein_coding protein_coding MGP_129S1SvImJ_T0098066.1 MGP_129S1SvImJ_G0036251.1 mouse_genomes_project X 162168565 162195591 + MGP_129S1SvImJ_P0098066 Tmem27 protein_coding protein_coding MGP_129S1SvImJ_T0016210.1 MGP_129S1SvImJ_G0014299.1 mouse_genomes_project X 5449157 5449590 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016387.1 MGP_129S1SvImJ_G0014476.1 mouse_genomes_project X 60473078 60473981 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016858.1 MGP_129S1SvImJ_G0014947.1 mouse_genomes_project X 153199663 153201214 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100298.1 MGP_129S1SvImJ_G0038365.1 mouse_genomes_project X 161440445 161440565 - Gm26007 snRNA snRNA MGP_129S1SvImJ_T0096850.1 MGP_129S1SvImJ_G0035912.1 mouse_genomes_project X 90958380 90965050 - MGP_129S1SvImJ_P0096850 Maged1 protein_coding protein_coding MGP_129S1SvImJ_T0096851.1 MGP_129S1SvImJ_G0035912.1 mouse_genomes_project X 90958382 90960742 - Maged1 protein_coding retained_intron MGP_129S1SvImJ_T0096852.1 MGP_129S1SvImJ_G0035912.1 mouse_genomes_project X 90958382 90964897 - Maged1 protein_coding retained_intron MGP_129S1SvImJ_T0096853.1 MGP_129S1SvImJ_G0035912.1 mouse_genomes_project X 90958382 90960471 - Maged1 protein_coding retained_intron MGP_129S1SvImJ_T0096854.1 MGP_129S1SvImJ_G0035912.1 mouse_genomes_project X 90958988 90960791 - Maged1 protein_coding retained_intron MGP_129S1SvImJ_T0096855.1 MGP_129S1SvImJ_G0035912.1 mouse_genomes_project X 90960581 90961733 - Maged1 protein_coding retained_intron MGP_129S1SvImJ_T0096856.1 MGP_129S1SvImJ_G0035912.1 mouse_genomes_project X 90963400 90964910 - Maged1 protein_coding retained_intron MGP_129S1SvImJ_T0097928.1 MGP_129S1SvImJ_G0036222.1 mouse_genomes_project X 155712064 155950830 - MGP_129S1SvImJ_P0097928 Cnksr2 protein_coding protein_coding MGP_129S1SvImJ_T0097929.1 MGP_129S1SvImJ_G0036222.1 mouse_genomes_project X 155723371 155950830 - MGP_129S1SvImJ_P0097929 Cnksr2 protein_coding protein_coding MGP_129S1SvImJ_T0097930.1 MGP_129S1SvImJ_G0036222.1 mouse_genomes_project X 155749581 155757816 - Cnksr2 protein_coding retained_intron MGP_129S1SvImJ_T0095694.1 MGP_129S1SvImJ_G0035572.1 mouse_genomes_project X 8329860 8354165 + MGP_129S1SvImJ_P0095694 Nyx protein_coding protein_coding MGP_129S1SvImJ_T0011238.1 MGP_129S1SvImJ_G0009354.1 mouse_genomes_project X 144608175 144608283 + Mir764 miRNA miRNA MGP_129S1SvImJ_T0005636.1 MGP_129S1SvImJ_G0004749.1 mouse_genomes_project X 158417847 158432935 - Gm15241 antisense antisense MGP_129S1SvImJ_T0097396.1 MGP_129S1SvImJ_G0036075.1 mouse_genomes_project X 131906497 131910402 + MGP_129S1SvImJ_P0097396 Armcx1 protein_coding protein_coding MGP_129S1SvImJ_T0097397.1 MGP_129S1SvImJ_G0036075.1 mouse_genomes_project X 131906504 131910411 + MGP_129S1SvImJ_P0097397 Armcx1 protein_coding protein_coding MGP_129S1SvImJ_T0097398.1 MGP_129S1SvImJ_G0036075.1 mouse_genomes_project X 131906522 131907855 + Armcx1 protein_coding processed_transcript MGP_129S1SvImJ_T0097399.1 MGP_129S1SvImJ_G0036075.1 mouse_genomes_project X 131906522 131910404 + MGP_129S1SvImJ_P0097399 Armcx1 protein_coding protein_coding MGP_129S1SvImJ_T0097400.1 MGP_129S1SvImJ_G0036075.1 mouse_genomes_project X 131906523 131910411 + MGP_129S1SvImJ_P0097400 Armcx1 protein_coding protein_coding MGP_129S1SvImJ_T0097401.1 MGP_129S1SvImJ_G0036075.1 mouse_genomes_project X 131906537 131908049 + Armcx1 protein_coding processed_transcript MGP_129S1SvImJ_T0097402.1 MGP_129S1SvImJ_G0036075.1 mouse_genomes_project X 131906537 131907570 + Armcx1 protein_coding processed_transcript MGP_129S1SvImJ_T0097403.1 MGP_129S1SvImJ_G0036075.1 mouse_genomes_project X 131906547 131910402 + MGP_129S1SvImJ_P0097403 Armcx1 protein_coding protein_coding MGP_129S1SvImJ_T0097404.1 MGP_129S1SvImJ_G0036075.1 mouse_genomes_project X 131906554 131910411 + MGP_129S1SvImJ_P0097404 Armcx1 protein_coding protein_coding MGP_129S1SvImJ_T0097405.1 MGP_129S1SvImJ_G0036075.1 mouse_genomes_project X 131907798 131909009 + Armcx1 protein_coding processed_transcript MGP_129S1SvImJ_T0011240.1 MGP_129S1SvImJ_G0009356.1 mouse_genomes_project X 144628158 144628244 + Mir1264 miRNA miRNA MGP_129S1SvImJ_T0016648.1 MGP_129S1SvImJ_G0014737.1 mouse_genomes_project X 109067133 109067405 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016867.1 MGP_129S1SvImJ_G0014956.1 mouse_genomes_project X 155261980 155263026 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016669.1 MGP_129S1SvImJ_G0014758.1 mouse_genomes_project X 112236738 112237371 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096918.1 MGP_129S1SvImJ_G0035932.1 mouse_genomes_project X 94944031 95295790 - MGP_129S1SvImJ_P0096918 Ophn1 protein_coding protein_coding MGP_129S1SvImJ_T0096919.1 MGP_129S1SvImJ_G0035932.1 mouse_genomes_project X 94948005 95295586 - MGP_129S1SvImJ_P0096919 Ophn1 protein_coding protein_coding MGP_129S1SvImJ_T0096920.1 MGP_129S1SvImJ_G0035932.1 mouse_genomes_project X 94948011 94968233 - MGP_129S1SvImJ_P0096920 Ophn1 protein_coding protein_coding MGP_129S1SvImJ_T0096921.1 MGP_129S1SvImJ_G0035932.1 mouse_genomes_project X 94953323 94968179 - Ophn1 protein_coding processed_transcript MGP_129S1SvImJ_T0096922.1 MGP_129S1SvImJ_G0035932.1 mouse_genomes_project X 95112525 95295830 - Ophn1 protein_coding retained_intron MGP_129S1SvImJ_T0096923.1 MGP_129S1SvImJ_G0035932.1 mouse_genomes_project X 95112753 95295790 - Ophn1 protein_coding retained_intron MGP_129S1SvImJ_T0096924.1 MGP_129S1SvImJ_G0035932.1 mouse_genomes_project X 95136037 95295790 - MGP_129S1SvImJ_P0096924 Ophn1 protein_coding protein_coding MGP_129S1SvImJ_T0096925.1 MGP_129S1SvImJ_G0035932.1 mouse_genomes_project X 95204896 95295414 - Ophn1 protein_coding retained_intron MGP_129S1SvImJ_T0096926.1 MGP_129S1SvImJ_G0035932.1 mouse_genomes_project X 95279077 95295189 - Ophn1 protein_coding processed_transcript MGP_129S1SvImJ_T0096927.1 MGP_129S1SvImJ_G0035932.1 mouse_genomes_project X 95292584 95295430 - Ophn1 protein_coding retained_intron MGP_129S1SvImJ_T0016599.1 MGP_129S1SvImJ_G0014688.1 mouse_genomes_project X 100263677 100264243 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096861.1 MGP_129S1SvImJ_G0035916.1 mouse_genomes_project X 91393742 91559880 - MGP_129S1SvImJ_P0096861 Arhgef9 protein_coding protein_coding MGP_129S1SvImJ_T0096862.1 MGP_129S1SvImJ_G0035916.1 mouse_genomes_project X 91393745 91528253 - MGP_129S1SvImJ_P0096862 Arhgef9 protein_coding protein_coding MGP_129S1SvImJ_T0096863.1 MGP_129S1SvImJ_G0035916.1 mouse_genomes_project X 91393751 91528355 - MGP_129S1SvImJ_P0096863 Arhgef9 protein_coding protein_coding MGP_129S1SvImJ_T0096864.1 MGP_129S1SvImJ_G0035916.1 mouse_genomes_project X 91394984 91559883 - MGP_129S1SvImJ_P0096864 Arhgef9 protein_coding protein_coding MGP_129S1SvImJ_T0096865.1 MGP_129S1SvImJ_G0035916.1 mouse_genomes_project X 91395073 91560211 - MGP_129S1SvImJ_P0096865 Arhgef9 protein_coding protein_coding MGP_129S1SvImJ_T0096866.1 MGP_129S1SvImJ_G0035916.1 mouse_genomes_project X 91396331 91560199 - MGP_129S1SvImJ_P0096866 Arhgef9 protein_coding protein_coding MGP_129S1SvImJ_T0096867.1 MGP_129S1SvImJ_G0035916.1 mouse_genomes_project X 91396362 91560234 - MGP_129S1SvImJ_P0096867 Arhgef9 protein_coding protein_coding MGP_129S1SvImJ_T0096868.1 MGP_129S1SvImJ_G0035916.1 mouse_genomes_project X 91396411 91439246 - MGP_129S1SvImJ_P0096868 Arhgef9 protein_coding protein_coding MGP_129S1SvImJ_T0096869.1 MGP_129S1SvImJ_G0035916.1 mouse_genomes_project X 91396727 91413009 - MGP_129S1SvImJ_P0096869 Arhgef9 protein_coding protein_coding MGP_129S1SvImJ_T0096870.1 MGP_129S1SvImJ_G0035916.1 mouse_genomes_project X 91396780 91527466 - MGP_129S1SvImJ_P0096870 Arhgef9 protein_coding protein_coding MGP_129S1SvImJ_T0096871.1 MGP_129S1SvImJ_G0035916.1 mouse_genomes_project X 91398860 91491202 - MGP_129S1SvImJ_P0096871 Arhgef9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0096872.1 MGP_129S1SvImJ_G0035916.1 mouse_genomes_project X 91432006 91527694 - MGP_129S1SvImJ_P0096872 Arhgef9 protein_coding protein_coding MGP_129S1SvImJ_T0096873.1 MGP_129S1SvImJ_G0035916.1 mouse_genomes_project X 91439166 91559830 - MGP_129S1SvImJ_P0096873 Arhgef9 protein_coding protein_coding MGP_129S1SvImJ_T0096874.1 MGP_129S1SvImJ_G0035916.1 mouse_genomes_project X 91461178 91528408 - MGP_129S1SvImJ_P0096874 Arhgef9 protein_coding protein_coding MGP_129S1SvImJ_T0096875.1 MGP_129S1SvImJ_G0035916.1 mouse_genomes_project X 91472503 91528307 - MGP_129S1SvImJ_P0096875 Arhgef9 protein_coding protein_coding MGP_129S1SvImJ_T0016303.1 MGP_129S1SvImJ_G0014392.1 mouse_genomes_project X 38481344 38482002 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096231.1 MGP_129S1SvImJ_G0035762.1 mouse_genomes_project X 57689661 57698979 + MGP_129S1SvImJ_P0096231 4933402E13Rik protein_coding protein_coding MGP_129S1SvImJ_T0096232.1 MGP_129S1SvImJ_G0035762.1 mouse_genomes_project X 57694042 57698979 + MGP_129S1SvImJ_P0096232 4933402E13Rik protein_coding protein_coding MGP_129S1SvImJ_T0016406.1 MGP_129S1SvImJ_G0014495.1 mouse_genomes_project X 64529899 64530755 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095934.1 MGP_129S1SvImJ_G0035666.1 mouse_genomes_project X 33499277 33545335 - MGP_129S1SvImJ_P0095934 Cul4b protein_coding protein_coding MGP_129S1SvImJ_T0095935.1 MGP_129S1SvImJ_G0035666.1 mouse_genomes_project X 33499277 33533332 - MGP_129S1SvImJ_P0095935 Cul4b protein_coding protein_coding MGP_129S1SvImJ_T0095936.1 MGP_129S1SvImJ_G0035666.1 mouse_genomes_project X 33499573 33533469 - MGP_129S1SvImJ_P0095936 Cul4b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095937.1 MGP_129S1SvImJ_G0035666.1 mouse_genomes_project X 33499577 33545322 - MGP_129S1SvImJ_P0095937 Cul4b protein_coding protein_coding MGP_129S1SvImJ_T0102862.1 MGP_129S1SvImJ_G0040694.1 mouse_genomes_project X 82465797 82466820 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0005595.1 MGP_129S1SvImJ_G0004717.1 mouse_genomes_project X 2792062 2794596 + Rbm3os antisense antisense MGP_129S1SvImJ_T0005596.1 MGP_129S1SvImJ_G0004717.1 mouse_genomes_project X 2792548 2794308 + Rbm3os antisense antisense MGP_129S1SvImJ_T0016242.1 MGP_129S1SvImJ_G0014331.1 mouse_genomes_project X 12545312 12547167 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097684.1 MGP_129S1SvImJ_G0036163.1 mouse_genomes_project X 144566592 144696208 + Htr2c protein_coding retained_intron MGP_129S1SvImJ_T0097685.1 MGP_129S1SvImJ_G0036163.1 mouse_genomes_project X 144566592 144594018 + Htr2c protein_coding retained_intron MGP_129S1SvImJ_T0097686.1 MGP_129S1SvImJ_G0036163.1 mouse_genomes_project X 144566709 144690671 + Htr2c protein_coding processed_transcript MGP_129S1SvImJ_T0097687.1 MGP_129S1SvImJ_G0036163.1 mouse_genomes_project X 144567102 144798105 + MGP_129S1SvImJ_P0097687 Htr2c protein_coding protein_coding MGP_129S1SvImJ_T0097688.1 MGP_129S1SvImJ_G0036163.1 mouse_genomes_project X 144686847 144815594 + MGP_129S1SvImJ_P0097688 Htr2c protein_coding protein_coding MGP_129S1SvImJ_T0096270.1 MGP_129S1SvImJ_G0035779.1 mouse_genomes_project X 66087948 66106368 - MGP_129S1SvImJ_P0096270 Tmem185a protein_coding protein_coding MGP_129S1SvImJ_T0096271.1 MGP_129S1SvImJ_G0035779.1 mouse_genomes_project X 66089154 66106368 - MGP_129S1SvImJ_P0096271 Tmem185a protein_coding protein_coding MGP_129S1SvImJ_T0096272.1 MGP_129S1SvImJ_G0035779.1 mouse_genomes_project X 66089249 66099367 - Tmem185a protein_coding processed_transcript MGP_129S1SvImJ_T0096273.1 MGP_129S1SvImJ_G0035779.1 mouse_genomes_project X 66091118 66106330 - Tmem185a protein_coding processed_transcript MGP_129S1SvImJ_T0016318.1 MGP_129S1SvImJ_G0014407.1 mouse_genomes_project X 42504771 42505737 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097608.1 MGP_129S1SvImJ_G0036140.1 mouse_genomes_project X 138534561 138571541 + Atg4a protein_coding processed_transcript MGP_129S1SvImJ_T0097609.1 MGP_129S1SvImJ_G0036140.1 mouse_genomes_project X 138534573 138632501 + MGP_129S1SvImJ_P0097609 Atg4a protein_coding protein_coding MGP_129S1SvImJ_T0097611.1 MGP_129S1SvImJ_G0036140.1 mouse_genomes_project X 138630393 138631754 + Atg4a protein_coding retained_intron MGP_129S1SvImJ_T0096661.1 MGP_129S1SvImJ_G0035850.1 mouse_genomes_project X 70405622 70406570 + MGP_129S1SvImJ_P0096661 Olfr1325 protein_coding protein_coding MGP_129S1SvImJ_T0016720.1 MGP_129S1SvImJ_G0014809.1 mouse_genomes_project X 127491238 127492498 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097971.1 MGP_129S1SvImJ_G0036230.1 mouse_genomes_project X 158316391 158431135 + MGP_129S1SvImJ_P0097971 Adgrg2 protein_coding protein_coding MGP_129S1SvImJ_T0097972.1 MGP_129S1SvImJ_G0036230.1 mouse_genomes_project X 158316425 158431135 + MGP_129S1SvImJ_P0097972 Adgrg2 protein_coding protein_coding MGP_129S1SvImJ_T0097973.1 MGP_129S1SvImJ_G0036230.1 mouse_genomes_project X 158316425 158431135 + MGP_129S1SvImJ_P0097973 Adgrg2 protein_coding protein_coding MGP_129S1SvImJ_T0097974.1 MGP_129S1SvImJ_G0036230.1 mouse_genomes_project X 158316426 158431135 + MGP_129S1SvImJ_P0097974 Adgrg2 protein_coding protein_coding MGP_129S1SvImJ_T0097975.1 MGP_129S1SvImJ_G0036230.1 mouse_genomes_project X 158316426 158431135 + MGP_129S1SvImJ_P0097975 Adgrg2 protein_coding protein_coding MGP_129S1SvImJ_T0097976.1 MGP_129S1SvImJ_G0036230.1 mouse_genomes_project X 158316426 158431135 + MGP_129S1SvImJ_P0097976 Adgrg2 protein_coding protein_coding MGP_129S1SvImJ_T0097977.1 MGP_129S1SvImJ_G0036230.1 mouse_genomes_project X 158316429 158388775 + Adgrg2 protein_coding retained_intron MGP_129S1SvImJ_T0097978.1 MGP_129S1SvImJ_G0036230.1 mouse_genomes_project X 158316429 158396769 + MGP_129S1SvImJ_P0097978 Adgrg2 protein_coding protein_coding MGP_129S1SvImJ_T0097979.1 MGP_129S1SvImJ_G0036230.1 mouse_genomes_project X 158354015 158429803 + MGP_129S1SvImJ_P0097979 Adgrg2 protein_coding protein_coding MGP_129S1SvImJ_T0011187.1 MGP_129S1SvImJ_G0009303.1 mouse_genomes_project X 62378748 62378826 - Mir878 miRNA miRNA MGP_129S1SvImJ_T0097236.1 MGP_129S1SvImJ_G0036018.1 mouse_genomes_project X 104804986 104807688 - MGP_129S1SvImJ_P0097236 Gm732 protein_coding protein_coding MGP_129S1SvImJ_T0097237.1 MGP_129S1SvImJ_G0036018.1 mouse_genomes_project X 104806127 104807717 - MGP_129S1SvImJ_P0097237 Gm732 protein_coding protein_coding MGP_129S1SvImJ_T0011162.1 MGP_129S1SvImJ_G0009278.1 mouse_genomes_project X 47958172 47958256 - Mir19b-2 miRNA miRNA MGP_129S1SvImJ_T0016503.1 MGP_129S1SvImJ_G0014592.1 mouse_genomes_project X 85694045 85694766 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016194.1 MGP_129S1SvImJ_G0014283.1 mouse_genomes_project X 2675616 2676002 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016419.1 MGP_129S1SvImJ_G0014508.1 mouse_genomes_project X 67387862 67388077 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016687.1 MGP_129S1SvImJ_G0014776.1 mouse_genomes_project X 115083718 115085523 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016882.1 MGP_129S1SvImJ_G0014971.1 mouse_genomes_project X 156723068 156723953 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097525.1 MGP_129S1SvImJ_G0036114.1 mouse_genomes_project X 134544282 134550670 - MGP_129S1SvImJ_P0097525 Esx1 protein_coding protein_coding MGP_129S1SvImJ_T0097526.1 MGP_129S1SvImJ_G0036114.1 mouse_genomes_project X 134544282 134550515 - MGP_129S1SvImJ_P0097526 Esx1 protein_coding protein_coding MGP_129S1SvImJ_T0097527.1 MGP_129S1SvImJ_G0036114.1 mouse_genomes_project X 134548029 134552399 - MGP_129S1SvImJ_P0097527 Esx1 protein_coding protein_coding MGP_129S1SvImJ_T0095818.1 MGP_129S1SvImJ_G0035611.1 mouse_genomes_project X 18095741 18162170 - MGP_129S1SvImJ_P0095818 Klhl13 protein_coding protein_coding MGP_129S1SvImJ_T0095819.1 MGP_129S1SvImJ_G0035611.1 mouse_genomes_project X 18095749 18163072 - MGP_129S1SvImJ_P0095819 Klhl13 protein_coding protein_coding MGP_129S1SvImJ_T0095820.1 MGP_129S1SvImJ_G0035611.1 mouse_genomes_project X 18095750 18197996 - MGP_129S1SvImJ_P0095820 Klhl13 protein_coding protein_coding MGP_129S1SvImJ_T0095821.1 MGP_129S1SvImJ_G0035611.1 mouse_genomes_project X 18095750 18142863 - MGP_129S1SvImJ_P0095821 Klhl13 protein_coding protein_coding MGP_129S1SvImJ_T0095822.1 MGP_129S1SvImJ_G0035611.1 mouse_genomes_project X 18112209 18173672 - Klhl13 protein_coding processed_transcript MGP_129S1SvImJ_T0005615.1 MGP_129S1SvImJ_G0004734.1 mouse_genomes_project X 71424852 71426671 + Gm15063 antisense antisense MGP_129S1SvImJ_T0096738.1 MGP_129S1SvImJ_G0035875.1 mouse_genomes_project X 73975715 73980870 + MGP_129S1SvImJ_P0096738 Gm5938 protein_coding protein_coding MGP_129S1SvImJ_T0096739.1 MGP_129S1SvImJ_G0035875.1 mouse_genomes_project X 73977080 73979937 + Gm5938 protein_coding retained_intron MGP_129S1SvImJ_T0016430.1 MGP_129S1SvImJ_G0014519.1 mouse_genomes_project X 70446060 70448589 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016837.1 MGP_129S1SvImJ_G0014926.1 mouse_genomes_project X 148901707 148902092 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095431.1 MGP_129S1SvImJ_G0035508.1 mouse_genomes_project X 1650524 1660933 + MGP_129S1SvImJ_P0095431 Akap4 protein_coding protein_coding MGP_129S1SvImJ_T0095432.1 MGP_129S1SvImJ_G0035508.1 mouse_genomes_project X 1650525 1660928 + MGP_129S1SvImJ_P0095432 Akap4 protein_coding protein_coding MGP_129S1SvImJ_T0095433.1 MGP_129S1SvImJ_G0035508.1 mouse_genomes_project X 1651218 1660915 + MGP_129S1SvImJ_P0095433 Akap4 protein_coding protein_coding MGP_129S1SvImJ_T0005627.1 MGP_129S1SvImJ_G0004745.1 mouse_genomes_project X 142017373 142039714 + antisense antisense MGP_129S1SvImJ_T0005628.1 MGP_129S1SvImJ_G0004745.1 mouse_genomes_project X 142032755 142039711 + antisense antisense MGP_129S1SvImJ_T0095558.1 MGP_129S1SvImJ_G0035532.1 mouse_genomes_project X 2536002 2536388 + MGP_129S1SvImJ_P0095558 protein_coding protein_coding MGP_129S1SvImJ_T0011791.1 MGP_129S1SvImJ_G0009907.1 mouse_genomes_project X 124407135 124407410 + Gm22636 misc_RNA misc_RNA MGP_129S1SvImJ_T0096207.1 MGP_129S1SvImJ_G0035754.1 mouse_genomes_project X 54406792 54518046 - MGP_129S1SvImJ_P0096207 Fgf13 protein_coding protein_coding MGP_129S1SvImJ_T0096208.1 MGP_129S1SvImJ_G0035754.1 mouse_genomes_project X 54406792 54484450 - MGP_129S1SvImJ_P0096208 Fgf13 protein_coding protein_coding MGP_129S1SvImJ_T0096209.1 MGP_129S1SvImJ_G0035754.1 mouse_genomes_project X 54406792 54926109 - MGP_129S1SvImJ_P0096209 Fgf13 protein_coding protein_coding MGP_129S1SvImJ_T0096210.1 MGP_129S1SvImJ_G0035754.1 mouse_genomes_project X 54408165 54483229 - Fgf13 protein_coding processed_transcript MGP_129S1SvImJ_T0096211.1 MGP_129S1SvImJ_G0035754.1 mouse_genomes_project X 54480509 54483177 - Fgf13 protein_coding processed_transcript MGP_129S1SvImJ_T0096212.1 MGP_129S1SvImJ_G0035754.1 mouse_genomes_project X 54480512 54925510 - MGP_129S1SvImJ_P0096212 Fgf13 protein_coding protein_coding MGP_129S1SvImJ_T0096213.1 MGP_129S1SvImJ_G0035754.1 mouse_genomes_project X 54606987 54926109 - MGP_129S1SvImJ_P0096213 Fgf13 protein_coding protein_coding MGP_129S1SvImJ_T0096214.1 MGP_129S1SvImJ_G0035754.1 mouse_genomes_project X 54607064 54925859 - MGP_129S1SvImJ_P0096214 Fgf13 protein_coding protein_coding MGP_129S1SvImJ_T0096215.1 MGP_129S1SvImJ_G0035754.1 mouse_genomes_project X 54924851 54926086 - Fgf13 protein_coding retained_intron MGP_129S1SvImJ_T0016656.1 MGP_129S1SvImJ_G0014745.1 mouse_genomes_project X 109708757 109708965 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009399.1 MGP_129S1SvImJ_G0007547.1 mouse_genomes_project X 87418762 87419386 + Gm14773 lincRNA lincRNA MGP_129S1SvImJ_T0016225.1 MGP_129S1SvImJ_G0014314.1 mouse_genomes_project X 7786980 7787337 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097300.1 MGP_129S1SvImJ_G0036041.1 mouse_genomes_project X 113243443 113266729 + MGP_129S1SvImJ_P0097300 Cpxcr1 protein_coding protein_coding MGP_129S1SvImJ_T0096913.1 MGP_129S1SvImJ_G0035930.1 mouse_genomes_project X 93728325 93770469 - MGP_129S1SvImJ_P0096913 Eda2r protein_coding protein_coding MGP_129S1SvImJ_T0096914.1 MGP_129S1SvImJ_G0035930.1 mouse_genomes_project X 93731623 93770403 - MGP_129S1SvImJ_P0096914 Eda2r protein_coding protein_coding MGP_129S1SvImJ_T0096915.1 MGP_129S1SvImJ_G0035930.1 mouse_genomes_project X 93732276 93770469 - Eda2r protein_coding retained_intron MGP_129S1SvImJ_T0096916.1 MGP_129S1SvImJ_G0035930.1 mouse_genomes_project X 93734703 93770425 - Eda2r protein_coding retained_intron MGP_129S1SvImJ_T0095626.1 MGP_129S1SvImJ_G0035549.1 mouse_genomes_project X 3716231 3717078 + MGP_129S1SvImJ_P0095626 protein_coding protein_coding MGP_129S1SvImJ_T0011236.1 MGP_129S1SvImJ_G0009352.1 mouse_genomes_project X 141391964 141392095 - miRNA miRNA MGP_129S1SvImJ_T0095831.1 MGP_129S1SvImJ_G0035615.1 mouse_genomes_project X 30778241 30967229 + MGP_129S1SvImJ_P0095831 Dock11 protein_coding protein_coding MGP_129S1SvImJ_T0095832.1 MGP_129S1SvImJ_G0035615.1 mouse_genomes_project X 30832518 30967223 + MGP_129S1SvImJ_P0095832 Dock11 protein_coding protein_coding MGP_129S1SvImJ_T0095833.1 MGP_129S1SvImJ_G0035615.1 mouse_genomes_project X 30861834 30871291 + Dock11 protein_coding retained_intron MGP_129S1SvImJ_T0095834.1 MGP_129S1SvImJ_G0035615.1 mouse_genomes_project X 30900687 30907224 + Dock11 protein_coding retained_intron MGP_129S1SvImJ_T0095835.1 MGP_129S1SvImJ_G0035615.1 mouse_genomes_project X 30931327 30966894 + MGP_129S1SvImJ_P0095835 Dock11 protein_coding protein_coding MGP_129S1SvImJ_T0016484.1 MGP_129S1SvImJ_G0014573.1 mouse_genomes_project X 82436744 82439506 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096356.1 MGP_129S1SvImJ_G0035809.1 mouse_genomes_project X 69181194 69182834 - MGP_129S1SvImJ_P0096356 Trex2 protein_coding protein_coding MGP_129S1SvImJ_T0016889.1 MGP_129S1SvImJ_G0014978.1 mouse_genomes_project X 157950061 157950559 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097994.1 MGP_129S1SvImJ_G0036234.1 mouse_genomes_project X 158700042 158864756 - MGP_129S1SvImJ_P0097994 Cdkl5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097995.1 MGP_129S1SvImJ_G0036234.1 mouse_genomes_project X 158700042 158864723 - MGP_129S1SvImJ_P0097995 Cdkl5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097996.1 MGP_129S1SvImJ_G0036234.1 mouse_genomes_project X 158715346 158930689 - MGP_129S1SvImJ_P0097996 Cdkl5 protein_coding protein_coding MGP_129S1SvImJ_T0097998.1 MGP_129S1SvImJ_G0036234.1 mouse_genomes_project X 158730191 158748224 - Cdkl5 protein_coding processed_transcript MGP_129S1SvImJ_T0097999.1 MGP_129S1SvImJ_G0036234.1 mouse_genomes_project X 158732433 158864723 - MGP_129S1SvImJ_P0097999 Cdkl5 protein_coding protein_coding MGP_129S1SvImJ_T0098000.1 MGP_129S1SvImJ_G0036234.1 mouse_genomes_project X 158779557 158783113 - Cdkl5 protein_coding retained_intron MGP_129S1SvImJ_T0016216.1 MGP_129S1SvImJ_G0014305.1 mouse_genomes_project X 6645475 6645916 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011243.1 MGP_129S1SvImJ_G0009359.1 mouse_genomes_project X 144772656 144772768 + Mir448 miRNA miRNA MGP_129S1SvImJ_T0095915.1 MGP_129S1SvImJ_G0035660.1 mouse_genomes_project X 33043781 33050920 - MGP_129S1SvImJ_P0095915 Rhox12 protein_coding protein_coding MGP_129S1SvImJ_T0095916.1 MGP_129S1SvImJ_G0035660.1 mouse_genomes_project X 33043882 33048513 - MGP_129S1SvImJ_P0095916 Rhox12 protein_coding protein_coding MGP_129S1SvImJ_T0095917.1 MGP_129S1SvImJ_G0035660.1 mouse_genomes_project X 33045281 33050800 - MGP_129S1SvImJ_P0095917 Rhox12 protein_coding protein_coding MGP_129S1SvImJ_T0095886.1 MGP_129S1SvImJ_G0035636.1 mouse_genomes_project X 32161226 32162920 - MGP_129S1SvImJ_P0095886 Gm9 protein_coding protein_coding MGP_129S1SvImJ_T0011195.1 MGP_129S1SvImJ_G0009311.1 mouse_genomes_project X 63593312 63593378 - Mir201 miRNA miRNA MGP_129S1SvImJ_T0095823.1 MGP_129S1SvImJ_G0035612.1 mouse_genomes_project X 18563309 18681203 + MGP_129S1SvImJ_P0095823 Wdr44 protein_coding protein_coding MGP_129S1SvImJ_T0095824.1 MGP_129S1SvImJ_G0035612.1 mouse_genomes_project X 18563335 18628452 + Wdr44 protein_coding retained_intron MGP_129S1SvImJ_T0095825.1 MGP_129S1SvImJ_G0035612.1 mouse_genomes_project X 18563354 18681238 + MGP_129S1SvImJ_P0095825 Wdr44 protein_coding protein_coding MGP_129S1SvImJ_T0095826.1 MGP_129S1SvImJ_G0035612.1 mouse_genomes_project X 18563417 18633782 + MGP_129S1SvImJ_P0095826 Wdr44 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095827.1 MGP_129S1SvImJ_G0035612.1 mouse_genomes_project X 18651276 18655997 + Wdr44 protein_coding retained_intron MGP_129S1SvImJ_T0097456.1 MGP_129S1SvImJ_G0036094.1 mouse_genomes_project X 133539514 133542823 - MGP_129S1SvImJ_P0097456 Tceal8 protein_coding protein_coding MGP_129S1SvImJ_T0097457.1 MGP_129S1SvImJ_G0036094.1 mouse_genomes_project X 133540611 133542914 - MGP_129S1SvImJ_P0097457 Tceal8 protein_coding protein_coding MGP_129S1SvImJ_T0097458.1 MGP_129S1SvImJ_G0036094.1 mouse_genomes_project X 133541415 133542788 - MGP_129S1SvImJ_P0097458 Tceal8 protein_coding protein_coding MGP_129S1SvImJ_T0097459.1 MGP_129S1SvImJ_G0036094.1 mouse_genomes_project X 133541519 133542773 - MGP_129S1SvImJ_P0097459 Tceal8 protein_coding protein_coding MGP_129S1SvImJ_T0096185.1 MGP_129S1SvImJ_G0035746.1 mouse_genomes_project X 52538282 52549797 + MGP_129S1SvImJ_P0096185 Cd40lg protein_coding protein_coding MGP_129S1SvImJ_T0096828.1 MGP_129S1SvImJ_G0035907.1 mouse_genomes_project X 90460728 90510329 - MGP_129S1SvImJ_P0096828 Zfx protein_coding protein_coding MGP_129S1SvImJ_T0096829.1 MGP_129S1SvImJ_G0035907.1 mouse_genomes_project X 90468100 90510297 - MGP_129S1SvImJ_P0096829 Zfx protein_coding protein_coding MGP_129S1SvImJ_T0096830.1 MGP_129S1SvImJ_G0035907.1 mouse_genomes_project X 90485164 90510031 - MGP_129S1SvImJ_P0096830 Zfx protein_coding protein_coding MGP_129S1SvImJ_T0096831.1 MGP_129S1SvImJ_G0035907.1 mouse_genomes_project X 90485662 90510604 - Zfx protein_coding processed_transcript MGP_129S1SvImJ_T0096832.1 MGP_129S1SvImJ_G0035907.1 mouse_genomes_project X 90500821 90510054 - Zfx protein_coding retained_intron MGP_129S1SvImJ_T0016346.1 MGP_129S1SvImJ_G0014435.1 mouse_genomes_project X 53074191 53076199 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011197.1 MGP_129S1SvImJ_G0009313.1 mouse_genomes_project X 63613837 63613912 - Mir509 miRNA miRNA MGP_129S1SvImJ_T0016293.1 MGP_129S1SvImJ_G0014382.1 mouse_genomes_project X 35961168 35962279 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095539.1 MGP_129S1SvImJ_G0035527.1 mouse_genomes_project X 2499127 2501188 + Pim2 protein_coding retained_intron MGP_129S1SvImJ_T0095540.1 MGP_129S1SvImJ_G0035527.1 mouse_genomes_project X 2499167 2506104 + MGP_129S1SvImJ_P0095540 Pim2 protein_coding protein_coding MGP_129S1SvImJ_T0095541.1 MGP_129S1SvImJ_G0035527.1 mouse_genomes_project X 2499171 2506100 + MGP_129S1SvImJ_P0095541 Pim2 protein_coding protein_coding MGP_129S1SvImJ_T0095542.1 MGP_129S1SvImJ_G0035527.1 mouse_genomes_project X 2499483 2502268 + Pim2 protein_coding processed_transcript MGP_129S1SvImJ_T0097674.1 MGP_129S1SvImJ_G0036159.1 mouse_genomes_project X 141936646 142248630 - MGP_129S1SvImJ_P0097674 Trpc5 protein_coding protein_coding MGP_129S1SvImJ_T0097675.1 MGP_129S1SvImJ_G0036159.1 mouse_genomes_project X 141979121 142248453 - Trpc5 protein_coding retained_intron MGP_129S1SvImJ_T0016422.1 MGP_129S1SvImJ_G0014511.1 mouse_genomes_project X 69138188 69140997 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100262.1 MGP_129S1SvImJ_G0038329.1 mouse_genomes_project X 97484022 97484086 + Gm27510 snRNA snRNA MGP_129S1SvImJ_T0011176.1 MGP_129S1SvImJ_G0009292.1 mouse_genomes_project X 55761580 55761670 - Mir505 miRNA miRNA MGP_129S1SvImJ_T0009444.1 MGP_129S1SvImJ_G0007572.1 mouse_genomes_project X 159244683 159265809 + lincRNA lincRNA MGP_129S1SvImJ_T0097443.1 MGP_129S1SvImJ_G0036090.1 mouse_genomes_project X 133088004 133092594 + MGP_129S1SvImJ_P0097443 Armcx5 protein_coding protein_coding MGP_129S1SvImJ_T0097448.1 MGP_129S1SvImJ_G0036090.1 mouse_genomes_project X 133088006 133090678 + Armcx5 protein_coding retained_intron MGP_129S1SvImJ_T0016253.1 MGP_129S1SvImJ_G0014342.1 mouse_genomes_project X 15268528 15270512 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018676.1 MGP_129S1SvImJ_G0015787.1 mouse_genomes_project X 98838206 98960979 + Gm14858 processed_transcript processed_transcript MGP_129S1SvImJ_T0018677.1 MGP_129S1SvImJ_G0015787.1 mouse_genomes_project X 98838335 98845201 + Gm14858 processed_transcript processed_transcript MGP_129S1SvImJ_T0101509.1 MGP_129S1SvImJ_G0039576.1 mouse_genomes_project X 32029971 32030102 - Snora69 snoRNA snoRNA MGP_129S1SvImJ_T0016192.1 MGP_129S1SvImJ_G0014281.1 mouse_genomes_project X 2579085 2579798 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016207.1 MGP_129S1SvImJ_G0014296.1 mouse_genomes_project X 4062390 4062763 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016696.1 MGP_129S1SvImJ_G0014785.1 mouse_genomes_project X 117257718 117258172 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097317.1 MGP_129S1SvImJ_G0036049.1 mouse_genomes_project X 124034450 124059180 + MGP_129S1SvImJ_P0097317 Gm382 protein_coding protein_coding MGP_129S1SvImJ_T0097011.1 MGP_129S1SvImJ_G0035954.1 mouse_genomes_project X 97760676 97763276 - Gm614 protein_coding processed_transcript MGP_129S1SvImJ_T0097012.1 MGP_129S1SvImJ_G0035954.1 mouse_genomes_project X 97760676 97763293 - MGP_129S1SvImJ_P0097012 Gm614 protein_coding protein_coding MGP_129S1SvImJ_T0011136.1 MGP_129S1SvImJ_G0009252.1 mouse_genomes_project X 680593 680673 + Gm27360 miRNA miRNA MGP_129S1SvImJ_T0009431.1 MGP_129S1SvImJ_G0007566.1 mouse_genomes_project X 138346096 138367437 + Eif2c5 lincRNA lincRNA MGP_129S1SvImJ_T0016587.1 MGP_129S1SvImJ_G0014676.1 mouse_genomes_project X 99704509 99704715 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102875.1 MGP_129S1SvImJ_G0040707.1 mouse_genomes_project X 133071985 133074462 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0096724.1 MGP_129S1SvImJ_G0035865.1 mouse_genomes_project X 72146985 72150460 + MGP_129S1SvImJ_P0096724 protein_coding protein_coding MGP_129S1SvImJ_T0016234.1 MGP_129S1SvImJ_G0014323.1 mouse_genomes_project X 10252442 10252754 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096246.1 MGP_129S1SvImJ_G0035772.1 mouse_genomes_project X 64275048 64317042 + MGP_129S1SvImJ_P0096246 Fmr1 protein_coding protein_coding MGP_129S1SvImJ_T0096247.1 MGP_129S1SvImJ_G0035772.1 mouse_genomes_project X 64275089 64306096 + Fmr1 protein_coding retained_intron MGP_129S1SvImJ_T0096248.1 MGP_129S1SvImJ_G0035772.1 mouse_genomes_project X 64275089 64307956 + Fmr1 protein_coding retained_intron MGP_129S1SvImJ_T0096249.1 MGP_129S1SvImJ_G0035772.1 mouse_genomes_project X 64275089 64276593 + Fmr1 protein_coding processed_transcript MGP_129S1SvImJ_T0096250.1 MGP_129S1SvImJ_G0035772.1 mouse_genomes_project X 64275131 64317042 + MGP_129S1SvImJ_P0096250 Fmr1 protein_coding protein_coding MGP_129S1SvImJ_T0096251.1 MGP_129S1SvImJ_G0035772.1 mouse_genomes_project X 64275309 64317042 + MGP_129S1SvImJ_P0096251 Fmr1 protein_coding protein_coding MGP_129S1SvImJ_T0096252.1 MGP_129S1SvImJ_G0035772.1 mouse_genomes_project X 64275309 64317042 + MGP_129S1SvImJ_P0096252 Fmr1 protein_coding protein_coding MGP_129S1SvImJ_T0096253.1 MGP_129S1SvImJ_G0035772.1 mouse_genomes_project X 64275318 64317042 + MGP_129S1SvImJ_P0096253 Fmr1 protein_coding protein_coding MGP_129S1SvImJ_T0096254.1 MGP_129S1SvImJ_G0035772.1 mouse_genomes_project X 64275324 64317042 + MGP_129S1SvImJ_P0096254 Fmr1 protein_coding protein_coding MGP_129S1SvImJ_T0096255.1 MGP_129S1SvImJ_G0035772.1 mouse_genomes_project X 64294000 64305393 + Fmr1 protein_coding retained_intron MGP_129S1SvImJ_T0096256.1 MGP_129S1SvImJ_G0035772.1 mouse_genomes_project X 64296864 64297538 + Fmr1 protein_coding retained_intron MGP_129S1SvImJ_T0096257.1 MGP_129S1SvImJ_G0035772.1 mouse_genomes_project X 64310929 64312402 + Fmr1 protein_coding retained_intron MGP_129S1SvImJ_T0097497.1 MGP_129S1SvImJ_G0036105.1 mouse_genomes_project X 134234644 134251366 + MGP_129S1SvImJ_P0097497 Plp1 protein_coding protein_coding MGP_129S1SvImJ_T0097498.1 MGP_129S1SvImJ_G0036105.1 mouse_genomes_project X 134234763 134249444 + MGP_129S1SvImJ_P0097498 Plp1 protein_coding protein_coding MGP_129S1SvImJ_T0097499.1 MGP_129S1SvImJ_G0036105.1 mouse_genomes_project X 134243106 134244537 + Plp1 protein_coding retained_intron MGP_129S1SvImJ_T0097500.1 MGP_129S1SvImJ_G0036105.1 mouse_genomes_project X 134245195 134246420 + Plp1 protein_coding retained_intron MGP_129S1SvImJ_T0011181.1 MGP_129S1SvImJ_G0009297.1 mouse_genomes_project X 62355039 62355115 - Mir883a miRNA miRNA MGP_129S1SvImJ_T0005619.1 MGP_129S1SvImJ_G0004738.1 mouse_genomes_project X 91807643 91895575 + antisense antisense MGP_129S1SvImJ_T0095878.1 MGP_129S1SvImJ_G0035631.1 mouse_genomes_project X 32039175 32057821 - MGP_129S1SvImJ_P0095878 Upf3b protein_coding protein_coding MGP_129S1SvImJ_T0095879.1 MGP_129S1SvImJ_G0035631.1 mouse_genomes_project X 32043173 32052020 - MGP_129S1SvImJ_P0095879 Upf3b protein_coding protein_coding MGP_129S1SvImJ_T0095880.1 MGP_129S1SvImJ_G0035631.1 mouse_genomes_project X 32044947 32057821 - Upf3b protein_coding processed_transcript MGP_129S1SvImJ_T0016774.1 MGP_129S1SvImJ_G0014863.1 mouse_genomes_project X 137610762 137611743 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018721.1 MGP_129S1SvImJ_G0015799.1 mouse_genomes_project X 167537789 167583987 + Gm15246 processed_transcript processed_transcript MGP_129S1SvImJ_T0018722.1 MGP_129S1SvImJ_G0015799.1 mouse_genomes_project X 167537789 167576851 + Gm15246 processed_transcript processed_transcript MGP_129S1SvImJ_T0097581.1 MGP_129S1SvImJ_G0036131.1 mouse_genomes_project X 137532502 137577199 - MGP_129S1SvImJ_P0097581 Nup62cl protein_coding protein_coding MGP_129S1SvImJ_T0097582.1 MGP_129S1SvImJ_G0036131.1 mouse_genomes_project X 137546692 137587897 - MGP_129S1SvImJ_P0097582 Nup62cl protein_coding protein_coding MGP_129S1SvImJ_T0097583.1 MGP_129S1SvImJ_G0036131.1 mouse_genomes_project X 137552239 137588316 - MGP_129S1SvImJ_P0097583 Nup62cl protein_coding protein_coding MGP_129S1SvImJ_T0097584.1 MGP_129S1SvImJ_G0036131.1 mouse_genomes_project X 137552839 137588184 - MGP_129S1SvImJ_P0097584 Nup62cl protein_coding protein_coding MGP_129S1SvImJ_T0097585.1 MGP_129S1SvImJ_G0036131.1 mouse_genomes_project X 137559420 137588155 - MGP_129S1SvImJ_P0097585 Nup62cl protein_coding protein_coding MGP_129S1SvImJ_T0016313.1 MGP_129S1SvImJ_G0014402.1 mouse_genomes_project X 40643355 40645805 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097062.1 MGP_129S1SvImJ_G0035963.1 mouse_genomes_project X 98053560 98127410 + MGP_129S1SvImJ_P0097062 Taf1 protein_coding protein_coding MGP_129S1SvImJ_T0097063.1 MGP_129S1SvImJ_G0035963.1 mouse_genomes_project X 98053567 98128160 + MGP_129S1SvImJ_P0097063 Taf1 protein_coding protein_coding MGP_129S1SvImJ_T0097064.1 MGP_129S1SvImJ_G0035963.1 mouse_genomes_project X 98053585 98127410 + MGP_129S1SvImJ_P0097064 Taf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097065.1 MGP_129S1SvImJ_G0035963.1 mouse_genomes_project X 98053585 98071702 + MGP_129S1SvImJ_P0097065 Taf1 protein_coding protein_coding MGP_129S1SvImJ_T0097066.1 MGP_129S1SvImJ_G0035963.1 mouse_genomes_project X 98078812 98127410 + Taf1 protein_coding retained_intron MGP_129S1SvImJ_T0097067.1 MGP_129S1SvImJ_G0035963.1 mouse_genomes_project X 98116922 98126947 + Taf1 protein_coding processed_transcript MGP_129S1SvImJ_T0096642.1 MGP_129S1SvImJ_G0035848.1 mouse_genomes_project X 70217649 70237564 - MGP_129S1SvImJ_P0096642 G6pdx protein_coding protein_coding MGP_129S1SvImJ_T0096643.1 MGP_129S1SvImJ_G0035848.1 mouse_genomes_project X 70219025 70237246 - MGP_129S1SvImJ_P0096643 G6pdx protein_coding protein_coding MGP_129S1SvImJ_T0096644.1 MGP_129S1SvImJ_G0035848.1 mouse_genomes_project X 70221971 70237219 - G6pdx protein_coding processed_transcript MGP_129S1SvImJ_T0096651.1 MGP_129S1SvImJ_G0035848.1 mouse_genomes_project X 70236056 70237250 - G6pdx protein_coding retained_intron MGP_129S1SvImJ_T0016766.1 MGP_129S1SvImJ_G0014855.1 mouse_genomes_project X 135971176 135972419 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016180.1 MGP_129S1SvImJ_G0014269.1 mouse_genomes_project X 300883 302231 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009380.1 MGP_129S1SvImJ_G0007533.1 mouse_genomes_project X 31742954 31745356 - Mdrl lincRNA lincRNA MGP_129S1SvImJ_T0016455.1 MGP_129S1SvImJ_G0014544.1 mouse_genomes_project X 74532401 74533356 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097245.1 MGP_129S1SvImJ_G0036022.1 mouse_genomes_project X 105948414 106016235 + MGP_129S1SvImJ_P0097245 Sh3bgrl protein_coding protein_coding MGP_129S1SvImJ_T0097246.1 MGP_129S1SvImJ_G0036022.1 mouse_genomes_project X 105948558 106049297 + Sh3bgrl protein_coding processed_transcript MGP_129S1SvImJ_T0097247.1 MGP_129S1SvImJ_G0036022.1 mouse_genomes_project X 105967919 106008114 + Sh3bgrl protein_coding processed_transcript MGP_129S1SvImJ_T0002501.1 MGP_129S1SvImJ_G0002410.1 mouse_genomes_project X 100456545 100458557 - TEC TEC MGP_129S1SvImJ_T0016607.1 MGP_129S1SvImJ_G0014696.1 mouse_genomes_project X 100695476 100695748 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016424.1 MGP_129S1SvImJ_G0014513.1 mouse_genomes_project X 70076384 70076600 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097129.1 MGP_129S1SvImJ_G0035986.1 mouse_genomes_project X 100302262 100303347 + MGP_129S1SvImJ_P0097129 Zcchc13 protein_coding protein_coding MGP_129S1SvImJ_T0098044.1 MGP_129S1SvImJ_G0036244.1 mouse_genomes_project X 160998032 161000641 - MGP_129S1SvImJ_P0098044 S100g protein_coding protein_coding MGP_129S1SvImJ_T0097406.1 MGP_129S1SvImJ_G0036076.1 mouse_genomes_project X 131936470 131939817 - MGP_129S1SvImJ_P0097406 Armcx6 protein_coding protein_coding MGP_129S1SvImJ_T0097407.1 MGP_129S1SvImJ_G0036076.1 mouse_genomes_project X 131936472 131939903 - MGP_129S1SvImJ_P0097407 Armcx6 protein_coding protein_coding MGP_129S1SvImJ_T0097408.1 MGP_129S1SvImJ_G0036076.1 mouse_genomes_project X 131938455 131939833 - Armcx6 protein_coding processed_transcript MGP_129S1SvImJ_T0097409.1 MGP_129S1SvImJ_G0036076.1 mouse_genomes_project X 131938635 131939847 - Armcx6 protein_coding processed_transcript MGP_129S1SvImJ_T0098103.1 MGP_129S1SvImJ_G0036263.1 mouse_genomes_project X 164301681 164321077 + MGP_129S1SvImJ_P0098103 Gemin8 protein_coding protein_coding MGP_129S1SvImJ_T0098104.1 MGP_129S1SvImJ_G0036263.1 mouse_genomes_project X 164301681 164322107 + MGP_129S1SvImJ_P0098104 Gemin8 protein_coding protein_coding MGP_129S1SvImJ_T0098105.1 MGP_129S1SvImJ_G0036263.1 mouse_genomes_project X 164301719 164321093 + MGP_129S1SvImJ_P0098105 Gemin8 protein_coding protein_coding MGP_129S1SvImJ_T0098106.1 MGP_129S1SvImJ_G0036263.1 mouse_genomes_project X 164301722 164322105 + MGP_129S1SvImJ_P0098106 Gemin8 protein_coding protein_coding MGP_129S1SvImJ_T0098107.1 MGP_129S1SvImJ_G0036263.1 mouse_genomes_project X 164309351 164311729 + MGP_129S1SvImJ_P0098107 Gemin8 protein_coding protein_coding MGP_129S1SvImJ_T0098108.1 MGP_129S1SvImJ_G0036263.1 mouse_genomes_project X 164309373 164311851 + MGP_129S1SvImJ_P0098108 Gemin8 protein_coding protein_coding MGP_129S1SvImJ_T0016475.1 MGP_129S1SvImJ_G0014564.1 mouse_genomes_project X 81294450 81294653 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016897.1 MGP_129S1SvImJ_G0014986.1 mouse_genomes_project X 160580259 160580713 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016884.1 MGP_129S1SvImJ_G0014973.1 mouse_genomes_project X 156993957 156996534 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009400.1 MGP_129S1SvImJ_G0007548.1 mouse_genomes_project X 88852054 88852734 + 1700010D01Rik lincRNA lincRNA MGP_129S1SvImJ_T0016839.1 MGP_129S1SvImJ_G0014928.1 mouse_genomes_project X 149408169 149409084 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100282.1 MGP_129S1SvImJ_G0038349.1 mouse_genomes_project X 131677660 131677767 + Gm23124 snRNA snRNA MGP_129S1SvImJ_T0016277.1 MGP_129S1SvImJ_G0014366.1 mouse_genomes_project X 33674704 33675218 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096112.1 MGP_129S1SvImJ_G0035715.1 mouse_genomes_project X 47250053 47366966 - MGP_129S1SvImJ_P0096112 Gpc4 protein_coding protein_coding MGP_129S1SvImJ_T0102848.1 MGP_129S1SvImJ_G0040680.1 mouse_genomes_project X 33331471 33333155 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0016922.1 MGP_129S1SvImJ_G0015011.1 mouse_genomes_project X 166184022 166184742 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011773.1 MGP_129S1SvImJ_G0009889.1 mouse_genomes_project X 32016538 32016809 - Gm24809 misc_RNA misc_RNA MGP_129S1SvImJ_T0016602.1 MGP_129S1SvImJ_G0014691.1 mouse_genomes_project X 100360293 100361011 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016743.1 MGP_129S1SvImJ_G0014832.1 mouse_genomes_project X 132106959 132107592 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097264.1 MGP_129S1SvImJ_G0036028.1 mouse_genomes_project X 108302381 108404257 - MGP_129S1SvImJ_P0097264 Hdx protein_coding protein_coding MGP_129S1SvImJ_T0096813.1 MGP_129S1SvImJ_G0035903.1 mouse_genomes_project X 89664078 89994606 - MGP_129S1SvImJ_P0096813 Pola1 protein_coding protein_coding MGP_129S1SvImJ_T0096814.1 MGP_129S1SvImJ_G0035903.1 mouse_genomes_project X 89845030 89855487 - Pola1 protein_coding processed_transcript MGP_129S1SvImJ_T0096815.1 MGP_129S1SvImJ_G0035903.1 mouse_genomes_project X 89985553 89994594 - Pola1 protein_coding retained_intron MGP_129S1SvImJ_T0096816.1 MGP_129S1SvImJ_G0035903.1 mouse_genomes_project X 89985773 89994566 - Pola1 protein_coding processed_transcript MGP_129S1SvImJ_T0100301.1 MGP_129S1SvImJ_G0038368.1 mouse_genomes_project X 166785306 166785418 - Gm23197 snRNA snRNA MGP_129S1SvImJ_T0018641.1 MGP_129S1SvImJ_G0015773.1 mouse_genomes_project X 7891205 7894400 + 5730405O15Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018642.1 MGP_129S1SvImJ_G0015773.1 mouse_genomes_project X 7891241 7894487 + 5730405O15Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0016768.1 MGP_129S1SvImJ_G0014857.1 mouse_genomes_project X 136670038 136670748 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016504.1 MGP_129S1SvImJ_G0014593.1 mouse_genomes_project X 86056613 86061335 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097366.1 MGP_129S1SvImJ_G0036066.1 mouse_genomes_project X 131482538 131539694 + MGP_129S1SvImJ_P0097366 Cenpi protein_coding protein_coding MGP_129S1SvImJ_T0097367.1 MGP_129S1SvImJ_G0036066.1 mouse_genomes_project X 131482609 131539691 + MGP_129S1SvImJ_P0097367 Cenpi protein_coding protein_coding MGP_129S1SvImJ_T0097368.1 MGP_129S1SvImJ_G0036066.1 mouse_genomes_project X 131482653 131484705 + MGP_129S1SvImJ_P0097368 Cenpi protein_coding protein_coding MGP_129S1SvImJ_T0097369.1 MGP_129S1SvImJ_G0036066.1 mouse_genomes_project X 131487787 131521504 + Cenpi protein_coding processed_transcript MGP_129S1SvImJ_T0097370.1 MGP_129S1SvImJ_G0036066.1 mouse_genomes_project X 131523173 131539692 + Cenpi protein_coding processed_transcript MGP_129S1SvImJ_T0016416.1 MGP_129S1SvImJ_G0014505.1 mouse_genomes_project X 66393407 66394012 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101540.1 MGP_129S1SvImJ_G0039607.1 mouse_genomes_project X 128018299 128018428 - Gm25170 snoRNA snoRNA MGP_129S1SvImJ_T0016676.1 MGP_129S1SvImJ_G0014765.1 mouse_genomes_project X 114123980 114124248 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096204.1 MGP_129S1SvImJ_G0035752.1 mouse_genomes_project X 53961157 53961987 - MGP_129S1SvImJ_P0096204 protein_coding protein_coding MGP_129S1SvImJ_T0016907.1 MGP_129S1SvImJ_G0014996.1 mouse_genomes_project X 161529970 161531455 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016647.1 MGP_129S1SvImJ_G0014736.1 mouse_genomes_project X 108761811 108762544 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097927.1 MGP_129S1SvImJ_G0036221.1 mouse_genomes_project X 155709063 155710998 + MGP_129S1SvImJ_P0097927 Klhl34 protein_coding protein_coding MGP_129S1SvImJ_T0096169.1 MGP_129S1SvImJ_G0035741.1 mouse_genomes_project X 52101953 52126333 - MGP_129S1SvImJ_P0096169 Mtap7d3 protein_coding protein_coding MGP_129S1SvImJ_T0096170.1 MGP_129S1SvImJ_G0035741.1 mouse_genomes_project X 52113670 52126321 - MGP_129S1SvImJ_P0096170 Mtap7d3 protein_coding protein_coding MGP_129S1SvImJ_T0016377.1 MGP_129S1SvImJ_G0014466.1 mouse_genomes_project X 57655382 57656482 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016267.1 MGP_129S1SvImJ_G0014356.1 mouse_genomes_project X 18730709 18731925 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016283.1 MGP_129S1SvImJ_G0014372.1 mouse_genomes_project X 34211008 34211329 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016737.1 MGP_129S1SvImJ_G0014826.1 mouse_genomes_project X 131869366 131869724 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016367.1 MGP_129S1SvImJ_G0014456.1 mouse_genomes_project X 56492716 56493869 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100295.1 MGP_129S1SvImJ_G0038362.1 mouse_genomes_project X 160095219 160095323 + Gm23794 snRNA snRNA MGP_129S1SvImJ_T0096144.1 MGP_129S1SvImJ_G0035734.1 mouse_genomes_project X 51735113 51736712 + MGP_129S1SvImJ_P0096144 Gm2174 protein_coding protein_coding MGP_129S1SvImJ_T0005609.1 MGP_129S1SvImJ_G0004729.1 mouse_genomes_project X 64977941 64982631 - Gm14705 antisense antisense MGP_129S1SvImJ_T0005610.1 MGP_129S1SvImJ_G0004729.1 mouse_genomes_project X 64979303 64981703 - Gm14705 antisense antisense MGP_129S1SvImJ_T0095813.1 MGP_129S1SvImJ_G0035607.1 mouse_genomes_project X 16084464 16086345 - MGP_129S1SvImJ_P0095813 Gm21876 protein_coding protein_coding MGP_129S1SvImJ_T0097759.1 MGP_129S1SvImJ_G0036174.1 mouse_genomes_project X 148774443 148821521 + MGP_129S1SvImJ_P0097759 Fgd1 protein_coding protein_coding MGP_129S1SvImJ_T0097760.1 MGP_129S1SvImJ_G0036174.1 mouse_genomes_project X 148775463 148821521 + MGP_129S1SvImJ_P0097760 Fgd1 protein_coding protein_coding MGP_129S1SvImJ_T0097761.1 MGP_129S1SvImJ_G0036174.1 mouse_genomes_project X 148797790 148800076 + Fgd1 protein_coding retained_intron MGP_129S1SvImJ_T0097762.1 MGP_129S1SvImJ_G0036174.1 mouse_genomes_project X 148818109 148819181 + Fgd1 protein_coding retained_intron MGP_129S1SvImJ_T0097872.1 MGP_129S1SvImJ_G0036200.1 mouse_genomes_project X 151949310 151972716 - MGP_129S1SvImJ_P0097872 protein_coding protein_coding MGP_129S1SvImJ_T0016502.1 MGP_129S1SvImJ_G0014591.1 mouse_genomes_project X 85669621 85670129 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096761.1 MGP_129S1SvImJ_G0035882.1 mouse_genomes_project X 75710933 75711884 - MGP_129S1SvImJ_P0096761 Olfr639 protein_coding protein_coding MGP_129S1SvImJ_T0095749.1 MGP_129S1SvImJ_G0035592.1 mouse_genomes_project X 15500214 15502512 - MGP_129S1SvImJ_P0095749 Ndufb11 protein_coding protein_coding MGP_129S1SvImJ_T0016469.1 MGP_129S1SvImJ_G0014558.1 mouse_genomes_project X 78324825 78325111 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101533.1 MGP_129S1SvImJ_G0039600.1 mouse_genomes_project X 110647570 110647694 - Gm23985 snoRNA snoRNA MGP_129S1SvImJ_T0095504.1 MGP_129S1SvImJ_G0035523.1 mouse_genomes_project X 2380144 2383656 + Tfe3 protein_coding retained_intron MGP_129S1SvImJ_T0095505.1 MGP_129S1SvImJ_G0035523.1 mouse_genomes_project X 2380170 2384352 + Tfe3 protein_coding processed_transcript MGP_129S1SvImJ_T0095506.1 MGP_129S1SvImJ_G0035523.1 mouse_genomes_project X 2380242 2392787 + MGP_129S1SvImJ_P0095506 Tfe3 protein_coding protein_coding MGP_129S1SvImJ_T0095507.1 MGP_129S1SvImJ_G0035523.1 mouse_genomes_project X 2380248 2392784 + MGP_129S1SvImJ_P0095507 Tfe3 protein_coding protein_coding MGP_129S1SvImJ_T0095508.1 MGP_129S1SvImJ_G0035523.1 mouse_genomes_project X 2380260 2392786 + MGP_129S1SvImJ_P0095508 Tfe3 protein_coding protein_coding MGP_129S1SvImJ_T0095509.1 MGP_129S1SvImJ_G0035523.1 mouse_genomes_project X 2380279 2392784 + MGP_129S1SvImJ_P0095509 Tfe3 protein_coding protein_coding MGP_129S1SvImJ_T0095510.1 MGP_129S1SvImJ_G0035523.1 mouse_genomes_project X 2380281 2392786 + Tfe3 protein_coding retained_intron MGP_129S1SvImJ_T0095511.1 MGP_129S1SvImJ_G0035523.1 mouse_genomes_project X 2380351 2392787 + MGP_129S1SvImJ_P0095511 Tfe3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095512.1 MGP_129S1SvImJ_G0035523.1 mouse_genomes_project X 2381527 2384377 + MGP_129S1SvImJ_P0095512 Tfe3 protein_coding protein_coding MGP_129S1SvImJ_T0095513.1 MGP_129S1SvImJ_G0035523.1 mouse_genomes_project X 2381543 2392786 + MGP_129S1SvImJ_P0095513 Tfe3 protein_coding protein_coding MGP_129S1SvImJ_T0095514.1 MGP_129S1SvImJ_G0035523.1 mouse_genomes_project X 2381625 2392782 + MGP_129S1SvImJ_P0095514 Tfe3 protein_coding protein_coding MGP_129S1SvImJ_T0095515.1 MGP_129S1SvImJ_G0035523.1 mouse_genomes_project X 2381671 2392784 + MGP_129S1SvImJ_P0095515 Tfe3 protein_coding protein_coding MGP_129S1SvImJ_T0095516.1 MGP_129S1SvImJ_G0035523.1 mouse_genomes_project X 2382236 2392782 + Tfe3 protein_coding retained_intron MGP_129S1SvImJ_T0095517.1 MGP_129S1SvImJ_G0035523.1 mouse_genomes_project X 2387014 2388903 + Tfe3 protein_coding retained_intron MGP_129S1SvImJ_T0016410.1 MGP_129S1SvImJ_G0014499.1 mouse_genomes_project X 66046800 66047724 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097610.1 MGP_129S1SvImJ_G0036141.1 mouse_genomes_project X 138625274 138632492 + MGP_129S1SvImJ_P0097610 protein_coding protein_coding MGP_129S1SvImJ_T0016407.1 MGP_129S1SvImJ_G0014496.1 mouse_genomes_project X 66020830 66021417 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016610.1 MGP_129S1SvImJ_G0014699.1 mouse_genomes_project X 101691751 101692249 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016261.1 MGP_129S1SvImJ_G0014350.1 mouse_genomes_project X 17108446 17108800 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016305.1 MGP_129S1SvImJ_G0014394.1 mouse_genomes_project X 38679889 38680172 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095543.1 MGP_129S1SvImJ_G0035528.1 mouse_genomes_project X 2506712 2520625 + MGP_129S1SvImJ_P0095543 Slc35a2 protein_coding protein_coding MGP_129S1SvImJ_T0095544.1 MGP_129S1SvImJ_G0035528.1 mouse_genomes_project X 2506915 2520597 + MGP_129S1SvImJ_P0095544 Slc35a2 protein_coding protein_coding MGP_129S1SvImJ_T0095545.1 MGP_129S1SvImJ_G0035528.1 mouse_genomes_project X 2506994 2520160 + MGP_129S1SvImJ_P0095545 Slc35a2 protein_coding protein_coding MGP_129S1SvImJ_T0095546.1 MGP_129S1SvImJ_G0035528.1 mouse_genomes_project X 2507049 2520595 + MGP_129S1SvImJ_P0095546 Slc35a2 protein_coding protein_coding MGP_129S1SvImJ_T0095547.1 MGP_129S1SvImJ_G0035528.1 mouse_genomes_project X 2508507 2520593 + MGP_129S1SvImJ_P0095547 Slc35a2 protein_coding protein_coding MGP_129S1SvImJ_T0095548.1 MGP_129S1SvImJ_G0035528.1 mouse_genomes_project X 2519153 2520597 + Slc35a2 protein_coding processed_transcript MGP_129S1SvImJ_T0016566.1 MGP_129S1SvImJ_G0014655.1 mouse_genomes_project X 97044501 97044901 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011210.1 MGP_129S1SvImJ_G0009326.1 mouse_genomes_project X 90672860 90672924 + Mir7673 miRNA miRNA MGP_129S1SvImJ_T0016765.1 MGP_129S1SvImJ_G0014854.1 mouse_genomes_project X 135528513 135528720 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097940.1 MGP_129S1SvImJ_G0036224.1 mouse_genomes_project X 157266758 157271139 + Eif1ax protein_coding retained_intron MGP_129S1SvImJ_T0097941.1 MGP_129S1SvImJ_G0036224.1 mouse_genomes_project X 157266758 157285633 + MGP_129S1SvImJ_P0097941 Eif1ax protein_coding protein_coding MGP_129S1SvImJ_T0016340.1 MGP_129S1SvImJ_G0014429.1 mouse_genomes_project X 49040194 49040395 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097881.1 MGP_129S1SvImJ_G0036209.1 mouse_genomes_project X 152964556 152970497 - MGP_129S1SvImJ_P0097881 protein_coding protein_coding MGP_129S1SvImJ_T0016339.1 MGP_129S1SvImJ_G0014428.1 mouse_genomes_project X 48898802 48899432 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016326.1 MGP_129S1SvImJ_G0014415.1 mouse_genomes_project X 45102023 45102696 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016819.1 MGP_129S1SvImJ_G0014908.1 mouse_genomes_project X 143554351 143555186 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097560.1 MGP_129S1SvImJ_G0036127.1 mouse_genomes_project X 137293273 137296078 - MGP_129S1SvImJ_P0097560 Ripply1 protein_coding protein_coding MGP_129S1SvImJ_T0016726.1 MGP_129S1SvImJ_G0014815.1 mouse_genomes_project X 128660859 128662036 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016870.1 MGP_129S1SvImJ_G0014959.1 mouse_genomes_project X 155502749 155502884 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016915.1 MGP_129S1SvImJ_G0015004.1 mouse_genomes_project X 164337346 164337745 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097625.1 MGP_129S1SvImJ_G0036148.1 mouse_genomes_project X 139724441 139736182 + MGP_129S1SvImJ_P0097625 Nxt2 protein_coding protein_coding MGP_129S1SvImJ_T0097626.1 MGP_129S1SvImJ_G0036148.1 mouse_genomes_project X 139725896 139728823 + Nxt2 protein_coding retained_intron MGP_129S1SvImJ_T0097627.1 MGP_129S1SvImJ_G0036148.1 mouse_genomes_project X 139726036 139736188 + MGP_129S1SvImJ_P0097627 Nxt2 protein_coding protein_coding MGP_129S1SvImJ_T0096335.1 MGP_129S1SvImJ_G0035796.1 mouse_genomes_project X 68616156 68647683 + MGP_129S1SvImJ_P0096335 Nsdhl protein_coding protein_coding MGP_129S1SvImJ_T0096336.1 MGP_129S1SvImJ_G0035796.1 mouse_genomes_project X 68627305 68642825 + Nsdhl protein_coding retained_intron MGP_129S1SvImJ_T0096354.1 MGP_129S1SvImJ_G0035808.1 mouse_genomes_project X 69156358 69174488 + MGP_129S1SvImJ_P0096354 Zfp92 protein_coding protein_coding MGP_129S1SvImJ_T0096355.1 MGP_129S1SvImJ_G0035808.1 mouse_genomes_project X 69156822 69175875 + MGP_129S1SvImJ_P0096355 Zfp92 protein_coding protein_coding MGP_129S1SvImJ_T0016470.1 MGP_129S1SvImJ_G0014559.1 mouse_genomes_project X 78362164 78363314 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016926.1 MGP_129S1SvImJ_G0015015.1 mouse_genomes_project X 166979593 166979993 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011777.1 MGP_129S1SvImJ_G0009893.1 mouse_genomes_project X 64273355 64273411 + Gm27979 misc_RNA misc_RNA MGP_129S1SvImJ_T0097302.1 MGP_129S1SvImJ_G0036043.1 mouse_genomes_project X 115322723 115323753 - MGP_129S1SvImJ_P0097302 Tgif2lx2 protein_coding protein_coding MGP_129S1SvImJ_T0095739.1 MGP_129S1SvImJ_G0035589.1 mouse_genomes_project X 15240089 15278868 + MGP_129S1SvImJ_P0095739 Rp2 protein_coding protein_coding MGP_129S1SvImJ_T0095740.1 MGP_129S1SvImJ_G0035589.1 mouse_genomes_project X 15240089 15278864 + MGP_129S1SvImJ_P0095740 Rp2 protein_coding protein_coding MGP_129S1SvImJ_T0095741.1 MGP_129S1SvImJ_G0035589.1 mouse_genomes_project X 15240167 15278864 + MGP_129S1SvImJ_P0095741 Rp2 protein_coding protein_coding MGP_129S1SvImJ_T0095742.1 MGP_129S1SvImJ_G0035589.1 mouse_genomes_project X 15240183 15285009 + MGP_129S1SvImJ_P0095742 Rp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095743.1 MGP_129S1SvImJ_G0035589.1 mouse_genomes_project X 15240227 15284986 + MGP_129S1SvImJ_P0095743 Rp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097914.1 MGP_129S1SvImJ_G0036219.1 mouse_genomes_project X 155460373 155463240 - MGP_129S1SvImJ_P0097914 Yy2 protein_coding protein_coding MGP_129S1SvImJ_T0095907.1 MGP_129S1SvImJ_G0035653.1 mouse_genomes_project X 32805592 32809588 - MGP_129S1SvImJ_P0095907 Rhox8 protein_coding protein_coding MGP_129S1SvImJ_T0100230.1 MGP_129S1SvImJ_G0038297.1 mouse_genomes_project X 14632430 14632537 - Gm23678 snRNA snRNA MGP_129S1SvImJ_T0096371.1 MGP_129S1SvImJ_G0035813.1 mouse_genomes_project X 69406387 69410489 + MGP_129S1SvImJ_P0096371 Dusp9 protein_coding protein_coding MGP_129S1SvImJ_T0096352.1 MGP_129S1SvImJ_G0035807.1 mouse_genomes_project X 69088869 69105330 + MGP_129S1SvImJ_P0096352 Zfp275 protein_coding protein_coding MGP_129S1SvImJ_T0096353.1 MGP_129S1SvImJ_G0035807.1 mouse_genomes_project X 69090711 69098089 + Zfp275 protein_coding retained_intron MGP_129S1SvImJ_T0016301.1 MGP_129S1SvImJ_G0014390.1 mouse_genomes_project X 37415928 37416096 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009401.1 MGP_129S1SvImJ_G0007549.1 mouse_genomes_project X 91228160 91232742 + lincRNA lincRNA MGP_129S1SvImJ_T0095852.1 MGP_129S1SvImJ_G0035623.1 mouse_genomes_project X 31663810 31699918 + MGP_129S1SvImJ_P0095852 Slc25a43 protein_coding protein_coding MGP_129S1SvImJ_T0095853.1 MGP_129S1SvImJ_G0035623.1 mouse_genomes_project X 31663862 31699001 + Slc25a43 protein_coding processed_transcript MGP_129S1SvImJ_T0096754.1 MGP_129S1SvImJ_G0035881.1 mouse_genomes_project X 75144849 75413329 - MGP_129S1SvImJ_P0096754 Gm7173 protein_coding protein_coding MGP_129S1SvImJ_T0096755.1 MGP_129S1SvImJ_G0035881.1 mouse_genomes_project X 75144862 75413329 - MGP_129S1SvImJ_P0096755 Gm7173 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0096756.1 MGP_129S1SvImJ_G0035881.1 mouse_genomes_project X 75214701 75238799 - Gm7173 protein_coding retained_intron MGP_129S1SvImJ_T0096757.1 MGP_129S1SvImJ_G0035881.1 mouse_genomes_project X 75214899 75250153 - MGP_129S1SvImJ_P0096757 Gm7173 protein_coding protein_coding MGP_129S1SvImJ_T0096758.1 MGP_129S1SvImJ_G0035881.1 mouse_genomes_project X 75234083 75250262 - Gm7173 protein_coding processed_transcript MGP_129S1SvImJ_T0096759.1 MGP_129S1SvImJ_G0035881.1 mouse_genomes_project X 75299208 75328407 - MGP_129S1SvImJ_P0096759 Gm7173 protein_coding protein_coding MGP_129S1SvImJ_T0096760.1 MGP_129S1SvImJ_G0035881.1 mouse_genomes_project X 75376462 75413329 - MGP_129S1SvImJ_P0096760 Gm7173 protein_coding protein_coding MGP_129S1SvImJ_T0016601.1 MGP_129S1SvImJ_G0014690.1 mouse_genomes_project X 100356186 100356505 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096940.1 MGP_129S1SvImJ_G0035936.1 mouse_genomes_project X 95897906 95903421 - MGP_129S1SvImJ_P0096940 Pja1 protein_coding protein_coding MGP_129S1SvImJ_T0096941.1 MGP_129S1SvImJ_G0035936.1 mouse_genomes_project X 95897910 95902832 - MGP_129S1SvImJ_P0096941 Pja1 protein_coding protein_coding MGP_129S1SvImJ_T0096942.1 MGP_129S1SvImJ_G0035936.1 mouse_genomes_project X 95897940 95902880 - MGP_129S1SvImJ_P0096942 Pja1 protein_coding protein_coding MGP_129S1SvImJ_T0096943.1 MGP_129S1SvImJ_G0035936.1 mouse_genomes_project X 95898286 95902837 - MGP_129S1SvImJ_P0096943 Pja1 protein_coding protein_coding MGP_129S1SvImJ_T0096944.1 MGP_129S1SvImJ_G0035936.1 mouse_genomes_project X 95898318 95902817 - MGP_129S1SvImJ_P0096944 Pja1 protein_coding protein_coding MGP_129S1SvImJ_T0016715.1 MGP_129S1SvImJ_G0014804.1 mouse_genomes_project X 125074718 125077513 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011183.1 MGP_129S1SvImJ_G0009299.1 mouse_genomes_project X 62369063 62369130 - Mir471 miRNA miRNA MGP_129S1SvImJ_T0011140.1 MGP_129S1SvImJ_G0009256.1 mouse_genomes_project X 1837499 1837567 - Mir188 miRNA miRNA MGP_129S1SvImJ_T0097637.1 MGP_129S1SvImJ_G0036154.1 mouse_genomes_project X 140826080 140937166 - MGP_129S1SvImJ_P0097637 Chrdl1 protein_coding protein_coding MGP_129S1SvImJ_T0097638.1 MGP_129S1SvImJ_G0036154.1 mouse_genomes_project X 140826090 140941329 - MGP_129S1SvImJ_P0097638 Chrdl1 protein_coding protein_coding MGP_129S1SvImJ_T0097639.1 MGP_129S1SvImJ_G0036154.1 mouse_genomes_project X 140837580 140941251 - MGP_129S1SvImJ_P0097639 Chrdl1 protein_coding protein_coding MGP_129S1SvImJ_T0097640.1 MGP_129S1SvImJ_G0036154.1 mouse_genomes_project X 140837582 140940963 - MGP_129S1SvImJ_P0097640 Chrdl1 protein_coding protein_coding MGP_129S1SvImJ_T0097641.1 MGP_129S1SvImJ_G0036154.1 mouse_genomes_project X 140840228 140940953 - MGP_129S1SvImJ_P0097641 Chrdl1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0016849.1 MGP_129S1SvImJ_G0014938.1 mouse_genomes_project X 151328788 151329173 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097767.1 MGP_129S1SvImJ_G0036176.1 mouse_genomes_project X 148905352 149060390 + MGP_129S1SvImJ_P0097767 Wnk3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0097768.1 MGP_129S1SvImJ_G0036176.1 mouse_genomes_project X 148938053 149060448 + MGP_129S1SvImJ_P0097768 Wnk3 protein_coding protein_coding MGP_129S1SvImJ_T0097769.1 MGP_129S1SvImJ_G0036176.1 mouse_genomes_project X 148938115 149060390 + MGP_129S1SvImJ_P0097769 Wnk3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097770.1 MGP_129S1SvImJ_G0036176.1 mouse_genomes_project X 148938115 149063571 + MGP_129S1SvImJ_P0097770 Wnk3 protein_coding protein_coding MGP_129S1SvImJ_T0097771.1 MGP_129S1SvImJ_G0036176.1 mouse_genomes_project X 148947725 148966668 + Wnk3 protein_coding processed_transcript MGP_129S1SvImJ_T0097772.1 MGP_129S1SvImJ_G0036176.1 mouse_genomes_project X 149040225 149065414 + Wnk3 protein_coding processed_transcript MGP_129S1SvImJ_T0096986.1 MGP_129S1SvImJ_G0035949.1 mouse_genomes_project X 97236260 97291394 + MGP_129S1SvImJ_P0096986 Dlg3 protein_coding protein_coding MGP_129S1SvImJ_T0096987.1 MGP_129S1SvImJ_G0035949.1 mouse_genomes_project X 97236261 97291396 + MGP_129S1SvImJ_P0096987 Dlg3 protein_coding protein_coding MGP_129S1SvImJ_T0096988.1 MGP_129S1SvImJ_G0035949.1 mouse_genomes_project X 97236287 97291396 + MGP_129S1SvImJ_P0096988 Dlg3 protein_coding protein_coding MGP_129S1SvImJ_T0096989.1 MGP_129S1SvImJ_G0035949.1 mouse_genomes_project X 97236533 97291398 + Dlg3 protein_coding retained_intron MGP_129S1SvImJ_T0096990.1 MGP_129S1SvImJ_G0035949.1 mouse_genomes_project X 97243274 97291396 + MGP_129S1SvImJ_P0096990 Dlg3 protein_coding protein_coding MGP_129S1SvImJ_T0096991.1 MGP_129S1SvImJ_G0035949.1 mouse_genomes_project X 97245789 97291396 + Dlg3 protein_coding processed_transcript MGP_129S1SvImJ_T0096992.1 MGP_129S1SvImJ_G0035949.1 mouse_genomes_project X 97267434 97279146 + Dlg3 protein_coding processed_transcript MGP_129S1SvImJ_T0096993.1 MGP_129S1SvImJ_G0035949.1 mouse_genomes_project X 97280532 97287363 + Dlg3 protein_coding processed_transcript MGP_129S1SvImJ_T0096152.1 MGP_129S1SvImJ_G0035736.1 mouse_genomes_project X 51813874 51814793 + MGP_129S1SvImJ_P0096152 Gm10477 protein_coding protein_coding MGP_129S1SvImJ_T0016381.1 MGP_129S1SvImJ_G0014470.1 mouse_genomes_project X 58508152 58509065 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096628.1 MGP_129S1SvImJ_G0035846.1 mouse_genomes_project X 70191523 70201491 - MGP_129S1SvImJ_P0096628 Fam3a protein_coding protein_coding MGP_129S1SvImJ_T0096629.1 MGP_129S1SvImJ_G0035846.1 mouse_genomes_project X 70191565 70201322 - MGP_129S1SvImJ_P0096629 Fam3a protein_coding protein_coding MGP_129S1SvImJ_T0096630.1 MGP_129S1SvImJ_G0035846.1 mouse_genomes_project X 70191565 70201222 - MGP_129S1SvImJ_P0096630 Fam3a protein_coding protein_coding MGP_129S1SvImJ_T0096631.1 MGP_129S1SvImJ_G0035846.1 mouse_genomes_project X 70192008 70201401 - MGP_129S1SvImJ_P0096631 Fam3a protein_coding protein_coding MGP_129S1SvImJ_T0096632.1 MGP_129S1SvImJ_G0035846.1 mouse_genomes_project X 70192106 70201322 - MGP_129S1SvImJ_P0096632 Fam3a protein_coding protein_coding MGP_129S1SvImJ_T0096633.1 MGP_129S1SvImJ_G0035846.1 mouse_genomes_project X 70193226 70201474 - MGP_129S1SvImJ_P0096633 Fam3a protein_coding protein_coding MGP_129S1SvImJ_T0096634.1 MGP_129S1SvImJ_G0035846.1 mouse_genomes_project X 70193436 70201322 - MGP_129S1SvImJ_P0096634 Fam3a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096635.1 MGP_129S1SvImJ_G0035846.1 mouse_genomes_project X 70193660 70194560 - Fam3a protein_coding retained_intron MGP_129S1SvImJ_T0096636.1 MGP_129S1SvImJ_G0035846.1 mouse_genomes_project X 70193716 70200969 - MGP_129S1SvImJ_P0096636 Fam3a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096637.1 MGP_129S1SvImJ_G0035846.1 mouse_genomes_project X 70193716 70200906 - MGP_129S1SvImJ_P0096637 Fam3a protein_coding protein_coding MGP_129S1SvImJ_T0016529.1 MGP_129S1SvImJ_G0014618.1 mouse_genomes_project X 90720669 90721522 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100232.1 MGP_129S1SvImJ_G0038299.1 mouse_genomes_project X 15692660 15692765 - Gm26065 snRNA snRNA MGP_129S1SvImJ_T0097393.1 MGP_129S1SvImJ_G0036073.1 mouse_genomes_project X 131772434 131785389 - MGP_129S1SvImJ_P0097393 Gla protein_coding protein_coding MGP_129S1SvImJ_T0097394.1 MGP_129S1SvImJ_G0036073.1 mouse_genomes_project X 131779553 131784556 - MGP_129S1SvImJ_P0097394 Gla protein_coding protein_coding MGP_129S1SvImJ_T0100269.1 MGP_129S1SvImJ_G0038336.1 mouse_genomes_project X 103421373 103421535 - Gm24622 snRNA snRNA MGP_129S1SvImJ_T0096617.1 MGP_129S1SvImJ_G0035844.1 mouse_genomes_project X 70171935 70174891 - MGP_129S1SvImJ_P0096617 Ubl4a protein_coding protein_coding MGP_129S1SvImJ_T0096618.1 MGP_129S1SvImJ_G0035844.1 mouse_genomes_project X 70171936 70174776 - Ubl4a protein_coding processed_transcript MGP_129S1SvImJ_T0096619.1 MGP_129S1SvImJ_G0035844.1 mouse_genomes_project X 70173489 70174684 - MGP_129S1SvImJ_P0096619 Ubl4a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096620.1 MGP_129S1SvImJ_G0035844.1 mouse_genomes_project X 70173527 70174714 - Ubl4a protein_coding retained_intron MGP_129S1SvImJ_T0096621.1 MGP_129S1SvImJ_G0035844.1 mouse_genomes_project X 70173682 70179428 - MGP_129S1SvImJ_P0096621 Ubl4a protein_coding protein_coding MGP_129S1SvImJ_T0096622.1 MGP_129S1SvImJ_G0035844.1 mouse_genomes_project X 70173960 70174731 - Ubl4a protein_coding retained_intron MGP_129S1SvImJ_T0096623.1 MGP_129S1SvImJ_G0035844.1 mouse_genomes_project X 70174014 70174721 - Ubl4a protein_coding processed_transcript MGP_129S1SvImJ_T0016866.1 MGP_129S1SvImJ_G0014955.1 mouse_genomes_project X 154892920 154894396 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016351.1 MGP_129S1SvImJ_G0014440.1 mouse_genomes_project X 53762797 53763214 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096892.1 MGP_129S1SvImJ_G0035923.1 mouse_genomes_project X 92465909 92543857 + MGP_129S1SvImJ_P0096892 Msn protein_coding protein_coding MGP_129S1SvImJ_T0096893.1 MGP_129S1SvImJ_G0035923.1 mouse_genomes_project X 92465924 92526300 + Msn protein_coding processed_transcript MGP_129S1SvImJ_T0096894.1 MGP_129S1SvImJ_G0035923.1 mouse_genomes_project X 92465964 92524220 + Msn protein_coding processed_transcript MGP_129S1SvImJ_T0098682.1 MGP_129S1SvImJ_G0036767.1 mouse_genomes_project X 66763668 66763786 + n-R5s8 rRNA rRNA MGP_129S1SvImJ_T0097642.1 MGP_129S1SvImJ_G0036155.1 mouse_genomes_project X 141072231 141361855 + MGP_129S1SvImJ_P0097642 Pak3 protein_coding protein_coding MGP_129S1SvImJ_T0097643.1 MGP_129S1SvImJ_G0036155.1 mouse_genomes_project X 141072338 141327524 + MGP_129S1SvImJ_P0097643 Pak3 protein_coding protein_coding MGP_129S1SvImJ_T0097644.1 MGP_129S1SvImJ_G0036155.1 mouse_genomes_project X 141224554 141361855 + MGP_129S1SvImJ_P0097644 Pak3 protein_coding protein_coding MGP_129S1SvImJ_T0097645.1 MGP_129S1SvImJ_G0036155.1 mouse_genomes_project X 141224637 141254112 + MGP_129S1SvImJ_P0097645 Pak3 protein_coding protein_coding MGP_129S1SvImJ_T0097646.1 MGP_129S1SvImJ_G0036155.1 mouse_genomes_project X 141224655 141277492 + MGP_129S1SvImJ_P0097646 Pak3 protein_coding protein_coding MGP_129S1SvImJ_T0097647.1 MGP_129S1SvImJ_G0036155.1 mouse_genomes_project X 141224790 141295463 + MGP_129S1SvImJ_P0097647 Pak3 protein_coding protein_coding MGP_129S1SvImJ_T0097648.1 MGP_129S1SvImJ_G0036155.1 mouse_genomes_project X 141224843 141361855 + MGP_129S1SvImJ_P0097648 Pak3 protein_coding protein_coding MGP_129S1SvImJ_T0097649.1 MGP_129S1SvImJ_G0036155.1 mouse_genomes_project X 141226009 141361855 + MGP_129S1SvImJ_P0097649 Pak3 protein_coding protein_coding MGP_129S1SvImJ_T0097650.1 MGP_129S1SvImJ_G0036155.1 mouse_genomes_project X 141226009 141361855 + MGP_129S1SvImJ_P0097650 Pak3 protein_coding protein_coding MGP_129S1SvImJ_T0097651.1 MGP_129S1SvImJ_G0036155.1 mouse_genomes_project X 141254013 141361859 + MGP_129S1SvImJ_P0097651 Pak3 protein_coding protein_coding MGP_129S1SvImJ_T0016295.1 MGP_129S1SvImJ_G0014384.1 mouse_genomes_project X 36401736 36401992 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005616.1 MGP_129S1SvImJ_G0004735.1 mouse_genomes_project X 72126253 72126837 - Gm14707 antisense antisense MGP_129S1SvImJ_T0016682.1 MGP_129S1SvImJ_G0014771.1 mouse_genomes_project X 114719968 114720414 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095676.1 MGP_129S1SvImJ_G0035568.1 mouse_genomes_project X 7478082 7498633 - MGP_129S1SvImJ_P0095676 1810030O07Rik protein_coding protein_coding MGP_129S1SvImJ_T0016310.1 MGP_129S1SvImJ_G0014399.1 mouse_genomes_project X 39601912 39602252 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100289.1 MGP_129S1SvImJ_G0038356.1 mouse_genomes_project X 149008652 149008756 - Gm26441 snRNA snRNA MGP_129S1SvImJ_T0016916.1 MGP_129S1SvImJ_G0015005.1 mouse_genomes_project X 164608604 164610002 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016622.1 MGP_129S1SvImJ_G0014711.1 mouse_genomes_project X 103447869 103448162 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016271.1 MGP_129S1SvImJ_G0014360.1 mouse_genomes_project X 31208224 31208720 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011143.1 MGP_129S1SvImJ_G0009259.1 mouse_genomes_project X 7706782 7706876 - Gm25063 miRNA miRNA MGP_129S1SvImJ_T0100243.1 MGP_129S1SvImJ_G0038310.1 mouse_genomes_project X 43457847 43457948 + Gm22612 snRNA snRNA MGP_129S1SvImJ_T0096733.1 MGP_129S1SvImJ_G0035871.1 mouse_genomes_project X 73667511 73684946 - MGP_129S1SvImJ_P0096733 Pbsn protein_coding protein_coding MGP_129S1SvImJ_T0096734.1 MGP_129S1SvImJ_G0035871.1 mouse_genomes_project X 73667512 73684853 - MGP_129S1SvImJ_P0096734 Pbsn protein_coding protein_coding MGP_129S1SvImJ_T0016299.1 MGP_129S1SvImJ_G0014388.1 mouse_genomes_project X 36967608 36968181 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016770.1 MGP_129S1SvImJ_G0014859.1 mouse_genomes_project X 136851968 136852758 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096237.1 MGP_129S1SvImJ_G0035766.1 mouse_genomes_project X 59766652 59778786 - MGP_129S1SvImJ_P0096237 Slitrk4 protein_coding protein_coding MGP_129S1SvImJ_T0096238.1 MGP_129S1SvImJ_G0035766.1 mouse_genomes_project X 59771566 59778769 - MGP_129S1SvImJ_P0096238 Slitrk4 protein_coding protein_coding MGP_129S1SvImJ_T0096239.1 MGP_129S1SvImJ_G0035766.1 mouse_genomes_project X 59774517 59777612 - MGP_129S1SvImJ_P0096239 Slitrk4 protein_coding protein_coding MGP_129S1SvImJ_T0016178.1 MGP_129S1SvImJ_G0014267.1 mouse_genomes_project X 208460 211325 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016264.1 MGP_129S1SvImJ_G0014353.1 mouse_genomes_project X 17335372 17335915 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016581.1 MGP_129S1SvImJ_G0014670.1 mouse_genomes_project X 99248047 99249452 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016771.1 MGP_129S1SvImJ_G0014860.1 mouse_genomes_project X 137180773 137182118 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097232.1 MGP_129S1SvImJ_G0036017.1 mouse_genomes_project X 104637132 104727513 + MGP_129S1SvImJ_P0097232 Fam46d protein_coding protein_coding MGP_129S1SvImJ_T0097233.1 MGP_129S1SvImJ_G0036017.1 mouse_genomes_project X 104661816 104725163 + MGP_129S1SvImJ_P0097233 Fam46d protein_coding protein_coding MGP_129S1SvImJ_T0097234.1 MGP_129S1SvImJ_G0036017.1 mouse_genomes_project X 104661911 104727513 + MGP_129S1SvImJ_P0097234 Fam46d protein_coding protein_coding MGP_129S1SvImJ_T0097235.1 MGP_129S1SvImJ_G0036017.1 mouse_genomes_project X 104661911 104725004 + MGP_129S1SvImJ_P0097235 Fam46d protein_coding protein_coding MGP_129S1SvImJ_T0102866.1 MGP_129S1SvImJ_G0040698.1 mouse_genomes_project X 87932547 87933466 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0016684.1 MGP_129S1SvImJ_G0014773.1 mouse_genomes_project X 114721635 114724970 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097858.1 MGP_129S1SvImJ_G0036194.1 mouse_genomes_project X 151048324 151189117 + MGP_129S1SvImJ_P0097858 Klf8 protein_coding protein_coding MGP_129S1SvImJ_T0097859.1 MGP_129S1SvImJ_G0036194.1 mouse_genomes_project X 151188825 151210876 + MGP_129S1SvImJ_P0097859 Klf8 protein_coding protein_coding MGP_129S1SvImJ_T0098694.1 MGP_129S1SvImJ_G0036779.1 mouse_genomes_project X 157345545 157345654 + Gm23806 rRNA rRNA MGP_129S1SvImJ_T0096348.1 MGP_129S1SvImJ_G0035804.1 mouse_genomes_project X 68985826 68995628 - MGP_129S1SvImJ_P0096348 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0096349.1 MGP_129S1SvImJ_G0035804.1 mouse_genomes_project X 68995426 69005788 - protein_coding retained_intron MGP_129S1SvImJ_T0101789.1 MGP_129S1SvImJ_G0039760.1 mouse_genomes_project X 2750646 2751466 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0011804.1 MGP_129S1SvImJ_G0009920.1 mouse_genomes_project X 160704524 160704839 + Gm25557 misc_RNA misc_RNA MGP_129S1SvImJ_T0016734.1 MGP_129S1SvImJ_G0014823.1 mouse_genomes_project X 130546738 130547474 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095731.1 MGP_129S1SvImJ_G0035586.1 mouse_genomes_project X 13304686 13353363 - 4930578C19Rik protein_coding processed_transcript MGP_129S1SvImJ_T0095732.1 MGP_129S1SvImJ_G0035586.1 mouse_genomes_project X 13308232 13353337 - MGP_129S1SvImJ_P0095732 4930578C19Rik protein_coding protein_coding MGP_129S1SvImJ_T0011211.1 MGP_129S1SvImJ_G0009327.1 mouse_genomes_project X 90806654 90806764 - Gm44477 miRNA miRNA MGP_129S1SvImJ_T0011166.1 MGP_129S1SvImJ_G0009282.1 mouse_genomes_project X 48292962 48293044 - Mir450b miRNA miRNA MGP_129S1SvImJ_T0016810.1 MGP_129S1SvImJ_G0014899.1 mouse_genomes_project X 142111839 142112966 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097742.1 MGP_129S1SvImJ_G0036172.1 mouse_genomes_project X 148527657 148535630 - MGP_129S1SvImJ_P0097742 Maged2 protein_coding protein_coding MGP_129S1SvImJ_T0097743.1 MGP_129S1SvImJ_G0036172.1 mouse_genomes_project X 148527708 148534253 - Maged2 protein_coding retained_intron MGP_129S1SvImJ_T0097744.1 MGP_129S1SvImJ_G0036172.1 mouse_genomes_project X 148527708 148534992 - MGP_129S1SvImJ_P0097744 Maged2 protein_coding protein_coding MGP_129S1SvImJ_T0097745.1 MGP_129S1SvImJ_G0036172.1 mouse_genomes_project X 148527711 148535554 - MGP_129S1SvImJ_P0097745 Maged2 protein_coding protein_coding MGP_129S1SvImJ_T0097746.1 MGP_129S1SvImJ_G0036172.1 mouse_genomes_project X 148528004 148534000 - MGP_129S1SvImJ_P0097746 Maged2 protein_coding protein_coding MGP_129S1SvImJ_T0097747.1 MGP_129S1SvImJ_G0036172.1 mouse_genomes_project X 148532161 148534363 - MGP_129S1SvImJ_P0097747 Maged2 protein_coding protein_coding MGP_129S1SvImJ_T0097748.1 MGP_129S1SvImJ_G0036172.1 mouse_genomes_project X 148532178 148534439 - MGP_129S1SvImJ_P0097748 Maged2 protein_coding protein_coding MGP_129S1SvImJ_T0097749.1 MGP_129S1SvImJ_G0036172.1 mouse_genomes_project X 148532387 148533749 - Maged2 protein_coding processed_transcript MGP_129S1SvImJ_T0097750.1 MGP_129S1SvImJ_G0036172.1 mouse_genomes_project X 148532425 148535566 - MGP_129S1SvImJ_P0097750 Maged2 protein_coding protein_coding MGP_129S1SvImJ_T0097751.1 MGP_129S1SvImJ_G0036172.1 mouse_genomes_project X 148533162 148534243 - MGP_129S1SvImJ_P0097751 Maged2 protein_coding protein_coding MGP_129S1SvImJ_T0016451.1 MGP_129S1SvImJ_G0014540.1 mouse_genomes_project X 74262337 74262857 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016402.1 MGP_129S1SvImJ_G0014491.1 mouse_genomes_project X 63934320 63934933 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095791.1 MGP_129S1SvImJ_G0035600.1 mouse_genomes_project X 15828672 15834774 - MGP_129S1SvImJ_P0095791 Cfp protein_coding protein_coding MGP_129S1SvImJ_T0095792.1 MGP_129S1SvImJ_G0035600.1 mouse_genomes_project X 15828869 15830833 - Cfp protein_coding processed_transcript MGP_129S1SvImJ_T0011218.1 MGP_129S1SvImJ_G0009334.1 mouse_genomes_project X 100237830 100237925 - Mir374b miRNA miRNA MGP_129S1SvImJ_T0016495.1 MGP_129S1SvImJ_G0014584.1 mouse_genomes_project X 84971790 84971982 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095869.1 MGP_129S1SvImJ_G0035628.1 mouse_genomes_project X 31848324 31932848 - MGP_129S1SvImJ_P0095869 Sept6 protein_coding protein_coding MGP_129S1SvImJ_T0095870.1 MGP_129S1SvImJ_G0035628.1 mouse_genomes_project X 31850444 31932848 - MGP_129S1SvImJ_P0095870 Sept6 protein_coding protein_coding MGP_129S1SvImJ_T0095871.1 MGP_129S1SvImJ_G0035628.1 mouse_genomes_project X 31852029 31932848 - MGP_129S1SvImJ_P0095871 Sept6 protein_coding protein_coding MGP_129S1SvImJ_T0095872.1 MGP_129S1SvImJ_G0035628.1 mouse_genomes_project X 31909799 31934982 - MGP_129S1SvImJ_P0095872 Sept6 protein_coding protein_coding MGP_129S1SvImJ_T0095873.1 MGP_129S1SvImJ_G0035628.1 mouse_genomes_project X 31915105 31932683 - Sept6 protein_coding retained_intron MGP_129S1SvImJ_T0095801.1 MGP_129S1SvImJ_G0035603.1 mouse_genomes_project X 15937378 15973768 - MGP_129S1SvImJ_P0095801 Zfp182 protein_coding protein_coding MGP_129S1SvImJ_T0095802.1 MGP_129S1SvImJ_G0035603.1 mouse_genomes_project X 15937382 15973817 - MGP_129S1SvImJ_P0095802 Zfp182 protein_coding protein_coding MGP_129S1SvImJ_T0095803.1 MGP_129S1SvImJ_G0035603.1 mouse_genomes_project X 15938028 15973751 - MGP_129S1SvImJ_P0095803 Zfp182 protein_coding protein_coding MGP_129S1SvImJ_T0095804.1 MGP_129S1SvImJ_G0035603.1 mouse_genomes_project X 15940028 15974081 - Zfp182 protein_coding processed_transcript MGP_129S1SvImJ_T0095805.1 MGP_129S1SvImJ_G0035603.1 mouse_genomes_project X 15969442 15973808 - Zfp182 protein_coding processed_transcript MGP_129S1SvImJ_T0097786.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149553262 149555168 + Huwe1 protein_coding processed_transcript MGP_129S1SvImJ_T0097787.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149553787 149557416 + Huwe1 protein_coding processed_transcript MGP_129S1SvImJ_T0097788.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149554157 149688073 + MGP_129S1SvImJ_P0097788 Huwe1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0097789.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149554218 149559765 + Huwe1 protein_coding processed_transcript MGP_129S1SvImJ_T0097790.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149556147 149625863 + MGP_129S1SvImJ_P0097790 Huwe1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097791.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149556165 149559765 + Huwe1 protein_coding processed_transcript MGP_129S1SvImJ_T0097792.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149556231 149606121 + Huwe1 protein_coding retained_intron MGP_129S1SvImJ_T0097793.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149556231 149688071 + MGP_129S1SvImJ_P0097793 Huwe1 protein_coding protein_coding MGP_129S1SvImJ_T0097794.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149556251 149613466 + Huwe1 protein_coding retained_intron MGP_129S1SvImJ_T0097795.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149556251 149626378 + Huwe1 protein_coding retained_intron MGP_129S1SvImJ_T0097796.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149556562 149588196 + MGP_129S1SvImJ_P0097796 Huwe1 protein_coding protein_coding MGP_129S1SvImJ_T0097797.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149556566 149600509 + Huwe1 protein_coding processed_transcript MGP_129S1SvImJ_T0097798.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149556566 149625056 + Huwe1 protein_coding retained_intron MGP_129S1SvImJ_T0097799.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149556566 149593028 + MGP_129S1SvImJ_P0097799 Huwe1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097800.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149588167 149688071 + MGP_129S1SvImJ_P0097800 Huwe1 protein_coding protein_coding MGP_129S1SvImJ_T0097801.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149613086 149643981 + MGP_129S1SvImJ_P0097801 Huwe1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097802.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149617422 149626732 + MGP_129S1SvImJ_P0097802 Huwe1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097803.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149635415 149636130 + Huwe1 protein_coding processed_transcript MGP_129S1SvImJ_T0097804.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149657858 149662782 + Huwe1 protein_coding retained_intron MGP_129S1SvImJ_T0097805.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149661709 149663254 + Huwe1 protein_coding retained_intron MGP_129S1SvImJ_T0097806.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149661709 149663057 + Huwe1 protein_coding retained_intron MGP_129S1SvImJ_T0097807.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149674143 149675474 + Huwe1 protein_coding retained_intron MGP_129S1SvImJ_T0097808.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149674204 149676595 + Huwe1 protein_coding retained_intron MGP_129S1SvImJ_T0097809.1 MGP_129S1SvImJ_G0036179.1 mouse_genomes_project X 149677119 149680546 + Huwe1 protein_coding retained_intron MGP_129S1SvImJ_T0097252.1 MGP_129S1SvImJ_G0036026.1 mouse_genomes_project X 108005846 108006200 + MGP_129S1SvImJ_P0097252 Gm10112 protein_coding protein_coding MGP_129S1SvImJ_T0016688.1 MGP_129S1SvImJ_G0014777.1 mouse_genomes_project X 115535211 115536320 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016598.1 MGP_129S1SvImJ_G0014687.1 mouse_genomes_project X 100185942 100186167 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016864.1 MGP_129S1SvImJ_G0014953.1 mouse_genomes_project X 154551663 154552132 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096181.1 MGP_129S1SvImJ_G0035745.1 mouse_genomes_project X 52405439 52425742 + MGP_129S1SvImJ_P0096181 Vgll1 protein_coding protein_coding MGP_129S1SvImJ_T0096182.1 MGP_129S1SvImJ_G0035745.1 mouse_genomes_project X 52406645 52424731 + MGP_129S1SvImJ_P0096182 Vgll1 protein_coding protein_coding MGP_129S1SvImJ_T0096183.1 MGP_129S1SvImJ_G0035745.1 mouse_genomes_project X 52406707 52425742 + MGP_129S1SvImJ_P0096183 Vgll1 protein_coding protein_coding MGP_129S1SvImJ_T0096184.1 MGP_129S1SvImJ_G0035745.1 mouse_genomes_project X 52418111 52420550 + MGP_129S1SvImJ_P0096184 Vgll1 protein_coding protein_coding MGP_129S1SvImJ_T0097202.1 MGP_129S1SvImJ_G0036007.1 mouse_genomes_project X 103408238 103438198 - MGP_129S1SvImJ_P0097202 Cysltr1 protein_coding protein_coding MGP_129S1SvImJ_T0097203.1 MGP_129S1SvImJ_G0036007.1 mouse_genomes_project X 103411712 103414754 - MGP_129S1SvImJ_P0097203 Cysltr1 protein_coding protein_coding MGP_129S1SvImJ_T0096938.1 MGP_129S1SvImJ_G0035935.1 mouse_genomes_project X 95557308 95570147 + MGP_129S1SvImJ_P0096938 Efnb1 protein_coding protein_coding MGP_129S1SvImJ_T0096939.1 MGP_129S1SvImJ_G0035935.1 mouse_genomes_project X 95559312 95568386 + Efnb1 protein_coding processed_transcript MGP_129S1SvImJ_T0097151.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102565524 102709225 - MGP_129S1SvImJ_P0097151 Atrx protein_coding protein_coding MGP_129S1SvImJ_T0097152.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102568326 102569960 - Atrx protein_coding retained_intron MGP_129S1SvImJ_T0097153.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102569659 102571709 - Atrx protein_coding retained_intron MGP_129S1SvImJ_T0097154.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102585946 102593504 - MGP_129S1SvImJ_P0097154 Atrx protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097155.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102585972 102597168 - Atrx protein_coding processed_transcript MGP_129S1SvImJ_T0097156.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102593764 102605791 - MGP_129S1SvImJ_P0097156 Atrx protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097157.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102605543 102614489 - Atrx protein_coding retained_intron MGP_129S1SvImJ_T0097158.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102605898 102614673 - Atrx protein_coding retained_intron MGP_129S1SvImJ_T0097159.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102614099 102619541 - Atrx protein_coding retained_intron MGP_129S1SvImJ_T0097160.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102614452 102619253 - Atrx protein_coding retained_intron MGP_129S1SvImJ_T0097161.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102619163 102651418 - Atrx protein_coding retained_intron MGP_129S1SvImJ_T0097162.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102619729 102651749 - MGP_129S1SvImJ_P0097162 Atrx protein_coding protein_coding MGP_129S1SvImJ_T0097163.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102624335 102663973 - MGP_129S1SvImJ_P0097163 Atrx protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097164.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102641029 102651459 - MGP_129S1SvImJ_P0097164 Atrx protein_coding protein_coding MGP_129S1SvImJ_T0097165.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102651283 102709188 - MGP_129S1SvImJ_P0097165 Atrx protein_coding protein_coding MGP_129S1SvImJ_T0097166.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102652661 102709164 - MGP_129S1SvImJ_P0097166 Atrx protein_coding protein_coding MGP_129S1SvImJ_T0097167.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102653113 102709192 - MGP_129S1SvImJ_P0097167 Atrx protein_coding protein_coding MGP_129S1SvImJ_T0097168.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102653113 102709172 - MGP_129S1SvImJ_P0097168 Atrx protein_coding protein_coding MGP_129S1SvImJ_T0097169.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102653393 102709189 - MGP_129S1SvImJ_P0097169 Atrx protein_coding protein_coding MGP_129S1SvImJ_T0097170.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102653594 102709181 - MGP_129S1SvImJ_P0097170 Atrx protein_coding protein_coding MGP_129S1SvImJ_T0097171.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102653633 102709169 - MGP_129S1SvImJ_P0097171 Atrx protein_coding protein_coding MGP_129S1SvImJ_T0097172.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102654518 102656537 - Atrx protein_coding retained_intron MGP_129S1SvImJ_T0097173.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102654538 102709060 - MGP_129S1SvImJ_P0097173 Atrx protein_coding protein_coding MGP_129S1SvImJ_T0097174.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102658104 102708455 - MGP_129S1SvImJ_P0097174 Atrx protein_coding protein_coding MGP_129S1SvImJ_T0097175.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102660505 102709125 - MGP_129S1SvImJ_P0097175 Atrx protein_coding protein_coding MGP_129S1SvImJ_T0097176.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102663930 102709219 - MGP_129S1SvImJ_P0097176 Atrx protein_coding protein_coding MGP_129S1SvImJ_T0097177.1 MGP_129S1SvImJ_G0035999.1 mouse_genomes_project X 102677572 102709168 - Atrx protein_coding processed_transcript MGP_129S1SvImJ_T0100285.1 MGP_129S1SvImJ_G0038352.1 mouse_genomes_project X 138239646 138239753 + Gm23199 snRNA snRNA MGP_129S1SvImJ_T0095888.1 MGP_129S1SvImJ_G0035638.1 mouse_genomes_project X 32205016 32209690 + MGP_129S1SvImJ_P0095888 Rhox2g protein_coding protein_coding MGP_129S1SvImJ_T0016496.1 MGP_129S1SvImJ_G0014585.1 mouse_genomes_project X 84977900 84979022 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016355.1 MGP_129S1SvImJ_G0014444.1 mouse_genomes_project X 54550183 54550859 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097479.1 MGP_129S1SvImJ_G0036102.1 mouse_genomes_project X 134118335 134121832 + MGP_129S1SvImJ_P0097479 Tceal1 protein_coding protein_coding MGP_129S1SvImJ_T0016612.1 MGP_129S1SvImJ_G0014701.1 mouse_genomes_project X 101785138 101785919 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016674.1 MGP_129S1SvImJ_G0014763.1 mouse_genomes_project X 113689753 113690056 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097480.1 MGP_129S1SvImJ_G0036103.1 mouse_genomes_project X 134143274 134152712 - MGP_129S1SvImJ_P0097480 Morf4l2 protein_coding protein_coding MGP_129S1SvImJ_T0097481.1 MGP_129S1SvImJ_G0036103.1 mouse_genomes_project X 134143274 134154738 - MGP_129S1SvImJ_P0097481 Morf4l2 protein_coding protein_coding MGP_129S1SvImJ_T0097482.1 MGP_129S1SvImJ_G0036103.1 mouse_genomes_project X 134143285 134152403 - MGP_129S1SvImJ_P0097482 Morf4l2 protein_coding protein_coding MGP_129S1SvImJ_T0097483.1 MGP_129S1SvImJ_G0036103.1 mouse_genomes_project X 134143285 134152403 - MGP_129S1SvImJ_P0097483 Morf4l2 protein_coding protein_coding MGP_129S1SvImJ_T0097484.1 MGP_129S1SvImJ_G0036103.1 mouse_genomes_project X 134143285 134152206 - MGP_129S1SvImJ_P0097484 Morf4l2 protein_coding protein_coding MGP_129S1SvImJ_T0097485.1 MGP_129S1SvImJ_G0036103.1 mouse_genomes_project X 134143285 134153969 - MGP_129S1SvImJ_P0097485 Morf4l2 protein_coding protein_coding MGP_129S1SvImJ_T0097486.1 MGP_129S1SvImJ_G0036103.1 mouse_genomes_project X 134143285 134154734 - MGP_129S1SvImJ_P0097486 Morf4l2 protein_coding protein_coding MGP_129S1SvImJ_T0097487.1 MGP_129S1SvImJ_G0036103.1 mouse_genomes_project X 134144342 134152400 - MGP_129S1SvImJ_P0097487 Morf4l2 protein_coding protein_coding MGP_129S1SvImJ_T0097488.1 MGP_129S1SvImJ_G0036103.1 mouse_genomes_project X 134144371 134153912 - MGP_129S1SvImJ_P0097488 Morf4l2 protein_coding protein_coding MGP_129S1SvImJ_T0097489.1 MGP_129S1SvImJ_G0036103.1 mouse_genomes_project X 134144461 134152206 - MGP_129S1SvImJ_P0097489 Morf4l2 protein_coding protein_coding MGP_129S1SvImJ_T0097490.1 MGP_129S1SvImJ_G0036103.1 mouse_genomes_project X 134145324 134153940 - MGP_129S1SvImJ_P0097490 Morf4l2 protein_coding protein_coding MGP_129S1SvImJ_T0097491.1 MGP_129S1SvImJ_G0036103.1 mouse_genomes_project X 134145350 134151538 - MGP_129S1SvImJ_P0097491 Morf4l2 protein_coding protein_coding MGP_129S1SvImJ_T0097492.1 MGP_129S1SvImJ_G0036103.1 mouse_genomes_project X 134145352 134153969 - MGP_129S1SvImJ_P0097492 Morf4l2 protein_coding protein_coding MGP_129S1SvImJ_T0097493.1 MGP_129S1SvImJ_G0036103.1 mouse_genomes_project X 134145480 134151534 - MGP_129S1SvImJ_P0097493 Morf4l2 protein_coding protein_coding MGP_129S1SvImJ_T0097494.1 MGP_129S1SvImJ_G0036103.1 mouse_genomes_project X 134146648 134152327 - Morf4l2 protein_coding processed_transcript MGP_129S1SvImJ_T0016585.1 MGP_129S1SvImJ_G0014674.1 mouse_genomes_project X 99634900 99635590 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009449.1 MGP_129S1SvImJ_G0007577.1 mouse_genomes_project X 165012133 165018914 - Gm15230 lincRNA lincRNA MGP_129S1SvImJ_T0098769.1 MGP_129S1SvImJ_G0036854.1 mouse_genomes_project X 112202955 112203336 + Gm27414 scaRNA scaRNA MGP_129S1SvImJ_T0100272.1 MGP_129S1SvImJ_G0038339.1 mouse_genomes_project X 105881651 105881758 - Gm25797 snRNA snRNA MGP_129S1SvImJ_T0098696.1 MGP_129S1SvImJ_G0036781.1 mouse_genomes_project X 162212244 162212365 + n-R5s18 rRNA rRNA MGP_129S1SvImJ_T0011201.1 MGP_129S1SvImJ_G0009317.1 mouse_genomes_project X 68280178 68280285 - Mir767 miRNA miRNA MGP_129S1SvImJ_T0016781.1 MGP_129S1SvImJ_G0014870.1 mouse_genomes_project X 138917159 138917375 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016478.1 MGP_129S1SvImJ_G0014567.1 mouse_genomes_project X 81803099 81803685 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018715.1 MGP_129S1SvImJ_G0015795.1 mouse_genomes_project X 136716834 136850214 - Platr21 processed_transcript processed_transcript MGP_129S1SvImJ_T0018716.1 MGP_129S1SvImJ_G0015795.1 mouse_genomes_project X 136840934 136851182 - Platr21 processed_transcript processed_transcript MGP_129S1SvImJ_T0100274.1 MGP_129S1SvImJ_G0038341.1 mouse_genomes_project X 110092200 110092326 - Gm24831 snRNA snRNA MGP_129S1SvImJ_T0016727.1 MGP_129S1SvImJ_G0014816.1 mouse_genomes_project X 128960010 128962717 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016189.1 MGP_129S1SvImJ_G0014278.1 mouse_genomes_project X 2157268 2157563 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101508.1 MGP_129S1SvImJ_G0039575.1 mouse_genomes_project X 31699334 31699421 + Gm23613 snoRNA snoRNA MGP_129S1SvImJ_T0096069.1 MGP_129S1SvImJ_G0035699.1 mouse_genomes_project X 44022715 44054757 - MGP_129S1SvImJ_P0096069 Gm595 protein_coding protein_coding MGP_129S1SvImJ_T0098688.1 MGP_129S1SvImJ_G0036773.1 mouse_genomes_project X 133648795 133648914 + n-R5s12 rRNA rRNA MGP_129S1SvImJ_T0016375.1 MGP_129S1SvImJ_G0014464.1 mouse_genomes_project X 57532438 57533668 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016813.1 MGP_129S1SvImJ_G0014902.1 mouse_genomes_project X 142820832 142821528 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016258.1 MGP_129S1SvImJ_G0014347.1 mouse_genomes_project X 16056345 16057142 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011139.1 MGP_129S1SvImJ_G0009255.1 mouse_genomes_project X 1831518 1831583 - Mir362 miRNA miRNA MGP_129S1SvImJ_T0096198.1 MGP_129S1SvImJ_G0035749.1 mouse_genomes_project X 52743399 52831343 + MGP_129S1SvImJ_P0096198 Gm364 protein_coding protein_coding MGP_129S1SvImJ_T0096138.1 MGP_129S1SvImJ_G0035728.1 mouse_genomes_project X 48908423 48909558 - MGP_129S1SvImJ_P0096138 Cxx1b protein_coding protein_coding MGP_129S1SvImJ_T0016359.1 MGP_129S1SvImJ_G0014448.1 mouse_genomes_project X 55917480 55918311 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016405.1 MGP_129S1SvImJ_G0014494.1 mouse_genomes_project X 64390797 64391025 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016887.1 MGP_129S1SvImJ_G0014976.1 mouse_genomes_project X 157494115 157494678 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011250.1 MGP_129S1SvImJ_G0009366.1 mouse_genomes_project X 165190878 165190987 - Gm22368 miRNA miRNA MGP_129S1SvImJ_T0097654.1 MGP_129S1SvImJ_G0036157.1 mouse_genomes_project X 141419534 141498334 - MGP_129S1SvImJ_P0097654 Dcx protein_coding protein_coding MGP_129S1SvImJ_T0097655.1 MGP_129S1SvImJ_G0036157.1 mouse_genomes_project X 141424410 141498227 - MGP_129S1SvImJ_P0097655 Dcx protein_coding protein_coding MGP_129S1SvImJ_T0097656.1 MGP_129S1SvImJ_G0036157.1 mouse_genomes_project X 141425463 141498147 - MGP_129S1SvImJ_P0097656 Dcx protein_coding protein_coding MGP_129S1SvImJ_T0097657.1 MGP_129S1SvImJ_G0036157.1 mouse_genomes_project X 141427146 141498242 - MGP_129S1SvImJ_P0097657 Dcx protein_coding protein_coding MGP_129S1SvImJ_T0097658.1 MGP_129S1SvImJ_G0036157.1 mouse_genomes_project X 141433515 141498073 - Dcx protein_coding retained_intron MGP_129S1SvImJ_T0097659.1 MGP_129S1SvImJ_G0036157.1 mouse_genomes_project X 141438033 141498142 - Dcx protein_coding retained_intron MGP_129S1SvImJ_T0016573.1 MGP_129S1SvImJ_G0014662.1 mouse_genomes_project X 98313233 98313740 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097506.1 MGP_129S1SvImJ_G0036110.1 mouse_genomes_project X 134382306 134385477 - MGP_129S1SvImJ_P0097506 protein_coding protein_coding MGP_129S1SvImJ_T0098681.1 MGP_129S1SvImJ_G0036766.1 mouse_genomes_project X 64557992 64558113 - n-R5s7 rRNA rRNA MGP_129S1SvImJ_T0098001.1 MGP_129S1SvImJ_G0036235.1 mouse_genomes_project X 158836539 158841478 - MGP_129S1SvImJ_P0098001 Gja6 protein_coding protein_coding MGP_129S1SvImJ_T0016753.1 MGP_129S1SvImJ_G0014842.1 mouse_genomes_project X 134304424 134304882 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100222.1 MGP_129S1SvImJ_G0038289.1 mouse_genomes_project X 2724681 2724783 + Gm22083 snRNA snRNA MGP_129S1SvImJ_T0016738.1 MGP_129S1SvImJ_G0014827.1 mouse_genomes_project X 131937660 131938091 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101534.1 MGP_129S1SvImJ_G0039601.1 mouse_genomes_project X 113542274 113542389 + Gm24438 snoRNA snoRNA MGP_129S1SvImJ_T0016337.1 MGP_129S1SvImJ_G0014426.1 mouse_genomes_project X 48568568 48569202 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011228.1 MGP_129S1SvImJ_G0009344.1 mouse_genomes_project X 131223733 131223815 + Mir3112 miRNA miRNA MGP_129S1SvImJ_T0095837.1 MGP_129S1SvImJ_G0035617.1 mouse_genomes_project X 31091937 31097789 + MGP_129S1SvImJ_P0095837 Zcchc12 protein_coding protein_coding MGP_129S1SvImJ_T0095838.1 MGP_129S1SvImJ_G0035617.1 mouse_genomes_project X 31091979 31097797 + MGP_129S1SvImJ_P0095838 Zcchc12 protein_coding protein_coding MGP_129S1SvImJ_T0095839.1 MGP_129S1SvImJ_G0035617.1 mouse_genomes_project X 31091992 31097796 + MGP_129S1SvImJ_P0095839 Zcchc12 protein_coding protein_coding MGP_129S1SvImJ_T0095840.1 MGP_129S1SvImJ_G0035617.1 mouse_genomes_project X 31092019 31097796 + MGP_129S1SvImJ_P0095840 Zcchc12 protein_coding protein_coding MGP_129S1SvImJ_T0096934.1 MGP_129S1SvImJ_G0035934.1 mouse_genomes_project X 95415382 95480610 + MGP_129S1SvImJ_P0096934 Stard8 protein_coding protein_coding MGP_129S1SvImJ_T0096935.1 MGP_129S1SvImJ_G0035934.1 mouse_genomes_project X 95457565 95489665 + MGP_129S1SvImJ_P0096935 Stard8 protein_coding protein_coding MGP_129S1SvImJ_T0096936.1 MGP_129S1SvImJ_G0035934.1 mouse_genomes_project X 95458968 95480761 + Stard8 protein_coding processed_transcript MGP_129S1SvImJ_T0096937.1 MGP_129S1SvImJ_G0035934.1 mouse_genomes_project X 95483545 95485382 + Stard8 protein_coding processed_transcript MGP_129S1SvImJ_T0095643.1 MGP_129S1SvImJ_G0035559.1 mouse_genomes_project X 4581795 4582348 + MGP_129S1SvImJ_P0095643 4930557A04Rik protein_coding protein_coding MGP_129S1SvImJ_T0097340.1 MGP_129S1SvImJ_G0036059.1 mouse_genomes_project X 131079240 131105079 - MGP_129S1SvImJ_P0097340 Sytl4 protein_coding protein_coding MGP_129S1SvImJ_T0097341.1 MGP_129S1SvImJ_G0036059.1 mouse_genomes_project X 131089268 131124668 - MGP_129S1SvImJ_P0097341 Sytl4 protein_coding protein_coding MGP_129S1SvImJ_T0097342.1 MGP_129S1SvImJ_G0036059.1 mouse_genomes_project X 131093126 131103834 - Sytl4 protein_coding processed_transcript MGP_129S1SvImJ_T0097343.1 MGP_129S1SvImJ_G0036059.1 mouse_genomes_project X 131095168 131124665 - MGP_129S1SvImJ_P0097343 Sytl4 protein_coding protein_coding MGP_129S1SvImJ_T0101505.1 MGP_129S1SvImJ_G0039572.1 mouse_genomes_project X 1818147 1818223 + Gm26401 snoRNA snoRNA MGP_129S1SvImJ_T0018639.1 MGP_129S1SvImJ_G0015772.1 mouse_genomes_project X 7588851 7652058 + Gm14634 processed_transcript processed_transcript MGP_129S1SvImJ_T0018640.1 MGP_129S1SvImJ_G0015772.1 mouse_genomes_project X 7589117 7648785 + Gm14634 processed_transcript processed_transcript MGP_129S1SvImJ_T0016354.1 MGP_129S1SvImJ_G0014443.1 mouse_genomes_project X 54035226 54035688 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095806.1 MGP_129S1SvImJ_G0035604.1 mouse_genomes_project X 15980171 15983947 + MGP_129S1SvImJ_P0095806 Spaca5 protein_coding protein_coding MGP_129S1SvImJ_T0096696.1 MGP_129S1SvImJ_G0035857.1 mouse_genomes_project X 71226629 71240577 + MGP_129S1SvImJ_P0096696 Fundc2 protein_coding protein_coding MGP_129S1SvImJ_T0096697.1 MGP_129S1SvImJ_G0035857.1 mouse_genomes_project X 71226704 71231403 + Fundc2 protein_coding retained_intron MGP_129S1SvImJ_T0096698.1 MGP_129S1SvImJ_G0035857.1 mouse_genomes_project X 71231026 71238260 + Fundc2 protein_coding processed_transcript MGP_129S1SvImJ_T0016548.1 MGP_129S1SvImJ_G0014637.1 mouse_genomes_project X 92741860 92744843 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096002.1 MGP_129S1SvImJ_G0035681.1 mouse_genomes_project X 39857794 39861422 - MGP_129S1SvImJ_P0096002 Dcaf12l1 protein_coding protein_coding MGP_129S1SvImJ_T0096003.1 MGP_129S1SvImJ_G0035681.1 mouse_genomes_project X 39857794 39861386 - MGP_129S1SvImJ_P0096003 Dcaf12l1 protein_coding protein_coding MGP_129S1SvImJ_T0016197.1 MGP_129S1SvImJ_G0014286.1 mouse_genomes_project X 3289761 3290121 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016762.1 MGP_129S1SvImJ_G0014851.1 mouse_genomes_project X 134561224 134561980 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096001.1 MGP_129S1SvImJ_G0035680.1 mouse_genomes_project X 39429774 39432659 - MGP_129S1SvImJ_P0096001 Dcaf12l2 protein_coding protein_coding MGP_129S1SvImJ_T0011226.1 MGP_129S1SvImJ_G0009342.1 mouse_genomes_project X 109835913 109835983 - Mir361 miRNA miRNA MGP_129S1SvImJ_T0098170.1 MGP_129S1SvImJ_G0036278.1 mouse_genomes_project X 167984628 167989279 - MGP_129S1SvImJ_P0098170 4933400A11Rik protein_coding protein_coding MGP_129S1SvImJ_T0098171.1 MGP_129S1SvImJ_G0036278.1 mouse_genomes_project X 167984749 167989322 - MGP_129S1SvImJ_P0098171 4933400A11Rik protein_coding protein_coding MGP_129S1SvImJ_T0098172.1 MGP_129S1SvImJ_G0036278.1 mouse_genomes_project X 167984796 167989244 - MGP_129S1SvImJ_P0098172 4933400A11Rik protein_coding protein_coding MGP_129S1SvImJ_T0097251.1 MGP_129S1SvImJ_G0036025.1 mouse_genomes_project X 107965406 107978571 + MGP_129S1SvImJ_P0097251 Cylc1 protein_coding protein_coding MGP_129S1SvImJ_T0097453.1 MGP_129S1SvImJ_G0036092.1 mouse_genomes_project X 133422171 133423844 - MGP_129S1SvImJ_P0097453 Bex2 protein_coding protein_coding MGP_129S1SvImJ_T0016797.1 MGP_129S1SvImJ_G0014886.1 mouse_genomes_project X 139931549 139931759 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016836.1 MGP_129S1SvImJ_G0014925.1 mouse_genomes_project X 148892598 148892958 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016570.1 MGP_129S1SvImJ_G0014659.1 mouse_genomes_project X 97995728 97995940 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097224.1 MGP_129S1SvImJ_G0036014.1 mouse_genomes_project X 104236357 104242522 - MGP_129S1SvImJ_P0097224 Itm2a protein_coding protein_coding MGP_129S1SvImJ_T0096396.1 MGP_129S1SvImJ_G0035819.1 mouse_genomes_project X 69549694 69554215 + Srpk3 protein_coding retained_intron MGP_129S1SvImJ_T0096397.1 MGP_129S1SvImJ_G0035819.1 mouse_genomes_project X 69549694 69554215 + MGP_129S1SvImJ_P0096397 Srpk3 protein_coding protein_coding MGP_129S1SvImJ_T0096398.1 MGP_129S1SvImJ_G0035819.1 mouse_genomes_project X 69553234 69553892 + Srpk3 protein_coding retained_intron MGP_129S1SvImJ_T0096399.1 MGP_129S1SvImJ_G0035819.1 mouse_genomes_project X 69553267 69554018 + Srpk3 protein_coding retained_intron MGP_129S1SvImJ_T0016309.1 MGP_129S1SvImJ_G0014398.1 mouse_genomes_project X 39533834 39534229 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095994.1 MGP_129S1SvImJ_G0035678.1 mouse_genomes_project X 37597700 38242375 - MGP_129S1SvImJ_P0095994 Tenm1 protein_coding protein_coding MGP_129S1SvImJ_T0095995.1 MGP_129S1SvImJ_G0035678.1 mouse_genomes_project X 37597700 38242396 - MGP_129S1SvImJ_P0095995 Tenm1 protein_coding protein_coding MGP_129S1SvImJ_T0095996.1 MGP_129S1SvImJ_G0035678.1 mouse_genomes_project X 37602225 38345488 - MGP_129S1SvImJ_P0095996 Tenm1 protein_coding protein_coding MGP_129S1SvImJ_T0095997.1 MGP_129S1SvImJ_G0035678.1 mouse_genomes_project X 37889684 38501641 - Tenm1 protein_coding retained_intron MGP_129S1SvImJ_T0095998.1 MGP_129S1SvImJ_G0035678.1 mouse_genomes_project X 37970331 38501764 - Tenm1 protein_coding retained_intron MGP_129S1SvImJ_T0095999.1 MGP_129S1SvImJ_G0035678.1 mouse_genomes_project X 38394643 38501641 - Tenm1 protein_coding processed_transcript MGP_129S1SvImJ_T0016536.1 MGP_129S1SvImJ_G0014625.1 mouse_genomes_project X 91039453 91039779 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016391.1 MGP_129S1SvImJ_G0014480.1 mouse_genomes_project X 61607184 61607446 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096505.1 MGP_129S1SvImJ_G0035830.1 mouse_genomes_project X 69811826 69870701 - MGP_129S1SvImJ_P0096505 Mecp2 protein_coding protein_coding MGP_129S1SvImJ_T0096506.1 MGP_129S1SvImJ_G0035830.1 mouse_genomes_project X 69812062 69865065 - MGP_129S1SvImJ_P0096506 Mecp2 protein_coding protein_coding MGP_129S1SvImJ_T0096507.1 MGP_129S1SvImJ_G0035830.1 mouse_genomes_project X 69820523 69870722 - MGP_129S1SvImJ_P0096507 Mecp2 protein_coding protein_coding MGP_129S1SvImJ_T0096508.1 MGP_129S1SvImJ_G0035830.1 mouse_genomes_project X 69820524 69870644 - MGP_129S1SvImJ_P0096508 Mecp2 protein_coding protein_coding MGP_129S1SvImJ_T0096509.1 MGP_129S1SvImJ_G0035830.1 mouse_genomes_project X 69820905 69870642 - MGP_129S1SvImJ_P0096509 Mecp2 protein_coding protein_coding MGP_129S1SvImJ_T0096510.1 MGP_129S1SvImJ_G0035830.1 mouse_genomes_project X 69866062 69870629 - Mecp2 protein_coding retained_intron MGP_129S1SvImJ_T0101537.1 MGP_129S1SvImJ_G0039604.1 mouse_genomes_project X 118584875 118585011 + Gm23277 snoRNA snoRNA MGP_129S1SvImJ_T0097454.1 MGP_129S1SvImJ_G0036093.1 mouse_genomes_project X 133429806 133447929 - MGP_129S1SvImJ_P0097454 Nxf3 protein_coding protein_coding MGP_129S1SvImJ_T0097455.1 MGP_129S1SvImJ_G0036093.1 mouse_genomes_project X 133437318 133447916 - MGP_129S1SvImJ_P0097455 Nxf3 protein_coding protein_coding MGP_129S1SvImJ_T0016675.1 MGP_129S1SvImJ_G0014764.1 mouse_genomes_project X 113699863 113700253 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016187.1 MGP_129S1SvImJ_G0014276.1 mouse_genomes_project X 2124269 2124683 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101806.1 MGP_129S1SvImJ_G0039771.1 mouse_genomes_project X 100446261 100446890 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101807.1 MGP_129S1SvImJ_G0039771.1 mouse_genomes_project X 100446365 100446761 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0016919.1 MGP_129S1SvImJ_G0015008.1 mouse_genomes_project X 165190891 165191426 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096090.1 MGP_129S1SvImJ_G0035708.1 mouse_genomes_project X 45985932 46038484 + MGP_129S1SvImJ_P0096090 Stk26 protein_coding protein_coding MGP_129S1SvImJ_T0096091.1 MGP_129S1SvImJ_G0035708.1 mouse_genomes_project X 45986326 46024770 + Stk26 protein_coding retained_intron MGP_129S1SvImJ_T0096092.1 MGP_129S1SvImJ_G0035708.1 mouse_genomes_project X 45986326 46038484 + MGP_129S1SvImJ_P0096092 Stk26 protein_coding protein_coding MGP_129S1SvImJ_T0096093.1 MGP_129S1SvImJ_G0035708.1 mouse_genomes_project X 46023083 46036544 + Stk26 protein_coding retained_intron MGP_129S1SvImJ_T0018648.1 MGP_129S1SvImJ_G0015777.1 mouse_genomes_project X 45696756 45781852 - processed_transcript processed_transcript MGP_129S1SvImJ_T0018649.1 MGP_129S1SvImJ_G0015777.1 mouse_genomes_project X 45696756 45705813 - processed_transcript processed_transcript MGP_129S1SvImJ_T0018650.1 MGP_129S1SvImJ_G0015777.1 mouse_genomes_project X 45696763 45703801 - processed_transcript processed_transcript MGP_129S1SvImJ_T0018651.1 MGP_129S1SvImJ_G0015777.1 mouse_genomes_project X 45699280 45701958 - processed_transcript processed_transcript MGP_129S1SvImJ_T0018652.1 MGP_129S1SvImJ_G0015777.1 mouse_genomes_project X 45700589 45740480 - processed_transcript processed_transcript MGP_129S1SvImJ_T0018653.1 MGP_129S1SvImJ_G0015777.1 mouse_genomes_project X 45767288 45781894 - processed_transcript processed_transcript MGP_129S1SvImJ_T0018654.1 MGP_129S1SvImJ_G0015777.1 mouse_genomes_project X 45773041 45781912 - processed_transcript processed_transcript MGP_129S1SvImJ_T0018655.1 MGP_129S1SvImJ_G0015777.1 mouse_genomes_project X 45773041 45781902 - processed_transcript processed_transcript MGP_129S1SvImJ_T0096981.1 MGP_129S1SvImJ_G0035948.1 mouse_genomes_project X 97193152 97195727 + Gdpd2 protein_coding processed_transcript MGP_129S1SvImJ_T0096982.1 MGP_129S1SvImJ_G0035948.1 mouse_genomes_project X 97193217 97198492 + Gdpd2 protein_coding retained_intron MGP_129S1SvImJ_T0096983.1 MGP_129S1SvImJ_G0035948.1 mouse_genomes_project X 97193221 97202173 + MGP_129S1SvImJ_P0096983 Gdpd2 protein_coding protein_coding MGP_129S1SvImJ_T0096984.1 MGP_129S1SvImJ_G0035948.1 mouse_genomes_project X 97193465 97202173 + MGP_129S1SvImJ_P0096984 Gdpd2 protein_coding protein_coding MGP_129S1SvImJ_T0096985.1 MGP_129S1SvImJ_G0035948.1 mouse_genomes_project X 97199618 97202174 + Gdpd2 protein_coding retained_intron MGP_129S1SvImJ_T0016252.1 MGP_129S1SvImJ_G0014341.1 mouse_genomes_project X 15259211 15260283 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016221.1 MGP_129S1SvImJ_G0014310.1 mouse_genomes_project X 7475506 7475866 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097431.1 MGP_129S1SvImJ_G0036085.1 mouse_genomes_project X 132918813 132940961 - MGP_129S1SvImJ_P0097431 protein_coding protein_coding MGP_129S1SvImJ_T0097432.1 MGP_129S1SvImJ_G0036085.1 mouse_genomes_project X 132918813 132931169 - MGP_129S1SvImJ_P0097432 protein_coding protein_coding MGP_129S1SvImJ_T0097433.1 MGP_129S1SvImJ_G0036085.1 mouse_genomes_project X 132920698 132936044 - MGP_129S1SvImJ_P0097433 protein_coding protein_coding MGP_129S1SvImJ_T0097434.1 MGP_129S1SvImJ_G0036085.1 mouse_genomes_project X 132925283 132927037 - protein_coding retained_intron MGP_129S1SvImJ_T0097435.1 MGP_129S1SvImJ_G0036085.1 mouse_genomes_project X 132930631 132940942 - MGP_129S1SvImJ_P0097435 protein_coding protein_coding MGP_129S1SvImJ_T0097436.1 MGP_129S1SvImJ_G0036085.1 mouse_genomes_project X 132930814 132938892 - MGP_129S1SvImJ_P0097436 protein_coding protein_coding MGP_129S1SvImJ_T0011217.1 MGP_129S1SvImJ_G0009333.1 mouse_genomes_project X 100237691 100237767 - Mir421 miRNA miRNA MGP_129S1SvImJ_T0016634.1 MGP_129S1SvImJ_G0014723.1 mouse_genomes_project X 104922965 104927788 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002505.1 MGP_129S1SvImJ_G0002414.1 mouse_genomes_project X 150059479 150060955 - TEC TEC MGP_129S1SvImJ_T0101810.1 MGP_129S1SvImJ_G0039773.1 mouse_genomes_project X 104385214 104386433 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101811.1 MGP_129S1SvImJ_G0039773.1 mouse_genomes_project X 104385223 104386378 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0096592.1 MGP_129S1SvImJ_G0035840.1 mouse_genomes_project X 70104459 70111326 + MGP_129S1SvImJ_P0096592 Gdi1 protein_coding protein_coding MGP_129S1SvImJ_T0096593.1 MGP_129S1SvImJ_G0035840.1 mouse_genomes_project X 70104473 70111324 + Gdi1 protein_coding retained_intron MGP_129S1SvImJ_T0096594.1 MGP_129S1SvImJ_G0035840.1 mouse_genomes_project X 70104717 70106490 + Gdi1 protein_coding processed_transcript MGP_129S1SvImJ_T0096595.1 MGP_129S1SvImJ_G0035840.1 mouse_genomes_project X 70104728 70111322 + Gdi1 protein_coding retained_intron MGP_129S1SvImJ_T0096596.1 MGP_129S1SvImJ_G0035840.1 mouse_genomes_project X 70104774 70106627 + MGP_129S1SvImJ_P0096596 Gdi1 protein_coding protein_coding MGP_129S1SvImJ_T0096597.1 MGP_129S1SvImJ_G0035840.1 mouse_genomes_project X 70105289 70106668 + Gdi1 protein_coding processed_transcript MGP_129S1SvImJ_T0096598.1 MGP_129S1SvImJ_G0035840.1 mouse_genomes_project X 70106631 70109045 + Gdi1 protein_coding retained_intron MGP_129S1SvImJ_T0096599.1 MGP_129S1SvImJ_G0035840.1 mouse_genomes_project X 70108638 70110634 + MGP_129S1SvImJ_P0096599 Gdi1 protein_coding protein_coding MGP_129S1SvImJ_T0096600.1 MGP_129S1SvImJ_G0035840.1 mouse_genomes_project X 70109329 70110414 + Gdi1 protein_coding processed_transcript MGP_129S1SvImJ_T0096601.1 MGP_129S1SvImJ_G0035840.1 mouse_genomes_project X 70109858 70110511 + Gdi1 protein_coding processed_transcript MGP_129S1SvImJ_T0095667.1 MGP_129S1SvImJ_G0035566.1 mouse_genomes_project X 6831356 6876705 - MGP_129S1SvImJ_P0095667 Bcor protein_coding protein_coding MGP_129S1SvImJ_T0095668.1 MGP_129S1SvImJ_G0035566.1 mouse_genomes_project X 6831356 6876705 - MGP_129S1SvImJ_P0095668 Bcor protein_coding protein_coding MGP_129S1SvImJ_T0095669.1 MGP_129S1SvImJ_G0035566.1 mouse_genomes_project X 6831356 6876705 - MGP_129S1SvImJ_P0095669 Bcor protein_coding protein_coding MGP_129S1SvImJ_T0095670.1 MGP_129S1SvImJ_G0035566.1 mouse_genomes_project X 6831356 6876705 - MGP_129S1SvImJ_P0095670 Bcor protein_coding protein_coding MGP_129S1SvImJ_T0095671.1 MGP_129S1SvImJ_G0035566.1 mouse_genomes_project X 6831359 6966120 - MGP_129S1SvImJ_P0095671 Bcor protein_coding protein_coding MGP_129S1SvImJ_T0095672.1 MGP_129S1SvImJ_G0035566.1 mouse_genomes_project X 6854539 6930893 - MGP_129S1SvImJ_P0095672 Bcor protein_coding protein_coding MGP_129S1SvImJ_T0095673.1 MGP_129S1SvImJ_G0035566.1 mouse_genomes_project X 6854629 6930843 - MGP_129S1SvImJ_P0095673 Bcor protein_coding protein_coding MGP_129S1SvImJ_T0009446.1 MGP_129S1SvImJ_G0007574.1 mouse_genomes_project X 159788682 159802615 - Gm15205 lincRNA lincRNA MGP_129S1SvImJ_T0016342.1 MGP_129S1SvImJ_G0014431.1 mouse_genomes_project X 51589074 51589365 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016698.1 MGP_129S1SvImJ_G0014787.1 mouse_genomes_project X 117863982 117865156 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016904.1 MGP_129S1SvImJ_G0014993.1 mouse_genomes_project X 161253606 161254087 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016274.1 MGP_129S1SvImJ_G0014363.1 mouse_genomes_project X 31767923 31768080 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016899.1 MGP_129S1SvImJ_G0014988.1 mouse_genomes_project X 160707906 160708548 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097315.1 MGP_129S1SvImJ_G0036047.1 mouse_genomes_project X 119291963 119294800 - MGP_129S1SvImJ_P0097315 Nap1l3 protein_coding protein_coding MGP_129S1SvImJ_T0005618.1 MGP_129S1SvImJ_G0004737.1 mouse_genomes_project X 90412509 90486295 + Gm14798 antisense antisense MGP_129S1SvImJ_T0096290.1 MGP_129S1SvImJ_G0035782.1 mouse_genomes_project X 67011233 67068975 + MGP_129S1SvImJ_P0096290 Mtmr1 protein_coding protein_coding MGP_129S1SvImJ_T0096291.1 MGP_129S1SvImJ_G0035782.1 mouse_genomes_project X 67011233 67036710 + MGP_129S1SvImJ_P0096291 Mtmr1 protein_coding protein_coding MGP_129S1SvImJ_T0096292.1 MGP_129S1SvImJ_G0035782.1 mouse_genomes_project X 67011410 67042143 + MGP_129S1SvImJ_P0096292 Mtmr1 protein_coding protein_coding MGP_129S1SvImJ_T0096293.1 MGP_129S1SvImJ_G0035782.1 mouse_genomes_project X 67017887 67036688 + MGP_129S1SvImJ_P0096293 Mtmr1 protein_coding protein_coding MGP_129S1SvImJ_T0096294.1 MGP_129S1SvImJ_G0035782.1 mouse_genomes_project X 67017887 67036688 + MGP_129S1SvImJ_P0096294 Mtmr1 protein_coding protein_coding MGP_129S1SvImJ_T0096295.1 MGP_129S1SvImJ_G0035782.1 mouse_genomes_project X 67017887 67036688 + MGP_129S1SvImJ_P0096295 Mtmr1 protein_coding protein_coding MGP_129S1SvImJ_T0096296.1 MGP_129S1SvImJ_G0035782.1 mouse_genomes_project X 67039130 67040480 + Mtmr1 protein_coding retained_intron MGP_129S1SvImJ_T0096297.1 MGP_129S1SvImJ_G0035782.1 mouse_genomes_project X 67039631 67040774 + Mtmr1 protein_coding retained_intron MGP_129S1SvImJ_T0096298.1 MGP_129S1SvImJ_G0035782.1 mouse_genomes_project X 67041836 67068442 + Mtmr1 protein_coding retained_intron MGP_129S1SvImJ_T0016556.1 MGP_129S1SvImJ_G0014645.1 mouse_genomes_project X 94408007 94409892 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098676.1 MGP_129S1SvImJ_G0036761.1 mouse_genomes_project X 5256158 5256267 + Gm25885 rRNA rRNA MGP_129S1SvImJ_T0097077.1 MGP_129S1SvImJ_G0035967.1 mouse_genomes_project X 98402325 98506423 + Nhsl2 protein_coding processed_transcript MGP_129S1SvImJ_T0097078.1 MGP_129S1SvImJ_G0035967.1 mouse_genomes_project X 98402325 98641966 + MGP_129S1SvImJ_P0097078 Nhsl2 protein_coding protein_coding MGP_129S1SvImJ_T0097079.1 MGP_129S1SvImJ_G0035967.1 mouse_genomes_project X 98402325 98658783 + MGP_129S1SvImJ_P0097079 Nhsl2 protein_coding protein_coding MGP_129S1SvImJ_T0097080.1 MGP_129S1SvImJ_G0035967.1 mouse_genomes_project X 98518584 98643571 + Nhsl2 protein_coding processed_transcript MGP_129S1SvImJ_T0097081.1 MGP_129S1SvImJ_G0035967.1 mouse_genomes_project X 98566051 98643546 + MGP_129S1SvImJ_P0097081 Nhsl2 protein_coding protein_coding MGP_129S1SvImJ_T0097082.1 MGP_129S1SvImJ_G0035967.1 mouse_genomes_project X 98615710 98637656 + Nhsl2 protein_coding processed_transcript MGP_129S1SvImJ_T0097086.1 MGP_129S1SvImJ_G0035967.1 mouse_genomes_project X 98638631 98645990 + Nhsl2 protein_coding processed_transcript MGP_129S1SvImJ_T0097207.1 MGP_129S1SvImJ_G0036010.1 mouse_genomes_project X 103734292 103747633 + MGP_129S1SvImJ_P0097207 Lpar4 protein_coding protein_coding MGP_129S1SvImJ_T0096833.1 MGP_129S1SvImJ_G0035908.1 mouse_genomes_project X 90584523 90608579 - MGP_129S1SvImJ_P0096833 Eif2s3x protein_coding protein_coding MGP_129S1SvImJ_T0096834.1 MGP_129S1SvImJ_G0035908.1 mouse_genomes_project X 90595457 90608521 - MGP_129S1SvImJ_P0096834 Eif2s3x protein_coding protein_coding MGP_129S1SvImJ_T0096835.1 MGP_129S1SvImJ_G0035908.1 mouse_genomes_project X 90598699 90608732 - Eif2s3x protein_coding processed_transcript MGP_129S1SvImJ_T0097437.1 MGP_129S1SvImJ_G0036086.1 mouse_genomes_project X 132954682 132974712 - MGP_129S1SvImJ_P0097437 Prame protein_coding protein_coding MGP_129S1SvImJ_T0097438.1 MGP_129S1SvImJ_G0036086.1 mouse_genomes_project X 132954824 132957486 - MGP_129S1SvImJ_P0097438 Prame protein_coding protein_coding MGP_129S1SvImJ_T0016568.1 MGP_129S1SvImJ_G0014657.1 mouse_genomes_project X 97541263 97542062 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016306.1 MGP_129S1SvImJ_G0014395.1 mouse_genomes_project X 38795796 38796514 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016606.1 MGP_129S1SvImJ_G0014695.1 mouse_genomes_project X 100615124 100616573 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011247.1 MGP_129S1SvImJ_G0009363.1 mouse_genomes_project X 149666075 149666183 + Mir98 miRNA miRNA MGP_129S1SvImJ_T0016347.1 MGP_129S1SvImJ_G0014436.1 mouse_genomes_project X 53082624 53083615 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097587.1 MGP_129S1SvImJ_G0036133.1 mouse_genomes_project X 137879052 137980997 + MGP_129S1SvImJ_P0097587 Frmpd3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0097588.1 MGP_129S1SvImJ_G0036133.1 mouse_genomes_project X 137913093 137939800 + MGP_129S1SvImJ_P0097588 Frmpd3 protein_coding protein_coding MGP_129S1SvImJ_T0097589.1 MGP_129S1SvImJ_G0036133.1 mouse_genomes_project X 137927875 137940445 + MGP_129S1SvImJ_P0097589 Frmpd3 protein_coding protein_coding MGP_129S1SvImJ_T0016374.1 MGP_129S1SvImJ_G0014463.1 mouse_genomes_project X 57416102 57417092 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102869.1 MGP_129S1SvImJ_G0040701.1 mouse_genomes_project X 99307282 99309504 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0016732.1 MGP_129S1SvImJ_G0014821.1 mouse_genomes_project X 130239508 130241131 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016438.1 MGP_129S1SvImJ_G0014527.1 mouse_genomes_project X 71853900 71854338 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016324.1 MGP_129S1SvImJ_G0014413.1 mouse_genomes_project X 44343941 44344341 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097894.1 MGP_129S1SvImJ_G0036213.1 mouse_genomes_project X 153220172 153236024 - MGP_129S1SvImJ_P0097894 Prdx4 protein_coding protein_coding MGP_129S1SvImJ_T0097895.1 MGP_129S1SvImJ_G0036213.1 mouse_genomes_project X 153226002 153238311 - MGP_129S1SvImJ_P0097895 Prdx4 protein_coding protein_coding MGP_129S1SvImJ_T0097896.1 MGP_129S1SvImJ_G0036213.1 mouse_genomes_project X 153234348 153236031 - Prdx4 protein_coding processed_transcript MGP_129S1SvImJ_T0016619.1 MGP_129S1SvImJ_G0014708.1 mouse_genomes_project X 102965878 102966491 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016200.1 MGP_129S1SvImJ_G0014289.1 mouse_genomes_project X 3580734 3581328 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097966.1 MGP_129S1SvImJ_G0036228.1 mouse_genomes_project X 157901322 158039215 + MGP_129S1SvImJ_P0097966 protein_coding protein_coding MGP_129S1SvImJ_T0097860.1 MGP_129S1SvImJ_G0036195.1 mouse_genomes_project X 151318043 151321372 + MGP_129S1SvImJ_P0097860 Ubqln2 protein_coding protein_coding MGP_129S1SvImJ_T0018645.1 MGP_129S1SvImJ_G0015775.1 mouse_genomes_project X 15864895 15895603 + A230072C01Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018646.1 MGP_129S1SvImJ_G0015775.1 mouse_genomes_project X 15865325 15895617 + A230072C01Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0011229.1 MGP_129S1SvImJ_G0009345.1 mouse_genomes_project X 131946085 131946186 + Mir7093 miRNA miRNA MGP_129S1SvImJ_T0011221.1 MGP_129S1SvImJ_G0009337.1 mouse_genomes_project X 100819472 100819572 - Mir672 miRNA miRNA MGP_129S1SvImJ_T0009436.1 MGP_129S1SvImJ_G0007570.1 mouse_genomes_project X 148905500 148907563 + Gm15138 lincRNA lincRNA MGP_129S1SvImJ_T0097278.1 MGP_129S1SvImJ_G0036034.1 mouse_genomes_project X 109359782 109384968 + Zfp711 protein_coding retained_intron MGP_129S1SvImJ_T0097279.1 MGP_129S1SvImJ_G0036034.1 mouse_genomes_project X 109359782 109392868 + MGP_129S1SvImJ_P0097279 Zfp711 protein_coding protein_coding MGP_129S1SvImJ_T0097280.1 MGP_129S1SvImJ_G0036034.1 mouse_genomes_project X 109359989 109391362 + MGP_129S1SvImJ_P0097280 Zfp711 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0097281.1 MGP_129S1SvImJ_G0036034.1 mouse_genomes_project X 109374595 109389716 + MGP_129S1SvImJ_P0097281 Zfp711 protein_coding protein_coding MGP_129S1SvImJ_T0097558.1 MGP_129S1SvImJ_G0036126.1 mouse_genomes_project X 137219523 137221495 - protein_coding translated_processed_pseudogene MGP_129S1SvImJ_T0016790.1 MGP_129S1SvImJ_G0014879.1 mouse_genomes_project X 139477959 139480106 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016575.1 MGP_129S1SvImJ_G0014664.1 mouse_genomes_project X 98349065 98349945 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097427.1 MGP_129S1SvImJ_G0036081.1 mouse_genomes_project X 132388790 132403723 - MGP_129S1SvImJ_P0097427 protein_coding protein_coding MGP_129S1SvImJ_T0011235.1 MGP_129S1SvImJ_G0009351.1 mouse_genomes_project X 140492172 140492267 - miRNA miRNA MGP_129S1SvImJ_T0016368.1 MGP_129S1SvImJ_G0014457.1 mouse_genomes_project X 56802412 56802969 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096400.1 MGP_129S1SvImJ_G0035820.1 mouse_genomes_project X 69554252 69562187 - Idh3g protein_coding retained_intron MGP_129S1SvImJ_T0096401.1 MGP_129S1SvImJ_G0035820.1 mouse_genomes_project X 69554252 69562187 - MGP_129S1SvImJ_P0096401 Idh3g protein_coding protein_coding MGP_129S1SvImJ_T0096402.1 MGP_129S1SvImJ_G0035820.1 mouse_genomes_project X 69554332 69556187 - Idh3g protein_coding retained_intron MGP_129S1SvImJ_T0096403.1 MGP_129S1SvImJ_G0035820.1 mouse_genomes_project X 69554959 69555986 - Idh3g protein_coding retained_intron MGP_129S1SvImJ_T0096404.1 MGP_129S1SvImJ_G0035820.1 mouse_genomes_project X 69555325 69556102 - Idh3g protein_coding retained_intron MGP_129S1SvImJ_T0096405.1 MGP_129S1SvImJ_G0035820.1 mouse_genomes_project X 69555363 69561912 - Idh3g protein_coding processed_transcript MGP_129S1SvImJ_T0096406.1 MGP_129S1SvImJ_G0035820.1 mouse_genomes_project X 69555710 69556997 - Idh3g protein_coding retained_intron MGP_129S1SvImJ_T0096407.1 MGP_129S1SvImJ_G0035820.1 mouse_genomes_project X 69555877 69557509 - Idh3g protein_coding retained_intron MGP_129S1SvImJ_T0096408.1 MGP_129S1SvImJ_G0035820.1 mouse_genomes_project X 69556268 69557658 - Idh3g protein_coding processed_transcript MGP_129S1SvImJ_T0098029.1 MGP_129S1SvImJ_G0036242.1 mouse_genomes_project X 160885621 160918479 - MGP_129S1SvImJ_P0098029 Syap1 protein_coding protein_coding MGP_129S1SvImJ_T0098030.1 MGP_129S1SvImJ_G0036242.1 mouse_genomes_project X 160886473 160891990 - Syap1 protein_coding retained_intron MGP_129S1SvImJ_T0096794.1 MGP_129S1SvImJ_G0035890.1 mouse_genomes_project X 81957012 81977873 + MGP_129S1SvImJ_P0096794 5430427O19Rik protein_coding protein_coding MGP_129S1SvImJ_T0095420.1 MGP_129S1SvImJ_G0035501.1 mouse_genomes_project X 61803 64171 - MGP_129S1SvImJ_P0095420 Mycs protein_coding protein_coding MGP_129S1SvImJ_T0016910.1 MGP_129S1SvImJ_G0014999.1 mouse_genomes_project X 162561569 162564266 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096116.1 MGP_129S1SvImJ_G0035718.1 mouse_genomes_project X 48144840 48185331 + MGP_129S1SvImJ_P0096116 Phf6 protein_coding protein_coding MGP_129S1SvImJ_T0096117.1 MGP_129S1SvImJ_G0035718.1 mouse_genomes_project X 48144846 48194371 + MGP_129S1SvImJ_P0096117 Phf6 protein_coding protein_coding MGP_129S1SvImJ_T0096118.1 MGP_129S1SvImJ_G0035718.1 mouse_genomes_project X 48160546 48177437 + Phf6 protein_coding processed_transcript MGP_129S1SvImJ_T0096119.1 MGP_129S1SvImJ_G0035718.1 mouse_genomes_project X 48160548 48177456 + Phf6 protein_coding processed_transcript MGP_129S1SvImJ_T0097466.1 MGP_129S1SvImJ_G0036097.1 mouse_genomes_project X 133616418 133618491 + MGP_129S1SvImJ_P0097466 Wbp5 protein_coding protein_coding MGP_129S1SvImJ_T0097467.1 MGP_129S1SvImJ_G0036097.1 mouse_genomes_project X 133617022 133618491 + MGP_129S1SvImJ_P0097467 Wbp5 protein_coding protein_coding MGP_129S1SvImJ_T0101556.1 MGP_129S1SvImJ_G0039623.1 mouse_genomes_project X 155316748 155316884 + Gm24281 snoRNA snoRNA MGP_129S1SvImJ_T0095450.1 MGP_129S1SvImJ_G0035513.1 mouse_genomes_project X 2205055 2216770 - MGP_129S1SvImJ_P0095450 Ccdc22 protein_coding protein_coding MGP_129S1SvImJ_T0095451.1 MGP_129S1SvImJ_G0035513.1 mouse_genomes_project X 2205056 2208526 - Ccdc22 protein_coding retained_intron MGP_129S1SvImJ_T0097339.1 MGP_129S1SvImJ_G0036058.1 mouse_genomes_project X 131051566 131074329 + MGP_129S1SvImJ_P0097339 Srpx2 protein_coding protein_coding MGP_129S1SvImJ_T0101513.1 MGP_129S1SvImJ_G0039580.1 mouse_genomes_project X 63197627 63197736 - Gm26276 snoRNA snoRNA MGP_129S1SvImJ_T0011202.1 MGP_129S1SvImJ_G0009318.1 mouse_genomes_project X 68281771 68281851 - Mir105 miRNA miRNA MGP_129S1SvImJ_T0016428.1 MGP_129S1SvImJ_G0014517.1 mouse_genomes_project X 70321562 70322033 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016362.1 MGP_129S1SvImJ_G0014451.1 mouse_genomes_project X 56083169 56083963 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016257.1 MGP_129S1SvImJ_G0014346.1 mouse_genomes_project X 15813955 15814154 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016544.1 MGP_129S1SvImJ_G0014633.1 mouse_genomes_project X 91667150 91669221 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016857.1 MGP_129S1SvImJ_G0014946.1 mouse_genomes_project X 153068138 153068840 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100245.1 MGP_129S1SvImJ_G0038312.1 mouse_genomes_project X 52053126 52053232 + Gm23258 snRNA snRNA MGP_129S1SvImJ_T0016592.1 MGP_129S1SvImJ_G0014681.1 mouse_genomes_project X 99949984 99950439 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0096234.1 MGP_129S1SvImJ_G0035764.1 mouse_genomes_project X 59649758 59650543 - MGP_129S1SvImJ_P0096234 Gm6760 protein_coding protein_coding MGP_129S1SvImJ_T0100235.1 MGP_129S1SvImJ_G0038302.1 mouse_genomes_project X 31276107 31276211 + Gm25047 snRNA snRNA MGP_129S1SvImJ_T0096159.1 MGP_129S1SvImJ_G0035740.1 mouse_genomes_project X 52034671 52097440 + MGP_129S1SvImJ_P0096159 Fhl1 protein_coding protein_coding MGP_129S1SvImJ_T0096160.1 MGP_129S1SvImJ_G0035740.1 mouse_genomes_project X 52034749 52097432 + MGP_129S1SvImJ_P0096160 Fhl1 protein_coding protein_coding MGP_129S1SvImJ_T0096161.1 MGP_129S1SvImJ_G0035740.1 mouse_genomes_project X 52034995 52096329 + MGP_129S1SvImJ_P0096161 Fhl1 protein_coding protein_coding MGP_129S1SvImJ_T0096162.1 MGP_129S1SvImJ_G0035740.1 mouse_genomes_project X 52083529 52097434 + MGP_129S1SvImJ_P0096162 Fhl1 protein_coding protein_coding MGP_129S1SvImJ_T0096163.1 MGP_129S1SvImJ_G0035740.1 mouse_genomes_project X 52083815 52097434 + MGP_129S1SvImJ_P0096163 Fhl1 protein_coding protein_coding MGP_129S1SvImJ_T0096164.1 MGP_129S1SvImJ_G0035740.1 mouse_genomes_project X 52083822 52096682 + MGP_129S1SvImJ_P0096164 Fhl1 protein_coding protein_coding MGP_129S1SvImJ_T0096165.1 MGP_129S1SvImJ_G0035740.1 mouse_genomes_project X 52083911 52093299 + MGP_129S1SvImJ_P0096165 Fhl1 protein_coding protein_coding MGP_129S1SvImJ_T0096166.1 MGP_129S1SvImJ_G0035740.1 mouse_genomes_project X 52090619 52094760 + MGP_129S1SvImJ_P0096166 Fhl1 protein_coding protein_coding MGP_129S1SvImJ_T0096167.1 MGP_129S1SvImJ_G0035740.1 mouse_genomes_project X 52091818 52093349 + MGP_129S1SvImJ_P0096167 Fhl1 protein_coding protein_coding MGP_129S1SvImJ_T0096168.1 MGP_129S1SvImJ_G0035740.1 mouse_genomes_project X 52092091 52093837 + Fhl1 protein_coding processed_transcript MGP_129S1SvImJ_T0016238.1 MGP_129S1SvImJ_G0014327.1 mouse_genomes_project X 11260130 11260382 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016414.1 MGP_129S1SvImJ_G0014503.1 mouse_genomes_project X 66251413 66251789 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011172.1 MGP_129S1SvImJ_G0009288.1 mouse_genomes_project X 48299219 48299314 - Mir322 miRNA miRNA MGP_129S1SvImJ_T0016191.1 MGP_129S1SvImJ_G0014280.1 mouse_genomes_project X 2368748 2369033 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097879.1 MGP_129S1SvImJ_G0036207.1 mouse_genomes_project X 152902467 152903104 - MGP_129S1SvImJ_P0097879 protein_coding protein_coding MGP_129S1SvImJ_T0016578.1 MGP_129S1SvImJ_G0014667.1 mouse_genomes_project X 98761166 98761630 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016263.1 MGP_129S1SvImJ_G0014352.1 mouse_genomes_project X 17205784 17206259 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095908.1 MGP_129S1SvImJ_G0035654.1 mouse_genomes_project X 32831968 32834994 - MGP_129S1SvImJ_P0095908 protein_coding protein_coding MGP_129S1SvImJ_T0016403.1 MGP_129S1SvImJ_G0014492.1 mouse_genomes_project X 64095313 64096319 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016195.1 MGP_129S1SvImJ_G0014284.1 mouse_genomes_project X 2681564 2681993 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101528.1 MGP_129S1SvImJ_G0039595.1 mouse_genomes_project X 89610302 89610435 + Gm23454 snoRNA snoRNA MGP_129S1SvImJ_T0009404.1 MGP_129S1SvImJ_G0007552.1 mouse_genomes_project X 95838869 95848051 - Gm14809 lincRNA lincRNA MGP_129S1SvImJ_T0016569.1 MGP_129S1SvImJ_G0014658.1 mouse_genomes_project X 97733290 97733559 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101814.1 MGP_129S1SvImJ_G0039776.1 mouse_genomes_project X 134214906 134215228 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0018707.1 MGP_129S1SvImJ_G0015793.1 mouse_genomes_project X 133473067 133484843 + 5730412P04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0016854.1 MGP_129S1SvImJ_G0014943.1 mouse_genomes_project X 152637468 152638454 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100288.1 MGP_129S1SvImJ_G0038355.1 mouse_genomes_project X 143873741 143873801 - Gm26151 snRNA snRNA MGP_129S1SvImJ_T0016494.1 MGP_129S1SvImJ_G0014583.1 mouse_genomes_project X 84952217 84954662 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097295.1 MGP_129S1SvImJ_G0036038.1 mouse_genomes_project X 111226941 111320886 + MGP_129S1SvImJ_P0097295 Klhl4 protein_coding protein_coding MGP_129S1SvImJ_T0097296.1 MGP_129S1SvImJ_G0036038.1 mouse_genomes_project X 111226941 111320886 + MGP_129S1SvImJ_P0097296 Klhl4 protein_coding protein_coding MGP_129S1SvImJ_T0097297.1 MGP_129S1SvImJ_G0036038.1 mouse_genomes_project X 111227212 111320565 + MGP_129S1SvImJ_P0097297 Klhl4 protein_coding protein_coding MGP_129S1SvImJ_T0096089.1 MGP_129S1SvImJ_G0035707.1 mouse_genomes_project X 45570671 45571670 - MGP_129S1SvImJ_P0096089 Olfr1324 protein_coding protein_coding MGP_129S1SvImJ_T0016462.1 MGP_129S1SvImJ_G0014551.1 mouse_genomes_project X 76100321 76100480 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016803.1 MGP_129S1SvImJ_G0014892.1 mouse_genomes_project X 141785617 141786440 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0097775.1 MGP_129S1SvImJ_G0036178.1 mouse_genomes_project X 149272282 149325385 + MGP_129S1SvImJ_P0097775 Phf8 protein_coding protein_coding MGP_129S1SvImJ_T0097776.1 MGP_129S1SvImJ_G0036178.1 mouse_genomes_project X 149272282 149375406 + MGP_129S1SvImJ_P0097776 Phf8 protein_coding protein_coding MGP_129S1SvImJ_T0097777.1 MGP_129S1SvImJ_G0036178.1 mouse_genomes_project X 149272282 149385591 + MGP_129S1SvImJ_P0097777 Phf8 protein_coding protein_coding MGP_129S1SvImJ_T0097778.1 MGP_129S1SvImJ_G0036178.1 mouse_genomes_project X 149272779 149348306 + MGP_129S1SvImJ_P0097778 Phf8 protein_coding protein_coding MGP_129S1SvImJ_T0097779.1 MGP_129S1SvImJ_G0036178.1 mouse_genomes_project X 149272791 149375406 + MGP_129S1SvImJ_P0097779 Phf8 protein_coding protein_coding MGP_129S1SvImJ_T0097780.1 MGP_129S1SvImJ_G0036178.1 mouse_genomes_project X 149272797 149337888 + MGP_129S1SvImJ_P0097780 Phf8 protein_coding protein_coding MGP_129S1SvImJ_T0097781.1 MGP_129S1SvImJ_G0036178.1 mouse_genomes_project X 149272797 149385593 + MGP_129S1SvImJ_P0097781 Phf8 protein_coding protein_coding MGP_129S1SvImJ_T0097782.1 MGP_129S1SvImJ_G0036178.1 mouse_genomes_project X 149273970 149305634 + MGP_129S1SvImJ_P0097782 Phf8 protein_coding protein_coding MGP_129S1SvImJ_T0097783.1 MGP_129S1SvImJ_G0036178.1 mouse_genomes_project X 149308902 149311126 + Phf8 protein_coding retained_intron MGP_129S1SvImJ_T0097784.1 MGP_129S1SvImJ_G0036178.1 mouse_genomes_project X 149320614 149330414 + MGP_129S1SvImJ_P0097784 Phf8 protein_coding protein_coding MGP_129S1SvImJ_T0097785.1 MGP_129S1SvImJ_G0036178.1 mouse_genomes_project X 149381550 149385593 + Phf8 protein_coding retained_intron MGP_129S1SvImJ_T0096005.1 MGP_129S1SvImJ_G0035683.1 mouse_genomes_project X 41447142 41448481 + MGP_129S1SvImJ_P0096005 Actrt1 protein_coding protein_coding MGP_129S1SvImJ_T0097504.1 MGP_129S1SvImJ_G0036109.1 mouse_genomes_project X 134363243 134366202 - MGP_129S1SvImJ_P0097504 protein_coding protein_coding MGP_129S1SvImJ_T0097360.1 MGP_129S1SvImJ_G0036064.1 mouse_genomes_project X 131383126 131445999 - MGP_129S1SvImJ_P0097360 Trmt2b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0097361.1 MGP_129S1SvImJ_G0036064.1 mouse_genomes_project X 131383882 131445999 - MGP_129S1SvImJ_P0097361 Trmt2b protein_coding protein_coding MGP_129S1SvImJ_T0097362.1 MGP_129S1SvImJ_G0036064.1 mouse_genomes_project X 131383883 131445944 - Trmt2b protein_coding retained_intron MGP_129S1SvImJ_T0097363.1 MGP_129S1SvImJ_G0036064.1 mouse_genomes_project X 131383887 131445937 - MGP_129S1SvImJ_P0097363 Trmt2b protein_coding protein_coding MGP_129S1SvImJ_T0097364.1 MGP_129S1SvImJ_G0036064.1 mouse_genomes_project X 131428121 131446001 - MGP_129S1SvImJ_P0097364 Trmt2b protein_coding protein_coding MGP_129S1SvImJ_T0097133.1 MGP_129S1SvImJ_G0035988.1 mouse_genomes_project X 100648101 100671785 - MGP_129S1SvImJ_P0097133 Rlim protein_coding protein_coding MGP_129S1SvImJ_T0097134.1 MGP_129S1SvImJ_G0035988.1 mouse_genomes_project X 100648101 100671785 - MGP_129S1SvImJ_P0097134 Rlim protein_coding protein_coding MGP_129S1SvImJ_T0097135.1 MGP_129S1SvImJ_G0035988.1 mouse_genomes_project X 100668295 100671785 - Rlim protein_coding retained_intron MGP_129S1SvImJ_T0016396.1 MGP_129S1SvImJ_G0014485.1 mouse_genomes_project X 62573614 62574134 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016353.1 MGP_129S1SvImJ_G0014442.1 mouse_genomes_project X 53961249 53962081 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095947.1 MGP_129S1SvImJ_G0035671.1 mouse_genomes_project X 34339435 34340132 + MGP_129S1SvImJ_P0095947 Cypt15 protein_coding protein_coding MGP_129S1SvImJ_T0016840.1 MGP_129S1SvImJ_G0014929.1 mouse_genomes_project X 149506315 149506492 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011796.1 MGP_129S1SvImJ_G0009912.1 mouse_genomes_project X 135249956 135250241 - Gm25393 misc_RNA misc_RNA MGP_129S1SvImJ_T0096965.1 MGP_129S1SvImJ_G0035944.1 mouse_genomes_project X 97049646 97054362 - MGP_129S1SvImJ_P0096965 P2ry4 protein_coding protein_coding MGP_129S1SvImJ_T0097875.1 MGP_129S1SvImJ_G0036203.1 mouse_genomes_project X 152349039 152351720 + MGP_129S1SvImJ_P0097875 Samt4 protein_coding protein_coding MGP_129S1SvImJ_T0016655.1 MGP_129S1SvImJ_G0014744.1 mouse_genomes_project X 109577246 109577721 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016493.1 MGP_129S1SvImJ_G0014582.1 mouse_genomes_project X 84910820 84911078 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016488.1 MGP_129S1SvImJ_G0014577.1 mouse_genomes_project X 84240656 84241192 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061530.1 MGP_129S1SvImJ_G0027378.1 mouse_genomes_project 3 88122489 88135207 - MGP_129S1SvImJ_P0061530 Bcan protein_coding protein_coding MGP_129S1SvImJ_T0061531.1 MGP_129S1SvImJ_G0027378.1 mouse_genomes_project 3 88127472 88129414 - Bcan protein_coding retained_intron MGP_129S1SvImJ_T0061532.1 MGP_129S1SvImJ_G0027378.1 mouse_genomes_project 3 88127472 88132823 - Bcan protein_coding retained_intron MGP_129S1SvImJ_T0061533.1 MGP_129S1SvImJ_G0027378.1 mouse_genomes_project 3 88128552 88131333 - Bcan protein_coding retained_intron MGP_129S1SvImJ_T0061534.1 MGP_129S1SvImJ_G0027378.1 mouse_genomes_project 3 88131412 88132233 - Bcan protein_coding retained_intron MGP_129S1SvImJ_T0061535.1 MGP_129S1SvImJ_G0027378.1 mouse_genomes_project 3 88132100 88134611 - MGP_129S1SvImJ_P0061535 Bcan protein_coding protein_coding MGP_129S1SvImJ_T0001337.1 MGP_129S1SvImJ_G0001261.1 mouse_genomes_project 3 128852581 128857394 + TEC TEC MGP_129S1SvImJ_T0014297.1 MGP_129S1SvImJ_G0012386.1 mouse_genomes_project 3 124034531 124034937 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007699.1 MGP_129S1SvImJ_G0006297.1 mouse_genomes_project 3 128624995 128627018 + Gm42827 lincRNA lincRNA MGP_129S1SvImJ_T0063532.1 MGP_129S1SvImJ_G0027839.1 mouse_genomes_project 3 124553489 124701083 + Bcar3 protein_coding retained_intron MGP_129S1SvImJ_T0063533.1 MGP_129S1SvImJ_G0027839.1 mouse_genomes_project 3 124693744 124700801 + Bcar3 protein_coding retained_intron MGP_129S1SvImJ_T0063534.1 MGP_129S1SvImJ_G0027839.1 mouse_genomes_project 3 124693765 124806610 + MGP_129S1SvImJ_P0063534 Bcar3 protein_coding protein_coding MGP_129S1SvImJ_T0063535.1 MGP_129S1SvImJ_G0027839.1 mouse_genomes_project 3 124693810 124747377 + Bcar3 protein_coding processed_transcript MGP_129S1SvImJ_T0063536.1 MGP_129S1SvImJ_G0027839.1 mouse_genomes_project 3 124759479 124784120 + MGP_129S1SvImJ_P0063536 Bcar3 protein_coding protein_coding MGP_129S1SvImJ_T0063537.1 MGP_129S1SvImJ_G0027839.1 mouse_genomes_project 3 124780350 124784121 + MGP_129S1SvImJ_P0063537 Bcar3 protein_coding protein_coding MGP_129S1SvImJ_T0063538.1 MGP_129S1SvImJ_G0027839.1 mouse_genomes_project 3 124783735 124788411 + Bcar3 protein_coding retained_intron MGP_129S1SvImJ_T0063539.1 MGP_129S1SvImJ_G0027839.1 mouse_genomes_project 3 124786792 124788599 + MGP_129S1SvImJ_P0063539 Bcar3 protein_coding protein_coding MGP_129S1SvImJ_T0063540.1 MGP_129S1SvImJ_G0027839.1 mouse_genomes_project 3 124787885 124799631 + MGP_129S1SvImJ_P0063540 Bcar3 protein_coding protein_coding MGP_129S1SvImJ_T0063541.1 MGP_129S1SvImJ_G0027839.1 mouse_genomes_project 3 124801066 124801825 + Bcar3 protein_coding retained_intron MGP_129S1SvImJ_T0060458.1 MGP_129S1SvImJ_G0027148.1 mouse_genomes_project 3 31664499 31716264 + MGP_129S1SvImJ_P0060458 Fxr1 protein_coding protein_coding MGP_129S1SvImJ_T0060459.1 MGP_129S1SvImJ_G0027148.1 mouse_genomes_project 3 31664553 31711251 + MGP_129S1SvImJ_P0060459 Fxr1 protein_coding protein_coding MGP_129S1SvImJ_T0060460.1 MGP_129S1SvImJ_G0027148.1 mouse_genomes_project 3 31664583 31716293 + MGP_129S1SvImJ_P0060460 Fxr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060461.1 MGP_129S1SvImJ_G0027148.1 mouse_genomes_project 3 31664590 31716267 + MGP_129S1SvImJ_P0060461 Fxr1 protein_coding protein_coding MGP_129S1SvImJ_T0060462.1 MGP_129S1SvImJ_G0027148.1 mouse_genomes_project 3 31664593 31716267 + MGP_129S1SvImJ_P0060462 Fxr1 protein_coding protein_coding MGP_129S1SvImJ_T0060463.1 MGP_129S1SvImJ_G0027148.1 mouse_genomes_project 3 31664593 31717243 + MGP_129S1SvImJ_P0060463 Fxr1 protein_coding protein_coding MGP_129S1SvImJ_T0060464.1 MGP_129S1SvImJ_G0027148.1 mouse_genomes_project 3 31686494 31688628 + Fxr1 protein_coding retained_intron MGP_129S1SvImJ_T0060465.1 MGP_129S1SvImJ_G0027148.1 mouse_genomes_project 3 31686497 31693496 + MGP_129S1SvImJ_P0060465 Fxr1 protein_coding protein_coding MGP_129S1SvImJ_T0060466.1 MGP_129S1SvImJ_G0027148.1 mouse_genomes_project 3 31693590 31696079 + Fxr1 protein_coding retained_intron MGP_129S1SvImJ_T0061658.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88782446 88790176 + Arhgef2 protein_coding processed_transcript MGP_129S1SvImJ_T0061659.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88782651 88792938 + Arhgef2 protein_coding processed_transcript MGP_129S1SvImJ_T0061660.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88782783 88826110 + MGP_129S1SvImJ_P0061660 Arhgef2 protein_coding protein_coding MGP_129S1SvImJ_T0061661.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88790019 88793100 + Arhgef2 protein_coding processed_transcript MGP_129S1SvImJ_T0061662.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88790207 88809304 + MGP_129S1SvImJ_P0061662 Arhgef2 protein_coding protein_coding MGP_129S1SvImJ_T0061663.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88790965 88810208 + MGP_129S1SvImJ_P0061663 Arhgef2 protein_coding protein_coding MGP_129S1SvImJ_T0061664.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88791741 88826713 + MGP_129S1SvImJ_P0061664 Arhgef2 protein_coding protein_coding MGP_129S1SvImJ_T0061665.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88791741 88827233 + MGP_129S1SvImJ_P0061665 Arhgef2 protein_coding protein_coding MGP_129S1SvImJ_T0061666.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88792115 88826076 + MGP_129S1SvImJ_P0061666 Arhgef2 protein_coding protein_coding MGP_129S1SvImJ_T0061667.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88796758 88826044 + MGP_129S1SvImJ_P0061667 Arhgef2 protein_coding protein_coding MGP_129S1SvImJ_T0061668.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88796771 88818717 + Arhgef2 protein_coding retained_intron MGP_129S1SvImJ_T0061669.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88796892 88826044 + MGP_129S1SvImJ_P0061669 Arhgef2 protein_coding protein_coding MGP_129S1SvImJ_T0061670.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88796925 88827231 + MGP_129S1SvImJ_P0061670 Arhgef2 protein_coding protein_coding MGP_129S1SvImJ_T0061671.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88797093 88810171 + Arhgef2 protein_coding retained_intron MGP_129S1SvImJ_T0061672.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88797181 88808769 + Arhgef2 protein_coding retained_intron MGP_129S1SvImJ_T0061673.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88798092 88808635 + MGP_129S1SvImJ_P0061673 Arhgef2 protein_coding protein_coding MGP_129S1SvImJ_T0061674.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88798554 88819889 + MGP_129S1SvImJ_P0061674 Arhgef2 protein_coding protein_coding MGP_129S1SvImJ_T0061675.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88799030 88809326 + MGP_129S1SvImJ_P0061675 Arhgef2 protein_coding protein_coding MGP_129S1SvImJ_T0061676.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88805118 88808685 + MGP_129S1SvImJ_P0061676 Arhgef2 protein_coding protein_coding MGP_129S1SvImJ_T0061677.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88805145 88807810 + Arhgef2 protein_coding retained_intron MGP_129S1SvImJ_T0061678.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88805149 88808701 + MGP_129S1SvImJ_P0061678 Arhgef2 protein_coding protein_coding MGP_129S1SvImJ_T0061679.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88805247 88808043 + MGP_129S1SvImJ_P0061679 Arhgef2 protein_coding protein_coding MGP_129S1SvImJ_T0061680.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88807619 88810371 + Arhgef2 protein_coding processed_transcript MGP_129S1SvImJ_T0061681.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88807904 88809299 + Arhgef2 protein_coding retained_intron MGP_129S1SvImJ_T0061682.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88808441 88809347 + Arhgef2 protein_coding retained_intron MGP_129S1SvImJ_T0061683.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88808626 88813525 + Arhgef2 protein_coding retained_intron MGP_129S1SvImJ_T0061684.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88810031 88810785 + Arhgef2 protein_coding retained_intron MGP_129S1SvImJ_T0061685.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88821606 88823093 + Arhgef2 protein_coding retained_intron MGP_129S1SvImJ_T0061686.1 MGP_129S1SvImJ_G0027404.1 mouse_genomes_project 3 88823112 88826146 + Arhgef2 protein_coding processed_transcript MGP_129S1SvImJ_T0060390.1 MGP_129S1SvImJ_G0027139.1 mouse_genomes_project 3 30145778 30194505 + MGP_129S1SvImJ_P0060390 Mfn1 protein_coding protein_coding MGP_129S1SvImJ_T0060391.1 MGP_129S1SvImJ_G0027139.1 mouse_genomes_project 3 30145844 30163354 + Mfn1 protein_coding retained_intron MGP_129S1SvImJ_T0060392.1 MGP_129S1SvImJ_G0027139.1 mouse_genomes_project 3 30145852 30163067 + MGP_129S1SvImJ_P0060392 Mfn1 protein_coding protein_coding MGP_129S1SvImJ_T0060393.1 MGP_129S1SvImJ_G0027139.1 mouse_genomes_project 3 30147856 30160505 + MGP_129S1SvImJ_P0060393 Mfn1 protein_coding protein_coding MGP_129S1SvImJ_T0060394.1 MGP_129S1SvImJ_G0027139.1 mouse_genomes_project 3 30147865 30192623 + MGP_129S1SvImJ_P0060394 Mfn1 protein_coding protein_coding MGP_129S1SvImJ_T0060395.1 MGP_129S1SvImJ_G0027139.1 mouse_genomes_project 3 30162902 30178478 + Mfn1 protein_coding retained_intron MGP_129S1SvImJ_T0060396.1 MGP_129S1SvImJ_G0027139.1 mouse_genomes_project 3 30169454 30178747 + Mfn1 protein_coding retained_intron MGP_129S1SvImJ_T0060397.1 MGP_129S1SvImJ_G0027139.1 mouse_genomes_project 3 30176890 30185718 + MGP_129S1SvImJ_P0060397 Mfn1 protein_coding protein_coding MGP_129S1SvImJ_T0060398.1 MGP_129S1SvImJ_G0027139.1 mouse_genomes_project 3 30178251 30179145 + Mfn1 protein_coding retained_intron MGP_129S1SvImJ_T0060399.1 MGP_129S1SvImJ_G0027139.1 mouse_genomes_project 3 30189564 30192427 + Mfn1 protein_coding retained_intron MGP_129S1SvImJ_T0001358.1 MGP_129S1SvImJ_G0001282.1 mouse_genomes_project 3 130381522 130382202 - TEC TEC MGP_129S1SvImJ_T0099745.1 MGP_129S1SvImJ_G0037812.1 mouse_genomes_project 3 65226850 65227003 - Gm26442 snRNA snRNA MGP_129S1SvImJ_T0001246.1 MGP_129S1SvImJ_G0001170.1 mouse_genomes_project 3 57552771 57553879 + TEC TEC MGP_129S1SvImJ_T0061136.1 MGP_129S1SvImJ_G0027286.1 mouse_genomes_project 3 67245212 67850809 + MGP_129S1SvImJ_P0061136 Schip1 protein_coding protein_coding MGP_129S1SvImJ_T0061137.1 MGP_129S1SvImJ_G0027286.1 mouse_genomes_project 3 67245212 67850809 + MGP_129S1SvImJ_P0061137 Schip1 protein_coding protein_coding MGP_129S1SvImJ_T0061138.1 MGP_129S1SvImJ_G0027286.1 mouse_genomes_project 3 67680704 67850826 + MGP_129S1SvImJ_P0061138 Schip1 protein_coding protein_coding MGP_129S1SvImJ_T0061139.1 MGP_129S1SvImJ_G0027286.1 mouse_genomes_project 3 67706786 67843015 + MGP_129S1SvImJ_P0061139 Schip1 protein_coding protein_coding MGP_129S1SvImJ_T0061140.1 MGP_129S1SvImJ_G0027286.1 mouse_genomes_project 3 67707503 67850808 + MGP_129S1SvImJ_P0061140 Schip1 protein_coding protein_coding MGP_129S1SvImJ_T0061141.1 MGP_129S1SvImJ_G0027286.1 mouse_genomes_project 3 67789533 67850809 + MGP_129S1SvImJ_P0061141 Schip1 protein_coding protein_coding MGP_129S1SvImJ_T0061142.1 MGP_129S1SvImJ_G0027286.1 mouse_genomes_project 3 67804581 67850809 + MGP_129S1SvImJ_P0061142 Schip1 protein_coding protein_coding MGP_129S1SvImJ_T0061143.1 MGP_129S1SvImJ_G0027286.1 mouse_genomes_project 3 67819035 67821024 + Schip1 protein_coding retained_intron MGP_129S1SvImJ_T0062356.1 MGP_129S1SvImJ_G0027574.1 mouse_genomes_project 3 95882263 95924263 - MGP_129S1SvImJ_P0062356 Gabpb2 protein_coding protein_coding MGP_129S1SvImJ_T0062357.1 MGP_129S1SvImJ_G0027574.1 mouse_genomes_project 3 95882263 95924056 - MGP_129S1SvImJ_P0062357 Gabpb2 protein_coding protein_coding MGP_129S1SvImJ_T0062358.1 MGP_129S1SvImJ_G0027574.1 mouse_genomes_project 3 95882270 95914202 - MGP_129S1SvImJ_P0062358 Gabpb2 protein_coding protein_coding MGP_129S1SvImJ_T0062359.1 MGP_129S1SvImJ_G0027574.1 mouse_genomes_project 3 95888084 95893611 - Gabpb2 protein_coding retained_intron MGP_129S1SvImJ_T0062360.1 MGP_129S1SvImJ_G0027574.1 mouse_genomes_project 3 95888220 95924056 - Gabpb2 protein_coding retained_intron MGP_129S1SvImJ_T0062361.1 MGP_129S1SvImJ_G0027574.1 mouse_genomes_project 3 95899955 95924263 - Gabpb2 protein_coding retained_intron MGP_129S1SvImJ_T0062362.1 MGP_129S1SvImJ_G0027574.1 mouse_genomes_project 3 95902052 95924263 - Gabpb2 protein_coding retained_intron MGP_129S1SvImJ_T0062363.1 MGP_129S1SvImJ_G0027574.1 mouse_genomes_project 3 95905488 95924101 - MGP_129S1SvImJ_P0062363 Gabpb2 protein_coding protein_coding MGP_129S1SvImJ_T0062364.1 MGP_129S1SvImJ_G0027574.1 mouse_genomes_project 3 95921582 95924041 - Gabpb2 protein_coding processed_transcript MGP_129S1SvImJ_T0099727.1 MGP_129S1SvImJ_G0037794.1 mouse_genomes_project 3 38991562 38991720 + Gm22043 snRNA snRNA MGP_129S1SvImJ_T0011560.1 MGP_129S1SvImJ_G0009676.1 mouse_genomes_project 3 71669709 71669800 + Gm27465 misc_RNA misc_RNA MGP_129S1SvImJ_T0062123.1 MGP_129S1SvImJ_G0027496.1 mouse_genomes_project 3 92878145 92879489 + MGP_129S1SvImJ_P0062123 Sprr2k protein_coding protein_coding MGP_129S1SvImJ_T0063232.1 MGP_129S1SvImJ_G0027779.1 mouse_genomes_project 3 110092512 110097298 + 1700013F07Rik protein_coding processed_transcript MGP_129S1SvImJ_T0063233.1 MGP_129S1SvImJ_G0027779.1 mouse_genomes_project 3 110097138 110102654 + 1700013F07Rik protein_coding processed_transcript MGP_129S1SvImJ_T0063234.1 MGP_129S1SvImJ_G0027779.1 mouse_genomes_project 3 110097145 110104296 + MGP_129S1SvImJ_P0063234 1700013F07Rik protein_coding protein_coding MGP_129S1SvImJ_T0001280.1 MGP_129S1SvImJ_G0001204.1 mouse_genomes_project 3 90636427 90638984 + TEC TEC MGP_129S1SvImJ_T0098904.1 MGP_129S1SvImJ_G0036982.1 mouse_genomes_project 3 105440144 105441801 - Gm42701 sense_intronic sense_intronic MGP_129S1SvImJ_T0013935.1 MGP_129S1SvImJ_G0012024.1 mouse_genomes_project 3 7755787 7756298 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063336.1 MGP_129S1SvImJ_G0027801.1 mouse_genomes_project 3 115813863 116014272 + MGP_129S1SvImJ_P0063336 Col11a1 protein_coding protein_coding MGP_129S1SvImJ_T0063337.1 MGP_129S1SvImJ_G0027801.1 mouse_genomes_project 3 115813863 115896813 + MGP_129S1SvImJ_P0063337 Col11a1 protein_coding protein_coding MGP_129S1SvImJ_T0063338.1 MGP_129S1SvImJ_G0027801.1 mouse_genomes_project 3 115813957 115816468 + Col11a1 protein_coding retained_intron MGP_129S1SvImJ_T0063339.1 MGP_129S1SvImJ_G0027801.1 mouse_genomes_project 3 115814222 115956061 + MGP_129S1SvImJ_P0063339 Col11a1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0063340.1 MGP_129S1SvImJ_G0027801.1 mouse_genomes_project 3 115814222 116012381 + MGP_129S1SvImJ_P0063340 Col11a1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0063341.1 MGP_129S1SvImJ_G0027801.1 mouse_genomes_project 3 115845568 115846536 + Col11a1 protein_coding retained_intron MGP_129S1SvImJ_T0063342.1 MGP_129S1SvImJ_G0027801.1 mouse_genomes_project 3 115937712 115944535 + Col11a1 protein_coding retained_intron MGP_129S1SvImJ_T0063343.1 MGP_129S1SvImJ_G0027801.1 mouse_genomes_project 3 115955833 116012871 + MGP_129S1SvImJ_P0063343 Col11a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0013989.1 MGP_129S1SvImJ_G0012078.1 mouse_genomes_project 3 27380883 27381322 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007483.1 MGP_129S1SvImJ_G0006133.1 mouse_genomes_project 3 17548118 17549877 + Gm43525 lincRNA lincRNA MGP_129S1SvImJ_T0062171.1 MGP_129S1SvImJ_G0027534.1 mouse_genomes_project 3 93930661 93939232 + MGP_129S1SvImJ_P0062171 Tchh protein_coding protein_coding MGP_129S1SvImJ_T0013951.1 MGP_129S1SvImJ_G0012040.1 mouse_genomes_project 3 11757610 11757899 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014268.1 MGP_129S1SvImJ_G0012357.1 mouse_genomes_project 3 113921766 113922066 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004285.1 MGP_129S1SvImJ_G0003770.1 mouse_genomes_project 3 86837942 86849350 - Gm37876 antisense antisense MGP_129S1SvImJ_T0001385.1 MGP_129S1SvImJ_G0001308.1 mouse_genomes_project 3 139740201 139741204 - TEC TEC MGP_129S1SvImJ_T0101032.1 MGP_129S1SvImJ_G0039099.1 mouse_genomes_project 3 69536222 69536350 - Gm23477 snoRNA snoRNA MGP_129S1SvImJ_T0014365.1 MGP_129S1SvImJ_G0012454.1 mouse_genomes_project 3 145347877 145348217 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060504.1 MGP_129S1SvImJ_G0027155.1 mouse_genomes_project 3 33832232 33859412 + MGP_129S1SvImJ_P0060504 Acad9 protein_coding protein_coding MGP_129S1SvImJ_T0060505.1 MGP_129S1SvImJ_G0027155.1 mouse_genomes_project 3 33832320 33842333 + MGP_129S1SvImJ_P0060505 Acad9 protein_coding protein_coding MGP_129S1SvImJ_T0060506.1 MGP_129S1SvImJ_G0027155.1 mouse_genomes_project 3 33832325 33857754 + Acad9 protein_coding retained_intron MGP_129S1SvImJ_T0060507.1 MGP_129S1SvImJ_G0027155.1 mouse_genomes_project 3 33843081 33847019 + Acad9 protein_coding retained_intron MGP_129S1SvImJ_T0060508.1 MGP_129S1SvImJ_G0027155.1 mouse_genomes_project 3 33844764 33855557 + MGP_129S1SvImJ_P0060508 Acad9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060509.1 MGP_129S1SvImJ_G0027155.1 mouse_genomes_project 3 33846458 33855209 + Acad9 protein_coding retained_intron MGP_129S1SvImJ_T0060510.1 MGP_129S1SvImJ_G0027155.1 mouse_genomes_project 3 33846533 33857754 + Acad9 protein_coding retained_intron MGP_129S1SvImJ_T0007746.1 MGP_129S1SvImJ_G0006339.1 mouse_genomes_project 3 146606710 146610048 + Gm43612 lincRNA lincRNA MGP_129S1SvImJ_T0014231.1 MGP_129S1SvImJ_G0012320.1 mouse_genomes_project 3 103291452 103291730 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004332.1 MGP_129S1SvImJ_G0003802.1 mouse_genomes_project 3 102600912 102601951 - Gm42538 antisense antisense MGP_129S1SvImJ_T0004333.1 MGP_129S1SvImJ_G0003802.1 mouse_genomes_project 3 102601571 102603234 - Gm42538 antisense antisense MGP_129S1SvImJ_T0099764.1 MGP_129S1SvImJ_G0037831.1 mouse_genomes_project 3 90486121 90486226 + Gm24185 snRNA snRNA MGP_129S1SvImJ_T0062816.1 MGP_129S1SvImJ_G0027685.1 mouse_genomes_project 3 104054530 104180192 - MGP_129S1SvImJ_P0062816 Sycp1 protein_coding protein_coding MGP_129S1SvImJ_T0062817.1 MGP_129S1SvImJ_G0027685.1 mouse_genomes_project 3 104054798 104056977 - Sycp1 protein_coding processed_transcript MGP_129S1SvImJ_T0062818.1 MGP_129S1SvImJ_G0027685.1 mouse_genomes_project 3 104054834 104180192 - MGP_129S1SvImJ_P0062818 Sycp1 protein_coding protein_coding MGP_129S1SvImJ_T0062819.1 MGP_129S1SvImJ_G0027685.1 mouse_genomes_project 3 104054918 104180101 - MGP_129S1SvImJ_P0062819 Sycp1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0062820.1 MGP_129S1SvImJ_G0027685.1 mouse_genomes_project 3 104054918 104180207 - MGP_129S1SvImJ_P0062820 Sycp1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0062821.1 MGP_129S1SvImJ_G0027685.1 mouse_genomes_project 3 104163667 104180182 - MGP_129S1SvImJ_P0062821 Sycp1 protein_coding protein_coding MGP_129S1SvImJ_T0098582.1 MGP_129S1SvImJ_G0036667.1 mouse_genomes_project 3 89073217 89073336 + n-R5s197 rRNA rRNA MGP_129S1SvImJ_T0014182.1 MGP_129S1SvImJ_G0012271.1 mouse_genomes_project 3 92435844 92436189 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004225.1 MGP_129S1SvImJ_G0003725.1 mouse_genomes_project 3 28182910 28189713 + Gm15462 antisense antisense MGP_129S1SvImJ_T0014209.1 MGP_129S1SvImJ_G0012298.1 mouse_genomes_project 3 97263104 97266000 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060493.1 MGP_129S1SvImJ_G0027153.1 mouse_genomes_project 3 33714581 33758361 - MGP_129S1SvImJ_P0060493 Mccc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060494.1 MGP_129S1SvImJ_G0027153.1 mouse_genomes_project 3 33715102 33758430 - MGP_129S1SvImJ_P0060494 Mccc1 protein_coding protein_coding MGP_129S1SvImJ_T0060495.1 MGP_129S1SvImJ_G0027153.1 mouse_genomes_project 3 33715108 33716379 - Mccc1 protein_coding retained_intron MGP_129S1SvImJ_T0060496.1 MGP_129S1SvImJ_G0027153.1 mouse_genomes_project 3 33716996 33724363 - Mccc1 protein_coding retained_intron MGP_129S1SvImJ_T0060497.1 MGP_129S1SvImJ_G0027153.1 mouse_genomes_project 3 33728635 33753664 - Mccc1 protein_coding retained_intron MGP_129S1SvImJ_T0060498.1 MGP_129S1SvImJ_G0027153.1 mouse_genomes_project 3 33730448 33731723 - Mccc1 protein_coding retained_intron MGP_129S1SvImJ_T0060499.1 MGP_129S1SvImJ_G0027153.1 mouse_genomes_project 3 33730931 33746339 - MGP_129S1SvImJ_P0060499 Mccc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060500.1 MGP_129S1SvImJ_G0027153.1 mouse_genomes_project 3 33741338 33758393 - MGP_129S1SvImJ_P0060500 Mccc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0098902.1 MGP_129S1SvImJ_G0036980.1 mouse_genomes_project 3 105416323 105417946 - Gm42699 sense_intronic sense_intronic MGP_129S1SvImJ_T0004409.1 MGP_129S1SvImJ_G0003849.1 mouse_genomes_project 3 141334573 141361526 - Gm16559 antisense antisense MGP_129S1SvImJ_T0099719.1 MGP_129S1SvImJ_G0037786.1 mouse_genomes_project 3 14000583 14000647 - Gm26485 snRNA snRNA MGP_129S1SvImJ_T0102507.1 MGP_129S1SvImJ_G0040341.1 mouse_genomes_project 3 114943335 114960955 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0013996.1 MGP_129S1SvImJ_G0012085.1 mouse_genomes_project 3 31359299 31362245 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014184.1 MGP_129S1SvImJ_G0012273.1 mouse_genomes_project 3 92762112 92762413 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062928.1 MGP_129S1SvImJ_G0027703.1 mouse_genomes_project 3 105213633 105271170 + MGP_129S1SvImJ_P0062928 Rsbn1 protein_coding protein_coding MGP_129S1SvImJ_T0062929.1 MGP_129S1SvImJ_G0027703.1 mouse_genomes_project 3 105213664 105271193 + MGP_129S1SvImJ_P0062929 Rsbn1 protein_coding protein_coding MGP_129S1SvImJ_T0062930.1 MGP_129S1SvImJ_G0027703.1 mouse_genomes_project 3 105214080 105268428 + MGP_129S1SvImJ_P0062930 Rsbn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062931.1 MGP_129S1SvImJ_G0027703.1 mouse_genomes_project 3 105231537 105264693 + MGP_129S1SvImJ_P0062931 Rsbn1 protein_coding protein_coding MGP_129S1SvImJ_T0060574.1 MGP_129S1SvImJ_G0027167.1 mouse_genomes_project 3 35066991 35077690 - MGP_129S1SvImJ_P0060574 Il21 protein_coding protein_coding MGP_129S1SvImJ_T0060575.1 MGP_129S1SvImJ_G0027167.1 mouse_genomes_project 3 35070485 35077637 - MGP_129S1SvImJ_P0060575 Il21 protein_coding protein_coding MGP_129S1SvImJ_T0060576.1 MGP_129S1SvImJ_G0027167.1 mouse_genomes_project 3 35075366 35077708 - Il21 protein_coding retained_intron MGP_129S1SvImJ_T0060279.1 MGP_129S1SvImJ_G0027116.1 mouse_genomes_project 3 26092754 26127290 + MGP_129S1SvImJ_P0060279 Slc2a2 protein_coding protein_coding MGP_129S1SvImJ_T0060280.1 MGP_129S1SvImJ_G0027116.1 mouse_genomes_project 3 26092868 26123407 + MGP_129S1SvImJ_P0060280 Slc2a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060281.1 MGP_129S1SvImJ_G0027116.1 mouse_genomes_project 3 26117447 26124258 + Slc2a2 protein_coding retained_intron MGP_129S1SvImJ_T0062920.1 MGP_129S1SvImJ_G0027702.1 mouse_genomes_project 3 105152818 105211768 + MGP_129S1SvImJ_P0062920 Ptpn22 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0062921.1 MGP_129S1SvImJ_G0027702.1 mouse_genomes_project 3 105153984 105211755 + MGP_129S1SvImJ_P0062921 Ptpn22 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062922.1 MGP_129S1SvImJ_G0027702.1 mouse_genomes_project 3 105154744 105172996 + Ptpn22 protein_coding processed_transcript MGP_129S1SvImJ_T0062923.1 MGP_129S1SvImJ_G0027702.1 mouse_genomes_project 3 105174299 105176183 + Ptpn22 protein_coding retained_intron MGP_129S1SvImJ_T0062924.1 MGP_129S1SvImJ_G0027702.1 mouse_genomes_project 3 105182511 105184685 + Ptpn22 protein_coding retained_intron MGP_129S1SvImJ_T0062925.1 MGP_129S1SvImJ_G0027702.1 mouse_genomes_project 3 105182601 105201251 + Ptpn22 protein_coding processed_transcript MGP_129S1SvImJ_T0062926.1 MGP_129S1SvImJ_G0027702.1 mouse_genomes_project 3 105185142 105208969 + Ptpn22 protein_coding retained_intron MGP_129S1SvImJ_T0062927.1 MGP_129S1SvImJ_G0027702.1 mouse_genomes_project 3 105199903 105211757 + Ptpn22 protein_coding retained_intron MGP_129S1SvImJ_T0004322.1 MGP_129S1SvImJ_G0003795.1 mouse_genomes_project 3 97431551 97435308 - Gm15441 antisense antisense MGP_129S1SvImJ_T0004323.1 MGP_129S1SvImJ_G0003795.1 mouse_genomes_project 3 97431574 97445808 - Gm15441 antisense antisense MGP_129S1SvImJ_T0064018.1 MGP_129S1SvImJ_G0027929.1 mouse_genomes_project 3 141367665 141383285 + MGP_129S1SvImJ_P0064018 Adh6a protein_coding protein_coding MGP_129S1SvImJ_T0064019.1 MGP_129S1SvImJ_G0027929.1 mouse_genomes_project 3 141367665 141383881 + MGP_129S1SvImJ_P0064019 Adh6a protein_coding protein_coding MGP_129S1SvImJ_T0014371.1 MGP_129S1SvImJ_G0012460.1 mouse_genomes_project 3 148041401 148041926 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099747.1 MGP_129S1SvImJ_G0037814.1 mouse_genomes_project 3 67764082 67764271 - Gm22073 snRNA snRNA MGP_129S1SvImJ_T0062149.1 MGP_129S1SvImJ_G0027519.1 mouse_genomes_project 3 93284920 93289136 - MGP_129S1SvImJ_P0062149 Kprp protein_coding protein_coding MGP_129S1SvImJ_T0001345.1 MGP_129S1SvImJ_G0001269.1 mouse_genomes_project 3 129402275 129403315 - TEC TEC MGP_129S1SvImJ_T0004216.1 MGP_129S1SvImJ_G0003719.1 mouse_genomes_project 3 4444756 4517515 + Gm16685 antisense antisense MGP_129S1SvImJ_T0099753.1 MGP_129S1SvImJ_G0037820.1 mouse_genomes_project 3 85989312 85989374 - Gm24501 snRNA snRNA MGP_129S1SvImJ_T0063199.1 MGP_129S1SvImJ_G0027773.1 mouse_genomes_project 3 109823913 109906512 + MGP_129S1SvImJ_P0063199 Sort1 protein_coding protein_coding MGP_129S1SvImJ_T0063200.1 MGP_129S1SvImJ_G0027773.1 mouse_genomes_project 3 109823922 109906580 + MGP_129S1SvImJ_P0063200 Sort1 protein_coding protein_coding MGP_129S1SvImJ_T0063201.1 MGP_129S1SvImJ_G0027773.1 mouse_genomes_project 3 109900535 109906507 + Sort1 protein_coding retained_intron MGP_129S1SvImJ_T0063190.1 MGP_129S1SvImJ_G0027770.1 mouse_genomes_project 3 109741341 109750054 - MGP_129S1SvImJ_P0063190 Atxn7l2 protein_coding protein_coding MGP_129S1SvImJ_T0063191.1 MGP_129S1SvImJ_G0027770.1 mouse_genomes_project 3 109741347 109747694 - Atxn7l2 protein_coding retained_intron MGP_129S1SvImJ_T0063192.1 MGP_129S1SvImJ_G0027770.1 mouse_genomes_project 3 109741478 109749561 - MGP_129S1SvImJ_P0063192 Atxn7l2 protein_coding protein_coding MGP_129S1SvImJ_T0063193.1 MGP_129S1SvImJ_G0027770.1 mouse_genomes_project 3 109746201 109748691 - MGP_129S1SvImJ_P0063193 Atxn7l2 protein_coding protein_coding MGP_129S1SvImJ_T0063194.1 MGP_129S1SvImJ_G0027770.1 mouse_genomes_project 3 109748095 109749588 - Atxn7l2 protein_coding processed_transcript MGP_129S1SvImJ_T0014033.1 MGP_129S1SvImJ_G0012122.1 mouse_genomes_project 3 42847328 42847710 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001348.1 MGP_129S1SvImJ_G0001272.1 mouse_genomes_project 3 129448232 129450720 - TEC TEC MGP_129S1SvImJ_T0001232.1 MGP_129S1SvImJ_G0001156.1 mouse_genomes_project 3 51694039 51694863 + TEC TEC MGP_129S1SvImJ_T0062240.1 MGP_129S1SvImJ_G0027556.1 mouse_genomes_project 3 95241092 95257362 + MGP_129S1SvImJ_P0062240 Gm10972 protein_coding protein_coding MGP_129S1SvImJ_T0101026.1 MGP_129S1SvImJ_G0039093.1 mouse_genomes_project 3 55224389 55224520 - Gm25727 snoRNA snoRNA MGP_129S1SvImJ_T0001272.1 MGP_129S1SvImJ_G0001196.1 mouse_genomes_project 3 83955617 83959734 - TEC TEC MGP_129S1SvImJ_T0004301.1 MGP_129S1SvImJ_G0003781.1 mouse_genomes_project 3 90764054 90771321 + Gm16048 antisense antisense MGP_129S1SvImJ_T0062235.1 MGP_129S1SvImJ_G0027555.1 mouse_genomes_project 3 95210989 95289953 - MGP_129S1SvImJ_P0062235 Tuft1 protein_coding protein_coding MGP_129S1SvImJ_T0062236.1 MGP_129S1SvImJ_G0027555.1 mouse_genomes_project 3 95210991 95289954 - MGP_129S1SvImJ_P0062236 Tuft1 protein_coding protein_coding MGP_129S1SvImJ_T0062237.1 MGP_129S1SvImJ_G0027555.1 mouse_genomes_project 3 95211228 95289882 - MGP_129S1SvImJ_P0062237 Tuft1 protein_coding protein_coding MGP_129S1SvImJ_T0062238.1 MGP_129S1SvImJ_G0027555.1 mouse_genomes_project 3 95212400 95213539 - Tuft1 protein_coding retained_intron MGP_129S1SvImJ_T0062239.1 MGP_129S1SvImJ_G0027555.1 mouse_genomes_project 3 95222009 95289882 - MGP_129S1SvImJ_P0062239 Tuft1 protein_coding protein_coding MGP_129S1SvImJ_T0014110.1 MGP_129S1SvImJ_G0012199.1 mouse_genomes_project 3 66093414 66093736 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004255.1 MGP_129S1SvImJ_G0003748.1 mouse_genomes_project 3 51692269 51695285 - Gm43803 antisense antisense MGP_129S1SvImJ_T0004256.1 MGP_129S1SvImJ_G0003748.1 mouse_genomes_project 3 51692286 51693589 - Gm43803 antisense antisense MGP_129S1SvImJ_T0060998.1 MGP_129S1SvImJ_G0027254.1 mouse_genomes_project 3 59392790 59526701 + MGP_129S1SvImJ_P0060998 Mbnl1 protein_coding protein_coding MGP_129S1SvImJ_T0060999.1 MGP_129S1SvImJ_G0027254.1 mouse_genomes_project 3 59393002 59534839 + MGP_129S1SvImJ_P0060999 Mbnl1 protein_coding protein_coding MGP_129S1SvImJ_T0061000.1 MGP_129S1SvImJ_G0027254.1 mouse_genomes_project 3 59393028 59395546 + Mbnl1 protein_coding retained_intron MGP_129S1SvImJ_T0061001.1 MGP_129S1SvImJ_G0027254.1 mouse_genomes_project 3 59393034 59554059 + MGP_129S1SvImJ_P0061001 Mbnl1 protein_coding protein_coding MGP_129S1SvImJ_T0061002.1 MGP_129S1SvImJ_G0027254.1 mouse_genomes_project 3 59393037 59526686 + MGP_129S1SvImJ_P0061002 Mbnl1 protein_coding protein_coding MGP_129S1SvImJ_T0061003.1 MGP_129S1SvImJ_G0027254.1 mouse_genomes_project 3 59416301 59478068 + Mbnl1 protein_coding processed_transcript MGP_129S1SvImJ_T0061004.1 MGP_129S1SvImJ_G0027254.1 mouse_genomes_project 3 59416586 59529038 + Mbnl1 protein_coding retained_intron MGP_129S1SvImJ_T0061005.1 MGP_129S1SvImJ_G0027254.1 mouse_genomes_project 3 59416603 59560162 + Mbnl1 protein_coding processed_transcript MGP_129S1SvImJ_T0061006.1 MGP_129S1SvImJ_G0027254.1 mouse_genomes_project 3 59416631 59478046 + Mbnl1 protein_coding processed_transcript MGP_129S1SvImJ_T0061007.1 MGP_129S1SvImJ_G0027254.1 mouse_genomes_project 3 59416631 59450524 + Mbnl1 protein_coding retained_intron MGP_129S1SvImJ_T0061008.1 MGP_129S1SvImJ_G0027254.1 mouse_genomes_project 3 59416644 59562351 + MGP_129S1SvImJ_P0061008 Mbnl1 protein_coding protein_coding MGP_129S1SvImJ_T0061009.1 MGP_129S1SvImJ_G0027254.1 mouse_genomes_project 3 59447013 59447997 + Mbnl1 protein_coding processed_transcript MGP_129S1SvImJ_T0061010.1 MGP_129S1SvImJ_G0027254.1 mouse_genomes_project 3 59447282 59562351 + MGP_129S1SvImJ_P0061010 Mbnl1 protein_coding protein_coding MGP_129S1SvImJ_T0061011.1 MGP_129S1SvImJ_G0027254.1 mouse_genomes_project 3 59447936 59562366 + MGP_129S1SvImJ_P0061011 Mbnl1 protein_coding protein_coding MGP_129S1SvImJ_T0061012.1 MGP_129S1SvImJ_G0027254.1 mouse_genomes_project 3 59447936 59561804 + MGP_129S1SvImJ_P0061012 Mbnl1 protein_coding protein_coding MGP_129S1SvImJ_T0061013.1 MGP_129S1SvImJ_G0027254.1 mouse_genomes_project 3 59448470 59550683 + Mbnl1 protein_coding retained_intron MGP_129S1SvImJ_T0061014.1 MGP_129S1SvImJ_G0027254.1 mouse_genomes_project 3 59448540 59557782 + Mbnl1 protein_coding processed_transcript MGP_129S1SvImJ_T0061015.1 MGP_129S1SvImJ_G0027254.1 mouse_genomes_project 3 59526577 59545037 + MGP_129S1SvImJ_P0061015 Mbnl1 protein_coding protein_coding MGP_129S1SvImJ_T0061016.1 MGP_129S1SvImJ_G0027254.1 mouse_genomes_project 3 59526647 59559427 + MGP_129S1SvImJ_P0061016 Mbnl1 protein_coding protein_coding MGP_129S1SvImJ_T0061017.1 MGP_129S1SvImJ_G0027254.1 mouse_genomes_project 3 59534482 59547408 + Mbnl1 protein_coding retained_intron MGP_129S1SvImJ_T0061018.1 MGP_129S1SvImJ_G0027254.1 mouse_genomes_project 3 59555878 59559143 + Mbnl1 protein_coding retained_intron MGP_129S1SvImJ_T0014386.1 MGP_129S1SvImJ_G0012475.1 mouse_genomes_project 3 156671454 156672162 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061309.1 MGP_129S1SvImJ_G0027324.1 mouse_genomes_project 3 81777659 81795881 + Asic5 protein_coding processed_transcript MGP_129S1SvImJ_T0061310.1 MGP_129S1SvImJ_G0027324.1 mouse_genomes_project 3 81791891 81816806 + MGP_129S1SvImJ_P0061310 Asic5 protein_coding protein_coding MGP_129S1SvImJ_T0101693.1 MGP_129S1SvImJ_G0039705.1 mouse_genomes_project 3 94995000 94995775 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101694.1 MGP_129S1SvImJ_G0039705.1 mouse_genomes_project 3 94995191 94995609 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0062976.1 MGP_129S1SvImJ_G0027713.1 mouse_genomes_project 3 106191414 106193869 + St7l protein_coding retained_intron MGP_129S1SvImJ_T0062977.1 MGP_129S1SvImJ_G0027713.1 mouse_genomes_project 3 106191912 106269750 + MGP_129S1SvImJ_P0062977 St7l protein_coding protein_coding MGP_129S1SvImJ_T0062978.1 MGP_129S1SvImJ_G0027713.1 mouse_genomes_project 3 106191912 106264744 + MGP_129S1SvImJ_P0062978 St7l protein_coding protein_coding MGP_129S1SvImJ_T0062979.1 MGP_129S1SvImJ_G0027713.1 mouse_genomes_project 3 106192476 106267469 + MGP_129S1SvImJ_P0062979 St7l protein_coding protein_coding MGP_129S1SvImJ_T0062980.1 MGP_129S1SvImJ_G0027713.1 mouse_genomes_project 3 106192480 106267593 + MGP_129S1SvImJ_P0062980 St7l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062981.1 MGP_129S1SvImJ_G0027713.1 mouse_genomes_project 3 106192489 106224166 + MGP_129S1SvImJ_P0062981 St7l protein_coding protein_coding MGP_129S1SvImJ_T0062982.1 MGP_129S1SvImJ_G0027713.1 mouse_genomes_project 3 106192522 106224098 + St7l protein_coding processed_transcript MGP_129S1SvImJ_T0062983.1 MGP_129S1SvImJ_G0027713.1 mouse_genomes_project 3 106199720 106257439 + MGP_129S1SvImJ_P0062983 St7l protein_coding protein_coding MGP_129S1SvImJ_T0062984.1 MGP_129S1SvImJ_G0027713.1 mouse_genomes_project 3 106199743 106217842 + St7l protein_coding processed_transcript MGP_129S1SvImJ_T0062985.1 MGP_129S1SvImJ_G0027713.1 mouse_genomes_project 3 106217745 106257427 + MGP_129S1SvImJ_P0062985 St7l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062986.1 MGP_129S1SvImJ_G0027713.1 mouse_genomes_project 3 106223683 106229778 + St7l protein_coding retained_intron MGP_129S1SvImJ_T0014148.1 MGP_129S1SvImJ_G0012237.1 mouse_genomes_project 3 78394488 78395333 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014036.1 MGP_129S1SvImJ_G0012125.1 mouse_genomes_project 3 44635207 44635926 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062987.1 MGP_129S1SvImJ_G0027714.1 mouse_genomes_project 3 106284938 106301868 - MGP_129S1SvImJ_P0062987 Wnt2b protein_coding protein_coding MGP_129S1SvImJ_T0062988.1 MGP_129S1SvImJ_G0027714.1 mouse_genomes_project 3 106300359 106301668 - Wnt2b protein_coding retained_intron MGP_129S1SvImJ_T0007622.1 MGP_129S1SvImJ_G0006235.1 mouse_genomes_project 3 90002216 90007946 - 4632404H12Rik lincRNA lincRNA MGP_129S1SvImJ_T0007623.1 MGP_129S1SvImJ_G0006235.1 mouse_genomes_project 3 90002826 90007497 - 4632404H12Rik lincRNA lincRNA MGP_129S1SvImJ_T0063780.1 MGP_129S1SvImJ_G0027881.1 mouse_genomes_project 3 133355317 133373955 + MGP_129S1SvImJ_P0063780 Etnppl protein_coding protein_coding MGP_129S1SvImJ_T0063781.1 MGP_129S1SvImJ_G0027881.1 mouse_genomes_project 3 133355438 133376664 + MGP_129S1SvImJ_P0063781 Etnppl protein_coding protein_coding MGP_129S1SvImJ_T0063782.1 MGP_129S1SvImJ_G0027881.1 mouse_genomes_project 3 133355441 133360719 + Etnppl protein_coding retained_intron MGP_129S1SvImJ_T0063783.1 MGP_129S1SvImJ_G0027881.1 mouse_genomes_project 3 133355468 133360740 + Etnppl protein_coding retained_intron MGP_129S1SvImJ_T0063784.1 MGP_129S1SvImJ_G0027881.1 mouse_genomes_project 3 133355563 133373823 + MGP_129S1SvImJ_P0063784 Etnppl protein_coding protein_coding MGP_129S1SvImJ_T0063785.1 MGP_129S1SvImJ_G0027881.1 mouse_genomes_project 3 133365605 133368810 + MGP_129S1SvImJ_P0063785 Etnppl protein_coding protein_coding MGP_129S1SvImJ_T0060132.1 MGP_129S1SvImJ_G0027088.1 mouse_genomes_project 3 15244625 15417965 - MGP_129S1SvImJ_P0060132 Cyp7b1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0004415.1 MGP_129S1SvImJ_G0003855.1 mouse_genomes_project 3 148833999 148836021 - 9530034A14Rik antisense antisense MGP_129S1SvImJ_T0014134.1 MGP_129S1SvImJ_G0012223.1 mouse_genomes_project 3 73352287 73353364 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011552.1 MGP_129S1SvImJ_G0009668.1 mouse_genomes_project 3 16530226 16530538 + Gm22282 misc_RNA misc_RNA MGP_129S1SvImJ_T0013954.1 MGP_129S1SvImJ_G0012043.1 mouse_genomes_project 3 13104127 13105217 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062634.1 MGP_129S1SvImJ_G0027635.1 mouse_genomes_project 3 97772197 97810116 - MGP_129S1SvImJ_P0062634 Gpr89 protein_coding protein_coding MGP_129S1SvImJ_T0062635.1 MGP_129S1SvImJ_G0027635.1 mouse_genomes_project 3 97772507 97797696 - Gpr89 protein_coding processed_transcript MGP_129S1SvImJ_T0062636.1 MGP_129S1SvImJ_G0027635.1 mouse_genomes_project 3 97775402 97780060 - Gpr89 protein_coding retained_intron MGP_129S1SvImJ_T0062637.1 MGP_129S1SvImJ_G0027635.1 mouse_genomes_project 3 97784443 97803320 - Gpr89 protein_coding processed_transcript MGP_129S1SvImJ_T0062638.1 MGP_129S1SvImJ_G0027635.1 mouse_genomes_project 3 97786346 97802209 - Gpr89 protein_coding processed_transcript MGP_129S1SvImJ_T0062639.1 MGP_129S1SvImJ_G0027635.1 mouse_genomes_project 3 97786346 97810082 - MGP_129S1SvImJ_P0062639 Gpr89 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0102503.1 MGP_129S1SvImJ_G0040337.1 mouse_genomes_project 3 109424207 109432481 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0001388.1 MGP_129S1SvImJ_G0001311.1 mouse_genomes_project 3 144843024 144845636 + TEC TEC MGP_129S1SvImJ_T0014210.1 MGP_129S1SvImJ_G0012299.1 mouse_genomes_project 3 97269813 97270265 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014333.1 MGP_129S1SvImJ_G0012422.1 mouse_genomes_project 3 137086154 137086620 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063111.1 MGP_129S1SvImJ_G0027750.1 mouse_genomes_project 3 109049324 109050711 - MGP_129S1SvImJ_P0063111 Ubl4b protein_coding protein_coding MGP_129S1SvImJ_T0060632.1 MGP_129S1SvImJ_G0027180.1 mouse_genomes_project 3 38766477 38788270 + MGP_129S1SvImJ_P0060632 Plk4 protein_coding protein_coding MGP_129S1SvImJ_T0060633.1 MGP_129S1SvImJ_G0027180.1 mouse_genomes_project 3 38766486 38778466 + Plk4 protein_coding retained_intron MGP_129S1SvImJ_T0060634.1 MGP_129S1SvImJ_G0027180.1 mouse_genomes_project 3 38766500 38768082 + Plk4 protein_coding retained_intron MGP_129S1SvImJ_T0060635.1 MGP_129S1SvImJ_G0027180.1 mouse_genomes_project 3 38766500 38788138 + MGP_129S1SvImJ_P0060635 Plk4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060636.1 MGP_129S1SvImJ_G0027180.1 mouse_genomes_project 3 38766508 38775057 + Plk4 protein_coding retained_intron MGP_129S1SvImJ_T0060637.1 MGP_129S1SvImJ_G0027180.1 mouse_genomes_project 3 38766512 38788270 + MGP_129S1SvImJ_P0060637 Plk4 protein_coding protein_coding MGP_129S1SvImJ_T0060638.1 MGP_129S1SvImJ_G0027180.1 mouse_genomes_project 3 38766712 38787804 + MGP_129S1SvImJ_P0060638 Plk4 protein_coding protein_coding MGP_129S1SvImJ_T0060639.1 MGP_129S1SvImJ_G0027180.1 mouse_genomes_project 3 38767239 38774005 + MGP_129S1SvImJ_P0060639 Plk4 protein_coding protein_coding MGP_129S1SvImJ_T0060640.1 MGP_129S1SvImJ_G0027180.1 mouse_genomes_project 3 38767921 38768503 + Plk4 protein_coding retained_intron MGP_129S1SvImJ_T0060641.1 MGP_129S1SvImJ_G0027180.1 mouse_genomes_project 3 38784124 38788269 + MGP_129S1SvImJ_P0060641 Plk4 protein_coding protein_coding MGP_129S1SvImJ_T0101078.1 MGP_129S1SvImJ_G0039145.1 mouse_genomes_project 3 157826030 157826155 + Gm24395 snoRNA snoRNA MGP_129S1SvImJ_T0098891.1 MGP_129S1SvImJ_G0036969.1 mouse_genomes_project 3 103718196 103721106 + Gm42679 sense_intronic sense_intronic MGP_129S1SvImJ_T0061175.1 MGP_129S1SvImJ_G0027292.1 mouse_genomes_project 3 68260028 68271162 - MGP_129S1SvImJ_P0061175 Trim59 protein_coding protein_coding MGP_129S1SvImJ_T0061176.1 MGP_129S1SvImJ_G0027292.1 mouse_genomes_project 3 68261426 68271122 - MGP_129S1SvImJ_P0061176 Trim59 protein_coding protein_coding MGP_129S1SvImJ_T0061177.1 MGP_129S1SvImJ_G0027292.1 mouse_genomes_project 3 68269923 68271122 - Trim59 protein_coding retained_intron MGP_129S1SvImJ_T0061178.1 MGP_129S1SvImJ_G0027292.1 mouse_genomes_project 3 68270150 68271130 - Trim59 protein_coding processed_transcript MGP_129S1SvImJ_T0007456.1 MGP_129S1SvImJ_G0006118.1 mouse_genomes_project 3 5925253 5938879 + 4930539M17Rik lincRNA lincRNA MGP_129S1SvImJ_T0001283.1 MGP_129S1SvImJ_G0001207.1 mouse_genomes_project 3 96082951 96084393 + TEC TEC MGP_129S1SvImJ_T0007536.1 MGP_129S1SvImJ_G0006175.1 mouse_genomes_project 3 39489351 39493810 - Platr4 lincRNA lincRNA MGP_129S1SvImJ_T0007537.1 MGP_129S1SvImJ_G0006175.1 mouse_genomes_project 3 39493012 39498526 - Platr4 lincRNA lincRNA MGP_129S1SvImJ_T0007538.1 MGP_129S1SvImJ_G0006175.1 mouse_genomes_project 3 39494137 39498528 - Platr4 lincRNA lincRNA MGP_129S1SvImJ_T0007584.1 MGP_129S1SvImJ_G0006211.1 mouse_genomes_project 3 75124034 75133610 - Platr10 lincRNA lincRNA MGP_129S1SvImJ_T0007585.1 MGP_129S1SvImJ_G0006211.1 mouse_genomes_project 3 75124428 75125236 - Platr10 lincRNA lincRNA MGP_129S1SvImJ_T0014072.1 MGP_129S1SvImJ_G0012161.1 mouse_genomes_project 3 56605676 56606172 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014267.1 MGP_129S1SvImJ_G0012356.1 mouse_genomes_project 3 113499344 113499738 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062560.1 MGP_129S1SvImJ_G0027614.1 mouse_genomes_project 3 97081429 97081917 + MGP_129S1SvImJ_P0062560 Hist2h3b protein_coding protein_coding MGP_129S1SvImJ_T0004412.1 MGP_129S1SvImJ_G0003852.1 mouse_genomes_project 3 145956111 145957131 - Gm15540 antisense antisense MGP_129S1SvImJ_T0014310.1 MGP_129S1SvImJ_G0012399.1 mouse_genomes_project 3 126934638 126935284 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014322.1 MGP_129S1SvImJ_G0012411.1 mouse_genomes_project 3 133516199 133516497 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007596.1 MGP_129S1SvImJ_G0006220.1 mouse_genomes_project 3 81583126 81587845 + A830029E22Rik lincRNA lincRNA MGP_129S1SvImJ_T0004300.1 MGP_129S1SvImJ_G0003780.1 mouse_genomes_project 3 90588756 90590862 - 4930537H20Rik antisense antisense MGP_129S1SvImJ_T0099776.1 MGP_129S1SvImJ_G0037843.1 mouse_genomes_project 3 104731815 104731922 - Gm25199 snRNA snRNA MGP_129S1SvImJ_T0102472.1 MGP_129S1SvImJ_G0040306.1 mouse_genomes_project 3 90220750 90223928 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0014168.1 MGP_129S1SvImJ_G0012257.1 mouse_genomes_project 3 87099266 87100213 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001327.1 MGP_129S1SvImJ_G0001251.1 mouse_genomes_project 3 124251767 124254974 + TEC TEC MGP_129S1SvImJ_T0014206.1 MGP_129S1SvImJ_G0012295.1 mouse_genomes_project 3 96677214 96679801 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001138.1 MGP_129S1SvImJ_G0001064.1 mouse_genomes_project 3 16334429 16335141 - TEC TEC MGP_129S1SvImJ_T0063044.1 MGP_129S1SvImJ_G0027731.1 mouse_genomes_project 3 107733125 107734437 + protein_coding retained_intron MGP_129S1SvImJ_T0014260.1 MGP_129S1SvImJ_G0012349.1 mouse_genomes_project 3 110792840 110793705 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062678.1 MGP_129S1SvImJ_G0027645.1 mouse_genomes_project 3 98644543 98860995 - MGP_129S1SvImJ_P0062678 Pde4dip protein_coding protein_coding MGP_129S1SvImJ_T0062679.1 MGP_129S1SvImJ_G0027645.1 mouse_genomes_project 3 98644549 98649747 - Pde4dip protein_coding processed_transcript MGP_129S1SvImJ_T0062680.1 MGP_129S1SvImJ_G0027645.1 mouse_genomes_project 3 98644584 98860995 - MGP_129S1SvImJ_P0062680 Pde4dip protein_coding protein_coding MGP_129S1SvImJ_T0062681.1 MGP_129S1SvImJ_G0027645.1 mouse_genomes_project 3 98649704 98651991 - Pde4dip protein_coding processed_transcript MGP_129S1SvImJ_T0062682.1 MGP_129S1SvImJ_G0027645.1 mouse_genomes_project 3 98697246 98726023 - MGP_129S1SvImJ_P0062682 Pde4dip protein_coding protein_coding MGP_129S1SvImJ_T0062683.1 MGP_129S1SvImJ_G0027645.1 mouse_genomes_project 3 98699209 98725945 - MGP_129S1SvImJ_P0062683 Pde4dip protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062684.1 MGP_129S1SvImJ_G0027645.1 mouse_genomes_project 3 98704715 98837032 - MGP_129S1SvImJ_P0062684 Pde4dip protein_coding protein_coding MGP_129S1SvImJ_T0062685.1 MGP_129S1SvImJ_G0027645.1 mouse_genomes_project 3 98761066 98790427 - MGP_129S1SvImJ_P0062685 Pde4dip protein_coding protein_coding MGP_129S1SvImJ_T0062686.1 MGP_129S1SvImJ_G0027645.1 mouse_genomes_project 3 98786759 98836981 - Pde4dip protein_coding retained_intron MGP_129S1SvImJ_T0060671.1 MGP_129S1SvImJ_G0027185.1 mouse_genomes_project 3 39070444 39087158 - MGP_129S1SvImJ_P0060671 Pgrmc2 protein_coding protein_coding MGP_129S1SvImJ_T0060672.1 MGP_129S1SvImJ_G0027185.1 mouse_genomes_project 3 39072638 39074789 - Pgrmc2 protein_coding retained_intron MGP_129S1SvImJ_T0001355.1 MGP_129S1SvImJ_G0001279.1 mouse_genomes_project 3 130231129 130233489 - TEC TEC MGP_129S1SvImJ_T0001162.1 MGP_129S1SvImJ_G0001088.1 mouse_genomes_project 3 31594676 31595624 + TEC TEC MGP_129S1SvImJ_T0001238.1 MGP_129S1SvImJ_G0001162.1 mouse_genomes_project 3 54319256 54321609 + TEC TEC MGP_129S1SvImJ_T0001367.1 MGP_129S1SvImJ_G0001290.1 mouse_genomes_project 3 133327799 133330638 + TEC TEC MGP_129S1SvImJ_T0061074.1 MGP_129S1SvImJ_G0027271.1 mouse_genomes_project 3 64492157 64505682 - MGP_129S1SvImJ_P0061074 Ssr3 protein_coding protein_coding MGP_129S1SvImJ_T0061075.1 MGP_129S1SvImJ_G0027271.1 mouse_genomes_project 3 64494181 64495883 - Ssr3 protein_coding retained_intron MGP_129S1SvImJ_T0061076.1 MGP_129S1SvImJ_G0027271.1 mouse_genomes_project 3 64494531 64505612 - MGP_129S1SvImJ_P0061076 Ssr3 protein_coding protein_coding MGP_129S1SvImJ_T0064354.1 MGP_129S1SvImJ_G0027990.1 mouse_genomes_project 3 156129661 156194027 - MGP_129S1SvImJ_P0064354 Fam73a protein_coding protein_coding MGP_129S1SvImJ_T0064355.1 MGP_129S1SvImJ_G0027990.1 mouse_genomes_project 3 156131743 156194025 - MGP_129S1SvImJ_P0064355 Fam73a protein_coding protein_coding MGP_129S1SvImJ_T0064356.1 MGP_129S1SvImJ_G0027990.1 mouse_genomes_project 3 156137265 156194003 - MGP_129S1SvImJ_P0064356 Fam73a protein_coding protein_coding MGP_129S1SvImJ_T0064357.1 MGP_129S1SvImJ_G0027990.1 mouse_genomes_project 3 156137432 156142380 - Fam73a protein_coding retained_intron MGP_129S1SvImJ_T0064358.1 MGP_129S1SvImJ_G0027990.1 mouse_genomes_project 3 156148397 156179630 - MGP_129S1SvImJ_P0064358 Fam73a protein_coding protein_coding MGP_129S1SvImJ_T0064359.1 MGP_129S1SvImJ_G0027990.1 mouse_genomes_project 3 156148571 156155334 - Fam73a protein_coding retained_intron MGP_129S1SvImJ_T0064360.1 MGP_129S1SvImJ_G0027990.1 mouse_genomes_project 3 156154876 156190312 - MGP_129S1SvImJ_P0064360 Fam73a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064361.1 MGP_129S1SvImJ_G0027990.1 mouse_genomes_project 3 156189858 156194004 - Fam73a protein_coding retained_intron MGP_129S1SvImJ_T0062727.1 MGP_129S1SvImJ_G0027663.1 mouse_genomes_project 3 100319828 100398619 + MGP_129S1SvImJ_P0062727 Tbx15 protein_coding protein_coding MGP_129S1SvImJ_T0062728.1 MGP_129S1SvImJ_G0027663.1 mouse_genomes_project 3 100333157 100442100 + MGP_129S1SvImJ_P0062728 Tbx15 protein_coding protein_coding MGP_129S1SvImJ_T0062729.1 MGP_129S1SvImJ_G0027663.1 mouse_genomes_project 3 100382056 100401794 + MGP_129S1SvImJ_P0062729 Tbx15 protein_coding protein_coding MGP_129S1SvImJ_T0004279.1 MGP_129S1SvImJ_G0003767.1 mouse_genomes_project 3 82696308 82767401 + Rbm46os antisense antisense MGP_129S1SvImJ_T0004280.1 MGP_129S1SvImJ_G0003767.1 mouse_genomes_project 3 82696308 82765483 + Rbm46os antisense antisense MGP_129S1SvImJ_T0004281.1 MGP_129S1SvImJ_G0003767.1 mouse_genomes_project 3 82696349 82765518 + Rbm46os antisense antisense MGP_129S1SvImJ_T0004282.1 MGP_129S1SvImJ_G0003767.1 mouse_genomes_project 3 82725563 82768046 + Rbm46os antisense antisense MGP_129S1SvImJ_T0062112.1 MGP_129S1SvImJ_G0027486.1 mouse_genomes_project 3 92545062 92546778 - MGP_129S1SvImJ_P0062112 Prr9 protein_coding protein_coding MGP_129S1SvImJ_T0063041.1 MGP_129S1SvImJ_G0027730.1 mouse_genomes_project 3 107545524 107648948 - MGP_129S1SvImJ_P0063041 Chil3 protein_coding protein_coding MGP_129S1SvImJ_T0063042.1 MGP_129S1SvImJ_G0027730.1 mouse_genomes_project 3 107546567 107547746 - MGP_129S1SvImJ_P0063042 Chil3 protein_coding protein_coding MGP_129S1SvImJ_T0063043.1 MGP_129S1SvImJ_G0027730.1 mouse_genomes_project 3 107553675 107558177 - Chil3 protein_coding retained_intron MGP_129S1SvImJ_T0013999.1 MGP_129S1SvImJ_G0012088.1 mouse_genomes_project 3 33263391 33264310 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001165.1 MGP_129S1SvImJ_G0001091.1 mouse_genomes_project 3 32323356 32326189 + TEC TEC MGP_129S1SvImJ_T0001375.1 MGP_129S1SvImJ_G0001298.1 mouse_genomes_project 3 135593731 135596954 + TEC TEC MGP_129S1SvImJ_T0004253.1 MGP_129S1SvImJ_G0003746.1 mouse_genomes_project 3 50797002 50798003 - Gm20402 antisense antisense MGP_129S1SvImJ_T0061875.1 MGP_129S1SvImJ_G0027436.1 mouse_genomes_project 3 89613744 89615550 - MGP_129S1SvImJ_P0061875 Lenep protein_coding protein_coding MGP_129S1SvImJ_T0014318.1 MGP_129S1SvImJ_G0012407.1 mouse_genomes_project 3 131929211 131929975 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014034.1 MGP_129S1SvImJ_G0012123.1 mouse_genomes_project 3 43500711 43500961 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062400.1 MGP_129S1SvImJ_G0027582.1 mouse_genomes_project 3 96039140 96046133 + MGP_129S1SvImJ_P0062400 Cers2 protein_coding protein_coding MGP_129S1SvImJ_T0062401.1 MGP_129S1SvImJ_G0027582.1 mouse_genomes_project 3 96039433 96047852 + MGP_129S1SvImJ_P0062401 Cers2 protein_coding protein_coding MGP_129S1SvImJ_T0062402.1 MGP_129S1SvImJ_G0027582.1 mouse_genomes_project 3 96039596 96045026 + Cers2 protein_coding retained_intron MGP_129S1SvImJ_T0062403.1 MGP_129S1SvImJ_G0027582.1 mouse_genomes_project 3 96039616 96045576 + Cers2 protein_coding retained_intron MGP_129S1SvImJ_T0062404.1 MGP_129S1SvImJ_G0027582.1 mouse_genomes_project 3 96041598 96044803 + Cers2 protein_coding retained_intron MGP_129S1SvImJ_T0062405.1 MGP_129S1SvImJ_G0027582.1 mouse_genomes_project 3 96042269 96045295 + MGP_129S1SvImJ_P0062405 Cers2 protein_coding protein_coding MGP_129S1SvImJ_T0062406.1 MGP_129S1SvImJ_G0027582.1 mouse_genomes_project 3 96043043 96046208 + MGP_129S1SvImJ_P0062406 Cers2 protein_coding protein_coding MGP_129S1SvImJ_T0062407.1 MGP_129S1SvImJ_G0027582.1 mouse_genomes_project 3 96044385 96046925 + Cers2 protein_coding retained_intron MGP_129S1SvImJ_T0062408.1 MGP_129S1SvImJ_G0027582.1 mouse_genomes_project 3 96045192 96046210 + Cers2 protein_coding retained_intron MGP_129S1SvImJ_T0063965.1 MGP_129S1SvImJ_G0027916.1 mouse_genomes_project 3 140634730 140638504 + Ddit4l protein_coding processed_transcript MGP_129S1SvImJ_T0063966.1 MGP_129S1SvImJ_G0027916.1 mouse_genomes_project 3 140636781 140641442 + MGP_129S1SvImJ_P0063966 Ddit4l protein_coding protein_coding MGP_129S1SvImJ_T0063967.1 MGP_129S1SvImJ_G0027916.1 mouse_genomes_project 3 140637146 140639279 + MGP_129S1SvImJ_P0063967 Ddit4l protein_coding protein_coding MGP_129S1SvImJ_T0014132.1 MGP_129S1SvImJ_G0012221.1 mouse_genomes_project 3 71536317 71536536 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001227.1 MGP_129S1SvImJ_G0001151.1 mouse_genomes_project 3 50811416 50814282 + TEC TEC MGP_129S1SvImJ_T0001273.1 MGP_129S1SvImJ_G0001197.1 mouse_genomes_project 3 84840562 84844466 + TEC TEC MGP_129S1SvImJ_T0064056.1 MGP_129S1SvImJ_G0027936.1 mouse_genomes_project 3 142305164 142797463 + MGP_129S1SvImJ_P0064056 Stpg2 protein_coding protein_coding MGP_129S1SvImJ_T0064057.1 MGP_129S1SvImJ_G0027936.1 mouse_genomes_project 3 142305363 142798152 + MGP_129S1SvImJ_P0064057 Stpg2 protein_coding protein_coding MGP_129S1SvImJ_T0001393.1 MGP_129S1SvImJ_G0001316.1 mouse_genomes_project 3 152181610 152182150 + TEC TEC MGP_129S1SvImJ_T0062382.1 MGP_129S1SvImJ_G0027579.1 mouse_genomes_project 3 95967944 95999743 - MGP_129S1SvImJ_P0062382 Prune protein_coding protein_coding MGP_129S1SvImJ_T0062383.1 MGP_129S1SvImJ_G0027579.1 mouse_genomes_project 3 95981476 95985266 - Prune protein_coding retained_intron MGP_129S1SvImJ_T0001213.1 MGP_129S1SvImJ_G0001139.1 mouse_genomes_project 3 50177136 50178498 + TEC TEC MGP_129S1SvImJ_T0001214.1 MGP_129S1SvImJ_G0001139.1 mouse_genomes_project 3 50177191 50178498 + TEC TEC MGP_129S1SvImJ_T0098750.1 MGP_129S1SvImJ_G0036835.1 mouse_genomes_project 3 88876955 88877083 + Gm25820 scaRNA scaRNA MGP_129S1SvImJ_T0014104.1 MGP_129S1SvImJ_G0012193.1 mouse_genomes_project 3 65166168 65168381 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062433.1 MGP_129S1SvImJ_G0027588.1 mouse_genomes_project 3 96343708 96374933 + MGP_129S1SvImJ_P0062433 protein_coding protein_coding MGP_129S1SvImJ_T0062434.1 MGP_129S1SvImJ_G0027588.1 mouse_genomes_project 3 96343708 96374938 + MGP_129S1SvImJ_P0062434 protein_coding protein_coding MGP_129S1SvImJ_T0062435.1 MGP_129S1SvImJ_G0027588.1 mouse_genomes_project 3 96343708 96374938 + MGP_129S1SvImJ_P0062435 protein_coding protein_coding MGP_129S1SvImJ_T0062436.1 MGP_129S1SvImJ_G0027588.1 mouse_genomes_project 3 96343743 96373255 + MGP_129S1SvImJ_P0062436 protein_coding protein_coding MGP_129S1SvImJ_T0062437.1 MGP_129S1SvImJ_G0027588.1 mouse_genomes_project 3 96343743 96374932 + MGP_129S1SvImJ_P0062437 protein_coding protein_coding MGP_129S1SvImJ_T0062438.1 MGP_129S1SvImJ_G0027588.1 mouse_genomes_project 3 96343748 96374931 + MGP_129S1SvImJ_P0062438 protein_coding protein_coding MGP_129S1SvImJ_T0062439.1 MGP_129S1SvImJ_G0027588.1 mouse_genomes_project 3 96343755 96374932 + MGP_129S1SvImJ_P0062439 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062440.1 MGP_129S1SvImJ_G0027588.1 mouse_genomes_project 3 96343764 96373186 + MGP_129S1SvImJ_P0062440 protein_coding protein_coding MGP_129S1SvImJ_T0014152.1 MGP_129S1SvImJ_G0012241.1 mouse_genomes_project 3 79807309 79808393 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062481.1 MGP_129S1SvImJ_G0027594.1 mouse_genomes_project 3 96528898 96591472 - MGP_129S1SvImJ_P0062481 Rprd2 protein_coding protein_coding MGP_129S1SvImJ_T0062482.1 MGP_129S1SvImJ_G0027594.1 mouse_genomes_project 3 96529364 96591479 - MGP_129S1SvImJ_P0062482 Rprd2 protein_coding protein_coding MGP_129S1SvImJ_T0062483.1 MGP_129S1SvImJ_G0027594.1 mouse_genomes_project 3 96539570 96545790 - Rprd2 protein_coding retained_intron MGP_129S1SvImJ_T0062484.1 MGP_129S1SvImJ_G0027594.1 mouse_genomes_project 3 96541268 96591498 - MGP_129S1SvImJ_P0062484 Rprd2 protein_coding protein_coding MGP_129S1SvImJ_T0062485.1 MGP_129S1SvImJ_G0027594.1 mouse_genomes_project 3 96542083 96545768 - Rprd2 protein_coding processed_transcript MGP_129S1SvImJ_T0062486.1 MGP_129S1SvImJ_G0027594.1 mouse_genomes_project 3 96553903 96591583 - Rprd2 protein_coding retained_intron MGP_129S1SvImJ_T0063406.1 MGP_129S1SvImJ_G0027815.1 mouse_genomes_project 3 118540850 118572142 - MGP_129S1SvImJ_P0063406 Mfsd14a protein_coding protein_coding MGP_129S1SvImJ_T0063407.1 MGP_129S1SvImJ_G0027815.1 mouse_genomes_project 3 118542242 118546131 - Mfsd14a protein_coding retained_intron MGP_129S1SvImJ_T0063408.1 MGP_129S1SvImJ_G0027815.1 mouse_genomes_project 3 118550988 118555440 - Mfsd14a protein_coding retained_intron MGP_129S1SvImJ_T0063410.1 MGP_129S1SvImJ_G0027815.1 mouse_genomes_project 3 118557826 118571956 - Mfsd14a protein_coding retained_intron MGP_129S1SvImJ_T0063411.1 MGP_129S1SvImJ_G0027815.1 mouse_genomes_project 3 118560586 118572075 - Mfsd14a protein_coding retained_intron MGP_129S1SvImJ_T0007457.1 MGP_129S1SvImJ_G0006119.1 mouse_genomes_project 3 6291928 6323070 + C030034L19Rik lincRNA lincRNA MGP_129S1SvImJ_T0007458.1 MGP_129S1SvImJ_G0006119.1 mouse_genomes_project 3 6291932 6323986 + C030034L19Rik lincRNA lincRNA MGP_129S1SvImJ_T0007459.1 MGP_129S1SvImJ_G0006119.1 mouse_genomes_project 3 6291944 6302759 + C030034L19Rik lincRNA lincRNA MGP_129S1SvImJ_T0062195.1 MGP_129S1SvImJ_G0027549.1 mouse_genomes_project 3 94986626 95003949 + MGP_129S1SvImJ_P0062195 Tdrkh protein_coding protein_coding MGP_129S1SvImJ_T0062196.1 MGP_129S1SvImJ_G0027549.1 mouse_genomes_project 3 94986650 94998975 + MGP_129S1SvImJ_P0062196 Tdrkh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062197.1 MGP_129S1SvImJ_G0027549.1 mouse_genomes_project 3 94986667 94999728 + MGP_129S1SvImJ_P0062197 Tdrkh protein_coding protein_coding MGP_129S1SvImJ_T0062198.1 MGP_129S1SvImJ_G0027549.1 mouse_genomes_project 3 94996140 95004851 + MGP_129S1SvImJ_P0062198 Tdrkh protein_coding protein_coding MGP_129S1SvImJ_T0062199.1 MGP_129S1SvImJ_G0027549.1 mouse_genomes_project 3 94996140 95004838 + MGP_129S1SvImJ_P0062199 Tdrkh protein_coding protein_coding MGP_129S1SvImJ_T0102510.1 MGP_129S1SvImJ_G0040344.1 mouse_genomes_project 3 159569385 159570256 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0001268.1 MGP_129S1SvImJ_G0001192.1 mouse_genomes_project 3 77350553 77352056 - TEC TEC MGP_129S1SvImJ_T0007519.1 MGP_129S1SvImJ_G0006163.1 mouse_genomes_project 3 35630787 35637052 + Gm42921 lincRNA lincRNA MGP_129S1SvImJ_T0014103.1 MGP_129S1SvImJ_G0012192.1 mouse_genomes_project 3 65122183 65124775 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064199.1 MGP_129S1SvImJ_G0027966.1 mouse_genomes_project 3 149517550 149581215 - MGP_129S1SvImJ_P0064199 Wdr63 protein_coding protein_coding MGP_129S1SvImJ_T0064200.1 MGP_129S1SvImJ_G0027966.1 mouse_genomes_project 3 149517552 149526018 - Wdr63 protein_coding processed_transcript MGP_129S1SvImJ_T0064201.1 MGP_129S1SvImJ_G0027966.1 mouse_genomes_project 3 149519799 149527270 - Wdr63 protein_coding processed_transcript MGP_129S1SvImJ_T0014324.1 MGP_129S1SvImJ_G0012413.1 mouse_genomes_project 3 133694100 133695405 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014044.1 MGP_129S1SvImJ_G0012133.1 mouse_genomes_project 3 48027040 48027356 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007637.1 MGP_129S1SvImJ_G0006248.1 mouse_genomes_project 3 97256772 97257637 - 4930477E14Rik lincRNA lincRNA MGP_129S1SvImJ_T0014254.1 MGP_129S1SvImJ_G0012343.1 mouse_genomes_project 3 109521693 109522096 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062989.1 MGP_129S1SvImJ_G0027715.1 mouse_genomes_project 3 106341251 106391029 - MGP_129S1SvImJ_P0062989 Cttnbp2nl protein_coding protein_coding MGP_129S1SvImJ_T0062990.1 MGP_129S1SvImJ_G0027715.1 mouse_genomes_project 3 106341253 106390834 - MGP_129S1SvImJ_P0062990 Cttnbp2nl protein_coding protein_coding MGP_129S1SvImJ_T0062991.1 MGP_129S1SvImJ_G0027715.1 mouse_genomes_project 3 106345401 106390837 - MGP_129S1SvImJ_P0062991 Cttnbp2nl protein_coding protein_coding MGP_129S1SvImJ_T0062992.1 MGP_129S1SvImJ_G0027715.1 mouse_genomes_project 3 106345431 106390808 - Cttnbp2nl protein_coding retained_intron MGP_129S1SvImJ_T0001150.1 MGP_129S1SvImJ_G0001076.1 mouse_genomes_project 3 27745897 27747961 - TEC TEC MGP_129S1SvImJ_T0013963.1 MGP_129S1SvImJ_G0012052.1 mouse_genomes_project 3 15745548 15746750 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014253.1 MGP_129S1SvImJ_G0012342.1 mouse_genomes_project 3 109507319 109507556 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001199.1 MGP_129S1SvImJ_G0001125.1 mouse_genomes_project 3 49097865 49101930 - TEC TEC MGP_129S1SvImJ_T0001191.1 MGP_129S1SvImJ_G0001117.1 mouse_genomes_project 3 43432387 43434826 - TEC TEC MGP_129S1SvImJ_T0001377.1 MGP_129S1SvImJ_G0001300.1 mouse_genomes_project 3 135841939 135843600 - TEC TEC MGP_129S1SvImJ_T0101021.1 MGP_129S1SvImJ_G0039088.1 mouse_genomes_project 3 45482685 45482823 + Gm23891 snoRNA snoRNA MGP_129S1SvImJ_T0014328.1 MGP_129S1SvImJ_G0012417.1 mouse_genomes_project 3 135429617 135430005 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060075.1 MGP_129S1SvImJ_G0027070.1 mouse_genomes_project 3 7410612 7433530 - MGP_129S1SvImJ_P0060075 Snx16 protein_coding protein_coding MGP_129S1SvImJ_T0060076.1 MGP_129S1SvImJ_G0027070.1 mouse_genomes_project 3 7410941 7433515 - MGP_129S1SvImJ_P0060076 Snx16 protein_coding protein_coding MGP_129S1SvImJ_T0060077.1 MGP_129S1SvImJ_G0027070.1 mouse_genomes_project 3 7411732 7433528 - MGP_129S1SvImJ_P0060077 Snx16 protein_coding protein_coding MGP_129S1SvImJ_T0011835.1 MGP_129S1SvImJ_G0009941.1 mouse_genomes_project 3 92816891 92818206 + MGP_129S1SvImJ_P0011835 Sprr2g polymorphic_pseudogene protein_coding MGP_129S1SvImJ_T0061298.1 MGP_129S1SvImJ_G0027321.1 mouse_genomes_project 3 80812412 81001150 + MGP_129S1SvImJ_P0061298 Pdgfc protein_coding protein_coding MGP_129S1SvImJ_T0061299.1 MGP_129S1SvImJ_G0027321.1 mouse_genomes_project 3 80813168 81001144 + MGP_129S1SvImJ_P0061299 Pdgfc protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061300.1 MGP_129S1SvImJ_G0027321.1 mouse_genomes_project 3 80813420 80997880 + MGP_129S1SvImJ_P0061300 Pdgfc protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061219.1 MGP_129S1SvImJ_G0027306.1 mouse_genomes_project 3 74987602 75028879 - MGP_129S1SvImJ_P0061219 Pdcd10 protein_coding protein_coding MGP_129S1SvImJ_T0061220.1 MGP_129S1SvImJ_G0027306.1 mouse_genomes_project 3 74987763 74991518 - Pdcd10 protein_coding retained_intron MGP_129S1SvImJ_T0061221.1 MGP_129S1SvImJ_G0027306.1 mouse_genomes_project 3 74999367 75028813 - MGP_129S1SvImJ_P0061221 Pdcd10 protein_coding protein_coding MGP_129S1SvImJ_T0061222.1 MGP_129S1SvImJ_G0027306.1 mouse_genomes_project 3 75003870 75028891 - Pdcd10 protein_coding retained_intron MGP_129S1SvImJ_T0007471.1 MGP_129S1SvImJ_G0006128.1 mouse_genomes_project 3 14497318 14502956 - Gm30340 lincRNA lincRNA MGP_129S1SvImJ_T0061475.1 MGP_129S1SvImJ_G0027367.1 mouse_genomes_project 3 87868580 87892809 - MGP_129S1SvImJ_P0061475 Pear1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061476.1 MGP_129S1SvImJ_G0027367.1 mouse_genomes_project 3 87869784 87892814 - MGP_129S1SvImJ_P0061476 Pear1 protein_coding protein_coding MGP_129S1SvImJ_T0061477.1 MGP_129S1SvImJ_G0027367.1 mouse_genomes_project 3 87869784 87950917 - MGP_129S1SvImJ_P0061477 Pear1 protein_coding protein_coding MGP_129S1SvImJ_T0061478.1 MGP_129S1SvImJ_G0027367.1 mouse_genomes_project 3 87869784 87950866 - MGP_129S1SvImJ_P0061478 Pear1 protein_coding protein_coding MGP_129S1SvImJ_T0061479.1 MGP_129S1SvImJ_G0027367.1 mouse_genomes_project 3 87869785 87886055 - Pear1 protein_coding retained_intron MGP_129S1SvImJ_T0061480.1 MGP_129S1SvImJ_G0027367.1 mouse_genomes_project 3 87869785 87892810 - MGP_129S1SvImJ_P0061480 Pear1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061481.1 MGP_129S1SvImJ_G0027367.1 mouse_genomes_project 3 87869785 87892804 - MGP_129S1SvImJ_P0061481 Pear1 protein_coding protein_coding MGP_129S1SvImJ_T0061482.1 MGP_129S1SvImJ_G0027367.1 mouse_genomes_project 3 87869793 87874998 - Pear1 protein_coding retained_intron MGP_129S1SvImJ_T0061483.1 MGP_129S1SvImJ_G0027367.1 mouse_genomes_project 3 87870587 87892804 - MGP_129S1SvImJ_P0061483 Pear1 protein_coding protein_coding MGP_129S1SvImJ_T0061484.1 MGP_129S1SvImJ_G0027367.1 mouse_genomes_project 3 87872150 87874627 - MGP_129S1SvImJ_P0061484 Pear1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061485.1 MGP_129S1SvImJ_G0027367.1 mouse_genomes_project 3 87873131 87877615 - MGP_129S1SvImJ_P0061485 Pear1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061486.1 MGP_129S1SvImJ_G0027367.1 mouse_genomes_project 3 87877313 87892804 - MGP_129S1SvImJ_P0061486 Pear1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061487.1 MGP_129S1SvImJ_G0027367.1 mouse_genomes_project 3 87878620 87892816 - Pear1 protein_coding retained_intron MGP_129S1SvImJ_T0061488.1 MGP_129S1SvImJ_G0027367.1 mouse_genomes_project 3 87879060 87892804 - MGP_129S1SvImJ_P0061488 Pear1 protein_coding protein_coding MGP_129S1SvImJ_T0061489.1 MGP_129S1SvImJ_G0027367.1 mouse_genomes_project 3 87879073 87892804 - MGP_129S1SvImJ_P0061489 Pear1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061490.1 MGP_129S1SvImJ_G0027367.1 mouse_genomes_project 3 87879087 87892827 - MGP_129S1SvImJ_P0061490 Pear1 protein_coding protein_coding MGP_129S1SvImJ_T0061491.1 MGP_129S1SvImJ_G0027367.1 mouse_genomes_project 3 87883227 87892796 - MGP_129S1SvImJ_P0061491 Pear1 protein_coding protein_coding MGP_129S1SvImJ_T0101048.1 MGP_129S1SvImJ_G0039115.1 mouse_genomes_project 3 95777038 95777123 - Gm24920 snoRNA snoRNA MGP_129S1SvImJ_T0063161.1 MGP_129S1SvImJ_G0027763.1 mouse_genomes_project 3 109567101 109571369 - MGP_129S1SvImJ_P0063161 Gstm4 protein_coding protein_coding MGP_129S1SvImJ_T0014049.1 MGP_129S1SvImJ_G0012138.1 mouse_genomes_project 3 48635386 48635618 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007786.1 MGP_129S1SvImJ_G0006368.1 mouse_genomes_project 3 155730446 155734189 + lincRNA lincRNA MGP_129S1SvImJ_T0001175.1 MGP_129S1SvImJ_G0001101.1 mouse_genomes_project 3 35501970 35505293 - TEC TEC MGP_129S1SvImJ_T0063789.1 MGP_129S1SvImJ_G0027883.1 mouse_genomes_project 3 133477099 133480139 - MGP_129S1SvImJ_P0063789 Rpl34 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0063790.1 MGP_129S1SvImJ_G0027883.1 mouse_genomes_project 3 133477102 133481204 - MGP_129S1SvImJ_P0063790 Rpl34 protein_coding protein_coding MGP_129S1SvImJ_T0063791.1 MGP_129S1SvImJ_G0027883.1 mouse_genomes_project 3 133477105 133477678 - Rpl34 protein_coding retained_intron MGP_129S1SvImJ_T0063792.1 MGP_129S1SvImJ_G0027883.1 mouse_genomes_project 3 133477110 133481265 - MGP_129S1SvImJ_P0063792 Rpl34 protein_coding protein_coding MGP_129S1SvImJ_T0063793.1 MGP_129S1SvImJ_G0027883.1 mouse_genomes_project 3 133477135 133481209 - Rpl34 protein_coding retained_intron MGP_129S1SvImJ_T0063794.1 MGP_129S1SvImJ_G0027883.1 mouse_genomes_project 3 133477147 133481188 - MGP_129S1SvImJ_P0063794 Rpl34 protein_coding protein_coding MGP_129S1SvImJ_T0063795.1 MGP_129S1SvImJ_G0027883.1 mouse_genomes_project 3 133478600 133481201 - MGP_129S1SvImJ_P0063795 Rpl34 protein_coding protein_coding MGP_129S1SvImJ_T0063796.1 MGP_129S1SvImJ_G0027883.1 mouse_genomes_project 3 133479412 133481214 - Rpl34 protein_coding retained_intron MGP_129S1SvImJ_T0063797.1 MGP_129S1SvImJ_G0027883.1 mouse_genomes_project 3 133479683 133481213 - MGP_129S1SvImJ_P0063797 Rpl34 protein_coding protein_coding MGP_129S1SvImJ_T0060015.1 MGP_129S1SvImJ_G0027051.1 mouse_genomes_project 3 4406586 4445232 - MGP_129S1SvImJ_P0060015 Il7 protein_coding protein_coding MGP_129S1SvImJ_T0060016.1 MGP_129S1SvImJ_G0027051.1 mouse_genomes_project 3 4406680 4445793 - Il7 protein_coding processed_transcript MGP_129S1SvImJ_T0001419.1 MGP_129S1SvImJ_G0001342.1 mouse_genomes_project 3 162338058 162339406 + TEC TEC MGP_129S1SvImJ_T0014292.1 MGP_129S1SvImJ_G0012381.1 mouse_genomes_project 3 122087177 122087985 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001176.1 MGP_129S1SvImJ_G0001102.1 mouse_genomes_project 3 35509250 35512705 + TEC TEC MGP_129S1SvImJ_T0060943.1 MGP_129S1SvImJ_G0027236.1 mouse_genomes_project 3 57366952 57401145 + MGP_129S1SvImJ_P0060943 Eif2a protein_coding protein_coding MGP_129S1SvImJ_T0060944.1 MGP_129S1SvImJ_G0027236.1 mouse_genomes_project 3 57367173 57389033 + Eif2a protein_coding retained_intron MGP_129S1SvImJ_T0060945.1 MGP_129S1SvImJ_G0027236.1 mouse_genomes_project 3 57367174 57399288 + MGP_129S1SvImJ_P0060945 Eif2a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060946.1 MGP_129S1SvImJ_G0027236.1 mouse_genomes_project 3 57367187 57401145 + MGP_129S1SvImJ_P0060946 Eif2a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060947.1 MGP_129S1SvImJ_G0027236.1 mouse_genomes_project 3 57367434 57388821 + MGP_129S1SvImJ_P0060947 Eif2a protein_coding protein_coding MGP_129S1SvImJ_T0060948.1 MGP_129S1SvImJ_G0027236.1 mouse_genomes_project 3 57385734 57389033 + Eif2a protein_coding retained_intron MGP_129S1SvImJ_T0060949.1 MGP_129S1SvImJ_G0027236.1 mouse_genomes_project 3 57387442 57394103 + Eif2a protein_coding retained_intron MGP_129S1SvImJ_T0007451.1 MGP_129S1SvImJ_G0006115.1 mouse_genomes_project 3 4738518 4769899 - 1700010I02Rik lincRNA lincRNA MGP_129S1SvImJ_T0007452.1 MGP_129S1SvImJ_G0006115.1 mouse_genomes_project 3 4738518 4769906 - 1700010I02Rik lincRNA lincRNA MGP_129S1SvImJ_T0001229.1 MGP_129S1SvImJ_G0001153.1 mouse_genomes_project 3 51663943 51666603 + TEC TEC MGP_129S1SvImJ_T0007793.1 MGP_129S1SvImJ_G0006374.1 mouse_genomes_project 3 160639372 160660924 - 4930570G19Rik lincRNA lincRNA MGP_129S1SvImJ_T0007794.1 MGP_129S1SvImJ_G0006374.1 mouse_genomes_project 3 160639380 160660819 - 4930570G19Rik lincRNA lincRNA MGP_129S1SvImJ_T0007795.1 MGP_129S1SvImJ_G0006374.1 mouse_genomes_project 3 160641039 160660912 - 4930570G19Rik lincRNA lincRNA MGP_129S1SvImJ_T0007796.1 MGP_129S1SvImJ_G0006374.1 mouse_genomes_project 3 160654469 160660983 - 4930570G19Rik lincRNA lincRNA MGP_129S1SvImJ_T0060325.1 MGP_129S1SvImJ_G0027124.1 mouse_genomes_project 3 28142278 28169259 + MGP_129S1SvImJ_P0060325 Lrriq4 protein_coding protein_coding MGP_129S1SvImJ_T0060326.1 MGP_129S1SvImJ_G0027124.1 mouse_genomes_project 3 28143101 28169127 + MGP_129S1SvImJ_P0060326 Lrriq4 protein_coding protein_coding MGP_129S1SvImJ_T0060327.1 MGP_129S1SvImJ_G0027124.1 mouse_genomes_project 3 28145657 28169127 + MGP_129S1SvImJ_P0060327 Lrriq4 protein_coding protein_coding MGP_129S1SvImJ_T0062719.1 MGP_129S1SvImJ_G0027660.1 mouse_genomes_project 3 99893339 99902646 - MGP_129S1SvImJ_P0062719 Hsd3b1 protein_coding protein_coding MGP_129S1SvImJ_T0062720.1 MGP_129S1SvImJ_G0027660.1 mouse_genomes_project 3 99893341 99902646 - MGP_129S1SvImJ_P0062720 Hsd3b1 protein_coding protein_coding MGP_129S1SvImJ_T0013977.1 MGP_129S1SvImJ_G0012066.1 mouse_genomes_project 3 19619514 19620464 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011566.1 MGP_129S1SvImJ_G0009682.1 mouse_genomes_project 3 97271340 97271763 - Terc misc_RNA misc_RNA MGP_129S1SvImJ_T0064185.1 MGP_129S1SvImJ_G0027963.1 mouse_genomes_project 3 149377556 149379924 + Bcl10 protein_coding retained_intron MGP_129S1SvImJ_T0064186.1 MGP_129S1SvImJ_G0027963.1 mouse_genomes_project 3 149379014 149391260 + MGP_129S1SvImJ_P0064186 Bcl10 protein_coding protein_coding MGP_129S1SvImJ_T0064187.1 MGP_129S1SvImJ_G0027963.1 mouse_genomes_project 3 149379109 149382684 + Bcl10 protein_coding processed_transcript MGP_129S1SvImJ_T0001184.1 MGP_129S1SvImJ_G0001110.1 mouse_genomes_project 3 39004350 39005273 - TEC TEC MGP_129S1SvImJ_T0014218.1 MGP_129S1SvImJ_G0012307.1 mouse_genomes_project 3 100163242 100163826 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013938.1 MGP_129S1SvImJ_G0012027.1 mouse_genomes_project 3 8658686 8659700 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007718.1 MGP_129S1SvImJ_G0006314.1 mouse_genomes_project 3 136460798 136479287 - Gm42563 lincRNA lincRNA MGP_129S1SvImJ_T0063952.1 MGP_129S1SvImJ_G0027913.1 mouse_genomes_project 3 139644746 139779869 + Ppp3ca protein_coding processed_transcript MGP_129S1SvImJ_T0063953.1 MGP_129S1SvImJ_G0027913.1 mouse_genomes_project 3 139644746 139922903 + MGP_129S1SvImJ_P0063953 Ppp3ca protein_coding protein_coding MGP_129S1SvImJ_T0063954.1 MGP_129S1SvImJ_G0027913.1 mouse_genomes_project 3 139645392 139920268 + MGP_129S1SvImJ_P0063954 Ppp3ca protein_coding protein_coding MGP_129S1SvImJ_T0063955.1 MGP_129S1SvImJ_G0027913.1 mouse_genomes_project 3 139818397 139865907 + Ppp3ca protein_coding processed_transcript MGP_129S1SvImJ_T0063956.1 MGP_129S1SvImJ_G0027913.1 mouse_genomes_project 3 139864840 139867487 + Ppp3ca protein_coding retained_intron MGP_129S1SvImJ_T0063957.1 MGP_129S1SvImJ_G0027913.1 mouse_genomes_project 3 139872344 139874381 + Ppp3ca protein_coding retained_intron MGP_129S1SvImJ_T0063958.1 MGP_129S1SvImJ_G0027913.1 mouse_genomes_project 3 139886717 139913105 + Ppp3ca protein_coding processed_transcript MGP_129S1SvImJ_T0063959.1 MGP_129S1SvImJ_G0027913.1 mouse_genomes_project 3 139887533 139890044 + Ppp3ca protein_coding retained_intron MGP_129S1SvImJ_T0060902.1 MGP_129S1SvImJ_G0027226.1 mouse_genomes_project 3 54533484 54535976 + MGP_129S1SvImJ_P0060902 Mab21l1 protein_coding protein_coding MGP_129S1SvImJ_T0001264.1 MGP_129S1SvImJ_G0001188.1 mouse_genomes_project 3 75175717 75176230 - TEC TEC MGP_129S1SvImJ_T0060065.1 MGP_129S1SvImJ_G0027067.1 mouse_genomes_project 3 7313934 7317855 - MGP_129S1SvImJ_P0060065 Slc10a5 protein_coding protein_coding MGP_129S1SvImJ_T0062857.1 MGP_129S1SvImJ_G0027690.1 mouse_genomes_project 3 104317933 104344562 + MGP_129S1SvImJ_P0062857 Ampd1 protein_coding protein_coding MGP_129S1SvImJ_T0062858.1 MGP_129S1SvImJ_G0027690.1 mouse_genomes_project 3 104317941 104344556 + MGP_129S1SvImJ_P0062858 Ampd1 protein_coding protein_coding MGP_129S1SvImJ_T0062859.1 MGP_129S1SvImJ_G0027690.1 mouse_genomes_project 3 104317972 104332091 + MGP_129S1SvImJ_P0062859 Ampd1 protein_coding protein_coding MGP_129S1SvImJ_T0062860.1 MGP_129S1SvImJ_G0027690.1 mouse_genomes_project 3 104337494 104338522 + Ampd1 protein_coding retained_intron MGP_129S1SvImJ_T0062861.1 MGP_129S1SvImJ_G0027690.1 mouse_genomes_project 3 104338165 104344548 + MGP_129S1SvImJ_P0062861 Ampd1 protein_coding protein_coding MGP_129S1SvImJ_T0098928.1 MGP_129S1SvImJ_G0037006.1 mouse_genomes_project 3 157211587 157213730 - 1700012D16Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0062179.1 MGP_129S1SvImJ_G0027540.1 mouse_genomes_project 3 94262673 94297885 + MGP_129S1SvImJ_P0062179 protein_coding protein_coding MGP_129S1SvImJ_T0062085.1 MGP_129S1SvImJ_G0027472.1 mouse_genomes_project 3 90890836 90915210 + S100a3 protein_coding processed_transcript MGP_129S1SvImJ_T0062086.1 MGP_129S1SvImJ_G0027472.1 mouse_genomes_project 3 90914543 90933992 + MGP_129S1SvImJ_P0062086 S100a3 protein_coding protein_coding MGP_129S1SvImJ_T0062087.1 MGP_129S1SvImJ_G0027472.1 mouse_genomes_project 3 90916836 90934038 + MGP_129S1SvImJ_P0062087 S100a3 protein_coding protein_coding MGP_129S1SvImJ_T0062089.1 MGP_129S1SvImJ_G0027472.1 mouse_genomes_project 3 90931728 90934216 + MGP_129S1SvImJ_P0062089 S100a3 protein_coding protein_coding MGP_129S1SvImJ_T0062090.1 MGP_129S1SvImJ_G0027472.1 mouse_genomes_project 3 90931758 90934216 + S100a3 protein_coding retained_intron MGP_129S1SvImJ_T0001423.1 MGP_129S1SvImJ_G0001346.1 mouse_genomes_project 3 164001141 164008903 + TEC TEC MGP_129S1SvImJ_T0063686.1 MGP_129S1SvImJ_G0027864.1 mouse_genomes_project 3 130178865 130289717 - MGP_129S1SvImJ_P0063686 Alpk1 protein_coding protein_coding MGP_129S1SvImJ_T0063687.1 MGP_129S1SvImJ_G0027864.1 mouse_genomes_project 3 130178865 130245774 - MGP_129S1SvImJ_P0063687 Alpk1 protein_coding protein_coding MGP_129S1SvImJ_T0063688.1 MGP_129S1SvImJ_G0027864.1 mouse_genomes_project 3 130178954 130289717 - Alpk1 protein_coding retained_intron MGP_129S1SvImJ_T0063689.1 MGP_129S1SvImJ_G0027864.1 mouse_genomes_project 3 130190076 130196809 - MGP_129S1SvImJ_P0063689 Alpk1 protein_coding protein_coding MGP_129S1SvImJ_T0063690.1 MGP_129S1SvImJ_G0027864.1 mouse_genomes_project 3 130240557 130289703 - Alpk1 protein_coding retained_intron MGP_129S1SvImJ_T0063691.1 MGP_129S1SvImJ_G0027864.1 mouse_genomes_project 3 130269750 130289680 - Alpk1 protein_coding processed_transcript MGP_129S1SvImJ_T0063884.1 MGP_129S1SvImJ_G0027903.1 mouse_genomes_project 3 138149169 138176460 + MGP_129S1SvImJ_P0063884 Bdh2 protein_coding protein_coding MGP_129S1SvImJ_T0063885.1 MGP_129S1SvImJ_G0027903.1 mouse_genomes_project 3 138149209 138176460 + MGP_129S1SvImJ_P0063885 Bdh2 protein_coding protein_coding MGP_129S1SvImJ_T0063886.1 MGP_129S1SvImJ_G0027903.1 mouse_genomes_project 3 138149231 138152363 + Bdh2 protein_coding retained_intron MGP_129S1SvImJ_T0063887.1 MGP_129S1SvImJ_G0027903.1 mouse_genomes_project 3 138156537 138176457 + Bdh2 protein_coding processed_transcript MGP_129S1SvImJ_T0062956.1 MGP_129S1SvImJ_G0027708.1 mouse_genomes_project 3 106090751 106100876 - MGP_129S1SvImJ_P0062956 Fam19a3 protein_coding protein_coding MGP_129S1SvImJ_T0062957.1 MGP_129S1SvImJ_G0027708.1 mouse_genomes_project 3 106100689 106105173 - Fam19a3 protein_coding processed_transcript MGP_129S1SvImJ_T0063752.1 MGP_129S1SvImJ_G0027876.1 mouse_genomes_project 3 132566717 132587317 + MGP_129S1SvImJ_P0063752 Pla2g12a protein_coding protein_coding MGP_129S1SvImJ_T0063753.1 MGP_129S1SvImJ_G0027876.1 mouse_genomes_project 3 132566925 132586421 + MGP_129S1SvImJ_P0063753 Pla2g12a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063754.1 MGP_129S1SvImJ_G0027876.1 mouse_genomes_project 3 132570562 132586439 + MGP_129S1SvImJ_P0063754 Pla2g12a protein_coding protein_coding MGP_129S1SvImJ_T0063755.1 MGP_129S1SvImJ_G0027876.1 mouse_genomes_project 3 132583579 132587313 + Pla2g12a protein_coding retained_intron MGP_129S1SvImJ_T0064084.1 MGP_129S1SvImJ_G0027942.1 mouse_genomes_project 3 145715555 145735183 + MGP_129S1SvImJ_P0064084 Gbp7 protein_coding protein_coding MGP_129S1SvImJ_T0064085.1 MGP_129S1SvImJ_G0027942.1 mouse_genomes_project 3 145715555 145738280 + MGP_129S1SvImJ_P0064085 Gbp7 protein_coding protein_coding MGP_129S1SvImJ_T0060021.1 MGP_129S1SvImJ_G0027053.1 mouse_genomes_project 3 5499120 5503018 - MGP_129S1SvImJ_P0060021 Hey1 protein_coding protein_coding MGP_129S1SvImJ_T0060022.1 MGP_129S1SvImJ_G0027053.1 mouse_genomes_project 3 5500460 5502746 - Hey1 protein_coding retained_intron MGP_129S1SvImJ_T0060023.1 MGP_129S1SvImJ_G0027053.1 mouse_genomes_project 3 5500557 5502387 - Hey1 protein_coding retained_intron MGP_129S1SvImJ_T0060024.1 MGP_129S1SvImJ_G0027053.1 mouse_genomes_project 3 5501303 5502726 - Hey1 protein_coding retained_intron MGP_129S1SvImJ_T0061599.1 MGP_129S1SvImJ_G0027392.1 mouse_genomes_project 3 88519594 88539289 + MGP_129S1SvImJ_P0061599 Paqr6 protein_coding protein_coding MGP_129S1SvImJ_T0061600.1 MGP_129S1SvImJ_G0027392.1 mouse_genomes_project 3 88519655 88522308 + Paqr6 protein_coding processed_transcript MGP_129S1SvImJ_T0061601.1 MGP_129S1SvImJ_G0027392.1 mouse_genomes_project 3 88519657 88520867 + Paqr6 protein_coding retained_intron MGP_129S1SvImJ_T0014094.1 MGP_129S1SvImJ_G0012183.1 mouse_genomes_project 3 62206608 62207473 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063599.1 MGP_129S1SvImJ_G0027852.1 mouse_genomes_project 3 126651908 126655797 + MGP_129S1SvImJ_P0063599 Tram1l1 protein_coding protein_coding MGP_129S1SvImJ_T0099758.1 MGP_129S1SvImJ_G0037825.1 mouse_genomes_project 3 87012370 87012530 + Gm23376 snRNA snRNA MGP_129S1SvImJ_T0062178.1 MGP_129S1SvImJ_G0027539.1 mouse_genomes_project 3 94262673 94356576 + MGP_129S1SvImJ_P0062178 protein_coding protein_coding MGP_129S1SvImJ_T0064059.1 MGP_129S1SvImJ_G0027938.1 mouse_genomes_project 3 144616921 144984695 + MGP_129S1SvImJ_P0064059 Unc5c protein_coding protein_coding MGP_129S1SvImJ_T0064060.1 MGP_129S1SvImJ_G0027938.1 mouse_genomes_project 3 144617279 144979239 + MGP_129S1SvImJ_P0064060 Unc5c protein_coding protein_coding MGP_129S1SvImJ_T0064061.1 MGP_129S1SvImJ_G0027938.1 mouse_genomes_project 3 144617304 144815918 + Unc5c protein_coding processed_transcript MGP_129S1SvImJ_T0064062.1 MGP_129S1SvImJ_G0027938.1 mouse_genomes_project 3 144617304 144622644 + Unc5c protein_coding retained_intron MGP_129S1SvImJ_T0064063.1 MGP_129S1SvImJ_G0027938.1 mouse_genomes_project 3 144617304 144836603 + Unc5c protein_coding retained_intron MGP_129S1SvImJ_T0064064.1 MGP_129S1SvImJ_G0027938.1 mouse_genomes_project 3 144617304 144979191 + MGP_129S1SvImJ_P0064064 Unc5c protein_coding protein_coding MGP_129S1SvImJ_T0064065.1 MGP_129S1SvImJ_G0027938.1 mouse_genomes_project 3 144617376 144980308 + MGP_129S1SvImJ_P0064065 Unc5c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064066.1 MGP_129S1SvImJ_G0027938.1 mouse_genomes_project 3 144939728 144941882 + Unc5c protein_coding retained_intron MGP_129S1SvImJ_T0001302.1 MGP_129S1SvImJ_G0001226.1 mouse_genomes_project 3 109391081 109391767 + TEC TEC MGP_129S1SvImJ_T0098908.1 MGP_129S1SvImJ_G0036986.1 mouse_genomes_project 3 105485200 105488284 - Gm43256 sense_intronic sense_intronic MGP_129S1SvImJ_T0060245.1 MGP_129S1SvImJ_G0027110.1 mouse_genomes_project 3 24634797 24659557 + MGP_129S1SvImJ_P0060245 Tnfsf10 protein_coding protein_coding MGP_129S1SvImJ_T0060246.1 MGP_129S1SvImJ_G0027110.1 mouse_genomes_project 3 24634830 24662172 + MGP_129S1SvImJ_P0060246 Tnfsf10 protein_coding protein_coding MGP_129S1SvImJ_T0061821.1 MGP_129S1SvImJ_G0027425.1 mouse_genomes_project 3 89437567 89451486 - MGP_129S1SvImJ_P0061821 Trim46 protein_coding protein_coding MGP_129S1SvImJ_T0061822.1 MGP_129S1SvImJ_G0027425.1 mouse_genomes_project 3 89438225 89444963 - Trim46 protein_coding processed_transcript MGP_129S1SvImJ_T0061823.1 MGP_129S1SvImJ_G0027425.1 mouse_genomes_project 3 89438258 89451461 - MGP_129S1SvImJ_P0061823 Trim46 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061824.1 MGP_129S1SvImJ_G0027425.1 mouse_genomes_project 3 89438289 89451384 - MGP_129S1SvImJ_P0061824 Trim46 protein_coding protein_coding MGP_129S1SvImJ_T0061825.1 MGP_129S1SvImJ_G0027425.1 mouse_genomes_project 3 89449908 89451898 - MGP_129S1SvImJ_P0061825 Trim46 protein_coding protein_coding MGP_129S1SvImJ_T0062144.1 MGP_129S1SvImJ_G0027515.1 mouse_genomes_project 3 93224920 93227814 - MGP_129S1SvImJ_P0062144 Lce1h protein_coding protein_coding MGP_129S1SvImJ_T0014139.1 MGP_129S1SvImJ_G0012228.1 mouse_genomes_project 3 75549137 75549928 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001181.1 MGP_129S1SvImJ_G0001107.1 mouse_genomes_project 3 36302377 36303558 - TEC TEC MGP_129S1SvImJ_T0001220.1 MGP_129S1SvImJ_G0001145.1 mouse_genomes_project 3 50407528 50409353 - TEC TEC MGP_129S1SvImJ_T0001221.1 MGP_129S1SvImJ_G0001145.1 mouse_genomes_project 3 50407529 50409353 - TEC pseudogene MGP_129S1SvImJ_T0060261.1 MGP_129S1SvImJ_G0027115.1 mouse_genomes_project 3 25642277 26062033 + MGP_129S1SvImJ_P0060261 Tnik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060262.1 MGP_129S1SvImJ_G0027115.1 mouse_genomes_project 3 25642278 26067306 + MGP_129S1SvImJ_P0060262 Tnik protein_coding protein_coding MGP_129S1SvImJ_T0060263.1 MGP_129S1SvImJ_G0027115.1 mouse_genomes_project 3 25642339 25741285 + Tnik protein_coding retained_intron MGP_129S1SvImJ_T0060264.1 MGP_129S1SvImJ_G0027115.1 mouse_genomes_project 3 25642339 25888966 + Tnik protein_coding retained_intron MGP_129S1SvImJ_T0060265.1 MGP_129S1SvImJ_G0027115.1 mouse_genomes_project 3 25642626 26057897 + Tnik protein_coding retained_intron MGP_129S1SvImJ_T0060266.1 MGP_129S1SvImJ_G0027115.1 mouse_genomes_project 3 25642626 26059671 + MGP_129S1SvImJ_P0060266 Tnik protein_coding protein_coding MGP_129S1SvImJ_T0060267.1 MGP_129S1SvImJ_G0027115.1 mouse_genomes_project 3 25642626 26059671 + MGP_129S1SvImJ_P0060267 Tnik protein_coding protein_coding MGP_129S1SvImJ_T0060268.1 MGP_129S1SvImJ_G0027115.1 mouse_genomes_project 3 25642645 25643918 + Tnik protein_coding retained_intron MGP_129S1SvImJ_T0060269.1 MGP_129S1SvImJ_G0027115.1 mouse_genomes_project 3 25642706 26059430 + MGP_129S1SvImJ_P0060269 Tnik protein_coding protein_coding MGP_129S1SvImJ_T0060270.1 MGP_129S1SvImJ_G0027115.1 mouse_genomes_project 3 25642706 26059430 + MGP_129S1SvImJ_P0060270 Tnik protein_coding protein_coding MGP_129S1SvImJ_T0060271.1 MGP_129S1SvImJ_G0027115.1 mouse_genomes_project 3 25642706 26059430 + MGP_129S1SvImJ_P0060271 Tnik protein_coding protein_coding MGP_129S1SvImJ_T0060272.1 MGP_129S1SvImJ_G0027115.1 mouse_genomes_project 3 25642706 26059430 + MGP_129S1SvImJ_P0060272 Tnik protein_coding protein_coding MGP_129S1SvImJ_T0060273.1 MGP_129S1SvImJ_G0027115.1 mouse_genomes_project 3 25642706 26059430 + MGP_129S1SvImJ_P0060273 Tnik protein_coding protein_coding MGP_129S1SvImJ_T0060274.1 MGP_129S1SvImJ_G0027115.1 mouse_genomes_project 3 25795283 25985842 + Tnik protein_coding processed_transcript MGP_129S1SvImJ_T0060275.1 MGP_129S1SvImJ_G0027115.1 mouse_genomes_project 3 25925019 25926834 + Tnik protein_coding retained_intron MGP_129S1SvImJ_T0060276.1 MGP_129S1SvImJ_G0027115.1 mouse_genomes_project 3 26020216 26028802 + Tnik protein_coding retained_intron MGP_129S1SvImJ_T0060277.1 MGP_129S1SvImJ_G0027115.1 mouse_genomes_project 3 26041717 26057393 + Tnik protein_coding retained_intron MGP_129S1SvImJ_T0060278.1 MGP_129S1SvImJ_G0027115.1 mouse_genomes_project 3 26058293 26060197 + Tnik protein_coding retained_intron MGP_129S1SvImJ_T0010534.1 MGP_129S1SvImJ_G0008650.1 mouse_genomes_project 3 80451881 80451992 - Gm25749 miRNA miRNA MGP_129S1SvImJ_T0007573.1 MGP_129S1SvImJ_G0006201.1 mouse_genomes_project 3 66704160 66706257 - Gm35299 lincRNA lincRNA MGP_129S1SvImJ_T0061188.1 MGP_129S1SvImJ_G0027297.1 mouse_genomes_project 3 68988872 68991349 + Nmd3 protein_coding retained_intron MGP_129S1SvImJ_T0061189.1 MGP_129S1SvImJ_G0027297.1 mouse_genomes_project 3 68988872 69026120 + MGP_129S1SvImJ_P0061189 Nmd3 protein_coding protein_coding MGP_129S1SvImJ_T0061190.1 MGP_129S1SvImJ_G0027297.1 mouse_genomes_project 3 68988919 69001951 + MGP_129S1SvImJ_P0061190 Nmd3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061191.1 MGP_129S1SvImJ_G0027297.1 mouse_genomes_project 3 68988970 68997421 + MGP_129S1SvImJ_P0061191 Nmd3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061192.1 MGP_129S1SvImJ_G0027297.1 mouse_genomes_project 3 68988977 68998862 + Nmd3 protein_coding retained_intron MGP_129S1SvImJ_T0061193.1 MGP_129S1SvImJ_G0027297.1 mouse_genomes_project 3 68989142 68993297 + MGP_129S1SvImJ_P0061193 Nmd3 protein_coding protein_coding MGP_129S1SvImJ_T0061194.1 MGP_129S1SvImJ_G0027297.1 mouse_genomes_project 3 68991123 69008632 + Nmd3 protein_coding retained_intron MGP_129S1SvImJ_T0061195.1 MGP_129S1SvImJ_G0027297.1 mouse_genomes_project 3 69016176 69018789 + Nmd3 protein_coding retained_intron MGP_129S1SvImJ_T0063202.1 MGP_129S1SvImJ_G0027774.1 mouse_genomes_project 3 109909963 109926826 + MGP_129S1SvImJ_P0063202 Mybphl protein_coding protein_coding MGP_129S1SvImJ_T0098905.1 MGP_129S1SvImJ_G0036983.1 mouse_genomes_project 3 105445701 105447617 - Gm43258 sense_intronic sense_intronic MGP_129S1SvImJ_T0062101.1 MGP_129S1SvImJ_G0027479.1 mouse_genomes_project 3 91009238 91010306 + MGP_129S1SvImJ_P0062101 S100a8 protein_coding protein_coding MGP_129S1SvImJ_T0062102.1 MGP_129S1SvImJ_G0027479.1 mouse_genomes_project 3 91009573 91010235 + S100a8 protein_coding retained_intron MGP_129S1SvImJ_T0060776.1 MGP_129S1SvImJ_G0027201.1 mouse_genomes_project 3 50169489 50289109 - MGP_129S1SvImJ_P0060776 Maml3 protein_coding protein_coding MGP_129S1SvImJ_T0060777.1 MGP_129S1SvImJ_G0027201.1 mouse_genomes_project 3 50169489 50611784 - MGP_129S1SvImJ_P0060777 Maml3 protein_coding protein_coding MGP_129S1SvImJ_T0060778.1 MGP_129S1SvImJ_G0027201.1 mouse_genomes_project 3 50286953 50289147 - Maml3 protein_coding retained_intron MGP_129S1SvImJ_T0063240.1 MGP_129S1SvImJ_G0027782.1 mouse_genomes_project 3 110156492 110216603 + MGP_129S1SvImJ_P0063240 Wdr47 protein_coding protein_coding MGP_129S1SvImJ_T0063241.1 MGP_129S1SvImJ_G0027782.1 mouse_genomes_project 3 110156565 110186676 + MGP_129S1SvImJ_P0063241 Wdr47 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063242.1 MGP_129S1SvImJ_G0027782.1 mouse_genomes_project 3 110156602 110181995 + Wdr47 protein_coding retained_intron MGP_129S1SvImJ_T0063243.1 MGP_129S1SvImJ_G0027782.1 mouse_genomes_project 3 110186872 110192675 + Wdr47 protein_coding processed_transcript MGP_129S1SvImJ_T0063244.1 MGP_129S1SvImJ_G0027782.1 mouse_genomes_project 3 110187253 110197299 + Wdr47 protein_coding retained_intron MGP_129S1SvImJ_T0063245.1 MGP_129S1SvImJ_G0027782.1 mouse_genomes_project 3 110191368 110202890 + Wdr47 protein_coding processed_transcript MGP_129S1SvImJ_T0063246.1 MGP_129S1SvImJ_G0027782.1 mouse_genomes_project 3 110196947 110207577 + Wdr47 protein_coding retained_intron MGP_129S1SvImJ_T0101062.1 MGP_129S1SvImJ_G0039129.1 mouse_genomes_project 3 118366055 118366152 + Gm26358 snoRNA snoRNA MGP_129S1SvImJ_T0061269.1 MGP_129S1SvImJ_G0027315.1 mouse_genomes_project 3 79338900 79342641 + MGP_129S1SvImJ_P0061269 4930579G24Rik protein_coding protein_coding MGP_129S1SvImJ_T0062532.1 MGP_129S1SvImJ_G0027604.1 mouse_genomes_project 3 96914990 96972023 + MGP_129S1SvImJ_P0062532 Otud7b protein_coding protein_coding MGP_129S1SvImJ_T0062533.1 MGP_129S1SvImJ_G0027604.1 mouse_genomes_project 3 96914990 96972023 + MGP_129S1SvImJ_P0062533 Otud7b protein_coding protein_coding MGP_129S1SvImJ_T0062534.1 MGP_129S1SvImJ_G0027604.1 mouse_genomes_project 3 96914990 96952419 + MGP_129S1SvImJ_P0062534 Otud7b protein_coding protein_coding MGP_129S1SvImJ_T0062535.1 MGP_129S1SvImJ_G0027604.1 mouse_genomes_project 3 96914990 96955227 + MGP_129S1SvImJ_P0062535 Otud7b protein_coding protein_coding MGP_129S1SvImJ_T0062536.1 MGP_129S1SvImJ_G0027604.1 mouse_genomes_project 3 96915009 96941949 + Otud7b protein_coding processed_transcript MGP_129S1SvImJ_T0062537.1 MGP_129S1SvImJ_G0027604.1 mouse_genomes_project 3 96915011 96952454 + Otud7b protein_coding processed_transcript MGP_129S1SvImJ_T0062538.1 MGP_129S1SvImJ_G0027604.1 mouse_genomes_project 3 96917541 96972023 + MGP_129S1SvImJ_P0062538 Otud7b protein_coding protein_coding MGP_129S1SvImJ_T0062539.1 MGP_129S1SvImJ_G0027604.1 mouse_genomes_project 3 96961593 96963453 + Otud7b protein_coding processed_transcript MGP_129S1SvImJ_T0001354.1 MGP_129S1SvImJ_G0001278.1 mouse_genomes_project 3 129864703 129867916 - TEC TEC MGP_129S1SvImJ_T0014194.1 MGP_129S1SvImJ_G0012283.1 mouse_genomes_project 3 93923121 93923673 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007607.1 MGP_129S1SvImJ_G0006230.1 mouse_genomes_project 3 86176968 86179741 + Gm37933 lincRNA lincRNA MGP_129S1SvImJ_T0060517.1 MGP_129S1SvImJ_G0027158.1 mouse_genomes_project 3 34243026 34272508 - MGP_129S1SvImJ_P0060517 Anxa5 protein_coding protein_coding MGP_129S1SvImJ_T0060518.1 MGP_129S1SvImJ_G0027158.1 mouse_genomes_project 3 34243267 34246424 - Anxa5 protein_coding retained_intron MGP_129S1SvImJ_T0060519.1 MGP_129S1SvImJ_G0027158.1 mouse_genomes_project 3 34246300 34272273 - MGP_129S1SvImJ_P0060519 Anxa5 protein_coding protein_coding MGP_129S1SvImJ_T0099742.1 MGP_129S1SvImJ_G0037809.1 mouse_genomes_project 3 62808570 62808668 + Gm23500 snRNA snRNA MGP_129S1SvImJ_T0101069.1 MGP_129S1SvImJ_G0039136.1 mouse_genomes_project 3 133630548 133630676 - Gm26090 snoRNA snoRNA MGP_129S1SvImJ_T0062145.1 MGP_129S1SvImJ_G0027516.1 mouse_genomes_project 3 93239298 93240988 - MGP_129S1SvImJ_P0062145 Lce1i protein_coding protein_coding MGP_129S1SvImJ_T0060205.1 MGP_129S1SvImJ_G0027104.1 mouse_genomes_project 3 19340841 19487469 + MGP_129S1SvImJ_P0060205 Tbl1xr1 protein_coding protein_coding MGP_129S1SvImJ_T0060206.1 MGP_129S1SvImJ_G0027104.1 mouse_genomes_project 3 19340916 19483626 + MGP_129S1SvImJ_P0060206 Tbl1xr1 protein_coding protein_coding MGP_129S1SvImJ_T0060207.1 MGP_129S1SvImJ_G0027104.1 mouse_genomes_project 3 19340945 19458170 + Tbl1xr1 protein_coding processed_transcript MGP_129S1SvImJ_T0060208.1 MGP_129S1SvImJ_G0027104.1 mouse_genomes_project 3 19341021 19460609 + MGP_129S1SvImJ_P0060208 Tbl1xr1 protein_coding protein_coding MGP_129S1SvImJ_T0060209.1 MGP_129S1SvImJ_G0027104.1 mouse_genomes_project 3 19341070 19459512 + Tbl1xr1 protein_coding processed_transcript MGP_129S1SvImJ_T0060210.1 MGP_129S1SvImJ_G0027104.1 mouse_genomes_project 3 19341125 19458138 + MGP_129S1SvImJ_P0060210 Tbl1xr1 protein_coding protein_coding MGP_129S1SvImJ_T0060211.1 MGP_129S1SvImJ_G0027104.1 mouse_genomes_project 3 19341473 19486168 + MGP_129S1SvImJ_P0060211 Tbl1xr1 protein_coding protein_coding MGP_129S1SvImJ_T0060212.1 MGP_129S1SvImJ_G0027104.1 mouse_genomes_project 3 19381706 19482843 + MGP_129S1SvImJ_P0060212 Tbl1xr1 protein_coding protein_coding MGP_129S1SvImJ_T0060213.1 MGP_129S1SvImJ_G0027104.1 mouse_genomes_project 3 19406469 19459505 + MGP_129S1SvImJ_P0060213 Tbl1xr1 protein_coding protein_coding MGP_129S1SvImJ_T0060214.1 MGP_129S1SvImJ_G0027104.1 mouse_genomes_project 3 19416137 19483950 + MGP_129S1SvImJ_P0060214 Tbl1xr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060215.1 MGP_129S1SvImJ_G0027104.1 mouse_genomes_project 3 19474257 19481454 + MGP_129S1SvImJ_P0060215 Tbl1xr1 protein_coding protein_coding MGP_129S1SvImJ_T0001265.1 MGP_129S1SvImJ_G0001189.1 mouse_genomes_project 3 75441957 75444134 + TEC TEC MGP_129S1SvImJ_T0014175.1 MGP_129S1SvImJ_G0012264.1 mouse_genomes_project 3 89301423 89301676 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099044.1 MGP_129S1SvImJ_G0037112.1 mouse_genomes_project 3 92523359 92566275 - 4930511M18Rik sense_overlapping sense_overlapping MGP_129S1SvImJ_T0060252.1 MGP_129S1SvImJ_G0027113.1 mouse_genomes_project 3 25226981 25258239 - MGP_129S1SvImJ_P0060252 Tmem212 protein_coding protein_coding MGP_129S1SvImJ_T0007657.1 MGP_129S1SvImJ_G0006266.1 mouse_genomes_project 3 105649384 105665350 - Gm5546 lincRNA lincRNA MGP_129S1SvImJ_T0063364.1 MGP_129S1SvImJ_G0027807.1 mouse_genomes_project 3 117989100 118009678 - MGP_129S1SvImJ_P0063364 Vcam1 protein_coding protein_coding MGP_129S1SvImJ_T0063365.1 MGP_129S1SvImJ_G0027807.1 mouse_genomes_project 3 117996692 118000770 - Vcam1 protein_coding retained_intron MGP_129S1SvImJ_T0063366.1 MGP_129S1SvImJ_G0027807.1 mouse_genomes_project 3 118002323 118009447 - MGP_129S1SvImJ_P0063366 Vcam1 protein_coding protein_coding MGP_129S1SvImJ_T0063367.1 MGP_129S1SvImJ_G0027807.1 mouse_genomes_project 3 118004661 118008926 - MGP_129S1SvImJ_P0063367 Vcam1 protein_coding protein_coding MGP_129S1SvImJ_T0013929.1 MGP_129S1SvImJ_G0012018.1 mouse_genomes_project 3 6574316 6575199 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001222.1 MGP_129S1SvImJ_G0001146.1 mouse_genomes_project 3 50487506 50489723 - TEC TEC MGP_129S1SvImJ_T0007601.1 MGP_129S1SvImJ_G0006224.1 mouse_genomes_project 3 82957397 82961366 - Gm10710 lincRNA lincRNA MGP_129S1SvImJ_T0007587.1 MGP_129S1SvImJ_G0006213.1 mouse_genomes_project 3 75445936 75498896 + Gm37256 lincRNA lincRNA MGP_129S1SvImJ_T0004241.1 MGP_129S1SvImJ_G0003735.1 mouse_genomes_project 3 33976618 33978930 + Gm43255 antisense antisense MGP_129S1SvImJ_T0014355.1 MGP_129S1SvImJ_G0012444.1 mouse_genomes_project 3 141709084 141709273 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014140.1 MGP_129S1SvImJ_G0012229.1 mouse_genomes_project 3 76421867 76422206 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004324.1 MGP_129S1SvImJ_G0003796.1 mouse_genomes_project 3 97733845 97736116 - 4930442L01Rik antisense antisense MGP_129S1SvImJ_T0001247.1 MGP_129S1SvImJ_G0001171.1 mouse_genomes_project 3 58150469 58152000 + TEC TEC MGP_129S1SvImJ_T0017995.1 MGP_129S1SvImJ_G0015507.1 mouse_genomes_project 3 82467065 82469946 - Gm29999 processed_transcript retained_intron MGP_129S1SvImJ_T0017996.1 MGP_129S1SvImJ_G0015507.1 mouse_genomes_project 3 82467211 82471965 - Gm29999 processed_transcript lincRNA MGP_129S1SvImJ_T0013908.1 MGP_129S1SvImJ_G0011997.1 mouse_genomes_project 3 580292 581066 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060110.1 MGP_129S1SvImJ_G0027081.1 mouse_genomes_project 3 12527195 13050306 - MGP_129S1SvImJ_P0060110 protein_coding protein_coding MGP_129S1SvImJ_T0060115.1 MGP_129S1SvImJ_G0027081.1 mouse_genomes_project 3 12667588 12760037 - MGP_129S1SvImJ_P0060115 protein_coding protein_coding MGP_129S1SvImJ_T0060116.1 MGP_129S1SvImJ_G0027081.1 mouse_genomes_project 3 12716197 12760043 - MGP_129S1SvImJ_P0060116 protein_coding protein_coding MGP_129S1SvImJ_T0060120.1 MGP_129S1SvImJ_G0027081.1 mouse_genomes_project 3 13029770 13050265 - protein_coding retained_intron MGP_129S1SvImJ_T0064236.1 MGP_129S1SvImJ_G0027975.1 mouse_genomes_project 3 150096972 150153762 + MGP_129S1SvImJ_P0064236 Uox protein_coding protein_coding MGP_129S1SvImJ_T0064239.1 MGP_129S1SvImJ_G0027975.1 mouse_genomes_project 3 150124521 150160145 + MGP_129S1SvImJ_P0064239 Uox protein_coding protein_coding MGP_129S1SvImJ_T0064240.1 MGP_129S1SvImJ_G0027975.1 mouse_genomes_project 3 150124592 150139779 + MGP_129S1SvImJ_P0064240 Uox protein_coding protein_coding MGP_129S1SvImJ_T0064241.1 MGP_129S1SvImJ_G0027975.1 mouse_genomes_project 3 150124609 150158485 + MGP_129S1SvImJ_P0064241 Uox protein_coding protein_coding MGP_129S1SvImJ_T0064242.1 MGP_129S1SvImJ_G0027975.1 mouse_genomes_project 3 150124610 150139897 + Uox protein_coding retained_intron MGP_129S1SvImJ_T0064243.1 MGP_129S1SvImJ_G0027975.1 mouse_genomes_project 3 150137438 150139802 + Uox protein_coding retained_intron MGP_129S1SvImJ_T0064438.1 MGP_129S1SvImJ_G0028002.1 mouse_genomes_project 3 158319678 158345226 - MGP_129S1SvImJ_P0064438 Lhx8 protein_coding protein_coding MGP_129S1SvImJ_T0064439.1 MGP_129S1SvImJ_G0028002.1 mouse_genomes_project 3 158319680 158344626 - MGP_129S1SvImJ_P0064439 Lhx8 protein_coding protein_coding MGP_129S1SvImJ_T0064440.1 MGP_129S1SvImJ_G0028002.1 mouse_genomes_project 3 158320362 158342733 - MGP_129S1SvImJ_P0064440 Lhx8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064441.1 MGP_129S1SvImJ_G0028002.1 mouse_genomes_project 3 158331282 158339426 - Lhx8 protein_coding retained_intron MGP_129S1SvImJ_T0064442.1 MGP_129S1SvImJ_G0028002.1 mouse_genomes_project 3 158336799 158343201 - MGP_129S1SvImJ_P0064442 Lhx8 protein_coding protein_coding MGP_129S1SvImJ_T0014207.1 MGP_129S1SvImJ_G0012296.1 mouse_genomes_project 3 96753790 96754150 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004423.1 MGP_129S1SvImJ_G0003861.1 mouse_genomes_project 3 156834974 156835604 + Gm16231 antisense antisense MGP_129S1SvImJ_T0062441.1 MGP_129S1SvImJ_G0027589.1 mouse_genomes_project 3 96384713 96385711 + Ensa protein_coding TEC MGP_129S1SvImJ_T0062442.1 MGP_129S1SvImJ_G0027589.1 mouse_genomes_project 3 96384731 96391823 + MGP_129S1SvImJ_P0062442 Ensa protein_coding protein_coding MGP_129S1SvImJ_T0062443.1 MGP_129S1SvImJ_G0027589.1 mouse_genomes_project 3 96384740 96391823 + MGP_129S1SvImJ_P0062443 Ensa protein_coding protein_coding MGP_129S1SvImJ_T0062444.1 MGP_129S1SvImJ_G0027589.1 mouse_genomes_project 3 96384746 96387255 + Ensa protein_coding retained_intron MGP_129S1SvImJ_T0013934.1 MGP_129S1SvImJ_G0012023.1 mouse_genomes_project 3 7324097 7333359 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014351.1 MGP_129S1SvImJ_G0012440.1 mouse_genomes_project 3 141546641 141546867 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101045.1 MGP_129S1SvImJ_G0039112.1 mouse_genomes_project 3 89229076 89229206 - Gm24403 snoRNA snoRNA MGP_129S1SvImJ_T0001313.1 MGP_129S1SvImJ_G0001237.1 mouse_genomes_project 3 118891119 118895093 - TEC TEC MGP_129S1SvImJ_T0098909.1 MGP_129S1SvImJ_G0036987.1 mouse_genomes_project 3 105779474 105785529 - Gm43696 sense_intronic sense_intronic MGP_129S1SvImJ_T0014229.1 MGP_129S1SvImJ_G0012318.1 mouse_genomes_project 3 102427769 102428329 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101904.1 MGP_129S1SvImJ_G0039817.1 mouse_genomes_project 3 57648468 57652081 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101905.1 MGP_129S1SvImJ_G0039817.1 mouse_genomes_project 3 57650203 57673175 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0014319.1 MGP_129S1SvImJ_G0012408.1 mouse_genomes_project 3 132089466 132090508 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099043.1 MGP_129S1SvImJ_G0037111.1 mouse_genomes_project 3 64054460 64330248 + sense_overlapping sense_overlapping MGP_129S1SvImJ_T0063736.1 MGP_129S1SvImJ_G0027873.1 mouse_genomes_project 3 132485431 132505220 - MGP_129S1SvImJ_P0063736 Rrh protein_coding protein_coding MGP_129S1SvImJ_T0063737.1 MGP_129S1SvImJ_G0027873.1 mouse_genomes_project 3 132485432 132505220 - Rrh protein_coding processed_transcript MGP_129S1SvImJ_T0063738.1 MGP_129S1SvImJ_G0027873.1 mouse_genomes_project 3 132489623 132505232 - MGP_129S1SvImJ_P0063738 Rrh protein_coding protein_coding MGP_129S1SvImJ_T0063739.1 MGP_129S1SvImJ_G0027873.1 mouse_genomes_project 3 132489626 132505218 - MGP_129S1SvImJ_P0063739 Rrh protein_coding protein_coding MGP_129S1SvImJ_T0063740.1 MGP_129S1SvImJ_G0027873.1 mouse_genomes_project 3 132489852 132505314 - MGP_129S1SvImJ_P0063740 Rrh protein_coding protein_coding MGP_129S1SvImJ_T0063741.1 MGP_129S1SvImJ_G0027873.1 mouse_genomes_project 3 132489960 132505189 - MGP_129S1SvImJ_P0063741 Rrh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063742.1 MGP_129S1SvImJ_G0027873.1 mouse_genomes_project 3 132497118 132505221 - Rrh protein_coding processed_transcript MGP_129S1SvImJ_T0063743.1 MGP_129S1SvImJ_G0027873.1 mouse_genomes_project 3 132502230 132505185 - Rrh protein_coding retained_intron MGP_129S1SvImJ_T0013943.1 MGP_129S1SvImJ_G0012032.1 mouse_genomes_project 3 10482152 10482553 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007491.1 MGP_129S1SvImJ_G0006141.1 mouse_genomes_project 3 24462460 24465457 + 1700125G22Rik lincRNA lincRNA MGP_129S1SvImJ_T0063465.1 MGP_129S1SvImJ_G0027827.1 mouse_genomes_project 3 123327053 123343130 - MGP_129S1SvImJ_P0063465 Rwdd3 protein_coding protein_coding MGP_129S1SvImJ_T0063466.1 MGP_129S1SvImJ_G0027827.1 mouse_genomes_project 3 123327055 123328476 - Rwdd3 protein_coding retained_intron MGP_129S1SvImJ_T0063467.1 MGP_129S1SvImJ_G0027827.1 mouse_genomes_project 3 123327498 123330466 - MGP_129S1SvImJ_P0063467 Rwdd3 protein_coding protein_coding MGP_129S1SvImJ_T0063468.1 MGP_129S1SvImJ_G0027827.1 mouse_genomes_project 3 123327501 123343123 - MGP_129S1SvImJ_P0063468 Rwdd3 protein_coding protein_coding MGP_129S1SvImJ_T0063469.1 MGP_129S1SvImJ_G0027827.1 mouse_genomes_project 3 123327520 123343129 - MGP_129S1SvImJ_P0063469 Rwdd3 protein_coding protein_coding MGP_129S1SvImJ_T0063470.1 MGP_129S1SvImJ_G0027827.1 mouse_genomes_project 3 123327594 123343129 - MGP_129S1SvImJ_P0063470 Rwdd3 protein_coding protein_coding MGP_129S1SvImJ_T0063471.1 MGP_129S1SvImJ_G0027827.1 mouse_genomes_project 3 123327933 123343130 - MGP_129S1SvImJ_P0063471 Rwdd3 protein_coding protein_coding MGP_129S1SvImJ_T0063472.1 MGP_129S1SvImJ_G0027827.1 mouse_genomes_project 3 123329654 123343130 - Rwdd3 protein_coding retained_intron MGP_129S1SvImJ_T0063473.1 MGP_129S1SvImJ_G0027827.1 mouse_genomes_project 3 123340604 123343129 - Rwdd3 protein_coding retained_intron MGP_129S1SvImJ_T0061390.1 MGP_129S1SvImJ_G0027345.1 mouse_genomes_project 3 84516408 84519867 + MGP_129S1SvImJ_P0061390 Tigd4 protein_coding protein_coding MGP_129S1SvImJ_T0014005.1 MGP_129S1SvImJ_G0012094.1 mouse_genomes_project 3 34208563 34209110 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063618.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129021007 129112601 + Camk2d protein_coding processed_transcript MGP_129S1SvImJ_T0063619.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129021656 129274721 + MGP_129S1SvImJ_P0063619 Camk2d protein_coding protein_coding MGP_129S1SvImJ_T0063620.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129021665 129274719 + MGP_129S1SvImJ_P0063620 Camk2d protein_coding protein_coding MGP_129S1SvImJ_T0063621.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129021703 129274723 + MGP_129S1SvImJ_P0063621 Camk2d protein_coding protein_coding MGP_129S1SvImJ_T0063622.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129021710 129247698 + MGP_129S1SvImJ_P0063622 Camk2d protein_coding protein_coding MGP_129S1SvImJ_T0063623.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129021712 129276134 + MGP_129S1SvImJ_P0063623 Camk2d protein_coding protein_coding MGP_129S1SvImJ_T0063624.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129021714 129198487 + Camk2d protein_coding retained_intron MGP_129S1SvImJ_T0063625.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129021715 129270270 + Camk2d protein_coding retained_intron MGP_129S1SvImJ_T0063626.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129021715 129241068 + MGP_129S1SvImJ_P0063626 Camk2d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063627.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129021725 129272523 + MGP_129S1SvImJ_P0063627 Camk2d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063628.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129021740 129273638 + Camk2d protein_coding processed_transcript MGP_129S1SvImJ_T0063629.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129021802 129273511 + MGP_129S1SvImJ_P0063629 Camk2d protein_coding protein_coding MGP_129S1SvImJ_T0063630.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129021911 129276103 + MGP_129S1SvImJ_P0063630 Camk2d protein_coding protein_coding MGP_129S1SvImJ_T0063631.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129022013 129273030 + MGP_129S1SvImJ_P0063631 Camk2d protein_coding protein_coding MGP_129S1SvImJ_T0063632.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129022046 129113298 + Camk2d protein_coding retained_intron MGP_129S1SvImJ_T0063633.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129022104 129273492 + Camk2d protein_coding retained_intron MGP_129S1SvImJ_T0063634.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129022119 129274135 + MGP_129S1SvImJ_P0063634 Camk2d protein_coding protein_coding MGP_129S1SvImJ_T0063635.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129207530 129214117 + Camk2d protein_coding retained_intron MGP_129S1SvImJ_T0063636.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129208106 129239840 + Camk2d protein_coding processed_transcript MGP_129S1SvImJ_T0063637.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129213365 129237672 + Camk2d protein_coding retained_intron MGP_129S1SvImJ_T0063638.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129224555 129270069 + Camk2d protein_coding retained_intron MGP_129S1SvImJ_T0063639.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129227426 129273821 + Camk2d protein_coding retained_intron MGP_129S1SvImJ_T0063640.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129230915 129271360 + Camk2d protein_coding retained_intron MGP_129S1SvImJ_T0063641.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129230915 129271360 + Camk2d protein_coding retained_intron MGP_129S1SvImJ_T0063642.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129232122 129272987 + MGP_129S1SvImJ_P0063642 Camk2d protein_coding protein_coding MGP_129S1SvImJ_T0063643.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129233707 129236081 + Camk2d protein_coding retained_intron MGP_129S1SvImJ_T0063644.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129235043 129272706 + MGP_129S1SvImJ_P0063644 Camk2d protein_coding protein_coding MGP_129S1SvImJ_T0063645.1 MGP_129S1SvImJ_G0027858.1 mouse_genomes_project 3 129236348 129239441 + Camk2d protein_coding retained_intron MGP_129S1SvImJ_T0061348.1 MGP_129S1SvImJ_G0027337.1 mouse_genomes_project 3 83704325 83709822 - MGP_129S1SvImJ_P0061348 Tlr2 protein_coding protein_coding MGP_129S1SvImJ_T0063271.1 MGP_129S1SvImJ_G0027787.1 mouse_genomes_project 3 110434756 110471366 - MGP_129S1SvImJ_P0063271 Fndc7 protein_coding protein_coding MGP_129S1SvImJ_T0063272.1 MGP_129S1SvImJ_G0027787.1 mouse_genomes_project 3 110434761 110439692 - Fndc7 protein_coding processed_transcript MGP_129S1SvImJ_T0063273.1 MGP_129S1SvImJ_G0027787.1 mouse_genomes_project 3 110436401 110471668 - MGP_129S1SvImJ_P0063273 Fndc7 protein_coding protein_coding MGP_129S1SvImJ_T0063274.1 MGP_129S1SvImJ_G0027787.1 mouse_genomes_project 3 110436418 110471475 - MGP_129S1SvImJ_P0063274 Fndc7 protein_coding protein_coding MGP_129S1SvImJ_T0063275.1 MGP_129S1SvImJ_G0027787.1 mouse_genomes_project 3 110437166 110439688 - Fndc7 protein_coding processed_transcript MGP_129S1SvImJ_T0063276.1 MGP_129S1SvImJ_G0027787.1 mouse_genomes_project 3 110444986 110452798 - Fndc7 protein_coding processed_transcript MGP_129S1SvImJ_T0063277.1 MGP_129S1SvImJ_G0027787.1 mouse_genomes_project 3 110451539 110463915 - Fndc7 protein_coding retained_intron MGP_129S1SvImJ_T0061152.1 MGP_129S1SvImJ_G0027290.1 mouse_genomes_project 3 68113579 68225596 - Ift80 protein_coding retained_intron MGP_129S1SvImJ_T0061153.1 MGP_129S1SvImJ_G0027290.1 mouse_genomes_project 3 68113579 68225580 - MGP_129S1SvImJ_P0061153 Ift80 protein_coding protein_coding MGP_129S1SvImJ_T0061154.1 MGP_129S1SvImJ_G0027290.1 mouse_genomes_project 3 68113605 68225607 - MGP_129S1SvImJ_P0061154 Ift80 protein_coding protein_coding MGP_129S1SvImJ_T0061155.1 MGP_129S1SvImJ_G0027290.1 mouse_genomes_project 3 68113605 68215661 - MGP_129S1SvImJ_P0061155 Ift80 protein_coding protein_coding MGP_129S1SvImJ_T0061156.1 MGP_129S1SvImJ_G0027290.1 mouse_genomes_project 3 68114725 68137359 - Ift80 protein_coding retained_intron MGP_129S1SvImJ_T0061157.1 MGP_129S1SvImJ_G0027290.1 mouse_genomes_project 3 68132046 68132396 - Ift80 protein_coding retained_intron MGP_129S1SvImJ_T0061158.1 MGP_129S1SvImJ_G0027290.1 mouse_genomes_project 3 68134725 68225535 - Ift80 protein_coding retained_intron MGP_129S1SvImJ_T0061159.1 MGP_129S1SvImJ_G0027290.1 mouse_genomes_project 3 68160209 68193936 - Ift80 protein_coding processed_transcript MGP_129S1SvImJ_T0061160.1 MGP_129S1SvImJ_G0027290.1 mouse_genomes_project 3 68183813 68225514 - MGP_129S1SvImJ_P0061160 Ift80 protein_coding protein_coding MGP_129S1SvImJ_T0061161.1 MGP_129S1SvImJ_G0027290.1 mouse_genomes_project 3 68188098 68225521 - MGP_129S1SvImJ_P0061161 Ift80 protein_coding protein_coding MGP_129S1SvImJ_T0061162.1 MGP_129S1SvImJ_G0027290.1 mouse_genomes_project 3 68193494 68225425 - Ift80 protein_coding processed_transcript MGP_129S1SvImJ_T0061163.1 MGP_129S1SvImJ_G0027290.1 mouse_genomes_project 3 68223331 68225562 - Ift80 protein_coding retained_intron MGP_129S1SvImJ_T0064218.1 MGP_129S1SvImJ_G0027971.1 mouse_genomes_project 3 149967330 149970467 + Ctbs protein_coding retained_intron MGP_129S1SvImJ_T0064219.1 MGP_129S1SvImJ_G0027971.1 mouse_genomes_project 3 149968005 149985612 + MGP_129S1SvImJ_P0064219 Ctbs protein_coding protein_coding MGP_129S1SvImJ_T0064220.1 MGP_129S1SvImJ_G0027971.1 mouse_genomes_project 3 149968013 149974876 + MGP_129S1SvImJ_P0064220 Ctbs protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064221.1 MGP_129S1SvImJ_G0027971.1 mouse_genomes_project 3 149968028 149985534 + MGP_129S1SvImJ_P0064221 Ctbs protein_coding protein_coding MGP_129S1SvImJ_T0063836.1 MGP_129S1SvImJ_G0027894.1 mouse_genomes_project 3 135664898 135735933 - MGP_129S1SvImJ_P0063836 Npnt protein_coding protein_coding MGP_129S1SvImJ_T0063837.1 MGP_129S1SvImJ_G0027894.1 mouse_genomes_project 3 135664915 135735685 - MGP_129S1SvImJ_P0063837 Npnt protein_coding protein_coding MGP_129S1SvImJ_T0063838.1 MGP_129S1SvImJ_G0027894.1 mouse_genomes_project 3 135665836 135735802 - MGP_129S1SvImJ_P0063838 Npnt protein_coding protein_coding MGP_129S1SvImJ_T0063839.1 MGP_129S1SvImJ_G0027894.1 mouse_genomes_project 3 135667583 135735685 - MGP_129S1SvImJ_P0063839 Npnt protein_coding protein_coding MGP_129S1SvImJ_T0063840.1 MGP_129S1SvImJ_G0027894.1 mouse_genomes_project 3 135667583 135735685 - MGP_129S1SvImJ_P0063840 Npnt protein_coding protein_coding MGP_129S1SvImJ_T0063841.1 MGP_129S1SvImJ_G0027894.1 mouse_genomes_project 3 135674329 135689509 - Npnt protein_coding retained_intron MGP_129S1SvImJ_T0004226.1 MGP_129S1SvImJ_G0003726.1 mouse_genomes_project 3 28295354 28296325 - 4933429H19Rik antisense antisense MGP_129S1SvImJ_T0004227.1 MGP_129S1SvImJ_G0003726.1 mouse_genomes_project 3 28295898 28296321 - 4933429H19Rik antisense antisense MGP_129S1SvImJ_T0063134.1 MGP_129S1SvImJ_G0027756.1 mouse_genomes_project 3 109393515 109410321 + MGP_129S1SvImJ_P0063134 Eps8l3 protein_coding protein_coding MGP_129S1SvImJ_T0063135.1 MGP_129S1SvImJ_G0027756.1 mouse_genomes_project 3 109393530 109397540 + Eps8l3 protein_coding processed_transcript MGP_129S1SvImJ_T0063136.1 MGP_129S1SvImJ_G0027756.1 mouse_genomes_project 3 109393548 109397916 + MGP_129S1SvImJ_P0063136 Eps8l3 protein_coding protein_coding MGP_129S1SvImJ_T0064188.1 MGP_129S1SvImJ_G0027964.1 mouse_genomes_project 3 149394914 149401731 + MGP_129S1SvImJ_P0064188 2410004B18Rik protein_coding protein_coding MGP_129S1SvImJ_T0064189.1 MGP_129S1SvImJ_G0027964.1 mouse_genomes_project 3 149394942 149401729 + MGP_129S1SvImJ_P0064189 2410004B18Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064190.1 MGP_129S1SvImJ_G0027964.1 mouse_genomes_project 3 149395090 149400712 + MGP_129S1SvImJ_P0064190 2410004B18Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064191.1 MGP_129S1SvImJ_G0027964.1 mouse_genomes_project 3 149395136 149395688 + 2410004B18Rik protein_coding retained_intron MGP_129S1SvImJ_T0064192.1 MGP_129S1SvImJ_G0027964.1 mouse_genomes_project 3 149395185 149401144 + MGP_129S1SvImJ_P0064192 2410004B18Rik protein_coding protein_coding MGP_129S1SvImJ_T0064193.1 MGP_129S1SvImJ_G0027964.1 mouse_genomes_project 3 149395544 149400755 + 2410004B18Rik protein_coding retained_intron MGP_129S1SvImJ_T0064194.1 MGP_129S1SvImJ_G0027964.1 mouse_genomes_project 3 149395986 149401100 + MGP_129S1SvImJ_P0064194 2410004B18Rik protein_coding protein_coding MGP_129S1SvImJ_T0064434.1 MGP_129S1SvImJ_G0028001.1 mouse_genomes_project 3 157949536 158282572 + MGP_129S1SvImJ_P0064434 Slc44a5 protein_coding protein_coding MGP_129S1SvImJ_T0064435.1 MGP_129S1SvImJ_G0028001.1 mouse_genomes_project 3 157949865 158279849 + MGP_129S1SvImJ_P0064435 Slc44a5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0064436.1 MGP_129S1SvImJ_G0028001.1 mouse_genomes_project 3 158228023 158231067 + Slc44a5 protein_coding processed_transcript MGP_129S1SvImJ_T0064437.1 MGP_129S1SvImJ_G0028001.1 mouse_genomes_project 3 158265665 158282572 + Slc44a5 protein_coding retained_intron MGP_129S1SvImJ_T0010533.1 MGP_129S1SvImJ_G0008649.1 mouse_genomes_project 3 72557377 72557487 + Gm24544 miRNA miRNA MGP_129S1SvImJ_T0098901.1 MGP_129S1SvImJ_G0036979.1 mouse_genomes_project 3 105398061 105400499 - Gm42700 sense_intronic sense_intronic MGP_129S1SvImJ_T0062894.1 MGP_129S1SvImJ_G0027697.1 mouse_genomes_project 3 105028350 105079531 - MGP_129S1SvImJ_P0062894 Hipk1 protein_coding protein_coding MGP_129S1SvImJ_T0062895.1 MGP_129S1SvImJ_G0027697.1 mouse_genomes_project 3 105032097 105079049 - MGP_129S1SvImJ_P0062895 Hipk1 protein_coding protein_coding MGP_129S1SvImJ_T0062896.1 MGP_129S1SvImJ_G0027697.1 mouse_genomes_project 3 105032195 105079224 - MGP_129S1SvImJ_P0062896 Hipk1 protein_coding protein_coding MGP_129S1SvImJ_T0062897.1 MGP_129S1SvImJ_G0027697.1 mouse_genomes_project 3 105033691 105079529 - MGP_129S1SvImJ_P0062897 Hipk1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062898.1 MGP_129S1SvImJ_G0027697.1 mouse_genomes_project 3 105036649 105039587 - Hipk1 protein_coding retained_intron MGP_129S1SvImJ_T0062899.1 MGP_129S1SvImJ_G0027697.1 mouse_genomes_project 3 105037898 105039536 - Hipk1 protein_coding retained_intron MGP_129S1SvImJ_T0062900.1 MGP_129S1SvImJ_G0027697.1 mouse_genomes_project 3 105042680 105079243 - Hipk1 protein_coding retained_intron MGP_129S1SvImJ_T0062795.1 MGP_129S1SvImJ_G0027681.1 mouse_genomes_project 3 103379122 103433709 - MGP_129S1SvImJ_P0062795 Vangl1 protein_coding protein_coding MGP_129S1SvImJ_T0062796.1 MGP_129S1SvImJ_G0027681.1 mouse_genomes_project 3 103383746 103395963 - MGP_129S1SvImJ_P0062796 Vangl1 protein_coding protein_coding MGP_129S1SvImJ_T0062797.1 MGP_129S1SvImJ_G0027681.1 mouse_genomes_project 3 103383749 103432979 - MGP_129S1SvImJ_P0062797 Vangl1 protein_coding protein_coding MGP_129S1SvImJ_T0062798.1 MGP_129S1SvImJ_G0027681.1 mouse_genomes_project 3 103383805 103433544 - MGP_129S1SvImJ_P0062798 Vangl1 protein_coding protein_coding MGP_129S1SvImJ_T0062799.1 MGP_129S1SvImJ_G0027681.1 mouse_genomes_project 3 103390894 103396006 - Vangl1 protein_coding retained_intron MGP_129S1SvImJ_T0062800.1 MGP_129S1SvImJ_G0027681.1 mouse_genomes_project 3 103391071 103394974 - Vangl1 protein_coding processed_transcript MGP_129S1SvImJ_T0062801.1 MGP_129S1SvImJ_G0027681.1 mouse_genomes_project 3 103413403 103426959 - MGP_129S1SvImJ_P0062801 Vangl1 protein_coding protein_coding MGP_129S1SvImJ_T0062802.1 MGP_129S1SvImJ_G0027681.1 mouse_genomes_project 3 103425876 103432897 - MGP_129S1SvImJ_P0062802 Vangl1 protein_coding protein_coding MGP_129S1SvImJ_T0010553.1 MGP_129S1SvImJ_G0008669.1 mouse_genomes_project 3 98645228 98645282 - Mir7225 miRNA miRNA MGP_129S1SvImJ_T0098359.1 MGP_129S1SvImJ_G0036444.1 mouse_genomes_project 3 157739340 157739422 + pseudogene pseudogene MGP_129S1SvImJ_T0063318.1 MGP_129S1SvImJ_G0027796.1 mouse_genomes_project 3 111863429 111868319 - MGP_129S1SvImJ_P0063318 Prmt6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063319.1 MGP_129S1SvImJ_G0027796.1 mouse_genomes_project 3 111863432 111868314 - MGP_129S1SvImJ_P0063319 Prmt6 protein_coding protein_coding MGP_129S1SvImJ_T0063320.1 MGP_129S1SvImJ_G0027796.1 mouse_genomes_project 3 111865869 111868319 - MGP_129S1SvImJ_P0063320 Prmt6 protein_coding protein_coding MGP_129S1SvImJ_T0060066.1 MGP_129S1SvImJ_G0027068.1 mouse_genomes_project 3 7323317 7328090 - Zfand1 protein_coding retained_intron MGP_129S1SvImJ_T0060067.1 MGP_129S1SvImJ_G0027068.1 mouse_genomes_project 3 7323337 7336100 - MGP_129S1SvImJ_P0060067 Zfand1 protein_coding protein_coding MGP_129S1SvImJ_T0060068.1 MGP_129S1SvImJ_G0027068.1 mouse_genomes_project 3 7324044 7336121 - MGP_129S1SvImJ_P0060068 Zfand1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060069.1 MGP_129S1SvImJ_G0027068.1 mouse_genomes_project 3 7324179 7333429 - MGP_129S1SvImJ_P0060069 Zfand1 protein_coding protein_coding MGP_129S1SvImJ_T0060070.1 MGP_129S1SvImJ_G0027068.1 mouse_genomes_project 3 7328020 7329574 - Zfand1 protein_coding retained_intron MGP_129S1SvImJ_T0060071.1 MGP_129S1SvImJ_G0027068.1 mouse_genomes_project 3 7329294 7336118 - Zfand1 protein_coding processed_transcript MGP_129S1SvImJ_T0060072.1 MGP_129S1SvImJ_G0027068.1 mouse_genomes_project 3 7335294 7336120 - Zfand1 protein_coding processed_transcript MGP_129S1SvImJ_T0063489.1 MGP_129S1SvImJ_G0027831.1 mouse_genomes_project 3 123649708 123651092 - Slc44a3 protein_coding processed_transcript MGP_129S1SvImJ_T0063490.1 MGP_129S1SvImJ_G0027831.1 mouse_genomes_project 3 123649708 123727018 - MGP_129S1SvImJ_P0063490 Slc44a3 protein_coding protein_coding MGP_129S1SvImJ_T0063491.1 MGP_129S1SvImJ_G0027831.1 mouse_genomes_project 3 123715251 123721727 - Slc44a3 protein_coding processed_transcript MGP_129S1SvImJ_T0063119.1 MGP_129S1SvImJ_G0027754.1 mouse_genomes_project 3 109157511 109172161 - MGP_129S1SvImJ_P0063119 Ahcyl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063120.1 MGP_129S1SvImJ_G0027754.1 mouse_genomes_project 3 109157513 109191496 - MGP_129S1SvImJ_P0063120 Ahcyl1 protein_coding protein_coding MGP_129S1SvImJ_T0063121.1 MGP_129S1SvImJ_G0027754.1 mouse_genomes_project 3 109158346 109159990 - Ahcyl1 protein_coding processed_transcript MGP_129S1SvImJ_T0063122.1 MGP_129S1SvImJ_G0027754.1 mouse_genomes_project 3 109158876 109164968 - Ahcyl1 protein_coding retained_intron MGP_129S1SvImJ_T0063123.1 MGP_129S1SvImJ_G0027754.1 mouse_genomes_project 3 109159785 109161877 - Ahcyl1 protein_coding retained_intron MGP_129S1SvImJ_T0063124.1 MGP_129S1SvImJ_G0027754.1 mouse_genomes_project 3 109162643 109163903 - Ahcyl1 protein_coding retained_intron MGP_129S1SvImJ_T0063125.1 MGP_129S1SvImJ_G0027754.1 mouse_genomes_project 3 109165541 109190899 - MGP_129S1SvImJ_P0063125 Ahcyl1 protein_coding protein_coding MGP_129S1SvImJ_T0063126.1 MGP_129S1SvImJ_G0027754.1 mouse_genomes_project 3 109166129 109191441 - Ahcyl1 protein_coding retained_intron MGP_129S1SvImJ_T0018050.1 MGP_129S1SvImJ_G0015527.1 mouse_genomes_project 3 146099812 146117139 + Gm43646 processed_transcript processed_transcript MGP_129S1SvImJ_T0010514.1 MGP_129S1SvImJ_G0008630.1 mouse_genomes_project 3 24325965 24326088 - Gm44464 miRNA miRNA MGP_129S1SvImJ_T0060568.1 MGP_129S1SvImJ_G0027165.1 mouse_genomes_project 3 34905838 34957532 + MGP_129S1SvImJ_P0060568 Adad1 protein_coding protein_coding MGP_129S1SvImJ_T0060569.1 MGP_129S1SvImJ_G0027165.1 mouse_genomes_project 3 34905942 34956530 + MGP_129S1SvImJ_P0060569 Adad1 protein_coding protein_coding MGP_129S1SvImJ_T0060570.1 MGP_129S1SvImJ_G0027165.1 mouse_genomes_project 3 34905989 34909667 + Adad1 protein_coding retained_intron MGP_129S1SvImJ_T0060571.1 MGP_129S1SvImJ_G0027165.1 mouse_genomes_project 3 34931625 34939785 + Adad1 protein_coding retained_intron MGP_129S1SvImJ_T0060572.1 MGP_129S1SvImJ_G0027165.1 mouse_genomes_project 3 34931762 34966720 + MGP_129S1SvImJ_P0060572 Adad1 protein_coding protein_coding MGP_129S1SvImJ_T0014304.1 MGP_129S1SvImJ_G0012393.1 mouse_genomes_project 3 125351278 125351702 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001362.1 MGP_129S1SvImJ_G0001285.1 mouse_genomes_project 3 131999995 132001095 + TEC TEC MGP_129S1SvImJ_T0063286.1 MGP_129S1SvImJ_G0027789.1 mouse_genomes_project 3 110526266 110526838 + Henmt1 protein_coding processed_transcript MGP_129S1SvImJ_T0063288.1 MGP_129S1SvImJ_G0027789.1 mouse_genomes_project 3 110526452 110533245 + MGP_129S1SvImJ_P0063288 Henmt1 protein_coding protein_coding MGP_129S1SvImJ_T0063289.1 MGP_129S1SvImJ_G0027789.1 mouse_genomes_project 3 110526477 110549283 + MGP_129S1SvImJ_P0063289 Henmt1 protein_coding protein_coding MGP_129S1SvImJ_T0063290.1 MGP_129S1SvImJ_G0027789.1 mouse_genomes_project 3 110526507 110547928 + MGP_129S1SvImJ_P0063290 Henmt1 protein_coding protein_coding MGP_129S1SvImJ_T0063291.1 MGP_129S1SvImJ_G0027789.1 mouse_genomes_project 3 110531011 110549381 + MGP_129S1SvImJ_P0063291 Henmt1 protein_coding protein_coding MGP_129S1SvImJ_T0063292.1 MGP_129S1SvImJ_G0027789.1 mouse_genomes_project 3 110531822 110548822 + MGP_129S1SvImJ_P0063292 Henmt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063293.1 MGP_129S1SvImJ_G0027789.1 mouse_genomes_project 3 110531822 110549295 + MGP_129S1SvImJ_P0063293 Henmt1 protein_coding protein_coding MGP_129S1SvImJ_T0001215.1 MGP_129S1SvImJ_G0001140.1 mouse_genomes_project 3 50248300 50253267 - TEC TEC MGP_129S1SvImJ_T0101056.1 MGP_129S1SvImJ_G0039123.1 mouse_genomes_project 3 109560851 109560982 + Gm25592 snoRNA snoRNA MGP_129S1SvImJ_T0060124.1 MGP_129S1SvImJ_G0027084.1 mouse_genomes_project 3 13174284 13247694 - MGP_129S1SvImJ_P0060124 Gm5150 protein_coding protein_coding MGP_129S1SvImJ_T0060125.1 MGP_129S1SvImJ_G0027084.1 mouse_genomes_project 3 13175484 13247589 - MGP_129S1SvImJ_P0060125 Gm5150 protein_coding protein_coding MGP_129S1SvImJ_T0063305.1 MGP_129S1SvImJ_G0027795.1 mouse_genomes_project 3 111406920 111768597 - MGP_129S1SvImJ_P0063305 Ntng1 protein_coding protein_coding MGP_129S1SvImJ_T0063306.1 MGP_129S1SvImJ_G0027795.1 mouse_genomes_project 3 111406926 111769604 - MGP_129S1SvImJ_P0063306 Ntng1 protein_coding protein_coding MGP_129S1SvImJ_T0063307.1 MGP_129S1SvImJ_G0027795.1 mouse_genomes_project 3 111407995 111769068 - MGP_129S1SvImJ_P0063307 Ntng1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063308.1 MGP_129S1SvImJ_G0027795.1 mouse_genomes_project 3 111409562 111761128 - MGP_129S1SvImJ_P0063308 Ntng1 protein_coding protein_coding MGP_129S1SvImJ_T0063309.1 MGP_129S1SvImJ_G0027795.1 mouse_genomes_project 3 111409562 111761128 - MGP_129S1SvImJ_P0063309 Ntng1 protein_coding protein_coding MGP_129S1SvImJ_T0063310.1 MGP_129S1SvImJ_G0027795.1 mouse_genomes_project 3 111409562 111761128 - MGP_129S1SvImJ_P0063310 Ntng1 protein_coding protein_coding MGP_129S1SvImJ_T0063311.1 MGP_129S1SvImJ_G0027795.1 mouse_genomes_project 3 111409562 111761128 - MGP_129S1SvImJ_P0063311 Ntng1 protein_coding protein_coding MGP_129S1SvImJ_T0063312.1 MGP_129S1SvImJ_G0027795.1 mouse_genomes_project 3 111409562 111769312 - MGP_129S1SvImJ_P0063312 Ntng1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0063313.1 MGP_129S1SvImJ_G0027795.1 mouse_genomes_project 3 111409562 111761128 - MGP_129S1SvImJ_P0063313 Ntng1 protein_coding protein_coding MGP_129S1SvImJ_T0063314.1 MGP_129S1SvImJ_G0027795.1 mouse_genomes_project 3 111409562 111761128 - MGP_129S1SvImJ_P0063314 Ntng1 protein_coding protein_coding MGP_129S1SvImJ_T0063315.1 MGP_129S1SvImJ_G0027795.1 mouse_genomes_project 3 111460494 111462804 - Ntng1 protein_coding retained_intron MGP_129S1SvImJ_T0063316.1 MGP_129S1SvImJ_G0027795.1 mouse_genomes_project 3 111460494 111761088 - Ntng1 protein_coding retained_intron MGP_129S1SvImJ_T0063317.1 MGP_129S1SvImJ_G0027795.1 mouse_genomes_project 3 111769277 111769604 - MGP_129S1SvImJ_P0063317 Ntng1 protein_coding protein_coding MGP_129S1SvImJ_T0062958.1 MGP_129S1SvImJ_G0027709.1 mouse_genomes_project 3 106104388 106109350 + MGP_129S1SvImJ_P0062958 Ppm1j protein_coding protein_coding MGP_129S1SvImJ_T0062959.1 MGP_129S1SvImJ_G0027709.1 mouse_genomes_project 3 106108940 106109350 + Ppm1j protein_coding retained_intron MGP_129S1SvImJ_T0001340.1 MGP_129S1SvImJ_G0001264.1 mouse_genomes_project 3 129069578 129073540 + TEC TEC MGP_129S1SvImJ_T0063964.1 MGP_129S1SvImJ_G0027915.1 mouse_genomes_project 3 140560203 140562781 - protein_coding lincRNA MGP_129S1SvImJ_T0062077.1 MGP_129S1SvImJ_G0027471.1 mouse_genomes_project 3 90866314 90872210 + MGP_129S1SvImJ_P0062077 S100a16 protein_coding protein_coding MGP_129S1SvImJ_T0062078.1 MGP_129S1SvImJ_G0027471.1 mouse_genomes_project 3 90866375 90872076 + MGP_129S1SvImJ_P0062078 S100a16 protein_coding protein_coding MGP_129S1SvImJ_T0062079.1 MGP_129S1SvImJ_G0027471.1 mouse_genomes_project 3 90866385 90871797 + S100a16 protein_coding processed_transcript MGP_129S1SvImJ_T0062080.1 MGP_129S1SvImJ_G0027471.1 mouse_genomes_project 3 90867945 90871989 + MGP_129S1SvImJ_P0062080 S100a16 protein_coding protein_coding MGP_129S1SvImJ_T0062081.1 MGP_129S1SvImJ_G0027471.1 mouse_genomes_project 3 90868349 90871491 + MGP_129S1SvImJ_P0062081 S100a16 protein_coding protein_coding MGP_129S1SvImJ_T0062082.1 MGP_129S1SvImJ_G0027471.1 mouse_genomes_project 3 90870207 90871810 + MGP_129S1SvImJ_P0062082 S100a16 protein_coding protein_coding MGP_129S1SvImJ_T0062083.1 MGP_129S1SvImJ_G0027471.1 mouse_genomes_project 3 90870210 90871924 + MGP_129S1SvImJ_P0062083 S100a16 protein_coding protein_coding MGP_129S1SvImJ_T0062084.1 MGP_129S1SvImJ_G0027471.1 mouse_genomes_project 3 90870222 90872213 + MGP_129S1SvImJ_P0062084 S100a16 protein_coding protein_coding MGP_129S1SvImJ_T0099046.1 MGP_129S1SvImJ_G0037114.1 mouse_genomes_project 3 158671413 158695414 + Gm38139 sense_overlapping sense_overlapping MGP_129S1SvImJ_T0010551.1 MGP_129S1SvImJ_G0008667.1 mouse_genomes_project 3 96504121 96504184 - Mir7014 miRNA miRNA MGP_129S1SvImJ_T0014173.1 MGP_129S1SvImJ_G0012262.1 mouse_genomes_project 3 88436042 88436189 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010558.1 MGP_129S1SvImJ_G0008674.1 mouse_genomes_project 3 117847622 117847676 + Mir669n miRNA miRNA MGP_129S1SvImJ_T0001370.1 MGP_129S1SvImJ_G0001293.1 mouse_genomes_project 3 133666865 133668244 + TEC TEC MGP_129S1SvImJ_T0014356.1 MGP_129S1SvImJ_G0012445.1 mouse_genomes_project 3 141904300 141904778 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063328.1 MGP_129S1SvImJ_G0027800.1 mouse_genomes_project 3 115401190 115426187 - MGP_129S1SvImJ_P0063328 Rnpc3 protein_coding protein_coding MGP_129S1SvImJ_T0063329.1 MGP_129S1SvImJ_G0027800.1 mouse_genomes_project 3 115401573 115426071 - MGP_129S1SvImJ_P0063329 Rnpc3 protein_coding protein_coding MGP_129S1SvImJ_T0063330.1 MGP_129S1SvImJ_G0027800.1 mouse_genomes_project 3 115401580 115426187 - MGP_129S1SvImJ_P0063330 Rnpc3 protein_coding protein_coding MGP_129S1SvImJ_T0063331.1 MGP_129S1SvImJ_G0027800.1 mouse_genomes_project 3 115402452 115426187 - MGP_129S1SvImJ_P0063331 Rnpc3 protein_coding protein_coding MGP_129S1SvImJ_T0063332.1 MGP_129S1SvImJ_G0027800.1 mouse_genomes_project 3 115407249 115411478 - Rnpc3 protein_coding processed_transcript MGP_129S1SvImJ_T0063333.1 MGP_129S1SvImJ_G0027800.1 mouse_genomes_project 3 115412590 115418003 - Rnpc3 protein_coding processed_transcript MGP_129S1SvImJ_T0063334.1 MGP_129S1SvImJ_G0027800.1 mouse_genomes_project 3 115412839 115417354 - Rnpc3 protein_coding processed_transcript MGP_129S1SvImJ_T0063335.1 MGP_129S1SvImJ_G0027800.1 mouse_genomes_project 3 115423115 115426117 - Rnpc3 protein_coding retained_intron MGP_129S1SvImJ_T0014179.1 MGP_129S1SvImJ_G0012268.1 mouse_genomes_project 3 91064140 91065043 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102467.1 MGP_129S1SvImJ_G0040301.1 mouse_genomes_project 3 83675693 83700348 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0004232.1 MGP_129S1SvImJ_G0003730.1 mouse_genomes_project 3 30576003 30623482 + Gm37459 antisense antisense MGP_129S1SvImJ_T0061183.1 MGP_129S1SvImJ_G0027295.1 mouse_genomes_project 3 68567610 68824291 + MGP_129S1SvImJ_P0061183 Ppm1l protein_coding protein_coding MGP_129S1SvImJ_T0061184.1 MGP_129S1SvImJ_G0027295.1 mouse_genomes_project 3 68760718 68761480 + Ppm1l protein_coding retained_intron MGP_129S1SvImJ_T0061185.1 MGP_129S1SvImJ_G0027295.1 mouse_genomes_project 3 68805999 68816403 + Ppm1l protein_coding processed_transcript MGP_129S1SvImJ_T0061186.1 MGP_129S1SvImJ_G0027295.1 mouse_genomes_project 3 68812484 68816584 + Ppm1l protein_coding retained_intron MGP_129S1SvImJ_T0098868.1 MGP_129S1SvImJ_G0036947.1 mouse_genomes_project 3 79378120 79381635 - Gm26984 sense_intronic sense_intronic MGP_129S1SvImJ_T0014025.1 MGP_129S1SvImJ_G0012114.1 mouse_genomes_project 3 39491066 39491529 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101076.1 MGP_129S1SvImJ_G0039143.1 mouse_genomes_project 3 157656778 157656894 + Gm22206 snoRNA snoRNA MGP_129S1SvImJ_T0014258.1 MGP_129S1SvImJ_G0012347.1 mouse_genomes_project 3 110169438 110169863 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060714.1 MGP_129S1SvImJ_G0027190.1 mouse_genomes_project 3 44668019 44674041 - MGP_129S1SvImJ_P0060714 Pabpc4l protein_coding protein_coding MGP_129S1SvImJ_T0060715.1 MGP_129S1SvImJ_G0027190.1 mouse_genomes_project 3 44668019 44673763 - MGP_129S1SvImJ_P0060715 Pabpc4l protein_coding protein_coding MGP_129S1SvImJ_T0060716.1 MGP_129S1SvImJ_G0027190.1 mouse_genomes_project 3 44672513 44673763 - MGP_129S1SvImJ_P0060716 Pabpc4l protein_coding protein_coding MGP_129S1SvImJ_T0060717.1 MGP_129S1SvImJ_G0027190.1 mouse_genomes_project 3 44672877 44673742 - MGP_129S1SvImJ_P0060717 Pabpc4l protein_coding protein_coding MGP_129S1SvImJ_T0102483.1 MGP_129S1SvImJ_G0040317.1 mouse_genomes_project 3 94449775 94450180 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0014076.1 MGP_129S1SvImJ_G0012165.1 mouse_genomes_project 3 57232854 57233271 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014101.1 MGP_129S1SvImJ_G0012190.1 mouse_genomes_project 3 65067692 65068116 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062181.1 MGP_129S1SvImJ_G0027542.1 mouse_genomes_project 3 94792168 94794475 - MGP_129S1SvImJ_P0062181 protein_coding protein_coding MGP_129S1SvImJ_T0001364.1 MGP_129S1SvImJ_G0001287.1 mouse_genomes_project 3 132198796 132200467 + TEC TEC MGP_129S1SvImJ_T0007488.1 MGP_129S1SvImJ_G0006138.1 mouse_genomes_project 3 19554613 19566890 - Gm38324 lincRNA lincRNA MGP_129S1SvImJ_T0010576.1 MGP_129S1SvImJ_G0008692.1 mouse_genomes_project 3 143139137 143139259 + Mir7j miRNA miRNA MGP_129S1SvImJ_T0063197.1 MGP_129S1SvImJ_G0027772.1 mouse_genomes_project 3 109796221 109819806 + MGP_129S1SvImJ_P0063197 Psma5 protein_coding protein_coding MGP_129S1SvImJ_T0063198.1 MGP_129S1SvImJ_G0027772.1 mouse_genomes_project 3 109808706 109819728 + MGP_129S1SvImJ_P0063198 Psma5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0101909.1 MGP_129S1SvImJ_G0039820.1 mouse_genomes_project 3 63869779 63870012 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0099740.1 MGP_129S1SvImJ_G0037807.1 mouse_genomes_project 3 59020364 59020470 - Gm24382 snRNA snRNA MGP_129S1SvImJ_T0014065.1 MGP_129S1SvImJ_G0012154.1 mouse_genomes_project 3 55603602 55604073 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101019.1 MGP_129S1SvImJ_G0039086.1 mouse_genomes_project 3 39444493 39444618 - Gm25487 snoRNA snoRNA MGP_129S1SvImJ_T0061151.1 MGP_129S1SvImJ_G0027289.1 mouse_genomes_project 3 68090738 68093316 + MGP_129S1SvImJ_P0061151 1110032F04Rik protein_coding protein_coding MGP_129S1SvImJ_T0062330.1 MGP_129S1SvImJ_G0027569.1 mouse_genomes_project 3 95823993 95824934 - Scnm1 protein_coding retained_intron MGP_129S1SvImJ_T0062331.1 MGP_129S1SvImJ_G0027569.1 mouse_genomes_project 3 95823994 95828459 - Scnm1 protein_coding retained_intron MGP_129S1SvImJ_T0062332.1 MGP_129S1SvImJ_G0027569.1 mouse_genomes_project 3 95823996 95824563 - Scnm1 protein_coding retained_intron MGP_129S1SvImJ_T0062333.1 MGP_129S1SvImJ_G0027569.1 mouse_genomes_project 3 95823998 95824736 - Scnm1 protein_coding retained_intron MGP_129S1SvImJ_T0062334.1 MGP_129S1SvImJ_G0027569.1 mouse_genomes_project 3 95823998 95828581 - MGP_129S1SvImJ_P0062334 Scnm1 protein_coding protein_coding MGP_129S1SvImJ_T0062335.1 MGP_129S1SvImJ_G0027569.1 mouse_genomes_project 3 95824000 95825952 - Scnm1 protein_coding processed_transcript MGP_129S1SvImJ_T0062336.1 MGP_129S1SvImJ_G0027569.1 mouse_genomes_project 3 95824003 95828697 - MGP_129S1SvImJ_P0062336 Scnm1 protein_coding protein_coding MGP_129S1SvImJ_T0062338.1 MGP_129S1SvImJ_G0027569.1 mouse_genomes_project 3 95824567 95828625 - Scnm1 protein_coding retained_intron MGP_129S1SvImJ_T0062566.1 MGP_129S1SvImJ_G0027618.1 mouse_genomes_project 3 97399660 97404989 + MGP_129S1SvImJ_P0062566 Hfe2 protein_coding protein_coding MGP_129S1SvImJ_T0063235.1 MGP_129S1SvImJ_G0027780.1 mouse_genomes_project 3 110117216 110123250 - MGP_129S1SvImJ_P0063235 protein_coding protein_coding MGP_129S1SvImJ_T0063236.1 MGP_129S1SvImJ_G0027780.1 mouse_genomes_project 3 110117216 110122954 - MGP_129S1SvImJ_P0063236 protein_coding protein_coding MGP_129S1SvImJ_T0010552.1 MGP_129S1SvImJ_G0008668.1 mouse_genomes_project 3 97027299 97027440 + Gm44492 miRNA miRNA MGP_129S1SvImJ_T0061688.1 MGP_129S1SvImJ_G0027406.1 mouse_genomes_project 3 88869087 88900896 + MGP_129S1SvImJ_P0061688 2810403A07Rik protein_coding protein_coding MGP_129S1SvImJ_T0061689.1 MGP_129S1SvImJ_G0027406.1 mouse_genomes_project 3 88869098 88871347 + 2810403A07Rik protein_coding retained_intron MGP_129S1SvImJ_T0061690.1 MGP_129S1SvImJ_G0027406.1 mouse_genomes_project 3 88869111 88900826 + MGP_129S1SvImJ_P0061690 2810403A07Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061691.1 MGP_129S1SvImJ_G0027406.1 mouse_genomes_project 3 88869111 88900534 + MGP_129S1SvImJ_P0061691 2810403A07Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061692.1 MGP_129S1SvImJ_G0027406.1 mouse_genomes_project 3 88869117 88886901 + 2810403A07Rik protein_coding retained_intron MGP_129S1SvImJ_T0061693.1 MGP_129S1SvImJ_G0027406.1 mouse_genomes_project 3 88869121 88899975 + MGP_129S1SvImJ_P0061693 2810403A07Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061694.1 MGP_129S1SvImJ_G0027406.1 mouse_genomes_project 3 88876466 88896881 + 2810403A07Rik protein_coding processed_transcript MGP_129S1SvImJ_T0061695.1 MGP_129S1SvImJ_G0027406.1 mouse_genomes_project 3 88884126 88886204 + 2810403A07Rik protein_coding retained_intron MGP_129S1SvImJ_T0061696.1 MGP_129S1SvImJ_G0027406.1 mouse_genomes_project 3 88884927 88896960 + 2810403A07Rik protein_coding retained_intron MGP_129S1SvImJ_T0061697.1 MGP_129S1SvImJ_G0027406.1 mouse_genomes_project 3 88896752 88899056 + 2810403A07Rik protein_coding processed_transcript MGP_129S1SvImJ_T0001335.1 MGP_129S1SvImJ_G0001259.1 mouse_genomes_project 3 126736269 126737217 - TEC TEC MGP_129S1SvImJ_T0007656.1 MGP_129S1SvImJ_G0006265.1 mouse_genomes_project 3 104315096 104316414 + Gm43062 lincRNA lincRNA MGP_129S1SvImJ_T0060978.1 MGP_129S1SvImJ_G0027245.1 mouse_genomes_project 3 58086944 58089935 - MGP_129S1SvImJ_P0060978 P2ry13 protein_coding protein_coding MGP_129S1SvImJ_T0060989.1 MGP_129S1SvImJ_G0027248.1 mouse_genomes_project 3 58578761 58602283 + MGP_129S1SvImJ_P0060989 Gm5538 protein_coding protein_coding MGP_129S1SvImJ_T0007777.1 MGP_129S1SvImJ_G0006363.1 mouse_genomes_project 3 153214995 153324639 - Gm31121 lincRNA lincRNA MGP_129S1SvImJ_T0060854.1 MGP_129S1SvImJ_G0027217.1 mouse_genomes_project 3 53514011 53518688 - MGP_129S1SvImJ_P0060854 Rfxap protein_coding protein_coding MGP_129S1SvImJ_T0060855.1 MGP_129S1SvImJ_G0027217.1 mouse_genomes_project 3 53515117 53516663 - Rfxap protein_coding processed_transcript MGP_129S1SvImJ_T0060856.1 MGP_129S1SvImJ_G0027217.1 mouse_genomes_project 3 53516670 53518317 - Rfxap protein_coding processed_transcript MGP_129S1SvImJ_T0014240.1 MGP_129S1SvImJ_G0012329.1 mouse_genomes_project 3 104982288 104982688 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062547.1 MGP_129S1SvImJ_G0027606.1 mouse_genomes_project 3 96984068 96989563 + MGP_129S1SvImJ_P0062547 Sf3b4 protein_coding protein_coding MGP_129S1SvImJ_T0062548.1 MGP_129S1SvImJ_G0027606.1 mouse_genomes_project 3 96984286 96985086 + Sf3b4 protein_coding retained_intron MGP_129S1SvImJ_T0062384.1 MGP_129S1SvImJ_G0027580.1 mouse_genomes_project 3 95999011 96003882 + Fam63a protein_coding processed_transcript MGP_129S1SvImJ_T0062385.1 MGP_129S1SvImJ_G0027580.1 mouse_genomes_project 3 95999083 96005757 + Fam63a protein_coding processed_transcript MGP_129S1SvImJ_T0062386.1 MGP_129S1SvImJ_G0027580.1 mouse_genomes_project 3 95999153 96001401 + Fam63a protein_coding processed_transcript MGP_129S1SvImJ_T0062387.1 MGP_129S1SvImJ_G0027580.1 mouse_genomes_project 3 95999511 96002776 + Fam63a protein_coding processed_transcript MGP_129S1SvImJ_T0062388.1 MGP_129S1SvImJ_G0027580.1 mouse_genomes_project 3 96000828 96014425 + MGP_129S1SvImJ_P0062388 Fam63a protein_coding protein_coding MGP_129S1SvImJ_T0062389.1 MGP_129S1SvImJ_G0027580.1 mouse_genomes_project 3 96000828 96014425 + MGP_129S1SvImJ_P0062389 Fam63a protein_coding protein_coding MGP_129S1SvImJ_T0062390.1 MGP_129S1SvImJ_G0027580.1 mouse_genomes_project 3 96001099 96010050 + Fam63a protein_coding retained_intron MGP_129S1SvImJ_T0062391.1 MGP_129S1SvImJ_G0027580.1 mouse_genomes_project 3 96001486 96005757 + Fam63a protein_coding processed_transcript MGP_129S1SvImJ_T0062392.1 MGP_129S1SvImJ_G0027580.1 mouse_genomes_project 3 96003757 96005935 + MGP_129S1SvImJ_P0062392 Fam63a protein_coding protein_coding MGP_129S1SvImJ_T0062393.1 MGP_129S1SvImJ_G0027580.1 mouse_genomes_project 3 96004116 96005881 + Fam63a protein_coding processed_transcript MGP_129S1SvImJ_T0062394.1 MGP_129S1SvImJ_G0027580.1 mouse_genomes_project 3 96005868 96014422 + MGP_129S1SvImJ_P0062394 Fam63a protein_coding protein_coding MGP_129S1SvImJ_T0062395.1 MGP_129S1SvImJ_G0027580.1 mouse_genomes_project 3 96010226 96014420 + Fam63a protein_coding processed_transcript MGP_129S1SvImJ_T0018011.1 MGP_129S1SvImJ_G0015515.1 mouse_genomes_project 3 106075434 106096627 - Gm43584 processed_transcript processed_transcript MGP_129S1SvImJ_T0007531.1 MGP_129S1SvImJ_G0006172.1 mouse_genomes_project 3 39290301 39294828 - Gm16508 lincRNA lincRNA MGP_129S1SvImJ_T0061536.1 MGP_129S1SvImJ_G0027379.1 mouse_genomes_project 3 88157919 88163747 - Hapln2 protein_coding retained_intron MGP_129S1SvImJ_T0061537.1 MGP_129S1SvImJ_G0027379.1 mouse_genomes_project 3 88158230 88163642 - MGP_129S1SvImJ_P0061537 Hapln2 protein_coding protein_coding MGP_129S1SvImJ_T0061538.1 MGP_129S1SvImJ_G0027379.1 mouse_genomes_project 3 88158807 88159843 - Hapln2 protein_coding retained_intron MGP_129S1SvImJ_T0061539.1 MGP_129S1SvImJ_G0027379.1 mouse_genomes_project 3 88159703 88163656 - MGP_129S1SvImJ_P0061539 Hapln2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062706.1 MGP_129S1SvImJ_G0027653.1 mouse_genomes_project 3 99448047 99460980 - MGP_129S1SvImJ_P0062706 protein_coding protein_coding MGP_129S1SvImJ_T0062709.1 MGP_129S1SvImJ_G0027653.1 mouse_genomes_project 3 99449818 99460897 - MGP_129S1SvImJ_P0062709 protein_coding protein_coding MGP_129S1SvImJ_T0001406.1 MGP_129S1SvImJ_G0001329.1 mouse_genomes_project 3 158135767 158138000 + TEC TEC MGP_129S1SvImJ_T0001339.1 MGP_129S1SvImJ_G0001263.1 mouse_genomes_project 3 129050801 129053280 + TEC TEC MGP_129S1SvImJ_T0098883.1 MGP_129S1SvImJ_G0036961.1 mouse_genomes_project 3 101800426 101802229 - Gm43463 sense_intronic sense_intronic MGP_129S1SvImJ_T0063809.1 MGP_129S1SvImJ_G0027887.1 mouse_genomes_project 3 134085567 134101531 - MGP_129S1SvImJ_P0063809 Cyp2u1 protein_coding protein_coding MGP_129S1SvImJ_T0063810.1 MGP_129S1SvImJ_G0027887.1 mouse_genomes_project 3 134091594 134101507 - MGP_129S1SvImJ_P0063810 Cyp2u1 protein_coding protein_coding MGP_129S1SvImJ_T0063811.1 MGP_129S1SvImJ_G0027887.1 mouse_genomes_project 3 134092730 134101534 - Cyp2u1 protein_coding processed_transcript MGP_129S1SvImJ_T0014257.1 MGP_129S1SvImJ_G0012346.1 mouse_genomes_project 3 110003842 110004221 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060198.1 MGP_129S1SvImJ_G0027101.1 mouse_genomes_project 3 17444710 17472559 - MGP_129S1SvImJ_P0060198 Cpa3 protein_coding protein_coding MGP_129S1SvImJ_T0060199.1 MGP_129S1SvImJ_G0027101.1 mouse_genomes_project 3 17457894 17471125 - Cpa3 protein_coding processed_transcript MGP_129S1SvImJ_T0007722.1 MGP_129S1SvImJ_G0006318.1 mouse_genomes_project 3 137009140 137020640 + Gm43194 lincRNA lincRNA MGP_129S1SvImJ_T0007723.1 MGP_129S1SvImJ_G0006318.1 mouse_genomes_project 3 137009278 137022309 + Gm43194 lincRNA lincRNA MGP_129S1SvImJ_T0102454.1 MGP_129S1SvImJ_G0040288.1 mouse_genomes_project 3 11908982 11917019 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0060220.1 MGP_129S1SvImJ_G0027106.1 mouse_genomes_project 3 22656003 23614573 - MGP_129S1SvImJ_P0060220 Nlgn1 protein_coding protein_coding MGP_129S1SvImJ_T0060221.1 MGP_129S1SvImJ_G0027106.1 mouse_genomes_project 3 22661603 23401164 - MGP_129S1SvImJ_P0060221 Nlgn1 protein_coding protein_coding MGP_129S1SvImJ_T0060222.1 MGP_129S1SvImJ_G0027106.1 mouse_genomes_project 3 22661603 23401164 - MGP_129S1SvImJ_P0060222 Nlgn1 protein_coding protein_coding MGP_129S1SvImJ_T0060223.1 MGP_129S1SvImJ_G0027106.1 mouse_genomes_project 3 22663223 23424098 - MGP_129S1SvImJ_P0060223 Nlgn1 protein_coding protein_coding MGP_129S1SvImJ_T0060224.1 MGP_129S1SvImJ_G0027106.1 mouse_genomes_project 3 23399099 23613983 - Nlgn1 protein_coding retained_intron MGP_129S1SvImJ_T0060473.1 MGP_129S1SvImJ_G0027151.1 mouse_genomes_project 3 33492980 33497615 + Atp11b protein_coding retained_intron MGP_129S1SvImJ_T0060474.1 MGP_129S1SvImJ_G0027151.1 mouse_genomes_project 3 33495736 33571781 + Atp11b protein_coding processed_transcript MGP_129S1SvImJ_T0060475.1 MGP_129S1SvImJ_G0027151.1 mouse_genomes_project 3 33495736 33600481 + Atp11b protein_coding retained_intron MGP_129S1SvImJ_T0060476.1 MGP_129S1SvImJ_G0027151.1 mouse_genomes_project 3 33495736 33600486 + MGP_129S1SvImJ_P0060476 Atp11b protein_coding protein_coding MGP_129S1SvImJ_T0060477.1 MGP_129S1SvImJ_G0027151.1 mouse_genomes_project 3 33528383 33547212 + MGP_129S1SvImJ_P0060477 Atp11b protein_coding protein_coding MGP_129S1SvImJ_T0060478.1 MGP_129S1SvImJ_G0027151.1 mouse_genomes_project 3 33529874 33600484 + MGP_129S1SvImJ_P0060478 Atp11b protein_coding protein_coding MGP_129S1SvImJ_T0060479.1 MGP_129S1SvImJ_G0027151.1 mouse_genomes_project 3 33549901 33552346 + Atp11b protein_coding processed_transcript MGP_129S1SvImJ_T0060480.1 MGP_129S1SvImJ_G0027151.1 mouse_genomes_project 3 33569100 33571282 + Atp11b protein_coding retained_intron MGP_129S1SvImJ_T0060481.1 MGP_129S1SvImJ_G0027151.1 mouse_genomes_project 3 33582464 33600481 + Atp11b protein_coding retained_intron MGP_129S1SvImJ_T0060482.1 MGP_129S1SvImJ_G0027151.1 mouse_genomes_project 3 33582797 33600486 + MGP_129S1SvImJ_P0060482 Atp11b protein_coding protein_coding MGP_129S1SvImJ_T0061739.1 MGP_129S1SvImJ_G0027415.1 mouse_genomes_project 3 89277975 89286348 - MGP_129S1SvImJ_P0061739 Fdps protein_coding protein_coding MGP_129S1SvImJ_T0061740.1 MGP_129S1SvImJ_G0027415.1 mouse_genomes_project 3 89277975 89286277 - MGP_129S1SvImJ_P0061740 Fdps protein_coding protein_coding MGP_129S1SvImJ_T0061741.1 MGP_129S1SvImJ_G0027415.1 mouse_genomes_project 3 89278136 89280067 - MGP_129S1SvImJ_P0061741 Fdps protein_coding protein_coding MGP_129S1SvImJ_T0061742.1 MGP_129S1SvImJ_G0027415.1 mouse_genomes_project 3 89279443 89280371 - Fdps protein_coding retained_intron MGP_129S1SvImJ_T0061743.1 MGP_129S1SvImJ_G0027415.1 mouse_genomes_project 3 89279751 89285704 - MGP_129S1SvImJ_P0061743 Fdps protein_coding protein_coding MGP_129S1SvImJ_T0061744.1 MGP_129S1SvImJ_G0027415.1 mouse_genomes_project 3 89279986 89286241 - MGP_129S1SvImJ_P0061744 Fdps protein_coding protein_coding MGP_129S1SvImJ_T0061745.1 MGP_129S1SvImJ_G0027415.1 mouse_genomes_project 3 89283327 89286280 - Fdps protein_coding retained_intron MGP_129S1SvImJ_T0063195.1 MGP_129S1SvImJ_G0027771.1 mouse_genomes_project 3 109750591 109765764 - MGP_129S1SvImJ_P0063195 Sypl2 protein_coding protein_coding MGP_129S1SvImJ_T0063196.1 MGP_129S1SvImJ_G0027771.1 mouse_genomes_project 3 109756420 109765759 - Sypl2 protein_coding retained_intron MGP_129S1SvImJ_T0063006.1 MGP_129S1SvImJ_G0027721.1 mouse_genomes_project 3 107254328 107291205 + MGP_129S1SvImJ_P0063006 Adora3 protein_coding protein_coding MGP_129S1SvImJ_T0063011.1 MGP_129S1SvImJ_G0027721.1 mouse_genomes_project 3 107287272 107291778 + MGP_129S1SvImJ_P0063011 Adora3 protein_coding protein_coding MGP_129S1SvImJ_T0063013.1 MGP_129S1SvImJ_G0027721.1 mouse_genomes_project 3 107287546 107289209 + Adora3 protein_coding retained_intron MGP_129S1SvImJ_T0099763.1 MGP_129S1SvImJ_G0037830.1 mouse_genomes_project 3 90223304 90223469 - Gm24046 snRNA snRNA MGP_129S1SvImJ_T0001226.1 MGP_129S1SvImJ_G0001150.1 mouse_genomes_project 3 50576211 50578009 - TEC TEC MGP_129S1SvImJ_T0014303.1 MGP_129S1SvImJ_G0012392.1 mouse_genomes_project 3 125220592 125220787 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007704.1 MGP_129S1SvImJ_G0006302.1 mouse_genomes_project 3 131279137 131281155 - 4933424H11Rik lincRNA lincRNA MGP_129S1SvImJ_T0060048.1 MGP_129S1SvImJ_G0027060.1 mouse_genomes_project 3 7145579 7149657 - MGP_129S1SvImJ_P0060048 Pmp2 protein_coding protein_coding MGP_129S1SvImJ_T0101070.1 MGP_129S1SvImJ_G0039137.1 mouse_genomes_project 3 135573481 135573592 - Gm22322 snoRNA snoRNA MGP_129S1SvImJ_T0001180.1 MGP_129S1SvImJ_G0001106.1 mouse_genomes_project 3 35853391 35853947 + TEC TEC MGP_129S1SvImJ_T0099800.1 MGP_129S1SvImJ_G0037867.1 mouse_genomes_project 3 152979488 152979594 - Gm26468 snRNA snRNA MGP_129S1SvImJ_T0014216.1 MGP_129S1SvImJ_G0012305.1 mouse_genomes_project 3 99888136 99888322 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007640.1 MGP_129S1SvImJ_G0006251.1 mouse_genomes_project 3 98864512 98873389 - Gm15999 lincRNA lincRNA MGP_129S1SvImJ_T0060109.1 MGP_129S1SvImJ_G0027080.1 mouse_genomes_project 3 12451928 12486841 - MGP_129S1SvImJ_P0060109 Gm9733 protein_coding protein_coding MGP_129S1SvImJ_T0063038.1 MGP_129S1SvImJ_G0027729.1 mouse_genomes_project 3 107504567 107527594 + MGP_129S1SvImJ_P0063038 Chia1 protein_coding protein_coding MGP_129S1SvImJ_T0063039.1 MGP_129S1SvImJ_G0027729.1 mouse_genomes_project 3 107504728 107524322 + MGP_129S1SvImJ_P0063039 Chia1 protein_coding protein_coding MGP_129S1SvImJ_T0063040.1 MGP_129S1SvImJ_G0027729.1 mouse_genomes_project 3 107517838 107523938 + Chia1 protein_coding retained_intron MGP_129S1SvImJ_T0061030.1 MGP_129S1SvImJ_G0027259.1 mouse_genomes_project 3 61446444 61486986 - MGP_129S1SvImJ_P0061030 Dhx36 protein_coding protein_coding MGP_129S1SvImJ_T0061031.1 MGP_129S1SvImJ_G0027259.1 mouse_genomes_project 3 61449076 61451019 - Dhx36 protein_coding retained_intron MGP_129S1SvImJ_T0061032.1 MGP_129S1SvImJ_G0027259.1 mouse_genomes_project 3 61463352 61467787 - Dhx36 protein_coding retained_intron MGP_129S1SvImJ_T0061033.1 MGP_129S1SvImJ_G0027259.1 mouse_genomes_project 3 61477095 61481296 - Dhx36 protein_coding retained_intron MGP_129S1SvImJ_T0010521.1 MGP_129S1SvImJ_G0008637.1 mouse_genomes_project 3 32318550 32318629 + Mir1897 miRNA miRNA MGP_129S1SvImJ_T0062848.1 MGP_129S1SvImJ_G0027689.1 mouse_genomes_project 3 104301305 104310931 + MGP_129S1SvImJ_P0062848 Nras protein_coding protein_coding MGP_129S1SvImJ_T0062849.1 MGP_129S1SvImJ_G0027689.1 mouse_genomes_project 3 104301368 104305547 + MGP_129S1SvImJ_P0062849 Nras protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062850.1 MGP_129S1SvImJ_G0027689.1 mouse_genomes_project 3 104301387 104307397 + MGP_129S1SvImJ_P0062850 Nras protein_coding protein_coding MGP_129S1SvImJ_T0062851.1 MGP_129S1SvImJ_G0027689.1 mouse_genomes_project 3 104301611 104303331 + MGP_129S1SvImJ_P0062851 Nras protein_coding protein_coding MGP_129S1SvImJ_T0062852.1 MGP_129S1SvImJ_G0027689.1 mouse_genomes_project 3 104301613 104306427 + MGP_129S1SvImJ_P0062852 Nras protein_coding protein_coding MGP_129S1SvImJ_T0062853.1 MGP_129S1SvImJ_G0027689.1 mouse_genomes_project 3 104301760 104305546 + MGP_129S1SvImJ_P0062853 Nras protein_coding protein_coding MGP_129S1SvImJ_T0062854.1 MGP_129S1SvImJ_G0027689.1 mouse_genomes_project 3 104301920 104309468 + MGP_129S1SvImJ_P0062854 Nras protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062855.1 MGP_129S1SvImJ_G0027689.1 mouse_genomes_project 3 104301920 104310923 + MGP_129S1SvImJ_P0062855 Nras protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062856.1 MGP_129S1SvImJ_G0027689.1 mouse_genomes_project 3 104302005 104305977 + Nras protein_coding retained_intron MGP_129S1SvImJ_T0013991.1 MGP_129S1SvImJ_G0012080.1 mouse_genomes_project 3 28333690 28333958 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060380.1 MGP_129S1SvImJ_G0027137.1 mouse_genomes_project 3 30075619 30102399 - MGP_129S1SvImJ_P0060380 Kcnmb3 protein_coding protein_coding MGP_129S1SvImJ_T0063513.1 MGP_129S1SvImJ_G0027836.1 mouse_genomes_project 3 124273190 124425259 + MGP_129S1SvImJ_P0063513 Abca4 protein_coding protein_coding MGP_129S1SvImJ_T0063514.1 MGP_129S1SvImJ_G0027836.1 mouse_genomes_project 3 124276827 124335013 + Abca4 protein_coding processed_transcript MGP_129S1SvImJ_T0063515.1 MGP_129S1SvImJ_G0027836.1 mouse_genomes_project 3 124308649 124322094 + Abca4 protein_coding processed_transcript MGP_129S1SvImJ_T0063516.1 MGP_129S1SvImJ_G0027836.1 mouse_genomes_project 3 124357252 124366866 + Abca4 protein_coding retained_intron MGP_129S1SvImJ_T0063517.1 MGP_129S1SvImJ_G0027836.1 mouse_genomes_project 3 124358966 124364677 + Abca4 protein_coding retained_intron MGP_129S1SvImJ_T0063518.1 MGP_129S1SvImJ_G0027836.1 mouse_genomes_project 3 124370210 124425261 + MGP_129S1SvImJ_P0063518 Abca4 protein_coding protein_coding MGP_129S1SvImJ_T0063519.1 MGP_129S1SvImJ_G0027836.1 mouse_genomes_project 3 124406448 124409891 + Abca4 protein_coding retained_intron MGP_129S1SvImJ_T0063520.1 MGP_129S1SvImJ_G0027836.1 mouse_genomes_project 3 124409389 124415550 + Abca4 protein_coding retained_intron MGP_129S1SvImJ_T0063521.1 MGP_129S1SvImJ_G0027836.1 mouse_genomes_project 3 124415163 124416217 + Abca4 protein_coding processed_transcript MGP_129S1SvImJ_T0063522.1 MGP_129S1SvImJ_G0027836.1 mouse_genomes_project 3 124418210 124425323 + Abca4 protein_coding retained_intron MGP_129S1SvImJ_T0011573.1 MGP_129S1SvImJ_G0009689.1 mouse_genomes_project 3 157553204 157553472 + Gm22136 misc_RNA misc_RNA MGP_129S1SvImJ_T0063760.1 MGP_129S1SvImJ_G0027878.1 mouse_genomes_project 3 132607923 132677065 - MGP_129S1SvImJ_P0063760 Ccdc109b protein_coding protein_coding MGP_129S1SvImJ_T0063761.1 MGP_129S1SvImJ_G0027878.1 mouse_genomes_project 3 132607938 132676907 - MGP_129S1SvImJ_P0063761 Ccdc109b protein_coding protein_coding MGP_129S1SvImJ_T0063762.1 MGP_129S1SvImJ_G0027878.1 mouse_genomes_project 3 132610046 132676848 - MGP_129S1SvImJ_P0063762 Ccdc109b protein_coding protein_coding MGP_129S1SvImJ_T0063763.1 MGP_129S1SvImJ_G0027878.1 mouse_genomes_project 3 132621908 132676983 - MGP_129S1SvImJ_P0063763 Ccdc109b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0007729.1 MGP_129S1SvImJ_G0006324.1 mouse_genomes_project 3 140284408 140301927 + lincRNA lincRNA MGP_129S1SvImJ_T0018007.1 MGP_129S1SvImJ_G0015513.1 mouse_genomes_project 3 101542840 101545301 + 4930406D18Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018008.1 MGP_129S1SvImJ_G0015513.1 mouse_genomes_project 3 101542874 101554340 + 4930406D18Rik processed_transcript lincRNA MGP_129S1SvImJ_T0060810.1 MGP_129S1SvImJ_G0027210.1 mouse_genomes_project 3 52809421 52833544 + Trpc4 protein_coding processed_transcript MGP_129S1SvImJ_T0060811.1 MGP_129S1SvImJ_G0027210.1 mouse_genomes_project 3 52809443 52980563 + MGP_129S1SvImJ_P0060811 Trpc4 protein_coding protein_coding MGP_129S1SvImJ_T0060812.1 MGP_129S1SvImJ_G0027210.1 mouse_genomes_project 3 52809452 52926221 + Trpc4 protein_coding retained_intron MGP_129S1SvImJ_T0060813.1 MGP_129S1SvImJ_G0027210.1 mouse_genomes_project 3 52809490 52980559 + MGP_129S1SvImJ_P0060813 Trpc4 protein_coding protein_coding MGP_129S1SvImJ_T0060814.1 MGP_129S1SvImJ_G0027210.1 mouse_genomes_project 3 52809759 52880523 + Trpc4 protein_coding retained_intron MGP_129S1SvImJ_T0060815.1 MGP_129S1SvImJ_G0027210.1 mouse_genomes_project 3 52810001 52980508 + MGP_129S1SvImJ_P0060815 Trpc4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0007487.1 MGP_129S1SvImJ_G0006137.1 mouse_genomes_project 3 19337795 19339526 - Gm43672 lincRNA lincRNA MGP_129S1SvImJ_T0010523.1 MGP_129S1SvImJ_G0008639.1 mouse_genomes_project 3 33039271 33039363 + Gm25442 miRNA miRNA MGP_129S1SvImJ_T0062340.1 MGP_129S1SvImJ_G0027572.1 mouse_genomes_project 3 95834269 95837109 - MGP_129S1SvImJ_P0062340 Tnfaip8l2 protein_coding protein_coding MGP_129S1SvImJ_T0007677.1 MGP_129S1SvImJ_G0006282.1 mouse_genomes_project 3 118089028 118091334 + Gm43202 lincRNA lincRNA MGP_129S1SvImJ_T0102452.1 MGP_129S1SvImJ_G0040286.1 mouse_genomes_project 3 292141 292569 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0001261.1 MGP_129S1SvImJ_G0001185.1 mouse_genomes_project 3 72576577 72578702 + TEC TEC MGP_129S1SvImJ_T0063360.1 MGP_129S1SvImJ_G0027806.1 mouse_genomes_project 3 117880656 117881668 + Extl2 protein_coding processed_transcript MGP_129S1SvImJ_T0063361.1 MGP_129S1SvImJ_G0027806.1 mouse_genomes_project 3 117880658 117904372 + MGP_129S1SvImJ_P0063361 Extl2 protein_coding protein_coding MGP_129S1SvImJ_T0063362.1 MGP_129S1SvImJ_G0027806.1 mouse_genomes_project 3 117880694 117896262 + Extl2 protein_coding processed_transcript MGP_129S1SvImJ_T0063363.1 MGP_129S1SvImJ_G0027806.1 mouse_genomes_project 3 117880999 117884037 + Extl2 protein_coding processed_transcript MGP_129S1SvImJ_T0007527.1 MGP_129S1SvImJ_G0006169.1 mouse_genomes_project 3 36505213 36506521 + Gm43538 lincRNA lincRNA MGP_129S1SvImJ_T0102496.1 MGP_129S1SvImJ_G0040330.1 mouse_genomes_project 3 99624502 99627895 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0063584.1 MGP_129S1SvImJ_G0027849.1 mouse_genomes_project 3 125680807 125698092 - MGP_129S1SvImJ_P0063584 Mettl14 protein_coding protein_coding MGP_129S1SvImJ_T0063585.1 MGP_129S1SvImJ_G0027849.1 mouse_genomes_project 3 125680807 125698146 - MGP_129S1SvImJ_P0063585 Mettl14 protein_coding protein_coding MGP_129S1SvImJ_T0063586.1 MGP_129S1SvImJ_G0027849.1 mouse_genomes_project 3 125680807 125698269 - MGP_129S1SvImJ_P0063586 Mettl14 protein_coding protein_coding MGP_129S1SvImJ_T0063587.1 MGP_129S1SvImJ_G0027849.1 mouse_genomes_project 3 125681982 125687007 - MGP_129S1SvImJ_P0063587 Mettl14 protein_coding protein_coding MGP_129S1SvImJ_T0063588.1 MGP_129S1SvImJ_G0027849.1 mouse_genomes_project 3 125697877 125698259 - Mettl14 protein_coding retained_intron MGP_129S1SvImJ_T0061652.1 MGP_129S1SvImJ_G0027403.1 mouse_genomes_project 3 88745718 88750829 + MGP_129S1SvImJ_P0061652 Ssr2 protein_coding protein_coding MGP_129S1SvImJ_T0061653.1 MGP_129S1SvImJ_G0027403.1 mouse_genomes_project 3 88745958 88757439 + MGP_129S1SvImJ_P0061653 Ssr2 protein_coding protein_coding MGP_129S1SvImJ_T0061654.1 MGP_129S1SvImJ_G0027403.1 mouse_genomes_project 3 88750453 88763016 + MGP_129S1SvImJ_P0061654 Ssr2 protein_coding protein_coding MGP_129S1SvImJ_T0061655.1 MGP_129S1SvImJ_G0027403.1 mouse_genomes_project 3 88750486 88762616 + MGP_129S1SvImJ_P0061655 Ssr2 protein_coding protein_coding MGP_129S1SvImJ_T0061656.1 MGP_129S1SvImJ_G0027403.1 mouse_genomes_project 3 88750512 88762630 + MGP_129S1SvImJ_P0061656 Ssr2 protein_coding protein_coding MGP_129S1SvImJ_T0061657.1 MGP_129S1SvImJ_G0027403.1 mouse_genomes_project 3 88750516 88763016 + MGP_129S1SvImJ_P0061657 Ssr2 protein_coding protein_coding MGP_129S1SvImJ_T0011557.1 MGP_129S1SvImJ_G0009673.1 mouse_genomes_project 3 32333276 32333384 + Gm27611 misc_RNA misc_RNA MGP_129S1SvImJ_T0010529.1 MGP_129S1SvImJ_G0008645.1 mouse_genomes_project 3 56413933 56414047 + Mir6377 miRNA miRNA MGP_129S1SvImJ_T0060600.1 MGP_129S1SvImJ_G0027172.1 mouse_genomes_project 3 35268471 35438645 + MGP_129S1SvImJ_P0060600 Spata5 protein_coding protein_coding MGP_129S1SvImJ_T0060601.1 MGP_129S1SvImJ_G0027172.1 mouse_genomes_project 3 35268883 35438645 + MGP_129S1SvImJ_P0060601 Spata5 protein_coding protein_coding MGP_129S1SvImJ_T0060602.1 MGP_129S1SvImJ_G0027172.1 mouse_genomes_project 3 35268897 35438645 + MGP_129S1SvImJ_P0060602 Spata5 protein_coding protein_coding MGP_129S1SvImJ_T0060603.1 MGP_129S1SvImJ_G0027172.1 mouse_genomes_project 3 35268958 35273990 + Spata5 protein_coding processed_transcript MGP_129S1SvImJ_T0060604.1 MGP_129S1SvImJ_G0027172.1 mouse_genomes_project 3 35269437 35274752 + Spata5 protein_coding processed_transcript MGP_129S1SvImJ_T0060605.1 MGP_129S1SvImJ_G0027172.1 mouse_genomes_project 3 35280660 35287762 + Spata5 protein_coding processed_transcript MGP_129S1SvImJ_T0060606.1 MGP_129S1SvImJ_G0027172.1 mouse_genomes_project 3 35285176 35287882 + Spata5 protein_coding retained_intron MGP_129S1SvImJ_T0060607.1 MGP_129S1SvImJ_G0027172.1 mouse_genomes_project 3 35300093 35387189 + Spata5 protein_coding retained_intron MGP_129S1SvImJ_T0060608.1 MGP_129S1SvImJ_G0027172.1 mouse_genomes_project 3 35350403 35438558 + Spata5 protein_coding processed_transcript MGP_129S1SvImJ_T0060609.1 MGP_129S1SvImJ_G0027172.1 mouse_genomes_project 3 35433270 35438639 + Spata5 protein_coding processed_transcript MGP_129S1SvImJ_T0098357.1 MGP_129S1SvImJ_G0036442.1 mouse_genomes_project 3 84935140 84935665 - pseudogene pseudogene MGP_129S1SvImJ_T0001410.1 MGP_129S1SvImJ_G0001333.1 mouse_genomes_project 3 160755669 160758237 + TEC TEC MGP_129S1SvImJ_T0007463.1 MGP_129S1SvImJ_G0006123.1 mouse_genomes_project 3 10526118 10527503 - Gm2464 lincRNA lincRNA MGP_129S1SvImJ_T0007627.1 MGP_129S1SvImJ_G0006238.1 mouse_genomes_project 3 92600630 92614677 + lincRNA lincRNA MGP_129S1SvImJ_T0060416.1 MGP_129S1SvImJ_G0027142.1 mouse_genomes_project 3 30349180 30360326 - MGP_129S1SvImJ_P0060416 Mrpl47 protein_coding protein_coding MGP_129S1SvImJ_T0060417.1 MGP_129S1SvImJ_G0027142.1 mouse_genomes_project 3 30351357 30355773 - Mrpl47 protein_coding processed_transcript MGP_129S1SvImJ_T0060418.1 MGP_129S1SvImJ_G0027142.1 mouse_genomes_project 3 30359279 30360822 - Mrpl47 protein_coding retained_intron MGP_129S1SvImJ_T0014055.1 MGP_129S1SvImJ_G0012144.1 mouse_genomes_project 3 50115732 50116165 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062803.1 MGP_129S1SvImJ_G0027682.1 mouse_genomes_project 3 103696801 103749439 + MGP_129S1SvImJ_P0062803 Ngf protein_coding protein_coding MGP_129S1SvImJ_T0062804.1 MGP_129S1SvImJ_G0027682.1 mouse_genomes_project 3 103696810 103738433 + MGP_129S1SvImJ_P0062804 Ngf protein_coding protein_coding MGP_129S1SvImJ_T0062805.1 MGP_129S1SvImJ_G0027682.1 mouse_genomes_project 3 103696810 103749604 + MGP_129S1SvImJ_P0062805 Ngf protein_coding protein_coding MGP_129S1SvImJ_T0062806.1 MGP_129S1SvImJ_G0027682.1 mouse_genomes_project 3 103715548 103749586 + MGP_129S1SvImJ_P0062806 Ngf protein_coding protein_coding MGP_129S1SvImJ_T0101031.1 MGP_129S1SvImJ_G0039098.1 mouse_genomes_project 3 69249586 69249717 - Gm23484 snoRNA snoRNA MGP_129S1SvImJ_T0060743.1 MGP_129S1SvImJ_G0027195.1 mouse_genomes_project 3 49857081 49864888 - MGP_129S1SvImJ_P0060743 Mgarp protein_coding protein_coding MGP_129S1SvImJ_T0060744.1 MGP_129S1SvImJ_G0027195.1 mouse_genomes_project 3 49857081 49865078 - MGP_129S1SvImJ_P0060744 Mgarp protein_coding protein_coding MGP_129S1SvImJ_T0060745.1 MGP_129S1SvImJ_G0027195.1 mouse_genomes_project 3 49857081 49864866 - MGP_129S1SvImJ_P0060745 Mgarp protein_coding protein_coding MGP_129S1SvImJ_T0060746.1 MGP_129S1SvImJ_G0027195.1 mouse_genomes_project 3 49859470 49864843 - Mgarp protein_coding retained_intron MGP_129S1SvImJ_T0060747.1 MGP_129S1SvImJ_G0027195.1 mouse_genomes_project 3 49859911 49864828 - Mgarp protein_coding processed_transcript MGP_129S1SvImJ_T0007470.1 MGP_129S1SvImJ_G0006127.1 mouse_genomes_project 3 12297777 12319902 - Gm33819 lincRNA lincRNA MGP_129S1SvImJ_T0063419.1 MGP_129S1SvImJ_G0027818.1 mouse_genomes_project 3 118671012 118740520 - MGP_129S1SvImJ_P0063419 Agl protein_coding protein_coding MGP_129S1SvImJ_T0063420.1 MGP_129S1SvImJ_G0027818.1 mouse_genomes_project 3 118673501 118739773 - MGP_129S1SvImJ_P0063420 Agl protein_coding protein_coding MGP_129S1SvImJ_T0063421.1 MGP_129S1SvImJ_G0027818.1 mouse_genomes_project 3 118674045 118710783 - MGP_129S1SvImJ_P0063421 Agl protein_coding protein_coding MGP_129S1SvImJ_T0063422.1 MGP_129S1SvImJ_G0027818.1 mouse_genomes_project 3 118679062 118740396 - MGP_129S1SvImJ_P0063422 Agl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063423.1 MGP_129S1SvImJ_G0027818.1 mouse_genomes_project 3 118685281 118740483 - MGP_129S1SvImJ_P0063423 Agl protein_coding protein_coding MGP_129S1SvImJ_T0063424.1 MGP_129S1SvImJ_G0027818.1 mouse_genomes_project 3 118709545 118711283 - MGP_129S1SvImJ_P0063424 Agl protein_coding protein_coding MGP_129S1SvImJ_T0063425.1 MGP_129S1SvImJ_G0027818.1 mouse_genomes_project 3 118720813 118740385 - Agl protein_coding retained_intron MGP_129S1SvImJ_T0063426.1 MGP_129S1SvImJ_G0027818.1 mouse_genomes_project 3 118722149 118740205 - MGP_129S1SvImJ_P0063426 Agl protein_coding protein_coding MGP_129S1SvImJ_T0061603.1 MGP_129S1SvImJ_G0027394.1 mouse_genomes_project 3 88539979 88541000 - MGP_129S1SvImJ_P0061603 protein_coding protein_coding MGP_129S1SvImJ_T0102458.1 MGP_129S1SvImJ_G0040292.1 mouse_genomes_project 3 58353137 58353402 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0064020.1 MGP_129S1SvImJ_G0027930.1 mouse_genomes_project 3 141468945 141472623 + Adh4 protein_coding processed_transcript MGP_129S1SvImJ_T0064021.1 MGP_129S1SvImJ_G0027930.1 mouse_genomes_project 3 141468966 141477499 + MGP_129S1SvImJ_P0064021 Adh4 protein_coding protein_coding MGP_129S1SvImJ_T0064022.1 MGP_129S1SvImJ_G0027930.1 mouse_genomes_project 3 141468974 141484358 + MGP_129S1SvImJ_P0064022 Adh4 protein_coding protein_coding MGP_129S1SvImJ_T0102486.1 MGP_129S1SvImJ_G0040320.1 mouse_genomes_project 3 94518219 94518405 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0061708.1 MGP_129S1SvImJ_G0027410.1 mouse_genomes_project 3 89071814 89080639 - MGP_129S1SvImJ_P0061708 Msto1 protein_coding protein_coding MGP_129S1SvImJ_T0061709.1 MGP_129S1SvImJ_G0027410.1 mouse_genomes_project 3 89075334 89078782 - Msto1 protein_coding retained_intron MGP_129S1SvImJ_T0061710.1 MGP_129S1SvImJ_G0027410.1 mouse_genomes_project 3 89076322 89080707 - MGP_129S1SvImJ_P0061710 Msto1 protein_coding protein_coding MGP_129S1SvImJ_T0061711.1 MGP_129S1SvImJ_G0027410.1 mouse_genomes_project 3 89076351 89080611 - Msto1 protein_coding retained_intron MGP_129S1SvImJ_T0061712.1 MGP_129S1SvImJ_G0027410.1 mouse_genomes_project 3 89078066 89080590 - Msto1 protein_coding retained_intron MGP_129S1SvImJ_T0062778.1 MGP_129S1SvImJ_G0027677.1 mouse_genomes_project 3 103024264 103049660 - MGP_129S1SvImJ_P0062778 Mab21l3 protein_coding protein_coding MGP_129S1SvImJ_T0062779.1 MGP_129S1SvImJ_G0027677.1 mouse_genomes_project 3 103024871 103064780 - MGP_129S1SvImJ_P0062779 Mab21l3 protein_coding protein_coding MGP_129S1SvImJ_T0014038.1 MGP_129S1SvImJ_G0012127.1 mouse_genomes_project 3 45352715 45353718 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063646.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129355184 129609304 - MGP_129S1SvImJ_P0063646 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0063647.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129355191 129436710 - MGP_129S1SvImJ_P0063647 protein_coding protein_coding MGP_129S1SvImJ_T0063648.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129355193 129357566 - protein_coding retained_intron MGP_129S1SvImJ_T0063649.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129355193 129378350 - MGP_129S1SvImJ_P0063649 protein_coding protein_coding MGP_129S1SvImJ_T0063650.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129357505 129364822 - MGP_129S1SvImJ_P0063650 protein_coding protein_coding MGP_129S1SvImJ_T0063651.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129357506 129364822 - MGP_129S1SvImJ_P0063651 protein_coding protein_coding MGP_129S1SvImJ_T0063652.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129360610 129363378 - protein_coding retained_intron MGP_129S1SvImJ_T0063653.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129368190 129370112 - protein_coding retained_intron MGP_129S1SvImJ_T0063654.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129372735 129391035 - MGP_129S1SvImJ_P0063654 protein_coding protein_coding MGP_129S1SvImJ_T0063655.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129375082 129390834 - MGP_129S1SvImJ_P0063655 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063656.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129382075 129887138 - MGP_129S1SvImJ_P0063656 protein_coding protein_coding MGP_129S1SvImJ_T0063657.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129385134 129436686 - protein_coding retained_intron MGP_129S1SvImJ_T0063658.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129393988 129985186 - MGP_129S1SvImJ_P0063658 protein_coding protein_coding MGP_129S1SvImJ_T0063659.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129395656 129887077 - MGP_129S1SvImJ_P0063659 protein_coding protein_coding MGP_129S1SvImJ_T0063660.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129456621 129465559 - protein_coding retained_intron MGP_129S1SvImJ_T0063661.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129466084 129887110 - MGP_129S1SvImJ_P0063661 protein_coding protein_coding MGP_129S1SvImJ_T0063662.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129466154 129887110 - MGP_129S1SvImJ_P0063662 protein_coding protein_coding MGP_129S1SvImJ_T0063663.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129473005 129887046 - MGP_129S1SvImJ_P0063663 protein_coding protein_coding MGP_129S1SvImJ_T0063664.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129473005 129609841 - MGP_129S1SvImJ_P0063664 protein_coding protein_coding MGP_129S1SvImJ_T0063665.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129524752 129675176 - MGP_129S1SvImJ_P0063665 protein_coding protein_coding MGP_129S1SvImJ_T0063666.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129525357 129609734 - protein_coding retained_intron MGP_129S1SvImJ_T0063667.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129528025 129887033 - MGP_129S1SvImJ_P0063667 protein_coding protein_coding MGP_129S1SvImJ_T0063668.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129607214 129609700 - protein_coding retained_intron MGP_129S1SvImJ_T0063669.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129798890 129887074 - protein_coding retained_intron MGP_129S1SvImJ_T0063670.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129800520 129984838 - protein_coding retained_intron MGP_129S1SvImJ_T0063671.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129981942 129985096 - protein_coding retained_intron MGP_129S1SvImJ_T0063672.1 MGP_129S1SvImJ_G0027859.1 mouse_genomes_project 3 129984498 129984837 - MGP_129S1SvImJ_P0063672 protein_coding protein_coding MGP_129S1SvImJ_T0101073.1 MGP_129S1SvImJ_G0039140.1 mouse_genomes_project 3 146935521 146935646 + Gm24728 snoRNA snoRNA MGP_129S1SvImJ_T0014171.1 MGP_129S1SvImJ_G0012260.1 mouse_genomes_project 3 88062814 88070669 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007520.1 MGP_129S1SvImJ_G0006164.1 mouse_genomes_project 3 35769638 35862979 + lincRNA lincRNA MGP_129S1SvImJ_T0060317.1 MGP_129S1SvImJ_G0027121.1 mouse_genomes_project 3 28092560 28095427 - MGP_129S1SvImJ_P0060317 Actrt3 protein_coding protein_coding MGP_129S1SvImJ_T0063437.1 MGP_129S1SvImJ_G0027822.1 mouse_genomes_project 3 119295870 119338190 - MGP_129S1SvImJ_P0063437 Plppr4 protein_coding protein_coding MGP_129S1SvImJ_T0063438.1 MGP_129S1SvImJ_G0027822.1 mouse_genomes_project 3 119297840 119338190 - Plppr4 protein_coding retained_intron MGP_129S1SvImJ_T0063439.1 MGP_129S1SvImJ_G0027822.1 mouse_genomes_project 3 119298642 119337562 - MGP_129S1SvImJ_P0063439 Plppr4 protein_coding protein_coding MGP_129S1SvImJ_T0102490.1 MGP_129S1SvImJ_G0040324.1 mouse_genomes_project 3 94674471 94674661 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0014340.1 MGP_129S1SvImJ_G0012429.1 mouse_genomes_project 3 138071241 138071666 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060760.1 MGP_129S1SvImJ_G0027198.1 mouse_genomes_project 3 49961628 49974072 + Rab33b protein_coding processed_transcript MGP_129S1SvImJ_T0060761.1 MGP_129S1SvImJ_G0027198.1 mouse_genomes_project 3 49961638 49962233 + MGP_129S1SvImJ_P0060761 Rab33b protein_coding protein_coding MGP_129S1SvImJ_T0060762.1 MGP_129S1SvImJ_G0027198.1 mouse_genomes_project 3 49961672 49976240 + MGP_129S1SvImJ_P0060762 Rab33b protein_coding protein_coding MGP_129S1SvImJ_T0014261.1 MGP_129S1SvImJ_G0012350.1 mouse_genomes_project 3 111543220 111543704 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013968.1 MGP_129S1SvImJ_G0012057.1 mouse_genomes_project 3 16970597 16970980 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060188.1 MGP_129S1SvImJ_G0027099.1 mouse_genomes_project 3 17263056 17346136 + MGP_129S1SvImJ_P0060188 Hltf protein_coding protein_coding MGP_129S1SvImJ_T0060189.1 MGP_129S1SvImJ_G0027099.1 mouse_genomes_project 3 17275616 17344924 + MGP_129S1SvImJ_P0060189 Hltf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060190.1 MGP_129S1SvImJ_G0027099.1 mouse_genomes_project 3 17275625 17336211 + Hltf protein_coding retained_intron MGP_129S1SvImJ_T0060191.1 MGP_129S1SvImJ_G0027099.1 mouse_genomes_project 3 17275658 17284717 + Hltf protein_coding retained_intron MGP_129S1SvImJ_T0060192.1 MGP_129S1SvImJ_G0027099.1 mouse_genomes_project 3 17276096 17346119 + MGP_129S1SvImJ_P0060192 Hltf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060193.1 MGP_129S1SvImJ_G0027099.1 mouse_genomes_project 3 17336167 17346133 + Hltf protein_coding retained_intron MGP_129S1SvImJ_T0007608.1 MGP_129S1SvImJ_G0006231.1 mouse_genomes_project 3 87233130 87237875 + Gm37855 lincRNA lincRNA MGP_129S1SvImJ_T0059995.1 MGP_129S1SvImJ_G0027044.1 mouse_genomes_project 3 954693 956796 + MGP_129S1SvImJ_P0059995 Hnrnph2 protein_coding protein_coding MGP_129S1SvImJ_T0004370.1 MGP_129S1SvImJ_G0003822.1 mouse_genomes_project 3 118538960 118540788 - Gm42893 antisense antisense MGP_129S1SvImJ_T0099773.1 MGP_129S1SvImJ_G0037840.1 mouse_genomes_project 3 97373726 97373891 + Rnu1b1 snRNA snRNA MGP_129S1SvImJ_T0007591.1 MGP_129S1SvImJ_G0006215.1 mouse_genomes_project 3 79264731 79275016 + lincRNA lincRNA MGP_129S1SvImJ_T0010574.1 MGP_129S1SvImJ_G0008690.1 mouse_genomes_project 3 140802153 140802234 - Mir6380 miRNA miRNA MGP_129S1SvImJ_T0004389.1 MGP_129S1SvImJ_G0003837.1 mouse_genomes_project 3 132412834 132417665 + Gm42650 antisense antisense MGP_129S1SvImJ_T0062214.1 MGP_129S1SvImJ_G0027553.1 mouse_genomes_project 3 95057304 95064348 + MGP_129S1SvImJ_P0062214 Celf3 protein_coding protein_coding MGP_129S1SvImJ_T0062215.1 MGP_129S1SvImJ_G0027553.1 mouse_genomes_project 3 95057840 95071170 + MGP_129S1SvImJ_P0062215 Celf3 protein_coding protein_coding MGP_129S1SvImJ_T0062216.1 MGP_129S1SvImJ_G0027553.1 mouse_genomes_project 3 95058087 95071171 + MGP_129S1SvImJ_P0062216 Celf3 protein_coding protein_coding MGP_129S1SvImJ_T0062217.1 MGP_129S1SvImJ_G0027553.1 mouse_genomes_project 3 95058116 95071174 + MGP_129S1SvImJ_P0062217 Celf3 protein_coding protein_coding MGP_129S1SvImJ_T0062218.1 MGP_129S1SvImJ_G0027553.1 mouse_genomes_project 3 95058126 95066597 + Celf3 protein_coding retained_intron MGP_129S1SvImJ_T0062219.1 MGP_129S1SvImJ_G0027553.1 mouse_genomes_project 3 95061584 95066240 + Celf3 protein_coding processed_transcript MGP_129S1SvImJ_T0062220.1 MGP_129S1SvImJ_G0027553.1 mouse_genomes_project 3 95061751 95071170 + Celf3 protein_coding processed_transcript MGP_129S1SvImJ_T0062221.1 MGP_129S1SvImJ_G0027553.1 mouse_genomes_project 3 95063356 95071170 + Celf3 protein_coding retained_intron MGP_129S1SvImJ_T0062222.1 MGP_129S1SvImJ_G0027553.1 mouse_genomes_project 3 95063393 95065968 + MGP_129S1SvImJ_P0062222 Celf3 protein_coding protein_coding MGP_129S1SvImJ_T0062223.1 MGP_129S1SvImJ_G0027553.1 mouse_genomes_project 3 95063400 95066313 + MGP_129S1SvImJ_P0062223 Celf3 protein_coding protein_coding MGP_129S1SvImJ_T0062224.1 MGP_129S1SvImJ_G0027553.1 mouse_genomes_project 3 95064306 95071159 + Celf3 protein_coding retained_intron MGP_129S1SvImJ_T0062225.1 MGP_129S1SvImJ_G0027553.1 mouse_genomes_project 3 95065674 95067640 + Celf3 protein_coding retained_intron MGP_129S1SvImJ_T0062226.1 MGP_129S1SvImJ_G0027553.1 mouse_genomes_project 3 95066230 95068589 + Celf3 protein_coding retained_intron MGP_129S1SvImJ_T0061333.1 MGP_129S1SvImJ_G0027330.1 mouse_genomes_project 3 82712050 82725060 - MGP_129S1SvImJ_P0061333 Lrat protein_coding protein_coding MGP_129S1SvImJ_T0014001.1 MGP_129S1SvImJ_G0012090.1 mouse_genomes_project 3 33609448 33610437 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007698.1 MGP_129S1SvImJ_G0006296.1 mouse_genomes_project 3 127202061 127303442 + Gm42825 lincRNA lincRNA MGP_129S1SvImJ_T0063323.1 MGP_129S1SvImJ_G0027799.1 mouse_genomes_project 3 115349018 115372008 - MGP_129S1SvImJ_P0063323 Amy1 protein_coding protein_coding MGP_129S1SvImJ_T0063324.1 MGP_129S1SvImJ_G0027799.1 mouse_genomes_project 3 115349261 115368940 - MGP_129S1SvImJ_P0063324 Amy1 protein_coding protein_coding MGP_129S1SvImJ_T0063325.1 MGP_129S1SvImJ_G0027799.1 mouse_genomes_project 3 115349457 115355532 - Amy1 protein_coding retained_intron MGP_129S1SvImJ_T0063326.1 MGP_129S1SvImJ_G0027799.1 mouse_genomes_project 3 115356203 115368450 - MGP_129S1SvImJ_P0063326 Amy1 protein_coding protein_coding MGP_129S1SvImJ_T0063327.1 MGP_129S1SvImJ_G0027799.1 mouse_genomes_project 3 115358500 115402816 - MGP_129S1SvImJ_P0063327 Amy1 protein_coding protein_coding MGP_129S1SvImJ_T0001139.1 MGP_129S1SvImJ_G0001065.1 mouse_genomes_project 3 17642747 17642993 + TEC TEC MGP_129S1SvImJ_T0062312.1 MGP_129S1SvImJ_G0027566.1 mouse_genomes_project 3 95742705 95799117 - MGP_129S1SvImJ_P0062312 Pip5k1a protein_coding protein_coding MGP_129S1SvImJ_T0062313.1 MGP_129S1SvImJ_G0027566.1 mouse_genomes_project 3 95742718 95799172 - MGP_129S1SvImJ_P0062313 Pip5k1a protein_coding protein_coding MGP_129S1SvImJ_T0062314.1 MGP_129S1SvImJ_G0027566.1 mouse_genomes_project 3 95742720 95799098 - MGP_129S1SvImJ_P0062314 Pip5k1a protein_coding protein_coding MGP_129S1SvImJ_T0062315.1 MGP_129S1SvImJ_G0027566.1 mouse_genomes_project 3 95742744 95799021 - MGP_129S1SvImJ_P0062315 Pip5k1a protein_coding protein_coding MGP_129S1SvImJ_T0062316.1 MGP_129S1SvImJ_G0027566.1 mouse_genomes_project 3 95754996 95765049 - Pip5k1a protein_coding processed_transcript MGP_129S1SvImJ_T0062317.1 MGP_129S1SvImJ_G0027566.1 mouse_genomes_project 3 95764637 95769757 - Pip5k1a protein_coding retained_intron MGP_129S1SvImJ_T0062318.1 MGP_129S1SvImJ_G0027566.1 mouse_genomes_project 3 95787209 95799065 - Pip5k1a protein_coding processed_transcript MGP_129S1SvImJ_T0001366.1 MGP_129S1SvImJ_G0001289.1 mouse_genomes_project 3 133296290 133298429 + TEC TEC MGP_129S1SvImJ_T0001371.1 MGP_129S1SvImJ_G0001294.1 mouse_genomes_project 3 133795040 133797590 - TEC TEC MGP_129S1SvImJ_T0063452.1 MGP_129S1SvImJ_G0027826.1 mouse_genomes_project 3 121829387 121899831 - MGP_129S1SvImJ_P0063452 Ptbp2 protein_coding protein_coding MGP_129S1SvImJ_T0063453.1 MGP_129S1SvImJ_G0027826.1 mouse_genomes_project 3 121829387 121899415 - MGP_129S1SvImJ_P0063453 Ptbp2 protein_coding protein_coding MGP_129S1SvImJ_T0063454.1 MGP_129S1SvImJ_G0027826.1 mouse_genomes_project 3 121830965 121899261 - MGP_129S1SvImJ_P0063454 Ptbp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063455.1 MGP_129S1SvImJ_G0027826.1 mouse_genomes_project 3 121830990 121836797 - MGP_129S1SvImJ_P0063455 Ptbp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063456.1 MGP_129S1SvImJ_G0027826.1 mouse_genomes_project 3 121831029 121855623 - Ptbp2 protein_coding retained_intron MGP_129S1SvImJ_T0063457.1 MGP_129S1SvImJ_G0027826.1 mouse_genomes_project 3 121831454 121835044 - Ptbp2 protein_coding retained_intron MGP_129S1SvImJ_T0063458.1 MGP_129S1SvImJ_G0027826.1 mouse_genomes_project 3 121834763 121855254 - MGP_129S1SvImJ_P0063458 Ptbp2 protein_coding protein_coding MGP_129S1SvImJ_T0063459.1 MGP_129S1SvImJ_G0027826.1 mouse_genomes_project 3 121853465 121857512 - Ptbp2 protein_coding retained_intron MGP_129S1SvImJ_T0063460.1 MGP_129S1SvImJ_G0027826.1 mouse_genomes_project 3 121861378 121899313 - MGP_129S1SvImJ_P0063460 Ptbp2 protein_coding protein_coding MGP_129S1SvImJ_T0063461.1 MGP_129S1SvImJ_G0027826.1 mouse_genomes_project 3 121862654 121900491 - Ptbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0063462.1 MGP_129S1SvImJ_G0027826.1 mouse_genomes_project 3 121877149 121900493 - Ptbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0063463.1 MGP_129S1SvImJ_G0027826.1 mouse_genomes_project 3 121877154 121899718 - Ptbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0063464.1 MGP_129S1SvImJ_G0027826.1 mouse_genomes_project 3 121877156 121899334 - MGP_129S1SvImJ_P0063464 Ptbp2 protein_coding protein_coding MGP_129S1SvImJ_T0062447.1 MGP_129S1SvImJ_G0027591.1 mouse_genomes_project 3 96441919 96453589 - MGP_129S1SvImJ_P0062447 Adamtsl4 protein_coding protein_coding MGP_129S1SvImJ_T0062448.1 MGP_129S1SvImJ_G0027591.1 mouse_genomes_project 3 96441922 96453530 - MGP_129S1SvImJ_P0062448 Adamtsl4 protein_coding protein_coding MGP_129S1SvImJ_T0062449.1 MGP_129S1SvImJ_G0027591.1 mouse_genomes_project 3 96442468 96442870 - Adamtsl4 protein_coding processed_transcript MGP_129S1SvImJ_T0062450.1 MGP_129S1SvImJ_G0027591.1 mouse_genomes_project 3 96444739 96445808 - Adamtsl4 protein_coding processed_transcript MGP_129S1SvImJ_T0062451.1 MGP_129S1SvImJ_G0027591.1 mouse_genomes_project 3 96450258 96453537 - MGP_129S1SvImJ_P0062451 Adamtsl4 protein_coding protein_coding MGP_129S1SvImJ_T0014172.1 MGP_129S1SvImJ_G0012261.1 mouse_genomes_project 3 88102259 88102680 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014004.1 MGP_129S1SvImJ_G0012093.1 mouse_genomes_project 3 34180121 34180620 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014338.1 MGP_129S1SvImJ_G0012427.1 mouse_genomes_project 3 137986922 137987511 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007767.1 MGP_129S1SvImJ_G0006357.1 mouse_genomes_project 3 150932399 150944145 + Gm36831 lincRNA lincRNA MGP_129S1SvImJ_T0061419.1 MGP_129S1SvImJ_G0027353.1 mouse_genomes_project 3 86172245 86176914 - MGP_129S1SvImJ_P0061419 Rps3a1 protein_coding protein_coding MGP_129S1SvImJ_T0001209.1 MGP_129S1SvImJ_G0001135.1 mouse_genomes_project 3 49969593 49972797 + TEC TEC MGP_129S1SvImJ_T0014177.1 MGP_129S1SvImJ_G0012266.1 mouse_genomes_project 3 90987183 90987336 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014272.1 MGP_129S1SvImJ_G0012361.1 mouse_genomes_project 3 114769458 114771713 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010578.1 MGP_129S1SvImJ_G0008694.1 mouse_genomes_project 3 149908426 149908512 - Gm22901 miRNA miRNA MGP_129S1SvImJ_T0063378.1 MGP_129S1SvImJ_G0027810.1 mouse_genomes_project 3 118390438 118409722 - MGP_129S1SvImJ_P0063378 Rtca protein_coding protein_coding MGP_129S1SvImJ_T0063379.1 MGP_129S1SvImJ_G0027810.1 mouse_genomes_project 3 118390715 118397479 - Rtca protein_coding retained_intron MGP_129S1SvImJ_T0063380.1 MGP_129S1SvImJ_G0027810.1 mouse_genomes_project 3 118395664 118409538 - MGP_129S1SvImJ_P0063380 Rtca protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063381.1 MGP_129S1SvImJ_G0027810.1 mouse_genomes_project 3 118397204 118409579 - MGP_129S1SvImJ_P0063381 Rtca protein_coding protein_coding MGP_129S1SvImJ_T0063382.1 MGP_129S1SvImJ_G0027810.1 mouse_genomes_project 3 118401059 118409647 - MGP_129S1SvImJ_P0063382 Rtca protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064041.1 MGP_129S1SvImJ_G0027934.1 mouse_genomes_project 3 141812979 141985461 + MGP_129S1SvImJ_P0064041 Tspan5 protein_coding protein_coding MGP_129S1SvImJ_T0064042.1 MGP_129S1SvImJ_G0027934.1 mouse_genomes_project 3 141813089 141982206 + MGP_129S1SvImJ_P0064042 Tspan5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064043.1 MGP_129S1SvImJ_G0027934.1 mouse_genomes_project 3 141813289 141974575 + MGP_129S1SvImJ_P0064043 Tspan5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064044.1 MGP_129S1SvImJ_G0027934.1 mouse_genomes_project 3 141813553 141972207 + MGP_129S1SvImJ_P0064044 Tspan5 protein_coding protein_coding MGP_129S1SvImJ_T0064045.1 MGP_129S1SvImJ_G0027934.1 mouse_genomes_project 3 141849414 141980275 + MGP_129S1SvImJ_P0064045 Tspan5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064046.1 MGP_129S1SvImJ_G0027934.1 mouse_genomes_project 3 141915984 141982213 + MGP_129S1SvImJ_P0064046 Tspan5 protein_coding protein_coding MGP_129S1SvImJ_T0101015.1 MGP_129S1SvImJ_G0039082.1 mouse_genomes_project 3 31597541 31597673 - Gm23175 snoRNA snoRNA MGP_129S1SvImJ_T0007754.1 MGP_129S1SvImJ_G0006346.1 mouse_genomes_project 3 147004034 147092529 + Gm42705 lincRNA lincRNA MGP_129S1SvImJ_T0062415.1 MGP_129S1SvImJ_G0027584.1 mouse_genomes_project 3 96164938 96224541 + Arnt protein_coding retained_intron MGP_129S1SvImJ_T0062416.1 MGP_129S1SvImJ_G0027584.1 mouse_genomes_project 3 96164938 96228486 + MGP_129S1SvImJ_P0062416 Arnt protein_coding protein_coding MGP_129S1SvImJ_T0062417.1 MGP_129S1SvImJ_G0027584.1 mouse_genomes_project 3 96164940 96230153 + MGP_129S1SvImJ_P0062417 Arnt protein_coding protein_coding MGP_129S1SvImJ_T0062418.1 MGP_129S1SvImJ_G0027584.1 mouse_genomes_project 3 96164954 96230150 + MGP_129S1SvImJ_P0062418 Arnt protein_coding protein_coding MGP_129S1SvImJ_T0062419.1 MGP_129S1SvImJ_G0027584.1 mouse_genomes_project 3 96164978 96191239 + MGP_129S1SvImJ_P0062419 Arnt protein_coding protein_coding MGP_129S1SvImJ_T0062420.1 MGP_129S1SvImJ_G0027584.1 mouse_genomes_project 3 96164978 96228490 + MGP_129S1SvImJ_P0062420 Arnt protein_coding protein_coding MGP_129S1SvImJ_T0062421.1 MGP_129S1SvImJ_G0027584.1 mouse_genomes_project 3 96165069 96225609 + Arnt protein_coding retained_intron MGP_129S1SvImJ_T0062422.1 MGP_129S1SvImJ_G0027584.1 mouse_genomes_project 3 96196704 96228486 + Arnt protein_coding retained_intron MGP_129S1SvImJ_T0062423.1 MGP_129S1SvImJ_G0027584.1 mouse_genomes_project 3 96203442 96209541 + Arnt protein_coding retained_intron MGP_129S1SvImJ_T0062424.1 MGP_129S1SvImJ_G0027584.1 mouse_genomes_project 3 96205426 96220230 + MGP_129S1SvImJ_P0062424 Arnt protein_coding protein_coding MGP_129S1SvImJ_T0062425.1 MGP_129S1SvImJ_G0027584.1 mouse_genomes_project 3 96222323 96223325 + Arnt protein_coding retained_intron MGP_129S1SvImJ_T0101008.1 MGP_129S1SvImJ_G0039075.1 mouse_genomes_project 3 7960810 7960928 - Gm22795 snoRNA snoRNA MGP_129S1SvImJ_T0013969.1 MGP_129S1SvImJ_G0012058.1 mouse_genomes_project 3 17130874 17131434 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007588.1 MGP_129S1SvImJ_G0006214.1 mouse_genomes_project 3 78952714 78953715 + 6430573P05Rik lincRNA lincRNA MGP_129S1SvImJ_T0007589.1 MGP_129S1SvImJ_G0006214.1 mouse_genomes_project 3 78952933 78955386 + 6430573P05Rik lincRNA lincRNA MGP_129S1SvImJ_T0007590.1 MGP_129S1SvImJ_G0006214.1 mouse_genomes_project 3 78953269 78954346 + 6430573P05Rik lincRNA lincRNA MGP_129S1SvImJ_T0014087.1 MGP_129S1SvImJ_G0012176.1 mouse_genomes_project 3 59716908 59717478 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101052.1 MGP_129S1SvImJ_G0039119.1 mouse_genomes_project 3 101428600 101428677 + Gm25802 snoRNA snoRNA MGP_129S1SvImJ_T0007772.1 MGP_129S1SvImJ_G0006361.1 mouse_genomes_project 3 152921478 153090794 - Gm30382 lincRNA lincRNA MGP_129S1SvImJ_T0007773.1 MGP_129S1SvImJ_G0006361.1 mouse_genomes_project 3 152921936 152962913 - Gm30382 lincRNA lincRNA MGP_129S1SvImJ_T0007775.1 MGP_129S1SvImJ_G0006361.1 mouse_genomes_project 3 152951113 153090819 - Gm30382 lincRNA lincRNA MGP_129S1SvImJ_T0062766.1 MGP_129S1SvImJ_G0027673.1 mouse_genomes_project 3 102186983 102262195 - MGP_129S1SvImJ_P0062766 Ptgfrn protein_coding protein_coding MGP_129S1SvImJ_T0062767.1 MGP_129S1SvImJ_G0027673.1 mouse_genomes_project 3 102209074 102222893 - Ptgfrn protein_coding processed_transcript MGP_129S1SvImJ_T0062768.1 MGP_129S1SvImJ_G0027673.1 mouse_genomes_project 3 102223379 102228165 - Ptgfrn protein_coding retained_intron MGP_129S1SvImJ_T0007593.1 MGP_129S1SvImJ_G0006217.1 mouse_genomes_project 3 80017685 80075546 - Gm37971 lincRNA lincRNA MGP_129S1SvImJ_T0060540.1 MGP_129S1SvImJ_G0027163.1 mouse_genomes_project 3 34431329 34506650 - MGP_129S1SvImJ_P0060540 Trpc3 protein_coding protein_coding MGP_129S1SvImJ_T0060541.1 MGP_129S1SvImJ_G0027163.1 mouse_genomes_project 3 34431410 34432212 - Trpc3 protein_coding processed_transcript MGP_129S1SvImJ_T0060542.1 MGP_129S1SvImJ_G0027163.1 mouse_genomes_project 3 34431410 34432190 - Trpc3 protein_coding processed_transcript MGP_129S1SvImJ_T0060543.1 MGP_129S1SvImJ_G0027163.1 mouse_genomes_project 3 34448927 34451176 - Trpc3 protein_coding retained_intron MGP_129S1SvImJ_T0060544.1 MGP_129S1SvImJ_G0027163.1 mouse_genomes_project 3 34480008 34506650 - Trpc3 protein_coding retained_intron MGP_129S1SvImJ_T0001233.1 MGP_129S1SvImJ_G0001157.1 mouse_genomes_project 3 52108962 52110138 + TEC TEC MGP_129S1SvImJ_T0062007.1 MGP_129S1SvImJ_G0027458.1 mouse_genomes_project 3 90527709 90533722 - MGP_129S1SvImJ_P0062007 Creb3l4 protein_coding protein_coding MGP_129S1SvImJ_T0062008.1 MGP_129S1SvImJ_G0027458.1 mouse_genomes_project 3 90527779 90533353 - MGP_129S1SvImJ_P0062008 Creb3l4 protein_coding protein_coding MGP_129S1SvImJ_T0001244.1 MGP_129S1SvImJ_G0001168.1 mouse_genomes_project 3 56491822 56493119 - TEC TEC MGP_129S1SvImJ_T0004305.1 MGP_129S1SvImJ_G0003785.1 mouse_genomes_project 3 95635248 95638225 - B230398E01Rik antisense antisense MGP_129S1SvImJ_T0063786.1 MGP_129S1SvImJ_G0027882.1 mouse_genomes_project 3 133444800 133458411 - MGP_129S1SvImJ_P0063786 Ostc protein_coding protein_coding MGP_129S1SvImJ_T0063787.1 MGP_129S1SvImJ_G0027882.1 mouse_genomes_project 3 133444807 133445508 - Ostc protein_coding retained_intron MGP_129S1SvImJ_T0063788.1 MGP_129S1SvImJ_G0027882.1 mouse_genomes_project 3 133456683 133458383 - Ostc protein_coding retained_intron MGP_129S1SvImJ_T0010539.1 MGP_129S1SvImJ_G0008655.1 mouse_genomes_project 3 88363938 88364027 + Mir9-1 miRNA miRNA MGP_129S1SvImJ_T0061789.1 MGP_129S1SvImJ_G0027422.1 mouse_genomes_project 3 89409547 89414362 - MGP_129S1SvImJ_P0061789 Mtx1 protein_coding protein_coding MGP_129S1SvImJ_T0061790.1 MGP_129S1SvImJ_G0027422.1 mouse_genomes_project 3 89409549 89414899 - MGP_129S1SvImJ_P0061790 Mtx1 protein_coding protein_coding MGP_129S1SvImJ_T0061791.1 MGP_129S1SvImJ_G0027422.1 mouse_genomes_project 3 89409554 89410805 - MGP_129S1SvImJ_P0061791 Mtx1 protein_coding protein_coding MGP_129S1SvImJ_T0061792.1 MGP_129S1SvImJ_G0027422.1 mouse_genomes_project 3 89409555 89410133 - Mtx1 protein_coding retained_intron MGP_129S1SvImJ_T0061793.1 MGP_129S1SvImJ_G0027422.1 mouse_genomes_project 3 89409555 89410563 - Mtx1 protein_coding processed_transcript MGP_129S1SvImJ_T0061794.1 MGP_129S1SvImJ_G0027422.1 mouse_genomes_project 3 89409555 89414826 - MGP_129S1SvImJ_P0061794 Mtx1 protein_coding protein_coding MGP_129S1SvImJ_T0061795.1 MGP_129S1SvImJ_G0027422.1 mouse_genomes_project 3 89409557 89410590 - MGP_129S1SvImJ_P0061795 Mtx1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061796.1 MGP_129S1SvImJ_G0027422.1 mouse_genomes_project 3 89409560 89414376 - MGP_129S1SvImJ_P0061796 Mtx1 protein_coding protein_coding MGP_129S1SvImJ_T0061797.1 MGP_129S1SvImJ_G0027422.1 mouse_genomes_project 3 89409681 89414309 - MGP_129S1SvImJ_P0061797 Mtx1 protein_coding protein_coding MGP_129S1SvImJ_T0061798.1 MGP_129S1SvImJ_G0027422.1 mouse_genomes_project 3 89409796 89414381 - MGP_129S1SvImJ_P0061798 Mtx1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061799.1 MGP_129S1SvImJ_G0027422.1 mouse_genomes_project 3 89409824 89428281 - MGP_129S1SvImJ_P0061799 Mtx1 protein_coding protein_coding MGP_129S1SvImJ_T0061800.1 MGP_129S1SvImJ_G0027422.1 mouse_genomes_project 3 89409882 89411305 - Mtx1 protein_coding retained_intron MGP_129S1SvImJ_T0061801.1 MGP_129S1SvImJ_G0027422.1 mouse_genomes_project 3 89410114 89411192 - Mtx1 protein_coding retained_intron MGP_129S1SvImJ_T0061802.1 MGP_129S1SvImJ_G0027422.1 mouse_genomes_project 3 89410213 89414331 - Mtx1 protein_coding retained_intron MGP_129S1SvImJ_T0061803.1 MGP_129S1SvImJ_G0027422.1 mouse_genomes_project 3 89410500 89414354 - MGP_129S1SvImJ_P0061803 Mtx1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061804.1 MGP_129S1SvImJ_G0027422.1 mouse_genomes_project 3 89410728 89414346 - Mtx1 protein_coding retained_intron MGP_129S1SvImJ_T0061805.1 MGP_129S1SvImJ_G0027422.1 mouse_genomes_project 3 89411144 89414295 - MGP_129S1SvImJ_P0061805 Mtx1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061812.1 MGP_129S1SvImJ_G0027422.1 mouse_genomes_project 3 89425337 89428317 - Mtx1 protein_coding processed_transcript MGP_129S1SvImJ_T0098898.1 MGP_129S1SvImJ_G0036976.1 mouse_genomes_project 3 105160697 105162788 + Gm43065 sense_intronic sense_intronic MGP_129S1SvImJ_T0064096.1 MGP_129S1SvImJ_G0027946.1 mouse_genomes_project 3 145910250 145956977 + MGP_129S1SvImJ_P0064096 Kyat3 protein_coding protein_coding MGP_129S1SvImJ_T0064097.1 MGP_129S1SvImJ_G0027946.1 mouse_genomes_project 3 145910279 145959320 + MGP_129S1SvImJ_P0064097 Kyat3 protein_coding protein_coding MGP_129S1SvImJ_T0064098.1 MGP_129S1SvImJ_G0027946.1 mouse_genomes_project 3 145910285 145937733 + MGP_129S1SvImJ_P0064098 Kyat3 protein_coding protein_coding MGP_129S1SvImJ_T0064099.1 MGP_129S1SvImJ_G0027946.1 mouse_genomes_project 3 145910293 145956788 + MGP_129S1SvImJ_P0064099 Kyat3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064100.1 MGP_129S1SvImJ_G0027946.1 mouse_genomes_project 3 145934650 145942833 + Kyat3 protein_coding processed_transcript MGP_129S1SvImJ_T0064101.1 MGP_129S1SvImJ_G0027946.1 mouse_genomes_project 3 145939935 145941896 + Kyat3 protein_coding retained_intron MGP_129S1SvImJ_T0064102.1 MGP_129S1SvImJ_G0027946.1 mouse_genomes_project 3 145950084 145953415 + Kyat3 protein_coding retained_intron MGP_129S1SvImJ_T0064103.1 MGP_129S1SvImJ_G0027946.1 mouse_genomes_project 3 145950983 145956786 + Kyat3 protein_coding processed_transcript MGP_129S1SvImJ_T0102476.1 MGP_129S1SvImJ_G0040310.1 mouse_genomes_project 3 91358078 91365180 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0063697.1 MGP_129S1SvImJ_G0027866.1 mouse_genomes_project 3 130318414 130350787 - MGP_129S1SvImJ_P0063697 Ap1ar protein_coding protein_coding MGP_129S1SvImJ_T0063698.1 MGP_129S1SvImJ_G0027866.1 mouse_genomes_project 3 130318419 130350775 - MGP_129S1SvImJ_P0063698 Ap1ar protein_coding protein_coding MGP_129S1SvImJ_T0063699.1 MGP_129S1SvImJ_G0027866.1 mouse_genomes_project 3 130318673 130320312 - Ap1ar protein_coding retained_intron MGP_129S1SvImJ_T0063700.1 MGP_129S1SvImJ_G0027866.1 mouse_genomes_project 3 130323659 130324294 - Ap1ar protein_coding retained_intron MGP_129S1SvImJ_T0063701.1 MGP_129S1SvImJ_G0027866.1 mouse_genomes_project 3 130324868 130330075 - Ap1ar protein_coding retained_intron MGP_129S1SvImJ_T0063702.1 MGP_129S1SvImJ_G0027866.1 mouse_genomes_project 3 130328101 130329764 - Ap1ar protein_coding retained_intron MGP_129S1SvImJ_T0063703.1 MGP_129S1SvImJ_G0027866.1 mouse_genomes_project 3 130332128 130339279 - Ap1ar protein_coding retained_intron MGP_129S1SvImJ_T0063704.1 MGP_129S1SvImJ_G0027866.1 mouse_genomes_project 3 130333185 130350495 - Ap1ar protein_coding retained_intron MGP_129S1SvImJ_T0063705.1 MGP_129S1SvImJ_G0027866.1 mouse_genomes_project 3 130333186 130335125 - Ap1ar protein_coding retained_intron MGP_129S1SvImJ_T0063706.1 MGP_129S1SvImJ_G0027866.1 mouse_genomes_project 3 130333221 130350520 - MGP_129S1SvImJ_P0063706 Ap1ar protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0014296.1 MGP_129S1SvImJ_G0012385.1 mouse_genomes_project 3 123567368 123567789 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062593.1 MGP_129S1SvImJ_G0027627.1 mouse_genomes_project 3 97532363 97553253 + MGP_129S1SvImJ_P0062593 Itga10 protein_coding protein_coding MGP_129S1SvImJ_T0062594.1 MGP_129S1SvImJ_G0027627.1 mouse_genomes_project 3 97532363 97553247 + MGP_129S1SvImJ_P0062594 Itga10 protein_coding protein_coding MGP_129S1SvImJ_T0062595.1 MGP_129S1SvImJ_G0027627.1 mouse_genomes_project 3 97544179 97549817 + Itga10 protein_coding retained_intron MGP_129S1SvImJ_T0101077.1 MGP_129S1SvImJ_G0039144.1 mouse_genomes_project 3 157788607 157788730 + Gm25757 snoRNA snoRNA MGP_129S1SvImJ_T0064480.1 MGP_129S1SvImJ_G0028011.1 mouse_genomes_project 3 161672370 161686626 + MGP_129S1SvImJ_P0064480 Zranb2 protein_coding protein_coding MGP_129S1SvImJ_T0064481.1 MGP_129S1SvImJ_G0028011.1 mouse_genomes_project 3 161672569 161686552 + MGP_129S1SvImJ_P0064481 Zranb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064482.1 MGP_129S1SvImJ_G0028011.1 mouse_genomes_project 3 161672569 161686552 + MGP_129S1SvImJ_P0064482 Zranb2 protein_coding protein_coding MGP_129S1SvImJ_T0064483.1 MGP_129S1SvImJ_G0028011.1 mouse_genomes_project 3 161672586 161681422 + MGP_129S1SvImJ_P0064483 Zranb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064484.1 MGP_129S1SvImJ_G0028011.1 mouse_genomes_project 3 161672598 161686592 + MGP_129S1SvImJ_P0064484 Zranb2 protein_coding protein_coding MGP_129S1SvImJ_T0064485.1 MGP_129S1SvImJ_G0028011.1 mouse_genomes_project 3 161672635 161685139 + Zranb2 protein_coding retained_intron MGP_129S1SvImJ_T0064486.1 MGP_129S1SvImJ_G0028011.1 mouse_genomes_project 3 161677270 161679986 + Zranb2 protein_coding retained_intron MGP_129S1SvImJ_T0064487.1 MGP_129S1SvImJ_G0028011.1 mouse_genomes_project 3 161678871 161685019 + MGP_129S1SvImJ_P0064487 Zranb2 protein_coding protein_coding MGP_129S1SvImJ_T0101004.1 MGP_129S1SvImJ_G0039071.1 mouse_genomes_project 3 1327295 1327428 - Gm22944 snoRNA snoRNA MGP_129S1SvImJ_T0013958.1 MGP_129S1SvImJ_G0012047.1 mouse_genomes_project 3 14435988 14437327 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014027.1 MGP_129S1SvImJ_G0012116.1 mouse_genomes_project 3 40630110 40630597 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004429.1 MGP_129S1SvImJ_G0003866.1 mouse_genomes_project 3 161665725 161672301 - Gm43159 antisense antisense MGP_129S1SvImJ_T0064142.1 MGP_129S1SvImJ_G0027953.1 mouse_genomes_project 3 148124946 148191101 - MGP_129S1SvImJ_P0064142 protein_coding protein_coding MGP_129S1SvImJ_T0064143.1 MGP_129S1SvImJ_G0027953.1 mouse_genomes_project 3 148132317 148135494 - MGP_129S1SvImJ_P0064143 protein_coding protein_coding MGP_129S1SvImJ_T0064144.1 MGP_129S1SvImJ_G0027953.1 mouse_genomes_project 3 148156663 148191096 - protein_coding retained_intron MGP_129S1SvImJ_T0099778.1 MGP_129S1SvImJ_G0037845.1 mouse_genomes_project 3 105909297 105909379 - Gm26091 snRNA snRNA MGP_129S1SvImJ_T0099806.1 MGP_129S1SvImJ_G0037873.1 mouse_genomes_project 3 164046279 164046386 - Gm23941 snRNA snRNA MGP_129S1SvImJ_T0004254.1 MGP_129S1SvImJ_G0003747.1 mouse_genomes_project 3 51617581 51620752 - Gm42901 antisense antisense MGP_129S1SvImJ_T0014117.1 MGP_129S1SvImJ_G0012206.1 mouse_genomes_project 3 68587567 68587826 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061236.1 MGP_129S1SvImJ_G0027309.1 mouse_genomes_project 3 75584483 76301412 + MGP_129S1SvImJ_P0061236 Fstl5 protein_coding protein_coding MGP_129S1SvImJ_T0061237.1 MGP_129S1SvImJ_G0027309.1 mouse_genomes_project 3 75584772 76120692 + Fstl5 protein_coding processed_transcript MGP_129S1SvImJ_T0061238.1 MGP_129S1SvImJ_G0027309.1 mouse_genomes_project 3 75585796 76300030 + MGP_129S1SvImJ_P0061238 Fstl5 protein_coding protein_coding MGP_129S1SvImJ_T0061239.1 MGP_129S1SvImJ_G0027309.1 mouse_genomes_project 3 76163496 76168611 + Fstl5 protein_coding retained_intron MGP_129S1SvImJ_T0061240.1 MGP_129S1SvImJ_G0027309.1 mouse_genomes_project 3 76172905 76298944 + MGP_129S1SvImJ_P0061240 Fstl5 protein_coding protein_coding MGP_129S1SvImJ_T0062661.1 MGP_129S1SvImJ_G0027640.1 mouse_genomes_project 3 98343777 98344740 - MGP_129S1SvImJ_P0062661 Olfr1402 protein_coding protein_coding MGP_129S1SvImJ_T0014290.1 MGP_129S1SvImJ_G0012379.1 mouse_genomes_project 3 119883965 119884407 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001422.1 MGP_129S1SvImJ_G0001345.1 mouse_genomes_project 3 162653410 162654435 + TEC TEC MGP_129S1SvImJ_T0014073.1 MGP_129S1SvImJ_G0012162.1 mouse_genomes_project 3 56744532 56744766 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060194.1 MGP_129S1SvImJ_G0027100.1 mouse_genomes_project 3 17349258 17382281 - MGP_129S1SvImJ_P0060194 Gyg protein_coding protein_coding MGP_129S1SvImJ_T0060195.1 MGP_129S1SvImJ_G0027100.1 mouse_genomes_project 3 17349261 17382060 - MGP_129S1SvImJ_P0060195 Gyg protein_coding protein_coding MGP_129S1SvImJ_T0060196.1 MGP_129S1SvImJ_G0027100.1 mouse_genomes_project 3 17349321 17382033 - MGP_129S1SvImJ_P0060196 Gyg protein_coding protein_coding MGP_129S1SvImJ_T0060197.1 MGP_129S1SvImJ_G0027100.1 mouse_genomes_project 3 17349730 17350718 - Gyg protein_coding retained_intron MGP_129S1SvImJ_T0061034.1 MGP_129S1SvImJ_G0027260.1 mouse_genomes_project 3 61503201 61587082 - MGP_129S1SvImJ_P0061034 Gpr149 protein_coding protein_coding MGP_129S1SvImJ_T0061035.1 MGP_129S1SvImJ_G0027260.1 mouse_genomes_project 3 61574652 61584686 - Gpr149 protein_coding retained_intron MGP_129S1SvImJ_T0064318.1 MGP_129S1SvImJ_G0027988.1 mouse_genomes_project 3 156062901 156089231 + MGP_129S1SvImJ_P0064318 Fubp1 protein_coding protein_coding MGP_129S1SvImJ_T0064319.1 MGP_129S1SvImJ_G0027988.1 mouse_genomes_project 3 156062952 156072821 + MGP_129S1SvImJ_P0064319 Fubp1 protein_coding protein_coding MGP_129S1SvImJ_T0064320.1 MGP_129S1SvImJ_G0027988.1 mouse_genomes_project 3 156062961 156085153 + MGP_129S1SvImJ_P0064320 Fubp1 protein_coding protein_coding MGP_129S1SvImJ_T0064321.1 MGP_129S1SvImJ_G0027988.1 mouse_genomes_project 3 156062971 156077220 + MGP_129S1SvImJ_P0064321 Fubp1 protein_coding protein_coding MGP_129S1SvImJ_T0064322.1 MGP_129S1SvImJ_G0027988.1 mouse_genomes_project 3 156062977 156085152 + MGP_129S1SvImJ_P0064322 Fubp1 protein_coding protein_coding MGP_129S1SvImJ_T0064323.1 MGP_129S1SvImJ_G0027988.1 mouse_genomes_project 3 156062993 156072037 + MGP_129S1SvImJ_P0064323 Fubp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064324.1 MGP_129S1SvImJ_G0027988.1 mouse_genomes_project 3 156062998 156088156 + MGP_129S1SvImJ_P0064324 Fubp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064325.1 MGP_129S1SvImJ_G0027988.1 mouse_genomes_project 3 156062998 156085152 + MGP_129S1SvImJ_P0064325 Fubp1 protein_coding protein_coding MGP_129S1SvImJ_T0064326.1 MGP_129S1SvImJ_G0027988.1 mouse_genomes_project 3 156063000 156089231 + MGP_129S1SvImJ_P0064326 Fubp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064327.1 MGP_129S1SvImJ_G0027988.1 mouse_genomes_project 3 156069740 156070820 + Fubp1 protein_coding retained_intron MGP_129S1SvImJ_T0064328.1 MGP_129S1SvImJ_G0027988.1 mouse_genomes_project 3 156073684 156076457 + MGP_129S1SvImJ_P0064328 Fubp1 protein_coding protein_coding MGP_129S1SvImJ_T0064329.1 MGP_129S1SvImJ_G0027988.1 mouse_genomes_project 3 156074206 156075303 + Fubp1 protein_coding retained_intron MGP_129S1SvImJ_T0064330.1 MGP_129S1SvImJ_G0027988.1 mouse_genomes_project 3 156075620 156085153 + MGP_129S1SvImJ_P0064330 Fubp1 protein_coding protein_coding MGP_129S1SvImJ_T0064331.1 MGP_129S1SvImJ_G0027988.1 mouse_genomes_project 3 156075633 156085170 + MGP_129S1SvImJ_P0064331 Fubp1 protein_coding protein_coding MGP_129S1SvImJ_T0064332.1 MGP_129S1SvImJ_G0027988.1 mouse_genomes_project 3 156075643 156088236 + MGP_129S1SvImJ_P0064332 Fubp1 protein_coding protein_coding MGP_129S1SvImJ_T0064333.1 MGP_129S1SvImJ_G0027988.1 mouse_genomes_project 3 156077081 156087800 + Fubp1 protein_coding retained_intron MGP_129S1SvImJ_T0064334.1 MGP_129S1SvImJ_G0027988.1 mouse_genomes_project 3 156078226 156080586 + Fubp1 protein_coding retained_intron MGP_129S1SvImJ_T0064335.1 MGP_129S1SvImJ_G0027988.1 mouse_genomes_project 3 156079661 156083680 + Fubp1 protein_coding retained_intron MGP_129S1SvImJ_T0064336.1 MGP_129S1SvImJ_G0027988.1 mouse_genomes_project 3 156080179 156084889 + Fubp1 protein_coding retained_intron MGP_129S1SvImJ_T0061292.1 MGP_129S1SvImJ_G0027320.1 mouse_genomes_project 3 80601627 80674459 - MGP_129S1SvImJ_P0061292 Glrb protein_coding protein_coding MGP_129S1SvImJ_T0061293.1 MGP_129S1SvImJ_G0027320.1 mouse_genomes_project 3 80601628 80674413 - MGP_129S1SvImJ_P0061293 Glrb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061294.1 MGP_129S1SvImJ_G0027320.1 mouse_genomes_project 3 80602989 80672890 - MGP_129S1SvImJ_P0061294 Glrb protein_coding protein_coding MGP_129S1SvImJ_T0061295.1 MGP_129S1SvImJ_G0027320.1 mouse_genomes_project 3 80613490 80674327 - MGP_129S1SvImJ_P0061295 Glrb protein_coding protein_coding MGP_129S1SvImJ_T0061296.1 MGP_129S1SvImJ_G0027320.1 mouse_genomes_project 3 80613497 80615129 - Glrb protein_coding retained_intron MGP_129S1SvImJ_T0061297.1 MGP_129S1SvImJ_G0027320.1 mouse_genomes_project 3 80621443 80674388 - MGP_129S1SvImJ_P0061297 Glrb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0001234.1 MGP_129S1SvImJ_G0001158.1 mouse_genomes_project 3 52353713 52355315 + TEC TEC MGP_129S1SvImJ_T0007450.1 MGP_129S1SvImJ_G0006114.1 mouse_genomes_project 3 2282929 2285268 - 4930555M17Rik lincRNA lincRNA MGP_129S1SvImJ_T0062409.1 MGP_129S1SvImJ_G0027583.1 mouse_genomes_project 3 96047777 96083976 - Setdb1 protein_coding retained_intron MGP_129S1SvImJ_T0062410.1 MGP_129S1SvImJ_G0027583.1 mouse_genomes_project 3 96047777 96083977 - MGP_129S1SvImJ_P0062410 Setdb1 protein_coding protein_coding MGP_129S1SvImJ_T0062411.1 MGP_129S1SvImJ_G0027583.1 mouse_genomes_project 3 96047777 96084023 - MGP_129S1SvImJ_P0062411 Setdb1 protein_coding protein_coding MGP_129S1SvImJ_T0062412.1 MGP_129S1SvImJ_G0027583.1 mouse_genomes_project 3 96047777 96084021 - MGP_129S1SvImJ_P0062412 Setdb1 protein_coding protein_coding MGP_129S1SvImJ_T0062413.1 MGP_129S1SvImJ_G0027583.1 mouse_genomes_project 3 96063326 96083977 - Setdb1 protein_coding retained_intron MGP_129S1SvImJ_T0062414.1 MGP_129S1SvImJ_G0027583.1 mouse_genomes_project 3 96082187 96083910 - Setdb1 protein_coding retained_intron MGP_129S1SvImJ_T0014362.1 MGP_129S1SvImJ_G0012451.1 mouse_genomes_project 3 143773578 143773831 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063295.1 MGP_129S1SvImJ_G0027792.1 mouse_genomes_project 3 110672040 110717637 + MGP_129S1SvImJ_P0063295 Slc25a54 protein_coding protein_coding MGP_129S1SvImJ_T0063296.1 MGP_129S1SvImJ_G0027792.1 mouse_genomes_project 3 110672070 110717532 + MGP_129S1SvImJ_P0063296 Slc25a54 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0001218.1 MGP_129S1SvImJ_G0001143.1 mouse_genomes_project 3 50369303 50372147 - TEC TEC MGP_129S1SvImJ_T0014385.1 MGP_129S1SvImJ_G0012474.1 mouse_genomes_project 3 155992446 155993117 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010556.1 MGP_129S1SvImJ_G0008672.1 mouse_genomes_project 3 110128093 110128167 - Gm22860 miRNA miRNA MGP_129S1SvImJ_T0061368.1 MGP_129S1SvImJ_G0027341.1 mouse_genomes_project 3 84073283 84074311 + MGP_129S1SvImJ_P0061368 Gm6525 protein_coding protein_coding MGP_129S1SvImJ_T0061344.1 MGP_129S1SvImJ_G0027335.1 mouse_genomes_project 3 82960067 83201515 + MGP_129S1SvImJ_P0061344 Dchs2 protein_coding protein_coding MGP_129S1SvImJ_T0014186.1 MGP_129S1SvImJ_G0012275.1 mouse_genomes_project 3 93122346 93122974 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063750.1 MGP_129S1SvImJ_G0027875.1 mouse_genomes_project 3 132519617 132534469 + MGP_129S1SvImJ_P0063750 Cfi protein_coding protein_coding MGP_129S1SvImJ_T0063751.1 MGP_129S1SvImJ_G0027875.1 mouse_genomes_project 3 132520444 132563450 + MGP_129S1SvImJ_P0063751 Cfi protein_coding protein_coding MGP_129S1SvImJ_T0062116.1 MGP_129S1SvImJ_G0027490.1 mouse_genomes_project 3 92792771 92794078 + MGP_129S1SvImJ_P0062116 Sprr2e protein_coding protein_coding MGP_129S1SvImJ_T0099792.1 MGP_129S1SvImJ_G0037859.1 mouse_genomes_project 3 135725485 135725592 + Gm23196 snRNA snRNA MGP_129S1SvImJ_T0014180.1 MGP_129S1SvImJ_G0012269.1 mouse_genomes_project 3 91109161 91109993 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063025.1 MGP_129S1SvImJ_G0027725.1 mouse_genomes_project 3 107348510 107355095 + Wdr77 protein_coding retained_intron MGP_129S1SvImJ_T0063026.1 MGP_129S1SvImJ_G0027725.1 mouse_genomes_project 3 107348516 107359040 + MGP_129S1SvImJ_P0063026 Wdr77 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063027.1 MGP_129S1SvImJ_G0027725.1 mouse_genomes_project 3 107348586 107358755 + MGP_129S1SvImJ_P0063027 Wdr77 protein_coding protein_coding MGP_129S1SvImJ_T0063028.1 MGP_129S1SvImJ_G0027725.1 mouse_genomes_project 3 107353451 107354554 + Wdr77 protein_coding retained_intron MGP_129S1SvImJ_T0013928.1 MGP_129S1SvImJ_G0012017.1 mouse_genomes_project 3 5940571 5941016 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014246.1 MGP_129S1SvImJ_G0012335.1 mouse_genomes_project 3 107430678 107432048 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063446.1 MGP_129S1SvImJ_G0027825.1 mouse_genomes_project 3 120597632 121523836 + MGP_129S1SvImJ_P0063446 Dpyd protein_coding protein_coding MGP_129S1SvImJ_T0063447.1 MGP_129S1SvImJ_G0027825.1 mouse_genomes_project 3 120597633 120853615 + Dpyd protein_coding retained_intron MGP_129S1SvImJ_T0063448.1 MGP_129S1SvImJ_G0027825.1 mouse_genomes_project 3 120597680 120835553 + Dpyd protein_coding retained_intron MGP_129S1SvImJ_T0063449.1 MGP_129S1SvImJ_G0027825.1 mouse_genomes_project 3 120597683 120703078 + MGP_129S1SvImJ_P0063449 Dpyd protein_coding protein_coding MGP_129S1SvImJ_T0063450.1 MGP_129S1SvImJ_G0027825.1 mouse_genomes_project 3 120597689 120598656 + Dpyd protein_coding retained_intron MGP_129S1SvImJ_T0063451.1 MGP_129S1SvImJ_G0027825.1 mouse_genomes_project 3 120865723 120963038 + Dpyd protein_coding retained_intron MGP_129S1SvImJ_T0007792.1 MGP_129S1SvImJ_G0006373.1 mouse_genomes_project 3 160114437 160120110 - Gm42947 lincRNA lincRNA MGP_129S1SvImJ_T0063722.1 MGP_129S1SvImJ_G0027870.1 mouse_genomes_project 3 132193008 132297133 + MGP_129S1SvImJ_P0063722 Elovl6 protein_coding protein_coding MGP_129S1SvImJ_T0063723.1 MGP_129S1SvImJ_G0027870.1 mouse_genomes_project 3 132213029 132290631 + MGP_129S1SvImJ_P0063723 Elovl6 protein_coding protein_coding MGP_129S1SvImJ_T0007597.1 MGP_129S1SvImJ_G0006221.1 mouse_genomes_project 3 82570639 82575861 + Gm30043 lincRNA lincRNA MGP_129S1SvImJ_T0098751.1 MGP_129S1SvImJ_G0036836.1 mouse_genomes_project 3 88876956 88877083 + Gm25820 scaRNA scaRNA MGP_129S1SvImJ_T0064402.1 MGP_129S1SvImJ_G0027997.1 mouse_genomes_project 3 157804546 157815241 + MGP_129S1SvImJ_P0064402 Asb17 protein_coding protein_coding MGP_129S1SvImJ_T0064403.1 MGP_129S1SvImJ_G0027997.1 mouse_genomes_project 3 157804603 157813746 + MGP_129S1SvImJ_P0064403 Asb17 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063088.1 MGP_129S1SvImJ_G0027742.1 mouse_genomes_project 3 108689353 108699794 - MGP_129S1SvImJ_P0063088 Cym protein_coding protein_coding MGP_129S1SvImJ_T0098885.1 MGP_129S1SvImJ_G0036963.1 mouse_genomes_project 3 102584298 102586487 + Gm42939 sense_intronic sense_intronic MGP_129S1SvImJ_T0014220.1 MGP_129S1SvImJ_G0012309.1 mouse_genomes_project 3 100561034 100561268 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001134.1 MGP_129S1SvImJ_G0001060.1 mouse_genomes_project 3 7774839 7776522 - TEC TEC MGP_129S1SvImJ_T0062110.1 MGP_129S1SvImJ_G0027484.1 mouse_genomes_project 3 92427063 92444385 + MGP_129S1SvImJ_P0062110 Pglyrp3 protein_coding protein_coding MGP_129S1SvImJ_T0064383.1 MGP_129S1SvImJ_G0027993.1 mouse_genomes_project 3 156328834 156552325 - MGP_129S1SvImJ_P0064383 Ak5 protein_coding protein_coding MGP_129S1SvImJ_T0064384.1 MGP_129S1SvImJ_G0027993.1 mouse_genomes_project 3 156329882 156393000 - MGP_129S1SvImJ_P0064384 Ak5 protein_coding protein_coding MGP_129S1SvImJ_T0064385.1 MGP_129S1SvImJ_G0027993.1 mouse_genomes_project 3 156338683 156344459 - Ak5 protein_coding retained_intron MGP_129S1SvImJ_T0062073.1 MGP_129S1SvImJ_G0027470.1 mouse_genomes_project 3 90854000 90855375 + MGP_129S1SvImJ_P0062073 S100a14 protein_coding protein_coding MGP_129S1SvImJ_T0062074.1 MGP_129S1SvImJ_G0027470.1 mouse_genomes_project 3 90854011 90855982 + MGP_129S1SvImJ_P0062074 S100a14 protein_coding protein_coding MGP_129S1SvImJ_T0062075.1 MGP_129S1SvImJ_G0027470.1 mouse_genomes_project 3 90854014 90855982 + MGP_129S1SvImJ_P0062075 S100a14 protein_coding protein_coding MGP_129S1SvImJ_T0062076.1 MGP_129S1SvImJ_G0027470.1 mouse_genomes_project 3 90854016 90855971 + S100a14 protein_coding retained_intron MGP_129S1SvImJ_T0062375.1 MGP_129S1SvImJ_G0027577.1 mouse_genomes_project 3 95944457 95949135 - MGP_129S1SvImJ_P0062375 Gm128 protein_coding protein_coding MGP_129S1SvImJ_T0062376.1 MGP_129S1SvImJ_G0027577.1 mouse_genomes_project 3 95944644 95949135 - MGP_129S1SvImJ_P0062376 Gm128 protein_coding protein_coding MGP_129S1SvImJ_T0062573.1 MGP_129S1SvImJ_G0027620.1 mouse_genomes_project 3 97455916 97459602 + MGP_129S1SvImJ_P0062573 Gm16253 protein_coding protein_coding MGP_129S1SvImJ_T0062827.1 MGP_129S1SvImJ_G0027687.1 mouse_genomes_project 3 104237166 104249832 + MGP_129S1SvImJ_P0062827 Sike1 protein_coding protein_coding MGP_129S1SvImJ_T0062828.1 MGP_129S1SvImJ_G0027687.1 mouse_genomes_project 3 104237188 104240663 + Sike1 protein_coding retained_intron MGP_129S1SvImJ_T0062829.1 MGP_129S1SvImJ_G0027687.1 mouse_genomes_project 3 104237253 104243569 + MGP_129S1SvImJ_P0062829 Sike1 protein_coding protein_coding MGP_129S1SvImJ_T0062830.1 MGP_129S1SvImJ_G0027687.1 mouse_genomes_project 3 104237468 104238763 + Sike1 protein_coding retained_intron MGP_129S1SvImJ_T0062831.1 MGP_129S1SvImJ_G0027687.1 mouse_genomes_project 3 104237584 104243211 + MGP_129S1SvImJ_P0062831 Sike1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062832.1 MGP_129S1SvImJ_G0027687.1 mouse_genomes_project 3 104238140 104240650 + Sike1 protein_coding retained_intron MGP_129S1SvImJ_T0102500.1 MGP_129S1SvImJ_G0040334.1 mouse_genomes_project 3 107574839 107576183 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0064475.1 MGP_129S1SvImJ_G0028010.1 mouse_genomes_project 3 160661030 161443754 + MGP_129S1SvImJ_P0064475 Negr1 protein_coding protein_coding MGP_129S1SvImJ_T0064476.1 MGP_129S1SvImJ_G0028010.1 mouse_genomes_project 3 160661195 161284899 + MGP_129S1SvImJ_P0064476 Negr1 protein_coding protein_coding MGP_129S1SvImJ_T0064477.1 MGP_129S1SvImJ_G0028010.1 mouse_genomes_project 3 160661205 161314311 + MGP_129S1SvImJ_P0064477 Negr1 protein_coding protein_coding MGP_129S1SvImJ_T0064478.1 MGP_129S1SvImJ_G0028010.1 mouse_genomes_project 3 160661382 160666976 + Negr1 protein_coding retained_intron MGP_129S1SvImJ_T0064479.1 MGP_129S1SvImJ_G0028010.1 mouse_genomes_project 3 160661386 161126564 + MGP_129S1SvImJ_P0064479 Negr1 protein_coding protein_coding MGP_129S1SvImJ_T0001326.1 MGP_129S1SvImJ_G0001250.1 mouse_genomes_project 3 123996661 123997734 - TEC TEC MGP_129S1SvImJ_T0064001.1 MGP_129S1SvImJ_G0027925.1 mouse_genomes_project 3 141190305 141211602 + MGP_129S1SvImJ_P0064001 Trmt10a protein_coding protein_coding MGP_129S1SvImJ_T0064002.1 MGP_129S1SvImJ_G0027925.1 mouse_genomes_project 3 141190326 141204812 + Trmt10a protein_coding retained_intron MGP_129S1SvImJ_T0064003.1 MGP_129S1SvImJ_G0027925.1 mouse_genomes_project 3 141190374 141211599 + MGP_129S1SvImJ_P0064003 Trmt10a protein_coding protein_coding MGP_129S1SvImJ_T0064004.1 MGP_129S1SvImJ_G0027925.1 mouse_genomes_project 3 141190656 141197350 + MGP_129S1SvImJ_P0064004 Trmt10a protein_coding protein_coding MGP_129S1SvImJ_T0064005.1 MGP_129S1SvImJ_G0027925.1 mouse_genomes_project 3 141190718 141197452 + MGP_129S1SvImJ_P0064005 Trmt10a protein_coding protein_coding MGP_129S1SvImJ_T0064006.1 MGP_129S1SvImJ_G0027925.1 mouse_genomes_project 3 141190728 141205937 + MGP_129S1SvImJ_P0064006 Trmt10a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0064007.1 MGP_129S1SvImJ_G0027925.1 mouse_genomes_project 3 141190767 141199469 + MGP_129S1SvImJ_P0064007 Trmt10a protein_coding protein_coding MGP_129S1SvImJ_T0001237.1 MGP_129S1SvImJ_G0001161.1 mouse_genomes_project 3 54253244 54255262 + TEC TEC MGP_129S1SvImJ_T0014129.1 MGP_129S1SvImJ_G0012218.1 mouse_genomes_project 3 71211691 71212655 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102463.1 MGP_129S1SvImJ_G0040297.1 mouse_genomes_project 3 63842304 63843183 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0014384.1 MGP_129S1SvImJ_G0012473.1 mouse_genomes_project 3 155909051 155909607 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014271.1 MGP_129S1SvImJ_G0012360.1 mouse_genomes_project 3 114341122 114341515 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101020.1 MGP_129S1SvImJ_G0039087.1 mouse_genomes_project 3 44496919 44497051 + Gm26081 snoRNA snoRNA MGP_129S1SvImJ_T0062558.1 MGP_129S1SvImJ_G0027612.1 mouse_genomes_project 3 97027917 97030538 + MGP_129S1SvImJ_P0062558 Hist2h2be protein_coding protein_coding MGP_129S1SvImJ_T0014330.1 MGP_129S1SvImJ_G0012419.1 mouse_genomes_project 3 135815825 135816252 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007556.1 MGP_129S1SvImJ_G0006189.1 mouse_genomes_project 3 52334741 52350507 + lincRNA lincRNA MGP_129S1SvImJ_T0007461.1 MGP_129S1SvImJ_G0006121.1 mouse_genomes_project 3 6969155 6972340 - Gm38335 lincRNA lincRNA MGP_129S1SvImJ_T0062787.1 MGP_129S1SvImJ_G0027679.1 mouse_genomes_project 3 103226668 103231326 + MGP_129S1SvImJ_P0062787 Nhlh2 protein_coding protein_coding MGP_129S1SvImJ_T0062788.1 MGP_129S1SvImJ_G0027679.1 mouse_genomes_project 3 103226738 103232102 + MGP_129S1SvImJ_P0062788 Nhlh2 protein_coding protein_coding MGP_129S1SvImJ_T0062789.1 MGP_129S1SvImJ_G0027679.1 mouse_genomes_project 3 103226747 103231099 + MGP_129S1SvImJ_P0062789 Nhlh2 protein_coding protein_coding MGP_129S1SvImJ_T0063552.1 MGP_129S1SvImJ_G0027843.1 mouse_genomes_project 3 125207996 125214329 - MGP_129S1SvImJ_P0063552 Gm10959 protein_coding protein_coding MGP_129S1SvImJ_T0063226.1 MGP_129S1SvImJ_G0027778.1 mouse_genomes_project 3 110008258 110095140 - MGP_129S1SvImJ_P0063226 5330417C22Rik protein_coding protein_coding MGP_129S1SvImJ_T0063227.1 MGP_129S1SvImJ_G0027778.1 mouse_genomes_project 3 110010694 110094885 - MGP_129S1SvImJ_P0063227 5330417C22Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063228.1 MGP_129S1SvImJ_G0027778.1 mouse_genomes_project 3 110010800 110094888 - MGP_129S1SvImJ_P0063228 5330417C22Rik protein_coding protein_coding MGP_129S1SvImJ_T0063229.1 MGP_129S1SvImJ_G0027778.1 mouse_genomes_project 3 110016132 110017561 - 5330417C22Rik protein_coding retained_intron MGP_129S1SvImJ_T0063230.1 MGP_129S1SvImJ_G0027778.1 mouse_genomes_project 3 110020348 110022723 - 5330417C22Rik protein_coding retained_intron MGP_129S1SvImJ_T0063231.1 MGP_129S1SvImJ_G0027778.1 mouse_genomes_project 3 110044544 110094820 - 5330417C22Rik protein_coding retained_intron MGP_129S1SvImJ_T0007639.1 MGP_129S1SvImJ_G0006250.1 mouse_genomes_project 3 97316363 97350969 + lincRNA lincRNA MGP_129S1SvImJ_T0060253.1 MGP_129S1SvImJ_G0027114.1 mouse_genomes_project 3 25316776 25328350 + Pld1 protein_coding processed_transcript MGP_129S1SvImJ_T0060254.1 MGP_129S1SvImJ_G0027114.1 mouse_genomes_project 3 25316777 25400585 + MGP_129S1SvImJ_P0060254 Pld1 protein_coding protein_coding MGP_129S1SvImJ_T0060255.1 MGP_129S1SvImJ_G0027114.1 mouse_genomes_project 3 25391398 25506090 + MGP_129S1SvImJ_P0060255 Pld1 protein_coding protein_coding MGP_129S1SvImJ_T0060256.1 MGP_129S1SvImJ_G0027114.1 mouse_genomes_project 3 25403159 25506214 + MGP_129S1SvImJ_P0060256 Pld1 protein_coding protein_coding MGP_129S1SvImJ_T0060257.1 MGP_129S1SvImJ_G0027114.1 mouse_genomes_project 3 25414121 25423213 + Pld1 protein_coding processed_transcript MGP_129S1SvImJ_T0060258.1 MGP_129S1SvImJ_G0027114.1 mouse_genomes_project 3 25440714 25455418 + Pld1 protein_coding retained_intron MGP_129S1SvImJ_T0060259.1 MGP_129S1SvImJ_G0027114.1 mouse_genomes_project 3 25447909 25451226 + Pld1 protein_coding retained_intron MGP_129S1SvImJ_T0060260.1 MGP_129S1SvImJ_G0027114.1 mouse_genomes_project 3 25481810 25503647 + MGP_129S1SvImJ_P0060260 Pld1 protein_coding protein_coding MGP_129S1SvImJ_T0061698.1 MGP_129S1SvImJ_G0027407.1 mouse_genomes_project 3 88907154 88922637 + MGP_129S1SvImJ_P0061698 Rit1 protein_coding protein_coding MGP_129S1SvImJ_T0061699.1 MGP_129S1SvImJ_G0027407.1 mouse_genomes_project 3 88907225 88917954 + MGP_129S1SvImJ_P0061699 Rit1 protein_coding protein_coding MGP_129S1SvImJ_T0061700.1 MGP_129S1SvImJ_G0027407.1 mouse_genomes_project 3 88907230 88908357 + Rit1 protein_coding retained_intron MGP_129S1SvImJ_T0061701.1 MGP_129S1SvImJ_G0027407.1 mouse_genomes_project 3 88907243 88922623 + MGP_129S1SvImJ_P0061701 Rit1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061702.1 MGP_129S1SvImJ_G0027407.1 mouse_genomes_project 3 88907247 88922631 + Rit1 protein_coding retained_intron MGP_129S1SvImJ_T0061703.1 MGP_129S1SvImJ_G0027407.1 mouse_genomes_project 3 88907248 88921133 + MGP_129S1SvImJ_P0061703 Rit1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061704.1 MGP_129S1SvImJ_G0027407.1 mouse_genomes_project 3 88907260 88917904 + Rit1 protein_coding retained_intron MGP_129S1SvImJ_T0018001.1 MGP_129S1SvImJ_G0015510.1 mouse_genomes_project 3 94926540 94930868 - Gm36070 processed_transcript lincRNA MGP_129S1SvImJ_T0018002.1 MGP_129S1SvImJ_G0015510.1 mouse_genomes_project 3 94927359 94929238 - Gm36070 processed_transcript retained_intron MGP_129S1SvImJ_T0061425.1 MGP_129S1SvImJ_G0027355.1 mouse_genomes_project 3 86601677 86604564 - MGP_129S1SvImJ_P0061425 Mab21l2 protein_coding protein_coding MGP_129S1SvImJ_T0061426.1 MGP_129S1SvImJ_G0027355.1 mouse_genomes_project 3 86602330 86604910 - Mab21l2 protein_coding processed_pseudogene MGP_129S1SvImJ_T0013916.1 MGP_129S1SvImJ_G0012005.1 mouse_genomes_project 3 3245361 3246343 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064106.1 MGP_129S1SvImJ_G0027948.1 mouse_genomes_project 3 146003714 146100229 - MGP_129S1SvImJ_P0064106 Pkn2 protein_coding protein_coding MGP_129S1SvImJ_T0064107.1 MGP_129S1SvImJ_G0027948.1 mouse_genomes_project 3 146006523 146100140 - MGP_129S1SvImJ_P0064107 Pkn2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064108.1 MGP_129S1SvImJ_G0027948.1 mouse_genomes_project 3 146006625 146099883 - MGP_129S1SvImJ_P0064108 Pkn2 protein_coding protein_coding MGP_129S1SvImJ_T0064109.1 MGP_129S1SvImJ_G0027948.1 mouse_genomes_project 3 146006625 146099883 - MGP_129S1SvImJ_P0064109 Pkn2 protein_coding protein_coding MGP_129S1SvImJ_T0064110.1 MGP_129S1SvImJ_G0027948.1 mouse_genomes_project 3 146012835 146100145 - Pkn2 protein_coding processed_transcript MGP_129S1SvImJ_T0064111.1 MGP_129S1SvImJ_G0027948.1 mouse_genomes_project 3 146012917 146015987 - Pkn2 protein_coding retained_intron MGP_129S1SvImJ_T0064112.1 MGP_129S1SvImJ_G0027948.1 mouse_genomes_project 3 146017565 146100215 - Pkn2 protein_coding processed_transcript MGP_129S1SvImJ_T0064113.1 MGP_129S1SvImJ_G0027948.1 mouse_genomes_project 3 146024119 146036076 - MGP_129S1SvImJ_P0064113 Pkn2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064114.1 MGP_129S1SvImJ_G0027948.1 mouse_genomes_project 3 146025236 146027060 - Pkn2 protein_coding retained_intron MGP_129S1SvImJ_T0064115.1 MGP_129S1SvImJ_G0027948.1 mouse_genomes_project 3 146026030 146044606 - MGP_129S1SvImJ_P0064115 Pkn2 protein_coding protein_coding MGP_129S1SvImJ_T0064116.1 MGP_129S1SvImJ_G0027948.1 mouse_genomes_project 3 146035786 146044569 - Pkn2 protein_coding retained_intron MGP_129S1SvImJ_T0064117.1 MGP_129S1SvImJ_G0027948.1 mouse_genomes_project 3 146045540 146100208 - Pkn2 protein_coding retained_intron MGP_129S1SvImJ_T0064118.1 MGP_129S1SvImJ_G0027948.1 mouse_genomes_project 3 146071169 146073962 - Pkn2 protein_coding retained_intron MGP_129S1SvImJ_T0007460.1 MGP_129S1SvImJ_G0006120.1 mouse_genomes_project 3 6684287 6714508 + Gm16337 lincRNA lincRNA MGP_129S1SvImJ_T0063297.1 MGP_129S1SvImJ_G0027793.1 mouse_genomes_project 3 110724100 110766046 + MGP_129S1SvImJ_P0063297 Slc25a24 protein_coding protein_coding MGP_129S1SvImJ_T0063298.1 MGP_129S1SvImJ_G0027793.1 mouse_genomes_project 3 110724113 110756125 + MGP_129S1SvImJ_P0063298 Slc25a24 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0014006.1 MGP_129S1SvImJ_G0012095.1 mouse_genomes_project 3 34341575 34342274 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101017.1 MGP_129S1SvImJ_G0039084.1 mouse_genomes_project 3 35865357 35865488 - Gm22899 snoRNA snoRNA MGP_129S1SvImJ_T0001320.1 MGP_129S1SvImJ_G0001244.1 mouse_genomes_project 3 123340090 123342712 + TEC TEC MGP_129S1SvImJ_T0098358.1 MGP_129S1SvImJ_G0036443.1 mouse_genomes_project 3 89563961 89565231 + pseudogene pseudogene MGP_129S1SvImJ_T0098890.1 MGP_129S1SvImJ_G0036968.1 mouse_genomes_project 3 103358986 103361868 + 4632404M16Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0061123.1 MGP_129S1SvImJ_G0027280.1 mouse_genomes_project 3 66586697 66633122 + MGP_129S1SvImJ_P0061123 Gfm1 protein_coding protein_coding MGP_129S1SvImJ_T0061124.1 MGP_129S1SvImJ_G0027280.1 mouse_genomes_project 3 66586717 66615407 + Gfm1 protein_coding processed_transcript MGP_129S1SvImJ_T0061125.1 MGP_129S1SvImJ_G0027280.1 mouse_genomes_project 3 66586840 66614652 + MGP_129S1SvImJ_P0061125 Gfm1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0061126.1 MGP_129S1SvImJ_G0027280.1 mouse_genomes_project 3 66613080 66631397 + Gfm1 protein_coding retained_intron MGP_129S1SvImJ_T0101040.1 MGP_129S1SvImJ_G0039107.1 mouse_genomes_project 3 86174841 86174912 - Rnu73b snoRNA snoRNA MGP_129S1SvImJ_T0060225.1 MGP_129S1SvImJ_G0027107.1 mouse_genomes_project 3 23935856 24286929 + MGP_129S1SvImJ_P0060225 Spata16 protein_coding protein_coding MGP_129S1SvImJ_T0060226.1 MGP_129S1SvImJ_G0027107.1 mouse_genomes_project 3 23935886 24237972 + MGP_129S1SvImJ_P0060226 Spata16 protein_coding protein_coding MGP_129S1SvImJ_T0014137.1 MGP_129S1SvImJ_G0012226.1 mouse_genomes_project 3 74268181 74268805 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063322.1 MGP_129S1SvImJ_G0027798.1 mouse_genomes_project 3 115093532 115094378 - protein_coding retained_intron MGP_129S1SvImJ_T0060203.1 MGP_129S1SvImJ_G0027103.1 mouse_genomes_project 3 17555941 17610751 - MGP_129S1SvImJ_P0060203 Agtr1b protein_coding protein_coding MGP_129S1SvImJ_T0060204.1 MGP_129S1SvImJ_G0027103.1 mouse_genomes_project 3 17556365 17610698 - MGP_129S1SvImJ_P0060204 Agtr1b protein_coding protein_coding MGP_129S1SvImJ_T0001235.1 MGP_129S1SvImJ_G0001159.1 mouse_genomes_project 3 54058804 54060936 + TEC TEC MGP_129S1SvImJ_T0007736.1 MGP_129S1SvImJ_G0006331.1 mouse_genomes_project 3 143916999 143917376 - lincRNA lincRNA MGP_129S1SvImJ_T0018035.1 MGP_129S1SvImJ_G0015522.1 mouse_genomes_project 3 124546438 124553074 - processed_transcript retained_intron MGP_129S1SvImJ_T0060879.1 MGP_129S1SvImJ_G0027222.1 mouse_genomes_project 3 53911443 53937763 + MGP_129S1SvImJ_P0060879 Sohlh2 protein_coding protein_coding MGP_129S1SvImJ_T0099787.1 MGP_129S1SvImJ_G0037854.1 mouse_genomes_project 3 126748015 126748125 + Gm22575 snRNA snRNA MGP_129S1SvImJ_T0061867.1 MGP_129S1SvImJ_G0027434.1 mouse_genomes_project 3 89576266 89581974 + MGP_129S1SvImJ_P0061867 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0007579.1 MGP_129S1SvImJ_G0006207.1 mouse_genomes_project 3 72470003 72609845 + lincRNA lincRNA MGP_129S1SvImJ_T0007580.1 MGP_129S1SvImJ_G0006207.1 mouse_genomes_project 3 72470038 73005193 + lincRNA lincRNA MGP_129S1SvImJ_T0004266.1 MGP_129S1SvImJ_G0003756.1 mouse_genomes_project 3 60316652 60319995 - Gm37696 antisense antisense MGP_129S1SvImJ_T0014317.1 MGP_129S1SvImJ_G0012406.1 mouse_genomes_project 3 131559153 131560473 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062901.1 MGP_129S1SvImJ_G0027698.1 mouse_genomes_project 3 105091514 105097969 - Dclre1b protein_coding retained_intron MGP_129S1SvImJ_T0062902.1 MGP_129S1SvImJ_G0027698.1 mouse_genomes_project 3 105091532 105096824 - MGP_129S1SvImJ_P0062902 Dclre1b protein_coding protein_coding MGP_129S1SvImJ_T0062903.1 MGP_129S1SvImJ_G0027698.1 mouse_genomes_project 3 105091597 105097732 - MGP_129S1SvImJ_P0062903 Dclre1b protein_coding protein_coding MGP_129S1SvImJ_T0062904.1 MGP_129S1SvImJ_G0027698.1 mouse_genomes_project 3 105092228 105096281 - Dclre1b protein_coding retained_intron MGP_129S1SvImJ_T0062905.1 MGP_129S1SvImJ_G0027698.1 mouse_genomes_project 3 105092656 105097836 - MGP_129S1SvImJ_P0062905 Dclre1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062906.1 MGP_129S1SvImJ_G0027698.1 mouse_genomes_project 3 105094562 105098033 - MGP_129S1SvImJ_P0062906 Dclre1b protein_coding protein_coding MGP_129S1SvImJ_T0061019.1 MGP_129S1SvImJ_G0027255.1 mouse_genomes_project 3 59966955 59973145 + MGP_129S1SvImJ_P0061019 P2ry1 protein_coding protein_coding MGP_129S1SvImJ_T0061020.1 MGP_129S1SvImJ_G0027255.1 mouse_genomes_project 3 59966955 59973142 + MGP_129S1SvImJ_P0061020 P2ry1 protein_coding protein_coding MGP_129S1SvImJ_T0061021.1 MGP_129S1SvImJ_G0027255.1 mouse_genomes_project 3 59966959 59969160 + MGP_129S1SvImJ_P0061021 P2ry1 protein_coding protein_coding MGP_129S1SvImJ_T0007700.1 MGP_129S1SvImJ_G0006298.1 mouse_genomes_project 3 130379927 130383608 + lincRNA lincRNA MGP_129S1SvImJ_T0060009.1 MGP_129S1SvImJ_G0027049.1 mouse_genomes_project 3 4182292 4258656 + MGP_129S1SvImJ_P0060009 Pkia protein_coding protein_coding MGP_129S1SvImJ_T0060010.1 MGP_129S1SvImJ_G0027049.1 mouse_genomes_project 3 4182293 4265228 + MGP_129S1SvImJ_P0060010 Pkia protein_coding protein_coding MGP_129S1SvImJ_T0060011.1 MGP_129S1SvImJ_G0027049.1 mouse_genomes_project 3 4250361 4262275 + MGP_129S1SvImJ_P0060011 Pkia protein_coding protein_coding MGP_129S1SvImJ_T0001156.1 MGP_129S1SvImJ_G0001082.1 mouse_genomes_project 3 29964636 29966035 - TEC TEC MGP_129S1SvImJ_T0001131.1 MGP_129S1SvImJ_G0001057.1 mouse_genomes_project 3 7211869 7212366 + TEC TEC MGP_129S1SvImJ_T0010571.1 MGP_129S1SvImJ_G0008687.1 mouse_genomes_project 3 137052563 137052642 - Mir1895 miRNA miRNA MGP_129S1SvImJ_T0061545.1 MGP_129S1SvImJ_G0027381.1 mouse_genomes_project 3 88194775 88196751 - MGP_129S1SvImJ_P0061545 Apoa1bp protein_coding protein_coding MGP_129S1SvImJ_T0007495.1 MGP_129S1SvImJ_G0006145.1 mouse_genomes_project 3 28047888 28049274 - lincRNA lincRNA MGP_129S1SvImJ_T0001228.1 MGP_129S1SvImJ_G0001152.1 mouse_genomes_project 3 51652889 51655962 - TEC TEC MGP_129S1SvImJ_T0102499.1 MGP_129S1SvImJ_G0040333.1 mouse_genomes_project 3 99858441 99860378 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0060520.1 MGP_129S1SvImJ_G0027159.1 mouse_genomes_project 3 34272550 34282844 + MGP_129S1SvImJ_P0060520 1810062G17Rik protein_coding protein_coding MGP_129S1SvImJ_T0007534.1 MGP_129S1SvImJ_G0006174.1 mouse_genomes_project 3 39482904 39487213 - Gm42434 lincRNA lincRNA MGP_129S1SvImJ_T0007535.1 MGP_129S1SvImJ_G0006174.1 mouse_genomes_project 3 39487088 39487719 - Gm42434 lincRNA lincRNA MGP_129S1SvImJ_T0064222.1 MGP_129S1SvImJ_G0027972.1 mouse_genomes_project 3 149974730 149991911 - MGP_129S1SvImJ_P0064222 Spata1 protein_coding protein_coding MGP_129S1SvImJ_T0064223.1 MGP_129S1SvImJ_G0027972.1 mouse_genomes_project 3 149974736 150015798 - MGP_129S1SvImJ_P0064223 Spata1 protein_coding protein_coding MGP_129S1SvImJ_T0064224.1 MGP_129S1SvImJ_G0027972.1 mouse_genomes_project 3 149974737 150021705 - MGP_129S1SvImJ_P0064224 Spata1 protein_coding protein_coding MGP_129S1SvImJ_T0064225.1 MGP_129S1SvImJ_G0027972.1 mouse_genomes_project 3 149985702 149998385 - MGP_129S1SvImJ_P0064225 Spata1 protein_coding protein_coding MGP_129S1SvImJ_T0064226.1 MGP_129S1SvImJ_G0027972.1 mouse_genomes_project 3 149991797 150003978 - Spata1 protein_coding processed_transcript MGP_129S1SvImJ_T0064227.1 MGP_129S1SvImJ_G0027972.1 mouse_genomes_project 3 149997494 150021661 - Spata1 protein_coding processed_transcript MGP_129S1SvImJ_T0064228.1 MGP_129S1SvImJ_G0027972.1 mouse_genomes_project 3 150005863 150017068 - MGP_129S1SvImJ_P0064228 Spata1 protein_coding protein_coding MGP_129S1SvImJ_T0064266.1 MGP_129S1SvImJ_G0027981.1 mouse_genomes_project 3 152426647 152439619 - MGP_129S1SvImJ_P0064266 Adgrl2 protein_coding protein_coding MGP_129S1SvImJ_T0064267.1 MGP_129S1SvImJ_G0027981.1 mouse_genomes_project 3 152426650 152573355 - MGP_129S1SvImJ_P0064267 Adgrl2 protein_coding protein_coding MGP_129S1SvImJ_T0064268.1 MGP_129S1SvImJ_G0027981.1 mouse_genomes_project 3 152426915 152473210 - MGP_129S1SvImJ_P0064268 Adgrl2 protein_coding protein_coding MGP_129S1SvImJ_T0064269.1 MGP_129S1SvImJ_G0027981.1 mouse_genomes_project 3 152426919 152434842 - MGP_129S1SvImJ_P0064269 Adgrl2 protein_coding protein_coding MGP_129S1SvImJ_T0064270.1 MGP_129S1SvImJ_G0027981.1 mouse_genomes_project 3 152426920 152434050 - MGP_129S1SvImJ_P0064270 Adgrl2 protein_coding protein_coding MGP_129S1SvImJ_T0064271.1 MGP_129S1SvImJ_G0027981.1 mouse_genomes_project 3 152427140 152573246 - MGP_129S1SvImJ_P0064271 Adgrl2 protein_coding protein_coding MGP_129S1SvImJ_T0064272.1 MGP_129S1SvImJ_G0027981.1 mouse_genomes_project 3 152427157 152609956 - MGP_129S1SvImJ_P0064272 Adgrl2 protein_coding protein_coding MGP_129S1SvImJ_T0064273.1 MGP_129S1SvImJ_G0027981.1 mouse_genomes_project 3 152427157 152609956 - MGP_129S1SvImJ_P0064273 Adgrl2 protein_coding protein_coding MGP_129S1SvImJ_T0064274.1 MGP_129S1SvImJ_G0027981.1 mouse_genomes_project 3 152428004 152573362 - MGP_129S1SvImJ_P0064274 Adgrl2 protein_coding protein_coding MGP_129S1SvImJ_T0064275.1 MGP_129S1SvImJ_G0027981.1 mouse_genomes_project 3 152428157 152573375 - MGP_129S1SvImJ_P0064275 Adgrl2 protein_coding protein_coding MGP_129S1SvImJ_T0064276.1 MGP_129S1SvImJ_G0027981.1 mouse_genomes_project 3 152428157 152573375 - MGP_129S1SvImJ_P0064276 Adgrl2 protein_coding protein_coding MGP_129S1SvImJ_T0064277.1 MGP_129S1SvImJ_G0027981.1 mouse_genomes_project 3 152428157 152573375 - MGP_129S1SvImJ_P0064277 Adgrl2 protein_coding protein_coding MGP_129S1SvImJ_T0064278.1 MGP_129S1SvImJ_G0027981.1 mouse_genomes_project 3 152428157 152573375 - MGP_129S1SvImJ_P0064278 Adgrl2 protein_coding protein_coding MGP_129S1SvImJ_T0064279.1 MGP_129S1SvImJ_G0027981.1 mouse_genomes_project 3 152428786 152444999 - MGP_129S1SvImJ_P0064279 Adgrl2 protein_coding protein_coding MGP_129S1SvImJ_T0064280.1 MGP_129S1SvImJ_G0027981.1 mouse_genomes_project 3 152428809 152448156 - MGP_129S1SvImJ_P0064280 Adgrl2 protein_coding protein_coding MGP_129S1SvImJ_T0064281.1 MGP_129S1SvImJ_G0027981.1 mouse_genomes_project 3 152428828 152437467 - MGP_129S1SvImJ_P0064281 Adgrl2 protein_coding protein_coding MGP_129S1SvImJ_T0064282.1 MGP_129S1SvImJ_G0027981.1 mouse_genomes_project 3 152431390 152436245 - Adgrl2 protein_coding retained_intron MGP_129S1SvImJ_T0064283.1 MGP_129S1SvImJ_G0027981.1 mouse_genomes_project 3 152438242 152448290 - Adgrl2 protein_coding retained_intron MGP_129S1SvImJ_T0064284.1 MGP_129S1SvImJ_G0027981.1 mouse_genomes_project 3 152474023 152573223 - MGP_129S1SvImJ_P0064284 Adgrl2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0064285.1 MGP_129S1SvImJ_G0027981.1 mouse_genomes_project 3 152504281 152608717 - Adgrl2 protein_coding retained_intron MGP_129S1SvImJ_T0064286.1 MGP_129S1SvImJ_G0027981.1 mouse_genomes_project 3 152572547 152608883 - Adgrl2 protein_coding retained_intron MGP_129S1SvImJ_T0099769.1 MGP_129S1SvImJ_G0037836.1 mouse_genomes_project 3 95592862 95592964 - Gm26279 snRNA snRNA MGP_129S1SvImJ_T0007524.1 MGP_129S1SvImJ_G0006168.1 mouse_genomes_project 3 36310001 36327090 - Gm43536 lincRNA lincRNA MGP_129S1SvImJ_T0007525.1 MGP_129S1SvImJ_G0006168.1 mouse_genomes_project 3 36311123 36327092 - Gm43536 lincRNA lincRNA MGP_129S1SvImJ_T0007526.1 MGP_129S1SvImJ_G0006168.1 mouse_genomes_project 3 36312778 36327332 - Gm43536 lincRNA lincRNA MGP_129S1SvImJ_T0004246.1 MGP_129S1SvImJ_G0003739.1 mouse_genomes_project 3 36768650 36783181 - C230034O21Rik antisense antisense MGP_129S1SvImJ_T0014165.1 MGP_129S1SvImJ_G0012254.1 mouse_genomes_project 3 86305685 86306032 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063436.1 MGP_129S1SvImJ_G0027821.1 mouse_genomes_project 3 118919697 118937562 + MGP_129S1SvImJ_P0063436 4930455H04Rik protein_coding protein_coding MGP_129S1SvImJ_T0007650.1 MGP_129S1SvImJ_G0006261.1 mouse_genomes_project 3 103491020 103668271 + A230001M10Rik lincRNA lincRNA MGP_129S1SvImJ_T0007651.1 MGP_129S1SvImJ_G0006261.1 mouse_genomes_project 3 103491137 103518900 + A230001M10Rik lincRNA lincRNA MGP_129S1SvImJ_T0007652.1 MGP_129S1SvImJ_G0006261.1 mouse_genomes_project 3 103491453 103518105 + A230001M10Rik lincRNA lincRNA MGP_129S1SvImJ_T0099771.1 MGP_129S1SvImJ_G0037838.1 mouse_genomes_project 3 96566844 96567030 - Gm26361 snRNA snRNA MGP_129S1SvImJ_T0062810.1 MGP_129S1SvImJ_G0027684.1 mouse_genomes_project 3 104011423 104015839 - Tshb protein_coding retained_intron MGP_129S1SvImJ_T0062811.1 MGP_129S1SvImJ_G0027684.1 mouse_genomes_project 3 104013355 104018333 - MGP_129S1SvImJ_P0062811 Tshb protein_coding protein_coding MGP_129S1SvImJ_T0062812.1 MGP_129S1SvImJ_G0027684.1 mouse_genomes_project 3 104013355 104018293 - MGP_129S1SvImJ_P0062812 Tshb protein_coding protein_coding MGP_129S1SvImJ_T0062813.1 MGP_129S1SvImJ_G0027684.1 mouse_genomes_project 3 104013364 104018337 - MGP_129S1SvImJ_P0062813 Tshb protein_coding protein_coding MGP_129S1SvImJ_T0062814.1 MGP_129S1SvImJ_G0027684.1 mouse_genomes_project 3 104013376 104018293 - MGP_129S1SvImJ_P0062814 Tshb protein_coding protein_coding MGP_129S1SvImJ_T0062815.1 MGP_129S1SvImJ_G0027684.1 mouse_genomes_project 3 104013403 104018102 - MGP_129S1SvImJ_P0062815 Tshb protein_coding protein_coding MGP_129S1SvImJ_T0060400.1 MGP_129S1SvImJ_G0027140.1 mouse_genomes_project 3 30195823 30233532 - MGP_129S1SvImJ_P0060400 Gnb4 protein_coding protein_coding MGP_129S1SvImJ_T0060401.1 MGP_129S1SvImJ_G0027140.1 mouse_genomes_project 3 30199488 30233472 - Gnb4 protein_coding retained_intron MGP_129S1SvImJ_T0060402.1 MGP_129S1SvImJ_G0027140.1 mouse_genomes_project 3 30199488 30233464 - MGP_129S1SvImJ_P0060402 Gnb4 protein_coding protein_coding MGP_129S1SvImJ_T0060403.1 MGP_129S1SvImJ_G0027140.1 mouse_genomes_project 3 30200551 30233469 - MGP_129S1SvImJ_P0060403 Gnb4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060404.1 MGP_129S1SvImJ_G0027140.1 mouse_genomes_project 3 30203218 30213705 - Gnb4 protein_coding retained_intron MGP_129S1SvImJ_T0060405.1 MGP_129S1SvImJ_G0027140.1 mouse_genomes_project 3 30206648 30233426 - MGP_129S1SvImJ_P0060405 Gnb4 protein_coding protein_coding MGP_129S1SvImJ_T0060406.1 MGP_129S1SvImJ_G0027140.1 mouse_genomes_project 3 30207724 30233472 - Gnb4 protein_coding retained_intron MGP_129S1SvImJ_T0060407.1 MGP_129S1SvImJ_G0027140.1 mouse_genomes_project 3 30215361 30233476 - Gnb4 protein_coding retained_intron MGP_129S1SvImJ_T0099732.1 MGP_129S1SvImJ_G0037799.1 mouse_genomes_project 3 48092771 48092878 + Gm23096 snRNA snRNA MGP_129S1SvImJ_T0007492.1 MGP_129S1SvImJ_G0006142.1 mouse_genomes_project 3 26197652 26200133 - Gm32950 lincRNA lincRNA MGP_129S1SvImJ_T0062146.1 MGP_129S1SvImJ_G0027517.1 mouse_genomes_project 3 93252556 93254231 - MGP_129S1SvImJ_P0062146 Lce1j protein_coding protein_coding MGP_129S1SvImJ_T0062147.1 MGP_129S1SvImJ_G0027517.1 mouse_genomes_project 3 93252766 93253186 - MGP_129S1SvImJ_P0062147 Lce1j protein_coding protein_coding MGP_129S1SvImJ_T0063764.1 MGP_129S1SvImJ_G0027879.1 mouse_genomes_project 3 132690501 132774838 - MGP_129S1SvImJ_P0063764 Sec24b protein_coding protein_coding MGP_129S1SvImJ_T0063765.1 MGP_129S1SvImJ_G0027879.1 mouse_genomes_project 3 132691185 132692263 - Sec24b protein_coding retained_intron MGP_129S1SvImJ_T0063766.1 MGP_129S1SvImJ_G0027879.1 mouse_genomes_project 3 132691354 132692025 - Sec24b protein_coding processed_transcript MGP_129S1SvImJ_T0063767.1 MGP_129S1SvImJ_G0027879.1 mouse_genomes_project 3 132698114 132699858 - Sec24b protein_coding retained_intron MGP_129S1SvImJ_T0063768.1 MGP_129S1SvImJ_G0027879.1 mouse_genomes_project 3 132699772 132755463 - MGP_129S1SvImJ_P0063768 Sec24b protein_coding protein_coding MGP_129S1SvImJ_T0063769.1 MGP_129S1SvImJ_G0027879.1 mouse_genomes_project 3 132716829 132755433 - Sec24b protein_coding retained_intron MGP_129S1SvImJ_T0063770.1 MGP_129S1SvImJ_G0027879.1 mouse_genomes_project 3 132716855 132755739 - MGP_129S1SvImJ_P0063770 Sec24b protein_coding protein_coding MGP_129S1SvImJ_T0063771.1 MGP_129S1SvImJ_G0027879.1 mouse_genomes_project 3 132719228 132742548 - Sec24b protein_coding retained_intron MGP_129S1SvImJ_T0063772.1 MGP_129S1SvImJ_G0027879.1 mouse_genomes_project 3 132755855 132775484 - Sec24b protein_coding processed_transcript MGP_129S1SvImJ_T0062609.1 MGP_129S1SvImJ_G0027630.1 mouse_genomes_project 3 97598107 97600588 - MGP_129S1SvImJ_P0062609 Nudt17 protein_coding protein_coding MGP_129S1SvImJ_T0062610.1 MGP_129S1SvImJ_G0027630.1 mouse_genomes_project 3 97598108 97599284 - Nudt17 protein_coding retained_intron MGP_129S1SvImJ_T0062611.1 MGP_129S1SvImJ_G0027630.1 mouse_genomes_project 3 97598109 97600603 - MGP_129S1SvImJ_P0062611 Nudt17 protein_coding protein_coding MGP_129S1SvImJ_T0062612.1 MGP_129S1SvImJ_G0027630.1 mouse_genomes_project 3 97598208 97600580 - MGP_129S1SvImJ_P0062612 Nudt17 protein_coding protein_coding MGP_129S1SvImJ_T0001194.1 MGP_129S1SvImJ_G0001120.1 mouse_genomes_project 3 45552647 45555370 - TEC TEC MGP_129S1SvImJ_T0014378.1 MGP_129S1SvImJ_G0012467.1 mouse_genomes_project 3 150341217 150341896 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007486.1 MGP_129S1SvImJ_G0006136.1 mouse_genomes_project 3 19254415 19255206 - Gm43674 lincRNA lincRNA MGP_129S1SvImJ_T0061548.1 MGP_129S1SvImJ_G0027383.1 mouse_genomes_project 3 88219027 88263359 + MGP_129S1SvImJ_P0061548 Iqgap3 protein_coding protein_coding MGP_129S1SvImJ_T0061549.1 MGP_129S1SvImJ_G0027383.1 mouse_genomes_project 3 88219076 88226048 + Iqgap3 protein_coding retained_intron MGP_129S1SvImJ_T0061550.1 MGP_129S1SvImJ_G0027383.1 mouse_genomes_project 3 88219084 88250350 + MGP_129S1SvImJ_P0061550 Iqgap3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061551.1 MGP_129S1SvImJ_G0027383.1 mouse_genomes_project 3 88224645 88226041 + Iqgap3 protein_coding retained_intron MGP_129S1SvImJ_T0061552.1 MGP_129S1SvImJ_G0027383.1 mouse_genomes_project 3 88245113 88263355 + MGP_129S1SvImJ_P0061552 Iqgap3 protein_coding protein_coding MGP_129S1SvImJ_T0061553.1 MGP_129S1SvImJ_G0027383.1 mouse_genomes_project 3 88249075 88254475 + Iqgap3 protein_coding retained_intron MGP_129S1SvImJ_T0099734.1 MGP_129S1SvImJ_G0037801.1 mouse_genomes_project 3 54032460 54032567 + Gm25132 snRNA snRNA MGP_129S1SvImJ_T0060896.1 MGP_129S1SvImJ_G0027225.1 mouse_genomes_project 3 54362837 54950490 - MGP_129S1SvImJ_P0060896 Nbea protein_coding protein_coding MGP_129S1SvImJ_T0060897.1 MGP_129S1SvImJ_G0027225.1 mouse_genomes_project 3 54362841 54434887 - Nbea protein_coding processed_transcript MGP_129S1SvImJ_T0060898.1 MGP_129S1SvImJ_G0027225.1 mouse_genomes_project 3 54364162 54537877 - Nbea protein_coding processed_transcript MGP_129S1SvImJ_T0060899.1 MGP_129S1SvImJ_G0027225.1 mouse_genomes_project 3 54440306 54471568 - Nbea protein_coding retained_intron MGP_129S1SvImJ_T0060900.1 MGP_129S1SvImJ_G0027225.1 mouse_genomes_project 3 54529696 54538920 - Nbea protein_coding retained_intron MGP_129S1SvImJ_T0060901.1 MGP_129S1SvImJ_G0027225.1 mouse_genomes_project 3 54530605 54534465 - Nbea protein_coding retained_intron MGP_129S1SvImJ_T0060903.1 MGP_129S1SvImJ_G0027225.1 mouse_genomes_project 3 54727752 54735078 - Nbea protein_coding retained_intron MGP_129S1SvImJ_T0060904.1 MGP_129S1SvImJ_G0027225.1 mouse_genomes_project 3 54764634 54767059 - Nbea protein_coding retained_intron MGP_129S1SvImJ_T0060905.1 MGP_129S1SvImJ_G0027225.1 mouse_genomes_project 3 54780475 54783597 - Nbea protein_coding retained_intron MGP_129S1SvImJ_T0060906.1 MGP_129S1SvImJ_G0027225.1 mouse_genomes_project 3 54790246 54798637 - Nbea protein_coding retained_intron MGP_129S1SvImJ_T0062117.1 MGP_129S1SvImJ_G0027491.1 mouse_genomes_project 3 92808163 92809419 + MGP_129S1SvImJ_P0062117 Sprr2f protein_coding protein_coding MGP_129S1SvImJ_T0007570.1 MGP_129S1SvImJ_G0006198.1 mouse_genomes_project 3 59742012 59748495 + Gm38326 lincRNA lincRNA MGP_129S1SvImJ_T0001416.1 MGP_129S1SvImJ_G0001339.1 mouse_genomes_project 3 162043707 162045938 - TEC TEC MGP_129S1SvImJ_T0101014.1 MGP_129S1SvImJ_G0039081.1 mouse_genomes_project 3 31035530 31035673 - Gm24780 snoRNA snoRNA MGP_129S1SvImJ_T0013939.1 MGP_129S1SvImJ_G0012028.1 mouse_genomes_project 3 9394681 9395048 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001293.1 MGP_129S1SvImJ_G0001217.1 mouse_genomes_project 3 98343777 98344740 + TEC TEC MGP_129S1SvImJ_T0062188.1 MGP_129S1SvImJ_G0027546.1 mouse_genomes_project 3 94932463 94934592 + MGP_129S1SvImJ_P0062188 C2cd4d protein_coding protein_coding MGP_129S1SvImJ_T0062189.1 MGP_129S1SvImJ_G0027546.1 mouse_genomes_project 3 94932528 94933190 + C2cd4d protein_coding retained_intron MGP_129S1SvImJ_T0063773.1 MGP_129S1SvImJ_G0027880.1 mouse_genomes_project 3 132853329 132913381 + Col25a1 protein_coding processed_transcript MGP_129S1SvImJ_T0063774.1 MGP_129S1SvImJ_G0027880.1 mouse_genomes_project 3 132911389 133283922 + Col25a1 protein_coding retained_intron MGP_129S1SvImJ_T0063775.1 MGP_129S1SvImJ_G0027880.1 mouse_genomes_project 3 132911389 133335566 + MGP_129S1SvImJ_P0063775 Col25a1 protein_coding protein_coding MGP_129S1SvImJ_T0063776.1 MGP_129S1SvImJ_G0027880.1 mouse_genomes_project 3 132911389 133332010 + MGP_129S1SvImJ_P0063776 Col25a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063777.1 MGP_129S1SvImJ_G0027880.1 mouse_genomes_project 3 132911389 133330821 + MGP_129S1SvImJ_P0063777 Col25a1 protein_coding protein_coding MGP_129S1SvImJ_T0063778.1 MGP_129S1SvImJ_G0027880.1 mouse_genomes_project 3 132911982 133335576 + MGP_129S1SvImJ_P0063778 Col25a1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0063779.1 MGP_129S1SvImJ_G0027880.1 mouse_genomes_project 3 133216868 133219579 + Col25a1 protein_coding retained_intron MGP_129S1SvImJ_T0014329.1 MGP_129S1SvImJ_G0012418.1 mouse_genomes_project 3 135625810 135627977 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063440.1 MGP_129S1SvImJ_G0027823.1 mouse_genomes_project 3 119559351 119672376 + MGP_129S1SvImJ_P0063440 Plppr5 protein_coding protein_coding MGP_129S1SvImJ_T0063441.1 MGP_129S1SvImJ_G0027823.1 mouse_genomes_project 3 119559742 119672376 + MGP_129S1SvImJ_P0063441 Plppr5 protein_coding protein_coding MGP_129S1SvImJ_T0013926.1 MGP_129S1SvImJ_G0012015.1 mouse_genomes_project 3 5730516 5730849 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007732.1 MGP_129S1SvImJ_G0006327.1 mouse_genomes_project 3 140948170 140948613 - Gm43689 lincRNA lincRNA MGP_129S1SvImJ_T0007599.1 MGP_129S1SvImJ_G0006223.1 mouse_genomes_project 3 82748309 82829360 - Gm30097 lincRNA lincRNA MGP_129S1SvImJ_T0007600.1 MGP_129S1SvImJ_G0006223.1 mouse_genomes_project 3 82748411 82816690 - Gm30097 lincRNA lincRNA MGP_129S1SvImJ_T0001374.1 MGP_129S1SvImJ_G0001297.1 mouse_genomes_project 3 135553712 135555681 + TEC TEC MGP_129S1SvImJ_T0059993.1 MGP_129S1SvImJ_G0027043.1 mouse_genomes_project 3 251537 412933 + MGP_129S1SvImJ_P0059993 Hnf4g protein_coding protein_coding MGP_129S1SvImJ_T0059994.1 MGP_129S1SvImJ_G0027043.1 mouse_genomes_project 3 386671 413141 + MGP_129S1SvImJ_P0059994 Hnf4g protein_coding protein_coding MGP_129S1SvImJ_T0007576.1 MGP_129S1SvImJ_G0006204.1 mouse_genomes_project 3 67973709 67974864 + Gm35584 lincRNA lincRNA MGP_129S1SvImJ_T0064299.1 MGP_129S1SvImJ_G0027985.1 mouse_genomes_project 3 155621718 155667776 - MGP_129S1SvImJ_P0064299 Ptgfr protein_coding protein_coding MGP_129S1SvImJ_T0064300.1 MGP_129S1SvImJ_G0027985.1 mouse_genomes_project 3 155626549 155666140 - MGP_129S1SvImJ_P0064300 Ptgfr protein_coding protein_coding MGP_129S1SvImJ_T0064301.1 MGP_129S1SvImJ_G0027985.1 mouse_genomes_project 3 155626921 155664266 - Ptgfr protein_coding processed_transcript MGP_129S1SvImJ_T0061546.1 MGP_129S1SvImJ_G0027382.1 mouse_genomes_project 3 88206548 88215361 - MGP_129S1SvImJ_P0061546 Ttc24 protein_coding protein_coding MGP_129S1SvImJ_T0061547.1 MGP_129S1SvImJ_G0027382.1 mouse_genomes_project 3 88206951 88209199 - MGP_129S1SvImJ_P0061547 Ttc24 protein_coding protein_coding MGP_129S1SvImJ_T0001198.1 MGP_129S1SvImJ_G0001124.1 mouse_genomes_project 3 49047128 49048460 - TEC TEC MGP_129S1SvImJ_T0014118.1 MGP_129S1SvImJ_G0012207.1 mouse_genomes_project 3 68691641 68693001 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060049.1 MGP_129S1SvImJ_G0027061.1 mouse_genomes_project 3 7145580 7163056 - MGP_129S1SvImJ_P0060049 Gm37389 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0004347.1 MGP_129S1SvImJ_G0003812.1 mouse_genomes_project 3 108391410 108560995 - Gm27008 antisense antisense MGP_129S1SvImJ_T0004348.1 MGP_129S1SvImJ_G0003812.1 mouse_genomes_project 3 108407795 108563997 - Gm27008 antisense antisense MGP_129S1SvImJ_T0060655.1 MGP_129S1SvImJ_G0027183.1 mouse_genomes_project 3 38879646 38884098 - MGP_129S1SvImJ_P0060655 1700034I23Rik protein_coding protein_coding MGP_129S1SvImJ_T0004369.1 MGP_129S1SvImJ_G0003821.1 mouse_genomes_project 3 118246766 118249552 + Gm29151 antisense antisense MGP_129S1SvImJ_T0014192.1 MGP_129S1SvImJ_G0012281.1 mouse_genomes_project 3 93794970 93795425 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014244.1 MGP_129S1SvImJ_G0012333.1 mouse_genomes_project 3 105943463 105943805 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001202.1 MGP_129S1SvImJ_G0001128.1 mouse_genomes_project 3 49357235 49359874 - TEC TEC MGP_129S1SvImJ_T0001177.1 MGP_129S1SvImJ_G0001103.1 mouse_genomes_project 3 35575633 35578675 + TEC TEC MGP_129S1SvImJ_T0010562.1 MGP_129S1SvImJ_G0008678.1 mouse_genomes_project 3 124552938 124553057 - Mir760 miRNA miRNA MGP_129S1SvImJ_T0004294.1 MGP_129S1SvImJ_G0003777.1 mouse_genomes_project 3 89548237 89558164 + 4731419I09Rik antisense antisense MGP_129S1SvImJ_T0063383.1 MGP_129S1SvImJ_G0027811.1 mouse_genomes_project 3 118414641 118441487 + MGP_129S1SvImJ_P0063383 Dbt protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063384.1 MGP_129S1SvImJ_G0027811.1 mouse_genomes_project 3 118414654 118450512 + MGP_129S1SvImJ_P0063384 Dbt protein_coding protein_coding MGP_129S1SvImJ_T0063385.1 MGP_129S1SvImJ_G0027811.1 mouse_genomes_project 3 118421638 118436232 + Dbt protein_coding retained_intron MGP_129S1SvImJ_T0063733.1 MGP_129S1SvImJ_G0027872.1 mouse_genomes_project 3 132468627 132485055 - MGP_129S1SvImJ_P0063733 Lrit3 protein_coding protein_coding MGP_129S1SvImJ_T0063734.1 MGP_129S1SvImJ_G0027872.1 mouse_genomes_project 3 132469037 132485055 - MGP_129S1SvImJ_P0063734 Lrit3 protein_coding protein_coding MGP_129S1SvImJ_T0063735.1 MGP_129S1SvImJ_G0027872.1 mouse_genomes_project 3 132471500 132481546 - Lrit3 protein_coding retained_intron MGP_129S1SvImJ_T0063798.1 MGP_129S1SvImJ_G0027884.1 mouse_genomes_project 3 133693982 133695429 - MGP_129S1SvImJ_P0063798 protein_coding protein_coding MGP_129S1SvImJ_T0011568.1 MGP_129S1SvImJ_G0009684.1 mouse_genomes_project 3 104326786 104327086 + Gm23820 misc_RNA misc_RNA MGP_129S1SvImJ_T0014020.1 MGP_129S1SvImJ_G0012109.1 mouse_genomes_project 3 37142301 37142587 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063483.1 MGP_129S1SvImJ_G0027829.1 mouse_genomes_project 3 123469272 123501057 + MGP_129S1SvImJ_P0063483 Alg14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063484.1 MGP_129S1SvImJ_G0027829.1 mouse_genomes_project 3 123469322 123549114 + MGP_129S1SvImJ_P0063484 Alg14 protein_coding protein_coding MGP_129S1SvImJ_T0063485.1 MGP_129S1SvImJ_G0027829.1 mouse_genomes_project 3 123469364 123501519 + MGP_129S1SvImJ_P0063485 Alg14 protein_coding protein_coding MGP_129S1SvImJ_T0064086.1 MGP_129S1SvImJ_G0027943.1 mouse_genomes_project 3 145749245 145751166 + MGP_129S1SvImJ_P0064086 Gbp3 protein_coding protein_coding MGP_129S1SvImJ_T0064087.1 MGP_129S1SvImJ_G0027943.1 mouse_genomes_project 3 145749271 145762401 + MGP_129S1SvImJ_P0064087 Gbp3 protein_coding protein_coding MGP_129S1SvImJ_T0064088.1 MGP_129S1SvImJ_G0027943.1 mouse_genomes_project 3 145749362 145753390 + MGP_129S1SvImJ_P0064088 Gbp3 protein_coding protein_coding MGP_129S1SvImJ_T0064089.1 MGP_129S1SvImJ_G0027943.1 mouse_genomes_project 3 145749364 145762408 + MGP_129S1SvImJ_P0064089 Gbp3 protein_coding protein_coding MGP_129S1SvImJ_T0064090.1 MGP_129S1SvImJ_G0027943.1 mouse_genomes_project 3 145749394 145754716 + Gbp3 protein_coding processed_transcript MGP_129S1SvImJ_T0064091.1 MGP_129S1SvImJ_G0027943.1 mouse_genomes_project 3 145749637 145762406 + MGP_129S1SvImJ_P0064091 Gbp3 protein_coding protein_coding MGP_129S1SvImJ_T0064092.1 MGP_129S1SvImJ_G0027943.1 mouse_genomes_project 3 145750462 145754262 + MGP_129S1SvImJ_P0064092 Gbp3 protein_coding protein_coding MGP_129S1SvImJ_T0014381.1 MGP_129S1SvImJ_G0012470.1 mouse_genomes_project 3 152841746 152842205 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004250.1 MGP_129S1SvImJ_G0003743.1 mouse_genomes_project 3 48462120 48472159 + Gm37854 antisense antisense MGP_129S1SvImJ_T0001208.1 MGP_129S1SvImJ_G0001134.1 mouse_genomes_project 3 49960041 49962536 - TEC TEC MGP_129S1SvImJ_T0061902.1 MGP_129S1SvImJ_G0027442.1 mouse_genomes_project 3 89676446 89685739 + MGP_129S1SvImJ_P0061902 Pmvk protein_coding protein_coding MGP_129S1SvImJ_T0061903.1 MGP_129S1SvImJ_G0027442.1 mouse_genomes_project 3 89676485 89685751 + MGP_129S1SvImJ_P0061903 Pmvk protein_coding protein_coding MGP_129S1SvImJ_T0061904.1 MGP_129S1SvImJ_G0027442.1 mouse_genomes_project 3 89676686 89685741 + MGP_129S1SvImJ_P0061904 Pmvk protein_coding protein_coding MGP_129S1SvImJ_T0014062.1 MGP_129S1SvImJ_G0012151.1 mouse_genomes_project 3 52658927 52660060 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061127.1 MGP_129S1SvImJ_G0027281.1 mouse_genomes_project 3 66614599 66620528 - MGP_129S1SvImJ_P0061127 Lxn protein_coding protein_coding MGP_129S1SvImJ_T0061128.1 MGP_129S1SvImJ_G0027281.1 mouse_genomes_project 3 66614602 66618236 - Lxn protein_coding retained_intron MGP_129S1SvImJ_T0061129.1 MGP_129S1SvImJ_G0027281.1 mouse_genomes_project 3 66617662 66620384 - Lxn protein_coding retained_intron MGP_129S1SvImJ_T0099775.1 MGP_129S1SvImJ_G0037842.1 mouse_genomes_project 3 104197097 104197262 - Gm22826 snRNA snRNA MGP_129S1SvImJ_T0004335.1 MGP_129S1SvImJ_G0003804.1 mouse_genomes_project 3 103953718 103968720 - Tspan2os antisense antisense MGP_129S1SvImJ_T0101011.1 MGP_129S1SvImJ_G0039078.1 mouse_genomes_project 3 19663720 19663849 - Gm26354 snoRNA snoRNA MGP_129S1SvImJ_T0060993.1 MGP_129S1SvImJ_G0027252.1 mouse_genomes_project 3 58900869 58914379 + Aadac protein_coding processed_transcript MGP_129S1SvImJ_T0060994.1 MGP_129S1SvImJ_G0027252.1 mouse_genomes_project 3 58907602 58916035 + MGP_129S1SvImJ_P0060994 Aadac protein_coding protein_coding MGP_129S1SvImJ_T0060995.1 MGP_129S1SvImJ_G0027252.1 mouse_genomes_project 3 58907717 58911867 + Aadac protein_coding retained_intron MGP_129S1SvImJ_T0099781.1 MGP_129S1SvImJ_G0037848.1 mouse_genomes_project 3 111499389 111499495 + Gm25681 snRNA snRNA MGP_129S1SvImJ_T0004299.1 MGP_129S1SvImJ_G0003779.1 mouse_genomes_project 3 90162598 90163736 + Gm42809 antisense antisense MGP_129S1SvImJ_T0060907.1 MGP_129S1SvImJ_G0027227.1 mouse_genomes_project 3 56071380 56088412 - MGP_129S1SvImJ_P0060907 Tm4sf1 protein_coding protein_coding MGP_129S1SvImJ_T0060908.1 MGP_129S1SvImJ_G0027227.1 mouse_genomes_project 3 56071380 56080667 - MGP_129S1SvImJ_P0060908 Tm4sf1 protein_coding protein_coding MGP_129S1SvImJ_T0060909.1 MGP_129S1SvImJ_G0027227.1 mouse_genomes_project 3 56073253 56088464 - MGP_129S1SvImJ_P0060909 Tm4sf1 protein_coding protein_coding MGP_129S1SvImJ_T0060910.1 MGP_129S1SvImJ_G0027227.1 mouse_genomes_project 3 56073285 56080330 - Tm4sf1 protein_coding processed_transcript MGP_129S1SvImJ_T0060911.1 MGP_129S1SvImJ_G0027227.1 mouse_genomes_project 3 56078560 56080903 - MGP_129S1SvImJ_P0060911 Tm4sf1 protein_coding protein_coding MGP_129S1SvImJ_T0060912.1 MGP_129S1SvImJ_G0027227.1 mouse_genomes_project 3 56078596 56079481 - Tm4sf1 protein_coding retained_intron MGP_129S1SvImJ_T0062109.1 MGP_129S1SvImJ_G0027483.1 mouse_genomes_project 3 91435578 91438245 - MGP_129S1SvImJ_P0062109 9130204L05Rik protein_coding protein_coding MGP_129S1SvImJ_T0101044.1 MGP_129S1SvImJ_G0039111.1 mouse_genomes_project 3 88895130 88895265 + Gm25945 snoRNA snoRNA MGP_129S1SvImJ_T0014208.1 MGP_129S1SvImJ_G0012297.1 mouse_genomes_project 3 96894520 96894706 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001182.1 MGP_129S1SvImJ_G0001108.1 mouse_genomes_project 3 37570154 37573141 + TEC TEC MGP_129S1SvImJ_T0001224.1 MGP_129S1SvImJ_G0001148.1 mouse_genomes_project 3 50501587 50504877 - TEC TEC MGP_129S1SvImJ_T0007791.1 MGP_129S1SvImJ_G0006372.1 mouse_genomes_project 3 160051340 160083633 + 9330178D15Rik lincRNA lincRNA MGP_129S1SvImJ_T0060472.1 MGP_129S1SvImJ_G0027150.1 mouse_genomes_project 3 32330499 32332556 + MGP_129S1SvImJ_P0060472 Sox2 protein_coding protein_coding MGP_129S1SvImJ_T0062155.1 MGP_129S1SvImJ_G0027525.1 mouse_genomes_project 3 93436208 93437324 + MGP_129S1SvImJ_P0062155 protein_coding protein_coding MGP_129S1SvImJ_T0001319.1 MGP_129S1SvImJ_G0001243.1 mouse_genomes_project 3 123198861 123199558 - TEC TEC MGP_129S1SvImJ_T0001154.1 MGP_129S1SvImJ_G0001080.1 mouse_genomes_project 3 28469647 28469957 - TEC TEC MGP_129S1SvImJ_T0101059.1 MGP_129S1SvImJ_G0039126.1 mouse_genomes_project 3 116650175 116650307 - Gm23750 snoRNA snoRNA MGP_129S1SvImJ_T0007550.1 MGP_129S1SvImJ_G0006184.1 mouse_genomes_project 3 50718859 50721099 + Gm37170 lincRNA lincRNA MGP_129S1SvImJ_T0061077.1 MGP_129S1SvImJ_G0027272.1 mouse_genomes_project 3 64641623 64674047 + MGP_129S1SvImJ_P0061077 Tiparp protein_coding protein_coding MGP_129S1SvImJ_T0061078.1 MGP_129S1SvImJ_G0027272.1 mouse_genomes_project 3 64641673 64666114 + MGP_129S1SvImJ_P0061078 Tiparp protein_coding protein_coding MGP_129S1SvImJ_T0061079.1 MGP_129S1SvImJ_G0027272.1 mouse_genomes_project 3 64664557 64671161 + Tiparp protein_coding processed_transcript MGP_129S1SvImJ_T0001253.1 MGP_129S1SvImJ_G0001177.1 mouse_genomes_project 3 64800871 64803361 + TEC TEC MGP_129S1SvImJ_T0001378.1 MGP_129S1SvImJ_G0001301.1 mouse_genomes_project 3 136441556 136452129 - TEC TEC MGP_129S1SvImJ_T0062946.1 MGP_129S1SvImJ_G0027706.1 mouse_genomes_project 3 105695144 105768431 - MGP_129S1SvImJ_P0062946 Lrig2 protein_coding protein_coding MGP_129S1SvImJ_T0062947.1 MGP_129S1SvImJ_G0027706.1 mouse_genomes_project 3 105760914 105820890 - MGP_129S1SvImJ_P0062947 Lrig2 protein_coding protein_coding MGP_129S1SvImJ_T0062948.1 MGP_129S1SvImJ_G0027706.1 mouse_genomes_project 3 105760915 105820878 - MGP_129S1SvImJ_P0062948 Lrig2 protein_coding protein_coding MGP_129S1SvImJ_T0062949.1 MGP_129S1SvImJ_G0027706.1 mouse_genomes_project 3 105763490 105788672 - Lrig2 protein_coding retained_intron MGP_129S1SvImJ_T0062950.1 MGP_129S1SvImJ_G0027706.1 mouse_genomes_project 3 105764048 105820906 - MGP_129S1SvImJ_P0062950 Lrig2 protein_coding protein_coding MGP_129S1SvImJ_T0062951.1 MGP_129S1SvImJ_G0027706.1 mouse_genomes_project 3 105764264 105820968 - Lrig2 protein_coding retained_intron MGP_129S1SvImJ_T0062952.1 MGP_129S1SvImJ_G0027706.1 mouse_genomes_project 3 105766125 105771654 - Lrig2 protein_coding retained_intron MGP_129S1SvImJ_T0062953.1 MGP_129S1SvImJ_G0027706.1 mouse_genomes_project 3 105790073 105820711 - Lrig2 protein_coding retained_intron MGP_129S1SvImJ_T0062954.1 MGP_129S1SvImJ_G0027706.1 mouse_genomes_project 3 105799382 105800416 - Lrig2 protein_coding retained_intron MGP_129S1SvImJ_T0004306.1 MGP_129S1SvImJ_G0003786.1 mouse_genomes_project 3 95673830 95676417 - A730011C13Rik antisense antisense MGP_129S1SvImJ_T0004307.1 MGP_129S1SvImJ_G0003786.1 mouse_genomes_project 3 95674463 95676771 - A730011C13Rik antisense antisense MGP_129S1SvImJ_T0013925.1 MGP_129S1SvImJ_G0012014.1 mouse_genomes_project 3 5509171 5509484 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007756.1 MGP_129S1SvImJ_G0006348.1 mouse_genomes_project 3 147139803 147223214 - Gm42707 lincRNA lincRNA MGP_129S1SvImJ_T0007758.1 MGP_129S1SvImJ_G0006348.1 mouse_genomes_project 3 147176680 147222839 - Gm42707 lincRNA lincRNA MGP_129S1SvImJ_T0001188.1 MGP_129S1SvImJ_G0001114.1 mouse_genomes_project 3 40617341 40617886 + TEC TEC MGP_129S1SvImJ_T0014113.1 MGP_129S1SvImJ_G0012202.1 mouse_genomes_project 3 66905888 66907218 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001257.1 MGP_129S1SvImJ_G0001181.1 mouse_genomes_project 3 66633570 66635411 + TEC TEC MGP_129S1SvImJ_T0014162.1 MGP_129S1SvImJ_G0012251.1 mouse_genomes_project 3 85936178 85936653 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060332.1 MGP_129S1SvImJ_G0027126.1 mouse_genomes_project 3 28243987 28268555 + MGP_129S1SvImJ_P0060332 Samd7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060333.1 MGP_129S1SvImJ_G0027126.1 mouse_genomes_project 3 28244034 28268563 + MGP_129S1SvImJ_P0060333 Samd7 protein_coding protein_coding MGP_129S1SvImJ_T0060334.1 MGP_129S1SvImJ_G0027126.1 mouse_genomes_project 3 28248739 28266884 + MGP_129S1SvImJ_P0060334 Samd7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060335.1 MGP_129S1SvImJ_G0027126.1 mouse_genomes_project 3 28255272 28256513 + Samd7 protein_coding retained_intron MGP_129S1SvImJ_T0014286.1 MGP_129S1SvImJ_G0012375.1 mouse_genomes_project 3 118961178 118961908 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060046.1 MGP_129S1SvImJ_G0027059.1 mouse_genomes_project 3 6953443 6957511 + MGP_129S1SvImJ_P0060046 Fabp5 protein_coding protein_coding MGP_129S1SvImJ_T0060047.1 MGP_129S1SvImJ_G0027059.1 mouse_genomes_project 3 6953500 6957239 + Fabp5 protein_coding retained_intron MGP_129S1SvImJ_T0060849.1 MGP_129S1SvImJ_G0027215.1 mouse_genomes_project 3 53437273 53453387 + MGP_129S1SvImJ_P0060849 Alg5 protein_coding protein_coding MGP_129S1SvImJ_T0060850.1 MGP_129S1SvImJ_G0027215.1 mouse_genomes_project 3 53437293 53454910 + MGP_129S1SvImJ_P0060850 Alg5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060851.1 MGP_129S1SvImJ_G0027215.1 mouse_genomes_project 3 53437301 53449062 + MGP_129S1SvImJ_P0060851 Alg5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060852.1 MGP_129S1SvImJ_G0027215.1 mouse_genomes_project 3 53437307 53441639 + Alg5 protein_coding retained_intron MGP_129S1SvImJ_T0098866.1 MGP_129S1SvImJ_G0036945.1 mouse_genomes_project 3 22944816 22951109 - Gm37573 sense_intronic sense_intronic MGP_129S1SvImJ_T0014308.1 MGP_129S1SvImJ_G0012397.1 mouse_genomes_project 3 126298021 126299013 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007472.1 MGP_129S1SvImJ_G0006129.1 mouse_genomes_project 3 14978515 14988667 + Mir124-2hg lincRNA lincRNA MGP_129S1SvImJ_T0007473.1 MGP_129S1SvImJ_G0006129.1 mouse_genomes_project 3 14978551 14988117 + Mir124-2hg lincRNA lincRNA MGP_129S1SvImJ_T0007474.1 MGP_129S1SvImJ_G0006129.1 mouse_genomes_project 3 14982505 14983988 + Mir124-2hg lincRNA lincRNA MGP_129S1SvImJ_T0007475.1 MGP_129S1SvImJ_G0006129.1 mouse_genomes_project 3 14982513 14988173 + Mir124-2hg lincRNA lincRNA MGP_129S1SvImJ_T0007476.1 MGP_129S1SvImJ_G0006129.1 mouse_genomes_project 3 14982530 14988086 + Mir124-2hg lincRNA lincRNA MGP_129S1SvImJ_T0007477.1 MGP_129S1SvImJ_G0006129.1 mouse_genomes_project 3 14983478 14997449 + Mir124-2hg lincRNA lincRNA MGP_129S1SvImJ_T0007478.1 MGP_129S1SvImJ_G0006129.1 mouse_genomes_project 3 14984326 14988173 + Mir124-2hg lincRNA lincRNA MGP_129S1SvImJ_T0014151.1 MGP_129S1SvImJ_G0012240.1 mouse_genomes_project 3 79287761 79288408 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004422.1 MGP_129S1SvImJ_G0003860.1 mouse_genomes_project 3 156812048 156813206 + Gm16213 antisense antisense MGP_129S1SvImJ_T0061554.1 MGP_129S1SvImJ_G0027384.1 mouse_genomes_project 3 88286051 88317780 + MGP_129S1SvImJ_P0061554 Mef2d protein_coding protein_coding MGP_129S1SvImJ_T0061555.1 MGP_129S1SvImJ_G0027384.1 mouse_genomes_project 3 88286095 88315624 + MGP_129S1SvImJ_P0061555 Mef2d protein_coding protein_coding MGP_129S1SvImJ_T0061556.1 MGP_129S1SvImJ_G0027384.1 mouse_genomes_project 3 88286251 88314349 + MGP_129S1SvImJ_P0061556 Mef2d protein_coding protein_coding MGP_129S1SvImJ_T0061557.1 MGP_129S1SvImJ_G0027384.1 mouse_genomes_project 3 88286251 88314349 + MGP_129S1SvImJ_P0061557 Mef2d protein_coding protein_coding MGP_129S1SvImJ_T0061558.1 MGP_129S1SvImJ_G0027384.1 mouse_genomes_project 3 88286253 88301406 + Mef2d protein_coding retained_intron MGP_129S1SvImJ_T0061559.1 MGP_129S1SvImJ_G0027384.1 mouse_genomes_project 3 88308372 88314479 + Mef2d protein_coding processed_transcript MGP_129S1SvImJ_T0061560.1 MGP_129S1SvImJ_G0027384.1 mouse_genomes_project 3 88313945 88314600 + Mef2d protein_coding processed_transcript MGP_129S1SvImJ_T0063494.1 MGP_129S1SvImJ_G0027833.1 mouse_genomes_project 3 123928551 123942627 + MGP_129S1SvImJ_P0063494 F3 protein_coding protein_coding MGP_129S1SvImJ_T0063495.1 MGP_129S1SvImJ_G0027833.1 mouse_genomes_project 3 123928584 123934551 + F3 protein_coding processed_transcript MGP_129S1SvImJ_T0063496.1 MGP_129S1SvImJ_G0027833.1 mouse_genomes_project 3 123934338 123938642 + F3 protein_coding retained_intron MGP_129S1SvImJ_T0063497.1 MGP_129S1SvImJ_G0027833.1 mouse_genomes_project 3 123934562 123942627 + MGP_129S1SvImJ_P0063497 F3 protein_coding protein_coding MGP_129S1SvImJ_T0014155.1 MGP_129S1SvImJ_G0012244.1 mouse_genomes_project 3 81343529 81344314 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061262.1 MGP_129S1SvImJ_G0027314.1 mouse_genomes_project 3 79310785 79338685 - MGP_129S1SvImJ_P0061262 Etfdh protein_coding protein_coding MGP_129S1SvImJ_T0061263.1 MGP_129S1SvImJ_G0027314.1 mouse_genomes_project 3 79310800 79338519 - MGP_129S1SvImJ_P0061263 Etfdh protein_coding protein_coding MGP_129S1SvImJ_T0061264.1 MGP_129S1SvImJ_G0027314.1 mouse_genomes_project 3 79326006 79338505 - Etfdh protein_coding retained_intron MGP_129S1SvImJ_T0061265.1 MGP_129S1SvImJ_G0027314.1 mouse_genomes_project 3 79327576 79338685 - Etfdh protein_coding retained_intron MGP_129S1SvImJ_T0061266.1 MGP_129S1SvImJ_G0027314.1 mouse_genomes_project 3 79329755 79338540 - Etfdh protein_coding retained_intron MGP_129S1SvImJ_T0061267.1 MGP_129S1SvImJ_G0027314.1 mouse_genomes_project 3 79338070 79339322 - Etfdh protein_coding retained_intron MGP_129S1SvImJ_T0061268.1 MGP_129S1SvImJ_G0027314.1 mouse_genomes_project 3 79338088 79338561 - Etfdh protein_coding processed_transcript MGP_129S1SvImJ_T0063095.1 MGP_129S1SvImJ_G0027746.1 mouse_genomes_project 3 108771570 108792353 + MGP_129S1SvImJ_P0063095 Slc16a4 protein_coding protein_coding MGP_129S1SvImJ_T0063096.1 MGP_129S1SvImJ_G0027746.1 mouse_genomes_project 3 108771634 108782890 + Slc16a4 protein_coding retained_intron MGP_129S1SvImJ_T0063097.1 MGP_129S1SvImJ_G0027746.1 mouse_genomes_project 3 108771655 108787950 + MGP_129S1SvImJ_P0063097 Slc16a4 protein_coding protein_coding MGP_129S1SvImJ_T0004390.1 MGP_129S1SvImJ_G0003838.1 mouse_genomes_project 3 132421254 132434552 + 6330410L21Rik antisense antisense MGP_129S1SvImJ_T0061501.1 MGP_129S1SvImJ_G0027372.1 mouse_genomes_project 3 88035297 88046174 + MGP_129S1SvImJ_P0061501 Hdgf protein_coding protein_coding MGP_129S1SvImJ_T0061502.1 MGP_129S1SvImJ_G0027372.1 mouse_genomes_project 3 88037091 88044689 + MGP_129S1SvImJ_P0061502 Hdgf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061503.1 MGP_129S1SvImJ_G0027372.1 mouse_genomes_project 3 88037573 88044206 + Hdgf protein_coding processed_transcript MGP_129S1SvImJ_T0061504.1 MGP_129S1SvImJ_G0027372.1 mouse_genomes_project 3 88040073 88044222 + Hdgf protein_coding processed_transcript MGP_129S1SvImJ_T0061505.1 MGP_129S1SvImJ_G0027372.1 mouse_genomes_project 3 88044000 88044817 + Hdgf protein_coding retained_intron MGP_129S1SvImJ_T0101016.1 MGP_129S1SvImJ_G0039083.1 mouse_genomes_project 3 35673985 35674094 - Gm26404 snoRNA snoRNA MGP_129S1SvImJ_T0014243.1 MGP_129S1SvImJ_G0012332.1 mouse_genomes_project 3 105721179 105722087 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014146.1 MGP_129S1SvImJ_G0012235.1 mouse_genomes_project 3 77736645 77738209 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060134.1 MGP_129S1SvImJ_G0027090.1 mouse_genomes_project 3 16322516 16357047 - MGP_129S1SvImJ_P0060134 Armc1 protein_coding protein_coding MGP_129S1SvImJ_T0062243.1 MGP_129S1SvImJ_G0027558.1 mouse_genomes_project 3 95320588 95356593 + protein_coding retained_intron MGP_129S1SvImJ_T0062244.1 MGP_129S1SvImJ_G0027558.1 mouse_genomes_project 3 95320590 95354717 + MGP_129S1SvImJ_P0062244 protein_coding protein_coding MGP_129S1SvImJ_T0062245.1 MGP_129S1SvImJ_G0027558.1 mouse_genomes_project 3 95320681 95354724 + MGP_129S1SvImJ_P0062245 protein_coding protein_coding MGP_129S1SvImJ_T0062250.1 MGP_129S1SvImJ_G0027558.1 mouse_genomes_project 3 95353376 95360964 + protein_coding processed_transcript MGP_129S1SvImJ_T0062251.1 MGP_129S1SvImJ_G0027558.1 mouse_genomes_project 3 95353376 95361010 + MGP_129S1SvImJ_P0062251 protein_coding protein_coding MGP_129S1SvImJ_T0062252.1 MGP_129S1SvImJ_G0027558.1 mouse_genomes_project 3 95353376 95361207 + MGP_129S1SvImJ_P0062252 protein_coding protein_coding MGP_129S1SvImJ_T0062253.1 MGP_129S1SvImJ_G0027558.1 mouse_genomes_project 3 95353376 95356941 + MGP_129S1SvImJ_P0062253 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0010550.1 MGP_129S1SvImJ_G0008666.1 mouse_genomes_project 3 95833808 95833935 - Mir8099-1 miRNA miRNA MGP_129S1SvImJ_T0064231.1 MGP_129S1SvImJ_G0027974.1 mouse_genomes_project 3 150027949 150043390 - MGP_129S1SvImJ_P0064231 Rpf1 protein_coding protein_coding MGP_129S1SvImJ_T0064232.1 MGP_129S1SvImJ_G0027974.1 mouse_genomes_project 3 150028337 150030218 - MGP_129S1SvImJ_P0064232 Rpf1 protein_coding protein_coding MGP_129S1SvImJ_T0064233.1 MGP_129S1SvImJ_G0027974.1 mouse_genomes_project 3 150028416 150030486 - Rpf1 protein_coding retained_intron MGP_129S1SvImJ_T0064234.1 MGP_129S1SvImJ_G0027974.1 mouse_genomes_project 3 150030166 150043012 - Rpf1 protein_coding processed_transcript MGP_129S1SvImJ_T0064235.1 MGP_129S1SvImJ_G0027974.1 mouse_genomes_project 3 150032789 150043372 - MGP_129S1SvImJ_P0064235 Rpf1 protein_coding protein_coding MGP_129S1SvImJ_T0014100.1 MGP_129S1SvImJ_G0012189.1 mouse_genomes_project 3 64736342 64737149 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064008.1 MGP_129S1SvImJ_G0027926.1 mouse_genomes_project 3 141219477 141236260 - MGP_129S1SvImJ_P0064008 4930579F01Rik protein_coding protein_coding MGP_129S1SvImJ_T0064009.1 MGP_129S1SvImJ_G0027926.1 mouse_genomes_project 3 141219534 141236300 - MGP_129S1SvImJ_P0064009 4930579F01Rik protein_coding protein_coding MGP_129S1SvImJ_T0064010.1 MGP_129S1SvImJ_G0027926.1 mouse_genomes_project 3 141233144 141245053 - 4930579F01Rik protein_coding processed_transcript MGP_129S1SvImJ_T0010579.1 MGP_129S1SvImJ_G0008695.1 mouse_genomes_project 3 154785642 154785713 - Mir3963 miRNA miRNA MGP_129S1SvImJ_T0018036.1 MGP_129S1SvImJ_G0015523.1 mouse_genomes_project 3 125044955 125088682 - 4930447N08Rik processed_transcript antisense MGP_129S1SvImJ_T0018037.1 MGP_129S1SvImJ_G0015523.1 mouse_genomes_project 3 125052538 125088781 - 4930447N08Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018038.1 MGP_129S1SvImJ_G0015523.1 mouse_genomes_project 3 125081799 125088627 - 4930447N08Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018039.1 MGP_129S1SvImJ_G0015523.1 mouse_genomes_project 3 125081806 125088714 - 4930447N08Rik processed_transcript antisense MGP_129S1SvImJ_T0098881.1 MGP_129S1SvImJ_G0036959.1 mouse_genomes_project 3 101743304 101745425 - Gm42869 sense_intronic sense_intronic MGP_129S1SvImJ_T0061334.1 MGP_129S1SvImJ_G0027331.1 mouse_genomes_project 3 82828605 82835893 + MGP_129S1SvImJ_P0061334 Fgg protein_coding protein_coding MGP_129S1SvImJ_T0061335.1 MGP_129S1SvImJ_G0027331.1 mouse_genomes_project 3 82828742 82835549 + MGP_129S1SvImJ_P0061335 Fgg protein_coding protein_coding MGP_129S1SvImJ_T0007660.1 MGP_129S1SvImJ_G0006269.1 mouse_genomes_project 3 107199340 107201157 + Gm5547 lincRNA lincRNA MGP_129S1SvImJ_T0007661.1 MGP_129S1SvImJ_G0006269.1 mouse_genomes_project 3 107199367 107201150 + Gm5547 lincRNA lincRNA MGP_129S1SvImJ_T0007662.1 MGP_129S1SvImJ_G0006269.1 mouse_genomes_project 3 107200413 107201158 + Gm5547 lincRNA lincRNA MGP_129S1SvImJ_T0061868.1 MGP_129S1SvImJ_G0027435.1 mouse_genomes_project 3 89587954 89597501 - MGP_129S1SvImJ_P0061868 Zbtb7b protein_coding protein_coding MGP_129S1SvImJ_T0061869.1 MGP_129S1SvImJ_G0027435.1 mouse_genomes_project 3 89587954 89603912 - MGP_129S1SvImJ_P0061869 Zbtb7b protein_coding protein_coding MGP_129S1SvImJ_T0061870.1 MGP_129S1SvImJ_G0027435.1 mouse_genomes_project 3 89587954 89602700 - MGP_129S1SvImJ_P0061870 Zbtb7b protein_coding protein_coding MGP_129S1SvImJ_T0061871.1 MGP_129S1SvImJ_G0027435.1 mouse_genomes_project 3 89587954 89597983 - MGP_129S1SvImJ_P0061871 Zbtb7b protein_coding protein_coding MGP_129S1SvImJ_T0061872.1 MGP_129S1SvImJ_G0027435.1 mouse_genomes_project 3 89591448 89604220 - MGP_129S1SvImJ_P0061872 Zbtb7b protein_coding protein_coding MGP_129S1SvImJ_T0061873.1 MGP_129S1SvImJ_G0027435.1 mouse_genomes_project 3 89591732 89604177 - MGP_129S1SvImJ_P0061873 Zbtb7b protein_coding protein_coding MGP_129S1SvImJ_T0061874.1 MGP_129S1SvImJ_G0027435.1 mouse_genomes_project 3 89603143 89605318 - Zbtb7b protein_coding processed_transcript MGP_129S1SvImJ_T0007628.1 MGP_129S1SvImJ_G0006239.1 mouse_genomes_project 3 93305418 93305805 - Gm38201 lincRNA lincRNA MGP_129S1SvImJ_T0064150.1 MGP_129S1SvImJ_G0027957.1 mouse_genomes_project 3 148460928 148489654 - MGP_129S1SvImJ_P0064150 Clca2 protein_coding protein_coding MGP_129S1SvImJ_T0064151.1 MGP_129S1SvImJ_G0027957.1 mouse_genomes_project 3 148462422 148489656 - MGP_129S1SvImJ_P0064151 Clca2 protein_coding protein_coding MGP_129S1SvImJ_T0064152.1 MGP_129S1SvImJ_G0027957.1 mouse_genomes_project 3 148489393 148489993 - Clca2 protein_coding processed_transcript MGP_129S1SvImJ_T0001342.1 MGP_129S1SvImJ_G0001266.1 mouse_genomes_project 3 129088086 129088738 + TEC TEC MGP_129S1SvImJ_T0060143.1 MGP_129S1SvImJ_G0027092.1 mouse_genomes_project 3 16419670 16511012 - MGP_129S1SvImJ_P0060143 Pde7a protein_coding protein_coding MGP_129S1SvImJ_T0060144.1 MGP_129S1SvImJ_G0027092.1 mouse_genomes_project 3 16421244 16465823 - MGP_129S1SvImJ_P0060144 Pde7a protein_coding protein_coding MGP_129S1SvImJ_T0060145.1 MGP_129S1SvImJ_G0027092.1 mouse_genomes_project 3 16423947 16426591 - Pde7a protein_coding retained_intron MGP_129S1SvImJ_T0060146.1 MGP_129S1SvImJ_G0027092.1 mouse_genomes_project 3 16424284 16430092 - Pde7a protein_coding processed_transcript MGP_129S1SvImJ_T0060147.1 MGP_129S1SvImJ_G0027092.1 mouse_genomes_project 3 16426851 16461056 - MGP_129S1SvImJ_P0060147 Pde7a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060148.1 MGP_129S1SvImJ_G0027092.1 mouse_genomes_project 3 16426923 16434966 - Pde7a protein_coding retained_intron MGP_129S1SvImJ_T0060149.1 MGP_129S1SvImJ_G0027092.1 mouse_genomes_project 3 16430367 16510743 - MGP_129S1SvImJ_P0060149 Pde7a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060150.1 MGP_129S1SvImJ_G0027092.1 mouse_genomes_project 3 16434917 16465780 - MGP_129S1SvImJ_P0060150 Pde7a protein_coding protein_coding MGP_129S1SvImJ_T0060151.1 MGP_129S1SvImJ_G0027092.1 mouse_genomes_project 3 16457508 16510995 - Pde7a protein_coding retained_intron MGP_129S1SvImJ_T0060152.1 MGP_129S1SvImJ_G0027092.1 mouse_genomes_project 3 16457606 16510594 - Pde7a protein_coding processed_transcript MGP_129S1SvImJ_T0014071.1 MGP_129S1SvImJ_G0012160.1 mouse_genomes_project 3 56559007 56559799 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001398.1 MGP_129S1SvImJ_G0001321.1 mouse_genomes_project 3 156104358 156107134 - TEC TEC MGP_129S1SvImJ_T0060514.1 MGP_129S1SvImJ_G0027157.1 mouse_genomes_project 3 33949328 33999673 - MGP_129S1SvImJ_P0060514 Qrfpr protein_coding protein_coding MGP_129S1SvImJ_T0060515.1 MGP_129S1SvImJ_G0027157.1 mouse_genomes_project 3 33949330 33999711 - MGP_129S1SvImJ_P0060515 Qrfpr protein_coding protein_coding MGP_129S1SvImJ_T0060516.1 MGP_129S1SvImJ_G0027157.1 mouse_genomes_project 3 33959088 33999578 - Qrfpr protein_coding retained_intron MGP_129S1SvImJ_T0064182.1 MGP_129S1SvImJ_G0027961.1 mouse_genomes_project 3 149081670 149084679 - MGP_129S1SvImJ_P0064182 Cyr61 protein_coding protein_coding MGP_129S1SvImJ_T0102457.1 MGP_129S1SvImJ_G0040291.1 mouse_genomes_project 3 58296187 58296422 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0014083.1 MGP_129S1SvImJ_G0012172.1 mouse_genomes_project 3 58634136 58634537 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062462.1 MGP_129S1SvImJ_G0027593.1 mouse_genomes_project 3 96509186 96520164 - Tars2 protein_coding retained_intron MGP_129S1SvImJ_T0062463.1 MGP_129S1SvImJ_G0027593.1 mouse_genomes_project 3 96509186 96523868 - MGP_129S1SvImJ_P0062463 Tars2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062464.1 MGP_129S1SvImJ_G0027593.1 mouse_genomes_project 3 96509186 96523895 - MGP_129S1SvImJ_P0062464 Tars2 protein_coding protein_coding MGP_129S1SvImJ_T0062465.1 MGP_129S1SvImJ_G0027593.1 mouse_genomes_project 3 96509186 96523884 - MGP_129S1SvImJ_P0062465 Tars2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062466.1 MGP_129S1SvImJ_G0027593.1 mouse_genomes_project 3 96509186 96523904 - MGP_129S1SvImJ_P0062466 Tars2 protein_coding protein_coding MGP_129S1SvImJ_T0062467.1 MGP_129S1SvImJ_G0027593.1 mouse_genomes_project 3 96509186 96523904 - MGP_129S1SvImJ_P0062467 Tars2 protein_coding protein_coding MGP_129S1SvImJ_T0062468.1 MGP_129S1SvImJ_G0027593.1 mouse_genomes_project 3 96509229 96511357 - Tars2 protein_coding processed_transcript MGP_129S1SvImJ_T0062469.1 MGP_129S1SvImJ_G0027593.1 mouse_genomes_project 3 96513063 96523916 - MGP_129S1SvImJ_P0062469 Tars2 protein_coding protein_coding MGP_129S1SvImJ_T0062470.1 MGP_129S1SvImJ_G0027593.1 mouse_genomes_project 3 96514995 96517744 - Tars2 protein_coding processed_transcript MGP_129S1SvImJ_T0062471.1 MGP_129S1SvImJ_G0027593.1 mouse_genomes_project 3 96516726 96523904 - MGP_129S1SvImJ_P0062471 Tars2 protein_coding protein_coding MGP_129S1SvImJ_T0062472.1 MGP_129S1SvImJ_G0027593.1 mouse_genomes_project 3 96516760 96523871 - MGP_129S1SvImJ_P0062472 Tars2 protein_coding protein_coding MGP_129S1SvImJ_T0062473.1 MGP_129S1SvImJ_G0027593.1 mouse_genomes_project 3 96517763 96523904 - MGP_129S1SvImJ_P0062473 Tars2 protein_coding protein_coding MGP_129S1SvImJ_T0062474.1 MGP_129S1SvImJ_G0027593.1 mouse_genomes_project 3 96517786 96523388 - Tars2 protein_coding processed_transcript MGP_129S1SvImJ_T0062475.1 MGP_129S1SvImJ_G0027593.1 mouse_genomes_project 3 96517788 96523882 - MGP_129S1SvImJ_P0062475 Tars2 protein_coding protein_coding MGP_129S1SvImJ_T0062476.1 MGP_129S1SvImJ_G0027593.1 mouse_genomes_project 3 96519424 96520164 - Tars2 protein_coding retained_intron MGP_129S1SvImJ_T0062477.1 MGP_129S1SvImJ_G0027593.1 mouse_genomes_project 3 96519550 96523850 - Tars2 protein_coding processed_transcript MGP_129S1SvImJ_T0062478.1 MGP_129S1SvImJ_G0027593.1 mouse_genomes_project 3 96519885 96523505 - Tars2 protein_coding retained_intron MGP_129S1SvImJ_T0062479.1 MGP_129S1SvImJ_G0027593.1 mouse_genomes_project 3 96519949 96523882 - MGP_129S1SvImJ_P0062479 Tars2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062480.1 MGP_129S1SvImJ_G0027593.1 mouse_genomes_project 3 96523838 96529230 - MGP_129S1SvImJ_P0062480 Tars2 protein_coding protein_coding MGP_129S1SvImJ_T0062561.1 MGP_129S1SvImJ_G0027615.1 mouse_genomes_project 3 97082527 97082908 + MGP_129S1SvImJ_P0062561 Hist2h2bb protein_coding protein_coding MGP_129S1SvImJ_T0061506.1 MGP_129S1SvImJ_G0027373.1 mouse_genomes_project 3 88049545 88055221 + MGP_129S1SvImJ_P0061506 Mrpl24 protein_coding protein_coding MGP_129S1SvImJ_T0061507.1 MGP_129S1SvImJ_G0027373.1 mouse_genomes_project 3 88049545 88055211 + MGP_129S1SvImJ_P0061507 Mrpl24 protein_coding protein_coding MGP_129S1SvImJ_T0061508.1 MGP_129S1SvImJ_G0027373.1 mouse_genomes_project 3 88049575 88053601 + MGP_129S1SvImJ_P0061508 Mrpl24 protein_coding protein_coding MGP_129S1SvImJ_T0061509.1 MGP_129S1SvImJ_G0027373.1 mouse_genomes_project 3 88049596 88050562 + Mrpl24 protein_coding retained_intron MGP_129S1SvImJ_T0061510.1 MGP_129S1SvImJ_G0027373.1 mouse_genomes_project 3 88049602 88055221 + MGP_129S1SvImJ_P0061510 Mrpl24 protein_coding protein_coding MGP_129S1SvImJ_T0061511.1 MGP_129S1SvImJ_G0027373.1 mouse_genomes_project 3 88053184 88055221 + MGP_129S1SvImJ_P0061511 Mrpl24 protein_coding protein_coding MGP_129S1SvImJ_T0063879.1 MGP_129S1SvImJ_G0027902.1 mouse_genomes_project 3 138074791 138139585 + MGP_129S1SvImJ_P0063879 Cenpe protein_coding protein_coding MGP_129S1SvImJ_T0063880.1 MGP_129S1SvImJ_G0027902.1 mouse_genomes_project 3 138107929 138112918 + MGP_129S1SvImJ_P0063880 Cenpe protein_coding protein_coding MGP_129S1SvImJ_T0063881.1 MGP_129S1SvImJ_G0027902.1 mouse_genomes_project 3 138125227 138125667 + Cenpe protein_coding retained_intron MGP_129S1SvImJ_T0063882.1 MGP_129S1SvImJ_G0027902.1 mouse_genomes_project 3 138126030 138132142 + Cenpe protein_coding retained_intron MGP_129S1SvImJ_T0063883.1 MGP_129S1SvImJ_G0027902.1 mouse_genomes_project 3 138136588 138137120 + Cenpe protein_coding retained_intron MGP_129S1SvImJ_T0060378.1 MGP_129S1SvImJ_G0027136.1 mouse_genomes_project 3 29991434 30069181 + MGP_129S1SvImJ_P0060378 Pik3ca protein_coding protein_coding MGP_129S1SvImJ_T0060379.1 MGP_129S1SvImJ_G0027136.1 mouse_genomes_project 3 30064034 30065186 + Pik3ca protein_coding retained_intron MGP_129S1SvImJ_T0099777.1 MGP_129S1SvImJ_G0037844.1 mouse_genomes_project 3 105395199 105395301 + Gm23830 snRNA snRNA MGP_129S1SvImJ_T0102470.1 MGP_129S1SvImJ_G0040304.1 mouse_genomes_project 3 88521967 88524320 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0101065.1 MGP_129S1SvImJ_G0039132.1 mouse_genomes_project 3 125815712 125815842 - Snora24 snoRNA snoRNA MGP_129S1SvImJ_T0099756.1 MGP_129S1SvImJ_G0037823.1 mouse_genomes_project 3 86417826 86417995 + Gm23850 snRNA snRNA MGP_129S1SvImJ_T0098926.1 MGP_129S1SvImJ_G0037004.1 mouse_genomes_project 3 147803623 147806810 - Gm43707 sense_intronic sense_intronic MGP_129S1SvImJ_T0101908.1 MGP_129S1SvImJ_G0039819.1 mouse_genomes_project 3 58809986 58837249 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0063474.1 MGP_129S1SvImJ_G0027828.1 mouse_genomes_project 3 123372173 123457953 - MGP_129S1SvImJ_P0063474 Tmem56 protein_coding protein_coding MGP_129S1SvImJ_T0063475.1 MGP_129S1SvImJ_G0027828.1 mouse_genomes_project 3 123372420 123409872 - MGP_129S1SvImJ_P0063475 Tmem56 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0063476.1 MGP_129S1SvImJ_G0027828.1 mouse_genomes_project 3 123372420 123437068 - MGP_129S1SvImJ_P0063476 Tmem56 protein_coding protein_coding MGP_129S1SvImJ_T0063477.1 MGP_129S1SvImJ_G0027828.1 mouse_genomes_project 3 123372420 123437042 - MGP_129S1SvImJ_P0063477 Tmem56 protein_coding protein_coding MGP_129S1SvImJ_T0063478.1 MGP_129S1SvImJ_G0027828.1 mouse_genomes_project 3 123376449 123426652 - MGP_129S1SvImJ_P0063478 Tmem56 protein_coding protein_coding MGP_129S1SvImJ_T0063479.1 MGP_129S1SvImJ_G0027828.1 mouse_genomes_project 3 123400640 123457953 - MGP_129S1SvImJ_P0063479 Tmem56 protein_coding protein_coding MGP_129S1SvImJ_T0063480.1 MGP_129S1SvImJ_G0027828.1 mouse_genomes_project 3 123400684 123403830 - Tmem56 protein_coding retained_intron MGP_129S1SvImJ_T0063481.1 MGP_129S1SvImJ_G0027828.1 mouse_genomes_project 3 123408348 123457850 - Tmem56 protein_coding processed_transcript MGP_129S1SvImJ_T0063482.1 MGP_129S1SvImJ_G0027828.1 mouse_genomes_project 3 123408401 123457857 - Tmem56 protein_coding processed_transcript MGP_129S1SvImJ_T0061746.1 MGP_129S1SvImJ_G0027416.1 mouse_genomes_project 3 89326542 89336995 + MGP_129S1SvImJ_P0061746 Pklr protein_coding protein_coding MGP_129S1SvImJ_T0061747.1 MGP_129S1SvImJ_G0027416.1 mouse_genomes_project 3 89326574 89327860 + Pklr protein_coding processed_transcript MGP_129S1SvImJ_T0061748.1 MGP_129S1SvImJ_G0027416.1 mouse_genomes_project 3 89326972 89338166 + MGP_129S1SvImJ_P0061748 Pklr protein_coding protein_coding MGP_129S1SvImJ_T0061749.1 MGP_129S1SvImJ_G0027416.1 mouse_genomes_project 3 89326979 89331940 + MGP_129S1SvImJ_P0061749 Pklr protein_coding protein_coding MGP_129S1SvImJ_T0061750.1 MGP_129S1SvImJ_G0027416.1 mouse_genomes_project 3 89327023 89331313 + Pklr protein_coding processed_transcript MGP_129S1SvImJ_T0001329.1 MGP_129S1SvImJ_G0001253.1 mouse_genomes_project 3 125300031 125304446 + TEC TEC MGP_129S1SvImJ_T0063347.1 MGP_129S1SvImJ_G0027803.1 mouse_genomes_project 3 117573570 117578209 - MGP_129S1SvImJ_P0063347 S1pr1 protein_coding protein_coding MGP_129S1SvImJ_T0007453.1 MGP_129S1SvImJ_G0006116.1 mouse_genomes_project 3 5458046 5462450 + Gm32496 lincRNA lincRNA MGP_129S1SvImJ_T0061604.1 MGP_129S1SvImJ_G0027395.1 mouse_genomes_project 3 88550544 88566715 - MGP_129S1SvImJ_P0061604 Pmf1 protein_coding protein_coding MGP_129S1SvImJ_T0061605.1 MGP_129S1SvImJ_G0027395.1 mouse_genomes_project 3 88550544 88566710 - MGP_129S1SvImJ_P0061605 Pmf1 protein_coding protein_coding MGP_129S1SvImJ_T0061606.1 MGP_129S1SvImJ_G0027395.1 mouse_genomes_project 3 88550780 88566649 - Pmf1 protein_coding processed_transcript MGP_129S1SvImJ_T0061607.1 MGP_129S1SvImJ_G0027395.1 mouse_genomes_project 3 88552144 88553122 - Pmf1 protein_coding retained_intron MGP_129S1SvImJ_T0061608.1 MGP_129S1SvImJ_G0027395.1 mouse_genomes_project 3 88552469 88566670 - MGP_129S1SvImJ_P0061608 Pmf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061609.1 MGP_129S1SvImJ_G0027395.1 mouse_genomes_project 3 88553766 88556112 - Pmf1 protein_coding retained_intron MGP_129S1SvImJ_T0061610.1 MGP_129S1SvImJ_G0027395.1 mouse_genomes_project 3 88555934 88566692 - Pmf1 protein_coding retained_intron MGP_129S1SvImJ_T0014294.1 MGP_129S1SvImJ_G0012383.1 mouse_genomes_project 3 123422655 123423258 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014003.1 MGP_129S1SvImJ_G0012092.1 mouse_genomes_project 3 33989775 33990731 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060728.1 MGP_129S1SvImJ_G0027193.1 mouse_genomes_project 3 49693021 49714632 + MGP_129S1SvImJ_P0060728 Noct protein_coding protein_coding MGP_129S1SvImJ_T0060729.1 MGP_129S1SvImJ_G0027193.1 mouse_genomes_project 3 49693044 49714619 + MGP_129S1SvImJ_P0060729 Noct protein_coding protein_coding MGP_129S1SvImJ_T0062160.1 MGP_129S1SvImJ_G0027529.1 mouse_genomes_project 3 93495387 93496614 - MGP_129S1SvImJ_P0062160 Lce1m protein_coding protein_coding MGP_129S1SvImJ_T0062161.1 MGP_129S1SvImJ_G0027529.1 mouse_genomes_project 3 93496060 93496613 - MGP_129S1SvImJ_P0062161 Lce1m protein_coding protein_coding MGP_129S1SvImJ_T0001259.1 MGP_129S1SvImJ_G0001183.1 mouse_genomes_project 3 68348559 68351542 - TEC TEC MGP_129S1SvImJ_T0007721.1 MGP_129S1SvImJ_G0006317.1 mouse_genomes_project 3 136967192 136999561 + Gm43192 lincRNA lincRNA MGP_129S1SvImJ_T0007479.1 MGP_129S1SvImJ_G0006130.1 mouse_genomes_project 3 15516877 15641868 - lincRNA lincRNA MGP_129S1SvImJ_T0061134.1 MGP_129S1SvImJ_G0027285.1 mouse_genomes_project 3 67057914 67850811 + MGP_129S1SvImJ_P0061134 Gm21949 protein_coding protein_coding MGP_129S1SvImJ_T0099803.1 MGP_129S1SvImJ_G0037870.1 mouse_genomes_project 3 161351969 161352076 - Gm23725 snRNA snRNA MGP_129S1SvImJ_T0061990.1 MGP_129S1SvImJ_G0027454.1 mouse_genomes_project 3 90371383 90499429 + MGP_129S1SvImJ_P0061990 Nup210l protein_coding protein_coding MGP_129S1SvImJ_T0061991.1 MGP_129S1SvImJ_G0027454.1 mouse_genomes_project 3 90371385 90499460 + MGP_129S1SvImJ_P0061991 Nup210l protein_coding protein_coding MGP_129S1SvImJ_T0007642.1 MGP_129S1SvImJ_G0006253.1 mouse_genomes_project 3 99989553 99993161 - 5730437C11Rik lincRNA lincRNA MGP_129S1SvImJ_T0018020.1 MGP_129S1SvImJ_G0015519.1 mouse_genomes_project 3 110721483 110723846 - Gm43223 processed_transcript lincRNA MGP_129S1SvImJ_T0018021.1 MGP_129S1SvImJ_G0015519.1 mouse_genomes_project 3 110721492 110723624 - Gm43223 processed_transcript processed_transcript MGP_129S1SvImJ_T0062296.1 MGP_129S1SvImJ_G0027564.1 mouse_genomes_project 3 95686020 95691238 - protein_coding retained_intron MGP_129S1SvImJ_T0062297.1 MGP_129S1SvImJ_G0027564.1 mouse_genomes_project 3 95686262 95694654 - protein_coding retained_intron MGP_129S1SvImJ_T0062298.1 MGP_129S1SvImJ_G0027564.1 mouse_genomes_project 3 95686262 95694835 - protein_coding retained_intron MGP_129S1SvImJ_T0062299.1 MGP_129S1SvImJ_G0027564.1 mouse_genomes_project 3 95686267 95694868 - MGP_129S1SvImJ_P0062299 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062300.1 MGP_129S1SvImJ_G0027564.1 mouse_genomes_project 3 95686905 95694806 - MGP_129S1SvImJ_P0062300 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0062301.1 MGP_129S1SvImJ_G0027564.1 mouse_genomes_project 3 95691270 95694879 - MGP_129S1SvImJ_P0062301 protein_coding protein_coding MGP_129S1SvImJ_T0062302.1 MGP_129S1SvImJ_G0027564.1 mouse_genomes_project 3 95691399 95694655 - MGP_129S1SvImJ_P0062302 protein_coding protein_coding MGP_129S1SvImJ_T0062303.1 MGP_129S1SvImJ_G0027564.1 mouse_genomes_project 3 95691604 95694649 - MGP_129S1SvImJ_P0062303 protein_coding protein_coding MGP_129S1SvImJ_T0063968.1 MGP_129S1SvImJ_G0027917.1 mouse_genomes_project 3 140885812 140888052 + MGP_129S1SvImJ_P0063968 H2afz protein_coding protein_coding MGP_129S1SvImJ_T0063969.1 MGP_129S1SvImJ_G0027917.1 mouse_genomes_project 3 140885830 140887316 + H2afz protein_coding processed_transcript MGP_129S1SvImJ_T0063970.1 MGP_129S1SvImJ_G0027917.1 mouse_genomes_project 3 140885933 140887681 + MGP_129S1SvImJ_P0063970 H2afz protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063971.1 MGP_129S1SvImJ_G0027917.1 mouse_genomes_project 3 140885933 140888158 + MGP_129S1SvImJ_P0063971 H2afz protein_coding protein_coding MGP_129S1SvImJ_T0063972.1 MGP_129S1SvImJ_G0027917.1 mouse_genomes_project 3 140886227 140887769 + H2afz protein_coding retained_intron MGP_129S1SvImJ_T0063973.1 MGP_129S1SvImJ_G0027917.1 mouse_genomes_project 3 140886347 140887620 + H2afz protein_coding retained_intron MGP_129S1SvImJ_T0007638.1 MGP_129S1SvImJ_G0006249.1 mouse_genomes_project 3 97258003 97258571 + Gm26654 lincRNA lincRNA MGP_129S1SvImJ_T0014285.1 MGP_129S1SvImJ_G0012374.1 mouse_genomes_project 3 118776032 118776422 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004261.1 MGP_129S1SvImJ_G0003752.1 mouse_genomes_project 3 54652380 54699833 + Gm43376 antisense antisense MGP_129S1SvImJ_T0004262.1 MGP_129S1SvImJ_G0003752.1 mouse_genomes_project 3 54652451 54654338 + Gm43376 antisense antisense MGP_129S1SvImJ_T0063356.1 MGP_129S1SvImJ_G0027805.1 mouse_genomes_project 3 117807059 117810946 - Slc30a7 protein_coding processed_transcript MGP_129S1SvImJ_T0063357.1 MGP_129S1SvImJ_G0027805.1 mouse_genomes_project 3 117807059 117880578 - MGP_129S1SvImJ_P0063357 Slc30a7 protein_coding protein_coding MGP_129S1SvImJ_T0063358.1 MGP_129S1SvImJ_G0027805.1 mouse_genomes_project 3 117855215 117864825 - Slc30a7 protein_coding processed_transcript MGP_129S1SvImJ_T0063359.1 MGP_129S1SvImJ_G0027805.1 mouse_genomes_project 3 117863827 117866037 - Slc30a7 protein_coding retained_intron MGP_129S1SvImJ_T0062055.1 MGP_129S1SvImJ_G0027466.1 mouse_genomes_project 3 90807316 90809718 - Snapin protein_coding retained_intron MGP_129S1SvImJ_T0062056.1 MGP_129S1SvImJ_G0027466.1 mouse_genomes_project 3 90807324 90810323 - MGP_129S1SvImJ_P0062056 Snapin protein_coding protein_coding MGP_129S1SvImJ_T0062057.1 MGP_129S1SvImJ_G0027466.1 mouse_genomes_project 3 90807660 90810283 - MGP_129S1SvImJ_P0062057 Snapin protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062058.1 MGP_129S1SvImJ_G0027466.1 mouse_genomes_project 3 90807663 90810314 - MGP_129S1SvImJ_P0062058 Snapin protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062059.1 MGP_129S1SvImJ_G0027466.1 mouse_genomes_project 3 90808289 90810082 - Snapin protein_coding retained_intron MGP_129S1SvImJ_T0062692.1 MGP_129S1SvImJ_G0027647.1 mouse_genomes_project 3 98995088 99083948 + Notch2 protein_coding retained_intron MGP_129S1SvImJ_T0062693.1 MGP_129S1SvImJ_G0027647.1 mouse_genomes_project 3 98995099 99135666 + MGP_129S1SvImJ_P0062693 Notch2 protein_coding protein_coding MGP_129S1SvImJ_T0014011.1 MGP_129S1SvImJ_G0012100.1 mouse_genomes_project 3 35179134 35179453 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007664.1 MGP_129S1SvImJ_G0006271.1 mouse_genomes_project 3 108504776 108519620 + AI504432 lincRNA lincRNA MGP_129S1SvImJ_T0061562.1 MGP_129S1SvImJ_G0027386.1 mouse_genomes_project 3 88391657 88438534 - MGP_129S1SvImJ_P0061562 Gm38392 protein_coding protein_coding MGP_129S1SvImJ_T0061563.1 MGP_129S1SvImJ_G0027386.1 mouse_genomes_project 3 88393472 88438534 - MGP_129S1SvImJ_P0061563 Gm38392 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0004336.1 MGP_129S1SvImJ_G0003805.1 mouse_genomes_project 3 104018798 104023336 - antisense antisense MGP_129S1SvImJ_T0007630.1 MGP_129S1SvImJ_G0006241.1 mouse_genomes_project 3 94982745 94986270 - 1700040D17Rik lincRNA lincRNA MGP_129S1SvImJ_T0060318.1 MGP_129S1SvImJ_G0027122.1 mouse_genomes_project 3 28097552 28117080 + MGP_129S1SvImJ_P0060318 Mynn protein_coding protein_coding MGP_129S1SvImJ_T0060319.1 MGP_129S1SvImJ_G0027122.1 mouse_genomes_project 3 28098118 28117080 + MGP_129S1SvImJ_P0060319 Mynn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060320.1 MGP_129S1SvImJ_G0027122.1 mouse_genomes_project 3 28098124 28115575 + MGP_129S1SvImJ_P0060320 Mynn protein_coding protein_coding MGP_129S1SvImJ_T0060321.1 MGP_129S1SvImJ_G0027122.1 mouse_genomes_project 3 28098126 28099648 + Mynn protein_coding retained_intron MGP_129S1SvImJ_T0060322.1 MGP_129S1SvImJ_G0027122.1 mouse_genomes_project 3 28098131 28115708 + MGP_129S1SvImJ_P0060322 Mynn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060323.1 MGP_129S1SvImJ_G0027122.1 mouse_genomes_project 3 28109000 28114002 + Mynn protein_coding retained_intron MGP_129S1SvImJ_T0001189.1 MGP_129S1SvImJ_G0001115.1 mouse_genomes_project 3 42783189 42786436 + TEC TEC MGP_129S1SvImJ_T0060620.1 MGP_129S1SvImJ_G0027177.1 mouse_genomes_project 3 38488658 38611981 + MGP_129S1SvImJ_P0060620 Intu protein_coding protein_coding MGP_129S1SvImJ_T0060621.1 MGP_129S1SvImJ_G0027177.1 mouse_genomes_project 3 38498131 38666922 + MGP_129S1SvImJ_P0060621 Intu protein_coding protein_coding MGP_129S1SvImJ_T0060622.1 MGP_129S1SvImJ_G0027177.1 mouse_genomes_project 3 38631690 38651969 + MGP_129S1SvImJ_P0060622 Intu protein_coding protein_coding MGP_129S1SvImJ_T0060227.1 MGP_129S1SvImJ_G0027108.1 mouse_genomes_project 3 24401285 24462296 - MGP_129S1SvImJ_P0060227 Ect2 protein_coding protein_coding MGP_129S1SvImJ_T0060228.1 MGP_129S1SvImJ_G0027108.1 mouse_genomes_project 3 24401285 24462313 - MGP_129S1SvImJ_P0060228 Ect2 protein_coding protein_coding MGP_129S1SvImJ_T0060229.1 MGP_129S1SvImJ_G0027108.1 mouse_genomes_project 3 24401286 24462289 - MGP_129S1SvImJ_P0060229 Ect2 protein_coding protein_coding MGP_129S1SvImJ_T0060230.1 MGP_129S1SvImJ_G0027108.1 mouse_genomes_project 3 24401289 24462285 - MGP_129S1SvImJ_P0060230 Ect2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060231.1 MGP_129S1SvImJ_G0027108.1 mouse_genomes_project 3 24402369 24421036 - MGP_129S1SvImJ_P0060231 Ect2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060232.1 MGP_129S1SvImJ_G0027108.1 mouse_genomes_project 3 24421080 24427553 - Ect2 protein_coding retained_intron MGP_129S1SvImJ_T0060233.1 MGP_129S1SvImJ_G0027108.1 mouse_genomes_project 3 24426738 24462247 - Ect2 protein_coding retained_intron MGP_129S1SvImJ_T0060234.1 MGP_129S1SvImJ_G0027108.1 mouse_genomes_project 3 24436312 24442132 - Ect2 protein_coding retained_intron MGP_129S1SvImJ_T0060235.1 MGP_129S1SvImJ_G0027108.1 mouse_genomes_project 3 24453385 24455636 - Ect2 protein_coding retained_intron MGP_129S1SvImJ_T0060236.1 MGP_129S1SvImJ_G0027108.1 mouse_genomes_project 3 24453455 24462289 - MGP_129S1SvImJ_P0060236 Ect2 protein_coding protein_coding MGP_129S1SvImJ_T0060237.1 MGP_129S1SvImJ_G0027108.1 mouse_genomes_project 3 24454403 24462263 - MGP_129S1SvImJ_P0060237 Ect2 protein_coding protein_coding MGP_129S1SvImJ_T0060238.1 MGP_129S1SvImJ_G0027108.1 mouse_genomes_project 3 24454419 24462245 - MGP_129S1SvImJ_P0060238 Ect2 protein_coding protein_coding MGP_129S1SvImJ_T0060239.1 MGP_129S1SvImJ_G0027108.1 mouse_genomes_project 3 24454463 24462217 - MGP_129S1SvImJ_P0060239 Ect2 protein_coding protein_coding MGP_129S1SvImJ_T0061130.1 MGP_129S1SvImJ_G0027282.1 mouse_genomes_project 3 66635564 66673125 - MGP_129S1SvImJ_P0061130 Rarres1 protein_coding protein_coding MGP_129S1SvImJ_T0061179.1 MGP_129S1SvImJ_G0027293.1 mouse_genomes_project 3 68293498 68355943 - MGP_129S1SvImJ_P0061179 Kpna4 protein_coding protein_coding MGP_129S1SvImJ_T0061180.1 MGP_129S1SvImJ_G0027293.1 mouse_genomes_project 3 68298570 68355922 - MGP_129S1SvImJ_P0061180 Kpna4 protein_coding protein_coding MGP_129S1SvImJ_T0061181.1 MGP_129S1SvImJ_G0027293.1 mouse_genomes_project 3 68323531 68355460 - MGP_129S1SvImJ_P0061181 Kpna4 protein_coding protein_coding MGP_129S1SvImJ_T0004325.1 MGP_129S1SvImJ_G0003797.1 mouse_genomes_project 3 97906479 97908529 - 9230114J08Rik antisense antisense MGP_129S1SvImJ_T0013920.1 MGP_129S1SvImJ_G0012009.1 mouse_genomes_project 3 4276371 4277390 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001210.1 MGP_129S1SvImJ_G0001136.1 mouse_genomes_project 3 50038400 50040508 - TEC TEC MGP_129S1SvImJ_T0098575.1 MGP_129S1SvImJ_G0036660.1 mouse_genomes_project 3 1088525 1088644 + n-R5s194 rRNA rRNA MGP_129S1SvImJ_T0060913.1 MGP_129S1SvImJ_G0027228.1 mouse_genomes_project 3 56214489 56232100 + MGP_129S1SvImJ_P0060913 Tm4sf4 protein_coding protein_coding MGP_129S1SvImJ_T0007633.1 MGP_129S1SvImJ_G0006244.1 mouse_genomes_project 3 96634549 96640790 + Gm26594 lincRNA lincRNA MGP_129S1SvImJ_T0014394.1 MGP_129S1SvImJ_G0012483.1 mouse_genomes_project 3 161962895 161963902 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001250.1 MGP_129S1SvImJ_G0001174.1 mouse_genomes_project 3 59535324 59538689 + TEC TEC MGP_129S1SvImJ_T0063203.1 MGP_129S1SvImJ_G0027775.1 mouse_genomes_project 3 109932613 109936953 + MGP_129S1SvImJ_P0063203 Psrc1 protein_coding protein_coding MGP_129S1SvImJ_T0063204.1 MGP_129S1SvImJ_G0027775.1 mouse_genomes_project 3 109932625 109934183 + Psrc1 protein_coding processed_transcript MGP_129S1SvImJ_T0063205.1 MGP_129S1SvImJ_G0027775.1 mouse_genomes_project 3 109932626 109935377 + Psrc1 protein_coding processed_transcript MGP_129S1SvImJ_T0063206.1 MGP_129S1SvImJ_G0027775.1 mouse_genomes_project 3 109932633 109937005 + MGP_129S1SvImJ_P0063206 Psrc1 protein_coding protein_coding MGP_129S1SvImJ_T0063207.1 MGP_129S1SvImJ_G0027775.1 mouse_genomes_project 3 109932653 109935158 + Psrc1 protein_coding processed_transcript MGP_129S1SvImJ_T0063208.1 MGP_129S1SvImJ_G0027775.1 mouse_genomes_project 3 109932690 109934184 + MGP_129S1SvImJ_P0063208 Psrc1 protein_coding protein_coding MGP_129S1SvImJ_T0063209.1 MGP_129S1SvImJ_G0027775.1 mouse_genomes_project 3 109932711 109935397 + Psrc1 protein_coding processed_transcript MGP_129S1SvImJ_T0063210.1 MGP_129S1SvImJ_G0027775.1 mouse_genomes_project 3 109933168 109934719 + Psrc1 protein_coding retained_intron MGP_129S1SvImJ_T0063211.1 MGP_129S1SvImJ_G0027775.1 mouse_genomes_project 3 109933628 109935648 + Psrc1 protein_coding retained_intron MGP_129S1SvImJ_T0063212.1 MGP_129S1SvImJ_G0027775.1 mouse_genomes_project 3 109933631 109935479 + Psrc1 protein_coding retained_intron MGP_129S1SvImJ_T0063213.1 MGP_129S1SvImJ_G0027775.1 mouse_genomes_project 3 109934839 109935487 + Psrc1 protein_coding processed_transcript MGP_129S1SvImJ_T0007508.1 MGP_129S1SvImJ_G0006156.1 mouse_genomes_project 3 32969038 32992542 - Gm43003 lincRNA lincRNA MGP_129S1SvImJ_T0014331.1 MGP_129S1SvImJ_G0012420.1 mouse_genomes_project 3 136396968 136397243 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062158.1 MGP_129S1SvImJ_G0027528.1 mouse_genomes_project 3 93491784 93493267 - MGP_129S1SvImJ_P0062158 Crct1 protein_coding protein_coding MGP_129S1SvImJ_T0062159.1 MGP_129S1SvImJ_G0027528.1 mouse_genomes_project 3 93492098 93493249 - MGP_129S1SvImJ_P0062159 Crct1 protein_coding protein_coding MGP_129S1SvImJ_T0101055.1 MGP_129S1SvImJ_G0039122.1 mouse_genomes_project 3 109384547 109384633 - Snord68 snoRNA snoRNA MGP_129S1SvImJ_T0017988.1 MGP_129S1SvImJ_G0015504.1 mouse_genomes_project 3 50041941 50049018 + 5031434O11Rik processed_transcript antisense MGP_129S1SvImJ_T0017989.1 MGP_129S1SvImJ_G0015504.1 mouse_genomes_project 3 50044377 50049006 + 5031434O11Rik processed_transcript antisense MGP_129S1SvImJ_T0017990.1 MGP_129S1SvImJ_G0015504.1 mouse_genomes_project 3 50045547 50049012 + 5031434O11Rik processed_transcript retained_intron MGP_129S1SvImJ_T0007726.1 MGP_129S1SvImJ_G0006321.1 mouse_genomes_project 3 139395492 139410491 - 1700030L20Rik lincRNA lincRNA MGP_129S1SvImJ_T0001274.1 MGP_129S1SvImJ_G0001198.1 mouse_genomes_project 3 85174656 85177665 - TEC TEC MGP_129S1SvImJ_T0061198.1 MGP_129S1SvImJ_G0027299.1 mouse_genomes_project 3 69303892 69325591 + MGP_129S1SvImJ_P0061198 Otol1 protein_coding protein_coding MGP_129S1SvImJ_T0060160.1 MGP_129S1SvImJ_G0027096.1 mouse_genomes_project 3 16895150 16897146 - MGP_129S1SvImJ_P0060160 Crh protein_coding protein_coding MGP_129S1SvImJ_T0098879.1 MGP_129S1SvImJ_G0036957.1 mouse_genomes_project 3 101613712 101616409 + Gm42868 sense_intronic sense_intronic MGP_129S1SvImJ_T0060357.1 MGP_129S1SvImJ_G0027130.1 mouse_genomes_project 3 28509480 28571943 + MGP_129S1SvImJ_P0060357 Prkci protein_coding protein_coding MGP_129S1SvImJ_T0060358.1 MGP_129S1SvImJ_G0027130.1 mouse_genomes_project 3 28518926 28547677 + MGP_129S1SvImJ_P0060358 Prkci protein_coding protein_coding MGP_129S1SvImJ_T0060359.1 MGP_129S1SvImJ_G0027130.1 mouse_genomes_project 3 28544885 28554391 + Prkci protein_coding processed_transcript MGP_129S1SvImJ_T0060360.1 MGP_129S1SvImJ_G0027130.1 mouse_genomes_project 3 28553443 28556218 + MGP_129S1SvImJ_P0060360 Prkci protein_coding protein_coding MGP_129S1SvImJ_T0060361.1 MGP_129S1SvImJ_G0027130.1 mouse_genomes_project 3 28553508 28554963 + Prkci protein_coding retained_intron MGP_129S1SvImJ_T0014288.1 MGP_129S1SvImJ_G0012377.1 mouse_genomes_project 3 119155333 119155976 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061411.1 MGP_129S1SvImJ_G0027351.1 mouse_genomes_project 3 86000484 86115363 + Sh3d19 protein_coding processed_transcript MGP_129S1SvImJ_T0061413.1 MGP_129S1SvImJ_G0027351.1 mouse_genomes_project 3 86069028 86115119 + Sh3d19 protein_coding processed_transcript MGP_129S1SvImJ_T0061414.1 MGP_129S1SvImJ_G0027351.1 mouse_genomes_project 3 86070766 86115407 + Sh3d19 protein_coding processed_transcript MGP_129S1SvImJ_T0061415.1 MGP_129S1SvImJ_G0027351.1 mouse_genomes_project 3 86070874 86115396 + Sh3d19 protein_coding processed_transcript MGP_129S1SvImJ_T0061416.1 MGP_129S1SvImJ_G0027351.1 mouse_genomes_project 3 86101878 86164640 + MGP_129S1SvImJ_P0061416 Sh3d19 protein_coding protein_coding MGP_129S1SvImJ_T0061417.1 MGP_129S1SvImJ_G0027351.1 mouse_genomes_project 3 86116258 86164636 + MGP_129S1SvImJ_P0061417 Sh3d19 protein_coding protein_coding MGP_129S1SvImJ_T0061418.1 MGP_129S1SvImJ_G0027351.1 mouse_genomes_project 3 86158591 86163228 + Sh3d19 protein_coding retained_intron MGP_129S1SvImJ_T0014166.1 MGP_129S1SvImJ_G0012255.1 mouse_genomes_project 3 86739969 86740105 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014018.1 MGP_129S1SvImJ_G0012107.1 mouse_genomes_project 3 36322430 36323262 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062623.1 MGP_129S1SvImJ_G0027633.1 mouse_genomes_project 3 97701367 97733371 - MGP_129S1SvImJ_P0062623 Cd160 protein_coding protein_coding MGP_129S1SvImJ_T0062624.1 MGP_129S1SvImJ_G0027633.1 mouse_genomes_project 3 97701367 97733371 - MGP_129S1SvImJ_P0062624 Cd160 protein_coding protein_coding MGP_129S1SvImJ_T0062625.1 MGP_129S1SvImJ_G0027633.1 mouse_genomes_project 3 97702759 97718524 - MGP_129S1SvImJ_P0062625 Cd160 protein_coding protein_coding MGP_129S1SvImJ_T0062626.1 MGP_129S1SvImJ_G0027633.1 mouse_genomes_project 3 97703207 97712870 - MGP_129S1SvImJ_P0062626 Cd160 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0064424.1 MGP_129S1SvImJ_G0028000.1 mouse_genomes_project 3 157891837 157916477 - MGP_129S1SvImJ_P0064424 Acadm protein_coding protein_coding MGP_129S1SvImJ_T0064425.1 MGP_129S1SvImJ_G0028000.1 mouse_genomes_project 3 157895880 157902200 - Acadm protein_coding retained_intron MGP_129S1SvImJ_T0064426.1 MGP_129S1SvImJ_G0028000.1 mouse_genomes_project 3 157896021 157909668 - Acadm protein_coding retained_intron MGP_129S1SvImJ_T0064427.1 MGP_129S1SvImJ_G0028000.1 mouse_genomes_project 3 157902181 157908652 - Acadm protein_coding retained_intron MGP_129S1SvImJ_T0064428.1 MGP_129S1SvImJ_G0028000.1 mouse_genomes_project 3 157908166 157910533 - Acadm protein_coding retained_intron MGP_129S1SvImJ_T0064429.1 MGP_129S1SvImJ_G0028000.1 mouse_genomes_project 3 157908172 157916312 - MGP_129S1SvImJ_P0064429 Acadm protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064430.1 MGP_129S1SvImJ_G0028000.1 mouse_genomes_project 3 157908226 157916291 - MGP_129S1SvImJ_P0064430 Acadm protein_coding protein_coding MGP_129S1SvImJ_T0064431.1 MGP_129S1SvImJ_G0028000.1 mouse_genomes_project 3 157910153 157916287 - Acadm protein_coding retained_intron MGP_129S1SvImJ_T0064432.1 MGP_129S1SvImJ_G0028000.1 mouse_genomes_project 3 157910515 157913745 - Acadm protein_coding retained_intron MGP_129S1SvImJ_T0064433.1 MGP_129S1SvImJ_G0028000.1 mouse_genomes_project 3 157913443 157916308 - Acadm protein_coding retained_intron MGP_129S1SvImJ_T0007504.1 MGP_129S1SvImJ_G0006153.1 mouse_genomes_project 3 32276512 32281235 - Gm43207 lincRNA lincRNA MGP_129S1SvImJ_T0098923.1 MGP_129S1SvImJ_G0037001.1 mouse_genomes_project 3 121857951 121861190 - Gm42664 sense_intronic sense_intronic MGP_129S1SvImJ_T0004411.1 MGP_129S1SvImJ_G0003851.1 mouse_genomes_project 3 144818378 144837182 - Gm15689 antisense antisense MGP_129S1SvImJ_T0064069.1 MGP_129S1SvImJ_G0027940.1 mouse_genomes_project 3 145407018 145571538 - MGP_129S1SvImJ_P0064069 protein_coding protein_coding MGP_129S1SvImJ_T0064070.1 MGP_129S1SvImJ_G0027940.1 mouse_genomes_project 3 145410102 145567526 - MGP_129S1SvImJ_P0064070 protein_coding protein_coding MGP_129S1SvImJ_T0064071.1 MGP_129S1SvImJ_G0027940.1 mouse_genomes_project 3 145410102 145567526 - MGP_129S1SvImJ_P0064071 protein_coding protein_coding MGP_129S1SvImJ_T0064072.1 MGP_129S1SvImJ_G0027940.1 mouse_genomes_project 3 145410102 145567526 - MGP_129S1SvImJ_P0064072 protein_coding protein_coding MGP_129S1SvImJ_T0064073.1 MGP_129S1SvImJ_G0027940.1 mouse_genomes_project 3 145410102 145571423 - MGP_129S1SvImJ_P0064073 protein_coding protein_coding MGP_129S1SvImJ_T0064074.1 MGP_129S1SvImJ_G0027940.1 mouse_genomes_project 3 145411889 145415073 - protein_coding retained_intron MGP_129S1SvImJ_T0064075.1 MGP_129S1SvImJ_G0027940.1 mouse_genomes_project 3 145417891 145474128 - MGP_129S1SvImJ_P0064075 protein_coding protein_coding MGP_129S1SvImJ_T0064076.1 MGP_129S1SvImJ_G0027940.1 mouse_genomes_project 3 145417950 145474128 - MGP_129S1SvImJ_P0064076 protein_coding protein_coding MGP_129S1SvImJ_T0064077.1 MGP_129S1SvImJ_G0027940.1 mouse_genomes_project 3 145472213 145567568 - MGP_129S1SvImJ_P0064077 protein_coding protein_coding MGP_129S1SvImJ_T0064078.1 MGP_129S1SvImJ_G0027940.1 mouse_genomes_project 3 145472448 145571452 - MGP_129S1SvImJ_P0064078 protein_coding protein_coding MGP_129S1SvImJ_T0064079.1 MGP_129S1SvImJ_G0027940.1 mouse_genomes_project 3 145472453 145567568 - MGP_129S1SvImJ_P0064079 protein_coding protein_coding MGP_129S1SvImJ_T0064080.1 MGP_129S1SvImJ_G0027940.1 mouse_genomes_project 3 145473369 145571463 - MGP_129S1SvImJ_P0064080 protein_coding protein_coding MGP_129S1SvImJ_T0013981.1 MGP_129S1SvImJ_G0012070.1 mouse_genomes_project 3 22427006 22427186 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014224.1 MGP_129S1SvImJ_G0012313.1 mouse_genomes_project 3 101196094 101196262 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064297.1 MGP_129S1SvImJ_G0027984.1 mouse_genomes_project 3 155570924 155575064 - MGP_129S1SvImJ_P0064297 Ifi44l protein_coding protein_coding MGP_129S1SvImJ_T0064298.1 MGP_129S1SvImJ_G0027984.1 mouse_genomes_project 3 155571826 155584355 - MGP_129S1SvImJ_P0064298 Ifi44l protein_coding unknown_likely_coding MGP_129S1SvImJ_T0010531.1 MGP_129S1SvImJ_G0008647.1 mouse_genomes_project 3 68230808 68230872 + Mir15b miRNA miRNA MGP_129S1SvImJ_T0001243.1 MGP_129S1SvImJ_G0001167.1 mouse_genomes_project 3 56454710 56455886 - TEC TEC MGP_129S1SvImJ_T0101034.1 MGP_129S1SvImJ_G0039101.1 mouse_genomes_project 3 76728799 76728876 - Gm23644 snoRNA snoRNA MGP_129S1SvImJ_T0001351.1 MGP_129S1SvImJ_G0001275.1 mouse_genomes_project 3 129629182 129633085 - TEC TEC MGP_129S1SvImJ_T0004290.1 MGP_129S1SvImJ_G0003773.1 mouse_genomes_project 3 88867852 88869682 - Gm43714 antisense antisense MGP_129S1SvImJ_T0062745.1 MGP_129S1SvImJ_G0027667.1 mouse_genomes_project 3 101568213 101605480 - Fam46c protein_coding processed_transcript MGP_129S1SvImJ_T0062746.1 MGP_129S1SvImJ_G0027667.1 mouse_genomes_project 3 101568216 101605476 - Fam46c protein_coding processed_transcript MGP_129S1SvImJ_T0062747.1 MGP_129S1SvImJ_G0027667.1 mouse_genomes_project 3 101584639 101605606 - MGP_129S1SvImJ_P0062747 Fam46c protein_coding protein_coding MGP_129S1SvImJ_T0061784.1 MGP_129S1SvImJ_G0027421.1 mouse_genomes_project 3 89403396 89409148 + MGP_129S1SvImJ_P0061784 Gba protein_coding protein_coding MGP_129S1SvImJ_T0061785.1 MGP_129S1SvImJ_G0027421.1 mouse_genomes_project 3 89403404 89409150 + MGP_129S1SvImJ_P0061785 Gba protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061786.1 MGP_129S1SvImJ_G0027421.1 mouse_genomes_project 3 89403408 89409150 + MGP_129S1SvImJ_P0061786 Gba protein_coding protein_coding MGP_129S1SvImJ_T0061787.1 MGP_129S1SvImJ_G0027421.1 mouse_genomes_project 3 89405953 89406857 + Gba protein_coding retained_intron MGP_129S1SvImJ_T0061788.1 MGP_129S1SvImJ_G0027421.1 mouse_genomes_project 3 89408685 89409435 + Gba protein_coding retained_intron MGP_129S1SvImJ_T0014262.1 MGP_129S1SvImJ_G0012351.1 mouse_genomes_project 3 111893004 111893341 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004276.1 MGP_129S1SvImJ_G0003764.1 mouse_genomes_project 3 79575759 79603253 - Gm36569 antisense antisense MGP_129S1SvImJ_T0061884.1 MGP_129S1SvImJ_G0027439.1 mouse_genomes_project 3 89632986 89645071 + MGP_129S1SvImJ_P0061884 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0061885.1 MGP_129S1SvImJ_G0027439.1 mouse_genomes_project 3 89633182 89642162 + MGP_129S1SvImJ_P0061885 protein_coding protein_coding MGP_129S1SvImJ_T0061886.1 MGP_129S1SvImJ_G0027439.1 mouse_genomes_project 3 89633202 89639860 + MGP_129S1SvImJ_P0061886 protein_coding protein_coding MGP_129S1SvImJ_T0061887.1 MGP_129S1SvImJ_G0027439.1 mouse_genomes_project 3 89633225 89642318 + MGP_129S1SvImJ_P0061887 protein_coding protein_coding MGP_129S1SvImJ_T0061888.1 MGP_129S1SvImJ_G0027439.1 mouse_genomes_project 3 89636248 89639659 + protein_coding retained_intron MGP_129S1SvImJ_T0061889.1 MGP_129S1SvImJ_G0027439.1 mouse_genomes_project 3 89637257 89642318 + MGP_129S1SvImJ_P0061889 protein_coding protein_coding MGP_129S1SvImJ_T0061890.1 MGP_129S1SvImJ_G0027439.1 mouse_genomes_project 3 89640141 89642974 + protein_coding processed_transcript MGP_129S1SvImJ_T0007764.1 MGP_129S1SvImJ_G0006354.1 mouse_genomes_project 3 149513498 149516865 + lincRNA lincRNA MGP_129S1SvImJ_T0063816.1 MGP_129S1SvImJ_G0027889.1 mouse_genomes_project 3 134292100 134373861 + MGP_129S1SvImJ_P0063816 Papss1 protein_coding protein_coding MGP_129S1SvImJ_T0063817.1 MGP_129S1SvImJ_G0027889.1 mouse_genomes_project 3 134292197 134373860 + MGP_129S1SvImJ_P0063817 Papss1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063818.1 MGP_129S1SvImJ_G0027889.1 mouse_genomes_project 3 134292228 134373860 + MGP_129S1SvImJ_P0063818 Papss1 protein_coding protein_coding MGP_129S1SvImJ_T0063819.1 MGP_129S1SvImJ_G0027889.1 mouse_genomes_project 3 134292231 134373861 + MGP_129S1SvImJ_P0063819 Papss1 protein_coding protein_coding MGP_129S1SvImJ_T0063820.1 MGP_129S1SvImJ_G0027889.1 mouse_genomes_project 3 134292267 134311305 + MGP_129S1SvImJ_P0063820 Papss1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0013992.1 MGP_129S1SvImJ_G0012081.1 mouse_genomes_project 3 28486959 28487422 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007643.1 MGP_129S1SvImJ_G0006254.1 mouse_genomes_project 3 100107333 100111256 + Gm12440 lincRNA lincRNA MGP_129S1SvImJ_T0001193.1 MGP_129S1SvImJ_G0001119.1 mouse_genomes_project 3 43618209 43621347 + TEC TEC MGP_129S1SvImJ_T0001163.1 MGP_129S1SvImJ_G0001089.1 mouse_genomes_project 3 31701294 31702368 - TEC TEC MGP_129S1SvImJ_T0102489.1 MGP_129S1SvImJ_G0040323.1 mouse_genomes_project 3 94639386 94639790 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0004245.1 MGP_129S1SvImJ_G0003738.1 mouse_genomes_project 3 35187231 35201678 - Fgf2os antisense antisense MGP_129S1SvImJ_T0060985.1 MGP_129S1SvImJ_G0027247.1 mouse_genomes_project 3 58188536 58219928 - MGP_129S1SvImJ_P0060985 Igsf10 protein_coding protein_coding MGP_129S1SvImJ_T0060986.1 MGP_129S1SvImJ_G0027247.1 mouse_genomes_project 3 58189727 58219831 - MGP_129S1SvImJ_P0060986 Igsf10 protein_coding protein_coding MGP_129S1SvImJ_T0060987.1 MGP_129S1SvImJ_G0027247.1 mouse_genomes_project 3 58189727 58220066 - MGP_129S1SvImJ_P0060987 Igsf10 protein_coding protein_coding MGP_129S1SvImJ_T0060988.1 MGP_129S1SvImJ_G0027247.1 mouse_genomes_project 3 58215442 58219928 - MGP_129S1SvImJ_P0060988 Igsf10 protein_coding protein_coding MGP_129S1SvImJ_T0001316.1 MGP_129S1SvImJ_G0001240.1 mouse_genomes_project 3 120572641 120576096 + TEC TEC MGP_129S1SvImJ_T0063523.1 MGP_129S1SvImJ_G0027837.1 mouse_genomes_project 3 124497240 124520940 + MGP_129S1SvImJ_P0063523 Gclm protein_coding protein_coding MGP_129S1SvImJ_T0063524.1 MGP_129S1SvImJ_G0027837.1 mouse_genomes_project 3 124497242 124517162 + MGP_129S1SvImJ_P0063524 Gclm protein_coding protein_coding MGP_129S1SvImJ_T0063525.1 MGP_129S1SvImJ_G0027837.1 mouse_genomes_project 3 124497335 124519774 + MGP_129S1SvImJ_P0063525 Gclm protein_coding protein_coding MGP_129S1SvImJ_T0063526.1 MGP_129S1SvImJ_G0027837.1 mouse_genomes_project 3 124515040 124520798 + Gclm protein_coding retained_intron MGP_129S1SvImJ_T0062555.1 MGP_129S1SvImJ_G0027609.1 mouse_genomes_project 3 97026663 97027107 + MGP_129S1SvImJ_P0062555 Hist2h2ab protein_coding protein_coding MGP_129S1SvImJ_T0061087.1 MGP_129S1SvImJ_G0027274.1 mouse_genomes_project 3 65080355 65092404 - Ccnl1 protein_coding retained_intron MGP_129S1SvImJ_T0061088.1 MGP_129S1SvImJ_G0027274.1 mouse_genomes_project 3 65080355 65092454 - MGP_129S1SvImJ_P0061088 Ccnl1 protein_coding protein_coding MGP_129S1SvImJ_T0061089.1 MGP_129S1SvImJ_G0027274.1 mouse_genomes_project 3 65080399 65092237 - MGP_129S1SvImJ_P0061089 Ccnl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061090.1 MGP_129S1SvImJ_G0027274.1 mouse_genomes_project 3 65080713 65092368 - Ccnl1 protein_coding retained_intron MGP_129S1SvImJ_T0061091.1 MGP_129S1SvImJ_G0027274.1 mouse_genomes_project 3 65080986 65082203 - Ccnl1 protein_coding retained_intron MGP_129S1SvImJ_T0061092.1 MGP_129S1SvImJ_G0027274.1 mouse_genomes_project 3 65082158 65091061 - MGP_129S1SvImJ_P0061092 Ccnl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061093.1 MGP_129S1SvImJ_G0027274.1 mouse_genomes_project 3 65082712 65085183 - Ccnl1 protein_coding retained_intron MGP_129S1SvImJ_T0061094.1 MGP_129S1SvImJ_G0027274.1 mouse_genomes_project 3 65083096 65092386 - Ccnl1 protein_coding retained_intron MGP_129S1SvImJ_T0061095.1 MGP_129S1SvImJ_G0027274.1 mouse_genomes_project 3 65084105 65091094 - MGP_129S1SvImJ_P0061095 Ccnl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061096.1 MGP_129S1SvImJ_G0027274.1 mouse_genomes_project 3 65084611 65086073 - Ccnl1 protein_coding retained_intron MGP_129S1SvImJ_T0061097.1 MGP_129S1SvImJ_G0027274.1 mouse_genomes_project 3 65085453 65087198 - Ccnl1 protein_coding retained_intron MGP_129S1SvImJ_T0061098.1 MGP_129S1SvImJ_G0027274.1 mouse_genomes_project 3 65085638 65091858 - Ccnl1 protein_coding retained_intron MGP_129S1SvImJ_T0061099.1 MGP_129S1SvImJ_G0027274.1 mouse_genomes_project 3 65089450 65092333 - MGP_129S1SvImJ_P0061099 Ccnl1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0063822.1 MGP_129S1SvImJ_G0027891.1 mouse_genomes_project 3 135403435 135418577 + MGP_129S1SvImJ_P0063822 Gimd1 protein_coding protein_coding MGP_129S1SvImJ_T0063823.1 MGP_129S1SvImJ_G0027891.1 mouse_genomes_project 3 135407969 135417858 + MGP_129S1SvImJ_P0063823 Gimd1 protein_coding protein_coding MGP_129S1SvImJ_T0007684.1 MGP_129S1SvImJ_G0006289.1 mouse_genomes_project 3 122757781 123045351 - lincRNA lincRNA MGP_129S1SvImJ_T0007685.1 MGP_129S1SvImJ_G0006289.1 mouse_genomes_project 3 122848204 123045350 - lincRNA lincRNA MGP_129S1SvImJ_T0007686.1 MGP_129S1SvImJ_G0006289.1 mouse_genomes_project 3 122852533 123045332 - lincRNA lincRNA MGP_129S1SvImJ_T0007687.1 MGP_129S1SvImJ_G0006289.1 mouse_genomes_project 3 122933919 123045309 - lincRNA lincRNA MGP_129S1SvImJ_T0062960.1 MGP_129S1SvImJ_G0027710.1 mouse_genomes_project 3 106112310 106117806 + MGP_129S1SvImJ_P0062960 Rhoc protein_coding protein_coding MGP_129S1SvImJ_T0062961.1 MGP_129S1SvImJ_G0027710.1 mouse_genomes_project 3 106112553 106116321 + MGP_129S1SvImJ_P0062961 Rhoc protein_coding protein_coding MGP_129S1SvImJ_T0062962.1 MGP_129S1SvImJ_G0027710.1 mouse_genomes_project 3 106115326 106116224 + Rhoc protein_coding retained_intron MGP_129S1SvImJ_T0014046.1 MGP_129S1SvImJ_G0012135.1 mouse_genomes_project 3 48072569 48072990 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013983.1 MGP_129S1SvImJ_G0012072.1 mouse_genomes_project 3 24320972 24321083 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102478.1 MGP_129S1SvImJ_G0040312.1 mouse_genomes_project 3 94187647 94426167 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0061441.1 MGP_129S1SvImJ_G0027359.1 mouse_genomes_project 3 87154359 87250202 - MGP_129S1SvImJ_P0061441 Kirrel protein_coding protein_coding MGP_129S1SvImJ_T0061442.1 MGP_129S1SvImJ_G0027359.1 mouse_genomes_project 3 87154367 87250249 - MGP_129S1SvImJ_P0061442 Kirrel protein_coding protein_coding MGP_129S1SvImJ_T0061443.1 MGP_129S1SvImJ_G0027359.1 mouse_genomes_project 3 87160354 87250052 - MGP_129S1SvImJ_P0061443 Kirrel protein_coding protein_coding MGP_129S1SvImJ_T0014309.1 MGP_129S1SvImJ_G0012398.1 mouse_genomes_project 3 126633389 126633636 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007711.1 MGP_129S1SvImJ_G0006307.1 mouse_genomes_project 3 133626934 133628374 + Gm36520 lincRNA lincRNA MGP_129S1SvImJ_T0063093.1 MGP_129S1SvImJ_G0027745.1 mouse_genomes_project 3 108758482 108764402 + MGP_129S1SvImJ_P0063093 Lamtor5 protein_coding protein_coding MGP_129S1SvImJ_T0063094.1 MGP_129S1SvImJ_G0027745.1 mouse_genomes_project 3 108758623 108764405 + MGP_129S1SvImJ_P0063094 Lamtor5 protein_coding protein_coding MGP_129S1SvImJ_T0061492.1 MGP_129S1SvImJ_G0027368.1 mouse_genomes_project 3 87902104 87919023 - MGP_129S1SvImJ_P0061492 Ntrk1 protein_coding protein_coding MGP_129S1SvImJ_T0060577.1 MGP_129S1SvImJ_G0027168.1 mouse_genomes_project 3 35158403 35162974 - MGP_129S1SvImJ_P0060577 Cetn4 protein_coding protein_coding MGP_129S1SvImJ_T0060578.1 MGP_129S1SvImJ_G0027168.1 mouse_genomes_project 3 35159267 35162974 - MGP_129S1SvImJ_P0060578 Cetn4 protein_coding protein_coding MGP_129S1SvImJ_T0060579.1 MGP_129S1SvImJ_G0027168.1 mouse_genomes_project 3 35159269 35162974 - MGP_129S1SvImJ_P0060579 Cetn4 protein_coding protein_coding MGP_129S1SvImJ_T0060580.1 MGP_129S1SvImJ_G0027168.1 mouse_genomes_project 3 35159404 35162948 - MGP_129S1SvImJ_P0060580 Cetn4 protein_coding protein_coding MGP_129S1SvImJ_T0060581.1 MGP_129S1SvImJ_G0027168.1 mouse_genomes_project 3 35159994 35163236 - MGP_129S1SvImJ_P0060581 Cetn4 protein_coding protein_coding MGP_129S1SvImJ_T0060592.1 MGP_129S1SvImJ_G0027171.1 mouse_genomes_project 3 35253496 35268156 - MGP_129S1SvImJ_P0060592 Nudt6 protein_coding protein_coding MGP_129S1SvImJ_T0060593.1 MGP_129S1SvImJ_G0027171.1 mouse_genomes_project 3 35253496 35268772 - MGP_129S1SvImJ_P0060593 Nudt6 protein_coding protein_coding MGP_129S1SvImJ_T0060594.1 MGP_129S1SvImJ_G0027171.1 mouse_genomes_project 3 35253560 35268146 - MGP_129S1SvImJ_P0060594 Nudt6 protein_coding protein_coding MGP_129S1SvImJ_T0060595.1 MGP_129S1SvImJ_G0027171.1 mouse_genomes_project 3 35253572 35268166 - MGP_129S1SvImJ_P0060595 Nudt6 protein_coding protein_coding MGP_129S1SvImJ_T0060596.1 MGP_129S1SvImJ_G0027171.1 mouse_genomes_project 3 35253661 35259233 - Nudt6 protein_coding processed_transcript MGP_129S1SvImJ_T0060597.1 MGP_129S1SvImJ_G0027171.1 mouse_genomes_project 3 35253938 35268149 - MGP_129S1SvImJ_P0060597 Nudt6 protein_coding protein_coding MGP_129S1SvImJ_T0060598.1 MGP_129S1SvImJ_G0027171.1 mouse_genomes_project 3 35258062 35268133 - MGP_129S1SvImJ_P0060598 Nudt6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060599.1 MGP_129S1SvImJ_G0027171.1 mouse_genomes_project 3 35260957 35268142 - MGP_129S1SvImJ_P0060599 Nudt6 protein_coding protein_coding MGP_129S1SvImJ_T0060859.1 MGP_129S1SvImJ_G0027219.1 mouse_genomes_project 3 53771975 53777130 - MGP_129S1SvImJ_P0060859 Ccna1 protein_coding protein_coding MGP_129S1SvImJ_T0060860.1 MGP_129S1SvImJ_G0027219.1 mouse_genomes_project 3 53771981 53781547 - MGP_129S1SvImJ_P0060860 Ccna1 protein_coding protein_coding MGP_129S1SvImJ_T0060861.1 MGP_129S1SvImJ_G0027219.1 mouse_genomes_project 3 53771983 53781534 - MGP_129S1SvImJ_P0060861 Ccna1 protein_coding protein_coding MGP_129S1SvImJ_T0060862.1 MGP_129S1SvImJ_G0027219.1 mouse_genomes_project 3 53771984 53781993 - MGP_129S1SvImJ_P0060862 Ccna1 protein_coding protein_coding MGP_129S1SvImJ_T0060863.1 MGP_129S1SvImJ_G0027219.1 mouse_genomes_project 3 53777077 53781974 - MGP_129S1SvImJ_P0060863 Ccna1 protein_coding protein_coding MGP_129S1SvImJ_T0060864.1 MGP_129S1SvImJ_G0027219.1 mouse_genomes_project 3 53777471 53781529 - MGP_129S1SvImJ_P0060864 Ccna1 protein_coding protein_coding MGP_129S1SvImJ_T0062710.1 MGP_129S1SvImJ_G0027656.1 mouse_genomes_project 3 99664501 99675252 - MGP_129S1SvImJ_P0062710 Hsd3b5 protein_coding protein_coding MGP_129S1SvImJ_T0010540.1 MGP_129S1SvImJ_G0008656.1 mouse_genomes_project 3 88599413 88599486 - Mir7011 miRNA miRNA MGP_129S1SvImJ_T0014040.1 MGP_129S1SvImJ_G0012129.1 mouse_genomes_project 3 45740991 45741701 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060916.1 MGP_129S1SvImJ_G0027230.1 mouse_genomes_project 3 56444049 56452022 - MGP_129S1SvImJ_P0060916 Commd2 protein_coding protein_coding MGP_129S1SvImJ_T0060917.1 MGP_129S1SvImJ_G0027230.1 mouse_genomes_project 3 56446059 56452015 - MGP_129S1SvImJ_P0060917 Commd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060918.1 MGP_129S1SvImJ_G0027230.1 mouse_genomes_project 3 56451408 56452022 - Commd2 protein_coding retained_intron MGP_129S1SvImJ_T0014239.1 MGP_129S1SvImJ_G0012328.1 mouse_genomes_project 3 104504924 104505213 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001248.1 MGP_129S1SvImJ_G0001172.1 mouse_genomes_project 3 58508217 58512150 + TEC TEC MGP_129S1SvImJ_T0062653.1 MGP_129S1SvImJ_G0027639.1 mouse_genomes_project 3 98123463 98147302 - MGP_129S1SvImJ_P0062653 Bcl9 protein_coding protein_coding MGP_129S1SvImJ_T0062654.1 MGP_129S1SvImJ_G0027639.1 mouse_genomes_project 3 98124429 98136317 - MGP_129S1SvImJ_P0062654 Bcl9 protein_coding protein_coding MGP_129S1SvImJ_T0062655.1 MGP_129S1SvImJ_G0027639.1 mouse_genomes_project 3 98130265 98133812 - Bcl9 protein_coding processed_transcript MGP_129S1SvImJ_T0062656.1 MGP_129S1SvImJ_G0027639.1 mouse_genomes_project 3 98134286 98149601 - Bcl9 protein_coding retained_intron MGP_129S1SvImJ_T0062657.1 MGP_129S1SvImJ_G0027639.1 mouse_genomes_project 3 98136337 98150117 - Bcl9 protein_coding processed_transcript MGP_129S1SvImJ_T0062658.1 MGP_129S1SvImJ_G0027639.1 mouse_genomes_project 3 98136362 98218106 - Bcl9 protein_coding processed_transcript MGP_129S1SvImJ_T0062659.1 MGP_129S1SvImJ_G0027639.1 mouse_genomes_project 3 98136362 98143899 - Bcl9 protein_coding processed_transcript MGP_129S1SvImJ_T0062660.1 MGP_129S1SvImJ_G0027639.1 mouse_genomes_project 3 98141746 98144131 - Bcl9 protein_coding retained_intron MGP_129S1SvImJ_T0064175.1 MGP_129S1SvImJ_G0027960.1 mouse_genomes_project 3 149005325 149036247 + MGP_129S1SvImJ_P0064175 Znhit6 protein_coding protein_coding MGP_129S1SvImJ_T0064176.1 MGP_129S1SvImJ_G0027960.1 mouse_genomes_project 3 149005352 149036929 + MGP_129S1SvImJ_P0064176 Znhit6 protein_coding protein_coding MGP_129S1SvImJ_T0064177.1 MGP_129S1SvImJ_G0027960.1 mouse_genomes_project 3 149005367 149007651 + MGP_129S1SvImJ_P0064177 Znhit6 protein_coding protein_coding MGP_129S1SvImJ_T0064178.1 MGP_129S1SvImJ_G0027960.1 mouse_genomes_project 3 149005378 149027620 + MGP_129S1SvImJ_P0064178 Znhit6 protein_coding protein_coding MGP_129S1SvImJ_T0064179.1 MGP_129S1SvImJ_G0027960.1 mouse_genomes_project 3 149005394 149011757 + MGP_129S1SvImJ_P0064179 Znhit6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064180.1 MGP_129S1SvImJ_G0027960.1 mouse_genomes_project 3 149005456 149025905 + MGP_129S1SvImJ_P0064180 Znhit6 protein_coding protein_coding MGP_129S1SvImJ_T0064181.1 MGP_129S1SvImJ_G0027960.1 mouse_genomes_project 3 149028822 149036146 + Znhit6 protein_coding retained_intron MGP_129S1SvImJ_T0061080.1 MGP_129S1SvImJ_G0027273.1 mouse_genomes_project 3 64788175 64808658 + MGP_129S1SvImJ_P0061080 Lekr1 protein_coding protein_coding MGP_129S1SvImJ_T0061081.1 MGP_129S1SvImJ_G0027273.1 mouse_genomes_project 3 64788182 64806703 + Lekr1 protein_coding processed_transcript MGP_129S1SvImJ_T0061082.1 MGP_129S1SvImJ_G0027273.1 mouse_genomes_project 3 64788193 64870955 + Lekr1 protein_coding processed_transcript MGP_129S1SvImJ_T0061083.1 MGP_129S1SvImJ_G0027273.1 mouse_genomes_project 3 64788215 64790384 + Lekr1 protein_coding retained_intron MGP_129S1SvImJ_T0061084.1 MGP_129S1SvImJ_G0027273.1 mouse_genomes_project 3 64788229 64900295 + Lekr1 protein_coding processed_transcript MGP_129S1SvImJ_T0061085.1 MGP_129S1SvImJ_G0027273.1 mouse_genomes_project 3 64788264 64855255 + Lekr1 protein_coding processed_transcript MGP_129S1SvImJ_T0061086.1 MGP_129S1SvImJ_G0027273.1 mouse_genomes_project 3 64806531 64958258 + Lekr1 protein_coding processed_transcript MGP_129S1SvImJ_T0099738.1 MGP_129S1SvImJ_G0037805.1 mouse_genomes_project 3 57842359 57842461 + Gm22491 snRNA snRNA MGP_129S1SvImJ_T0014099.1 MGP_129S1SvImJ_G0012188.1 mouse_genomes_project 3 64733174 64735910 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061182.1 MGP_129S1SvImJ_G0027294.1 mouse_genomes_project 3 68466602 68467802 + MGP_129S1SvImJ_P0061182 Arl14 protein_coding protein_coding MGP_129S1SvImJ_T0001171.1 MGP_129S1SvImJ_G0001097.1 mouse_genomes_project 3 34330672 34333783 - TEC TEC MGP_129S1SvImJ_T0014302.1 MGP_129S1SvImJ_G0012391.1 mouse_genomes_project 3 125151435 125151896 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011551.1 MGP_129S1SvImJ_G0009667.1 mouse_genomes_project 3 11116894 11117175 - Gm22026 misc_RNA misc_RNA MGP_129S1SvImJ_T0007552.1 MGP_129S1SvImJ_G0006186.1 mouse_genomes_project 3 51302624 51342935 + Gm2447 lincRNA lincRNA MGP_129S1SvImJ_T0007553.1 MGP_129S1SvImJ_G0006186.1 mouse_genomes_project 3 51328862 51342933 + Gm2447 lincRNA lincRNA MGP_129S1SvImJ_T0063600.1 MGP_129S1SvImJ_G0027853.1 mouse_genomes_project 3 126738445 126763628 - MGP_129S1SvImJ_P0063600 protein_coding protein_coding MGP_129S1SvImJ_T0063601.1 MGP_129S1SvImJ_G0027853.1 mouse_genomes_project 3 126738680 126763579 - MGP_129S1SvImJ_P0063601 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061057.1 MGP_129S1SvImJ_G0027263.1 mouse_genomes_project 3 62959889 62976579 - MGP_129S1SvImJ_P0061057 E130311K13Rik protein_coding protein_coding MGP_129S1SvImJ_T0061058.1 MGP_129S1SvImJ_G0027263.1 mouse_genomes_project 3 62969371 62976498 - E130311K13Rik protein_coding processed_transcript MGP_129S1SvImJ_T0061059.1 MGP_129S1SvImJ_G0027263.1 mouse_genomes_project 3 62973969 62976498 - E130311K13Rik protein_coding retained_intron MGP_129S1SvImJ_T0101699.1 MGP_129S1SvImJ_G0039708.1 mouse_genomes_project 3 126621263 126621693 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0063486.1 MGP_129S1SvImJ_G0027830.1 mouse_genomes_project 3 123616403 123648378 + Cnn3 protein_coding retained_intron MGP_129S1SvImJ_T0063487.1 MGP_129S1SvImJ_G0027830.1 mouse_genomes_project 3 123616630 123648382 + MGP_129S1SvImJ_P0063487 Cnn3 protein_coding protein_coding MGP_129S1SvImJ_T0063488.1 MGP_129S1SvImJ_G0027830.1 mouse_genomes_project 3 123617140 123641040 + Cnn3 protein_coding processed_transcript MGP_129S1SvImJ_T0007781.1 MGP_129S1SvImJ_G0006366.1 mouse_genomes_project 3 155069450 155071966 + 4930555A03Rik lincRNA lincRNA MGP_129S1SvImJ_T0007782.1 MGP_129S1SvImJ_G0006366.1 mouse_genomes_project 3 155069486 155071630 + 4930555A03Rik lincRNA lincRNA MGP_129S1SvImJ_T0007783.1 MGP_129S1SvImJ_G0006366.1 mouse_genomes_project 3 155069487 155070916 + 4930555A03Rik lincRNA lincRNA MGP_129S1SvImJ_T0007784.1 MGP_129S1SvImJ_G0006366.1 mouse_genomes_project 3 155070327 155071628 + 4930555A03Rik lincRNA lincRNA MGP_129S1SvImJ_T0062508.1 MGP_129S1SvImJ_G0027599.1 mouse_genomes_project 3 96677012 96682727 + MGP_129S1SvImJ_P0062508 Aph1a protein_coding protein_coding MGP_129S1SvImJ_T0062509.1 MGP_129S1SvImJ_G0027599.1 mouse_genomes_project 3 96677076 96678035 + MGP_129S1SvImJ_P0062509 Aph1a protein_coding protein_coding MGP_129S1SvImJ_T0062510.1 MGP_129S1SvImJ_G0027599.1 mouse_genomes_project 3 96677098 96681884 + MGP_129S1SvImJ_P0062510 Aph1a protein_coding protein_coding MGP_129S1SvImJ_T0062511.1 MGP_129S1SvImJ_G0027599.1 mouse_genomes_project 3 96677508 96682271 + Aph1a protein_coding retained_intron MGP_129S1SvImJ_T0064495.1 MGP_129S1SvImJ_G0028014.1 mouse_genomes_project 3 162102708 162163818 + MGP_129S1SvImJ_P0064495 Ankrd13c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064496.1 MGP_129S1SvImJ_G0028014.1 mouse_genomes_project 3 162102883 162162302 + MGP_129S1SvImJ_P0064496 Ankrd13c protein_coding protein_coding MGP_129S1SvImJ_T0064497.1 MGP_129S1SvImJ_G0028014.1 mouse_genomes_project 3 162102883 162164424 + MGP_129S1SvImJ_P0064497 Ankrd13c protein_coding protein_coding MGP_129S1SvImJ_T0064498.1 MGP_129S1SvImJ_G0028014.1 mouse_genomes_project 3 162102935 162163227 + Ankrd13c protein_coding retained_intron MGP_129S1SvImJ_T0064499.1 MGP_129S1SvImJ_G0028014.1 mouse_genomes_project 3 162144896 162151106 + Ankrd13c protein_coding retained_intron MGP_129S1SvImJ_T0064500.1 MGP_129S1SvImJ_G0028014.1 mouse_genomes_project 3 162148084 162160391 + Ankrd13c protein_coding retained_intron MGP_129S1SvImJ_T0064501.1 MGP_129S1SvImJ_G0028014.1 mouse_genomes_project 3 162149996 162157511 + Ankrd13c protein_coding processed_transcript MGP_129S1SvImJ_T0064502.1 MGP_129S1SvImJ_G0028014.1 mouse_genomes_project 3 162150574 162157481 + Ankrd13c protein_coding retained_intron MGP_129S1SvImJ_T0064503.1 MGP_129S1SvImJ_G0028014.1 mouse_genomes_project 3 162154900 162159488 + Ankrd13c protein_coding retained_intron MGP_129S1SvImJ_T0064504.1 MGP_129S1SvImJ_G0028014.1 mouse_genomes_project 3 162155789 162157527 + Ankrd13c protein_coding retained_intron MGP_129S1SvImJ_T0062009.1 MGP_129S1SvImJ_G0027459.1 mouse_genomes_project 3 90550242 90560205 + MGP_129S1SvImJ_P0062009 Crtc2 protein_coding protein_coding MGP_129S1SvImJ_T0062010.1 MGP_129S1SvImJ_G0027459.1 mouse_genomes_project 3 90550375 90560200 + Crtc2 protein_coding retained_intron MGP_129S1SvImJ_T0062011.1 MGP_129S1SvImJ_G0027459.1 mouse_genomes_project 3 90550375 90560200 + Crtc2 protein_coding retained_intron MGP_129S1SvImJ_T0062012.1 MGP_129S1SvImJ_G0027459.1 mouse_genomes_project 3 90550403 90554713 + Crtc2 protein_coding retained_intron MGP_129S1SvImJ_T0062013.1 MGP_129S1SvImJ_G0027459.1 mouse_genomes_project 3 90550420 90560200 + Crtc2 protein_coding processed_transcript MGP_129S1SvImJ_T0062014.1 MGP_129S1SvImJ_G0027459.1 mouse_genomes_project 3 90553374 90560200 + MGP_129S1SvImJ_P0062014 Crtc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062015.1 MGP_129S1SvImJ_G0027459.1 mouse_genomes_project 3 90554130 90555572 + Crtc2 protein_coding retained_intron MGP_129S1SvImJ_T0062016.1 MGP_129S1SvImJ_G0027459.1 mouse_genomes_project 3 90555044 90556401 + Crtc2 protein_coding retained_intron MGP_129S1SvImJ_T0001239.1 MGP_129S1SvImJ_G0001163.1 mouse_genomes_project 3 54777346 54779318 - TEC TEC MGP_129S1SvImJ_T0007655.1 MGP_129S1SvImJ_G0006264.1 mouse_genomes_project 3 103947050 103948314 + Gm42682 lincRNA lincRNA MGP_129S1SvImJ_T0060283.1 MGP_129S1SvImJ_G0027118.1 mouse_genomes_project 3 26200232 26205312 + MGP_129S1SvImJ_P0060283 Rpl22l1 protein_coding protein_coding MGP_129S1SvImJ_T0060284.1 MGP_129S1SvImJ_G0027118.1 mouse_genomes_project 3 26200265 26205321 + MGP_129S1SvImJ_P0060284 Rpl22l1 protein_coding protein_coding MGP_129S1SvImJ_T0060285.1 MGP_129S1SvImJ_G0027118.1 mouse_genomes_project 3 26200304 26205312 + Rpl22l1 protein_coding retained_intron MGP_129S1SvImJ_T0060286.1 MGP_129S1SvImJ_G0027118.1 mouse_genomes_project 3 26200306 26205319 + MGP_129S1SvImJ_P0060286 Rpl22l1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060287.1 MGP_129S1SvImJ_G0027118.1 mouse_genomes_project 3 26200331 26205228 + MGP_129S1SvImJ_P0060287 Rpl22l1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0060288.1 MGP_129S1SvImJ_G0027118.1 mouse_genomes_project 3 26200361 26204597 + Rpl22l1 protein_coding processed_transcript MGP_129S1SvImJ_T0060289.1 MGP_129S1SvImJ_G0027118.1 mouse_genomes_project 3 26200393 26205191 + Rpl22l1 protein_coding processed_transcript MGP_129S1SvImJ_T0060290.1 MGP_129S1SvImJ_G0027118.1 mouse_genomes_project 3 26200459 26205312 + Rpl22l1 protein_coding processed_transcript MGP_129S1SvImJ_T0060291.1 MGP_129S1SvImJ_G0027118.1 mouse_genomes_project 3 26201254 26205312 + Rpl22l1 protein_coding retained_intron MGP_129S1SvImJ_T0060292.1 MGP_129S1SvImJ_G0027118.1 mouse_genomes_project 3 26201295 26205313 + Rpl22l1 protein_coding retained_intron MGP_129S1SvImJ_T0004289.1 MGP_129S1SvImJ_G0003772.1 mouse_genomes_project 3 88792055 88796695 - Gm20652 antisense antisense MGP_129S1SvImJ_T0061223.1 MGP_129S1SvImJ_G0027307.1 mouse_genomes_project 3 75029600 75120182 + MGP_129S1SvImJ_P0061223 Serpini1 protein_coding protein_coding MGP_129S1SvImJ_T0061224.1 MGP_129S1SvImJ_G0027307.1 mouse_genomes_project 3 75029600 75089483 + MGP_129S1SvImJ_P0061224 Serpini1 protein_coding protein_coding MGP_129S1SvImJ_T0061225.1 MGP_129S1SvImJ_G0027307.1 mouse_genomes_project 3 75029614 75083798 + Serpini1 protein_coding processed_transcript MGP_129S1SvImJ_T0061226.1 MGP_129S1SvImJ_G0027307.1 mouse_genomes_project 3 75029631 75088975 + Serpini1 protein_coding retained_intron MGP_129S1SvImJ_T0060865.1 MGP_129S1SvImJ_G0027220.1 mouse_genomes_project 3 53839515 53864728 + MGP_129S1SvImJ_P0060865 Spg20 protein_coding protein_coding MGP_129S1SvImJ_T0060866.1 MGP_129S1SvImJ_G0027220.1 mouse_genomes_project 3 53839520 53856732 + Spg20 protein_coding retained_intron MGP_129S1SvImJ_T0060867.1 MGP_129S1SvImJ_G0027220.1 mouse_genomes_project 3 53839536 53864717 + MGP_129S1SvImJ_P0060867 Spg20 protein_coding protein_coding MGP_129S1SvImJ_T0060868.1 MGP_129S1SvImJ_G0027220.1 mouse_genomes_project 3 53839545 53841660 + Spg20 protein_coding retained_intron MGP_129S1SvImJ_T0060869.1 MGP_129S1SvImJ_G0027220.1 mouse_genomes_project 3 53839573 53864723 + MGP_129S1SvImJ_P0060869 Spg20 protein_coding protein_coding MGP_129S1SvImJ_T0060870.1 MGP_129S1SvImJ_G0027220.1 mouse_genomes_project 3 53839794 53857100 + MGP_129S1SvImJ_P0060870 Spg20 protein_coding protein_coding MGP_129S1SvImJ_T0060871.1 MGP_129S1SvImJ_G0027220.1 mouse_genomes_project 3 53840003 53844669 + MGP_129S1SvImJ_P0060871 Spg20 protein_coding protein_coding MGP_129S1SvImJ_T0060872.1 MGP_129S1SvImJ_G0027220.1 mouse_genomes_project 3 53843584 53844741 + MGP_129S1SvImJ_P0060872 Spg20 protein_coding protein_coding MGP_129S1SvImJ_T0062208.1 MGP_129S1SvImJ_G0027551.1 mouse_genomes_project 3 95016563 95021381 + Mrpl9 protein_coding retained_intron MGP_129S1SvImJ_T0062209.1 MGP_129S1SvImJ_G0027551.1 mouse_genomes_project 3 95016570 95024062 + MGP_129S1SvImJ_P0062209 Mrpl9 protein_coding protein_coding MGP_129S1SvImJ_T0062210.1 MGP_129S1SvImJ_G0027551.1 mouse_genomes_project 3 95016582 95026461 + MGP_129S1SvImJ_P0062210 Mrpl9 protein_coding protein_coding MGP_129S1SvImJ_T0101067.1 MGP_129S1SvImJ_G0039134.1 mouse_genomes_project 3 129445314 129445446 + Gm25501 snoRNA snoRNA MGP_129S1SvImJ_T0062096.1 MGP_129S1SvImJ_G0027477.1 mouse_genomes_project 3 90945873 90947406 + MGP_129S1SvImJ_P0062096 S100a6 protein_coding protein_coding MGP_129S1SvImJ_T0062097.1 MGP_129S1SvImJ_G0027477.1 mouse_genomes_project 3 90946145 90946999 + S100a6 protein_coding retained_intron MGP_129S1SvImJ_T0062098.1 MGP_129S1SvImJ_G0027477.1 mouse_genomes_project 3 90946296 90947406 + MGP_129S1SvImJ_P0062098 S100a6 protein_coding protein_coding MGP_129S1SvImJ_T0062099.1 MGP_129S1SvImJ_G0027477.1 mouse_genomes_project 3 90946751 90959738 + MGP_129S1SvImJ_P0062099 S100a6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0007731.1 MGP_129S1SvImJ_G0006326.1 mouse_genomes_project 3 140813924 140823019 - Gm31678 lincRNA lincRNA MGP_129S1SvImJ_T0062173.1 MGP_129S1SvImJ_G0027536.1 mouse_genomes_project 3 94023011 94028788 + MGP_129S1SvImJ_P0062173 S100a11 protein_coding protein_coding MGP_129S1SvImJ_T0060938.1 MGP_129S1SvImJ_G0027234.1 mouse_genomes_project 3 57243516 57296837 + MGP_129S1SvImJ_P0060938 Tsc22d2 protein_coding protein_coding MGP_129S1SvImJ_T0060939.1 MGP_129S1SvImJ_G0027234.1 mouse_genomes_project 3 57243521 57291774 + MGP_129S1SvImJ_P0060939 Tsc22d2 protein_coding protein_coding MGP_129S1SvImJ_T0060940.1 MGP_129S1SvImJ_G0027234.1 mouse_genomes_project 3 57244679 57247701 + Tsc22d2 protein_coding retained_intron MGP_129S1SvImJ_T0060941.1 MGP_129S1SvImJ_G0027234.1 mouse_genomes_project 3 57246285 57290363 + MGP_129S1SvImJ_P0060941 Tsc22d2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0001167.1 MGP_129S1SvImJ_G0001093.1 mouse_genomes_project 3 32364641 32364755 + TEC TEC MGP_129S1SvImJ_T0063255.1 MGP_129S1SvImJ_G0027784.1 mouse_genomes_project 3 110252598 110295073 - MGP_129S1SvImJ_P0063255 Gpsm2 protein_coding protein_coding MGP_129S1SvImJ_T0063256.1 MGP_129S1SvImJ_G0027784.1 mouse_genomes_project 3 110274170 110275260 - Gpsm2 protein_coding retained_intron MGP_129S1SvImJ_T0063257.1 MGP_129S1SvImJ_G0027784.1 mouse_genomes_project 3 110274586 110284411 - MGP_129S1SvImJ_P0063257 Gpsm2 protein_coding protein_coding MGP_129S1SvImJ_T0063258.1 MGP_129S1SvImJ_G0027784.1 mouse_genomes_project 3 110275722 110294880 - Gpsm2 protein_coding processed_transcript MGP_129S1SvImJ_T0001407.1 MGP_129S1SvImJ_G0001330.1 mouse_genomes_project 3 158254460 158256434 - TEC TEC MGP_129S1SvImJ_T0060161.1 MGP_129S1SvImJ_G0027097.1 mouse_genomes_project 3 17161772 17197545 + MGP_129S1SvImJ_P0060161 Cp protein_coding protein_coding MGP_129S1SvImJ_T0060162.1 MGP_129S1SvImJ_G0027097.1 mouse_genomes_project 3 17161772 17211861 + MGP_129S1SvImJ_P0060162 Cp protein_coding protein_coding MGP_129S1SvImJ_T0060163.1 MGP_129S1SvImJ_G0027097.1 mouse_genomes_project 3 17161779 17173783 + Cp protein_coding retained_intron MGP_129S1SvImJ_T0060164.1 MGP_129S1SvImJ_G0027097.1 mouse_genomes_project 3 17161787 17213417 + MGP_129S1SvImJ_P0060164 Cp protein_coding protein_coding MGP_129S1SvImJ_T0060165.1 MGP_129S1SvImJ_G0027097.1 mouse_genomes_project 3 17161829 17211861 + MGP_129S1SvImJ_P0060165 Cp protein_coding protein_coding MGP_129S1SvImJ_T0060166.1 MGP_129S1SvImJ_G0027097.1 mouse_genomes_project 3 17161937 17173451 + Cp protein_coding retained_intron MGP_129S1SvImJ_T0060167.1 MGP_129S1SvImJ_G0027097.1 mouse_genomes_project 3 17162002 17196932 + MGP_129S1SvImJ_P0060167 Cp protein_coding protein_coding MGP_129S1SvImJ_T0060168.1 MGP_129S1SvImJ_G0027097.1 mouse_genomes_project 3 17174287 17193484 + Cp protein_coding retained_intron MGP_129S1SvImJ_T0060169.1 MGP_129S1SvImJ_G0027097.1 mouse_genomes_project 3 17175330 17179499 + Cp protein_coding retained_intron MGP_129S1SvImJ_T0060170.1 MGP_129S1SvImJ_G0027097.1 mouse_genomes_project 3 17179205 17185159 + Cp protein_coding retained_intron MGP_129S1SvImJ_T0060171.1 MGP_129S1SvImJ_G0027097.1 mouse_genomes_project 3 17185045 17191814 + MGP_129S1SvImJ_P0060171 Cp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060172.1 MGP_129S1SvImJ_G0027097.1 mouse_genomes_project 3 17185845 17187905 + Cp protein_coding retained_intron MGP_129S1SvImJ_T0060173.1 MGP_129S1SvImJ_G0027097.1 mouse_genomes_project 3 17186420 17190321 + MGP_129S1SvImJ_P0060173 Cp protein_coding protein_coding MGP_129S1SvImJ_T0060174.1 MGP_129S1SvImJ_G0027097.1 mouse_genomes_project 3 17190029 17196989 + MGP_129S1SvImJ_P0060174 Cp protein_coding protein_coding MGP_129S1SvImJ_T0060175.1 MGP_129S1SvImJ_G0027097.1 mouse_genomes_project 3 17191962 17194046 + Cp protein_coding retained_intron MGP_129S1SvImJ_T0060176.1 MGP_129S1SvImJ_G0027097.1 mouse_genomes_project 3 17193570 17210610 + MGP_129S1SvImJ_P0060176 Cp protein_coding protein_coding MGP_129S1SvImJ_T0014095.1 MGP_129S1SvImJ_G0012184.1 mouse_genomes_project 3 62864008 62864659 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060440.1 MGP_129S1SvImJ_G0027146.1 mouse_genomes_project 3 31424234 31440432 + MGP_129S1SvImJ_P0060440 Ttc14 protein_coding protein_coding MGP_129S1SvImJ_T0060441.1 MGP_129S1SvImJ_G0027146.1 mouse_genomes_project 3 31424577 31425273 + Ttc14 protein_coding retained_intron MGP_129S1SvImJ_T0060442.1 MGP_129S1SvImJ_G0027146.1 mouse_genomes_project 3 31424585 31426476 + Ttc14 protein_coding retained_intron MGP_129S1SvImJ_T0060443.1 MGP_129S1SvImJ_G0027146.1 mouse_genomes_project 3 31424593 31427917 + MGP_129S1SvImJ_P0060443 Ttc14 protein_coding protein_coding MGP_129S1SvImJ_T0060444.1 MGP_129S1SvImJ_G0027146.1 mouse_genomes_project 3 31424593 31433027 + MGP_129S1SvImJ_P0060444 Ttc14 protein_coding protein_coding MGP_129S1SvImJ_T0060445.1 MGP_129S1SvImJ_G0027146.1 mouse_genomes_project 3 31424612 31432882 + MGP_129S1SvImJ_P0060445 Ttc14 protein_coding protein_coding MGP_129S1SvImJ_T0060446.1 MGP_129S1SvImJ_G0027146.1 mouse_genomes_project 3 31424615 31437863 + MGP_129S1SvImJ_P0060446 Ttc14 protein_coding protein_coding MGP_129S1SvImJ_T0060447.1 MGP_129S1SvImJ_G0027146.1 mouse_genomes_project 3 31424615 31434660 + MGP_129S1SvImJ_P0060447 Ttc14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060448.1 MGP_129S1SvImJ_G0027146.1 mouse_genomes_project 3 31424653 31435516 + MGP_129S1SvImJ_P0060448 Ttc14 protein_coding protein_coding MGP_129S1SvImJ_T0060449.1 MGP_129S1SvImJ_G0027146.1 mouse_genomes_project 3 31424665 31432480 + MGP_129S1SvImJ_P0060449 Ttc14 protein_coding protein_coding MGP_129S1SvImJ_T0060450.1 MGP_129S1SvImJ_G0027146.1 mouse_genomes_project 3 31426198 31433014 + MGP_129S1SvImJ_P0060450 Ttc14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060451.1 MGP_129S1SvImJ_G0027146.1 mouse_genomes_project 3 31427522 31428098 + Ttc14 protein_coding retained_intron MGP_129S1SvImJ_T0004273.1 MGP_129S1SvImJ_G0003761.1 mouse_genomes_project 3 64956214 65003143 - Gm37359 antisense antisense MGP_129S1SvImJ_T0001357.1 MGP_129S1SvImJ_G0001281.1 mouse_genomes_project 3 130342770 130346179 - TEC TEC MGP_129S1SvImJ_T0014223.1 MGP_129S1SvImJ_G0012312.1 mouse_genomes_project 3 101119500 101119815 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001282.1 MGP_129S1SvImJ_G0001206.1 mouse_genomes_project 3 93882997 93884196 + TEC TEC MGP_129S1SvImJ_T0062148.1 MGP_129S1SvImJ_G0027518.1 mouse_genomes_project 3 93268140 93269741 - MGP_129S1SvImJ_P0062148 Lce1k protein_coding protein_coding MGP_129S1SvImJ_T0061203.1 MGP_129S1SvImJ_G0027301.1 mouse_genomes_project 3 72446780 72457910 - MGP_129S1SvImJ_P0061203 Slitrk3 protein_coding protein_coding MGP_129S1SvImJ_T0061204.1 MGP_129S1SvImJ_G0027301.1 mouse_genomes_project 3 72447711 72458771 - MGP_129S1SvImJ_P0061204 Slitrk3 protein_coding protein_coding MGP_129S1SvImJ_T0013912.1 MGP_129S1SvImJ_G0012001.1 mouse_genomes_project 3 1143335 1143765 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004329.1 MGP_129S1SvImJ_G0003800.1 mouse_genomes_project 3 100334095 100340675 - Gm43120 antisense antisense MGP_129S1SvImJ_T0004311.1 MGP_129S1SvImJ_G0003789.1 mouse_genomes_project 3 96029956 96039418 - 6330562C20Rik antisense antisense MGP_129S1SvImJ_T0004312.1 MGP_129S1SvImJ_G0003789.1 mouse_genomes_project 3 96030545 96039467 - 6330562C20Rik antisense antisense MGP_129S1SvImJ_T0004313.1 MGP_129S1SvImJ_G0003789.1 mouse_genomes_project 3 96035252 96039477 - 6330562C20Rik antisense antisense MGP_129S1SvImJ_T0064252.1 MGP_129S1SvImJ_G0027979.1 mouse_genomes_project 3 150264696 150351011 - MGP_129S1SvImJ_P0064252 Prkacb protein_coding protein_coding MGP_129S1SvImJ_T0064253.1 MGP_129S1SvImJ_G0027979.1 mouse_genomes_project 3 150264987 150305261 - MGP_129S1SvImJ_P0064253 Prkacb protein_coding protein_coding MGP_129S1SvImJ_T0064254.1 MGP_129S1SvImJ_G0027979.1 mouse_genomes_project 3 150264987 150305781 - MGP_129S1SvImJ_P0064254 Prkacb protein_coding protein_coding MGP_129S1SvImJ_T0064255.1 MGP_129S1SvImJ_G0027979.1 mouse_genomes_project 3 150264989 150316413 - MGP_129S1SvImJ_P0064255 Prkacb protein_coding protein_coding MGP_129S1SvImJ_T0064256.1 MGP_129S1SvImJ_G0027979.1 mouse_genomes_project 3 150267450 150280710 - Prkacb protein_coding retained_intron MGP_129S1SvImJ_T0064257.1 MGP_129S1SvImJ_G0027979.1 mouse_genomes_project 3 150283055 150299570 - MGP_129S1SvImJ_P0064257 Prkacb protein_coding protein_coding MGP_129S1SvImJ_T0064258.1 MGP_129S1SvImJ_G0027979.1 mouse_genomes_project 3 150283055 150326891 - MGP_129S1SvImJ_P0064258 Prkacb protein_coding protein_coding MGP_129S1SvImJ_T0064259.1 MGP_129S1SvImJ_G0027979.1 mouse_genomes_project 3 150347568 150351041 - Prkacb protein_coding retained_intron MGP_129S1SvImJ_T0064395.1 MGP_129S1SvImJ_G0027995.1 mouse_genomes_project 3 156704468 156881539 - MGP_129S1SvImJ_P0064395 St6galnac5 protein_coding protein_coding MGP_129S1SvImJ_T0064396.1 MGP_129S1SvImJ_G0027995.1 mouse_genomes_project 3 156874707 156881345 - St6galnac5 protein_coding processed_transcript MGP_129S1SvImJ_T0018052.1 MGP_129S1SvImJ_G0015529.1 mouse_genomes_project 3 152624908 152626855 + Gm43572 processed_transcript processed_transcript MGP_129S1SvImJ_T0007761.1 MGP_129S1SvImJ_G0006352.1 mouse_genomes_project 3 147607340 147608883 + Gm43447 lincRNA lincRNA MGP_129S1SvImJ_T0062564.1 MGP_129S1SvImJ_G0027617.1 mouse_genomes_project 3 97293744 97302159 - MGP_129S1SvImJ_P0062564 BC107364 protein_coding protein_coding MGP_129S1SvImJ_T0062565.1 MGP_129S1SvImJ_G0027617.1 mouse_genomes_project 3 97293744 97302159 - MGP_129S1SvImJ_P0062565 BC107364 protein_coding protein_coding MGP_129S1SvImJ_T0018022.1 MGP_129S1SvImJ_G0015520.1 mouse_genomes_project 3 117754273 117761582 - A930005H10Rik processed_transcript antisense MGP_129S1SvImJ_T0018023.1 MGP_129S1SvImJ_G0015520.1 mouse_genomes_project 3 117754273 117761618 - A930005H10Rik processed_transcript antisense MGP_129S1SvImJ_T0018024.1 MGP_129S1SvImJ_G0015520.1 mouse_genomes_project 3 117754275 117761441 - A930005H10Rik processed_transcript antisense MGP_129S1SvImJ_T0018025.1 MGP_129S1SvImJ_G0015520.1 mouse_genomes_project 3 117754478 117761592 - A930005H10Rik processed_transcript antisense MGP_129S1SvImJ_T0018026.1 MGP_129S1SvImJ_G0015520.1 mouse_genomes_project 3 117759485 117761585 - A930005H10Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018027.1 MGP_129S1SvImJ_G0015520.1 mouse_genomes_project 3 117759584 117761376 - A930005H10Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018028.1 MGP_129S1SvImJ_G0015520.1 mouse_genomes_project 3 117761310 117761618 - A930005H10Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0062186.1 MGP_129S1SvImJ_G0027545.1 mouse_genomes_project 3 94910208 94915458 + MGP_129S1SvImJ_P0062186 Them5 protein_coding protein_coding MGP_129S1SvImJ_T0062187.1 MGP_129S1SvImJ_G0027545.1 mouse_genomes_project 3 94910368 94915456 + MGP_129S1SvImJ_P0062187 Them5 protein_coding protein_coding MGP_129S1SvImJ_T0061065.1 MGP_129S1SvImJ_G0027267.1 mouse_genomes_project 3 63179041 63206911 - MGP_129S1SvImJ_P0061065 Vmn2r5 protein_coding protein_coding MGP_129S1SvImJ_T0062694.1 MGP_129S1SvImJ_G0027648.1 mouse_genomes_project 3 99145910 99147352 + MGP_129S1SvImJ_P0062694 Adam30 protein_coding protein_coding MGP_129S1SvImJ_T0062695.1 MGP_129S1SvImJ_G0027648.1 mouse_genomes_project 3 99145940 99149449 + MGP_129S1SvImJ_P0062695 Adam30 protein_coding protein_coding MGP_129S1SvImJ_T0063397.1 MGP_129S1SvImJ_G0027814.1 mouse_genomes_project 3 118498329 118530638 + MGP_129S1SvImJ_P0063397 Sass6 protein_coding protein_coding MGP_129S1SvImJ_T0063398.1 MGP_129S1SvImJ_G0027814.1 mouse_genomes_project 3 118498350 118510523 + Sass6 protein_coding processed_transcript MGP_129S1SvImJ_T0063399.1 MGP_129S1SvImJ_G0027814.1 mouse_genomes_project 3 118498359 118540808 + MGP_129S1SvImJ_P0063399 Sass6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063400.1 MGP_129S1SvImJ_G0027814.1 mouse_genomes_project 3 118498424 118538606 + MGP_129S1SvImJ_P0063400 Sass6 protein_coding protein_coding MGP_129S1SvImJ_T0063402.1 MGP_129S1SvImJ_G0027814.1 mouse_genomes_project 3 118522374 118528291 + Sass6 protein_coding processed_transcript MGP_129S1SvImJ_T0063404.1 MGP_129S1SvImJ_G0027814.1 mouse_genomes_project 3 118530494 118537358 + Sass6 protein_coding retained_intron MGP_129S1SvImJ_T0063405.1 MGP_129S1SvImJ_G0027814.1 mouse_genomes_project 3 118535740 118538924 + Sass6 protein_coding retained_intron MGP_129S1SvImJ_T0062154.1 MGP_129S1SvImJ_G0027524.1 mouse_genomes_project 3 93422248 93423930 + MGP_129S1SvImJ_P0062154 protein_coding protein_coding MGP_129S1SvImJ_T0004252.1 MGP_129S1SvImJ_G0003745.1 mouse_genomes_project 3 50479788 50489949 + Gm20089 antisense antisense MGP_129S1SvImJ_T0001147.1 MGP_129S1SvImJ_G0001073.1 mouse_genomes_project 3 27625786 27627420 - TEC TEC MGP_129S1SvImJ_T0004257.1 MGP_129S1SvImJ_G0003749.1 mouse_genomes_project 3 52049594 52054820 + Gm16206 antisense antisense MGP_129S1SvImJ_T0014299.1 MGP_129S1SvImJ_G0012388.1 mouse_genomes_project 3 124396357 124396769 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102473.1 MGP_129S1SvImJ_G0040307.1 mouse_genomes_project 3 90404319 90404610 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0001368.1 MGP_129S1SvImJ_G0001291.1 mouse_genomes_project 3 133452556 133454909 - TEC TEC MGP_129S1SvImJ_T0001263.1 MGP_129S1SvImJ_G0001187.1 mouse_genomes_project 3 75092120 75097703 + TEC TEC MGP_129S1SvImJ_T0064067.1 MGP_129S1SvImJ_G0027939.1 mouse_genomes_project 3 144986912 145034798 - MGP_129S1SvImJ_P0064067 Bmpr1b protein_coding protein_coding MGP_129S1SvImJ_T0064068.1 MGP_129S1SvImJ_G0027939.1 mouse_genomes_project 3 144990090 145090293 - MGP_129S1SvImJ_P0064068 Bmpr1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0014109.1 MGP_129S1SvImJ_G0012198.1 mouse_genomes_project 3 66019994 66020783 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004404.1 MGP_129S1SvImJ_G0003847.1 mouse_genomes_project 3 141145353 141158180 + Gm43691 antisense antisense MGP_129S1SvImJ_T0004413.1 MGP_129S1SvImJ_G0003853.1 mouse_genomes_project 3 148138245 148154167 + antisense antisense MGP_129S1SvImJ_T0062955.1 MGP_129S1SvImJ_G0027707.1 mouse_genomes_project 3 105947642 105969667 + MGP_129S1SvImJ_P0062955 Slc16a1 protein_coding protein_coding MGP_129S1SvImJ_T0014293.1 MGP_129S1SvImJ_G0012382.1 mouse_genomes_project 3 123351465 123352460 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062172.1 MGP_129S1SvImJ_G0027535.1 mouse_genomes_project 3 93959935 93963162 + MGP_129S1SvImJ_P0062172 Tchhl1 protein_coding protein_coding MGP_129S1SvImJ_T0061707.1 MGP_129S1SvImJ_G0027409.1 mouse_genomes_project 3 88981444 89076095 + MGP_129S1SvImJ_P0061707 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0098577.1 MGP_129S1SvImJ_G0036662.1 mouse_genomes_project 3 22780865 22780973 + Gm22832 rRNA rRNA MGP_129S1SvImJ_T0060099.1 MGP_129S1SvImJ_G0027076.1 mouse_genomes_project 3 11772466 11793616 + MGP_129S1SvImJ_P0060099 Car13 protein_coding protein_coding MGP_129S1SvImJ_T0061444.1 MGP_129S1SvImJ_G0027360.1 mouse_genomes_project 3 87334886 87347805 - MGP_129S1SvImJ_P0061444 Fcrls protein_coding protein_coding MGP_129S1SvImJ_T0061445.1 MGP_129S1SvImJ_G0027360.1 mouse_genomes_project 3 87343135 87347944 - MGP_129S1SvImJ_P0061445 Fcrls protein_coding protein_coding MGP_129S1SvImJ_T0001338.1 MGP_129S1SvImJ_G0001262.1 mouse_genomes_project 3 129024919 129029424 + TEC TEC MGP_129S1SvImJ_T0001408.1 MGP_129S1SvImJ_G0001331.1 mouse_genomes_project 3 158951892 158955884 + TEC TEC MGP_129S1SvImJ_T0010566.1 MGP_129S1SvImJ_G0008682.1 mouse_genomes_project 3 130035084 130035153 + Mir302a miRNA miRNA MGP_129S1SvImJ_T0004222.1 MGP_129S1SvImJ_G0003723.1 mouse_genomes_project 3 26205101 26211844 - Gm33051 antisense antisense MGP_129S1SvImJ_T0013931.1 MGP_129S1SvImJ_G0012020.1 mouse_genomes_project 3 6916813 6917627 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060718.1 MGP_129S1SvImJ_G0027191.1 mouse_genomes_project 3 48188070 48202079 - MGP_129S1SvImJ_P0060718 Pcdh18 protein_coding protein_coding MGP_129S1SvImJ_T0060719.1 MGP_129S1SvImJ_G0027191.1 mouse_genomes_project 3 48188072 48202048 - MGP_129S1SvImJ_P0060719 Pcdh18 protein_coding protein_coding MGP_129S1SvImJ_T0060720.1 MGP_129S1SvImJ_G0027191.1 mouse_genomes_project 3 48190045 48202088 - Pcdh18 protein_coding processed_transcript MGP_129S1SvImJ_T0060721.1 MGP_129S1SvImJ_G0027191.1 mouse_genomes_project 3 48197183 48200227 - MGP_129S1SvImJ_P0060721 Pcdh18 protein_coding protein_coding MGP_129S1SvImJ_T0060722.1 MGP_129S1SvImJ_G0027191.1 mouse_genomes_project 3 48199588 48202046 - Pcdh18 protein_coding processed_transcript MGP_129S1SvImJ_T0013970.1 MGP_129S1SvImJ_G0012059.1 mouse_genomes_project 3 17629103 17630076 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064302.1 MGP_129S1SvImJ_G0027986.1 mouse_genomes_project 3 155932738 155947763 - Gipc2 protein_coding processed_transcript MGP_129S1SvImJ_T0064303.1 MGP_129S1SvImJ_G0027986.1 mouse_genomes_project 3 155933044 156007649 - MGP_129S1SvImJ_P0064303 Gipc2 protein_coding protein_coding MGP_129S1SvImJ_T0064304.1 MGP_129S1SvImJ_G0027986.1 mouse_genomes_project 3 155933046 155946341 - Gipc2 protein_coding processed_transcript MGP_129S1SvImJ_T0064305.1 MGP_129S1SvImJ_G0027986.1 mouse_genomes_project 3 155933087 155945889 - Gipc2 protein_coding processed_transcript MGP_129S1SvImJ_T0064306.1 MGP_129S1SvImJ_G0027986.1 mouse_genomes_project 3 155933224 155942151 - Gipc2 protein_coding retained_intron MGP_129S1SvImJ_T0064307.1 MGP_129S1SvImJ_G0027986.1 mouse_genomes_project 3 155933399 155985673 - Gipc2 protein_coding processed_transcript MGP_129S1SvImJ_T0064308.1 MGP_129S1SvImJ_G0027986.1 mouse_genomes_project 3 155941133 155947647 - Gipc2 protein_coding retained_intron MGP_129S1SvImJ_T0064309.1 MGP_129S1SvImJ_G0027986.1 mouse_genomes_project 3 155967045 155976767 - Gipc2 protein_coding retained_intron MGP_129S1SvImJ_T0064310.1 MGP_129S1SvImJ_G0027986.1 mouse_genomes_project 3 155969497 156007169 - Gipc2 protein_coding processed_transcript MGP_129S1SvImJ_T0060790.1 MGP_129S1SvImJ_G0027205.1 mouse_genomes_project 3 52045558 52060355 - MGP_129S1SvImJ_P0060790 Nhlrc3 protein_coding protein_coding MGP_129S1SvImJ_T0060791.1 MGP_129S1SvImJ_G0027205.1 mouse_genomes_project 3 52045563 52060346 - MGP_129S1SvImJ_P0060791 Nhlrc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060792.1 MGP_129S1SvImJ_G0027205.1 mouse_genomes_project 3 52055392 52059006 - Nhlrc3 protein_coding retained_intron MGP_129S1SvImJ_T0060793.1 MGP_129S1SvImJ_G0027205.1 mouse_genomes_project 3 52055897 52060274 - Nhlrc3 protein_coding retained_intron MGP_129S1SvImJ_T0060794.1 MGP_129S1SvImJ_G0027205.1 mouse_genomes_project 3 52059085 52060320 - Nhlrc3 protein_coding retained_intron MGP_129S1SvImJ_T0014341.1 MGP_129S1SvImJ_G0012430.1 mouse_genomes_project 3 138365498 138365827 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004334.1 MGP_129S1SvImJ_G0003803.1 mouse_genomes_project 3 103432971 103435187 + Gm16160 antisense antisense MGP_129S1SvImJ_T0013952.1 MGP_129S1SvImJ_G0012041.1 mouse_genomes_project 3 11944856 11945075 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098580.1 MGP_129S1SvImJ_G0036665.1 mouse_genomes_project 3 50322833 50322950 + n-R5s196 rRNA rRNA MGP_129S1SvImJ_T0014373.1 MGP_129S1SvImJ_G0012462.1 mouse_genomes_project 3 148112819 148114494 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062908.1 MGP_129S1SvImJ_G0027700.1 mouse_genomes_project 3 105098225 105130758 + MGP_129S1SvImJ_P0062908 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0007629.1 MGP_129S1SvImJ_G0006240.1 mouse_genomes_project 3 93796422 93956550 - lincRNA lincRNA MGP_129S1SvImJ_T0062671.1 MGP_129S1SvImJ_G0027643.1 mouse_genomes_project 3 98612234 98624843 + MGP_129S1SvImJ_P0062671 Prkab2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062672.1 MGP_129S1SvImJ_G0027643.1 mouse_genomes_project 3 98612253 98627856 + MGP_129S1SvImJ_P0062672 Prkab2 protein_coding protein_coding MGP_129S1SvImJ_T0062673.1 MGP_129S1SvImJ_G0027643.1 mouse_genomes_project 3 98612255 98624977 + MGP_129S1SvImJ_P0062673 Prkab2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062674.1 MGP_129S1SvImJ_G0027643.1 mouse_genomes_project 3 98620573 98627149 + Prkab2 protein_coding retained_intron MGP_129S1SvImJ_T0062675.1 MGP_129S1SvImJ_G0027643.1 mouse_genomes_project 3 98621383 98627125 + Prkab2 protein_coding retained_intron MGP_129S1SvImJ_T0062676.1 MGP_129S1SvImJ_G0027643.1 mouse_genomes_project 3 98624241 98625092 + Prkab2 protein_coding processed_transcript MGP_129S1SvImJ_T0062091.1 MGP_129S1SvImJ_G0027474.1 mouse_genomes_project 3 90933417 90937385 + MGP_129S1SvImJ_P0062091 Gm42674 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0014226.1 MGP_129S1SvImJ_G0012315.1 mouse_genomes_project 3 101802399 101802690 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061566.1 MGP_129S1SvImJ_G0027388.1 mouse_genomes_project 3 88448046 88474524 + MGP_129S1SvImJ_P0061566 Cct3 protein_coding protein_coding MGP_129S1SvImJ_T0061567.1 MGP_129S1SvImJ_G0027388.1 mouse_genomes_project 3 88448047 88449878 + Cct3 protein_coding retained_intron MGP_129S1SvImJ_T0061568.1 MGP_129S1SvImJ_G0027388.1 mouse_genomes_project 3 88448053 88474264 + Cct3 protein_coding retained_intron MGP_129S1SvImJ_T0061569.1 MGP_129S1SvImJ_G0027388.1 mouse_genomes_project 3 88448056 88467164 + Cct3 protein_coding retained_intron MGP_129S1SvImJ_T0061570.1 MGP_129S1SvImJ_G0027388.1 mouse_genomes_project 3 88448083 88474264 + Cct3 protein_coding retained_intron MGP_129S1SvImJ_T0061571.1 MGP_129S1SvImJ_G0027388.1 mouse_genomes_project 3 88448104 88474523 + MGP_129S1SvImJ_P0061571 Cct3 protein_coding protein_coding MGP_129S1SvImJ_T0061572.1 MGP_129S1SvImJ_G0027388.1 mouse_genomes_project 3 88448118 88474264 + MGP_129S1SvImJ_P0061572 Cct3 protein_coding protein_coding MGP_129S1SvImJ_T0061573.1 MGP_129S1SvImJ_G0027388.1 mouse_genomes_project 3 88453768 88473407 + MGP_129S1SvImJ_P0061573 Cct3 protein_coding protein_coding MGP_129S1SvImJ_T0061574.1 MGP_129S1SvImJ_G0027388.1 mouse_genomes_project 3 88473751 88474521 + Cct3 protein_coding retained_intron MGP_129S1SvImJ_T0061575.1 MGP_129S1SvImJ_G0027388.1 mouse_genomes_project 3 88473804 88474522 + MGP_129S1SvImJ_P0061575 Cct3 protein_coding protein_coding MGP_129S1SvImJ_T0007481.1 MGP_129S1SvImJ_G0006132.1 mouse_genomes_project 3 17113634 17114711 + 4632415L05Rik lincRNA lincRNA MGP_129S1SvImJ_T0007482.1 MGP_129S1SvImJ_G0006132.1 mouse_genomes_project 3 17113646 17117567 + 4632415L05Rik lincRNA lincRNA MGP_129S1SvImJ_T0060914.1 MGP_129S1SvImJ_G0027229.1 mouse_genomes_project 3 56245946 56369968 - MGP_129S1SvImJ_P0060914 Wwtr1 protein_coding protein_coding MGP_129S1SvImJ_T0060915.1 MGP_129S1SvImJ_G0027229.1 mouse_genomes_project 3 56246079 56370050 - MGP_129S1SvImJ_P0060915 Wwtr1 protein_coding protein_coding MGP_129S1SvImJ_T0014086.1 MGP_129S1SvImJ_G0012175.1 mouse_genomes_project 3 59680558 59680716 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004367.1 MGP_129S1SvImJ_G0003819.1 mouse_genomes_project 3 111867335 111871027 + C130013H08Rik antisense antisense MGP_129S1SvImJ_T0060483.1 MGP_129S1SvImJ_G0027152.1 mouse_genomes_project 3 33641564 33685349 - MGP_129S1SvImJ_P0060483 Dcun1d1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060484.1 MGP_129S1SvImJ_G0027152.1 mouse_genomes_project 3 33641874 33685300 - MGP_129S1SvImJ_P0060484 Dcun1d1 protein_coding protein_coding MGP_129S1SvImJ_T0060485.1 MGP_129S1SvImJ_G0027152.1 mouse_genomes_project 3 33641900 33673832 - MGP_129S1SvImJ_P0060485 Dcun1d1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060486.1 MGP_129S1SvImJ_G0027152.1 mouse_genomes_project 3 33643576 33684847 - MGP_129S1SvImJ_P0060486 Dcun1d1 protein_coding protein_coding MGP_129S1SvImJ_T0060487.1 MGP_129S1SvImJ_G0027152.1 mouse_genomes_project 3 33643640 33657429 - Dcun1d1 protein_coding processed_transcript MGP_129S1SvImJ_T0060488.1 MGP_129S1SvImJ_G0027152.1 mouse_genomes_project 3 33656729 33685328 - Dcun1d1 protein_coding processed_transcript MGP_129S1SvImJ_T0060489.1 MGP_129S1SvImJ_G0027152.1 mouse_genomes_project 3 33668790 33685337 - Dcun1d1 protein_coding retained_intron MGP_129S1SvImJ_T0060490.1 MGP_129S1SvImJ_G0027152.1 mouse_genomes_project 3 33671642 33682632 - MGP_129S1SvImJ_P0060490 Dcun1d1 protein_coding protein_coding MGP_129S1SvImJ_T0060491.1 MGP_129S1SvImJ_G0027152.1 mouse_genomes_project 3 33671645 33691354 - MGP_129S1SvImJ_P0060491 Dcun1d1 protein_coding protein_coding MGP_129S1SvImJ_T0060492.1 MGP_129S1SvImJ_G0027152.1 mouse_genomes_project 3 33681026 33683971 - Dcun1d1 protein_coding retained_intron MGP_129S1SvImJ_T0001332.1 MGP_129S1SvImJ_G0001256.1 mouse_genomes_project 3 125520441 125523161 - TEC TEC MGP_129S1SvImJ_T0098917.1 MGP_129S1SvImJ_G0036995.1 mouse_genomes_project 3 106867286 106869226 + Gm43847 sense_intronic sense_intronic MGP_129S1SvImJ_T0001294.1 MGP_129S1SvImJ_G0001218.1 mouse_genomes_project 3 98560985 98564887 + TEC TEC MGP_129S1SvImJ_T0099749.1 MGP_129S1SvImJ_G0037816.1 mouse_genomes_project 3 78854973 78855077 + Gm24150 snRNA snRNA MGP_129S1SvImJ_T0014334.1 MGP_129S1SvImJ_G0012423.1 mouse_genomes_project 3 137187337 137187836 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014332.1 MGP_129S1SvImJ_G0012421.1 mouse_genomes_project 3 136988335 136988776 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001314.1 MGP_129S1SvImJ_G0001238.1 mouse_genomes_project 3 120559770 120564054 + TEC TEC MGP_129S1SvImJ_T0061446.1 MGP_129S1SvImJ_G0027361.1 mouse_genomes_project 3 87444227 87457215 + MGP_129S1SvImJ_P0061446 Cd5l protein_coding protein_coding MGP_129S1SvImJ_T0014235.1 MGP_129S1SvImJ_G0012324.1 mouse_genomes_project 3 103919619 103919746 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014325.1 MGP_129S1SvImJ_G0012414.1 mouse_genomes_project 3 133694104 133695405 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098912.1 MGP_129S1SvImJ_G0036990.1 mouse_genomes_project 3 105951977 105954835 + Gm43581 sense_intronic sense_intronic MGP_129S1SvImJ_T0004310.1 MGP_129S1SvImJ_G0003788.1 mouse_genomes_project 3 95923803 95933038 + Gm16740 antisense antisense MGP_129S1SvImJ_T0014348.1 MGP_129S1SvImJ_G0012437.1 mouse_genomes_project 3 139934786 139935102 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098752.1 MGP_129S1SvImJ_G0036837.1 mouse_genomes_project 3 110115129 110115543 - Scarna2 scaRNA scaRNA MGP_129S1SvImJ_T0102506.1 MGP_129S1SvImJ_G0040340.1 mouse_genomes_project 3 114905398 114914328 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0007785.1 MGP_129S1SvImJ_G0006367.1 mouse_genomes_project 3 155113932 155118201 + Gm42949 lincRNA lincRNA MGP_129S1SvImJ_T0010570.1 MGP_129S1SvImJ_G0008686.1 mouse_genomes_project 3 136953506 136953597 - Gm44361 miRNA miRNA MGP_129S1SvImJ_T0018014.1 MGP_129S1SvImJ_G0015517.1 mouse_genomes_project 3 107948055 107951976 - 2010016I18Rik processed_transcript antisense MGP_129S1SvImJ_T0018015.1 MGP_129S1SvImJ_G0015517.1 mouse_genomes_project 3 107948073 107949897 - 2010016I18Rik processed_transcript antisense MGP_129S1SvImJ_T0018016.1 MGP_129S1SvImJ_G0015517.1 mouse_genomes_project 3 107948086 107949511 - 2010016I18Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018017.1 MGP_129S1SvImJ_G0015517.1 mouse_genomes_project 3 107948086 107949524 - 2010016I18Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018018.1 MGP_129S1SvImJ_G0015517.1 mouse_genomes_project 3 107950132 107951911 - 2010016I18Rik processed_transcript retained_intron MGP_129S1SvImJ_T0014067.1 MGP_129S1SvImJ_G0012156.1 mouse_genomes_project 3 56057135 56057764 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061848.1 MGP_129S1SvImJ_G0027432.1 mouse_genomes_project 3 89548929 89560315 - MGP_129S1SvImJ_P0061848 Adam15 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061849.1 MGP_129S1SvImJ_G0027432.1 mouse_genomes_project 3 89550027 89560322 - MGP_129S1SvImJ_P0061849 Adam15 protein_coding protein_coding MGP_129S1SvImJ_T0061850.1 MGP_129S1SvImJ_G0027432.1 mouse_genomes_project 3 89550027 89560329 - MGP_129S1SvImJ_P0061850 Adam15 protein_coding protein_coding MGP_129S1SvImJ_T0061851.1 MGP_129S1SvImJ_G0027432.1 mouse_genomes_project 3 89550028 89551545 - Adam15 protein_coding processed_transcript MGP_129S1SvImJ_T0061852.1 MGP_129S1SvImJ_G0027432.1 mouse_genomes_project 3 89550031 89550828 - Adam15 protein_coding processed_transcript MGP_129S1SvImJ_T0061853.1 MGP_129S1SvImJ_G0027432.1 mouse_genomes_project 3 89550031 89560292 - MGP_129S1SvImJ_P0061853 Adam15 protein_coding protein_coding MGP_129S1SvImJ_T0061854.1 MGP_129S1SvImJ_G0027432.1 mouse_genomes_project 3 89550035 89560308 - MGP_129S1SvImJ_P0061854 Adam15 protein_coding protein_coding MGP_129S1SvImJ_T0061855.1 MGP_129S1SvImJ_G0027432.1 mouse_genomes_project 3 89550132 89550740 - Adam15 protein_coding retained_intron MGP_129S1SvImJ_T0061856.1 MGP_129S1SvImJ_G0027432.1 mouse_genomes_project 3 89550302 89551307 - Adam15 protein_coding retained_intron MGP_129S1SvImJ_T0061857.1 MGP_129S1SvImJ_G0027432.1 mouse_genomes_project 3 89550461 89554067 - Adam15 protein_coding retained_intron MGP_129S1SvImJ_T0061858.1 MGP_129S1SvImJ_G0027432.1 mouse_genomes_project 3 89553119 89560307 - Adam15 protein_coding retained_intron MGP_129S1SvImJ_T0061859.1 MGP_129S1SvImJ_G0027432.1 mouse_genomes_project 3 89556860 89560293 - Adam15 protein_coding retained_intron MGP_129S1SvImJ_T0061860.1 MGP_129S1SvImJ_G0027432.1 mouse_genomes_project 3 89558850 89559440 - Adam15 protein_coding processed_transcript MGP_129S1SvImJ_T0101057.1 MGP_129S1SvImJ_G0039124.1 mouse_genomes_project 3 109992539 109992663 + Gm22942 snoRNA snoRNA MGP_129S1SvImJ_T0004320.1 MGP_129S1SvImJ_G0003793.1 mouse_genomes_project 3 97050301 97053214 - Gm20633 antisense antisense MGP_129S1SvImJ_T0001136.1 MGP_129S1SvImJ_G0001062.1 mouse_genomes_project 3 15471977 15476806 + TEC TEC MGP_129S1SvImJ_T0060300.1 MGP_129S1SvImJ_G0027120.1 mouse_genomes_project 3 27407578 27473287 - MGP_129S1SvImJ_P0060300 Mecom protein_coding protein_coding MGP_129S1SvImJ_T0060301.1 MGP_129S1SvImJ_G0027120.1 mouse_genomes_project 3 27407581 28002615 - MGP_129S1SvImJ_P0060301 Mecom protein_coding protein_coding MGP_129S1SvImJ_T0060302.1 MGP_129S1SvImJ_G0027120.1 mouse_genomes_project 3 27407588 27473618 - MGP_129S1SvImJ_P0060302 Mecom protein_coding protein_coding MGP_129S1SvImJ_T0060303.1 MGP_129S1SvImJ_G0027120.1 mouse_genomes_project 3 27407589 27606008 - MGP_129S1SvImJ_P0060303 Mecom protein_coding protein_coding MGP_129S1SvImJ_T0060304.1 MGP_129S1SvImJ_G0027120.1 mouse_genomes_project 3 27408849 27709897 - MGP_129S1SvImJ_P0060304 Mecom protein_coding protein_coding MGP_129S1SvImJ_T0060305.1 MGP_129S1SvImJ_G0027120.1 mouse_genomes_project 3 27408998 27457154 - MGP_129S1SvImJ_P0060305 Mecom protein_coding protein_coding MGP_129S1SvImJ_T0060306.1 MGP_129S1SvImJ_G0027120.1 mouse_genomes_project 3 27409064 27457193 - MGP_129S1SvImJ_P0060306 Mecom protein_coding protein_coding MGP_129S1SvImJ_T0060307.1 MGP_129S1SvImJ_G0027120.1 mouse_genomes_project 3 27419356 28002396 - MGP_129S1SvImJ_P0060307 Mecom protein_coding protein_coding MGP_129S1SvImJ_T0060308.1 MGP_129S1SvImJ_G0027120.1 mouse_genomes_project 3 27421738 28002704 - MGP_129S1SvImJ_P0060308 Mecom protein_coding protein_coding MGP_129S1SvImJ_T0060309.1 MGP_129S1SvImJ_G0027120.1 mouse_genomes_project 3 27433624 28043200 - MGP_129S1SvImJ_P0060309 Mecom protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060310.1 MGP_129S1SvImJ_G0027120.1 mouse_genomes_project 3 27440237 27473192 - Mecom protein_coding processed_transcript MGP_129S1SvImJ_T0060311.1 MGP_129S1SvImJ_G0027120.1 mouse_genomes_project 3 27440237 27473335 - Mecom protein_coding retained_intron MGP_129S1SvImJ_T0060312.1 MGP_129S1SvImJ_G0027120.1 mouse_genomes_project 3 27457219 27471570 - MGP_129S1SvImJ_P0060312 Mecom protein_coding protein_coding MGP_129S1SvImJ_T0060313.1 MGP_129S1SvImJ_G0027120.1 mouse_genomes_project 3 27476252 28002615 - Mecom protein_coding processed_transcript MGP_129S1SvImJ_T0060314.1 MGP_129S1SvImJ_G0027120.1 mouse_genomes_project 3 27707177 27709695 - Mecom protein_coding retained_intron MGP_129S1SvImJ_T0060315.1 MGP_129S1SvImJ_G0027120.1 mouse_genomes_project 3 27708303 28002369 - Mecom protein_coding processed_transcript MGP_129S1SvImJ_T0060316.1 MGP_129S1SvImJ_G0027120.1 mouse_genomes_project 3 27709706 27710054 - MGP_129S1SvImJ_P0060316 Mecom protein_coding protein_coding MGP_129S1SvImJ_T0014203.1 MGP_129S1SvImJ_G0012292.1 mouse_genomes_project 3 96191551 96191903 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061305.1 MGP_129S1SvImJ_G0027323.1 mouse_genomes_project 3 81751815 81771560 - MGP_129S1SvImJ_P0061305 Tdo2 protein_coding protein_coding MGP_129S1SvImJ_T0061306.1 MGP_129S1SvImJ_G0027323.1 mouse_genomes_project 3 81753453 81758771 - Tdo2 protein_coding processed_transcript MGP_129S1SvImJ_T0061307.1 MGP_129S1SvImJ_G0027323.1 mouse_genomes_project 3 81753520 81771560 - MGP_129S1SvImJ_P0061307 Tdo2 protein_coding protein_coding MGP_129S1SvImJ_T0061308.1 MGP_129S1SvImJ_G0027323.1 mouse_genomes_project 3 81755750 81758723 - Tdo2 protein_coding retained_intron MGP_129S1SvImJ_T0007659.1 MGP_129S1SvImJ_G0006268.1 mouse_genomes_project 3 107101215 107102462 - Gm43848 lincRNA lincRNA MGP_129S1SvImJ_T0062587.1 MGP_129S1SvImJ_G0027626.1 mouse_genomes_project 3 97522255 97539909 + MGP_129S1SvImJ_P0062587 Gm42957 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0001297.1 MGP_129S1SvImJ_G0001221.1 mouse_genomes_project 3 105979537 105982522 - TEC TEC MGP_129S1SvImJ_T0001231.1 MGP_129S1SvImJ_G0001155.1 mouse_genomes_project 3 51691541 51691997 + TEC TEC MGP_129S1SvImJ_T0061561.1 MGP_129S1SvImJ_G0027385.1 mouse_genomes_project 3 88391151 88402987 - MGP_129S1SvImJ_P0061561 Rhbg protein_coding protein_coding MGP_129S1SvImJ_T0014361.1 MGP_129S1SvImJ_G0012450.1 mouse_genomes_project 3 143658145 143658695 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014238.1 MGP_129S1SvImJ_G0012327.1 mouse_genomes_project 3 104428236 104428991 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063551.1 MGP_129S1SvImJ_G0027842.1 mouse_genomes_project 3 125185654 125190087 + MGP_129S1SvImJ_P0063551 Fabp2 protein_coding protein_coding MGP_129S1SvImJ_T0102481.1 MGP_129S1SvImJ_G0040315.1 mouse_genomes_project 3 94262673 94297885 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0062139.1 MGP_129S1SvImJ_G0027510.1 mouse_genomes_project 3 93143631 93145343 - MGP_129S1SvImJ_P0062139 Lce1d protein_coding protein_coding MGP_129S1SvImJ_T0014266.1 MGP_129S1SvImJ_G0012355.1 mouse_genomes_project 3 113005239 113006767 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101702.1 MGP_129S1SvImJ_G0039711.1 mouse_genomes_project 3 146116969 146117488 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0062128.1 MGP_129S1SvImJ_G0027501.1 mouse_genomes_project 3 92984465 92986472 - MGP_129S1SvImJ_P0062128 2310046K23Rik protein_coding protein_coding MGP_129S1SvImJ_T0014217.1 MGP_129S1SvImJ_G0012306.1 mouse_genomes_project 3 99888303 99888558 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063263.1 MGP_129S1SvImJ_G0027786.1 mouse_genomes_project 3 110374399 110421641 - MGP_129S1SvImJ_P0063263 Stxbp3 protein_coding protein_coding MGP_129S1SvImJ_T0063264.1 MGP_129S1SvImJ_G0027786.1 mouse_genomes_project 3 110375651 110383797 - Stxbp3 protein_coding retained_intron MGP_129S1SvImJ_T0063265.1 MGP_129S1SvImJ_G0027786.1 mouse_genomes_project 3 110376095 110379047 - Stxbp3 protein_coding retained_intron MGP_129S1SvImJ_T0063266.1 MGP_129S1SvImJ_G0027786.1 mouse_genomes_project 3 110381374 110386994 - Stxbp3 protein_coding retained_intron MGP_129S1SvImJ_T0063267.1 MGP_129S1SvImJ_G0027786.1 mouse_genomes_project 3 110391222 110421581 - MGP_129S1SvImJ_P0063267 Stxbp3 protein_coding protein_coding MGP_129S1SvImJ_T0063268.1 MGP_129S1SvImJ_G0027786.1 mouse_genomes_project 3 110402030 110421645 - Stxbp3 protein_coding processed_transcript MGP_129S1SvImJ_T0063269.1 MGP_129S1SvImJ_G0027786.1 mouse_genomes_project 3 110404760 110421656 - MGP_129S1SvImJ_P0063269 Stxbp3 protein_coding protein_coding MGP_129S1SvImJ_T0063270.1 MGP_129S1SvImJ_G0027786.1 mouse_genomes_project 3 110405841 110421640 - MGP_129S1SvImJ_P0063270 Stxbp3 protein_coding protein_coding MGP_129S1SvImJ_T0014274.1 MGP_129S1SvImJ_G0012363.1 mouse_genomes_project 3 114806482 114807312 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063348.1 MGP_129S1SvImJ_G0027804.1 mouse_genomes_project 3 117761325 117791607 + MGP_129S1SvImJ_P0063348 Dph5 protein_coding protein_coding MGP_129S1SvImJ_T0063349.1 MGP_129S1SvImJ_G0027804.1 mouse_genomes_project 3 117761340 117761967 + MGP_129S1SvImJ_P0063349 Dph5 protein_coding protein_coding MGP_129S1SvImJ_T0063350.1 MGP_129S1SvImJ_G0027804.1 mouse_genomes_project 3 117761634 117773278 + MGP_129S1SvImJ_P0063350 Dph5 protein_coding protein_coding MGP_129S1SvImJ_T0063351.1 MGP_129S1SvImJ_G0027804.1 mouse_genomes_project 3 117761652 117801562 + MGP_129S1SvImJ_P0063351 Dph5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063352.1 MGP_129S1SvImJ_G0027804.1 mouse_genomes_project 3 117761660 117774642 + MGP_129S1SvImJ_P0063352 Dph5 protein_coding protein_coding MGP_129S1SvImJ_T0063353.1 MGP_129S1SvImJ_G0027804.1 mouse_genomes_project 3 117761670 117791810 + MGP_129S1SvImJ_P0063353 Dph5 protein_coding protein_coding MGP_129S1SvImJ_T0063354.1 MGP_129S1SvImJ_G0027804.1 mouse_genomes_project 3 117761681 117765759 + Dph5 protein_coding retained_intron MGP_129S1SvImJ_T0063355.1 MGP_129S1SvImJ_G0027804.1 mouse_genomes_project 3 117761682 117766472 + Dph5 protein_coding retained_intron MGP_129S1SvImJ_T0062266.1 MGP_129S1SvImJ_G0027561.1 mouse_genomes_project 3 95555149 95558018 - MGP_129S1SvImJ_P0062266 Psmb4 protein_coding protein_coding MGP_129S1SvImJ_T0062267.1 MGP_129S1SvImJ_G0027561.1 mouse_genomes_project 3 95555378 95555900 - Psmb4 protein_coding retained_intron MGP_129S1SvImJ_T0062268.1 MGP_129S1SvImJ_G0027561.1 mouse_genomes_project 3 95555954 95557919 - Psmb4 protein_coding retained_intron MGP_129S1SvImJ_T0062269.1 MGP_129S1SvImJ_G0027561.1 mouse_genomes_project 3 95555973 95557802 - Psmb4 protein_coding retained_intron MGP_129S1SvImJ_T0062270.1 MGP_129S1SvImJ_G0027561.1 mouse_genomes_project 3 95556363 95557012 - Psmb4 protein_coding retained_intron MGP_129S1SvImJ_T0001192.1 MGP_129S1SvImJ_G0001118.1 mouse_genomes_project 3 43610041 43613487 + TEC TEC MGP_129S1SvImJ_T0062114.1 MGP_129S1SvImJ_G0027488.1 mouse_genomes_project 3 92747929 92749395 + MGP_129S1SvImJ_P0062114 Sprr2b protein_coding protein_coding MGP_129S1SvImJ_T0063692.1 MGP_129S1SvImJ_G0027865.1 mouse_genomes_project 3 130301326 130309879 + MGP_129S1SvImJ_P0063692 Tifa protein_coding protein_coding MGP_129S1SvImJ_T0063693.1 MGP_129S1SvImJ_G0027865.1 mouse_genomes_project 3 130301431 130345372 + Tifa protein_coding processed_transcript MGP_129S1SvImJ_T0063694.1 MGP_129S1SvImJ_G0027865.1 mouse_genomes_project 3 130301433 130309448 + MGP_129S1SvImJ_P0063694 Tifa protein_coding protein_coding MGP_129S1SvImJ_T0063695.1 MGP_129S1SvImJ_G0027865.1 mouse_genomes_project 3 130302163 130309448 + MGP_129S1SvImJ_P0063695 Tifa protein_coding protein_coding MGP_129S1SvImJ_T0063696.1 MGP_129S1SvImJ_G0027865.1 mouse_genomes_project 3 130302312 130309879 + MGP_129S1SvImJ_P0063696 Tifa protein_coding protein_coding MGP_129S1SvImJ_T0013915.1 MGP_129S1SvImJ_G0012004.1 mouse_genomes_project 3 2957171 2960101 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060347.1 MGP_129S1SvImJ_G0027129.1 mouse_genomes_project 3 28406198 28481712 - MGP_129S1SvImJ_P0060347 Phc3 protein_coding protein_coding MGP_129S1SvImJ_T0060348.1 MGP_129S1SvImJ_G0027129.1 mouse_genomes_project 3 28406351 28481716 - MGP_129S1SvImJ_P0060348 Phc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060349.1 MGP_129S1SvImJ_G0027129.1 mouse_genomes_project 3 28413611 28481716 - MGP_129S1SvImJ_P0060349 Phc3 protein_coding protein_coding MGP_129S1SvImJ_T0060350.1 MGP_129S1SvImJ_G0027129.1 mouse_genomes_project 3 28413812 28481716 - MGP_129S1SvImJ_P0060350 Phc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060351.1 MGP_129S1SvImJ_G0027129.1 mouse_genomes_project 3 28414138 28481710 - MGP_129S1SvImJ_P0060351 Phc3 protein_coding protein_coding MGP_129S1SvImJ_T0060352.1 MGP_129S1SvImJ_G0027129.1 mouse_genomes_project 3 28414138 28481710 - MGP_129S1SvImJ_P0060352 Phc3 protein_coding protein_coding MGP_129S1SvImJ_T0060353.1 MGP_129S1SvImJ_G0027129.1 mouse_genomes_project 3 28414138 28481710 - MGP_129S1SvImJ_P0060353 Phc3 protein_coding protein_coding MGP_129S1SvImJ_T0060354.1 MGP_129S1SvImJ_G0027129.1 mouse_genomes_project 3 28430209 28443681 - Phc3 protein_coding retained_intron MGP_129S1SvImJ_T0060355.1 MGP_129S1SvImJ_G0027129.1 mouse_genomes_project 3 28439655 28481726 - MGP_129S1SvImJ_P0060355 Phc3 protein_coding protein_coding MGP_129S1SvImJ_T0060356.1 MGP_129S1SvImJ_G0027129.1 mouse_genomes_project 3 28470705 28478245 - Phc3 protein_coding retained_intron MGP_129S1SvImJ_T0010554.1 MGP_129S1SvImJ_G0008670.1 mouse_genomes_project 3 100265731 100265841 - Mir6481 miRNA miRNA MGP_129S1SvImJ_T0062256.1 MGP_129S1SvImJ_G0027560.1 mouse_genomes_project 3 95503265 95553383 + MGP_129S1SvImJ_P0062256 Pogz protein_coding protein_coding MGP_129S1SvImJ_T0062257.1 MGP_129S1SvImJ_G0027560.1 mouse_genomes_project 3 95503308 95532610 + Pogz protein_coding processed_transcript MGP_129S1SvImJ_T0062258.1 MGP_129S1SvImJ_G0027560.1 mouse_genomes_project 3 95503324 95537540 + Pogz protein_coding retained_intron MGP_129S1SvImJ_T0062259.1 MGP_129S1SvImJ_G0027560.1 mouse_genomes_project 3 95503324 95553381 + MGP_129S1SvImJ_P0062259 Pogz protein_coding protein_coding MGP_129S1SvImJ_T0062260.1 MGP_129S1SvImJ_G0027560.1 mouse_genomes_project 3 95503324 95551389 + MGP_129S1SvImJ_P0062260 Pogz protein_coding protein_coding MGP_129S1SvImJ_T0062261.1 MGP_129S1SvImJ_G0027560.1 mouse_genomes_project 3 95503324 95551932 + MGP_129S1SvImJ_P0062261 Pogz protein_coding protein_coding MGP_129S1SvImJ_T0062262.1 MGP_129S1SvImJ_G0027560.1 mouse_genomes_project 3 95534745 95535568 + Pogz protein_coding retained_intron MGP_129S1SvImJ_T0062263.1 MGP_129S1SvImJ_G0027560.1 mouse_genomes_project 3 95535536 95543341 + MGP_129S1SvImJ_P0062263 Pogz protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062264.1 MGP_129S1SvImJ_G0027560.1 mouse_genomes_project 3 95542350 95544748 + Pogz protein_coding processed_transcript MGP_129S1SvImJ_T0062265.1 MGP_129S1SvImJ_G0027560.1 mouse_genomes_project 3 95548711 95550023 + Pogz protein_coding retained_intron MGP_129S1SvImJ_T0099751.1 MGP_129S1SvImJ_G0037818.1 mouse_genomes_project 3 83560843 83560950 + Gm24584 snRNA snRNA MGP_129S1SvImJ_T0063685.1 MGP_129S1SvImJ_G0027863.1 mouse_genomes_project 3 130137876 130140372 + MGP_129S1SvImJ_P0063685 Neurog2 protein_coding protein_coding MGP_129S1SvImJ_T0063153.1 MGP_129S1SvImJ_G0027761.1 mouse_genomes_project 3 109509389 109514357 - MGP_129S1SvImJ_P0063153 protein_coding protein_coding MGP_129S1SvImJ_T0063154.1 MGP_129S1SvImJ_G0027761.1 mouse_genomes_project 3 109509742 109514264 - MGP_129S1SvImJ_P0063154 protein_coding protein_coding MGP_129S1SvImJ_T0063155.1 MGP_129S1SvImJ_G0027761.1 mouse_genomes_project 3 109512964 109514325 - protein_coding retained_intron MGP_129S1SvImJ_T0063156.1 MGP_129S1SvImJ_G0027761.1 mouse_genomes_project 3 109513385 109514325 - protein_coding retained_intron MGP_129S1SvImJ_T0062640.1 MGP_129S1SvImJ_G0027636.1 mouse_genomes_project 3 97809462 97987755 + MGP_129S1SvImJ_P0062640 Gja5 protein_coding protein_coding MGP_129S1SvImJ_T0062642.1 MGP_129S1SvImJ_G0027636.1 mouse_genomes_project 3 97941118 97961208 + MGP_129S1SvImJ_P0062642 Gja5 protein_coding protein_coding MGP_129S1SvImJ_T0062643.1 MGP_129S1SvImJ_G0027636.1 mouse_genomes_project 3 97941118 97963964 + MGP_129S1SvImJ_P0062643 Gja5 protein_coding protein_coding MGP_129S1SvImJ_T0007532.1 MGP_129S1SvImJ_G0006173.1 mouse_genomes_project 3 39352653 39367733 + Gm30852 lincRNA lincRNA MGP_129S1SvImJ_T0007533.1 MGP_129S1SvImJ_G0006173.1 mouse_genomes_project 3 39366217 39392994 + Gm30852 lincRNA lincRNA MGP_129S1SvImJ_T0063007.1 MGP_129S1SvImJ_G0027722.1 mouse_genomes_project 3 107254373 107256103 + Tmigd3 protein_coding processed_transcript MGP_129S1SvImJ_T0063008.1 MGP_129S1SvImJ_G0027722.1 mouse_genomes_project 3 107254377 107310156 + MGP_129S1SvImJ_P0063008 Tmigd3 protein_coding protein_coding MGP_129S1SvImJ_T0063009.1 MGP_129S1SvImJ_G0027722.1 mouse_genomes_project 3 107254377 107310075 + MGP_129S1SvImJ_P0063009 Tmigd3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063010.1 MGP_129S1SvImJ_G0027722.1 mouse_genomes_project 3 107254447 107255333 + Tmigd3 protein_coding processed_transcript MGP_129S1SvImJ_T0063012.1 MGP_129S1SvImJ_G0027722.1 mouse_genomes_project 3 107287334 107304928 + MGP_129S1SvImJ_P0063012 Tmigd3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063014.1 MGP_129S1SvImJ_G0027722.1 mouse_genomes_project 3 107299143 107310159 + MGP_129S1SvImJ_P0063014 Tmigd3 protein_coding protein_coding MGP_129S1SvImJ_T0063015.1 MGP_129S1SvImJ_G0027722.1 mouse_genomes_project 3 107299143 107310162 + MGP_129S1SvImJ_P0063015 Tmigd3 protein_coding protein_coding MGP_129S1SvImJ_T0014144.1 MGP_129S1SvImJ_G0012233.1 mouse_genomes_project 3 77617230 77618642 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064412.1 MGP_129S1SvImJ_G0027999.1 mouse_genomes_project 3 157874546 157879559 - MGP_129S1SvImJ_P0064412 Rabggtb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064413.1 MGP_129S1SvImJ_G0027999.1 mouse_genomes_project 3 157874548 157880257 - MGP_129S1SvImJ_P0064413 Rabggtb protein_coding protein_coding MGP_129S1SvImJ_T0064414.1 MGP_129S1SvImJ_G0027999.1 mouse_genomes_project 3 157874548 157879393 - MGP_129S1SvImJ_P0064414 Rabggtb protein_coding protein_coding MGP_129S1SvImJ_T0064415.1 MGP_129S1SvImJ_G0027999.1 mouse_genomes_project 3 157874550 157880175 - MGP_129S1SvImJ_P0064415 Rabggtb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064416.1 MGP_129S1SvImJ_G0027999.1 mouse_genomes_project 3 157874552 157880241 - MGP_129S1SvImJ_P0064416 Rabggtb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064417.1 MGP_129S1SvImJ_G0027999.1 mouse_genomes_project 3 157874713 157879329 - MGP_129S1SvImJ_P0064417 Rabggtb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064418.1 MGP_129S1SvImJ_G0027999.1 mouse_genomes_project 3 157874831 157879329 - MGP_129S1SvImJ_P0064418 Rabggtb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064419.1 MGP_129S1SvImJ_G0027999.1 mouse_genomes_project 3 157874831 157879329 - MGP_129S1SvImJ_P0064419 Rabggtb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064420.1 MGP_129S1SvImJ_G0027999.1 mouse_genomes_project 3 157874831 157879329 - MGP_129S1SvImJ_P0064420 Rabggtb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064421.1 MGP_129S1SvImJ_G0027999.1 mouse_genomes_project 3 157875330 157879281 - MGP_129S1SvImJ_P0064421 Rabggtb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064422.1 MGP_129S1SvImJ_G0027999.1 mouse_genomes_project 3 157876667 157880203 - MGP_129S1SvImJ_P0064422 Rabggtb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064423.1 MGP_129S1SvImJ_G0027999.1 mouse_genomes_project 3 157879233 157880179 - Rabggtb protein_coding processed_transcript MGP_129S1SvImJ_T0001346.1 MGP_129S1SvImJ_G0001270.1 mouse_genomes_project 3 129410742 129412379 - TEC TEC MGP_129S1SvImJ_T0099724.1 MGP_129S1SvImJ_G0037791.1 mouse_genomes_project 3 30654994 30655151 + Gm23214 snRNA snRNA MGP_129S1SvImJ_T0013955.1 MGP_129S1SvImJ_G0012044.1 mouse_genomes_project 3 13169187 13170248 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010527.1 MGP_129S1SvImJ_G0008643.1 mouse_genomes_project 3 45154145 45154260 - Mir6379 miRNA miRNA MGP_129S1SvImJ_T0001281.1 MGP_129S1SvImJ_G0001205.1 mouse_genomes_project 3 93796422 93798945 + TEC TEC MGP_129S1SvImJ_T0062627.1 MGP_129S1SvImJ_G0027634.1 mouse_genomes_project 3 97733303 97755319 + MGP_129S1SvImJ_P0062627 Pdzk1 protein_coding protein_coding MGP_129S1SvImJ_T0062628.1 MGP_129S1SvImJ_G0027634.1 mouse_genomes_project 3 97733482 97755404 + MGP_129S1SvImJ_P0062628 Pdzk1 protein_coding protein_coding MGP_129S1SvImJ_T0062629.1 MGP_129S1SvImJ_G0027634.1 mouse_genomes_project 3 97734095 97774843 + MGP_129S1SvImJ_P0062629 Pdzk1 protein_coding protein_coding MGP_129S1SvImJ_T0062630.1 MGP_129S1SvImJ_G0027634.1 mouse_genomes_project 3 97736173 97774663 + MGP_129S1SvImJ_P0062630 Pdzk1 protein_coding protein_coding MGP_129S1SvImJ_T0062631.1 MGP_129S1SvImJ_G0027634.1 mouse_genomes_project 3 97736190 97774389 + MGP_129S1SvImJ_P0062631 Pdzk1 protein_coding protein_coding MGP_129S1SvImJ_T0062632.1 MGP_129S1SvImJ_G0027634.1 mouse_genomes_project 3 97736190 97774513 + MGP_129S1SvImJ_P0062632 Pdzk1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062633.1 MGP_129S1SvImJ_G0027634.1 mouse_genomes_project 3 97737237 97754043 + MGP_129S1SvImJ_P0062633 Pdzk1 protein_coding protein_coding MGP_129S1SvImJ_T0061301.1 MGP_129S1SvImJ_G0027322.1 mouse_genomes_project 3 81722575 81751428 + MGP_129S1SvImJ_P0061301 Ctso protein_coding protein_coding MGP_129S1SvImJ_T0061302.1 MGP_129S1SvImJ_G0027322.1 mouse_genomes_project 3 81722597 81723299 + Ctso protein_coding retained_intron MGP_129S1SvImJ_T0061303.1 MGP_129S1SvImJ_G0027322.1 mouse_genomes_project 3 81722616 81733015 + Ctso protein_coding processed_transcript MGP_129S1SvImJ_T0061304.1 MGP_129S1SvImJ_G0027322.1 mouse_genomes_project 3 81741469 81749005 + Ctso protein_coding retained_intron MGP_129S1SvImJ_T0063756.1 MGP_129S1SvImJ_G0027877.1 mouse_genomes_project 3 132592883 132607088 + MGP_129S1SvImJ_P0063756 Casp6 protein_coding protein_coding MGP_129S1SvImJ_T0063757.1 MGP_129S1SvImJ_G0027877.1 mouse_genomes_project 3 132592916 132601728 + Casp6 protein_coding processed_transcript MGP_129S1SvImJ_T0063758.1 MGP_129S1SvImJ_G0027877.1 mouse_genomes_project 3 132592959 132596874 + Casp6 protein_coding retained_intron MGP_129S1SvImJ_T0063759.1 MGP_129S1SvImJ_G0027877.1 mouse_genomes_project 3 132603445 132606586 + Casp6 protein_coding retained_intron MGP_129S1SvImJ_T0014283.1 MGP_129S1SvImJ_G0012372.1 mouse_genomes_project 3 118429439 118429881 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064094.1 MGP_129S1SvImJ_G0027945.1 mouse_genomes_project 3 145835007 145854894 + MGP_129S1SvImJ_P0064094 Gbp2 protein_coding protein_coding MGP_129S1SvImJ_T0064095.1 MGP_129S1SvImJ_G0027945.1 mouse_genomes_project 3 145835040 145847472 + MGP_129S1SvImJ_P0064095 Gbp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063589.1 MGP_129S1SvImJ_G0027850.1 mouse_genomes_project 3 125757131 125814373 + MGP_129S1SvImJ_P0063589 Prss12 protein_coding protein_coding MGP_129S1SvImJ_T0099794.1 MGP_129S1SvImJ_G0037861.1 mouse_genomes_project 3 140733489 140733594 + Gm25080 snRNA snRNA MGP_129S1SvImJ_T0063162.1 MGP_129S1SvImJ_G0027764.1 mouse_genomes_project 3 109606659 109618153 - Ampd2 protein_coding retained_intron MGP_129S1SvImJ_T0063163.1 MGP_129S1SvImJ_G0027764.1 mouse_genomes_project 3 109606659 109619225 - MGP_129S1SvImJ_P0063163 Ampd2 protein_coding protein_coding MGP_129S1SvImJ_T0063164.1 MGP_129S1SvImJ_G0027764.1 mouse_genomes_project 3 109606661 109619249 - MGP_129S1SvImJ_P0063164 Ampd2 protein_coding protein_coding MGP_129S1SvImJ_T0063165.1 MGP_129S1SvImJ_G0027764.1 mouse_genomes_project 3 109606684 109617997 - MGP_129S1SvImJ_P0063165 Ampd2 protein_coding protein_coding MGP_129S1SvImJ_T0063166.1 MGP_129S1SvImJ_G0027764.1 mouse_genomes_project 3 109607341 109608068 - Ampd2 protein_coding retained_intron MGP_129S1SvImJ_T0063167.1 MGP_129S1SvImJ_G0027764.1 mouse_genomes_project 3 109607961 109609030 - Ampd2 protein_coding retained_intron MGP_129S1SvImJ_T0063168.1 MGP_129S1SvImJ_G0027764.1 mouse_genomes_project 3 109609210 109610493 - Ampd2 protein_coding retained_intron MGP_129S1SvImJ_T0063169.1 MGP_129S1SvImJ_G0027764.1 mouse_genomes_project 3 109611065 109612307 - Ampd2 protein_coding retained_intron MGP_129S1SvImJ_T0063170.1 MGP_129S1SvImJ_G0027764.1 mouse_genomes_project 3 109611229 109613216 - Ampd2 protein_coding retained_intron MGP_129S1SvImJ_T0063171.1 MGP_129S1SvImJ_G0027764.1 mouse_genomes_project 3 109612519 109617993 - Ampd2 protein_coding retained_intron MGP_129S1SvImJ_T0061214.1 MGP_129S1SvImJ_G0027304.1 mouse_genomes_project 3 74725786 74757330 - MGP_129S1SvImJ_P0061214 Serpini2 protein_coding protein_coding MGP_129S1SvImJ_T0014070.1 MGP_129S1SvImJ_G0012159.1 mouse_genomes_project 3 56506061 56506538 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098907.1 MGP_129S1SvImJ_G0036985.1 mouse_genomes_project 3 105478735 105481165 - Gm43260 sense_intronic sense_intronic MGP_129S1SvImJ_T0060992.1 MGP_129S1SvImJ_G0027251.1 mouse_genomes_project 3 58880547 58900573 + MGP_129S1SvImJ_P0060992 Aadacl2 protein_coding protein_coding MGP_129S1SvImJ_T0007494.1 MGP_129S1SvImJ_G0006144.1 mouse_genomes_project 3 27345802 27378559 + Mannr lincRNA lincRNA MGP_129S1SvImJ_T0007691.1 MGP_129S1SvImJ_G0006291.1 mouse_genomes_project 3 123905804 123915289 - Gm43608 lincRNA lincRNA MGP_129S1SvImJ_T0101049.1 MGP_129S1SvImJ_G0039116.1 mouse_genomes_project 3 96988359 96988486 + Gm22027 snoRNA snoRNA MGP_129S1SvImJ_T0007725.1 MGP_129S1SvImJ_G0006320.1 mouse_genomes_project 3 137293733 137481794 - lincRNA lincRNA MGP_129S1SvImJ_T0007523.1 MGP_129S1SvImJ_G0006167.1 mouse_genomes_project 3 36248777 36253040 + Gm42920 lincRNA lincRNA MGP_129S1SvImJ_T0098875.1 MGP_129S1SvImJ_G0036953.1 mouse_genomes_project 3 95155441 95156696 - Gm43768 sense_intronic sense_intronic MGP_129S1SvImJ_T0004314.1 MGP_129S1SvImJ_G0003790.1 mouse_genomes_project 3 96652584 96671005 + C920021L13Rik antisense antisense MGP_129S1SvImJ_T0004315.1 MGP_129S1SvImJ_G0003790.1 mouse_genomes_project 3 96652587 96672142 + C920021L13Rik antisense antisense MGP_129S1SvImJ_T0004316.1 MGP_129S1SvImJ_G0003790.1 mouse_genomes_project 3 96652593 96656899 + C920021L13Rik antisense antisense MGP_129S1SvImJ_T0101022.1 MGP_129S1SvImJ_G0039089.1 mouse_genomes_project 3 47904103 47904231 + Gm22480 snoRNA snoRNA MGP_129S1SvImJ_T0064461.1 MGP_129S1SvImJ_G0028006.1 mouse_genomes_project 3 158814351 159086482 - MGP_129S1SvImJ_P0064461 Tnni3k protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064462.1 MGP_129S1SvImJ_G0028006.1 mouse_genomes_project 3 158814359 159086482 - MGP_129S1SvImJ_P0064462 Tnni3k protein_coding protein_coding MGP_129S1SvImJ_T0064463.1 MGP_129S1SvImJ_G0028006.1 mouse_genomes_project 3 159061611 159086425 - Tnni3k protein_coding retained_intron MGP_129S1SvImJ_T0001400.1 MGP_129S1SvImJ_G0001323.1 mouse_genomes_project 3 156247183 156248633 - TEC TEC MGP_129S1SvImJ_T0062580.1 MGP_129S1SvImJ_G0027624.1 mouse_genomes_project 3 97515129 97519231 + MGP_129S1SvImJ_P0062580 Rbm8a protein_coding protein_coding MGP_129S1SvImJ_T0062581.1 MGP_129S1SvImJ_G0027624.1 mouse_genomes_project 3 97515136 97519231 + MGP_129S1SvImJ_P0062581 Rbm8a protein_coding protein_coding MGP_129S1SvImJ_T0062582.1 MGP_129S1SvImJ_G0027624.1 mouse_genomes_project 3 97515158 97516932 + MGP_129S1SvImJ_P0062582 Rbm8a protein_coding protein_coding MGP_129S1SvImJ_T0062583.1 MGP_129S1SvImJ_G0027624.1 mouse_genomes_project 3 97515169 97515751 + Rbm8a protein_coding retained_intron MGP_129S1SvImJ_T0062584.1 MGP_129S1SvImJ_G0027624.1 mouse_genomes_project 3 97516418 97517098 + Rbm8a protein_coding retained_intron MGP_129S1SvImJ_T0060780.1 MGP_129S1SvImJ_G0027203.1 mouse_genomes_project 3 51558017 51594311 - MGP_129S1SvImJ_P0060780 Cog6 protein_coding protein_coding MGP_129S1SvImJ_T0060781.1 MGP_129S1SvImJ_G0027203.1 mouse_genomes_project 3 51558264 51571792 - Cog6 protein_coding retained_intron MGP_129S1SvImJ_T0060782.1 MGP_129S1SvImJ_G0027203.1 mouse_genomes_project 3 51560858 51594290 - MGP_129S1SvImJ_P0060782 Cog6 protein_coding protein_coding MGP_129S1SvImJ_T0060783.1 MGP_129S1SvImJ_G0027203.1 mouse_genomes_project 3 51569616 51594292 - MGP_129S1SvImJ_P0060783 Cog6 protein_coding protein_coding MGP_129S1SvImJ_T0060784.1 MGP_129S1SvImJ_G0027203.1 mouse_genomes_project 3 51572889 51594284 - Cog6 protein_coding retained_intron MGP_129S1SvImJ_T0060785.1 MGP_129S1SvImJ_G0027203.1 mouse_genomes_project 3 51587431 51594286 - Cog6 protein_coding retained_intron MGP_129S1SvImJ_T0014012.1 MGP_129S1SvImJ_G0012101.1 mouse_genomes_project 3 35416028 35416349 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063090.1 MGP_129S1SvImJ_G0027744.1 mouse_genomes_project 3 108710878 108717959 - MGP_129S1SvImJ_P0063090 Prok1 protein_coding protein_coding MGP_129S1SvImJ_T0063091.1 MGP_129S1SvImJ_G0027744.1 mouse_genomes_project 3 108710894 108715342 - Prok1 protein_coding retained_intron MGP_129S1SvImJ_T0063092.1 MGP_129S1SvImJ_G0027744.1 mouse_genomes_project 3 108713212 108719014 - MGP_129S1SvImJ_P0063092 Prok1 protein_coding protein_coding MGP_129S1SvImJ_T0098919.1 MGP_129S1SvImJ_G0036997.1 mouse_genomes_project 3 107145407 107148639 - Gm43329 sense_intronic sense_intronic MGP_129S1SvImJ_T0101012.1 MGP_129S1SvImJ_G0039079.1 mouse_genomes_project 3 24413046 24413160 + Gm25152 snoRNA snoRNA MGP_129S1SvImJ_T0001391.1 MGP_129S1SvImJ_G0001314.1 mouse_genomes_project 3 150947670 150956449 - TEC TEC MGP_129S1SvImJ_T0010513.1 MGP_129S1SvImJ_G0008629.1 mouse_genomes_project 3 23924684 23924811 - Gm25773 miRNA miRNA MGP_129S1SvImJ_T0098581.1 MGP_129S1SvImJ_G0036666.1 mouse_genomes_project 3 68950925 68951039 + Gm25621 rRNA rRNA MGP_129S1SvImJ_T0007676.1 MGP_129S1SvImJ_G0006281.1 mouse_genomes_project 3 118035806 118053453 + Gm26544 lincRNA lincRNA MGP_129S1SvImJ_T0004302.1 MGP_129S1SvImJ_G0003782.1 mouse_genomes_project 3 92536145 92542271 + Gm43735 antisense antisense MGP_129S1SvImJ_T0060501.1 MGP_129S1SvImJ_G0027154.1 mouse_genomes_project 3 33764657 33818711 - MGP_129S1SvImJ_P0060501 Ccdc144b protein_coding protein_coding MGP_129S1SvImJ_T0060502.1 MGP_129S1SvImJ_G0027154.1 mouse_genomes_project 3 33769289 33818696 - MGP_129S1SvImJ_P0060502 Ccdc144b protein_coding protein_coding MGP_129S1SvImJ_T0060503.1 MGP_129S1SvImJ_G0027154.1 mouse_genomes_project 3 33772941 33818696 - MGP_129S1SvImJ_P0060503 Ccdc144b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060825.1 MGP_129S1SvImJ_G0027212.1 mouse_genomes_project 3 53389586 53428891 + MGP_129S1SvImJ_P0060825 Supt20 protein_coding protein_coding MGP_129S1SvImJ_T0060826.1 MGP_129S1SvImJ_G0027212.1 mouse_genomes_project 3 53389602 53429017 + MGP_129S1SvImJ_P0060826 Supt20 protein_coding protein_coding MGP_129S1SvImJ_T0060827.1 MGP_129S1SvImJ_G0027212.1 mouse_genomes_project 3 53389602 53429017 + MGP_129S1SvImJ_P0060827 Supt20 protein_coding protein_coding MGP_129S1SvImJ_T0060828.1 MGP_129S1SvImJ_G0027212.1 mouse_genomes_project 3 53389604 53429021 + MGP_129S1SvImJ_P0060828 Supt20 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060829.1 MGP_129S1SvImJ_G0027212.1 mouse_genomes_project 3 53389614 53405969 + MGP_129S1SvImJ_P0060829 Supt20 protein_coding protein_coding MGP_129S1SvImJ_T0060830.1 MGP_129S1SvImJ_G0027212.1 mouse_genomes_project 3 53389637 53411835 + Supt20 protein_coding retained_intron MGP_129S1SvImJ_T0060831.1 MGP_129S1SvImJ_G0027212.1 mouse_genomes_project 3 53389637 53393022 + Supt20 protein_coding retained_intron MGP_129S1SvImJ_T0060832.1 MGP_129S1SvImJ_G0027212.1 mouse_genomes_project 3 53389637 53393986 + Supt20 protein_coding retained_intron MGP_129S1SvImJ_T0060833.1 MGP_129S1SvImJ_G0027212.1 mouse_genomes_project 3 53389641 53406200 + MGP_129S1SvImJ_P0060833 Supt20 protein_coding protein_coding MGP_129S1SvImJ_T0060834.1 MGP_129S1SvImJ_G0027212.1 mouse_genomes_project 3 53389884 53415920 + MGP_129S1SvImJ_P0060834 Supt20 protein_coding protein_coding MGP_129S1SvImJ_T0060835.1 MGP_129S1SvImJ_G0027212.1 mouse_genomes_project 3 53389892 53429018 + MGP_129S1SvImJ_P0060835 Supt20 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060836.1 MGP_129S1SvImJ_G0027212.1 mouse_genomes_project 3 53411320 53413436 + Supt20 protein_coding retained_intron MGP_129S1SvImJ_T0014096.1 MGP_129S1SvImJ_G0012185.1 mouse_genomes_project 3 62881983 62882937 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007484.1 MGP_129S1SvImJ_G0006134.1 mouse_genomes_project 3 17736018 17739125 - Gm31466 lincRNA lincRNA MGP_129S1SvImJ_T0014346.1 MGP_129S1SvImJ_G0012435.1 mouse_genomes_project 3 139279350 139280855 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017983.1 MGP_129S1SvImJ_G0015502.1 mouse_genomes_project 3 43440166 43544902 - processed_transcript lincRNA MGP_129S1SvImJ_T0017984.1 MGP_129S1SvImJ_G0015502.1 mouse_genomes_project 3 43441079 43529407 - processed_transcript lincRNA MGP_129S1SvImJ_T0017985.1 MGP_129S1SvImJ_G0015502.1 mouse_genomes_project 3 43494724 43544847 - processed_transcript retained_intron MGP_129S1SvImJ_T0014131.1 MGP_129S1SvImJ_G0012220.1 mouse_genomes_project 3 71408896 71409401 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099798.1 MGP_129S1SvImJ_G0037865.1 mouse_genomes_project 3 149591476 149591629 - Gm25627 snRNA snRNA MGP_129S1SvImJ_T0014060.1 MGP_129S1SvImJ_G0012149.1 mouse_genomes_project 3 51996644 51997065 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102477.1 MGP_129S1SvImJ_G0040311.1 mouse_genomes_project 3 93542992 93543217 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0004397.1 MGP_129S1SvImJ_G0003843.1 mouse_genomes_project 3 138312773 138316216 - 4930539J05Rik antisense antisense MGP_129S1SvImJ_T0004398.1 MGP_129S1SvImJ_G0003843.1 mouse_genomes_project 3 138312790 138314324 - 4930539J05Rik antisense antisense MGP_129S1SvImJ_T0010544.1 MGP_129S1SvImJ_G0008660.1 mouse_genomes_project 3 90336051 90336131 + Mir190b miRNA miRNA MGP_129S1SvImJ_T0017981.1 MGP_129S1SvImJ_G0015500.1 mouse_genomes_project 3 35163046 35253453 + Gm43439 processed_transcript processed_transcript MGP_129S1SvImJ_T0004259.1 MGP_129S1SvImJ_G0003751.1 mouse_genomes_project 3 54110104 54135818 - Gm42609 antisense antisense MGP_129S1SvImJ_T0004260.1 MGP_129S1SvImJ_G0003751.1 mouse_genomes_project 3 54112905 54133720 - Gm42609 antisense antisense MGP_129S1SvImJ_T0018053.1 MGP_129S1SvImJ_G0015530.1 mouse_genomes_project 3 158345387 158348810 + AI606473 processed_transcript lincRNA MGP_129S1SvImJ_T0018054.1 MGP_129S1SvImJ_G0015530.1 mouse_genomes_project 3 158346553 158347355 + AI606473 processed_transcript retained_intron MGP_129S1SvImJ_T0062915.1 MGP_129S1SvImJ_G0027701.1 mouse_genomes_project 3 105122841 105130758 + MGP_129S1SvImJ_P0062915 Bcl2l15 protein_coding protein_coding MGP_129S1SvImJ_T0062916.1 MGP_129S1SvImJ_G0027701.1 mouse_genomes_project 3 105123011 105148690 + MGP_129S1SvImJ_P0062916 Bcl2l15 protein_coding protein_coding MGP_129S1SvImJ_T0062917.1 MGP_129S1SvImJ_G0027701.1 mouse_genomes_project 3 105123072 105138241 + MGP_129S1SvImJ_P0062917 Bcl2l15 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0062918.1 MGP_129S1SvImJ_G0027701.1 mouse_genomes_project 3 105140964 105147898 + Bcl2l15 protein_coding processed_transcript MGP_129S1SvImJ_T0062919.1 MGP_129S1SvImJ_G0027701.1 mouse_genomes_project 3 105146036 105147731 + Bcl2l15 protein_coding processed_transcript MGP_129S1SvImJ_T0007751.1 MGP_129S1SvImJ_G0006344.1 mouse_genomes_project 3 146908988 146910766 + Gm42704 lincRNA lincRNA MGP_129S1SvImJ_T0061023.1 MGP_129S1SvImJ_G0027257.1 mouse_genomes_project 3 60320347 60324049 - MGP_129S1SvImJ_P0061023 B430305J03Rik protein_coding protein_coding MGP_129S1SvImJ_T0063673.1 MGP_129S1SvImJ_G0027860.1 mouse_genomes_project 3 130026080 130045792 - MGP_129S1SvImJ_P0063673 Larp7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0063674.1 MGP_129S1SvImJ_G0027860.1 mouse_genomes_project 3 130026086 130045898 - MGP_129S1SvImJ_P0063674 Larp7 protein_coding protein_coding MGP_129S1SvImJ_T0063675.1 MGP_129S1SvImJ_G0027860.1 mouse_genomes_project 3 130033750 130037242 - Larp7 protein_coding retained_intron MGP_129S1SvImJ_T0063677.1 MGP_129S1SvImJ_G0027860.1 mouse_genomes_project 3 130036063 130045746 - Larp7 protein_coding retained_intron MGP_129S1SvImJ_T0063678.1 MGP_129S1SvImJ_G0027860.1 mouse_genomes_project 3 130036834 130045896 - MGP_129S1SvImJ_P0063678 Larp7 protein_coding protein_coding MGP_129S1SvImJ_T0060126.1 MGP_129S1SvImJ_G0027085.1 mouse_genomes_project 3 13423143 13461869 + MGP_129S1SvImJ_P0060126 Ythdf3 protein_coding protein_coding MGP_129S1SvImJ_T0060127.1 MGP_129S1SvImJ_G0027085.1 mouse_genomes_project 3 13423167 13444613 + Ythdf3 protein_coding processed_transcript MGP_129S1SvImJ_T0060128.1 MGP_129S1SvImJ_G0027085.1 mouse_genomes_project 3 13423167 13459838 + MGP_129S1SvImJ_P0060128 Ythdf3 protein_coding protein_coding MGP_129S1SvImJ_T0060129.1 MGP_129S1SvImJ_G0027085.1 mouse_genomes_project 3 13423167 13461687 + MGP_129S1SvImJ_P0060129 Ythdf3 protein_coding protein_coding MGP_129S1SvImJ_T0014191.1 MGP_129S1SvImJ_G0012280.1 mouse_genomes_project 3 93767958 93769138 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014298.1 MGP_129S1SvImJ_G0012387.1 mouse_genomes_project 3 124081333 124081710 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010537.1 MGP_129S1SvImJ_G0008653.1 mouse_genomes_project 3 88363511 88363598 + Mir3093 miRNA miRNA MGP_129S1SvImJ_T0010547.1 MGP_129S1SvImJ_G0008663.1 mouse_genomes_project 3 93877332 93877495 + Gm44353 miRNA miRNA MGP_129S1SvImJ_T0001336.1 MGP_129S1SvImJ_G0001260.1 mouse_genomes_project 3 127584397 127590915 - TEC TEC MGP_129S1SvImJ_T0001276.1 MGP_129S1SvImJ_G0001200.1 mouse_genomes_project 3 88167032 88169305 + TEC TEC MGP_129S1SvImJ_T0101681.1 MGP_129S1SvImJ_G0039701.1 mouse_genomes_project 3 18998738 19048680 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101682.1 MGP_129S1SvImJ_G0039701.1 mouse_genomes_project 3 18998817 19010661 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101683.1 MGP_129S1SvImJ_G0039701.1 mouse_genomes_project 3 18999007 18999172 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0061336.1 MGP_129S1SvImJ_G0027332.1 mouse_genomes_project 3 82849374 82855553 + MGP_129S1SvImJ_P0061336 Fga protein_coding protein_coding MGP_129S1SvImJ_T0061337.1 MGP_129S1SvImJ_G0027332.1 mouse_genomes_project 3 82849513 82856916 + MGP_129S1SvImJ_P0061337 Fga protein_coding protein_coding MGP_129S1SvImJ_T0014213.1 MGP_129S1SvImJ_G0012302.1 mouse_genomes_project 3 98034740 98035343 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098922.1 MGP_129S1SvImJ_G0037000.1 mouse_genomes_project 3 107398484 107400007 - Gm42721 sense_intronic sense_intronic MGP_129S1SvImJ_T0060216.1 MGP_129S1SvImJ_G0027105.1 mouse_genomes_project 3 21009578 22020800 - MGP_129S1SvImJ_P0060216 Naaladl2 protein_coding protein_coding MGP_129S1SvImJ_T0060217.1 MGP_129S1SvImJ_G0027105.1 mouse_genomes_project 3 21016677 21149928 - Naaladl2 protein_coding processed_transcript MGP_129S1SvImJ_T0060218.1 MGP_129S1SvImJ_G0027105.1 mouse_genomes_project 3 21017327 21181621 - Naaladl2 protein_coding processed_transcript MGP_129S1SvImJ_T0060219.1 MGP_129S1SvImJ_G0027105.1 mouse_genomes_project 3 21770914 22385176 - Naaladl2 protein_coding retained_intron MGP_129S1SvImJ_T0007598.1 MGP_129S1SvImJ_G0006222.1 mouse_genomes_project 3 82611990 82629090 - Gm43348 lincRNA lincRNA MGP_129S1SvImJ_T0061187.1 MGP_129S1SvImJ_G0027296.1 mouse_genomes_project 3 68835413 68861947 - MGP_129S1SvImJ_P0061187 B3galnt1 protein_coding protein_coding MGP_129S1SvImJ_T0060618.1 MGP_129S1SvImJ_G0027176.1 mouse_genomes_project 3 36781861 36915398 + MGP_129S1SvImJ_P0060618 Fat4 protein_coding protein_coding MGP_129S1SvImJ_T0060619.1 MGP_129S1SvImJ_G0027176.1 mouse_genomes_project 3 36785863 36848948 + Fat4 protein_coding retained_intron MGP_129S1SvImJ_T0062715.1 MGP_129S1SvImJ_G0027659.1 mouse_genomes_project 3 99778103 99804194 - MGP_129S1SvImJ_P0062715 Hsd3b3 protein_coding protein_coding MGP_129S1SvImJ_T0062716.1 MGP_129S1SvImJ_G0027659.1 mouse_genomes_project 3 99779028 99799177 - MGP_129S1SvImJ_P0062716 Hsd3b3 protein_coding protein_coding MGP_129S1SvImJ_T0062717.1 MGP_129S1SvImJ_G0027659.1 mouse_genomes_project 3 99794443 99808403 - Hsd3b3 protein_coding processed_transcript MGP_129S1SvImJ_T0060073.1 MGP_129S1SvImJ_G0027069.1 mouse_genomes_project 3 7355386 7385835 + MGP_129S1SvImJ_P0060073 Chmp4c protein_coding protein_coding MGP_129S1SvImJ_T0060074.1 MGP_129S1SvImJ_G0027069.1 mouse_genomes_project 3 7355437 7421652 + MGP_129S1SvImJ_P0060074 Chmp4c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062157.1 MGP_129S1SvImJ_G0027527.1 mouse_genomes_project 3 93463905 93468848 + MGP_129S1SvImJ_P0062157 protein_coding protein_coding MGP_129S1SvImJ_T0001372.1 MGP_129S1SvImJ_G0001295.1 mouse_genomes_project 3 133923879 133926132 + TEC TEC MGP_129S1SvImJ_T0060467.1 MGP_129S1SvImJ_G0027149.1 mouse_genomes_project 3 31702955 31728226 - MGP_129S1SvImJ_P0060467 Dnajc19 protein_coding protein_coding MGP_129S1SvImJ_T0060468.1 MGP_129S1SvImJ_G0027149.1 mouse_genomes_project 3 31724192 31728235 - MGP_129S1SvImJ_P0060468 Dnajc19 protein_coding protein_coding MGP_129S1SvImJ_T0060469.1 MGP_129S1SvImJ_G0027149.1 mouse_genomes_project 3 31724237 31728224 - MGP_129S1SvImJ_P0060469 Dnajc19 protein_coding protein_coding MGP_129S1SvImJ_T0060470.1 MGP_129S1SvImJ_G0027149.1 mouse_genomes_project 3 31724267 31727094 - Dnajc19 protein_coding retained_intron MGP_129S1SvImJ_T0060471.1 MGP_129S1SvImJ_G0027149.1 mouse_genomes_project 3 31724347 31728176 - MGP_129S1SvImJ_P0060471 Dnajc19 protein_coding protein_coding MGP_129S1SvImJ_T0013924.1 MGP_129S1SvImJ_G0012013.1 mouse_genomes_project 3 5445318 5446548 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001399.1 MGP_129S1SvImJ_G0001322.1 mouse_genomes_project 3 156244232 156246546 - TEC TEC MGP_129S1SvImJ_T0013937.1 MGP_129S1SvImJ_G0012026.1 mouse_genomes_project 3 8043318 8043507 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013910.1 MGP_129S1SvImJ_G0011999.1 mouse_genomes_project 3 954856 956198 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001331.1 MGP_129S1SvImJ_G0001255.1 mouse_genomes_project 3 125506928 125509529 - TEC TEC MGP_129S1SvImJ_T0014043.1 MGP_129S1SvImJ_G0012132.1 mouse_genomes_project 3 47951850 47952411 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001277.1 MGP_129S1SvImJ_G0001201.1 mouse_genomes_project 3 88930623 88931563 - TEC TEC MGP_129S1SvImJ_T0060158.1 MGP_129S1SvImJ_G0027095.1 mouse_genomes_project 3 16849469 16894170 + MGP_129S1SvImJ_P0060158 Trim55 protein_coding protein_coding MGP_129S1SvImJ_T0060159.1 MGP_129S1SvImJ_G0027095.1 mouse_genomes_project 3 16849503 16855044 + Trim55 protein_coding processed_transcript MGP_129S1SvImJ_T0064136.1 MGP_129S1SvImJ_G0027952.1 mouse_genomes_project 3 147992006 148031438 - MGP_129S1SvImJ_P0064136 Sh3glb1 protein_coding protein_coding MGP_129S1SvImJ_T0064137.1 MGP_129S1SvImJ_G0027952.1 mouse_genomes_project 3 147993223 148005795 - MGP_129S1SvImJ_P0064137 Sh3glb1 protein_coding protein_coding MGP_129S1SvImJ_T0064138.1 MGP_129S1SvImJ_G0027952.1 mouse_genomes_project 3 147995239 148031651 - MGP_129S1SvImJ_P0064138 Sh3glb1 protein_coding protein_coding MGP_129S1SvImJ_T0064139.1 MGP_129S1SvImJ_G0027952.1 mouse_genomes_project 3 147997172 148031663 - MGP_129S1SvImJ_P0064139 Sh3glb1 protein_coding protein_coding MGP_129S1SvImJ_T0064140.1 MGP_129S1SvImJ_G0027952.1 mouse_genomes_project 3 147999674 148031533 - MGP_129S1SvImJ_P0064140 Sh3glb1 protein_coding protein_coding MGP_129S1SvImJ_T0064141.1 MGP_129S1SvImJ_G0027952.1 mouse_genomes_project 3 148000306 148014961 - MGP_129S1SvImJ_P0064141 Sh3glb1 protein_coding protein_coding MGP_129S1SvImJ_T0062088.1 MGP_129S1SvImJ_G0027473.1 mouse_genomes_project 3 90920186 90921448 + MGP_129S1SvImJ_P0062088 S100a2 protein_coding protein_coding MGP_129S1SvImJ_T0010538.1 MGP_129S1SvImJ_G0008654.1 mouse_genomes_project 3 88363929 88364037 - Gm25641 miRNA miRNA MGP_129S1SvImJ_T0060428.1 MGP_129S1SvImJ_G0027145.1 mouse_genomes_project 3 30588724 30728111 - MGP_129S1SvImJ_P0060428 Pex5l protein_coding protein_coding MGP_129S1SvImJ_T0060429.1 MGP_129S1SvImJ_G0027145.1 mouse_genomes_project 3 30588724 30727119 - MGP_129S1SvImJ_P0060429 Pex5l protein_coding protein_coding MGP_129S1SvImJ_T0060430.1 MGP_129S1SvImJ_G0027145.1 mouse_genomes_project 3 30588724 30728111 - MGP_129S1SvImJ_P0060430 Pex5l protein_coding protein_coding MGP_129S1SvImJ_T0060431.1 MGP_129S1SvImJ_G0027145.1 mouse_genomes_project 3 30588724 30728111 - MGP_129S1SvImJ_P0060431 Pex5l protein_coding protein_coding MGP_129S1SvImJ_T0060432.1 MGP_129S1SvImJ_G0027145.1 mouse_genomes_project 3 30588724 30728111 - MGP_129S1SvImJ_P0060432 Pex5l protein_coding protein_coding MGP_129S1SvImJ_T0060433.1 MGP_129S1SvImJ_G0027145.1 mouse_genomes_project 3 30588950 30728080 - MGP_129S1SvImJ_P0060433 Pex5l protein_coding protein_coding MGP_129S1SvImJ_T0060434.1 MGP_129S1SvImJ_G0027145.1 mouse_genomes_project 3 30589270 30793309 - MGP_129S1SvImJ_P0060434 Pex5l protein_coding protein_coding MGP_129S1SvImJ_T0060435.1 MGP_129S1SvImJ_G0027145.1 mouse_genomes_project 3 30589270 30728086 - MGP_129S1SvImJ_P0060435 Pex5l protein_coding protein_coding MGP_129S1SvImJ_T0060436.1 MGP_129S1SvImJ_G0027145.1 mouse_genomes_project 3 30589946 30625260 - MGP_129S1SvImJ_P0060436 Pex5l protein_coding protein_coding MGP_129S1SvImJ_T0060437.1 MGP_129S1SvImJ_G0027145.1 mouse_genomes_project 3 30593653 30793474 - Pex5l protein_coding retained_intron MGP_129S1SvImJ_T0060438.1 MGP_129S1SvImJ_G0027145.1 mouse_genomes_project 3 30780354 30793303 - Pex5l protein_coding processed_transcript MGP_129S1SvImJ_T0060439.1 MGP_129S1SvImJ_G0027145.1 mouse_genomes_project 3 30790198 30793410 - Pex5l protein_coding retained_intron MGP_129S1SvImJ_T0063498.1 MGP_129S1SvImJ_G0027834.1 mouse_genomes_project 3 123968006 124026221 - MGP_129S1SvImJ_P0063498 Abcd3 protein_coding protein_coding MGP_129S1SvImJ_T0063499.1 MGP_129S1SvImJ_G0027834.1 mouse_genomes_project 3 123968139 124026357 - MGP_129S1SvImJ_P0063499 Abcd3 protein_coding protein_coding MGP_129S1SvImJ_T0063500.1 MGP_129S1SvImJ_G0027834.1 mouse_genomes_project 3 123968988 124026221 - MGP_129S1SvImJ_P0063500 Abcd3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063501.1 MGP_129S1SvImJ_G0027834.1 mouse_genomes_project 3 123975535 123978000 - Abcd3 protein_coding retained_intron MGP_129S1SvImJ_T0063502.1 MGP_129S1SvImJ_G0027834.1 mouse_genomes_project 3 123995163 124025964 - Abcd3 protein_coding processed_transcript MGP_129S1SvImJ_T0063503.1 MGP_129S1SvImJ_G0027834.1 mouse_genomes_project 3 124005345 124026252 - Abcd3 protein_coding retained_intron MGP_129S1SvImJ_T0064505.1 MGP_129S1SvImJ_G0028015.1 mouse_genomes_project 3 162166862 162194841 - MGP_129S1SvImJ_P0064505 Srsf11 protein_coding protein_coding MGP_129S1SvImJ_T0064506.1 MGP_129S1SvImJ_G0028015.1 mouse_genomes_project 3 162167033 162179698 - Srsf11 protein_coding retained_intron MGP_129S1SvImJ_T0064507.1 MGP_129S1SvImJ_G0028015.1 mouse_genomes_project 3 162167308 162189968 - MGP_129S1SvImJ_P0064507 Srsf11 protein_coding protein_coding MGP_129S1SvImJ_T0064508.1 MGP_129S1SvImJ_G0028015.1 mouse_genomes_project 3 162167892 162179416 - Srsf11 protein_coding retained_intron MGP_129S1SvImJ_T0064509.1 MGP_129S1SvImJ_G0028015.1 mouse_genomes_project 3 162168258 162194753 - MGP_129S1SvImJ_P0064509 Srsf11 protein_coding protein_coding MGP_129S1SvImJ_T0064510.1 MGP_129S1SvImJ_G0028015.1 mouse_genomes_project 3 162168283 162168910 - Srsf11 protein_coding retained_intron MGP_129S1SvImJ_T0064511.1 MGP_129S1SvImJ_G0028015.1 mouse_genomes_project 3 162168732 162169537 - Srsf11 protein_coding retained_intron MGP_129S1SvImJ_T0064512.1 MGP_129S1SvImJ_G0028015.1 mouse_genomes_project 3 162168740 162178280 - MGP_129S1SvImJ_P0064512 Srsf11 protein_coding protein_coding MGP_129S1SvImJ_T0064513.1 MGP_129S1SvImJ_G0028015.1 mouse_genomes_project 3 162170260 162179945 - Srsf11 protein_coding retained_intron MGP_129S1SvImJ_T0064514.1 MGP_129S1SvImJ_G0028015.1 mouse_genomes_project 3 162172592 162174385 - Srsf11 protein_coding retained_intron MGP_129S1SvImJ_T0064515.1 MGP_129S1SvImJ_G0028015.1 mouse_genomes_project 3 162175661 162194798 - MGP_129S1SvImJ_P0064515 Srsf11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064516.1 MGP_129S1SvImJ_G0028015.1 mouse_genomes_project 3 162175701 162194817 - MGP_129S1SvImJ_P0064516 Srsf11 protein_coding protein_coding MGP_129S1SvImJ_T0064517.1 MGP_129S1SvImJ_G0028015.1 mouse_genomes_project 3 162178288 162189657 - MGP_129S1SvImJ_P0064517 Srsf11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064518.1 MGP_129S1SvImJ_G0028015.1 mouse_genomes_project 3 162179205 162189773 - MGP_129S1SvImJ_P0064518 Srsf11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064519.1 MGP_129S1SvImJ_G0028015.1 mouse_genomes_project 3 162179684 162194808 - Srsf11 protein_coding retained_intron MGP_129S1SvImJ_T0064520.1 MGP_129S1SvImJ_G0028015.1 mouse_genomes_project 3 162181012 162194813 - Srsf11 protein_coding retained_intron MGP_129S1SvImJ_T0064521.1 MGP_129S1SvImJ_G0028015.1 mouse_genomes_project 3 162182801 162189962 - Srsf11 protein_coding retained_intron MGP_129S1SvImJ_T0064522.1 MGP_129S1SvImJ_G0028015.1 mouse_genomes_project 3 162187655 162189956 - Srsf11 protein_coding retained_intron MGP_129S1SvImJ_T0064523.1 MGP_129S1SvImJ_G0028015.1 mouse_genomes_project 3 162189019 162194816 - Srsf11 protein_coding retained_intron MGP_129S1SvImJ_T0062557.1 MGP_129S1SvImJ_G0027611.1 mouse_genomes_project 3 97027222 97027689 - MGP_129S1SvImJ_P0062557 Hist1h2af protein_coding protein_coding MGP_129S1SvImJ_T0062559.1 MGP_129S1SvImJ_G0027613.1 mouse_genomes_project 3 97074496 97076073 - MGP_129S1SvImJ_P0062559 Hist2h4 protein_coding protein_coding MGP_129S1SvImJ_T0001219.1 MGP_129S1SvImJ_G0001144.1 mouse_genomes_project 3 50382016 50384630 - TEC TEC MGP_129S1SvImJ_T0014323.1 MGP_129S1SvImJ_G0012412.1 mouse_genomes_project 3 133606009 133606521 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007572.1 MGP_129S1SvImJ_G0006200.1 mouse_genomes_project 3 62521740 62524509 - lincRNA lincRNA MGP_129S1SvImJ_T0004326.1 MGP_129S1SvImJ_G0003798.1 mouse_genomes_project 3 97957039 98003035 - Gm43734 antisense antisense MGP_129S1SvImJ_T0013941.1 MGP_129S1SvImJ_G0012030.1 mouse_genomes_project 3 9943467 9944423 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014150.1 MGP_129S1SvImJ_G0012239.1 mouse_genomes_project 3 78531516 78532067 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001330.1 MGP_129S1SvImJ_G0001254.1 mouse_genomes_project 3 125480995 125481595 - TEC TEC MGP_129S1SvImJ_T0013932.1 MGP_129S1SvImJ_G0012021.1 mouse_genomes_project 3 7202242 7202374 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098894.1 MGP_129S1SvImJ_G0036972.1 mouse_genomes_project 3 104888305 104889565 + Gm43066 sense_intronic sense_intronic MGP_129S1SvImJ_T0010532.1 MGP_129S1SvImJ_G0008648.1 mouse_genomes_project 3 68230938 68231033 + Mir16-2 miRNA miRNA MGP_129S1SvImJ_T0014089.1 MGP_129S1SvImJ_G0012178.1 mouse_genomes_project 3 60247273 60247565 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010511.1 MGP_129S1SvImJ_G0008627.1 mouse_genomes_project 3 14984244 14984353 + Mir124a-2 miRNA miRNA MGP_129S1SvImJ_T0062141.1 MGP_129S1SvImJ_G0027512.1 mouse_genomes_project 3 93174008 93176481 - MGP_129S1SvImJ_P0062141 Lce1f protein_coding protein_coding MGP_129S1SvImJ_T0014142.1 MGP_129S1SvImJ_G0012231.1 mouse_genomes_project 3 77221706 77222977 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062748.1 MGP_129S1SvImJ_G0027668.1 mouse_genomes_project 3 101680410 101807637 - MGP_129S1SvImJ_P0062748 Man1a2 protein_coding protein_coding MGP_129S1SvImJ_T0062749.1 MGP_129S1SvImJ_G0027668.1 mouse_genomes_project 3 101705449 101772728 - Man1a2 protein_coding processed_transcript MGP_129S1SvImJ_T0062750.1 MGP_129S1SvImJ_G0027668.1 mouse_genomes_project 3 101738274 101806747 - MGP_129S1SvImJ_P0062750 Man1a2 protein_coding protein_coding MGP_129S1SvImJ_T0062751.1 MGP_129S1SvImJ_G0027668.1 mouse_genomes_project 3 101763600 101807259 - MGP_129S1SvImJ_P0062751 Man1a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062752.1 MGP_129S1SvImJ_G0027668.1 mouse_genomes_project 3 101776196 101807442 - Man1a2 protein_coding processed_transcript MGP_129S1SvImJ_T0062753.1 MGP_129S1SvImJ_G0027668.1 mouse_genomes_project 3 101806727 101807593 - Man1a2 protein_coding processed_transcript MGP_129S1SvImJ_T0062369.1 MGP_129S1SvImJ_G0027576.1 mouse_genomes_project 3 95935111 95943947 + MGP_129S1SvImJ_P0062369 Cdc42se1 protein_coding protein_coding MGP_129S1SvImJ_T0062370.1 MGP_129S1SvImJ_G0027576.1 mouse_genomes_project 3 95935189 95939919 + Cdc42se1 protein_coding retained_intron MGP_129S1SvImJ_T0062371.1 MGP_129S1SvImJ_G0027576.1 mouse_genomes_project 3 95935331 95942120 + MGP_129S1SvImJ_P0062371 Cdc42se1 protein_coding protein_coding MGP_129S1SvImJ_T0062373.1 MGP_129S1SvImJ_G0027576.1 mouse_genomes_project 3 95939824 95942078 + MGP_129S1SvImJ_P0062373 Cdc42se1 protein_coding protein_coding MGP_129S1SvImJ_T0062374.1 MGP_129S1SvImJ_G0027576.1 mouse_genomes_project 3 95939830 95942200 + MGP_129S1SvImJ_P0062374 Cdc42se1 protein_coding protein_coding MGP_129S1SvImJ_T0007681.1 MGP_129S1SvImJ_G0006286.1 mouse_genomes_project 3 119227098 119227787 + Gm42891 lincRNA lincRNA MGP_129S1SvImJ_T0063029.1 MGP_129S1SvImJ_G0027726.1 mouse_genomes_project 3 107362713 107376422 + MGP_129S1SvImJ_P0063029 Ovgp1 protein_coding protein_coding MGP_129S1SvImJ_T0063030.1 MGP_129S1SvImJ_G0027726.1 mouse_genomes_project 3 107363085 107375114 + MGP_129S1SvImJ_P0063030 Ovgp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063031.1 MGP_129S1SvImJ_G0027726.1 mouse_genomes_project 3 107366293 107369145 + Ovgp1 protein_coding retained_intron MGP_129S1SvImJ_T0063032.1 MGP_129S1SvImJ_G0027726.1 mouse_genomes_project 3 107369120 107373813 + Ovgp1 protein_coding processed_transcript MGP_129S1SvImJ_T0014085.1 MGP_129S1SvImJ_G0012174.1 mouse_genomes_project 3 59253711 59254447 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001207.1 MGP_129S1SvImJ_G0001133.1 mouse_genomes_project 3 49893383 49893494 + TEC TEC MGP_129S1SvImJ_T0060795.1 MGP_129S1SvImJ_G0027206.1 mouse_genomes_project 3 52060720 52080192 + MGP_129S1SvImJ_P0060795 Proser1 protein_coding protein_coding MGP_129S1SvImJ_T0060796.1 MGP_129S1SvImJ_G0027206.1 mouse_genomes_project 3 52060861 52061801 + Proser1 protein_coding retained_intron MGP_129S1SvImJ_T0060797.1 MGP_129S1SvImJ_G0027206.1 mouse_genomes_project 3 52060986 52071229 + Proser1 protein_coding retained_intron MGP_129S1SvImJ_T0060798.1 MGP_129S1SvImJ_G0027206.1 mouse_genomes_project 3 52076567 52078357 + Proser1 protein_coding retained_intron MGP_129S1SvImJ_T0014124.1 MGP_129S1SvImJ_G0012213.1 mouse_genomes_project 3 69418090 69418370 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014147.1 MGP_129S1SvImJ_G0012236.1 mouse_genomes_project 3 77785556 77786491 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098921.1 MGP_129S1SvImJ_G0036999.1 mouse_genomes_project 3 107170404 107172093 - Gm43331 sense_intronic sense_intronic MGP_129S1SvImJ_T0001285.1 MGP_129S1SvImJ_G0001209.1 mouse_genomes_project 3 96401361 96404623 + TEC TEC MGP_129S1SvImJ_T0099757.1 MGP_129S1SvImJ_G0037824.1 mouse_genomes_project 3 86437575 86437682 + Gm25039 snRNA snRNA MGP_129S1SvImJ_T0064145.1 MGP_129S1SvImJ_G0027954.1 mouse_genomes_project 3 148195642 148219647 - MGP_129S1SvImJ_P0064145 protein_coding protein_coding MGP_129S1SvImJ_T0102492.1 MGP_129S1SvImJ_G0040326.1 mouse_genomes_project 3 94726809 94727218 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0060857.1 MGP_129S1SvImJ_G0027218.1 mouse_genomes_project 3 53614470 53634368 - MGP_129S1SvImJ_P0060857 Sertm1 protein_coding protein_coding MGP_129S1SvImJ_T0060858.1 MGP_129S1SvImJ_G0027218.1 mouse_genomes_project 3 53614473 53635224 - MGP_129S1SvImJ_P0060858 Sertm1 protein_coding protein_coding MGP_129S1SvImJ_T0004363.1 MGP_129S1SvImJ_G0003815.1 mouse_genomes_project 3 109788204 109796281 - 1700010K24Rik antisense antisense MGP_129S1SvImJ_T0063907.1 MGP_129S1SvImJ_G0027907.1 mouse_genomes_project 3 138314713 138343501 + MGP_129S1SvImJ_P0063907 Ube2d3 protein_coding protein_coding MGP_129S1SvImJ_T0063908.1 MGP_129S1SvImJ_G0027907.1 mouse_genomes_project 3 138315866 138343550 + MGP_129S1SvImJ_P0063908 Ube2d3 protein_coding protein_coding MGP_129S1SvImJ_T0063909.1 MGP_129S1SvImJ_G0027907.1 mouse_genomes_project 3 138316079 138319264 + Ube2d3 protein_coding processed_transcript MGP_129S1SvImJ_T0063910.1 MGP_129S1SvImJ_G0027907.1 mouse_genomes_project 3 138316083 138337644 + MGP_129S1SvImJ_P0063910 Ube2d3 protein_coding protein_coding MGP_129S1SvImJ_T0063911.1 MGP_129S1SvImJ_G0027907.1 mouse_genomes_project 3 138316093 138340686 + MGP_129S1SvImJ_P0063911 Ube2d3 protein_coding protein_coding MGP_129S1SvImJ_T0063912.1 MGP_129S1SvImJ_G0027907.1 mouse_genomes_project 3 138316115 138347558 + MGP_129S1SvImJ_P0063912 Ube2d3 protein_coding protein_coding MGP_129S1SvImJ_T0063913.1 MGP_129S1SvImJ_G0027907.1 mouse_genomes_project 3 138316297 138332900 + MGP_129S1SvImJ_P0063913 Ube2d3 protein_coding protein_coding MGP_129S1SvImJ_T0063914.1 MGP_129S1SvImJ_G0027907.1 mouse_genomes_project 3 138316304 138343561 + MGP_129S1SvImJ_P0063914 Ube2d3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063915.1 MGP_129S1SvImJ_G0027907.1 mouse_genomes_project 3 138316414 138335811 + Ube2d3 protein_coding retained_intron MGP_129S1SvImJ_T0063916.1 MGP_129S1SvImJ_G0027907.1 mouse_genomes_project 3 138332277 138337688 + Ube2d3 protein_coding retained_intron MGP_129S1SvImJ_T0063917.1 MGP_129S1SvImJ_G0027907.1 mouse_genomes_project 3 138336295 138338334 + Ube2d3 protein_coding retained_intron MGP_129S1SvImJ_T0063939.1 MGP_129S1SvImJ_G0027910.1 mouse_genomes_project 3 138746407 138814271 + MGP_129S1SvImJ_P0063939 Slc39a8 protein_coding protein_coding MGP_129S1SvImJ_T0063940.1 MGP_129S1SvImJ_G0027910.1 mouse_genomes_project 3 138746782 138784687 + Slc39a8 protein_coding retained_intron MGP_129S1SvImJ_T0063941.1 MGP_129S1SvImJ_G0027910.1 mouse_genomes_project 3 138746785 138814451 + MGP_129S1SvImJ_P0063941 Slc39a8 protein_coding protein_coding MGP_129S1SvImJ_T0063942.1 MGP_129S1SvImJ_G0027910.1 mouse_genomes_project 3 138746904 138814449 + MGP_129S1SvImJ_P0063942 Slc39a8 protein_coding protein_coding MGP_129S1SvImJ_T0063943.1 MGP_129S1SvImJ_G0027910.1 mouse_genomes_project 3 138747204 138814263 + MGP_129S1SvImJ_P0063943 Slc39a8 protein_coding protein_coding MGP_129S1SvImJ_T0063944.1 MGP_129S1SvImJ_G0027910.1 mouse_genomes_project 3 138810036 138814445 + Slc39a8 protein_coding retained_intron MGP_129S1SvImJ_T0001258.1 MGP_129S1SvImJ_G0001182.1 mouse_genomes_project 3 67617993 67624911 + TEC TEC MGP_129S1SvImJ_T0013994.1 MGP_129S1SvImJ_G0012083.1 mouse_genomes_project 3 30838259 30838491 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001325.1 MGP_129S1SvImJ_G0001249.1 mouse_genomes_project 3 123971375 123974074 - TEC TEC MGP_129S1SvImJ_T0014389.1 MGP_129S1SvImJ_G0012478.1 mouse_genomes_project 3 158125719 158126171 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062759.1 MGP_129S1SvImJ_G0027671.1 mouse_genomes_project 3 102076569 102110271 - MGP_129S1SvImJ_P0062759 Ttf2 protein_coding protein_coding MGP_129S1SvImJ_T0062760.1 MGP_129S1SvImJ_G0027671.1 mouse_genomes_project 3 102079564 102084070 - Ttf2 protein_coding retained_intron MGP_129S1SvImJ_T0062761.1 MGP_129S1SvImJ_G0027671.1 mouse_genomes_project 3 102084062 102110271 - Ttf2 protein_coding retained_intron MGP_129S1SvImJ_T0062762.1 MGP_129S1SvImJ_G0027671.1 mouse_genomes_project 3 102085175 102091396 - MGP_129S1SvImJ_P0062762 Ttf2 protein_coding protein_coding MGP_129S1SvImJ_T0062763.1 MGP_129S1SvImJ_G0027671.1 mouse_genomes_project 3 102097613 102098849 - Ttf2 protein_coding retained_intron MGP_129S1SvImJ_T0014236.1 MGP_129S1SvImJ_G0012325.1 mouse_genomes_project 3 104067959 104068367 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011561.1 MGP_129S1SvImJ_G0009677.1 mouse_genomes_project 3 72623108 72623407 - Gm22538 misc_RNA misc_RNA MGP_129S1SvImJ_T0062807.1 MGP_129S1SvImJ_G0027683.1 mouse_genomes_project 3 103968299 104003401 + MGP_129S1SvImJ_P0062807 Tspan2 protein_coding protein_coding MGP_129S1SvImJ_T0062808.1 MGP_129S1SvImJ_G0027683.1 mouse_genomes_project 3 103968517 104003664 + MGP_129S1SvImJ_P0062808 Tspan2 protein_coding protein_coding MGP_129S1SvImJ_T0062809.1 MGP_129S1SvImJ_G0027683.1 mouse_genomes_project 3 103993756 104043341 + MGP_129S1SvImJ_P0062809 Tspan2 protein_coding protein_coding MGP_129S1SvImJ_T0017991.1 MGP_129S1SvImJ_G0015505.1 mouse_genomes_project 3 50701198 50702583 + Gm38132 processed_transcript lincRNA MGP_129S1SvImJ_T0017992.1 MGP_129S1SvImJ_G0015505.1 mouse_genomes_project 3 50701227 50702240 + Gm38132 processed_transcript retained_intron MGP_129S1SvImJ_T0101080.1 MGP_129S1SvImJ_G0039147.1 mouse_genomes_project 3 157878857 157878938 - Gm24494 snoRNA snoRNA MGP_129S1SvImJ_T0001256.1 MGP_129S1SvImJ_G0001180.1 mouse_genomes_project 3 65225425 65226534 + TEC TEC MGP_129S1SvImJ_T0061199.1 MGP_129S1SvImJ_G0027300.1 mouse_genomes_project 3 72272013 72358813 - MGP_129S1SvImJ_P0061199 Sis protein_coding protein_coding MGP_129S1SvImJ_T0061200.1 MGP_129S1SvImJ_G0027300.1 mouse_genomes_project 3 72272016 72357901 - MGP_129S1SvImJ_P0061200 Sis protein_coding protein_coding MGP_129S1SvImJ_T0061201.1 MGP_129S1SvImJ_G0027300.1 mouse_genomes_project 3 72341528 72342662 - Sis protein_coding retained_intron MGP_129S1SvImJ_T0061202.1 MGP_129S1SvImJ_G0027300.1 mouse_genomes_project 3 72356042 72358810 - Sis protein_coding retained_intron MGP_129S1SvImJ_T0060763.1 MGP_129S1SvImJ_G0027199.1 mouse_genomes_project 3 49995073 50042786 - MGP_129S1SvImJ_P0060763 Setd7 protein_coding protein_coding MGP_129S1SvImJ_T0060764.1 MGP_129S1SvImJ_G0027199.1 mouse_genomes_project 3 50009849 50016456 - Setd7 protein_coding retained_intron MGP_129S1SvImJ_T0060765.1 MGP_129S1SvImJ_G0027199.1 mouse_genomes_project 3 50015309 50016937 - Setd7 protein_coding retained_intron MGP_129S1SvImJ_T0060766.1 MGP_129S1SvImJ_G0027199.1 mouse_genomes_project 3 50029083 50031721 - Setd7 protein_coding retained_intron MGP_129S1SvImJ_T0102459.1 MGP_129S1SvImJ_G0040293.1 mouse_genomes_project 3 58380533 58403766 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0014359.1 MGP_129S1SvImJ_G0012448.1 mouse_genomes_project 3 143238977 143240358 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062135.1 MGP_129S1SvImJ_G0027506.1 mouse_genomes_project 3 93101758 93104255 - MGP_129S1SvImJ_P0062135 Lce1a1 protein_coding protein_coding MGP_129S1SvImJ_T0101701.1 MGP_129S1SvImJ_G0039710.1 mouse_genomes_project 3 131427666 131428352 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0061412.1 MGP_129S1SvImJ_G0027352.1 mouse_genomes_project 3 86023105 86031787 - MGP_129S1SvImJ_P0061412 Prss48 protein_coding protein_coding MGP_129S1SvImJ_T0004319.1 MGP_129S1SvImJ_G0003792.1 mouse_genomes_project 3 97015059 97026967 - Gm15444 antisense antisense MGP_129S1SvImJ_T0011562.1 MGP_129S1SvImJ_G0009678.1 mouse_genomes_project 3 78471525 78471868 + Gm24749 misc_RNA misc_RNA MGP_129S1SvImJ_T0060282.1 MGP_129S1SvImJ_G0027117.1 mouse_genomes_project 3 26176124 26193695 + MGP_129S1SvImJ_P0060282 Eif5a2 protein_coding protein_coding MGP_129S1SvImJ_T0014057.1 MGP_129S1SvImJ_G0012146.1 mouse_genomes_project 3 50958876 50959117 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001380.1 MGP_129S1SvImJ_G0001303.1 mouse_genomes_project 3 138304721 138312453 - TEC TEC MGP_129S1SvImJ_T0010524.1 MGP_129S1SvImJ_G0008640.1 mouse_genomes_project 3 34272074 34272138 - Mir7009 miRNA miRNA MGP_129S1SvImJ_T0014232.1 MGP_129S1SvImJ_G0012321.1 mouse_genomes_project 3 103298781 103299466 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001322.1 MGP_129S1SvImJ_G0001246.1 mouse_genomes_project 3 123617904 123619190 + TEC TEC MGP_129S1SvImJ_T0011550.1 MGP_129S1SvImJ_G0009666.1 mouse_genomes_project 3 10929651 10929946 + Gm25981 misc_RNA misc_RNA MGP_129S1SvImJ_T0099785.1 MGP_129S1SvImJ_G0037852.1 mouse_genomes_project 3 124740365 124740521 + Gm25153 snRNA snRNA MGP_129S1SvImJ_T0014388.1 MGP_129S1SvImJ_G0012477.1 mouse_genomes_project 3 157699755 157700048 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001200.1 MGP_129S1SvImJ_G0001126.1 mouse_genomes_project 3 49152367 49156091 - TEC TEC MGP_129S1SvImJ_T0063986.1 MGP_129S1SvImJ_G0027920.1 mouse_genomes_project 3 140956671 140958904 + MGP_129S1SvImJ_P0063986 protein_coding protein_coding MGP_129S1SvImJ_T0007680.1 MGP_129S1SvImJ_G0006285.1 mouse_genomes_project 3 119026498 119047593 - 1700061I17Rik lincRNA lincRNA MGP_129S1SvImJ_T0061404.1 MGP_129S1SvImJ_G0027349.1 mouse_genomes_project 3 85662948 85676868 - Fam160a1 protein_coding retained_intron MGP_129S1SvImJ_T0061405.1 MGP_129S1SvImJ_G0027349.1 mouse_genomes_project 3 85662950 85832841 - MGP_129S1SvImJ_P0061405 Fam160a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061406.1 MGP_129S1SvImJ_G0027349.1 mouse_genomes_project 3 85662950 85751195 - MGP_129S1SvImJ_P0061406 Fam160a1 protein_coding protein_coding MGP_129S1SvImJ_T0061407.1 MGP_129S1SvImJ_G0027349.1 mouse_genomes_project 3 85662952 85746419 - MGP_129S1SvImJ_P0061407 Fam160a1 protein_coding protein_coding MGP_129S1SvImJ_T0004217.1 MGP_129S1SvImJ_G0003720.1 mouse_genomes_project 3 16424342 16439456 + Gm16093 antisense antisense MGP_129S1SvImJ_T0101054.1 MGP_129S1SvImJ_G0039121.1 mouse_genomes_project 3 105495712 105495828 + Gm23077 snoRNA snoRNA MGP_129S1SvImJ_T0014068.1 MGP_129S1SvImJ_G0012157.1 mouse_genomes_project 3 56150814 56151861 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007724.1 MGP_129S1SvImJ_G0006319.1 mouse_genomes_project 3 137232427 137254194 - 4930539C22Rik lincRNA lincRNA MGP_129S1SvImJ_T0062183.1 MGP_129S1SvImJ_G0027544.1 mouse_genomes_project 3 94875041 94900635 + MGP_129S1SvImJ_P0062183 Them4 protein_coding protein_coding MGP_129S1SvImJ_T0062184.1 MGP_129S1SvImJ_G0027544.1 mouse_genomes_project 3 94875082 94883124 + Them4 protein_coding retained_intron MGP_129S1SvImJ_T0062185.1 MGP_129S1SvImJ_G0027544.1 mouse_genomes_project 3 94875088 94890993 + Them4 protein_coding retained_intron MGP_129S1SvImJ_T0060991.1 MGP_129S1SvImJ_G0027250.1 mouse_genomes_project 3 58781297 58794414 + MGP_129S1SvImJ_P0060991 C130079G13Rik protein_coding protein_coding MGP_129S1SvImJ_T0061420.1 MGP_129S1SvImJ_G0027354.1 mouse_genomes_project 3 86261728 86853414 + MGP_129S1SvImJ_P0061420 Lrba protein_coding protein_coding MGP_129S1SvImJ_T0061421.1 MGP_129S1SvImJ_G0027354.1 mouse_genomes_project 3 86261728 86816440 + MGP_129S1SvImJ_P0061421 Lrba protein_coding protein_coding MGP_129S1SvImJ_T0061422.1 MGP_129S1SvImJ_G0027354.1 mouse_genomes_project 3 86261728 86847653 + MGP_129S1SvImJ_P0061422 Lrba protein_coding protein_coding MGP_129S1SvImJ_T0061423.1 MGP_129S1SvImJ_G0027354.1 mouse_genomes_project 3 86403164 86405373 + Lrba protein_coding retained_intron MGP_129S1SvImJ_T0061424.1 MGP_129S1SvImJ_G0027354.1 mouse_genomes_project 3 86596745 86668410 + Lrba protein_coding retained_intron MGP_129S1SvImJ_T0061427.1 MGP_129S1SvImJ_G0027354.1 mouse_genomes_project 3 86603035 86684911 + Lrba protein_coding retained_intron MGP_129S1SvImJ_T0061428.1 MGP_129S1SvImJ_G0027354.1 mouse_genomes_project 3 86604496 86853417 + MGP_129S1SvImJ_P0061428 Lrba protein_coding protein_coding MGP_129S1SvImJ_T0099760.1 MGP_129S1SvImJ_G0037827.1 mouse_genomes_project 3 89145300 89145407 - Gm26465 snRNA snRNA MGP_129S1SvImJ_T0062125.1 MGP_129S1SvImJ_G0027498.1 mouse_genomes_project 3 92903186 92905405 - MGP_129S1SvImJ_P0062125 protein_coding protein_coding MGP_129S1SvImJ_T0064245.1 MGP_129S1SvImJ_G0027978.1 mouse_genomes_project 3 150174229 150216907 - MGP_129S1SvImJ_P0064245 Samd13 protein_coding protein_coding MGP_129S1SvImJ_T0064246.1 MGP_129S1SvImJ_G0027978.1 mouse_genomes_project 3 150175147 150213717 - MGP_129S1SvImJ_P0064246 Samd13 protein_coding protein_coding MGP_129S1SvImJ_T0064247.1 MGP_129S1SvImJ_G0027978.1 mouse_genomes_project 3 150175158 150213829 - MGP_129S1SvImJ_P0064247 Samd13 protein_coding protein_coding MGP_129S1SvImJ_T0064248.1 MGP_129S1SvImJ_G0027978.1 mouse_genomes_project 3 150175243 150216790 - MGP_129S1SvImJ_P0064248 Samd13 protein_coding protein_coding MGP_129S1SvImJ_T0064251.1 MGP_129S1SvImJ_G0027978.1 mouse_genomes_project 3 150211758 150216786 - Samd13 protein_coding retained_intron MGP_129S1SvImJ_T0060007.1 MGP_129S1SvImJ_G0027047.1 mouse_genomes_project 3 2527337 2527826 + MGP_129S1SvImJ_P0060007 Gm8797 protein_coding protein_coding MGP_129S1SvImJ_T0063409.1 MGP_129S1SvImJ_G0027816.1 mouse_genomes_project 3 118551590 118595844 - MGP_129S1SvImJ_P0063409 Gm43191 protein_coding protein_coding MGP_129S1SvImJ_T0064362.1 MGP_129S1SvImJ_G0027991.1 mouse_genomes_project 3 156202540 156256971 + MGP_129S1SvImJ_P0064362 Usp33 protein_coding protein_coding MGP_129S1SvImJ_T0064363.1 MGP_129S1SvImJ_G0027991.1 mouse_genomes_project 3 156202540 156256692 + MGP_129S1SvImJ_P0064363 Usp33 protein_coding protein_coding MGP_129S1SvImJ_T0064364.1 MGP_129S1SvImJ_G0027991.1 mouse_genomes_project 3 156202551 156256976 + MGP_129S1SvImJ_P0064364 Usp33 protein_coding protein_coding MGP_129S1SvImJ_T0064365.1 MGP_129S1SvImJ_G0027991.1 mouse_genomes_project 3 156202574 156235277 + MGP_129S1SvImJ_P0064365 Usp33 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064366.1 MGP_129S1SvImJ_G0027991.1 mouse_genomes_project 3 156202577 156221642 + Usp33 protein_coding retained_intron MGP_129S1SvImJ_T0064367.1 MGP_129S1SvImJ_G0027991.1 mouse_genomes_project 3 156225209 156231832 + Usp33 protein_coding processed_transcript MGP_129S1SvImJ_T0064368.1 MGP_129S1SvImJ_G0027991.1 mouse_genomes_project 3 156227246 156230497 + Usp33 protein_coding retained_intron MGP_129S1SvImJ_T0064369.1 MGP_129S1SvImJ_G0027991.1 mouse_genomes_project 3 156229622 156236993 + Usp33 protein_coding retained_intron MGP_129S1SvImJ_T0064370.1 MGP_129S1SvImJ_G0027991.1 mouse_genomes_project 3 156231770 156238363 + MGP_129S1SvImJ_P0064370 Usp33 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064371.1 MGP_129S1SvImJ_G0027991.1 mouse_genomes_project 3 156245423 156255866 + Usp33 protein_coding processed_transcript MGP_129S1SvImJ_T0064372.1 MGP_129S1SvImJ_G0027991.1 mouse_genomes_project 3 156245911 156247632 + Usp33 protein_coding retained_intron MGP_129S1SvImJ_T0098915.1 MGP_129S1SvImJ_G0036993.1 mouse_genomes_project 3 106159707 106161458 - Gm42659 sense_intronic sense_intronic MGP_129S1SvImJ_T0013976.1 MGP_129S1SvImJ_G0012065.1 mouse_genomes_project 3 19280054 19280487 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013978.1 MGP_129S1SvImJ_G0012067.1 mouse_genomes_project 3 19777533 19778303 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004248.1 MGP_129S1SvImJ_G0003741.1 mouse_genomes_project 3 39573469 39574889 - Gm31266 antisense antisense MGP_129S1SvImJ_T0014030.1 MGP_129S1SvImJ_G0012119.1 mouse_genomes_project 3 41840891 41841420 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001173.1 MGP_129S1SvImJ_G0001099.1 mouse_genomes_project 3 35190921 35193385 + TEC TEC MGP_129S1SvImJ_T0063576.1 MGP_129S1SvImJ_G0027848.1 mouse_genomes_project 3 125579320 125678111 + MGP_129S1SvImJ_P0063576 Sec24d protein_coding protein_coding MGP_129S1SvImJ_T0063577.1 MGP_129S1SvImJ_G0027848.1 mouse_genomes_project 3 125579344 125591256 + Sec24d protein_coding retained_intron MGP_129S1SvImJ_T0063578.1 MGP_129S1SvImJ_G0027848.1 mouse_genomes_project 3 125579355 125586271 + MGP_129S1SvImJ_P0063578 Sec24d protein_coding protein_coding MGP_129S1SvImJ_T0063579.1 MGP_129S1SvImJ_G0027848.1 mouse_genomes_project 3 125602303 125678106 + Sec24d protein_coding retained_intron MGP_129S1SvImJ_T0063580.1 MGP_129S1SvImJ_G0027848.1 mouse_genomes_project 3 125647332 125649267 + Sec24d protein_coding retained_intron MGP_129S1SvImJ_T0063581.1 MGP_129S1SvImJ_G0027848.1 mouse_genomes_project 3 125649789 125662416 + Sec24d protein_coding processed_transcript MGP_129S1SvImJ_T0063582.1 MGP_129S1SvImJ_G0027848.1 mouse_genomes_project 3 125667288 125668346 + Sec24d protein_coding retained_intron MGP_129S1SvImJ_T0063583.1 MGP_129S1SvImJ_G0027848.1 mouse_genomes_project 3 125677183 125678106 + Sec24d protein_coding retained_intron MGP_129S1SvImJ_T0014024.1 MGP_129S1SvImJ_G0012113.1 mouse_genomes_project 3 38855896 38856167 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007663.1 MGP_129S1SvImJ_G0006270.1 mouse_genomes_project 3 108291941 108341344 - Gm35507 lincRNA lincRNA MGP_129S1SvImJ_T0064537.1 MGP_129S1SvImJ_G0028018.1 mouse_genomes_project 3 163653678 163692650 + MGP_129S1SvImJ_P0064537 Depdc1a protein_coding protein_coding MGP_129S1SvImJ_T0064538.1 MGP_129S1SvImJ_G0028018.1 mouse_genomes_project 3 163653696 163692271 + MGP_129S1SvImJ_P0064538 Depdc1a protein_coding protein_coding MGP_129S1SvImJ_T0064539.1 MGP_129S1SvImJ_G0028018.1 mouse_genomes_project 3 163653703 163692154 + MGP_129S1SvImJ_P0064539 Depdc1a protein_coding protein_coding MGP_129S1SvImJ_T0004238.1 MGP_129S1SvImJ_G0003734.1 mouse_genomes_project 3 33757587 33764321 + Mccc1os antisense antisense MGP_129S1SvImJ_T0004239.1 MGP_129S1SvImJ_G0003734.1 mouse_genomes_project 3 33757667 33767358 + Mccc1os antisense antisense MGP_129S1SvImJ_T0004240.1 MGP_129S1SvImJ_G0003734.1 mouse_genomes_project 3 33758186 33782973 + Mccc1os antisense antisense MGP_129S1SvImJ_T0061891.1 MGP_129S1SvImJ_G0027440.1 mouse_genomes_project 3 89646152 89648682 + Pygo2 protein_coding processed_transcript MGP_129S1SvImJ_T0061892.1 MGP_129S1SvImJ_G0027440.1 mouse_genomes_project 3 89646199 89651067 + MGP_129S1SvImJ_P0061892 Pygo2 protein_coding protein_coding MGP_129S1SvImJ_T0061893.1 MGP_129S1SvImJ_G0027440.1 mouse_genomes_project 3 89646362 89647108 + Pygo2 protein_coding processed_transcript MGP_129S1SvImJ_T0061894.1 MGP_129S1SvImJ_G0027440.1 mouse_genomes_project 3 89646678 89648621 + Pygo2 protein_coding processed_transcript MGP_129S1SvImJ_T0061895.1 MGP_129S1SvImJ_G0027440.1 mouse_genomes_project 3 89646775 89651067 + MGP_129S1SvImJ_P0061895 Pygo2 protein_coding protein_coding MGP_129S1SvImJ_T0061896.1 MGP_129S1SvImJ_G0027440.1 mouse_genomes_project 3 89646970 89648931 + Pygo2 protein_coding processed_transcript MGP_129S1SvImJ_T0062153.1 MGP_129S1SvImJ_G0027523.1 mouse_genomes_project 3 93408258 93409377 + MGP_129S1SvImJ_P0062153 Lce3b protein_coding protein_coding MGP_129S1SvImJ_T0014391.1 MGP_129S1SvImJ_G0012480.1 mouse_genomes_project 3 160135139 160137480 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010517.1 MGP_129S1SvImJ_G0008633.1 mouse_genomes_project 3 26850274 26850372 + Mir551b miRNA miRNA MGP_129S1SvImJ_T0010555.1 MGP_129S1SvImJ_G0008671.1 mouse_genomes_project 3 104954326 104954412 - Gm25325 miRNA miRNA MGP_129S1SvImJ_T0061590.1 MGP_129S1SvImJ_G0027391.1 mouse_genomes_project 3 88488878 88517403 + MGP_129S1SvImJ_P0061590 Smg5 protein_coding protein_coding MGP_129S1SvImJ_T0061591.1 MGP_129S1SvImJ_G0027391.1 mouse_genomes_project 3 88488929 88507801 + Smg5 protein_coding retained_intron MGP_129S1SvImJ_T0061592.1 MGP_129S1SvImJ_G0027391.1 mouse_genomes_project 3 88488983 88497513 + Smg5 protein_coding retained_intron MGP_129S1SvImJ_T0061593.1 MGP_129S1SvImJ_G0027391.1 mouse_genomes_project 3 88494916 88502671 + Smg5 protein_coding processed_transcript MGP_129S1SvImJ_T0061594.1 MGP_129S1SvImJ_G0027391.1 mouse_genomes_project 3 88496637 88505803 + MGP_129S1SvImJ_P0061594 Smg5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061595.1 MGP_129S1SvImJ_G0027391.1 mouse_genomes_project 3 88507562 88509709 + Smg5 protein_coding retained_intron MGP_129S1SvImJ_T0061596.1 MGP_129S1SvImJ_G0027391.1 mouse_genomes_project 3 88513258 88514702 + Smg5 protein_coding retained_intron MGP_129S1SvImJ_T0061597.1 MGP_129S1SvImJ_G0027391.1 mouse_genomes_project 3 88513411 88516335 + Smg5 protein_coding processed_transcript MGP_129S1SvImJ_T0061598.1 MGP_129S1SvImJ_G0027391.1 mouse_genomes_project 3 88515600 88516156 + Smg5 protein_coding retained_intron MGP_129S1SvImJ_T0007768.1 MGP_129S1SvImJ_G0006358.1 mouse_genomes_project 3 150977132 150981509 + Gm37041 lincRNA lincRNA MGP_129S1SvImJ_T0064470.1 MGP_129S1SvImJ_G0028008.1 mouse_genomes_project 3 159125564 159134753 + Lrriq3 protein_coding retained_intron MGP_129S1SvImJ_T0064471.1 MGP_129S1SvImJ_G0028008.1 mouse_genomes_project 3 159125564 159233328 + MGP_129S1SvImJ_P0064471 Lrriq3 protein_coding protein_coding MGP_129S1SvImJ_T0064472.1 MGP_129S1SvImJ_G0028008.1 mouse_genomes_project 3 159125668 159221278 + MGP_129S1SvImJ_P0064472 Lrriq3 protein_coding protein_coding MGP_129S1SvImJ_T0064473.1 MGP_129S1SvImJ_G0028008.1 mouse_genomes_project 3 159125718 159176665 + MGP_129S1SvImJ_P0064473 Lrriq3 protein_coding protein_coding MGP_129S1SvImJ_T0001343.1 MGP_129S1SvImJ_G0001267.1 mouse_genomes_project 3 129167355 129170964 + TEC TEC MGP_129S1SvImJ_T0062167.1 MGP_129S1SvImJ_G0027532.1 mouse_genomes_project 3 93763340 93767863 + Flg protein_coding TEC MGP_129S1SvImJ_T0062168.1 MGP_129S1SvImJ_G0027532.1 mouse_genomes_project 3 93763358 93770469 + MGP_129S1SvImJ_P0062168 Flg protein_coding protein_coding MGP_129S1SvImJ_T0062169.1 MGP_129S1SvImJ_G0027532.1 mouse_genomes_project 3 93767385 93770469 + MGP_129S1SvImJ_P0062169 Flg protein_coding protein_coding MGP_129S1SvImJ_T0014149.1 MGP_129S1SvImJ_G0012238.1 mouse_genomes_project 3 78492470 78493136 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001132.1 MGP_129S1SvImJ_G0001058.1 mouse_genomes_project 3 7282386 7282716 + TEC TEC MGP_129S1SvImJ_T0099767.1 MGP_129S1SvImJ_G0037834.1 mouse_genomes_project 3 93427980 93428082 - Gm24481 snRNA snRNA MGP_129S1SvImJ_T0004375.1 MGP_129S1SvImJ_G0003825.1 mouse_genomes_project 3 124642836 124659638 - Gm42835 antisense antisense MGP_129S1SvImJ_T0014245.1 MGP_129S1SvImJ_G0012334.1 mouse_genomes_project 3 106252932 106253187 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007679.1 MGP_129S1SvImJ_G0006284.1 mouse_genomes_project 3 118573196 118573620 + 4930512P04Rik lincRNA lincRNA MGP_129S1SvImJ_T0014313.1 MGP_129S1SvImJ_G0012402.1 mouse_genomes_project 3 128861120 128861328 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007733.1 MGP_129S1SvImJ_G0006328.1 mouse_genomes_project 3 141039278 141055052 + Gm19708 lincRNA lincRNA MGP_129S1SvImJ_T0014374.1 MGP_129S1SvImJ_G0012463.1 mouse_genomes_project 3 148216710 148217347 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062754.1 MGP_129S1SvImJ_G0027669.1 mouse_genomes_project 3 101954226 102030786 + MGP_129S1SvImJ_P0062754 Vtcn1 protein_coding protein_coding MGP_129S1SvImJ_T0062881.1 MGP_129S1SvImJ_G0027694.1 mouse_genomes_project 3 104864084 104917249 + MGP_129S1SvImJ_P0062881 Syt6 protein_coding protein_coding MGP_129S1SvImJ_T0062882.1 MGP_129S1SvImJ_G0027694.1 mouse_genomes_project 3 104864134 104921511 + MGP_129S1SvImJ_P0062882 Syt6 protein_coding protein_coding MGP_129S1SvImJ_T0062883.1 MGP_129S1SvImJ_G0027694.1 mouse_genomes_project 3 104864135 104921511 + MGP_129S1SvImJ_P0062883 Syt6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062884.1 MGP_129S1SvImJ_G0027694.1 mouse_genomes_project 3 104864153 104919100 + MGP_129S1SvImJ_P0062884 Syt6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062885.1 MGP_129S1SvImJ_G0027694.1 mouse_genomes_project 3 104864231 104917230 + MGP_129S1SvImJ_P0062885 Syt6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062886.1 MGP_129S1SvImJ_G0027694.1 mouse_genomes_project 3 104864942 104876382 + MGP_129S1SvImJ_P0062886 Syt6 protein_coding protein_coding MGP_129S1SvImJ_T0062887.1 MGP_129S1SvImJ_G0027694.1 mouse_genomes_project 3 104864987 104921510 + MGP_129S1SvImJ_P0062887 Syt6 protein_coding protein_coding MGP_129S1SvImJ_T0062888.1 MGP_129S1SvImJ_G0027694.1 mouse_genomes_project 3 104865003 104913877 + MGP_129S1SvImJ_P0062888 Syt6 protein_coding protein_coding MGP_129S1SvImJ_T0007742.1 MGP_129S1SvImJ_G0006336.1 mouse_genomes_project 3 146333144 146386245 + Gm43614 lincRNA lincRNA MGP_129S1SvImJ_T0014369.1 MGP_129S1SvImJ_G0012458.1 mouse_genomes_project 3 147134258 147135083 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014028.1 MGP_129S1SvImJ_G0012117.1 mouse_genomes_project 3 41328654 41329591 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101680.1 MGP_129S1SvImJ_G0039700.1 mouse_genomes_project 3 11687734 11688014 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0001187.1 MGP_129S1SvImJ_G0001113.1 mouse_genomes_project 3 40178692 40182468 + TEC TEC MGP_129S1SvImJ_T0061713.1 MGP_129S1SvImJ_G0027411.1 mouse_genomes_project 3 89097015 89098923 - Dap3 protein_coding retained_intron MGP_129S1SvImJ_T0061714.1 MGP_129S1SvImJ_G0027411.1 mouse_genomes_project 3 89097015 89123632 - MGP_129S1SvImJ_P0061714 Dap3 protein_coding protein_coding MGP_129S1SvImJ_T0061715.1 MGP_129S1SvImJ_G0027411.1 mouse_genomes_project 3 89097142 89104366 - MGP_129S1SvImJ_P0061715 Dap3 protein_coding protein_coding MGP_129S1SvImJ_T0061716.1 MGP_129S1SvImJ_G0027411.1 mouse_genomes_project 3 89097178 89104399 - MGP_129S1SvImJ_P0061716 Dap3 protein_coding protein_coding MGP_129S1SvImJ_T0061717.1 MGP_129S1SvImJ_G0027411.1 mouse_genomes_project 3 89097208 89123551 - MGP_129S1SvImJ_P0061717 Dap3 protein_coding protein_coding MGP_129S1SvImJ_T0061718.1 MGP_129S1SvImJ_G0027411.1 mouse_genomes_project 3 89101854 89123979 - MGP_129S1SvImJ_P0061718 Dap3 protein_coding protein_coding MGP_129S1SvImJ_T0061719.1 MGP_129S1SvImJ_G0027411.1 mouse_genomes_project 3 89101888 89124526 - MGP_129S1SvImJ_P0061719 Dap3 protein_coding protein_coding MGP_129S1SvImJ_T0061720.1 MGP_129S1SvImJ_G0027411.1 mouse_genomes_project 3 89102823 89123952 - MGP_129S1SvImJ_P0061720 Dap3 protein_coding protein_coding MGP_129S1SvImJ_T0061721.1 MGP_129S1SvImJ_G0027411.1 mouse_genomes_project 3 89102871 89123587 - MGP_129S1SvImJ_P0061721 Dap3 protein_coding protein_coding MGP_129S1SvImJ_T0061722.1 MGP_129S1SvImJ_G0027411.1 mouse_genomes_project 3 89107283 89112202 - MGP_129S1SvImJ_P0061722 Dap3 protein_coding protein_coding MGP_129S1SvImJ_T0061723.1 MGP_129S1SvImJ_G0027411.1 mouse_genomes_project 3 89122733 89124455 - Dap3 protein_coding processed_transcript MGP_129S1SvImJ_T0061725.1 MGP_129S1SvImJ_G0027411.1 mouse_genomes_project 3 89124061 89124527 - Dap3 protein_coding processed_transcript MGP_129S1SvImJ_T0014193.1 MGP_129S1SvImJ_G0012282.1 mouse_genomes_project 3 93910554 93911337 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001166.1 MGP_129S1SvImJ_G0001092.1 mouse_genomes_project 3 32343754 32344385 - TEC TEC MGP_129S1SvImJ_T0061284.1 MGP_129S1SvImJ_G0027319.1 mouse_genomes_project 3 80437103 80560161 - MGP_129S1SvImJ_P0061284 Gria2 protein_coding protein_coding MGP_129S1SvImJ_T0061285.1 MGP_129S1SvImJ_G0027319.1 mouse_genomes_project 3 80447679 80560161 - MGP_129S1SvImJ_P0061285 Gria2 protein_coding protein_coding MGP_129S1SvImJ_T0061286.1 MGP_129S1SvImJ_G0027319.1 mouse_genomes_project 3 80447924 80559905 - MGP_129S1SvImJ_P0061286 Gria2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061287.1 MGP_129S1SvImJ_G0027319.1 mouse_genomes_project 3 80451199 80560117 - Gria2 protein_coding retained_intron MGP_129S1SvImJ_T0061288.1 MGP_129S1SvImJ_G0027319.1 mouse_genomes_project 3 80464314 80559976 - Gria2 protein_coding retained_intron MGP_129S1SvImJ_T0061289.1 MGP_129S1SvImJ_G0027319.1 mouse_genomes_project 3 80465785 80560050 - Gria2 protein_coding retained_intron MGP_129S1SvImJ_T0061290.1 MGP_129S1SvImJ_G0027319.1 mouse_genomes_project 3 80467025 80560106 - Gria2 protein_coding retained_intron MGP_129S1SvImJ_T0061291.1 MGP_129S1SvImJ_G0027319.1 mouse_genomes_project 3 80557364 80560019 - Gria2 protein_coding retained_intron MGP_129S1SvImJ_T0001350.1 MGP_129S1SvImJ_G0001274.1 mouse_genomes_project 3 129590645 129593225 - TEC TEC MGP_129S1SvImJ_T0007480.1 MGP_129S1SvImJ_G0006131.1 mouse_genomes_project 3 15648892 15661084 - 4930433B08Rik lincRNA lincRNA MGP_129S1SvImJ_T0063842.1 MGP_129S1SvImJ_G0027895.1 mouse_genomes_project 3 135771153 135876404 - MGP_129S1SvImJ_P0063842 Gstcd protein_coding protein_coding MGP_129S1SvImJ_T0063843.1 MGP_129S1SvImJ_G0027895.1 mouse_genomes_project 3 135772167 135876612 - MGP_129S1SvImJ_P0063843 Gstcd protein_coding protein_coding MGP_129S1SvImJ_T0063844.1 MGP_129S1SvImJ_G0027895.1 mouse_genomes_project 3 135782508 135792032 - Gstcd protein_coding retained_intron MGP_129S1SvImJ_T0063845.1 MGP_129S1SvImJ_G0027895.1 mouse_genomes_project 3 135785184 135876326 - Gstcd protein_coding processed_transcript MGP_129S1SvImJ_T0063846.1 MGP_129S1SvImJ_G0027895.1 mouse_genomes_project 3 135865817 135876357 - Gstcd protein_coding retained_intron MGP_129S1SvImJ_T0063847.1 MGP_129S1SvImJ_G0027895.1 mouse_genomes_project 3 135866012 135867717 - Gstcd protein_coding retained_intron MGP_129S1SvImJ_T0001278.1 MGP_129S1SvImJ_G0001202.1 mouse_genomes_project 3 89410893 89413633 + TEC TEC MGP_129S1SvImJ_T0014122.1 MGP_129S1SvImJ_G0012211.1 mouse_genomes_project 3 69239457 69240337 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014200.1 MGP_129S1SvImJ_G0012289.1 mouse_genomes_project 3 96079416 96079610 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007644.1 MGP_129S1SvImJ_G0006255.1 mouse_genomes_project 3 101554419 101555724 + Gm43121 lincRNA lincRNA MGP_129S1SvImJ_T0014097.1 MGP_129S1SvImJ_G0012186.1 mouse_genomes_project 3 62948683 62950688 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102479.1 MGP_129S1SvImJ_G0040313.1 mouse_genomes_project 3 94208225 94208418 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0010528.1 MGP_129S1SvImJ_G0008644.1 mouse_genomes_project 3 49760101 49760167 + Gm24282 miRNA miRNA MGP_129S1SvImJ_T0001266.1 MGP_129S1SvImJ_G0001190.1 mouse_genomes_project 3 76121012 76124696 + TEC TEC MGP_129S1SvImJ_T0014063.1 MGP_129S1SvImJ_G0012152.1 mouse_genomes_project 3 52668142 52668550 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001135.1 MGP_129S1SvImJ_G0001061.1 mouse_genomes_project 3 10343112 10346806 + TEC TEC MGP_129S1SvImJ_T0001288.1 MGP_129S1SvImJ_G0001212.1 mouse_genomes_project 3 97324811 97327676 - TEC TEC MGP_129S1SvImJ_T0061022.1 MGP_129S1SvImJ_G0027256.1 mouse_genomes_project 3 60319735 60326517 + MGP_129S1SvImJ_P0061022 Rap2b protein_coding protein_coding MGP_129S1SvImJ_T0007734.1 MGP_129S1SvImJ_G0006329.1 mouse_genomes_project 3 141782332 141797703 - 4930425O10Rik lincRNA lincRNA MGP_129S1SvImJ_T0061920.1 MGP_129S1SvImJ_G0027447.1 mouse_genomes_project 3 90068340 90096755 + MGP_129S1SvImJ_P0061920 She protein_coding protein_coding MGP_129S1SvImJ_T0061921.1 MGP_129S1SvImJ_G0027447.1 mouse_genomes_project 3 90074740 90076227 + She protein_coding retained_intron MGP_129S1SvImJ_T0014349.1 MGP_129S1SvImJ_G0012438.1 mouse_genomes_project 3 140657606 140658330 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001379.1 MGP_129S1SvImJ_G0001302.1 mouse_genomes_project 3 138301775 138304473 - TEC TEC MGP_129S1SvImJ_T0007544.1 MGP_129S1SvImJ_G0006179.1 mouse_genomes_project 3 47430548 47453200 + Gm31415 lincRNA lincRNA MGP_129S1SvImJ_T0013944.1 MGP_129S1SvImJ_G0012033.1 mouse_genomes_project 3 10826997 10827555 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001160.1 MGP_129S1SvImJ_G0001086.1 mouse_genomes_project 3 30718969 30721407 - TEC TEC MGP_129S1SvImJ_T0007542.1 MGP_129S1SvImJ_G0006177.1 mouse_genomes_project 3 46949285 46952632 - 1700018B24Rik lincRNA lincRNA MGP_129S1SvImJ_T0007647.1 MGP_129S1SvImJ_G0006258.1 mouse_genomes_project 3 102886378 102894936 + Gm43135 lincRNA lincRNA MGP_129S1SvImJ_T0060673.1 MGP_129S1SvImJ_G0027186.1 mouse_genomes_project 3 39565342 39631619 + MGP_129S1SvImJ_P0060673 Jade1 protein_coding protein_coding MGP_129S1SvImJ_T0060674.1 MGP_129S1SvImJ_G0027186.1 mouse_genomes_project 3 39565352 39607528 + MGP_129S1SvImJ_P0060674 Jade1 protein_coding protein_coding MGP_129S1SvImJ_T0060675.1 MGP_129S1SvImJ_G0027186.1 mouse_genomes_project 3 39565371 39610337 + MGP_129S1SvImJ_P0060675 Jade1 protein_coding protein_coding MGP_129S1SvImJ_T0060676.1 MGP_129S1SvImJ_G0027186.1 mouse_genomes_project 3 39574559 39631613 + MGP_129S1SvImJ_P0060676 Jade1 protein_coding protein_coding MGP_129S1SvImJ_T0060677.1 MGP_129S1SvImJ_G0027186.1 mouse_genomes_project 3 39574601 39605481 + Jade1 protein_coding processed_transcript MGP_129S1SvImJ_T0060678.1 MGP_129S1SvImJ_G0027186.1 mouse_genomes_project 3 39574797 39628813 + MGP_129S1SvImJ_P0060678 Jade1 protein_coding protein_coding MGP_129S1SvImJ_T0060679.1 MGP_129S1SvImJ_G0027186.1 mouse_genomes_project 3 39578643 39630869 + MGP_129S1SvImJ_P0060679 Jade1 protein_coding protein_coding MGP_129S1SvImJ_T0060680.1 MGP_129S1SvImJ_G0027186.1 mouse_genomes_project 3 39578687 39605479 + Jade1 protein_coding processed_transcript MGP_129S1SvImJ_T0060681.1 MGP_129S1SvImJ_G0027186.1 mouse_genomes_project 3 39578709 39621433 + MGP_129S1SvImJ_P0060681 Jade1 protein_coding protein_coding MGP_129S1SvImJ_T0060682.1 MGP_129S1SvImJ_G0027186.1 mouse_genomes_project 3 39594642 39602750 + Jade1 protein_coding retained_intron MGP_129S1SvImJ_T0060683.1 MGP_129S1SvImJ_G0027186.1 mouse_genomes_project 3 39605419 39613888 + Jade1 protein_coding retained_intron MGP_129S1SvImJ_T0060684.1 MGP_129S1SvImJ_G0027186.1 mouse_genomes_project 3 39607519 39619302 + Jade1 protein_coding retained_intron MGP_129S1SvImJ_T0060685.1 MGP_129S1SvImJ_G0027186.1 mouse_genomes_project 3 39610383 39619538 + MGP_129S1SvImJ_P0060685 Jade1 protein_coding protein_coding MGP_129S1SvImJ_T0060686.1 MGP_129S1SvImJ_G0027186.1 mouse_genomes_project 3 39617167 39619545 + Jade1 protein_coding processed_transcript MGP_129S1SvImJ_T0011555.1 MGP_129S1SvImJ_G0009671.1 mouse_genomes_project 3 32238446 32238660 + Gm27403 misc_RNA misc_RNA MGP_129S1SvImJ_T0060336.1 MGP_129S1SvImJ_G0027127.1 mouse_genomes_project 3 28295635 28326409 + MGP_129S1SvImJ_P0060336 Sec62 protein_coding protein_coding MGP_129S1SvImJ_T0060337.1 MGP_129S1SvImJ_G0027127.1 mouse_genomes_project 3 28296096 28304283 + Sec62 protein_coding retained_intron MGP_129S1SvImJ_T0060338.1 MGP_129S1SvImJ_G0027127.1 mouse_genomes_project 3 28323996 28325178 + Sec62 protein_coding processed_transcript MGP_129S1SvImJ_T0060950.1 MGP_129S1SvImJ_G0027237.1 mouse_genomes_project 3 57421948 57439392 + MGP_129S1SvImJ_P0060950 protein_coding protein_coding MGP_129S1SvImJ_T0060951.1 MGP_129S1SvImJ_G0027237.1 mouse_genomes_project 3 57422010 57435486 + protein_coding retained_intron MGP_129S1SvImJ_T0014306.1 MGP_129S1SvImJ_G0012395.1 mouse_genomes_project 3 125817717 125818450 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063707.1 MGP_129S1SvImJ_G0027867.1 mouse_genomes_project 3 130393515 130421715 - MGP_129S1SvImJ_P0063707 5730508B09Rik protein_coding protein_coding MGP_129S1SvImJ_T0063708.1 MGP_129S1SvImJ_G0027867.1 mouse_genomes_project 3 130394137 130421679 - MGP_129S1SvImJ_P0063708 5730508B09Rik protein_coding protein_coding MGP_129S1SvImJ_T0014291.1 MGP_129S1SvImJ_G0012380.1 mouse_genomes_project 3 121874561 121874739 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004283.1 MGP_129S1SvImJ_G0003768.1 mouse_genomes_project 3 83634045 83653080 - Gm26771 antisense antisense MGP_129S1SvImJ_T0061458.1 MGP_129S1SvImJ_G0027364.1 mouse_genomes_project 3 87626759 87641481 + MGP_129S1SvImJ_P0061458 Etv3 protein_coding protein_coding MGP_129S1SvImJ_T0061459.1 MGP_129S1SvImJ_G0027364.1 mouse_genomes_project 3 87626930 87641467 + MGP_129S1SvImJ_P0061459 Etv3 protein_coding protein_coding MGP_129S1SvImJ_T0061460.1 MGP_129S1SvImJ_G0027364.1 mouse_genomes_project 3 87626959 87641481 + Etv3 protein_coding retained_intron MGP_129S1SvImJ_T0061461.1 MGP_129S1SvImJ_G0027364.1 mouse_genomes_project 3 87626966 87632397 + MGP_129S1SvImJ_P0061461 Etv3 protein_coding protein_coding MGP_129S1SvImJ_T0061462.1 MGP_129S1SvImJ_G0027364.1 mouse_genomes_project 3 87626970 87632400 + Etv3 protein_coding retained_intron MGP_129S1SvImJ_T0014170.1 MGP_129S1SvImJ_G0012259.1 mouse_genomes_project 3 87135902 87136211 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060408.1 MGP_129S1SvImJ_G0027141.1 mouse_genomes_project 3 30329002 30340892 + MGP_129S1SvImJ_P0060408 Actl6a protein_coding protein_coding MGP_129S1SvImJ_T0060409.1 MGP_129S1SvImJ_G0027141.1 mouse_genomes_project 3 30331234 30350756 + MGP_129S1SvImJ_P0060409 Actl6a protein_coding protein_coding MGP_129S1SvImJ_T0060410.1 MGP_129S1SvImJ_G0027141.1 mouse_genomes_project 3 30331277 30332734 + Actl6a protein_coding retained_intron MGP_129S1SvImJ_T0060411.1 MGP_129S1SvImJ_G0027141.1 mouse_genomes_project 3 30331492 30340886 + MGP_129S1SvImJ_P0060411 Actl6a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060412.1 MGP_129S1SvImJ_G0027141.1 mouse_genomes_project 3 30331891 30340935 + MGP_129S1SvImJ_P0060412 Actl6a protein_coding protein_coding MGP_129S1SvImJ_T0060413.1 MGP_129S1SvImJ_G0027141.1 mouse_genomes_project 3 30334121 30334909 + Actl6a protein_coding retained_intron MGP_129S1SvImJ_T0060414.1 MGP_129S1SvImJ_G0027141.1 mouse_genomes_project 3 30334910 30350556 + MGP_129S1SvImJ_P0060414 Actl6a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060415.1 MGP_129S1SvImJ_G0027141.1 mouse_genomes_project 3 30340845 30350751 + Actl6a protein_coding retained_intron MGP_129S1SvImJ_T0001169.1 MGP_129S1SvImJ_G0001095.1 mouse_genomes_project 3 33710705 33711529 - TEC TEC MGP_129S1SvImJ_T0001254.1 MGP_129S1SvImJ_G0001178.1 mouse_genomes_project 3 64992636 64994197 - TEC TEC MGP_129S1SvImJ_T0014278.1 MGP_129S1SvImJ_G0012367.1 mouse_genomes_project 3 116354983 116355335 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014277.1 MGP_129S1SvImJ_G0012366.1 mouse_genomes_project 3 115636197 115637849 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061687.1 MGP_129S1SvImJ_G0027405.1 mouse_genomes_project 3 88831078 88832323 - MGP_129S1SvImJ_P0061687 Rxfp4 protein_coding protein_coding MGP_129S1SvImJ_T0061275.1 MGP_129S1SvImJ_G0027317.1 mouse_genomes_project 3 79518986 79553808 - MGP_129S1SvImJ_P0061275 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0061276.1 MGP_129S1SvImJ_G0027317.1 mouse_genomes_project 3 79537010 79563550 - MGP_129S1SvImJ_P0061276 protein_coding protein_coding MGP_129S1SvImJ_T0061277.1 MGP_129S1SvImJ_G0027317.1 mouse_genomes_project 3 79544082 79563545 - MGP_129S1SvImJ_P0061277 protein_coding protein_coding MGP_129S1SvImJ_T0061278.1 MGP_129S1SvImJ_G0027317.1 mouse_genomes_project 3 79544211 79553836 - protein_coding processed_transcript MGP_129S1SvImJ_T0099790.1 MGP_129S1SvImJ_G0037857.1 mouse_genomes_project 3 134822631 134822738 - Gm22421 snRNA snRNA MGP_129S1SvImJ_T0060610.1 MGP_129S1SvImJ_G0027173.1 mouse_genomes_project 3 35505274 35509242 + MGP_129S1SvImJ_P0060610 Spry1 protein_coding protein_coding MGP_129S1SvImJ_T0060611.1 MGP_129S1SvImJ_G0027173.1 mouse_genomes_project 3 35505275 35509242 + MGP_129S1SvImJ_P0060611 Spry1 protein_coding protein_coding MGP_129S1SvImJ_T0060612.1 MGP_129S1SvImJ_G0027173.1 mouse_genomes_project 3 35505287 35509242 + MGP_129S1SvImJ_P0060612 Spry1 protein_coding protein_coding MGP_129S1SvImJ_T0014145.1 MGP_129S1SvImJ_G0012234.1 mouse_genomes_project 3 77662043 77662484 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007578.1 MGP_129S1SvImJ_G0006206.1 mouse_genomes_project 3 70103906 70139269 - Gm6634 lincRNA lincRNA MGP_129S1SvImJ_T0004419.1 MGP_129S1SvImJ_G0003858.1 mouse_genomes_project 3 155945752 155946692 + Gm43455 antisense antisense MGP_129S1SvImJ_T0004420.1 MGP_129S1SvImJ_G0003858.1 mouse_genomes_project 3 155945966 155946692 + Gm43455 antisense antisense MGP_129S1SvImJ_T0004386.1 MGP_129S1SvImJ_G0003835.1 mouse_genomes_project 3 132188139 132192765 - Gm35986 antisense antisense MGP_129S1SvImJ_T0004387.1 MGP_129S1SvImJ_G0003835.1 mouse_genomes_project 3 132188304 132193044 - Gm35986 antisense antisense MGP_129S1SvImJ_T0062577.1 MGP_129S1SvImJ_G0027622.1 mouse_genomes_project 3 97476967 97480104 + MGP_129S1SvImJ_P0062577 Ankrd34a protein_coding protein_coding MGP_129S1SvImJ_T0063143.1 MGP_129S1SvImJ_G0027758.1 mouse_genomes_project 3 109449790 109455274 - MGP_129S1SvImJ_P0063143 Gstm7 protein_coding protein_coding MGP_129S1SvImJ_T0063144.1 MGP_129S1SvImJ_G0027758.1 mouse_genomes_project 3 109450163 109455124 - MGP_129S1SvImJ_P0063144 Gstm7 protein_coding protein_coding MGP_129S1SvImJ_T0063145.1 MGP_129S1SvImJ_G0027758.1 mouse_genomes_project 3 109450266 109455071 - MGP_129S1SvImJ_P0063145 Gstm7 protein_coding protein_coding MGP_129S1SvImJ_T0063146.1 MGP_129S1SvImJ_G0027758.1 mouse_genomes_project 3 109452519 109455036 - MGP_129S1SvImJ_P0063146 Gstm7 protein_coding protein_coding MGP_129S1SvImJ_T0063147.1 MGP_129S1SvImJ_G0027758.1 mouse_genomes_project 3 109452588 109455067 - MGP_129S1SvImJ_P0063147 Gstm7 protein_coding protein_coding MGP_129S1SvImJ_T0101064.1 MGP_129S1SvImJ_G0039131.1 mouse_genomes_project 3 122763621 122763749 - Gm25013 snoRNA snoRNA MGP_129S1SvImJ_T0014255.1 MGP_129S1SvImJ_G0012344.1 mouse_genomes_project 3 109546695 109547364 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010512.1 MGP_129S1SvImJ_G0008628.1 mouse_genomes_project 3 17451360 17451430 - Mir7007 miRNA miRNA MGP_129S1SvImJ_T0014190.1 MGP_129S1SvImJ_G0012279.1 mouse_genomes_project 3 93721754 93724547 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014079.1 MGP_129S1SvImJ_G0012168.1 mouse_genomes_project 3 58303190 58304864 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004388.1 MGP_129S1SvImJ_G0003836.1 mouse_genomes_project 3 132396313 132407646 + Gm42697 antisense antisense MGP_129S1SvImJ_T0004308.1 MGP_129S1SvImJ_G0003787.1 mouse_genomes_project 3 95678220 95683874 - Gm15265 antisense antisense MGP_129S1SvImJ_T0004309.1 MGP_129S1SvImJ_G0003787.1 mouse_genomes_project 3 95678254 95684297 - Gm15265 antisense antisense MGP_129S1SvImJ_T0063035.1 MGP_129S1SvImJ_G0027728.1 mouse_genomes_project 3 107408474 107416463 - MGP_129S1SvImJ_P0063035 Chil5 protein_coding protein_coding MGP_129S1SvImJ_T0063036.1 MGP_129S1SvImJ_G0027728.1 mouse_genomes_project 3 107408520 107416468 - MGP_129S1SvImJ_P0063036 Chil5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063037.1 MGP_129S1SvImJ_G0027728.1 mouse_genomes_project 3 107408687 107428861 - MGP_129S1SvImJ_P0063037 Chil5 protein_coding protein_coding MGP_129S1SvImJ_T0014337.1 MGP_129S1SvImJ_G0012426.1 mouse_genomes_project 3 137828957 137829474 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018003.1 MGP_129S1SvImJ_G0015511.1 mouse_genomes_project 3 95695055 95697555 + 4930481B07Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018004.1 MGP_129S1SvImJ_G0015511.1 mouse_genomes_project 3 95695679 95700635 + 4930481B07Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0007787.1 MGP_129S1SvImJ_G0006369.1 mouse_genomes_project 3 155824128 155828595 + Gm43619 lincRNA lincRNA MGP_129S1SvImJ_T0007632.1 MGP_129S1SvImJ_G0006243.1 mouse_genomes_project 3 96116678 96124984 - lincRNA lincRNA MGP_129S1SvImJ_T0001404.1 MGP_129S1SvImJ_G0001327.1 mouse_genomes_project 3 157224520 157227838 - TEC TEC MGP_129S1SvImJ_T0062324.1 MGP_129S1SvImJ_G0027568.1 mouse_genomes_project 3 95817718 95821928 + MGP_129S1SvImJ_P0062324 Tmod4 protein_coding protein_coding MGP_129S1SvImJ_T0062325.1 MGP_129S1SvImJ_G0027568.1 mouse_genomes_project 3 95817756 95823484 + MGP_129S1SvImJ_P0062325 Tmod4 protein_coding protein_coding MGP_129S1SvImJ_T0062326.1 MGP_129S1SvImJ_G0027568.1 mouse_genomes_project 3 95817757 95823480 + MGP_129S1SvImJ_P0062326 Tmod4 protein_coding protein_coding MGP_129S1SvImJ_T0062327.1 MGP_129S1SvImJ_G0027568.1 mouse_genomes_project 3 95819446 95823019 + Tmod4 protein_coding retained_intron MGP_129S1SvImJ_T0062328.1 MGP_129S1SvImJ_G0027568.1 mouse_genomes_project 3 95821444 95822141 + Tmod4 protein_coding processed_transcript MGP_129S1SvImJ_T0062329.1 MGP_129S1SvImJ_G0027568.1 mouse_genomes_project 3 95821927 95823483 + Tmod4 protein_coding retained_intron MGP_129S1SvImJ_T0061564.1 MGP_129S1SvImJ_G0027387.1 mouse_genomes_project 3 88433779 88447930 - MGP_129S1SvImJ_P0061564 Tsacc protein_coding protein_coding MGP_129S1SvImJ_T0061565.1 MGP_129S1SvImJ_G0027387.1 mouse_genomes_project 3 88433782 88447769 - MGP_129S1SvImJ_P0061565 Tsacc protein_coding protein_coding MGP_129S1SvImJ_T0013998.1 MGP_129S1SvImJ_G0012087.1 mouse_genomes_project 3 31834621 31835516 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060529.1 MGP_129S1SvImJ_G0027161.1 mouse_genomes_project 3 34368174 34375409 - MGP_129S1SvImJ_P0060529 Ccna2 protein_coding protein_coding MGP_129S1SvImJ_T0060530.1 MGP_129S1SvImJ_G0027161.1 mouse_genomes_project 3 34368954 34370171 - Ccna2 protein_coding processed_transcript MGP_129S1SvImJ_T0060531.1 MGP_129S1SvImJ_G0027161.1 mouse_genomes_project 3 34369298 34374810 - MGP_129S1SvImJ_P0060531 Ccna2 protein_coding protein_coding MGP_129S1SvImJ_T0060532.1 MGP_129S1SvImJ_G0027161.1 mouse_genomes_project 3 34369298 34375186 - MGP_129S1SvImJ_P0060532 Ccna2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060533.1 MGP_129S1SvImJ_G0027161.1 mouse_genomes_project 3 34373705 34375223 - Ccna2 protein_coding retained_intron MGP_129S1SvImJ_T0007454.1 MGP_129S1SvImJ_G0006117.1 mouse_genomes_project 3 5577740 5581071 - C230057A21Rik lincRNA lincRNA MGP_129S1SvImJ_T0007455.1 MGP_129S1SvImJ_G0006117.1 mouse_genomes_project 3 5577935 5581231 - C230057A21Rik lincRNA lincRNA MGP_129S1SvImJ_T0004330.1 MGP_129S1SvImJ_G0003801.1 mouse_genomes_project 3 101221412 101230216 - Spag17os antisense antisense MGP_129S1SvImJ_T0004331.1 MGP_129S1SvImJ_G0003801.1 mouse_genomes_project 3 101223387 101230216 - Spag17os antisense antisense MGP_129S1SvImJ_T0098874.1 MGP_129S1SvImJ_G0036952.1 mouse_genomes_project 3 95117582 95118460 - Gm43774 sense_intronic sense_intronic MGP_129S1SvImJ_T0102461.1 MGP_129S1SvImJ_G0040295.1 mouse_genomes_project 3 63164223 63167650 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0064397.1 MGP_129S1SvImJ_G0027996.1 mouse_genomes_project 3 157108086 157673113 - MGP_129S1SvImJ_P0064397 St6galnac3 protein_coding protein_coding MGP_129S1SvImJ_T0064398.1 MGP_129S1SvImJ_G0027996.1 mouse_genomes_project 3 157115185 157136352 - MGP_129S1SvImJ_P0064398 St6galnac3 protein_coding protein_coding MGP_129S1SvImJ_T0064399.1 MGP_129S1SvImJ_G0027996.1 mouse_genomes_project 3 157116436 157673052 - MGP_129S1SvImJ_P0064399 St6galnac3 protein_coding protein_coding MGP_129S1SvImJ_T0064400.1 MGP_129S1SvImJ_G0027996.1 mouse_genomes_project 3 157439016 157439882 - St6galnac3 protein_coding retained_intron MGP_129S1SvImJ_T0064401.1 MGP_129S1SvImJ_G0027996.1 mouse_genomes_project 3 157439271 157668941 - St6galnac3 protein_coding retained_intron MGP_129S1SvImJ_T0099782.1 MGP_129S1SvImJ_G0037849.1 mouse_genomes_project 3 112180203 112180308 - Gm26076 snRNA snRNA MGP_129S1SvImJ_T0001328.1 MGP_129S1SvImJ_G0001252.1 mouse_genomes_project 3 124850881 124853430 - TEC TEC MGP_129S1SvImJ_T0014077.1 MGP_129S1SvImJ_G0012166.1 mouse_genomes_project 3 57503783 57504890 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013982.1 MGP_129S1SvImJ_G0012071.1 mouse_genomes_project 3 23655693 23657660 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007790.1 MGP_129S1SvImJ_G0006371.1 mouse_genomes_project 3 157744077 157746862 - 5730460C07Rik lincRNA lincRNA MGP_129S1SvImJ_T0101058.1 MGP_129S1SvImJ_G0039125.1 mouse_genomes_project 3 113917947 113918073 - Gm25519 snoRNA snoRNA MGP_129S1SvImJ_T0062487.1 MGP_129S1SvImJ_G0027595.1 mouse_genomes_project 3 96604203 96634469 - MGP_129S1SvImJ_P0062487 Prpf3 protein_coding protein_coding MGP_129S1SvImJ_T0062488.1 MGP_129S1SvImJ_G0027595.1 mouse_genomes_project 3 96604668 96609743 - MGP_129S1SvImJ_P0062488 Prpf3 protein_coding protein_coding MGP_129S1SvImJ_T0062489.1 MGP_129S1SvImJ_G0027595.1 mouse_genomes_project 3 96604697 96628148 - Prpf3 protein_coding retained_intron MGP_129S1SvImJ_T0062490.1 MGP_129S1SvImJ_G0027595.1 mouse_genomes_project 3 96604701 96606886 - Prpf3 protein_coding retained_intron MGP_129S1SvImJ_T0062491.1 MGP_129S1SvImJ_G0027595.1 mouse_genomes_project 3 96604701 96634337 - MGP_129S1SvImJ_P0062491 Prpf3 protein_coding protein_coding MGP_129S1SvImJ_T0062492.1 MGP_129S1SvImJ_G0027595.1 mouse_genomes_project 3 96610566 96621985 - Prpf3 protein_coding processed_transcript MGP_129S1SvImJ_T0062493.1 MGP_129S1SvImJ_G0027595.1 mouse_genomes_project 3 96620622 96622994 - Prpf3 protein_coding retained_intron MGP_129S1SvImJ_T0062494.1 MGP_129S1SvImJ_G0027595.1 mouse_genomes_project 3 96626016 96632206 - MGP_129S1SvImJ_P0062494 Prpf3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062495.1 MGP_129S1SvImJ_G0027595.1 mouse_genomes_project 3 96628109 96634365 - Prpf3 protein_coding retained_intron MGP_129S1SvImJ_T0060008.1 MGP_129S1SvImJ_G0027048.1 mouse_genomes_project 3 3418168 3423900 - MGP_129S1SvImJ_P0060008 1700008P02Rik protein_coding protein_coding MGP_129S1SvImJ_T0064205.1 MGP_129S1SvImJ_G0027968.1 mouse_genomes_project 3 149627499 149677533 + MGP_129S1SvImJ_P0064205 Mcoln2 protein_coding protein_coding MGP_129S1SvImJ_T0064206.1 MGP_129S1SvImJ_G0027968.1 mouse_genomes_project 3 149627645 149652935 + Mcoln2 protein_coding retained_intron MGP_129S1SvImJ_T0064207.1 MGP_129S1SvImJ_G0027968.1 mouse_genomes_project 3 149627840 149677532 + MGP_129S1SvImJ_P0064207 Mcoln2 protein_coding protein_coding MGP_129S1SvImJ_T0064208.1 MGP_129S1SvImJ_G0027968.1 mouse_genomes_project 3 149670855 149674506 + MGP_129S1SvImJ_P0064208 Mcoln2 protein_coding protein_coding MGP_129S1SvImJ_T0064209.1 MGP_129S1SvImJ_G0027968.1 mouse_genomes_project 3 149674102 149677160 + Mcoln2 protein_coding retained_intron MGP_129S1SvImJ_T0060200.1 MGP_129S1SvImJ_G0027102.1 mouse_genomes_project 3 17485341 17513970 - MGP_129S1SvImJ_P0060200 Cpb1 protein_coding protein_coding MGP_129S1SvImJ_T0060201.1 MGP_129S1SvImJ_G0027102.1 mouse_genomes_project 3 17485488 17488185 - Cpb1 protein_coding retained_intron MGP_129S1SvImJ_T0060202.1 MGP_129S1SvImJ_G0027102.1 mouse_genomes_project 3 17502418 17504684 - Cpb1 protein_coding processed_transcript MGP_129S1SvImJ_T0099743.1 MGP_129S1SvImJ_G0037810.1 mouse_genomes_project 3 64638129 64638222 + Gm22279 snRNA snRNA MGP_129S1SvImJ_T0061068.1 MGP_129S1SvImJ_G0027270.1 mouse_genomes_project 3 64210071 64477230 + Kcnab1 protein_coding processed_transcript MGP_129S1SvImJ_T0061069.1 MGP_129S1SvImJ_G0027270.1 mouse_genomes_project 3 64210071 64490722 + MGP_129S1SvImJ_P0061069 Kcnab1 protein_coding protein_coding MGP_129S1SvImJ_T0061070.1 MGP_129S1SvImJ_G0027270.1 mouse_genomes_project 3 64302227 64490726 + Kcnab1 protein_coding processed_transcript MGP_129S1SvImJ_T0061071.1 MGP_129S1SvImJ_G0027270.1 mouse_genomes_project 3 64359300 64489587 + Kcnab1 protein_coding processed_transcript MGP_129S1SvImJ_T0061072.1 MGP_129S1SvImJ_G0027270.1 mouse_genomes_project 3 64406481 64468534 + Kcnab1 protein_coding processed_transcript MGP_129S1SvImJ_T0061073.1 MGP_129S1SvImJ_G0027270.1 mouse_genomes_project 3 64465194 64470268 + Kcnab1 protein_coding retained_intron MGP_129S1SvImJ_T0004424.1 MGP_129S1SvImJ_G0003862.1 mouse_genomes_project 3 157793847 157812554 - Asb17os antisense antisense MGP_129S1SvImJ_T0004425.1 MGP_129S1SvImJ_G0003862.1 mouse_genomes_project 3 157810717 157812577 - Asb17os antisense antisense MGP_129S1SvImJ_T0014127.1 MGP_129S1SvImJ_G0012216.1 mouse_genomes_project 3 70798751 70799192 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061826.1 MGP_129S1SvImJ_G0027426.1 mouse_genomes_project 3 89451554 89452782 + Krtcap2 protein_coding retained_intron MGP_129S1SvImJ_T0061827.1 MGP_129S1SvImJ_G0027426.1 mouse_genomes_project 3 89451926 89455320 + MGP_129S1SvImJ_P0061827 Krtcap2 protein_coding protein_coding MGP_129S1SvImJ_T0061828.1 MGP_129S1SvImJ_G0027426.1 mouse_genomes_project 3 89452022 89455298 + MGP_129S1SvImJ_P0061828 Krtcap2 protein_coding protein_coding MGP_129S1SvImJ_T0061829.1 MGP_129S1SvImJ_G0027426.1 mouse_genomes_project 3 89454455 89455311 + Krtcap2 protein_coding retained_intron MGP_129S1SvImJ_T0007571.1 MGP_129S1SvImJ_G0006199.1 mouse_genomes_project 3 62484377 62499290 + Gm34240 lincRNA lincRNA MGP_129S1SvImJ_T0014050.1 MGP_129S1SvImJ_G0012139.1 mouse_genomes_project 3 48722781 48723370 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101025.1 MGP_129S1SvImJ_G0039092.1 mouse_genomes_project 3 54723629 54723761 - Gm22784 snoRNA snoRNA MGP_129S1SvImJ_T0004384.1 MGP_129S1SvImJ_G0003833.1 mouse_genomes_project 3 130048644 130049977 - Gm43729 antisense antisense MGP_129S1SvImJ_T0062037.1 MGP_129S1SvImJ_G0027463.1 mouse_genomes_project 3 90700130 90743430 - MGP_129S1SvImJ_P0062037 Ints3 protein_coding protein_coding MGP_129S1SvImJ_T0062038.1 MGP_129S1SvImJ_G0027463.1 mouse_genomes_project 3 90700138 90743656 - MGP_129S1SvImJ_P0062038 Ints3 protein_coding protein_coding MGP_129S1SvImJ_T0062039.1 MGP_129S1SvImJ_G0027463.1 mouse_genomes_project 3 90700818 90711957 - Ints3 protein_coding retained_intron MGP_129S1SvImJ_T0062040.1 MGP_129S1SvImJ_G0027463.1 mouse_genomes_project 3 90700818 90743740 - MGP_129S1SvImJ_P0062040 Ints3 protein_coding protein_coding MGP_129S1SvImJ_T0062041.1 MGP_129S1SvImJ_G0027463.1 mouse_genomes_project 3 90703109 90709518 - Ints3 protein_coding retained_intron MGP_129S1SvImJ_T0062042.1 MGP_129S1SvImJ_G0027463.1 mouse_genomes_project 3 90709847 90711417 - Ints3 protein_coding retained_intron MGP_129S1SvImJ_T0062043.1 MGP_129S1SvImJ_G0027463.1 mouse_genomes_project 3 90716643 90743749 - Ints3 protein_coding retained_intron MGP_129S1SvImJ_T0007760.1 MGP_129S1SvImJ_G0006351.1 mouse_genomes_project 3 147568847 147569940 + Gm43446 lincRNA lincRNA MGP_129S1SvImJ_T0014135.1 MGP_129S1SvImJ_G0012224.1 mouse_genomes_project 3 73677488 73677825 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001349.1 MGP_129S1SvImJ_G0001273.1 mouse_genomes_project 3 129490698 129494859 - TEC TEC MGP_129S1SvImJ_T0007604.1 MGP_129S1SvImJ_G0006227.1 mouse_genomes_project 3 84257685 84282641 - 4930565D16Rik lincRNA lincRNA MGP_129S1SvImJ_T0062194.1 MGP_129S1SvImJ_G0027548.1 mouse_genomes_project 3 94971994 94977992 + MGP_129S1SvImJ_P0062194 Lingo4 protein_coding protein_coding MGP_129S1SvImJ_T0064532.1 MGP_129S1SvImJ_G0028017.1 mouse_genomes_project 3 162246573 162521590 - MGP_129S1SvImJ_P0064532 Lrrc7 protein_coding protein_coding MGP_129S1SvImJ_T0064533.1 MGP_129S1SvImJ_G0028017.1 mouse_genomes_project 3 162246577 162731624 - MGP_129S1SvImJ_P0064533 Lrrc7 protein_coding protein_coding MGP_129S1SvImJ_T0064534.1 MGP_129S1SvImJ_G0028017.1 mouse_genomes_project 3 162246801 162521610 - MGP_129S1SvImJ_P0064534 Lrrc7 protein_coding protein_coding MGP_129S1SvImJ_T0064535.1 MGP_129S1SvImJ_G0028017.1 mouse_genomes_project 3 162248121 162731624 - MGP_129S1SvImJ_P0064535 Lrrc7 protein_coding protein_coding MGP_129S1SvImJ_T0064536.1 MGP_129S1SvImJ_G0028017.1 mouse_genomes_project 3 162616459 162730745 - Lrrc7 protein_coding retained_intron MGP_129S1SvImJ_T0063386.1 MGP_129S1SvImJ_G0027812.1 mouse_genomes_project 3 118466322 118476469 + Lrrc39 protein_coding retained_intron MGP_129S1SvImJ_T0063387.1 MGP_129S1SvImJ_G0027812.1 mouse_genomes_project 3 118466327 118486480 + MGP_129S1SvImJ_P0063387 Lrrc39 protein_coding protein_coding MGP_129S1SvImJ_T0060952.1 MGP_129S1SvImJ_G0027238.1 mouse_genomes_project 3 57460397 57489178 - MGP_129S1SvImJ_P0060952 Erich6 protein_coding protein_coding MGP_129S1SvImJ_T0060953.1 MGP_129S1SvImJ_G0027238.1 mouse_genomes_project 3 57460407 57482723 - MGP_129S1SvImJ_P0060953 Erich6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0010522.1 MGP_129S1SvImJ_G0008638.1 mouse_genomes_project 3 32621777 32621884 - Mir6378 miRNA miRNA MGP_129S1SvImJ_T0011558.1 MGP_129S1SvImJ_G0009674.1 mouse_genomes_project 3 42013509 42013805 + Gm25714 misc_RNA misc_RNA MGP_129S1SvImJ_T0013962.1 MGP_129S1SvImJ_G0012051.1 mouse_genomes_project 3 15745545 15746746 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061918.1 MGP_129S1SvImJ_G0027446.1 mouse_genomes_project 3 90009991 90020288 + MGP_129S1SvImJ_P0061918 Ube2q1 protein_coding protein_coding MGP_129S1SvImJ_T0061919.1 MGP_129S1SvImJ_G0027446.1 mouse_genomes_project 3 90010139 90013699 + Ube2q1 protein_coding retained_intron MGP_129S1SvImJ_T0063247.1 MGP_129S1SvImJ_G0027783.1 mouse_genomes_project 3 110224611 110252801 + MGP_129S1SvImJ_P0063247 Clcc1 protein_coding protein_coding MGP_129S1SvImJ_T0063248.1 MGP_129S1SvImJ_G0027783.1 mouse_genomes_project 3 110224647 110235840 + Clcc1 protein_coding processed_transcript MGP_129S1SvImJ_T0063249.1 MGP_129S1SvImJ_G0027783.1 mouse_genomes_project 3 110224655 110240905 + Clcc1 protein_coding processed_transcript MGP_129S1SvImJ_T0063250.1 MGP_129S1SvImJ_G0027783.1 mouse_genomes_project 3 110224656 110252797 + MGP_129S1SvImJ_P0063250 Clcc1 protein_coding protein_coding MGP_129S1SvImJ_T0063251.1 MGP_129S1SvImJ_G0027783.1 mouse_genomes_project 3 110224656 110236389 + MGP_129S1SvImJ_P0063251 Clcc1 protein_coding protein_coding MGP_129S1SvImJ_T0063252.1 MGP_129S1SvImJ_G0027783.1 mouse_genomes_project 3 110224688 110251973 + MGP_129S1SvImJ_P0063252 Clcc1 protein_coding protein_coding MGP_129S1SvImJ_T0063253.1 MGP_129S1SvImJ_G0027783.1 mouse_genomes_project 3 110236032 110241643 + Clcc1 protein_coding processed_transcript MGP_129S1SvImJ_T0063254.1 MGP_129S1SvImJ_G0027783.1 mouse_genomes_project 3 110240678 110241649 + Clcc1 protein_coding retained_intron MGP_129S1SvImJ_T0099786.1 MGP_129S1SvImJ_G0037853.1 mouse_genomes_project 3 125702877 125703007 - Gm22713 snRNA snRNA MGP_129S1SvImJ_T0061063.1 MGP_129S1SvImJ_G0027265.1 mouse_genomes_project 3 63024286 63087543 + MGP_129S1SvImJ_P0061063 Gmps protein_coding protein_coding MGP_129S1SvImJ_T0101068.1 MGP_129S1SvImJ_G0039135.1 mouse_genomes_project 3 131116896 131117005 + Gm22293 snoRNA snoRNA MGP_129S1SvImJ_T0014120.1 MGP_129S1SvImJ_G0012209.1 mouse_genomes_project 3 68919099 68919496 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010536.1 MGP_129S1SvImJ_G0008652.1 mouse_genomes_project 3 85464998 85465116 + Mir466k miRNA miRNA MGP_129S1SvImJ_T0011553.1 MGP_129S1SvImJ_G0009669.1 mouse_genomes_project 3 21945827 21946093 + Gm24062 misc_RNA misc_RNA MGP_129S1SvImJ_T0061847.1 MGP_129S1SvImJ_G0027431.1 mouse_genomes_project 3 89543777 89548416 - MGP_129S1SvImJ_P0061847 Efna4 protein_coding protein_coding MGP_129S1SvImJ_T0101913.1 MGP_129S1SvImJ_G0039823.1 mouse_genomes_project 3 141395173 141403827 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101914.1 MGP_129S1SvImJ_G0039823.1 mouse_genomes_project 3 141397234 141410933 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101915.1 MGP_129S1SvImJ_G0039823.1 mouse_genomes_project 3 141405527 141412005 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0014185.1 MGP_129S1SvImJ_G0012274.1 mouse_genomes_project 3 92921807 92922111 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001140.1 MGP_129S1SvImJ_G0001066.1 mouse_genomes_project 3 18067482 18071535 + TEC TEC MGP_129S1SvImJ_T0001387.1 MGP_129S1SvImJ_G0001310.1 mouse_genomes_project 3 142059593 142061369 - TEC TEC MGP_129S1SvImJ_T0004368.1 MGP_129S1SvImJ_G0003820.1 mouse_genomes_project 3 118008462 118023521 + Gm43109 antisense antisense MGP_129S1SvImJ_T0062994.1 MGP_129S1SvImJ_G0027717.1 mouse_genomes_project 3 106816816 107046390 + MGP_129S1SvImJ_P0062994 Kcnd3 protein_coding protein_coding MGP_129S1SvImJ_T0062995.1 MGP_129S1SvImJ_G0027717.1 mouse_genomes_project 3 106817059 107039977 + Kcnd3 protein_coding retained_intron MGP_129S1SvImJ_T0062996.1 MGP_129S1SvImJ_G0027717.1 mouse_genomes_project 3 106817572 107041848 + MGP_129S1SvImJ_P0062996 Kcnd3 protein_coding protein_coding MGP_129S1SvImJ_T0062997.1 MGP_129S1SvImJ_G0027717.1 mouse_genomes_project 3 106823178 107041697 + MGP_129S1SvImJ_P0062997 Kcnd3 protein_coding protein_coding MGP_129S1SvImJ_T0062998.1 MGP_129S1SvImJ_G0027717.1 mouse_genomes_project 3 107041392 107042232 + Kcnd3 protein_coding processed_transcript MGP_129S1SvImJ_T0014054.1 MGP_129S1SvImJ_G0012143.1 mouse_genomes_project 3 50052952 50053265 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098886.1 MGP_129S1SvImJ_G0036964.1 mouse_genomes_project 3 102588028 102589100 + Gm42938 sense_intronic sense_intronic MGP_129S1SvImJ_T0014091.1 MGP_129S1SvImJ_G0012180.1 mouse_genomes_project 3 61027919 61030170 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010515.1 MGP_129S1SvImJ_G0008631.1 mouse_genomes_project 3 24915954 24916050 - Mir3092 miRNA miRNA MGP_129S1SvImJ_T0099746.1 MGP_129S1SvImJ_G0037813.1 mouse_genomes_project 3 66191145 66191252 + Gm22295 snRNA snRNA MGP_129S1SvImJ_T0007748.1 MGP_129S1SvImJ_G0006341.1 mouse_genomes_project 3 146830995 146832464 - Gm43616 lincRNA lincRNA MGP_129S1SvImJ_T0001389.1 MGP_129S1SvImJ_G0001312.1 mouse_genomes_project 3 146903596 146909632 + TEC TEC MGP_129S1SvImJ_T0062734.1 MGP_129S1SvImJ_G0027665.1 mouse_genomes_project 3 101257943 101283147 - MGP_129S1SvImJ_P0062734 Wdr3 protein_coding protein_coding MGP_129S1SvImJ_T0062735.1 MGP_129S1SvImJ_G0027665.1 mouse_genomes_project 3 101258498 101261385 - Wdr3 protein_coding retained_intron MGP_129S1SvImJ_T0062736.1 MGP_129S1SvImJ_G0027665.1 mouse_genomes_project 3 101262262 101283147 - Wdr3 protein_coding retained_intron MGP_129S1SvImJ_T0062737.1 MGP_129S1SvImJ_G0027665.1 mouse_genomes_project 3 101262264 101263346 - Wdr3 protein_coding retained_intron MGP_129S1SvImJ_T0062738.1 MGP_129S1SvImJ_G0027665.1 mouse_genomes_project 3 101276964 101283072 - MGP_129S1SvImJ_P0062738 Wdr3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062739.1 MGP_129S1SvImJ_G0027665.1 mouse_genomes_project 3 101276964 101283137 - MGP_129S1SvImJ_P0062739 Wdr3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0014084.1 MGP_129S1SvImJ_G0012173.1 mouse_genomes_project 3 58893821 58894336 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014364.1 MGP_129S1SvImJ_G0012453.1 mouse_genomes_project 3 144012269 144012633 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010530.1 MGP_129S1SvImJ_G0008646.1 mouse_genomes_project 3 64781234 64781373 + Mir8120 miRNA miRNA MGP_129S1SvImJ_T0014344.1 MGP_129S1SvImJ_G0012433.1 mouse_genomes_project 3 138899533 138899833 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061602.1 MGP_129S1SvImJ_G0027393.1 mouse_genomes_project 3 88524977 88529437 - MGP_129S1SvImJ_P0061602 protein_coding protein_coding MGP_129S1SvImJ_T0101035.1 MGP_129S1SvImJ_G0039102.1 mouse_genomes_project 3 78630109 78630241 + Gm23440 snoRNA snoRNA MGP_129S1SvImJ_T0060452.1 MGP_129S1SvImJ_G0027147.1 mouse_genomes_project 3 31437933 31483842 - MGP_129S1SvImJ_P0060452 Ccdc39 protein_coding protein_coding MGP_129S1SvImJ_T0060453.1 MGP_129S1SvImJ_G0027147.1 mouse_genomes_project 3 31438625 31440123 - Ccdc39 protein_coding retained_intron MGP_129S1SvImJ_T0060454.1 MGP_129S1SvImJ_G0027147.1 mouse_genomes_project 3 31444219 31483842 - Ccdc39 protein_coding retained_intron MGP_129S1SvImJ_T0060455.1 MGP_129S1SvImJ_G0027147.1 mouse_genomes_project 3 31445758 31483606 - Ccdc39 protein_coding retained_intron MGP_129S1SvImJ_T0060456.1 MGP_129S1SvImJ_G0027147.1 mouse_genomes_project 3 31461384 31463339 - Ccdc39 protein_coding retained_intron MGP_129S1SvImJ_T0060457.1 MGP_129S1SvImJ_G0027147.1 mouse_genomes_project 3 31475486 31483851 - Ccdc39 protein_coding retained_intron MGP_129S1SvImJ_T0060837.1 MGP_129S1SvImJ_G0027213.1 mouse_genomes_project 3 53412258 53413436 - MGP_129S1SvImJ_P0060837 Gm21958 protein_coding protein_coding MGP_129S1SvImJ_T0001352.1 MGP_129S1SvImJ_G0001276.1 mouse_genomes_project 3 129689396 129692596 - TEC TEC MGP_129S1SvImJ_T0060135.1 MGP_129S1SvImJ_G0027091.1 mouse_genomes_project 3 16382760 16412257 + MGP_129S1SvImJ_P0060135 Mtfr1 protein_coding protein_coding MGP_129S1SvImJ_T0060136.1 MGP_129S1SvImJ_G0027091.1 mouse_genomes_project 3 16382762 16416282 + MGP_129S1SvImJ_P0060136 Mtfr1 protein_coding protein_coding MGP_129S1SvImJ_T0060137.1 MGP_129S1SvImJ_G0027091.1 mouse_genomes_project 3 16382780 16415933 + MGP_129S1SvImJ_P0060137 Mtfr1 protein_coding protein_coding MGP_129S1SvImJ_T0060138.1 MGP_129S1SvImJ_G0027091.1 mouse_genomes_project 3 16383543 16417380 + MGP_129S1SvImJ_P0060138 Mtfr1 protein_coding protein_coding MGP_129S1SvImJ_T0060139.1 MGP_129S1SvImJ_G0027091.1 mouse_genomes_project 3 16383698 16416119 + MGP_129S1SvImJ_P0060139 Mtfr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060140.1 MGP_129S1SvImJ_G0027091.1 mouse_genomes_project 3 16383707 16412266 + MGP_129S1SvImJ_P0060140 Mtfr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060141.1 MGP_129S1SvImJ_G0027091.1 mouse_genomes_project 3 16383747 16408114 + MGP_129S1SvImJ_P0060141 Mtfr1 protein_coding protein_coding MGP_129S1SvImJ_T0060142.1 MGP_129S1SvImJ_G0027091.1 mouse_genomes_project 3 16408134 16412785 + Mtfr1 protein_coding retained_intron MGP_129S1SvImJ_T0007788.1 MGP_129S1SvImJ_G0006370.1 mouse_genomes_project 3 157071744 157092693 - Gm43832 lincRNA lincRNA MGP_129S1SvImJ_T0007789.1 MGP_129S1SvImJ_G0006370.1 mouse_genomes_project 3 157075258 157085329 - Gm43832 lincRNA lincRNA MGP_129S1SvImJ_T0063832.1 MGP_129S1SvImJ_G0027893.1 mouse_genomes_project 3 135458611 135625103 + MGP_129S1SvImJ_P0063832 Tbck protein_coding protein_coding MGP_129S1SvImJ_T0063833.1 MGP_129S1SvImJ_G0027893.1 mouse_genomes_project 3 135458635 135475223 + Tbck protein_coding retained_intron MGP_129S1SvImJ_T0063834.1 MGP_129S1SvImJ_G0027893.1 mouse_genomes_project 3 135458667 135583096 + Tbck protein_coding processed_transcript MGP_129S1SvImJ_T0063835.1 MGP_129S1SvImJ_G0027893.1 mouse_genomes_project 3 135573166 135621917 + Tbck protein_coding processed_transcript MGP_129S1SvImJ_T0098882.1 MGP_129S1SvImJ_G0036960.1 mouse_genomes_project 3 101745699 101749983 - Gm43462 sense_intronic sense_intronic MGP_129S1SvImJ_T0001262.1 MGP_129S1SvImJ_G0001186.1 mouse_genomes_project 3 74485311 74487530 - TEC TEC MGP_129S1SvImJ_T0063294.1 MGP_129S1SvImJ_G0027791.1 mouse_genomes_project 3 110563940 110620863 - MGP_129S1SvImJ_P0063294 Fam102b protein_coding protein_coding MGP_129S1SvImJ_T0014019.1 MGP_129S1SvImJ_G0012108.1 mouse_genomes_project 3 37043557 37043930 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007683.1 MGP_129S1SvImJ_G0006288.1 mouse_genomes_project 3 120459167 120460395 + Gm9916 lincRNA lincRNA MGP_129S1SvImJ_T0007715.1 MGP_129S1SvImJ_G0006311.1 mouse_genomes_project 3 135202033 135203820 - Gm42880 lincRNA lincRNA MGP_129S1SvImJ_T0014395.1 MGP_129S1SvImJ_G0012484.1 mouse_genomes_project 3 162037214 162037624 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001145.1 MGP_129S1SvImJ_G0001071.1 mouse_genomes_project 3 26592954 26595030 + TEC TEC MGP_129S1SvImJ_T0007565.1 MGP_129S1SvImJ_G0006195.1 mouse_genomes_project 3 56932847 56980856 + 4921539H07Rik lincRNA lincRNA MGP_129S1SvImJ_T0007567.1 MGP_129S1SvImJ_G0006195.1 mouse_genomes_project 3 56979714 56983399 + 4921539H07Rik lincRNA lincRNA MGP_129S1SvImJ_T0062497.1 MGP_129S1SvImJ_G0027597.1 mouse_genomes_project 3 96661548 96664580 - MGP_129S1SvImJ_P0062497 Ciart protein_coding protein_coding MGP_129S1SvImJ_T0062498.1 MGP_129S1SvImJ_G0027597.1 mouse_genomes_project 3 96661556 96665260 - MGP_129S1SvImJ_P0062498 Ciart protein_coding protein_coding MGP_129S1SvImJ_T0062499.1 MGP_129S1SvImJ_G0027597.1 mouse_genomes_project 3 96661558 96665286 - MGP_129S1SvImJ_P0062499 Ciart protein_coding protein_coding MGP_129S1SvImJ_T0062500.1 MGP_129S1SvImJ_G0027597.1 mouse_genomes_project 3 96661858 96665306 - MGP_129S1SvImJ_P0062500 Ciart protein_coding protein_coding MGP_129S1SvImJ_T0062501.1 MGP_129S1SvImJ_G0027597.1 mouse_genomes_project 3 96662564 96664301 - MGP_129S1SvImJ_P0062501 Ciart protein_coding protein_coding MGP_129S1SvImJ_T0062502.1 MGP_129S1SvImJ_G0027597.1 mouse_genomes_project 3 96663727 96665129 - MGP_129S1SvImJ_P0062502 Ciart protein_coding protein_coding MGP_129S1SvImJ_T0064171.1 MGP_129S1SvImJ_G0027959.1 mouse_genomes_project 3 148695107 148981267 + MGP_129S1SvImJ_P0064171 Col24a1 protein_coding protein_coding MGP_129S1SvImJ_T0064172.1 MGP_129S1SvImJ_G0027959.1 mouse_genomes_project 3 148695162 148723876 + MGP_129S1SvImJ_P0064172 Col24a1 protein_coding protein_coding MGP_129S1SvImJ_T0064173.1 MGP_129S1SvImJ_G0027959.1 mouse_genomes_project 3 148940624 148968013 + Col24a1 protein_coding processed_transcript MGP_129S1SvImJ_T0064174.1 MGP_129S1SvImJ_G0027959.1 mouse_genomes_project 3 148974231 148981262 + Col24a1 protein_coding retained_intron MGP_129S1SvImJ_T0064287.1 MGP_129S1SvImJ_G0027982.1 mouse_genomes_project 3 155235103 155348254 + MGP_129S1SvImJ_P0064287 Adgrl4 protein_coding protein_coding MGP_129S1SvImJ_T0064288.1 MGP_129S1SvImJ_G0027982.1 mouse_genomes_project 3 155235145 155301275 + MGP_129S1SvImJ_P0064288 Adgrl4 protein_coding protein_coding MGP_129S1SvImJ_T0064289.1 MGP_129S1SvImJ_G0027982.1 mouse_genomes_project 3 155235490 155299071 + Adgrl4 protein_coding processed_transcript MGP_129S1SvImJ_T0064290.1 MGP_129S1SvImJ_G0027982.1 mouse_genomes_project 3 155236312 155301246 + Adgrl4 protein_coding retained_intron MGP_129S1SvImJ_T0064291.1 MGP_129S1SvImJ_G0027982.1 mouse_genomes_project 3 155301149 155308514 + Adgrl4 protein_coding processed_transcript MGP_129S1SvImJ_T0064292.1 MGP_129S1SvImJ_G0027982.1 mouse_genomes_project 3 155318502 155323212 + Adgrl4 protein_coding processed_transcript MGP_129S1SvImJ_T0062094.1 MGP_129S1SvImJ_G0027476.1 mouse_genomes_project 3 90941516 90944772 + MGP_129S1SvImJ_P0062094 S100a5 protein_coding protein_coding MGP_129S1SvImJ_T0062095.1 MGP_129S1SvImJ_G0027476.1 mouse_genomes_project 3 90942801 90944772 + MGP_129S1SvImJ_P0062095 S100a5 protein_coding protein_coding MGP_129S1SvImJ_T0010559.1 MGP_129S1SvImJ_G0008675.1 mouse_genomes_project 3 119299672 119299737 + Gm22408 miRNA miRNA MGP_129S1SvImJ_T0001149.1 MGP_129S1SvImJ_G0001075.1 mouse_genomes_project 3 27741400 27743523 - TEC TEC MGP_129S1SvImJ_T0004265.1 MGP_129S1SvImJ_G0003755.1 mouse_genomes_project 3 59965799 59967947 - Gm37035 antisense antisense MGP_129S1SvImJ_T0098889.1 MGP_129S1SvImJ_G0036967.1 mouse_genomes_project 3 103354304 103355593 + Gm43244 sense_intronic sense_intronic MGP_129S1SvImJ_T0001260.1 MGP_129S1SvImJ_G0001184.1 mouse_genomes_project 3 72434378 72436243 - TEC TEC MGP_129S1SvImJ_T0001309.1 MGP_129S1SvImJ_G0001233.1 mouse_genomes_project 3 113484610 113486221 + TEC TEC MGP_129S1SvImJ_T0007750.1 MGP_129S1SvImJ_G0006343.1 mouse_genomes_project 3 146859227 146880978 + Gm42703 lincRNA lincRNA MGP_129S1SvImJ_T0014215.1 MGP_129S1SvImJ_G0012304.1 mouse_genomes_project 3 99248489 99248977 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101038.1 MGP_129S1SvImJ_G0039105.1 mouse_genomes_project 3 86133064 86133186 + Gm25188 snoRNA snoRNA MGP_129S1SvImJ_T0018040.1 MGP_129S1SvImJ_G0015524.1 mouse_genomes_project 3 125815327 125816180 - Snhg8 processed_transcript lincRNA MGP_129S1SvImJ_T0018041.1 MGP_129S1SvImJ_G0015524.1 mouse_genomes_project 3 125815330 125816106 - Snhg8 processed_transcript retained_intron MGP_129S1SvImJ_T0018042.1 MGP_129S1SvImJ_G0015524.1 mouse_genomes_project 3 125815332 125816109 - Snhg8 processed_transcript lincRNA MGP_129S1SvImJ_T0063100.1 MGP_129S1SvImJ_G0027748.1 mouse_genomes_project 3 108932147 108953570 - MGP_129S1SvImJ_P0063100 Kcnc4 protein_coding protein_coding MGP_129S1SvImJ_T0014202.1 MGP_129S1SvImJ_G0012291.1 mouse_genomes_project 3 96141740 96142141 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060779.1 MGP_129S1SvImJ_G0027202.1 mouse_genomes_project 3 50796903 50885412 + MGP_129S1SvImJ_P0060779 Foxo1 protein_coding protein_coding MGP_129S1SvImJ_T0060177.1 MGP_129S1SvImJ_G0027098.1 mouse_genomes_project 3 17199739 17243466 - MGP_129S1SvImJ_P0060177 Hps3 protein_coding protein_coding MGP_129S1SvImJ_T0060178.1 MGP_129S1SvImJ_G0027098.1 mouse_genomes_project 3 17199745 17243431 - Hps3 protein_coding retained_intron MGP_129S1SvImJ_T0060179.1 MGP_129S1SvImJ_G0027098.1 mouse_genomes_project 3 17200522 17218162 - Hps3 protein_coding processed_transcript MGP_129S1SvImJ_T0060180.1 MGP_129S1SvImJ_G0027098.1 mouse_genomes_project 3 17200525 17243453 - MGP_129S1SvImJ_P0060180 Hps3 protein_coding protein_coding MGP_129S1SvImJ_T0060181.1 MGP_129S1SvImJ_G0027098.1 mouse_genomes_project 3 17206723 17216968 - Hps3 protein_coding processed_transcript MGP_129S1SvImJ_T0060182.1 MGP_129S1SvImJ_G0027098.1 mouse_genomes_project 3 17215265 17243453 - Hps3 protein_coding retained_intron MGP_129S1SvImJ_T0060183.1 MGP_129S1SvImJ_G0027098.1 mouse_genomes_project 3 17216560 17243445 - Hps3 protein_coding retained_intron MGP_129S1SvImJ_T0060184.1 MGP_129S1SvImJ_G0027098.1 mouse_genomes_project 3 17218987 17243453 - Hps3 protein_coding retained_intron MGP_129S1SvImJ_T0060185.1 MGP_129S1SvImJ_G0027098.1 mouse_genomes_project 3 17219252 17243447 - Hps3 protein_coding processed_transcript MGP_129S1SvImJ_T0060186.1 MGP_129S1SvImJ_G0027098.1 mouse_genomes_project 3 17220395 17243445 - Hps3 protein_coding retained_intron MGP_129S1SvImJ_T0060187.1 MGP_129S1SvImJ_G0027098.1 mouse_genomes_project 3 17242978 17243453 - Hps3 protein_coding processed_transcript MGP_129S1SvImJ_T0101029.1 MGP_129S1SvImJ_G0039096.1 mouse_genomes_project 3 64005660 64005786 - Gm25222 snoRNA snoRNA MGP_129S1SvImJ_T0001287.1 MGP_129S1SvImJ_G0001211.1 mouse_genomes_project 3 97076546 97078160 + TEC TEC MGP_129S1SvImJ_T0063851.1 MGP_129S1SvImJ_G0027897.1 mouse_genomes_project 3 135898201 136025864 - MGP_129S1SvImJ_P0063851 protein_coding protein_coding MGP_129S1SvImJ_T0063852.1 MGP_129S1SvImJ_G0027897.1 mouse_genomes_project 3 135902358 135926426 - MGP_129S1SvImJ_P0063852 protein_coding protein_coding MGP_129S1SvImJ_T0063853.1 MGP_129S1SvImJ_G0027897.1 mouse_genomes_project 3 135951183 136025864 - MGP_129S1SvImJ_P0063853 protein_coding protein_coding MGP_129S1SvImJ_T0063854.1 MGP_129S1SvImJ_G0027897.1 mouse_genomes_project 3 135963911 136025924 - MGP_129S1SvImJ_P0063854 protein_coding protein_coding MGP_129S1SvImJ_T0014326.1 MGP_129S1SvImJ_G0012415.1 mouse_genomes_project 3 134081273 134082291 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099722.1 MGP_129S1SvImJ_G0037789.1 mouse_genomes_project 3 16765489 16765653 + Gm23330 snRNA snRNA MGP_129S1SvImJ_T0060050.1 MGP_129S1SvImJ_G0027062.1 mouse_genomes_project 3 7159404 7163016 - MGP_129S1SvImJ_P0060050 protein_coding protein_coding MGP_129S1SvImJ_T0060051.1 MGP_129S1SvImJ_G0027062.1 mouse_genomes_project 3 7159406 7163077 - MGP_129S1SvImJ_P0060051 protein_coding protein_coding MGP_129S1SvImJ_T0060052.1 MGP_129S1SvImJ_G0027062.1 mouse_genomes_project 3 7159409 7163016 - MGP_129S1SvImJ_P0060052 protein_coding protein_coding MGP_129S1SvImJ_T0001269.1 MGP_129S1SvImJ_G0001193.1 mouse_genomes_project 3 78072218 78073858 - TEC TEC MGP_129S1SvImJ_T0099752.1 MGP_129S1SvImJ_G0037819.1 mouse_genomes_project 3 85930159 85930266 - Gm26204 snRNA snRNA MGP_129S1SvImJ_T0001148.1 MGP_129S1SvImJ_G0001074.1 mouse_genomes_project 3 27697313 27699429 - TEC TEC MGP_129S1SvImJ_T0014342.1 MGP_129S1SvImJ_G0012431.1 mouse_genomes_project 3 138424317 138426457 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062044.1 MGP_129S1SvImJ_G0027464.1 mouse_genomes_project 3 90763062 90780093 - MGP_129S1SvImJ_P0062044 Npr1 protein_coding protein_coding MGP_129S1SvImJ_T0062045.1 MGP_129S1SvImJ_G0027464.1 mouse_genomes_project 3 90763181 90764253 - Npr1 protein_coding retained_intron MGP_129S1SvImJ_T0062046.1 MGP_129S1SvImJ_G0027464.1 mouse_genomes_project 3 90767546 90771702 - Npr1 protein_coding processed_transcript MGP_129S1SvImJ_T0062047.1 MGP_129S1SvImJ_G0027464.1 mouse_genomes_project 3 90771624 90773165 - Npr1 protein_coding retained_intron MGP_129S1SvImJ_T0062048.1 MGP_129S1SvImJ_G0027464.1 mouse_genomes_project 3 90771643 90775647 - MGP_129S1SvImJ_P0062048 Npr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0014102.1 MGP_129S1SvImJ_G0012191.1 mouse_genomes_project 3 65103090 65103340 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007636.1 MGP_129S1SvImJ_G0006247.1 mouse_genomes_project 3 97213848 97236427 + lincRNA lincRNA MGP_129S1SvImJ_T0010572.1 MGP_129S1SvImJ_G0008688.1 mouse_genomes_project 3 138013974 138014080 + Gm24048 miRNA miRNA MGP_129S1SvImJ_T0004394.1 MGP_129S1SvImJ_G0003842.1 mouse_genomes_project 3 136647102 136904023 - antisense antisense MGP_129S1SvImJ_T0004395.1 MGP_129S1SvImJ_G0003842.1 mouse_genomes_project 3 136762718 137052553 - antisense antisense MGP_129S1SvImJ_T0004396.1 MGP_129S1SvImJ_G0003842.1 mouse_genomes_project 3 136959286 137052700 - antisense antisense MGP_129S1SvImJ_T0001203.1 MGP_129S1SvImJ_G0001129.1 mouse_genomes_project 3 49415046 49416322 - TEC TEC MGP_129S1SvImJ_T0099741.1 MGP_129S1SvImJ_G0037808.1 mouse_genomes_project 3 62529563 62529669 + Gm24946 snRNA snRNA MGP_129S1SvImJ_T0001158.1 MGP_129S1SvImJ_G0001084.1 mouse_genomes_project 3 30345559 30345872 - TEC TEC MGP_129S1SvImJ_T0007554.1 MGP_129S1SvImJ_G0006187.1 mouse_genomes_project 3 51355352 51365511 - Gm30292 lincRNA lincRNA MGP_129S1SvImJ_T0007703.1 MGP_129S1SvImJ_G0006301.1 mouse_genomes_project 3 131199238 131488136 + lincRNA lincRNA MGP_129S1SvImJ_T0014263.1 MGP_129S1SvImJ_G0012352.1 mouse_genomes_project 3 112016315 112016958 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060063.1 MGP_129S1SvImJ_G0027066.1 mouse_genomes_project 3 7302548 7317880 - MGP_129S1SvImJ_P0060063 Gm38303 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061576.1 MGP_129S1SvImJ_G0027389.1 mouse_genomes_project 3 88477779 88484036 + MGP_129S1SvImJ_P0061576 Glmp protein_coding protein_coding MGP_129S1SvImJ_T0061577.1 MGP_129S1SvImJ_G0027389.1 mouse_genomes_project 3 88477811 88482234 + Glmp protein_coding retained_intron MGP_129S1SvImJ_T0061578.1 MGP_129S1SvImJ_G0027389.1 mouse_genomes_project 3 88477814 88479335 + Glmp protein_coding retained_intron MGP_129S1SvImJ_T0061579.1 MGP_129S1SvImJ_G0027389.1 mouse_genomes_project 3 88477816 88480310 + Glmp protein_coding retained_intron MGP_129S1SvImJ_T0061580.1 MGP_129S1SvImJ_G0027389.1 mouse_genomes_project 3 88477828 88479224 + MGP_129S1SvImJ_P0061580 Glmp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061581.1 MGP_129S1SvImJ_G0027389.1 mouse_genomes_project 3 88477838 88481091 + MGP_129S1SvImJ_P0061581 Glmp protein_coding protein_coding MGP_129S1SvImJ_T0061582.1 MGP_129S1SvImJ_G0027389.1 mouse_genomes_project 3 88477838 88481086 + MGP_129S1SvImJ_P0061582 Glmp protein_coding protein_coding MGP_129S1SvImJ_T0061583.1 MGP_129S1SvImJ_G0027389.1 mouse_genomes_project 3 88477838 88481091 + MGP_129S1SvImJ_P0061583 Glmp protein_coding protein_coding MGP_129S1SvImJ_T0061584.1 MGP_129S1SvImJ_G0027389.1 mouse_genomes_project 3 88478800 88481041 + Glmp protein_coding retained_intron MGP_129S1SvImJ_T0061585.1 MGP_129S1SvImJ_G0027389.1 mouse_genomes_project 3 88480795 88481304 + MGP_129S1SvImJ_P0061585 Glmp protein_coding protein_coding MGP_129S1SvImJ_T0099774.1 MGP_129S1SvImJ_G0037841.1 mouse_genomes_project 3 98057366 98057476 - Gm24435 snRNA snRNA MGP_129S1SvImJ_T0014219.1 MGP_129S1SvImJ_G0012308.1 mouse_genomes_project 3 100245899 100246428 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063903.1 MGP_129S1SvImJ_G0027906.1 mouse_genomes_project 3 138282869 138299630 - MGP_129S1SvImJ_P0063903 Cisd2 protein_coding protein_coding MGP_129S1SvImJ_T0063904.1 MGP_129S1SvImJ_G0027906.1 mouse_genomes_project 3 138286490 138299112 - MGP_129S1SvImJ_P0063904 Cisd2 protein_coding protein_coding MGP_129S1SvImJ_T0063905.1 MGP_129S1SvImJ_G0027906.1 mouse_genomes_project 3 138295654 138299109 - Cisd2 protein_coding retained_intron MGP_129S1SvImJ_T0063906.1 MGP_129S1SvImJ_G0027906.1 mouse_genomes_project 3 138296560 138298784 - Cisd2 protein_coding processed_transcript MGP_129S1SvImJ_T0014041.1 MGP_129S1SvImJ_G0012130.1 mouse_genomes_project 3 46335644 46336328 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007558.1 MGP_129S1SvImJ_G0006191.1 mouse_genomes_project 3 52558237 52578814 + Gm31026 lincRNA lincRNA MGP_129S1SvImJ_T0014327.1 MGP_129S1SvImJ_G0012416.1 mouse_genomes_project 3 134161465 134161660 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017997.1 MGP_129S1SvImJ_G0015508.1 mouse_genomes_project 3 88348935 88351794 + AW047730 processed_transcript processed_transcript MGP_129S1SvImJ_T0017998.1 MGP_129S1SvImJ_G0015508.1 mouse_genomes_project 3 88348947 88351794 + AW047730 processed_transcript processed_transcript MGP_129S1SvImJ_T0062377.1 MGP_129S1SvImJ_G0027578.1 mouse_genomes_project 3 95948807 95963298 - MGP_129S1SvImJ_P0062377 Bnipl protein_coding protein_coding MGP_129S1SvImJ_T0062378.1 MGP_129S1SvImJ_G0027578.1 mouse_genomes_project 3 95948831 95963154 - MGP_129S1SvImJ_P0062378 Bnipl protein_coding protein_coding MGP_129S1SvImJ_T0062379.1 MGP_129S1SvImJ_G0027578.1 mouse_genomes_project 3 95949361 95963241 - MGP_129S1SvImJ_P0062379 Bnipl protein_coding protein_coding MGP_129S1SvImJ_T0062380.1 MGP_129S1SvImJ_G0027578.1 mouse_genomes_project 3 95951791 95963253 - MGP_129S1SvImJ_P0062380 Bnipl protein_coding protein_coding MGP_129S1SvImJ_T0062381.1 MGP_129S1SvImJ_G0027578.1 mouse_genomes_project 3 95953946 95960684 - Bnipl protein_coding retained_intron MGP_129S1SvImJ_T0007575.1 MGP_129S1SvImJ_G0006203.1 mouse_genomes_project 3 67970253 67973648 - lincRNA lincRNA MGP_129S1SvImJ_T0060362.1 MGP_129S1SvImJ_G0027131.1 mouse_genomes_project 3 28616117 28645085 + MGP_129S1SvImJ_P0060362 Skil protein_coding protein_coding MGP_129S1SvImJ_T0060363.1 MGP_129S1SvImJ_G0027131.1 mouse_genomes_project 3 28616120 28622460 + Skil protein_coding retained_intron MGP_129S1SvImJ_T0060364.1 MGP_129S1SvImJ_G0027131.1 mouse_genomes_project 3 28616120 28645089 + MGP_129S1SvImJ_P0060364 Skil protein_coding protein_coding MGP_129S1SvImJ_T0060365.1 MGP_129S1SvImJ_G0027131.1 mouse_genomes_project 3 28616124 28618958 + MGP_129S1SvImJ_P0060365 Skil protein_coding protein_coding MGP_129S1SvImJ_T0060366.1 MGP_129S1SvImJ_G0027131.1 mouse_genomes_project 3 28616184 28640334 + MGP_129S1SvImJ_P0060366 Skil protein_coding protein_coding MGP_129S1SvImJ_T0060367.1 MGP_129S1SvImJ_G0027131.1 mouse_genomes_project 3 28617898 28640045 + MGP_129S1SvImJ_P0060367 Skil protein_coding protein_coding MGP_129S1SvImJ_T0060368.1 MGP_129S1SvImJ_G0027131.1 mouse_genomes_project 3 28618396 28639667 + MGP_129S1SvImJ_P0060368 Skil protein_coding unknown_likely_coding MGP_129S1SvImJ_T0013980.1 MGP_129S1SvImJ_G0012069.1 mouse_genomes_project 3 22250416 22250699 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062182.1 MGP_129S1SvImJ_G0027543.1 mouse_genomes_project 3 94792168 94794835 - MGP_129S1SvImJ_P0062182 protein_coding protein_coding MGP_129S1SvImJ_T0098895.1 MGP_129S1SvImJ_G0036973.1 mouse_genomes_project 3 105054007 105055430 - Gm43149 sense_intronic sense_intronic MGP_129S1SvImJ_T0017963.1 MGP_129S1SvImJ_G0015499.1 mouse_genomes_project 3 31750991 31753687 + processed_transcript retained_intron MGP_129S1SvImJ_T0017964.1 MGP_129S1SvImJ_G0015499.1 mouse_genomes_project 3 31751159 32318495 + processed_transcript sense_overlapping MGP_129S1SvImJ_T0017965.1 MGP_129S1SvImJ_G0015499.1 mouse_genomes_project 3 31751179 32356132 + processed_transcript sense_overlapping MGP_129S1SvImJ_T0017966.1 MGP_129S1SvImJ_G0015499.1 mouse_genomes_project 3 31848823 32318570 + processed_transcript sense_overlapping MGP_129S1SvImJ_T0017967.1 MGP_129S1SvImJ_G0015499.1 mouse_genomes_project 3 31848936 32188403 + processed_transcript sense_overlapping MGP_129S1SvImJ_T0017968.1 MGP_129S1SvImJ_G0015499.1 mouse_genomes_project 3 32238434 32355956 + processed_transcript sense_overlapping MGP_129S1SvImJ_T0017969.1 MGP_129S1SvImJ_G0015499.1 mouse_genomes_project 3 32238487 32358095 + processed_transcript sense_overlapping MGP_129S1SvImJ_T0017970.1 MGP_129S1SvImJ_G0015499.1 mouse_genomes_project 3 32238494 32252597 + processed_transcript sense_overlapping MGP_129S1SvImJ_T0017971.1 MGP_129S1SvImJ_G0015499.1 mouse_genomes_project 3 32238498 32318533 + processed_transcript sense_overlapping MGP_129S1SvImJ_T0017972.1 MGP_129S1SvImJ_G0015499.1 mouse_genomes_project 3 32238822 32238889 + processed_transcript misc_RNA MGP_129S1SvImJ_T0017973.1 MGP_129S1SvImJ_G0015499.1 mouse_genomes_project 3 32267929 32356096 + processed_transcript sense_overlapping MGP_129S1SvImJ_T0017974.1 MGP_129S1SvImJ_G0015499.1 mouse_genomes_project 3 32317255 32358095 + processed_transcript sense_overlapping MGP_129S1SvImJ_T0017975.1 MGP_129S1SvImJ_G0015499.1 mouse_genomes_project 3 32318260 32355999 + processed_transcript sense_overlapping MGP_129S1SvImJ_T0017976.1 MGP_129S1SvImJ_G0015499.1 mouse_genomes_project 3 32318338 32360953 + processed_transcript sense_overlapping MGP_129S1SvImJ_T0017977.1 MGP_129S1SvImJ_G0015499.1 mouse_genomes_project 3 32318383 32360916 + processed_transcript sense_overlapping MGP_129S1SvImJ_T0017978.1 MGP_129S1SvImJ_G0015499.1 mouse_genomes_project 3 32318590 32364628 + processed_transcript sense_overlapping MGP_129S1SvImJ_T0017979.1 MGP_129S1SvImJ_G0015499.1 mouse_genomes_project 3 32336129 32356248 + processed_transcript sense_overlapping MGP_129S1SvImJ_T0017980.1 MGP_129S1SvImJ_G0015499.1 mouse_genomes_project 3 32345338 32358097 + processed_transcript sense_overlapping MGP_129S1SvImJ_T0063321.1 MGP_129S1SvImJ_G0027797.1 mouse_genomes_project 3 114910919 114914326 - MGP_129S1SvImJ_P0063321 protein_coding protein_coding MGP_129S1SvImJ_T0101686.1 MGP_129S1SvImJ_G0039703.1 mouse_genomes_project 3 64620611 64641398 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101687.1 MGP_129S1SvImJ_G0039703.1 mouse_genomes_project 3 64622045 64622519 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101688.1 MGP_129S1SvImJ_G0039703.1 mouse_genomes_project 3 64628657 64646231 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101689.1 MGP_129S1SvImJ_G0039703.1 mouse_genomes_project 3 64640705 64646073 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101690.1 MGP_129S1SvImJ_G0039703.1 mouse_genomes_project 3 64640738 64646239 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0063412.1 MGP_129S1SvImJ_G0027817.1 mouse_genomes_project 3 118582487 118645249 - MGP_129S1SvImJ_P0063412 Slc35a3 protein_coding protein_coding MGP_129S1SvImJ_T0063413.1 MGP_129S1SvImJ_G0027817.1 mouse_genomes_project 3 118585765 118636839 - MGP_129S1SvImJ_P0063413 Slc35a3 protein_coding protein_coding MGP_129S1SvImJ_T0063414.1 MGP_129S1SvImJ_G0027817.1 mouse_genomes_project 3 118588257 118591036 - Slc35a3 protein_coding processed_transcript MGP_129S1SvImJ_T0063415.1 MGP_129S1SvImJ_G0027817.1 mouse_genomes_project 3 118595688 118636450 - MGP_129S1SvImJ_P0063415 Slc35a3 protein_coding protein_coding MGP_129S1SvImJ_T0063416.1 MGP_129S1SvImJ_G0027817.1 mouse_genomes_project 3 118595823 118636820 - MGP_129S1SvImJ_P0063416 Slc35a3 protein_coding protein_coding MGP_129S1SvImJ_T0063417.1 MGP_129S1SvImJ_G0027817.1 mouse_genomes_project 3 118613892 118636865 - Slc35a3 protein_coding retained_intron MGP_129S1SvImJ_T0063418.1 MGP_129S1SvImJ_G0027817.1 mouse_genomes_project 3 118617535 118637439 - MGP_129S1SvImJ_P0063418 Slc35a3 protein_coding protein_coding MGP_129S1SvImJ_T0007505.1 MGP_129S1SvImJ_G0006154.1 mouse_genomes_project 3 32383081 32400616 - Gm3143 lincRNA lincRNA MGP_129S1SvImJ_T0007506.1 MGP_129S1SvImJ_G0006154.1 mouse_genomes_project 3 32393584 32400618 - Gm3143 lincRNA lincRNA MGP_129S1SvImJ_T0098913.1 MGP_129S1SvImJ_G0036991.1 mouse_genomes_project 3 105955217 105958950 + sense_intronic sense_intronic MGP_129S1SvImJ_T0014075.1 MGP_129S1SvImJ_G0012164.1 mouse_genomes_project 3 57138444 57138816 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098579.1 MGP_129S1SvImJ_G0036664.1 mouse_genomes_project 3 37570059 37570178 - n-R5s195 rRNA rRNA MGP_129S1SvImJ_T0009474.1 MGP_129S1SvImJ_G0007590.1 mouse_genomes_project 3 148367980 148378328 + Gm43742 macro_lncRNA macro_lncRNA MGP_129S1SvImJ_T0007720.1 MGP_129S1SvImJ_G0006316.1 mouse_genomes_project 3 136647102 136649704 - Gm30484 lincRNA lincRNA MGP_129S1SvImJ_T0001304.1 MGP_129S1SvImJ_G0001228.1 mouse_genomes_project 3 109828829 109834058 + TEC TEC MGP_129S1SvImJ_T0061361.1 MGP_129S1SvImJ_G0027340.1 mouse_genomes_project 3 84059593 84209508 - MGP_129S1SvImJ_P0061361 Trim2 protein_coding protein_coding MGP_129S1SvImJ_T0061362.1 MGP_129S1SvImJ_G0027340.1 mouse_genomes_project 3 84059594 84163573 - MGP_129S1SvImJ_P0061362 Trim2 protein_coding protein_coding MGP_129S1SvImJ_T0061363.1 MGP_129S1SvImJ_G0027340.1 mouse_genomes_project 3 84059595 84122295 - MGP_129S1SvImJ_P0061363 Trim2 protein_coding protein_coding MGP_129S1SvImJ_T0061364.1 MGP_129S1SvImJ_G0027340.1 mouse_genomes_project 3 84061028 84122283 - MGP_129S1SvImJ_P0061364 Trim2 protein_coding protein_coding MGP_129S1SvImJ_T0061365.1 MGP_129S1SvImJ_G0027340.1 mouse_genomes_project 3 84062494 84114257 - MGP_129S1SvImJ_P0061365 Trim2 protein_coding protein_coding MGP_129S1SvImJ_T0061366.1 MGP_129S1SvImJ_G0027340.1 mouse_genomes_project 3 84062860 84122251 - Trim2 protein_coding retained_intron MGP_129S1SvImJ_T0061367.1 MGP_129S1SvImJ_G0027340.1 mouse_genomes_project 3 84062875 84174604 - MGP_129S1SvImJ_P0061367 Trim2 protein_coding protein_coding MGP_129S1SvImJ_T0061369.1 MGP_129S1SvImJ_G0027340.1 mouse_genomes_project 3 84076411 84091011 - Trim2 protein_coding retained_intron MGP_129S1SvImJ_T0061370.1 MGP_129S1SvImJ_G0027340.1 mouse_genomes_project 3 84088782 84122280 - Trim2 protein_coding retained_intron MGP_129S1SvImJ_T0061371.1 MGP_129S1SvImJ_G0027340.1 mouse_genomes_project 3 84091149 84092036 - Trim2 protein_coding processed_transcript MGP_129S1SvImJ_T0061372.1 MGP_129S1SvImJ_G0027340.1 mouse_genomes_project 3 84092690 84210096 - MGP_129S1SvImJ_P0061372 Trim2 protein_coding protein_coding MGP_129S1SvImJ_T0061373.1 MGP_129S1SvImJ_G0027340.1 mouse_genomes_project 3 84092701 84210145 - MGP_129S1SvImJ_P0061373 Trim2 protein_coding protein_coding MGP_129S1SvImJ_T0061374.1 MGP_129S1SvImJ_G0027340.1 mouse_genomes_project 3 84093849 84163130 - MGP_129S1SvImJ_P0061374 Trim2 protein_coding protein_coding MGP_129S1SvImJ_T0061375.1 MGP_129S1SvImJ_G0027340.1 mouse_genomes_project 3 84107888 84122267 - Trim2 protein_coding retained_intron MGP_129S1SvImJ_T0061376.1 MGP_129S1SvImJ_G0027340.1 mouse_genomes_project 3 84109197 84122280 - Trim2 protein_coding retained_intron MGP_129S1SvImJ_T0061377.1 MGP_129S1SvImJ_G0027340.1 mouse_genomes_project 3 84109799 84122280 - MGP_129S1SvImJ_P0061377 Trim2 protein_coding protein_coding MGP_129S1SvImJ_T0061378.1 MGP_129S1SvImJ_G0027340.1 mouse_genomes_project 3 84161444 84163130 - Trim2 protein_coding processed_transcript MGP_129S1SvImJ_T0061379.1 MGP_129S1SvImJ_G0027340.1 mouse_genomes_project 3 84204662 84209440 - Trim2 protein_coding processed_transcript MGP_129S1SvImJ_T0061380.1 MGP_129S1SvImJ_G0027340.1 mouse_genomes_project 3 84209544 84211576 - Trim2 protein_coding processed_transcript MGP_129S1SvImJ_T0098899.1 MGP_129S1SvImJ_G0036977.1 mouse_genomes_project 3 105360586 105361727 - Gm42696 sense_intronic sense_intronic MGP_129S1SvImJ_T0014164.1 MGP_129S1SvImJ_G0012253.1 mouse_genomes_project 3 86179132 86179565 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007693.1 MGP_129S1SvImJ_G0006293.1 mouse_genomes_project 3 124552792 124562916 + Gm40190 lincRNA lincRNA MGP_129S1SvImJ_T0007545.1 MGP_129S1SvImJ_G0006180.1 mouse_genomes_project 3 49506521 49523604 - Gm29230 lincRNA lincRNA MGP_129S1SvImJ_T0007602.1 MGP_129S1SvImJ_G0006225.1 mouse_genomes_project 3 83241488 83243862 + Gm38096 lincRNA lincRNA MGP_129S1SvImJ_T0102475.1 MGP_129S1SvImJ_G0040309.1 mouse_genomes_project 3 91191907 91193790 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0004258.1 MGP_129S1SvImJ_G0003750.1 mouse_genomes_project 3 53781733 53811492 + 4931419H13Rik antisense antisense MGP_129S1SvImJ_T0014008.1 MGP_129S1SvImJ_G0012097.1 mouse_genomes_project 3 34642619 34643226 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001212.1 MGP_129S1SvImJ_G0001138.1 mouse_genomes_project 3 50155067 50156168 + TEC TEC MGP_129S1SvImJ_T0014280.1 MGP_129S1SvImJ_G0012369.1 mouse_genomes_project 3 117008264 117008685 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013974.1 MGP_129S1SvImJ_G0012063.1 mouse_genomes_project 3 18356248 18356669 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007658.1 MGP_129S1SvImJ_G0006267.1 mouse_genomes_project 3 105972548 105976669 - Gm29561 lincRNA lincRNA MGP_129S1SvImJ_T0060956.1 MGP_129S1SvImJ_G0027240.1 mouse_genomes_project 3 57709357 57744527 - MGP_129S1SvImJ_P0060956 Clrn1 protein_coding protein_coding MGP_129S1SvImJ_T0060957.1 MGP_129S1SvImJ_G0027240.1 mouse_genomes_project 3 57710544 57744527 - MGP_129S1SvImJ_P0060957 Clrn1 protein_coding protein_coding MGP_129S1SvImJ_T0060958.1 MGP_129S1SvImJ_G0027240.1 mouse_genomes_project 3 57711310 57744655 - MGP_129S1SvImJ_P0060958 Clrn1 protein_coding protein_coding MGP_129S1SvImJ_T0060959.1 MGP_129S1SvImJ_G0027240.1 mouse_genomes_project 3 57711692 57725208 - Clrn1 protein_coding retained_intron MGP_129S1SvImJ_T0098584.1 MGP_129S1SvImJ_G0036669.1 mouse_genomes_project 3 130247781 130247867 + Gm23279 rRNA rRNA MGP_129S1SvImJ_T0001152.1 MGP_129S1SvImJ_G0001078.1 mouse_genomes_project 3 27993198 27995351 - TEC TEC MGP_129S1SvImJ_T0060687.1 MGP_129S1SvImJ_G0027187.1 mouse_genomes_project 3 39646183 39771227 - MGP_129S1SvImJ_P0060687 Sclt1 protein_coding protein_coding MGP_129S1SvImJ_T0060688.1 MGP_129S1SvImJ_G0027187.1 mouse_genomes_project 3 39646439 39771194 - MGP_129S1SvImJ_P0060688 Sclt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060689.1 MGP_129S1SvImJ_G0027187.1 mouse_genomes_project 3 39646439 39770741 - MGP_129S1SvImJ_P0060689 Sclt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060690.1 MGP_129S1SvImJ_G0027187.1 mouse_genomes_project 3 39646603 39649543 - Sclt1 protein_coding retained_intron MGP_129S1SvImJ_T0060691.1 MGP_129S1SvImJ_G0027187.1 mouse_genomes_project 3 39648819 39694820 - Sclt1 protein_coding retained_intron MGP_129S1SvImJ_T0060692.1 MGP_129S1SvImJ_G0027187.1 mouse_genomes_project 3 39678442 39685214 - MGP_129S1SvImJ_P0060692 Sclt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060693.1 MGP_129S1SvImJ_G0027187.1 mouse_genomes_project 3 39695328 39740782 - Sclt1 protein_coding retained_intron MGP_129S1SvImJ_T0060694.1 MGP_129S1SvImJ_G0027187.1 mouse_genomes_project 3 39770231 39771118 - Sclt1 protein_coding retained_intron MGP_129S1SvImJ_T0063987.1 MGP_129S1SvImJ_G0027921.1 mouse_genomes_project 3 140961186 141018485 - MGP_129S1SvImJ_P0063987 Dapp1 protein_coding protein_coding MGP_129S1SvImJ_T0063988.1 MGP_129S1SvImJ_G0027921.1 mouse_genomes_project 3 140961187 141018476 - MGP_129S1SvImJ_P0063988 Dapp1 protein_coding protein_coding MGP_129S1SvImJ_T0063989.1 MGP_129S1SvImJ_G0027921.1 mouse_genomes_project 3 140962880 140987413 - Dapp1 protein_coding processed_transcript MGP_129S1SvImJ_T0063990.1 MGP_129S1SvImJ_G0027921.1 mouse_genomes_project 3 140963183 140986259 - Dapp1 protein_coding processed_transcript MGP_129S1SvImJ_T0063991.1 MGP_129S1SvImJ_G0027921.1 mouse_genomes_project 3 140963294 141018470 - Dapp1 protein_coding processed_transcript MGP_129S1SvImJ_T0063992.1 MGP_129S1SvImJ_G0027921.1 mouse_genomes_project 3 140981271 140986259 - Dapp1 protein_coding processed_transcript MGP_129S1SvImJ_T0063993.1 MGP_129S1SvImJ_G0027921.1 mouse_genomes_project 3 141017644 141018476 - Dapp1 protein_coding retained_intron MGP_129S1SvImJ_T0099804.1 MGP_129S1SvImJ_G0037871.1 mouse_genomes_project 3 161500610 161500717 + Gm22458 snRNA snRNA MGP_129S1SvImJ_T0001172.1 MGP_129S1SvImJ_G0001098.1 mouse_genomes_project 3 35077938 35078414 + TEC TEC MGP_129S1SvImJ_T0014048.1 MGP_129S1SvImJ_G0012137.1 mouse_genomes_project 3 48497530 48497852 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061642.1 MGP_129S1SvImJ_G0027401.1 mouse_genomes_project 3 88719225 88720501 - Lamtor2 protein_coding retained_intron MGP_129S1SvImJ_T0061643.1 MGP_129S1SvImJ_G0027401.1 mouse_genomes_project 3 88719225 88722431 - MGP_129S1SvImJ_P0061643 Lamtor2 protein_coding protein_coding MGP_129S1SvImJ_T0061644.1 MGP_129S1SvImJ_G0027401.1 mouse_genomes_project 3 88719226 88722266 - MGP_129S1SvImJ_P0061644 Lamtor2 protein_coding protein_coding MGP_129S1SvImJ_T0061645.1 MGP_129S1SvImJ_G0027401.1 mouse_genomes_project 3 88719227 88722300 - Lamtor2 protein_coding processed_transcript MGP_129S1SvImJ_T0061646.1 MGP_129S1SvImJ_G0027401.1 mouse_genomes_project 3 88721636 88722481 - Lamtor2 protein_coding retained_intron MGP_129S1SvImJ_T0001397.1 MGP_129S1SvImJ_G0001320.1 mouse_genomes_project 3 156006792 156007907 + TEC TEC MGP_129S1SvImJ_T0010542.1 MGP_129S1SvImJ_G0008658.1 mouse_genomes_project 3 89428344 89428427 - Mir92b miRNA miRNA MGP_129S1SvImJ_T0013986.1 MGP_129S1SvImJ_G0012075.1 mouse_genomes_project 3 24626172 24626441 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062200.1 MGP_129S1SvImJ_G0027550.1 mouse_genomes_project 3 95005755 95008015 - protein_coding retained_intron MGP_129S1SvImJ_T0062201.1 MGP_129S1SvImJ_G0027550.1 mouse_genomes_project 3 95006512 95009963 - MGP_129S1SvImJ_P0062201 protein_coding protein_coding MGP_129S1SvImJ_T0062202.1 MGP_129S1SvImJ_G0027550.1 mouse_genomes_project 3 95006733 95017161 - MGP_129S1SvImJ_P0062202 protein_coding protein_coding MGP_129S1SvImJ_T0062203.1 MGP_129S1SvImJ_G0027550.1 mouse_genomes_project 3 95006733 95017079 - MGP_129S1SvImJ_P0062203 protein_coding protein_coding MGP_129S1SvImJ_T0062204.1 MGP_129S1SvImJ_G0027550.1 mouse_genomes_project 3 95006733 95008464 - MGP_129S1SvImJ_P0062204 protein_coding protein_coding MGP_129S1SvImJ_T0062205.1 MGP_129S1SvImJ_G0027550.1 mouse_genomes_project 3 95006733 95009914 - MGP_129S1SvImJ_P0062205 protein_coding protein_coding MGP_129S1SvImJ_T0062206.1 MGP_129S1SvImJ_G0027550.1 mouse_genomes_project 3 95006733 95009984 - MGP_129S1SvImJ_P0062206 protein_coding protein_coding MGP_129S1SvImJ_T0062207.1 MGP_129S1SvImJ_G0027550.1 mouse_genomes_project 3 95008462 95010110 - protein_coding retained_intron MGP_129S1SvImJ_T0099791.1 MGP_129S1SvImJ_G0037858.1 mouse_genomes_project 3 135309491 135309597 - Gm25307 snRNA snRNA MGP_129S1SvImJ_T0007769.1 MGP_129S1SvImJ_G0006359.1 mouse_genomes_project 3 151180640 151198499 - Gm36888 lincRNA lincRNA MGP_129S1SvImJ_T0060293.1 MGP_129S1SvImJ_G0027119.1 mouse_genomes_project 3 26505004 26571713 + MGP_129S1SvImJ_P0060293 Egfem1 protein_coding protein_coding MGP_129S1SvImJ_T0060294.1 MGP_129S1SvImJ_G0027119.1 mouse_genomes_project 3 26505281 27030118 + MGP_129S1SvImJ_P0060294 Egfem1 protein_coding protein_coding MGP_129S1SvImJ_T0060295.1 MGP_129S1SvImJ_G0027119.1 mouse_genomes_project 3 26507015 27124693 + Egfem1 protein_coding retained_intron MGP_129S1SvImJ_T0060296.1 MGP_129S1SvImJ_G0027119.1 mouse_genomes_project 3 26507171 27142073 + MGP_129S1SvImJ_P0060296 Egfem1 protein_coding protein_coding MGP_129S1SvImJ_T0060297.1 MGP_129S1SvImJ_G0027119.1 mouse_genomes_project 3 26507209 27141374 + MGP_129S1SvImJ_P0060297 Egfem1 protein_coding protein_coding MGP_129S1SvImJ_T0060298.1 MGP_129S1SvImJ_G0027119.1 mouse_genomes_project 3 26892417 27099897 + Egfem1 protein_coding processed_transcript MGP_129S1SvImJ_T0060299.1 MGP_129S1SvImJ_G0027119.1 mouse_genomes_project 3 26954441 27123800 + MGP_129S1SvImJ_P0060299 Egfem1 protein_coding protein_coding MGP_129S1SvImJ_T0014053.1 MGP_129S1SvImJ_G0012142.1 mouse_genomes_project 3 49872703 49873022 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014133.1 MGP_129S1SvImJ_G0012222.1 mouse_genomes_project 3 71990242 71990756 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061453.1 MGP_129S1SvImJ_G0027363.1 mouse_genomes_project 3 87529425 87562909 + MGP_129S1SvImJ_P0061453 Fcrl5 protein_coding protein_coding MGP_129S1SvImJ_T0061454.1 MGP_129S1SvImJ_G0027363.1 mouse_genomes_project 3 87529465 87598752 + MGP_129S1SvImJ_P0061454 Fcrl5 protein_coding protein_coding MGP_129S1SvImJ_T0061455.1 MGP_129S1SvImJ_G0027363.1 mouse_genomes_project 3 87529537 87553512 + MGP_129S1SvImJ_P0061455 Fcrl5 protein_coding protein_coding MGP_129S1SvImJ_T0061456.1 MGP_129S1SvImJ_G0027363.1 mouse_genomes_project 3 87529537 87553512 + MGP_129S1SvImJ_P0061456 Fcrl5 protein_coding protein_coding MGP_129S1SvImJ_T0061457.1 MGP_129S1SvImJ_G0027363.1 mouse_genomes_project 3 87529537 87553512 + MGP_129S1SvImJ_P0061457 Fcrl5 protein_coding protein_coding MGP_129S1SvImJ_T0062174.1 MGP_129S1SvImJ_G0027537.1 mouse_genomes_project 3 94058697 94068277 + MGP_129S1SvImJ_P0062174 S100a10 protein_coding protein_coding MGP_129S1SvImJ_T0062175.1 MGP_129S1SvImJ_G0027537.1 mouse_genomes_project 3 94058780 94065150 + S100a10 protein_coding retained_intron MGP_129S1SvImJ_T0062176.1 MGP_129S1SvImJ_G0027537.1 mouse_genomes_project 3 94064371 94068084 + MGP_129S1SvImJ_P0062176 S100a10 protein_coding protein_coding MGP_129S1SvImJ_T0064244.1 MGP_129S1SvImJ_G0027977.1 mouse_genomes_project 3 150174227 150180357 - MGP_129S1SvImJ_P0064244 4930503B20Rik protein_coding protein_coding MGP_129S1SvImJ_T0064249.1 MGP_129S1SvImJ_G0027977.1 mouse_genomes_project 3 150175312 150177346 - 4930503B20Rik protein_coding processed_transcript MGP_129S1SvImJ_T0064250.1 MGP_129S1SvImJ_G0027977.1 mouse_genomes_project 3 150178605 150180355 - MGP_129S1SvImJ_P0064250 4930503B20Rik protein_coding protein_coding MGP_129S1SvImJ_T0014106.1 MGP_129S1SvImJ_G0012195.1 mouse_genomes_project 3 65269196 65269952 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062241.1 MGP_129S1SvImJ_G0027557.1 mouse_genomes_project 3 95291838 95446836 - MGP_129S1SvImJ_P0062241 Cgn protein_coding protein_coding MGP_129S1SvImJ_T0062242.1 MGP_129S1SvImJ_G0027557.1 mouse_genomes_project 3 95291838 95446865 - MGP_129S1SvImJ_P0062242 Cgn protein_coding protein_coding MGP_129S1SvImJ_T0062254.1 MGP_129S1SvImJ_G0027557.1 mouse_genomes_project 3 95435635 95446840 - MGP_129S1SvImJ_P0062254 Cgn protein_coding protein_coding MGP_129S1SvImJ_T0062255.1 MGP_129S1SvImJ_G0027557.1 mouse_genomes_project 3 95435635 95446824 - MGP_129S1SvImJ_P0062255 Cgn protein_coding protein_coding MGP_129S1SvImJ_T0014353.1 MGP_129S1SvImJ_G0012442.1 mouse_genomes_project 3 141642568 141643300 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013933.1 MGP_129S1SvImJ_G0012022.1 mouse_genomes_project 3 7289884 7290063 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062585.1 MGP_129S1SvImJ_G0027625.1 mouse_genomes_project 3 97522157 97532146 + Pex11b protein_coding processed_transcript MGP_129S1SvImJ_T0062586.1 MGP_129S1SvImJ_G0027625.1 mouse_genomes_project 3 97522211 97532146 + MGP_129S1SvImJ_P0062586 Pex11b protein_coding protein_coding MGP_129S1SvImJ_T0062588.1 MGP_129S1SvImJ_G0027625.1 mouse_genomes_project 3 97522281 97530813 + MGP_129S1SvImJ_P0062588 Pex11b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062589.1 MGP_129S1SvImJ_G0027625.1 mouse_genomes_project 3 97522434 97523735 + Pex11b protein_coding retained_intron MGP_129S1SvImJ_T0062590.1 MGP_129S1SvImJ_G0027625.1 mouse_genomes_project 3 97522453 97531506 + MGP_129S1SvImJ_P0062590 Pex11b protein_coding protein_coding MGP_129S1SvImJ_T0062591.1 MGP_129S1SvImJ_G0027625.1 mouse_genomes_project 3 97522614 97531506 + MGP_129S1SvImJ_P0062591 Pex11b protein_coding protein_coding MGP_129S1SvImJ_T0062592.1 MGP_129S1SvImJ_G0027625.1 mouse_genomes_project 3 97523834 97530580 + Pex11b protein_coding retained_intron MGP_129S1SvImJ_T0063045.1 MGP_129S1SvImJ_G0027732.1 mouse_genomes_project 3 107854593 107873383 - MGP_129S1SvImJ_P0063045 Chil6 protein_coding protein_coding MGP_129S1SvImJ_T0001275.1 MGP_129S1SvImJ_G0001199.1 mouse_genomes_project 3 85908079 85909620 + TEC TEC MGP_129S1SvImJ_T0102465.1 MGP_129S1SvImJ_G0040299.1 mouse_genomes_project 3 79923091 79923242 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0063918.1 MGP_129S1SvImJ_G0027908.1 mouse_genomes_project 3 138373453 138478459 + MGP_129S1SvImJ_P0063918 Manba protein_coding protein_coding MGP_129S1SvImJ_T0063919.1 MGP_129S1SvImJ_G0027908.1 mouse_genomes_project 3 138373453 138459657 + MGP_129S1SvImJ_P0063919 Manba protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063920.1 MGP_129S1SvImJ_G0027908.1 mouse_genomes_project 3 138373461 138459616 + Manba protein_coding retained_intron MGP_129S1SvImJ_T0063921.1 MGP_129S1SvImJ_G0027908.1 mouse_genomes_project 3 138373467 138406828 + Manba protein_coding retained_intron MGP_129S1SvImJ_T0063922.1 MGP_129S1SvImJ_G0027908.1 mouse_genomes_project 3 138411157 138445609 + Manba protein_coding processed_transcript MGP_129S1SvImJ_T0063923.1 MGP_129S1SvImJ_G0027908.1 mouse_genomes_project 3 138421275 138422900 + Manba protein_coding processed_transcript MGP_129S1SvImJ_T0063924.1 MGP_129S1SvImJ_G0027908.1 mouse_genomes_project 3 138447934 138454737 + Manba protein_coding retained_intron MGP_129S1SvImJ_T0063925.1 MGP_129S1SvImJ_G0027908.1 mouse_genomes_project 3 138451934 138458858 + Manba protein_coding processed_transcript MGP_129S1SvImJ_T0063926.1 MGP_129S1SvImJ_G0027908.1 mouse_genomes_project 3 138454145 138460853 + Manba protein_coding processed_transcript MGP_129S1SvImJ_T0063927.1 MGP_129S1SvImJ_G0027908.1 mouse_genomes_project 3 138454216 138468891 + Manba protein_coding processed_transcript MGP_129S1SvImJ_T0063928.1 MGP_129S1SvImJ_G0027908.1 mouse_genomes_project 3 138468851 138474608 + Manba protein_coding processed_transcript MGP_129S1SvImJ_T0007705.1 MGP_129S1SvImJ_G0006303.1 mouse_genomes_project 3 131680101 131682841 - Gm28543 lincRNA lincRNA MGP_129S1SvImJ_T0060025.1 MGP_129S1SvImJ_G0027054.1 mouse_genomes_project 3 5657975 5780184 - MGP_129S1SvImJ_P0060025 Mrps28 protein_coding protein_coding MGP_129S1SvImJ_T0013930.1 MGP_129S1SvImJ_G0012019.1 mouse_genomes_project 3 6839150 6842098 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013966.1 MGP_129S1SvImJ_G0012055.1 mouse_genomes_project 3 16789289 16790037 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062562.1 MGP_129S1SvImJ_G0027616.1 mouse_genomes_project 3 97093777 97103983 - MGP_129S1SvImJ_P0062562 Fcgr1 protein_coding protein_coding MGP_129S1SvImJ_T0062563.1 MGP_129S1SvImJ_G0027616.1 mouse_genomes_project 3 97095399 97103504 - MGP_129S1SvImJ_P0062563 Fcgr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0007641.1 MGP_129S1SvImJ_G0006252.1 mouse_genomes_project 3 98903926 98945006 + Gm5544 lincRNA lincRNA MGP_129S1SvImJ_T0063033.1 MGP_129S1SvImJ_G0027727.1 mouse_genomes_project 3 107385938 107406216 - MGP_129S1SvImJ_P0063033 Pifo protein_coding protein_coding MGP_129S1SvImJ_T0063034.1 MGP_129S1SvImJ_G0027727.1 mouse_genomes_project 3 107385947 107390375 - MGP_129S1SvImJ_P0063034 Pifo protein_coding protein_coding MGP_129S1SvImJ_T0063287.1 MGP_129S1SvImJ_G0027790.1 mouse_genomes_project 3 110526446 110526839 - MGP_129S1SvImJ_P0063287 Gm9857 protein_coding protein_coding MGP_129S1SvImJ_T0101027.1 MGP_129S1SvImJ_G0039094.1 mouse_genomes_project 3 55829136 55829266 + Gm22269 snoRNA snoRNA MGP_129S1SvImJ_T0007626.1 MGP_129S1SvImJ_G0006237.1 mouse_genomes_project 3 92517579 92519860 + Gm43736 lincRNA lincRNA MGP_129S1SvImJ_T0007706.1 MGP_129S1SvImJ_G0006304.1 mouse_genomes_project 3 133481326 133482312 + Gm42997 lincRNA lincRNA MGP_129S1SvImJ_T0007707.1 MGP_129S1SvImJ_G0006304.1 mouse_genomes_project 3 133481467 133530398 + Gm42997 lincRNA lincRNA MGP_129S1SvImJ_T0014195.1 MGP_129S1SvImJ_G0012284.1 mouse_genomes_project 3 93996282 93998397 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063214.1 MGP_129S1SvImJ_G0027776.1 mouse_genomes_project 3 109940518 109965222 - MGP_129S1SvImJ_P0063214 Celsr2 protein_coding protein_coding MGP_129S1SvImJ_T0063215.1 MGP_129S1SvImJ_G0027776.1 mouse_genomes_project 3 109941889 109948619 - MGP_129S1SvImJ_P0063215 Celsr2 protein_coding protein_coding MGP_129S1SvImJ_T0063216.1 MGP_129S1SvImJ_G0027776.1 mouse_genomes_project 3 109942046 109943101 - Celsr2 protein_coding processed_transcript MGP_129S1SvImJ_T0063217.1 MGP_129S1SvImJ_G0027776.1 mouse_genomes_project 3 109942267 109943192 - Celsr2 protein_coding retained_intron MGP_129S1SvImJ_T0063218.1 MGP_129S1SvImJ_G0027776.1 mouse_genomes_project 3 109943202 109943970 - Celsr2 protein_coding retained_intron MGP_129S1SvImJ_T0063219.1 MGP_129S1SvImJ_G0027776.1 mouse_genomes_project 3 109945227 109946161 - Celsr2 protein_coding retained_intron MGP_129S1SvImJ_T0063220.1 MGP_129S1SvImJ_G0027776.1 mouse_genomes_project 3 109950927 109952257 - Celsr2 protein_coding retained_intron MGP_129S1SvImJ_T0064260.1 MGP_129S1SvImJ_G0027980.1 mouse_genomes_project 3 150391061 150479443 + Ttll7 protein_coding retained_intron MGP_129S1SvImJ_T0064261.1 MGP_129S1SvImJ_G0027980.1 mouse_genomes_project 3 150391061 150522465 + MGP_129S1SvImJ_P0064261 Ttll7 protein_coding protein_coding MGP_129S1SvImJ_T0064262.1 MGP_129S1SvImJ_G0027980.1 mouse_genomes_project 3 150391061 150523724 + MGP_129S1SvImJ_P0064262 Ttll7 protein_coding protein_coding MGP_129S1SvImJ_T0064263.1 MGP_129S1SvImJ_G0027980.1 mouse_genomes_project 3 150437774 150519466 + MGP_129S1SvImJ_P0064263 Ttll7 protein_coding protein_coding MGP_129S1SvImJ_T0064264.1 MGP_129S1SvImJ_G0027980.1 mouse_genomes_project 3 150440254 150442105 + MGP_129S1SvImJ_P0064264 Ttll7 protein_coding protein_coding MGP_129S1SvImJ_T0064265.1 MGP_129S1SvImJ_G0027980.1 mouse_genomes_project 3 150483065 150521635 + Ttll7 protein_coding retained_intron MGP_129S1SvImJ_T0007667.1 MGP_129S1SvImJ_G0006273.1 mouse_genomes_project 3 109329999 109343925 - Gm36211 lincRNA lincRNA MGP_129S1SvImJ_T0001324.1 MGP_129S1SvImJ_G0001248.1 mouse_genomes_project 3 123964103 123967880 - TEC TEC MGP_129S1SvImJ_T0013964.1 MGP_129S1SvImJ_G0012053.1 mouse_genomes_project 3 15935312 15935601 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060103.1 MGP_129S1SvImJ_G0027078.1 mouse_genomes_project 3 12003410 12005441 + Car3 protein_coding retained_intron MGP_129S1SvImJ_T0060104.1 MGP_129S1SvImJ_G0027078.1 mouse_genomes_project 3 12003436 12012414 + MGP_129S1SvImJ_P0060104 Car3 protein_coding protein_coding MGP_129S1SvImJ_T0060105.1 MGP_129S1SvImJ_G0027078.1 mouse_genomes_project 3 12009068 12011960 + Car3 protein_coding retained_intron MGP_129S1SvImJ_T0007762.1 MGP_129S1SvImJ_G0006353.1 mouse_genomes_project 3 149085008 149087175 + Gm17501 lincRNA lincRNA MGP_129S1SvImJ_T0007763.1 MGP_129S1SvImJ_G0006353.1 mouse_genomes_project 3 149086795 149123999 + Gm17501 lincRNA lincRNA MGP_129S1SvImJ_T0001270.1 MGP_129S1SvImJ_G0001194.1 mouse_genomes_project 3 79320713 79322002 - TEC TEC MGP_129S1SvImJ_T0061806.1 MGP_129S1SvImJ_G0027423.1 mouse_genomes_project 3 89415648 89428066 + MGP_129S1SvImJ_P0061806 Thbs3 protein_coding protein_coding MGP_129S1SvImJ_T0061807.1 MGP_129S1SvImJ_G0027423.1 mouse_genomes_project 3 89415673 89419404 + MGP_129S1SvImJ_P0061807 Thbs3 protein_coding protein_coding MGP_129S1SvImJ_T0061808.1 MGP_129S1SvImJ_G0027423.1 mouse_genomes_project 3 89415695 89428066 + Thbs3 protein_coding retained_intron MGP_129S1SvImJ_T0061809.1 MGP_129S1SvImJ_G0027423.1 mouse_genomes_project 3 89415701 89428033 + MGP_129S1SvImJ_P0061809 Thbs3 protein_coding protein_coding MGP_129S1SvImJ_T0061810.1 MGP_129S1SvImJ_G0027423.1 mouse_genomes_project 3 89418738 89420406 + Thbs3 protein_coding retained_intron MGP_129S1SvImJ_T0061811.1 MGP_129S1SvImJ_G0027423.1 mouse_genomes_project 3 89422380 89424405 + Thbs3 protein_coding processed_transcript MGP_129S1SvImJ_T0061813.1 MGP_129S1SvImJ_G0027423.1 mouse_genomes_project 3 89425368 89426786 + Thbs3 protein_coding retained_intron MGP_129S1SvImJ_T0061814.1 MGP_129S1SvImJ_G0027423.1 mouse_genomes_project 3 89425517 89427932 + MGP_129S1SvImJ_P0061814 Thbs3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061815.1 MGP_129S1SvImJ_G0027423.1 mouse_genomes_project 3 89425558 89426654 + Thbs3 protein_coding retained_intron MGP_129S1SvImJ_T0061816.1 MGP_129S1SvImJ_G0027423.1 mouse_genomes_project 3 89426405 89427792 + Thbs3 protein_coding retained_intron MGP_129S1SvImJ_T0061817.1 MGP_129S1SvImJ_G0027423.1 mouse_genomes_project 3 89427478 89428015 + Thbs3 protein_coding retained_intron MGP_129S1SvImJ_T0063676.1 MGP_129S1SvImJ_G0027861.1 mouse_genomes_project 3 130035440 130036515 - MGP_129S1SvImJ_P0063676 protein_coding protein_coding MGP_129S1SvImJ_T0001205.1 MGP_129S1SvImJ_G0001131.1 mouse_genomes_project 3 49739909 49741534 + TEC TEC MGP_129S1SvImJ_T0062121.1 MGP_129S1SvImJ_G0027494.1 mouse_genomes_project 3 92863729 92865044 + MGP_129S1SvImJ_P0062121 Sprr2j-ps protein_coding protein_coding MGP_129S1SvImJ_T0063442.1 MGP_129S1SvImJ_G0027824.1 mouse_genomes_project 3 119767352 119834703 - MGP_129S1SvImJ_P0063442 Snx7 protein_coding protein_coding MGP_129S1SvImJ_T0063443.1 MGP_129S1SvImJ_G0027824.1 mouse_genomes_project 3 119767478 119861576 - MGP_129S1SvImJ_P0063443 Snx7 protein_coding protein_coding MGP_129S1SvImJ_T0063444.1 MGP_129S1SvImJ_G0027824.1 mouse_genomes_project 3 119767478 119861660 - MGP_129S1SvImJ_P0063444 Snx7 protein_coding protein_coding MGP_129S1SvImJ_T0063445.1 MGP_129S1SvImJ_G0027824.1 mouse_genomes_project 3 119815120 119819318 - Snx7 protein_coding retained_intron MGP_129S1SvImJ_T0014367.1 MGP_129S1SvImJ_G0012456.1 mouse_genomes_project 3 145736013 145736649 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004385.1 MGP_129S1SvImJ_G0003834.1 mouse_genomes_project 3 130350174 130351917 + Gm43653 antisense antisense MGP_129S1SvImJ_T0004361.1 MGP_129S1SvImJ_G0003814.1 mouse_genomes_project 3 109618181 109620609 + Gm12500 antisense antisense MGP_129S1SvImJ_T0004362.1 MGP_129S1SvImJ_G0003814.1 mouse_genomes_project 3 109618573 109620607 + Gm12500 antisense antisense MGP_129S1SvImJ_T0062644.1 MGP_129S1SvImJ_G0027638.1 mouse_genomes_project 3 98076521 98094377 + MGP_129S1SvImJ_P0062644 Acp6 protein_coding protein_coding MGP_129S1SvImJ_T0062645.1 MGP_129S1SvImJ_G0027638.1 mouse_genomes_project 3 98076840 98078140 + Acp6 protein_coding retained_intron MGP_129S1SvImJ_T0062646.1 MGP_129S1SvImJ_G0027638.1 mouse_genomes_project 3 98076847 98086111 + Acp6 protein_coding retained_intron MGP_129S1SvImJ_T0062647.1 MGP_129S1SvImJ_G0027638.1 mouse_genomes_project 3 98076847 98084847 + Acp6 protein_coding retained_intron MGP_129S1SvImJ_T0062648.1 MGP_129S1SvImJ_G0027638.1 mouse_genomes_project 3 98085177 98086253 + Acp6 protein_coding retained_intron MGP_129S1SvImJ_T0062649.1 MGP_129S1SvImJ_G0027638.1 mouse_genomes_project 3 98085894 98091664 + Acp6 protein_coding retained_intron MGP_129S1SvImJ_T0062650.1 MGP_129S1SvImJ_G0027638.1 mouse_genomes_project 3 98088950 98091693 + Acp6 protein_coding retained_intron MGP_129S1SvImJ_T0062651.1 MGP_129S1SvImJ_G0027638.1 mouse_genomes_project 3 98090442 98094321 + Acp6 protein_coding retained_intron MGP_129S1SvImJ_T0062652.1 MGP_129S1SvImJ_G0027638.1 mouse_genomes_project 3 98091803 98095102 + Acp6 protein_coding retained_intron MGP_129S1SvImJ_T0060240.1 MGP_129S1SvImJ_G0027109.1 mouse_genomes_project 3 24492241 24555943 + MGP_129S1SvImJ_P0060240 Nceh1 protein_coding protein_coding MGP_129S1SvImJ_T0060241.1 MGP_129S1SvImJ_G0027109.1 mouse_genomes_project 3 24492280 24537287 + Nceh1 protein_coding retained_intron MGP_129S1SvImJ_T0060242.1 MGP_129S1SvImJ_G0027109.1 mouse_genomes_project 3 24492280 24598950 + MGP_129S1SvImJ_P0060242 Nceh1 protein_coding protein_coding MGP_129S1SvImJ_T0060243.1 MGP_129S1SvImJ_G0027109.1 mouse_genomes_project 3 24492280 24532535 + MGP_129S1SvImJ_P0060243 Nceh1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060244.1 MGP_129S1SvImJ_G0027109.1 mouse_genomes_project 3 24497717 24550569 + Nceh1 protein_coding processed_transcript MGP_129S1SvImJ_T0004418.1 MGP_129S1SvImJ_G0003857.1 mouse_genomes_project 3 152608552 152623444 + Gm43573 antisense antisense MGP_129S1SvImJ_T0010567.1 MGP_129S1SvImJ_G0008683.1 mouse_genomes_project 3 130035212 130035278 + Mir302d miRNA miRNA MGP_129S1SvImJ_T0001271.1 MGP_129S1SvImJ_G0001195.1 mouse_genomes_project 3 79867292 79869617 + TEC TEC MGP_129S1SvImJ_T0010564.1 MGP_129S1SvImJ_G0008680.1 mouse_genomes_project 3 130034812 130034886 + Mir302b miRNA miRNA MGP_129S1SvImJ_T0101684.1 MGP_129S1SvImJ_G0039702.1 mouse_genomes_project 3 54601004 54601968 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101685.1 MGP_129S1SvImJ_G0039702.1 mouse_genomes_project 3 54601163 54602300 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0014250.1 MGP_129S1SvImJ_G0012339.1 mouse_genomes_project 3 109281412 109282028 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102502.1 MGP_129S1SvImJ_G0040336.1 mouse_genomes_project 3 108022838 108023253 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0007671.1 MGP_129S1SvImJ_G0006277.1 mouse_genomes_project 3 109906619 109907317 + Gm12525 lincRNA lincRNA MGP_129S1SvImJ_T0060026.1 MGP_129S1SvImJ_G0027055.1 mouse_genomes_project 3 5781858 5864502 - MGP_129S1SvImJ_P0060026 Tpd52 protein_coding protein_coding MGP_129S1SvImJ_T0060027.1 MGP_129S1SvImJ_G0027055.1 mouse_genomes_project 3 5784891 5864257 - MGP_129S1SvImJ_P0060027 Tpd52 protein_coding protein_coding MGP_129S1SvImJ_T0060028.1 MGP_129S1SvImJ_G0027055.1 mouse_genomes_project 3 5785863 5822458 - MGP_129S1SvImJ_P0060028 Tpd52 protein_coding protein_coding MGP_129S1SvImJ_T0060029.1 MGP_129S1SvImJ_G0027055.1 mouse_genomes_project 3 5787053 5822460 - MGP_129S1SvImJ_P0060029 Tpd52 protein_coding protein_coding MGP_129S1SvImJ_T0060030.1 MGP_129S1SvImJ_G0027055.1 mouse_genomes_project 3 5787157 5854301 - MGP_129S1SvImJ_P0060030 Tpd52 protein_coding protein_coding MGP_129S1SvImJ_T0060031.1 MGP_129S1SvImJ_G0027055.1 mouse_genomes_project 3 5787290 5864202 - MGP_129S1SvImJ_P0060031 Tpd52 protein_coding protein_coding MGP_129S1SvImJ_T0060032.1 MGP_129S1SvImJ_G0027055.1 mouse_genomes_project 3 5787329 5864218 - MGP_129S1SvImJ_P0060032 Tpd52 protein_coding protein_coding MGP_129S1SvImJ_T0060033.1 MGP_129S1SvImJ_G0027055.1 mouse_genomes_project 3 5787437 5820688 - MGP_129S1SvImJ_P0060033 Tpd52 protein_coding protein_coding MGP_129S1SvImJ_T0060034.1 MGP_129S1SvImJ_G0027055.1 mouse_genomes_project 3 5787512 5864257 - MGP_129S1SvImJ_P0060034 Tpd52 protein_coding protein_coding MGP_129S1SvImJ_T0060035.1 MGP_129S1SvImJ_G0027055.1 mouse_genomes_project 3 5805538 5864216 - Tpd52 protein_coding processed_transcript MGP_129S1SvImJ_T0060036.1 MGP_129S1SvImJ_G0027055.1 mouse_genomes_project 3 5805600 5864257 - MGP_129S1SvImJ_P0060036 Tpd52 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0013985.1 MGP_129S1SvImJ_G0012074.1 mouse_genomes_project 3 24592681 24593069 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004410.1 MGP_129S1SvImJ_G0003850.1 mouse_genomes_project 3 144609761 144617039 - Gm15688 antisense antisense MGP_129S1SvImJ_T0010548.1 MGP_129S1SvImJ_G0008664.1 mouse_genomes_project 3 93923103 93923212 - Gm22752 miRNA miRNA MGP_129S1SvImJ_T0004277.1 MGP_129S1SvImJ_G0003765.1 mouse_genomes_project 3 79937745 79940852 - Gm37892 antisense antisense MGP_129S1SvImJ_T0004346.1 MGP_129S1SvImJ_G0003811.1 mouse_genomes_project 3 107390438 107409091 + Gm42722 antisense antisense MGP_129S1SvImJ_T0061647.1 MGP_129S1SvImJ_G0027402.1 mouse_genomes_project 3 88723164 88739149 + MGP_129S1SvImJ_P0061647 Ubqln4 protein_coding protein_coding MGP_129S1SvImJ_T0061648.1 MGP_129S1SvImJ_G0027402.1 mouse_genomes_project 3 88723170 88732984 + Ubqln4 protein_coding retained_intron MGP_129S1SvImJ_T0061649.1 MGP_129S1SvImJ_G0027402.1 mouse_genomes_project 3 88723202 88726262 + MGP_129S1SvImJ_P0061649 Ubqln4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061650.1 MGP_129S1SvImJ_G0027402.1 mouse_genomes_project 3 88726126 88733938 + Ubqln4 protein_coding processed_transcript MGP_129S1SvImJ_T0061651.1 MGP_129S1SvImJ_G0027402.1 mouse_genomes_project 3 88733330 88734698 + Ubqln4 protein_coding retained_intron MGP_129S1SvImJ_T0014372.1 MGP_129S1SvImJ_G0012461.1 mouse_genomes_project 3 148041401 148041968 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063744.1 MGP_129S1SvImJ_G0027874.1 mouse_genomes_project 3 132507661 132514194 - MGP_129S1SvImJ_P0063744 Gar1 protein_coding protein_coding MGP_129S1SvImJ_T0063745.1 MGP_129S1SvImJ_G0027874.1 mouse_genomes_project 3 132507665 132512170 - MGP_129S1SvImJ_P0063745 Gar1 protein_coding protein_coding MGP_129S1SvImJ_T0063746.1 MGP_129S1SvImJ_G0027874.1 mouse_genomes_project 3 132507668 132508418 - Gar1 protein_coding retained_intron MGP_129S1SvImJ_T0063747.1 MGP_129S1SvImJ_G0027874.1 mouse_genomes_project 3 132508295 132510030 - Gar1 protein_coding retained_intron MGP_129S1SvImJ_T0063748.1 MGP_129S1SvImJ_G0027874.1 mouse_genomes_project 3 132508314 132514158 - Gar1 protein_coding processed_transcript MGP_129S1SvImJ_T0063749.1 MGP_129S1SvImJ_G0027874.1 mouse_genomes_project 3 132509591 132513731 - MGP_129S1SvImJ_P0063749 Gar1 protein_coding protein_coding MGP_129S1SvImJ_T0098867.1 MGP_129S1SvImJ_G0036946.1 mouse_genomes_project 3 79238893 79247378 - sense_intronic sense_intronic MGP_129S1SvImJ_T0007778.1 MGP_129S1SvImJ_G0006364.1 mouse_genomes_project 3 154329253 154334755 + Gm43470 lincRNA lincRNA MGP_129S1SvImJ_T0007779.1 MGP_129S1SvImJ_G0006364.1 mouse_genomes_project 3 154329332 154350105 + Gm43470 lincRNA lincRNA MGP_129S1SvImJ_T0060966.1 MGP_129S1SvImJ_G0027243.1 mouse_genomes_project 3 57989214 58007384 - MGP_129S1SvImJ_P0060966 P2ry14 protein_coding protein_coding MGP_129S1SvImJ_T0060967.1 MGP_129S1SvImJ_G0027243.1 mouse_genomes_project 3 57989984 58029940 - MGP_129S1SvImJ_P0060967 P2ry14 protein_coding protein_coding MGP_129S1SvImJ_T0060968.1 MGP_129S1SvImJ_G0027243.1 mouse_genomes_project 3 57989984 58007246 - MGP_129S1SvImJ_P0060968 P2ry14 protein_coding protein_coding MGP_129S1SvImJ_T0060969.1 MGP_129S1SvImJ_G0027243.1 mouse_genomes_project 3 57989985 58007244 - MGP_129S1SvImJ_P0060969 P2ry14 protein_coding protein_coding MGP_129S1SvImJ_T0060970.1 MGP_129S1SvImJ_G0027243.1 mouse_genomes_project 3 57990291 58007949 - MGP_129S1SvImJ_P0060970 P2ry14 protein_coding protein_coding MGP_129S1SvImJ_T0060971.1 MGP_129S1SvImJ_G0027243.1 mouse_genomes_project 3 57991066 58007835 - MGP_129S1SvImJ_P0060971 P2ry14 protein_coding protein_coding MGP_129S1SvImJ_T0060972.1 MGP_129S1SvImJ_G0027243.1 mouse_genomes_project 3 57991370 58007740 - MGP_129S1SvImJ_P0060972 P2ry14 protein_coding protein_coding MGP_129S1SvImJ_T0060973.1 MGP_129S1SvImJ_G0027243.1 mouse_genomes_project 3 57991385 58009076 - MGP_129S1SvImJ_P0060973 P2ry14 protein_coding protein_coding MGP_129S1SvImJ_T0060974.1 MGP_129S1SvImJ_G0027243.1 mouse_genomes_project 3 58022276 58030066 - P2ry14 protein_coding retained_intron MGP_129S1SvImJ_T0062100.1 MGP_129S1SvImJ_G0027478.1 mouse_genomes_project 3 90989788 90994186 + MGP_129S1SvImJ_P0062100 S100a7a protein_coding protein_coding MGP_129S1SvImJ_T0011571.1 MGP_129S1SvImJ_G0009687.1 mouse_genomes_project 3 127213850 127214148 + Gm23673 misc_RNA misc_RNA MGP_129S1SvImJ_T0060037.1 MGP_129S1SvImJ_G0027056.1 mouse_genomes_project 3 6131929 6171873 + MGP_129S1SvImJ_P0060037 Zbtb10 protein_coding protein_coding MGP_129S1SvImJ_T0007797.1 MGP_129S1SvImJ_G0006375.1 mouse_genomes_project 3 161855577 161863160 - Gm33466 lincRNA lincRNA MGP_129S1SvImJ_T0007586.1 MGP_129S1SvImJ_G0006212.1 mouse_genomes_project 3 75231636 75267088 + lincRNA lincRNA MGP_129S1SvImJ_T0014088.1 MGP_129S1SvImJ_G0012177.1 mouse_genomes_project 3 59817682 59818061 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010563.1 MGP_129S1SvImJ_G0008679.1 mouse_genomes_project 3 124817849 124817906 - Mir7657 miRNA miRNA MGP_129S1SvImJ_T0062942.1 MGP_129S1SvImJ_G0027705.1 mouse_genomes_project 3 105318587 105514777 - MGP_129S1SvImJ_P0062942 Magi3 protein_coding protein_coding MGP_129S1SvImJ_T0062943.1 MGP_129S1SvImJ_G0027705.1 mouse_genomes_project 3 105318953 105514777 - MGP_129S1SvImJ_P0062943 Magi3 protein_coding protein_coding MGP_129S1SvImJ_T0062944.1 MGP_129S1SvImJ_G0027705.1 mouse_genomes_project 3 105321797 105514777 - MGP_129S1SvImJ_P0062944 Magi3 protein_coding protein_coding MGP_129S1SvImJ_T0062945.1 MGP_129S1SvImJ_G0027705.1 mouse_genomes_project 3 105364044 105365849 - Magi3 protein_coding retained_intron MGP_129S1SvImJ_T0101079.1 MGP_129S1SvImJ_G0039146.1 mouse_genomes_project 3 157877813 157877884 - Snord45b snoRNA snoRNA MGP_129S1SvImJ_T0010543.1 MGP_129S1SvImJ_G0008659.1 mouse_genomes_project 3 90272564 90272622 - Mir7669 miRNA miRNA MGP_129S1SvImJ_T0001164.1 MGP_129S1SvImJ_G0001090.1 mouse_genomes_project 3 31717579 31722914 + TEC TEC MGP_129S1SvImJ_T0010561.1 MGP_129S1SvImJ_G0008677.1 mouse_genomes_project 3 120459118 120459228 + Gm24155 miRNA miRNA MGP_129S1SvImJ_T0007507.1 MGP_129S1SvImJ_G0006155.1 mouse_genomes_project 3 32464262 32477218 + Gm38509 lincRNA lincRNA MGP_129S1SvImJ_T0014383.1 MGP_129S1SvImJ_G0012472.1 mouse_genomes_project 3 155802310 155803017 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061429.1 MGP_129S1SvImJ_G0027356.1 mouse_genomes_project 3 86856875 86997733 - MGP_129S1SvImJ_P0061429 Dclk2 protein_coding protein_coding MGP_129S1SvImJ_T0061430.1 MGP_129S1SvImJ_G0027356.1 mouse_genomes_project 3 86856877 86998206 - MGP_129S1SvImJ_P0061430 Dclk2 protein_coding protein_coding MGP_129S1SvImJ_T0061431.1 MGP_129S1SvImJ_G0027356.1 mouse_genomes_project 3 86856877 86997542 - MGP_129S1SvImJ_P0061431 Dclk2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061432.1 MGP_129S1SvImJ_G0027356.1 mouse_genomes_project 3 86856883 86997689 - MGP_129S1SvImJ_P0061432 Dclk2 protein_coding protein_coding MGP_129S1SvImJ_T0061433.1 MGP_129S1SvImJ_G0027356.1 mouse_genomes_project 3 86857936 86997524 - MGP_129S1SvImJ_P0061433 Dclk2 protein_coding protein_coding MGP_129S1SvImJ_T0061434.1 MGP_129S1SvImJ_G0027356.1 mouse_genomes_project 3 86857965 86863040 - Dclk2 protein_coding processed_transcript MGP_129S1SvImJ_T0061435.1 MGP_129S1SvImJ_G0027356.1 mouse_genomes_project 3 86858073 86869885 - Dclk2 protein_coding processed_transcript MGP_129S1SvImJ_T0061436.1 MGP_129S1SvImJ_G0027356.1 mouse_genomes_project 3 86860070 86868737 - Dclk2 protein_coding processed_transcript MGP_129S1SvImJ_T0061437.1 MGP_129S1SvImJ_G0027356.1 mouse_genomes_project 3 86869645 86997728 - MGP_129S1SvImJ_P0061437 Dclk2 protein_coding protein_coding MGP_129S1SvImJ_T0063371.1 MGP_129S1SvImJ_G0027809.1 mouse_genomes_project 3 118163235 118322848 - MGP_129S1SvImJ_P0063371 Cdc14a protein_coding protein_coding MGP_129S1SvImJ_T0063372.1 MGP_129S1SvImJ_G0027809.1 mouse_genomes_project 3 118163235 118322802 - MGP_129S1SvImJ_P0063372 Cdc14a protein_coding protein_coding MGP_129S1SvImJ_T0063373.1 MGP_129S1SvImJ_G0027809.1 mouse_genomes_project 3 118215174 118321465 - MGP_129S1SvImJ_P0063373 Cdc14a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063374.1 MGP_129S1SvImJ_G0027809.1 mouse_genomes_project 3 118219762 118322848 - Cdc14a protein_coding retained_intron MGP_129S1SvImJ_T0063375.1 MGP_129S1SvImJ_G0027809.1 mouse_genomes_project 3 118298080 118321840 - Cdc14a protein_coding retained_intron MGP_129S1SvImJ_T0063376.1 MGP_129S1SvImJ_G0027809.1 mouse_genomes_project 3 118301286 118303388 - Cdc14a protein_coding retained_intron MGP_129S1SvImJ_T0063377.1 MGP_129S1SvImJ_G0027809.1 mouse_genomes_project 3 118302007 118322711 - Cdc14a protein_coding processed_transcript MGP_129S1SvImJ_T0063812.1 MGP_129S1SvImJ_G0027888.1 mouse_genomes_project 3 134118128 134144684 - MGP_129S1SvImJ_P0063812 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0063813.1 MGP_129S1SvImJ_G0027888.1 mouse_genomes_project 3 134143284 134146115 - MGP_129S1SvImJ_P0063813 protein_coding protein_coding MGP_129S1SvImJ_T0063814.1 MGP_129S1SvImJ_G0027888.1 mouse_genomes_project 3 134143343 134211613 - MGP_129S1SvImJ_P0063814 protein_coding protein_coding MGP_129S1SvImJ_T0063815.1 MGP_129S1SvImJ_G0027888.1 mouse_genomes_project 3 134143408 134212545 - protein_coding processed_transcript MGP_129S1SvImJ_T0007682.1 MGP_129S1SvImJ_G0006287.1 mouse_genomes_project 3 119970352 119975940 + 4921521D15Rik lincRNA lincRNA MGP_129S1SvImJ_T0001308.1 MGP_129S1SvImJ_G0001232.1 mouse_genomes_project 3 112258761 112261295 + TEC TEC MGP_129S1SvImJ_T0007583.1 MGP_129S1SvImJ_G0006210.1 mouse_genomes_project 3 73434241 73446082 - Gm20356 lincRNA lincRNA MGP_129S1SvImJ_T0099748.1 MGP_129S1SvImJ_G0037815.1 mouse_genomes_project 3 72114809 72114960 - Gm22451 snRNA snRNA MGP_129S1SvImJ_T0098877.1 MGP_129S1SvImJ_G0036955.1 mouse_genomes_project 3 100208127 100212489 + Gm43024 sense_intronic sense_intronic MGP_129S1SvImJ_T0001333.1 MGP_129S1SvImJ_G0001257.1 mouse_genomes_project 3 126006761 126009584 - TEC TEC MGP_129S1SvImJ_T0101039.1 MGP_129S1SvImJ_G0039106.1 mouse_genomes_project 3 86173064 86173132 - Snord73a snoRNA snoRNA MGP_129S1SvImJ_T0001230.1 MGP_129S1SvImJ_G0001154.1 mouse_genomes_project 3 51680873 51685049 + TEC TEC MGP_129S1SvImJ_T0062339.1 MGP_129S1SvImJ_G0027571.1 mouse_genomes_project 3 95828773 95834267 + MGP_129S1SvImJ_P0062339 protein_coding protein_coding MGP_129S1SvImJ_T0101912.1 MGP_129S1SvImJ_G0039822.1 mouse_genomes_project 3 129963733 129966358 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0014252.1 MGP_129S1SvImJ_G0012341.1 mouse_genomes_project 3 109440865 109441013 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063873.1 MGP_129S1SvImJ_G0027900.1 mouse_genomes_project 3 137046893 137073571 + protein_coding processed_transcript MGP_129S1SvImJ_T0063874.1 MGP_129S1SvImJ_G0027900.1 mouse_genomes_project 3 137046900 137076124 + MGP_129S1SvImJ_P0063874 protein_coding protein_coding MGP_129S1SvImJ_T0063875.1 MGP_129S1SvImJ_G0027900.1 mouse_genomes_project 3 137046904 137048794 + protein_coding retained_intron MGP_129S1SvImJ_T0063876.1 MGP_129S1SvImJ_G0027900.1 mouse_genomes_project 3 137047229 137072182 + MGP_129S1SvImJ_P0063876 protein_coding protein_coding MGP_129S1SvImJ_T0063877.1 MGP_129S1SvImJ_G0027900.1 mouse_genomes_project 3 137052648 137058976 + protein_coding retained_intron MGP_129S1SvImJ_T0061270.1 MGP_129S1SvImJ_G0027316.1 mouse_genomes_project 3 79344775 79448532 - MGP_129S1SvImJ_P0061270 Rxfp1 protein_coding protein_coding MGP_129S1SvImJ_T0061271.1 MGP_129S1SvImJ_G0027316.1 mouse_genomes_project 3 79347283 79448618 - MGP_129S1SvImJ_P0061271 Rxfp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061272.1 MGP_129S1SvImJ_G0027316.1 mouse_genomes_project 3 79353583 79448532 - MGP_129S1SvImJ_P0061272 Rxfp1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0061273.1 MGP_129S1SvImJ_G0027316.1 mouse_genomes_project 3 79354660 79356544 - Rxfp1 protein_coding retained_intron MGP_129S1SvImJ_T0061274.1 MGP_129S1SvImJ_G0027316.1 mouse_genomes_project 3 79358325 79372522 - Rxfp1 protein_coding processed_transcript MGP_129S1SvImJ_T0014183.1 MGP_129S1SvImJ_G0012272.1 mouse_genomes_project 3 92752220 92752357 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099733.1 MGP_129S1SvImJ_G0037800.1 mouse_genomes_project 3 52471598 52471701 + Gm24851 snRNA snRNA MGP_129S1SvImJ_T0014143.1 MGP_129S1SvImJ_G0012232.1 mouse_genomes_project 3 77522003 77522375 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063089.1 MGP_129S1SvImJ_G0027743.1 mouse_genomes_project 3 108708695 108712804 + MGP_129S1SvImJ_P0063089 A630076J17Rik protein_coding protein_coding MGP_129S1SvImJ_T0098924.1 MGP_129S1SvImJ_G0037002.1 mouse_genomes_project 3 131840686 131842174 + Gm27195 sense_intronic sense_intronic MGP_129S1SvImJ_T0001312.1 MGP_129S1SvImJ_G0001236.1 mouse_genomes_project 3 118475419 118477781 - TEC TEC MGP_129S1SvImJ_T0063118.1 MGP_129S1SvImJ_G0027753.1 mouse_genomes_project 3 109130557 109132300 + MGP_129S1SvImJ_P0063118 Gm10961 protein_coding protein_coding MGP_129S1SvImJ_T0014128.1 MGP_129S1SvImJ_G0012217.1 mouse_genomes_project 3 71014622 71019045 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102485.1 MGP_129S1SvImJ_G0040319.1 mouse_genomes_project 3 94506849 94507039 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0062619.1 MGP_129S1SvImJ_G0027632.1 mouse_genomes_project 3 97620590 97693182 + MGP_129S1SvImJ_P0062619 Rnf115 protein_coding protein_coding MGP_129S1SvImJ_T0062620.1 MGP_129S1SvImJ_G0027632.1 mouse_genomes_project 3 97620598 97693668 + MGP_129S1SvImJ_P0062620 Rnf115 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062621.1 MGP_129S1SvImJ_G0027632.1 mouse_genomes_project 3 97620735 97692036 + MGP_129S1SvImJ_P0062621 Rnf115 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0062622.1 MGP_129S1SvImJ_G0027632.1 mouse_genomes_project 3 97620765 97685789 + Rnf115 protein_coding processed_transcript MGP_129S1SvImJ_T0061314.1 MGP_129S1SvImJ_G0027326.1 mouse_genomes_project 3 81889753 81945835 - MGP_129S1SvImJ_P0061314 Gucy1a3 protein_coding protein_coding MGP_129S1SvImJ_T0061315.1 MGP_129S1SvImJ_G0027326.1 mouse_genomes_project 3 81889763 81946549 - MGP_129S1SvImJ_P0061315 Gucy1a3 protein_coding protein_coding MGP_129S1SvImJ_T0061316.1 MGP_129S1SvImJ_G0027326.1 mouse_genomes_project 3 81891879 81899345 - MGP_129S1SvImJ_P0061316 Gucy1a3 protein_coding protein_coding MGP_129S1SvImJ_T0061317.1 MGP_129S1SvImJ_G0027326.1 mouse_genomes_project 3 81904023 81946551 - Gucy1a3 protein_coding retained_intron MGP_129S1SvImJ_T0061318.1 MGP_129S1SvImJ_G0027326.1 mouse_genomes_project 3 81916414 81946367 - Gucy1a3 protein_coding processed_transcript MGP_129S1SvImJ_T0004342.1 MGP_129S1SvImJ_G0003808.1 mouse_genomes_project 3 105711381 105721102 + Gm43257 antisense antisense MGP_129S1SvImJ_T0014350.1 MGP_129S1SvImJ_G0012439.1 mouse_genomes_project 3 140932849 140934367 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099739.1 MGP_129S1SvImJ_G0037806.1 mouse_genomes_project 3 57845584 57845756 - Gm25572 snRNA snRNA MGP_129S1SvImJ_T0001153.1 MGP_129S1SvImJ_G0001079.1 mouse_genomes_project 3 28090331 28091221 - TEC TEC MGP_129S1SvImJ_T0014249.1 MGP_129S1SvImJ_G0012338.1 mouse_genomes_project 3 108825065 108825810 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013945.1 MGP_129S1SvImJ_G0012034.1 mouse_genomes_project 3 10861226 10861481 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014301.1 MGP_129S1SvImJ_G0012390.1 mouse_genomes_project 3 124912468 124913725 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062024.1 MGP_129S1SvImJ_G0027461.1 mouse_genomes_project 3 90589633 90669538 + MGP_129S1SvImJ_P0062024 Gatad2b protein_coding protein_coding MGP_129S1SvImJ_T0062025.1 MGP_129S1SvImJ_G0027461.1 mouse_genomes_project 3 90589639 90655622 + Gatad2b protein_coding retained_intron MGP_129S1SvImJ_T0062026.1 MGP_129S1SvImJ_G0027461.1 mouse_genomes_project 3 90590961 90661443 + MGP_129S1SvImJ_P0062026 Gatad2b protein_coding protein_coding MGP_129S1SvImJ_T0062027.1 MGP_129S1SvImJ_G0027461.1 mouse_genomes_project 3 90642061 90644456 + Gatad2b protein_coding retained_intron MGP_129S1SvImJ_T0062028.1 MGP_129S1SvImJ_G0027461.1 mouse_genomes_project 3 90642686 90661190 + MGP_129S1SvImJ_P0062028 Gatad2b protein_coding protein_coding MGP_129S1SvImJ_T0062029.1 MGP_129S1SvImJ_G0027461.1 mouse_genomes_project 3 90642688 90661183 + Gatad2b protein_coding retained_intron MGP_129S1SvImJ_T0062030.1 MGP_129S1SvImJ_G0027461.1 mouse_genomes_project 3 90642688 90661149 + MGP_129S1SvImJ_P0062030 Gatad2b protein_coding protein_coding MGP_129S1SvImJ_T0062031.1 MGP_129S1SvImJ_G0027461.1 mouse_genomes_project 3 90654487 90659204 + MGP_129S1SvImJ_P0062031 Gatad2b protein_coding protein_coding MGP_129S1SvImJ_T0007564.1 MGP_129S1SvImJ_G0006194.1 mouse_genomes_project 3 56755439 56760010 - Gm42512 lincRNA lincRNA MGP_129S1SvImJ_T0063527.1 MGP_129S1SvImJ_G0027838.1 mouse_genomes_project 3 124533962 124544833 + MGP_129S1SvImJ_P0063527 Dnttip2 protein_coding protein_coding MGP_129S1SvImJ_T0063528.1 MGP_129S1SvImJ_G0027838.1 mouse_genomes_project 3 124533992 124535785 + Dnttip2 protein_coding processed_transcript MGP_129S1SvImJ_T0063529.1 MGP_129S1SvImJ_G0027838.1 mouse_genomes_project 3 124535591 124544811 + Dnttip2 protein_coding processed_transcript MGP_129S1SvImJ_T0063530.1 MGP_129S1SvImJ_G0027838.1 mouse_genomes_project 3 124536344 124539178 + Dnttip2 protein_coding retained_intron MGP_129S1SvImJ_T0063531.1 MGP_129S1SvImJ_G0027838.1 mouse_genomes_project 3 124540143 124544660 + Dnttip2 protein_coding retained_intron MGP_129S1SvImJ_T0014078.1 MGP_129S1SvImJ_G0012167.1 mouse_genomes_project 3 57517836 57518789 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013956.1 MGP_129S1SvImJ_G0012045.1 mouse_genomes_project 3 13315293 13315468 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061732.1 MGP_129S1SvImJ_G0027414.1 mouse_genomes_project 3 89268368 89274433 - MGP_129S1SvImJ_P0061732 Rusc1 protein_coding protein_coding MGP_129S1SvImJ_T0061733.1 MGP_129S1SvImJ_G0027414.1 mouse_genomes_project 3 89268368 89277678 - MGP_129S1SvImJ_P0061733 Rusc1 protein_coding protein_coding MGP_129S1SvImJ_T0061734.1 MGP_129S1SvImJ_G0027414.1 mouse_genomes_project 3 89268368 89277699 - MGP_129S1SvImJ_P0061734 Rusc1 protein_coding protein_coding MGP_129S1SvImJ_T0061735.1 MGP_129S1SvImJ_G0027414.1 mouse_genomes_project 3 89271508 89274129 - Rusc1 protein_coding retained_intron MGP_129S1SvImJ_T0061736.1 MGP_129S1SvImJ_G0027414.1 mouse_genomes_project 3 89272608 89274363 - MGP_129S1SvImJ_P0061736 Rusc1 protein_coding protein_coding MGP_129S1SvImJ_T0061737.1 MGP_129S1SvImJ_G0027414.1 mouse_genomes_project 3 89273442 89274143 - Rusc1 protein_coding retained_intron MGP_129S1SvImJ_T0061738.1 MGP_129S1SvImJ_G0027414.1 mouse_genomes_project 3 89273626 89274363 - MGP_129S1SvImJ_P0061738 Rusc1 protein_coding protein_coding MGP_129S1SvImJ_T0001130.1 MGP_129S1SvImJ_G0001056.1 mouse_genomes_project 3 6383409 6387170 + TEC TEC MGP_129S1SvImJ_T0062529.1 MGP_129S1SvImJ_G0027603.1 mouse_genomes_project 3 96796610 96861823 - MGP_129S1SvImJ_P0062529 Vps45 protein_coding protein_coding MGP_129S1SvImJ_T0062530.1 MGP_129S1SvImJ_G0027603.1 mouse_genomes_project 3 96848445 96861187 - Vps45 protein_coding retained_intron MGP_129S1SvImJ_T0062531.1 MGP_129S1SvImJ_G0027603.1 mouse_genomes_project 3 96860243 96861076 - Vps45 protein_coding processed_transcript MGP_129S1SvImJ_T0010519.1 MGP_129S1SvImJ_G0008635.1 mouse_genomes_project 3 28553959 28554022 + Mir7008 miRNA miRNA MGP_129S1SvImJ_T0014375.1 MGP_129S1SvImJ_G0012464.1 mouse_genomes_project 3 149191444 149191884 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013993.1 MGP_129S1SvImJ_G0012082.1 mouse_genomes_project 3 29837371 29838143 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014269.1 MGP_129S1SvImJ_G0012358.1 mouse_genomes_project 3 114043184 114043971 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014335.1 MGP_129S1SvImJ_G0012424.1 mouse_genomes_project 3 137819176 137819630 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062707.1 MGP_129S1SvImJ_G0027654.1 mouse_genomes_project 3 99448047 99459882 - MGP_129S1SvImJ_P0062707 protein_coding protein_coding MGP_129S1SvImJ_T0013949.1 MGP_129S1SvImJ_G0012038.1 mouse_genomes_project 3 11534141 11546125 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099770.1 MGP_129S1SvImJ_G0037837.1 mouse_genomes_project 3 95789666 95789773 + Gm22301 snRNA snRNA MGP_129S1SvImJ_T0064229.1 MGP_129S1SvImJ_G0027973.1 mouse_genomes_project 3 150021759 150027541 + MGP_129S1SvImJ_P0064229 Gng5 protein_coding protein_coding MGP_129S1SvImJ_T0064230.1 MGP_129S1SvImJ_G0027973.1 mouse_genomes_project 3 150021948 150027542 + MGP_129S1SvImJ_P0064230 Gng5 protein_coding protein_coding MGP_129S1SvImJ_T0102493.1 MGP_129S1SvImJ_G0040327.1 mouse_genomes_project 3 94756868 94757061 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0061907.1 MGP_129S1SvImJ_G0027444.1 mouse_genomes_project 3 89947629 89949297 + Adar protein_coding retained_intron MGP_129S1SvImJ_T0061908.1 MGP_129S1SvImJ_G0027444.1 mouse_genomes_project 3 89947939 89967759 + Adar protein_coding processed_transcript MGP_129S1SvImJ_T0061909.1 MGP_129S1SvImJ_G0027444.1 mouse_genomes_project 3 89963355 89985000 + MGP_129S1SvImJ_P0061909 Adar protein_coding protein_coding MGP_129S1SvImJ_T0061910.1 MGP_129S1SvImJ_G0027444.1 mouse_genomes_project 3 89963355 89985000 + MGP_129S1SvImJ_P0061910 Adar protein_coding protein_coding MGP_129S1SvImJ_T0061911.1 MGP_129S1SvImJ_G0027444.1 mouse_genomes_project 3 89963355 89985000 + MGP_129S1SvImJ_P0061911 Adar protein_coding protein_coding MGP_129S1SvImJ_T0061912.1 MGP_129S1SvImJ_G0027444.1 mouse_genomes_project 3 89963418 89984769 + MGP_129S1SvImJ_P0061912 Adar protein_coding protein_coding MGP_129S1SvImJ_T0061913.1 MGP_129S1SvImJ_G0027444.1 mouse_genomes_project 3 89970191 89971895 + Adar protein_coding retained_intron MGP_129S1SvImJ_T0061914.1 MGP_129S1SvImJ_G0027444.1 mouse_genomes_project 3 89979390 89980957 + Adar protein_coding retained_intron MGP_129S1SvImJ_T0060100.1 MGP_129S1SvImJ_G0027077.1 mouse_genomes_project 3 11893956 11951620 - MGP_129S1SvImJ_P0060100 Car1 protein_coding protein_coding MGP_129S1SvImJ_T0060101.1 MGP_129S1SvImJ_G0027077.1 mouse_genomes_project 3 11893957 11917552 - MGP_129S1SvImJ_P0060101 Car1 protein_coding protein_coding MGP_129S1SvImJ_T0060102.1 MGP_129S1SvImJ_G0027077.1 mouse_genomes_project 3 11909021 11951623 - MGP_129S1SvImJ_P0060102 Car1 protein_coding protein_coding MGP_129S1SvImJ_T0063137.1 MGP_129S1SvImJ_G0027757.1 mouse_genomes_project 3 109413241 109416107 + MGP_129S1SvImJ_P0063137 Gstm5 protein_coding protein_coding MGP_129S1SvImJ_T0063138.1 MGP_129S1SvImJ_G0027757.1 mouse_genomes_project 3 109413256 109415996 + MGP_129S1SvImJ_P0063138 Gstm5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063139.1 MGP_129S1SvImJ_G0027757.1 mouse_genomes_project 3 109413266 109416107 + MGP_129S1SvImJ_P0063139 Gstm5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063140.1 MGP_129S1SvImJ_G0027757.1 mouse_genomes_project 3 109413361 109415766 + MGP_129S1SvImJ_P0063140 Gstm5 protein_coding protein_coding MGP_129S1SvImJ_T0063141.1 MGP_129S1SvImJ_G0027757.1 mouse_genomes_project 3 109413374 109415970 + MGP_129S1SvImJ_P0063141 Gstm5 protein_coding protein_coding MGP_129S1SvImJ_T0063142.1 MGP_129S1SvImJ_G0027757.1 mouse_genomes_project 3 109413667 109416099 + MGP_129S1SvImJ_P0063142 Gstm5 protein_coding protein_coding MGP_129S1SvImJ_T0063799.1 MGP_129S1SvImJ_G0027885.1 mouse_genomes_project 3 133893979 134018711 + MGP_129S1SvImJ_P0063799 Lef1 protein_coding protein_coding MGP_129S1SvImJ_T0063800.1 MGP_129S1SvImJ_G0027885.1 mouse_genomes_project 3 133893979 134018711 + MGP_129S1SvImJ_P0063800 Lef1 protein_coding protein_coding MGP_129S1SvImJ_T0063801.1 MGP_129S1SvImJ_G0027885.1 mouse_genomes_project 3 133893979 134018711 + MGP_129S1SvImJ_P0063801 Lef1 protein_coding protein_coding MGP_129S1SvImJ_T0063802.1 MGP_129S1SvImJ_G0027885.1 mouse_genomes_project 3 133896303 133900908 + Lef1 protein_coding retained_intron MGP_129S1SvImJ_T0063803.1 MGP_129S1SvImJ_G0027885.1 mouse_genomes_project 3 133896303 134018711 + MGP_129S1SvImJ_P0063803 Lef1 protein_coding protein_coding MGP_129S1SvImJ_T0063804.1 MGP_129S1SvImJ_G0027885.1 mouse_genomes_project 3 133896312 133980032 + Lef1 protein_coding retained_intron MGP_129S1SvImJ_T0063805.1 MGP_129S1SvImJ_G0027885.1 mouse_genomes_project 3 133897320 133976694 + Lef1 protein_coding retained_intron MGP_129S1SvImJ_T0063806.1 MGP_129S1SvImJ_G0027885.1 mouse_genomes_project 3 133897362 133996158 + Lef1 protein_coding processed_transcript MGP_129S1SvImJ_T0007798.1 MGP_129S1SvImJ_G0006376.1 mouse_genomes_project 3 163259526 163458058 + Gm20752 lincRNA lincRNA MGP_129S1SvImJ_T0014074.1 MGP_129S1SvImJ_G0012163.1 mouse_genomes_project 3 56763978 56765157 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001157.1 MGP_129S1SvImJ_G0001083.1 mouse_genomes_project 3 30057056 30058115 + TEC TEC MGP_129S1SvImJ_T0014339.1 MGP_129S1SvImJ_G0012428.1 mouse_genomes_project 3 138034209 138034885 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063082.1 MGP_129S1SvImJ_G0027739.1 mouse_genomes_project 3 108501441 108503343 + MGP_129S1SvImJ_P0063082 Kcna3 protein_coding protein_coding MGP_129S1SvImJ_T0102504.1 MGP_129S1SvImJ_G0040338.1 mouse_genomes_project 3 109474240 109479079 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0014256.1 MGP_129S1SvImJ_G0012345.1 mouse_genomes_project 3 109778490 109779019 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001170.1 MGP_129S1SvImJ_G0001096.1 mouse_genomes_project 3 33724635 33727278 - TEC TEC MGP_129S1SvImJ_T0061922.1 MGP_129S1SvImJ_G0027448.1 mouse_genomes_project 3 90102972 90162879 - MGP_129S1SvImJ_P0061922 Il6ra protein_coding protein_coding MGP_129S1SvImJ_T0061923.1 MGP_129S1SvImJ_G0027448.1 mouse_genomes_project 3 90108050 90162845 - MGP_129S1SvImJ_P0061923 Il6ra protein_coding protein_coding MGP_129S1SvImJ_T0099735.1 MGP_129S1SvImJ_G0037802.1 mouse_genomes_project 3 54285352 54285459 + Gm25404 snRNA snRNA MGP_129S1SvImJ_T0098906.1 MGP_129S1SvImJ_G0036984.1 mouse_genomes_project 3 105461969 105465246 - Gm43259 sense_intronic sense_intronic MGP_129S1SvImJ_T0062868.1 MGP_129S1SvImJ_G0027692.1 mouse_genomes_project 3 104419334 104427700 + MGP_129S1SvImJ_P0062868 Bcas2 protein_coding protein_coding MGP_129S1SvImJ_T0062869.1 MGP_129S1SvImJ_G0027692.1 mouse_genomes_project 3 104419382 104426551 + Bcas2 protein_coding retained_intron MGP_129S1SvImJ_T0062870.1 MGP_129S1SvImJ_G0027692.1 mouse_genomes_project 3 104419428 104426553 + Bcas2 protein_coding retained_intron MGP_129S1SvImJ_T0062871.1 MGP_129S1SvImJ_G0027692.1 mouse_genomes_project 3 104419441 104426172 + MGP_129S1SvImJ_P0062871 Bcas2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062872.1 MGP_129S1SvImJ_G0027692.1 mouse_genomes_project 3 104419451 104427714 + MGP_129S1SvImJ_P0062872 Bcas2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062873.1 MGP_129S1SvImJ_G0027692.1 mouse_genomes_project 3 104419464 104422263 + Bcas2 protein_coding retained_intron MGP_129S1SvImJ_T0013979.1 MGP_129S1SvImJ_G0012068.1 mouse_genomes_project 3 20575963 20576339 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062142.1 MGP_129S1SvImJ_G0027513.1 mouse_genomes_project 3 93198165 93199611 - MGP_129S1SvImJ_P0062142 Gm38119 protein_coding protein_coding MGP_129S1SvImJ_T0007678.1 MGP_129S1SvImJ_G0006283.1 mouse_genomes_project 3 118390441 118394874 + Gm26530 lincRNA lincRNA MGP_129S1SvImJ_T0004337.1 MGP_129S1SvImJ_G0003806.1 mouse_genomes_project 3 105060344 105062812 + Gm15886 antisense antisense MGP_129S1SvImJ_T0004338.1 MGP_129S1SvImJ_G0003806.1 mouse_genomes_project 3 105060365 105077376 + Gm15886 antisense antisense MGP_129S1SvImJ_T0004339.1 MGP_129S1SvImJ_G0003806.1 mouse_genomes_project 3 105060700 105066374 + Gm15886 antisense antisense MGP_129S1SvImJ_T0004340.1 MGP_129S1SvImJ_G0003806.1 mouse_genomes_project 3 105065792 105066785 + Gm15886 antisense antisense MGP_129S1SvImJ_T0063344.1 MGP_129S1SvImJ_G0027802.1 mouse_genomes_project 3 116732075 116960795 + MGP_129S1SvImJ_P0063344 Olfm3 protein_coding protein_coding MGP_129S1SvImJ_T0063345.1 MGP_129S1SvImJ_G0027802.1 mouse_genomes_project 3 116732632 116956047 + MGP_129S1SvImJ_P0063345 Olfm3 protein_coding protein_coding MGP_129S1SvImJ_T0063346.1 MGP_129S1SvImJ_G0027802.1 mouse_genomes_project 3 116915087 116960329 + MGP_129S1SvImJ_P0063346 Olfm3 protein_coding protein_coding MGP_129S1SvImJ_T0098896.1 MGP_129S1SvImJ_G0036974.1 mouse_genomes_project 3 105070290 105071356 - Gm43387 sense_intronic sense_intronic MGP_129S1SvImJ_T0001242.1 MGP_129S1SvImJ_G0001166.1 mouse_genomes_project 3 56436583 56440538 - TEC TEC MGP_129S1SvImJ_T0001252.1 MGP_129S1SvImJ_G0001176.1 mouse_genomes_project 3 64607885 64608834 - TEC TEC MGP_129S1SvImJ_T0004372.1 MGP_129S1SvImJ_G0003824.1 mouse_genomes_project 3 123726232 123732166 + A530020G20Rik antisense antisense MGP_129S1SvImJ_T0004373.1 MGP_129S1SvImJ_G0003824.1 mouse_genomes_project 3 123726242 123727097 + A530020G20Rik antisense antisense MGP_129S1SvImJ_T0004374.1 MGP_129S1SvImJ_G0003824.1 mouse_genomes_project 3 123726292 123729576 + A530020G20Rik antisense antisense MGP_129S1SvImJ_T0001381.1 MGP_129S1SvImJ_G0001304.1 mouse_genomes_project 3 138563196 138567098 - TEC TEC MGP_129S1SvImJ_T0014289.1 MGP_129S1SvImJ_G0012378.1 mouse_genomes_project 3 119195591 119196234 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011569.1 MGP_129S1SvImJ_G0009685.1 mouse_genomes_project 3 108905901 108906234 - Gm24383 misc_RNA misc_RNA MGP_129S1SvImJ_T0062452.1 MGP_129S1SvImJ_G0027592.1 mouse_genomes_project 3 96503357 96508780 - MGP_129S1SvImJ_P0062452 Ecm1 protein_coding protein_coding MGP_129S1SvImJ_T0062453.1 MGP_129S1SvImJ_G0027592.1 mouse_genomes_project 3 96503358 96508778 - MGP_129S1SvImJ_P0062453 Ecm1 protein_coding protein_coding MGP_129S1SvImJ_T0062454.1 MGP_129S1SvImJ_G0027592.1 mouse_genomes_project 3 96503359 96504229 - Ecm1 protein_coding retained_intron MGP_129S1SvImJ_T0062455.1 MGP_129S1SvImJ_G0027592.1 mouse_genomes_project 3 96505347 96508760 - MGP_129S1SvImJ_P0062455 Ecm1 protein_coding protein_coding MGP_129S1SvImJ_T0062456.1 MGP_129S1SvImJ_G0027592.1 mouse_genomes_project 3 96505359 96508778 - MGP_129S1SvImJ_P0062456 Ecm1 protein_coding protein_coding MGP_129S1SvImJ_T0062457.1 MGP_129S1SvImJ_G0027592.1 mouse_genomes_project 3 96505420 96508780 - MGP_129S1SvImJ_P0062457 Ecm1 protein_coding protein_coding MGP_129S1SvImJ_T0062458.1 MGP_129S1SvImJ_G0027592.1 mouse_genomes_project 3 96505810 96508755 - MGP_129S1SvImJ_P0062458 Ecm1 protein_coding protein_coding MGP_129S1SvImJ_T0062459.1 MGP_129S1SvImJ_G0027592.1 mouse_genomes_project 3 96505971 96508760 - MGP_129S1SvImJ_P0062459 Ecm1 protein_coding protein_coding MGP_129S1SvImJ_T0062460.1 MGP_129S1SvImJ_G0027592.1 mouse_genomes_project 3 96506560 96507434 - Ecm1 protein_coding retained_intron MGP_129S1SvImJ_T0062461.1 MGP_129S1SvImJ_G0027592.1 mouse_genomes_project 3 96507094 96508780 - MGP_129S1SvImJ_P0062461 Ecm1 protein_coding protein_coding MGP_129S1SvImJ_T0099737.1 MGP_129S1SvImJ_G0037804.1 mouse_genomes_project 3 57111460 57111567 - Gm26166 snRNA snRNA MGP_129S1SvImJ_T0014354.1 MGP_129S1SvImJ_G0012443.1 mouse_genomes_project 3 141666034 141666694 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010569.1 MGP_129S1SvImJ_G0008685.1 mouse_genomes_project 3 132347465 132347624 - Gm24515 miRNA miRNA MGP_129S1SvImJ_T0101082.1 MGP_129S1SvImJ_G0039149.1 mouse_genomes_project 3 161326126 161326258 + Gm24373 snoRNA snoRNA MGP_129S1SvImJ_T0101074.1 MGP_129S1SvImJ_G0039141.1 mouse_genomes_project 3 147898392 147898520 - Gm24406 snoRNA snoRNA MGP_129S1SvImJ_T0101009.1 MGP_129S1SvImJ_G0039076.1 mouse_genomes_project 3 11376887 11377012 - Gm23112 snoRNA snoRNA MGP_129S1SvImJ_T0062137.1 MGP_129S1SvImJ_G0027508.1 mouse_genomes_project 3 93126745 93128448 - MGP_129S1SvImJ_P0062137 Lce1a2 protein_coding protein_coding MGP_129S1SvImJ_T0063299.1 MGP_129S1SvImJ_G0027794.1 mouse_genomes_project 3 110952043 111307351 + MGP_129S1SvImJ_P0063299 Vav3 protein_coding protein_coding MGP_129S1SvImJ_T0063300.1 MGP_129S1SvImJ_G0027794.1 mouse_genomes_project 3 110952073 111185314 + Vav3 protein_coding retained_intron MGP_129S1SvImJ_T0063301.1 MGP_129S1SvImJ_G0027794.1 mouse_genomes_project 3 110952496 111065205 + Vav3 protein_coding processed_transcript MGP_129S1SvImJ_T0063302.1 MGP_129S1SvImJ_G0027794.1 mouse_genomes_project 3 111116009 111124918 + Vav3 protein_coding processed_transcript MGP_129S1SvImJ_T0063303.1 MGP_129S1SvImJ_G0027794.1 mouse_genomes_project 3 111195668 111307347 + MGP_129S1SvImJ_P0063303 Vav3 protein_coding protein_coding MGP_129S1SvImJ_T0063304.1 MGP_129S1SvImJ_G0027794.1 mouse_genomes_project 3 111269897 111304552 + Vav3 protein_coding processed_transcript MGP_129S1SvImJ_T0101081.1 MGP_129S1SvImJ_G0039148.1 mouse_genomes_project 3 157879372 157879452 - Snord45c snoRNA snoRNA MGP_129S1SvImJ_T0014379.1 MGP_129S1SvImJ_G0012468.1 mouse_genomes_project 3 150746667 150747116 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001365.1 MGP_129S1SvImJ_G0001288.1 mouse_genomes_project 3 133272368 133278507 + TEC TEC MGP_129S1SvImJ_T0101050.1 MGP_129S1SvImJ_G0039117.1 mouse_genomes_project 3 100175822 100175951 - Gm22341 snoRNA snoRNA MGP_129S1SvImJ_T0060081.1 MGP_129S1SvImJ_G0027072.1 mouse_genomes_project 3 11591971 11626458 + MGP_129S1SvImJ_P0060081 Slc7a12 protein_coding protein_coding MGP_129S1SvImJ_T0060082.1 MGP_129S1SvImJ_G0027072.1 mouse_genomes_project 3 11591974 11626352 + MGP_129S1SvImJ_P0060082 Slc7a12 protein_coding protein_coding MGP_129S1SvImJ_T0060083.1 MGP_129S1SvImJ_G0027072.1 mouse_genomes_project 3 11592047 11626352 + MGP_129S1SvImJ_P0060083 Slc7a12 protein_coding protein_coding MGP_129S1SvImJ_T0061881.1 MGP_129S1SvImJ_G0027438.1 mouse_genomes_project 3 89630145 89633015 - MGP_129S1SvImJ_P0061881 Cks1b protein_coding protein_coding MGP_129S1SvImJ_T0061882.1 MGP_129S1SvImJ_G0027438.1 mouse_genomes_project 3 89630230 89632649 - MGP_129S1SvImJ_P0061882 Cks1b protein_coding protein_coding MGP_129S1SvImJ_T0061883.1 MGP_129S1SvImJ_G0027438.1 mouse_genomes_project 3 89630517 89632851 - MGP_129S1SvImJ_P0061883 Cks1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063821.1 MGP_129S1SvImJ_G0027890.1 mouse_genomes_project 3 134825637 134924768 + MGP_129S1SvImJ_P0063821 Dkk2 protein_coding protein_coding MGP_129S1SvImJ_T0064130.1 MGP_129S1SvImJ_G0027951.1 mouse_genomes_project 3 147881870 147908897 + protein_coding processed_transcript MGP_129S1SvImJ_T0064131.1 MGP_129S1SvImJ_G0027951.1 mouse_genomes_project 3 147881992 147909320 + MGP_129S1SvImJ_P0064131 protein_coding protein_coding MGP_129S1SvImJ_T0064132.1 MGP_129S1SvImJ_G0027951.1 mouse_genomes_project 3 147882259 147909301 + MGP_129S1SvImJ_P0064132 protein_coding protein_coding MGP_129S1SvImJ_T0064133.1 MGP_129S1SvImJ_G0027951.1 mouse_genomes_project 3 147882280 147884979 + protein_coding retained_intron MGP_129S1SvImJ_T0064134.1 MGP_129S1SvImJ_G0027951.1 mouse_genomes_project 3 147889218 147907072 + MGP_129S1SvImJ_P0064134 protein_coding protein_coding MGP_129S1SvImJ_T0064135.1 MGP_129S1SvImJ_G0027951.1 mouse_genomes_project 3 147902076 147903242 + protein_coding retained_intron MGP_129S1SvImJ_T0007665.1 MGP_129S1SvImJ_G0006272.1 mouse_genomes_project 3 108560072 108568504 + A930002I21Rik lincRNA lincRNA MGP_129S1SvImJ_T0007666.1 MGP_129S1SvImJ_G0006272.1 mouse_genomes_project 3 108560074 108567323 + A930002I21Rik lincRNA lincRNA MGP_129S1SvImJ_T0064104.1 MGP_129S1SvImJ_G0027947.1 mouse_genomes_project 3 145977034 145996422 + MGP_129S1SvImJ_P0064104 Gtf2b protein_coding protein_coding MGP_129S1SvImJ_T0064105.1 MGP_129S1SvImJ_G0027947.1 mouse_genomes_project 3 145977212 145980404 + Gtf2b protein_coding retained_intron MGP_129S1SvImJ_T0101046.1 MGP_129S1SvImJ_G0039113.1 mouse_genomes_project 3 90272006 90272142 - Gm24608 snoRNA snoRNA MGP_129S1SvImJ_T0060960.1 MGP_129S1SvImJ_G0027241.1 mouse_genomes_project 3 57874191 57970301 + MGP_129S1SvImJ_P0060960 Med12l protein_coding protein_coding MGP_129S1SvImJ_T0060961.1 MGP_129S1SvImJ_G0027241.1 mouse_genomes_project 3 57874853 58190485 + MGP_129S1SvImJ_P0060961 Med12l protein_coding protein_coding MGP_129S1SvImJ_T0060962.1 MGP_129S1SvImJ_G0027241.1 mouse_genomes_project 3 57875344 58190213 + MGP_129S1SvImJ_P0060962 Med12l protein_coding protein_coding MGP_129S1SvImJ_T0060963.1 MGP_129S1SvImJ_G0027241.1 mouse_genomes_project 3 57875344 58190213 + MGP_129S1SvImJ_P0060963 Med12l protein_coding protein_coding MGP_129S1SvImJ_T0060964.1 MGP_129S1SvImJ_G0027241.1 mouse_genomes_project 3 57875344 57969201 + MGP_129S1SvImJ_P0060964 Med12l protein_coding protein_coding MGP_129S1SvImJ_T0060984.1 MGP_129S1SvImJ_G0027241.1 mouse_genomes_project 3 58136387 58187704 + MGP_129S1SvImJ_P0060984 Med12l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0010518.1 MGP_129S1SvImJ_G0008634.1 mouse_genomes_project 3 27087764 27087872 + Mir21b miRNA miRNA MGP_129S1SvImJ_T0099744.1 MGP_129S1SvImJ_G0037811.1 mouse_genomes_project 3 64898520 64898627 - Gm25755 snRNA snRNA MGP_129S1SvImJ_T0062118.1 MGP_129S1SvImJ_G0027492.1 mouse_genomes_project 3 92829893 92831507 + MGP_129S1SvImJ_P0062118 Sprr2h protein_coding protein_coding MGP_129S1SvImJ_T0062119.1 MGP_129S1SvImJ_G0027492.1 mouse_genomes_project 3 92829908 92831282 + MGP_129S1SvImJ_P0062119 Sprr2h protein_coding protein_coding MGP_129S1SvImJ_T0102505.1 MGP_129S1SvImJ_G0040339.1 mouse_genomes_project 3 109556425 109558187 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0062862.1 MGP_129S1SvImJ_G0027691.1 mouse_genomes_project 3 104347446 104417459 + MGP_129S1SvImJ_P0062862 Dennd2c protein_coding protein_coding MGP_129S1SvImJ_T0062863.1 MGP_129S1SvImJ_G0027691.1 mouse_genomes_project 3 104347502 104405177 + Dennd2c protein_coding retained_intron MGP_129S1SvImJ_T0062864.1 MGP_129S1SvImJ_G0027691.1 mouse_genomes_project 3 104376671 104417428 + MGP_129S1SvImJ_P0062864 Dennd2c protein_coding protein_coding MGP_129S1SvImJ_T0062865.1 MGP_129S1SvImJ_G0027691.1 mouse_genomes_project 3 104388368 104416354 + Dennd2c protein_coding processed_transcript MGP_129S1SvImJ_T0062866.1 MGP_129S1SvImJ_G0027691.1 mouse_genomes_project 3 104388882 104417421 + Dennd2c protein_coding retained_intron MGP_129S1SvImJ_T0062867.1 MGP_129S1SvImJ_G0027691.1 mouse_genomes_project 3 104397076 104406349 + Dennd2c protein_coding retained_intron MGP_129S1SvImJ_T0102453.1 MGP_129S1SvImJ_G0040287.1 mouse_genomes_project 3 11463187 11478645 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0062151.1 MGP_129S1SvImJ_G0027521.1 mouse_genomes_project 3 93331055 93332913 - MGP_129S1SvImJ_P0062151 2310050C09Rik protein_coding protein_coding MGP_129S1SvImJ_T0001161.1 MGP_129S1SvImJ_G0001087.1 mouse_genomes_project 3 31035848 31037314 - TEC TEC MGP_129S1SvImJ_T0014287.1 MGP_129S1SvImJ_G0012376.1 mouse_genomes_project 3 119072431 119073115 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060801.1 MGP_129S1SvImJ_G0027208.1 mouse_genomes_project 3 52113974 52264280 - MGP_129S1SvImJ_P0060801 Frem2 protein_coding protein_coding MGP_129S1SvImJ_T0060802.1 MGP_129S1SvImJ_G0027208.1 mouse_genomes_project 3 52116993 52148218 - Frem2 protein_coding processed_transcript MGP_129S1SvImJ_T0060803.1 MGP_129S1SvImJ_G0027208.1 mouse_genomes_project 3 52117097 52125425 - Frem2 protein_coding retained_intron MGP_129S1SvImJ_T0060804.1 MGP_129S1SvImJ_G0027208.1 mouse_genomes_project 3 52254627 52259155 - Frem2 protein_coding retained_intron MGP_129S1SvImJ_T0063807.1 MGP_129S1SvImJ_G0027886.1 mouse_genomes_project 3 134029429 134068092 - MGP_129S1SvImJ_P0063807 Hadh protein_coding protein_coding MGP_129S1SvImJ_T0063808.1 MGP_129S1SvImJ_G0027886.1 mouse_genomes_project 3 134041109 134068015 - Hadh protein_coding retained_intron MGP_129S1SvImJ_T0062092.1 MGP_129S1SvImJ_G0027475.1 mouse_genomes_project 3 90935284 90937545 + MGP_129S1SvImJ_P0062092 S100a4 protein_coding protein_coding MGP_129S1SvImJ_T0062093.1 MGP_129S1SvImJ_G0027475.1 mouse_genomes_project 3 90936410 90937333 + MGP_129S1SvImJ_P0062093 S100a4 protein_coding protein_coding MGP_129S1SvImJ_T0014059.1 MGP_129S1SvImJ_G0012148.1 mouse_genomes_project 3 51942121 51942859 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061630.1 MGP_129S1SvImJ_G0027398.1 mouse_genomes_project 3 88645367 88649828 - Lmna protein_coding retained_intron MGP_129S1SvImJ_T0061631.1 MGP_129S1SvImJ_G0027398.1 mouse_genomes_project 3 88646368 88670130 - MGP_129S1SvImJ_P0061631 Lmna protein_coding protein_coding MGP_129S1SvImJ_T0061632.1 MGP_129S1SvImJ_G0027398.1 mouse_genomes_project 3 88647066 88670132 - Lmna protein_coding processed_transcript MGP_129S1SvImJ_T0061633.1 MGP_129S1SvImJ_G0027398.1 mouse_genomes_project 3 88647297 88648085 - Lmna protein_coding retained_intron MGP_129S1SvImJ_T0061634.1 MGP_129S1SvImJ_G0027398.1 mouse_genomes_project 3 88648425 88670102 - MGP_129S1SvImJ_P0061634 Lmna protein_coding protein_coding MGP_129S1SvImJ_T0061635.1 MGP_129S1SvImJ_G0027398.1 mouse_genomes_project 3 88648426 88660131 - MGP_129S1SvImJ_P0061635 Lmna protein_coding protein_coding MGP_129S1SvImJ_T0061636.1 MGP_129S1SvImJ_G0027398.1 mouse_genomes_project 3 88669547 88676758 - MGP_129S1SvImJ_P0061636 Lmna protein_coding protein_coding MGP_129S1SvImJ_T0098884.1 MGP_129S1SvImJ_G0036962.1 mouse_genomes_project 3 102234035 102236806 - Gm43465 sense_intronic sense_intronic MGP_129S1SvImJ_T0060078.1 MGP_129S1SvImJ_G0027071.1 mouse_genomes_project 3 11027085 11291764 + MGP_129S1SvImJ_P0060078 Ralyl protein_coding protein_coding MGP_129S1SvImJ_T0060079.1 MGP_129S1SvImJ_G0027071.1 mouse_genomes_project 3 11027096 11292620 + MGP_129S1SvImJ_P0060079 Ralyl protein_coding protein_coding MGP_129S1SvImJ_T0060080.1 MGP_129S1SvImJ_G0027071.1 mouse_genomes_project 3 11027103 11292927 + MGP_129S1SvImJ_P0060080 Ralyl protein_coding protein_coding MGP_129S1SvImJ_T0014032.1 MGP_129S1SvImJ_G0012121.1 mouse_genomes_project 3 42595906 42596315 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102494.1 MGP_129S1SvImJ_G0040328.1 mouse_genomes_project 3 95246163 95289888 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0061611.1 MGP_129S1SvImJ_G0027396.1 mouse_genomes_project 3 88566881 88583180 - MGP_129S1SvImJ_P0061611 Slc25a44 protein_coding protein_coding MGP_129S1SvImJ_T0061612.1 MGP_129S1SvImJ_G0027396.1 mouse_genomes_project 3 88566881 88583179 - MGP_129S1SvImJ_P0061612 Slc25a44 protein_coding protein_coding MGP_129S1SvImJ_T0061613.1 MGP_129S1SvImJ_G0027396.1 mouse_genomes_project 3 88566882 88583211 - MGP_129S1SvImJ_P0061613 Slc25a44 protein_coding protein_coding MGP_129S1SvImJ_T0061614.1 MGP_129S1SvImJ_G0027396.1 mouse_genomes_project 3 88566882 88583184 - MGP_129S1SvImJ_P0061614 Slc25a44 protein_coding protein_coding MGP_129S1SvImJ_T0007774.1 MGP_129S1SvImJ_G0006362.1 mouse_genomes_project 3 152942777 152984267 + Gm42649 lincRNA lincRNA MGP_129S1SvImJ_T0007776.1 MGP_129S1SvImJ_G0006362.1 mouse_genomes_project 3 152973494 152975754 + Gm42649 lincRNA lincRNA MGP_129S1SvImJ_T0063929.1 MGP_129S1SvImJ_G0027909.1 mouse_genomes_project 3 138493486 138607218 - MGP_129S1SvImJ_P0063929 Nfkb1 protein_coding protein_coding MGP_129S1SvImJ_T0063930.1 MGP_129S1SvImJ_G0027909.1 mouse_genomes_project 3 138493488 138517182 - MGP_129S1SvImJ_P0063930 Nfkb1 protein_coding protein_coding MGP_129S1SvImJ_T0063931.1 MGP_129S1SvImJ_G0027909.1 mouse_genomes_project 3 138493576 138512759 - MGP_129S1SvImJ_P0063931 Nfkb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063932.1 MGP_129S1SvImJ_G0027909.1 mouse_genomes_project 3 138493713 138517395 - Nfkb1 protein_coding retained_intron MGP_129S1SvImJ_T0063933.1 MGP_129S1SvImJ_G0027909.1 mouse_genomes_project 3 138494110 138582017 - MGP_129S1SvImJ_P0063933 Nfkb1 protein_coding protein_coding MGP_129S1SvImJ_T0063934.1 MGP_129S1SvImJ_G0027909.1 mouse_genomes_project 3 138494113 138583557 - MGP_129S1SvImJ_P0063934 Nfkb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063935.1 MGP_129S1SvImJ_G0027909.1 mouse_genomes_project 3 138499759 138503428 - Nfkb1 protein_coding processed_transcript MGP_129S1SvImJ_T0063936.1 MGP_129S1SvImJ_G0027909.1 mouse_genomes_project 3 138510821 138512822 - Nfkb1 protein_coding retained_intron MGP_129S1SvImJ_T0063937.1 MGP_129S1SvImJ_G0027909.1 mouse_genomes_project 3 138519499 138607219 - Nfkb1 protein_coding retained_intron MGP_129S1SvImJ_T0063938.1 MGP_129S1SvImJ_G0027909.1 mouse_genomes_project 3 138528322 138532435 - Nfkb1 protein_coding retained_intron MGP_129S1SvImJ_T0014130.1 MGP_129S1SvImJ_G0012219.1 mouse_genomes_project 3 71250696 71250855 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014178.1 MGP_129S1SvImJ_G0012267.1 mouse_genomes_project 3 91051875 91052609 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014316.1 MGP_129S1SvImJ_G0012405.1 mouse_genomes_project 3 130838958 130839392 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014061.1 MGP_129S1SvImJ_G0012150.1 mouse_genomes_project 3 52273529 52273995 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063046.1 MGP_129S1SvImJ_G0027733.1 mouse_genomes_project 3 107948478 107954650 + Dennd2d protein_coding processed_transcript MGP_129S1SvImJ_T0063047.1 MGP_129S1SvImJ_G0027733.1 mouse_genomes_project 3 107948504 107969067 + MGP_129S1SvImJ_P0063047 Dennd2d protein_coding protein_coding MGP_129S1SvImJ_T0063048.1 MGP_129S1SvImJ_G0027733.1 mouse_genomes_project 3 107948523 107954668 + MGP_129S1SvImJ_P0063048 Dennd2d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063049.1 MGP_129S1SvImJ_G0027733.1 mouse_genomes_project 3 107952112 107967079 + MGP_129S1SvImJ_P0063049 Dennd2d protein_coding protein_coding MGP_129S1SvImJ_T0063050.1 MGP_129S1SvImJ_G0027733.1 mouse_genomes_project 3 107953480 107954704 + Dennd2d protein_coding retained_intron MGP_129S1SvImJ_T0063051.1 MGP_129S1SvImJ_G0027733.1 mouse_genomes_project 3 107959235 107961360 + Dennd2d protein_coding retained_intron MGP_129S1SvImJ_T0061524.1 MGP_129S1SvImJ_G0027375.1 mouse_genomes_project 3 88061644 88072004 + MGP_129S1SvImJ_P0061524 Isg20l2 protein_coding protein_coding MGP_129S1SvImJ_T0001179.1 MGP_129S1SvImJ_G0001105.1 mouse_genomes_project 3 35714696 35715963 + TEC TEC MGP_129S1SvImJ_T0001291.1 MGP_129S1SvImJ_G0001215.1 mouse_genomes_project 3 98179201 98183880 + TEC TEC MGP_129S1SvImJ_T0060369.1 MGP_129S1SvImJ_G0027132.1 mouse_genomes_project 3 28678016 28693270 + MGP_129S1SvImJ_P0060369 Cldn11 protein_coding protein_coding MGP_129S1SvImJ_T0061044.1 MGP_129S1SvImJ_G0027262.1 mouse_genomes_project 3 62731426 62889861 - MGP_129S1SvImJ_P0061044 Plch1 protein_coding protein_coding MGP_129S1SvImJ_T0061045.1 MGP_129S1SvImJ_G0027262.1 mouse_genomes_project 3 62731426 62889789 - MGP_129S1SvImJ_P0061045 Plch1 protein_coding protein_coding MGP_129S1SvImJ_T0061046.1 MGP_129S1SvImJ_G0027262.1 mouse_genomes_project 3 62731429 62737547 - Plch1 protein_coding retained_intron MGP_129S1SvImJ_T0061047.1 MGP_129S1SvImJ_G0027262.1 mouse_genomes_project 3 62731429 62777284 - Plch1 protein_coding retained_intron MGP_129S1SvImJ_T0061048.1 MGP_129S1SvImJ_G0027262.1 mouse_genomes_project 3 62731429 62890007 - MGP_129S1SvImJ_P0061048 Plch1 protein_coding protein_coding MGP_129S1SvImJ_T0061049.1 MGP_129S1SvImJ_G0027262.1 mouse_genomes_project 3 62731429 62890033 - MGP_129S1SvImJ_P0061049 Plch1 protein_coding protein_coding MGP_129S1SvImJ_T0061050.1 MGP_129S1SvImJ_G0027262.1 mouse_genomes_project 3 62731429 62889741 - MGP_129S1SvImJ_P0061050 Plch1 protein_coding protein_coding MGP_129S1SvImJ_T0061051.1 MGP_129S1SvImJ_G0027262.1 mouse_genomes_project 3 62731430 62889741 - MGP_129S1SvImJ_P0061051 Plch1 protein_coding protein_coding MGP_129S1SvImJ_T0061052.1 MGP_129S1SvImJ_G0027262.1 mouse_genomes_project 3 62731923 62942727 - MGP_129S1SvImJ_P0061052 Plch1 protein_coding protein_coding MGP_129S1SvImJ_T0061053.1 MGP_129S1SvImJ_G0027262.1 mouse_genomes_project 3 62734125 62737236 - MGP_129S1SvImJ_P0061053 Plch1 protein_coding protein_coding MGP_129S1SvImJ_T0061054.1 MGP_129S1SvImJ_G0027262.1 mouse_genomes_project 3 62737008 62890109 - MGP_129S1SvImJ_P0061054 Plch1 protein_coding protein_coding MGP_129S1SvImJ_T0061055.1 MGP_129S1SvImJ_G0027262.1 mouse_genomes_project 3 62819731 62942697 - MGP_129S1SvImJ_P0061055 Plch1 protein_coding protein_coding MGP_129S1SvImJ_T0061056.1 MGP_129S1SvImJ_G0027262.1 mouse_genomes_project 3 62911161 62942628 - MGP_129S1SvImJ_P0061056 Plch1 protein_coding protein_coding MGP_129S1SvImJ_T0064058.1 MGP_129S1SvImJ_G0027937.1 mouse_genomes_project 3 144360165 144362511 - MGP_129S1SvImJ_P0064058 Pdha2 protein_coding protein_coding MGP_129S1SvImJ_T0064457.1 MGP_129S1SvImJ_G0028005.1 mouse_genomes_project 3 158678961 158789360 + MGP_129S1SvImJ_P0064457 protein_coding protein_coding MGP_129S1SvImJ_T0064458.1 MGP_129S1SvImJ_G0028005.1 mouse_genomes_project 3 158729200 158773546 + MGP_129S1SvImJ_P0064458 protein_coding protein_coding MGP_129S1SvImJ_T0064459.1 MGP_129S1SvImJ_G0028005.1 mouse_genomes_project 3 158729957 158735247 + protein_coding processed_transcript MGP_129S1SvImJ_T0064460.1 MGP_129S1SvImJ_G0028005.1 mouse_genomes_project 3 158788863 158795455 + MGP_129S1SvImJ_P0064460 protein_coding protein_coding MGP_129S1SvImJ_T0018012.1 MGP_129S1SvImJ_G0015516.1 mouse_genomes_project 3 107348505 107373599 + Gm42890 processed_transcript retained_intron MGP_129S1SvImJ_T0018013.1 MGP_129S1SvImJ_G0015516.1 mouse_genomes_project 3 107355117 107365404 + Gm42890 processed_transcript retained_intron MGP_129S1SvImJ_T0064211.1 MGP_129S1SvImJ_G0027970.1 mouse_genomes_project 3 149913927 149955729 + MGP_129S1SvImJ_P0064211 Ssx2ip protein_coding protein_coding MGP_129S1SvImJ_T0064212.1 MGP_129S1SvImJ_G0027970.1 mouse_genomes_project 3 149913927 149955367 + MGP_129S1SvImJ_P0064212 Ssx2ip protein_coding protein_coding MGP_129S1SvImJ_T0064213.1 MGP_129S1SvImJ_G0027970.1 mouse_genomes_project 3 149913949 149955718 + MGP_129S1SvImJ_P0064213 Ssx2ip protein_coding protein_coding MGP_129S1SvImJ_T0064214.1 MGP_129S1SvImJ_G0027970.1 mouse_genomes_project 3 149913971 149954491 + MGP_129S1SvImJ_P0064214 Ssx2ip protein_coding protein_coding MGP_129S1SvImJ_T0064215.1 MGP_129S1SvImJ_G0027970.1 mouse_genomes_project 3 149913976 149929924 + MGP_129S1SvImJ_P0064215 Ssx2ip protein_coding protein_coding MGP_129S1SvImJ_T0064216.1 MGP_129S1SvImJ_G0027970.1 mouse_genomes_project 3 149914263 149930884 + MGP_129S1SvImJ_P0064216 Ssx2ip protein_coding protein_coding MGP_129S1SvImJ_T0064217.1 MGP_129S1SvImJ_G0027970.1 mouse_genomes_project 3 149942720 149948164 + Ssx2ip protein_coding retained_intron MGP_129S1SvImJ_T0014064.1 MGP_129S1SvImJ_G0012153.1 mouse_genomes_project 3 53323294 53324982 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062699.1 MGP_129S1SvImJ_G0027651.1 mouse_genomes_project 3 99313480 99348869 - MGP_129S1SvImJ_P0062699 protein_coding protein_coding MGP_129S1SvImJ_T0062700.1 MGP_129S1SvImJ_G0027651.1 mouse_genomes_project 3 99324192 99341577 - protein_coding retained_intron MGP_129S1SvImJ_T0062701.1 MGP_129S1SvImJ_G0027651.1 mouse_genomes_project 3 99324727 99332897 - protein_coding retained_intron MGP_129S1SvImJ_T0062702.1 MGP_129S1SvImJ_G0027651.1 mouse_genomes_project 3 99324834 99345548 - MGP_129S1SvImJ_P0062702 protein_coding protein_coding MGP_129S1SvImJ_T0010577.1 MGP_129S1SvImJ_G0008693.1 mouse_genomes_project 3 145838923 145839010 - Mir6381 miRNA miRNA MGP_129S1SvImJ_T0014107.1 MGP_129S1SvImJ_G0012196.1 mouse_genomes_project 3 65333166 65333319 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014039.1 MGP_129S1SvImJ_G0012128.1 mouse_genomes_project 3 45516396 45516862 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061102.1 MGP_129S1SvImJ_G0027276.1 mouse_genomes_project 3 65365384 65371280 + MGP_129S1SvImJ_P0061102 Ptx3 protein_coding protein_coding MGP_129S1SvImJ_T0061103.1 MGP_129S1SvImJ_G0027276.1 mouse_genomes_project 3 65365719 65366905 + Ptx3 protein_coding retained_intron MGP_129S1SvImJ_T0011549.1 MGP_129S1SvImJ_G0009665.1 mouse_genomes_project 3 6291039 6291350 + Gm22604 misc_RNA misc_RNA MGP_129S1SvImJ_T0063974.1 MGP_129S1SvImJ_G0027918.1 mouse_genomes_project 3 140888897 140946709 + MGP_129S1SvImJ_P0063974 Dnajb14 protein_coding protein_coding MGP_129S1SvImJ_T0063975.1 MGP_129S1SvImJ_G0027918.1 mouse_genomes_project 3 140889109 140923897 + Dnajb14 protein_coding retained_intron MGP_129S1SvImJ_T0063976.1 MGP_129S1SvImJ_G0027918.1 mouse_genomes_project 3 140889403 140930098 + MGP_129S1SvImJ_P0063976 Dnajb14 protein_coding protein_coding MGP_129S1SvImJ_T0063977.1 MGP_129S1SvImJ_G0027918.1 mouse_genomes_project 3 140933070 140937897 + Dnajb14 protein_coding retained_intron MGP_129S1SvImJ_T0010535.1 MGP_129S1SvImJ_G0008651.1 mouse_genomes_project 3 81903480 81903543 - Mir7010 miRNA miRNA MGP_129S1SvImJ_T0007566.1 MGP_129S1SvImJ_G0006196.1 mouse_genomes_project 3 56957213 56979590 - 1700007F19Rik lincRNA lincRNA MGP_129S1SvImJ_T0001236.1 MGP_129S1SvImJ_G0001160.1 mouse_genomes_project 3 54217656 54221049 + TEC TEC MGP_129S1SvImJ_T0014214.1 MGP_129S1SvImJ_G0012303.1 mouse_genomes_project 3 99178683 99179822 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007490.1 MGP_129S1SvImJ_G0006140.1 mouse_genomes_project 3 20664375 20722737 + 4930412E21Rik lincRNA lincRNA MGP_129S1SvImJ_T0061064.1 MGP_129S1SvImJ_G0027266.1 mouse_genomes_project 3 63140126 63164588 + MGP_129S1SvImJ_P0061064 Vmn2r1 protein_coding protein_coding MGP_129S1SvImJ_T0004343.1 MGP_129S1SvImJ_G0003809.1 mouse_genomes_project 3 106332007 106343342 + Gm42956 antisense antisense MGP_129S1SvImJ_T0101010.1 MGP_129S1SvImJ_G0039077.1 mouse_genomes_project 3 14417456 14417600 - Gm24963 snoRNA snoRNA MGP_129S1SvImJ_T0061637.1 MGP_129S1SvImJ_G0027399.1 mouse_genomes_project 3 88699246 88709695 + MGP_129S1SvImJ_P0061637 Mex3a protein_coding protein_coding MGP_129S1SvImJ_T0010516.1 MGP_129S1SvImJ_G0008632.1 mouse_genomes_project 3 25808572 25808648 + Mir466q miRNA miRNA MGP_129S1SvImJ_T0013997.1 MGP_129S1SvImJ_G0012086.1 mouse_genomes_project 3 31724367 31728102 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004405.1 MGP_129S1SvImJ_G0003848.1 mouse_genomes_project 3 141257738 141287920 - 0610031O16Rik antisense antisense MGP_129S1SvImJ_T0004406.1 MGP_129S1SvImJ_G0003848.1 mouse_genomes_project 3 141265985 141287920 - 0610031O16Rik antisense antisense MGP_129S1SvImJ_T0004407.1 MGP_129S1SvImJ_G0003848.1 mouse_genomes_project 3 141274744 141287936 - 0610031O16Rik antisense antisense MGP_129S1SvImJ_T0004408.1 MGP_129S1SvImJ_G0003848.1 mouse_genomes_project 3 141277251 141288662 - 0610031O16Rik antisense antisense MGP_129S1SvImJ_T0001299.1 MGP_129S1SvImJ_G0001223.1 mouse_genomes_project 3 107944356 107946942 + TEC TEC MGP_129S1SvImJ_T0014227.1 MGP_129S1SvImJ_G0012316.1 mouse_genomes_project 3 102094230 102094729 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061512.1 MGP_129S1SvImJ_G0027374.1 mouse_genomes_project 3 88054149 88061458 - Rrnad1 protein_coding retained_intron MGP_129S1SvImJ_T0061513.1 MGP_129S1SvImJ_G0027374.1 mouse_genomes_project 3 88054149 88061458 - MGP_129S1SvImJ_P0061513 Rrnad1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061514.1 MGP_129S1SvImJ_G0027374.1 mouse_genomes_project 3 88054453 88061475 - MGP_129S1SvImJ_P0061514 Rrnad1 protein_coding protein_coding MGP_129S1SvImJ_T0061515.1 MGP_129S1SvImJ_G0027374.1 mouse_genomes_project 3 88054864 88060692 - Rrnad1 protein_coding retained_intron MGP_129S1SvImJ_T0061516.1 MGP_129S1SvImJ_G0027374.1 mouse_genomes_project 3 88055206 88059589 - MGP_129S1SvImJ_P0061516 Rrnad1 protein_coding protein_coding MGP_129S1SvImJ_T0061517.1 MGP_129S1SvImJ_G0027374.1 mouse_genomes_project 3 88055207 88056824 - Rrnad1 protein_coding processed_transcript MGP_129S1SvImJ_T0061518.1 MGP_129S1SvImJ_G0027374.1 mouse_genomes_project 3 88055211 88061475 - Rrnad1 protein_coding retained_intron MGP_129S1SvImJ_T0061519.1 MGP_129S1SvImJ_G0027374.1 mouse_genomes_project 3 88055211 88062048 - Rrnad1 protein_coding retained_intron MGP_129S1SvImJ_T0061520.1 MGP_129S1SvImJ_G0027374.1 mouse_genomes_project 3 88055331 88061914 - MGP_129S1SvImJ_P0061520 Rrnad1 protein_coding protein_coding MGP_129S1SvImJ_T0061521.1 MGP_129S1SvImJ_G0027374.1 mouse_genomes_project 3 88056601 88058423 - Rrnad1 protein_coding retained_intron MGP_129S1SvImJ_T0061522.1 MGP_129S1SvImJ_G0027374.1 mouse_genomes_project 3 88056774 88059039 - Rrnad1 protein_coding processed_transcript MGP_129S1SvImJ_T0061523.1 MGP_129S1SvImJ_G0027374.1 mouse_genomes_project 3 88056804 88061469 - MGP_129S1SvImJ_P0061523 Rrnad1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0010575.1 MGP_129S1SvImJ_G0008691.1 mouse_genomes_project 3 141578256 141578321 + Mir1956 miRNA miRNA MGP_129S1SvImJ_T0011567.1 MGP_129S1SvImJ_G0009683.1 mouse_genomes_project 3 101862025 101862287 - Gm23465 misc_RNA misc_RNA MGP_129S1SvImJ_T0004270.1 MGP_129S1SvImJ_G0003759.1 mouse_genomes_project 3 64235184 64412921 - antisense antisense MGP_129S1SvImJ_T0004271.1 MGP_129S1SvImJ_G0003759.1 mouse_genomes_project 3 64403361 64412893 - antisense antisense MGP_129S1SvImJ_T0014187.1 MGP_129S1SvImJ_G0012276.1 mouse_genomes_project 3 93414770 93415162 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007449.1 MGP_129S1SvImJ_G0006113.1 mouse_genomes_project 3 1842579 1847076 + Gm17308 lincRNA lincRNA MGP_129S1SvImJ_T0061227.1 MGP_129S1SvImJ_G0027308.1 mouse_genomes_project 3 75362085 75446765 - MGP_129S1SvImJ_P0061227 Golim4 protein_coding protein_coding MGP_129S1SvImJ_T0061228.1 MGP_129S1SvImJ_G0027308.1 mouse_genomes_project 3 75363184 75446785 - MGP_129S1SvImJ_P0061228 Golim4 protein_coding protein_coding MGP_129S1SvImJ_T0061229.1 MGP_129S1SvImJ_G0027308.1 mouse_genomes_project 3 75363480 75367056 - Golim4 protein_coding retained_intron MGP_129S1SvImJ_T0061230.1 MGP_129S1SvImJ_G0027308.1 mouse_genomes_project 3 75364660 75446773 - MGP_129S1SvImJ_P0061230 Golim4 protein_coding protein_coding MGP_129S1SvImJ_T0061231.1 MGP_129S1SvImJ_G0027308.1 mouse_genomes_project 3 75374766 75380954 - Golim4 protein_coding retained_intron MGP_129S1SvImJ_T0061232.1 MGP_129S1SvImJ_G0027308.1 mouse_genomes_project 3 75382669 75390266 - MGP_129S1SvImJ_P0061232 Golim4 protein_coding protein_coding MGP_129S1SvImJ_T0061233.1 MGP_129S1SvImJ_G0027308.1 mouse_genomes_project 3 75387047 75446744 - Golim4 protein_coding retained_intron MGP_129S1SvImJ_T0061234.1 MGP_129S1SvImJ_G0027308.1 mouse_genomes_project 3 75397662 75446486 - Golim4 protein_coding retained_intron MGP_129S1SvImJ_T0061235.1 MGP_129S1SvImJ_G0027308.1 mouse_genomes_project 3 75444951 75446767 - Golim4 protein_coding retained_intron MGP_129S1SvImJ_T0099720.1 MGP_129S1SvImJ_G0037787.1 mouse_genomes_project 3 14992099 14992226 - Gm23441 snRNA snRNA MGP_129S1SvImJ_T0063542.1 MGP_129S1SvImJ_G0027840.1 mouse_genomes_project 3 124814947 124840443 - MGP_129S1SvImJ_P0063542 Fnbp1l protein_coding protein_coding MGP_129S1SvImJ_T0063543.1 MGP_129S1SvImJ_G0027840.1 mouse_genomes_project 3 124814953 124897627 - MGP_129S1SvImJ_P0063543 Fnbp1l protein_coding protein_coding MGP_129S1SvImJ_T0063544.1 MGP_129S1SvImJ_G0027840.1 mouse_genomes_project 3 124818329 124897465 - MGP_129S1SvImJ_P0063544 Fnbp1l protein_coding protein_coding MGP_129S1SvImJ_T0063545.1 MGP_129S1SvImJ_G0027840.1 mouse_genomes_project 3 124824294 124831338 - Fnbp1l protein_coding retained_intron MGP_129S1SvImJ_T0063546.1 MGP_129S1SvImJ_G0027840.1 mouse_genomes_project 3 124834156 124835492 - Fnbp1l protein_coding retained_intron MGP_129S1SvImJ_T0102456.1 MGP_129S1SvImJ_G0040290.1 mouse_genomes_project 3 20287648 20290151 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099805.1 MGP_129S1SvImJ_G0037872.1 mouse_genomes_project 3 161534959 161535066 - Gm23379 snRNA snRNA MGP_129S1SvImJ_T0062113.1 MGP_129S1SvImJ_G0027487.1 mouse_genomes_project 3 92558449 92566283 - MGP_129S1SvImJ_P0062113 Lelp1 protein_coding protein_coding MGP_129S1SvImJ_T0014093.1 MGP_129S1SvImJ_G0012182.1 mouse_genomes_project 3 61940587 61941014 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062032.1 MGP_129S1SvImJ_G0027462.1 mouse_genomes_project 3 90693981 90698681 - Slc27a3 protein_coding retained_intron MGP_129S1SvImJ_T0062033.1 MGP_129S1SvImJ_G0027462.1 mouse_genomes_project 3 90693981 90698670 - MGP_129S1SvImJ_P0062033 Slc27a3 protein_coding protein_coding MGP_129S1SvImJ_T0062034.1 MGP_129S1SvImJ_G0027462.1 mouse_genomes_project 3 90693983 90698407 - MGP_129S1SvImJ_P0062034 Slc27a3 protein_coding protein_coding MGP_129S1SvImJ_T0062035.1 MGP_129S1SvImJ_G0027462.1 mouse_genomes_project 3 90696177 90697724 - Slc27a3 protein_coding retained_intron MGP_129S1SvImJ_T0062036.1 MGP_129S1SvImJ_G0027462.1 mouse_genomes_project 3 90697105 90698373 - Slc27a3 protein_coding processed_transcript MGP_129S1SvImJ_T0062907.1 MGP_129S1SvImJ_G0027699.1 mouse_genomes_project 3 105098172 105112262 + MGP_129S1SvImJ_P0062907 protein_coding protein_coding MGP_129S1SvImJ_T0062909.1 MGP_129S1SvImJ_G0027699.1 mouse_genomes_project 3 105098245 105112067 + MGP_129S1SvImJ_P0062909 protein_coding protein_coding MGP_129S1SvImJ_T0062910.1 MGP_129S1SvImJ_G0027699.1 mouse_genomes_project 3 105098252 105112262 + MGP_129S1SvImJ_P0062910 protein_coding protein_coding MGP_129S1SvImJ_T0062911.1 MGP_129S1SvImJ_G0027699.1 mouse_genomes_project 3 105098280 105112264 + MGP_129S1SvImJ_P0062911 protein_coding protein_coding MGP_129S1SvImJ_T0062912.1 MGP_129S1SvImJ_G0027699.1 mouse_genomes_project 3 105098488 105112000 + MGP_129S1SvImJ_P0062912 protein_coding protein_coding MGP_129S1SvImJ_T0062913.1 MGP_129S1SvImJ_G0027699.1 mouse_genomes_project 3 105098516 105103540 + protein_coding processed_transcript MGP_129S1SvImJ_T0062914.1 MGP_129S1SvImJ_G0027699.1 mouse_genomes_project 3 105103729 105110923 + MGP_129S1SvImJ_P0062914 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0014176.1 MGP_129S1SvImJ_G0012265.1 mouse_genomes_project 3 90057984 90058510 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014222.1 MGP_129S1SvImJ_G0012311.1 mouse_genomes_project 3 100647364 100648019 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004365.1 MGP_129S1SvImJ_G0003817.1 mouse_genomes_project 3 110281654 110285394 + Gm27244 antisense antisense MGP_129S1SvImJ_T0007701.1 MGP_129S1SvImJ_G0006299.1 mouse_genomes_project 3 130441577 130483129 + 9830132P13Rik lincRNA lincRNA MGP_129S1SvImJ_T0062103.1 MGP_129S1SvImJ_G0027480.1 mouse_genomes_project 3 91036332 91039410 - MGP_129S1SvImJ_P0062103 S100a9 protein_coding protein_coding MGP_129S1SvImJ_T0062104.1 MGP_129S1SvImJ_G0027480.1 mouse_genomes_project 3 91036332 91039420 - MGP_129S1SvImJ_P0062104 S100a9 protein_coding protein_coding MGP_129S1SvImJ_T0014161.1 MGP_129S1SvImJ_G0012250.1 mouse_genomes_project 3 85132248 85132909 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001303.1 MGP_129S1SvImJ_G0001227.1 mouse_genomes_project 3 109402201 109404084 + TEC TEC MGP_129S1SvImJ_T0061410.1 MGP_129S1SvImJ_G0027350.1 mouse_genomes_project 3 85888301 85907905 - MGP_129S1SvImJ_P0061410 Glt28d2 protein_coding protein_coding MGP_129S1SvImJ_T0061209.1 MGP_129S1SvImJ_G0027303.1 mouse_genomes_project 3 74504831 74620944 - MGP_129S1SvImJ_P0061209 Zbbx protein_coding protein_coding MGP_129S1SvImJ_T0061210.1 MGP_129S1SvImJ_G0027303.1 mouse_genomes_project 3 74504887 74643890 - MGP_129S1SvImJ_P0061210 Zbbx protein_coding protein_coding MGP_129S1SvImJ_T0061211.1 MGP_129S1SvImJ_G0027303.1 mouse_genomes_project 3 74528254 74620875 - MGP_129S1SvImJ_P0061211 Zbbx protein_coding protein_coding MGP_129S1SvImJ_T0061212.1 MGP_129S1SvImJ_G0027303.1 mouse_genomes_project 3 74545103 74620944 - MGP_129S1SvImJ_P0061212 Zbbx protein_coding protein_coding MGP_129S1SvImJ_T0061213.1 MGP_129S1SvImJ_G0027303.1 mouse_genomes_project 3 74579133 74643855 - MGP_129S1SvImJ_P0061213 Zbbx protein_coding protein_coding MGP_129S1SvImJ_T0001129.1 MGP_129S1SvImJ_G0001055.1 mouse_genomes_project 3 5589142 5592108 - TEC TEC MGP_129S1SvImJ_T0004344.1 MGP_129S1SvImJ_G0003810.1 mouse_genomes_project 3 106804935 106816245 - Kcnd3os antisense antisense MGP_129S1SvImJ_T0004345.1 MGP_129S1SvImJ_G0003810.1 mouse_genomes_project 3 106812707 106817442 - Kcnd3os antisense antisense MGP_129S1SvImJ_T0063590.1 MGP_129S1SvImJ_G0027851.1 mouse_genomes_project 3 125836378 125992843 - MGP_129S1SvImJ_P0063590 Ndst3 protein_coding protein_coding MGP_129S1SvImJ_T0063591.1 MGP_129S1SvImJ_G0027851.1 mouse_genomes_project 3 125836384 126012482 - MGP_129S1SvImJ_P0063591 Ndst3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063592.1 MGP_129S1SvImJ_G0027851.1 mouse_genomes_project 3 125836386 126012482 - MGP_129S1SvImJ_P0063592 Ndst3 protein_coding protein_coding MGP_129S1SvImJ_T0063593.1 MGP_129S1SvImJ_G0027851.1 mouse_genomes_project 3 125836387 125992927 - MGP_129S1SvImJ_P0063593 Ndst3 protein_coding protein_coding MGP_129S1SvImJ_T0063594.1 MGP_129S1SvImJ_G0027851.1 mouse_genomes_project 3 125838777 125940296 - MGP_129S1SvImJ_P0063594 Ndst3 protein_coding protein_coding MGP_129S1SvImJ_T0063595.1 MGP_129S1SvImJ_G0027851.1 mouse_genomes_project 3 125838906 126011909 - MGP_129S1SvImJ_P0063595 Ndst3 protein_coding protein_coding MGP_129S1SvImJ_T0063596.1 MGP_129S1SvImJ_G0027851.1 mouse_genomes_project 3 125864092 125993112 - Ndst3 protein_coding retained_intron MGP_129S1SvImJ_T0063597.1 MGP_129S1SvImJ_G0027851.1 mouse_genomes_project 3 125869826 125873296 - Ndst3 protein_coding retained_intron MGP_129S1SvImJ_T0063598.1 MGP_129S1SvImJ_G0027851.1 mouse_genomes_project 3 125869997 125891419 - Ndst3 protein_coding processed_transcript MGP_129S1SvImJ_T0001315.1 MGP_129S1SvImJ_G0001239.1 mouse_genomes_project 3 120566645 120570771 + TEC TEC MGP_129S1SvImJ_T0060053.1 MGP_129S1SvImJ_G0027063.1 mouse_genomes_project 3 7169880 7174369 - MGP_129S1SvImJ_P0060053 Fabp4 protein_coding protein_coding MGP_129S1SvImJ_T0060054.1 MGP_129S1SvImJ_G0027063.1 mouse_genomes_project 3 7170120 7174351 - Fabp4 protein_coding retained_intron MGP_129S1SvImJ_T0062764.1 MGP_129S1SvImJ_G0027672.1 mouse_genomes_project 3 102135411 102176410 - MGP_129S1SvImJ_P0062764 Cd101 protein_coding protein_coding MGP_129S1SvImJ_T0062765.1 MGP_129S1SvImJ_G0027672.1 mouse_genomes_project 3 102135414 102167483 - MGP_129S1SvImJ_P0062765 Cd101 protein_coding protein_coding MGP_129S1SvImJ_T0098880.1 MGP_129S1SvImJ_G0036958.1 mouse_genomes_project 3 101699853 101705067 - Gm43466 sense_intronic sense_intronic MGP_129S1SvImJ_T0004364.1 MGP_129S1SvImJ_G0003816.1 mouse_genomes_project 3 109823729 109825798 - antisense antisense MGP_129S1SvImJ_T0013940.1 MGP_129S1SvImJ_G0012029.1 mouse_genomes_project 3 9664276 9664853 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001245.1 MGP_129S1SvImJ_G0001169.1 mouse_genomes_project 3 57368061 57369253 + TEC TEC MGP_129S1SvImJ_T0101066.1 MGP_129S1SvImJ_G0039133.1 mouse_genomes_project 3 126842079 126842209 + Gm22900 snoRNA snoRNA MGP_129S1SvImJ_T0004414.1 MGP_129S1SvImJ_G0003854.1 mouse_genomes_project 3 148138266 148143324 + antisense antisense MGP_129S1SvImJ_T0001394.1 MGP_129S1SvImJ_G0001317.1 mouse_genomes_project 3 154860982 154865404 - TEC TEC MGP_129S1SvImJ_T0060001.1 MGP_129S1SvImJ_G0027046.1 mouse_genomes_project 3 2330179 2347924 - MGP_129S1SvImJ_P0060001 Pex2 protein_coding protein_coding MGP_129S1SvImJ_T0060002.1 MGP_129S1SvImJ_G0027046.1 mouse_genomes_project 3 2330179 2347924 - MGP_129S1SvImJ_P0060002 Pex2 protein_coding protein_coding MGP_129S1SvImJ_T0060003.1 MGP_129S1SvImJ_G0027046.1 mouse_genomes_project 3 2330490 2333721 - MGP_129S1SvImJ_P0060003 Pex2 protein_coding protein_coding MGP_129S1SvImJ_T0060004.1 MGP_129S1SvImJ_G0027046.1 mouse_genomes_project 3 2330491 2347919 - MGP_129S1SvImJ_P0060004 Pex2 protein_coding protein_coding MGP_129S1SvImJ_T0060005.1 MGP_129S1SvImJ_G0027046.1 mouse_genomes_project 3 2330491 2348013 - MGP_129S1SvImJ_P0060005 Pex2 protein_coding protein_coding MGP_129S1SvImJ_T0060006.1 MGP_129S1SvImJ_G0027046.1 mouse_genomes_project 3 2330495 2347902 - MGP_129S1SvImJ_P0060006 Pex2 protein_coding protein_coding MGP_129S1SvImJ_T0013946.1 MGP_129S1SvImJ_G0012035.1 mouse_genomes_project 3 10921636 10922993 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014321.1 MGP_129S1SvImJ_G0012410.1 mouse_genomes_project 3 132862208 132862801 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014051.1 MGP_129S1SvImJ_G0012140.1 mouse_genomes_project 3 49071131 49071507 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014188.1 MGP_129S1SvImJ_G0012277.1 mouse_genomes_project 3 93589061 93589193 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062341.1 MGP_129S1SvImJ_G0027573.1 mouse_genomes_project 3 95859997 95864078 + Sema6c protein_coding processed_transcript MGP_129S1SvImJ_T0062342.1 MGP_129S1SvImJ_G0027573.1 mouse_genomes_project 3 95860034 95863963 + Sema6c protein_coding processed_transcript MGP_129S1SvImJ_T0062343.1 MGP_129S1SvImJ_G0027573.1 mouse_genomes_project 3 95860034 95867884 + MGP_129S1SvImJ_P0062343 Sema6c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062344.1 MGP_129S1SvImJ_G0027573.1 mouse_genomes_project 3 95860034 95873190 + MGP_129S1SvImJ_P0062344 Sema6c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062345.1 MGP_129S1SvImJ_G0027573.1 mouse_genomes_project 3 95860041 95864017 + MGP_129S1SvImJ_P0062345 Sema6c protein_coding protein_coding MGP_129S1SvImJ_T0062346.1 MGP_129S1SvImJ_G0027573.1 mouse_genomes_project 3 95860045 95873561 + Sema6c protein_coding retained_intron MGP_129S1SvImJ_T0062347.1 MGP_129S1SvImJ_G0027573.1 mouse_genomes_project 3 95860045 95873561 + MGP_129S1SvImJ_P0062347 Sema6c protein_coding protein_coding MGP_129S1SvImJ_T0062348.1 MGP_129S1SvImJ_G0027573.1 mouse_genomes_project 3 95860045 95873561 + MGP_129S1SvImJ_P0062348 Sema6c protein_coding protein_coding MGP_129S1SvImJ_T0062349.1 MGP_129S1SvImJ_G0027573.1 mouse_genomes_project 3 95860045 95873561 + MGP_129S1SvImJ_P0062349 Sema6c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062350.1 MGP_129S1SvImJ_G0027573.1 mouse_genomes_project 3 95863841 95873399 + MGP_129S1SvImJ_P0062350 Sema6c protein_coding protein_coding MGP_129S1SvImJ_T0062351.1 MGP_129S1SvImJ_G0027573.1 mouse_genomes_project 3 95863841 95873561 + MGP_129S1SvImJ_P0062351 Sema6c protein_coding protein_coding MGP_129S1SvImJ_T0062352.1 MGP_129S1SvImJ_G0027573.1 mouse_genomes_project 3 95863909 95872853 + MGP_129S1SvImJ_P0062352 Sema6c protein_coding protein_coding MGP_129S1SvImJ_T0062353.1 MGP_129S1SvImJ_G0027573.1 mouse_genomes_project 3 95867749 95869677 + Sema6c protein_coding processed_transcript MGP_129S1SvImJ_T0062354.1 MGP_129S1SvImJ_G0027573.1 mouse_genomes_project 3 95869859 95871432 + Sema6c protein_coding retained_intron MGP_129S1SvImJ_T0062355.1 MGP_129S1SvImJ_G0027573.1 mouse_genomes_project 3 95870341 95871513 + Sema6c protein_coding retained_intron MGP_129S1SvImJ_T0001127.1 MGP_129S1SvImJ_G0001054.1 mouse_genomes_project 3 1967596 1969977 + TEC TEC MGP_129S1SvImJ_T0001128.1 MGP_129S1SvImJ_G0001054.1 mouse_genomes_project 3 1969523 1969856 + TEC TEC MGP_129S1SvImJ_T0064293.1 MGP_129S1SvImJ_G0027983.1 mouse_genomes_project 3 155538775 155561087 - MGP_129S1SvImJ_P0064293 Ifi44 protein_coding protein_coding MGP_129S1SvImJ_T0064294.1 MGP_129S1SvImJ_G0027983.1 mouse_genomes_project 3 155540279 155561009 - Ifi44 protein_coding processed_transcript MGP_129S1SvImJ_T0064295.1 MGP_129S1SvImJ_G0027983.1 mouse_genomes_project 3 155556817 155561074 - Ifi44 protein_coding retained_intron MGP_129S1SvImJ_T0064296.1 MGP_129S1SvImJ_G0027983.1 mouse_genomes_project 3 155556918 155561030 - Ifi44 protein_coding processed_transcript MGP_129S1SvImJ_T0060247.1 MGP_129S1SvImJ_G0027111.1 mouse_genomes_project 3 24691630 24698289 + MGP_129S1SvImJ_P0060247 Ghsr protein_coding protein_coding MGP_129S1SvImJ_T0101910.1 MGP_129S1SvImJ_G0039821.1 mouse_genomes_project 3 95293680 95425154 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101911.1 MGP_129S1SvImJ_G0039821.1 mouse_genomes_project 3 95293731 95430050 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0060923.1 MGP_129S1SvImJ_G0027232.1 mouse_genomes_project 3 56526118 56630991 + MGP_129S1SvImJ_P0060923 Rnf13 protein_coding protein_coding MGP_129S1SvImJ_T0060924.1 MGP_129S1SvImJ_G0027232.1 mouse_genomes_project 3 56526119 56574043 + MGP_129S1SvImJ_P0060924 Rnf13 protein_coding protein_coding MGP_129S1SvImJ_T0060925.1 MGP_129S1SvImJ_G0027232.1 mouse_genomes_project 3 56526131 56607944 + Rnf13 protein_coding processed_transcript MGP_129S1SvImJ_T0060926.1 MGP_129S1SvImJ_G0027232.1 mouse_genomes_project 3 56526138 56629648 + Rnf13 protein_coding processed_transcript MGP_129S1SvImJ_T0060927.1 MGP_129S1SvImJ_G0027232.1 mouse_genomes_project 3 56526138 56630993 + MGP_129S1SvImJ_P0060927 Rnf13 protein_coding protein_coding MGP_129S1SvImJ_T0060928.1 MGP_129S1SvImJ_G0027232.1 mouse_genomes_project 3 56526141 56622060 + MGP_129S1SvImJ_P0060928 Rnf13 protein_coding protein_coding MGP_129S1SvImJ_T0060929.1 MGP_129S1SvImJ_G0027232.1 mouse_genomes_project 3 56526169 56630879 + MGP_129S1SvImJ_P0060929 Rnf13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060930.1 MGP_129S1SvImJ_G0027232.1 mouse_genomes_project 3 56526176 56628992 + MGP_129S1SvImJ_P0060930 Rnf13 protein_coding protein_coding MGP_129S1SvImJ_T0060931.1 MGP_129S1SvImJ_G0027232.1 mouse_genomes_project 3 56526176 56562262 + MGP_129S1SvImJ_P0060931 Rnf13 protein_coding protein_coding MGP_129S1SvImJ_T0060932.1 MGP_129S1SvImJ_G0027232.1 mouse_genomes_project 3 56526176 56598426 + MGP_129S1SvImJ_P0060932 Rnf13 protein_coding protein_coding MGP_129S1SvImJ_T0060933.1 MGP_129S1SvImJ_G0027232.1 mouse_genomes_project 3 56596719 56600592 + Rnf13 protein_coding retained_intron MGP_129S1SvImJ_T0004233.1 MGP_129S1SvImJ_G0003731.1 mouse_genomes_project 3 30667794 30733651 + 4930419G24Rik antisense antisense MGP_129S1SvImJ_T0060799.1 MGP_129S1SvImJ_G0027207.1 mouse_genomes_project 3 52087078 52098566 + Stoml3 protein_coding retained_intron MGP_129S1SvImJ_T0060800.1 MGP_129S1SvImJ_G0027207.1 mouse_genomes_project 3 52087152 52108605 + MGP_129S1SvImJ_P0060800 Stoml3 protein_coding protein_coding MGP_129S1SvImJ_T0061100.1 MGP_129S1SvImJ_G0027275.1 mouse_genomes_project 3 65193889 65435015 - MGP_129S1SvImJ_P0061100 Veph1 protein_coding protein_coding MGP_129S1SvImJ_T0061101.1 MGP_129S1SvImJ_G0027275.1 mouse_genomes_project 3 65198073 65276667 - Veph1 protein_coding processed_transcript MGP_129S1SvImJ_T0061104.1 MGP_129S1SvImJ_G0027275.1 mouse_genomes_project 3 65383787 65434926 - Veph1 protein_coding retained_intron MGP_129S1SvImJ_T0063608.1 MGP_129S1SvImJ_G0027855.1 mouse_genomes_project 3 127784949 128131254 + MGP_129S1SvImJ_P0063608 Ndst4 protein_coding protein_coding MGP_129S1SvImJ_T0063609.1 MGP_129S1SvImJ_G0027855.1 mouse_genomes_project 3 127784963 128088099 + Ndst4 protein_coding retained_intron MGP_129S1SvImJ_T0063610.1 MGP_129S1SvImJ_G0027855.1 mouse_genomes_project 3 127950901 128007496 + MGP_129S1SvImJ_P0063610 Ndst4 protein_coding protein_coding MGP_129S1SvImJ_T0063611.1 MGP_129S1SvImJ_G0027855.1 mouse_genomes_project 3 128081288 128130687 + MGP_129S1SvImJ_P0063611 Ndst4 protein_coding protein_coding MGP_129S1SvImJ_T0063612.1 MGP_129S1SvImJ_G0027855.1 mouse_genomes_project 3 128081298 128092403 + Ndst4 protein_coding processed_transcript MGP_129S1SvImJ_T0063613.1 MGP_129S1SvImJ_G0027855.1 mouse_genomes_project 3 128111733 128127054 + MGP_129S1SvImJ_P0063613 Ndst4 protein_coding protein_coding MGP_129S1SvImJ_T0001151.1 MGP_129S1SvImJ_G0001077.1 mouse_genomes_project 3 27979913 27980781 + TEC TEC MGP_129S1SvImJ_T0014154.1 MGP_129S1SvImJ_G0012243.1 mouse_genomes_project 3 81189952 81190232 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064093.1 MGP_129S1SvImJ_G0027944.1 mouse_genomes_project 3 145787892 145833588 + MGP_129S1SvImJ_P0064093 Gbp2b protein_coding protein_coding MGP_129S1SvImJ_T0060657.1 MGP_129S1SvImJ_G0027184.1 mouse_genomes_project 3 38948888 38977477 + MGP_129S1SvImJ_P0060657 Larp1b protein_coding protein_coding MGP_129S1SvImJ_T0060658.1 MGP_129S1SvImJ_G0027184.1 mouse_genomes_project 3 38949326 38976941 + MGP_129S1SvImJ_P0060658 Larp1b protein_coding protein_coding MGP_129S1SvImJ_T0060659.1 MGP_129S1SvImJ_G0027184.1 mouse_genomes_project 3 38949352 38961547 + MGP_129S1SvImJ_P0060659 Larp1b protein_coding protein_coding MGP_129S1SvImJ_T0060660.1 MGP_129S1SvImJ_G0027184.1 mouse_genomes_project 3 38960950 38963354 + Larp1b protein_coding processed_transcript MGP_129S1SvImJ_T0060661.1 MGP_129S1SvImJ_G0027184.1 mouse_genomes_project 3 38961487 38977094 + MGP_129S1SvImJ_P0060661 Larp1b protein_coding protein_coding MGP_129S1SvImJ_T0060662.1 MGP_129S1SvImJ_G0027184.1 mouse_genomes_project 3 38963299 39013408 + MGP_129S1SvImJ_P0060662 Larp1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060663.1 MGP_129S1SvImJ_G0027184.1 mouse_genomes_project 3 38970947 38976688 + Larp1b protein_coding processed_transcript MGP_129S1SvImJ_T0060664.1 MGP_129S1SvImJ_G0027184.1 mouse_genomes_project 3 39012118 39042523 + Larp1b protein_coding processed_transcript MGP_129S1SvImJ_T0060665.1 MGP_129S1SvImJ_G0027184.1 mouse_genomes_project 3 39024279 39042579 + Larp1b protein_coding retained_intron MGP_129S1SvImJ_T0060666.1 MGP_129S1SvImJ_G0027184.1 mouse_genomes_project 3 39026173 39041996 + Larp1b protein_coding processed_transcript MGP_129S1SvImJ_T0060667.1 MGP_129S1SvImJ_G0027184.1 mouse_genomes_project 3 39026851 39041432 + MGP_129S1SvImJ_P0060667 Larp1b protein_coding protein_coding MGP_129S1SvImJ_T0060668.1 MGP_129S1SvImJ_G0027184.1 mouse_genomes_project 3 39035855 39036581 + Larp1b protein_coding processed_transcript MGP_129S1SvImJ_T0060669.1 MGP_129S1SvImJ_G0027184.1 mouse_genomes_project 3 39035874 39042543 + Larp1b protein_coding processed_transcript MGP_129S1SvImJ_T0060670.1 MGP_129S1SvImJ_G0027184.1 mouse_genomes_project 3 39039073 39040954 + Larp1b protein_coding processed_transcript MGP_129S1SvImJ_T0004284.1 MGP_129S1SvImJ_G0003769.1 mouse_genomes_project 3 85305384 85318278 + 1700036G14Rik antisense antisense MGP_129S1SvImJ_T0062156.1 MGP_129S1SvImJ_G0027526.1 mouse_genomes_project 3 93446232 93447453 + MGP_129S1SvImJ_P0062156 Lce3e protein_coding protein_coding MGP_129S1SvImJ_T0063127.1 MGP_129S1SvImJ_G0027755.1 mouse_genomes_project 3 109239891 109259311 - MGP_129S1SvImJ_P0063127 Csf1 protein_coding protein_coding MGP_129S1SvImJ_T0063128.1 MGP_129S1SvImJ_G0027755.1 mouse_genomes_project 3 109239891 109259078 - MGP_129S1SvImJ_P0063128 Csf1 protein_coding protein_coding MGP_129S1SvImJ_T0063129.1 MGP_129S1SvImJ_G0027755.1 mouse_genomes_project 3 109241857 109249823 - MGP_129S1SvImJ_P0063129 Csf1 protein_coding protein_coding MGP_129S1SvImJ_T0063130.1 MGP_129S1SvImJ_G0027755.1 mouse_genomes_project 3 109244438 109259084 - MGP_129S1SvImJ_P0063130 Csf1 protein_coding protein_coding MGP_129S1SvImJ_T0063131.1 MGP_129S1SvImJ_G0027755.1 mouse_genomes_project 3 109246576 109259084 - Csf1 protein_coding retained_intron MGP_129S1SvImJ_T0063132.1 MGP_129S1SvImJ_G0027755.1 mouse_genomes_project 3 109247385 109249585 - MGP_129S1SvImJ_P0063132 Csf1 protein_coding protein_coding MGP_129S1SvImJ_T0063133.1 MGP_129S1SvImJ_G0027755.1 mouse_genomes_project 3 109249223 109259063 - MGP_129S1SvImJ_P0063133 Csf1 protein_coding protein_coding MGP_129S1SvImJ_T0007730.1 MGP_129S1SvImJ_G0006325.1 mouse_genomes_project 3 140707546 140715681 + Gm42610 lincRNA lincRNA MGP_129S1SvImJ_T0060372.1 MGP_129S1SvImJ_G0027134.1 mouse_genomes_project 3 29471548 29776118 + MGP_129S1SvImJ_P0060372 Kcnmb2 protein_coding protein_coding MGP_129S1SvImJ_T0060373.1 MGP_129S1SvImJ_G0027134.1 mouse_genomes_project 3 29733484 29774710 + MGP_129S1SvImJ_P0060373 Kcnmb2 protein_coding protein_coding MGP_129S1SvImJ_T0098920.1 MGP_129S1SvImJ_G0036998.1 mouse_genomes_project 3 107165646 107167799 - Gm43330 sense_intronic sense_intronic MGP_129S1SvImJ_T0101700.1 MGP_129S1SvImJ_G0039709.1 mouse_genomes_project 3 129965160 129966155 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0062740.1 MGP_129S1SvImJ_G0027666.1 mouse_genomes_project 3 101283120 101330679 + MGP_129S1SvImJ_P0062740 Gdap2 protein_coding protein_coding MGP_129S1SvImJ_T0062741.1 MGP_129S1SvImJ_G0027666.1 mouse_genomes_project 3 101283257 101326166 + MGP_129S1SvImJ_P0062741 Gdap2 protein_coding protein_coding MGP_129S1SvImJ_T0062742.1 MGP_129S1SvImJ_G0027666.1 mouse_genomes_project 3 101283283 101290734 + Gdap2 protein_coding processed_transcript MGP_129S1SvImJ_T0062743.1 MGP_129S1SvImJ_G0027666.1 mouse_genomes_project 3 101318275 101330353 + MGP_129S1SvImJ_P0062743 Gdap2 protein_coding protein_coding MGP_129S1SvImJ_T0062744.1 MGP_129S1SvImJ_G0027666.1 mouse_genomes_project 3 101324382 101326166 + Gdap2 protein_coding retained_intron MGP_129S1SvImJ_T0064037.1 MGP_129S1SvImJ_G0027933.1 mouse_genomes_project 3 141578014 141617536 + MGP_129S1SvImJ_P0064037 Eif4e protein_coding protein_coding MGP_129S1SvImJ_T0064038.1 MGP_129S1SvImJ_G0027933.1 mouse_genomes_project 3 141578260 141612866 + MGP_129S1SvImJ_P0064038 Eif4e protein_coding protein_coding MGP_129S1SvImJ_T0064039.1 MGP_129S1SvImJ_G0027933.1 mouse_genomes_project 3 141579885 141612992 + MGP_129S1SvImJ_P0064039 Eif4e protein_coding protein_coding MGP_129S1SvImJ_T0064040.1 MGP_129S1SvImJ_G0027933.1 mouse_genomes_project 3 141608324 141611193 + Eif4e protein_coding retained_intron MGP_129S1SvImJ_T0007653.1 MGP_129S1SvImJ_G0006262.1 mouse_genomes_project 3 103603375 103605157 + Gm43242 lincRNA lincRNA MGP_129S1SvImJ_T0060990.1 MGP_129S1SvImJ_G0027249.1 mouse_genomes_project 3 58711774 58728588 + protein_coding unprocessed_pseudogene MGP_129S1SvImJ_T0001347.1 MGP_129S1SvImJ_G0001271.1 mouse_genomes_project 3 129423267 129424153 - TEC TEC MGP_129S1SvImJ_T0101698.1 MGP_129S1SvImJ_G0039707.1 mouse_genomes_project 3 125074178 125074472 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0013936.1 MGP_129S1SvImJ_G0012025.1 mouse_genomes_project 3 7992961 7993715 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063679.1 MGP_129S1SvImJ_G0027862.1 mouse_genomes_project 3 130046037 130121016 + MGP_129S1SvImJ_P0063679 Zgrf1 protein_coding protein_coding MGP_129S1SvImJ_T0063680.1 MGP_129S1SvImJ_G0027862.1 mouse_genomes_project 3 130046037 130121011 + MGP_129S1SvImJ_P0063680 Zgrf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063681.1 MGP_129S1SvImJ_G0027862.1 mouse_genomes_project 3 130046050 130121018 + MGP_129S1SvImJ_P0063681 Zgrf1 protein_coding protein_coding MGP_129S1SvImJ_T0063682.1 MGP_129S1SvImJ_G0027862.1 mouse_genomes_project 3 130046050 130120128 + MGP_129S1SvImJ_P0063682 Zgrf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063683.1 MGP_129S1SvImJ_G0027862.1 mouse_genomes_project 3 130046181 130059372 + MGP_129S1SvImJ_P0063683 Zgrf1 protein_coding protein_coding MGP_129S1SvImJ_T0063684.1 MGP_129S1SvImJ_G0027862.1 mouse_genomes_project 3 130080321 130119979 + MGP_129S1SvImJ_P0063684 Zgrf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063564.1 MGP_129S1SvImJ_G0027846.1 mouse_genomes_project 3 125311730 125342989 - MGP_129S1SvImJ_P0063564 Myoz2 protein_coding protein_coding MGP_129S1SvImJ_T0063565.1 MGP_129S1SvImJ_G0027846.1 mouse_genomes_project 3 125312041 125342818 - MGP_129S1SvImJ_P0063565 Myoz2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063566.1 MGP_129S1SvImJ_G0027846.1 mouse_genomes_project 3 125312126 125342978 - Myoz2 protein_coding processed_transcript MGP_129S1SvImJ_T0063567.1 MGP_129S1SvImJ_G0027846.1 mouse_genomes_project 3 125320927 125342937 - Myoz2 protein_coding processed_transcript MGP_129S1SvImJ_T0063568.1 MGP_129S1SvImJ_G0027846.1 mouse_genomes_project 3 125330762 125342926 - Myoz2 protein_coding retained_intron MGP_129S1SvImJ_T0007780.1 MGP_129S1SvImJ_G0006365.1 mouse_genomes_project 3 154840063 154843172 + Gm43468 lincRNA lincRNA MGP_129S1SvImJ_T0001298.1 MGP_129S1SvImJ_G0001222.1 mouse_genomes_project 3 106023803 106027511 + TEC TEC MGP_129S1SvImJ_T0001292.1 MGP_129S1SvImJ_G0001216.1 mouse_genomes_project 3 98193249 98194438 - TEC TEC MGP_129S1SvImJ_T0061339.1 MGP_129S1SvImJ_G0027334.1 mouse_genomes_project 3 82878849 82896140 + MGP_129S1SvImJ_P0061339 Plrg1 protein_coding protein_coding MGP_129S1SvImJ_T0061340.1 MGP_129S1SvImJ_G0027334.1 mouse_genomes_project 3 82878859 82896074 + MGP_129S1SvImJ_P0061340 Plrg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061341.1 MGP_129S1SvImJ_G0027334.1 mouse_genomes_project 3 82878882 82895957 + MGP_129S1SvImJ_P0061341 Plrg1 protein_coding protein_coding MGP_129S1SvImJ_T0061342.1 MGP_129S1SvImJ_G0027334.1 mouse_genomes_project 3 82891857 82892880 + Plrg1 protein_coding retained_intron MGP_129S1SvImJ_T0061343.1 MGP_129S1SvImJ_G0027334.1 mouse_genomes_project 3 82892787 82893978 + Plrg1 protein_coding retained_intron MGP_129S1SvImJ_T0062822.1 MGP_129S1SvImJ_G0027686.1 mouse_genomes_project 3 104183754 104211459 - MGP_129S1SvImJ_P0062822 Nr1h5 protein_coding protein_coding MGP_129S1SvImJ_T0062823.1 MGP_129S1SvImJ_G0027686.1 mouse_genomes_project 3 104184963 104205877 - MGP_129S1SvImJ_P0062823 Nr1h5 protein_coding protein_coding MGP_129S1SvImJ_T0062824.1 MGP_129S1SvImJ_G0027686.1 mouse_genomes_project 3 104184963 104205877 - MGP_129S1SvImJ_P0062824 Nr1h5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062825.1 MGP_129S1SvImJ_G0027686.1 mouse_genomes_project 3 104184963 104205877 - MGP_129S1SvImJ_P0062825 Nr1h5 protein_coding protein_coding MGP_129S1SvImJ_T0062826.1 MGP_129S1SvImJ_G0027686.1 mouse_genomes_project 3 104184963 104205877 - MGP_129S1SvImJ_P0062826 Nr1h5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064337.1 MGP_129S1SvImJ_G0027989.1 mouse_genomes_project 3 156089386 156121888 - MGP_129S1SvImJ_P0064337 Nexn protein_coding protein_coding MGP_129S1SvImJ_T0064338.1 MGP_129S1SvImJ_G0027989.1 mouse_genomes_project 3 156089386 156121337 - MGP_129S1SvImJ_P0064338 Nexn protein_coding protein_coding MGP_129S1SvImJ_T0064339.1 MGP_129S1SvImJ_G0027989.1 mouse_genomes_project 3 156089677 156121342 - MGP_129S1SvImJ_P0064339 Nexn protein_coding unknown_likely_coding MGP_129S1SvImJ_T0064340.1 MGP_129S1SvImJ_G0027989.1 mouse_genomes_project 3 156091950 156110626 - MGP_129S1SvImJ_P0064340 Nexn protein_coding protein_coding MGP_129S1SvImJ_T0064341.1 MGP_129S1SvImJ_G0027989.1 mouse_genomes_project 3 156091998 156102598 - MGP_129S1SvImJ_P0064341 Nexn protein_coding protein_coding MGP_129S1SvImJ_T0064342.1 MGP_129S1SvImJ_G0027989.1 mouse_genomes_project 3 156092035 156110626 - MGP_129S1SvImJ_P0064342 Nexn protein_coding protein_coding MGP_129S1SvImJ_T0064343.1 MGP_129S1SvImJ_G0027989.1 mouse_genomes_project 3 156092636 156099162 - Nexn protein_coding processed_transcript MGP_129S1SvImJ_T0064344.1 MGP_129S1SvImJ_G0027989.1 mouse_genomes_project 3 156097087 156098484 - Nexn protein_coding retained_intron MGP_129S1SvImJ_T0064345.1 MGP_129S1SvImJ_G0027989.1 mouse_genomes_project 3 156098303 156121338 - MGP_129S1SvImJ_P0064345 Nexn protein_coding protein_coding MGP_129S1SvImJ_T0064346.1 MGP_129S1SvImJ_G0027989.1 mouse_genomes_project 3 156098359 156110680 - MGP_129S1SvImJ_P0064346 Nexn protein_coding protein_coding MGP_129S1SvImJ_T0064347.1 MGP_129S1SvImJ_G0027989.1 mouse_genomes_project 3 156102354 156102798 - Nexn protein_coding retained_intron MGP_129S1SvImJ_T0064348.1 MGP_129S1SvImJ_G0027989.1 mouse_genomes_project 3 156102365 156121365 - MGP_129S1SvImJ_P0064348 Nexn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064349.1 MGP_129S1SvImJ_G0027989.1 mouse_genomes_project 3 156102396 156119071 - MGP_129S1SvImJ_P0064349 Nexn protein_coding protein_coding MGP_129S1SvImJ_T0064350.1 MGP_129S1SvImJ_G0027989.1 mouse_genomes_project 3 156102414 156117107 - MGP_129S1SvImJ_P0064350 Nexn protein_coding protein_coding MGP_129S1SvImJ_T0064351.1 MGP_129S1SvImJ_G0027989.1 mouse_genomes_project 3 156102516 156118095 - MGP_129S1SvImJ_P0064351 Nexn protein_coding protein_coding MGP_129S1SvImJ_T0064352.1 MGP_129S1SvImJ_G0027989.1 mouse_genomes_project 3 156106847 156121920 - Nexn protein_coding retained_intron MGP_129S1SvImJ_T0064353.1 MGP_129S1SvImJ_G0027989.1 mouse_genomes_project 3 156107060 156107429 - Nexn protein_coding retained_intron MGP_129S1SvImJ_T0061215.1 MGP_129S1SvImJ_G0027305.1 mouse_genomes_project 3 74762433 74947937 - MGP_129S1SvImJ_P0061215 Wdr49 protein_coding protein_coding MGP_129S1SvImJ_T0061216.1 MGP_129S1SvImJ_G0027305.1 mouse_genomes_project 3 74878608 74922215 - MGP_129S1SvImJ_P0061216 Wdr49 protein_coding protein_coding MGP_129S1SvImJ_T0061217.1 MGP_129S1SvImJ_G0027305.1 mouse_genomes_project 3 74878608 74947938 - MGP_129S1SvImJ_P0061217 Wdr49 protein_coding protein_coding MGP_129S1SvImJ_T0061218.1 MGP_129S1SvImJ_G0027305.1 mouse_genomes_project 3 74945592 74948353 - Wdr49 protein_coding retained_intron MGP_129S1SvImJ_T0013987.1 MGP_129S1SvImJ_G0012076.1 mouse_genomes_project 3 25624587 25624831 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064543.1 MGP_129S1SvImJ_G0028020.1 mouse_genomes_project 3 163959336 164068836 + MGP_129S1SvImJ_P0064543 Wls protein_coding protein_coding MGP_129S1SvImJ_T0064544.1 MGP_129S1SvImJ_G0028020.1 mouse_genomes_project 3 163959401 164071488 + MGP_129S1SvImJ_P0064544 Wls protein_coding protein_coding MGP_129S1SvImJ_T0064545.1 MGP_129S1SvImJ_G0028020.1 mouse_genomes_project 3 163959403 164042487 + Wls protein_coding retained_intron MGP_129S1SvImJ_T0064546.1 MGP_129S1SvImJ_G0028020.1 mouse_genomes_project 3 163959403 164043462 + Wls protein_coding retained_intron MGP_129S1SvImJ_T0064547.1 MGP_129S1SvImJ_G0028020.1 mouse_genomes_project 3 163959403 164067715 + MGP_129S1SvImJ_P0064547 Wls protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064548.1 MGP_129S1SvImJ_G0028020.1 mouse_genomes_project 3 163959574 163995613 + Wls protein_coding retained_intron MGP_129S1SvImJ_T0064549.1 MGP_129S1SvImJ_G0028020.1 mouse_genomes_project 3 163968336 163971161 + Wls protein_coding retained_intron MGP_129S1SvImJ_T0014241.1 MGP_129S1SvImJ_G0012330.1 mouse_genomes_project 3 105200365 105200829 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098876.1 MGP_129S1SvImJ_G0036954.1 mouse_genomes_project 3 99288466 99291525 + Gm43189 sense_intronic sense_intronic MGP_129S1SvImJ_T0018005.1 MGP_129S1SvImJ_G0015512.1 mouse_genomes_project 3 97067509 97069168 - Gm20627 processed_transcript lincRNA MGP_129S1SvImJ_T0018006.1 MGP_129S1SvImJ_G0015512.1 mouse_genomes_project 3 97067511 97068360 - Gm20627 processed_transcript retained_intron MGP_129S1SvImJ_T0014228.1 MGP_129S1SvImJ_G0012317.1 mouse_genomes_project 3 102396467 102396903 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061755.1 MGP_129S1SvImJ_G0027418.1 mouse_genomes_project 3 89362429 89374460 + MGP_129S1SvImJ_P0061755 Clk2 protein_coding protein_coding MGP_129S1SvImJ_T0061756.1 MGP_129S1SvImJ_G0027418.1 mouse_genomes_project 3 89362451 89364839 + MGP_129S1SvImJ_P0061756 Clk2 protein_coding protein_coding MGP_129S1SvImJ_T0061757.1 MGP_129S1SvImJ_G0027418.1 mouse_genomes_project 3 89362452 89374460 + MGP_129S1SvImJ_P0061757 Clk2 protein_coding protein_coding MGP_129S1SvImJ_T0061758.1 MGP_129S1SvImJ_G0027418.1 mouse_genomes_project 3 89362453 89374458 + Clk2 protein_coding retained_intron MGP_129S1SvImJ_T0061759.1 MGP_129S1SvImJ_G0027418.1 mouse_genomes_project 3 89362453 89370996 + MGP_129S1SvImJ_P0061759 Clk2 protein_coding protein_coding MGP_129S1SvImJ_T0061760.1 MGP_129S1SvImJ_G0027418.1 mouse_genomes_project 3 89362474 89374460 + MGP_129S1SvImJ_P0061760 Clk2 protein_coding protein_coding MGP_129S1SvImJ_T0061761.1 MGP_129S1SvImJ_G0027418.1 mouse_genomes_project 3 89362613 89374460 + MGP_129S1SvImJ_P0061761 Clk2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061762.1 MGP_129S1SvImJ_G0027418.1 mouse_genomes_project 3 89364798 89368044 + Clk2 protein_coding retained_intron MGP_129S1SvImJ_T0061763.1 MGP_129S1SvImJ_G0027418.1 mouse_genomes_project 3 89369703 89373619 + Clk2 protein_coding retained_intron MGP_129S1SvImJ_T0061764.1 MGP_129S1SvImJ_G0027418.1 mouse_genomes_project 3 89371493 89373286 + Clk2 protein_coding retained_intron MGP_129S1SvImJ_T0061765.1 MGP_129S1SvImJ_G0027418.1 mouse_genomes_project 3 89372573 89373510 + Clk2 protein_coding processed_transcript MGP_129S1SvImJ_T0060130.1 MGP_129S1SvImJ_G0027086.1 mouse_genomes_project 3 15128768 15129318 + MGP_129S1SvImJ_P0060130 Cypt12 protein_coding protein_coding MGP_129S1SvImJ_T0060017.1 MGP_129S1SvImJ_G0027052.1 mouse_genomes_project 3 5337215 5393059 + MGP_129S1SvImJ_P0060017 Stmn2 protein_coding protein_coding MGP_129S1SvImJ_T0060018.1 MGP_129S1SvImJ_G0027052.1 mouse_genomes_project 3 5337370 5380277 + Stmn2 protein_coding retained_intron MGP_129S1SvImJ_T0060019.1 MGP_129S1SvImJ_G0027052.1 mouse_genomes_project 3 5337441 5373041 + Stmn2 protein_coding retained_intron MGP_129S1SvImJ_T0060020.1 MGP_129S1SvImJ_G0027052.1 mouse_genomes_project 3 5391718 5393028 + Stmn2 protein_coding processed_transcript MGP_129S1SvImJ_T0013914.1 MGP_129S1SvImJ_G0012003.1 mouse_genomes_project 3 2926809 2927225 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013975.1 MGP_129S1SvImJ_G0012064.1 mouse_genomes_project 3 18891368 18892140 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001137.1 MGP_129S1SvImJ_G0001063.1 mouse_genomes_project 3 15801615 15805595 + TEC TEC MGP_129S1SvImJ_T0007749.1 MGP_129S1SvImJ_G0006342.1 mouse_genomes_project 3 146832076 146844599 + Gm33651 lincRNA lincRNA MGP_129S1SvImJ_T0014105.1 MGP_129S1SvImJ_G0012194.1 mouse_genomes_project 3 65238258 65238517 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004381.1 MGP_129S1SvImJ_G0003831.1 mouse_genomes_project 3 128844438 128850840 - Gm17225 antisense antisense MGP_129S1SvImJ_T0101023.1 MGP_129S1SvImJ_G0039090.1 mouse_genomes_project 3 49271038 49271173 - Gm24503 snoRNA snoRNA MGP_129S1SvImJ_T0014158.1 MGP_129S1SvImJ_G0012247.1 mouse_genomes_project 3 83541726 83544988 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064491.1 MGP_129S1SvImJ_G0028013.1 mouse_genomes_project 3 162043000 162075477 - MGP_129S1SvImJ_P0064491 Cth protein_coding protein_coding MGP_129S1SvImJ_T0064492.1 MGP_129S1SvImJ_G0028013.1 mouse_genomes_project 3 162043175 162046459 - Cth protein_coding processed_transcript MGP_129S1SvImJ_T0064493.1 MGP_129S1SvImJ_G0028013.1 mouse_genomes_project 3 162046048 162055892 - Cth protein_coding retained_intron MGP_129S1SvImJ_T0064494.1 MGP_129S1SvImJ_G0028013.1 mouse_genomes_project 3 162070102 162075451 - Cth protein_coding retained_intron MGP_129S1SvImJ_T0061250.1 MGP_129S1SvImJ_G0027312.1 mouse_genomes_project 3 79143386 79264336 - MGP_129S1SvImJ_P0061250 Fnip2 protein_coding protein_coding MGP_129S1SvImJ_T0061251.1 MGP_129S1SvImJ_G0027312.1 mouse_genomes_project 3 79146119 79155440 - Fnip2 protein_coding retained_intron MGP_129S1SvImJ_T0061252.1 MGP_129S1SvImJ_G0027312.1 mouse_genomes_project 3 79148527 79264222 - MGP_129S1SvImJ_P0061252 Fnip2 protein_coding protein_coding MGP_129S1SvImJ_T0061253.1 MGP_129S1SvImJ_G0027312.1 mouse_genomes_project 3 79148826 79189650 - Fnip2 protein_coding retained_intron MGP_129S1SvImJ_T0061254.1 MGP_129S1SvImJ_G0027312.1 mouse_genomes_project 3 79193366 79206946 - Fnip2 protein_coding processed_transcript MGP_129S1SvImJ_T0061255.1 MGP_129S1SvImJ_G0027312.1 mouse_genomes_project 3 79196489 79264219 - Fnip2 protein_coding retained_intron MGP_129S1SvImJ_T0013917.1 MGP_129S1SvImJ_G0012006.1 mouse_genomes_project 3 3413912 3414171 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102464.1 MGP_129S1SvImJ_G0040298.1 mouse_genomes_project 3 69900781 69901816 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0064023.1 MGP_129S1SvImJ_G0027931.1 mouse_genomes_project 3 141494133 141506472 + MGP_129S1SvImJ_P0064023 Adh5 protein_coding protein_coding MGP_129S1SvImJ_T0064024.1 MGP_129S1SvImJ_G0027931.1 mouse_genomes_project 3 141494151 141496987 + Adh5 protein_coding retained_intron MGP_129S1SvImJ_T0064025.1 MGP_129S1SvImJ_G0027931.1 mouse_genomes_project 3 141494152 141497875 + Adh5 protein_coding retained_intron MGP_129S1SvImJ_T0064026.1 MGP_129S1SvImJ_G0027931.1 mouse_genomes_project 3 141494210 141496442 + Adh5 protein_coding retained_intron MGP_129S1SvImJ_T0064027.1 MGP_129S1SvImJ_G0027931.1 mouse_genomes_project 3 141494210 141498978 + MGP_129S1SvImJ_P0064027 Adh5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064028.1 MGP_129S1SvImJ_G0027931.1 mouse_genomes_project 3 141494221 141505776 + MGP_129S1SvImJ_P0064028 Adh5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064029.1 MGP_129S1SvImJ_G0027931.1 mouse_genomes_project 3 141505377 141506216 + Adh5 protein_coding retained_intron MGP_129S1SvImJ_T0014007.1 MGP_129S1SvImJ_G0012096.1 mouse_genomes_project 3 34512359 34512611 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063278.1 MGP_129S1SvImJ_G0027788.1 mouse_genomes_project 3 110486442 110497007 - MGP_129S1SvImJ_P0063278 Prpf38b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063279.1 MGP_129S1SvImJ_G0027788.1 mouse_genomes_project 3 110486444 110497038 - MGP_129S1SvImJ_P0063279 Prpf38b protein_coding protein_coding MGP_129S1SvImJ_T0063280.1 MGP_129S1SvImJ_G0027788.1 mouse_genomes_project 3 110486784 110496779 - MGP_129S1SvImJ_P0063280 Prpf38b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063281.1 MGP_129S1SvImJ_G0027788.1 mouse_genomes_project 3 110489584 110490920 - Prpf38b protein_coding retained_intron MGP_129S1SvImJ_T0063282.1 MGP_129S1SvImJ_G0027788.1 mouse_genomes_project 3 110489799 110491453 - Prpf38b protein_coding processed_transcript MGP_129S1SvImJ_T0063283.1 MGP_129S1SvImJ_G0027788.1 mouse_genomes_project 3 110489944 110493292 - Prpf38b protein_coding processed_transcript MGP_129S1SvImJ_T0063284.1 MGP_129S1SvImJ_G0027788.1 mouse_genomes_project 3 110491895 110497021 - Prpf38b protein_coding retained_intron MGP_129S1SvImJ_T0063285.1 MGP_129S1SvImJ_G0027788.1 mouse_genomes_project 3 110491898 110495940 - Prpf38b protein_coding retained_intron MGP_129S1SvImJ_T0014251.1 MGP_129S1SvImJ_G0012340.1 mouse_genomes_project 3 109383466 109384930 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010568.1 MGP_129S1SvImJ_G0008684.1 mouse_genomes_project 3 130035321 130035387 + Mir367 miRNA miRNA MGP_129S1SvImJ_T0060975.1 MGP_129S1SvImJ_G0027244.1 mouse_genomes_project 3 58056208 58057400 - Gpr87 protein_coding retained_intron MGP_129S1SvImJ_T0060976.1 MGP_129S1SvImJ_G0027244.1 mouse_genomes_project 3 58056208 58072390 - MGP_129S1SvImJ_P0060976 Gpr87 protein_coding protein_coding MGP_129S1SvImJ_T0060977.1 MGP_129S1SvImJ_G0027244.1 mouse_genomes_project 3 58056291 58057371 - MGP_129S1SvImJ_P0060977 Gpr87 protein_coding protein_coding MGP_129S1SvImJ_T0004275.1 MGP_129S1SvImJ_G0003763.1 mouse_genomes_project 3 78871396 78916406 + 4921511C10Rik antisense antisense MGP_129S1SvImJ_T0014108.1 MGP_129S1SvImJ_G0012197.1 mouse_genomes_project 3 65708405 65709138 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013973.1 MGP_129S1SvImJ_G0012062.1 mouse_genomes_project 3 18035834 18036044 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101916.1 MGP_129S1SvImJ_G0039824.1 mouse_genomes_project 3 148228829 148253348 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101917.1 MGP_129S1SvImJ_G0039824.1 mouse_genomes_project 3 148245542 148249997 - transcribed_unprocessed_pseudogene retained_intron MGP_129S1SvImJ_T0060623.1 MGP_129S1SvImJ_G0027178.1 mouse_genomes_project 3 38670994 38689116 + MGP_129S1SvImJ_P0060623 Slc25a31 protein_coding protein_coding MGP_129S1SvImJ_T0062162.1 MGP_129S1SvImJ_G0027530.1 mouse_genomes_project 3 93634766 93639441 + MGP_129S1SvImJ_P0062162 Crnn protein_coding protein_coding MGP_129S1SvImJ_T0062163.1 MGP_129S1SvImJ_G0027530.1 mouse_genomes_project 3 93634768 93639804 + MGP_129S1SvImJ_P0062163 Crnn protein_coding protein_coding MGP_129S1SvImJ_T0062164.1 MGP_129S1SvImJ_G0027530.1 mouse_genomes_project 3 93638179 93639803 + MGP_129S1SvImJ_P0062164 Crnn protein_coding protein_coding MGP_129S1SvImJ_T0102497.1 MGP_129S1SvImJ_G0040331.1 mouse_genomes_project 3 99624709 99631875 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0007714.1 MGP_129S1SvImJ_G0006310.1 mouse_genomes_project 3 134493263 134764210 + lincRNA lincRNA MGP_129S1SvImJ_T0001178.1 MGP_129S1SvImJ_G0001104.1 mouse_genomes_project 3 35711387 35712473 + TEC TEC MGP_129S1SvImJ_T0018048.1 MGP_129S1SvImJ_G0015526.1 mouse_genomes_project 3 138754814 138765135 - 4933401H06Rik processed_transcript macro_lncRNA MGP_129S1SvImJ_T0018049.1 MGP_129S1SvImJ_G0015526.1 mouse_genomes_project 3 138754916 138765135 - 4933401H06Rik processed_transcript antisense MGP_129S1SvImJ_T0062703.1 MGP_129S1SvImJ_G0027652.1 mouse_genomes_project 3 99397640 99790401 + Zfp697 protein_coding processed_transcript MGP_129S1SvImJ_T0062704.1 MGP_129S1SvImJ_G0027652.1 mouse_genomes_project 3 99397660 99431224 + MGP_129S1SvImJ_P0062704 Zfp697 protein_coding protein_coding MGP_129S1SvImJ_T0062705.1 MGP_129S1SvImJ_G0027652.1 mouse_genomes_project 3 99397727 99430980 + MGP_129S1SvImJ_P0062705 Zfp697 protein_coding protein_coding MGP_129S1SvImJ_T0007528.1 MGP_129S1SvImJ_G0006170.1 mouse_genomes_project 3 38462259 38480285 - 1700017G19Rik lincRNA lincRNA MGP_129S1SvImJ_T0007529.1 MGP_129S1SvImJ_G0006170.1 mouse_genomes_project 3 38465822 38467167 - 1700017G19Rik lincRNA lincRNA MGP_129S1SvImJ_T0062337.1 MGP_129S1SvImJ_G0027570.1 mouse_genomes_project 3 95824487 95834269 + MGP_129S1SvImJ_P0062337 protein_coding protein_coding MGP_129S1SvImJ_T0063855.1 MGP_129S1SvImJ_G0027898.1 mouse_genomes_project 3 136098792 136171411 + MGP_129S1SvImJ_P0063855 Ppa2 protein_coding protein_coding MGP_129S1SvImJ_T0063856.1 MGP_129S1SvImJ_G0027898.1 mouse_genomes_project 3 136098804 136171568 + MGP_129S1SvImJ_P0063856 Ppa2 protein_coding protein_coding MGP_129S1SvImJ_T0063857.1 MGP_129S1SvImJ_G0027898.1 mouse_genomes_project 3 136099164 136163785 + Ppa2 protein_coding processed_transcript MGP_129S1SvImJ_T0063858.1 MGP_129S1SvImJ_G0027898.1 mouse_genomes_project 3 136110102 136115202 + Ppa2 protein_coding retained_intron MGP_129S1SvImJ_T0063859.1 MGP_129S1SvImJ_G0027898.1 mouse_genomes_project 3 136127581 136161265 + Ppa2 protein_coding processed_transcript MGP_129S1SvImJ_T0063860.1 MGP_129S1SvImJ_G0027898.1 mouse_genomes_project 3 136127754 136171415 + Ppa2 protein_coding retained_intron MGP_129S1SvImJ_T0063861.1 MGP_129S1SvImJ_G0027898.1 mouse_genomes_project 3 136136708 136171400 + MGP_129S1SvImJ_P0063861 Ppa2 protein_coding protein_coding MGP_129S1SvImJ_T0063862.1 MGP_129S1SvImJ_G0027898.1 mouse_genomes_project 3 136165751 136167785 + Ppa2 protein_coding retained_intron MGP_129S1SvImJ_T0060709.1 MGP_129S1SvImJ_G0027189.1 mouse_genomes_project 3 43545039 43549675 + MGP_129S1SvImJ_P0060709 Pcdh10 protein_coding protein_coding MGP_129S1SvImJ_T0060710.1 MGP_129S1SvImJ_G0027189.1 mouse_genomes_project 3 43545047 43570800 + MGP_129S1SvImJ_P0060710 Pcdh10 protein_coding protein_coding MGP_129S1SvImJ_T0060711.1 MGP_129S1SvImJ_G0027189.1 mouse_genomes_project 3 43545066 43607285 + MGP_129S1SvImJ_P0060711 Pcdh10 protein_coding protein_coding MGP_129S1SvImJ_T0060712.1 MGP_129S1SvImJ_G0027189.1 mouse_genomes_project 3 43545068 43595105 + MGP_129S1SvImJ_P0060712 Pcdh10 protein_coding protein_coding MGP_129S1SvImJ_T0060713.1 MGP_129S1SvImJ_G0027189.1 mouse_genomes_project 3 43549272 43604155 + Pcdh10 protein_coding processed_transcript MGP_129S1SvImJ_T0014368.1 MGP_129S1SvImJ_G0012457.1 mouse_genomes_project 3 145876108 145877170 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007648.1 MGP_129S1SvImJ_G0006259.1 mouse_genomes_project 3 102947385 102949254 + Gm43134 lincRNA lincRNA MGP_129S1SvImJ_T0004231.1 MGP_129S1SvImJ_G0003729.1 mouse_genomes_project 3 30227877 30230516 + Gm37640 antisense antisense MGP_129S1SvImJ_T0014392.1 MGP_129S1SvImJ_G0012481.1 mouse_genomes_project 3 160350384 160350850 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014013.1 MGP_129S1SvImJ_G0012102.1 mouse_genomes_project 3 35462110 35462775 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013959.1 MGP_129S1SvImJ_G0012048.1 mouse_genomes_project 3 14863994 14864334 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062790.1 MGP_129S1SvImJ_G0027680.1 mouse_genomes_project 3 103311185 103370836 + MGP_129S1SvImJ_P0062790 Casq2 protein_coding protein_coding MGP_129S1SvImJ_T0062791.1 MGP_129S1SvImJ_G0027680.1 mouse_genomes_project 3 103311316 103370836 + MGP_129S1SvImJ_P0062791 Casq2 protein_coding protein_coding MGP_129S1SvImJ_T0062792.1 MGP_129S1SvImJ_G0027680.1 mouse_genomes_project 3 103311409 103369654 + MGP_129S1SvImJ_P0062792 Casq2 protein_coding protein_coding MGP_129S1SvImJ_T0062793.1 MGP_129S1SvImJ_G0027680.1 mouse_genomes_project 3 103350305 103369671 + Casq2 protein_coding processed_transcript MGP_129S1SvImJ_T0062794.1 MGP_129S1SvImJ_G0027680.1 mouse_genomes_project 3 103368373 103369908 + Casq2 protein_coding retained_intron MGP_129S1SvImJ_T0007728.1 MGP_129S1SvImJ_G0006323.1 mouse_genomes_project 3 139938971 139941274 - Gm43356 lincRNA lincRNA MGP_129S1SvImJ_T0061391.1 MGP_129S1SvImJ_G0027346.1 mouse_genomes_project 3 84617875 84662617 + MGP_129S1SvImJ_P0061391 Tmem154 protein_coding protein_coding MGP_129S1SvImJ_T0061392.1 MGP_129S1SvImJ_G0027346.1 mouse_genomes_project 3 84617893 84638607 + Tmem154 protein_coding retained_intron MGP_129S1SvImJ_T0061393.1 MGP_129S1SvImJ_G0027346.1 mouse_genomes_project 3 84618053 84638498 + Tmem154 protein_coding processed_transcript MGP_129S1SvImJ_T0061394.1 MGP_129S1SvImJ_G0027346.1 mouse_genomes_project 3 84644402 84646754 + Tmem154 protein_coding retained_intron MGP_129S1SvImJ_T0063388.1 MGP_129S1SvImJ_G0027813.1 mouse_genomes_project 3 118484438 118523618 - MGP_129S1SvImJ_P0063388 Trmt13 protein_coding protein_coding MGP_129S1SvImJ_T0063389.1 MGP_129S1SvImJ_G0027813.1 mouse_genomes_project 3 118484439 118498184 - MGP_129S1SvImJ_P0063389 Trmt13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063390.1 MGP_129S1SvImJ_G0027813.1 mouse_genomes_project 3 118484440 118498208 - MGP_129S1SvImJ_P0063390 Trmt13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063391.1 MGP_129S1SvImJ_G0027813.1 mouse_genomes_project 3 118484681 118486822 - Trmt13 protein_coding processed_transcript MGP_129S1SvImJ_T0063392.1 MGP_129S1SvImJ_G0027813.1 mouse_genomes_project 3 118487469 118498235 - Trmt13 protein_coding retained_intron MGP_129S1SvImJ_T0063393.1 MGP_129S1SvImJ_G0027813.1 mouse_genomes_project 3 118489157 118498033 - MGP_129S1SvImJ_P0063393 Trmt13 protein_coding protein_coding MGP_129S1SvImJ_T0063394.1 MGP_129S1SvImJ_G0027813.1 mouse_genomes_project 3 118492913 118498016 - MGP_129S1SvImJ_P0063394 Trmt13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063395.1 MGP_129S1SvImJ_G0027813.1 mouse_genomes_project 3 118495333 118498149 - Trmt13 protein_coding retained_intron MGP_129S1SvImJ_T0063396.1 MGP_129S1SvImJ_G0027813.1 mouse_genomes_project 3 118497306 118498186 - MGP_129S1SvImJ_P0063396 Trmt13 protein_coding protein_coding MGP_129S1SvImJ_T0063401.1 MGP_129S1SvImJ_G0027813.1 mouse_genomes_project 3 118498741 118523152 - Trmt13 protein_coding processed_transcript MGP_129S1SvImJ_T0063403.1 MGP_129S1SvImJ_G0027813.1 mouse_genomes_project 3 118522570 118523439 - Trmt13 protein_coding retained_intron MGP_129S1SvImJ_T0062072.1 MGP_129S1SvImJ_G0027469.1 mouse_genomes_project 3 90838012 90851726 + MGP_129S1SvImJ_P0062072 S100a13 protein_coding protein_coding MGP_129S1SvImJ_T0061438.1 MGP_129S1SvImJ_G0027357.1 mouse_genomes_project 3 87060813 87064996 + MGP_129S1SvImJ_P0061438 protein_coding protein_coding MGP_129S1SvImJ_T0061439.1 MGP_129S1SvImJ_G0027357.1 mouse_genomes_project 3 87060872 87065002 + MGP_129S1SvImJ_P0061439 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0004401.1 MGP_129S1SvImJ_G0003845.1 mouse_genomes_project 3 140883780 140885613 - Gm43403 antisense antisense MGP_129S1SvImJ_T0004402.1 MGP_129S1SvImJ_G0003845.1 mouse_genomes_project 3 140884926 140885423 - Gm43403 antisense antisense MGP_129S1SvImJ_T0099754.1 MGP_129S1SvImJ_G0037821.1 mouse_genomes_project 3 85989388 85989452 - Gm27811 snRNA snRNA MGP_129S1SvImJ_T0061915.1 MGP_129S1SvImJ_G0027445.1 mouse_genomes_project 3 89979940 89998203 - MGP_129S1SvImJ_P0061915 Chrnb2 protein_coding protein_coding MGP_129S1SvImJ_T0061916.1 MGP_129S1SvImJ_G0027445.1 mouse_genomes_project 3 89986026 89996996 - Chrnb2 protein_coding processed_transcript MGP_129S1SvImJ_T0061917.1 MGP_129S1SvImJ_G0027445.1 mouse_genomes_project 3 89986026 89998227 - MGP_129S1SvImJ_P0061917 Chrnb2 protein_coding protein_coding MGP_129S1SvImJ_T0007634.1 MGP_129S1SvImJ_G0006245.1 mouse_genomes_project 3 97082496 97088574 + Gm42743 lincRNA lincRNA MGP_129S1SvImJ_T0063893.1 MGP_129S1SvImJ_G0027905.1 mouse_genomes_project 3 138221287 138247272 + MGP_129S1SvImJ_P0063893 Slc9b1 protein_coding protein_coding MGP_129S1SvImJ_T0063894.1 MGP_129S1SvImJ_G0027905.1 mouse_genomes_project 3 138221292 138274395 + MGP_129S1SvImJ_P0063894 Slc9b1 protein_coding protein_coding MGP_129S1SvImJ_T0063895.1 MGP_129S1SvImJ_G0027905.1 mouse_genomes_project 3 138221304 138231316 + Slc9b1 protein_coding retained_intron MGP_129S1SvImJ_T0063896.1 MGP_129S1SvImJ_G0027905.1 mouse_genomes_project 3 138221304 138231555 + Slc9b1 protein_coding retained_intron MGP_129S1SvImJ_T0063897.1 MGP_129S1SvImJ_G0027905.1 mouse_genomes_project 3 138221316 138269574 + Slc9b1 protein_coding processed_transcript MGP_129S1SvImJ_T0063898.1 MGP_129S1SvImJ_G0027905.1 mouse_genomes_project 3 138221588 138251110 + Slc9b1 protein_coding retained_intron MGP_129S1SvImJ_T0063899.1 MGP_129S1SvImJ_G0027905.1 mouse_genomes_project 3 138222027 138274321 + MGP_129S1SvImJ_P0063899 Slc9b1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0063900.1 MGP_129S1SvImJ_G0027905.1 mouse_genomes_project 3 138249349 138250831 + Slc9b1 protein_coding retained_intron MGP_129S1SvImJ_T0063901.1 MGP_129S1SvImJ_G0027905.1 mouse_genomes_project 3 138259197 138274392 + MGP_129S1SvImJ_P0063901 Slc9b1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063902.1 MGP_129S1SvImJ_G0027905.1 mouse_genomes_project 3 138270493 138274392 + Slc9b1 protein_coding processed_transcript MGP_129S1SvImJ_T0061330.1 MGP_129S1SvImJ_G0027329.1 mouse_genomes_project 3 82654738 82696087 - MGP_129S1SvImJ_P0061330 Rbm46 protein_coding protein_coding MGP_129S1SvImJ_T0061331.1 MGP_129S1SvImJ_G0027329.1 mouse_genomes_project 3 82655325 82686243 - MGP_129S1SvImJ_P0061331 Rbm46 protein_coding protein_coding MGP_129S1SvImJ_T0061332.1 MGP_129S1SvImJ_G0027329.1 mouse_genomes_project 3 82655328 82686243 - MGP_129S1SvImJ_P0061332 Rbm46 protein_coding protein_coding MGP_129S1SvImJ_T0062697.1 MGP_129S1SvImJ_G0027650.1 mouse_genomes_project 3 99281908 99311105 + MGP_129S1SvImJ_P0062697 Hmgcs2 protein_coding protein_coding MGP_129S1SvImJ_T0062698.1 MGP_129S1SvImJ_G0027650.1 mouse_genomes_project 3 99281908 99311111 + MGP_129S1SvImJ_P0062698 Hmgcs2 protein_coding protein_coding MGP_129S1SvImJ_T0001415.1 MGP_129S1SvImJ_G0001338.1 mouse_genomes_project 3 161322863 161324062 - TEC TEC MGP_129S1SvImJ_T0064404.1 MGP_129S1SvImJ_G0027998.1 mouse_genomes_project 3 157817266 157873414 - MGP_129S1SvImJ_P0064404 Msh4 protein_coding protein_coding MGP_129S1SvImJ_T0064405.1 MGP_129S1SvImJ_G0027998.1 mouse_genomes_project 3 157817389 157838803 - Msh4 protein_coding retained_intron MGP_129S1SvImJ_T0064406.1 MGP_129S1SvImJ_G0027998.1 mouse_genomes_project 3 157817389 157844802 - Msh4 protein_coding retained_intron MGP_129S1SvImJ_T0064407.1 MGP_129S1SvImJ_G0027998.1 mouse_genomes_project 3 157817389 157826310 - Msh4 protein_coding processed_transcript MGP_129S1SvImJ_T0064408.1 MGP_129S1SvImJ_G0027998.1 mouse_genomes_project 3 157817389 157844802 - Msh4 protein_coding retained_intron MGP_129S1SvImJ_T0064409.1 MGP_129S1SvImJ_G0027998.1 mouse_genomes_project 3 157817389 157826336 - Msh4 protein_coding retained_intron MGP_129S1SvImJ_T0064410.1 MGP_129S1SvImJ_G0027998.1 mouse_genomes_project 3 157817389 157872006 - MGP_129S1SvImJ_P0064410 Msh4 protein_coding protein_coding MGP_129S1SvImJ_T0064411.1 MGP_129S1SvImJ_G0027998.1 mouse_genomes_project 3 157817393 157872166 - MGP_129S1SvImJ_P0064411 Msh4 protein_coding protein_coding MGP_129S1SvImJ_T0001405.1 MGP_129S1SvImJ_G0001328.1 mouse_genomes_project 3 157399840 157400751 - TEC TEC MGP_129S1SvImJ_T0017993.1 MGP_129S1SvImJ_G0015506.1 mouse_genomes_project 3 81707305 81714363 - Gm9989 processed_transcript lincRNA MGP_129S1SvImJ_T0017994.1 MGP_129S1SvImJ_G0015506.1 mouse_genomes_project 3 81711232 81714428 - Gm9989 processed_transcript retained_intron MGP_129S1SvImJ_T0018029.1 MGP_129S1SvImJ_G0015521.1 mouse_genomes_project 3 120454916 120458540 + Gm26871 processed_transcript lincRNA MGP_129S1SvImJ_T0018030.1 MGP_129S1SvImJ_G0015521.1 mouse_genomes_project 3 120458377 120548262 + Gm26871 processed_transcript lincRNA MGP_129S1SvImJ_T0018031.1 MGP_129S1SvImJ_G0015521.1 mouse_genomes_project 3 120458502 120550339 + Gm26871 processed_transcript lincRNA MGP_129S1SvImJ_T0018032.1 MGP_129S1SvImJ_G0015521.1 mouse_genomes_project 3 120458513 120505530 + Gm26871 processed_transcript lincRNA MGP_129S1SvImJ_T0018033.1 MGP_129S1SvImJ_G0015521.1 mouse_genomes_project 3 120458546 120565799 + Gm26871 processed_transcript lincRNA MGP_129S1SvImJ_T0018034.1 MGP_129S1SvImJ_G0015521.1 mouse_genomes_project 3 120489965 120492985 + Gm26871 processed_transcript retained_intron MGP_129S1SvImJ_T0004242.1 MGP_129S1SvImJ_G0003736.1 mouse_genomes_project 3 34891867 34902324 - Gm12531 antisense antisense MGP_129S1SvImJ_T0004243.1 MGP_129S1SvImJ_G0003736.1 mouse_genomes_project 3 34891869 34902319 - Gm12531 antisense antisense MGP_129S1SvImJ_T0063717.1 MGP_129S1SvImJ_G0027869.1 mouse_genomes_project 3 131908130 131977627 - MGP_129S1SvImJ_P0063717 Enpep protein_coding protein_coding MGP_129S1SvImJ_T0063718.1 MGP_129S1SvImJ_G0027869.1 mouse_genomes_project 3 131909232 131977171 - MGP_129S1SvImJ_P0063718 Enpep protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063719.1 MGP_129S1SvImJ_G0027869.1 mouse_genomes_project 3 131919341 131925046 - Enpep protein_coding retained_intron MGP_129S1SvImJ_T0063720.1 MGP_129S1SvImJ_G0027869.1 mouse_genomes_project 3 131919512 131952942 - MGP_129S1SvImJ_P0063720 Enpep protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063721.1 MGP_129S1SvImJ_G0027869.1 mouse_genomes_project 3 131942526 131977627 - Enpep protein_coding retained_intron MGP_129S1SvImJ_T0004214.1 MGP_129S1SvImJ_G0003718.1 mouse_genomes_project 3 1932719 1979232 - 2700069I18Rik antisense antisense MGP_129S1SvImJ_T0004215.1 MGP_129S1SvImJ_G0003718.1 mouse_genomes_project 3 1934113 1979250 - 2700069I18Rik antisense antisense MGP_129S1SvImJ_T0004223.1 MGP_129S1SvImJ_G0003724.1 mouse_genomes_project 3 27472509 27515440 + Mecomos antisense antisense MGP_129S1SvImJ_T0004224.1 MGP_129S1SvImJ_G0003724.1 mouse_genomes_project 3 27478806 27484483 + Mecomos antisense antisense MGP_129S1SvImJ_T0004295.1 MGP_129S1SvImJ_G0003778.1 mouse_genomes_project 3 89602480 89610943 + Gm15417 antisense antisense MGP_129S1SvImJ_T0004296.1 MGP_129S1SvImJ_G0003778.1 mouse_genomes_project 3 89602600 89610943 + Gm15417 antisense antisense MGP_129S1SvImJ_T0004297.1 MGP_129S1SvImJ_G0003778.1 mouse_genomes_project 3 89604831 89611407 + Gm15417 antisense antisense MGP_129S1SvImJ_T0004298.1 MGP_129S1SvImJ_G0003778.1 mouse_genomes_project 3 89606551 89610865 + Gm15417 antisense antisense MGP_129S1SvImJ_T0061241.1 MGP_129S1SvImJ_G0027310.1 mouse_genomes_project 3 78707338 78797249 - MGP_129S1SvImJ_P0061241 Rapgef2 protein_coding protein_coding MGP_129S1SvImJ_T0061242.1 MGP_129S1SvImJ_G0027310.1 mouse_genomes_project 3 78707350 78798144 - MGP_129S1SvImJ_P0061242 Rapgef2 protein_coding protein_coding MGP_129S1SvImJ_T0061243.1 MGP_129S1SvImJ_G0027310.1 mouse_genomes_project 3 78707353 78952059 - MGP_129S1SvImJ_P0061243 Rapgef2 protein_coding protein_coding MGP_129S1SvImJ_T0061244.1 MGP_129S1SvImJ_G0027310.1 mouse_genomes_project 3 78758467 78830019 - Rapgef2 protein_coding retained_intron MGP_129S1SvImJ_T0061245.1 MGP_129S1SvImJ_G0027310.1 mouse_genomes_project 3 78761567 78830121 - Rapgef2 protein_coding processed_transcript MGP_129S1SvImJ_T0061246.1 MGP_129S1SvImJ_G0027310.1 mouse_genomes_project 3 78826283 78838185 - Rapgef2 protein_coding retained_intron MGP_129S1SvImJ_T0062108.1 MGP_129S1SvImJ_G0027482.1 mouse_genomes_project 3 91126420 91128351 - MGP_129S1SvImJ_P0062108 Gm5849 protein_coding protein_coding MGP_129S1SvImJ_T0060695.1 MGP_129S1SvImJ_G0027188.1 mouse_genomes_project 3 39771273 39784855 + MGP_129S1SvImJ_P0060695 D3Ertd751e protein_coding protein_coding MGP_129S1SvImJ_T0060696.1 MGP_129S1SvImJ_G0027188.1 mouse_genomes_project 3 39771323 39785053 + MGP_129S1SvImJ_P0060696 D3Ertd751e protein_coding protein_coding MGP_129S1SvImJ_T0060697.1 MGP_129S1SvImJ_G0027188.1 mouse_genomes_project 3 39771326 39787642 + MGP_129S1SvImJ_P0060697 D3Ertd751e protein_coding protein_coding MGP_129S1SvImJ_T0060698.1 MGP_129S1SvImJ_G0027188.1 mouse_genomes_project 3 39771329 39788101 + MGP_129S1SvImJ_P0060698 D3Ertd751e protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060699.1 MGP_129S1SvImJ_G0027188.1 mouse_genomes_project 3 39771330 39787652 + MGP_129S1SvImJ_P0060699 D3Ertd751e protein_coding protein_coding MGP_129S1SvImJ_T0060700.1 MGP_129S1SvImJ_G0027188.1 mouse_genomes_project 3 39771330 39787651 + MGP_129S1SvImJ_P0060700 D3Ertd751e protein_coding protein_coding MGP_129S1SvImJ_T0060701.1 MGP_129S1SvImJ_G0027188.1 mouse_genomes_project 3 39771366 39787651 + MGP_129S1SvImJ_P0060701 D3Ertd751e protein_coding protein_coding MGP_129S1SvImJ_T0060702.1 MGP_129S1SvImJ_G0027188.1 mouse_genomes_project 3 39771368 39772633 + D3Ertd751e protein_coding retained_intron MGP_129S1SvImJ_T0060703.1 MGP_129S1SvImJ_G0027188.1 mouse_genomes_project 3 39771375 39786374 + MGP_129S1SvImJ_P0060703 D3Ertd751e protein_coding protein_coding MGP_129S1SvImJ_T0060704.1 MGP_129S1SvImJ_G0027188.1 mouse_genomes_project 3 39771437 39782495 + MGP_129S1SvImJ_P0060704 D3Ertd751e protein_coding protein_coding MGP_129S1SvImJ_T0060705.1 MGP_129S1SvImJ_G0027188.1 mouse_genomes_project 3 39773379 39784877 + MGP_129S1SvImJ_P0060705 D3Ertd751e protein_coding protein_coding MGP_129S1SvImJ_T0060706.1 MGP_129S1SvImJ_G0027188.1 mouse_genomes_project 3 39775194 39784893 + MGP_129S1SvImJ_P0060706 D3Ertd751e protein_coding protein_coding MGP_129S1SvImJ_T0060707.1 MGP_129S1SvImJ_G0027188.1 mouse_genomes_project 3 39775424 39787669 + MGP_129S1SvImJ_P0060707 D3Ertd751e protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060708.1 MGP_129S1SvImJ_G0027188.1 mouse_genomes_project 3 39777292 39785228 + D3Ertd751e protein_coding retained_intron MGP_129S1SvImJ_T0063152.1 MGP_129S1SvImJ_G0027760.1 mouse_genomes_project 3 109489974 109496929 - MGP_129S1SvImJ_P0063152 Gstm3 protein_coding protein_coding MGP_129S1SvImJ_T0004392.1 MGP_129S1SvImJ_G0003840.1 mouse_genomes_project 3 134100949 134114973 + 4930534D22Rik antisense antisense MGP_129S1SvImJ_T0001225.1 MGP_129S1SvImJ_G0001149.1 mouse_genomes_project 3 50560292 50567247 - TEC TEC MGP_129S1SvImJ_T0099801.1 MGP_129S1SvImJ_G0037868.1 mouse_genomes_project 3 155768487 155768549 - Gm25056 snRNA snRNA MGP_129S1SvImJ_T0014156.1 MGP_129S1SvImJ_G0012245.1 mouse_genomes_project 3 82388024 82388523 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001383.1 MGP_129S1SvImJ_G0001306.1 mouse_genomes_project 3 138797988 138801835 + TEC TEC MGP_129S1SvImJ_T0014307.1 MGP_129S1SvImJ_G0012396.1 mouse_genomes_project 3 126085097 126085701 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062696.1 MGP_129S1SvImJ_G0027649.1 mouse_genomes_project 3 99222081 99236698 + MGP_129S1SvImJ_P0062696 Reg4 protein_coding protein_coding MGP_129S1SvImJ_T0098871.1 MGP_129S1SvImJ_G0036949.1 mouse_genomes_project 3 90319813 90323201 + sense_intronic sense_intronic MGP_129S1SvImJ_T0062972.1 MGP_129S1SvImJ_G0027712.1 mouse_genomes_project 3 106143591 106191915 - MGP_129S1SvImJ_P0062972 Capza1 protein_coding protein_coding MGP_129S1SvImJ_T0062973.1 MGP_129S1SvImJ_G0027712.1 mouse_genomes_project 3 106157457 106191810 - MGP_129S1SvImJ_P0062973 Capza1 protein_coding protein_coding MGP_129S1SvImJ_T0062974.1 MGP_129S1SvImJ_G0027712.1 mouse_genomes_project 3 106165642 106168493 - Capza1 protein_coding retained_intron MGP_129S1SvImJ_T0062975.1 MGP_129S1SvImJ_G0027712.1 mouse_genomes_project 3 106167818 106191783 - Capza1 protein_coding retained_intron MGP_129S1SvImJ_T0098925.1 MGP_129S1SvImJ_G0037003.1 mouse_genomes_project 3 147476324 147478414 - Gm43445 sense_intronic sense_intronic MGP_129S1SvImJ_T0062124.1 MGP_129S1SvImJ_G0027497.1 mouse_genomes_project 3 92882362 92884343 - MGP_129S1SvImJ_P0062124 Sprr1b protein_coding protein_coding MGP_129S1SvImJ_T0060545.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34681467 34711595 + 4932438A13Rik protein_coding retained_intron MGP_129S1SvImJ_T0060546.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34681469 34892685 + MGP_129S1SvImJ_P0060546 4932438A13Rik protein_coding protein_coding MGP_129S1SvImJ_T0060547.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34681484 34710298 + 4932438A13Rik protein_coding retained_intron MGP_129S1SvImJ_T0060548.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34681484 34772712 + 4932438A13Rik protein_coding retained_intron MGP_129S1SvImJ_T0060549.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34681516 34892672 + MGP_129S1SvImJ_P0060549 4932438A13Rik protein_coding unknown_likely_coding MGP_129S1SvImJ_T0060550.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34681519 34777480 + MGP_129S1SvImJ_P0060550 4932438A13Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060551.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34682831 34760424 + 4932438A13Rik protein_coding retained_intron MGP_129S1SvImJ_T0060552.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34691061 34892685 + MGP_129S1SvImJ_P0060552 4932438A13Rik protein_coding protein_coding MGP_129S1SvImJ_T0060553.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34691074 34710305 + 4932438A13Rik protein_coding retained_intron MGP_129S1SvImJ_T0060554.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34712072 34720827 + 4932438A13Rik protein_coding retained_intron MGP_129S1SvImJ_T0060555.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34720736 34777482 + MGP_129S1SvImJ_P0060555 4932438A13Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060556.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34732462 34748924 + 4932438A13Rik protein_coding retained_intron MGP_129S1SvImJ_T0060557.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34775548 34777477 + 4932438A13Rik protein_coding retained_intron MGP_129S1SvImJ_T0060558.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34841758 34892667 + MGP_129S1SvImJ_P0060558 4932438A13Rik protein_coding protein_coding MGP_129S1SvImJ_T0060559.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34846155 34892668 + MGP_129S1SvImJ_P0060559 4932438A13Rik protein_coding protein_coding MGP_129S1SvImJ_T0060560.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34846286 34892666 + MGP_129S1SvImJ_P0060560 4932438A13Rik protein_coding protein_coding MGP_129S1SvImJ_T0060561.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34849086 34865626 + MGP_129S1SvImJ_P0060561 4932438A13Rik protein_coding protein_coding MGP_129S1SvImJ_T0060562.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34853409 34858408 + 4932438A13Rik protein_coding retained_intron MGP_129S1SvImJ_T0060563.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34854732 34858638 + 4932438A13Rik protein_coding retained_intron MGP_129S1SvImJ_T0060564.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34858980 34875306 + 4932438A13Rik protein_coding retained_intron MGP_129S1SvImJ_T0060565.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34875288 34878383 + 4932438A13Rik protein_coding retained_intron MGP_129S1SvImJ_T0060566.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34875985 34878385 + 4932438A13Rik protein_coding retained_intron MGP_129S1SvImJ_T0060567.1 MGP_129S1SvImJ_G0027164.1 mouse_genomes_project 3 34880643 34883384 + 4932438A13Rik protein_coding retained_intron MGP_129S1SvImJ_T0007605.1 MGP_129S1SvImJ_G0006228.1 mouse_genomes_project 3 85385059 85418010 - Gm42813 lincRNA lincRNA MGP_129S1SvImJ_T0014366.1 MGP_129S1SvImJ_G0012455.1 mouse_genomes_project 3 145567430 145567568 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007735.1 MGP_129S1SvImJ_G0006330.1 mouse_genomes_project 3 142871017 142874600 - Gm32693 lincRNA lincRNA MGP_129S1SvImJ_T0099768.1 MGP_129S1SvImJ_G0037835.1 mouse_genomes_project 3 93440826 93440935 - Gm22577 snRNA snRNA MGP_129S1SvImJ_T0001344.1 MGP_129S1SvImJ_G0001268.1 mouse_genomes_project 3 129176017 129177921 + TEC TEC MGP_129S1SvImJ_T0007697.1 MGP_129S1SvImJ_G0006295.1 mouse_genomes_project 3 126571684 126650039 + Gm43731 lincRNA lincRNA MGP_129S1SvImJ_T0102487.1 MGP_129S1SvImJ_G0040321.1 mouse_genomes_project 3 94527450 94527852 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102455.1 MGP_129S1SvImJ_G0040289.1 mouse_genomes_project 3 18841312 18843011 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0014119.1 MGP_129S1SvImJ_G0012208.1 mouse_genomes_project 3 68829754 68830768 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099784.1 MGP_129S1SvImJ_G0037851.1 mouse_genomes_project 3 122454923 122455029 - Gm23733 snRNA snRNA MGP_129S1SvImJ_T0013927.1 MGP_129S1SvImJ_G0012016.1 mouse_genomes_project 3 5908631 5908953 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098576.1 MGP_129S1SvImJ_G0036661.1 mouse_genomes_project 3 6762339 6762448 - Gm24786 rRNA rRNA MGP_129S1SvImJ_T0060328.1 MGP_129S1SvImJ_G0027125.1 mouse_genomes_project 3 28175883 28198277 - MGP_129S1SvImJ_P0060328 Lrrc31 protein_coding protein_coding MGP_129S1SvImJ_T0060329.1 MGP_129S1SvImJ_G0027125.1 mouse_genomes_project 3 28179505 28198290 - MGP_129S1SvImJ_P0060329 Lrrc31 protein_coding protein_coding MGP_129S1SvImJ_T0060330.1 MGP_129S1SvImJ_G0027125.1 mouse_genomes_project 3 28196393 28198215 - Lrrc31 protein_coding retained_intron MGP_129S1SvImJ_T0060331.1 MGP_129S1SvImJ_G0027125.1 mouse_genomes_project 3 28196568 28198257 - Lrrc31 protein_coding processed_transcript MGP_129S1SvImJ_T0013919.1 MGP_129S1SvImJ_G0012008.1 mouse_genomes_project 3 4239648 4239768 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004286.1 MGP_129S1SvImJ_G0003771.1 mouse_genomes_project 3 88317249 88324660 - 1700113A16Rik antisense antisense MGP_129S1SvImJ_T0004287.1 MGP_129S1SvImJ_G0003771.1 mouse_genomes_project 3 88317249 88324567 - 1700113A16Rik antisense antisense MGP_129S1SvImJ_T0004288.1 MGP_129S1SvImJ_G0003771.1 mouse_genomes_project 3 88317702 88324581 - 1700113A16Rik antisense antisense MGP_129S1SvImJ_T0061205.1 MGP_129S1SvImJ_G0027302.1 mouse_genomes_project 3 73046987 73128173 - MGP_129S1SvImJ_P0061205 Bche protein_coding protein_coding MGP_129S1SvImJ_T0061206.1 MGP_129S1SvImJ_G0027302.1 mouse_genomes_project 3 73059852 73128000 - Bche protein_coding retained_intron MGP_129S1SvImJ_T0061207.1 MGP_129S1SvImJ_G0027302.1 mouse_genomes_project 3 73119413 73128025 - MGP_129S1SvImJ_P0061207 Bche protein_coding protein_coding MGP_129S1SvImJ_T0061208.1 MGP_129S1SvImJ_G0027302.1 mouse_genomes_project 3 73121902 73128025 - Bche protein_coding processed_transcript MGP_129S1SvImJ_T0001284.1 MGP_129S1SvImJ_G0001208.1 mouse_genomes_project 3 96343745 96345350 + TEC TEC MGP_129S1SvImJ_T0062730.1 MGP_129S1SvImJ_G0027664.1 mouse_genomes_project 3 100998427 101069099 + Spag17 protein_coding processed_transcript MGP_129S1SvImJ_T0062731.1 MGP_129S1SvImJ_G0027664.1 mouse_genomes_project 3 100998438 101263086 + MGP_129S1SvImJ_P0062731 Spag17 protein_coding protein_coding MGP_129S1SvImJ_T0062732.1 MGP_129S1SvImJ_G0027664.1 mouse_genomes_project 3 101133874 101139672 + Spag17 protein_coding retained_intron MGP_129S1SvImJ_T0062733.1 MGP_129S1SvImJ_G0027664.1 mouse_genomes_project 3 101139615 101153076 + Spag17 protein_coding retained_intron MGP_129S1SvImJ_T0062540.1 MGP_129S1SvImJ_G0027605.1 mouse_genomes_project 3 96972898 96983454 + Mtmr11 protein_coding retained_intron MGP_129S1SvImJ_T0062541.1 MGP_129S1SvImJ_G0027605.1 mouse_genomes_project 3 96972898 96983455 + MGP_129S1SvImJ_P0062541 Mtmr11 protein_coding protein_coding MGP_129S1SvImJ_T0062542.1 MGP_129S1SvImJ_G0027605.1 mouse_genomes_project 3 96972979 96983455 + MGP_129S1SvImJ_P0062542 Mtmr11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062543.1 MGP_129S1SvImJ_G0027605.1 mouse_genomes_project 3 96973060 96974282 + Mtmr11 protein_coding retained_intron MGP_129S1SvImJ_T0062544.1 MGP_129S1SvImJ_G0027605.1 mouse_genomes_project 3 96973474 96983455 + Mtmr11 protein_coding processed_transcript MGP_129S1SvImJ_T0062545.1 MGP_129S1SvImJ_G0027605.1 mouse_genomes_project 3 96980612 96981731 + Mtmr11 protein_coding processed_transcript MGP_129S1SvImJ_T0062546.1 MGP_129S1SvImJ_G0027605.1 mouse_genomes_project 3 96982322 96983207 + Mtmr11 protein_coding processed_transcript MGP_129S1SvImJ_T0007496.1 MGP_129S1SvImJ_G0006146.1 mouse_genomes_project 3 31335243 31393510 - lincRNA lincRNA MGP_129S1SvImJ_T0014029.1 MGP_129S1SvImJ_G0012118.1 mouse_genomes_project 3 41460678 41461849 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062874.1 MGP_129S1SvImJ_G0027693.1 mouse_genomes_project 3 104540385 104635526 + MGP_129S1SvImJ_P0062874 Trim33 protein_coding protein_coding MGP_129S1SvImJ_T0062875.1 MGP_129S1SvImJ_G0027693.1 mouse_genomes_project 3 104540971 104632015 + MGP_129S1SvImJ_P0062875 Trim33 protein_coding protein_coding MGP_129S1SvImJ_T0062876.1 MGP_129S1SvImJ_G0027693.1 mouse_genomes_project 3 104576482 104594819 + MGP_129S1SvImJ_P0062876 Trim33 protein_coding protein_coding MGP_129S1SvImJ_T0062877.1 MGP_129S1SvImJ_G0027693.1 mouse_genomes_project 3 104586496 104592092 + Trim33 protein_coding retained_intron MGP_129S1SvImJ_T0062878.1 MGP_129S1SvImJ_G0027693.1 mouse_genomes_project 3 104591749 104593099 + Trim33 protein_coding retained_intron MGP_129S1SvImJ_T0062879.1 MGP_129S1SvImJ_G0027693.1 mouse_genomes_project 3 104591841 104628742 + MGP_129S1SvImJ_P0062879 Trim33 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062880.1 MGP_129S1SvImJ_G0027693.1 mouse_genomes_project 3 104615626 104632015 + MGP_129S1SvImJ_P0062880 Trim33 protein_coding protein_coding MGP_129S1SvImJ_T0007649.1 MGP_129S1SvImJ_G0006260.1 mouse_genomes_project 3 103478475 103479072 + Gm43241 lincRNA lincRNA MGP_129S1SvImJ_T0001141.1 MGP_129S1SvImJ_G0001067.1 mouse_genomes_project 3 20050808 20051059 + TEC TEC MGP_129S1SvImJ_T0062512.1 MGP_129S1SvImJ_G0027600.1 mouse_genomes_project 3 96682206 96689123 - MGP_129S1SvImJ_P0062512 Car14 protein_coding protein_coding MGP_129S1SvImJ_T0062513.1 MGP_129S1SvImJ_G0027600.1 mouse_genomes_project 3 96684178 96689117 - MGP_129S1SvImJ_P0062513 Car14 protein_coding protein_coding MGP_129S1SvImJ_T0062514.1 MGP_129S1SvImJ_G0027600.1 mouse_genomes_project 3 96685950 96689116 - Car14 protein_coding retained_intron MGP_129S1SvImJ_T0062515.1 MGP_129S1SvImJ_G0027600.1 mouse_genomes_project 3 96686331 96688180 - Car14 protein_coding retained_intron MGP_129S1SvImJ_T0004428.1 MGP_129S1SvImJ_G0003865.1 mouse_genomes_project 3 161020392 161036982 - Gm15577 antisense antisense MGP_129S1SvImJ_T0014015.1 MGP_129S1SvImJ_G0012104.1 mouse_genomes_project 3 35604852 35605223 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001249.1 MGP_129S1SvImJ_G0001173.1 mouse_genomes_project 3 59466604 59470596 + TEC TEC MGP_129S1SvImJ_T0014066.1 MGP_129S1SvImJ_G0012155.1 mouse_genomes_project 3 56033971 56034224 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007606.1 MGP_129S1SvImJ_G0006229.1 mouse_genomes_project 3 85551072 85560147 - Gm42812 lincRNA lincRNA MGP_129S1SvImJ_T0062567.1 MGP_129S1SvImJ_G0027619.1 mouse_genomes_project 3 97435449 97439375 + MGP_129S1SvImJ_P0062567 Txnip protein_coding protein_coding MGP_129S1SvImJ_T0062568.1 MGP_129S1SvImJ_G0027619.1 mouse_genomes_project 3 97435452 97439349 + MGP_129S1SvImJ_P0062568 Txnip protein_coding protein_coding MGP_129S1SvImJ_T0062569.1 MGP_129S1SvImJ_G0027619.1 mouse_genomes_project 3 97436990 97437506 + Txnip protein_coding retained_intron MGP_129S1SvImJ_T0062570.1 MGP_129S1SvImJ_G0027619.1 mouse_genomes_project 3 97437003 97437697 + Txnip protein_coding processed_transcript MGP_129S1SvImJ_T0062571.1 MGP_129S1SvImJ_G0027619.1 mouse_genomes_project 3 97437215 97439350 + Txnip protein_coding processed_transcript MGP_129S1SvImJ_T0062572.1 MGP_129S1SvImJ_G0027619.1 mouse_genomes_project 3 97437546 97438058 + Txnip protein_coding retained_intron MGP_129S1SvImJ_T0099772.1 MGP_129S1SvImJ_G0037839.1 mouse_genomes_project 3 97281566 97281731 + Gm24136 snRNA snRNA MGP_129S1SvImJ_T0060374.1 MGP_129S1SvImJ_G0027135.1 mouse_genomes_project 3 29925699 29958619 - MGP_129S1SvImJ_P0060374 Zmat3 protein_coding protein_coding MGP_129S1SvImJ_T0060375.1 MGP_129S1SvImJ_G0027135.1 mouse_genomes_project 3 29925703 29958561 - MGP_129S1SvImJ_P0060375 Zmat3 protein_coding protein_coding MGP_129S1SvImJ_T0060376.1 MGP_129S1SvImJ_G0027135.1 mouse_genomes_project 3 29954013 29958401 - MGP_129S1SvImJ_P0060376 Zmat3 protein_coding protein_coding MGP_129S1SvImJ_T0060377.1 MGP_129S1SvImJ_G0027135.1 mouse_genomes_project 3 29955139 29958961 - Zmat3 protein_coding retained_intron MGP_129S1SvImJ_T0062833.1 MGP_129S1SvImJ_G0027688.1 mouse_genomes_project 3 104261881 104301205 + MGP_129S1SvImJ_P0062833 Csde1 protein_coding protein_coding MGP_129S1SvImJ_T0062834.1 MGP_129S1SvImJ_G0027688.1 mouse_genomes_project 3 104261915 104301012 + MGP_129S1SvImJ_P0062834 Csde1 protein_coding protein_coding MGP_129S1SvImJ_T0062835.1 MGP_129S1SvImJ_G0027688.1 mouse_genomes_project 3 104261921 104301207 + MGP_129S1SvImJ_P0062835 Csde1 protein_coding protein_coding MGP_129S1SvImJ_T0062836.1 MGP_129S1SvImJ_G0027688.1 mouse_genomes_project 3 104261928 104300723 + MGP_129S1SvImJ_P0062836 Csde1 protein_coding protein_coding MGP_129S1SvImJ_T0062837.1 MGP_129S1SvImJ_G0027688.1 mouse_genomes_project 3 104261972 104300825 + MGP_129S1SvImJ_P0062837 Csde1 protein_coding protein_coding MGP_129S1SvImJ_T0062838.1 MGP_129S1SvImJ_G0027688.1 mouse_genomes_project 3 104269952 104285738 + Csde1 protein_coding retained_intron MGP_129S1SvImJ_T0062839.1 MGP_129S1SvImJ_G0027688.1 mouse_genomes_project 3 104270045 104271848 + Csde1 protein_coding retained_intron MGP_129S1SvImJ_T0062840.1 MGP_129S1SvImJ_G0027688.1 mouse_genomes_project 3 104271115 104286866 + Csde1 protein_coding processed_transcript MGP_129S1SvImJ_T0062841.1 MGP_129S1SvImJ_G0027688.1 mouse_genomes_project 3 104282720 104287614 + Csde1 protein_coding processed_transcript MGP_129S1SvImJ_T0062842.1 MGP_129S1SvImJ_G0027688.1 mouse_genomes_project 3 104282979 104287045 + Csde1 protein_coding retained_intron MGP_129S1SvImJ_T0062843.1 MGP_129S1SvImJ_G0027688.1 mouse_genomes_project 3 104283008 104289832 + MGP_129S1SvImJ_P0062843 Csde1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062844.1 MGP_129S1SvImJ_G0027688.1 mouse_genomes_project 3 104286173 104300807 + MGP_129S1SvImJ_P0062844 Csde1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062845.1 MGP_129S1SvImJ_G0027688.1 mouse_genomes_project 3 104286522 104287216 + Csde1 protein_coding retained_intron MGP_129S1SvImJ_T0062846.1 MGP_129S1SvImJ_G0027688.1 mouse_genomes_project 3 104293029 104294102 + Csde1 protein_coding retained_intron MGP_129S1SvImJ_T0062847.1 MGP_129S1SvImJ_G0027688.1 mouse_genomes_project 3 104299074 104300153 + Csde1 protein_coding retained_intron MGP_129S1SvImJ_T0102462.1 MGP_129S1SvImJ_G0040296.1 mouse_genomes_project 3 63260616 63281011 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0004235.1 MGP_129S1SvImJ_G0003733.1 mouse_genomes_project 3 33685557 33747243 + Gm15952 antisense antisense MGP_129S1SvImJ_T0004236.1 MGP_129S1SvImJ_G0003733.1 mouse_genomes_project 3 33685557 33696626 + Gm15952 antisense antisense MGP_129S1SvImJ_T0004237.1 MGP_129S1SvImJ_G0003733.1 mouse_genomes_project 3 33685569 33691964 + Gm15952 antisense antisense MGP_129S1SvImJ_T0101047.1 MGP_129S1SvImJ_G0039114.1 mouse_genomes_project 3 90404087 90404219 + Gm23723 snoRNA snoRNA MGP_129S1SvImJ_T0014265.1 MGP_129S1SvImJ_G0012354.1 mouse_genomes_project 3 112755049 112755366 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001240.1 MGP_129S1SvImJ_G0001164.1 mouse_genomes_project 3 54887181 54891813 - TEC TEC MGP_129S1SvImJ_T0014343.1 MGP_129S1SvImJ_G0012432.1 mouse_genomes_project 3 138828461 138829008 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098897.1 MGP_129S1SvImJ_G0036975.1 mouse_genomes_project 3 105159155 105160416 + Gm15472 sense_intronic sense_intronic MGP_129S1SvImJ_T0013950.1 MGP_129S1SvImJ_G0012039.1 mouse_genomes_project 3 11632923 11633932 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061731.1 MGP_129S1SvImJ_G0027413.1 mouse_genomes_project 3 89265421 89285488 - MGP_129S1SvImJ_P0061731 Gm43738 protein_coding protein_coding MGP_129S1SvImJ_T0063602.1 MGP_129S1SvImJ_G0027854.1 mouse_genomes_project 3 126901682 126927406 - MGP_129S1SvImJ_P0063602 1700003H04Rik protein_coding protein_coding MGP_129S1SvImJ_T0063603.1 MGP_129S1SvImJ_G0027854.1 mouse_genomes_project 3 126901682 126927406 - MGP_129S1SvImJ_P0063603 1700003H04Rik protein_coding protein_coding MGP_129S1SvImJ_T0063604.1 MGP_129S1SvImJ_G0027854.1 mouse_genomes_project 3 126911243 126927407 - MGP_129S1SvImJ_P0063604 1700003H04Rik protein_coding protein_coding MGP_129S1SvImJ_T0063605.1 MGP_129S1SvImJ_G0027854.1 mouse_genomes_project 3 126919740 126927416 - MGP_129S1SvImJ_P0063605 1700003H04Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063606.1 MGP_129S1SvImJ_G0027854.1 mouse_genomes_project 3 126919741 126927409 - MGP_129S1SvImJ_P0063606 1700003H04Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063607.1 MGP_129S1SvImJ_G0027854.1 mouse_genomes_project 3 126919741 126924806 - MGP_129S1SvImJ_P0063607 1700003H04Rik protein_coding protein_coding MGP_129S1SvImJ_T0007674.1 MGP_129S1SvImJ_G0006280.1 mouse_genomes_project 3 117578286 117579862 + Gm9889 lincRNA pseudogene MGP_129S1SvImJ_T0007675.1 MGP_129S1SvImJ_G0006280.1 mouse_genomes_project 3 117578286 117579863 + Gm9889 lincRNA lincRNA MGP_129S1SvImJ_T0064183.1 MGP_129S1SvImJ_G0027962.1 mouse_genomes_project 3 149212667 149349101 + MGP_129S1SvImJ_P0064183 Ddah1 protein_coding protein_coding MGP_129S1SvImJ_T0064184.1 MGP_129S1SvImJ_G0027962.1 mouse_genomes_project 3 149266938 149343878 + Ddah1 protein_coding processed_transcript MGP_129S1SvImJ_T0001409.1 MGP_129S1SvImJ_G0001332.1 mouse_genomes_project 3 159126995 159129786 + TEC TEC MGP_129S1SvImJ_T0063059.1 MGP_129S1SvImJ_G0027735.1 mouse_genomes_project 3 108017158 108045280 + MGP_129S1SvImJ_P0063059 Dram2 protein_coding protein_coding MGP_129S1SvImJ_T0063060.1 MGP_129S1SvImJ_G0027735.1 mouse_genomes_project 3 108017187 108033662 + Dram2 protein_coding retained_intron MGP_129S1SvImJ_T0063061.1 MGP_129S1SvImJ_G0027735.1 mouse_genomes_project 3 108017191 108024653 + MGP_129S1SvImJ_P0063061 Dram2 protein_coding protein_coding MGP_129S1SvImJ_T0063062.1 MGP_129S1SvImJ_G0027735.1 mouse_genomes_project 3 108017224 108044235 + MGP_129S1SvImJ_P0063062 Dram2 protein_coding protein_coding MGP_129S1SvImJ_T0063063.1 MGP_129S1SvImJ_G0027735.1 mouse_genomes_project 3 108017230 108033503 + Dram2 protein_coding retained_intron MGP_129S1SvImJ_T0063064.1 MGP_129S1SvImJ_G0027735.1 mouse_genomes_project 3 108017232 108044235 + MGP_129S1SvImJ_P0063064 Dram2 protein_coding protein_coding MGP_129S1SvImJ_T0063065.1 MGP_129S1SvImJ_G0027735.1 mouse_genomes_project 3 108017237 108024621 + MGP_129S1SvImJ_P0063065 Dram2 protein_coding protein_coding MGP_129S1SvImJ_T0063066.1 MGP_129S1SvImJ_G0027735.1 mouse_genomes_project 3 108017237 108040291 + MGP_129S1SvImJ_P0063066 Dram2 protein_coding protein_coding MGP_129S1SvImJ_T0063067.1 MGP_129S1SvImJ_G0027735.1 mouse_genomes_project 3 108017241 108040228 + MGP_129S1SvImJ_P0063067 Dram2 protein_coding protein_coding MGP_129S1SvImJ_T0013909.1 MGP_129S1SvImJ_G0011998.1 mouse_genomes_project 3 678245 678564 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001216.1 MGP_129S1SvImJ_G0001141.1 mouse_genomes_project 3 50323298 50324319 - TEC TEC MGP_129S1SvImJ_T0099797.1 MGP_129S1SvImJ_G0037864.1 mouse_genomes_project 3 145984903 145985008 - Gm24457 snRNA snRNA MGP_129S1SvImJ_T0063101.1 MGP_129S1SvImJ_G0027749.1 mouse_genomes_project 3 108961511 109010554 - MGP_129S1SvImJ_P0063101 Slc6a17 protein_coding protein_coding MGP_129S1SvImJ_T0063102.1 MGP_129S1SvImJ_G0027749.1 mouse_genomes_project 3 108961516 109010554 - MGP_129S1SvImJ_P0063102 Slc6a17 protein_coding protein_coding MGP_129S1SvImJ_T0063103.1 MGP_129S1SvImJ_G0027749.1 mouse_genomes_project 3 108961517 108993011 - MGP_129S1SvImJ_P0063103 Slc6a17 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063104.1 MGP_129S1SvImJ_G0027749.1 mouse_genomes_project 3 108961519 108962675 - Slc6a17 protein_coding processed_transcript MGP_129S1SvImJ_T0063105.1 MGP_129S1SvImJ_G0027749.1 mouse_genomes_project 3 108974413 109010285 - Slc6a17 protein_coding processed_transcript MGP_129S1SvImJ_T0063106.1 MGP_129S1SvImJ_G0027749.1 mouse_genomes_project 3 108981750 108985168 - Slc6a17 protein_coding processed_transcript MGP_129S1SvImJ_T0063107.1 MGP_129S1SvImJ_G0027749.1 mouse_genomes_project 3 108981752 109010554 - Slc6a17 protein_coding retained_intron MGP_129S1SvImJ_T0063108.1 MGP_129S1SvImJ_G0027749.1 mouse_genomes_project 3 108987687 109010481 - Slc6a17 protein_coding processed_transcript MGP_129S1SvImJ_T0063109.1 MGP_129S1SvImJ_G0027749.1 mouse_genomes_project 3 108987733 109009870 - MGP_129S1SvImJ_P0063109 Slc6a17 protein_coding protein_coding MGP_129S1SvImJ_T0063110.1 MGP_129S1SvImJ_G0027749.1 mouse_genomes_project 3 108993151 109009860 - Slc6a17 protein_coding processed_transcript MGP_129S1SvImJ_T0063946.1 MGP_129S1SvImJ_G0027912.1 mouse_genomes_project 3 138980994 139272847 - MGP_129S1SvImJ_P0063946 Bank1 protein_coding protein_coding MGP_129S1SvImJ_T0063947.1 MGP_129S1SvImJ_G0027912.1 mouse_genomes_project 3 138980994 139272827 - MGP_129S1SvImJ_P0063947 Bank1 protein_coding protein_coding MGP_129S1SvImJ_T0063948.1 MGP_129S1SvImJ_G0027912.1 mouse_genomes_project 3 138981080 139272806 - MGP_129S1SvImJ_P0063948 Bank1 protein_coding protein_coding MGP_129S1SvImJ_T0063949.1 MGP_129S1SvImJ_G0027912.1 mouse_genomes_project 3 138981553 138982348 - Bank1 protein_coding retained_intron MGP_129S1SvImJ_T0063950.1 MGP_129S1SvImJ_G0027912.1 mouse_genomes_project 3 138981568 138983735 - Bank1 protein_coding retained_intron MGP_129S1SvImJ_T0063951.1 MGP_129S1SvImJ_G0027912.1 mouse_genomes_project 3 139145051 139190639 - Bank1 protein_coding retained_intron MGP_129S1SvImJ_T0007469.1 MGP_129S1SvImJ_G0006126.1 mouse_genomes_project 3 12122459 12149399 + A930001A20Rik lincRNA lincRNA MGP_129S1SvImJ_T0007635.1 MGP_129S1SvImJ_G0006246.1 mouse_genomes_project 3 97212461 97235127 - lincRNA lincRNA MGP_129S1SvImJ_T0101695.1 MGP_129S1SvImJ_G0039706.1 mouse_genomes_project 3 97489882 97515017 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101696.1 MGP_129S1SvImJ_G0039706.1 mouse_genomes_project 3 97489885 97515016 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101697.1 MGP_129S1SvImJ_G0039706.1 mouse_genomes_project 3 97490847 97491949 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0004247.1 MGP_129S1SvImJ_G0003740.1 mouse_genomes_project 3 36912016 36913098 - Gm43539 antisense antisense MGP_129S1SvImJ_T0063427.1 MGP_129S1SvImJ_G0027819.1 mouse_genomes_project 3 118800452 118838288 + MGP_129S1SvImJ_P0063427 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063428.1 MGP_129S1SvImJ_G0027819.1 mouse_genomes_project 3 118802567 118857543 + MGP_129S1SvImJ_P0063428 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0063429.1 MGP_129S1SvImJ_G0027819.1 mouse_genomes_project 3 118838208 118846702 + protein_coding retained_intron MGP_129S1SvImJ_T0063430.1 MGP_129S1SvImJ_G0027819.1 mouse_genomes_project 3 118841604 118849183 + protein_coding retained_intron MGP_129S1SvImJ_T0063431.1 MGP_129S1SvImJ_G0027819.1 mouse_genomes_project 3 118846690 118853236 + MGP_129S1SvImJ_P0063431 protein_coding protein_coding MGP_129S1SvImJ_T0001359.1 MGP_129S1SvImJ_G0001283.1 mouse_genomes_project 3 130579736 130581702 + TEC TEC MGP_129S1SvImJ_T0001360.1 MGP_129S1SvImJ_G0001283.1 mouse_genomes_project 3 130579737 130581702 + TEC TEC MGP_129S1SvImJ_T0101006.1 MGP_129S1SvImJ_G0039073.1 mouse_genomes_project 3 4326442 4326559 - Gm23592 snoRNA snoRNA MGP_129S1SvImJ_T0062552.1 MGP_129S1SvImJ_G0027608.1 mouse_genomes_project 3 97008629 97010531 - MGP_129S1SvImJ_P0062552 Bola1 protein_coding protein_coding MGP_129S1SvImJ_T0062553.1 MGP_129S1SvImJ_G0027608.1 mouse_genomes_project 3 97008629 97009628 - MGP_129S1SvImJ_P0062553 Bola1 protein_coding protein_coding MGP_129S1SvImJ_T0062554.1 MGP_129S1SvImJ_G0027608.1 mouse_genomes_project 3 97008904 97026508 - MGP_129S1SvImJ_P0062554 Bola1 protein_coding protein_coding MGP_129S1SvImJ_T0001396.1 MGP_129S1SvImJ_G0001319.1 mouse_genomes_project 3 155666650 155670100 + TEC TEC MGP_129S1SvImJ_T0001361.1 MGP_129S1SvImJ_G0001284.1 mouse_genomes_project 3 131855319 131857906 - TEC TEC MGP_129S1SvImJ_T0062122.1 MGP_129S1SvImJ_G0027495.1 mouse_genomes_project 3 92873616 92874987 - MGP_129S1SvImJ_P0062122 Gm9774 protein_coding protein_coding MGP_129S1SvImJ_T0061615.1 MGP_129S1SvImJ_G0027397.1 mouse_genomes_project 3 88594493 88614984 - MGP_129S1SvImJ_P0061615 Sema4a protein_coding protein_coding MGP_129S1SvImJ_T0061616.1 MGP_129S1SvImJ_G0027397.1 mouse_genomes_project 3 88594496 88599674 - Sema4a protein_coding retained_intron MGP_129S1SvImJ_T0061617.1 MGP_129S1SvImJ_G0027397.1 mouse_genomes_project 3 88594496 88607165 - Sema4a protein_coding retained_intron MGP_129S1SvImJ_T0061618.1 MGP_129S1SvImJ_G0027397.1 mouse_genomes_project 3 88594496 88608571 - Sema4a protein_coding retained_intron MGP_129S1SvImJ_T0061619.1 MGP_129S1SvImJ_G0027397.1 mouse_genomes_project 3 88608220 88609983 - MGP_129S1SvImJ_P0061619 Sema4a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061620.1 MGP_129S1SvImJ_G0027397.1 mouse_genomes_project 3 88608358 88610319 - Sema4a protein_coding retained_intron MGP_129S1SvImJ_T0061621.1 MGP_129S1SvImJ_G0027397.1 mouse_genomes_project 3 88608567 88613847 - MGP_129S1SvImJ_P0061621 Sema4a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061622.1 MGP_129S1SvImJ_G0027397.1 mouse_genomes_project 3 88608629 88617634 - MGP_129S1SvImJ_P0061622 Sema4a protein_coding protein_coding MGP_129S1SvImJ_T0061623.1 MGP_129S1SvImJ_G0027397.1 mouse_genomes_project 3 88609100 88617563 - MGP_129S1SvImJ_P0061623 Sema4a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061624.1 MGP_129S1SvImJ_G0027397.1 mouse_genomes_project 3 88609117 88617409 - MGP_129S1SvImJ_P0061624 Sema4a protein_coding protein_coding MGP_129S1SvImJ_T0061625.1 MGP_129S1SvImJ_G0027397.1 mouse_genomes_project 3 88610576 88613838 - MGP_129S1SvImJ_P0061625 Sema4a protein_coding protein_coding MGP_129S1SvImJ_T0061626.1 MGP_129S1SvImJ_G0027397.1 mouse_genomes_project 3 88611363 88613375 - Sema4a protein_coding retained_intron MGP_129S1SvImJ_T0061627.1 MGP_129S1SvImJ_G0027397.1 mouse_genomes_project 3 88611621 88614948 - MGP_129S1SvImJ_P0061627 Sema4a protein_coding protein_coding MGP_129S1SvImJ_T0061628.1 MGP_129S1SvImJ_G0027397.1 mouse_genomes_project 3 88613297 88614969 - MGP_129S1SvImJ_P0061628 Sema4a protein_coding protein_coding MGP_129S1SvImJ_T0061629.1 MGP_129S1SvImJ_G0027397.1 mouse_genomes_project 3 88614257 88614969 - Sema4a protein_coding processed_transcript MGP_129S1SvImJ_T0099730.1 MGP_129S1SvImJ_G0037797.1 mouse_genomes_project 3 44192520 44192638 + Gm23337 snRNA snRNA MGP_129S1SvImJ_T0102488.1 MGP_129S1SvImJ_G0040322.1 mouse_genomes_project 3 94563154 94563344 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0001310.1 MGP_129S1SvImJ_G0001234.1 mouse_genomes_project 3 118032375 118033398 + TEC TEC MGP_129S1SvImJ_T0007747.1 MGP_129S1SvImJ_G0006340.1 mouse_genomes_project 3 146652049 146654181 + 1700001N15Rik lincRNA lincRNA MGP_129S1SvImJ_T0064202.1 MGP_129S1SvImJ_G0027967.1 mouse_genomes_project 3 149592825 149602324 + MGP_129S1SvImJ_P0064202 Mcoln3 protein_coding protein_coding MGP_129S1SvImJ_T0064203.1 MGP_129S1SvImJ_G0027967.1 mouse_genomes_project 3 149597022 149621073 + MGP_129S1SvImJ_P0064203 Mcoln3 protein_coding protein_coding MGP_129S1SvImJ_T0064204.1 MGP_129S1SvImJ_G0027967.1 mouse_genomes_project 3 149618346 149619930 + Mcoln3 protein_coding retained_intron MGP_129S1SvImJ_T0061447.1 MGP_129S1SvImJ_G0027362.1 mouse_genomes_project 3 87463888 87479198 + MGP_129S1SvImJ_P0061447 Fcrl1 protein_coding protein_coding MGP_129S1SvImJ_T0061448.1 MGP_129S1SvImJ_G0027362.1 mouse_genomes_project 3 87463890 87479591 + MGP_129S1SvImJ_P0061448 Fcrl1 protein_coding protein_coding MGP_129S1SvImJ_T0061449.1 MGP_129S1SvImJ_G0027362.1 mouse_genomes_project 3 87463949 87479592 + MGP_129S1SvImJ_P0061449 Fcrl1 protein_coding protein_coding MGP_129S1SvImJ_T0061450.1 MGP_129S1SvImJ_G0027362.1 mouse_genomes_project 3 87463961 87489813 + MGP_129S1SvImJ_P0061450 Fcrl1 protein_coding protein_coding MGP_129S1SvImJ_T0061451.1 MGP_129S1SvImJ_G0027362.1 mouse_genomes_project 3 87463968 87479212 + MGP_129S1SvImJ_P0061451 Fcrl1 protein_coding protein_coding MGP_129S1SvImJ_T0061452.1 MGP_129S1SvImJ_G0027362.1 mouse_genomes_project 3 87473092 87479556 + Fcrl1 protein_coding retained_intron MGP_129S1SvImJ_T0014347.1 MGP_129S1SvImJ_G0012436.1 mouse_genomes_project 3 139297614 139297773 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014045.1 MGP_129S1SvImJ_G0012134.1 mouse_genomes_project 3 48057196 48057731 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102508.1 MGP_129S1SvImJ_G0040342.1 mouse_genomes_project 3 124363315 124482035 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0001286.1 MGP_129S1SvImJ_G0001210.1 mouse_genomes_project 3 96727847 96730327 + TEC TEC MGP_129S1SvImJ_T0007712.1 MGP_129S1SvImJ_G0006308.1 mouse_genomes_project 3 133635933 133638688 + Gm43351 lincRNA lincRNA MGP_129S1SvImJ_T0061150.1 MGP_129S1SvImJ_G0027288.1 mouse_genomes_project 3 68089069 68091419 - MGP_129S1SvImJ_P0061150 Gm17641 protein_coding protein_coding MGP_129S1SvImJ_T0063432.1 MGP_129S1SvImJ_G0027820.1 mouse_genomes_project 3 118867620 118920387 - MGP_129S1SvImJ_P0063432 Palmd protein_coding protein_coding MGP_129S1SvImJ_T0063433.1 MGP_129S1SvImJ_G0027820.1 mouse_genomes_project 3 118871060 118920258 - MGP_129S1SvImJ_P0063433 Palmd protein_coding protein_coding MGP_129S1SvImJ_T0063434.1 MGP_129S1SvImJ_G0027820.1 mouse_genomes_project 3 118876527 118920386 - MGP_129S1SvImJ_P0063434 Palmd protein_coding protein_coding MGP_129S1SvImJ_T0063435.1 MGP_129S1SvImJ_G0027820.1 mouse_genomes_project 3 118916462 118920143 - Palmd protein_coding retained_intron MGP_129S1SvImJ_T0004292.1 MGP_129S1SvImJ_G0003775.1 mouse_genomes_project 3 89378292 89379831 - Gm16069 antisense antisense MGP_129S1SvImJ_T0062666.1 MGP_129S1SvImJ_G0027642.1 mouse_genomes_project 3 98583029 98609324 + MGP_129S1SvImJ_P0062666 Fmo5 protein_coding protein_coding MGP_129S1SvImJ_T0062667.1 MGP_129S1SvImJ_G0027642.1 mouse_genomes_project 3 98583063 98606596 + MGP_129S1SvImJ_P0062667 Fmo5 protein_coding protein_coding MGP_129S1SvImJ_T0062668.1 MGP_129S1SvImJ_G0027642.1 mouse_genomes_project 3 98583073 98584159 + Fmo5 protein_coding retained_intron MGP_129S1SvImJ_T0062669.1 MGP_129S1SvImJ_G0027642.1 mouse_genomes_project 3 98583082 98606646 + MGP_129S1SvImJ_P0062669 Fmo5 protein_coding protein_coding MGP_129S1SvImJ_T0062670.1 MGP_129S1SvImJ_G0027642.1 mouse_genomes_project 3 98583108 98593029 + Fmo5 protein_coding processed_transcript MGP_129S1SvImJ_T0062150.1 MGP_129S1SvImJ_G0027520.1 mouse_genomes_project 3 93312066 93313404 - MGP_129S1SvImJ_P0062150 Lce1l protein_coding protein_coding MGP_129S1SvImJ_T0060880.1 MGP_129S1SvImJ_G0027223.1 mouse_genomes_project 3 53969981 54275980 + MGP_129S1SvImJ_P0060880 Dclk1 protein_coding protein_coding MGP_129S1SvImJ_T0060881.1 MGP_129S1SvImJ_G0027223.1 mouse_genomes_project 3 53970143 54275976 + MGP_129S1SvImJ_P0060881 Dclk1 protein_coding protein_coding MGP_129S1SvImJ_T0060882.1 MGP_129S1SvImJ_G0027223.1 mouse_genomes_project 3 53970143 54204528 + MGP_129S1SvImJ_P0060882 Dclk1 protein_coding protein_coding MGP_129S1SvImJ_T0060883.1 MGP_129S1SvImJ_G0027223.1 mouse_genomes_project 3 53974688 53984039 + MGP_129S1SvImJ_P0060883 Dclk1 protein_coding protein_coding MGP_129S1SvImJ_T0060884.1 MGP_129S1SvImJ_G0027223.1 mouse_genomes_project 3 53974896 53984009 + Dclk1 protein_coding retained_intron MGP_129S1SvImJ_T0060885.1 MGP_129S1SvImJ_G0027223.1 mouse_genomes_project 3 54083743 54211151 + Dclk1 protein_coding processed_transcript MGP_129S1SvImJ_T0060886.1 MGP_129S1SvImJ_G0027223.1 mouse_genomes_project 3 54184174 54213784 + Dclk1 protein_coding retained_intron MGP_129S1SvImJ_T0060887.1 MGP_129S1SvImJ_G0027223.1 mouse_genomes_project 3 54194939 54204530 + MGP_129S1SvImJ_P0060887 Dclk1 protein_coding protein_coding MGP_129S1SvImJ_T0060888.1 MGP_129S1SvImJ_G0027223.1 mouse_genomes_project 3 54194969 54275976 + MGP_129S1SvImJ_P0060888 Dclk1 protein_coding protein_coding MGP_129S1SvImJ_T0060889.1 MGP_129S1SvImJ_G0027223.1 mouse_genomes_project 3 54195110 54272228 + MGP_129S1SvImJ_P0060889 Dclk1 protein_coding protein_coding MGP_129S1SvImJ_T0060890.1 MGP_129S1SvImJ_G0027223.1 mouse_genomes_project 3 54195127 54270811 + MGP_129S1SvImJ_P0060890 Dclk1 protein_coding protein_coding MGP_129S1SvImJ_T0060891.1 MGP_129S1SvImJ_G0027223.1 mouse_genomes_project 3 54195127 54272227 + MGP_129S1SvImJ_P0060891 Dclk1 protein_coding protein_coding MGP_129S1SvImJ_T0060892.1 MGP_129S1SvImJ_G0027223.1 mouse_genomes_project 3 54195127 54252876 + MGP_129S1SvImJ_P0060892 Dclk1 protein_coding protein_coding MGP_129S1SvImJ_T0060893.1 MGP_129S1SvImJ_G0027223.1 mouse_genomes_project 3 54195183 54257958 + MGP_129S1SvImJ_P0060893 Dclk1 protein_coding protein_coding MGP_129S1SvImJ_T0060895.1 MGP_129S1SvImJ_G0027223.1 mouse_genomes_project 3 54263554 54269988 + Dclk1 protein_coding processed_transcript MGP_129S1SvImJ_T0001290.1 MGP_129S1SvImJ_G0001214.1 mouse_genomes_project 3 97686393 97686917 + TEC TEC MGP_129S1SvImJ_T0062963.1 MGP_129S1SvImJ_G0027711.1 mouse_genomes_project 3 106118179 106139348 - MGP_129S1SvImJ_P0062963 Mov10 protein_coding protein_coding MGP_129S1SvImJ_T0062964.1 MGP_129S1SvImJ_G0027711.1 mouse_genomes_project 3 106118179 106139090 - MGP_129S1SvImJ_P0062964 Mov10 protein_coding protein_coding MGP_129S1SvImJ_T0062965.1 MGP_129S1SvImJ_G0027711.1 mouse_genomes_project 3 106118179 106139348 - MGP_129S1SvImJ_P0062965 Mov10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062966.1 MGP_129S1SvImJ_G0027711.1 mouse_genomes_project 3 106118179 106139348 - MGP_129S1SvImJ_P0062966 Mov10 protein_coding protein_coding MGP_129S1SvImJ_T0062967.1 MGP_129S1SvImJ_G0027711.1 mouse_genomes_project 3 106118179 106139027 - MGP_129S1SvImJ_P0062967 Mov10 protein_coding protein_coding MGP_129S1SvImJ_T0062968.1 MGP_129S1SvImJ_G0027711.1 mouse_genomes_project 3 106127234 106138139 - Mov10 protein_coding processed_transcript MGP_129S1SvImJ_T0062969.1 MGP_129S1SvImJ_G0027711.1 mouse_genomes_project 3 106127275 106139348 - MGP_129S1SvImJ_P0062969 Mov10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062970.1 MGP_129S1SvImJ_G0027711.1 mouse_genomes_project 3 106128092 106138901 - Mov10 protein_coding retained_intron MGP_129S1SvImJ_T0062971.1 MGP_129S1SvImJ_G0027711.1 mouse_genomes_project 3 106128113 106139086 - Mov10 protein_coding processed_transcript MGP_129S1SvImJ_T0010545.1 MGP_129S1SvImJ_G0008661.1 mouse_genomes_project 3 90566228 90566292 + Mir7012 miRNA miRNA MGP_129S1SvImJ_T0098892.1 MGP_129S1SvImJ_G0036970.1 mouse_genomes_project 3 104340667 104342624 + sense_intronic sense_intronic MGP_129S1SvImJ_T0001318.1 MGP_129S1SvImJ_G0001242.1 mouse_genomes_project 3 121838404 121844534 - TEC TEC MGP_129S1SvImJ_T0101063.1 MGP_129S1SvImJ_G0039130.1 mouse_genomes_project 3 121747100 121747231 - Gm23432 snoRNA snoRNA MGP_129S1SvImJ_T0062780.1 MGP_129S1SvImJ_G0027678.1 mouse_genomes_project 3 103071575 103134802 - MGP_129S1SvImJ_P0062780 Slc22a15 protein_coding protein_coding MGP_129S1SvImJ_T0062781.1 MGP_129S1SvImJ_G0027678.1 mouse_genomes_project 3 103074768 103134858 - MGP_129S1SvImJ_P0062781 Slc22a15 protein_coding protein_coding MGP_129S1SvImJ_T0062782.1 MGP_129S1SvImJ_G0027678.1 mouse_genomes_project 3 103074792 103106320 - Slc22a15 protein_coding processed_transcript MGP_129S1SvImJ_T0062783.1 MGP_129S1SvImJ_G0027678.1 mouse_genomes_project 3 103078336 103093723 - Slc22a15 protein_coding retained_intron MGP_129S1SvImJ_T0062784.1 MGP_129S1SvImJ_G0027678.1 mouse_genomes_project 3 103079574 103134788 - MGP_129S1SvImJ_P0062784 Slc22a15 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062785.1 MGP_129S1SvImJ_G0027678.1 mouse_genomes_project 3 103087476 103092450 - Slc22a15 protein_coding retained_intron MGP_129S1SvImJ_T0062786.1 MGP_129S1SvImJ_G0027678.1 mouse_genomes_project 3 103131412 103134862 - Slc22a15 protein_coding processed_transcript MGP_129S1SvImJ_T0001369.1 MGP_129S1SvImJ_G0001292.1 mouse_genomes_project 3 133647903 133648614 + TEC TEC MGP_129S1SvImJ_T0063179.1 MGP_129S1SvImJ_G0027767.1 mouse_genomes_project 3 109682582 109689343 - MGP_129S1SvImJ_P0063179 Gpr61 protein_coding protein_coding MGP_129S1SvImJ_T0063180.1 MGP_129S1SvImJ_G0027767.1 mouse_genomes_project 3 109682918 109689343 - MGP_129S1SvImJ_P0063180 Gpr61 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0101072.1 MGP_129S1SvImJ_G0039139.1 mouse_genomes_project 3 146007924 146008017 + Gm25965 snoRNA snoRNA MGP_129S1SvImJ_T0014121.1 MGP_129S1SvImJ_G0012210.1 mouse_genomes_project 3 68983845 68984351 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007757.1 MGP_129S1SvImJ_G0006349.1 mouse_genomes_project 3 147159478 147160403 + Gm42708 lincRNA lincRNA MGP_129S1SvImJ_T0098910.1 MGP_129S1SvImJ_G0036988.1 mouse_genomes_project 3 105808377 105810658 - A530041M06Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0062017.1 MGP_129S1SvImJ_G0027460.1 mouse_genomes_project 3 90561264 90576747 + MGP_129S1SvImJ_P0062017 Dennd4b protein_coding protein_coding MGP_129S1SvImJ_T0062018.1 MGP_129S1SvImJ_G0027460.1 mouse_genomes_project 3 90562593 90576747 + MGP_129S1SvImJ_P0062018 Dennd4b protein_coding protein_coding MGP_129S1SvImJ_T0062019.1 MGP_129S1SvImJ_G0027460.1 mouse_genomes_project 3 90563540 90571722 + MGP_129S1SvImJ_P0062019 Dennd4b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062020.1 MGP_129S1SvImJ_G0027460.1 mouse_genomes_project 3 90565095 90567777 + MGP_129S1SvImJ_P0062020 Dennd4b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062021.1 MGP_129S1SvImJ_G0027460.1 mouse_genomes_project 3 90571539 90573556 + MGP_129S1SvImJ_P0062021 Dennd4b protein_coding protein_coding MGP_129S1SvImJ_T0062022.1 MGP_129S1SvImJ_G0027460.1 mouse_genomes_project 3 90573480 90574421 + Dennd4b protein_coding retained_intron MGP_129S1SvImJ_T0062023.1 MGP_129S1SvImJ_G0027460.1 mouse_genomes_project 3 90574085 90574748 + Dennd4b protein_coding retained_intron MGP_129S1SvImJ_T0060894.1 MGP_129S1SvImJ_G0027224.1 mouse_genomes_project 3 54195196 54205422 - MGP_129S1SvImJ_P0060894 Gm21954 protein_coding protein_coding MGP_129S1SvImJ_T0007551.1 MGP_129S1SvImJ_G0006185.1 mouse_genomes_project 3 51066721 51101518 + Gm30173 lincRNA lincRNA MGP_129S1SvImJ_T0098869.1 MGP_129S1SvImJ_G0036948.1 mouse_genomes_project 3 85562793 85580672 - Gm15535 sense_intronic sense_intronic MGP_129S1SvImJ_T0098870.1 MGP_129S1SvImJ_G0036948.1 mouse_genomes_project 3 85564926 85580581 - Gm15535 sense_intronic sense_intronic MGP_129S1SvImJ_T0060055.1 MGP_129S1SvImJ_G0027064.1 mouse_genomes_project 3 7214234 7278786 - MGP_129S1SvImJ_P0060055 Fabp12 protein_coding protein_coding MGP_129S1SvImJ_T0060056.1 MGP_129S1SvImJ_G0027064.1 mouse_genomes_project 3 7215943 7225537 - MGP_129S1SvImJ_P0060056 Fabp12 protein_coding protein_coding MGP_129S1SvImJ_T0060057.1 MGP_129S1SvImJ_G0027064.1 mouse_genomes_project 3 7215943 7225510 - MGP_129S1SvImJ_P0060057 Fabp12 protein_coding protein_coding MGP_129S1SvImJ_T0060058.1 MGP_129S1SvImJ_G0027064.1 mouse_genomes_project 3 7215976 7278777 - MGP_129S1SvImJ_P0060058 Fabp12 protein_coding protein_coding MGP_129S1SvImJ_T0063997.1 MGP_129S1SvImJ_G0027924.1 mouse_genomes_project 3 141133721 141174802 - MGP_129S1SvImJ_P0063997 Mttp protein_coding protein_coding MGP_129S1SvImJ_T0063998.1 MGP_129S1SvImJ_G0027924.1 mouse_genomes_project 3 141133736 141190281 - MGP_129S1SvImJ_P0063998 Mttp protein_coding unknown_likely_coding MGP_129S1SvImJ_T0063999.1 MGP_129S1SvImJ_G0027924.1 mouse_genomes_project 3 141134914 141190246 - MGP_129S1SvImJ_P0063999 Mttp protein_coding protein_coding MGP_129S1SvImJ_T0064000.1 MGP_129S1SvImJ_G0027924.1 mouse_genomes_project 3 141189120 141193942 - Mttp protein_coding retained_intron MGP_129S1SvImJ_T0010557.1 MGP_129S1SvImJ_G0008673.1 mouse_genomes_project 3 110649548 110649662 + Gm44384 miRNA miRNA MGP_129S1SvImJ_T0060092.1 MGP_129S1SvImJ_G0027074.1 mouse_genomes_project 3 11705259 11732532 + MGP_129S1SvImJ_P0060092 E2f5 protein_coding protein_coding MGP_129S1SvImJ_T0060093.1 MGP_129S1SvImJ_G0027074.1 mouse_genomes_project 3 11705289 11732531 + MGP_129S1SvImJ_P0060093 E2f5 protein_coding protein_coding MGP_129S1SvImJ_T0014069.1 MGP_129S1SvImJ_G0012158.1 mouse_genomes_project 3 56321882 56322432 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062755.1 MGP_129S1SvImJ_G0027670.1 mouse_genomes_project 3 102058649 102069412 + MGP_129S1SvImJ_P0062755 Trim45 protein_coding protein_coding MGP_129S1SvImJ_T0062756.1 MGP_129S1SvImJ_G0027670.1 mouse_genomes_project 3 102058922 102071721 + MGP_129S1SvImJ_P0062756 Trim45 protein_coding protein_coding MGP_129S1SvImJ_T0062757.1 MGP_129S1SvImJ_G0027670.1 mouse_genomes_project 3 102058940 102074630 + MGP_129S1SvImJ_P0062757 Trim45 protein_coding protein_coding MGP_129S1SvImJ_T0062758.1 MGP_129S1SvImJ_G0027670.1 mouse_genomes_project 3 102059359 102069767 + MGP_129S1SvImJ_P0062758 Trim45 protein_coding protein_coding MGP_129S1SvImJ_T0001307.1 MGP_129S1SvImJ_G0001231.1 mouse_genomes_project 3 111861183 111861950 - TEC TEC MGP_129S1SvImJ_T0063052.1 MGP_129S1SvImJ_G0027734.1 mouse_genomes_project 3 107968296 108017163 - MGP_129S1SvImJ_P0063052 Cept1 protein_coding protein_coding MGP_129S1SvImJ_T0063053.1 MGP_129S1SvImJ_G0027734.1 mouse_genomes_project 3 107969019 108017092 - MGP_129S1SvImJ_P0063053 Cept1 protein_coding protein_coding MGP_129S1SvImJ_T0063054.1 MGP_129S1SvImJ_G0027734.1 mouse_genomes_project 3 107969019 108016943 - MGP_129S1SvImJ_P0063054 Cept1 protein_coding protein_coding MGP_129S1SvImJ_T0063055.1 MGP_129S1SvImJ_G0027734.1 mouse_genomes_project 3 107971290 108017060 - MGP_129S1SvImJ_P0063055 Cept1 protein_coding protein_coding MGP_129S1SvImJ_T0063056.1 MGP_129S1SvImJ_G0027734.1 mouse_genomes_project 3 107987373 108017104 - MGP_129S1SvImJ_P0063056 Cept1 protein_coding protein_coding MGP_129S1SvImJ_T0063057.1 MGP_129S1SvImJ_G0027734.1 mouse_genomes_project 3 107999593 108017079 - MGP_129S1SvImJ_P0063057 Cept1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063058.1 MGP_129S1SvImJ_G0027734.1 mouse_genomes_project 3 108008708 108016953 - MGP_129S1SvImJ_P0063058 Cept1 protein_coding protein_coding MGP_129S1SvImJ_T0007752.1 MGP_129S1SvImJ_G0006345.1 mouse_genomes_project 3 146931472 146973000 - Gm6260 lincRNA lincRNA MGP_129S1SvImJ_T0007753.1 MGP_129S1SvImJ_G0006345.1 mouse_genomes_project 3 146953961 146973067 - Gm6260 lincRNA lincRNA MGP_129S1SvImJ_T0062427.1 MGP_129S1SvImJ_G0027586.1 mouse_genomes_project 3 96271947 96309672 + MGP_129S1SvImJ_P0062427 Ctss protein_coding protein_coding MGP_129S1SvImJ_T0062428.1 MGP_129S1SvImJ_G0027586.1 mouse_genomes_project 3 96272055 96309678 + MGP_129S1SvImJ_P0062428 Ctss protein_coding protein_coding MGP_129S1SvImJ_T0014098.1 MGP_129S1SvImJ_G0012187.1 mouse_genomes_project 3 63232945 63233194 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001373.1 MGP_129S1SvImJ_G0001296.1 mouse_genomes_project 3 134341208 134344552 - TEC TEC MGP_129S1SvImJ_T0063002.1 MGP_129S1SvImJ_G0027719.1 mouse_genomes_project 3 107079985 107096157 + MGP_129S1SvImJ_P0063002 Fam212b protein_coding protein_coding MGP_129S1SvImJ_T0063003.1 MGP_129S1SvImJ_G0027719.1 mouse_genomes_project 3 107080836 107093467 + MGP_129S1SvImJ_P0063003 Fam212b protein_coding protein_coding MGP_129S1SvImJ_T0007560.1 MGP_129S1SvImJ_G0006193.1 mouse_genomes_project 3 56410034 56423198 - Gm26671 lincRNA lincRNA MGP_129S1SvImJ_T0007561.1 MGP_129S1SvImJ_G0006193.1 mouse_genomes_project 3 56418413 56423259 - Gm26671 lincRNA lincRNA MGP_129S1SvImJ_T0007562.1 MGP_129S1SvImJ_G0006193.1 mouse_genomes_project 3 56418767 56423229 - Gm26671 lincRNA lincRNA MGP_129S1SvImJ_T0007563.1 MGP_129S1SvImJ_G0006193.1 mouse_genomes_project 3 56420332 56423265 - Gm26671 lincRNA lincRNA MGP_129S1SvImJ_T0060041.1 MGP_129S1SvImJ_G0027058.1 mouse_genomes_project 3 6612873 6766399 - MGP_129S1SvImJ_P0060041 Pag1 protein_coding protein_coding MGP_129S1SvImJ_T0060042.1 MGP_129S1SvImJ_G0027058.1 mouse_genomes_project 3 6617287 6766350 - MGP_129S1SvImJ_P0060042 Pag1 protein_coding protein_coding MGP_129S1SvImJ_T0060043.1 MGP_129S1SvImJ_G0027058.1 mouse_genomes_project 3 6618156 6630397 - Pag1 protein_coding retained_intron MGP_129S1SvImJ_T0060044.1 MGP_129S1SvImJ_G0027058.1 mouse_genomes_project 3 6678754 6766083 - Pag1 protein_coding retained_intron MGP_129S1SvImJ_T0060045.1 MGP_129S1SvImJ_G0027058.1 mouse_genomes_project 3 6760157 6766350 - Pag1 protein_coding processed_transcript MGP_129S1SvImJ_T0062932.1 MGP_129S1SvImJ_G0027704.1 mouse_genomes_project 3 105272666 105312255 + MGP_129S1SvImJ_P0062932 Phtf1 protein_coding protein_coding MGP_129S1SvImJ_T0062933.1 MGP_129S1SvImJ_G0027704.1 mouse_genomes_project 3 105272814 105312255 + MGP_129S1SvImJ_P0062933 Phtf1 protein_coding protein_coding MGP_129S1SvImJ_T0062934.1 MGP_129S1SvImJ_G0027704.1 mouse_genomes_project 3 105272922 105329930 + MGP_129S1SvImJ_P0062934 Phtf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062935.1 MGP_129S1SvImJ_G0027704.1 mouse_genomes_project 3 105272924 105312257 + MGP_129S1SvImJ_P0062935 Phtf1 protein_coding protein_coding MGP_129S1SvImJ_T0062936.1 MGP_129S1SvImJ_G0027704.1 mouse_genomes_project 3 105272928 105312255 + Phtf1 protein_coding retained_intron MGP_129S1SvImJ_T0062937.1 MGP_129S1SvImJ_G0027704.1 mouse_genomes_project 3 105272930 105295320 + MGP_129S1SvImJ_P0062937 Phtf1 protein_coding protein_coding MGP_129S1SvImJ_T0062938.1 MGP_129S1SvImJ_G0027704.1 mouse_genomes_project 3 105273002 105312257 + MGP_129S1SvImJ_P0062938 Phtf1 protein_coding protein_coding MGP_129S1SvImJ_T0062939.1 MGP_129S1SvImJ_G0027704.1 mouse_genomes_project 3 105273144 105291756 + MGP_129S1SvImJ_P0062939 Phtf1 protein_coding protein_coding MGP_129S1SvImJ_T0062940.1 MGP_129S1SvImJ_G0027704.1 mouse_genomes_project 3 105273481 105302288 + MGP_129S1SvImJ_P0062940 Phtf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062941.1 MGP_129S1SvImJ_G0027704.1 mouse_genomes_project 3 105301186 105302332 + Phtf1 protein_coding retained_intron MGP_129S1SvImJ_T0007509.1 MGP_129S1SvImJ_G0006157.1 mouse_genomes_project 3 33316995 33402312 - Gm6639 lincRNA lincRNA MGP_129S1SvImJ_T0007510.1 MGP_129S1SvImJ_G0006157.1 mouse_genomes_project 3 33336219 33402312 - Gm6639 lincRNA lincRNA MGP_129S1SvImJ_T0007511.1 MGP_129S1SvImJ_G0006157.1 mouse_genomes_project 3 33336410 33351873 - Gm6639 lincRNA lincRNA MGP_129S1SvImJ_T0007512.1 MGP_129S1SvImJ_G0006157.1 mouse_genomes_project 3 33351009 33361428 - Gm6639 lincRNA lincRNA MGP_129S1SvImJ_T0061400.1 MGP_129S1SvImJ_G0027348.1 mouse_genomes_project 3 85580853 85655730 + MGP_129S1SvImJ_P0061400 Gatb protein_coding protein_coding MGP_129S1SvImJ_T0061401.1 MGP_129S1SvImJ_G0027348.1 mouse_genomes_project 3 85580858 85582768 + Gatb protein_coding processed_transcript MGP_129S1SvImJ_T0061402.1 MGP_129S1SvImJ_G0027348.1 mouse_genomes_project 3 85580870 85661414 + MGP_129S1SvImJ_P0061402 Gatb protein_coding protein_coding MGP_129S1SvImJ_T0061403.1 MGP_129S1SvImJ_G0027348.1 mouse_genomes_project 3 85580921 85657055 + Gatb protein_coding processed_transcript MGP_129S1SvImJ_T0001206.1 MGP_129S1SvImJ_G0001132.1 mouse_genomes_project 3 49764821 49765237 - TEC TEC MGP_129S1SvImJ_T0064540.1 MGP_129S1SvImJ_G0028019.1 mouse_genomes_project 3 163748582 163771513 + MGP_129S1SvImJ_P0064540 Rpe65 protein_coding protein_coding MGP_129S1SvImJ_T0064541.1 MGP_129S1SvImJ_G0028019.1 mouse_genomes_project 3 163748625 163755830 + MGP_129S1SvImJ_P0064541 Rpe65 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064542.1 MGP_129S1SvImJ_G0028019.1 mouse_genomes_project 3 163748640 163770995 + MGP_129S1SvImJ_P0064542 Rpe65 protein_coding protein_coding MGP_129S1SvImJ_T0014022.1 MGP_129S1SvImJ_G0012111.1 mouse_genomes_project 3 38616231 38616531 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062129.1 MGP_129S1SvImJ_G0027502.1 mouse_genomes_project 3 93017131 93019965 - MGP_129S1SvImJ_P0062129 Ivl protein_coding protein_coding MGP_129S1SvImJ_T0064210.1 MGP_129S1SvImJ_G0027969.1 mouse_genomes_project 3 149710736 149777922 + MGP_129S1SvImJ_P0064210 Lpar3 protein_coding protein_coding MGP_129S1SvImJ_T0063863.1 MGP_129S1SvImJ_G0027899.1 mouse_genomes_project 3 136271096 136357067 - MGP_129S1SvImJ_P0063863 Tet2 protein_coding protein_coding MGP_129S1SvImJ_T0063864.1 MGP_129S1SvImJ_G0027899.1 mouse_genomes_project 3 136271100 136285298 - Tet2 protein_coding retained_intron MGP_129S1SvImJ_T0063865.1 MGP_129S1SvImJ_G0027899.1 mouse_genomes_project 3 136271256 136357045 - MGP_129S1SvImJ_P0063865 Tet2 protein_coding protein_coding MGP_129S1SvImJ_T0063866.1 MGP_129S1SvImJ_G0027899.1 mouse_genomes_project 3 136275191 136281162 - Tet2 protein_coding retained_intron MGP_129S1SvImJ_T0063867.1 MGP_129S1SvImJ_G0027899.1 mouse_genomes_project 3 136276871 136287033 - MGP_129S1SvImJ_P0063867 Tet2 protein_coding protein_coding MGP_129S1SvImJ_T0063868.1 MGP_129S1SvImJ_G0027899.1 mouse_genomes_project 3 136285537 136289389 - Tet2 protein_coding retained_intron MGP_129S1SvImJ_T0063869.1 MGP_129S1SvImJ_G0027899.1 mouse_genomes_project 3 136289518 136291133 - Tet2 protein_coding retained_intron MGP_129S1SvImJ_T0063870.1 MGP_129S1SvImJ_G0027899.1 mouse_genomes_project 3 136298975 136357816 - MGP_129S1SvImJ_P0063870 Tet2 protein_coding protein_coding MGP_129S1SvImJ_T0063871.1 MGP_129S1SvImJ_G0027899.1 mouse_genomes_project 3 136324112 136356979 - Tet2 protein_coding retained_intron MGP_129S1SvImJ_T0063872.1 MGP_129S1SvImJ_G0027899.1 mouse_genomes_project 3 136351440 136356963 - Tet2 protein_coding processed_transcript MGP_129S1SvImJ_T0007574.1 MGP_129S1SvImJ_G0006202.1 mouse_genomes_project 3 66729241 66731498 - 4930402C01Rik lincRNA lincRNA MGP_129S1SvImJ_T0014259.1 MGP_129S1SvImJ_G0012348.1 mouse_genomes_project 3 110463958 110464109 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060534.1 MGP_129S1SvImJ_G0027162.1 mouse_genomes_project 3 34376422 34424148 - MGP_129S1SvImJ_P0060534 Bbs7 protein_coding protein_coding MGP_129S1SvImJ_T0060535.1 MGP_129S1SvImJ_G0027162.1 mouse_genomes_project 3 34376422 34424236 - MGP_129S1SvImJ_P0060535 Bbs7 protein_coding protein_coding MGP_129S1SvImJ_T0060536.1 MGP_129S1SvImJ_G0027162.1 mouse_genomes_project 3 34378153 34424044 - MGP_129S1SvImJ_P0060536 Bbs7 protein_coding protein_coding MGP_129S1SvImJ_T0060537.1 MGP_129S1SvImJ_G0027162.1 mouse_genomes_project 3 34379064 34380576 - Bbs7 protein_coding retained_intron MGP_129S1SvImJ_T0060538.1 MGP_129S1SvImJ_G0027162.1 mouse_genomes_project 3 34419406 34424148 - Bbs7 protein_coding retained_intron MGP_129S1SvImJ_T0060539.1 MGP_129S1SvImJ_G0027162.1 mouse_genomes_project 3 34420233 34424148 - MGP_129S1SvImJ_P0060539 Bbs7 protein_coding protein_coding MGP_129S1SvImJ_T0061387.1 MGP_129S1SvImJ_G0027344.1 mouse_genomes_project 3 84408756 85907905 - MGP_129S1SvImJ_P0061387 protein_coding protein_coding MGP_129S1SvImJ_T0061408.1 MGP_129S1SvImJ_G0027344.1 mouse_genomes_project 3 85816575 85907907 - protein_coding processed_transcript MGP_129S1SvImJ_T0061409.1 MGP_129S1SvImJ_G0027344.1 mouse_genomes_project 3 85832672 85907757 - protein_coding retained_intron MGP_129S1SvImJ_T0064147.1 MGP_129S1SvImJ_G0027956.1 mouse_genomes_project 3 148401121 148432460 - MGP_129S1SvImJ_P0064147 Clca1 protein_coding protein_coding MGP_129S1SvImJ_T0064148.1 MGP_129S1SvImJ_G0027956.1 mouse_genomes_project 3 148401861 148406478 - Clca1 protein_coding processed_transcript MGP_129S1SvImJ_T0064149.1 MGP_129S1SvImJ_G0027956.1 mouse_genomes_project 3 148411265 148416230 - Clca1 protein_coding processed_transcript MGP_129S1SvImJ_T0060584.1 MGP_129S1SvImJ_G0027170.1 mouse_genomes_project 3 35200283 35253960 + MGP_129S1SvImJ_P0060584 Fgf2 protein_coding protein_coding MGP_129S1SvImJ_T0060585.1 MGP_129S1SvImJ_G0027170.1 mouse_genomes_project 3 35200590 35258666 + MGP_129S1SvImJ_P0060585 Fgf2 protein_coding protein_coding MGP_129S1SvImJ_T0060586.1 MGP_129S1SvImJ_G0027170.1 mouse_genomes_project 3 35200787 35253384 + MGP_129S1SvImJ_P0060586 Fgf2 protein_coding protein_coding MGP_129S1SvImJ_T0060587.1 MGP_129S1SvImJ_G0027170.1 mouse_genomes_project 3 35220941 35253384 + Fgf2 protein_coding processed_transcript MGP_129S1SvImJ_T0060588.1 MGP_129S1SvImJ_G0027170.1 mouse_genomes_project 3 35234541 35253384 + Fgf2 protein_coding processed_transcript MGP_129S1SvImJ_T0060589.1 MGP_129S1SvImJ_G0027170.1 mouse_genomes_project 3 35234637 35253384 + MGP_129S1SvImJ_P0060589 Fgf2 protein_coding protein_coding MGP_129S1SvImJ_T0060590.1 MGP_129S1SvImJ_G0027170.1 mouse_genomes_project 3 35234637 35253384 + MGP_129S1SvImJ_P0060590 Fgf2 protein_coding protein_coding MGP_129S1SvImJ_T0060591.1 MGP_129S1SvImJ_G0027170.1 mouse_genomes_project 3 35253127 35253384 + Fgf2 protein_coding retained_intron MGP_129S1SvImJ_T0101033.1 MGP_129S1SvImJ_G0039100.1 mouse_genomes_project 3 75191439 75191574 + Gm25846 snoRNA snoRNA MGP_129S1SvImJ_T0101028.1 MGP_129S1SvImJ_G0039095.1 mouse_genomes_project 3 63385208 63385366 - Gm23897 snoRNA snoRNA MGP_129S1SvImJ_T0004249.1 MGP_129S1SvImJ_G0003742.1 mouse_genomes_project 3 43584777 43611841 - 1700027H10Rik antisense antisense MGP_129S1SvImJ_T0014382.1 MGP_129S1SvImJ_G0012471.1 mouse_genomes_project 3 155795656 155796134 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014233.1 MGP_129S1SvImJ_G0012322.1 mouse_genomes_project 3 103623662 103624130 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061066.1 MGP_129S1SvImJ_G0027268.1 mouse_genomes_project 3 63190363 63206907 - MGP_129S1SvImJ_P0061066 protein_coding protein_coding MGP_129S1SvImJ_T0001403.1 MGP_129S1SvImJ_G0001326.1 mouse_genomes_project 3 156864767 156865752 + TEC TEC MGP_129S1SvImJ_T0063068.1 MGP_129S1SvImJ_G0027736.1 mouse_genomes_project 3 108141184 108194669 + MGP_129S1SvImJ_P0063068 Lrif1 protein_coding protein_coding MGP_129S1SvImJ_T0063069.1 MGP_129S1SvImJ_G0027736.1 mouse_genomes_project 3 108141195 108190963 + Lrif1 protein_coding processed_transcript MGP_129S1SvImJ_T0063070.1 MGP_129S1SvImJ_G0027736.1 mouse_genomes_project 3 108178331 108190976 + MGP_129S1SvImJ_P0063070 Lrif1 protein_coding protein_coding MGP_129S1SvImJ_T0063071.1 MGP_129S1SvImJ_G0027736.1 mouse_genomes_project 3 108178496 108195342 + MGP_129S1SvImJ_P0063071 Lrif1 protein_coding protein_coding MGP_129S1SvImJ_T0063072.1 MGP_129S1SvImJ_G0027736.1 mouse_genomes_project 3 108178496 108193147 + MGP_129S1SvImJ_P0063072 Lrif1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063073.1 MGP_129S1SvImJ_G0027736.1 mouse_genomes_project 3 108178511 108190814 + MGP_129S1SvImJ_P0063073 Lrif1 protein_coding protein_coding MGP_129S1SvImJ_T0063074.1 MGP_129S1SvImJ_G0027736.1 mouse_genomes_project 3 108178528 108193383 + Lrif1 protein_coding retained_intron MGP_129S1SvImJ_T0063075.1 MGP_129S1SvImJ_G0027736.1 mouse_genomes_project 3 108178529 108185427 + Lrif1 protein_coding retained_intron MGP_129S1SvImJ_T0063076.1 MGP_129S1SvImJ_G0027736.1 mouse_genomes_project 3 108178529 108192352 + Lrif1 protein_coding processed_transcript MGP_129S1SvImJ_T0063077.1 MGP_129S1SvImJ_G0027736.1 mouse_genomes_project 3 108178539 108195339 + MGP_129S1SvImJ_P0063077 Lrif1 protein_coding protein_coding MGP_129S1SvImJ_T0063078.1 MGP_129S1SvImJ_G0027736.1 mouse_genomes_project 3 108178570 108190828 + MGP_129S1SvImJ_P0063078 Lrif1 protein_coding protein_coding MGP_129S1SvImJ_T0063079.1 MGP_129S1SvImJ_G0027736.1 mouse_genomes_project 3 108191678 108192592 + Lrif1 protein_coding retained_intron MGP_129S1SvImJ_T0060767.1 MGP_129S1SvImJ_G0027200.1 mouse_genomes_project 3 50140883 50165396 + Mgst2 protein_coding processed_transcript MGP_129S1SvImJ_T0060768.1 MGP_129S1SvImJ_G0027200.1 mouse_genomes_project 3 50141704 50160623 + Mgst2 protein_coding processed_transcript MGP_129S1SvImJ_T0060769.1 MGP_129S1SvImJ_G0027200.1 mouse_genomes_project 3 50141705 50166265 + MGP_129S1SvImJ_P0060769 Mgst2 protein_coding protein_coding MGP_129S1SvImJ_T0060770.1 MGP_129S1SvImJ_G0027200.1 mouse_genomes_project 3 50141740 50166265 + MGP_129S1SvImJ_P0060770 Mgst2 protein_coding protein_coding MGP_129S1SvImJ_T0060771.1 MGP_129S1SvImJ_G0027200.1 mouse_genomes_project 3 50141751 50166259 + MGP_129S1SvImJ_P0060771 Mgst2 protein_coding protein_coding MGP_129S1SvImJ_T0060772.1 MGP_129S1SvImJ_G0027200.1 mouse_genomes_project 3 50153723 50166261 + Mgst2 protein_coding processed_transcript MGP_129S1SvImJ_T0060773.1 MGP_129S1SvImJ_G0027200.1 mouse_genomes_project 3 50154175 50166108 + Mgst2 protein_coding processed_transcript MGP_129S1SvImJ_T0060774.1 MGP_129S1SvImJ_G0027200.1 mouse_genomes_project 3 50158689 50166264 + Mgst2 protein_coding retained_intron MGP_129S1SvImJ_T0060775.1 MGP_129S1SvImJ_G0027200.1 mouse_genomes_project 3 50165205 50166267 + Mgst2 protein_coding retained_intron MGP_129S1SvImJ_T0007549.1 MGP_129S1SvImJ_G0006183.1 mouse_genomes_project 3 50686963 50694624 - Gm30074 lincRNA lincRNA MGP_129S1SvImJ_T0007741.1 MGP_129S1SvImJ_G0006335.1 mouse_genomes_project 3 146235951 146258957 + 4930519L02Rik lincRNA lincRNA MGP_129S1SvImJ_T0007497.1 MGP_129S1SvImJ_G0006147.1 mouse_genomes_project 3 31506865 31543464 - 4930431L21Rik lincRNA lincRNA MGP_129S1SvImJ_T0007498.1 MGP_129S1SvImJ_G0006147.1 mouse_genomes_project 3 31511026 31511994 - 4930431L21Rik lincRNA lincRNA MGP_129S1SvImJ_T0001296.1 MGP_129S1SvImJ_G0001220.1 mouse_genomes_project 3 99106069 99109132 + TEC TEC MGP_129S1SvImJ_T0060942.1 MGP_129S1SvImJ_G0027235.1 mouse_genomes_project 3 57360948 57367024 - MGP_129S1SvImJ_P0060942 Serp1 protein_coding protein_coding MGP_129S1SvImJ_T0007502.1 MGP_129S1SvImJ_G0006151.1 mouse_genomes_project 3 32155903 32156683 - Gm29135 lincRNA lincRNA MGP_129S1SvImJ_T0013960.1 MGP_129S1SvImJ_G0012049.1 mouse_genomes_project 3 15105699 15106616 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063614.1 MGP_129S1SvImJ_G0027856.1 mouse_genomes_project 3 128271704 128347736 - MGP_129S1SvImJ_P0063614 Ugt8a protein_coding protein_coding MGP_129S1SvImJ_T0063615.1 MGP_129S1SvImJ_G0027856.1 mouse_genomes_project 3 128271939 128321925 - MGP_129S1SvImJ_P0063615 Ugt8a protein_coding protein_coding MGP_129S1SvImJ_T0063616.1 MGP_129S1SvImJ_G0027856.1 mouse_genomes_project 3 128320305 128347668 - Ugt8a protein_coding retained_intron MGP_129S1SvImJ_T0102460.1 MGP_129S1SvImJ_G0040294.1 mouse_genomes_project 3 58380535 58480594 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099761.1 MGP_129S1SvImJ_G0037828.1 mouse_genomes_project 3 89282297 89282401 - Gm22935 snRNA snRNA MGP_129S1SvImJ_T0060521.1 MGP_129S1SvImJ_G0027160.1 mouse_genomes_project 3 34356028 34369047 + MGP_129S1SvImJ_P0060521 Exosc9 protein_coding protein_coding MGP_129S1SvImJ_T0060522.1 MGP_129S1SvImJ_G0027160.1 mouse_genomes_project 3 34356028 34366582 + MGP_129S1SvImJ_P0060522 Exosc9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060523.1 MGP_129S1SvImJ_G0027160.1 mouse_genomes_project 3 34356036 34360170 + Exosc9 protein_coding retained_intron MGP_129S1SvImJ_T0060524.1 MGP_129S1SvImJ_G0027160.1 mouse_genomes_project 3 34356049 34360389 + Exosc9 protein_coding retained_intron MGP_129S1SvImJ_T0060525.1 MGP_129S1SvImJ_G0027160.1 mouse_genomes_project 3 34356060 34360343 + MGP_129S1SvImJ_P0060525 Exosc9 protein_coding protein_coding MGP_129S1SvImJ_T0060526.1 MGP_129S1SvImJ_G0027160.1 mouse_genomes_project 3 34356073 34364827 + Exosc9 protein_coding retained_intron MGP_129S1SvImJ_T0060527.1 MGP_129S1SvImJ_G0027160.1 mouse_genomes_project 3 34358955 34366557 + MGP_129S1SvImJ_P0060527 Exosc9 protein_coding protein_coding MGP_129S1SvImJ_T0060528.1 MGP_129S1SvImJ_G0027160.1 mouse_genomes_project 3 34365614 34368965 + MGP_129S1SvImJ_P0060528 Exosc9 protein_coding protein_coding MGP_129S1SvImJ_T0004278.1 MGP_129S1SvImJ_G0003766.1 mouse_genomes_project 3 80813404 80816436 - Gm16000 antisense antisense MGP_129S1SvImJ_T0102501.1 MGP_129S1SvImJ_G0040335.1 mouse_genomes_project 3 107844102 107845204 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0007546.1 MGP_129S1SvImJ_G0006181.1 mouse_genomes_project 3 49846903 49854982 + Gm5103 lincRNA lincRNA MGP_129S1SvImJ_T0007547.1 MGP_129S1SvImJ_G0006181.1 mouse_genomes_project 3 49846955 49854989 + Gm5103 lincRNA lincRNA MGP_129S1SvImJ_T0064119.1 MGP_129S1SvImJ_G0027949.1 mouse_genomes_project 3 147467695 147481552 - MGP_129S1SvImJ_P0064119 Lmo4 protein_coding protein_coding MGP_129S1SvImJ_T0064120.1 MGP_129S1SvImJ_G0027949.1 mouse_genomes_project 3 147467695 147484160 - MGP_129S1SvImJ_P0064120 Lmo4 protein_coding protein_coding MGP_129S1SvImJ_T0064121.1 MGP_129S1SvImJ_G0027949.1 mouse_genomes_project 3 147467798 147481488 - MGP_129S1SvImJ_P0064121 Lmo4 protein_coding protein_coding MGP_129S1SvImJ_T0064122.1 MGP_129S1SvImJ_G0027949.1 mouse_genomes_project 3 147467849 147485590 - MGP_129S1SvImJ_P0064122 Lmo4 protein_coding protein_coding MGP_129S1SvImJ_T0064123.1 MGP_129S1SvImJ_G0027949.1 mouse_genomes_project 3 147468228 147473999 - Lmo4 protein_coding retained_intron MGP_129S1SvImJ_T0064124.1 MGP_129S1SvImJ_G0027949.1 mouse_genomes_project 3 147473165 147482117 - MGP_129S1SvImJ_P0064124 Lmo4 protein_coding protein_coding MGP_129S1SvImJ_T0064125.1 MGP_129S1SvImJ_G0027949.1 mouse_genomes_project 3 147479926 147485550 - Lmo4 protein_coding retained_intron MGP_129S1SvImJ_T0064126.1 MGP_129S1SvImJ_G0027949.1 mouse_genomes_project 3 147480778 147481456 - Lmo4 protein_coding retained_intron MGP_129S1SvImJ_T0098873.1 MGP_129S1SvImJ_G0036951.1 mouse_genomes_project 3 95114754 95116940 - Gm43773 sense_intronic sense_intronic MGP_129S1SvImJ_T0060573.1 MGP_129S1SvImJ_G0027166.1 mouse_genomes_project 3 34965374 34970738 - MGP_129S1SvImJ_P0060573 Il2 protein_coding protein_coding MGP_129S1SvImJ_T0061360.1 MGP_129S1SvImJ_G0027339.1 mouse_genomes_project 3 83985017 84054953 - MGP_129S1SvImJ_P0061360 Mnd1 protein_coding protein_coding MGP_129S1SvImJ_T0007595.1 MGP_129S1SvImJ_G0006219.1 mouse_genomes_project 3 80808939 80809791 + Gm42476 lincRNA lincRNA MGP_129S1SvImJ_T0062127.1 MGP_129S1SvImJ_G0027500.1 mouse_genomes_project 3 92952230 92952461 - MGP_129S1SvImJ_P0062127 Sprr4 protein_coding protein_coding MGP_129S1SvImJ_T0063945.1 MGP_129S1SvImJ_G0027911.1 mouse_genomes_project 3 138895707 138899852 - MGP_129S1SvImJ_P0063945 Scoc protein_coding protein_coding MGP_129S1SvImJ_T0001353.1 MGP_129S1SvImJ_G0001277.1 mouse_genomes_project 3 129716151 129722112 - TEC TEC MGP_129S1SvImJ_T0062596.1 MGP_129S1SvImJ_G0027628.1 mouse_genomes_project 3 97561656 97583023 + MGP_129S1SvImJ_P0062596 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062597.1 MGP_129S1SvImJ_G0027628.1 mouse_genomes_project 3 97561740 97583053 + MGP_129S1SvImJ_P0062597 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0062598.1 MGP_129S1SvImJ_G0027628.1 mouse_genomes_project 3 97572096 97575229 + protein_coding processed_transcript MGP_129S1SvImJ_T0014042.1 MGP_129S1SvImJ_G0012131.1 mouse_genomes_project 3 47592297 47592652 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062289.1 MGP_129S1SvImJ_G0027563.1 mouse_genomes_project 3 95654163 95686274 + MGP_129S1SvImJ_P0062289 Pi4kb protein_coding protein_coding MGP_129S1SvImJ_T0062290.1 MGP_129S1SvImJ_G0027563.1 mouse_genomes_project 3 95654263 95685578 + MGP_129S1SvImJ_P0062290 Pi4kb protein_coding protein_coding MGP_129S1SvImJ_T0062291.1 MGP_129S1SvImJ_G0027563.1 mouse_genomes_project 3 95654308 95685574 + MGP_129S1SvImJ_P0062291 Pi4kb protein_coding protein_coding MGP_129S1SvImJ_T0062292.1 MGP_129S1SvImJ_G0027563.1 mouse_genomes_project 3 95655550 95686212 + MGP_129S1SvImJ_P0062292 Pi4kb protein_coding protein_coding MGP_129S1SvImJ_T0062293.1 MGP_129S1SvImJ_G0027563.1 mouse_genomes_project 3 95655577 95675365 + MGP_129S1SvImJ_P0062293 Pi4kb protein_coding protein_coding MGP_129S1SvImJ_T0062294.1 MGP_129S1SvImJ_G0027563.1 mouse_genomes_project 3 95678349 95685607 + MGP_129S1SvImJ_P0062294 Pi4kb protein_coding protein_coding MGP_129S1SvImJ_T0062295.1 MGP_129S1SvImJ_G0027563.1 mouse_genomes_project 3 95683741 95685675 + Pi4kb protein_coding processed_transcript MGP_129S1SvImJ_T0060370.1 MGP_129S1SvImJ_G0027133.1 mouse_genomes_project 3 28735311 28854441 - MGP_129S1SvImJ_P0060370 Slc7a14 protein_coding protein_coding MGP_129S1SvImJ_T0060371.1 MGP_129S1SvImJ_G0027133.1 mouse_genomes_project 3 28760595 28797177 - MGP_129S1SvImJ_P0060371 Slc7a14 protein_coding protein_coding MGP_129S1SvImJ_T0014092.1 MGP_129S1SvImJ_G0012181.1 mouse_genomes_project 3 61760249 61760831 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014237.1 MGP_129S1SvImJ_G0012326.1 mouse_genomes_project 3 104111832 104112121 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060934.1 MGP_129S1SvImJ_G0027233.1 mouse_genomes_project 3 56637685 56643870 - MGP_129S1SvImJ_P0060934 Pfn2 protein_coding protein_coding MGP_129S1SvImJ_T0060935.1 MGP_129S1SvImJ_G0027233.1 mouse_genomes_project 3 56637695 56642936 - MGP_129S1SvImJ_P0060935 Pfn2 protein_coding protein_coding MGP_129S1SvImJ_T0060936.1 MGP_129S1SvImJ_G0027233.1 mouse_genomes_project 3 56638898 56641669 - MGP_129S1SvImJ_P0060936 Pfn2 protein_coding protein_coding MGP_129S1SvImJ_T0060937.1 MGP_129S1SvImJ_G0027233.1 mouse_genomes_project 3 56640451 56643340 - MGP_129S1SvImJ_P0060937 Pfn2 protein_coding protein_coding MGP_129S1SvImJ_T0014052.1 MGP_129S1SvImJ_G0012141.1 mouse_genomes_project 3 49837839 49838224 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098914.1 MGP_129S1SvImJ_G0036992.1 mouse_genomes_project 3 106147546 106149055 - Gm42658 sense_intronic sense_intronic MGP_129S1SvImJ_T0001395.1 MGP_129S1SvImJ_G0001318.1 mouse_genomes_project 3 154885258 154891256 - TEC TEC MGP_129S1SvImJ_T0099729.1 MGP_129S1SvImJ_G0037796.1 mouse_genomes_project 3 44018778 44018941 + Gm25796 snRNA snRNA MGP_129S1SvImJ_T0014358.1 MGP_129S1SvImJ_G0012447.1 mouse_genomes_project 3 142500983 142501427 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061067.1 MGP_129S1SvImJ_G0027269.1 mouse_genomes_project 3 63323322 63353514 - MGP_129S1SvImJ_P0061067 Vmn2r3 protein_coding protein_coding MGP_129S1SvImJ_T0014393.1 MGP_129S1SvImJ_G0012482.1 mouse_genomes_project 3 161547026 161547796 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062496.1 MGP_129S1SvImJ_G0027596.1 mouse_genomes_project 3 96643955 96652430 - MGP_129S1SvImJ_P0062496 protein_coding protein_coding MGP_129S1SvImJ_T0099795.1 MGP_129S1SvImJ_G0037862.1 mouse_genomes_project 3 140941961 140942060 - Gm25920 snRNA snRNA MGP_129S1SvImJ_T0014357.1 MGP_129S1SvImJ_G0012446.1 mouse_genomes_project 3 142225892 142226330 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001146.1 MGP_129S1SvImJ_G0001072.1 mouse_genomes_project 3 26638647 26640009 + TEC TEC MGP_129S1SvImJ_T0062070.1 MGP_129S1SvImJ_G0027468.1 mouse_genomes_project 3 90833759 90837970 - MGP_129S1SvImJ_P0062070 S100a1 protein_coding protein_coding MGP_129S1SvImJ_T0062071.1 MGP_129S1SvImJ_G0027468.1 mouse_genomes_project 3 90833762 90837856 - MGP_129S1SvImJ_P0062071 S100a1 protein_coding protein_coding MGP_129S1SvImJ_T0061497.1 MGP_129S1SvImJ_G0027370.1 mouse_genomes_project 3 87973471 87979488 + MGP_129S1SvImJ_P0061497 Sh2d2a protein_coding protein_coding MGP_129S1SvImJ_T0061498.1 MGP_129S1SvImJ_G0027370.1 mouse_genomes_project 3 87973721 87982429 + MGP_129S1SvImJ_P0061498 Sh2d2a protein_coding protein_coding MGP_129S1SvImJ_T0061499.1 MGP_129S1SvImJ_G0027370.1 mouse_genomes_project 3 87973727 87976653 + Sh2d2a protein_coding retained_intron MGP_129S1SvImJ_T0098929.1 MGP_129S1SvImJ_G0037007.1 mouse_genomes_project 3 157391960 157404303 - 1700015C17Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0062549.1 MGP_129S1SvImJ_G0027607.1 mouse_genomes_project 3 96993190 97007563 + MGP_129S1SvImJ_P0062549 Sv2a protein_coding protein_coding MGP_129S1SvImJ_T0062550.1 MGP_129S1SvImJ_G0027607.1 mouse_genomes_project 3 96998698 97000460 + Sv2a protein_coding retained_intron MGP_129S1SvImJ_T0062551.1 MGP_129S1SvImJ_G0027607.1 mouse_genomes_project 3 97004587 97007560 + Sv2a protein_coding processed_transcript MGP_129S1SvImJ_T0004293.1 MGP_129S1SvImJ_G0003776.1 mouse_genomes_project 3 89524848 89528317 + Gm15998 antisense antisense MGP_129S1SvImJ_T0010549.1 MGP_129S1SvImJ_G0008665.1 mouse_genomes_project 3 95683595 95683667 + Mir7013 miRNA miRNA MGP_129S1SvImJ_T0062578.1 MGP_129S1SvImJ_G0027623.1 mouse_genomes_project 3 97481474 97510335 + MGP_129S1SvImJ_P0062578 Lix1l protein_coding protein_coding MGP_129S1SvImJ_T0062579.1 MGP_129S1SvImJ_G0027623.1 mouse_genomes_project 3 97501569 97506393 + Lix1l protein_coding retained_intron MGP_129S1SvImJ_T0061279.1 MGP_129S1SvImJ_G0027318.1 mouse_genomes_project 3 79600998 79664212 + MGP_129S1SvImJ_P0061279 Fam198b protein_coding protein_coding MGP_129S1SvImJ_T0061280.1 MGP_129S1SvImJ_G0027318.1 mouse_genomes_project 3 79601062 79653988 + MGP_129S1SvImJ_P0061280 Fam198b protein_coding protein_coding MGP_129S1SvImJ_T0061281.1 MGP_129S1SvImJ_G0027318.1 mouse_genomes_project 3 79601396 79602690 + MGP_129S1SvImJ_P0061281 Fam198b protein_coding protein_coding MGP_129S1SvImJ_T0061282.1 MGP_129S1SvImJ_G0027318.1 mouse_genomes_project 3 79602376 79664210 + MGP_129S1SvImJ_P0061282 Fam198b protein_coding protein_coding MGP_129S1SvImJ_T0061283.1 MGP_129S1SvImJ_G0027318.1 mouse_genomes_project 3 79602502 79606092 + Fam198b protein_coding retained_intron MGP_129S1SvImJ_T0014169.1 MGP_129S1SvImJ_G0012258.1 mouse_genomes_project 3 87130304 87130833 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007609.1 MGP_129S1SvImJ_G0006232.1 mouse_genomes_project 3 88347419 88352908 - AI849053 lincRNA lincRNA MGP_129S1SvImJ_T0013995.1 MGP_129S1SvImJ_G0012084.1 mouse_genomes_project 3 31316494 31316852 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062721.1 MGP_129S1SvImJ_G0027661.1 mouse_genomes_project 3 99916959 99947874 - MGP_129S1SvImJ_P0062721 Hao2 protein_coding protein_coding MGP_129S1SvImJ_T0062138.1 MGP_129S1SvImJ_G0027509.1 mouse_genomes_project 3 93137379 93139051 + MGP_129S1SvImJ_P0062138 Lce1c protein_coding protein_coding MGP_129S1SvImJ_T0007516.1 MGP_129S1SvImJ_G0006161.1 mouse_genomes_project 3 35030061 35035770 + Gm12532 lincRNA lincRNA MGP_129S1SvImJ_T0099780.1 MGP_129S1SvImJ_G0037847.1 mouse_genomes_project 3 110052559 110052682 + Gm23336 snRNA snRNA MGP_129S1SvImJ_T0061540.1 MGP_129S1SvImJ_G0027380.1 mouse_genomes_project 3 88179252 88194249 + MGP_129S1SvImJ_P0061540 Gpatch4 protein_coding protein_coding MGP_129S1SvImJ_T0061541.1 MGP_129S1SvImJ_G0027380.1 mouse_genomes_project 3 88179252 88194246 + MGP_129S1SvImJ_P0061541 Gpatch4 protein_coding protein_coding MGP_129S1SvImJ_T0061542.1 MGP_129S1SvImJ_G0027380.1 mouse_genomes_project 3 88179253 88192916 + Gpatch4 protein_coding retained_intron MGP_129S1SvImJ_T0061543.1 MGP_129S1SvImJ_G0027380.1 mouse_genomes_project 3 88179268 88193456 + MGP_129S1SvImJ_P0061543 Gpatch4 protein_coding protein_coding MGP_129S1SvImJ_T0061544.1 MGP_129S1SvImJ_G0027380.1 mouse_genomes_project 3 88179272 88194232 + MGP_129S1SvImJ_P0061544 Gpatch4 protein_coding protein_coding MGP_129S1SvImJ_T0061774.1 MGP_129S1SvImJ_G0027420.1 mouse_genomes_project 3 89380680 89382213 + MGP_129S1SvImJ_P0061774 Fam189b protein_coding protein_coding MGP_129S1SvImJ_T0061775.1 MGP_129S1SvImJ_G0027420.1 mouse_genomes_project 3 89380740 89386782 + MGP_129S1SvImJ_P0061775 Fam189b protein_coding protein_coding MGP_129S1SvImJ_T0061776.1 MGP_129S1SvImJ_G0027420.1 mouse_genomes_project 3 89380741 89386780 + MGP_129S1SvImJ_P0061776 Fam189b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061777.1 MGP_129S1SvImJ_G0027420.1 mouse_genomes_project 3 89381117 89386781 + MGP_129S1SvImJ_P0061777 Fam189b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061778.1 MGP_129S1SvImJ_G0027420.1 mouse_genomes_project 3 89381170 89386779 + MGP_129S1SvImJ_P0061778 Fam189b protein_coding protein_coding MGP_129S1SvImJ_T0061779.1 MGP_129S1SvImJ_G0027420.1 mouse_genomes_project 3 89381178 89386786 + MGP_129S1SvImJ_P0061779 Fam189b protein_coding protein_coding MGP_129S1SvImJ_T0061780.1 MGP_129S1SvImJ_G0027420.1 mouse_genomes_project 3 89381766 89383303 + Fam189b protein_coding retained_intron MGP_129S1SvImJ_T0061781.1 MGP_129S1SvImJ_G0027420.1 mouse_genomes_project 3 89384866 89385968 + Fam189b protein_coding retained_intron MGP_129S1SvImJ_T0061782.1 MGP_129S1SvImJ_G0027420.1 mouse_genomes_project 3 89385424 89385967 + Fam189b protein_coding retained_intron MGP_129S1SvImJ_T0061783.1 MGP_129S1SvImJ_G0027420.1 mouse_genomes_project 3 89385474 89386271 + Fam189b protein_coding processed_transcript MGP_129S1SvImJ_T0001386.1 MGP_129S1SvImJ_G0001309.1 mouse_genomes_project 3 140924998 140927336 + TEC TEC MGP_129S1SvImJ_T0062772.1 MGP_129S1SvImJ_G0027675.1 mouse_genomes_project 3 102549955 102552413 + Igsf3 protein_coding retained_intron MGP_129S1SvImJ_T0062773.1 MGP_129S1SvImJ_G0027675.1 mouse_genomes_project 3 102549955 102639360 + MGP_129S1SvImJ_P0062773 Igsf3 protein_coding protein_coding MGP_129S1SvImJ_T0062774.1 MGP_129S1SvImJ_G0027675.1 mouse_genomes_project 3 102551210 102636460 + MGP_129S1SvImJ_P0062774 Igsf3 protein_coding protein_coding MGP_129S1SvImJ_T0007514.1 MGP_129S1SvImJ_G0006159.1 mouse_genomes_project 3 34300142 34307316 - Gm11548 lincRNA lincRNA MGP_129S1SvImJ_T0014082.1 MGP_129S1SvImJ_G0012171.1 mouse_genomes_project 3 58586147 58586289 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061345.1 MGP_129S1SvImJ_G0027336.1 mouse_genomes_project 3 83626521 83634509 + MGP_129S1SvImJ_P0061345 Sfrp2 protein_coding protein_coding MGP_129S1SvImJ_T0061346.1 MGP_129S1SvImJ_G0027336.1 mouse_genomes_project 3 83626765 83630328 + Sfrp2 protein_coding processed_transcript MGP_129S1SvImJ_T0061347.1 MGP_129S1SvImJ_G0027336.1 mouse_genomes_project 3 83627053 83632342 + Sfrp2 protein_coding processed_transcript MGP_129S1SvImJ_T0007759.1 MGP_129S1SvImJ_G0006350.1 mouse_genomes_project 3 147376110 147410299 - Gm42709 lincRNA lincRNA MGP_129S1SvImJ_T0062133.1 MGP_129S1SvImJ_G0027505.1 mouse_genomes_project 3 93072192 93073772 - MGP_129S1SvImJ_P0062133 Lce6a protein_coding protein_coding MGP_129S1SvImJ_T0062134.1 MGP_129S1SvImJ_G0027505.1 mouse_genomes_project 3 93072196 93073292 - MGP_129S1SvImJ_P0062134 Lce6a protein_coding protein_coding MGP_129S1SvImJ_T0063878.1 MGP_129S1SvImJ_G0027901.1 mouse_genomes_project 3 137688148 137791455 + MGP_129S1SvImJ_P0063878 Tacr3 protein_coding protein_coding MGP_129S1SvImJ_T0063172.1 MGP_129S1SvImJ_G0027765.1 mouse_genomes_project 3 109619385 109633806 + MGP_129S1SvImJ_P0063172 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0063173.1 MGP_129S1SvImJ_G0027765.1 mouse_genomes_project 3 109625477 109629388 + MGP_129S1SvImJ_P0063173 protein_coding protein_coding MGP_129S1SvImJ_T0063174.1 MGP_129S1SvImJ_G0027765.1 mouse_genomes_project 3 109625735 109631420 + MGP_129S1SvImJ_P0063174 protein_coding protein_coding MGP_129S1SvImJ_T0063175.1 MGP_129S1SvImJ_G0027765.1 mouse_genomes_project 3 109625789 109634433 + protein_coding retained_intron MGP_129S1SvImJ_T0063176.1 MGP_129S1SvImJ_G0027765.1 mouse_genomes_project 3 109627045 109631435 + MGP_129S1SvImJ_P0063176 protein_coding protein_coding MGP_129S1SvImJ_T0063177.1 MGP_129S1SvImJ_G0027765.1 mouse_genomes_project 3 109630245 109634294 + protein_coding processed_transcript MGP_129S1SvImJ_T0007500.1 MGP_129S1SvImJ_G0006149.1 mouse_genomes_project 3 32086625 32088293 + Gm43208 lincRNA lincRNA MGP_129S1SvImJ_T0014181.1 MGP_129S1SvImJ_G0012270.1 mouse_genomes_project 3 91386901 91387204 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061463.1 MGP_129S1SvImJ_G0027365.1 mouse_genomes_project 3 87728208 87812300 + Arhgef11 protein_coding retained_intron MGP_129S1SvImJ_T0061464.1 MGP_129S1SvImJ_G0027365.1 mouse_genomes_project 3 87728224 87854135 + MGP_129S1SvImJ_P0061464 Arhgef11 protein_coding protein_coding MGP_129S1SvImJ_T0061465.1 MGP_129S1SvImJ_G0027365.1 mouse_genomes_project 3 87728234 87852011 + MGP_129S1SvImJ_P0061465 Arhgef11 protein_coding protein_coding MGP_129S1SvImJ_T0061466.1 MGP_129S1SvImJ_G0027365.1 mouse_genomes_project 3 87728241 87833499 + Arhgef11 protein_coding retained_intron MGP_129S1SvImJ_T0061467.1 MGP_129S1SvImJ_G0027365.1 mouse_genomes_project 3 87728241 87853204 + MGP_129S1SvImJ_P0061467 Arhgef11 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0061468.1 MGP_129S1SvImJ_G0027365.1 mouse_genomes_project 3 87728750 87854136 + MGP_129S1SvImJ_P0061468 Arhgef11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0004327.1 MGP_129S1SvImJ_G0003799.1 mouse_genomes_project 3 98688721 98694559 + Gm43076 antisense antisense MGP_129S1SvImJ_T0004328.1 MGP_129S1SvImJ_G0003799.1 mouse_genomes_project 3 98688911 98691466 + Gm43076 antisense antisense MGP_129S1SvImJ_T0007654.1 MGP_129S1SvImJ_G0006263.1 mouse_genomes_project 3 103829202 103831423 + Gm42678 lincRNA lincRNA MGP_129S1SvImJ_T0063554.1 MGP_129S1SvImJ_G0027845.1 mouse_genomes_project 3 125225159 125289144 - MGP_129S1SvImJ_P0063554 Usp53 protein_coding protein_coding MGP_129S1SvImJ_T0063555.1 MGP_129S1SvImJ_G0027845.1 mouse_genomes_project 3 125247397 125249820 - Usp53 protein_coding retained_intron MGP_129S1SvImJ_T0063556.1 MGP_129S1SvImJ_G0027845.1 mouse_genomes_project 3 125251489 125288957 - MGP_129S1SvImJ_P0063556 Usp53 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063557.1 MGP_129S1SvImJ_G0027845.1 mouse_genomes_project 3 125252592 125289140 - MGP_129S1SvImJ_P0063557 Usp53 protein_coding protein_coding MGP_129S1SvImJ_T0063558.1 MGP_129S1SvImJ_G0027845.1 mouse_genomes_project 3 125255516 125289138 - MGP_129S1SvImJ_P0063558 Usp53 protein_coding protein_coding MGP_129S1SvImJ_T0063559.1 MGP_129S1SvImJ_G0027845.1 mouse_genomes_project 3 125258093 125289144 - Usp53 protein_coding retained_intron MGP_129S1SvImJ_T0063560.1 MGP_129S1SvImJ_G0027845.1 mouse_genomes_project 3 125261182 125263586 - Usp53 protein_coding retained_intron MGP_129S1SvImJ_T0063561.1 MGP_129S1SvImJ_G0027845.1 mouse_genomes_project 3 125261225 125289105 - MGP_129S1SvImJ_P0063561 Usp53 protein_coding protein_coding MGP_129S1SvImJ_T0063562.1 MGP_129S1SvImJ_G0027845.1 mouse_genomes_project 3 125261895 125265296 - Usp53 protein_coding retained_intron MGP_129S1SvImJ_T0063563.1 MGP_129S1SvImJ_G0027845.1 mouse_genomes_project 3 125269776 125288527 - Usp53 protein_coding retained_intron MGP_129S1SvImJ_T0001392.1 MGP_129S1SvImJ_G0001315.1 mouse_genomes_project 3 152062858 152063728 + TEC TEC MGP_129S1SvImJ_T0101053.1 MGP_129S1SvImJ_G0039120.1 mouse_genomes_project 3 104675162 104675264 + Gm25009 snoRNA snoRNA MGP_129S1SvImJ_T0004291.1 MGP_129S1SvImJ_G0003774.1 mouse_genomes_project 3 88998641 89000209 - antisense antisense MGP_129S1SvImJ_T0001390.1 MGP_129S1SvImJ_G0001313.1 mouse_genomes_project 3 149819085 149820403 + TEC TEC MGP_129S1SvImJ_T0007517.1 MGP_129S1SvImJ_G0006162.1 mouse_genomes_project 3 35476422 35477787 + 4930594O21Rik lincRNA lincRNA MGP_129S1SvImJ_T0007518.1 MGP_129S1SvImJ_G0006162.1 mouse_genomes_project 3 35476432 35477337 + 4930594O21Rik lincRNA lincRNA MGP_129S1SvImJ_T0064237.1 MGP_129S1SvImJ_G0027976.1 mouse_genomes_project 3 150107340 150143053 - MGP_129S1SvImJ_P0064237 Dnase2b protein_coding protein_coding MGP_129S1SvImJ_T0064238.1 MGP_129S1SvImJ_G0027976.1 mouse_genomes_project 3 150107340 150124058 - MGP_129S1SvImJ_P0064238 Dnase2b protein_coding protein_coding MGP_129S1SvImJ_T0013957.1 MGP_129S1SvImJ_G0012046.1 mouse_genomes_project 3 14392435 14392769 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007719.1 MGP_129S1SvImJ_G0006315.1 mouse_genomes_project 3 136619224 136621181 - Gm6135 lincRNA lincRNA MGP_129S1SvImJ_T0001211.1 MGP_129S1SvImJ_G0001137.1 mouse_genomes_project 3 50065433 50065975 + TEC TEC MGP_129S1SvImJ_T0060059.1 MGP_129S1SvImJ_G0027065.1 mouse_genomes_project 3 7292792 7312276 - MGP_129S1SvImJ_P0060059 Impa1 protein_coding protein_coding MGP_129S1SvImJ_T0060060.1 MGP_129S1SvImJ_G0027065.1 mouse_genomes_project 3 7294790 7312276 - MGP_129S1SvImJ_P0060060 Impa1 protein_coding protein_coding MGP_129S1SvImJ_T0060061.1 MGP_129S1SvImJ_G0027065.1 mouse_genomes_project 3 7295954 7297489 - Impa1 protein_coding retained_intron MGP_129S1SvImJ_T0060062.1 MGP_129S1SvImJ_G0027065.1 mouse_genomes_project 3 7296022 7312483 - MGP_129S1SvImJ_P0060062 Impa1 protein_coding protein_coding MGP_129S1SvImJ_T0060064.1 MGP_129S1SvImJ_G0027065.1 mouse_genomes_project 3 7307018 7311969 - MGP_129S1SvImJ_P0060064 Impa1 protein_coding protein_coding MGP_129S1SvImJ_T0063724.1 MGP_129S1SvImJ_G0027871.1 mouse_genomes_project 3 132340863 132423833 - MGP_129S1SvImJ_P0063724 Egf protein_coding protein_coding MGP_129S1SvImJ_T0063725.1 MGP_129S1SvImJ_G0027871.1 mouse_genomes_project 3 132340876 132392555 - MGP_129S1SvImJ_P0063725 Egf protein_coding protein_coding MGP_129S1SvImJ_T0063726.1 MGP_129S1SvImJ_G0027871.1 mouse_genomes_project 3 132340878 132392545 - MGP_129S1SvImJ_P0063726 Egf protein_coding protein_coding MGP_129S1SvImJ_T0063727.1 MGP_129S1SvImJ_G0027871.1 mouse_genomes_project 3 132341635 132344863 - Egf protein_coding retained_intron MGP_129S1SvImJ_T0063728.1 MGP_129S1SvImJ_G0027871.1 mouse_genomes_project 3 132349567 132359562 - Egf protein_coding retained_intron MGP_129S1SvImJ_T0063729.1 MGP_129S1SvImJ_G0027871.1 mouse_genomes_project 3 132358843 132361753 - Egf protein_coding retained_intron MGP_129S1SvImJ_T0063730.1 MGP_129S1SvImJ_G0027871.1 mouse_genomes_project 3 132365936 132392554 - MGP_129S1SvImJ_P0063730 Egf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063731.1 MGP_129S1SvImJ_G0027871.1 mouse_genomes_project 3 132402912 132423833 - Egf protein_coding retained_intron MGP_129S1SvImJ_T0063732.1 MGP_129S1SvImJ_G0027871.1 mouse_genomes_project 3 132404384 132423833 - Egf protein_coding processed_transcript MGP_129S1SvImJ_T0010510.1 MGP_129S1SvImJ_G0008626.1 mouse_genomes_project 3 301176 301255 + Gm23237 miRNA miRNA MGP_129S1SvImJ_T0060979.1 MGP_129S1SvImJ_G0027246.1 mouse_genomes_project 3 58095324 58106639 - MGP_129S1SvImJ_P0060979 P2ry12 protein_coding protein_coding MGP_129S1SvImJ_T0060980.1 MGP_129S1SvImJ_G0027246.1 mouse_genomes_project 3 58095411 58142155 - MGP_129S1SvImJ_P0060980 P2ry12 protein_coding protein_coding MGP_129S1SvImJ_T0060981.1 MGP_129S1SvImJ_G0027246.1 mouse_genomes_project 3 58095412 58099312 - MGP_129S1SvImJ_P0060981 P2ry12 protein_coding protein_coding MGP_129S1SvImJ_T0060982.1 MGP_129S1SvImJ_G0027246.1 mouse_genomes_project 3 58095413 58142195 - MGP_129S1SvImJ_P0060982 P2ry12 protein_coding protein_coding MGP_129S1SvImJ_T0060983.1 MGP_129S1SvImJ_G0027246.1 mouse_genomes_project 3 58096957 58099253 - MGP_129S1SvImJ_P0060983 P2ry12 protein_coding protein_coding MGP_129S1SvImJ_T0061196.1 MGP_129S1SvImJ_G0027298.1 mouse_genomes_project 3 69092943 69128606 - MGP_129S1SvImJ_P0061196 Sptssb protein_coding protein_coding MGP_129S1SvImJ_T0061197.1 MGP_129S1SvImJ_G0027298.1 mouse_genomes_project 3 69093979 69128588 - MGP_129S1SvImJ_P0061197 Sptssb protein_coding protein_coding MGP_129S1SvImJ_T0004274.1 MGP_129S1SvImJ_G0003762.1 mouse_genomes_project 3 65091962 65096241 + Gm37305 antisense antisense MGP_129S1SvImJ_T0014021.1 MGP_129S1SvImJ_G0012110.1 mouse_genomes_project 3 37767326 37767606 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010546.1 MGP_129S1SvImJ_G0008662.1 mouse_genomes_project 3 92423231 92423341 - Gm23697 miRNA miRNA MGP_129S1SvImJ_T0101036.1 MGP_129S1SvImJ_G0039103.1 mouse_genomes_project 3 81670122 81670262 + Gm22531 snoRNA snoRNA MGP_129S1SvImJ_T0064047.1 MGP_129S1SvImJ_G0027935.1 mouse_genomes_project 3 142003466 142169147 - MGP_129S1SvImJ_P0064047 Rap1gds1 protein_coding protein_coding MGP_129S1SvImJ_T0064048.1 MGP_129S1SvImJ_G0027935.1 mouse_genomes_project 3 142003470 142169083 - MGP_129S1SvImJ_P0064048 Rap1gds1 protein_coding protein_coding MGP_129S1SvImJ_T0064049.1 MGP_129S1SvImJ_G0027935.1 mouse_genomes_project 3 142003474 142169016 - MGP_129S1SvImJ_P0064049 Rap1gds1 protein_coding protein_coding MGP_129S1SvImJ_T0064050.1 MGP_129S1SvImJ_G0027935.1 mouse_genomes_project 3 142021476 142169086 - MGP_129S1SvImJ_P0064050 Rap1gds1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064051.1 MGP_129S1SvImJ_G0027935.1 mouse_genomes_project 3 142021479 142169094 - MGP_129S1SvImJ_P0064051 Rap1gds1 protein_coding protein_coding MGP_129S1SvImJ_T0064052.1 MGP_129S1SvImJ_G0027935.1 mouse_genomes_project 3 142038690 142067623 - Rap1gds1 protein_coding retained_intron MGP_129S1SvImJ_T0064053.1 MGP_129S1SvImJ_G0027935.1 mouse_genomes_project 3 142104498 142169139 - Rap1gds1 protein_coding retained_intron MGP_129S1SvImJ_T0064054.1 MGP_129S1SvImJ_G0027935.1 mouse_genomes_project 3 142111803 142168744 - Rap1gds1 protein_coding processed_transcript MGP_129S1SvImJ_T0064055.1 MGP_129S1SvImJ_G0027935.1 mouse_genomes_project 3 142143967 142169086 - Rap1gds1 protein_coding retained_intron MGP_129S1SvImJ_T0014279.1 MGP_129S1SvImJ_G0012368.1 mouse_genomes_project 3 116654951 116655603 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102480.1 MGP_129S1SvImJ_G0040314.1 mouse_genomes_project 3 94262673 94356576 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0014189.1 MGP_129S1SvImJ_G0012278.1 mouse_genomes_project 3 93642163 93642854 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014116.1 MGP_129S1SvImJ_G0012205.1 mouse_genomes_project 3 68570794 68571335 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004263.1 MGP_129S1SvImJ_G0003753.1 mouse_genomes_project 3 57870839 57874525 - Gm43570 antisense antisense MGP_129S1SvImJ_T0007672.1 MGP_129S1SvImJ_G0006278.1 mouse_genomes_project 3 110670159 110671986 - 4930408K08Rik lincRNA lincRNA MGP_129S1SvImJ_T0013984.1 MGP_129S1SvImJ_G0012073.1 mouse_genomes_project 3 24350010 24351175 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063019.1 MGP_129S1SvImJ_G0027724.1 mouse_genomes_project 3 107331700 107349102 - MGP_129S1SvImJ_P0063019 Atp5f1 protein_coding protein_coding MGP_129S1SvImJ_T0063020.1 MGP_129S1SvImJ_G0027724.1 mouse_genomes_project 3 107331704 107348279 - MGP_129S1SvImJ_P0063020 Atp5f1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063021.1 MGP_129S1SvImJ_G0027724.1 mouse_genomes_project 3 107331900 107343184 - MGP_129S1SvImJ_P0063021 Atp5f1 protein_coding protein_coding MGP_129S1SvImJ_T0063022.1 MGP_129S1SvImJ_G0027724.1 mouse_genomes_project 3 107342671 107348267 - Atp5f1 protein_coding retained_intron MGP_129S1SvImJ_T0063023.1 MGP_129S1SvImJ_G0027724.1 mouse_genomes_project 3 107342829 107345009 - Atp5f1 protein_coding retained_intron MGP_129S1SvImJ_T0063024.1 MGP_129S1SvImJ_G0027724.1 mouse_genomes_project 3 107347593 107348249 - Atp5f1 protein_coding retained_intron MGP_129S1SvImJ_T0062105.1 MGP_129S1SvImJ_G0027481.1 mouse_genomes_project 3 91069976 91083797 + MGP_129S1SvImJ_P0062105 Pglyrp4 protein_coding protein_coding MGP_129S1SvImJ_T0062106.1 MGP_129S1SvImJ_G0027481.1 mouse_genomes_project 3 91069981 91082794 + MGP_129S1SvImJ_P0062106 Pglyrp4 protein_coding protein_coding MGP_129S1SvImJ_T0062107.1 MGP_129S1SvImJ_G0027481.1 mouse_genomes_project 3 91080239 91083795 + Pglyrp4 protein_coding processed_transcript MGP_129S1SvImJ_T0007467.1 MGP_129S1SvImJ_G0006125.1 mouse_genomes_project 3 10527579 10530270 - Gm2464 lincRNA lincRNA MGP_129S1SvImJ_T0013953.1 MGP_129S1SvImJ_G0012042.1 mouse_genomes_project 3 12124817 12125801 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007739.1 MGP_129S1SvImJ_G0006333.1 mouse_genomes_project 3 144098076 144099445 + 4930590L14Rik lincRNA lincRNA MGP_129S1SvImJ_T0063709.1 MGP_129S1SvImJ_G0027868.1 mouse_genomes_project 3 131830576 131850260 + MGP_129S1SvImJ_P0063709 Pitx2 protein_coding protein_coding MGP_129S1SvImJ_T0063710.1 MGP_129S1SvImJ_G0027868.1 mouse_genomes_project 3 131830620 131850248 + MGP_129S1SvImJ_P0063710 Pitx2 protein_coding protein_coding MGP_129S1SvImJ_T0063711.1 MGP_129S1SvImJ_G0027868.1 mouse_genomes_project 3 131830624 131850261 + MGP_129S1SvImJ_P0063711 Pitx2 protein_coding protein_coding MGP_129S1SvImJ_T0063712.1 MGP_129S1SvImJ_G0027868.1 mouse_genomes_project 3 131830667 131835276 + MGP_129S1SvImJ_P0063712 Pitx2 protein_coding protein_coding MGP_129S1SvImJ_T0063713.1 MGP_129S1SvImJ_G0027868.1 mouse_genomes_project 3 131834645 131849567 + MGP_129S1SvImJ_P0063713 Pitx2 protein_coding protein_coding MGP_129S1SvImJ_T0063714.1 MGP_129S1SvImJ_G0027868.1 mouse_genomes_project 3 131844601 131847444 + Pitx2 protein_coding retained_intron MGP_129S1SvImJ_T0063715.1 MGP_129S1SvImJ_G0027868.1 mouse_genomes_project 3 131844641 131850258 + MGP_129S1SvImJ_P0063715 Pitx2 protein_coding protein_coding MGP_129S1SvImJ_T0063716.1 MGP_129S1SvImJ_G0027868.1 mouse_genomes_project 3 131844944 131847294 + MGP_129S1SvImJ_P0063716 Pitx2 protein_coding protein_coding MGP_129S1SvImJ_T0001142.1 MGP_129S1SvImJ_G0001068.1 mouse_genomes_project 3 22384982 22385176 + TEC TEC MGP_129S1SvImJ_T0063569.1 MGP_129S1SvImJ_G0027847.1 mouse_genomes_project 3 125388552 125549449 - MGP_129S1SvImJ_P0063569 Synpo2 protein_coding protein_coding MGP_129S1SvImJ_T0063570.1 MGP_129S1SvImJ_G0027847.1 mouse_genomes_project 3 125388552 125425834 - MGP_129S1SvImJ_P0063570 Synpo2 protein_coding protein_coding MGP_129S1SvImJ_T0063571.1 MGP_129S1SvImJ_G0027847.1 mouse_genomes_project 3 125388552 125549500 - MGP_129S1SvImJ_P0063571 Synpo2 protein_coding protein_coding MGP_129S1SvImJ_T0063572.1 MGP_129S1SvImJ_G0027847.1 mouse_genomes_project 3 125419618 125549500 - MGP_129S1SvImJ_P0063572 Synpo2 protein_coding protein_coding MGP_129S1SvImJ_T0063573.1 MGP_129S1SvImJ_G0027847.1 mouse_genomes_project 3 125421701 125426010 - MGP_129S1SvImJ_P0063573 Synpo2 protein_coding protein_coding MGP_129S1SvImJ_T0063574.1 MGP_129S1SvImJ_G0027847.1 mouse_genomes_project 3 125423980 125427699 - MGP_129S1SvImJ_P0063574 Synpo2 protein_coding protein_coding MGP_129S1SvImJ_T0063575.1 MGP_129S1SvImJ_G0027847.1 mouse_genomes_project 3 125491922 125549502 - Synpo2 protein_coding processed_transcript MGP_129S1SvImJ_T0061109.1 MGP_129S1SvImJ_G0027278.1 mouse_genomes_project 3 66122546 66509550 + MGP_129S1SvImJ_P0061109 Rsrc1 protein_coding protein_coding MGP_129S1SvImJ_T0061110.1 MGP_129S1SvImJ_G0027278.1 mouse_genomes_project 3 66126826 66138437 + MGP_129S1SvImJ_P0061110 Rsrc1 protein_coding protein_coding MGP_129S1SvImJ_T0061111.1 MGP_129S1SvImJ_G0027278.1 mouse_genomes_project 3 66126828 66511386 + MGP_129S1SvImJ_P0061111 Rsrc1 protein_coding protein_coding MGP_129S1SvImJ_T0061112.1 MGP_129S1SvImJ_G0027278.1 mouse_genomes_project 3 66126841 66224133 + Rsrc1 protein_coding retained_intron MGP_129S1SvImJ_T0061113.1 MGP_129S1SvImJ_G0027278.1 mouse_genomes_project 3 66126841 66506716 + MGP_129S1SvImJ_P0061113 Rsrc1 protein_coding protein_coding MGP_129S1SvImJ_T0061114.1 MGP_129S1SvImJ_G0027278.1 mouse_genomes_project 3 66126859 66511381 + MGP_129S1SvImJ_P0061114 Rsrc1 protein_coding protein_coding MGP_129S1SvImJ_T0061115.1 MGP_129S1SvImJ_G0027278.1 mouse_genomes_project 3 66126860 66509549 + MGP_129S1SvImJ_P0061115 Rsrc1 protein_coding protein_coding MGP_129S1SvImJ_T0061116.1 MGP_129S1SvImJ_G0027278.1 mouse_genomes_project 3 66127123 66511387 + MGP_129S1SvImJ_P0061116 Rsrc1 protein_coding protein_coding MGP_129S1SvImJ_T0061117.1 MGP_129S1SvImJ_G0027278.1 mouse_genomes_project 3 66127134 66136675 + MGP_129S1SvImJ_P0061117 Rsrc1 protein_coding protein_coding MGP_129S1SvImJ_T0061118.1 MGP_129S1SvImJ_G0027278.1 mouse_genomes_project 3 66132935 66136856 + Rsrc1 protein_coding retained_intron MGP_129S1SvImJ_T0007708.1 MGP_129S1SvImJ_G0006305.1 mouse_genomes_project 3 133518003 133519797 + Gm43522 lincRNA lincRNA MGP_129S1SvImJ_T0007709.1 MGP_129S1SvImJ_G0006305.1 mouse_genomes_project 3 133518932 133520856 + Gm43522 lincRNA lincRNA MGP_129S1SvImJ_T0004399.1 MGP_129S1SvImJ_G0003844.1 mouse_genomes_project 3 138830500 138864862 + antisense antisense MGP_129S1SvImJ_T0004400.1 MGP_129S1SvImJ_G0003844.1 mouse_genomes_project 3 138864095 139110448 + antisense antisense MGP_129S1SvImJ_T0014157.1 MGP_129S1SvImJ_G0012246.1 mouse_genomes_project 3 82479042 82479622 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004218.1 MGP_129S1SvImJ_G0003721.1 mouse_genomes_project 3 23613262 23614491 + A830092H15Rik antisense antisense MGP_129S1SvImJ_T0004219.1 MGP_129S1SvImJ_G0003721.1 mouse_genomes_project 3 23614063 23615487 + A830092H15Rik antisense antisense MGP_129S1SvImJ_T0061830.1 MGP_129S1SvImJ_G0027427.1 mouse_genomes_project 3 89466729 89475995 + MGP_129S1SvImJ_P0061830 Dpm3 protein_coding protein_coding MGP_129S1SvImJ_T0061831.1 MGP_129S1SvImJ_G0027427.1 mouse_genomes_project 3 89475469 89475995 + MGP_129S1SvImJ_P0061831 Dpm3 protein_coding protein_coding MGP_129S1SvImJ_T0061832.1 MGP_129S1SvImJ_G0027427.1 mouse_genomes_project 3 89475556 89475997 + Dpm3 protein_coding retained_intron MGP_129S1SvImJ_T0061119.1 MGP_129S1SvImJ_G0027279.1 mouse_genomes_project 3 66527075 66556799 + MGP_129S1SvImJ_P0061119 Mlf1 protein_coding protein_coding MGP_129S1SvImJ_T0061120.1 MGP_129S1SvImJ_G0027279.1 mouse_genomes_project 3 66527103 66534356 + Mlf1 protein_coding processed_transcript MGP_129S1SvImJ_T0061121.1 MGP_129S1SvImJ_G0027279.1 mouse_genomes_project 3 66527120 66552100 + MGP_129S1SvImJ_P0061121 Mlf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061122.1 MGP_129S1SvImJ_G0027279.1 mouse_genomes_project 3 66527126 66556804 + MGP_129S1SvImJ_P0061122 Mlf1 protein_coding protein_coding MGP_129S1SvImJ_T0064311.1 MGP_129S1SvImJ_G0027987.1 mouse_genomes_project 3 156022317 156062761 - Dnajb4 protein_coding processed_transcript MGP_129S1SvImJ_T0064312.1 MGP_129S1SvImJ_G0027987.1 mouse_genomes_project 3 156027759 156038955 - MGP_129S1SvImJ_P0064312 Dnajb4 protein_coding protein_coding MGP_129S1SvImJ_T0064313.1 MGP_129S1SvImJ_G0027987.1 mouse_genomes_project 3 156027786 156062565 - MGP_129S1SvImJ_P0064313 Dnajb4 protein_coding protein_coding MGP_129S1SvImJ_T0064314.1 MGP_129S1SvImJ_G0027987.1 mouse_genomes_project 3 156028885 156062501 - MGP_129S1SvImJ_P0064314 Dnajb4 protein_coding protein_coding MGP_129S1SvImJ_T0064315.1 MGP_129S1SvImJ_G0027987.1 mouse_genomes_project 3 156038486 156062539 - Dnajb4 protein_coding processed_transcript MGP_129S1SvImJ_T0064316.1 MGP_129S1SvImJ_G0027987.1 mouse_genomes_project 3 156038672 156062539 - MGP_129S1SvImJ_P0064316 Dnajb4 protein_coding protein_coding MGP_129S1SvImJ_T0064317.1 MGP_129S1SvImJ_G0027987.1 mouse_genomes_project 3 156057874 156062784 - Dnajb4 protein_coding retained_intron MGP_129S1SvImJ_T0007646.1 MGP_129S1SvImJ_G0006257.1 mouse_genomes_project 3 101814831 101822226 + Gm43464 lincRNA lincRNA MGP_129S1SvImJ_T0060954.1 MGP_129S1SvImJ_G0027239.1 mouse_genomes_project 3 57530250 57547616 - MGP_129S1SvImJ_P0060954 Siah2 protein_coding protein_coding MGP_129S1SvImJ_T0060955.1 MGP_129S1SvImJ_G0027239.1 mouse_genomes_project 3 57531488 57541364 - Siah2 protein_coding processed_transcript MGP_129S1SvImJ_T0062120.1 MGP_129S1SvImJ_G0027493.1 mouse_genomes_project 3 92853646 92854927 + MGP_129S1SvImJ_P0062120 Sprr2i protein_coding protein_coding MGP_129S1SvImJ_T0001413.1 MGP_129S1SvImJ_G0001336.1 mouse_genomes_project 3 161117423 161120598 + TEC TEC MGP_129S1SvImJ_T0062060.1 MGP_129S1SvImJ_G0027467.1 mouse_genomes_project 3 90819519 90832171 - MGP_129S1SvImJ_P0062060 Chtop protein_coding protein_coding MGP_129S1SvImJ_T0062061.1 MGP_129S1SvImJ_G0027467.1 mouse_genomes_project 3 90819519 90832173 - MGP_129S1SvImJ_P0062061 Chtop protein_coding protein_coding MGP_129S1SvImJ_T0062062.1 MGP_129S1SvImJ_G0027467.1 mouse_genomes_project 3 90819519 90832172 - MGP_129S1SvImJ_P0062062 Chtop protein_coding protein_coding MGP_129S1SvImJ_T0062063.1 MGP_129S1SvImJ_G0027467.1 mouse_genomes_project 3 90819521 90832183 - MGP_129S1SvImJ_P0062063 Chtop protein_coding protein_coding MGP_129S1SvImJ_T0062064.1 MGP_129S1SvImJ_G0027467.1 mouse_genomes_project 3 90819528 90832219 - MGP_129S1SvImJ_P0062064 Chtop protein_coding protein_coding MGP_129S1SvImJ_T0062065.1 MGP_129S1SvImJ_G0027467.1 mouse_genomes_project 3 90820057 90832195 - MGP_129S1SvImJ_P0062065 Chtop protein_coding protein_coding MGP_129S1SvImJ_T0062066.1 MGP_129S1SvImJ_G0027467.1 mouse_genomes_project 3 90820258 90832206 - MGP_129S1SvImJ_P0062066 Chtop protein_coding protein_coding MGP_129S1SvImJ_T0062067.1 MGP_129S1SvImJ_G0027467.1 mouse_genomes_project 3 90820465 90830594 - MGP_129S1SvImJ_P0062067 Chtop protein_coding unknown_likely_coding MGP_129S1SvImJ_T0062068.1 MGP_129S1SvImJ_G0027467.1 mouse_genomes_project 3 90823507 90832197 - MGP_129S1SvImJ_P0062068 Chtop protein_coding protein_coding MGP_129S1SvImJ_T0062069.1 MGP_129S1SvImJ_G0027467.1 mouse_genomes_project 3 90824480 90831743 - MGP_129S1SvImJ_P0062069 Chtop protein_coding protein_coding MGP_129S1SvImJ_T0001255.1 MGP_129S1SvImJ_G0001179.1 mouse_genomes_project 3 65104102 65106082 + TEC TEC MGP_129S1SvImJ_T0099725.1 MGP_129S1SvImJ_G0037792.1 mouse_genomes_project 3 33471393 33471498 + Gm25696 snRNA snRNA MGP_129S1SvImJ_T0099788.1 MGP_129S1SvImJ_G0037855.1 mouse_genomes_project 3 132937145 132937252 + Gm22682 snRNA snRNA MGP_129S1SvImJ_T0064011.1 MGP_129S1SvImJ_G0027927.1 mouse_genomes_project 3 141265952 141281598 + MGP_129S1SvImJ_P0064011 Adh7 protein_coding protein_coding MGP_129S1SvImJ_T0064012.1 MGP_129S1SvImJ_G0027927.1 mouse_genomes_project 3 141269656 141271273 + Adh7 protein_coding retained_intron MGP_129S1SvImJ_T0064013.1 MGP_129S1SvImJ_G0027927.1 mouse_genomes_project 3 141276234 141279625 + Adh7 protein_coding processed_transcript MGP_129S1SvImJ_T0101075.1 MGP_129S1SvImJ_G0039142.1 mouse_genomes_project 3 151961149 151961281 - Gm23131 snoRNA snoRNA MGP_129S1SvImJ_T0101071.1 MGP_129S1SvImJ_G0039138.1 mouse_genomes_project 3 136405582 136405714 - Gm23011 snoRNA snoRNA MGP_129S1SvImJ_T0011554.1 MGP_129S1SvImJ_G0009670.1 mouse_genomes_project 3 28090833 28091245 - 1600017P15Rik misc_RNA misc_RNA MGP_129S1SvImJ_T0061978.1 MGP_129S1SvImJ_G0027453.1 mouse_genomes_project 3 90338684 90359036 + MGP_129S1SvImJ_P0061978 Tpm3 protein_coding protein_coding MGP_129S1SvImJ_T0061979.1 MGP_129S1SvImJ_G0027453.1 mouse_genomes_project 3 90346772 90356502 + Tpm3 protein_coding retained_intron MGP_129S1SvImJ_T0061980.1 MGP_129S1SvImJ_G0027453.1 mouse_genomes_project 3 90346772 90354786 + Tpm3 protein_coding retained_intron MGP_129S1SvImJ_T0061981.1 MGP_129S1SvImJ_G0027453.1 mouse_genomes_project 3 90346822 90366012 + MGP_129S1SvImJ_P0061981 Tpm3 protein_coding protein_coding MGP_129S1SvImJ_T0061982.1 MGP_129S1SvImJ_G0027453.1 mouse_genomes_project 3 90346839 90358001 + MGP_129S1SvImJ_P0061982 Tpm3 protein_coding protein_coding MGP_129S1SvImJ_T0061983.1 MGP_129S1SvImJ_G0027453.1 mouse_genomes_project 3 90353279 90354456 + Tpm3 protein_coding retained_intron MGP_129S1SvImJ_T0061984.1 MGP_129S1SvImJ_G0027453.1 mouse_genomes_project 3 90354217 90356713 + Tpm3 protein_coding retained_intron MGP_129S1SvImJ_T0061985.1 MGP_129S1SvImJ_G0027453.1 mouse_genomes_project 3 90354347 90354824 + Tpm3 protein_coding retained_intron MGP_129S1SvImJ_T0061986.1 MGP_129S1SvImJ_G0027453.1 mouse_genomes_project 3 90354364 90355478 + Tpm3 protein_coding retained_intron MGP_129S1SvImJ_T0061987.1 MGP_129S1SvImJ_G0027453.1 mouse_genomes_project 3 90354969 90356948 + Tpm3 protein_coding retained_intron MGP_129S1SvImJ_T0061988.1 MGP_129S1SvImJ_G0027453.1 mouse_genomes_project 3 90356536 90357378 + Tpm3 protein_coding retained_intron MGP_129S1SvImJ_T0061989.1 MGP_129S1SvImJ_G0027453.1 mouse_genomes_project 3 90356964 90366012 + Tpm3 protein_coding processed_transcript MGP_129S1SvImJ_T0061024.1 MGP_129S1SvImJ_G0027258.1 mouse_genomes_project 3 61305906 61440653 + MGP_129S1SvImJ_P0061024 Arhgef26 protein_coding protein_coding MGP_129S1SvImJ_T0061025.1 MGP_129S1SvImJ_G0027258.1 mouse_genomes_project 3 61306561 61350215 + Arhgef26 protein_coding processed_transcript MGP_129S1SvImJ_T0061026.1 MGP_129S1SvImJ_G0027258.1 mouse_genomes_project 3 61307952 61348612 + Arhgef26 protein_coding retained_intron MGP_129S1SvImJ_T0061027.1 MGP_129S1SvImJ_G0027258.1 mouse_genomes_project 3 61308663 61351487 + Arhgef26 protein_coding processed_transcript MGP_129S1SvImJ_T0061028.1 MGP_129S1SvImJ_G0027258.1 mouse_genomes_project 3 61395297 61438644 + MGP_129S1SvImJ_P0061028 Arhgef26 protein_coding protein_coding MGP_129S1SvImJ_T0061029.1 MGP_129S1SvImJ_G0027258.1 mouse_genomes_project 3 61403477 61406309 + Arhgef26 protein_coding retained_intron MGP_129S1SvImJ_T0004427.1 MGP_129S1SvImJ_G0003864.1 mouse_genomes_project 3 158726750 158729436 - Gm20389 antisense antisense MGP_129S1SvImJ_T0014010.1 MGP_129S1SvImJ_G0012099.1 mouse_genomes_project 3 34961603 34962708 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014026.1 MGP_129S1SvImJ_G0012115.1 mouse_genomes_project 3 40388513 40388661 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014276.1 MGP_129S1SvImJ_G0012365.1 mouse_genomes_project 3 115513581 115513839 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102469.1 MGP_129S1SvImJ_G0040303.1 mouse_genomes_project 3 88521947 88524320 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0007555.1 MGP_129S1SvImJ_G0006188.1 mouse_genomes_project 3 51489141 51502673 - Gm20750 lincRNA lincRNA MGP_129S1SvImJ_T0061948.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90261551 90315032 - MGP_129S1SvImJ_P0061948 Ubap2l protein_coding protein_coding MGP_129S1SvImJ_T0061949.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90261551 90315022 - MGP_129S1SvImJ_P0061949 Ubap2l protein_coding protein_coding MGP_129S1SvImJ_T0061950.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90261699 90315042 - MGP_129S1SvImJ_P0061950 Ubap2l protein_coding protein_coding MGP_129S1SvImJ_T0061951.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90261704 90315029 - MGP_129S1SvImJ_P0061951 Ubap2l protein_coding protein_coding MGP_129S1SvImJ_T0061952.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90262224 90264701 - MGP_129S1SvImJ_P0061952 Ubap2l protein_coding protein_coding MGP_129S1SvImJ_T0061953.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90263810 90265198 - Ubap2l protein_coding retained_intron MGP_129S1SvImJ_T0061954.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90267405 90315019 - MGP_129S1SvImJ_P0061954 Ubap2l protein_coding protein_coding MGP_129S1SvImJ_T0061955.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90267630 90283871 - MGP_129S1SvImJ_P0061955 Ubap2l protein_coding protein_coding MGP_129S1SvImJ_T0061956.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90267631 90315082 - MGP_129S1SvImJ_P0061956 Ubap2l protein_coding protein_coding MGP_129S1SvImJ_T0061957.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90267631 90315039 - MGP_129S1SvImJ_P0061957 Ubap2l protein_coding protein_coding MGP_129S1SvImJ_T0061958.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90276775 90278873 - Ubap2l protein_coding retained_intron MGP_129S1SvImJ_T0061959.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90276948 90283168 - Ubap2l protein_coding retained_intron MGP_129S1SvImJ_T0061960.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90277597 90314898 - Ubap2l protein_coding retained_intron MGP_129S1SvImJ_T0061961.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90278719 90280207 - Ubap2l protein_coding retained_intron MGP_129S1SvImJ_T0061962.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90279131 90281075 - Ubap2l protein_coding retained_intron MGP_129S1SvImJ_T0061963.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90282824 90290021 - Ubap2l protein_coding retained_intron MGP_129S1SvImJ_T0061964.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90284610 90286013 - Ubap2l protein_coding retained_intron MGP_129S1SvImJ_T0061965.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90299009 90301405 - Ubap2l protein_coding retained_intron MGP_129S1SvImJ_T0061966.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90301528 90314649 - MGP_129S1SvImJ_P0061966 Ubap2l protein_coding protein_coding MGP_129S1SvImJ_T0061967.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90304344 90315069 - Ubap2l protein_coding retained_intron MGP_129S1SvImJ_T0061968.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90306284 90315195 - MGP_129S1SvImJ_P0061968 Ubap2l protein_coding protein_coding MGP_129S1SvImJ_T0061969.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90306354 90315005 - MGP_129S1SvImJ_P0061969 Ubap2l protein_coding protein_coding MGP_129S1SvImJ_T0061970.1 MGP_129S1SvImJ_G0027451.1 mouse_genomes_project 3 90307418 90310842 - MGP_129S1SvImJ_P0061970 Ubap2l protein_coding protein_coding MGP_129S1SvImJ_T0064446.1 MGP_129S1SvImJ_G0028004.1 mouse_genomes_project 3 158613231 158643043 + MGP_129S1SvImJ_P0064446 Cryz protein_coding protein_coding MGP_129S1SvImJ_T0064447.1 MGP_129S1SvImJ_G0028004.1 mouse_genomes_project 3 158613231 158643041 + MGP_129S1SvImJ_P0064447 Cryz protein_coding protein_coding MGP_129S1SvImJ_T0064448.1 MGP_129S1SvImJ_G0028004.1 mouse_genomes_project 3 158613231 158643043 + MGP_129S1SvImJ_P0064448 Cryz protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064449.1 MGP_129S1SvImJ_G0028004.1 mouse_genomes_project 3 158613664 158642028 + MGP_129S1SvImJ_P0064449 Cryz protein_coding protein_coding MGP_129S1SvImJ_T0064450.1 MGP_129S1SvImJ_G0028004.1 mouse_genomes_project 3 158613717 158631375 + MGP_129S1SvImJ_P0064450 Cryz protein_coding protein_coding MGP_129S1SvImJ_T0064451.1 MGP_129S1SvImJ_G0028004.1 mouse_genomes_project 3 158613742 158638470 + MGP_129S1SvImJ_P0064451 Cryz protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064452.1 MGP_129S1SvImJ_G0028004.1 mouse_genomes_project 3 158613880 158631257 + MGP_129S1SvImJ_P0064452 Cryz protein_coding protein_coding MGP_129S1SvImJ_T0064453.1 MGP_129S1SvImJ_G0028004.1 mouse_genomes_project 3 158613930 158633669 + MGP_129S1SvImJ_P0064453 Cryz protein_coding protein_coding MGP_129S1SvImJ_T0064454.1 MGP_129S1SvImJ_G0028004.1 mouse_genomes_project 3 158613966 158638370 + MGP_129S1SvImJ_P0064454 Cryz protein_coding protein_coding MGP_129S1SvImJ_T0064455.1 MGP_129S1SvImJ_G0028004.1 mouse_genomes_project 3 158626227 158642031 + MGP_129S1SvImJ_P0064455 Cryz protein_coding protein_coding MGP_129S1SvImJ_T0064456.1 MGP_129S1SvImJ_G0028004.1 mouse_genomes_project 3 158635702 158639231 + Cryz protein_coding retained_intron MGP_129S1SvImJ_T0007717.1 MGP_129S1SvImJ_G0006313.1 mouse_genomes_project 3 136096219 136098691 - Gm43254 lincRNA lincRNA MGP_129S1SvImJ_T0013907.1 MGP_129S1SvImJ_G0011996.1 mouse_genomes_project 3 1132 1883 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061941.1 MGP_129S1SvImJ_G0027450.1 mouse_genomes_project 3 90254268 90260103 - MGP_129S1SvImJ_P0061941 Hax1 protein_coding protein_coding MGP_129S1SvImJ_T0061942.1 MGP_129S1SvImJ_G0027450.1 mouse_genomes_project 3 90255212 90259992 - MGP_129S1SvImJ_P0061942 Hax1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0061943.1 MGP_129S1SvImJ_G0027450.1 mouse_genomes_project 3 90256556 90260098 - Hax1 protein_coding retained_intron MGP_129S1SvImJ_T0061944.1 MGP_129S1SvImJ_G0027450.1 mouse_genomes_project 3 90256682 90257310 - Hax1 protein_coding retained_intron MGP_129S1SvImJ_T0061945.1 MGP_129S1SvImJ_G0027450.1 mouse_genomes_project 3 90256867 90260092 - MGP_129S1SvImJ_P0061945 Hax1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061946.1 MGP_129S1SvImJ_G0027450.1 mouse_genomes_project 3 90258931 90260192 - Hax1 protein_coding retained_intron MGP_129S1SvImJ_T0061947.1 MGP_129S1SvImJ_G0027450.1 mouse_genomes_project 3 90259181 90259774 - MGP_129S1SvImJ_P0061947 Hax1 protein_coding protein_coding MGP_129S1SvImJ_T0007499.1 MGP_129S1SvImJ_G0006148.1 mouse_genomes_project 3 31955535 32015923 - Gm38505 lincRNA lincRNA MGP_129S1SvImJ_T0004430.1 MGP_129S1SvImJ_G0003867.1 mouse_genomes_project 3 162075668 162077580 + 1810013D15Rik antisense antisense MGP_129S1SvImJ_T0004431.1 MGP_129S1SvImJ_G0003867.1 mouse_genomes_project 3 162075670 162077312 + 1810013D15Rik antisense antisense MGP_129S1SvImJ_T0004432.1 MGP_129S1SvImJ_G0003867.1 mouse_genomes_project 3 162076180 162088790 + 1810013D15Rik antisense antisense MGP_129S1SvImJ_T0062503.1 MGP_129S1SvImJ_G0027598.1 mouse_genomes_project 3 96667008 96675054 - MGP_129S1SvImJ_P0062503 BC028528 protein_coding protein_coding MGP_129S1SvImJ_T0062504.1 MGP_129S1SvImJ_G0027598.1 mouse_genomes_project 3 96667012 96675004 - MGP_129S1SvImJ_P0062504 BC028528 protein_coding protein_coding MGP_129S1SvImJ_T0062505.1 MGP_129S1SvImJ_G0027598.1 mouse_genomes_project 3 96668025 96674979 - MGP_129S1SvImJ_P0062505 BC028528 protein_coding protein_coding MGP_129S1SvImJ_T0062506.1 MGP_129S1SvImJ_G0027598.1 mouse_genomes_project 3 96671007 96675000 - BC028528 protein_coding processed_transcript MGP_129S1SvImJ_T0062507.1 MGP_129S1SvImJ_G0027598.1 mouse_genomes_project 3 96671494 96675030 - BC028528 protein_coding retained_intron MGP_129S1SvImJ_T0013942.1 MGP_129S1SvImJ_G0012031.1 mouse_genomes_project 3 10022510 10022853 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098887.1 MGP_129S1SvImJ_G0036965.1 mouse_genomes_project 3 102763067 102763819 - Gm42937 sense_intronic sense_intronic MGP_129S1SvImJ_T0010580.1 MGP_129S1SvImJ_G0008696.1 mouse_genomes_project 3 161682499 161682570 + Mir186 miRNA miRNA MGP_129S1SvImJ_T0004304.1 MGP_129S1SvImJ_G0003784.1 mouse_genomes_project 3 94966428 94976323 - Gm43401 antisense antisense MGP_129S1SvImJ_T0014377.1 MGP_129S1SvImJ_G0012466.1 mouse_genomes_project 3 150228648 150230135 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014320.1 MGP_129S1SvImJ_G0012409.1 mouse_genomes_project 3 132795182 132795533 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102468.1 MGP_129S1SvImJ_G0040302.1 mouse_genomes_project 3 87656076 87656601 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0014270.1 MGP_129S1SvImJ_G0012359.1 mouse_genomes_project 3 114069353 114070218 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063994.1 MGP_129S1SvImJ_G0027922.1 mouse_genomes_project 3 141091408 141111225 - MGP_129S1SvImJ_P0063994 Gm5105 protein_coding protein_coding MGP_129S1SvImJ_T0014112.1 MGP_129S1SvImJ_G0012201.1 mouse_genomes_project 3 66781499 66782447 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060133.1 MGP_129S1SvImJ_G0027089.1 mouse_genomes_project 3 15745548 15747151 + MGP_129S1SvImJ_P0060133 protein_coding protein_coding MGP_129S1SvImJ_T0013922.1 MGP_129S1SvImJ_G0012011.1 mouse_genomes_project 3 5037237 5039089 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001144.1 MGP_129S1SvImJ_G0001070.1 mouse_genomes_project 3 25704861 25706599 + TEC TEC MGP_129S1SvImJ_T0001289.1 MGP_129S1SvImJ_G0001213.1 mouse_genomes_project 3 97617465 97618249 - TEC TEC MGP_129S1SvImJ_T0098878.1 MGP_129S1SvImJ_G0036956.1 mouse_genomes_project 3 100275715 100279171 + Gm42717 sense_intronic sense_intronic MGP_129S1SvImJ_T0061386.1 MGP_129S1SvImJ_G0027343.1 mouse_genomes_project 3 84408423 84504622 - MGP_129S1SvImJ_P0061386 protein_coding protein_coding MGP_129S1SvImJ_T0061388.1 MGP_129S1SvImJ_G0027343.1 mouse_genomes_project 3 84409534 84504573 - MGP_129S1SvImJ_P0061388 protein_coding protein_coding MGP_129S1SvImJ_T0061389.1 MGP_129S1SvImJ_G0027343.1 mouse_genomes_project 3 84410066 84504713 - MGP_129S1SvImJ_P0061389 protein_coding protein_coding MGP_129S1SvImJ_T0063004.1 MGP_129S1SvImJ_G0027720.1 mouse_genomes_project 3 107102581 107184108 - MGP_129S1SvImJ_P0063004 Rap1a protein_coding protein_coding MGP_129S1SvImJ_T0063005.1 MGP_129S1SvImJ_G0027720.1 mouse_genomes_project 3 107114502 107184082 - MGP_129S1SvImJ_P0063005 Rap1a protein_coding protein_coding MGP_129S1SvImJ_T0004317.1 MGP_129S1SvImJ_G0003791.1 mouse_genomes_project 3 96979200 96984151 - Gm17690 antisense antisense MGP_129S1SvImJ_T0004318.1 MGP_129S1SvImJ_G0003791.1 mouse_genomes_project 3 96983111 96984153 - Gm17690 antisense antisense MGP_129S1SvImJ_T0001183.1 MGP_129S1SvImJ_G0001109.1 mouse_genomes_project 3 39001279 39004925 + TEC TEC MGP_129S1SvImJ_T0001402.1 MGP_129S1SvImJ_G0001325.1 mouse_genomes_project 3 156254520 156257599 - TEC TEC MGP_129S1SvImJ_T0060748.1 MGP_129S1SvImJ_G0027196.1 mouse_genomes_project 3 49874505 49878758 - MGP_129S1SvImJ_P0060748 Ndufc1 protein_coding protein_coding MGP_129S1SvImJ_T0060749.1 MGP_129S1SvImJ_G0027196.1 mouse_genomes_project 3 49875285 49877251 - Ndufc1 protein_coding retained_intron MGP_129S1SvImJ_T0060750.1 MGP_129S1SvImJ_G0027196.1 mouse_genomes_project 3 49875308 49878436 - Ndufc1 protein_coding processed_transcript MGP_129S1SvImJ_T0060751.1 MGP_129S1SvImJ_G0027196.1 mouse_genomes_project 3 49875412 49878734 - MGP_129S1SvImJ_P0060751 Ndufc1 protein_coding protein_coding MGP_129S1SvImJ_T0014153.1 MGP_129S1SvImJ_G0012242.1 mouse_genomes_project 3 80139664 80140117 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061493.1 MGP_129S1SvImJ_G0027369.1 mouse_genomes_project 3 87920811 87942074 + MGP_129S1SvImJ_P0061493 Insrr protein_coding protein_coding MGP_129S1SvImJ_T0061494.1 MGP_129S1SvImJ_G0027369.1 mouse_genomes_project 3 87920825 87931099 + Insrr protein_coding retained_intron MGP_129S1SvImJ_T0061495.1 MGP_129S1SvImJ_G0027369.1 mouse_genomes_project 3 87920954 87942025 + MGP_129S1SvImJ_P0061495 Insrr protein_coding protein_coding MGP_129S1SvImJ_T0061496.1 MGP_129S1SvImJ_G0027369.1 mouse_genomes_project 3 87927936 87928802 + Insrr protein_coding processed_transcript MGP_129S1SvImJ_T0062396.1 MGP_129S1SvImJ_G0027581.1 mouse_genomes_project 3 96014354 96029685 - MGP_129S1SvImJ_P0062396 Anxa9 protein_coding protein_coding MGP_129S1SvImJ_T0062397.1 MGP_129S1SvImJ_G0027581.1 mouse_genomes_project 3 96014354 96030057 - MGP_129S1SvImJ_P0062397 Anxa9 protein_coding protein_coding MGP_129S1SvImJ_T0062398.1 MGP_129S1SvImJ_G0027581.1 mouse_genomes_project 3 96014556 96029685 - MGP_129S1SvImJ_P0062398 Anxa9 protein_coding protein_coding MGP_129S1SvImJ_T0062399.1 MGP_129S1SvImJ_G0027581.1 mouse_genomes_project 3 96028813 96029685 - MGP_129S1SvImJ_P0062399 Anxa9 protein_coding protein_coding MGP_129S1SvImJ_T0062641.1 MGP_129S1SvImJ_G0027637.1 mouse_genomes_project 3 97818340 97832197 - MGP_129S1SvImJ_P0062641 Gja8 protein_coding protein_coding MGP_129S1SvImJ_T0064195.1 MGP_129S1SvImJ_G0027965.1 mouse_genomes_project 3 149444411 149493442 + MGP_129S1SvImJ_P0064195 Syde2 protein_coding protein_coding MGP_129S1SvImJ_T0064196.1 MGP_129S1SvImJ_G0027965.1 mouse_genomes_project 3 149445194 149493442 + MGP_129S1SvImJ_P0064196 Syde2 protein_coding protein_coding MGP_129S1SvImJ_T0064197.1 MGP_129S1SvImJ_G0027965.1 mouse_genomes_project 3 149445344 149493449 + MGP_129S1SvImJ_P0064197 Syde2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0064198.1 MGP_129S1SvImJ_G0027965.1 mouse_genomes_project 3 149450893 149458335 + Syde2 protein_coding processed_transcript MGP_129S1SvImJ_T0014314.1 MGP_129S1SvImJ_G0012403.1 mouse_genomes_project 3 130001208 130001554 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001412.1 MGP_129S1SvImJ_G0001335.1 mouse_genomes_project 3 160845458 160847132 + TEC TEC MGP_129S1SvImJ_T0018019.1 MGP_129S1SvImJ_G0015518.1 mouse_genomes_project 3 109926045 109932516 - Gm12522 processed_transcript processed_transcript MGP_129S1SvImJ_T0014016.1 MGP_129S1SvImJ_G0012105.1 mouse_genomes_project 3 35828412 35828888 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011564.1 MGP_129S1SvImJ_G0009680.1 mouse_genomes_project 3 83483833 83484131 - Gm22342 misc_RNA misc_RNA MGP_129S1SvImJ_T0099728.1 MGP_129S1SvImJ_G0037795.1 mouse_genomes_project 3 43119901 43120006 + Gm24997 snRNA snRNA MGP_129S1SvImJ_T0004321.1 MGP_129S1SvImJ_G0003794.1 mouse_genomes_project 3 97079850 97083065 - Gm20628 antisense antisense MGP_129S1SvImJ_T0013961.1 MGP_129S1SvImJ_G0012050.1 mouse_genomes_project 3 15718023 15718435 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014284.1 MGP_129S1SvImJ_G0012373.1 mouse_genomes_project 3 118773665 118774050 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062126.1 MGP_129S1SvImJ_G0027499.1 mouse_genomes_project 3 92934488 92936432 - MGP_129S1SvImJ_P0062126 Sprr1a protein_coding protein_coding MGP_129S1SvImJ_T0001382.1 MGP_129S1SvImJ_G0001305.1 mouse_genomes_project 3 138785256 138787506 + TEC TEC MGP_129S1SvImJ_T0004244.1 MGP_129S1SvImJ_G0003737.1 mouse_genomes_project 3 35076401 35077541 + Gm12534 antisense antisense MGP_129S1SvImJ_T0064474.1 MGP_129S1SvImJ_G0028009.1 mouse_genomes_project 3 159316410 159317547 - MGP_129S1SvImJ_P0064474 protein_coding protein_coding MGP_129S1SvImJ_T0060723.1 MGP_129S1SvImJ_G0027192.1 mouse_genomes_project 3 48342628 48920586 - MGP_129S1SvImJ_P0060723 Slc7a11 protein_coding protein_coding MGP_129S1SvImJ_T0060724.1 MGP_129S1SvImJ_G0027192.1 mouse_genomes_project 3 48836423 48920583 - MGP_129S1SvImJ_P0060724 Slc7a11 protein_coding protein_coding MGP_129S1SvImJ_T0060725.1 MGP_129S1SvImJ_G0027192.1 mouse_genomes_project 3 48841334 48842285 - Slc7a11 protein_coding processed_transcript MGP_129S1SvImJ_T0060726.1 MGP_129S1SvImJ_G0027192.1 mouse_genomes_project 3 48891627 48920586 - Slc7a11 protein_coding retained_intron MGP_129S1SvImJ_T0060727.1 MGP_129S1SvImJ_G0027192.1 mouse_genomes_project 3 48917893 48920577 - Slc7a11 protein_coding retained_intron MGP_129S1SvImJ_T0062136.1 MGP_129S1SvImJ_G0027507.1 mouse_genomes_project 3 93113783 93115060 - MGP_129S1SvImJ_P0062136 Lce1b protein_coding protein_coding MGP_129S1SvImJ_T0013923.1 MGP_129S1SvImJ_G0012012.1 mouse_genomes_project 3 5283826 5284634 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004376.1 MGP_129S1SvImJ_G0003826.1 mouse_genomes_project 3 124700377 124733742 - Gm42836 antisense antisense MGP_129S1SvImJ_T0017982.1 MGP_129S1SvImJ_G0015501.1 mouse_genomes_project 3 38869906 38873532 - processed_transcript retained_intron MGP_129S1SvImJ_T0014141.1 MGP_129S1SvImJ_G0012230.1 mouse_genomes_project 3 76485027 76485857 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007539.1 MGP_129S1SvImJ_G0006176.1 mouse_genomes_project 3 39529909 39537010 - Gm43733 lincRNA lincRNA MGP_129S1SvImJ_T0007540.1 MGP_129S1SvImJ_G0006176.1 mouse_genomes_project 3 39530866 39537040 - Gm43733 lincRNA lincRNA MGP_129S1SvImJ_T0007541.1 MGP_129S1SvImJ_G0006176.1 mouse_genomes_project 3 39530949 39531880 - Gm43733 lincRNA lincRNA MGP_129S1SvImJ_T0061144.1 MGP_129S1SvImJ_G0027287.1 mouse_genomes_project 3 67913813 67921717 + MGP_129S1SvImJ_P0061144 Il12a protein_coding protein_coding MGP_129S1SvImJ_T0061145.1 MGP_129S1SvImJ_G0027287.1 mouse_genomes_project 3 67914593 67921713 + MGP_129S1SvImJ_P0061145 Il12a protein_coding protein_coding MGP_129S1SvImJ_T0061146.1 MGP_129S1SvImJ_G0027287.1 mouse_genomes_project 3 67914696 67921261 + Il12a protein_coding retained_intron MGP_129S1SvImJ_T0061147.1 MGP_129S1SvImJ_G0027287.1 mouse_genomes_project 3 67917162 67921193 + Il12a protein_coding retained_intron MGP_129S1SvImJ_T0061148.1 MGP_129S1SvImJ_G0027287.1 mouse_genomes_project 3 67917190 67921715 + Il12a protein_coding retained_intron MGP_129S1SvImJ_T0061149.1 MGP_129S1SvImJ_G0027287.1 mouse_genomes_project 3 67917190 67921717 + Il12a protein_coding retained_intron MGP_129S1SvImJ_T0102495.1 MGP_129S1SvImJ_G0040329.1 mouse_genomes_project 3 99621378 99627900 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0062677.1 MGP_129S1SvImJ_G0027644.1 mouse_genomes_project 3 98627074 98628738 - MGP_129S1SvImJ_P0062677 Gm17651 protein_coding protein_coding MGP_129S1SvImJ_T0001305.1 MGP_129S1SvImJ_G0001229.1 mouse_genomes_project 3 110091010 110093183 - TEC TEC MGP_129S1SvImJ_T0061842.1 MGP_129S1SvImJ_G0027429.1 mouse_genomes_project 3 89480657 89488469 - MGP_129S1SvImJ_P0061842 Efna1 protein_coding protein_coding MGP_129S1SvImJ_T0061843.1 MGP_129S1SvImJ_G0027429.1 mouse_genomes_project 3 89480666 89488568 - MGP_129S1SvImJ_P0061843 Efna1 protein_coding protein_coding MGP_129S1SvImJ_T0014159.1 MGP_129S1SvImJ_G0012248.1 mouse_genomes_project 3 84471606 84472198 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063148.1 MGP_129S1SvImJ_G0027759.1 mouse_genomes_project 3 109462285 109467079 - MGP_129S1SvImJ_P0063148 Gstm6 protein_coding protein_coding MGP_129S1SvImJ_T0063149.1 MGP_129S1SvImJ_G0027759.1 mouse_genomes_project 3 109462293 109467180 - MGP_129S1SvImJ_P0063149 Gstm6 protein_coding protein_coding MGP_129S1SvImJ_T0063150.1 MGP_129S1SvImJ_G0027759.1 mouse_genomes_project 3 109462551 109466829 - MGP_129S1SvImJ_P0063150 Gstm6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063151.1 MGP_129S1SvImJ_G0027759.1 mouse_genomes_project 3 109465263 109467161 - Gstm6 protein_coding processed_transcript MGP_129S1SvImJ_T0013965.1 MGP_129S1SvImJ_G0012054.1 mouse_genomes_project 3 16779892 16780108 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001301.1 MGP_129S1SvImJ_G0001225.1 mouse_genomes_project 3 108184363 108189041 + TEC TEC MGP_129S1SvImJ_T0098583.1 MGP_129S1SvImJ_G0036668.1 mouse_genomes_project 3 97370326 97370443 + Gm28001 rRNA rRNA MGP_129S1SvImJ_T0013971.1 MGP_129S1SvImJ_G0012060.1 mouse_genomes_project 3 18030387 18031981 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101906.1 MGP_129S1SvImJ_G0039818.1 mouse_genomes_project 3 58628659 58690440 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101907.1 MGP_129S1SvImJ_G0039818.1 mouse_genomes_project 3 58675494 58698446 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0014336.1 MGP_129S1SvImJ_G0012425.1 mouse_genomes_project 3 137823359 137824661 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014114.1 MGP_129S1SvImJ_G0012203.1 mouse_genomes_project 3 67536724 67537309 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007559.1 MGP_129S1SvImJ_G0006192.1 mouse_genomes_project 3 53321852 53325041 + Gm26678 lincRNA lincRNA MGP_129S1SvImJ_T0001267.1 MGP_129S1SvImJ_G0001191.1 mouse_genomes_project 3 77224061 77230442 - TEC TEC MGP_129S1SvImJ_T0007493.1 MGP_129S1SvImJ_G0006143.1 mouse_genomes_project 3 27226274 27347966 - Gm33206 lincRNA lincRNA MGP_129S1SvImJ_T0011574.1 MGP_129S1SvImJ_G0009690.1 mouse_genomes_project 3 159124148 159124259 + Gm26456 misc_RNA misc_RNA MGP_129S1SvImJ_T0060157.1 MGP_129S1SvImJ_G0027094.1 mouse_genomes_project 3 16814951 16833492 - MGP_129S1SvImJ_P0060157 1700064H15Rik protein_coding protein_coding MGP_129S1SvImJ_T0004379.1 MGP_129S1SvImJ_G0003829.1 mouse_genomes_project 3 125754546 125757666 - Gm43591 antisense antisense MGP_129S1SvImJ_T0001185.1 MGP_129S1SvImJ_G0001111.1 mouse_genomes_project 3 39669541 39670463 - TEC TEC MGP_129S1SvImJ_T0102471.1 MGP_129S1SvImJ_G0040305.1 mouse_genomes_project 3 88637071 88637642 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0004426.1 MGP_129S1SvImJ_G0003863.1 mouse_genomes_project 3 157880342 157884096 + Gm43400 antisense antisense MGP_129S1SvImJ_T0060324.1 MGP_129S1SvImJ_G0027123.1 mouse_genomes_project 3 28122873 28145641 - MGP_129S1SvImJ_P0060324 Lrrc34 protein_coding protein_coding MGP_129S1SvImJ_T0011563.1 MGP_129S1SvImJ_G0009679.1 mouse_genomes_project 3 82610671 82610913 - Gm22038 misc_RNA misc_RNA MGP_129S1SvImJ_T0010520.1 MGP_129S1SvImJ_G0008636.1 mouse_genomes_project 3 30894571 30894676 - Gm27974 miRNA miRNA MGP_129S1SvImJ_T0004377.1 MGP_129S1SvImJ_G0003827.1 mouse_genomes_project 3 124841611 124851098 + Gm43569 antisense antisense MGP_129S1SvImJ_T0004391.1 MGP_129S1SvImJ_G0003839.1 mouse_genomes_project 3 133891587 133895597 - Gm43352 antisense antisense MGP_129S1SvImJ_T0060613.1 MGP_129S1SvImJ_G0027174.1 mouse_genomes_project 3 35586419 35592529 - protein_coding processed_transcript MGP_129S1SvImJ_T0001204.1 MGP_129S1SvImJ_G0001130.1 mouse_genomes_project 3 49700433 49702767 + TEC TEC MGP_129S1SvImJ_T0063617.1 MGP_129S1SvImJ_G0027857.1 mouse_genomes_project 3 128772798 128851945 + MGP_129S1SvImJ_P0063617 Arsj protein_coding protein_coding MGP_129S1SvImJ_T0061724.1 MGP_129S1SvImJ_G0027412.1 mouse_genomes_project 3 89124039 89262847 + MGP_129S1SvImJ_P0061724 Ash1l protein_coding protein_coding MGP_129S1SvImJ_T0061726.1 MGP_129S1SvImJ_G0027412.1 mouse_genomes_project 3 89124152 89237071 + MGP_129S1SvImJ_P0061726 Ash1l protein_coding unknown_likely_coding MGP_129S1SvImJ_T0061727.1 MGP_129S1SvImJ_G0027412.1 mouse_genomes_project 3 89124152 89262850 + MGP_129S1SvImJ_P0061727 Ash1l protein_coding unknown_likely_coding MGP_129S1SvImJ_T0061728.1 MGP_129S1SvImJ_G0027412.1 mouse_genomes_project 3 89140856 89262845 + MGP_129S1SvImJ_P0061728 Ash1l protein_coding protein_coding MGP_129S1SvImJ_T0061729.1 MGP_129S1SvImJ_G0027412.1 mouse_genomes_project 3 89201736 89206822 + Ash1l protein_coding retained_intron MGP_129S1SvImJ_T0061730.1 MGP_129S1SvImJ_G0027412.1 mouse_genomes_project 3 89234947 89239121 + Ash1l protein_coding retained_intron MGP_129S1SvImJ_T0063178.1 MGP_129S1SvImJ_G0027766.1 mouse_genomes_project 3 109640282 109680408 - MGP_129S1SvImJ_P0063178 Gnai3 protein_coding protein_coding MGP_129S1SvImJ_T0061766.1 MGP_129S1SvImJ_G0027419.1 mouse_genomes_project 3 89375010 89380303 + MGP_129S1SvImJ_P0061766 Scamp3 protein_coding protein_coding MGP_129S1SvImJ_T0061767.1 MGP_129S1SvImJ_G0027419.1 mouse_genomes_project 3 89375027 89380303 + MGP_129S1SvImJ_P0061767 Scamp3 protein_coding protein_coding MGP_129S1SvImJ_T0061768.1 MGP_129S1SvImJ_G0027419.1 mouse_genomes_project 3 89375033 89377203 + Scamp3 protein_coding retained_intron MGP_129S1SvImJ_T0061769.1 MGP_129S1SvImJ_G0027419.1 mouse_genomes_project 3 89375057 89380301 + MGP_129S1SvImJ_P0061769 Scamp3 protein_coding protein_coding MGP_129S1SvImJ_T0061770.1 MGP_129S1SvImJ_G0027419.1 mouse_genomes_project 3 89375068 89376990 + Scamp3 protein_coding retained_intron MGP_129S1SvImJ_T0061771.1 MGP_129S1SvImJ_G0027419.1 mouse_genomes_project 3 89375074 89377202 + Scamp3 protein_coding retained_intron MGP_129S1SvImJ_T0061772.1 MGP_129S1SvImJ_G0027419.1 mouse_genomes_project 3 89375158 89378814 + Scamp3 protein_coding retained_intron MGP_129S1SvImJ_T0061773.1 MGP_129S1SvImJ_G0027419.1 mouse_genomes_project 3 89375295 89377923 + Scamp3 protein_coding retained_intron MGP_129S1SvImJ_T0062722.1 MGP_129S1SvImJ_G0027662.1 mouse_genomes_project 3 100204554 100286952 + MGP_129S1SvImJ_P0062722 Wars2 protein_coding protein_coding MGP_129S1SvImJ_T0062723.1 MGP_129S1SvImJ_G0027662.1 mouse_genomes_project 3 100204596 100289470 + MGP_129S1SvImJ_P0062723 Wars2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062724.1 MGP_129S1SvImJ_G0027662.1 mouse_genomes_project 3 100204617 100309448 + MGP_129S1SvImJ_P0062724 Wars2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062725.1 MGP_129S1SvImJ_G0027662.1 mouse_genomes_project 3 100204620 100286646 + MGP_129S1SvImJ_P0062725 Wars2 protein_coding protein_coding MGP_129S1SvImJ_T0062726.1 MGP_129S1SvImJ_G0027662.1 mouse_genomes_project 3 100204689 100274864 + Wars2 protein_coding retained_intron MGP_129S1SvImJ_T0099750.1 MGP_129S1SvImJ_G0037817.1 mouse_genomes_project 3 79539881 79539984 + Gm26420 snRNA snRNA MGP_129S1SvImJ_T0060805.1 MGP_129S1SvImJ_G0027209.1 mouse_genomes_project 3 52486867 52493861 - MGP_129S1SvImJ_P0060805 Ufm1 protein_coding protein_coding MGP_129S1SvImJ_T0060806.1 MGP_129S1SvImJ_G0027209.1 mouse_genomes_project 3 52487408 52493276 - Ufm1 protein_coding retained_intron MGP_129S1SvImJ_T0060807.1 MGP_129S1SvImJ_G0027209.1 mouse_genomes_project 3 52487529 52493349 - MGP_129S1SvImJ_P0060807 Ufm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060808.1 MGP_129S1SvImJ_G0027209.1 mouse_genomes_project 3 52488397 52493353 - MGP_129S1SvImJ_P0060808 Ufm1 protein_coding protein_coding MGP_129S1SvImJ_T0060809.1 MGP_129S1SvImJ_G0027209.1 mouse_genomes_project 3 52489202 52493349 - Ufm1 protein_coding retained_intron MGP_129S1SvImJ_T0001306.1 MGP_129S1SvImJ_G0001230.1 mouse_genomes_project 3 110116258 110117688 + TEC TEC MGP_129S1SvImJ_T0060919.1 MGP_129S1SvImJ_G0027231.1 mouse_genomes_project 3 56457637 56488441 - MGP_129S1SvImJ_P0060919 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060920.1 MGP_129S1SvImJ_G0027231.1 mouse_genomes_project 3 56457681 56487988 - MGP_129S1SvImJ_P0060920 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0060921.1 MGP_129S1SvImJ_G0027231.1 mouse_genomes_project 3 56465627 56488177 - MGP_129S1SvImJ_P0060921 protein_coding protein_coding MGP_129S1SvImJ_T0060922.1 MGP_129S1SvImJ_G0027231.1 mouse_genomes_project 3 56467517 56488179 - MGP_129S1SvImJ_P0060922 protein_coding protein_coding MGP_129S1SvImJ_T0014111.1 MGP_129S1SvImJ_G0012200.1 mouse_genomes_project 3 66767029 66767605 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001279.1 MGP_129S1SvImJ_G0001203.1 mouse_genomes_project 3 90611129 90618055 + TEC TEC MGP_129S1SvImJ_T0063504.1 MGP_129S1SvImJ_G0027835.1 mouse_genomes_project 3 124175429 124198356 + MGP_129S1SvImJ_P0063504 Arhgap29 protein_coding protein_coding MGP_129S1SvImJ_T0063505.1 MGP_129S1SvImJ_G0027835.1 mouse_genomes_project 3 124176117 124243589 + MGP_129S1SvImJ_P0063505 Arhgap29 protein_coding protein_coding MGP_129S1SvImJ_T0063506.1 MGP_129S1SvImJ_G0027835.1 mouse_genomes_project 3 124176118 124215327 + MGP_129S1SvImJ_P0063506 Arhgap29 protein_coding protein_coding MGP_129S1SvImJ_T0063507.1 MGP_129S1SvImJ_G0027835.1 mouse_genomes_project 3 124192267 124219192 + MGP_129S1SvImJ_P0063507 Arhgap29 protein_coding protein_coding MGP_129S1SvImJ_T0063508.1 MGP_129S1SvImJ_G0027835.1 mouse_genomes_project 3 124192267 124236750 + MGP_129S1SvImJ_P0063508 Arhgap29 protein_coding protein_coding MGP_129S1SvImJ_T0063509.1 MGP_129S1SvImJ_G0027835.1 mouse_genomes_project 3 124192284 124241811 + MGP_129S1SvImJ_P0063509 Arhgap29 protein_coding protein_coding MGP_129S1SvImJ_T0063510.1 MGP_129S1SvImJ_G0027835.1 mouse_genomes_project 3 124207959 124219287 + Arhgap29 protein_coding retained_intron MGP_129S1SvImJ_T0063511.1 MGP_129S1SvImJ_G0027835.1 mouse_genomes_project 3 124215279 124218961 + Arhgap29 protein_coding retained_intron MGP_129S1SvImJ_T0063512.1 MGP_129S1SvImJ_G0027835.1 mouse_genomes_project 3 124229386 124232640 + Arhgap29 protein_coding retained_intron MGP_129S1SvImJ_T0004251.1 MGP_129S1SvImJ_G0003744.1 mouse_genomes_project 3 50306837 50313231 + Gm37229 antisense antisense MGP_129S1SvImJ_T0004393.1 MGP_129S1SvImJ_G0003841.1 mouse_genomes_project 3 136357773 136402406 + Gm42567 antisense antisense MGP_129S1SvImJ_T0014300.1 MGP_129S1SvImJ_G0012389.1 mouse_genomes_project 3 124428628 124430135 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014023.1 MGP_129S1SvImJ_G0012112.1 mouse_genomes_project 3 38832746 38833194 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014174.1 MGP_129S1SvImJ_G0012263.1 mouse_genomes_project 3 88745889 88746578 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013921.1 MGP_129S1SvImJ_G0012010.1 mouse_genomes_project 3 4708168 4708753 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062993.1 MGP_129S1SvImJ_G0027716.1 mouse_genomes_project 3 106403986 106417697 + MGP_129S1SvImJ_P0062993 4930564D02Rik protein_coding protein_coding MGP_129S1SvImJ_T0007766.1 MGP_129S1SvImJ_G0006356.1 mouse_genomes_project 3 150647392 150675678 + Gm29771 lincRNA lincRNA MGP_129S1SvImJ_T0060131.1 MGP_129S1SvImJ_G0027087.1 mouse_genomes_project 3 15225696 15229040 + MGP_129S1SvImJ_P0060131 Bhlhe22 protein_coding protein_coding MGP_129S1SvImJ_T0001323.1 MGP_129S1SvImJ_G0001247.1 mouse_genomes_project 3 123926609 123928417 - TEC TEC MGP_129S1SvImJ_T0060582.1 MGP_129S1SvImJ_G0027169.1 mouse_genomes_project 3 35163081 35173633 + MGP_129S1SvImJ_P0060582 Bbs12 protein_coding protein_coding MGP_129S1SvImJ_T0060583.1 MGP_129S1SvImJ_G0027169.1 mouse_genomes_project 3 35163083 35173636 + MGP_129S1SvImJ_P0060583 Bbs12 protein_coding protein_coding MGP_129S1SvImJ_T0062365.1 MGP_129S1SvImJ_G0027575.1 mouse_genomes_project 3 95925481 95935057 - MGP_129S1SvImJ_P0062365 Mllt11 protein_coding protein_coding MGP_129S1SvImJ_T0062366.1 MGP_129S1SvImJ_G0027575.1 mouse_genomes_project 3 95926375 95939706 - MGP_129S1SvImJ_P0062366 Mllt11 protein_coding protein_coding MGP_129S1SvImJ_T0062367.1 MGP_129S1SvImJ_G0027575.1 mouse_genomes_project 3 95926385 95939709 - MGP_129S1SvImJ_P0062367 Mllt11 protein_coding protein_coding MGP_129S1SvImJ_T0062368.1 MGP_129S1SvImJ_G0027575.1 mouse_genomes_project 3 95934465 95938015 - Mllt11 protein_coding processed_transcript MGP_129S1SvImJ_T0062372.1 MGP_129S1SvImJ_G0027575.1 mouse_genomes_project 3 95935425 95937941 - Mllt11 protein_coding processed_transcript MGP_129S1SvImJ_T0062152.1 MGP_129S1SvImJ_G0027522.1 mouse_genomes_project 3 93396596 93398456 - MGP_129S1SvImJ_P0062152 Lce3a protein_coding protein_coding MGP_129S1SvImJ_T0063553.1 MGP_129S1SvImJ_G0027844.1 mouse_genomes_project 3 125220335 125225864 + MGP_129S1SvImJ_P0063553 1810037I17Rik protein_coding protein_coding MGP_129S1SvImJ_T0064488.1 MGP_129S1SvImJ_G0028012.1 mouse_genomes_project 3 161705677 161787277 + MGP_129S1SvImJ_P0064488 Ptger3 protein_coding protein_coding MGP_129S1SvImJ_T0064489.1 MGP_129S1SvImJ_G0028012.1 mouse_genomes_project 3 161705685 161747246 + Ptger3 protein_coding retained_intron MGP_129S1SvImJ_T0064490.1 MGP_129S1SvImJ_G0028012.1 mouse_genomes_project 3 161705685 161786145 + MGP_129S1SvImJ_P0064490 Ptger3 protein_coding protein_coding MGP_129S1SvImJ_T0062999.1 MGP_129S1SvImJ_G0027718.1 mouse_genomes_project 3 107053162 107062379 - MGP_129S1SvImJ_P0062999 Ddx20 protein_coding protein_coding MGP_129S1SvImJ_T0063000.1 MGP_129S1SvImJ_G0027718.1 mouse_genomes_project 3 107054512 107062257 - MGP_129S1SvImJ_P0063000 Ddx20 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063001.1 MGP_129S1SvImJ_G0027718.1 mouse_genomes_project 3 107056381 107062249 - Ddx20 protein_coding retained_intron MGP_129S1SvImJ_T0060381.1 MGP_129S1SvImJ_G0027138.1 mouse_genomes_project 3 30122272 30136696 + MGP_129S1SvImJ_P0060381 Zfp639 protein_coding protein_coding MGP_129S1SvImJ_T0060382.1 MGP_129S1SvImJ_G0027138.1 mouse_genomes_project 3 30122548 30136606 + MGP_129S1SvImJ_P0060382 Zfp639 protein_coding protein_coding MGP_129S1SvImJ_T0060383.1 MGP_129S1SvImJ_G0027138.1 mouse_genomes_project 3 30122677 30135429 + MGP_129S1SvImJ_P0060383 Zfp639 protein_coding protein_coding MGP_129S1SvImJ_T0060384.1 MGP_129S1SvImJ_G0027138.1 mouse_genomes_project 3 30122909 30125189 + Zfp639 protein_coding processed_transcript MGP_129S1SvImJ_T0060385.1 MGP_129S1SvImJ_G0027138.1 mouse_genomes_project 3 30124191 30135492 + Zfp639 protein_coding retained_intron MGP_129S1SvImJ_T0060386.1 MGP_129S1SvImJ_G0027138.1 mouse_genomes_project 3 30125013 30135431 + MGP_129S1SvImJ_P0060386 Zfp639 protein_coding protein_coding MGP_129S1SvImJ_T0060387.1 MGP_129S1SvImJ_G0027138.1 mouse_genomes_project 3 30131157 30136548 + MGP_129S1SvImJ_P0060387 Zfp639 protein_coding protein_coding MGP_129S1SvImJ_T0060388.1 MGP_129S1SvImJ_G0027138.1 mouse_genomes_project 3 30132942 30136380 + MGP_129S1SvImJ_P0060388 Zfp639 protein_coding protein_coding MGP_129S1SvImJ_T0060389.1 MGP_129S1SvImJ_G0027138.1 mouse_genomes_project 3 30134661 30135423 + Zfp639 protein_coding retained_intron MGP_129S1SvImJ_T0099799.1 MGP_129S1SvImJ_G0037866.1 mouse_genomes_project 3 149895049 149895152 - Gm22078 snRNA snRNA MGP_129S1SvImJ_T0013990.1 MGP_129S1SvImJ_G0012079.1 mouse_genomes_project 3 28056849 28057321 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061586.1 MGP_129S1SvImJ_G0027390.1 mouse_genomes_project 3 88481377 88487123 - MGP_129S1SvImJ_P0061586 Tmem79 protein_coding protein_coding MGP_129S1SvImJ_T0061587.1 MGP_129S1SvImJ_G0027390.1 mouse_genomes_project 3 88481768 88486887 - MGP_129S1SvImJ_P0061587 Tmem79 protein_coding protein_coding MGP_129S1SvImJ_T0061588.1 MGP_129S1SvImJ_G0027390.1 mouse_genomes_project 3 88481769 88487073 - MGP_129S1SvImJ_P0061588 Tmem79 protein_coding protein_coding MGP_129S1SvImJ_T0061589.1 MGP_129S1SvImJ_G0027390.1 mouse_genomes_project 3 88485756 88488767 - MGP_129S1SvImJ_P0061589 Tmem79 protein_coding protein_coding MGP_129S1SvImJ_T0007716.1 MGP_129S1SvImJ_G0006312.1 mouse_genomes_project 3 135625616 135661746 - Gm29811 lincRNA lincRNA MGP_129S1SvImJ_T0007582.1 MGP_129S1SvImJ_G0006209.1 mouse_genomes_project 3 72757660 72892254 - lincRNA lincRNA MGP_129S1SvImJ_T0062190.1 MGP_129S1SvImJ_G0027547.1 mouse_genomes_project 3 94944848 94971318 + MGP_129S1SvImJ_P0062190 Rorc protein_coding protein_coding MGP_129S1SvImJ_T0062191.1 MGP_129S1SvImJ_G0027547.1 mouse_genomes_project 3 94949476 94971754 + MGP_129S1SvImJ_P0062191 Rorc protein_coding protein_coding MGP_129S1SvImJ_T0062192.1 MGP_129S1SvImJ_G0027547.1 mouse_genomes_project 3 94949504 94971124 + Rorc protein_coding retained_intron MGP_129S1SvImJ_T0062193.1 MGP_129S1SvImJ_G0027547.1 mouse_genomes_project 3 94949560 94971126 + MGP_129S1SvImJ_P0062193 Rorc protein_coding protein_coding MGP_129S1SvImJ_T0010541.1 MGP_129S1SvImJ_G0008657.1 mouse_genomes_project 3 88704599 88704681 - Mir1905 miRNA miRNA MGP_129S1SvImJ_T0004264.1 MGP_129S1SvImJ_G0003754.1 mouse_genomes_project 3 58219942 58227988 + Gm38186 antisense antisense MGP_129S1SvImJ_T0004341.1 MGP_129S1SvImJ_G0003807.1 mouse_genomes_project 3 105269092 105273138 - Phtf1os antisense antisense MGP_129S1SvImJ_T0101061.1 MGP_129S1SvImJ_G0039128.1 mouse_genomes_project 3 117943457 117943589 - Gm26344 snoRNA snoRNA MGP_129S1SvImJ_T0098888.1 MGP_129S1SvImJ_G0036966.1 mouse_genomes_project 3 102778573 102779894 - Gm42941 sense_intronic sense_intronic MGP_129S1SvImJ_T0061440.1 MGP_129S1SvImJ_G0027358.1 mouse_genomes_project 3 87072176 87074772 - MGP_129S1SvImJ_P0061440 protein_coding protein_coding MGP_129S1SvImJ_T0060084.1 MGP_129S1SvImJ_G0027073.1 mouse_genomes_project 3 11656957 11696046 + MGP_129S1SvImJ_P0060084 Lrrcc1 protein_coding protein_coding MGP_129S1SvImJ_T0060085.1 MGP_129S1SvImJ_G0027073.1 mouse_genomes_project 3 11656992 11691634 + MGP_129S1SvImJ_P0060085 Lrrcc1 protein_coding protein_coding MGP_129S1SvImJ_T0060086.1 MGP_129S1SvImJ_G0027073.1 mouse_genomes_project 3 11656993 11689436 + MGP_129S1SvImJ_P0060086 Lrrcc1 protein_coding protein_coding MGP_129S1SvImJ_T0060087.1 MGP_129S1SvImJ_G0027073.1 mouse_genomes_project 3 11657048 11685481 + MGP_129S1SvImJ_P0060087 Lrrcc1 protein_coding protein_coding MGP_129S1SvImJ_T0060088.1 MGP_129S1SvImJ_G0027073.1 mouse_genomes_project 3 11657103 11674788 + MGP_129S1SvImJ_P0060088 Lrrcc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060089.1 MGP_129S1SvImJ_G0027073.1 mouse_genomes_project 3 11671434 11689739 + MGP_129S1SvImJ_P0060089 Lrrcc1 protein_coding protein_coding MGP_129S1SvImJ_T0060090.1 MGP_129S1SvImJ_G0027073.1 mouse_genomes_project 3 11671510 11677788 + MGP_129S1SvImJ_P0060090 Lrrcc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060091.1 MGP_129S1SvImJ_G0027073.1 mouse_genomes_project 3 11673694 11682640 + MGP_129S1SvImJ_P0060091 Lrrcc1 protein_coding protein_coding MGP_129S1SvImJ_T0001421.1 MGP_129S1SvImJ_G0001344.1 mouse_genomes_project 3 162461369 162465708 + TEC TEC MGP_129S1SvImJ_T0014242.1 MGP_129S1SvImJ_G0012331.1 mouse_genomes_project 3 105425352 105426190 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060614.1 MGP_129S1SvImJ_G0027175.1 mouse_genomes_project 3 36332701 36370054 - MGP_129S1SvImJ_P0060614 protein_coding protein_coding MGP_129S1SvImJ_T0060615.1 MGP_129S1SvImJ_G0027175.1 mouse_genomes_project 3 36333093 36368303 - MGP_129S1SvImJ_P0060615 protein_coding protein_coding MGP_129S1SvImJ_T0060616.1 MGP_129S1SvImJ_G0027175.1 mouse_genomes_project 3 36335514 36338992 - MGP_129S1SvImJ_P0060616 protein_coding protein_coding MGP_129S1SvImJ_T0060617.1 MGP_129S1SvImJ_G0027175.1 mouse_genomes_project 3 36368462 36370025 - protein_coding processed_transcript MGP_129S1SvImJ_T0014035.1 MGP_129S1SvImJ_G0012124.1 mouse_genomes_project 3 43869205 43869566 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102482.1 MGP_129S1SvImJ_G0040316.1 mouse_genomes_project 3 94449770 94450180 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0062426.1 MGP_129S1SvImJ_G0027585.1 mouse_genomes_project 3 96232168 96249997 + MGP_129S1SvImJ_P0062426 Ctsk protein_coding protein_coding MGP_129S1SvImJ_T0098927.1 MGP_129S1SvImJ_G0037005.1 mouse_genomes_project 3 147834043 147834816 - Gm43560 sense_intronic sense_intronic MGP_129S1SvImJ_T0099726.1 MGP_129S1SvImJ_G0037793.1 mouse_genomes_project 3 37601024 37601184 + Gm23796 snRNA snRNA MGP_129S1SvImJ_T0060012.1 MGP_129S1SvImJ_G0027050.1 mouse_genomes_project 3 4328021 4380722 + MGP_129S1SvImJ_P0060012 Zc2hc1a protein_coding protein_coding MGP_129S1SvImJ_T0060013.1 MGP_129S1SvImJ_G0027050.1 mouse_genomes_project 3 4328024 4378961 + MGP_129S1SvImJ_P0060013 Zc2hc1a protein_coding protein_coding MGP_129S1SvImJ_T0060014.1 MGP_129S1SvImJ_G0027050.1 mouse_genomes_project 3 4365928 4378387 + Zc2hc1a protein_coding retained_intron MGP_129S1SvImJ_T0001196.1 MGP_129S1SvImJ_G0001122.1 mouse_genomes_project 3 47519245 47520310 + TEC TEC MGP_129S1SvImJ_T0004382.1 MGP_129S1SvImJ_G0003832.1 mouse_genomes_project 3 129608801 129616848 + Gm16958 antisense antisense MGP_129S1SvImJ_T0004383.1 MGP_129S1SvImJ_G0003832.1 mouse_genomes_project 3 129608835 129615877 + Gm16958 antisense antisense MGP_129S1SvImJ_T0014163.1 MGP_129S1SvImJ_G0012252.1 mouse_genomes_project 3 85937318 85937606 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014212.1 MGP_129S1SvImJ_G0012301.1 mouse_genomes_project 3 97555370 97555850 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099765.1 MGP_129S1SvImJ_G0037832.1 mouse_genomes_project 3 90878903 90879009 + Gm24593 snRNA snRNA MGP_129S1SvImJ_T0001190.1 MGP_129S1SvImJ_G0001116.1 mouse_genomes_project 3 43429038 43431616 - TEC TEC MGP_129S1SvImJ_T0063888.1 MGP_129S1SvImJ_G0027904.1 mouse_genomes_project 3 138179733 138216053 + MGP_129S1SvImJ_P0063888 Slc9b2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063889.1 MGP_129S1SvImJ_G0027904.1 mouse_genomes_project 3 138179764 138196873 + Slc9b2 protein_coding retained_intron MGP_129S1SvImJ_T0063890.1 MGP_129S1SvImJ_G0027904.1 mouse_genomes_project 3 138179775 138190371 + MGP_129S1SvImJ_P0063890 Slc9b2 protein_coding protein_coding MGP_129S1SvImJ_T0063891.1 MGP_129S1SvImJ_G0027904.1 mouse_genomes_project 3 138179778 138218657 + MGP_129S1SvImJ_P0063891 Slc9b2 protein_coding protein_coding MGP_129S1SvImJ_T0063892.1 MGP_129S1SvImJ_G0027904.1 mouse_genomes_project 3 138202394 138216288 + Slc9b2 protein_coding retained_intron MGP_129S1SvImJ_T0063824.1 MGP_129S1SvImJ_G0027892.1 mouse_genomes_project 3 135434009 135458352 - MGP_129S1SvImJ_P0063824 Aimp1 protein_coding protein_coding MGP_129S1SvImJ_T0063825.1 MGP_129S1SvImJ_G0027892.1 mouse_genomes_project 3 135445370 135448359 - Aimp1 protein_coding retained_intron MGP_129S1SvImJ_T0063826.1 MGP_129S1SvImJ_G0027892.1 mouse_genomes_project 3 135445633 135451702 - Aimp1 protein_coding retained_intron MGP_129S1SvImJ_T0063827.1 MGP_129S1SvImJ_G0027892.1 mouse_genomes_project 3 135447588 135458838 - MGP_129S1SvImJ_P0063827 Aimp1 protein_coding protein_coding MGP_129S1SvImJ_T0063828.1 MGP_129S1SvImJ_G0027892.1 mouse_genomes_project 3 135447678 135458590 - MGP_129S1SvImJ_P0063828 Aimp1 protein_coding protein_coding MGP_129S1SvImJ_T0063829.1 MGP_129S1SvImJ_G0027892.1 mouse_genomes_project 3 135447694 135458305 - MGP_129S1SvImJ_P0063829 Aimp1 protein_coding protein_coding MGP_129S1SvImJ_T0063830.1 MGP_129S1SvImJ_G0027892.1 mouse_genomes_project 3 135448389 135458592 - MGP_129S1SvImJ_P0063830 Aimp1 protein_coding protein_coding MGP_129S1SvImJ_T0063831.1 MGP_129S1SvImJ_G0027892.1 mouse_genomes_project 3 135454341 135458304 - Aimp1 protein_coding retained_intron MGP_129S1SvImJ_T0102509.1 MGP_129S1SvImJ_G0040343.1 mouse_genomes_project 3 145870810 145880705 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0061844.1 MGP_129S1SvImJ_G0027430.1 mouse_genomes_project 3 89523308 89532375 - MGP_129S1SvImJ_P0061844 Efna3 protein_coding protein_coding MGP_129S1SvImJ_T0061845.1 MGP_129S1SvImJ_G0027430.1 mouse_genomes_project 3 89524773 89532297 - MGP_129S1SvImJ_P0061845 Efna3 protein_coding protein_coding MGP_129S1SvImJ_T0061846.1 MGP_129S1SvImJ_G0027430.1 mouse_genomes_project 3 89525268 89531041 - Efna3 protein_coding processed_transcript MGP_129S1SvImJ_T0004349.1 MGP_129S1SvImJ_G0003813.1 mouse_genomes_project 3 109405085 109413634 - 4933431E20Rik antisense antisense MGP_129S1SvImJ_T0004350.1 MGP_129S1SvImJ_G0003813.1 mouse_genomes_project 3 109407453 109413187 - 4933431E20Rik antisense antisense MGP_129S1SvImJ_T0004351.1 MGP_129S1SvImJ_G0003813.1 mouse_genomes_project 3 109408891 109413219 - 4933431E20Rik antisense antisense MGP_129S1SvImJ_T0004352.1 MGP_129S1SvImJ_G0003813.1 mouse_genomes_project 3 109410284 109413113 - 4933431E20Rik antisense antisense MGP_129S1SvImJ_T0004353.1 MGP_129S1SvImJ_G0003813.1 mouse_genomes_project 3 109410315 109413194 - 4933431E20Rik antisense antisense MGP_129S1SvImJ_T0004354.1 MGP_129S1SvImJ_G0003813.1 mouse_genomes_project 3 109410544 109413230 - 4933431E20Rik antisense antisense MGP_129S1SvImJ_T0004355.1 MGP_129S1SvImJ_G0003813.1 mouse_genomes_project 3 109410643 109413195 - 4933431E20Rik antisense antisense MGP_129S1SvImJ_T0004356.1 MGP_129S1SvImJ_G0003813.1 mouse_genomes_project 3 109410687 109413204 - 4933431E20Rik antisense antisense MGP_129S1SvImJ_T0004357.1 MGP_129S1SvImJ_G0003813.1 mouse_genomes_project 3 109410839 109413210 - 4933431E20Rik antisense antisense MGP_129S1SvImJ_T0004358.1 MGP_129S1SvImJ_G0003813.1 mouse_genomes_project 3 109410893 109413221 - 4933431E20Rik antisense antisense MGP_129S1SvImJ_T0004359.1 MGP_129S1SvImJ_G0003813.1 mouse_genomes_project 3 109410923 109413184 - 4933431E20Rik antisense antisense MGP_129S1SvImJ_T0004360.1 MGP_129S1SvImJ_G0003813.1 mouse_genomes_project 3 109411549 109413233 - 4933431E20Rik antisense antisense MGP_129S1SvImJ_T0060752.1 MGP_129S1SvImJ_G0027197.1 mouse_genomes_project 3 49886075 49949043 + Naa15 protein_coding processed_transcript MGP_129S1SvImJ_T0060753.1 MGP_129S1SvImJ_G0027197.1 mouse_genomes_project 3 49886102 49950273 + MGP_129S1SvImJ_P0060753 Naa15 protein_coding protein_coding MGP_129S1SvImJ_T0060754.1 MGP_129S1SvImJ_G0027197.1 mouse_genomes_project 3 49886393 49920333 + MGP_129S1SvImJ_P0060754 Naa15 protein_coding protein_coding MGP_129S1SvImJ_T0060755.1 MGP_129S1SvImJ_G0027197.1 mouse_genomes_project 3 49918531 49921361 + Naa15 protein_coding retained_intron MGP_129S1SvImJ_T0060756.1 MGP_129S1SvImJ_G0027197.1 mouse_genomes_project 3 49919520 49926024 + MGP_129S1SvImJ_P0060756 Naa15 protein_coding protein_coding MGP_129S1SvImJ_T0060757.1 MGP_129S1SvImJ_G0027197.1 mouse_genomes_project 3 49937223 49940795 + Naa15 protein_coding retained_intron MGP_129S1SvImJ_T0060758.1 MGP_129S1SvImJ_G0027197.1 mouse_genomes_project 3 49938212 49940531 + Naa15 protein_coding retained_intron MGP_129S1SvImJ_T0060759.1 MGP_129S1SvImJ_G0027197.1 mouse_genomes_project 3 49946618 49949691 + Naa15 protein_coding retained_intron MGP_129S1SvImJ_T0010525.1 MGP_129S1SvImJ_G0008641.1 mouse_genomes_project 3 36446090 36446196 - Gm24462 miRNA miRNA MGP_129S1SvImJ_T0004416.1 MGP_129S1SvImJ_G0003856.1 mouse_genomes_project 3 150170987 150180755 + Gm16325 antisense antisense MGP_129S1SvImJ_T0004417.1 MGP_129S1SvImJ_G0003856.1 mouse_genomes_project 3 150177648 150178552 + Gm16325 antisense antisense MGP_129S1SvImJ_T0007621.1 MGP_129S1SvImJ_G0006234.1 mouse_genomes_project 3 88692913 88694203 - Gm37584 lincRNA lincRNA MGP_129S1SvImJ_T0007743.1 MGP_129S1SvImJ_G0006337.1 mouse_genomes_project 3 146472158 146488543 + A830019L24Rik lincRNA lincRNA MGP_129S1SvImJ_T0007744.1 MGP_129S1SvImJ_G0006337.1 mouse_genomes_project 3 146472633 146490378 + A830019L24Rik lincRNA lincRNA MGP_129S1SvImJ_T0063960.1 MGP_129S1SvImJ_G0027914.1 mouse_genomes_project 3 140346098 140438768 + MGP_129S1SvImJ_P0063960 Emcn protein_coding protein_coding MGP_129S1SvImJ_T0063961.1 MGP_129S1SvImJ_G0027914.1 mouse_genomes_project 3 140346121 140428523 + Emcn protein_coding retained_intron MGP_129S1SvImJ_T0063962.1 MGP_129S1SvImJ_G0027914.1 mouse_genomes_project 3 140346174 140437652 + MGP_129S1SvImJ_P0063962 Emcn protein_coding protein_coding MGP_129S1SvImJ_T0063963.1 MGP_129S1SvImJ_G0027914.1 mouse_genomes_project 3 140346205 140433927 + MGP_129S1SvImJ_P0063963 Emcn protein_coding protein_coding MGP_129S1SvImJ_T0014081.1 MGP_129S1SvImJ_G0012170.1 mouse_genomes_project 3 58585717 58585831 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014370.1 MGP_129S1SvImJ_G0012459.1 mouse_genomes_project 3 147935652 147936214 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014000.1 MGP_129S1SvImJ_G0012089.1 mouse_genomes_project 3 33270978 33271414 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007765.1 MGP_129S1SvImJ_G0006355.1 mouse_genomes_project 3 149871528 149883314 - Gm10636 lincRNA lincRNA MGP_129S1SvImJ_T0007610.1 MGP_129S1SvImJ_G0006233.1 mouse_genomes_project 3 88355125 88359608 + Gm3764 lincRNA lincRNA MGP_129S1SvImJ_T0007611.1 MGP_129S1SvImJ_G0006233.1 mouse_genomes_project 3 88355138 88373732 + Gm3764 lincRNA lincRNA MGP_129S1SvImJ_T0007612.1 MGP_129S1SvImJ_G0006233.1 mouse_genomes_project 3 88355624 88374289 + Gm3764 lincRNA lincRNA MGP_129S1SvImJ_T0007613.1 MGP_129S1SvImJ_G0006233.1 mouse_genomes_project 3 88357784 88372582 + Gm3764 lincRNA lincRNA MGP_129S1SvImJ_T0007614.1 MGP_129S1SvImJ_G0006233.1 mouse_genomes_project 3 88362825 88370154 + Gm3764 lincRNA lincRNA MGP_129S1SvImJ_T0007615.1 MGP_129S1SvImJ_G0006233.1 mouse_genomes_project 3 88362835 88374340 + Gm3764 lincRNA lincRNA MGP_129S1SvImJ_T0007616.1 MGP_129S1SvImJ_G0006233.1 mouse_genomes_project 3 88370957 88372596 + Gm3764 lincRNA lincRNA MGP_129S1SvImJ_T0007617.1 MGP_129S1SvImJ_G0006233.1 mouse_genomes_project 3 88372573 88378253 + Gm3764 lincRNA lincRNA MGP_129S1SvImJ_T0007618.1 MGP_129S1SvImJ_G0006233.1 mouse_genomes_project 3 88374226 88376304 + Gm3764 lincRNA lincRNA MGP_129S1SvImJ_T0007619.1 MGP_129S1SvImJ_G0006233.1 mouse_genomes_project 3 88376861 88378064 + Gm3764 lincRNA lincRNA MGP_129S1SvImJ_T0007620.1 MGP_129S1SvImJ_G0006233.1 mouse_genomes_project 3 88377076 88378253 + Gm3764 lincRNA lincRNA MGP_129S1SvImJ_T0060419.1 MGP_129S1SvImJ_G0027143.1 mouse_genomes_project 3 30360249 30372078 + MGP_129S1SvImJ_P0060419 Ndufb5 protein_coding protein_coding MGP_129S1SvImJ_T0060420.1 MGP_129S1SvImJ_G0027143.1 mouse_genomes_project 3 30360254 30363434 + Ndufb5 protein_coding retained_intron MGP_129S1SvImJ_T0060421.1 MGP_129S1SvImJ_G0027143.1 mouse_genomes_project 3 30360260 30374743 + MGP_129S1SvImJ_P0060421 Ndufb5 protein_coding protein_coding MGP_129S1SvImJ_T0060422.1 MGP_129S1SvImJ_G0027143.1 mouse_genomes_project 3 30360284 30374424 + MGP_129S1SvImJ_P0060422 Ndufb5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060423.1 MGP_129S1SvImJ_G0027143.1 mouse_genomes_project 3 30360285 30371649 + MGP_129S1SvImJ_P0060423 Ndufb5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060424.1 MGP_129S1SvImJ_G0027143.1 mouse_genomes_project 3 30364826 30374280 + MGP_129S1SvImJ_P0060424 Ndufb5 protein_coding protein_coding MGP_129S1SvImJ_T0064081.1 MGP_129S1SvImJ_G0027941.1 mouse_genomes_project 3 145662509 145704219 + MGP_129S1SvImJ_P0064081 Gbp5 protein_coding protein_coding MGP_129S1SvImJ_T0064082.1 MGP_129S1SvImJ_G0027941.1 mouse_genomes_project 3 145677068 145699716 + Gbp5 protein_coding processed_transcript MGP_129S1SvImJ_T0064083.1 MGP_129S1SvImJ_G0027941.1 mouse_genomes_project 3 145691406 145695957 + Gbp5 protein_coding retained_intron MGP_129S1SvImJ_T0064127.1 MGP_129S1SvImJ_G0027950.1 mouse_genomes_project 3 147727743 147881748 - MGP_129S1SvImJ_P0064127 Hs2st1 protein_coding protein_coding MGP_129S1SvImJ_T0064128.1 MGP_129S1SvImJ_G0027950.1 mouse_genomes_project 3 147753777 147881448 - MGP_129S1SvImJ_P0064128 Hs2st1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064129.1 MGP_129S1SvImJ_G0027950.1 mouse_genomes_project 3 147879404 147881725 - Hs2st1 protein_coding retained_intron MGP_129S1SvImJ_T0064524.1 MGP_129S1SvImJ_G0028016.1 mouse_genomes_project 3 162194863 162226470 + MGP_129S1SvImJ_P0064524 Lrrc40 protein_coding protein_coding MGP_129S1SvImJ_T0064525.1 MGP_129S1SvImJ_G0028016.1 mouse_genomes_project 3 162194901 162225072 + MGP_129S1SvImJ_P0064525 Lrrc40 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064526.1 MGP_129S1SvImJ_G0028016.1 mouse_genomes_project 3 162194903 162225072 + MGP_129S1SvImJ_P0064526 Lrrc40 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064527.1 MGP_129S1SvImJ_G0028016.1 mouse_genomes_project 3 162194923 162209829 + MGP_129S1SvImJ_P0064527 Lrrc40 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064528.1 MGP_129S1SvImJ_G0028016.1 mouse_genomes_project 3 162194951 162209818 + MGP_129S1SvImJ_P0064528 Lrrc40 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064529.1 MGP_129S1SvImJ_G0028016.1 mouse_genomes_project 3 162195061 162209764 + MGP_129S1SvImJ_P0064529 Lrrc40 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064530.1 MGP_129S1SvImJ_G0028016.1 mouse_genomes_project 3 162220268 162224529 + Lrrc40 protein_coding retained_intron MGP_129S1SvImJ_T0064531.1 MGP_129S1SvImJ_G0028016.1 mouse_genomes_project 3 162220669 162222047 + Lrrc40 protein_coding retained_intron MGP_129S1SvImJ_T0063112.1 MGP_129S1SvImJ_G0027751.1 mouse_genomes_project 3 109094477 109105011 + MGP_129S1SvImJ_P0063112 Alx3 protein_coding protein_coding MGP_129S1SvImJ_T0102511.1 MGP_129S1SvImJ_G0040345.1 mouse_genomes_project 3 160926203 160926678 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0063157.1 MGP_129S1SvImJ_G0027762.1 mouse_genomes_project 3 109539011 109544784 - MGP_129S1SvImJ_P0063157 Gstm1 protein_coding protein_coding MGP_129S1SvImJ_T0063158.1 MGP_129S1SvImJ_G0027762.1 mouse_genomes_project 3 109539017 109540073 - Gstm1 protein_coding processed_transcript MGP_129S1SvImJ_T0063159.1 MGP_129S1SvImJ_G0027762.1 mouse_genomes_project 3 109539147 109543400 - MGP_129S1SvImJ_P0063159 Gstm1 protein_coding protein_coding MGP_129S1SvImJ_T0063160.1 MGP_129S1SvImJ_G0027762.1 mouse_genomes_project 3 109539383 109544617 - MGP_129S1SvImJ_P0063160 Gstm1 protein_coding protein_coding MGP_129S1SvImJ_T0062769.1 MGP_129S1SvImJ_G0027674.1 mouse_genomes_project 3 102442748 102454951 - MGP_129S1SvImJ_P0062769 Cd2 protein_coding protein_coding MGP_129S1SvImJ_T0062770.1 MGP_129S1SvImJ_G0027674.1 mouse_genomes_project 3 102442757 102447239 - Cd2 protein_coding retained_intron MGP_129S1SvImJ_T0062771.1 MGP_129S1SvImJ_G0027674.1 mouse_genomes_project 3 102450087 102454891 - Cd2 protein_coding retained_intron MGP_129S1SvImJ_T0013911.1 MGP_129S1SvImJ_G0012000.1 mouse_genomes_project 3 1124185 1124402 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007673.1 MGP_129S1SvImJ_G0006279.1 mouse_genomes_project 3 113579470 113787186 + lincRNA lincRNA MGP_129S1SvImJ_T0061525.1 MGP_129S1SvImJ_G0027376.1 mouse_genomes_project 3 88081868 88086575 + MGP_129S1SvImJ_P0061525 Crabp2 protein_coding protein_coding MGP_129S1SvImJ_T0061526.1 MGP_129S1SvImJ_G0027376.1 mouse_genomes_project 3 88085342 88086184 + Crabp2 protein_coding retained_intron MGP_129S1SvImJ_T0063016.1 MGP_129S1SvImJ_G0027723.1 mouse_genomes_project 3 107310477 107318784 - MGP_129S1SvImJ_P0063016 I830077J02Rik protein_coding protein_coding MGP_129S1SvImJ_T0063017.1 MGP_129S1SvImJ_G0027723.1 mouse_genomes_project 3 107312536 107314136 - MGP_129S1SvImJ_P0063017 I830077J02Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063018.1 MGP_129S1SvImJ_G0027723.1 mouse_genomes_project 3 107313822 107318736 - I830077J02Rik protein_coding retained_intron MGP_129S1SvImJ_T0007694.1 MGP_129S1SvImJ_G0006294.1 mouse_genomes_project 3 124901952 124909862 - Gm43568 lincRNA lincRNA MGP_129S1SvImJ_T0007695.1 MGP_129S1SvImJ_G0006294.1 mouse_genomes_project 3 124906911 124909357 - Gm43568 lincRNA lincRNA MGP_129S1SvImJ_T0007696.1 MGP_129S1SvImJ_G0006294.1 mouse_genomes_project 3 124908333 124909579 - Gm43568 lincRNA lincRNA MGP_129S1SvImJ_T0062599.1 MGP_129S1SvImJ_G0027629.1 mouse_genomes_project 3 97588431 97598003 + MGP_129S1SvImJ_P0062599 Pias3 protein_coding protein_coding MGP_129S1SvImJ_T0062600.1 MGP_129S1SvImJ_G0027629.1 mouse_genomes_project 3 97588489 97597515 + MGP_129S1SvImJ_P0062600 Pias3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062601.1 MGP_129S1SvImJ_G0027629.1 mouse_genomes_project 3 97589123 97591748 + MGP_129S1SvImJ_P0062601 Pias3 protein_coding protein_coding MGP_129S1SvImJ_T0062602.1 MGP_129S1SvImJ_G0027629.1 mouse_genomes_project 3 97589130 97598111 + MGP_129S1SvImJ_P0062602 Pias3 protein_coding protein_coding MGP_129S1SvImJ_T0062603.1 MGP_129S1SvImJ_G0027629.1 mouse_genomes_project 3 97589164 97598014 + MGP_129S1SvImJ_P0062603 Pias3 protein_coding protein_coding MGP_129S1SvImJ_T0062604.1 MGP_129S1SvImJ_G0027629.1 mouse_genomes_project 3 97589180 97592039 + Pias3 protein_coding retained_intron MGP_129S1SvImJ_T0062605.1 MGP_129S1SvImJ_G0027629.1 mouse_genomes_project 3 97589241 97593746 + MGP_129S1SvImJ_P0062605 Pias3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062606.1 MGP_129S1SvImJ_G0027629.1 mouse_genomes_project 3 97592532 97595861 + Pias3 protein_coding retained_intron MGP_129S1SvImJ_T0062607.1 MGP_129S1SvImJ_G0027629.1 mouse_genomes_project 3 97593407 97595926 + Pias3 protein_coding retained_intron MGP_129S1SvImJ_T0062608.1 MGP_129S1SvImJ_G0027629.1 mouse_genomes_project 3 97596205 97597174 + MGP_129S1SvImJ_P0062608 Pias3 protein_coding protein_coding MGP_129S1SvImJ_T0063083.1 MGP_129S1SvImJ_G0027740.1 mouse_genomes_project 3 108571248 108578812 + MGP_129S1SvImJ_P0063083 Kcna2 protein_coding protein_coding MGP_129S1SvImJ_T0063084.1 MGP_129S1SvImJ_G0027740.1 mouse_genomes_project 3 108571669 108586068 + MGP_129S1SvImJ_P0063084 Kcna2 protein_coding protein_coding MGP_129S1SvImJ_T0063085.1 MGP_129S1SvImJ_G0027740.1 mouse_genomes_project 3 108572784 108576074 + MGP_129S1SvImJ_P0063085 Kcna2 protein_coding protein_coding MGP_129S1SvImJ_T0014126.1 MGP_129S1SvImJ_G0012215.1 mouse_genomes_project 3 70730625 70731082 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062445.1 MGP_129S1SvImJ_G0027590.1 mouse_genomes_project 3 96423927 96428316 + MGP_129S1SvImJ_P0062445 Mcl1 protein_coding protein_coding MGP_129S1SvImJ_T0062446.1 MGP_129S1SvImJ_G0027590.1 mouse_genomes_project 3 96423996 96425963 + MGP_129S1SvImJ_P0062446 Mcl1 protein_coding protein_coding MGP_129S1SvImJ_T0014136.1 MGP_129S1SvImJ_G0012225.1 mouse_genomes_project 3 73764124 73764590 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061133.1 MGP_129S1SvImJ_G0027284.1 mouse_genomes_project 3 67057902 67237004 + MGP_129S1SvImJ_P0061133 Iqcj protein_coding protein_coding MGP_129S1SvImJ_T0061135.1 MGP_129S1SvImJ_G0027284.1 mouse_genomes_project 3 67057995 67244493 + MGP_129S1SvImJ_P0061135 Iqcj protein_coding unknown_likely_coding MGP_129S1SvImJ_T0061349.1 MGP_129S1SvImJ_G0027338.1 mouse_genomes_project 3 83781862 83936413 - MGP_129S1SvImJ_P0061349 D930015E06Rik protein_coding protein_coding MGP_129S1SvImJ_T0061350.1 MGP_129S1SvImJ_G0027338.1 mouse_genomes_project 3 83782416 83936375 - MGP_129S1SvImJ_P0061350 D930015E06Rik protein_coding protein_coding MGP_129S1SvImJ_T0061351.1 MGP_129S1SvImJ_G0027338.1 mouse_genomes_project 3 83782416 83936413 - MGP_129S1SvImJ_P0061351 D930015E06Rik protein_coding protein_coding MGP_129S1SvImJ_T0061352.1 MGP_129S1SvImJ_G0027338.1 mouse_genomes_project 3 83782417 83793455 - D930015E06Rik protein_coding processed_transcript MGP_129S1SvImJ_T0061353.1 MGP_129S1SvImJ_G0027338.1 mouse_genomes_project 3 83784570 83791820 - D930015E06Rik protein_coding retained_intron MGP_129S1SvImJ_T0061354.1 MGP_129S1SvImJ_G0027338.1 mouse_genomes_project 3 83784584 83793781 - D930015E06Rik protein_coding retained_intron MGP_129S1SvImJ_T0061355.1 MGP_129S1SvImJ_G0027338.1 mouse_genomes_project 3 83805580 83856664 - D930015E06Rik protein_coding processed_transcript MGP_129S1SvImJ_T0061356.1 MGP_129S1SvImJ_G0027338.1 mouse_genomes_project 3 83824593 83827891 - D930015E06Rik protein_coding processed_transcript MGP_129S1SvImJ_T0061357.1 MGP_129S1SvImJ_G0027338.1 mouse_genomes_project 3 83926559 83936366 - D930015E06Rik protein_coding retained_intron MGP_129S1SvImJ_T0061358.1 MGP_129S1SvImJ_G0027338.1 mouse_genomes_project 3 83933416 83936399 - D930015E06Rik protein_coding retained_intron MGP_129S1SvImJ_T0061359.1 MGP_129S1SvImJ_G0027338.1 mouse_genomes_project 3 83933614 83936372 - D930015E06Rik protein_coding retained_intron MGP_129S1SvImJ_T0064153.1 MGP_129S1SvImJ_G0027958.1 mouse_genomes_project 3 148503820 148507614 + Odf2l protein_coding retained_intron MGP_129S1SvImJ_T0064154.1 MGP_129S1SvImJ_G0027958.1 mouse_genomes_project 3 148503821 148543784 + MGP_129S1SvImJ_P0064154 Odf2l protein_coding protein_coding MGP_129S1SvImJ_T0064155.1 MGP_129S1SvImJ_G0027958.1 mouse_genomes_project 3 148503821 148543804 + MGP_129S1SvImJ_P0064155 Odf2l protein_coding protein_coding MGP_129S1SvImJ_T0064156.1 MGP_129S1SvImJ_G0027958.1 mouse_genomes_project 3 148503832 148522604 + Odf2l protein_coding retained_intron MGP_129S1SvImJ_T0064157.1 MGP_129S1SvImJ_G0027958.1 mouse_genomes_project 3 148503832 148543774 + MGP_129S1SvImJ_P0064157 Odf2l protein_coding protein_coding MGP_129S1SvImJ_T0064158.1 MGP_129S1SvImJ_G0027958.1 mouse_genomes_project 3 148503840 148522515 + Odf2l protein_coding retained_intron MGP_129S1SvImJ_T0064159.1 MGP_129S1SvImJ_G0027958.1 mouse_genomes_project 3 148503852 148543778 + MGP_129S1SvImJ_P0064159 Odf2l protein_coding protein_coding MGP_129S1SvImJ_T0064160.1 MGP_129S1SvImJ_G0027958.1 mouse_genomes_project 3 148503853 148514234 + MGP_129S1SvImJ_P0064160 Odf2l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064161.1 MGP_129S1SvImJ_G0027958.1 mouse_genomes_project 3 148504206 148504862 + Odf2l protein_coding processed_transcript MGP_129S1SvImJ_T0064162.1 MGP_129S1SvImJ_G0027958.1 mouse_genomes_project 3 148504206 148511374 + MGP_129S1SvImJ_P0064162 Odf2l protein_coding protein_coding MGP_129S1SvImJ_T0064163.1 MGP_129S1SvImJ_G0027958.1 mouse_genomes_project 3 148505878 148514226 + MGP_129S1SvImJ_P0064163 Odf2l protein_coding protein_coding MGP_129S1SvImJ_T0064164.1 MGP_129S1SvImJ_G0027958.1 mouse_genomes_project 3 148513089 148530022 + MGP_129S1SvImJ_P0064164 Odf2l protein_coding protein_coding MGP_129S1SvImJ_T0064165.1 MGP_129S1SvImJ_G0027958.1 mouse_genomes_project 3 148517843 148539010 + Odf2l protein_coding retained_intron MGP_129S1SvImJ_T0064166.1 MGP_129S1SvImJ_G0027958.1 mouse_genomes_project 3 148524764 148539010 + Odf2l protein_coding retained_intron MGP_129S1SvImJ_T0064167.1 MGP_129S1SvImJ_G0027958.1 mouse_genomes_project 3 148524973 148532921 + Odf2l protein_coding processed_transcript MGP_129S1SvImJ_T0064168.1 MGP_129S1SvImJ_G0027958.1 mouse_genomes_project 3 148524982 148543782 + Odf2l protein_coding retained_intron MGP_129S1SvImJ_T0064169.1 MGP_129S1SvImJ_G0027958.1 mouse_genomes_project 3 148525004 148538962 + MGP_129S1SvImJ_P0064169 Odf2l protein_coding protein_coding MGP_129S1SvImJ_T0064170.1 MGP_129S1SvImJ_G0027958.1 mouse_genomes_project 3 148538950 148543559 + MGP_129S1SvImJ_P0064170 Odf2l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061905.1 MGP_129S1SvImJ_G0027443.1 mouse_genomes_project 3 89745768 89896671 + MGP_129S1SvImJ_P0061905 Kcnn3 protein_coding protein_coding MGP_129S1SvImJ_T0061906.1 MGP_129S1SvImJ_G0027443.1 mouse_genomes_project 3 89891427 89904051 + Kcnn3 protein_coding retained_intron MGP_129S1SvImJ_T0060816.1 MGP_129S1SvImJ_G0027211.1 mouse_genomes_project 3 53025389 53055315 + MGP_129S1SvImJ_P0060816 Postn protein_coding protein_coding MGP_129S1SvImJ_T0060817.1 MGP_129S1SvImJ_G0027211.1 mouse_genomes_project 3 53025389 53055318 + MGP_129S1SvImJ_P0060817 Postn protein_coding protein_coding MGP_129S1SvImJ_T0060818.1 MGP_129S1SvImJ_G0027211.1 mouse_genomes_project 3 53025405 53055315 + MGP_129S1SvImJ_P0060818 Postn protein_coding protein_coding MGP_129S1SvImJ_T0060819.1 MGP_129S1SvImJ_G0027211.1 mouse_genomes_project 3 53025423 53054733 + MGP_129S1SvImJ_P0060819 Postn protein_coding protein_coding MGP_129S1SvImJ_T0060820.1 MGP_129S1SvImJ_G0027211.1 mouse_genomes_project 3 53041840 53054928 + MGP_129S1SvImJ_P0060820 Postn protein_coding protein_coding MGP_129S1SvImJ_T0060821.1 MGP_129S1SvImJ_G0027211.1 mouse_genomes_project 3 53042764 53048993 + Postn protein_coding retained_intron MGP_129S1SvImJ_T0060822.1 MGP_129S1SvImJ_G0027211.1 mouse_genomes_project 3 53047387 53054768 + Postn protein_coding retained_intron MGP_129S1SvImJ_T0060823.1 MGP_129S1SvImJ_G0027211.1 mouse_genomes_project 3 53047389 53054863 + Postn protein_coding retained_intron MGP_129S1SvImJ_T0060824.1 MGP_129S1SvImJ_G0027211.1 mouse_genomes_project 3 53053169 53054674 + Postn protein_coding retained_intron MGP_129S1SvImJ_T0063081.1 MGP_129S1SvImJ_G0027738.1 mouse_genomes_project 3 108286190 108287217 - MGP_129S1SvImJ_P0063081 Olfr266 protein_coding protein_coding MGP_129S1SvImJ_T0061247.1 MGP_129S1SvImJ_G0027311.1 mouse_genomes_project 3 79002426 79102930 + MGP_129S1SvImJ_P0061247 protein_coding protein_coding MGP_129S1SvImJ_T0061248.1 MGP_129S1SvImJ_G0027311.1 mouse_genomes_project 3 79011762 79153363 + MGP_129S1SvImJ_P0061248 protein_coding protein_coding MGP_129S1SvImJ_T0061249.1 MGP_129S1SvImJ_G0027311.1 mouse_genomes_project 3 79011765 79104188 + MGP_129S1SvImJ_P0061249 protein_coding protein_coding MGP_129S1SvImJ_T0064464.1 MGP_129S1SvImJ_G0028007.1 mouse_genomes_project 3 159117053 159125534 - MGP_129S1SvImJ_P0064464 Fpgt protein_coding protein_coding MGP_129S1SvImJ_T0064465.1 MGP_129S1SvImJ_G0028007.1 mouse_genomes_project 3 159119854 159125328 - Fpgt protein_coding processed_transcript MGP_129S1SvImJ_T0064466.1 MGP_129S1SvImJ_G0028007.1 mouse_genomes_project 3 159121163 159122655 - Fpgt protein_coding retained_intron MGP_129S1SvImJ_T0064467.1 MGP_129S1SvImJ_G0028007.1 mouse_genomes_project 3 159123078 159125499 - Fpgt protein_coding retained_intron MGP_129S1SvImJ_T0064468.1 MGP_129S1SvImJ_G0028007.1 mouse_genomes_project 3 159123455 159124686 - Fpgt protein_coding processed_transcript MGP_129S1SvImJ_T0064469.1 MGP_129S1SvImJ_G0028007.1 mouse_genomes_project 3 159123540 159125358 - Fpgt protein_coding processed_transcript MGP_129S1SvImJ_T0007446.1 MGP_129S1SvImJ_G0006112.1 mouse_genomes_project 3 1554445 1555709 + 1110015O18Rik lincRNA lincRNA MGP_129S1SvImJ_T0007447.1 MGP_129S1SvImJ_G0006112.1 mouse_genomes_project 3 1555595 1571799 + 1110015O18Rik lincRNA lincRNA MGP_129S1SvImJ_T0007448.1 MGP_129S1SvImJ_G0006112.1 mouse_genomes_project 3 1556380 1570863 + 1110015O18Rik lincRNA lincRNA MGP_129S1SvImJ_T0004366.1 MGP_129S1SvImJ_G0003818.1 mouse_genomes_project 3 110592536 110594607 + Gm43221 antisense antisense MGP_129S1SvImJ_T0062319.1 MGP_129S1SvImJ_G0027567.1 mouse_genomes_project 3 95803197 95816294 + MGP_129S1SvImJ_P0062319 Vps72 protein_coding protein_coding MGP_129S1SvImJ_T0062320.1 MGP_129S1SvImJ_G0027567.1 mouse_genomes_project 3 95803217 95811922 + Vps72 protein_coding processed_transcript MGP_129S1SvImJ_T0062321.1 MGP_129S1SvImJ_G0027567.1 mouse_genomes_project 3 95803248 95815964 + Vps72 protein_coding processed_transcript MGP_129S1SvImJ_T0062322.1 MGP_129S1SvImJ_G0027567.1 mouse_genomes_project 3 95806846 95812732 + Vps72 protein_coding processed_transcript MGP_129S1SvImJ_T0062323.1 MGP_129S1SvImJ_G0027567.1 mouse_genomes_project 3 95810325 95812851 + Vps72 protein_coding retained_intron MGP_129S1SvImJ_T0004228.1 MGP_129S1SvImJ_G0003727.1 mouse_genomes_project 3 28827041 28860973 + Gm15496 antisense antisense MGP_129S1SvImJ_T0004229.1 MGP_129S1SvImJ_G0003727.1 mouse_genomes_project 3 28855025 28859090 + Gm15496 antisense antisense MGP_129S1SvImJ_T0007592.1 MGP_129S1SvImJ_G0006216.1 mouse_genomes_project 3 79771127 79949541 + A330069K06Rik lincRNA lincRNA MGP_129S1SvImJ_T0098900.1 MGP_129S1SvImJ_G0036978.1 mouse_genomes_project 3 105382215 105383283 - 9530097N15Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0011570.1 MGP_129S1SvImJ_G0009686.1 mouse_genomes_project 3 123523138 123523406 + Gm26027 misc_RNA misc_RNA MGP_129S1SvImJ_T0010573.1 MGP_129S1SvImJ_G0008689.1 mouse_genomes_project 3 139780292 139780409 - Gm44327 miRNA miRNA MGP_129S1SvImJ_T0061469.1 MGP_129S1SvImJ_G0027366.1 mouse_genomes_project 3 87853024 87869312 - MGP_129S1SvImJ_P0061469 Lrrc71 protein_coding protein_coding MGP_129S1SvImJ_T0061470.1 MGP_129S1SvImJ_G0027366.1 mouse_genomes_project 3 87853996 87869314 - Lrrc71 protein_coding retained_intron MGP_129S1SvImJ_T0061471.1 MGP_129S1SvImJ_G0027366.1 mouse_genomes_project 3 87854047 87854674 - Lrrc71 protein_coding processed_transcript MGP_129S1SvImJ_T0061472.1 MGP_129S1SvImJ_G0027366.1 mouse_genomes_project 3 87855087 87859138 - MGP_129S1SvImJ_P0061472 Lrrc71 protein_coding protein_coding MGP_129S1SvImJ_T0061473.1 MGP_129S1SvImJ_G0027366.1 mouse_genomes_project 3 87855182 87869153 - MGP_129S1SvImJ_P0061473 Lrrc71 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0061474.1 MGP_129S1SvImJ_G0027366.1 mouse_genomes_project 3 87865973 87869283 - Lrrc71 protein_coding retained_intron MGP_129S1SvImJ_T0001341.1 MGP_129S1SvImJ_G0001265.1 mouse_genomes_project 3 129083178 129084983 + TEC TEC MGP_129S1SvImJ_T0007603.1 MGP_129S1SvImJ_G0006226.1 mouse_genomes_project 3 83396003 83417750 - 1700028M03Rik lincRNA lincRNA MGP_129S1SvImJ_T0013948.1 MGP_129S1SvImJ_G0012037.1 mouse_genomes_project 3 11484975 11485454 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061897.1 MGP_129S1SvImJ_G0027441.1 mouse_genomes_project 3 89652650 89666897 + MGP_129S1SvImJ_P0061897 Pbxip1 protein_coding protein_coding MGP_129S1SvImJ_T0061898.1 MGP_129S1SvImJ_G0027441.1 mouse_genomes_project 3 89652656 89661466 + Pbxip1 protein_coding processed_transcript MGP_129S1SvImJ_T0061899.1 MGP_129S1SvImJ_G0027441.1 mouse_genomes_project 3 89652659 89662105 + MGP_129S1SvImJ_P0061899 Pbxip1 protein_coding protein_coding MGP_129S1SvImJ_T0061900.1 MGP_129S1SvImJ_G0027441.1 mouse_genomes_project 3 89652698 89661414 + MGP_129S1SvImJ_P0061900 Pbxip1 protein_coding protein_coding MGP_129S1SvImJ_T0061901.1 MGP_129S1SvImJ_G0027441.1 mouse_genomes_project 3 89652700 89661458 + MGP_129S1SvImJ_P0061901 Pbxip1 protein_coding protein_coding MGP_129S1SvImJ_T0014295.1 MGP_129S1SvImJ_G0012384.1 mouse_genomes_project 3 123452027 123452799 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060730.1 MGP_129S1SvImJ_G0027194.1 mouse_genomes_project 3 49715707 49803173 - MGP_129S1SvImJ_P0060730 Elf2 protein_coding protein_coding MGP_129S1SvImJ_T0060731.1 MGP_129S1SvImJ_G0027194.1 mouse_genomes_project 3 49718226 49788498 - MGP_129S1SvImJ_P0060731 Elf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060732.1 MGP_129S1SvImJ_G0027194.1 mouse_genomes_project 3 49718227 49803154 - MGP_129S1SvImJ_P0060732 Elf2 protein_coding protein_coding MGP_129S1SvImJ_T0060733.1 MGP_129S1SvImJ_G0027194.1 mouse_genomes_project 3 49718659 49740566 - MGP_129S1SvImJ_P0060733 Elf2 protein_coding protein_coding MGP_129S1SvImJ_T0060734.1 MGP_129S1SvImJ_G0027194.1 mouse_genomes_project 3 49718661 49740726 - MGP_129S1SvImJ_P0060734 Elf2 protein_coding protein_coding MGP_129S1SvImJ_T0060735.1 MGP_129S1SvImJ_G0027194.1 mouse_genomes_project 3 49718661 49740665 - MGP_129S1SvImJ_P0060735 Elf2 protein_coding protein_coding MGP_129S1SvImJ_T0060736.1 MGP_129S1SvImJ_G0027194.1 mouse_genomes_project 3 49718681 49788456 - MGP_129S1SvImJ_P0060736 Elf2 protein_coding protein_coding MGP_129S1SvImJ_T0060737.1 MGP_129S1SvImJ_G0027194.1 mouse_genomes_project 3 49721679 49723235 - Elf2 protein_coding retained_intron MGP_129S1SvImJ_T0060738.1 MGP_129S1SvImJ_G0027194.1 mouse_genomes_project 3 49727840 49740519 - MGP_129S1SvImJ_P0060738 Elf2 protein_coding protein_coding MGP_129S1SvImJ_T0060739.1 MGP_129S1SvImJ_G0027194.1 mouse_genomes_project 3 49727840 49803168 - MGP_129S1SvImJ_P0060739 Elf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060740.1 MGP_129S1SvImJ_G0027194.1 mouse_genomes_project 3 49727856 49803071 - Elf2 protein_coding processed_transcript MGP_129S1SvImJ_T0060741.1 MGP_129S1SvImJ_G0027194.1 mouse_genomes_project 3 49727856 49740575 - MGP_129S1SvImJ_P0060741 Elf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060742.1 MGP_129S1SvImJ_G0027194.1 mouse_genomes_project 3 49728020 49740595 - MGP_129S1SvImJ_P0060742 Elf2 protein_coding protein_coding MGP_129S1SvImJ_T0014080.1 MGP_129S1SvImJ_G0012169.1 mouse_genomes_project 3 58339525 58344210 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098916.1 MGP_129S1SvImJ_G0036994.1 mouse_genomes_project 3 106297379 106298315 - Gm43846 sense_intronic sense_intronic MGP_129S1SvImJ_T0001168.1 MGP_129S1SvImJ_G0001094.1 mouse_genomes_project 3 33589774 33590332 + TEC TEC MGP_129S1SvImJ_T0004267.1 MGP_129S1SvImJ_G0003757.1 mouse_genomes_project 3 61305086 61308095 - 9330121J05Rik antisense antisense MGP_129S1SvImJ_T0014017.1 MGP_129S1SvImJ_G0012106.1 mouse_genomes_project 3 36089637 36089980 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014002.1 MGP_129S1SvImJ_G0012091.1 mouse_genomes_project 3 33729026 33729347 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061527.1 MGP_129S1SvImJ_G0027377.1 mouse_genomes_project 3 88105156 88107470 + Nes protein_coding retained_intron MGP_129S1SvImJ_T0061528.1 MGP_129S1SvImJ_G0027377.1 mouse_genomes_project 3 88105171 88114530 + MGP_129S1SvImJ_P0061528 Nes protein_coding protein_coding MGP_129S1SvImJ_T0061529.1 MGP_129S1SvImJ_G0027377.1 mouse_genomes_project 3 88105207 88114530 + MGP_129S1SvImJ_P0061529 Nes protein_coding protein_coding MGP_129S1SvImJ_T0063086.1 MGP_129S1SvImJ_G0027741.1 mouse_genomes_project 3 108658827 108673731 + MGP_129S1SvImJ_P0063086 Kcna10 protein_coding protein_coding MGP_129S1SvImJ_T0063087.1 MGP_129S1SvImJ_G0027741.1 mouse_genomes_project 3 108658915 108664241 + Kcna10 protein_coding processed_transcript MGP_129S1SvImJ_T0102498.1 MGP_129S1SvImJ_G0040332.1 mouse_genomes_project 3 99719914 99735527 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099736.1 MGP_129S1SvImJ_G0037803.1 mouse_genomes_project 3 56721290 56721390 - Gm24531 snRNA snRNA MGP_129S1SvImJ_T0060339.1 MGP_129S1SvImJ_G0027128.1 mouse_genomes_project 3 28362306 28387694 + Gpr160 protein_coding retained_intron MGP_129S1SvImJ_T0060340.1 MGP_129S1SvImJ_G0027128.1 mouse_genomes_project 3 28362306 28404057 + MGP_129S1SvImJ_P0060340 Gpr160 protein_coding protein_coding MGP_129S1SvImJ_T0060341.1 MGP_129S1SvImJ_G0027128.1 mouse_genomes_project 3 28362306 28404057 + MGP_129S1SvImJ_P0060341 Gpr160 protein_coding protein_coding MGP_129S1SvImJ_T0060342.1 MGP_129S1SvImJ_G0027128.1 mouse_genomes_project 3 28362306 28404059 + MGP_129S1SvImJ_P0060342 Gpr160 protein_coding protein_coding MGP_129S1SvImJ_T0060343.1 MGP_129S1SvImJ_G0027128.1 mouse_genomes_project 3 28362345 28404057 + MGP_129S1SvImJ_P0060343 Gpr160 protein_coding protein_coding MGP_129S1SvImJ_T0060344.1 MGP_129S1SvImJ_G0027128.1 mouse_genomes_project 3 28362349 28402659 + MGP_129S1SvImJ_P0060344 Gpr160 protein_coding protein_coding MGP_129S1SvImJ_T0060345.1 MGP_129S1SvImJ_G0027128.1 mouse_genomes_project 3 28362371 28404057 + MGP_129S1SvImJ_P0060345 Gpr160 protein_coding protein_coding MGP_129S1SvImJ_T0060346.1 MGP_129S1SvImJ_G0027128.1 mouse_genomes_project 3 28362499 28402688 + MGP_129S1SvImJ_P0060346 Gpr160 protein_coding protein_coding MGP_129S1SvImJ_T0099783.1 MGP_129S1SvImJ_G0037850.1 mouse_genomes_project 3 118347490 118347666 - Gm22361 snRNA snRNA MGP_129S1SvImJ_T0007668.1 MGP_129S1SvImJ_G0006274.1 mouse_genomes_project 3 109545104 109552075 - Gm12498 lincRNA lincRNA MGP_129S1SvImJ_T0001356.1 MGP_129S1SvImJ_G0001280.1 mouse_genomes_project 3 130233659 130235643 - TEC TEC MGP_129S1SvImJ_T0102474.1 MGP_129S1SvImJ_G0040308.1 mouse_genomes_project 3 90784781 90787171 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0007503.1 MGP_129S1SvImJ_G0006152.1 mouse_genomes_project 3 32243660 32250937 - Gm42695 lincRNA lincRNA MGP_129S1SvImJ_T0060106.1 MGP_129S1SvImJ_G0027079.1 mouse_genomes_project 3 12027527 12036788 + MGP_129S1SvImJ_P0060106 Car2 protein_coding protein_coding MGP_129S1SvImJ_T0060107.1 MGP_129S1SvImJ_G0027079.1 mouse_genomes_project 3 12027682 12042424 + MGP_129S1SvImJ_P0060107 Car2 protein_coding protein_coding MGP_129S1SvImJ_T0060108.1 MGP_129S1SvImJ_G0027079.1 mouse_genomes_project 3 12027893 12029821 + Car2 protein_coding retained_intron MGP_129S1SvImJ_T0063848.1 MGP_129S1SvImJ_G0027896.1 mouse_genomes_project 3 135876418 135896911 + MGP_129S1SvImJ_P0063848 Ints12 protein_coding protein_coding MGP_129S1SvImJ_T0063849.1 MGP_129S1SvImJ_G0027896.1 mouse_genomes_project 3 135876516 135886628 + Ints12 protein_coding retained_intron MGP_129S1SvImJ_T0063850.1 MGP_129S1SvImJ_G0027896.1 mouse_genomes_project 3 135884923 135893003 + Ints12 protein_coding processed_transcript MGP_129S1SvImJ_T0064386.1 MGP_129S1SvImJ_G0027994.1 mouse_genomes_project 3 156602947 156679767 + MGP_129S1SvImJ_P0064386 Pigk protein_coding protein_coding MGP_129S1SvImJ_T0064387.1 MGP_129S1SvImJ_G0027994.1 mouse_genomes_project 3 156602953 156631937 + Pigk protein_coding retained_intron MGP_129S1SvImJ_T0064388.1 MGP_129S1SvImJ_G0027994.1 mouse_genomes_project 3 156602960 156675954 + MGP_129S1SvImJ_P0064388 Pigk protein_coding protein_coding MGP_129S1SvImJ_T0064389.1 MGP_129S1SvImJ_G0027994.1 mouse_genomes_project 3 156602960 156730303 + MGP_129S1SvImJ_P0064389 Pigk protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064390.1 MGP_129S1SvImJ_G0027994.1 mouse_genomes_project 3 156602967 156879700 + MGP_129S1SvImJ_P0064390 Pigk protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064391.1 MGP_129S1SvImJ_G0027994.1 mouse_genomes_project 3 156602970 156675685 + MGP_129S1SvImJ_P0064391 Pigk protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064392.1 MGP_129S1SvImJ_G0027994.1 mouse_genomes_project 3 156628806 156630961 + Pigk protein_coding processed_transcript MGP_129S1SvImJ_T0064393.1 MGP_129S1SvImJ_G0027994.1 mouse_genomes_project 3 156629025 156675880 + MGP_129S1SvImJ_P0064393 Pigk protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064394.1 MGP_129S1SvImJ_G0027994.1 mouse_genomes_project 3 156654024 156657205 + Pigk protein_coding processed_transcript MGP_129S1SvImJ_T0007631.1 MGP_129S1SvImJ_G0006242.1 mouse_genomes_project 3 95290042 95291382 + lincRNA lincRNA MGP_129S1SvImJ_T0099766.1 MGP_129S1SvImJ_G0037833.1 mouse_genomes_project 3 90890814 90890961 - Gm23464 snRNA snRNA MGP_129S1SvImJ_T0098918.1 MGP_129S1SvImJ_G0036996.1 mouse_genomes_project 3 107109050 107110484 - Gm43328 sense_intronic sense_intronic MGP_129S1SvImJ_T0013918.1 MGP_129S1SvImJ_G0012007.1 mouse_genomes_project 3 3542937 3543283 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062708.1 MGP_129S1SvImJ_G0027655.1 mouse_genomes_project 3 99448058 99460927 - MGP_129S1SvImJ_P0062708 protein_coding protein_coding MGP_129S1SvImJ_T0099779.1 MGP_129S1SvImJ_G0037846.1 mouse_genomes_project 3 106018102 106018192 + Gm24223 snRNA snRNA MGP_129S1SvImJ_T0063995.1 MGP_129S1SvImJ_G0027923.1 mouse_genomes_project 3 141108888 141125324 + MGP_129S1SvImJ_P0063995 1110002E22Rik protein_coding protein_coding MGP_129S1SvImJ_T0063996.1 MGP_129S1SvImJ_G0027923.1 mouse_genomes_project 3 141115440 141121191 + 1110002E22Rik protein_coding processed_transcript MGP_129S1SvImJ_T0099789.1 MGP_129S1SvImJ_G0037856.1 mouse_genomes_project 3 134653550 134653645 + Gm26103 snRNA snRNA MGP_129S1SvImJ_T0062180.1 MGP_129S1SvImJ_G0027541.1 mouse_genomes_project 3 94262675 94356576 + MGP_129S1SvImJ_P0062180 protein_coding protein_coding MGP_129S1SvImJ_T0014201.1 MGP_129S1SvImJ_G0012290.1 mouse_genomes_project 3 96137063 96137922 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099759.1 MGP_129S1SvImJ_G0037826.1 mouse_genomes_project 3 89027605 89027767 + Gm23054 snRNA snRNA MGP_129S1SvImJ_T0007464.1 MGP_129S1SvImJ_G0006124.1 mouse_genomes_project 3 10527328 10528466 + lincRNA lincRNA MGP_129S1SvImJ_T0007465.1 MGP_129S1SvImJ_G0006124.1 mouse_genomes_project 3 10527355 10528467 + lincRNA lincRNA MGP_129S1SvImJ_T0007466.1 MGP_129S1SvImJ_G0006124.1 mouse_genomes_project 3 10527401 10528254 + lincRNA lincRNA MGP_129S1SvImJ_T0007468.1 MGP_129S1SvImJ_G0006124.1 mouse_genomes_project 3 10527579 10530270 + lincRNA lincRNA MGP_129S1SvImJ_T0007501.1 MGP_129S1SvImJ_G0006150.1 mouse_genomes_project 3 32099251 32106976 - Gm20515 lincRNA lincRNA MGP_129S1SvImJ_T0004433.1 MGP_129S1SvImJ_G0003868.1 mouse_genomes_project 3 162225168 162239805 - B230334C09Rik antisense antisense MGP_129S1SvImJ_T0004403.1 MGP_129S1SvImJ_G0003846.1 mouse_genomes_project 3 140899912 140902115 - Gm43087 antisense antisense MGP_129S1SvImJ_T0014056.1 MGP_129S1SvImJ_G0012145.1 mouse_genomes_project 3 50759532 50760284 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001195.1 MGP_129S1SvImJ_G0001121.1 mouse_genomes_project 3 46395213 46395322 + TEC TEC MGP_129S1SvImJ_T0101013.1 MGP_129S1SvImJ_G0039080.1 mouse_genomes_project 3 25229129 25229290 + Gm26040 snoRNA snoRNA MGP_129S1SvImJ_T0061060.1 MGP_129S1SvImJ_G0027264.1 mouse_genomes_project 3 62982963 63011252 - MGP_129S1SvImJ_P0061060 Slc33a1 protein_coding protein_coding MGP_129S1SvImJ_T0061061.1 MGP_129S1SvImJ_G0027264.1 mouse_genomes_project 3 62988861 63011354 - MGP_129S1SvImJ_P0061061 Slc33a1 protein_coding protein_coding MGP_129S1SvImJ_T0061062.1 MGP_129S1SvImJ_G0027264.1 mouse_genomes_project 3 62988945 63010958 - MGP_129S1SvImJ_P0061062 Slc33a1 protein_coding protein_coding MGP_129S1SvImJ_T0061818.1 MGP_129S1SvImJ_G0027424.1 mouse_genomes_project 3 89432447 89436772 + MGP_129S1SvImJ_P0061818 Muc1 protein_coding protein_coding MGP_129S1SvImJ_T0061819.1 MGP_129S1SvImJ_G0027424.1 mouse_genomes_project 3 89434629 89435473 + Muc1 protein_coding processed_transcript MGP_129S1SvImJ_T0061820.1 MGP_129S1SvImJ_G0027424.1 mouse_genomes_project 3 89434861 89436588 + Muc1 protein_coding processed_transcript MGP_129S1SvImJ_T0013972.1 MGP_129S1SvImJ_G0012061.1 mouse_genomes_project 3 18030387 18031999 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007702.1 MGP_129S1SvImJ_G0006300.1 mouse_genomes_project 3 130500410 130502558 + Gm43053 lincRNA lincRNA MGP_129S1SvImJ_T0001133.1 MGP_129S1SvImJ_G0001059.1 mouse_genomes_project 3 7640952 7642739 + TEC TEC MGP_129S1SvImJ_T0014360.1 MGP_129S1SvImJ_G0012449.1 mouse_genomes_project 3 143282454 143284094 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101043.1 MGP_129S1SvImJ_G0039110.1 mouse_genomes_project 3 87688728 87688848 - Gm25167 snoRNA snoRNA MGP_129S1SvImJ_T0064443.1 MGP_129S1SvImJ_G0028003.1 mouse_genomes_project 3 158599365 158611055 - Tyw3 protein_coding processed_transcript MGP_129S1SvImJ_T0064444.1 MGP_129S1SvImJ_G0028003.1 mouse_genomes_project 3 158599598 158613588 - MGP_129S1SvImJ_P0064444 Tyw3 protein_coding protein_coding MGP_129S1SvImJ_T0064445.1 MGP_129S1SvImJ_G0028003.1 mouse_genomes_project 3 158604075 158613625 - MGP_129S1SvImJ_P0064445 Tyw3 protein_coding protein_coding MGP_129S1SvImJ_T0101060.1 MGP_129S1SvImJ_G0039127.1 mouse_genomes_project 3 117235498 117235630 + Gm22337 snoRNA snoRNA MGP_129S1SvImJ_T0014167.1 MGP_129S1SvImJ_G0012256.1 mouse_genomes_project 3 87015013 87015309 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062304.1 MGP_129S1SvImJ_G0027565.1 mouse_genomes_project 3 95713069 95725526 - MGP_129S1SvImJ_P0062304 Psmd4 protein_coding protein_coding MGP_129S1SvImJ_T0062305.1 MGP_129S1SvImJ_G0027565.1 mouse_genomes_project 3 95713072 95725464 - MGP_129S1SvImJ_P0062305 Psmd4 protein_coding protein_coding MGP_129S1SvImJ_T0062306.1 MGP_129S1SvImJ_G0027565.1 mouse_genomes_project 3 95713079 95715644 - MGP_129S1SvImJ_P0062306 Psmd4 protein_coding protein_coding MGP_129S1SvImJ_T0062307.1 MGP_129S1SvImJ_G0027565.1 mouse_genomes_project 3 95713080 95725460 - Psmd4 protein_coding retained_intron MGP_129S1SvImJ_T0062308.1 MGP_129S1SvImJ_G0027565.1 mouse_genomes_project 3 95713080 95725455 - MGP_129S1SvImJ_P0062308 Psmd4 protein_coding protein_coding MGP_129S1SvImJ_T0062309.1 MGP_129S1SvImJ_G0027565.1 mouse_genomes_project 3 95713298 95725457 - Psmd4 protein_coding retained_intron MGP_129S1SvImJ_T0062310.1 MGP_129S1SvImJ_G0027565.1 mouse_genomes_project 3 95713303 95714293 - Psmd4 protein_coding retained_intron MGP_129S1SvImJ_T0062311.1 MGP_129S1SvImJ_G0027565.1 mouse_genomes_project 3 95716199 95725462 - Psmd4 protein_coding processed_transcript MGP_129S1SvImJ_T0063186.1 MGP_129S1SvImJ_G0027769.1 mouse_genomes_project 3 109734810 109739958 - MGP_129S1SvImJ_P0063186 Cyb561d1 protein_coding protein_coding MGP_129S1SvImJ_T0063187.1 MGP_129S1SvImJ_G0027769.1 mouse_genomes_project 3 109734894 109740336 - Cyb561d1 protein_coding processed_transcript MGP_129S1SvImJ_T0063188.1 MGP_129S1SvImJ_G0027769.1 mouse_genomes_project 3 109734894 109739958 - MGP_129S1SvImJ_P0063188 Cyb561d1 protein_coding protein_coding MGP_129S1SvImJ_T0063189.1 MGP_129S1SvImJ_G0027769.1 mouse_genomes_project 3 109737396 109739719 - MGP_129S1SvImJ_P0063189 Cyb561d1 protein_coding protein_coding MGP_129S1SvImJ_T0007755.1 MGP_129S1SvImJ_G0006347.1 mouse_genomes_project 3 147031903 147033813 + Gm42706 lincRNA lincRNA MGP_129S1SvImJ_T0001174.1 MGP_129S1SvImJ_G0001100.1 mouse_genomes_project 3 35344688 35352008 + TEC TEC MGP_129S1SvImJ_T0001217.1 MGP_129S1SvImJ_G0001142.1 mouse_genomes_project 3 50363659 50364853 - TEC TEC MGP_129S1SvImJ_T0014230.1 MGP_129S1SvImJ_G0012319.1 mouse_genomes_project 3 102478971 102479408 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0059996.1 MGP_129S1SvImJ_G0027045.1 mouse_genomes_project 3 1976126 2184371 + MGP_129S1SvImJ_P0059996 Zfhx4 protein_coding protein_coding MGP_129S1SvImJ_T0059997.1 MGP_129S1SvImJ_G0027045.1 mouse_genomes_project 3 1976146 2099605 + Zfhx4 protein_coding retained_intron MGP_129S1SvImJ_T0059998.1 MGP_129S1SvImJ_G0027045.1 mouse_genomes_project 3 1976154 2187061 + MGP_129S1SvImJ_P0059998 Zfhx4 protein_coding protein_coding MGP_129S1SvImJ_T0059999.1 MGP_129S1SvImJ_G0027045.1 mouse_genomes_project 3 1979893 2000406 + MGP_129S1SvImJ_P0059999 Zfhx4 protein_coding protein_coding MGP_129S1SvImJ_T0060000.1 MGP_129S1SvImJ_G0027045.1 mouse_genomes_project 3 2000059 2187063 + MGP_129S1SvImJ_P0060000 Zfhx4 protein_coding protein_coding MGP_129S1SvImJ_T0014396.1 MGP_129S1SvImJ_G0012485.1 mouse_genomes_project 3 163145696 163146693 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011572.1 MGP_129S1SvImJ_G0009688.1 mouse_genomes_project 3 128551062 128551330 - Gm26275 misc_RNA misc_RNA MGP_129S1SvImJ_T0014264.1 MGP_129S1SvImJ_G0012353.1 mouse_genomes_project 3 112179834 112180168 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014138.1 MGP_129S1SvImJ_G0012227.1 mouse_genomes_project 3 74873062 74874364 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064030.1 MGP_129S1SvImJ_G0027932.1 mouse_genomes_project 3 141509927 141540441 - MGP_129S1SvImJ_P0064030 Metap1 protein_coding protein_coding MGP_129S1SvImJ_T0064031.1 MGP_129S1SvImJ_G0027932.1 mouse_genomes_project 3 141510652 141519898 - MGP_129S1SvImJ_P0064031 Metap1 protein_coding protein_coding MGP_129S1SvImJ_T0064032.1 MGP_129S1SvImJ_G0027932.1 mouse_genomes_project 3 141517219 141526131 - Metap1 protein_coding retained_intron MGP_129S1SvImJ_T0064033.1 MGP_129S1SvImJ_G0027932.1 mouse_genomes_project 3 141517280 141526220 - Metap1 protein_coding retained_intron MGP_129S1SvImJ_T0064034.1 MGP_129S1SvImJ_G0027932.1 mouse_genomes_project 3 141519896 141532614 - Metap1 protein_coding processed_transcript MGP_129S1SvImJ_T0064035.1 MGP_129S1SvImJ_G0027932.1 mouse_genomes_project 3 141526475 141540325 - MGP_129S1SvImJ_P0064035 Metap1 protein_coding protein_coding MGP_129S1SvImJ_T0064036.1 MGP_129S1SvImJ_G0027932.1 mouse_genomes_project 3 141531085 141540295 - Metap1 protein_coding retained_intron MGP_129S1SvImJ_T0101042.1 MGP_129S1SvImJ_G0039109.1 mouse_genomes_project 3 87142670 87142802 + Gm24472 snoRNA snoRNA MGP_129S1SvImJ_T0018051.1 MGP_129S1SvImJ_G0015528.1 mouse_genomes_project 3 151724479 151739603 + Gm43574 processed_transcript processed_transcript MGP_129S1SvImJ_T0014234.1 MGP_129S1SvImJ_G0012323.1 mouse_genomes_project 3 103918863 103919602 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060038.1 MGP_129S1SvImJ_G0027057.1 mouse_genomes_project 3 6313772 6521739 - MGP_129S1SvImJ_P0060038 Zfp704 protein_coding protein_coding MGP_129S1SvImJ_T0060039.1 MGP_129S1SvImJ_G0027057.1 mouse_genomes_project 3 6325044 6454748 - MGP_129S1SvImJ_P0060039 Zfp704 protein_coding protein_coding MGP_129S1SvImJ_T0060040.1 MGP_129S1SvImJ_G0027057.1 mouse_genomes_project 3 6325448 6327789 - Zfp704 protein_coding retained_intron MGP_129S1SvImJ_T0062429.1 MGP_129S1SvImJ_G0027587.1 mouse_genomes_project 3 96313120 96342121 + MGP_129S1SvImJ_P0062429 Hormad1 protein_coding protein_coding MGP_129S1SvImJ_T0062430.1 MGP_129S1SvImJ_G0027587.1 mouse_genomes_project 3 96313121 96342121 + MGP_129S1SvImJ_P0062430 Hormad1 protein_coding protein_coding MGP_129S1SvImJ_T0062431.1 MGP_129S1SvImJ_G0027587.1 mouse_genomes_project 3 96313121 96340328 + MGP_129S1SvImJ_P0062431 Hormad1 protein_coding protein_coding MGP_129S1SvImJ_T0062432.1 MGP_129S1SvImJ_G0027587.1 mouse_genomes_project 3 96313121 96342121 + MGP_129S1SvImJ_P0062432 Hormad1 protein_coding protein_coding MGP_129S1SvImJ_T0007462.1 MGP_129S1SvImJ_G0006122.1 mouse_genomes_project 3 8815496 8837285 - Gm10745 lincRNA lincRNA MGP_129S1SvImJ_T0062775.1 MGP_129S1SvImJ_G0027676.1 mouse_genomes_project 3 102758982 102787471 - MGP_129S1SvImJ_P0062775 Atp1a1 protein_coding protein_coding MGP_129S1SvImJ_T0062776.1 MGP_129S1SvImJ_G0027676.1 mouse_genomes_project 3 102759079 102760324 - Atp1a1 protein_coding retained_intron MGP_129S1SvImJ_T0062777.1 MGP_129S1SvImJ_G0027676.1 mouse_genomes_project 3 102768551 102771803 - Atp1a1 protein_coding retained_intron MGP_129S1SvImJ_T0007670.1 MGP_129S1SvImJ_G0006276.1 mouse_genomes_project 3 109765902 109779355 + Gm42754 lincRNA lincRNA MGP_129S1SvImJ_T0014390.1 MGP_129S1SvImJ_G0012479.1 mouse_genomes_project 3 158125838 158126176 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098872.1 MGP_129S1SvImJ_G0036950.1 mouse_genomes_project 3 94986751 94991637 + Gm42463 sense_intronic sense_intronic MGP_129S1SvImJ_T0062574.1 MGP_129S1SvImJ_G0027621.1 mouse_genomes_project 3 97456798 97461149 - MGP_129S1SvImJ_P0062574 Polr3gl protein_coding protein_coding MGP_129S1SvImJ_T0062575.1 MGP_129S1SvImJ_G0027621.1 mouse_genomes_project 3 97457331 97460613 - Polr3gl protein_coding retained_intron MGP_129S1SvImJ_T0062576.1 MGP_129S1SvImJ_G0027621.1 mouse_genomes_project 3 97457339 97459094 - Polr3gl protein_coding retained_intron MGP_129S1SvImJ_T0061500.1 MGP_129S1SvImJ_G0027371.1 mouse_genomes_project 3 87985609 88014064 - MGP_129S1SvImJ_P0061500 Prcc protein_coding protein_coding MGP_129S1SvImJ_T0061311.1 MGP_129S1SvImJ_G0027325.1 mouse_genomes_project 3 81827682 81871330 - MGP_129S1SvImJ_P0061311 Gucy1b3 protein_coding protein_coding MGP_129S1SvImJ_T0061312.1 MGP_129S1SvImJ_G0027325.1 mouse_genomes_project 3 81829996 81831008 - Gucy1b3 protein_coding retained_intron MGP_129S1SvImJ_T0061313.1 MGP_129S1SvImJ_G0027325.1 mouse_genomes_project 3 81846708 81871429 - Gucy1b3 protein_coding processed_transcript MGP_129S1SvImJ_T0062525.1 MGP_129S1SvImJ_G0027602.1 mouse_genomes_project 3 96782344 96790685 - MGP_129S1SvImJ_P0062525 Plekho1 protein_coding protein_coding MGP_129S1SvImJ_T0062526.1 MGP_129S1SvImJ_G0027602.1 mouse_genomes_project 3 96782362 96795011 - MGP_129S1SvImJ_P0062526 Plekho1 protein_coding protein_coding MGP_129S1SvImJ_T0062527.1 MGP_129S1SvImJ_G0027602.1 mouse_genomes_project 3 96782915 96790739 - MGP_129S1SvImJ_P0062527 Plekho1 protein_coding protein_coding MGP_129S1SvImJ_T0062528.1 MGP_129S1SvImJ_G0027602.1 mouse_genomes_project 3 96790351 96790685 - Plekho1 protein_coding retained_intron MGP_129S1SvImJ_T0060648.1 MGP_129S1SvImJ_G0027182.1 mouse_genomes_project 3 38823028 38932737 + MGP_129S1SvImJ_P0060648 Abhd18 protein_coding protein_coding MGP_129S1SvImJ_T0060650.1 MGP_129S1SvImJ_G0027182.1 mouse_genomes_project 3 38873483 38934568 + MGP_129S1SvImJ_P0060650 Abhd18 protein_coding protein_coding MGP_129S1SvImJ_T0060651.1 MGP_129S1SvImJ_G0027182.1 mouse_genomes_project 3 38873615 38934566 + MGP_129S1SvImJ_P0060651 Abhd18 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060652.1 MGP_129S1SvImJ_G0027182.1 mouse_genomes_project 3 38873644 38906365 + MGP_129S1SvImJ_P0060652 Abhd18 protein_coding protein_coding MGP_129S1SvImJ_T0060653.1 MGP_129S1SvImJ_G0027182.1 mouse_genomes_project 3 38873660 38933567 + MGP_129S1SvImJ_P0060653 Abhd18 protein_coding protein_coding MGP_129S1SvImJ_T0060654.1 MGP_129S1SvImJ_G0027182.1 mouse_genomes_project 3 38873662 38933584 + MGP_129S1SvImJ_P0060654 Abhd18 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060656.1 MGP_129S1SvImJ_G0027182.1 mouse_genomes_project 3 38926974 38933125 + Abhd18 protein_coding processed_transcript MGP_129S1SvImJ_T0014160.1 MGP_129S1SvImJ_G0012249.1 mouse_genomes_project 3 84475637 84476628 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101024.1 MGP_129S1SvImJ_G0039091.1 mouse_genomes_project 3 52112038 52112163 + Gm23675 snoRNA snoRNA MGP_129S1SvImJ_T0001414.1 MGP_129S1SvImJ_G0001337.1 mouse_genomes_project 3 161182121 161183686 + TEC TEC MGP_129S1SvImJ_T0061751.1 MGP_129S1SvImJ_G0027417.1 mouse_genomes_project 3 89336474 89355338 - MGP_129S1SvImJ_P0061751 Hcn3 protein_coding protein_coding MGP_129S1SvImJ_T0061752.1 MGP_129S1SvImJ_G0027417.1 mouse_genomes_project 3 89340104 89342605 - Hcn3 protein_coding retained_intron MGP_129S1SvImJ_T0061753.1 MGP_129S1SvImJ_G0027417.1 mouse_genomes_project 3 89340221 89342587 - Hcn3 protein_coding retained_intron MGP_129S1SvImJ_T0061754.1 MGP_129S1SvImJ_G0027417.1 mouse_genomes_project 3 89342853 89355122 - Hcn3 protein_coding processed_transcript MGP_129S1SvImJ_T0063978.1 MGP_129S1SvImJ_G0027919.1 mouse_genomes_project 3 140948673 140958410 + MGP_129S1SvImJ_P0063978 Lamtor3 protein_coding protein_coding MGP_129S1SvImJ_T0063979.1 MGP_129S1SvImJ_G0027919.1 mouse_genomes_project 3 140948693 140949682 + Lamtor3 protein_coding retained_intron MGP_129S1SvImJ_T0063980.1 MGP_129S1SvImJ_G0027919.1 mouse_genomes_project 3 140948693 140958952 + MGP_129S1SvImJ_P0063980 Lamtor3 protein_coding protein_coding MGP_129S1SvImJ_T0063981.1 MGP_129S1SvImJ_G0027919.1 mouse_genomes_project 3 140948729 140958431 + Lamtor3 protein_coding processed_transcript MGP_129S1SvImJ_T0063982.1 MGP_129S1SvImJ_G0027919.1 mouse_genomes_project 3 140948739 140957007 + MGP_129S1SvImJ_P0063982 Lamtor3 protein_coding protein_coding MGP_129S1SvImJ_T0063983.1 MGP_129S1SvImJ_G0027919.1 mouse_genomes_project 3 140949011 140957292 + Lamtor3 protein_coding retained_intron MGP_129S1SvImJ_T0063984.1 MGP_129S1SvImJ_G0027919.1 mouse_genomes_project 3 140954989 140958346 + Lamtor3 protein_coding retained_intron MGP_129S1SvImJ_T0063985.1 MGP_129S1SvImJ_G0027919.1 mouse_genomes_project 3 140956369 140959087 + Lamtor3 protein_coding retained_intron MGP_129S1SvImJ_T0062556.1 MGP_129S1SvImJ_G0027610.1 mouse_genomes_project 3 97027159 97027679 - MGP_129S1SvImJ_P0062556 Hist2h2ac protein_coding protein_coding MGP_129S1SvImJ_T0062132.1 MGP_129S1SvImJ_G0027504.1 mouse_genomes_project 3 93054231 93057006 - MGP_129S1SvImJ_P0062132 2210017I01Rik protein_coding protein_coding MGP_129S1SvImJ_T0061992.1 MGP_129S1SvImJ_G0027455.1 mouse_genomes_project 3 90499933 90501032 - MGP_129S1SvImJ_P0061992 protein_coding protein_coding MGP_129S1SvImJ_T0061993.1 MGP_129S1SvImJ_G0027455.1 mouse_genomes_project 3 90500074 90501346 - MGP_129S1SvImJ_P0061993 protein_coding protein_coding MGP_129S1SvImJ_T0061994.1 MGP_129S1SvImJ_G0027455.1 mouse_genomes_project 3 90500078 90501364 - protein_coding retained_intron MGP_129S1SvImJ_T0061995.1 MGP_129S1SvImJ_G0027455.1 mouse_genomes_project 3 90500078 90501365 - protein_coding retained_intron MGP_129S1SvImJ_T0061996.1 MGP_129S1SvImJ_G0027455.1 mouse_genomes_project 3 90500082 90501354 - protein_coding retained_intron MGP_129S1SvImJ_T0061997.1 MGP_129S1SvImJ_G0027455.1 mouse_genomes_project 3 90500082 90501379 - MGP_129S1SvImJ_P0061997 protein_coding protein_coding MGP_129S1SvImJ_T0061998.1 MGP_129S1SvImJ_G0027455.1 mouse_genomes_project 3 90500082 90501382 - MGP_129S1SvImJ_P0061998 protein_coding protein_coding MGP_129S1SvImJ_T0061999.1 MGP_129S1SvImJ_G0027455.1 mouse_genomes_project 3 90500238 90501377 - protein_coding retained_intron MGP_129S1SvImJ_T0062000.1 MGP_129S1SvImJ_G0027455.1 mouse_genomes_project 3 90500789 90501376 - protein_coding retained_intron MGP_129S1SvImJ_T0014387.1 MGP_129S1SvImJ_G0012476.1 mouse_genomes_project 3 156766615 156766782 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060996.1 MGP_129S1SvImJ_G0027253.1 mouse_genomes_project 3 58965212 58970862 + MGP_129S1SvImJ_P0060996 Sucnr1 protein_coding protein_coding MGP_129S1SvImJ_T0060997.1 MGP_129S1SvImJ_G0027253.1 mouse_genomes_project 3 58965245 58969621 + Sucnr1 protein_coding processed_transcript MGP_129S1SvImJ_T0061105.1 MGP_129S1SvImJ_G0027277.1 mouse_genomes_project 3 66112864 66122419 - MGP_129S1SvImJ_P0061105 Shox2 protein_coding protein_coding MGP_129S1SvImJ_T0061106.1 MGP_129S1SvImJ_G0027277.1 mouse_genomes_project 3 66112873 66122475 - MGP_129S1SvImJ_P0061106 Shox2 protein_coding protein_coding MGP_129S1SvImJ_T0061107.1 MGP_129S1SvImJ_G0027277.1 mouse_genomes_project 3 66112928 66122928 - MGP_129S1SvImJ_P0061107 Shox2 protein_coding protein_coding MGP_129S1SvImJ_T0061108.1 MGP_129S1SvImJ_G0027277.1 mouse_genomes_project 3 66115044 66119968 - MGP_129S1SvImJ_P0061108 Shox2 protein_coding protein_coding MGP_129S1SvImJ_T0014376.1 MGP_129S1SvImJ_G0012465.1 mouse_genomes_project 3 150089159 150089551 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001295.1 MGP_129S1SvImJ_G0001219.1 mouse_genomes_project 3 99013140 99018259 + TEC TEC MGP_129S1SvImJ_T0064146.1 MGP_129S1SvImJ_G0027955.1 mouse_genomes_project 3 148228647 148249947 - MGP_129S1SvImJ_P0064146 protein_coding protein_coding MGP_129S1SvImJ_T0061319.1 MGP_129S1SvImJ_G0027327.1 mouse_genomes_project 3 82163247 82190508 + MGP_129S1SvImJ_P0061319 Map9 protein_coding protein_coding MGP_129S1SvImJ_T0061320.1 MGP_129S1SvImJ_G0027327.1 mouse_genomes_project 3 82163275 82186046 + MGP_129S1SvImJ_P0061320 Map9 protein_coding protein_coding MGP_129S1SvImJ_T0061321.1 MGP_129S1SvImJ_G0027327.1 mouse_genomes_project 3 82163275 82203429 + MGP_129S1SvImJ_P0061321 Map9 protein_coding protein_coding MGP_129S1SvImJ_T0061322.1 MGP_129S1SvImJ_G0027327.1 mouse_genomes_project 3 82163373 82190444 + MGP_129S1SvImJ_P0061322 Map9 protein_coding protein_coding MGP_129S1SvImJ_T0061323.1 MGP_129S1SvImJ_G0027327.1 mouse_genomes_project 3 82163390 82203429 + MGP_129S1SvImJ_P0061323 Map9 protein_coding protein_coding MGP_129S1SvImJ_T0061324.1 MGP_129S1SvImJ_G0027327.1 mouse_genomes_project 3 82186797 82188852 + Map9 protein_coding retained_intron MGP_129S1SvImJ_T0061325.1 MGP_129S1SvImJ_G0027327.1 mouse_genomes_project 3 82187158 82190226 + MGP_129S1SvImJ_P0061325 Map9 protein_coding protein_coding MGP_129S1SvImJ_T0007645.1 MGP_129S1SvImJ_G0006256.1 mouse_genomes_project 3 101605945 101640068 + Gm12474 lincRNA lincRNA MGP_129S1SvImJ_T0014273.1 MGP_129S1SvImJ_G0012362.1 mouse_genomes_project 3 114804580 114804977 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014397.1 MGP_129S1SvImJ_G0012486.1 mouse_genomes_project 3 163649593 163649815 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007727.1 MGP_129S1SvImJ_G0006322.1 mouse_genomes_project 3 139929546 139932846 - Gm43357 lincRNA lincRNA MGP_129S1SvImJ_T0014115.1 MGP_129S1SvImJ_G0012204.1 mouse_genomes_project 3 67536725 67537306 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062272.1 MGP_129S1SvImJ_G0027562.1 mouse_genomes_project 3 95629689 95635711 + MGP_129S1SvImJ_P0062272 Rfx5 protein_coding protein_coding MGP_129S1SvImJ_T0062273.1 MGP_129S1SvImJ_G0027562.1 mouse_genomes_project 3 95629722 95632744 + MGP_129S1SvImJ_P0062273 Rfx5 protein_coding protein_coding MGP_129S1SvImJ_T0062274.1 MGP_129S1SvImJ_G0027562.1 mouse_genomes_project 3 95629722 95637776 + MGP_129S1SvImJ_P0062274 Rfx5 protein_coding protein_coding MGP_129S1SvImJ_T0062275.1 MGP_129S1SvImJ_G0027562.1 mouse_genomes_project 3 95629723 95632528 + MGP_129S1SvImJ_P0062275 Rfx5 protein_coding protein_coding MGP_129S1SvImJ_T0062276.1 MGP_129S1SvImJ_G0027562.1 mouse_genomes_project 3 95629749 95637564 + MGP_129S1SvImJ_P0062276 Rfx5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062277.1 MGP_129S1SvImJ_G0027562.1 mouse_genomes_project 3 95629774 95631918 + Rfx5 protein_coding processed_transcript MGP_129S1SvImJ_T0062278.1 MGP_129S1SvImJ_G0027562.1 mouse_genomes_project 3 95629774 95633363 + MGP_129S1SvImJ_P0062278 Rfx5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062279.1 MGP_129S1SvImJ_G0027562.1 mouse_genomes_project 3 95629784 95637564 + MGP_129S1SvImJ_P0062279 Rfx5 protein_coding protein_coding MGP_129S1SvImJ_T0062280.1 MGP_129S1SvImJ_G0027562.1 mouse_genomes_project 3 95629809 95632606 + MGP_129S1SvImJ_P0062280 Rfx5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062281.1 MGP_129S1SvImJ_G0027562.1 mouse_genomes_project 3 95629815 95637561 + Rfx5 protein_coding retained_intron MGP_129S1SvImJ_T0062282.1 MGP_129S1SvImJ_G0027562.1 mouse_genomes_project 3 95629840 95637564 + MGP_129S1SvImJ_P0062282 Rfx5 protein_coding protein_coding MGP_129S1SvImJ_T0062283.1 MGP_129S1SvImJ_G0027562.1 mouse_genomes_project 3 95629998 95633010 + MGP_129S1SvImJ_P0062283 Rfx5 protein_coding protein_coding MGP_129S1SvImJ_T0062284.1 MGP_129S1SvImJ_G0027562.1 mouse_genomes_project 3 95630092 95632542 + MGP_129S1SvImJ_P0062284 Rfx5 protein_coding protein_coding MGP_129S1SvImJ_T0062285.1 MGP_129S1SvImJ_G0027562.1 mouse_genomes_project 3 95630141 95632573 + MGP_129S1SvImJ_P0062285 Rfx5 protein_coding protein_coding MGP_129S1SvImJ_T0062286.1 MGP_129S1SvImJ_G0027562.1 mouse_genomes_project 3 95630977 95635821 + MGP_129S1SvImJ_P0062286 Rfx5 protein_coding protein_coding MGP_129S1SvImJ_T0062287.1 MGP_129S1SvImJ_G0027562.1 mouse_genomes_project 3 95631229 95637776 + MGP_129S1SvImJ_P0062287 Rfx5 protein_coding protein_coding MGP_129S1SvImJ_T0062288.1 MGP_129S1SvImJ_G0027562.1 mouse_genomes_project 3 95631685 95633017 + Rfx5 protein_coding retained_intron MGP_129S1SvImJ_T0001334.1 MGP_129S1SvImJ_G0001258.1 mouse_genomes_project 3 126735543 126735789 - TEC TEC MGP_129S1SvImJ_T0062613.1 MGP_129S1SvImJ_G0027631.1 mouse_genomes_project 3 97603518 97620555 - MGP_129S1SvImJ_P0062613 Polr3c protein_coding protein_coding MGP_129S1SvImJ_T0062614.1 MGP_129S1SvImJ_G0027631.1 mouse_genomes_project 3 97603551 97620368 - MGP_129S1SvImJ_P0062614 Polr3c protein_coding protein_coding MGP_129S1SvImJ_T0062615.1 MGP_129S1SvImJ_G0027631.1 mouse_genomes_project 3 97608485 97616930 - MGP_129S1SvImJ_P0062615 Polr3c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062616.1 MGP_129S1SvImJ_G0027631.1 mouse_genomes_project 3 97611832 97620403 - Polr3c protein_coding retained_intron MGP_129S1SvImJ_T0062617.1 MGP_129S1SvImJ_G0027631.1 mouse_genomes_project 3 97616530 97620381 - MGP_129S1SvImJ_P0062617 Polr3c protein_coding protein_coding MGP_129S1SvImJ_T0062618.1 MGP_129S1SvImJ_G0027631.1 mouse_genomes_project 3 97616533 97620402 - MGP_129S1SvImJ_P0062618 Polr3c protein_coding protein_coding MGP_129S1SvImJ_T0001411.1 MGP_129S1SvImJ_G0001334.1 mouse_genomes_project 3 160814028 160818773 + TEC TEC MGP_129S1SvImJ_T0011556.1 MGP_129S1SvImJ_G0009672.1 mouse_genomes_project 3 32318454 32318726 + Mir1897 misc_RNA misc_RNA MGP_129S1SvImJ_T0004272.1 MGP_129S1SvImJ_G0003760.1 mouse_genomes_project 3 64436359 64460864 - A730090N16Rik antisense antisense MGP_129S1SvImJ_T0062177.1 MGP_129S1SvImJ_G0027538.1 mouse_genomes_project 3 94262668 94306187 + MGP_129S1SvImJ_P0062177 protein_coding protein_coding MGP_129S1SvImJ_T0101051.1 MGP_129S1SvImJ_G0039118.1 mouse_genomes_project 3 100186851 100186968 - Gm24216 snoRNA snoRNA MGP_129S1SvImJ_T0014090.1 MGP_129S1SvImJ_G0012179.1 mouse_genomes_project 3 60284760 60285255 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101005.1 MGP_129S1SvImJ_G0039072.1 mouse_genomes_project 3 3773133 3773246 + Gm22074 snoRNA snoRNA MGP_129S1SvImJ_T0014047.1 MGP_129S1SvImJ_G0012136.1 mouse_genomes_project 3 48234531 48234994 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001251.1 MGP_129S1SvImJ_G0001175.1 mouse_genomes_project 3 62524513 62524999 + TEC TEC MGP_129S1SvImJ_T0062687.1 MGP_129S1SvImJ_G0027646.1 mouse_genomes_project 3 98873489 98897029 + MGP_129S1SvImJ_P0062687 Sec22b protein_coding protein_coding MGP_129S1SvImJ_T0062688.1 MGP_129S1SvImJ_G0027646.1 mouse_genomes_project 3 98873515 98894153 + MGP_129S1SvImJ_P0062688 Sec22b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062689.1 MGP_129S1SvImJ_G0027646.1 mouse_genomes_project 3 98873524 98879964 + MGP_129S1SvImJ_P0062689 Sec22b protein_coding protein_coding MGP_129S1SvImJ_T0062690.1 MGP_129S1SvImJ_G0027646.1 mouse_genomes_project 3 98873526 98887507 + MGP_129S1SvImJ_P0062690 Sec22b protein_coding protein_coding MGP_129S1SvImJ_T0062691.1 MGP_129S1SvImJ_G0027646.1 mouse_genomes_project 3 98879253 98879964 + Sec22b protein_coding processed_transcript MGP_129S1SvImJ_T0018009.1 MGP_129S1SvImJ_G0015514.1 mouse_genomes_project 3 105091758 105097082 + Gm15471 processed_transcript retained_intron MGP_129S1SvImJ_T0018010.1 MGP_129S1SvImJ_G0015514.1 mouse_genomes_project 3 105091765 105097083 + Gm15471 processed_transcript antisense MGP_129S1SvImJ_T0060853.1 MGP_129S1SvImJ_G0027216.1 mouse_genomes_project 3 53459172 53512154 + MGP_129S1SvImJ_P0060853 Smad9 protein_coding protein_coding MGP_129S1SvImJ_T0014204.1 MGP_129S1SvImJ_G0012293.1 mouse_genomes_project 3 96550685 96550832 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007688.1 MGP_129S1SvImJ_G0006290.1 mouse_genomes_project 3 123838788 123847343 - A730020M07Rik lincRNA lincRNA MGP_129S1SvImJ_T0007689.1 MGP_129S1SvImJ_G0006290.1 mouse_genomes_project 3 123840989 123847346 - A730020M07Rik lincRNA lincRNA MGP_129S1SvImJ_T0007690.1 MGP_129S1SvImJ_G0006290.1 mouse_genomes_project 3 123840991 123847228 - A730020M07Rik lincRNA lincRNA MGP_129S1SvImJ_T0007530.1 MGP_129S1SvImJ_G0006171.1 mouse_genomes_project 3 39169214 39178934 - Gm42784 lincRNA lincRNA MGP_129S1SvImJ_T0014199.1 MGP_129S1SvImJ_G0012288.1 mouse_genomes_project 3 95498558 95499387 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014312.1 MGP_129S1SvImJ_G0012401.1 mouse_genomes_project 3 128679311 128680557 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007669.1 MGP_129S1SvImJ_G0006275.1 mouse_genomes_project 3 109700771 109723024 + Gm12524 lincRNA lincRNA MGP_129S1SvImJ_T0014221.1 MGP_129S1SvImJ_G0012310.1 mouse_genomes_project 3 100608168 100608878 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0061131.1 MGP_129S1SvImJ_G0027283.1 mouse_genomes_project 3 66741428 66764224 + MGP_129S1SvImJ_P0061131 Mfsd1 protein_coding protein_coding MGP_129S1SvImJ_T0061132.1 MGP_129S1SvImJ_G0027283.1 mouse_genomes_project 3 66743433 66756195 + Mfsd1 protein_coding processed_transcript MGP_129S1SvImJ_T0098865.1 MGP_129S1SvImJ_G0036944.1 mouse_genomes_project 3 16887182 16887778 + BC002189 sense_intronic sense_intronic MGP_129S1SvImJ_T0004220.1 MGP_129S1SvImJ_G0003722.1 mouse_genomes_project 3 26097518 26175957 - antisense antisense MGP_129S1SvImJ_T0004221.1 MGP_129S1SvImJ_G0003722.1 mouse_genomes_project 3 26134653 26138113 - antisense antisense MGP_129S1SvImJ_T0062893.1 MGP_129S1SvImJ_G0027696.1 mouse_genomes_project 3 105027893 105034912 + MGP_129S1SvImJ_P0062893 protein_coding protein_coding MGP_129S1SvImJ_T0098749.1 MGP_129S1SvImJ_G0036834.1 mouse_genomes_project 3 68313923 68314266 - Gm22009 scaRNA scaRNA MGP_129S1SvImJ_T0007557.1 MGP_129S1SvImJ_G0006190.1 mouse_genomes_project 3 52376679 52394514 + C820005J03Rik lincRNA lincRNA MGP_129S1SvImJ_T0061861.1 MGP_129S1SvImJ_G0027433.1 mouse_genomes_project 3 89560551 89575638 - MGP_129S1SvImJ_P0061861 Dcst1 protein_coding protein_coding MGP_129S1SvImJ_T0061862.1 MGP_129S1SvImJ_G0027433.1 mouse_genomes_project 3 89561355 89565879 - Dcst1 protein_coding retained_intron MGP_129S1SvImJ_T0061863.1 MGP_129S1SvImJ_G0027433.1 mouse_genomes_project 3 89563053 89565849 - Dcst1 protein_coding processed_transcript MGP_129S1SvImJ_T0061864.1 MGP_129S1SvImJ_G0027433.1 mouse_genomes_project 3 89563961 89565231 - Dcst1 protein_coding retained_intron MGP_129S1SvImJ_T0061865.1 MGP_129S1SvImJ_G0027433.1 mouse_genomes_project 3 89567840 89574647 - Dcst1 protein_coding retained_intron MGP_129S1SvImJ_T0061866.1 MGP_129S1SvImJ_G0027433.1 mouse_genomes_project 3 89567925 89574648 - Dcst1 protein_coding retained_intron MGP_129S1SvImJ_T0061326.1 MGP_129S1SvImJ_G0027328.1 mouse_genomes_project 3 82349028 82358739 - MGP_129S1SvImJ_P0061326 Npy2r protein_coding protein_coding MGP_129S1SvImJ_T0061327.1 MGP_129S1SvImJ_G0027328.1 mouse_genomes_project 3 82349031 82358707 - MGP_129S1SvImJ_P0061327 Npy2r protein_coding protein_coding MGP_129S1SvImJ_T0061328.1 MGP_129S1SvImJ_G0027328.1 mouse_genomes_project 3 82350594 82358615 - MGP_129S1SvImJ_P0061328 Npy2r protein_coding protein_coding MGP_129S1SvImJ_T0061329.1 MGP_129S1SvImJ_G0027328.1 mouse_genomes_project 3 82350594 82358615 - MGP_129S1SvImJ_P0061329 Npy2r protein_coding protein_coding MGP_129S1SvImJ_T0061338.1 MGP_129S1SvImJ_G0027333.1 mouse_genomes_project 3 82863418 82873184 - MGP_129S1SvImJ_P0061338 Fgb protein_coding protein_coding MGP_129S1SvImJ_T0099802.1 MGP_129S1SvImJ_G0037869.1 mouse_genomes_project 3 159854335 159854439 - Gm23038 snRNA snRNA MGP_129S1SvImJ_T0004421.1 MGP_129S1SvImJ_G0003859.1 mouse_genomes_project 3 156550877 156565262 + AI115009 antisense antisense MGP_129S1SvImJ_T0063080.1 MGP_129S1SvImJ_G0027737.1 mouse_genomes_project 3 108219118 108253010 - MGP_129S1SvImJ_P0063080 Cd53 protein_coding protein_coding MGP_129S1SvImJ_T0010560.1 MGP_129S1SvImJ_G0008676.1 mouse_genomes_project 3 120458437 120458510 + Mir137 miRNA miRNA MGP_129S1SvImJ_T0101007.1 MGP_129S1SvImJ_G0039074.1 mouse_genomes_project 3 5516758 5516877 - Gm23670 snoRNA snoRNA MGP_129S1SvImJ_T0017986.1 MGP_129S1SvImJ_G0015503.1 mouse_genomes_project 3 48990373 49080973 - Gm6209 processed_transcript lincRNA MGP_129S1SvImJ_T0017987.1 MGP_129S1SvImJ_G0015503.1 mouse_genomes_project 3 49052792 49057433 - Gm6209 processed_transcript retained_intron MGP_129S1SvImJ_T0101041.1 MGP_129S1SvImJ_G0039108.1 mouse_genomes_project 3 86328087 86328218 - Gm26343 snoRNA snoRNA MGP_129S1SvImJ_T0099755.1 MGP_129S1SvImJ_G0037822.1 mouse_genomes_project 3 86223865 86223976 + Gm23025 snRNA snRNA MGP_129S1SvImJ_T0098903.1 MGP_129S1SvImJ_G0036981.1 mouse_genomes_project 3 105431720 105435947 - Gm42702 sense_intronic sense_intronic MGP_129S1SvImJ_T0061036.1 MGP_129S1SvImJ_G0027261.1 mouse_genomes_project 3 62275908 62367419 + MGP_129S1SvImJ_P0061036 Mme protein_coding protein_coding MGP_129S1SvImJ_T0061037.1 MGP_129S1SvImJ_G0027261.1 mouse_genomes_project 3 62334830 62367788 + MGP_129S1SvImJ_P0061037 Mme protein_coding protein_coding MGP_129S1SvImJ_T0061038.1 MGP_129S1SvImJ_G0027261.1 mouse_genomes_project 3 62335012 62367780 + MGP_129S1SvImJ_P0061038 Mme protein_coding protein_coding MGP_129S1SvImJ_T0061039.1 MGP_129S1SvImJ_G0027261.1 mouse_genomes_project 3 62335125 62420863 + MGP_129S1SvImJ_P0061039 Mme protein_coding protein_coding MGP_129S1SvImJ_T0061040.1 MGP_129S1SvImJ_G0027261.1 mouse_genomes_project 3 62335436 62427079 + MGP_129S1SvImJ_P0061040 Mme protein_coding protein_coding MGP_129S1SvImJ_T0061041.1 MGP_129S1SvImJ_G0027261.1 mouse_genomes_project 3 62335659 62421390 + MGP_129S1SvImJ_P0061041 Mme protein_coding protein_coding MGP_129S1SvImJ_T0061042.1 MGP_129S1SvImJ_G0027261.1 mouse_genomes_project 3 62336624 62367660 + MGP_129S1SvImJ_P0061042 Mme protein_coding protein_coding MGP_129S1SvImJ_T0061043.1 MGP_129S1SvImJ_G0027261.1 mouse_genomes_project 3 62339736 62383439 + Mme protein_coding retained_intron MGP_129S1SvImJ_T0001155.1 MGP_129S1SvImJ_G0001081.1 mouse_genomes_project 3 29523234 29527289 + TEC TEC MGP_129S1SvImJ_T0014311.1 MGP_129S1SvImJ_G0012400.1 mouse_genomes_project 3 127409907 127410919 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063098.1 MGP_129S1SvImJ_G0027747.1 mouse_genomes_project 3 108805642 108814873 - MGP_129S1SvImJ_P0063098 Rbm15 protein_coding protein_coding MGP_129S1SvImJ_T0063099.1 MGP_129S1SvImJ_G0027747.1 mouse_genomes_project 3 108808307 108814301 - Rbm15 protein_coding retained_intron MGP_129S1SvImJ_T0063368.1 MGP_129S1SvImJ_G0027808.1 mouse_genomes_project 3 118139413 118143267 - MGP_129S1SvImJ_P0063368 Gpr88 protein_coding protein_coding MGP_129S1SvImJ_T0063369.1 MGP_129S1SvImJ_G0027808.1 mouse_genomes_project 3 118142322 118142853 - MGP_129S1SvImJ_P0063369 Gpr88 protein_coding protein_coding MGP_129S1SvImJ_T0063370.1 MGP_129S1SvImJ_G0027808.1 mouse_genomes_project 3 118142435 118143227 - Gpr88 protein_coding processed_transcript MGP_129S1SvImJ_T0014211.1 MGP_129S1SvImJ_G0012300.1 mouse_genomes_project 3 97311442 97312559 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062115.1 MGP_129S1SvImJ_G0027489.1 mouse_genomes_project 3 92774652 92776374 + MGP_129S1SvImJ_P0062115 Sprr2d protein_coding protein_coding MGP_129S1SvImJ_T0001311.1 MGP_129S1SvImJ_G0001235.1 mouse_genomes_project 3 118433471 118433910 + TEC TEC MGP_129S1SvImJ_T0060511.1 MGP_129S1SvImJ_G0027156.1 mouse_genomes_project 3 33916496 33936817 + MGP_129S1SvImJ_P0060511 D3Ertd254e protein_coding protein_coding MGP_129S1SvImJ_T0060512.1 MGP_129S1SvImJ_G0027156.1 mouse_genomes_project 3 33916641 33929147 + MGP_129S1SvImJ_P0060512 D3Ertd254e protein_coding protein_coding MGP_129S1SvImJ_T0060513.1 MGP_129S1SvImJ_G0027156.1 mouse_genomes_project 3 33925994 33936810 + MGP_129S1SvImJ_P0060513 D3Ertd254e protein_coding protein_coding MGP_129S1SvImJ_T0102491.1 MGP_129S1SvImJ_G0040325.1 mouse_genomes_project 3 94674471 94674664 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0011559.1 MGP_129S1SvImJ_G0009675.1 mouse_genomes_project 3 57869988 57870064 + Gm27793 misc_RNA misc_RNA MGP_129S1SvImJ_T0004234.1 MGP_129S1SvImJ_G0003732.1 mouse_genomes_project 3 31442827 31443518 + Gm43140 antisense antisense MGP_129S1SvImJ_T0007770.1 MGP_129S1SvImJ_G0006360.1 mouse_genomes_project 3 152852846 152856926 - Gm10287 lincRNA lincRNA MGP_129S1SvImJ_T0007771.1 MGP_129S1SvImJ_G0006360.1 mouse_genomes_project 3 152852852 152856926 - Gm10287 lincRNA lincRNA MGP_129S1SvImJ_T0007692.1 MGP_129S1SvImJ_G0006292.1 mouse_genomes_project 3 123916653 123917470 - Gm43607 lincRNA lincRNA MGP_129S1SvImJ_T0060838.1 MGP_129S1SvImJ_G0027214.1 mouse_genomes_project 3 53428932 53437128 - MGP_129S1SvImJ_P0060838 Exosc8 protein_coding protein_coding MGP_129S1SvImJ_T0060839.1 MGP_129S1SvImJ_G0027214.1 mouse_genomes_project 3 53428935 53429713 - Exosc8 protein_coding retained_intron MGP_129S1SvImJ_T0060840.1 MGP_129S1SvImJ_G0027214.1 mouse_genomes_project 3 53428936 53436772 - Exosc8 protein_coding retained_intron MGP_129S1SvImJ_T0060841.1 MGP_129S1SvImJ_G0027214.1 mouse_genomes_project 3 53430095 53436537 - Exosc8 protein_coding retained_intron MGP_129S1SvImJ_T0060842.1 MGP_129S1SvImJ_G0027214.1 mouse_genomes_project 3 53430107 53436048 - MGP_129S1SvImJ_P0060842 Exosc8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060843.1 MGP_129S1SvImJ_G0027214.1 mouse_genomes_project 3 53431552 53437102 - Exosc8 protein_coding retained_intron MGP_129S1SvImJ_T0060844.1 MGP_129S1SvImJ_G0027214.1 mouse_genomes_project 3 53432247 53436781 - MGP_129S1SvImJ_P0060844 Exosc8 protein_coding protein_coding MGP_129S1SvImJ_T0060845.1 MGP_129S1SvImJ_G0027214.1 mouse_genomes_project 3 53432396 53436072 - Exosc8 protein_coding retained_intron MGP_129S1SvImJ_T0060846.1 MGP_129S1SvImJ_G0027214.1 mouse_genomes_project 3 53432406 53433478 - Exosc8 protein_coding retained_intron MGP_129S1SvImJ_T0060847.1 MGP_129S1SvImJ_G0027214.1 mouse_genomes_project 3 53433855 53436770 - Exosc8 protein_coding retained_intron MGP_129S1SvImJ_T0060848.1 MGP_129S1SvImJ_G0027214.1 mouse_genomes_project 3 53435677 53436770 - Exosc8 protein_coding retained_intron MGP_129S1SvImJ_T0062111.1 MGP_129S1SvImJ_G0027485.1 mouse_genomes_project 3 92500499 92503371 - MGP_129S1SvImJ_P0062111 Lor protein_coding protein_coding MGP_129S1SvImJ_T0098578.1 MGP_129S1SvImJ_G0036663.1 mouse_genomes_project 3 22780865 22781000 + Gm24250 rRNA rRNA MGP_129S1SvImJ_T0007515.1 MGP_129S1SvImJ_G0006160.1 mouse_genomes_project 3 34315029 34321807 - Gm11549 lincRNA lincRNA MGP_129S1SvImJ_T0014380.1 MGP_129S1SvImJ_G0012469.1 mouse_genomes_project 3 152271594 152272109 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063113.1 MGP_129S1SvImJ_G0027752.1 mouse_genomes_project 3 109111767 109113317 - Strip1 protein_coding retained_intron MGP_129S1SvImJ_T0063114.1 MGP_129S1SvImJ_G0027752.1 mouse_genomes_project 3 109111767 109130930 - MGP_129S1SvImJ_P0063114 Strip1 protein_coding protein_coding MGP_129S1SvImJ_T0063115.1 MGP_129S1SvImJ_G0027752.1 mouse_genomes_project 3 109111770 109126080 - Strip1 protein_coding processed_transcript MGP_129S1SvImJ_T0063116.1 MGP_129S1SvImJ_G0027752.1 mouse_genomes_project 3 109116129 109119311 - Strip1 protein_coding processed_transcript MGP_129S1SvImJ_T0063117.1 MGP_129S1SvImJ_G0027752.1 mouse_genomes_project 3 109119687 109130930 - Strip1 protein_coding retained_intron MGP_129S1SvImJ_T0004303.1 MGP_129S1SvImJ_G0003783.1 mouse_genomes_project 3 94938633 94949290 - Gm43306 antisense antisense MGP_129S1SvImJ_T0014037.1 MGP_129S1SvImJ_G0012126.1 mouse_genomes_project 3 44855475 44855717 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001201.1 MGP_129S1SvImJ_G0001127.1 mouse_genomes_project 3 49319598 49323412 - TEC TEC MGP_129S1SvImJ_T0001363.1 MGP_129S1SvImJ_G0001286.1 mouse_genomes_project 3 132021248 132024735 + TEC TEC MGP_129S1SvImJ_T0099723.1 MGP_129S1SvImJ_G0037790.1 mouse_genomes_project 3 21782861 21782968 + Gm24704 snRNA snRNA MGP_129S1SvImJ_T0098911.1 MGP_129S1SvImJ_G0036989.1 mouse_genomes_project 3 105819153 105820363 - 4930509H03Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0098748.1 MGP_129S1SvImJ_G0036833.1 mouse_genomes_project 3 62185624 62185766 + Gm22433 scaRNA scaRNA MGP_129S1SvImJ_T0063221.1 MGP_129S1SvImJ_G0027777.1 mouse_genomes_project 3 109974531 109996408 - MGP_129S1SvImJ_P0063221 Sars protein_coding protein_coding MGP_129S1SvImJ_T0063222.1 MGP_129S1SvImJ_G0027777.1 mouse_genomes_project 3 109976278 109996379 - MGP_129S1SvImJ_P0063222 Sars protein_coding protein_coding MGP_129S1SvImJ_T0063223.1 MGP_129S1SvImJ_G0027777.1 mouse_genomes_project 3 109977897 109996353 - MGP_129S1SvImJ_P0063223 Sars protein_coding protein_coding MGP_129S1SvImJ_T0063224.1 MGP_129S1SvImJ_G0027777.1 mouse_genomes_project 3 109979016 109996419 - MGP_129S1SvImJ_P0063224 Sars protein_coding protein_coding MGP_129S1SvImJ_T0063225.1 MGP_129S1SvImJ_G0027777.1 mouse_genomes_project 3 109984047 109996366 - Sars protein_coding retained_intron MGP_129S1SvImJ_T0014275.1 MGP_129S1SvImJ_G0012364.1 mouse_genomes_project 3 115427615 115428222 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063181.1 MGP_129S1SvImJ_G0027768.1 mouse_genomes_project 3 109723452 109728894 + MGP_129S1SvImJ_P0063181 Amigo1 protein_coding protein_coding MGP_129S1SvImJ_T0063182.1 MGP_129S1SvImJ_G0027768.1 mouse_genomes_project 3 109723467 109728895 + MGP_129S1SvImJ_P0063182 Amigo1 protein_coding protein_coding MGP_129S1SvImJ_T0063183.1 MGP_129S1SvImJ_G0027768.1 mouse_genomes_project 3 109723475 109729404 + MGP_129S1SvImJ_P0063183 Amigo1 protein_coding protein_coding MGP_129S1SvImJ_T0063184.1 MGP_129S1SvImJ_G0027768.1 mouse_genomes_project 3 109725160 109728893 + MGP_129S1SvImJ_P0063184 Amigo1 protein_coding protein_coding MGP_129S1SvImJ_T0063185.1 MGP_129S1SvImJ_G0027768.1 mouse_genomes_project 3 109725218 109728885 + MGP_129S1SvImJ_P0063185 Amigo1 protein_coding protein_coding MGP_129S1SvImJ_T0001376.1 MGP_129S1SvImJ_G0001299.1 mouse_genomes_project 3 135838758 135841790 - TEC TEC MGP_129S1SvImJ_T0001418.1 MGP_129S1SvImJ_G0001341.1 mouse_genomes_project 3 162192141 162194611 - TEC TEC MGP_129S1SvImJ_T0062516.1 MGP_129S1SvImJ_G0027601.1 mouse_genomes_project 3 96715366 96733337 + MGP_129S1SvImJ_P0062516 Anp32e protein_coding protein_coding MGP_129S1SvImJ_T0062517.1 MGP_129S1SvImJ_G0027601.1 mouse_genomes_project 3 96715371 96733407 + MGP_129S1SvImJ_P0062517 Anp32e protein_coding protein_coding MGP_129S1SvImJ_T0062518.1 MGP_129S1SvImJ_G0027601.1 mouse_genomes_project 3 96715413 96733214 + MGP_129S1SvImJ_P0062518 Anp32e protein_coding protein_coding MGP_129S1SvImJ_T0062519.1 MGP_129S1SvImJ_G0027601.1 mouse_genomes_project 3 96715474 96735041 + MGP_129S1SvImJ_P0062519 Anp32e protein_coding protein_coding MGP_129S1SvImJ_T0062520.1 MGP_129S1SvImJ_G0027601.1 mouse_genomes_project 3 96715629 96733319 + MGP_129S1SvImJ_P0062520 Anp32e protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062521.1 MGP_129S1SvImJ_G0027601.1 mouse_genomes_project 3 96715670 96733090 + MGP_129S1SvImJ_P0062521 Anp32e protein_coding protein_coding MGP_129S1SvImJ_T0062522.1 MGP_129S1SvImJ_G0027601.1 mouse_genomes_project 3 96715685 96735163 + MGP_129S1SvImJ_P0062522 Anp32e protein_coding protein_coding MGP_129S1SvImJ_T0062523.1 MGP_129S1SvImJ_G0027601.1 mouse_genomes_project 3 96716624 96724923 + MGP_129S1SvImJ_P0062523 Anp32e protein_coding protein_coding MGP_129S1SvImJ_T0062524.1 MGP_129S1SvImJ_G0027601.1 mouse_genomes_project 3 96731971 96733295 + Anp32e protein_coding retained_intron MGP_129S1SvImJ_T0001321.1 MGP_129S1SvImJ_G0001245.1 mouse_genomes_project 3 123614094 123617433 - TEC TEC MGP_129S1SvImJ_T0014009.1 MGP_129S1SvImJ_G0012098.1 mouse_genomes_project 3 34921081 34921778 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001317.1 MGP_129S1SvImJ_G0001241.1 mouse_genomes_project 3 120925654 120927888 + TEC TEC MGP_129S1SvImJ_T0061876.1 MGP_129S1SvImJ_G0027437.1 mouse_genomes_project 3 89613760 89626313 - MGP_129S1SvImJ_P0061876 Flad1 protein_coding protein_coding MGP_129S1SvImJ_T0061877.1 MGP_129S1SvImJ_G0027437.1 mouse_genomes_project 3 89614725 89626306 - MGP_129S1SvImJ_P0061877 Flad1 protein_coding protein_coding MGP_129S1SvImJ_T0061878.1 MGP_129S1SvImJ_G0027437.1 mouse_genomes_project 3 89615423 89626312 - MGP_129S1SvImJ_P0061878 Flad1 protein_coding protein_coding MGP_129S1SvImJ_T0061879.1 MGP_129S1SvImJ_G0027437.1 mouse_genomes_project 3 89623171 89626224 - MGP_129S1SvImJ_P0061879 Flad1 protein_coding protein_coding MGP_129S1SvImJ_T0061880.1 MGP_129S1SvImJ_G0027437.1 mouse_genomes_project 3 89623396 89626313 - MGP_129S1SvImJ_P0061880 Flad1 protein_coding protein_coding MGP_129S1SvImJ_T0099045.1 MGP_129S1SvImJ_G0037113.1 mouse_genomes_project 3 148839478 148840513 + sense_overlapping sense_overlapping MGP_129S1SvImJ_T0101018.1 MGP_129S1SvImJ_G0039085.1 mouse_genomes_project 3 37746548 37746633 - Gm23831 snoRNA snoRNA MGP_129S1SvImJ_T0007485.1 MGP_129S1SvImJ_G0006135.1 mouse_genomes_project 3 18505042 18505761 - Gm29137 lincRNA lincRNA MGP_129S1SvImJ_T0010526.1 MGP_129S1SvImJ_G0008642.1 mouse_genomes_project 3 38476198 38476270 + Gm23810 miRNA miRNA MGP_129S1SvImJ_T0014345.1 MGP_129S1SvImJ_G0012434.1 mouse_genomes_project 3 138977186 138979320 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102484.1 MGP_129S1SvImJ_G0040318.1 mouse_genomes_project 3 94506846 94507041 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0062140.1 MGP_129S1SvImJ_G0027511.1 mouse_genomes_project 3 93161787 93163461 - MGP_129S1SvImJ_P0062140 Lce1e protein_coding protein_coding MGP_129S1SvImJ_T0060153.1 MGP_129S1SvImJ_G0027093.1 mouse_genomes_project 3 16716003 16815315 + MGP_129S1SvImJ_P0060153 Dnajc5b protein_coding protein_coding MGP_129S1SvImJ_T0060154.1 MGP_129S1SvImJ_G0027093.1 mouse_genomes_project 3 16716023 16815445 + MGP_129S1SvImJ_P0060154 Dnajc5b protein_coding protein_coding MGP_129S1SvImJ_T0060155.1 MGP_129S1SvImJ_G0027093.1 mouse_genomes_project 3 16737810 16815333 + MGP_129S1SvImJ_P0060155 Dnajc5b protein_coding protein_coding MGP_129S1SvImJ_T0060156.1 MGP_129S1SvImJ_G0027093.1 mouse_genomes_project 3 16738386 16815444 + MGP_129S1SvImJ_P0060156 Dnajc5b protein_coding protein_coding MGP_129S1SvImJ_T0001300.1 MGP_129S1SvImJ_G0001224.1 mouse_genomes_project 3 108034852 108036884 + TEC TEC MGP_129S1SvImJ_T0014225.1 MGP_129S1SvImJ_G0012314.1 mouse_genomes_project 3 101530144 101531160 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062662.1 MGP_129S1SvImJ_G0027641.1 mouse_genomes_project 3 98509388 98561257 - MGP_129S1SvImJ_P0062662 Chd1l protein_coding protein_coding MGP_129S1SvImJ_T0062663.1 MGP_129S1SvImJ_G0027641.1 mouse_genomes_project 3 98509661 98561225 - MGP_129S1SvImJ_P0062663 Chd1l protein_coding unknown_likely_coding MGP_129S1SvImJ_T0062664.1 MGP_129S1SvImJ_G0027641.1 mouse_genomes_project 3 98513099 98517422 - Chd1l protein_coding retained_intron MGP_129S1SvImJ_T0062665.1 MGP_129S1SvImJ_G0027641.1 mouse_genomes_project 3 98521344 98561246 - Chd1l protein_coding retained_intron MGP_129S1SvImJ_T0061381.1 MGP_129S1SvImJ_G0027342.1 mouse_genomes_project 3 84353755 84391688 - MGP_129S1SvImJ_P0061381 Fhdc1 protein_coding protein_coding MGP_129S1SvImJ_T0061382.1 MGP_129S1SvImJ_G0027342.1 mouse_genomes_project 3 84355595 84390753 - MGP_129S1SvImJ_P0061382 Fhdc1 protein_coding protein_coding MGP_129S1SvImJ_T0061383.1 MGP_129S1SvImJ_G0027342.1 mouse_genomes_project 3 84355668 84391652 - MGP_129S1SvImJ_P0061383 Fhdc1 protein_coding protein_coding MGP_129S1SvImJ_T0061384.1 MGP_129S1SvImJ_G0027342.1 mouse_genomes_project 3 84360374 84365253 - Fhdc1 protein_coding retained_intron MGP_129S1SvImJ_T0061385.1 MGP_129S1SvImJ_G0027342.1 mouse_genomes_project 3 84385768 84390244 - Fhdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0061638.1 MGP_129S1SvImJ_G0027400.1 mouse_genomes_project 3 88710331 88717707 - MGP_129S1SvImJ_P0061638 Rab25 protein_coding protein_coding MGP_129S1SvImJ_T0061639.1 MGP_129S1SvImJ_G0027400.1 mouse_genomes_project 3 88710611 88717656 - MGP_129S1SvImJ_P0061639 Rab25 protein_coding protein_coding MGP_129S1SvImJ_T0061640.1 MGP_129S1SvImJ_G0027400.1 mouse_genomes_project 3 88710978 88711817 - Rab25 protein_coding retained_intron MGP_129S1SvImJ_T0061641.1 MGP_129S1SvImJ_G0027400.1 mouse_genomes_project 3 88712944 88717689 - Rab25 protein_coding retained_intron MGP_129S1SvImJ_T0001401.1 MGP_129S1SvImJ_G0001324.1 mouse_genomes_project 3 156249675 156251454 + TEC TEC MGP_129S1SvImJ_T0014248.1 MGP_129S1SvImJ_G0012337.1 mouse_genomes_project 3 107475760 107476076 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013947.1 MGP_129S1SvImJ_G0012036.1 mouse_genomes_project 3 11428510 11428645 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063237.1 MGP_129S1SvImJ_G0027781.1 mouse_genomes_project 3 110132481 110147310 + Taf13 protein_coding processed_transcript MGP_129S1SvImJ_T0063238.1 MGP_129S1SvImJ_G0027781.1 mouse_genomes_project 3 110132481 110148463 + MGP_129S1SvImJ_P0063238 Taf13 protein_coding protein_coding MGP_129S1SvImJ_T0063239.1 MGP_129S1SvImJ_G0027781.1 mouse_genomes_project 3 110132493 110134087 + Taf13 protein_coding retained_intron MGP_129S1SvImJ_T0014281.1 MGP_129S1SvImJ_G0012370.1 mouse_genomes_project 3 117366072 117366508 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014205.1 MGP_129S1SvImJ_G0012294.1 mouse_genomes_project 3 96575257 96576152 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014198.1 MGP_129S1SvImJ_G0012287.1 mouse_genomes_project 3 95241078 95241451 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007543.1 MGP_129S1SvImJ_G0006178.1 mouse_genomes_project 3 47100801 47115420 - Gm37190 lincRNA lincRNA MGP_129S1SvImJ_T0098893.1 MGP_129S1SvImJ_G0036971.1 mouse_genomes_project 3 104597806 104606543 + sense_intronic sense_intronic MGP_129S1SvImJ_T0060094.1 MGP_129S1SvImJ_G0027075.1 mouse_genomes_project 3 11732506 11737511 - MGP_129S1SvImJ_P0060094 1810022K09Rik protein_coding protein_coding MGP_129S1SvImJ_T0060095.1 MGP_129S1SvImJ_G0027075.1 mouse_genomes_project 3 11732511 11737447 - MGP_129S1SvImJ_P0060095 1810022K09Rik protein_coding protein_coding MGP_129S1SvImJ_T0060096.1 MGP_129S1SvImJ_G0027075.1 mouse_genomes_project 3 11732511 11737487 - MGP_129S1SvImJ_P0060096 1810022K09Rik protein_coding protein_coding MGP_129S1SvImJ_T0060097.1 MGP_129S1SvImJ_G0027075.1 mouse_genomes_project 3 11732515 11737480 - MGP_129S1SvImJ_P0060097 1810022K09Rik protein_coding protein_coding MGP_129S1SvImJ_T0060098.1 MGP_129S1SvImJ_G0027075.1 mouse_genomes_project 3 11735409 11737469 - 1810022K09Rik protein_coding retained_intron MGP_129S1SvImJ_T0061256.1 MGP_129S1SvImJ_G0027313.1 mouse_genomes_project 3 79298365 79310274 + Ppid protein_coding retained_intron MGP_129S1SvImJ_T0061257.1 MGP_129S1SvImJ_G0027313.1 mouse_genomes_project 3 79298388 79310648 + MGP_129S1SvImJ_P0061257 Ppid protein_coding protein_coding MGP_129S1SvImJ_T0061258.1 MGP_129S1SvImJ_G0027313.1 mouse_genomes_project 3 79298511 79302321 + Ppid protein_coding processed_transcript MGP_129S1SvImJ_T0061259.1 MGP_129S1SvImJ_G0027313.1 mouse_genomes_project 3 79300721 79304774 + MGP_129S1SvImJ_P0061259 Ppid protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061260.1 MGP_129S1SvImJ_G0027313.1 mouse_genomes_project 3 79303169 79305200 + Ppid protein_coding retained_intron MGP_129S1SvImJ_T0061261.1 MGP_129S1SvImJ_G0027313.1 mouse_genomes_project 3 79305720 79309326 + Ppid protein_coding retained_intron MGP_129S1SvImJ_T0014352.1 MGP_129S1SvImJ_G0012441.1 mouse_genomes_project 3 141555975 141556344 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001223.1 MGP_129S1SvImJ_G0001147.1 mouse_genomes_project 3 50491138 50491757 - TEC TEC MGP_129S1SvImJ_T0013988.1 MGP_129S1SvImJ_G0012077.1 mouse_genomes_project 3 27224092 27224231 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0062143.1 MGP_129S1SvImJ_G0027514.1 mouse_genomes_project 3 93210043 93214354 - MGP_129S1SvImJ_P0062143 protein_coding protein_coding MGP_129S1SvImJ_T0014363.1 MGP_129S1SvImJ_G0012452.1 mouse_genomes_project 3 143985547 143986079 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063259.1 MGP_129S1SvImJ_G0027785.1 mouse_genomes_project 3 110312407 110363534 + MGP_129S1SvImJ_P0063259 Aknad1 protein_coding protein_coding MGP_129S1SvImJ_T0063260.1 MGP_129S1SvImJ_G0027785.1 mouse_genomes_project 3 110316231 110355577 + MGP_129S1SvImJ_P0063260 Aknad1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0063261.1 MGP_129S1SvImJ_G0027785.1 mouse_genomes_project 3 110326990 110338373 + Aknad1 protein_coding retained_intron MGP_129S1SvImJ_T0063262.1 MGP_129S1SvImJ_G0027785.1 mouse_genomes_project 3 110334661 110355282 + Aknad1 protein_coding retained_intron MGP_129S1SvImJ_T0060425.1 MGP_129S1SvImJ_G0027144.1 mouse_genomes_project 3 30442315 30548067 + MGP_129S1SvImJ_P0060425 Usp13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060426.1 MGP_129S1SvImJ_G0027144.1 mouse_genomes_project 3 30442363 30568647 + MGP_129S1SvImJ_P0060426 Usp13 protein_coding protein_coding MGP_129S1SvImJ_T0060427.1 MGP_129S1SvImJ_G0027144.1 mouse_genomes_project 3 30548036 30568707 + MGP_129S1SvImJ_P0060427 Usp13 protein_coding protein_coding MGP_129S1SvImJ_T0064373.1 MGP_129S1SvImJ_G0027992.1 mouse_genomes_project 3 156258825 156325492 + MGP_129S1SvImJ_P0064373 Zzz3 protein_coding protein_coding MGP_129S1SvImJ_T0064374.1 MGP_129S1SvImJ_G0027992.1 mouse_genomes_project 3 156258877 156294016 + Zzz3 protein_coding retained_intron MGP_129S1SvImJ_T0064375.1 MGP_129S1SvImJ_G0027992.1 mouse_genomes_project 3 156259355 156328846 + MGP_129S1SvImJ_P0064375 Zzz3 protein_coding protein_coding MGP_129S1SvImJ_T0064376.1 MGP_129S1SvImJ_G0027992.1 mouse_genomes_project 3 156259384 156315290 + Zzz3 protein_coding processed_transcript MGP_129S1SvImJ_T0064377.1 MGP_129S1SvImJ_G0027992.1 mouse_genomes_project 3 156259431 156314988 + Zzz3 protein_coding processed_transcript MGP_129S1SvImJ_T0064378.1 MGP_129S1SvImJ_G0027992.1 mouse_genomes_project 3 156259483 156325570 + MGP_129S1SvImJ_P0064378 Zzz3 protein_coding protein_coding MGP_129S1SvImJ_T0064379.1 MGP_129S1SvImJ_G0027992.1 mouse_genomes_project 3 156260030 156325495 + MGP_129S1SvImJ_P0064379 Zzz3 protein_coding protein_coding MGP_129S1SvImJ_T0064380.1 MGP_129S1SvImJ_G0027992.1 mouse_genomes_project 3 156260040 156328846 + MGP_129S1SvImJ_P0064380 Zzz3 protein_coding protein_coding MGP_129S1SvImJ_T0064381.1 MGP_129S1SvImJ_G0027992.1 mouse_genomes_project 3 156302060 156305250 + Zzz3 protein_coding retained_intron MGP_129S1SvImJ_T0064382.1 MGP_129S1SvImJ_G0027992.1 mouse_genomes_project 3 156323434 156324836 + Zzz3 protein_coding processed_transcript MGP_129S1SvImJ_T0007577.1 MGP_129S1SvImJ_G0006205.1 mouse_genomes_project 3 68360040 68394115 + Gm1647 lincRNA lincRNA MGP_129S1SvImJ_T0101030.1 MGP_129S1SvImJ_G0039097.1 mouse_genomes_project 3 66731836 66731968 - Gm25919 snoRNA snoRNA MGP_129S1SvImJ_T0014305.1 MGP_129S1SvImJ_G0012394.1 mouse_genomes_project 3 125458762 125459449 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001143.1 MGP_129S1SvImJ_G0001069.1 mouse_genomes_project 3 24875666 24876895 + TEC TEC MGP_129S1SvImJ_T0014197.1 MGP_129S1SvImJ_G0012286.1 mouse_genomes_project 3 95169756 95169950 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007568.1 MGP_129S1SvImJ_G0006197.1 mouse_genomes_project 3 57547804 57648586 + 4930593A02Rik lincRNA lincRNA MGP_129S1SvImJ_T0007569.1 MGP_129S1SvImJ_G0006197.1 mouse_genomes_project 3 57588863 57657742 + 4930593A02Rik lincRNA lincRNA MGP_129S1SvImJ_T0014315.1 MGP_129S1SvImJ_G0012404.1 mouse_genomes_project 3 130202376 130205655 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064014.1 MGP_129S1SvImJ_G0027928.1 mouse_genomes_project 3 141313652 141335955 + Adh1 protein_coding processed_transcript MGP_129S1SvImJ_T0064015.1 MGP_129S1SvImJ_G0027928.1 mouse_genomes_project 3 141329912 141343867 + MGP_129S1SvImJ_P0064015 Adh1 protein_coding protein_coding MGP_129S1SvImJ_T0064016.1 MGP_129S1SvImJ_G0027928.1 mouse_genomes_project 3 141330063 141334119 + Adh1 protein_coding retained_intron MGP_129S1SvImJ_T0064017.1 MGP_129S1SvImJ_G0027928.1 mouse_genomes_project 3 141330069 141343867 + MGP_129S1SvImJ_P0064017 Adh1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062049.1 MGP_129S1SvImJ_G0027465.1 mouse_genomes_project 3 90793554 90807254 + Ilf2 protein_coding retained_intron MGP_129S1SvImJ_T0062050.1 MGP_129S1SvImJ_G0027465.1 mouse_genomes_project 3 90793568 90796735 + Ilf2 protein_coding retained_intron MGP_129S1SvImJ_T0062051.1 MGP_129S1SvImJ_G0027465.1 mouse_genomes_project 3 90793575 90800108 + Ilf2 protein_coding retained_intron MGP_129S1SvImJ_T0062052.1 MGP_129S1SvImJ_G0027465.1 mouse_genomes_project 3 90793575 90807670 + MGP_129S1SvImJ_P0062052 Ilf2 protein_coding protein_coding MGP_129S1SvImJ_T0062053.1 MGP_129S1SvImJ_G0027465.1 mouse_genomes_project 3 90793585 90804753 + Ilf2 protein_coding retained_intron MGP_129S1SvImJ_T0062054.1 MGP_129S1SvImJ_G0027465.1 mouse_genomes_project 3 90798107 90805679 + Ilf2 protein_coding retained_intron MGP_129S1SvImJ_T0063547.1 MGP_129S1SvImJ_G0027841.1 mouse_genomes_project 3 125010843 125148928 + MGP_129S1SvImJ_P0063547 Pde5a protein_coding protein_coding MGP_129S1SvImJ_T0063548.1 MGP_129S1SvImJ_G0027841.1 mouse_genomes_project 3 125011466 125148926 + MGP_129S1SvImJ_P0063548 Pde5a protein_coding protein_coding MGP_129S1SvImJ_T0063549.1 MGP_129S1SvImJ_G0027841.1 mouse_genomes_project 3 125012118 125060937 + Pde5a protein_coding retained_intron MGP_129S1SvImJ_T0063550.1 MGP_129S1SvImJ_G0027841.1 mouse_genomes_project 3 125081949 125094508 + Pde5a protein_coding processed_transcript MGP_129S1SvImJ_T0061833.1 MGP_129S1SvImJ_G0027428.1 mouse_genomes_project 3 89477163 89479441 - Slc50a1 protein_coding retained_intron MGP_129S1SvImJ_T0061834.1 MGP_129S1SvImJ_G0027428.1 mouse_genomes_project 3 89477163 89479444 - Slc50a1 protein_coding retained_intron MGP_129S1SvImJ_T0061835.1 MGP_129S1SvImJ_G0027428.1 mouse_genomes_project 3 89477163 89479413 - MGP_129S1SvImJ_P0061835 Slc50a1 protein_coding protein_coding MGP_129S1SvImJ_T0061836.1 MGP_129S1SvImJ_G0027428.1 mouse_genomes_project 3 89477163 89479488 - MGP_129S1SvImJ_P0061836 Slc50a1 protein_coding protein_coding MGP_129S1SvImJ_T0061837.1 MGP_129S1SvImJ_G0027428.1 mouse_genomes_project 3 89477163 89479397 - MGP_129S1SvImJ_P0061837 Slc50a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061838.1 MGP_129S1SvImJ_G0027428.1 mouse_genomes_project 3 89477165 89479443 - Slc50a1 protein_coding retained_intron MGP_129S1SvImJ_T0061839.1 MGP_129S1SvImJ_G0027428.1 mouse_genomes_project 3 89477165 89479487 - Slc50a1 protein_coding retained_intron MGP_129S1SvImJ_T0061840.1 MGP_129S1SvImJ_G0027428.1 mouse_genomes_project 3 89477988 89479488 - MGP_129S1SvImJ_P0061840 Slc50a1 protein_coding protein_coding MGP_129S1SvImJ_T0061841.1 MGP_129S1SvImJ_G0027428.1 mouse_genomes_project 3 89478062 89479145 - Slc50a1 protein_coding processed_transcript MGP_129S1SvImJ_T0007710.1 MGP_129S1SvImJ_G0006306.1 mouse_genomes_project 3 133595436 133599874 - lincRNA lincRNA MGP_129S1SvImJ_T0004230.1 MGP_129S1SvImJ_G0003728.1 mouse_genomes_project 3 30123816 30124358 - Gm37592 antisense antisense MGP_129S1SvImJ_T0060786.1 MGP_129S1SvImJ_G0027204.1 mouse_genomes_project 3 51620524 51849220 + MGP_129S1SvImJ_P0060786 Lhfp protein_coding protein_coding MGP_129S1SvImJ_T0060787.1 MGP_129S1SvImJ_G0027204.1 mouse_genomes_project 3 51620555 51849216 + Lhfp protein_coding processed_transcript MGP_129S1SvImJ_T0060788.1 MGP_129S1SvImJ_G0027204.1 mouse_genomes_project 3 51620579 51849220 + MGP_129S1SvImJ_P0060788 Lhfp protein_coding protein_coding MGP_129S1SvImJ_T0060789.1 MGP_129S1SvImJ_G0027204.1 mouse_genomes_project 3 51811934 51815037 + Lhfp protein_coding retained_intron MGP_129S1SvImJ_T0062889.1 MGP_129S1SvImJ_G0027695.1 mouse_genomes_project 3 105010764 105022769 - Olfml3 protein_coding processed_transcript MGP_129S1SvImJ_T0062890.1 MGP_129S1SvImJ_G0027695.1 mouse_genomes_project 3 105020206 105026536 - MGP_129S1SvImJ_P0062890 Olfml3 protein_coding protein_coding MGP_129S1SvImJ_T0062891.1 MGP_129S1SvImJ_G0027695.1 mouse_genomes_project 3 105020222 105021096 - MGP_129S1SvImJ_P0062891 Olfml3 protein_coding protein_coding MGP_129S1SvImJ_T0062892.1 MGP_129S1SvImJ_G0027695.1 mouse_genomes_project 3 105022239 105026503 - Olfml3 protein_coding retained_intron MGP_129S1SvImJ_T0060965.1 MGP_129S1SvImJ_G0027242.1 mouse_genomes_project 3 57971860 57977234 - MGP_129S1SvImJ_P0060965 Gpr171 protein_coding protein_coding MGP_129S1SvImJ_T0014058.1 MGP_129S1SvImJ_G0012147.1 mouse_genomes_project 3 51535015 51535334 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101691.1 MGP_129S1SvImJ_G0039704.1 mouse_genomes_project 3 94902488 94903185 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101692.1 MGP_129S1SvImJ_G0039704.1 mouse_genomes_project 3 94902664 94903427 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0099762.1 MGP_129S1SvImJ_G0037829.1 mouse_genomes_project 3 89399578 89399685 - Gm23269 snRNA snRNA MGP_129S1SvImJ_T0014125.1 MGP_129S1SvImJ_G0012214.1 mouse_genomes_project 3 69727663 69728222 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099731.1 MGP_129S1SvImJ_G0037798.1 mouse_genomes_project 3 47309998 47310162 + Gm23511 snRNA snRNA MGP_129S1SvImJ_T0004268.1 MGP_129S1SvImJ_G0003758.1 mouse_genomes_project 3 63010218 63015862 + Gm26850 antisense antisense MGP_129S1SvImJ_T0004269.1 MGP_129S1SvImJ_G0003758.1 mouse_genomes_project 3 63010220 63012036 + Gm26850 antisense antisense MGP_129S1SvImJ_T0060248.1 MGP_129S1SvImJ_G0027112.1 mouse_genomes_project 3 24735036 25052840 - MGP_129S1SvImJ_P0060248 Fndc3b protein_coding protein_coding MGP_129S1SvImJ_T0060249.1 MGP_129S1SvImJ_G0027112.1 mouse_genomes_project 3 24735036 25052881 - MGP_129S1SvImJ_P0060249 Fndc3b protein_coding protein_coding MGP_129S1SvImJ_T0060250.1 MGP_129S1SvImJ_G0027112.1 mouse_genomes_project 3 24821488 25053749 - Fndc3b protein_coding retained_intron MGP_129S1SvImJ_T0060251.1 MGP_129S1SvImJ_G0027112.1 mouse_genomes_project 3 24828493 25053681 - MGP_129S1SvImJ_P0060251 Fndc3b protein_coding protein_coding MGP_129S1SvImJ_T0062227.1 MGP_129S1SvImJ_G0027554.1 mouse_genomes_project 3 95076514 95162376 - MGP_129S1SvImJ_P0062227 Snx27 protein_coding protein_coding MGP_129S1SvImJ_T0062228.1 MGP_129S1SvImJ_G0027554.1 mouse_genomes_project 3 95078285 95162209 - MGP_129S1SvImJ_P0062228 Snx27 protein_coding protein_coding MGP_129S1SvImJ_T0062229.1 MGP_129S1SvImJ_G0027554.1 mouse_genomes_project 3 95080013 95105219 - Snx27 protein_coding processed_transcript MGP_129S1SvImJ_T0062230.1 MGP_129S1SvImJ_G0027554.1 mouse_genomes_project 3 95080099 95162339 - MGP_129S1SvImJ_P0062230 Snx27 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062231.1 MGP_129S1SvImJ_G0027554.1 mouse_genomes_project 3 95080109 95100019 - Snx27 protein_coding processed_transcript MGP_129S1SvImJ_T0062232.1 MGP_129S1SvImJ_G0027554.1 mouse_genomes_project 3 95081026 95138245 - MGP_129S1SvImJ_P0062232 Snx27 protein_coding protein_coding MGP_129S1SvImJ_T0062233.1 MGP_129S1SvImJ_G0027554.1 mouse_genomes_project 3 95100037 95138009 - MGP_129S1SvImJ_P0062233 Snx27 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0062234.1 MGP_129S1SvImJ_G0027554.1 mouse_genomes_project 3 95112149 95112798 - Snx27 protein_coding processed_transcript MGP_129S1SvImJ_T0010565.1 MGP_129S1SvImJ_G0008681.1 mouse_genomes_project 3 130034951 130035019 + Mir302c miRNA miRNA MGP_129S1SvImJ_T0001241.1 MGP_129S1SvImJ_G0001165.1 mouse_genomes_project 3 54926818 54930434 - TEC TEC MGP_129S1SvImJ_T0001417.1 MGP_129S1SvImJ_G0001340.1 mouse_genomes_project 3 162140269 162143629 + TEC TEC MGP_129S1SvImJ_T0061164.1 MGP_129S1SvImJ_G0027291.1 mouse_genomes_project 3 68225774 68259364 + MGP_129S1SvImJ_P0061164 Smc4 protein_coding protein_coding MGP_129S1SvImJ_T0061165.1 MGP_129S1SvImJ_G0027291.1 mouse_genomes_project 3 68226006 68241407 + MGP_129S1SvImJ_P0061165 Smc4 protein_coding protein_coding MGP_129S1SvImJ_T0061166.1 MGP_129S1SvImJ_G0027291.1 mouse_genomes_project 3 68226027 68259359 + MGP_129S1SvImJ_P0061166 Smc4 protein_coding protein_coding MGP_129S1SvImJ_T0061167.1 MGP_129S1SvImJ_G0027291.1 mouse_genomes_project 3 68226044 68259364 + MGP_129S1SvImJ_P0061167 Smc4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061168.1 MGP_129S1SvImJ_G0027291.1 mouse_genomes_project 3 68226051 68251754 + MGP_129S1SvImJ_P0061168 Smc4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061169.1 MGP_129S1SvImJ_G0027291.1 mouse_genomes_project 3 68239788 68241472 + Smc4 protein_coding retained_intron MGP_129S1SvImJ_T0061170.1 MGP_129S1SvImJ_G0027291.1 mouse_genomes_project 3 68239994 68242630 + Smc4 protein_coding processed_transcript MGP_129S1SvImJ_T0061171.1 MGP_129S1SvImJ_G0027291.1 mouse_genomes_project 3 68242216 68244703 + Smc4 protein_coding retained_intron MGP_129S1SvImJ_T0061172.1 MGP_129S1SvImJ_G0027291.1 mouse_genomes_project 3 68245350 68247600 + Smc4 protein_coding retained_intron MGP_129S1SvImJ_T0061173.1 MGP_129S1SvImJ_G0027291.1 mouse_genomes_project 3 68247492 68251198 + MGP_129S1SvImJ_P0061173 Smc4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061174.1 MGP_129S1SvImJ_G0027291.1 mouse_genomes_project 3 68255113 68257824 + Smc4 protein_coding retained_intron MGP_129S1SvImJ_T0014031.1 MGP_129S1SvImJ_G0012120.1 mouse_genomes_project 3 42015542 42015888 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001384.1 MGP_129S1SvImJ_G0001307.1 mouse_genomes_project 3 139676598 139678121 + TEC TEC MGP_129S1SvImJ_T0007740.1 MGP_129S1SvImJ_G0006334.1 mouse_genomes_project 3 146100719 146111704 + 9530052C20Rik lincRNA lincRNA MGP_129S1SvImJ_T0014196.1 MGP_129S1SvImJ_G0012285.1 mouse_genomes_project 3 95028452 95029370 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102466.1 MGP_129S1SvImJ_G0040300.1 mouse_genomes_project 3 80767498 80767966 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099721.1 MGP_129S1SvImJ_G0037788.1 mouse_genomes_project 3 15352332 15352496 - Gm23686 snRNA snRNA MGP_129S1SvImJ_T0101037.1 MGP_129S1SvImJ_G0039104.1 mouse_genomes_project 3 85977989 85978108 + Gm25876 snoRNA snoRNA MGP_129S1SvImJ_T0001197.1 MGP_129S1SvImJ_G0001123.1 mouse_genomes_project 3 48871245 48875247 - TEC TEC MGP_129S1SvImJ_T0007745.1 MGP_129S1SvImJ_G0006338.1 mouse_genomes_project 3 146565830 146567462 + Gm43613 lincRNA lincRNA MGP_129S1SvImJ_T0007713.1 MGP_129S1SvImJ_G0006309.1 mouse_genomes_project 3 133688259 133689614 - Gm43349 lincRNA lincRNA MGP_129S1SvImJ_T0062130.1 MGP_129S1SvImJ_G0027503.1 mouse_genomes_project 3 93030094 93032432 - MGP_129S1SvImJ_P0062130 Smcp protein_coding protein_coding MGP_129S1SvImJ_T0062131.1 MGP_129S1SvImJ_G0027503.1 mouse_genomes_project 3 93030094 93035183 - MGP_129S1SvImJ_P0062131 Smcp protein_coding protein_coding MGP_129S1SvImJ_T0004371.1 MGP_129S1SvImJ_G0003823.1 mouse_genomes_project 3 118541312 118541851 + Gm42457 antisense antisense MGP_129S1SvImJ_T0007548.1 MGP_129S1SvImJ_G0006182.1 mouse_genomes_project 3 50646582 50746252 - Gm37202 lincRNA lincRNA MGP_129S1SvImJ_T0061395.1 MGP_129S1SvImJ_G0027347.1 mouse_genomes_project 3 84782039 84952805 + MGP_129S1SvImJ_P0061395 Fbxw7 protein_coding protein_coding MGP_129S1SvImJ_T0061396.1 MGP_129S1SvImJ_G0027347.1 mouse_genomes_project 3 84782249 84951289 + Fbxw7 protein_coding retained_intron MGP_129S1SvImJ_T0061397.1 MGP_129S1SvImJ_G0027347.1 mouse_genomes_project 3 84830809 84952805 + MGP_129S1SvImJ_P0061397 Fbxw7 protein_coding protein_coding MGP_129S1SvImJ_T0061398.1 MGP_129S1SvImJ_G0027347.1 mouse_genomes_project 3 84894100 84952804 + MGP_129S1SvImJ_P0061398 Fbxw7 protein_coding protein_coding MGP_129S1SvImJ_T0061399.1 MGP_129S1SvImJ_G0027347.1 mouse_genomes_project 3 84922276 84951253 + MGP_129S1SvImJ_P0061399 Fbxw7 protein_coding protein_coding MGP_129S1SvImJ_T0007521.1 MGP_129S1SvImJ_G0006165.1 mouse_genomes_project 3 35969730 35994981 - lincRNA lincRNA MGP_129S1SvImJ_T0004380.1 MGP_129S1SvImJ_G0003830.1 mouse_genomes_project 3 126757795 126759553 + Gm42823 antisense antisense MGP_129S1SvImJ_T0014123.1 MGP_129S1SvImJ_G0012212.1 mouse_genomes_project 3 69361816 69362543 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007594.1 MGP_129S1SvImJ_G0006218.1 mouse_genomes_project 3 80717270 80728125 + Gm42468 lincRNA lincRNA MGP_129S1SvImJ_T0007489.1 MGP_129S1SvImJ_G0006139.1 mouse_genomes_project 3 20296275 20299250 + Gm37021 lincRNA lincRNA MGP_129S1SvImJ_T0001159.1 MGP_129S1SvImJ_G0001085.1 mouse_genomes_project 3 30677226 30680053 - TEC TEC MGP_129S1SvImJ_T0014247.1 MGP_129S1SvImJ_G0012336.1 mouse_genomes_project 3 107439852 107440320 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0063492.1 MGP_129S1SvImJ_G0027832.1 mouse_genomes_project 3 123875649 123888659 + MGP_129S1SvImJ_P0063492 4930432M17Rik protein_coding protein_coding MGP_129S1SvImJ_T0063493.1 MGP_129S1SvImJ_G0027832.1 mouse_genomes_project 3 123876204 123888512 + MGP_129S1SvImJ_P0063493 4930432M17Rik protein_coding protein_coding MGP_129S1SvImJ_T0011565.1 MGP_129S1SvImJ_G0009681.1 mouse_genomes_project 3 89511367 89511619 + Gm22642 misc_RNA misc_RNA MGP_129S1SvImJ_T0062003.1 MGP_129S1SvImJ_G0027457.1 mouse_genomes_project 3 90520494 90526048 + MGP_129S1SvImJ_P0062003 Jtb protein_coding protein_coding MGP_129S1SvImJ_T0062004.1 MGP_129S1SvImJ_G0027457.1 mouse_genomes_project 3 90520509 90525754 + MGP_129S1SvImJ_P0062004 Jtb protein_coding protein_coding MGP_129S1SvImJ_T0062005.1 MGP_129S1SvImJ_G0027457.1 mouse_genomes_project 3 90520531 90525629 + Jtb protein_coding retained_intron MGP_129S1SvImJ_T0062006.1 MGP_129S1SvImJ_G0027457.1 mouse_genomes_project 3 90520944 90522932 + Jtb protein_coding retained_intron MGP_129S1SvImJ_T0001186.1 MGP_129S1SvImJ_G0001112.1 mouse_genomes_project 3 39799629 39803157 + TEC TEC MGP_129S1SvImJ_T0062170.1 MGP_129S1SvImJ_G0027533.1 mouse_genomes_project 3 93882998 93887770 + MGP_129S1SvImJ_P0062170 Rptn protein_coding protein_coding MGP_129S1SvImJ_T0014282.1 MGP_129S1SvImJ_G0012371.1 mouse_genomes_project 3 117811033 117812170 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099793.1 MGP_129S1SvImJ_G0037860.1 mouse_genomes_project 3 140062261 140062368 + Gm26107 snRNA snRNA MGP_129S1SvImJ_T0007513.1 MGP_129S1SvImJ_G0006158.1 mouse_genomes_project 3 34052768 34055102 - Gm43204 lincRNA lincRNA MGP_129S1SvImJ_T0001420.1 MGP_129S1SvImJ_G0001343.1 mouse_genomes_project 3 162364562 162366162 + TEC TEC MGP_129S1SvImJ_T0014014.1 MGP_129S1SvImJ_G0012103.1 mouse_genomes_project 3 35462113 35462775 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013913.1 MGP_129S1SvImJ_G0012002.1 mouse_genomes_project 3 1647745 1648711 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098711.1 MGP_129S1SvImJ_G0036796.1 mouse_genomes_project 3 13354179 13354508 - Gm25863 ribozyme ribozyme MGP_129S1SvImJ_T0018043.1 MGP_129S1SvImJ_G0015525.1 mouse_genomes_project 3 130666407 130784320 - D030025E07Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018044.1 MGP_129S1SvImJ_G0015525.1 mouse_genomes_project 3 130673595 130682850 - D030025E07Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018045.1 MGP_129S1SvImJ_G0015525.1 mouse_genomes_project 3 130673972 130784323 - D030025E07Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018046.1 MGP_129S1SvImJ_G0015525.1 mouse_genomes_project 3 130691372 130784270 - D030025E07Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018047.1 MGP_129S1SvImJ_G0015525.1 mouse_genomes_project 3 130743448 130784309 - D030025E07Rik processed_transcript lincRNA MGP_129S1SvImJ_T0007522.1 MGP_129S1SvImJ_G0006166.1 mouse_genomes_project 3 36076319 36081244 - 5430434I15Rik lincRNA lincRNA MGP_129S1SvImJ_T0060873.1 MGP_129S1SvImJ_G0027221.1 mouse_genomes_project 3 53864744 53901029 + MGP_129S1SvImJ_P0060873 Ccdc169 protein_coding protein_coding MGP_129S1SvImJ_T0060874.1 MGP_129S1SvImJ_G0027221.1 mouse_genomes_project 3 53867442 53899649 + MGP_129S1SvImJ_P0060874 Ccdc169 protein_coding protein_coding MGP_129S1SvImJ_T0060875.1 MGP_129S1SvImJ_G0027221.1 mouse_genomes_project 3 53867442 53898597 + MGP_129S1SvImJ_P0060875 Ccdc169 protein_coding protein_coding MGP_129S1SvImJ_T0060876.1 MGP_129S1SvImJ_G0027221.1 mouse_genomes_project 3 53867459 53884476 + MGP_129S1SvImJ_P0060876 Ccdc169 protein_coding protein_coding MGP_129S1SvImJ_T0060877.1 MGP_129S1SvImJ_G0027221.1 mouse_genomes_project 3 53869690 53899703 + MGP_129S1SvImJ_P0060877 Ccdc169 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0060878.1 MGP_129S1SvImJ_G0027221.1 mouse_genomes_project 3 53869690 53899703 + MGP_129S1SvImJ_P0060878 Ccdc169 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0007581.1 MGP_129S1SvImJ_G0006208.1 mouse_genomes_project 3 72732006 72873392 + Gm38353 lincRNA lincRNA MGP_129S1SvImJ_T0061924.1 MGP_129S1SvImJ_G0027449.1 mouse_genomes_project 3 90193581 90218814 - MGP_129S1SvImJ_P0061924 Atp8b2 protein_coding protein_coding MGP_129S1SvImJ_T0061925.1 MGP_129S1SvImJ_G0027449.1 mouse_genomes_project 3 90193581 90215935 - MGP_129S1SvImJ_P0061925 Atp8b2 protein_coding protein_coding MGP_129S1SvImJ_T0061926.1 MGP_129S1SvImJ_G0027449.1 mouse_genomes_project 3 90193589 90207466 - Atp8b2 protein_coding retained_intron MGP_129S1SvImJ_T0061927.1 MGP_129S1SvImJ_G0027449.1 mouse_genomes_project 3 90194256 90218585 - Atp8b2 protein_coding retained_intron MGP_129S1SvImJ_T0061928.1 MGP_129S1SvImJ_G0027449.1 mouse_genomes_project 3 90194949 90218814 - MGP_129S1SvImJ_P0061928 Atp8b2 protein_coding protein_coding MGP_129S1SvImJ_T0061929.1 MGP_129S1SvImJ_G0027449.1 mouse_genomes_project 3 90195297 90197858 - MGP_129S1SvImJ_P0061929 Atp8b2 protein_coding protein_coding MGP_129S1SvImJ_T0061930.1 MGP_129S1SvImJ_G0027449.1 mouse_genomes_project 3 90197814 90199864 - Atp8b2 protein_coding retained_intron MGP_129S1SvImJ_T0061931.1 MGP_129S1SvImJ_G0027449.1 mouse_genomes_project 3 90199288 90200573 - MGP_129S1SvImJ_P0061931 Atp8b2 protein_coding protein_coding MGP_129S1SvImJ_T0061932.1 MGP_129S1SvImJ_G0027449.1 mouse_genomes_project 3 90200140 90200656 - Atp8b2 protein_coding retained_intron MGP_129S1SvImJ_T0061933.1 MGP_129S1SvImJ_G0027449.1 mouse_genomes_project 3 90200536 90201452 - Atp8b2 protein_coding retained_intron MGP_129S1SvImJ_T0061934.1 MGP_129S1SvImJ_G0027449.1 mouse_genomes_project 3 90200563 90202503 - MGP_129S1SvImJ_P0061934 Atp8b2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0061935.1 MGP_129S1SvImJ_G0027449.1 mouse_genomes_project 3 90200627 90202633 - Atp8b2 protein_coding retained_intron MGP_129S1SvImJ_T0061936.1 MGP_129S1SvImJ_G0027449.1 mouse_genomes_project 3 90202645 90204554 - Atp8b2 protein_coding retained_intron MGP_129S1SvImJ_T0061937.1 MGP_129S1SvImJ_G0027449.1 mouse_genomes_project 3 90207939 90208740 - Atp8b2 protein_coding retained_intron MGP_129S1SvImJ_T0061938.1 MGP_129S1SvImJ_G0027449.1 mouse_genomes_project 3 90208370 90214860 - MGP_129S1SvImJ_P0061938 Atp8b2 protein_coding protein_coding MGP_129S1SvImJ_T0061939.1 MGP_129S1SvImJ_G0027449.1 mouse_genomes_project 3 90213312 90218420 - MGP_129S1SvImJ_P0061939 Atp8b2 protein_coding protein_coding MGP_129S1SvImJ_T0061940.1 MGP_129S1SvImJ_G0027449.1 mouse_genomes_project 3 90213859 90217121 - MGP_129S1SvImJ_P0061940 Atp8b2 protein_coding protein_coding MGP_129S1SvImJ_T0099796.1 MGP_129S1SvImJ_G0037863.1 mouse_genomes_project 3 141396303 141396462 + Gm23467 snRNA snRNA MGP_129S1SvImJ_T0062211.1 MGP_129S1SvImJ_G0027552.1 mouse_genomes_project 3 95040317 95051408 - MGP_129S1SvImJ_P0062211 Riiad1 protein_coding protein_coding MGP_129S1SvImJ_T0062212.1 MGP_129S1SvImJ_G0027552.1 mouse_genomes_project 3 95040319 95059351 - Riiad1 protein_coding processed_transcript MGP_129S1SvImJ_T0062213.1 MGP_129S1SvImJ_G0027552.1 mouse_genomes_project 3 95043117 95050739 - Riiad1 protein_coding processed_transcript MGP_129S1SvImJ_T0007624.1 MGP_129S1SvImJ_G0006236.1 mouse_genomes_project 3 90260171 90262737 + Gm19710 lincRNA lincRNA MGP_129S1SvImJ_T0007625.1 MGP_129S1SvImJ_G0006236.1 mouse_genomes_project 3 90262526 90284023 + Gm19710 lincRNA lincRNA MGP_129S1SvImJ_T0004378.1 MGP_129S1SvImJ_G0003828.1 mouse_genomes_project 3 125154476 125220249 - 4933405D12Rik antisense antisense MGP_129S1SvImJ_T0013967.1 MGP_129S1SvImJ_G0012056.1 mouse_genomes_project 3 16910004 16911055 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0060624.1 MGP_129S1SvImJ_G0027179.1 mouse_genomes_project 3 38707491 38720065 + MGP_129S1SvImJ_P0060624 Hspa4l protein_coding protein_coding MGP_129S1SvImJ_T0060625.1 MGP_129S1SvImJ_G0027179.1 mouse_genomes_project 3 38708377 38748260 + MGP_129S1SvImJ_P0060625 Hspa4l protein_coding protein_coding MGP_129S1SvImJ_T0060626.1 MGP_129S1SvImJ_G0027179.1 mouse_genomes_project 3 38708425 38762562 + MGP_129S1SvImJ_P0060626 Hspa4l protein_coding protein_coding MGP_129S1SvImJ_T0060627.1 MGP_129S1SvImJ_G0027179.1 mouse_genomes_project 3 38708479 38723829 + MGP_129S1SvImJ_P0060627 Hspa4l protein_coding protein_coding MGP_129S1SvImJ_T0060628.1 MGP_129S1SvImJ_G0027179.1 mouse_genomes_project 3 38708578 38721592 + Hspa4l protein_coding retained_intron MGP_129S1SvImJ_T0060629.1 MGP_129S1SvImJ_G0027179.1 mouse_genomes_project 3 38708863 38756247 + MGP_129S1SvImJ_P0060629 Hspa4l protein_coding protein_coding MGP_129S1SvImJ_T0060630.1 MGP_129S1SvImJ_G0027179.1 mouse_genomes_project 3 38735563 38748502 + Hspa4l protein_coding retained_intron MGP_129S1SvImJ_T0060631.1 MGP_129S1SvImJ_G0027179.1 mouse_genomes_project 3 38750669 38753480 + Hspa4l protein_coding retained_intron MGP_129S1SvImJ_T0064775.1 MGP_129S1SvImJ_G0028070.1 mouse_genomes_project 4 11776152 11976740 - MGP_129S1SvImJ_P0064775 Necab1 protein_coding protein_coding MGP_129S1SvImJ_T0064776.1 MGP_129S1SvImJ_G0028070.1 mouse_genomes_project 4 11778836 11977387 - MGP_129S1SvImJ_P0064776 Necab1 protein_coding protein_coding MGP_129S1SvImJ_T0064777.1 MGP_129S1SvImJ_G0028070.1 mouse_genomes_project 4 11937881 11976570 - Necab1 protein_coding processed_transcript MGP_129S1SvImJ_T0069844.1 MGP_129S1SvImJ_G0029231.1 mouse_genomes_project 4 160195793 160197254 + MGP_129S1SvImJ_P0069844 Aurkaip1 protein_coding protein_coding MGP_129S1SvImJ_T0069845.1 MGP_129S1SvImJ_G0029231.1 mouse_genomes_project 4 160195872 160197646 + MGP_129S1SvImJ_P0069845 Aurkaip1 protein_coding protein_coding MGP_129S1SvImJ_T0069846.1 MGP_129S1SvImJ_G0029231.1 mouse_genomes_project 4 160196134 160196980 + Aurkaip1 protein_coding retained_intron MGP_129S1SvImJ_T0069847.1 MGP_129S1SvImJ_G0029231.1 mouse_genomes_project 4 160196174 160197577 + MGP_129S1SvImJ_P0069847 Aurkaip1 protein_coding protein_coding MGP_129S1SvImJ_T0069848.1 MGP_129S1SvImJ_G0029231.1 mouse_genomes_project 4 160196180 160197044 + Aurkaip1 protein_coding processed_transcript MGP_129S1SvImJ_T0069849.1 MGP_129S1SvImJ_G0029231.1 mouse_genomes_project 4 160196184 160197547 + MGP_129S1SvImJ_P0069849 Aurkaip1 protein_coding protein_coding MGP_129S1SvImJ_T0069514.1 MGP_129S1SvImJ_G0029173.1 mouse_genomes_project 4 156220026 156251990 - MGP_129S1SvImJ_P0069514 Espn protein_coding protein_coding MGP_129S1SvImJ_T0069515.1 MGP_129S1SvImJ_G0029173.1 mouse_genomes_project 4 156220031 156252154 - MGP_129S1SvImJ_P0069515 Espn protein_coding protein_coding MGP_129S1SvImJ_T0069516.1 MGP_129S1SvImJ_G0029173.1 mouse_genomes_project 4 156220552 156228991 - MGP_129S1SvImJ_P0069516 Espn protein_coding protein_coding MGP_129S1SvImJ_T0069517.1 MGP_129S1SvImJ_G0029173.1 mouse_genomes_project 4 156220563 156252005 - MGP_129S1SvImJ_P0069517 Espn protein_coding protein_coding MGP_129S1SvImJ_T0069518.1 MGP_129S1SvImJ_G0029173.1 mouse_genomes_project 4 156220565 156231909 - MGP_129S1SvImJ_P0069518 Espn protein_coding protein_coding MGP_129S1SvImJ_T0069519.1 MGP_129S1SvImJ_G0029173.1 mouse_genomes_project 4 156220575 156232381 - Espn protein_coding processed_transcript MGP_129S1SvImJ_T0069520.1 MGP_129S1SvImJ_G0029173.1 mouse_genomes_project 4 156220814 156236371 - MGP_129S1SvImJ_P0069520 Espn protein_coding protein_coding MGP_129S1SvImJ_T0069521.1 MGP_129S1SvImJ_G0029173.1 mouse_genomes_project 4 156220814 156236328 - MGP_129S1SvImJ_P0069521 Espn protein_coding protein_coding MGP_129S1SvImJ_T0069522.1 MGP_129S1SvImJ_G0029173.1 mouse_genomes_project 4 156220814 156236371 - MGP_129S1SvImJ_P0069522 Espn protein_coding protein_coding MGP_129S1SvImJ_T0069523.1 MGP_129S1SvImJ_G0029173.1 mouse_genomes_project 4 156220814 156236328 - MGP_129S1SvImJ_P0069523 Espn protein_coding protein_coding MGP_129S1SvImJ_T0069524.1 MGP_129S1SvImJ_G0029173.1 mouse_genomes_project 4 156220814 156236328 - MGP_129S1SvImJ_P0069524 Espn protein_coding protein_coding MGP_129S1SvImJ_T0069525.1 MGP_129S1SvImJ_G0029173.1 mouse_genomes_project 4 156220814 156236371 - MGP_129S1SvImJ_P0069525 Espn protein_coding protein_coding MGP_129S1SvImJ_T0069526.1 MGP_129S1SvImJ_G0029173.1 mouse_genomes_project 4 156220814 156236371 - MGP_129S1SvImJ_P0069526 Espn protein_coding protein_coding MGP_129S1SvImJ_T0069527.1 MGP_129S1SvImJ_G0029173.1 mouse_genomes_project 4 156220814 156236328 - MGP_129S1SvImJ_P0069527 Espn protein_coding protein_coding MGP_129S1SvImJ_T0069528.1 MGP_129S1SvImJ_G0029173.1 mouse_genomes_project 4 156220825 156231885 - Espn protein_coding processed_transcript MGP_129S1SvImJ_T0069529.1 MGP_129S1SvImJ_G0029173.1 mouse_genomes_project 4 156222970 156231910 - Espn protein_coding processed_transcript MGP_129S1SvImJ_T0069530.1 MGP_129S1SvImJ_G0029173.1 mouse_genomes_project 4 156223785 156248828 - MGP_129S1SvImJ_P0069530 Espn protein_coding protein_coding MGP_129S1SvImJ_T0069531.1 MGP_129S1SvImJ_G0029173.1 mouse_genomes_project 4 156227859 156231901 - Espn protein_coding processed_transcript MGP_129S1SvImJ_T0069532.1 MGP_129S1SvImJ_G0029173.1 mouse_genomes_project 4 156228207 156231274 - Espn protein_coding processed_transcript MGP_129S1SvImJ_T0065687.1 MGP_129S1SvImJ_G0028278.1 mouse_genomes_project 4 47501165 47658030 + Plppr1 protein_coding retained_intron MGP_129S1SvImJ_T0065688.1 MGP_129S1SvImJ_G0028278.1 mouse_genomes_project 4 47501174 47785911 + MGP_129S1SvImJ_P0065688 Plppr1 protein_coding protein_coding MGP_129S1SvImJ_T0065689.1 MGP_129S1SvImJ_G0028278.1 mouse_genomes_project 4 47501366 47753614 + Plppr1 protein_coding retained_intron MGP_129S1SvImJ_T0069814.1 MGP_129S1SvImJ_G0029222.1 mouse_genomes_project 4 160046178 160048318 + MGP_129S1SvImJ_P0069814 Fndc10 protein_coding protein_coding MGP_129S1SvImJ_T0067754.1 MGP_129S1SvImJ_G0028770.1 mouse_genomes_project 4 127749789 127751751 + MGP_129S1SvImJ_P0067754 Lsm10 protein_coding protein_coding MGP_129S1SvImJ_T0067755.1 MGP_129S1SvImJ_G0028770.1 mouse_genomes_project 4 127749819 127751748 + MGP_129S1SvImJ_P0067755 Lsm10 protein_coding protein_coding MGP_129S1SvImJ_T0067756.1 MGP_129S1SvImJ_G0028770.1 mouse_genomes_project 4 127749826 127751299 + MGP_129S1SvImJ_P0067756 Lsm10 protein_coding protein_coding MGP_129S1SvImJ_T0067805.1 MGP_129S1SvImJ_G0028780.1 mouse_genomes_project 4 128008344 128028299 - MGP_129S1SvImJ_P0067805 Ago3 protein_coding protein_coding MGP_129S1SvImJ_T0067806.1 MGP_129S1SvImJ_G0028780.1 mouse_genomes_project 4 128009785 128111321 - MGP_129S1SvImJ_P0067806 Ago3 protein_coding protein_coding MGP_129S1SvImJ_T0067807.1 MGP_129S1SvImJ_G0028780.1 mouse_genomes_project 4 128022666 128028881 - MGP_129S1SvImJ_P0067807 Ago3 protein_coding protein_coding MGP_129S1SvImJ_T0067808.1 MGP_129S1SvImJ_G0028780.1 mouse_genomes_project 4 128052469 128081086 - Ago3 protein_coding processed_transcript MGP_129S1SvImJ_T0067809.1 MGP_129S1SvImJ_G0028780.1 mouse_genomes_project 4 128074742 128081127 - Ago3 protein_coding processed_transcript MGP_129S1SvImJ_T0067810.1 MGP_129S1SvImJ_G0028780.1 mouse_genomes_project 4 128084490 128111306 - Ago3 protein_coding processed_transcript MGP_129S1SvImJ_T0014842.1 MGP_129S1SvImJ_G0012931.1 mouse_genomes_project 4 151196801 151197256 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007800.1 MGP_129S1SvImJ_G0006378.1 mouse_genomes_project 4 149280 162352 - Gm26857 lincRNA lincRNA MGP_129S1SvImJ_T0099873.1 MGP_129S1SvImJ_G0037940.1 mouse_genomes_project 4 129031215 129031318 - Gm22221 snRNA snRNA MGP_129S1SvImJ_T0014696.1 MGP_129S1SvImJ_G0012785.1 mouse_genomes_project 4 99877199 99877905 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064866.1 MGP_129S1SvImJ_G0028098.1 mouse_genomes_project 4 21601972 21691020 + Mms22l protein_coding retained_intron MGP_129S1SvImJ_T0064867.1 MGP_129S1SvImJ_G0028098.1 mouse_genomes_project 4 21601972 21712644 + MGP_129S1SvImJ_P0064867 Mms22l protein_coding protein_coding MGP_129S1SvImJ_T0064868.1 MGP_129S1SvImJ_G0028098.1 mouse_genomes_project 4 21601983 21609053 + MGP_129S1SvImJ_P0064868 Mms22l protein_coding protein_coding MGP_129S1SvImJ_T0064869.1 MGP_129S1SvImJ_G0028098.1 mouse_genomes_project 4 21601986 21602566 + Mms22l protein_coding processed_transcript MGP_129S1SvImJ_T0064870.1 MGP_129S1SvImJ_G0028098.1 mouse_genomes_project 4 21602065 21712640 + MGP_129S1SvImJ_P0064870 Mms22l protein_coding protein_coding MGP_129S1SvImJ_T0064871.1 MGP_129S1SvImJ_G0028098.1 mouse_genomes_project 4 21603414 21636311 + MGP_129S1SvImJ_P0064871 Mms22l protein_coding protein_coding MGP_129S1SvImJ_T0064872.1 MGP_129S1SvImJ_G0028098.1 mouse_genomes_project 4 21612414 21712643 + Mms22l protein_coding retained_intron MGP_129S1SvImJ_T0064873.1 MGP_129S1SvImJ_G0028098.1 mouse_genomes_project 4 21614688 21709679 + MGP_129S1SvImJ_P0064873 Mms22l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064874.1 MGP_129S1SvImJ_G0028098.1 mouse_genomes_project 4 21643498 21683681 + MGP_129S1SvImJ_P0064874 Mms22l protein_coding protein_coding MGP_129S1SvImJ_T0064875.1 MGP_129S1SvImJ_G0028098.1 mouse_genomes_project 4 21687733 21700900 + Mms22l protein_coding processed_transcript MGP_129S1SvImJ_T0065952.1 MGP_129S1SvImJ_G0028355.1 mouse_genomes_project 4 61480279 61483548 - MGP_129S1SvImJ_P0065952 Hdhd3 protein_coding protein_coding MGP_129S1SvImJ_T0065953.1 MGP_129S1SvImJ_G0028355.1 mouse_genomes_project 4 61481214 61484739 - Hdhd3 protein_coding processed_transcript MGP_129S1SvImJ_T0007980.1 MGP_129S1SvImJ_G0006519.1 mouse_genomes_project 4 131938784 131941933 + 1700003M07Rik lincRNA lincRNA MGP_129S1SvImJ_T0007981.1 MGP_129S1SvImJ_G0006519.1 mouse_genomes_project 4 131939222 131942070 + 1700003M07Rik lincRNA lincRNA MGP_129S1SvImJ_T0068865.1 MGP_129S1SvImJ_G0029010.1 mouse_genomes_project 4 141869277 141883572 - MGP_129S1SvImJ_P0068865 Htr6 protein_coding protein_coding MGP_129S1SvImJ_T0068866.1 MGP_129S1SvImJ_G0029010.1 mouse_genomes_project 4 141869578 141882791 - MGP_129S1SvImJ_P0068866 Htr6 protein_coding protein_coding MGP_129S1SvImJ_T0007987.1 MGP_129S1SvImJ_G0006524.1 mouse_genomes_project 4 133564725 133583064 + Gm831 lincRNA lincRNA MGP_129S1SvImJ_T0068272.1 MGP_129S1SvImJ_G0028873.1 mouse_genomes_project 4 134695952 134698882 - MGP_129S1SvImJ_P0068272 Atpif1 protein_coding protein_coding MGP_129S1SvImJ_T0068273.1 MGP_129S1SvImJ_G0028873.1 mouse_genomes_project 4 134695952 134699053 - MGP_129S1SvImJ_P0068273 Atpif1 protein_coding protein_coding MGP_129S1SvImJ_T0068274.1 MGP_129S1SvImJ_G0028873.1 mouse_genomes_project 4 134697881 134698989 - Atpif1 protein_coding retained_intron MGP_129S1SvImJ_T0007914.1 MGP_129S1SvImJ_G0006474.1 mouse_genomes_project 4 101580592 101581575 + Gm12801 lincRNA lincRNA MGP_129S1SvImJ_T0065041.1 MGP_129S1SvImJ_G0028139.1 mouse_genomes_project 4 37283899 37285381 + MGP_129S1SvImJ_P0065041 1700009N14Rik protein_coding protein_coding MGP_129S1SvImJ_T0101099.1 MGP_129S1SvImJ_G0039166.1 mouse_genomes_project 4 31563030 31563117 + Gm22010 snoRNA snoRNA MGP_129S1SvImJ_T0068811.1 MGP_129S1SvImJ_G0028991.1 mouse_genomes_project 4 140965941 140981035 + MGP_129S1SvImJ_P0068811 Sh2d5 protein_coding protein_coding MGP_129S1SvImJ_T0068812.1 MGP_129S1SvImJ_G0028991.1 mouse_genomes_project 4 140969684 140976982 + MGP_129S1SvImJ_P0068812 Sh2d5 protein_coding protein_coding MGP_129S1SvImJ_T0068813.1 MGP_129S1SvImJ_G0028991.1 mouse_genomes_project 4 140969694 140975393 + Sh2d5 protein_coding processed_transcript MGP_129S1SvImJ_T0068815.1 MGP_129S1SvImJ_G0028991.1 mouse_genomes_project 4 140969735 140981035 + MGP_129S1SvImJ_P0068815 Sh2d5 protein_coding protein_coding MGP_129S1SvImJ_T0068816.1 MGP_129S1SvImJ_G0028991.1 mouse_genomes_project 4 140976437 140978814 + Sh2d5 protein_coding retained_intron MGP_129S1SvImJ_T0014754.1 MGP_129S1SvImJ_G0012843.1 mouse_genomes_project 4 118752645 118752960 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068716.1 MGP_129S1SvImJ_G0028972.1 mouse_genomes_project 4 139231648 139426440 - MGP_129S1SvImJ_P0068716 Ephb2 protein_coding protein_coding MGP_129S1SvImJ_T0068717.1 MGP_129S1SvImJ_G0028972.1 mouse_genomes_project 4 139237717 139426408 - MGP_129S1SvImJ_P0068717 Ephb2 protein_coding protein_coding MGP_129S1SvImJ_T0068718.1 MGP_129S1SvImJ_G0028972.1 mouse_genomes_project 4 139238755 139426264 - MGP_129S1SvImJ_P0068718 Ephb2 protein_coding protein_coding MGP_129S1SvImJ_T0068719.1 MGP_129S1SvImJ_G0028972.1 mouse_genomes_project 4 139243820 139245786 - Ephb2 protein_coding retained_intron MGP_129S1SvImJ_T0068720.1 MGP_129S1SvImJ_G0028972.1 mouse_genomes_project 4 139245596 139279514 - MGP_129S1SvImJ_P0068720 Ephb2 protein_coding protein_coding MGP_129S1SvImJ_T0068721.1 MGP_129S1SvImJ_G0028972.1 mouse_genomes_project 4 139357924 139426426 - Ephb2 protein_coding retained_intron MGP_129S1SvImJ_T0102551.1 MGP_129S1SvImJ_G0040384.1 mouse_genomes_project 4 147698084 147698545 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0004552.1 MGP_129S1SvImJ_G0003958.1 mouse_genomes_project 4 126668425 126670493 - Gm12932 antisense antisense MGP_129S1SvImJ_T0065163.1 MGP_129S1SvImJ_G0028171.1 mouse_genomes_project 4 39704426 39707292 - MGP_129S1SvImJ_P0065163 Sigmar1 protein_coding protein_coding MGP_129S1SvImJ_T0065164.1 MGP_129S1SvImJ_G0028171.1 mouse_genomes_project 4 39704426 39707292 - MGP_129S1SvImJ_P0065164 Sigmar1 protein_coding protein_coding MGP_129S1SvImJ_T0065165.1 MGP_129S1SvImJ_G0028171.1 mouse_genomes_project 4 39705033 39711010 - Sigmar1 protein_coding processed_transcript MGP_129S1SvImJ_T0065166.1 MGP_129S1SvImJ_G0028171.1 mouse_genomes_project 4 39705438 39722283 - Sigmar1 protein_coding processed_transcript MGP_129S1SvImJ_T0065167.1 MGP_129S1SvImJ_G0028171.1 mouse_genomes_project 4 39706381 39707119 - Sigmar1 protein_coding retained_intron MGP_129S1SvImJ_T0065168.1 MGP_129S1SvImJ_G0028171.1 mouse_genomes_project 4 39706513 39706981 - Sigmar1 protein_coding retained_intron MGP_129S1SvImJ_T0065169.1 MGP_129S1SvImJ_G0028171.1 mouse_genomes_project 4 39706535 39707253 - Sigmar1 protein_coding processed_transcript MGP_129S1SvImJ_T0065170.1 MGP_129S1SvImJ_G0028171.1 mouse_genomes_project 4 39721711 39723041 - Sigmar1 protein_coding processed_transcript MGP_129S1SvImJ_T0066489.1 MGP_129S1SvImJ_G0028485.1 mouse_genomes_project 4 100171914 100232552 + MGP_129S1SvImJ_P0066489 Pgm2 protein_coding protein_coding MGP_129S1SvImJ_T0066490.1 MGP_129S1SvImJ_G0028485.1 mouse_genomes_project 4 100199438 100232552 + MGP_129S1SvImJ_P0066490 Pgm2 protein_coding protein_coding MGP_129S1SvImJ_T0065482.1 MGP_129S1SvImJ_G0028234.1 mouse_genomes_project 4 42471362 42532311 + MGP_129S1SvImJ_P0065482 Melk protein_coding protein_coding MGP_129S1SvImJ_T0065483.1 MGP_129S1SvImJ_G0028234.1 mouse_genomes_project 4 42473151 42496726 + MGP_129S1SvImJ_P0065483 Melk protein_coding protein_coding MGP_129S1SvImJ_T0065484.1 MGP_129S1SvImJ_G0028234.1 mouse_genomes_project 4 42474052 42495301 + Melk protein_coding processed_transcript MGP_129S1SvImJ_T0065485.1 MGP_129S1SvImJ_G0028234.1 mouse_genomes_project 4 42474052 42489103 + MGP_129S1SvImJ_P0065485 Melk protein_coding protein_coding MGP_129S1SvImJ_T0101157.1 MGP_129S1SvImJ_G0039224.1 mouse_genomes_project 4 132782541 132782614 + Snord85 snoRNA snoRNA MGP_129S1SvImJ_T0064710.1 MGP_129S1SvImJ_G0028052.1 mouse_genomes_project 4 7989326 8043928 - MGP_129S1SvImJ_P0064710 Esrp1 protein_coding protein_coding MGP_129S1SvImJ_T0064711.1 MGP_129S1SvImJ_G0028052.1 mouse_genomes_project 4 7989326 8043824 - MGP_129S1SvImJ_P0064711 Esrp1 protein_coding protein_coding MGP_129S1SvImJ_T0064712.1 MGP_129S1SvImJ_G0028052.1 mouse_genomes_project 4 7989431 8043928 - MGP_129S1SvImJ_P0064712 Esrp1 protein_coding protein_coding MGP_129S1SvImJ_T0064713.1 MGP_129S1SvImJ_G0028052.1 mouse_genomes_project 4 7990398 8043824 - MGP_129S1SvImJ_P0064713 Esrp1 protein_coding protein_coding MGP_129S1SvImJ_T0064714.1 MGP_129S1SvImJ_G0028052.1 mouse_genomes_project 4 7990398 8024368 - MGP_129S1SvImJ_P0064714 Esrp1 protein_coding protein_coding MGP_129S1SvImJ_T0064715.1 MGP_129S1SvImJ_G0028052.1 mouse_genomes_project 4 7998007 8001511 - Esrp1 protein_coding processed_transcript MGP_129S1SvImJ_T0064716.1 MGP_129S1SvImJ_G0028052.1 mouse_genomes_project 4 8014846 8043539 - MGP_129S1SvImJ_P0064716 Esrp1 protein_coding protein_coding MGP_129S1SvImJ_T0064792.1 MGP_129S1SvImJ_G0028076.1 mouse_genomes_project 4 13009780 13059001 - MGP_129S1SvImJ_P0064792 Ripk2 protein_coding protein_coding MGP_129S1SvImJ_T0064793.1 MGP_129S1SvImJ_G0028076.1 mouse_genomes_project 4 13009788 13058997 - MGP_129S1SvImJ_P0064793 Ripk2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067446.1 MGP_129S1SvImJ_G0028689.1 mouse_genomes_project 4 120357792 120373943 - MGP_129S1SvImJ_P0067446 protein_coding protein_coding MGP_129S1SvImJ_T0067447.1 MGP_129S1SvImJ_G0028689.1 mouse_genomes_project 4 120357926 120373908 - MGP_129S1SvImJ_P0067447 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067448.1 MGP_129S1SvImJ_G0028689.1 mouse_genomes_project 4 120359907 120373908 - protein_coding retained_intron MGP_129S1SvImJ_T0067449.1 MGP_129S1SvImJ_G0028689.1 mouse_genomes_project 4 120360915 120373888 - protein_coding processed_transcript MGP_129S1SvImJ_T0067450.1 MGP_129S1SvImJ_G0028689.1 mouse_genomes_project 4 120368049 120372679 - MGP_129S1SvImJ_P0067450 protein_coding protein_coding MGP_129S1SvImJ_T0067451.1 MGP_129S1SvImJ_G0028689.1 mouse_genomes_project 4 120368110 120373883 - MGP_129S1SvImJ_P0067451 protein_coding protein_coding MGP_129S1SvImJ_T0067452.1 MGP_129S1SvImJ_G0028689.1 mouse_genomes_project 4 120371126 120373928 - MGP_129S1SvImJ_P0067452 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067453.1 MGP_129S1SvImJ_G0028689.1 mouse_genomes_project 4 120371259 120373925 - MGP_129S1SvImJ_P0067453 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067454.1 MGP_129S1SvImJ_G0028689.1 mouse_genomes_project 4 120371267 120373943 - MGP_129S1SvImJ_P0067454 protein_coding protein_coding MGP_129S1SvImJ_T0069050.1 MGP_129S1SvImJ_G0029051.1 mouse_genomes_project 4 144694964 144701838 - MGP_129S1SvImJ_P0069050 Tmem82 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069051.1 MGP_129S1SvImJ_G0029051.1 mouse_genomes_project 4 144695824 144699779 - MGP_129S1SvImJ_P0069051 Tmem82 protein_coding protein_coding MGP_129S1SvImJ_T0069052.1 MGP_129S1SvImJ_G0029051.1 mouse_genomes_project 4 144695828 144699522 - Tmem82 protein_coding retained_intron MGP_129S1SvImJ_T0064831.1 MGP_129S1SvImJ_G0028091.1 mouse_genomes_project 4 18777528 18786602 - MGP_129S1SvImJ_P0064831 Tstd3 protein_coding protein_coding MGP_129S1SvImJ_T0066616.1 MGP_129S1SvImJ_G0028511.1 mouse_genomes_project 4 105337908 105372211 - C8a protein_coding processed_transcript MGP_129S1SvImJ_T0066617.1 MGP_129S1SvImJ_G0028511.1 mouse_genomes_project 4 105337908 105392363 - MGP_129S1SvImJ_P0066617 C8a protein_coding protein_coding MGP_129S1SvImJ_T0066618.1 MGP_129S1SvImJ_G0028511.1 mouse_genomes_project 4 105337910 105392321 - MGP_129S1SvImJ_P0066618 C8a protein_coding protein_coding MGP_129S1SvImJ_T0014851.1 MGP_129S1SvImJ_G0012940.1 mouse_genomes_project 4 153701727 153701868 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010625.1 MGP_129S1SvImJ_G0008741.1 mouse_genomes_project 4 99921895 99921984 + Gm23366 miRNA miRNA MGP_129S1SvImJ_T0067341.1 MGP_129S1SvImJ_G0028658.1 mouse_genomes_project 4 118888731 118891736 - MGP_129S1SvImJ_P0067341 Atp6v0b protein_coding protein_coding MGP_129S1SvImJ_T0067342.1 MGP_129S1SvImJ_G0028658.1 mouse_genomes_project 4 118888735 118890300 - Atp6v0b protein_coding retained_intron MGP_129S1SvImJ_T0067343.1 MGP_129S1SvImJ_G0028658.1 mouse_genomes_project 4 118888738 118891727 - MGP_129S1SvImJ_P0067343 Atp6v0b protein_coding protein_coding MGP_129S1SvImJ_T0067344.1 MGP_129S1SvImJ_G0028658.1 mouse_genomes_project 4 118888850 118890206 - Atp6v0b protein_coding retained_intron MGP_129S1SvImJ_T0067345.1 MGP_129S1SvImJ_G0028658.1 mouse_genomes_project 4 118889569 118891042 - Atp6v0b protein_coding retained_intron MGP_129S1SvImJ_T0067346.1 MGP_129S1SvImJ_G0028658.1 mouse_genomes_project 4 118889636 118890964 - MGP_129S1SvImJ_P0067346 Atp6v0b protein_coding protein_coding MGP_129S1SvImJ_T0067347.1 MGP_129S1SvImJ_G0028658.1 mouse_genomes_project 4 118890040 118891694 - MGP_129S1SvImJ_P0067347 Atp6v0b protein_coding protein_coding MGP_129S1SvImJ_T0067348.1 MGP_129S1SvImJ_G0028658.1 mouse_genomes_project 4 118890686 118891740 - MGP_129S1SvImJ_P0067348 Atp6v0b protein_coding protein_coding MGP_129S1SvImJ_T0067349.1 MGP_129S1SvImJ_G0028658.1 mouse_genomes_project 4 118890727 118891734 - MGP_129S1SvImJ_P0067349 Atp6v0b protein_coding protein_coding MGP_129S1SvImJ_T0010636.1 MGP_129S1SvImJ_G0008752.1 mouse_genomes_project 4 122273020 122273084 - Mir7015 miRNA miRNA MGP_129S1SvImJ_T0066040.1 MGP_129S1SvImJ_G0028379.1 mouse_genomes_project 4 65942017 65957234 + MGP_129S1SvImJ_P0066040 Tlr4 protein_coding protein_coding MGP_129S1SvImJ_T0066041.1 MGP_129S1SvImJ_G0028379.1 mouse_genomes_project 4 65942046 66043001 + MGP_129S1SvImJ_P0066041 Tlr4 protein_coding protein_coding MGP_129S1SvImJ_T0066042.1 MGP_129S1SvImJ_G0028379.1 mouse_genomes_project 4 65942052 65953863 + Tlr4 protein_coding processed_transcript MGP_129S1SvImJ_T0066043.1 MGP_129S1SvImJ_G0028379.1 mouse_genomes_project 4 65942635 65954052 + Tlr4 protein_coding processed_transcript MGP_129S1SvImJ_T0010610.1 MGP_129S1SvImJ_G0008726.1 mouse_genomes_project 4 46631400 46631497 - Mir1958 miRNA miRNA MGP_129S1SvImJ_T0068207.1 MGP_129S1SvImJ_G0028860.1 mouse_genomes_project 4 134036907 134038277 + MGP_129S1SvImJ_P0068207 Tmem200b protein_coding protein_coding MGP_129S1SvImJ_T0007964.1 MGP_129S1SvImJ_G0006508.1 mouse_genomes_project 4 129233965 129235958 + 4930471C06Rik lincRNA lincRNA MGP_129S1SvImJ_T0007965.1 MGP_129S1SvImJ_G0006508.1 mouse_genomes_project 4 129234051 129235958 + 4930471C06Rik lincRNA lincRNA MGP_129S1SvImJ_T0010614.1 MGP_129S1SvImJ_G0008730.1 mouse_genomes_project 4 66770299 66770370 + Gm44497 miRNA miRNA MGP_129S1SvImJ_T0004465.1 MGP_129S1SvImJ_G0003893.1 mouse_genomes_project 4 42850201 42871064 + Gm12462 antisense antisense MGP_129S1SvImJ_T0069406.1 MGP_129S1SvImJ_G0029153.1 mouse_genomes_project 4 154187545 154195112 + MGP_129S1SvImJ_P0069406 Eno1 protein_coding protein_coding MGP_129S1SvImJ_T0069407.1 MGP_129S1SvImJ_G0029153.1 mouse_genomes_project 4 154187776 154201440 + MGP_129S1SvImJ_P0069407 Eno1 protein_coding protein_coding MGP_129S1SvImJ_T0069408.1 MGP_129S1SvImJ_G0029153.1 mouse_genomes_project 4 154188064 154193548 + Eno1 protein_coding retained_intron MGP_129S1SvImJ_T0069409.1 MGP_129S1SvImJ_G0029153.1 mouse_genomes_project 4 154188064 154196172 + MGP_129S1SvImJ_P0069409 Eno1 protein_coding protein_coding MGP_129S1SvImJ_T0069410.1 MGP_129S1SvImJ_G0029153.1 mouse_genomes_project 4 154188067 154190759 + Eno1 protein_coding retained_intron MGP_129S1SvImJ_T0069411.1 MGP_129S1SvImJ_G0029153.1 mouse_genomes_project 4 154188524 154192963 + MGP_129S1SvImJ_P0069411 Eno1 protein_coding protein_coding MGP_129S1SvImJ_T0069412.1 MGP_129S1SvImJ_G0029153.1 mouse_genomes_project 4 154194304 154201434 + MGP_129S1SvImJ_P0069412 Eno1 protein_coding protein_coding MGP_129S1SvImJ_T0069413.1 MGP_129S1SvImJ_G0029153.1 mouse_genomes_project 4 154195057 154197716 + Eno1 protein_coding retained_intron MGP_129S1SvImJ_T0069414.1 MGP_129S1SvImJ_G0029153.1 mouse_genomes_project 4 154197234 154198381 + Eno1 protein_coding retained_intron MGP_129S1SvImJ_T0069415.1 MGP_129S1SvImJ_G0029153.1 mouse_genomes_project 4 154198283 154199111 + Eno1 protein_coding retained_intron MGP_129S1SvImJ_T0069416.1 MGP_129S1SvImJ_G0029153.1 mouse_genomes_project 4 154198388 154199453 + Eno1 protein_coding retained_intron MGP_129S1SvImJ_T0066960.1 MGP_129S1SvImJ_G0028577.1 mouse_genomes_project 4 111195393 111782662 + MGP_129S1SvImJ_P0066960 Agbl4 protein_coding protein_coding MGP_129S1SvImJ_T0066961.1 MGP_129S1SvImJ_G0028577.1 mouse_genomes_project 4 111195430 112519871 + MGP_129S1SvImJ_P0066961 Agbl4 protein_coding protein_coding MGP_129S1SvImJ_T0066962.1 MGP_129S1SvImJ_G0028577.1 mouse_genomes_project 4 111195430 112416869 + MGP_129S1SvImJ_P0066962 Agbl4 protein_coding protein_coding MGP_129S1SvImJ_T0066963.1 MGP_129S1SvImJ_G0028577.1 mouse_genomes_project 4 111195430 111458728 + MGP_129S1SvImJ_P0066963 Agbl4 protein_coding protein_coding MGP_129S1SvImJ_T0066964.1 MGP_129S1SvImJ_G0028577.1 mouse_genomes_project 4 111195523 112513151 + MGP_129S1SvImJ_P0066964 Agbl4 protein_coding protein_coding MGP_129S1SvImJ_T0066965.1 MGP_129S1SvImJ_G0028577.1 mouse_genomes_project 4 111195523 112513151 + MGP_129S1SvImJ_P0066965 Agbl4 protein_coding protein_coding MGP_129S1SvImJ_T0066966.1 MGP_129S1SvImJ_G0028577.1 mouse_genomes_project 4 111958213 112104325 + Agbl4 protein_coding processed_transcript MGP_129S1SvImJ_T0066967.1 MGP_129S1SvImJ_G0028577.1 mouse_genomes_project 4 111958283 112471879 + MGP_129S1SvImJ_P0066967 Agbl4 protein_coding protein_coding MGP_129S1SvImJ_T0066974.1 MGP_129S1SvImJ_G0028577.1 mouse_genomes_project 4 112416553 112512210 + Agbl4 protein_coding processed_transcript MGP_129S1SvImJ_T0066975.1 MGP_129S1SvImJ_G0028577.1 mouse_genomes_project 4 112416583 112513148 + Agbl4 protein_coding processed_transcript MGP_129S1SvImJ_T0065962.1 MGP_129S1SvImJ_G0028359.1 mouse_genomes_project 4 61552411 61649472 + MGP_129S1SvImJ_P0065962 Rgs3 protein_coding protein_coding MGP_129S1SvImJ_T0065963.1 MGP_129S1SvImJ_G0028359.1 mouse_genomes_project 4 61571469 61647071 + MGP_129S1SvImJ_P0065963 Rgs3 protein_coding protein_coding MGP_129S1SvImJ_T0065964.1 MGP_129S1SvImJ_G0028359.1 mouse_genomes_project 4 61594108 61613537 + Rgs3 protein_coding processed_transcript MGP_129S1SvImJ_T0065965.1 MGP_129S1SvImJ_G0028359.1 mouse_genomes_project 4 61609162 61695256 + MGP_129S1SvImJ_P0065965 Rgs3 protein_coding protein_coding MGP_129S1SvImJ_T0065966.1 MGP_129S1SvImJ_G0028359.1 mouse_genomes_project 4 61609224 61649472 + MGP_129S1SvImJ_P0065966 Rgs3 protein_coding protein_coding MGP_129S1SvImJ_T0065967.1 MGP_129S1SvImJ_G0028359.1 mouse_genomes_project 4 61613151 61620921 + Rgs3 protein_coding processed_transcript MGP_129S1SvImJ_T0065968.1 MGP_129S1SvImJ_G0028359.1 mouse_genomes_project 4 61613329 61616139 + Rgs3 protein_coding retained_intron MGP_129S1SvImJ_T0065969.1 MGP_129S1SvImJ_G0028359.1 mouse_genomes_project 4 61624043 61695256 + Rgs3 protein_coding retained_intron MGP_129S1SvImJ_T0065970.1 MGP_129S1SvImJ_G0028359.1 mouse_genomes_project 4 61624043 61689207 + Rgs3 protein_coding retained_intron MGP_129S1SvImJ_T0065971.1 MGP_129S1SvImJ_G0028359.1 mouse_genomes_project 4 61642201 61649472 + Rgs3 protein_coding retained_intron MGP_129S1SvImJ_T0065972.1 MGP_129S1SvImJ_G0028359.1 mouse_genomes_project 4 61653241 61679579 + MGP_129S1SvImJ_P0065972 Rgs3 protein_coding protein_coding MGP_129S1SvImJ_T0065973.1 MGP_129S1SvImJ_G0028359.1 mouse_genomes_project 4 61658512 61680490 + MGP_129S1SvImJ_P0065973 Rgs3 protein_coding protein_coding MGP_129S1SvImJ_T0065974.1 MGP_129S1SvImJ_G0028359.1 mouse_genomes_project 4 61663634 61695256 + MGP_129S1SvImJ_P0065974 Rgs3 protein_coding protein_coding MGP_129S1SvImJ_T0065975.1 MGP_129S1SvImJ_G0028359.1 mouse_genomes_project 4 61663948 61679680 + Rgs3 protein_coding processed_transcript MGP_129S1SvImJ_T0065976.1 MGP_129S1SvImJ_G0028359.1 mouse_genomes_project 4 61690966 61692440 + Rgs3 protein_coding processed_transcript MGP_129S1SvImJ_T0068677.1 MGP_129S1SvImJ_G0028964.1 mouse_genomes_project 4 138823467 138831108 + MGP_129S1SvImJ_P0068677 Zfp46 protein_coding protein_coding MGP_129S1SvImJ_T0068678.1 MGP_129S1SvImJ_G0028964.1 mouse_genomes_project 4 138823559 138830865 + MGP_129S1SvImJ_P0068678 Zfp46 protein_coding protein_coding MGP_129S1SvImJ_T0068679.1 MGP_129S1SvImJ_G0028964.1 mouse_genomes_project 4 138823853 138825265 + Zfp46 protein_coding processed_transcript MGP_129S1SvImJ_T0068680.1 MGP_129S1SvImJ_G0028964.1 mouse_genomes_project 4 138824856 138836597 + MGP_129S1SvImJ_P0068680 Zfp46 protein_coding protein_coding MGP_129S1SvImJ_T0068681.1 MGP_129S1SvImJ_G0028964.1 mouse_genomes_project 4 138824893 138831029 + MGP_129S1SvImJ_P0068681 Zfp46 protein_coding protein_coding MGP_129S1SvImJ_T0069350.1 MGP_129S1SvImJ_G0029141.1 mouse_genomes_project 4 153333248 153336277 + MGP_129S1SvImJ_P0069350 Lzic protein_coding protein_coding MGP_129S1SvImJ_T0069351.1 MGP_129S1SvImJ_G0029141.1 mouse_genomes_project 4 153333250 153336305 + MGP_129S1SvImJ_P0069351 Lzic protein_coding protein_coding MGP_129S1SvImJ_T0069352.1 MGP_129S1SvImJ_G0029141.1 mouse_genomes_project 4 153333259 153333761 + Lzic protein_coding processed_transcript MGP_129S1SvImJ_T0069353.1 MGP_129S1SvImJ_G0029141.1 mouse_genomes_project 4 153333313 153346269 + MGP_129S1SvImJ_P0069353 Lzic protein_coding protein_coding MGP_129S1SvImJ_T0069354.1 MGP_129S1SvImJ_G0029141.1 mouse_genomes_project 4 153333352 153334023 + Lzic protein_coding processed_transcript MGP_129S1SvImJ_T0064595.1 MGP_129S1SvImJ_G0028032.1 mouse_genomes_project 4 2169403 2320782 + Fam110b protein_coding processed_transcript MGP_129S1SvImJ_T0064596.1 MGP_129S1SvImJ_G0028032.1 mouse_genomes_project 4 2169434 2323501 + MGP_129S1SvImJ_P0064596 Fam110b protein_coding protein_coding MGP_129S1SvImJ_T0064597.1 MGP_129S1SvImJ_G0028032.1 mouse_genomes_project 4 2169438 2258295 + Fam110b protein_coding retained_intron MGP_129S1SvImJ_T0064598.1 MGP_129S1SvImJ_G0028032.1 mouse_genomes_project 4 2169503 2320894 + Fam110b protein_coding processed_transcript MGP_129S1SvImJ_T0064599.1 MGP_129S1SvImJ_G0028032.1 mouse_genomes_project 4 2169548 2644064 + Fam110b protein_coding processed_transcript MGP_129S1SvImJ_T0064600.1 MGP_129S1SvImJ_G0028032.1 mouse_genomes_project 4 2244649 2323501 + MGP_129S1SvImJ_P0064600 Fam110b protein_coding protein_coding MGP_129S1SvImJ_T0064601.1 MGP_129S1SvImJ_G0028032.1 mouse_genomes_project 4 2295406 2321245 + MGP_129S1SvImJ_P0064601 Fam110b protein_coding protein_coding MGP_129S1SvImJ_T0064602.1 MGP_129S1SvImJ_G0028032.1 mouse_genomes_project 4 2295406 2322346 + MGP_129S1SvImJ_P0064602 Fam110b protein_coding protein_coding MGP_129S1SvImJ_T0064603.1 MGP_129S1SvImJ_G0028032.1 mouse_genomes_project 4 2320483 2320931 + Fam110b protein_coding processed_transcript MGP_129S1SvImJ_T0014453.1 MGP_129S1SvImJ_G0012542.1 mouse_genomes_project 4 15971829 15972767 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069017.1 MGP_129S1SvImJ_G0029046.1 mouse_genomes_project 4 144460784 144472156 - MGP_129S1SvImJ_P0069017 Clcnkb protein_coding protein_coding MGP_129S1SvImJ_T0069018.1 MGP_129S1SvImJ_G0029046.1 mouse_genomes_project 4 144460784 144472156 - MGP_129S1SvImJ_P0069018 Clcnkb protein_coding protein_coding MGP_129S1SvImJ_T0069019.1 MGP_129S1SvImJ_G0029046.1 mouse_genomes_project 4 144460784 144461804 - MGP_129S1SvImJ_P0069019 Clcnkb protein_coding protein_coding MGP_129S1SvImJ_T0069020.1 MGP_129S1SvImJ_G0029046.1 mouse_genomes_project 4 144470441 144472103 - Clcnkb protein_coding processed_transcript MGP_129S1SvImJ_T0014733.1 MGP_129S1SvImJ_G0012822.1 mouse_genomes_project 4 112132663 112133662 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069300.1 MGP_129S1SvImJ_G0029132.1 mouse_genomes_project 4 152742015 152904193 - MGP_129S1SvImJ_P0069300 Pex14 protein_coding protein_coding MGP_129S1SvImJ_T0069301.1 MGP_129S1SvImJ_G0029132.1 mouse_genomes_project 4 152744716 152904133 - Pex14 protein_coding retained_intron MGP_129S1SvImJ_T0069302.1 MGP_129S1SvImJ_G0029132.1 mouse_genomes_project 4 152775552 152904132 - Pex14 protein_coding processed_transcript MGP_129S1SvImJ_T0069303.1 MGP_129S1SvImJ_G0029132.1 mouse_genomes_project 4 152776303 152904126 - MGP_129S1SvImJ_P0069303 Pex14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069304.1 MGP_129S1SvImJ_G0029132.1 mouse_genomes_project 4 152809763 152904145 - Pex14 protein_coding processed_transcript MGP_129S1SvImJ_T0014649.1 MGP_129S1SvImJ_G0012738.1 mouse_genomes_project 4 83202525 83202988 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066728.1 MGP_129S1SvImJ_G0028537.1 mouse_genomes_project 4 107976165 107992336 - MGP_129S1SvImJ_P0066728 Dio1 protein_coding protein_coding MGP_129S1SvImJ_T0066729.1 MGP_129S1SvImJ_G0028537.1 mouse_genomes_project 4 107976867 107992309 - MGP_129S1SvImJ_P0066729 Dio1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066730.1 MGP_129S1SvImJ_G0028537.1 mouse_genomes_project 4 107977034 107992291 - MGP_129S1SvImJ_P0066730 Dio1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066731.1 MGP_129S1SvImJ_G0028537.1 mouse_genomes_project 4 107977038 107992291 - MGP_129S1SvImJ_P0066731 Dio1 protein_coding protein_coding MGP_129S1SvImJ_T0066732.1 MGP_129S1SvImJ_G0028537.1 mouse_genomes_project 4 107977068 107992285 - MGP_129S1SvImJ_P0066732 Dio1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066733.1 MGP_129S1SvImJ_G0028537.1 mouse_genomes_project 4 107977068 107992285 - MGP_129S1SvImJ_P0066733 Dio1 protein_coding protein_coding MGP_129S1SvImJ_T0066734.1 MGP_129S1SvImJ_G0028537.1 mouse_genomes_project 4 107977068 107992285 - MGP_129S1SvImJ_P0066734 Dio1 protein_coding protein_coding MGP_129S1SvImJ_T0066735.1 MGP_129S1SvImJ_G0028537.1 mouse_genomes_project 4 107985102 107992233 - Dio1 protein_coding processed_transcript MGP_129S1SvImJ_T0101139.1 MGP_129S1SvImJ_G0039206.1 mouse_genomes_project 4 94543802 94543903 + Gm22804 snoRNA snoRNA MGP_129S1SvImJ_T0066047.1 MGP_129S1SvImJ_G0028381.1 mouse_genomes_project 4 69410952 69605627 - MGP_129S1SvImJ_P0066047 Cdk5rap2 protein_coding protein_coding MGP_129S1SvImJ_T0066048.1 MGP_129S1SvImJ_G0028381.1 mouse_genomes_project 4 69417720 69605602 - MGP_129S1SvImJ_P0066048 Cdk5rap2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066049.1 MGP_129S1SvImJ_G0028381.1 mouse_genomes_project 4 69433041 69459327 - MGP_129S1SvImJ_P0066049 Cdk5rap2 protein_coding protein_coding MGP_129S1SvImJ_T0066050.1 MGP_129S1SvImJ_G0028381.1 mouse_genomes_project 4 69437163 69438545 - Cdk5rap2 protein_coding processed_transcript MGP_129S1SvImJ_T0066051.1 MGP_129S1SvImJ_G0028381.1 mouse_genomes_project 4 69592679 69597307 - Cdk5rap2 protein_coding processed_transcript MGP_129S1SvImJ_T0069792.1 MGP_129S1SvImJ_G0029218.1 mouse_genomes_project 4 159957357 159994808 - MGP_129S1SvImJ_P0069792 Gm10563 protein_coding protein_coding MGP_129S1SvImJ_T0007939.1 MGP_129S1SvImJ_G0006491.1 mouse_genomes_project 4 115424223 115424867 - Gm28864 lincRNA lincRNA MGP_129S1SvImJ_T0069293.1 MGP_129S1SvImJ_G0029130.1 mouse_genomes_project 4 152391776 152421042 + MGP_129S1SvImJ_P0069293 Gm572 protein_coding protein_coding MGP_129S1SvImJ_T0068549.1 MGP_129S1SvImJ_G0028936.1 mouse_genomes_project 4 137284905 137304643 - MGP_129S1SvImJ_P0068549 Tmem50a protein_coding protein_coding MGP_129S1SvImJ_T0068550.1 MGP_129S1SvImJ_G0028936.1 mouse_genomes_project 4 137285447 137304634 - MGP_129S1SvImJ_P0068550 Tmem50a protein_coding protein_coding MGP_129S1SvImJ_T0098364.1 MGP_129S1SvImJ_G0036449.1 mouse_genomes_project 4 125387874 125389388 - pseudogene pseudogene MGP_129S1SvImJ_T0014571.1 MGP_129S1SvImJ_G0012660.1 mouse_genomes_project 4 52305243 52306292 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069661.1 MGP_129S1SvImJ_G0029196.1 mouse_genomes_project 4 158583721 158921739 - protein_coding processed_transcript MGP_129S1SvImJ_T0069662.1 MGP_129S1SvImJ_G0029196.1 mouse_genomes_project 4 158583721 158921739 - MGP_129S1SvImJ_P0069662 protein_coding protein_coding MGP_129S1SvImJ_T0069663.1 MGP_129S1SvImJ_G0029196.1 mouse_genomes_project 4 158583721 158921739 - MGP_129S1SvImJ_P0069663 protein_coding protein_coding MGP_129S1SvImJ_T0069664.1 MGP_129S1SvImJ_G0029196.1 mouse_genomes_project 4 158583721 158921739 - MGP_129S1SvImJ_P0069664 protein_coding protein_coding MGP_129S1SvImJ_T0069665.1 MGP_129S1SvImJ_G0029196.1 mouse_genomes_project 4 158583721 158921739 - MGP_129S1SvImJ_P0069665 protein_coding protein_coding MGP_129S1SvImJ_T0069666.1 MGP_129S1SvImJ_G0029196.1 mouse_genomes_project 4 158583721 158921739 - MGP_129S1SvImJ_P0069666 protein_coding protein_coding MGP_129S1SvImJ_T0069667.1 MGP_129S1SvImJ_G0029196.1 mouse_genomes_project 4 158583721 158921739 - MGP_129S1SvImJ_P0069667 protein_coding protein_coding MGP_129S1SvImJ_T0069668.1 MGP_129S1SvImJ_G0029196.1 mouse_genomes_project 4 158590925 158602764 - protein_coding processed_transcript MGP_129S1SvImJ_T0069669.1 MGP_129S1SvImJ_G0029196.1 mouse_genomes_project 4 158596156 158602834 - protein_coding processed_transcript MGP_129S1SvImJ_T0069671.1 MGP_129S1SvImJ_G0029196.1 mouse_genomes_project 4 158614032 158616351 - protein_coding processed_transcript MGP_129S1SvImJ_T0069672.1 MGP_129S1SvImJ_G0029196.1 mouse_genomes_project 4 158623187 158921746 - MGP_129S1SvImJ_P0069672 protein_coding protein_coding MGP_129S1SvImJ_T0069673.1 MGP_129S1SvImJ_G0029196.1 mouse_genomes_project 4 158750232 158805809 - protein_coding processed_transcript MGP_129S1SvImJ_T0065122.1 MGP_129S1SvImJ_G0028160.1 mouse_genomes_project 4 39336369 39413453 - MGP_129S1SvImJ_P0065122 Kif24 protein_coding protein_coding MGP_129S1SvImJ_T0065123.1 MGP_129S1SvImJ_G0028160.1 mouse_genomes_project 4 39337235 39413461 - MGP_129S1SvImJ_P0065123 Kif24 protein_coding protein_coding MGP_129S1SvImJ_T0065124.1 MGP_129S1SvImJ_G0028160.1 mouse_genomes_project 4 39340809 39357433 - Kif24 protein_coding processed_transcript MGP_129S1SvImJ_T0065125.1 MGP_129S1SvImJ_G0028160.1 mouse_genomes_project 4 39349232 39350718 - Kif24 protein_coding processed_transcript MGP_129S1SvImJ_T0065126.1 MGP_129S1SvImJ_G0028160.1 mouse_genomes_project 4 39361202 39413453 - Kif24 protein_coding processed_transcript MGP_129S1SvImJ_T0065127.1 MGP_129S1SvImJ_G0028160.1 mouse_genomes_project 4 39376977 39413459 - MGP_129S1SvImJ_P0065127 Kif24 protein_coding protein_coding MGP_129S1SvImJ_T0065128.1 MGP_129S1SvImJ_G0028160.1 mouse_genomes_project 4 39395745 39413459 - Kif24 protein_coding processed_transcript MGP_129S1SvImJ_T0011588.1 MGP_129S1SvImJ_G0009704.1 mouse_genomes_project 4 53149463 53149705 + Gm25687 misc_RNA misc_RNA MGP_129S1SvImJ_T0014786.1 MGP_129S1SvImJ_G0012875.1 mouse_genomes_project 4 126596170 126596494 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101119.1 MGP_129S1SvImJ_G0039186.1 mouse_genomes_project 4 55666999 55667132 - Gm25053 snoRNA snoRNA MGP_129S1SvImJ_T0014622.1 MGP_129S1SvImJ_G0012711.1 mouse_genomes_project 4 73937192 73937845 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001449.1 MGP_129S1SvImJ_G0001370.1 mouse_genomes_project 4 145977658 145977877 + TEC TEC MGP_129S1SvImJ_T0018069.1 MGP_129S1SvImJ_G0015537.1 mouse_genomes_project 4 22086641 22375911 + processed_transcript processed_transcript MGP_129S1SvImJ_T0064785.1 MGP_129S1SvImJ_G0028074.1 mouse_genomes_project 4 12852699 12893388 + MGP_129S1SvImJ_P0064785 Nbn protein_coding protein_coding MGP_129S1SvImJ_T0064786.1 MGP_129S1SvImJ_G0028074.1 mouse_genomes_project 4 12852741 12882352 + MGP_129S1SvImJ_P0064786 Nbn protein_coding protein_coding MGP_129S1SvImJ_T0014658.1 MGP_129S1SvImJ_G0012747.1 mouse_genomes_project 4 87404992 87405763 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066702.1 MGP_129S1SvImJ_G0028532.1 mouse_genomes_project 4 107805223 107852632 - MGP_129S1SvImJ_P0066702 Tceanc2 protein_coding protein_coding MGP_129S1SvImJ_T0066703.1 MGP_129S1SvImJ_G0028532.1 mouse_genomes_project 4 107810377 107852451 - MGP_129S1SvImJ_P0066703 Tceanc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066704.1 MGP_129S1SvImJ_G0028532.1 mouse_genomes_project 4 107810432 107852368 - Tceanc2 protein_coding processed_transcript MGP_129S1SvImJ_T0066705.1 MGP_129S1SvImJ_G0028532.1 mouse_genomes_project 4 107810640 107853188 - MGP_129S1SvImJ_P0066705 Tceanc2 protein_coding protein_coding MGP_129S1SvImJ_T0066706.1 MGP_129S1SvImJ_G0028532.1 mouse_genomes_project 4 107810684 107852367 - MGP_129S1SvImJ_P0066706 Tceanc2 protein_coding protein_coding MGP_129S1SvImJ_T0066707.1 MGP_129S1SvImJ_G0028532.1 mouse_genomes_project 4 107810804 107853201 - MGP_129S1SvImJ_P0066707 Tceanc2 protein_coding protein_coding MGP_129S1SvImJ_T0066708.1 MGP_129S1SvImJ_G0028532.1 mouse_genomes_project 4 107839433 107851936 - Tceanc2 protein_coding processed_transcript MGP_129S1SvImJ_T0066709.1 MGP_129S1SvImJ_G0028532.1 mouse_genomes_project 4 107847089 107852293 - Tceanc2 protein_coding processed_transcript MGP_129S1SvImJ_T0066710.1 MGP_129S1SvImJ_G0028532.1 mouse_genomes_project 4 107850700 107851753 - Tceanc2 protein_coding processed_transcript MGP_129S1SvImJ_T0014708.1 MGP_129S1SvImJ_G0012797.1 mouse_genomes_project 4 103515214 103515430 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007969.1 MGP_129S1SvImJ_G0006512.1 mouse_genomes_project 4 130455914 130456891 + Gm12958 lincRNA lincRNA MGP_129S1SvImJ_T0011598.1 MGP_129S1SvImJ_G0009714.1 mouse_genomes_project 4 109933001 109933275 - Gm23743 misc_RNA misc_RNA MGP_129S1SvImJ_T0014673.1 MGP_129S1SvImJ_G0012762.1 mouse_genomes_project 4 92360967 92361262 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011578.1 MGP_129S1SvImJ_G0009694.1 mouse_genomes_project 4 16533736 16534026 - Gm25655 misc_RNA misc_RNA MGP_129S1SvImJ_T0064853.1 MGP_129S1SvImJ_G0028094.1 mouse_genomes_project 4 18902478 18950767 + MGP_129S1SvImJ_P0064853 Coq3 protein_coding protein_coding MGP_129S1SvImJ_T0064854.1 MGP_129S1SvImJ_G0028094.1 mouse_genomes_project 4 18935080 18936814 + Coq3 protein_coding processed_transcript MGP_129S1SvImJ_T0065744.1 MGP_129S1SvImJ_G0028297.1 mouse_genomes_project 4 51623320 51633491 + MGP_129S1SvImJ_P0065744 Nipsnap3b protein_coding protein_coding MGP_129S1SvImJ_T0065745.1 MGP_129S1SvImJ_G0028297.1 mouse_genomes_project 4 51623390 51633007 + MGP_129S1SvImJ_P0065745 Nipsnap3b protein_coding protein_coding MGP_129S1SvImJ_T0065746.1 MGP_129S1SvImJ_G0028297.1 mouse_genomes_project 4 51632406 51632936 + Nipsnap3b protein_coding processed_transcript MGP_129S1SvImJ_T0068649.1 MGP_129S1SvImJ_G0028957.1 mouse_genomes_project 4 138470422 138483552 - MGP_129S1SvImJ_P0068649 Pithd1 protein_coding protein_coding MGP_129S1SvImJ_T0068650.1 MGP_129S1SvImJ_G0028957.1 mouse_genomes_project 4 138471028 138482226 - Pithd1 protein_coding processed_transcript MGP_129S1SvImJ_T0068651.1 MGP_129S1SvImJ_G0028957.1 mouse_genomes_project 4 138471356 138473985 - Pithd1 protein_coding retained_intron MGP_129S1SvImJ_T0068652.1 MGP_129S1SvImJ_G0028957.1 mouse_genomes_project 4 138471358 138482610 - MGP_129S1SvImJ_P0068652 Pithd1 protein_coding protein_coding MGP_129S1SvImJ_T0068653.1 MGP_129S1SvImJ_G0028957.1 mouse_genomes_project 4 138472172 138483205 - MGP_129S1SvImJ_P0068653 Pithd1 protein_coding protein_coding MGP_129S1SvImJ_T0068654.1 MGP_129S1SvImJ_G0028957.1 mouse_genomes_project 4 138473412 138483369 - Pithd1 protein_coding retained_intron MGP_129S1SvImJ_T0068655.1 MGP_129S1SvImJ_G0028957.1 mouse_genomes_project 4 138482701 138483375 - Pithd1 protein_coding processed_transcript MGP_129S1SvImJ_T0066937.1 MGP_129S1SvImJ_G0028571.1 mouse_genomes_project 4 110227476 110252965 - MGP_129S1SvImJ_P0066937 Rnf11 protein_coding protein_coding MGP_129S1SvImJ_T0066938.1 MGP_129S1SvImJ_G0028571.1 mouse_genomes_project 4 110229277 110253272 - MGP_129S1SvImJ_P0066938 Rnf11 protein_coding protein_coding MGP_129S1SvImJ_T0066939.1 MGP_129S1SvImJ_G0028571.1 mouse_genomes_project 4 110230662 110260993 - MGP_129S1SvImJ_P0066939 Rnf11 protein_coding protein_coding MGP_129S1SvImJ_T0018096.1 MGP_129S1SvImJ_G0015556.1 mouse_genomes_project 4 89367395 89412119 + Gm12610 processed_transcript processed_transcript MGP_129S1SvImJ_T0014444.1 MGP_129S1SvImJ_G0012533.1 mouse_genomes_project 4 13615079 13615738 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099823.1 MGP_129S1SvImJ_G0037890.1 mouse_genomes_project 4 38970645 38970752 + Gm25637 snRNA snRNA MGP_129S1SvImJ_T0018084.1 MGP_129S1SvImJ_G0015548.1 mouse_genomes_project 4 56568681 56575938 - Gm12526 processed_transcript processed_transcript MGP_129S1SvImJ_T0066083.1 MGP_129S1SvImJ_G0028392.1 mouse_genomes_project 4 75237186 75762844 - MGP_129S1SvImJ_P0066083 Ptprd protein_coding protein_coding MGP_129S1SvImJ_T0066084.1 MGP_129S1SvImJ_G0028392.1 mouse_genomes_project 4 75237187 75430890 - MGP_129S1SvImJ_P0066084 Ptprd protein_coding protein_coding MGP_129S1SvImJ_T0066085.1 MGP_129S1SvImJ_G0028392.1 mouse_genomes_project 4 75241033 75919866 - MGP_129S1SvImJ_P0066085 Ptprd protein_coding protein_coding MGP_129S1SvImJ_T0066086.1 MGP_129S1SvImJ_G0028392.1 mouse_genomes_project 4 75241185 75633412 - MGP_129S1SvImJ_P0066086 Ptprd protein_coding protein_coding MGP_129S1SvImJ_T0066087.1 MGP_129S1SvImJ_G0028392.1 mouse_genomes_project 4 75241185 75633391 - MGP_129S1SvImJ_P0066087 Ptprd protein_coding protein_coding MGP_129S1SvImJ_T0066088.1 MGP_129S1SvImJ_G0028392.1 mouse_genomes_project 4 75241185 75633412 - MGP_129S1SvImJ_P0066088 Ptprd protein_coding protein_coding MGP_129S1SvImJ_T0066089.1 MGP_129S1SvImJ_G0028392.1 mouse_genomes_project 4 75241185 75633412 - MGP_129S1SvImJ_P0066089 Ptprd protein_coding protein_coding MGP_129S1SvImJ_T0066090.1 MGP_129S1SvImJ_G0028392.1 mouse_genomes_project 4 75241185 75650863 - MGP_129S1SvImJ_P0066090 Ptprd protein_coding protein_coding MGP_129S1SvImJ_T0066091.1 MGP_129S1SvImJ_G0028392.1 mouse_genomes_project 4 75241185 75633412 - MGP_129S1SvImJ_P0066091 Ptprd protein_coding protein_coding MGP_129S1SvImJ_T0066092.1 MGP_129S1SvImJ_G0028392.1 mouse_genomes_project 4 75381738 75400960 - Ptprd protein_coding retained_intron MGP_129S1SvImJ_T0066093.1 MGP_129S1SvImJ_G0028392.1 mouse_genomes_project 4 75383865 75386011 - MGP_129S1SvImJ_P0066093 Ptprd protein_coding protein_coding MGP_129S1SvImJ_T0066094.1 MGP_129S1SvImJ_G0028392.1 mouse_genomes_project 4 75398938 75406816 - MGP_129S1SvImJ_P0066094 Ptprd protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066095.1 MGP_129S1SvImJ_G0028392.1 mouse_genomes_project 4 75430168 75431149 - MGP_129S1SvImJ_P0066095 Ptprd protein_coding protein_coding MGP_129S1SvImJ_T0066096.1 MGP_129S1SvImJ_G0028392.1 mouse_genomes_project 4 75436382 77646655 - Ptprd protein_coding processed_transcript MGP_129S1SvImJ_T0066097.1 MGP_129S1SvImJ_G0028392.1 mouse_genomes_project 4 75437358 75633436 - Ptprd protein_coding processed_transcript MGP_129S1SvImJ_T0066098.1 MGP_129S1SvImJ_G0028392.1 mouse_genomes_project 4 75916886 77646627 - Ptprd protein_coding processed_transcript MGP_129S1SvImJ_T0066099.1 MGP_129S1SvImJ_G0028392.1 mouse_genomes_project 4 75919106 77646499 - Ptprd protein_coding processed_transcript MGP_129S1SvImJ_T0066100.1 MGP_129S1SvImJ_G0028392.1 mouse_genomes_project 4 76564480 77646499 - Ptprd protein_coding retained_intron MGP_129S1SvImJ_T0066101.1 MGP_129S1SvImJ_G0028392.1 mouse_genomes_project 4 76743134 77646721 - Ptprd protein_coding processed_transcript MGP_129S1SvImJ_T0066102.1 MGP_129S1SvImJ_G0028392.1 mouse_genomes_project 4 77352251 77646612 - Ptprd protein_coding processed_transcript MGP_129S1SvImJ_T0066103.1 MGP_129S1SvImJ_G0028392.1 mouse_genomes_project 4 77359964 77646603 - Ptprd protein_coding retained_intron MGP_129S1SvImJ_T0004616.1 MGP_129S1SvImJ_G0004007.1 mouse_genomes_project 4 153649253 153652546 + antisense antisense MGP_129S1SvImJ_T0004617.1 MGP_129S1SvImJ_G0004007.1 mouse_genomes_project 4 153649253 153652671 + antisense antisense MGP_129S1SvImJ_T0007991.1 MGP_129S1SvImJ_G0006527.1 mouse_genomes_project 4 134168073 134168857 + Gm13063 lincRNA lincRNA MGP_129S1SvImJ_T0099839.1 MGP_129S1SvImJ_G0037906.1 mouse_genomes_project 4 82866053 82866160 - Gm23412 snRNA snRNA MGP_129S1SvImJ_T0065082.1 MGP_129S1SvImJ_G0028149.1 mouse_genomes_project 4 38830158 38842200 + MGP_129S1SvImJ_P0065082 Spink4 protein_coding protein_coding MGP_129S1SvImJ_T0065083.1 MGP_129S1SvImJ_G0028149.1 mouse_genomes_project 4 38830160 38835151 + Spink4 protein_coding processed_transcript MGP_129S1SvImJ_T0069118.1 MGP_129S1SvImJ_G0029074.1 mouse_genomes_project 4 146816595 147722327 + MGP_129S1SvImJ_P0069118 protein_coding protein_coding MGP_129S1SvImJ_T0069130.1 MGP_129S1SvImJ_G0029074.1 mouse_genomes_project 4 147712628 147722328 + MGP_129S1SvImJ_P0069130 protein_coding protein_coding MGP_129S1SvImJ_T0069575.1 MGP_129S1SvImJ_G0029182.1 mouse_genomes_project 4 156512456 156574157 - MGP_129S1SvImJ_P0069575 Kcnab2 protein_coding protein_coding MGP_129S1SvImJ_T0069576.1 MGP_129S1SvImJ_G0029182.1 mouse_genomes_project 4 156512458 156603260 - MGP_129S1SvImJ_P0069576 Kcnab2 protein_coding protein_coding MGP_129S1SvImJ_T0069577.1 MGP_129S1SvImJ_G0029182.1 mouse_genomes_project 4 156512459 156602914 - MGP_129S1SvImJ_P0069577 Kcnab2 protein_coding protein_coding MGP_129S1SvImJ_T0069578.1 MGP_129S1SvImJ_G0029182.1 mouse_genomes_project 4 156514471 156602822 - MGP_129S1SvImJ_P0069578 Kcnab2 protein_coding protein_coding MGP_129S1SvImJ_T0069579.1 MGP_129S1SvImJ_G0029182.1 mouse_genomes_project 4 156514532 156574157 - MGP_129S1SvImJ_P0069579 Kcnab2 protein_coding protein_coding MGP_129S1SvImJ_T0069580.1 MGP_129S1SvImJ_G0029182.1 mouse_genomes_project 4 156516732 156546572 - Kcnab2 protein_coding processed_transcript MGP_129S1SvImJ_T0069581.1 MGP_129S1SvImJ_G0029182.1 mouse_genomes_project 4 156522534 156554465 - Kcnab2 protein_coding processed_transcript MGP_129S1SvImJ_T0069582.1 MGP_129S1SvImJ_G0029182.1 mouse_genomes_project 4 156523454 156580388 - MGP_129S1SvImJ_P0069582 Kcnab2 protein_coding protein_coding MGP_129S1SvImJ_T0069583.1 MGP_129S1SvImJ_G0029182.1 mouse_genomes_project 4 156524575 156574058 - Kcnab2 protein_coding processed_transcript MGP_129S1SvImJ_T0069584.1 MGP_129S1SvImJ_G0029182.1 mouse_genomes_project 4 156535680 156602933 - Kcnab2 protein_coding retained_intron MGP_129S1SvImJ_T0069585.1 MGP_129S1SvImJ_G0029182.1 mouse_genomes_project 4 156535834 156549673 - Kcnab2 protein_coding processed_transcript MGP_129S1SvImJ_T0069586.1 MGP_129S1SvImJ_G0029182.1 mouse_genomes_project 4 156536664 156542239 - Kcnab2 protein_coding processed_transcript MGP_129S1SvImJ_T0069587.1 MGP_129S1SvImJ_G0029182.1 mouse_genomes_project 4 156550242 156574058 - Kcnab2 protein_coding processed_transcript MGP_129S1SvImJ_T0069588.1 MGP_129S1SvImJ_G0029182.1 mouse_genomes_project 4 156558600 156602884 - MGP_129S1SvImJ_P0069588 Kcnab2 protein_coding protein_coding MGP_129S1SvImJ_T0066067.1 MGP_129S1SvImJ_G0028386.1 mouse_genomes_project 4 72631063 72637398 - MGP_129S1SvImJ_P0066067 protein_coding protein_coding MGP_129S1SvImJ_T0004511.1 MGP_129S1SvImJ_G0003927.1 mouse_genomes_project 4 107215280 107217302 - Gm12744 antisense antisense MGP_129S1SvImJ_T0014592.1 MGP_129S1SvImJ_G0012681.1 mouse_genomes_project 4 58265741 58266461 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069126.1 MGP_129S1SvImJ_G0029081.1 mouse_genomes_project 4 147617498 147620863 - MGP_129S1SvImJ_P0069126 protein_coding protein_coding MGP_129S1SvImJ_T0065679.1 MGP_129S1SvImJ_G0028275.1 mouse_genomes_project 4 46961657 46984778 + MGP_129S1SvImJ_P0065679 Msantd3 protein_coding protein_coding MGP_129S1SvImJ_T0065680.1 MGP_129S1SvImJ_G0028275.1 mouse_genomes_project 4 46961801 46984437 + MGP_129S1SvImJ_P0065680 Msantd3 protein_coding protein_coding MGP_129S1SvImJ_T0065681.1 MGP_129S1SvImJ_G0028275.1 mouse_genomes_project 4 46982805 46984778 + Msantd3 protein_coding processed_transcript MGP_129S1SvImJ_T0069106.1 MGP_129S1SvImJ_G0029067.1 mouse_genomes_project 4 146571268 146593967 + MGP_129S1SvImJ_P0069106 Lrrc38 protein_coding protein_coding MGP_129S1SvImJ_T0065909.1 MGP_129S1SvImJ_G0028340.1 mouse_genomes_project 4 58730680 58835046 + MGP_129S1SvImJ_P0065909 Snx30 protein_coding protein_coding MGP_129S1SvImJ_T0065910.1 MGP_129S1SvImJ_G0028340.1 mouse_genomes_project 4 58730720 58760484 + Snx30 protein_coding processed_transcript MGP_129S1SvImJ_T0065911.1 MGP_129S1SvImJ_G0028340.1 mouse_genomes_project 4 58814973 58830821 + Snx30 protein_coding processed_transcript MGP_129S1SvImJ_T0065912.1 MGP_129S1SvImJ_G0028340.1 mouse_genomes_project 4 58815059 58824845 + Snx30 protein_coding processed_transcript MGP_129S1SvImJ_T0099814.1 MGP_129S1SvImJ_G0037881.1 mouse_genomes_project 4 23068081 23068187 + Gm24965 snRNA snRNA MGP_129S1SvImJ_T0099859.1 MGP_129S1SvImJ_G0037926.1 mouse_genomes_project 4 115597699 115597832 - Gm23230 snRNA snRNA MGP_129S1SvImJ_T0018113.1 MGP_129S1SvImJ_G0015568.1 mouse_genomes_project 4 115665970 115679142 + Foxd2os processed_transcript processed_transcript MGP_129S1SvImJ_T0018114.1 MGP_129S1SvImJ_G0015568.1 mouse_genomes_project 4 115665970 115681206 + Foxd2os processed_transcript processed_transcript MGP_129S1SvImJ_T0014809.1 MGP_129S1SvImJ_G0012898.1 mouse_genomes_project 4 136678812 136679073 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068829.1 MGP_129S1SvImJ_G0028998.1 mouse_genomes_project 4 141199836 141207333 + MGP_129S1SvImJ_P0068829 Camk2n1 protein_coding protein_coding MGP_129S1SvImJ_T0067301.1 MGP_129S1SvImJ_G0028651.1 mouse_genomes_project 4 118544507 118673123 + MGP_129S1SvImJ_P0067301 Eri3 protein_coding protein_coding MGP_129S1SvImJ_T0067302.1 MGP_129S1SvImJ_G0028651.1 mouse_genomes_project 4 118546752 118578299 + MGP_129S1SvImJ_P0067302 Eri3 protein_coding protein_coding MGP_129S1SvImJ_T0067303.1 MGP_129S1SvImJ_G0028651.1 mouse_genomes_project 4 118558782 118673123 + Eri3 protein_coding processed_transcript MGP_129S1SvImJ_T0067304.1 MGP_129S1SvImJ_G0028651.1 mouse_genomes_project 4 118578268 118612530 + MGP_129S1SvImJ_P0067304 Eri3 protein_coding protein_coding MGP_129S1SvImJ_T0067305.1 MGP_129S1SvImJ_G0028651.1 mouse_genomes_project 4 118584659 118612189 + Eri3 protein_coding processed_transcript MGP_129S1SvImJ_T0067306.1 MGP_129S1SvImJ_G0028651.1 mouse_genomes_project 4 118636062 118673107 + Eri3 protein_coding processed_transcript MGP_129S1SvImJ_T0101127.1 MGP_129S1SvImJ_G0039194.1 mouse_genomes_project 4 72346364 72346491 + Gm25769 snoRNA snoRNA MGP_129S1SvImJ_T0014471.1 MGP_129S1SvImJ_G0012560.1 mouse_genomes_project 4 21538951 21540667 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068726.1 MGP_129S1SvImJ_G0028976.1 mouse_genomes_project 4 139523453 139551611 - MGP_129S1SvImJ_P0068726 Epha8 protein_coding protein_coding MGP_129S1SvImJ_T0014757.1 MGP_129S1SvImJ_G0012846.1 mouse_genomes_project 4 119554295 119554722 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066644.1 MGP_129S1SvImJ_G0028524.1 mouse_genomes_project 4 107299642 107316333 - MGP_129S1SvImJ_P0066644 Ttc4 protein_coding protein_coding MGP_129S1SvImJ_T0066645.1 MGP_129S1SvImJ_G0028524.1 mouse_genomes_project 4 107299646 107316075 - Ttc4 protein_coding processed_transcript MGP_129S1SvImJ_T0066646.1 MGP_129S1SvImJ_G0028524.1 mouse_genomes_project 4 107299819 107304931 - Ttc4 protein_coding processed_transcript MGP_129S1SvImJ_T0066647.1 MGP_129S1SvImJ_G0028524.1 mouse_genomes_project 4 107300450 107316255 - MGP_129S1SvImJ_P0066647 Ttc4 protein_coding protein_coding MGP_129S1SvImJ_T0066648.1 MGP_129S1SvImJ_G0028524.1 mouse_genomes_project 4 107305027 107309065 - Ttc4 protein_coding processed_transcript MGP_129S1SvImJ_T0066649.1 MGP_129S1SvImJ_G0028524.1 mouse_genomes_project 4 107305530 107308413 - Ttc4 protein_coding processed_transcript MGP_129S1SvImJ_T0066650.1 MGP_129S1SvImJ_G0028524.1 mouse_genomes_project 4 107307844 107316280 - MGP_129S1SvImJ_P0066650 Ttc4 protein_coding protein_coding MGP_129S1SvImJ_T0066651.1 MGP_129S1SvImJ_G0028524.1 mouse_genomes_project 4 107309119 107316290 - Ttc4 protein_coding processed_transcript MGP_129S1SvImJ_T0066652.1 MGP_129S1SvImJ_G0028524.1 mouse_genomes_project 4 107313670 107316278 - Ttc4 protein_coding processed_transcript MGP_129S1SvImJ_T0068228.1 MGP_129S1SvImJ_G0028863.1 mouse_genomes_project 4 134235452 134268926 - MGP_129S1SvImJ_P0068228 Oprd1 protein_coding protein_coding MGP_129S1SvImJ_T0067894.1 MGP_129S1SvImJ_G0028803.1 mouse_genomes_project 4 130397950 130404374 - Zscan20 protein_coding processed_transcript MGP_129S1SvImJ_T0067895.1 MGP_129S1SvImJ_G0028803.1 mouse_genomes_project 4 130397958 130425711 - MGP_129S1SvImJ_P0067895 Zscan20 protein_coding protein_coding MGP_129S1SvImJ_T0067896.1 MGP_129S1SvImJ_G0028803.1 mouse_genomes_project 4 130399786 130425655 - MGP_129S1SvImJ_P0067896 Zscan20 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067897.1 MGP_129S1SvImJ_G0028803.1 mouse_genomes_project 4 130417028 130425647 - Zscan20 protein_coding retained_intron MGP_129S1SvImJ_T0067898.1 MGP_129S1SvImJ_G0028803.1 mouse_genomes_project 4 130420063 130425608 - MGP_129S1SvImJ_P0067898 Zscan20 protein_coding protein_coding MGP_129S1SvImJ_T0067899.1 MGP_129S1SvImJ_G0028803.1 mouse_genomes_project 4 130420097 130425594 - MGP_129S1SvImJ_P0067899 Zscan20 protein_coding protein_coding MGP_129S1SvImJ_T0001433.1 MGP_129S1SvImJ_G0001356.1 mouse_genomes_project 4 99499680 99502143 + TEC TEC MGP_129S1SvImJ_T0099881.1 MGP_129S1SvImJ_G0037948.1 mouse_genomes_project 4 138027315 138027416 + Gm23106 snRNA snRNA MGP_129S1SvImJ_T0014737.1 MGP_129S1SvImJ_G0012826.1 mouse_genomes_project 4 112648195 112649185 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066653.1 MGP_129S1SvImJ_G0028525.1 mouse_genomes_project 4 107317805 107369985 - MGP_129S1SvImJ_P0066653 Mroh7 protein_coding protein_coding MGP_129S1SvImJ_T0066654.1 MGP_129S1SvImJ_G0028525.1 mouse_genomes_project 4 107317812 107349939 - Mroh7 protein_coding processed_transcript MGP_129S1SvImJ_T0066655.1 MGP_129S1SvImJ_G0028525.1 mouse_genomes_project 4 107317812 107348456 - Mroh7 protein_coding retained_intron MGP_129S1SvImJ_T0066656.1 MGP_129S1SvImJ_G0028525.1 mouse_genomes_project 4 107318025 107349623 - Mroh7 protein_coding processed_transcript MGP_129S1SvImJ_T0066657.1 MGP_129S1SvImJ_G0028525.1 mouse_genomes_project 4 107330903 107339985 - Mroh7 protein_coding processed_transcript MGP_129S1SvImJ_T0066658.1 MGP_129S1SvImJ_G0028525.1 mouse_genomes_project 4 107348397 107370031 - MGP_129S1SvImJ_P0066658 Mroh7 protein_coding protein_coding MGP_129S1SvImJ_T0066659.1 MGP_129S1SvImJ_G0028525.1 mouse_genomes_project 4 107360976 107374513 - MGP_129S1SvImJ_P0066659 Mroh7 protein_coding protein_coding MGP_129S1SvImJ_T0068139.1 MGP_129S1SvImJ_G0028846.1 mouse_genomes_project 4 132202209 132202957 - Gm853 protein_coding processed_transcript MGP_129S1SvImJ_T0068140.1 MGP_129S1SvImJ_G0028846.1 mouse_genomes_project 4 132202209 132215469 - MGP_129S1SvImJ_P0068140 Gm853 protein_coding protein_coding MGP_129S1SvImJ_T0098589.1 MGP_129S1SvImJ_G0036674.1 mouse_genomes_project 4 52522663 52522782 + n-R5s185 rRNA rRNA MGP_129S1SvImJ_T0069127.1 MGP_129S1SvImJ_G0029082.1 mouse_genomes_project 4 147680786 147684033 + MGP_129S1SvImJ_P0069127 protein_coding protein_coding MGP_129S1SvImJ_T0004546.1 MGP_129S1SvImJ_G0003953.1 mouse_genomes_project 4 125320533 125349972 - 1700121C08Rik antisense antisense MGP_129S1SvImJ_T0067276.1 MGP_129S1SvImJ_G0028647.1 mouse_genomes_project 4 118122968 118147351 - MGP_129S1SvImJ_P0067276 Kif2c protein_coding protein_coding MGP_129S1SvImJ_T0067277.1 MGP_129S1SvImJ_G0028647.1 mouse_genomes_project 4 118123472 118143652 - MGP_129S1SvImJ_P0067277 Kif2c protein_coding protein_coding MGP_129S1SvImJ_T0067278.1 MGP_129S1SvImJ_G0028647.1 mouse_genomes_project 4 118129530 118130264 - Kif2c protein_coding retained_intron MGP_129S1SvImJ_T0067279.1 MGP_129S1SvImJ_G0028647.1 mouse_genomes_project 4 118138592 118147254 - Kif2c protein_coding retained_intron MGP_129S1SvImJ_T0067280.1 MGP_129S1SvImJ_G0028647.1 mouse_genomes_project 4 118138594 118147318 - Kif2c protein_coding processed_transcript MGP_129S1SvImJ_T0067281.1 MGP_129S1SvImJ_G0028647.1 mouse_genomes_project 4 118139332 118147304 - Kif2c protein_coding retained_intron MGP_129S1SvImJ_T0067282.1 MGP_129S1SvImJ_G0028647.1 mouse_genomes_project 4 118139873 118143634 - Kif2c protein_coding processed_transcript MGP_129S1SvImJ_T0067283.1 MGP_129S1SvImJ_G0028647.1 mouse_genomes_project 4 118139916 118143650 - MGP_129S1SvImJ_P0067283 Kif2c protein_coding protein_coding MGP_129S1SvImJ_T0067307.1 MGP_129S1SvImJ_G0028652.1 mouse_genomes_project 4 118673506 118681079 - Dmap1 protein_coding processed_transcript MGP_129S1SvImJ_T0067308.1 MGP_129S1SvImJ_G0028652.1 mouse_genomes_project 4 118673506 118681099 - MGP_129S1SvImJ_P0067308 Dmap1 protein_coding protein_coding MGP_129S1SvImJ_T0067309.1 MGP_129S1SvImJ_G0028652.1 mouse_genomes_project 4 118673511 118680809 - Dmap1 protein_coding processed_transcript MGP_129S1SvImJ_T0067310.1 MGP_129S1SvImJ_G0028652.1 mouse_genomes_project 4 118679745 118681047 - Dmap1 protein_coding processed_transcript MGP_129S1SvImJ_T0067311.1 MGP_129S1SvImJ_G0028652.1 mouse_genomes_project 4 118680127 118681037 - Dmap1 protein_coding processed_transcript MGP_129S1SvImJ_T0067312.1 MGP_129S1SvImJ_G0028652.1 mouse_genomes_project 4 118680412 118681097 - Dmap1 protein_coding processed_transcript MGP_129S1SvImJ_T0014434.1 MGP_129S1SvImJ_G0012523.1 mouse_genomes_project 4 12385893 12386348 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102549.1 MGP_129S1SvImJ_G0040382.1 mouse_genomes_project 4 146628870 146629940 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0067327.1 MGP_129S1SvImJ_G0028657.1 mouse_genomes_project 4 118872458 118887560 - MGP_129S1SvImJ_P0067327 B4galt2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067334.1 MGP_129S1SvImJ_G0028657.1 mouse_genomes_project 4 118876218 118887882 - MGP_129S1SvImJ_P0067334 B4galt2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067335.1 MGP_129S1SvImJ_G0028657.1 mouse_genomes_project 4 118876328 118887893 - MGP_129S1SvImJ_P0067335 B4galt2 protein_coding protein_coding MGP_129S1SvImJ_T0067336.1 MGP_129S1SvImJ_G0028657.1 mouse_genomes_project 4 118876499 118887517 - MGP_129S1SvImJ_P0067336 B4galt2 protein_coding protein_coding MGP_129S1SvImJ_T0067338.1 MGP_129S1SvImJ_G0028657.1 mouse_genomes_project 4 118881978 118887560 - MGP_129S1SvImJ_P0067338 B4galt2 protein_coding protein_coding MGP_129S1SvImJ_T0067339.1 MGP_129S1SvImJ_G0028657.1 mouse_genomes_project 4 118885423 118887624 - B4galt2 protein_coding processed_transcript MGP_129S1SvImJ_T0067340.1 MGP_129S1SvImJ_G0028657.1 mouse_genomes_project 4 118885797 118886696 - MGP_129S1SvImJ_P0067340 B4galt2 protein_coding protein_coding MGP_129S1SvImJ_T0069865.1 MGP_129S1SvImJ_G0029234.1 mouse_genomes_project 4 160229756 160233837 - MGP_129S1SvImJ_P0069865 Tas1r3 protein_coding protein_coding MGP_129S1SvImJ_T0067214.1 MGP_129S1SvImJ_G0028635.1 mouse_genomes_project 4 117725905 117740519 - MGP_129S1SvImJ_P0067214 Toe1 protein_coding protein_coding MGP_129S1SvImJ_T0067215.1 MGP_129S1SvImJ_G0028635.1 mouse_genomes_project 4 117736972 117740611 - MGP_129S1SvImJ_P0067215 Toe1 protein_coding protein_coding MGP_129S1SvImJ_T0067216.1 MGP_129S1SvImJ_G0028635.1 mouse_genomes_project 4 117736982 117738163 - Toe1 protein_coding processed_transcript MGP_129S1SvImJ_T0067217.1 MGP_129S1SvImJ_G0028635.1 mouse_genomes_project 4 117737644 117738576 - Toe1 protein_coding retained_intron MGP_129S1SvImJ_T0067218.1 MGP_129S1SvImJ_G0028635.1 mouse_genomes_project 4 117737752 117739494 - MGP_129S1SvImJ_P0067218 Toe1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067219.1 MGP_129S1SvImJ_G0028635.1 mouse_genomes_project 4 117738246 117739571 - Toe1 protein_coding retained_intron MGP_129S1SvImJ_T0067220.1 MGP_129S1SvImJ_G0028635.1 mouse_genomes_project 4 117738681 117740577 - Toe1 protein_coding processed_transcript MGP_129S1SvImJ_T0067221.1 MGP_129S1SvImJ_G0028635.1 mouse_genomes_project 4 117738787 117740519 - Toe1 protein_coding retained_intron MGP_129S1SvImJ_T0102536.1 MGP_129S1SvImJ_G0040369.1 mouse_genomes_project 4 115943586 115944632 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0066070.1 MGP_129S1SvImJ_G0028388.1 mouse_genomes_project 4 73164695 73167092 - 2310002L09Rik protein_coding processed_transcript MGP_129S1SvImJ_T0066071.1 MGP_129S1SvImJ_G0028388.1 mouse_genomes_project 4 73164695 73180865 - MGP_129S1SvImJ_P0066071 2310002L09Rik protein_coding protein_coding MGP_129S1SvImJ_T0066072.1 MGP_129S1SvImJ_G0028388.1 mouse_genomes_project 4 73166869 73180864 - MGP_129S1SvImJ_P0066072 2310002L09Rik protein_coding protein_coding MGP_129S1SvImJ_T0065765.1 MGP_129S1SvImJ_G0028302.1 mouse_genomes_project 4 52427286 52439769 + MGP_129S1SvImJ_P0065765 Tal2 protein_coding protein_coding MGP_129S1SvImJ_T0068242.1 MGP_129S1SvImJ_G0028867.1 mouse_genomes_project 4 134442241 134443432 - MGP_129S1SvImJ_P0068242 Rab42 protein_coding protein_coding MGP_129S1SvImJ_T0004539.1 MGP_129S1SvImJ_G0003948.1 mouse_genomes_project 4 120312860 120317938 - Gm12868 antisense antisense MGP_129S1SvImJ_T0007927.1 MGP_129S1SvImJ_G0006484.1 mouse_genomes_project 4 107117224 107124736 - Tmem61 lincRNA lincRNA MGP_129S1SvImJ_T0007928.1 MGP_129S1SvImJ_G0006484.1 mouse_genomes_project 4 107117456 107121514 - Tmem61 lincRNA lincRNA MGP_129S1SvImJ_T0010632.1 MGP_129S1SvImJ_G0008748.1 mouse_genomes_project 4 120308918 120308984 + Mir1957a miRNA miRNA MGP_129S1SvImJ_T0098754.1 MGP_129S1SvImJ_G0036839.1 mouse_genomes_project 4 135038179 135038344 - Gm22767 scaRNA scaRNA MGP_129S1SvImJ_T0014664.1 MGP_129S1SvImJ_G0012753.1 mouse_genomes_project 4 89387922 89390862 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007896.1 MGP_129S1SvImJ_G0006459.1 mouse_genomes_project 4 88983470 89021125 + Gm12603 lincRNA lincRNA MGP_129S1SvImJ_T0007897.1 MGP_129S1SvImJ_G0006459.1 mouse_genomes_project 4 88991969 89021228 + Gm12603 lincRNA lincRNA MGP_129S1SvImJ_T0067016.1 MGP_129S1SvImJ_G0028585.1 mouse_genomes_project 4 113064831 113127759 - MGP_129S1SvImJ_P0067016 Skint10 protein_coding protein_coding MGP_129S1SvImJ_T0067017.1 MGP_129S1SvImJ_G0028585.1 mouse_genomes_project 4 113122804 113127800 - MGP_129S1SvImJ_P0067017 Skint10 protein_coding protein_coding MGP_129S1SvImJ_T0067018.1 MGP_129S1SvImJ_G0028585.1 mouse_genomes_project 4 113124229 113127761 - Skint10 protein_coding processed_transcript MGP_129S1SvImJ_T0065573.1 MGP_129S1SvImJ_G0028250.1 mouse_genomes_project 4 44235789 44308259 + MGP_129S1SvImJ_P0065573 Tdrd7 protein_coding protein_coding MGP_129S1SvImJ_T0065574.1 MGP_129S1SvImJ_G0028250.1 mouse_genomes_project 4 44242685 44308259 + MGP_129S1SvImJ_P0065574 Tdrd7 protein_coding protein_coding MGP_129S1SvImJ_T0065575.1 MGP_129S1SvImJ_G0028250.1 mouse_genomes_project 4 44243286 44258108 + Tdrd7 protein_coding processed_transcript MGP_129S1SvImJ_T0065576.1 MGP_129S1SvImJ_G0028250.1 mouse_genomes_project 4 44260605 44276019 + Tdrd7 protein_coding processed_transcript MGP_129S1SvImJ_T0065577.1 MGP_129S1SvImJ_G0028250.1 mouse_genomes_project 4 44299893 44308259 + Tdrd7 protein_coding processed_transcript MGP_129S1SvImJ_T0098367.1 MGP_129S1SvImJ_G0036452.1 mouse_genomes_project 4 160046178 160048318 + pseudogene pseudogene MGP_129S1SvImJ_T0014679.1 MGP_129S1SvImJ_G0012768.1 mouse_genomes_project 4 94446330 94446918 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014546.1 MGP_129S1SvImJ_G0012635.1 mouse_genomes_project 4 44621926 44622360 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069821.1 MGP_129S1SvImJ_G0029225.1 mouse_genomes_project 4 160095682 160119092 - MGP_129S1SvImJ_P0069821 Atad3a protein_coding protein_coding MGP_129S1SvImJ_T0069822.1 MGP_129S1SvImJ_G0029225.1 mouse_genomes_project 4 160095875 160101392 - Atad3a protein_coding retained_intron MGP_129S1SvImJ_T0069823.1 MGP_129S1SvImJ_G0029225.1 mouse_genomes_project 4 160102248 160104114 - Atad3a protein_coding retained_intron MGP_129S1SvImJ_T0069824.1 MGP_129S1SvImJ_G0029225.1 mouse_genomes_project 4 160105138 160112413 - MGP_129S1SvImJ_P0069824 Atad3a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069825.1 MGP_129S1SvImJ_G0029225.1 mouse_genomes_project 4 160105440 160111104 - MGP_129S1SvImJ_P0069825 Atad3a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069826.1 MGP_129S1SvImJ_G0029225.1 mouse_genomes_project 4 160106420 160118927 - MGP_129S1SvImJ_P0069826 Atad3a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069827.1 MGP_129S1SvImJ_G0029225.1 mouse_genomes_project 4 160109952 160119067 - MGP_129S1SvImJ_P0069827 Atad3a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069828.1 MGP_129S1SvImJ_G0029225.1 mouse_genomes_project 4 160112174 160119086 - Atad3a protein_coding retained_intron MGP_129S1SvImJ_T0065200.1 MGP_129S1SvImJ_G0028180.1 mouse_genomes_project 4 40065354 40066219 - MGP_129S1SvImJ_P0065200 protein_coding protein_coding MGP_129S1SvImJ_T0099884.1 MGP_129S1SvImJ_G0037951.1 mouse_genomes_project 4 141351372 141351478 - Gm22961 snRNA snRNA MGP_129S1SvImJ_T0101100.1 MGP_129S1SvImJ_G0039167.1 mouse_genomes_project 4 35019321 35019446 + Gm22732 snoRNA snoRNA MGP_129S1SvImJ_T0004558.1 MGP_129S1SvImJ_G0003963.1 mouse_genomes_project 4 131415317 131433140 - Gm12979 antisense antisense MGP_129S1SvImJ_T0010630.1 MGP_129S1SvImJ_G0008746.1 mouse_genomes_project 4 118564158 118564232 + Gm25559 miRNA miRNA MGP_129S1SvImJ_T0068316.1 MGP_129S1SvImJ_G0028882.1 mouse_genomes_project 4 135055205 135089604 - MGP_129S1SvImJ_P0068316 Stx12 protein_coding protein_coding MGP_129S1SvImJ_T0068317.1 MGP_129S1SvImJ_G0028882.1 mouse_genomes_project 4 135058750 135068375 - Stx12 protein_coding processed_transcript MGP_129S1SvImJ_T0010669.1 MGP_129S1SvImJ_G0008785.1 mouse_genomes_project 4 151836866 151836927 - Mir7022 miRNA miRNA MGP_129S1SvImJ_T0014430.1 MGP_129S1SvImJ_G0012519.1 mouse_genomes_project 4 11219986 11220427 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014411.1 MGP_129S1SvImJ_G0012500.1 mouse_genomes_project 4 5033016 5033348 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069213.1 MGP_129S1SvImJ_G0029118.1 mouse_genomes_project 4 151818383 151828996 + Mad2l2 protein_coding processed_transcript MGP_129S1SvImJ_T0069214.1 MGP_129S1SvImJ_G0029118.1 mouse_genomes_project 4 151828386 151835056 + MGP_129S1SvImJ_P0069214 Mad2l2 protein_coding protein_coding MGP_129S1SvImJ_T0069215.1 MGP_129S1SvImJ_G0029118.1 mouse_genomes_project 4 151828928 151835055 + MGP_129S1SvImJ_P0069215 Mad2l2 protein_coding protein_coding MGP_129S1SvImJ_T0069216.1 MGP_129S1SvImJ_G0029118.1 mouse_genomes_project 4 151828966 151833389 + Mad2l2 protein_coding retained_intron MGP_129S1SvImJ_T0069217.1 MGP_129S1SvImJ_G0029118.1 mouse_genomes_project 4 151828999 151835619 + MGP_129S1SvImJ_P0069217 Mad2l2 protein_coding protein_coding MGP_129S1SvImJ_T0069218.1 MGP_129S1SvImJ_G0029118.1 mouse_genomes_project 4 151834724 151835386 + Mad2l2 protein_coding retained_intron MGP_129S1SvImJ_T0007950.1 MGP_129S1SvImJ_G0006502.1 mouse_genomes_project 4 125814445 125823070 - 1700021L23Rik lincRNA lincRNA MGP_129S1SvImJ_T0014522.1 MGP_129S1SvImJ_G0012611.1 mouse_genomes_project 4 35620132 35630236 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101123.1 MGP_129S1SvImJ_G0039190.1 mouse_genomes_project 4 61942623 61942757 + Gm25391 snoRNA snoRNA MGP_129S1SvImJ_T0065448.1 MGP_129S1SvImJ_G0028230.1 mouse_genomes_project 4 42116212 42118153 + MGP_129S1SvImJ_P0065448 Ccin protein_coding protein_coding MGP_129S1SvImJ_T0014674.1 MGP_129S1SvImJ_G0012763.1 mouse_genomes_project 4 92972801 92973294 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018061.1 MGP_129S1SvImJ_G0015533.1 mouse_genomes_project 4 8662463 8690141 + 1700123M08Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018062.1 MGP_129S1SvImJ_G0015533.1 mouse_genomes_project 4 8662472 8689860 + 1700123M08Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018063.1 MGP_129S1SvImJ_G0015533.1 mouse_genomes_project 4 8676060 8677552 + 1700123M08Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0068988.1 MGP_129S1SvImJ_G0029038.1 mouse_genomes_project 4 144098307 144129560 + MGP_129S1SvImJ_P0068988 Spata21 protein_coding protein_coding MGP_129S1SvImJ_T0068989.1 MGP_129S1SvImJ_G0029038.1 mouse_genomes_project 4 144118338 144128343 + Spata21 protein_coding retained_intron MGP_129S1SvImJ_T0010659.1 MGP_129S1SvImJ_G0008775.1 mouse_genomes_project 4 140875997 140876081 + Mir6399 miRNA miRNA MGP_129S1SvImJ_T0068384.1 MGP_129S1SvImJ_G0028900.1 mouse_genomes_project 4 135865341 135872730 + MGP_129S1SvImJ_P0068384 Gpn2 protein_coding protein_coding MGP_129S1SvImJ_T0068385.1 MGP_129S1SvImJ_G0028900.1 mouse_genomes_project 4 135865398 135872480 + MGP_129S1SvImJ_P0068385 Gpn2 protein_coding protein_coding MGP_129S1SvImJ_T0068386.1 MGP_129S1SvImJ_G0028900.1 mouse_genomes_project 4 135865407 135867139 + Gpn2 protein_coding processed_transcript MGP_129S1SvImJ_T0065811.1 MGP_129S1SvImJ_G0028315.1 mouse_genomes_project 4 55767246 55922872 - MGP_129S1SvImJ_P0065811 protein_coding protein_coding MGP_129S1SvImJ_T0065812.1 MGP_129S1SvImJ_G0028315.1 mouse_genomes_project 4 55770948 55805844 - MGP_129S1SvImJ_P0065812 protein_coding protein_coding MGP_129S1SvImJ_T0065813.1 MGP_129S1SvImJ_G0028315.1 mouse_genomes_project 4 55840845 55922872 - MGP_129S1SvImJ_P0065813 protein_coding protein_coding MGP_129S1SvImJ_T0065814.1 MGP_129S1SvImJ_G0028315.1 mouse_genomes_project 4 55842151 55849690 - protein_coding processed_transcript MGP_129S1SvImJ_T0065815.1 MGP_129S1SvImJ_G0028315.1 mouse_genomes_project 4 55852435 55882483 - protein_coding processed_transcript MGP_129S1SvImJ_T0065816.1 MGP_129S1SvImJ_G0028315.1 mouse_genomes_project 4 55857953 55917789 - protein_coding processed_transcript MGP_129S1SvImJ_T0065817.1 MGP_129S1SvImJ_G0028315.1 mouse_genomes_project 4 55867051 55899006 - protein_coding processed_transcript MGP_129S1SvImJ_T0066028.1 MGP_129S1SvImJ_G0028374.1 mouse_genomes_project 4 62862216 62896110 - MGP_129S1SvImJ_P0066028 Tnfsf8 protein_coding protein_coding MGP_129S1SvImJ_T0067853.1 MGP_129S1SvImJ_G0028790.1 mouse_genomes_project 4 128748541 128758455 + MGP_129S1SvImJ_P0067853 Sfpq protein_coding protein_coding MGP_129S1SvImJ_T0067854.1 MGP_129S1SvImJ_G0028790.1 mouse_genomes_project 4 128750600 128754535 + Sfpq protein_coding processed_transcript MGP_129S1SvImJ_T0067855.1 MGP_129S1SvImJ_G0028790.1 mouse_genomes_project 4 128750744 128764227 + Sfpq protein_coding processed_transcript MGP_129S1SvImJ_T0067856.1 MGP_129S1SvImJ_G0028790.1 mouse_genomes_project 4 128753142 128753833 + Sfpq protein_coding processed_transcript MGP_129S1SvImJ_T0067857.1 MGP_129S1SvImJ_G0028790.1 mouse_genomes_project 4 128753174 128755234 + Sfpq protein_coding processed_transcript MGP_129S1SvImJ_T0067858.1 MGP_129S1SvImJ_G0028790.1 mouse_genomes_project 4 128753663 128754768 + Sfpq protein_coding processed_transcript MGP_129S1SvImJ_T0014413.1 MGP_129S1SvImJ_G0012502.1 mouse_genomes_project 4 5535683 5536081 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066661.1 MGP_129S1SvImJ_G0028527.1 mouse_genomes_project 4 107387844 107447917 - MGP_129S1SvImJ_P0066661 Acot11 protein_coding protein_coding MGP_129S1SvImJ_T0066662.1 MGP_129S1SvImJ_G0028527.1 mouse_genomes_project 4 107390532 107453069 - MGP_129S1SvImJ_P0066662 Acot11 protein_coding protein_coding MGP_129S1SvImJ_T0066663.1 MGP_129S1SvImJ_G0028527.1 mouse_genomes_project 4 107390688 107414655 - MGP_129S1SvImJ_P0066663 Acot11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066664.1 MGP_129S1SvImJ_G0028527.1 mouse_genomes_project 4 107397011 107399258 - Acot11 protein_coding processed_transcript MGP_129S1SvImJ_T0066665.1 MGP_129S1SvImJ_G0028527.1 mouse_genomes_project 4 107405295 107447914 - MGP_129S1SvImJ_P0066665 Acot11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066666.1 MGP_129S1SvImJ_G0028527.1 mouse_genomes_project 4 107406703 107447861 - MGP_129S1SvImJ_P0066666 Acot11 protein_coding protein_coding MGP_129S1SvImJ_T0066667.1 MGP_129S1SvImJ_G0028527.1 mouse_genomes_project 4 107406746 107448320 - MGP_129S1SvImJ_P0066667 Acot11 protein_coding protein_coding MGP_129S1SvImJ_T0066325.1 MGP_129S1SvImJ_G0028449.1 mouse_genomes_project 4 94615957 94616490 + MGP_129S1SvImJ_P0066325 Gm10306 protein_coding protein_coding MGP_129S1SvImJ_T0014563.1 MGP_129S1SvImJ_G0012652.1 mouse_genomes_project 4 50667563 50667863 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068855.1 MGP_129S1SvImJ_G0029005.1 mouse_genomes_project 4 141663395 141667828 - MGP_129S1SvImJ_P0068855 Gm13030 protein_coding protein_coding MGP_129S1SvImJ_T0014601.1 MGP_129S1SvImJ_G0012690.1 mouse_genomes_project 4 64075838 64076196 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068856.1 MGP_129S1SvImJ_G0029006.1 mouse_genomes_project 4 141671771 141676647 + MGP_129S1SvImJ_P0068856 Pla2g2e protein_coding protein_coding MGP_129S1SvImJ_T0068857.1 MGP_129S1SvImJ_G0029006.1 mouse_genomes_project 4 141671800 141676352 + MGP_129S1SvImJ_P0068857 Pla2g2e protein_coding protein_coding MGP_129S1SvImJ_T0068858.1 MGP_129S1SvImJ_G0029006.1 mouse_genomes_project 4 141673189 141676647 + MGP_129S1SvImJ_P0068858 Pla2g2e protein_coding protein_coding MGP_129S1SvImJ_T0007822.1 MGP_129S1SvImJ_G0006394.1 mouse_genomes_project 4 17043149 17054870 - 4930598A11Rik lincRNA lincRNA MGP_129S1SvImJ_T0066323.1 MGP_129S1SvImJ_G0028448.1 mouse_genomes_project 4 94556733 94616208 - MGP_129S1SvImJ_P0066323 Caap1 protein_coding protein_coding MGP_129S1SvImJ_T0066324.1 MGP_129S1SvImJ_G0028448.1 mouse_genomes_project 4 94609091 94616178 - Caap1 protein_coding processed_transcript MGP_129S1SvImJ_T0014855.1 MGP_129S1SvImJ_G0012944.1 mouse_genomes_project 4 158287476 158288164 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014741.1 MGP_129S1SvImJ_G0012830.1 mouse_genomes_project 4 116288426 116288903 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067039.1 MGP_129S1SvImJ_G0028595.1 mouse_genomes_project 4 115857582 115862771 + MGP_129S1SvImJ_P0067039 Pdzk1ip1 protein_coding protein_coding MGP_129S1SvImJ_T0067040.1 MGP_129S1SvImJ_G0028595.1 mouse_genomes_project 4 115857582 115862771 + MGP_129S1SvImJ_P0067040 Pdzk1ip1 protein_coding protein_coding MGP_129S1SvImJ_T0067041.1 MGP_129S1SvImJ_G0028595.1 mouse_genomes_project 4 115857597 115862776 + MGP_129S1SvImJ_P0067041 Pdzk1ip1 protein_coding protein_coding MGP_129S1SvImJ_T0067042.1 MGP_129S1SvImJ_G0028595.1 mouse_genomes_project 4 115857597 115862776 + MGP_129S1SvImJ_P0067042 Pdzk1ip1 protein_coding protein_coding MGP_129S1SvImJ_T0067043.1 MGP_129S1SvImJ_G0028595.1 mouse_genomes_project 4 115857917 115860221 + Pdzk1ip1 protein_coding processed_transcript MGP_129S1SvImJ_T0067044.1 MGP_129S1SvImJ_G0028595.1 mouse_genomes_project 4 115859061 115862741 + Pdzk1ip1 protein_coding processed_transcript MGP_129S1SvImJ_T0067045.1 MGP_129S1SvImJ_G0028595.1 mouse_genomes_project 4 115859128 115860106 + Pdzk1ip1 protein_coding processed_transcript MGP_129S1SvImJ_T0067046.1 MGP_129S1SvImJ_G0028595.1 mouse_genomes_project 4 115859806 115862741 + Pdzk1ip1 protein_coding processed_transcript MGP_129S1SvImJ_T0004464.1 MGP_129S1SvImJ_G0003892.1 mouse_genomes_project 4 41890836 41894552 + antisense antisense MGP_129S1SvImJ_T0007872.1 MGP_129S1SvImJ_G0006437.1 mouse_genomes_project 4 57501224 57511379 - Gm12580 lincRNA lincRNA MGP_129S1SvImJ_T0014752.1 MGP_129S1SvImJ_G0012841.1 mouse_genomes_project 4 118505099 118505478 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010641.1 MGP_129S1SvImJ_G0008757.1 mouse_genomes_project 4 131177284 131177366 - Gm22994 miRNA miRNA MGP_129S1SvImJ_T0066535.1 MGP_129S1SvImJ_G0028499.1 mouse_genomes_project 4 102325173 102328623 + MGP_129S1SvImJ_P0066535 Gm12789 protein_coding protein_coding MGP_129S1SvImJ_T0066536.1 MGP_129S1SvImJ_G0028499.1 mouse_genomes_project 4 102325407 102327654 + Gm12789 protein_coding processed_transcript MGP_129S1SvImJ_T0066537.1 MGP_129S1SvImJ_G0028499.1 mouse_genomes_project 4 102326685 102328584 + MGP_129S1SvImJ_P0066537 Gm12789 protein_coding protein_coding MGP_129S1SvImJ_T0014825.1 MGP_129S1SvImJ_G0012914.1 mouse_genomes_project 4 140010246 140010624 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014600.1 MGP_129S1SvImJ_G0012689.1 mouse_genomes_project 4 63906836 63908050 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068955.1 MGP_129S1SvImJ_G0029033.1 mouse_genomes_project 4 143949912 143968983 + MGP_129S1SvImJ_P0068955 Sdhb protein_coding protein_coding MGP_129S1SvImJ_T0068956.1 MGP_129S1SvImJ_G0029033.1 mouse_genomes_project 4 143950110 143965204 + Sdhb protein_coding processed_transcript MGP_129S1SvImJ_T0068957.1 MGP_129S1SvImJ_G0029033.1 mouse_genomes_project 4 143950112 143962699 + Sdhb protein_coding processed_transcript MGP_129S1SvImJ_T0068952.1 MGP_129S1SvImJ_G0029032.1 mouse_genomes_project 4 143893199 143941281 + MGP_129S1SvImJ_P0068952 Padi2 protein_coding protein_coding MGP_129S1SvImJ_T0068953.1 MGP_129S1SvImJ_G0029032.1 mouse_genomes_project 4 143915548 143926374 + Padi2 protein_coding processed_transcript MGP_129S1SvImJ_T0068954.1 MGP_129S1SvImJ_G0029032.1 mouse_genomes_project 4 143935230 143938432 + Padi2 protein_coding processed_transcript MGP_129S1SvImJ_T0014558.1 MGP_129S1SvImJ_G0012647.1 mouse_genomes_project 4 47874454 47874785 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014531.1 MGP_129S1SvImJ_G0012620.1 mouse_genomes_project 4 37898923 37900811 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014579.1 MGP_129S1SvImJ_G0012668.1 mouse_genomes_project 4 53958506 53960301 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014534.1 MGP_129S1SvImJ_G0012623.1 mouse_genomes_project 4 38602441 38602838 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068526.1 MGP_129S1SvImJ_G0028929.1 mouse_genomes_project 4 136872400 136885271 + MGP_129S1SvImJ_P0068526 Aunip protein_coding protein_coding MGP_129S1SvImJ_T0067729.1 MGP_129S1SvImJ_G0028762.1 mouse_genomes_project 4 126635412 126649722 - MGP_129S1SvImJ_P0067729 Dnali1 protein_coding protein_coding MGP_129S1SvImJ_T0014578.1 MGP_129S1SvImJ_G0012667.1 mouse_genomes_project 4 53863238 53863847 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004586.1 MGP_129S1SvImJ_G0003986.1 mouse_genomes_project 4 144296687 144303619 - antisense antisense MGP_129S1SvImJ_T0065762.1 MGP_129S1SvImJ_G0028301.1 mouse_genomes_project 4 52355467 52413451 + MGP_129S1SvImJ_P0065762 Fktn protein_coding protein_coding MGP_129S1SvImJ_T0065763.1 MGP_129S1SvImJ_G0028301.1 mouse_genomes_project 4 52355632 52410453 + MGP_129S1SvImJ_P0065763 Fktn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065764.1 MGP_129S1SvImJ_G0028301.1 mouse_genomes_project 4 52361474 52410937 + MGP_129S1SvImJ_P0065764 Fktn protein_coding protein_coding MGP_129S1SvImJ_T0010652.1 MGP_129S1SvImJ_G0008768.1 mouse_genomes_project 4 136930762 136930891 - Mir6403 miRNA miRNA MGP_129S1SvImJ_T0014771.1 MGP_129S1SvImJ_G0012860.1 mouse_genomes_project 4 122691624 122691865 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068916.1 MGP_129S1SvImJ_G0029021.1 mouse_genomes_project 4 142469304 142497807 + MGP_129S1SvImJ_P0068916 Aldh4a1 protein_coding protein_coding MGP_129S1SvImJ_T0068917.1 MGP_129S1SvImJ_G0029021.1 mouse_genomes_project 4 142469332 142497804 + Aldh4a1 protein_coding processed_transcript MGP_129S1SvImJ_T0068918.1 MGP_129S1SvImJ_G0029021.1 mouse_genomes_project 4 142469547 142482030 + Aldh4a1 protein_coding processed_transcript MGP_129S1SvImJ_T0066968.1 MGP_129S1SvImJ_G0028578.1 mouse_genomes_project 4 112263603 112309017 + MGP_129S1SvImJ_P0066968 Bend5 protein_coding protein_coding MGP_129S1SvImJ_T0066969.1 MGP_129S1SvImJ_G0028578.1 mouse_genomes_project 4 112263644 112281836 + Bend5 protein_coding processed_transcript MGP_129S1SvImJ_T0066970.1 MGP_129S1SvImJ_G0028578.1 mouse_genomes_project 4 112263685 112308639 + Bend5 protein_coding processed_transcript MGP_129S1SvImJ_T0066971.1 MGP_129S1SvImJ_G0028578.1 mouse_genomes_project 4 112263804 112269140 + Bend5 protein_coding processed_transcript MGP_129S1SvImJ_T0066972.1 MGP_129S1SvImJ_G0028578.1 mouse_genomes_project 4 112281786 112309015 + MGP_129S1SvImJ_P0066972 Bend5 protein_coding protein_coding MGP_129S1SvImJ_T0066973.1 MGP_129S1SvImJ_G0028578.1 mouse_genomes_project 4 112281908 112308646 + Bend5 protein_coding processed_transcript MGP_129S1SvImJ_T0066942.1 MGP_129S1SvImJ_G0028573.1 mouse_genomes_project 4 110431643 110435894 - MGP_129S1SvImJ_P0066942 Cdkn2c protein_coding protein_coding MGP_129S1SvImJ_T0066943.1 MGP_129S1SvImJ_G0028573.1 mouse_genomes_project 4 110431643 110437711 - MGP_129S1SvImJ_P0066943 Cdkn2c protein_coding protein_coding MGP_129S1SvImJ_T0004640.1 MGP_129S1SvImJ_G0004024.1 mouse_genomes_project 4 160391805 160393594 - Gm16008 antisense antisense MGP_129S1SvImJ_T0004641.1 MGP_129S1SvImJ_G0004024.1 mouse_genomes_project 4 160393496 160401161 - Gm16008 antisense antisense MGP_129S1SvImJ_T0004642.1 MGP_129S1SvImJ_G0004024.1 mouse_genomes_project 4 160395833 160401140 - Gm16008 antisense antisense MGP_129S1SvImJ_T0068921.1 MGP_129S1SvImJ_G0029023.1 mouse_genomes_project 4 142589096 142697083 - MGP_129S1SvImJ_P0068921 Pax7 protein_coding protein_coding MGP_129S1SvImJ_T0068922.1 MGP_129S1SvImJ_G0029023.1 mouse_genomes_project 4 142592716 142696575 - MGP_129S1SvImJ_P0068922 Pax7 protein_coding protein_coding MGP_129S1SvImJ_T0068192.1 MGP_129S1SvImJ_G0028858.1 mouse_genomes_project 4 133949454 133980161 + MGP_129S1SvImJ_P0068192 Mecr protein_coding protein_coding MGP_129S1SvImJ_T0068193.1 MGP_129S1SvImJ_G0028858.1 mouse_genomes_project 4 133949477 133971256 + MGP_129S1SvImJ_P0068193 Mecr protein_coding protein_coding MGP_129S1SvImJ_T0068194.1 MGP_129S1SvImJ_G0028858.1 mouse_genomes_project 4 133949489 133949993 + Mecr protein_coding processed_transcript MGP_129S1SvImJ_T0068195.1 MGP_129S1SvImJ_G0028858.1 mouse_genomes_project 4 133964101 133971391 + Mecr protein_coding processed_transcript MGP_129S1SvImJ_T0068196.1 MGP_129S1SvImJ_G0028858.1 mouse_genomes_project 4 133964160 133968582 + Mecr protein_coding processed_transcript MGP_129S1SvImJ_T0068197.1 MGP_129S1SvImJ_G0028858.1 mouse_genomes_project 4 133968147 133977719 + Mecr protein_coding processed_transcript MGP_129S1SvImJ_T0068198.1 MGP_129S1SvImJ_G0028858.1 mouse_genomes_project 4 133968173 133980161 + Mecr protein_coding processed_transcript MGP_129S1SvImJ_T0068199.1 MGP_129S1SvImJ_G0028858.1 mouse_genomes_project 4 133970625 133977461 + Mecr protein_coding processed_transcript MGP_129S1SvImJ_T0068200.1 MGP_129S1SvImJ_G0028858.1 mouse_genomes_project 4 133972102 133979976 + Mecr protein_coding processed_transcript MGP_129S1SvImJ_T0068201.1 MGP_129S1SvImJ_G0028858.1 mouse_genomes_project 4 133977164 133980151 + Mecr protein_coding processed_transcript MGP_129S1SvImJ_T0068889.1 MGP_129S1SvImJ_G0029015.1 mouse_genomes_project 4 142136922 142145696 + MGP_129S1SvImJ_P0068889 Akr7a5 protein_coding protein_coding MGP_129S1SvImJ_T0068890.1 MGP_129S1SvImJ_G0029015.1 mouse_genomes_project 4 142143851 142144680 + Akr7a5 protein_coding processed_transcript MGP_129S1SvImJ_T0011604.1 MGP_129S1SvImJ_G0009720.1 mouse_genomes_project 4 135401176 135401464 - Gm24636 misc_RNA misc_RNA MGP_129S1SvImJ_T0069173.1 MGP_129S1SvImJ_G0029107.1 mouse_genomes_project 4 151535814 151545504 - MGP_129S1SvImJ_P0069173 Miip protein_coding protein_coding MGP_129S1SvImJ_T0069174.1 MGP_129S1SvImJ_G0029107.1 mouse_genomes_project 4 151535822 151545601 - MGP_129S1SvImJ_P0069174 Miip protein_coding protein_coding MGP_129S1SvImJ_T0069175.1 MGP_129S1SvImJ_G0029107.1 mouse_genomes_project 4 151535826 151537797 - Miip protein_coding retained_intron MGP_129S1SvImJ_T0069176.1 MGP_129S1SvImJ_G0029107.1 mouse_genomes_project 4 151535827 151545284 - Miip protein_coding retained_intron MGP_129S1SvImJ_T0069177.1 MGP_129S1SvImJ_G0029107.1 mouse_genomes_project 4 151535827 151545268 - MGP_129S1SvImJ_P0069177 Miip protein_coding protein_coding MGP_129S1SvImJ_T0069178.1 MGP_129S1SvImJ_G0029107.1 mouse_genomes_project 4 151537834 151545451 - Miip protein_coding retained_intron MGP_129S1SvImJ_T0069179.1 MGP_129S1SvImJ_G0029107.1 mouse_genomes_project 4 151538587 151542326 - Miip protein_coding retained_intron MGP_129S1SvImJ_T0069180.1 MGP_129S1SvImJ_G0029107.1 mouse_genomes_project 4 151542914 151545308 - Miip protein_coding retained_intron MGP_129S1SvImJ_T0067029.1 MGP_129S1SvImJ_G0028593.1 mouse_genomes_project 4 115766204 115812201 + MGP_129S1SvImJ_P0067029 Stil protein_coding protein_coding MGP_129S1SvImJ_T0067030.1 MGP_129S1SvImJ_G0028593.1 mouse_genomes_project 4 115766227 115808273 + MGP_129S1SvImJ_P0067030 Stil protein_coding protein_coding MGP_129S1SvImJ_T0067031.1 MGP_129S1SvImJ_G0028593.1 mouse_genomes_project 4 115766227 115812201 + MGP_129S1SvImJ_P0067031 Stil protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067032.1 MGP_129S1SvImJ_G0028593.1 mouse_genomes_project 4 115772794 115782283 + MGP_129S1SvImJ_P0067032 Stil protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067033.1 MGP_129S1SvImJ_G0028593.1 mouse_genomes_project 4 115776154 115791417 + Stil protein_coding processed_transcript MGP_129S1SvImJ_T0067034.1 MGP_129S1SvImJ_G0028593.1 mouse_genomes_project 4 115782217 115792974 + Stil protein_coding retained_intron MGP_129S1SvImJ_T0068393.1 MGP_129S1SvImJ_G0028903.1 mouse_genomes_project 4 135950751 135962942 - MGP_129S1SvImJ_P0068393 Pigv protein_coding protein_coding MGP_129S1SvImJ_T0068394.1 MGP_129S1SvImJ_G0028903.1 mouse_genomes_project 4 135952609 135962942 - MGP_129S1SvImJ_P0068394 Pigv protein_coding protein_coding MGP_129S1SvImJ_T0068395.1 MGP_129S1SvImJ_G0028903.1 mouse_genomes_project 4 135959042 135962942 - Pigv protein_coding processed_transcript MGP_129S1SvImJ_T0066110.1 MGP_129S1SvImJ_G0028396.1 mouse_genomes_project 4 80471281 80515419 + MGP_129S1SvImJ_P0066110 Lurap1l protein_coding protein_coding MGP_129S1SvImJ_T0067514.1 MGP_129S1SvImJ_G0028702.1 mouse_genomes_project 4 120740174 120781525 + MGP_129S1SvImJ_P0067514 Foxj3 protein_coding protein_coding MGP_129S1SvImJ_T0067515.1 MGP_129S1SvImJ_G0028702.1 mouse_genomes_project 4 120742831 120838749 + MGP_129S1SvImJ_P0067515 Foxj3 protein_coding protein_coding MGP_129S1SvImJ_T0067516.1 MGP_129S1SvImJ_G0028702.1 mouse_genomes_project 4 120742855 120801165 + MGP_129S1SvImJ_P0067516 Foxj3 protein_coding protein_coding MGP_129S1SvImJ_T0067517.1 MGP_129S1SvImJ_G0028702.1 mouse_genomes_project 4 120742858 120838749 + MGP_129S1SvImJ_P0067517 Foxj3 protein_coding protein_coding MGP_129S1SvImJ_T0067518.1 MGP_129S1SvImJ_G0028702.1 mouse_genomes_project 4 120742862 120813724 + Foxj3 protein_coding retained_intron MGP_129S1SvImJ_T0067519.1 MGP_129S1SvImJ_G0028702.1 mouse_genomes_project 4 120742868 120801174 + MGP_129S1SvImJ_P0067519 Foxj3 protein_coding protein_coding MGP_129S1SvImJ_T0067520.1 MGP_129S1SvImJ_G0028702.1 mouse_genomes_project 4 120742877 120770178 + Foxj3 protein_coding retained_intron MGP_129S1SvImJ_T0067521.1 MGP_129S1SvImJ_G0028702.1 mouse_genomes_project 4 120742949 120781552 + MGP_129S1SvImJ_P0067521 Foxj3 protein_coding protein_coding MGP_129S1SvImJ_T0067522.1 MGP_129S1SvImJ_G0028702.1 mouse_genomes_project 4 120743694 120781653 + MGP_129S1SvImJ_P0067522 Foxj3 protein_coding protein_coding MGP_129S1SvImJ_T0067523.1 MGP_129S1SvImJ_G0028702.1 mouse_genomes_project 4 120830107 120832178 + Foxj3 protein_coding processed_transcript MGP_129S1SvImJ_T0004600.1 MGP_129S1SvImJ_G0003995.1 mouse_genomes_project 4 147765929 147767363 + Pramef12os antisense antisense MGP_129S1SvImJ_T0014854.1 MGP_129S1SvImJ_G0012943.1 mouse_genomes_project 4 156826032 156826288 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066875.1 MGP_129S1SvImJ_G0028563.1 mouse_genomes_project 4 109603460 109604682 - MGP_129S1SvImJ_P0066875 A730015C16Rik protein_coding protein_coding MGP_129S1SvImJ_T0067594.1 MGP_129S1SvImJ_G0028723.1 mouse_genomes_project 4 122633665 122734833 - MGP_129S1SvImJ_P0067594 Gm12886 protein_coding protein_coding MGP_129S1SvImJ_T0014436.1 MGP_129S1SvImJ_G0012525.1 mouse_genomes_project 4 12615107 12615952 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069155.1 MGP_129S1SvImJ_G0029101.1 mouse_genomes_project 4 148339172 148576419 - MGP_129S1SvImJ_P0069155 Vps13d protein_coding protein_coding MGP_129S1SvImJ_T0069156.1 MGP_129S1SvImJ_G0029101.1 mouse_genomes_project 4 148339176 148572076 - MGP_129S1SvImJ_P0069156 Vps13d protein_coding protein_coding MGP_129S1SvImJ_T0069157.1 MGP_129S1SvImJ_G0029101.1 mouse_genomes_project 4 148339176 148463232 - MGP_129S1SvImJ_P0069157 Vps13d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069158.1 MGP_129S1SvImJ_G0029101.1 mouse_genomes_project 4 148341148 148532196 - MGP_129S1SvImJ_P0069158 Vps13d protein_coding protein_coding MGP_129S1SvImJ_T0069159.1 MGP_129S1SvImJ_G0029101.1 mouse_genomes_project 4 148341478 148351880 - Vps13d protein_coding processed_transcript MGP_129S1SvImJ_T0069160.1 MGP_129S1SvImJ_G0029101.1 mouse_genomes_project 4 148346856 148424241 - Vps13d protein_coding retained_intron MGP_129S1SvImJ_T0069161.1 MGP_129S1SvImJ_G0029101.1 mouse_genomes_project 4 148384880 148421130 - Vps13d protein_coding processed_transcript MGP_129S1SvImJ_T0069162.1 MGP_129S1SvImJ_G0029101.1 mouse_genomes_project 4 148423077 148429454 - Vps13d protein_coding retained_intron MGP_129S1SvImJ_T0069163.1 MGP_129S1SvImJ_G0029101.1 mouse_genomes_project 4 148441219 148443864 - Vps13d protein_coding retained_intron MGP_129S1SvImJ_T0069164.1 MGP_129S1SvImJ_G0029101.1 mouse_genomes_project 4 148554665 148576409 - Vps13d protein_coding retained_intron MGP_129S1SvImJ_T0014530.1 MGP_129S1SvImJ_G0012619.1 mouse_genomes_project 4 37720829 37721784 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065105.1 MGP_129S1SvImJ_G0028156.1 mouse_genomes_project 4 39062278 39124492 + MGP_129S1SvImJ_P0065105 Ube2r2 protein_coding protein_coding MGP_129S1SvImJ_T0065106.1 MGP_129S1SvImJ_G0028156.1 mouse_genomes_project 4 39112795 39121935 + Ube2r2 protein_coding retained_intron MGP_129S1SvImJ_T0065107.1 MGP_129S1SvImJ_G0028156.1 mouse_genomes_project 4 39120025 39122148 + Ube2r2 protein_coding retained_intron MGP_129S1SvImJ_T0067293.1 MGP_129S1SvImJ_G0028650.1 mouse_genomes_project 4 118244835 118486319 - MGP_129S1SvImJ_P0067293 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0067294.1 MGP_129S1SvImJ_G0028650.1 mouse_genomes_project 4 118250067 118259023 - protein_coding processed_transcript MGP_129S1SvImJ_T0067295.1 MGP_129S1SvImJ_G0028650.1 mouse_genomes_project 4 118250975 118265303 - MGP_129S1SvImJ_P0067295 protein_coding protein_coding MGP_129S1SvImJ_T0067296.1 MGP_129S1SvImJ_G0028650.1 mouse_genomes_project 4 118258640 118264915 - protein_coding processed_transcript MGP_129S1SvImJ_T0067297.1 MGP_129S1SvImJ_G0028650.1 mouse_genomes_project 4 118258927 118262660 - protein_coding processed_transcript MGP_129S1SvImJ_T0067298.1 MGP_129S1SvImJ_G0028650.1 mouse_genomes_project 4 118259437 118275487 - protein_coding processed_transcript MGP_129S1SvImJ_T0067299.1 MGP_129S1SvImJ_G0028650.1 mouse_genomes_project 4 118281520 118486500 - protein_coding processed_transcript MGP_129S1SvImJ_T0067300.1 MGP_129S1SvImJ_G0028650.1 mouse_genomes_project 4 118479801 118484585 - protein_coding processed_transcript MGP_129S1SvImJ_T0010583.1 MGP_129S1SvImJ_G0008699.1 mouse_genomes_project 4 7477475 7477606 - Mir3471-1 miRNA miRNA MGP_129S1SvImJ_T0066199.1 MGP_129S1SvImJ_G0028407.1 mouse_genomes_project 4 84529536 84811064 + MGP_129S1SvImJ_P0066199 Cntln protein_coding protein_coding MGP_129S1SvImJ_T0066200.1 MGP_129S1SvImJ_G0028407.1 mouse_genomes_project 4 84529631 84618545 + MGP_129S1SvImJ_P0066200 Cntln protein_coding protein_coding MGP_129S1SvImJ_T0066201.1 MGP_129S1SvImJ_G0028407.1 mouse_genomes_project 4 84529692 84811060 + MGP_129S1SvImJ_P0066201 Cntln protein_coding protein_coding MGP_129S1SvImJ_T0066202.1 MGP_129S1SvImJ_G0028407.1 mouse_genomes_project 4 84769881 84811061 + MGP_129S1SvImJ_P0066202 Cntln protein_coding protein_coding MGP_129S1SvImJ_T0065427.1 MGP_129S1SvImJ_G0028220.1 mouse_genomes_project 4 41792845 41801850 - MGP_129S1SvImJ_P0065427 Fam221b protein_coding protein_coding MGP_129S1SvImJ_T0065428.1 MGP_129S1SvImJ_G0028220.1 mouse_genomes_project 4 41796325 41801854 - Fam221b protein_coding retained_intron MGP_129S1SvImJ_T0064704.1 MGP_129S1SvImJ_G0028051.1 mouse_genomes_project 4 7911475 7959035 - MGP_129S1SvImJ_P0064704 Dpy19l4 protein_coding protein_coding MGP_129S1SvImJ_T0064705.1 MGP_129S1SvImJ_G0028051.1 mouse_genomes_project 4 7911475 7978656 - MGP_129S1SvImJ_P0064705 Dpy19l4 protein_coding protein_coding MGP_129S1SvImJ_T0064706.1 MGP_129S1SvImJ_G0028051.1 mouse_genomes_project 4 7927327 7978656 - MGP_129S1SvImJ_P0064706 Dpy19l4 protein_coding protein_coding MGP_129S1SvImJ_T0064707.1 MGP_129S1SvImJ_G0028051.1 mouse_genomes_project 4 7930466 7978594 - MGP_129S1SvImJ_P0064707 Dpy19l4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064708.1 MGP_129S1SvImJ_G0028051.1 mouse_genomes_project 4 7959096 7978566 - Dpy19l4 protein_coding processed_transcript MGP_129S1SvImJ_T0064709.1 MGP_129S1SvImJ_G0028051.1 mouse_genomes_project 4 7972789 7978619 - Dpy19l4 protein_coding processed_transcript MGP_129S1SvImJ_T0066263.1 MGP_129S1SvImJ_G0028419.1 mouse_genomes_project 4 87934074 87966483 + Focad protein_coding retained_intron MGP_129S1SvImJ_T0066264.1 MGP_129S1SvImJ_G0028419.1 mouse_genomes_project 4 87934075 88276755 + MGP_129S1SvImJ_P0066264 Focad protein_coding protein_coding MGP_129S1SvImJ_T0066265.1 MGP_129S1SvImJ_G0028419.1 mouse_genomes_project 4 87934090 88030035 + Focad protein_coding retained_intron MGP_129S1SvImJ_T0066266.1 MGP_129S1SvImJ_G0028419.1 mouse_genomes_project 4 87965969 88276753 + MGP_129S1SvImJ_P0066266 Focad protein_coding protein_coding MGP_129S1SvImJ_T0066267.1 MGP_129S1SvImJ_G0028419.1 mouse_genomes_project 4 87969106 87999272 + Focad protein_coding retained_intron MGP_129S1SvImJ_T0066268.1 MGP_129S1SvImJ_G0028419.1 mouse_genomes_project 4 88161760 88187876 + Focad protein_coding retained_intron MGP_129S1SvImJ_T0066269.1 MGP_129S1SvImJ_G0028419.1 mouse_genomes_project 4 88208416 88276758 + Focad protein_coding retained_intron MGP_129S1SvImJ_T0066271.1 MGP_129S1SvImJ_G0028419.1 mouse_genomes_project 4 88263354 88272968 + Focad protein_coding processed_transcript MGP_129S1SvImJ_T0066272.1 MGP_129S1SvImJ_G0028419.1 mouse_genomes_project 4 88263569 88276760 + MGP_129S1SvImJ_P0066272 Focad protein_coding protein_coding MGP_129S1SvImJ_T0068079.1 MGP_129S1SvImJ_G0028837.1 mouse_genomes_project 4 131618546 131639988 - MGP_129S1SvImJ_P0068079 Tmem39b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068080.1 MGP_129S1SvImJ_G0028837.1 mouse_genomes_project 4 131618546 131640030 - MGP_129S1SvImJ_P0068080 Tmem39b protein_coding protein_coding MGP_129S1SvImJ_T0068081.1 MGP_129S1SvImJ_G0028837.1 mouse_genomes_project 4 131618790 131621130 - Tmem39b protein_coding retained_intron MGP_129S1SvImJ_T0068082.1 MGP_129S1SvImJ_G0028837.1 mouse_genomes_project 4 131635126 131639812 - MGP_129S1SvImJ_P0068082 Tmem39b protein_coding protein_coding MGP_129S1SvImJ_T0068083.1 MGP_129S1SvImJ_G0028837.1 mouse_genomes_project 4 131635202 131639936 - MGP_129S1SvImJ_P0068083 Tmem39b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069771.1 MGP_129S1SvImJ_G0029215.1 mouse_genomes_project 4 159826104 159901693 + MGP_129S1SvImJ_P0069771 Gnb1 protein_coding protein_coding MGP_129S1SvImJ_T0069772.1 MGP_129S1SvImJ_G0029215.1 mouse_genomes_project 4 159826107 159901693 + MGP_129S1SvImJ_P0069772 Gnb1 protein_coding protein_coding MGP_129S1SvImJ_T0069773.1 MGP_129S1SvImJ_G0029215.1 mouse_genomes_project 4 159826113 159901693 + MGP_129S1SvImJ_P0069773 Gnb1 protein_coding protein_coding MGP_129S1SvImJ_T0069774.1 MGP_129S1SvImJ_G0029215.1 mouse_genomes_project 4 159827654 159884306 + MGP_129S1SvImJ_P0069774 Gnb1 protein_coding protein_coding MGP_129S1SvImJ_T0069775.1 MGP_129S1SvImJ_G0029215.1 mouse_genomes_project 4 159863719 159897570 + MGP_129S1SvImJ_P0069775 Gnb1 protein_coding protein_coding MGP_129S1SvImJ_T0069776.1 MGP_129S1SvImJ_G0029215.1 mouse_genomes_project 4 159863893 159882465 + Gnb1 protein_coding retained_intron MGP_129S1SvImJ_T0069777.1 MGP_129S1SvImJ_G0029215.1 mouse_genomes_project 4 159868871 159901691 + MGP_129S1SvImJ_P0069777 Gnb1 protein_coding protein_coding MGP_129S1SvImJ_T0069778.1 MGP_129S1SvImJ_G0029215.1 mouse_genomes_project 4 159884146 159897639 + Gnb1 protein_coding retained_intron MGP_129S1SvImJ_T0069779.1 MGP_129S1SvImJ_G0029215.1 mouse_genomes_project 4 159895657 159900087 + Gnb1 protein_coding retained_intron MGP_129S1SvImJ_T0008018.1 MGP_129S1SvImJ_G0006545.1 mouse_genomes_project 4 142802508 142823588 - 4933427I22Rik lincRNA lincRNA MGP_129S1SvImJ_T0008019.1 MGP_129S1SvImJ_G0006545.1 mouse_genomes_project 4 142803080 142813300 - 4933427I22Rik lincRNA lincRNA MGP_129S1SvImJ_T0014845.1 MGP_129S1SvImJ_G0012934.1 mouse_genomes_project 4 151782874 151783344 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065591.1 MGP_129S1SvImJ_G0028253.1 mouse_genomes_project 4 44420180 44455661 + MGP_129S1SvImJ_P0065591 Ncbp1 protein_coding protein_coding MGP_129S1SvImJ_T0065593.1 MGP_129S1SvImJ_G0028253.1 mouse_genomes_project 4 44441164 44443358 + Ncbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0065594.1 MGP_129S1SvImJ_G0028253.1 mouse_genomes_project 4 44448455 44455237 + Ncbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0014483.1 MGP_129S1SvImJ_G0012572.1 mouse_genomes_project 4 24381281 24392708 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014651.1 MGP_129S1SvImJ_G0012740.1 mouse_genomes_project 4 84045959 84046266 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011577.1 MGP_129S1SvImJ_G0009693.1 mouse_genomes_project 4 15719530 15719861 - Gm24419 misc_RNA misc_RNA MGP_129S1SvImJ_T0007816.1 MGP_129S1SvImJ_G0006389.1 mouse_genomes_project 4 9810026 9832474 + Gm11820 lincRNA lincRNA MGP_129S1SvImJ_T0066940.1 MGP_129S1SvImJ_G0028572.1 mouse_genomes_project 4 110281548 110307135 - MGP_129S1SvImJ_P0066940 4930522H14Rik protein_coding protein_coding MGP_129S1SvImJ_T0066941.1 MGP_129S1SvImJ_G0028572.1 mouse_genomes_project 4 110281576 110307042 - MGP_129S1SvImJ_P0066941 4930522H14Rik protein_coding protein_coding MGP_129S1SvImJ_T0102524.1 MGP_129S1SvImJ_G0040357.1 mouse_genomes_project 4 88560326 88560834 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0014648.1 MGP_129S1SvImJ_G0012737.1 mouse_genomes_project 4 83103709 83103972 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068074.1 MGP_129S1SvImJ_G0028836.1 mouse_genomes_project 4 131581317 131614970 - MGP_129S1SvImJ_P0068074 Kpna6 protein_coding protein_coding MGP_129S1SvImJ_T0068075.1 MGP_129S1SvImJ_G0028836.1 mouse_genomes_project 4 131591005 131592286 - Kpna6 protein_coding retained_intron MGP_129S1SvImJ_T0068076.1 MGP_129S1SvImJ_G0028836.1 mouse_genomes_project 4 131591653 131594091 - Kpna6 protein_coding retained_intron MGP_129S1SvImJ_T0068077.1 MGP_129S1SvImJ_G0028836.1 mouse_genomes_project 4 131594811 131614730 - MGP_129S1SvImJ_P0068077 Kpna6 protein_coding protein_coding MGP_129S1SvImJ_T0068078.1 MGP_129S1SvImJ_G0028836.1 mouse_genomes_project 4 131600617 131614969 - Kpna6 protein_coding retained_intron MGP_129S1SvImJ_T0099894.1 MGP_129S1SvImJ_G0037961.1 mouse_genomes_project 4 160075061 160075163 - Gm22573 snRNA snRNA MGP_129S1SvImJ_T0068943.1 MGP_129S1SvImJ_G0029028.1 mouse_genomes_project 4 143692726 143712493 - MGP_129S1SvImJ_P0068943 Padi6 protein_coding protein_coding MGP_129S1SvImJ_T0068944.1 MGP_129S1SvImJ_G0029028.1 mouse_genomes_project 4 143697551 143698272 - Padi6 protein_coding processed_transcript MGP_129S1SvImJ_T0068945.1 MGP_129S1SvImJ_G0029028.1 mouse_genomes_project 4 143705515 143711447 - MGP_129S1SvImJ_P0068945 Padi6 protein_coding protein_coding MGP_129S1SvImJ_T0008023.1 MGP_129S1SvImJ_G0006549.1 mouse_genomes_project 4 143362939 143387719 + Gm13026 lincRNA lincRNA MGP_129S1SvImJ_T0065225.1 MGP_129S1SvImJ_G0028193.1 mouse_genomes_project 4 40989696 41010727 + Phf24 protein_coding processed_transcript MGP_129S1SvImJ_T0065226.1 MGP_129S1SvImJ_G0028193.1 mouse_genomes_project 4 40989717 41006710 + MGP_129S1SvImJ_P0065226 Phf24 protein_coding protein_coding MGP_129S1SvImJ_T0065227.1 MGP_129S1SvImJ_G0028193.1 mouse_genomes_project 4 40989730 41017579 + MGP_129S1SvImJ_P0065227 Phf24 protein_coding protein_coding MGP_129S1SvImJ_T0065228.1 MGP_129S1SvImJ_G0028193.1 mouse_genomes_project 4 40990287 41017579 + MGP_129S1SvImJ_P0065228 Phf24 protein_coding protein_coding MGP_129S1SvImJ_T0065229.1 MGP_129S1SvImJ_G0028193.1 mouse_genomes_project 4 40990306 41017579 + MGP_129S1SvImJ_P0065229 Phf24 protein_coding protein_coding MGP_129S1SvImJ_T0065230.1 MGP_129S1SvImJ_G0028193.1 mouse_genomes_project 4 40990370 41013184 + MGP_129S1SvImJ_P0065230 Phf24 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065231.1 MGP_129S1SvImJ_G0028193.1 mouse_genomes_project 4 40995274 41006676 + MGP_129S1SvImJ_P0065231 Phf24 protein_coding protein_coding MGP_129S1SvImJ_T0065232.1 MGP_129S1SvImJ_G0028193.1 mouse_genomes_project 4 41006797 41012340 + MGP_129S1SvImJ_P0065232 Phf24 protein_coding protein_coding MGP_129S1SvImJ_T0065233.1 MGP_129S1SvImJ_G0028193.1 mouse_genomes_project 4 41011080 41012660 + MGP_129S1SvImJ_P0065233 Phf24 protein_coding protein_coding MGP_129S1SvImJ_T0069248.1 MGP_129S1SvImJ_G0029126.1 mouse_genomes_project 4 152295942 152319811 + MGP_129S1SvImJ_P0069248 Exosc10 protein_coding protein_coding MGP_129S1SvImJ_T0069249.1 MGP_129S1SvImJ_G0029126.1 mouse_genomes_project 4 152295944 152319800 + Exosc10 protein_coding processed_transcript MGP_129S1SvImJ_T0069250.1 MGP_129S1SvImJ_G0029126.1 mouse_genomes_project 4 152295968 152319803 + MGP_129S1SvImJ_P0069250 Exosc10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069251.1 MGP_129S1SvImJ_G0029126.1 mouse_genomes_project 4 152295975 152319811 + MGP_129S1SvImJ_P0069251 Exosc10 protein_coding protein_coding MGP_129S1SvImJ_T0069252.1 MGP_129S1SvImJ_G0029126.1 mouse_genomes_project 4 152300420 152301511 + MGP_129S1SvImJ_P0069252 Exosc10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069253.1 MGP_129S1SvImJ_G0029126.1 mouse_genomes_project 4 152303697 152313977 + Exosc10 protein_coding retained_intron MGP_129S1SvImJ_T0069254.1 MGP_129S1SvImJ_G0029126.1 mouse_genomes_project 4 152305761 152313867 + Exosc10 protein_coding retained_intron MGP_129S1SvImJ_T0069255.1 MGP_129S1SvImJ_G0029126.1 mouse_genomes_project 4 152313530 152319731 + Exosc10 protein_coding processed_transcript MGP_129S1SvImJ_T0068095.1 MGP_129S1SvImJ_G0028840.1 mouse_genomes_project 4 131908159 131935729 + MGP_129S1SvImJ_P0068095 Spocd1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0068096.1 MGP_129S1SvImJ_G0028840.1 mouse_genomes_project 4 131926397 131932315 + MGP_129S1SvImJ_P0068096 Spocd1 protein_coding protein_coding MGP_129S1SvImJ_T0068097.1 MGP_129S1SvImJ_G0028840.1 mouse_genomes_project 4 131926571 131935851 + MGP_129S1SvImJ_P0068097 Spocd1 protein_coding protein_coding MGP_129S1SvImJ_T0069467.1 MGP_129S1SvImJ_G0029163.1 mouse_genomes_project 4 155120501 155122375 + MGP_129S1SvImJ_P0069467 Gm13090 protein_coding protein_coding MGP_129S1SvImJ_T0018095.1 MGP_129S1SvImJ_G0015555.1 mouse_genomes_project 4 89329052 89349925 + Gm12609 processed_transcript processed_transcript MGP_129S1SvImJ_T0066602.1 MGP_129S1SvImJ_G0028508.1 mouse_genomes_project 4 103731741 103792108 + MGP_129S1SvImJ_P0066602 Oma1 protein_coding protein_coding MGP_129S1SvImJ_T0066603.1 MGP_129S1SvImJ_G0028508.1 mouse_genomes_project 4 103745715 103752961 + Oma1 protein_coding processed_transcript MGP_129S1SvImJ_T0066604.1 MGP_129S1SvImJ_G0028508.1 mouse_genomes_project 4 103752979 103797533 + Oma1 protein_coding processed_transcript MGP_129S1SvImJ_T0067887.1 MGP_129S1SvImJ_G0028801.1 mouse_genomes_project 4 129778663 130145051 + Csmd2 protein_coding processed_transcript MGP_129S1SvImJ_T0067888.1 MGP_129S1SvImJ_G0028801.1 mouse_genomes_project 4 129778847 130227935 + Csmd2 protein_coding retained_intron MGP_129S1SvImJ_T0067889.1 MGP_129S1SvImJ_G0028801.1 mouse_genomes_project 4 129778873 130373684 + MGP_129S1SvImJ_P0067889 Csmd2 protein_coding protein_coding MGP_129S1SvImJ_T0067891.1 MGP_129S1SvImJ_G0028801.1 mouse_genomes_project 4 130279058 130307376 + Csmd2 protein_coding processed_transcript MGP_129S1SvImJ_T0067892.1 MGP_129S1SvImJ_G0028801.1 mouse_genomes_project 4 130325705 130334520 + Csmd2 protein_coding processed_transcript MGP_129S1SvImJ_T0067893.1 MGP_129S1SvImJ_G0028801.1 mouse_genomes_project 4 130354008 130358807 + Csmd2 protein_coding processed_transcript MGP_129S1SvImJ_T0065348.1 MGP_129S1SvImJ_G0028208.1 mouse_genomes_project 4 41610605 41611911 + Ccdc107 protein_coding processed_transcript MGP_129S1SvImJ_T0065349.1 MGP_129S1SvImJ_G0028208.1 mouse_genomes_project 4 41611067 41613627 + MGP_129S1SvImJ_P0065349 Ccdc107 protein_coding protein_coding MGP_129S1SvImJ_T0065350.1 MGP_129S1SvImJ_G0028208.1 mouse_genomes_project 4 41611082 41611516 + Ccdc107 protein_coding processed_transcript MGP_129S1SvImJ_T0065351.1 MGP_129S1SvImJ_G0028208.1 mouse_genomes_project 4 41611094 41613627 + MGP_129S1SvImJ_P0065351 Ccdc107 protein_coding protein_coding MGP_129S1SvImJ_T0065352.1 MGP_129S1SvImJ_G0028208.1 mouse_genomes_project 4 41611122 41613570 + Ccdc107 protein_coding processed_transcript MGP_129S1SvImJ_T0065353.1 MGP_129S1SvImJ_G0028208.1 mouse_genomes_project 4 41611122 41613577 + Ccdc107 protein_coding processed_transcript MGP_129S1SvImJ_T0014590.1 MGP_129S1SvImJ_G0012679.1 mouse_genomes_project 4 57964610 57965355 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067618.1 MGP_129S1SvImJ_G0028731.1 mouse_genomes_project 4 124408132 124453113 + Trit1 protein_coding processed_transcript MGP_129S1SvImJ_T0067619.1 MGP_129S1SvImJ_G0028731.1 mouse_genomes_project 4 124408132 124453113 + MGP_129S1SvImJ_P0067619 Trit1 protein_coding protein_coding MGP_129S1SvImJ_T0067620.1 MGP_129S1SvImJ_G0028731.1 mouse_genomes_project 4 124446919 124452367 + Trit1 protein_coding processed_transcript MGP_129S1SvImJ_T0069425.1 MGP_129S1SvImJ_G0029155.1 mouse_genomes_project 4 154614037 154639400 - MGP_129S1SvImJ_P0069425 Slc45a1 protein_coding protein_coding MGP_129S1SvImJ_T0069426.1 MGP_129S1SvImJ_G0029155.1 mouse_genomes_project 4 154615512 154639323 - MGP_129S1SvImJ_P0069426 Slc45a1 protein_coding protein_coding MGP_129S1SvImJ_T0069427.1 MGP_129S1SvImJ_G0029155.1 mouse_genomes_project 4 154630665 154631466 - Slc45a1 protein_coding retained_intron MGP_129S1SvImJ_T0014753.1 MGP_129S1SvImJ_G0012842.1 mouse_genomes_project 4 118752637 118752960 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014511.1 MGP_129S1SvImJ_G0012600.1 mouse_genomes_project 4 31958743 31959554 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014779.1 MGP_129S1SvImJ_G0012868.1 mouse_genomes_project 4 124884528 124884846 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069696.1 MGP_129S1SvImJ_G0029204.1 mouse_genomes_project 4 159251067 159267815 + MGP_129S1SvImJ_P0069696 Pank4 protein_coding protein_coding MGP_129S1SvImJ_T0069697.1 MGP_129S1SvImJ_G0029204.1 mouse_genomes_project 4 159251077 159267882 + MGP_129S1SvImJ_P0069697 Pank4 protein_coding protein_coding MGP_129S1SvImJ_T0069698.1 MGP_129S1SvImJ_G0029204.1 mouse_genomes_project 4 159256947 159267833 + MGP_129S1SvImJ_P0069698 Pank4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069699.1 MGP_129S1SvImJ_G0029204.1 mouse_genomes_project 4 159261481 159267882 + Pank4 protein_coding retained_intron MGP_129S1SvImJ_T0069700.1 MGP_129S1SvImJ_G0029204.1 mouse_genomes_project 4 159263215 159266099 + Pank4 protein_coding retained_intron MGP_129S1SvImJ_T0069701.1 MGP_129S1SvImJ_G0029204.1 mouse_genomes_project 4 159263223 159266169 + Pank4 protein_coding retained_intron MGP_129S1SvImJ_T0069702.1 MGP_129S1SvImJ_G0029204.1 mouse_genomes_project 4 159263522 159267878 + Pank4 protein_coding retained_intron MGP_129S1SvImJ_T0066270.1 MGP_129S1SvImJ_G0028420.1 mouse_genomes_project 4 88257847 88304696 - MGP_129S1SvImJ_P0066270 Hacd4 protein_coding protein_coding MGP_129S1SvImJ_T0066273.1 MGP_129S1SvImJ_G0028420.1 mouse_genomes_project 4 88276089 88304709 - MGP_129S1SvImJ_P0066273 Hacd4 protein_coding protein_coding MGP_129S1SvImJ_T0066274.1 MGP_129S1SvImJ_G0028420.1 mouse_genomes_project 4 88278678 88304707 - MGP_129S1SvImJ_P0066274 Hacd4 protein_coding protein_coding MGP_129S1SvImJ_T0014538.1 MGP_129S1SvImJ_G0012627.1 mouse_genomes_project 4 41931033 41932398 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004489.1 MGP_129S1SvImJ_G0003915.1 mouse_genomes_project 4 87875481 87876979 + Gm12631 antisense antisense MGP_129S1SvImJ_T0007881.1 MGP_129S1SvImJ_G0006446.1 mouse_genomes_project 4 67468045 67477319 - Gm12911 lincRNA lincRNA MGP_129S1SvImJ_T0010640.1 MGP_129S1SvImJ_G0008756.1 mouse_genomes_project 4 128251430 128251489 + Mir7119 miRNA miRNA MGP_129S1SvImJ_T0007842.1 MGP_129S1SvImJ_G0006414.1 mouse_genomes_project 4 41128071 41135297 + Gm26881 lincRNA lincRNA MGP_129S1SvImJ_T0069924.1 MGP_129S1SvImJ_G0029246.1 mouse_genomes_project 4 160490075 160508446 + MGP_129S1SvImJ_P0069924 9430015G10Rik protein_coding protein_coding MGP_129S1SvImJ_T0069925.1 MGP_129S1SvImJ_G0029246.1 mouse_genomes_project 4 160490078 160508446 + 9430015G10Rik protein_coding processed_transcript MGP_129S1SvImJ_T0069926.1 MGP_129S1SvImJ_G0029246.1 mouse_genomes_project 4 160490091 160508444 + MGP_129S1SvImJ_P0069926 9430015G10Rik protein_coding protein_coding MGP_129S1SvImJ_T0069927.1 MGP_129S1SvImJ_G0029246.1 mouse_genomes_project 4 160490092 160507400 + MGP_129S1SvImJ_P0069927 9430015G10Rik protein_coding protein_coding MGP_129S1SvImJ_T0069928.1 MGP_129S1SvImJ_G0029246.1 mouse_genomes_project 4 160490112 160503358 + 9430015G10Rik protein_coding processed_transcript MGP_129S1SvImJ_T0069929.1 MGP_129S1SvImJ_G0029246.1 mouse_genomes_project 4 160490123 160503592 + 9430015G10Rik protein_coding processed_transcript MGP_129S1SvImJ_T0069930.1 MGP_129S1SvImJ_G0029246.1 mouse_genomes_project 4 160490132 160496652 + 9430015G10Rik protein_coding processed_transcript MGP_129S1SvImJ_T0069931.1 MGP_129S1SvImJ_G0029246.1 mouse_genomes_project 4 160493985 160500697 + 9430015G10Rik protein_coding processed_transcript MGP_129S1SvImJ_T0065804.1 MGP_129S1SvImJ_G0028313.1 mouse_genomes_project 4 55640691 55721118 - MGP_129S1SvImJ_P0065804 Tmem245 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0065805.1 MGP_129S1SvImJ_G0028313.1 mouse_genomes_project 4 55644374 55710317 - Tmem245 protein_coding processed_transcript MGP_129S1SvImJ_T0065806.1 MGP_129S1SvImJ_G0028313.1 mouse_genomes_project 4 55644374 55695898 - MGP_129S1SvImJ_P0065806 Tmem245 protein_coding protein_coding MGP_129S1SvImJ_T0065807.1 MGP_129S1SvImJ_G0028313.1 mouse_genomes_project 4 55644745 55721088 - MGP_129S1SvImJ_P0065807 Tmem245 protein_coding protein_coding MGP_129S1SvImJ_T0065808.1 MGP_129S1SvImJ_G0028313.1 mouse_genomes_project 4 55650189 55721101 - Tmem245 protein_coding processed_transcript MGP_129S1SvImJ_T0014650.1 MGP_129S1SvImJ_G0012739.1 mouse_genomes_project 4 83306369 83307168 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067061.1 MGP_129S1SvImJ_G0028605.1 mouse_genomes_project 4 116459120 116475901 - MGP_129S1SvImJ_P0067061 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067062.1 MGP_129S1SvImJ_G0028605.1 mouse_genomes_project 4 116459120 116483029 - MGP_129S1SvImJ_P0067062 protein_coding protein_coding MGP_129S1SvImJ_T0067063.1 MGP_129S1SvImJ_G0028605.1 mouse_genomes_project 4 116460043 116477300 - MGP_129S1SvImJ_P0067063 protein_coding protein_coding MGP_129S1SvImJ_T0067064.1 MGP_129S1SvImJ_G0028605.1 mouse_genomes_project 4 116460118 116482993 - MGP_129S1SvImJ_P0067064 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0067065.1 MGP_129S1SvImJ_G0028605.1 mouse_genomes_project 4 116462868 116470316 - protein_coding retained_intron MGP_129S1SvImJ_T0014710.1 MGP_129S1SvImJ_G0012799.1 mouse_genomes_project 4 104423085 104423326 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004458.1 MGP_129S1SvImJ_G0003887.1 mouse_genomes_project 4 39595403 39597442 + Gm12406 antisense antisense MGP_129S1SvImJ_T0064941.1 MGP_129S1SvImJ_G0028113.1 mouse_genomes_project 4 30269080 30271496 + MGP_129S1SvImJ_P0064941 Lyrm2 protein_coding protein_coding MGP_129S1SvImJ_T0064942.1 MGP_129S1SvImJ_G0028113.1 mouse_genomes_project 4 30269106 30271672 + Lyrm2 protein_coding retained_intron MGP_129S1SvImJ_T0064943.1 MGP_129S1SvImJ_G0028113.1 mouse_genomes_project 4 30269109 30271088 + Lyrm2 protein_coding retained_intron MGP_129S1SvImJ_T0066627.1 MGP_129S1SvImJ_G0028517.1 mouse_genomes_project 4 106924775 107053115 + MGP_129S1SvImJ_P0066627 Usp24 protein_coding protein_coding MGP_129S1SvImJ_T0066628.1 MGP_129S1SvImJ_G0028517.1 mouse_genomes_project 4 106924782 106971246 + Usp24 protein_coding retained_intron MGP_129S1SvImJ_T0066629.1 MGP_129S1SvImJ_G0028517.1 mouse_genomes_project 4 106924796 107053120 + MGP_129S1SvImJ_P0066629 Usp24 protein_coding protein_coding MGP_129S1SvImJ_T0066630.1 MGP_129S1SvImJ_G0028517.1 mouse_genomes_project 4 107040293 107042653 + Usp24 protein_coding processed_transcript MGP_129S1SvImJ_T0014759.1 MGP_129S1SvImJ_G0012848.1 mouse_genomes_project 4 120150302 120151308 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067124.1 MGP_129S1SvImJ_G0028618.1 mouse_genomes_project 4 116943568 116949362 - Rad54l protein_coding processed_transcript MGP_129S1SvImJ_T0067125.1 MGP_129S1SvImJ_G0028618.1 mouse_genomes_project 4 116946219 116974824 - MGP_129S1SvImJ_P0067125 Rad54l protein_coding protein_coding MGP_129S1SvImJ_T0067126.1 MGP_129S1SvImJ_G0028618.1 mouse_genomes_project 4 116946278 116974798 - MGP_129S1SvImJ_P0067126 Rad54l protein_coding protein_coding MGP_129S1SvImJ_T0067127.1 MGP_129S1SvImJ_G0028618.1 mouse_genomes_project 4 116959048 116974121 - Rad54l protein_coding processed_transcript MGP_129S1SvImJ_T0067128.1 MGP_129S1SvImJ_G0028618.1 mouse_genomes_project 4 116960347 116961843 - Rad54l protein_coding processed_transcript MGP_129S1SvImJ_T0067129.1 MGP_129S1SvImJ_G0028618.1 mouse_genomes_project 4 116966711 116974829 - Rad54l protein_coding processed_transcript MGP_129S1SvImJ_T0101703.1 MGP_129S1SvImJ_G0039712.1 mouse_genomes_project 4 6558067 6559500 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101704.1 MGP_129S1SvImJ_G0039712.1 mouse_genomes_project 4 6558740 6559738 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0067621.1 MGP_129S1SvImJ_G0028732.1 mouse_genomes_project 4 124511781 124548035 + MGP_129S1SvImJ_P0067621 Bmp8b protein_coding protein_coding MGP_129S1SvImJ_T0067624.1 MGP_129S1SvImJ_G0028732.1 mouse_genomes_project 4 124540041 124553878 + Bmp8b protein_coding processed_transcript MGP_129S1SvImJ_T0014477.1 MGP_129S1SvImJ_G0012566.1 mouse_genomes_project 4 22972810 22973195 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101098.1 MGP_129S1SvImJ_G0039165.1 mouse_genomes_project 4 31216238 31216363 - Gm24341 snoRNA snoRNA MGP_129S1SvImJ_T0065690.1 MGP_129S1SvImJ_G0028279.1 mouse_genomes_project 4 47839969 47870376 - MGP_129S1SvImJ_P0065690 Acnat2 protein_coding protein_coding MGP_129S1SvImJ_T0065692.1 MGP_129S1SvImJ_G0028279.1 mouse_genomes_project 4 47841596 47868267 - MGP_129S1SvImJ_P0065692 Acnat2 protein_coding protein_coding MGP_129S1SvImJ_T0065693.1 MGP_129S1SvImJ_G0028279.1 mouse_genomes_project 4 47845017 47868252 - Acnat2 protein_coding processed_transcript MGP_129S1SvImJ_T0014621.1 MGP_129S1SvImJ_G0012710.1 mouse_genomes_project 4 73499476 73504012 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014654.1 MGP_129S1SvImJ_G0012743.1 mouse_genomes_project 4 84857382 84857785 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069428.1 MGP_129S1SvImJ_G0029156.1 mouse_genomes_project 4 154879011 154893766 + MGP_129S1SvImJ_P0069428 Errfi1 protein_coding protein_coding MGP_129S1SvImJ_T0069429.1 MGP_129S1SvImJ_G0029156.1 mouse_genomes_project 4 154880147 154880898 + Errfi1 protein_coding processed_transcript MGP_129S1SvImJ_T0069430.1 MGP_129S1SvImJ_G0029156.1 mouse_genomes_project 4 154880147 154893761 + MGP_129S1SvImJ_P0069430 Errfi1 protein_coding protein_coding MGP_129S1SvImJ_T0010673.1 MGP_129S1SvImJ_G0008789.1 mouse_genomes_project 4 157185408 157185503 - Gm25779 miRNA miRNA MGP_129S1SvImJ_T0014466.1 MGP_129S1SvImJ_G0012555.1 mouse_genomes_project 4 19897843 19899245 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004574.1 MGP_129S1SvImJ_G0003976.1 mouse_genomes_project 4 140062007 140063824 - Gm13010 antisense antisense MGP_129S1SvImJ_T0064648.1 MGP_129S1SvImJ_G0028042.1 mouse_genomes_project 4 6079031 6104925 - Asph protein_coding processed_transcript MGP_129S1SvImJ_T0064649.1 MGP_129S1SvImJ_G0028042.1 mouse_genomes_project 4 6080041 6302565 - MGP_129S1SvImJ_P0064649 Asph protein_coding protein_coding MGP_129S1SvImJ_T0064650.1 MGP_129S1SvImJ_G0028042.1 mouse_genomes_project 4 6080041 6302565 - MGP_129S1SvImJ_P0064650 Asph protein_coding protein_coding MGP_129S1SvImJ_T0064651.1 MGP_129S1SvImJ_G0028042.1 mouse_genomes_project 4 6080041 6302747 - MGP_129S1SvImJ_P0064651 Asph protein_coding protein_coding MGP_129S1SvImJ_T0064652.1 MGP_129S1SvImJ_G0028042.1 mouse_genomes_project 4 6209904 6224715 - Asph protein_coding processed_transcript MGP_129S1SvImJ_T0064653.1 MGP_129S1SvImJ_G0028042.1 mouse_genomes_project 4 6210297 6243358 - MGP_129S1SvImJ_P0064653 Asph protein_coding unknown_likely_coding MGP_129S1SvImJ_T0064654.1 MGP_129S1SvImJ_G0028042.1 mouse_genomes_project 4 6210303 6275239 - MGP_129S1SvImJ_P0064654 Asph protein_coding protein_coding MGP_129S1SvImJ_T0064655.1 MGP_129S1SvImJ_G0028042.1 mouse_genomes_project 4 6210303 6275239 - MGP_129S1SvImJ_P0064655 Asph protein_coding protein_coding MGP_129S1SvImJ_T0064656.1 MGP_129S1SvImJ_G0028042.1 mouse_genomes_project 4 6210303 6275239 - MGP_129S1SvImJ_P0064656 Asph protein_coding protein_coding MGP_129S1SvImJ_T0064657.1 MGP_129S1SvImJ_G0028042.1 mouse_genomes_project 4 6210303 6302565 - MGP_129S1SvImJ_P0064657 Asph protein_coding protein_coding MGP_129S1SvImJ_T0064658.1 MGP_129S1SvImJ_G0028042.1 mouse_genomes_project 4 6210303 6302565 - MGP_129S1SvImJ_P0064658 Asph protein_coding protein_coding MGP_129S1SvImJ_T0064659.1 MGP_129S1SvImJ_G0028042.1 mouse_genomes_project 4 6235062 6270786 - Asph protein_coding processed_transcript MGP_129S1SvImJ_T0064660.1 MGP_129S1SvImJ_G0028042.1 mouse_genomes_project 4 6238357 6275239 - MGP_129S1SvImJ_P0064660 Asph protein_coding protein_coding MGP_129S1SvImJ_T0064661.1 MGP_129S1SvImJ_G0028042.1 mouse_genomes_project 4 6241355 6302565 - MGP_129S1SvImJ_P0064661 Asph protein_coding protein_coding MGP_129S1SvImJ_T0064662.1 MGP_129S1SvImJ_G0028042.1 mouse_genomes_project 4 6251275 6275239 - MGP_129S1SvImJ_P0064662 Asph protein_coding protein_coding MGP_129S1SvImJ_T0064663.1 MGP_129S1SvImJ_G0028042.1 mouse_genomes_project 4 6252062 6302565 - MGP_129S1SvImJ_P0064663 Asph protein_coding protein_coding MGP_129S1SvImJ_T0064664.1 MGP_129S1SvImJ_G0028042.1 mouse_genomes_project 4 6259390 6302565 - MGP_129S1SvImJ_P0064664 Asph protein_coding protein_coding MGP_129S1SvImJ_T0064665.1 MGP_129S1SvImJ_G0028042.1 mouse_genomes_project 4 6260916 6302565 - MGP_129S1SvImJ_P0064665 Asph protein_coding protein_coding MGP_129S1SvImJ_T0064666.1 MGP_129S1SvImJ_G0028042.1 mouse_genomes_project 4 6261295 6302724 - MGP_129S1SvImJ_P0064666 Asph protein_coding protein_coding MGP_129S1SvImJ_T0064667.1 MGP_129S1SvImJ_G0028042.1 mouse_genomes_project 4 6263485 6275239 - Asph protein_coding processed_transcript MGP_129S1SvImJ_T0064668.1 MGP_129S1SvImJ_G0028042.1 mouse_genomes_project 4 6301715 6302489 - Asph protein_coding processed_transcript MGP_129S1SvImJ_T0068551.1 MGP_129S1SvImJ_G0028937.1 mouse_genomes_project 4 137313185 137317266 + Rsrp1 protein_coding retained_intron MGP_129S1SvImJ_T0068552.1 MGP_129S1SvImJ_G0028937.1 mouse_genomes_project 4 137313185 137317266 + MGP_129S1SvImJ_P0068552 Rsrp1 protein_coding protein_coding MGP_129S1SvImJ_T0068553.1 MGP_129S1SvImJ_G0028937.1 mouse_genomes_project 4 137313186 137315017 + Rsrp1 protein_coding processed_transcript MGP_129S1SvImJ_T0068554.1 MGP_129S1SvImJ_G0028937.1 mouse_genomes_project 4 137313219 137314927 + Rsrp1 protein_coding processed_transcript MGP_129S1SvImJ_T0068555.1 MGP_129S1SvImJ_G0028937.1 mouse_genomes_project 4 137313238 137316967 + Rsrp1 protein_coding processed_transcript MGP_129S1SvImJ_T0068556.1 MGP_129S1SvImJ_G0028937.1 mouse_genomes_project 4 137314053 137316967 + Rsrp1 protein_coding processed_transcript MGP_129S1SvImJ_T0068557.1 MGP_129S1SvImJ_G0028937.1 mouse_genomes_project 4 137314303 137314949 + Rsrp1 protein_coding processed_transcript MGP_129S1SvImJ_T0068558.1 MGP_129S1SvImJ_G0028937.1 mouse_genomes_project 4 137315039 137316548 + Rsrp1 protein_coding processed_transcript MGP_129S1SvImJ_T0101171.1 MGP_129S1SvImJ_G0039238.1 mouse_genomes_project 4 146399176 146399308 + Gm22039 snoRNA snoRNA MGP_129S1SvImJ_T0008038.1 MGP_129S1SvImJ_G0006564.1 mouse_genomes_project 4 154846738 154860572 + Gm13049 lincRNA lincRNA MGP_129S1SvImJ_T0069907.1 MGP_129S1SvImJ_G0029243.1 mouse_genomes_project 4 160383618 160386400 + MGP_129S1SvImJ_P0069907 Tnfrsf4 protein_coding protein_coding MGP_129S1SvImJ_T0069908.1 MGP_129S1SvImJ_G0029243.1 mouse_genomes_project 4 160383631 160386387 + Tnfrsf4 protein_coding processed_transcript MGP_129S1SvImJ_T0069909.1 MGP_129S1SvImJ_G0029243.1 mouse_genomes_project 4 160384024 160385034 + Tnfrsf4 protein_coding processed_transcript MGP_129S1SvImJ_T0068914.1 MGP_129S1SvImJ_G0029019.1 mouse_genomes_project 4 142416390 142466826 + MGP_129S1SvImJ_P0068914 Iffo2 protein_coding protein_coding MGP_129S1SvImJ_T0067147.1 MGP_129S1SvImJ_G0028622.1 mouse_genomes_project 4 117028793 117029712 + MGP_129S1SvImJ_P0067147 1700042G07Rik protein_coding protein_coding MGP_129S1SvImJ_T0065879.1 MGP_129S1SvImJ_G0028332.1 mouse_genomes_project 4 57907423 57914080 + MGP_129S1SvImJ_P0065879 Gng10 protein_coding protein_coding MGP_129S1SvImJ_T0065880.1 MGP_129S1SvImJ_G0028332.1 mouse_genomes_project 4 57908107 57914080 + Gng10 protein_coding processed_transcript MGP_129S1SvImJ_T0067364.1 MGP_129S1SvImJ_G0028662.1 mouse_genomes_project 4 118937658 119161726 - MGP_129S1SvImJ_P0067364 St3gal3 protein_coding protein_coding MGP_129S1SvImJ_T0067365.1 MGP_129S1SvImJ_G0028662.1 mouse_genomes_project 4 118937662 119161750 - MGP_129S1SvImJ_P0067365 St3gal3 protein_coding protein_coding MGP_129S1SvImJ_T0067366.1 MGP_129S1SvImJ_G0028662.1 mouse_genomes_project 4 118937664 119161718 - MGP_129S1SvImJ_P0067366 St3gal3 protein_coding protein_coding MGP_129S1SvImJ_T0067367.1 MGP_129S1SvImJ_G0028662.1 mouse_genomes_project 4 118948667 119053707 - MGP_129S1SvImJ_P0067367 St3gal3 protein_coding protein_coding MGP_129S1SvImJ_T0067368.1 MGP_129S1SvImJ_G0028662.1 mouse_genomes_project 4 118948759 118985292 - MGP_129S1SvImJ_P0067368 St3gal3 protein_coding protein_coding MGP_129S1SvImJ_T0000370.1 MGP_129S1SvImJ_G0000312.1 mouse_genomes_project 4 79520852 79520915 + mt-Tt Mt_tRNA Mt_tRNA MGP_129S1SvImJ_T0004563.1 MGP_129S1SvImJ_G0003966.1 mouse_genomes_project 4 132872503 132874423 - Gm26716 antisense antisense MGP_129S1SvImJ_T0067057.1 MGP_129S1SvImJ_G0028604.1 mouse_genomes_project 4 116329775 116389984 + protein_coding processed_transcript MGP_129S1SvImJ_T0007851.1 MGP_129S1SvImJ_G0006422.1 mouse_genomes_project 4 47336072 47405473 + lincRNA lincRNA MGP_129S1SvImJ_T0067859.1 MGP_129S1SvImJ_G0028791.1 mouse_genomes_project 4 128774491 128789256 - MGP_129S1SvImJ_P0067859 Zmym1 protein_coding protein_coding MGP_129S1SvImJ_T0067860.1 MGP_129S1SvImJ_G0028791.1 mouse_genomes_project 4 128774990 128787094 - MGP_129S1SvImJ_P0067860 Zmym1 protein_coding protein_coding MGP_129S1SvImJ_T0067861.1 MGP_129S1SvImJ_G0028791.1 mouse_genomes_project 4 128775039 128789164 - Zmym1 protein_coding processed_transcript MGP_129S1SvImJ_T0067862.1 MGP_129S1SvImJ_G0028791.1 mouse_genomes_project 4 128775039 128789228 - MGP_129S1SvImJ_P0067862 Zmym1 protein_coding protein_coding MGP_129S1SvImJ_T0067863.1 MGP_129S1SvImJ_G0028791.1 mouse_genomes_project 4 128775039 128789203 - MGP_129S1SvImJ_P0067863 Zmym1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0067864.1 MGP_129S1SvImJ_G0028791.1 mouse_genomes_project 4 128776062 128786989 - Zmym1 protein_coding processed_transcript MGP_129S1SvImJ_T0067865.1 MGP_129S1SvImJ_G0028791.1 mouse_genomes_project 4 128782607 128785856 - Zmym1 protein_coding processed_transcript MGP_129S1SvImJ_T0067866.1 MGP_129S1SvImJ_G0028791.1 mouse_genomes_project 4 128782646 128789190 - MGP_129S1SvImJ_P0067866 Zmym1 protein_coding protein_coding MGP_129S1SvImJ_T0014827.1 MGP_129S1SvImJ_G0012916.1 mouse_genomes_project 4 142177784 142178665 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014406.1 MGP_129S1SvImJ_G0012495.1 mouse_genomes_project 4 2769991 2770866 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014838.1 MGP_129S1SvImJ_G0012927.1 mouse_genomes_project 4 147644232 147645677 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004471.1 MGP_129S1SvImJ_G0003898.1 mouse_genomes_project 4 44591387 44640006 - Gm12446 antisense antisense MGP_129S1SvImJ_T0004472.1 MGP_129S1SvImJ_G0003898.1 mouse_genomes_project 4 44623375 44643870 - Gm12446 antisense antisense MGP_129S1SvImJ_T0064782.1 MGP_129S1SvImJ_G0028073.1 mouse_genomes_project 4 12811566 12839751 - MGP_129S1SvImJ_P0064782 Decr1 protein_coding protein_coding MGP_129S1SvImJ_T0064783.1 MGP_129S1SvImJ_G0028073.1 mouse_genomes_project 4 12827225 12839519 - Decr1 protein_coding processed_transcript MGP_129S1SvImJ_T0064784.1 MGP_129S1SvImJ_G0028073.1 mouse_genomes_project 4 12837934 12838733 - Decr1 protein_coding processed_transcript MGP_129S1SvImJ_T0069731.1 MGP_129S1SvImJ_G0029209.1 mouse_genomes_project 4 159456594 159493599 - Ski protein_coding processed_transcript MGP_129S1SvImJ_T0069732.1 MGP_129S1SvImJ_G0029209.1 mouse_genomes_project 4 159456594 159528219 - MGP_129S1SvImJ_P0069732 Ski protein_coding protein_coding MGP_129S1SvImJ_T0069733.1 MGP_129S1SvImJ_G0029209.1 mouse_genomes_project 4 159456594 159528125 - MGP_129S1SvImJ_P0069733 Ski protein_coding protein_coding MGP_129S1SvImJ_T0067763.1 MGP_129S1SvImJ_G0028772.1 mouse_genomes_project 4 127803003 127805134 + MGP_129S1SvImJ_P0067763 Eva1b protein_coding protein_coding MGP_129S1SvImJ_T0067764.1 MGP_129S1SvImJ_G0028772.1 mouse_genomes_project 4 127803262 127805135 + MGP_129S1SvImJ_P0067764 Eva1b protein_coding protein_coding MGP_129S1SvImJ_T0067765.1 MGP_129S1SvImJ_G0028772.1 mouse_genomes_project 4 127803791 127805125 + MGP_129S1SvImJ_P0067765 Eva1b protein_coding protein_coding MGP_129S1SvImJ_T0014789.1 MGP_129S1SvImJ_G0012878.1 mouse_genomes_project 4 128277429 128277730 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007982.1 MGP_129S1SvImJ_G0006520.1 mouse_genomes_project 4 132813678 132818165 - Gm26516 lincRNA lincRNA MGP_129S1SvImJ_T0099855.1 MGP_129S1SvImJ_G0037922.1 mouse_genomes_project 4 109239359 109239462 + Gm23138 snRNA snRNA MGP_129S1SvImJ_T0066386.1 MGP_129S1SvImJ_G0028460.1 mouse_genomes_project 4 96199877 96242842 - MGP_129S1SvImJ_P0066386 Cyp2j12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066387.1 MGP_129S1SvImJ_G0028460.1 mouse_genomes_project 4 96200132 96242828 - MGP_129S1SvImJ_P0066387 Cyp2j12 protein_coding protein_coding MGP_129S1SvImJ_T0065977.1 MGP_129S1SvImJ_G0028360.1 mouse_genomes_project 4 61969366 62135162 + MGP_129S1SvImJ_P0065977 Zfp618 protein_coding protein_coding MGP_129S1SvImJ_T0065978.1 MGP_129S1SvImJ_G0028360.1 mouse_genomes_project 4 61969366 62116907 + MGP_129S1SvImJ_P0065978 Zfp618 protein_coding protein_coding MGP_129S1SvImJ_T0065979.1 MGP_129S1SvImJ_G0028360.1 mouse_genomes_project 4 61969366 62140839 + MGP_129S1SvImJ_P0065979 Zfp618 protein_coding protein_coding MGP_129S1SvImJ_T0065980.1 MGP_129S1SvImJ_G0028360.1 mouse_genomes_project 4 61969461 62134976 + MGP_129S1SvImJ_P0065980 Zfp618 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0065981.1 MGP_129S1SvImJ_G0028360.1 mouse_genomes_project 4 62121558 62122587 + Zfp618 protein_coding processed_transcript MGP_129S1SvImJ_T0065601.1 MGP_129S1SvImJ_G0028256.1 mouse_genomes_project 4 44680815 44695235 - MGP_129S1SvImJ_P0065601 Trmo protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065602.1 MGP_129S1SvImJ_G0028256.1 mouse_genomes_project 4 44681289 44695240 - MGP_129S1SvImJ_P0065602 Trmo protein_coding protein_coding MGP_129S1SvImJ_T0065603.1 MGP_129S1SvImJ_G0028256.1 mouse_genomes_project 4 44684212 44695254 - MGP_129S1SvImJ_P0065603 Trmo protein_coding protein_coding MGP_129S1SvImJ_T0066414.1 MGP_129S1SvImJ_G0028471.1 mouse_genomes_project 4 98514794 98537805 - MGP_129S1SvImJ_P0066414 Tm2d1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066415.1 MGP_129S1SvImJ_G0028471.1 mouse_genomes_project 4 98514794 98545831 - MGP_129S1SvImJ_P0066415 Tm2d1 protein_coding protein_coding MGP_129S1SvImJ_T0066416.1 MGP_129S1SvImJ_G0028471.1 mouse_genomes_project 4 98514794 98546017 - MGP_129S1SvImJ_P0066416 Tm2d1 protein_coding protein_coding MGP_129S1SvImJ_T0066417.1 MGP_129S1SvImJ_G0028471.1 mouse_genomes_project 4 98514794 98546077 - MGP_129S1SvImJ_P0066417 Tm2d1 protein_coding protein_coding MGP_129S1SvImJ_T0066418.1 MGP_129S1SvImJ_G0028471.1 mouse_genomes_project 4 98515029 98546003 - MGP_129S1SvImJ_P0066418 Tm2d1 protein_coding protein_coding MGP_129S1SvImJ_T0008033.1 MGP_129S1SvImJ_G0006559.1 mouse_genomes_project 4 153682964 153691773 + Gm16188 lincRNA lincRNA MGP_129S1SvImJ_T0005643.1 MGP_129S1SvImJ_G0004756.1 mouse_genomes_project 4 108490924 108501658 - Lrp8os3 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0069497.1 MGP_129S1SvImJ_G0029169.1 mouse_genomes_project 4 156126313 156136370 - MGP_129S1SvImJ_P0069497 Tas1r1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0069498.1 MGP_129S1SvImJ_G0029169.1 mouse_genomes_project 4 156126322 156137524 - MGP_129S1SvImJ_P0069498 Tas1r1 protein_coding protein_coding MGP_129S1SvImJ_T0001447.1 MGP_129S1SvImJ_G0001369.1 mouse_genomes_project 4 144268618 144269893 - TEC TEC MGP_129S1SvImJ_T0001448.1 MGP_129S1SvImJ_G0001369.1 mouse_genomes_project 4 144268624 144269893 - TEC TEC MGP_129S1SvImJ_T0069818.1 MGP_129S1SvImJ_G0029224.1 mouse_genomes_project 4 160089815 160095184 + MGP_129S1SvImJ_P0069818 Tmem240 protein_coding protein_coding MGP_129S1SvImJ_T0069819.1 MGP_129S1SvImJ_G0029224.1 mouse_genomes_project 4 160089819 160095606 + Tmem240 protein_coding retained_intron MGP_129S1SvImJ_T0069820.1 MGP_129S1SvImJ_G0029224.1 mouse_genomes_project 4 160089889 160095606 + MGP_129S1SvImJ_P0069820 Tmem240 protein_coding protein_coding MGP_129S1SvImJ_T0065132.1 MGP_129S1SvImJ_G0028163.1 mouse_genomes_project 4 39453394 39456150 - 1110017D15Rik protein_coding processed_transcript MGP_129S1SvImJ_T0065133.1 MGP_129S1SvImJ_G0028163.1 mouse_genomes_project 4 39453394 39456140 - 1110017D15Rik protein_coding processed_transcript MGP_129S1SvImJ_T0065134.1 MGP_129S1SvImJ_G0028163.1 mouse_genomes_project 4 39453394 39456145 - 1110017D15Rik protein_coding processed_transcript MGP_129S1SvImJ_T0065135.1 MGP_129S1SvImJ_G0028163.1 mouse_genomes_project 4 39453394 39459851 - MGP_129S1SvImJ_P0065135 1110017D15Rik protein_coding protein_coding MGP_129S1SvImJ_T0065136.1 MGP_129S1SvImJ_G0028163.1 mouse_genomes_project 4 39453394 39465678 - MGP_129S1SvImJ_P0065136 1110017D15Rik protein_coding protein_coding MGP_129S1SvImJ_T0065137.1 MGP_129S1SvImJ_G0028163.1 mouse_genomes_project 4 39453394 39465678 - MGP_129S1SvImJ_P0065137 1110017D15Rik protein_coding protein_coding MGP_129S1SvImJ_T0065138.1 MGP_129S1SvImJ_G0028163.1 mouse_genomes_project 4 39455510 39465673 - 1110017D15Rik protein_coding processed_transcript MGP_129S1SvImJ_T0065139.1 MGP_129S1SvImJ_G0028163.1 mouse_genomes_project 4 39456917 39457348 - 1110017D15Rik protein_coding processed_transcript MGP_129S1SvImJ_T0068835.1 MGP_129S1SvImJ_G0029000.1 mouse_genomes_project 4 141488863 141510133 - MGP_129S1SvImJ_P0068835 Ubxn10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068836.1 MGP_129S1SvImJ_G0029000.1 mouse_genomes_project 4 141503449 141510177 - MGP_129S1SvImJ_P0068836 Ubxn10 protein_coding protein_coding MGP_129S1SvImJ_T0068837.1 MGP_129S1SvImJ_G0029000.1 mouse_genomes_project 4 141503449 141522071 - MGP_129S1SvImJ_P0068837 Ubxn10 protein_coding protein_coding MGP_129S1SvImJ_T0068838.1 MGP_129S1SvImJ_G0029000.1 mouse_genomes_project 4 141503749 141509768 - MGP_129S1SvImJ_P0068838 Ubxn10 protein_coding protein_coding MGP_129S1SvImJ_T0068842.1 MGP_129S1SvImJ_G0029000.1 mouse_genomes_project 4 141516788 141522040 - Ubxn10 protein_coding processed_transcript MGP_129S1SvImJ_T0007946.1 MGP_129S1SvImJ_G0006498.1 mouse_genomes_project 4 120229209 120244472 - Gm12866 lincRNA lincRNA MGP_129S1SvImJ_T0067256.1 MGP_129S1SvImJ_G0028643.1 mouse_genomes_project 4 118078197 118081309 - Btbd19 protein_coding processed_transcript MGP_129S1SvImJ_T0067257.1 MGP_129S1SvImJ_G0028643.1 mouse_genomes_project 4 118078855 118081364 - Btbd19 protein_coding processed_transcript MGP_129S1SvImJ_T0067258.1 MGP_129S1SvImJ_G0028643.1 mouse_genomes_project 4 118079153 118084692 - MGP_129S1SvImJ_P0067258 Btbd19 protein_coding protein_coding MGP_129S1SvImJ_T0067259.1 MGP_129S1SvImJ_G0028643.1 mouse_genomes_project 4 118079629 118081338 - Btbd19 protein_coding processed_transcript MGP_129S1SvImJ_T0067260.1 MGP_129S1SvImJ_G0028643.1 mouse_genomes_project 4 118079684 118080244 - Btbd19 protein_coding retained_intron MGP_129S1SvImJ_T0067261.1 MGP_129S1SvImJ_G0028643.1 mouse_genomes_project 4 118079707 118080856 - Btbd19 protein_coding retained_intron MGP_129S1SvImJ_T0067262.1 MGP_129S1SvImJ_G0028643.1 mouse_genomes_project 4 118080291 118084799 - MGP_129S1SvImJ_P0067262 Btbd19 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067263.1 MGP_129S1SvImJ_G0028643.1 mouse_genomes_project 4 118080418 118084732 - MGP_129S1SvImJ_P0067263 Btbd19 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067264.1 MGP_129S1SvImJ_G0028643.1 mouse_genomes_project 4 118082970 118084240 - Btbd19 protein_coding processed_transcript MGP_129S1SvImJ_T0014529.1 MGP_129S1SvImJ_G0012618.1 mouse_genomes_project 4 37682652 37683340 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065260.1 MGP_129S1SvImJ_G0028198.1 mouse_genomes_project 4 41098524 41107309 - MGP_129S1SvImJ_P0065260 Pigo protein_coding protein_coding MGP_129S1SvImJ_T0065261.1 MGP_129S1SvImJ_G0028198.1 mouse_genomes_project 4 41098524 41108048 - MGP_129S1SvImJ_P0065261 Pigo protein_coding protein_coding MGP_129S1SvImJ_T0065262.1 MGP_129S1SvImJ_G0028198.1 mouse_genomes_project 4 41098524 41107985 - MGP_129S1SvImJ_P0065262 Pigo protein_coding protein_coding MGP_129S1SvImJ_T0065263.1 MGP_129S1SvImJ_G0028198.1 mouse_genomes_project 4 41098796 41100596 - Pigo protein_coding processed_transcript MGP_129S1SvImJ_T0065264.1 MGP_129S1SvImJ_G0028198.1 mouse_genomes_project 4 41098798 41108013 - MGP_129S1SvImJ_P0065264 Pigo protein_coding unknown_likely_coding MGP_129S1SvImJ_T0065265.1 MGP_129S1SvImJ_G0028198.1 mouse_genomes_project 4 41106931 41107696 - Pigo protein_coding processed_transcript MGP_129S1SvImJ_T0014469.1 MGP_129S1SvImJ_G0012558.1 mouse_genomes_project 4 20766920 20767337 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101091.1 MGP_129S1SvImJ_G0039158.1 mouse_genomes_project 4 10852090 10854062 - Gm24068 snoRNA snoRNA MGP_129S1SvImJ_T0014618.1 MGP_129S1SvImJ_G0012707.1 mouse_genomes_project 4 72637107 72638282 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064689.1 MGP_129S1SvImJ_G0028049.1 mouse_genomes_project 4 7838933 7841544 + Ccne2 protein_coding processed_transcript MGP_129S1SvImJ_T0064690.1 MGP_129S1SvImJ_G0028049.1 mouse_genomes_project 4 7838936 7852286 + MGP_129S1SvImJ_P0064690 Ccne2 protein_coding protein_coding MGP_129S1SvImJ_T0064691.1 MGP_129S1SvImJ_G0028049.1 mouse_genomes_project 4 7839291 7842738 + Ccne2 protein_coding processed_transcript MGP_129S1SvImJ_T0064692.1 MGP_129S1SvImJ_G0028049.1 mouse_genomes_project 4 7839308 7852390 + MGP_129S1SvImJ_P0064692 Ccne2 protein_coding protein_coding MGP_129S1SvImJ_T0064693.1 MGP_129S1SvImJ_G0028049.1 mouse_genomes_project 4 7839312 7852293 + MGP_129S1SvImJ_P0064693 Ccne2 protein_coding protein_coding MGP_129S1SvImJ_T0064694.1 MGP_129S1SvImJ_G0028049.1 mouse_genomes_project 4 7839318 7842620 + Ccne2 protein_coding processed_transcript MGP_129S1SvImJ_T0064695.1 MGP_129S1SvImJ_G0028049.1 mouse_genomes_project 4 7840179 7840818 + Ccne2 protein_coding processed_transcript MGP_129S1SvImJ_T0014605.1 MGP_129S1SvImJ_G0012694.1 mouse_genomes_project 4 66647120 66647760 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014480.1 MGP_129S1SvImJ_G0012569.1 mouse_genomes_project 4 23656919 23657136 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069182.1 MGP_129S1SvImJ_G0029109.1 mouse_genomes_project 4 151551434 151587846 - MGP_129S1SvImJ_P0069182 Mfn2 protein_coding protein_coding MGP_129S1SvImJ_T0069183.1 MGP_129S1SvImJ_G0029109.1 mouse_genomes_project 4 151551434 151587863 - MGP_129S1SvImJ_P0069183 Mfn2 protein_coding protein_coding MGP_129S1SvImJ_T0069184.1 MGP_129S1SvImJ_G0029109.1 mouse_genomes_project 4 151551851 151587857 - MGP_129S1SvImJ_P0069184 Mfn2 protein_coding protein_coding MGP_129S1SvImJ_T0069185.1 MGP_129S1SvImJ_G0029109.1 mouse_genomes_project 4 151559106 151587857 - MGP_129S1SvImJ_P0069185 Mfn2 protein_coding protein_coding MGP_129S1SvImJ_T0069186.1 MGP_129S1SvImJ_G0029109.1 mouse_genomes_project 4 151563319 151565185 - Mfn2 protein_coding processed_transcript MGP_129S1SvImJ_T0069187.1 MGP_129S1SvImJ_G0029109.1 mouse_genomes_project 4 151564995 151586556 - MGP_129S1SvImJ_P0069187 Mfn2 protein_coding protein_coding MGP_129S1SvImJ_T0069188.1 MGP_129S1SvImJ_G0029109.1 mouse_genomes_project 4 151576534 151587817 - MGP_129S1SvImJ_P0069188 Mfn2 protein_coding protein_coding MGP_129S1SvImJ_T0101088.1 MGP_129S1SvImJ_G0039155.1 mouse_genomes_project 4 2212924 2213050 - Gm24337 snoRNA snoRNA MGP_129S1SvImJ_T0004633.1 MGP_129S1SvImJ_G0004021.1 mouse_genomes_project 4 160087566 160089743 - 1500002C15Rik antisense antisense MGP_129S1SvImJ_T0004634.1 MGP_129S1SvImJ_G0004021.1 mouse_genomes_project 4 160087569 160089643 - 1500002C15Rik antisense antisense MGP_129S1SvImJ_T0102529.1 MGP_129S1SvImJ_G0040362.1 mouse_genomes_project 4 96345760 96368110 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0066685.1 MGP_129S1SvImJ_G0028529.1 mouse_genomes_project 4 107725544 107736560 - MGP_129S1SvImJ_P0066685 Mrpl37 protein_coding protein_coding MGP_129S1SvImJ_T0066686.1 MGP_129S1SvImJ_G0028529.1 mouse_genomes_project 4 107725555 107729621 - Mrpl37 protein_coding retained_intron MGP_129S1SvImJ_T0066687.1 MGP_129S1SvImJ_G0028529.1 mouse_genomes_project 4 107725638 107734462 - Mrpl37 protein_coding processed_transcript MGP_129S1SvImJ_T0066688.1 MGP_129S1SvImJ_G0028529.1 mouse_genomes_project 4 107725645 107736512 - Mrpl37 protein_coding processed_transcript MGP_129S1SvImJ_T0066689.1 MGP_129S1SvImJ_G0028529.1 mouse_genomes_project 4 107734087 107735049 - Mrpl37 protein_coding retained_intron MGP_129S1SvImJ_T0007910.1 MGP_129S1SvImJ_G0006470.1 mouse_genomes_project 4 99371165 99385831 - Gm12681 lincRNA lincRNA MGP_129S1SvImJ_T0014597.1 MGP_129S1SvImJ_G0012686.1 mouse_genomes_project 4 61943194 61943858 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068310.1 MGP_129S1SvImJ_G0028880.1 mouse_genomes_project 4 134970137 134986968 - MGP_129S1SvImJ_P0068310 Themis2 protein_coding protein_coding MGP_129S1SvImJ_T0066462.1 MGP_129S1SvImJ_G0028478.1 mouse_genomes_project 4 99239762 99246793 + MGP_129S1SvImJ_P0066462 Angptl3 protein_coding protein_coding MGP_129S1SvImJ_T0066463.1 MGP_129S1SvImJ_G0028478.1 mouse_genomes_project 4 99241987 99246687 + Angptl3 protein_coding processed_transcript MGP_129S1SvImJ_T0066464.1 MGP_129S1SvImJ_G0028478.1 mouse_genomes_project 4 99242011 99254863 + Angptl3 protein_coding processed_transcript MGP_129S1SvImJ_T0066227.1 MGP_129S1SvImJ_G0028413.1 mouse_genomes_project 4 86412958 86426212 - Plin2 protein_coding processed_transcript MGP_129S1SvImJ_T0066228.1 MGP_129S1SvImJ_G0028413.1 mouse_genomes_project 4 86424093 86442505 - MGP_129S1SvImJ_P0066228 Plin2 protein_coding protein_coding MGP_129S1SvImJ_T0066229.1 MGP_129S1SvImJ_G0028413.1 mouse_genomes_project 4 86424435 86426173 - Plin2 protein_coding processed_transcript MGP_129S1SvImJ_T0066230.1 MGP_129S1SvImJ_G0028413.1 mouse_genomes_project 4 86424684 86426677 - Plin2 protein_coding processed_transcript MGP_129S1SvImJ_T0066231.1 MGP_129S1SvImJ_G0028413.1 mouse_genomes_project 4 86427649 86437872 - MGP_129S1SvImJ_P0066231 Plin2 protein_coding protein_coding MGP_129S1SvImJ_T0066232.1 MGP_129S1SvImJ_G0028413.1 mouse_genomes_project 4 86431469 86442005 - MGP_129S1SvImJ_P0066232 Plin2 protein_coding protein_coding MGP_129S1SvImJ_T0066233.1 MGP_129S1SvImJ_G0028413.1 mouse_genomes_project 4 86431469 86442213 - MGP_129S1SvImJ_P0066233 Plin2 protein_coding protein_coding MGP_129S1SvImJ_T0066234.1 MGP_129S1SvImJ_G0028413.1 mouse_genomes_project 4 86440109 86442431 - Plin2 protein_coding processed_transcript MGP_129S1SvImJ_T0008041.1 MGP_129S1SvImJ_G0006567.1 mouse_genomes_project 4 157406351 157406771 + Gm13174 lincRNA lincRNA MGP_129S1SvImJ_T0067151.1 MGP_129S1SvImJ_G0028624.1 mouse_genomes_project 4 117179649 117346817 - MGP_129S1SvImJ_P0067151 Mast2 protein_coding protein_coding MGP_129S1SvImJ_T0067152.1 MGP_129S1SvImJ_G0028624.1 mouse_genomes_project 4 117179650 117347244 - MGP_129S1SvImJ_P0067152 Mast2 protein_coding protein_coding MGP_129S1SvImJ_T0067153.1 MGP_129S1SvImJ_G0028624.1 mouse_genomes_project 4 117179650 117347244 - MGP_129S1SvImJ_P0067153 Mast2 protein_coding protein_coding MGP_129S1SvImJ_T0067154.1 MGP_129S1SvImJ_G0028624.1 mouse_genomes_project 4 117179702 117346981 - MGP_129S1SvImJ_P0067154 Mast2 protein_coding protein_coding MGP_129S1SvImJ_T0067155.1 MGP_129S1SvImJ_G0028624.1 mouse_genomes_project 4 117180895 117182093 - Mast2 protein_coding processed_transcript MGP_129S1SvImJ_T0067156.1 MGP_129S1SvImJ_G0028624.1 mouse_genomes_project 4 117182467 117183689 - Mast2 protein_coding processed_transcript MGP_129S1SvImJ_T0067157.1 MGP_129S1SvImJ_G0028624.1 mouse_genomes_project 4 117182499 117183536 - Mast2 protein_coding processed_transcript MGP_129S1SvImJ_T0067158.1 MGP_129S1SvImJ_G0028624.1 mouse_genomes_project 4 117185178 117188964 - Mast2 protein_coding processed_transcript MGP_129S1SvImJ_T0067159.1 MGP_129S1SvImJ_G0028624.1 mouse_genomes_project 4 117185740 117190648 - Mast2 protein_coding processed_transcript MGP_129S1SvImJ_T0067160.1 MGP_129S1SvImJ_G0028624.1 mouse_genomes_project 4 117190607 117200689 - Mast2 protein_coding processed_transcript MGP_129S1SvImJ_T0067161.1 MGP_129S1SvImJ_G0028624.1 mouse_genomes_project 4 117192736 117203556 - Mast2 protein_coding processed_transcript MGP_129S1SvImJ_T0067162.1 MGP_129S1SvImJ_G0028624.1 mouse_genomes_project 4 117195321 117282217 - MGP_129S1SvImJ_P0067162 Mast2 protein_coding protein_coding MGP_129S1SvImJ_T0067163.1 MGP_129S1SvImJ_G0028624.1 mouse_genomes_project 4 117200509 117282233 - MGP_129S1SvImJ_P0067163 Mast2 protein_coding protein_coding MGP_129S1SvImJ_T0067164.1 MGP_129S1SvImJ_G0028624.1 mouse_genomes_project 4 117205803 117283038 - Mast2 protein_coding processed_transcript MGP_129S1SvImJ_T0067165.1 MGP_129S1SvImJ_G0028624.1 mouse_genomes_project 4 117206092 117316560 - Mast2 protein_coding processed_transcript MGP_129S1SvImJ_T0065538.1 MGP_129S1SvImJ_G0028242.1 mouse_genomes_project 4 43525297 43545506 + MGP_129S1SvImJ_P0065538 Trmt10b protein_coding protein_coding MGP_129S1SvImJ_T0065539.1 MGP_129S1SvImJ_G0028242.1 mouse_genomes_project 4 43525325 43532559 + MGP_129S1SvImJ_P0065539 Trmt10b protein_coding protein_coding MGP_129S1SvImJ_T0065540.1 MGP_129S1SvImJ_G0028242.1 mouse_genomes_project 4 43528584 43539164 + Trmt10b protein_coding processed_transcript MGP_129S1SvImJ_T0065541.1 MGP_129S1SvImJ_G0028242.1 mouse_genomes_project 4 43528604 43544517 + Trmt10b protein_coding processed_transcript MGP_129S1SvImJ_T0065542.1 MGP_129S1SvImJ_G0028242.1 mouse_genomes_project 4 43528604 43532556 + Trmt10b protein_coding processed_transcript MGP_129S1SvImJ_T0065543.1 MGP_129S1SvImJ_G0028242.1 mouse_genomes_project 4 43528604 43544517 + MGP_129S1SvImJ_P0065543 Trmt10b protein_coding protein_coding MGP_129S1SvImJ_T0065544.1 MGP_129S1SvImJ_G0028242.1 mouse_genomes_project 4 43543472 43544423 + Trmt10b protein_coding processed_transcript MGP_129S1SvImJ_T0099819.1 MGP_129S1SvImJ_G0037886.1 mouse_genomes_project 4 34446859 34446966 + Gm23314 snRNA snRNA MGP_129S1SvImJ_T0010663.1 MGP_129S1SvImJ_G0008779.1 mouse_genomes_project 4 142492158 142492228 + Mir7020 miRNA miRNA MGP_129S1SvImJ_T0014527.1 MGP_129S1SvImJ_G0012616.1 mouse_genomes_project 4 37607259 37608054 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007904.1 MGP_129S1SvImJ_G0006465.1 mouse_genomes_project 4 93465723 93696122 - Gm12649 lincRNA lincRNA MGP_129S1SvImJ_T0066025.1 MGP_129S1SvImJ_G0028372.1 mouse_genomes_project 4 62677294 62678315 - Gm11214 protein_coding translated_processed_pseudogene MGP_129S1SvImJ_T0066026.1 MGP_129S1SvImJ_G0028372.1 mouse_genomes_project 4 62677294 62677846 - MGP_129S1SvImJ_P0066026 Gm11214 protein_coding protein_coding MGP_129S1SvImJ_T0065778.1 MGP_129S1SvImJ_G0028306.1 mouse_genomes_project 4 54241405 54248871 - MGP_129S1SvImJ_P0065778 Klf4 protein_coding protein_coding MGP_129S1SvImJ_T0065779.1 MGP_129S1SvImJ_G0028306.1 mouse_genomes_project 4 54241598 54246216 - MGP_129S1SvImJ_P0065779 Klf4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0065780.1 MGP_129S1SvImJ_G0028306.1 mouse_genomes_project 4 54244947 54246115 - MGP_129S1SvImJ_P0065780 Klf4 protein_coding protein_coding MGP_129S1SvImJ_T0065781.1 MGP_129S1SvImJ_G0028306.1 mouse_genomes_project 4 54245056 54248858 - MGP_129S1SvImJ_P0065781 Klf4 protein_coding protein_coding MGP_129S1SvImJ_T0011594.1 MGP_129S1SvImJ_G0009710.1 mouse_genomes_project 4 94484808 94485069 - Gm26410 misc_RNA misc_RNA MGP_129S1SvImJ_T0065725.1 MGP_129S1SvImJ_G0028290.1 mouse_genomes_project 4 51018844 51077623 + MGP_129S1SvImJ_P0065725 Smc2 protein_coding protein_coding MGP_129S1SvImJ_T0065726.1 MGP_129S1SvImJ_G0028290.1 mouse_genomes_project 4 51018844 51077623 + MGP_129S1SvImJ_P0065726 Smc2 protein_coding protein_coding MGP_129S1SvImJ_T0065727.1 MGP_129S1SvImJ_G0028290.1 mouse_genomes_project 4 51018853 51030077 + Smc2 protein_coding processed_transcript MGP_129S1SvImJ_T0065728.1 MGP_129S1SvImJ_G0028290.1 mouse_genomes_project 4 51018867 51036023 + Smc2 protein_coding processed_transcript MGP_129S1SvImJ_T0065729.1 MGP_129S1SvImJ_G0028290.1 mouse_genomes_project 4 51018870 51043269 + MGP_129S1SvImJ_P0065729 Smc2 protein_coding protein_coding MGP_129S1SvImJ_T0065730.1 MGP_129S1SvImJ_G0028290.1 mouse_genomes_project 4 51041956 51077472 + MGP_129S1SvImJ_P0065730 Smc2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0067766.1 MGP_129S1SvImJ_G0028773.1 mouse_genomes_project 4 127805861 127817930 - Sh3d21 protein_coding processed_transcript MGP_129S1SvImJ_T0067767.1 MGP_129S1SvImJ_G0028773.1 mouse_genomes_project 4 127805861 127817891 - MGP_129S1SvImJ_P0067767 Sh3d21 protein_coding protein_coding MGP_129S1SvImJ_T0067768.1 MGP_129S1SvImJ_G0028773.1 mouse_genomes_project 4 127805861 127818756 - MGP_129S1SvImJ_P0067768 Sh3d21 protein_coding protein_coding MGP_129S1SvImJ_T0067769.1 MGP_129S1SvImJ_G0028773.1 mouse_genomes_project 4 127805867 127817866 - Sh3d21 protein_coding processed_transcript MGP_129S1SvImJ_T0067770.1 MGP_129S1SvImJ_G0028773.1 mouse_genomes_project 4 127806816 127817921 - Sh3d21 protein_coding processed_transcript MGP_129S1SvImJ_T0101143.1 MGP_129S1SvImJ_G0039210.1 mouse_genomes_project 4 106717810 106717925 - Gm26047 snoRNA snoRNA MGP_129S1SvImJ_T0066565.1 MGP_129S1SvImJ_G0028502.1 mouse_genomes_project 4 103378832 103403696 + MGP_129S1SvImJ_P0066565 Tctex1d1 protein_coding protein_coding MGP_129S1SvImJ_T0066566.1 MGP_129S1SvImJ_G0028502.1 mouse_genomes_project 4 103384929 103403926 + MGP_129S1SvImJ_P0066566 Tctex1d1 protein_coding protein_coding MGP_129S1SvImJ_T0066567.1 MGP_129S1SvImJ_G0028502.1 mouse_genomes_project 4 103387123 103404946 + MGP_129S1SvImJ_P0066567 Tctex1d1 protein_coding protein_coding MGP_129S1SvImJ_T0066568.1 MGP_129S1SvImJ_G0028502.1 mouse_genomes_project 4 103390376 103391442 + Tctex1d1 protein_coding processed_transcript MGP_129S1SvImJ_T0014478.1 MGP_129S1SvImJ_G0012567.1 mouse_genomes_project 4 22985749 22986216 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068003.1 MGP_129S1SvImJ_G0028824.1 mouse_genomes_project 4 131412362 131414371 - MGP_129S1SvImJ_P0068003 Tssk3 protein_coding protein_coding MGP_129S1SvImJ_T0102515.1 MGP_129S1SvImJ_G0040349.1 mouse_genomes_project 4 41918043 41918991 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0007967.1 MGP_129S1SvImJ_G0006510.1 mouse_genomes_project 4 129313401 129344466 + A630031M04Rik lincRNA lincRNA MGP_129S1SvImJ_T0067050.1 MGP_129S1SvImJ_G0028599.1 mouse_genomes_project 4 116209116 116239042 + MGP_129S1SvImJ_P0067050 protein_coding protein_coding MGP_129S1SvImJ_T0007909.1 MGP_129S1SvImJ_G0006469.1 mouse_genomes_project 4 95474178 95474991 - Gm29064 lincRNA lincRNA MGP_129S1SvImJ_T0007898.1 MGP_129S1SvImJ_G0006460.1 mouse_genomes_project 4 89184731 89230787 - lincRNA lincRNA MGP_129S1SvImJ_T0007899.1 MGP_129S1SvImJ_G0006460.1 mouse_genomes_project 4 89184749 89231608 - lincRNA lincRNA MGP_129S1SvImJ_T0101131.1 MGP_129S1SvImJ_G0039198.1 mouse_genomes_project 4 74556474 74556604 - Gm22864 snoRNA snoRNA MGP_129S1SvImJ_T0004477.1 MGP_129S1SvImJ_G0003903.1 mouse_genomes_project 4 55953729 55958213 + Gm12530 antisense antisense MGP_129S1SvImJ_T0014732.1 MGP_129S1SvImJ_G0012821.1 mouse_genomes_project 4 111304998 111305266 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066243.1 MGP_129S1SvImJ_G0028416.1 mouse_genomes_project 4 86652900 86697210 + MGP_129S1SvImJ_P0066243 Acer2 protein_coding protein_coding MGP_129S1SvImJ_T0066244.1 MGP_129S1SvImJ_G0028416.1 mouse_genomes_project 4 86652918 86710386 + Acer2 protein_coding processed_transcript MGP_129S1SvImJ_T0066245.1 MGP_129S1SvImJ_G0028416.1 mouse_genomes_project 4 86652918 86697210 + MGP_129S1SvImJ_P0066245 Acer2 protein_coding protein_coding MGP_129S1SvImJ_T0066246.1 MGP_129S1SvImJ_G0028416.1 mouse_genomes_project 4 86707569 86712716 + Acer2 protein_coding processed_transcript MGP_129S1SvImJ_T0004474.1 MGP_129S1SvImJ_G0003900.1 mouse_genomes_project 4 51009882 51018567 - Smc2os antisense antisense MGP_129S1SvImJ_T0007876.1 MGP_129S1SvImJ_G0006441.1 mouse_genomes_project 4 62615291 62625258 - lincRNA lincRNA MGP_129S1SvImJ_T0065707.1 MGP_129S1SvImJ_G0028286.1 mouse_genomes_project 4 48116090 48122773 + MGP_129S1SvImJ_P0065707 Rnf20 protein_coding protein_coding MGP_129S1SvImJ_T0065708.1 MGP_129S1SvImJ_G0028286.1 mouse_genomes_project 4 48116144 48140929 + MGP_129S1SvImJ_P0065708 Rnf20 protein_coding protein_coding MGP_129S1SvImJ_T0065709.1 MGP_129S1SvImJ_G0028286.1 mouse_genomes_project 4 48116144 48134295 + MGP_129S1SvImJ_P0065709 Rnf20 protein_coding protein_coding MGP_129S1SvImJ_T0065710.1 MGP_129S1SvImJ_G0028286.1 mouse_genomes_project 4 48116150 48140930 + MGP_129S1SvImJ_P0065710 Rnf20 protein_coding protein_coding MGP_129S1SvImJ_T0065711.1 MGP_129S1SvImJ_G0028286.1 mouse_genomes_project 4 48116177 48128602 + MGP_129S1SvImJ_P0065711 Rnf20 protein_coding protein_coding MGP_129S1SvImJ_T0065712.1 MGP_129S1SvImJ_G0028286.1 mouse_genomes_project 4 48116221 48124084 + Rnf20 protein_coding processed_transcript MGP_129S1SvImJ_T0065713.1 MGP_129S1SvImJ_G0028286.1 mouse_genomes_project 4 48116243 48127030 + Rnf20 protein_coding processed_transcript MGP_129S1SvImJ_T0065714.1 MGP_129S1SvImJ_G0028286.1 mouse_genomes_project 4 48125788 48132483 + Rnf20 protein_coding processed_transcript MGP_129S1SvImJ_T0065715.1 MGP_129S1SvImJ_G0028286.1 mouse_genomes_project 4 48134306 48136870 + Rnf20 protein_coding processed_transcript MGP_129S1SvImJ_T0065716.1 MGP_129S1SvImJ_G0028286.1 mouse_genomes_project 4 48135011 48136594 + Rnf20 protein_coding processed_transcript MGP_129S1SvImJ_T0014795.1 MGP_129S1SvImJ_G0012884.1 mouse_genomes_project 4 129044711 129045393 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011584.1 MGP_129S1SvImJ_G0009700.1 mouse_genomes_project 4 45989584 45989711 + Gm27601 misc_RNA misc_RNA MGP_129S1SvImJ_T0014662.1 MGP_129S1SvImJ_G0012751.1 mouse_genomes_project 4 89116929 89117422 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064888.1 MGP_129S1SvImJ_G0028102.1 mouse_genomes_project 4 22303695 22345905 - MGP_129S1SvImJ_P0064888 Fhl5 protein_coding protein_coding MGP_129S1SvImJ_T0064889.1 MGP_129S1SvImJ_G0028102.1 mouse_genomes_project 4 22303695 22345905 - MGP_129S1SvImJ_P0064889 Fhl5 protein_coding protein_coding MGP_129S1SvImJ_T0067558.1 MGP_129S1SvImJ_G0028713.1 mouse_genomes_project 4 121974903 122027402 - MGP_129S1SvImJ_P0067558 Kcnq4 protein_coding protein_coding MGP_129S1SvImJ_T0067559.1 MGP_129S1SvImJ_G0028713.1 mouse_genomes_project 4 121994001 122028578 - Kcnq4 protein_coding processed_transcript MGP_129S1SvImJ_T0069107.1 MGP_129S1SvImJ_G0029068.1 mouse_genomes_project 4 146619642 146626858 + MGP_129S1SvImJ_P0069107 Pramel1 protein_coding protein_coding MGP_129S1SvImJ_T0010619.1 MGP_129S1SvImJ_G0008735.1 mouse_genomes_project 4 87966710 87966796 + Mir491 miRNA miRNA MGP_129S1SvImJ_T0066126.1 MGP_129S1SvImJ_G0028398.1 mouse_genomes_project 4 81851915 82068656 - MGP_129S1SvImJ_P0066126 Nfib protein_coding protein_coding MGP_129S1SvImJ_T0066127.1 MGP_129S1SvImJ_G0028398.1 mouse_genomes_project 4 81882885 82069206 - Nfib protein_coding retained_intron MGP_129S1SvImJ_T0066128.1 MGP_129S1SvImJ_G0028398.1 mouse_genomes_project 4 81884670 82069206 - Nfib protein_coding retained_intron MGP_129S1SvImJ_T0066129.1 MGP_129S1SvImJ_G0028398.1 mouse_genomes_project 4 81909657 82070638 - Nfib protein_coding retained_intron MGP_129S1SvImJ_T0066130.1 MGP_129S1SvImJ_G0028398.1 mouse_genomes_project 4 82059877 82070653 - Nfib protein_coding retained_intron MGP_129S1SvImJ_T0066131.1 MGP_129S1SvImJ_G0028398.1 mouse_genomes_project 4 82062214 82275549 - MGP_129S1SvImJ_P0066131 Nfib protein_coding protein_coding MGP_129S1SvImJ_T0066132.1 MGP_129S1SvImJ_G0028398.1 mouse_genomes_project 4 82062437 82063210 - Nfib protein_coding processed_transcript MGP_129S1SvImJ_T0069402.1 MGP_129S1SvImJ_G0029152.1 mouse_genomes_project 4 154122827 154138506 - MGP_129S1SvImJ_P0069402 Car6 protein_coding protein_coding MGP_129S1SvImJ_T0069403.1 MGP_129S1SvImJ_G0029152.1 mouse_genomes_project 4 154122827 154135619 - MGP_129S1SvImJ_P0069403 Car6 protein_coding protein_coding MGP_129S1SvImJ_T0069404.1 MGP_129S1SvImJ_G0029152.1 mouse_genomes_project 4 154123024 154133276 - Car6 protein_coding processed_transcript MGP_129S1SvImJ_T0069405.1 MGP_129S1SvImJ_G0029152.1 mouse_genomes_project 4 154124103 154135352 - Car6 protein_coding processed_transcript MGP_129S1SvImJ_T0014768.1 MGP_129S1SvImJ_G0012857.1 mouse_genomes_project 4 122438679 122439102 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066055.1 MGP_129S1SvImJ_G0028384.1 mouse_genomes_project 4 71326825 71411343 - MGP_129S1SvImJ_P0066055 Tle1 protein_coding protein_coding MGP_129S1SvImJ_T0066056.1 MGP_129S1SvImJ_G0028384.1 mouse_genomes_project 4 71327488 71411281 - MGP_129S1SvImJ_P0066056 Tle1 protein_coding protein_coding MGP_129S1SvImJ_T0066057.1 MGP_129S1SvImJ_G0028384.1 mouse_genomes_project 4 71327490 71411278 - MGP_129S1SvImJ_P0066057 Tle1 protein_coding protein_coding MGP_129S1SvImJ_T0066058.1 MGP_129S1SvImJ_G0028384.1 mouse_genomes_project 4 71327493 71409514 - Tle1 protein_coding retained_intron MGP_129S1SvImJ_T0066059.1 MGP_129S1SvImJ_G0028384.1 mouse_genomes_project 4 71327885 71410574 - MGP_129S1SvImJ_P0066059 Tle1 protein_coding protein_coding MGP_129S1SvImJ_T0066060.1 MGP_129S1SvImJ_G0028384.1 mouse_genomes_project 4 71327900 71330499 - Tle1 protein_coding processed_transcript MGP_129S1SvImJ_T0066061.1 MGP_129S1SvImJ_G0028384.1 mouse_genomes_project 4 71348262 71350993 - MGP_129S1SvImJ_P0066061 Tle1 protein_coding protein_coding MGP_129S1SvImJ_T0066062.1 MGP_129S1SvImJ_G0028384.1 mouse_genomes_project 4 71367863 71411286 - MGP_129S1SvImJ_P0066062 Tle1 protein_coding protein_coding MGP_129S1SvImJ_T0066063.1 MGP_129S1SvImJ_G0028384.1 mouse_genomes_project 4 71368555 71409914 - MGP_129S1SvImJ_P0066063 Tle1 protein_coding protein_coding MGP_129S1SvImJ_T0066064.1 MGP_129S1SvImJ_G0028384.1 mouse_genomes_project 4 71377463 71411317 - Tle1 protein_coding processed_transcript MGP_129S1SvImJ_T0065617.1 MGP_129S1SvImJ_G0028261.1 mouse_genomes_project 4 44855778 44887994 - MGP_129S1SvImJ_P0065617 Coro2a protein_coding protein_coding MGP_129S1SvImJ_T0065618.1 MGP_129S1SvImJ_G0028261.1 mouse_genomes_project 4 44855784 44888012 - MGP_129S1SvImJ_P0065618 Coro2a protein_coding protein_coding MGP_129S1SvImJ_T0065619.1 MGP_129S1SvImJ_G0028261.1 mouse_genomes_project 4 44855784 44921316 - MGP_129S1SvImJ_P0065619 Coro2a protein_coding protein_coding MGP_129S1SvImJ_T0065620.1 MGP_129S1SvImJ_G0028261.1 mouse_genomes_project 4 44859366 44861507 - Coro2a protein_coding processed_transcript MGP_129S1SvImJ_T0065621.1 MGP_129S1SvImJ_G0028261.1 mouse_genomes_project 4 44860145 44861643 - Coro2a protein_coding retained_intron MGP_129S1SvImJ_T0065622.1 MGP_129S1SvImJ_G0028261.1 mouse_genomes_project 4 44861841 44884651 - Coro2a protein_coding retained_intron MGP_129S1SvImJ_T0067287.1 MGP_129S1SvImJ_G0028649.1 mouse_genomes_project 4 118222509 118241961 + MGP_129S1SvImJ_P0067287 Tmem53 protein_coding protein_coding MGP_129S1SvImJ_T0067288.1 MGP_129S1SvImJ_G0028649.1 mouse_genomes_project 4 118222598 118241895 + MGP_129S1SvImJ_P0067288 Tmem53 protein_coding protein_coding MGP_129S1SvImJ_T0067289.1 MGP_129S1SvImJ_G0028649.1 mouse_genomes_project 4 118222600 118241963 + MGP_129S1SvImJ_P0067289 Tmem53 protein_coding protein_coding MGP_129S1SvImJ_T0067290.1 MGP_129S1SvImJ_G0028649.1 mouse_genomes_project 4 118222620 118241277 + Tmem53 protein_coding processed_transcript MGP_129S1SvImJ_T0067291.1 MGP_129S1SvImJ_G0028649.1 mouse_genomes_project 4 118222898 118241961 + MGP_129S1SvImJ_P0067291 Tmem53 protein_coding protein_coding MGP_129S1SvImJ_T0067292.1 MGP_129S1SvImJ_G0028649.1 mouse_genomes_project 4 118238751 118241963 + Tmem53 protein_coding processed_transcript MGP_129S1SvImJ_T0068607.1 MGP_129S1SvImJ_G0028946.1 mouse_genomes_project 4 137985515 138017228 - MGP_129S1SvImJ_P0068607 Grhl3 protein_coding protein_coding MGP_129S1SvImJ_T0068608.1 MGP_129S1SvImJ_G0028946.1 mouse_genomes_project 4 137986286 138017022 - MGP_129S1SvImJ_P0068608 Grhl3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0101095.1 MGP_129S1SvImJ_G0039162.1 mouse_genomes_project 4 19457419 19457552 + Gm24607 snoRNA snoRNA MGP_129S1SvImJ_T0064778.1 MGP_129S1SvImJ_G0028071.1 mouse_genomes_project 4 12097871 12118851 + MGP_129S1SvImJ_P0064778 Tmem64 protein_coding protein_coding MGP_129S1SvImJ_T0068509.1 MGP_129S1SvImJ_G0028926.1 mouse_genomes_project 4 136752049 136773574 + Pafah2 protein_coding processed_transcript MGP_129S1SvImJ_T0068510.1 MGP_129S1SvImJ_G0028926.1 mouse_genomes_project 4 136752086 136767367 + Pafah2 protein_coding processed_transcript MGP_129S1SvImJ_T0068511.1 MGP_129S1SvImJ_G0028926.1 mouse_genomes_project 4 136752961 136766491 + Pafah2 protein_coding processed_transcript MGP_129S1SvImJ_T0068512.1 MGP_129S1SvImJ_G0028926.1 mouse_genomes_project 4 136753195 136782909 + MGP_129S1SvImJ_P0068512 Pafah2 protein_coding protein_coding MGP_129S1SvImJ_T0068513.1 MGP_129S1SvImJ_G0028926.1 mouse_genomes_project 4 136758366 136760520 + MGP_129S1SvImJ_P0068513 Pafah2 protein_coding protein_coding MGP_129S1SvImJ_T0068514.1 MGP_129S1SvImJ_G0028926.1 mouse_genomes_project 4 136758424 136778019 + Pafah2 protein_coding processed_transcript MGP_129S1SvImJ_T0004493.1 MGP_129S1SvImJ_G0003918.1 mouse_genomes_project 4 95102474 95121838 + Junos antisense antisense MGP_129S1SvImJ_T0004494.1 MGP_129S1SvImJ_G0003918.1 mouse_genomes_project 4 95103908 95113734 + Junos antisense antisense MGP_129S1SvImJ_T0004495.1 MGP_129S1SvImJ_G0003918.1 mouse_genomes_project 4 95104197 95226560 + Junos antisense antisense MGP_129S1SvImJ_T0004496.1 MGP_129S1SvImJ_G0003918.1 mouse_genomes_project 4 95130005 95223749 + Junos antisense antisense MGP_129S1SvImJ_T0004497.1 MGP_129S1SvImJ_G0003918.1 mouse_genomes_project 4 95130152 95203369 + Junos antisense antisense MGP_129S1SvImJ_T0004498.1 MGP_129S1SvImJ_G0003918.1 mouse_genomes_project 4 95147856 95230263 + Junos antisense antisense MGP_129S1SvImJ_T0004499.1 MGP_129S1SvImJ_G0003918.1 mouse_genomes_project 4 95153031 95234931 + Junos antisense antisense MGP_129S1SvImJ_T0004500.1 MGP_129S1SvImJ_G0003918.1 mouse_genomes_project 4 95181445 95236314 + Junos antisense antisense MGP_129S1SvImJ_T0008025.1 MGP_129S1SvImJ_G0006551.1 mouse_genomes_project 4 143860103 143865435 + 4930515B02Rik lincRNA lincRNA MGP_129S1SvImJ_T0067210.1 MGP_129S1SvImJ_G0028634.1 mouse_genomes_project 4 117638192 117737213 + MGP_129S1SvImJ_P0067210 Tesk2 protein_coding protein_coding MGP_129S1SvImJ_T0067211.1 MGP_129S1SvImJ_G0028634.1 mouse_genomes_project 4 117638213 117738927 + MGP_129S1SvImJ_P0067211 Tesk2 protein_coding protein_coding MGP_129S1SvImJ_T0067212.1 MGP_129S1SvImJ_G0028634.1 mouse_genomes_project 4 117661423 117737073 + MGP_129S1SvImJ_P0067212 Tesk2 protein_coding protein_coding MGP_129S1SvImJ_T0067213.1 MGP_129S1SvImJ_G0028634.1 mouse_genomes_project 4 117699999 117735234 + Tesk2 protein_coding processed_transcript MGP_129S1SvImJ_T0099807.1 MGP_129S1SvImJ_G0037874.1 mouse_genomes_project 4 5828418 5828524 + Gm23423 snRNA snRNA MGP_129S1SvImJ_T0066620.1 MGP_129S1SvImJ_G0028513.1 mouse_genomes_project 4 105432403 105543592 + MGP_129S1SvImJ_P0066620 1700024P16Rik protein_coding protein_coding MGP_129S1SvImJ_T0066621.1 MGP_129S1SvImJ_G0028513.1 mouse_genomes_project 4 105432629 105543594 + MGP_129S1SvImJ_P0066621 1700024P16Rik protein_coding protein_coding MGP_129S1SvImJ_T0014608.1 MGP_129S1SvImJ_G0012697.1 mouse_genomes_project 4 68860639 68861240 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004610.1 MGP_129S1SvImJ_G0004002.1 mouse_genomes_project 4 153173070 153174337 + Ube4bos3 antisense antisense MGP_129S1SvImJ_T0007901.1 MGP_129S1SvImJ_G0006462.1 mouse_genomes_project 4 91633181 91637930 + Gm12670 lincRNA lincRNA MGP_129S1SvImJ_T0065606.1 MGP_129S1SvImJ_G0028258.1 mouse_genomes_project 4 44766241 44791353 + MGP_129S1SvImJ_P0065606 Anp32b protein_coding protein_coding MGP_129S1SvImJ_T0004614.1 MGP_129S1SvImJ_G0004005.1 mouse_genomes_project 4 153326690 153331554 + antisense antisense MGP_129S1SvImJ_T0068449.1 MGP_129S1SvImJ_G0028912.1 mouse_genomes_project 4 136435468 136461127 + MGP_129S1SvImJ_P0068449 Ubxn11 protein_coding protein_coding MGP_129S1SvImJ_T0068450.1 MGP_129S1SvImJ_G0028912.1 mouse_genomes_project 4 136435473 136459535 + Ubxn11 protein_coding processed_transcript MGP_129S1SvImJ_T0068451.1 MGP_129S1SvImJ_G0028912.1 mouse_genomes_project 4 136435506 136460144 + Ubxn11 protein_coding processed_transcript MGP_129S1SvImJ_T0068452.1 MGP_129S1SvImJ_G0028912.1 mouse_genomes_project 4 136435518 136461145 + Ubxn11 protein_coding processed_transcript MGP_129S1SvImJ_T0068453.1 MGP_129S1SvImJ_G0028912.1 mouse_genomes_project 4 136435521 136450520 + MGP_129S1SvImJ_P0068453 Ubxn11 protein_coding protein_coding MGP_129S1SvImJ_T0068454.1 MGP_129S1SvImJ_G0028912.1 mouse_genomes_project 4 136435522 136443430 + Ubxn11 protein_coding processed_transcript MGP_129S1SvImJ_T0068455.1 MGP_129S1SvImJ_G0028912.1 mouse_genomes_project 4 136441584 136447334 + Ubxn11 protein_coding processed_transcript MGP_129S1SvImJ_T0068456.1 MGP_129S1SvImJ_G0028912.1 mouse_genomes_project 4 136446914 136457968 + Ubxn11 protein_coding processed_transcript MGP_129S1SvImJ_T0068457.1 MGP_129S1SvImJ_G0028912.1 mouse_genomes_project 4 136457838 136461144 + Ubxn11 protein_coding processed_transcript MGP_129S1SvImJ_T0068458.1 MGP_129S1SvImJ_G0028912.1 mouse_genomes_project 4 136458420 136460870 + MGP_129S1SvImJ_P0068458 Ubxn11 protein_coding protein_coding MGP_129S1SvImJ_T0068459.1 MGP_129S1SvImJ_G0028912.1 mouse_genomes_project 4 136460296 136461145 + Ubxn11 protein_coding processed_transcript MGP_129S1SvImJ_T0102519.1 MGP_129S1SvImJ_G0040352.1 mouse_genomes_project 4 72631198 72633676 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0069396.1 MGP_129S1SvImJ_G0029150.1 mouse_genomes_project 4 154046271 154073836 + MGP_129S1SvImJ_P0069396 Slc2a5 protein_coding protein_coding MGP_129S1SvImJ_T0069397.1 MGP_129S1SvImJ_G0029150.1 mouse_genomes_project 4 154057646 154069888 + Slc2a5 protein_coding processed_transcript MGP_129S1SvImJ_T0069398.1 MGP_129S1SvImJ_G0029150.1 mouse_genomes_project 4 154069200 154071919 + Slc2a5 protein_coding retained_intron MGP_129S1SvImJ_T0069399.1 MGP_129S1SvImJ_G0029150.1 mouse_genomes_project 4 154069401 154072505 + Slc2a5 protein_coding processed_transcript MGP_129S1SvImJ_T0010654.1 MGP_129S1SvImJ_G0008770.1 mouse_genomes_project 4 137955513 137955642 - Gm25317 miRNA miRNA MGP_129S1SvImJ_T0011580.1 MGP_129S1SvImJ_G0009696.1 mouse_genomes_project 4 32019638 32019744 + Gm23466 misc_RNA misc_RNA MGP_129S1SvImJ_T0066990.1 MGP_129S1SvImJ_G0028580.1 mouse_genomes_project 4 112732343 112759826 - MGP_129S1SvImJ_P0066990 Slc5a9 protein_coding protein_coding MGP_129S1SvImJ_T0066991.1 MGP_129S1SvImJ_G0028580.1 mouse_genomes_project 4 112732397 112740945 - Slc5a9 protein_coding processed_transcript MGP_129S1SvImJ_T0066992.1 MGP_129S1SvImJ_G0028580.1 mouse_genomes_project 4 112733241 112755689 - MGP_129S1SvImJ_P0066992 Slc5a9 protein_coding protein_coding MGP_129S1SvImJ_T0066993.1 MGP_129S1SvImJ_G0028580.1 mouse_genomes_project 4 112734215 112759662 - MGP_129S1SvImJ_P0066993 Slc5a9 protein_coding protein_coding MGP_129S1SvImJ_T0066994.1 MGP_129S1SvImJ_G0028580.1 mouse_genomes_project 4 112734459 112737596 - Slc5a9 protein_coding processed_transcript MGP_129S1SvImJ_T0066995.1 MGP_129S1SvImJ_G0028580.1 mouse_genomes_project 4 112747096 112753278 - MGP_129S1SvImJ_P0066995 Slc5a9 protein_coding protein_coding MGP_129S1SvImJ_T0066996.1 MGP_129S1SvImJ_G0028580.1 mouse_genomes_project 4 112747425 112748925 - Slc5a9 protein_coding processed_transcript MGP_129S1SvImJ_T0066997.1 MGP_129S1SvImJ_G0028580.1 mouse_genomes_project 4 112747464 112748190 - Slc5a9 protein_coding processed_transcript MGP_129S1SvImJ_T0065441.1 MGP_129S1SvImJ_G0028227.1 mouse_genomes_project 4 41983193 41987772 + MGP_129S1SvImJ_P0065441 Olfr155 protein_coding protein_coding MGP_129S1SvImJ_T0065442.1 MGP_129S1SvImJ_G0028227.1 mouse_genomes_project 4 41986793 41987965 + MGP_129S1SvImJ_P0065442 Olfr155 protein_coding protein_coding MGP_129S1SvImJ_T0004536.1 MGP_129S1SvImJ_G0003945.1 mouse_genomes_project 4 119702346 119705522 - Gm12853 antisense antisense MGP_129S1SvImJ_T0065204.1 MGP_129S1SvImJ_G0028183.1 mouse_genomes_project 4 40261442 40262562 + MGP_129S1SvImJ_P0065204 protein_coding protein_coding MGP_129S1SvImJ_T0068382.1 MGP_129S1SvImJ_G0028899.1 mouse_genomes_project 4 135849870 135865223 + MGP_129S1SvImJ_P0068382 Gpatch3 protein_coding protein_coding MGP_129S1SvImJ_T0068383.1 MGP_129S1SvImJ_G0028899.1 mouse_genomes_project 4 135857160 135860467 + Gpatch3 protein_coding processed_transcript MGP_129S1SvImJ_T0004487.1 MGP_129S1SvImJ_G0003913.1 mouse_genomes_project 4 82970659 82985732 - Gm11413 antisense antisense MGP_129S1SvImJ_T0007850.1 MGP_129S1SvImJ_G0006421.1 mouse_genomes_project 4 46408418 46410224 + Gm12434 lincRNA lincRNA MGP_129S1SvImJ_T0067315.1 MGP_129S1SvImJ_G0028655.1 mouse_genomes_project 4 118837094 118846333 + MGP_129S1SvImJ_P0067315 Slc6a9 protein_coding protein_coding MGP_129S1SvImJ_T0067316.1 MGP_129S1SvImJ_G0028655.1 mouse_genomes_project 4 118837432 118878394 + MGP_129S1SvImJ_P0067316 Slc6a9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067317.1 MGP_129S1SvImJ_G0028655.1 mouse_genomes_project 4 118837473 118872496 + MGP_129S1SvImJ_P0067317 Slc6a9 protein_coding protein_coding MGP_129S1SvImJ_T0067318.1 MGP_129S1SvImJ_G0028655.1 mouse_genomes_project 4 118837537 118860375 + Slc6a9 protein_coding processed_transcript MGP_129S1SvImJ_T0067319.1 MGP_129S1SvImJ_G0028655.1 mouse_genomes_project 4 118852416 118867208 + MGP_129S1SvImJ_P0067319 Slc6a9 protein_coding protein_coding MGP_129S1SvImJ_T0067320.1 MGP_129S1SvImJ_G0028655.1 mouse_genomes_project 4 118852422 118867208 + MGP_129S1SvImJ_P0067320 Slc6a9 protein_coding protein_coding MGP_129S1SvImJ_T0067321.1 MGP_129S1SvImJ_G0028655.1 mouse_genomes_project 4 118852593 118871624 + MGP_129S1SvImJ_P0067321 Slc6a9 protein_coding protein_coding MGP_129S1SvImJ_T0067322.1 MGP_129S1SvImJ_G0028655.1 mouse_genomes_project 4 118858705 118860631 + MGP_129S1SvImJ_P0067322 Slc6a9 protein_coding protein_coding MGP_129S1SvImJ_T0067323.1 MGP_129S1SvImJ_G0028655.1 mouse_genomes_project 4 118858757 118859241 + Slc6a9 protein_coding processed_transcript MGP_129S1SvImJ_T0067337.1 MGP_129S1SvImJ_G0028655.1 mouse_genomes_project 4 118877279 118878396 + Slc6a9 protein_coding retained_intron MGP_129S1SvImJ_T0004504.1 MGP_129S1SvImJ_G0003920.1 mouse_genomes_project 4 98970767 98976379 + Kank4os antisense antisense MGP_129S1SvImJ_T0069499.1 MGP_129S1SvImJ_G0029170.1 mouse_genomes_project 4 156138277 156151153 + Nol9 protein_coding retained_intron MGP_129S1SvImJ_T0069500.1 MGP_129S1SvImJ_G0029170.1 mouse_genomes_project 4 156138283 156158929 + MGP_129S1SvImJ_P0069500 Nol9 protein_coding protein_coding MGP_129S1SvImJ_T0069501.1 MGP_129S1SvImJ_G0029170.1 mouse_genomes_project 4 156138292 156155311 + Nol9 protein_coding retained_intron MGP_129S1SvImJ_T0069502.1 MGP_129S1SvImJ_G0029170.1 mouse_genomes_project 4 156138292 156160399 + MGP_129S1SvImJ_P0069502 Nol9 protein_coding protein_coding MGP_129S1SvImJ_T0069503.1 MGP_129S1SvImJ_G0029170.1 mouse_genomes_project 4 156138319 156158947 + MGP_129S1SvImJ_P0069503 Nol9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067587.1 MGP_129S1SvImJ_G0028720.1 mouse_genomes_project 4 122362718 122406347 - MGP_129S1SvImJ_P0067587 Zmpste24 protein_coding protein_coding MGP_129S1SvImJ_T0067588.1 MGP_129S1SvImJ_G0028720.1 mouse_genomes_project 4 122374177 122383152 - Zmpste24 protein_coding processed_transcript MGP_129S1SvImJ_T0067589.1 MGP_129S1SvImJ_G0028720.1 mouse_genomes_project 4 122389767 122403804 - MGP_129S1SvImJ_P0067589 Zmpste24 protein_coding protein_coding MGP_129S1SvImJ_T0068311.1 MGP_129S1SvImJ_G0028881.1 mouse_genomes_project 4 135024972 135043000 - MGP_129S1SvImJ_P0068311 protein_coding protein_coding MGP_129S1SvImJ_T0068312.1 MGP_129S1SvImJ_G0028881.1 mouse_genomes_project 4 135025870 135042954 - MGP_129S1SvImJ_P0068312 protein_coding protein_coding MGP_129S1SvImJ_T0068313.1 MGP_129S1SvImJ_G0028881.1 mouse_genomes_project 4 135027011 135032772 - protein_coding processed_transcript MGP_129S1SvImJ_T0068314.1 MGP_129S1SvImJ_G0028881.1 mouse_genomes_project 4 135028565 135042955 - protein_coding processed_transcript MGP_129S1SvImJ_T0068315.1 MGP_129S1SvImJ_G0028881.1 mouse_genomes_project 4 135034493 135042965 - protein_coding processed_transcript MGP_129S1SvImJ_T0101137.1 MGP_129S1SvImJ_G0039204.1 mouse_genomes_project 4 93572197 93572326 - Gm23443 snoRNA snoRNA MGP_129S1SvImJ_T0099874.1 MGP_129S1SvImJ_G0037941.1 mouse_genomes_project 4 131382347 131382487 + Gm24621 snRNA snRNA MGP_129S1SvImJ_T0065140.1 MGP_129S1SvImJ_G0028164.1 mouse_genomes_project 4 39466035 39524052 - MGP_129S1SvImJ_P0065140 Fam219a protein_coding protein_coding MGP_129S1SvImJ_T0065141.1 MGP_129S1SvImJ_G0028164.1 mouse_genomes_project 4 39466035 39524080 - MGP_129S1SvImJ_P0065141 Fam219a protein_coding protein_coding MGP_129S1SvImJ_T0065142.1 MGP_129S1SvImJ_G0028164.1 mouse_genomes_project 4 39466035 39524080 - MGP_129S1SvImJ_P0065142 Fam219a protein_coding protein_coding MGP_129S1SvImJ_T0065143.1 MGP_129S1SvImJ_G0028164.1 mouse_genomes_project 4 39468678 39473129 - Fam219a protein_coding processed_transcript MGP_129S1SvImJ_T0065144.1 MGP_129S1SvImJ_G0028164.1 mouse_genomes_project 4 39472474 39524081 - Fam219a protein_coding processed_transcript MGP_129S1SvImJ_T0069143.1 MGP_129S1SvImJ_G0029095.1 mouse_genomes_project 4 147935521 147947835 - MGP_129S1SvImJ_P0069143 Gm13124 protein_coding protein_coding MGP_129S1SvImJ_T0014463.1 MGP_129S1SvImJ_G0012552.1 mouse_genomes_project 4 19592880 19593280 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064607.1 MGP_129S1SvImJ_G0028035.1 mouse_genomes_project 4 2869176 2901801 + MGP_129S1SvImJ_P0064607 Sdcbp protein_coding protein_coding MGP_129S1SvImJ_T0064608.1 MGP_129S1SvImJ_G0028035.1 mouse_genomes_project 4 2869203 2901172 + MGP_129S1SvImJ_P0064608 Sdcbp protein_coding protein_coding MGP_129S1SvImJ_T0064609.1 MGP_129S1SvImJ_G0028035.1 mouse_genomes_project 4 2869234 2877652 + Sdcbp protein_coding processed_transcript MGP_129S1SvImJ_T0064610.1 MGP_129S1SvImJ_G0028035.1 mouse_genomes_project 4 2869235 2898628 + MGP_129S1SvImJ_P0064610 Sdcbp protein_coding protein_coding MGP_129S1SvImJ_T0064611.1 MGP_129S1SvImJ_G0028035.1 mouse_genomes_project 4 2869238 2889739 + Sdcbp protein_coding processed_transcript MGP_129S1SvImJ_T0064612.1 MGP_129S1SvImJ_G0028035.1 mouse_genomes_project 4 2869239 2913926 + MGP_129S1SvImJ_P0064612 Sdcbp protein_coding protein_coding MGP_129S1SvImJ_T0064613.1 MGP_129S1SvImJ_G0028035.1 mouse_genomes_project 4 2869239 2890574 + MGP_129S1SvImJ_P0064613 Sdcbp protein_coding protein_coding MGP_129S1SvImJ_T0064614.1 MGP_129S1SvImJ_G0028035.1 mouse_genomes_project 4 2880363 2898512 + MGP_129S1SvImJ_P0064614 Sdcbp protein_coding protein_coding MGP_129S1SvImJ_T0004528.1 MGP_129S1SvImJ_G0003938.1 mouse_genomes_project 4 117450426 117451334 + Gm12953 antisense antisense MGP_129S1SvImJ_T0007943.1 MGP_129S1SvImJ_G0006495.1 mouse_genomes_project 4 118486002 118490158 + Gm12827 lincRNA lincRNA MGP_129S1SvImJ_T0065116.1 MGP_129S1SvImJ_G0028158.1 mouse_genomes_project 4 39227337 39252431 - MGP_129S1SvImJ_P0065116 Dcaf12 protein_coding protein_coding MGP_129S1SvImJ_T0099878.1 MGP_129S1SvImJ_G0037945.1 mouse_genomes_project 4 135138508 135138615 - Gm24913 snRNA snRNA MGP_129S1SvImJ_T0066525.1 MGP_129S1SvImJ_G0028495.1 mouse_genomes_project 4 102035016 102131757 + MGP_129S1SvImJ_P0066525 Lepr protein_coding protein_coding MGP_129S1SvImJ_T0066526.1 MGP_129S1SvImJ_G0028495.1 mouse_genomes_project 4 102035016 102133442 + MGP_129S1SvImJ_P0066526 Lepr protein_coding protein_coding MGP_129S1SvImJ_T0066527.1 MGP_129S1SvImJ_G0028495.1 mouse_genomes_project 4 102035016 102112624 + MGP_129S1SvImJ_P0066527 Lepr protein_coding protein_coding MGP_129S1SvImJ_T0066528.1 MGP_129S1SvImJ_G0028495.1 mouse_genomes_project 4 102035019 102057777 + MGP_129S1SvImJ_P0066528 Lepr protein_coding protein_coding MGP_129S1SvImJ_T0066529.1 MGP_129S1SvImJ_G0028495.1 mouse_genomes_project 4 102088989 102102049 + Lepr protein_coding processed_transcript MGP_129S1SvImJ_T0066530.1 MGP_129S1SvImJ_G0028495.1 mouse_genomes_project 4 102092533 102105336 + Lepr protein_coding processed_transcript MGP_129S1SvImJ_T0066531.1 MGP_129S1SvImJ_G0028495.1 mouse_genomes_project 4 102109320 102112522 + Lepr protein_coding processed_transcript MGP_129S1SvImJ_T0065883.1 MGP_129S1SvImJ_G0028334.1 mouse_genomes_project 4 58084626 58121733 + MGP_129S1SvImJ_P0065883 Ugcg protein_coding protein_coding MGP_129S1SvImJ_T0065884.1 MGP_129S1SvImJ_G0028334.1 mouse_genomes_project 4 58084924 58110043 + Ugcg protein_coding processed_transcript MGP_129S1SvImJ_T0065885.1 MGP_129S1SvImJ_G0028334.1 mouse_genomes_project 4 58109559 58111751 + Ugcg protein_coding processed_transcript MGP_129S1SvImJ_T0065886.1 MGP_129S1SvImJ_G0028334.1 mouse_genomes_project 4 58110495 58112135 + Ugcg protein_coding processed_transcript MGP_129S1SvImJ_T0004550.1 MGP_129S1SvImJ_G0003956.1 mouse_genomes_project 4 126455270 126459163 - 1700125G02Rik antisense antisense MGP_129S1SvImJ_T0068355.1 MGP_129S1SvImJ_G0028891.1 mouse_genomes_project 4 135501925 135514726 - MGP_129S1SvImJ_P0068355 Tmem222 protein_coding protein_coding MGP_129S1SvImJ_T0068356.1 MGP_129S1SvImJ_G0028891.1 mouse_genomes_project 4 135502710 135514596 - MGP_129S1SvImJ_P0068356 Tmem222 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068357.1 MGP_129S1SvImJ_G0028891.1 mouse_genomes_project 4 135502756 135514704 - MGP_129S1SvImJ_P0068357 Tmem222 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068358.1 MGP_129S1SvImJ_G0028891.1 mouse_genomes_project 4 135502767 135514552 - MGP_129S1SvImJ_P0068358 Tmem222 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068359.1 MGP_129S1SvImJ_G0028891.1 mouse_genomes_project 4 135502782 135505987 - Tmem222 protein_coding retained_intron MGP_129S1SvImJ_T0068360.1 MGP_129S1SvImJ_G0028891.1 mouse_genomes_project 4 135506762 135514685 - Tmem222 protein_coding retained_intron MGP_129S1SvImJ_T0010658.1 MGP_129S1SvImJ_G0008774.1 mouse_genomes_project 4 140176354 140176439 + Mir7018 miRNA miRNA MGP_129S1SvImJ_T0011589.1 MGP_129S1SvImJ_G0009705.1 mouse_genomes_project 4 53369954 53370242 + Gm24628 misc_RNA misc_RNA MGP_129S1SvImJ_T0014526.1 MGP_129S1SvImJ_G0012615.1 mouse_genomes_project 4 37100289 37101050 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014414.1 MGP_129S1SvImJ_G0012503.1 mouse_genomes_project 4 6598409 6599332 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065024.1 MGP_129S1SvImJ_G0028136.1 mouse_genomes_project 4 32772046 32773996 + MGP_129S1SvImJ_P0065024 Ifnk protein_coding protein_coding MGP_129S1SvImJ_T0018074.1 MGP_129S1SvImJ_G0015541.1 mouse_genomes_project 4 32842326 32855339 + Gm12367 processed_transcript processed_transcript MGP_129S1SvImJ_T0018075.1 MGP_129S1SvImJ_G0015541.1 mouse_genomes_project 4 32842344 32855437 + Gm12367 processed_transcript processed_transcript MGP_129S1SvImJ_T0018076.1 MGP_129S1SvImJ_G0015541.1 mouse_genomes_project 4 32842361 32881462 + Gm12367 processed_transcript processed_transcript MGP_129S1SvImJ_T0098586.1 MGP_129S1SvImJ_G0036671.1 mouse_genomes_project 4 39239189 39239304 + n-R5s183 rRNA rRNA MGP_129S1SvImJ_T0068758.1 MGP_129S1SvImJ_G0028986.1 mouse_genomes_project 4 140320896 140378509 + Rap1gap protein_coding processed_transcript MGP_129S1SvImJ_T0068759.1 MGP_129S1SvImJ_G0028986.1 mouse_genomes_project 4 140320924 140373716 + Rap1gap protein_coding retained_intron MGP_129S1SvImJ_T0068760.1 MGP_129S1SvImJ_G0028986.1 mouse_genomes_project 4 140336798 140392591 + MGP_129S1SvImJ_P0068760 Rap1gap protein_coding protein_coding MGP_129S1SvImJ_T0068761.1 MGP_129S1SvImJ_G0028986.1 mouse_genomes_project 4 140336798 140380686 + MGP_129S1SvImJ_P0068761 Rap1gap protein_coding protein_coding MGP_129S1SvImJ_T0068762.1 MGP_129S1SvImJ_G0028986.1 mouse_genomes_project 4 140336798 140377729 + MGP_129S1SvImJ_P0068762 Rap1gap protein_coding protein_coding MGP_129S1SvImJ_T0068763.1 MGP_129S1SvImJ_G0028986.1 mouse_genomes_project 4 140337712 140392590 + MGP_129S1SvImJ_P0068763 Rap1gap protein_coding protein_coding MGP_129S1SvImJ_T0068764.1 MGP_129S1SvImJ_G0028986.1 mouse_genomes_project 4 140343451 140377760 + Rap1gap protein_coding processed_transcript MGP_129S1SvImJ_T0068765.1 MGP_129S1SvImJ_G0028986.1 mouse_genomes_project 4 140369395 140392591 + MGP_129S1SvImJ_P0068765 Rap1gap protein_coding protein_coding MGP_129S1SvImJ_T0068766.1 MGP_129S1SvImJ_G0028986.1 mouse_genomes_project 4 140381601 140391088 + MGP_129S1SvImJ_P0068766 Rap1gap protein_coding protein_coding MGP_129S1SvImJ_T0068767.1 MGP_129S1SvImJ_G0028986.1 mouse_genomes_project 4 140386718 140392591 + Rap1gap protein_coding retained_intron MGP_129S1SvImJ_T0068768.1 MGP_129S1SvImJ_G0028986.1 mouse_genomes_project 4 140388058 140389787 + Rap1gap protein_coding retained_intron MGP_129S1SvImJ_T0068769.1 MGP_129S1SvImJ_G0028986.1 mouse_genomes_project 4 140390491 140391666 + Rap1gap protein_coding retained_intron MGP_129S1SvImJ_T0068770.1 MGP_129S1SvImJ_G0028986.1 mouse_genomes_project 4 140390910 140391549 + Rap1gap protein_coding retained_intron MGP_129S1SvImJ_T0068771.1 MGP_129S1SvImJ_G0028986.1 mouse_genomes_project 4 140390940 140392432 + Rap1gap protein_coding retained_intron MGP_129S1SvImJ_T0067354.1 MGP_129S1SvImJ_G0028660.1 mouse_genomes_project 4 118898733 118904910 - Ipo13 protein_coding processed_transcript MGP_129S1SvImJ_T0067355.1 MGP_129S1SvImJ_G0028660.1 mouse_genomes_project 4 118898733 118919859 - MGP_129S1SvImJ_P0067355 Ipo13 protein_coding protein_coding MGP_129S1SvImJ_T0067356.1 MGP_129S1SvImJ_G0028660.1 mouse_genomes_project 4 118898874 118899362 - Ipo13 protein_coding processed_transcript MGP_129S1SvImJ_T0067357.1 MGP_129S1SvImJ_G0028660.1 mouse_genomes_project 4 118899139 118900121 - Ipo13 protein_coding processed_transcript MGP_129S1SvImJ_T0067358.1 MGP_129S1SvImJ_G0028660.1 mouse_genomes_project 4 118899587 118900140 - Ipo13 protein_coding processed_transcript MGP_129S1SvImJ_T0067359.1 MGP_129S1SvImJ_G0028660.1 mouse_genomes_project 4 118905202 118908115 - Ipo13 protein_coding processed_transcript MGP_129S1SvImJ_T0067556.1 MGP_129S1SvImJ_G0028711.1 mouse_genomes_project 4 121850311 121878095 + MGP_129S1SvImJ_P0067556 Gm8439 protein_coding protein_coding MGP_129S1SvImJ_T0004533.1 MGP_129S1SvImJ_G0003942.1 mouse_genomes_project 4 118426880 118435885 + Gm12828 antisense antisense MGP_129S1SvImJ_T0069910.1 MGP_129S1SvImJ_G0029244.1 mouse_genomes_project 4 160395700 160398428 + MGP_129S1SvImJ_P0069910 Tnfrsf18 protein_coding protein_coding MGP_129S1SvImJ_T0069911.1 MGP_129S1SvImJ_G0029244.1 mouse_genomes_project 4 160395868 160398424 + Tnfrsf18 protein_coding retained_intron MGP_129S1SvImJ_T0069912.1 MGP_129S1SvImJ_G0029244.1 mouse_genomes_project 4 160395878 160398424 + MGP_129S1SvImJ_P0069912 Tnfrsf18 protein_coding protein_coding MGP_129S1SvImJ_T0069913.1 MGP_129S1SvImJ_G0029244.1 mouse_genomes_project 4 160395878 160398424 + MGP_129S1SvImJ_P0069913 Tnfrsf18 protein_coding protein_coding MGP_129S1SvImJ_T0069914.1 MGP_129S1SvImJ_G0029244.1 mouse_genomes_project 4 160395914 160397908 + Tnfrsf18 protein_coding processed_transcript MGP_129S1SvImJ_T0069915.1 MGP_129S1SvImJ_G0029244.1 mouse_genomes_project 4 160397904 160398428 + Tnfrsf18 protein_coding processed_transcript MGP_129S1SvImJ_T0101120.1 MGP_129S1SvImJ_G0039187.1 mouse_genomes_project 4 55667000 55667132 - Gm25053 snoRNA snoRNA MGP_129S1SvImJ_T0064568.1 MGP_129S1SvImJ_G0028025.1 mouse_genomes_project 4 360334 361783 - MGP_129S1SvImJ_P0064568 Mos protein_coding protein_coding MGP_129S1SvImJ_T0004625.1 MGP_129S1SvImJ_G0004015.1 mouse_genomes_project 4 158833721 158841087 + Gm13133 antisense antisense MGP_129S1SvImJ_T0014623.1 MGP_129S1SvImJ_G0012712.1 mouse_genomes_project 4 73955616 73956687 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014815.1 MGP_129S1SvImJ_G0012904.1 mouse_genomes_project 4 138172075 138180342 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069829.1 MGP_129S1SvImJ_G0029226.1 mouse_genomes_project 4 160128229 160136943 - MGP_129S1SvImJ_P0069829 Vwa1 protein_coding protein_coding MGP_129S1SvImJ_T0010633.1 MGP_129S1SvImJ_G0008749.1 mouse_genomes_project 4 122051396 122051485 - Mir30c-1 miRNA miRNA MGP_129S1SvImJ_T0065818.1 MGP_129S1SvImJ_G0028316.1 mouse_genomes_project 4 55972457 56055918 - MGP_129S1SvImJ_P0065818 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0065819.1 MGP_129S1SvImJ_G0028316.1 mouse_genomes_project 4 56000978 56004687 - protein_coding processed_transcript MGP_129S1SvImJ_T0065820.1 MGP_129S1SvImJ_G0028316.1 mouse_genomes_project 4 56027556 56084223 - MGP_129S1SvImJ_P0065820 protein_coding protein_coding MGP_129S1SvImJ_T0065821.1 MGP_129S1SvImJ_G0028316.1 mouse_genomes_project 4 56037403 56084763 - protein_coding processed_transcript MGP_129S1SvImJ_T0065822.1 MGP_129S1SvImJ_G0028316.1 mouse_genomes_project 4 56048141 56085355 - MGP_129S1SvImJ_P0065822 protein_coding protein_coding MGP_129S1SvImJ_T0065823.1 MGP_129S1SvImJ_G0028316.1 mouse_genomes_project 4 56052995 56084604 - MGP_129S1SvImJ_P0065823 protein_coding protein_coding MGP_129S1SvImJ_T0066624.1 MGP_129S1SvImJ_G0028516.1 mouse_genomes_project 4 106368904 106373600 + MGP_129S1SvImJ_P0066624 Gm12728 protein_coding protein_coding MGP_129S1SvImJ_T0066625.1 MGP_129S1SvImJ_G0028516.1 mouse_genomes_project 4 106369569 106373600 + MGP_129S1SvImJ_P0066625 Gm12728 protein_coding protein_coding MGP_129S1SvImJ_T0066626.1 MGP_129S1SvImJ_G0028516.1 mouse_genomes_project 4 106373390 106373883 + Gm12728 protein_coding translated_processed_pseudogene MGP_129S1SvImJ_T0068476.1 MGP_129S1SvImJ_G0028917.1 mouse_genomes_project 4 136565303 136575632 - MGP_129S1SvImJ_P0068476 Cnksr1 protein_coding protein_coding MGP_129S1SvImJ_T0068477.1 MGP_129S1SvImJ_G0028917.1 mouse_genomes_project 4 136565311 136575572 - Cnksr1 protein_coding processed_transcript MGP_129S1SvImJ_T0068478.1 MGP_129S1SvImJ_G0028917.1 mouse_genomes_project 4 136566616 136567691 - Cnksr1 protein_coding processed_transcript MGP_129S1SvImJ_T0068479.1 MGP_129S1SvImJ_G0028917.1 mouse_genomes_project 4 136567680 136570431 - Cnksr1 protein_coding processed_transcript MGP_129S1SvImJ_T0068480.1 MGP_129S1SvImJ_G0028917.1 mouse_genomes_project 4 136569742 136573218 - Cnksr1 protein_coding processed_transcript MGP_129S1SvImJ_T0064757.1 MGP_129S1SvImJ_G0028064.1 mouse_genomes_project 4 9659900 9726298 + MGP_129S1SvImJ_P0064757 Triqk protein_coding protein_coding MGP_129S1SvImJ_T0064758.1 MGP_129S1SvImJ_G0028064.1 mouse_genomes_project 4 9659920 9728833 + MGP_129S1SvImJ_P0064758 Triqk protein_coding protein_coding MGP_129S1SvImJ_T0064759.1 MGP_129S1SvImJ_G0028064.1 mouse_genomes_project 4 9671029 9726495 + Triqk protein_coding processed_transcript MGP_129S1SvImJ_T0068371.1 MGP_129S1SvImJ_G0028895.1 mouse_genomes_project 4 135744996 135752402 - MGP_129S1SvImJ_P0068371 Trnp1 protein_coding protein_coding MGP_129S1SvImJ_T0068372.1 MGP_129S1SvImJ_G0028895.1 mouse_genomes_project 4 135745014 135751571 - Trnp1 protein_coding processed_transcript MGP_129S1SvImJ_T0067742.1 MGP_129S1SvImJ_G0028766.1 mouse_genomes_project 4 127097130 127323691 + MGP_129S1SvImJ_P0067742 Grik3 protein_coding protein_coding MGP_129S1SvImJ_T0067933.1 MGP_129S1SvImJ_G0028811.1 mouse_genomes_project 4 130911208 130938548 + MGP_129S1SvImJ_P0067933 Rnf19b protein_coding protein_coding MGP_129S1SvImJ_T0067934.1 MGP_129S1SvImJ_G0028811.1 mouse_genomes_project 4 130911208 130939757 + MGP_129S1SvImJ_P0067934 Rnf19b protein_coding protein_coding MGP_129S1SvImJ_T0067935.1 MGP_129S1SvImJ_G0028811.1 mouse_genomes_project 4 130911346 130934585 + MGP_129S1SvImJ_P0067935 Rnf19b protein_coding protein_coding MGP_129S1SvImJ_T0067936.1 MGP_129S1SvImJ_G0028811.1 mouse_genomes_project 4 130911751 130938548 + MGP_129S1SvImJ_P0067936 Rnf19b protein_coding protein_coding MGP_129S1SvImJ_T0067937.1 MGP_129S1SvImJ_G0028811.1 mouse_genomes_project 4 130933006 130939908 + MGP_129S1SvImJ_P0067937 Rnf19b protein_coding protein_coding MGP_129S1SvImJ_T0067938.1 MGP_129S1SvImJ_G0028811.1 mouse_genomes_project 4 130937906 130939908 + Rnf19b protein_coding processed_transcript MGP_129S1SvImJ_T0067369.1 MGP_129S1SvImJ_G0028663.1 mouse_genomes_project 4 119163790 119208091 - MGP_129S1SvImJ_P0067369 Kdm4a protein_coding protein_coding MGP_129S1SvImJ_T0067370.1 MGP_129S1SvImJ_G0028663.1 mouse_genomes_project 4 119163792 119207702 - MGP_129S1SvImJ_P0067370 Kdm4a protein_coding protein_coding MGP_129S1SvImJ_T0067371.1 MGP_129S1SvImJ_G0028663.1 mouse_genomes_project 4 119163839 119208026 - MGP_129S1SvImJ_P0067371 Kdm4a protein_coding protein_coding MGP_129S1SvImJ_T0067372.1 MGP_129S1SvImJ_G0028663.1 mouse_genomes_project 4 119168844 119207994 - MGP_129S1SvImJ_P0067372 Kdm4a protein_coding protein_coding MGP_129S1SvImJ_T0067373.1 MGP_129S1SvImJ_G0028663.1 mouse_genomes_project 4 119172586 119173561 - Kdm4a protein_coding processed_transcript MGP_129S1SvImJ_T0067374.1 MGP_129S1SvImJ_G0028663.1 mouse_genomes_project 4 119175852 119188461 - Kdm4a protein_coding processed_transcript MGP_129S1SvImJ_T0004602.1 MGP_129S1SvImJ_G0003997.1 mouse_genomes_project 4 151759890 151761511 - Gm13201 antisense antisense MGP_129S1SvImJ_T0004603.1 MGP_129S1SvImJ_G0003997.1 mouse_genomes_project 4 151760105 151763475 - Gm13201 antisense antisense MGP_129S1SvImJ_T0014447.1 MGP_129S1SvImJ_G0012536.1 mouse_genomes_project 4 14198816 14199077 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067417.1 MGP_129S1SvImJ_G0028673.1 mouse_genomes_project 4 119617723 119690409 - MGP_129S1SvImJ_P0067417 Cfap57 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0064812.1 MGP_129S1SvImJ_G0028086.1 mouse_genomes_project 4 17011848 17030054 + MGP_129S1SvImJ_P0064812 Ttpa protein_coding protein_coding MGP_129S1SvImJ_T0064813.1 MGP_129S1SvImJ_G0028086.1 mouse_genomes_project 4 17012353 17038885 + MGP_129S1SvImJ_P0064813 Ttpa protein_coding protein_coding MGP_129S1SvImJ_T0014800.1 MGP_129S1SvImJ_G0012889.1 mouse_genomes_project 4 131718121 131718410 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069170.1 MGP_129S1SvImJ_G0029105.1 mouse_genomes_project 4 151289827 151293830 - MGP_129S1SvImJ_P0069170 protein_coding protein_coding MGP_129S1SvImJ_T0064990.1 MGP_129S1SvImJ_G0028128.1 mouse_genomes_project 4 32200261 32245467 + MGP_129S1SvImJ_P0064990 Rars2 protein_coding protein_coding MGP_129S1SvImJ_T0064991.1 MGP_129S1SvImJ_G0028128.1 mouse_genomes_project 4 32200265 32204224 + Rars2 protein_coding processed_transcript MGP_129S1SvImJ_T0064992.1 MGP_129S1SvImJ_G0028128.1 mouse_genomes_project 4 32200273 32210742 + Rars2 protein_coding processed_transcript MGP_129S1SvImJ_T0064993.1 MGP_129S1SvImJ_G0028128.1 mouse_genomes_project 4 32200278 32245463 + Rars2 protein_coding processed_transcript MGP_129S1SvImJ_T0064994.1 MGP_129S1SvImJ_G0028128.1 mouse_genomes_project 4 32200280 32215869 + MGP_129S1SvImJ_P0064994 Rars2 protein_coding protein_coding MGP_129S1SvImJ_T0064995.1 MGP_129S1SvImJ_G0028128.1 mouse_genomes_project 4 32200282 32208734 + Rars2 protein_coding processed_transcript MGP_129S1SvImJ_T0064996.1 MGP_129S1SvImJ_G0028128.1 mouse_genomes_project 4 32233010 32241477 + Rars2 protein_coding processed_transcript MGP_129S1SvImJ_T0004478.1 MGP_129S1SvImJ_G0003904.1 mouse_genomes_project 4 58820278 58825215 - Gm12542 antisense antisense MGP_129S1SvImJ_T0099889.1 MGP_129S1SvImJ_G0037956.1 mouse_genomes_project 4 152268501 152268605 + Gm24002 snRNA snRNA MGP_129S1SvImJ_T0014499.1 MGP_129S1SvImJ_G0012588.1 mouse_genomes_project 4 29484034 29486669 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066631.1 MGP_129S1SvImJ_G0028518.1 mouse_genomes_project 4 107054126 107079953 - MGP_129S1SvImJ_P0066631 Pcsk9 protein_coding protein_coding MGP_129S1SvImJ_T0069108.1 MGP_129S1SvImJ_G0029069.1 mouse_genomes_project 4 146641347 146649822 + MGP_129S1SvImJ_P0069108 Pramef8 protein_coding protein_coding MGP_129S1SvImJ_T0069109.1 MGP_129S1SvImJ_G0029069.1 mouse_genomes_project 4 146641893 146645573 + MGP_129S1SvImJ_P0069109 Pramef8 protein_coding protein_coding MGP_129S1SvImJ_T0069110.1 MGP_129S1SvImJ_G0029069.1 mouse_genomes_project 4 146641908 146649822 + MGP_129S1SvImJ_P0069110 Pramef8 protein_coding protein_coding MGP_129S1SvImJ_T0069111.1 MGP_129S1SvImJ_G0029069.1 mouse_genomes_project 4 146641930 146646399 + MGP_129S1SvImJ_P0069111 Pramef8 protein_coding protein_coding MGP_129S1SvImJ_T0069112.1 MGP_129S1SvImJ_G0029069.1 mouse_genomes_project 4 146641931 146643106 + Pramef8 protein_coding processed_transcript MGP_129S1SvImJ_T0066337.1 MGP_129S1SvImJ_G0028453.1 mouse_genomes_project 4 94798621 94933122 + MGP_129S1SvImJ_P0066337 Tek protein_coding protein_coding MGP_129S1SvImJ_T0066338.1 MGP_129S1SvImJ_G0028453.1 mouse_genomes_project 4 94798632 94933085 + MGP_129S1SvImJ_P0066338 Tek protein_coding protein_coding MGP_129S1SvImJ_T0066339.1 MGP_129S1SvImJ_G0028453.1 mouse_genomes_project 4 94798850 94932828 + MGP_129S1SvImJ_P0066339 Tek protein_coding protein_coding MGP_129S1SvImJ_T0066340.1 MGP_129S1SvImJ_G0028453.1 mouse_genomes_project 4 94868356 94878786 + Tek protein_coding processed_transcript MGP_129S1SvImJ_T0007815.1 MGP_129S1SvImJ_G0006388.1 mouse_genomes_project 4 9021138 9065786 + Gm11846 lincRNA lincRNA MGP_129S1SvImJ_T0067434.1 MGP_129S1SvImJ_G0028684.1 mouse_genomes_project 4 120068353 120073305 - MGP_129S1SvImJ_P0067434 protein_coding protein_coding MGP_129S1SvImJ_T0069488.1 MGP_129S1SvImJ_G0029167.1 mouse_genomes_project 4 156105945 156114845 + MGP_129S1SvImJ_P0069488 Klhl21 protein_coding protein_coding MGP_129S1SvImJ_T0014829.1 MGP_129S1SvImJ_G0012918.1 mouse_genomes_project 4 144410799 144411003 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010626.1 MGP_129S1SvImJ_G0008742.1 mouse_genomes_project 4 101648195 101648278 - Mir101a miRNA miRNA MGP_129S1SvImJ_T0069008.1 MGP_129S1SvImJ_G0029043.1 mouse_genomes_project 4 144348881 144376938 + MGP_129S1SvImJ_P0069008 Epha2 protein_coding protein_coding MGP_129S1SvImJ_T0069009.1 MGP_129S1SvImJ_G0029043.1 mouse_genomes_project 4 144350048 144356434 + Epha2 protein_coding processed_transcript MGP_129S1SvImJ_T0069010.1 MGP_129S1SvImJ_G0029043.1 mouse_genomes_project 4 144356593 144358679 + Epha2 protein_coding processed_transcript MGP_129S1SvImJ_T0069011.1 MGP_129S1SvImJ_G0029043.1 mouse_genomes_project 4 144364639 144368493 + Epha2 protein_coding processed_transcript MGP_129S1SvImJ_T0010657.1 MGP_129S1SvImJ_G0008773.1 mouse_genomes_project 4 139788918 139788994 + Gm23263 miRNA miRNA MGP_129S1SvImJ_T0065406.1 MGP_129S1SvImJ_G0028216.1 mouse_genomes_project 4 41709171 41710450 - MGP_129S1SvImJ_P0065406 Msmp protein_coding protein_coding MGP_129S1SvImJ_T0102525.1 MGP_129S1SvImJ_G0040358.1 mouse_genomes_project 4 88572058 88572603 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099885.1 MGP_129S1SvImJ_G0037952.1 mouse_genomes_project 4 141614260 141614361 - Gm25280 snRNA snRNA MGP_129S1SvImJ_T0007930.1 MGP_129S1SvImJ_G0006486.1 mouse_genomes_project 4 108372894 108449159 + 1700047F07Rik lincRNA lincRNA MGP_129S1SvImJ_T0007931.1 MGP_129S1SvImJ_G0006486.1 mouse_genomes_project 4 108372926 108391801 + 1700047F07Rik lincRNA lincRNA MGP_129S1SvImJ_T0007932.1 MGP_129S1SvImJ_G0006486.1 mouse_genomes_project 4 108390247 108400185 + 1700047F07Rik lincRNA lincRNA MGP_129S1SvImJ_T0007933.1 MGP_129S1SvImJ_G0006486.1 mouse_genomes_project 4 108390270 108391858 + 1700047F07Rik lincRNA lincRNA MGP_129S1SvImJ_T0010587.1 MGP_129S1SvImJ_G0008703.1 mouse_genomes_project 4 10013743 10013809 - Gm26250 miRNA miRNA MGP_129S1SvImJ_T0101162.1 MGP_129S1SvImJ_G0039229.1 mouse_genomes_project 4 134449296 134449433 + Snora16a snoRNA snoRNA MGP_129S1SvImJ_T0004455.1 MGP_129S1SvImJ_G0003884.1 mouse_genomes_project 4 37233637 37283854 - Gm17094 antisense antisense MGP_129S1SvImJ_T0014610.1 MGP_129S1SvImJ_G0012699.1 mouse_genomes_project 4 69134456 69135567 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004553.1 MGP_129S1SvImJ_G0003959.1 mouse_genomes_project 4 127801235 127802995 + Gm12946 antisense antisense MGP_129S1SvImJ_T0064964.1 MGP_129S1SvImJ_G0028122.1 mouse_genomes_project 4 30755260 30758338 - MGP_129S1SvImJ_P0064964 Pnrc1 protein_coding protein_coding MGP_129S1SvImJ_T0064965.1 MGP_129S1SvImJ_G0028122.1 mouse_genomes_project 4 30755841 30757413 - Pnrc1 protein_coding processed_transcript MGP_129S1SvImJ_T0064966.1 MGP_129S1SvImJ_G0028122.1 mouse_genomes_project 4 30755849 30805033 - Pnrc1 protein_coding processed_transcript MGP_129S1SvImJ_T0065659.1 MGP_129S1SvImJ_G0028271.1 mouse_genomes_project 4 46542055 46604219 + MGP_129S1SvImJ_P0065659 Stx17 protein_coding protein_coding MGP_129S1SvImJ_T0065660.1 MGP_129S1SvImJ_G0028271.1 mouse_genomes_project 4 46542063 46578204 + MGP_129S1SvImJ_P0065660 Stx17 protein_coding protein_coding MGP_129S1SvImJ_T0065661.1 MGP_129S1SvImJ_G0028271.1 mouse_genomes_project 4 46542066 46604814 + MGP_129S1SvImJ_P0065661 Stx17 protein_coding protein_coding MGP_129S1SvImJ_T0065662.1 MGP_129S1SvImJ_G0028271.1 mouse_genomes_project 4 46542075 46600539 + MGP_129S1SvImJ_P0065662 Stx17 protein_coding protein_coding MGP_129S1SvImJ_T0067625.1 MGP_129S1SvImJ_G0028735.1 mouse_genomes_project 4 124549058 124561689 - MGP_129S1SvImJ_P0067625 Ppie protein_coding protein_coding MGP_129S1SvImJ_T0067626.1 MGP_129S1SvImJ_G0028735.1 mouse_genomes_project 4 124549263 124558677 - Ppie protein_coding processed_transcript MGP_129S1SvImJ_T0067627.1 MGP_129S1SvImJ_G0028735.1 mouse_genomes_project 4 124549644 124560764 - Ppie protein_coding processed_transcript MGP_129S1SvImJ_T0067628.1 MGP_129S1SvImJ_G0028735.1 mouse_genomes_project 4 124558180 124561668 - Ppie protein_coding processed_transcript MGP_129S1SvImJ_T0068995.1 MGP_129S1SvImJ_G0029040.1 mouse_genomes_project 4 144164713 144235464 + MGP_129S1SvImJ_P0068995 Fbxo42 protein_coding protein_coding MGP_129S1SvImJ_T0068996.1 MGP_129S1SvImJ_G0029040.1 mouse_genomes_project 4 144164722 144225378 + Fbxo42 protein_coding processed_transcript MGP_129S1SvImJ_T0065076.1 MGP_129S1SvImJ_G0028147.1 mouse_genomes_project 4 38625335 38652526 - MGP_129S1SvImJ_P0065076 Smu1 protein_coding protein_coding MGP_129S1SvImJ_T0065077.1 MGP_129S1SvImJ_G0028147.1 mouse_genomes_project 4 38633819 38652486 - Smu1 protein_coding processed_transcript MGP_129S1SvImJ_T0065078.1 MGP_129S1SvImJ_G0028147.1 mouse_genomes_project 4 38649091 38652434 - Smu1 protein_coding processed_transcript MGP_129S1SvImJ_T0065079.1 MGP_129S1SvImJ_G0028147.1 mouse_genomes_project 4 38650415 38652001 - Smu1 protein_coding processed_transcript MGP_129S1SvImJ_T0098590.1 MGP_129S1SvImJ_G0036675.1 mouse_genomes_project 4 57809679 57809764 + Gm26400 rRNA rRNA MGP_129S1SvImJ_T0066866.1 MGP_129S1SvImJ_G0028559.1 mouse_genomes_project 4 109389006 109533462 - MGP_129S1SvImJ_P0066866 protein_coding protein_coding MGP_129S1SvImJ_T0066867.1 MGP_129S1SvImJ_G0028559.1 mouse_genomes_project 4 109389007 109533177 - MGP_129S1SvImJ_P0066867 protein_coding protein_coding MGP_129S1SvImJ_T0066868.1 MGP_129S1SvImJ_G0028559.1 mouse_genomes_project 4 109390797 109474126 - MGP_129S1SvImJ_P0066868 protein_coding protein_coding MGP_129S1SvImJ_T0068231.1 MGP_129S1SvImJ_G0028865.1 mouse_genomes_project 4 134355774 134388865 - MGP_129S1SvImJ_P0068231 Gmeb1 protein_coding protein_coding MGP_129S1SvImJ_T0068232.1 MGP_129S1SvImJ_G0028865.1 mouse_genomes_project 4 134359342 134397886 - MGP_129S1SvImJ_P0068232 Gmeb1 protein_coding protein_coding MGP_129S1SvImJ_T0068233.1 MGP_129S1SvImJ_G0028865.1 mouse_genomes_project 4 134361419 134388223 - MGP_129S1SvImJ_P0068233 Gmeb1 protein_coding protein_coding MGP_129S1SvImJ_T0068234.1 MGP_129S1SvImJ_G0028865.1 mouse_genomes_project 4 134362071 134397967 - MGP_129S1SvImJ_P0068234 Gmeb1 protein_coding protein_coding MGP_129S1SvImJ_T0068235.1 MGP_129S1SvImJ_G0028865.1 mouse_genomes_project 4 134367892 134371107 - Gmeb1 protein_coding retained_intron MGP_129S1SvImJ_T0068236.1 MGP_129S1SvImJ_G0028865.1 mouse_genomes_project 4 134372893 134382439 - Gmeb1 protein_coding retained_intron MGP_129S1SvImJ_T0068237.1 MGP_129S1SvImJ_G0028865.1 mouse_genomes_project 4 134388134 134390623 - Gmeb1 protein_coding processed_transcript MGP_129S1SvImJ_T0101167.1 MGP_129S1SvImJ_G0039234.1 mouse_genomes_project 4 134498211 134498416 - Snora73b snoRNA snoRNA MGP_129S1SvImJ_T0014699.1 MGP_129S1SvImJ_G0012788.1 mouse_genomes_project 4 100853348 100853805 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069113.1 MGP_129S1SvImJ_G0029070.1 mouse_genomes_project 4 146669802 146685453 - MGP_129S1SvImJ_P0069113 Oog4 protein_coding protein_coding MGP_129S1SvImJ_T0069114.1 MGP_129S1SvImJ_G0029070.1 mouse_genomes_project 4 146669803 146685433 - MGP_129S1SvImJ_P0069114 Oog4 protein_coding protein_coding MGP_129S1SvImJ_T0007903.1 MGP_129S1SvImJ_G0006464.1 mouse_genomes_project 4 92513172 92531791 + Gm12637 lincRNA lincRNA MGP_129S1SvImJ_T0004436.1 MGP_129S1SvImJ_G0003870.1 mouse_genomes_project 4 3207365 3223845 + Gm11802 antisense antisense MGP_129S1SvImJ_T0065740.1 MGP_129S1SvImJ_G0028296.1 mouse_genomes_project 4 51599523 51613343 + MGP_129S1SvImJ_P0065740 Nipsnap3a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065741.1 MGP_129S1SvImJ_G0028296.1 mouse_genomes_project 4 51599535 51613350 + MGP_129S1SvImJ_P0065741 Nipsnap3a protein_coding protein_coding MGP_129S1SvImJ_T0065742.1 MGP_129S1SvImJ_G0028296.1 mouse_genomes_project 4 51599669 51613658 + MGP_129S1SvImJ_P0065742 Nipsnap3a protein_coding protein_coding MGP_129S1SvImJ_T0065743.1 MGP_129S1SvImJ_G0028296.1 mouse_genomes_project 4 51612759 51613342 + Nipsnap3a protein_coding retained_intron MGP_129S1SvImJ_T0014556.1 MGP_129S1SvImJ_G0012645.1 mouse_genomes_project 4 47808368 47811546 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014631.1 MGP_129S1SvImJ_G0012720.1 mouse_genomes_project 4 75706792 75707739 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014798.1 MGP_129S1SvImJ_G0012887.1 mouse_genomes_project 4 131294529 131294865 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066139.1 MGP_129S1SvImJ_G0028400.1 mouse_genomes_project 4 82454218 82457598 - MGP_129S1SvImJ_P0066139 Cer1 protein_coding protein_coding MGP_129S1SvImJ_T0069932.1 MGP_129S1SvImJ_G0029247.1 mouse_genomes_project 4 160535044 160538841 - Agrn protein_coding retained_intron MGP_129S1SvImJ_T0069933.1 MGP_129S1SvImJ_G0029247.1 mouse_genomes_project 4 160535044 160555683 - MGP_129S1SvImJ_P0069933 Agrn protein_coding protein_coding MGP_129S1SvImJ_T0069934.1 MGP_129S1SvImJ_G0029247.1 mouse_genomes_project 4 160535044 160555683 - MGP_129S1SvImJ_P0069934 Agrn protein_coding protein_coding MGP_129S1SvImJ_T0069935.1 MGP_129S1SvImJ_G0029247.1 mouse_genomes_project 4 160535044 160555683 - MGP_129S1SvImJ_P0069935 Agrn protein_coding protein_coding MGP_129S1SvImJ_T0069936.1 MGP_129S1SvImJ_G0029247.1 mouse_genomes_project 4 160535048 160555889 - Agrn protein_coding retained_intron MGP_129S1SvImJ_T0069937.1 MGP_129S1SvImJ_G0029247.1 mouse_genomes_project 4 160535532 160567261 - MGP_129S1SvImJ_P0069937 Agrn protein_coding protein_coding MGP_129S1SvImJ_T0069938.1 MGP_129S1SvImJ_G0029247.1 mouse_genomes_project 4 160542054 160543486 - Agrn protein_coding processed_transcript MGP_129S1SvImJ_T0069243.1 MGP_129S1SvImJ_G0029124.1 mouse_genomes_project 4 152170644 152177021 + Mtor protein_coding retained_intron MGP_129S1SvImJ_T0069244.1 MGP_129S1SvImJ_G0029124.1 mouse_genomes_project 4 152170644 152295202 + MGP_129S1SvImJ_P0069244 Mtor protein_coding protein_coding MGP_129S1SvImJ_T0069245.1 MGP_129S1SvImJ_G0029124.1 mouse_genomes_project 4 152170658 152177025 + MGP_129S1SvImJ_P0069245 Mtor protein_coding protein_coding MGP_129S1SvImJ_T0069247.1 MGP_129S1SvImJ_G0029124.1 mouse_genomes_project 4 152275201 152282292 + Mtor protein_coding retained_intron MGP_129S1SvImJ_T0101130.1 MGP_129S1SvImJ_G0039197.1 mouse_genomes_project 4 73918138 73918270 + Gm26379 snoRNA snoRNA MGP_129S1SvImJ_T0101173.1 MGP_129S1SvImJ_G0039240.1 mouse_genomes_project 4 158382449 158382593 + Gm26036 snoRNA snoRNA MGP_129S1SvImJ_T0014729.1 MGP_129S1SvImJ_G0012818.1 mouse_genomes_project 4 110150119 110151278 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066036.1 MGP_129S1SvImJ_G0028378.1 mouse_genomes_project 4 64686725 64697974 + MGP_129S1SvImJ_P0066036 Trim32 protein_coding protein_coding MGP_129S1SvImJ_T0066037.1 MGP_129S1SvImJ_G0028378.1 mouse_genomes_project 4 64686725 64697974 + MGP_129S1SvImJ_P0066037 Trim32 protein_coding protein_coding MGP_129S1SvImJ_T0066038.1 MGP_129S1SvImJ_G0028378.1 mouse_genomes_project 4 64686988 64695352 + MGP_129S1SvImJ_P0066038 Trim32 protein_coding protein_coding MGP_129S1SvImJ_T0066039.1 MGP_129S1SvImJ_G0028378.1 mouse_genomes_project 4 64686988 64695492 + MGP_129S1SvImJ_P0066039 Trim32 protein_coding protein_coding MGP_129S1SvImJ_T0068370.1 MGP_129S1SvImJ_G0028894.1 mouse_genomes_project 4 135734044 135741886 + MGP_129S1SvImJ_P0068370 Fam46b protein_coding protein_coding MGP_129S1SvImJ_T0014582.1 MGP_129S1SvImJ_G0012671.1 mouse_genomes_project 4 54123804 54124156 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069022.1 MGP_129S1SvImJ_G0029048.1 mouse_genomes_project 4 144504277 144528178 + MGP_129S1SvImJ_P0069022 Zbtb17 protein_coding protein_coding MGP_129S1SvImJ_T0069023.1 MGP_129S1SvImJ_G0029048.1 mouse_genomes_project 4 144504307 144528863 + Zbtb17 protein_coding processed_transcript MGP_129S1SvImJ_T0069024.1 MGP_129S1SvImJ_G0029048.1 mouse_genomes_project 4 144504322 144528178 + Zbtb17 protein_coding processed_transcript MGP_129S1SvImJ_T0069025.1 MGP_129S1SvImJ_G0029048.1 mouse_genomes_project 4 144504329 144520328 + Zbtb17 protein_coding processed_transcript MGP_129S1SvImJ_T0069026.1 MGP_129S1SvImJ_G0029048.1 mouse_genomes_project 4 144524286 144525959 + Zbtb17 protein_coding processed_transcript MGP_129S1SvImJ_T0069027.1 MGP_129S1SvImJ_G0029048.1 mouse_genomes_project 4 144525729 144527021 + Zbtb17 protein_coding processed_transcript MGP_129S1SvImJ_T0069028.1 MGP_129S1SvImJ_G0029048.1 mouse_genomes_project 4 144526327 144528022 + Zbtb17 protein_coding processed_transcript MGP_129S1SvImJ_T0014646.1 MGP_129S1SvImJ_G0012735.1 mouse_genomes_project 4 82214566 82214833 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004501.1 MGP_129S1SvImJ_G0003919.1 mouse_genomes_project 4 98474004 98475454 + 0610025J13Rik antisense antisense MGP_129S1SvImJ_T0004502.1 MGP_129S1SvImJ_G0003919.1 mouse_genomes_project 4 98474054 98484333 + 0610025J13Rik antisense antisense MGP_129S1SvImJ_T0004503.1 MGP_129S1SvImJ_G0003919.1 mouse_genomes_project 4 98474054 98484333 + 0610025J13Rik antisense antisense MGP_129S1SvImJ_T0018070.1 MGP_129S1SvImJ_G0015538.1 mouse_genomes_project 4 30519693 30523946 - 4933421O10Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0067012.1 MGP_129S1SvImJ_G0028584.1 mouse_genomes_project 4 112976443 112990446 + MGP_129S1SvImJ_P0067012 Skint2 protein_coding protein_coding MGP_129S1SvImJ_T0067013.1 MGP_129S1SvImJ_G0028584.1 mouse_genomes_project 4 112976586 113009223 + MGP_129S1SvImJ_P0067013 Skint2 protein_coding protein_coding MGP_129S1SvImJ_T0067014.1 MGP_129S1SvImJ_G0028584.1 mouse_genomes_project 4 112976597 113004763 + Skint2 protein_coding processed_transcript MGP_129S1SvImJ_T0067015.1 MGP_129S1SvImJ_G0028584.1 mouse_genomes_project 4 112979431 113004763 + MGP_129S1SvImJ_P0067015 Skint2 protein_coding protein_coding MGP_129S1SvImJ_T0018144.1 MGP_129S1SvImJ_G0015584.1 mouse_genomes_project 4 158932641 158942185 - Gm13110 processed_transcript processed_transcript MGP_129S1SvImJ_T0010664.1 MGP_129S1SvImJ_G0008780.1 mouse_genomes_project 4 142848025 142848120 - Mir2139 miRNA miRNA MGP_129S1SvImJ_T0018105.1 MGP_129S1SvImJ_G0015563.1 mouse_genomes_project 4 104000282 104013311 - Gm12720 processed_transcript processed_transcript MGP_129S1SvImJ_T0069400.1 MGP_129S1SvImJ_G0029151.1 mouse_genomes_project 4 154078643 154103404 + MGP_129S1SvImJ_P0069400 Slc2a7 protein_coding protein_coding MGP_129S1SvImJ_T0069401.1 MGP_129S1SvImJ_G0029151.1 mouse_genomes_project 4 154089105 154089978 + Slc2a7 protein_coding retained_intron MGP_129S1SvImJ_T0064975.1 MGP_129S1SvImJ_G0028125.1 mouse_genomes_project 4 31581043 31603900 - MGP_129S1SvImJ_P0064975 Spaca1 protein_coding protein_coding MGP_129S1SvImJ_T0064976.1 MGP_129S1SvImJ_G0028125.1 mouse_genomes_project 4 31581045 31593564 - MGP_129S1SvImJ_P0064976 Spaca1 protein_coding protein_coding MGP_129S1SvImJ_T0064977.1 MGP_129S1SvImJ_G0028125.1 mouse_genomes_project 4 31584483 31604052 - MGP_129S1SvImJ_P0064977 Spaca1 protein_coding protein_coding MGP_129S1SvImJ_T0068925.1 MGP_129S1SvImJ_G0029026.1 mouse_genomes_project 4 143442865 143511712 - MGP_129S1SvImJ_P0068925 Arhgef10l protein_coding protein_coding MGP_129S1SvImJ_T0068926.1 MGP_129S1SvImJ_G0029026.1 mouse_genomes_project 4 143442865 143506988 - MGP_129S1SvImJ_P0068926 Arhgef10l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068927.1 MGP_129S1SvImJ_G0029026.1 mouse_genomes_project 4 143442865 143603838 - MGP_129S1SvImJ_P0068927 Arhgef10l protein_coding protein_coding MGP_129S1SvImJ_T0068928.1 MGP_129S1SvImJ_G0029026.1 mouse_genomes_project 4 143442865 143516014 - MGP_129S1SvImJ_P0068928 Arhgef10l protein_coding protein_coding MGP_129S1SvImJ_T0068929.1 MGP_129S1SvImJ_G0029026.1 mouse_genomes_project 4 143442865 143585402 - MGP_129S1SvImJ_P0068929 Arhgef10l protein_coding protein_coding MGP_129S1SvImJ_T0068930.1 MGP_129S1SvImJ_G0029026.1 mouse_genomes_project 4 143442865 143585402 - MGP_129S1SvImJ_P0068930 Arhgef10l protein_coding protein_coding MGP_129S1SvImJ_T0068931.1 MGP_129S1SvImJ_G0029026.1 mouse_genomes_project 4 143442865 143585408 - MGP_129S1SvImJ_P0068931 Arhgef10l protein_coding protein_coding MGP_129S1SvImJ_T0068932.1 MGP_129S1SvImJ_G0029026.1 mouse_genomes_project 4 143472658 143498252 - MGP_129S1SvImJ_P0068932 Arhgef10l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068933.1 MGP_129S1SvImJ_G0029026.1 mouse_genomes_project 4 143505319 143511696 - MGP_129S1SvImJ_P0068933 Arhgef10l protein_coding protein_coding MGP_129S1SvImJ_T0068934.1 MGP_129S1SvImJ_G0029026.1 mouse_genomes_project 4 143510758 143523707 - Arhgef10l protein_coding retained_intron MGP_129S1SvImJ_T0068935.1 MGP_129S1SvImJ_G0029026.1 mouse_genomes_project 4 143523598 143586012 - MGP_129S1SvImJ_P0068935 Arhgef10l protein_coding protein_coding MGP_129S1SvImJ_T0068936.1 MGP_129S1SvImJ_G0029026.1 mouse_genomes_project 4 143524835 143549777 - MGP_129S1SvImJ_P0068936 Arhgef10l protein_coding protein_coding MGP_129S1SvImJ_T0014676.1 MGP_129S1SvImJ_G0012765.1 mouse_genomes_project 4 93263503 93264393 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014748.1 MGP_129S1SvImJ_G0012837.1 mouse_genomes_project 4 117817615 117818493 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007953.1 MGP_129S1SvImJ_G0006504.1 mouse_genomes_project 4 125925481 125966740 - 1700057H15Rik lincRNA lincRNA MGP_129S1SvImJ_T0007954.1 MGP_129S1SvImJ_G0006504.1 mouse_genomes_project 4 125925481 125930572 - 1700057H15Rik lincRNA lincRNA MGP_129S1SvImJ_T0007955.1 MGP_129S1SvImJ_G0006504.1 mouse_genomes_project 4 125965346 126010665 - 1700057H15Rik lincRNA lincRNA MGP_129S1SvImJ_T0007956.1 MGP_129S1SvImJ_G0006504.1 mouse_genomes_project 4 125965679 125966730 - 1700057H15Rik lincRNA lincRNA MGP_129S1SvImJ_T0065209.1 MGP_129S1SvImJ_G0028187.1 mouse_genomes_project 4 40648335 40649001 + MGP_129S1SvImJ_P0065209 protein_coding protein_coding MGP_129S1SvImJ_T0069883.1 MGP_129S1SvImJ_G0029238.1 mouse_genomes_project 4 160264602 160282865 + MGP_129S1SvImJ_P0069883 Acap3 protein_coding protein_coding MGP_129S1SvImJ_T0069884.1 MGP_129S1SvImJ_G0029238.1 mouse_genomes_project 4 160264655 160282866 + MGP_129S1SvImJ_P0069884 Acap3 protein_coding protein_coding MGP_129S1SvImJ_T0069885.1 MGP_129S1SvImJ_G0029238.1 mouse_genomes_project 4 160264682 160275095 + Acap3 protein_coding processed_transcript MGP_129S1SvImJ_T0069886.1 MGP_129S1SvImJ_G0029238.1 mouse_genomes_project 4 160265052 160275237 + Acap3 protein_coding processed_transcript MGP_129S1SvImJ_T0069887.1 MGP_129S1SvImJ_G0029238.1 mouse_genomes_project 4 160265092 160282866 + Acap3 protein_coding processed_transcript MGP_129S1SvImJ_T0069888.1 MGP_129S1SvImJ_G0029238.1 mouse_genomes_project 4 160277210 160278313 + Acap3 protein_coding retained_intron MGP_129S1SvImJ_T0069889.1 MGP_129S1SvImJ_G0029238.1 mouse_genomes_project 4 160278201 160280720 + Acap3 protein_coding retained_intron MGP_129S1SvImJ_T0069890.1 MGP_129S1SvImJ_G0029238.1 mouse_genomes_project 4 160278863 160280951 + Acap3 protein_coding processed_transcript MGP_129S1SvImJ_T0069891.1 MGP_129S1SvImJ_G0029238.1 mouse_genomes_project 4 160280968 160281527 + Acap3 protein_coding processed_transcript MGP_129S1SvImJ_T0067560.1 MGP_129S1SvImJ_G0028714.1 mouse_genomes_project 4 122037205 122103794 - MGP_129S1SvImJ_P0067560 Nfyc protein_coding protein_coding MGP_129S1SvImJ_T0067561.1 MGP_129S1SvImJ_G0028714.1 mouse_genomes_project 4 122037205 122121379 - MGP_129S1SvImJ_P0067561 Nfyc protein_coding protein_coding MGP_129S1SvImJ_T0067562.1 MGP_129S1SvImJ_G0028714.1 mouse_genomes_project 4 122037205 122113780 - MGP_129S1SvImJ_P0067562 Nfyc protein_coding protein_coding MGP_129S1SvImJ_T0067563.1 MGP_129S1SvImJ_G0028714.1 mouse_genomes_project 4 122039840 122044062 - Nfyc protein_coding processed_transcript MGP_129S1SvImJ_T0067564.1 MGP_129S1SvImJ_G0028714.1 mouse_genomes_project 4 122040063 122076588 - MGP_129S1SvImJ_P0067564 Nfyc protein_coding protein_coding MGP_129S1SvImJ_T0067565.1 MGP_129S1SvImJ_G0028714.1 mouse_genomes_project 4 122040083 122047294 - Nfyc protein_coding processed_transcript MGP_129S1SvImJ_T0067566.1 MGP_129S1SvImJ_G0028714.1 mouse_genomes_project 4 122043551 122050080 - Nfyc protein_coding processed_transcript MGP_129S1SvImJ_T0067567.1 MGP_129S1SvImJ_G0028714.1 mouse_genomes_project 4 122047117 122113758 - MGP_129S1SvImJ_P0067567 Nfyc protein_coding protein_coding MGP_129S1SvImJ_T0067568.1 MGP_129S1SvImJ_G0028714.1 mouse_genomes_project 4 122050741 122113770 - MGP_129S1SvImJ_P0067568 Nfyc protein_coding protein_coding MGP_129S1SvImJ_T0067569.1 MGP_129S1SvImJ_G0028714.1 mouse_genomes_project 4 122065277 122113781 - MGP_129S1SvImJ_P0067569 Nfyc protein_coding protein_coding MGP_129S1SvImJ_T0004557.1 MGP_129S1SvImJ_G0003962.1 mouse_genomes_project 4 130779402 130783406 + Gm15904 antisense antisense MGP_129S1SvImJ_T0014740.1 MGP_129S1SvImJ_G0012829.1 mouse_genomes_project 4 116253805 116254130 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014448.1 MGP_129S1SvImJ_G0012537.1 mouse_genomes_project 4 14975959 14976969 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010662.1 MGP_129S1SvImJ_G0008778.1 mouse_genomes_project 4 142169580 142169637 + Gm24245 miRNA miRNA MGP_129S1SvImJ_T0066432.1 MGP_129S1SvImJ_G0028473.1 mouse_genomes_project 4 98899620 98906445 + MGP_129S1SvImJ_P0066432 L1td1 protein_coding protein_coding MGP_129S1SvImJ_T0066433.1 MGP_129S1SvImJ_G0028473.1 mouse_genomes_project 4 98899634 98911240 + MGP_129S1SvImJ_P0066433 L1td1 protein_coding protein_coding MGP_129S1SvImJ_T0066434.1 MGP_129S1SvImJ_G0028473.1 mouse_genomes_project 4 98899679 98906361 + MGP_129S1SvImJ_P0066434 L1td1 protein_coding protein_coding MGP_129S1SvImJ_T0066435.1 MGP_129S1SvImJ_G0028473.1 mouse_genomes_project 4 98906003 98910876 + MGP_129S1SvImJ_P0066435 L1td1 protein_coding protein_coding MGP_129S1SvImJ_T0069100.1 MGP_129S1SvImJ_G0029065.1 mouse_genomes_project 4 146300090 146408851 - MGP_129S1SvImJ_P0069100 Prdm2 protein_coding protein_coding MGP_129S1SvImJ_T0069101.1 MGP_129S1SvImJ_G0029065.1 mouse_genomes_project 4 146353203 146390658 - MGP_129S1SvImJ_P0069101 Prdm2 protein_coding protein_coding MGP_129S1SvImJ_T0069102.1 MGP_129S1SvImJ_G0029065.1 mouse_genomes_project 4 146353227 146408855 - MGP_129S1SvImJ_P0069102 Prdm2 protein_coding protein_coding MGP_129S1SvImJ_T0069103.1 MGP_129S1SvImJ_G0029065.1 mouse_genomes_project 4 146373152 146409135 - Prdm2 protein_coding processed_transcript MGP_129S1SvImJ_T0099856.1 MGP_129S1SvImJ_G0037923.1 mouse_genomes_project 4 109264621 109264728 - Gm25827 snRNA snRNA MGP_129S1SvImJ_T0014632.1 MGP_129S1SvImJ_G0012721.1 mouse_genomes_project 4 76032273 76034726 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067953.1 MGP_129S1SvImJ_G0028815.1 mouse_genomes_project 4 131008303 131056719 - MGP_129S1SvImJ_P0067953 S100pbp protein_coding protein_coding MGP_129S1SvImJ_T0067954.1 MGP_129S1SvImJ_G0028815.1 mouse_genomes_project 4 131008303 131056682 - MGP_129S1SvImJ_P0067954 S100pbp protein_coding protein_coding MGP_129S1SvImJ_T0067955.1 MGP_129S1SvImJ_G0028815.1 mouse_genomes_project 4 131008303 131056867 - MGP_129S1SvImJ_P0067955 S100pbp protein_coding protein_coding MGP_129S1SvImJ_T0067956.1 MGP_129S1SvImJ_G0028815.1 mouse_genomes_project 4 131009670 131049691 - MGP_129S1SvImJ_P0067956 S100pbp protein_coding protein_coding MGP_129S1SvImJ_T0067957.1 MGP_129S1SvImJ_G0028815.1 mouse_genomes_project 4 131010849 131056717 - S100pbp protein_coding processed_transcript MGP_129S1SvImJ_T0067958.1 MGP_129S1SvImJ_G0028815.1 mouse_genomes_project 4 131011128 131056717 - S100pbp protein_coding retained_intron MGP_129S1SvImJ_T0067959.1 MGP_129S1SvImJ_G0028815.1 mouse_genomes_project 4 131011128 131047583 - S100pbp protein_coding retained_intron MGP_129S1SvImJ_T0067960.1 MGP_129S1SvImJ_G0028815.1 mouse_genomes_project 4 131011334 131056652 - MGP_129S1SvImJ_P0067960 S100pbp protein_coding protein_coding MGP_129S1SvImJ_T0067961.1 MGP_129S1SvImJ_G0028815.1 mouse_genomes_project 4 131011334 131056749 - MGP_129S1SvImJ_P0067961 S100pbp protein_coding protein_coding MGP_129S1SvImJ_T0067962.1 MGP_129S1SvImJ_G0028815.1 mouse_genomes_project 4 131025484 131056757 - S100pbp protein_coding processed_transcript MGP_129S1SvImJ_T0067963.1 MGP_129S1SvImJ_G0028815.1 mouse_genomes_project 4 131032325 131045151 - S100pbp protein_coding processed_transcript MGP_129S1SvImJ_T0067964.1 MGP_129S1SvImJ_G0028815.1 mouse_genomes_project 4 131044010 131056766 - MGP_129S1SvImJ_P0067964 S100pbp protein_coding protein_coding MGP_129S1SvImJ_T0067965.1 MGP_129S1SvImJ_G0028815.1 mouse_genomes_project 4 131048902 131056810 - S100pbp protein_coding processed_transcript MGP_129S1SvImJ_T0067966.1 MGP_129S1SvImJ_G0028815.1 mouse_genomes_project 4 131048960 131056638 - S100pbp protein_coding processed_transcript MGP_129S1SvImJ_T0069550.1 MGP_129S1SvImJ_G0029179.1 mouse_genomes_project 4 156417904 156429484 - MGP_129S1SvImJ_P0069550 Rnf207 protein_coding protein_coding MGP_129S1SvImJ_T0069551.1 MGP_129S1SvImJ_G0029179.1 mouse_genomes_project 4 156418196 156419865 - Rnf207 protein_coding retained_intron MGP_129S1SvImJ_T0069552.1 MGP_129S1SvImJ_G0029179.1 mouse_genomes_project 4 156422220 156429334 - MGP_129S1SvImJ_P0069552 Rnf207 protein_coding protein_coding MGP_129S1SvImJ_T0069553.1 MGP_129S1SvImJ_G0029179.1 mouse_genomes_project 4 156422397 156424244 - Rnf207 protein_coding retained_intron MGP_129S1SvImJ_T0069554.1 MGP_129S1SvImJ_G0029179.1 mouse_genomes_project 4 156422556 156424189 - Rnf207 protein_coding retained_intron MGP_129S1SvImJ_T0069555.1 MGP_129S1SvImJ_G0029179.1 mouse_genomes_project 4 156423674 156424241 - Rnf207 protein_coding retained_intron MGP_129S1SvImJ_T0069556.1 MGP_129S1SvImJ_G0029179.1 mouse_genomes_project 4 156424233 156429357 - MGP_129S1SvImJ_P0069556 Rnf207 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069557.1 MGP_129S1SvImJ_G0029179.1 mouse_genomes_project 4 156424243 156426841 - Rnf207 protein_coding retained_intron MGP_129S1SvImJ_T0069558.1 MGP_129S1SvImJ_G0029179.1 mouse_genomes_project 4 156425385 156429869 - Rnf207 protein_coding retained_intron MGP_129S1SvImJ_T0069559.1 MGP_129S1SvImJ_G0029179.1 mouse_genomes_project 4 156425387 156429495 - Rnf207 protein_coding retained_intron MGP_129S1SvImJ_T0069560.1 MGP_129S1SvImJ_G0029179.1 mouse_genomes_project 4 156425732 156429501 - Rnf207 protein_coding retained_intron MGP_129S1SvImJ_T0069561.1 MGP_129S1SvImJ_G0029179.1 mouse_genomes_project 4 156426336 156427204 - Rnf207 protein_coding retained_intron MGP_129S1SvImJ_T0007972.1 MGP_129S1SvImJ_G0006515.1 mouse_genomes_project 4 130992592 130994451 + Gm15906 lincRNA lincRNA MGP_129S1SvImJ_T0007934.1 MGP_129S1SvImJ_G0006487.1 mouse_genomes_project 4 108456929 108463957 + Gm12907 lincRNA lincRNA MGP_129S1SvImJ_T0004515.1 MGP_129S1SvImJ_G0003931.1 mouse_genomes_project 4 108505623 108510539 - Lrp8os2 antisense antisense MGP_129S1SvImJ_T0004516.1 MGP_129S1SvImJ_G0003931.1 mouse_genomes_project 4 108505623 108522608 - Lrp8os2 antisense antisense MGP_129S1SvImJ_T0004517.1 MGP_129S1SvImJ_G0003931.1 mouse_genomes_project 4 108507578 108522560 - Lrp8os2 antisense antisense MGP_129S1SvImJ_T0004518.1 MGP_129S1SvImJ_G0003931.1 mouse_genomes_project 4 108510398 108522596 - Lrp8os2 antisense antisense MGP_129S1SvImJ_T0014760.1 MGP_129S1SvImJ_G0012849.1 mouse_genomes_project 4 120524505 120525913 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010672.1 MGP_129S1SvImJ_G0008788.1 mouse_genomes_project 4 153994594 153994696 + Mir34a miRNA miRNA MGP_129S1SvImJ_T0014643.1 MGP_129S1SvImJ_G0012732.1 mouse_genomes_project 4 79986344 79986828 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099820.1 MGP_129S1SvImJ_G0037887.1 mouse_genomes_project 4 37096517 37096681 - Gm25581 snRNA snRNA MGP_129S1SvImJ_T0014425.1 MGP_129S1SvImJ_G0012514.1 mouse_genomes_project 4 8835294 8835822 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004448.1 MGP_129S1SvImJ_G0003879.1 mouse_genomes_project 4 17352644 17356756 + Gm11872 antisense antisense MGP_129S1SvImJ_T0067382.1 MGP_129S1SvImJ_G0028665.1 mouse_genomes_project 4 119417602 119466378 - MGP_129S1SvImJ_P0067382 Szt2 protein_coding protein_coding MGP_129S1SvImJ_T0067383.1 MGP_129S1SvImJ_G0028665.1 mouse_genomes_project 4 119417606 119428882 - MGP_129S1SvImJ_P0067383 Szt2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067384.1 MGP_129S1SvImJ_G0028665.1 mouse_genomes_project 4 119418268 119419923 - Szt2 protein_coding processed_transcript MGP_129S1SvImJ_T0067385.1 MGP_129S1SvImJ_G0028665.1 mouse_genomes_project 4 119423574 119424461 - Szt2 protein_coding retained_intron MGP_129S1SvImJ_T0067386.1 MGP_129S1SvImJ_G0028665.1 mouse_genomes_project 4 119427280 119428433 - Szt2 protein_coding retained_intron MGP_129S1SvImJ_T0067387.1 MGP_129S1SvImJ_G0028665.1 mouse_genomes_project 4 119444144 119444948 - Szt2 protein_coding processed_transcript MGP_129S1SvImJ_T0065019.1 MGP_129S1SvImJ_G0028134.1 mouse_genomes_project 4 32496693 32511143 + MGP_129S1SvImJ_P0065019 Cga protein_coding protein_coding MGP_129S1SvImJ_T0065020.1 MGP_129S1SvImJ_G0028134.1 mouse_genomes_project 4 32496702 32510905 + MGP_129S1SvImJ_P0065020 Cga protein_coding protein_coding MGP_129S1SvImJ_T0065021.1 MGP_129S1SvImJ_G0028134.1 mouse_genomes_project 4 32496702 32510951 + MGP_129S1SvImJ_P0065021 Cga protein_coding protein_coding MGP_129S1SvImJ_T0014551.1 MGP_129S1SvImJ_G0012640.1 mouse_genomes_project 4 45835252 45836571 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014745.1 MGP_129S1SvImJ_G0012834.1 mouse_genomes_project 4 117776665 117777300 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068299.1 MGP_129S1SvImJ_G0028877.1 mouse_genomes_project 4 134908351 134916180 - MGP_129S1SvImJ_P0068299 Xkr8 protein_coding protein_coding MGP_129S1SvImJ_T0068300.1 MGP_129S1SvImJ_G0028877.1 mouse_genomes_project 4 134912131 134916162 - Xkr8 protein_coding processed_transcript MGP_129S1SvImJ_T0068301.1 MGP_129S1SvImJ_G0028877.1 mouse_genomes_project 4 134914537 134916117 - Xkr8 protein_coding processed_transcript MGP_129S1SvImJ_T0066033.1 MGP_129S1SvImJ_G0028376.1 mouse_genomes_project 4 64190238 64431356 + MGP_129S1SvImJ_P0066033 Pappa protein_coding protein_coding MGP_129S1SvImJ_T0069535.1 MGP_129S1SvImJ_G0029175.1 mouse_genomes_project 4 156280424 156379392 + MGP_129S1SvImJ_P0069535 Acot7 protein_coding protein_coding MGP_129S1SvImJ_T0069536.1 MGP_129S1SvImJ_G0029175.1 mouse_genomes_project 4 156288055 156324173 + Acot7 protein_coding processed_transcript MGP_129S1SvImJ_T0069537.1 MGP_129S1SvImJ_G0029175.1 mouse_genomes_project 4 156288424 156379395 + MGP_129S1SvImJ_P0069537 Acot7 protein_coding protein_coding MGP_129S1SvImJ_T0069538.1 MGP_129S1SvImJ_G0029175.1 mouse_genomes_project 4 156288496 156379387 + MGP_129S1SvImJ_P0069538 Acot7 protein_coding protein_coding MGP_129S1SvImJ_T0069539.1 MGP_129S1SvImJ_G0029175.1 mouse_genomes_project 4 156306645 156379387 + MGP_129S1SvImJ_P0069539 Acot7 protein_coding protein_coding MGP_129S1SvImJ_T0069540.1 MGP_129S1SvImJ_G0029175.1 mouse_genomes_project 4 156306703 156324253 + Acot7 protein_coding processed_transcript MGP_129S1SvImJ_T0014484.1 MGP_129S1SvImJ_G0012573.1 mouse_genomes_project 4 24762641 24763078 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004509.1 MGP_129S1SvImJ_G0003925.1 mouse_genomes_project 4 103403457 103413785 - BB031773 antisense antisense MGP_129S1SvImJ_T0069417.1 MGP_129S1SvImJ_G0029154.1 mouse_genomes_project 4 154235895 154604843 + MGP_129S1SvImJ_P0069417 Rere protein_coding protein_coding MGP_129S1SvImJ_T0069418.1 MGP_129S1SvImJ_G0029154.1 mouse_genomes_project 4 154236060 154236715 + Rere protein_coding processed_transcript MGP_129S1SvImJ_T0069419.1 MGP_129S1SvImJ_G0029154.1 mouse_genomes_project 4 154362402 154604846 + MGP_129S1SvImJ_P0069419 Rere protein_coding unknown_likely_coding MGP_129S1SvImJ_T0069420.1 MGP_129S1SvImJ_G0029154.1 mouse_genomes_project 4 154371061 154437929 + MGP_129S1SvImJ_P0069420 Rere protein_coding protein_coding MGP_129S1SvImJ_T0069421.1 MGP_129S1SvImJ_G0029154.1 mouse_genomes_project 4 154455881 154604839 + MGP_129S1SvImJ_P0069421 Rere protein_coding protein_coding MGP_129S1SvImJ_T0069422.1 MGP_129S1SvImJ_G0029154.1 mouse_genomes_project 4 154541907 154542815 + Rere protein_coding processed_transcript MGP_129S1SvImJ_T0069423.1 MGP_129S1SvImJ_G0029154.1 mouse_genomes_project 4 154541976 154594944 + Rere protein_coding processed_transcript MGP_129S1SvImJ_T0069424.1 MGP_129S1SvImJ_G0029154.1 mouse_genomes_project 4 154600142 154602705 + MGP_129S1SvImJ_P0069424 Rere protein_coding protein_coding MGP_129S1SvImJ_T0068167.1 MGP_129S1SvImJ_G0028854.1 mouse_genomes_project 4 132836881 132874429 + MGP_129S1SvImJ_P0068167 Sdc3 protein_coding protein_coding MGP_129S1SvImJ_T0068168.1 MGP_129S1SvImJ_G0028854.1 mouse_genomes_project 4 132837048 132865383 + Sdc3 protein_coding retained_intron MGP_129S1SvImJ_T0068169.1 MGP_129S1SvImJ_G0028854.1 mouse_genomes_project 4 132860211 132867169 + MGP_129S1SvImJ_P0068169 Sdc3 protein_coding protein_coding MGP_129S1SvImJ_T0068170.1 MGP_129S1SvImJ_G0028854.1 mouse_genomes_project 4 132862413 132867169 + MGP_129S1SvImJ_P0068170 Sdc3 protein_coding protein_coding MGP_129S1SvImJ_T0068171.1 MGP_129S1SvImJ_G0028854.1 mouse_genomes_project 4 132864954 132870360 + Sdc3 protein_coding retained_intron MGP_129S1SvImJ_T0014441.1 MGP_129S1SvImJ_G0012530.1 mouse_genomes_project 4 13288943 13290004 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069545.1 MGP_129S1SvImJ_G0029177.1 mouse_genomes_project 4 156393603 156395685 - MGP_129S1SvImJ_P0069545 Hes3 protein_coding protein_coding MGP_129S1SvImJ_T0008009.1 MGP_129S1SvImJ_G0006536.1 mouse_genomes_project 4 138897176 138898821 - Gm27022 lincRNA lincRNA MGP_129S1SvImJ_T0101125.1 MGP_129S1SvImJ_G0039192.1 mouse_genomes_project 4 65645450 65645583 + Gm25480 snoRNA snoRNA MGP_129S1SvImJ_T0101166.1 MGP_129S1SvImJ_G0039233.1 mouse_genomes_project 4 134450527 134450601 + Snord99 snoRNA snoRNA MGP_129S1SvImJ_T0068622.1 MGP_129S1SvImJ_G0028951.1 mouse_genomes_project 4 138358213 138361139 - MGP_129S1SvImJ_P0068622 Pnrc2 protein_coding protein_coding MGP_129S1SvImJ_T0068623.1 MGP_129S1SvImJ_G0028951.1 mouse_genomes_project 4 138359612 138360859 - MGP_129S1SvImJ_P0068623 Pnrc2 protein_coding protein_coding MGP_129S1SvImJ_T0068624.1 MGP_129S1SvImJ_G0028951.1 mouse_genomes_project 4 138359739 138360350 - MGP_129S1SvImJ_P0068624 Pnrc2 protein_coding protein_coding MGP_129S1SvImJ_T0067990.1 MGP_129S1SvImJ_G0028821.1 mouse_genomes_project 4 131261940 131292802 - MGP_129S1SvImJ_P0067990 Zbtb8a protein_coding protein_coding MGP_129S1SvImJ_T0067771.1 MGP_129S1SvImJ_G0028774.1 mouse_genomes_project 4 127819342 127861187 - MGP_129S1SvImJ_P0067771 Thrap3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0067772.1 MGP_129S1SvImJ_G0028774.1 mouse_genomes_project 4 127820142 127861306 - MGP_129S1SvImJ_P0067772 Thrap3 protein_coding protein_coding MGP_129S1SvImJ_T0067773.1 MGP_129S1SvImJ_G0028774.1 mouse_genomes_project 4 127820805 127831662 - MGP_129S1SvImJ_P0067773 Thrap3 protein_coding protein_coding MGP_129S1SvImJ_T0067774.1 MGP_129S1SvImJ_G0028774.1 mouse_genomes_project 4 127820819 127822741 - Thrap3 protein_coding processed_transcript MGP_129S1SvImJ_T0067775.1 MGP_129S1SvImJ_G0028774.1 mouse_genomes_project 4 127822312 127829721 - MGP_129S1SvImJ_P0067775 Thrap3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067776.1 MGP_129S1SvImJ_G0028774.1 mouse_genomes_project 4 127831580 127834741 - MGP_129S1SvImJ_P0067776 Thrap3 protein_coding protein_coding MGP_129S1SvImJ_T0067777.1 MGP_129S1SvImJ_G0028774.1 mouse_genomes_project 4 127836830 127852926 - MGP_129S1SvImJ_P0067777 Thrap3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067778.1 MGP_129S1SvImJ_G0028774.1 mouse_genomes_project 4 127837006 127859687 - MGP_129S1SvImJ_P0067778 Thrap3 protein_coding protein_coding MGP_129S1SvImJ_T0067779.1 MGP_129S1SvImJ_G0028774.1 mouse_genomes_project 4 127837015 127861135 - MGP_129S1SvImJ_P0067779 Thrap3 protein_coding protein_coding MGP_129S1SvImJ_T0067780.1 MGP_129S1SvImJ_G0028774.1 mouse_genomes_project 4 127843134 127861169 - Thrap3 protein_coding retained_intron MGP_129S1SvImJ_T0067781.1 MGP_129S1SvImJ_G0028774.1 mouse_genomes_project 4 127843315 127861205 - Thrap3 protein_coding retained_intron MGP_129S1SvImJ_T0067782.1 MGP_129S1SvImJ_G0028774.1 mouse_genomes_project 4 127843553 127861193 - MGP_129S1SvImJ_P0067782 Thrap3 protein_coding protein_coding MGP_129S1SvImJ_T0067783.1 MGP_129S1SvImJ_G0028774.1 mouse_genomes_project 4 127843559 127860922 - MGP_129S1SvImJ_P0067783 Thrap3 protein_coding protein_coding MGP_129S1SvImJ_T0067784.1 MGP_129S1SvImJ_G0028774.1 mouse_genomes_project 4 127843565 127860936 - MGP_129S1SvImJ_P0067784 Thrap3 protein_coding protein_coding MGP_129S1SvImJ_T0067785.1 MGP_129S1SvImJ_G0028774.1 mouse_genomes_project 4 127852453 127861216 - Thrap3 protein_coding processed_transcript MGP_129S1SvImJ_T0007911.1 MGP_129S1SvImJ_G0006471.1 mouse_genomes_project 4 99829065 99832577 + Gm12690 lincRNA lincRNA MGP_129S1SvImJ_T0069053.1 MGP_129S1SvImJ_G0029052.1 mouse_genomes_project 4 144702028 144706882 - MGP_129S1SvImJ_P0069053 Slc25a34 protein_coding protein_coding MGP_129S1SvImJ_T0099816.1 MGP_129S1SvImJ_G0037883.1 mouse_genomes_project 4 28612592 28612696 - Gm25705 snRNA snRNA MGP_129S1SvImJ_T0066579.1 MGP_129S1SvImJ_G0028505.1 mouse_genomes_project 4 103526077 103527592 + Mier1 protein_coding processed_transcript MGP_129S1SvImJ_T0066580.1 MGP_129S1SvImJ_G0028505.1 mouse_genomes_project 4 103526082 103579077 + MGP_129S1SvImJ_P0066580 Mier1 protein_coding protein_coding MGP_129S1SvImJ_T0066581.1 MGP_129S1SvImJ_G0028505.1 mouse_genomes_project 4 103526118 103542710 + Mier1 protein_coding processed_transcript MGP_129S1SvImJ_T0066582.1 MGP_129S1SvImJ_G0028505.1 mouse_genomes_project 4 103526152 103556519 + Mier1 protein_coding processed_transcript MGP_129S1SvImJ_T0066583.1 MGP_129S1SvImJ_G0028505.1 mouse_genomes_project 4 103526449 103529990 + MGP_129S1SvImJ_P0066583 Mier1 protein_coding protein_coding MGP_129S1SvImJ_T0066584.1 MGP_129S1SvImJ_G0028505.1 mouse_genomes_project 4 103526643 103530354 + Mier1 protein_coding processed_transcript MGP_129S1SvImJ_T0066585.1 MGP_129S1SvImJ_G0028505.1 mouse_genomes_project 4 103526959 103538986 + MGP_129S1SvImJ_P0066585 Mier1 protein_coding protein_coding MGP_129S1SvImJ_T0066586.1 MGP_129S1SvImJ_G0028505.1 mouse_genomes_project 4 103527247 103579072 + MGP_129S1SvImJ_P0066586 Mier1 protein_coding protein_coding MGP_129S1SvImJ_T0066587.1 MGP_129S1SvImJ_G0028505.1 mouse_genomes_project 4 103527325 103579072 + MGP_129S1SvImJ_P0066587 Mier1 protein_coding protein_coding MGP_129S1SvImJ_T0066588.1 MGP_129S1SvImJ_G0028505.1 mouse_genomes_project 4 103528982 103530278 + Mier1 protein_coding processed_transcript MGP_129S1SvImJ_T0066589.1 MGP_129S1SvImJ_G0028505.1 mouse_genomes_project 4 103530973 103579075 + MGP_129S1SvImJ_P0066589 Mier1 protein_coding protein_coding MGP_129S1SvImJ_T0066590.1 MGP_129S1SvImJ_G0028505.1 mouse_genomes_project 4 103531077 103555899 + Mier1 protein_coding retained_intron MGP_129S1SvImJ_T0066591.1 MGP_129S1SvImJ_G0028505.1 mouse_genomes_project 4 103531097 103557749 + Mier1 protein_coding retained_intron MGP_129S1SvImJ_T0066592.1 MGP_129S1SvImJ_G0028505.1 mouse_genomes_project 4 103556382 103576080 + MGP_129S1SvImJ_P0066592 Mier1 protein_coding protein_coding MGP_129S1SvImJ_T0066593.1 MGP_129S1SvImJ_G0028505.1 mouse_genomes_project 4 103571911 103576149 + Mier1 protein_coding processed_transcript MGP_129S1SvImJ_T0014405.1 MGP_129S1SvImJ_G0012494.1 mouse_genomes_project 4 2599175 2599929 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014755.1 MGP_129S1SvImJ_G0012844.1 mouse_genomes_project 4 118827286 118827762 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011601.1 MGP_129S1SvImJ_G0009717.1 mouse_genomes_project 4 117860095 117860362 + Gm25435 misc_RNA misc_RNA MGP_129S1SvImJ_T0069346.1 MGP_129S1SvImJ_G0029140.1 mouse_genomes_project 4 153312200 153333222 - MGP_129S1SvImJ_P0069346 Nmnat1 protein_coding protein_coding MGP_129S1SvImJ_T0069347.1 MGP_129S1SvImJ_G0029140.1 mouse_genomes_project 4 153313140 153333218 - MGP_129S1SvImJ_P0069347 Nmnat1 protein_coding protein_coding MGP_129S1SvImJ_T0069348.1 MGP_129S1SvImJ_G0029140.1 mouse_genomes_project 4 153313180 153333192 - MGP_129S1SvImJ_P0069348 Nmnat1 protein_coding protein_coding MGP_129S1SvImJ_T0069349.1 MGP_129S1SvImJ_G0029140.1 mouse_genomes_project 4 153321196 153333183 - MGP_129S1SvImJ_P0069349 Nmnat1 protein_coding protein_coding MGP_129S1SvImJ_T0067676.1 MGP_129S1SvImJ_G0028746.1 mouse_genomes_project 4 125403063 125423523 + MGP_129S1SvImJ_P0067676 Rragc protein_coding protein_coding MGP_129S1SvImJ_T0067677.1 MGP_129S1SvImJ_G0028746.1 mouse_genomes_project 4 125403091 125423519 + MGP_129S1SvImJ_P0067677 Rragc protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067679.1 MGP_129S1SvImJ_G0028746.1 mouse_genomes_project 4 125404700 125406605 + Rragc protein_coding processed_transcript MGP_129S1SvImJ_T0067680.1 MGP_129S1SvImJ_G0028746.1 mouse_genomes_project 4 125406520 125415570 + Rragc protein_coding retained_intron MGP_129S1SvImJ_T0067681.1 MGP_129S1SvImJ_G0028746.1 mouse_genomes_project 4 125406895 125422072 + Rragc protein_coding processed_transcript MGP_129S1SvImJ_T0066291.1 MGP_129S1SvImJ_G0028433.1 mouse_genomes_project 4 88589152 88590190 + MGP_129S1SvImJ_P0066291 Gm26566 protein_coding protein_coding MGP_129S1SvImJ_T0007862.1 MGP_129S1SvImJ_G0006429.1 mouse_genomes_project 4 54162318 54181617 - Gm12510 lincRNA lincRNA MGP_129S1SvImJ_T0065736.1 MGP_129S1SvImJ_G0028294.1 mouse_genomes_project 4 51515554 51516516 - MGP_129S1SvImJ_P0065736 Olfr272 protein_coding protein_coding MGP_129S1SvImJ_T0065737.1 MGP_129S1SvImJ_G0028294.1 mouse_genomes_project 4 51515554 51523894 - MGP_129S1SvImJ_P0065737 Olfr272 protein_coding protein_coding MGP_129S1SvImJ_T0069343.1 MGP_129S1SvImJ_G0029139.1 mouse_genomes_project 4 153291693 153296976 - MGP_129S1SvImJ_P0069343 Rbp7 protein_coding protein_coding MGP_129S1SvImJ_T0069344.1 MGP_129S1SvImJ_G0029139.1 mouse_genomes_project 4 153291693 153295421 - MGP_129S1SvImJ_P0069344 Rbp7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069345.1 MGP_129S1SvImJ_G0029139.1 mouse_genomes_project 4 153291709 153296968 - Rbp7 protein_coding processed_transcript MGP_129S1SvImJ_T0069142.1 MGP_129S1SvImJ_G0029094.1 mouse_genomes_project 4 147886000 147896786 + MGP_129S1SvImJ_P0069142 9430007A20Rik protein_coding protein_coding MGP_129S1SvImJ_T0069431.1 MGP_129S1SvImJ_G0029157.1 mouse_genomes_project 4 154923650 154942232 - MGP_129S1SvImJ_P0069431 Park7 protein_coding protein_coding MGP_129S1SvImJ_T0069432.1 MGP_129S1SvImJ_G0029157.1 mouse_genomes_project 4 154923650 154937708 - MGP_129S1SvImJ_P0069432 Park7 protein_coding protein_coding MGP_129S1SvImJ_T0069433.1 MGP_129S1SvImJ_G0029157.1 mouse_genomes_project 4 154923662 154937408 - MGP_129S1SvImJ_P0069433 Park7 protein_coding protein_coding MGP_129S1SvImJ_T0069434.1 MGP_129S1SvImJ_G0029157.1 mouse_genomes_project 4 154923753 154936122 - MGP_129S1SvImJ_P0069434 Park7 protein_coding protein_coding MGP_129S1SvImJ_T0069435.1 MGP_129S1SvImJ_G0029157.1 mouse_genomes_project 4 154923756 154937433 - MGP_129S1SvImJ_P0069435 Park7 protein_coding protein_coding MGP_129S1SvImJ_T0069436.1 MGP_129S1SvImJ_G0029157.1 mouse_genomes_project 4 154923901 154928383 - Park7 protein_coding processed_transcript MGP_129S1SvImJ_T0069437.1 MGP_129S1SvImJ_G0029157.1 mouse_genomes_project 4 154927553 154937265 - MGP_129S1SvImJ_P0069437 Park7 protein_coding protein_coding MGP_129S1SvImJ_T0069438.1 MGP_129S1SvImJ_G0029157.1 mouse_genomes_project 4 154930110 154937610 - Park7 protein_coding retained_intron MGP_129S1SvImJ_T0069439.1 MGP_129S1SvImJ_G0029157.1 mouse_genomes_project 4 154932831 154937650 - MGP_129S1SvImJ_P0069439 Park7 protein_coding protein_coding MGP_129S1SvImJ_T0069440.1 MGP_129S1SvImJ_G0029157.1 mouse_genomes_project 4 154932955 154942001 - MGP_129S1SvImJ_P0069440 Park7 protein_coding protein_coding MGP_129S1SvImJ_T0069866.1 MGP_129S1SvImJ_G0029235.1 mouse_genomes_project 4 160235181 160239900 - MGP_129S1SvImJ_P0069866 Cptp protein_coding protein_coding MGP_129S1SvImJ_T0069867.1 MGP_129S1SvImJ_G0029235.1 mouse_genomes_project 4 160235756 160239822 - Cptp protein_coding processed_transcript MGP_129S1SvImJ_T0069868.1 MGP_129S1SvImJ_G0029235.1 mouse_genomes_project 4 160236823 160239278 - MGP_129S1SvImJ_P0069868 Cptp protein_coding protein_coding MGP_129S1SvImJ_T0004604.1 MGP_129S1SvImJ_G0003998.1 mouse_genomes_project 4 152322136 152323419 - Gm13209 antisense antisense MGP_129S1SvImJ_T0068208.1 MGP_129S1SvImJ_G0028861.1 mouse_genomes_project 4 134038546 134053341 - MGP_129S1SvImJ_P0068208 Epb41 protein_coding protein_coding MGP_129S1SvImJ_T0068209.1 MGP_129S1SvImJ_G0028861.1 mouse_genomes_project 4 134038549 134053378 - Epb41 protein_coding processed_transcript MGP_129S1SvImJ_T0068210.1 MGP_129S1SvImJ_G0028861.1 mouse_genomes_project 4 134038549 134196303 - Epb41 protein_coding processed_transcript MGP_129S1SvImJ_T0068211.1 MGP_129S1SvImJ_G0028861.1 mouse_genomes_project 4 134038549 134083864 - MGP_129S1SvImJ_P0068211 Epb41 protein_coding protein_coding MGP_129S1SvImJ_T0068212.1 MGP_129S1SvImJ_G0028861.1 mouse_genomes_project 4 134038549 134120884 - MGP_129S1SvImJ_P0068212 Epb41 protein_coding protein_coding MGP_129S1SvImJ_T0068213.1 MGP_129S1SvImJ_G0028861.1 mouse_genomes_project 4 134038549 134124521 - MGP_129S1SvImJ_P0068213 Epb41 protein_coding protein_coding MGP_129S1SvImJ_T0068214.1 MGP_129S1SvImJ_G0028861.1 mouse_genomes_project 4 134038549 134196274 - MGP_129S1SvImJ_P0068214 Epb41 protein_coding protein_coding MGP_129S1SvImJ_T0068215.1 MGP_129S1SvImJ_G0028861.1 mouse_genomes_project 4 134038549 134083895 - MGP_129S1SvImJ_P0068215 Epb41 protein_coding protein_coding MGP_129S1SvImJ_T0068216.1 MGP_129S1SvImJ_G0028861.1 mouse_genomes_project 4 134038549 134196274 - MGP_129S1SvImJ_P0068216 Epb41 protein_coding protein_coding MGP_129S1SvImJ_T0068217.1 MGP_129S1SvImJ_G0028861.1 mouse_genomes_project 4 134038549 134124522 - MGP_129S1SvImJ_P0068217 Epb41 protein_coding protein_coding MGP_129S1SvImJ_T0068218.1 MGP_129S1SvImJ_G0028861.1 mouse_genomes_project 4 134038564 134168974 - MGP_129S1SvImJ_P0068218 Epb41 protein_coding protein_coding MGP_129S1SvImJ_T0068219.1 MGP_129S1SvImJ_G0028861.1 mouse_genomes_project 4 134038564 134193105 - MGP_129S1SvImJ_P0068219 Epb41 protein_coding protein_coding MGP_129S1SvImJ_T0068220.1 MGP_129S1SvImJ_G0028861.1 mouse_genomes_project 4 134038564 134168974 - MGP_129S1SvImJ_P0068220 Epb41 protein_coding protein_coding MGP_129S1SvImJ_T0068221.1 MGP_129S1SvImJ_G0028861.1 mouse_genomes_project 4 134039264 134193105 - Epb41 protein_coding processed_transcript MGP_129S1SvImJ_T0068222.1 MGP_129S1SvImJ_G0028861.1 mouse_genomes_project 4 134041649 134124515 - MGP_129S1SvImJ_P0068222 Epb41 protein_coding protein_coding MGP_129S1SvImJ_T0068223.1 MGP_129S1SvImJ_G0028861.1 mouse_genomes_project 4 134071518 134127718 - MGP_129S1SvImJ_P0068223 Epb41 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0068224.1 MGP_129S1SvImJ_G0028861.1 mouse_genomes_project 4 134073638 134168987 - MGP_129S1SvImJ_P0068224 Epb41 protein_coding protein_coding MGP_129S1SvImJ_T0068225.1 MGP_129S1SvImJ_G0028861.1 mouse_genomes_project 4 134106623 134117380 - Epb41 protein_coding processed_transcript MGP_129S1SvImJ_T0068226.1 MGP_129S1SvImJ_G0028861.1 mouse_genomes_project 4 134120865 134196246 - Epb41 protein_coding processed_transcript MGP_129S1SvImJ_T0099844.1 MGP_129S1SvImJ_G0037911.1 mouse_genomes_project 4 93629017 93629124 + Gm24796 snRNA snRNA MGP_129S1SvImJ_T0014549.1 MGP_129S1SvImJ_G0012638.1 mouse_genomes_project 4 45437451 45437694 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066419.1 MGP_129S1SvImJ_G0028472.1 mouse_genomes_project 4 98557060 98567896 + Inadl protein_coding processed_transcript MGP_129S1SvImJ_T0066420.1 MGP_129S1SvImJ_G0028472.1 mouse_genomes_project 4 98557066 98891361 + MGP_129S1SvImJ_P0066420 Inadl protein_coding protein_coding MGP_129S1SvImJ_T0066421.1 MGP_129S1SvImJ_G0028472.1 mouse_genomes_project 4 98557130 98723452 + MGP_129S1SvImJ_P0066421 Inadl protein_coding protein_coding MGP_129S1SvImJ_T0066422.1 MGP_129S1SvImJ_G0028472.1 mouse_genomes_project 4 98557130 98840607 + MGP_129S1SvImJ_P0066422 Inadl protein_coding protein_coding MGP_129S1SvImJ_T0066423.1 MGP_129S1SvImJ_G0028472.1 mouse_genomes_project 4 98557167 98621797 + MGP_129S1SvImJ_P0066423 Inadl protein_coding protein_coding MGP_129S1SvImJ_T0066424.1 MGP_129S1SvImJ_G0028472.1 mouse_genomes_project 4 98578817 98594626 + Inadl protein_coding processed_transcript MGP_129S1SvImJ_T0066425.1 MGP_129S1SvImJ_G0028472.1 mouse_genomes_project 4 98599707 98606067 + Inadl protein_coding processed_transcript MGP_129S1SvImJ_T0066426.1 MGP_129S1SvImJ_G0028472.1 mouse_genomes_project 4 98606005 98672444 + MGP_129S1SvImJ_P0066426 Inadl protein_coding protein_coding MGP_129S1SvImJ_T0066427.1 MGP_129S1SvImJ_G0028472.1 mouse_genomes_project 4 98616175 98890116 + MGP_129S1SvImJ_P0066427 Inadl protein_coding protein_coding MGP_129S1SvImJ_T0066428.1 MGP_129S1SvImJ_G0028472.1 mouse_genomes_project 4 98669868 98682980 + Inadl protein_coding processed_transcript MGP_129S1SvImJ_T0066429.1 MGP_129S1SvImJ_G0028472.1 mouse_genomes_project 4 98693653 98708006 + MGP_129S1SvImJ_P0066429 Inadl protein_coding protein_coding MGP_129S1SvImJ_T0066430.1 MGP_129S1SvImJ_G0028472.1 mouse_genomes_project 4 98715532 98891361 + MGP_129S1SvImJ_P0066430 Inadl protein_coding protein_coding MGP_129S1SvImJ_T0066431.1 MGP_129S1SvImJ_G0028472.1 mouse_genomes_project 4 98715771 98860000 + MGP_129S1SvImJ_P0066431 Inadl protein_coding protein_coding MGP_129S1SvImJ_T0007849.1 MGP_129S1SvImJ_G0006420.1 mouse_genomes_project 4 45366298 45368764 - Gm568 lincRNA lincRNA MGP_129S1SvImJ_T0065877.1 MGP_129S1SvImJ_G0028331.1 mouse_genomes_project 4 57878365 57914065 + MGP_129S1SvImJ_P0065877 Gm20503 protein_coding protein_coding MGP_129S1SvImJ_T0066177.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 83890238 84307326 - MGP_129S1SvImJ_P0066177 Bnc2 protein_coding protein_coding MGP_129S1SvImJ_T0066178.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 83890372 84307359 - MGP_129S1SvImJ_P0066178 Bnc2 protein_coding protein_coding MGP_129S1SvImJ_T0066179.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 83890495 84307567 - MGP_129S1SvImJ_P0066179 Bnc2 protein_coding protein_coding MGP_129S1SvImJ_T0066180.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 83890523 83906894 - MGP_129S1SvImJ_P0066180 Bnc2 protein_coding protein_coding MGP_129S1SvImJ_T0066181.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 83890753 84307378 - MGP_129S1SvImJ_P0066181 Bnc2 protein_coding protein_coding MGP_129S1SvImJ_T0066182.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 83891302 83907067 - MGP_129S1SvImJ_P0066182 Bnc2 protein_coding protein_coding MGP_129S1SvImJ_T0066183.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 83891388 83907283 - MGP_129S1SvImJ_P0066183 Bnc2 protein_coding protein_coding MGP_129S1SvImJ_T0066184.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 83891587 83907005 - MGP_129S1SvImJ_P0066184 Bnc2 protein_coding protein_coding MGP_129S1SvImJ_T0066185.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 83891587 83907005 - MGP_129S1SvImJ_P0066185 Bnc2 protein_coding protein_coding MGP_129S1SvImJ_T0066186.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 83908350 84307288 - MGP_129S1SvImJ_P0066186 Bnc2 protein_coding protein_coding MGP_129S1SvImJ_T0066187.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 83908350 84307288 - MGP_129S1SvImJ_P0066187 Bnc2 protein_coding protein_coding MGP_129S1SvImJ_T0066188.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 83908374 84127544 - Bnc2 protein_coding processed_transcript MGP_129S1SvImJ_T0066189.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 83908713 84307319 - MGP_129S1SvImJ_P0066189 Bnc2 protein_coding protein_coding MGP_129S1SvImJ_T0066190.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 83908740 84307289 - MGP_129S1SvImJ_P0066190 Bnc2 protein_coding protein_coding MGP_129S1SvImJ_T0066191.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 83908771 84154668 - Bnc2 protein_coding processed_transcript MGP_129S1SvImJ_T0066192.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 84005805 84307291 - Bnc2 protein_coding retained_intron MGP_129S1SvImJ_T0066193.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 84008049 84307289 - MGP_129S1SvImJ_P0066193 Bnc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066194.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 84008081 84169314 - Bnc2 protein_coding processed_transcript MGP_129S1SvImJ_T0066195.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 84008174 84307370 - MGP_129S1SvImJ_P0066195 Bnc2 protein_coding protein_coding MGP_129S1SvImJ_T0066196.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 84028237 84168985 - MGP_129S1SvImJ_P0066196 Bnc2 protein_coding protein_coding MGP_129S1SvImJ_T0066197.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 84028262 84145202 - Bnc2 protein_coding processed_transcript MGP_129S1SvImJ_T0066198.1 MGP_129S1SvImJ_G0028406.1 mouse_genomes_project 4 84168906 84307291 - MGP_129S1SvImJ_P0066198 Bnc2 protein_coding protein_coding MGP_129S1SvImJ_T0010581.1 MGP_129S1SvImJ_G0008697.1 mouse_genomes_project 4 9956 10058 + Mir3471-2 miRNA miRNA MGP_129S1SvImJ_T0018150.1 MGP_129S1SvImJ_G0015587.1 mouse_genomes_project 4 159951319 159970604 - Gm16023 processed_transcript processed_transcript MGP_129S1SvImJ_T0018151.1 MGP_129S1SvImJ_G0015587.1 mouse_genomes_project 4 159958985 159970329 - Gm16023 processed_transcript processed_transcript MGP_129S1SvImJ_T0069850.1 MGP_129S1SvImJ_G0029232.1 mouse_genomes_project 4 160209601 160212049 + MGP_129S1SvImJ_P0069850 Mxra8 protein_coding protein_coding MGP_129S1SvImJ_T0069851.1 MGP_129S1SvImJ_G0029232.1 mouse_genomes_project 4 160209647 160213972 + MGP_129S1SvImJ_P0069851 Mxra8 protein_coding protein_coding MGP_129S1SvImJ_T0069852.1 MGP_129S1SvImJ_G0029232.1 mouse_genomes_project 4 160209751 160211200 + Mxra8 protein_coding retained_intron MGP_129S1SvImJ_T0069853.1 MGP_129S1SvImJ_G0029232.1 mouse_genomes_project 4 160212194 160212837 + Mxra8 protein_coding retained_intron MGP_129S1SvImJ_T0069854.1 MGP_129S1SvImJ_G0029232.1 mouse_genomes_project 4 160212313 160213337 + Mxra8 protein_coding retained_intron MGP_129S1SvImJ_T0069855.1 MGP_129S1SvImJ_G0029232.1 mouse_genomes_project 4 160212334 160213454 + Mxra8 protein_coding retained_intron MGP_129S1SvImJ_T0069856.1 MGP_129S1SvImJ_G0029232.1 mouse_genomes_project 4 160212785 160213649 + Mxra8 protein_coding processed_transcript MGP_129S1SvImJ_T0099815.1 MGP_129S1SvImJ_G0037882.1 mouse_genomes_project 4 24933450 24933547 + Gm25173 snRNA snRNA MGP_129S1SvImJ_T0014704.1 MGP_129S1SvImJ_G0012793.1 mouse_genomes_project 4 102205330 102206043 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068722.1 MGP_129S1SvImJ_G0028973.1 mouse_genomes_project 4 139471870 139479180 - MGP_129S1SvImJ_P0068722 C1qb protein_coding protein_coding MGP_129S1SvImJ_T0069674.1 MGP_129S1SvImJ_G0029198.1 mouse_genomes_project 4 158954769 158956204 - MGP_129S1SvImJ_P0069674 Actrt2 protein_coding protein_coding MGP_129S1SvImJ_T0014773.1 MGP_129S1SvImJ_G0012862.1 mouse_genomes_project 4 122693259 122693584 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069308.1 MGP_129S1SvImJ_G0029134.1 mouse_genomes_project 4 152939893 152941618 - MGP_129S1SvImJ_P0069308 Cort protein_coding protein_coding MGP_129S1SvImJ_T0069134.1 MGP_129S1SvImJ_G0029088.1 mouse_genomes_project 4 147718455 147721934 + MGP_129S1SvImJ_P0069134 protein_coding protein_coding MGP_129S1SvImJ_T0014693.1 MGP_129S1SvImJ_G0012782.1 mouse_genomes_project 4 99656465 99656862 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068682.1 MGP_129S1SvImJ_G0028965.1 mouse_genomes_project 4 138854709 138909899 + MGP_129S1SvImJ_P0068682 Hnrnpr protein_coding protein_coding MGP_129S1SvImJ_T0068683.1 MGP_129S1SvImJ_G0028965.1 mouse_genomes_project 4 138854709 138888947 + MGP_129S1SvImJ_P0068683 Hnrnpr protein_coding protein_coding MGP_129S1SvImJ_T0068684.1 MGP_129S1SvImJ_G0028965.1 mouse_genomes_project 4 138854733 138891951 + MGP_129S1SvImJ_P0068684 Hnrnpr protein_coding protein_coding MGP_129S1SvImJ_T0068685.1 MGP_129S1SvImJ_G0028965.1 mouse_genomes_project 4 138854766 138889129 + MGP_129S1SvImJ_P0068685 Hnrnpr protein_coding protein_coding MGP_129S1SvImJ_T0068686.1 MGP_129S1SvImJ_G0028965.1 mouse_genomes_project 4 138854769 138877359 + MGP_129S1SvImJ_P0068686 Hnrnpr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068687.1 MGP_129S1SvImJ_G0028965.1 mouse_genomes_project 4 138855276 138875178 + MGP_129S1SvImJ_P0068687 Hnrnpr protein_coding protein_coding MGP_129S1SvImJ_T0068688.1 MGP_129S1SvImJ_G0028965.1 mouse_genomes_project 4 138855332 138877387 + MGP_129S1SvImJ_P0068688 Hnrnpr protein_coding protein_coding MGP_129S1SvImJ_T0068689.1 MGP_129S1SvImJ_G0028965.1 mouse_genomes_project 4 138855426 138860169 + MGP_129S1SvImJ_P0068689 Hnrnpr protein_coding protein_coding MGP_129S1SvImJ_T0068690.1 MGP_129S1SvImJ_G0028965.1 mouse_genomes_project 4 138883765 138887558 + Hnrnpr protein_coding retained_intron MGP_129S1SvImJ_T0068691.1 MGP_129S1SvImJ_G0028965.1 mouse_genomes_project 4 138886759 138891228 + Hnrnpr protein_coding retained_intron MGP_129S1SvImJ_T0068692.1 MGP_129S1SvImJ_G0028965.1 mouse_genomes_project 4 138905262 138907530 + Hnrnpr protein_coding processed_transcript MGP_129S1SvImJ_T0068007.1 MGP_129S1SvImJ_G0028827.1 mouse_genomes_project 4 131439430 131474828 - MGP_129S1SvImJ_P0068007 protein_coding protein_coding MGP_129S1SvImJ_T0068008.1 MGP_129S1SvImJ_G0028827.1 mouse_genomes_project 4 131439595 131440846 - protein_coding retained_intron MGP_129S1SvImJ_T0068009.1 MGP_129S1SvImJ_G0028827.1 mouse_genomes_project 4 131441410 131445941 - protein_coding retained_intron MGP_129S1SvImJ_T0068010.1 MGP_129S1SvImJ_G0028827.1 mouse_genomes_project 4 131445641 131450888 - protein_coding retained_intron MGP_129S1SvImJ_T0068011.1 MGP_129S1SvImJ_G0028827.1 mouse_genomes_project 4 131445788 131447735 - protein_coding retained_intron MGP_129S1SvImJ_T0068012.1 MGP_129S1SvImJ_G0028827.1 mouse_genomes_project 4 131445976 131447693 - protein_coding retained_intron MGP_129S1SvImJ_T0068013.1 MGP_129S1SvImJ_G0028827.1 mouse_genomes_project 4 131450477 131474806 - protein_coding retained_intron MGP_129S1SvImJ_T0066999.1 MGP_129S1SvImJ_G0028582.1 mouse_genomes_project 4 112777167 112789085 + Skint8 protein_coding processed_transcript MGP_129S1SvImJ_T0067000.1 MGP_129S1SvImJ_G0028582.1 mouse_genomes_project 4 112777173 112793573 + MGP_129S1SvImJ_P0067000 Skint8 protein_coding protein_coding MGP_129S1SvImJ_T0067001.1 MGP_129S1SvImJ_G0028582.1 mouse_genomes_project 4 112777268 112791777 + Skint8 protein_coding retained_intron MGP_129S1SvImJ_T0067002.1 MGP_129S1SvImJ_G0028582.1 mouse_genomes_project 4 112777332 112803656 + MGP_129S1SvImJ_P0067002 Skint8 protein_coding protein_coding MGP_129S1SvImJ_T0067003.1 MGP_129S1SvImJ_G0028582.1 mouse_genomes_project 4 112784077 112789233 + Skint8 protein_coding processed_transcript MGP_129S1SvImJ_T0064739.1 MGP_129S1SvImJ_G0028060.1 mouse_genomes_project 4 8738873 8788748 - MGP_129S1SvImJ_P0064739 Tmem67 protein_coding protein_coding MGP_129S1SvImJ_T0064740.1 MGP_129S1SvImJ_G0028060.1 mouse_genomes_project 4 8738881 8788729 - MGP_129S1SvImJ_P0064740 Tmem67 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064741.1 MGP_129S1SvImJ_G0028060.1 mouse_genomes_project 4 8739163 8792302 - MGP_129S1SvImJ_P0064741 Tmem67 protein_coding protein_coding MGP_129S1SvImJ_T0064742.1 MGP_129S1SvImJ_G0028060.1 mouse_genomes_project 4 8761969 8788798 - Tmem67 protein_coding retained_intron MGP_129S1SvImJ_T0064743.1 MGP_129S1SvImJ_G0028060.1 mouse_genomes_project 4 8770015 8788718 - Tmem67 protein_coding retained_intron MGP_129S1SvImJ_T0064744.1 MGP_129S1SvImJ_G0028060.1 mouse_genomes_project 4 8779378 8788723 - Tmem67 protein_coding retained_intron MGP_129S1SvImJ_T0064815.1 MGP_129S1SvImJ_G0028088.1 mouse_genomes_project 4 17127598 17816180 - MGP_129S1SvImJ_P0064815 Nkain3 protein_coding protein_coding MGP_129S1SvImJ_T0064816.1 MGP_129S1SvImJ_G0028088.1 mouse_genomes_project 4 17250998 17816479 - MGP_129S1SvImJ_P0064816 Nkain3 protein_coding protein_coding MGP_129S1SvImJ_T0068715.1 MGP_129S1SvImJ_G0028971.1 mouse_genomes_project 4 139202184 139221493 + MGP_129S1SvImJ_P0068715 Lactbl1 protein_coding protein_coding MGP_129S1SvImJ_T0066391.1 MGP_129S1SvImJ_G0028464.1 mouse_genomes_project 4 96615045 96652610 - MGP_129S1SvImJ_P0066391 Cyp2j6 protein_coding protein_coding MGP_129S1SvImJ_T0069081.1 MGP_129S1SvImJ_G0029061.1 mouse_genomes_project 4 144960606 144977391 - MGP_129S1SvImJ_P0069081 Efhd2 protein_coding protein_coding MGP_129S1SvImJ_T0014567.1 MGP_129S1SvImJ_G0012656.1 mouse_genomes_project 4 51424624 51426987 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066605.1 MGP_129S1SvImJ_G0028509.1 mouse_genomes_project 4 104077788 104673710 + Dab1 protein_coding processed_transcript MGP_129S1SvImJ_T0066606.1 MGP_129S1SvImJ_G0028509.1 mouse_genomes_project 4 104078094 105195720 + MGP_129S1SvImJ_P0066606 Dab1 protein_coding protein_coding MGP_129S1SvImJ_T0066607.1 MGP_129S1SvImJ_G0028509.1 mouse_genomes_project 4 104863179 105194834 + MGP_129S1SvImJ_P0066607 Dab1 protein_coding protein_coding MGP_129S1SvImJ_T0066608.1 MGP_129S1SvImJ_G0028509.1 mouse_genomes_project 4 104863655 105261652 + MGP_129S1SvImJ_P0066608 Dab1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066609.1 MGP_129S1SvImJ_G0028509.1 mouse_genomes_project 4 104863655 105264699 + MGP_129S1SvImJ_P0066609 Dab1 protein_coding protein_coding MGP_129S1SvImJ_T0066610.1 MGP_129S1SvImJ_G0028509.1 mouse_genomes_project 4 105015144 105195720 + MGP_129S1SvImJ_P0066610 Dab1 protein_coding protein_coding MGP_129S1SvImJ_T0066611.1 MGP_129S1SvImJ_G0028509.1 mouse_genomes_project 4 105102014 105194130 + Dab1 protein_coding processed_transcript MGP_129S1SvImJ_T0066612.1 MGP_129S1SvImJ_G0028509.1 mouse_genomes_project 4 105116088 105233656 + MGP_129S1SvImJ_P0066612 Dab1 protein_coding protein_coding MGP_129S1SvImJ_T0067095.1 MGP_129S1SvImJ_G0028612.1 mouse_genomes_project 4 116734955 116743517 + MGP_129S1SvImJ_P0067095 6430628N08Rik protein_coding protein_coding MGP_129S1SvImJ_T0067792.1 MGP_129S1SvImJ_G0028776.1 mouse_genomes_project 4 127932907 127945988 + MGP_129S1SvImJ_P0067792 Trappc3 protein_coding protein_coding MGP_129S1SvImJ_T0067793.1 MGP_129S1SvImJ_G0028776.1 mouse_genomes_project 4 127932982 127944071 + Trappc3 protein_coding processed_transcript MGP_129S1SvImJ_T0067834.1 MGP_129S1SvImJ_G0028788.1 mouse_genomes_project 4 128465422 128502584 + MGP_129S1SvImJ_P0067834 AU040320 protein_coding protein_coding MGP_129S1SvImJ_T0067835.1 MGP_129S1SvImJ_G0028788.1 mouse_genomes_project 4 128465431 128502695 + MGP_129S1SvImJ_P0067835 AU040320 protein_coding protein_coding MGP_129S1SvImJ_T0067836.1 MGP_129S1SvImJ_G0028788.1 mouse_genomes_project 4 128465433 128584522 + MGP_129S1SvImJ_P0067836 AU040320 protein_coding protein_coding MGP_129S1SvImJ_T0067837.1 MGP_129S1SvImJ_G0028788.1 mouse_genomes_project 4 128465648 128568683 + MGP_129S1SvImJ_P0067837 AU040320 protein_coding protein_coding MGP_129S1SvImJ_T0067838.1 MGP_129S1SvImJ_G0028788.1 mouse_genomes_project 4 128465648 128584522 + MGP_129S1SvImJ_P0067838 AU040320 protein_coding protein_coding MGP_129S1SvImJ_T0067839.1 MGP_129S1SvImJ_G0028788.1 mouse_genomes_project 4 128465672 128502598 + MGP_129S1SvImJ_P0067839 AU040320 protein_coding protein_coding MGP_129S1SvImJ_T0067840.1 MGP_129S1SvImJ_G0028788.1 mouse_genomes_project 4 128465692 128499024 + AU040320 protein_coding processed_transcript MGP_129S1SvImJ_T0067841.1 MGP_129S1SvImJ_G0028788.1 mouse_genomes_project 4 128465704 128466612 + AU040320 protein_coding processed_transcript MGP_129S1SvImJ_T0067842.1 MGP_129S1SvImJ_G0028788.1 mouse_genomes_project 4 128526863 128544058 + AU040320 protein_coding processed_transcript MGP_129S1SvImJ_T0067843.1 MGP_129S1SvImJ_G0028788.1 mouse_genomes_project 4 128547238 128553907 + AU040320 protein_coding processed_transcript MGP_129S1SvImJ_T0067844.1 MGP_129S1SvImJ_G0028788.1 mouse_genomes_project 4 128564676 128567898 + AU040320 protein_coding processed_transcript MGP_129S1SvImJ_T0068361.1 MGP_129S1SvImJ_G0028892.1 mouse_genomes_project 4 135530629 135576742 - MGP_129S1SvImJ_P0068361 Wdtc1 protein_coding protein_coding MGP_129S1SvImJ_T0068362.1 MGP_129S1SvImJ_G0028892.1 mouse_genomes_project 4 135546697 135591737 - Wdtc1 protein_coding processed_transcript MGP_129S1SvImJ_T0068363.1 MGP_129S1SvImJ_G0028892.1 mouse_genomes_project 4 135550970 135561761 - Wdtc1 protein_coding processed_transcript MGP_129S1SvImJ_T0068364.1 MGP_129S1SvImJ_G0028892.1 mouse_genomes_project 4 135551595 135592315 - Wdtc1 protein_coding processed_transcript MGP_129S1SvImJ_T0010582.1 MGP_129S1SvImJ_G0008698.1 mouse_genomes_project 4 6302681 6302753 + Gm25677 miRNA miRNA MGP_129S1SvImJ_T0004618.1 MGP_129S1SvImJ_G0004008.1 mouse_genomes_project 4 153817326 153821479 + Gm13070 antisense antisense MGP_129S1SvImJ_T0007820.1 MGP_129S1SvImJ_G0006393.1 mouse_genomes_project 4 16743947 16747102 - Gm12354 lincRNA lincRNA MGP_129S1SvImJ_T0007821.1 MGP_129S1SvImJ_G0006393.1 mouse_genomes_project 4 16743947 16747415 - Gm12354 lincRNA lincRNA MGP_129S1SvImJ_T0064860.1 MGP_129S1SvImJ_G0028096.1 mouse_genomes_project 4 19419719 19437572 + Fbxl4 protein_coding processed_transcript MGP_129S1SvImJ_T0064861.1 MGP_129S1SvImJ_G0028096.1 mouse_genomes_project 4 19419719 19496210 + MGP_129S1SvImJ_P0064861 Fbxl4 protein_coding protein_coding MGP_129S1SvImJ_T0064862.1 MGP_129S1SvImJ_G0028096.1 mouse_genomes_project 4 19419736 19496183 + MGP_129S1SvImJ_P0064862 Fbxl4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064863.1 MGP_129S1SvImJ_G0028096.1 mouse_genomes_project 4 19419747 19496207 + MGP_129S1SvImJ_P0064863 Fbxl4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064864.1 MGP_129S1SvImJ_G0028096.1 mouse_genomes_project 4 19419792 19496194 + MGP_129S1SvImJ_P0064864 Fbxl4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0014505.1 MGP_129S1SvImJ_G0012594.1 mouse_genomes_project 4 30449412 30449755 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065149.1 MGP_129S1SvImJ_G0028167.1 mouse_genomes_project 4 39616562 39660179 - MGP_129S1SvImJ_P0065149 Cntfr protein_coding protein_coding MGP_129S1SvImJ_T0065150.1 MGP_129S1SvImJ_G0028167.1 mouse_genomes_project 4 39616562 39661788 - MGP_129S1SvImJ_P0065150 Cntfr protein_coding protein_coding MGP_129S1SvImJ_T0065151.1 MGP_129S1SvImJ_G0028167.1 mouse_genomes_project 4 39623589 39624356 - Cntfr protein_coding processed_transcript MGP_129S1SvImJ_T0065152.1 MGP_129S1SvImJ_G0028167.1 mouse_genomes_project 4 39631263 39660182 - MGP_129S1SvImJ_P0065152 Cntfr protein_coding protein_coding MGP_129S1SvImJ_T0065153.1 MGP_129S1SvImJ_G0028167.1 mouse_genomes_project 4 39631263 39661837 - MGP_129S1SvImJ_P0065153 Cntfr protein_coding protein_coding MGP_129S1SvImJ_T0065154.1 MGP_129S1SvImJ_G0028167.1 mouse_genomes_project 4 39632571 39660672 - MGP_129S1SvImJ_P0065154 Cntfr protein_coding protein_coding MGP_129S1SvImJ_T0069380.1 MGP_129S1SvImJ_G0029146.1 mouse_genomes_project 4 153647009 153680999 - MGP_129S1SvImJ_P0069380 Slc25a33 protein_coding protein_coding MGP_129S1SvImJ_T0010598.1 MGP_129S1SvImJ_G0008714.1 mouse_genomes_project 4 34345378 34345455 + Mir873b miRNA miRNA MGP_129S1SvImJ_T0068471.1 MGP_129S1SvImJ_G0028915.1 mouse_genomes_project 4 136522607 136534511 - MGP_129S1SvImJ_P0068471 Gm7534 protein_coding protein_coding MGP_129S1SvImJ_T0064949.1 MGP_129S1SvImJ_G0028115.1 mouse_genomes_project 4 30449302 30449755 + MGP_129S1SvImJ_P0064949 protein_coding protein_coding MGP_129S1SvImJ_T0069227.1 MGP_129S1SvImJ_G0029120.1 mouse_genomes_project 4 151842790 151851405 - MGP_129S1SvImJ_P0069227 Fbxo44 protein_coding protein_coding MGP_129S1SvImJ_T0069228.1 MGP_129S1SvImJ_G0029120.1 mouse_genomes_project 4 151842793 151851904 - MGP_129S1SvImJ_P0069228 Fbxo44 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069229.1 MGP_129S1SvImJ_G0029120.1 mouse_genomes_project 4 151842793 151851893 - MGP_129S1SvImJ_P0069229 Fbxo44 protein_coding protein_coding MGP_129S1SvImJ_T0069230.1 MGP_129S1SvImJ_G0029120.1 mouse_genomes_project 4 151843257 151851686 - MGP_129S1SvImJ_P0069230 Fbxo44 protein_coding protein_coding MGP_129S1SvImJ_T0069231.1 MGP_129S1SvImJ_G0029120.1 mouse_genomes_project 4 151843527 151850304 - MGP_129S1SvImJ_P0069231 Fbxo44 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069232.1 MGP_129S1SvImJ_G0029120.1 mouse_genomes_project 4 151843562 151851684 - MGP_129S1SvImJ_P0069232 Fbxo44 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069233.1 MGP_129S1SvImJ_G0029120.1 mouse_genomes_project 4 151843562 151851459 - MGP_129S1SvImJ_P0069233 Fbxo44 protein_coding protein_coding MGP_129S1SvImJ_T0069234.1 MGP_129S1SvImJ_G0029120.1 mouse_genomes_project 4 151847197 151851660 - MGP_129S1SvImJ_P0069234 Fbxo44 protein_coding protein_coding MGP_129S1SvImJ_T0069235.1 MGP_129S1SvImJ_G0029120.1 mouse_genomes_project 4 151847847 151851658 - MGP_129S1SvImJ_P0069235 Fbxo44 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069236.1 MGP_129S1SvImJ_G0029120.1 mouse_genomes_project 4 151847867 151852292 - MGP_129S1SvImJ_P0069236 Fbxo44 protein_coding protein_coding MGP_129S1SvImJ_T0068227.1 MGP_129S1SvImJ_G0028862.1 mouse_genomes_project 4 134195678 134197974 + MGP_129S1SvImJ_P0068227 Gm10300 protein_coding protein_coding MGP_129S1SvImJ_T0067436.1 MGP_129S1SvImJ_G0028686.1 mouse_genomes_project 4 120110994 120118313 + MGP_129S1SvImJ_P0067436 Lao1 protein_coding protein_coding MGP_129S1SvImJ_T0067437.1 MGP_129S1SvImJ_G0028686.1 mouse_genomes_project 4 120114782 120117484 + Lao1 protein_coding processed_transcript MGP_129S1SvImJ_T0014482.1 MGP_129S1SvImJ_G0012571.1 mouse_genomes_project 4 24285436 24285684 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064766.1 MGP_129S1SvImJ_G0028066.1 mouse_genomes_project 4 11304467 11438853 - MGP_129S1SvImJ_P0064766 Slc26a7 protein_coding protein_coding MGP_129S1SvImJ_T0064767.1 MGP_129S1SvImJ_G0028066.1 mouse_genomes_project 4 11307326 11318332 - Slc26a7 protein_coding processed_transcript MGP_129S1SvImJ_T0064768.1 MGP_129S1SvImJ_G0028066.1 mouse_genomes_project 4 11376070 11438575 - MGP_129S1SvImJ_P0064768 Slc26a7 protein_coding protein_coding MGP_129S1SvImJ_T0064769.1 MGP_129S1SvImJ_G0028066.1 mouse_genomes_project 4 11400943 11438717 - MGP_129S1SvImJ_P0064769 Slc26a7 protein_coding protein_coding MGP_129S1SvImJ_T0069670.1 MGP_129S1SvImJ_G0029197.1 mouse_genomes_project 4 158604020 158617822 + MGP_129S1SvImJ_P0069670 B230104I21Rik protein_coding protein_coding MGP_129S1SvImJ_T0066491.1 MGP_129S1SvImJ_G0028486.1 mouse_genomes_project 4 100340733 100718845 + MGP_129S1SvImJ_P0066491 Ror1 protein_coding protein_coding MGP_129S1SvImJ_T0014856.1 MGP_129S1SvImJ_G0012945.1 mouse_genomes_project 4 158292772 158292878 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065525.1 MGP_129S1SvImJ_G0028239.1 mouse_genomes_project 4 43226150 43241289 + MGP_129S1SvImJ_P0065525 Polr1e protein_coding protein_coding MGP_129S1SvImJ_T0065526.1 MGP_129S1SvImJ_G0028239.1 mouse_genomes_project 4 43226229 43239962 + MGP_129S1SvImJ_P0065526 Polr1e protein_coding protein_coding MGP_129S1SvImJ_T0065527.1 MGP_129S1SvImJ_G0028239.1 mouse_genomes_project 4 43226230 43244162 + MGP_129S1SvImJ_P0065527 Polr1e protein_coding protein_coding MGP_129S1SvImJ_T0065528.1 MGP_129S1SvImJ_G0028239.1 mouse_genomes_project 4 43226264 43234438 + Polr1e protein_coding processed_transcript MGP_129S1SvImJ_T0065529.1 MGP_129S1SvImJ_G0028239.1 mouse_genomes_project 4 43226802 43239709 + MGP_129S1SvImJ_P0065529 Polr1e protein_coding protein_coding MGP_129S1SvImJ_T0065530.1 MGP_129S1SvImJ_G0028239.1 mouse_genomes_project 4 43236711 43238982 + Polr1e protein_coding processed_transcript MGP_129S1SvImJ_T0065531.1 MGP_129S1SvImJ_G0028239.1 mouse_genomes_project 4 43238829 43239957 + Polr1e protein_coding processed_transcript MGP_129S1SvImJ_T0066775.1 MGP_129S1SvImJ_G0028544.1 mouse_genomes_project 4 108592836 108602407 + MGP_129S1SvImJ_P0066775 0610037L13Rik protein_coding protein_coding MGP_129S1SvImJ_T0066776.1 MGP_129S1SvImJ_G0028544.1 mouse_genomes_project 4 108592848 108600003 + MGP_129S1SvImJ_P0066776 0610037L13Rik protein_coding protein_coding MGP_129S1SvImJ_T0066777.1 MGP_129S1SvImJ_G0028544.1 mouse_genomes_project 4 108592872 108600285 + 0610037L13Rik protein_coding processed_transcript MGP_129S1SvImJ_T0066778.1 MGP_129S1SvImJ_G0028544.1 mouse_genomes_project 4 108592886 108600141 + MGP_129S1SvImJ_P0066778 0610037L13Rik protein_coding protein_coding MGP_129S1SvImJ_T0066779.1 MGP_129S1SvImJ_G0028544.1 mouse_genomes_project 4 108592889 108598884 + MGP_129S1SvImJ_P0066779 0610037L13Rik protein_coding protein_coding MGP_129S1SvImJ_T0066780.1 MGP_129S1SvImJ_G0028544.1 mouse_genomes_project 4 108592892 108598369 + MGP_129S1SvImJ_P0066780 0610037L13Rik protein_coding protein_coding MGP_129S1SvImJ_T0066781.1 MGP_129S1SvImJ_G0028544.1 mouse_genomes_project 4 108592921 108600141 + MGP_129S1SvImJ_P0066781 0610037L13Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066782.1 MGP_129S1SvImJ_G0028544.1 mouse_genomes_project 4 108592922 108600825 + MGP_129S1SvImJ_P0066782 0610037L13Rik protein_coding protein_coding MGP_129S1SvImJ_T0066783.1 MGP_129S1SvImJ_G0028544.1 mouse_genomes_project 4 108592931 108595026 + MGP_129S1SvImJ_P0066783 0610037L13Rik protein_coding protein_coding MGP_129S1SvImJ_T0066784.1 MGP_129S1SvImJ_G0028544.1 mouse_genomes_project 4 108593142 108600187 + 0610037L13Rik protein_coding processed_transcript MGP_129S1SvImJ_T0066785.1 MGP_129S1SvImJ_G0028544.1 mouse_genomes_project 4 108593250 108600080 + 0610037L13Rik protein_coding processed_transcript MGP_129S1SvImJ_T0066786.1 MGP_129S1SvImJ_G0028544.1 mouse_genomes_project 4 108593263 108600141 + 0610037L13Rik protein_coding processed_transcript MGP_129S1SvImJ_T0066787.1 MGP_129S1SvImJ_G0028544.1 mouse_genomes_project 4 108596196 108600076 + 0610037L13Rik protein_coding retained_intron MGP_129S1SvImJ_T0066788.1 MGP_129S1SvImJ_G0028544.1 mouse_genomes_project 4 108596392 108600141 + MGP_129S1SvImJ_P0066788 0610037L13Rik protein_coding protein_coding MGP_129S1SvImJ_T0065099.1 MGP_129S1SvImJ_G0028154.1 mouse_genomes_project 4 39014822 39020280 - MGP_129S1SvImJ_P0065099 Aqp3 protein_coding protein_coding MGP_129S1SvImJ_T0065100.1 MGP_129S1SvImJ_G0028154.1 mouse_genomes_project 4 39015878 39016545 - Aqp3 protein_coding retained_intron MGP_129S1SvImJ_T0010602.1 MGP_129S1SvImJ_G0008718.1 mouse_genomes_project 4 38756587 38756670 - Gm24112 miRNA miRNA MGP_129S1SvImJ_T0014420.1 MGP_129S1SvImJ_G0012509.1 mouse_genomes_project 4 7779908 7780190 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014833.1 MGP_129S1SvImJ_G0012922.1 mouse_genomes_project 4 146613195 146613955 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064817.1 MGP_129S1SvImJ_G0028089.1 mouse_genomes_project 4 18693677 18702167 - Prdm13 protein_coding processed_transcript MGP_129S1SvImJ_T0064818.1 MGP_129S1SvImJ_G0028089.1 mouse_genomes_project 4 18693678 18702167 - MGP_129S1SvImJ_P0064818 Prdm13 protein_coding protein_coding MGP_129S1SvImJ_T0064819.1 MGP_129S1SvImJ_G0028089.1 mouse_genomes_project 4 18693678 18701987 - MGP_129S1SvImJ_P0064819 Prdm13 protein_coding protein_coding MGP_129S1SvImJ_T0064820.1 MGP_129S1SvImJ_G0028089.1 mouse_genomes_project 4 18695862 18701987 - Prdm13 protein_coding processed_transcript MGP_129S1SvImJ_T0064821.1 MGP_129S1SvImJ_G0028089.1 mouse_genomes_project 4 18695944 18701985 - Prdm13 protein_coding processed_transcript MGP_129S1SvImJ_T0064822.1 MGP_129S1SvImJ_G0028089.1 mouse_genomes_project 4 18698498 18702049 - Prdm13 protein_coding retained_intron MGP_129S1SvImJ_T0064886.1 MGP_129S1SvImJ_G0028101.1 mouse_genomes_project 4 22086531 22129345 + Gpr63 protein_coding processed_transcript MGP_129S1SvImJ_T0064887.1 MGP_129S1SvImJ_G0028101.1 mouse_genomes_project 4 22093547 22131278 + MGP_129S1SvImJ_P0064887 Gpr63 protein_coding protein_coding MGP_129S1SvImJ_T0065914.1 MGP_129S1SvImJ_G0028342.1 mouse_genomes_project 4 58938284 58941098 + MGP_129S1SvImJ_P0065914 Mup6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0066322.1 MGP_129S1SvImJ_G0028447.1 mouse_genomes_project 4 93337411 93338786 - MGP_129S1SvImJ_P0066322 Tusc1 protein_coding protein_coding MGP_129S1SvImJ_T0008016.1 MGP_129S1SvImJ_G0006543.1 mouse_genomes_project 4 142783312 142786270 + lincRNA lincRNA MGP_129S1SvImJ_T0066495.1 MGP_129S1SvImJ_G0028488.1 mouse_genomes_project 4 101048301 101294598 + MGP_129S1SvImJ_P0066495 Cachd1 protein_coding protein_coding MGP_129S1SvImJ_T0066496.1 MGP_129S1SvImJ_G0028488.1 mouse_genomes_project 4 101048301 101313337 + MGP_129S1SvImJ_P0066496 Cachd1 protein_coding protein_coding MGP_129S1SvImJ_T0066497.1 MGP_129S1SvImJ_G0028488.1 mouse_genomes_project 4 101284650 101293122 + Cachd1 protein_coding processed_transcript MGP_129S1SvImJ_T0066498.1 MGP_129S1SvImJ_G0028488.1 mouse_genomes_project 4 101284749 101293292 + Cachd1 protein_coding processed_transcript MGP_129S1SvImJ_T0102520.1 MGP_129S1SvImJ_G0040353.1 mouse_genomes_project 4 73089715 73090411 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0068172.1 MGP_129S1SvImJ_G0028855.1 mouse_genomes_project 4 132967432 132990326 + MGP_129S1SvImJ_P0068172 Laptm5 protein_coding protein_coding MGP_129S1SvImJ_T0068173.1 MGP_129S1SvImJ_G0028855.1 mouse_genomes_project 4 132967614 132982855 + MGP_129S1SvImJ_P0068173 Laptm5 protein_coding protein_coding MGP_129S1SvImJ_T0068174.1 MGP_129S1SvImJ_G0028855.1 mouse_genomes_project 4 132967620 132979232 + Laptm5 protein_coding processed_transcript MGP_129S1SvImJ_T0068175.1 MGP_129S1SvImJ_G0028855.1 mouse_genomes_project 4 132967626 132982858 + Laptm5 protein_coding processed_transcript MGP_129S1SvImJ_T0068176.1 MGP_129S1SvImJ_G0028855.1 mouse_genomes_project 4 132967627 132980531 + Laptm5 protein_coding processed_transcript MGP_129S1SvImJ_T0068177.1 MGP_129S1SvImJ_G0028855.1 mouse_genomes_project 4 132967664 132988032 + MGP_129S1SvImJ_P0068177 Laptm5 protein_coding protein_coding MGP_129S1SvImJ_T0068178.1 MGP_129S1SvImJ_G0028855.1 mouse_genomes_project 4 132969766 132982876 + Laptm5 protein_coding processed_transcript MGP_129S1SvImJ_T0068179.1 MGP_129S1SvImJ_G0028855.1 mouse_genomes_project 4 132969964 132981018 + Laptm5 protein_coding processed_transcript MGP_129S1SvImJ_T0068180.1 MGP_129S1SvImJ_G0028855.1 mouse_genomes_project 4 132970247 132989443 + MGP_129S1SvImJ_P0068180 Laptm5 protein_coding protein_coding MGP_129S1SvImJ_T0068181.1 MGP_129S1SvImJ_G0028855.1 mouse_genomes_project 4 132986197 132988316 + Laptm5 protein_coding processed_transcript MGP_129S1SvImJ_T0010628.1 MGP_129S1SvImJ_G0008744.1 mouse_genomes_project 4 108807356 108807449 + Mir6397 miRNA miRNA MGP_129S1SvImJ_T0069169.1 MGP_129S1SvImJ_G0029104.1 mouse_genomes_project 4 151288579 151293824 - MGP_129S1SvImJ_P0069169 protein_coding protein_coding MGP_129S1SvImJ_T0068057.1 MGP_129S1SvImJ_G0028834.1 mouse_genomes_project 4 131557039 131558181 - Ccdc28b protein_coding processed_transcript MGP_129S1SvImJ_T0068058.1 MGP_129S1SvImJ_G0028834.1 mouse_genomes_project 4 131557039 131561513 - MGP_129S1SvImJ_P0068058 Ccdc28b protein_coding protein_coding MGP_129S1SvImJ_T0068059.1 MGP_129S1SvImJ_G0028834.1 mouse_genomes_project 4 131557040 131558504 - Ccdc28b protein_coding retained_intron MGP_129S1SvImJ_T0068060.1 MGP_129S1SvImJ_G0028834.1 mouse_genomes_project 4 131557041 131559010 - Ccdc28b protein_coding processed_transcript MGP_129S1SvImJ_T0068061.1 MGP_129S1SvImJ_G0028834.1 mouse_genomes_project 4 131557041 131561403 - MGP_129S1SvImJ_P0068061 Ccdc28b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068062.1 MGP_129S1SvImJ_G0028834.1 mouse_genomes_project 4 131558064 131561444 - MGP_129S1SvImJ_P0068062 Ccdc28b protein_coding protein_coding MGP_129S1SvImJ_T0068063.1 MGP_129S1SvImJ_G0028834.1 mouse_genomes_project 4 131558337 131560291 - Ccdc28b protein_coding processed_transcript MGP_129S1SvImJ_T0068064.1 MGP_129S1SvImJ_G0028834.1 mouse_genomes_project 4 131558591 131561452 - MGP_129S1SvImJ_P0068064 Ccdc28b protein_coding protein_coding MGP_129S1SvImJ_T0068065.1 MGP_129S1SvImJ_G0028834.1 mouse_genomes_project 4 131559743 131561410 - Ccdc28b protein_coding retained_intron MGP_129S1SvImJ_T0068066.1 MGP_129S1SvImJ_G0028834.1 mouse_genomes_project 4 131560865 131561465 - Ccdc28b protein_coding retained_intron MGP_129S1SvImJ_T0065791.1 MGP_129S1SvImJ_G0028311.1 mouse_genomes_project 4 55564730 55567011 + Fam206a protein_coding retained_intron MGP_129S1SvImJ_T0065792.1 MGP_129S1SvImJ_G0028311.1 mouse_genomes_project 4 55564734 55571987 + MGP_129S1SvImJ_P0065792 Fam206a protein_coding protein_coding MGP_129S1SvImJ_T0065793.1 MGP_129S1SvImJ_G0028311.1 mouse_genomes_project 4 55564737 55571987 + MGP_129S1SvImJ_P0065793 Fam206a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065794.1 MGP_129S1SvImJ_G0028311.1 mouse_genomes_project 4 55565003 55568333 + MGP_129S1SvImJ_P0065794 Fam206a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0014497.1 MGP_129S1SvImJ_G0012586.1 mouse_genomes_project 4 28125677 28126240 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068861.1 MGP_129S1SvImJ_G0029009.1 mouse_genomes_project 4 141778752 141797979 + MGP_129S1SvImJ_P0068861 Tmco4 protein_coding protein_coding MGP_129S1SvImJ_T0068862.1 MGP_129S1SvImJ_G0029009.1 mouse_genomes_project 4 141778756 141867313 + MGP_129S1SvImJ_P0068862 Tmco4 protein_coding protein_coding MGP_129S1SvImJ_T0068863.1 MGP_129S1SvImJ_G0029009.1 mouse_genomes_project 4 141778769 141867309 + MGP_129S1SvImJ_P0068863 Tmco4 protein_coding protein_coding MGP_129S1SvImJ_T0068864.1 MGP_129S1SvImJ_G0029009.1 mouse_genomes_project 4 141778773 141841414 + Tmco4 protein_coding processed_transcript MGP_129S1SvImJ_T0064696.1 MGP_129S1SvImJ_G0028050.1 mouse_genomes_project 4 7846757 7902318 - MGP_129S1SvImJ_P0064696 Ints8 protein_coding protein_coding MGP_129S1SvImJ_T0064697.1 MGP_129S1SvImJ_G0028050.1 mouse_genomes_project 4 7851721 7860284 - Ints8 protein_coding processed_transcript MGP_129S1SvImJ_T0064698.1 MGP_129S1SvImJ_G0028050.1 mouse_genomes_project 4 7851992 7883777 - Ints8 protein_coding processed_transcript MGP_129S1SvImJ_T0064699.1 MGP_129S1SvImJ_G0028050.1 mouse_genomes_project 4 7851994 7902318 - MGP_129S1SvImJ_P0064699 Ints8 protein_coding protein_coding MGP_129S1SvImJ_T0064700.1 MGP_129S1SvImJ_G0028050.1 mouse_genomes_project 4 7851994 7902318 - MGP_129S1SvImJ_P0064700 Ints8 protein_coding protein_coding MGP_129S1SvImJ_T0064701.1 MGP_129S1SvImJ_G0028050.1 mouse_genomes_project 4 7851995 7860851 - Ints8 protein_coding processed_transcript MGP_129S1SvImJ_T0064702.1 MGP_129S1SvImJ_G0028050.1 mouse_genomes_project 4 7856365 7867001 - Ints8 protein_coding processed_transcript MGP_129S1SvImJ_T0064703.1 MGP_129S1SvImJ_G0028050.1 mouse_genomes_project 4 7880796 7884179 - Ints8 protein_coding processed_transcript MGP_129S1SvImJ_T0014509.1 MGP_129S1SvImJ_G0012598.1 mouse_genomes_project 4 30709727 30709917 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004534.1 MGP_129S1SvImJ_G0003943.1 mouse_genomes_project 4 118888026 118890401 + Gm12841 antisense antisense MGP_129S1SvImJ_T0007892.1 MGP_129S1SvImJ_G0006455.1 mouse_genomes_project 4 83645099 83647940 - 6030471H07Rik lincRNA lincRNA MGP_129S1SvImJ_T0014796.1 MGP_129S1SvImJ_G0012885.1 mouse_genomes_project 4 129163692 129164112 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004570.1 MGP_129S1SvImJ_G0003972.1 mouse_genomes_project 4 137554218 137555083 - Gm16224 antisense antisense MGP_129S1SvImJ_T0066718.1 MGP_129S1SvImJ_G0028535.1 mouse_genomes_project 4 107913789 107933790 - MGP_129S1SvImJ_P0066718 Lrrc42 protein_coding protein_coding MGP_129S1SvImJ_T0066719.1 MGP_129S1SvImJ_G0028535.1 mouse_genomes_project 4 107913792 107923790 - Lrrc42 protein_coding retained_intron MGP_129S1SvImJ_T0066720.1 MGP_129S1SvImJ_G0028535.1 mouse_genomes_project 4 107914032 107916254 - Lrrc42 protein_coding retained_intron MGP_129S1SvImJ_T0066721.1 MGP_129S1SvImJ_G0028535.1 mouse_genomes_project 4 107914212 107920016 - MGP_129S1SvImJ_P0066721 Lrrc42 protein_coding protein_coding MGP_129S1SvImJ_T0066722.1 MGP_129S1SvImJ_G0028535.1 mouse_genomes_project 4 107927670 107933418 - MGP_129S1SvImJ_P0066722 Lrrc42 protein_coding protein_coding MGP_129S1SvImJ_T0065198.1 MGP_129S1SvImJ_G0028178.1 mouse_genomes_project 4 39784587 39785194 - MGP_129S1SvImJ_P0065198 Gm10931 protein_coding protein_coding MGP_129S1SvImJ_T0014470.1 MGP_129S1SvImJ_G0012559.1 mouse_genomes_project 4 21342725 21343928 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067313.1 MGP_129S1SvImJ_G0028653.1 mouse_genomes_project 4 118712042 118714503 + MGP_129S1SvImJ_P0067313 Gm12845 protein_coding protein_coding MGP_129S1SvImJ_T0007829.1 MGP_129S1SvImJ_G0006401.1 mouse_genomes_project 4 26367847 26388648 + Gm11917 lincRNA lincRNA MGP_129S1SvImJ_T0004626.1 MGP_129S1SvImJ_G0004016.1 mouse_genomes_project 4 158886039 158889045 + Gm13134 antisense antisense MGP_129S1SvImJ_T0004627.1 MGP_129S1SvImJ_G0004016.1 mouse_genomes_project 4 158886157 158887547 + Gm13134 antisense antisense MGP_129S1SvImJ_T0069720.1 MGP_129S1SvImJ_G0029207.1 mouse_genomes_project 4 159363685 159377004 - Rer1 protein_coding processed_transcript MGP_129S1SvImJ_T0069721.1 MGP_129S1SvImJ_G0029207.1 mouse_genomes_project 4 159364514 159377027 - MGP_129S1SvImJ_P0069721 Rer1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0069722.1 MGP_129S1SvImJ_G0029207.1 mouse_genomes_project 4 159373317 159377015 - Rer1 protein_coding processed_transcript MGP_129S1SvImJ_T0068870.1 MGP_129S1SvImJ_G0029012.1 mouse_genomes_project 4 141912704 141944789 - MGP_129S1SvImJ_P0068870 Minos1 protein_coding protein_coding MGP_129S1SvImJ_T0068871.1 MGP_129S1SvImJ_G0029012.1 mouse_genomes_project 4 141914681 141916850 - Minos1 protein_coding processed_transcript MGP_129S1SvImJ_T0068872.1 MGP_129S1SvImJ_G0029012.1 mouse_genomes_project 4 141914713 141922134 - Minos1 protein_coding processed_transcript MGP_129S1SvImJ_T0068873.1 MGP_129S1SvImJ_G0029012.1 mouse_genomes_project 4 141914792 141944670 - Minos1 protein_coding processed_transcript MGP_129S1SvImJ_T0018145.1 MGP_129S1SvImJ_G0015585.1 mouse_genomes_project 4 159247714 159248623 - Gm20421 processed_transcript processed_transcript MGP_129S1SvImJ_T0102533.1 MGP_129S1SvImJ_G0040366.1 mouse_genomes_project 4 113058765 113059833 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0067025.1 MGP_129S1SvImJ_G0028592.1 mouse_genomes_project 4 115723030 115753584 - MGP_129S1SvImJ_P0067025 Cmpk1 protein_coding protein_coding MGP_129S1SvImJ_T0067026.1 MGP_129S1SvImJ_G0028592.1 mouse_genomes_project 4 115729196 115753492 - MGP_129S1SvImJ_P0067026 Cmpk1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067027.1 MGP_129S1SvImJ_G0028592.1 mouse_genomes_project 4 115735687 115753415 - MGP_129S1SvImJ_P0067027 Cmpk1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067028.1 MGP_129S1SvImJ_G0028592.1 mouse_genomes_project 4 115751160 115753492 - Cmpk1 protein_coding processed_transcript MGP_129S1SvImJ_T0010644.1 MGP_129S1SvImJ_G0008760.1 mouse_genomes_project 4 134109288 134109360 - Gm27445 miRNA miRNA MGP_129S1SvImJ_T0065449.1 MGP_129S1SvImJ_G0028231.1 mouse_genomes_project 4 42142141 42173635 + MGP_129S1SvImJ_P0065449 Clta protein_coding protein_coding MGP_129S1SvImJ_T0065450.1 MGP_129S1SvImJ_G0028231.1 mouse_genomes_project 4 42153125 42173635 + MGP_129S1SvImJ_P0065450 Clta protein_coding protein_coding MGP_129S1SvImJ_T0065451.1 MGP_129S1SvImJ_G0028231.1 mouse_genomes_project 4 42153130 42173634 + MGP_129S1SvImJ_P0065451 Clta protein_coding protein_coding MGP_129S1SvImJ_T0065452.1 MGP_129S1SvImJ_G0028231.1 mouse_genomes_project 4 42153165 42173635 + MGP_129S1SvImJ_P0065452 Clta protein_coding protein_coding MGP_129S1SvImJ_T0065453.1 MGP_129S1SvImJ_G0028231.1 mouse_genomes_project 4 42153165 42173635 + MGP_129S1SvImJ_P0065453 Clta protein_coding protein_coding MGP_129S1SvImJ_T0065454.1 MGP_129S1SvImJ_G0028231.1 mouse_genomes_project 4 42153173 42173635 + MGP_129S1SvImJ_P0065454 Clta protein_coding protein_coding MGP_129S1SvImJ_T0069196.1 MGP_129S1SvImJ_G0029112.1 mouse_genomes_project 4 151674521 151675939 + MGP_129S1SvImJ_P0069196 Nppb protein_coding protein_coding MGP_129S1SvImJ_T0007942.1 MGP_129S1SvImJ_G0006494.1 mouse_genomes_project 4 117031667 117033150 + Gm12951 lincRNA lincRNA MGP_129S1SvImJ_T0099818.1 MGP_129S1SvImJ_G0037885.1 mouse_genomes_project 4 31643840 31643948 + Gm25623 snRNA snRNA MGP_129S1SvImJ_T0018108.1 MGP_129S1SvImJ_G0015566.1 mouse_genomes_project 4 110339896 110427571 + Gm12811 processed_transcript processed_transcript MGP_129S1SvImJ_T0014823.1 MGP_129S1SvImJ_G0012912.1 mouse_genomes_project 4 139826833 139827445 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007802.1 MGP_129S1SvImJ_G0006380.1 mouse_genomes_project 4 2154874 2167598 + 4930423M02Rik lincRNA lincRNA MGP_129S1SvImJ_T0007803.1 MGP_129S1SvImJ_G0006380.1 mouse_genomes_project 4 2154882 2167071 + 4930423M02Rik lincRNA lincRNA MGP_129S1SvImJ_T0069533.1 MGP_129S1SvImJ_G0029174.1 mouse_genomes_project 4 156258648 156262250 + MGP_129S1SvImJ_P0069533 Hes2 protein_coding protein_coding MGP_129S1SvImJ_T0069534.1 MGP_129S1SvImJ_G0029174.1 mouse_genomes_project 4 156259330 156260381 + Hes2 protein_coding processed_transcript MGP_129S1SvImJ_T0101168.1 MGP_129S1SvImJ_G0039235.1 mouse_genomes_project 4 134498664 134498869 - Snora73a snoRNA snoRNA MGP_129S1SvImJ_T0004459.1 MGP_129S1SvImJ_G0003888.1 mouse_genomes_project 4 39598210 39599103 + Gm12405 antisense antisense MGP_129S1SvImJ_T0014612.1 MGP_129S1SvImJ_G0012701.1 mouse_genomes_project 4 70506757 70507194 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066829.1 MGP_129S1SvImJ_G0028551.1 mouse_genomes_project 4 108952738 109020511 - MGP_129S1SvImJ_P0066829 Zyg11b protein_coding protein_coding MGP_129S1SvImJ_T0068799.1 MGP_129S1SvImJ_G0028990.1 mouse_genomes_project 4 140929362 140960222 + MGP_129S1SvImJ_P0068799 Hp1bp3 protein_coding protein_coding MGP_129S1SvImJ_T0068800.1 MGP_129S1SvImJ_G0028990.1 mouse_genomes_project 4 140929620 140960225 + MGP_129S1SvImJ_P0068800 Hp1bp3 protein_coding protein_coding MGP_129S1SvImJ_T0068801.1 MGP_129S1SvImJ_G0028990.1 mouse_genomes_project 4 140929637 140934695 + Hp1bp3 protein_coding processed_transcript MGP_129S1SvImJ_T0068802.1 MGP_129S1SvImJ_G0028990.1 mouse_genomes_project 4 140929663 140940211 + MGP_129S1SvImJ_P0068802 Hp1bp3 protein_coding protein_coding MGP_129S1SvImJ_T0068803.1 MGP_129S1SvImJ_G0028990.1 mouse_genomes_project 4 140929664 140958687 + MGP_129S1SvImJ_P0068803 Hp1bp3 protein_coding protein_coding MGP_129S1SvImJ_T0068804.1 MGP_129S1SvImJ_G0028990.1 mouse_genomes_project 4 140929671 140944399 + MGP_129S1SvImJ_P0068804 Hp1bp3 protein_coding protein_coding MGP_129S1SvImJ_T0068805.1 MGP_129S1SvImJ_G0028990.1 mouse_genomes_project 4 140929672 140960222 + MGP_129S1SvImJ_P0068805 Hp1bp3 protein_coding protein_coding MGP_129S1SvImJ_T0068806.1 MGP_129S1SvImJ_G0028990.1 mouse_genomes_project 4 140930164 140945374 + MGP_129S1SvImJ_P0068806 Hp1bp3 protein_coding protein_coding MGP_129S1SvImJ_T0068807.1 MGP_129S1SvImJ_G0028990.1 mouse_genomes_project 4 140930305 140945361 + Hp1bp3 protein_coding retained_intron MGP_129S1SvImJ_T0068808.1 MGP_129S1SvImJ_G0028990.1 mouse_genomes_project 4 140930331 140936588 + MGP_129S1SvImJ_P0068808 Hp1bp3 protein_coding protein_coding MGP_129S1SvImJ_T0068809.1 MGP_129S1SvImJ_G0028990.1 mouse_genomes_project 4 140944206 140956274 + MGP_129S1SvImJ_P0068809 Hp1bp3 protein_coding protein_coding MGP_129S1SvImJ_T0068810.1 MGP_129S1SvImJ_G0028990.1 mouse_genomes_project 4 140945273 140950046 + Hp1bp3 protein_coding processed_transcript MGP_129S1SvImJ_T0014485.1 MGP_129S1SvImJ_G0012574.1 mouse_genomes_project 4 25252354 25252677 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102539.1 MGP_129S1SvImJ_G0040372.1 mouse_genomes_project 4 118107941 118111322 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0007823.1 MGP_129S1SvImJ_G0006395.1 mouse_genomes_project 4 19559812 19562370 + Gm30731 lincRNA lincRNA MGP_129S1SvImJ_T0007883.1 MGP_129S1SvImJ_G0006448.1 mouse_genomes_project 4 71205960 71225913 + lincRNA lincRNA MGP_129S1SvImJ_T0069129.1 MGP_129S1SvImJ_G0029084.1 mouse_genomes_project 4 147712628 147722319 + MGP_129S1SvImJ_P0069129 protein_coding protein_coding MGP_129S1SvImJ_T0099869.1 MGP_129S1SvImJ_G0037936.1 mouse_genomes_project 4 125848431 125848535 - Gm22983 snRNA snRNA MGP_129S1SvImJ_T0011575.1 MGP_129S1SvImJ_G0009691.1 mouse_genomes_project 4 8622249 8622565 + Gm22477 misc_RNA misc_RNA MGP_129S1SvImJ_T0099870.1 MGP_129S1SvImJ_G0037937.1 mouse_genomes_project 4 126242300 126242403 - Gm24480 snRNA snRNA MGP_129S1SvImJ_T0065303.1 MGP_129S1SvImJ_G0028202.1 mouse_genomes_project 4 41365136 41445791 + Atp8b5 protein_coding retained_intron MGP_129S1SvImJ_T0065304.1 MGP_129S1SvImJ_G0028202.1 mouse_genomes_project 4 41365147 41476823 + MGP_129S1SvImJ_P0065304 Atp8b5 protein_coding protein_coding MGP_129S1SvImJ_T0065305.1 MGP_129S1SvImJ_G0028202.1 mouse_genomes_project 4 41365162 41476825 + MGP_129S1SvImJ_P0065305 Atp8b5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065306.1 MGP_129S1SvImJ_G0028202.1 mouse_genomes_project 4 41365162 41420491 + MGP_129S1SvImJ_P0065306 Atp8b5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065307.1 MGP_129S1SvImJ_G0028202.1 mouse_genomes_project 4 41365168 41425151 + MGP_129S1SvImJ_P0065307 Atp8b5 protein_coding protein_coding MGP_129S1SvImJ_T0067483.1 MGP_129S1SvImJ_G0028696.1 mouse_genomes_project 4 120488843 120510519 - MGP_129S1SvImJ_P0067483 Ppih protein_coding protein_coding MGP_129S1SvImJ_T0067484.1 MGP_129S1SvImJ_G0028696.1 mouse_genomes_project 4 120488843 120510506 - MGP_129S1SvImJ_P0067484 Ppih protein_coding protein_coding MGP_129S1SvImJ_T0067485.1 MGP_129S1SvImJ_G0028696.1 mouse_genomes_project 4 120488843 120510568 - MGP_129S1SvImJ_P0067485 Ppih protein_coding protein_coding MGP_129S1SvImJ_T0067486.1 MGP_129S1SvImJ_G0028696.1 mouse_genomes_project 4 120496631 120510439 - MGP_129S1SvImJ_P0067486 Ppih protein_coding protein_coding MGP_129S1SvImJ_T0067487.1 MGP_129S1SvImJ_G0028696.1 mouse_genomes_project 4 120497206 120510506 - MGP_129S1SvImJ_P0067487 Ppih protein_coding protein_coding MGP_129S1SvImJ_T0067488.1 MGP_129S1SvImJ_G0028696.1 mouse_genomes_project 4 120501336 120510521 - MGP_129S1SvImJ_P0067488 Ppih protein_coding protein_coding MGP_129S1SvImJ_T0065095.1 MGP_129S1SvImJ_G0028153.1 mouse_genomes_project 4 38952862 38965717 - MGP_129S1SvImJ_P0065095 Aqp7 protein_coding protein_coding MGP_129S1SvImJ_T0065096.1 MGP_129S1SvImJ_G0028153.1 mouse_genomes_project 4 38952862 38968408 - MGP_129S1SvImJ_P0065096 Aqp7 protein_coding protein_coding MGP_129S1SvImJ_T0065097.1 MGP_129S1SvImJ_G0028153.1 mouse_genomes_project 4 38954597 38961506 - Aqp7 protein_coding processed_transcript MGP_129S1SvImJ_T0065098.1 MGP_129S1SvImJ_G0028153.1 mouse_genomes_project 4 38954839 38956016 - Aqp7 protein_coding processed_transcript MGP_129S1SvImJ_T0068614.1 MGP_129S1SvImJ_G0028950.1 mouse_genomes_project 4 138340841 138357268 + MGP_129S1SvImJ_P0068614 Srsf10 protein_coding protein_coding MGP_129S1SvImJ_T0068615.1 MGP_129S1SvImJ_G0028950.1 mouse_genomes_project 4 138340841 138354481 + MGP_129S1SvImJ_P0068615 Srsf10 protein_coding protein_coding MGP_129S1SvImJ_T0068616.1 MGP_129S1SvImJ_G0028950.1 mouse_genomes_project 4 138340972 138354481 + Srsf10 protein_coding processed_transcript MGP_129S1SvImJ_T0068617.1 MGP_129S1SvImJ_G0028950.1 mouse_genomes_project 4 138341206 138344084 + Srsf10 protein_coding processed_transcript MGP_129S1SvImJ_T0068618.1 MGP_129S1SvImJ_G0028950.1 mouse_genomes_project 4 138341226 138344514 + Srsf10 protein_coding processed_transcript MGP_129S1SvImJ_T0068619.1 MGP_129S1SvImJ_G0028950.1 mouse_genomes_project 4 138347066 138348902 + Srsf10 protein_coding processed_transcript MGP_129S1SvImJ_T0068620.1 MGP_129S1SvImJ_G0028950.1 mouse_genomes_project 4 138347098 138349053 + Srsf10 protein_coding processed_transcript MGP_129S1SvImJ_T0068621.1 MGP_129S1SvImJ_G0028950.1 mouse_genomes_project 4 138348533 138350691 + Srsf10 protein_coding processed_transcript MGP_129S1SvImJ_T0014427.1 MGP_129S1SvImJ_G0012516.1 mouse_genomes_project 4 10227061 10227499 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065824.1 MGP_129S1SvImJ_G0028317.1 mouse_genomes_project 4 56229949 56523201 + MGP_129S1SvImJ_P0065824 Palm2 protein_coding protein_coding MGP_129S1SvImJ_T0065825.1 MGP_129S1SvImJ_G0028317.1 mouse_genomes_project 4 56377183 56522987 + MGP_129S1SvImJ_P0065825 Palm2 protein_coding protein_coding MGP_129S1SvImJ_T0065827.1 MGP_129S1SvImJ_G0028317.1 mouse_genomes_project 4 56377344 56521448 + MGP_129S1SvImJ_P0065827 Palm2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0010643.1 MGP_129S1SvImJ_G0008759.1 mouse_genomes_project 4 131626768 131626840 - Mir7016 miRNA miRNA MGP_129S1SvImJ_T0014435.1 MGP_129S1SvImJ_G0012524.1 mouse_genomes_project 4 12493901 12494225 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101111.1 MGP_129S1SvImJ_G0039178.1 mouse_genomes_project 4 48792705 48792837 + Gm25485 snoRNA snoRNA MGP_129S1SvImJ_T0065308.1 MGP_129S1SvImJ_G0028203.1 mouse_genomes_project 4 41484974 41535949 + MGP_129S1SvImJ_P0065308 Rusc2 protein_coding protein_coding MGP_129S1SvImJ_T0065309.1 MGP_129S1SvImJ_G0028203.1 mouse_genomes_project 4 41485052 41523251 + MGP_129S1SvImJ_P0065309 Rusc2 protein_coding protein_coding MGP_129S1SvImJ_T0065310.1 MGP_129S1SvImJ_G0028203.1 mouse_genomes_project 4 41485065 41524645 + Rusc2 protein_coding processed_transcript MGP_129S1SvImJ_T0065311.1 MGP_129S1SvImJ_G0028203.1 mouse_genomes_project 4 41486456 41523295 + MGP_129S1SvImJ_P0065311 Rusc2 protein_coding protein_coding MGP_129S1SvImJ_T0065312.1 MGP_129S1SvImJ_G0028203.1 mouse_genomes_project 4 41486517 41523210 + MGP_129S1SvImJ_P0065312 Rusc2 protein_coding protein_coding MGP_129S1SvImJ_T0065313.1 MGP_129S1SvImJ_G0028203.1 mouse_genomes_project 4 41487286 41530780 + Rusc2 protein_coding processed_transcript MGP_129S1SvImJ_T0065314.1 MGP_129S1SvImJ_G0028203.1 mouse_genomes_project 4 41487339 41523348 + MGP_129S1SvImJ_P0065314 Rusc2 protein_coding protein_coding MGP_129S1SvImJ_T0065315.1 MGP_129S1SvImJ_G0028203.1 mouse_genomes_project 4 41504193 41535934 + Rusc2 protein_coding retained_intron MGP_129S1SvImJ_T0065316.1 MGP_129S1SvImJ_G0028203.1 mouse_genomes_project 4 41504208 41523194 + MGP_129S1SvImJ_P0065316 Rusc2 protein_coding protein_coding MGP_129S1SvImJ_T0065317.1 MGP_129S1SvImJ_G0028203.1 mouse_genomes_project 4 41509430 41535949 + MGP_129S1SvImJ_P0065317 Rusc2 protein_coding protein_coding MGP_129S1SvImJ_T0065318.1 MGP_129S1SvImJ_G0028203.1 mouse_genomes_project 4 41509497 41531316 + Rusc2 protein_coding processed_transcript MGP_129S1SvImJ_T0065319.1 MGP_129S1SvImJ_G0028203.1 mouse_genomes_project 4 41509552 41523634 + MGP_129S1SvImJ_P0065319 Rusc2 protein_coding protein_coding MGP_129S1SvImJ_T0065320.1 MGP_129S1SvImJ_G0028203.1 mouse_genomes_project 4 41523150 41535510 + MGP_129S1SvImJ_P0065320 Rusc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065321.1 MGP_129S1SvImJ_G0028203.1 mouse_genomes_project 4 41523174 41535510 + MGP_129S1SvImJ_P0065321 Rusc2 protein_coding protein_coding MGP_129S1SvImJ_T0065322.1 MGP_129S1SvImJ_G0028203.1 mouse_genomes_project 4 41524892 41535226 + Rusc2 protein_coding processed_transcript MGP_129S1SvImJ_T0065323.1 MGP_129S1SvImJ_G0028203.1 mouse_genomes_project 4 41531352 41533234 + Rusc2 protein_coding retained_intron MGP_129S1SvImJ_T0065324.1 MGP_129S1SvImJ_G0028203.1 mouse_genomes_project 4 41532451 41532872 + Rusc2 protein_coding retained_intron MGP_129S1SvImJ_T0014431.1 MGP_129S1SvImJ_G0012520.1 mouse_genomes_project 4 11567300 11567531 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102540.1 MGP_129S1SvImJ_G0040373.1 mouse_genomes_project 4 119744582 119745497 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102521.1 MGP_129S1SvImJ_G0040354.1 mouse_genomes_project 4 88449561 88451249 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0014727.1 MGP_129S1SvImJ_G0012816.1 mouse_genomes_project 4 109482522 109483078 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066293.1 MGP_129S1SvImJ_G0028435.1 mouse_genomes_project 4 88692612 88693185 + MGP_129S1SvImJ_P0066293 protein_coding protein_coding MGP_129S1SvImJ_T0067796.1 MGP_129S1SvImJ_G0028778.1 mouse_genomes_project 4 127990696 127996020 - Adprhl2 protein_coding processed_transcript MGP_129S1SvImJ_T0067797.1 MGP_129S1SvImJ_G0028778.1 mouse_genomes_project 4 127990696 127996354 - MGP_129S1SvImJ_P0067797 Adprhl2 protein_coding protein_coding MGP_129S1SvImJ_T0067798.1 MGP_129S1SvImJ_G0028778.1 mouse_genomes_project 4 127990701 127996118 - Adprhl2 protein_coding processed_transcript MGP_129S1SvImJ_T0067799.1 MGP_129S1SvImJ_G0028778.1 mouse_genomes_project 4 127992800 127996012 - Adprhl2 protein_coding processed_transcript MGP_129S1SvImJ_T0065129.1 MGP_129S1SvImJ_G0028161.1 mouse_genomes_project 4 39413763 39429537 + MGP_129S1SvImJ_P0065129 Nudt2 protein_coding protein_coding MGP_129S1SvImJ_T0099848.1 MGP_129S1SvImJ_G0037915.1 mouse_genomes_project 4 98546172 98546262 - Gm24960 snRNA snRNA MGP_129S1SvImJ_T0065216.1 MGP_129S1SvImJ_G0028189.1 mouse_genomes_project 4 40693748 40699425 - MGP_129S1SvImJ_P0065216 protein_coding protein_coding MGP_129S1SvImJ_T0067193.1 MGP_129S1SvImJ_G0028631.1 mouse_genomes_project 4 117598936 117601235 + Prdx1 protein_coding retained_intron MGP_129S1SvImJ_T0067194.1 MGP_129S1SvImJ_G0028631.1 mouse_genomes_project 4 117598936 117607180 + MGP_129S1SvImJ_P0067194 Prdx1 protein_coding protein_coding MGP_129S1SvImJ_T0067195.1 MGP_129S1SvImJ_G0028631.1 mouse_genomes_project 4 117599198 117606330 + MGP_129S1SvImJ_P0067195 Prdx1 protein_coding protein_coding MGP_129S1SvImJ_T0067196.1 MGP_129S1SvImJ_G0028631.1 mouse_genomes_project 4 117599224 117612610 + MGP_129S1SvImJ_P0067196 Prdx1 protein_coding protein_coding MGP_129S1SvImJ_T0067197.1 MGP_129S1SvImJ_G0028631.1 mouse_genomes_project 4 117600649 117612524 + MGP_129S1SvImJ_P0067197 Prdx1 protein_coding protein_coding MGP_129S1SvImJ_T0064550.1 MGP_129S1SvImJ_G0028021.1 mouse_genomes_project 4 12226 38536 - MGP_129S1SvImJ_P0064550 Tmem68 protein_coding protein_coding MGP_129S1SvImJ_T0064551.1 MGP_129S1SvImJ_G0028021.1 mouse_genomes_project 4 12226 38492 - MGP_129S1SvImJ_P0064551 Tmem68 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064552.1 MGP_129S1SvImJ_G0028021.1 mouse_genomes_project 4 13513 15905 - Tmem68 protein_coding retained_intron MGP_129S1SvImJ_T0064553.1 MGP_129S1SvImJ_G0028021.1 mouse_genomes_project 4 32279 38487 - Tmem68 protein_coding retained_intron MGP_129S1SvImJ_T0064554.1 MGP_129S1SvImJ_G0028021.1 mouse_genomes_project 4 32298 38487 - Tmem68 protein_coding processed_transcript MGP_129S1SvImJ_T0064555.1 MGP_129S1SvImJ_G0028021.1 mouse_genomes_project 4 32473 37416 - MGP_129S1SvImJ_P0064555 Tmem68 protein_coding protein_coding MGP_129S1SvImJ_T0068733.1 MGP_129S1SvImJ_G0028980.1 mouse_genomes_project 4 140025690 140034597 - MGP_129S1SvImJ_P0068733 protein_coding protein_coding MGP_129S1SvImJ_T0068506.1 MGP_129S1SvImJ_G0028925.1 mouse_genomes_project 4 136712390 136728665 - MGP_129S1SvImJ_P0068506 Extl1 protein_coding protein_coding MGP_129S1SvImJ_T0068507.1 MGP_129S1SvImJ_G0028925.1 mouse_genomes_project 4 136716651 136740693 - Extl1 protein_coding processed_transcript MGP_129S1SvImJ_T0068508.1 MGP_129S1SvImJ_G0028925.1 mouse_genomes_project 4 136718818 136721533 - Extl1 protein_coding processed_transcript MGP_129S1SvImJ_T0069060.1 MGP_129S1SvImJ_G0029054.1 mouse_genomes_project 4 144767618 144814889 - MGP_129S1SvImJ_P0069060 protein_coding protein_coding MGP_129S1SvImJ_T0069061.1 MGP_129S1SvImJ_G0029054.1 mouse_genomes_project 4 144773663 144814889 - MGP_129S1SvImJ_P0069061 protein_coding protein_coding MGP_129S1SvImJ_T0004483.1 MGP_129S1SvImJ_G0003909.1 mouse_genomes_project 4 71379046 71379728 + Gm11250 antisense antisense MGP_129S1SvImJ_T0065205.1 MGP_129S1SvImJ_G0028184.1 mouse_genomes_project 4 40261445 40262562 + MGP_129S1SvImJ_P0065205 protein_coding protein_coding MGP_129S1SvImJ_T0102512.1 MGP_129S1SvImJ_G0040346.1 mouse_genomes_project 4 214337 234229 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0066044.1 MGP_129S1SvImJ_G0028380.1 mouse_genomes_project 4 67947708 68100779 - MGP_129S1SvImJ_P0066044 Brinp1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0066045.1 MGP_129S1SvImJ_G0028380.1 mouse_genomes_project 4 67984113 68030799 - Brinp1 protein_coding processed_transcript MGP_129S1SvImJ_T0066046.1 MGP_129S1SvImJ_G0028380.1 mouse_genomes_project 4 68016913 68019687 - Brinp1 protein_coding processed_transcript MGP_129S1SvImJ_T0067825.1 MGP_129S1SvImJ_G0028784.1 mouse_genomes_project 4 128311641 128316073 + MGP_129S1SvImJ_P0067825 5730409E04Rik protein_coding protein_coding MGP_129S1SvImJ_T0067826.1 MGP_129S1SvImJ_G0028784.1 mouse_genomes_project 4 128311677 128316073 + MGP_129S1SvImJ_P0067826 5730409E04Rik protein_coding protein_coding MGP_129S1SvImJ_T0014625.1 MGP_129S1SvImJ_G0012714.1 mouse_genomes_project 4 74396706 74397021 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014723.1 MGP_129S1SvImJ_G0012812.1 mouse_genomes_project 4 109031502 109032298 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069756.1 MGP_129S1SvImJ_G0029213.1 mouse_genomes_project 4 159733383 159741780 + protein_coding retained_intron MGP_129S1SvImJ_T0069757.1 MGP_129S1SvImJ_G0029213.1 mouse_genomes_project 4 159733451 159773340 + protein_coding processed_transcript MGP_129S1SvImJ_T0069758.1 MGP_129S1SvImJ_G0029213.1 mouse_genomes_project 4 159733451 159748050 + MGP_129S1SvImJ_P0069758 protein_coding protein_coding MGP_129S1SvImJ_T0069759.1 MGP_129S1SvImJ_G0029213.1 mouse_genomes_project 4 159733451 159799578 + MGP_129S1SvImJ_P0069759 protein_coding protein_coding MGP_129S1SvImJ_T0069760.1 MGP_129S1SvImJ_G0029213.1 mouse_genomes_project 4 159733527 159799587 + MGP_129S1SvImJ_P0069760 protein_coding protein_coding MGP_129S1SvImJ_T0069761.1 MGP_129S1SvImJ_G0029213.1 mouse_genomes_project 4 159747988 159780194 + protein_coding retained_intron MGP_129S1SvImJ_T0069762.1 MGP_129S1SvImJ_G0029213.1 mouse_genomes_project 4 159755922 159780027 + protein_coding processed_transcript MGP_129S1SvImJ_T0069763.1 MGP_129S1SvImJ_G0029213.1 mouse_genomes_project 4 159784360 159799160 + protein_coding retained_intron MGP_129S1SvImJ_T0069764.1 MGP_129S1SvImJ_G0029213.1 mouse_genomes_project 4 159794644 159799285 + protein_coding retained_intron MGP_129S1SvImJ_T0069765.1 MGP_129S1SvImJ_G0029213.1 mouse_genomes_project 4 159794691 159799235 + protein_coding retained_intron MGP_129S1SvImJ_T0066622.1 MGP_129S1SvImJ_G0028514.1 mouse_genomes_project 4 105556437 105632520 - MGP_129S1SvImJ_P0066622 Prkaa2 protein_coding protein_coding MGP_129S1SvImJ_T0014826.1 MGP_129S1SvImJ_G0012915.1 mouse_genomes_project 4 141969407 141970016 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014832.1 MGP_129S1SvImJ_G0012921.1 mouse_genomes_project 4 146357731 146359957 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064967.1 MGP_129S1SvImJ_G0028123.1 mouse_genomes_project 4 30826740 31026678 + MGP_129S1SvImJ_P0064967 Rngtt protein_coding protein_coding MGP_129S1SvImJ_T0064968.1 MGP_129S1SvImJ_G0028123.1 mouse_genomes_project 4 30826757 31024978 + MGP_129S1SvImJ_P0064968 Rngtt protein_coding protein_coding MGP_129S1SvImJ_T0064969.1 MGP_129S1SvImJ_G0028123.1 mouse_genomes_project 4 30838507 30842310 + Rngtt protein_coding processed_transcript MGP_129S1SvImJ_T0064970.1 MGP_129S1SvImJ_G0028123.1 mouse_genomes_project 4 30841169 30855415 + Rngtt protein_coding processed_transcript MGP_129S1SvImJ_T0064971.1 MGP_129S1SvImJ_G0028123.1 mouse_genomes_project 4 30847271 30875675 + Rngtt protein_coding processed_transcript MGP_129S1SvImJ_T0101102.1 MGP_129S1SvImJ_G0039169.1 mouse_genomes_project 4 38326638 38326733 - Gm23338 snoRNA snoRNA MGP_129S1SvImJ_T0065148.1 MGP_129S1SvImJ_G0028166.1 mouse_genomes_project 4 39594169 39596350 - MGP_129S1SvImJ_P0065148 Enho protein_coding protein_coding MGP_129S1SvImJ_T0014575.1 MGP_129S1SvImJ_G0012664.1 mouse_genomes_project 4 53339246 53339814 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069631.1 MGP_129S1SvImJ_G0029190.1 mouse_genomes_project 4 158260929 158286419 - MGP_129S1SvImJ_P0069631 Ccdc27 protein_coding protein_coding MGP_129S1SvImJ_T0069124.1 MGP_129S1SvImJ_G0029079.1 mouse_genomes_project 4 147192282 147199867 - MGP_129S1SvImJ_P0069124 protein_coding protein_coding MGP_129S1SvImJ_T0068725.1 MGP_129S1SvImJ_G0028975.1 mouse_genomes_project 4 139488897 139491784 - MGP_129S1SvImJ_P0068725 C1qa protein_coding protein_coding MGP_129S1SvImJ_T0007990.1 MGP_129S1SvImJ_G0006526.1 mouse_genomes_project 4 133788136 133805335 - Gm16080 lincRNA lincRNA MGP_129S1SvImJ_T0004538.1 MGP_129S1SvImJ_G0003947.1 mouse_genomes_project 4 120309431 120310141 - Gm12867 antisense antisense MGP_129S1SvImJ_T0069125.1 MGP_129S1SvImJ_G0029080.1 mouse_genomes_project 4 147293158 147296397 - MGP_129S1SvImJ_P0069125 protein_coding protein_coding MGP_129S1SvImJ_T0004579.1 MGP_129S1SvImJ_G0003979.1 mouse_genomes_project 4 140845673 140846597 - 1700095J12Rik antisense antisense MGP_129S1SvImJ_T0014857.1 MGP_129S1SvImJ_G0012946.1 mouse_genomes_project 4 158479498 158479971 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065067.1 MGP_129S1SvImJ_G0028146.1 mouse_genomes_project 4 38610759 38612405 + Dnaja1 protein_coding processed_transcript MGP_129S1SvImJ_T0065068.1 MGP_129S1SvImJ_G0028146.1 mouse_genomes_project 4 38611168 38618806 + Dnaja1 protein_coding processed_transcript MGP_129S1SvImJ_T0065069.1 MGP_129S1SvImJ_G0028146.1 mouse_genomes_project 4 38611531 38622220 + Dnaja1 protein_coding processed_transcript MGP_129S1SvImJ_T0065070.1 MGP_129S1SvImJ_G0028146.1 mouse_genomes_project 4 38611531 38625943 + MGP_129S1SvImJ_P0065070 Dnaja1 protein_coding protein_coding MGP_129S1SvImJ_T0065071.1 MGP_129S1SvImJ_G0028146.1 mouse_genomes_project 4 38611539 38620372 + MGP_129S1SvImJ_P0065071 Dnaja1 protein_coding protein_coding MGP_129S1SvImJ_T0065072.1 MGP_129S1SvImJ_G0028146.1 mouse_genomes_project 4 38611554 38616777 + MGP_129S1SvImJ_P0065072 Dnaja1 protein_coding protein_coding MGP_129S1SvImJ_T0065073.1 MGP_129S1SvImJ_G0028146.1 mouse_genomes_project 4 38611726 38614790 + MGP_129S1SvImJ_P0065073 Dnaja1 protein_coding protein_coding MGP_129S1SvImJ_T0065074.1 MGP_129S1SvImJ_G0028146.1 mouse_genomes_project 4 38611971 38612721 + Dnaja1 protein_coding processed_transcript MGP_129S1SvImJ_T0065075.1 MGP_129S1SvImJ_G0028146.1 mouse_genomes_project 4 38612658 38620876 + Dnaja1 protein_coding processed_transcript MGP_129S1SvImJ_T0064959.1 MGP_129S1SvImJ_G0028119.1 mouse_genomes_project 4 30633846 30668612 + MGP_129S1SvImJ_P0064959 Gabrr1 protein_coding protein_coding MGP_129S1SvImJ_T0014446.1 MGP_129S1SvImJ_G0012535.1 mouse_genomes_project 4 13982224 13982703 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069647.1 MGP_129S1SvImJ_G0029194.1 mouse_genomes_project 4 158424183 158537276 + MGP_129S1SvImJ_P0069647 Megf6 protein_coding protein_coding MGP_129S1SvImJ_T0069648.1 MGP_129S1SvImJ_G0029194.1 mouse_genomes_project 4 158496537 158533302 + MGP_129S1SvImJ_P0069648 Megf6 protein_coding protein_coding MGP_129S1SvImJ_T0069649.1 MGP_129S1SvImJ_G0029194.1 mouse_genomes_project 4 158508393 158511316 + Megf6 protein_coding retained_intron MGP_129S1SvImJ_T0069650.1 MGP_129S1SvImJ_G0029194.1 mouse_genomes_project 4 158526189 158536747 + Megf6 protein_coding processed_transcript MGP_129S1SvImJ_T0069651.1 MGP_129S1SvImJ_G0029194.1 mouse_genomes_project 4 158527745 158532105 + MGP_129S1SvImJ_P0069651 Megf6 protein_coding protein_coding MGP_129S1SvImJ_T0069652.1 MGP_129S1SvImJ_G0029194.1 mouse_genomes_project 4 158531360 158535691 + Megf6 protein_coding retained_intron MGP_129S1SvImJ_T0069653.1 MGP_129S1SvImJ_G0029194.1 mouse_genomes_project 4 158531455 158532611 + Megf6 protein_coding retained_intron MGP_129S1SvImJ_T0018152.1 MGP_129S1SvImJ_G0015588.1 mouse_genomes_project 4 160423982 160431085 - Gm13648 processed_transcript processed_transcript MGP_129S1SvImJ_T0066352.1 MGP_129S1SvImJ_G0028456.1 mouse_genomes_project 4 95099974 95103163 - MGP_129S1SvImJ_P0066352 Jun protein_coding protein_coding MGP_129S1SvImJ_T0018140.1 MGP_129S1SvImJ_G0015580.1 mouse_genomes_project 4 136333169 136337386 + processed_transcript processed_transcript MGP_129S1SvImJ_T0014408.1 MGP_129S1SvImJ_G0012497.1 mouse_genomes_project 4 3063985 3064731 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069167.1 MGP_129S1SvImJ_G0029103.1 mouse_genomes_project 4 148654775 148704593 - MGP_129S1SvImJ_P0069167 Tnfrsf8 protein_coding protein_coding MGP_129S1SvImJ_T0069168.1 MGP_129S1SvImJ_G0029103.1 mouse_genomes_project 4 148654777 148704610 - MGP_129S1SvImJ_P0069168 Tnfrsf8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064901.1 MGP_129S1SvImJ_G0028107.1 mouse_genomes_project 4 26101050 26264302 + MGP_129S1SvImJ_P0064901 Epha7 protein_coding protein_coding MGP_129S1SvImJ_T0064902.1 MGP_129S1SvImJ_G0028107.1 mouse_genomes_project 4 26101050 26243052 + MGP_129S1SvImJ_P0064902 Epha7 protein_coding protein_coding MGP_129S1SvImJ_T0064903.1 MGP_129S1SvImJ_G0028107.1 mouse_genomes_project 4 26101071 26263618 + MGP_129S1SvImJ_P0064903 Epha7 protein_coding protein_coding MGP_129S1SvImJ_T0064904.1 MGP_129S1SvImJ_G0028107.1 mouse_genomes_project 4 26101169 26264302 + MGP_129S1SvImJ_P0064904 Epha7 protein_coding protein_coding MGP_129S1SvImJ_T0064905.1 MGP_129S1SvImJ_G0028107.1 mouse_genomes_project 4 26101245 26162010 + Epha7 protein_coding processed_transcript MGP_129S1SvImJ_T0064906.1 MGP_129S1SvImJ_G0028107.1 mouse_genomes_project 4 26103348 26109077 + Epha7 protein_coding processed_transcript MGP_129S1SvImJ_T0064907.1 MGP_129S1SvImJ_G0028107.1 mouse_genomes_project 4 26160049 26239505 + Epha7 protein_coding processed_transcript MGP_129S1SvImJ_T0064908.1 MGP_129S1SvImJ_G0028107.1 mouse_genomes_project 4 26160132 26242339 + Epha7 protein_coding processed_transcript MGP_129S1SvImJ_T0011582.1 MGP_129S1SvImJ_G0009698.1 mouse_genomes_project 4 42038380 42038457 + Gm27265 misc_RNA misc_RNA MGP_129S1SvImJ_T0008032.1 MGP_129S1SvImJ_G0006558.1 mouse_genomes_project 4 152469854 152472739 + Gm13203 lincRNA lincRNA MGP_129S1SvImJ_T0067678.1 MGP_129S1SvImJ_G0028747.1 mouse_genomes_project 4 125403121 125403640 - MGP_129S1SvImJ_P0067678 4930535I16Rik protein_coding protein_coding MGP_129S1SvImJ_T0018104.1 MGP_129S1SvImJ_G0015562.1 mouse_genomes_project 4 97880842 97884039 - Gm12676 processed_transcript processed_transcript MGP_129S1SvImJ_T0065399.1 MGP_129S1SvImJ_G0028215.1 mouse_genomes_project 4 41700447 41713493 + MGP_129S1SvImJ_P0065399 Rgp1 protein_coding protein_coding MGP_129S1SvImJ_T0065400.1 MGP_129S1SvImJ_G0028215.1 mouse_genomes_project 4 41700467 41713491 + MGP_129S1SvImJ_P0065400 Rgp1 protein_coding protein_coding MGP_129S1SvImJ_T0065401.1 MGP_129S1SvImJ_G0028215.1 mouse_genomes_project 4 41700686 41706879 + Rgp1 protein_coding processed_transcript MGP_129S1SvImJ_T0065402.1 MGP_129S1SvImJ_G0028215.1 mouse_genomes_project 4 41700690 41709086 + MGP_129S1SvImJ_P0065402 Rgp1 protein_coding protein_coding MGP_129S1SvImJ_T0065403.1 MGP_129S1SvImJ_G0028215.1 mouse_genomes_project 4 41700715 41705582 + Rgp1 protein_coding retained_intron MGP_129S1SvImJ_T0065404.1 MGP_129S1SvImJ_G0028215.1 mouse_genomes_project 4 41705696 41706875 + Rgp1 protein_coding retained_intron MGP_129S1SvImJ_T0065405.1 MGP_129S1SvImJ_G0028215.1 mouse_genomes_project 4 41707169 41707676 + Rgp1 protein_coding retained_intron MGP_129S1SvImJ_T0067723.1 MGP_129S1SvImJ_G0028761.1 mouse_genomes_project 4 126593255 126615319 + MGP_129S1SvImJ_P0067723 Gnl2 protein_coding protein_coding MGP_129S1SvImJ_T0067724.1 MGP_129S1SvImJ_G0028761.1 mouse_genomes_project 4 126606546 126635451 + MGP_129S1SvImJ_P0067724 Gnl2 protein_coding protein_coding MGP_129S1SvImJ_T0067725.1 MGP_129S1SvImJ_G0028761.1 mouse_genomes_project 4 126606612 126618977 + Gnl2 protein_coding processed_transcript MGP_129S1SvImJ_T0067726.1 MGP_129S1SvImJ_G0028761.1 mouse_genomes_project 4 126618690 126620653 + Gnl2 protein_coding processed_transcript MGP_129S1SvImJ_T0067727.1 MGP_129S1SvImJ_G0028761.1 mouse_genomes_project 4 126620964 126623997 + Gnl2 protein_coding processed_transcript MGP_129S1SvImJ_T0067728.1 MGP_129S1SvImJ_G0028761.1 mouse_genomes_project 4 126633225 126635455 + Gnl2 protein_coding processed_transcript MGP_129S1SvImJ_T0014407.1 MGP_129S1SvImJ_G0012496.1 mouse_genomes_project 4 3027771 3028215 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014400.1 MGP_129S1SvImJ_G0012489.1 mouse_genomes_project 4 472482 472982 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004527.1 MGP_129S1SvImJ_G0003937.1 mouse_genomes_project 4 116722604 116722864 - Gm29434 antisense antisense MGP_129S1SvImJ_T0014459.1 MGP_129S1SvImJ_G0012548.1 mouse_genomes_project 4 18687206 18687475 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067435.1 MGP_129S1SvImJ_G0028685.1 mouse_genomes_project 4 120068353 120073299 - MGP_129S1SvImJ_P0067435 protein_coding protein_coding MGP_129S1SvImJ_T0065923.1 MGP_129S1SvImJ_G0028347.1 mouse_genomes_project 4 61264092 61274678 + MGP_129S1SvImJ_P0065923 Slc31a2 protein_coding protein_coding MGP_129S1SvImJ_T0007912.1 MGP_129S1SvImJ_G0006472.1 mouse_genomes_project 4 99916347 99917724 - Gm12688 lincRNA lincRNA MGP_129S1SvImJ_T0067388.1 MGP_129S1SvImJ_G0028666.1 mouse_genomes_project 4 119466441 119472870 + MGP_129S1SvImJ_P0067388 Med8 protein_coding protein_coding MGP_129S1SvImJ_T0067389.1 MGP_129S1SvImJ_G0028666.1 mouse_genomes_project 4 119466441 119472204 + MGP_129S1SvImJ_P0067389 Med8 protein_coding protein_coding MGP_129S1SvImJ_T0067390.1 MGP_129S1SvImJ_G0028666.1 mouse_genomes_project 4 119466459 119472202 + MGP_129S1SvImJ_P0067390 Med8 protein_coding protein_coding MGP_129S1SvImJ_T0067391.1 MGP_129S1SvImJ_G0028666.1 mouse_genomes_project 4 119466460 119470928 + Med8 protein_coding processed_transcript MGP_129S1SvImJ_T0067392.1 MGP_129S1SvImJ_G0028666.1 mouse_genomes_project 4 119466485 119472205 + MGP_129S1SvImJ_P0067392 Med8 protein_coding protein_coding MGP_129S1SvImJ_T0067393.1 MGP_129S1SvImJ_G0028666.1 mouse_genomes_project 4 119467452 119468897 + Med8 protein_coding processed_transcript MGP_129S1SvImJ_T0067394.1 MGP_129S1SvImJ_G0028666.1 mouse_genomes_project 4 119468537 119469618 + Med8 protein_coding processed_transcript MGP_129S1SvImJ_T0067395.1 MGP_129S1SvImJ_G0028666.1 mouse_genomes_project 4 119468728 119471138 + Med8 protein_coding processed_transcript MGP_129S1SvImJ_T0101108.1 MGP_129S1SvImJ_G0039175.1 mouse_genomes_project 4 44815058 44815189 + Gm22247 snoRNA snoRNA MGP_129S1SvImJ_T0064923.1 MGP_129S1SvImJ_G0028110.1 mouse_genomes_project 4 30058026 30060139 - MGP_129S1SvImJ_P0064923 Gja10 protein_coding protein_coding MGP_129S1SvImJ_T0008013.1 MGP_129S1SvImJ_G0006540.1 mouse_genomes_project 4 140002187 140003304 - 2810405F17Rik lincRNA lincRNA MGP_129S1SvImJ_T0014451.1 MGP_129S1SvImJ_G0012540.1 mouse_genomes_project 4 15463521 15465631 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065954.1 MGP_129S1SvImJ_G0028356.1 mouse_genomes_project 4 61492021 61504281 - Alad protein_coding processed_transcript MGP_129S1SvImJ_T0065955.1 MGP_129S1SvImJ_G0028356.1 mouse_genomes_project 4 61492021 61504318 - MGP_129S1SvImJ_P0065955 Alad protein_coding protein_coding MGP_129S1SvImJ_T0065956.1 MGP_129S1SvImJ_G0028356.1 mouse_genomes_project 4 61492021 61504294 - MGP_129S1SvImJ_P0065956 Alad protein_coding protein_coding MGP_129S1SvImJ_T0067427.1 MGP_129S1SvImJ_G0028679.1 mouse_genomes_project 4 119801701 119802649 + MGP_129S1SvImJ_P0067427 Olfr1339 protein_coding protein_coding MGP_129S1SvImJ_T0068340.1 MGP_129S1SvImJ_G0028887.1 mouse_genomes_project 4 135444229 135446747 - MGP_129S1SvImJ_P0068340 Gpr3 protein_coding protein_coding MGP_129S1SvImJ_T0068341.1 MGP_129S1SvImJ_G0028887.1 mouse_genomes_project 4 135445256 135447425 - MGP_129S1SvImJ_P0068341 Gpr3 protein_coding protein_coding MGP_129S1SvImJ_T0068342.1 MGP_129S1SvImJ_G0028887.1 mouse_genomes_project 4 135445959 135447203 - MGP_129S1SvImJ_P0068342 Gpr3 protein_coding protein_coding MGP_129S1SvImJ_T0001443.1 MGP_129S1SvImJ_G0001365.1 mouse_genomes_project 4 134229537 134234078 - TEC TEC MGP_129S1SvImJ_T0065784.1 MGP_129S1SvImJ_G0028309.1 mouse_genomes_project 4 55503393 55504906 + MGP_129S1SvImJ_P0065784 Actl7a protein_coding protein_coding MGP_129S1SvImJ_T0069068.1 MGP_129S1SvImJ_G0029058.1 mouse_genomes_project 4 144897949 144902422 + Casp9 protein_coding processed_transcript MGP_129S1SvImJ_T0069069.1 MGP_129S1SvImJ_G0029058.1 mouse_genomes_project 4 144898047 144909787 + MGP_129S1SvImJ_P0069069 Casp9 protein_coding protein_coding MGP_129S1SvImJ_T0069070.1 MGP_129S1SvImJ_G0029058.1 mouse_genomes_project 4 144898181 144900910 + Casp9 protein_coding processed_transcript MGP_129S1SvImJ_T0069071.1 MGP_129S1SvImJ_G0029058.1 mouse_genomes_project 4 144898192 144920323 + MGP_129S1SvImJ_P0069071 Casp9 protein_coding protein_coding MGP_129S1SvImJ_T0069072.1 MGP_129S1SvImJ_G0029058.1 mouse_genomes_project 4 144919102 144920321 + Casp9 protein_coding processed_transcript MGP_129S1SvImJ_T0065569.1 MGP_129S1SvImJ_G0028249.1 mouse_genomes_project 4 44155965 44175251 + Ccdc180 protein_coding processed_transcript MGP_129S1SvImJ_T0065570.1 MGP_129S1SvImJ_G0028249.1 mouse_genomes_project 4 44155965 44221277 + MGP_129S1SvImJ_P0065570 Ccdc180 protein_coding protein_coding MGP_129S1SvImJ_T0065571.1 MGP_129S1SvImJ_G0028249.1 mouse_genomes_project 4 44156514 44221270 + MGP_129S1SvImJ_P0065571 Ccdc180 protein_coding protein_coding MGP_129S1SvImJ_T0065572.1 MGP_129S1SvImJ_G0028249.1 mouse_genomes_project 4 44182042 44189610 + MGP_129S1SvImJ_P0065572 Ccdc180 protein_coding protein_coding MGP_129S1SvImJ_T0007920.1 MGP_129S1SvImJ_G0006478.1 mouse_genomes_project 4 101714484 101719158 + Gm12798 lincRNA lincRNA MGP_129S1SvImJ_T0065532.1 MGP_129S1SvImJ_G0028240.1 mouse_genomes_project 4 43241843 43294131 - MGP_129S1SvImJ_P0065532 Fbxo10 protein_coding protein_coding MGP_129S1SvImJ_T0065533.1 MGP_129S1SvImJ_G0028240.1 mouse_genomes_project 4 43241844 43270510 - MGP_129S1SvImJ_P0065533 Fbxo10 protein_coding protein_coding MGP_129S1SvImJ_T0065534.1 MGP_129S1SvImJ_G0028240.1 mouse_genomes_project 4 43254793 43267124 - Fbxo10 protein_coding processed_transcript MGP_129S1SvImJ_T0001445.1 MGP_129S1SvImJ_G0001367.1 mouse_genomes_project 4 139221947 139224434 + TEC TEC MGP_129S1SvImJ_T0069241.1 MGP_129S1SvImJ_G0029123.1 mouse_genomes_project 4 152153140 152165485 - MGP_129S1SvImJ_P0069241 Ubiad1 protein_coding protein_coding MGP_129S1SvImJ_T0069242.1 MGP_129S1SvImJ_G0029123.1 mouse_genomes_project 4 152155135 152165475 - Ubiad1 protein_coding processed_transcript MGP_129S1SvImJ_T0069062.1 MGP_129S1SvImJ_G0029055.1 mouse_genomes_project 4 144773949 144775698 - MGP_129S1SvImJ_P0069062 protein_coding protein_coding MGP_129S1SvImJ_T0065560.1 MGP_129S1SvImJ_G0028246.1 mouse_genomes_project 4 44053814 44059385 + MGP_129S1SvImJ_P0065560 Aldh1b1 protein_coding protein_coding MGP_129S1SvImJ_T0065561.1 MGP_129S1SvImJ_G0028246.1 mouse_genomes_project 4 44053913 44057639 + MGP_129S1SvImJ_P0065561 Aldh1b1 protein_coding protein_coding MGP_129S1SvImJ_T0069940.1 MGP_129S1SvImJ_G0029249.1 mouse_genomes_project 4 160572911 160574767 + MGP_129S1SvImJ_P0069940 AW011738 protein_coding protein_coding MGP_129S1SvImJ_T0010584.1 MGP_129S1SvImJ_G0008700.1 mouse_genomes_project 4 7501300 7501407 + n-TSaga9 miRNA miRNA MGP_129S1SvImJ_T0007805.1 MGP_129S1SvImJ_G0006382.1 mouse_genomes_project 4 5892383 5894976 - Gm26548 lincRNA lincRNA MGP_129S1SvImJ_T0068402.1 MGP_129S1SvImJ_G0028905.1 mouse_genomes_project 4 136147836 136190625 - MGP_129S1SvImJ_P0068402 Rps6ka1 protein_coding protein_coding MGP_129S1SvImJ_T0068403.1 MGP_129S1SvImJ_G0028905.1 mouse_genomes_project 4 136147845 136190777 - MGP_129S1SvImJ_P0068403 Rps6ka1 protein_coding protein_coding MGP_129S1SvImJ_T0068404.1 MGP_129S1SvImJ_G0028905.1 mouse_genomes_project 4 136147845 136177736 - MGP_129S1SvImJ_P0068404 Rps6ka1 protein_coding protein_coding MGP_129S1SvImJ_T0068405.1 MGP_129S1SvImJ_G0028905.1 mouse_genomes_project 4 136148367 136175314 - MGP_129S1SvImJ_P0068405 Rps6ka1 protein_coding protein_coding MGP_129S1SvImJ_T0068406.1 MGP_129S1SvImJ_G0028905.1 mouse_genomes_project 4 136148599 136176036 - MGP_129S1SvImJ_P0068406 Rps6ka1 protein_coding protein_coding MGP_129S1SvImJ_T0068407.1 MGP_129S1SvImJ_G0028905.1 mouse_genomes_project 4 136153848 136163795 - Rps6ka1 protein_coding retained_intron MGP_129S1SvImJ_T0068408.1 MGP_129S1SvImJ_G0028905.1 mouse_genomes_project 4 136163032 136163907 - Rps6ka1 protein_coding retained_intron MGP_129S1SvImJ_T0068409.1 MGP_129S1SvImJ_G0028905.1 mouse_genomes_project 4 136174964 136190567 - Rps6ka1 protein_coding processed_transcript MGP_129S1SvImJ_T0004467.1 MGP_129S1SvImJ_G0003895.1 mouse_genomes_project 4 43175642 43184604 - Gm12679 antisense antisense MGP_129S1SvImJ_T0004575.1 MGP_129S1SvImJ_G0003977.1 mouse_genomes_project 4 140356601 140368480 - Rap1gapos antisense antisense MGP_129S1SvImJ_T0068570.1 MGP_129S1SvImJ_G0028941.1 mouse_genomes_project 4 137751285 137785119 - MGP_129S1SvImJ_P0068570 Srrm1 protein_coding protein_coding MGP_129S1SvImJ_T0068571.1 MGP_129S1SvImJ_G0028941.1 mouse_genomes_project 4 137751292 137785042 - MGP_129S1SvImJ_P0068571 Srrm1 protein_coding protein_coding MGP_129S1SvImJ_T0068572.1 MGP_129S1SvImJ_G0028941.1 mouse_genomes_project 4 137751895 137785042 - MGP_129S1SvImJ_P0068572 Srrm1 protein_coding protein_coding MGP_129S1SvImJ_T0068573.1 MGP_129S1SvImJ_G0028941.1 mouse_genomes_project 4 137752834 137784934 - MGP_129S1SvImJ_P0068573 Srrm1 protein_coding protein_coding MGP_129S1SvImJ_T0068574.1 MGP_129S1SvImJ_G0028941.1 mouse_genomes_project 4 137753091 137757998 - MGP_129S1SvImJ_P0068574 Srrm1 protein_coding protein_coding MGP_129S1SvImJ_T0068575.1 MGP_129S1SvImJ_G0028941.1 mouse_genomes_project 4 137753277 137784932 - Srrm1 protein_coding retained_intron MGP_129S1SvImJ_T0068576.1 MGP_129S1SvImJ_G0028941.1 mouse_genomes_project 4 137754567 137755649 - Srrm1 protein_coding retained_intron MGP_129S1SvImJ_T0068577.1 MGP_129S1SvImJ_G0028941.1 mouse_genomes_project 4 137759944 137763023 - Srrm1 protein_coding retained_intron MGP_129S1SvImJ_T0068578.1 MGP_129S1SvImJ_G0028941.1 mouse_genomes_project 4 137762253 137769918 - Srrm1 protein_coding retained_intron MGP_129S1SvImJ_T0068579.1 MGP_129S1SvImJ_G0028941.1 mouse_genomes_project 4 137762947 137774306 - MGP_129S1SvImJ_P0068579 Srrm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068580.1 MGP_129S1SvImJ_G0028941.1 mouse_genomes_project 4 137770113 137774362 - Srrm1 protein_coding retained_intron MGP_129S1SvImJ_T0068581.1 MGP_129S1SvImJ_G0028941.1 mouse_genomes_project 4 137774254 137784940 - MGP_129S1SvImJ_P0068581 Srrm1 protein_coding protein_coding MGP_129S1SvImJ_T0068582.1 MGP_129S1SvImJ_G0028941.1 mouse_genomes_project 4 137775477 137784949 - Srrm1 protein_coding retained_intron MGP_129S1SvImJ_T0068583.1 MGP_129S1SvImJ_G0028941.1 mouse_genomes_project 4 137776368 137779036 - MGP_129S1SvImJ_P0068583 Srrm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068584.1 MGP_129S1SvImJ_G0028941.1 mouse_genomes_project 4 137777523 137785000 - Srrm1 protein_coding processed_transcript MGP_129S1SvImJ_T0014669.1 MGP_129S1SvImJ_G0012758.1 mouse_genomes_project 4 90853838 90854333 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018093.1 MGP_129S1SvImJ_G0015554.1 mouse_genomes_project 4 89038472 89065978 - Gm12602 processed_transcript processed_transcript MGP_129S1SvImJ_T0018094.1 MGP_129S1SvImJ_G0015554.1 mouse_genomes_project 4 89061665 89065933 - Gm12602 processed_transcript processed_transcript MGP_129S1SvImJ_T0014555.1 MGP_129S1SvImJ_G0012644.1 mouse_genomes_project 4 47787827 47788158 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065084.1 MGP_129S1SvImJ_G0028150.1 mouse_genomes_project 4 38847073 38858961 - MGP_129S1SvImJ_P0065084 Bag1 protein_coding protein_coding MGP_129S1SvImJ_T0065085.1 MGP_129S1SvImJ_G0028150.1 mouse_genomes_project 4 38847074 38858974 - MGP_129S1SvImJ_P0065085 Bag1 protein_coding protein_coding MGP_129S1SvImJ_T0065086.1 MGP_129S1SvImJ_G0028150.1 mouse_genomes_project 4 38847076 38858923 - MGP_129S1SvImJ_P0065086 Bag1 protein_coding protein_coding MGP_129S1SvImJ_T0066633.1 MGP_129S1SvImJ_G0028520.1 mouse_genomes_project 4 107186103 107217307 + MGP_129S1SvImJ_P0066633 Dhcr24 protein_coding protein_coding MGP_129S1SvImJ_T0067537.1 MGP_129S1SvImJ_G0028707.1 mouse_genomes_project 4 121505247 121525533 - MGP_129S1SvImJ_P0067537 Foxo6 protein_coding protein_coding MGP_129S1SvImJ_T0066534.1 MGP_129S1SvImJ_G0028498.1 mouse_genomes_project 4 102304297 102307000 - MGP_129S1SvImJ_P0066534 Gm12790 protein_coding protein_coding MGP_129S1SvImJ_T0066275.1 MGP_129S1SvImJ_G0028421.1 mouse_genomes_project 4 88400424 88401174 - MGP_129S1SvImJ_P0066275 Ifnb1 protein_coding protein_coding MGP_129S1SvImJ_T0069331.1 MGP_129S1SvImJ_G0029138.1 mouse_genomes_project 4 153166853 153272563 - MGP_129S1SvImJ_P0069331 Ube4b protein_coding protein_coding MGP_129S1SvImJ_T0069332.1 MGP_129S1SvImJ_G0029138.1 mouse_genomes_project 4 153166859 153173554 - MGP_129S1SvImJ_P0069332 Ube4b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069333.1 MGP_129S1SvImJ_G0029138.1 mouse_genomes_project 4 153167933 153170267 - Ube4b protein_coding processed_transcript MGP_129S1SvImJ_T0069334.1 MGP_129S1SvImJ_G0029138.1 mouse_genomes_project 4 153168110 153271719 - MGP_129S1SvImJ_P0069334 Ube4b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069335.1 MGP_129S1SvImJ_G0029138.1 mouse_genomes_project 4 153168110 153271719 - MGP_129S1SvImJ_P0069335 Ube4b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069336.1 MGP_129S1SvImJ_G0029138.1 mouse_genomes_project 4 153173641 153174548 - Ube4b protein_coding processed_transcript MGP_129S1SvImJ_T0069337.1 MGP_129S1SvImJ_G0029138.1 mouse_genomes_project 4 153191795 153192773 - Ube4b protein_coding retained_intron MGP_129S1SvImJ_T0069338.1 MGP_129S1SvImJ_G0029138.1 mouse_genomes_project 4 153206413 153272445 - Ube4b protein_coding retained_intron MGP_129S1SvImJ_T0069339.1 MGP_129S1SvImJ_G0029138.1 mouse_genomes_project 4 153228156 153272414 - Ube4b protein_coding processed_transcript MGP_129S1SvImJ_T0069340.1 MGP_129S1SvImJ_G0029138.1 mouse_genomes_project 4 153230140 153230780 - Ube4b protein_coding processed_transcript MGP_129S1SvImJ_T0069341.1 MGP_129S1SvImJ_G0029138.1 mouse_genomes_project 4 153243191 153272030 - Ube4b protein_coding retained_intron MGP_129S1SvImJ_T0069342.1 MGP_129S1SvImJ_G0029138.1 mouse_genomes_project 4 153243203 153244069 - Ube4b protein_coding processed_transcript MGP_129S1SvImJ_T0011591.1 MGP_129S1SvImJ_G0009707.1 mouse_genomes_project 4 78109166 78109252 + Gm22262 misc_RNA misc_RNA MGP_129S1SvImJ_T0004566.1 MGP_129S1SvImJ_G0003969.1 mouse_genomes_project 4 135733267 135736445 - Gm13257 antisense antisense MGP_129S1SvImJ_T0065611.1 MGP_129S1SvImJ_G0028260.1 mouse_genomes_project 4 44813684 44854964 - MGP_129S1SvImJ_P0065611 Trim14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065612.1 MGP_129S1SvImJ_G0028260.1 mouse_genomes_project 4 44814722 44853256 - Trim14 protein_coding processed_transcript MGP_129S1SvImJ_T0065613.1 MGP_129S1SvImJ_G0028260.1 mouse_genomes_project 4 44826752 44854983 - MGP_129S1SvImJ_P0065613 Trim14 protein_coding protein_coding MGP_129S1SvImJ_T0065614.1 MGP_129S1SvImJ_G0028260.1 mouse_genomes_project 4 44827293 44853284 - Trim14 protein_coding processed_transcript MGP_129S1SvImJ_T0065615.1 MGP_129S1SvImJ_G0028260.1 mouse_genomes_project 4 44830800 44854956 - MGP_129S1SvImJ_P0065615 Trim14 protein_coding protein_coding MGP_129S1SvImJ_T0065616.1 MGP_129S1SvImJ_G0028260.1 mouse_genomes_project 4 44838286 44853446 - Trim14 protein_coding processed_transcript MGP_129S1SvImJ_T0010608.1 MGP_129S1SvImJ_G0008724.1 mouse_genomes_project 4 43631149 43631262 - Gm25692 miRNA miRNA MGP_129S1SvImJ_T0099837.1 MGP_129S1SvImJ_G0037904.1 mouse_genomes_project 4 67335967 67336138 + Gm23738 snRNA snRNA MGP_129S1SvImJ_T0014767.1 MGP_129S1SvImJ_G0012856.1 mouse_genomes_project 4 122422806 122426397 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098937.1 MGP_129S1SvImJ_G0037015.1 mouse_genomes_project 4 132793203 132796937 + Gm12971 sense_intronic sense_intronic MGP_129S1SvImJ_T0067052.1 MGP_129S1SvImJ_G0028601.1 mouse_genomes_project 4 116293790 116304456 - MGP_129S1SvImJ_P0067052 Cyp4a14 protein_coding protein_coding MGP_129S1SvImJ_T0067053.1 MGP_129S1SvImJ_G0028601.1 mouse_genomes_project 4 116302387 116304454 - Cyp4a14 protein_coding processed_transcript MGP_129S1SvImJ_T0099865.1 MGP_129S1SvImJ_G0037932.1 mouse_genomes_project 4 118174596 118174712 + Gm23287 snRNA snRNA MGP_129S1SvImJ_T0067231.1 MGP_129S1SvImJ_G0028639.1 mouse_genomes_project 4 117937079 117942916 - MGP_129S1SvImJ_P0067231 Urod protein_coding protein_coding MGP_129S1SvImJ_T0067232.1 MGP_129S1SvImJ_G0028639.1 mouse_genomes_project 4 117938719 117940168 - Urod protein_coding retained_intron MGP_129S1SvImJ_T0067233.1 MGP_129S1SvImJ_G0028639.1 mouse_genomes_project 4 117938787 117940389 - Urod protein_coding retained_intron MGP_129S1SvImJ_T0067234.1 MGP_129S1SvImJ_G0028639.1 mouse_genomes_project 4 117939578 117942867 - Urod protein_coding retained_intron MGP_129S1SvImJ_T0067235.1 MGP_129S1SvImJ_G0028639.1 mouse_genomes_project 4 117939963 117942860 - MGP_129S1SvImJ_P0067235 Urod protein_coding protein_coding MGP_129S1SvImJ_T0067236.1 MGP_129S1SvImJ_G0028639.1 mouse_genomes_project 4 117940786 117942849 - Urod protein_coding retained_intron MGP_129S1SvImJ_T0067237.1 MGP_129S1SvImJ_G0028639.1 mouse_genomes_project 4 117941286 117942848 - Urod protein_coding retained_intron MGP_129S1SvImJ_T0067238.1 MGP_129S1SvImJ_G0028639.1 mouse_genomes_project 4 117941455 117942100 - Urod protein_coding processed_transcript MGP_129S1SvImJ_T0067239.1 MGP_129S1SvImJ_G0028639.1 mouse_genomes_project 4 117941610 117942843 - Urod protein_coding retained_intron MGP_129S1SvImJ_T0067240.1 MGP_129S1SvImJ_G0028639.1 mouse_genomes_project 4 117941782 117942883 - Urod protein_coding retained_intron MGP_129S1SvImJ_T0007895.1 MGP_129S1SvImJ_G0006458.1 mouse_genomes_project 4 87108665 87111574 + Gm12600 lincRNA lincRNA MGP_129S1SvImJ_T0102516.1 MGP_129S1SvImJ_G0040350.1 mouse_genomes_project 4 47772130 47783223 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0101116.1 MGP_129S1SvImJ_G0039183.1 mouse_genomes_project 4 54184522 54184656 - Gm22150 snoRNA snoRNA MGP_129S1SvImJ_T0007873.1 MGP_129S1SvImJ_G0006438.1 mouse_genomes_project 4 58162844 58166058 + Gm12596 lincRNA lincRNA MGP_129S1SvImJ_T0014545.1 MGP_129S1SvImJ_G0012634.1 mouse_genomes_project 4 44563497 44564427 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068444.1 MGP_129S1SvImJ_G0028911.1 mouse_genomes_project 4 136415222 136427987 - Cd52 protein_coding processed_transcript MGP_129S1SvImJ_T0068447.1 MGP_129S1SvImJ_G0028911.1 mouse_genomes_project 4 136426481 136428028 - MGP_129S1SvImJ_P0068447 Cd52 protein_coding protein_coding MGP_129S1SvImJ_T0068448.1 MGP_129S1SvImJ_G0028911.1 mouse_genomes_project 4 136427021 136427984 - Cd52 protein_coding processed_transcript MGP_129S1SvImJ_T0014464.1 MGP_129S1SvImJ_G0012553.1 mouse_genomes_project 4 19601443 19602015 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101083.1 MGP_129S1SvImJ_G0039150.1 mouse_genomes_project 4 83427 83554 + Gm22541 snoRNA snoRNA MGP_129S1SvImJ_T0007949.1 MGP_129S1SvImJ_G0006501.1 mouse_genomes_project 4 125801402 125811479 - Gm12916 lincRNA lincRNA MGP_129S1SvImJ_T0014805.1 MGP_129S1SvImJ_G0012894.1 mouse_genomes_project 4 135089857 135091721 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007819.1 MGP_129S1SvImJ_G0006392.1 mouse_genomes_project 4 13368444 13416387 + Gm11861 lincRNA lincRNA MGP_129S1SvImJ_T0067198.1 MGP_129S1SvImJ_G0028632.1 mouse_genomes_project 4 117618633 117624868 - MGP_129S1SvImJ_P0067198 Mmachc protein_coding protein_coding MGP_129S1SvImJ_T0067199.1 MGP_129S1SvImJ_G0028632.1 mouse_genomes_project 4 117620784 117624750 - Mmachc protein_coding processed_transcript MGP_129S1SvImJ_T0007902.1 MGP_129S1SvImJ_G0006463.1 mouse_genomes_project 4 91899788 91900887 - 4930577H14Rik lincRNA lincRNA MGP_129S1SvImJ_T0069442.1 MGP_129S1SvImJ_G0029159.1 mouse_genomes_project 4 154945170 155930306 - MGP_129S1SvImJ_P0069442 Camta1 protein_coding protein_coding MGP_129S1SvImJ_T0069460.1 MGP_129S1SvImJ_G0029159.1 mouse_genomes_project 4 155090384 155930513 - MGP_129S1SvImJ_P0069460 Camta1 protein_coding protein_coding MGP_129S1SvImJ_T0069461.1 MGP_129S1SvImJ_G0029159.1 mouse_genomes_project 4 155090385 155930383 - MGP_129S1SvImJ_P0069461 Camta1 protein_coding protein_coding MGP_129S1SvImJ_T0069462.1 MGP_129S1SvImJ_G0029159.1 mouse_genomes_project 4 155090385 155110687 - MGP_129S1SvImJ_P0069462 Camta1 protein_coding protein_coding MGP_129S1SvImJ_T0069463.1 MGP_129S1SvImJ_G0029159.1 mouse_genomes_project 4 155090673 155139549 - MGP_129S1SvImJ_P0069463 Camta1 protein_coding protein_coding MGP_129S1SvImJ_T0069464.1 MGP_129S1SvImJ_G0029159.1 mouse_genomes_project 4 155090673 155160608 - MGP_129S1SvImJ_P0069464 Camta1 protein_coding protein_coding MGP_129S1SvImJ_T0069465.1 MGP_129S1SvImJ_G0029159.1 mouse_genomes_project 4 155116961 155170718 - Camta1 protein_coding processed_transcript MGP_129S1SvImJ_T0069466.1 MGP_129S1SvImJ_G0029159.1 mouse_genomes_project 4 155117046 155139276 - MGP_129S1SvImJ_P0069466 Camta1 protein_coding protein_coding MGP_129S1SvImJ_T0069468.1 MGP_129S1SvImJ_G0029159.1 mouse_genomes_project 4 155521065 155930287 - Camta1 protein_coding processed_transcript MGP_129S1SvImJ_T0069469.1 MGP_129S1SvImJ_G0029159.1 mouse_genomes_project 4 155856433 155930341 - Camta1 protein_coding processed_transcript MGP_129S1SvImJ_T0069470.1 MGP_129S1SvImJ_G0029159.1 mouse_genomes_project 4 155858099 155930375 - Camta1 protein_coding processed_transcript MGP_129S1SvImJ_T0069471.1 MGP_129S1SvImJ_G0029159.1 mouse_genomes_project 4 155858363 155930306 - MGP_129S1SvImJ_P0069471 Camta1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0007878.1 MGP_129S1SvImJ_G0006443.1 mouse_genomes_project 4 63117677 63125925 + Gm11216 lincRNA lincRNA MGP_129S1SvImJ_T0066492.1 MGP_129S1SvImJ_G0028487.1 mouse_genomes_project 4 100751338 100824526 + MGP_129S1SvImJ_P0066492 Ube2u protein_coding protein_coding MGP_129S1SvImJ_T0066493.1 MGP_129S1SvImJ_G0028487.1 mouse_genomes_project 4 100751356 100824524 + MGP_129S1SvImJ_P0066493 Ube2u protein_coding protein_coding MGP_129S1SvImJ_T0066494.1 MGP_129S1SvImJ_G0028487.1 mouse_genomes_project 4 100751671 100755812 + MGP_129S1SvImJ_P0066494 Ube2u protein_coding unknown_likely_coding MGP_129S1SvImJ_T0014559.1 MGP_129S1SvImJ_G0012648.1 mouse_genomes_project 4 48235885 48236401 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069944.1 MGP_129S1SvImJ_G0029252.1 mouse_genomes_project 4 160602188 160607897 - MGP_129S1SvImJ_P0069944 Klhl17 protein_coding protein_coding MGP_129S1SvImJ_T0064972.1 MGP_129S1SvImJ_G0028124.1 mouse_genomes_project 4 31479234 31489968 + Cnr1 protein_coding processed_transcript MGP_129S1SvImJ_T0064973.1 MGP_129S1SvImJ_G0028124.1 mouse_genomes_project 4 31479273 31503473 + MGP_129S1SvImJ_P0064973 Cnr1 protein_coding protein_coding MGP_129S1SvImJ_T0064974.1 MGP_129S1SvImJ_G0028124.1 mouse_genomes_project 4 31480843 31503461 + MGP_129S1SvImJ_P0064974 Cnr1 protein_coding protein_coding MGP_129S1SvImJ_T0099847.1 MGP_129S1SvImJ_G0037914.1 mouse_genomes_project 4 97026265 97026329 + Gm27521 snRNA snRNA MGP_129S1SvImJ_T0069115.1 MGP_129S1SvImJ_G0029071.1 mouse_genomes_project 4 146736094 147411627 + MGP_129S1SvImJ_P0069115 protein_coding protein_coding MGP_129S1SvImJ_T0066632.1 MGP_129S1SvImJ_G0028519.1 mouse_genomes_project 4 107101957 107110706 - MGP_129S1SvImJ_P0066632 Bsnd protein_coding protein_coding MGP_129S1SvImJ_T0067076.1 MGP_129S1SvImJ_G0028609.1 mouse_genomes_project 4 116670789 116678887 + MGP_129S1SvImJ_P0067076 Mob3c protein_coding protein_coding MGP_129S1SvImJ_T0067077.1 MGP_129S1SvImJ_G0028609.1 mouse_genomes_project 4 116670794 116674413 + Mob3c protein_coding retained_intron MGP_129S1SvImJ_T0067078.1 MGP_129S1SvImJ_G0028609.1 mouse_genomes_project 4 116671355 116674243 + MGP_129S1SvImJ_P0067078 Mob3c protein_coding protein_coding MGP_129S1SvImJ_T0065440.1 MGP_129S1SvImJ_G0028226.1 mouse_genomes_project 4 41948486 41949498 - MGP_129S1SvImJ_P0065440 Olfr156 protein_coding protein_coding MGP_129S1SvImJ_T0066736.1 MGP_129S1SvImJ_G0028538.1 mouse_genomes_project 4 107999426 108050080 + MGP_129S1SvImJ_P0066736 Yipf1 protein_coding protein_coding MGP_129S1SvImJ_T0066737.1 MGP_129S1SvImJ_G0028538.1 mouse_genomes_project 4 107999432 108006353 + Yipf1 protein_coding processed_transcript MGP_129S1SvImJ_T0066738.1 MGP_129S1SvImJ_G0028538.1 mouse_genomes_project 4 107999447 108040909 + MGP_129S1SvImJ_P0066738 Yipf1 protein_coding protein_coding MGP_129S1SvImJ_T0066739.1 MGP_129S1SvImJ_G0028538.1 mouse_genomes_project 4 107999475 108035029 + MGP_129S1SvImJ_P0066739 Yipf1 protein_coding protein_coding MGP_129S1SvImJ_T0066740.1 MGP_129S1SvImJ_G0028538.1 mouse_genomes_project 4 107999500 108003933 + MGP_129S1SvImJ_P0066740 Yipf1 protein_coding protein_coding MGP_129S1SvImJ_T0066741.1 MGP_129S1SvImJ_G0028538.1 mouse_genomes_project 4 108000195 108000901 + Yipf1 protein_coding processed_transcript MGP_129S1SvImJ_T0066742.1 MGP_129S1SvImJ_G0028538.1 mouse_genomes_project 4 108000826 108034640 + Yipf1 protein_coding processed_transcript MGP_129S1SvImJ_T0066743.1 MGP_129S1SvImJ_G0028538.1 mouse_genomes_project 4 108003887 108050081 + Yipf1 protein_coding processed_transcript MGP_129S1SvImJ_T0066744.1 MGP_129S1SvImJ_G0028538.1 mouse_genomes_project 4 108011043 108026463 + Yipf1 protein_coding processed_transcript MGP_129S1SvImJ_T0066745.1 MGP_129S1SvImJ_G0028538.1 mouse_genomes_project 4 108033072 108042026 + Yipf1 protein_coding processed_transcript MGP_129S1SvImJ_T0066746.1 MGP_129S1SvImJ_G0028538.1 mouse_genomes_project 4 108034515 108050080 + Yipf1 protein_coding processed_transcript MGP_129S1SvImJ_T0004621.1 MGP_129S1SvImJ_G0004011.1 mouse_genomes_project 4 155421629 155424734 + 4930589P08Rik antisense antisense MGP_129S1SvImJ_T0067423.1 MGP_129S1SvImJ_G0028675.1 mouse_genomes_project 4 119736380 119737328 + MGP_129S1SvImJ_P0067423 Olfr62 protein_coding protein_coding MGP_129S1SvImJ_T0065949.1 MGP_129S1SvImJ_G0028354.1 mouse_genomes_project 4 61461183 61478570 + MGP_129S1SvImJ_P0065949 Bspry protein_coding protein_coding MGP_129S1SvImJ_T0065950.1 MGP_129S1SvImJ_G0028354.1 mouse_genomes_project 4 61461183 61478570 + MGP_129S1SvImJ_P0065950 Bspry protein_coding protein_coding MGP_129S1SvImJ_T0065951.1 MGP_129S1SvImJ_G0028354.1 mouse_genomes_project 4 61461219 61467589 + MGP_129S1SvImJ_P0065951 Bspry protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067527.1 MGP_129S1SvImJ_G0028705.1 mouse_genomes_project 4 120940177 121087047 + Hivep3 protein_coding processed_transcript MGP_129S1SvImJ_T0067528.1 MGP_129S1SvImJ_G0028705.1 mouse_genomes_project 4 120940177 121026070 + Hivep3 protein_coding processed_transcript MGP_129S1SvImJ_T0067529.1 MGP_129S1SvImJ_G0028705.1 mouse_genomes_project 4 120940189 120943178 + MGP_129S1SvImJ_P0067529 Hivep3 protein_coding protein_coding MGP_129S1SvImJ_T0067530.1 MGP_129S1SvImJ_G0028705.1 mouse_genomes_project 4 120940234 121085942 + Hivep3 protein_coding processed_transcript MGP_129S1SvImJ_T0067531.1 MGP_129S1SvImJ_G0028705.1 mouse_genomes_project 4 120969238 121086411 + Hivep3 protein_coding processed_transcript MGP_129S1SvImJ_T0067532.1 MGP_129S1SvImJ_G0028705.1 mouse_genomes_project 4 121025652 121220645 + Hivep3 protein_coding processed_transcript MGP_129S1SvImJ_T0067533.1 MGP_129S1SvImJ_G0028705.1 mouse_genomes_project 4 121025676 121087047 + Hivep3 protein_coding processed_transcript MGP_129S1SvImJ_T0067534.1 MGP_129S1SvImJ_G0028705.1 mouse_genomes_project 4 121025816 121369545 + MGP_129S1SvImJ_P0067534 Hivep3 protein_coding protein_coding MGP_129S1SvImJ_T0067535.1 MGP_129S1SvImJ_G0028705.1 mouse_genomes_project 4 121326459 121364842 + MGP_129S1SvImJ_P0067535 Hivep3 protein_coding protein_coding MGP_129S1SvImJ_T0069116.1 MGP_129S1SvImJ_G0029072.1 mouse_genomes_project 4 146736094 147367214 + MGP_129S1SvImJ_P0069116 protein_coding protein_coding MGP_129S1SvImJ_T0064749.1 MGP_129S1SvImJ_G0028062.1 mouse_genomes_project 4 8791720 8799425 + MGP_129S1SvImJ_P0064749 protein_coding protein_coding MGP_129S1SvImJ_T0064750.1 MGP_129S1SvImJ_G0028062.1 mouse_genomes_project 4 8791722 8799425 + MGP_129S1SvImJ_P0064750 protein_coding protein_coding MGP_129S1SvImJ_T0067552.1 MGP_129S1SvImJ_G0028709.1 mouse_genomes_project 4 121792017 121796448 + MGP_129S1SvImJ_P0067552 Slfnl1 protein_coding protein_coding MGP_129S1SvImJ_T0007848.1 MGP_129S1SvImJ_G0006419.1 mouse_genomes_project 4 43965374 43966627 + Gm12410 lincRNA lincRNA MGP_129S1SvImJ_T0067171.1 MGP_129S1SvImJ_G0028627.1 mouse_genomes_project 4 117456344 117496004 + MGP_129S1SvImJ_P0067171 Gpbp1l1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0067172.1 MGP_129S1SvImJ_G0028627.1 mouse_genomes_project 4 117456364 117497821 + MGP_129S1SvImJ_P0067172 Gpbp1l1 protein_coding protein_coding MGP_129S1SvImJ_T0067173.1 MGP_129S1SvImJ_G0028627.1 mouse_genomes_project 4 117456785 117496082 + MGP_129S1SvImJ_P0067173 Gpbp1l1 protein_coding protein_coding MGP_129S1SvImJ_T0067174.1 MGP_129S1SvImJ_G0028627.1 mouse_genomes_project 4 117480951 117484492 + Gpbp1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0067175.1 MGP_129S1SvImJ_G0028627.1 mouse_genomes_project 4 117484402 117491844 + Gpbp1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0014518.1 MGP_129S1SvImJ_G0012607.1 mouse_genomes_project 4 33059130 33059698 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018056.1 MGP_129S1SvImJ_G0015532.1 mouse_genomes_project 4 6399407 6452614 + 4930412C18Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018057.1 MGP_129S1SvImJ_G0015532.1 mouse_genomes_project 4 6399407 6454075 + 4930412C18Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018058.1 MGP_129S1SvImJ_G0015532.1 mouse_genomes_project 4 6399473 6405800 + 4930412C18Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018059.1 MGP_129S1SvImJ_G0015532.1 mouse_genomes_project 4 6399501 6409560 + 4930412C18Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018060.1 MGP_129S1SvImJ_G0015532.1 mouse_genomes_project 4 6399619 6450949 + 4930412C18Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0068365.1 MGP_129S1SvImJ_G0028893.1 mouse_genomes_project 4 135606294 135663365 + MGP_129S1SvImJ_P0068365 Slc9a1 protein_coding protein_coding MGP_129S1SvImJ_T0068366.1 MGP_129S1SvImJ_G0028893.1 mouse_genomes_project 4 135607229 135651981 + Slc9a1 protein_coding processed_transcript MGP_129S1SvImJ_T0068367.1 MGP_129S1SvImJ_G0028893.1 mouse_genomes_project 4 135656156 135660219 + Slc9a1 protein_coding processed_transcript MGP_129S1SvImJ_T0068368.1 MGP_129S1SvImJ_G0028893.1 mouse_genomes_project 4 135659149 135659828 + Slc9a1 protein_coding processed_transcript MGP_129S1SvImJ_T0068369.1 MGP_129S1SvImJ_G0028893.1 mouse_genomes_project 4 135659634 135661984 + Slc9a1 protein_coding processed_transcript MGP_129S1SvImJ_T0064883.1 MGP_129S1SvImJ_G0028100.1 mouse_genomes_project 4 22015491 22022373 + MGP_129S1SvImJ_P0064883 Ndufaf4 protein_coding protein_coding MGP_129S1SvImJ_T0064884.1 MGP_129S1SvImJ_G0028100.1 mouse_genomes_project 4 22015539 22020877 + Ndufaf4 protein_coding processed_transcript MGP_129S1SvImJ_T0064885.1 MGP_129S1SvImJ_G0028100.1 mouse_genomes_project 4 22015584 22020857 + MGP_129S1SvImJ_P0064885 Ndufaf4 protein_coding protein_coding MGP_129S1SvImJ_T0065250.1 MGP_129S1SvImJ_G0028197.1 mouse_genomes_project 4 41083309 41091373 - Fancg protein_coding retained_intron MGP_129S1SvImJ_T0065251.1 MGP_129S1SvImJ_G0028197.1 mouse_genomes_project 4 41083309 41091240 - MGP_129S1SvImJ_P0065251 Fancg protein_coding protein_coding MGP_129S1SvImJ_T0065252.1 MGP_129S1SvImJ_G0028197.1 mouse_genomes_project 4 41083888 41084899 - Fancg protein_coding retained_intron MGP_129S1SvImJ_T0065253.1 MGP_129S1SvImJ_G0028197.1 mouse_genomes_project 4 41083977 41087416 - Fancg protein_coding processed_transcript MGP_129S1SvImJ_T0065254.1 MGP_129S1SvImJ_G0028197.1 mouse_genomes_project 4 41084226 41087461 - Fancg protein_coding processed_transcript MGP_129S1SvImJ_T0065255.1 MGP_129S1SvImJ_G0028197.1 mouse_genomes_project 4 41084879 41087729 - Fancg protein_coding processed_transcript MGP_129S1SvImJ_T0065256.1 MGP_129S1SvImJ_G0028197.1 mouse_genomes_project 4 41086178 41090048 - Fancg protein_coding processed_transcript MGP_129S1SvImJ_T0065257.1 MGP_129S1SvImJ_G0028197.1 mouse_genomes_project 4 41089961 41091055 - Fancg protein_coding retained_intron MGP_129S1SvImJ_T0065258.1 MGP_129S1SvImJ_G0028197.1 mouse_genomes_project 4 41090052 41091107 - Fancg protein_coding retained_intron MGP_129S1SvImJ_T0065259.1 MGP_129S1SvImJ_G0028197.1 mouse_genomes_project 4 41090927 41091391 - Fancg protein_coding processed_transcript MGP_129S1SvImJ_T0069942.1 MGP_129S1SvImJ_G0029251.1 mouse_genomes_project 4 160594601 160601687 - MGP_129S1SvImJ_P0069942 Plekhn1 protein_coding protein_coding MGP_129S1SvImJ_T0069943.1 MGP_129S1SvImJ_G0029251.1 mouse_genomes_project 4 160594924 160601636 - MGP_129S1SvImJ_P0069943 Plekhn1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0065957.1 MGP_129S1SvImJ_G0028357.1 mouse_genomes_project 4 61513696 61516225 - MGP_129S1SvImJ_P0065957 Pole3 protein_coding protein_coding MGP_129S1SvImJ_T0065958.1 MGP_129S1SvImJ_G0028357.1 mouse_genomes_project 4 61513696 61516225 - MGP_129S1SvImJ_P0065958 Pole3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065959.1 MGP_129S1SvImJ_G0028357.1 mouse_genomes_project 4 61515491 61516195 - Pole3 protein_coding retained_intron MGP_129S1SvImJ_T0007922.1 MGP_129S1SvImJ_G0006480.1 mouse_genomes_project 4 103708929 103729762 + 4930456L15Rik lincRNA lincRNA MGP_129S1SvImJ_T0064774.1 MGP_129S1SvImJ_G0028069.1 mouse_genomes_project 4 11677891 11731863 + MGP_129S1SvImJ_P0064774 Tmem55a protein_coding protein_coding MGP_129S1SvImJ_T0068146.1 MGP_129S1SvImJ_G0028848.1 mouse_genomes_project 4 132314691 132315204 - MGP_129S1SvImJ_P0068146 Gm10570 protein_coding protein_coding MGP_129S1SvImJ_T0014652.1 MGP_129S1SvImJ_G0012741.1 mouse_genomes_project 4 84330597 84331645 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066499.1 MGP_129S1SvImJ_G0028489.1 mouse_genomes_project 4 101304418 101304817 - MGP_129S1SvImJ_P0066499 Gm10577 protein_coding protein_coding MGP_129S1SvImJ_T0065733.1 MGP_129S1SvImJ_G0028292.1 mouse_genomes_project 4 51431511 51432471 + MGP_129S1SvImJ_P0065733 Olfr275 protein_coding protein_coding MGP_129S1SvImJ_T0004615.1 MGP_129S1SvImJ_G0004006.1 mouse_genomes_project 4 153421661 153423835 - Gm13066 antisense antisense MGP_129S1SvImJ_T0018064.1 MGP_129S1SvImJ_G0015534.1 mouse_genomes_project 4 13059463 13172507 + A530072M11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0067048.1 MGP_129S1SvImJ_G0028597.1 mouse_genomes_project 4 116013199 116025596 + MGP_129S1SvImJ_P0067048 Cyp4a29 protein_coding protein_coding MGP_129S1SvImJ_T0067584.1 MGP_129S1SvImJ_G0028719.1 mouse_genomes_project 4 122342893 122358823 + MGP_129S1SvImJ_P0067584 Col9a2 protein_coding protein_coding MGP_129S1SvImJ_T0067585.1 MGP_129S1SvImJ_G0028719.1 mouse_genomes_project 4 122343256 122347851 + Col9a2 protein_coding retained_intron MGP_129S1SvImJ_T0067586.1 MGP_129S1SvImJ_G0028719.1 mouse_genomes_project 4 122356499 122358320 + Col9a2 protein_coding processed_transcript MGP_129S1SvImJ_T0066640.1 MGP_129S1SvImJ_G0028523.1 mouse_genomes_project 4 107288439 107290910 + MGP_129S1SvImJ_P0066640 Pars2 protein_coding protein_coding MGP_129S1SvImJ_T0066641.1 MGP_129S1SvImJ_G0028523.1 mouse_genomes_project 4 107288468 107292651 + MGP_129S1SvImJ_P0066641 Pars2 protein_coding protein_coding MGP_129S1SvImJ_T0066642.1 MGP_129S1SvImJ_G0028523.1 mouse_genomes_project 4 107288473 107290237 + Pars2 protein_coding processed_transcript MGP_129S1SvImJ_T0066643.1 MGP_129S1SvImJ_G0028523.1 mouse_genomes_project 4 107288476 107292653 + MGP_129S1SvImJ_P0066643 Pars2 protein_coding protein_coding MGP_129S1SvImJ_T0068997.1 MGP_129S1SvImJ_G0029041.1 mouse_genomes_project 4 144242739 144248713 + MGP_129S1SvImJ_P0068997 Rsg1 protein_coding protein_coding MGP_129S1SvImJ_T0068998.1 MGP_129S1SvImJ_G0029041.1 mouse_genomes_project 4 144243228 144247242 + Rsg1 protein_coding processed_transcript MGP_129S1SvImJ_T0068999.1 MGP_129S1SvImJ_G0029041.1 mouse_genomes_project 4 144247213 144255711 + Rsg1 protein_coding processed_transcript MGP_129S1SvImJ_T0014500.1 MGP_129S1SvImJ_G0012589.1 mouse_genomes_project 4 29591835 29592272 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068784.1 MGP_129S1SvImJ_G0028989.1 mouse_genomes_project 4 140691012 140833664 + MGP_129S1SvImJ_P0068784 Eif4g3 protein_coding protein_coding MGP_129S1SvImJ_T0068785.1 MGP_129S1SvImJ_G0028989.1 mouse_genomes_project 4 140691012 140820853 + MGP_129S1SvImJ_P0068785 Eif4g3 protein_coding protein_coding MGP_129S1SvImJ_T0068786.1 MGP_129S1SvImJ_G0028989.1 mouse_genomes_project 4 140691012 140810028 + MGP_129S1SvImJ_P0068786 Eif4g3 protein_coding protein_coding MGP_129S1SvImJ_T0068787.1 MGP_129S1SvImJ_G0028989.1 mouse_genomes_project 4 140691446 140920146 + MGP_129S1SvImJ_P0068787 Eif4g3 protein_coding protein_coding MGP_129S1SvImJ_T0068788.1 MGP_129S1SvImJ_G0028989.1 mouse_genomes_project 4 140691446 140920146 + MGP_129S1SvImJ_P0068788 Eif4g3 protein_coding protein_coding MGP_129S1SvImJ_T0068789.1 MGP_129S1SvImJ_G0028989.1 mouse_genomes_project 4 140691466 140692141 + Eif4g3 protein_coding processed_transcript MGP_129S1SvImJ_T0068790.1 MGP_129S1SvImJ_G0028989.1 mouse_genomes_project 4 140691474 140759896 + Eif4g3 protein_coding processed_transcript MGP_129S1SvImJ_T0068791.1 MGP_129S1SvImJ_G0028989.1 mouse_genomes_project 4 140691503 140919192 + MGP_129S1SvImJ_P0068791 Eif4g3 protein_coding protein_coding MGP_129S1SvImJ_T0068792.1 MGP_129S1SvImJ_G0028989.1 mouse_genomes_project 4 140691938 140919192 + MGP_129S1SvImJ_P0068792 Eif4g3 protein_coding protein_coding MGP_129S1SvImJ_T0068793.1 MGP_129S1SvImJ_G0028989.1 mouse_genomes_project 4 140703860 140808003 + MGP_129S1SvImJ_P0068793 Eif4g3 protein_coding protein_coding MGP_129S1SvImJ_T0068794.1 MGP_129S1SvImJ_G0028989.1 mouse_genomes_project 4 140861228 140921575 + MGP_129S1SvImJ_P0068794 Eif4g3 protein_coding protein_coding MGP_129S1SvImJ_T0068795.1 MGP_129S1SvImJ_G0028989.1 mouse_genomes_project 4 140890704 140921575 + Eif4g3 protein_coding processed_transcript MGP_129S1SvImJ_T0068796.1 MGP_129S1SvImJ_G0028989.1 mouse_genomes_project 4 140893335 140901233 + Eif4g3 protein_coding retained_intron MGP_129S1SvImJ_T0068797.1 MGP_129S1SvImJ_G0028989.1 mouse_genomes_project 4 140897265 140901013 + Eif4g3 protein_coding processed_transcript MGP_129S1SvImJ_T0068798.1 MGP_129S1SvImJ_G0028989.1 mouse_genomes_project 4 140914376 140916257 + Eif4g3 protein_coding processed_transcript MGP_129S1SvImJ_T0101158.1 MGP_129S1SvImJ_G0039225.1 mouse_genomes_project 4 132800888 132800971 + Gm24091 snoRNA snoRNA MGP_129S1SvImJ_T0098932.1 MGP_129S1SvImJ_G0037010.1 mouse_genomes_project 4 82154244 82156516 - Gm11267 sense_intronic sense_intronic MGP_129S1SvImJ_T0007900.1 MGP_129S1SvImJ_G0006461.1 mouse_genomes_project 4 90163432 90171911 + lincRNA lincRNA MGP_129S1SvImJ_T0010593.1 MGP_129S1SvImJ_G0008709.1 mouse_genomes_project 4 22979536 22979646 - Gm26067 miRNA miRNA MGP_129S1SvImJ_T0066795.1 MGP_129S1SvImJ_G0028546.1 mouse_genomes_project 4 108678098 108724810 + MGP_129S1SvImJ_P0066795 Slc1a7 protein_coding protein_coding MGP_129S1SvImJ_T0066796.1 MGP_129S1SvImJ_G0028546.1 mouse_genomes_project 4 108721361 108724804 + Slc1a7 protein_coding retained_intron MGP_129S1SvImJ_T0004622.1 MGP_129S1SvImJ_G0004012.1 mouse_genomes_project 4 156534637 156535100 + Gm16333 antisense antisense MGP_129S1SvImJ_T0004507.1 MGP_129S1SvImJ_G0003923.1 mouse_genomes_project 4 100794251 100798806 - Ube2uos antisense antisense MGP_129S1SvImJ_T0007863.1 MGP_129S1SvImJ_G0006430.1 mouse_genomes_project 4 54283674 54324389 + Gm12511 lincRNA lincRNA MGP_129S1SvImJ_T0064605.1 MGP_129S1SvImJ_G0028034.1 mouse_genomes_project 4 2775521 2785768 - MGP_129S1SvImJ_P0064605 Cyp7a1 protein_coding protein_coding MGP_129S1SvImJ_T0064606.1 MGP_129S1SvImJ_G0028034.1 mouse_genomes_project 4 2782836 2785770 - Cyp7a1 protein_coding processed_transcript MGP_129S1SvImJ_T0007817.1 MGP_129S1SvImJ_G0006390.1 mouse_genomes_project 4 10691574 10769962 - Gm11823 lincRNA lincRNA MGP_129S1SvImJ_T0018081.1 MGP_129S1SvImJ_G0015546.1 mouse_genomes_project 4 51417736 51434382 + 4930552N02Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0014437.1 MGP_129S1SvImJ_G0012526.1 mouse_genomes_project 4 12867421 12867777 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067668.1 MGP_129S1SvImJ_G0028744.1 mouse_genomes_project 4 125267842 125296029 + Rhbdl2 protein_coding processed_transcript MGP_129S1SvImJ_T0067669.1 MGP_129S1SvImJ_G0028744.1 mouse_genomes_project 4 125267843 125316475 + MGP_129S1SvImJ_P0067669 Rhbdl2 protein_coding protein_coding MGP_129S1SvImJ_T0067670.1 MGP_129S1SvImJ_G0028744.1 mouse_genomes_project 4 125280096 125294672 + Rhbdl2 protein_coding processed_transcript MGP_129S1SvImJ_T0067671.1 MGP_129S1SvImJ_G0028744.1 mouse_genomes_project 4 125297865 125300836 + Rhbdl2 protein_coding processed_transcript MGP_129S1SvImJ_T0069148.1 MGP_129S1SvImJ_G0029100.1 mouse_genomes_project 4 148255930 148293644 + MGP_129S1SvImJ_P0069148 Dhrs3 protein_coding protein_coding MGP_129S1SvImJ_T0069149.1 MGP_129S1SvImJ_G0029100.1 mouse_genomes_project 4 148255930 148293647 + MGP_129S1SvImJ_P0069149 Dhrs3 protein_coding protein_coding MGP_129S1SvImJ_T0069150.1 MGP_129S1SvImJ_G0029100.1 mouse_genomes_project 4 148256180 148294211 + MGP_129S1SvImJ_P0069150 Dhrs3 protein_coding protein_coding MGP_129S1SvImJ_T0069151.1 MGP_129S1SvImJ_G0029100.1 mouse_genomes_project 4 148256238 148285064 + Dhrs3 protein_coding processed_transcript MGP_129S1SvImJ_T0069152.1 MGP_129S1SvImJ_G0029100.1 mouse_genomes_project 4 148256244 148284990 + MGP_129S1SvImJ_P0069152 Dhrs3 protein_coding protein_coding MGP_129S1SvImJ_T0069153.1 MGP_129S1SvImJ_G0029100.1 mouse_genomes_project 4 148256326 148293641 + MGP_129S1SvImJ_P0069153 Dhrs3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069154.1 MGP_129S1SvImJ_G0029100.1 mouse_genomes_project 4 148283966 148285064 + Dhrs3 protein_coding retained_intron MGP_129S1SvImJ_T0014705.1 MGP_129S1SvImJ_G0012794.1 mouse_genomes_project 4 102235527 102236548 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068515.1 MGP_129S1SvImJ_G0028927.1 mouse_genomes_project 4 136826730 136832460 + MGP_129S1SvImJ_P0068515 Stmn1 protein_coding protein_coding MGP_129S1SvImJ_T0068516.1 MGP_129S1SvImJ_G0028927.1 mouse_genomes_project 4 136826809 136829094 + Stmn1 protein_coding processed_transcript MGP_129S1SvImJ_T0068517.1 MGP_129S1SvImJ_G0028927.1 mouse_genomes_project 4 136826816 136831543 + MGP_129S1SvImJ_P0068517 Stmn1 protein_coding protein_coding MGP_129S1SvImJ_T0068518.1 MGP_129S1SvImJ_G0028927.1 mouse_genomes_project 4 136826819 136832282 + MGP_129S1SvImJ_P0068518 Stmn1 protein_coding protein_coding MGP_129S1SvImJ_T0068519.1 MGP_129S1SvImJ_G0028927.1 mouse_genomes_project 4 136828153 136832117 + MGP_129S1SvImJ_P0068519 Stmn1 protein_coding protein_coding MGP_129S1SvImJ_T0008021.1 MGP_129S1SvImJ_G0006547.1 mouse_genomes_project 4 143311599 143316963 + Gm13017 lincRNA lincRNA MGP_129S1SvImJ_T0066690.1 MGP_129S1SvImJ_G0028530.1 mouse_genomes_project 4 107736679 107747994 + Cyb5rl protein_coding retained_intron MGP_129S1SvImJ_T0066691.1 MGP_129S1SvImJ_G0028530.1 mouse_genomes_project 4 107736679 107755514 + MGP_129S1SvImJ_P0066691 Cyb5rl protein_coding protein_coding MGP_129S1SvImJ_T0066692.1 MGP_129S1SvImJ_G0028530.1 mouse_genomes_project 4 107736687 107757249 + MGP_129S1SvImJ_P0066692 Cyb5rl protein_coding protein_coding MGP_129S1SvImJ_T0066693.1 MGP_129S1SvImJ_G0028530.1 mouse_genomes_project 4 107736687 107740607 + MGP_129S1SvImJ_P0066693 Cyb5rl protein_coding protein_coding MGP_129S1SvImJ_T0066694.1 MGP_129S1SvImJ_G0028530.1 mouse_genomes_project 4 107736710 107757956 + MGP_129S1SvImJ_P0066694 Cyb5rl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066695.1 MGP_129S1SvImJ_G0028530.1 mouse_genomes_project 4 107736715 107740623 + MGP_129S1SvImJ_P0066695 Cyb5rl protein_coding protein_coding MGP_129S1SvImJ_T0066696.1 MGP_129S1SvImJ_G0028530.1 mouse_genomes_project 4 107738296 107755514 + MGP_129S1SvImJ_P0066696 Cyb5rl protein_coding protein_coding MGP_129S1SvImJ_T0066697.1 MGP_129S1SvImJ_G0028530.1 mouse_genomes_project 4 107738334 107757679 + MGP_129S1SvImJ_P0066697 Cyb5rl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066698.1 MGP_129S1SvImJ_G0028530.1 mouse_genomes_project 4 107739859 107754493 + MGP_129S1SvImJ_P0066698 Cyb5rl protein_coding protein_coding MGP_129S1SvImJ_T0066699.1 MGP_129S1SvImJ_G0028530.1 mouse_genomes_project 4 107740561 107754028 + MGP_129S1SvImJ_P0066699 Cyb5rl protein_coding protein_coding MGP_129S1SvImJ_T0066700.1 MGP_129S1SvImJ_G0028530.1 mouse_genomes_project 4 107750707 107757465 + MGP_129S1SvImJ_P0066700 Cyb5rl protein_coding protein_coding MGP_129S1SvImJ_T0064953.1 MGP_129S1SvImJ_G0028117.1 mouse_genomes_project 4 30524150 30538282 + MGP_129S1SvImJ_P0064953 Ube2j1 protein_coding protein_coding MGP_129S1SvImJ_T0064954.1 MGP_129S1SvImJ_G0028117.1 mouse_genomes_project 4 30524208 30545431 + MGP_129S1SvImJ_P0064954 Ube2j1 protein_coding protein_coding MGP_129S1SvImJ_T0068843.1 MGP_129S1SvImJ_G0029002.1 mouse_genomes_project 4 141535493 141542587 - MGP_129S1SvImJ_P0068843 Pla2g2f protein_coding protein_coding MGP_129S1SvImJ_T0014591.1 MGP_129S1SvImJ_G0012680.1 mouse_genomes_project 4 58053992 58054447 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007858.1 MGP_129S1SvImJ_G0006426.1 mouse_genomes_project 4 53322413 53322888 - Gm29067 lincRNA lincRNA MGP_129S1SvImJ_T0004573.1 MGP_129S1SvImJ_G0003975.1 mouse_genomes_project 4 138518838 138519246 - Gm24362 antisense antisense MGP_129S1SvImJ_T0014489.1 MGP_129S1SvImJ_G0012578.1 mouse_genomes_project 4 25851995 25852754 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065901.1 MGP_129S1SvImJ_G0028337.1 mouse_genomes_project 4 58491483 58533009 + MGP_129S1SvImJ_P0065901 Hsdl2 protein_coding protein_coding MGP_129S1SvImJ_T0065902.1 MGP_129S1SvImJ_G0028337.1 mouse_genomes_project 4 58505284 58514967 + MGP_129S1SvImJ_P0065902 Hsdl2 protein_coding protein_coding MGP_129S1SvImJ_T0065031.1 MGP_129S1SvImJ_G0028138.1 mouse_genomes_project 4 33353584 33495120 - MGP_129S1SvImJ_P0065031 Lingo2 protein_coding protein_coding MGP_129S1SvImJ_T0065032.1 MGP_129S1SvImJ_G0028138.1 mouse_genomes_project 4 33354343 34656983 - MGP_129S1SvImJ_P0065032 Lingo2 protein_coding protein_coding MGP_129S1SvImJ_T0065033.1 MGP_129S1SvImJ_G0028138.1 mouse_genomes_project 4 33354343 33790265 - MGP_129S1SvImJ_P0065033 Lingo2 protein_coding protein_coding MGP_129S1SvImJ_T0065034.1 MGP_129S1SvImJ_G0028138.1 mouse_genomes_project 4 33354343 33495120 - MGP_129S1SvImJ_P0065034 Lingo2 protein_coding protein_coding MGP_129S1SvImJ_T0065035.1 MGP_129S1SvImJ_G0028138.1 mouse_genomes_project 4 33354780 33711670 - MGP_129S1SvImJ_P0065035 Lingo2 protein_coding protein_coding MGP_129S1SvImJ_T0065036.1 MGP_129S1SvImJ_G0028138.1 mouse_genomes_project 4 33711667 34656244 - Lingo2 protein_coding processed_transcript MGP_129S1SvImJ_T0065037.1 MGP_129S1SvImJ_G0028138.1 mouse_genomes_project 4 34402303 34657504 - Lingo2 protein_coding processed_transcript MGP_129S1SvImJ_T0065038.1 MGP_129S1SvImJ_G0028138.1 mouse_genomes_project 4 34405040 34656225 - Lingo2 protein_coding processed_transcript MGP_129S1SvImJ_T0065039.1 MGP_129S1SvImJ_G0028138.1 mouse_genomes_project 4 34405285 34656247 - Lingo2 protein_coding processed_transcript MGP_129S1SvImJ_T0065040.1 MGP_129S1SvImJ_G0028138.1 mouse_genomes_project 4 34656859 34657507 - Lingo2 protein_coding processed_transcript MGP_129S1SvImJ_T0101707.1 MGP_129S1SvImJ_G0039714.1 mouse_genomes_project 4 58761377 58761920 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0065535.1 MGP_129S1SvImJ_G0028241.1 mouse_genomes_project 4 43405003 43490263 + MGP_129S1SvImJ_P0065535 Frmpd1 protein_coding protein_coding MGP_129S1SvImJ_T0065536.1 MGP_129S1SvImJ_G0028241.1 mouse_genomes_project 4 43405034 43518085 + MGP_129S1SvImJ_P0065536 Frmpd1 protein_coding protein_coding MGP_129S1SvImJ_T0065537.1 MGP_129S1SvImJ_G0028241.1 mouse_genomes_project 4 43427695 43518085 + MGP_129S1SvImJ_P0065537 Frmpd1 protein_coding protein_coding MGP_129S1SvImJ_T0065017.1 MGP_129S1SvImJ_G0028133.1 mouse_genomes_project 4 32399929 32483133 - MGP_129S1SvImJ_P0065017 Zfp292 protein_coding protein_coding MGP_129S1SvImJ_T0065018.1 MGP_129S1SvImJ_G0028133.1 mouse_genomes_project 4 32399929 32483103 - MGP_129S1SvImJ_P0065018 Zfp292 protein_coding protein_coding MGP_129S1SvImJ_T0099817.1 MGP_129S1SvImJ_G0037884.1 mouse_genomes_project 4 29442743 29442861 - Gm26254 snRNA snRNA MGP_129S1SvImJ_T0068124.1 MGP_129S1SvImJ_G0028843.1 mouse_genomes_project 4 132087409 132114916 + MGP_129S1SvImJ_P0068124 Pef1 protein_coding protein_coding MGP_129S1SvImJ_T0068125.1 MGP_129S1SvImJ_G0028843.1 mouse_genomes_project 4 132094291 132114915 + MGP_129S1SvImJ_P0068125 Pef1 protein_coding protein_coding MGP_129S1SvImJ_T0001429.1 MGP_129S1SvImJ_G0001352.1 mouse_genomes_project 4 39662016 39662497 - TEC TEC MGP_129S1SvImJ_T0068381.1 MGP_129S1SvImJ_G0028898.1 mouse_genomes_project 4 135818899 135822043 + MGP_129S1SvImJ_P0068381 Nr0b2 protein_coding protein_coding MGP_129S1SvImJ_T0007973.1 MGP_129S1SvImJ_G0006516.1 mouse_genomes_project 4 131151925 131154993 + Gm12976 lincRNA lincRNA MGP_129S1SvImJ_T0007974.1 MGP_129S1SvImJ_G0006516.1 mouse_genomes_project 4 131153690 131154993 + Gm12976 lincRNA lincRNA MGP_129S1SvImJ_T0014824.1 MGP_129S1SvImJ_G0012913.1 mouse_genomes_project 4 139829656 139830338 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064640.1 MGP_129S1SvImJ_G0028041.1 mouse_genomes_project 4 5894353 5907321 + Clvs1 protein_coding processed_transcript MGP_129S1SvImJ_T0064641.1 MGP_129S1SvImJ_G0028041.1 mouse_genomes_project 4 5894377 5980026 + Clvs1 protein_coding processed_transcript MGP_129S1SvImJ_T0064642.1 MGP_129S1SvImJ_G0028041.1 mouse_genomes_project 4 5894377 6082656 + MGP_129S1SvImJ_P0064642 Clvs1 protein_coding protein_coding MGP_129S1SvImJ_T0064643.1 MGP_129S1SvImJ_G0028041.1 mouse_genomes_project 4 5894390 5907319 + Clvs1 protein_coding processed_transcript MGP_129S1SvImJ_T0064644.1 MGP_129S1SvImJ_G0028041.1 mouse_genomes_project 4 5894407 5906481 + Clvs1 protein_coding processed_transcript MGP_129S1SvImJ_T0064645.1 MGP_129S1SvImJ_G0028041.1 mouse_genomes_project 4 5896511 6082656 + MGP_129S1SvImJ_P0064645 Clvs1 protein_coding protein_coding MGP_129S1SvImJ_T0064646.1 MGP_129S1SvImJ_G0028041.1 mouse_genomes_project 4 5937004 6061052 + Clvs1 protein_coding processed_transcript MGP_129S1SvImJ_T0064647.1 MGP_129S1SvImJ_G0028041.1 mouse_genomes_project 4 5960859 6061089 + Clvs1 protein_coding processed_transcript MGP_129S1SvImJ_T0067021.1 MGP_129S1SvImJ_G0028588.1 mouse_genomes_project 4 115138397 115359807 + MGP_129S1SvImJ_P0067021 Trabd2b protein_coding protein_coding MGP_129S1SvImJ_T0004631.1 MGP_129S1SvImJ_G0004019.1 mouse_genomes_project 4 159328954 159332320 + Gm10564 antisense antisense MGP_129S1SvImJ_T0067613.1 MGP_129S1SvImJ_G0028730.1 mouse_genomes_project 4 124386015 124387103 + MGP_129S1SvImJ_P0067613 Mycl protein_coding protein_coding MGP_129S1SvImJ_T0067614.1 MGP_129S1SvImJ_G0028730.1 mouse_genomes_project 4 124386307 124392859 + MGP_129S1SvImJ_P0067614 Mycl protein_coding protein_coding MGP_129S1SvImJ_T0067615.1 MGP_129S1SvImJ_G0028730.1 mouse_genomes_project 4 124386462 124392859 + MGP_129S1SvImJ_P0067615 Mycl protein_coding protein_coding MGP_129S1SvImJ_T0067616.1 MGP_129S1SvImJ_G0028730.1 mouse_genomes_project 4 124389256 124390844 + Mycl protein_coding processed_transcript MGP_129S1SvImJ_T0067617.1 MGP_129S1SvImJ_G0028730.1 mouse_genomes_project 4 124389715 124390894 + Mycl protein_coding processed_transcript MGP_129S1SvImJ_T0102522.1 MGP_129S1SvImJ_G0040355.1 mouse_genomes_project 4 88484675 88486067 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0067975.1 MGP_129S1SvImJ_G0028817.1 mouse_genomes_project 4 131102540 131110874 - MGP_129S1SvImJ_P0067975 C77080 protein_coding protein_coding MGP_129S1SvImJ_T0067976.1 MGP_129S1SvImJ_G0028817.1 mouse_genomes_project 4 131102540 131126198 - MGP_129S1SvImJ_P0067976 C77080 protein_coding protein_coding MGP_129S1SvImJ_T0067977.1 MGP_129S1SvImJ_G0028817.1 mouse_genomes_project 4 131102545 131135368 - MGP_129S1SvImJ_P0067977 C77080 protein_coding protein_coding MGP_129S1SvImJ_T0067978.1 MGP_129S1SvImJ_G0028817.1 mouse_genomes_project 4 131108322 131151365 - MGP_129S1SvImJ_P0067978 C77080 protein_coding protein_coding MGP_129S1SvImJ_T0014457.1 MGP_129S1SvImJ_G0012546.1 mouse_genomes_project 4 18054389 18055450 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066753.1 MGP_129S1SvImJ_G0028540.1 mouse_genomes_project 4 108128311 108129757 + Glis1 protein_coding processed_transcript MGP_129S1SvImJ_T0066754.1 MGP_129S1SvImJ_G0028540.1 mouse_genomes_project 4 108128337 108247965 + MGP_129S1SvImJ_P0066754 Glis1 protein_coding protein_coding MGP_129S1SvImJ_T0066755.1 MGP_129S1SvImJ_G0028540.1 mouse_genomes_project 4 108128439 108323303 + MGP_129S1SvImJ_P0066755 Glis1 protein_coding protein_coding MGP_129S1SvImJ_T0066756.1 MGP_129S1SvImJ_G0028540.1 mouse_genomes_project 4 108132718 108323303 + MGP_129S1SvImJ_P0066756 Glis1 protein_coding protein_coding MGP_129S1SvImJ_T0066757.1 MGP_129S1SvImJ_G0028540.1 mouse_genomes_project 4 108268048 108315715 + Glis1 protein_coding processed_transcript MGP_129S1SvImJ_T0066758.1 MGP_129S1SvImJ_G0028540.1 mouse_genomes_project 4 108303245 108320636 + Glis1 protein_coding processed_transcript MGP_129S1SvImJ_T0069838.1 MGP_129S1SvImJ_G0029230.1 mouse_genomes_project 4 160176763 160189126 + MGP_129S1SvImJ_P0069838 Ccnl2 protein_coding protein_coding MGP_129S1SvImJ_T0069839.1 MGP_129S1SvImJ_G0029230.1 mouse_genomes_project 4 160176775 160189126 + Ccnl2 protein_coding retained_intron MGP_129S1SvImJ_T0069840.1 MGP_129S1SvImJ_G0029230.1 mouse_genomes_project 4 160176793 160186073 + Ccnl2 protein_coding retained_intron MGP_129S1SvImJ_T0069841.1 MGP_129S1SvImJ_G0029230.1 mouse_genomes_project 4 160177052 160180121 + Ccnl2 protein_coding retained_intron MGP_129S1SvImJ_T0069842.1 MGP_129S1SvImJ_G0029230.1 mouse_genomes_project 4 160177759 160188886 + MGP_129S1SvImJ_P0069842 Ccnl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069843.1 MGP_129S1SvImJ_G0029230.1 mouse_genomes_project 4 160183767 160188936 + MGP_129S1SvImJ_P0069843 Ccnl2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0069131.1 MGP_129S1SvImJ_G0029085.1 mouse_genomes_project 4 147712629 147722328 + MGP_129S1SvImJ_P0069131 protein_coding protein_coding MGP_129S1SvImJ_T0064676.1 MGP_129S1SvImJ_G0028046.1 mouse_genomes_project 4 7626687 7647357 - MGP_129S1SvImJ_P0064676 Plekhf2 protein_coding protein_coding MGP_129S1SvImJ_T0064677.1 MGP_129S1SvImJ_G0028046.1 mouse_genomes_project 4 7628769 7647608 - MGP_129S1SvImJ_P0064677 Plekhf2 protein_coding protein_coding MGP_129S1SvImJ_T0014808.1 MGP_129S1SvImJ_G0012897.1 mouse_genomes_project 4 136531644 136531965 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067458.1 MGP_129S1SvImJ_G0028691.1 mouse_genomes_project 4 120387703 120416760 - AU022252 protein_coding processed_transcript MGP_129S1SvImJ_T0067460.1 MGP_129S1SvImJ_G0028691.1 mouse_genomes_project 4 120403962 120416764 - MGP_129S1SvImJ_P0067460 AU022252 protein_coding protein_coding MGP_129S1SvImJ_T0067461.1 MGP_129S1SvImJ_G0028691.1 mouse_genomes_project 4 120410442 120416730 - AU022252 protein_coding processed_transcript MGP_129S1SvImJ_T0067462.1 MGP_129S1SvImJ_G0028691.1 mouse_genomes_project 4 120410532 120416737 - AU022252 protein_coding processed_transcript MGP_129S1SvImJ_T0008012.1 MGP_129S1SvImJ_G0006539.1 mouse_genomes_project 4 139764063 139770048 - Gm13003 lincRNA lincRNA MGP_129S1SvImJ_T0067268.1 MGP_129S1SvImJ_G0028645.1 mouse_genomes_project 4 118087715 118092933 - MGP_129S1SvImJ_P0067268 Plk3 protein_coding protein_coding MGP_129S1SvImJ_T0067269.1 MGP_129S1SvImJ_G0028645.1 mouse_genomes_project 4 118087723 118093013 - Plk3 protein_coding processed_transcript MGP_129S1SvImJ_T0069830.1 MGP_129S1SvImJ_G0029227.1 mouse_genomes_project 4 160145153 160149292 - MGP_129S1SvImJ_P0069830 Tmem88b protein_coding protein_coding MGP_129S1SvImJ_T0004537.1 MGP_129S1SvImJ_G0003946.1 mouse_genomes_project 4 120104511 120105157 - Gm12863 antisense antisense MGP_129S1SvImJ_T0004594.1 MGP_129S1SvImJ_G0003992.1 mouse_genomes_project 4 145145042 145157457 + 4930455G09Rik antisense antisense MGP_129S1SvImJ_T0099876.1 MGP_129S1SvImJ_G0037943.1 mouse_genomes_project 4 134406116 134406250 - Rnu11 snRNA snRNA MGP_129S1SvImJ_T0065915.1 MGP_129S1SvImJ_G0028343.1 mouse_genomes_project 4 60792645 60800044 - MGP_129S1SvImJ_P0065915 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0069457.1 MGP_129S1SvImJ_G0029162.1 mouse_genomes_project 4 155076786 155088746 - MGP_129S1SvImJ_P0069457 Vamp3 protein_coding protein_coding MGP_129S1SvImJ_T0069458.1 MGP_129S1SvImJ_G0029162.1 mouse_genomes_project 4 155080249 155088739 - Vamp3 protein_coding retained_intron MGP_129S1SvImJ_T0069459.1 MGP_129S1SvImJ_G0029162.1 mouse_genomes_project 4 155086516 155088756 - Vamp3 protein_coding retained_intron MGP_129S1SvImJ_T0067922.1 MGP_129S1SvImJ_G0028809.1 mouse_genomes_project 4 130773546 130807207 - MGP_129S1SvImJ_P0067922 Azin2 protein_coding protein_coding MGP_129S1SvImJ_T0067923.1 MGP_129S1SvImJ_G0028809.1 mouse_genomes_project 4 130775211 130807215 - MGP_129S1SvImJ_P0067923 Azin2 protein_coding protein_coding MGP_129S1SvImJ_T0067924.1 MGP_129S1SvImJ_G0028809.1 mouse_genomes_project 4 130775211 130807226 - MGP_129S1SvImJ_P0067924 Azin2 protein_coding protein_coding MGP_129S1SvImJ_T0067925.1 MGP_129S1SvImJ_G0028809.1 mouse_genomes_project 4 130788877 130807226 - Azin2 protein_coding retained_intron MGP_129S1SvImJ_T0067926.1 MGP_129S1SvImJ_G0028809.1 mouse_genomes_project 4 130789319 130806191 - MGP_129S1SvImJ_P0067926 Azin2 protein_coding protein_coding MGP_129S1SvImJ_T0067927.1 MGP_129S1SvImJ_G0028809.1 mouse_genomes_project 4 130790417 130807229 - Azin2 protein_coding retained_intron MGP_129S1SvImJ_T0067928.1 MGP_129S1SvImJ_G0028809.1 mouse_genomes_project 4 130805497 130807215 - Azin2 protein_coding retained_intron MGP_129S1SvImJ_T0067709.1 MGP_129S1SvImJ_G0028756.1 mouse_genomes_project 4 126410080 126414390 + MGP_129S1SvImJ_P0067709 Yrdc protein_coding protein_coding MGP_129S1SvImJ_T0067710.1 MGP_129S1SvImJ_G0028756.1 mouse_genomes_project 4 126411211 126414033 + Yrdc protein_coding retained_intron MGP_129S1SvImJ_T0067749.1 MGP_129S1SvImJ_G0028769.1 mouse_genomes_project 4 127706134 127743104 + MGP_129S1SvImJ_P0067749 Oscp1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0067750.1 MGP_129S1SvImJ_G0028769.1 mouse_genomes_project 4 127706372 127743096 + MGP_129S1SvImJ_P0067750 Oscp1 protein_coding protein_coding MGP_129S1SvImJ_T0067751.1 MGP_129S1SvImJ_G0028769.1 mouse_genomes_project 4 127715557 127739338 + Oscp1 protein_coding processed_transcript MGP_129S1SvImJ_T0067752.1 MGP_129S1SvImJ_G0028769.1 mouse_genomes_project 4 127732736 127734232 + Oscp1 protein_coding processed_transcript MGP_129S1SvImJ_T0067753.1 MGP_129S1SvImJ_G0028769.1 mouse_genomes_project 4 127738575 127739556 + Oscp1 protein_coding processed_transcript MGP_129S1SvImJ_T0069238.1 MGP_129S1SvImJ_G0029122.1 mouse_genomes_project 4 151941581 151992460 - MGP_129S1SvImJ_P0069238 Ptchd2 protein_coding protein_coding MGP_129S1SvImJ_T0069239.1 MGP_129S1SvImJ_G0029122.1 mouse_genomes_project 4 151962816 151965445 - Ptchd2 protein_coding retained_intron MGP_129S1SvImJ_T0069240.1 MGP_129S1SvImJ_G0029122.1 mouse_genomes_project 4 151964484 151965925 - Ptchd2 protein_coding processed_transcript MGP_129S1SvImJ_T0064670.1 MGP_129S1SvImJ_G0028044.1 mouse_genomes_project 4 7485428 7487143 + MGP_129S1SvImJ_P0064670 protein_coding protein_coding MGP_129S1SvImJ_T0066278.1 MGP_129S1SvImJ_G0028424.1 mouse_genomes_project 4 88460043 88460616 - MGP_129S1SvImJ_P0066278 Ifna9 protein_coding protein_coding MGP_129S1SvImJ_T0068287.1 MGP_129S1SvImJ_G0028875.1 mouse_genomes_project 4 134734679 134755175 + MGP_129S1SvImJ_P0068287 Ptafr protein_coding protein_coding MGP_129S1SvImJ_T0065840.1 MGP_129S1SvImJ_G0028323.1 mouse_genomes_project 4 56856539 57035438 - MGP_129S1SvImJ_P0065840 Svep1 protein_coding protein_coding MGP_129S1SvImJ_T0065841.1 MGP_129S1SvImJ_G0028323.1 mouse_genomes_project 4 56965584 57035454 - Svep1 protein_coding processed_transcript MGP_129S1SvImJ_T0065842.1 MGP_129S1SvImJ_G0028323.1 mouse_genomes_project 4 56966947 57035700 - Svep1 protein_coding processed_transcript MGP_129S1SvImJ_T0065843.1 MGP_129S1SvImJ_G0028323.1 mouse_genomes_project 4 57003139 57035530 - Svep1 protein_coding processed_transcript MGP_129S1SvImJ_T0007905.1 MGP_129S1SvImJ_G0006466.1 mouse_genomes_project 4 94144859 94476209 - lincRNA lincRNA MGP_129S1SvImJ_T0067881.1 MGP_129S1SvImJ_G0028797.1 mouse_genomes_project 4 129075308 129079228 - MGP_129S1SvImJ_P0067881 Gjb3 protein_coding protein_coding MGP_129S1SvImJ_T0067882.1 MGP_129S1SvImJ_G0028797.1 mouse_genomes_project 4 129075308 129080911 - MGP_129S1SvImJ_P0067882 Gjb3 protein_coding protein_coding MGP_129S1SvImJ_T0065130.1 MGP_129S1SvImJ_G0028162.1 mouse_genomes_project 4 39443998 39451471 - MGP_129S1SvImJ_P0065130 AI464131 protein_coding protein_coding MGP_129S1SvImJ_T0065131.1 MGP_129S1SvImJ_G0028162.1 mouse_genomes_project 4 39447888 39451063 - MGP_129S1SvImJ_P0065131 AI464131 protein_coding protein_coding MGP_129S1SvImJ_T0067400.1 MGP_129S1SvImJ_G0028668.1 mouse_genomes_project 4 119489835 119494287 - MGP_129S1SvImJ_P0067400 Cdc20 protein_coding protein_coding MGP_129S1SvImJ_T0067401.1 MGP_129S1SvImJ_G0028668.1 mouse_genomes_project 4 119490039 119493513 - MGP_129S1SvImJ_P0067401 Cdc20 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067402.1 MGP_129S1SvImJ_G0028668.1 mouse_genomes_project 4 119490482 119492756 - Cdc20 protein_coding retained_intron MGP_129S1SvImJ_T0068492.1 MGP_129S1SvImJ_G0028921.1 mouse_genomes_project 4 136588316 136591310 - MGP_129S1SvImJ_P0068492 Grrp1 protein_coding protein_coding MGP_129S1SvImJ_T0068493.1 MGP_129S1SvImJ_G0028921.1 mouse_genomes_project 4 136588912 136590226 - Grrp1 protein_coding processed_transcript MGP_129S1SvImJ_T0014821.1 MGP_129S1SvImJ_G0012910.1 mouse_genomes_project 4 138851086 138851609 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001451.1 MGP_129S1SvImJ_G0001372.1 mouse_genomes_project 4 153994679 153997106 + TEC TEC MGP_129S1SvImJ_T0065667.1 MGP_129S1SvImJ_G0028273.1 mouse_genomes_project 4 46699420 46725128 + Invs protein_coding processed_transcript MGP_129S1SvImJ_T0065668.1 MGP_129S1SvImJ_G0028273.1 mouse_genomes_project 4 46699460 46700708 + Invs protein_coding processed_transcript MGP_129S1SvImJ_T0065669.1 MGP_129S1SvImJ_G0028273.1 mouse_genomes_project 4 46699462 46856773 + MGP_129S1SvImJ_P0065669 Invs protein_coding protein_coding MGP_129S1SvImJ_T0065670.1 MGP_129S1SvImJ_G0028273.1 mouse_genomes_project 4 46699476 46706865 + Invs protein_coding processed_transcript MGP_129S1SvImJ_T0065671.1 MGP_129S1SvImJ_G0028273.1 mouse_genomes_project 4 46699486 46852170 + MGP_129S1SvImJ_P0065671 Invs protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065672.1 MGP_129S1SvImJ_G0028273.1 mouse_genomes_project 4 46804876 46819969 + Invs protein_coding processed_transcript MGP_129S1SvImJ_T0004543.1 MGP_129S1SvImJ_G0003952.1 mouse_genomes_project 4 125135419 125138253 + Gm12925 antisense antisense MGP_129S1SvImJ_T0004544.1 MGP_129S1SvImJ_G0003952.1 mouse_genomes_project 4 125136992 125140734 + Gm12925 antisense antisense MGP_129S1SvImJ_T0004545.1 MGP_129S1SvImJ_G0003952.1 mouse_genomes_project 4 125137154 125140741 + Gm12925 antisense antisense MGP_129S1SvImJ_T0014726.1 MGP_129S1SvImJ_G0012815.1 mouse_genomes_project 4 109225389 109225771 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010667.1 MGP_129S1SvImJ_G0008783.1 mouse_genomes_project 4 144396393 144396470 + Gm25690 miRNA miRNA MGP_129S1SvImJ_T0065213.1 MGP_129S1SvImJ_G0028188.1 mouse_genomes_project 4 40692766 40693521 + MGP_129S1SvImJ_P0065213 Ccl27b protein_coding protein_coding MGP_129S1SvImJ_T0014660.1 MGP_129S1SvImJ_G0012749.1 mouse_genomes_project 4 87996247 87996522 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014501.1 MGP_129S1SvImJ_G0012590.1 mouse_genomes_project 4 29652133 29653077 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067024.1 MGP_129S1SvImJ_G0028591.1 mouse_genomes_project 4 115684385 115685252 - MGP_129S1SvImJ_P0067024 Foxe3 protein_coding protein_coding MGP_129S1SvImJ_T0064630.1 MGP_129S1SvImJ_G0028038.1 mouse_genomes_project 4 4705770 4815835 - MGP_129S1SvImJ_P0064630 Car8 protein_coding protein_coding MGP_129S1SvImJ_T0069140.1 MGP_129S1SvImJ_G0029092.1 mouse_genomes_project 4 147820920 147821229 - MGP_129S1SvImJ_P0069140 Gm9944 protein_coding protein_coding MGP_129S1SvImJ_T0010603.1 MGP_129S1SvImJ_G0008719.1 mouse_genomes_project 4 38910766 38910830 + Mir3094 miRNA miRNA MGP_129S1SvImJ_T0065747.1 MGP_129S1SvImJ_G0028298.1 mouse_genomes_project 4 51642217 51779143 - MGP_129S1SvImJ_P0065747 Abca1 protein_coding protein_coding MGP_129S1SvImJ_T0065748.1 MGP_129S1SvImJ_G0028298.1 mouse_genomes_project 4 51646918 51652357 - Abca1 protein_coding processed_transcript MGP_129S1SvImJ_T0010596.1 MGP_129S1SvImJ_G0008712.1 mouse_genomes_project 4 34319582 34319663 - Mir876 miRNA miRNA MGP_129S1SvImJ_T0101118.1 MGP_129S1SvImJ_G0039185.1 mouse_genomes_project 4 55521941 55522061 - Gm22952 snoRNA snoRNA MGP_129S1SvImJ_T0067811.1 MGP_129S1SvImJ_G0028781.1 mouse_genomes_project 4 128116776 128150339 - MGP_129S1SvImJ_P0067811 Ago1 protein_coding protein_coding MGP_129S1SvImJ_T0067812.1 MGP_129S1SvImJ_G0028781.1 mouse_genomes_project 4 128120085 128143538 - MGP_129S1SvImJ_P0067812 Ago1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067813.1 MGP_129S1SvImJ_G0028781.1 mouse_genomes_project 4 128121267 128140963 - MGP_129S1SvImJ_P0067813 Ago1 protein_coding protein_coding MGP_129S1SvImJ_T0067814.1 MGP_129S1SvImJ_G0028781.1 mouse_genomes_project 4 128124364 128125126 - Ago1 protein_coding retained_intron MGP_129S1SvImJ_T0067815.1 MGP_129S1SvImJ_G0028781.1 mouse_genomes_project 4 128141070 128141881 - Ago1 protein_coding retained_intron MGP_129S1SvImJ_T0069315.1 MGP_129S1SvImJ_G0029136.1 mouse_genomes_project 4 152968416 152985106 - MGP_129S1SvImJ_P0069315 Pgd protein_coding protein_coding MGP_129S1SvImJ_T0069316.1 MGP_129S1SvImJ_G0029136.1 mouse_genomes_project 4 152973591 152978399 - Pgd protein_coding retained_intron MGP_129S1SvImJ_T0069317.1 MGP_129S1SvImJ_G0029136.1 mouse_genomes_project 4 152978326 152985170 - Pgd protein_coding retained_intron MGP_129S1SvImJ_T0069318.1 MGP_129S1SvImJ_G0029136.1 mouse_genomes_project 4 152978692 152980054 - Pgd protein_coding retained_intron MGP_129S1SvImJ_T0069319.1 MGP_129S1SvImJ_G0029136.1 mouse_genomes_project 4 152979783 152985059 - Pgd protein_coding retained_intron MGP_129S1SvImJ_T0098712.1 MGP_129S1SvImJ_G0036797.1 mouse_genomes_project 4 18313325 18313681 + Gm22817 ribozyme ribozyme MGP_129S1SvImJ_T0010638.1 MGP_129S1SvImJ_G0008754.1 mouse_genomes_project 4 126278115 126278224 + Mir697 miRNA miRNA MGP_129S1SvImJ_T0067591.1 MGP_129S1SvImJ_G0028722.1 mouse_genomes_project 4 122462474 122514208 - MGP_129S1SvImJ_P0067591 Rlf protein_coding protein_coding MGP_129S1SvImJ_T0067592.1 MGP_129S1SvImJ_G0028722.1 mouse_genomes_project 4 122462985 122541624 - MGP_129S1SvImJ_P0067592 Rlf protein_coding protein_coding MGP_129S1SvImJ_T0067593.1 MGP_129S1SvImJ_G0028722.1 mouse_genomes_project 4 122493864 122514208 - MGP_129S1SvImJ_P0067593 Rlf protein_coding protein_coding MGP_129S1SvImJ_T0067672.1 MGP_129S1SvImJ_G0028745.1 mouse_genomes_project 4 125390665 125396831 + MGP_129S1SvImJ_P0067672 Mycbp protein_coding protein_coding MGP_129S1SvImJ_T0067673.1 MGP_129S1SvImJ_G0028745.1 mouse_genomes_project 4 125390755 125396892 + MGP_129S1SvImJ_P0067673 Mycbp protein_coding protein_coding MGP_129S1SvImJ_T0067674.1 MGP_129S1SvImJ_G0028745.1 mouse_genomes_project 4 125390792 125395489 + Mycbp protein_coding processed_transcript MGP_129S1SvImJ_T0067675.1 MGP_129S1SvImJ_G0028745.1 mouse_genomes_project 4 125390887 125396997 + Mycbp protein_coding processed_transcript MGP_129S1SvImJ_T0101149.1 MGP_129S1SvImJ_G0039216.1 mouse_genomes_project 4 119190777 119190881 + Gm23382 snoRNA snoRNA MGP_129S1SvImJ_T0067995.1 MGP_129S1SvImJ_G0028823.1 mouse_genomes_project 4 131385324 131411847 + MGP_129S1SvImJ_P0067995 Bsdc1 protein_coding protein_coding MGP_129S1SvImJ_T0067996.1 MGP_129S1SvImJ_G0028823.1 mouse_genomes_project 4 131385415 131390746 + Bsdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0067997.1 MGP_129S1SvImJ_G0028823.1 mouse_genomes_project 4 131385427 131393925 + Bsdc1 protein_coding retained_intron MGP_129S1SvImJ_T0067998.1 MGP_129S1SvImJ_G0028823.1 mouse_genomes_project 4 131385427 131390734 + Bsdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0067999.1 MGP_129S1SvImJ_G0028823.1 mouse_genomes_project 4 131385430 131389719 + Bsdc1 protein_coding retained_intron MGP_129S1SvImJ_T0068000.1 MGP_129S1SvImJ_G0028823.1 mouse_genomes_project 4 131385579 131390746 + MGP_129S1SvImJ_P0068000 Bsdc1 protein_coding protein_coding MGP_129S1SvImJ_T0068001.1 MGP_129S1SvImJ_G0028823.1 mouse_genomes_project 4 131388299 131389298 + Bsdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0068002.1 MGP_129S1SvImJ_G0028823.1 mouse_genomes_project 4 131395640 131397486 + Bsdc1 protein_coding retained_intron MGP_129S1SvImJ_T0066027.1 MGP_129S1SvImJ_G0028373.1 mouse_genomes_project 4 62755542 62774122 - MGP_129S1SvImJ_P0066027 Tnfsf15 protein_coding protein_coding MGP_129S1SvImJ_T0064626.1 MGP_129S1SvImJ_G0028037.1 mouse_genomes_project 4 3204613 3524698 - MGP_129S1SvImJ_P0064626 Tox protein_coding protein_coding MGP_129S1SvImJ_T0064627.1 MGP_129S1SvImJ_G0028037.1 mouse_genomes_project 4 3207242 3208548 - Tox protein_coding processed_transcript MGP_129S1SvImJ_T0064628.1 MGP_129S1SvImJ_G0028037.1 mouse_genomes_project 4 3263939 3525456 - Tox protein_coding retained_intron MGP_129S1SvImJ_T0064629.1 MGP_129S1SvImJ_G0028037.1 mouse_genomes_project 4 3350346 3524345 - Tox protein_coding retained_intron MGP_129S1SvImJ_T0102546.1 MGP_129S1SvImJ_G0040379.1 mouse_genomes_project 4 124116866 124121353 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0014713.1 MGP_129S1SvImJ_G0012802.1 mouse_genomes_project 4 105924336 105924761 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065407.1 MGP_129S1SvImJ_G0028217.1 mouse_genomes_project 4 41765036 41784472 + MGP_129S1SvImJ_P0065407 Npr2 protein_coding protein_coding MGP_129S1SvImJ_T0065408.1 MGP_129S1SvImJ_G0028217.1 mouse_genomes_project 4 41765286 41784472 + MGP_129S1SvImJ_P0065408 Npr2 protein_coding protein_coding MGP_129S1SvImJ_T0065409.1 MGP_129S1SvImJ_G0028217.1 mouse_genomes_project 4 41774323 41784472 + Npr2 protein_coding processed_transcript MGP_129S1SvImJ_T0065410.1 MGP_129S1SvImJ_G0028217.1 mouse_genomes_project 4 41774462 41776306 + Npr2 protein_coding processed_transcript MGP_129S1SvImJ_T0065411.1 MGP_129S1SvImJ_G0028217.1 mouse_genomes_project 4 41774469 41777601 + MGP_129S1SvImJ_P0065411 Npr2 protein_coding protein_coding MGP_129S1SvImJ_T0065412.1 MGP_129S1SvImJ_G0028217.1 mouse_genomes_project 4 41774491 41784472 + MGP_129S1SvImJ_P0065412 Npr2 protein_coding protein_coding MGP_129S1SvImJ_T0065413.1 MGP_129S1SvImJ_G0028217.1 mouse_genomes_project 4 41777357 41781400 + Npr2 protein_coding processed_transcript MGP_129S1SvImJ_T0065414.1 MGP_129S1SvImJ_G0028217.1 mouse_genomes_project 4 41779781 41783537 + Npr2 protein_coding processed_transcript MGP_129S1SvImJ_T0065415.1 MGP_129S1SvImJ_G0028217.1 mouse_genomes_project 4 41780418 41781627 + Npr2 protein_coding processed_transcript MGP_129S1SvImJ_T0065416.1 MGP_129S1SvImJ_G0028217.1 mouse_genomes_project 4 41781226 41783458 + Npr2 protein_coding processed_transcript MGP_129S1SvImJ_T0069000.1 MGP_129S1SvImJ_G0029042.1 mouse_genomes_project 4 144269938 144276864 + MGP_129S1SvImJ_P0069000 Arhgef19 protein_coding protein_coding MGP_129S1SvImJ_T0069001.1 MGP_129S1SvImJ_G0029042.1 mouse_genomes_project 4 144270089 144277939 + Arhgef19 protein_coding retained_intron MGP_129S1SvImJ_T0069002.1 MGP_129S1SvImJ_G0029042.1 mouse_genomes_project 4 144273305 144276808 + MGP_129S1SvImJ_P0069002 Arhgef19 protein_coding protein_coding MGP_129S1SvImJ_T0069003.1 MGP_129S1SvImJ_G0029042.1 mouse_genomes_project 4 144273319 144290357 + MGP_129S1SvImJ_P0069003 Arhgef19 protein_coding protein_coding MGP_129S1SvImJ_T0069004.1 MGP_129S1SvImJ_G0029042.1 mouse_genomes_project 4 144273343 144277450 + MGP_129S1SvImJ_P0069004 Arhgef19 protein_coding protein_coding MGP_129S1SvImJ_T0069005.1 MGP_129S1SvImJ_G0029042.1 mouse_genomes_project 4 144275870 144277893 + MGP_129S1SvImJ_P0069005 Arhgef19 protein_coding protein_coding MGP_129S1SvImJ_T0069006.1 MGP_129S1SvImJ_G0029042.1 mouse_genomes_project 4 144276847 144278558 + MGP_129S1SvImJ_P0069006 Arhgef19 protein_coding protein_coding MGP_129S1SvImJ_T0069007.1 MGP_129S1SvImJ_G0029042.1 mouse_genomes_project 4 144277374 144278425 + Arhgef19 protein_coding retained_intron MGP_129S1SvImJ_T0014537.1 MGP_129S1SvImJ_G0012626.1 mouse_genomes_project 4 39184460 39184688 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007843.1 MGP_129S1SvImJ_G0006415.1 mouse_genomes_project 4 41869016 41873526 + lincRNA lincRNA MGP_129S1SvImJ_T0004580.1 MGP_129S1SvImJ_G0003980.1 mouse_genomes_project 4 141129898 141132488 + AB041806 antisense antisense MGP_129S1SvImJ_T0099845.1 MGP_129S1SvImJ_G0037912.1 mouse_genomes_project 4 95599038 95599199 + Gm25004 snRNA snRNA MGP_129S1SvImJ_T0014711.1 MGP_129S1SvImJ_G0012800.1 mouse_genomes_project 4 104425779 104426762 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014746.1 MGP_129S1SvImJ_G0012835.1 mouse_genomes_project 4 117776667 117776980 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014788.1 MGP_129S1SvImJ_G0012877.1 mouse_genomes_project 4 128208172 128208515 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064717.1 MGP_129S1SvImJ_G0028053.1 mouse_genomes_project 4 8152354 8220200 + MGP_129S1SvImJ_P0064717 1110037F02Rik protein_coding protein_coding MGP_129S1SvImJ_T0064718.1 MGP_129S1SvImJ_G0028053.1 mouse_genomes_project 4 8152354 8195628 + MGP_129S1SvImJ_P0064718 1110037F02Rik protein_coding protein_coding MGP_129S1SvImJ_T0064719.1 MGP_129S1SvImJ_G0028053.1 mouse_genomes_project 4 8152439 8220200 + MGP_129S1SvImJ_P0064719 1110037F02Rik protein_coding protein_coding MGP_129S1SvImJ_T0066869.1 MGP_129S1SvImJ_G0028560.1 mouse_genomes_project 4 109469928 109534568 + MGP_129S1SvImJ_P0066869 3110021N24Rik protein_coding protein_coding MGP_129S1SvImJ_T0014764.1 MGP_129S1SvImJ_G0012853.1 mouse_genomes_project 4 120724068 120724445 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068491.1 MGP_129S1SvImJ_G0028920.1 mouse_genomes_project 4 136584152 136587249 + MGP_129S1SvImJ_P0068491 Gm30191 protein_coding protein_coding MGP_129S1SvImJ_T0008044.1 MGP_129S1SvImJ_G0006570.1 mouse_genomes_project 4 159130077 159131597 + lincRNA lincRNA MGP_129S1SvImJ_T0065644.1 MGP_129S1SvImJ_G0028267.1 mouse_genomes_project 4 45733277 45792095 + MGP_129S1SvImJ_P0065644 Tgfbr1 protein_coding protein_coding MGP_129S1SvImJ_T0065645.1 MGP_129S1SvImJ_G0028267.1 mouse_genomes_project 4 45733282 45794892 + MGP_129S1SvImJ_P0065645 Tgfbr1 protein_coding protein_coding MGP_129S1SvImJ_T0065646.1 MGP_129S1SvImJ_G0028267.1 mouse_genomes_project 4 45733568 45741284 + Tgfbr1 protein_coding processed_transcript MGP_129S1SvImJ_T0065647.1 MGP_129S1SvImJ_G0028267.1 mouse_genomes_project 4 45766193 45790997 + MGP_129S1SvImJ_P0065647 Tgfbr1 protein_coding protein_coding MGP_129S1SvImJ_T0069788.1 MGP_129S1SvImJ_G0029217.1 mouse_genomes_project 4 159944438 159969189 + MGP_129S1SvImJ_P0069788 Slc35e2 protein_coding protein_coding MGP_129S1SvImJ_T0069789.1 MGP_129S1SvImJ_G0029217.1 mouse_genomes_project 4 159944633 159964044 + MGP_129S1SvImJ_P0069789 Slc35e2 protein_coding protein_coding MGP_129S1SvImJ_T0069790.1 MGP_129S1SvImJ_G0029217.1 mouse_genomes_project 4 159944965 159963273 + MGP_129S1SvImJ_P0069790 Slc35e2 protein_coding protein_coding MGP_129S1SvImJ_T0069791.1 MGP_129S1SvImJ_G0029217.1 mouse_genomes_project 4 159953222 159963150 + Slc35e2 protein_coding processed_transcript MGP_129S1SvImJ_T0014442.1 MGP_129S1SvImJ_G0012531.1 mouse_genomes_project 4 13288943 13290163 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068098.1 MGP_129S1SvImJ_G0028841.1 mouse_genomes_project 4 131963233 132003813 + MGP_129S1SvImJ_P0068098 Adgrb2 protein_coding protein_coding MGP_129S1SvImJ_T0068099.1 MGP_129S1SvImJ_G0028841.1 mouse_genomes_project 4 131963329 132003813 + MGP_129S1SvImJ_P0068099 Adgrb2 protein_coding protein_coding MGP_129S1SvImJ_T0068100.1 MGP_129S1SvImJ_G0028841.1 mouse_genomes_project 4 131963433 132003813 + MGP_129S1SvImJ_P0068100 Adgrb2 protein_coding protein_coding MGP_129S1SvImJ_T0068101.1 MGP_129S1SvImJ_G0028841.1 mouse_genomes_project 4 131970220 132003813 + MGP_129S1SvImJ_P0068101 Adgrb2 protein_coding protein_coding MGP_129S1SvImJ_T0068102.1 MGP_129S1SvImJ_G0028841.1 mouse_genomes_project 4 131970221 132003519 + MGP_129S1SvImJ_P0068102 Adgrb2 protein_coding protein_coding MGP_129S1SvImJ_T0068103.1 MGP_129S1SvImJ_G0028841.1 mouse_genomes_project 4 131970221 132003519 + MGP_129S1SvImJ_P0068103 Adgrb2 protein_coding protein_coding MGP_129S1SvImJ_T0068104.1 MGP_129S1SvImJ_G0028841.1 mouse_genomes_project 4 131970221 132003519 + MGP_129S1SvImJ_P0068104 Adgrb2 protein_coding protein_coding MGP_129S1SvImJ_T0068105.1 MGP_129S1SvImJ_G0028841.1 mouse_genomes_project 4 131989526 131993047 + Adgrb2 protein_coding retained_intron MGP_129S1SvImJ_T0068106.1 MGP_129S1SvImJ_G0028841.1 mouse_genomes_project 4 131989719 131993727 + Adgrb2 protein_coding retained_intron MGP_129S1SvImJ_T0068107.1 MGP_129S1SvImJ_G0028841.1 mouse_genomes_project 4 131993381 131993758 + Adgrb2 protein_coding retained_intron MGP_129S1SvImJ_T0068108.1 MGP_129S1SvImJ_G0028841.1 mouse_genomes_project 4 131994820 131995766 + Adgrb2 protein_coding retained_intron MGP_129S1SvImJ_T0068109.1 MGP_129S1SvImJ_G0028841.1 mouse_genomes_project 4 131999957 132002744 + Adgrb2 protein_coding retained_intron MGP_129S1SvImJ_T0068110.1 MGP_129S1SvImJ_G0028841.1 mouse_genomes_project 4 132002295 132003611 + Adgrb2 protein_coding retained_intron MGP_129S1SvImJ_T0010637.1 MGP_129S1SvImJ_G0008753.1 mouse_genomes_project 4 125081323 125081425 + Mir6398 miRNA miRNA MGP_129S1SvImJ_T0018090.1 MGP_129S1SvImJ_G0015551.1 mouse_genomes_project 4 73020751 73027838 + Gm11240 processed_transcript processed_transcript MGP_129S1SvImJ_T0101096.1 MGP_129S1SvImJ_G0039163.1 mouse_genomes_project 4 22619400 22619525 - Gm25975 snoRNA snoRNA MGP_129S1SvImJ_T0014797.1 MGP_129S1SvImJ_G0012886.1 mouse_genomes_project 4 130707132 130709455 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004612.1 MGP_129S1SvImJ_G0004004.1 mouse_genomes_project 4 153187833 153206299 + Ube4bos1 antisense antisense MGP_129S1SvImJ_T0004613.1 MGP_129S1SvImJ_G0004004.1 mouse_genomes_project 4 153187862 153200405 + Ube4bos1 antisense antisense MGP_129S1SvImJ_T0067991.1 MGP_129S1SvImJ_G0028822.1 mouse_genomes_project 4 131348674 131363863 - MGP_129S1SvImJ_P0067991 Zbtb8b protein_coding protein_coding MGP_129S1SvImJ_T0067992.1 MGP_129S1SvImJ_G0028822.1 mouse_genomes_project 4 131348674 131363828 - MGP_129S1SvImJ_P0067992 Zbtb8b protein_coding protein_coding MGP_129S1SvImJ_T0067993.1 MGP_129S1SvImJ_G0028822.1 mouse_genomes_project 4 131349231 131355562 - Zbtb8b protein_coding processed_transcript MGP_129S1SvImJ_T0067994.1 MGP_129S1SvImJ_G0028822.1 mouse_genomes_project 4 131352177 131363830 - Zbtb8b protein_coding retained_intron MGP_129S1SvImJ_T0014630.1 MGP_129S1SvImJ_G0012719.1 mouse_genomes_project 4 75195434 75196330 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065486.1 MGP_129S1SvImJ_G0028235.1 mouse_genomes_project 4 42708806 42896188 - MGP_129S1SvImJ_P0065486 Pax5 protein_coding protein_coding MGP_129S1SvImJ_T0065487.1 MGP_129S1SvImJ_G0028235.1 mouse_genomes_project 4 42715194 42896119 - MGP_129S1SvImJ_P0065487 Pax5 protein_coding protein_coding MGP_129S1SvImJ_T0065488.1 MGP_129S1SvImJ_G0028235.1 mouse_genomes_project 4 42715194 42896119 - MGP_129S1SvImJ_P0065488 Pax5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065489.1 MGP_129S1SvImJ_G0028235.1 mouse_genomes_project 4 42715194 42896119 - MGP_129S1SvImJ_P0065489 Pax5 protein_coding protein_coding MGP_129S1SvImJ_T0065490.1 MGP_129S1SvImJ_G0028235.1 mouse_genomes_project 4 42715194 42896119 - MGP_129S1SvImJ_P0065490 Pax5 protein_coding protein_coding MGP_129S1SvImJ_T0065491.1 MGP_129S1SvImJ_G0028235.1 mouse_genomes_project 4 42715194 42896119 - MGP_129S1SvImJ_P0065491 Pax5 protein_coding protein_coding MGP_129S1SvImJ_T0065492.1 MGP_129S1SvImJ_G0028235.1 mouse_genomes_project 4 42715546 42896109 - MGP_129S1SvImJ_P0065492 Pax5 protein_coding protein_coding MGP_129S1SvImJ_T0065493.1 MGP_129S1SvImJ_G0028235.1 mouse_genomes_project 4 42715546 42896109 - MGP_129S1SvImJ_P0065493 Pax5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065494.1 MGP_129S1SvImJ_G0028235.1 mouse_genomes_project 4 42715546 42896109 - MGP_129S1SvImJ_P0065494 Pax5 protein_coding protein_coding MGP_129S1SvImJ_T0065495.1 MGP_129S1SvImJ_G0028235.1 mouse_genomes_project 4 42715546 42896109 - MGP_129S1SvImJ_P0065495 Pax5 protein_coding protein_coding MGP_129S1SvImJ_T0065496.1 MGP_129S1SvImJ_G0028235.1 mouse_genomes_project 4 42715546 42896109 - MGP_129S1SvImJ_P0065496 Pax5 protein_coding protein_coding MGP_129S1SvImJ_T0065497.1 MGP_129S1SvImJ_G0028235.1 mouse_genomes_project 4 42715546 42896109 - MGP_129S1SvImJ_P0065497 Pax5 protein_coding protein_coding MGP_129S1SvImJ_T0065498.1 MGP_129S1SvImJ_G0028235.1 mouse_genomes_project 4 42715546 42896109 - MGP_129S1SvImJ_P0065498 Pax5 protein_coding protein_coding MGP_129S1SvImJ_T0065499.1 MGP_129S1SvImJ_G0028235.1 mouse_genomes_project 4 42715553 42831526 - MGP_129S1SvImJ_P0065499 Pax5 protein_coding protein_coding MGP_129S1SvImJ_T0065500.1 MGP_129S1SvImJ_G0028235.1 mouse_genomes_project 4 42752729 42869532 - Pax5 protein_coding processed_transcript MGP_129S1SvImJ_T0065501.1 MGP_129S1SvImJ_G0028235.1 mouse_genomes_project 4 42865156 42889707 - MGP_129S1SvImJ_P0065501 Pax5 protein_coding protein_coding MGP_129S1SvImJ_T0065502.1 MGP_129S1SvImJ_G0028235.1 mouse_genomes_project 4 42865170 42889114 - Pax5 protein_coding processed_transcript MGP_129S1SvImJ_T0065503.1 MGP_129S1SvImJ_G0028235.1 mouse_genomes_project 4 42865170 42889114 - Pax5 protein_coding processed_transcript MGP_129S1SvImJ_T0065504.1 MGP_129S1SvImJ_G0028235.1 mouse_genomes_project 4 42865170 42889114 - Pax5 protein_coding processed_transcript MGP_129S1SvImJ_T0065505.1 MGP_129S1SvImJ_G0028235.1 mouse_genomes_project 4 42865170 42889114 - MGP_129S1SvImJ_P0065505 Pax5 protein_coding protein_coding MGP_129S1SvImJ_T0064631.1 MGP_129S1SvImJ_G0028039.1 mouse_genomes_project 4 5105770 5184654 + MGP_129S1SvImJ_P0064631 Rab2a protein_coding protein_coding MGP_129S1SvImJ_T0008004.1 MGP_129S1SvImJ_G0006534.1 mouse_genomes_project 4 137527519 137529746 - Gm16225 lincRNA lincRNA MGP_129S1SvImJ_T0069133.1 MGP_129S1SvImJ_G0029087.1 mouse_genomes_project 4 147718451 147721934 + MGP_129S1SvImJ_P0069133 protein_coding protein_coding MGP_129S1SvImJ_T0068949.1 MGP_129S1SvImJ_G0029030.1 mouse_genomes_project 4 143766195 143791879 - MGP_129S1SvImJ_P0068949 Padi3 protein_coding protein_coding MGP_129S1SvImJ_T0068950.1 MGP_129S1SvImJ_G0029030.1 mouse_genomes_project 4 143766199 143785214 - MGP_129S1SvImJ_P0068950 Padi3 protein_coding protein_coding MGP_129S1SvImJ_T0066914.1 MGP_129S1SvImJ_G0028568.1 mouse_genomes_project 4 109992093 110030099 + MGP_129S1SvImJ_P0066914 Calr4 protein_coding protein_coding MGP_129S1SvImJ_T0066915.1 MGP_129S1SvImJ_G0028568.1 mouse_genomes_project 4 110010755 110030349 + MGP_129S1SvImJ_P0066915 Calr4 protein_coding protein_coding MGP_129S1SvImJ_T0066916.1 MGP_129S1SvImJ_G0028568.1 mouse_genomes_project 4 110011902 110030349 + MGP_129S1SvImJ_P0066916 Calr4 protein_coding protein_coding MGP_129S1SvImJ_T0066917.1 MGP_129S1SvImJ_G0028568.1 mouse_genomes_project 4 110020854 110029921 + Calr4 protein_coding processed_transcript MGP_129S1SvImJ_T0065872.1 MGP_129S1SvImJ_G0028328.1 mouse_genomes_project 4 57815315 57834766 + MGP_129S1SvImJ_P0065872 Zkscan16 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0069612.1 MGP_129S1SvImJ_G0029188.1 mouse_genomes_project 4 158244225 158255804 + MGP_129S1SvImJ_P0069612 Lrrc47 protein_coding protein_coding MGP_129S1SvImJ_T0069613.1 MGP_129S1SvImJ_G0029188.1 mouse_genomes_project 4 158244297 158255803 + MGP_129S1SvImJ_P0069613 Lrrc47 protein_coding protein_coding MGP_129S1SvImJ_T0069614.1 MGP_129S1SvImJ_G0029188.1 mouse_genomes_project 4 158249916 158253390 + Lrrc47 protein_coding retained_intron MGP_129S1SvImJ_T0069615.1 MGP_129S1SvImJ_G0029188.1 mouse_genomes_project 4 158253272 158255182 + MGP_129S1SvImJ_P0069615 Lrrc47 protein_coding protein_coding MGP_129S1SvImJ_T0069616.1 MGP_129S1SvImJ_G0029188.1 mouse_genomes_project 4 158253958 158254958 + MGP_129S1SvImJ_P0069616 Lrrc47 protein_coding protein_coding MGP_129S1SvImJ_T0014835.1 MGP_129S1SvImJ_G0012924.1 mouse_genomes_project 4 146928025 146928741 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069136.1 MGP_129S1SvImJ_G0029089.1 mouse_genomes_project 4 147730847 147737035 - MGP_129S1SvImJ_P0069136 Gm13125 protein_coding protein_coding MGP_129S1SvImJ_T0014836.1 MGP_129S1SvImJ_G0012925.1 mouse_genomes_project 4 146935723 146936284 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007994.1 MGP_129S1SvImJ_G0006530.1 mouse_genomes_project 4 134448508 134450861 + Snhg12 lincRNA lincRNA MGP_129S1SvImJ_T0007995.1 MGP_129S1SvImJ_G0006530.1 mouse_genomes_project 4 134448508 134449804 + Snhg12 lincRNA lincRNA MGP_129S1SvImJ_T0007996.1 MGP_129S1SvImJ_G0006530.1 mouse_genomes_project 4 134448508 134450859 + Snhg12 lincRNA lincRNA MGP_129S1SvImJ_T0007997.1 MGP_129S1SvImJ_G0006530.1 mouse_genomes_project 4 134448523 134450596 + Snhg12 lincRNA lincRNA MGP_129S1SvImJ_T0007998.1 MGP_129S1SvImJ_G0006530.1 mouse_genomes_project 4 134449461 134450861 + Snhg12 lincRNA lincRNA MGP_129S1SvImJ_T0007999.1 MGP_129S1SvImJ_G0006530.1 mouse_genomes_project 4 134449650 134450832 + Snhg12 lincRNA lincRNA MGP_129S1SvImJ_T0008000.1 MGP_129S1SvImJ_G0006530.1 mouse_genomes_project 4 134450019 134450861 + Snhg12 lincRNA lincRNA MGP_129S1SvImJ_T0004466.1 MGP_129S1SvImJ_G0003894.1 mouse_genomes_project 4 43172835 43176163 + Gm12493 antisense antisense MGP_129S1SvImJ_T0067827.1 MGP_129S1SvImJ_G0028785.1 mouse_genomes_project 4 128384930 128417813 + MGP_129S1SvImJ_P0067827 Psmb2 protein_coding protein_coding MGP_129S1SvImJ_T0067828.1 MGP_129S1SvImJ_G0028785.1 mouse_genomes_project 4 128384979 128394586 + Psmb2 protein_coding processed_transcript MGP_129S1SvImJ_T0067829.1 MGP_129S1SvImJ_G0028785.1 mouse_genomes_project 4 128385004 128415861 + Psmb2 protein_coding processed_transcript MGP_129S1SvImJ_T0066870.1 MGP_129S1SvImJ_G0028561.1 mouse_genomes_project 4 109569579 109589907 - MGP_129S1SvImJ_P0066870 Btf3l4 protein_coding protein_coding MGP_129S1SvImJ_T0066871.1 MGP_129S1SvImJ_G0028561.1 mouse_genomes_project 4 109573889 109581258 - Btf3l4 protein_coding processed_transcript MGP_129S1SvImJ_T0066872.1 MGP_129S1SvImJ_G0028561.1 mouse_genomes_project 4 109580765 109586855 - Btf3l4 protein_coding processed_transcript MGP_129S1SvImJ_T0101135.1 MGP_129S1SvImJ_G0039202.1 mouse_genomes_project 4 89138055 89138195 - Gm26490 snoRNA snoRNA MGP_129S1SvImJ_T0004531.1 MGP_129S1SvImJ_G0003941.1 mouse_genomes_project 4 118271275 118273184 + Gm12843 antisense antisense MGP_129S1SvImJ_T0004532.1 MGP_129S1SvImJ_G0003941.1 mouse_genomes_project 4 118271602 118272832 + Gm12843 antisense antisense MGP_129S1SvImJ_T0067023.1 MGP_129S1SvImJ_G0028590.1 mouse_genomes_project 4 115662995 115665587 - MGP_129S1SvImJ_P0067023 Foxd2 protein_coding protein_coding MGP_129S1SvImJ_T0007887.1 MGP_129S1SvImJ_G0006452.1 mouse_genomes_project 4 81603972 81656632 + Gm5860 lincRNA lincRNA MGP_129S1SvImJ_T0007888.1 MGP_129S1SvImJ_G0006452.1 mouse_genomes_project 4 81604414 81606281 + Gm5860 lincRNA lincRNA MGP_129S1SvImJ_T0007889.1 MGP_129S1SvImJ_G0006452.1 mouse_genomes_project 4 81604498 81652959 + Gm5860 lincRNA lincRNA MGP_129S1SvImJ_T0007913.1 MGP_129S1SvImJ_G0006473.1 mouse_genomes_project 4 100290778 100304573 + Gm12702 lincRNA lincRNA MGP_129S1SvImJ_T0001453.1 MGP_129S1SvImJ_G0001374.1 mouse_genomes_project 4 156103902 156106762 - TEC TEC MGP_129S1SvImJ_T0069263.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152352513 152373805 - MGP_129S1SvImJ_P0069263 Tardbp protein_coding protein_coding MGP_129S1SvImJ_T0069264.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152352513 152373828 - MGP_129S1SvImJ_P0069264 Tardbp protein_coding protein_coding MGP_129S1SvImJ_T0069265.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152352513 152373805 - MGP_129S1SvImJ_P0069265 Tardbp protein_coding protein_coding MGP_129S1SvImJ_T0069266.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152352513 152373805 - MGP_129S1SvImJ_P0069266 Tardbp protein_coding protein_coding MGP_129S1SvImJ_T0069267.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152352518 152373571 - MGP_129S1SvImJ_P0069267 Tardbp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069268.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152352519 152356257 - Tardbp protein_coding processed_transcript MGP_129S1SvImJ_T0069269.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152352519 152362969 - MGP_129S1SvImJ_P0069269 Tardbp protein_coding protein_coding MGP_129S1SvImJ_T0069270.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152352616 152363478 - MGP_129S1SvImJ_P0069270 Tardbp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069271.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152355584 152362273 - Tardbp protein_coding processed_transcript MGP_129S1SvImJ_T0069272.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152355728 152357099 - Tardbp protein_coding processed_transcript MGP_129S1SvImJ_T0069273.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152355877 152357971 - Tardbp protein_coding processed_transcript MGP_129S1SvImJ_T0069274.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152356037 152373574 - MGP_129S1SvImJ_P0069274 Tardbp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069275.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152356754 152362565 - MGP_129S1SvImJ_P0069275 Tardbp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069276.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152356834 152366203 - MGP_129S1SvImJ_P0069276 Tardbp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069277.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152356839 152364892 - MGP_129S1SvImJ_P0069277 Tardbp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069278.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152356843 152373567 - MGP_129S1SvImJ_P0069278 Tardbp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069279.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152356843 152364887 - MGP_129S1SvImJ_P0069279 Tardbp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069280.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152356844 152363552 - MGP_129S1SvImJ_P0069280 Tardbp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069281.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152356844 152373567 - MGP_129S1SvImJ_P0069281 Tardbp protein_coding protein_coding MGP_129S1SvImJ_T0069282.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152356981 152364814 - MGP_129S1SvImJ_P0069282 Tardbp protein_coding protein_coding MGP_129S1SvImJ_T0069283.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152357164 152362878 - MGP_129S1SvImJ_P0069283 Tardbp protein_coding protein_coding MGP_129S1SvImJ_T0069284.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152357426 152363488 - MGP_129S1SvImJ_P0069284 Tardbp protein_coding protein_coding MGP_129S1SvImJ_T0069285.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152357569 152369602 - MGP_129S1SvImJ_P0069285 Tardbp protein_coding protein_coding MGP_129S1SvImJ_T0069286.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152357672 152369602 - MGP_129S1SvImJ_P0069286 Tardbp protein_coding protein_coding MGP_129S1SvImJ_T0069287.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152357672 152369602 - MGP_129S1SvImJ_P0069287 Tardbp protein_coding protein_coding MGP_129S1SvImJ_T0069288.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152357726 152366310 - MGP_129S1SvImJ_P0069288 Tardbp protein_coding protein_coding MGP_129S1SvImJ_T0069289.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152362232 152373579 - MGP_129S1SvImJ_P0069289 Tardbp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069290.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152362802 152373563 - MGP_129S1SvImJ_P0069290 Tardbp protein_coding protein_coding MGP_129S1SvImJ_T0069291.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152364889 152373135 - MGP_129S1SvImJ_P0069291 Tardbp protein_coding protein_coding MGP_129S1SvImJ_T0069292.1 MGP_129S1SvImJ_G0029129.1 mouse_genomes_project 4 152369324 152373567 - Tardbp protein_coding retained_intron MGP_129S1SvImJ_T0004456.1 MGP_129S1SvImJ_G0003885.1 mouse_genomes_project 4 38122605 38126591 + antisense antisense MGP_129S1SvImJ_T0101144.1 MGP_129S1SvImJ_G0039211.1 mouse_genomes_project 4 110313440 110313571 + Gm22497 snoRNA snoRNA MGP_129S1SvImJ_T0014818.1 MGP_129S1SvImJ_G0012907.1 mouse_genomes_project 4 138382883 138383097 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066396.1 MGP_129S1SvImJ_G0028468.1 mouse_genomes_project 4 97294031 97294358 - MGP_129S1SvImJ_P0066396 Gm10192 protein_coding protein_coding MGP_129S1SvImJ_T0068500.1 MGP_129S1SvImJ_G0028923.1 mouse_genomes_project 4 136659839 136674218 + MGP_129S1SvImJ_P0068500 Trim63 protein_coding protein_coding MGP_129S1SvImJ_T0068501.1 MGP_129S1SvImJ_G0028923.1 mouse_genomes_project 4 136659841 136674196 + MGP_129S1SvImJ_P0068501 Trim63 protein_coding protein_coding MGP_129S1SvImJ_T0068502.1 MGP_129S1SvImJ_G0028923.1 mouse_genomes_project 4 136659931 136662097 + Trim63 protein_coding retained_intron MGP_129S1SvImJ_T0068503.1 MGP_129S1SvImJ_G0028923.1 mouse_genomes_project 4 136664707 136674215 + Trim63 protein_coding processed_transcript MGP_129S1SvImJ_T0065717.1 MGP_129S1SvImJ_G0028287.1 mouse_genomes_project 4 48145644 48342381 - MGP_129S1SvImJ_P0065717 Grin3a protein_coding protein_coding MGP_129S1SvImJ_T0065718.1 MGP_129S1SvImJ_G0028287.1 mouse_genomes_project 4 48145644 48342381 - MGP_129S1SvImJ_P0065718 Grin3a protein_coding protein_coding MGP_129S1SvImJ_T0065720.1 MGP_129S1SvImJ_G0028287.1 mouse_genomes_project 4 48191715 48208324 - Grin3a protein_coding processed_transcript MGP_129S1SvImJ_T0065721.1 MGP_129S1SvImJ_G0028287.1 mouse_genomes_project 4 48259465 48342576 - Grin3a protein_coding processed_transcript MGP_129S1SvImJ_T0068969.1 MGP_129S1SvImJ_G0029036.1 mouse_genomes_project 4 144007846 144020451 - Crocc protein_coding retained_intron MGP_129S1SvImJ_T0068970.1 MGP_129S1SvImJ_G0029036.1 mouse_genomes_project 4 144007846 144013309 - Crocc protein_coding retained_intron MGP_129S1SvImJ_T0068971.1 MGP_129S1SvImJ_G0029036.1 mouse_genomes_project 4 144008193 144010016 - Crocc protein_coding retained_intron MGP_129S1SvImJ_T0068972.1 MGP_129S1SvImJ_G0029036.1 mouse_genomes_project 4 144008260 144048280 - MGP_129S1SvImJ_P0068972 Crocc protein_coding protein_coding MGP_129S1SvImJ_T0068973.1 MGP_129S1SvImJ_G0029036.1 mouse_genomes_project 4 144010940 144013701 - Crocc protein_coding retained_intron MGP_129S1SvImJ_T0068974.1 MGP_129S1SvImJ_G0029036.1 mouse_genomes_project 4 144012723 144013731 - Crocc protein_coding retained_intron MGP_129S1SvImJ_T0068975.1 MGP_129S1SvImJ_G0029036.1 mouse_genomes_project 4 144037994 144058657 - MGP_129S1SvImJ_P0068975 Crocc protein_coding protein_coding MGP_129S1SvImJ_T0068976.1 MGP_129S1SvImJ_G0029036.1 mouse_genomes_project 4 144039177 144056211 - Crocc protein_coding retained_intron MGP_129S1SvImJ_T0007836.1 MGP_129S1SvImJ_G0006408.1 mouse_genomes_project 4 36404435 36705181 - lincRNA lincRNA MGP_129S1SvImJ_T0067985.1 MGP_129S1SvImJ_G0028820.1 mouse_genomes_project 4 131237601 131262835 + MGP_129S1SvImJ_P0067985 Zbtb8os protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067986.1 MGP_129S1SvImJ_G0028820.1 mouse_genomes_project 4 131237905 131250727 + MGP_129S1SvImJ_P0067986 Zbtb8os protein_coding unknown_likely_coding MGP_129S1SvImJ_T0067987.1 MGP_129S1SvImJ_G0028820.1 mouse_genomes_project 4 131237910 131250323 + MGP_129S1SvImJ_P0067987 Zbtb8os protein_coding protein_coding MGP_129S1SvImJ_T0067988.1 MGP_129S1SvImJ_G0028820.1 mouse_genomes_project 4 131237945 131250421 + MGP_129S1SvImJ_P0067988 Zbtb8os protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067989.1 MGP_129S1SvImJ_G0028820.1 mouse_genomes_project 4 131247419 131250318 + Zbtb8os protein_coding retained_intron MGP_129S1SvImJ_T0065377.1 MGP_129S1SvImJ_G0028212.1 mouse_genomes_project 4 41652061 41681529 - MGP_129S1SvImJ_P0065377 Tln1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0065378.1 MGP_129S1SvImJ_G0028212.1 mouse_genomes_project 4 41652072 41684142 - MGP_129S1SvImJ_P0065378 Tln1 protein_coding protein_coding MGP_129S1SvImJ_T0065379.1 MGP_129S1SvImJ_G0028212.1 mouse_genomes_project 4 41667220 41669458 - MGP_129S1SvImJ_P0065379 Tln1 protein_coding protein_coding MGP_129S1SvImJ_T0065380.1 MGP_129S1SvImJ_G0028212.1 mouse_genomes_project 4 41668632 41673082 - MGP_129S1SvImJ_P0065380 Tln1 protein_coding protein_coding MGP_129S1SvImJ_T0065381.1 MGP_129S1SvImJ_G0028212.1 mouse_genomes_project 4 41675275 41676275 - Tln1 protein_coding processed_transcript MGP_129S1SvImJ_T0065382.1 MGP_129S1SvImJ_G0028212.1 mouse_genomes_project 4 41676337 41683877 - Tln1 protein_coding processed_transcript MGP_129S1SvImJ_T0065383.1 MGP_129S1SvImJ_G0028212.1 mouse_genomes_project 4 41676929 41680283 - MGP_129S1SvImJ_P0065383 Tln1 protein_coding protein_coding MGP_129S1SvImJ_T0065384.1 MGP_129S1SvImJ_G0028212.1 mouse_genomes_project 4 41677387 41677770 - Tln1 protein_coding processed_transcript MGP_129S1SvImJ_T0065385.1 MGP_129S1SvImJ_G0028212.1 mouse_genomes_project 4 41681165 41684410 - Tln1 protein_coding processed_transcript MGP_129S1SvImJ_T0004490.1 MGP_129S1SvImJ_G0003916.1 mouse_genomes_project 4 88608461 88614191 - Gm13274 antisense antisense MGP_129S1SvImJ_T0004491.1 MGP_129S1SvImJ_G0003916.1 mouse_genomes_project 4 88608554 88614190 - Gm13274 antisense antisense MGP_129S1SvImJ_T0067130.1 MGP_129S1SvImJ_G0028619.1 mouse_genomes_project 4 116974978 116990139 + Pomgnt1 protein_coding processed_transcript MGP_129S1SvImJ_T0067132.1 MGP_129S1SvImJ_G0028619.1 mouse_genomes_project 4 116988525 117013320 + MGP_129S1SvImJ_P0067132 Pomgnt1 protein_coding protein_coding MGP_129S1SvImJ_T0067133.1 MGP_129S1SvImJ_G0028619.1 mouse_genomes_project 4 116988540 117013321 + Pomgnt1 protein_coding retained_intron MGP_129S1SvImJ_T0067135.1 MGP_129S1SvImJ_G0028619.1 mouse_genomes_project 4 116989043 117013316 + MGP_129S1SvImJ_P0067135 Pomgnt1 protein_coding protein_coding MGP_129S1SvImJ_T0067136.1 MGP_129S1SvImJ_G0028619.1 mouse_genomes_project 4 117003989 117013316 + MGP_129S1SvImJ_P0067136 Pomgnt1 protein_coding protein_coding MGP_129S1SvImJ_T0067137.1 MGP_129S1SvImJ_G0028619.1 mouse_genomes_project 4 117003996 117013316 + MGP_129S1SvImJ_P0067137 Pomgnt1 protein_coding protein_coding MGP_129S1SvImJ_T0067138.1 MGP_129S1SvImJ_G0028619.1 mouse_genomes_project 4 117004902 117012909 + MGP_129S1SvImJ_P0067138 Pomgnt1 protein_coding protein_coding MGP_129S1SvImJ_T0067139.1 MGP_129S1SvImJ_G0028619.1 mouse_genomes_project 4 117008066 117009264 + Pomgnt1 protein_coding processed_transcript MGP_129S1SvImJ_T0067140.1 MGP_129S1SvImJ_G0028619.1 mouse_genomes_project 4 117008790 117012466 + Pomgnt1 protein_coding retained_intron MGP_129S1SvImJ_T0067141.1 MGP_129S1SvImJ_G0028619.1 mouse_genomes_project 4 117009408 117010125 + Pomgnt1 protein_coding retained_intron MGP_129S1SvImJ_T0067142.1 MGP_129S1SvImJ_G0028619.1 mouse_genomes_project 4 117009420 117012530 + Pomgnt1 protein_coding processed_transcript MGP_129S1SvImJ_T0067143.1 MGP_129S1SvImJ_G0028619.1 mouse_genomes_project 4 117010863 117012497 + Pomgnt1 protein_coding retained_intron MGP_129S1SvImJ_T0068946.1 MGP_129S1SvImJ_G0029029.1 mouse_genomes_project 4 143715663 143751314 - MGP_129S1SvImJ_P0068946 Padi4 protein_coding protein_coding MGP_129S1SvImJ_T0068947.1 MGP_129S1SvImJ_G0029029.1 mouse_genomes_project 4 143728253 143734069 - Padi4 protein_coding processed_transcript MGP_129S1SvImJ_T0068948.1 MGP_129S1SvImJ_G0029029.1 mouse_genomes_project 4 143730441 143734062 - Padi4 protein_coding processed_transcript MGP_129S1SvImJ_T0064950.1 MGP_129S1SvImJ_G0028116.1 mouse_genomes_project 4 30471351 30514530 + MGP_129S1SvImJ_P0064950 Rragd protein_coding protein_coding MGP_129S1SvImJ_T0064951.1 MGP_129S1SvImJ_G0028116.1 mouse_genomes_project 4 30471657 30511148 + MGP_129S1SvImJ_P0064951 Rragd protein_coding protein_coding MGP_129S1SvImJ_T0064952.1 MGP_129S1SvImJ_G0028116.1 mouse_genomes_project 4 30496805 30511168 + Rragd protein_coding processed_transcript MGP_129S1SvImJ_T0101132.1 MGP_129S1SvImJ_G0039199.1 mouse_genomes_project 4 78717587 78717710 - Gm25836 snoRNA snoRNA MGP_129S1SvImJ_T0068867.1 MGP_129S1SvImJ_G0029011.1 mouse_genomes_project 4 141891482 141903884 - MGP_129S1SvImJ_P0068867 Nbl1 protein_coding protein_coding MGP_129S1SvImJ_T0068868.1 MGP_129S1SvImJ_G0029011.1 mouse_genomes_project 4 141892405 141902997 - Nbl1 protein_coding processed_transcript MGP_129S1SvImJ_T0068869.1 MGP_129S1SvImJ_G0029011.1 mouse_genomes_project 4 141902966 141903859 - Nbl1 protein_coding processed_transcript MGP_129S1SvImJ_T0004525.1 MGP_129S1SvImJ_G0003935.1 mouse_genomes_project 4 115566944 115659569 - 9130410C08Rik antisense antisense MGP_129S1SvImJ_T0069219.1 MGP_129S1SvImJ_G0029119.1 mouse_genomes_project 4 151835646 151842125 - MGP_129S1SvImJ_P0069219 Fbxo6 protein_coding protein_coding MGP_129S1SvImJ_T0069220.1 MGP_129S1SvImJ_G0029119.1 mouse_genomes_project 4 151835646 151841888 - MGP_129S1SvImJ_P0069220 Fbxo6 protein_coding protein_coding MGP_129S1SvImJ_T0069221.1 MGP_129S1SvImJ_G0029119.1 mouse_genomes_project 4 151835717 151841893 - MGP_129S1SvImJ_P0069221 Fbxo6 protein_coding protein_coding MGP_129S1SvImJ_T0069222.1 MGP_129S1SvImJ_G0029119.1 mouse_genomes_project 4 151835718 151842049 - MGP_129S1SvImJ_P0069222 Fbxo6 protein_coding protein_coding MGP_129S1SvImJ_T0069223.1 MGP_129S1SvImJ_G0029119.1 mouse_genomes_project 4 151835939 151842130 - MGP_129S1SvImJ_P0069223 Fbxo6 protein_coding protein_coding MGP_129S1SvImJ_T0069224.1 MGP_129S1SvImJ_G0029119.1 mouse_genomes_project 4 151836022 151839664 - MGP_129S1SvImJ_P0069224 Fbxo6 protein_coding protein_coding MGP_129S1SvImJ_T0069225.1 MGP_129S1SvImJ_G0029119.1 mouse_genomes_project 4 151836048 151841905 - MGP_129S1SvImJ_P0069225 Fbxo6 protein_coding protein_coding MGP_129S1SvImJ_T0069226.1 MGP_129S1SvImJ_G0029119.1 mouse_genomes_project 4 151839388 151841626 - MGP_129S1SvImJ_P0069226 Fbxo6 protein_coding protein_coding MGP_129S1SvImJ_T0068874.1 MGP_129S1SvImJ_G0029013.1 mouse_genomes_project 4 142014651 142105252 + MGP_129S1SvImJ_P0068874 Capzb protein_coding protein_coding MGP_129S1SvImJ_T0068875.1 MGP_129S1SvImJ_G0029013.1 mouse_genomes_project 4 142014653 142116915 + MGP_129S1SvImJ_P0068875 Capzb protein_coding protein_coding MGP_129S1SvImJ_T0068876.1 MGP_129S1SvImJ_G0029013.1 mouse_genomes_project 4 142014668 142060931 + Capzb protein_coding retained_intron MGP_129S1SvImJ_T0068877.1 MGP_129S1SvImJ_G0029013.1 mouse_genomes_project 4 142014673 142116980 + MGP_129S1SvImJ_P0068877 Capzb protein_coding protein_coding MGP_129S1SvImJ_T0068878.1 MGP_129S1SvImJ_G0029013.1 mouse_genomes_project 4 142014698 142116971 + Capzb protein_coding processed_transcript MGP_129S1SvImJ_T0068879.1 MGP_129S1SvImJ_G0029013.1 mouse_genomes_project 4 142015725 142116597 + MGP_129S1SvImJ_P0068879 Capzb protein_coding protein_coding MGP_129S1SvImJ_T0068880.1 MGP_129S1SvImJ_G0029013.1 mouse_genomes_project 4 142015840 142061191 + Capzb protein_coding retained_intron MGP_129S1SvImJ_T0068881.1 MGP_129S1SvImJ_G0029013.1 mouse_genomes_project 4 142020996 142085569 + MGP_129S1SvImJ_P0068881 Capzb protein_coding protein_coding MGP_129S1SvImJ_T0068882.1 MGP_129S1SvImJ_G0029013.1 mouse_genomes_project 4 142048720 142112246 + MGP_129S1SvImJ_P0068882 Capzb protein_coding protein_coding MGP_129S1SvImJ_T0068883.1 MGP_129S1SvImJ_G0029013.1 mouse_genomes_project 4 142114102 142114972 + Capzb protein_coding processed_transcript MGP_129S1SvImJ_T0067047.1 MGP_129S1SvImJ_G0028596.1 mouse_genomes_project 4 115876772 115904162 - MGP_129S1SvImJ_P0067047 Cyp4x1 protein_coding protein_coding MGP_129S1SvImJ_T0098592.1 MGP_129S1SvImJ_G0036677.1 mouse_genomes_project 4 81998492 81998597 + n-R5s188 rRNA rRNA MGP_129S1SvImJ_T0069165.1 MGP_129S1SvImJ_G0029102.1 mouse_genomes_project 4 148600197 148632151 - MGP_129S1SvImJ_P0069165 Tnfrsf1b protein_coding protein_coding MGP_129S1SvImJ_T0069166.1 MGP_129S1SvImJ_G0029102.1 mouse_genomes_project 4 148612106 148632151 - MGP_129S1SvImJ_P0069166 Tnfrsf1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066503.1 MGP_129S1SvImJ_G0028491.1 mouse_genomes_project 4 101432166 101558535 - MGP_129S1SvImJ_P0066503 Jak1 protein_coding protein_coding MGP_129S1SvImJ_T0066504.1 MGP_129S1SvImJ_G0028491.1 mouse_genomes_project 4 101434048 101434919 - Jak1 protein_coding processed_transcript MGP_129S1SvImJ_T0066505.1 MGP_129S1SvImJ_G0028491.1 mouse_genomes_project 4 101459348 101465177 - Jak1 protein_coding processed_transcript MGP_129S1SvImJ_T0066506.1 MGP_129S1SvImJ_G0028491.1 mouse_genomes_project 4 101460776 101465202 - Jak1 protein_coding processed_transcript MGP_129S1SvImJ_T0066507.1 MGP_129S1SvImJ_G0028491.1 mouse_genomes_project 4 101461629 101558534 - Jak1 protein_coding processed_transcript MGP_129S1SvImJ_T0066508.1 MGP_129S1SvImJ_G0028491.1 mouse_genomes_project 4 101461669 101558476 - Jak1 protein_coding processed_transcript MGP_129S1SvImJ_T0066509.1 MGP_129S1SvImJ_G0028491.1 mouse_genomes_project 4 101471377 101558526 - MGP_129S1SvImJ_P0066509 Jak1 protein_coding protein_coding MGP_129S1SvImJ_T0066510.1 MGP_129S1SvImJ_G0028491.1 mouse_genomes_project 4 101477589 101558479 - Jak1 protein_coding processed_transcript MGP_129S1SvImJ_T0065277.1 MGP_129S1SvImJ_G0028200.1 mouse_genomes_project 4 41114638 41127863 - MGP_129S1SvImJ_P0065277 Fam214b protein_coding protein_coding MGP_129S1SvImJ_T0065278.1 MGP_129S1SvImJ_G0028200.1 mouse_genomes_project 4 41114638 41128258 - MGP_129S1SvImJ_P0065278 Fam214b protein_coding protein_coding MGP_129S1SvImJ_T0065279.1 MGP_129S1SvImJ_G0028200.1 mouse_genomes_project 4 41114638 41122515 - MGP_129S1SvImJ_P0065279 Fam214b protein_coding protein_coding MGP_129S1SvImJ_T0065280.1 MGP_129S1SvImJ_G0028200.1 mouse_genomes_project 4 41114638 41127835 - MGP_129S1SvImJ_P0065280 Fam214b protein_coding protein_coding MGP_129S1SvImJ_T0065281.1 MGP_129S1SvImJ_G0028200.1 mouse_genomes_project 4 41114638 41122518 - MGP_129S1SvImJ_P0065281 Fam214b protein_coding protein_coding MGP_129S1SvImJ_T0065282.1 MGP_129S1SvImJ_G0028200.1 mouse_genomes_project 4 41114638 41128258 - MGP_129S1SvImJ_P0065282 Fam214b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065283.1 MGP_129S1SvImJ_G0028200.1 mouse_genomes_project 4 41118551 41122522 - MGP_129S1SvImJ_P0065283 Fam214b protein_coding protein_coding MGP_129S1SvImJ_T0065284.1 MGP_129S1SvImJ_G0028200.1 mouse_genomes_project 4 41118832 41119534 - MGP_129S1SvImJ_P0065284 Fam214b protein_coding protein_coding MGP_129S1SvImJ_T0065285.1 MGP_129S1SvImJ_G0028200.1 mouse_genomes_project 4 41118935 41121558 - MGP_129S1SvImJ_P0065285 Fam214b protein_coding protein_coding MGP_129S1SvImJ_T0065286.1 MGP_129S1SvImJ_G0028200.1 mouse_genomes_project 4 41119209 41127797 - Fam214b protein_coding processed_transcript MGP_129S1SvImJ_T0007970.1 MGP_129S1SvImJ_G0006513.1 mouse_genomes_project 4 130677989 130715296 + Gm12968 lincRNA lincRNA MGP_129S1SvImJ_T0014468.1 MGP_129S1SvImJ_G0012557.1 mouse_genomes_project 4 20622277 20623192 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064962.1 MGP_129S1SvImJ_G0028121.1 mouse_genomes_project 4 30718160 30743192 + MGP_129S1SvImJ_P0064962 Srsf12 protein_coding protein_coding MGP_129S1SvImJ_T0064963.1 MGP_129S1SvImJ_G0028121.1 mouse_genomes_project 4 30718475 30743202 + MGP_129S1SvImJ_P0064963 Srsf12 protein_coding protein_coding MGP_129S1SvImJ_T0064840.1 MGP_129S1SvImJ_G0028093.1 mouse_genomes_project 4 18871583 18899276 + MGP_129S1SvImJ_P0064840 Pnisr protein_coding protein_coding MGP_129S1SvImJ_T0064841.1 MGP_129S1SvImJ_G0028093.1 mouse_genomes_project 4 18872048 18896556 + MGP_129S1SvImJ_P0064841 Pnisr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064842.1 MGP_129S1SvImJ_G0028093.1 mouse_genomes_project 4 18872055 18899268 + MGP_129S1SvImJ_P0064842 Pnisr protein_coding protein_coding MGP_129S1SvImJ_T0064843.1 MGP_129S1SvImJ_G0028093.1 mouse_genomes_project 4 18872058 18884469 + Pnisr protein_coding processed_transcript MGP_129S1SvImJ_T0064844.1 MGP_129S1SvImJ_G0028093.1 mouse_genomes_project 4 18872058 18894143 + MGP_129S1SvImJ_P0064844 Pnisr protein_coding protein_coding MGP_129S1SvImJ_T0064845.1 MGP_129S1SvImJ_G0028093.1 mouse_genomes_project 4 18872064 18881991 + Pnisr protein_coding processed_transcript MGP_129S1SvImJ_T0064846.1 MGP_129S1SvImJ_G0028093.1 mouse_genomes_project 4 18872073 18878925 + Pnisr protein_coding processed_transcript MGP_129S1SvImJ_T0064847.1 MGP_129S1SvImJ_G0028093.1 mouse_genomes_project 4 18872081 18886124 + Pnisr protein_coding processed_transcript MGP_129S1SvImJ_T0064848.1 MGP_129S1SvImJ_G0028093.1 mouse_genomes_project 4 18878068 18883203 + Pnisr protein_coding processed_transcript MGP_129S1SvImJ_T0064849.1 MGP_129S1SvImJ_G0028093.1 mouse_genomes_project 4 18882726 18886044 + Pnisr protein_coding processed_transcript MGP_129S1SvImJ_T0064850.1 MGP_129S1SvImJ_G0028093.1 mouse_genomes_project 4 18882999 18884887 + Pnisr protein_coding processed_transcript MGP_129S1SvImJ_T0064851.1 MGP_129S1SvImJ_G0028093.1 mouse_genomes_project 4 18893834 18896665 + Pnisr protein_coding processed_transcript MGP_129S1SvImJ_T0064852.1 MGP_129S1SvImJ_G0028093.1 mouse_genomes_project 4 18897004 18898057 + Pnisr protein_coding processed_transcript MGP_129S1SvImJ_T0067867.1 MGP_129S1SvImJ_G0028792.1 mouse_genomes_project 4 128808200 128858610 + MGP_129S1SvImJ_P0067867 Zmym6 protein_coding protein_coding MGP_129S1SvImJ_T0067868.1 MGP_129S1SvImJ_G0028792.1 mouse_genomes_project 4 128808214 128858612 + MGP_129S1SvImJ_P0067868 Zmym6 protein_coding protein_coding MGP_129S1SvImJ_T0067869.1 MGP_129S1SvImJ_G0028792.1 mouse_genomes_project 4 128808259 128841266 + Zmym6 protein_coding processed_transcript MGP_129S1SvImJ_T0067870.1 MGP_129S1SvImJ_G0028792.1 mouse_genomes_project 4 128809108 128820558 + Zmym6 protein_coding processed_transcript MGP_129S1SvImJ_T0067871.1 MGP_129S1SvImJ_G0028792.1 mouse_genomes_project 4 128818791 128820701 + Zmym6 protein_coding processed_transcript MGP_129S1SvImJ_T0067872.1 MGP_129S1SvImJ_G0028792.1 mouse_genomes_project 4 128837554 128841144 + Zmym6 protein_coding processed_transcript MGP_129S1SvImJ_T0069941.1 MGP_129S1SvImJ_G0029250.1 mouse_genomes_project 4 160588957 160594453 + MGP_129S1SvImJ_P0069941 Perm1 protein_coding protein_coding MGP_129S1SvImJ_T0014564.1 MGP_129S1SvImJ_G0012653.1 mouse_genomes_project 4 50818886 50819506 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067314.1 MGP_129S1SvImJ_G0028654.1 mouse_genomes_project 4 118750763 118759447 - MGP_129S1SvImJ_P0067314 Klf17 protein_coding protein_coding MGP_129S1SvImJ_T0066277.1 MGP_129S1SvImJ_G0028423.1 mouse_genomes_project 4 88445082 88445652 - MGP_129S1SvImJ_P0066277 Ifna14 protein_coding protein_coding MGP_129S1SvImJ_T0014521.1 MGP_129S1SvImJ_G0012610.1 mouse_genomes_project 4 34955797 34956265 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099829.1 MGP_129S1SvImJ_G0037896.1 mouse_genomes_project 4 43792430 43792537 + Gm22055 snRNA snRNA MGP_129S1SvImJ_T0014839.1 MGP_129S1SvImJ_G0012928.1 mouse_genomes_project 4 147893844 147894476 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098366.1 MGP_129S1SvImJ_G0036451.1 mouse_genomes_project 4 144618213 144619917 + pseudogene pseudogene MGP_129S1SvImJ_T0066599.1 MGP_129S1SvImJ_G0028507.1 mouse_genomes_project 4 103647428 103708834 - MGP_129S1SvImJ_P0066599 4921539E11Rik protein_coding protein_coding MGP_129S1SvImJ_T0066600.1 MGP_129S1SvImJ_G0028507.1 mouse_genomes_project 4 103647428 103708834 - MGP_129S1SvImJ_P0066600 4921539E11Rik protein_coding protein_coding MGP_129S1SvImJ_T0066601.1 MGP_129S1SvImJ_G0028507.1 mouse_genomes_project 4 103653115 103708834 - MGP_129S1SvImJ_P0066601 4921539E11Rik protein_coding protein_coding MGP_129S1SvImJ_T0014840.1 MGP_129S1SvImJ_G0012929.1 mouse_genomes_project 4 147914624 147927418 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065604.1 MGP_129S1SvImJ_G0028257.1 mouse_genomes_project 4 44699781 44723332 - MGP_129S1SvImJ_P0065604 Hemgn protein_coding protein_coding MGP_129S1SvImJ_T0065605.1 MGP_129S1SvImJ_G0028257.1 mouse_genomes_project 4 44699781 44710038 - MGP_129S1SvImJ_P0065605 Hemgn protein_coding protein_coding MGP_129S1SvImJ_T0014467.1 MGP_129S1SvImJ_G0012556.1 mouse_genomes_project 4 20588283 20589484 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066111.1 MGP_129S1SvImJ_G0028397.1 mouse_genomes_project 4 80842101 80999224 - MGP_129S1SvImJ_P0066111 Mpdz protein_coding protein_coding MGP_129S1SvImJ_T0066112.1 MGP_129S1SvImJ_G0028397.1 mouse_genomes_project 4 80842106 80898642 - MGP_129S1SvImJ_P0066112 Mpdz protein_coding protein_coding MGP_129S1SvImJ_T0066113.1 MGP_129S1SvImJ_G0028397.1 mouse_genomes_project 4 80842106 80999226 - MGP_129S1SvImJ_P0066113 Mpdz protein_coding protein_coding MGP_129S1SvImJ_T0066114.1 MGP_129S1SvImJ_G0028397.1 mouse_genomes_project 4 80842832 80849089 - Mpdz protein_coding retained_intron MGP_129S1SvImJ_T0066115.1 MGP_129S1SvImJ_G0028397.1 mouse_genomes_project 4 80842935 80859137 - MGP_129S1SvImJ_P0066115 Mpdz protein_coding protein_coding MGP_129S1SvImJ_T0066116.1 MGP_129S1SvImJ_G0028397.1 mouse_genomes_project 4 80846543 80848251 - Mpdz protein_coding retained_intron MGP_129S1SvImJ_T0066117.1 MGP_129S1SvImJ_G0028397.1 mouse_genomes_project 4 80846927 80856165 - MGP_129S1SvImJ_P0066117 Mpdz protein_coding protein_coding MGP_129S1SvImJ_T0066118.1 MGP_129S1SvImJ_G0028397.1 mouse_genomes_project 4 80848128 80851623 - Mpdz protein_coding retained_intron MGP_129S1SvImJ_T0066119.1 MGP_129S1SvImJ_G0028397.1 mouse_genomes_project 4 80853444 80856382 - Mpdz protein_coding retained_intron MGP_129S1SvImJ_T0066120.1 MGP_129S1SvImJ_G0028397.1 mouse_genomes_project 4 80856111 80856727 - Mpdz protein_coding retained_intron MGP_129S1SvImJ_T0066121.1 MGP_129S1SvImJ_G0028397.1 mouse_genomes_project 4 80870243 80883908 - MGP_129S1SvImJ_P0066121 Mpdz protein_coding protein_coding MGP_129S1SvImJ_T0066122.1 MGP_129S1SvImJ_G0028397.1 mouse_genomes_project 4 80883730 80895811 - MGP_129S1SvImJ_P0066122 Mpdz protein_coding protein_coding MGP_129S1SvImJ_T0066123.1 MGP_129S1SvImJ_G0028397.1 mouse_genomes_project 4 80883752 80898600 - MGP_129S1SvImJ_P0066123 Mpdz protein_coding protein_coding MGP_129S1SvImJ_T0066124.1 MGP_129S1SvImJ_G0028397.1 mouse_genomes_project 4 80908230 80922292 - MGP_129S1SvImJ_P0066124 Mpdz protein_coding protein_coding MGP_129S1SvImJ_T0066125.1 MGP_129S1SvImJ_G0028397.1 mouse_genomes_project 4 80967009 80999234 - Mpdz protein_coding retained_intron MGP_129S1SvImJ_T0067375.1 MGP_129S1SvImJ_G0028664.1 mouse_genomes_project 4 119236169 119322906 - MGP_129S1SvImJ_P0067375 Ptprf protein_coding protein_coding MGP_129S1SvImJ_T0067376.1 MGP_129S1SvImJ_G0028664.1 mouse_genomes_project 4 119236944 119245636 - Ptprf protein_coding processed_transcript MGP_129S1SvImJ_T0067377.1 MGP_129S1SvImJ_G0028664.1 mouse_genomes_project 4 119236960 119264383 - MGP_129S1SvImJ_P0067377 Ptprf protein_coding protein_coding MGP_129S1SvImJ_T0067378.1 MGP_129S1SvImJ_G0028664.1 mouse_genomes_project 4 119236965 119263954 - MGP_129S1SvImJ_P0067378 Ptprf protein_coding protein_coding MGP_129S1SvImJ_T0067379.1 MGP_129S1SvImJ_G0028664.1 mouse_genomes_project 4 119237815 119238697 - Ptprf protein_coding processed_transcript MGP_129S1SvImJ_T0067380.1 MGP_129S1SvImJ_G0028664.1 mouse_genomes_project 4 119254089 119259032 - Ptprf protein_coding processed_transcript MGP_129S1SvImJ_T0014626.1 MGP_129S1SvImJ_G0012715.1 mouse_genomes_project 4 74409847 74411228 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067596.1 MGP_129S1SvImJ_G0028725.1 mouse_genomes_project 4 122916636 122924357 - MGP_129S1SvImJ_P0067596 Gm12887 protein_coding protein_coding MGP_129S1SvImJ_T0067430.1 MGP_129S1SvImJ_G0028682.1 mouse_genomes_project 4 119974078 119981042 + MGP_129S1SvImJ_P0067430 Olfr1331 protein_coding protein_coding MGP_129S1SvImJ_T0067431.1 MGP_129S1SvImJ_G0028682.1 mouse_genomes_project 4 119979920 119980743 + MGP_129S1SvImJ_P0067431 Olfr1331 protein_coding protein_coding MGP_129S1SvImJ_T0010645.1 MGP_129S1SvImJ_G0008761.1 mouse_genomes_project 4 134353198 134353278 - Gm22033 miRNA miRNA MGP_129S1SvImJ_T0066382.1 MGP_129S1SvImJ_G0028459.1 mouse_genomes_project 4 96134868 96163152 - MGP_129S1SvImJ_P0066382 Cyp2j13 protein_coding protein_coding MGP_129S1SvImJ_T0066383.1 MGP_129S1SvImJ_G0028459.1 mouse_genomes_project 4 96149838 96179437 - MGP_129S1SvImJ_P0066383 Cyp2j13 protein_coding protein_coding MGP_129S1SvImJ_T0066384.1 MGP_129S1SvImJ_G0028459.1 mouse_genomes_project 4 96152409 96179443 - MGP_129S1SvImJ_P0066384 Cyp2j13 protein_coding protein_coding MGP_129S1SvImJ_T0066385.1 MGP_129S1SvImJ_G0028459.1 mouse_genomes_project 4 96152409 96179421 - MGP_129S1SvImJ_P0066385 Cyp2j13 protein_coding protein_coding MGP_129S1SvImJ_T0064685.1 MGP_129S1SvImJ_G0028048.1 mouse_genomes_project 4 7802927 7821974 + MGP_129S1SvImJ_P0064685 Trp53inp1 protein_coding protein_coding MGP_129S1SvImJ_T0064686.1 MGP_129S1SvImJ_G0028048.1 mouse_genomes_project 4 7802937 7821974 + Trp53inp1 protein_coding processed_transcript MGP_129S1SvImJ_T0064687.1 MGP_129S1SvImJ_G0028048.1 mouse_genomes_project 4 7802940 7813995 + Trp53inp1 protein_coding processed_transcript MGP_129S1SvImJ_T0064688.1 MGP_129S1SvImJ_G0028048.1 mouse_genomes_project 4 7812053 7815609 + Trp53inp1 protein_coding processed_transcript MGP_129S1SvImJ_T0014458.1 MGP_129S1SvImJ_G0012547.1 mouse_genomes_project 4 18651797 18652596 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069132.1 MGP_129S1SvImJ_G0029086.1 mouse_genomes_project 4 147712651 147722328 + MGP_129S1SvImJ_P0069132 protein_coding protein_coding MGP_129S1SvImJ_T0099830.1 MGP_129S1SvImJ_G0037897.1 mouse_genomes_project 4 47739230 47739336 + Gm22685 snRNA snRNA MGP_129S1SvImJ_T0102545.1 MGP_129S1SvImJ_G0040378.1 mouse_genomes_project 4 124058148 124073936 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0066948.1 MGP_129S1SvImJ_G0028576.1 mouse_genomes_project 4 110997101 111088627 - MGP_129S1SvImJ_P0066948 Elavl4 protein_coding protein_coding MGP_129S1SvImJ_T0066949.1 MGP_129S1SvImJ_G0028576.1 mouse_genomes_project 4 110997116 111088627 - MGP_129S1SvImJ_P0066949 Elavl4 protein_coding protein_coding MGP_129S1SvImJ_T0066950.1 MGP_129S1SvImJ_G0028576.1 mouse_genomes_project 4 110997116 111149165 - MGP_129S1SvImJ_P0066950 Elavl4 protein_coding protein_coding MGP_129S1SvImJ_T0066951.1 MGP_129S1SvImJ_G0028576.1 mouse_genomes_project 4 110997116 111093799 - MGP_129S1SvImJ_P0066951 Elavl4 protein_coding protein_coding MGP_129S1SvImJ_T0066952.1 MGP_129S1SvImJ_G0028576.1 mouse_genomes_project 4 110997116 111091340 - MGP_129S1SvImJ_P0066952 Elavl4 protein_coding protein_coding MGP_129S1SvImJ_T0066953.1 MGP_129S1SvImJ_G0028576.1 mouse_genomes_project 4 110997116 111087989 - MGP_129S1SvImJ_P0066953 Elavl4 protein_coding protein_coding MGP_129S1SvImJ_T0066954.1 MGP_129S1SvImJ_G0028576.1 mouse_genomes_project 4 110997116 111087989 - MGP_129S1SvImJ_P0066954 Elavl4 protein_coding protein_coding MGP_129S1SvImJ_T0066955.1 MGP_129S1SvImJ_G0028576.1 mouse_genomes_project 4 111000754 111018908 - Elavl4 protein_coding processed_transcript MGP_129S1SvImJ_T0066956.1 MGP_129S1SvImJ_G0028576.1 mouse_genomes_project 4 111007610 111087716 - MGP_129S1SvImJ_P0066956 Elavl4 protein_coding protein_coding MGP_129S1SvImJ_T0066957.1 MGP_129S1SvImJ_G0028576.1 mouse_genomes_project 4 111021339 111075290 - Elavl4 protein_coding processed_transcript MGP_129S1SvImJ_T0066958.1 MGP_129S1SvImJ_G0028576.1 mouse_genomes_project 4 111022368 111088627 - MGP_129S1SvImJ_P0066958 Elavl4 protein_coding protein_coding MGP_129S1SvImJ_T0066959.1 MGP_129S1SvImJ_G0028576.1 mouse_genomes_project 4 111048890 111091962 - MGP_129S1SvImJ_P0066959 Elavl4 protein_coding protein_coding MGP_129S1SvImJ_T0007983.1 MGP_129S1SvImJ_G0006521.1 mouse_genomes_project 4 132826791 132828578 + Gm12972 lincRNA lincRNA MGP_129S1SvImJ_T0069119.1 MGP_129S1SvImJ_G0029075.1 mouse_genomes_project 4 146913865 147457050 - MGP_129S1SvImJ_P0069119 Oog3 protein_coding protein_coding MGP_129S1SvImJ_T0101084.1 MGP_129S1SvImJ_G0039151.1 mouse_genomes_project 4 274201 274338 - Gm22781 snoRNA snoRNA MGP_129S1SvImJ_T0014422.1 MGP_129S1SvImJ_G0012511.1 mouse_genomes_project 4 8057256 8059880 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068323.1 MGP_129S1SvImJ_G0028885.1 mouse_genomes_project 4 135225905 135278615 + Ahdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0068324.1 MGP_129S1SvImJ_G0028885.1 mouse_genomes_project 4 135226151 135299014 + MGP_129S1SvImJ_P0068324 Ahdc1 protein_coding protein_coding MGP_129S1SvImJ_T0068325.1 MGP_129S1SvImJ_G0028885.1 mouse_genomes_project 4 135226151 135299261 + MGP_129S1SvImJ_P0068325 Ahdc1 protein_coding protein_coding MGP_129S1SvImJ_T0068326.1 MGP_129S1SvImJ_G0028885.1 mouse_genomes_project 4 135226188 135278906 + Ahdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0068327.1 MGP_129S1SvImJ_G0028885.1 mouse_genomes_project 4 135226210 135273086 + Ahdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0068328.1 MGP_129S1SvImJ_G0028885.1 mouse_genomes_project 4 135226483 135298803 + Ahdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0068329.1 MGP_129S1SvImJ_G0028885.1 mouse_genomes_project 4 135226695 135278617 + Ahdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0068330.1 MGP_129S1SvImJ_G0028885.1 mouse_genomes_project 4 135226737 135279571 + Ahdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0068331.1 MGP_129S1SvImJ_G0028885.1 mouse_genomes_project 4 135226849 135298804 + MGP_129S1SvImJ_P0068331 Ahdc1 protein_coding protein_coding MGP_129S1SvImJ_T0068332.1 MGP_129S1SvImJ_G0028885.1 mouse_genomes_project 4 135257512 135298415 + MGP_129S1SvImJ_P0068332 Ahdc1 protein_coding protein_coding MGP_129S1SvImJ_T0068333.1 MGP_129S1SvImJ_G0028885.1 mouse_genomes_project 4 135284046 135291437 + Ahdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0069945.1 MGP_129S1SvImJ_G0029253.1 mouse_genomes_project 4 160609055 160620113 + MGP_129S1SvImJ_P0069945 Noc2l protein_coding protein_coding MGP_129S1SvImJ_T0069946.1 MGP_129S1SvImJ_G0029253.1 mouse_genomes_project 4 160609096 160620100 + MGP_129S1SvImJ_P0069946 Noc2l protein_coding protein_coding MGP_129S1SvImJ_T0069147.1 MGP_129S1SvImJ_G0029099.1 mouse_genomes_project 4 148146893 148158254 - MGP_129S1SvImJ_P0069147 Gm438 protein_coding protein_coding MGP_129S1SvImJ_T0065913.1 MGP_129S1SvImJ_G0028341.1 mouse_genomes_project 4 58835461 58845402 - MGP_129S1SvImJ_P0065913 Slc46a2 protein_coding protein_coding MGP_129S1SvImJ_T0068604.1 MGP_129S1SvImJ_G0028945.1 mouse_genomes_project 4 137934400 137962496 + Stpg1 protein_coding processed_transcript MGP_129S1SvImJ_T0068605.1 MGP_129S1SvImJ_G0028945.1 mouse_genomes_project 4 137935584 137977623 + Stpg1 protein_coding processed_transcript MGP_129S1SvImJ_T0068606.1 MGP_129S1SvImJ_G0028945.1 mouse_genomes_project 4 137935594 137981432 + MGP_129S1SvImJ_P0068606 Stpg1 protein_coding protein_coding MGP_129S1SvImJ_T0067885.1 MGP_129S1SvImJ_G0028799.1 mouse_genomes_project 4 129106822 129110195 - MGP_129S1SvImJ_P0067885 Gjb5 protein_coding protein_coding MGP_129S1SvImJ_T0069374.1 MGP_129S1SvImJ_G0029145.1 mouse_genomes_project 4 153616454 153639143 - MGP_129S1SvImJ_P0069374 Tmem201 protein_coding protein_coding MGP_129S1SvImJ_T0069375.1 MGP_129S1SvImJ_G0029145.1 mouse_genomes_project 4 153616462 153639143 - MGP_129S1SvImJ_P0069375 Tmem201 protein_coding protein_coding MGP_129S1SvImJ_T0069376.1 MGP_129S1SvImJ_G0029145.1 mouse_genomes_project 4 153625924 153631765 - Tmem201 protein_coding retained_intron MGP_129S1SvImJ_T0069377.1 MGP_129S1SvImJ_G0029145.1 mouse_genomes_project 4 153625924 153639143 - MGP_129S1SvImJ_P0069377 Tmem201 protein_coding protein_coding MGP_129S1SvImJ_T0069378.1 MGP_129S1SvImJ_G0029145.1 mouse_genomes_project 4 153629850 153639097 - Tmem201 protein_coding retained_intron MGP_129S1SvImJ_T0069379.1 MGP_129S1SvImJ_G0029145.1 mouse_genomes_project 4 153632241 153638869 - Tmem201 protein_coding processed_transcript MGP_129S1SvImJ_T0014749.1 MGP_129S1SvImJ_G0012838.1 mouse_genomes_project 4 117887036 117887839 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001431.1 MGP_129S1SvImJ_G0001354.1 mouse_genomes_project 4 42888500 42890811 + TEC TEC MGP_129S1SvImJ_T0069780.1 MGP_129S1SvImJ_G0029216.1 mouse_genomes_project 4 159904802 159933880 + MGP_129S1SvImJ_P0069780 Nadk protein_coding protein_coding MGP_129S1SvImJ_T0069781.1 MGP_129S1SvImJ_G0029216.1 mouse_genomes_project 4 159906141 159933884 + MGP_129S1SvImJ_P0069781 Nadk protein_coding protein_coding MGP_129S1SvImJ_T0069782.1 MGP_129S1SvImJ_G0029216.1 mouse_genomes_project 4 159906267 159919976 + Nadk protein_coding processed_transcript MGP_129S1SvImJ_T0069783.1 MGP_129S1SvImJ_G0029216.1 mouse_genomes_project 4 159906283 159919970 + MGP_129S1SvImJ_P0069783 Nadk protein_coding protein_coding MGP_129S1SvImJ_T0069784.1 MGP_129S1SvImJ_G0029216.1 mouse_genomes_project 4 159906349 159922266 + MGP_129S1SvImJ_P0069784 Nadk protein_coding protein_coding MGP_129S1SvImJ_T0069785.1 MGP_129S1SvImJ_G0029216.1 mouse_genomes_project 4 159906513 159922220 + MGP_129S1SvImJ_P0069785 Nadk protein_coding protein_coding MGP_129S1SvImJ_T0069786.1 MGP_129S1SvImJ_G0029216.1 mouse_genomes_project 4 159925377 159933884 + MGP_129S1SvImJ_P0069786 Nadk protein_coding protein_coding MGP_129S1SvImJ_T0069787.1 MGP_129S1SvImJ_G0029216.1 mouse_genomes_project 4 159929659 159932503 + Nadk protein_coding processed_transcript MGP_129S1SvImJ_T0065042.1 MGP_129S1SvImJ_G0028140.1 mouse_genomes_project 4 37979829 38041153 + MGP_129S1SvImJ_P0065042 Aco1 protein_coding protein_coding MGP_129S1SvImJ_T0065043.1 MGP_129S1SvImJ_G0028140.1 mouse_genomes_project 4 38004844 38010492 + Aco1 protein_coding processed_transcript MGP_129S1SvImJ_T0065044.1 MGP_129S1SvImJ_G0028140.1 mouse_genomes_project 4 38008008 38016999 + Aco1 protein_coding processed_transcript MGP_129S1SvImJ_T0065045.1 MGP_129S1SvImJ_G0028140.1 mouse_genomes_project 4 38031622 38039219 + Aco1 protein_coding processed_transcript MGP_129S1SvImJ_T0001425.1 MGP_129S1SvImJ_G0001348.1 mouse_genomes_project 4 5015342 5031097 - TEC TEC MGP_129S1SvImJ_T0068373.1 MGP_129S1SvImJ_G0028896.1 mouse_genomes_project 4 135774028 135790421 + MGP_129S1SvImJ_P0068373 Kdf1 protein_coding protein_coding MGP_129S1SvImJ_T0068374.1 MGP_129S1SvImJ_G0028896.1 mouse_genomes_project 4 135774057 135793049 + MGP_129S1SvImJ_P0068374 Kdf1 protein_coding protein_coding MGP_129S1SvImJ_T0068375.1 MGP_129S1SvImJ_G0028896.1 mouse_genomes_project 4 135774088 135790144 + MGP_129S1SvImJ_P0068375 Kdf1 protein_coding protein_coding MGP_129S1SvImJ_T0068376.1 MGP_129S1SvImJ_G0028896.1 mouse_genomes_project 4 135774120 135793044 + MGP_129S1SvImJ_P0068376 Kdf1 protein_coding protein_coding MGP_129S1SvImJ_T0068377.1 MGP_129S1SvImJ_G0028896.1 mouse_genomes_project 4 135774148 135793046 + MGP_129S1SvImJ_P0068377 Kdf1 protein_coding protein_coding MGP_129S1SvImJ_T0004446.1 MGP_129S1SvImJ_G0003877.1 mouse_genomes_project 4 11845530 11858516 + Gm11844 antisense antisense MGP_129S1SvImJ_T0066218.1 MGP_129S1SvImJ_G0028410.1 mouse_genomes_project 4 86208903 86300081 - Saxo1 protein_coding processed_transcript MGP_129S1SvImJ_T0066219.1 MGP_129S1SvImJ_G0028410.1 mouse_genomes_project 4 86208903 86320935 - MGP_129S1SvImJ_P0066219 Saxo1 protein_coding protein_coding MGP_129S1SvImJ_T0066220.1 MGP_129S1SvImJ_G0028410.1 mouse_genomes_project 4 86237810 86320627 - Saxo1 protein_coding processed_transcript MGP_129S1SvImJ_T0066221.1 MGP_129S1SvImJ_G0028410.1 mouse_genomes_project 4 86240398 86320960 - Saxo1 protein_coding processed_transcript MGP_129S1SvImJ_T0069355.1 MGP_129S1SvImJ_G0029142.1 mouse_genomes_project 4 153371862 153422479 + MGP_129S1SvImJ_P0069355 Ctnnbip1 protein_coding protein_coding MGP_129S1SvImJ_T0069356.1 MGP_129S1SvImJ_G0029142.1 mouse_genomes_project 4 153399027 153420550 + MGP_129S1SvImJ_P0069356 Ctnnbip1 protein_coding protein_coding MGP_129S1SvImJ_T0004629.1 MGP_129S1SvImJ_G0004018.1 mouse_genomes_project 4 159145311 159150692 - Gm13112 antisense antisense MGP_129S1SvImJ_T0004630.1 MGP_129S1SvImJ_G0004018.1 mouse_genomes_project 4 159145888 159153206 - Gm13112 antisense antisense MGP_129S1SvImJ_T0067438.1 MGP_129S1SvImJ_G0028687.1 mouse_genomes_project 4 120287582 120317096 + MGP_129S1SvImJ_P0067438 Slc2a1 protein_coding protein_coding MGP_129S1SvImJ_T0067439.1 MGP_129S1SvImJ_G0028687.1 mouse_genomes_project 4 120287675 120311714 + MGP_129S1SvImJ_P0067439 Slc2a1 protein_coding protein_coding MGP_129S1SvImJ_T0067440.1 MGP_129S1SvImJ_G0028687.1 mouse_genomes_project 4 120287730 120311686 + MGP_129S1SvImJ_P0067440 Slc2a1 protein_coding protein_coding MGP_129S1SvImJ_T0067441.1 MGP_129S1SvImJ_G0028687.1 mouse_genomes_project 4 120287785 120316441 + MGP_129S1SvImJ_P0067441 Slc2a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069685.1 MGP_129S1SvImJ_G0029201.1 mouse_genomes_project 4 159177276 159180811 - Fam213b protein_coding processed_transcript MGP_129S1SvImJ_T0069686.1 MGP_129S1SvImJ_G0029201.1 mouse_genomes_project 4 159178171 159180883 - MGP_129S1SvImJ_P0069686 Fam213b protein_coding protein_coding MGP_129S1SvImJ_T0069687.1 MGP_129S1SvImJ_G0029201.1 mouse_genomes_project 4 159179107 159180908 - MGP_129S1SvImJ_P0069687 Fam213b protein_coding protein_coding MGP_129S1SvImJ_T0010646.1 MGP_129S1SvImJ_G0008762.1 mouse_genomes_project 4 134561069 134561165 + Gm25707 miRNA miRNA MGP_129S1SvImJ_T0065221.1 MGP_129S1SvImJ_G0028192.1 mouse_genomes_project 4 40940067 40946267 - MGP_129S1SvImJ_P0065221 Fam205c protein_coding protein_coding MGP_129S1SvImJ_T0065222.1 MGP_129S1SvImJ_G0028192.1 mouse_genomes_project 4 40940266 40946259 - MGP_129S1SvImJ_P0065222 Fam205c protein_coding protein_coding MGP_129S1SvImJ_T0065223.1 MGP_129S1SvImJ_G0028192.1 mouse_genomes_project 4 40943563 40945785 - Fam205c protein_coding processed_transcript MGP_129S1SvImJ_T0065224.1 MGP_129S1SvImJ_G0028192.1 mouse_genomes_project 4 40943751 40946298 - Fam205c protein_coding processed_transcript MGP_129S1SvImJ_T0068821.1 MGP_129S1SvImJ_G0028994.1 mouse_genomes_project 4 141041373 141054485 - MGP_129S1SvImJ_P0068821 Pink1 protein_coding protein_coding MGP_129S1SvImJ_T0068822.1 MGP_129S1SvImJ_G0028994.1 mouse_genomes_project 4 141042329 141054506 - MGP_129S1SvImJ_P0068822 Pink1 protein_coding protein_coding MGP_129S1SvImJ_T0069309.1 MGP_129S1SvImJ_G0029135.1 mouse_genomes_project 4 152941975 152954348 - MGP_129S1SvImJ_P0069309 Apitd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069310.1 MGP_129S1SvImJ_G0029135.1 mouse_genomes_project 4 152943305 152954369 - MGP_129S1SvImJ_P0069310 Apitd1 protein_coding protein_coding MGP_129S1SvImJ_T0069311.1 MGP_129S1SvImJ_G0029135.1 mouse_genomes_project 4 152943312 152945222 - Apitd1 protein_coding retained_intron MGP_129S1SvImJ_T0069312.1 MGP_129S1SvImJ_G0029135.1 mouse_genomes_project 4 152943538 152954323 - MGP_129S1SvImJ_P0069312 Apitd1 protein_coding protein_coding MGP_129S1SvImJ_T0069313.1 MGP_129S1SvImJ_G0029135.1 mouse_genomes_project 4 152943541 152954365 - MGP_129S1SvImJ_P0069313 Apitd1 protein_coding protein_coding MGP_129S1SvImJ_T0069314.1 MGP_129S1SvImJ_G0029135.1 mouse_genomes_project 4 152946130 152954377 - MGP_129S1SvImJ_P0069314 Apitd1 protein_coding protein_coding MGP_129S1SvImJ_T0065860.1 MGP_129S1SvImJ_G0028326.1 mouse_genomes_project 4 57646267 57647209 - MGP_129S1SvImJ_P0065860 Olfr267 protein_coding protein_coding MGP_129S1SvImJ_T0067284.1 MGP_129S1SvImJ_G0028648.1 mouse_genomes_project 4 118176317 118222476 - MGP_129S1SvImJ_P0067284 Gm1661 protein_coding protein_coding MGP_129S1SvImJ_T0067285.1 MGP_129S1SvImJ_G0028648.1 mouse_genomes_project 4 118178175 118222476 - MGP_129S1SvImJ_P0067285 Gm1661 protein_coding protein_coding MGP_129S1SvImJ_T0067286.1 MGP_129S1SvImJ_G0028648.1 mouse_genomes_project 4 118210682 118222684 - Gm1661 protein_coding processed_transcript MGP_129S1SvImJ_T0064944.1 MGP_129S1SvImJ_G0028114.1 mouse_genomes_project 4 30275274 30340213 - MGP_129S1SvImJ_P0064944 Ankrd6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0064945.1 MGP_129S1SvImJ_G0028114.1 mouse_genomes_project 4 30275281 30434930 - MGP_129S1SvImJ_P0064945 Ankrd6 protein_coding protein_coding MGP_129S1SvImJ_T0064946.1 MGP_129S1SvImJ_G0028114.1 mouse_genomes_project 4 30276986 30336152 - MGP_129S1SvImJ_P0064946 Ankrd6 protein_coding protein_coding MGP_129S1SvImJ_T0064947.1 MGP_129S1SvImJ_G0028114.1 mouse_genomes_project 4 30296151 30401692 - Ankrd6 protein_coding processed_transcript MGP_129S1SvImJ_T0064948.1 MGP_129S1SvImJ_G0028114.1 mouse_genomes_project 4 30300021 30336393 - Ankrd6 protein_coding processed_transcript MGP_129S1SvImJ_T0067049.1 MGP_129S1SvImJ_G0028598.1 mouse_genomes_project 4 116209093 116239047 + MGP_129S1SvImJ_P0067049 Cyp4a12a protein_coding protein_coding MGP_129S1SvImJ_T0014642.1 MGP_129S1SvImJ_G0012731.1 mouse_genomes_project 4 79519708 79520851 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014715.1 MGP_129S1SvImJ_G0012804.1 mouse_genomes_project 4 106694586 106697375 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069609.1 MGP_129S1SvImJ_G0029187.1 mouse_genomes_project 4 158207242 158241227 + MGP_129S1SvImJ_P0069609 Cep104 protein_coding protein_coding MGP_129S1SvImJ_T0069610.1 MGP_129S1SvImJ_G0029187.1 mouse_genomes_project 4 158220456 158241227 + MGP_129S1SvImJ_P0069610 Cep104 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069611.1 MGP_129S1SvImJ_G0029187.1 mouse_genomes_project 4 158221195 158222066 + Cep104 protein_coding retained_intron MGP_129S1SvImJ_T0004589.1 MGP_129S1SvImJ_G0003988.1 mouse_genomes_project 4 144695617 144697192 + AI507597 antisense antisense MGP_129S1SvImJ_T0004590.1 MGP_129S1SvImJ_G0003988.1 mouse_genomes_project 4 144695945 144697192 + AI507597 antisense antisense MGP_129S1SvImJ_T0068562.1 MGP_129S1SvImJ_G0028939.1 mouse_genomes_project 4 137529950 137593757 + MGP_129S1SvImJ_P0068562 Runx3 protein_coding protein_coding MGP_129S1SvImJ_T0068563.1 MGP_129S1SvImJ_G0028939.1 mouse_genomes_project 4 137565008 137591959 + MGP_129S1SvImJ_P0068563 Runx3 protein_coding protein_coding MGP_129S1SvImJ_T0068564.1 MGP_129S1SvImJ_G0028939.1 mouse_genomes_project 4 137566852 137569500 + Runx3 protein_coding retained_intron MGP_129S1SvImJ_T0068565.1 MGP_129S1SvImJ_G0028939.1 mouse_genomes_project 4 137567074 137569262 + Runx3 protein_coding processed_transcript MGP_129S1SvImJ_T0068566.1 MGP_129S1SvImJ_G0028939.1 mouse_genomes_project 4 137567419 137569317 + Runx3 protein_coding processed_transcript MGP_129S1SvImJ_T0068567.1 MGP_129S1SvImJ_G0028939.1 mouse_genomes_project 4 137568326 137569233 + Runx3 protein_coding processed_transcript MGP_129S1SvImJ_T0101106.1 MGP_129S1SvImJ_G0039173.1 mouse_genomes_project 4 41222462 41222592 - Gm23709 snoRNA snoRNA MGP_129S1SvImJ_T0066623.1 MGP_129S1SvImJ_G0028515.1 mouse_genomes_project 4 105682995 105764812 + MGP_129S1SvImJ_P0066623 Plpp3 protein_coding protein_coding MGP_129S1SvImJ_T0014417.1 MGP_129S1SvImJ_G0012506.1 mouse_genomes_project 4 7218748 7219039 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065545.1 MGP_129S1SvImJ_G0028243.1 mouse_genomes_project 4 43545987 43550002 - MGP_129S1SvImJ_P0065545 Exosc3 protein_coding protein_coding MGP_129S1SvImJ_T0065546.1 MGP_129S1SvImJ_G0028243.1 mouse_genomes_project 4 43546168 43549709 - Exosc3 protein_coding processed_transcript MGP_129S1SvImJ_T0065547.1 MGP_129S1SvImJ_G0028243.1 mouse_genomes_project 4 43546328 43573215 - MGP_129S1SvImJ_P0065547 Exosc3 protein_coding protein_coding MGP_129S1SvImJ_T0065548.1 MGP_129S1SvImJ_G0028243.1 mouse_genomes_project 4 43546861 43549977 - Exosc3 protein_coding processed_transcript MGP_129S1SvImJ_T0067816.1 MGP_129S1SvImJ_G0028782.1 mouse_genomes_project 4 128172138 128217313 - MGP_129S1SvImJ_P0067816 Ago4 protein_coding protein_coding MGP_129S1SvImJ_T0067817.1 MGP_129S1SvImJ_G0028782.1 mouse_genomes_project 4 128197822 128199258 - Ago4 protein_coding processed_transcript MGP_129S1SvImJ_T0099831.1 MGP_129S1SvImJ_G0037898.1 mouse_genomes_project 4 47954679 47954783 + Gm26424 snRNA snRNA MGP_129S1SvImJ_T0069092.1 MGP_129S1SvImJ_G0029064.1 mouse_genomes_project 4 145242448 145358540 - MGP_129S1SvImJ_P0069092 protein_coding protein_coding MGP_129S1SvImJ_T0069093.1 MGP_129S1SvImJ_G0029064.1 mouse_genomes_project 4 145252120 145258051 - protein_coding processed_transcript MGP_129S1SvImJ_T0069094.1 MGP_129S1SvImJ_G0029064.1 mouse_genomes_project 4 145258172 145301270 - MGP_129S1SvImJ_P0069094 protein_coding protein_coding MGP_129S1SvImJ_T0069095.1 MGP_129S1SvImJ_G0029064.1 mouse_genomes_project 4 145281443 145390059 - MGP_129S1SvImJ_P0069095 protein_coding protein_coding MGP_129S1SvImJ_T0069096.1 MGP_129S1SvImJ_G0029064.1 mouse_genomes_project 4 145281450 145358442 - MGP_129S1SvImJ_P0069096 protein_coding protein_coding MGP_129S1SvImJ_T0069097.1 MGP_129S1SvImJ_G0029064.1 mouse_genomes_project 4 145281451 145288677 - protein_coding retained_intron MGP_129S1SvImJ_T0069098.1 MGP_129S1SvImJ_G0029064.1 mouse_genomes_project 4 145283748 145358540 - MGP_129S1SvImJ_P0069098 protein_coding protein_coding MGP_129S1SvImJ_T0069099.1 MGP_129S1SvImJ_G0029064.1 mouse_genomes_project 4 145288981 145296778 - protein_coding retained_intron MGP_129S1SvImJ_T0065429.1 MGP_129S1SvImJ_G0028221.1 mouse_genomes_project 4 41802258 41819134 + protein_coding processed_transcript MGP_129S1SvImJ_T0065430.1 MGP_129S1SvImJ_G0028221.1 mouse_genomes_project 4 41802322 41823086 + MGP_129S1SvImJ_P0065430 protein_coding protein_coding MGP_129S1SvImJ_T0065431.1 MGP_129S1SvImJ_G0028221.1 mouse_genomes_project 4 41802556 41818337 + MGP_129S1SvImJ_P0065431 protein_coding protein_coding MGP_129S1SvImJ_T0065432.1 MGP_129S1SvImJ_G0028221.1 mouse_genomes_project 4 41802617 41814025 + protein_coding processed_transcript MGP_129S1SvImJ_T0065433.1 MGP_129S1SvImJ_G0028221.1 mouse_genomes_project 4 41807172 41818926 + protein_coding processed_transcript MGP_129S1SvImJ_T0065434.1 MGP_129S1SvImJ_G0028221.1 mouse_genomes_project 4 41822413 41823220 + protein_coding processed_transcript MGP_129S1SvImJ_T0065933.1 MGP_129S1SvImJ_G0028350.1 mouse_genomes_project 4 61377725 61394255 - MGP_129S1SvImJ_P0065933 Cdc26 protein_coding protein_coding MGP_129S1SvImJ_T0065934.1 MGP_129S1SvImJ_G0028350.1 mouse_genomes_project 4 61377776 61394238 - MGP_129S1SvImJ_P0065934 Cdc26 protein_coding protein_coding MGP_129S1SvImJ_T0065935.1 MGP_129S1SvImJ_G0028350.1 mouse_genomes_project 4 61384006 61388691 - Cdc26 protein_coding retained_intron MGP_129S1SvImJ_T0065087.1 MGP_129S1SvImJ_G0028151.1 mouse_genomes_project 4 38859086 38880400 + MGP_129S1SvImJ_P0065087 Chmp5 protein_coding protein_coding MGP_129S1SvImJ_T0065009.1 MGP_129S1SvImJ_G0028132.1 mouse_genomes_project 4 32363702 32373385 - MGP_129S1SvImJ_P0065009 Smim8 protein_coding protein_coding MGP_129S1SvImJ_T0065010.1 MGP_129S1SvImJ_G0028132.1 mouse_genomes_project 4 32363702 32373400 - MGP_129S1SvImJ_P0065010 Smim8 protein_coding protein_coding MGP_129S1SvImJ_T0065011.1 MGP_129S1SvImJ_G0028132.1 mouse_genomes_project 4 32363702 32373459 - MGP_129S1SvImJ_P0065011 Smim8 protein_coding protein_coding MGP_129S1SvImJ_T0065012.1 MGP_129S1SvImJ_G0028132.1 mouse_genomes_project 4 32363702 32373373 - MGP_129S1SvImJ_P0065012 Smim8 protein_coding protein_coding MGP_129S1SvImJ_T0065013.1 MGP_129S1SvImJ_G0028132.1 mouse_genomes_project 4 32363702 32373306 - MGP_129S1SvImJ_P0065013 Smim8 protein_coding protein_coding MGP_129S1SvImJ_T0065014.1 MGP_129S1SvImJ_G0028132.1 mouse_genomes_project 4 32363713 32373367 - Smim8 protein_coding processed_transcript MGP_129S1SvImJ_T0065015.1 MGP_129S1SvImJ_G0028132.1 mouse_genomes_project 4 32365926 32373391 - Smim8 protein_coding retained_intron MGP_129S1SvImJ_T0065016.1 MGP_129S1SvImJ_G0028132.1 mouse_genomes_project 4 32366284 32373254 - Smim8 protein_coding processed_transcript MGP_129S1SvImJ_T0069360.1 MGP_129S1SvImJ_G0029144.1 mouse_genomes_project 4 153525713 153598046 - MGP_129S1SvImJ_P0069360 Pik3cd protein_coding protein_coding MGP_129S1SvImJ_T0069361.1 MGP_129S1SvImJ_G0029144.1 mouse_genomes_project 4 153525713 153598056 - MGP_129S1SvImJ_P0069361 Pik3cd protein_coding protein_coding MGP_129S1SvImJ_T0069362.1 MGP_129S1SvImJ_G0029144.1 mouse_genomes_project 4 153525715 153600960 - MGP_129S1SvImJ_P0069362 Pik3cd protein_coding protein_coding MGP_129S1SvImJ_T0069363.1 MGP_129S1SvImJ_G0029144.1 mouse_genomes_project 4 153525715 153564575 - MGP_129S1SvImJ_P0069363 Pik3cd protein_coding protein_coding MGP_129S1SvImJ_T0069364.1 MGP_129S1SvImJ_G0029144.1 mouse_genomes_project 4 153525716 153566425 - MGP_129S1SvImJ_P0069364 Pik3cd protein_coding protein_coding MGP_129S1SvImJ_T0069365.1 MGP_129S1SvImJ_G0029144.1 mouse_genomes_project 4 153526371 153597953 - MGP_129S1SvImJ_P0069365 Pik3cd protein_coding protein_coding MGP_129S1SvImJ_T0069366.1 MGP_129S1SvImJ_G0029144.1 mouse_genomes_project 4 153527194 153549850 - MGP_129S1SvImJ_P0069366 Pik3cd protein_coding protein_coding MGP_129S1SvImJ_T0069367.1 MGP_129S1SvImJ_G0029144.1 mouse_genomes_project 4 153544234 153565567 - MGP_129S1SvImJ_P0069367 Pik3cd protein_coding protein_coding MGP_129S1SvImJ_T0069368.1 MGP_129S1SvImJ_G0029144.1 mouse_genomes_project 4 153544313 153566006 - MGP_129S1SvImJ_P0069368 Pik3cd protein_coding protein_coding MGP_129S1SvImJ_T0069369.1 MGP_129S1SvImJ_G0029144.1 mouse_genomes_project 4 153544475 153597952 - MGP_129S1SvImJ_P0069369 Pik3cd protein_coding protein_coding MGP_129S1SvImJ_T0069370.1 MGP_129S1SvImJ_G0029144.1 mouse_genomes_project 4 153544640 153597900 - MGP_129S1SvImJ_P0069370 Pik3cd protein_coding protein_coding MGP_129S1SvImJ_T0069371.1 MGP_129S1SvImJ_G0029144.1 mouse_genomes_project 4 153549718 153601929 - MGP_129S1SvImJ_P0069371 Pik3cd protein_coding protein_coding MGP_129S1SvImJ_T0069372.1 MGP_129S1SvImJ_G0029144.1 mouse_genomes_project 4 153563819 153566474 - Pik3cd protein_coding processed_transcript MGP_129S1SvImJ_T0069373.1 MGP_129S1SvImJ_G0029144.1 mouse_genomes_project 4 153564145 153600960 - Pik3cd protein_coding processed_transcript MGP_129S1SvImJ_T0004547.1 MGP_129S1SvImJ_G0003954.1 mouse_genomes_project 4 125390813 125402887 - Gm12905 antisense antisense MGP_129S1SvImJ_T0004548.1 MGP_129S1SvImJ_G0003954.1 mouse_genomes_project 4 125390981 125391260 - Gm12905 antisense antisense MGP_129S1SvImJ_T0065192.1 MGP_129S1SvImJ_G0028175.1 mouse_genomes_project 4 39736639 39740906 - MGP_129S1SvImJ_P0065192 Ccl27a protein_coding protein_coding MGP_129S1SvImJ_T0065197.1 MGP_129S1SvImJ_G0028175.1 mouse_genomes_project 4 39736671 39737364 - MGP_129S1SvImJ_P0065197 Ccl27a protein_coding protein_coding MGP_129S1SvImJ_T0004447.1 MGP_129S1SvImJ_G0003878.1 mouse_genomes_project 4 16983062 16990141 - 4930480G23Rik antisense antisense MGP_129S1SvImJ_T0014624.1 MGP_129S1SvImJ_G0012713.1 mouse_genomes_project 4 74349915 74350116 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069947.1 MGP_129S1SvImJ_G0029254.1 mouse_genomes_project 4 160619460 160628390 - MGP_129S1SvImJ_P0069947 Samd11 protein_coding protein_coding MGP_129S1SvImJ_T0069948.1 MGP_129S1SvImJ_G0029254.1 mouse_genomes_project 4 160620220 160627563 - MGP_129S1SvImJ_P0069948 Samd11 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0067426.1 MGP_129S1SvImJ_G0028678.1 mouse_genomes_project 4 119793422 119794371 + MGP_129S1SvImJ_P0067426 protein_coding protein_coding MGP_129S1SvImJ_T0101134.1 MGP_129S1SvImJ_G0039201.1 mouse_genomes_project 4 82661684 82661803 + Gm24884 snoRNA snoRNA MGP_129S1SvImJ_T0014782.1 MGP_129S1SvImJ_G0012871.1 mouse_genomes_project 4 125388167 125388715 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068697.1 MGP_129S1SvImJ_G0028967.1 mouse_genomes_project 4 139035270 139036984 + MGP_129S1SvImJ_P0068697 protein_coding protein_coding MGP_129S1SvImJ_T0011590.1 MGP_129S1SvImJ_G0009706.1 mouse_genomes_project 4 69607801 69608107 - Gm26320 misc_RNA misc_RNA MGP_129S1SvImJ_T0007879.1 MGP_129S1SvImJ_G0006444.1 mouse_genomes_project 4 63291811 63315875 - Gm11217 lincRNA lincRNA MGP_129S1SvImJ_T0067845.1 MGP_129S1SvImJ_G0028789.1 mouse_genomes_project 4 128578556 128689150 - MGP_129S1SvImJ_P0067845 Zmym4 protein_coding protein_coding MGP_129S1SvImJ_T0067846.1 MGP_129S1SvImJ_G0028789.1 mouse_genomes_project 4 128583114 128584925 - Zmym4 protein_coding processed_transcript MGP_129S1SvImJ_T0067847.1 MGP_129S1SvImJ_G0028789.1 mouse_genomes_project 4 128622094 128635050 - Zmym4 protein_coding processed_transcript MGP_129S1SvImJ_T0067848.1 MGP_129S1SvImJ_G0028789.1 mouse_genomes_project 4 128627295 128634938 - Zmym4 protein_coding processed_transcript MGP_129S1SvImJ_T0067849.1 MGP_129S1SvImJ_G0028789.1 mouse_genomes_project 4 128634767 128643015 - Zmym4 protein_coding processed_transcript MGP_129S1SvImJ_T0067850.1 MGP_129S1SvImJ_G0028789.1 mouse_genomes_project 4 128642653 128645328 - Zmym4 protein_coding processed_transcript MGP_129S1SvImJ_T0067851.1 MGP_129S1SvImJ_G0028789.1 mouse_genomes_project 4 128645326 128689195 - Zmym4 protein_coding processed_transcript MGP_129S1SvImJ_T0067852.1 MGP_129S1SvImJ_G0028789.1 mouse_genomes_project 4 128645359 128689219 - Zmym4 protein_coding processed_transcript MGP_129S1SvImJ_T0099809.1 MGP_129S1SvImJ_G0037876.1 mouse_genomes_project 4 7929756 7929911 - Gm22940 snRNA snRNA MGP_129S1SvImJ_T0014409.1 MGP_129S1SvImJ_G0012498.1 mouse_genomes_project 4 3575335 3575803 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066660.1 MGP_129S1SvImJ_G0028526.1 mouse_genomes_project 4 107377187 107391590 + MGP_129S1SvImJ_P0066660 Fam151a protein_coding protein_coding MGP_129S1SvImJ_T0065008.1 MGP_129S1SvImJ_G0028131.1 mouse_genomes_project 4 32336350 32350300 - MGP_129S1SvImJ_P0065008 Gm136 protein_coding protein_coding MGP_129S1SvImJ_T0014433.1 MGP_129S1SvImJ_G0012522.1 mouse_genomes_project 4 12338040 12338466 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064671.1 MGP_129S1SvImJ_G0028045.1 mouse_genomes_project 4 7501735 7529443 + MGP_129S1SvImJ_P0064671 2610301B20Rik protein_coding protein_coding MGP_129S1SvImJ_T0064672.1 MGP_129S1SvImJ_G0028045.1 mouse_genomes_project 4 7501762 7523500 + 2610301B20Rik protein_coding processed_transcript MGP_129S1SvImJ_T0064673.1 MGP_129S1SvImJ_G0028045.1 mouse_genomes_project 4 7501802 7528102 + 2610301B20Rik protein_coding processed_transcript MGP_129S1SvImJ_T0064674.1 MGP_129S1SvImJ_G0028045.1 mouse_genomes_project 4 7501805 7529447 + MGP_129S1SvImJ_P0064674 2610301B20Rik protein_coding protein_coding MGP_129S1SvImJ_T0064675.1 MGP_129S1SvImJ_G0028045.1 mouse_genomes_project 4 7506901 7521927 + 2610301B20Rik protein_coding processed_transcript MGP_129S1SvImJ_T0065873.1 MGP_129S1SvImJ_G0028329.1 mouse_genomes_project 4 57839238 57860880 - MGP_129S1SvImJ_P0065873 Ptgr1 protein_coding protein_coding MGP_129S1SvImJ_T0065438.1 MGP_129S1SvImJ_G0028224.1 mouse_genomes_project 4 41866180 41867632 + MGP_129S1SvImJ_P0065438 Hrct1 protein_coding protein_coding MGP_129S1SvImJ_T0101109.1 MGP_129S1SvImJ_G0039176.1 mouse_genomes_project 4 46327328 46327471 + Gm22670 snoRNA snoRNA MGP_129S1SvImJ_T0066500.1 MGP_129S1SvImJ_G0028490.1 mouse_genomes_project 4 101349325 101432170 + MGP_129S1SvImJ_P0066500 Raver2 protein_coding protein_coding MGP_129S1SvImJ_T0066501.1 MGP_129S1SvImJ_G0028490.1 mouse_genomes_project 4 101349325 101415158 + MGP_129S1SvImJ_P0066501 Raver2 protein_coding protein_coding MGP_129S1SvImJ_T0066502.1 MGP_129S1SvImJ_G0028490.1 mouse_genomes_project 4 101349821 101384406 + Raver2 protein_coding processed_transcript MGP_129S1SvImJ_T0010653.1 MGP_129S1SvImJ_G0008769.1 mouse_genomes_project 4 137850813 137850892 - Mir700 miRNA miRNA MGP_129S1SvImJ_T0014742.1 MGP_129S1SvImJ_G0012831.1 mouse_genomes_project 4 116487479 116488571 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065783.1 MGP_129S1SvImJ_G0028308.1 mouse_genomes_project 4 55500041 55501349 + MGP_129S1SvImJ_P0065783 Gm26657 protein_coding protein_coding MGP_129S1SvImJ_T0068347.1 MGP_129S1SvImJ_G0028889.1 mouse_genomes_project 4 135475569 135487496 + MGP_129S1SvImJ_P0068347 Map3k6 protein_coding protein_coding MGP_129S1SvImJ_T0068348.1 MGP_129S1SvImJ_G0028889.1 mouse_genomes_project 4 135481795 135482651 + Map3k6 protein_coding processed_transcript MGP_129S1SvImJ_T0068349.1 MGP_129S1SvImJ_G0028889.1 mouse_genomes_project 4 135481871 135482679 + Map3k6 protein_coding processed_transcript MGP_129S1SvImJ_T0068350.1 MGP_129S1SvImJ_G0028889.1 mouse_genomes_project 4 135485414 135487495 + Map3k6 protein_coding processed_transcript MGP_129S1SvImJ_T0014452.1 MGP_129S1SvImJ_G0012541.1 mouse_genomes_project 4 15841877 15843296 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008045.1 MGP_129S1SvImJ_G0006571.1 mouse_genomes_project 4 160132199 160138408 + Gm26840 lincRNA lincRNA MGP_129S1SvImJ_T0014502.1 MGP_129S1SvImJ_G0012591.1 mouse_genomes_project 4 30071298 30071673 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014513.1 MGP_129S1SvImJ_G0012602.1 mouse_genomes_project 4 32040832 32041124 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066334.1 MGP_129S1SvImJ_G0028452.1 mouse_genomes_project 4 94695759 94709207 - MGP_129S1SvImJ_P0066334 Lrrc19 protein_coding protein_coding MGP_129S1SvImJ_T0066335.1 MGP_129S1SvImJ_G0028452.1 mouse_genomes_project 4 94695759 94709235 - MGP_129S1SvImJ_P0066335 Lrrc19 protein_coding protein_coding MGP_129S1SvImJ_T0068460.1 MGP_129S1SvImJ_G0028913.1 mouse_genomes_project 4 136461775 136463159 - MGP_129S1SvImJ_P0068460 Sh3bgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0068461.1 MGP_129S1SvImJ_G0028913.1 mouse_genomes_project 4 136461782 136463109 - MGP_129S1SvImJ_P0068461 Sh3bgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0068462.1 MGP_129S1SvImJ_G0028913.1 mouse_genomes_project 4 136462209 136463107 - Sh3bgrl3 protein_coding retained_intron MGP_129S1SvImJ_T0067250.1 MGP_129S1SvImJ_G0028642.1 mouse_genomes_project 4 118053609 118074362 + MGP_129S1SvImJ_P0067250 Ptch2 protein_coding protein_coding MGP_129S1SvImJ_T0067251.1 MGP_129S1SvImJ_G0028642.1 mouse_genomes_project 4 118053630 118074362 + MGP_129S1SvImJ_P0067251 Ptch2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067252.1 MGP_129S1SvImJ_G0028642.1 mouse_genomes_project 4 118062454 118063829 + Ptch2 protein_coding retained_intron MGP_129S1SvImJ_T0067253.1 MGP_129S1SvImJ_G0028642.1 mouse_genomes_project 4 118062772 118067682 + MGP_129S1SvImJ_P0067253 Ptch2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067254.1 MGP_129S1SvImJ_G0028642.1 mouse_genomes_project 4 118069402 118070256 + Ptch2 protein_coding retained_intron MGP_129S1SvImJ_T0067255.1 MGP_129S1SvImJ_G0028642.1 mouse_genomes_project 4 118072402 118075080 + Ptch2 protein_coding retained_intron MGP_129S1SvImJ_T0069144.1 MGP_129S1SvImJ_G0029096.1 mouse_genomes_project 4 147995385 148004868 - MGP_129S1SvImJ_P0069144 Gm13177 protein_coding protein_coding MGP_129S1SvImJ_T0068067.1 MGP_129S1SvImJ_G0028835.1 mouse_genomes_project 4 131563650 131578402 - MGP_129S1SvImJ_P0068067 Txlna protein_coding protein_coding MGP_129S1SvImJ_T0068068.1 MGP_129S1SvImJ_G0028835.1 mouse_genomes_project 4 131563655 131577979 - Txlna protein_coding retained_intron MGP_129S1SvImJ_T0068069.1 MGP_129S1SvImJ_G0028835.1 mouse_genomes_project 4 131563655 131578142 - MGP_129S1SvImJ_P0068069 Txlna protein_coding protein_coding MGP_129S1SvImJ_T0068070.1 MGP_129S1SvImJ_G0028835.1 mouse_genomes_project 4 131569734 131578402 - MGP_129S1SvImJ_P0068070 Txlna protein_coding protein_coding MGP_129S1SvImJ_T0068071.1 MGP_129S1SvImJ_G0028835.1 mouse_genomes_project 4 131571949 131578315 - MGP_129S1SvImJ_P0068071 Txlna protein_coding protein_coding MGP_129S1SvImJ_T0068072.1 MGP_129S1SvImJ_G0028835.1 mouse_genomes_project 4 131571965 131578296 - MGP_129S1SvImJ_P0068072 Txlna protein_coding protein_coding MGP_129S1SvImJ_T0068073.1 MGP_129S1SvImJ_G0028835.1 mouse_genomes_project 4 131576800 131578297 - MGP_129S1SvImJ_P0068073 Txlna protein_coding protein_coding MGP_129S1SvImJ_T0068334.1 MGP_129S1SvImJ_G0028886.1 mouse_genomes_project 4 135355620 135431604 + MGP_129S1SvImJ_P0068334 Wasf2 protein_coding protein_coding MGP_129S1SvImJ_T0068335.1 MGP_129S1SvImJ_G0028886.1 mouse_genomes_project 4 135355655 135415782 + MGP_129S1SvImJ_P0068335 Wasf2 protein_coding protein_coding MGP_129S1SvImJ_T0068336.1 MGP_129S1SvImJ_G0028886.1 mouse_genomes_project 4 135355744 135407249 + Wasf2 protein_coding processed_transcript MGP_129S1SvImJ_T0068337.1 MGP_129S1SvImJ_G0028886.1 mouse_genomes_project 4 135406689 135407301 + Wasf2 protein_coding processed_transcript MGP_129S1SvImJ_T0068338.1 MGP_129S1SvImJ_G0028886.1 mouse_genomes_project 4 135407059 135428352 + MGP_129S1SvImJ_P0068338 Wasf2 protein_coding protein_coding MGP_129S1SvImJ_T0068339.1 MGP_129S1SvImJ_G0028886.1 mouse_genomes_project 4 135420942 135422474 + Wasf2 protein_coding processed_transcript MGP_129S1SvImJ_T0007951.1 MGP_129S1SvImJ_G0006503.1 mouse_genomes_project 4 125838194 125845403 - 4933435F18Rik lincRNA lincRNA MGP_129S1SvImJ_T0007952.1 MGP_129S1SvImJ_G0006503.1 mouse_genomes_project 4 125843230 125845362 - 4933435F18Rik lincRNA lincRNA MGP_129S1SvImJ_T0004549.1 MGP_129S1SvImJ_G0003955.1 mouse_genomes_project 4 126053411 126195940 - Gm27247 antisense antisense MGP_129S1SvImJ_T0018102.1 MGP_129S1SvImJ_G0015561.1 mouse_genomes_project 4 96059282 96068964 - 9530080O11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018103.1 MGP_129S1SvImJ_G0015561.1 mouse_genomes_project 4 96059817 96068344 - 9530080O11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0014639.1 MGP_129S1SvImJ_G0012728.1 mouse_genomes_project 4 79390719 79391122 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067698.1 MGP_129S1SvImJ_G0028754.1 mouse_genomes_project 4 126355589 126408685 + MGP_129S1SvImJ_P0067698 Mtf1 protein_coding protein_coding MGP_129S1SvImJ_T0067699.1 MGP_129S1SvImJ_G0028754.1 mouse_genomes_project 4 126356034 126409106 + MGP_129S1SvImJ_P0067699 Mtf1 protein_coding protein_coding MGP_129S1SvImJ_T0067700.1 MGP_129S1SvImJ_G0028754.1 mouse_genomes_project 4 126356034 126373470 + MGP_129S1SvImJ_P0067700 Mtf1 protein_coding protein_coding MGP_129S1SvImJ_T0067701.1 MGP_129S1SvImJ_G0028754.1 mouse_genomes_project 4 126356067 126358846 + Mtf1 protein_coding retained_intron MGP_129S1SvImJ_T0067702.1 MGP_129S1SvImJ_G0028754.1 mouse_genomes_project 4 126356163 126358208 + MGP_129S1SvImJ_P0067702 Mtf1 protein_coding protein_coding MGP_129S1SvImJ_T0068901.1 MGP_129S1SvImJ_G0029018.1 mouse_genomes_project 4 142184788 142304311 + MGP_129S1SvImJ_P0068901 Ubr4 protein_coding protein_coding MGP_129S1SvImJ_T0068903.1 MGP_129S1SvImJ_G0029018.1 mouse_genomes_project 4 142212979 142325093 + MGP_129S1SvImJ_P0068903 Ubr4 protein_coding protein_coding MGP_129S1SvImJ_T0068904.1 MGP_129S1SvImJ_G0029018.1 mouse_genomes_project 4 142212979 142325151 + MGP_129S1SvImJ_P0068904 Ubr4 protein_coding protein_coding MGP_129S1SvImJ_T0068905.1 MGP_129S1SvImJ_G0029018.1 mouse_genomes_project 4 142212989 142229851 + Ubr4 protein_coding processed_transcript MGP_129S1SvImJ_T0068906.1 MGP_129S1SvImJ_G0029018.1 mouse_genomes_project 4 142246614 142286483 + MGP_129S1SvImJ_P0068906 Ubr4 protein_coding protein_coding MGP_129S1SvImJ_T0068907.1 MGP_129S1SvImJ_G0029018.1 mouse_genomes_project 4 142248356 142249171 + Ubr4 protein_coding retained_intron MGP_129S1SvImJ_T0068908.1 MGP_129S1SvImJ_G0029018.1 mouse_genomes_project 4 142269519 142272652 + MGP_129S1SvImJ_P0068908 Ubr4 protein_coding protein_coding MGP_129S1SvImJ_T0068909.1 MGP_129S1SvImJ_G0029018.1 mouse_genomes_project 4 142297806 142298523 + Ubr4 protein_coding retained_intron MGP_129S1SvImJ_T0068910.1 MGP_129S1SvImJ_G0029018.1 mouse_genomes_project 4 142311600 142316389 + Ubr4 protein_coding retained_intron MGP_129S1SvImJ_T0068911.1 MGP_129S1SvImJ_G0029018.1 mouse_genomes_project 4 142314522 142318179 + Ubr4 protein_coding processed_transcript MGP_129S1SvImJ_T0068912.1 MGP_129S1SvImJ_G0029018.1 mouse_genomes_project 4 142314705 142316632 + Ubr4 protein_coding retained_intron MGP_129S1SvImJ_T0068913.1 MGP_129S1SvImJ_G0029018.1 mouse_genomes_project 4 142315958 142318261 + Ubr4 protein_coding retained_intron MGP_129S1SvImJ_T0067222.1 MGP_129S1SvImJ_G0028636.1 mouse_genomes_project 4 117740693 117753384 + MGP_129S1SvImJ_P0067222 Mutyh protein_coding protein_coding MGP_129S1SvImJ_T0067223.1 MGP_129S1SvImJ_G0028636.1 mouse_genomes_project 4 117740695 117749609 + MGP_129S1SvImJ_P0067223 Mutyh protein_coding protein_coding MGP_129S1SvImJ_T0067224.1 MGP_129S1SvImJ_G0028636.1 mouse_genomes_project 4 117740708 117753391 + Mutyh protein_coding retained_intron MGP_129S1SvImJ_T0067225.1 MGP_129S1SvImJ_G0028636.1 mouse_genomes_project 4 117740718 117752725 + Mutyh protein_coding retained_intron MGP_129S1SvImJ_T0067226.1 MGP_129S1SvImJ_G0028636.1 mouse_genomes_project 4 117748271 117753336 + MGP_129S1SvImJ_P0067226 Mutyh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067227.1 MGP_129S1SvImJ_G0028636.1 mouse_genomes_project 4 117748329 117750992 + Mutyh protein_coding retained_intron MGP_129S1SvImJ_T0067228.1 MGP_129S1SvImJ_G0028636.1 mouse_genomes_project 4 117751650 117753393 + Mutyh protein_coding retained_intron MGP_129S1SvImJ_T0014455.1 MGP_129S1SvImJ_G0012544.1 mouse_genomes_project 4 16307934 16308786 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068772.1 MGP_129S1SvImJ_G0028987.1 mouse_genomes_project 4 140404458 140460196 - MGP_129S1SvImJ_P0068772 Alpl protein_coding protein_coding MGP_129S1SvImJ_T0068773.1 MGP_129S1SvImJ_G0028987.1 mouse_genomes_project 4 140409145 140409873 - Alpl protein_coding processed_transcript MGP_129S1SvImJ_T0068774.1 MGP_129S1SvImJ_G0028987.1 mouse_genomes_project 4 140415277 140429166 - MGP_129S1SvImJ_P0068774 Alpl protein_coding protein_coding MGP_129S1SvImJ_T0068775.1 MGP_129S1SvImJ_G0028987.1 mouse_genomes_project 4 140416590 140445994 - MGP_129S1SvImJ_P0068775 Alpl protein_coding protein_coding MGP_129S1SvImJ_T0068776.1 MGP_129S1SvImJ_G0028987.1 mouse_genomes_project 4 140417809 140449174 - MGP_129S1SvImJ_P0068776 Alpl protein_coding protein_coding MGP_129S1SvImJ_T0068777.1 MGP_129S1SvImJ_G0028987.1 mouse_genomes_project 4 140418353 140460042 - Alpl protein_coding processed_transcript MGP_129S1SvImJ_T0068778.1 MGP_129S1SvImJ_G0028987.1 mouse_genomes_project 4 140421399 140432306 - Alpl protein_coding processed_transcript MGP_129S1SvImJ_T0068779.1 MGP_129S1SvImJ_G0028987.1 mouse_genomes_project 4 140421399 140432511 - Alpl protein_coding processed_transcript MGP_129S1SvImJ_T0066759.1 MGP_129S1SvImJ_G0028541.1 mouse_genomes_project 4 108357106 108366768 - MGP_129S1SvImJ_P0066759 Dmrtb1 protein_coding protein_coding MGP_129S1SvImJ_T0066760.1 MGP_129S1SvImJ_G0028541.1 mouse_genomes_project 4 108357108 108367418 - MGP_129S1SvImJ_P0066760 Dmrtb1 protein_coding protein_coding MGP_129S1SvImJ_T0066761.1 MGP_129S1SvImJ_G0028541.1 mouse_genomes_project 4 108357720 108361583 - Dmrtb1 protein_coding retained_intron MGP_129S1SvImJ_T0004535.1 MGP_129S1SvImJ_G0003944.1 mouse_genomes_project 4 118992326 119012761 + 9530034E10Rik antisense antisense MGP_129S1SvImJ_T0004582.1 MGP_129S1SvImJ_G0003982.1 mouse_genomes_project 4 143028825 143030296 + Gm13027 antisense antisense MGP_129S1SvImJ_T0064893.1 MGP_129S1SvImJ_G0028104.1 mouse_genomes_project 4 22713580 22922285 - MGP_129S1SvImJ_P0064893 Fut9 protein_coding protein_coding MGP_129S1SvImJ_T0064894.1 MGP_129S1SvImJ_G0028104.1 mouse_genomes_project 4 22723142 22922383 - MGP_129S1SvImJ_P0064894 Fut9 protein_coding protein_coding MGP_129S1SvImJ_T0064895.1 MGP_129S1SvImJ_G0028104.1 mouse_genomes_project 4 22919841 22921994 - Fut9 protein_coding processed_transcript MGP_129S1SvImJ_T0066305.1 MGP_129S1SvImJ_G0028444.1 mouse_genomes_project 4 90194889 90201815 + MGP_129S1SvImJ_P0066305 Zfp352 protein_coding protein_coding MGP_129S1SvImJ_T0066306.1 MGP_129S1SvImJ_G0028444.1 mouse_genomes_project 4 90199739 90201395 + MGP_129S1SvImJ_P0066306 Zfp352 protein_coding protein_coding MGP_129S1SvImJ_T0014607.1 MGP_129S1SvImJ_G0012696.1 mouse_genomes_project 4 68467524 68471017 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014735.1 MGP_129S1SvImJ_G0012824.1 mouse_genomes_project 4 112648192 112649185 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064678.1 MGP_129S1SvImJ_G0028047.1 mouse_genomes_project 4 7691479 7717733 - MGP_129S1SvImJ_P0064678 Ndufaf6 protein_coding protein_coding MGP_129S1SvImJ_T0064679.1 MGP_129S1SvImJ_G0028047.1 mouse_genomes_project 4 7691484 7700921 - Ndufaf6 protein_coding processed_transcript MGP_129S1SvImJ_T0064680.1 MGP_129S1SvImJ_G0028047.1 mouse_genomes_project 4 7691647 7717678 - Ndufaf6 protein_coding processed_transcript MGP_129S1SvImJ_T0064681.1 MGP_129S1SvImJ_G0028047.1 mouse_genomes_project 4 7700910 7717678 - Ndufaf6 protein_coding processed_transcript MGP_129S1SvImJ_T0064682.1 MGP_129S1SvImJ_G0028047.1 mouse_genomes_project 4 7703889 7717712 - Ndufaf6 protein_coding processed_transcript MGP_129S1SvImJ_T0064683.1 MGP_129S1SvImJ_G0028047.1 mouse_genomes_project 4 7711782 7717734 - Ndufaf6 protein_coding processed_transcript MGP_129S1SvImJ_T0064684.1 MGP_129S1SvImJ_G0028047.1 mouse_genomes_project 4 7714520 7717717 - Ndufaf6 protein_coding processed_transcript MGP_129S1SvImJ_T0004506.1 MGP_129S1SvImJ_G0003922.1 mouse_genomes_project 4 99927407 99980946 - Gm12682 antisense antisense MGP_129S1SvImJ_T0014793.1 MGP_129S1SvImJ_G0012882.1 mouse_genomes_project 4 128784581 128785007 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010648.1 MGP_129S1SvImJ_G0008764.1 mouse_genomes_project 4 135606364 135606453 + Mir5122 miRNA miRNA MGP_129S1SvImJ_T0101153.1 MGP_129S1SvImJ_G0039220.1 mouse_genomes_project 4 124733919 124734050 + Gm25788 snoRNA snoRNA MGP_129S1SvImJ_T0066285.1 MGP_129S1SvImJ_G0028427.1 mouse_genomes_project 4 88509812 88510631 - MGP_129S1SvImJ_P0066285 Ifna13 protein_coding protein_coding MGP_129S1SvImJ_T0007877.1 MGP_129S1SvImJ_G0006442.1 mouse_genomes_project 4 62655912 62660932 + Gm11482 lincRNA lincRNA MGP_129S1SvImJ_T0068396.1 MGP_129S1SvImJ_G0028904.1 mouse_genomes_project 4 135970027 136047722 - MGP_129S1SvImJ_P0068396 Arid1a protein_coding protein_coding MGP_129S1SvImJ_T0068397.1 MGP_129S1SvImJ_G0028904.1 mouse_genomes_project 4 135970027 136047722 - MGP_129S1SvImJ_P0068397 Arid1a protein_coding protein_coding MGP_129S1SvImJ_T0068398.1 MGP_129S1SvImJ_G0028904.1 mouse_genomes_project 4 135970960 136050653 - MGP_129S1SvImJ_P0068398 Arid1a protein_coding protein_coding MGP_129S1SvImJ_T0068399.1 MGP_129S1SvImJ_G0028904.1 mouse_genomes_project 4 135980501 136015482 - Arid1a protein_coding retained_intron MGP_129S1SvImJ_T0068400.1 MGP_129S1SvImJ_G0028904.1 mouse_genomes_project 4 136011778 136013200 - Arid1a protein_coding retained_intron MGP_129S1SvImJ_T0068401.1 MGP_129S1SvImJ_G0028904.1 mouse_genomes_project 4 136013202 136016311 - MGP_129S1SvImJ_P0068401 Arid1a protein_coding protein_coding MGP_129S1SvImJ_T0069688.1 MGP_129S1SvImJ_G0029202.1 mouse_genomes_project 4 159207140 159213137 - MGP_129S1SvImJ_P0069688 Tnfrsf14 protein_coding protein_coding MGP_129S1SvImJ_T0069689.1 MGP_129S1SvImJ_G0029202.1 mouse_genomes_project 4 159207140 159213012 - MGP_129S1SvImJ_P0069689 Tnfrsf14 protein_coding protein_coding MGP_129S1SvImJ_T0069690.1 MGP_129S1SvImJ_G0029202.1 mouse_genomes_project 4 159207174 159212981 - MGP_129S1SvImJ_P0069690 Tnfrsf14 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0069691.1 MGP_129S1SvImJ_G0029202.1 mouse_genomes_project 4 159207191 159213487 - MGP_129S1SvImJ_P0069691 Tnfrsf14 protein_coding protein_coding MGP_129S1SvImJ_T0069692.1 MGP_129S1SvImJ_G0029202.1 mouse_genomes_project 4 159209401 159213487 - Tnfrsf14 protein_coding processed_transcript MGP_129S1SvImJ_T0069693.1 MGP_129S1SvImJ_G0029202.1 mouse_genomes_project 4 159211562 159213498 - Tnfrsf14 protein_coding processed_transcript MGP_129S1SvImJ_T0102550.1 MGP_129S1SvImJ_G0040383.1 mouse_genomes_project 4 146704278 146704779 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0098934.1 MGP_129S1SvImJ_G0037012.1 mouse_genomes_project 4 95217136 95224974 + Gm28096 sense_intronic sense_intronic MGP_129S1SvImJ_T0099841.1 MGP_129S1SvImJ_G0037908.1 mouse_genomes_project 4 85787313 85787414 - Gm25811 snRNA snRNA MGP_129S1SvImJ_T0007907.1 MGP_129S1SvImJ_G0006468.1 mouse_genomes_project 4 95263539 95280135 + Gm12708 lincRNA lincRNA MGP_129S1SvImJ_T0007908.1 MGP_129S1SvImJ_G0006468.1 mouse_genomes_project 4 95263588 95276656 + Gm12708 lincRNA lincRNA MGP_129S1SvImJ_T0014476.1 MGP_129S1SvImJ_G0012565.1 mouse_genomes_project 4 22664414 22665723 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068006.1 MGP_129S1SvImJ_G0028826.1 mouse_genomes_project 4 131436910 131439313 + MGP_129S1SvImJ_P0068006 Marcksl1 protein_coding protein_coding MGP_129S1SvImJ_T0065181.1 MGP_129S1SvImJ_G0028173.1 mouse_genomes_project 4 39727079 39736648 + MGP_129S1SvImJ_P0065181 protein_coding protein_coding MGP_129S1SvImJ_T0065182.1 MGP_129S1SvImJ_G0028173.1 mouse_genomes_project 4 39727337 39736648 + MGP_129S1SvImJ_P0065182 protein_coding protein_coding MGP_129S1SvImJ_T0065183.1 MGP_129S1SvImJ_G0028173.1 mouse_genomes_project 4 39727381 39733118 + protein_coding retained_intron MGP_129S1SvImJ_T0065184.1 MGP_129S1SvImJ_G0028173.1 mouse_genomes_project 4 39727395 39731001 + protein_coding retained_intron MGP_129S1SvImJ_T0065185.1 MGP_129S1SvImJ_G0028173.1 mouse_genomes_project 4 39729192 39736648 + MGP_129S1SvImJ_P0065185 protein_coding protein_coding MGP_129S1SvImJ_T0065186.1 MGP_129S1SvImJ_G0028173.1 mouse_genomes_project 4 39729278 39735234 + protein_coding retained_intron MGP_129S1SvImJ_T0065189.1 MGP_129S1SvImJ_G0028173.1 mouse_genomes_project 4 39734972 39736648 + protein_coding retained_intron MGP_129S1SvImJ_T0065190.1 MGP_129S1SvImJ_G0028173.1 mouse_genomes_project 4 39735107 39735642 + protein_coding retained_intron MGP_129S1SvImJ_T0065191.1 MGP_129S1SvImJ_G0028173.1 mouse_genomes_project 4 39735621 39736648 + protein_coding retained_intron MGP_129S1SvImJ_T0018082.1 MGP_129S1SvImJ_G0015547.1 mouse_genomes_project 4 51824798 51836985 - 4930412L05Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018083.1 MGP_129S1SvImJ_G0015547.1 mouse_genomes_project 4 51834254 51837281 - 4930412L05Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0067883.1 MGP_129S1SvImJ_G0028798.1 mouse_genomes_project 4 129103099 129106095 - MGP_129S1SvImJ_P0067883 Gjb4 protein_coding protein_coding MGP_129S1SvImJ_T0067884.1 MGP_129S1SvImJ_G0028798.1 mouse_genomes_project 4 129103099 129106095 - MGP_129S1SvImJ_P0067884 Gjb4 protein_coding protein_coding MGP_129S1SvImJ_T0004571.1 MGP_129S1SvImJ_G0003973.1 mouse_genomes_project 4 137736154 137738359 + Gm12984 antisense antisense MGP_129S1SvImJ_T0007857.1 MGP_129S1SvImJ_G0006425.1 mouse_genomes_project 4 52831427 52831925 - lincRNA lincRNA MGP_129S1SvImJ_T0064564.1 MGP_129S1SvImJ_G0028024.1 mouse_genomes_project 4 320437 325638 - MGP_129S1SvImJ_P0064564 Rps20 protein_coding protein_coding MGP_129S1SvImJ_T0064565.1 MGP_129S1SvImJ_G0028024.1 mouse_genomes_project 4 323587 325206 - Rps20 protein_coding retained_intron MGP_129S1SvImJ_T0064566.1 MGP_129S1SvImJ_G0028024.1 mouse_genomes_project 4 323590 325461 - Rps20 protein_coding retained_intron MGP_129S1SvImJ_T0064567.1 MGP_129S1SvImJ_G0028024.1 mouse_genomes_project 4 323618 325459 - MGP_129S1SvImJ_P0064567 Rps20 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0066286.1 MGP_129S1SvImJ_G0028428.1 mouse_genomes_project 4 88538104 88539038 - MGP_129S1SvImJ_P0066286 Ifna16 protein_coding protein_coding MGP_129S1SvImJ_T0010613.1 MGP_129S1SvImJ_G0008729.1 mouse_genomes_project 4 62264622 62264704 + Mir455 miRNA miRNA MGP_129S1SvImJ_T0014535.1 MGP_129S1SvImJ_G0012624.1 mouse_genomes_project 4 39058239 39058573 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010649.1 MGP_129S1SvImJ_G0008765.1 mouse_genomes_project 4 135826357 135826483 - Gm23158 miRNA miRNA MGP_129S1SvImJ_T0067582.1 MGP_129S1SvImJ_G0028718.1 mouse_genomes_project 4 122268087 122316910 - MGP_129S1SvImJ_P0067582 Smap2 protein_coding protein_coding MGP_129S1SvImJ_T0067583.1 MGP_129S1SvImJ_G0028718.1 mouse_genomes_project 4 122271651 122275472 - Smap2 protein_coding processed_transcript MGP_129S1SvImJ_T0066797.1 MGP_129S1SvImJ_G0028547.1 mouse_genomes_project 4 108726068 108747691 - MGP_129S1SvImJ_P0066797 Podn protein_coding protein_coding MGP_129S1SvImJ_T0066798.1 MGP_129S1SvImJ_G0028547.1 mouse_genomes_project 4 108726070 108739913 - MGP_129S1SvImJ_P0066798 Podn protein_coding protein_coding MGP_129S1SvImJ_T0066799.1 MGP_129S1SvImJ_G0028547.1 mouse_genomes_project 4 108726074 108744299 - MGP_129S1SvImJ_P0066799 Podn protein_coding protein_coding MGP_129S1SvImJ_T0066800.1 MGP_129S1SvImJ_G0028547.1 mouse_genomes_project 4 108726128 108747554 - MGP_129S1SvImJ_P0066800 Podn protein_coding protein_coding MGP_129S1SvImJ_T0066801.1 MGP_129S1SvImJ_G0028547.1 mouse_genomes_project 4 108726131 108747555 - Podn protein_coding processed_transcript MGP_129S1SvImJ_T0066802.1 MGP_129S1SvImJ_G0028547.1 mouse_genomes_project 4 108729004 108737124 - MGP_129S1SvImJ_P0066802 Podn protein_coding protein_coding MGP_129S1SvImJ_T0066803.1 MGP_129S1SvImJ_G0028547.1 mouse_genomes_project 4 108742619 108746587 - Podn protein_coding processed_transcript MGP_129S1SvImJ_T0066804.1 MGP_129S1SvImJ_G0028547.1 mouse_genomes_project 4 108742791 108747938 - Podn protein_coding processed_transcript MGP_129S1SvImJ_T0069320.1 MGP_129S1SvImJ_G0029137.1 mouse_genomes_project 4 153003833 153144489 - MGP_129S1SvImJ_P0069320 Kif1b protein_coding protein_coding MGP_129S1SvImJ_T0069321.1 MGP_129S1SvImJ_G0029137.1 mouse_genomes_project 4 153005533 153015238 - Kif1b protein_coding retained_intron MGP_129S1SvImJ_T0069322.1 MGP_129S1SvImJ_G0029137.1 mouse_genomes_project 4 153006378 153028746 - MGP_129S1SvImJ_P0069322 Kif1b protein_coding protein_coding MGP_129S1SvImJ_T0069323.1 MGP_129S1SvImJ_G0029137.1 mouse_genomes_project 4 153007749 153144303 - MGP_129S1SvImJ_P0069323 Kif1b protein_coding protein_coding MGP_129S1SvImJ_T0069324.1 MGP_129S1SvImJ_G0029137.1 mouse_genomes_project 4 153037959 153041690 - Kif1b protein_coding retained_intron MGP_129S1SvImJ_T0069325.1 MGP_129S1SvImJ_G0029137.1 mouse_genomes_project 4 153038358 153045435 - Kif1b protein_coding retained_intron MGP_129S1SvImJ_T0069326.1 MGP_129S1SvImJ_G0029137.1 mouse_genomes_project 4 153047338 153055879 - Kif1b protein_coding retained_intron MGP_129S1SvImJ_T0069327.1 MGP_129S1SvImJ_G0029137.1 mouse_genomes_project 4 153067302 153144420 - MGP_129S1SvImJ_P0069327 Kif1b protein_coding protein_coding MGP_129S1SvImJ_T0069328.1 MGP_129S1SvImJ_G0029137.1 mouse_genomes_project 4 153078872 153081495 - Kif1b protein_coding retained_intron MGP_129S1SvImJ_T0069329.1 MGP_129S1SvImJ_G0029137.1 mouse_genomes_project 4 153099793 153144490 - Kif1b protein_coding retained_intron MGP_129S1SvImJ_T0069330.1 MGP_129S1SvImJ_G0029137.1 mouse_genomes_project 4 153127356 153144461 - Kif1b protein_coding retained_intron MGP_129S1SvImJ_T0068830.1 MGP_129S1SvImJ_G0028999.1 mouse_genomes_project 4 141326743 141405941 - MGP_129S1SvImJ_P0068830 Vwa5b1 protein_coding protein_coding MGP_129S1SvImJ_T0068831.1 MGP_129S1SvImJ_G0028999.1 mouse_genomes_project 4 141328722 141342303 - MGP_129S1SvImJ_P0068831 Vwa5b1 protein_coding protein_coding MGP_129S1SvImJ_T0068832.1 MGP_129S1SvImJ_G0028999.1 mouse_genomes_project 4 141342849 141406092 - MGP_129S1SvImJ_P0068832 Vwa5b1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068833.1 MGP_129S1SvImJ_G0028999.1 mouse_genomes_project 4 141358082 141372657 - Vwa5b1 protein_coding processed_transcript MGP_129S1SvImJ_T0068834.1 MGP_129S1SvImJ_G0028999.1 mouse_genomes_project 4 141366270 141373126 - Vwa5b1 protein_coding processed_transcript MGP_129S1SvImJ_T0064900.1 MGP_129S1SvImJ_G0028106.1 mouse_genomes_project 4 23501773 23502638 - MGP_129S1SvImJ_P0064900 protein_coding protein_coding MGP_129S1SvImJ_T0065795.1 MGP_129S1SvImJ_G0028312.1 mouse_genomes_project 4 55573320 55632829 - MGP_129S1SvImJ_P0065795 Ctnnal1 protein_coding protein_coding MGP_129S1SvImJ_T0065796.1 MGP_129S1SvImJ_G0028312.1 mouse_genomes_project 4 55574525 55576704 - Ctnnal1 protein_coding processed_transcript MGP_129S1SvImJ_T0065797.1 MGP_129S1SvImJ_G0028312.1 mouse_genomes_project 4 55579372 55580040 - Ctnnal1 protein_coding processed_transcript MGP_129S1SvImJ_T0065798.1 MGP_129S1SvImJ_G0028312.1 mouse_genomes_project 4 55586407 55604194 - Ctnnal1 protein_coding processed_transcript MGP_129S1SvImJ_T0065799.1 MGP_129S1SvImJ_G0028312.1 mouse_genomes_project 4 55588352 55632809 - Ctnnal1 protein_coding processed_transcript MGP_129S1SvImJ_T0065800.1 MGP_129S1SvImJ_G0028312.1 mouse_genomes_project 4 55588615 55592207 - Ctnnal1 protein_coding processed_transcript MGP_129S1SvImJ_T0065801.1 MGP_129S1SvImJ_G0028312.1 mouse_genomes_project 4 55591878 55603102 - Ctnnal1 protein_coding processed_transcript MGP_129S1SvImJ_T0065802.1 MGP_129S1SvImJ_G0028312.1 mouse_genomes_project 4 55606125 55632795 - MGP_129S1SvImJ_P0065802 Ctnnal1 protein_coding protein_coding MGP_129S1SvImJ_T0065803.1 MGP_129S1SvImJ_G0028312.1 mouse_genomes_project 4 55610047 55612370 - Ctnnal1 protein_coding processed_transcript MGP_129S1SvImJ_T0099825.1 MGP_129S1SvImJ_G0037892.1 mouse_genomes_project 4 39249633 39249741 - Gm26049 snRNA snRNA MGP_129S1SvImJ_T0004556.1 MGP_129S1SvImJ_G0003961.1 mouse_genomes_project 4 130063504 130065451 + Hmgb4os antisense antisense MGP_129S1SvImJ_T0014561.1 MGP_129S1SvImJ_G0012650.1 mouse_genomes_project 4 49732752 49733109 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004443.1 MGP_129S1SvImJ_G0003876.1 mouse_genomes_project 4 11751565 11776801 + Gm11837 antisense antisense MGP_129S1SvImJ_T0004444.1 MGP_129S1SvImJ_G0003876.1 mouse_genomes_project 4 11753738 11776938 + Gm11837 antisense antisense MGP_129S1SvImJ_T0004445.1 MGP_129S1SvImJ_G0003876.1 mouse_genomes_project 4 11753753 11776813 + Gm11837 antisense antisense MGP_129S1SvImJ_T0099811.1 MGP_129S1SvImJ_G0037878.1 mouse_genomes_project 4 13782784 13782890 - Gm23975 snRNA snRNA MGP_129S1SvImJ_T0014583.1 MGP_129S1SvImJ_G0012672.1 mouse_genomes_project 4 54220846 54221273 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065984.1 MGP_129S1SvImJ_G0028362.1 mouse_genomes_project 4 62167411 62173839 - Kif12 protein_coding processed_transcript MGP_129S1SvImJ_T0065985.1 MGP_129S1SvImJ_G0028362.1 mouse_genomes_project 4 62167414 62173924 - MGP_129S1SvImJ_P0065985 Kif12 protein_coding protein_coding MGP_129S1SvImJ_T0065986.1 MGP_129S1SvImJ_G0028362.1 mouse_genomes_project 4 62169254 62172575 - Kif12 protein_coding processed_transcript MGP_129S1SvImJ_T0065987.1 MGP_129S1SvImJ_G0028362.1 mouse_genomes_project 4 62169506 62172967 - Kif12 protein_coding processed_transcript MGP_129S1SvImJ_T0065988.1 MGP_129S1SvImJ_G0028362.1 mouse_genomes_project 4 62171184 62173523 - Kif12 protein_coding processed_transcript MGP_129S1SvImJ_T0067683.1 MGP_129S1SvImJ_G0028749.1 mouse_genomes_project 4 126195577 126199426 + MGP_129S1SvImJ_P0067683 Pou3f1 protein_coding protein_coding MGP_129S1SvImJ_T0010618.1 MGP_129S1SvImJ_G0008734.1 mouse_genomes_project 4 87248126 87248268 + miRNA miRNA MGP_129S1SvImJ_T0101161.1 MGP_129S1SvImJ_G0039228.1 mouse_genomes_project 4 133303023 133303157 + Gm25261 snoRNA snoRNA MGP_129S1SvImJ_T0066838.1 MGP_129S1SvImJ_G0028555.1 mouse_genomes_project 4 109198199 109307744 + MGP_129S1SvImJ_P0066838 Zcchc11 protein_coding protein_coding MGP_129S1SvImJ_T0066839.1 MGP_129S1SvImJ_G0028555.1 mouse_genomes_project 4 109198199 109220253 + MGP_129S1SvImJ_P0066839 Zcchc11 protein_coding protein_coding MGP_129S1SvImJ_T0066840.1 MGP_129S1SvImJ_G0028555.1 mouse_genomes_project 4 109198783 109307750 + MGP_129S1SvImJ_P0066840 Zcchc11 protein_coding protein_coding MGP_129S1SvImJ_T0066841.1 MGP_129S1SvImJ_G0028555.1 mouse_genomes_project 4 109220180 109267048 + MGP_129S1SvImJ_P0066841 Zcchc11 protein_coding protein_coding MGP_129S1SvImJ_T0066842.1 MGP_129S1SvImJ_G0028555.1 mouse_genomes_project 4 109270551 109273390 + Zcchc11 protein_coding processed_transcript MGP_129S1SvImJ_T0066843.1 MGP_129S1SvImJ_G0028555.1 mouse_genomes_project 4 109289663 109295676 + Zcchc11 protein_coding processed_transcript MGP_129S1SvImJ_T0066844.1 MGP_129S1SvImJ_G0028555.1 mouse_genomes_project 4 109289762 109290630 + Zcchc11 protein_coding processed_transcript MGP_129S1SvImJ_T0066845.1 MGP_129S1SvImJ_G0028555.1 mouse_genomes_project 4 109289815 109290623 + Zcchc11 protein_coding processed_transcript MGP_129S1SvImJ_T0066846.1 MGP_129S1SvImJ_G0028555.1 mouse_genomes_project 4 109296474 109302395 + Zcchc11 protein_coding processed_transcript MGP_129S1SvImJ_T0066847.1 MGP_129S1SvImJ_G0028555.1 mouse_genomes_project 4 109302411 109307744 + Zcchc11 protein_coding processed_transcript MGP_129S1SvImJ_T0066848.1 MGP_129S1SvImJ_G0028555.1 mouse_genomes_project 4 109302695 109307382 + MGP_129S1SvImJ_P0066848 Zcchc11 protein_coding protein_coding MGP_129S1SvImJ_T0004450.1 MGP_129S1SvImJ_G0003881.1 mouse_genomes_project 4 26102216 26102996 - Gm11915 antisense antisense MGP_129S1SvImJ_T0068126.1 MGP_129S1SvImJ_G0028844.1 mouse_genomes_project 4 132116997 132125888 - MGP_129S1SvImJ_P0068126 Hcrtr1 protein_coding protein_coding MGP_129S1SvImJ_T0068127.1 MGP_129S1SvImJ_G0028844.1 mouse_genomes_project 4 132116997 132125277 - MGP_129S1SvImJ_P0068127 Hcrtr1 protein_coding protein_coding MGP_129S1SvImJ_T0068128.1 MGP_129S1SvImJ_G0028844.1 mouse_genomes_project 4 132116997 132126085 - MGP_129S1SvImJ_P0068128 Hcrtr1 protein_coding protein_coding MGP_129S1SvImJ_T0068129.1 MGP_129S1SvImJ_G0028844.1 mouse_genomes_project 4 132117621 132124381 - MGP_129S1SvImJ_P0068129 Hcrtr1 protein_coding protein_coding MGP_129S1SvImJ_T0007860.1 MGP_129S1SvImJ_G0006428.1 mouse_genomes_project 4 53828893 53985178 - Gm12514 lincRNA lincRNA MGP_129S1SvImJ_T0007861.1 MGP_129S1SvImJ_G0006428.1 mouse_genomes_project 4 53829130 53833190 - Gm12514 lincRNA lincRNA MGP_129S1SvImJ_T0007944.1 MGP_129S1SvImJ_G0006496.1 mouse_genomes_project 4 120133273 120153765 - lincRNA lincRNA MGP_129S1SvImJ_T0014747.1 MGP_129S1SvImJ_G0012836.1 mouse_genomes_project 4 117791984 117792431 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067629.1 MGP_129S1SvImJ_G0028736.1 mouse_genomes_project 4 124609896 124621363 + MGP_129S1SvImJ_P0067629 Hpcal4 protein_coding protein_coding MGP_129S1SvImJ_T0067630.1 MGP_129S1SvImJ_G0028736.1 mouse_genomes_project 4 124609908 124618175 + MGP_129S1SvImJ_P0067630 Hpcal4 protein_coding protein_coding MGP_129S1SvImJ_T0067631.1 MGP_129S1SvImJ_G0028736.1 mouse_genomes_project 4 124610168 124615460 + MGP_129S1SvImJ_P0067631 Hpcal4 protein_coding protein_coding MGP_129S1SvImJ_T0067632.1 MGP_129S1SvImJ_G0028736.1 mouse_genomes_project 4 124610185 124610821 + Hpcal4 protein_coding processed_transcript MGP_129S1SvImJ_T0067633.1 MGP_129S1SvImJ_G0028736.1 mouse_genomes_project 4 124610398 124617406 + MGP_129S1SvImJ_P0067633 Hpcal4 protein_coding protein_coding MGP_129S1SvImJ_T0014750.1 MGP_129S1SvImJ_G0012839.1 mouse_genomes_project 4 117965136 117965776 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099892.1 MGP_129S1SvImJ_G0037959.1 mouse_genomes_project 4 154278126 154278236 + Gm23209 snRNA snRNA MGP_129S1SvImJ_T0007840.1 MGP_129S1SvImJ_G0006412.1 mouse_genomes_project 4 40048974 40049467 + Gm21980 lincRNA lincRNA MGP_129S1SvImJ_T0010616.1 MGP_129S1SvImJ_G0008732.1 mouse_genomes_project 4 80521177 80521273 + Gm27452 miRNA miRNA MGP_129S1SvImJ_T0067609.1 MGP_129S1SvImJ_G0028729.1 mouse_genomes_project 4 124333888 124348178 - Mfsd2a protein_coding processed_transcript MGP_129S1SvImJ_T0067610.1 MGP_129S1SvImJ_G0028729.1 mouse_genomes_project 4 124333888 124348214 - MGP_129S1SvImJ_P0067610 Mfsd2a protein_coding protein_coding MGP_129S1SvImJ_T0067611.1 MGP_129S1SvImJ_G0028729.1 mouse_genomes_project 4 124343757 124347016 - Mfsd2a protein_coding processed_transcript MGP_129S1SvImJ_T0067612.1 MGP_129S1SvImJ_G0028729.1 mouse_genomes_project 4 124343784 124348214 - MGP_129S1SvImJ_P0067612 Mfsd2a protein_coding protein_coding MGP_129S1SvImJ_T0098594.1 MGP_129S1SvImJ_G0036679.1 mouse_genomes_project 4 112276404 112276520 - n-R5s191 rRNA rRNA MGP_129S1SvImJ_T0066052.1 MGP_129S1SvImJ_G0028382.1 mouse_genomes_project 4 69629085 69740406 - MGP_129S1SvImJ_P0066052 Megf9 protein_coding protein_coding MGP_129S1SvImJ_T0066053.1 MGP_129S1SvImJ_G0028382.1 mouse_genomes_project 4 69666115 69740473 - MGP_129S1SvImJ_P0066053 Megf9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066438.1 MGP_129S1SvImJ_G0028475.1 mouse_genomes_project 4 98995969 99001332 - MGP_129S1SvImJ_P0066438 I0C0044D17Rik protein_coding protein_coding MGP_129S1SvImJ_T0066439.1 MGP_129S1SvImJ_G0028475.1 mouse_genomes_project 4 98997307 98997817 - MGP_129S1SvImJ_P0066439 I0C0044D17Rik protein_coding protein_coding MGP_129S1SvImJ_T0064909.1 MGP_129S1SvImJ_G0028108.1 mouse_genomes_project 4 29409328 29467588 + MGP_129S1SvImJ_P0064909 Map3k7 protein_coding protein_coding MGP_129S1SvImJ_T0064910.1 MGP_129S1SvImJ_G0028108.1 mouse_genomes_project 4 29409471 29467594 + MGP_129S1SvImJ_P0064910 Map3k7 protein_coding protein_coding MGP_129S1SvImJ_T0064911.1 MGP_129S1SvImJ_G0028108.1 mouse_genomes_project 4 29422557 29432838 + Map3k7 protein_coding processed_transcript MGP_129S1SvImJ_T0064912.1 MGP_129S1SvImJ_G0028108.1 mouse_genomes_project 4 29425862 29430625 + Map3k7 protein_coding processed_transcript MGP_129S1SvImJ_T0064913.1 MGP_129S1SvImJ_G0028108.1 mouse_genomes_project 4 29427933 29436856 + Map3k7 protein_coding processed_transcript MGP_129S1SvImJ_T0064914.1 MGP_129S1SvImJ_G0028108.1 mouse_genomes_project 4 29430570 29460125 + Map3k7 protein_coding processed_transcript MGP_129S1SvImJ_T0064915.1 MGP_129S1SvImJ_G0028108.1 mouse_genomes_project 4 29436553 29463677 + Map3k7 protein_coding processed_transcript MGP_129S1SvImJ_T0067428.1 MGP_129S1SvImJ_G0028680.1 mouse_genomes_project 4 119827424 119828366 - MGP_129S1SvImJ_P0067428 Olfr1338 protein_coding protein_coding MGP_129S1SvImJ_T0069451.1 MGP_129S1SvImJ_G0029160.1 mouse_genomes_project 4 155026219 155031032 + MGP_129S1SvImJ_P0069451 Uts2 protein_coding protein_coding MGP_129S1SvImJ_T0007799.1 MGP_129S1SvImJ_G0006377.1 mouse_genomes_project 4 127963 134775 + 2210414B05Rik lincRNA lincRNA MGP_129S1SvImJ_T0067066.1 MGP_129S1SvImJ_G0028606.1 mouse_genomes_project 4 116574288 116613949 + MGP_129S1SvImJ_P0067066 Efcab14 protein_coding protein_coding MGP_129S1SvImJ_T0067067.1 MGP_129S1SvImJ_G0028606.1 mouse_genomes_project 4 116574323 116594886 + Efcab14 protein_coding processed_transcript MGP_129S1SvImJ_T0067068.1 MGP_129S1SvImJ_G0028606.1 mouse_genomes_project 4 116574323 116608605 + MGP_129S1SvImJ_P0067068 Efcab14 protein_coding protein_coding MGP_129S1SvImJ_T0067069.1 MGP_129S1SvImJ_G0028606.1 mouse_genomes_project 4 116574324 116590482 + Efcab14 protein_coding processed_transcript MGP_129S1SvImJ_T0067070.1 MGP_129S1SvImJ_G0028606.1 mouse_genomes_project 4 116574617 116616838 + MGP_129S1SvImJ_P0067070 Efcab14 protein_coding protein_coding MGP_129S1SvImJ_T0067071.1 MGP_129S1SvImJ_G0028606.1 mouse_genomes_project 4 116574987 116613592 + MGP_129S1SvImJ_P0067071 Efcab14 protein_coding protein_coding MGP_129S1SvImJ_T0067072.1 MGP_129S1SvImJ_G0028606.1 mouse_genomes_project 4 116604208 116614702 + Efcab14 protein_coding processed_transcript MGP_129S1SvImJ_T0008043.1 MGP_129S1SvImJ_G0006569.1 mouse_genomes_project 4 158931970 158932589 - Gm27202 lincRNA lincRNA MGP_129S1SvImJ_T0067721.1 MGP_129S1SvImJ_G0028760.1 mouse_genomes_project 4 126563153 126585792 + MGP_129S1SvImJ_P0067721 Rspo1 protein_coding protein_coding MGP_129S1SvImJ_T0067722.1 MGP_129S1SvImJ_G0028760.1 mouse_genomes_project 4 126584172 126585218 + Rspo1 protein_coding processed_transcript MGP_129S1SvImJ_T0065196.1 MGP_129S1SvImJ_G0028177.1 mouse_genomes_project 4 39736650 39737398 - MGP_129S1SvImJ_P0065196 Ccl27a protein_coding protein_coding MGP_129S1SvImJ_T0014751.1 MGP_129S1SvImJ_G0012840.1 mouse_genomes_project 4 118111607 118111811 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065220.1 MGP_129S1SvImJ_G0028191.1 mouse_genomes_project 4 40819863 40820529 - MGP_129S1SvImJ_P0065220 protein_coding protein_coding MGP_129S1SvImJ_T0007921.1 MGP_129S1SvImJ_G0006479.1 mouse_genomes_project 4 103632714 103634567 + Gm44037 lincRNA lincRNA MGP_129S1SvImJ_T0067099.1 MGP_129S1SvImJ_G0028614.1 mouse_genomes_project 4 116811970 116863913 - Faah protein_coding retained_intron MGP_129S1SvImJ_T0067100.1 MGP_129S1SvImJ_G0028614.1 mouse_genomes_project 4 116842127 116863954 - Faah protein_coding retained_intron MGP_129S1SvImJ_T0067101.1 MGP_129S1SvImJ_G0028614.1 mouse_genomes_project 4 116842127 116864164 - MGP_129S1SvImJ_P0067101 Faah protein_coding protein_coding MGP_129S1SvImJ_T0067102.1 MGP_129S1SvImJ_G0028614.1 mouse_genomes_project 4 116843651 116863965 - Faah protein_coding retained_intron MGP_129S1SvImJ_T0067103.1 MGP_129S1SvImJ_G0028614.1 mouse_genomes_project 4 116843764 116845525 - Faah protein_coding retained_intron MGP_129S1SvImJ_T0067104.1 MGP_129S1SvImJ_G0028614.1 mouse_genomes_project 4 116844172 116845394 - Faah protein_coding retained_intron MGP_129S1SvImJ_T0067105.1 MGP_129S1SvImJ_G0028614.1 mouse_genomes_project 4 116847181 116863913 - Faah protein_coding processed_transcript MGP_129S1SvImJ_T0067106.1 MGP_129S1SvImJ_G0028614.1 mouse_genomes_project 4 116851186 116863935 - Faah protein_coding processed_transcript MGP_129S1SvImJ_T0099834.1 MGP_129S1SvImJ_G0037901.1 mouse_genomes_project 4 61243043 61243150 + Gm23148 snRNA snRNA MGP_129S1SvImJ_T0011587.1 MGP_129S1SvImJ_G0009703.1 mouse_genomes_project 4 52363949 52364248 - Gm25445 misc_RNA misc_RNA MGP_129S1SvImJ_T0014634.1 MGP_129S1SvImJ_G0012723.1 mouse_genomes_project 4 76147211 76147448 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066878.1 MGP_129S1SvImJ_G0028565.1 mouse_genomes_project 4 109634636 109704205 + MGP_129S1SvImJ_P0066878 Rab3b protein_coding protein_coding MGP_129S1SvImJ_T0066879.1 MGP_129S1SvImJ_G0028565.1 mouse_genomes_project 4 109634773 109702062 + MGP_129S1SvImJ_P0066879 Rab3b protein_coding protein_coding MGP_129S1SvImJ_T0066880.1 MGP_129S1SvImJ_G0028565.1 mouse_genomes_project 4 109644550 109702065 + MGP_129S1SvImJ_P0066880 Rab3b protein_coding protein_coding MGP_129S1SvImJ_T0066881.1 MGP_129S1SvImJ_G0028565.1 mouse_genomes_project 4 109699976 109701782 + Rab3b protein_coding processed_transcript MGP_129S1SvImJ_T0067442.1 MGP_129S1SvImJ_G0028688.1 mouse_genomes_project 4 120351745 120356183 - MGP_129S1SvImJ_P0067442 Zfp691 protein_coding protein_coding MGP_129S1SvImJ_T0067443.1 MGP_129S1SvImJ_G0028688.1 mouse_genomes_project 4 120351745 120356522 - MGP_129S1SvImJ_P0067443 Zfp691 protein_coding protein_coding MGP_129S1SvImJ_T0067444.1 MGP_129S1SvImJ_G0028688.1 mouse_genomes_project 4 120351748 120356183 - MGP_129S1SvImJ_P0067444 Zfp691 protein_coding protein_coding MGP_129S1SvImJ_T0067445.1 MGP_129S1SvImJ_G0028688.1 mouse_genomes_project 4 120353224 120356183 - MGP_129S1SvImJ_P0067445 Zfp691 protein_coding protein_coding MGP_129S1SvImJ_T0010589.1 MGP_129S1SvImJ_G0008705.1 mouse_genomes_project 4 12837144 12837236 - Mir6400 miRNA miRNA MGP_129S1SvImJ_T0101114.1 MGP_129S1SvImJ_G0039181.1 mouse_genomes_project 4 52667432 52667563 + Gm24177 snoRNA snoRNA MGP_129S1SvImJ_T0065696.1 MGP_129S1SvImJ_G0028281.1 mouse_genomes_project 4 47972265 47987524 - MGP_129S1SvImJ_P0065696 Baat protein_coding protein_coding MGP_129S1SvImJ_T0065697.1 MGP_129S1SvImJ_G0028281.1 mouse_genomes_project 4 47972663 47984157 - MGP_129S1SvImJ_P0065697 Baat protein_coding protein_coding MGP_129S1SvImJ_T0010670.1 MGP_129S1SvImJ_G0008786.1 mouse_genomes_project 4 153391784 153391844 + Mir5616 miRNA miRNA MGP_129S1SvImJ_T0067746.1 MGP_129S1SvImJ_G0028768.1 mouse_genomes_project 4 127694746 127703343 + MGP_129S1SvImJ_P0067746 Mrps15 protein_coding protein_coding MGP_129S1SvImJ_T0067747.1 MGP_129S1SvImJ_G0028768.1 mouse_genomes_project 4 127694798 127699787 + Mrps15 protein_coding processed_transcript MGP_129S1SvImJ_T0067748.1 MGP_129S1SvImJ_G0028768.1 mouse_genomes_project 4 127695055 127698305 + Mrps15 protein_coding processed_transcript MGP_129S1SvImJ_T0010666.1 MGP_129S1SvImJ_G0008782.1 mouse_genomes_project 4 143673951 143674015 + Gm25951 miRNA miRNA MGP_129S1SvImJ_T0014670.1 MGP_129S1SvImJ_G0012759.1 mouse_genomes_project 4 91149112 91149724 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065917.1 MGP_129S1SvImJ_G0028345.1 mouse_genomes_project 4 61114031 61118135 - MGP_129S1SvImJ_P0065917 protein_coding protein_coding MGP_129S1SvImJ_T0101087.1 MGP_129S1SvImJ_G0039154.1 mouse_genomes_project 4 1248620 1248752 + Gm26436 snoRNA snoRNA MGP_129S1SvImJ_T0099890.1 MGP_129S1SvImJ_G0037957.1 mouse_genomes_project 4 152293224 152293332 + Gm23318 snRNA snRNA MGP_129S1SvImJ_T0066065.1 MGP_129S1SvImJ_G0028385.1 mouse_genomes_project 4 72060798 72062853 - MGP_129S1SvImJ_P0066065 Aldoart1 protein_coding protein_coding MGP_129S1SvImJ_T0066066.1 MGP_129S1SvImJ_G0028385.1 mouse_genomes_project 4 72060798 72062851 - MGP_129S1SvImJ_P0066066 Aldoart1 protein_coding protein_coding MGP_129S1SvImJ_T0065080.1 MGP_129S1SvImJ_G0028148.1 mouse_genomes_project 4 38709939 38760295 - MGP_129S1SvImJ_P0065080 B4galt1 protein_coding protein_coding MGP_129S1SvImJ_T0065081.1 MGP_129S1SvImJ_G0028148.1 mouse_genomes_project 4 38714480 38760295 - MGP_129S1SvImJ_P0065081 B4galt1 protein_coding protein_coding MGP_129S1SvImJ_T0010606.1 MGP_129S1SvImJ_G0008722.1 mouse_genomes_project 4 42791587 42791665 - Mir5120 miRNA miRNA MGP_129S1SvImJ_T0066105.1 MGP_129S1SvImJ_G0028394.1 mouse_genomes_project 4 79519708 79520852 + MGP_129S1SvImJ_P0066105 protein_coding protein_coding MGP_129S1SvImJ_T0014428.1 MGP_129S1SvImJ_G0012517.1 mouse_genomes_project 4 10361771 10362507 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014683.1 MGP_129S1SvImJ_G0012772.1 mouse_genomes_project 4 95641968 95642297 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004529.1 MGP_129S1SvImJ_G0003939.1 mouse_genomes_project 4 117758855 117767371 + Gm12996 antisense antisense MGP_129S1SvImJ_T0008027.1 MGP_129S1SvImJ_G0006553.1 mouse_genomes_project 4 144398039 144401087 + Gm13074 lincRNA lincRNA MGP_129S1SvImJ_T0101164.1 MGP_129S1SvImJ_G0039231.1 mouse_genomes_project 4 134449773 134449902 + Snora44 snoRNA snoRNA MGP_129S1SvImJ_T0008017.1 MGP_129S1SvImJ_G0006544.1 mouse_genomes_project 4 142799746 142813396 + Gm13028 lincRNA lincRNA MGP_129S1SvImJ_T0014544.1 MGP_129S1SvImJ_G0012633.1 mouse_genomes_project 4 44532269 44533038 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069305.1 MGP_129S1SvImJ_G0029133.1 mouse_genomes_project 4 152910261 152934271 + MGP_129S1SvImJ_P0069305 Dffa protein_coding protein_coding MGP_129S1SvImJ_T0069306.1 MGP_129S1SvImJ_G0029133.1 mouse_genomes_project 4 152910261 152931965 + MGP_129S1SvImJ_P0069306 Dffa protein_coding protein_coding MGP_129S1SvImJ_T0069307.1 MGP_129S1SvImJ_G0029133.1 mouse_genomes_project 4 152913875 152914341 + Dffa protein_coding processed_transcript MGP_129S1SvImJ_T0007966.1 MGP_129S1SvImJ_G0006509.1 mouse_genomes_project 4 129296173 129297437 + 1700080G11Rik lincRNA lincRNA MGP_129S1SvImJ_T0014617.1 MGP_129S1SvImJ_G0012706.1 mouse_genomes_project 4 72248283 72256543 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099861.1 MGP_129S1SvImJ_G0037928.1 mouse_genomes_project 4 117849516 117849621 + Gm26355 snRNA snRNA MGP_129S1SvImJ_T0068052.1 MGP_129S1SvImJ_G0028833.1 mouse_genomes_project 4 131552898 131556863 - MGP_129S1SvImJ_P0068052 protein_coding protein_coding MGP_129S1SvImJ_T0068053.1 MGP_129S1SvImJ_G0028833.1 mouse_genomes_project 4 131553532 131554794 - protein_coding processed_transcript MGP_129S1SvImJ_T0068054.1 MGP_129S1SvImJ_G0028833.1 mouse_genomes_project 4 131555102 131556840 - protein_coding retained_intron MGP_129S1SvImJ_T0068055.1 MGP_129S1SvImJ_G0028833.1 mouse_genomes_project 4 131555861 131556860 - MGP_129S1SvImJ_P0068055 protein_coding protein_coding MGP_129S1SvImJ_T0068056.1 MGP_129S1SvImJ_G0028833.1 mouse_genomes_project 4 131556005 131556844 - protein_coding processed_transcript MGP_129S1SvImJ_T0101156.1 MGP_129S1SvImJ_G0039223.1 mouse_genomes_project 4 128575424 128575557 - Gm25604 snoRNA snoRNA MGP_129S1SvImJ_T0065785.1 MGP_129S1SvImJ_G0028310.1 mouse_genomes_project 4 55509660 55564717 - MGP_129S1SvImJ_P0065785 Ikbkap protein_coding protein_coding MGP_129S1SvImJ_T0065786.1 MGP_129S1SvImJ_G0028310.1 mouse_genomes_project 4 55510992 55517289 - Ikbkap protein_coding retained_intron MGP_129S1SvImJ_T0065787.1 MGP_129S1SvImJ_G0028310.1 mouse_genomes_project 4 55510995 55523330 - Ikbkap protein_coding retained_intron MGP_129S1SvImJ_T0065788.1 MGP_129S1SvImJ_G0028310.1 mouse_genomes_project 4 55514858 55518395 - Ikbkap protein_coding retained_intron MGP_129S1SvImJ_T0065789.1 MGP_129S1SvImJ_G0028310.1 mouse_genomes_project 4 55527871 55532602 - Ikbkap protein_coding retained_intron MGP_129S1SvImJ_T0065790.1 MGP_129S1SvImJ_G0028310.1 mouse_genomes_project 4 55536451 55539725 - Ikbkap protein_coding retained_intron MGP_129S1SvImJ_T0066140.1 MGP_129S1SvImJ_G0028401.1 mouse_genomes_project 4 82472051 82634508 - MGP_129S1SvImJ_P0066140 Frem1 protein_coding protein_coding MGP_129S1SvImJ_T0066141.1 MGP_129S1SvImJ_G0028401.1 mouse_genomes_project 4 82472058 82601075 - MGP_129S1SvImJ_P0066141 Frem1 protein_coding protein_coding MGP_129S1SvImJ_T0066142.1 MGP_129S1SvImJ_G0028401.1 mouse_genomes_project 4 82472058 82634680 - MGP_129S1SvImJ_P0066142 Frem1 protein_coding protein_coding MGP_129S1SvImJ_T0066143.1 MGP_129S1SvImJ_G0028401.1 mouse_genomes_project 4 82474695 82488994 - Frem1 protein_coding processed_transcript MGP_129S1SvImJ_T0066144.1 MGP_129S1SvImJ_G0028401.1 mouse_genomes_project 4 82490192 82499351 - Frem1 protein_coding retained_intron MGP_129S1SvImJ_T0066145.1 MGP_129S1SvImJ_G0028401.1 mouse_genomes_project 4 82510929 82515701 - Frem1 protein_coding retained_intron MGP_129S1SvImJ_T0066146.1 MGP_129S1SvImJ_G0028401.1 mouse_genomes_project 4 82513246 82549558 - MGP_129S1SvImJ_P0066146 Frem1 protein_coding protein_coding MGP_129S1SvImJ_T0066147.1 MGP_129S1SvImJ_G0028401.1 mouse_genomes_project 4 82573272 82634680 - Frem1 protein_coding processed_transcript MGP_129S1SvImJ_T0014665.1 MGP_129S1SvImJ_G0012754.1 mouse_genomes_project 4 90341011 90342713 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004623.1 MGP_129S1SvImJ_G0004013.1 mouse_genomes_project 4 158177969 158180840 - BC039966 antisense antisense MGP_129S1SvImJ_T0099864.1 MGP_129S1SvImJ_G0037931.1 mouse_genomes_project 4 118166472 118166588 + Gm23143 snRNA snRNA MGP_129S1SvImJ_T0066619.1 MGP_129S1SvImJ_G0028512.1 mouse_genomes_project 4 105373016 105375102 + MGP_129S1SvImJ_P0066619 Gm17662 protein_coding protein_coding MGP_129S1SvImJ_T0014689.1 MGP_129S1SvImJ_G0012778.1 mouse_genomes_project 4 98510902 98511188 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014552.1 MGP_129S1SvImJ_G0012641.1 mouse_genomes_project 4 47105841 47106206 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011585.1 MGP_129S1SvImJ_G0009701.1 mouse_genomes_project 4 46000127 46000247 + Gm27668 misc_RNA misc_RNA MGP_129S1SvImJ_T0014858.1 MGP_129S1SvImJ_G0012947.1 mouse_genomes_project 4 159840249 159840640 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064807.1 MGP_129S1SvImJ_G0028083.1 mouse_genomes_project 4 16641618 16736244 - MGP_129S1SvImJ_P0064807 Wwp1 protein_coding protein_coding MGP_129S1SvImJ_T0064808.1 MGP_129S1SvImJ_G0028083.1 mouse_genomes_project 4 16642988 16707401 - MGP_129S1SvImJ_P0064808 Wwp1 protein_coding protein_coding MGP_129S1SvImJ_T0067168.1 MGP_129S1SvImJ_G0028626.1 mouse_genomes_project 4 117450319 117454643 - MGP_129S1SvImJ_P0067168 Tmem69 protein_coding protein_coding MGP_129S1SvImJ_T0067169.1 MGP_129S1SvImJ_G0028626.1 mouse_genomes_project 4 117450591 117451822 - Tmem69 protein_coding processed_transcript MGP_129S1SvImJ_T0067170.1 MGP_129S1SvImJ_G0028626.1 mouse_genomes_project 4 117451661 117454642 - MGP_129S1SvImJ_P0067170 Tmem69 protein_coding protein_coding MGP_129S1SvImJ_T0067830.1 MGP_129S1SvImJ_G0028786.1 mouse_genomes_project 4 128424104 128445702 - MGP_129S1SvImJ_P0067830 Tfap2e protein_coding protein_coding MGP_129S1SvImJ_T0068740.1 MGP_129S1SvImJ_G0028984.1 mouse_genomes_project 4 140218426 140220662 - MGP_129S1SvImJ_P0068740 Ldlrad2 protein_coding protein_coding MGP_129S1SvImJ_T0099850.1 MGP_129S1SvImJ_G0037917.1 mouse_genomes_project 4 101384187 101384250 - Gm22100 snRNA snRNA MGP_129S1SvImJ_T0068160.1 MGP_129S1SvImJ_G0028853.1 mouse_genomes_project 4 132688008 132820485 + MGP_129S1SvImJ_P0068160 Pum1 protein_coding protein_coding MGP_129S1SvImJ_T0068161.1 MGP_129S1SvImJ_G0028853.1 mouse_genomes_project 4 132688046 132820483 + MGP_129S1SvImJ_P0068161 Pum1 protein_coding protein_coding MGP_129S1SvImJ_T0068162.1 MGP_129S1SvImJ_G0028853.1 mouse_genomes_project 4 132688046 132820483 + MGP_129S1SvImJ_P0068162 Pum1 protein_coding protein_coding MGP_129S1SvImJ_T0068163.1 MGP_129S1SvImJ_G0028853.1 mouse_genomes_project 4 132688053 132749938 + Pum1 protein_coding retained_intron MGP_129S1SvImJ_T0068164.1 MGP_129S1SvImJ_G0028853.1 mouse_genomes_project 4 132688054 132778060 + MGP_129S1SvImJ_P0068164 Pum1 protein_coding protein_coding MGP_129S1SvImJ_T0068165.1 MGP_129S1SvImJ_G0028853.1 mouse_genomes_project 4 132688073 132819185 + MGP_129S1SvImJ_P0068165 Pum1 protein_coding protein_coding MGP_129S1SvImJ_T0068166.1 MGP_129S1SvImJ_G0028853.1 mouse_genomes_project 4 132688093 132819173 + MGP_129S1SvImJ_P0068166 Pum1 protein_coding protein_coding MGP_129S1SvImJ_T0014681.1 MGP_129S1SvImJ_G0012770.1 mouse_genomes_project 4 95089116 95089580 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067508.1 MGP_129S1SvImJ_G0028700.1 mouse_genomes_project 4 120663813 120691678 - MGP_129S1SvImJ_P0067508 Rimkla protein_coding protein_coding MGP_129S1SvImJ_T0067509.1 MGP_129S1SvImJ_G0028700.1 mouse_genomes_project 4 120673071 120691559 - Rimkla protein_coding processed_transcript MGP_129S1SvImJ_T0001432.1 MGP_129S1SvImJ_G0001355.1 mouse_genomes_project 4 46228242 46333936 - TEC TEC MGP_129S1SvImJ_T0069137.1 MGP_129S1SvImJ_G0029090.1 mouse_genomes_project 4 147751192 147769525 - MGP_129S1SvImJ_P0069137 Pramef12 protein_coding protein_coding MGP_129S1SvImJ_T0069138.1 MGP_129S1SvImJ_G0029090.1 mouse_genomes_project 4 147754553 147769478 - MGP_129S1SvImJ_P0069138 Pramef12 protein_coding protein_coding MGP_129S1SvImJ_T0014566.1 MGP_129S1SvImJ_G0012655.1 mouse_genomes_project 4 51026215 51026473 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018117.1 MGP_129S1SvImJ_G0015571.1 mouse_genomes_project 4 120120697 120165725 + processed_transcript processed_transcript MGP_129S1SvImJ_T0067595.1 MGP_129S1SvImJ_G0028724.1 mouse_genomes_project 4 122633665 122642491 - MGP_129S1SvImJ_P0067595 Gm12888 protein_coding protein_coding MGP_129S1SvImJ_T0067459.1 MGP_129S1SvImJ_G0028692.1 mouse_genomes_project 4 120389240 120402338 - MGP_129S1SvImJ_P0067459 4930538K18Rik protein_coding protein_coding MGP_129S1SvImJ_T0014853.1 MGP_129S1SvImJ_G0012942.1 mouse_genomes_project 4 154867897 154872230 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018091.1 MGP_129S1SvImJ_G0015552.1 mouse_genomes_project 4 77646714 77648950 + B230208B08Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0014418.1 MGP_129S1SvImJ_G0012507.1 mouse_genomes_project 4 7445712 7446898 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101169.1 MGP_129S1SvImJ_G0039236.1 mouse_genomes_project 4 136498682 136498770 - Gm27619 snoRNA snoRNA MGP_129S1SvImJ_T0007825.1 MGP_129S1SvImJ_G0006397.1 mouse_genomes_project 4 20358165 20491943 + Gm11884 lincRNA lincRNA MGP_129S1SvImJ_T0067635.1 MGP_129S1SvImJ_G0028738.1 mouse_genomes_project 4 124660678 124677027 + MGP_129S1SvImJ_P0067635 Heyl protein_coding protein_coding MGP_129S1SvImJ_T0067636.1 MGP_129S1SvImJ_G0028738.1 mouse_genomes_project 4 124660975 124667783 + Heyl protein_coding processed_transcript MGP_129S1SvImJ_T0067637.1 MGP_129S1SvImJ_G0028738.1 mouse_genomes_project 4 124666880 124673142 + Heyl protein_coding processed_transcript MGP_129S1SvImJ_T0014404.1 MGP_129S1SvImJ_G0012493.1 mouse_genomes_project 4 2369345 2370317 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068884.1 MGP_129S1SvImJ_G0029014.1 mouse_genomes_project 4 142119185 142136864 - MGP_129S1SvImJ_P0068884 Pqlc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068885.1 MGP_129S1SvImJ_G0029014.1 mouse_genomes_project 4 142123689 142136887 - MGP_129S1SvImJ_P0068885 Pqlc2 protein_coding protein_coding MGP_129S1SvImJ_T0068886.1 MGP_129S1SvImJ_G0029014.1 mouse_genomes_project 4 142123691 142136844 - MGP_129S1SvImJ_P0068886 Pqlc2 protein_coding protein_coding MGP_129S1SvImJ_T0068887.1 MGP_129S1SvImJ_G0029014.1 mouse_genomes_project 4 142123691 142136857 - MGP_129S1SvImJ_P0068887 Pqlc2 protein_coding protein_coding MGP_129S1SvImJ_T0068888.1 MGP_129S1SvImJ_G0029014.1 mouse_genomes_project 4 142126471 142136816 - MGP_129S1SvImJ_P0068888 Pqlc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0098595.1 MGP_129S1SvImJ_G0036680.1 mouse_genomes_project 4 126374063 126374182 + n-R5s192 rRNA rRNA MGP_129S1SvImJ_T0069141.1 MGP_129S1SvImJ_G0029093.1 mouse_genomes_project 4 147821683 147834375 - MGP_129S1SvImJ_P0069141 Aadacl3 protein_coding protein_coding MGP_129S1SvImJ_T0066353.1 MGP_129S1SvImJ_G0028457.1 mouse_genomes_project 4 95637649 96024684 + MGP_129S1SvImJ_P0066353 Fggy protein_coding protein_coding MGP_129S1SvImJ_T0066354.1 MGP_129S1SvImJ_G0028457.1 mouse_genomes_project 4 95637653 95932125 + Fggy protein_coding processed_transcript MGP_129S1SvImJ_T0066355.1 MGP_129S1SvImJ_G0028457.1 mouse_genomes_project 4 95637661 96024680 + Fggy protein_coding processed_transcript MGP_129S1SvImJ_T0066356.1 MGP_129S1SvImJ_G0028457.1 mouse_genomes_project 4 95637662 95676198 + MGP_129S1SvImJ_P0066356 Fggy protein_coding protein_coding MGP_129S1SvImJ_T0066357.1 MGP_129S1SvImJ_G0028457.1 mouse_genomes_project 4 95659453 95914085 + MGP_129S1SvImJ_P0066357 Fggy protein_coding protein_coding MGP_129S1SvImJ_T0066358.1 MGP_129S1SvImJ_G0028457.1 mouse_genomes_project 4 95659516 95679601 + Fggy protein_coding processed_transcript MGP_129S1SvImJ_T0066359.1 MGP_129S1SvImJ_G0028457.1 mouse_genomes_project 4 95659521 95676204 + MGP_129S1SvImJ_P0066359 Fggy protein_coding protein_coding MGP_129S1SvImJ_T0066360.1 MGP_129S1SvImJ_G0028457.1 mouse_genomes_project 4 95659526 95860192 + MGP_129S1SvImJ_P0066360 Fggy protein_coding protein_coding MGP_129S1SvImJ_T0066361.1 MGP_129S1SvImJ_G0028457.1 mouse_genomes_project 4 95665276 95903983 + MGP_129S1SvImJ_P0066361 Fggy protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066362.1 MGP_129S1SvImJ_G0028457.1 mouse_genomes_project 4 95665276 96024549 + MGP_129S1SvImJ_P0066362 Fggy protein_coding protein_coding MGP_129S1SvImJ_T0066363.1 MGP_129S1SvImJ_G0028457.1 mouse_genomes_project 4 95666947 95828523 + Fggy protein_coding processed_transcript MGP_129S1SvImJ_T0066364.1 MGP_129S1SvImJ_G0028457.1 mouse_genomes_project 4 95706752 95973697 + Fggy protein_coding processed_transcript MGP_129S1SvImJ_T0066365.1 MGP_129S1SvImJ_G0028457.1 mouse_genomes_project 4 95706759 95828580 + MGP_129S1SvImJ_P0066365 Fggy protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066366.1 MGP_129S1SvImJ_G0028457.1 mouse_genomes_project 4 95720090 95914498 + Fggy protein_coding processed_transcript MGP_129S1SvImJ_T0066367.1 MGP_129S1SvImJ_G0028457.1 mouse_genomes_project 4 95828065 95860201 + Fggy protein_coding processed_transcript MGP_129S1SvImJ_T0066368.1 MGP_129S1SvImJ_G0028457.1 mouse_genomes_project 4 95860264 96024684 + MGP_129S1SvImJ_P0066368 Fggy protein_coding protein_coding MGP_129S1SvImJ_T0066369.1 MGP_129S1SvImJ_G0028457.1 mouse_genomes_project 4 95914493 96024549 + MGP_129S1SvImJ_P0066369 Fggy protein_coding protein_coding MGP_129S1SvImJ_T0066370.1 MGP_129S1SvImJ_G0028457.1 mouse_genomes_project 4 95941091 96024679 + MGP_129S1SvImJ_P0066370 Fggy protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068202.1 MGP_129S1SvImJ_G0028859.1 mouse_genomes_project 4 133987982 134015906 + MGP_129S1SvImJ_P0068202 Srsf4 protein_coding protein_coding MGP_129S1SvImJ_T0068203.1 MGP_129S1SvImJ_G0028859.1 mouse_genomes_project 4 133988181 134006509 + MGP_129S1SvImJ_P0068203 Srsf4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068204.1 MGP_129S1SvImJ_G0028859.1 mouse_genomes_project 4 133998667 134012029 + MGP_129S1SvImJ_P0068204 Srsf4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068205.1 MGP_129S1SvImJ_G0028859.1 mouse_genomes_project 4 133999318 134015272 + MGP_129S1SvImJ_P0068205 Srsf4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0068206.1 MGP_129S1SvImJ_G0028859.1 mouse_genomes_project 4 133999580 134015906 + Srsf4 protein_coding retained_intron MGP_129S1SvImJ_T0014717.1 MGP_129S1SvImJ_G0012806.1 mouse_genomes_project 4 106858182 106858447 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004572.1 MGP_129S1SvImJ_G0003974.1 mouse_genomes_project 4 138502365 138511059 + Gm13008 antisense antisense MGP_129S1SvImJ_T0001437.1 MGP_129S1SvImJ_G0001360.1 mouse_genomes_project 4 109374463 109376751 - TEC TEC MGP_129S1SvImJ_T0065633.1 MGP_129S1SvImJ_G0028265.1 mouse_genomes_project 4 45460329 45489561 + MGP_129S1SvImJ_P0065633 Galnt12 protein_coding protein_coding MGP_129S1SvImJ_T0067475.1 MGP_129S1SvImJ_G0028694.1 mouse_genomes_project 4 120439423 120443973 + MGP_129S1SvImJ_P0067475 Cldn19 protein_coding protein_coding MGP_129S1SvImJ_T0067476.1 MGP_129S1SvImJ_G0028694.1 mouse_genomes_project 4 120439518 120446544 + MGP_129S1SvImJ_P0067476 Cldn19 protein_coding protein_coding MGP_129S1SvImJ_T0004591.1 MGP_129S1SvImJ_G0003989.1 mouse_genomes_project 4 144949850 144952512 + Ctrcos antisense antisense MGP_129S1SvImJ_T0007906.1 MGP_129S1SvImJ_G0006467.1 mouse_genomes_project 4 95143423 95145762 - 4930551L18Rik lincRNA lincRNA MGP_129S1SvImJ_T0068418.1 MGP_129S1SvImJ_G0028907.1 mouse_genomes_project 4 136281090 136314841 - MGP_129S1SvImJ_P0068418 Dhdds protein_coding protein_coding MGP_129S1SvImJ_T0068419.1 MGP_129S1SvImJ_G0028907.1 mouse_genomes_project 4 136281119 136314838 - MGP_129S1SvImJ_P0068419 Dhdds protein_coding protein_coding MGP_129S1SvImJ_T0068420.1 MGP_129S1SvImJ_G0028907.1 mouse_genomes_project 4 136281120 136292821 - Dhdds protein_coding processed_transcript MGP_129S1SvImJ_T0068421.1 MGP_129S1SvImJ_G0028907.1 mouse_genomes_project 4 136281125 136314344 - Dhdds protein_coding processed_transcript MGP_129S1SvImJ_T0068422.1 MGP_129S1SvImJ_G0028907.1 mouse_genomes_project 4 136281237 136314822 - Dhdds protein_coding processed_transcript MGP_129S1SvImJ_T0068423.1 MGP_129S1SvImJ_G0028907.1 mouse_genomes_project 4 136282254 136314822 - MGP_129S1SvImJ_P0068423 Dhdds protein_coding protein_coding MGP_129S1SvImJ_T0068424.1 MGP_129S1SvImJ_G0028907.1 mouse_genomes_project 4 136282982 136308334 - MGP_129S1SvImJ_P0068424 Dhdds protein_coding protein_coding MGP_129S1SvImJ_T0068425.1 MGP_129S1SvImJ_G0028907.1 mouse_genomes_project 4 136283010 136314344 - MGP_129S1SvImJ_P0068425 Dhdds protein_coding protein_coding MGP_129S1SvImJ_T0068426.1 MGP_129S1SvImJ_G0028907.1 mouse_genomes_project 4 136283042 136314344 - MGP_129S1SvImJ_P0068426 Dhdds protein_coding protein_coding MGP_129S1SvImJ_T0068427.1 MGP_129S1SvImJ_G0028907.1 mouse_genomes_project 4 136283304 136314869 - MGP_129S1SvImJ_P0068427 Dhdds protein_coding protein_coding MGP_129S1SvImJ_T0068428.1 MGP_129S1SvImJ_G0028907.1 mouse_genomes_project 4 136292403 136311077 - Dhdds protein_coding processed_transcript MGP_129S1SvImJ_T0102531.1 MGP_129S1SvImJ_G0040364.1 mouse_genomes_project 4 102222415 102222688 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0065239.1 MGP_129S1SvImJ_G0028195.1 mouse_genomes_project 4 41044146 41046805 + 1700022I11Rik protein_coding processed_transcript MGP_129S1SvImJ_T0065240.1 MGP_129S1SvImJ_G0028195.1 mouse_genomes_project 4 41044173 41046771 + MGP_129S1SvImJ_P0065240 1700022I11Rik protein_coding protein_coding MGP_129S1SvImJ_T0065241.1 MGP_129S1SvImJ_G0028195.1 mouse_genomes_project 4 41044474 41046961 + MGP_129S1SvImJ_P0065241 1700022I11Rik protein_coding protein_coding MGP_129S1SvImJ_T0065242.1 MGP_129S1SvImJ_G0028195.1 mouse_genomes_project 4 41044486 41049799 + MGP_129S1SvImJ_P0065242 1700022I11Rik protein_coding protein_coding MGP_129S1SvImJ_T0065243.1 MGP_129S1SvImJ_G0028195.1 mouse_genomes_project 4 41044486 41062022 + MGP_129S1SvImJ_P0065243 1700022I11Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0014516.1 MGP_129S1SvImJ_G0012605.1 mouse_genomes_project 4 32546572 32546914 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010601.1 MGP_129S1SvImJ_G0008717.1 mouse_genomes_project 4 38756521 38756604 - Gm25931 miRNA miRNA MGP_129S1SvImJ_T0068263.1 MGP_129S1SvImJ_G0028870.1 mouse_genomes_project 4 134502419 134575985 - MGP_129S1SvImJ_P0068263 Phactr4 protein_coding protein_coding MGP_129S1SvImJ_T0068264.1 MGP_129S1SvImJ_G0028870.1 mouse_genomes_project 4 134502426 134575942 - MGP_129S1SvImJ_P0068264 Phactr4 protein_coding protein_coding MGP_129S1SvImJ_T0068265.1 MGP_129S1SvImJ_G0028870.1 mouse_genomes_project 4 134504747 134550955 - MGP_129S1SvImJ_P0068265 Phactr4 protein_coding protein_coding MGP_129S1SvImJ_T0068266.1 MGP_129S1SvImJ_G0028870.1 mouse_genomes_project 4 134507174 134516900 - Phactr4 protein_coding processed_transcript MGP_129S1SvImJ_T0068267.1 MGP_129S1SvImJ_G0028870.1 mouse_genomes_project 4 134517319 134575937 - MGP_129S1SvImJ_P0068267 Phactr4 protein_coding protein_coding MGP_129S1SvImJ_T0068268.1 MGP_129S1SvImJ_G0028870.1 mouse_genomes_project 4 134525228 134550943 - MGP_129S1SvImJ_P0068268 Phactr4 protein_coding protein_coding MGP_129S1SvImJ_T0068320.1 MGP_129S1SvImJ_G0028884.1 mouse_genomes_project 4 135182146 135197932 + Fgr protein_coding processed_transcript MGP_129S1SvImJ_T0068321.1 MGP_129S1SvImJ_G0028884.1 mouse_genomes_project 4 135182153 135215364 + MGP_129S1SvImJ_P0068321 Fgr protein_coding protein_coding MGP_129S1SvImJ_T0068322.1 MGP_129S1SvImJ_G0028884.1 mouse_genomes_project 4 135185167 135214206 + Fgr protein_coding processed_transcript MGP_129S1SvImJ_T0064960.1 MGP_129S1SvImJ_G0028120.1 mouse_genomes_project 4 30679256 30696099 - MGP_129S1SvImJ_P0064960 Pm20d2 protein_coding protein_coding MGP_129S1SvImJ_T0064961.1 MGP_129S1SvImJ_G0028120.1 mouse_genomes_project 4 30688293 30696403 - MGP_129S1SvImJ_P0064961 Pm20d2 protein_coding protein_coding MGP_129S1SvImJ_T0066392.1 MGP_129S1SvImJ_G0028465.1 mouse_genomes_project 4 96667392 96691846 - MGP_129S1SvImJ_P0066392 Cyp2j9 protein_coding protein_coding MGP_129S1SvImJ_T0066393.1 MGP_129S1SvImJ_G0028465.1 mouse_genomes_project 4 96676569 96691846 - Cyp2j9 protein_coding retained_intron MGP_129S1SvImJ_T0014473.1 MGP_129S1SvImJ_G0012562.1 mouse_genomes_project 4 22457489 22458317 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064760.1 MGP_129S1SvImJ_G0028065.1 mouse_genomes_project 4 10500325 10658783 + MGP_129S1SvImJ_P0064760 Runx1t1 protein_coding protein_coding MGP_129S1SvImJ_T0064761.1 MGP_129S1SvImJ_G0028065.1 mouse_genomes_project 4 10508187 10607115 + Runx1t1 protein_coding processed_transcript MGP_129S1SvImJ_T0064762.1 MGP_129S1SvImJ_G0028065.1 mouse_genomes_project 4 10508187 10658762 + MGP_129S1SvImJ_P0064762 Runx1t1 protein_coding protein_coding MGP_129S1SvImJ_T0064763.1 MGP_129S1SvImJ_G0028065.1 mouse_genomes_project 4 10530641 10655452 + MGP_129S1SvImJ_P0064763 Runx1t1 protein_coding protein_coding MGP_129S1SvImJ_T0064764.1 MGP_129S1SvImJ_G0028065.1 mouse_genomes_project 4 10544060 10656245 + MGP_129S1SvImJ_P0064764 Runx1t1 protein_coding protein_coding MGP_129S1SvImJ_T0064765.1 MGP_129S1SvImJ_G0028065.1 mouse_genomes_project 4 10654348 10655091 + Runx1t1 protein_coding processed_transcript MGP_129S1SvImJ_T0008020.1 MGP_129S1SvImJ_G0006546.1 mouse_genomes_project 4 143301066 143306011 + Gm13016 lincRNA lincRNA MGP_129S1SvImJ_T0008030.1 MGP_129S1SvImJ_G0006556.1 mouse_genomes_project 4 152014300 152023894 + Gm13206 lincRNA lincRNA MGP_129S1SvImJ_T0004475.1 MGP_129S1SvImJ_G0003901.1 mouse_genomes_project 4 51868565 51873485 + 4930522O17Rik antisense antisense MGP_129S1SvImJ_T0067403.1 MGP_129S1SvImJ_G0028669.1 mouse_genomes_project 4 119503730 119519934 - MGP_129S1SvImJ_P0067403 Mpl protein_coding protein_coding MGP_129S1SvImJ_T0067404.1 MGP_129S1SvImJ_G0028669.1 mouse_genomes_project 4 119503732 119519916 - MGP_129S1SvImJ_P0067404 Mpl protein_coding protein_coding MGP_129S1SvImJ_T0067405.1 MGP_129S1SvImJ_G0028669.1 mouse_genomes_project 4 119504587 119519878 - MGP_129S1SvImJ_P0067405 Mpl protein_coding protein_coding MGP_129S1SvImJ_T0067406.1 MGP_129S1SvImJ_G0028669.1 mouse_genomes_project 4 119504744 119519871 - MGP_129S1SvImJ_P0067406 Mpl protein_coding protein_coding MGP_129S1SvImJ_T0065648.1 MGP_129S1SvImJ_G0028268.1 mouse_genomes_project 4 45847784 45854670 - Alg2 protein_coding processed_transcript MGP_129S1SvImJ_T0065649.1 MGP_129S1SvImJ_G0028268.1 mouse_genomes_project 4 45853732 45858220 - MGP_129S1SvImJ_P0065649 Alg2 protein_coding protein_coding MGP_129S1SvImJ_T0065650.1 MGP_129S1SvImJ_G0028268.1 mouse_genomes_project 4 45855792 45857864 - MGP_129S1SvImJ_P0065650 Alg2 protein_coding protein_coding MGP_129S1SvImJ_T0069091.1 MGP_129S1SvImJ_G0029063.1 mouse_genomes_project 4 145159452 145217062 - MGP_129S1SvImJ_P0069091 Tmem51 protein_coding protein_coding MGP_129S1SvImJ_T0068846.1 MGP_129S1SvImJ_G0029004.1 mouse_genomes_project 4 141585203 141605078 - MGP_129S1SvImJ_P0068846 Pla2g5 protein_coding protein_coding MGP_129S1SvImJ_T0068847.1 MGP_129S1SvImJ_G0029004.1 mouse_genomes_project 4 141585203 141605072 - MGP_129S1SvImJ_P0068847 Pla2g5 protein_coding protein_coding MGP_129S1SvImJ_T0068848.1 MGP_129S1SvImJ_G0029004.1 mouse_genomes_project 4 141585208 141655884 - MGP_129S1SvImJ_P0068848 Pla2g5 protein_coding protein_coding MGP_129S1SvImJ_T0068849.1 MGP_129S1SvImJ_G0029004.1 mouse_genomes_project 4 141586312 141597982 - MGP_129S1SvImJ_P0068849 Pla2g5 protein_coding protein_coding MGP_129S1SvImJ_T0068850.1 MGP_129S1SvImJ_G0029004.1 mouse_genomes_project 4 141586529 141598028 - Pla2g5 protein_coding processed_transcript MGP_129S1SvImJ_T0068851.1 MGP_129S1SvImJ_G0029004.1 mouse_genomes_project 4 141590524 141605074 - Pla2g5 protein_coding processed_transcript MGP_129S1SvImJ_T0068852.1 MGP_129S1SvImJ_G0029004.1 mouse_genomes_project 4 141590538 141605045 - Pla2g5 protein_coding processed_transcript MGP_129S1SvImJ_T0068853.1 MGP_129S1SvImJ_G0029004.1 mouse_genomes_project 4 141592144 141595602 - Pla2g5 protein_coding processed_transcript MGP_129S1SvImJ_T0068854.1 MGP_129S1SvImJ_G0029004.1 mouse_genomes_project 4 141649153 141655864 - Pla2g5 protein_coding processed_transcript MGP_129S1SvImJ_T0014510.1 MGP_129S1SvImJ_G0012599.1 mouse_genomes_project 4 30974404 30974803 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014830.1 MGP_129S1SvImJ_G0012919.1 mouse_genomes_project 4 145100893 145101458 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065698.1 MGP_129S1SvImJ_G0028282.1 mouse_genomes_project 4 47994623 48003126 - MGP_129S1SvImJ_P0065698 Mrpl50 protein_coding protein_coding MGP_129S1SvImJ_T0069487.1 MGP_129S1SvImJ_G0029166.1 mouse_genomes_project 4 156080793 156087366 - MGP_129S1SvImJ_P0069487 Phf13 protein_coding protein_coding MGP_129S1SvImJ_T0102517.1 MGP_129S1SvImJ_G0040351.1 mouse_genomes_project 4 51540766 51541718 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0067979.1 MGP_129S1SvImJ_G0028818.1 mouse_genomes_project 4 131181997 131205859 + MGP_129S1SvImJ_P0067979 Sync protein_coding protein_coding MGP_129S1SvImJ_T0067980.1 MGP_129S1SvImJ_G0028818.1 mouse_genomes_project 4 131182011 131204662 + Sync protein_coding retained_intron MGP_129S1SvImJ_T0014528.1 MGP_129S1SvImJ_G0012617.1 mouse_genomes_project 4 37663509 37664428 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018133.1 MGP_129S1SvImJ_G0015578.1 mouse_genomes_project 4 134013677 134035165 - Gm12992 processed_transcript processed_transcript MGP_129S1SvImJ_T0018134.1 MGP_129S1SvImJ_G0015578.1 mouse_genomes_project 4 134027559 134030655 - Gm12992 processed_transcript processed_transcript MGP_129S1SvImJ_T0014586.1 MGP_129S1SvImJ_G0012675.1 mouse_genomes_project 4 56207820 56208932 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068844.1 MGP_129S1SvImJ_G0029003.1 mouse_genomes_project 4 141560534 141568075 + MGP_129S1SvImJ_P0068844 Pla2g2d protein_coding protein_coding MGP_129S1SvImJ_T0068845.1 MGP_129S1SvImJ_G0029003.1 mouse_genomes_project 4 141562693 141565925 + MGP_129S1SvImJ_P0068845 Pla2g2d protein_coding protein_coding MGP_129S1SvImJ_T0014628.1 MGP_129S1SvImJ_G0012717.1 mouse_genomes_project 4 74652577 74653292 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068004.1 MGP_129S1SvImJ_G0028825.1 mouse_genomes_project 4 131414538 131415305 + MGP_129S1SvImJ_P0068004 Fam229a protein_coding protein_coding MGP_129S1SvImJ_T0068005.1 MGP_129S1SvImJ_G0028825.1 mouse_genomes_project 4 131414588 131415305 + Fam229a protein_coding retained_intron MGP_129S1SvImJ_T0014730.1 MGP_129S1SvImJ_G0012819.1 mouse_genomes_project 4 110401597 110402741 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066297.1 MGP_129S1SvImJ_G0028439.1 mouse_genomes_project 4 88785521 88786185 - MGP_129S1SvImJ_P0066297 Ifne protein_coding protein_coding MGP_129S1SvImJ_T0067477.1 MGP_129S1SvImJ_G0028695.1 mouse_genomes_project 4 120465574 120483438 - MGP_129S1SvImJ_P0067477 Ybx1 protein_coding protein_coding MGP_129S1SvImJ_T0067478.1 MGP_129S1SvImJ_G0028695.1 mouse_genomes_project 4 120465583 120471807 - MGP_129S1SvImJ_P0067478 Ybx1 protein_coding protein_coding MGP_129S1SvImJ_T0067479.1 MGP_129S1SvImJ_G0028695.1 mouse_genomes_project 4 120465760 120467044 - Ybx1 protein_coding processed_transcript MGP_129S1SvImJ_T0067480.1 MGP_129S1SvImJ_G0028695.1 mouse_genomes_project 4 120470157 120471201 - Ybx1 protein_coding processed_transcript MGP_129S1SvImJ_T0067481.1 MGP_129S1SvImJ_G0028695.1 mouse_genomes_project 4 120471287 120483324 - Ybx1 protein_coding processed_transcript MGP_129S1SvImJ_T0067482.1 MGP_129S1SvImJ_G0028695.1 mouse_genomes_project 4 120482569 120483334 - Ybx1 protein_coding processed_transcript MGP_129S1SvImJ_T0101105.1 MGP_129S1SvImJ_G0039172.1 mouse_genomes_project 4 39145708 39145786 - Gm23090 snoRNA snoRNA MGP_129S1SvImJ_T0068668.1 MGP_129S1SvImJ_G0028960.1 mouse_genomes_project 4 138666910 138668807 + MGP_129S1SvImJ_P0068668 Id3 protein_coding protein_coding MGP_129S1SvImJ_T0068669.1 MGP_129S1SvImJ_G0028960.1 mouse_genomes_project 4 138667278 138668131 + Id3 protein_coding retained_intron MGP_129S1SvImJ_T0068670.1 MGP_129S1SvImJ_G0028960.1 mouse_genomes_project 4 138668388 138669170 + Id3 protein_coding processed_transcript MGP_129S1SvImJ_T0066076.1 MGP_129S1SvImJ_G0028390.1 mouse_genomes_project 4 73518539 73689788 + MGP_129S1SvImJ_P0066076 Kdm4c protein_coding protein_coding MGP_129S1SvImJ_T0066077.1 MGP_129S1SvImJ_G0028390.1 mouse_genomes_project 4 73529404 73689788 + MGP_129S1SvImJ_P0066077 Kdm4c protein_coding protein_coding MGP_129S1SvImJ_T0066078.1 MGP_129S1SvImJ_G0028390.1 mouse_genomes_project 4 73540238 73613045 + Kdm4c protein_coding processed_transcript MGP_129S1SvImJ_T0066079.1 MGP_129S1SvImJ_G0028390.1 mouse_genomes_project 4 73540238 73619142 + MGP_129S1SvImJ_P0066079 Kdm4c protein_coding protein_coding MGP_129S1SvImJ_T0066080.1 MGP_129S1SvImJ_G0028390.1 mouse_genomes_project 4 73540239 73552145 + Kdm4c protein_coding processed_transcript MGP_129S1SvImJ_T0066081.1 MGP_129S1SvImJ_G0028390.1 mouse_genomes_project 4 73540239 73548180 + Kdm4c protein_coding processed_transcript MGP_129S1SvImJ_T0064725.1 MGP_129S1SvImJ_G0028055.1 mouse_genomes_project 4 8253321 8262061 + MGP_129S1SvImJ_P0064725 Fsbp protein_coding protein_coding MGP_129S1SvImJ_T0102544.1 MGP_129S1SvImJ_G0040377.1 mouse_genomes_project 4 124033133 124041102 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0004441.1 MGP_129S1SvImJ_G0003874.1 mouse_genomes_project 4 8286760 8290629 - Gm11832 antisense antisense MGP_129S1SvImJ_T0067916.1 MGP_129S1SvImJ_G0028807.1 mouse_genomes_project 4 130601997 130637689 - MGP_129S1SvImJ_P0067916 Zfp362 protein_coding protein_coding MGP_129S1SvImJ_T0067917.1 MGP_129S1SvImJ_G0028807.1 mouse_genomes_project 4 130602013 130624844 - MGP_129S1SvImJ_P0067917 Zfp362 protein_coding protein_coding MGP_129S1SvImJ_T0067918.1 MGP_129S1SvImJ_G0028807.1 mouse_genomes_project 4 130605993 130637689 - MGP_129S1SvImJ_P0067918 Zfp362 protein_coding protein_coding MGP_129S1SvImJ_T0067919.1 MGP_129S1SvImJ_G0028807.1 mouse_genomes_project 4 130618230 130619002 - Zfp362 protein_coding processed_transcript MGP_129S1SvImJ_T0014677.1 MGP_129S1SvImJ_G0012766.1 mouse_genomes_project 4 93627224 93627534 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007824.1 MGP_129S1SvImJ_G0006396.1 mouse_genomes_project 4 19994855 20006019 - 1700025O08Rik lincRNA lincRNA MGP_129S1SvImJ_T0069073.1 MGP_129S1SvImJ_G0029059.1 mouse_genomes_project 4 144919306 144923551 - Cela2a protein_coding retained_intron MGP_129S1SvImJ_T0069074.1 MGP_129S1SvImJ_G0029059.1 mouse_genomes_project 4 144919306 144930509 - MGP_129S1SvImJ_P0069074 Cela2a protein_coding protein_coding MGP_129S1SvImJ_T0069076.1 MGP_129S1SvImJ_G0029059.1 mouse_genomes_project 4 144929300 144930350 - Cela2a protein_coding retained_intron MGP_129S1SvImJ_T0065101.1 MGP_129S1SvImJ_G0028155.1 mouse_genomes_project 4 39037697 39050225 - MGP_129S1SvImJ_P0065101 Nol6 protein_coding protein_coding MGP_129S1SvImJ_T0065102.1 MGP_129S1SvImJ_G0028155.1 mouse_genomes_project 4 39044601 39046570 - Nol6 protein_coding processed_transcript MGP_129S1SvImJ_T0065103.1 MGP_129S1SvImJ_G0028155.1 mouse_genomes_project 4 39044817 39046805 - Nol6 protein_coding processed_transcript MGP_129S1SvImJ_T0065104.1 MGP_129S1SvImJ_G0028155.1 mouse_genomes_project 4 39045149 39046025 - Nol6 protein_coding processed_transcript MGP_129S1SvImJ_T0018115.1 MGP_129S1SvImJ_G0015569.1 mouse_genomes_project 4 117492778 117501533 - C530005A16Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0064865.1 MGP_129S1SvImJ_G0028097.1 mouse_genomes_project 4 19551607 19557157 - MGP_129S1SvImJ_P0064865 Pou3f2 protein_coding protein_coding MGP_129S1SvImJ_T0014523.1 MGP_129S1SvImJ_G0012612.1 mouse_genomes_project 4 35794353 35794782 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014647.1 MGP_129S1SvImJ_G0012736.1 mouse_genomes_project 4 82702581 82702782 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064804.1 MGP_129S1SvImJ_G0028081.1 mouse_genomes_project 4 16601941 16631990 + MGP_129S1SvImJ_P0064804 Rmdn1 protein_coding protein_coding MGP_129S1SvImJ_T0064805.1 MGP_129S1SvImJ_G0028081.1 mouse_genomes_project 4 16601986 16640248 + MGP_129S1SvImJ_P0064805 Rmdn1 protein_coding protein_coding MGP_129S1SvImJ_T0004584.1 MGP_129S1SvImJ_G0003984.1 mouse_genomes_project 4 143936378 143946617 - Gm13031 antisense antisense MGP_129S1SvImJ_T0068736.1 MGP_129S1SvImJ_G0028982.1 mouse_genomes_project 4 140087059 140089211 + MGP_129S1SvImJ_P0068736 1700013G24Rik protein_coding protein_coding MGP_129S1SvImJ_T0066017.1 MGP_129S1SvImJ_G0028369.1 mouse_genomes_project 4 62560823 62568231 + MGP_129S1SvImJ_P0066017 Atp6v1g1 protein_coding protein_coding MGP_129S1SvImJ_T0007886.1 MGP_129S1SvImJ_G0006451.1 mouse_genomes_project 4 81577607 81604432 - Gm11264 lincRNA lincRNA MGP_129S1SvImJ_T0007852.1 MGP_129S1SvImJ_G0006423.1 mouse_genomes_project 4 50553898 50637571 - C630028M04Rik lincRNA lincRNA MGP_129S1SvImJ_T0014525.1 MGP_129S1SvImJ_G0012614.1 mouse_genomes_project 4 36507299 36508235 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007940.1 MGP_129S1SvImJ_G0006492.1 mouse_genomes_project 4 115432332 115439114 + Gm12829 lincRNA lincRNA MGP_129S1SvImJ_T0067410.1 MGP_129S1SvImJ_G0028671.1 mouse_genomes_project 4 119586256 119589114 + MGP_129S1SvImJ_P0067410 2610528J11Rik protein_coding protein_coding MGP_129S1SvImJ_T0067411.1 MGP_129S1SvImJ_G0028671.1 mouse_genomes_project 4 119586500 119589487 + MGP_129S1SvImJ_P0067411 2610528J11Rik protein_coding protein_coding MGP_129S1SvImJ_T0065207.1 MGP_129S1SvImJ_G0028185.1 mouse_genomes_project 4 40648260 40649380 + MGP_129S1SvImJ_P0065207 protein_coding protein_coding MGP_129S1SvImJ_T0010639.1 MGP_129S1SvImJ_G0008755.1 mouse_genomes_project 4 126289967 126290076 + Mir698 miRNA miRNA MGP_129S1SvImJ_T0068351.1 MGP_129S1SvImJ_G0028890.1 mouse_genomes_project 4 135487651 135498984 - MGP_129S1SvImJ_P0068351 Sytl1 protein_coding protein_coding MGP_129S1SvImJ_T0068352.1 MGP_129S1SvImJ_G0028890.1 mouse_genomes_project 4 135487651 135498958 - MGP_129S1SvImJ_P0068352 Sytl1 protein_coding protein_coding MGP_129S1SvImJ_T0068353.1 MGP_129S1SvImJ_G0028890.1 mouse_genomes_project 4 135487659 135498958 - Sytl1 protein_coding processed_transcript MGP_129S1SvImJ_T0068354.1 MGP_129S1SvImJ_G0028890.1 mouse_genomes_project 4 135487722 135498923 - Sytl1 protein_coding processed_transcript MGP_129S1SvImJ_T0014398.1 MGP_129S1SvImJ_G0012487.1 mouse_genomes_project 4 194261 194861 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069694.1 MGP_129S1SvImJ_G0029203.1 mouse_genomes_project 4 159247867 159249316 + MGP_129S1SvImJ_P0069694 Hes5 protein_coding protein_coding MGP_129S1SvImJ_T0069695.1 MGP_129S1SvImJ_G0029203.1 mouse_genomes_project 4 159247915 159248351 + Hes5 protein_coding processed_transcript MGP_129S1SvImJ_T0066483.1 MGP_129S1SvImJ_G0028484.1 mouse_genomes_project 4 100096566 100098929 + MGP_129S1SvImJ_P0066483 Efcab7 protein_coding protein_coding MGP_129S1SvImJ_T0066484.1 MGP_129S1SvImJ_G0028484.1 mouse_genomes_project 4 100096808 100098929 + MGP_129S1SvImJ_P0066484 Efcab7 protein_coding protein_coding MGP_129S1SvImJ_T0066485.1 MGP_129S1SvImJ_G0028484.1 mouse_genomes_project 4 100096868 100098929 + MGP_129S1SvImJ_P0066485 Efcab7 protein_coding protein_coding MGP_129S1SvImJ_T0066486.1 MGP_129S1SvImJ_G0028484.1 mouse_genomes_project 4 100098742 100153627 + MGP_129S1SvImJ_P0066486 Efcab7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0066487.1 MGP_129S1SvImJ_G0028484.1 mouse_genomes_project 4 100098742 100153627 + MGP_129S1SvImJ_P0066487 Efcab7 protein_coding protein_coding MGP_129S1SvImJ_T0066488.1 MGP_129S1SvImJ_G0028484.1 mouse_genomes_project 4 100150596 100153805 + MGP_129S1SvImJ_P0066488 Efcab7 protein_coding protein_coding MGP_129S1SvImJ_T0001454.1 MGP_129S1SvImJ_G0001375.1 mouse_genomes_project 4 160388344 160392458 - TEC TEC MGP_129S1SvImJ_T0102523.1 MGP_129S1SvImJ_G0040356.1 mouse_genomes_project 4 88515764 88516331 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0004632.1 MGP_129S1SvImJ_G0004020.1 mouse_genomes_project 4 159666304 159667087 + Gm27200 antisense antisense MGP_129S1SvImJ_T0004479.1 MGP_129S1SvImJ_G0003905.1 mouse_genomes_project 4 61051048 61053483 + Gm12909 antisense antisense MGP_129S1SvImJ_T0068693.1 MGP_129S1SvImJ_G0028966.1 mouse_genomes_project 4 138988915 139013141 + MGP_129S1SvImJ_P0068693 Htr1d protein_coding protein_coding MGP_129S1SvImJ_T0068694.1 MGP_129S1SvImJ_G0028966.1 mouse_genomes_project 4 138988917 139012507 + MGP_129S1SvImJ_P0068694 Htr1d protein_coding protein_coding MGP_129S1SvImJ_T0068695.1 MGP_129S1SvImJ_G0028966.1 mouse_genomes_project 4 138988921 139012507 + MGP_129S1SvImJ_P0068695 Htr1d protein_coding protein_coding MGP_129S1SvImJ_T0068696.1 MGP_129S1SvImJ_G0028966.1 mouse_genomes_project 4 138989956 139010713 + Htr1d protein_coding processed_transcript MGP_129S1SvImJ_T0069294.1 MGP_129S1SvImJ_G0029131.1 mouse_genomes_project 4 152574410 152726663 + MGP_129S1SvImJ_P0069294 Casz1 protein_coding protein_coding MGP_129S1SvImJ_T0069295.1 MGP_129S1SvImJ_G0029131.1 mouse_genomes_project 4 152574410 152736394 + MGP_129S1SvImJ_P0069295 Casz1 protein_coding protein_coding MGP_129S1SvImJ_T0069296.1 MGP_129S1SvImJ_G0029131.1 mouse_genomes_project 4 152574446 152613399 + Casz1 protein_coding processed_transcript MGP_129S1SvImJ_T0069297.1 MGP_129S1SvImJ_G0029131.1 mouse_genomes_project 4 152668302 152670861 + Casz1 protein_coding processed_transcript MGP_129S1SvImJ_T0069298.1 MGP_129S1SvImJ_G0029131.1 mouse_genomes_project 4 152680030 152712856 + MGP_129S1SvImJ_P0069298 Casz1 protein_coding protein_coding MGP_129S1SvImJ_T0069299.1 MGP_129S1SvImJ_G0029131.1 mouse_genomes_project 4 152713073 152720469 + MGP_129S1SvImJ_P0069299 Casz1 protein_coding protein_coding MGP_129S1SvImJ_T0064855.1 MGP_129S1SvImJ_G0028095.1 mouse_genomes_project 4 18970753 19039636 + Faxc protein_coding processed_transcript MGP_129S1SvImJ_T0064856.1 MGP_129S1SvImJ_G0028095.1 mouse_genomes_project 4 18970755 19040241 + MGP_129S1SvImJ_P0064856 Faxc protein_coding protein_coding MGP_129S1SvImJ_T0064857.1 MGP_129S1SvImJ_G0028095.1 mouse_genomes_project 4 18970757 18990085 + Faxc protein_coding processed_transcript MGP_129S1SvImJ_T0064858.1 MGP_129S1SvImJ_G0028095.1 mouse_genomes_project 4 18970781 19042328 + Faxc protein_coding processed_transcript MGP_129S1SvImJ_T0064859.1 MGP_129S1SvImJ_G0028095.1 mouse_genomes_project 4 18998705 19001057 + Faxc protein_coding processed_transcript MGP_129S1SvImJ_T0004530.1 MGP_129S1SvImJ_G0003940.1 mouse_genomes_project 4 117951437 117952284 - 1700021J08Rik antisense antisense MGP_129S1SvImJ_T0067079.1 MGP_129S1SvImJ_G0028610.1 mouse_genomes_project 4 116682689 116723538 + Mknk1 protein_coding processed_transcript MGP_129S1SvImJ_T0067080.1 MGP_129S1SvImJ_G0028610.1 mouse_genomes_project 4 116682689 116723538 + MGP_129S1SvImJ_P0067080 Mknk1 protein_coding protein_coding MGP_129S1SvImJ_T0067081.1 MGP_129S1SvImJ_G0028610.1 mouse_genomes_project 4 116682712 116708074 + MGP_129S1SvImJ_P0067081 Mknk1 protein_coding protein_coding MGP_129S1SvImJ_T0067082.1 MGP_129S1SvImJ_G0028610.1 mouse_genomes_project 4 116682714 116718158 + Mknk1 protein_coding processed_transcript MGP_129S1SvImJ_T0067083.1 MGP_129S1SvImJ_G0028610.1 mouse_genomes_project 4 116682724 116692069 + Mknk1 protein_coding processed_transcript MGP_129S1SvImJ_T0067084.1 MGP_129S1SvImJ_G0028610.1 mouse_genomes_project 4 116682724 116723538 + MGP_129S1SvImJ_P0067084 Mknk1 protein_coding protein_coding MGP_129S1SvImJ_T0067085.1 MGP_129S1SvImJ_G0028610.1 mouse_genomes_project 4 116682726 116710041 + MGP_129S1SvImJ_P0067085 Mknk1 protein_coding protein_coding MGP_129S1SvImJ_T0067086.1 MGP_129S1SvImJ_G0028610.1 mouse_genomes_project 4 116682731 116708111 + MGP_129S1SvImJ_P0067086 Mknk1 protein_coding protein_coding MGP_129S1SvImJ_T0067087.1 MGP_129S1SvImJ_G0028610.1 mouse_genomes_project 4 116682735 116700591 + MGP_129S1SvImJ_P0067087 Mknk1 protein_coding protein_coding MGP_129S1SvImJ_T0067088.1 MGP_129S1SvImJ_G0028610.1 mouse_genomes_project 4 116682751 116706770 + Mknk1 protein_coding processed_transcript MGP_129S1SvImJ_T0067089.1 MGP_129S1SvImJ_G0028610.1 mouse_genomes_project 4 116700525 116722952 + Mknk1 protein_coding processed_transcript MGP_129S1SvImJ_T0067090.1 MGP_129S1SvImJ_G0028610.1 mouse_genomes_project 4 116700599 116720898 + Mknk1 protein_coding processed_transcript MGP_129S1SvImJ_T0067091.1 MGP_129S1SvImJ_G0028610.1 mouse_genomes_project 4 116709775 116710836 + Mknk1 protein_coding processed_transcript MGP_129S1SvImJ_T0067092.1 MGP_129S1SvImJ_G0028610.1 mouse_genomes_project 4 116719058 116721340 + Mknk1 protein_coding processed_transcript MGP_129S1SvImJ_T0014831.1 MGP_129S1SvImJ_G0012920.1 mouse_genomes_project 4 146343716 146344181 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014401.1 MGP_129S1SvImJ_G0012490.1 mouse_genomes_project 4 1030747 1031263 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069869.1 MGP_129S1SvImJ_G0029236.1 mouse_genomes_project 4 160240005 160261276 + Cpsf3l protein_coding processed_transcript MGP_129S1SvImJ_T0069870.1 MGP_129S1SvImJ_G0029236.1 mouse_genomes_project 4 160240005 160261890 + MGP_129S1SvImJ_P0069870 Cpsf3l protein_coding protein_coding MGP_129S1SvImJ_T0069871.1 MGP_129S1SvImJ_G0029236.1 mouse_genomes_project 4 160240005 160261262 + MGP_129S1SvImJ_P0069871 Cpsf3l protein_coding protein_coding MGP_129S1SvImJ_T0069872.1 MGP_129S1SvImJ_G0029236.1 mouse_genomes_project 4 160240026 160242781 + Cpsf3l protein_coding retained_intron MGP_129S1SvImJ_T0069873.1 MGP_129S1SvImJ_G0029236.1 mouse_genomes_project 4 160240074 160259502 + MGP_129S1SvImJ_P0069873 Cpsf3l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069874.1 MGP_129S1SvImJ_G0029236.1 mouse_genomes_project 4 160260361 160261064 + Cpsf3l protein_coding retained_intron MGP_129S1SvImJ_T0069876.1 MGP_129S1SvImJ_G0029236.1 mouse_genomes_project 4 160260699 160261310 + Cpsf3l protein_coding retained_intron MGP_129S1SvImJ_T0067020.1 MGP_129S1SvImJ_G0028587.1 mouse_genomes_project 4 114898689 114928532 + MGP_129S1SvImJ_P0067020 protein_coding protein_coding MGP_129S1SvImJ_T0067524.1 MGP_129S1SvImJ_G0028703.1 mouse_genomes_project 4 120847599 120849450 + MGP_129S1SvImJ_P0067524 Guca2a protein_coding protein_coding MGP_129S1SvImJ_T0099842.1 MGP_129S1SvImJ_G0037909.1 mouse_genomes_project 4 86271491 86271565 + Gm26017 snRNA snRNA MGP_129S1SvImJ_T0067148.1 MGP_129S1SvImJ_G0028623.1 mouse_genomes_project 4 117086097 117129201 + MGP_129S1SvImJ_P0067148 Pik3r3 protein_coding protein_coding MGP_129S1SvImJ_T0067149.1 MGP_129S1SvImJ_G0028623.1 mouse_genomes_project 4 117086140 117173092 + MGP_129S1SvImJ_P0067149 Pik3r3 protein_coding protein_coding MGP_129S1SvImJ_T0067150.1 MGP_129S1SvImJ_G0028623.1 mouse_genomes_project 4 117086175 117169877 + MGP_129S1SvImJ_P0067150 Pik3r3 protein_coding protein_coding MGP_129S1SvImJ_T0004526.1 MGP_129S1SvImJ_G0003936.1 mouse_genomes_project 4 115904016 115907834 + Cyp4x1os antisense antisense MGP_129S1SvImJ_T0099840.1 MGP_129S1SvImJ_G0037907.1 mouse_genomes_project 4 83133686 83133827 - Gm25899 snRNA snRNA MGP_129S1SvImJ_T0067113.1 MGP_129S1SvImJ_G0028616.1 mouse_genomes_project 4 116915434 116923512 - Uqcrh protein_coding processed_transcript MGP_129S1SvImJ_T0067114.1 MGP_129S1SvImJ_G0028616.1 mouse_genomes_project 4 116915434 116923549 - MGP_129S1SvImJ_P0067114 Uqcrh protein_coding protein_coding MGP_129S1SvImJ_T0067115.1 MGP_129S1SvImJ_G0028616.1 mouse_genomes_project 4 116915434 116923509 - MGP_129S1SvImJ_P0067115 Uqcrh protein_coding protein_coding MGP_129S1SvImJ_T0067116.1 MGP_129S1SvImJ_G0028616.1 mouse_genomes_project 4 116915435 116918534 - Uqcrh protein_coding retained_intron MGP_129S1SvImJ_T0067117.1 MGP_129S1SvImJ_G0028616.1 mouse_genomes_project 4 116918556 116923537 - Uqcrh protein_coding retained_intron MGP_129S1SvImJ_T0066276.1 MGP_129S1SvImJ_G0028422.1 mouse_genomes_project 4 88435641 88436214 - MGP_129S1SvImJ_P0066276 Ifna15 protein_coding protein_coding MGP_129S1SvImJ_T0067638.1 MGP_129S1SvImJ_G0028739.1 mouse_genomes_project 4 124691618 124729350 + Pabpc4 protein_coding processed_transcript MGP_129S1SvImJ_T0067639.1 MGP_129S1SvImJ_G0028739.1 mouse_genomes_project 4 124725415 124743903 + MGP_129S1SvImJ_P0067639 Pabpc4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0067640.1 MGP_129S1SvImJ_G0028739.1 mouse_genomes_project 4 124725454 124743995 + MGP_129S1SvImJ_P0067640 Pabpc4 protein_coding protein_coding MGP_129S1SvImJ_T0067641.1 MGP_129S1SvImJ_G0028739.1 mouse_genomes_project 4 124725461 124743902 + MGP_129S1SvImJ_P0067641 Pabpc4 protein_coding protein_coding MGP_129S1SvImJ_T0067642.1 MGP_129S1SvImJ_G0028739.1 mouse_genomes_project 4 124725474 124743892 + MGP_129S1SvImJ_P0067642 Pabpc4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067643.1 MGP_129S1SvImJ_G0028739.1 mouse_genomes_project 4 124725541 124743902 + MGP_129S1SvImJ_P0067643 Pabpc4 protein_coding protein_coding MGP_129S1SvImJ_T0067644.1 MGP_129S1SvImJ_G0028739.1 mouse_genomes_project 4 124725725 124743902 + MGP_129S1SvImJ_P0067644 Pabpc4 protein_coding protein_coding MGP_129S1SvImJ_T0067645.1 MGP_129S1SvImJ_G0028739.1 mouse_genomes_project 4 124739550 124743076 + Pabpc4 protein_coding processed_transcript MGP_129S1SvImJ_T0067646.1 MGP_129S1SvImJ_G0028739.1 mouse_genomes_project 4 124742249 124743902 + Pabpc4 protein_coding retained_intron MGP_129S1SvImJ_T0066292.1 MGP_129S1SvImJ_G0028434.1 mouse_genomes_project 4 88685576 88686149 + MGP_129S1SvImJ_P0066292 Ifna7 protein_coding protein_coding MGP_129S1SvImJ_T0014756.1 MGP_129S1SvImJ_G0012845.1 mouse_genomes_project 4 119502328 119502536 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014415.1 MGP_129S1SvImJ_G0012504.1 mouse_genomes_project 4 6599555 6600218 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066295.1 MGP_129S1SvImJ_G0028437.1 mouse_genomes_project 4 88744877 88745438 + MGP_129S1SvImJ_P0066295 Ifna4 protein_coding protein_coding MGP_129S1SvImJ_T0014794.1 MGP_129S1SvImJ_G0012883.1 mouse_genomes_project 4 128876972 128877182 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010668.1 MGP_129S1SvImJ_G0008784.1 mouse_genomes_project 4 146328825 146328888 - Mir7021 miRNA miRNA MGP_129S1SvImJ_T0007828.1 MGP_129S1SvImJ_G0006400.1 mouse_genomes_project 4 23782178 23848526 - 4930548K13Rik lincRNA lincRNA MGP_129S1SvImJ_T0067598.1 MGP_129S1SvImJ_G0028727.1 mouse_genomes_project 4 124215583 124239554 + MGP_129S1SvImJ_P0067598 Ppt1 protein_coding protein_coding MGP_129S1SvImJ_T0067599.1 MGP_129S1SvImJ_G0028727.1 mouse_genomes_project 4 124215587 124228251 + MGP_129S1SvImJ_P0067599 Ppt1 protein_coding protein_coding MGP_129S1SvImJ_T0067600.1 MGP_129S1SvImJ_G0028727.1 mouse_genomes_project 4 124215591 124239651 + MGP_129S1SvImJ_P0067600 Ppt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067601.1 MGP_129S1SvImJ_G0028727.1 mouse_genomes_project 4 124215595 124230738 + MGP_129S1SvImJ_P0067601 Ppt1 protein_coding protein_coding MGP_129S1SvImJ_T0099875.1 MGP_129S1SvImJ_G0037942.1 mouse_genomes_project 4 131872547 131872699 + Gm23845 snRNA snRNA MGP_129S1SvImJ_T0014816.1 MGP_129S1SvImJ_G0012905.1 mouse_genomes_project 4 138220796 138221274 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065625.1 MGP_129S1SvImJ_G0028263.1 mouse_genomes_project 4 44984608 45349877 - MGP_129S1SvImJ_P0065625 Gabbr2 protein_coding protein_coding MGP_129S1SvImJ_T0065626.1 MGP_129S1SvImJ_G0028263.1 mouse_genomes_project 4 44986803 45019634 - Gabbr2 protein_coding processed_transcript MGP_129S1SvImJ_T0065627.1 MGP_129S1SvImJ_G0028263.1 mouse_genomes_project 4 45008740 45058233 - MGP_129S1SvImJ_P0065627 Gabbr2 protein_coding protein_coding MGP_129S1SvImJ_T0065628.1 MGP_129S1SvImJ_G0028263.1 mouse_genomes_project 4 45139786 45202837 - Gabbr2 protein_coding processed_transcript MGP_129S1SvImJ_T0067597.1 MGP_129S1SvImJ_G0028726.1 mouse_genomes_project 4 124083445 124096798 + MGP_129S1SvImJ_P0067597 9530002B09Rik protein_coding protein_coding MGP_129S1SvImJ_T0010677.1 MGP_129S1SvImJ_G0008793.1 mouse_genomes_project 4 160426947 160427017 - Mir200b miRNA miRNA MGP_129S1SvImJ_T0014403.1 MGP_129S1SvImJ_G0012492.1 mouse_genomes_project 4 2123743 2124215 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067647.1 MGP_129S1SvImJ_G0028740.1 mouse_genomes_project 4 124757711 124789704 - MGP_129S1SvImJ_P0067647 Bmp8a protein_coding protein_coding MGP_129S1SvImJ_T0065623.1 MGP_129S1SvImJ_G0028262.1 mouse_genomes_project 4 44923492 44972836 - MGP_129S1SvImJ_P0065623 Tbc1d2 protein_coding protein_coding MGP_129S1SvImJ_T0065624.1 MGP_129S1SvImJ_G0028262.1 mouse_genomes_project 4 44955902 44972836 - MGP_129S1SvImJ_P0065624 Tbc1d2 protein_coding protein_coding MGP_129S1SvImJ_T0102527.1 MGP_129S1SvImJ_G0040360.1 mouse_genomes_project 4 96266057 96266236 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0068698.1 MGP_129S1SvImJ_G0028968.1 mouse_genomes_project 4 139044003 139127733 + MGP_129S1SvImJ_P0068698 Luzp1 protein_coding protein_coding MGP_129S1SvImJ_T0068699.1 MGP_129S1SvImJ_G0028968.1 mouse_genomes_project 4 139044003 139127729 + MGP_129S1SvImJ_P0068699 Luzp1 protein_coding protein_coding MGP_129S1SvImJ_T0068700.1 MGP_129S1SvImJ_G0028968.1 mouse_genomes_project 4 139044045 139095957 + Luzp1 protein_coding retained_intron MGP_129S1SvImJ_T0068701.1 MGP_129S1SvImJ_G0028968.1 mouse_genomes_project 4 139044092 139119081 + MGP_129S1SvImJ_P0068701 Luzp1 protein_coding protein_coding MGP_129S1SvImJ_T0068702.1 MGP_129S1SvImJ_G0028968.1 mouse_genomes_project 4 139095641 139124808 + MGP_129S1SvImJ_P0068702 Luzp1 protein_coding protein_coding MGP_129S1SvImJ_T0068703.1 MGP_129S1SvImJ_G0028968.1 mouse_genomes_project 4 139118767 139127732 + MGP_129S1SvImJ_P0068703 Luzp1 protein_coding protein_coding MGP_129S1SvImJ_T0068704.1 MGP_129S1SvImJ_G0028968.1 mouse_genomes_project 4 139123678 139133194 + MGP_129S1SvImJ_P0068704 Luzp1 protein_coding protein_coding MGP_129S1SvImJ_T0067166.1 MGP_129S1SvImJ_G0028625.1 mouse_genomes_project 4 117399127 117436726 + MGP_129S1SvImJ_P0067166 Ipp protein_coding protein_coding MGP_129S1SvImJ_T0067167.1 MGP_129S1SvImJ_G0028625.1 mouse_genomes_project 4 117399130 117436734 + MGP_129S1SvImJ_P0067167 Ipp protein_coding protein_coding MGP_129S1SvImJ_T0004554.1 MGP_129S1SvImJ_G0003960.1 mouse_genomes_project 4 129926170 129963061 - Csmd2os antisense antisense MGP_129S1SvImJ_T0004555.1 MGP_129S1SvImJ_G0003960.1 mouse_genomes_project 4 129926170 129960235 - Csmd2os antisense antisense MGP_129S1SvImJ_T0008031.1 MGP_129S1SvImJ_G0006557.1 mouse_genomes_project 4 152065429 152068522 - Gm13200 lincRNA lincRNA MGP_129S1SvImJ_T0066239.1 MGP_129S1SvImJ_G0028415.1 mouse_genomes_project 4 86633282 86636035 - MGP_129S1SvImJ_P0066239 Rps6 protein_coding protein_coding MGP_129S1SvImJ_T0066240.1 MGP_129S1SvImJ_G0028415.1 mouse_genomes_project 4 86633426 86635968 - Rps6 protein_coding processed_transcript MGP_129S1SvImJ_T0066241.1 MGP_129S1SvImJ_G0028415.1 mouse_genomes_project 4 86634374 86635977 - Rps6 protein_coding processed_transcript MGP_129S1SvImJ_T0066242.1 MGP_129S1SvImJ_G0028415.1 mouse_genomes_project 4 86634484 86635955 - Rps6 protein_coding processed_transcript MGP_129S1SvImJ_T0066466.1 MGP_129S1SvImJ_G0028479.1 mouse_genomes_project 4 99419582 99486819 + MGP_129S1SvImJ_P0066466 Atg4c protein_coding protein_coding MGP_129S1SvImJ_T0066467.1 MGP_129S1SvImJ_G0028479.1 mouse_genomes_project 4 99419795 99486815 + MGP_129S1SvImJ_P0066467 Atg4c protein_coding protein_coding MGP_129S1SvImJ_T0066468.1 MGP_129S1SvImJ_G0028479.1 mouse_genomes_project 4 99446048 99449607 + Atg4c protein_coding processed_transcript MGP_129S1SvImJ_T0008042.1 MGP_129S1SvImJ_G0006568.1 mouse_genomes_project 4 158136162 158137443 + Gm13115 lincRNA lincRNA MGP_129S1SvImJ_T0014772.1 MGP_129S1SvImJ_G0012861.1 mouse_genomes_project 4 122692425 122692753 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066222.1 MGP_129S1SvImJ_G0028411.1 mouse_genomes_project 4 86338249 86339867 + MGP_129S1SvImJ_P0066222 Rraga protein_coding protein_coding MGP_129S1SvImJ_T0014599.1 MGP_129S1SvImJ_G0012688.1 mouse_genomes_project 4 62931632 62933720 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065435.1 MGP_129S1SvImJ_G0028222.1 mouse_genomes_project 4 41827690 41833496 - MGP_129S1SvImJ_P0065435 Olfr70 protein_coding protein_coding MGP_129S1SvImJ_T0014609.1 MGP_129S1SvImJ_G0012698.1 mouse_genomes_project 4 69031656 69032394 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014515.1 MGP_129S1SvImJ_G0012604.1 mouse_genomes_project 4 32524335 32525717 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014603.1 MGP_129S1SvImJ_G0012692.1 mouse_genomes_project 4 65829749 65830224 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014667.1 MGP_129S1SvImJ_G0012756.1 mouse_genomes_project 4 90437834 90438593 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066852.1 MGP_129S1SvImJ_G0028557.1 mouse_genomes_project 4 109329572 109345131 + Orc1 protein_coding processed_transcript MGP_129S1SvImJ_T0066853.1 MGP_129S1SvImJ_G0028557.1 mouse_genomes_project 4 109329583 109345272 + Orc1 protein_coding processed_transcript MGP_129S1SvImJ_T0066854.1 MGP_129S1SvImJ_G0028557.1 mouse_genomes_project 4 109329603 109366373 + MGP_129S1SvImJ_P0066854 Orc1 protein_coding protein_coding MGP_129S1SvImJ_T0066855.1 MGP_129S1SvImJ_G0028557.1 mouse_genomes_project 4 109337673 109338456 + Orc1 protein_coding processed_transcript MGP_129S1SvImJ_T0066856.1 MGP_129S1SvImJ_G0028557.1 mouse_genomes_project 4 109353548 109355501 + Orc1 protein_coding processed_transcript MGP_129S1SvImJ_T0066018.1 MGP_129S1SvImJ_G0028370.1 mouse_genomes_project 4 62576240 62603852 + MGP_129S1SvImJ_P0066018 Tmem268 protein_coding protein_coding MGP_129S1SvImJ_T0066019.1 MGP_129S1SvImJ_G0028370.1 mouse_genomes_project 4 62576315 62579951 + Tmem268 protein_coding processed_transcript MGP_129S1SvImJ_T0066020.1 MGP_129S1SvImJ_G0028370.1 mouse_genomes_project 4 62577686 62587466 + MGP_129S1SvImJ_P0066020 Tmem268 protein_coding protein_coding MGP_129S1SvImJ_T0066021.1 MGP_129S1SvImJ_G0028370.1 mouse_genomes_project 4 62577686 62587497 + MGP_129S1SvImJ_P0066021 Tmem268 protein_coding protein_coding MGP_129S1SvImJ_T0066022.1 MGP_129S1SvImJ_G0028370.1 mouse_genomes_project 4 62577819 62603848 + MGP_129S1SvImJ_P0066022 Tmem268 protein_coding protein_coding MGP_129S1SvImJ_T0067107.1 MGP_129S1SvImJ_G0028615.1 mouse_genomes_project 4 116881742 116902313 - MGP_129S1SvImJ_P0067107 protein_coding protein_coding MGP_129S1SvImJ_T0067108.1 MGP_129S1SvImJ_G0028615.1 mouse_genomes_project 4 116881905 116896927 - MGP_129S1SvImJ_P0067108 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067109.1 MGP_129S1SvImJ_G0028615.1 mouse_genomes_project 4 116882807 116901817 - MGP_129S1SvImJ_P0067109 protein_coding protein_coding MGP_129S1SvImJ_T0067110.1 MGP_129S1SvImJ_G0028615.1 mouse_genomes_project 4 116888959 116895421 - protein_coding processed_transcript MGP_129S1SvImJ_T0067111.1 MGP_129S1SvImJ_G0028615.1 mouse_genomes_project 4 116894295 116896796 - protein_coding retained_intron MGP_129S1SvImJ_T0067112.1 MGP_129S1SvImJ_G0028615.1 mouse_genomes_project 4 116896896 116897833 - protein_coding processed_transcript MGP_129S1SvImJ_T0004514.1 MGP_129S1SvImJ_G0003930.1 mouse_genomes_project 4 108039475 108041790 - Gm12869 antisense antisense MGP_129S1SvImJ_T0067553.1 MGP_129S1SvImJ_G0028710.1 mouse_genomes_project 4 121799237 121829939 - MGP_129S1SvImJ_P0067553 Ctps protein_coding protein_coding MGP_129S1SvImJ_T0067554.1 MGP_129S1SvImJ_G0028710.1 mouse_genomes_project 4 121801280 121804475 - Ctps protein_coding processed_transcript MGP_129S1SvImJ_T0067555.1 MGP_129S1SvImJ_G0028710.1 mouse_genomes_project 4 121801338 121807507 - Ctps protein_coding processed_transcript MGP_129S1SvImJ_T0065439.1 MGP_129S1SvImJ_G0028225.1 mouse_genomes_project 4 41906755 41907715 - MGP_129S1SvImJ_P0065439 Olfr159 protein_coding protein_coding MGP_129S1SvImJ_T0066471.1 MGP_129S1SvImJ_G0028482.1 mouse_genomes_project 4 99983814 99998295 + Alg6 protein_coding retained_intron MGP_129S1SvImJ_T0066472.1 MGP_129S1SvImJ_G0028482.1 mouse_genomes_project 4 99983815 100025520 + Alg6 protein_coding retained_intron MGP_129S1SvImJ_T0066473.1 MGP_129S1SvImJ_G0028482.1 mouse_genomes_project 4 99983815 100026669 + MGP_129S1SvImJ_P0066473 Alg6 protein_coding protein_coding MGP_129S1SvImJ_T0066474.1 MGP_129S1SvImJ_G0028482.1 mouse_genomes_project 4 99983826 100007757 + Alg6 protein_coding processed_transcript MGP_129S1SvImJ_T0066475.1 MGP_129S1SvImJ_G0028482.1 mouse_genomes_project 4 99983826 100016283 + MGP_129S1SvImJ_P0066475 Alg6 protein_coding protein_coding MGP_129S1SvImJ_T0066476.1 MGP_129S1SvImJ_G0028482.1 mouse_genomes_project 4 99983826 100016092 + MGP_129S1SvImJ_P0066476 Alg6 protein_coding protein_coding MGP_129S1SvImJ_T0066477.1 MGP_129S1SvImJ_G0028482.1 mouse_genomes_project 4 99987237 100000843 + Alg6 protein_coding retained_intron MGP_129S1SvImJ_T0018097.1 MGP_129S1SvImJ_G0015557.1 mouse_genomes_project 4 94514275 94530884 - Gm12655 processed_transcript processed_transcript MGP_129S1SvImJ_T0018098.1 MGP_129S1SvImJ_G0015557.1 mouse_genomes_project 4 94515375 94530871 - Gm12655 processed_transcript processed_transcript MGP_129S1SvImJ_T0101128.1 MGP_129S1SvImJ_G0039195.1 mouse_genomes_project 4 72806462 72806595 - Gm24170 snoRNA snoRNA MGP_129S1SvImJ_T0066668.1 MGP_129S1SvImJ_G0028528.1 mouse_genomes_project 4 107568118 107697629 + Ssbp3 protein_coding processed_transcript MGP_129S1SvImJ_T0066669.1 MGP_129S1SvImJ_G0028528.1 mouse_genomes_project 4 107569024 107718071 + MGP_129S1SvImJ_P0066669 Ssbp3 protein_coding protein_coding MGP_129S1SvImJ_T0066670.1 MGP_129S1SvImJ_G0028528.1 mouse_genomes_project 4 107569065 107705304 + MGP_129S1SvImJ_P0066670 Ssbp3 protein_coding protein_coding MGP_129S1SvImJ_T0066671.1 MGP_129S1SvImJ_G0028528.1 mouse_genomes_project 4 107569087 107716944 + MGP_129S1SvImJ_P0066671 Ssbp3 protein_coding protein_coding MGP_129S1SvImJ_T0066672.1 MGP_129S1SvImJ_G0028528.1 mouse_genomes_project 4 107569221 107716840 + MGP_129S1SvImJ_P0066672 Ssbp3 protein_coding protein_coding MGP_129S1SvImJ_T0066673.1 MGP_129S1SvImJ_G0028528.1 mouse_genomes_project 4 107569421 107676904 + Ssbp3 protein_coding processed_transcript MGP_129S1SvImJ_T0066674.1 MGP_129S1SvImJ_G0028528.1 mouse_genomes_project 4 107569858 107716857 + Ssbp3 protein_coding processed_transcript MGP_129S1SvImJ_T0066675.1 MGP_129S1SvImJ_G0028528.1 mouse_genomes_project 4 107580735 107697581 + Ssbp3 protein_coding processed_transcript MGP_129S1SvImJ_T0066676.1 MGP_129S1SvImJ_G0028528.1 mouse_genomes_project 4 107580775 107704810 + Ssbp3 protein_coding processed_transcript MGP_129S1SvImJ_T0066677.1 MGP_129S1SvImJ_G0028528.1 mouse_genomes_project 4 107600959 107716885 + Ssbp3 protein_coding processed_transcript MGP_129S1SvImJ_T0066678.1 MGP_129S1SvImJ_G0028528.1 mouse_genomes_project 4 107616346 107717069 + Ssbp3 protein_coding processed_transcript MGP_129S1SvImJ_T0066679.1 MGP_129S1SvImJ_G0028528.1 mouse_genomes_project 4 107628261 107697627 + MGP_129S1SvImJ_P0066679 Ssbp3 protein_coding protein_coding MGP_129S1SvImJ_T0066680.1 MGP_129S1SvImJ_G0028528.1 mouse_genomes_project 4 107694613 107703925 + Ssbp3 protein_coding processed_transcript MGP_129S1SvImJ_T0066681.1 MGP_129S1SvImJ_G0028528.1 mouse_genomes_project 4 107697391 107698045 + Ssbp3 protein_coding processed_transcript MGP_129S1SvImJ_T0066682.1 MGP_129S1SvImJ_G0028528.1 mouse_genomes_project 4 107704763 107716861 + Ssbp3 protein_coding processed_transcript MGP_129S1SvImJ_T0066683.1 MGP_129S1SvImJ_G0028528.1 mouse_genomes_project 4 107704794 107707219 + Ssbp3 protein_coding processed_transcript MGP_129S1SvImJ_T0066684.1 MGP_129S1SvImJ_G0028528.1 mouse_genomes_project 4 107715295 107716792 + Ssbp3 protein_coding processed_transcript MGP_129S1SvImJ_T0066326.1 MGP_129S1SvImJ_G0028450.1 mouse_genomes_project 4 94623946 94632852 - Plaa protein_coding processed_transcript MGP_129S1SvImJ_T0066327.1 MGP_129S1SvImJ_G0028450.1 mouse_genomes_project 4 94625599 94659553 - MGP_129S1SvImJ_P0066327 Plaa protein_coding protein_coding MGP_129S1SvImJ_T0066328.1 MGP_129S1SvImJ_G0028450.1 mouse_genomes_project 4 94628119 94639914 - MGP_129S1SvImJ_P0066328 Plaa protein_coding protein_coding MGP_129S1SvImJ_T0066329.1 MGP_129S1SvImJ_G0028450.1 mouse_genomes_project 4 94630325 94639893 - Plaa protein_coding processed_transcript MGP_129S1SvImJ_T0066330.1 MGP_129S1SvImJ_G0028450.1 mouse_genomes_project 4 94642175 94659444 - Plaa protein_coding processed_transcript MGP_129S1SvImJ_T0066331.1 MGP_129S1SvImJ_G0028450.1 mouse_genomes_project 4 94646109 94659490 - Plaa protein_coding processed_transcript MGP_129S1SvImJ_T0066918.1 MGP_129S1SvImJ_G0028569.1 mouse_genomes_project 4 110062104 110162106 + MGP_129S1SvImJ_P0066918 Eps15 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066919.1 MGP_129S1SvImJ_G0028569.1 mouse_genomes_project 4 110062177 110091954 + MGP_129S1SvImJ_P0066919 Eps15 protein_coding protein_coding MGP_129S1SvImJ_T0066920.1 MGP_129S1SvImJ_G0028569.1 mouse_genomes_project 4 110062199 110164232 + MGP_129S1SvImJ_P0066920 Eps15 protein_coding protein_coding MGP_129S1SvImJ_T0066921.1 MGP_129S1SvImJ_G0028569.1 mouse_genomes_project 4 110062213 110161891 + MGP_129S1SvImJ_P0066921 Eps15 protein_coding protein_coding MGP_129S1SvImJ_T0066922.1 MGP_129S1SvImJ_G0028569.1 mouse_genomes_project 4 110062213 110161891 + MGP_129S1SvImJ_P0066922 Eps15 protein_coding protein_coding MGP_129S1SvImJ_T0066923.1 MGP_129S1SvImJ_G0028569.1 mouse_genomes_project 4 110083530 110084986 + Eps15 protein_coding retained_intron MGP_129S1SvImJ_T0066924.1 MGP_129S1SvImJ_G0028569.1 mouse_genomes_project 4 110088195 110092253 + Eps15 protein_coding retained_intron MGP_129S1SvImJ_T0066925.1 MGP_129S1SvImJ_G0028569.1 mouse_genomes_project 4 110121980 110162985 + MGP_129S1SvImJ_P0066925 Eps15 protein_coding protein_coding MGP_129S1SvImJ_T0066926.1 MGP_129S1SvImJ_G0028569.1 mouse_genomes_project 4 110122174 110143338 + Eps15 protein_coding retained_intron MGP_129S1SvImJ_T0066927.1 MGP_129S1SvImJ_G0028569.1 mouse_genomes_project 4 110147042 110162202 + MGP_129S1SvImJ_P0066927 Eps15 protein_coding protein_coding MGP_129S1SvImJ_T0066928.1 MGP_129S1SvImJ_G0028569.1 mouse_genomes_project 4 110147086 110159284 + Eps15 protein_coding processed_transcript MGP_129S1SvImJ_T0101129.1 MGP_129S1SvImJ_G0039196.1 mouse_genomes_project 4 73918133 73918271 + Gm26379 snoRNA snoRNA MGP_129S1SvImJ_T0014424.1 MGP_129S1SvImJ_G0012513.1 mouse_genomes_project 4 8328829 8329682 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010600.1 MGP_129S1SvImJ_G0008716.1 mouse_genomes_project 4 38756499 38756582 - Mir5123 miRNA miRNA MGP_129S1SvImJ_T0068271.1 MGP_129S1SvImJ_G0028872.1 mouse_genomes_project 4 134652960 134671333 - MGP_129S1SvImJ_P0068271 Sesn2 protein_coding protein_coding MGP_129S1SvImJ_T0067900.1 MGP_129S1SvImJ_G0028804.1 mouse_genomes_project 4 130432563 130435740 - MGP_129S1SvImJ_P0067900 Tlr12 protein_coding protein_coding MGP_129S1SvImJ_T0067901.1 MGP_129S1SvImJ_G0028804.1 mouse_genomes_project 4 130434622 130435713 - Tlr12 protein_coding processed_transcript MGP_129S1SvImJ_T0011603.1 MGP_129S1SvImJ_G0009719.1 mouse_genomes_project 4 124941894 124942000 + Gm23548 misc_RNA misc_RNA MGP_129S1SvImJ_T0065686.1 MGP_129S1SvImJ_G0028277.1 mouse_genomes_project 4 47094462 47104214 + MGP_129S1SvImJ_P0065686 Murc protein_coding protein_coding MGP_129S1SvImJ_T0004587.1 MGP_129S1SvImJ_G0003987.1 mouse_genomes_project 4 144455174 144466427 + Gm13075 antisense antisense MGP_129S1SvImJ_T0004588.1 MGP_129S1SvImJ_G0003987.1 mouse_genomes_project 4 144455202 144467392 + Gm13075 antisense antisense MGP_129S1SvImJ_T0014688.1 MGP_129S1SvImJ_G0012777.1 mouse_genomes_project 4 98419401 98419894 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014807.1 MGP_129S1SvImJ_G0012896.1 mouse_genomes_project 4 136185952 136186136 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010629.1 MGP_129S1SvImJ_G0008745.1 mouse_genomes_project 4 109781033 109781109 + Mir761 miRNA miRNA MGP_129S1SvImJ_T0014512.1 MGP_129S1SvImJ_G0012601.1 mouse_genomes_project 4 31967998 31968452 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007976.1 MGP_129S1SvImJ_G0006518.1 mouse_genomes_project 4 131885061 131887991 + E330017L17Rik lincRNA lincRNA MGP_129S1SvImJ_T0007977.1 MGP_129S1SvImJ_G0006518.1 mouse_genomes_project 4 131885071 131887856 + E330017L17Rik lincRNA lincRNA MGP_129S1SvImJ_T0007978.1 MGP_129S1SvImJ_G0006518.1 mouse_genomes_project 4 131885103 131887611 + E330017L17Rik lincRNA lincRNA MGP_129S1SvImJ_T0007979.1 MGP_129S1SvImJ_G0006518.1 mouse_genomes_project 4 131885278 131898166 + E330017L17Rik lincRNA lincRNA MGP_129S1SvImJ_T0010592.1 MGP_129S1SvImJ_G0008708.1 mouse_genomes_project 4 20734968 20735058 - Gm25978 miRNA miRNA MGP_129S1SvImJ_T0066532.1 MGP_129S1SvImJ_G0028496.1 mouse_genomes_project 4 102162684 102166109 - MGP_129S1SvImJ_P0066532 protein_coding protein_coding MGP_129S1SvImJ_T0067890.1 MGP_129S1SvImJ_G0028802.1 mouse_genomes_project 4 130062672 130063418 - MGP_129S1SvImJ_P0067890 Hmgb4 protein_coding protein_coding MGP_129S1SvImJ_T0064590.1 MGP_129S1SvImJ_G0028029.1 mouse_genomes_project 4 542061 565177 - MGP_129S1SvImJ_P0064590 Sdr16c6 protein_coding protein_coding MGP_129S1SvImJ_T0064591.1 MGP_129S1SvImJ_G0028029.1 mouse_genomes_project 4 542063 565768 - MGP_129S1SvImJ_P0064591 Sdr16c6 protein_coding protein_coding MGP_129S1SvImJ_T0014493.1 MGP_129S1SvImJ_G0012582.1 mouse_genomes_project 4 26427161 26427340 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014777.1 MGP_129S1SvImJ_G0012866.1 mouse_genomes_project 4 124684767 124688172 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067418.1 MGP_129S1SvImJ_G0028674.1 mouse_genomes_project 4 119690474 119697276 + MGP_129S1SvImJ_P0067418 Ebna1bp2 protein_coding protein_coding MGP_129S1SvImJ_T0067419.1 MGP_129S1SvImJ_G0028674.1 mouse_genomes_project 4 119690523 119691607 + Ebna1bp2 protein_coding processed_transcript MGP_129S1SvImJ_T0067420.1 MGP_129S1SvImJ_G0028674.1 mouse_genomes_project 4 119690525 119691338 + Ebna1bp2 protein_coding processed_transcript MGP_129S1SvImJ_T0067421.1 MGP_129S1SvImJ_G0028674.1 mouse_genomes_project 4 119690835 119693689 + MGP_129S1SvImJ_P0067421 Ebna1bp2 protein_coding protein_coding MGP_129S1SvImJ_T0067422.1 MGP_129S1SvImJ_G0028674.1 mouse_genomes_project 4 119690901 119695117 + Ebna1bp2 protein_coding processed_transcript MGP_129S1SvImJ_T0014440.1 MGP_129S1SvImJ_G0012529.1 mouse_genomes_project 4 13153183 13154345 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066002.1 MGP_129S1SvImJ_G0028368.1 mouse_genomes_project 4 62420908 62510144 - MGP_129S1SvImJ_P0066002 Whrn protein_coding protein_coding MGP_129S1SvImJ_T0066003.1 MGP_129S1SvImJ_G0028368.1 mouse_genomes_project 4 62420913 62507305 - Whrn protein_coding processed_transcript MGP_129S1SvImJ_T0066004.1 MGP_129S1SvImJ_G0028368.1 mouse_genomes_project 4 62420913 62439315 - Whrn protein_coding retained_intron MGP_129S1SvImJ_T0066005.1 MGP_129S1SvImJ_G0028368.1 mouse_genomes_project 4 62420913 62439315 - Whrn protein_coding retained_intron MGP_129S1SvImJ_T0066006.1 MGP_129S1SvImJ_G0028368.1 mouse_genomes_project 4 62420913 62510862 - MGP_129S1SvImJ_P0066006 Whrn protein_coding protein_coding MGP_129S1SvImJ_T0066007.1 MGP_129S1SvImJ_G0028368.1 mouse_genomes_project 4 62420913 62510862 - MGP_129S1SvImJ_P0066007 Whrn protein_coding protein_coding MGP_129S1SvImJ_T0066008.1 MGP_129S1SvImJ_G0028368.1 mouse_genomes_project 4 62420913 62510862 - MGP_129S1SvImJ_P0066008 Whrn protein_coding protein_coding MGP_129S1SvImJ_T0066009.1 MGP_129S1SvImJ_G0028368.1 mouse_genomes_project 4 62420913 62510862 - MGP_129S1SvImJ_P0066009 Whrn protein_coding protein_coding MGP_129S1SvImJ_T0066010.1 MGP_129S1SvImJ_G0028368.1 mouse_genomes_project 4 62425473 62437922 - MGP_129S1SvImJ_P0066010 Whrn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066011.1 MGP_129S1SvImJ_G0028368.1 mouse_genomes_project 4 62431701 62437995 - Whrn protein_coding processed_transcript MGP_129S1SvImJ_T0066012.1 MGP_129S1SvImJ_G0028368.1 mouse_genomes_project 4 62437425 62510902 - MGP_129S1SvImJ_P0066012 Whrn protein_coding protein_coding MGP_129S1SvImJ_T0066013.1 MGP_129S1SvImJ_G0028368.1 mouse_genomes_project 4 62440793 62472095 - Whrn protein_coding retained_intron MGP_129S1SvImJ_T0066014.1 MGP_129S1SvImJ_G0028368.1 mouse_genomes_project 4 62442221 62484970 - MGP_129S1SvImJ_P0066014 Whrn protein_coding protein_coding MGP_129S1SvImJ_T0066015.1 MGP_129S1SvImJ_G0028368.1 mouse_genomes_project 4 62470955 62509670 - MGP_129S1SvImJ_P0066015 Whrn protein_coding protein_coding MGP_129S1SvImJ_T0066016.1 MGP_129S1SvImJ_G0028368.1 mouse_genomes_project 4 62471612 62509588 - Whrn protein_coding retained_intron MGP_129S1SvImJ_T0014811.1 MGP_129S1SvImJ_G0012900.1 mouse_genomes_project 4 137714296 137714606 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069589.1 MGP_129S1SvImJ_G0029183.1 mouse_genomes_project 4 156602095 156696846 + Nphp4 protein_coding processed_transcript MGP_129S1SvImJ_T0069590.1 MGP_129S1SvImJ_G0029183.1 mouse_genomes_project 4 156603289 156696575 + MGP_129S1SvImJ_P0069590 Nphp4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0069591.1 MGP_129S1SvImJ_G0029183.1 mouse_genomes_project 4 156603566 156615977 + Nphp4 protein_coding processed_transcript MGP_129S1SvImJ_T0069592.1 MGP_129S1SvImJ_G0029183.1 mouse_genomes_project 4 156613883 156623753 + Nphp4 protein_coding processed_transcript MGP_129S1SvImJ_T0069593.1 MGP_129S1SvImJ_G0029183.1 mouse_genomes_project 4 156628408 156643547 + Nphp4 protein_coding processed_transcript MGP_129S1SvImJ_T0064738.1 MGP_129S1SvImJ_G0028059.1 mouse_genomes_project 4 8675458 8677156 - MGP_129S1SvImJ_P0064738 Gm10604 protein_coding protein_coding MGP_129S1SvImJ_T0011605.1 MGP_129S1SvImJ_G0009721.1 mouse_genomes_project 4 146560393 146560701 + Gm26313 misc_RNA misc_RNA MGP_129S1SvImJ_T0064929.1 MGP_129S1SvImJ_G0028112.1 mouse_genomes_project 4 30125972 30250876 + MGP_129S1SvImJ_P0064929 Mdn1 protein_coding protein_coding MGP_129S1SvImJ_T0064930.1 MGP_129S1SvImJ_G0028112.1 mouse_genomes_project 4 30125972 30250886 + MGP_129S1SvImJ_P0064930 Mdn1 protein_coding protein_coding MGP_129S1SvImJ_T0064931.1 MGP_129S1SvImJ_G0028112.1 mouse_genomes_project 4 30126036 30134070 + Mdn1 protein_coding processed_transcript MGP_129S1SvImJ_T0064932.1 MGP_129S1SvImJ_G0028112.1 mouse_genomes_project 4 30126104 30250876 + MGP_129S1SvImJ_P0064932 Mdn1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0064933.1 MGP_129S1SvImJ_G0028112.1 mouse_genomes_project 4 30141458 30149503 + Mdn1 protein_coding processed_transcript MGP_129S1SvImJ_T0064934.1 MGP_129S1SvImJ_G0028112.1 mouse_genomes_project 4 30165450 30166548 + Mdn1 protein_coding processed_transcript MGP_129S1SvImJ_T0064935.1 MGP_129S1SvImJ_G0028112.1 mouse_genomes_project 4 30175432 30250867 + Mdn1 protein_coding processed_transcript MGP_129S1SvImJ_T0064936.1 MGP_129S1SvImJ_G0028112.1 mouse_genomes_project 4 30193634 30202179 + Mdn1 protein_coding processed_transcript MGP_129S1SvImJ_T0064937.1 MGP_129S1SvImJ_G0028112.1 mouse_genomes_project 4 30196598 30198954 + Mdn1 protein_coding processed_transcript MGP_129S1SvImJ_T0064938.1 MGP_129S1SvImJ_G0028112.1 mouse_genomes_project 4 30221302 30224809 + Mdn1 protein_coding processed_transcript MGP_129S1SvImJ_T0064939.1 MGP_129S1SvImJ_G0028112.1 mouse_genomes_project 4 30221302 30222846 + Mdn1 protein_coding processed_transcript MGP_129S1SvImJ_T0064940.1 MGP_129S1SvImJ_G0028112.1 mouse_genomes_project 4 30235024 30238796 + Mdn1 protein_coding processed_transcript MGP_129S1SvImJ_T0069541.1 MGP_129S1SvImJ_G0029176.1 mouse_genomes_project 4 156381789 156392963 + MGP_129S1SvImJ_P0069541 Gpr153 protein_coding protein_coding MGP_129S1SvImJ_T0069542.1 MGP_129S1SvImJ_G0029176.1 mouse_genomes_project 4 156381919 156392963 + MGP_129S1SvImJ_P0069542 Gpr153 protein_coding protein_coding MGP_129S1SvImJ_T0069543.1 MGP_129S1SvImJ_G0029176.1 mouse_genomes_project 4 156386635 156392963 + MGP_129S1SvImJ_P0069543 Gpr153 protein_coding protein_coding MGP_129S1SvImJ_T0069544.1 MGP_129S1SvImJ_G0029176.1 mouse_genomes_project 4 156389991 156392962 + Gpr153 protein_coding processed_transcript MGP_129S1SvImJ_T0068084.1 MGP_129S1SvImJ_G0028838.1 mouse_genomes_project 4 131649059 131693277 - MGP_129S1SvImJ_P0068084 Khdrbs1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068085.1 MGP_129S1SvImJ_G0028838.1 mouse_genomes_project 4 131649718 131659735 - Khdrbs1 protein_coding retained_intron MGP_129S1SvImJ_T0068086.1 MGP_129S1SvImJ_G0028838.1 mouse_genomes_project 4 131659733 131693276 - MGP_129S1SvImJ_P0068086 Khdrbs1 protein_coding protein_coding MGP_129S1SvImJ_T0068087.1 MGP_129S1SvImJ_G0028838.1 mouse_genomes_project 4 131676966 131693283 - Khdrbs1 protein_coding retained_intron MGP_129S1SvImJ_T0066929.1 MGP_129S1SvImJ_G0028570.1 mouse_genomes_project 4 110183064 110204550 + MGP_129S1SvImJ_P0066929 Ttc39a protein_coding protein_coding MGP_129S1SvImJ_T0066930.1 MGP_129S1SvImJ_G0028570.1 mouse_genomes_project 4 110183526 110221113 + MGP_129S1SvImJ_P0066930 Ttc39a protein_coding protein_coding MGP_129S1SvImJ_T0066931.1 MGP_129S1SvImJ_G0028570.1 mouse_genomes_project 4 110183549 110200657 + MGP_129S1SvImJ_P0066931 Ttc39a protein_coding protein_coding MGP_129S1SvImJ_T0066932.1 MGP_129S1SvImJ_G0028570.1 mouse_genomes_project 4 110183568 110199362 + Ttc39a protein_coding processed_transcript MGP_129S1SvImJ_T0066933.1 MGP_129S1SvImJ_G0028570.1 mouse_genomes_project 4 110191213 110204618 + MGP_129S1SvImJ_P0066933 Ttc39a protein_coding protein_coding MGP_129S1SvImJ_T0066934.1 MGP_129S1SvImJ_G0028570.1 mouse_genomes_project 4 110192086 110220750 + MGP_129S1SvImJ_P0066934 Ttc39a protein_coding protein_coding MGP_129S1SvImJ_T0066935.1 MGP_129S1SvImJ_G0028570.1 mouse_genomes_project 4 110192212 110197800 + Ttc39a protein_coding processed_transcript MGP_129S1SvImJ_T0066936.1 MGP_129S1SvImJ_G0028570.1 mouse_genomes_project 4 110197364 110202781 + MGP_129S1SvImJ_P0066936 Ttc39a protein_coding protein_coding MGP_129S1SvImJ_T0068288.1 MGP_129S1SvImJ_G0028876.1 mouse_genomes_project 4 134817358 134878900 + MGP_129S1SvImJ_P0068288 Eya3 protein_coding protein_coding MGP_129S1SvImJ_T0068289.1 MGP_129S1SvImJ_G0028876.1 mouse_genomes_project 4 134817427 134908217 + MGP_129S1SvImJ_P0068289 Eya3 protein_coding protein_coding MGP_129S1SvImJ_T0068290.1 MGP_129S1SvImJ_G0028876.1 mouse_genomes_project 4 134817429 134883153 + Eya3 protein_coding processed_transcript MGP_129S1SvImJ_T0068291.1 MGP_129S1SvImJ_G0028876.1 mouse_genomes_project 4 134817435 134877112 + Eya3 protein_coding processed_transcript MGP_129S1SvImJ_T0068292.1 MGP_129S1SvImJ_G0028876.1 mouse_genomes_project 4 134817441 134904055 + MGP_129S1SvImJ_P0068292 Eya3 protein_coding protein_coding MGP_129S1SvImJ_T0068293.1 MGP_129S1SvImJ_G0028876.1 mouse_genomes_project 4 134817450 134904834 + Eya3 protein_coding processed_transcript MGP_129S1SvImJ_T0068294.1 MGP_129S1SvImJ_G0028876.1 mouse_genomes_project 4 134817456 134906175 + Eya3 protein_coding processed_transcript MGP_129S1SvImJ_T0068295.1 MGP_129S1SvImJ_G0028876.1 mouse_genomes_project 4 134817488 134879085 + Eya3 protein_coding processed_transcript MGP_129S1SvImJ_T0068296.1 MGP_129S1SvImJ_G0028876.1 mouse_genomes_project 4 134839191 134906141 + Eya3 protein_coding processed_transcript MGP_129S1SvImJ_T0068297.1 MGP_129S1SvImJ_G0028876.1 mouse_genomes_project 4 134885085 134895813 + Eya3 protein_coding processed_transcript MGP_129S1SvImJ_T0068298.1 MGP_129S1SvImJ_G0028876.1 mouse_genomes_project 4 134888466 134904345 + Eya3 protein_coding processed_transcript MGP_129S1SvImJ_T0018119.1 MGP_129S1SvImJ_G0015573.1 mouse_genomes_project 4 124348334 124350501 + 4933421A08Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0066343.1 MGP_129S1SvImJ_G0028455.1 mouse_genomes_project 4 94984998 95022039 - MGP_129S1SvImJ_P0066343 Mysm1 protein_coding protein_coding MGP_129S1SvImJ_T0066344.1 MGP_129S1SvImJ_G0028455.1 mouse_genomes_project 4 94985021 94996289 - Mysm1 protein_coding processed_transcript MGP_129S1SvImJ_T0066345.1 MGP_129S1SvImJ_G0028455.1 mouse_genomes_project 4 94990011 94996420 - Mysm1 protein_coding processed_transcript MGP_129S1SvImJ_T0066346.1 MGP_129S1SvImJ_G0028455.1 mouse_genomes_project 4 95007269 95022014 - Mysm1 protein_coding processed_transcript MGP_129S1SvImJ_T0066347.1 MGP_129S1SvImJ_G0028455.1 mouse_genomes_project 4 95008496 95021981 - Mysm1 protein_coding processed_transcript MGP_129S1SvImJ_T0066348.1 MGP_129S1SvImJ_G0028455.1 mouse_genomes_project 4 95008536 95013539 - Mysm1 protein_coding processed_transcript MGP_129S1SvImJ_T0066349.1 MGP_129S1SvImJ_G0028455.1 mouse_genomes_project 4 95008628 95022017 - Mysm1 protein_coding processed_transcript MGP_129S1SvImJ_T0066350.1 MGP_129S1SvImJ_G0028455.1 mouse_genomes_project 4 95013165 95021992 - Mysm1 protein_coding processed_transcript MGP_129S1SvImJ_T0066351.1 MGP_129S1SvImJ_G0028455.1 mouse_genomes_project 4 95015326 95022014 - Mysm1 protein_coding processed_transcript MGP_129S1SvImJ_T0011595.1 MGP_129S1SvImJ_G0009711.1 mouse_genomes_project 4 98428172 98428286 + Gm24203 misc_RNA misc_RNA MGP_129S1SvImJ_T0067740.1 MGP_129S1SvImJ_G0028765.1 mouse_genomes_project 4 126707201 126716618 - MGP_129S1SvImJ_P0067740 Zc3h12a protein_coding protein_coding MGP_129S1SvImJ_T0067741.1 MGP_129S1SvImJ_G0028765.1 mouse_genomes_project 4 126708871 126711298 - Zc3h12a protein_coding retained_intron MGP_129S1SvImJ_T0066104.1 MGP_129S1SvImJ_G0028393.1 mouse_genomes_project 4 79519115 79519628 - MGP_129S1SvImJ_P0066104 mt-Nd6 protein_coding protein_coding MGP_129S1SvImJ_T0101121.1 MGP_129S1SvImJ_G0039188.1 mouse_genomes_project 4 55684588 55684714 + Gm22300 snoRNA snoRNA MGP_129S1SvImJ_T0004505.1 MGP_129S1SvImJ_G0003921.1 mouse_genomes_project 4 99338366 99340245 + Gm12705 antisense antisense MGP_129S1SvImJ_T0010624.1 MGP_129S1SvImJ_G0008740.1 mouse_genomes_project 4 98826882 98826978 + Gm26154 miRNA miRNA MGP_129S1SvImJ_T0018079.1 MGP_129S1SvImJ_G0015544.1 mouse_genomes_project 4 44014026 44015873 - Gm12409 processed_transcript processed_transcript MGP_129S1SvImJ_T0069021.1 MGP_129S1SvImJ_G0029047.1 mouse_genomes_project 4 144477048 144481533 + MGP_129S1SvImJ_P0069021 Hspb7 protein_coding protein_coding MGP_129S1SvImJ_T0018107.1 MGP_129S1SvImJ_G0015565.1 mouse_genomes_project 4 109342064 109371384 - Gm12743 processed_transcript processed_transcript MGP_129S1SvImJ_T0014803.1 MGP_129S1SvImJ_G0012892.1 mouse_genomes_project 4 134381316 134381637 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007971.1 MGP_129S1SvImJ_G0006514.1 mouse_genomes_project 4 130902820 130910921 - 1700086P04Rik lincRNA lincRNA MGP_129S1SvImJ_T0066445.1 MGP_129S1SvImJ_G0028477.1 mouse_genomes_project 4 99135546 99342849 - MGP_129S1SvImJ_P0066445 Dock7 protein_coding protein_coding MGP_129S1SvImJ_T0066446.1 MGP_129S1SvImJ_G0028477.1 mouse_genomes_project 4 99135729 99154120 - Dock7 protein_coding processed_transcript MGP_129S1SvImJ_T0066447.1 MGP_129S1SvImJ_G0028477.1 mouse_genomes_project 4 99135730 99342708 - MGP_129S1SvImJ_P0066447 Dock7 protein_coding protein_coding MGP_129S1SvImJ_T0066448.1 MGP_129S1SvImJ_G0028477.1 mouse_genomes_project 4 99135732 99231238 - MGP_129S1SvImJ_P0066448 Dock7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066449.1 MGP_129S1SvImJ_G0028477.1 mouse_genomes_project 4 99135732 99342708 - MGP_129S1SvImJ_P0066449 Dock7 protein_coding protein_coding MGP_129S1SvImJ_T0066450.1 MGP_129S1SvImJ_G0028477.1 mouse_genomes_project 4 99136133 99342708 - MGP_129S1SvImJ_P0066450 Dock7 protein_coding protein_coding MGP_129S1SvImJ_T0066451.1 MGP_129S1SvImJ_G0028477.1 mouse_genomes_project 4 99145933 99146886 - Dock7 protein_coding retained_intron MGP_129S1SvImJ_T0066452.1 MGP_129S1SvImJ_G0028477.1 mouse_genomes_project 4 99145936 99150067 - Dock7 protein_coding retained_intron MGP_129S1SvImJ_T0066453.1 MGP_129S1SvImJ_G0028477.1 mouse_genomes_project 4 99146338 99156525 - Dock7 protein_coding processed_transcript MGP_129S1SvImJ_T0066454.1 MGP_129S1SvImJ_G0028477.1 mouse_genomes_project 4 99147243 99159990 - MGP_129S1SvImJ_P0066454 Dock7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066455.1 MGP_129S1SvImJ_G0028477.1 mouse_genomes_project 4 99156890 99164385 - Dock7 protein_coding retained_intron MGP_129S1SvImJ_T0066456.1 MGP_129S1SvImJ_G0028477.1 mouse_genomes_project 4 99160859 99162525 - Dock7 protein_coding processed_transcript MGP_129S1SvImJ_T0066457.1 MGP_129S1SvImJ_G0028477.1 mouse_genomes_project 4 99197011 99217256 - MGP_129S1SvImJ_P0066457 Dock7 protein_coding protein_coding MGP_129S1SvImJ_T0066458.1 MGP_129S1SvImJ_G0028477.1 mouse_genomes_project 4 99199102 99217221 - MGP_129S1SvImJ_P0066458 Dock7 protein_coding protein_coding MGP_129S1SvImJ_T0066459.1 MGP_129S1SvImJ_G0028477.1 mouse_genomes_project 4 99200333 99202660 - Dock7 protein_coding retained_intron MGP_129S1SvImJ_T0066460.1 MGP_129S1SvImJ_G0028477.1 mouse_genomes_project 4 99209552 99216431 - Dock7 protein_coding processed_transcript MGP_129S1SvImJ_T0066461.1 MGP_129S1SvImJ_G0028477.1 mouse_genomes_project 4 99215891 99264175 - MGP_129S1SvImJ_P0066461 Dock7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066465.1 MGP_129S1SvImJ_G0028477.1 mouse_genomes_project 4 99272581 99279950 - Dock7 protein_coding retained_intron MGP_129S1SvImJ_T0101104.1 MGP_129S1SvImJ_G0039171.1 mouse_genomes_project 4 39143434 39143515 - Gm24837 snoRNA snoRNA MGP_129S1SvImJ_T0102528.1 MGP_129S1SvImJ_G0040361.1 mouse_genomes_project 4 96294799 96294972 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0011583.1 MGP_129S1SvImJ_G0009699.1 mouse_genomes_project 4 44400075 44400342 + Gm23250 misc_RNA misc_RNA MGP_129S1SvImJ_T0066303.1 MGP_129S1SvImJ_G0028443.1 mouse_genomes_project 4 89639391 89657716 + Dmrta1 protein_coding processed_transcript MGP_129S1SvImJ_T0066304.1 MGP_129S1SvImJ_G0028443.1 mouse_genomes_project 4 89654010 89660562 + MGP_129S1SvImJ_P0066304 Dmrta1 protein_coding protein_coding MGP_129S1SvImJ_T0065443.1 MGP_129S1SvImJ_G0028228.1 mouse_genomes_project 4 42008241 42078020 + Reck protein_coding processed_transcript MGP_129S1SvImJ_T0065444.1 MGP_129S1SvImJ_G0028228.1 mouse_genomes_project 4 42008241 42078081 + MGP_129S1SvImJ_P0065444 Reck protein_coding protein_coding MGP_129S1SvImJ_T0065445.1 MGP_129S1SvImJ_G0028228.1 mouse_genomes_project 4 42073682 42075657 + Reck protein_coding processed_transcript MGP_129S1SvImJ_T0099879.1 MGP_129S1SvImJ_G0037946.1 mouse_genomes_project 4 136094970 136095123 - Gm25270 snRNA snRNA MGP_129S1SvImJ_T0065346.1 MGP_129S1SvImJ_G0028207.1 mouse_genomes_project 4 41595041 41596697 - MGP_129S1SvImJ_P0065346 Sit1 protein_coding protein_coding MGP_129S1SvImJ_T0065347.1 MGP_129S1SvImJ_G0028207.1 mouse_genomes_project 4 41595149 41596185 - Sit1 protein_coding processed_transcript MGP_129S1SvImJ_T0064588.1 MGP_129S1SvImJ_G0028028.1 mouse_genomes_project 4 498097 512279 - MGP_129S1SvImJ_P0064588 Sdr16c5 protein_coding protein_coding MGP_129S1SvImJ_T0064589.1 MGP_129S1SvImJ_G0028028.1 mouse_genomes_project 4 504956 509237 - Sdr16c5 protein_coding processed_transcript MGP_129S1SvImJ_T0010661.1 MGP_129S1SvImJ_G0008777.1 mouse_genomes_project 4 141054245 141054355 - Gm27646 miRNA miRNA MGP_129S1SvImJ_T0066290.1 MGP_129S1SvImJ_G0028432.1 mouse_genomes_project 4 88585589 88589813 - MGP_129S1SvImJ_P0066290 Klhl9 protein_coding protein_coding MGP_129S1SvImJ_T0018071.1 MGP_129S1SvImJ_G0015539.1 mouse_genomes_project 4 30818192 30826567 - Gm11934 processed_transcript processed_transcript MGP_129S1SvImJ_T0014785.1 MGP_129S1SvImJ_G0012874.1 mouse_genomes_project 4 126265600 126266239 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014580.1 MGP_129S1SvImJ_G0012669.1 mouse_genomes_project 4 53987413 53987649 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066469.1 MGP_129S1SvImJ_G0028480.1 mouse_genomes_project 4 99526190 99527611 + MGP_129S1SvImJ_P0066469 Gm12689 protein_coding protein_coding MGP_129S1SvImJ_T0018129.1 MGP_129S1SvImJ_G0015577.1 mouse_genomes_project 4 128760949 128764227 + Gm12940 processed_transcript processed_transcript MGP_129S1SvImJ_T0018130.1 MGP_129S1SvImJ_G0015577.1 mouse_genomes_project 4 128762666 128764227 + Gm12940 processed_transcript processed_transcript MGP_129S1SvImJ_T0018131.1 MGP_129S1SvImJ_G0015577.1 mouse_genomes_project 4 128762894 128776796 + Gm12940 processed_transcript processed_transcript MGP_129S1SvImJ_T0018132.1 MGP_129S1SvImJ_G0015577.1 mouse_genomes_project 4 128762995 128764165 + Gm12940 processed_transcript processed_transcript MGP_129S1SvImJ_T0101094.1 MGP_129S1SvImJ_G0039161.1 mouse_genomes_project 4 18361579 18361664 + Gm25977 snoRNA snoRNA MGP_129S1SvImJ_T0067914.1 MGP_129S1SvImJ_G0028806.1 mouse_genomes_project 4 130581898 130597503 + MGP_129S1SvImJ_P0067914 A3galt2 protein_coding protein_coding MGP_129S1SvImJ_T0067915.1 MGP_129S1SvImJ_G0028806.1 mouse_genomes_project 4 130585792 130598213 + MGP_129S1SvImJ_P0067915 A3galt2 protein_coding protein_coding MGP_129S1SvImJ_T0066613.1 MGP_129S1SvImJ_G0028510.1 mouse_genomes_project 4 105286800 105326668 + MGP_129S1SvImJ_P0066613 C8b protein_coding protein_coding MGP_129S1SvImJ_T0066614.1 MGP_129S1SvImJ_G0028510.1 mouse_genomes_project 4 105286873 105325457 + MGP_129S1SvImJ_P0066614 C8b protein_coding protein_coding MGP_129S1SvImJ_T0066615.1 MGP_129S1SvImJ_G0028510.1 mouse_genomes_project 4 105320493 105325826 + C8b protein_coding processed_transcript MGP_129S1SvImJ_T0007935.1 MGP_129S1SvImJ_G0006488.1 mouse_genomes_project 4 108477080 108484257 + 4933424M12Rik lincRNA lincRNA MGP_129S1SvImJ_T0007936.1 MGP_129S1SvImJ_G0006488.1 mouse_genomes_project 4 108482184 108484257 + 4933424M12Rik lincRNA lincRNA MGP_129S1SvImJ_T0014731.1 MGP_129S1SvImJ_G0012820.1 mouse_genomes_project 4 110540127 110540531 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014416.1 MGP_129S1SvImJ_G0012505.1 mouse_genomes_project 4 7082209 7084098 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014423.1 MGP_129S1SvImJ_G0012512.1 mouse_genomes_project 4 8079093 8079508 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067981.1 MGP_129S1SvImJ_G0028819.1 mouse_genomes_project 4 131204398 131237277 - MGP_129S1SvImJ_P0067981 Rbbp4 protein_coding protein_coding MGP_129S1SvImJ_T0067982.1 MGP_129S1SvImJ_G0028819.1 mouse_genomes_project 4 131206813 131236552 - Rbbp4 protein_coding processed_transcript MGP_129S1SvImJ_T0067983.1 MGP_129S1SvImJ_G0028819.1 mouse_genomes_project 4 131226754 131237156 - Rbbp4 protein_coding retained_intron MGP_129S1SvImJ_T0067984.1 MGP_129S1SvImJ_G0028819.1 mouse_genomes_project 4 131230568 131236990 - MGP_129S1SvImJ_P0067984 Rbbp4 protein_coding protein_coding MGP_129S1SvImJ_T0099835.1 MGP_129S1SvImJ_G0037902.1 mouse_genomes_project 4 62585066 62585173 - Gm24448 snRNA snRNA MGP_129S1SvImJ_T0065874.1 MGP_129S1SvImJ_G0028330.1 mouse_genomes_project 4 57869560 57895221 + MGP_129S1SvImJ_P0065874 Dnajc25 protein_coding protein_coding MGP_129S1SvImJ_T0065875.1 MGP_129S1SvImJ_G0028330.1 mouse_genomes_project 4 57878337 57898693 + MGP_129S1SvImJ_P0065875 Dnajc25 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065876.1 MGP_129S1SvImJ_G0028330.1 mouse_genomes_project 4 57878348 57898693 + MGP_129S1SvImJ_P0065876 Dnajc25 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065878.1 MGP_129S1SvImJ_G0028330.1 mouse_genomes_project 4 57878386 57897692 + MGP_129S1SvImJ_P0065878 Dnajc25 protein_coding protein_coding MGP_129S1SvImJ_T0014778.1 MGP_129S1SvImJ_G0012867.1 mouse_genomes_project 4 124707078 124707651 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004624.1 MGP_129S1SvImJ_G0004014.1 mouse_genomes_project 4 158340194 158345069 + Trp73os antisense antisense MGP_129S1SvImJ_T0064823.1 MGP_129S1SvImJ_G0028090.1 mouse_genomes_project 4 18745368 18769188 + MGP_129S1SvImJ_P0064823 Ccnc protein_coding protein_coding MGP_129S1SvImJ_T0064824.1 MGP_129S1SvImJ_G0028090.1 mouse_genomes_project 4 18745393 18769188 + MGP_129S1SvImJ_P0064824 Ccnc protein_coding protein_coding MGP_129S1SvImJ_T0064825.1 MGP_129S1SvImJ_G0028090.1 mouse_genomes_project 4 18745393 18780069 + MGP_129S1SvImJ_P0064825 Ccnc protein_coding protein_coding MGP_129S1SvImJ_T0064826.1 MGP_129S1SvImJ_G0028090.1 mouse_genomes_project 4 18745408 18756141 + Ccnc protein_coding processed_transcript MGP_129S1SvImJ_T0064827.1 MGP_129S1SvImJ_G0028090.1 mouse_genomes_project 4 18745420 18766604 + Ccnc protein_coding processed_transcript MGP_129S1SvImJ_T0064828.1 MGP_129S1SvImJ_G0028090.1 mouse_genomes_project 4 18745422 18766604 + MGP_129S1SvImJ_P0064828 Ccnc protein_coding protein_coding MGP_129S1SvImJ_T0064829.1 MGP_129S1SvImJ_G0028090.1 mouse_genomes_project 4 18745425 18750212 + Ccnc protein_coding processed_transcript MGP_129S1SvImJ_T0064830.1 MGP_129S1SvImJ_G0028090.1 mouse_genomes_project 4 18745434 18767196 + Ccnc protein_coding processed_transcript MGP_129S1SvImJ_T0068520.1 MGP_129S1SvImJ_G0028928.1 mouse_genomes_project 4 136858140 136870259 + MGP_129S1SvImJ_P0068520 Paqr7 protein_coding protein_coding MGP_129S1SvImJ_T0068521.1 MGP_129S1SvImJ_G0028928.1 mouse_genomes_project 4 136858418 136868652 + MGP_129S1SvImJ_P0068521 Paqr7 protein_coding protein_coding MGP_129S1SvImJ_T0068522.1 MGP_129S1SvImJ_G0028928.1 mouse_genomes_project 4 136858418 136868983 + MGP_129S1SvImJ_P0068522 Paqr7 protein_coding protein_coding MGP_129S1SvImJ_T0068523.1 MGP_129S1SvImJ_G0028928.1 mouse_genomes_project 4 136858424 136868712 + MGP_129S1SvImJ_P0068523 Paqr7 protein_coding protein_coding MGP_129S1SvImJ_T0068524.1 MGP_129S1SvImJ_G0028928.1 mouse_genomes_project 4 136858447 136871641 + MGP_129S1SvImJ_P0068524 Paqr7 protein_coding protein_coding MGP_129S1SvImJ_T0068525.1 MGP_129S1SvImJ_G0028928.1 mouse_genomes_project 4 136858484 136868432 + Paqr7 protein_coding processed_transcript MGP_129S1SvImJ_T0010605.1 MGP_129S1SvImJ_G0008721.1 mouse_genomes_project 4 42382203 42382276 - Mir5106 miRNA miRNA MGP_129S1SvImJ_T0067902.1 MGP_129S1SvImJ_G0028805.1 mouse_genomes_project 4 130474305 130577585 + MGP_129S1SvImJ_P0067902 Phc2 protein_coding protein_coding MGP_129S1SvImJ_T0067903.1 MGP_129S1SvImJ_G0028805.1 mouse_genomes_project 4 130474341 130533882 + MGP_129S1SvImJ_P0067903 Phc2 protein_coding protein_coding MGP_129S1SvImJ_T0067904.1 MGP_129S1SvImJ_G0028805.1 mouse_genomes_project 4 130509244 130527333 + Phc2 protein_coding retained_intron MGP_129S1SvImJ_T0067905.1 MGP_129S1SvImJ_G0028805.1 mouse_genomes_project 4 130509301 130577585 + MGP_129S1SvImJ_P0067905 Phc2 protein_coding protein_coding MGP_129S1SvImJ_T0067906.1 MGP_129S1SvImJ_G0028805.1 mouse_genomes_project 4 130531851 130546279 + Phc2 protein_coding retained_intron MGP_129S1SvImJ_T0067907.1 MGP_129S1SvImJ_G0028805.1 mouse_genomes_project 4 130549437 130577585 + MGP_129S1SvImJ_P0067907 Phc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067908.1 MGP_129S1SvImJ_G0028805.1 mouse_genomes_project 4 130549441 130577585 + MGP_129S1SvImJ_P0067908 Phc2 protein_coding protein_coding MGP_129S1SvImJ_T0067909.1 MGP_129S1SvImJ_G0028805.1 mouse_genomes_project 4 130549538 130572921 + MGP_129S1SvImJ_P0067909 Phc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067910.1 MGP_129S1SvImJ_G0028805.1 mouse_genomes_project 4 130549566 130569712 + MGP_129S1SvImJ_P0067910 Phc2 protein_coding protein_coding MGP_129S1SvImJ_T0067911.1 MGP_129S1SvImJ_G0028805.1 mouse_genomes_project 4 130549789 130572778 + MGP_129S1SvImJ_P0067911 Phc2 protein_coding protein_coding MGP_129S1SvImJ_T0067912.1 MGP_129S1SvImJ_G0028805.1 mouse_genomes_project 4 130549827 130568175 + MGP_129S1SvImJ_P0067912 Phc2 protein_coding protein_coding MGP_129S1SvImJ_T0067913.1 MGP_129S1SvImJ_G0028805.1 mouse_genomes_project 4 130549838 130571836 + MGP_129S1SvImJ_P0067913 Phc2 protein_coding protein_coding MGP_129S1SvImJ_T0014635.1 MGP_129S1SvImJ_G0012724.1 mouse_genomes_project 4 76176076 76177113 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007866.1 MGP_129S1SvImJ_G0006433.1 mouse_genomes_project 4 54974824 54978688 - 2310081O03Rik lincRNA lincRNA MGP_129S1SvImJ_T0014703.1 MGP_129S1SvImJ_G0012792.1 mouse_genomes_project 4 101724626 101775598 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099854.1 MGP_129S1SvImJ_G0037921.1 mouse_genomes_project 4 109205706 109205813 - Gm24967 snRNA snRNA MGP_129S1SvImJ_T0014614.1 MGP_129S1SvImJ_G0012703.1 mouse_genomes_project 4 71091700 71092682 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010617.1 MGP_129S1SvImJ_G0008733.1 mouse_genomes_project 4 81599658 81599768 - Gm22402 miRNA miRNA MGP_129S1SvImJ_T0014848.1 MGP_129S1SvImJ_G0012937.1 mouse_genomes_project 4 152900815 152901135 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014494.1 MGP_129S1SvImJ_G0012583.1 mouse_genomes_project 4 26500211 26500932 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004569.1 MGP_129S1SvImJ_G0003971.1 mouse_genomes_project 4 136805025 136808306 - antisense antisense MGP_129S1SvImJ_T0066747.1 MGP_129S1SvImJ_G0028539.1 mouse_genomes_project 4 108059700 108108167 + MGP_129S1SvImJ_P0066747 Ndc1 protein_coding protein_coding MGP_129S1SvImJ_T0066748.1 MGP_129S1SvImJ_G0028539.1 mouse_genomes_project 4 108059796 108106154 + MGP_129S1SvImJ_P0066748 Ndc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066749.1 MGP_129S1SvImJ_G0028539.1 mouse_genomes_project 4 108059831 108108144 + MGP_129S1SvImJ_P0066749 Ndc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066750.1 MGP_129S1SvImJ_G0028539.1 mouse_genomes_project 4 108059968 108102971 + MGP_129S1SvImJ_P0066750 Ndc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066751.1 MGP_129S1SvImJ_G0028539.1 mouse_genomes_project 4 108072624 108079171 + Ndc1 protein_coding processed_transcript MGP_129S1SvImJ_T0066752.1 MGP_129S1SvImJ_G0028539.1 mouse_genomes_project 4 108073001 108082783 + Ndc1 protein_coding retained_intron MGP_129S1SvImJ_T0069013.1 MGP_129S1SvImJ_G0029045.1 mouse_genomes_project 4 144439726 144454550 - MGP_129S1SvImJ_P0069013 Clcnka protein_coding protein_coding MGP_129S1SvImJ_T0069014.1 MGP_129S1SvImJ_G0029045.1 mouse_genomes_project 4 144439726 144455070 - MGP_129S1SvImJ_P0069014 Clcnka protein_coding protein_coding MGP_129S1SvImJ_T0069015.1 MGP_129S1SvImJ_G0029045.1 mouse_genomes_project 4 144447930 144451241 - Clcnka protein_coding retained_intron MGP_129S1SvImJ_T0069016.1 MGP_129S1SvImJ_G0029045.1 mouse_genomes_project 4 144451533 144454920 - MGP_129S1SvImJ_P0069016 Clcnka protein_coding protein_coding MGP_129S1SvImJ_T0067412.1 MGP_129S1SvImJ_G0028672.1 mouse_genomes_project 4 119602630 119605418 - MGP_129S1SvImJ_P0067412 Tmem125 protein_coding protein_coding MGP_129S1SvImJ_T0067413.1 MGP_129S1SvImJ_G0028672.1 mouse_genomes_project 4 119603548 119605734 - MGP_129S1SvImJ_P0067413 Tmem125 protein_coding protein_coding MGP_129S1SvImJ_T0067414.1 MGP_129S1SvImJ_G0028672.1 mouse_genomes_project 4 119603706 119604652 - MGP_129S1SvImJ_P0067414 Tmem125 protein_coding protein_coding MGP_129S1SvImJ_T0067415.1 MGP_129S1SvImJ_G0028672.1 mouse_genomes_project 4 119603756 119604979 - MGP_129S1SvImJ_P0067415 Tmem125 protein_coding protein_coding MGP_129S1SvImJ_T0067416.1 MGP_129S1SvImJ_G0028672.1 mouse_genomes_project 4 119604291 119604939 - Tmem125 protein_coding processed_transcript MGP_129S1SvImJ_T0014758.1 MGP_129S1SvImJ_G0012847.1 mouse_genomes_project 4 119581263 119581855 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014675.1 MGP_129S1SvImJ_G0012764.1 mouse_genomes_project 4 93098837 93101767 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018146.1 MGP_129S1SvImJ_G0015586.1 mouse_genomes_project 4 159722741 159746977 - 5830444B04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018147.1 MGP_129S1SvImJ_G0015586.1 mouse_genomes_project 4 159732502 159740570 - 5830444B04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018148.1 MGP_129S1SvImJ_G0015586.1 mouse_genomes_project 4 159732503 159746968 - 5830444B04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018149.1 MGP_129S1SvImJ_G0015586.1 mouse_genomes_project 4 159733711 159740549 - 5830444B04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018080.1 MGP_129S1SvImJ_G0015545.1 mouse_genomes_project 4 44854742 44858628 + Gm16731 processed_transcript processed_transcript MGP_129S1SvImJ_T0102537.1 MGP_129S1SvImJ_G0040370.1 mouse_genomes_project 4 116258289 116277814 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0098753.1 MGP_129S1SvImJ_G0036838.1 mouse_genomes_project 4 86349029 86349160 - Scarna8 scaRNA scaRNA MGP_129S1SvImJ_T0004449.1 MGP_129S1SvImJ_G0003880.1 mouse_genomes_project 4 21911517 21919135 + Gm11899 antisense antisense MGP_129S1SvImJ_T0101103.1 MGP_129S1SvImJ_G0039170.1 mouse_genomes_project 4 39134988 39135065 - Gm22888 snoRNA snoRNA MGP_129S1SvImJ_T0014847.1 MGP_129S1SvImJ_G0012936.1 mouse_genomes_project 4 152306413 152307234 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069805.1 MGP_129S1SvImJ_G0029221.1 mouse_genomes_project 4 160004070 160007373 - Mib2 protein_coding processed_transcript MGP_129S1SvImJ_T0069806.1 MGP_129S1SvImJ_G0029221.1 mouse_genomes_project 4 160004075 160017503 - Mib2 protein_coding processed_transcript MGP_129S1SvImJ_T0069807.1 MGP_129S1SvImJ_G0029221.1 mouse_genomes_project 4 160004075 160024300 - MGP_129S1SvImJ_P0069807 Mib2 protein_coding protein_coding MGP_129S1SvImJ_T0069808.1 MGP_129S1SvImJ_G0029221.1 mouse_genomes_project 4 160004076 160006121 - Mib2 protein_coding processed_transcript MGP_129S1SvImJ_T0069809.1 MGP_129S1SvImJ_G0029221.1 mouse_genomes_project 4 160005231 160006121 - Mib2 protein_coding processed_transcript MGP_129S1SvImJ_T0069810.1 MGP_129S1SvImJ_G0029221.1 mouse_genomes_project 4 160006336 160008977 - MGP_129S1SvImJ_P0069810 Mib2 protein_coding protein_coding MGP_129S1SvImJ_T0069811.1 MGP_129S1SvImJ_G0029221.1 mouse_genomes_project 4 160007017 160007733 - Mib2 protein_coding processed_transcript MGP_129S1SvImJ_T0069812.1 MGP_129S1SvImJ_G0029221.1 mouse_genomes_project 4 160010713 160024299 - Mib2 protein_coding processed_transcript MGP_129S1SvImJ_T0069813.1 MGP_129S1SvImJ_G0029221.1 mouse_genomes_project 4 160017440 160024295 - Mib2 protein_coding processed_transcript MGP_129S1SvImJ_T0068410.1 MGP_129S1SvImJ_G0028906.1 mouse_genomes_project 4 136277492 136280713 - MGP_129S1SvImJ_P0068410 protein_coding protein_coding MGP_129S1SvImJ_T0068411.1 MGP_129S1SvImJ_G0028906.1 mouse_genomes_project 4 136277589 136279959 - protein_coding retained_intron MGP_129S1SvImJ_T0068412.1 MGP_129S1SvImJ_G0028906.1 mouse_genomes_project 4 136277589 136279329 - protein_coding processed_transcript MGP_129S1SvImJ_T0068413.1 MGP_129S1SvImJ_G0028906.1 mouse_genomes_project 4 136277589 136279305 - protein_coding processed_transcript MGP_129S1SvImJ_T0068414.1 MGP_129S1SvImJ_G0028906.1 mouse_genomes_project 4 136277589 136280713 - protein_coding processed_transcript MGP_129S1SvImJ_T0068415.1 MGP_129S1SvImJ_G0028906.1 mouse_genomes_project 4 136277589 136279944 - MGP_129S1SvImJ_P0068415 protein_coding protein_coding MGP_129S1SvImJ_T0068416.1 MGP_129S1SvImJ_G0028906.1 mouse_genomes_project 4 136277643 136279941 - protein_coding retained_intron MGP_129S1SvImJ_T0068417.1 MGP_129S1SvImJ_G0028906.1 mouse_genomes_project 4 136277653 136279911 - protein_coding retained_intron MGP_129S1SvImJ_T0066287.1 MGP_129S1SvImJ_G0028429.1 mouse_genomes_project 4 88538400 88538970 - MGP_129S1SvImJ_P0066287 protein_coding protein_coding MGP_129S1SvImJ_T0099877.1 MGP_129S1SvImJ_G0037944.1 mouse_genomes_project 4 134715087 134715191 - Gm24762 snRNA snRNA MGP_129S1SvImJ_T0008026.1 MGP_129S1SvImJ_G0006552.1 mouse_genomes_project 4 144317237 144318465 + Gm13056 lincRNA lincRNA MGP_129S1SvImJ_T0004619.1 MGP_129S1SvImJ_G0004009.1 mouse_genomes_project 4 154539177 154540864 - Gm13091 antisense antisense MGP_129S1SvImJ_T0067574.1 MGP_129S1SvImJ_G0028716.1 mouse_genomes_project 4 122221394 122222223 - MGP_129S1SvImJ_P0067574 Exo5 protein_coding protein_coding MGP_129S1SvImJ_T0067575.1 MGP_129S1SvImJ_G0028716.1 mouse_genomes_project 4 122221394 122227137 - MGP_129S1SvImJ_P0067575 Exo5 protein_coding protein_coding MGP_129S1SvImJ_T0067576.1 MGP_129S1SvImJ_G0028716.1 mouse_genomes_project 4 122221400 122227137 - MGP_129S1SvImJ_P0067576 Exo5 protein_coding protein_coding MGP_129S1SvImJ_T0067577.1 MGP_129S1SvImJ_G0028716.1 mouse_genomes_project 4 122222467 122227149 - MGP_129S1SvImJ_P0067577 Exo5 protein_coding protein_coding MGP_129S1SvImJ_T0004470.1 MGP_129S1SvImJ_G0003897.1 mouse_genomes_project 4 43462398 43471661 - Frmpd1os antisense antisense MGP_129S1SvImJ_T0014412.1 MGP_129S1SvImJ_G0012501.1 mouse_genomes_project 4 5253513 5254463 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069381.1 MGP_129S1SvImJ_G0029147.1 mouse_genomes_project 4 153809736 153873930 - MGP_129S1SvImJ_P0069381 Spsb1 protein_coding protein_coding MGP_129S1SvImJ_T0069382.1 MGP_129S1SvImJ_G0029147.1 mouse_genomes_project 4 153811419 153823145 - MGP_129S1SvImJ_P0069382 Spsb1 protein_coding protein_coding MGP_129S1SvImJ_T0069383.1 MGP_129S1SvImJ_G0029147.1 mouse_genomes_project 4 153811666 153820620 - MGP_129S1SvImJ_P0069383 Spsb1 protein_coding protein_coding MGP_129S1SvImJ_T0069384.1 MGP_129S1SvImJ_G0029147.1 mouse_genomes_project 4 153819837 153872691 - MGP_129S1SvImJ_P0069384 Spsb1 protein_coding protein_coding MGP_129S1SvImJ_T0069385.1 MGP_129S1SvImJ_G0029147.1 mouse_genomes_project 4 153820321 153835726 - MGP_129S1SvImJ_P0069385 Spsb1 protein_coding protein_coding MGP_129S1SvImJ_T0069386.1 MGP_129S1SvImJ_G0029147.1 mouse_genomes_project 4 153820325 153849171 - MGP_129S1SvImJ_P0069386 Spsb1 protein_coding protein_coding MGP_129S1SvImJ_T0069387.1 MGP_129S1SvImJ_G0029147.1 mouse_genomes_project 4 153820330 153861727 - MGP_129S1SvImJ_P0069387 Spsb1 protein_coding protein_coding MGP_129S1SvImJ_T0069388.1 MGP_129S1SvImJ_G0029147.1 mouse_genomes_project 4 153820379 153865211 - MGP_129S1SvImJ_P0069388 Spsb1 protein_coding protein_coding MGP_129S1SvImJ_T0069389.1 MGP_129S1SvImJ_G0029147.1 mouse_genomes_project 4 153820472 153873930 - Spsb1 protein_coding processed_transcript MGP_129S1SvImJ_T0069390.1 MGP_129S1SvImJ_G0029147.1 mouse_genomes_project 4 153822893 153873918 - Spsb1 protein_coding processed_transcript MGP_129S1SvImJ_T0065562.1 MGP_129S1SvImJ_G0028247.1 mouse_genomes_project 4 44064252 44083849 - MGP_129S1SvImJ_P0065562 Igfbpl1 protein_coding protein_coding MGP_129S1SvImJ_T0065563.1 MGP_129S1SvImJ_G0028247.1 mouse_genomes_project 4 44069113 44072470 - Igfbpl1 protein_coding processed_transcript MGP_129S1SvImJ_T0014666.1 MGP_129S1SvImJ_G0012755.1 mouse_genomes_project 4 90350721 90351713 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069029.1 MGP_129S1SvImJ_G0029049.1 mouse_genomes_project 4 144528822 144609386 - MGP_129S1SvImJ_P0069029 Spen protein_coding protein_coding MGP_129S1SvImJ_T0069030.1 MGP_129S1SvImJ_G0029049.1 mouse_genomes_project 4 144528822 144609238 - MGP_129S1SvImJ_P0069030 Spen protein_coding protein_coding MGP_129S1SvImJ_T0069031.1 MGP_129S1SvImJ_G0029049.1 mouse_genomes_project 4 144529381 144532414 - Spen protein_coding processed_transcript MGP_129S1SvImJ_T0069032.1 MGP_129S1SvImJ_G0029049.1 mouse_genomes_project 4 144547495 144551201 - Spen protein_coding processed_transcript MGP_129S1SvImJ_T0069033.1 MGP_129S1SvImJ_G0029049.1 mouse_genomes_project 4 144558438 144582592 - Spen protein_coding processed_transcript MGP_129S1SvImJ_T0069034.1 MGP_129S1SvImJ_G0029049.1 mouse_genomes_project 4 144588340 144609042 - Spen protein_coding processed_transcript MGP_129S1SvImJ_T0068255.1 MGP_129S1SvImJ_G0028869.1 mouse_genomes_project 4 134474611 134488441 - MGP_129S1SvImJ_P0068255 Rcc1 protein_coding protein_coding MGP_129S1SvImJ_T0068256.1 MGP_129S1SvImJ_G0028869.1 mouse_genomes_project 4 134474615 134488399 - MGP_129S1SvImJ_P0068256 Rcc1 protein_coding protein_coding MGP_129S1SvImJ_T0068257.1 MGP_129S1SvImJ_G0028869.1 mouse_genomes_project 4 134474615 134497373 - MGP_129S1SvImJ_P0068257 Rcc1 protein_coding protein_coding MGP_129S1SvImJ_T0068258.1 MGP_129S1SvImJ_G0028869.1 mouse_genomes_project 4 134480350 134482627 - Rcc1 protein_coding processed_transcript MGP_129S1SvImJ_T0068259.1 MGP_129S1SvImJ_G0028869.1 mouse_genomes_project 4 134480517 134499495 - MGP_129S1SvImJ_P0068259 Rcc1 protein_coding protein_coding MGP_129S1SvImJ_T0068260.1 MGP_129S1SvImJ_G0028869.1 mouse_genomes_project 4 134481409 134488395 - Rcc1 protein_coding retained_intron MGP_129S1SvImJ_T0068261.1 MGP_129S1SvImJ_G0028869.1 mouse_genomes_project 4 134481655 134488051 - Rcc1 protein_coding retained_intron MGP_129S1SvImJ_T0068262.1 MGP_129S1SvImJ_G0028869.1 mouse_genomes_project 4 134482186 134488386 - Rcc1 protein_coding retained_intron MGP_129S1SvImJ_T0066395.1 MGP_129S1SvImJ_G0028467.1 mouse_genomes_project 4 96822178 96890455 - MGP_129S1SvImJ_P0066395 Gm12695 protein_coding protein_coding MGP_129S1SvImJ_T0001444.1 MGP_129S1SvImJ_G0001366.1 mouse_genomes_project 4 137891692 137892022 + TEC TEC MGP_129S1SvImJ_T0018141.1 MGP_129S1SvImJ_G0015581.1 mouse_genomes_project 4 143792223 143798781 + Gm13032 processed_transcript processed_transcript MGP_129S1SvImJ_T0099858.1 MGP_129S1SvImJ_G0037925.1 mouse_genomes_project 4 109760788 109760893 - Gm23589 snRNA snRNA MGP_129S1SvImJ_T0001450.1 MGP_129S1SvImJ_G0001371.1 mouse_genomes_project 4 148324698 148326392 - TEC TEC MGP_129S1SvImJ_T0065061.1 MGP_129S1SvImJ_G0028145.1 mouse_genomes_project 4 38559044 38582271 - MGP_129S1SvImJ_P0065061 Aptx protein_coding protein_coding MGP_129S1SvImJ_T0065062.1 MGP_129S1SvImJ_G0028145.1 mouse_genomes_project 4 38559044 38582586 - MGP_129S1SvImJ_P0065062 Aptx protein_coding protein_coding MGP_129S1SvImJ_T0065063.1 MGP_129S1SvImJ_G0028145.1 mouse_genomes_project 4 38561586 38582554 - MGP_129S1SvImJ_P0065063 Aptx protein_coding protein_coding MGP_129S1SvImJ_T0065064.1 MGP_129S1SvImJ_G0028145.1 mouse_genomes_project 4 38563875 38582579 - MGP_129S1SvImJ_P0065064 Aptx protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065065.1 MGP_129S1SvImJ_G0028145.1 mouse_genomes_project 4 38570719 38573864 - Aptx protein_coding processed_transcript MGP_129S1SvImJ_T0065066.1 MGP_129S1SvImJ_G0028145.1 mouse_genomes_project 4 38574376 38582073 - MGP_129S1SvImJ_P0065066 Aptx protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0008039.1 MGP_129S1SvImJ_G0006565.1 mouse_genomes_project 4 156846474 156849489 + Gm833 lincRNA lincRNA MGP_129S1SvImJ_T0099812.1 MGP_129S1SvImJ_G0037879.1 mouse_genomes_project 4 14498836 14498939 - Gm23384 snRNA snRNA MGP_129S1SvImJ_T0008015.1 MGP_129S1SvImJ_G0006542.1 mouse_genomes_project 4 142208869 142212700 - 2700016F22Rik lincRNA lincRNA MGP_129S1SvImJ_T0065682.1 MGP_129S1SvImJ_G0028276.1 mouse_genomes_project 4 47012136 47094079 + MGP_129S1SvImJ_P0065682 Tmeff1 protein_coding protein_coding MGP_129S1SvImJ_T0065683.1 MGP_129S1SvImJ_G0028276.1 mouse_genomes_project 4 47012318 47093030 + MGP_129S1SvImJ_P0065683 Tmeff1 protein_coding protein_coding MGP_129S1SvImJ_T0065684.1 MGP_129S1SvImJ_G0028276.1 mouse_genomes_project 4 47012504 47093415 + MGP_129S1SvImJ_P0065684 Tmeff1 protein_coding protein_coding MGP_129S1SvImJ_T0065685.1 MGP_129S1SvImJ_G0028276.1 mouse_genomes_project 4 47065864 47091183 + MGP_129S1SvImJ_P0065685 Tmeff1 protein_coding protein_coding MGP_129S1SvImJ_T0099833.1 MGP_129S1SvImJ_G0037900.1 mouse_genomes_project 4 56688454 56688561 - Gm26138 snRNA snRNA MGP_129S1SvImJ_T0014843.1 MGP_129S1SvImJ_G0012932.1 mouse_genomes_project 4 151575628 151575961 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007958.1 MGP_129S1SvImJ_G0006506.1 mouse_genomes_project 4 126824381 126837496 + 1700041M05Rik lincRNA lincRNA MGP_129S1SvImJ_T0014615.1 MGP_129S1SvImJ_G0012704.1 mouse_genomes_project 4 71743262 71743594 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014792.1 MGP_129S1SvImJ_G0012881.1 mouse_genomes_project 4 128773780 128774000 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068536.1 MGP_129S1SvImJ_G0028932.1 mouse_genomes_project 4 136924739 137073548 - MGP_129S1SvImJ_P0068536 Man1c1 protein_coding protein_coding MGP_129S1SvImJ_T0068537.1 MGP_129S1SvImJ_G0028932.1 mouse_genomes_project 4 136924739 137073548 - MGP_129S1SvImJ_P0068537 Man1c1 protein_coding protein_coding MGP_129S1SvImJ_T0068538.1 MGP_129S1SvImJ_G0028932.1 mouse_genomes_project 4 136930928 137073025 - Man1c1 protein_coding retained_intron MGP_129S1SvImJ_T0067634.1 MGP_129S1SvImJ_G0028737.1 mouse_genomes_project 4 124628158 124642934 + MGP_129S1SvImJ_P0067634 Nt5c1a protein_coding protein_coding MGP_129S1SvImJ_T0064779.1 MGP_129S1SvImJ_G0028072.1 mouse_genomes_project 4 12773092 12802387 + MGP_129S1SvImJ_P0064779 Calb1 protein_coding protein_coding MGP_129S1SvImJ_T0064780.1 MGP_129S1SvImJ_G0028072.1 mouse_genomes_project 4 12773094 12790030 + Calb1 protein_coding retained_intron MGP_129S1SvImJ_T0064781.1 MGP_129S1SvImJ_G0028072.1 mouse_genomes_project 4 12779688 12790338 + Calb1 protein_coding retained_intron MGP_129S1SvImJ_T0008028.1 MGP_129S1SvImJ_G0006554.1 mouse_genomes_project 4 144978180 144979568 + Gm29367 lincRNA lincRNA MGP_129S1SvImJ_T0067019.1 MGP_129S1SvImJ_G0028586.1 mouse_genomes_project 4 113786128 114678730 - protein_coding retained_intron MGP_129S1SvImJ_T0018118.1 MGP_129S1SvImJ_G0015572.1 mouse_genomes_project 4 120407235 120408876 + Gm12898 processed_transcript processed_transcript MGP_129S1SvImJ_T0069939.1 MGP_129S1SvImJ_G0029248.1 mouse_genomes_project 4 160569246 160570639 - MGP_129S1SvImJ_P0069939 Isg15 protein_coding protein_coding MGP_129S1SvImJ_T0004488.1 MGP_129S1SvImJ_G0003914.1 mouse_genomes_project 4 86321077 86322431 + Saxo1os antisense antisense MGP_129S1SvImJ_T0068343.1 MGP_129S1SvImJ_G0028888.1 mouse_genomes_project 4 135447020 135454567 + Cd164l2 protein_coding processed_transcript MGP_129S1SvImJ_T0068344.1 MGP_129S1SvImJ_G0028888.1 mouse_genomes_project 4 135453607 135457336 + MGP_129S1SvImJ_P0068344 Cd164l2 protein_coding protein_coding MGP_129S1SvImJ_T0068345.1 MGP_129S1SvImJ_G0028888.1 mouse_genomes_project 4 135454244 135457336 + Cd164l2 protein_coding processed_transcript MGP_129S1SvImJ_T0068346.1 MGP_129S1SvImJ_G0028888.1 mouse_genomes_project 4 135454330 135457023 + Cd164l2 protein_coding retained_intron MGP_129S1SvImJ_T0098587.1 MGP_129S1SvImJ_G0036672.1 mouse_genomes_project 4 41825377 41825509 + Gm23257 rRNA rRNA MGP_129S1SvImJ_T0064592.1 MGP_129S1SvImJ_G0028030.1 mouse_genomes_project 4 613692 620249 - MGP_129S1SvImJ_P0064592 Penk protein_coding protein_coding MGP_129S1SvImJ_T0064593.1 MGP_129S1SvImJ_G0028030.1 mouse_genomes_project 4 613693 620591 - MGP_129S1SvImJ_P0064593 Penk protein_coding protein_coding MGP_129S1SvImJ_T0069831.1 MGP_129S1SvImJ_G0029228.1 mouse_genomes_project 4 160153462 160156196 + MGP_129S1SvImJ_P0069831 Ankrd65 protein_coding protein_coding MGP_129S1SvImJ_T0069832.1 MGP_129S1SvImJ_G0029228.1 mouse_genomes_project 4 160154195 160162381 + MGP_129S1SvImJ_P0069832 Ankrd65 protein_coding protein_coding MGP_129S1SvImJ_T0101151.1 MGP_129S1SvImJ_G0039218.1 mouse_genomes_project 4 122381211 122381336 - Gm26186 snoRNA snoRNA MGP_129S1SvImJ_T0014438.1 MGP_129S1SvImJ_G0012527.1 mouse_genomes_project 4 12911717 12913039 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067690.1 MGP_129S1SvImJ_G0028753.1 mouse_genomes_project 4 126288036 126354997 + MGP_129S1SvImJ_P0067690 Inpp5b protein_coding protein_coding MGP_129S1SvImJ_T0067691.1 MGP_129S1SvImJ_G0028753.1 mouse_genomes_project 4 126288044 126299109 + MGP_129S1SvImJ_P0067691 Inpp5b protein_coding protein_coding MGP_129S1SvImJ_T0067692.1 MGP_129S1SvImJ_G0028753.1 mouse_genomes_project 4 126288058 126354991 + MGP_129S1SvImJ_P0067692 Inpp5b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067693.1 MGP_129S1SvImJ_G0028753.1 mouse_genomes_project 4 126288064 126299071 + MGP_129S1SvImJ_P0067693 Inpp5b protein_coding protein_coding MGP_129S1SvImJ_T0067694.1 MGP_129S1SvImJ_G0028753.1 mouse_genomes_project 4 126320900 126335844 + Inpp5b protein_coding processed_transcript MGP_129S1SvImJ_T0067695.1 MGP_129S1SvImJ_G0028753.1 mouse_genomes_project 4 126321006 126335897 + Inpp5b protein_coding processed_transcript MGP_129S1SvImJ_T0067696.1 MGP_129S1SvImJ_G0028753.1 mouse_genomes_project 4 126348653 126351376 + Inpp5b protein_coding processed_transcript MGP_129S1SvImJ_T0067697.1 MGP_129S1SvImJ_G0028753.1 mouse_genomes_project 4 126353033 126354596 + Inpp5b protein_coding processed_transcript MGP_129S1SvImJ_T0068611.1 MGP_129S1SvImJ_G0028949.1 mouse_genomes_project 4 138224189 138284451 + MGP_129S1SvImJ_P0068611 Myom3 protein_coding protein_coding MGP_129S1SvImJ_T0068612.1 MGP_129S1SvImJ_G0028949.1 mouse_genomes_project 4 138263562 138284451 + Myom3 protein_coding retained_intron MGP_129S1SvImJ_T0068613.1 MGP_129S1SvImJ_G0028949.1 mouse_genomes_project 4 138268703 138273996 + Myom3 protein_coding retained_intron MGP_129S1SvImJ_T0010588.1 MGP_129S1SvImJ_G0008704.1 mouse_genomes_project 4 10378261 10378368 - Gm23162 miRNA miRNA MGP_129S1SvImJ_T0064832.1 MGP_129S1SvImJ_G0028092.1 mouse_genomes_project 4 18786545 18801634 + Usp45 protein_coding processed_transcript MGP_129S1SvImJ_T0064833.1 MGP_129S1SvImJ_G0028092.1 mouse_genomes_project 4 18795412 18803982 + Usp45 protein_coding retained_intron MGP_129S1SvImJ_T0064834.1 MGP_129S1SvImJ_G0028092.1 mouse_genomes_project 4 18795423 18859879 + MGP_129S1SvImJ_P0064834 Usp45 protein_coding protein_coding MGP_129S1SvImJ_T0064835.1 MGP_129S1SvImJ_G0028092.1 mouse_genomes_project 4 18795423 18859881 + MGP_129S1SvImJ_P0064835 Usp45 protein_coding protein_coding MGP_129S1SvImJ_T0064836.1 MGP_129S1SvImJ_G0028092.1 mouse_genomes_project 4 18795432 18820910 + MGP_129S1SvImJ_P0064836 Usp45 protein_coding protein_coding MGP_129S1SvImJ_T0064837.1 MGP_129S1SvImJ_G0028092.1 mouse_genomes_project 4 18795449 18859881 + MGP_129S1SvImJ_P0064837 Usp45 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064838.1 MGP_129S1SvImJ_G0028092.1 mouse_genomes_project 4 18800894 18859879 + MGP_129S1SvImJ_P0064838 Usp45 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064839.1 MGP_129S1SvImJ_G0028092.1 mouse_genomes_project 4 18803865 18839542 + MGP_129S1SvImJ_P0064839 Usp45 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069197.1 MGP_129S1SvImJ_G0029113.1 mouse_genomes_project 4 151689231 151690591 + MGP_129S1SvImJ_P0069197 Nppa protein_coding protein_coding MGP_129S1SvImJ_T0065936.1 MGP_129S1SvImJ_G0028351.1 mouse_genomes_project 4 61394409 61413009 + MGP_129S1SvImJ_P0065936 Prpf4 protein_coding protein_coding MGP_129S1SvImJ_T0065937.1 MGP_129S1SvImJ_G0028351.1 mouse_genomes_project 4 61407862 61409350 + Prpf4 protein_coding processed_transcript MGP_129S1SvImJ_T0007891.1 MGP_129S1SvImJ_G0006454.1 mouse_genomes_project 4 83489280 83493400 - Gm11415 lincRNA lincRNA MGP_129S1SvImJ_T0004513.1 MGP_129S1SvImJ_G0003929.1 mouse_genomes_project 4 107797581 107807360 + Gm12802 antisense antisense MGP_129S1SvImJ_T0018106.1 MGP_129S1SvImJ_G0015564.1 mouse_genomes_project 4 106842123 106898513 + Gm12724 processed_transcript processed_transcript MGP_129S1SvImJ_T0068504.1 MGP_129S1SvImJ_G0028924.1 mouse_genomes_project 4 136691025 136708680 + MGP_129S1SvImJ_P0068504 Slc30a2 protein_coding protein_coding MGP_129S1SvImJ_T0068505.1 MGP_129S1SvImJ_G0028924.1 mouse_genomes_project 4 136691131 136708531 + MGP_129S1SvImJ_P0068505 Slc30a2 protein_coding protein_coding MGP_129S1SvImJ_T0014695.1 MGP_129S1SvImJ_G0012784.1 mouse_genomes_project 4 99765424 99765839 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014690.1 MGP_129S1SvImJ_G0012779.1 mouse_genomes_project 4 98829615 98832262 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099852.1 MGP_129S1SvImJ_G0037919.1 mouse_genomes_project 4 101565454 101565618 + Gm25124 snRNA snRNA MGP_129S1SvImJ_T0014791.1 MGP_129S1SvImJ_G0012880.1 mouse_genomes_project 4 128707259 128707424 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066235.1 MGP_129S1SvImJ_G0028414.1 mouse_genomes_project 4 86526994 86605895 + MGP_129S1SvImJ_P0066235 Dennd4c protein_coding protein_coding MGP_129S1SvImJ_T0066236.1 MGP_129S1SvImJ_G0028414.1 mouse_genomes_project 4 86526994 86629252 + MGP_129S1SvImJ_P0066236 Dennd4c protein_coding protein_coding MGP_129S1SvImJ_T0066237.1 MGP_129S1SvImJ_G0028414.1 mouse_genomes_project 4 86546117 86625806 + MGP_129S1SvImJ_P0066237 Dennd4c protein_coding protein_coding MGP_129S1SvImJ_T0066238.1 MGP_129S1SvImJ_G0028414.1 mouse_genomes_project 4 86549739 86553626 + Dennd4c protein_coding processed_transcript MGP_129S1SvImJ_T0004606.1 MGP_129S1SvImJ_G0004000.1 mouse_genomes_project 4 152729024 152730447 - Gm13205 antisense antisense MGP_129S1SvImJ_T0064806.1 MGP_129S1SvImJ_G0028082.1 mouse_genomes_project 4 16638765 16685356 + MGP_129S1SvImJ_P0064806 Gm12353 protein_coding protein_coding MGP_129S1SvImJ_T0014781.1 MGP_129S1SvImJ_G0012870.1 mouse_genomes_project 4 125325016 125326415 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101163.1 MGP_129S1SvImJ_G0039230.1 mouse_genomes_project 4 134449297 134449433 + Snora16a snoRNA snoRNA MGP_129S1SvImJ_T0067241.1 MGP_129S1SvImJ_G0028640.1 mouse_genomes_project 4 117943819 117954549 + MGP_129S1SvImJ_P0067241 Hectd3 protein_coding protein_coding MGP_129S1SvImJ_T0067242.1 MGP_129S1SvImJ_G0028640.1 mouse_genomes_project 4 117946777 117949599 + Hectd3 protein_coding retained_intron MGP_129S1SvImJ_T0067243.1 MGP_129S1SvImJ_G0028640.1 mouse_genomes_project 4 117952127 117952721 + Hectd3 protein_coding retained_intron MGP_129S1SvImJ_T0066390.1 MGP_129S1SvImJ_G0028463.1 mouse_genomes_project 4 96549211 96605095 - MGP_129S1SvImJ_P0066390 Cyp2j8 protein_coding protein_coding MGP_129S1SvImJ_T0068568.1 MGP_129S1SvImJ_G0028940.1 mouse_genomes_project 4 137631000 137692955 - MGP_129S1SvImJ_P0068568 Clic4 protein_coding protein_coding MGP_129S1SvImJ_T0068569.1 MGP_129S1SvImJ_G0028940.1 mouse_genomes_project 4 137641575 137692955 - Clic4 protein_coding retained_intron MGP_129S1SvImJ_T0004542.1 MGP_129S1SvImJ_G0003951.1 mouse_genomes_project 4 124499284 124500548 - Gm12923 antisense antisense MGP_129S1SvImJ_T0102513.1 MGP_129S1SvImJ_G0040347.1 mouse_genomes_project 4 8971573 8972397 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0014687.1 MGP_129S1SvImJ_G0012776.1 mouse_genomes_project 4 98382157 98382675 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067189.1 MGP_129S1SvImJ_G0028630.1 mouse_genomes_project 4 117540485 117557107 - MGP_129S1SvImJ_P0067189 Akr1a1 protein_coding protein_coding MGP_129S1SvImJ_T0067190.1 MGP_129S1SvImJ_G0028630.1 mouse_genomes_project 4 117540486 117556823 - Akr1a1 protein_coding processed_transcript MGP_129S1SvImJ_T0067191.1 MGP_129S1SvImJ_G0028630.1 mouse_genomes_project 4 117540486 117541981 - Akr1a1 protein_coding processed_transcript MGP_129S1SvImJ_T0067192.1 MGP_129S1SvImJ_G0028630.1 mouse_genomes_project 4 117543068 117554901 - MGP_129S1SvImJ_P0067192 Akr1a1 protein_coding protein_coding MGP_129S1SvImJ_T0069594.1 MGP_129S1SvImJ_G0029184.1 mouse_genomes_project 4 157568736 157683103 - MGP_129S1SvImJ_P0069594 Ajap1 protein_coding protein_coding MGP_129S1SvImJ_T0069595.1 MGP_129S1SvImJ_G0029184.1 mouse_genomes_project 4 157569746 157682471 - MGP_129S1SvImJ_P0069595 Ajap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068049.1 MGP_129S1SvImJ_G0028832.1 mouse_genomes_project 4 131546293 131552205 - MGP_129S1SvImJ_P0068049 Dcdc2b protein_coding protein_coding MGP_129S1SvImJ_T0068050.1 MGP_129S1SvImJ_G0028832.1 mouse_genomes_project 4 131546491 131547211 - Dcdc2b protein_coding retained_intron MGP_129S1SvImJ_T0068051.1 MGP_129S1SvImJ_G0028832.1 mouse_genomes_project 4 131546710 131552202 - MGP_129S1SvImJ_P0068051 Dcdc2b protein_coding protein_coding MGP_129S1SvImJ_T0014801.1 MGP_129S1SvImJ_G0012890.1 mouse_genomes_project 4 134216841 134217249 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068014.1 MGP_129S1SvImJ_G0028828.1 mouse_genomes_project 4 131479406 131492292 - MGP_129S1SvImJ_P0068014 Lck protein_coding protein_coding MGP_129S1SvImJ_T0068015.1 MGP_129S1SvImJ_G0028828.1 mouse_genomes_project 4 131479411 131510796 - MGP_129S1SvImJ_P0068015 Lck protein_coding protein_coding MGP_129S1SvImJ_T0068016.1 MGP_129S1SvImJ_G0028828.1 mouse_genomes_project 4 131479411 131492311 - MGP_129S1SvImJ_P0068016 Lck protein_coding protein_coding MGP_129S1SvImJ_T0068017.1 MGP_129S1SvImJ_G0028828.1 mouse_genomes_project 4 131479957 131489783 - Lck protein_coding retained_intron MGP_129S1SvImJ_T0068018.1 MGP_129S1SvImJ_G0028828.1 mouse_genomes_project 4 131483071 131490166 - Lck protein_coding retained_intron MGP_129S1SvImJ_T0068019.1 MGP_129S1SvImJ_G0028828.1 mouse_genomes_project 4 131489410 131490396 - Lck protein_coding retained_intron MGP_129S1SvImJ_T0068020.1 MGP_129S1SvImJ_G0028828.1 mouse_genomes_project 4 131490782 131492007 - Lck protein_coding retained_intron MGP_129S1SvImJ_T0068021.1 MGP_129S1SvImJ_G0028828.1 mouse_genomes_project 4 131491284 131492292 - MGP_129S1SvImJ_P0068021 Lck protein_coding protein_coding MGP_129S1SvImJ_T0004440.1 MGP_129S1SvImJ_G0003873.1 mouse_genomes_project 4 8169473 8170857 - Gm11831 antisense antisense MGP_129S1SvImJ_T0066478.1 MGP_129S1SvImJ_G0028483.1 mouse_genomes_project 4 100028830 100096555 - MGP_129S1SvImJ_P0066478 Itgb3bp protein_coding protein_coding MGP_129S1SvImJ_T0066479.1 MGP_129S1SvImJ_G0028483.1 mouse_genomes_project 4 100029330 100172314 - Itgb3bp protein_coding processed_transcript MGP_129S1SvImJ_T0066480.1 MGP_129S1SvImJ_G0028483.1 mouse_genomes_project 4 100030759 100096461 - Itgb3bp protein_coding processed_transcript MGP_129S1SvImJ_T0066481.1 MGP_129S1SvImJ_G0028483.1 mouse_genomes_project 4 100035432 100096503 - Itgb3bp protein_coding processed_transcript MGP_129S1SvImJ_T0066482.1 MGP_129S1SvImJ_G0028483.1 mouse_genomes_project 4 100045384 100096459 - Itgb3bp protein_coding processed_transcript MGP_129S1SvImJ_T0065941.1 MGP_129S1SvImJ_G0028353.1 mouse_genomes_project 4 61433863 61452013 - MGP_129S1SvImJ_P0065941 Wdr31 protein_coding protein_coding MGP_129S1SvImJ_T0065942.1 MGP_129S1SvImJ_G0028353.1 mouse_genomes_project 4 61434865 61452013 - MGP_129S1SvImJ_P0065942 Wdr31 protein_coding protein_coding MGP_129S1SvImJ_T0065943.1 MGP_129S1SvImJ_G0028353.1 mouse_genomes_project 4 61434865 61441534 - MGP_129S1SvImJ_P0065943 Wdr31 protein_coding protein_coding MGP_129S1SvImJ_T0065944.1 MGP_129S1SvImJ_G0028353.1 mouse_genomes_project 4 61434865 61452013 - MGP_129S1SvImJ_P0065944 Wdr31 protein_coding protein_coding MGP_129S1SvImJ_T0065945.1 MGP_129S1SvImJ_G0028353.1 mouse_genomes_project 4 61438772 61440505 - Wdr31 protein_coding retained_intron MGP_129S1SvImJ_T0065946.1 MGP_129S1SvImJ_G0028353.1 mouse_genomes_project 4 61439617 61441975 - Wdr31 protein_coding retained_intron MGP_129S1SvImJ_T0065947.1 MGP_129S1SvImJ_G0028353.1 mouse_genomes_project 4 61444469 61452022 - MGP_129S1SvImJ_P0065947 Wdr31 protein_coding protein_coding MGP_129S1SvImJ_T0065948.1 MGP_129S1SvImJ_G0028353.1 mouse_genomes_project 4 61445124 61452000 - MGP_129S1SvImJ_P0065948 Wdr31 protein_coding protein_coding MGP_129S1SvImJ_T0065844.1 MGP_129S1SvImJ_G0028324.1 mouse_genomes_project 4 57117670 57215520 + MGP_129S1SvImJ_P0065844 Musk protein_coding protein_coding MGP_129S1SvImJ_T0065845.1 MGP_129S1SvImJ_G0028324.1 mouse_genomes_project 4 57117672 57215521 + MGP_129S1SvImJ_P0065845 Musk protein_coding protein_coding MGP_129S1SvImJ_T0065846.1 MGP_129S1SvImJ_G0028324.1 mouse_genomes_project 4 57117672 57215520 + MGP_129S1SvImJ_P0065846 Musk protein_coding protein_coding MGP_129S1SvImJ_T0065847.1 MGP_129S1SvImJ_G0028324.1 mouse_genomes_project 4 57117672 57215521 + MGP_129S1SvImJ_P0065847 Musk protein_coding protein_coding MGP_129S1SvImJ_T0065848.1 MGP_129S1SvImJ_G0028324.1 mouse_genomes_project 4 57117672 57215521 + MGP_129S1SvImJ_P0065848 Musk protein_coding protein_coding MGP_129S1SvImJ_T0065849.1 MGP_129S1SvImJ_G0028324.1 mouse_genomes_project 4 57117672 57215520 + MGP_129S1SvImJ_P0065849 Musk protein_coding protein_coding MGP_129S1SvImJ_T0065850.1 MGP_129S1SvImJ_G0028324.1 mouse_genomes_project 4 57117672 57215520 + MGP_129S1SvImJ_P0065850 Musk protein_coding protein_coding MGP_129S1SvImJ_T0065851.1 MGP_129S1SvImJ_G0028324.1 mouse_genomes_project 4 57117878 57140401 + Musk protein_coding processed_transcript MGP_129S1SvImJ_T0067715.1 MGP_129S1SvImJ_G0028759.1 mouse_genomes_project 4 126486608 126503932 - MGP_129S1SvImJ_P0067715 Cdca8 protein_coding protein_coding MGP_129S1SvImJ_T0067716.1 MGP_129S1SvImJ_G0028759.1 mouse_genomes_project 4 126487254 126503888 - MGP_129S1SvImJ_P0067716 Cdca8 protein_coding protein_coding MGP_129S1SvImJ_T0067717.1 MGP_129S1SvImJ_G0028759.1 mouse_genomes_project 4 126487699 126503422 - Cdca8 protein_coding processed_transcript MGP_129S1SvImJ_T0067718.1 MGP_129S1SvImJ_G0028759.1 mouse_genomes_project 4 126491767 126503796 - Cdca8 protein_coding processed_transcript MGP_129S1SvImJ_T0067719.1 MGP_129S1SvImJ_G0028759.1 mouse_genomes_project 4 126491947 126503857 - Cdca8 protein_coding retained_intron MGP_129S1SvImJ_T0067720.1 MGP_129S1SvImJ_G0028759.1 mouse_genomes_project 4 126494829 126506326 - MGP_129S1SvImJ_P0067720 Cdca8 protein_coding protein_coding MGP_129S1SvImJ_T0069793.1 MGP_129S1SvImJ_G0029219.1 mouse_genomes_project 4 159970702 159976034 + Cdk11b protein_coding processed_transcript MGP_129S1SvImJ_T0069794.1 MGP_129S1SvImJ_G0029219.1 mouse_genomes_project 4 159970717 159999328 + MGP_129S1SvImJ_P0069794 Cdk11b protein_coding protein_coding MGP_129S1SvImJ_T0069795.1 MGP_129S1SvImJ_G0029219.1 mouse_genomes_project 4 159970728 159971545 + Cdk11b protein_coding processed_transcript MGP_129S1SvImJ_T0069796.1 MGP_129S1SvImJ_G0029219.1 mouse_genomes_project 4 159970731 159999328 + MGP_129S1SvImJ_P0069796 Cdk11b protein_coding protein_coding MGP_129S1SvImJ_T0069797.1 MGP_129S1SvImJ_G0029219.1 mouse_genomes_project 4 159970758 159999328 + MGP_129S1SvImJ_P0069797 Cdk11b protein_coding protein_coding MGP_129S1SvImJ_T0069798.1 MGP_129S1SvImJ_G0029219.1 mouse_genomes_project 4 159979863 159985519 + Cdk11b protein_coding processed_transcript MGP_129S1SvImJ_T0069799.1 MGP_129S1SvImJ_G0029219.1 mouse_genomes_project 4 159996592 159997795 + Cdk11b protein_coding processed_transcript MGP_129S1SvImJ_T0069800.1 MGP_129S1SvImJ_G0029219.1 mouse_genomes_project 4 159996757 159997682 + Cdk11b protein_coding processed_transcript MGP_129S1SvImJ_T0101152.1 MGP_129S1SvImJ_G0039219.1 mouse_genomes_project 4 122817199 122817331 + Gm26162 snoRNA snoRNA MGP_129S1SvImJ_T0068238.1 MGP_129S1SvImJ_G0028866.1 mouse_genomes_project 4 134410381 134435102 + MGP_129S1SvImJ_P0068238 Taf12 protein_coding protein_coding MGP_129S1SvImJ_T0068239.1 MGP_129S1SvImJ_G0028866.1 mouse_genomes_project 4 134410397 134432018 + MGP_129S1SvImJ_P0068239 Taf12 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0068240.1 MGP_129S1SvImJ_G0028866.1 mouse_genomes_project 4 134410419 134412795 + Taf12 protein_coding processed_transcript MGP_129S1SvImJ_T0068241.1 MGP_129S1SvImJ_G0028866.1 mouse_genomes_project 4 134410422 134432068 + MGP_129S1SvImJ_P0068241 Taf12 protein_coding protein_coding MGP_129S1SvImJ_T0014503.1 MGP_129S1SvImJ_G0012592.1 mouse_genomes_project 4 30124782 30124942 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098593.1 MGP_129S1SvImJ_G0036678.1 mouse_genomes_project 4 95115725 95115839 + n-R5s189 rRNA rRNA MGP_129S1SvImJ_T0065930.1 MGP_129S1SvImJ_G0028349.1 mouse_genomes_project 4 61340672 61374912 + MGP_129S1SvImJ_P0065930 Slc31a1 protein_coding protein_coding MGP_129S1SvImJ_T0065931.1 MGP_129S1SvImJ_G0028349.1 mouse_genomes_project 4 61368421 61374912 + MGP_129S1SvImJ_P0065931 Slc31a1 protein_coding protein_coding MGP_129S1SvImJ_T0065932.1 MGP_129S1SvImJ_G0028349.1 mouse_genomes_project 4 61368452 61374912 + MGP_129S1SvImJ_P0065932 Slc31a1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0010591.1 MGP_129S1SvImJ_G0008707.1 mouse_genomes_project 4 19813949 19814052 + Gm24078 miRNA miRNA MGP_129S1SvImJ_T0014553.1 MGP_129S1SvImJ_G0012642.1 mouse_genomes_project 4 47182761 47183097 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007885.1 MGP_129S1SvImJ_G0006450.1 mouse_genomes_project 4 81477125 81479023 - Gm12914 lincRNA lincRNA MGP_129S1SvImJ_T0007833.1 MGP_129S1SvImJ_G0006405.1 mouse_genomes_project 4 31688466 31692672 + Gm12753 lincRNA lincRNA MGP_129S1SvImJ_T0014475.1 MGP_129S1SvImJ_G0012564.1 mouse_genomes_project 4 22650283 22651103 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067131.1 MGP_129S1SvImJ_G0028620.1 mouse_genomes_project 4 116983694 116995898 - MGP_129S1SvImJ_P0067131 Lurap1 protein_coding protein_coding MGP_129S1SvImJ_T0067134.1 MGP_129S1SvImJ_G0028620.1 mouse_genomes_project 4 116988808 117004810 - Lurap1 protein_coding processed_transcript MGP_129S1SvImJ_T0008022.1 MGP_129S1SvImJ_G0006548.1 mouse_genomes_project 4 143349589 143356877 + Gm13021 lincRNA lincRNA MGP_129S1SvImJ_T0065734.1 MGP_129S1SvImJ_G0028293.1 mouse_genomes_project 4 51464214 51465273 - MGP_129S1SvImJ_P0065734 Olfr273 protein_coding protein_coding MGP_129S1SvImJ_T0065735.1 MGP_129S1SvImJ_G0028293.1 mouse_genomes_project 4 51464258 51467167 - MGP_129S1SvImJ_P0065735 Olfr273 protein_coding protein_coding MGP_129S1SvImJ_T0068823.1 MGP_129S1SvImJ_G0028995.1 mouse_genomes_project 4 141069038 141074264 - Cda protein_coding retained_intron MGP_129S1SvImJ_T0068824.1 MGP_129S1SvImJ_G0028995.1 mouse_genomes_project 4 141069142 141102005 - MGP_129S1SvImJ_P0068824 Cda protein_coding protein_coding MGP_129S1SvImJ_T0007915.1 MGP_129S1SvImJ_G0006475.1 mouse_genomes_project 4 101588755 101619751 - Gm12796 lincRNA lincRNA MGP_129S1SvImJ_T0068157.1 MGP_129S1SvImJ_G0028852.1 mouse_genomes_project 4 132549852 132594435 - MGP_129S1SvImJ_P0068157 Nkain1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068158.1 MGP_129S1SvImJ_G0028852.1 mouse_genomes_project 4 132549868 132594642 - MGP_129S1SvImJ_P0068158 Nkain1 protein_coding protein_coding MGP_129S1SvImJ_T0068159.1 MGP_129S1SvImJ_G0028852.1 mouse_genomes_project 4 132558161 132577123 - Nkain1 protein_coding processed_transcript MGP_129S1SvImJ_T0018121.1 MGP_129S1SvImJ_G0015575.1 mouse_genomes_project 4 126504062 126505653 + 9930104L06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018122.1 MGP_129S1SvImJ_G0015575.1 mouse_genomes_project 4 126504072 126506469 + 9930104L06Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018123.1 MGP_129S1SvImJ_G0015575.1 mouse_genomes_project 4 126504076 126511772 + 9930104L06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018124.1 MGP_129S1SvImJ_G0015575.1 mouse_genomes_project 4 126504079 126513817 + 9930104L06Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018125.1 MGP_129S1SvImJ_G0015575.1 mouse_genomes_project 4 126504088 126513818 + 9930104L06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018126.1 MGP_129S1SvImJ_G0015575.1 mouse_genomes_project 4 126505792 126511921 + 9930104L06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018127.1 MGP_129S1SvImJ_G0015575.1 mouse_genomes_project 4 126512292 126513026 + 9930104L06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0014636.1 MGP_129S1SvImJ_G0012725.1 mouse_genomes_project 4 76275691 76276036 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068029.1 MGP_129S1SvImJ_G0028831.1 mouse_genomes_project 4 131538829 131545522 + MGP_129S1SvImJ_P0068029 Tmem234 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068030.1 MGP_129S1SvImJ_G0028831.1 mouse_genomes_project 4 131538829 131546080 + MGP_129S1SvImJ_P0068030 Tmem234 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068031.1 MGP_129S1SvImJ_G0028831.1 mouse_genomes_project 4 131538830 131557357 + MGP_129S1SvImJ_P0068031 Tmem234 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068032.1 MGP_129S1SvImJ_G0028831.1 mouse_genomes_project 4 131538841 131546491 + MGP_129S1SvImJ_P0068032 Tmem234 protein_coding protein_coding MGP_129S1SvImJ_T0068033.1 MGP_129S1SvImJ_G0028831.1 mouse_genomes_project 4 131538842 131545511 + MGP_129S1SvImJ_P0068033 Tmem234 protein_coding protein_coding MGP_129S1SvImJ_T0068034.1 MGP_129S1SvImJ_G0028831.1 mouse_genomes_project 4 131538848 131545701 + MGP_129S1SvImJ_P0068034 Tmem234 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068035.1 MGP_129S1SvImJ_G0028831.1 mouse_genomes_project 4 131538852 131545546 + MGP_129S1SvImJ_P0068035 Tmem234 protein_coding protein_coding MGP_129S1SvImJ_T0068036.1 MGP_129S1SvImJ_G0028831.1 mouse_genomes_project 4 131538852 131545780 + MGP_129S1SvImJ_P0068036 Tmem234 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068037.1 MGP_129S1SvImJ_G0028831.1 mouse_genomes_project 4 131538852 131561625 + MGP_129S1SvImJ_P0068037 Tmem234 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068038.1 MGP_129S1SvImJ_G0028831.1 mouse_genomes_project 4 131538856 131545789 + MGP_129S1SvImJ_P0068038 Tmem234 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068039.1 MGP_129S1SvImJ_G0028831.1 mouse_genomes_project 4 131538861 131546484 + MGP_129S1SvImJ_P0068039 Tmem234 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068040.1 MGP_129S1SvImJ_G0028831.1 mouse_genomes_project 4 131538862 131545126 + MGP_129S1SvImJ_P0068040 Tmem234 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068041.1 MGP_129S1SvImJ_G0028831.1 mouse_genomes_project 4 131538864 131545143 + MGP_129S1SvImJ_P0068041 Tmem234 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068042.1 MGP_129S1SvImJ_G0028831.1 mouse_genomes_project 4 131538865 131540861 + Tmem234 protein_coding processed_transcript MGP_129S1SvImJ_T0068043.1 MGP_129S1SvImJ_G0028831.1 mouse_genomes_project 4 131538868 131539611 + MGP_129S1SvImJ_P0068043 Tmem234 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068044.1 MGP_129S1SvImJ_G0028831.1 mouse_genomes_project 4 131539144 131545657 + MGP_129S1SvImJ_P0068044 Tmem234 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068045.1 MGP_129S1SvImJ_G0028831.1 mouse_genomes_project 4 131539144 131540092 + MGP_129S1SvImJ_P0068045 Tmem234 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068046.1 MGP_129S1SvImJ_G0028831.1 mouse_genomes_project 4 131539249 131539912 + Tmem234 protein_coding retained_intron MGP_129S1SvImJ_T0068047.1 MGP_129S1SvImJ_G0028831.1 mouse_genomes_project 4 131539353 131540379 + Tmem234 protein_coding retained_intron MGP_129S1SvImJ_T0068048.1 MGP_129S1SvImJ_G0028831.1 mouse_genomes_project 4 131540172 131545294 + Tmem234 protein_coding retained_intron MGP_129S1SvImJ_T0004628.1 MGP_129S1SvImJ_G0004017.1 mouse_genomes_project 4 158922455 158931798 + Gm13111 antisense antisense MGP_129S1SvImJ_T0010597.1 MGP_129S1SvImJ_G0008713.1 mouse_genomes_project 4 34345378 34345455 - Mir873a miRNA miRNA MGP_129S1SvImJ_T0007992.1 MGP_129S1SvImJ_G0006528.1 mouse_genomes_project 4 134402071 134404882 + Gm28874 lincRNA lincRNA MGP_129S1SvImJ_T0064890.1 MGP_129S1SvImJ_G0028103.1 mouse_genomes_project 4 22351924 22386455 - MGP_129S1SvImJ_P0064890 Ufl1 protein_coding protein_coding MGP_129S1SvImJ_T0064891.1 MGP_129S1SvImJ_G0028103.1 mouse_genomes_project 4 22353381 22386463 - Ufl1 protein_coding retained_intron MGP_129S1SvImJ_T0064892.1 MGP_129S1SvImJ_G0028103.1 mouse_genomes_project 4 22373968 22386451 - Ufl1 protein_coding processed_transcript MGP_129S1SvImJ_T0068644.1 MGP_129S1SvImJ_G0028956.1 mouse_genomes_project 4 138463204 138467609 - MGP_129S1SvImJ_P0068644 Lypla2 protein_coding protein_coding MGP_129S1SvImJ_T0068645.1 MGP_129S1SvImJ_G0028956.1 mouse_genomes_project 4 138463204 138466911 - MGP_129S1SvImJ_P0068645 Lypla2 protein_coding protein_coding MGP_129S1SvImJ_T0068646.1 MGP_129S1SvImJ_G0028956.1 mouse_genomes_project 4 138463681 138465448 - Lypla2 protein_coding retained_intron MGP_129S1SvImJ_T0068647.1 MGP_129S1SvImJ_G0028956.1 mouse_genomes_project 4 138463744 138467571 - Lypla2 protein_coding retained_intron MGP_129S1SvImJ_T0068648.1 MGP_129S1SvImJ_G0028956.1 mouse_genomes_project 4 138465627 138467586 - Lypla2 protein_coding retained_intron MGP_129S1SvImJ_T0014822.1 MGP_129S1SvImJ_G0012911.1 mouse_genomes_project 4 139162478 139162967 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065515.1 MGP_129S1SvImJ_G0028237.1 mouse_genomes_project 4 43187679 43197019 + MGP_129S1SvImJ_P0065515 Grhpr protein_coding protein_coding MGP_129S1SvImJ_T0065516.1 MGP_129S1SvImJ_G0028237.1 mouse_genomes_project 4 43187687 43190228 + MGP_129S1SvImJ_P0065516 Grhpr protein_coding protein_coding MGP_129S1SvImJ_T0065517.1 MGP_129S1SvImJ_G0028237.1 mouse_genomes_project 4 43187716 43195295 + MGP_129S1SvImJ_P0065517 Grhpr protein_coding protein_coding MGP_129S1SvImJ_T0065518.1 MGP_129S1SvImJ_G0028237.1 mouse_genomes_project 4 43187717 43193612 + Grhpr protein_coding processed_transcript MGP_129S1SvImJ_T0065519.1 MGP_129S1SvImJ_G0028237.1 mouse_genomes_project 4 43187745 43193533 + MGP_129S1SvImJ_P0065519 Grhpr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065520.1 MGP_129S1SvImJ_G0028237.1 mouse_genomes_project 4 43187784 43192675 + Grhpr protein_coding processed_transcript MGP_129S1SvImJ_T0099832.1 MGP_129S1SvImJ_G0037899.1 mouse_genomes_project 4 56574634 56574738 + Gm24277 snRNA snRNA MGP_129S1SvImJ_T0007812.1 MGP_129S1SvImJ_G0006385.1 mouse_genomes_project 4 7978461 8000219 + Gm26663 lincRNA lincRNA MGP_129S1SvImJ_T0014783.1 MGP_129S1SvImJ_G0012872.1 mouse_genomes_project 4 125411838 125412160 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014780.1 MGP_129S1SvImJ_G0012869.1 mouse_genomes_project 4 125096471 125096880 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099821.1 MGP_129S1SvImJ_G0037888.1 mouse_genomes_project 4 37698643 37698725 + Gm22850 snRNA snRNA MGP_129S1SvImJ_T0008010.1 MGP_129S1SvImJ_G0006537.1 mouse_genomes_project 4 139719792 139720666 - 1700037C06Rik lincRNA lincRNA MGP_129S1SvImJ_T0014734.1 MGP_129S1SvImJ_G0012823.1 mouse_genomes_project 4 112161777 112162825 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065989.1 MGP_129S1SvImJ_G0028363.1 mouse_genomes_project 4 62220704 62301559 + Col27a1 protein_coding retained_intron MGP_129S1SvImJ_T0065990.1 MGP_129S1SvImJ_G0028363.1 mouse_genomes_project 4 62222112 62282852 + Col27a1 protein_coding retained_intron MGP_129S1SvImJ_T0065991.1 MGP_129S1SvImJ_G0028363.1 mouse_genomes_project 4 62222135 62344333 + MGP_129S1SvImJ_P0065991 Col27a1 protein_coding protein_coding MGP_129S1SvImJ_T0065992.1 MGP_129S1SvImJ_G0028363.1 mouse_genomes_project 4 62222526 62344332 + MGP_129S1SvImJ_P0065992 Col27a1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0065993.1 MGP_129S1SvImJ_G0028363.1 mouse_genomes_project 4 62240970 62343055 + MGP_129S1SvImJ_P0065993 Col27a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065994.1 MGP_129S1SvImJ_G0028363.1 mouse_genomes_project 4 62290432 62343062 + MGP_129S1SvImJ_P0065994 Col27a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065995.1 MGP_129S1SvImJ_G0028363.1 mouse_genomes_project 4 62291278 62343091 + Col27a1 protein_coding retained_intron MGP_129S1SvImJ_T0065996.1 MGP_129S1SvImJ_G0028363.1 mouse_genomes_project 4 62340263 62343480 + Col27a1 protein_coding processed_transcript MGP_129S1SvImJ_T0069472.1 MGP_129S1SvImJ_G0029164.1 mouse_genomes_project 4 156010936 156070596 + MGP_129S1SvImJ_P0069472 Dnajc11 protein_coding protein_coding MGP_129S1SvImJ_T0069473.1 MGP_129S1SvImJ_G0029164.1 mouse_genomes_project 4 156010976 156065143 + Dnajc11 protein_coding retained_intron MGP_129S1SvImJ_T0069474.1 MGP_129S1SvImJ_G0029164.1 mouse_genomes_project 4 156010979 156046003 + Dnajc11 protein_coding retained_intron MGP_129S1SvImJ_T0069475.1 MGP_129S1SvImJ_G0029164.1 mouse_genomes_project 4 156010984 156069677 + Dnajc11 protein_coding retained_intron MGP_129S1SvImJ_T0069476.1 MGP_129S1SvImJ_G0029164.1 mouse_genomes_project 4 156010989 156069681 + MGP_129S1SvImJ_P0069476 Dnajc11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069477.1 MGP_129S1SvImJ_G0029164.1 mouse_genomes_project 4 156034865 156057028 + MGP_129S1SvImJ_P0069477 Dnajc11 protein_coding protein_coding MGP_129S1SvImJ_T0069478.1 MGP_129S1SvImJ_G0029164.1 mouse_genomes_project 4 156045650 156059952 + Dnajc11 protein_coding processed_transcript MGP_129S1SvImJ_T0069479.1 MGP_129S1SvImJ_G0029164.1 mouse_genomes_project 4 156056249 156062741 + Dnajc11 protein_coding processed_transcript MGP_129S1SvImJ_T0069480.1 MGP_129S1SvImJ_G0029164.1 mouse_genomes_project 4 156058153 156065504 + Dnajc11 protein_coding retained_intron MGP_129S1SvImJ_T0069481.1 MGP_129S1SvImJ_G0029164.1 mouse_genomes_project 4 156058222 156059949 + Dnajc11 protein_coding retained_intron MGP_129S1SvImJ_T0069482.1 MGP_129S1SvImJ_G0029164.1 mouse_genomes_project 4 156067442 156069195 + Dnajc11 protein_coding retained_intron MGP_129S1SvImJ_T0069483.1 MGP_129S1SvImJ_G0029164.1 mouse_genomes_project 4 156068201 156069686 + Dnajc11 protein_coding retained_intron MGP_129S1SvImJ_T0067665.1 MGP_129S1SvImJ_G0028743.1 mouse_genomes_project 4 125210693 125229333 - MGP_129S1SvImJ_P0067665 Akirin1 protein_coding protein_coding MGP_129S1SvImJ_T0067666.1 MGP_129S1SvImJ_G0028743.1 mouse_genomes_project 4 125213150 125219044 - Akirin1 protein_coding processed_transcript MGP_129S1SvImJ_T0067667.1 MGP_129S1SvImJ_G0028743.1 mouse_genomes_project 4 125214277 125229219 - Akirin1 protein_coding processed_transcript MGP_129S1SvImJ_T0014519.1 MGP_129S1SvImJ_G0012608.1 mouse_genomes_project 4 33655845 33656787 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099866.1 MGP_129S1SvImJ_G0037933.1 mouse_genomes_project 4 120731078 120731185 + Rnu6-ps2 snRNA snRNA MGP_129S1SvImJ_T0066155.1 MGP_129S1SvImJ_G0028403.1 mouse_genomes_project 4 83021494 83062417 + MGP_129S1SvImJ_P0066155 Snapc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066156.1 MGP_129S1SvImJ_G0028403.1 mouse_genomes_project 4 83021494 83051357 + MGP_129S1SvImJ_P0066156 Snapc3 protein_coding protein_coding MGP_129S1SvImJ_T0066157.1 MGP_129S1SvImJ_G0028403.1 mouse_genomes_project 4 83021501 83046550 + MGP_129S1SvImJ_P0066157 Snapc3 protein_coding protein_coding MGP_129S1SvImJ_T0066158.1 MGP_129S1SvImJ_G0028403.1 mouse_genomes_project 4 83021514 83052046 + MGP_129S1SvImJ_P0066158 Snapc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066159.1 MGP_129S1SvImJ_G0028403.1 mouse_genomes_project 4 83021514 83067802 + MGP_129S1SvImJ_P0066159 Snapc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066160.1 MGP_129S1SvImJ_G0028403.1 mouse_genomes_project 4 83021519 83068259 + MGP_129S1SvImJ_P0066160 Snapc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066161.1 MGP_129S1SvImJ_G0028403.1 mouse_genomes_project 4 83051818 83067749 + Snapc3 protein_coding processed_transcript MGP_129S1SvImJ_T0066162.1 MGP_129S1SvImJ_G0028403.1 mouse_genomes_project 4 83051966 83066711 + Snapc3 protein_coding processed_transcript MGP_129S1SvImJ_T0066169.1 MGP_129S1SvImJ_G0028403.1 mouse_genomes_project 4 83064548 83067794 + Snapc3 protein_coding retained_intron MGP_129S1SvImJ_T0069715.1 MGP_129S1SvImJ_G0029206.1 mouse_genomes_project 4 159355288 159360706 + MGP_129S1SvImJ_P0069715 Pex10 protein_coding protein_coding MGP_129S1SvImJ_T0069716.1 MGP_129S1SvImJ_G0029206.1 mouse_genomes_project 4 159355326 159357154 + Pex10 protein_coding processed_transcript MGP_129S1SvImJ_T0069717.1 MGP_129S1SvImJ_G0029206.1 mouse_genomes_project 4 159355329 159360454 + Pex10 protein_coding processed_transcript MGP_129S1SvImJ_T0069718.1 MGP_129S1SvImJ_G0029206.1 mouse_genomes_project 4 159355331 159356296 + Pex10 protein_coding processed_transcript MGP_129S1SvImJ_T0069719.1 MGP_129S1SvImJ_G0029206.1 mouse_genomes_project 4 159355331 159357389 + Pex10 protein_coding processed_transcript MGP_129S1SvImJ_T0101165.1 MGP_129S1SvImJ_G0039232.1 mouse_genomes_project 4 134450072 134450202 + Snora61 snoRNA snoRNA MGP_129S1SvImJ_T0069801.1 MGP_129S1SvImJ_G0029220.1 mouse_genomes_project 4 160000044 160002774 - MGP_129S1SvImJ_P0069801 Mmp23 protein_coding protein_coding MGP_129S1SvImJ_T0069802.1 MGP_129S1SvImJ_G0029220.1 mouse_genomes_project 4 160000046 160001415 - Mmp23 protein_coding retained_intron MGP_129S1SvImJ_T0069803.1 MGP_129S1SvImJ_G0029220.1 mouse_genomes_project 4 160001642 160002597 - Mmp23 protein_coding retained_intron MGP_129S1SvImJ_T0069804.1 MGP_129S1SvImJ_G0029220.1 mouse_genomes_project 4 160001659 160002282 - Mmp23 protein_coding retained_intron MGP_129S1SvImJ_T0066068.1 MGP_129S1SvImJ_G0028387.1 mouse_genomes_project 4 72945218 73020108 - MGP_129S1SvImJ_P0066068 Rasef protein_coding protein_coding MGP_129S1SvImJ_T0066069.1 MGP_129S1SvImJ_G0028387.1 mouse_genomes_project 4 72945218 73020215 - MGP_129S1SvImJ_P0066069 Rasef protein_coding protein_coding MGP_129S1SvImJ_T0067682.1 MGP_129S1SvImJ_G0028748.1 mouse_genomes_project 4 126145804 126146677 - MGP_129S1SvImJ_P0067682 3100002H09Rik protein_coding protein_coding MGP_129S1SvImJ_T0010604.1 MGP_129S1SvImJ_G0008720.1 mouse_genomes_project 4 41764526 41764659 + Gm25262 miRNA miRNA MGP_129S1SvImJ_T0065002.1 MGP_129S1SvImJ_G0028130.1 mouse_genomes_project 4 32275773 32320701 - MGP_129S1SvImJ_P0065002 Cfap206 protein_coding protein_coding MGP_129S1SvImJ_T0065003.1 MGP_129S1SvImJ_G0028130.1 mouse_genomes_project 4 32276175 32308825 - Cfap206 protein_coding processed_transcript MGP_129S1SvImJ_T0065004.1 MGP_129S1SvImJ_G0028130.1 mouse_genomes_project 4 32300803 32320673 - MGP_129S1SvImJ_P0065004 Cfap206 protein_coding protein_coding MGP_129S1SvImJ_T0065005.1 MGP_129S1SvImJ_G0028130.1 mouse_genomes_project 4 32311878 32320690 - MGP_129S1SvImJ_P0065005 Cfap206 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065006.1 MGP_129S1SvImJ_G0028130.1 mouse_genomes_project 4 32311909 32320690 - MGP_129S1SvImJ_P0065006 Cfap206 protein_coding protein_coding MGP_129S1SvImJ_T0065007.1 MGP_129S1SvImJ_G0028130.1 mouse_genomes_project 4 32314054 32320690 - Cfap206 protein_coding processed_transcript MGP_129S1SvImJ_T0007830.1 MGP_129S1SvImJ_G0006402.1 mouse_genomes_project 4 26390441 26391499 + Gm11916 lincRNA lincRNA MGP_129S1SvImJ_T0014588.1 MGP_129S1SvImJ_G0012677.1 mouse_genomes_project 4 57318836 57319410 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099822.1 MGP_129S1SvImJ_G0037889.1 mouse_genomes_project 4 37814402 37814464 - Gm26087 snRNA snRNA MGP_129S1SvImJ_T0068731.1 MGP_129S1SvImJ_G0028979.1 mouse_genomes_project 4 139933644 139972589 - MGP_129S1SvImJ_P0068731 Cdc42 protein_coding protein_coding MGP_129S1SvImJ_T0068732.1 MGP_129S1SvImJ_G0028979.1 mouse_genomes_project 4 139935710 139972568 - MGP_129S1SvImJ_P0068732 Cdc42 protein_coding protein_coding MGP_129S1SvImJ_T0004434.1 MGP_129S1SvImJ_G0003869.1 mouse_genomes_project 4 2855272 2861046 - 4930430E12Rik antisense antisense MGP_129S1SvImJ_T0004435.1 MGP_129S1SvImJ_G0003869.1 mouse_genomes_project 4 2855909 2861046 - 4930430E12Rik antisense antisense MGP_129S1SvImJ_T0069901.1 MGP_129S1SvImJ_G0029242.1 mouse_genomes_project 4 160358926 160380025 + MGP_129S1SvImJ_P0069901 Sdf4 protein_coding protein_coding MGP_129S1SvImJ_T0069902.1 MGP_129S1SvImJ_G0029242.1 mouse_genomes_project 4 160358965 160383386 + MGP_129S1SvImJ_P0069902 Sdf4 protein_coding protein_coding MGP_129S1SvImJ_T0069903.1 MGP_129S1SvImJ_G0029242.1 mouse_genomes_project 4 160359224 160371240 + MGP_129S1SvImJ_P0069903 Sdf4 protein_coding protein_coding MGP_129S1SvImJ_T0069904.1 MGP_129S1SvImJ_G0029242.1 mouse_genomes_project 4 160359431 160380133 + MGP_129S1SvImJ_P0069904 Sdf4 protein_coding protein_coding MGP_129S1SvImJ_T0069905.1 MGP_129S1SvImJ_G0029242.1 mouse_genomes_project 4 160367146 160368684 + Sdf4 protein_coding retained_intron MGP_129S1SvImJ_T0069906.1 MGP_129S1SvImJ_G0029242.1 mouse_genomes_project 4 160378324 160379672 + Sdf4 protein_coding retained_intron MGP_129S1SvImJ_T0101107.1 MGP_129S1SvImJ_G0039174.1 mouse_genomes_project 4 42590335 42590462 - Gm24376 snoRNA snoRNA MGP_129S1SvImJ_T0014570.1 MGP_129S1SvImJ_G0012659.1 mouse_genomes_project 4 51933572 51934019 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066171.1 MGP_129S1SvImJ_G0028405.1 mouse_genomes_project 4 83131665 83469176 + MGP_129S1SvImJ_P0066171 Ccdc171 protein_coding protein_coding MGP_129S1SvImJ_T0066172.1 MGP_129S1SvImJ_G0028405.1 mouse_genomes_project 4 83131724 83468953 + MGP_129S1SvImJ_P0066172 Ccdc171 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0066173.1 MGP_129S1SvImJ_G0028405.1 mouse_genomes_project 4 83131734 83158718 + MGP_129S1SvImJ_P0066173 Ccdc171 protein_coding protein_coding MGP_129S1SvImJ_T0066174.1 MGP_129S1SvImJ_G0028405.1 mouse_genomes_project 4 83131759 83469091 + MGP_129S1SvImJ_P0066174 Ccdc171 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066175.1 MGP_129S1SvImJ_G0028405.1 mouse_genomes_project 4 83151915 83163787 + Ccdc171 protein_coding processed_transcript MGP_129S1SvImJ_T0066176.1 MGP_129S1SvImJ_G0028405.1 mouse_genomes_project 4 83301237 83399123 + Ccdc171 protein_coding processed_transcript MGP_129S1SvImJ_T0066307.1 MGP_129S1SvImJ_G0028445.1 mouse_genomes_project 4 91233017 91387858 - MGP_129S1SvImJ_P0066307 Elavl2 protein_coding protein_coding MGP_129S1SvImJ_T0066308.1 MGP_129S1SvImJ_G0028445.1 mouse_genomes_project 4 91233017 91358323 - MGP_129S1SvImJ_P0066308 Elavl2 protein_coding protein_coding MGP_129S1SvImJ_T0066309.1 MGP_129S1SvImJ_G0028445.1 mouse_genomes_project 4 91233017 91358338 - MGP_129S1SvImJ_P0066309 Elavl2 protein_coding protein_coding MGP_129S1SvImJ_T0066310.1 MGP_129S1SvImJ_G0028445.1 mouse_genomes_project 4 91233017 91358303 - MGP_129S1SvImJ_P0066310 Elavl2 protein_coding protein_coding MGP_129S1SvImJ_T0066311.1 MGP_129S1SvImJ_G0028445.1 mouse_genomes_project 4 91235334 91236843 - Elavl2 protein_coding retained_intron MGP_129S1SvImJ_T0066312.1 MGP_129S1SvImJ_G0028445.1 mouse_genomes_project 4 91235494 91296171 - MGP_129S1SvImJ_P0066312 Elavl2 protein_coding protein_coding MGP_129S1SvImJ_T0066313.1 MGP_129S1SvImJ_G0028445.1 mouse_genomes_project 4 91235494 91294404 - MGP_129S1SvImJ_P0066313 Elavl2 protein_coding protein_coding MGP_129S1SvImJ_T0066314.1 MGP_129S1SvImJ_G0028445.1 mouse_genomes_project 4 91240910 91362566 - Elavl2 protein_coding retained_intron MGP_129S1SvImJ_T0066315.1 MGP_129S1SvImJ_G0028445.1 mouse_genomes_project 4 91246370 91343128 - MGP_129S1SvImJ_P0066315 Elavl2 protein_coding protein_coding MGP_129S1SvImJ_T0066316.1 MGP_129S1SvImJ_G0028445.1 mouse_genomes_project 4 91291444 91359294 - MGP_129S1SvImJ_P0066316 Elavl2 protein_coding protein_coding MGP_129S1SvImJ_T0066317.1 MGP_129S1SvImJ_G0028445.1 mouse_genomes_project 4 91291538 91358225 - MGP_129S1SvImJ_P0066317 Elavl2 protein_coding protein_coding MGP_129S1SvImJ_T0066318.1 MGP_129S1SvImJ_G0028445.1 mouse_genomes_project 4 91366697 91387850 - Elavl2 protein_coding processed_transcript MGP_129S1SvImJ_T0066319.1 MGP_129S1SvImJ_G0028445.1 mouse_genomes_project 4 91387768 91388668 - Elavl2 protein_coding processed_transcript MGP_129S1SvImJ_T0014539.1 MGP_129S1SvImJ_G0012628.1 mouse_genomes_project 4 42484459 42485091 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065719.1 MGP_129S1SvImJ_G0028288.1 mouse_genomes_project 4 48164289 48167567 - MGP_129S1SvImJ_P0065719 Ppp3r2 protein_coding protein_coding MGP_129S1SvImJ_T0014709.1 MGP_129S1SvImJ_G0012798.1 mouse_genomes_project 4 104006002 104007356 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068714.1 MGP_129S1SvImJ_G0028970.1 mouse_genomes_project 4 139189775 139192855 + MGP_129S1SvImJ_P0068714 4930549C01Rik protein_coding protein_coding MGP_129S1SvImJ_T0014813.1 MGP_129S1SvImJ_G0012902.1 mouse_genomes_project 4 137812364 137812442 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004576.1 MGP_129S1SvImJ_G0003978.1 mouse_genomes_project 4 140563934 140564977 - Gm13012 antisense antisense MGP_129S1SvImJ_T0004577.1 MGP_129S1SvImJ_G0003978.1 mouse_genomes_project 4 140563934 140565502 - Gm13012 antisense antisense MGP_129S1SvImJ_T0004578.1 MGP_129S1SvImJ_G0003978.1 mouse_genomes_project 4 140563934 140565491 - Gm13012 antisense antisense MGP_129S1SvImJ_T0068559.1 MGP_129S1SvImJ_G0028938.1 mouse_genomes_project 4 137320491 137327136 + MGP_129S1SvImJ_P0068559 Syf2 protein_coding protein_coding MGP_129S1SvImJ_T0068560.1 MGP_129S1SvImJ_G0028938.1 mouse_genomes_project 4 137320495 137324643 + Syf2 protein_coding retained_intron MGP_129S1SvImJ_T0068561.1 MGP_129S1SvImJ_G0028938.1 mouse_genomes_project 4 137320603 137325672 + Syf2 protein_coding retained_intron MGP_129S1SvImJ_T0069766.1 MGP_129S1SvImJ_G0029214.1 mouse_genomes_project 4 159801866 159803168 + Tmem52 protein_coding retained_intron MGP_129S1SvImJ_T0069767.1 MGP_129S1SvImJ_G0029214.1 mouse_genomes_project 4 159801866 159803611 + MGP_129S1SvImJ_P0069767 Tmem52 protein_coding protein_coding MGP_129S1SvImJ_T0069768.1 MGP_129S1SvImJ_G0029214.1 mouse_genomes_project 4 159801866 159803611 + MGP_129S1SvImJ_P0069768 Tmem52 protein_coding protein_coding MGP_129S1SvImJ_T0069769.1 MGP_129S1SvImJ_G0029214.1 mouse_genomes_project 4 159801883 159803610 + MGP_129S1SvImJ_P0069769 Tmem52 protein_coding protein_coding MGP_129S1SvImJ_T0069770.1 MGP_129S1SvImJ_G0029214.1 mouse_genomes_project 4 159801899 159803542 + Tmem52 protein_coding retained_intron MGP_129S1SvImJ_T0068966.1 MGP_129S1SvImJ_G0029035.1 mouse_genomes_project 4 144001610 144007024 + MGP_129S1SvImJ_P0068966 Mfap2 protein_coding protein_coding MGP_129S1SvImJ_T0068967.1 MGP_129S1SvImJ_G0029035.1 mouse_genomes_project 4 144001826 144006222 + Mfap2 protein_coding processed_transcript MGP_129S1SvImJ_T0068968.1 MGP_129S1SvImJ_G0029035.1 mouse_genomes_project 4 144001833 144007194 + MGP_129S1SvImJ_P0068968 Mfap2 protein_coding protein_coding MGP_129S1SvImJ_T0014663.1 MGP_129S1SvImJ_G0012752.1 mouse_genomes_project 4 89163636 89166800 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101093.1 MGP_129S1SvImJ_G0039160.1 mouse_genomes_project 4 12805891 12805959 - Gm26148 snoRNA snoRNA MGP_129S1SvImJ_T0067875.1 MGP_129S1SvImJ_G0028794.1 mouse_genomes_project 4 128906906 128979805 + MGP_129S1SvImJ_P0067875 Dlgap3 protein_coding protein_coding MGP_129S1SvImJ_T0067876.1 MGP_129S1SvImJ_G0028794.1 mouse_genomes_project 4 128910582 128979805 + MGP_129S1SvImJ_P0067876 Dlgap3 protein_coding protein_coding MGP_129S1SvImJ_T0067877.1 MGP_129S1SvImJ_G0028794.1 mouse_genomes_project 4 128934226 128979151 + MGP_129S1SvImJ_P0067877 Dlgap3 protein_coding protein_coding MGP_129S1SvImJ_T0067878.1 MGP_129S1SvImJ_G0028794.1 mouse_genomes_project 4 128944098 128957611 + Dlgap3 protein_coding processed_transcript MGP_129S1SvImJ_T0014804.1 MGP_129S1SvImJ_G0012893.1 mouse_genomes_project 4 134993389 134993674 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001439.1 MGP_129S1SvImJ_G0001362.1 mouse_genomes_project 4 124525547 124534861 - TEC TEC MGP_129S1SvImJ_T0001440.1 MGP_129S1SvImJ_G0001362.1 mouse_genomes_project 4 124530479 124534783 - TEC TEC MGP_129S1SvImJ_T0065446.1 MGP_129S1SvImJ_G0028229.1 mouse_genomes_project 4 42090692 42111853 + MGP_129S1SvImJ_P0065446 Glipr2 protein_coding protein_coding MGP_129S1SvImJ_T0065447.1 MGP_129S1SvImJ_G0028229.1 mouse_genomes_project 4 42090983 42111853 + MGP_129S1SvImJ_P0065447 Glipr2 protein_coding protein_coding MGP_129S1SvImJ_T0014725.1 MGP_129S1SvImJ_G0012814.1 mouse_genomes_project 4 109189581 109190117 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007890.1 MGP_129S1SvImJ_G0006453.1 mouse_genomes_project 4 82975419 82987370 + Gm11184 lincRNA lincRNA MGP_129S1SvImJ_T0014585.1 MGP_129S1SvImJ_G0012674.1 mouse_genomes_project 4 55153796 55154578 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099853.1 MGP_129S1SvImJ_G0037920.1 mouse_genomes_project 4 108763197 108763301 - Gm23354 snRNA snRNA MGP_129S1SvImJ_T0069642.1 MGP_129S1SvImJ_G0029193.1 mouse_genomes_project 4 158406420 158409592 - MGP_129S1SvImJ_P0069642 Tprgl protein_coding protein_coding MGP_129S1SvImJ_T0069643.1 MGP_129S1SvImJ_G0029193.1 mouse_genomes_project 4 158407075 158409592 - Tprgl protein_coding processed_transcript MGP_129S1SvImJ_T0069644.1 MGP_129S1SvImJ_G0029193.1 mouse_genomes_project 4 158407291 158409558 - MGP_129S1SvImJ_P0069644 Tprgl protein_coding protein_coding MGP_129S1SvImJ_T0069645.1 MGP_129S1SvImJ_G0029193.1 mouse_genomes_project 4 158407408 158409102 - Tprgl protein_coding processed_transcript MGP_129S1SvImJ_T0069646.1 MGP_129S1SvImJ_G0029193.1 mouse_genomes_project 4 158408502 158409532 - Tprgl protein_coding processed_transcript MGP_129S1SvImJ_T0004541.1 MGP_129S1SvImJ_G0003950.1 mouse_genomes_project 4 121529535 121544819 + Foxo6os antisense antisense MGP_129S1SvImJ_T0065521.1 MGP_129S1SvImJ_G0028238.1 mouse_genomes_project 4 43197526 43219961 - MGP_129S1SvImJ_P0065521 Zbtb5 protein_coding protein_coding MGP_129S1SvImJ_T0065522.1 MGP_129S1SvImJ_G0028238.1 mouse_genomes_project 4 43197529 43219979 - MGP_129S1SvImJ_P0065522 Zbtb5 protein_coding protein_coding MGP_129S1SvImJ_T0065523.1 MGP_129S1SvImJ_G0028238.1 mouse_genomes_project 4 43199266 43219979 - MGP_129S1SvImJ_P0065523 Zbtb5 protein_coding protein_coding MGP_129S1SvImJ_T0065524.1 MGP_129S1SvImJ_G0028238.1 mouse_genomes_project 4 43202453 43219712 - MGP_129S1SvImJ_P0065524 Zbtb5 protein_coding protein_coding MGP_129S1SvImJ_T0065583.1 MGP_129S1SvImJ_G0028252.1 mouse_genomes_project 4 44395441 44420043 - MGP_129S1SvImJ_P0065583 Tstd2 protein_coding protein_coding MGP_129S1SvImJ_T0065584.1 MGP_129S1SvImJ_G0028252.1 mouse_genomes_project 4 44397624 44420006 - MGP_129S1SvImJ_P0065584 Tstd2 protein_coding protein_coding MGP_129S1SvImJ_T0065585.1 MGP_129S1SvImJ_G0028252.1 mouse_genomes_project 4 44405301 44419981 - Tstd2 protein_coding retained_intron MGP_129S1SvImJ_T0065586.1 MGP_129S1SvImJ_G0028252.1 mouse_genomes_project 4 44410643 44413499 - Tstd2 protein_coding retained_intron MGP_129S1SvImJ_T0065587.1 MGP_129S1SvImJ_G0028252.1 mouse_genomes_project 4 44413509 44420262 - MGP_129S1SvImJ_P0065587 Tstd2 protein_coding protein_coding MGP_129S1SvImJ_T0065588.1 MGP_129S1SvImJ_G0028252.1 mouse_genomes_project 4 44413572 44419977 - MGP_129S1SvImJ_P0065588 Tstd2 protein_coding protein_coding MGP_129S1SvImJ_T0065589.1 MGP_129S1SvImJ_G0028252.1 mouse_genomes_project 4 44413721 44417351 - MGP_129S1SvImJ_P0065589 Tstd2 protein_coding protein_coding MGP_129S1SvImJ_T0065590.1 MGP_129S1SvImJ_G0028252.1 mouse_genomes_project 4 44417074 44420023 - MGP_129S1SvImJ_P0065590 Tstd2 protein_coding protein_coding MGP_129S1SvImJ_T0008036.1 MGP_129S1SvImJ_G0006562.1 mouse_genomes_project 4 154040960 154046252 - Gm13093 lincRNA lincRNA MGP_129S1SvImJ_T0065244.1 MGP_129S1SvImJ_G0028196.1 mouse_genomes_project 4 41058209 41081691 - MGP_129S1SvImJ_P0065244 Vcp protein_coding protein_coding MGP_129S1SvImJ_T0065245.1 MGP_129S1SvImJ_G0028196.1 mouse_genomes_project 4 41060976 41081362 - MGP_129S1SvImJ_P0065245 Vcp protein_coding unknown_likely_coding MGP_129S1SvImJ_T0065246.1 MGP_129S1SvImJ_G0028196.1 mouse_genomes_project 4 41062747 41064203 - Vcp protein_coding processed_transcript MGP_129S1SvImJ_T0065247.1 MGP_129S1SvImJ_G0028196.1 mouse_genomes_project 4 41064546 41067636 - Vcp protein_coding processed_transcript MGP_129S1SvImJ_T0065248.1 MGP_129S1SvImJ_G0028196.1 mouse_genomes_project 4 41073118 41074142 - Vcp protein_coding processed_transcript MGP_129S1SvImJ_T0065249.1 MGP_129S1SvImJ_G0028196.1 mouse_genomes_project 4 41074095 41081617 - Vcp protein_coding processed_transcript MGP_129S1SvImJ_T0068674.1 MGP_129S1SvImJ_G0028963.1 mouse_genomes_project 4 138780130 138807488 + Tcea3 protein_coding processed_transcript MGP_129S1SvImJ_T0068675.1 MGP_129S1SvImJ_G0028963.1 mouse_genomes_project 4 138780353 138812221 + MGP_129S1SvImJ_P0068675 Tcea3 protein_coding protein_coding MGP_129S1SvImJ_T0068676.1 MGP_129S1SvImJ_G0028963.1 mouse_genomes_project 4 138780374 138796761 + MGP_129S1SvImJ_P0068676 Tcea3 protein_coding protein_coding MGP_129S1SvImJ_T0011599.1 MGP_129S1SvImJ_G0009715.1 mouse_genomes_project 4 115754306 115754404 + Gm24045 misc_RNA misc_RNA MGP_129S1SvImJ_T0008014.1 MGP_129S1SvImJ_G0006541.1 mouse_genomes_project 4 140928780 140929256 + 2310026L22Rik lincRNA lincRNA MGP_129S1SvImJ_T0001442.1 MGP_129S1SvImJ_G0001364.1 mouse_genomes_project 4 133992992 133997606 + TEC TEC MGP_129S1SvImJ_T0065881.1 MGP_129S1SvImJ_G0028333.1 mouse_genomes_project 4 57915946 57989541 - MGP_129S1SvImJ_P0065881 AI481877 protein_coding protein_coding MGP_129S1SvImJ_T0065882.1 MGP_129S1SvImJ_G0028333.1 mouse_genomes_project 4 57955749 57984924 - AI481877 protein_coding retained_intron MGP_129S1SvImJ_T0014819.1 MGP_129S1SvImJ_G0012908.1 mouse_genomes_project 4 138495214 138495579 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001436.1 MGP_129S1SvImJ_G0001359.1 mouse_genomes_project 4 106901830 106902866 - TEC TEC MGP_129S1SvImJ_T0065629.1 MGP_129S1SvImJ_G0028264.1 mouse_genomes_project 4 45373651 45418724 - MGP_129S1SvImJ_P0065629 Anks6 protein_coding protein_coding MGP_129S1SvImJ_T0065630.1 MGP_129S1SvImJ_G0028264.1 mouse_genomes_project 4 45373671 45418724 - MGP_129S1SvImJ_P0065630 Anks6 protein_coding protein_coding MGP_129S1SvImJ_T0065631.1 MGP_129S1SvImJ_G0028264.1 mouse_genomes_project 4 45374982 45383679 - Anks6 protein_coding processed_transcript MGP_129S1SvImJ_T0065632.1 MGP_129S1SvImJ_G0028264.1 mouse_genomes_project 4 45396392 45398111 - Anks6 protein_coding processed_transcript MGP_129S1SvImJ_T0014850.1 MGP_129S1SvImJ_G0012939.1 mouse_genomes_project 4 153354236 153354655 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004462.1 MGP_129S1SvImJ_G0003890.1 mouse_genomes_project 4 41714077 41735054 + Gm12472 antisense antisense MGP_129S1SvImJ_T0099867.1 MGP_129S1SvImJ_G0037934.1 mouse_genomes_project 4 122197847 122197951 + Gm24678 snRNA snRNA MGP_129S1SvImJ_T0067360.1 MGP_129S1SvImJ_G0028661.1 mouse_genomes_project 4 118931669 118935271 - MGP_129S1SvImJ_P0067360 Artn protein_coding protein_coding MGP_129S1SvImJ_T0067361.1 MGP_129S1SvImJ_G0028661.1 mouse_genomes_project 4 118931670 118935005 - MGP_129S1SvImJ_P0067361 Artn protein_coding protein_coding MGP_129S1SvImJ_T0067362.1 MGP_129S1SvImJ_G0028661.1 mouse_genomes_project 4 118933549 118934985 - Artn protein_coding processed_transcript MGP_129S1SvImJ_T0067363.1 MGP_129S1SvImJ_G0028661.1 mouse_genomes_project 4 118933651 118934921 - Artn protein_coding processed_transcript MGP_129S1SvImJ_T0066882.1 MGP_129S1SvImJ_G0028566.1 mouse_genomes_project 4 109762849 109826153 + MGP_129S1SvImJ_P0066882 Nrd1 protein_coding protein_coding MGP_129S1SvImJ_T0066883.1 MGP_129S1SvImJ_G0028566.1 mouse_genomes_project 4 109762849 109826153 + MGP_129S1SvImJ_P0066883 Nrd1 protein_coding protein_coding MGP_129S1SvImJ_T0066884.1 MGP_129S1SvImJ_G0028566.1 mouse_genomes_project 4 109762964 109825537 + MGP_129S1SvImJ_P0066884 Nrd1 protein_coding protein_coding MGP_129S1SvImJ_T0066885.1 MGP_129S1SvImJ_G0028566.1 mouse_genomes_project 4 109780152 109809053 + MGP_129S1SvImJ_P0066885 Nrd1 protein_coding protein_coding MGP_129S1SvImJ_T0066886.1 MGP_129S1SvImJ_G0028566.1 mouse_genomes_project 4 109787390 109795912 + Nrd1 protein_coding retained_intron MGP_129S1SvImJ_T0066887.1 MGP_129S1SvImJ_G0028566.1 mouse_genomes_project 4 109795606 109807814 + Nrd1 protein_coding retained_intron MGP_129S1SvImJ_T0066888.1 MGP_129S1SvImJ_G0028566.1 mouse_genomes_project 4 109804155 109808515 + Nrd1 protein_coding retained_intron MGP_129S1SvImJ_T0066889.1 MGP_129S1SvImJ_G0028566.1 mouse_genomes_project 4 109804600 109825851 + Nrd1 protein_coding processed_transcript MGP_129S1SvImJ_T0066890.1 MGP_129S1SvImJ_G0028566.1 mouse_genomes_project 4 109810703 109815286 + Nrd1 protein_coding processed_transcript MGP_129S1SvImJ_T0066891.1 MGP_129S1SvImJ_G0028566.1 mouse_genomes_project 4 109819320 109821243 + Nrd1 protein_coding retained_intron MGP_129S1SvImJ_T0066892.1 MGP_129S1SvImJ_G0028566.1 mouse_genomes_project 4 109823309 109824176 + Nrd1 protein_coding retained_intron MGP_129S1SvImJ_T0066893.1 MGP_129S1SvImJ_G0028566.1 mouse_genomes_project 4 109823366 109825056 + Nrd1 protein_coding retained_intron MGP_129S1SvImJ_T0068534.1 MGP_129S1SvImJ_G0028931.1 mouse_genomes_project 4 136899623 136915588 - MGP_129S1SvImJ_P0068534 Sepn1 protein_coding protein_coding MGP_129S1SvImJ_T0068535.1 MGP_129S1SvImJ_G0028931.1 mouse_genomes_project 4 136901310 136902761 - Sepn1 protein_coding processed_transcript MGP_129S1SvImJ_T0014701.1 MGP_129S1SvImJ_G0012790.1 mouse_genomes_project 4 101641419 101641711 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014692.1 MGP_129S1SvImJ_G0012781.1 mouse_genomes_project 4 99656190 99656404 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065835.1 MGP_129S1SvImJ_G0028320.1 mouse_genomes_project 4 56719727 56726871 - MGP_129S1SvImJ_P0065835 D630039A03Rik protein_coding protein_coding MGP_129S1SvImJ_T0069570.1 MGP_129S1SvImJ_G0029181.1 mouse_genomes_project 4 156453409 156511903 + MGP_129S1SvImJ_P0069570 Chd5 protein_coding protein_coding MGP_129S1SvImJ_T0069571.1 MGP_129S1SvImJ_G0029181.1 mouse_genomes_project 4 156453409 156511903 + MGP_129S1SvImJ_P0069571 Chd5 protein_coding protein_coding MGP_129S1SvImJ_T0069572.1 MGP_129S1SvImJ_G0029181.1 mouse_genomes_project 4 156453645 156511890 + MGP_129S1SvImJ_P0069572 Chd5 protein_coding protein_coding MGP_129S1SvImJ_T0069573.1 MGP_129S1SvImJ_G0029181.1 mouse_genomes_project 4 156456353 156468356 + Chd5 protein_coding processed_transcript MGP_129S1SvImJ_T0069574.1 MGP_129S1SvImJ_G0029181.1 mouse_genomes_project 4 156489200 156511890 + Chd5 protein_coding processed_transcript MGP_129S1SvImJ_T0065331.1 MGP_129S1SvImJ_G0028205.1 mouse_genomes_project 4 41553084 41559210 + MGP_129S1SvImJ_P0065331 Tesk1 protein_coding protein_coding MGP_129S1SvImJ_T0065332.1 MGP_129S1SvImJ_G0028205.1 mouse_genomes_project 4 41554466 41558940 + MGP_129S1SvImJ_P0065332 Tesk1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065333.1 MGP_129S1SvImJ_G0028205.1 mouse_genomes_project 4 41555720 41556526 + Tesk1 protein_coding retained_intron MGP_129S1SvImJ_T0065334.1 MGP_129S1SvImJ_G0028205.1 mouse_genomes_project 4 41555853 41556963 + Tesk1 protein_coding retained_intron MGP_129S1SvImJ_T0065335.1 MGP_129S1SvImJ_G0028205.1 mouse_genomes_project 4 41556095 41557157 + Tesk1 protein_coding retained_intron MGP_129S1SvImJ_T0014445.1 MGP_129S1SvImJ_G0012534.1 mouse_genomes_project 4 13967729 13968702 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066470.1 MGP_129S1SvImJ_G0028481.1 mouse_genomes_project 4 99920462 99922776 + MGP_129S1SvImJ_P0066470 Foxd3 protein_coding protein_coding MGP_129S1SvImJ_T0008003.1 MGP_129S1SvImJ_G0006533.1 mouse_genomes_project 4 136109596 136110790 + Gm12974 lincRNA lincRNA MGP_129S1SvImJ_T0066723.1 MGP_129S1SvImJ_G0028536.1 mouse_genomes_project 4 107933850 107964439 + MGP_129S1SvImJ_P0066723 Hspb11 protein_coding protein_coding MGP_129S1SvImJ_T0066724.1 MGP_129S1SvImJ_G0028536.1 mouse_genomes_project 4 107934155 107947772 + Hspb11 protein_coding processed_transcript MGP_129S1SvImJ_T0066725.1 MGP_129S1SvImJ_G0028536.1 mouse_genomes_project 4 107934160 107964540 + MGP_129S1SvImJ_P0066725 Hspb11 protein_coding protein_coding MGP_129S1SvImJ_T0066726.1 MGP_129S1SvImJ_G0028536.1 mouse_genomes_project 4 107934182 107964530 + MGP_129S1SvImJ_P0066726 Hspb11 protein_coding protein_coding MGP_129S1SvImJ_T0066727.1 MGP_129S1SvImJ_G0028536.1 mouse_genomes_project 4 107943536 107964534 + Hspb11 protein_coding processed_transcript MGP_129S1SvImJ_T0010595.1 MGP_129S1SvImJ_G0008711.1 mouse_genomes_project 4 30959338 30959467 + Mir8118 miRNA miRNA MGP_129S1SvImJ_T0069259.1 MGP_129S1SvImJ_G0029128.1 mouse_genomes_project 4 152341184 152343048 + MGP_129S1SvImJ_P0069259 Masp2 protein_coding protein_coding MGP_129S1SvImJ_T0069260.1 MGP_129S1SvImJ_G0029128.1 mouse_genomes_project 4 152341194 152355618 + MGP_129S1SvImJ_P0069260 Masp2 protein_coding protein_coding MGP_129S1SvImJ_T0069261.1 MGP_129S1SvImJ_G0029128.1 mouse_genomes_project 4 152341198 152350331 + Masp2 protein_coding retained_intron MGP_129S1SvImJ_T0069262.1 MGP_129S1SvImJ_G0029128.1 mouse_genomes_project 4 152341205 152343048 + Masp2 protein_coding retained_intron MGP_129S1SvImJ_T0065145.1 MGP_129S1SvImJ_G0028165.1 mouse_genomes_project 4 39524317 39594184 + MGP_129S1SvImJ_P0065145 Dnaic1 protein_coding protein_coding MGP_129S1SvImJ_T0065146.1 MGP_129S1SvImJ_G0028165.1 mouse_genomes_project 4 39587669 39594184 + Dnaic1 protein_coding retained_intron MGP_129S1SvImJ_T0065147.1 MGP_129S1SvImJ_G0028165.1 mouse_genomes_project 4 39589373 39594184 + MGP_129S1SvImJ_P0065147 Dnaic1 protein_coding protein_coding MGP_129S1SvImJ_T0066320.1 MGP_129S1SvImJ_G0028446.1 mouse_genomes_project 4 92112157 92115050 - MGP_129S1SvImJ_P0066320 Izumo3 protein_coding protein_coding MGP_129S1SvImJ_T0066321.1 MGP_129S1SvImJ_G0028446.1 mouse_genomes_project 4 92112166 92115063 - MGP_129S1SvImJ_P0066321 Izumo3 protein_coding protein_coding MGP_129S1SvImJ_T0007957.1 MGP_129S1SvImJ_G0006505.1 mouse_genomes_project 4 126100168 126108458 + 4933407E24Rik lincRNA lincRNA MGP_129S1SvImJ_T0018142.1 MGP_129S1SvImJ_G0015582.1 mouse_genomes_project 4 156466961 156468371 - Gm13645 processed_transcript processed_transcript MGP_129S1SvImJ_T0067686.1 MGP_129S1SvImJ_G0028751.1 mouse_genomes_project 4 126245498 126252694 + MGP_129S1SvImJ_P0067686 Fhl3 protein_coding protein_coding MGP_129S1SvImJ_T0066551.1 MGP_129S1SvImJ_G0028501.1 mouse_genomes_project 4 103141264 103271476 + Sgip1 protein_coding retained_intron MGP_129S1SvImJ_T0066552.1 MGP_129S1SvImJ_G0028501.1 mouse_genomes_project 4 103155048 103369187 + MGP_129S1SvImJ_P0066552 Sgip1 protein_coding protein_coding MGP_129S1SvImJ_T0066553.1 MGP_129S1SvImJ_G0028501.1 mouse_genomes_project 4 103155241 103264366 + Sgip1 protein_coding processed_transcript MGP_129S1SvImJ_T0066554.1 MGP_129S1SvImJ_G0028501.1 mouse_genomes_project 4 103155258 103369068 + MGP_129S1SvImJ_P0066554 Sgip1 protein_coding protein_coding MGP_129S1SvImJ_T0066555.1 MGP_129S1SvImJ_G0028501.1 mouse_genomes_project 4 103155265 103270458 + MGP_129S1SvImJ_P0066555 Sgip1 protein_coding protein_coding MGP_129S1SvImJ_T0066556.1 MGP_129S1SvImJ_G0028501.1 mouse_genomes_project 4 103155268 103261802 + Sgip1 protein_coding processed_transcript MGP_129S1SvImJ_T0066557.1 MGP_129S1SvImJ_G0028501.1 mouse_genomes_project 4 103155276 103368382 + MGP_129S1SvImJ_P0066557 Sgip1 protein_coding protein_coding MGP_129S1SvImJ_T0066558.1 MGP_129S1SvImJ_G0028501.1 mouse_genomes_project 4 103155288 103270771 + Sgip1 protein_coding processed_transcript MGP_129S1SvImJ_T0066559.1 MGP_129S1SvImJ_G0028501.1 mouse_genomes_project 4 103155378 103314209 + MGP_129S1SvImJ_P0066559 Sgip1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066560.1 MGP_129S1SvImJ_G0028501.1 mouse_genomes_project 4 103155438 103370832 + MGP_129S1SvImJ_P0066560 Sgip1 protein_coding protein_coding MGP_129S1SvImJ_T0066561.1 MGP_129S1SvImJ_G0028501.1 mouse_genomes_project 4 103271213 103367808 + MGP_129S1SvImJ_P0066561 Sgip1 protein_coding protein_coding MGP_129S1SvImJ_T0066562.1 MGP_129S1SvImJ_G0028501.1 mouse_genomes_project 4 103316380 103323823 + Sgip1 protein_coding processed_transcript MGP_129S1SvImJ_T0066563.1 MGP_129S1SvImJ_G0028501.1 mouse_genomes_project 4 103322273 103323996 + Sgip1 protein_coding processed_transcript MGP_129S1SvImJ_T0066564.1 MGP_129S1SvImJ_G0028501.1 mouse_genomes_project 4 103358044 103363603 + Sgip1 protein_coding processed_transcript MGP_129S1SvImJ_T0064955.1 MGP_129S1SvImJ_G0028118.1 mouse_genomes_project 4 30557967 30593051 + MGP_129S1SvImJ_P0064955 Gabrr2 protein_coding protein_coding MGP_129S1SvImJ_T0064956.1 MGP_129S1SvImJ_G0028118.1 mouse_genomes_project 4 30558080 30593051 + MGP_129S1SvImJ_P0064956 Gabrr2 protein_coding protein_coding MGP_129S1SvImJ_T0064957.1 MGP_129S1SvImJ_G0028118.1 mouse_genomes_project 4 30575222 30581991 + MGP_129S1SvImJ_P0064957 Gabrr2 protein_coding protein_coding MGP_129S1SvImJ_T0064958.1 MGP_129S1SvImJ_G0028118.1 mouse_genomes_project 4 30577931 30582247 + MGP_129S1SvImJ_P0064958 Gabrr2 protein_coding protein_coding MGP_129S1SvImJ_T0065564.1 MGP_129S1SvImJ_G0028248.1 mouse_genomes_project 4 44107031 44152671 + MGP_129S1SvImJ_P0065564 Stra6l protein_coding protein_coding MGP_129S1SvImJ_T0065565.1 MGP_129S1SvImJ_G0028248.1 mouse_genomes_project 4 44107183 44152671 + MGP_129S1SvImJ_P0065565 Stra6l protein_coding protein_coding MGP_129S1SvImJ_T0065566.1 MGP_129S1SvImJ_G0028248.1 mouse_genomes_project 4 44107314 44152671 + MGP_129S1SvImJ_P0065566 Stra6l protein_coding protein_coding MGP_129S1SvImJ_T0065567.1 MGP_129S1SvImJ_G0028248.1 mouse_genomes_project 4 44107364 44119224 + Stra6l protein_coding processed_transcript MGP_129S1SvImJ_T0065568.1 MGP_129S1SvImJ_G0028248.1 mouse_genomes_project 4 44139873 44152281 + Stra6l protein_coding retained_intron MGP_129S1SvImJ_T0101148.1 MGP_129S1SvImJ_G0039215.1 mouse_genomes_project 4 118118235 118118314 - Snord55 snoRNA snoRNA MGP_129S1SvImJ_T0014700.1 MGP_129S1SvImJ_G0012789.1 mouse_genomes_project 4 101491233 101491405 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067711.1 MGP_129S1SvImJ_G0028757.1 mouse_genomes_project 4 126414553 126421478 - MGP_129S1SvImJ_P0067711 Maneal protein_coding protein_coding MGP_129S1SvImJ_T0064573.1 MGP_129S1SvImJ_G0028027.1 mouse_genomes_project 4 429742 434372 + MGP_129S1SvImJ_P0064573 Chchd7 protein_coding protein_coding MGP_129S1SvImJ_T0064574.1 MGP_129S1SvImJ_G0028027.1 mouse_genomes_project 4 429742 434367 + MGP_129S1SvImJ_P0064574 Chchd7 protein_coding protein_coding MGP_129S1SvImJ_T0064575.1 MGP_129S1SvImJ_G0028027.1 mouse_genomes_project 4 429744 434316 + MGP_129S1SvImJ_P0064575 Chchd7 protein_coding protein_coding MGP_129S1SvImJ_T0064576.1 MGP_129S1SvImJ_G0028027.1 mouse_genomes_project 4 429768 434365 + MGP_129S1SvImJ_P0064576 Chchd7 protein_coding protein_coding MGP_129S1SvImJ_T0064577.1 MGP_129S1SvImJ_G0028027.1 mouse_genomes_project 4 429768 434372 + MGP_129S1SvImJ_P0064577 Chchd7 protein_coding protein_coding MGP_129S1SvImJ_T0064578.1 MGP_129S1SvImJ_G0028027.1 mouse_genomes_project 4 429768 441872 + MGP_129S1SvImJ_P0064578 Chchd7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064579.1 MGP_129S1SvImJ_G0028027.1 mouse_genomes_project 4 429768 433894 + MGP_129S1SvImJ_P0064579 Chchd7 protein_coding protein_coding MGP_129S1SvImJ_T0064580.1 MGP_129S1SvImJ_G0028027.1 mouse_genomes_project 4 429768 434372 + MGP_129S1SvImJ_P0064580 Chchd7 protein_coding protein_coding MGP_129S1SvImJ_T0064581.1 MGP_129S1SvImJ_G0028027.1 mouse_genomes_project 4 429774 434348 + MGP_129S1SvImJ_P0064581 Chchd7 protein_coding protein_coding MGP_129S1SvImJ_T0064582.1 MGP_129S1SvImJ_G0028027.1 mouse_genomes_project 4 429897 434250 + MGP_129S1SvImJ_P0064582 Chchd7 protein_coding protein_coding MGP_129S1SvImJ_T0064583.1 MGP_129S1SvImJ_G0028027.1 mouse_genomes_project 4 430276 432263 + Chchd7 protein_coding retained_intron MGP_129S1SvImJ_T0064584.1 MGP_129S1SvImJ_G0028027.1 mouse_genomes_project 4 430354 434370 + MGP_129S1SvImJ_P0064584 Chchd7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064585.1 MGP_129S1SvImJ_G0028027.1 mouse_genomes_project 4 431697 434369 + MGP_129S1SvImJ_P0064585 Chchd7 protein_coding protein_coding MGP_129S1SvImJ_T0064586.1 MGP_129S1SvImJ_G0028027.1 mouse_genomes_project 4 434257 441037 + Chchd7 protein_coding processed_transcript MGP_129S1SvImJ_T0064587.1 MGP_129S1SvImJ_G0028027.1 mouse_genomes_project 4 437645 440698 + Chchd7 protein_coding retained_intron MGP_129S1SvImJ_T0014498.1 MGP_129S1SvImJ_G0012587.1 mouse_genomes_project 4 28827406 28827881 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102548.1 MGP_129S1SvImJ_G0040381.1 mouse_genomes_project 4 142173461 142174612 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0018065.1 MGP_129S1SvImJ_G0015535.1 mouse_genomes_project 4 15393711 15896051 + processed_transcript processed_transcript MGP_129S1SvImJ_T0065837.1 MGP_129S1SvImJ_G0028322.1 mouse_genomes_project 4 56800352 56826368 - Txndc8 protein_coding processed_transcript MGP_129S1SvImJ_T0065838.1 MGP_129S1SvImJ_G0028322.1 mouse_genomes_project 4 56800352 56826467 - MGP_129S1SvImJ_P0065838 Txndc8 protein_coding protein_coding MGP_129S1SvImJ_T0065839.1 MGP_129S1SvImJ_G0028322.1 mouse_genomes_project 4 56800354 56817675 - MGP_129S1SvImJ_P0065839 Txndc8 protein_coding protein_coding MGP_129S1SvImJ_T0011576.1 MGP_129S1SvImJ_G0009692.1 mouse_genomes_project 4 15703729 15704017 + Gm25971 misc_RNA misc_RNA MGP_129S1SvImJ_T0014594.1 MGP_129S1SvImJ_G0012683.1 mouse_genomes_project 4 60824042 60825305 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010676.1 MGP_129S1SvImJ_G0008792.1 mouse_genomes_project 4 160426162 160426252 - Mir200a miRNA miRNA MGP_129S1SvImJ_T0065607.1 MGP_129S1SvImJ_G0028259.1 mouse_genomes_project 4 44809151 44823538 + MGP_129S1SvImJ_P0065607 Nans protein_coding protein_coding MGP_129S1SvImJ_T0065608.1 MGP_129S1SvImJ_G0028259.1 mouse_genomes_project 4 44809222 44815040 + Nans protein_coding processed_transcript MGP_129S1SvImJ_T0065609.1 MGP_129S1SvImJ_G0028259.1 mouse_genomes_project 4 44809277 44818988 + Nans protein_coding processed_transcript MGP_129S1SvImJ_T0065610.1 MGP_129S1SvImJ_G0028259.1 mouse_genomes_project 4 44809888 44820651 + Nans protein_coding processed_transcript MGP_129S1SvImJ_T0004540.1 MGP_129S1SvImJ_G0003949.1 mouse_genomes_project 4 120436547 120440983 - Gm12927 antisense antisense MGP_129S1SvImJ_T0014402.1 MGP_129S1SvImJ_G0012491.1 mouse_genomes_project 4 1517569 1517937 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067270.1 MGP_129S1SvImJ_G0028646.1 mouse_genomes_project 4 118116292 118118709 - MGP_129S1SvImJ_P0067270 Rps8 protein_coding protein_coding MGP_129S1SvImJ_T0067271.1 MGP_129S1SvImJ_G0028646.1 mouse_genomes_project 4 118116299 118116963 - Rps8 protein_coding retained_intron MGP_129S1SvImJ_T0067272.1 MGP_129S1SvImJ_G0028646.1 mouse_genomes_project 4 118116837 118117647 - Rps8 protein_coding retained_intron MGP_129S1SvImJ_T0067273.1 MGP_129S1SvImJ_G0028646.1 mouse_genomes_project 4 118116856 118118550 - Rps8 protein_coding retained_intron MGP_129S1SvImJ_T0067274.1 MGP_129S1SvImJ_G0028646.1 mouse_genomes_project 4 118116975 118118535 - Rps8 protein_coding retained_intron MGP_129S1SvImJ_T0067275.1 MGP_129S1SvImJ_G0028646.1 mouse_genomes_project 4 118117151 118118538 - Rps8 protein_coding retained_intron MGP_129S1SvImJ_T0010651.1 MGP_129S1SvImJ_G0008767.1 mouse_genomes_project 4 136826774 136826865 + Gm23634 miRNA miRNA MGP_129S1SvImJ_T0068951.1 MGP_129S1SvImJ_G0029031.1 mouse_genomes_project 4 143794250 143830793 - MGP_129S1SvImJ_P0068951 Padi1 protein_coding protein_coding MGP_129S1SvImJ_T0066294.1 MGP_129S1SvImJ_G0028436.1 mouse_genomes_project 4 88705186 88705885 + MGP_129S1SvImJ_P0066294 protein_coding protein_coding MGP_129S1SvImJ_T0069857.1 MGP_129S1SvImJ_G0029233.1 mouse_genomes_project 4 160217061 160229791 + MGP_129S1SvImJ_P0069857 Dvl1 protein_coding protein_coding MGP_129S1SvImJ_T0069858.1 MGP_129S1SvImJ_G0029233.1 mouse_genomes_project 4 160217120 160229366 + MGP_129S1SvImJ_P0069858 Dvl1 protein_coding protein_coding MGP_129S1SvImJ_T0069859.1 MGP_129S1SvImJ_G0029233.1 mouse_genomes_project 4 160217125 160229790 + Dvl1 protein_coding retained_intron MGP_129S1SvImJ_T0069860.1 MGP_129S1SvImJ_G0029233.1 mouse_genomes_project 4 160217225 160229791 + Dvl1 protein_coding retained_intron MGP_129S1SvImJ_T0069861.1 MGP_129S1SvImJ_G0029233.1 mouse_genomes_project 4 160217245 160229791 + Dvl1 protein_coding retained_intron MGP_129S1SvImJ_T0069862.1 MGP_129S1SvImJ_G0029233.1 mouse_genomes_project 4 160217330 160229791 + Dvl1 protein_coding retained_intron MGP_129S1SvImJ_T0069863.1 MGP_129S1SvImJ_G0029233.1 mouse_genomes_project 4 160223899 160224441 + Dvl1 protein_coding processed_transcript MGP_129S1SvImJ_T0069864.1 MGP_129S1SvImJ_G0029233.1 mouse_genomes_project 4 160225060 160226720 + Dvl1 protein_coding retained_intron MGP_129S1SvImJ_T0065420.1 MGP_129S1SvImJ_G0028219.1 mouse_genomes_project 4 41787454 41789676 - Hint2 protein_coding processed_transcript MGP_129S1SvImJ_T0065421.1 MGP_129S1SvImJ_G0028219.1 mouse_genomes_project 4 41787454 41789671 - Hint2 protein_coding processed_transcript MGP_129S1SvImJ_T0065422.1 MGP_129S1SvImJ_G0028219.1 mouse_genomes_project 4 41787455 41788184 - Hint2 protein_coding processed_transcript MGP_129S1SvImJ_T0065423.1 MGP_129S1SvImJ_G0028219.1 mouse_genomes_project 4 41787456 41787955 - Hint2 protein_coding processed_transcript MGP_129S1SvImJ_T0065424.1 MGP_129S1SvImJ_G0028219.1 mouse_genomes_project 4 41787456 41789694 - MGP_129S1SvImJ_P0065424 Hint2 protein_coding protein_coding MGP_129S1SvImJ_T0065425.1 MGP_129S1SvImJ_G0028219.1 mouse_genomes_project 4 41787457 41789676 - Hint2 protein_coding processed_transcript MGP_129S1SvImJ_T0065426.1 MGP_129S1SvImJ_G0028219.1 mouse_genomes_project 4 41787901 41788971 - Hint2 protein_coding processed_transcript MGP_129S1SvImJ_T0010678.1 MGP_129S1SvImJ_G0008794.1 mouse_genomes_project 4 160603203 160603260 - Mir7658 miRNA miRNA MGP_129S1SvImJ_T0008040.1 MGP_129S1SvImJ_G0006566.1 mouse_genomes_project 4 157327214 157328571 - Gm13173 lincRNA lincRNA MGP_129S1SvImJ_T0066388.1 MGP_129S1SvImJ_G0028461.1 mouse_genomes_project 4 96299925 96336856 - MGP_129S1SvImJ_P0066388 Cyp2j7 protein_coding protein_coding MGP_129S1SvImJ_T0067622.1 MGP_129S1SvImJ_G0028733.1 mouse_genomes_project 4 124534337 124536097 + MGP_129S1SvImJ_P0067622 protein_coding protein_coding MGP_129S1SvImJ_T0067879.1 MGP_129S1SvImJ_G0028795.1 mouse_genomes_project 4 128986566 128990586 + MGP_129S1SvImJ_P0067879 Smim12 protein_coding protein_coding MGP_129S1SvImJ_T0004567.1 MGP_129S1SvImJ_G0003970.1 mouse_genomes_project 4 136174830 136179534 + Gm12977 antisense antisense MGP_129S1SvImJ_T0004568.1 MGP_129S1SvImJ_G0003970.1 mouse_genomes_project 4 136175478 136178760 + Gm12977 antisense antisense MGP_129S1SvImJ_T0068780.1 MGP_129S1SvImJ_G0028988.1 mouse_genomes_project 4 140540601 140605664 + MGP_129S1SvImJ_P0068780 Ece1 protein_coding protein_coding MGP_129S1SvImJ_T0068781.1 MGP_129S1SvImJ_G0028988.1 mouse_genomes_project 4 140605280 140628561 + MGP_129S1SvImJ_P0068781 Ece1 protein_coding protein_coding MGP_129S1SvImJ_T0068782.1 MGP_129S1SvImJ_G0028988.1 mouse_genomes_project 4 140605491 140617862 + Ece1 protein_coding processed_transcript MGP_129S1SvImJ_T0068783.1 MGP_129S1SvImJ_G0028988.1 mouse_genomes_project 4 140605535 140663560 + MGP_129S1SvImJ_P0068783 Ece1 protein_coding protein_coding MGP_129S1SvImJ_T0011600.1 MGP_129S1SvImJ_G0009716.1 mouse_genomes_project 4 117643143 117643234 + Gm27688 misc_RNA misc_RNA MGP_129S1SvImJ_T0102535.1 MGP_129S1SvImJ_G0040368.1 mouse_genomes_project 4 115908537 115927101 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0065634.1 MGP_129S1SvImJ_G0028266.1 mouse_genomes_project 4 45576934 45687889 + MGP_129S1SvImJ_P0065634 Col15a1 protein_coding protein_coding MGP_129S1SvImJ_T0065635.1 MGP_129S1SvImJ_G0028266.1 mouse_genomes_project 4 45576934 45687885 + MGP_129S1SvImJ_P0065635 Col15a1 protein_coding protein_coding MGP_129S1SvImJ_T0065636.1 MGP_129S1SvImJ_G0028266.1 mouse_genomes_project 4 45604095 45616131 + Col15a1 protein_coding processed_transcript MGP_129S1SvImJ_T0065637.1 MGP_129S1SvImJ_G0028266.1 mouse_genomes_project 4 45613313 45685201 + MGP_129S1SvImJ_P0065637 Col15a1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0065638.1 MGP_129S1SvImJ_G0028266.1 mouse_genomes_project 4 45629152 45633944 + Col15a1 protein_coding processed_transcript MGP_129S1SvImJ_T0065639.1 MGP_129S1SvImJ_G0028266.1 mouse_genomes_project 4 45629473 45634133 + Col15a1 protein_coding processed_transcript MGP_129S1SvImJ_T0065640.1 MGP_129S1SvImJ_G0028266.1 mouse_genomes_project 4 45661112 45666315 + MGP_129S1SvImJ_P0065640 Col15a1 protein_coding protein_coding MGP_129S1SvImJ_T0065641.1 MGP_129S1SvImJ_G0028266.1 mouse_genomes_project 4 45661124 45687889 + MGP_129S1SvImJ_P0065641 Col15a1 protein_coding protein_coding MGP_129S1SvImJ_T0065642.1 MGP_129S1SvImJ_G0028266.1 mouse_genomes_project 4 45661342 45672622 + MGP_129S1SvImJ_P0065642 Col15a1 protein_coding protein_coding MGP_129S1SvImJ_T0065643.1 MGP_129S1SvImJ_G0028266.1 mouse_genomes_project 4 45677054 45687884 + MGP_129S1SvImJ_P0065643 Col15a1 protein_coding protein_coding MGP_129S1SvImJ_T0065336.1 MGP_129S1SvImJ_G0028206.1 mouse_genomes_project 4 41557607 41565761 - MGP_129S1SvImJ_P0065336 Cd72 protein_coding protein_coding MGP_129S1SvImJ_T0065337.1 MGP_129S1SvImJ_G0028206.1 mouse_genomes_project 4 41558869 41565697 - MGP_129S1SvImJ_P0065337 Cd72 protein_coding protein_coding MGP_129S1SvImJ_T0065338.1 MGP_129S1SvImJ_G0028206.1 mouse_genomes_project 4 41558869 41565718 - MGP_129S1SvImJ_P0065338 Cd72 protein_coding protein_coding MGP_129S1SvImJ_T0065339.1 MGP_129S1SvImJ_G0028206.1 mouse_genomes_project 4 41558869 41565762 - MGP_129S1SvImJ_P0065339 Cd72 protein_coding protein_coding MGP_129S1SvImJ_T0065340.1 MGP_129S1SvImJ_G0028206.1 mouse_genomes_project 4 41558880 41565760 - MGP_129S1SvImJ_P0065340 Cd72 protein_coding protein_coding MGP_129S1SvImJ_T0065341.1 MGP_129S1SvImJ_G0028206.1 mouse_genomes_project 4 41559175 41561078 - Cd72 protein_coding retained_intron MGP_129S1SvImJ_T0065342.1 MGP_129S1SvImJ_G0028206.1 mouse_genomes_project 4 41560980 41563506 - Cd72 protein_coding retained_intron MGP_129S1SvImJ_T0065343.1 MGP_129S1SvImJ_G0028206.1 mouse_genomes_project 4 41563443 41565746 - Cd72 protein_coding retained_intron MGP_129S1SvImJ_T0065344.1 MGP_129S1SvImJ_G0028206.1 mouse_genomes_project 4 41563454 41565457 - Cd72 protein_coding processed_transcript MGP_129S1SvImJ_T0065345.1 MGP_129S1SvImJ_G0028206.1 mouse_genomes_project 4 41563734 41565760 - Cd72 protein_coding processed_transcript MGP_129S1SvImJ_T0014762.1 MGP_129S1SvImJ_G0012851.1 mouse_genomes_project 4 120712100 120712514 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014520.1 MGP_129S1SvImJ_G0012609.1 mouse_genomes_project 4 34114244 34115050 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067176.1 MGP_129S1SvImJ_G0028628.1 mouse_genomes_project 4 117500556 117504104 + Ccdc17 protein_coding processed_transcript MGP_129S1SvImJ_T0067177.1 MGP_129S1SvImJ_G0028628.1 mouse_genomes_project 4 117500632 117504169 + MGP_129S1SvImJ_P0067177 Ccdc17 protein_coding protein_coding MGP_129S1SvImJ_T0067178.1 MGP_129S1SvImJ_G0028628.1 mouse_genomes_project 4 117500705 117502103 + Ccdc17 protein_coding processed_transcript MGP_129S1SvImJ_T0067179.1 MGP_129S1SvImJ_G0028628.1 mouse_genomes_project 4 117501662 117504125 + Ccdc17 protein_coding processed_transcript MGP_129S1SvImJ_T0067180.1 MGP_129S1SvImJ_G0028628.1 mouse_genomes_project 4 117502394 117503067 + Ccdc17 protein_coding processed_transcript MGP_129S1SvImJ_T0069181.1 MGP_129S1SvImJ_G0029108.1 mouse_genomes_project 4 151545763 151547073 + MGP_129S1SvImJ_P0069181 Fv1 protein_coding protein_coding MGP_129S1SvImJ_T0099862.1 MGP_129S1SvImJ_G0037929.1 mouse_genomes_project 4 117977220 117977319 + Gm22335 snRNA snRNA MGP_129S1SvImJ_T0004492.1 MGP_129S1SvImJ_G0003917.1 mouse_genomes_project 4 95022141 95077886 + Gm12694 antisense antisense MGP_129S1SvImJ_T0066082.1 MGP_129S1SvImJ_G0028391.1 mouse_genomes_project 4 74553192 74554144 - MGP_129S1SvImJ_P0066082 Tmem261 protein_coding protein_coding MGP_129S1SvImJ_T0014541.1 MGP_129S1SvImJ_G0012630.1 mouse_genomes_project 4 43354938 43355297 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007938.1 MGP_129S1SvImJ_G0006490.1 mouse_genomes_project 4 109385379 109388983 - Gm17354 lincRNA lincRNA MGP_129S1SvImJ_T0069117.1 MGP_129S1SvImJ_G0029073.1 mouse_genomes_project 4 146744559 146747452 + MGP_129S1SvImJ_P0069117 protein_coding protein_coding MGP_129S1SvImJ_T0004484.1 MGP_129S1SvImJ_G0003910.1 mouse_genomes_project 4 73527790 73529183 - A230083N12Rik antisense antisense MGP_129S1SvImJ_T0010627.1 MGP_129S1SvImJ_G0008743.1 mouse_genomes_project 4 108128292 108128377 + Gm24804 miRNA miRNA MGP_129S1SvImJ_T0065554.1 MGP_129S1SvImJ_G0028245.1 mouse_genomes_project 4 43658207 43721243 - Shb protein_coding processed_transcript MGP_129S1SvImJ_T0065555.1 MGP_129S1SvImJ_G0028245.1 mouse_genomes_project 4 43658207 43770234 - MGP_129S1SvImJ_P0065555 Shb protein_coding protein_coding MGP_129S1SvImJ_T0065556.1 MGP_129S1SvImJ_G0028245.1 mouse_genomes_project 4 43679631 43731282 - Shb protein_coding processed_transcript MGP_129S1SvImJ_T0065557.1 MGP_129S1SvImJ_G0028245.1 mouse_genomes_project 4 43682431 43727844 - Shb protein_coding retained_intron MGP_129S1SvImJ_T0065558.1 MGP_129S1SvImJ_G0028245.1 mouse_genomes_project 4 43693056 43728235 - MGP_129S1SvImJ_P0065558 Shb protein_coding protein_coding MGP_129S1SvImJ_T0065559.1 MGP_129S1SvImJ_G0028245.1 mouse_genomes_project 4 43693247 43772374 - MGP_129S1SvImJ_P0065559 Shb protein_coding protein_coding MGP_129S1SvImJ_T0066876.1 MGP_129S1SvImJ_G0028564.1 mouse_genomes_project 4 109603847 109605476 + MGP_129S1SvImJ_P0066876 Kti12 protein_coding protein_coding MGP_129S1SvImJ_T0102552.1 MGP_129S1SvImJ_G0040385.1 mouse_genomes_project 4 147718499 147720711 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0066332.1 MGP_129S1SvImJ_G0028451.1 mouse_genomes_project 4 94670750 94725567 + MGP_129S1SvImJ_P0066332 Ift74 protein_coding protein_coding MGP_129S1SvImJ_T0066333.1 MGP_129S1SvImJ_G0028451.1 mouse_genomes_project 4 94670750 94755811 + MGP_129S1SvImJ_P0066333 Ift74 protein_coding protein_coding MGP_129S1SvImJ_T0066336.1 MGP_129S1SvImJ_G0028451.1 mouse_genomes_project 4 94740500 94749599 + Ift74 protein_coding processed_transcript MGP_129S1SvImJ_T0014763.1 MGP_129S1SvImJ_G0012852.1 mouse_genomes_project 4 120722208 120723165 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101172.1 MGP_129S1SvImJ_G0039239.1 mouse_genomes_project 4 158103115 158103247 + Gm25880 snoRNA snoRNA MGP_129S1SvImJ_T0007875.1 MGP_129S1SvImJ_G0006440.1 mouse_genomes_project 4 61709526 61713548 - Gm11211 lincRNA lincRNA MGP_129S1SvImJ_T0065159.1 MGP_129S1SvImJ_G0028170.1 mouse_genomes_project 4 39689618 39696911 - MGP_129S1SvImJ_P0065159 Arid3c protein_coding protein_coding MGP_129S1SvImJ_T0065160.1 MGP_129S1SvImJ_G0028170.1 mouse_genomes_project 4 39689921 39696069 - MGP_129S1SvImJ_P0065160 Arid3c protein_coding protein_coding MGP_129S1SvImJ_T0065161.1 MGP_129S1SvImJ_G0028170.1 mouse_genomes_project 4 39689921 39696069 - MGP_129S1SvImJ_P0065161 Arid3c protein_coding protein_coding MGP_129S1SvImJ_T0065162.1 MGP_129S1SvImJ_G0028170.1 mouse_genomes_project 4 39695708 39696911 - MGP_129S1SvImJ_P0065162 Arid3c protein_coding protein_coding MGP_129S1SvImJ_T0014540.1 MGP_129S1SvImJ_G0012629.1 mouse_genomes_project 4 42551994 42552410 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068839.1 MGP_129S1SvImJ_G0029001.1 mouse_genomes_project 4 141509703 141531093 + MGP_129S1SvImJ_P0068839 Pla2g2c protein_coding protein_coding MGP_129S1SvImJ_T0068840.1 MGP_129S1SvImJ_G0029001.1 mouse_genomes_project 4 141510236 141528655 + MGP_129S1SvImJ_P0068840 Pla2g2c protein_coding protein_coding MGP_129S1SvImJ_T0068841.1 MGP_129S1SvImJ_G0029001.1 mouse_genomes_project 4 141510236 141529536 + MGP_129S1SvImJ_P0068841 Pla2g2c protein_coding protein_coding MGP_129S1SvImJ_T0011586.1 MGP_129S1SvImJ_G0009702.1 mouse_genomes_project 4 50103290 50103559 + Gm22563 misc_RNA misc_RNA MGP_129S1SvImJ_T0066023.1 MGP_129S1SvImJ_G0028371.1 mouse_genomes_project 4 62627085 62643039 - MGP_129S1SvImJ_P0066023 1700018C11Rik protein_coding protein_coding MGP_129S1SvImJ_T0066024.1 MGP_129S1SvImJ_G0028371.1 mouse_genomes_project 4 62627085 62643051 - MGP_129S1SvImJ_P0066024 1700018C11Rik protein_coding protein_coding MGP_129S1SvImJ_T0068088.1 MGP_129S1SvImJ_G0028839.1 mouse_genomes_project 4 131775335 131809692 + Ptp4a2 protein_coding processed_transcript MGP_129S1SvImJ_T0068089.1 MGP_129S1SvImJ_G0028839.1 mouse_genomes_project 4 131775338 131776640 + Ptp4a2 protein_coding retained_intron MGP_129S1SvImJ_T0068090.1 MGP_129S1SvImJ_G0028839.1 mouse_genomes_project 4 131785964 131823935 + MGP_129S1SvImJ_P0068090 Ptp4a2 protein_coding protein_coding MGP_129S1SvImJ_T0068091.1 MGP_129S1SvImJ_G0028839.1 mouse_genomes_project 4 131786286 131809656 + Ptp4a2 protein_coding processed_transcript MGP_129S1SvImJ_T0068092.1 MGP_129S1SvImJ_G0028839.1 mouse_genomes_project 4 131786314 131823960 + MGP_129S1SvImJ_P0068092 Ptp4a2 protein_coding protein_coding MGP_129S1SvImJ_T0068093.1 MGP_129S1SvImJ_G0028839.1 mouse_genomes_project 4 131786327 131809826 + Ptp4a2 protein_coding processed_transcript MGP_129S1SvImJ_T0068094.1 MGP_129S1SvImJ_G0028839.1 mouse_genomes_project 4 131809296 131820011 + Ptp4a2 protein_coding processed_transcript MGP_129S1SvImJ_T0065201.1 MGP_129S1SvImJ_G0028181.1 mouse_genomes_project 4 40112204 40112870 + MGP_129S1SvImJ_P0065201 protein_coding protein_coding MGP_129S1SvImJ_T0102530.1 MGP_129S1SvImJ_G0040363.1 mouse_genomes_project 4 96459488 96476007 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0068632.1 MGP_129S1SvImJ_G0028954.1 mouse_genomes_project 4 138441683 138457591 + MGP_129S1SvImJ_P0068632 Hmgcl protein_coding protein_coding MGP_129S1SvImJ_T0068633.1 MGP_129S1SvImJ_G0028954.1 mouse_genomes_project 4 138441700 138455880 + Hmgcl protein_coding processed_transcript MGP_129S1SvImJ_T0068634.1 MGP_129S1SvImJ_G0028954.1 mouse_genomes_project 4 138443813 138453728 + Hmgcl protein_coding processed_transcript MGP_129S1SvImJ_T0068635.1 MGP_129S1SvImJ_G0028954.1 mouse_genomes_project 4 138454705 138457591 + Hmgcl protein_coding processed_transcript MGP_129S1SvImJ_T0068636.1 MGP_129S1SvImJ_G0028954.1 mouse_genomes_project 4 138455307 138457188 + Hmgcl protein_coding processed_transcript MGP_129S1SvImJ_T0069075.1 MGP_129S1SvImJ_G0029060.1 mouse_genomes_project 4 144919306 144951795 - MGP_129S1SvImJ_P0069075 Ctrc protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069077.1 MGP_129S1SvImJ_G0029060.1 mouse_genomes_project 4 144944174 144951889 - Ctrc protein_coding processed_transcript MGP_129S1SvImJ_T0069078.1 MGP_129S1SvImJ_G0029060.1 mouse_genomes_project 4 144944174 144951891 - MGP_129S1SvImJ_P0069078 Ctrc protein_coding protein_coding MGP_129S1SvImJ_T0069079.1 MGP_129S1SvImJ_G0029060.1 mouse_genomes_project 4 144944174 144951815 - MGP_129S1SvImJ_P0069079 Ctrc protein_coding protein_coding MGP_129S1SvImJ_T0069080.1 MGP_129S1SvImJ_G0029060.1 mouse_genomes_project 4 144950360 144950754 - Ctrc protein_coding processed_transcript MGP_129S1SvImJ_T0069900.1 MGP_129S1SvImJ_G0029241.1 mouse_genomes_project 4 160355582 160358736 - MGP_129S1SvImJ_P0069900 B3galt6 protein_coding protein_coding MGP_129S1SvImJ_T0014410.1 MGP_129S1SvImJ_G0012499.1 mouse_genomes_project 4 4735979 4736439 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066533.1 MGP_129S1SvImJ_G0028497.1 mouse_genomes_project 4 102228615 102233353 - MGP_129S1SvImJ_P0066533 C130073F10Rik protein_coding protein_coding MGP_129S1SvImJ_T0067510.1 MGP_129S1SvImJ_G0028701.1 mouse_genomes_project 4 120733386 120741940 - MGP_129S1SvImJ_P0067510 AA415398 protein_coding protein_coding MGP_129S1SvImJ_T0067511.1 MGP_129S1SvImJ_G0028701.1 mouse_genomes_project 4 120734515 120738412 - AA415398 protein_coding processed_transcript MGP_129S1SvImJ_T0067512.1 MGP_129S1SvImJ_G0028701.1 mouse_genomes_project 4 120734742 120742301 - AA415398 protein_coding processed_transcript MGP_129S1SvImJ_T0067513.1 MGP_129S1SvImJ_G0028701.1 mouse_genomes_project 4 120736550 120742700 - AA415398 protein_coding processed_transcript MGP_129S1SvImJ_T0098936.1 MGP_129S1SvImJ_G0037014.1 mouse_genomes_project 4 109255568 109259513 + Gm12737 sense_intronic sense_intronic MGP_129S1SvImJ_T0065903.1 MGP_129S1SvImJ_G0028338.1 mouse_genomes_project 4 58540528 58683648 + MGP_129S1SvImJ_P0065903 E130308A19Rik protein_coding protein_coding MGP_129S1SvImJ_T0065904.1 MGP_129S1SvImJ_G0028338.1 mouse_genomes_project 4 58540560 58640823 + MGP_129S1SvImJ_P0065904 E130308A19Rik protein_coding protein_coding MGP_129S1SvImJ_T0065905.1 MGP_129S1SvImJ_G0028338.1 mouse_genomes_project 4 58608739 58639665 + E130308A19Rik protein_coding processed_transcript MGP_129S1SvImJ_T0069546.1 MGP_129S1SvImJ_G0029178.1 mouse_genomes_project 4 156408131 156418007 + MGP_129S1SvImJ_P0069546 Icmt protein_coding protein_coding MGP_129S1SvImJ_T0069547.1 MGP_129S1SvImJ_G0029178.1 mouse_genomes_project 4 156408208 156418006 + MGP_129S1SvImJ_P0069547 Icmt protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069548.1 MGP_129S1SvImJ_G0029178.1 mouse_genomes_project 4 156408560 156411657 + Icmt protein_coding processed_transcript MGP_129S1SvImJ_T0069549.1 MGP_129S1SvImJ_G0029178.1 mouse_genomes_project 4 156416275 156417954 + Icmt protein_coding processed_transcript MGP_129S1SvImJ_T0001427.1 MGP_129S1SvImJ_G0001350.1 mouse_genomes_project 4 13282609 13283215 + TEC TEC MGP_129S1SvImJ_T0011606.1 MGP_129S1SvImJ_G0009722.1 mouse_genomes_project 4 156308642 156308978 - Gm27500 misc_RNA misc_RNA MGP_129S1SvImJ_T0067505.1 MGP_129S1SvImJ_G0028699.1 mouse_genomes_project 4 120620245 120651254 + MGP_129S1SvImJ_P0067505 Zmynd12 protein_coding protein_coding MGP_129S1SvImJ_T0067506.1 MGP_129S1SvImJ_G0028699.1 mouse_genomes_project 4 120620303 120647588 + Zmynd12 protein_coding processed_transcript MGP_129S1SvImJ_T0067507.1 MGP_129S1SvImJ_G0028699.1 mouse_genomes_project 4 120642146 120665975 + Zmynd12 protein_coding processed_transcript MGP_129S1SvImJ_T0099895.1 MGP_129S1SvImJ_G0037962.1 mouse_genomes_project 4 160392827 160392928 - Gm25982 snRNA snRNA MGP_129S1SvImJ_T0014606.1 MGP_129S1SvImJ_G0012695.1 mouse_genomes_project 4 67455773 67457818 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014419.1 MGP_129S1SvImJ_G0012508.1 mouse_genomes_project 4 7582808 7583294 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014491.1 MGP_129S1SvImJ_G0012580.1 mouse_genomes_project 4 25886582 25886846 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068609.1 MGP_129S1SvImJ_G0028947.1 mouse_genomes_project 4 138137856 138164392 + MGP_129S1SvImJ_P0068609 Ifnlr1 protein_coding protein_coding MGP_129S1SvImJ_T0010671.1 MGP_129S1SvImJ_G0008787.1 mouse_genomes_project 4 153534528 153534592 - Mir7023 miRNA miRNA MGP_129S1SvImJ_T0068671.1 MGP_129S1SvImJ_G0028961.1 mouse_genomes_project 4 138700134 138723856 + MGP_129S1SvImJ_P0068671 E2f2 protein_coding protein_coding MGP_129S1SvImJ_T0068672.1 MGP_129S1SvImJ_G0028961.1 mouse_genomes_project 4 138708518 138714601 + E2f2 protein_coding processed_transcript MGP_129S1SvImJ_T0007859.1 MGP_129S1SvImJ_G0006427.1 mouse_genomes_project 4 53323151 53352258 + Gm12478 lincRNA lincRNA MGP_129S1SvImJ_T0066835.1 MGP_129S1SvImJ_G0028553.1 mouse_genomes_project 4 109101456 109116973 - MGP_129S1SvImJ_P0066835 Fam159a protein_coding protein_coding MGP_129S1SvImJ_T0069128.1 MGP_129S1SvImJ_G0029083.1 mouse_genomes_project 4 147712620 147722330 + MGP_129S1SvImJ_P0069128 protein_coding protein_coding MGP_129S1SvImJ_T0069135.1 MGP_129S1SvImJ_G0029083.1 mouse_genomes_project 4 147718486 147721871 + MGP_129S1SvImJ_P0069135 protein_coding protein_coding MGP_129S1SvImJ_T0098713.1 MGP_129S1SvImJ_G0036798.1 mouse_genomes_project 4 41610493 41610764 - Rmrp ribozyme ribozyme MGP_129S1SvImJ_T0014697.1 MGP_129S1SvImJ_G0012786.1 mouse_genomes_project 4 100628250 100628995 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067538.1 MGP_129S1SvImJ_G0028708.1 mouse_genomes_project 4 121658036 121708431 + Scmh1 protein_coding processed_transcript MGP_129S1SvImJ_T0067539.1 MGP_129S1SvImJ_G0028708.1 mouse_genomes_project 4 121658062 121788901 + MGP_129S1SvImJ_P0067539 Scmh1 protein_coding protein_coding MGP_129S1SvImJ_T0067540.1 MGP_129S1SvImJ_G0028708.1 mouse_genomes_project 4 121658121 121719236 + Scmh1 protein_coding processed_transcript MGP_129S1SvImJ_T0067541.1 MGP_129S1SvImJ_G0028708.1 mouse_genomes_project 4 121658136 121701705 + Scmh1 protein_coding processed_transcript MGP_129S1SvImJ_T0067542.1 MGP_129S1SvImJ_G0028708.1 mouse_genomes_project 4 121658183 121719201 + MGP_129S1SvImJ_P0067542 Scmh1 protein_coding protein_coding MGP_129S1SvImJ_T0067543.1 MGP_129S1SvImJ_G0028708.1 mouse_genomes_project 4 121700119 121788901 + MGP_129S1SvImJ_P0067543 Scmh1 protein_coding protein_coding MGP_129S1SvImJ_T0067544.1 MGP_129S1SvImJ_G0028708.1 mouse_genomes_project 4 121707158 121788879 + MGP_129S1SvImJ_P0067544 Scmh1 protein_coding protein_coding MGP_129S1SvImJ_T0067545.1 MGP_129S1SvImJ_G0028708.1 mouse_genomes_project 4 121718196 121787976 + MGP_129S1SvImJ_P0067545 Scmh1 protein_coding protein_coding MGP_129S1SvImJ_T0067546.1 MGP_129S1SvImJ_G0028708.1 mouse_genomes_project 4 121761597 121788901 + Scmh1 protein_coding processed_transcript MGP_129S1SvImJ_T0067547.1 MGP_129S1SvImJ_G0028708.1 mouse_genomes_project 4 121763123 121781375 + MGP_129S1SvImJ_P0067547 Scmh1 protein_coding protein_coding MGP_129S1SvImJ_T0067548.1 MGP_129S1SvImJ_G0028708.1 mouse_genomes_project 4 121776443 121788901 + Scmh1 protein_coding processed_transcript MGP_129S1SvImJ_T0067549.1 MGP_129S1SvImJ_G0028708.1 mouse_genomes_project 4 121776496 121788518 + Scmh1 protein_coding processed_transcript MGP_129S1SvImJ_T0067550.1 MGP_129S1SvImJ_G0028708.1 mouse_genomes_project 4 121786545 121787937 + Scmh1 protein_coding processed_transcript MGP_129S1SvImJ_T0067551.1 MGP_129S1SvImJ_G0028708.1 mouse_genomes_project 4 121787871 121788903 + Scmh1 protein_coding processed_transcript MGP_129S1SvImJ_T0018100.1 MGP_129S1SvImJ_G0015559.1 mouse_genomes_project 4 95538662 95563228 - Gm830 processed_transcript processed_transcript MGP_129S1SvImJ_T0099849.1 MGP_129S1SvImJ_G0037916.1 mouse_genomes_project 4 100150813 100150895 + Gm26425 snRNA snRNA MGP_129S1SvImJ_T0014604.1 MGP_129S1SvImJ_G0012693.1 mouse_genomes_project 4 66290117 66290486 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099891.1 MGP_129S1SvImJ_G0037958.1 mouse_genomes_project 4 153370805 153370909 - Gm24381 snRNA snRNA MGP_129S1SvImJ_T0014820.1 MGP_129S1SvImJ_G0012909.1 mouse_genomes_project 4 138582141 138582599 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065916.1 MGP_129S1SvImJ_G0028344.1 mouse_genomes_project 4 61046876 61118135 - MGP_129S1SvImJ_P0065916 Mup21 protein_coding protein_coding MGP_129S1SvImJ_T0067073.1 MGP_129S1SvImJ_G0028607.1 mouse_genomes_project 4 116619340 116620525 - MGP_129S1SvImJ_P0067073 Tex38 protein_coding protein_coding MGP_129S1SvImJ_T0066223.1 MGP_129S1SvImJ_G0028412.1 mouse_genomes_project 4 86341436 86374658 - MGP_129S1SvImJ_P0066223 Haus6 protein_coding protein_coding MGP_129S1SvImJ_T0066224.1 MGP_129S1SvImJ_G0028412.1 mouse_genomes_project 4 86347602 86374658 - Haus6 protein_coding processed_transcript MGP_129S1SvImJ_T0066225.1 MGP_129S1SvImJ_G0028412.1 mouse_genomes_project 4 86365481 86374622 - Haus6 protein_coding processed_transcript MGP_129S1SvImJ_T0066226.1 MGP_129S1SvImJ_G0028412.1 mouse_genomes_project 4 86368241 86374652 - MGP_129S1SvImJ_P0066226 Haus6 protein_coding protein_coding MGP_129S1SvImJ_T0101155.1 MGP_129S1SvImJ_G0039222.1 mouse_genomes_project 4 128528616 128528746 - Gm24161 snoRNA snoRNA MGP_129S1SvImJ_T0101141.1 MGP_129S1SvImJ_G0039208.1 mouse_genomes_project 4 104049071 104049200 - Gm25877 snoRNA snoRNA MGP_129S1SvImJ_T0065371.1 MGP_129S1SvImJ_G0028211.1 mouse_genomes_project 4 41635319 41644057 - Tpm2 protein_coding processed_transcript MGP_129S1SvImJ_T0065372.1 MGP_129S1SvImJ_G0028211.1 mouse_genomes_project 4 41635319 41644083 - MGP_129S1SvImJ_P0065372 Tpm2 protein_coding protein_coding MGP_129S1SvImJ_T0065373.1 MGP_129S1SvImJ_G0028211.1 mouse_genomes_project 4 41635319 41644214 - MGP_129S1SvImJ_P0065373 Tpm2 protein_coding protein_coding MGP_129S1SvImJ_T0065374.1 MGP_129S1SvImJ_G0028211.1 mouse_genomes_project 4 41635320 41644007 - MGP_129S1SvImJ_P0065374 Tpm2 protein_coding protein_coding MGP_129S1SvImJ_T0065375.1 MGP_129S1SvImJ_G0028211.1 mouse_genomes_project 4 41636290 41640293 - Tpm2 protein_coding processed_transcript MGP_129S1SvImJ_T0065376.1 MGP_129S1SvImJ_G0028211.1 mouse_genomes_project 4 41640291 41644384 - MGP_129S1SvImJ_P0065376 Tpm2 protein_coding protein_coding MGP_129S1SvImJ_T0069562.1 MGP_129S1SvImJ_G0029180.1 mouse_genomes_project 4 156438479 156445797 + Rpl22 protein_coding processed_transcript MGP_129S1SvImJ_T0069563.1 MGP_129S1SvImJ_G0029180.1 mouse_genomes_project 4 156438590 156445801 + MGP_129S1SvImJ_P0069563 Rpl22 protein_coding protein_coding MGP_129S1SvImJ_T0069564.1 MGP_129S1SvImJ_G0029180.1 mouse_genomes_project 4 156438604 156447394 + MGP_129S1SvImJ_P0069564 Rpl22 protein_coding protein_coding MGP_129S1SvImJ_T0069565.1 MGP_129S1SvImJ_G0029180.1 mouse_genomes_project 4 156438606 156447393 + MGP_129S1SvImJ_P0069565 Rpl22 protein_coding protein_coding MGP_129S1SvImJ_T0069566.1 MGP_129S1SvImJ_G0029180.1 mouse_genomes_project 4 156439804 156442785 + Rpl22 protein_coding processed_transcript MGP_129S1SvImJ_T0069567.1 MGP_129S1SvImJ_G0029180.1 mouse_genomes_project 4 156439863 156443014 + Rpl22 protein_coding processed_transcript MGP_129S1SvImJ_T0069568.1 MGP_129S1SvImJ_G0029180.1 mouse_genomes_project 4 156440211 156445794 + Rpl22 protein_coding processed_transcript MGP_129S1SvImJ_T0069569.1 MGP_129S1SvImJ_G0029180.1 mouse_genomes_project 4 156440288 156445795 + Rpl22 protein_coding processed_transcript MGP_129S1SvImJ_T0069744.1 MGP_129S1SvImJ_G0029211.1 mouse_genomes_project 4 159573553 159668394 - MGP_129S1SvImJ_P0069744 Prkcz protein_coding protein_coding MGP_129S1SvImJ_T0069745.1 MGP_129S1SvImJ_G0029211.1 mouse_genomes_project 4 159576161 159684242 - MGP_129S1SvImJ_P0069745 Prkcz protein_coding protein_coding MGP_129S1SvImJ_T0069746.1 MGP_129S1SvImJ_G0029211.1 mouse_genomes_project 4 159585567 159587477 - Prkcz protein_coding processed_transcript MGP_129S1SvImJ_T0069747.1 MGP_129S1SvImJ_G0029211.1 mouse_genomes_project 4 159585607 159684103 - MGP_129S1SvImJ_P0069747 Prkcz protein_coding protein_coding MGP_129S1SvImJ_T0069748.1 MGP_129S1SvImJ_G0029211.1 mouse_genomes_project 4 159610177 159667787 - MGP_129S1SvImJ_P0069748 Prkcz protein_coding protein_coding MGP_129S1SvImJ_T0069749.1 MGP_129S1SvImJ_G0029211.1 mouse_genomes_project 4 159610180 159667884 - Prkcz protein_coding processed_transcript MGP_129S1SvImJ_T0069750.1 MGP_129S1SvImJ_G0029211.1 mouse_genomes_project 4 159613773 159620690 - Prkcz protein_coding processed_transcript MGP_129S1SvImJ_T0069751.1 MGP_129S1SvImJ_G0029211.1 mouse_genomes_project 4 159613848 159667362 - Prkcz protein_coding processed_transcript MGP_129S1SvImJ_T0069752.1 MGP_129S1SvImJ_G0029211.1 mouse_genomes_project 4 159679133 159684221 - MGP_129S1SvImJ_P0069752 Prkcz protein_coding protein_coding MGP_129S1SvImJ_T0065924.1 MGP_129S1SvImJ_G0028348.1 mouse_genomes_project 4 61277874 61308574 - Fkbp15 protein_coding processed_transcript MGP_129S1SvImJ_T0065925.1 MGP_129S1SvImJ_G0028348.1 mouse_genomes_project 4 61277874 61340416 - MGP_129S1SvImJ_P0065925 Fkbp15 protein_coding protein_coding MGP_129S1SvImJ_T0065926.1 MGP_129S1SvImJ_G0028348.1 mouse_genomes_project 4 61287039 61340494 - MGP_129S1SvImJ_P0065926 Fkbp15 protein_coding protein_coding MGP_129S1SvImJ_T0065927.1 MGP_129S1SvImJ_G0028348.1 mouse_genomes_project 4 61294393 61340440 - MGP_129S1SvImJ_P0065927 Fkbp15 protein_coding protein_coding MGP_129S1SvImJ_T0065928.1 MGP_129S1SvImJ_G0028348.1 mouse_genomes_project 4 61296409 61340480 - MGP_129S1SvImJ_P0065928 Fkbp15 protein_coding protein_coding MGP_129S1SvImJ_T0065929.1 MGP_129S1SvImJ_G0028348.1 mouse_genomes_project 4 61321949 61340415 - Fkbp15 protein_coding processed_transcript MGP_129S1SvImJ_T0069357.1 MGP_129S1SvImJ_G0029143.1 mouse_genomes_project 4 153448505 153525449 + MGP_129S1SvImJ_P0069357 Clstn1 protein_coding protein_coding MGP_129S1SvImJ_T0069358.1 MGP_129S1SvImJ_G0029143.1 mouse_genomes_project 4 153449099 153499641 + Clstn1 protein_coding processed_transcript MGP_129S1SvImJ_T0069359.1 MGP_129S1SvImJ_G0029143.1 mouse_genomes_project 4 153499445 153506410 + Clstn1 protein_coding retained_intron MGP_129S1SvImJ_T0065673.1 MGP_129S1SvImJ_G0028274.1 mouse_genomes_project 4 46855676 46897718 - MGP_129S1SvImJ_P0065673 Tex10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065674.1 MGP_129S1SvImJ_G0028274.1 mouse_genomes_project 4 46855676 46902005 - MGP_129S1SvImJ_P0065674 Tex10 protein_coding protein_coding MGP_129S1SvImJ_T0065675.1 MGP_129S1SvImJ_G0028274.1 mouse_genomes_project 4 46855774 46901968 - MGP_129S1SvImJ_P0065675 Tex10 protein_coding protein_coding MGP_129S1SvImJ_T0065676.1 MGP_129S1SvImJ_G0028274.1 mouse_genomes_project 4 46886972 46888107 - Tex10 protein_coding retained_intron MGP_129S1SvImJ_T0065677.1 MGP_129S1SvImJ_G0028274.1 mouse_genomes_project 4 46896500 46898790 - Tex10 protein_coding processed_transcript MGP_129S1SvImJ_T0065678.1 MGP_129S1SvImJ_G0028274.1 mouse_genomes_project 4 46898002 46901889 - Tex10 protein_coding retained_intron MGP_129S1SvImJ_T0065704.1 MGP_129S1SvImJ_G0028285.1 mouse_genomes_project 4 48065271 48078486 - MGP_129S1SvImJ_P0065704 Tmem246 protein_coding protein_coding MGP_129S1SvImJ_T0065705.1 MGP_129S1SvImJ_G0028285.1 mouse_genomes_project 4 48067531 48078080 - MGP_129S1SvImJ_P0065705 Tmem246 protein_coding protein_coding MGP_129S1SvImJ_T0065706.1 MGP_129S1SvImJ_G0028285.1 mouse_genomes_project 4 48067817 48074539 - MGP_129S1SvImJ_P0065706 Tmem246 protein_coding protein_coding MGP_129S1SvImJ_T0007929.1 MGP_129S1SvImJ_G0006485.1 mouse_genomes_project 4 107491772 107500071 - Gm12746 lincRNA lincRNA MGP_129S1SvImJ_T0065386.1 MGP_129S1SvImJ_G0028213.1 mouse_genomes_project 4 41684051 41688777 + MGP_129S1SvImJ_P0065386 Creb3 protein_coding protein_coding MGP_129S1SvImJ_T0065387.1 MGP_129S1SvImJ_G0028213.1 mouse_genomes_project 4 41684531 41688514 + MGP_129S1SvImJ_P0065387 Creb3 protein_coding protein_coding MGP_129S1SvImJ_T0065388.1 MGP_129S1SvImJ_G0028213.1 mouse_genomes_project 4 41684665 41687034 + MGP_129S1SvImJ_P0065388 Creb3 protein_coding protein_coding MGP_129S1SvImJ_T0065389.1 MGP_129S1SvImJ_G0028213.1 mouse_genomes_project 4 41684985 41688244 + Creb3 protein_coding retained_intron MGP_129S1SvImJ_T0065390.1 MGP_129S1SvImJ_G0028213.1 mouse_genomes_project 4 41685147 41687268 + Creb3 protein_coding retained_intron MGP_129S1SvImJ_T0065391.1 MGP_129S1SvImJ_G0028213.1 mouse_genomes_project 4 41687731 41688421 + Creb3 protein_coding retained_intron MGP_129S1SvImJ_T0064732.1 MGP_129S1SvImJ_G0028058.1 mouse_genomes_project 4 8654082 8662351 - MGP_129S1SvImJ_P0064732 Pdp1 protein_coding protein_coding MGP_129S1SvImJ_T0064733.1 MGP_129S1SvImJ_G0028058.1 mouse_genomes_project 4 8655705 8661880 - MGP_129S1SvImJ_P0064733 Pdp1 protein_coding protein_coding MGP_129S1SvImJ_T0064734.1 MGP_129S1SvImJ_G0028058.1 mouse_genomes_project 4 8655705 8661720 - MGP_129S1SvImJ_P0064734 Pdp1 protein_coding protein_coding MGP_129S1SvImJ_T0064735.1 MGP_129S1SvImJ_G0028058.1 mouse_genomes_project 4 8655705 8661826 - MGP_129S1SvImJ_P0064735 Pdp1 protein_coding protein_coding MGP_129S1SvImJ_T0064736.1 MGP_129S1SvImJ_G0028058.1 mouse_genomes_project 4 8655705 8662326 - MGP_129S1SvImJ_P0064736 Pdp1 protein_coding protein_coding MGP_129S1SvImJ_T0064737.1 MGP_129S1SvImJ_G0028058.1 mouse_genomes_project 4 8655709 8662319 - MGP_129S1SvImJ_P0064737 Pdp1 protein_coding protein_coding MGP_129S1SvImJ_T0064770.1 MGP_129S1SvImJ_G0028067.1 mouse_genomes_project 4 11440667 11599981 - MGP_129S1SvImJ_P0064770 Lrrc69 protein_coding protein_coding MGP_129S1SvImJ_T0064771.1 MGP_129S1SvImJ_G0028067.1 mouse_genomes_project 4 11479928 11562127 - Lrrc69 protein_coding processed_transcript MGP_129S1SvImJ_T0064772.1 MGP_129S1SvImJ_G0028067.1 mouse_genomes_project 4 11479928 11599973 - MGP_129S1SvImJ_P0064772 Lrrc69 protein_coding protein_coding MGP_129S1SvImJ_T0014761.1 MGP_129S1SvImJ_G0012850.1 mouse_genomes_project 4 120703780 120704462 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014598.1 MGP_129S1SvImJ_G0012687.1 mouse_genomes_project 4 62584818 62585065 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069145.1 MGP_129S1SvImJ_G0029097.1 mouse_genomes_project 4 148027178 148041859 - MGP_129S1SvImJ_P0069145 Gm436 protein_coding protein_coding MGP_129S1SvImJ_T0014562.1 MGP_129S1SvImJ_G0012651.1 mouse_genomes_project 4 50479404 50480643 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066711.1 MGP_129S1SvImJ_G0028533.1 mouse_genomes_project 4 107852483 107876532 + MGP_129S1SvImJ_P0066711 Tmem59 protein_coding protein_coding MGP_129S1SvImJ_T0066712.1 MGP_129S1SvImJ_G0028533.1 mouse_genomes_project 4 107852611 107864918 + MGP_129S1SvImJ_P0066712 Tmem59 protein_coding protein_coding MGP_129S1SvImJ_T0066713.1 MGP_129S1SvImJ_G0028533.1 mouse_genomes_project 4 107852611 107876234 + MGP_129S1SvImJ_P0066713 Tmem59 protein_coding protein_coding MGP_129S1SvImJ_T0066714.1 MGP_129S1SvImJ_G0028533.1 mouse_genomes_project 4 107852751 107865121 + Tmem59 protein_coding retained_intron MGP_129S1SvImJ_T0066715.1 MGP_129S1SvImJ_G0028533.1 mouse_genomes_project 4 107852810 107876042 + MGP_129S1SvImJ_P0066715 Tmem59 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066716.1 MGP_129S1SvImJ_G0028533.1 mouse_genomes_project 4 107853102 107876530 + Tmem59 protein_coding processed_transcript MGP_129S1SvImJ_T0099872.1 MGP_129S1SvImJ_G0037939.1 mouse_genomes_project 4 128842083 128842189 - Gm25600 snRNA snRNA MGP_129S1SvImJ_T0067743.1 MGP_129S1SvImJ_G0028767.1 mouse_genomes_project 4 127665867 127673038 + Csf3r protein_coding processed_transcript MGP_129S1SvImJ_T0067744.1 MGP_129S1SvImJ_G0028767.1 mouse_genomes_project 4 127668478 127692255 + MGP_129S1SvImJ_P0067744 Csf3r protein_coding protein_coding MGP_129S1SvImJ_T0067745.1 MGP_129S1SvImJ_G0028767.1 mouse_genomes_project 4 127679251 127691687 + Csf3r protein_coding processed_transcript MGP_129S1SvImJ_T0069675.1 MGP_129S1SvImJ_G0029199.1 mouse_genomes_project 4 159131058 159148313 + MGP_129S1SvImJ_P0069675 Ttc34 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0069676.1 MGP_129S1SvImJ_G0029199.1 mouse_genomes_project 4 159136939 159148306 + MGP_129S1SvImJ_P0069676 Ttc34 protein_coding protein_coding MGP_129S1SvImJ_T0069677.1 MGP_129S1SvImJ_G0029199.1 mouse_genomes_project 4 159141407 159142486 + Ttc34 protein_coding processed_transcript MGP_129S1SvImJ_T0007813.1 MGP_129S1SvImJ_G0006386.1 mouse_genomes_project 4 8676567 8684332 + Gm26895 lincRNA lincRNA MGP_129S1SvImJ_T0064594.1 MGP_129S1SvImJ_G0028031.1 mouse_genomes_project 4 1295518 1331056 - MGP_129S1SvImJ_P0064594 Impad1 protein_coding protein_coding MGP_129S1SvImJ_T0067118.1 MGP_129S1SvImJ_G0028617.1 mouse_genomes_project 4 116923746 116946347 + MGP_129S1SvImJ_P0067118 Lrrc41 protein_coding protein_coding MGP_129S1SvImJ_T0067119.1 MGP_129S1SvImJ_G0028617.1 mouse_genomes_project 4 116923940 116932363 + Lrrc41 protein_coding processed_transcript MGP_129S1SvImJ_T0067120.1 MGP_129S1SvImJ_G0028617.1 mouse_genomes_project 4 116924022 116937834 + Lrrc41 protein_coding processed_transcript MGP_129S1SvImJ_T0067121.1 MGP_129S1SvImJ_G0028617.1 mouse_genomes_project 4 116925362 116937903 + Lrrc41 protein_coding processed_transcript MGP_129S1SvImJ_T0067122.1 MGP_129S1SvImJ_G0028617.1 mouse_genomes_project 4 116927889 116932361 + Lrrc41 protein_coding processed_transcript MGP_129S1SvImJ_T0067123.1 MGP_129S1SvImJ_G0028617.1 mouse_genomes_project 4 116938786 116942614 + Lrrc41 protein_coding processed_transcript MGP_129S1SvImJ_T0014589.1 MGP_129S1SvImJ_G0012678.1 mouse_genomes_project 4 57442059 57442476 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014806.1 MGP_129S1SvImJ_G0012895.1 mouse_genomes_project 4 135517371 135517796 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066371.1 MGP_129S1SvImJ_G0028458.1 mouse_genomes_project 4 96068548 96132456 + MGP_129S1SvImJ_P0066371 Hook1 protein_coding protein_coding MGP_129S1SvImJ_T0066372.1 MGP_129S1SvImJ_G0028458.1 mouse_genomes_project 4 96068671 96122524 + Hook1 protein_coding processed_transcript MGP_129S1SvImJ_T0066373.1 MGP_129S1SvImJ_G0028458.1 mouse_genomes_project 4 96068677 96101017 + MGP_129S1SvImJ_P0066373 Hook1 protein_coding protein_coding MGP_129S1SvImJ_T0066374.1 MGP_129S1SvImJ_G0028458.1 mouse_genomes_project 4 96075657 96129383 + Hook1 protein_coding processed_transcript MGP_129S1SvImJ_T0066375.1 MGP_129S1SvImJ_G0028458.1 mouse_genomes_project 4 96103627 96129525 + Hook1 protein_coding processed_transcript MGP_129S1SvImJ_T0066376.1 MGP_129S1SvImJ_G0028458.1 mouse_genomes_project 4 96106086 96113770 + Hook1 protein_coding processed_transcript MGP_129S1SvImJ_T0066377.1 MGP_129S1SvImJ_G0028458.1 mouse_genomes_project 4 96107260 96114163 + Hook1 protein_coding processed_transcript MGP_129S1SvImJ_T0066378.1 MGP_129S1SvImJ_G0028458.1 mouse_genomes_project 4 96120339 96126667 + Hook1 protein_coding processed_transcript MGP_129S1SvImJ_T0066379.1 MGP_129S1SvImJ_G0028458.1 mouse_genomes_project 4 96123227 96124717 + Hook1 protein_coding processed_transcript MGP_129S1SvImJ_T0066380.1 MGP_129S1SvImJ_G0028458.1 mouse_genomes_project 4 96127051 96129272 + Hook1 protein_coding processed_transcript MGP_129S1SvImJ_T0066381.1 MGP_129S1SvImJ_G0028458.1 mouse_genomes_project 4 96128281 96132434 + Hook1 protein_coding processed_transcript MGP_129S1SvImJ_T0066389.1 MGP_129S1SvImJ_G0028462.1 mouse_genomes_project 4 96390900 96452084 - MGP_129S1SvImJ_P0066389 Cyp2j11 protein_coding protein_coding MGP_129S1SvImJ_T0065655.1 MGP_129S1SvImJ_G0028270.1 mouse_genomes_project 4 46460578 46502994 + MGP_129S1SvImJ_P0065655 Nr4a3 protein_coding protein_coding MGP_129S1SvImJ_T0065656.1 MGP_129S1SvImJ_G0028270.1 mouse_genomes_project 4 46460656 46465549 + Nr4a3 protein_coding processed_transcript MGP_129S1SvImJ_T0065657.1 MGP_129S1SvImJ_G0028270.1 mouse_genomes_project 4 46464497 46502995 + MGP_129S1SvImJ_P0065657 Nr4a3 protein_coding protein_coding MGP_129S1SvImJ_T0065658.1 MGP_129S1SvImJ_G0028270.1 mouse_genomes_project 4 46466631 46472123 + Nr4a3 protein_coding processed_transcript MGP_129S1SvImJ_T0007937.1 MGP_129S1SvImJ_G0006489.1 mouse_genomes_project 4 108663717 108670519 + 4930407G08Rik lincRNA lincRNA MGP_129S1SvImJ_T0065392.1 MGP_129S1SvImJ_G0028214.1 mouse_genomes_project 4 41688644 41700270 - Gba2 protein_coding retained_intron MGP_129S1SvImJ_T0065393.1 MGP_129S1SvImJ_G0028214.1 mouse_genomes_project 4 41688644 41699822 - Gba2 protein_coding retained_intron MGP_129S1SvImJ_T0065394.1 MGP_129S1SvImJ_G0028214.1 mouse_genomes_project 4 41688644 41700606 - MGP_129S1SvImJ_P0065394 Gba2 protein_coding protein_coding MGP_129S1SvImJ_T0065395.1 MGP_129S1SvImJ_G0028214.1 mouse_genomes_project 4 41688645 41699822 - Gba2 protein_coding retained_intron MGP_129S1SvImJ_T0065396.1 MGP_129S1SvImJ_G0028214.1 mouse_genomes_project 4 41690110 41691359 - Gba2 protein_coding retained_intron MGP_129S1SvImJ_T0065397.1 MGP_129S1SvImJ_G0028214.1 mouse_genomes_project 4 41692079 41695798 - Gba2 protein_coding processed_transcript MGP_129S1SvImJ_T0065398.1 MGP_129S1SvImJ_G0028214.1 mouse_genomes_project 4 41692493 41700369 - MGP_129S1SvImJ_P0065398 Gba2 protein_coding protein_coding MGP_129S1SvImJ_T0069256.1 MGP_129S1SvImJ_G0029127.1 mouse_genomes_project 4 152330424 152333547 + MGP_129S1SvImJ_P0069256 Srm protein_coding protein_coding MGP_129S1SvImJ_T0069257.1 MGP_129S1SvImJ_G0029127.1 mouse_genomes_project 4 152330838 152333127 + Srm protein_coding retained_intron MGP_129S1SvImJ_T0069258.1 MGP_129S1SvImJ_G0029127.1 mouse_genomes_project 4 152332821 152333921 + Srm protein_coding processed_transcript MGP_129S1SvImJ_T0068657.1 MGP_129S1SvImJ_G0028959.1 mouse_genomes_project 4 138530317 138530846 - Gm5093 protein_coding processed_transcript MGP_129S1SvImJ_T0068658.1 MGP_129S1SvImJ_G0028959.1 mouse_genomes_project 4 138530317 138561834 - Gm5093 protein_coding processed_transcript MGP_129S1SvImJ_T0068659.1 MGP_129S1SvImJ_G0028959.1 mouse_genomes_project 4 138555293 138562543 - MGP_129S1SvImJ_P0068659 Gm5093 protein_coding protein_coding MGP_129S1SvImJ_T0068660.1 MGP_129S1SvImJ_G0028959.1 mouse_genomes_project 4 138555509 138556085 - Gm5093 protein_coding processed_transcript MGP_129S1SvImJ_T0068661.1 MGP_129S1SvImJ_G0028959.1 mouse_genomes_project 4 138555549 138561839 - MGP_129S1SvImJ_P0068661 Gm5093 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0068662.1 MGP_129S1SvImJ_G0028959.1 mouse_genomes_project 4 138555552 138562145 - Gm5093 protein_coding processed_transcript MGP_129S1SvImJ_T0068663.1 MGP_129S1SvImJ_G0028959.1 mouse_genomes_project 4 138555842 138562239 - MGP_129S1SvImJ_P0068663 Gm5093 protein_coding protein_coding MGP_129S1SvImJ_T0068664.1 MGP_129S1SvImJ_G0028959.1 mouse_genomes_project 4 138555894 138561903 - Gm5093 protein_coding processed_transcript MGP_129S1SvImJ_T0068665.1 MGP_129S1SvImJ_G0028959.1 mouse_genomes_project 4 138556191 138561855 - Gm5093 protein_coding processed_transcript MGP_129S1SvImJ_T0068666.1 MGP_129S1SvImJ_G0028959.1 mouse_genomes_project 4 138556587 138561865 - Gm5093 protein_coding processed_transcript MGP_129S1SvImJ_T0068667.1 MGP_129S1SvImJ_G0028959.1 mouse_genomes_project 4 138560359 138562578 - Gm5093 protein_coding processed_transcript MGP_129S1SvImJ_T0066054.1 MGP_129S1SvImJ_G0028383.1 mouse_genomes_project 4 70980882 70984276 - MGP_129S1SvImJ_P0066054 Gm11232 protein_coding protein_coding MGP_129S1SvImJ_T0010656.1 MGP_129S1SvImJ_G0008772.1 mouse_genomes_project 4 139788840 139788916 + Gm25399 miRNA miRNA MGP_129S1SvImJ_T0067831.1 MGP_129S1SvImJ_G0028787.1 mouse_genomes_project 4 128454254 128465288 - MGP_129S1SvImJ_P0067831 Ncdn protein_coding protein_coding MGP_129S1SvImJ_T0067832.1 MGP_129S1SvImJ_G0028787.1 mouse_genomes_project 4 128455235 128465317 - Ncdn protein_coding processed_transcript MGP_129S1SvImJ_T0067833.1 MGP_129S1SvImJ_G0028787.1 mouse_genomes_project 4 128455235 128465306 - MGP_129S1SvImJ_P0067833 Ncdn protein_coding protein_coding MGP_129S1SvImJ_T0069723.1 MGP_129S1SvImJ_G0029208.1 mouse_genomes_project 4 159377209 159448052 + MGP_129S1SvImJ_P0069723 Morn1 protein_coding protein_coding MGP_129S1SvImJ_T0069724.1 MGP_129S1SvImJ_G0029208.1 mouse_genomes_project 4 159377209 159407594 + MGP_129S1SvImJ_P0069724 Morn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069725.1 MGP_129S1SvImJ_G0029208.1 mouse_genomes_project 4 159377221 159385273 + MGP_129S1SvImJ_P0069725 Morn1 protein_coding protein_coding MGP_129S1SvImJ_T0069726.1 MGP_129S1SvImJ_G0029208.1 mouse_genomes_project 4 159377235 159385554 + MGP_129S1SvImJ_P0069726 Morn1 protein_coding protein_coding MGP_129S1SvImJ_T0069727.1 MGP_129S1SvImJ_G0029208.1 mouse_genomes_project 4 159377246 159442083 + Morn1 protein_coding processed_transcript MGP_129S1SvImJ_T0069728.1 MGP_129S1SvImJ_G0029208.1 mouse_genomes_project 4 159377260 159442061 + Morn1 protein_coding processed_transcript MGP_129S1SvImJ_T0069729.1 MGP_129S1SvImJ_G0029208.1 mouse_genomes_project 4 159394371 159428655 + Morn1 protein_coding retained_intron MGP_129S1SvImJ_T0069730.1 MGP_129S1SvImJ_G0029208.1 mouse_genomes_project 4 159406102 159428219 + Morn1 protein_coding retained_intron MGP_129S1SvImJ_T0066789.1 MGP_129S1SvImJ_G0028545.1 mouse_genomes_project 4 108608380 108628079 - MGP_129S1SvImJ_P0066789 Cpt2 protein_coding protein_coding MGP_129S1SvImJ_T0066790.1 MGP_129S1SvImJ_G0028545.1 mouse_genomes_project 4 108608382 108628029 - MGP_129S1SvImJ_P0066790 Cpt2 protein_coding protein_coding MGP_129S1SvImJ_T0066791.1 MGP_129S1SvImJ_G0028545.1 mouse_genomes_project 4 108612119 108628014 - MGP_129S1SvImJ_P0066791 Cpt2 protein_coding protein_coding MGP_129S1SvImJ_T0066792.1 MGP_129S1SvImJ_G0028545.1 mouse_genomes_project 4 108612206 108617245 - Cpt2 protein_coding retained_intron MGP_129S1SvImJ_T0066793.1 MGP_129S1SvImJ_G0028545.1 mouse_genomes_project 4 108612353 108627916 - Cpt2 protein_coding processed_transcript MGP_129S1SvImJ_T0066794.1 MGP_129S1SvImJ_G0028545.1 mouse_genomes_project 4 108612708 108628057 - MGP_129S1SvImJ_P0066794 Cpt2 protein_coding protein_coding MGP_129S1SvImJ_T0014565.1 MGP_129S1SvImJ_G0012654.1 mouse_genomes_project 4 50938992 50940381 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065234.1 MGP_129S1SvImJ_G0028194.1 mouse_genomes_project 4 41022743 41023574 + Dnajb5 protein_coding processed_transcript MGP_129S1SvImJ_T0065235.1 MGP_129S1SvImJ_G0028194.1 mouse_genomes_project 4 41023180 41032915 + Dnajb5 protein_coding retained_intron MGP_129S1SvImJ_T0065236.1 MGP_129S1SvImJ_G0028194.1 mouse_genomes_project 4 41023269 41026132 + Dnajb5 protein_coding processed_transcript MGP_129S1SvImJ_T0065237.1 MGP_129S1SvImJ_G0028194.1 mouse_genomes_project 4 41023591 41032921 + MGP_129S1SvImJ_P0065237 Dnajb5 protein_coding protein_coding MGP_129S1SvImJ_T0065238.1 MGP_129S1SvImJ_G0028194.1 mouse_genomes_project 4 41025923 41032906 + MGP_129S1SvImJ_P0065238 Dnajb5 protein_coding protein_coding MGP_129S1SvImJ_T0010585.1 MGP_129S1SvImJ_G0008701.1 mouse_genomes_project 4 7780678 7780764 + Mir684-2 miRNA miRNA MGP_129S1SvImJ_T0068937.1 MGP_129S1SvImJ_G0029027.1 mouse_genomes_project 4 143654569 143688607 + MGP_129S1SvImJ_P0068937 Rcc2 protein_coding protein_coding MGP_129S1SvImJ_T0068938.1 MGP_129S1SvImJ_G0029027.1 mouse_genomes_project 4 143654604 143688609 + MGP_129S1SvImJ_P0068938 Rcc2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0068939.1 MGP_129S1SvImJ_G0029027.1 mouse_genomes_project 4 143655500 143667536 + MGP_129S1SvImJ_P0068939 Rcc2 protein_coding protein_coding MGP_129S1SvImJ_T0068940.1 MGP_129S1SvImJ_G0029027.1 mouse_genomes_project 4 143655500 143688607 + MGP_129S1SvImJ_P0068940 Rcc2 protein_coding protein_coding MGP_129S1SvImJ_T0068941.1 MGP_129S1SvImJ_G0029027.1 mouse_genomes_project 4 143671479 143674109 + Rcc2 protein_coding processed_transcript MGP_129S1SvImJ_T0068942.1 MGP_129S1SvImJ_G0029027.1 mouse_genomes_project 4 143671506 143674017 + Rcc2 protein_coding processed_transcript MGP_129S1SvImJ_T0069212.1 MGP_129S1SvImJ_G0029117.1 mouse_genomes_project 4 151786449 151818702 - MGP_129S1SvImJ_P0069212 Draxin protein_coding protein_coding MGP_129S1SvImJ_T0101092.1 MGP_129S1SvImJ_G0039159.1 mouse_genomes_project 4 11020360 11020487 + Gm24908 snoRNA snoRNA MGP_129S1SvImJ_T0064556.1 MGP_129S1SvImJ_G0028022.1 mouse_genomes_project 4 38557 80859 + MGP_129S1SvImJ_P0064556 Tgs1 protein_coding protein_coding MGP_129S1SvImJ_T0064557.1 MGP_129S1SvImJ_G0028022.1 mouse_genomes_project 4 38632 47611 + Tgs1 protein_coding retained_intron MGP_129S1SvImJ_T0064558.1 MGP_129S1SvImJ_G0028022.1 mouse_genomes_project 4 47104 80857 + MGP_129S1SvImJ_P0064558 Tgs1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0064559.1 MGP_129S1SvImJ_G0028022.1 mouse_genomes_project 4 58252 63352 + Tgs1 protein_coding processed_transcript MGP_129S1SvImJ_T0064560.1 MGP_129S1SvImJ_G0028022.1 mouse_genomes_project 4 63299 67392 + Tgs1 protein_coding retained_intron MGP_129S1SvImJ_T0064561.1 MGP_129S1SvImJ_G0028022.1 mouse_genomes_project 4 70478 79524 + Tgs1 protein_coding retained_intron MGP_129S1SvImJ_T0065117.1 MGP_129S1SvImJ_G0028159.1 mouse_genomes_project 4 39289980 39336150 + MGP_129S1SvImJ_P0065117 Ubap1 protein_coding protein_coding MGP_129S1SvImJ_T0065118.1 MGP_129S1SvImJ_G0028159.1 mouse_genomes_project 4 39289980 39335391 + MGP_129S1SvImJ_P0065118 Ubap1 protein_coding protein_coding MGP_129S1SvImJ_T0065119.1 MGP_129S1SvImJ_G0028159.1 mouse_genomes_project 4 39290032 39315679 + Ubap1 protein_coding processed_transcript MGP_129S1SvImJ_T0065120.1 MGP_129S1SvImJ_G0028159.1 mouse_genomes_project 4 39315641 39323685 + Ubap1 protein_coding processed_transcript MGP_129S1SvImJ_T0065121.1 MGP_129S1SvImJ_G0028159.1 mouse_genomes_project 4 39316118 39334317 + MGP_129S1SvImJ_P0065121 Ubap1 protein_coding protein_coding MGP_129S1SvImJ_T0102541.1 MGP_129S1SvImJ_G0040374.1 mouse_genomes_project 4 122704857 122708284 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0065774.1 MGP_129S1SvImJ_G0028305.1 mouse_genomes_project 4 54053197 54098344 + MGP_129S1SvImJ_P0065774 Rad23b protein_coding protein_coding MGP_129S1SvImJ_T0065775.1 MGP_129S1SvImJ_G0028305.1 mouse_genomes_project 4 54053204 54071858 + Rad23b protein_coding processed_transcript MGP_129S1SvImJ_T0065776.1 MGP_129S1SvImJ_G0028305.1 mouse_genomes_project 4 54053206 54054339 + Rad23b protein_coding processed_transcript MGP_129S1SvImJ_T0065777.1 MGP_129S1SvImJ_G0028305.1 mouse_genomes_project 4 54053244 54087345 + Rad23b protein_coding processed_transcript MGP_129S1SvImJ_T0065156.1 MGP_129S1SvImJ_G0028169.1 mouse_genomes_project 4 39680580 39688953 - MGP_129S1SvImJ_P0065156 Dctn3 protein_coding protein_coding MGP_129S1SvImJ_T0065157.1 MGP_129S1SvImJ_G0028169.1 mouse_genomes_project 4 39680580 39688946 - MGP_129S1SvImJ_P0065157 Dctn3 protein_coding protein_coding MGP_129S1SvImJ_T0065158.1 MGP_129S1SvImJ_G0028169.1 mouse_genomes_project 4 39685550 39688920 - Dctn3 protein_coding processed_transcript MGP_129S1SvImJ_T0098930.1 MGP_129S1SvImJ_G0037008.1 mouse_genomes_project 4 29698806 29712903 + Bach2it1 sense_intronic sense_intronic MGP_129S1SvImJ_T0066302.1 MGP_129S1SvImJ_G0028442.1 mouse_genomes_project 4 89267080 89271849 - MGP_129S1SvImJ_P0066302 Cdkn2b protein_coding protein_coding MGP_129S1SvImJ_T0007837.1 MGP_129S1SvImJ_G0006409.1 mouse_genomes_project 4 38171687 38176175 + 4930509K18Rik lincRNA lincRNA MGP_129S1SvImJ_T0066523.1 MGP_129S1SvImJ_G0028494.1 mouse_genomes_project 4 101964855 101977509 + MGP_129S1SvImJ_P0066523 Leprot protein_coding protein_coding MGP_129S1SvImJ_T0066524.1 MGP_129S1SvImJ_G0028494.1 mouse_genomes_project 4 101964930 101977509 + MGP_129S1SvImJ_P0066524 Leprot protein_coding protein_coding MGP_129S1SvImJ_T0014574.1 MGP_129S1SvImJ_G0012663.1 mouse_genomes_project 4 52908377 52908584 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066511.1 MGP_129S1SvImJ_G0028492.1 mouse_genomes_project 4 101724082 101780932 + MGP_129S1SvImJ_P0066511 Ak4 protein_coding protein_coding MGP_129S1SvImJ_T0066512.1 MGP_129S1SvImJ_G0028492.1 mouse_genomes_project 4 101724094 101780932 + MGP_129S1SvImJ_P0066512 Ak4 protein_coding protein_coding MGP_129S1SvImJ_T0066513.1 MGP_129S1SvImJ_G0028492.1 mouse_genomes_project 4 101724124 101780932 + MGP_129S1SvImJ_P0066513 Ak4 protein_coding protein_coding MGP_129S1SvImJ_T0066514.1 MGP_129S1SvImJ_G0028492.1 mouse_genomes_project 4 101724511 101772512 + MGP_129S1SvImJ_P0066514 Ak4 protein_coding protein_coding MGP_129S1SvImJ_T0066515.1 MGP_129S1SvImJ_G0028492.1 mouse_genomes_project 4 101724538 101774931 + MGP_129S1SvImJ_P0066515 Ak4 protein_coding protein_coding MGP_129S1SvImJ_T0066516.1 MGP_129S1SvImJ_G0028492.1 mouse_genomes_project 4 101725302 101777617 + Ak4 protein_coding processed_transcript MGP_129S1SvImJ_T0066517.1 MGP_129S1SvImJ_G0028492.1 mouse_genomes_project 4 101754570 101777716 + MGP_129S1SvImJ_P0066517 Ak4 protein_coding protein_coding MGP_129S1SvImJ_T0068593.1 MGP_129S1SvImJ_G0028943.1 mouse_genomes_project 4 137846574 137871554 - MGP_129S1SvImJ_P0068593 Rcan3 protein_coding protein_coding MGP_129S1SvImJ_T0068594.1 MGP_129S1SvImJ_G0028943.1 mouse_genomes_project 4 137846575 137863128 - MGP_129S1SvImJ_P0068594 Rcan3 protein_coding protein_coding MGP_129S1SvImJ_T0068595.1 MGP_129S1SvImJ_G0028943.1 mouse_genomes_project 4 137852700 137871524 - MGP_129S1SvImJ_P0068595 Rcan3 protein_coding protein_coding MGP_129S1SvImJ_T0004480.1 MGP_129S1SvImJ_G0003906.1 mouse_genomes_project 4 61082442 61089764 + Gm12910 antisense antisense MGP_129S1SvImJ_T0014678.1 MGP_129S1SvImJ_G0012767.1 mouse_genomes_project 4 93831107 93831365 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065592.1 MGP_129S1SvImJ_G0028254.1 mouse_genomes_project 4 44436907 44479336 - MGP_129S1SvImJ_P0065592 Xpa protein_coding protein_coding MGP_129S1SvImJ_T0065595.1 MGP_129S1SvImJ_G0028254.1 mouse_genomes_project 4 44458472 44468938 - Xpa protein_coding processed_transcript MGP_129S1SvImJ_T0065596.1 MGP_129S1SvImJ_G0028254.1 mouse_genomes_project 4 44458472 44468905 - MGP_129S1SvImJ_P0065596 Xpa protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065597.1 MGP_129S1SvImJ_G0028254.1 mouse_genomes_project 4 44458472 44479336 - MGP_129S1SvImJ_P0065597 Xpa protein_coding protein_coding MGP_129S1SvImJ_T0065598.1 MGP_129S1SvImJ_G0028254.1 mouse_genomes_project 4 44466224 44479329 - MGP_129S1SvImJ_P0065598 Xpa protein_coding protein_coding MGP_129S1SvImJ_T0065599.1 MGP_129S1SvImJ_G0028254.1 mouse_genomes_project 4 44467667 44469832 - Xpa protein_coding processed_transcript MGP_129S1SvImJ_T0102543.1 MGP_129S1SvImJ_G0040376.1 mouse_genomes_project 4 123974467 124000595 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099828.1 MGP_129S1SvImJ_G0037895.1 mouse_genomes_project 4 42228181 42228293 - Gm22706 snRNA snRNA MGP_129S1SvImJ_T0014547.1 MGP_129S1SvImJ_G0012636.1 mouse_genomes_project 4 44729801 44730124 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068727.1 MGP_129S1SvImJ_G0028977.1 mouse_genomes_project 4 139577918 139647546 - MGP_129S1SvImJ_P0068727 Zbtb40 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0068728.1 MGP_129S1SvImJ_G0028977.1 mouse_genomes_project 4 139577921 139647462 - MGP_129S1SvImJ_P0068728 Zbtb40 protein_coding protein_coding MGP_129S1SvImJ_T0068729.1 MGP_129S1SvImJ_G0028977.1 mouse_genomes_project 4 139612661 139647568 - Zbtb40 protein_coding retained_intron MGP_129S1SvImJ_T0067570.1 MGP_129S1SvImJ_G0028715.1 mouse_genomes_project 4 122144859 122177318 + Rims3 protein_coding processed_transcript MGP_129S1SvImJ_T0067571.1 MGP_129S1SvImJ_G0028715.1 mouse_genomes_project 4 122144862 122190706 + MGP_129S1SvImJ_P0067571 Rims3 protein_coding protein_coding MGP_129S1SvImJ_T0067572.1 MGP_129S1SvImJ_G0028715.1 mouse_genomes_project 4 122152847 122190706 + MGP_129S1SvImJ_P0067572 Rims3 protein_coding protein_coding MGP_129S1SvImJ_T0067573.1 MGP_129S1SvImJ_G0028715.1 mouse_genomes_project 4 122170740 122185687 + MGP_129S1SvImJ_P0067573 Rims3 protein_coding protein_coding MGP_129S1SvImJ_T0007947.1 MGP_129S1SvImJ_G0006499.1 mouse_genomes_project 4 121884225 121891100 + Gm12860 lincRNA lincRNA MGP_129S1SvImJ_T0014638.1 MGP_129S1SvImJ_G0012727.1 mouse_genomes_project 4 78136775 78138052 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004611.1 MGP_129S1SvImJ_G0004003.1 mouse_genomes_project 4 153176526 153176971 + Ube4bos2 antisense antisense MGP_129S1SvImJ_T0065469.1 MGP_129S1SvImJ_G0028233.1 mouse_genomes_project 4 42277761 42323018 - MGP_129S1SvImJ_P0065469 Rnf38 protein_coding protein_coding MGP_129S1SvImJ_T0065470.1 MGP_129S1SvImJ_G0028233.1 mouse_genomes_project 4 42277764 42322736 - MGP_129S1SvImJ_P0065470 Rnf38 protein_coding protein_coding MGP_129S1SvImJ_T0065471.1 MGP_129S1SvImJ_G0028233.1 mouse_genomes_project 4 42280971 42313148 - MGP_129S1SvImJ_P0065471 Rnf38 protein_coding protein_coding MGP_129S1SvImJ_T0065472.1 MGP_129S1SvImJ_G0028233.1 mouse_genomes_project 4 42280975 42323058 - MGP_129S1SvImJ_P0065472 Rnf38 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065473.1 MGP_129S1SvImJ_G0028233.1 mouse_genomes_project 4 42281057 42295001 - Rnf38 protein_coding processed_transcript MGP_129S1SvImJ_T0065474.1 MGP_129S1SvImJ_G0028233.1 mouse_genomes_project 4 42281059 42294880 - Rnf38 protein_coding processed_transcript MGP_129S1SvImJ_T0065475.1 MGP_129S1SvImJ_G0028233.1 mouse_genomes_project 4 42296476 42306732 - MGP_129S1SvImJ_P0065475 Rnf38 protein_coding protein_coding MGP_129S1SvImJ_T0065476.1 MGP_129S1SvImJ_G0028233.1 mouse_genomes_project 4 42296530 42313259 - MGP_129S1SvImJ_P0065476 Rnf38 protein_coding protein_coding MGP_129S1SvImJ_T0065477.1 MGP_129S1SvImJ_G0028233.1 mouse_genomes_project 4 42296574 42323415 - MGP_129S1SvImJ_P0065477 Rnf38 protein_coding protein_coding MGP_129S1SvImJ_T0065478.1 MGP_129S1SvImJ_G0028233.1 mouse_genomes_project 4 42303289 42322945 - Rnf38 protein_coding processed_transcript MGP_129S1SvImJ_T0065479.1 MGP_129S1SvImJ_G0028233.1 mouse_genomes_project 4 42303296 42390599 - Rnf38 protein_coding processed_transcript MGP_129S1SvImJ_T0065480.1 MGP_129S1SvImJ_G0028233.1 mouse_genomes_project 4 42303325 42323332 - Rnf38 protein_coding processed_transcript MGP_129S1SvImJ_T0065481.1 MGP_129S1SvImJ_G0028233.1 mouse_genomes_project 4 42313177 42322902 - Rnf38 protein_coding processed_transcript MGP_129S1SvImJ_T0007806.1 MGP_129S1SvImJ_G0006383.1 mouse_genomes_project 4 7119485 7142038 - lincRNA lincRNA MGP_129S1SvImJ_T0007807.1 MGP_129S1SvImJ_G0006383.1 mouse_genomes_project 4 7140250 7429044 - lincRNA lincRNA MGP_129S1SvImJ_T0007808.1 MGP_129S1SvImJ_G0006383.1 mouse_genomes_project 4 7372225 7429028 - lincRNA lincRNA MGP_129S1SvImJ_T0007809.1 MGP_129S1SvImJ_G0006383.1 mouse_genomes_project 4 7372501 7429031 - lincRNA lincRNA MGP_129S1SvImJ_T0067967.1 MGP_129S1SvImJ_G0028816.1 mouse_genomes_project 4 131056899 131102570 + MGP_129S1SvImJ_P0067967 Yars protein_coding protein_coding MGP_129S1SvImJ_T0067968.1 MGP_129S1SvImJ_G0028816.1 mouse_genomes_project 4 131057044 131067304 + Yars protein_coding retained_intron MGP_129S1SvImJ_T0067969.1 MGP_129S1SvImJ_G0028816.1 mouse_genomes_project 4 131066977 131091630 + MGP_129S1SvImJ_P0067969 Yars protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067970.1 MGP_129S1SvImJ_G0028816.1 mouse_genomes_project 4 131067096 131089712 + Yars protein_coding processed_transcript MGP_129S1SvImJ_T0067971.1 MGP_129S1SvImJ_G0028816.1 mouse_genomes_project 4 131090634 131091904 + Yars protein_coding retained_intron MGP_129S1SvImJ_T0067972.1 MGP_129S1SvImJ_G0028816.1 mouse_genomes_project 4 131093290 131098689 + Yars protein_coding retained_intron MGP_129S1SvImJ_T0067973.1 MGP_129S1SvImJ_G0028816.1 mouse_genomes_project 4 131093742 131101626 + Yars protein_coding processed_transcript MGP_129S1SvImJ_T0067974.1 MGP_129S1SvImJ_G0028816.1 mouse_genomes_project 4 131096721 131097890 + Yars protein_coding retained_intron MGP_129S1SvImJ_T0067578.1 MGP_129S1SvImJ_G0028717.1 mouse_genomes_project 4 122233298 122247492 - MGP_129S1SvImJ_P0067578 Zfp69 protein_coding protein_coding MGP_129S1SvImJ_T0067579.1 MGP_129S1SvImJ_G0028717.1 mouse_genomes_project 4 122233514 122245229 - MGP_129S1SvImJ_P0067579 Zfp69 protein_coding protein_coding MGP_129S1SvImJ_T0067580.1 MGP_129S1SvImJ_G0028717.1 mouse_genomes_project 4 122234467 122243691 - MGP_129S1SvImJ_P0067580 Zfp69 protein_coding protein_coding MGP_129S1SvImJ_T0067581.1 MGP_129S1SvImJ_G0028717.1 mouse_genomes_project 4 122234468 122237851 - Zfp69 protein_coding retained_intron MGP_129S1SvImJ_T0069198.1 MGP_129S1SvImJ_G0029114.1 mouse_genomes_project 4 151692710 151727147 - MGP_129S1SvImJ_P0069198 Clcn6 protein_coding protein_coding MGP_129S1SvImJ_T0069199.1 MGP_129S1SvImJ_G0029114.1 mouse_genomes_project 4 151694601 151727139 - MGP_129S1SvImJ_P0069199 Clcn6 protein_coding protein_coding MGP_129S1SvImJ_T0069200.1 MGP_129S1SvImJ_G0029114.1 mouse_genomes_project 4 151695056 151727096 - MGP_129S1SvImJ_P0069200 Clcn6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069201.1 MGP_129S1SvImJ_G0029114.1 mouse_genomes_project 4 151712863 151727089 - Clcn6 protein_coding processed_transcript MGP_129S1SvImJ_T0069202.1 MGP_129S1SvImJ_G0029114.1 mouse_genomes_project 4 151714831 151726888 - MGP_129S1SvImJ_P0069202 Clcn6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069897.1 MGP_129S1SvImJ_G0029240.1 mouse_genomes_project 4 160321298 160325581 + MGP_129S1SvImJ_P0069897 Fam132a protein_coding protein_coding MGP_129S1SvImJ_T0069898.1 MGP_129S1SvImJ_G0029240.1 mouse_genomes_project 4 160323524 160324146 + Fam132a protein_coding processed_transcript MGP_129S1SvImJ_T0069899.1 MGP_129S1SvImJ_G0029240.1 mouse_genomes_project 4 160324060 160325573 + Fam132a protein_coding processed_transcript MGP_129S1SvImJ_T0099813.1 MGP_129S1SvImJ_G0037880.1 mouse_genomes_project 4 22941565 22941668 - Gm24042 snRNA snRNA MGP_129S1SvImJ_T0014720.1 MGP_129S1SvImJ_G0012809.1 mouse_genomes_project 4 108015383 108016394 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007832.1 MGP_129S1SvImJ_G0006404.1 mouse_genomes_project 4 28082140 28225286 + 4930556G01Rik lincRNA lincRNA MGP_129S1SvImJ_T0065364.1 MGP_129S1SvImJ_G0028210.1 mouse_genomes_project 4 41626693 41633719 + MGP_129S1SvImJ_P0065364 Car9 protein_coding protein_coding MGP_129S1SvImJ_T0065365.1 MGP_129S1SvImJ_G0028210.1 mouse_genomes_project 4 41626712 41634338 + Car9 protein_coding processed_transcript MGP_129S1SvImJ_T0065366.1 MGP_129S1SvImJ_G0028210.1 mouse_genomes_project 4 41627000 41633667 + MGP_129S1SvImJ_P0065366 Car9 protein_coding protein_coding MGP_129S1SvImJ_T0065367.1 MGP_129S1SvImJ_G0028210.1 mouse_genomes_project 4 41627571 41628702 + Car9 protein_coding processed_transcript MGP_129S1SvImJ_T0065368.1 MGP_129S1SvImJ_G0028210.1 mouse_genomes_project 4 41628258 41628763 + Car9 protein_coding processed_transcript MGP_129S1SvImJ_T0065369.1 MGP_129S1SvImJ_G0028210.1 mouse_genomes_project 4 41628664 41633064 + Car9 protein_coding processed_transcript MGP_129S1SvImJ_T0065370.1 MGP_129S1SvImJ_G0028210.1 mouse_genomes_project 4 41632740 41633551 + Car9 protein_coding processed_transcript MGP_129S1SvImJ_T0004635.1 MGP_129S1SvImJ_G0004022.1 mouse_genomes_project 4 160119176 160131495 + Atad3aos antisense antisense MGP_129S1SvImJ_T0004636.1 MGP_129S1SvImJ_G0004022.1 mouse_genomes_project 4 160119190 160120258 + Atad3aos antisense antisense MGP_129S1SvImJ_T0004637.1 MGP_129S1SvImJ_G0004022.1 mouse_genomes_project 4 160119208 160121547 + Atad3aos antisense antisense MGP_129S1SvImJ_T0004638.1 MGP_129S1SvImJ_G0004022.1 mouse_genomes_project 4 160119219 160121558 + Atad3aos antisense antisense MGP_129S1SvImJ_T0065999.1 MGP_129S1SvImJ_G0028366.1 mouse_genomes_project 4 62367301 62370721 + MGP_129S1SvImJ_P0065999 Orm2 protein_coding protein_coding MGP_129S1SvImJ_T0067022.1 MGP_129S1SvImJ_G0028589.1 mouse_genomes_project 4 115571505 115609131 + MGP_129S1SvImJ_P0067022 Gm12830 protein_coding protein_coding MGP_129S1SvImJ_T0069638.1 MGP_129S1SvImJ_G0029192.1 mouse_genomes_project 4 158390727 158405752 + MGP_129S1SvImJ_P0069638 Wrap73 protein_coding protein_coding MGP_129S1SvImJ_T0069639.1 MGP_129S1SvImJ_G0029192.1 mouse_genomes_project 4 158390764 158405752 + Wrap73 protein_coding processed_transcript MGP_129S1SvImJ_T0069640.1 MGP_129S1SvImJ_G0029192.1 mouse_genomes_project 4 158400870 158404213 + MGP_129S1SvImJ_P0069640 Wrap73 protein_coding protein_coding MGP_129S1SvImJ_T0069641.1 MGP_129S1SvImJ_G0029192.1 mouse_genomes_project 4 158404147 158420843 + Wrap73 protein_coding processed_transcript MGP_129S1SvImJ_T0069489.1 MGP_129S1SvImJ_G0029168.1 mouse_genomes_project 4 156116941 156126070 - MGP_129S1SvImJ_P0069489 Zbtb48 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069490.1 MGP_129S1SvImJ_G0029168.1 mouse_genomes_project 4 156116941 156126070 - MGP_129S1SvImJ_P0069490 Zbtb48 protein_coding protein_coding MGP_129S1SvImJ_T0069491.1 MGP_129S1SvImJ_G0029168.1 mouse_genomes_project 4 156116943 156126080 - Zbtb48 protein_coding retained_intron MGP_129S1SvImJ_T0069492.1 MGP_129S1SvImJ_G0029168.1 mouse_genomes_project 4 156116967 156117784 - Zbtb48 protein_coding processed_transcript MGP_129S1SvImJ_T0069493.1 MGP_129S1SvImJ_G0029168.1 mouse_genomes_project 4 156118254 156119252 - Zbtb48 protein_coding processed_transcript MGP_129S1SvImJ_T0069494.1 MGP_129S1SvImJ_G0029168.1 mouse_genomes_project 4 156118737 156124853 - MGP_129S1SvImJ_P0069494 Zbtb48 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069495.1 MGP_129S1SvImJ_G0029168.1 mouse_genomes_project 4 156119631 156124456 - Zbtb48 protein_coding retained_intron MGP_129S1SvImJ_T0069496.1 MGP_129S1SvImJ_G0029168.1 mouse_genomes_project 4 156124886 156126046 - MGP_129S1SvImJ_P0069496 Zbtb48 protein_coding protein_coding MGP_129S1SvImJ_T0099836.1 MGP_129S1SvImJ_G0037903.1 mouse_genomes_project 4 62653173 62653280 - Gm24234 snRNA snRNA MGP_129S1SvImJ_T0067536.1 MGP_129S1SvImJ_G0028706.1 mouse_genomes_project 4 121392637 121399901 + MGP_129S1SvImJ_P0067536 Edn2 protein_coding protein_coding MGP_129S1SvImJ_T0014593.1 MGP_129S1SvImJ_G0012682.1 mouse_genomes_project 4 58436923 58437191 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014454.1 MGP_129S1SvImJ_G0012543.1 mouse_genomes_project 4 16273601 16274449 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007871.1 MGP_129S1SvImJ_G0006436.1 mouse_genomes_project 4 57003283 57035477 + Gm26889 lincRNA lincRNA MGP_129S1SvImJ_T0067244.1 MGP_129S1SvImJ_G0028641.1 mouse_genomes_project 4 117969417 118029379 + MGP_129S1SvImJ_P0067244 Eif2b3 protein_coding protein_coding MGP_129S1SvImJ_T0067245.1 MGP_129S1SvImJ_G0028641.1 mouse_genomes_project 4 117969421 118042632 + MGP_129S1SvImJ_P0067245 Eif2b3 protein_coding protein_coding MGP_129S1SvImJ_T0067246.1 MGP_129S1SvImJ_G0028641.1 mouse_genomes_project 4 117997813 118014316 + Eif2b3 protein_coding processed_transcript MGP_129S1SvImJ_T0067247.1 MGP_129S1SvImJ_G0028641.1 mouse_genomes_project 4 118022587 118030419 + Eif2b3 protein_coding processed_transcript MGP_129S1SvImJ_T0067248.1 MGP_129S1SvImJ_G0028641.1 mouse_genomes_project 4 118023579 118043197 + Eif2b3 protein_coding processed_transcript MGP_129S1SvImJ_T0067249.1 MGP_129S1SvImJ_G0028641.1 mouse_genomes_project 4 118037399 118042739 + Eif2b3 protein_coding processed_transcript MGP_129S1SvImJ_T0068388.1 MGP_129S1SvImJ_G0028902.1 mouse_genomes_project 4 135888353 135919009 - MGP_129S1SvImJ_P0068388 Zdhhc18 protein_coding protein_coding MGP_129S1SvImJ_T0068389.1 MGP_129S1SvImJ_G0028902.1 mouse_genomes_project 4 135891719 135898628 - Zdhhc18 protein_coding retained_intron MGP_129S1SvImJ_T0068390.1 MGP_129S1SvImJ_G0028902.1 mouse_genomes_project 4 135891789 135896094 - Zdhhc18 protein_coding processed_transcript MGP_129S1SvImJ_T0068391.1 MGP_129S1SvImJ_G0028902.1 mouse_genomes_project 4 135896375 135898403 - Zdhhc18 protein_coding retained_intron MGP_129S1SvImJ_T0068392.1 MGP_129S1SvImJ_G0028902.1 mouse_genomes_project 4 135910196 135940239 - Zdhhc18 protein_coding processed_transcript MGP_129S1SvImJ_T0011597.1 MGP_129S1SvImJ_G0009713.1 mouse_genomes_project 4 106565695 106566006 - Gm24363 misc_RNA misc_RNA MGP_129S1SvImJ_T0004564.1 MGP_129S1SvImJ_G0003967.1 mouse_genomes_project 4 134664383 134670481 - Gm12981 antisense antisense MGP_129S1SvImJ_T0014450.1 MGP_129S1SvImJ_G0012539.1 mouse_genomes_project 4 15463001 15463447 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014504.1 MGP_129S1SvImJ_G0012593.1 mouse_genomes_project 4 30370867 30371477 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010599.1 MGP_129S1SvImJ_G0008715.1 mouse_genomes_project 4 38611526 38611605 + Mir207 miRNA miRNA MGP_129S1SvImJ_T0014784.1 MGP_129S1SvImJ_G0012873.1 mouse_genomes_project 4 126252054 126252694 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066000.1 MGP_129S1SvImJ_G0028367.1 mouse_genomes_project 4 62372572 62409362 - MGP_129S1SvImJ_P0066000 Akna protein_coding protein_coding MGP_129S1SvImJ_T0066001.1 MGP_129S1SvImJ_G0028367.1 mouse_genomes_project 4 62385351 62386631 - Akna protein_coding processed_transcript MGP_129S1SvImJ_T0067396.1 MGP_129S1SvImJ_G0028667.1 mouse_genomes_project 4 119485049 119489557 + MGP_129S1SvImJ_P0067396 Elovl1 protein_coding protein_coding MGP_129S1SvImJ_T0067397.1 MGP_129S1SvImJ_G0028667.1 mouse_genomes_project 4 119485064 119485765 + Elovl1 protein_coding processed_transcript MGP_129S1SvImJ_T0067398.1 MGP_129S1SvImJ_G0028667.1 mouse_genomes_project 4 119485108 119488884 + Elovl1 protein_coding processed_transcript MGP_129S1SvImJ_T0067399.1 MGP_129S1SvImJ_G0028667.1 mouse_genomes_project 4 119485142 119488009 + Elovl1 protein_coding processed_transcript MGP_129S1SvImJ_T0069246.1 MGP_129S1SvImJ_G0029125.1 mouse_genomes_project 4 152217625 152222939 - MGP_129S1SvImJ_P0069246 Angptl7 protein_coding protein_coding MGP_129S1SvImJ_T0014770.1 MGP_129S1SvImJ_G0012859.1 mouse_genomes_project 4 122553283 122553656 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014671.1 MGP_129S1SvImJ_G0012760.1 mouse_genomes_project 4 91351631 91352195 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065436.1 MGP_129S1SvImJ_G0028223.1 mouse_genomes_project 4 41838308 41847558 - MGP_129S1SvImJ_P0065436 Olfr71 protein_coding protein_coding MGP_129S1SvImJ_T0065437.1 MGP_129S1SvImJ_G0028223.1 mouse_genomes_project 4 41838308 41839247 - MGP_129S1SvImJ_P0065437 Olfr71 protein_coding protein_coding MGP_129S1SvImJ_T0066538.1 MGP_129S1SvImJ_G0028500.1 mouse_genomes_project 4 102436843 102993770 + MGP_129S1SvImJ_P0066538 Pde4b protein_coding protein_coding MGP_129S1SvImJ_T0066539.1 MGP_129S1SvImJ_G0028500.1 mouse_genomes_project 4 102437025 102552759 + Pde4b protein_coding retained_intron MGP_129S1SvImJ_T0066540.1 MGP_129S1SvImJ_G0028500.1 mouse_genomes_project 4 102437041 102944089 + MGP_129S1SvImJ_P0066540 Pde4b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066541.1 MGP_129S1SvImJ_G0028500.1 mouse_genomes_project 4 102614598 102942416 + MGP_129S1SvImJ_P0066541 Pde4b protein_coding protein_coding MGP_129S1SvImJ_T0066542.1 MGP_129S1SvImJ_G0028500.1 mouse_genomes_project 4 102614859 102995196 + MGP_129S1SvImJ_P0066542 Pde4b protein_coding protein_coding MGP_129S1SvImJ_T0066543.1 MGP_129S1SvImJ_G0028500.1 mouse_genomes_project 4 102615086 102889714 + MGP_129S1SvImJ_P0066543 Pde4b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066544.1 MGP_129S1SvImJ_G0028500.1 mouse_genomes_project 4 102794179 102993473 + MGP_129S1SvImJ_P0066544 Pde4b protein_coding protein_coding MGP_129S1SvImJ_T0066545.1 MGP_129S1SvImJ_G0028500.1 mouse_genomes_project 4 102802708 102927658 + MGP_129S1SvImJ_P0066545 Pde4b protein_coding protein_coding MGP_129S1SvImJ_T0066546.1 MGP_129S1SvImJ_G0028500.1 mouse_genomes_project 4 102847701 102869568 + Pde4b protein_coding retained_intron MGP_129S1SvImJ_T0066547.1 MGP_129S1SvImJ_G0028500.1 mouse_genomes_project 4 102956584 102993784 + MGP_129S1SvImJ_P0066547 Pde4b protein_coding protein_coding MGP_129S1SvImJ_T0066548.1 MGP_129S1SvImJ_G0028500.1 mouse_genomes_project 4 102975496 102993640 + MGP_129S1SvImJ_P0066548 Pde4b protein_coding protein_coding MGP_129S1SvImJ_T0066549.1 MGP_129S1SvImJ_G0028500.1 mouse_genomes_project 4 102977661 102993798 + MGP_129S1SvImJ_P0066549 Pde4b protein_coding protein_coding MGP_129S1SvImJ_T0066550.1 MGP_129S1SvImJ_G0028500.1 mouse_genomes_project 4 102977781 102991373 + MGP_129S1SvImJ_P0066550 Pde4b protein_coding protein_coding MGP_129S1SvImJ_T0067425.1 MGP_129S1SvImJ_G0028677.1 mouse_genomes_project 4 119777769 119778708 + MGP_129S1SvImJ_P0067425 Olfr1341 protein_coding protein_coding MGP_129S1SvImJ_T0014837.1 MGP_129S1SvImJ_G0012926.1 mouse_genomes_project 4 147017835 147023451 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014744.1 MGP_129S1SvImJ_G0012833.1 mouse_genomes_project 4 117329674 117330091 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068153.1 MGP_129S1SvImJ_G0028851.1 mouse_genomes_project 4 132366080 132404094 + MGP_129S1SvImJ_P0068153 Snrnp40 protein_coding protein_coding MGP_129S1SvImJ_T0068154.1 MGP_129S1SvImJ_G0028851.1 mouse_genomes_project 4 132366142 132389441 + Snrnp40 protein_coding processed_transcript MGP_129S1SvImJ_T0068155.1 MGP_129S1SvImJ_G0028851.1 mouse_genomes_project 4 132370654 132374384 + Snrnp40 protein_coding processed_transcript MGP_129S1SvImJ_T0068156.1 MGP_129S1SvImJ_G0028851.1 mouse_genomes_project 4 132398893 132402703 + Snrnp40 protein_coding processed_transcript MGP_129S1SvImJ_T0067229.1 MGP_129S1SvImJ_G0028637.1 mouse_genomes_project 4 117753856 117755660 - MGP_129S1SvImJ_P0067229 Hpdl protein_coding protein_coding MGP_129S1SvImJ_T0014814.1 MGP_129S1SvImJ_G0012903.1 mouse_genomes_project 4 137837871 137838339 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065701.1 MGP_129S1SvImJ_G0028284.1 mouse_genomes_project 4 48018709 48032206 - MGP_129S1SvImJ_P0065701 Aldob protein_coding protein_coding MGP_129S1SvImJ_T0065702.1 MGP_129S1SvImJ_G0028284.1 mouse_genomes_project 4 48019751 48021588 - Aldob protein_coding processed_transcript MGP_129S1SvImJ_T0065703.1 MGP_129S1SvImJ_G0028284.1 mouse_genomes_project 4 48021258 48022620 - Aldob protein_coding processed_transcript MGP_129S1SvImJ_T0068958.1 MGP_129S1SvImJ_G0029034.1 mouse_genomes_project 4 143978491 143996516 + MGP_129S1SvImJ_P0068958 Atp13a2 protein_coding protein_coding MGP_129S1SvImJ_T0068959.1 MGP_129S1SvImJ_G0029034.1 mouse_genomes_project 4 143978518 143998743 + Atp13a2 protein_coding retained_intron MGP_129S1SvImJ_T0068960.1 MGP_129S1SvImJ_G0029034.1 mouse_genomes_project 4 143978608 143989807 + Atp13a2 protein_coding retained_intron MGP_129S1SvImJ_T0068961.1 MGP_129S1SvImJ_G0029034.1 mouse_genomes_project 4 143978685 143998749 + MGP_129S1SvImJ_P0068961 Atp13a2 protein_coding protein_coding MGP_129S1SvImJ_T0068962.1 MGP_129S1SvImJ_G0029034.1 mouse_genomes_project 4 143987240 143993362 + Atp13a2 protein_coding processed_transcript MGP_129S1SvImJ_T0068963.1 MGP_129S1SvImJ_G0029034.1 mouse_genomes_project 4 143987850 143992301 + Atp13a2 protein_coding processed_transcript MGP_129S1SvImJ_T0068964.1 MGP_129S1SvImJ_G0029034.1 mouse_genomes_project 4 143992138 143993518 + Atp13a2 protein_coding processed_transcript MGP_129S1SvImJ_T0068965.1 MGP_129S1SvImJ_G0029034.1 mouse_genomes_project 4 143995844 143998136 + Atp13a2 protein_coding retained_intron MGP_129S1SvImJ_T0101136.1 MGP_129S1SvImJ_G0039203.1 mouse_genomes_project 4 90989087 90989219 - Gm25244 snoRNA snoRNA MGP_129S1SvImJ_T0007926.1 MGP_129S1SvImJ_G0006483.1 mouse_genomes_project 4 106899751 106900738 + Gm12730 lincRNA lincRNA MGP_129S1SvImJ_T0014399.1 MGP_129S1SvImJ_G0012488.1 mouse_genomes_project 4 294814 295450 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011602.1 MGP_129S1SvImJ_G0009718.1 mouse_genomes_project 4 122454266 122454585 + Gm22982 misc_RNA misc_RNA MGP_129S1SvImJ_T0014655.1 MGP_129S1SvImJ_G0012744.1 mouse_genomes_project 4 84923386 84923698 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065918.1 MGP_129S1SvImJ_G0028346.1 mouse_genomes_project 4 61165994 61184936 - MGP_129S1SvImJ_P0065918 Zfp37 protein_coding protein_coding MGP_129S1SvImJ_T0065919.1 MGP_129S1SvImJ_G0028346.1 mouse_genomes_project 4 61167428 61184851 - MGP_129S1SvImJ_P0065919 Zfp37 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0065920.1 MGP_129S1SvImJ_G0028346.1 mouse_genomes_project 4 61167428 61184851 - MGP_129S1SvImJ_P0065920 Zfp37 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0065921.1 MGP_129S1SvImJ_G0028346.1 mouse_genomes_project 4 61168992 61184692 - Zfp37 protein_coding processed_transcript MGP_129S1SvImJ_T0065922.1 MGP_129S1SvImJ_G0028346.1 mouse_genomes_project 4 61169043 61184379 - Zfp37 protein_coding processed_transcript MGP_129S1SvImJ_T0010611.1 MGP_129S1SvImJ_G0008727.1 mouse_genomes_project 4 55662861 55662931 - Mir32 miRNA miRNA MGP_129S1SvImJ_T0004485.1 MGP_129S1SvImJ_G0003911.1 mouse_genomes_project 4 82074108 82116514 + Gm11266 antisense antisense MGP_129S1SvImJ_T0069734.1 MGP_129S1SvImJ_G0029210.1 mouse_genomes_project 4 159558480 159565087 + Faap20 protein_coding processed_transcript MGP_129S1SvImJ_T0069735.1 MGP_129S1SvImJ_G0029210.1 mouse_genomes_project 4 159558539 159559617 + Faap20 protein_coding processed_transcript MGP_129S1SvImJ_T0069736.1 MGP_129S1SvImJ_G0029210.1 mouse_genomes_project 4 159558555 159559475 + Faap20 protein_coding processed_transcript MGP_129S1SvImJ_T0069737.1 MGP_129S1SvImJ_G0029210.1 mouse_genomes_project 4 159558575 159565131 + Faap20 protein_coding processed_transcript MGP_129S1SvImJ_T0069738.1 MGP_129S1SvImJ_G0029210.1 mouse_genomes_project 4 159558642 159565355 + MGP_129S1SvImJ_P0069738 Faap20 protein_coding protein_coding MGP_129S1SvImJ_T0069739.1 MGP_129S1SvImJ_G0029210.1 mouse_genomes_project 4 159558642 159565351 + MGP_129S1SvImJ_P0069739 Faap20 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069740.1 MGP_129S1SvImJ_G0029210.1 mouse_genomes_project 4 159558665 159565051 + MGP_129S1SvImJ_P0069740 Faap20 protein_coding protein_coding MGP_129S1SvImJ_T0069741.1 MGP_129S1SvImJ_G0029210.1 mouse_genomes_project 4 159558679 159565352 + MGP_129S1SvImJ_P0069741 Faap20 protein_coding protein_coding MGP_129S1SvImJ_T0069742.1 MGP_129S1SvImJ_G0029210.1 mouse_genomes_project 4 159558996 159565086 + MGP_129S1SvImJ_P0069742 Faap20 protein_coding protein_coding MGP_129S1SvImJ_T0069743.1 MGP_129S1SvImJ_G0029210.1 mouse_genomes_project 4 159559360 159565116 + Faap20 protein_coding retained_intron MGP_129S1SvImJ_T0010655.1 MGP_129S1SvImJ_G0008771.1 mouse_genomes_project 4 139189144 139189203 - Gm22180 miRNA miRNA MGP_129S1SvImJ_T0098931.1 MGP_129S1SvImJ_G0037009.1 mouse_genomes_project 4 58018316 58020703 - Gm12594 sense_intronic sense_intronic MGP_129S1SvImJ_T0066873.1 MGP_129S1SvImJ_G0028562.1 mouse_genomes_project 4 109590905 109617713 + MGP_129S1SvImJ_P0066873 Txndc12 protein_coding protein_coding MGP_129S1SvImJ_T0066874.1 MGP_129S1SvImJ_G0028562.1 mouse_genomes_project 4 109590939 109602731 + Txndc12 protein_coding processed_transcript MGP_129S1SvImJ_T0066877.1 MGP_129S1SvImJ_G0028562.1 mouse_genomes_project 4 109613072 109614868 + Txndc12 protein_coding processed_transcript MGP_129S1SvImJ_T0014790.1 MGP_129S1SvImJ_G0012879.1 mouse_genomes_project 4 128506162 128507195 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065982.1 MGP_129S1SvImJ_G0028361.1 mouse_genomes_project 4 62144423 62155305 - MGP_129S1SvImJ_P0065982 Ambp protein_coding protein_coding MGP_129S1SvImJ_T0065983.1 MGP_129S1SvImJ_G0028361.1 mouse_genomes_project 4 62153845 62155931 - MGP_129S1SvImJ_P0065983 Ambp protein_coding protein_coding MGP_129S1SvImJ_T0014852.1 MGP_129S1SvImJ_G0012941.1 mouse_genomes_project 4 153723432 153723989 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066208.1 MGP_129S1SvImJ_G0028409.1 mouse_genomes_project 4 85797808 85838469 + Adamtsl1 protein_coding retained_intron MGP_129S1SvImJ_T0066209.1 MGP_129S1SvImJ_G0028409.1 mouse_genomes_project 4 85797808 86188392 + MGP_129S1SvImJ_P0066209 Adamtsl1 protein_coding protein_coding MGP_129S1SvImJ_T0066210.1 MGP_129S1SvImJ_G0028409.1 mouse_genomes_project 4 85797816 86011737 + MGP_129S1SvImJ_P0066210 Adamtsl1 protein_coding protein_coding MGP_129S1SvImJ_T0066211.1 MGP_129S1SvImJ_G0028409.1 mouse_genomes_project 4 85797821 86188395 + MGP_129S1SvImJ_P0066211 Adamtsl1 protein_coding protein_coding MGP_129S1SvImJ_T0066212.1 MGP_129S1SvImJ_G0028409.1 mouse_genomes_project 4 85797868 85958235 + MGP_129S1SvImJ_P0066212 Adamtsl1 protein_coding protein_coding MGP_129S1SvImJ_T0066213.1 MGP_129S1SvImJ_G0028409.1 mouse_genomes_project 4 85797913 85993178 + Adamtsl1 protein_coding retained_intron MGP_129S1SvImJ_T0066214.1 MGP_129S1SvImJ_G0028409.1 mouse_genomes_project 4 85838306 85863538 + Adamtsl1 protein_coding retained_intron MGP_129S1SvImJ_T0066215.1 MGP_129S1SvImJ_G0028409.1 mouse_genomes_project 4 85957856 86006902 + MGP_129S1SvImJ_P0066215 Adamtsl1 protein_coding protein_coding MGP_129S1SvImJ_T0066216.1 MGP_129S1SvImJ_G0028409.1 mouse_genomes_project 4 86029488 86030102 + Adamtsl1 protein_coding processed_transcript MGP_129S1SvImJ_T0066217.1 MGP_129S1SvImJ_G0028409.1 mouse_genomes_project 4 86029765 86188392 + Adamtsl1 protein_coding retained_intron MGP_129S1SvImJ_T0064980.1 MGP_129S1SvImJ_G0028127.1 mouse_genomes_project 4 32154749 32200249 - MGP_129S1SvImJ_P0064980 Orc3 protein_coding protein_coding MGP_129S1SvImJ_T0064981.1 MGP_129S1SvImJ_G0028127.1 mouse_genomes_project 4 32154749 32200218 - MGP_129S1SvImJ_P0064981 Orc3 protein_coding protein_coding MGP_129S1SvImJ_T0064982.1 MGP_129S1SvImJ_G0028127.1 mouse_genomes_project 4 32155518 32184056 - Orc3 protein_coding processed_transcript MGP_129S1SvImJ_T0064983.1 MGP_129S1SvImJ_G0028127.1 mouse_genomes_project 4 32156351 32160842 - Orc3 protein_coding processed_transcript MGP_129S1SvImJ_T0064984.1 MGP_129S1SvImJ_G0028127.1 mouse_genomes_project 4 32161588 32200216 - Orc3 protein_coding processed_transcript MGP_129S1SvImJ_T0064985.1 MGP_129S1SvImJ_G0028127.1 mouse_genomes_project 4 32177837 32180493 - Orc3 protein_coding processed_transcript MGP_129S1SvImJ_T0064986.1 MGP_129S1SvImJ_G0028127.1 mouse_genomes_project 4 32178363 32200198 - MGP_129S1SvImJ_P0064986 Orc3 protein_coding protein_coding MGP_129S1SvImJ_T0064987.1 MGP_129S1SvImJ_G0028127.1 mouse_genomes_project 4 32184006 32200208 - Orc3 protein_coding processed_transcript MGP_129S1SvImJ_T0064988.1 MGP_129S1SvImJ_G0028127.1 mouse_genomes_project 4 32184094 32200214 - Orc3 protein_coding processed_transcript MGP_129S1SvImJ_T0064989.1 MGP_129S1SvImJ_G0028127.1 mouse_genomes_project 4 32184680 32200209 - Orc3 protein_coding processed_transcript MGP_129S1SvImJ_T0065325.1 MGP_129S1SvImJ_G0028204.1 mouse_genomes_project 4 41535879 41537995 - MGP_129S1SvImJ_P0065325 Fam166b protein_coding protein_coding MGP_129S1SvImJ_T0065326.1 MGP_129S1SvImJ_G0028204.1 mouse_genomes_project 4 41535936 41537978 - MGP_129S1SvImJ_P0065326 Fam166b protein_coding protein_coding MGP_129S1SvImJ_T0065327.1 MGP_129S1SvImJ_G0028204.1 mouse_genomes_project 4 41536000 41536888 - MGP_129S1SvImJ_P0065327 Fam166b protein_coding protein_coding MGP_129S1SvImJ_T0065328.1 MGP_129S1SvImJ_G0028204.1 mouse_genomes_project 4 41536000 41537950 - MGP_129S1SvImJ_P0065328 Fam166b protein_coding protein_coding MGP_129S1SvImJ_T0065329.1 MGP_129S1SvImJ_G0028204.1 mouse_genomes_project 4 41536043 41537950 - MGP_129S1SvImJ_P0065329 Fam166b protein_coding protein_coding MGP_129S1SvImJ_T0065330.1 MGP_129S1SvImJ_G0028204.1 mouse_genomes_project 4 41536448 41537950 - MGP_129S1SvImJ_P0065330 Fam166b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067424.1 MGP_129S1SvImJ_G0028676.1 mouse_genomes_project 4 119757907 119758882 - MGP_129S1SvImJ_P0067424 Olfr1342 protein_coding protein_coding MGP_129S1SvImJ_T0014426.1 MGP_129S1SvImJ_G0012515.1 mouse_genomes_project 4 10180661 10181033 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066247.1 MGP_129S1SvImJ_G0028417.1 mouse_genomes_project 4 86770730 87034891 - MGP_129S1SvImJ_P0066247 Slc24a2 protein_coding protein_coding MGP_129S1SvImJ_T0066248.1 MGP_129S1SvImJ_G0028417.1 mouse_genomes_project 4 86770735 87032395 - MGP_129S1SvImJ_P0066248 Slc24a2 protein_coding protein_coding MGP_129S1SvImJ_T0066249.1 MGP_129S1SvImJ_G0028417.1 mouse_genomes_project 4 86778821 87032305 - MGP_129S1SvImJ_P0066249 Slc24a2 protein_coding protein_coding MGP_129S1SvImJ_T0066250.1 MGP_129S1SvImJ_G0028417.1 mouse_genomes_project 4 86778821 87032309 - MGP_129S1SvImJ_P0066250 Slc24a2 protein_coding protein_coding MGP_129S1SvImJ_T0066251.1 MGP_129S1SvImJ_G0028417.1 mouse_genomes_project 4 86783795 86805064 - Slc24a2 protein_coding processed_transcript MGP_129S1SvImJ_T0066252.1 MGP_129S1SvImJ_G0028417.1 mouse_genomes_project 4 86821838 86979086 - MGP_129S1SvImJ_P0066252 Slc24a2 protein_coding protein_coding MGP_129S1SvImJ_T0066253.1 MGP_129S1SvImJ_G0028417.1 mouse_genomes_project 4 86867512 87034837 - Slc24a2 protein_coding processed_transcript MGP_129S1SvImJ_T0066254.1 MGP_129S1SvImJ_G0028417.1 mouse_genomes_project 4 86867900 87034836 - Slc24a2 protein_coding processed_transcript MGP_129S1SvImJ_T0066255.1 MGP_129S1SvImJ_G0028417.1 mouse_genomes_project 4 86978585 87034881 - Slc24a2 protein_coding processed_transcript MGP_129S1SvImJ_T0014602.1 MGP_129S1SvImJ_G0012691.1 mouse_genomes_project 4 65461584 65461922 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001446.1 MGP_129S1SvImJ_G0001368.1 mouse_genomes_project 4 143233996 143236643 - TEC TEC MGP_129S1SvImJ_T0069395.1 MGP_129S1SvImJ_G0029149.1 mouse_genomes_project 4 154012466 154032500 + MGP_129S1SvImJ_P0069395 Gpr157 protein_coding protein_coding MGP_129S1SvImJ_T0069139.1 MGP_129S1SvImJ_G0029091.1 mouse_genomes_project 4 147780032 147803534 - MGP_129S1SvImJ_P0069139 1700012P22Rik protein_coding protein_coding MGP_129S1SvImJ_T0065208.1 MGP_129S1SvImJ_G0028186.1 mouse_genomes_project 4 40648293 40649380 + MGP_129S1SvImJ_P0065208 protein_coding protein_coding MGP_129S1SvImJ_T0014596.1 MGP_129S1SvImJ_G0012685.1 mouse_genomes_project 4 61942803 61943058 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068269.1 MGP_129S1SvImJ_G0028871.1 mouse_genomes_project 4 134618620 134623798 - MGP_129S1SvImJ_P0068269 Med18 protein_coding protein_coding MGP_129S1SvImJ_T0068270.1 MGP_129S1SvImJ_G0028871.1 mouse_genomes_project 4 134619831 134623208 - MGP_129S1SvImJ_P0068270 Med18 protein_coding protein_coding MGP_129S1SvImJ_T0014774.1 MGP_129S1SvImJ_G0012863.1 mouse_genomes_project 4 122943584 122943916 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068275.1 MGP_129S1SvImJ_G0028874.1 mouse_genomes_project 4 134700944 134723866 + MGP_129S1SvImJ_P0068275 Dnajc8 protein_coding protein_coding MGP_129S1SvImJ_T0068276.1 MGP_129S1SvImJ_G0028874.1 mouse_genomes_project 4 134700944 134714630 + MGP_129S1SvImJ_P0068276 Dnajc8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068277.1 MGP_129S1SvImJ_G0028874.1 mouse_genomes_project 4 134700961 134723785 + Dnajc8 protein_coding retained_intron MGP_129S1SvImJ_T0068278.1 MGP_129S1SvImJ_G0028874.1 mouse_genomes_project 4 134700970 134712195 + MGP_129S1SvImJ_P0068278 Dnajc8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068279.1 MGP_129S1SvImJ_G0028874.1 mouse_genomes_project 4 134700971 134723321 + MGP_129S1SvImJ_P0068279 Dnajc8 protein_coding protein_coding MGP_129S1SvImJ_T0068280.1 MGP_129S1SvImJ_G0028874.1 mouse_genomes_project 4 134700975 134723344 + MGP_129S1SvImJ_P0068280 Dnajc8 protein_coding protein_coding MGP_129S1SvImJ_T0068281.1 MGP_129S1SvImJ_G0028874.1 mouse_genomes_project 4 134700975 134720724 + MGP_129S1SvImJ_P0068281 Dnajc8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068282.1 MGP_129S1SvImJ_G0028874.1 mouse_genomes_project 4 134701034 134723263 + MGP_129S1SvImJ_P0068282 Dnajc8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068283.1 MGP_129S1SvImJ_G0028874.1 mouse_genomes_project 4 134701053 134723582 + MGP_129S1SvImJ_P0068283 Dnajc8 protein_coding protein_coding MGP_129S1SvImJ_T0068284.1 MGP_129S1SvImJ_G0028874.1 mouse_genomes_project 4 134701422 134712612 + Dnajc8 protein_coding retained_intron MGP_129S1SvImJ_T0068285.1 MGP_129S1SvImJ_G0028874.1 mouse_genomes_project 4 134714642 134723318 + MGP_129S1SvImJ_P0068285 Dnajc8 protein_coding protein_coding MGP_129S1SvImJ_T0068286.1 MGP_129S1SvImJ_G0028874.1 mouse_genomes_project 4 134721442 134723567 + Dnajc8 protein_coding retained_intron MGP_129S1SvImJ_T0068596.1 MGP_129S1SvImJ_G0028944.1 mouse_genomes_project 4 137886302 137934117 - MGP_129S1SvImJ_P0068596 Nipal3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068597.1 MGP_129S1SvImJ_G0028944.1 mouse_genomes_project 4 137887019 137934117 - MGP_129S1SvImJ_P0068597 Nipal3 protein_coding protein_coding MGP_129S1SvImJ_T0068598.1 MGP_129S1SvImJ_G0028944.1 mouse_genomes_project 4 137889702 137934234 - MGP_129S1SvImJ_P0068598 Nipal3 protein_coding protein_coding MGP_129S1SvImJ_T0068599.1 MGP_129S1SvImJ_G0028944.1 mouse_genomes_project 4 137892691 137910123 - MGP_129S1SvImJ_P0068599 Nipal3 protein_coding protein_coding MGP_129S1SvImJ_T0068600.1 MGP_129S1SvImJ_G0028944.1 mouse_genomes_project 4 137892982 137895866 - Nipal3 protein_coding processed_transcript MGP_129S1SvImJ_T0068601.1 MGP_129S1SvImJ_G0028944.1 mouse_genomes_project 4 137893072 137896138 - Nipal3 protein_coding processed_transcript MGP_129S1SvImJ_T0068602.1 MGP_129S1SvImJ_G0028944.1 mouse_genomes_project 4 137915232 137934579 - MGP_129S1SvImJ_P0068602 Nipal3 protein_coding protein_coding MGP_129S1SvImJ_T0068603.1 MGP_129S1SvImJ_G0028944.1 mouse_genomes_project 4 137918146 137934648 - MGP_129S1SvImJ_P0068603 Nipal3 protein_coding protein_coding MGP_129S1SvImJ_T0065056.1 MGP_129S1SvImJ_G0028143.1 mouse_genomes_project 4 38125480 38136461 - MGP_129S1SvImJ_P0065056 Ndufb6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0065057.1 MGP_129S1SvImJ_G0028143.1 mouse_genomes_project 4 38126241 38136545 - MGP_129S1SvImJ_P0065057 Ndufb6 protein_coding protein_coding MGP_129S1SvImJ_T0065058.1 MGP_129S1SvImJ_G0028143.1 mouse_genomes_project 4 38126315 38136533 - MGP_129S1SvImJ_P0065058 Ndufb6 protein_coding protein_coding MGP_129S1SvImJ_T0007868.1 MGP_129S1SvImJ_G0006435.1 mouse_genomes_project 4 56147780 56152169 - 1700042G15Rik lincRNA lincRNA MGP_129S1SvImJ_T0007869.1 MGP_129S1SvImJ_G0006435.1 mouse_genomes_project 4 56148104 56152188 - 1700042G15Rik lincRNA lincRNA MGP_129S1SvImJ_T0007870.1 MGP_129S1SvImJ_G0006435.1 mouse_genomes_project 4 56148206 56152148 - 1700042G15Rik lincRNA lincRNA MGP_129S1SvImJ_T0098933.1 MGP_129S1SvImJ_G0037011.1 mouse_genomes_project 4 83347397 83347876 + Gm26968 sense_intronic sense_intronic MGP_129S1SvImJ_T0064814.1 MGP_129S1SvImJ_G0028087.1 mouse_genomes_project 4 17056094 17079958 + MGP_129S1SvImJ_P0064814 Ggh protein_coding protein_coding MGP_129S1SvImJ_T0065046.1 MGP_129S1SvImJ_G0028141.1 mouse_genomes_project 4 38046587 38051529 - Ddx58 protein_coding processed_transcript MGP_129S1SvImJ_T0065047.1 MGP_129S1SvImJ_G0028141.1 mouse_genomes_project 4 38046591 38067007 - Ddx58 protein_coding processed_transcript MGP_129S1SvImJ_T0065048.1 MGP_129S1SvImJ_G0028141.1 mouse_genomes_project 4 38047887 38093950 - MGP_129S1SvImJ_P0065048 Ddx58 protein_coding protein_coding MGP_129S1SvImJ_T0065049.1 MGP_129S1SvImJ_G0028141.1 mouse_genomes_project 4 38051756 38056961 - Ddx58 protein_coding processed_transcript MGP_129S1SvImJ_T0065050.1 MGP_129S1SvImJ_G0028141.1 mouse_genomes_project 4 38051838 38093822 - MGP_129S1SvImJ_P0065050 Ddx58 protein_coding protein_coding MGP_129S1SvImJ_T0065051.1 MGP_129S1SvImJ_G0028141.1 mouse_genomes_project 4 38069837 38093877 - Ddx58 protein_coding processed_transcript MGP_129S1SvImJ_T0065052.1 MGP_129S1SvImJ_G0028141.1 mouse_genomes_project 4 38070282 38093844 - Ddx58 protein_coding processed_transcript MGP_129S1SvImJ_T0065053.1 MGP_129S1SvImJ_G0028141.1 mouse_genomes_project 4 38078195 38079982 - Ddx58 protein_coding processed_transcript MGP_129S1SvImJ_T0065054.1 MGP_129S1SvImJ_G0028141.1 mouse_genomes_project 4 38078684 38093947 - Ddx58 protein_coding processed_transcript MGP_129S1SvImJ_T0014828.1 MGP_129S1SvImJ_G0012917.1 mouse_genomes_project 4 144094878 144095693 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014508.1 MGP_129S1SvImJ_G0012597.1 mouse_genomes_project 4 30546920 30547367 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018109.1 MGP_129S1SvImJ_G0015567.1 mouse_genomes_project 4 110422385 110428607 - 9630013D21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018110.1 MGP_129S1SvImJ_G0015567.1 mouse_genomes_project 4 110423213 110428633 - 9630013D21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018111.1 MGP_129S1SvImJ_G0015567.1 mouse_genomes_project 4 110423342 110424911 - 9630013D21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018112.1 MGP_129S1SvImJ_G0015567.1 mouse_genomes_project 4 110423730 110428388 - 9630013D21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0067920.1 MGP_129S1SvImJ_G0028808.1 mouse_genomes_project 4 130725264 130747154 + MGP_129S1SvImJ_P0067920 Trim62 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067921.1 MGP_129S1SvImJ_G0028808.1 mouse_genomes_project 4 130725272 130754750 + MGP_129S1SvImJ_P0067921 Trim62 protein_coding protein_coding MGP_129S1SvImJ_T0007818.1 MGP_129S1SvImJ_G0006391.1 mouse_genomes_project 4 11004288 11018229 - 1700120G11Rik lincRNA lincRNA MGP_129S1SvImJ_T0065155.1 MGP_129S1SvImJ_G0028168.1 mouse_genomes_project 4 39677815 39679317 - MGP_129S1SvImJ_P0065155 Rpp25l protein_coding protein_coding MGP_129S1SvImJ_T0010631.1 MGP_129S1SvImJ_G0008747.1 mouse_genomes_project 4 119238460 119238520 - Mir7226 miRNA miRNA MGP_129S1SvImJ_T0064978.1 MGP_129S1SvImJ_G0028126.1 mouse_genomes_project 4 32134015 32150862 + MGP_129S1SvImJ_P0064978 Akirin2 protein_coding protein_coding MGP_129S1SvImJ_T0064979.1 MGP_129S1SvImJ_G0028126.1 mouse_genomes_project 4 32134029 32146723 + Akirin2 protein_coding processed_transcript MGP_129S1SvImJ_T0069875.1 MGP_129S1SvImJ_G0029237.1 mouse_genomes_project 4 160260455 160262300 - Pusl1 protein_coding processed_transcript MGP_129S1SvImJ_T0069877.1 MGP_129S1SvImJ_G0029237.1 mouse_genomes_project 4 160261438 160264562 - MGP_129S1SvImJ_P0069877 Pusl1 protein_coding protein_coding MGP_129S1SvImJ_T0069878.1 MGP_129S1SvImJ_G0029237.1 mouse_genomes_project 4 160263166 160263990 - Pusl1 protein_coding retained_intron MGP_129S1SvImJ_T0069879.1 MGP_129S1SvImJ_G0029237.1 mouse_genomes_project 4 160263277 160264507 - Pusl1 protein_coding retained_intron MGP_129S1SvImJ_T0069880.1 MGP_129S1SvImJ_G0029237.1 mouse_genomes_project 4 160263561 160264536 - Pusl1 protein_coding retained_intron MGP_129S1SvImJ_T0069881.1 MGP_129S1SvImJ_G0029237.1 mouse_genomes_project 4 160263622 160264550 - Pusl1 protein_coding processed_transcript MGP_129S1SvImJ_T0069882.1 MGP_129S1SvImJ_G0029237.1 mouse_genomes_project 4 160263832 160264509 - Pusl1 protein_coding retained_intron MGP_129S1SvImJ_T0066288.1 MGP_129S1SvImJ_G0028430.1 mouse_genomes_project 4 88546418 88547320 - MGP_129S1SvImJ_P0066288 Ifna2 protein_coding protein_coding MGP_129S1SvImJ_T0067880.1 MGP_129S1SvImJ_G0028796.1 mouse_genomes_project 4 129061476 129064095 - MGP_129S1SvImJ_P0067880 Gja4 protein_coding protein_coding MGP_129S1SvImJ_T0068463.1 MGP_129S1SvImJ_G0028914.1 mouse_genomes_project 4 136464226 136519225 - MGP_129S1SvImJ_P0068463 Cep85 protein_coding protein_coding MGP_129S1SvImJ_T0068464.1 MGP_129S1SvImJ_G0028914.1 mouse_genomes_project 4 136464234 136519094 - MGP_129S1SvImJ_P0068464 Cep85 protein_coding protein_coding MGP_129S1SvImJ_T0068465.1 MGP_129S1SvImJ_G0028914.1 mouse_genomes_project 4 136465463 136466937 - Cep85 protein_coding processed_transcript MGP_129S1SvImJ_T0068466.1 MGP_129S1SvImJ_G0028914.1 mouse_genomes_project 4 136466526 136473560 - Cep85 protein_coding retained_intron MGP_129S1SvImJ_T0068467.1 MGP_129S1SvImJ_G0028914.1 mouse_genomes_project 4 136488477 136490691 - Cep85 protein_coding retained_intron MGP_129S1SvImJ_T0068468.1 MGP_129S1SvImJ_G0028914.1 mouse_genomes_project 4 136492113 136493136 - Cep85 protein_coding processed_transcript MGP_129S1SvImJ_T0068469.1 MGP_129S1SvImJ_G0028914.1 mouse_genomes_project 4 136492309 136519198 - MGP_129S1SvImJ_P0068469 Cep85 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068470.1 MGP_129S1SvImJ_G0028914.1 mouse_genomes_project 4 136503551 136519164 - Cep85 protein_coding retained_intron MGP_129S1SvImJ_T0069678.1 MGP_129S1SvImJ_G0029200.1 mouse_genomes_project 4 159150789 159177301 + MGP_129S1SvImJ_P0069678 Mmel1 protein_coding protein_coding MGP_129S1SvImJ_T0069679.1 MGP_129S1SvImJ_G0029200.1 mouse_genomes_project 4 159150789 159177294 + MGP_129S1SvImJ_P0069679 Mmel1 protein_coding protein_coding MGP_129S1SvImJ_T0069680.1 MGP_129S1SvImJ_G0029200.1 mouse_genomes_project 4 159150840 159177301 + MGP_129S1SvImJ_P0069680 Mmel1 protein_coding protein_coding MGP_129S1SvImJ_T0069681.1 MGP_129S1SvImJ_G0029200.1 mouse_genomes_project 4 159152800 159177294 + MGP_129S1SvImJ_P0069681 Mmel1 protein_coding protein_coding MGP_129S1SvImJ_T0069682.1 MGP_129S1SvImJ_G0029200.1 mouse_genomes_project 4 159152834 159177294 + MGP_129S1SvImJ_P0069682 Mmel1 protein_coding protein_coding MGP_129S1SvImJ_T0069683.1 MGP_129S1SvImJ_G0029200.1 mouse_genomes_project 4 159162031 159167402 + MGP_129S1SvImJ_P0069683 Mmel1 protein_coding protein_coding MGP_129S1SvImJ_T0069684.1 MGP_129S1SvImJ_G0029200.1 mouse_genomes_project 4 159174597 159175728 + Mmel1 protein_coding retained_intron MGP_129S1SvImJ_T0004451.1 MGP_129S1SvImJ_G0003882.1 mouse_genomes_project 4 30014766 30027986 - Bach2os antisense antisense MGP_129S1SvImJ_T0004452.1 MGP_129S1SvImJ_G0003882.1 mouse_genomes_project 4 30018206 30027941 - Bach2os antisense antisense MGP_129S1SvImJ_T0004453.1 MGP_129S1SvImJ_G0003882.1 mouse_genomes_project 4 30020749 30028032 - Bach2os antisense antisense MGP_129S1SvImJ_T0014560.1 MGP_129S1SvImJ_G0012649.1 mouse_genomes_project 4 48557043 48557538 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004512.1 MGP_129S1SvImJ_G0003928.1 mouse_genomes_project 4 107684371 107688893 - Gm12786 antisense antisense MGP_129S1SvImJ_T0064794.1 MGP_129S1SvImJ_G0028077.1 mouse_genomes_project 4 14806815 15092600 + MGP_129S1SvImJ_P0064794 Mmp16 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064795.1 MGP_129S1SvImJ_G0028077.1 mouse_genomes_project 4 14807013 14961308 + MGP_129S1SvImJ_P0064795 Mmp16 protein_coding protein_coding MGP_129S1SvImJ_T0064796.1 MGP_129S1SvImJ_G0028077.1 mouse_genomes_project 4 14807390 15094286 + MGP_129S1SvImJ_P0064796 Mmp16 protein_coding protein_coding MGP_129S1SvImJ_T0064797.1 MGP_129S1SvImJ_G0028077.1 mouse_genomes_project 4 14807525 15015960 + Mmp16 protein_coding retained_intron MGP_129S1SvImJ_T0064798.1 MGP_129S1SvImJ_G0028077.1 mouse_genomes_project 4 15013035 15068385 + Mmp16 protein_coding retained_intron MGP_129S1SvImJ_T0068429.1 MGP_129S1SvImJ_G0028908.1 mouse_genomes_project 4 136317261 136333864 - MGP_129S1SvImJ_P0068429 Lin28a protein_coding protein_coding MGP_129S1SvImJ_T0068430.1 MGP_129S1SvImJ_G0028908.1 mouse_genomes_project 4 136320448 136327355 - MGP_129S1SvImJ_P0068430 Lin28a protein_coding protein_coding MGP_129S1SvImJ_T0068431.1 MGP_129S1SvImJ_G0028908.1 mouse_genomes_project 4 136320454 136324381 - MGP_129S1SvImJ_P0068431 Lin28a protein_coding protein_coding MGP_129S1SvImJ_T0068432.1 MGP_129S1SvImJ_G0028908.1 mouse_genomes_project 4 136322088 136333405 - MGP_129S1SvImJ_P0068432 Lin28a protein_coding protein_coding MGP_129S1SvImJ_T0068539.1 MGP_129S1SvImJ_G0028933.1 mouse_genomes_project 4 137112203 137139367 - MGP_129S1SvImJ_P0068539 Ldlrap1 protein_coding protein_coding MGP_129S1SvImJ_T0068540.1 MGP_129S1SvImJ_G0028933.1 mouse_genomes_project 4 137117229 137120761 - Ldlrap1 protein_coding retained_intron MGP_129S1SvImJ_T0068541.1 MGP_129S1SvImJ_G0028933.1 mouse_genomes_project 4 137120069 137121503 - Ldlrap1 protein_coding retained_intron MGP_129S1SvImJ_T0099882.1 MGP_129S1SvImJ_G0037949.1 mouse_genomes_project 4 138660908 138661011 + Gm26001 snRNA snRNA MGP_129S1SvImJ_T0014834.1 MGP_129S1SvImJ_G0012923.1 mouse_genomes_project 4 146693837 146695880 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007831.1 MGP_129S1SvImJ_G0006403.1 mouse_genomes_project 4 27844789 27938204 + Gm11924 lincRNA lincRNA MGP_129S1SvImJ_T0068318.1 MGP_129S1SvImJ_G0028883.1 mouse_genomes_project 4 135105841 135129929 - MGP_129S1SvImJ_P0068318 Fam76a protein_coding protein_coding MGP_129S1SvImJ_T0068319.1 MGP_129S1SvImJ_G0028883.1 mouse_genomes_project 4 135121125 135128290 - MGP_129S1SvImJ_P0068319 Fam76a protein_coding protein_coding MGP_129S1SvImJ_T0004639.1 MGP_129S1SvImJ_G0004023.1 mouse_genomes_project 4 160209413 160210100 - Mxra8os antisense antisense MGP_129S1SvImJ_T0067144.1 MGP_129S1SvImJ_G0028621.1 mouse_genomes_project 4 117015340 117021072 - MGP_129S1SvImJ_P0067144 Tspan1 protein_coding protein_coding MGP_129S1SvImJ_T0067145.1 MGP_129S1SvImJ_G0028621.1 mouse_genomes_project 4 117016779 117021073 - MGP_129S1SvImJ_P0067145 Tspan1 protein_coding protein_coding MGP_129S1SvImJ_T0067146.1 MGP_129S1SvImJ_G0028621.1 mouse_genomes_project 4 117016803 117018305 - Tspan1 protein_coding retained_intron MGP_129S1SvImJ_T0099810.1 MGP_129S1SvImJ_G0037877.1 mouse_genomes_project 4 12225240 12225347 + Gm24317 snRNA snRNA MGP_129S1SvImJ_T0018089.1 MGP_129S1SvImJ_G0015550.1 mouse_genomes_project 4 71411771 71426600 + C630043F03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0010615.1 MGP_129S1SvImJ_G0008731.1 mouse_genomes_project 4 76307198 76307275 - Gm23159 miRNA miRNA MGP_129S1SvImJ_T0014543.1 MGP_129S1SvImJ_G0012632.1 mouse_genomes_project 4 44030530 44030858 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014668.1 MGP_129S1SvImJ_G0012757.1 mouse_genomes_project 4 90535596 90536220 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014496.1 MGP_129S1SvImJ_G0012585.1 mouse_genomes_project 4 27604455 27604990 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068859.1 MGP_129S1SvImJ_G0029007.1 mouse_genomes_project 4 141689169 141710124 - MGP_129S1SvImJ_P0068859 Otud3 protein_coding protein_coding MGP_129S1SvImJ_T0010647.1 MGP_129S1SvImJ_G0008763.1 mouse_genomes_project 4 135427502 135427564 + Mir7017 miRNA miRNA MGP_129S1SvImJ_T0067502.1 MGP_129S1SvImJ_G0028698.1 mouse_genomes_project 4 120615959 120619789 - Ppcs protein_coding retained_intron MGP_129S1SvImJ_T0067503.1 MGP_129S1SvImJ_G0028698.1 mouse_genomes_project 4 120615959 120619851 - MGP_129S1SvImJ_P0067503 Ppcs protein_coding protein_coding MGP_129S1SvImJ_T0067504.1 MGP_129S1SvImJ_G0028698.1 mouse_genomes_project 4 120615959 120619807 - MGP_129S1SvImJ_P0067504 Ppcs protein_coding protein_coding MGP_129S1SvImJ_T0068705.1 MGP_129S1SvImJ_G0028969.1 mouse_genomes_project 4 139128953 139181019 - MGP_129S1SvImJ_P0068705 Kdm1a protein_coding protein_coding MGP_129S1SvImJ_T0068706.1 MGP_129S1SvImJ_G0028969.1 mouse_genomes_project 4 139128957 139180983 - MGP_129S1SvImJ_P0068706 Kdm1a protein_coding protein_coding MGP_129S1SvImJ_T0068707.1 MGP_129S1SvImJ_G0028969.1 mouse_genomes_project 4 139129261 139180604 - MGP_129S1SvImJ_P0068707 Kdm1a protein_coding protein_coding MGP_129S1SvImJ_T0068708.1 MGP_129S1SvImJ_G0028969.1 mouse_genomes_project 4 139129290 139130956 - Kdm1a protein_coding retained_intron MGP_129S1SvImJ_T0068709.1 MGP_129S1SvImJ_G0028969.1 mouse_genomes_project 4 139130286 139131586 - Kdm1a protein_coding retained_intron MGP_129S1SvImJ_T0068710.1 MGP_129S1SvImJ_G0028969.1 mouse_genomes_project 4 139131534 139133738 - Kdm1a protein_coding retained_intron MGP_129S1SvImJ_T0068711.1 MGP_129S1SvImJ_G0028969.1 mouse_genomes_project 4 139133620 139139881 - Kdm1a protein_coding retained_intron MGP_129S1SvImJ_T0068712.1 MGP_129S1SvImJ_G0028969.1 mouse_genomes_project 4 139133648 139146987 - MGP_129S1SvImJ_P0068712 Kdm1a protein_coding protein_coding MGP_129S1SvImJ_T0068713.1 MGP_129S1SvImJ_G0028969.1 mouse_genomes_project 4 139136911 139155538 - MGP_129S1SvImJ_P0068713 Kdm1a protein_coding protein_coding MGP_129S1SvImJ_T0066638.1 MGP_129S1SvImJ_G0028522.1 mouse_genomes_project 4 107260003 107277711 + MGP_129S1SvImJ_P0066638 Ttc22 protein_coding protein_coding MGP_129S1SvImJ_T0066639.1 MGP_129S1SvImJ_G0028522.1 mouse_genomes_project 4 107273495 107275150 + Ttc22 protein_coding processed_transcript MGP_129S1SvImJ_T0014488.1 MGP_129S1SvImJ_G0012577.1 mouse_genomes_project 4 25776396 25776743 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101147.1 MGP_129S1SvImJ_G0039214.1 mouse_genomes_project 4 118117651 118117755 - Gm26330 snoRNA snoRNA MGP_129S1SvImJ_T0007925.1 MGP_129S1SvImJ_G0006482.1 mouse_genomes_project 4 106683147 106703157 - Gm12729 lincRNA lincRNA MGP_129S1SvImJ_T0101150.1 MGP_129S1SvImJ_G0039217.1 mouse_genomes_project 4 120129537 120129662 + Gm24352 snoRNA snoRNA MGP_129S1SvImJ_T0067463.1 MGP_129S1SvImJ_G0028693.1 mouse_genomes_project 4 120416966 120433000 + MGP_129S1SvImJ_P0067463 P3h1 protein_coding protein_coding MGP_129S1SvImJ_T0067464.1 MGP_129S1SvImJ_G0028693.1 mouse_genomes_project 4 120416990 120433003 + MGP_129S1SvImJ_P0067464 P3h1 protein_coding protein_coding MGP_129S1SvImJ_T0067465.1 MGP_129S1SvImJ_G0028693.1 mouse_genomes_project 4 120416997 120432395 + P3h1 protein_coding processed_transcript MGP_129S1SvImJ_T0067466.1 MGP_129S1SvImJ_G0028693.1 mouse_genomes_project 4 120416997 120433000 + MGP_129S1SvImJ_P0067466 P3h1 protein_coding protein_coding MGP_129S1SvImJ_T0067467.1 MGP_129S1SvImJ_G0028693.1 mouse_genomes_project 4 120417005 120432397 + MGP_129S1SvImJ_P0067467 P3h1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067468.1 MGP_129S1SvImJ_G0028693.1 mouse_genomes_project 4 120417041 120433013 + MGP_129S1SvImJ_P0067468 P3h1 protein_coding protein_coding MGP_129S1SvImJ_T0067469.1 MGP_129S1SvImJ_G0028693.1 mouse_genomes_project 4 120417851 120420964 + P3h1 protein_coding processed_transcript MGP_129S1SvImJ_T0067470.1 MGP_129S1SvImJ_G0028693.1 mouse_genomes_project 4 120419395 120425529 + P3h1 protein_coding processed_transcript MGP_129S1SvImJ_T0067471.1 MGP_129S1SvImJ_G0028693.1 mouse_genomes_project 4 120421973 120428183 + P3h1 protein_coding processed_transcript MGP_129S1SvImJ_T0067472.1 MGP_129S1SvImJ_G0028693.1 mouse_genomes_project 4 120429055 120432161 + P3h1 protein_coding processed_transcript MGP_129S1SvImJ_T0067473.1 MGP_129S1SvImJ_G0028693.1 mouse_genomes_project 4 120430666 120432400 + P3h1 protein_coding processed_transcript MGP_129S1SvImJ_T0067474.1 MGP_129S1SvImJ_G0028693.1 mouse_genomes_project 4 120430889 120432082 + P3h1 protein_coding retained_intron MGP_129S1SvImJ_T0018055.1 MGP_129S1SvImJ_G0015531.1 mouse_genomes_project 4 620092 679314 + A830012C17Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0014691.1 MGP_129S1SvImJ_G0012780.1 mouse_genomes_project 4 99322586 99323305 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014456.1 MGP_129S1SvImJ_G0012545.1 mouse_genomes_project 4 17399119 17400423 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068897.1 MGP_129S1SvImJ_G0029017.1 mouse_genomes_project 4 142184766 142211051 + MGP_129S1SvImJ_P0068897 Emc1 protein_coding protein_coding MGP_129S1SvImJ_T0068898.1 MGP_129S1SvImJ_G0029017.1 mouse_genomes_project 4 142184772 142211051 + MGP_129S1SvImJ_P0068898 Emc1 protein_coding protein_coding MGP_129S1SvImJ_T0068899.1 MGP_129S1SvImJ_G0029017.1 mouse_genomes_project 4 142184772 142211051 + MGP_129S1SvImJ_P0068899 Emc1 protein_coding protein_coding MGP_129S1SvImJ_T0068900.1 MGP_129S1SvImJ_G0029017.1 mouse_genomes_project 4 142184788 142186644 + Emc1 protein_coding processed_transcript MGP_129S1SvImJ_T0068902.1 MGP_129S1SvImJ_G0029017.1 mouse_genomes_project 4 142191576 142208248 + Emc1 protein_coding processed_transcript MGP_129S1SvImJ_T0018116.1 MGP_129S1SvImJ_G0015570.1 mouse_genomes_project 4 118176318 118176767 - 1700012C08Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0066106.1 MGP_129S1SvImJ_G0028395.1 mouse_genomes_project 4 80390548 80394109 + MGP_129S1SvImJ_P0066106 Tyrp1 protein_coding protein_coding MGP_129S1SvImJ_T0066107.1 MGP_129S1SvImJ_G0028395.1 mouse_genomes_project 4 80390655 80408884 + MGP_129S1SvImJ_P0066107 Tyrp1 protein_coding protein_coding MGP_129S1SvImJ_T0066108.1 MGP_129S1SvImJ_G0028395.1 mouse_genomes_project 4 80390732 80408885 + MGP_129S1SvImJ_P0066108 Tyrp1 protein_coding protein_coding MGP_129S1SvImJ_T0066109.1 MGP_129S1SvImJ_G0028395.1 mouse_genomes_project 4 80402992 80408166 + MGP_129S1SvImJ_P0066109 Tyrp1 protein_coding protein_coding MGP_129S1SvImJ_T0014573.1 MGP_129S1SvImJ_G0012662.1 mouse_genomes_project 4 52539899 52540303 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066298.1 MGP_129S1SvImJ_G0028440.1 mouse_genomes_project 4 89074896 89136176 + MGP_129S1SvImJ_P0066298 Mtap protein_coding protein_coding MGP_129S1SvImJ_T0066299.1 MGP_129S1SvImJ_G0028440.1 mouse_genomes_project 4 89131457 89134568 + Mtap protein_coding processed_transcript MGP_129S1SvImJ_T0065022.1 MGP_129S1SvImJ_G0028135.1 mouse_genomes_project 4 32556239 32777477 - MGP_129S1SvImJ_P0065022 Mob3b protein_coding protein_coding MGP_129S1SvImJ_T0065023.1 MGP_129S1SvImJ_G0028135.1 mouse_genomes_project 4 32695009 32777477 - Mob3b protein_coding processed_transcript MGP_129S1SvImJ_T0014728.1 MGP_129S1SvImJ_G0012817.1 mouse_genomes_project 4 109694379 109694615 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099893.1 MGP_129S1SvImJ_G0037960.1 mouse_genomes_project 4 154993737 154993897 + Gm23405 snRNA snRNA MGP_129S1SvImJ_T0007945.1 MGP_129S1SvImJ_G0006497.1 mouse_genomes_project 4 120165926 120166752 - Gm12862 lincRNA lincRNA MGP_129S1SvImJ_T0098935.1 MGP_129S1SvImJ_G0037013.1 mouse_genomes_project 4 100366548 100367769 + Gm12701 sense_intronic sense_intronic MGP_129S1SvImJ_T0098365.1 MGP_129S1SvImJ_G0036450.1 mouse_genomes_project 4 131830619 131832265 + pseudogene pseudogene MGP_129S1SvImJ_T0004460.1 MGP_129S1SvImJ_G0003889.1 mouse_genomes_project 4 41624120 41628440 - Gm12454 antisense antisense MGP_129S1SvImJ_T0004461.1 MGP_129S1SvImJ_G0003889.1 mouse_genomes_project 4 41625347 41628463 - Gm12454 antisense antisense MGP_129S1SvImJ_T0064787.1 MGP_129S1SvImJ_G0028075.1 mouse_genomes_project 4 12897839 12914601 - MGP_129S1SvImJ_P0064787 Osgin2 protein_coding protein_coding MGP_129S1SvImJ_T0064788.1 MGP_129S1SvImJ_G0028075.1 mouse_genomes_project 4 12897945 12902838 - Osgin2 protein_coding processed_transcript MGP_129S1SvImJ_T0064789.1 MGP_129S1SvImJ_G0028075.1 mouse_genomes_project 4 12902680 12914509 - MGP_129S1SvImJ_P0064789 Osgin2 protein_coding protein_coding MGP_129S1SvImJ_T0064790.1 MGP_129S1SvImJ_G0028075.1 mouse_genomes_project 4 12903258 12914534 - Osgin2 protein_coding processed_transcript MGP_129S1SvImJ_T0064791.1 MGP_129S1SvImJ_G0028075.1 mouse_genomes_project 4 12905603 12907118 - Osgin2 protein_coding processed_transcript MGP_129S1SvImJ_T0065770.1 MGP_129S1SvImJ_G0028304.1 mouse_genomes_project 4 53637530 53704846 + MGP_129S1SvImJ_P0065770 Zfp462 protein_coding protein_coding MGP_129S1SvImJ_T0065771.1 MGP_129S1SvImJ_G0028304.1 mouse_genomes_project 4 53640458 53781036 + MGP_129S1SvImJ_P0065771 Zfp462 protein_coding protein_coding MGP_129S1SvImJ_T0065772.1 MGP_129S1SvImJ_G0028304.1 mouse_genomes_project 4 53707912 53778825 + MGP_129S1SvImJ_P0065772 Zfp462 protein_coding protein_coding MGP_129S1SvImJ_T0065773.1 MGP_129S1SvImJ_G0028304.1 mouse_genomes_project 4 53708026 53778797 + MGP_129S1SvImJ_P0065773 Zfp462 protein_coding protein_coding MGP_129S1SvImJ_T0066440.1 MGP_129S1SvImJ_G0028476.1 mouse_genomes_project 4 99113832 99131930 + MGP_129S1SvImJ_P0066440 Usp1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0066441.1 MGP_129S1SvImJ_G0028476.1 mouse_genomes_project 4 99113832 99134420 + MGP_129S1SvImJ_P0066441 Usp1 protein_coding protein_coding MGP_129S1SvImJ_T0066442.1 MGP_129S1SvImJ_G0028476.1 mouse_genomes_project 4 99113901 99134420 + MGP_129S1SvImJ_P0066442 Usp1 protein_coding protein_coding MGP_129S1SvImJ_T0066443.1 MGP_129S1SvImJ_G0028476.1 mouse_genomes_project 4 99113986 99118267 + MGP_129S1SvImJ_P0066443 Usp1 protein_coding protein_coding MGP_129S1SvImJ_T0066444.1 MGP_129S1SvImJ_G0028476.1 mouse_genomes_project 4 99118093 99120878 + MGP_129S1SvImJ_P0066444 Usp1 protein_coding protein_coding MGP_129S1SvImJ_T0099887.1 MGP_129S1SvImJ_G0037954.1 mouse_genomes_project 4 148133936 148134102 - Gm25938 snRNA snRNA MGP_129S1SvImJ_T0014716.1 MGP_129S1SvImJ_G0012805.1 mouse_genomes_project 4 106734690 106736358 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014714.1 MGP_129S1SvImJ_G0012803.1 mouse_genomes_project 4 106065009 106065460 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004585.1 MGP_129S1SvImJ_G0003985.1 mouse_genomes_project 4 144132443 144134911 + 4921514A10Rik antisense antisense MGP_129S1SvImJ_T0069596.1 MGP_129S1SvImJ_G0029185.1 mouse_genomes_project 4 158187737 158194072 + MGP_129S1SvImJ_P0069596 A430005L14Rik protein_coding protein_coding MGP_129S1SvImJ_T0069597.1 MGP_129S1SvImJ_G0029185.1 mouse_genomes_project 4 158187737 158194065 + MGP_129S1SvImJ_P0069597 A430005L14Rik protein_coding protein_coding MGP_129S1SvImJ_T0069598.1 MGP_129S1SvImJ_G0029185.1 mouse_genomes_project 4 158187755 158190567 + A430005L14Rik protein_coding retained_intron MGP_129S1SvImJ_T0069599.1 MGP_129S1SvImJ_G0029185.1 mouse_genomes_project 4 158187766 158192012 + MGP_129S1SvImJ_P0069599 A430005L14Rik protein_coding protein_coding MGP_129S1SvImJ_T0069600.1 MGP_129S1SvImJ_G0029185.1 mouse_genomes_project 4 158187766 158193950 + MGP_129S1SvImJ_P0069600 A430005L14Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069601.1 MGP_129S1SvImJ_G0029185.1 mouse_genomes_project 4 158187829 158191235 + A430005L14Rik protein_coding processed_transcript MGP_129S1SvImJ_T0069602.1 MGP_129S1SvImJ_G0029185.1 mouse_genomes_project 4 158190292 158191590 + A430005L14Rik protein_coding retained_intron MGP_129S1SvImJ_T0064916.1 MGP_129S1SvImJ_G0028109.1 mouse_genomes_project 4 29685223 30042459 + MGP_129S1SvImJ_P0064916 Bach2 protein_coding protein_coding MGP_129S1SvImJ_T0064917.1 MGP_129S1SvImJ_G0028109.1 mouse_genomes_project 4 29685369 30037539 + MGP_129S1SvImJ_P0064917 Bach2 protein_coding protein_coding MGP_129S1SvImJ_T0064918.1 MGP_129S1SvImJ_G0028109.1 mouse_genomes_project 4 29685496 29956407 + Bach2 protein_coding processed_transcript MGP_129S1SvImJ_T0064919.1 MGP_129S1SvImJ_G0028109.1 mouse_genomes_project 4 29694181 29764279 + Bach2 protein_coding processed_transcript MGP_129S1SvImJ_T0064920.1 MGP_129S1SvImJ_G0028109.1 mouse_genomes_project 4 29870409 30042463 + MGP_129S1SvImJ_P0064920 Bach2 protein_coding protein_coding MGP_129S1SvImJ_T0064921.1 MGP_129S1SvImJ_G0028109.1 mouse_genomes_project 4 29956275 29957397 + Bach2 protein_coding processed_transcript MGP_129S1SvImJ_T0064922.1 MGP_129S1SvImJ_G0028109.1 mouse_genomes_project 4 30031268 30036178 + Bach2 protein_coding processed_transcript MGP_129S1SvImJ_T0099886.1 MGP_129S1SvImJ_G0037953.1 mouse_genomes_project 4 143910146 143910262 + Gm26226 snRNA snRNA MGP_129S1SvImJ_T0014533.1 MGP_129S1SvImJ_G0012622.1 mouse_genomes_project 4 38554931 38555378 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064745.1 MGP_129S1SvImJ_G0028061.1 mouse_genomes_project 4 8791667 8797396 + Rbm12b1 protein_coding processed_transcript MGP_129S1SvImJ_T0064746.1 MGP_129S1SvImJ_G0028061.1 mouse_genomes_project 4 8791670 8799354 + MGP_129S1SvImJ_P0064746 Rbm12b1 protein_coding protein_coding MGP_129S1SvImJ_T0064747.1 MGP_129S1SvImJ_G0028061.1 mouse_genomes_project 4 8791688 8797736 + Rbm12b1 protein_coding processed_transcript MGP_129S1SvImJ_T0064748.1 MGP_129S1SvImJ_G0028061.1 mouse_genomes_project 4 8791720 8799354 + MGP_129S1SvImJ_P0064748 Rbm12b1 protein_coding protein_coding MGP_129S1SvImJ_T0064728.1 MGP_129S1SvImJ_G0028056.1 mouse_genomes_project 4 8389112 8399393 + MGP_129S1SvImJ_P0064728 Gem protein_coding protein_coding MGP_129S1SvImJ_T0064729.1 MGP_129S1SvImJ_G0028056.1 mouse_genomes_project 4 8390462 8399393 + MGP_129S1SvImJ_P0064729 Gem protein_coding protein_coding MGP_129S1SvImJ_T0102532.1 MGP_129S1SvImJ_G0040365.1 mouse_genomes_project 4 112987183 113003812 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0014765.1 MGP_129S1SvImJ_G0012854.1 mouse_genomes_project 4 120757966 120758369 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068547.1 MGP_129S1SvImJ_G0028935.1 mouse_genomes_project 4 137245098 137283229 + MGP_129S1SvImJ_P0068547 protein_coding protein_coding MGP_129S1SvImJ_T0068548.1 MGP_129S1SvImJ_G0028935.1 mouse_genomes_project 4 137266636 137277366 + protein_coding retained_intron MGP_129S1SvImJ_T0014627.1 MGP_129S1SvImJ_G0012716.1 mouse_genomes_project 4 74596920 74598100 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014595.1 MGP_129S1SvImJ_G0012684.1 mouse_genomes_project 4 61664107 61694868 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007814.1 MGP_129S1SvImJ_G0006387.1 mouse_genomes_project 4 8696907 8706477 - Gm11840 lincRNA lincRNA MGP_129S1SvImJ_T0068741.1 MGP_129S1SvImJ_G0028985.1 mouse_genomes_project 4 140247611 140259764 + MGP_129S1SvImJ_P0068741 Usp48 protein_coding protein_coding MGP_129S1SvImJ_T0068742.1 MGP_129S1SvImJ_G0028985.1 mouse_genomes_project 4 140247996 140314711 + MGP_129S1SvImJ_P0068742 Usp48 protein_coding protein_coding MGP_129S1SvImJ_T0068743.1 MGP_129S1SvImJ_G0028985.1 mouse_genomes_project 4 140248063 140314711 + MGP_129S1SvImJ_P0068743 Usp48 protein_coding protein_coding MGP_129S1SvImJ_T0068744.1 MGP_129S1SvImJ_G0028985.1 mouse_genomes_project 4 140248063 140280456 + MGP_129S1SvImJ_P0068744 Usp48 protein_coding protein_coding MGP_129S1SvImJ_T0068745.1 MGP_129S1SvImJ_G0028985.1 mouse_genomes_project 4 140248084 140280456 + MGP_129S1SvImJ_P0068745 Usp48 protein_coding protein_coding MGP_129S1SvImJ_T0068746.1 MGP_129S1SvImJ_G0028985.1 mouse_genomes_project 4 140273635 140280456 + MGP_129S1SvImJ_P0068746 Usp48 protein_coding protein_coding MGP_129S1SvImJ_T0068747.1 MGP_129S1SvImJ_G0028985.1 mouse_genomes_project 4 140274892 140278535 + Usp48 protein_coding processed_transcript MGP_129S1SvImJ_T0068748.1 MGP_129S1SvImJ_G0028985.1 mouse_genomes_project 4 140276323 140288259 + Usp48 protein_coding processed_transcript MGP_129S1SvImJ_T0068749.1 MGP_129S1SvImJ_G0028985.1 mouse_genomes_project 4 140278535 140288693 + MGP_129S1SvImJ_P0068749 Usp48 protein_coding protein_coding MGP_129S1SvImJ_T0068750.1 MGP_129S1SvImJ_G0028985.1 mouse_genomes_project 4 140280327 140314717 + Usp48 protein_coding processed_transcript MGP_129S1SvImJ_T0068751.1 MGP_129S1SvImJ_G0028985.1 mouse_genomes_project 4 140288432 140311435 + MGP_129S1SvImJ_P0068751 Usp48 protein_coding protein_coding MGP_129S1SvImJ_T0068752.1 MGP_129S1SvImJ_G0028985.1 mouse_genomes_project 4 140288503 140293604 + MGP_129S1SvImJ_P0068752 Usp48 protein_coding protein_coding MGP_129S1SvImJ_T0068753.1 MGP_129S1SvImJ_G0028985.1 mouse_genomes_project 4 140288907 140309186 + MGP_129S1SvImJ_P0068753 Usp48 protein_coding protein_coding MGP_129S1SvImJ_T0068754.1 MGP_129S1SvImJ_G0028985.1 mouse_genomes_project 4 140300520 140311428 + MGP_129S1SvImJ_P0068754 Usp48 protein_coding protein_coding MGP_129S1SvImJ_T0068755.1 MGP_129S1SvImJ_G0028985.1 mouse_genomes_project 4 140300605 140309020 + MGP_129S1SvImJ_P0068755 Usp48 protein_coding protein_coding MGP_129S1SvImJ_T0068756.1 MGP_129S1SvImJ_G0028985.1 mouse_genomes_project 4 140306480 140312511 + MGP_129S1SvImJ_P0068756 Usp48 protein_coding protein_coding MGP_129S1SvImJ_T0068757.1 MGP_129S1SvImJ_G0028985.1 mouse_genomes_project 4 140313574 140314710 + Usp48 protein_coding processed_transcript MGP_129S1SvImJ_T0010621.1 MGP_129S1SvImJ_G0008737.1 mouse_genomes_project 4 91359546 91359626 - Mir6402 miRNA miRNA MGP_129S1SvImJ_T0014817.1 MGP_129S1SvImJ_G0012906.1 mouse_genomes_project 4 138338771 138339269 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010650.1 MGP_129S1SvImJ_G0008766.1 mouse_genomes_project 4 136009464 136009523 - Mir7227 miRNA miRNA MGP_129S1SvImJ_T0068481.1 MGP_129S1SvImJ_G0028918.1 mouse_genomes_project 4 136580502 136582809 - MGP_129S1SvImJ_P0068481 Zfp593 protein_coding protein_coding MGP_129S1SvImJ_T0068482.1 MGP_129S1SvImJ_G0028918.1 mouse_genomes_project 4 136580520 136582759 - Zfp593 protein_coding processed_transcript MGP_129S1SvImJ_T0010622.1 MGP_129S1SvImJ_G0008738.1 mouse_genomes_project 4 94726020 94726101 + Mir872 miRNA miRNA MGP_129S1SvImJ_T0068494.1 MGP_129S1SvImJ_G0028922.1 mouse_genomes_project 4 136612012 136626823 - MGP_129S1SvImJ_P0068494 Pdik1l protein_coding protein_coding MGP_129S1SvImJ_T0068495.1 MGP_129S1SvImJ_G0028922.1 mouse_genomes_project 4 136612012 136627479 - MGP_129S1SvImJ_P0068495 Pdik1l protein_coding protein_coding MGP_129S1SvImJ_T0068496.1 MGP_129S1SvImJ_G0028922.1 mouse_genomes_project 4 136612013 136626837 - MGP_129S1SvImJ_P0068496 Pdik1l protein_coding protein_coding MGP_129S1SvImJ_T0068497.1 MGP_129S1SvImJ_G0028922.1 mouse_genomes_project 4 136618078 136626809 - MGP_129S1SvImJ_P0068497 Pdik1l protein_coding protein_coding MGP_129S1SvImJ_T0068498.1 MGP_129S1SvImJ_G0028922.1 mouse_genomes_project 4 136618892 136626834 - MGP_129S1SvImJ_P0068498 Pdik1l protein_coding protein_coding MGP_129S1SvImJ_T0068499.1 MGP_129S1SvImJ_G0028922.1 mouse_genomes_project 4 136623154 136626809 - Pdik1l protein_coding processed_transcript MGP_129S1SvImJ_T0064810.1 MGP_129S1SvImJ_G0028085.1 mouse_genomes_project 4 16881555 16927093 - MGP_129S1SvImJ_P0064810 Atp6v0d2 protein_coding protein_coding MGP_129S1SvImJ_T0064811.1 MGP_129S1SvImJ_G0028085.1 mouse_genomes_project 4 16895565 16921431 - MGP_129S1SvImJ_P0064811 Atp6v0d2 protein_coding protein_coding MGP_129S1SvImJ_T0066947.1 MGP_129S1SvImJ_G0028575.1 mouse_genomes_project 4 110780491 110786148 + MGP_129S1SvImJ_P0066947 Dmrta2 protein_coding protein_coding MGP_129S1SvImJ_T0064924.1 MGP_129S1SvImJ_G0028111.1 mouse_genomes_project 4 30077039 30097279 + Casp8ap2 protein_coding processed_transcript MGP_129S1SvImJ_T0064925.1 MGP_129S1SvImJ_G0028111.1 mouse_genomes_project 4 30077058 30105035 + Casp8ap2 protein_coding processed_transcript MGP_129S1SvImJ_T0064926.1 MGP_129S1SvImJ_G0028111.1 mouse_genomes_project 4 30077061 30122103 + MGP_129S1SvImJ_P0064926 Casp8ap2 protein_coding protein_coding MGP_129S1SvImJ_T0064927.1 MGP_129S1SvImJ_G0028111.1 mouse_genomes_project 4 30077066 30122103 + MGP_129S1SvImJ_P0064927 Casp8ap2 protein_coding protein_coding MGP_129S1SvImJ_T0064928.1 MGP_129S1SvImJ_G0028111.1 mouse_genomes_project 4 30089550 30122103 + MGP_129S1SvImJ_P0064928 Casp8ap2 protein_coding protein_coding MGP_129S1SvImJ_T0067664.1 MGP_129S1SvImJ_G0028742.1 mouse_genomes_project 4 125192240 125197375 - MGP_129S1SvImJ_P0067664 Ndufs5 protein_coding protein_coding MGP_129S1SvImJ_T0067703.1 MGP_129S1SvImJ_G0028755.1 mouse_genomes_project 4 126408385 126409636 - protein_coding retained_intron MGP_129S1SvImJ_T0067704.1 MGP_129S1SvImJ_G0028755.1 mouse_genomes_project 4 126408790 126410115 - MGP_129S1SvImJ_P0067704 protein_coding protein_coding MGP_129S1SvImJ_T0067705.1 MGP_129S1SvImJ_G0028755.1 mouse_genomes_project 4 126408790 126410036 - MGP_129S1SvImJ_P0067705 protein_coding protein_coding MGP_129S1SvImJ_T0067706.1 MGP_129S1SvImJ_G0028755.1 mouse_genomes_project 4 126408791 126409967 - MGP_129S1SvImJ_P0067706 protein_coding protein_coding MGP_129S1SvImJ_T0067707.1 MGP_129S1SvImJ_G0028755.1 mouse_genomes_project 4 126408795 126410513 - MGP_129S1SvImJ_P0067707 protein_coding protein_coding MGP_129S1SvImJ_T0067708.1 MGP_129S1SvImJ_G0028755.1 mouse_genomes_project 4 126408851 126409779 - MGP_129S1SvImJ_P0067708 protein_coding protein_coding MGP_129S1SvImJ_T0066394.1 MGP_129S1SvImJ_G0028466.1 mouse_genomes_project 4 96728769 96762048 - MGP_129S1SvImJ_P0066394 Cyp2j5 protein_coding protein_coding MGP_129S1SvImJ_T0014492.1 MGP_129S1SvImJ_G0012581.1 mouse_genomes_project 4 25912025 25912442 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007846.1 MGP_129S1SvImJ_G0006418.1 mouse_genomes_project 4 43929057 43973542 + Gm829 lincRNA lincRNA MGP_129S1SvImJ_T0007847.1 MGP_129S1SvImJ_G0006418.1 mouse_genomes_project 4 43929057 43943146 + Gm829 lincRNA lincRNA MGP_129S1SvImJ_T0101115.1 MGP_129S1SvImJ_G0039182.1 mouse_genomes_project 4 54005521 54005736 - Gm25419 snoRNA snoRNA MGP_129S1SvImJ_T0101112.1 MGP_129S1SvImJ_G0039179.1 mouse_genomes_project 4 50227188 50227297 + Gm23043 snoRNA snoRNA MGP_129S1SvImJ_T0014846.1 MGP_129S1SvImJ_G0012935.1 mouse_genomes_project 4 151782874 151783280 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065171.1 MGP_129S1SvImJ_G0028172.1 mouse_genomes_project 4 39722111 39725579 + MGP_129S1SvImJ_P0065171 Galt protein_coding protein_coding MGP_129S1SvImJ_T0065172.1 MGP_129S1SvImJ_G0028172.1 mouse_genomes_project 4 39722111 39725579 + MGP_129S1SvImJ_P0065172 Galt protein_coding protein_coding MGP_129S1SvImJ_T0065173.1 MGP_129S1SvImJ_G0028172.1 mouse_genomes_project 4 39722136 39724433 + Galt protein_coding processed_transcript MGP_129S1SvImJ_T0065174.1 MGP_129S1SvImJ_G0028172.1 mouse_genomes_project 4 39722136 39723331 + Galt protein_coding processed_transcript MGP_129S1SvImJ_T0065175.1 MGP_129S1SvImJ_G0028172.1 mouse_genomes_project 4 39722641 39724364 + Galt protein_coding processed_transcript MGP_129S1SvImJ_T0065176.1 MGP_129S1SvImJ_G0028172.1 mouse_genomes_project 4 39722723 39724156 + Galt protein_coding processed_transcript MGP_129S1SvImJ_T0065177.1 MGP_129S1SvImJ_G0028172.1 mouse_genomes_project 4 39722844 39724364 + Galt protein_coding processed_transcript MGP_129S1SvImJ_T0065178.1 MGP_129S1SvImJ_G0028172.1 mouse_genomes_project 4 39723093 39725579 + Galt protein_coding processed_transcript MGP_129S1SvImJ_T0065179.1 MGP_129S1SvImJ_G0028172.1 mouse_genomes_project 4 39723137 39725122 + Galt protein_coding processed_transcript MGP_129S1SvImJ_T0065180.1 MGP_129S1SvImJ_G0028172.1 mouse_genomes_project 4 39723145 39724662 + Galt protein_coding processed_transcript MGP_129S1SvImJ_T0066397.1 MGP_129S1SvImJ_G0028469.1 mouse_genomes_project 4 97688374 97705214 - E130114P18Rik protein_coding processed_transcript MGP_129S1SvImJ_T0066398.1 MGP_129S1SvImJ_G0028469.1 mouse_genomes_project 4 97688374 97705190 - E130114P18Rik protein_coding processed_transcript MGP_129S1SvImJ_T0066399.1 MGP_129S1SvImJ_G0028469.1 mouse_genomes_project 4 97688374 97705230 - E130114P18Rik protein_coding processed_transcript MGP_129S1SvImJ_T0066400.1 MGP_129S1SvImJ_G0028469.1 mouse_genomes_project 4 97688374 97705223 - MGP_129S1SvImJ_P0066400 E130114P18Rik protein_coding protein_coding MGP_129S1SvImJ_T0066401.1 MGP_129S1SvImJ_G0028469.1 mouse_genomes_project 4 97688374 97705201 - MGP_129S1SvImJ_P0066401 E130114P18Rik protein_coding protein_coding MGP_129S1SvImJ_T0066402.1 MGP_129S1SvImJ_G0028469.1 mouse_genomes_project 4 97688374 97907033 - MGP_129S1SvImJ_P0066402 E130114P18Rik protein_coding protein_coding MGP_129S1SvImJ_T0066403.1 MGP_129S1SvImJ_G0028469.1 mouse_genomes_project 4 97689431 97816233 - MGP_129S1SvImJ_P0066403 E130114P18Rik protein_coding protein_coding MGP_129S1SvImJ_T0066404.1 MGP_129S1SvImJ_G0028469.1 mouse_genomes_project 4 97696506 97705206 - E130114P18Rik protein_coding processed_transcript MGP_129S1SvImJ_T0066405.1 MGP_129S1SvImJ_G0028469.1 mouse_genomes_project 4 97804743 97907058 - E130114P18Rik protein_coding processed_transcript MGP_129S1SvImJ_T0007882.1 MGP_129S1SvImJ_G0006447.1 mouse_genomes_project 4 70291035 70356599 - Gm11228 lincRNA lincRNA MGP_129S1SvImJ_T0066944.1 MGP_129S1SvImJ_G0028574.1 mouse_genomes_project 4 110448157 110762534 + MGP_129S1SvImJ_P0066944 Faf1 protein_coding protein_coding MGP_129S1SvImJ_T0066945.1 MGP_129S1SvImJ_G0028574.1 mouse_genomes_project 4 110448566 110456091 + Faf1 protein_coding processed_transcript MGP_129S1SvImJ_T0066946.1 MGP_129S1SvImJ_G0028574.1 mouse_genomes_project 4 110634056 110724434 + Faf1 protein_coding processed_transcript MGP_129S1SvImJ_T0008005.1 MGP_129S1SvImJ_G0006535.1 mouse_genomes_project 4 138075566 138079110 + 1700029M20Rik lincRNA lincRNA MGP_129S1SvImJ_T0008006.1 MGP_129S1SvImJ_G0006535.1 mouse_genomes_project 4 138075685 138077397 + 1700029M20Rik lincRNA lincRNA MGP_129S1SvImJ_T0008007.1 MGP_129S1SvImJ_G0006535.1 mouse_genomes_project 4 138075729 138077397 + 1700029M20Rik lincRNA lincRNA MGP_129S1SvImJ_T0008008.1 MGP_129S1SvImJ_G0006535.1 mouse_genomes_project 4 138076164 138076897 + 1700029M20Rik lincRNA lincRNA MGP_129S1SvImJ_T0098588.1 MGP_129S1SvImJ_G0036673.1 mouse_genomes_project 4 47200097 47200209 - Gm24573 rRNA rRNA MGP_129S1SvImJ_T0001434.1 MGP_129S1SvImJ_G0001357.1 mouse_genomes_project 4 99608088 99617695 - TEC TEC MGP_129S1SvImJ_T0008011.1 MGP_129S1SvImJ_G0006538.1 mouse_genomes_project 4 139720226 139721227 - Gm13001 lincRNA lincRNA MGP_129S1SvImJ_T0066289.1 MGP_129S1SvImJ_G0028431.1 mouse_genomes_project 4 88554432 88555490 - MGP_129S1SvImJ_P0066289 Ifnab protein_coding protein_coding MGP_129S1SvImJ_T0066571.1 MGP_129S1SvImJ_G0028504.1 mouse_genomes_project 4 103435375 103476905 - Wdr78 protein_coding retained_intron MGP_129S1SvImJ_T0066572.1 MGP_129S1SvImJ_G0028504.1 mouse_genomes_project 4 103435375 103525987 - MGP_129S1SvImJ_P0066572 Wdr78 protein_coding protein_coding MGP_129S1SvImJ_T0066573.1 MGP_129S1SvImJ_G0028504.1 mouse_genomes_project 4 103435379 103526243 - MGP_129S1SvImJ_P0066573 Wdr78 protein_coding protein_coding MGP_129S1SvImJ_T0066574.1 MGP_129S1SvImJ_G0028504.1 mouse_genomes_project 4 103435379 103525912 - MGP_129S1SvImJ_P0066574 Wdr78 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066575.1 MGP_129S1SvImJ_G0028504.1 mouse_genomes_project 4 103435411 103479522 - Wdr78 protein_coding retained_intron MGP_129S1SvImJ_T0066576.1 MGP_129S1SvImJ_G0028504.1 mouse_genomes_project 4 103436582 103438900 - Wdr78 protein_coding processed_transcript MGP_129S1SvImJ_T0066577.1 MGP_129S1SvImJ_G0028504.1 mouse_genomes_project 4 103436601 103476726 - MGP_129S1SvImJ_P0066577 Wdr78 protein_coding protein_coding MGP_129S1SvImJ_T0066578.1 MGP_129S1SvImJ_G0028504.1 mouse_genomes_project 4 103489462 103499124 - MGP_129S1SvImJ_P0066578 Wdr78 protein_coding protein_coding MGP_129S1SvImJ_T0102538.1 MGP_129S1SvImJ_G0040371.1 mouse_genomes_project 4 116459440 116460126 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0014557.1 MGP_129S1SvImJ_G0012646.1 mouse_genomes_project 4 47808504 47899276 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010609.1 MGP_129S1SvImJ_G0008725.1 mouse_genomes_project 4 43738925 43738993 - Gm22518 miRNA miRNA MGP_129S1SvImJ_T0098363.1 MGP_129S1SvImJ_G0036448.1 mouse_genomes_project 4 98918715 98918803 + pseudogene pseudogene MGP_129S1SvImJ_T0099860.1 MGP_129S1SvImJ_G0037927.1 mouse_genomes_project 4 117587711 117587821 + Gm25137 snRNA snRNA MGP_129S1SvImJ_T0018128.1 MGP_129S1SvImJ_G0015576.1 mouse_genomes_project 4 127998249 127999887 + Gm12945 processed_transcript processed_transcript MGP_129S1SvImJ_T0007834.1 MGP_129S1SvImJ_G0006406.1 mouse_genomes_project 4 34658725 34696616 + Gm12371 lincRNA lincRNA MGP_129S1SvImJ_T0014738.1 MGP_129S1SvImJ_G0012827.1 mouse_genomes_project 4 116009775 116012604 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008034.1 MGP_129S1SvImJ_G0006560.1 mouse_genomes_project 4 153688468 153689159 - Gm13073 lincRNA lincRNA MGP_129S1SvImJ_T0101133.1 MGP_129S1SvImJ_G0039200.1 mouse_genomes_project 4 80901037 80901168 - Gm25803 snoRNA snoRNA MGP_129S1SvImJ_T0007841.1 MGP_129S1SvImJ_G0006413.1 mouse_genomes_project 4 41113224 41114707 + Gm26643 lincRNA lincRNA MGP_129S1SvImJ_T0067350.1 MGP_129S1SvImJ_G0028659.1 mouse_genomes_project 4 118893049 118896439 - MGP_129S1SvImJ_P0067350 Dph2 protein_coding protein_coding MGP_129S1SvImJ_T0067351.1 MGP_129S1SvImJ_G0028659.1 mouse_genomes_project 4 118893313 118896427 - Dph2 protein_coding retained_intron MGP_129S1SvImJ_T0067352.1 MGP_129S1SvImJ_G0028659.1 mouse_genomes_project 4 118893322 118896430 - MGP_129S1SvImJ_P0067352 Dph2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067353.1 MGP_129S1SvImJ_G0028659.1 mouse_genomes_project 4 118895484 118896393 - Dph2 protein_coding retained_intron MGP_129S1SvImJ_T0014536.1 MGP_129S1SvImJ_G0012625.1 mouse_genomes_project 4 39098249 39099208 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014584.1 MGP_129S1SvImJ_G0012673.1 mouse_genomes_project 4 54917853 54918169 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101170.1 MGP_129S1SvImJ_G0039237.1 mouse_genomes_project 4 139623840 139623969 + Gm23834 snoRNA snoRNA MGP_129S1SvImJ_T0067757.1 MGP_129S1SvImJ_G0028771.1 mouse_genomes_project 4 127757125 127794353 + MGP_129S1SvImJ_P0067757 Stk40 protein_coding protein_coding MGP_129S1SvImJ_T0067758.1 MGP_129S1SvImJ_G0028771.1 mouse_genomes_project 4 127757140 127794354 + MGP_129S1SvImJ_P0067758 Stk40 protein_coding protein_coding MGP_129S1SvImJ_T0067759.1 MGP_129S1SvImJ_G0028771.1 mouse_genomes_project 4 127757169 127778444 + MGP_129S1SvImJ_P0067759 Stk40 protein_coding protein_coding MGP_129S1SvImJ_T0067760.1 MGP_129S1SvImJ_G0028771.1 mouse_genomes_project 4 127757203 127770870 + Stk40 protein_coding processed_transcript MGP_129S1SvImJ_T0067761.1 MGP_129S1SvImJ_G0028771.1 mouse_genomes_project 4 127771443 127782297 + MGP_129S1SvImJ_P0067761 Stk40 protein_coding protein_coding MGP_129S1SvImJ_T0067762.1 MGP_129S1SvImJ_G0028771.1 mouse_genomes_project 4 127782147 127786127 + Stk40 protein_coding processed_transcript MGP_129S1SvImJ_T0014769.1 MGP_129S1SvImJ_G0012858.1 mouse_genomes_project 4 122446572 122450931 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068737.1 MGP_129S1SvImJ_G0028983.1 mouse_genomes_project 4 140102453 140216974 + MGP_129S1SvImJ_P0068737 Hspg2 protein_coding protein_coding MGP_129S1SvImJ_T0068738.1 MGP_129S1SvImJ_G0028983.1 mouse_genomes_project 4 140102487 140216973 + MGP_129S1SvImJ_P0068738 Hspg2 protein_coding protein_coding MGP_129S1SvImJ_T0068739.1 MGP_129S1SvImJ_G0028983.1 mouse_genomes_project 4 140215514 140216461 + Hspg2 protein_coding processed_transcript MGP_129S1SvImJ_T0007968.1 MGP_129S1SvImJ_G0006511.1 mouse_genomes_project 4 129595359 129596895 - 1700112K13Rik lincRNA lincRNA MGP_129S1SvImJ_T0067200.1 MGP_129S1SvImJ_G0028633.1 mouse_genomes_project 4 117625059 117626264 + MGP_129S1SvImJ_P0067200 Ccdc163 protein_coding protein_coding MGP_129S1SvImJ_T0067201.1 MGP_129S1SvImJ_G0028633.1 mouse_genomes_project 4 117625070 117626741 + MGP_129S1SvImJ_P0067201 Ccdc163 protein_coding protein_coding MGP_129S1SvImJ_T0067202.1 MGP_129S1SvImJ_G0028633.1 mouse_genomes_project 4 117625076 117626219 + Ccdc163 protein_coding processed_transcript MGP_129S1SvImJ_T0067203.1 MGP_129S1SvImJ_G0028633.1 mouse_genomes_project 4 117625085 117626963 + Ccdc163 protein_coding retained_intron MGP_129S1SvImJ_T0067204.1 MGP_129S1SvImJ_G0028633.1 mouse_genomes_project 4 117625165 117625967 + MGP_129S1SvImJ_P0067204 Ccdc163 protein_coding protein_coding MGP_129S1SvImJ_T0067205.1 MGP_129S1SvImJ_G0028633.1 mouse_genomes_project 4 117625390 117631188 + MGP_129S1SvImJ_P0067205 Ccdc163 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067206.1 MGP_129S1SvImJ_G0028633.1 mouse_genomes_project 4 117625478 117631191 + MGP_129S1SvImJ_P0067206 Ccdc163 protein_coding protein_coding MGP_129S1SvImJ_T0067207.1 MGP_129S1SvImJ_G0028633.1 mouse_genomes_project 4 117628723 117661600 + Ccdc163 protein_coding processed_transcript MGP_129S1SvImJ_T0067208.1 MGP_129S1SvImJ_G0028633.1 mouse_genomes_project 4 117629021 117672981 + Ccdc163 protein_coding processed_transcript MGP_129S1SvImJ_T0067209.1 MGP_129S1SvImJ_G0028633.1 mouse_genomes_project 4 117629088 117631183 + MGP_129S1SvImJ_P0067209 Ccdc163 protein_coding protein_coding MGP_129S1SvImJ_T0014421.1 MGP_129S1SvImJ_G0012510.1 mouse_genomes_project 4 7791289 7791850 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102518.1 MGP_129S1SvImJ_G0028365.1 mouse_genomes_project 4 62360805 62364241 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0067324.1 MGP_129S1SvImJ_G0028656.1 mouse_genomes_project 4 118869723 118875428 - MGP_129S1SvImJ_P0067324 Ccdc24 protein_coding protein_coding MGP_129S1SvImJ_T0067325.1 MGP_129S1SvImJ_G0028656.1 mouse_genomes_project 4 118870854 118872172 - Ccdc24 protein_coding processed_transcript MGP_129S1SvImJ_T0067326.1 MGP_129S1SvImJ_G0028656.1 mouse_genomes_project 4 118871947 118874494 - Ccdc24 protein_coding retained_intron MGP_129S1SvImJ_T0067328.1 MGP_129S1SvImJ_G0028656.1 mouse_genomes_project 4 118872458 118875752 - MGP_129S1SvImJ_P0067328 Ccdc24 protein_coding protein_coding MGP_129S1SvImJ_T0067329.1 MGP_129S1SvImJ_G0028656.1 mouse_genomes_project 4 118872707 118874300 - MGP_129S1SvImJ_P0067329 Ccdc24 protein_coding protein_coding MGP_129S1SvImJ_T0067330.1 MGP_129S1SvImJ_G0028656.1 mouse_genomes_project 4 118872822 118875718 - MGP_129S1SvImJ_P0067330 Ccdc24 protein_coding protein_coding MGP_129S1SvImJ_T0067331.1 MGP_129S1SvImJ_G0028656.1 mouse_genomes_project 4 118872963 118874528 - Ccdc24 protein_coding processed_transcript MGP_129S1SvImJ_T0067332.1 MGP_129S1SvImJ_G0028656.1 mouse_genomes_project 4 118873341 118875755 - MGP_129S1SvImJ_P0067332 Ccdc24 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067333.1 MGP_129S1SvImJ_G0028656.1 mouse_genomes_project 4 118873738 118875718 - MGP_129S1SvImJ_P0067333 Ccdc24 protein_coding protein_coding MGP_129S1SvImJ_T0098938.1 MGP_129S1SvImJ_G0037016.1 mouse_genomes_project 4 137867958 137868548 - Gm15979 sense_intronic sense_intronic MGP_129S1SvImJ_T0068625.1 MGP_129S1SvImJ_G0028952.1 mouse_genomes_project 4 138389676 138414570 + MGP_129S1SvImJ_P0068625 Cnr2 protein_coding protein_coding MGP_129S1SvImJ_T0068626.1 MGP_129S1SvImJ_G0028952.1 mouse_genomes_project 4 138406205 138414569 + MGP_129S1SvImJ_P0068626 Cnr2 protein_coding protein_coding MGP_129S1SvImJ_T0101124.1 MGP_129S1SvImJ_G0039191.1 mouse_genomes_project 4 63487358 63487487 + Gm23950 snoRNA snoRNA MGP_129S1SvImJ_T0101160.1 MGP_129S1SvImJ_G0039227.1 mouse_genomes_project 4 132908787 132908917 - Gm22660 snoRNA snoRNA MGP_129S1SvImJ_T0065549.1 MGP_129S1SvImJ_G0028244.1 mouse_genomes_project 4 43572583 43612112 + MGP_129S1SvImJ_P0065549 Dcaf10 protein_coding protein_coding MGP_129S1SvImJ_T0065550.1 MGP_129S1SvImJ_G0028244.1 mouse_genomes_project 4 43572602 43602833 + Dcaf10 protein_coding processed_transcript MGP_129S1SvImJ_T0065551.1 MGP_129S1SvImJ_G0028244.1 mouse_genomes_project 4 43572650 43612077 + MGP_129S1SvImJ_P0065551 Dcaf10 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0065552.1 MGP_129S1SvImJ_G0028244.1 mouse_genomes_project 4 43572664 43607309 + Dcaf10 protein_coding processed_transcript MGP_129S1SvImJ_T0065553.1 MGP_129S1SvImJ_G0028244.1 mouse_genomes_project 4 43601041 43608020 + MGP_129S1SvImJ_P0065553 Dcaf10 protein_coding protein_coding MGP_129S1SvImJ_T0004439.1 MGP_129S1SvImJ_G0003872.1 mouse_genomes_project 4 6063202 6078162 - Gm11817 antisense antisense MGP_129S1SvImJ_T0010623.1 MGP_129S1SvImJ_G0008739.1 mouse_genomes_project 4 98726539 98726665 - Gm22625 miRNA miRNA MGP_129S1SvImJ_T0018077.1 MGP_129S1SvImJ_G0015542.1 mouse_genomes_project 4 39469052 39474182 + Gm12404 processed_transcript processed_transcript MGP_129S1SvImJ_T0065997.1 MGP_129S1SvImJ_G0028364.1 mouse_genomes_project 4 62354927 62358558 + MGP_129S1SvImJ_P0065997 Orm1 protein_coding protein_coding MGP_129S1SvImJ_T0014506.1 MGP_129S1SvImJ_G0012595.1 mouse_genomes_project 4 30449412 30449754 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007917.1 MGP_129S1SvImJ_G0006477.1 mouse_genomes_project 4 101656852 101710585 + 0610043K17Rik lincRNA lincRNA MGP_129S1SvImJ_T0007919.1 MGP_129S1SvImJ_G0006477.1 mouse_genomes_project 4 101670459 101702476 + 0610043K17Rik lincRNA lincRNA MGP_129S1SvImJ_T0069123.1 MGP_129S1SvImJ_G0029078.1 mouse_genomes_project 4 147144035 147146844 + MGP_129S1SvImJ_P0069123 protein_coding protein_coding MGP_129S1SvImJ_T0066296.1 MGP_129S1SvImJ_G0028438.1 mouse_genomes_project 4 88772337 88772835 - MGP_129S1SvImJ_P0066296 4930553M12Rik protein_coding protein_coding MGP_129S1SvImJ_T0066634.1 MGP_129S1SvImJ_G0028521.1 mouse_genomes_project 4 107219102 107250062 - MGP_129S1SvImJ_P0066634 Lexm protein_coding protein_coding MGP_129S1SvImJ_T0066635.1 MGP_129S1SvImJ_G0028521.1 mouse_genomes_project 4 107219102 107250065 - MGP_129S1SvImJ_P0066635 Lexm protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066636.1 MGP_129S1SvImJ_G0028521.1 mouse_genomes_project 4 107219102 107237843 - MGP_129S1SvImJ_P0066636 Lexm protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066637.1 MGP_129S1SvImJ_G0028521.1 mouse_genomes_project 4 107219503 107250062 - MGP_129S1SvImJ_P0066637 Lexm protein_coding protein_coding MGP_129S1SvImJ_T0066762.1 MGP_129S1SvImJ_G0028542.1 mouse_genomes_project 4 108501854 108577214 + MGP_129S1SvImJ_P0066762 Lrp8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066763.1 MGP_129S1SvImJ_G0028542.1 mouse_genomes_project 4 108501870 108575863 + MGP_129S1SvImJ_P0066763 Lrp8 protein_coding protein_coding MGP_129S1SvImJ_T0066764.1 MGP_129S1SvImJ_G0028542.1 mouse_genomes_project 4 108501907 108576946 + MGP_129S1SvImJ_P0066764 Lrp8 protein_coding protein_coding MGP_129S1SvImJ_T0066765.1 MGP_129S1SvImJ_G0028542.1 mouse_genomes_project 4 108502006 108575863 + MGP_129S1SvImJ_P0066765 Lrp8 protein_coding protein_coding MGP_129S1SvImJ_T0066766.1 MGP_129S1SvImJ_G0028542.1 mouse_genomes_project 4 108502006 108575367 + MGP_129S1SvImJ_P0066766 Lrp8 protein_coding protein_coding MGP_129S1SvImJ_T0066767.1 MGP_129S1SvImJ_G0028542.1 mouse_genomes_project 4 108502435 108553317 + Lrp8 protein_coding processed_transcript MGP_129S1SvImJ_T0066768.1 MGP_129S1SvImJ_G0028542.1 mouse_genomes_project 4 108502844 108575863 + Lrp8 protein_coding processed_transcript MGP_129S1SvImJ_T0066769.1 MGP_129S1SvImJ_G0028542.1 mouse_genomes_project 4 108522746 108575863 + Lrp8 protein_coding processed_transcript MGP_129S1SvImJ_T0066770.1 MGP_129S1SvImJ_G0028542.1 mouse_genomes_project 4 108530563 108579887 + MGP_129S1SvImJ_P0066770 Lrp8 protein_coding protein_coding MGP_129S1SvImJ_T0066771.1 MGP_129S1SvImJ_G0028542.1 mouse_genomes_project 4 108548156 108550251 + Lrp8 protein_coding retained_intron MGP_129S1SvImJ_T0066772.1 MGP_129S1SvImJ_G0028542.1 mouse_genomes_project 4 108552082 108558817 + Lrp8 protein_coding processed_transcript MGP_129S1SvImJ_T0007810.1 MGP_129S1SvImJ_G0006384.1 mouse_genomes_project 4 7768362 7772558 + Gm11827 lincRNA lincRNA MGP_129S1SvImJ_T0007811.1 MGP_129S1SvImJ_G0006384.1 mouse_genomes_project 4 7769517 7772558 + Gm11827 lincRNA lincRNA MGP_129S1SvImJ_T0068923.1 MGP_129S1SvImJ_G0029024.1 mouse_genomes_project 4 142839165 142848526 - MGP_129S1SvImJ_P0068923 Klhdc7a protein_coding protein_coding MGP_129S1SvImJ_T0069703.1 MGP_129S1SvImJ_G0029205.1 mouse_genomes_project 4 159270036 159297910 - MGP_129S1SvImJ_P0069703 Plch2 protein_coding protein_coding MGP_129S1SvImJ_T0069704.1 MGP_129S1SvImJ_G0029205.1 mouse_genomes_project 4 159270047 159283109 - Plch2 protein_coding retained_intron MGP_129S1SvImJ_T0069705.1 MGP_129S1SvImJ_G0029205.1 mouse_genomes_project 4 159270288 159306392 - MGP_129S1SvImJ_P0069705 Plch2 protein_coding protein_coding MGP_129S1SvImJ_T0069706.1 MGP_129S1SvImJ_G0029205.1 mouse_genomes_project 4 159270288 159276739 - MGP_129S1SvImJ_P0069706 Plch2 protein_coding protein_coding MGP_129S1SvImJ_T0069707.1 MGP_129S1SvImJ_G0029205.1 mouse_genomes_project 4 159270288 159293933 - MGP_129S1SvImJ_P0069707 Plch2 protein_coding protein_coding MGP_129S1SvImJ_T0069708.1 MGP_129S1SvImJ_G0029205.1 mouse_genomes_project 4 159270294 159279567 - Plch2 protein_coding retained_intron MGP_129S1SvImJ_T0069709.1 MGP_129S1SvImJ_G0029205.1 mouse_genomes_project 4 159270298 159297910 - MGP_129S1SvImJ_P0069709 Plch2 protein_coding protein_coding MGP_129S1SvImJ_T0069710.1 MGP_129S1SvImJ_G0029205.1 mouse_genomes_project 4 159270583 159330051 - MGP_129S1SvImJ_P0069710 Plch2 protein_coding protein_coding MGP_129S1SvImJ_T0069711.1 MGP_129S1SvImJ_G0029205.1 mouse_genomes_project 4 159272620 159341652 - MGP_129S1SvImJ_P0069711 Plch2 protein_coding protein_coding MGP_129S1SvImJ_T0069712.1 MGP_129S1SvImJ_G0029205.1 mouse_genomes_project 4 159285088 159297910 - MGP_129S1SvImJ_P0069712 Plch2 protein_coding protein_coding MGP_129S1SvImJ_T0069713.1 MGP_129S1SvImJ_G0029205.1 mouse_genomes_project 4 159293996 159343878 - MGP_129S1SvImJ_P0069713 Plch2 protein_coding protein_coding MGP_129S1SvImJ_T0069714.1 MGP_129S1SvImJ_G0029205.1 mouse_genomes_project 4 159296002 159306388 - MGP_129S1SvImJ_P0069714 Plch2 protein_coding protein_coding MGP_129S1SvImJ_T0065651.1 MGP_129S1SvImJ_G0028269.1 mouse_genomes_project 4 45858544 45867182 + MGP_129S1SvImJ_P0065651 protein_coding protein_coding MGP_129S1SvImJ_T0065652.1 MGP_129S1SvImJ_G0028269.1 mouse_genomes_project 4 45858650 45867068 + MGP_129S1SvImJ_P0065652 protein_coding protein_coding MGP_129S1SvImJ_T0065653.1 MGP_129S1SvImJ_G0028269.1 mouse_genomes_project 4 45858694 45867034 + MGP_129S1SvImJ_P0065653 protein_coding protein_coding MGP_129S1SvImJ_T0065654.1 MGP_129S1SvImJ_G0028269.1 mouse_genomes_project 4 45858834 45864731 + protein_coding retained_intron MGP_129S1SvImJ_T0065506.1 MGP_129S1SvImJ_G0028236.1 mouse_genomes_project 4 42943881 42949974 + MGP_129S1SvImJ_P0065506 Zcchc7 protein_coding protein_coding MGP_129S1SvImJ_T0065507.1 MGP_129S1SvImJ_G0028236.1 mouse_genomes_project 4 42944572 43134428 + MGP_129S1SvImJ_P0065507 Zcchc7 protein_coding protein_coding MGP_129S1SvImJ_T0065508.1 MGP_129S1SvImJ_G0028236.1 mouse_genomes_project 4 42944592 43111797 + Zcchc7 protein_coding retained_intron MGP_129S1SvImJ_T0065509.1 MGP_129S1SvImJ_G0028236.1 mouse_genomes_project 4 42944643 42950231 + MGP_129S1SvImJ_P0065509 Zcchc7 protein_coding protein_coding MGP_129S1SvImJ_T0065510.1 MGP_129S1SvImJ_G0028236.1 mouse_genomes_project 4 42944651 43109617 + MGP_129S1SvImJ_P0065510 Zcchc7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065511.1 MGP_129S1SvImJ_G0028236.1 mouse_genomes_project 4 42948446 43112859 + Zcchc7 protein_coding retained_intron MGP_129S1SvImJ_T0065512.1 MGP_129S1SvImJ_G0028236.1 mouse_genomes_project 4 43107002 43133587 + Zcchc7 protein_coding processed_transcript MGP_129S1SvImJ_T0065513.1 MGP_129S1SvImJ_G0028236.1 mouse_genomes_project 4 43123917 43134440 + MGP_129S1SvImJ_P0065513 Zcchc7 protein_coding protein_coding MGP_129S1SvImJ_T0065514.1 MGP_129S1SvImJ_G0028236.1 mouse_genomes_project 4 43126794 43133587 + MGP_129S1SvImJ_P0065514 Zcchc7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0014739.1 MGP_129S1SvImJ_G0012828.1 mouse_genomes_project 4 116213981 116214354 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065600.1 MGP_129S1SvImJ_G0028255.1 mouse_genomes_project 4 44641963 44644768 + MGP_129S1SvImJ_P0065600 Foxe1 protein_coding protein_coding MGP_129S1SvImJ_T0068891.1 MGP_129S1SvImJ_G0029016.1 mouse_genomes_project 4 142179883 142184476 - MGP_129S1SvImJ_P0068891 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0068892.1 MGP_129S1SvImJ_G0029016.1 mouse_genomes_project 4 142179923 142184476 - MGP_129S1SvImJ_P0068892 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0068893.1 MGP_129S1SvImJ_G0029016.1 mouse_genomes_project 4 142180341 142181801 - protein_coding retained_intron MGP_129S1SvImJ_T0068894.1 MGP_129S1SvImJ_G0029016.1 mouse_genomes_project 4 142180877 142184491 - MGP_129S1SvImJ_P0068894 protein_coding protein_coding MGP_129S1SvImJ_T0068895.1 MGP_129S1SvImJ_G0029016.1 mouse_genomes_project 4 142180939 142184713 - protein_coding retained_intron MGP_129S1SvImJ_T0068896.1 MGP_129S1SvImJ_G0029016.1 mouse_genomes_project 4 142182054 142184490 - protein_coding retained_intron MGP_129S1SvImJ_T0014514.1 MGP_129S1SvImJ_G0012603.1 mouse_genomes_project 4 32440898 32441566 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014776.1 MGP_129S1SvImJ_G0012865.1 mouse_genomes_project 4 123984922 123990182 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014736.1 MGP_129S1SvImJ_G0012825.1 mouse_genomes_project 4 112648192 112649238 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068637.1 MGP_129S1SvImJ_G0028955.1 mouse_genomes_project 4 138458718 138463159 + MGP_129S1SvImJ_P0068637 Gale protein_coding protein_coding MGP_129S1SvImJ_T0068638.1 MGP_129S1SvImJ_G0028955.1 mouse_genomes_project 4 138458748 138460620 + MGP_129S1SvImJ_P0068638 Gale protein_coding protein_coding MGP_129S1SvImJ_T0068639.1 MGP_129S1SvImJ_G0028955.1 mouse_genomes_project 4 138458751 138461856 + Gale protein_coding retained_intron MGP_129S1SvImJ_T0068640.1 MGP_129S1SvImJ_G0028955.1 mouse_genomes_project 4 138458808 138460610 + MGP_129S1SvImJ_P0068640 Gale protein_coding protein_coding MGP_129S1SvImJ_T0068641.1 MGP_129S1SvImJ_G0028955.1 mouse_genomes_project 4 138460156 138463159 + MGP_129S1SvImJ_P0068641 Gale protein_coding protein_coding MGP_129S1SvImJ_T0068642.1 MGP_129S1SvImJ_G0028955.1 mouse_genomes_project 4 138460186 138461910 + Gale protein_coding retained_intron MGP_129S1SvImJ_T0068643.1 MGP_129S1SvImJ_G0028955.1 mouse_genomes_project 4 138460609 138462684 + Gale protein_coding retained_intron MGP_129S1SvImJ_T0014472.1 MGP_129S1SvImJ_G0012561.1 mouse_genomes_project 4 22399183 22399877 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066701.1 MGP_129S1SvImJ_G0028531.1 mouse_genomes_project 4 107766637 107777660 + MGP_129S1SvImJ_P0066701 Cdcp2 protein_coding protein_coding MGP_129S1SvImJ_T0068304.1 MGP_129S1SvImJ_G0028879.1 mouse_genomes_project 4 134955574 134964455 + Rpa2 protein_coding processed_transcript MGP_129S1SvImJ_T0068305.1 MGP_129S1SvImJ_G0028879.1 mouse_genomes_project 4 134955577 134966492 + MGP_129S1SvImJ_P0068305 Rpa2 protein_coding protein_coding MGP_129S1SvImJ_T0068306.1 MGP_129S1SvImJ_G0028879.1 mouse_genomes_project 4 134955618 134961980 + Rpa2 protein_coding retained_intron MGP_129S1SvImJ_T0068307.1 MGP_129S1SvImJ_G0028879.1 mouse_genomes_project 4 134955877 134959175 + Rpa2 protein_coding retained_intron MGP_129S1SvImJ_T0068308.1 MGP_129S1SvImJ_G0028879.1 mouse_genomes_project 4 134957570 134959363 + Rpa2 protein_coding retained_intron MGP_129S1SvImJ_T0068309.1 MGP_129S1SvImJ_G0028879.1 mouse_genomes_project 4 134962872 134964901 + MGP_129S1SvImJ_P0068309 Rpa2 protein_coding protein_coding MGP_129S1SvImJ_T0065455.1 MGP_129S1SvImJ_G0028232.1 mouse_genomes_project 4 42174860 42231070 - MGP_129S1SvImJ_P0065455 Gne protein_coding protein_coding MGP_129S1SvImJ_T0065456.1 MGP_129S1SvImJ_G0028232.1 mouse_genomes_project 4 42177595 42197383 - MGP_129S1SvImJ_P0065456 Gne protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065457.1 MGP_129S1SvImJ_G0028232.1 mouse_genomes_project 4 42177611 42215094 - MGP_129S1SvImJ_P0065457 Gne protein_coding protein_coding MGP_129S1SvImJ_T0065458.1 MGP_129S1SvImJ_G0028232.1 mouse_genomes_project 4 42177615 42207947 - MGP_129S1SvImJ_P0065458 Gne protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065459.1 MGP_129S1SvImJ_G0028232.1 mouse_genomes_project 4 42177743 42207987 - MGP_129S1SvImJ_P0065459 Gne protein_coding protein_coding MGP_129S1SvImJ_T0065460.1 MGP_129S1SvImJ_G0028232.1 mouse_genomes_project 4 42188040 42214940 - MGP_129S1SvImJ_P0065460 Gne protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065461.1 MGP_129S1SvImJ_G0028232.1 mouse_genomes_project 4 42194959 42208088 - MGP_129S1SvImJ_P0065461 Gne protein_coding protein_coding MGP_129S1SvImJ_T0065462.1 MGP_129S1SvImJ_G0028232.1 mouse_genomes_project 4 42197390 42205894 - Gne protein_coding retained_intron MGP_129S1SvImJ_T0065463.1 MGP_129S1SvImJ_G0028232.1 mouse_genomes_project 4 42201786 42231060 - Gne protein_coding retained_intron MGP_129S1SvImJ_T0065464.1 MGP_129S1SvImJ_G0028232.1 mouse_genomes_project 4 42201954 42230816 - MGP_129S1SvImJ_P0065464 Gne protein_coding protein_coding MGP_129S1SvImJ_T0065465.1 MGP_129S1SvImJ_G0028232.1 mouse_genomes_project 4 42202058 42215052 - Gne protein_coding processed_transcript MGP_129S1SvImJ_T0065466.1 MGP_129S1SvImJ_G0028232.1 mouse_genomes_project 4 42202077 42214918 - MGP_129S1SvImJ_P0065466 Gne protein_coding protein_coding MGP_129S1SvImJ_T0065467.1 MGP_129S1SvImJ_G0028232.1 mouse_genomes_project 4 42202189 42215333 - MGP_129S1SvImJ_P0065467 Gne protein_coding protein_coding MGP_129S1SvImJ_T0065468.1 MGP_129S1SvImJ_G0028232.1 mouse_genomes_project 4 42202198 42215334 - MGP_129S1SvImJ_P0065468 Gne protein_coding protein_coding MGP_129S1SvImJ_T0067590.1 MGP_129S1SvImJ_G0028721.1 mouse_genomes_project 4 122413995 122417571 - MGP_129S1SvImJ_P0067590 Tmco2 protein_coding protein_coding MGP_129S1SvImJ_T0004523.1 MGP_129S1SvImJ_G0003934.1 mouse_genomes_project 4 110779177 110780252 - Dmrta2os antisense antisense MGP_129S1SvImJ_T0004524.1 MGP_129S1SvImJ_G0003934.1 mouse_genomes_project 4 110779186 110779930 - Dmrta2os antisense antisense MGP_129S1SvImJ_T0065417.1 MGP_129S1SvImJ_G0028218.1 mouse_genomes_project 4 41784562 41785387 - MGP_129S1SvImJ_P0065417 Spag8 protein_coding protein_coding MGP_129S1SvImJ_T0065418.1 MGP_129S1SvImJ_G0028218.1 mouse_genomes_project 4 41784562 41786780 - MGP_129S1SvImJ_P0065418 Spag8 protein_coding protein_coding MGP_129S1SvImJ_T0065419.1 MGP_129S1SvImJ_G0028218.1 mouse_genomes_project 4 41784903 41786822 - MGP_129S1SvImJ_P0065419 Spag8 protein_coding protein_coding MGP_129S1SvImJ_T0064632.1 MGP_129S1SvImJ_G0028040.1 mouse_genomes_project 4 5274099 5343627 + Chd7 protein_coding retained_intron MGP_129S1SvImJ_T0064633.1 MGP_129S1SvImJ_G0028040.1 mouse_genomes_project 4 5274312 5373213 + MGP_129S1SvImJ_P0064633 Chd7 protein_coding protein_coding MGP_129S1SvImJ_T0064634.1 MGP_129S1SvImJ_G0028040.1 mouse_genomes_project 4 5274763 5456489 + MGP_129S1SvImJ_P0064634 Chd7 protein_coding protein_coding MGP_129S1SvImJ_T0064635.1 MGP_129S1SvImJ_G0028040.1 mouse_genomes_project 4 5275214 5457337 + MGP_129S1SvImJ_P0064635 Chd7 protein_coding protein_coding MGP_129S1SvImJ_T0064636.1 MGP_129S1SvImJ_G0028040.1 mouse_genomes_project 4 5294242 5339283 + MGP_129S1SvImJ_P0064636 Chd7 protein_coding protein_coding MGP_129S1SvImJ_T0064637.1 MGP_129S1SvImJ_G0028040.1 mouse_genomes_project 4 5339158 5456903 + MGP_129S1SvImJ_P0064637 Chd7 protein_coding protein_coding MGP_129S1SvImJ_T0064638.1 MGP_129S1SvImJ_G0028040.1 mouse_genomes_project 4 5339225 5456333 + MGP_129S1SvImJ_P0064638 Chd7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0064639.1 MGP_129S1SvImJ_G0028040.1 mouse_genomes_project 4 5429958 5434348 + Chd7 protein_coding processed_transcript MGP_129S1SvImJ_T0098591.1 MGP_129S1SvImJ_G0036676.1 mouse_genomes_project 4 81459956 81460067 + n-R5s187 rRNA rRNA MGP_129S1SvImJ_T0007835.1 MGP_129S1SvImJ_G0006407.1 mouse_genomes_project 4 34971241 35056526 + Gm12374 lincRNA lincRNA MGP_129S1SvImJ_T0068826.1 MGP_129S1SvImJ_G0028997.1 mouse_genomes_project 4 141178339 141185976 + MGP_129S1SvImJ_P0068826 Mul1 protein_coding protein_coding MGP_129S1SvImJ_T0068827.1 MGP_129S1SvImJ_G0028997.1 mouse_genomes_project 4 141178345 141185973 + MGP_129S1SvImJ_P0068827 Mul1 protein_coding protein_coding MGP_129S1SvImJ_T0068828.1 MGP_129S1SvImJ_G0028997.1 mouse_genomes_project 4 141178391 141182680 + MGP_129S1SvImJ_P0068828 Mul1 protein_coding protein_coding MGP_129S1SvImJ_T0010642.1 MGP_129S1SvImJ_G0008758.1 mouse_genomes_project 4 131491602 131491731 - Mir8119 miRNA miRNA MGP_129S1SvImJ_T0004437.1 MGP_129S1SvImJ_G0003871.1 mouse_genomes_project 4 5908927 5912302 - Gm11816 antisense antisense MGP_129S1SvImJ_T0004438.1 MGP_129S1SvImJ_G0003871.1 mouse_genomes_project 4 5910782 5912244 - Gm11816 antisense antisense MGP_129S1SvImJ_T0068147.1 MGP_129S1SvImJ_G0028849.1 mouse_genomes_project 4 132315124 132321998 + MGP_129S1SvImJ_P0068147 Fabp3 protein_coding protein_coding MGP_129S1SvImJ_T0010612.1 MGP_129S1SvImJ_G0008728.1 mouse_genomes_project 4 57273468 57273555 - Mir3095 miRNA miRNA MGP_129S1SvImJ_T0004599.1 MGP_129S1SvImJ_G0003994.1 mouse_genomes_project 4 145326220 145329754 + Gm13062 antisense antisense MGP_129S1SvImJ_T0068183.1 MGP_129S1SvImJ_G0028857.1 mouse_genomes_project 4 133864799 133942385 - MGP_129S1SvImJ_P0068183 Ptpru protein_coding unknown_likely_coding MGP_129S1SvImJ_T0068184.1 MGP_129S1SvImJ_G0028857.1 mouse_genomes_project 4 133864803 133942517 - MGP_129S1SvImJ_P0068184 Ptpru protein_coding protein_coding MGP_129S1SvImJ_T0068185.1 MGP_129S1SvImJ_G0028857.1 mouse_genomes_project 4 133864804 133865268 - Ptpru protein_coding processed_transcript MGP_129S1SvImJ_T0068186.1 MGP_129S1SvImJ_G0028857.1 mouse_genomes_project 4 133865844 133942460 - MGP_129S1SvImJ_P0068186 Ptpru protein_coding protein_coding MGP_129S1SvImJ_T0068187.1 MGP_129S1SvImJ_G0028857.1 mouse_genomes_project 4 133868482 133942481 - Ptpru protein_coding processed_transcript MGP_129S1SvImJ_T0068188.1 MGP_129S1SvImJ_G0028857.1 mouse_genomes_project 4 133881081 133925761 - MGP_129S1SvImJ_P0068188 Ptpru protein_coding protein_coding MGP_129S1SvImJ_T0068189.1 MGP_129S1SvImJ_G0028857.1 mouse_genomes_project 4 133886384 133903883 - Ptpru protein_coding processed_transcript MGP_129S1SvImJ_T0068190.1 MGP_129S1SvImJ_G0028857.1 mouse_genomes_project 4 133893018 133897790 - Ptpru protein_coding retained_intron MGP_129S1SvImJ_T0068191.1 MGP_129S1SvImJ_G0028857.1 mouse_genomes_project 4 133900626 133904507 - Ptpru protein_coding retained_intron MGP_129S1SvImJ_T0066148.1 MGP_129S1SvImJ_G0028402.1 mouse_genomes_project 4 82798220 82913636 - MGP_129S1SvImJ_P0066148 Ttc39b protein_coding protein_coding MGP_129S1SvImJ_T0066149.1 MGP_129S1SvImJ_G0028402.1 mouse_genomes_project 4 82804350 82811100 - Ttc39b protein_coding retained_intron MGP_129S1SvImJ_T0066150.1 MGP_129S1SvImJ_G0028402.1 mouse_genomes_project 4 82817692 82913620 - MGP_129S1SvImJ_P0066150 Ttc39b protein_coding protein_coding MGP_129S1SvImJ_T0066151.1 MGP_129S1SvImJ_G0028402.1 mouse_genomes_project 4 82826689 82846332 - Ttc39b protein_coding processed_transcript MGP_129S1SvImJ_T0066152.1 MGP_129S1SvImJ_G0028402.1 mouse_genomes_project 4 82832062 82865419 - MGP_129S1SvImJ_P0066152 Ttc39b protein_coding protein_coding MGP_129S1SvImJ_T0066153.1 MGP_129S1SvImJ_G0028402.1 mouse_genomes_project 4 82839520 82913570 - MGP_129S1SvImJ_P0066153 Ttc39b protein_coding protein_coding MGP_129S1SvImJ_T0066154.1 MGP_129S1SvImJ_G0028402.1 mouse_genomes_project 4 82839651 82859706 - MGP_129S1SvImJ_P0066154 Ttc39b protein_coding protein_coding MGP_129S1SvImJ_T0014439.1 MGP_129S1SvImJ_G0012528.1 mouse_genomes_project 4 13007810 13007940 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065861.1 MGP_129S1SvImJ_G0028327.1 mouse_genomes_project 4 57664936 57784415 - MGP_129S1SvImJ_P0065861 AI314180 protein_coding protein_coding MGP_129S1SvImJ_T0065862.1 MGP_129S1SvImJ_G0028327.1 mouse_genomes_project 4 57677652 57678870 - AI314180 protein_coding processed_transcript MGP_129S1SvImJ_T0065863.1 MGP_129S1SvImJ_G0028327.1 mouse_genomes_project 4 57678458 57783596 - MGP_129S1SvImJ_P0065863 AI314180 protein_coding protein_coding MGP_129S1SvImJ_T0065864.1 MGP_129S1SvImJ_G0028327.1 mouse_genomes_project 4 57682323 57686571 - AI314180 protein_coding processed_transcript MGP_129S1SvImJ_T0065865.1 MGP_129S1SvImJ_G0028327.1 mouse_genomes_project 4 57686321 57700939 - AI314180 protein_coding processed_transcript MGP_129S1SvImJ_T0065866.1 MGP_129S1SvImJ_G0028327.1 mouse_genomes_project 4 57697428 57783593 - MGP_129S1SvImJ_P0065866 AI314180 protein_coding protein_coding MGP_129S1SvImJ_T0065867.1 MGP_129S1SvImJ_G0028327.1 mouse_genomes_project 4 57699580 57701788 - AI314180 protein_coding processed_transcript MGP_129S1SvImJ_T0065868.1 MGP_129S1SvImJ_G0028327.1 mouse_genomes_project 4 57702946 57712035 - AI314180 protein_coding processed_transcript MGP_129S1SvImJ_T0065869.1 MGP_129S1SvImJ_G0028327.1 mouse_genomes_project 4 57711304 57784370 - MGP_129S1SvImJ_P0065869 AI314180 protein_coding protein_coding MGP_129S1SvImJ_T0065870.1 MGP_129S1SvImJ_G0028327.1 mouse_genomes_project 4 57730238 57784415 - MGP_129S1SvImJ_P0065870 AI314180 protein_coding protein_coding MGP_129S1SvImJ_T0065871.1 MGP_129S1SvImJ_G0028327.1 mouse_genomes_project 4 57739708 57783568 - MGP_129S1SvImJ_P0065871 AI314180 protein_coding protein_coding MGP_129S1SvImJ_T0014495.1 MGP_129S1SvImJ_G0012584.1 mouse_genomes_project 4 26824604 26825112 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004457.1 MGP_129S1SvImJ_G0003886.1 mouse_genomes_project 4 39465781 39467288 + Fam219aos antisense antisense MGP_129S1SvImJ_T0067794.1 MGP_129S1SvImJ_G0028777.1 mouse_genomes_project 4 127958446 127988979 + MGP_129S1SvImJ_P0067794 Col8a2 protein_coding protein_coding MGP_129S1SvImJ_T0067795.1 MGP_129S1SvImJ_G0028777.1 mouse_genomes_project 4 127972331 127984433 + MGP_129S1SvImJ_P0067795 Col8a2 protein_coding protein_coding MGP_129S1SvImJ_T0011581.1 MGP_129S1SvImJ_G0009697.1 mouse_genomes_project 4 32270125 32270432 + Gm22849 misc_RNA misc_RNA MGP_129S1SvImJ_T0004592.1 MGP_129S1SvImJ_G0003990.1 mouse_genomes_project 4 144994090 145011651 + Fhad1os2 antisense antisense MGP_129S1SvImJ_T0014550.1 MGP_129S1SvImJ_G0012639.1 mouse_genomes_project 4 45537359 45537494 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068610.1 MGP_129S1SvImJ_G0028948.1 mouse_genomes_project 4 138191891 138216214 + MGP_129S1SvImJ_P0068610 Il22ra1 protein_coding protein_coding MGP_129S1SvImJ_T0004583.1 MGP_129S1SvImJ_G0003983.1 mouse_genomes_project 4 143039616 143041377 + Gm13029 antisense antisense MGP_129S1SvImJ_T0007839.1 MGP_129S1SvImJ_G0006411.1 mouse_genomes_project 4 38608763 38611008 - Gm6297 lincRNA lincRNA MGP_129S1SvImJ_T0004508.1 MGP_129S1SvImJ_G0003924.1 mouse_genomes_project 4 103362954 103388306 - Gm12709 antisense antisense MGP_129S1SvImJ_T0014672.1 MGP_129S1SvImJ_G0012761.1 mouse_genomes_project 4 91684628 91685962 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099857.1 MGP_129S1SvImJ_G0037924.1 mouse_genomes_project 4 109284891 109284998 - Gm22345 snRNA snRNA MGP_129S1SvImJ_T0011596.1 MGP_129S1SvImJ_G0009712.1 mouse_genomes_project 4 101870047 101870321 + Gm22533 misc_RNA misc_RNA MGP_129S1SvImJ_T0014616.1 MGP_129S1SvImJ_G0012705.1 mouse_genomes_project 4 72114212 72114810 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069617.1 MGP_129S1SvImJ_G0029189.1 mouse_genomes_project 4 158254760 158259907 - MGP_129S1SvImJ_P0069617 Smim1 protein_coding protein_coding MGP_129S1SvImJ_T0069618.1 MGP_129S1SvImJ_G0029189.1 mouse_genomes_project 4 158254878 158260203 - MGP_129S1SvImJ_P0069618 Smim1 protein_coding protein_coding MGP_129S1SvImJ_T0069619.1 MGP_129S1SvImJ_G0029189.1 mouse_genomes_project 4 158254878 158260257 - MGP_129S1SvImJ_P0069619 Smim1 protein_coding protein_coding MGP_129S1SvImJ_T0069620.1 MGP_129S1SvImJ_G0029189.1 mouse_genomes_project 4 158255746 158260521 - MGP_129S1SvImJ_P0069620 Smim1 protein_coding protein_coding MGP_129S1SvImJ_T0069621.1 MGP_129S1SvImJ_G0029189.1 mouse_genomes_project 4 158255751 158260443 - MGP_129S1SvImJ_P0069621 Smim1 protein_coding protein_coding MGP_129S1SvImJ_T0069622.1 MGP_129S1SvImJ_G0029189.1 mouse_genomes_project 4 158257600 158260227 - MGP_129S1SvImJ_P0069622 Smim1 protein_coding protein_coding MGP_129S1SvImJ_T0069623.1 MGP_129S1SvImJ_G0029189.1 mouse_genomes_project 4 158257600 158260158 - MGP_129S1SvImJ_P0069623 Smim1 protein_coding protein_coding MGP_129S1SvImJ_T0069624.1 MGP_129S1SvImJ_G0029189.1 mouse_genomes_project 4 158257600 158259907 - MGP_129S1SvImJ_P0069624 Smim1 protein_coding protein_coding MGP_129S1SvImJ_T0069625.1 MGP_129S1SvImJ_G0029189.1 mouse_genomes_project 4 158257601 158258646 - MGP_129S1SvImJ_P0069625 Smim1 protein_coding protein_coding MGP_129S1SvImJ_T0069626.1 MGP_129S1SvImJ_G0029189.1 mouse_genomes_project 4 158257601 158260441 - MGP_129S1SvImJ_P0069626 Smim1 protein_coding protein_coding MGP_129S1SvImJ_T0069627.1 MGP_129S1SvImJ_G0029189.1 mouse_genomes_project 4 158257871 158260328 - MGP_129S1SvImJ_P0069627 Smim1 protein_coding protein_coding MGP_129S1SvImJ_T0069628.1 MGP_129S1SvImJ_G0029189.1 mouse_genomes_project 4 158257989 158259954 - MGP_129S1SvImJ_P0069628 Smim1 protein_coding protein_coding MGP_129S1SvImJ_T0069629.1 MGP_129S1SvImJ_G0029189.1 mouse_genomes_project 4 158258014 158258614 - MGP_129S1SvImJ_P0069629 Smim1 protein_coding protein_coding MGP_129S1SvImJ_T0069630.1 MGP_129S1SvImJ_G0029189.1 mouse_genomes_project 4 158259596 158260203 - Smim1 protein_coding processed_transcript MGP_129S1SvImJ_T0014645.1 MGP_129S1SvImJ_G0012734.1 mouse_genomes_project 4 81266231 81266954 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014532.1 MGP_129S1SvImJ_G0012621.1 mouse_genomes_project 4 37949550 37949968 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066073.1 MGP_129S1SvImJ_G0028389.1 mouse_genomes_project 4 73249794 73457300 + MGP_129S1SvImJ_P0066073 Frmd3 protein_coding protein_coding MGP_129S1SvImJ_T0066074.1 MGP_129S1SvImJ_G0028389.1 mouse_genomes_project 4 73249796 73443476 + MGP_129S1SvImJ_P0066074 Frmd3 protein_coding protein_coding MGP_129S1SvImJ_T0066075.1 MGP_129S1SvImJ_G0028389.1 mouse_genomes_project 4 73421201 73442549 + Frmd3 protein_coding processed_transcript MGP_129S1SvImJ_T0099827.1 MGP_129S1SvImJ_G0037894.1 mouse_genomes_project 4 41292250 41292315 - Gm25010 snRNA snRNA MGP_129S1SvImJ_T0065738.1 MGP_129S1SvImJ_G0028295.1 mouse_genomes_project 4 51580011 51580956 + MGP_129S1SvImJ_P0065738 Olfr270 protein_coding protein_coding MGP_129S1SvImJ_T0065739.1 MGP_129S1SvImJ_G0028295.1 mouse_genomes_project 4 51580017 51580956 + MGP_129S1SvImJ_P0065739 Olfr270 protein_coding protein_coding MGP_129S1SvImJ_T0069391.1 MGP_129S1SvImJ_G0029148.1 mouse_genomes_project 4 153901072 153924653 - MGP_129S1SvImJ_P0069391 H6pd protein_coding protein_coding MGP_129S1SvImJ_T0069392.1 MGP_129S1SvImJ_G0029148.1 mouse_genomes_project 4 153901072 153931798 - MGP_129S1SvImJ_P0069392 H6pd protein_coding protein_coding MGP_129S1SvImJ_T0069393.1 MGP_129S1SvImJ_G0029148.1 mouse_genomes_project 4 153917374 153922788 - MGP_129S1SvImJ_P0069393 H6pd protein_coding protein_coding MGP_129S1SvImJ_T0069394.1 MGP_129S1SvImJ_G0029148.1 mouse_genomes_project 4 153921306 153922813 - H6pd protein_coding processed_transcript MGP_129S1SvImJ_T0014548.1 MGP_129S1SvImJ_G0012637.1 mouse_genomes_project 4 45399565 45399928 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069054.1 MGP_129S1SvImJ_G0029053.1 mouse_genomes_project 4 144708790 144750265 - MGP_129S1SvImJ_P0069054 Plekhm2 protein_coding protein_coding MGP_129S1SvImJ_T0069055.1 MGP_129S1SvImJ_G0029053.1 mouse_genomes_project 4 144708790 144751046 - MGP_129S1SvImJ_P0069055 Plekhm2 protein_coding protein_coding MGP_129S1SvImJ_T0069056.1 MGP_129S1SvImJ_G0029053.1 mouse_genomes_project 4 144711389 144712588 - Plekhm2 protein_coding retained_intron MGP_129S1SvImJ_T0069057.1 MGP_129S1SvImJ_G0029053.1 mouse_genomes_project 4 144713498 144714099 - Plekhm2 protein_coding retained_intron MGP_129S1SvImJ_T0069058.1 MGP_129S1SvImJ_G0029053.1 mouse_genomes_project 4 144715533 144725258 - Plekhm2 protein_coding retained_intron MGP_129S1SvImJ_T0069059.1 MGP_129S1SvImJ_G0029053.1 mouse_genomes_project 4 144724379 144725825 - Plekhm2 protein_coding retained_intron MGP_129S1SvImJ_T0001441.1 MGP_129S1SvImJ_G0001363.1 mouse_genomes_project 4 125784597 125785863 - TEC TEC MGP_129S1SvImJ_T0065766.1 MGP_129S1SvImJ_G0028303.1 mouse_genomes_project 4 52480293 52524031 + MGP_129S1SvImJ_P0065766 Tmem38b protein_coding protein_coding MGP_129S1SvImJ_T0065767.1 MGP_129S1SvImJ_G0028303.1 mouse_genomes_project 4 52480303 52486907 + Tmem38b protein_coding processed_transcript MGP_129S1SvImJ_T0065768.1 MGP_129S1SvImJ_G0028303.1 mouse_genomes_project 4 52480305 52506079 + Tmem38b protein_coding processed_transcript MGP_129S1SvImJ_T0065769.1 MGP_129S1SvImJ_G0028303.1 mouse_genomes_project 4 52498670 52516414 + MGP_129S1SvImJ_P0065769 Tmem38b protein_coding protein_coding MGP_129S1SvImJ_T0099883.1 MGP_129S1SvImJ_G0037950.1 mouse_genomes_project 4 139939507 139939563 + Gm25772 snRNA snRNA MGP_129S1SvImJ_T0067096.1 MGP_129S1SvImJ_G0028613.1 mouse_genomes_project 4 116760112 116770614 - MGP_129S1SvImJ_P0067096 Dmbx1 protein_coding protein_coding MGP_129S1SvImJ_T0067097.1 MGP_129S1SvImJ_G0028613.1 mouse_genomes_project 4 116760112 116784774 - MGP_129S1SvImJ_P0067097 Dmbx1 protein_coding protein_coding MGP_129S1SvImJ_T0067098.1 MGP_129S1SvImJ_G0028613.1 mouse_genomes_project 4 116760113 116784774 - MGP_129S1SvImJ_P0067098 Dmbx1 protein_coding protein_coding MGP_129S1SvImJ_T0069189.1 MGP_129S1SvImJ_G0029110.1 mouse_genomes_project 4 151593611 151620531 - MGP_129S1SvImJ_P0069189 Plod1 protein_coding protein_coding MGP_129S1SvImJ_T0069190.1 MGP_129S1SvImJ_G0029110.1 mouse_genomes_project 4 151599441 151604733 - MGP_129S1SvImJ_P0069190 Plod1 protein_coding protein_coding MGP_129S1SvImJ_T0069191.1 MGP_129S1SvImJ_G0029110.1 mouse_genomes_project 4 151606089 151620506 - Plod1 protein_coding retained_intron MGP_129S1SvImJ_T0069192.1 MGP_129S1SvImJ_G0029110.1 mouse_genomes_project 4 151606476 151607369 - Plod1 protein_coding retained_intron MGP_129S1SvImJ_T0069193.1 MGP_129S1SvImJ_G0029110.1 mouse_genomes_project 4 151611305 151620489 - MGP_129S1SvImJ_P0069193 Plod1 protein_coding protein_coding MGP_129S1SvImJ_T0069194.1 MGP_129S1SvImJ_G0029110.1 mouse_genomes_project 4 151615402 151620472 - Plod1 protein_coding processed_transcript MGP_129S1SvImJ_T0065578.1 MGP_129S1SvImJ_G0028251.1 mouse_genomes_project 4 44312432 44397925 + MGP_129S1SvImJ_P0065578 Tmod1 protein_coding protein_coding MGP_129S1SvImJ_T0065579.1 MGP_129S1SvImJ_G0028251.1 mouse_genomes_project 4 44312706 44370547 + MGP_129S1SvImJ_P0065579 Tmod1 protein_coding protein_coding MGP_129S1SvImJ_T0065580.1 MGP_129S1SvImJ_G0028251.1 mouse_genomes_project 4 44355136 44379410 + Tmod1 protein_coding processed_transcript MGP_129S1SvImJ_T0065581.1 MGP_129S1SvImJ_G0028251.1 mouse_genomes_project 4 44362562 44370531 + Tmod1 protein_coding processed_transcript MGP_129S1SvImJ_T0065582.1 MGP_129S1SvImJ_G0028251.1 mouse_genomes_project 4 44379944 44395135 + Tmod1 protein_coding processed_transcript MGP_129S1SvImJ_T0014460.1 MGP_129S1SvImJ_G0012549.1 mouse_genomes_project 4 19054088 19055516 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008037.1 MGP_129S1SvImJ_G0006563.1 mouse_genomes_project 4 154656857 154668934 - Gm16079 lincRNA lincRNA MGP_129S1SvImJ_T0067648.1 MGP_129S1SvImJ_G0028741.1 mouse_genomes_project 4 124796089 125157622 - MGP_129S1SvImJ_P0067648 Macf1 protein_coding protein_coding MGP_129S1SvImJ_T0067649.1 MGP_129S1SvImJ_G0028741.1 mouse_genomes_project 4 124796089 124816191 - MGP_129S1SvImJ_P0067649 Macf1 protein_coding protein_coding MGP_129S1SvImJ_T0067650.1 MGP_129S1SvImJ_G0028741.1 mouse_genomes_project 4 124796172 124812722 - MGP_129S1SvImJ_P0067650 Macf1 protein_coding protein_coding MGP_129S1SvImJ_T0067651.1 MGP_129S1SvImJ_G0028741.1 mouse_genomes_project 4 124796172 124956478 - MGP_129S1SvImJ_P0067651 Macf1 protein_coding protein_coding MGP_129S1SvImJ_T0067652.1 MGP_129S1SvImJ_G0028741.1 mouse_genomes_project 4 124796172 124927156 - MGP_129S1SvImJ_P0067652 Macf1 protein_coding protein_coding MGP_129S1SvImJ_T0067653.1 MGP_129S1SvImJ_G0028741.1 mouse_genomes_project 4 124796172 124818626 - MGP_129S1SvImJ_P0067653 Macf1 protein_coding protein_coding MGP_129S1SvImJ_T0067654.1 MGP_129S1SvImJ_G0028741.1 mouse_genomes_project 4 124796172 125003957 - MGP_129S1SvImJ_P0067654 Macf1 protein_coding protein_coding MGP_129S1SvImJ_T0067655.1 MGP_129S1SvImJ_G0028741.1 mouse_genomes_project 4 124796172 125157622 - MGP_129S1SvImJ_P0067655 Macf1 protein_coding protein_coding MGP_129S1SvImJ_T0067656.1 MGP_129S1SvImJ_G0028741.1 mouse_genomes_project 4 124796174 124984759 - MGP_129S1SvImJ_P0067656 Macf1 protein_coding protein_coding MGP_129S1SvImJ_T0067657.1 MGP_129S1SvImJ_G0028741.1 mouse_genomes_project 4 124796174 125157622 - MGP_129S1SvImJ_P0067657 Macf1 protein_coding protein_coding MGP_129S1SvImJ_T0067658.1 MGP_129S1SvImJ_G0028741.1 mouse_genomes_project 4 124796176 125157622 - MGP_129S1SvImJ_P0067658 Macf1 protein_coding protein_coding MGP_129S1SvImJ_T0067659.1 MGP_129S1SvImJ_G0028741.1 mouse_genomes_project 4 124829317 124836907 - MGP_129S1SvImJ_P0067659 Macf1 protein_coding protein_coding MGP_129S1SvImJ_T0067660.1 MGP_129S1SvImJ_G0028741.1 mouse_genomes_project 4 124843618 124854467 - Macf1 protein_coding processed_transcript MGP_129S1SvImJ_T0067661.1 MGP_129S1SvImJ_G0028741.1 mouse_genomes_project 4 124907511 125134291 - MGP_129S1SvImJ_P0067661 Macf1 protein_coding protein_coding MGP_129S1SvImJ_T0067662.1 MGP_129S1SvImJ_G0028741.1 mouse_genomes_project 4 124907511 124984898 - MGP_129S1SvImJ_P0067662 Macf1 protein_coding protein_coding MGP_129S1SvImJ_T0067663.1 MGP_129S1SvImJ_G0028741.1 mouse_genomes_project 4 124998328 125024998 - Macf1 protein_coding processed_transcript MGP_129S1SvImJ_T0067525.1 MGP_129S1SvImJ_G0028704.1 mouse_genomes_project 4 120857412 120859501 - MGP_129S1SvImJ_P0067525 Guca2b protein_coding protein_coding MGP_129S1SvImJ_T0067526.1 MGP_129S1SvImJ_G0028704.1 mouse_genomes_project 4 120857412 120859674 - MGP_129S1SvImJ_P0067526 Guca2b protein_coding protein_coding MGP_129S1SvImJ_T0067786.1 MGP_129S1SvImJ_G0028775.1 mouse_genomes_project 4 127901171 127909116 - MGP_129S1SvImJ_P0067786 Map7d1 protein_coding protein_coding MGP_129S1SvImJ_T0067787.1 MGP_129S1SvImJ_G0028775.1 mouse_genomes_project 4 127901171 127926885 - MGP_129S1SvImJ_P0067787 Map7d1 protein_coding protein_coding MGP_129S1SvImJ_T0067788.1 MGP_129S1SvImJ_G0028775.1 mouse_genomes_project 4 127901171 127926891 - MGP_129S1SvImJ_P0067788 Map7d1 protein_coding protein_coding MGP_129S1SvImJ_T0067789.1 MGP_129S1SvImJ_G0028775.1 mouse_genomes_project 4 127901171 127926951 - MGP_129S1SvImJ_P0067789 Map7d1 protein_coding protein_coding MGP_129S1SvImJ_T0067790.1 MGP_129S1SvImJ_G0028775.1 mouse_genomes_project 4 127901967 127902553 - Map7d1 protein_coding retained_intron MGP_129S1SvImJ_T0067791.1 MGP_129S1SvImJ_G0028775.1 mouse_genomes_project 4 127902624 127903781 - Map7d1 protein_coding retained_intron MGP_129S1SvImJ_T0101089.1 MGP_129S1SvImJ_G0039156.1 mouse_genomes_project 4 3151079 3151211 - Gm22473 snoRNA snoRNA MGP_129S1SvImJ_T0014486.1 MGP_129S1SvImJ_G0012575.1 mouse_genomes_project 4 25321956 25322979 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099871.1 MGP_129S1SvImJ_G0037938.1 mouse_genomes_project 4 127859741 127859838 - Gm25323 snRNA snRNA MGP_129S1SvImJ_T0014707.1 MGP_129S1SvImJ_G0012796.1 mouse_genomes_project 4 102391270 102394050 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098714.1 MGP_129S1SvImJ_G0036799.1 mouse_genomes_project 4 50386198 50386631 + Gm24943 ribozyme ribozyme MGP_129S1SvImJ_T0014844.1 MGP_129S1SvImJ_G0012933.1 mouse_genomes_project 4 151719721 151720499 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067687.1 MGP_129S1SvImJ_G0028752.1 mouse_genomes_project 4 126261381 126278882 + MGP_129S1SvImJ_P0067687 Sf3a3 protein_coding protein_coding MGP_129S1SvImJ_T0067688.1 MGP_129S1SvImJ_G0028752.1 mouse_genomes_project 4 126261488 126265329 + Sf3a3 protein_coding processed_transcript MGP_129S1SvImJ_T0067689.1 MGP_129S1SvImJ_G0028752.1 mouse_genomes_project 4 126268334 126269984 + Sf3a3 protein_coding processed_transcript MGP_129S1SvImJ_T0014702.1 MGP_129S1SvImJ_G0012791.1 mouse_genomes_project 4 101666087 101666801 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098362.1 MGP_129S1SvImJ_G0036447.1 mouse_genomes_project 4 58454526 58454998 + pseudogene pseudogene MGP_129S1SvImJ_T0014620.1 MGP_129S1SvImJ_G0012709.1 mouse_genomes_project 4 73290101 73290897 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004510.1 MGP_129S1SvImJ_G0003926.1 mouse_genomes_project 4 107178649 107181878 - 2700068H02Rik antisense antisense MGP_129S1SvImJ_T0014657.1 MGP_129S1SvImJ_G0012746.1 mouse_genomes_project 4 86593502 86594286 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066279.1 MGP_129S1SvImJ_G0028425.1 mouse_genomes_project 4 88471922 88472719 - MGP_129S1SvImJ_P0066279 Ifna12 protein_coding protein_coding MGP_129S1SvImJ_T0068433.1 MGP_129S1SvImJ_G0028909.1 mouse_genomes_project 4 136386653 136391831 + MGP_129S1SvImJ_P0068433 Zfp683 protein_coding protein_coding MGP_129S1SvImJ_T0067007.1 MGP_129S1SvImJ_G0028583.1 mouse_genomes_project 4 112863932 112883648 + MGP_129S1SvImJ_P0067007 Skint1 protein_coding protein_coding MGP_129S1SvImJ_T0067008.1 MGP_129S1SvImJ_G0028583.1 mouse_genomes_project 4 112863932 112887512 + MGP_129S1SvImJ_P0067008 Skint1 protein_coding protein_coding MGP_129S1SvImJ_T0067009.1 MGP_129S1SvImJ_G0028583.1 mouse_genomes_project 4 112863932 112883648 + MGP_129S1SvImJ_P0067009 Skint1 protein_coding protein_coding MGP_129S1SvImJ_T0067010.1 MGP_129S1SvImJ_G0028583.1 mouse_genomes_project 4 112863932 112877993 + MGP_129S1SvImJ_P0067010 Skint1 protein_coding protein_coding MGP_129S1SvImJ_T0067011.1 MGP_129S1SvImJ_G0028583.1 mouse_genomes_project 4 112863945 112870858 + Skint1 protein_coding retained_intron MGP_129S1SvImJ_T0014841.1 MGP_129S1SvImJ_G0012930.1 mouse_genomes_project 4 150092408 150092737 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066034.1 MGP_129S1SvImJ_G0028377.1 mouse_genomes_project 4 64456112 65507466 - MGP_129S1SvImJ_P0066034 Astn2 protein_coding protein_coding MGP_129S1SvImJ_T0066035.1 MGP_129S1SvImJ_G0028377.1 mouse_genomes_project 4 64456112 65507338 - MGP_129S1SvImJ_P0066035 Astn2 protein_coding protein_coding MGP_129S1SvImJ_T0011592.1 MGP_129S1SvImJ_G0009708.1 mouse_genomes_project 4 85651224 85651501 + Gm26069 misc_RNA misc_RNA MGP_129S1SvImJ_T0066203.1 MGP_129S1SvImJ_G0028408.1 mouse_genomes_project 4 84887947 85094241 + MGP_129S1SvImJ_P0066203 Sh3gl2 protein_coding protein_coding MGP_129S1SvImJ_T0066204.1 MGP_129S1SvImJ_G0028408.1 mouse_genomes_project 4 84888262 85084093 + MGP_129S1SvImJ_P0066204 Sh3gl2 protein_coding protein_coding MGP_129S1SvImJ_T0066205.1 MGP_129S1SvImJ_G0028408.1 mouse_genomes_project 4 84888290 85351298 + MGP_129S1SvImJ_P0066205 Sh3gl2 protein_coding protein_coding MGP_129S1SvImJ_T0066206.1 MGP_129S1SvImJ_G0028408.1 mouse_genomes_project 4 84888356 85070732 + MGP_129S1SvImJ_P0066206 Sh3gl2 protein_coding protein_coding MGP_129S1SvImJ_T0066207.1 MGP_129S1SvImJ_G0028408.1 mouse_genomes_project 4 85069381 85082296 + MGP_129S1SvImJ_P0066207 Sh3gl2 protein_coding protein_coding MGP_129S1SvImJ_T0010586.1 MGP_129S1SvImJ_G0008702.1 mouse_genomes_project 4 8643731 8643795 + Gm25002 miRNA miRNA MGP_129S1SvImJ_T0065826.1 MGP_129S1SvImJ_G0028318.1 mouse_genomes_project 4 56377203 56708275 + MGP_129S1SvImJ_P0065826 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065828.1 MGP_129S1SvImJ_G0028318.1 mouse_genomes_project 4 56377354 56667096 + MGP_129S1SvImJ_P0065828 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065829.1 MGP_129S1SvImJ_G0028318.1 mouse_genomes_project 4 56448223 56706022 + MGP_129S1SvImJ_P0065829 protein_coding protein_coding MGP_129S1SvImJ_T0065834.1 MGP_129S1SvImJ_G0028318.1 mouse_genomes_project 4 56658108 56708277 + MGP_129S1SvImJ_P0065834 protein_coding protein_coding MGP_129S1SvImJ_T0004463.1 MGP_129S1SvImJ_G0003891.1 mouse_genomes_project 4 41764640 41774741 - Gm12473 antisense antisense MGP_129S1SvImJ_T0068919.1 MGP_129S1SvImJ_G0029022.1 mouse_genomes_project 4 142502718 142522573 + MGP_129S1SvImJ_P0068919 Tas1r2 protein_coding protein_coding MGP_129S1SvImJ_T0068920.1 MGP_129S1SvImJ_G0029022.1 mouse_genomes_project 4 142502729 142522148 + MGP_129S1SvImJ_P0068920 Tas1r2 protein_coding protein_coding MGP_129S1SvImJ_T0067732.1 MGP_129S1SvImJ_G0028764.1 mouse_genomes_project 4 126670679 126702019 + MGP_129S1SvImJ_P0067732 Meaf6 protein_coding protein_coding MGP_129S1SvImJ_T0067733.1 MGP_129S1SvImJ_G0028764.1 mouse_genomes_project 4 126670696 126698684 + MGP_129S1SvImJ_P0067733 Meaf6 protein_coding protein_coding MGP_129S1SvImJ_T0067734.1 MGP_129S1SvImJ_G0028764.1 mouse_genomes_project 4 126670709 126698509 + MGP_129S1SvImJ_P0067734 Meaf6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067735.1 MGP_129S1SvImJ_G0028764.1 mouse_genomes_project 4 126670710 126675706 + Meaf6 protein_coding processed_transcript MGP_129S1SvImJ_T0067736.1 MGP_129S1SvImJ_G0028764.1 mouse_genomes_project 4 126670806 126698247 + MGP_129S1SvImJ_P0067736 Meaf6 protein_coding protein_coding MGP_129S1SvImJ_T0067737.1 MGP_129S1SvImJ_G0028764.1 mouse_genomes_project 4 126671733 126698252 + MGP_129S1SvImJ_P0067737 Meaf6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067738.1 MGP_129S1SvImJ_G0028764.1 mouse_genomes_project 4 126675443 126690931 + Meaf6 protein_coding processed_transcript MGP_129S1SvImJ_T0067739.1 MGP_129S1SvImJ_G0028764.1 mouse_genomes_project 4 126696778 126698223 + Meaf6 protein_coding retained_intron MGP_129S1SvImJ_T0014619.1 MGP_129S1SvImJ_G0012708.1 mouse_genomes_project 4 72715802 72716665 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010607.1 MGP_129S1SvImJ_G0008723.1 mouse_genomes_project 4 43063386 43063511 + Gm22639 miRNA miRNA MGP_129S1SvImJ_T0018072.1 MGP_129S1SvImJ_G0015540.1 mouse_genomes_project 4 32509896 32515254 - Platr9 processed_transcript processed_transcript MGP_129S1SvImJ_T0018073.1 MGP_129S1SvImJ_G0015540.1 mouse_genomes_project 4 32513561 32515254 - Platr9 processed_transcript processed_transcript MGP_129S1SvImJ_T0004605.1 MGP_129S1SvImJ_G0003999.1 mouse_genomes_project 4 152693461 152694276 - Gm15969 antisense antisense MGP_129S1SvImJ_T0007884.1 MGP_129S1SvImJ_G0006449.1 mouse_genomes_project 4 81308459 81312664 + Gm11412 lincRNA lincRNA MGP_129S1SvImJ_T0101145.1 MGP_129S1SvImJ_G0039212.1 mouse_genomes_project 4 118116558 118116628 - Gm22980 snoRNA snoRNA MGP_129S1SvImJ_T0065055.1 MGP_129S1SvImJ_G0028142.1 mouse_genomes_project 4 38112637 38122887 - MGP_129S1SvImJ_P0065055 Topors protein_coding protein_coding MGP_129S1SvImJ_T0004486.1 MGP_129S1SvImJ_G0003912.1 mouse_genomes_project 4 82262590 82263497 + Gm11269 antisense antisense MGP_129S1SvImJ_T0066827.1 MGP_129S1SvImJ_G0028550.1 mouse_genomes_project 4 108900677 108938706 - MGP_129S1SvImJ_P0066827 Zyg11a protein_coding protein_coding MGP_129S1SvImJ_T0066828.1 MGP_129S1SvImJ_G0028550.1 mouse_genomes_project 4 108900677 108938681 - MGP_129S1SvImJ_P0066828 Zyg11a protein_coding protein_coding MGP_129S1SvImJ_T0069063.1 MGP_129S1SvImJ_G0029056.1 mouse_genomes_project 4 144837576 144863292 + MGP_129S1SvImJ_P0069063 Agmat protein_coding unknown_likely_coding MGP_129S1SvImJ_T0069064.1 MGP_129S1SvImJ_G0029056.1 mouse_genomes_project 4 144843990 144863284 + MGP_129S1SvImJ_P0069064 Agmat protein_coding protein_coding MGP_129S1SvImJ_T0101126.1 MGP_129S1SvImJ_G0039193.1 mouse_genomes_project 4 72126560 72126693 - Gm25653 snoRNA snoRNA MGP_129S1SvImJ_T0069632.1 MGP_129S1SvImJ_G0029191.1 mouse_genomes_project 4 158300542 158343887 - MGP_129S1SvImJ_P0069632 Trp73 protein_coding protein_coding MGP_129S1SvImJ_T0069633.1 MGP_129S1SvImJ_G0029191.1 mouse_genomes_project 4 158302801 158343887 - MGP_129S1SvImJ_P0069633 Trp73 protein_coding protein_coding MGP_129S1SvImJ_T0069634.1 MGP_129S1SvImJ_G0029191.1 mouse_genomes_project 4 158303278 158343881 - MGP_129S1SvImJ_P0069634 Trp73 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069635.1 MGP_129S1SvImJ_G0029191.1 mouse_genomes_project 4 158303280 158351612 - MGP_129S1SvImJ_P0069635 Trp73 protein_coding protein_coding MGP_129S1SvImJ_T0069636.1 MGP_129S1SvImJ_G0029191.1 mouse_genomes_project 4 158308728 158332037 - MGP_129S1SvImJ_P0069636 Trp73 protein_coding protein_coding MGP_129S1SvImJ_T0069637.1 MGP_129S1SvImJ_G0029191.1 mouse_genomes_project 4 158311976 158365529 - MGP_129S1SvImJ_P0069637 Trp73 protein_coding protein_coding MGP_129S1SvImJ_T0065836.1 MGP_129S1SvImJ_G0028321.1 mouse_genomes_project 4 56755408 56768407 - MGP_129S1SvImJ_P0065836 Txn1 protein_coding protein_coding MGP_129S1SvImJ_T0068860.1 MGP_129S1SvImJ_G0029008.1 mouse_genomes_project 4 141772972 141774221 + MGP_129S1SvImJ_P0068860 Rnf186 protein_coding protein_coding MGP_129S1SvImJ_T0067712.1 MGP_129S1SvImJ_G0028758.1 mouse_genomes_project 4 126444518 126450426 + MGP_129S1SvImJ_P0067712 protein_coding protein_coding MGP_129S1SvImJ_T0067713.1 MGP_129S1SvImJ_G0028758.1 mouse_genomes_project 4 126449344 126485944 + MGP_129S1SvImJ_P0067713 protein_coding protein_coding MGP_129S1SvImJ_T0067714.1 MGP_129S1SvImJ_G0028758.1 mouse_genomes_project 4 126463754 126468184 + protein_coding processed_transcript MGP_129S1SvImJ_T0014517.1 MGP_129S1SvImJ_G0012606.1 mouse_genomes_project 4 33028703 33029137 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014577.1 MGP_129S1SvImJ_G0012666.1 mouse_genomes_project 4 53814357 53814718 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067557.1 MGP_129S1SvImJ_G0028712.1 mouse_genomes_project 4 121939770 121941019 + MGP_129S1SvImJ_P0067557 Cited4 protein_coding protein_coding MGP_129S1SvImJ_T0066518.1 MGP_129S1SvImJ_G0028493.1 mouse_genomes_project 4 101807141 101921964 + MGP_129S1SvImJ_P0066518 Dnajc6 protein_coding protein_coding MGP_129S1SvImJ_T0066519.1 MGP_129S1SvImJ_G0028493.1 mouse_genomes_project 4 101818318 101959937 + MGP_129S1SvImJ_P0066519 Dnajc6 protein_coding protein_coding MGP_129S1SvImJ_T0066520.1 MGP_129S1SvImJ_G0028493.1 mouse_genomes_project 4 101818423 101928487 + MGP_129S1SvImJ_P0066520 Dnajc6 protein_coding protein_coding MGP_129S1SvImJ_T0066521.1 MGP_129S1SvImJ_G0028493.1 mouse_genomes_project 4 101818477 101914465 + Dnajc6 protein_coding processed_transcript MGP_129S1SvImJ_T0066522.1 MGP_129S1SvImJ_G0028493.1 mouse_genomes_project 4 101865621 101959945 + MGP_129S1SvImJ_P0066522 Dnajc6 protein_coding protein_coding MGP_129S1SvImJ_T0018078.1 MGP_129S1SvImJ_G0015543.1 mouse_genomes_project 4 42239497 42260683 + Gm12503 processed_transcript processed_transcript MGP_129S1SvImJ_T0068924.1 MGP_129S1SvImJ_G0029025.1 mouse_genomes_project 4 142917781 143157345 - MGP_129S1SvImJ_P0068924 Igsf21 protein_coding protein_coding MGP_129S1SvImJ_T0067407.1 MGP_129S1SvImJ_G0028670.1 mouse_genomes_project 4 119534691 119553989 - MGP_129S1SvImJ_P0067407 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0067408.1 MGP_129S1SvImJ_G0028670.1 mouse_genomes_project 4 119534700 119553269 - MGP_129S1SvImJ_P0067408 protein_coding protein_coding MGP_129S1SvImJ_T0067409.1 MGP_129S1SvImJ_G0028670.1 mouse_genomes_project 4 119541551 119553307 - protein_coding processed_transcript MGP_129S1SvImJ_T0101085.1 MGP_129S1SvImJ_G0039152.1 mouse_genomes_project 4 325051 325119 - Gm24016 snoRNA snoRNA MGP_129S1SvImJ_T0014572.1 MGP_129S1SvImJ_G0012661.1 mouse_genomes_project 4 52442126 52442513 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102526.1 MGP_129S1SvImJ_G0040359.1 mouse_genomes_project 4 96253338 96253544 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0014481.1 MGP_129S1SvImJ_G0012570.1 mouse_genomes_project 4 23737865 23738543 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068542.1 MGP_129S1SvImJ_G0028934.1 mouse_genomes_project 4 137177662 137186105 - Tmem57 protein_coding processed_transcript MGP_129S1SvImJ_T0068543.1 MGP_129S1SvImJ_G0028934.1 mouse_genomes_project 4 137177662 137232808 - MGP_129S1SvImJ_P0068543 Tmem57 protein_coding protein_coding MGP_129S1SvImJ_T0068544.1 MGP_129S1SvImJ_G0028934.1 mouse_genomes_project 4 137186085 137232612 - MGP_129S1SvImJ_P0068544 Tmem57 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068545.1 MGP_129S1SvImJ_G0028934.1 mouse_genomes_project 4 137204682 137232726 - MGP_129S1SvImJ_P0068545 Tmem57 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068546.1 MGP_129S1SvImJ_G0028934.1 mouse_genomes_project 4 137214829 137232780 - Tmem57 protein_coding retained_intron MGP_129S1SvImJ_T0014802.1 MGP_129S1SvImJ_G0012891.1 mouse_genomes_project 4 134354795 134355187 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010674.1 MGP_129S1SvImJ_G0008790.1 mouse_genomes_project 4 160152601 160152727 + Gm27743 miRNA miRNA MGP_129S1SvImJ_T0069121.1 MGP_129S1SvImJ_G0029077.1 mouse_genomes_project 4 147132501 147146844 + MGP_129S1SvImJ_P0069121 Gm13103 protein_coding protein_coding MGP_129S1SvImJ_T0069122.1 MGP_129S1SvImJ_G0029077.1 mouse_genomes_project 4 147132511 147145619 + MGP_129S1SvImJ_P0069122 Gm13103 protein_coding protein_coding MGP_129S1SvImJ_T0068673.1 MGP_129S1SvImJ_G0028962.1 mouse_genomes_project 4 138737472 138777620 + MGP_129S1SvImJ_P0068673 Asap3 protein_coding protein_coding MGP_129S1SvImJ_T0064896.1 MGP_129S1SvImJ_G0028105.1 mouse_genomes_project 4 23447360 23469503 - MGP_129S1SvImJ_P0064896 Manea protein_coding protein_coding MGP_129S1SvImJ_T0064897.1 MGP_129S1SvImJ_G0028105.1 mouse_genomes_project 4 23450903 23463506 - Manea protein_coding processed_transcript MGP_129S1SvImJ_T0064898.1 MGP_129S1SvImJ_G0028105.1 mouse_genomes_project 4 23463070 23469466 - Manea protein_coding processed_transcript MGP_129S1SvImJ_T0064899.1 MGP_129S1SvImJ_G0028105.1 mouse_genomes_project 4 23463361 23469503 - MGP_129S1SvImJ_P0064899 Manea protein_coding protein_coding MGP_129S1SvImJ_T0067873.1 MGP_129S1SvImJ_G0028793.1 mouse_genomes_project 4 128857930 128863850 + MGP_129S1SvImJ_P0067873 Tmem35b protein_coding protein_coding MGP_129S1SvImJ_T0067874.1 MGP_129S1SvImJ_G0028793.1 mouse_genomes_project 4 128860268 128863850 + MGP_129S1SvImJ_P0067874 Tmem35b protein_coding protein_coding MGP_129S1SvImJ_T0014849.1 MGP_129S1SvImJ_G0012938.1 mouse_genomes_project 4 152960959 152961851 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004565.1 MGP_129S1SvImJ_G0003968.1 mouse_genomes_project 4 134698080 134698995 + Gm12999 antisense antisense MGP_129S1SvImJ_T0067943.1 MGP_129S1SvImJ_G0028813.1 mouse_genomes_project 4 130968993 130979486 - MGP_129S1SvImJ_P0067943 Hpca protein_coding protein_coding MGP_129S1SvImJ_T0067944.1 MGP_129S1SvImJ_G0028813.1 mouse_genomes_project 4 130968993 130976418 - MGP_129S1SvImJ_P0067944 Hpca protein_coding protein_coding MGP_129S1SvImJ_T0067945.1 MGP_129S1SvImJ_G0028813.1 mouse_genomes_project 4 130969000 130979190 - MGP_129S1SvImJ_P0067945 Hpca protein_coding protein_coding MGP_129S1SvImJ_T0067946.1 MGP_129S1SvImJ_G0028813.1 mouse_genomes_project 4 130969000 130978741 - MGP_129S1SvImJ_P0067946 Hpca protein_coding protein_coding MGP_129S1SvImJ_T0067947.1 MGP_129S1SvImJ_G0028813.1 mouse_genomes_project 4 130969676 130978397 - MGP_129S1SvImJ_P0067947 Hpca protein_coding protein_coding MGP_129S1SvImJ_T0067948.1 MGP_129S1SvImJ_G0028813.1 mouse_genomes_project 4 130969690 130979339 - MGP_129S1SvImJ_P0067948 Hpca protein_coding protein_coding MGP_129S1SvImJ_T0067949.1 MGP_129S1SvImJ_G0028813.1 mouse_genomes_project 4 130969865 130979375 - MGP_129S1SvImJ_P0067949 Hpca protein_coding protein_coding MGP_129S1SvImJ_T0067950.1 MGP_129S1SvImJ_G0028813.1 mouse_genomes_project 4 130970091 130979189 - MGP_129S1SvImJ_P0067950 Hpca protein_coding protein_coding MGP_129S1SvImJ_T0067951.1 MGP_129S1SvImJ_G0028813.1 mouse_genomes_project 4 130976055 130979158 - MGP_129S1SvImJ_P0067951 Hpca protein_coding protein_coding MGP_129S1SvImJ_T0014682.1 MGP_129S1SvImJ_G0012771.1 mouse_genomes_project 4 95090102 95090547 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068977.1 MGP_129S1SvImJ_G0029037.1 mouse_genomes_project 4 144073241 144088369 - Necap2 protein_coding processed_transcript MGP_129S1SvImJ_T0068978.1 MGP_129S1SvImJ_G0029037.1 mouse_genomes_project 4 144073241 144088384 - MGP_129S1SvImJ_P0068978 Necap2 protein_coding protein_coding MGP_129S1SvImJ_T0068979.1 MGP_129S1SvImJ_G0029037.1 mouse_genomes_project 4 144074080 144085073 - Necap2 protein_coding retained_intron MGP_129S1SvImJ_T0068980.1 MGP_129S1SvImJ_G0029037.1 mouse_genomes_project 4 144074128 144075573 - Necap2 protein_coding retained_intron MGP_129S1SvImJ_T0068981.1 MGP_129S1SvImJ_G0029037.1 mouse_genomes_project 4 144074247 144078579 - Necap2 protein_coding retained_intron MGP_129S1SvImJ_T0068982.1 MGP_129S1SvImJ_G0029037.1 mouse_genomes_project 4 144074294 144080445 - MGP_129S1SvImJ_P0068982 Necap2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068983.1 MGP_129S1SvImJ_G0029037.1 mouse_genomes_project 4 144074939 144088384 - Necap2 protein_coding processed_transcript MGP_129S1SvImJ_T0068984.1 MGP_129S1SvImJ_G0029037.1 mouse_genomes_project 4 144076822 144088384 - Necap2 protein_coding processed_transcript MGP_129S1SvImJ_T0068985.1 MGP_129S1SvImJ_G0029037.1 mouse_genomes_project 4 144076892 144078513 - Necap2 protein_coding retained_intron MGP_129S1SvImJ_T0068986.1 MGP_129S1SvImJ_G0029037.1 mouse_genomes_project 4 144076920 144088321 - Necap2 protein_coding retained_intron MGP_129S1SvImJ_T0068987.1 MGP_129S1SvImJ_G0029037.1 mouse_genomes_project 4 144079068 144088384 - Necap2 protein_coding retained_intron MGP_129S1SvImJ_T0010635.1 MGP_129S1SvImJ_G0008751.1 mouse_genomes_project 4 122054468 122054560 + Mir30f miRNA miRNA MGP_129S1SvImJ_T0014640.1 MGP_129S1SvImJ_G0012729.1 mouse_genomes_project 4 79515870 79519108 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018092.1 MGP_129S1SvImJ_G0015553.1 mouse_genomes_project 4 85210035 85515979 + processed_transcript processed_transcript MGP_129S1SvImJ_T0067035.1 MGP_129S1SvImJ_G0028594.1 mouse_genomes_project 4 115825397 115840634 + MGP_129S1SvImJ_P0067035 Tal1 protein_coding protein_coding MGP_129S1SvImJ_T0067036.1 MGP_129S1SvImJ_G0028594.1 mouse_genomes_project 4 115826409 115832536 + MGP_129S1SvImJ_P0067036 Tal1 protein_coding protein_coding MGP_129S1SvImJ_T0067037.1 MGP_129S1SvImJ_G0028594.1 mouse_genomes_project 4 115826782 115840106 + MGP_129S1SvImJ_P0067037 Tal1 protein_coding protein_coding MGP_129S1SvImJ_T0067038.1 MGP_129S1SvImJ_G0028594.1 mouse_genomes_project 4 115828479 115839350 + MGP_129S1SvImJ_P0067038 Tal1 protein_coding protein_coding MGP_129S1SvImJ_T0066594.1 MGP_129S1SvImJ_G0028506.1 mouse_genomes_project 4 103584993 103630177 - MGP_129S1SvImJ_P0066594 Slc35d1 protein_coding protein_coding MGP_129S1SvImJ_T0066595.1 MGP_129S1SvImJ_G0028506.1 mouse_genomes_project 4 103585000 103629816 - MGP_129S1SvImJ_P0066595 Slc35d1 protein_coding protein_coding MGP_129S1SvImJ_T0066596.1 MGP_129S1SvImJ_G0028506.1 mouse_genomes_project 4 103615503 103629816 - MGP_129S1SvImJ_P0066596 Slc35d1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066597.1 MGP_129S1SvImJ_G0028506.1 mouse_genomes_project 4 103625344 103629812 - Slc35d1 protein_coding retained_intron MGP_129S1SvImJ_T0066598.1 MGP_129S1SvImJ_G0028506.1 mouse_genomes_project 4 103625565 103629685 - Slc35d1 protein_coding retained_intron MGP_129S1SvImJ_T0007948.1 MGP_129S1SvImJ_G0006500.1 mouse_genomes_project 4 125384379 125390594 - Gm26606 lincRNA lincRNA MGP_129S1SvImJ_T0099880.1 MGP_129S1SvImJ_G0037947.1 mouse_genomes_project 4 136186383 136186483 - Gm22523 snRNA snRNA MGP_129S1SvImJ_T0065892.1 MGP_129S1SvImJ_G0028336.1 mouse_genomes_project 4 58375336 58454528 - MGP_129S1SvImJ_P0065892 Ptbp3 protein_coding protein_coding MGP_129S1SvImJ_T0065893.1 MGP_129S1SvImJ_G0028336.1 mouse_genomes_project 4 58378724 58454657 - MGP_129S1SvImJ_P0065893 Ptbp3 protein_coding protein_coding MGP_129S1SvImJ_T0065894.1 MGP_129S1SvImJ_G0028336.1 mouse_genomes_project 4 58380400 58389963 - Ptbp3 protein_coding retained_intron MGP_129S1SvImJ_T0065895.1 MGP_129S1SvImJ_G0028336.1 mouse_genomes_project 4 58385634 58397459 - MGP_129S1SvImJ_P0065895 Ptbp3 protein_coding protein_coding MGP_129S1SvImJ_T0065896.1 MGP_129S1SvImJ_G0028336.1 mouse_genomes_project 4 58385639 58454625 - MGP_129S1SvImJ_P0065896 Ptbp3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065897.1 MGP_129S1SvImJ_G0028336.1 mouse_genomes_project 4 58397362 58454630 - MGP_129S1SvImJ_P0065897 Ptbp3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065898.1 MGP_129S1SvImJ_G0028336.1 mouse_genomes_project 4 58397412 58454638 - MGP_129S1SvImJ_P0065898 Ptbp3 protein_coding protein_coding MGP_129S1SvImJ_T0065899.1 MGP_129S1SvImJ_G0028336.1 mouse_genomes_project 4 58405865 58418842 - Ptbp3 protein_coding retained_intron MGP_129S1SvImJ_T0065900.1 MGP_129S1SvImJ_G0028336.1 mouse_genomes_project 4 58421650 58454110 - MGP_129S1SvImJ_P0065900 Ptbp3 protein_coding protein_coding MGP_129S1SvImJ_T0065218.1 MGP_129S1SvImJ_G0028190.1 mouse_genomes_project 4 40781117 40903463 + MGP_129S1SvImJ_P0065218 4930578G10Rik protein_coding protein_coding MGP_129S1SvImJ_T0065219.1 MGP_129S1SvImJ_G0028190.1 mouse_genomes_project 4 40781571 40903715 + MGP_129S1SvImJ_P0065219 4930578G10Rik protein_coding protein_coding MGP_129S1SvImJ_T0067433.1 MGP_129S1SvImJ_G0028683.1 mouse_genomes_project 4 120046632 120050236 - MGP_129S1SvImJ_P0067433 Olfr1329 protein_coding protein_coding MGP_129S1SvImJ_T0014633.1 MGP_129S1SvImJ_G0012722.1 mouse_genomes_project 4 76132502 76132896 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098360.1 MGP_129S1SvImJ_G0036445.1 mouse_genomes_project 4 2961729 2964600 - pseudogene pseudogene MGP_129S1SvImJ_T0068472.1 MGP_129S1SvImJ_G0028916.1 mouse_genomes_project 4 136543972 136564646 - MGP_129S1SvImJ_P0068472 Catsper4 protein_coding protein_coding MGP_129S1SvImJ_T0068473.1 MGP_129S1SvImJ_G0028916.1 mouse_genomes_project 4 136543972 136564646 - MGP_129S1SvImJ_P0068473 Catsper4 protein_coding protein_coding MGP_129S1SvImJ_T0068474.1 MGP_129S1SvImJ_G0028916.1 mouse_genomes_project 4 136561868 136564635 - MGP_129S1SvImJ_P0068474 Catsper4 protein_coding protein_coding MGP_129S1SvImJ_T0068475.1 MGP_129S1SvImJ_G0028916.1 mouse_genomes_project 4 136563760 136564613 - Catsper4 protein_coding processed_transcript MGP_129S1SvImJ_T0014722.1 MGP_129S1SvImJ_G0012811.1 mouse_genomes_project 4 108450197 108450638 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068483.1 MGP_129S1SvImJ_G0028919.1 mouse_genomes_project 4 136580878 136582290 + MGP_129S1SvImJ_P0068483 E130218I03Rik protein_coding protein_coding MGP_129S1SvImJ_T0068484.1 MGP_129S1SvImJ_G0028919.1 mouse_genomes_project 4 136580979 136583090 + MGP_129S1SvImJ_P0068484 E130218I03Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068485.1 MGP_129S1SvImJ_G0028919.1 mouse_genomes_project 4 136580979 136583086 + MGP_129S1SvImJ_P0068485 E130218I03Rik protein_coding protein_coding MGP_129S1SvImJ_T0068486.1 MGP_129S1SvImJ_G0028919.1 mouse_genomes_project 4 136580992 136582206 + MGP_129S1SvImJ_P0068486 E130218I03Rik protein_coding protein_coding MGP_129S1SvImJ_T0068487.1 MGP_129S1SvImJ_G0028919.1 mouse_genomes_project 4 136580992 136582529 + MGP_129S1SvImJ_P0068487 E130218I03Rik protein_coding protein_coding MGP_129S1SvImJ_T0068488.1 MGP_129S1SvImJ_G0028919.1 mouse_genomes_project 4 136580993 136582769 + MGP_129S1SvImJ_P0068488 E130218I03Rik protein_coding protein_coding MGP_129S1SvImJ_T0068489.1 MGP_129S1SvImJ_G0028919.1 mouse_genomes_project 4 136580994 136582736 + MGP_129S1SvImJ_P0068489 E130218I03Rik protein_coding protein_coding MGP_129S1SvImJ_T0068490.1 MGP_129S1SvImJ_G0028919.1 mouse_genomes_project 4 136581199 136582494 + E130218I03Rik protein_coding processed_transcript MGP_129S1SvImJ_T0014694.1 MGP_129S1SvImJ_G0012783.1 mouse_genomes_project 4 99674041 99675040 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014698.1 MGP_129S1SvImJ_G0012787.1 mouse_genomes_project 4 100839244 100840182 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099863.1 MGP_129S1SvImJ_G0037930.1 mouse_genomes_project 4 118156465 118156581 + Gm25099 snRNA snRNA MGP_129S1SvImJ_T0101140.1 MGP_129S1SvImJ_G0039207.1 mouse_genomes_project 4 103136815 103136943 + Gm24869 snoRNA snoRNA MGP_129S1SvImJ_T0014542.1 MGP_129S1SvImJ_G0012631.1 mouse_genomes_project 4 43569227 43569517 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007853.1 MGP_129S1SvImJ_G0006424.1 mouse_genomes_project 4 51883725 51892602 - AI427809 lincRNA lincRNA MGP_129S1SvImJ_T0007854.1 MGP_129S1SvImJ_G0006424.1 mouse_genomes_project 4 51884262 51884917 - AI427809 lincRNA lincRNA MGP_129S1SvImJ_T0007855.1 MGP_129S1SvImJ_G0006424.1 mouse_genomes_project 4 51884824 51887862 - AI427809 lincRNA lincRNA MGP_129S1SvImJ_T0007856.1 MGP_129S1SvImJ_G0006424.1 mouse_genomes_project 4 51885101 51886201 - AI427809 lincRNA lincRNA MGP_129S1SvImJ_T0007826.1 MGP_129S1SvImJ_G0006398.1 mouse_genomes_project 4 21057172 21057635 - Gm28448 lincRNA lincRNA MGP_129S1SvImJ_T0004551.1 MGP_129S1SvImJ_G0003957.1 mouse_genomes_project 4 126526708 126563733 - Gm12930 antisense antisense MGP_129S1SvImJ_T0068825.1 MGP_129S1SvImJ_G0028996.1 mouse_genomes_project 4 141128792 141131229 - MGP_129S1SvImJ_P0068825 Fam43b protein_coding protein_coding MGP_129S1SvImJ_T0068024.1 MGP_129S1SvImJ_G0028830.1 mouse_genomes_project 4 131530218 131538810 - MGP_129S1SvImJ_P0068024 Eif3i protein_coding protein_coding MGP_129S1SvImJ_T0068025.1 MGP_129S1SvImJ_G0028830.1 mouse_genomes_project 4 131531589 131534003 - Eif3i protein_coding retained_intron MGP_129S1SvImJ_T0068026.1 MGP_129S1SvImJ_G0028830.1 mouse_genomes_project 4 131531786 131538761 - MGP_129S1SvImJ_P0068026 Eif3i protein_coding protein_coding MGP_129S1SvImJ_T0068027.1 MGP_129S1SvImJ_G0028830.1 mouse_genomes_project 4 131533361 131538761 - Eif3i protein_coding processed_transcript MGP_129S1SvImJ_T0068028.1 MGP_129S1SvImJ_G0028830.1 mouse_genomes_project 4 131536368 131538778 - Eif3i protein_coding retained_intron MGP_129S1SvImJ_T0068243.1 MGP_129S1SvImJ_G0028868.1 mouse_genomes_project 4 134451602 134472230 - MGP_129S1SvImJ_P0068243 Trnau1ap protein_coding protein_coding MGP_129S1SvImJ_T0068244.1 MGP_129S1SvImJ_G0028868.1 mouse_genomes_project 4 134451602 134472279 - MGP_129S1SvImJ_P0068244 Trnau1ap protein_coding protein_coding MGP_129S1SvImJ_T0068245.1 MGP_129S1SvImJ_G0028868.1 mouse_genomes_project 4 134451604 134472257 - Trnau1ap protein_coding retained_intron MGP_129S1SvImJ_T0068246.1 MGP_129S1SvImJ_G0028868.1 mouse_genomes_project 4 134451688 134472235 - Trnau1ap protein_coding processed_transcript MGP_129S1SvImJ_T0068247.1 MGP_129S1SvImJ_G0028868.1 mouse_genomes_project 4 134451704 134472130 - MGP_129S1SvImJ_P0068247 Trnau1ap protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068248.1 MGP_129S1SvImJ_G0028868.1 mouse_genomes_project 4 134454042 134472155 - MGP_129S1SvImJ_P0068248 Trnau1ap protein_coding protein_coding MGP_129S1SvImJ_T0068249.1 MGP_129S1SvImJ_G0028868.1 mouse_genomes_project 4 134454148 134472245 - MGP_129S1SvImJ_P0068249 Trnau1ap protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068250.1 MGP_129S1SvImJ_G0028868.1 mouse_genomes_project 4 134454185 134472223 - Trnau1ap protein_coding processed_transcript MGP_129S1SvImJ_T0068251.1 MGP_129S1SvImJ_G0028868.1 mouse_genomes_project 4 134454188 134472279 - MGP_129S1SvImJ_P0068251 Trnau1ap protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068252.1 MGP_129S1SvImJ_G0028868.1 mouse_genomes_project 4 134460810 134468012 - Trnau1ap protein_coding retained_intron MGP_129S1SvImJ_T0068253.1 MGP_129S1SvImJ_G0028868.1 mouse_genomes_project 4 134461288 134472279 - MGP_129S1SvImJ_P0068253 Trnau1ap protein_coding protein_coding MGP_129S1SvImJ_T0068254.1 MGP_129S1SvImJ_G0028868.1 mouse_genomes_project 4 134470849 134472256 - Trnau1ap protein_coding retained_intron MGP_129S1SvImJ_T0066857.1 MGP_129S1SvImJ_G0028558.1 mouse_genomes_project 4 109371474 109385660 + MGP_129S1SvImJ_P0066857 Cc2d1b protein_coding protein_coding MGP_129S1SvImJ_T0066858.1 MGP_129S1SvImJ_G0028558.1 mouse_genomes_project 4 109375046 109377541 + MGP_129S1SvImJ_P0066858 Cc2d1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066859.1 MGP_129S1SvImJ_G0028558.1 mouse_genomes_project 4 109375097 109385660 + MGP_129S1SvImJ_P0066859 Cc2d1b protein_coding protein_coding MGP_129S1SvImJ_T0066860.1 MGP_129S1SvImJ_G0028558.1 mouse_genomes_project 4 109377289 109378297 + Cc2d1b protein_coding retained_intron MGP_129S1SvImJ_T0066861.1 MGP_129S1SvImJ_G0028558.1 mouse_genomes_project 4 109377554 109378638 + Cc2d1b protein_coding retained_intron MGP_129S1SvImJ_T0066862.1 MGP_129S1SvImJ_G0028558.1 mouse_genomes_project 4 109377582 109385642 + Cc2d1b protein_coding retained_intron MGP_129S1SvImJ_T0066863.1 MGP_129S1SvImJ_G0028558.1 mouse_genomes_project 4 109381124 109381937 + Cc2d1b protein_coding retained_intron MGP_129S1SvImJ_T0066864.1 MGP_129S1SvImJ_G0028558.1 mouse_genomes_project 4 109381158 109381968 + Cc2d1b protein_coding processed_transcript MGP_129S1SvImJ_T0066865.1 MGP_129S1SvImJ_G0028558.1 mouse_genomes_project 4 109381984 109384800 + Cc2d1b protein_coding retained_intron MGP_129S1SvImJ_T0098585.1 MGP_129S1SvImJ_G0036670.1 mouse_genomes_project 4 9567592 9567699 + n-R5s182 rRNA rRNA MGP_129S1SvImJ_T0098361.1 MGP_129S1SvImJ_G0036446.1 mouse_genomes_project 4 34657165 34657503 - pseudogene pseudogene MGP_129S1SvImJ_T0101708.1 MGP_129S1SvImJ_G0039715.1 mouse_genomes_project 4 86612686 86626193 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0001424.1 MGP_129S1SvImJ_G0001347.1 mouse_genomes_project 4 2882378 2882653 + TEC TEC MGP_129S1SvImJ_T0064997.1 MGP_129S1SvImJ_G0028129.1 mouse_genomes_project 4 32248556 32273685 - MGP_129S1SvImJ_P0064997 Slc35a1 protein_coding protein_coding MGP_129S1SvImJ_T0064998.1 MGP_129S1SvImJ_G0028129.1 mouse_genomes_project 4 32249192 32269709 - Slc35a1 protein_coding processed_transcript MGP_129S1SvImJ_T0064999.1 MGP_129S1SvImJ_G0028129.1 mouse_genomes_project 4 32254797 32269616 - MGP_129S1SvImJ_P0064999 Slc35a1 protein_coding protein_coding MGP_129S1SvImJ_T0065000.1 MGP_129S1SvImJ_G0028129.1 mouse_genomes_project 4 32261233 32273502 - Slc35a1 protein_coding processed_transcript MGP_129S1SvImJ_T0065001.1 MGP_129S1SvImJ_G0028129.1 mouse_genomes_project 4 32269587 32273643 - Slc35a1 protein_coding processed_transcript MGP_129S1SvImJ_T0004601.1 MGP_129S1SvImJ_G0003996.1 mouse_genomes_project 4 151689602 151692466 - Gm13054 antisense antisense MGP_129S1SvImJ_T0014706.1 MGP_129S1SvImJ_G0012795.1 mouse_genomes_project 4 102391268 102394050 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068229.1 MGP_129S1SvImJ_G0028864.1 mouse_genomes_project 4 134318716 134347051 - MGP_129S1SvImJ_P0068229 protein_coding protein_coding MGP_129S1SvImJ_T0068230.1 MGP_129S1SvImJ_G0028864.1 mouse_genomes_project 4 134319189 134347065 - protein_coding retained_intron MGP_129S1SvImJ_T0099838.1 MGP_129S1SvImJ_G0037905.1 mouse_genomes_project 4 68308967 68309074 + Gm24697 snRNA snRNA MGP_129S1SvImJ_T0065266.1 MGP_129S1SvImJ_G0028199.1 mouse_genomes_project 4 41109915 41113935 - MGP_129S1SvImJ_P0065266 Stoml2 protein_coding protein_coding MGP_129S1SvImJ_T0065267.1 MGP_129S1SvImJ_G0028199.1 mouse_genomes_project 4 41110251 41112063 - Stoml2 protein_coding processed_transcript MGP_129S1SvImJ_T0065268.1 MGP_129S1SvImJ_G0028199.1 mouse_genomes_project 4 41110267 41112140 - Stoml2 protein_coding processed_transcript MGP_129S1SvImJ_T0065269.1 MGP_129S1SvImJ_G0028199.1 mouse_genomes_project 4 41110454 41113681 - MGP_129S1SvImJ_P0065269 Stoml2 protein_coding protein_coding MGP_129S1SvImJ_T0065270.1 MGP_129S1SvImJ_G0028199.1 mouse_genomes_project 4 41110466 41112819 - MGP_129S1SvImJ_P0065270 Stoml2 protein_coding protein_coding MGP_129S1SvImJ_T0065271.1 MGP_129S1SvImJ_G0028199.1 mouse_genomes_project 4 41111789 41113675 - Stoml2 protein_coding processed_transcript MGP_129S1SvImJ_T0065272.1 MGP_129S1SvImJ_G0028199.1 mouse_genomes_project 4 41111822 41113595 - MGP_129S1SvImJ_P0065272 Stoml2 protein_coding protein_coding MGP_129S1SvImJ_T0065273.1 MGP_129S1SvImJ_G0028199.1 mouse_genomes_project 4 41111840 41112725 - Stoml2 protein_coding processed_transcript MGP_129S1SvImJ_T0065274.1 MGP_129S1SvImJ_G0028199.1 mouse_genomes_project 4 41111998 41112826 - Stoml2 protein_coding processed_transcript MGP_129S1SvImJ_T0065275.1 MGP_129S1SvImJ_G0028199.1 mouse_genomes_project 4 41112266 41113583 - Stoml2 protein_coding processed_transcript MGP_129S1SvImJ_T0065276.1 MGP_129S1SvImJ_G0028199.1 mouse_genomes_project 4 41112718 41113661 - Stoml2 protein_coding processed_transcript MGP_129S1SvImJ_T0007941.1 MGP_129S1SvImJ_G0006493.1 mouse_genomes_project 4 116661559 116665358 + Gm12847 lincRNA lincRNA MGP_129S1SvImJ_T0064809.1 MGP_129S1SvImJ_G0028084.1 mouse_genomes_project 4 16822554 16844167 + MGP_129S1SvImJ_P0064809 Slc7a13 protein_coding protein_coding MGP_129S1SvImJ_T0014799.1 MGP_129S1SvImJ_G0012888.1 mouse_genomes_project 4 131437113 131438506 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067952.1 MGP_129S1SvImJ_G0028814.1 mouse_genomes_project 4 130994539 131003821 + MGP_129S1SvImJ_P0067952 Fndc5 protein_coding protein_coding MGP_129S1SvImJ_T0099824.1 MGP_129S1SvImJ_G0037891.1 mouse_genomes_project 4 39102345 39102448 - Gm24650 snRNA snRNA MGP_129S1SvImJ_T0010660.1 MGP_129S1SvImJ_G0008776.1 mouse_genomes_project 4 141044542 141044611 - Mir7019 miRNA miRNA MGP_129S1SvImJ_T0014554.1 MGP_129S1SvImJ_G0012643.1 mouse_genomes_project 4 47414795 47415133 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101110.1 MGP_129S1SvImJ_G0039177.1 mouse_genomes_project 4 47333970 47334095 + Gm23746 snoRNA snoRNA MGP_129S1SvImJ_T0014490.1 MGP_129S1SvImJ_G0012579.1 mouse_genomes_project 4 25885660 25886578 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065782.1 MGP_129S1SvImJ_G0028307.1 mouse_genomes_project 4 55499976 55501415 - MGP_129S1SvImJ_P0065782 Actl7b protein_coding protein_coding MGP_129S1SvImJ_T0067265.1 MGP_129S1SvImJ_G0028644.1 mouse_genomes_project 4 118085862 118087405 + MGP_129S1SvImJ_P0067265 Tctex1d4 protein_coding protein_coding MGP_129S1SvImJ_T0067266.1 MGP_129S1SvImJ_G0028644.1 mouse_genomes_project 4 118085881 118087807 + MGP_129S1SvImJ_P0067266 Tctex1d4 protein_coding protein_coding MGP_129S1SvImJ_T0067267.1 MGP_129S1SvImJ_G0028644.1 mouse_genomes_project 4 118086242 118087584 + MGP_129S1SvImJ_P0067267 Tctex1d4 protein_coding protein_coding MGP_129S1SvImJ_T0065887.1 MGP_129S1SvImJ_G0028335.1 mouse_genomes_project 4 58211738 58213022 - Susd1 protein_coding retained_intron MGP_129S1SvImJ_T0065888.1 MGP_129S1SvImJ_G0028335.1 mouse_genomes_project 4 58211738 58342086 - MGP_129S1SvImJ_P0065888 Susd1 protein_coding protein_coding MGP_129S1SvImJ_T0065889.1 MGP_129S1SvImJ_G0028335.1 mouse_genomes_project 4 58211809 58342086 - MGP_129S1SvImJ_P0065889 Susd1 protein_coding protein_coding MGP_129S1SvImJ_T0065890.1 MGP_129S1SvImJ_G0028335.1 mouse_genomes_project 4 58226261 58230023 - Susd1 protein_coding retained_intron MGP_129S1SvImJ_T0065891.1 MGP_129S1SvImJ_G0028335.1 mouse_genomes_project 4 58228957 58260378 - Susd1 protein_coding retained_intron MGP_129S1SvImJ_T0064773.1 MGP_129S1SvImJ_G0028068.1 mouse_genomes_project 4 11618223 11633194 - MGP_129S1SvImJ_P0064773 Otud6b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0066836.1 MGP_129S1SvImJ_G0028554.1 mouse_genomes_project 4 109133918 109142121 - MGP_129S1SvImJ_P0066836 Gpx7 protein_coding protein_coding MGP_129S1SvImJ_T0066837.1 MGP_129S1SvImJ_G0028554.1 mouse_genomes_project 4 109134377 109141884 - MGP_129S1SvImJ_P0066837 Gpx7 protein_coding protein_coding MGP_129S1SvImJ_T0014644.1 MGP_129S1SvImJ_G0012733.1 mouse_genomes_project 4 81012217 81017983 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004468.1 MGP_129S1SvImJ_G0003896.1 mouse_genomes_project 4 43219253 43222973 + 1700055D18Rik antisense antisense MGP_129S1SvImJ_T0004469.1 MGP_129S1SvImJ_G0003896.1 mouse_genomes_project 4 43220396 43221966 + 1700055D18Rik antisense antisense MGP_129S1SvImJ_T0068915.1 MGP_129S1SvImJ_G0029020.1 mouse_genomes_project 4 142447683 142513203 + MGP_129S1SvImJ_P0068915 Gm21969 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0067074.1 MGP_129S1SvImJ_G0028608.1 mouse_genomes_project 4 116626749 116641226 + MGP_129S1SvImJ_P0067074 Atpaf1 protein_coding protein_coding MGP_129S1SvImJ_T0067075.1 MGP_129S1SvImJ_G0028608.1 mouse_genomes_project 4 116626916 116657005 + MGP_129S1SvImJ_P0067075 Atpaf1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0014449.1 MGP_129S1SvImJ_G0012538.1 mouse_genomes_project 4 15174186 15174408 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007985.1 MGP_129S1SvImJ_G0006523.1 mouse_genomes_project 4 133051690 133061267 - A930031H19Rik lincRNA lincRNA MGP_129S1SvImJ_T0007986.1 MGP_129S1SvImJ_G0006523.1 mouse_genomes_project 4 133051690 133056769 - A930031H19Rik lincRNA lincRNA MGP_129S1SvImJ_T0014524.1 MGP_129S1SvImJ_G0012613.1 mouse_genomes_project 4 36064561 36065105 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064801.1 MGP_129S1SvImJ_G0028080.1 mouse_genomes_project 4 16538500 16596874 - MGP_129S1SvImJ_P0064801 Cpne3 protein_coding protein_coding MGP_129S1SvImJ_T0064802.1 MGP_129S1SvImJ_G0028080.1 mouse_genomes_project 4 16565877 16568936 - Cpne3 protein_coding processed_transcript MGP_129S1SvImJ_T0064803.1 MGP_129S1SvImJ_G0028080.1 mouse_genomes_project 4 16575038 16596849 - Cpne3 protein_coding retained_intron MGP_129S1SvImJ_T0000001.1 MGP_129S1SvImJ_G0000001.1 mouse_genomes_project 4 118837398 118871757 - Gm17114 3prime_overlapping_ncRNA 3prime_overlapping_ncRNA MGP_129S1SvImJ_T0007923.1 MGP_129S1SvImJ_G0006481.1 mouse_genomes_project 4 103805923 103930349 + Gm12718 lincRNA lincRNA MGP_129S1SvImJ_T0007924.1 MGP_129S1SvImJ_G0006481.1 mouse_genomes_project 4 103805944 103930331 + Gm12718 lincRNA lincRNA MGP_129S1SvImJ_T0014474.1 MGP_129S1SvImJ_G0012563.1 mouse_genomes_project 4 22518247 22520083 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069603.1 MGP_129S1SvImJ_G0029186.1 mouse_genomes_project 4 158196595 158207175 - MGP_129S1SvImJ_P0069603 Dffb protein_coding protein_coding MGP_129S1SvImJ_T0069604.1 MGP_129S1SvImJ_G0029186.1 mouse_genomes_project 4 158197516 158204024 - MGP_129S1SvImJ_P0069604 Dffb protein_coding unknown_likely_coding MGP_129S1SvImJ_T0069605.1 MGP_129S1SvImJ_G0029186.1 mouse_genomes_project 4 158201219 158207100 - Dffb protein_coding processed_transcript MGP_129S1SvImJ_T0069606.1 MGP_129S1SvImJ_G0029186.1 mouse_genomes_project 4 158204576 158207106 - Dffb protein_coding retained_intron MGP_129S1SvImJ_T0069607.1 MGP_129S1SvImJ_G0029186.1 mouse_genomes_project 4 158204724 158207038 - MGP_129S1SvImJ_P0069607 Dffb protein_coding unknown_likely_coding MGP_129S1SvImJ_T0069608.1 MGP_129S1SvImJ_G0029186.1 mouse_genomes_project 4 158206551 158207130 - Dffb protein_coding retained_intron MGP_129S1SvImJ_T0007894.1 MGP_129S1SvImJ_G0006457.1 mouse_genomes_project 4 84383406 84384223 + Gm12415 lincRNA lincRNA MGP_129S1SvImJ_T0066569.1 MGP_129S1SvImJ_G0028503.1 mouse_genomes_project 4 103419744 103424048 - MGP_129S1SvImJ_P0066569 Insl5 protein_coding protein_coding MGP_129S1SvImJ_T0066570.1 MGP_129S1SvImJ_G0028503.1 mouse_genomes_project 4 103419986 103424153 - MGP_129S1SvImJ_P0066570 Insl5 protein_coding protein_coding MGP_129S1SvImJ_T0069104.1 MGP_129S1SvImJ_G0029066.1 mouse_genomes_project 4 146471935 146514758 - MGP_129S1SvImJ_P0069104 Pdpn protein_coding protein_coding MGP_129S1SvImJ_T0069105.1 MGP_129S1SvImJ_G0029066.1 mouse_genomes_project 4 146472849 146514657 - MGP_129S1SvImJ_P0069105 Pdpn protein_coding protein_coding MGP_129S1SvImJ_T0007865.1 MGP_129S1SvImJ_G0006432.1 mouse_genomes_project 4 54713334 54740062 - Gm12519 lincRNA lincRNA MGP_129S1SvImJ_T0007827.1 MGP_129S1SvImJ_G0006399.1 mouse_genomes_project 4 21545844 21546353 - Gm27243 lincRNA lincRNA MGP_129S1SvImJ_T0101090.1 MGP_129S1SvImJ_G0039157.1 mouse_genomes_project 4 4389174 4389306 + Gm23860 snoRNA snoRNA MGP_129S1SvImJ_T0001426.1 MGP_129S1SvImJ_G0001349.1 mouse_genomes_project 4 9344069 9423724 + TEC TEC MGP_129S1SvImJ_T0014641.1 MGP_129S1SvImJ_G0012730.1 mouse_genomes_project 4 79519115 79519628 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066976.1 MGP_129S1SvImJ_G0028579.1 mouse_genomes_project 4 112577841 112692711 + MGP_129S1SvImJ_P0066976 Spata6 protein_coding protein_coding MGP_129S1SvImJ_T0066977.1 MGP_129S1SvImJ_G0028579.1 mouse_genomes_project 4 112577866 112624626 + MGP_129S1SvImJ_P0066977 Spata6 protein_coding protein_coding MGP_129S1SvImJ_T0066978.1 MGP_129S1SvImJ_G0028579.1 mouse_genomes_project 4 112577867 112667047 + Spata6 protein_coding processed_transcript MGP_129S1SvImJ_T0066979.1 MGP_129S1SvImJ_G0028579.1 mouse_genomes_project 4 112577895 112635179 + MGP_129S1SvImJ_P0066979 Spata6 protein_coding protein_coding MGP_129S1SvImJ_T0066980.1 MGP_129S1SvImJ_G0028579.1 mouse_genomes_project 4 112577916 112624686 + Spata6 protein_coding processed_transcript MGP_129S1SvImJ_T0066981.1 MGP_129S1SvImJ_G0028579.1 mouse_genomes_project 4 112577920 112635899 + Spata6 protein_coding processed_transcript MGP_129S1SvImJ_T0066982.1 MGP_129S1SvImJ_G0028579.1 mouse_genomes_project 4 112577960 112636484 + Spata6 protein_coding processed_transcript MGP_129S1SvImJ_T0066983.1 MGP_129S1SvImJ_G0028579.1 mouse_genomes_project 4 112577986 112635949 + Spata6 protein_coding processed_transcript MGP_129S1SvImJ_T0066984.1 MGP_129S1SvImJ_G0028579.1 mouse_genomes_project 4 112578062 112692753 + MGP_129S1SvImJ_P0066984 Spata6 protein_coding protein_coding MGP_129S1SvImJ_T0066985.1 MGP_129S1SvImJ_G0028579.1 mouse_genomes_project 4 112631688 112691763 + Spata6 protein_coding processed_transcript MGP_129S1SvImJ_T0066986.1 MGP_129S1SvImJ_G0028579.1 mouse_genomes_project 4 112634449 112692703 + Spata6 protein_coding processed_transcript MGP_129S1SvImJ_T0066987.1 MGP_129S1SvImJ_G0028579.1 mouse_genomes_project 4 112634488 112637183 + Spata6 protein_coding processed_transcript MGP_129S1SvImJ_T0066988.1 MGP_129S1SvImJ_G0028579.1 mouse_genomes_project 4 112665910 112685179 + Spata6 protein_coding processed_transcript MGP_129S1SvImJ_T0066989.1 MGP_129S1SvImJ_G0028579.1 mouse_genomes_project 4 112684639 112691771 + Spata6 protein_coding processed_transcript MGP_129S1SvImJ_T0004473.1 MGP_129S1SvImJ_G0003899.1 mouse_genomes_project 4 45566199 45577233 - Gm12426 antisense antisense MGP_129S1SvImJ_T0007864.1 MGP_129S1SvImJ_G0006431.1 mouse_genomes_project 4 54331540 54367633 + Gm12506 lincRNA lincRNA MGP_129S1SvImJ_T0064751.1 MGP_129S1SvImJ_G0028063.1 mouse_genomes_project 4 8857462 8878292 - MGP_129S1SvImJ_P0064751 Fam92a protein_coding protein_coding MGP_129S1SvImJ_T0064752.1 MGP_129S1SvImJ_G0028063.1 mouse_genomes_project 4 8857462 8878272 - MGP_129S1SvImJ_P0064752 Fam92a protein_coding protein_coding MGP_129S1SvImJ_T0064753.1 MGP_129S1SvImJ_G0028063.1 mouse_genomes_project 4 8861987 8877445 - MGP_129S1SvImJ_P0064753 Fam92a protein_coding protein_coding MGP_129S1SvImJ_T0064754.1 MGP_129S1SvImJ_G0028063.1 mouse_genomes_project 4 8870397 8878148 - MGP_129S1SvImJ_P0064754 Fam92a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064755.1 MGP_129S1SvImJ_G0028063.1 mouse_genomes_project 4 8871619 8878272 - Fam92a protein_coding retained_intron MGP_129S1SvImJ_T0064756.1 MGP_129S1SvImJ_G0028063.1 mouse_genomes_project 4 8871886 8878011 - Fam92a protein_coding retained_intron MGP_129S1SvImJ_T0004607.1 MGP_129S1SvImJ_G0004001.1 mouse_genomes_project 4 152741777 152749433 + Gm17029 antisense antisense MGP_129S1SvImJ_T0004608.1 MGP_129S1SvImJ_G0004001.1 mouse_genomes_project 4 152741806 152776870 + Gm17029 antisense antisense MGP_129S1SvImJ_T0004609.1 MGP_129S1SvImJ_G0004001.1 mouse_genomes_project 4 152741840 152748469 + Gm17029 antisense antisense MGP_129S1SvImJ_T0065809.1 MGP_129S1SvImJ_G0028314.1 mouse_genomes_project 4 55730915 55765667 - MGP_129S1SvImJ_P0065809 Frrs1l protein_coding protein_coding MGP_129S1SvImJ_T0065810.1 MGP_129S1SvImJ_G0028314.1 mouse_genomes_project 4 55733904 55765412 - MGP_129S1SvImJ_P0065810 Frrs1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0014810.1 MGP_129S1SvImJ_G0012899.1 mouse_genomes_project 4 136854677 136855430 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004476.1 MGP_129S1SvImJ_G0003902.1 mouse_genomes_project 4 52208559 52210274 - 1700060J05Rik antisense antisense MGP_129S1SvImJ_T0001438.1 MGP_129S1SvImJ_G0001361.1 mouse_genomes_project 4 120483861 120484295 - TEC TEC MGP_129S1SvImJ_T0065663.1 MGP_129S1SvImJ_G0028272.1 mouse_genomes_project 4 46611625 46699219 - MGP_129S1SvImJ_P0065663 Erp44 protein_coding protein_coding MGP_129S1SvImJ_T0065664.1 MGP_129S1SvImJ_G0028272.1 mouse_genomes_project 4 46612792 46615327 - Erp44 protein_coding processed_transcript MGP_129S1SvImJ_T0065665.1 MGP_129S1SvImJ_G0028272.1 mouse_genomes_project 4 46660918 46667147 - Erp44 protein_coding processed_transcript MGP_129S1SvImJ_T0065666.1 MGP_129S1SvImJ_G0028272.1 mouse_genomes_project 4 46663561 46699113 - Erp44 protein_coding processed_transcript MGP_129S1SvImJ_T0064669.1 MGP_129S1SvImJ_G0028043.1 mouse_genomes_project 4 6477384 6497088 + MGP_129S1SvImJ_P0064669 Gdf6 protein_coding protein_coding MGP_129S1SvImJ_T0068182.1 MGP_129S1SvImJ_G0028856.1 mouse_genomes_project 4 132998106 133008229 + MGP_129S1SvImJ_P0068182 Matn1 protein_coding protein_coding MGP_129S1SvImJ_T0068111.1 MGP_129S1SvImJ_G0028842.1 mouse_genomes_project 4 132028938 132084129 + MGP_129S1SvImJ_P0068111 Col16a1 protein_coding protein_coding MGP_129S1SvImJ_T0068112.1 MGP_129S1SvImJ_G0028842.1 mouse_genomes_project 4 132028973 132030813 + MGP_129S1SvImJ_P0068112 Col16a1 protein_coding protein_coding MGP_129S1SvImJ_T0068113.1 MGP_129S1SvImJ_G0028842.1 mouse_genomes_project 4 132028983 132076902 + Col16a1 protein_coding processed_transcript MGP_129S1SvImJ_T0068114.1 MGP_129S1SvImJ_G0028842.1 mouse_genomes_project 4 132029007 132062115 + Col16a1 protein_coding processed_transcript MGP_129S1SvImJ_T0068115.1 MGP_129S1SvImJ_G0028842.1 mouse_genomes_project 4 132029043 132032942 + MGP_129S1SvImJ_P0068115 Col16a1 protein_coding protein_coding MGP_129S1SvImJ_T0068116.1 MGP_129S1SvImJ_G0028842.1 mouse_genomes_project 4 132029060 132084135 + MGP_129S1SvImJ_P0068116 Col16a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068117.1 MGP_129S1SvImJ_G0028842.1 mouse_genomes_project 4 132036077 132039641 + MGP_129S1SvImJ_P0068117 Col16a1 protein_coding protein_coding MGP_129S1SvImJ_T0068118.1 MGP_129S1SvImJ_G0028842.1 mouse_genomes_project 4 132036122 132037087 + Col16a1 protein_coding retained_intron MGP_129S1SvImJ_T0068119.1 MGP_129S1SvImJ_G0028842.1 mouse_genomes_project 4 132037049 132084129 + MGP_129S1SvImJ_P0068119 Col16a1 protein_coding protein_coding MGP_129S1SvImJ_T0068120.1 MGP_129S1SvImJ_G0028842.1 mouse_genomes_project 4 132049175 132063213 + Col16a1 protein_coding processed_transcript MGP_129S1SvImJ_T0068121.1 MGP_129S1SvImJ_G0028842.1 mouse_genomes_project 4 132058811 132061922 + Col16a1 protein_coding processed_transcript MGP_129S1SvImJ_T0068122.1 MGP_129S1SvImJ_G0028842.1 mouse_genomes_project 4 132060736 132062334 + Col16a1 protein_coding processed_transcript MGP_129S1SvImJ_T0068123.1 MGP_129S1SvImJ_G0028842.1 mouse_genomes_project 4 132082457 132084128 + Col16a1 protein_coding processed_transcript MGP_129S1SvImJ_T0014712.1 MGP_129S1SvImJ_G0012801.1 mouse_genomes_project 4 105493923 105494191 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099826.1 MGP_129S1SvImJ_G0037893.1 mouse_genomes_project 4 39285614 39285718 - Gm26084 snRNA snRNA MGP_129S1SvImJ_T0014684.1 MGP_129S1SvImJ_G0012773.1 mouse_genomes_project 4 96175025 96175304 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007984.1 MGP_129S1SvImJ_G0006522.1 mouse_genomes_project 4 133027474 133052198 + Gm12973 lincRNA lincRNA MGP_129S1SvImJ_T0068141.1 MGP_129S1SvImJ_G0028847.1 mouse_genomes_project 4 132255954 132281768 - MGP_129S1SvImJ_P0068141 Serinc2 protein_coding protein_coding MGP_129S1SvImJ_T0068142.1 MGP_129S1SvImJ_G0028847.1 mouse_genomes_project 4 132255954 132281400 - MGP_129S1SvImJ_P0068142 Serinc2 protein_coding protein_coding MGP_129S1SvImJ_T0068143.1 MGP_129S1SvImJ_G0028847.1 mouse_genomes_project 4 132256358 132285400 - MGP_129S1SvImJ_P0068143 Serinc2 protein_coding protein_coding MGP_129S1SvImJ_T0068144.1 MGP_129S1SvImJ_G0028847.1 mouse_genomes_project 4 132267139 132281714 - MGP_129S1SvImJ_P0068144 Serinc2 protein_coding protein_coding MGP_129S1SvImJ_T0068145.1 MGP_129S1SvImJ_G0028847.1 mouse_genomes_project 4 132267754 132281727 - MGP_129S1SvImJ_P0068145 Serinc2 protein_coding protein_coding MGP_129S1SvImJ_T0099846.1 MGP_129S1SvImJ_G0037913.1 mouse_genomes_project 4 97026190 97026253 + Gm27579 snRNA snRNA MGP_129S1SvImJ_T0069484.1 MGP_129S1SvImJ_G0029165.1 mouse_genomes_project 4 156071096 156080158 - MGP_129S1SvImJ_P0069484 Thap3 protein_coding protein_coding MGP_129S1SvImJ_T0069485.1 MGP_129S1SvImJ_G0029165.1 mouse_genomes_project 4 156071259 156080131 - MGP_129S1SvImJ_P0069485 Thap3 protein_coding protein_coding MGP_129S1SvImJ_T0069486.1 MGP_129S1SvImJ_G0029165.1 mouse_genomes_project 4 156076618 156080141 - Thap3 protein_coding retained_intron MGP_129S1SvImJ_T0018120.1 MGP_129S1SvImJ_G0015574.1 mouse_genomes_project 4 126282145 126298984 - Gm12915 processed_transcript processed_transcript MGP_129S1SvImJ_T0101101.1 MGP_129S1SvImJ_G0039168.1 mouse_genomes_project 4 37123833 37123959 + Gm23607 snoRNA snoRNA MGP_129S1SvImJ_T0011836.1 MGP_129S1SvImJ_G0009942.1 mouse_genomes_project 4 119414816 119417604 + MGP_129S1SvImJ_P0011836 Hyi polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0011837.1 MGP_129S1SvImJ_G0009942.1 mouse_genomes_project 4 119414825 119416146 + Hyi polymorphic_pseudogene retained_intron MGP_129S1SvImJ_T0011838.1 MGP_129S1SvImJ_G0009942.1 mouse_genomes_project 4 119414825 119417604 + MGP_129S1SvImJ_P0011838 Hyi polymorphic_pseudogene nonsense_mediated_decay MGP_129S1SvImJ_T0011839.1 MGP_129S1SvImJ_G0009942.1 mouse_genomes_project 4 119414840 119417604 + MGP_129S1SvImJ_P0011839 Hyi polymorphic_pseudogene protein_coding MGP_129S1SvImJ_T0011840.1 MGP_129S1SvImJ_G0009942.1 mouse_genomes_project 4 119416175 119417355 + Hyi polymorphic_pseudogene retained_intron MGP_129S1SvImJ_T0067381.1 MGP_129S1SvImJ_G0009942.1 mouse_genomes_project 4 119414859 119417611 + MGP_129S1SvImJ_P0067381 Hyi polymorphic_pseudogene unknown_likely_coding MGP_129S1SvImJ_T0018143.1 MGP_129S1SvImJ_G0015583.1 mouse_genomes_project 4 156542114 156545662 - Gm16334 processed_transcript processed_transcript MGP_129S1SvImJ_T0102542.1 MGP_129S1SvImJ_G0040375.1 mouse_genomes_project 4 122791318 122793964 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0065755.1 MGP_129S1SvImJ_G0028300.1 mouse_genomes_project 4 52271822 52347759 + MGP_129S1SvImJ_P0065755 Fsd1l protein_coding protein_coding MGP_129S1SvImJ_T0065756.1 MGP_129S1SvImJ_G0028300.1 mouse_genomes_project 4 52271841 52293421 + Fsd1l protein_coding retained_intron MGP_129S1SvImJ_T0065757.1 MGP_129S1SvImJ_G0028300.1 mouse_genomes_project 4 52271842 52288251 + Fsd1l protein_coding retained_intron MGP_129S1SvImJ_T0065758.1 MGP_129S1SvImJ_G0028300.1 mouse_genomes_project 4 52271920 52341153 + MGP_129S1SvImJ_P0065758 Fsd1l protein_coding protein_coding MGP_129S1SvImJ_T0065759.1 MGP_129S1SvImJ_G0028300.1 mouse_genomes_project 4 52271925 52341151 + MGP_129S1SvImJ_P0065759 Fsd1l protein_coding protein_coding MGP_129S1SvImJ_T0065760.1 MGP_129S1SvImJ_G0028300.1 mouse_genomes_project 4 52272067 52302626 + MGP_129S1SvImJ_P0065760 Fsd1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0065761.1 MGP_129S1SvImJ_G0028300.1 mouse_genomes_project 4 52283631 52347759 + MGP_129S1SvImJ_P0065761 Fsd1l protein_coding protein_coding MGP_129S1SvImJ_T0007804.1 MGP_129S1SvImJ_G0006381.1 mouse_genomes_project 4 4128217 4141325 + 8430436N08Rik lincRNA lincRNA MGP_129S1SvImJ_T0067181.1 MGP_129S1SvImJ_G0028629.1 mouse_genomes_project 4 117504954 117531113 - MGP_129S1SvImJ_P0067181 Nasp protein_coding protein_coding MGP_129S1SvImJ_T0067182.1 MGP_129S1SvImJ_G0028629.1 mouse_genomes_project 4 117505511 117531557 - MGP_129S1SvImJ_P0067182 Nasp protein_coding protein_coding MGP_129S1SvImJ_T0067183.1 MGP_129S1SvImJ_G0028629.1 mouse_genomes_project 4 117505511 117531094 - MGP_129S1SvImJ_P0067183 Nasp protein_coding protein_coding MGP_129S1SvImJ_T0067184.1 MGP_129S1SvImJ_G0028629.1 mouse_genomes_project 4 117506628 117510151 - Nasp protein_coding processed_transcript MGP_129S1SvImJ_T0067185.1 MGP_129S1SvImJ_G0028629.1 mouse_genomes_project 4 117506694 117508828 - Nasp protein_coding processed_transcript MGP_129S1SvImJ_T0067186.1 MGP_129S1SvImJ_G0028629.1 mouse_genomes_project 4 117515369 117531109 - Nasp protein_coding processed_transcript MGP_129S1SvImJ_T0067187.1 MGP_129S1SvImJ_G0028629.1 mouse_genomes_project 4 117520891 117527543 - Nasp protein_coding processed_transcript MGP_129S1SvImJ_T0067188.1 MGP_129S1SvImJ_G0028629.1 mouse_genomes_project 4 117522493 117531064 - Nasp protein_coding processed_transcript MGP_129S1SvImJ_T0069452.1 MGP_129S1SvImJ_G0029161.1 mouse_genomes_project 4 155032882 155074225 - MGP_129S1SvImJ_P0069452 Per3 protein_coding protein_coding MGP_129S1SvImJ_T0069453.1 MGP_129S1SvImJ_G0029161.1 mouse_genomes_project 4 155033016 155045729 - Per3 protein_coding processed_transcript MGP_129S1SvImJ_T0069454.1 MGP_129S1SvImJ_G0029161.1 mouse_genomes_project 4 155040900 155061074 - Per3 protein_coding retained_intron MGP_129S1SvImJ_T0069455.1 MGP_129S1SvImJ_G0029161.1 mouse_genomes_project 4 155040900 155074225 - MGP_129S1SvImJ_P0069455 Per3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069456.1 MGP_129S1SvImJ_G0029161.1 mouse_genomes_project 4 155053773 155074225 - Per3 protein_coding retained_intron MGP_129S1SvImJ_T0014568.1 MGP_129S1SvImJ_G0012657.1 mouse_genomes_project 4 51424633 51425199 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068814.1 MGP_129S1SvImJ_G0028992.1 mouse_genomes_project 4 140969706 141028943 + MGP_129S1SvImJ_P0068814 Kif17 protein_coding protein_coding MGP_129S1SvImJ_T0068817.1 MGP_129S1SvImJ_G0028992.1 mouse_genomes_project 4 140981934 141028468 + MGP_129S1SvImJ_P0068817 Kif17 protein_coding protein_coding MGP_129S1SvImJ_T0068818.1 MGP_129S1SvImJ_G0028992.1 mouse_genomes_project 4 140982174 141028358 + MGP_129S1SvImJ_P0068818 Kif17 protein_coding protein_coding MGP_129S1SvImJ_T0068819.1 MGP_129S1SvImJ_G0028992.1 mouse_genomes_project 4 140982201 141010752 + Kif17 protein_coding retained_intron MGP_129S1SvImJ_T0068734.1 MGP_129S1SvImJ_G0028981.1 mouse_genomes_project 4 140045984 140055914 - MGP_129S1SvImJ_P0068734 protein_coding protein_coding MGP_129S1SvImJ_T0068735.1 MGP_129S1SvImJ_G0028981.1 mouse_genomes_project 4 140045993 140047879 - protein_coding processed_transcript MGP_129S1SvImJ_T0011579.1 MGP_129S1SvImJ_G0009695.1 mouse_genomes_project 4 29969974 29970241 + Gm24371 misc_RNA misc_RNA MGP_129S1SvImJ_T0069012.1 MGP_129S1SvImJ_G0029044.1 mouse_genomes_project 4 144424020 144439292 + MGP_129S1SvImJ_P0069012 Fam131c protein_coding protein_coding MGP_129S1SvImJ_T0018101.1 MGP_129S1SvImJ_G0015560.1 mouse_genomes_project 4 95559787 95563235 + Gm12707 processed_transcript processed_transcript MGP_129S1SvImJ_T0101122.1 MGP_129S1SvImJ_G0039189.1 mouse_genomes_project 4 61820559 61820692 + Gm24117 snoRNA snoRNA MGP_129S1SvImJ_T0065906.1 MGP_129S1SvImJ_G0028339.1 mouse_genomes_project 4 58694569 58706025 - MGP_129S1SvImJ_P0065906 Inip protein_coding protein_coding MGP_129S1SvImJ_T0065907.1 MGP_129S1SvImJ_G0028339.1 mouse_genomes_project 4 58696293 58705984 - Inip protein_coding processed_transcript MGP_129S1SvImJ_T0065908.1 MGP_129S1SvImJ_G0028339.1 mouse_genomes_project 4 58703155 58705995 - Inip protein_coding processed_transcript MGP_129S1SvImJ_T0069035.1 MGP_129S1SvImJ_G0029050.1 mouse_genomes_project 4 144655614 144680219 - MGP_129S1SvImJ_P0069035 Fblim1 protein_coding protein_coding MGP_129S1SvImJ_T0069036.1 MGP_129S1SvImJ_G0029050.1 mouse_genomes_project 4 144655614 144678526 - MGP_129S1SvImJ_P0069036 Fblim1 protein_coding protein_coding MGP_129S1SvImJ_T0069037.1 MGP_129S1SvImJ_G0029050.1 mouse_genomes_project 4 144655614 144686352 - MGP_129S1SvImJ_P0069037 Fblim1 protein_coding protein_coding MGP_129S1SvImJ_T0069038.1 MGP_129S1SvImJ_G0029050.1 mouse_genomes_project 4 144669605 144680130 - MGP_129S1SvImJ_P0069038 Fblim1 protein_coding protein_coding MGP_129S1SvImJ_T0069039.1 MGP_129S1SvImJ_G0029050.1 mouse_genomes_project 4 144669627 144686396 - MGP_129S1SvImJ_P0069039 Fblim1 protein_coding protein_coding MGP_129S1SvImJ_T0069040.1 MGP_129S1SvImJ_G0029050.1 mouse_genomes_project 4 144669627 144686337 - MGP_129S1SvImJ_P0069040 Fblim1 protein_coding protein_coding MGP_129S1SvImJ_T0069041.1 MGP_129S1SvImJ_G0029050.1 mouse_genomes_project 4 144669650 144678819 - MGP_129S1SvImJ_P0069041 Fblim1 protein_coding protein_coding MGP_129S1SvImJ_T0069042.1 MGP_129S1SvImJ_G0029050.1 mouse_genomes_project 4 144670294 144680327 - MGP_129S1SvImJ_P0069042 Fblim1 protein_coding protein_coding MGP_129S1SvImJ_T0069043.1 MGP_129S1SvImJ_G0029050.1 mouse_genomes_project 4 144670357 144676766 - Fblim1 protein_coding processed_transcript MGP_129S1SvImJ_T0069044.1 MGP_129S1SvImJ_G0029050.1 mouse_genomes_project 4 144670373 144680183 - MGP_129S1SvImJ_P0069044 Fblim1 protein_coding protein_coding MGP_129S1SvImJ_T0069045.1 MGP_129S1SvImJ_G0029050.1 mouse_genomes_project 4 144670374 144678526 - MGP_129S1SvImJ_P0069045 Fblim1 protein_coding protein_coding MGP_129S1SvImJ_T0069046.1 MGP_129S1SvImJ_G0029050.1 mouse_genomes_project 4 144670384 144678508 - MGP_129S1SvImJ_P0069046 Fblim1 protein_coding protein_coding MGP_129S1SvImJ_T0069047.1 MGP_129S1SvImJ_G0029050.1 mouse_genomes_project 4 144675544 144686325 - MGP_129S1SvImJ_P0069047 Fblim1 protein_coding protein_coding MGP_129S1SvImJ_T0069048.1 MGP_129S1SvImJ_G0029050.1 mouse_genomes_project 4 144675595 144686336 - MGP_129S1SvImJ_P0069048 Fblim1 protein_coding protein_coding MGP_129S1SvImJ_T0069049.1 MGP_129S1SvImJ_G0029050.1 mouse_genomes_project 4 144675662 144686327 - MGP_129S1SvImJ_P0069049 Fblim1 protein_coding protein_coding MGP_129S1SvImJ_T0068820.1 MGP_129S1SvImJ_G0028993.1 mouse_genomes_project 4 141031707 141041039 + MGP_129S1SvImJ_P0068820 Ddost protein_coding protein_coding MGP_129S1SvImJ_T0014787.1 MGP_129S1SvImJ_G0012876.1 mouse_genomes_project 4 128204016 128204435 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069120.1 MGP_129S1SvImJ_G0029076.1 mouse_genomes_project 4 147069699 147081476 + MGP_129S1SvImJ_P0069120 protein_coding protein_coding MGP_129S1SvImJ_T0069195.1 MGP_129S1SvImJ_G0029111.1 mouse_genomes_project 4 151624655 151630745 + MGP_129S1SvImJ_P0069195 2510039O18Rik protein_coding protein_coding MGP_129S1SvImJ_T0065960.1 MGP_129S1SvImJ_G0028358.1 mouse_genomes_project 4 61516525 61539363 + MGP_129S1SvImJ_P0065960 4933430I17Rik protein_coding protein_coding MGP_129S1SvImJ_T0065961.1 MGP_129S1SvImJ_G0028358.1 mouse_genomes_project 4 61516973 61539132 + MGP_129S1SvImJ_P0065961 4933430I17Rik protein_coding unknown_likely_coding MGP_129S1SvImJ_T0011841.1 MGP_129S1SvImJ_G0009943.1 mouse_genomes_project 4 141618741 141622068 + MGP_129S1SvImJ_P0011841 Pla2g2a polymorphic_pseudogene protein_coding MGP_129S1SvImJ_T0011842.1 MGP_129S1SvImJ_G0009943.1 mouse_genomes_project 4 141618744 141622071 + MGP_129S1SvImJ_P0011842 Pla2g2a polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0011843.1 MGP_129S1SvImJ_G0009943.1 mouse_genomes_project 4 141618760 141620754 + Pla2g2a polymorphic_pseudogene processed_transcript MGP_129S1SvImJ_T0011844.1 MGP_129S1SvImJ_G0009943.1 mouse_genomes_project 4 141620143 141622071 + Pla2g2a polymorphic_pseudogene retained_intron MGP_129S1SvImJ_T0008002.1 MGP_129S1SvImJ_G0006532.1 mouse_genomes_project 4 135309909 135313089 + Gm26615 lincRNA lincRNA MGP_129S1SvImJ_T0011593.1 MGP_129S1SvImJ_G0009709.1 mouse_genomes_project 4 89391436 89391585 + Gm27580 misc_RNA misc_RNA MGP_129S1SvImJ_T0067730.1 MGP_129S1SvImJ_G0028763.1 mouse_genomes_project 4 126650545 126657920 + MGP_129S1SvImJ_P0067730 Snip1 protein_coding protein_coding MGP_129S1SvImJ_T0067731.1 MGP_129S1SvImJ_G0028763.1 mouse_genomes_project 4 126650575 126655179 + Snip1 protein_coding processed_transcript MGP_129S1SvImJ_T0007988.1 MGP_129S1SvImJ_G0006525.1 mouse_genomes_project 4 133741614 133766901 - Gm12962 lincRNA lincRNA MGP_129S1SvImJ_T0007989.1 MGP_129S1SvImJ_G0006525.1 mouse_genomes_project 4 133741942 133771378 - Gm12962 lincRNA lincRNA MGP_129S1SvImJ_T0099868.1 MGP_129S1SvImJ_G0037935.1 mouse_genomes_project 4 122390810 122390974 - Gm23540 snRNA snRNA MGP_129S1SvImJ_T0066814.1 MGP_129S1SvImJ_G0028549.1 mouse_genomes_project 4 108884174 108898020 + MGP_129S1SvImJ_P0066814 Echdc2 protein_coding protein_coding MGP_129S1SvImJ_T0066815.1 MGP_129S1SvImJ_G0028549.1 mouse_genomes_project 4 108884203 108898019 + MGP_129S1SvImJ_P0066815 Echdc2 protein_coding protein_coding MGP_129S1SvImJ_T0066816.1 MGP_129S1SvImJ_G0028549.1 mouse_genomes_project 4 108884203 108897783 + MGP_129S1SvImJ_P0066816 Echdc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066817.1 MGP_129S1SvImJ_G0028549.1 mouse_genomes_project 4 108884225 108898018 + MGP_129S1SvImJ_P0066817 Echdc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066818.1 MGP_129S1SvImJ_G0028549.1 mouse_genomes_project 4 108884255 108897780 + MGP_129S1SvImJ_P0066818 Echdc2 protein_coding protein_coding MGP_129S1SvImJ_T0066819.1 MGP_129S1SvImJ_G0028549.1 mouse_genomes_project 4 108888421 108897644 + MGP_129S1SvImJ_P0066819 Echdc2 protein_coding protein_coding MGP_129S1SvImJ_T0066820.1 MGP_129S1SvImJ_G0028549.1 mouse_genomes_project 4 108888493 108894116 + Echdc2 protein_coding retained_intron MGP_129S1SvImJ_T0066821.1 MGP_129S1SvImJ_G0028549.1 mouse_genomes_project 4 108888849 108898019 + Echdc2 protein_coding processed_transcript MGP_129S1SvImJ_T0066822.1 MGP_129S1SvImJ_G0028549.1 mouse_genomes_project 4 108888860 108892560 + Echdc2 protein_coding processed_transcript MGP_129S1SvImJ_T0066823.1 MGP_129S1SvImJ_G0028549.1 mouse_genomes_project 4 108890868 108897871 + MGP_129S1SvImJ_P0066823 Echdc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066824.1 MGP_129S1SvImJ_G0028549.1 mouse_genomes_project 4 108891371 108895811 + Echdc2 protein_coding retained_intron MGP_129S1SvImJ_T0066825.1 MGP_129S1SvImJ_G0028549.1 mouse_genomes_project 4 108892398 108897771 + Echdc2 protein_coding retained_intron MGP_129S1SvImJ_T0066826.1 MGP_129S1SvImJ_G0028549.1 mouse_genomes_project 4 108892518 108897800 + MGP_129S1SvImJ_P0066826 Echdc2 protein_coding protein_coding MGP_129S1SvImJ_T0014629.1 MGP_129S1SvImJ_G0012718.1 mouse_genomes_project 4 75145895 75146724 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069171.1 MGP_129S1SvImJ_G0029106.1 mouse_genomes_project 4 151499614 151521662 - MGP_129S1SvImJ_P0069171 Zfp933 protein_coding protein_coding MGP_129S1SvImJ_T0069172.1 MGP_129S1SvImJ_G0029106.1 mouse_genomes_project 4 151503191 151521662 - MGP_129S1SvImJ_P0069172 Zfp933 protein_coding protein_coding MGP_129S1SvImJ_T0069654.1 MGP_129S1SvImJ_G0029195.1 mouse_genomes_project 4 158540044 158544054 - Arhgef16 protein_coding retained_intron MGP_129S1SvImJ_T0069655.1 MGP_129S1SvImJ_G0029195.1 mouse_genomes_project 4 158540044 158564848 - Arhgef16 protein_coding retained_intron MGP_129S1SvImJ_T0069656.1 MGP_129S1SvImJ_G0029195.1 mouse_genomes_project 4 158540044 158565010 - MGP_129S1SvImJ_P0069656 Arhgef16 protein_coding protein_coding MGP_129S1SvImJ_T0069657.1 MGP_129S1SvImJ_G0029195.1 mouse_genomes_project 4 158540308 158566617 - MGP_129S1SvImJ_P0069657 Arhgef16 protein_coding protein_coding MGP_129S1SvImJ_T0069658.1 MGP_129S1SvImJ_G0029195.1 mouse_genomes_project 4 158543572 158550557 - Arhgef16 protein_coding processed_transcript MGP_129S1SvImJ_T0069659.1 MGP_129S1SvImJ_G0029195.1 mouse_genomes_project 4 158550508 158564848 - MGP_129S1SvImJ_P0069659 Arhgef16 protein_coding protein_coding MGP_129S1SvImJ_T0069660.1 MGP_129S1SvImJ_G0029195.1 mouse_genomes_project 4 158555999 158566630 - MGP_129S1SvImJ_P0069660 Arhgef16 protein_coding protein_coding MGP_129S1SvImJ_T0014766.1 MGP_129S1SvImJ_G0012855.1 mouse_genomes_project 4 122195636 122196074 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008001.1 MGP_129S1SvImJ_G0006531.1 mouse_genomes_project 4 134497508 134499272 + Gm17300 lincRNA lincRNA MGP_129S1SvImJ_T0069833.1 MGP_129S1SvImJ_G0029229.1 mouse_genomes_project 4 160166947 160167718 + Mrpl20 protein_coding processed_transcript MGP_129S1SvImJ_T0069834.1 MGP_129S1SvImJ_G0029229.1 mouse_genomes_project 4 160167047 160172963 + MGP_129S1SvImJ_P0069834 Mrpl20 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0069835.1 MGP_129S1SvImJ_G0029229.1 mouse_genomes_project 4 160167722 160173109 + MGP_129S1SvImJ_P0069835 Mrpl20 protein_coding protein_coding MGP_129S1SvImJ_T0069836.1 MGP_129S1SvImJ_G0029229.1 mouse_genomes_project 4 160167727 160171469 + MGP_129S1SvImJ_P0069836 Mrpl20 protein_coding protein_coding MGP_129S1SvImJ_T0069837.1 MGP_129S1SvImJ_G0029229.1 mouse_genomes_project 4 160167834 160173105 + Mrpl20 protein_coding processed_transcript MGP_129S1SvImJ_T0014461.1 MGP_129S1SvImJ_G0012550.1 mouse_genomes_project 4 19166496 19166895 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014686.1 MGP_129S1SvImJ_G0012775.1 mouse_genomes_project 4 98289230 98289686 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001435.1 MGP_129S1SvImJ_G0001358.1 mouse_genomes_project 4 99773129 99779189 + TEC TEC MGP_129S1SvImJ_T0098939.1 MGP_129S1SvImJ_G0037017.1 mouse_genomes_project 4 145171038 145176705 - Gm13053 sense_intronic sense_intronic MGP_129S1SvImJ_T0007993.1 MGP_129S1SvImJ_G0006529.1 mouse_genomes_project 4 134406092 134406250 + Gm28872 lincRNA lincRNA MGP_129S1SvImJ_T0010634.1 MGP_129S1SvImJ_G0008750.1 mouse_genomes_project 4 122054468 122054560 - Mir30e miRNA miRNA MGP_129S1SvImJ_T0014721.1 MGP_129S1SvImJ_G0012810.1 mouse_genomes_project 4 108371325 108371876 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067800.1 MGP_129S1SvImJ_G0028779.1 mouse_genomes_project 4 127996771 128000338 - MGP_129S1SvImJ_P0067800 Tekt2 protein_coding protein_coding MGP_129S1SvImJ_T0067801.1 MGP_129S1SvImJ_G0028779.1 mouse_genomes_project 4 127996773 127999849 - MGP_129S1SvImJ_P0067801 Tekt2 protein_coding protein_coding MGP_129S1SvImJ_T0067802.1 MGP_129S1SvImJ_G0028779.1 mouse_genomes_project 4 127998358 128000280 - Tekt2 protein_coding retained_intron MGP_129S1SvImJ_T0067803.1 MGP_129S1SvImJ_G0028779.1 mouse_genomes_project 4 127998989 128000293 - MGP_129S1SvImJ_P0067803 Tekt2 protein_coding protein_coding MGP_129S1SvImJ_T0067804.1 MGP_129S1SvImJ_G0028779.1 mouse_genomes_project 4 127999533 128000085 - MGP_129S1SvImJ_P0067804 Tekt2 protein_coding protein_coding MGP_129S1SvImJ_T0065852.1 MGP_129S1SvImJ_G0028325.1 mouse_genomes_project 4 57267859 57337716 - MGP_129S1SvImJ_P0065852 Lpar1 protein_coding protein_coding MGP_129S1SvImJ_T0065853.1 MGP_129S1SvImJ_G0028325.1 mouse_genomes_project 4 57267859 57391384 - MGP_129S1SvImJ_P0065853 Lpar1 protein_coding protein_coding MGP_129S1SvImJ_T0065854.1 MGP_129S1SvImJ_G0028325.1 mouse_genomes_project 4 57267859 57391580 - MGP_129S1SvImJ_P0065854 Lpar1 protein_coding protein_coding MGP_129S1SvImJ_T0065855.1 MGP_129S1SvImJ_G0028325.1 mouse_genomes_project 4 57267859 57391338 - MGP_129S1SvImJ_P0065855 Lpar1 protein_coding protein_coding MGP_129S1SvImJ_T0065856.1 MGP_129S1SvImJ_G0028325.1 mouse_genomes_project 4 57267859 57391655 - MGP_129S1SvImJ_P0065856 Lpar1 protein_coding protein_coding MGP_129S1SvImJ_T0065857.1 MGP_129S1SvImJ_G0028325.1 mouse_genomes_project 4 57322630 57386428 - MGP_129S1SvImJ_P0065857 Lpar1 protein_coding protein_coding MGP_129S1SvImJ_T0065858.1 MGP_129S1SvImJ_G0028325.1 mouse_genomes_project 4 57322685 57391925 - MGP_129S1SvImJ_P0065858 Lpar1 protein_coding protein_coding MGP_129S1SvImJ_T0065859.1 MGP_129S1SvImJ_G0028325.1 mouse_genomes_project 4 57322719 57391211 - MGP_129S1SvImJ_P0065859 Lpar1 protein_coding protein_coding MGP_129S1SvImJ_T0099843.1 MGP_129S1SvImJ_G0037910.1 mouse_genomes_project 4 92877130 92877238 - Gm22605 snRNA snRNA MGP_129S1SvImJ_T0014613.1 MGP_129S1SvImJ_G0012702.1 mouse_genomes_project 4 70903417 70905100 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007867.1 MGP_129S1SvImJ_G0006434.1 mouse_genomes_project 4 56083943 56091147 + Gm12536 lincRNA lincRNA MGP_129S1SvImJ_T0014581.1 MGP_129S1SvImJ_G0012670.1 mouse_genomes_project 4 54098429 54098814 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101705.1 MGP_129S1SvImJ_G0039713.1 mouse_genomes_project 4 42273436 42275672 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101706.1 MGP_129S1SvImJ_G0039713.1 mouse_genomes_project 4 42274786 42275092 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0067886.1 MGP_129S1SvImJ_G0028800.1 mouse_genomes_project 4 129719496 129762820 - MGP_129S1SvImJ_P0067886 CK137956 protein_coding protein_coding MGP_129S1SvImJ_T0014507.1 MGP_129S1SvImJ_G0012596.1 mouse_genomes_project 4 30491778 30492105 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007801.1 MGP_129S1SvImJ_G0006379.1 mouse_genomes_project 4 2069057 2075043 - Gm11782 lincRNA lincRNA MGP_129S1SvImJ_T0004519.1 MGP_129S1SvImJ_G0003932.1 mouse_genomes_project 4 108527474 108530423 - Lrp8os1 antisense antisense MGP_129S1SvImJ_T0004520.1 MGP_129S1SvImJ_G0003932.1 mouse_genomes_project 4 108527495 108530423 - Lrp8os1 antisense antisense MGP_129S1SvImJ_T0067929.1 MGP_129S1SvImJ_G0028810.1 mouse_genomes_project 4 130844679 130855105 + Ak2 protein_coding processed_transcript MGP_129S1SvImJ_T0067930.1 MGP_129S1SvImJ_G0028810.1 mouse_genomes_project 4 130845940 130864341 + MGP_129S1SvImJ_P0067930 Ak2 protein_coding protein_coding MGP_129S1SvImJ_T0067931.1 MGP_129S1SvImJ_G0028810.1 mouse_genomes_project 4 130845940 130861227 + MGP_129S1SvImJ_P0067931 Ak2 protein_coding protein_coding MGP_129S1SvImJ_T0067932.1 MGP_129S1SvImJ_G0028810.1 mouse_genomes_project 4 130846069 130861055 + MGP_129S1SvImJ_P0067932 Ak2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068302.1 MGP_129S1SvImJ_G0028878.1 mouse_genomes_project 4 134916599 134942844 - MGP_129S1SvImJ_P0068302 Smpdl3b protein_coding protein_coding MGP_129S1SvImJ_T0068303.1 MGP_129S1SvImJ_G0028878.1 mouse_genomes_project 4 134916607 134942637 - MGP_129S1SvImJ_P0068303 Smpdl3b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0014680.1 MGP_129S1SvImJ_G0012769.1 mouse_genomes_project 4 94552865 94553442 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014576.1 MGP_129S1SvImJ_G0012665.1 mouse_genomes_project 4 53533349 53534934 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066300.1 MGP_129S1SvImJ_G0028441.1 mouse_genomes_project 4 89232675 89243681 - MGP_129S1SvImJ_P0066300 Cdkn2a protein_coding protein_coding MGP_129S1SvImJ_T0066301.1 MGP_129S1SvImJ_G0028441.1 mouse_genomes_project 4 89232745 89255593 - MGP_129S1SvImJ_P0066301 Cdkn2a protein_coding protein_coding MGP_129S1SvImJ_T0069753.1 MGP_129S1SvImJ_G0029212.1 mouse_genomes_project 4 159707862 159722031 - Gabrd protein_coding processed_transcript MGP_129S1SvImJ_T0069754.1 MGP_129S1SvImJ_G0029212.1 mouse_genomes_project 4 159707862 159722096 - MGP_129S1SvImJ_P0069754 Gabrd protein_coding protein_coding MGP_129S1SvImJ_T0069755.1 MGP_129S1SvImJ_G0029212.1 mouse_genomes_project 4 159711447 159722020 - Gabrd protein_coding processed_transcript MGP_129S1SvImJ_T0065108.1 MGP_129S1SvImJ_G0028157.1 mouse_genomes_project 4 39125421 39210700 - MGP_129S1SvImJ_P0065108 Ubap2 protein_coding protein_coding MGP_129S1SvImJ_T0065109.1 MGP_129S1SvImJ_G0028157.1 mouse_genomes_project 4 39125424 39210691 - MGP_129S1SvImJ_P0065109 Ubap2 protein_coding protein_coding MGP_129S1SvImJ_T0065110.1 MGP_129S1SvImJ_G0028157.1 mouse_genomes_project 4 39126301 39126874 - MGP_129S1SvImJ_P0065110 Ubap2 protein_coding protein_coding MGP_129S1SvImJ_T0065111.1 MGP_129S1SvImJ_G0028157.1 mouse_genomes_project 4 39131150 39132010 - Ubap2 protein_coding processed_transcript MGP_129S1SvImJ_T0065112.1 MGP_129S1SvImJ_G0028157.1 mouse_genomes_project 4 39138826 39145761 - MGP_129S1SvImJ_P0065112 Ubap2 protein_coding protein_coding MGP_129S1SvImJ_T0065113.1 MGP_129S1SvImJ_G0028157.1 mouse_genomes_project 4 39153460 39183463 - MGP_129S1SvImJ_P0065113 Ubap2 protein_coding protein_coding MGP_129S1SvImJ_T0065114.1 MGP_129S1SvImJ_G0028157.1 mouse_genomes_project 4 39153463 39210672 - Ubap2 protein_coding processed_transcript MGP_129S1SvImJ_T0065115.1 MGP_129S1SvImJ_G0028157.1 mouse_genomes_project 4 39209621 39210683 - Ubap2 protein_coding processed_transcript MGP_129S1SvImJ_T0014724.1 MGP_129S1SvImJ_G0012813.1 mouse_genomes_project 4 109048167 109048475 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065749.1 MGP_129S1SvImJ_G0028299.1 mouse_genomes_project 4 52080872 52195318 + MGP_129S1SvImJ_P0065749 Slc44a1 protein_coding protein_coding MGP_129S1SvImJ_T0065750.1 MGP_129S1SvImJ_G0028299.1 mouse_genomes_project 4 52080872 52262678 + MGP_129S1SvImJ_P0065750 Slc44a1 protein_coding protein_coding MGP_129S1SvImJ_T0065751.1 MGP_129S1SvImJ_G0028299.1 mouse_genomes_project 4 52081130 52173066 + Slc44a1 protein_coding processed_transcript MGP_129S1SvImJ_T0065752.1 MGP_129S1SvImJ_G0028299.1 mouse_genomes_project 4 52081143 52213385 + MGP_129S1SvImJ_P0065752 Slc44a1 protein_coding protein_coding MGP_129S1SvImJ_T0065753.1 MGP_129S1SvImJ_G0028299.1 mouse_genomes_project 4 52081143 52209027 + MGP_129S1SvImJ_P0065753 Slc44a1 protein_coding protein_coding MGP_129S1SvImJ_T0065754.1 MGP_129S1SvImJ_G0028299.1 mouse_genomes_project 4 52242494 52262187 + Slc44a1 protein_coding processed_transcript MGP_129S1SvImJ_T0065059.1 MGP_129S1SvImJ_G0028144.1 mouse_genomes_project 4 38338085 38343029 + MGP_129S1SvImJ_P0065059 Tmem215 protein_coding protein_coding MGP_129S1SvImJ_T0065060.1 MGP_129S1SvImJ_G0028144.1 mouse_genomes_project 4 38339035 38341515 + MGP_129S1SvImJ_P0065060 Tmem215 protein_coding protein_coding MGP_129S1SvImJ_T0068627.1 MGP_129S1SvImJ_G0028953.1 mouse_genomes_project 4 138415096 138435668 + MGP_129S1SvImJ_P0068627 Fuca1 protein_coding protein_coding MGP_129S1SvImJ_T0068628.1 MGP_129S1SvImJ_G0028953.1 mouse_genomes_project 4 138424248 138429099 + Fuca1 protein_coding processed_transcript MGP_129S1SvImJ_T0068629.1 MGP_129S1SvImJ_G0028953.1 mouse_genomes_project 4 138427325 138434653 + Fuca1 protein_coding processed_transcript MGP_129S1SvImJ_T0068630.1 MGP_129S1SvImJ_G0028953.1 mouse_genomes_project 4 138427452 138429683 + Fuca1 protein_coding processed_transcript MGP_129S1SvImJ_T0068631.1 MGP_129S1SvImJ_G0028953.1 mouse_genomes_project 4 138432012 138434653 + Fuca1 protein_coding processed_transcript MGP_129S1SvImJ_T0010675.1 MGP_129S1SvImJ_G0008791.1 mouse_genomes_project 4 160425171 160425254 - Mir429 miRNA miRNA MGP_129S1SvImJ_T0067602.1 MGP_129S1SvImJ_G0028728.1 mouse_genomes_project 4 124239522 124267588 - MGP_129S1SvImJ_P0067602 Cap1 protein_coding protein_coding MGP_129S1SvImJ_T0067603.1 MGP_129S1SvImJ_G0028728.1 mouse_genomes_project 4 124239522 124267721 - MGP_129S1SvImJ_P0067603 Cap1 protein_coding protein_coding MGP_129S1SvImJ_T0067604.1 MGP_129S1SvImJ_G0028728.1 mouse_genomes_project 4 124239522 124267733 - MGP_129S1SvImJ_P0067604 Cap1 protein_coding protein_coding MGP_129S1SvImJ_T0067605.1 MGP_129S1SvImJ_G0028728.1 mouse_genomes_project 4 124244449 124246664 - Cap1 protein_coding processed_transcript MGP_129S1SvImJ_T0067606.1 MGP_129S1SvImJ_G0028728.1 mouse_genomes_project 4 124249363 124267642 - MGP_129S1SvImJ_P0067606 Cap1 protein_coding protein_coding MGP_129S1SvImJ_T0067607.1 MGP_129S1SvImJ_G0028728.1 mouse_genomes_project 4 124252711 124267537 - Cap1 protein_coding processed_transcript MGP_129S1SvImJ_T0067608.1 MGP_129S1SvImJ_G0028728.1 mouse_genomes_project 4 124253802 124267541 - Cap1 protein_coding processed_transcript MGP_129S1SvImJ_T0069210.1 MGP_129S1SvImJ_G0029116.1 mouse_genomes_project 4 151765117 151776021 - MGP_129S1SvImJ_P0069210 Agtrap protein_coding protein_coding MGP_129S1SvImJ_T0069211.1 MGP_129S1SvImJ_G0029116.1 mouse_genomes_project 4 151771978 151776021 - Agtrap protein_coding retained_intron MGP_129S1SvImJ_T0007959.1 MGP_129S1SvImJ_G0006507.1 mouse_genomes_project 4 127516957 127551369 - 2610028E06Rik lincRNA lincRNA MGP_129S1SvImJ_T0007960.1 MGP_129S1SvImJ_G0006507.1 mouse_genomes_project 4 127516957 127528055 - 2610028E06Rik lincRNA lincRNA MGP_129S1SvImJ_T0007961.1 MGP_129S1SvImJ_G0006507.1 mouse_genomes_project 4 127517303 127551476 - 2610028E06Rik lincRNA lincRNA MGP_129S1SvImJ_T0007962.1 MGP_129S1SvImJ_G0006507.1 mouse_genomes_project 4 127519521 127546198 - 2610028E06Rik lincRNA lincRNA MGP_129S1SvImJ_T0007963.1 MGP_129S1SvImJ_G0006507.1 mouse_genomes_project 4 127547633 127551476 - 2610028E06Rik lincRNA lincRNA MGP_129S1SvImJ_T0102514.1 MGP_129S1SvImJ_G0040348.1 mouse_genomes_project 4 41904180 41904483 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0068723.1 MGP_129S1SvImJ_G0028974.1 mouse_genomes_project 4 139482776 139486038 - MGP_129S1SvImJ_P0068723 C1qc protein_coding protein_coding MGP_129S1SvImJ_T0068724.1 MGP_129S1SvImJ_G0028974.1 mouse_genomes_project 4 139484623 139485849 - C1qc protein_coding processed_transcript MGP_129S1SvImJ_T0069441.1 MGP_129S1SvImJ_G0029158.1 mouse_genomes_project 4 154942356 154962443 + MGP_129S1SvImJ_P0069441 Tnfrsf9 protein_coding protein_coding MGP_129S1SvImJ_T0069443.1 MGP_129S1SvImJ_G0029158.1 mouse_genomes_project 4 154948035 154975022 + MGP_129S1SvImJ_P0069443 Tnfrsf9 protein_coding protein_coding MGP_129S1SvImJ_T0069444.1 MGP_129S1SvImJ_G0029158.1 mouse_genomes_project 4 154948070 154975022 + MGP_129S1SvImJ_P0069444 Tnfrsf9 protein_coding protein_coding MGP_129S1SvImJ_T0069445.1 MGP_129S1SvImJ_G0029158.1 mouse_genomes_project 4 154953179 154974151 + MGP_129S1SvImJ_P0069445 Tnfrsf9 protein_coding protein_coding MGP_129S1SvImJ_T0069446.1 MGP_129S1SvImJ_G0029158.1 mouse_genomes_project 4 154955849 154962434 + MGP_129S1SvImJ_P0069446 Tnfrsf9 protein_coding protein_coding MGP_129S1SvImJ_T0069447.1 MGP_129S1SvImJ_G0029158.1 mouse_genomes_project 4 154955930 154957980 + Tnfrsf9 protein_coding processed_transcript MGP_129S1SvImJ_T0069448.1 MGP_129S1SvImJ_G0029158.1 mouse_genomes_project 4 154955930 154975022 + MGP_129S1SvImJ_P0069448 Tnfrsf9 protein_coding protein_coding MGP_129S1SvImJ_T0069449.1 MGP_129S1SvImJ_G0029158.1 mouse_genomes_project 4 154957707 154973986 + MGP_129S1SvImJ_P0069449 Tnfrsf9 protein_coding protein_coding MGP_129S1SvImJ_T0069450.1 MGP_129S1SvImJ_G0029158.1 mouse_genomes_project 4 154957828 154963588 + MGP_129S1SvImJ_P0069450 Tnfrsf9 protein_coding protein_coding MGP_129S1SvImJ_T0069203.1 MGP_129S1SvImJ_G0029115.1 mouse_genomes_project 4 151727402 151744814 + MGP_129S1SvImJ_P0069203 Mthfr protein_coding protein_coding MGP_129S1SvImJ_T0069204.1 MGP_129S1SvImJ_G0029115.1 mouse_genomes_project 4 151727484 151733219 + MGP_129S1SvImJ_P0069204 Mthfr protein_coding protein_coding MGP_129S1SvImJ_T0069205.1 MGP_129S1SvImJ_G0029115.1 mouse_genomes_project 4 151729131 151732172 + Mthfr protein_coding retained_intron MGP_129S1SvImJ_T0069206.1 MGP_129S1SvImJ_G0029115.1 mouse_genomes_project 4 151729515 151748159 + MGP_129S1SvImJ_P0069206 Mthfr protein_coding protein_coding MGP_129S1SvImJ_T0069207.1 MGP_129S1SvImJ_G0029115.1 mouse_genomes_project 4 151729611 151748159 + MGP_129S1SvImJ_P0069207 Mthfr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069208.1 MGP_129S1SvImJ_G0029115.1 mouse_genomes_project 4 151729926 151732680 + Mthfr protein_coding retained_intron MGP_129S1SvImJ_T0069209.1 MGP_129S1SvImJ_G0029115.1 mouse_genomes_project 4 151741328 151748156 + MGP_129S1SvImJ_P0069209 Mthfr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0101097.1 MGP_129S1SvImJ_G0039164.1 mouse_genomes_project 4 25654724 25654853 + Gm25378 snoRNA snoRNA MGP_129S1SvImJ_T0004482.1 MGP_129S1SvImJ_G0003908.1 mouse_genomes_project 4 62386785 62400015 + Aknaos antisense antisense MGP_129S1SvImJ_T0068656.1 MGP_129S1SvImJ_G0028958.1 mouse_genomes_project 4 138502167 138522516 - MGP_129S1SvImJ_P0068656 Tceb3 protein_coding protein_coding MGP_129S1SvImJ_T0068130.1 MGP_129S1SvImJ_G0028845.1 mouse_genomes_project 4 132153340 132163666 - MGP_129S1SvImJ_P0068130 Tinagl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068131.1 MGP_129S1SvImJ_G0028845.1 mouse_genomes_project 4 132154488 132163666 - MGP_129S1SvImJ_P0068131 Tinagl1 protein_coding protein_coding MGP_129S1SvImJ_T0068132.1 MGP_129S1SvImJ_G0028845.1 mouse_genomes_project 4 132154490 132155498 - Tinagl1 protein_coding retained_intron MGP_129S1SvImJ_T0068133.1 MGP_129S1SvImJ_G0028845.1 mouse_genomes_project 4 132154490 132163656 - MGP_129S1SvImJ_P0068133 Tinagl1 protein_coding protein_coding MGP_129S1SvImJ_T0068134.1 MGP_129S1SvImJ_G0028845.1 mouse_genomes_project 4 132154605 132163986 - MGP_129S1SvImJ_P0068134 Tinagl1 protein_coding protein_coding MGP_129S1SvImJ_T0068135.1 MGP_129S1SvImJ_G0028845.1 mouse_genomes_project 4 132155863 132158341 - Tinagl1 protein_coding retained_intron MGP_129S1SvImJ_T0068136.1 MGP_129S1SvImJ_G0028845.1 mouse_genomes_project 4 132157969 132163555 - MGP_129S1SvImJ_P0068136 Tinagl1 protein_coding protein_coding MGP_129S1SvImJ_T0068137.1 MGP_129S1SvImJ_G0028845.1 mouse_genomes_project 4 132160263 132163656 - Tinagl1 protein_coding processed_transcript MGP_129S1SvImJ_T0068138.1 MGP_129S1SvImJ_G0028845.1 mouse_genomes_project 4 132162573 132163684 - Tinagl1 protein_coding retained_intron MGP_129S1SvImJ_T0007844.1 MGP_129S1SvImJ_G0006416.1 mouse_genomes_project 4 43145977 43153793 + lincRNA lincRNA MGP_129S1SvImJ_T0014462.1 MGP_129S1SvImJ_G0012551.1 mouse_genomes_project 4 19337864 19338370 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018066.1 MGP_129S1SvImJ_G0015536.1 mouse_genomes_project 4 22080918 22086741 - C230012O17Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018067.1 MGP_129S1SvImJ_G0015536.1 mouse_genomes_project 4 22082454 22087208 - C230012O17Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018068.1 MGP_129S1SvImJ_G0015536.1 mouse_genomes_project 4 22086496 22087574 - C230012O17Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0069082.1 MGP_129S1SvImJ_G0029062.1 mouse_genomes_project 4 145004802 145142190 - MGP_129S1SvImJ_P0069082 Fhad1 protein_coding protein_coding MGP_129S1SvImJ_T0069083.1 MGP_129S1SvImJ_G0029062.1 mouse_genomes_project 4 145005215 145138791 - MGP_129S1SvImJ_P0069083 Fhad1 protein_coding protein_coding MGP_129S1SvImJ_T0069084.1 MGP_129S1SvImJ_G0029062.1 mouse_genomes_project 4 145005215 145138791 - MGP_129S1SvImJ_P0069084 Fhad1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0069085.1 MGP_129S1SvImJ_G0029062.1 mouse_genomes_project 4 145033258 145039397 - Fhad1 protein_coding processed_transcript MGP_129S1SvImJ_T0069086.1 MGP_129S1SvImJ_G0029062.1 mouse_genomes_project 4 145033258 145050116 - MGP_129S1SvImJ_P0069086 Fhad1 protein_coding protein_coding MGP_129S1SvImJ_T0069087.1 MGP_129S1SvImJ_G0029062.1 mouse_genomes_project 4 145045389 145074416 - Fhad1 protein_coding processed_transcript MGP_129S1SvImJ_T0069088.1 MGP_129S1SvImJ_G0029062.1 mouse_genomes_project 4 145049809 145076538 - Fhad1 protein_coding processed_transcript MGP_129S1SvImJ_T0069089.1 MGP_129S1SvImJ_G0029062.1 mouse_genomes_project 4 145085170 145142205 - Fhad1 protein_coding retained_intron MGP_129S1SvImJ_T0069090.1 MGP_129S1SvImJ_G0029062.1 mouse_genomes_project 4 145140900 145142162 - Fhad1 protein_coding processed_transcript MGP_129S1SvImJ_T0064800.1 MGP_129S1SvImJ_G0028079.1 mouse_genomes_project 4 16289936 16529869 + MGP_129S1SvImJ_P0064800 Cngb3 protein_coding protein_coding MGP_129S1SvImJ_T0066133.1 MGP_129S1SvImJ_G0028399.1 mouse_genomes_project 4 82367759 82431373 - MGP_129S1SvImJ_P0066133 Zdhhc21 protein_coding protein_coding MGP_129S1SvImJ_T0066134.1 MGP_129S1SvImJ_G0028399.1 mouse_genomes_project 4 82373048 82431261 - MGP_129S1SvImJ_P0066134 Zdhhc21 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066135.1 MGP_129S1SvImJ_G0028399.1 mouse_genomes_project 4 82375210 82431658 - MGP_129S1SvImJ_P0066135 Zdhhc21 protein_coding protein_coding MGP_129S1SvImJ_T0066136.1 MGP_129S1SvImJ_G0028399.1 mouse_genomes_project 4 82408635 82422531 - MGP_129S1SvImJ_P0066136 Zdhhc21 protein_coding protein_coding MGP_129S1SvImJ_T0066137.1 MGP_129S1SvImJ_G0028399.1 mouse_genomes_project 4 82410692 82431254 - Zdhhc21 protein_coding retained_intron MGP_129S1SvImJ_T0066138.1 MGP_129S1SvImJ_G0028399.1 mouse_genomes_project 4 82419329 82431273 - MGP_129S1SvImJ_P0066138 Zdhhc21 protein_coding protein_coding MGP_129S1SvImJ_T0066830.1 MGP_129S1SvImJ_G0028552.1 mouse_genomes_project 4 109053804 109067151 + MGP_129S1SvImJ_P0066830 Coa7 protein_coding protein_coding MGP_129S1SvImJ_T0066831.1 MGP_129S1SvImJ_G0028552.1 mouse_genomes_project 4 109053817 109064058 + Coa7 protein_coding processed_transcript MGP_129S1SvImJ_T0066832.1 MGP_129S1SvImJ_G0028552.1 mouse_genomes_project 4 109053820 109064290 + Coa7 protein_coding processed_transcript MGP_129S1SvImJ_T0066833.1 MGP_129S1SvImJ_G0028552.1 mouse_genomes_project 4 109053842 109063785 + Coa7 protein_coding processed_transcript MGP_129S1SvImJ_T0066834.1 MGP_129S1SvImJ_G0028552.1 mouse_genomes_project 4 109053853 109058303 + Coa7 protein_coding processed_transcript MGP_129S1SvImJ_T0004481.1 MGP_129S1SvImJ_G0003907.1 mouse_genomes_project 4 61617284 61623388 - Gm11209 antisense antisense MGP_129S1SvImJ_T0004521.1 MGP_129S1SvImJ_G0003933.1 mouse_genomes_project 4 110180231 110180647 - Ttc39aos1 antisense antisense MGP_129S1SvImJ_T0004522.1 MGP_129S1SvImJ_G0003933.1 mouse_genomes_project 4 110180246 110182597 - Ttc39aos1 antisense antisense MGP_129S1SvImJ_T0004620.1 MGP_129S1SvImJ_G0004010.1 mouse_genomes_project 4 154849216 154880024 - 1700045H11Rik antisense antisense MGP_129S1SvImJ_T0014587.1 MGP_129S1SvImJ_G0012676.1 mouse_genomes_project 4 56252428 56254417 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067818.1 MGP_129S1SvImJ_G0028783.1 mouse_genomes_project 4 128247091 128292411 + MGP_129S1SvImJ_P0067818 Clspn protein_coding protein_coding MGP_129S1SvImJ_T0067819.1 MGP_129S1SvImJ_G0028783.1 mouse_genomes_project 4 128247151 128251857 + MGP_129S1SvImJ_P0067819 Clspn protein_coding protein_coding MGP_129S1SvImJ_T0067820.1 MGP_129S1SvImJ_G0028783.1 mouse_genomes_project 4 128247161 128255371 + Clspn protein_coding processed_transcript MGP_129S1SvImJ_T0067821.1 MGP_129S1SvImJ_G0028783.1 mouse_genomes_project 4 128251848 128257807 + MGP_129S1SvImJ_P0067821 Clspn protein_coding protein_coding MGP_129S1SvImJ_T0067822.1 MGP_129S1SvImJ_G0028783.1 mouse_genomes_project 4 128258088 128269282 + MGP_129S1SvImJ_P0067822 Clspn protein_coding protein_coding MGP_129S1SvImJ_T0067823.1 MGP_129S1SvImJ_G0028783.1 mouse_genomes_project 4 128263948 128266782 + Clspn protein_coding processed_transcript MGP_129S1SvImJ_T0067824.1 MGP_129S1SvImJ_G0028783.1 mouse_genomes_project 4 128272852 128287842 + Clspn protein_coding processed_transcript MGP_129S1SvImJ_T0069916.1 MGP_129S1SvImJ_G0029245.1 mouse_genomes_project 4 160404371 160420160 - MGP_129S1SvImJ_P0069916 Ttll10 protein_coding protein_coding MGP_129S1SvImJ_T0069917.1 MGP_129S1SvImJ_G0029245.1 mouse_genomes_project 4 160404444 160430697 - MGP_129S1SvImJ_P0069917 Ttll10 protein_coding protein_coding MGP_129S1SvImJ_T0069918.1 MGP_129S1SvImJ_G0029245.1 mouse_genomes_project 4 160404831 160419807 - MGP_129S1SvImJ_P0069918 Ttll10 protein_coding protein_coding MGP_129S1SvImJ_T0069919.1 MGP_129S1SvImJ_G0029245.1 mouse_genomes_project 4 160405336 160413332 - Ttll10 protein_coding processed_transcript MGP_129S1SvImJ_T0069920.1 MGP_129S1SvImJ_G0029245.1 mouse_genomes_project 4 160411674 160430624 - Ttll10 protein_coding retained_intron MGP_129S1SvImJ_T0069921.1 MGP_129S1SvImJ_G0029245.1 mouse_genomes_project 4 160412407 160414192 - Ttll10 protein_coding processed_transcript MGP_129S1SvImJ_T0069922.1 MGP_129S1SvImJ_G0029245.1 mouse_genomes_project 4 160412417 160417317 - Ttll10 protein_coding processed_transcript MGP_129S1SvImJ_T0069923.1 MGP_129S1SvImJ_G0029245.1 mouse_genomes_project 4 160416131 160417285 - Ttll10 protein_coding retained_intron MGP_129S1SvImJ_T0064730.1 MGP_129S1SvImJ_G0028057.1 mouse_genomes_project 4 8442008 8508009 + MGP_129S1SvImJ_P0064730 Cdh17 protein_coding protein_coding MGP_129S1SvImJ_T0064731.1 MGP_129S1SvImJ_G0028057.1 mouse_genomes_project 4 8442054 8500415 + MGP_129S1SvImJ_P0064731 Cdh17 protein_coding protein_coding MGP_129S1SvImJ_T0066849.1 MGP_129S1SvImJ_G0028556.1 mouse_genomes_project 4 109311496 109315337 - Prpf38a protein_coding processed_transcript MGP_129S1SvImJ_T0066850.1 MGP_129S1SvImJ_G0028556.1 mouse_genomes_project 4 109313194 109329486 - MGP_129S1SvImJ_P0066850 Prpf38a protein_coding protein_coding MGP_129S1SvImJ_T0066851.1 MGP_129S1SvImJ_G0028556.1 mouse_genomes_project 4 109313197 109323726 - Prpf38a protein_coding processed_transcript MGP_129S1SvImJ_T0004581.1 MGP_129S1SvImJ_G0003981.1 mouse_genomes_project 4 141995943 142001194 - Gm16287 antisense antisense MGP_129S1SvImJ_T0018085.1 MGP_129S1SvImJ_G0015549.1 mouse_genomes_project 4 63021972 63192704 + 8030451A03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018086.1 MGP_129S1SvImJ_G0015549.1 mouse_genomes_project 4 63022061 63091961 + 8030451A03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018087.1 MGP_129S1SvImJ_G0015549.1 mouse_genomes_project 4 63022078 63025468 + 8030451A03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018088.1 MGP_129S1SvImJ_G0015549.1 mouse_genomes_project 4 63191332 63191725 + 8030451A03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0004559.1 MGP_129S1SvImJ_G0003964.1 mouse_genomes_project 4 132005453 132028873 - Gm12963 antisense antisense MGP_129S1SvImJ_T0004560.1 MGP_129S1SvImJ_G0003964.1 mouse_genomes_project 4 132008060 132028873 - Gm12963 antisense antisense MGP_129S1SvImJ_T0004561.1 MGP_129S1SvImJ_G0003964.1 mouse_genomes_project 4 132008064 132009671 - Gm12963 antisense antisense MGP_129S1SvImJ_T0066256.1 MGP_129S1SvImJ_G0028418.1 mouse_genomes_project 4 87602482 87875076 - MGP_129S1SvImJ_P0066256 Mllt3 protein_coding protein_coding MGP_129S1SvImJ_T0066257.1 MGP_129S1SvImJ_G0028418.1 mouse_genomes_project 4 87606250 87639503 - MGP_129S1SvImJ_P0066257 Mllt3 protein_coding protein_coding MGP_129S1SvImJ_T0066258.1 MGP_129S1SvImJ_G0028418.1 mouse_genomes_project 4 87606287 87639474 - MGP_129S1SvImJ_P0066258 Mllt3 protein_coding protein_coding MGP_129S1SvImJ_T0066259.1 MGP_129S1SvImJ_G0028418.1 mouse_genomes_project 4 87625124 87875262 - Mllt3 protein_coding processed_transcript MGP_129S1SvImJ_T0066260.1 MGP_129S1SvImJ_G0028418.1 mouse_genomes_project 4 87666441 87709212 - Mllt3 protein_coding processed_transcript MGP_129S1SvImJ_T0066261.1 MGP_129S1SvImJ_G0028418.1 mouse_genomes_project 4 87671079 87872770 - Mllt3 protein_coding retained_intron MGP_129S1SvImJ_T0066262.1 MGP_129S1SvImJ_G0028418.1 mouse_genomes_project 4 87674744 87872770 - MGP_129S1SvImJ_P0066262 Mllt3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0001428.1 MGP_129S1SvImJ_G0001351.1 mouse_genomes_project 4 19473248 19476882 + TEC TEC MGP_129S1SvImJ_T0018135.1 MGP_129S1SvImJ_G0015579.1 mouse_genomes_project 4 134493758 134499553 - Snhg3 processed_transcript processed_transcript MGP_129S1SvImJ_T0018136.1 MGP_129S1SvImJ_G0015579.1 mouse_genomes_project 4 134497669 134499576 - Snhg3 processed_transcript processed_transcript MGP_129S1SvImJ_T0018137.1 MGP_129S1SvImJ_G0015579.1 mouse_genomes_project 4 134497670 134499523 - Snhg3 processed_transcript processed_transcript MGP_129S1SvImJ_T0018138.1 MGP_129S1SvImJ_G0015579.1 mouse_genomes_project 4 134497670 134498823 - Snhg3 processed_transcript processed_transcript MGP_129S1SvImJ_T0018139.1 MGP_129S1SvImJ_G0015579.1 mouse_genomes_project 4 134497740 134499226 - Snhg3 processed_transcript processed_transcript MGP_129S1SvImJ_T0064604.1 MGP_129S1SvImJ_G0028033.1 mouse_genomes_project 4 2699721 2731054 + MGP_129S1SvImJ_P0064604 Ubxn2b protein_coding protein_coding MGP_129S1SvImJ_T0010590.1 MGP_129S1SvImJ_G0008706.1 mouse_genomes_project 4 13018060 13018172 - Gm22690 miRNA miRNA MGP_129S1SvImJ_T0067054.1 MGP_129S1SvImJ_G0028602.1 mouse_genomes_project 4 116329723 116401025 + MGP_129S1SvImJ_P0067054 Cyp4a10 protein_coding protein_coding MGP_129S1SvImJ_T0067055.1 MGP_129S1SvImJ_G0028602.1 mouse_genomes_project 4 116329747 116401022 + MGP_129S1SvImJ_P0067055 Cyp4a10 protein_coding protein_coding MGP_129S1SvImJ_T0014743.1 MGP_129S1SvImJ_G0012832.1 mouse_genomes_project 4 116542154 116543215 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068022.1 MGP_129S1SvImJ_G0028829.1 mouse_genomes_project 4 131513692 131514335 - Fam167b protein_coding processed_transcript MGP_129S1SvImJ_T0068023.1 MGP_129S1SvImJ_G0028829.1 mouse_genomes_project 4 131513692 131515427 - MGP_129S1SvImJ_P0068023 Fam167b protein_coding protein_coding MGP_129S1SvImJ_T0065088.1 MGP_129S1SvImJ_G0028152.1 mouse_genomes_project 4 38887987 38944353 + MGP_129S1SvImJ_P0065088 Nfx1 protein_coding protein_coding MGP_129S1SvImJ_T0065089.1 MGP_129S1SvImJ_G0028152.1 mouse_genomes_project 4 38887987 38930977 + MGP_129S1SvImJ_P0065089 Nfx1 protein_coding protein_coding MGP_129S1SvImJ_T0065090.1 MGP_129S1SvImJ_G0028152.1 mouse_genomes_project 4 38887987 38932240 + MGP_129S1SvImJ_P0065090 Nfx1 protein_coding protein_coding MGP_129S1SvImJ_T0065091.1 MGP_129S1SvImJ_G0028152.1 mouse_genomes_project 4 38919569 38930538 + Nfx1 protein_coding processed_transcript MGP_129S1SvImJ_T0065092.1 MGP_129S1SvImJ_G0028152.1 mouse_genomes_project 4 38927575 38940678 + Nfx1 protein_coding processed_transcript MGP_129S1SvImJ_T0065093.1 MGP_129S1SvImJ_G0028152.1 mouse_genomes_project 4 38939720 38943538 + Nfx1 protein_coding processed_transcript MGP_129S1SvImJ_T0065094.1 MGP_129S1SvImJ_G0028152.1 mouse_genomes_project 4 38941563 38942900 + Nfx1 protein_coding processed_transcript MGP_129S1SvImJ_T0069146.1 MGP_129S1SvImJ_G0029098.1 mouse_genomes_project 4 148069506 148089191 - MGP_129S1SvImJ_P0069146 Gm13178 protein_coding protein_coding MGP_129S1SvImJ_T0065354.1 MGP_129S1SvImJ_G0028209.1 mouse_genomes_project 4 41613847 41614940 - MGP_129S1SvImJ_P0065354 Arhgef39 protein_coding protein_coding MGP_129S1SvImJ_T0065355.1 MGP_129S1SvImJ_G0028209.1 mouse_genomes_project 4 41613847 41617401 - MGP_129S1SvImJ_P0065355 Arhgef39 protein_coding protein_coding MGP_129S1SvImJ_T0065356.1 MGP_129S1SvImJ_G0028209.1 mouse_genomes_project 4 41613851 41617325 - Arhgef39 protein_coding processed_transcript MGP_129S1SvImJ_T0065357.1 MGP_129S1SvImJ_G0028209.1 mouse_genomes_project 4 41613853 41614919 - Arhgef39 protein_coding processed_transcript MGP_129S1SvImJ_T0065358.1 MGP_129S1SvImJ_G0028209.1 mouse_genomes_project 4 41614229 41617367 - Arhgef39 protein_coding processed_transcript MGP_129S1SvImJ_T0065359.1 MGP_129S1SvImJ_G0028209.1 mouse_genomes_project 4 41614526 41617314 - MGP_129S1SvImJ_P0065359 Arhgef39 protein_coding protein_coding MGP_129S1SvImJ_T0065360.1 MGP_129S1SvImJ_G0028209.1 mouse_genomes_project 4 41614925 41616821 - Arhgef39 protein_coding processed_transcript MGP_129S1SvImJ_T0065361.1 MGP_129S1SvImJ_G0028209.1 mouse_genomes_project 4 41614966 41616781 - Arhgef39 protein_coding processed_transcript MGP_129S1SvImJ_T0065362.1 MGP_129S1SvImJ_G0028209.1 mouse_genomes_project 4 41615437 41617317 - Arhgef39 protein_coding processed_transcript MGP_129S1SvImJ_T0065363.1 MGP_129S1SvImJ_G0028209.1 mouse_genomes_project 4 41616852 41617367 - Arhgef39 protein_coding processed_transcript MGP_129S1SvImJ_T0067455.1 MGP_129S1SvImJ_G0028690.1 mouse_genomes_project 4 120379229 120385421 + MGP_129S1SvImJ_P0067455 Svbp protein_coding protein_coding MGP_129S1SvImJ_T0067456.1 MGP_129S1SvImJ_G0028690.1 mouse_genomes_project 4 120379330 120385421 + MGP_129S1SvImJ_P0067456 Svbp protein_coding protein_coding MGP_129S1SvImJ_T0067457.1 MGP_129S1SvImJ_G0028690.1 mouse_genomes_project 4 120379419 120385421 + MGP_129S1SvImJ_P0067457 Svbp protein_coding protein_coding MGP_129S1SvImJ_T0007838.1 MGP_129S1SvImJ_G0006410.1 mouse_genomes_project 4 38348700 38394513 - 4933428C19Rik lincRNA lincRNA MGP_129S1SvImJ_T0007880.1 MGP_129S1SvImJ_G0006445.1 mouse_genomes_project 4 67168639 67283374 + lincRNA lincRNA MGP_129S1SvImJ_T0014487.1 MGP_129S1SvImJ_G0012576.1 mouse_genomes_project 4 25641099 25642106 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014611.1 MGP_129S1SvImJ_G0012700.1 mouse_genomes_project 4 69235216 69236255 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068585.1 MGP_129S1SvImJ_G0028942.1 mouse_genomes_project 4 137804856 137832762 - MGP_129S1SvImJ_P0068585 Ncmap protein_coding protein_coding MGP_129S1SvImJ_T0068586.1 MGP_129S1SvImJ_G0028942.1 mouse_genomes_project 4 137804856 137820203 - MGP_129S1SvImJ_P0068586 Ncmap protein_coding protein_coding MGP_129S1SvImJ_T0068587.1 MGP_129S1SvImJ_G0028942.1 mouse_genomes_project 4 137804856 137832731 - MGP_129S1SvImJ_P0068587 Ncmap protein_coding protein_coding MGP_129S1SvImJ_T0068588.1 MGP_129S1SvImJ_G0028942.1 mouse_genomes_project 4 137804857 137820220 - MGP_129S1SvImJ_P0068588 Ncmap protein_coding protein_coding MGP_129S1SvImJ_T0068589.1 MGP_129S1SvImJ_G0028942.1 mouse_genomes_project 4 137805515 137820193 - MGP_129S1SvImJ_P0068589 Ncmap protein_coding protein_coding MGP_129S1SvImJ_T0068590.1 MGP_129S1SvImJ_G0028942.1 mouse_genomes_project 4 137805805 137809863 - Ncmap protein_coding processed_transcript MGP_129S1SvImJ_T0068591.1 MGP_129S1SvImJ_G0028942.1 mouse_genomes_project 4 137805940 137820220 - MGP_129S1SvImJ_P0068591 Ncmap protein_coding protein_coding MGP_129S1SvImJ_T0068592.1 MGP_129S1SvImJ_G0028942.1 mouse_genomes_project 4 137807215 137832768 - MGP_129S1SvImJ_P0068592 Ncmap protein_coding protein_coding MGP_129S1SvImJ_T0014685.1 MGP_129S1SvImJ_G0012774.1 mouse_genomes_project 4 97676676 97677343 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066341.1 MGP_129S1SvImJ_G0028454.1 mouse_genomes_project 4 94956329 94972528 - MGP_129S1SvImJ_P0066341 Eqtn protein_coding protein_coding MGP_129S1SvImJ_T0066342.1 MGP_129S1SvImJ_G0028454.1 mouse_genomes_project 4 94956493 94972479 - MGP_129S1SvImJ_P0066342 Eqtn protein_coding protein_coding MGP_129S1SvImJ_T0066406.1 MGP_129S1SvImJ_G0028470.1 mouse_genomes_project 4 97899321 98138830 + MGP_129S1SvImJ_P0066406 Nfia protein_coding protein_coding MGP_129S1SvImJ_T0066407.1 MGP_129S1SvImJ_G0028470.1 mouse_genomes_project 4 97906592 98262539 + MGP_129S1SvImJ_P0066407 Nfia protein_coding protein_coding MGP_129S1SvImJ_T0066408.1 MGP_129S1SvImJ_G0028470.1 mouse_genomes_project 4 97906610 98262542 + MGP_129S1SvImJ_P0066408 Nfia protein_coding protein_coding MGP_129S1SvImJ_T0066409.1 MGP_129S1SvImJ_G0028470.1 mouse_genomes_project 4 97906787 98262539 + MGP_129S1SvImJ_P0066409 Nfia protein_coding protein_coding MGP_129S1SvImJ_T0066410.1 MGP_129S1SvImJ_G0028470.1 mouse_genomes_project 4 97906803 98262539 + MGP_129S1SvImJ_P0066410 Nfia protein_coding protein_coding MGP_129S1SvImJ_T0066411.1 MGP_129S1SvImJ_G0028470.1 mouse_genomes_project 4 97906818 98262539 + MGP_129S1SvImJ_P0066411 Nfia protein_coding protein_coding MGP_129S1SvImJ_T0066412.1 MGP_129S1SvImJ_G0028470.1 mouse_genomes_project 4 98013639 98203691 + MGP_129S1SvImJ_P0066412 Nfia protein_coding protein_coding MGP_129S1SvImJ_T0066413.1 MGP_129S1SvImJ_G0028470.1 mouse_genomes_project 4 98045885 98179991 + Nfia protein_coding processed_transcript MGP_129S1SvImJ_T0101086.1 MGP_129S1SvImJ_G0039153.1 mouse_genomes_project 4 347071 347208 - Gm24125 snoRNA snoRNA MGP_129S1SvImJ_T0101146.1 MGP_129S1SvImJ_G0039213.1 mouse_genomes_project 4 118116979 118117050 - Snord38a snoRNA snoRNA MGP_129S1SvImJ_T0010594.1 MGP_129S1SvImJ_G0008710.1 mouse_genomes_project 4 28125653 28125762 - Gm22831 miRNA miRNA MGP_129S1SvImJ_T0067093.1 MGP_129S1SvImJ_G0028611.1 mouse_genomes_project 4 116728687 116732254 + MGP_129S1SvImJ_P0067093 Kncn protein_coding protein_coding MGP_129S1SvImJ_T0067094.1 MGP_129S1SvImJ_G0028611.1 mouse_genomes_project 4 116730154 116733817 + Kncn protein_coding processed_transcript MGP_129S1SvImJ_T0067939.1 MGP_129S1SvImJ_G0028812.1 mouse_genomes_project 4 130962987 130969051 + MGP_129S1SvImJ_P0067939 Tmem54 protein_coding protein_coding MGP_129S1SvImJ_T0067940.1 MGP_129S1SvImJ_G0028812.1 mouse_genomes_project 4 130963013 130969051 + MGP_129S1SvImJ_P0067940 Tmem54 protein_coding protein_coding MGP_129S1SvImJ_T0067941.1 MGP_129S1SvImJ_G0028812.1 mouse_genomes_project 4 130963040 130968942 + MGP_129S1SvImJ_P0067941 Tmem54 protein_coding protein_coding MGP_129S1SvImJ_T0067942.1 MGP_129S1SvImJ_G0028812.1 mouse_genomes_project 4 130964308 130967968 + MGP_129S1SvImJ_P0067942 Tmem54 protein_coding protein_coding MGP_129S1SvImJ_T0064569.1 MGP_129S1SvImJ_G0028026.1 mouse_genomes_project 4 390732 428228 - MGP_129S1SvImJ_P0064569 Plag1 protein_coding protein_coding MGP_129S1SvImJ_T0064570.1 MGP_129S1SvImJ_G0028026.1 mouse_genomes_project 4 394626 428251 - MGP_129S1SvImJ_P0064570 Plag1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064571.1 MGP_129S1SvImJ_G0028026.1 mouse_genomes_project 4 395285 428269 - MGP_129S1SvImJ_P0064571 Plag1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064572.1 MGP_129S1SvImJ_G0028026.1 mouse_genomes_project 4 401593 428239 - Plag1 protein_coding retained_intron MGP_129S1SvImJ_T0066773.1 MGP_129S1SvImJ_G0028543.1 mouse_genomes_project 4 108582801 108590448 + MGP_129S1SvImJ_P0066773 Magoh protein_coding protein_coding MGP_129S1SvImJ_T0066774.1 MGP_129S1SvImJ_G0028543.1 mouse_genomes_project 4 108586038 108590411 + Magoh protein_coding processed_transcript MGP_129S1SvImJ_T0014653.1 MGP_129S1SvImJ_G0012742.1 mouse_genomes_project 4 84560906 84562477 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067623.1 MGP_129S1SvImJ_G0028734.1 mouse_genomes_project 4 124534362 124536097 + MGP_129S1SvImJ_P0067623 protein_coding protein_coding MGP_129S1SvImJ_T0068730.1 MGP_129S1SvImJ_G0028978.1 mouse_genomes_project 4 139890233 139912271 + MGP_129S1SvImJ_P0068730 Wnt4 protein_coding protein_coding MGP_129S1SvImJ_T0067230.1 MGP_129S1SvImJ_G0028638.1 mouse_genomes_project 4 117820403 117936379 + MGP_129S1SvImJ_P0067230 Zswim5 protein_coding protein_coding MGP_129S1SvImJ_T0010620.1 MGP_129S1SvImJ_G0008736.1 mouse_genomes_project 4 88819085 88819191 - Mir31 miRNA miRNA MGP_129S1SvImJ_T0014718.1 MGP_129S1SvImJ_G0012807.1 mouse_genomes_project 4 107418147 107418361 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064876.1 MGP_129S1SvImJ_G0028099.1 mouse_genomes_project 4 21723910 21919717 - MGP_129S1SvImJ_P0064876 Klhl32 protein_coding protein_coding MGP_129S1SvImJ_T0064877.1 MGP_129S1SvImJ_G0028099.1 mouse_genomes_project 4 21723910 21968779 - MGP_129S1SvImJ_P0064877 Klhl32 protein_coding protein_coding MGP_129S1SvImJ_T0064878.1 MGP_129S1SvImJ_G0028099.1 mouse_genomes_project 4 21727274 21864568 - MGP_129S1SvImJ_P0064878 Klhl32 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064879.1 MGP_129S1SvImJ_G0028099.1 mouse_genomes_project 4 21727363 21968586 - MGP_129S1SvImJ_P0064879 Klhl32 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064880.1 MGP_129S1SvImJ_G0028099.1 mouse_genomes_project 4 21728581 21968741 - MGP_129S1SvImJ_P0064880 Klhl32 protein_coding protein_coding MGP_129S1SvImJ_T0064881.1 MGP_129S1SvImJ_G0028099.1 mouse_genomes_project 4 21763630 21968586 - Klhl32 protein_coding retained_intron MGP_129S1SvImJ_T0064882.1 MGP_129S1SvImJ_G0028099.1 mouse_genomes_project 4 21764172 21792413 - Klhl32 protein_coding processed_transcript MGP_129S1SvImJ_T0014465.1 MGP_129S1SvImJ_G0012554.1 mouse_genomes_project 4 19774359 19775061 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0068434.1 MGP_129S1SvImJ_G0028910.1 mouse_genomes_project 4 136393655 136425353 + MGP_129S1SvImJ_P0068434 Aim1l protein_coding unknown_likely_coding MGP_129S1SvImJ_T0068435.1 MGP_129S1SvImJ_G0028910.1 mouse_genomes_project 4 136398680 136405486 + MGP_129S1SvImJ_P0068435 Aim1l protein_coding protein_coding MGP_129S1SvImJ_T0068436.1 MGP_129S1SvImJ_G0028910.1 mouse_genomes_project 4 136401162 136425450 + MGP_129S1SvImJ_P0068436 Aim1l protein_coding protein_coding MGP_129S1SvImJ_T0068437.1 MGP_129S1SvImJ_G0028910.1 mouse_genomes_project 4 136411612 136415461 + Aim1l protein_coding processed_transcript MGP_129S1SvImJ_T0068438.1 MGP_129S1SvImJ_G0028910.1 mouse_genomes_project 4 136411693 136420496 + MGP_129S1SvImJ_P0068438 Aim1l protein_coding protein_coding MGP_129S1SvImJ_T0068439.1 MGP_129S1SvImJ_G0028910.1 mouse_genomes_project 4 136415086 136424045 + Aim1l protein_coding retained_intron MGP_129S1SvImJ_T0068440.1 MGP_129S1SvImJ_G0028910.1 mouse_genomes_project 4 136415086 136425447 + Aim1l protein_coding retained_intron MGP_129S1SvImJ_T0068441.1 MGP_129S1SvImJ_G0028910.1 mouse_genomes_project 4 136415089 136422459 + Aim1l protein_coding retained_intron MGP_129S1SvImJ_T0068442.1 MGP_129S1SvImJ_G0028910.1 mouse_genomes_project 4 136415124 136422023 + Aim1l protein_coding retained_intron MGP_129S1SvImJ_T0068443.1 MGP_129S1SvImJ_G0028910.1 mouse_genomes_project 4 136415210 136415644 + Aim1l protein_coding retained_intron MGP_129S1SvImJ_T0068445.1 MGP_129S1SvImJ_G0028910.1 mouse_genomes_project 4 136423763 136425332 + Aim1l protein_coding retained_intron MGP_129S1SvImJ_T0068446.1 MGP_129S1SvImJ_G0028910.1 mouse_genomes_project 4 136424098 136425442 + Aim1l protein_coding processed_transcript MGP_129S1SvImJ_T0008024.1 MGP_129S1SvImJ_G0006550.1 mouse_genomes_project 4 143621694 143626030 + lincRNA lincRNA MGP_129S1SvImJ_T0014659.1 MGP_129S1SvImJ_G0012748.1 mouse_genomes_project 4 87885783 87886021 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0067684.1 MGP_129S1SvImJ_G0028750.1 mouse_genomes_project 4 126216931 126236220 - MGP_129S1SvImJ_P0067684 Utp11l protein_coding protein_coding MGP_129S1SvImJ_T0067685.1 MGP_129S1SvImJ_G0028750.1 mouse_genomes_project 4 126217580 126236154 - Utp11l protein_coding processed_transcript MGP_129S1SvImJ_T0014637.1 MGP_129S1SvImJ_G0012726.1 mouse_genomes_project 4 77671281 77672207 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066436.1 MGP_129S1SvImJ_G0028474.1 mouse_genomes_project 4 98927599 98995037 - MGP_129S1SvImJ_P0066436 Kank4 protein_coding protein_coding MGP_129S1SvImJ_T0066437.1 MGP_129S1SvImJ_G0028474.1 mouse_genomes_project 4 98929006 98945749 - Kank4 protein_coding processed_transcript MGP_129S1SvImJ_T0064799.1 MGP_129S1SvImJ_G0028078.1 mouse_genomes_project 4 15860687 16147734 - MGP_129S1SvImJ_P0064799 Cnbd1 protein_coding protein_coding MGP_129S1SvImJ_T0014429.1 MGP_129S1SvImJ_G0012518.1 mouse_genomes_project 4 10955513 10956374 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069065.1 MGP_129S1SvImJ_G0029057.1 mouse_genomes_project 4 144864209 144895217 - MGP_129S1SvImJ_P0069065 Dnajc16 protein_coding protein_coding MGP_129S1SvImJ_T0069066.1 MGP_129S1SvImJ_G0029057.1 mouse_genomes_project 4 144874561 144879033 - Dnajc16 protein_coding processed_transcript MGP_129S1SvImJ_T0069067.1 MGP_129S1SvImJ_G0029057.1 mouse_genomes_project 4 144887392 144895257 - MGP_129S1SvImJ_P0069067 Dnajc16 protein_coding protein_coding MGP_129S1SvImJ_T0102547.1 MGP_129S1SvImJ_G0040380.1 mouse_genomes_project 4 124155747 124171339 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0066894.1 MGP_129S1SvImJ_G0028567.1 mouse_genomes_project 4 109825520 109887258 - MGP_129S1SvImJ_P0066894 Osbpl9 protein_coding protein_coding MGP_129S1SvImJ_T0066895.1 MGP_129S1SvImJ_G0028567.1 mouse_genomes_project 4 109825990 109974196 - MGP_129S1SvImJ_P0066895 Osbpl9 protein_coding protein_coding MGP_129S1SvImJ_T0066896.1 MGP_129S1SvImJ_G0028567.1 mouse_genomes_project 4 109826025 109887272 - MGP_129S1SvImJ_P0066896 Osbpl9 protein_coding protein_coding MGP_129S1SvImJ_T0066897.1 MGP_129S1SvImJ_G0028567.1 mouse_genomes_project 4 109826030 109974234 - MGP_129S1SvImJ_P0066897 Osbpl9 protein_coding protein_coding MGP_129S1SvImJ_T0066898.1 MGP_129S1SvImJ_G0028567.1 mouse_genomes_project 4 109826030 109974196 - MGP_129S1SvImJ_P0066898 Osbpl9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0066899.1 MGP_129S1SvImJ_G0028567.1 mouse_genomes_project 4 109826030 109974179 - MGP_129S1SvImJ_P0066899 Osbpl9 protein_coding protein_coding MGP_129S1SvImJ_T0066900.1 MGP_129S1SvImJ_G0028567.1 mouse_genomes_project 4 109826349 109853165 - Osbpl9 protein_coding processed_transcript MGP_129S1SvImJ_T0066901.1 MGP_129S1SvImJ_G0028567.1 mouse_genomes_project 4 109826454 109974234 - MGP_129S1SvImJ_P0066901 Osbpl9 protein_coding protein_coding MGP_129S1SvImJ_T0066902.1 MGP_129S1SvImJ_G0028567.1 mouse_genomes_project 4 109826462 109928236 - MGP_129S1SvImJ_P0066902 Osbpl9 protein_coding protein_coding MGP_129S1SvImJ_T0066903.1 MGP_129S1SvImJ_G0028567.1 mouse_genomes_project 4 109826633 109887157 - MGP_129S1SvImJ_P0066903 Osbpl9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0066904.1 MGP_129S1SvImJ_G0028567.1 mouse_genomes_project 4 109828848 109830401 - Osbpl9 protein_coding processed_transcript MGP_129S1SvImJ_T0066905.1 MGP_129S1SvImJ_G0028567.1 mouse_genomes_project 4 109832419 109837801 - Osbpl9 protein_coding processed_transcript MGP_129S1SvImJ_T0066906.1 MGP_129S1SvImJ_G0028567.1 mouse_genomes_project 4 109832773 109886934 - Osbpl9 protein_coding processed_transcript MGP_129S1SvImJ_T0066907.1 MGP_129S1SvImJ_G0028567.1 mouse_genomes_project 4 109848804 109879011 - Osbpl9 protein_coding processed_transcript MGP_129S1SvImJ_T0066908.1 MGP_129S1SvImJ_G0028567.1 mouse_genomes_project 4 109848928 109928422 - Osbpl9 protein_coding retained_intron MGP_129S1SvImJ_T0066909.1 MGP_129S1SvImJ_G0028567.1 mouse_genomes_project 4 109852117 109854495 - Osbpl9 protein_coding retained_intron MGP_129S1SvImJ_T0066910.1 MGP_129S1SvImJ_G0028567.1 mouse_genomes_project 4 109853125 109877278 - Osbpl9 protein_coding processed_transcript MGP_129S1SvImJ_T0066911.1 MGP_129S1SvImJ_G0028567.1 mouse_genomes_project 4 109853162 109928751 - Osbpl9 protein_coding processed_transcript MGP_129S1SvImJ_T0066912.1 MGP_129S1SvImJ_G0028567.1 mouse_genomes_project 4 109903678 109974198 - Osbpl9 protein_coding processed_transcript MGP_129S1SvImJ_T0066913.1 MGP_129S1SvImJ_G0028567.1 mouse_genomes_project 4 109944689 109974196 - Osbpl9 protein_coding retained_intron MGP_129S1SvImJ_T0065722.1 MGP_129S1SvImJ_G0028289.1 mouse_genomes_project 4 49763216 49776422 + Cylc2 protein_coding processed_transcript MGP_129S1SvImJ_T0065723.1 MGP_129S1SvImJ_G0028289.1 mouse_genomes_project 4 49763216 49777734 + MGP_129S1SvImJ_P0065723 Cylc2 protein_coding protein_coding MGP_129S1SvImJ_T0065724.1 MGP_129S1SvImJ_G0028289.1 mouse_genomes_project 4 49763216 49778078 + MGP_129S1SvImJ_P0065724 Cylc2 protein_coding protein_coding MGP_129S1SvImJ_T0101142.1 MGP_129S1SvImJ_G0039209.1 mouse_genomes_project 4 106717810 106717923 - Gm26047 snoRNA snoRNA MGP_129S1SvImJ_T0069815.1 MGP_129S1SvImJ_G0029223.1 mouse_genomes_project 4 160056636 160088894 + MGP_129S1SvImJ_P0069815 Ssu72 protein_coding protein_coding MGP_129S1SvImJ_T0069816.1 MGP_129S1SvImJ_G0029223.1 mouse_genomes_project 4 160056960 160071925 + Ssu72 protein_coding retained_intron MGP_129S1SvImJ_T0069817.1 MGP_129S1SvImJ_G0029223.1 mouse_genomes_project 4 160056971 160087211 + MGP_129S1SvImJ_P0069817 Ssu72 protein_coding protein_coding MGP_129S1SvImJ_T0008035.1 MGP_129S1SvImJ_G0006561.1 mouse_genomes_project 4 153975087 153983042 + Gm13067 lincRNA lincRNA MGP_129S1SvImJ_T0068990.1 MGP_129S1SvImJ_G0029039.1 mouse_genomes_project 4 144129800 144157155 - Szrd1 protein_coding processed_transcript MGP_129S1SvImJ_T0068991.1 MGP_129S1SvImJ_G0029039.1 mouse_genomes_project 4 144129800 144157155 - Szrd1 protein_coding processed_transcript MGP_129S1SvImJ_T0068992.1 MGP_129S1SvImJ_G0029039.1 mouse_genomes_project 4 144129800 144157146 - MGP_129S1SvImJ_P0068992 Szrd1 protein_coding protein_coding MGP_129S1SvImJ_T0068993.1 MGP_129S1SvImJ_G0029039.1 mouse_genomes_project 4 144129800 144157107 - MGP_129S1SvImJ_P0068993 Szrd1 protein_coding protein_coding MGP_129S1SvImJ_T0068994.1 MGP_129S1SvImJ_G0029039.1 mouse_genomes_project 4 144133349 144157120 - Szrd1 protein_coding processed_transcript MGP_129S1SvImJ_T0067489.1 MGP_129S1SvImJ_G0028697.1 mouse_genomes_project 4 120512924 120550137 - Ccdc30 protein_coding retained_intron MGP_129S1SvImJ_T0067490.1 MGP_129S1SvImJ_G0028697.1 mouse_genomes_project 4 120513874 120612989 - MGP_129S1SvImJ_P0067490 Ccdc30 protein_coding protein_coding MGP_129S1SvImJ_T0067491.1 MGP_129S1SvImJ_G0028697.1 mouse_genomes_project 4 120530202 120543534 - Ccdc30 protein_coding retained_intron MGP_129S1SvImJ_T0067492.1 MGP_129S1SvImJ_G0028697.1 mouse_genomes_project 4 120542672 120612792 - MGP_129S1SvImJ_P0067492 Ccdc30 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0067493.1 MGP_129S1SvImJ_G0028697.1 mouse_genomes_project 4 120542679 120576227 - MGP_129S1SvImJ_P0067493 Ccdc30 protein_coding protein_coding MGP_129S1SvImJ_T0067494.1 MGP_129S1SvImJ_G0028697.1 mouse_genomes_project 4 120542680 120549930 - Ccdc30 protein_coding processed_transcript MGP_129S1SvImJ_T0067495.1 MGP_129S1SvImJ_G0028697.1 mouse_genomes_project 4 120543623 120588963 - MGP_129S1SvImJ_P0067495 Ccdc30 protein_coding protein_coding MGP_129S1SvImJ_T0067496.1 MGP_129S1SvImJ_G0028697.1 mouse_genomes_project 4 120550041 120567772 - Ccdc30 protein_coding processed_transcript MGP_129S1SvImJ_T0067497.1 MGP_129S1SvImJ_G0028697.1 mouse_genomes_project 4 120557944 120576301 - Ccdc30 protein_coding processed_transcript MGP_129S1SvImJ_T0067498.1 MGP_129S1SvImJ_G0028697.1 mouse_genomes_project 4 120557946 120569735 - Ccdc30 protein_coding retained_intron MGP_129S1SvImJ_T0067499.1 MGP_129S1SvImJ_G0028697.1 mouse_genomes_project 4 120557954 120576227 - MGP_129S1SvImJ_P0067499 Ccdc30 protein_coding protein_coding MGP_129S1SvImJ_T0067500.1 MGP_129S1SvImJ_G0028697.1 mouse_genomes_project 4 120564020 120576213 - Ccdc30 protein_coding retained_intron MGP_129S1SvImJ_T0067501.1 MGP_129S1SvImJ_G0028697.1 mouse_genomes_project 4 120588184 120595935 - Ccdc30 protein_coding processed_transcript MGP_129S1SvImJ_T0004562.1 MGP_129S1SvImJ_G0003965.1 mouse_genomes_project 4 132859890 132860531 - Gm12970 antisense antisense MGP_129S1SvImJ_T0066029.1 MGP_129S1SvImJ_G0028375.1 mouse_genomes_project 4 63000223 63062824 - MGP_129S1SvImJ_P0066029 Tnc protein_coding protein_coding MGP_129S1SvImJ_T0066030.1 MGP_129S1SvImJ_G0028375.1 mouse_genomes_project 4 63000223 63089085 - MGP_129S1SvImJ_P0066030 Tnc protein_coding protein_coding MGP_129S1SvImJ_T0066031.1 MGP_129S1SvImJ_G0028375.1 mouse_genomes_project 4 63000223 63062824 - MGP_129S1SvImJ_P0066031 Tnc protein_coding protein_coding MGP_129S1SvImJ_T0066032.1 MGP_129S1SvImJ_G0028375.1 mouse_genomes_project 4 63054767 63062824 - MGP_129S1SvImJ_P0066032 Tnc protein_coding protein_coding MGP_129S1SvImJ_T0014775.1 MGP_129S1SvImJ_G0012864.1 mouse_genomes_project 4 123375724 123376870 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101154.1 MGP_129S1SvImJ_G0039221.1 mouse_genomes_project 4 124737738 124737869 + Gm22154 snoRNA snoRNA MGP_129S1SvImJ_T0101117.1 MGP_129S1SvImJ_G0039184.1 mouse_genomes_project 4 55444354 55444486 - Gm26144 snoRNA snoRNA MGP_129S1SvImJ_T0064562.1 MGP_129S1SvImJ_G0028023.1 mouse_genomes_project 4 149293 214784 + Lyn protein_coding processed_transcript MGP_129S1SvImJ_T0064563.1 MGP_129S1SvImJ_G0028023.1 mouse_genomes_project 4 212950 267788 + MGP_129S1SvImJ_P0064563 Lyn protein_coding protein_coding MGP_129S1SvImJ_T0014479.1 MGP_129S1SvImJ_G0012568.1 mouse_genomes_project 4 23585647 23586375 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065830.1 MGP_129S1SvImJ_G0028319.1 mouse_genomes_project 4 56528777 56669434 + protein_coding processed_transcript MGP_129S1SvImJ_T0065831.1 MGP_129S1SvImJ_G0028319.1 mouse_genomes_project 4 56562993 56708280 + MGP_129S1SvImJ_P0065831 protein_coding protein_coding MGP_129S1SvImJ_T0065832.1 MGP_129S1SvImJ_G0028319.1 mouse_genomes_project 4 56594242 56667714 + MGP_129S1SvImJ_P0065832 protein_coding protein_coding MGP_129S1SvImJ_T0065833.1 MGP_129S1SvImJ_G0028319.1 mouse_genomes_project 4 56642115 56667561 + MGP_129S1SvImJ_P0065833 protein_coding protein_coding MGP_129S1SvImJ_T0065025.1 MGP_129S1SvImJ_G0028137.1 mouse_genomes_project 4 32807263 32842251 - MGP_129S1SvImJ_P0065025 3110043O21Rik protein_coding protein_coding MGP_129S1SvImJ_T0065026.1 MGP_129S1SvImJ_G0028137.1 mouse_genomes_project 4 32807268 32842553 - MGP_129S1SvImJ_P0065026 3110043O21Rik protein_coding protein_coding MGP_129S1SvImJ_T0065027.1 MGP_129S1SvImJ_G0028137.1 mouse_genomes_project 4 32813059 32824958 - 3110043O21Rik protein_coding retained_intron MGP_129S1SvImJ_T0065028.1 MGP_129S1SvImJ_G0028137.1 mouse_genomes_project 4 32827527 32842605 - 3110043O21Rik protein_coding retained_intron MGP_129S1SvImJ_T0065029.1 MGP_129S1SvImJ_G0028137.1 mouse_genomes_project 4 32834822 32842553 - 3110043O21Rik protein_coding processed_transcript MGP_129S1SvImJ_T0065030.1 MGP_129S1SvImJ_G0028137.1 mouse_genomes_project 4 32835006 32842553 - 3110043O21Rik protein_coding processed_transcript MGP_129S1SvImJ_T0014443.1 MGP_129S1SvImJ_G0012532.1 mouse_genomes_project 4 13288946 13290163 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101113.1 MGP_129S1SvImJ_G0039180.1 mouse_genomes_project 4 52569274 52569399 + Gm23745 snoRNA snoRNA MGP_129S1SvImJ_T0068387.1 MGP_129S1SvImJ_G0028901.1 mouse_genomes_project 4 135882426 135885408 - MGP_129S1SvImJ_P0068387 protein_coding protein_coding MGP_129S1SvImJ_T0007916.1 MGP_129S1SvImJ_G0006476.1 mouse_genomes_project 4 101647781 101659340 - E130102H24Rik lincRNA lincRNA MGP_129S1SvImJ_T0007918.1 MGP_129S1SvImJ_G0006476.1 mouse_genomes_project 4 101659133 101659827 - E130102H24Rik lincRNA lincRNA MGP_129S1SvImJ_T0007975.1 MGP_129S1SvImJ_G0006517.1 mouse_genomes_project 4 131206377 131219012 + Gm26722 lincRNA lincRNA MGP_129S1SvImJ_T0007845.1 MGP_129S1SvImJ_G0006417.1 mouse_genomes_project 4 43890959 43893327 + lincRNA lincRNA MGP_129S1SvImJ_T0068148.1 MGP_129S1SvImJ_G0028850.1 mouse_genomes_project 4 132321917 132365892 - MGP_129S1SvImJ_P0068148 Zcchc17 protein_coding protein_coding MGP_129S1SvImJ_T0068149.1 MGP_129S1SvImJ_G0028850.1 mouse_genomes_project 4 132322813 132325274 - Zcchc17 protein_coding processed_transcript MGP_129S1SvImJ_T0068150.1 MGP_129S1SvImJ_G0028850.1 mouse_genomes_project 4 132323229 132350810 - Zcchc17 protein_coding processed_transcript MGP_129S1SvImJ_T0068151.1 MGP_129S1SvImJ_G0028850.1 mouse_genomes_project 4 132343293 132345000 - Zcchc17 protein_coding processed_transcript MGP_129S1SvImJ_T0068152.1 MGP_129S1SvImJ_G0028850.1 mouse_genomes_project 4 132358065 132365865 - Zcchc17 protein_coding retained_intron MGP_129S1SvImJ_T0014812.1 MGP_129S1SvImJ_G0012901.1 mouse_genomes_project 4 137736586 137736776 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0069237.1 MGP_129S1SvImJ_G0029121.1 mouse_genomes_project 4 151852431 151858935 + MGP_129S1SvImJ_P0069237 Fbxo2 protein_coding protein_coding MGP_129S1SvImJ_T0018099.1 MGP_129S1SvImJ_G0015558.1 mouse_genomes_project 4 95079305 95099311 - Gm12703 processed_transcript processed_transcript MGP_129S1SvImJ_T0008029.1 MGP_129S1SvImJ_G0006555.1 mouse_genomes_project 4 145465616 145504952 - Gm13052 lincRNA lincRNA MGP_129S1SvImJ_T0004595.1 MGP_129S1SvImJ_G0003993.1 mouse_genomes_project 4 145216726 145220868 + Tmem51os1 antisense antisense MGP_129S1SvImJ_T0004596.1 MGP_129S1SvImJ_G0003993.1 mouse_genomes_project 4 145217055 145220924 + Tmem51os1 antisense antisense MGP_129S1SvImJ_T0004597.1 MGP_129S1SvImJ_G0003993.1 mouse_genomes_project 4 145217097 145220861 + Tmem51os1 antisense antisense MGP_129S1SvImJ_T0004598.1 MGP_129S1SvImJ_G0003993.1 mouse_genomes_project 4 145217613 145220902 + Tmem51os1 antisense antisense MGP_129S1SvImJ_T0001430.1 MGP_129S1SvImJ_G0001353.1 mouse_genomes_project 4 42855114 42856682 + TEC TEC MGP_129S1SvImJ_T0004442.1 MGP_129S1SvImJ_G0003875.1 mouse_genomes_project 4 8727709 8740413 + Gm11842 antisense antisense MGP_129S1SvImJ_T0065287.1 MGP_129S1SvImJ_G0028201.1 mouse_genomes_project 4 41141721 41253618 + Unc13b protein_coding retained_intron MGP_129S1SvImJ_T0065288.1 MGP_129S1SvImJ_G0028201.1 mouse_genomes_project 4 41141737 41362879 + MGP_129S1SvImJ_P0065288 Unc13b protein_coding protein_coding MGP_129S1SvImJ_T0065289.1 MGP_129S1SvImJ_G0028201.1 mouse_genomes_project 4 41141744 41258966 + Unc13b protein_coding processed_transcript MGP_129S1SvImJ_T0065290.1 MGP_129S1SvImJ_G0028201.1 mouse_genomes_project 4 41141752 41256045 + Unc13b protein_coding retained_intron MGP_129S1SvImJ_T0065291.1 MGP_129S1SvImJ_G0028201.1 mouse_genomes_project 4 41141841 41361636 + MGP_129S1SvImJ_P0065291 Unc13b protein_coding protein_coding MGP_129S1SvImJ_T0065292.1 MGP_129S1SvImJ_G0028201.1 mouse_genomes_project 4 41141841 41361636 + MGP_129S1SvImJ_P0065292 Unc13b protein_coding protein_coding MGP_129S1SvImJ_T0065293.1 MGP_129S1SvImJ_G0028201.1 mouse_genomes_project 4 41141848 41361619 + MGP_129S1SvImJ_P0065293 Unc13b protein_coding protein_coding MGP_129S1SvImJ_T0065294.1 MGP_129S1SvImJ_G0028201.1 mouse_genomes_project 4 41204735 41330213 + Unc13b protein_coding processed_transcript MGP_129S1SvImJ_T0065295.1 MGP_129S1SvImJ_G0028201.1 mouse_genomes_project 4 41265446 41324979 + Unc13b protein_coding processed_transcript MGP_129S1SvImJ_T0065296.1 MGP_129S1SvImJ_G0028201.1 mouse_genomes_project 4 41268059 41329531 + MGP_129S1SvImJ_P0065296 Unc13b protein_coding protein_coding MGP_129S1SvImJ_T0065297.1 MGP_129S1SvImJ_G0028201.1 mouse_genomes_project 4 41308273 41362888 + MGP_129S1SvImJ_P0065297 Unc13b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0065298.1 MGP_129S1SvImJ_G0028201.1 mouse_genomes_project 4 41322543 41325394 + Unc13b protein_coding retained_intron MGP_129S1SvImJ_T0065299.1 MGP_129S1SvImJ_G0028201.1 mouse_genomes_project 4 41326243 41344364 + Unc13b protein_coding retained_intron MGP_129S1SvImJ_T0065300.1 MGP_129S1SvImJ_G0028201.1 mouse_genomes_project 4 41347091 41354189 + Unc13b protein_coding retained_intron MGP_129S1SvImJ_T0065301.1 MGP_129S1SvImJ_G0028201.1 mouse_genomes_project 4 41353467 41356378 + MGP_129S1SvImJ_P0065301 Unc13b protein_coding protein_coding MGP_129S1SvImJ_T0065302.1 MGP_129S1SvImJ_G0028201.1 mouse_genomes_project 4 41354754 41359707 + Unc13b protein_coding retained_intron MGP_129S1SvImJ_T0068527.1 MGP_129S1SvImJ_G0028930.1 mouse_genomes_project 4 136886870 136896675 - MGP_129S1SvImJ_P0068527 Mtfr1l protein_coding protein_coding MGP_129S1SvImJ_T0068528.1 MGP_129S1SvImJ_G0028930.1 mouse_genomes_project 4 136886877 136896794 - MGP_129S1SvImJ_P0068528 Mtfr1l protein_coding protein_coding MGP_129S1SvImJ_T0068529.1 MGP_129S1SvImJ_G0028930.1 mouse_genomes_project 4 136886884 136896705 - MGP_129S1SvImJ_P0068529 Mtfr1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0068530.1 MGP_129S1SvImJ_G0028930.1 mouse_genomes_project 4 136889685 136896665 - Mtfr1l protein_coding retained_intron MGP_129S1SvImJ_T0068531.1 MGP_129S1SvImJ_G0028930.1 mouse_genomes_project 4 136890426 136896503 - MGP_129S1SvImJ_P0068531 Mtfr1l protein_coding protein_coding MGP_129S1SvImJ_T0068532.1 MGP_129S1SvImJ_G0028930.1 mouse_genomes_project 4 136890461 136896794 - MGP_129S1SvImJ_P0068532 Mtfr1l protein_coding protein_coding MGP_129S1SvImJ_T0068533.1 MGP_129S1SvImJ_G0028930.1 mouse_genomes_project 4 136890533 136896451 - Mtfr1l protein_coding retained_intron MGP_129S1SvImJ_T0099808.1 MGP_129S1SvImJ_G0037875.1 mouse_genomes_project 4 6330012 6330175 - Gm24152 snRNA snRNA MGP_129S1SvImJ_T0014569.1 MGP_129S1SvImJ_G0012658.1 mouse_genomes_project 4 51504696 51507405 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0066805.1 MGP_129S1SvImJ_G0028548.1 mouse_genomes_project 4 108758381 108840983 - MGP_129S1SvImJ_P0066805 Scp2 protein_coding protein_coding MGP_129S1SvImJ_T0066806.1 MGP_129S1SvImJ_G0028548.1 mouse_genomes_project 4 108758810 108765503 - Scp2 protein_coding processed_transcript MGP_129S1SvImJ_T0066807.1 MGP_129S1SvImJ_G0028548.1 mouse_genomes_project 4 108758920 108789941 - Scp2 protein_coding processed_transcript MGP_129S1SvImJ_T0066808.1 MGP_129S1SvImJ_G0028548.1 mouse_genomes_project 4 108759092 108789997 - MGP_129S1SvImJ_P0066808 Scp2 protein_coding protein_coding MGP_129S1SvImJ_T0066809.1 MGP_129S1SvImJ_G0028548.1 mouse_genomes_project 4 108759380 108840927 - Scp2 protein_coding processed_transcript MGP_129S1SvImJ_T0066810.1 MGP_129S1SvImJ_G0028548.1 mouse_genomes_project 4 108807011 108840955 - MGP_129S1SvImJ_P0066810 Scp2 protein_coding protein_coding MGP_129S1SvImJ_T0066811.1 MGP_129S1SvImJ_G0028548.1 mouse_genomes_project 4 108810996 108840846 - Scp2 protein_coding processed_transcript MGP_129S1SvImJ_T0066812.1 MGP_129S1SvImJ_G0028548.1 mouse_genomes_project 4 108811305 108872628 - Scp2 protein_coding processed_transcript MGP_129S1SvImJ_T0066813.1 MGP_129S1SvImJ_G0028548.1 mouse_genomes_project 4 108823456 108872632 - MGP_129S1SvImJ_P0066813 Scp2 protein_coding protein_coding MGP_129S1SvImJ_T0004593.1 MGP_129S1SvImJ_G0003991.1 mouse_genomes_project 4 145107123 145110963 + Fhad1os1 antisense antisense MGP_129S1SvImJ_T0066717.1 MGP_129S1SvImJ_G0028534.1 mouse_genomes_project 4 107884967 107894081 + MGP_129S1SvImJ_P0066717 Ldlrad1 protein_coding protein_coding MGP_129S1SvImJ_T0069510.1 MGP_129S1SvImJ_G0029172.1 mouse_genomes_project 4 156215621 156219815 + MGP_129S1SvImJ_P0069510 Tnfrsf25 protein_coding protein_coding MGP_129S1SvImJ_T0069511.1 MGP_129S1SvImJ_G0029172.1 mouse_genomes_project 4 156216030 156219807 + MGP_129S1SvImJ_P0069511 Tnfrsf25 protein_coding protein_coding MGP_129S1SvImJ_T0069512.1 MGP_129S1SvImJ_G0029172.1 mouse_genomes_project 4 156216086 156216680 + Tnfrsf25 protein_coding processed_transcript MGP_129S1SvImJ_T0069513.1 MGP_129S1SvImJ_G0029172.1 mouse_genomes_project 4 156217664 156219019 + Tnfrsf25 protein_coding processed_transcript MGP_129S1SvImJ_T0014661.1 MGP_129S1SvImJ_G0012750.1 mouse_genomes_project 4 88467814 88468450 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0064615.1 MGP_129S1SvImJ_G0028036.1 mouse_genomes_project 4 2901723 2970521 - Nsmaf protein_coding retained_intron MGP_129S1SvImJ_T0064616.1 MGP_129S1SvImJ_G0028036.1 mouse_genomes_project 4 2901723 2970521 - MGP_129S1SvImJ_P0064616 Nsmaf protein_coding protein_coding MGP_129S1SvImJ_T0064617.1 MGP_129S1SvImJ_G0028036.1 mouse_genomes_project 4 2901927 2904523 - Nsmaf protein_coding retained_intron MGP_129S1SvImJ_T0064618.1 MGP_129S1SvImJ_G0028036.1 mouse_genomes_project 4 2902285 2970346 - Nsmaf protein_coding processed_transcript MGP_129S1SvImJ_T0064619.1 MGP_129S1SvImJ_G0028036.1 mouse_genomes_project 4 2911902 2970505 - Nsmaf protein_coding processed_transcript MGP_129S1SvImJ_T0064620.1 MGP_129S1SvImJ_G0028036.1 mouse_genomes_project 4 2914521 2930746 - Nsmaf protein_coding retained_intron MGP_129S1SvImJ_T0064621.1 MGP_129S1SvImJ_G0028036.1 mouse_genomes_project 4 2931327 2943259 - Nsmaf protein_coding retained_intron MGP_129S1SvImJ_T0064622.1 MGP_129S1SvImJ_G0028036.1 mouse_genomes_project 4 2935209 2969829 - Nsmaf protein_coding processed_transcript MGP_129S1SvImJ_T0064623.1 MGP_129S1SvImJ_G0028036.1 mouse_genomes_project 4 2936488 2963019 - Nsmaf protein_coding processed_transcript MGP_129S1SvImJ_T0064624.1 MGP_129S1SvImJ_G0028036.1 mouse_genomes_project 4 2943832 2970347 - MGP_129S1SvImJ_P0064624 Nsmaf protein_coding protein_coding MGP_129S1SvImJ_T0064625.1 MGP_129S1SvImJ_G0028036.1 mouse_genomes_project 4 2948473 2961089 - Nsmaf protein_coding processed_transcript MGP_129S1SvImJ_T0066163.1 MGP_129S1SvImJ_G0028404.1 mouse_genomes_project 4 83053692 83087932 - MGP_129S1SvImJ_P0066163 Psip1 protein_coding protein_coding MGP_129S1SvImJ_T0066164.1 MGP_129S1SvImJ_G0028404.1 mouse_genomes_project 4 83057599 83060863 - Psip1 protein_coding retained_intron MGP_129S1SvImJ_T0066165.1 MGP_129S1SvImJ_G0028404.1 mouse_genomes_project 4 83062440 83065547 - MGP_129S1SvImJ_P0066165 Psip1 protein_coding protein_coding MGP_129S1SvImJ_T0066166.1 MGP_129S1SvImJ_G0028404.1 mouse_genomes_project 4 83062440 83087926 - MGP_129S1SvImJ_P0066166 Psip1 protein_coding protein_coding MGP_129S1SvImJ_T0066167.1 MGP_129S1SvImJ_G0028404.1 mouse_genomes_project 4 83062440 83087931 - MGP_129S1SvImJ_P0066167 Psip1 protein_coding protein_coding MGP_129S1SvImJ_T0066168.1 MGP_129S1SvImJ_G0028404.1 mouse_genomes_project 4 83063402 83065626 - Psip1 protein_coding retained_intron MGP_129S1SvImJ_T0066170.1 MGP_129S1SvImJ_G0028404.1 mouse_genomes_project 4 83076861 83087657 - MGP_129S1SvImJ_P0066170 Psip1 protein_coding protein_coding MGP_129S1SvImJ_T0065938.1 MGP_129S1SvImJ_G0028352.1 mouse_genomes_project 4 61413558 61421245 - MGP_129S1SvImJ_P0065938 Rnf183 protein_coding protein_coding MGP_129S1SvImJ_T0065939.1 MGP_129S1SvImJ_G0028352.1 mouse_genomes_project 4 61413560 61420719 - MGP_129S1SvImJ_P0065939 Rnf183 protein_coding protein_coding MGP_129S1SvImJ_T0065940.1 MGP_129S1SvImJ_G0028352.1 mouse_genomes_project 4 61414005 61414578 - MGP_129S1SvImJ_P0065940 Rnf183 protein_coding protein_coding MGP_129S1SvImJ_T0098940.1 MGP_129S1SvImJ_G0037018.1 mouse_genomes_project 4 156310760 156311215 + Gm13096 sense_intronic sense_intronic MGP_129S1SvImJ_T0065731.1 MGP_129S1SvImJ_G0028291.1 mouse_genomes_project 4 51192198 51207796 + MGP_129S1SvImJ_P0065731 Toporsl protein_coding protein_coding MGP_129S1SvImJ_T0065732.1 MGP_129S1SvImJ_G0028291.1 mouse_genomes_project 4 51202585 51207793 + MGP_129S1SvImJ_P0065732 Toporsl protein_coding protein_coding MGP_129S1SvImJ_T0099888.1 MGP_129S1SvImJ_G0037955.1 mouse_genomes_project 4 152164047 152164199 - Gm23303 snRNA snRNA MGP_129S1SvImJ_T0067051.1 MGP_129S1SvImJ_G0028600.1 mouse_genomes_project 4 116252629 116277817 + MGP_129S1SvImJ_P0067051 Cyp4a30b protein_coding protein_coding MGP_129S1SvImJ_T0014432.1 MGP_129S1SvImJ_G0012521.1 mouse_genomes_project 4 11986546 11986873 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007893.1 MGP_129S1SvImJ_G0006456.1 mouse_genomes_project 4 83732809 83736749 - Gm12414 lincRNA lincRNA MGP_129S1SvImJ_T0001452.1 MGP_129S1SvImJ_G0001373.1 mouse_genomes_project 4 155989035 155989457 - TEC TEC MGP_129S1SvImJ_T0101159.1 MGP_129S1SvImJ_G0039226.1 mouse_genomes_project 4 132814602 132814685 + Gm23711 snoRNA snoRNA MGP_129S1SvImJ_T0014656.1 MGP_129S1SvImJ_G0012745.1 mouse_genomes_project 4 86206291 86206620 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0065699.1 MGP_129S1SvImJ_G0028283.1 mouse_genomes_project 4 48003208 48014246 + MGP_129S1SvImJ_P0065699 Zfp189 protein_coding protein_coding MGP_129S1SvImJ_T0065700.1 MGP_129S1SvImJ_G0028283.1 mouse_genomes_project 4 48003249 48014246 + MGP_129S1SvImJ_P0065700 Zfp189 protein_coding protein_coding MGP_129S1SvImJ_T0064720.1 MGP_129S1SvImJ_G0028054.1 mouse_genomes_project 4 8228995 8268132 + Rad54b protein_coding processed_transcript MGP_129S1SvImJ_T0064721.1 MGP_129S1SvImJ_G0028054.1 mouse_genomes_project 4 8229015 8260214 + MGP_129S1SvImJ_P0064721 Rad54b protein_coding protein_coding MGP_129S1SvImJ_T0064722.1 MGP_129S1SvImJ_G0028054.1 mouse_genomes_project 4 8229022 8252614 + MGP_129S1SvImJ_P0064722 Rad54b protein_coding protein_coding MGP_129S1SvImJ_T0064723.1 MGP_129S1SvImJ_G0028054.1 mouse_genomes_project 4 8229045 8291427 + MGP_129S1SvImJ_P0064723 Rad54b protein_coding protein_coding MGP_129S1SvImJ_T0064724.1 MGP_129S1SvImJ_G0028054.1 mouse_genomes_project 4 8250299 8270270 + Rad54b protein_coding processed_transcript MGP_129S1SvImJ_T0064726.1 MGP_129S1SvImJ_G0028054.1 mouse_genomes_project 4 8270369 8281766 + MGP_129S1SvImJ_P0064726 Rad54b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0064727.1 MGP_129S1SvImJ_G0028054.1 mouse_genomes_project 4 8284996 8286403 + Rad54b protein_coding retained_intron MGP_129S1SvImJ_T0066280.1 MGP_129S1SvImJ_G0028426.1 mouse_genomes_project 4 88493536 88500431 - MGP_129S1SvImJ_P0066280 C87499 protein_coding protein_coding MGP_129S1SvImJ_T0066281.1 MGP_129S1SvImJ_G0028426.1 mouse_genomes_project 4 88493536 88500383 - MGP_129S1SvImJ_P0066281 C87499 protein_coding protein_coding MGP_129S1SvImJ_T0066282.1 MGP_129S1SvImJ_G0028426.1 mouse_genomes_project 4 88494385 88500583 - MGP_129S1SvImJ_P0066282 C87499 protein_coding protein_coding MGP_129S1SvImJ_T0066283.1 MGP_129S1SvImJ_G0028426.1 mouse_genomes_project 4 88495114 88500314 - MGP_129S1SvImJ_P0066283 C87499 protein_coding protein_coding MGP_129S1SvImJ_T0066284.1 MGP_129S1SvImJ_G0028426.1 mouse_genomes_project 4 88495404 88500363 - MGP_129S1SvImJ_P0066284 C87499 protein_coding protein_coding MGP_129S1SvImJ_T0004454.1 MGP_129S1SvImJ_G0003883.1 mouse_genomes_project 4 32572749 32577495 + Gm12364 antisense antisense MGP_129S1SvImJ_T0014719.1 MGP_129S1SvImJ_G0012808.1 mouse_genomes_project 4 107953428 107953864 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099851.1 MGP_129S1SvImJ_G0037918.1 mouse_genomes_project 4 101466515 101466619 + Gm24468 snRNA snRNA MGP_129S1SvImJ_T0101138.1 MGP_129S1SvImJ_G0039205.1 mouse_genomes_project 4 94156473 94156602 + Gm23836 snoRNA snoRNA MGP_129S1SvImJ_T0010665.1 MGP_129S1SvImJ_G0008781.1 mouse_genomes_project 4 143638329 143638425 + Gm23045 miRNA miRNA MGP_129S1SvImJ_T0069504.1 MGP_129S1SvImJ_G0029171.1 mouse_genomes_project 4 156186505 156214527 + MGP_129S1SvImJ_P0069504 Plekhg5 protein_coding protein_coding MGP_129S1SvImJ_T0069505.1 MGP_129S1SvImJ_G0029171.1 mouse_genomes_project 4 156196247 156215088 + MGP_129S1SvImJ_P0069505 Plekhg5 protein_coding protein_coding MGP_129S1SvImJ_T0069506.1 MGP_129S1SvImJ_G0029171.1 mouse_genomes_project 4 156196247 156215078 + MGP_129S1SvImJ_P0069506 Plekhg5 protein_coding protein_coding MGP_129S1SvImJ_T0069507.1 MGP_129S1SvImJ_G0029171.1 mouse_genomes_project 4 156204108 156205804 + Plekhg5 protein_coding retained_intron MGP_129S1SvImJ_T0069508.1 MGP_129S1SvImJ_G0029171.1 mouse_genomes_project 4 156207245 156215082 + Plekhg5 protein_coding retained_intron MGP_129S1SvImJ_T0069509.1 MGP_129S1SvImJ_G0029171.1 mouse_genomes_project 4 156207338 156207992 + Plekhg5 protein_coding retained_intron MGP_129S1SvImJ_T0102534.1 MGP_129S1SvImJ_G0040367.1 mouse_genomes_project 4 114820893 114821903 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0007874.1 MGP_129S1SvImJ_G0006439.1 mouse_genomes_project 4 61698604 61711748 + lincRNA lincRNA MGP_129S1SvImJ_T0015039.1 MGP_129S1SvImJ_G0013128.1 mouse_genomes_project 5 69786412 69786696 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015080.1 MGP_129S1SvImJ_G0013169.1 mouse_genomes_project 5 89223686 89224065 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014936.1 MGP_129S1SvImJ_G0013025.1 mouse_genomes_project 5 24866265 24867934 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010759.1 MGP_129S1SvImJ_G0008875.1 mouse_genomes_project 5 152926428 152926538 - Mir7k miRNA miRNA MGP_129S1SvImJ_T0074349.1 MGP_129S1SvImJ_G0030080.1 mouse_genomes_project 5 127625730 127627660 - MGP_129S1SvImJ_P0074349 Hcar2 protein_coding protein_coding MGP_129S1SvImJ_T0001598.1 MGP_129S1SvImJ_G0001515.1 mouse_genomes_project 5 48061807 48062195 - TEC TEC MGP_129S1SvImJ_T0015053.1 MGP_129S1SvImJ_G0013142.1 mouse_genomes_project 5 76238042 76238392 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070241.1 MGP_129S1SvImJ_G0029302.1 mouse_genomes_project 5 14854003 14858589 + MGP_129S1SvImJ_P0070241 protein_coding protein_coding MGP_129S1SvImJ_T0001640.1 MGP_129S1SvImJ_G0001557.1 mouse_genomes_project 5 59419318 59421939 - TEC TEC MGP_129S1SvImJ_T0075091.1 MGP_129S1SvImJ_G0030210.1 mouse_genomes_project 5 141654821 141668021 + MGP_129S1SvImJ_P0075091 Fis1 protein_coding protein_coding MGP_129S1SvImJ_T0075092.1 MGP_129S1SvImJ_G0030210.1 mouse_genomes_project 5 141654952 141667938 + MGP_129S1SvImJ_P0075092 Fis1 protein_coding protein_coding MGP_129S1SvImJ_T0075093.1 MGP_129S1SvImJ_G0030210.1 mouse_genomes_project 5 141663878 141668023 + MGP_129S1SvImJ_P0075093 Fis1 protein_coding protein_coding MGP_129S1SvImJ_T0075094.1 MGP_129S1SvImJ_G0030210.1 mouse_genomes_project 5 141664234 141667746 + Fis1 protein_coding processed_transcript MGP_129S1SvImJ_T0075095.1 MGP_129S1SvImJ_G0030210.1 mouse_genomes_project 5 141664245 141667899 + Fis1 protein_coding processed_transcript MGP_129S1SvImJ_T0075096.1 MGP_129S1SvImJ_G0030210.1 mouse_genomes_project 5 141664646 141667800 + Fis1 protein_coding processed_transcript MGP_129S1SvImJ_T0072221.1 MGP_129S1SvImJ_G0029643.1 mouse_genomes_project 5 76484048 76503640 - MGP_129S1SvImJ_P0072221 Pdcl2 protein_coding protein_coding MGP_129S1SvImJ_T0072222.1 MGP_129S1SvImJ_G0029643.1 mouse_genomes_project 5 76484060 76503663 - MGP_129S1SvImJ_P0072222 Pdcl2 protein_coding protein_coding MGP_129S1SvImJ_T0001634.1 MGP_129S1SvImJ_G0001551.1 mouse_genomes_project 5 57273164 57275268 + TEC TEC MGP_129S1SvImJ_T0075656.1 MGP_129S1SvImJ_G0030326.1 mouse_genomes_project 5 148571262 148591577 - MGP_129S1SvImJ_P0075656 Zfp316 protein_coding protein_coding MGP_129S1SvImJ_T0075657.1 MGP_129S1SvImJ_G0030326.1 mouse_genomes_project 5 148571854 148577767 - Zfp316 protein_coding retained_intron MGP_129S1SvImJ_T0075658.1 MGP_129S1SvImJ_G0030326.1 mouse_genomes_project 5 148574775 148586226 - MGP_129S1SvImJ_P0075658 Zfp316 protein_coding protein_coding MGP_129S1SvImJ_T0071991.1 MGP_129S1SvImJ_G0029601.1 mouse_genomes_project 5 68948800 69189200 - MGP_129S1SvImJ_P0071991 Kctd8 protein_coding protein_coding MGP_129S1SvImJ_T0071992.1 MGP_129S1SvImJ_G0029601.1 mouse_genomes_project 5 69140304 69189198 - MGP_129S1SvImJ_P0071992 Kctd8 protein_coding protein_coding MGP_129S1SvImJ_T0099973.1 MGP_129S1SvImJ_G0038040.1 mouse_genomes_project 5 143016280 143016358 + Gm22956 snRNA snRNA MGP_129S1SvImJ_T0071011.1 MGP_129S1SvImJ_G0029442.1 mouse_genomes_project 5 31365005 31384680 - Spon2 protein_coding retained_intron MGP_129S1SvImJ_T0071012.1 MGP_129S1SvImJ_G0029442.1 mouse_genomes_project 5 31382660 31387183 - MGP_129S1SvImJ_P0071012 Spon2 protein_coding protein_coding MGP_129S1SvImJ_T0071013.1 MGP_129S1SvImJ_G0029442.1 mouse_genomes_project 5 31382667 31386913 - Spon2 protein_coding retained_intron MGP_129S1SvImJ_T0071014.1 MGP_129S1SvImJ_G0029442.1 mouse_genomes_project 5 31382668 31384691 - Spon2 protein_coding retained_intron MGP_129S1SvImJ_T0071015.1 MGP_129S1SvImJ_G0029442.1 mouse_genomes_project 5 31385156 31386923 - MGP_129S1SvImJ_P0071015 Spon2 protein_coding protein_coding MGP_129S1SvImJ_T0008215.1 MGP_129S1SvImJ_G0006699.1 mouse_genomes_project 5 94006757 94012006 - 4932430I15Rik lincRNA lincRNA MGP_129S1SvImJ_T0008265.1 MGP_129S1SvImJ_G0006735.1 mouse_genomes_project 5 108321021 108322837 + Gm42916 lincRNA lincRNA MGP_129S1SvImJ_T0102576.1 MGP_129S1SvImJ_G0040409.1 mouse_genomes_project 5 129716659 129717324 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0018216.1 MGP_129S1SvImJ_G0015612.1 mouse_genomes_project 5 127101508 127102964 + 5830487J09Rik processed_transcript sense_intronic MGP_129S1SvImJ_T0018217.1 MGP_129S1SvImJ_G0015612.1 mouse_genomes_project 5 127102007 127103922 + 5830487J09Rik processed_transcript TEC MGP_129S1SvImJ_T0008350.1 MGP_129S1SvImJ_G0006790.1 mouse_genomes_project 5 122925686 122940977 + Gm16064 lincRNA lincRNA MGP_129S1SvImJ_T0015049.1 MGP_129S1SvImJ_G0013138.1 mouse_genomes_project 5 75159185 75160719 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0074951.1 MGP_129S1SvImJ_G0030187.1 mouse_genomes_project 5 140240490 140309919 + MGP_129S1SvImJ_P0074951 Por protein_coding protein_coding MGP_129S1SvImJ_T0074952.1 MGP_129S1SvImJ_G0030187.1 mouse_genomes_project 5 140245038 140260580 + Por protein_coding processed_transcript MGP_129S1SvImJ_T0074953.1 MGP_129S1SvImJ_G0030187.1 mouse_genomes_project 5 140245042 140309375 + MGP_129S1SvImJ_P0074953 Por protein_coding protein_coding MGP_129S1SvImJ_T0074954.1 MGP_129S1SvImJ_G0030187.1 mouse_genomes_project 5 140264616 140313584 + MGP_129S1SvImJ_P0074954 Por protein_coding protein_coding MGP_129S1SvImJ_T0074955.1 MGP_129S1SvImJ_G0030187.1 mouse_genomes_project 5 140264738 140313584 + MGP_129S1SvImJ_P0074955 Por protein_coding protein_coding MGP_129S1SvImJ_T0074956.1 MGP_129S1SvImJ_G0030187.1 mouse_genomes_project 5 140292072 140310136 + Por protein_coding retained_intron MGP_129S1SvImJ_T0074957.1 MGP_129S1SvImJ_G0030187.1 mouse_genomes_project 5 140303987 140308499 + MGP_129S1SvImJ_P0074957 Por protein_coding protein_coding MGP_129S1SvImJ_T0074958.1 MGP_129S1SvImJ_G0030187.1 mouse_genomes_project 5 140309807 140312173 + Por protein_coding retained_intron MGP_129S1SvImJ_T0074959.1 MGP_129S1SvImJ_G0030187.1 mouse_genomes_project 5 140311438 140312305 + Por protein_coding retained_intron MGP_129S1SvImJ_T0074474.1 MGP_129S1SvImJ_G0030102.1 mouse_genomes_project 5 128411391 128431632 + MGP_129S1SvImJ_P0074474 Gtf2h3 protein_coding protein_coding MGP_129S1SvImJ_T0074475.1 MGP_129S1SvImJ_G0030102.1 mouse_genomes_project 5 128411393 128413939 + Gtf2h3 protein_coding retained_intron MGP_129S1SvImJ_T0074476.1 MGP_129S1SvImJ_G0030102.1 mouse_genomes_project 5 128411417 128424409 + Gtf2h3 protein_coding retained_intron MGP_129S1SvImJ_T0074477.1 MGP_129S1SvImJ_G0030102.1 mouse_genomes_project 5 128416120 128427338 + Gtf2h3 protein_coding retained_intron MGP_129S1SvImJ_T0074478.1 MGP_129S1SvImJ_G0030102.1 mouse_genomes_project 5 128422160 128428323 + Gtf2h3 protein_coding retained_intron MGP_129S1SvImJ_T0074479.1 MGP_129S1SvImJ_G0030102.1 mouse_genomes_project 5 128426029 128427347 + Gtf2h3 protein_coding retained_intron MGP_129S1SvImJ_T0015182.1 MGP_129S1SvImJ_G0013271.1 mouse_genomes_project 5 138268562 138269406 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073486.1 MGP_129S1SvImJ_G0029928.1 mouse_genomes_project 5 116713831 116736391 + MGP_129S1SvImJ_P0073486 Dao protein_coding protein_coding MGP_129S1SvImJ_T0073487.1 MGP_129S1SvImJ_G0029928.1 mouse_genomes_project 5 116714012 116736158 + MGP_129S1SvImJ_P0073487 Dao protein_coding protein_coding MGP_129S1SvImJ_T0073488.1 MGP_129S1SvImJ_G0029928.1 mouse_genomes_project 5 116714937 116736158 + MGP_129S1SvImJ_P0073488 Dao protein_coding protein_coding MGP_129S1SvImJ_T0073489.1 MGP_129S1SvImJ_G0029928.1 mouse_genomes_project 5 116720849 116726266 + MGP_129S1SvImJ_P0073489 Dao protein_coding protein_coding MGP_129S1SvImJ_T0073490.1 MGP_129S1SvImJ_G0029928.1 mouse_genomes_project 5 116727859 116730772 + Dao protein_coding retained_intron MGP_129S1SvImJ_T0075910.1 MGP_129S1SvImJ_G0030383.1 mouse_genomes_project 5 152641742 152705753 - MGP_129S1SvImJ_P0075910 Lnx2 protein_coding protein_coding MGP_129S1SvImJ_T0075911.1 MGP_129S1SvImJ_G0030383.1 mouse_genomes_project 5 152645039 152645811 - Lnx2 protein_coding processed_transcript MGP_129S1SvImJ_T0001484.1 MGP_129S1SvImJ_G0001405.1 mouse_genomes_project 5 13449786 13452438 + TEC TEC MGP_129S1SvImJ_T0008243.1 MGP_129S1SvImJ_G0006719.1 mouse_genomes_project 5 102431636 102435343 - Gm36793 lincRNA lincRNA MGP_129S1SvImJ_T0001793.1 MGP_129S1SvImJ_G0001708.1 mouse_genomes_project 5 116826758 116828609 + TEC TEC MGP_129S1SvImJ_T0071492.1 MGP_129S1SvImJ_G0029520.1 mouse_genomes_project 5 40672360 40826154 + MGP_129S1SvImJ_P0071492 Gm16223 protein_coding protein_coding MGP_129S1SvImJ_T0004778.1 MGP_129S1SvImJ_G0004128.1 mouse_genomes_project 5 105782598 105789419 + Gm26703 antisense antisense MGP_129S1SvImJ_T0004779.1 MGP_129S1SvImJ_G0004128.1 mouse_genomes_project 5 105782672 105784308 + Gm26703 antisense antisense MGP_129S1SvImJ_T0004780.1 MGP_129S1SvImJ_G0004128.1 mouse_genomes_project 5 105787278 105792878 + Gm26703 antisense antisense MGP_129S1SvImJ_T0001857.1 MGP_129S1SvImJ_G0001771.1 mouse_genomes_project 5 132539747 132541223 + TEC TEC MGP_129S1SvImJ_T0008382.1 MGP_129S1SvImJ_G0006810.1 mouse_genomes_project 5 129845180 129869863 + Gm42952 lincRNA lincRNA MGP_129S1SvImJ_T0008383.1 MGP_129S1SvImJ_G0006810.1 mouse_genomes_project 5 129848808 129870064 + Gm42952 lincRNA lincRNA MGP_129S1SvImJ_T0008384.1 MGP_129S1SvImJ_G0006810.1 mouse_genomes_project 5 129848820 129863458 + Gm42952 lincRNA lincRNA MGP_129S1SvImJ_T0008385.1 MGP_129S1SvImJ_G0006810.1 mouse_genomes_project 5 129848825 129862112 + Gm42952 lincRNA lincRNA MGP_129S1SvImJ_T0008386.1 MGP_129S1SvImJ_G0006810.1 mouse_genomes_project 5 129848830 129870007 + Gm42952 lincRNA lincRNA MGP_129S1SvImJ_T0008387.1 MGP_129S1SvImJ_G0006810.1 mouse_genomes_project 5 129848844 129863089 + Gm42952 lincRNA lincRNA MGP_129S1SvImJ_T0071227.1 MGP_129S1SvImJ_G0029473.1 mouse_genomes_project 5 33204699 33293144 + MGP_129S1SvImJ_P0071227 Rgs12 protein_coding protein_coding MGP_129S1SvImJ_T0071228.1 MGP_129S1SvImJ_G0029473.1 mouse_genomes_project 5 33204702 33279643 + Rgs12 protein_coding retained_intron MGP_129S1SvImJ_T0071229.1 MGP_129S1SvImJ_G0029473.1 mouse_genomes_project 5 33224413 33300663 + MGP_129S1SvImJ_P0071229 Rgs12 protein_coding protein_coding MGP_129S1SvImJ_T0071230.1 MGP_129S1SvImJ_G0029473.1 mouse_genomes_project 5 33233459 33234924 + Rgs12 protein_coding processed_transcript MGP_129S1SvImJ_T0071231.1 MGP_129S1SvImJ_G0029473.1 mouse_genomes_project 5 33234634 33279054 + Rgs12 protein_coding processed_transcript MGP_129S1SvImJ_T0071232.1 MGP_129S1SvImJ_G0029473.1 mouse_genomes_project 5 33248736 33282721 + MGP_129S1SvImJ_P0071232 Rgs12 protein_coding protein_coding MGP_129S1SvImJ_T0071233.1 MGP_129S1SvImJ_G0029473.1 mouse_genomes_project 5 33249157 33300654 + MGP_129S1SvImJ_P0071233 Rgs12 protein_coding protein_coding MGP_129S1SvImJ_T0071234.1 MGP_129S1SvImJ_G0029473.1 mouse_genomes_project 5 33249423 33293002 + MGP_129S1SvImJ_P0071234 Rgs12 protein_coding protein_coding MGP_129S1SvImJ_T0071235.1 MGP_129S1SvImJ_G0029473.1 mouse_genomes_project 5 33258665 33293140 + MGP_129S1SvImJ_P0071235 Rgs12 protein_coding protein_coding MGP_129S1SvImJ_T0071236.1 MGP_129S1SvImJ_G0029473.1 mouse_genomes_project 5 33258792 33300654 + MGP_129S1SvImJ_P0071236 Rgs12 protein_coding protein_coding MGP_129S1SvImJ_T0071237.1 MGP_129S1SvImJ_G0029473.1 mouse_genomes_project 5 33279661 33282211 + Rgs12 protein_coding retained_intron MGP_129S1SvImJ_T0071239.1 MGP_129S1SvImJ_G0029473.1 mouse_genomes_project 5 33282379 33283885 + Rgs12 protein_coding retained_intron MGP_129S1SvImJ_T0071240.1 MGP_129S1SvImJ_G0029473.1 mouse_genomes_project 5 33283889 33289639 + MGP_129S1SvImJ_P0071240 Rgs12 protein_coding protein_coding MGP_129S1SvImJ_T0071241.1 MGP_129S1SvImJ_G0029473.1 mouse_genomes_project 5 33286451 33291601 + Rgs12 protein_coding processed_transcript MGP_129S1SvImJ_T0071242.1 MGP_129S1SvImJ_G0029473.1 mouse_genomes_project 5 33286518 33300655 + MGP_129S1SvImJ_P0071242 Rgs12 protein_coding protein_coding MGP_129S1SvImJ_T0010750.1 MGP_129S1SvImJ_G0008866.1 mouse_genomes_project 5 142961142 142961224 - Mir106b miRNA miRNA MGP_129S1SvImJ_T0098945.1 MGP_129S1SvImJ_G0037023.1 mouse_genomes_project 5 1751961 1753880 - Gm43111 sense_intronic sense_intronic MGP_129S1SvImJ_T0071776.1 MGP_129S1SvImJ_G0029568.1 mouse_genomes_project 5 64531553 64541910 - MGP_129S1SvImJ_P0071776 Tlr1 protein_coding protein_coding MGP_129S1SvImJ_T0071777.1 MGP_129S1SvImJ_G0029568.1 mouse_genomes_project 5 64531554 64541110 - MGP_129S1SvImJ_P0071777 Tlr1 protein_coding protein_coding MGP_129S1SvImJ_T0071778.1 MGP_129S1SvImJ_G0029568.1 mouse_genomes_project 5 64541292 64541912 - Tlr1 protein_coding processed_transcript MGP_129S1SvImJ_T0098941.1 MGP_129S1SvImJ_G0037019.1 mouse_genomes_project 5 357127 357879 + Gm43017 sense_intronic sense_intronic MGP_129S1SvImJ_T0076106.1 MGP_129S1SvImJ_G0030415.1 mouse_genomes_project 5 157019598 157190019 - MGP_129S1SvImJ_P0076106 Stard13 protein_coding protein_coding MGP_129S1SvImJ_T0076107.1 MGP_129S1SvImJ_G0030415.1 mouse_genomes_project 5 157021626 157189919 - MGP_129S1SvImJ_P0076107 Stard13 protein_coding protein_coding MGP_129S1SvImJ_T0076108.1 MGP_129S1SvImJ_G0030415.1 mouse_genomes_project 5 157045424 157190025 - Stard13 protein_coding processed_transcript MGP_129S1SvImJ_T0076109.1 MGP_129S1SvImJ_G0030415.1 mouse_genomes_project 5 157045525 157075981 - Stard13 protein_coding processed_transcript MGP_129S1SvImJ_T0076111.1 MGP_129S1SvImJ_G0030415.1 mouse_genomes_project 5 157045528 157235438 - MGP_129S1SvImJ_P0076111 Stard13 protein_coding protein_coding MGP_129S1SvImJ_T0076112.1 MGP_129S1SvImJ_G0030415.1 mouse_genomes_project 5 157045575 157082973 - Stard13 protein_coding processed_transcript MGP_129S1SvImJ_T0076113.1 MGP_129S1SvImJ_G0030415.1 mouse_genomes_project 5 157057881 157189975 - Stard13 protein_coding retained_intron MGP_129S1SvImJ_T0076114.1 MGP_129S1SvImJ_G0030415.1 mouse_genomes_project 5 157059921 157235500 - MGP_129S1SvImJ_P0076114 Stard13 protein_coding protein_coding MGP_129S1SvImJ_T0076115.1 MGP_129S1SvImJ_G0030415.1 mouse_genomes_project 5 157082646 157097911 - Stard13 protein_coding processed_transcript MGP_129S1SvImJ_T0008169.1 MGP_129S1SvImJ_G0006661.1 mouse_genomes_project 5 72415118 72416023 - AU023070 lincRNA lincRNA MGP_129S1SvImJ_T0072149.1 MGP_129S1SvImJ_G0029632.1 mouse_genomes_project 5 74271903 74620296 - MGP_129S1SvImJ_P0072149 Scfd2 protein_coding protein_coding MGP_129S1SvImJ_T0072150.1 MGP_129S1SvImJ_G0029632.1 mouse_genomes_project 5 74272166 74362166 - Scfd2 protein_coding processed_transcript MGP_129S1SvImJ_T0072151.1 MGP_129S1SvImJ_G0029632.1 mouse_genomes_project 5 74274852 74295554 - Scfd2 protein_coding retained_intron MGP_129S1SvImJ_T0072152.1 MGP_129S1SvImJ_G0029632.1 mouse_genomes_project 5 74274855 74620299 - MGP_129S1SvImJ_P0072152 Scfd2 protein_coding protein_coding MGP_129S1SvImJ_T0072153.1 MGP_129S1SvImJ_G0029632.1 mouse_genomes_project 5 74474846 74477495 - MGP_129S1SvImJ_P0072153 Scfd2 protein_coding protein_coding MGP_129S1SvImJ_T0072154.1 MGP_129S1SvImJ_G0029632.1 mouse_genomes_project 5 74531340 74620276 - MGP_129S1SvImJ_P0072154 Scfd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072155.1 MGP_129S1SvImJ_G0029632.1 mouse_genomes_project 5 74539889 74620306 - MGP_129S1SvImJ_P0072155 Scfd2 protein_coding protein_coding MGP_129S1SvImJ_T0072156.1 MGP_129S1SvImJ_G0029632.1 mouse_genomes_project 5 74542002 74565055 - Scfd2 protein_coding retained_intron MGP_129S1SvImJ_T0072157.1 MGP_129S1SvImJ_G0029632.1 mouse_genomes_project 5 74599378 74620289 - Scfd2 protein_coding processed_transcript MGP_129S1SvImJ_T0015058.1 MGP_129S1SvImJ_G0013147.1 mouse_genomes_project 5 77482924 77483497 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001560.1 MGP_129S1SvImJ_G0001478.1 mouse_genomes_project 5 43325143 43327160 - TEC TEC MGP_129S1SvImJ_T0008459.1 MGP_129S1SvImJ_G0006865.1 mouse_genomes_project 5 154594610 154616186 + Gm15407 lincRNA lincRNA MGP_129S1SvImJ_T0001860.1 MGP_129S1SvImJ_G0001774.1 mouse_genomes_project 5 133610348 133611287 - TEC TEC MGP_129S1SvImJ_T0073922.1 MGP_129S1SvImJ_G0030013.1 mouse_genomes_project 5 124137408 124156652 - MGP_129S1SvImJ_P0073922 Oas2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0073923.1 MGP_129S1SvImJ_G0030013.1 mouse_genomes_project 5 124137415 124156732 - MGP_129S1SvImJ_P0073923 Oas2 protein_coding protein_coding MGP_129S1SvImJ_T0073924.1 MGP_129S1SvImJ_G0030013.1 mouse_genomes_project 5 124137418 124142660 - Oas2 protein_coding retained_intron MGP_129S1SvImJ_T0073925.1 MGP_129S1SvImJ_G0030013.1 mouse_genomes_project 5 124140368 124145484 - MGP_129S1SvImJ_P0073925 Oas2 protein_coding protein_coding MGP_129S1SvImJ_T0075646.1 MGP_129S1SvImJ_G0030323.1 mouse_genomes_project 5 148500421 148524964 + MGP_129S1SvImJ_P0075646 Spdye4b protein_coding protein_coding MGP_129S1SvImJ_T0075647.1 MGP_129S1SvImJ_G0030323.1 mouse_genomes_project 5 148500888 148524200 + MGP_129S1SvImJ_P0075647 Spdye4b protein_coding protein_coding MGP_129S1SvImJ_T0075648.1 MGP_129S1SvImJ_G0030323.1 mouse_genomes_project 5 148513480 148524200 + Spdye4b protein_coding processed_transcript MGP_129S1SvImJ_T0075649.1 MGP_129S1SvImJ_G0030323.1 mouse_genomes_project 5 148513485 148524053 + Spdye4b protein_coding processed_transcript MGP_129S1SvImJ_T0015156.1 MGP_129S1SvImJ_G0013245.1 mouse_genomes_project 5 117672727 117673063 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0071090.1 MGP_129S1SvImJ_G0029454.1 mouse_genomes_project 5 32027953 32106371 + MGP_129S1SvImJ_P0071090 Whsc1 protein_coding protein_coding MGP_129S1SvImJ_T0071091.1 MGP_129S1SvImJ_G0029454.1 mouse_genomes_project 5 32027972 32080907 + MGP_129S1SvImJ_P0071091 Whsc1 protein_coding protein_coding MGP_129S1SvImJ_T0071092.1 MGP_129S1SvImJ_G0029454.1 mouse_genomes_project 5 32028057 32054547 + MGP_129S1SvImJ_P0071092 Whsc1 protein_coding protein_coding MGP_129S1SvImJ_T0071093.1 MGP_129S1SvImJ_G0029454.1 mouse_genomes_project 5 32051476 32106371 + MGP_129S1SvImJ_P0071093 Whsc1 protein_coding protein_coding MGP_129S1SvImJ_T0071094.1 MGP_129S1SvImJ_G0029454.1 mouse_genomes_project 5 32051476 32106380 + MGP_129S1SvImJ_P0071094 Whsc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071095.1 MGP_129S1SvImJ_G0029454.1 mouse_genomes_project 5 32051476 32085687 + MGP_129S1SvImJ_P0071095 Whsc1 protein_coding protein_coding MGP_129S1SvImJ_T0071096.1 MGP_129S1SvImJ_G0029454.1 mouse_genomes_project 5 32051476 32106380 + MGP_129S1SvImJ_P0071096 Whsc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071097.1 MGP_129S1SvImJ_G0029454.1 mouse_genomes_project 5 32051505 32104117 + MGP_129S1SvImJ_P0071097 Whsc1 protein_coding protein_coding MGP_129S1SvImJ_T0071098.1 MGP_129S1SvImJ_G0029454.1 mouse_genomes_project 5 32051560 32103900 + MGP_129S1SvImJ_P0071098 Whsc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071099.1 MGP_129S1SvImJ_G0029454.1 mouse_genomes_project 5 32069494 32085695 + MGP_129S1SvImJ_P0071099 Whsc1 protein_coding protein_coding MGP_129S1SvImJ_T0071100.1 MGP_129S1SvImJ_G0029454.1 mouse_genomes_project 5 32086619 32088485 + Whsc1 protein_coding retained_intron MGP_129S1SvImJ_T0071101.1 MGP_129S1SvImJ_G0029454.1 mouse_genomes_project 5 32087555 32103831 + MGP_129S1SvImJ_P0071101 Whsc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071102.1 MGP_129S1SvImJ_G0029454.1 mouse_genomes_project 5 32093888 32100079 + Whsc1 protein_coding retained_intron MGP_129S1SvImJ_T0071103.1 MGP_129S1SvImJ_G0029454.1 mouse_genomes_project 5 32093902 32096108 + Whsc1 protein_coding retained_intron MGP_129S1SvImJ_T0071104.1 MGP_129S1SvImJ_G0029454.1 mouse_genomes_project 5 32100309 32103500 + Whsc1 protein_coding retained_intron MGP_129S1SvImJ_T0072377.1 MGP_129S1SvImJ_G0029670.1 mouse_genomes_project 5 87328979 87367480 - MGP_129S1SvImJ_P0072377 Tmprss11g protein_coding protein_coding MGP_129S1SvImJ_T0072378.1 MGP_129S1SvImJ_G0029670.1 mouse_genomes_project 5 87329470 87367451 - MGP_129S1SvImJ_P0072378 Tmprss11g protein_coding protein_coding MGP_129S1SvImJ_T0072379.1 MGP_129S1SvImJ_G0029670.1 mouse_genomes_project 5 87331458 87333743 - Tmprss11g protein_coding retained_intron MGP_129S1SvImJ_T0072761.1 MGP_129S1SvImJ_G0029774.1 mouse_genomes_project 5 99687745 100178389 + MGP_129S1SvImJ_P0072761 1700007G11Rik protein_coding protein_coding MGP_129S1SvImJ_T0072762.1 MGP_129S1SvImJ_G0029774.1 mouse_genomes_project 5 99687792 99706287 + 1700007G11Rik protein_coding processed_transcript MGP_129S1SvImJ_T0072763.1 MGP_129S1SvImJ_G0029774.1 mouse_genomes_project 5 99687797 99706682 + 1700007G11Rik protein_coding processed_transcript MGP_129S1SvImJ_T0072764.1 MGP_129S1SvImJ_G0029774.1 mouse_genomes_project 5 99687811 100178417 + MGP_129S1SvImJ_P0072764 1700007G11Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0001789.1 MGP_129S1SvImJ_G0001704.1 mouse_genomes_project 5 115971067 115972267 - TEC TEC MGP_129S1SvImJ_T0010685.1 MGP_129S1SvImJ_G0008801.1 mouse_genomes_project 5 20902647 20902693 - Gm28022 miRNA miRNA MGP_129S1SvImJ_T0073507.1 MGP_129S1SvImJ_G0029932.1 mouse_genomes_project 5 116843759 116852701 + MGP_129S1SvImJ_P0073507 Ung protein_coding protein_coding MGP_129S1SvImJ_T0073508.1 MGP_129S1SvImJ_G0029932.1 mouse_genomes_project 5 116844602 116852705 + MGP_129S1SvImJ_P0073508 Ung protein_coding protein_coding MGP_129S1SvImJ_T0073509.1 MGP_129S1SvImJ_G0029932.1 mouse_genomes_project 5 116844602 116851754 + MGP_129S1SvImJ_P0073509 Ung protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073510.1 MGP_129S1SvImJ_G0029932.1 mouse_genomes_project 5 116845381 116851679 + MGP_129S1SvImJ_P0073510 Ung protein_coding protein_coding MGP_129S1SvImJ_T0073511.1 MGP_129S1SvImJ_G0029932.1 mouse_genomes_project 5 116845453 116848554 + Ung protein_coding retained_intron MGP_129S1SvImJ_T0001889.1 MGP_129S1SvImJ_G0001803.1 mouse_genomes_project 5 136697585 136698859 - TEC TEC MGP_129S1SvImJ_T0014926.1 MGP_129S1SvImJ_G0013015.1 mouse_genomes_project 5 22910180 22910746 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001701.1 MGP_129S1SvImJ_G0001617.1 mouse_genomes_project 5 72500905 72503344 - TEC TEC MGP_129S1SvImJ_T0072975.1 MGP_129S1SvImJ_G0029826.1 mouse_genomes_project 5 107408912 107508185 + MGP_129S1SvImJ_P0072975 Lrrc8c protein_coding protein_coding MGP_129S1SvImJ_T0072976.1 MGP_129S1SvImJ_G0029826.1 mouse_genomes_project 5 107408940 107474797 + MGP_129S1SvImJ_P0072976 Lrrc8c protein_coding protein_coding MGP_129S1SvImJ_T0072977.1 MGP_129S1SvImJ_G0029826.1 mouse_genomes_project 5 107408997 107435321 + Lrrc8c protein_coding retained_intron MGP_129S1SvImJ_T0072978.1 MGP_129S1SvImJ_G0029826.1 mouse_genomes_project 5 107449533 107502049 + MGP_129S1SvImJ_P0072978 Lrrc8c protein_coding protein_coding MGP_129S1SvImJ_T0073633.1 MGP_129S1SvImJ_G0029956.1 mouse_genomes_project 5 117926454 117927060 - MGP_129S1SvImJ_P0073633 Gm10401 protein_coding protein_coding MGP_129S1SvImJ_T0004804.1 MGP_129S1SvImJ_G0004148.1 mouse_genomes_project 5 117719251 117725845 - Gm13822 antisense antisense MGP_129S1SvImJ_T0101199.1 MGP_129S1SvImJ_G0039266.1 mouse_genomes_project 5 84321239 84321371 - Gm25765 snoRNA snoRNA MGP_129S1SvImJ_T0008047.1 MGP_129S1SvImJ_G0006573.1 mouse_genomes_project 5 2475576 2478731 + lincRNA lincRNA MGP_129S1SvImJ_T0014961.1 MGP_129S1SvImJ_G0013050.1 mouse_genomes_project 5 31956598 31956769 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001615.1 MGP_129S1SvImJ_G0001532.1 mouse_genomes_project 5 51131751 51133137 - TEC TEC MGP_129S1SvImJ_T0071767.1 MGP_129S1SvImJ_G0029567.1 mouse_genomes_project 5 64405137 64434642 + MGP_129S1SvImJ_P0071767 Klf3 protein_coding protein_coding MGP_129S1SvImJ_T0071768.1 MGP_129S1SvImJ_G0029567.1 mouse_genomes_project 5 64405326 64424855 + Klf3 protein_coding retained_intron MGP_129S1SvImJ_T0071769.1 MGP_129S1SvImJ_G0029567.1 mouse_genomes_project 5 64405371 64423918 + Klf3 protein_coding processed_transcript MGP_129S1SvImJ_T0071770.1 MGP_129S1SvImJ_G0029567.1 mouse_genomes_project 5 64414092 64431227 + MGP_129S1SvImJ_P0071770 Klf3 protein_coding protein_coding MGP_129S1SvImJ_T0071771.1 MGP_129S1SvImJ_G0029567.1 mouse_genomes_project 5 64414093 64421074 + Klf3 protein_coding retained_intron MGP_129S1SvImJ_T0071772.1 MGP_129S1SvImJ_G0029567.1 mouse_genomes_project 5 64414137 64423989 + MGP_129S1SvImJ_P0071772 Klf3 protein_coding protein_coding MGP_129S1SvImJ_T0071773.1 MGP_129S1SvImJ_G0029567.1 mouse_genomes_project 5 64417602 64427174 + Klf3 protein_coding retained_intron MGP_129S1SvImJ_T0071774.1 MGP_129S1SvImJ_G0029567.1 mouse_genomes_project 5 64424093 64428912 + MGP_129S1SvImJ_P0071774 Klf3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071775.1 MGP_129S1SvImJ_G0029567.1 mouse_genomes_project 5 64428553 64431295 + MGP_129S1SvImJ_P0071775 Klf3 protein_coding protein_coding MGP_129S1SvImJ_T0008048.1 MGP_129S1SvImJ_G0006574.1 mouse_genomes_project 5 2712225 2713920 + Gm14145 lincRNA lincRNA MGP_129S1SvImJ_T0073297.1 MGP_129S1SvImJ_G0029891.1 mouse_genomes_project 5 113139030 113248884 - MGP_129S1SvImJ_P0073297 Ep400 protein_coding protein_coding MGP_129S1SvImJ_T0073298.1 MGP_129S1SvImJ_G0029891.1 mouse_genomes_project 5 113139030 113249074 - MGP_129S1SvImJ_P0073298 Ep400 protein_coding protein_coding MGP_129S1SvImJ_T0073299.1 MGP_129S1SvImJ_G0029891.1 mouse_genomes_project 5 113139035 113249074 - MGP_129S1SvImJ_P0073299 Ep400 protein_coding protein_coding MGP_129S1SvImJ_T0073300.1 MGP_129S1SvImJ_G0029891.1 mouse_genomes_project 5 113142027 113142846 - Ep400 protein_coding processed_transcript MGP_129S1SvImJ_T0073301.1 MGP_129S1SvImJ_G0029891.1 mouse_genomes_project 5 113142191 113143466 - Ep400 protein_coding retained_intron MGP_129S1SvImJ_T0073302.1 MGP_129S1SvImJ_G0029891.1 mouse_genomes_project 5 113163751 113168963 - Ep400 protein_coding retained_intron MGP_129S1SvImJ_T0073303.1 MGP_129S1SvImJ_G0029891.1 mouse_genomes_project 5 113172754 113175916 - Ep400 protein_coding retained_intron MGP_129S1SvImJ_T0073304.1 MGP_129S1SvImJ_G0029891.1 mouse_genomes_project 5 113174133 113184725 - MGP_129S1SvImJ_P0073304 Ep400 protein_coding protein_coding MGP_129S1SvImJ_T0073305.1 MGP_129S1SvImJ_G0029891.1 mouse_genomes_project 5 113214226 113248942 - MGP_129S1SvImJ_P0073305 Ep400 protein_coding protein_coding MGP_129S1SvImJ_T0073306.1 MGP_129S1SvImJ_G0029891.1 mouse_genomes_project 5 113214620 113248512 - MGP_129S1SvImJ_P0073306 Ep400 protein_coding protein_coding MGP_129S1SvImJ_T0073307.1 MGP_129S1SvImJ_G0029891.1 mouse_genomes_project 5 113234831 113249074 - Ep400 protein_coding processed_transcript MGP_129S1SvImJ_T0075410.1 MGP_129S1SvImJ_G0030275.1 mouse_genomes_project 5 143953777 144076853 - MGP_129S1SvImJ_P0075410 Prkar1b protein_coding protein_coding MGP_129S1SvImJ_T0075411.1 MGP_129S1SvImJ_G0030275.1 mouse_genomes_project 5 143953779 144077480 - MGP_129S1SvImJ_P0075411 Prkar1b protein_coding protein_coding MGP_129S1SvImJ_T0075412.1 MGP_129S1SvImJ_G0030275.1 mouse_genomes_project 5 143953780 144076823 - MGP_129S1SvImJ_P0075412 Prkar1b protein_coding protein_coding MGP_129S1SvImJ_T0075413.1 MGP_129S1SvImJ_G0030275.1 mouse_genomes_project 5 143955137 143960282 - Prkar1b protein_coding processed_transcript MGP_129S1SvImJ_T0075414.1 MGP_129S1SvImJ_G0030275.1 mouse_genomes_project 5 143982324 144074919 - MGP_129S1SvImJ_P0075414 Prkar1b protein_coding protein_coding MGP_129S1SvImJ_T0075415.1 MGP_129S1SvImJ_G0030275.1 mouse_genomes_project 5 143990486 144077253 - MGP_129S1SvImJ_P0075415 Prkar1b protein_coding protein_coding MGP_129S1SvImJ_T0075416.1 MGP_129S1SvImJ_G0030275.1 mouse_genomes_project 5 144002590 144058735 - MGP_129S1SvImJ_P0075416 Prkar1b protein_coding protein_coding MGP_129S1SvImJ_T0075417.1 MGP_129S1SvImJ_G0030275.1 mouse_genomes_project 5 144054574 144077670 - MGP_129S1SvImJ_P0075417 Prkar1b protein_coding protein_coding MGP_129S1SvImJ_T0075418.1 MGP_129S1SvImJ_G0030275.1 mouse_genomes_project 5 144054601 144098319 - MGP_129S1SvImJ_P0075418 Prkar1b protein_coding protein_coding MGP_129S1SvImJ_T0075419.1 MGP_129S1SvImJ_G0030275.1 mouse_genomes_project 5 144054667 144077477 - MGP_129S1SvImJ_P0075419 Prkar1b protein_coding protein_coding MGP_129S1SvImJ_T0075420.1 MGP_129S1SvImJ_G0030275.1 mouse_genomes_project 5 144096371 144098275 - Prkar1b protein_coding processed_transcript MGP_129S1SvImJ_T0001816.1 MGP_129S1SvImJ_G0001731.1 mouse_genomes_project 5 122871413 122873787 - TEC TEC MGP_129S1SvImJ_T0071755.1 MGP_129S1SvImJ_G0029565.1 mouse_genomes_project 5 63660432 63699457 + MGP_129S1SvImJ_P0071755 Pgm1 protein_coding protein_coding MGP_129S1SvImJ_T0071756.1 MGP_129S1SvImJ_G0029565.1 mouse_genomes_project 5 63672490 63682229 + MGP_129S1SvImJ_P0071756 Pgm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071757.1 MGP_129S1SvImJ_G0029565.1 mouse_genomes_project 5 63678068 63679945 + Pgm1 protein_coding retained_intron MGP_129S1SvImJ_T0071758.1 MGP_129S1SvImJ_G0029565.1 mouse_genomes_project 5 63684882 63699270 + MGP_129S1SvImJ_P0071758 Pgm1 protein_coding protein_coding MGP_129S1SvImJ_T0101920.1 MGP_129S1SvImJ_G0039826.1 mouse_genomes_project 5 30814018 30837056 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0071476.1 MGP_129S1SvImJ_G0029515.1 mouse_genomes_project 5 37141053 37318586 - MGP_129S1SvImJ_P0071476 Clnk protein_coding protein_coding MGP_129S1SvImJ_T0071477.1 MGP_129S1SvImJ_G0029515.1 mouse_genomes_project 5 37141053 37318586 - MGP_129S1SvImJ_P0071477 Clnk protein_coding protein_coding MGP_129S1SvImJ_T0015190.1 MGP_129S1SvImJ_G0013279.1 mouse_genomes_project 5 141946459 141948575 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004737.1 MGP_129S1SvImJ_G0004102.1 mouse_genomes_project 5 75273258 75273857 - Gm42802 antisense antisense MGP_129S1SvImJ_T0071208.1 MGP_129S1SvImJ_G0029469.1 mouse_genomes_project 5 32885581 32909276 - MGP_129S1SvImJ_P0071208 Nop14 protein_coding protein_coding MGP_129S1SvImJ_T0071209.1 MGP_129S1SvImJ_G0029469.1 mouse_genomes_project 5 32888372 32894931 - MGP_129S1SvImJ_P0071209 Nop14 protein_coding protein_coding MGP_129S1SvImJ_T0071210.1 MGP_129S1SvImJ_G0029469.1 mouse_genomes_project 5 32891734 32896195 - Nop14 protein_coding retained_intron MGP_129S1SvImJ_T0004860.1 MGP_129S1SvImJ_G0004186.1 mouse_genomes_project 5 131193452 131213537 - Tmem132cos antisense antisense MGP_129S1SvImJ_T0004861.1 MGP_129S1SvImJ_G0004186.1 mouse_genomes_project 5 131193468 131213497 - Tmem132cos antisense antisense MGP_129S1SvImJ_T0004862.1 MGP_129S1SvImJ_G0004186.1 mouse_genomes_project 5 131193530 131213500 - Tmem132cos antisense antisense MGP_129S1SvImJ_T0008266.1 MGP_129S1SvImJ_G0006736.1 mouse_genomes_project 5 108425395 108430602 - Gm26872 lincRNA lincRNA MGP_129S1SvImJ_T0004723.1 MGP_129S1SvImJ_G0004090.1 mouse_genomes_project 5 66749755 66750306 - Gm15949 antisense antisense MGP_129S1SvImJ_T0075380.1 MGP_129S1SvImJ_G0030269.1 mouse_genomes_project 5 143310793 143331358 + MGP_129S1SvImJ_P0075380 Zfp157 protein_coding protein_coding MGP_129S1SvImJ_T0075381.1 MGP_129S1SvImJ_G0030269.1 mouse_genomes_project 5 143310804 143318844 + Zfp157 protein_coding retained_intron MGP_129S1SvImJ_T0075382.1 MGP_129S1SvImJ_G0030269.1 mouse_genomes_project 5 143310832 143317874 + Zfp157 protein_coding retained_intron MGP_129S1SvImJ_T0075383.1 MGP_129S1SvImJ_G0030269.1 mouse_genomes_project 5 143310836 143318890 + Zfp157 protein_coding retained_intron MGP_129S1SvImJ_T0075384.1 MGP_129S1SvImJ_G0030269.1 mouse_genomes_project 5 143310844 143326971 + MGP_129S1SvImJ_P0075384 Zfp157 protein_coding protein_coding MGP_129S1SvImJ_T0075385.1 MGP_129S1SvImJ_G0030269.1 mouse_genomes_project 5 143310865 143326983 + MGP_129S1SvImJ_P0075385 Zfp157 protein_coding protein_coding MGP_129S1SvImJ_T0099920.1 MGP_129S1SvImJ_G0037987.1 mouse_genomes_project 5 59960581 59960689 - Gm23331 snRNA snRNA MGP_129S1SvImJ_T0075715.1 MGP_129S1SvImJ_G0030339.1 mouse_genomes_project 5 149204973 149212115 - MGP_129S1SvImJ_P0075715 Aimp2 protein_coding protein_coding MGP_129S1SvImJ_T0075716.1 MGP_129S1SvImJ_G0030339.1 mouse_genomes_project 5 149204973 149212107 - MGP_129S1SvImJ_P0075716 Aimp2 protein_coding protein_coding MGP_129S1SvImJ_T0075717.1 MGP_129S1SvImJ_G0030339.1 mouse_genomes_project 5 149208357 149212052 - Aimp2 protein_coding retained_intron MGP_129S1SvImJ_T0075718.1 MGP_129S1SvImJ_G0030339.1 mouse_genomes_project 5 149208642 149212056 - Aimp2 protein_coding retained_intron MGP_129S1SvImJ_T0073843.1 MGP_129S1SvImJ_G0029995.1 mouse_genomes_project 5 121347736 121403752 - MGP_129S1SvImJ_P0073843 Rnft2 protein_coding protein_coding MGP_129S1SvImJ_T0073844.1 MGP_129S1SvImJ_G0029995.1 mouse_genomes_project 5 121347742 121404007 - MGP_129S1SvImJ_P0073844 Rnft2 protein_coding protein_coding MGP_129S1SvImJ_T0073845.1 MGP_129S1SvImJ_G0029995.1 mouse_genomes_project 5 121350631 121388147 - Rnft2 protein_coding retained_intron MGP_129S1SvImJ_T0073846.1 MGP_129S1SvImJ_G0029995.1 mouse_genomes_project 5 121351113 121360243 - MGP_129S1SvImJ_P0073846 Rnft2 protein_coding protein_coding MGP_129S1SvImJ_T0073847.1 MGP_129S1SvImJ_G0029995.1 mouse_genomes_project 5 121393029 121403885 - MGP_129S1SvImJ_P0073847 Rnft2 protein_coding protein_coding MGP_129S1SvImJ_T0073848.1 MGP_129S1SvImJ_G0029995.1 mouse_genomes_project 5 121395800 121401804 - Rnft2 protein_coding retained_intron MGP_129S1SvImJ_T0073849.1 MGP_129S1SvImJ_G0029995.1 mouse_genomes_project 5 121396378 121403883 - MGP_129S1SvImJ_P0073849 Rnft2 protein_coding protein_coding MGP_129S1SvImJ_T0001482.1 MGP_129S1SvImJ_G0001403.1 mouse_genomes_project 5 12097157 12098820 + TEC TEC MGP_129S1SvImJ_T0015074.1 MGP_129S1SvImJ_G0013163.1 mouse_genomes_project 5 88081343 88082895 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001609.1 MGP_129S1SvImJ_G0001526.1 mouse_genomes_project 5 50806269 50809773 - TEC TEC MGP_129S1SvImJ_T0098614.1 MGP_129S1SvImJ_G0036699.1 mouse_genomes_project 5 155101910 155102016 - n-R5s180 rRNA rRNA MGP_129S1SvImJ_T0101224.1 MGP_129S1SvImJ_G0039291.1 mouse_genomes_project 5 154955683 154955781 + Gm23362 snoRNA snoRNA MGP_129S1SvImJ_T0014875.1 MGP_129S1SvImJ_G0012964.1 mouse_genomes_project 5 6380881 6381123 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001653.1 MGP_129S1SvImJ_G0001569.1 mouse_genomes_project 5 65117313 65118870 - TEC TEC MGP_129S1SvImJ_T0070926.1 MGP_129S1SvImJ_G0029429.1 mouse_genomes_project 5 29549303 29551728 + Slc4a1ap protein_coding retained_intron MGP_129S1SvImJ_T0070927.1 MGP_129S1SvImJ_G0029429.1 mouse_genomes_project 5 29549303 29579487 + MGP_129S1SvImJ_P0070927 Slc4a1ap protein_coding protein_coding MGP_129S1SvImJ_T0070928.1 MGP_129S1SvImJ_G0029429.1 mouse_genomes_project 5 29549305 29556772 + Slc4a1ap protein_coding retained_intron MGP_129S1SvImJ_T0070929.1 MGP_129S1SvImJ_G0029429.1 mouse_genomes_project 5 29549305 29579793 + MGP_129S1SvImJ_P0070929 Slc4a1ap protein_coding protein_coding MGP_129S1SvImJ_T0070930.1 MGP_129S1SvImJ_G0029429.1 mouse_genomes_project 5 29549320 29579492 + MGP_129S1SvImJ_P0070930 Slc4a1ap protein_coding protein_coding MGP_129S1SvImJ_T0070931.1 MGP_129S1SvImJ_G0029429.1 mouse_genomes_project 5 29549320 29559168 + MGP_129S1SvImJ_P0070931 Slc4a1ap protein_coding protein_coding MGP_129S1SvImJ_T0070932.1 MGP_129S1SvImJ_G0029429.1 mouse_genomes_project 5 29549909 29554551 + Slc4a1ap protein_coding retained_intron MGP_129S1SvImJ_T0070933.1 MGP_129S1SvImJ_G0029429.1 mouse_genomes_project 5 29554295 29557313 + Slc4a1ap protein_coding retained_intron MGP_129S1SvImJ_T0070934.1 MGP_129S1SvImJ_G0029429.1 mouse_genomes_project 5 29558480 29579458 + MGP_129S1SvImJ_P0070934 Slc4a1ap protein_coding protein_coding MGP_129S1SvImJ_T0070935.1 MGP_129S1SvImJ_G0029429.1 mouse_genomes_project 5 29565955 29579488 + Slc4a1ap protein_coding retained_intron MGP_129S1SvImJ_T0070936.1 MGP_129S1SvImJ_G0029429.1 mouse_genomes_project 5 29566144 29579492 + MGP_129S1SvImJ_P0070936 Slc4a1ap protein_coding protein_coding MGP_129S1SvImJ_T0070937.1 MGP_129S1SvImJ_G0029429.1 mouse_genomes_project 5 29566222 29579417 + MGP_129S1SvImJ_P0070937 Slc4a1ap protein_coding protein_coding MGP_129S1SvImJ_T0070938.1 MGP_129S1SvImJ_G0029429.1 mouse_genomes_project 5 29573973 29582307 + Slc4a1ap protein_coding processed_transcript MGP_129S1SvImJ_T0099919.1 MGP_129S1SvImJ_G0037986.1 mouse_genomes_project 5 51310278 51310383 - Gm25601 snRNA snRNA MGP_129S1SvImJ_T0008327.1 MGP_129S1SvImJ_G0006771.1 mouse_genomes_project 5 118217346 118267631 + Gm13832 lincRNA lincRNA MGP_129S1SvImJ_T0008328.1 MGP_129S1SvImJ_G0006771.1 mouse_genomes_project 5 118217365 118299155 + Gm13832 lincRNA lincRNA MGP_129S1SvImJ_T0099922.1 MGP_129S1SvImJ_G0037989.1 mouse_genomes_project 5 65879889 65879996 - Gm22929 snRNA snRNA MGP_129S1SvImJ_T0008344.1 MGP_129S1SvImJ_G0006784.1 mouse_genomes_project 5 122147744 122160105 + Gm43342 lincRNA lincRNA MGP_129S1SvImJ_T0010716.1 MGP_129S1SvImJ_G0008832.1 mouse_genomes_project 5 93989849 93989961 - Mir1961 miRNA miRNA MGP_129S1SvImJ_T0001631.1 MGP_129S1SvImJ_G0001548.1 mouse_genomes_project 5 57236563 57238030 + TEC TEC MGP_129S1SvImJ_T0074536.1 MGP_129S1SvImJ_G0030112.1 mouse_genomes_project 5 129295270 129314763 + MGP_129S1SvImJ_P0074536 Bri3bp protein_coding protein_coding MGP_129S1SvImJ_T0074537.1 MGP_129S1SvImJ_G0030112.1 mouse_genomes_project 5 129295452 129309099 + MGP_129S1SvImJ_P0074537 Bri3bp protein_coding protein_coding MGP_129S1SvImJ_T0072086.1 MGP_129S1SvImJ_G0029620.1 mouse_genomes_project 5 72983620 72992250 + MGP_129S1SvImJ_P0072086 Slc10a4 protein_coding protein_coding MGP_129S1SvImJ_T0072088.1 MGP_129S1SvImJ_G0029620.1 mouse_genomes_project 5 72983640 72992250 + MGP_129S1SvImJ_P0072088 Slc10a4 protein_coding protein_coding MGP_129S1SvImJ_T0071290.1 MGP_129S1SvImJ_G0029484.1 mouse_genomes_project 5 34058141 34195367 + MGP_129S1SvImJ_P0071290 Ablim2 protein_coding protein_coding MGP_129S1SvImJ_T0071291.1 MGP_129S1SvImJ_G0029484.1 mouse_genomes_project 5 34058141 34195874 + MGP_129S1SvImJ_P0071291 Ablim2 protein_coding protein_coding MGP_129S1SvImJ_T0071292.1 MGP_129S1SvImJ_G0029484.1 mouse_genomes_project 5 34058185 34195050 + MGP_129S1SvImJ_P0071292 Ablim2 protein_coding protein_coding MGP_129S1SvImJ_T0071293.1 MGP_129S1SvImJ_G0029484.1 mouse_genomes_project 5 34058192 34195366 + MGP_129S1SvImJ_P0071293 Ablim2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071294.1 MGP_129S1SvImJ_G0029484.1 mouse_genomes_project 5 34058192 34195874 + MGP_129S1SvImJ_P0071294 Ablim2 protein_coding protein_coding MGP_129S1SvImJ_T0071295.1 MGP_129S1SvImJ_G0029484.1 mouse_genomes_project 5 34058227 34195367 + MGP_129S1SvImJ_P0071295 Ablim2 protein_coding protein_coding MGP_129S1SvImJ_T0071296.1 MGP_129S1SvImJ_G0029484.1 mouse_genomes_project 5 34058312 34194320 + MGP_129S1SvImJ_P0071296 Ablim2 protein_coding protein_coding MGP_129S1SvImJ_T0071297.1 MGP_129S1SvImJ_G0029484.1 mouse_genomes_project 5 34114618 34146153 + MGP_129S1SvImJ_P0071297 Ablim2 protein_coding protein_coding MGP_129S1SvImJ_T0071298.1 MGP_129S1SvImJ_G0029484.1 mouse_genomes_project 5 34114685 34194320 + MGP_129S1SvImJ_P0071298 Ablim2 protein_coding protein_coding MGP_129S1SvImJ_T0071299.1 MGP_129S1SvImJ_G0029484.1 mouse_genomes_project 5 34114699 34136056 + MGP_129S1SvImJ_P0071299 Ablim2 protein_coding protein_coding MGP_129S1SvImJ_T0071300.1 MGP_129S1SvImJ_G0029484.1 mouse_genomes_project 5 34128337 34185785 + MGP_129S1SvImJ_P0071300 Ablim2 protein_coding protein_coding MGP_129S1SvImJ_T0071301.1 MGP_129S1SvImJ_G0029484.1 mouse_genomes_project 5 34128368 34144481 + Ablim2 protein_coding retained_intron MGP_129S1SvImJ_T0071302.1 MGP_129S1SvImJ_G0029484.1 mouse_genomes_project 5 34128368 34164169 + MGP_129S1SvImJ_P0071302 Ablim2 protein_coding protein_coding MGP_129S1SvImJ_T0071303.1 MGP_129S1SvImJ_G0029484.1 mouse_genomes_project 5 34144302 34164496 + MGP_129S1SvImJ_P0071303 Ablim2 protein_coding protein_coding MGP_129S1SvImJ_T0071304.1 MGP_129S1SvImJ_G0029484.1 mouse_genomes_project 5 34155085 34178370 + Ablim2 protein_coding retained_intron MGP_129S1SvImJ_T0071305.1 MGP_129S1SvImJ_G0029484.1 mouse_genomes_project 5 34163375 34164496 + Ablim2 protein_coding retained_intron MGP_129S1SvImJ_T0071306.1 MGP_129S1SvImJ_G0029484.1 mouse_genomes_project 5 34164203 34194420 + MGP_129S1SvImJ_P0071306 Ablim2 protein_coding protein_coding MGP_129S1SvImJ_T0070239.1 MGP_129S1SvImJ_G0029300.1 mouse_genomes_project 5 14747451 14749321 + MGP_129S1SvImJ_P0070239 protein_coding protein_coding MGP_129S1SvImJ_T0001732.1 MGP_129S1SvImJ_G0001647.1 mouse_genomes_project 5 91901316 91904448 + TEC TEC MGP_129S1SvImJ_T0001621.1 MGP_129S1SvImJ_G0001538.1 mouse_genomes_project 5 54688767 54692367 + TEC TEC MGP_129S1SvImJ_T0071283.1 MGP_129S1SvImJ_G0029483.1 mouse_genomes_project 5 33997585 34029299 - MGP_129S1SvImJ_P0071283 Sh3tc1 protein_coding protein_coding MGP_129S1SvImJ_T0071284.1 MGP_129S1SvImJ_G0029483.1 mouse_genomes_project 5 33997593 34029573 - MGP_129S1SvImJ_P0071284 Sh3tc1 protein_coding protein_coding MGP_129S1SvImJ_T0071285.1 MGP_129S1SvImJ_G0029483.1 mouse_genomes_project 5 33997594 34024243 - MGP_129S1SvImJ_P0071285 Sh3tc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071286.1 MGP_129S1SvImJ_G0029483.1 mouse_genomes_project 5 33997596 34016548 - MGP_129S1SvImJ_P0071286 Sh3tc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071287.1 MGP_129S1SvImJ_G0029483.1 mouse_genomes_project 5 33997596 34040284 - MGP_129S1SvImJ_P0071287 Sh3tc1 protein_coding protein_coding MGP_129S1SvImJ_T0071288.1 MGP_129S1SvImJ_G0029483.1 mouse_genomes_project 5 33997598 34019535 - Sh3tc1 protein_coding retained_intron MGP_129S1SvImJ_T0071289.1 MGP_129S1SvImJ_G0029483.1 mouse_genomes_project 5 34023364 34029309 - Sh3tc1 protein_coding processed_transcript MGP_129S1SvImJ_T0015237.1 MGP_129S1SvImJ_G0013326.1 mouse_genomes_project 5 153570120 153570595 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014880.1 MGP_129S1SvImJ_G0012969.1 mouse_genomes_project 5 7827682 7827938 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070772.1 MGP_129S1SvImJ_G0029407.1 mouse_genomes_project 5 29024214 29051280 + MGP_129S1SvImJ_P0070772 Cad protein_coding protein_coding MGP_129S1SvImJ_T0070773.1 MGP_129S1SvImJ_G0029407.1 mouse_genomes_project 5 29024245 29040564 + MGP_129S1SvImJ_P0070773 Cad protein_coding protein_coding MGP_129S1SvImJ_T0070774.1 MGP_129S1SvImJ_G0029407.1 mouse_genomes_project 5 29024362 29051033 + MGP_129S1SvImJ_P0070774 Cad protein_coding protein_coding MGP_129S1SvImJ_T0070775.1 MGP_129S1SvImJ_G0029407.1 mouse_genomes_project 5 29024362 29051033 + MGP_129S1SvImJ_P0070775 Cad protein_coding protein_coding MGP_129S1SvImJ_T0070776.1 MGP_129S1SvImJ_G0029407.1 mouse_genomes_project 5 29024389 29050996 + MGP_129S1SvImJ_P0070776 Cad protein_coding protein_coding MGP_129S1SvImJ_T0070777.1 MGP_129S1SvImJ_G0029407.1 mouse_genomes_project 5 29028023 29029314 + Cad protein_coding retained_intron MGP_129S1SvImJ_T0070778.1 MGP_129S1SvImJ_G0029407.1 mouse_genomes_project 5 29031143 29039769 + Cad protein_coding retained_intron MGP_129S1SvImJ_T0070779.1 MGP_129S1SvImJ_G0029407.1 mouse_genomes_project 5 29039095 29039981 + Cad protein_coding processed_transcript MGP_129S1SvImJ_T0070780.1 MGP_129S1SvImJ_G0029407.1 mouse_genomes_project 5 29043156 29044995 + Cad protein_coding processed_transcript MGP_129S1SvImJ_T0070781.1 MGP_129S1SvImJ_G0029407.1 mouse_genomes_project 5 29043269 29045506 + Cad protein_coding retained_intron MGP_129S1SvImJ_T0070782.1 MGP_129S1SvImJ_G0029407.1 mouse_genomes_project 5 29043355 29045783 + Cad protein_coding retained_intron MGP_129S1SvImJ_T0070783.1 MGP_129S1SvImJ_G0029407.1 mouse_genomes_project 5 29045109 29046381 + Cad protein_coding retained_intron MGP_129S1SvImJ_T0070784.1 MGP_129S1SvImJ_G0029407.1 mouse_genomes_project 5 29046917 29048829 + MGP_129S1SvImJ_P0070784 Cad protein_coding protein_coding MGP_129S1SvImJ_T0070785.1 MGP_129S1SvImJ_G0029407.1 mouse_genomes_project 5 29048613 29049467 + Cad protein_coding retained_intron MGP_129S1SvImJ_T0070949.1 MGP_129S1SvImJ_G0029432.1 mouse_genomes_project 5 29733291 29770782 + MGP_129S1SvImJ_P0070949 Bre protein_coding protein_coding MGP_129S1SvImJ_T0070950.1 MGP_129S1SvImJ_G0029432.1 mouse_genomes_project 5 29733511 29771202 + Bre protein_coding retained_intron MGP_129S1SvImJ_T0070951.1 MGP_129S1SvImJ_G0029432.1 mouse_genomes_project 5 29733524 30141691 + MGP_129S1SvImJ_P0070951 Bre protein_coding protein_coding MGP_129S1SvImJ_T0070952.1 MGP_129S1SvImJ_G0029432.1 mouse_genomes_project 5 29733537 29747004 + Bre protein_coding processed_transcript MGP_129S1SvImJ_T0070953.1 MGP_129S1SvImJ_G0029432.1 mouse_genomes_project 5 29733547 30060693 + Bre protein_coding retained_intron MGP_129S1SvImJ_T0070954.1 MGP_129S1SvImJ_G0029432.1 mouse_genomes_project 5 29733555 29891974 + Bre protein_coding retained_intron MGP_129S1SvImJ_T0070955.1 MGP_129S1SvImJ_G0029432.1 mouse_genomes_project 5 29733571 30141584 + MGP_129S1SvImJ_P0070955 Bre protein_coding protein_coding MGP_129S1SvImJ_T0070956.1 MGP_129S1SvImJ_G0029432.1 mouse_genomes_project 5 29733591 30141476 + MGP_129S1SvImJ_P0070956 Bre protein_coding protein_coding MGP_129S1SvImJ_T0070957.1 MGP_129S1SvImJ_G0029432.1 mouse_genomes_project 5 29733591 30141476 + MGP_129S1SvImJ_P0070957 Bre protein_coding protein_coding MGP_129S1SvImJ_T0070958.1 MGP_129S1SvImJ_G0029432.1 mouse_genomes_project 5 29733591 30141476 + MGP_129S1SvImJ_P0070958 Bre protein_coding protein_coding MGP_129S1SvImJ_T0070959.1 MGP_129S1SvImJ_G0029432.1 mouse_genomes_project 5 29733592 29880220 + MGP_129S1SvImJ_P0070959 Bre protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070960.1 MGP_129S1SvImJ_G0029432.1 mouse_genomes_project 5 29737390 30114516 + MGP_129S1SvImJ_P0070960 Bre protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070961.1 MGP_129S1SvImJ_G0029432.1 mouse_genomes_project 5 29842888 29880301 + Bre protein_coding processed_transcript MGP_129S1SvImJ_T0070962.1 MGP_129S1SvImJ_G0029432.1 mouse_genomes_project 5 30102680 30141490 + Bre protein_coding processed_transcript MGP_129S1SvImJ_T0070963.1 MGP_129S1SvImJ_G0029432.1 mouse_genomes_project 5 30136458 30141483 + Bre protein_coding processed_transcript MGP_129S1SvImJ_T0098956.1 MGP_129S1SvImJ_G0037034.1 mouse_genomes_project 5 73200297 73202785 - Gm17207 sense_intronic sense_intronic MGP_129S1SvImJ_T0071439.1 MGP_129S1SvImJ_G0029509.1 mouse_genomes_project 5 36669040 36678460 + MGP_129S1SvImJ_P0071439 Tmem128 protein_coding protein_coding MGP_129S1SvImJ_T0071440.1 MGP_129S1SvImJ_G0029509.1 mouse_genomes_project 5 36669226 36671149 + Tmem128 protein_coding retained_intron MGP_129S1SvImJ_T0071441.1 MGP_129S1SvImJ_G0029509.1 mouse_genomes_project 5 36669239 36676764 + MGP_129S1SvImJ_P0071441 Tmem128 protein_coding protein_coding MGP_129S1SvImJ_T0071442.1 MGP_129S1SvImJ_G0029509.1 mouse_genomes_project 5 36669243 36674248 + Tmem128 protein_coding retained_intron MGP_129S1SvImJ_T0071443.1 MGP_129S1SvImJ_G0029509.1 mouse_genomes_project 5 36673754 36676761 + MGP_129S1SvImJ_P0071443 Tmem128 protein_coding protein_coding MGP_129S1SvImJ_T0010717.1 MGP_129S1SvImJ_G0008833.1 mouse_genomes_project 5 99849943 99850052 - Mir703 miRNA miRNA MGP_129S1SvImJ_T0004828.1 MGP_129S1SvImJ_G0004162.1 mouse_genomes_project 5 123434317 123452489 - Gm10390 antisense antisense MGP_129S1SvImJ_T0004829.1 MGP_129S1SvImJ_G0004162.1 mouse_genomes_project 5 123444712 123452491 - Gm10390 antisense antisense MGP_129S1SvImJ_T0072923.1 MGP_129S1SvImJ_G0029804.1 mouse_genomes_project 5 105518230 105542548 - MGP_129S1SvImJ_P0072923 Klhl8 protein_coding protein_coding MGP_129S1SvImJ_T0072924.1 MGP_129S1SvImJ_G0029804.1 mouse_genomes_project 5 105518230 105542548 - MGP_129S1SvImJ_P0072924 Klhl8 protein_coding protein_coding MGP_129S1SvImJ_T0072925.1 MGP_129S1SvImJ_G0029804.1 mouse_genomes_project 5 105518330 105567875 - MGP_129S1SvImJ_P0072925 Klhl8 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0072926.1 MGP_129S1SvImJ_G0029804.1 mouse_genomes_project 5 105518337 105542548 - MGP_129S1SvImJ_P0072926 Klhl8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072927.1 MGP_129S1SvImJ_G0029804.1 mouse_genomes_project 5 105526567 105530626 - Klhl8 protein_coding retained_intron MGP_129S1SvImJ_T0070883.1 MGP_129S1SvImJ_G0029422.1 mouse_genomes_project 5 29245816 29289213 - MGP_129S1SvImJ_P0070883 Ift172 protein_coding protein_coding MGP_129S1SvImJ_T0070884.1 MGP_129S1SvImJ_G0029422.1 mouse_genomes_project 5 29245819 29247193 - Ift172 protein_coding retained_intron MGP_129S1SvImJ_T0070885.1 MGP_129S1SvImJ_G0029422.1 mouse_genomes_project 5 29246092 29247350 - Ift172 protein_coding retained_intron MGP_129S1SvImJ_T0070886.1 MGP_129S1SvImJ_G0029422.1 mouse_genomes_project 5 29253064 29253830 - Ift172 protein_coding retained_intron MGP_129S1SvImJ_T0070887.1 MGP_129S1SvImJ_G0029422.1 mouse_genomes_project 5 29253938 29256507 - Ift172 protein_coding retained_intron MGP_129S1SvImJ_T0070888.1 MGP_129S1SvImJ_G0029422.1 mouse_genomes_project 5 29255415 29256215 - Ift172 protein_coding retained_intron MGP_129S1SvImJ_T0070889.1 MGP_129S1SvImJ_G0029422.1 mouse_genomes_project 5 29258922 29278440 - MGP_129S1SvImJ_P0070889 Ift172 protein_coding protein_coding MGP_129S1SvImJ_T0070890.1 MGP_129S1SvImJ_G0029422.1 mouse_genomes_project 5 29267041 29279461 - MGP_129S1SvImJ_P0070890 Ift172 protein_coding protein_coding MGP_129S1SvImJ_T0070891.1 MGP_129S1SvImJ_G0029422.1 mouse_genomes_project 5 29273530 29289145 - Ift172 protein_coding retained_intron MGP_129S1SvImJ_T0070892.1 MGP_129S1SvImJ_G0029422.1 mouse_genomes_project 5 29283471 29284584 - Ift172 protein_coding retained_intron MGP_129S1SvImJ_T0070893.1 MGP_129S1SvImJ_G0029422.1 mouse_genomes_project 5 29284111 29289222 - MGP_129S1SvImJ_P0070893 Ift172 protein_coding protein_coding MGP_129S1SvImJ_T0001671.1 MGP_129S1SvImJ_G0001587.1 mouse_genomes_project 5 66049599 66051555 - TEC TEC MGP_129S1SvImJ_T0015222.1 MGP_129S1SvImJ_G0013311.1 mouse_genomes_project 5 150835063 150835649 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001759.1 MGP_129S1SvImJ_G0001674.1 mouse_genomes_project 5 105536164 105536493 - TEC TEC MGP_129S1SvImJ_T0004760.1 MGP_129S1SvImJ_G0004119.1 mouse_genomes_project 5 101093452 101101363 + Gm16226 antisense antisense MGP_129S1SvImJ_T0004761.1 MGP_129S1SvImJ_G0004119.1 mouse_genomes_project 5 101093452 101128906 + Gm16226 antisense antisense MGP_129S1SvImJ_T0004762.1 MGP_129S1SvImJ_G0004119.1 mouse_genomes_project 5 101093457 101128908 + Gm16226 antisense antisense MGP_129S1SvImJ_T0004763.1 MGP_129S1SvImJ_G0004119.1 mouse_genomes_project 5 101093481 101128904 + Gm16226 antisense antisense MGP_129S1SvImJ_T0072946.1 MGP_129S1SvImJ_G0029812.1 mouse_genomes_project 5 105979571 105991870 + MGP_129S1SvImJ_P0072946 Ibsp protein_coding protein_coding MGP_129S1SvImJ_T0004883.1 MGP_129S1SvImJ_G0004204.1 mouse_genomes_project 5 142300506 142308794 + Gm17112 antisense antisense MGP_129S1SvImJ_T0074995.1 MGP_129S1SvImJ_G0030195.1 mouse_genomes_project 5 140587313 140597732 + MGP_129S1SvImJ_P0074995 Zp3 protein_coding protein_coding MGP_129S1SvImJ_T0074996.1 MGP_129S1SvImJ_G0030195.1 mouse_genomes_project 5 140587382 140596346 + MGP_129S1SvImJ_P0074996 Zp3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0015233.1 MGP_129S1SvImJ_G0013322.1 mouse_genomes_project 5 152975910 152976376 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072375.1 MGP_129S1SvImJ_G0029669.1 mouse_genomes_project 5 87254474 87309476 - MGP_129S1SvImJ_P0072375 Tmprss11a protein_coding protein_coding MGP_129S1SvImJ_T0072376.1 MGP_129S1SvImJ_G0029669.1 mouse_genomes_project 5 87259326 87262387 - Tmprss11a protein_coding retained_intron MGP_129S1SvImJ_T0004752.1 MGP_129S1SvImJ_G0004115.1 mouse_genomes_project 5 97689848 97691203 - Gm33050 antisense antisense MGP_129S1SvImJ_T0008400.1 MGP_129S1SvImJ_G0006819.1 mouse_genomes_project 5 131128123 131128529 - Gm43476 lincRNA lincRNA MGP_129S1SvImJ_T0018205.1 MGP_129S1SvImJ_G0015609.1 mouse_genomes_project 5 109773016 109774959 + A430072P03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018206.1 MGP_129S1SvImJ_G0015609.1 mouse_genomes_project 5 109774255 109776626 + A430072P03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0014947.1 MGP_129S1SvImJ_G0013036.1 mouse_genomes_project 5 28216271 28216638 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072051.1 MGP_129S1SvImJ_G0029613.1 mouse_genomes_project 5 72500905 72503344 - Zar1 protein_coding retained_intron MGP_129S1SvImJ_T0072052.1 MGP_129S1SvImJ_G0029613.1 mouse_genomes_project 5 72501213 72518341 - MGP_129S1SvImJ_P0072052 Zar1 protein_coding protein_coding MGP_129S1SvImJ_T0072053.1 MGP_129S1SvImJ_G0029613.1 mouse_genomes_project 5 72501216 72517852 - MGP_129S1SvImJ_P0072053 Zar1 protein_coding protein_coding MGP_129S1SvImJ_T0008195.1 MGP_129S1SvImJ_G0006682.1 mouse_genomes_project 5 77731709 77773832 + Gm34728 lincRNA lincRNA MGP_129S1SvImJ_T0008475.1 MGP_129S1SvImJ_G0006877.1 mouse_genomes_project 5 155179048 155206907 + BC028471 lincRNA lincRNA MGP_129S1SvImJ_T0008476.1 MGP_129S1SvImJ_G0006877.1 mouse_genomes_project 5 155180458 155189909 + BC028471 lincRNA lincRNA MGP_129S1SvImJ_T0008477.1 MGP_129S1SvImJ_G0006877.1 mouse_genomes_project 5 155180460 155199761 + BC028471 lincRNA lincRNA MGP_129S1SvImJ_T0008478.1 MGP_129S1SvImJ_G0006877.1 mouse_genomes_project 5 155180675 155205797 + BC028471 lincRNA lincRNA MGP_129S1SvImJ_T0008479.1 MGP_129S1SvImJ_G0006877.1 mouse_genomes_project 5 155189874 155206907 + BC028471 lincRNA lincRNA MGP_129S1SvImJ_T0008480.1 MGP_129S1SvImJ_G0006877.1 mouse_genomes_project 5 155189886 155190708 + BC028471 lincRNA lincRNA MGP_129S1SvImJ_T0015022.1 MGP_129S1SvImJ_G0013111.1 mouse_genomes_project 5 63254512 63254972 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010744.1 MGP_129S1SvImJ_G0008860.1 mouse_genomes_project 5 141696543 141696652 + Mir702 miRNA miRNA MGP_129S1SvImJ_T0001821.1 MGP_129S1SvImJ_G0001736.1 mouse_genomes_project 5 124638966 124642234 - TEC TEC MGP_129S1SvImJ_T0070568.1 MGP_129S1SvImJ_G0029368.1 mouse_genomes_project 5 25973759 25977800 + protein_coding retained_intron MGP_129S1SvImJ_T0072735.1 MGP_129S1SvImJ_G0029766.1 mouse_genomes_project 5 98039408 98064568 + MGP_129S1SvImJ_P0072735 Anxa3 protein_coding protein_coding MGP_129S1SvImJ_T0072736.1 MGP_129S1SvImJ_G0029766.1 mouse_genomes_project 5 98039454 98097144 + MGP_129S1SvImJ_P0072736 Anxa3 protein_coding protein_coding MGP_129S1SvImJ_T0072737.1 MGP_129S1SvImJ_G0029766.1 mouse_genomes_project 5 98039510 98072859 + MGP_129S1SvImJ_P0072737 Anxa3 protein_coding protein_coding MGP_129S1SvImJ_T0072738.1 MGP_129S1SvImJ_G0029766.1 mouse_genomes_project 5 98039569 98073800 + MGP_129S1SvImJ_P0072738 Anxa3 protein_coding protein_coding MGP_129S1SvImJ_T0072739.1 MGP_129S1SvImJ_G0029766.1 mouse_genomes_project 5 98059371 98082699 + Anxa3 protein_coding retained_intron MGP_129S1SvImJ_T0072740.1 MGP_129S1SvImJ_G0029766.1 mouse_genomes_project 5 98064459 98089515 + Anxa3 protein_coding retained_intron MGP_129S1SvImJ_T0072741.1 MGP_129S1SvImJ_G0029766.1 mouse_genomes_project 5 98075820 98078339 + Anxa3 protein_coding retained_intron MGP_129S1SvImJ_T0072742.1 MGP_129S1SvImJ_G0029766.1 mouse_genomes_project 5 98077933 98096860 + Anxa3 protein_coding retained_intron MGP_129S1SvImJ_T0072743.1 MGP_129S1SvImJ_G0029766.1 mouse_genomes_project 5 98093173 98097038 + MGP_129S1SvImJ_P0072743 Anxa3 protein_coding protein_coding MGP_129S1SvImJ_T0015196.1 MGP_129S1SvImJ_G0013285.1 mouse_genomes_project 5 142678306 142679058 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0074394.1 MGP_129S1SvImJ_G0030090.1 mouse_genomes_project 5 127906894 128013343 - MGP_129S1SvImJ_P0074394 Pitpnm2 protein_coding protein_coding MGP_129S1SvImJ_T0074395.1 MGP_129S1SvImJ_G0030090.1 mouse_genomes_project 5 127906894 128046518 - MGP_129S1SvImJ_P0074395 Pitpnm2 protein_coding protein_coding MGP_129S1SvImJ_T0074396.1 MGP_129S1SvImJ_G0030090.1 mouse_genomes_project 5 127906895 128046388 - MGP_129S1SvImJ_P0074396 Pitpnm2 protein_coding protein_coding MGP_129S1SvImJ_T0074397.1 MGP_129S1SvImJ_G0030090.1 mouse_genomes_project 5 127907951 127975981 - MGP_129S1SvImJ_P0074397 Pitpnm2 protein_coding protein_coding MGP_129S1SvImJ_T0074398.1 MGP_129S1SvImJ_G0030090.1 mouse_genomes_project 5 127908498 127912746 - Pitpnm2 protein_coding retained_intron MGP_129S1SvImJ_T0074399.1 MGP_129S1SvImJ_G0030090.1 mouse_genomes_project 5 127909279 127910305 - Pitpnm2 protein_coding retained_intron MGP_129S1SvImJ_T0074400.1 MGP_129S1SvImJ_G0030090.1 mouse_genomes_project 5 127913408 127914825 - Pitpnm2 protein_coding retained_intron MGP_129S1SvImJ_T0074401.1 MGP_129S1SvImJ_G0030090.1 mouse_genomes_project 5 127920990 127978546 - MGP_129S1SvImJ_P0074401 Pitpnm2 protein_coding protein_coding MGP_129S1SvImJ_T0074402.1 MGP_129S1SvImJ_G0030090.1 mouse_genomes_project 5 127921163 127928446 - Pitpnm2 protein_coding retained_intron MGP_129S1SvImJ_T0074403.1 MGP_129S1SvImJ_G0030090.1 mouse_genomes_project 5 127931788 127973917 - MGP_129S1SvImJ_P0074403 Pitpnm2 protein_coding protein_coding MGP_129S1SvImJ_T0075594.1 MGP_129S1SvImJ_G0030313.1 mouse_genomes_project 5 147765416 147769655 - MGP_129S1SvImJ_P0075594 Papolb protein_coding protein_coding MGP_129S1SvImJ_T0073684.1 MGP_129S1SvImJ_G0029969.1 mouse_genomes_project 5 118309002 118331723 + Msi1 protein_coding retained_intron MGP_129S1SvImJ_T0073685.1 MGP_129S1SvImJ_G0029969.1 mouse_genomes_project 5 118309051 118338306 + MGP_129S1SvImJ_P0073685 Msi1 protein_coding protein_coding MGP_129S1SvImJ_T0073686.1 MGP_129S1SvImJ_G0029969.1 mouse_genomes_project 5 118311471 118333643 + MGP_129S1SvImJ_P0073686 Msi1 protein_coding protein_coding MGP_129S1SvImJ_T0073687.1 MGP_129S1SvImJ_G0029969.1 mouse_genomes_project 5 118314274 118316544 + Msi1 protein_coding retained_intron MGP_129S1SvImJ_T0073688.1 MGP_129S1SvImJ_G0029969.1 mouse_genomes_project 5 118314643 118333636 + Msi1 protein_coding retained_intron MGP_129S1SvImJ_T0073689.1 MGP_129S1SvImJ_G0029969.1 mouse_genomes_project 5 118315192 118326412 + Msi1 protein_coding retained_intron MGP_129S1SvImJ_T0073690.1 MGP_129S1SvImJ_G0029969.1 mouse_genomes_project 5 118315888 118333620 + MGP_129S1SvImJ_P0073690 Msi1 protein_coding protein_coding MGP_129S1SvImJ_T0073691.1 MGP_129S1SvImJ_G0029969.1 mouse_genomes_project 5 118316390 118326631 + Msi1 protein_coding retained_intron MGP_129S1SvImJ_T0015153.1 MGP_129S1SvImJ_G0013242.1 mouse_genomes_project 5 116819863 116820928 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004913.1 MGP_129S1SvImJ_G0004223.1 mouse_genomes_project 5 155243356 155245093 - Gm43151 antisense antisense MGP_129S1SvImJ_T0008111.1 MGP_129S1SvImJ_G0006615.1 mouse_genomes_project 5 36193339 36194112 + Gm43763 lincRNA lincRNA MGP_129S1SvImJ_T0099903.1 MGP_129S1SvImJ_G0037970.1 mouse_genomes_project 5 20098852 20098959 - Gm22887 snRNA snRNA MGP_129S1SvImJ_T0071657.1 MGP_129S1SvImJ_G0029547.1 mouse_genomes_project 5 51626563 51657623 - MGP_129S1SvImJ_P0071657 Sepsecs protein_coding protein_coding MGP_129S1SvImJ_T0071658.1 MGP_129S1SvImJ_G0029547.1 mouse_genomes_project 5 51626563 51657623 - MGP_129S1SvImJ_P0071658 Sepsecs protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071659.1 MGP_129S1SvImJ_G0029547.1 mouse_genomes_project 5 51627652 51653871 - MGP_129S1SvImJ_P0071659 Sepsecs protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071660.1 MGP_129S1SvImJ_G0029547.1 mouse_genomes_project 5 51633116 51634957 - Sepsecs protein_coding retained_intron MGP_129S1SvImJ_T0071661.1 MGP_129S1SvImJ_G0029547.1 mouse_genomes_project 5 51644213 51657530 - MGP_129S1SvImJ_P0071661 Sepsecs protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0004839.1 MGP_129S1SvImJ_G0004172.1 mouse_genomes_project 5 125645343 125653783 + Gm15637 antisense antisense MGP_129S1SvImJ_T0008406.1 MGP_129S1SvImJ_G0006824.1 mouse_genomes_project 5 132605101 132612319 - 5930412G12Rik lincRNA lincRNA MGP_129S1SvImJ_T0008407.1 MGP_129S1SvImJ_G0006824.1 mouse_genomes_project 5 132605101 132628686 - 5930412G12Rik lincRNA lincRNA MGP_129S1SvImJ_T0008408.1 MGP_129S1SvImJ_G0006824.1 mouse_genomes_project 5 132605123 132628686 - 5930412G12Rik lincRNA lincRNA MGP_129S1SvImJ_T0008409.1 MGP_129S1SvImJ_G0006824.1 mouse_genomes_project 5 132605173 132612319 - 5930412G12Rik lincRNA lincRNA MGP_129S1SvImJ_T0008410.1 MGP_129S1SvImJ_G0006824.1 mouse_genomes_project 5 132609082 132628692 - 5930412G12Rik lincRNA lincRNA MGP_129S1SvImJ_T0008411.1 MGP_129S1SvImJ_G0006824.1 mouse_genomes_project 5 132610193 132628653 - 5930412G12Rik lincRNA lincRNA MGP_129S1SvImJ_T0018202.1 MGP_129S1SvImJ_G0015607.1 mouse_genomes_project 5 91627953 91666749 - Gm43448 processed_transcript processed_transcript MGP_129S1SvImJ_T0018203.1 MGP_129S1SvImJ_G0015607.1 mouse_genomes_project 5 91645828 91666769 - Gm43448 processed_transcript processed_transcript MGP_129S1SvImJ_T0099969.1 MGP_129S1SvImJ_G0038036.1 mouse_genomes_project 5 130420761 130420868 - Gm24839 snRNA snRNA MGP_129S1SvImJ_T0015184.1 MGP_129S1SvImJ_G0013273.1 mouse_genomes_project 5 139483612 139483784 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004796.1 MGP_129S1SvImJ_G0004143.1 mouse_genomes_project 5 115408422 115416831 + 1700095B10Rik antisense antisense MGP_129S1SvImJ_T0004797.1 MGP_129S1SvImJ_G0004143.1 mouse_genomes_project 5 115408430 115410822 + 1700095B10Rik antisense antisense MGP_129S1SvImJ_T0004798.1 MGP_129S1SvImJ_G0004143.1 mouse_genomes_project 5 115408439 115416779 + 1700095B10Rik antisense antisense MGP_129S1SvImJ_T0004799.1 MGP_129S1SvImJ_G0004143.1 mouse_genomes_project 5 115408462 115411073 + 1700095B10Rik antisense antisense MGP_129S1SvImJ_T0072140.1 MGP_129S1SvImJ_G0029630.1 mouse_genomes_project 5 74033376 74116598 - MGP_129S1SvImJ_P0072140 Usp46 protein_coding protein_coding MGP_129S1SvImJ_T0072141.1 MGP_129S1SvImJ_G0029630.1 mouse_genomes_project 5 74033647 74116609 - MGP_129S1SvImJ_P0072141 Usp46 protein_coding protein_coding MGP_129S1SvImJ_T0072142.1 MGP_129S1SvImJ_G0029630.1 mouse_genomes_project 5 74036725 74074633 - Usp46 protein_coding processed_transcript MGP_129S1SvImJ_T0072143.1 MGP_129S1SvImJ_G0029630.1 mouse_genomes_project 5 74062140 74071625 - MGP_129S1SvImJ_P0072143 Usp46 protein_coding protein_coding MGP_129S1SvImJ_T0072144.1 MGP_129S1SvImJ_G0029630.1 mouse_genomes_project 5 74066246 74071556 - Usp46 protein_coding retained_intron MGP_129S1SvImJ_T0072145.1 MGP_129S1SvImJ_G0029630.1 mouse_genomes_project 5 74066292 74113919 - MGP_129S1SvImJ_P0072145 Usp46 protein_coding protein_coding MGP_129S1SvImJ_T0075746.1 MGP_129S1SvImJ_G0030345.1 mouse_genomes_project 5 149420629 149512021 + MGP_129S1SvImJ_P0075746 Lmtk2 protein_coding protein_coding MGP_129S1SvImJ_T0008126.1 MGP_129S1SvImJ_G0006624.1 mouse_genomes_project 5 41647863 41659552 - Gm43700 lincRNA lincRNA MGP_129S1SvImJ_T0075857.1 MGP_129S1SvImJ_G0030367.1 mouse_genomes_project 5 150876515 151028204 - MGP_129S1SvImJ_P0075857 Cyp3a16 protein_coding protein_coding MGP_129S1SvImJ_T0072360.1 MGP_129S1SvImJ_G0029664.1 mouse_genomes_project 5 86897907 86935331 + MGP_129S1SvImJ_P0072360 Stap1 protein_coding protein_coding MGP_129S1SvImJ_T0072361.1 MGP_129S1SvImJ_G0029664.1 mouse_genomes_project 5 86897911 86927078 + Stap1 protein_coding retained_intron MGP_129S1SvImJ_T0072362.1 MGP_129S1SvImJ_G0029664.1 mouse_genomes_project 5 86897935 86914648 + Stap1 protein_coding retained_intron MGP_129S1SvImJ_T0072363.1 MGP_129S1SvImJ_G0029664.1 mouse_genomes_project 5 86897944 86914644 + Stap1 protein_coding retained_intron MGP_129S1SvImJ_T0072364.1 MGP_129S1SvImJ_G0029664.1 mouse_genomes_project 5 86897973 86933227 + MGP_129S1SvImJ_P0072364 Stap1 protein_coding protein_coding MGP_129S1SvImJ_T0072365.1 MGP_129S1SvImJ_G0029664.1 mouse_genomes_project 5 86915161 86924140 + Stap1 protein_coding retained_intron MGP_129S1SvImJ_T0099952.1 MGP_129S1SvImJ_G0038019.1 mouse_genomes_project 5 108010629 108010736 - Gm25672 snRNA snRNA MGP_129S1SvImJ_T0015057.1 MGP_129S1SvImJ_G0013146.1 mouse_genomes_project 5 76943242 76943683 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014911.1 MGP_129S1SvImJ_G0013000.1 mouse_genomes_project 5 20131635 20131931 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015009.1 MGP_129S1SvImJ_G0013098.1 mouse_genomes_project 5 58395841 58396795 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001810.1 MGP_129S1SvImJ_G0001725.1 mouse_genomes_project 5 121800023 121802441 + TEC TEC MGP_129S1SvImJ_T0015173.1 MGP_129S1SvImJ_G0013262.1 mouse_genomes_project 5 126438928 126455325 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015029.1 MGP_129S1SvImJ_G0013118.1 mouse_genomes_project 5 63766398 63767217 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073894.1 MGP_129S1SvImJ_G0030006.1 mouse_genomes_project 5 123891441 123971349 - MGP_129S1SvImJ_P0073894 Tpcn1 protein_coding protein_coding MGP_129S1SvImJ_T0073895.1 MGP_129S1SvImJ_G0030006.1 mouse_genomes_project 5 123963940 123971270 - Tpcn1 protein_coding retained_intron MGP_129S1SvImJ_T0073896.1 MGP_129S1SvImJ_G0030006.1 mouse_genomes_project 5 123969832 123971275 - Tpcn1 protein_coding retained_intron MGP_129S1SvImJ_T0070643.1 MGP_129S1SvImJ_G0029385.1 mouse_genomes_project 5 28138811 28167954 + MGP_129S1SvImJ_P0070643 Hadhb protein_coding protein_coding MGP_129S1SvImJ_T0070644.1 MGP_129S1SvImJ_G0029385.1 mouse_genomes_project 5 28138821 28158314 + MGP_129S1SvImJ_P0070644 Hadhb protein_coding protein_coding MGP_129S1SvImJ_T0070645.1 MGP_129S1SvImJ_G0029385.1 mouse_genomes_project 5 28138835 28167950 + MGP_129S1SvImJ_P0070645 Hadhb protein_coding protein_coding MGP_129S1SvImJ_T0070646.1 MGP_129S1SvImJ_G0029385.1 mouse_genomes_project 5 28138835 28167943 + MGP_129S1SvImJ_P0070646 Hadhb protein_coding protein_coding MGP_129S1SvImJ_T0070647.1 MGP_129S1SvImJ_G0029385.1 mouse_genomes_project 5 28138838 28151639 + Hadhb protein_coding retained_intron MGP_129S1SvImJ_T0070648.1 MGP_129S1SvImJ_G0029385.1 mouse_genomes_project 5 28138866 28160252 + MGP_129S1SvImJ_P0070648 Hadhb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070649.1 MGP_129S1SvImJ_G0029385.1 mouse_genomes_project 5 28158318 28162452 + Hadhb protein_coding retained_intron MGP_129S1SvImJ_T0070650.1 MGP_129S1SvImJ_G0029385.1 mouse_genomes_project 5 28161918 28164335 + Hadhb protein_coding retained_intron MGP_129S1SvImJ_T0070651.1 MGP_129S1SvImJ_G0029385.1 mouse_genomes_project 5 28163591 28167597 + Hadhb protein_coding retained_intron MGP_129S1SvImJ_T0015005.1 MGP_129S1SvImJ_G0013094.1 mouse_genomes_project 5 56639471 56640915 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001478.1 MGP_129S1SvImJ_G0001399.1 mouse_genomes_project 5 11877184 11880606 + TEC TEC MGP_129S1SvImJ_T0008452.1 MGP_129S1SvImJ_G0006858.1 mouse_genomes_project 5 152923971 152924515 + Gm27033 lincRNA lincRNA MGP_129S1SvImJ_T0101191.1 MGP_129S1SvImJ_G0039258.1 mouse_genomes_project 5 62046771 62046903 - Gm24079 snoRNA snoRNA MGP_129S1SvImJ_T0101729.1 MGP_129S1SvImJ_G0039730.1 mouse_genomes_project 5 86892910 86893910 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101730.1 MGP_129S1SvImJ_G0039730.1 mouse_genomes_project 5 86892965 86894049 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0073911.1 MGP_129S1SvImJ_G0030011.1 mouse_genomes_project 5 124047024 124053115 + MGP_129S1SvImJ_P0073911 Rasal1 protein_coding protein_coding MGP_129S1SvImJ_T0073912.1 MGP_129S1SvImJ_G0030011.1 mouse_genomes_project 5 124047034 124080295 + MGP_129S1SvImJ_P0073912 Rasal1 protein_coding protein_coding MGP_129S1SvImJ_T0073913.1 MGP_129S1SvImJ_G0030011.1 mouse_genomes_project 5 124047400 124080295 + MGP_129S1SvImJ_P0073913 Rasal1 protein_coding protein_coding MGP_129S1SvImJ_T0073914.1 MGP_129S1SvImJ_G0030011.1 mouse_genomes_project 5 124051581 124057867 + Rasal1 protein_coding processed_transcript MGP_129S1SvImJ_T0073915.1 MGP_129S1SvImJ_G0030011.1 mouse_genomes_project 5 124079290 124080004 + Rasal1 protein_coding retained_intron MGP_129S1SvImJ_T0072239.1 MGP_129S1SvImJ_G0029647.1 mouse_genomes_project 5 76854513 76856357 + MGP_129S1SvImJ_P0072239 C530008M17Rik protein_coding protein_coding MGP_129S1SvImJ_T0072240.1 MGP_129S1SvImJ_G0029647.1 mouse_genomes_project 5 76855684 77045921 + MGP_129S1SvImJ_P0072240 C530008M17Rik protein_coding protein_coding MGP_129S1SvImJ_T0072241.1 MGP_129S1SvImJ_G0029647.1 mouse_genomes_project 5 76855686 76857110 + C530008M17Rik protein_coding processed_transcript MGP_129S1SvImJ_T0072242.1 MGP_129S1SvImJ_G0029647.1 mouse_genomes_project 5 76855722 76992812 + C530008M17Rik protein_coding processed_transcript MGP_129S1SvImJ_T0072243.1 MGP_129S1SvImJ_G0029647.1 mouse_genomes_project 5 76953547 77084252 + MGP_129S1SvImJ_P0072243 C530008M17Rik protein_coding protein_coding MGP_129S1SvImJ_T0072244.1 MGP_129S1SvImJ_G0029647.1 mouse_genomes_project 5 77015089 77047629 + MGP_129S1SvImJ_P0072244 C530008M17Rik protein_coding protein_coding MGP_129S1SvImJ_T0072245.1 MGP_129S1SvImJ_G0029647.1 mouse_genomes_project 5 77045638 77084467 + MGP_129S1SvImJ_P0072245 C530008M17Rik protein_coding protein_coding MGP_129S1SvImJ_T0072246.1 MGP_129S1SvImJ_G0029647.1 mouse_genomes_project 5 77045638 77084476 + MGP_129S1SvImJ_P0072246 C530008M17Rik protein_coding protein_coding MGP_129S1SvImJ_T0072247.1 MGP_129S1SvImJ_G0029647.1 mouse_genomes_project 5 77045658 77047631 + MGP_129S1SvImJ_P0072247 C530008M17Rik protein_coding protein_coding MGP_129S1SvImJ_T0072248.1 MGP_129S1SvImJ_G0029647.1 mouse_genomes_project 5 77068439 77077413 + C530008M17Rik protein_coding retained_intron MGP_129S1SvImJ_T0072249.1 MGP_129S1SvImJ_G0029647.1 mouse_genomes_project 5 77077022 77079339 + MGP_129S1SvImJ_P0072249 C530008M17Rik protein_coding protein_coding MGP_129S1SvImJ_T0072250.1 MGP_129S1SvImJ_G0029647.1 mouse_genomes_project 5 77080109 77081596 + C530008M17Rik protein_coding processed_transcript MGP_129S1SvImJ_T0075466.1 MGP_129S1SvImJ_G0030283.1 mouse_genomes_project 5 144352290 144354647 + Gpr146 protein_coding processed_transcript MGP_129S1SvImJ_T0075467.1 MGP_129S1SvImJ_G0030283.1 mouse_genomes_project 5 144352335 144354648 + Gpr146 protein_coding processed_transcript MGP_129S1SvImJ_T0075468.1 MGP_129S1SvImJ_G0030283.1 mouse_genomes_project 5 144352756 144370714 + MGP_129S1SvImJ_P0075468 Gpr146 protein_coding protein_coding MGP_129S1SvImJ_T0075469.1 MGP_129S1SvImJ_G0030283.1 mouse_genomes_project 5 144352813 144353853 + MGP_129S1SvImJ_P0075469 Gpr146 protein_coding protein_coding MGP_129S1SvImJ_T0075470.1 MGP_129S1SvImJ_G0030283.1 mouse_genomes_project 5 144355174 144374366 + MGP_129S1SvImJ_P0075470 Gpr146 protein_coding protein_coding MGP_129S1SvImJ_T0075471.1 MGP_129S1SvImJ_G0030283.1 mouse_genomes_project 5 144366176 144374365 + MGP_129S1SvImJ_P0075471 Gpr146 protein_coding protein_coding MGP_129S1SvImJ_T0075606.1 MGP_129S1SvImJ_G0030317.1 mouse_genomes_project 5 147998448 148073458 - MGP_129S1SvImJ_P0075606 protein_coding protein_coding MGP_129S1SvImJ_T0075607.1 MGP_129S1SvImJ_G0030317.1 mouse_genomes_project 5 148008213 148012728 - protein_coding processed_transcript MGP_129S1SvImJ_T0075608.1 MGP_129S1SvImJ_G0030317.1 mouse_genomes_project 5 148009068 148013271 - protein_coding retained_intron MGP_129S1SvImJ_T0075609.1 MGP_129S1SvImJ_G0030317.1 mouse_genomes_project 5 148037093 148105612 - MGP_129S1SvImJ_P0075609 protein_coding protein_coding MGP_129S1SvImJ_T0075610.1 MGP_129S1SvImJ_G0030317.1 mouse_genomes_project 5 148046617 148048325 - protein_coding retained_intron MGP_129S1SvImJ_T0075611.1 MGP_129S1SvImJ_G0030317.1 mouse_genomes_project 5 148073246 148085421 - protein_coding processed_transcript MGP_129S1SvImJ_T0075612.1 MGP_129S1SvImJ_G0030317.1 mouse_genomes_project 5 148077990 148105330 - MGP_129S1SvImJ_P0075612 protein_coding protein_coding MGP_129S1SvImJ_T0015105.1 MGP_129S1SvImJ_G0013194.1 mouse_genomes_project 5 102867367 102867659 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011609.1 MGP_129S1SvImJ_G0009725.1 mouse_genomes_project 5 22582524 22582769 - Gm25363 misc_RNA misc_RNA MGP_129S1SvImJ_T0071800.1 MGP_129S1SvImJ_G0029574.1 mouse_genomes_project 5 64890127 64965271 - MGP_129S1SvImJ_P0071800 Rfc1 protein_coding protein_coding MGP_129S1SvImJ_T0071801.1 MGP_129S1SvImJ_G0029574.1 mouse_genomes_project 5 64890129 64965328 - MGP_129S1SvImJ_P0071801 Rfc1 protein_coding protein_coding MGP_129S1SvImJ_T0071802.1 MGP_129S1SvImJ_G0029574.1 mouse_genomes_project 5 64890129 64965377 - MGP_129S1SvImJ_P0071802 Rfc1 protein_coding protein_coding MGP_129S1SvImJ_T0071803.1 MGP_129S1SvImJ_G0029574.1 mouse_genomes_project 5 64890879 64965325 - MGP_129S1SvImJ_P0071803 Rfc1 protein_coding protein_coding MGP_129S1SvImJ_T0071804.1 MGP_129S1SvImJ_G0029574.1 mouse_genomes_project 5 64891353 64897285 - MGP_129S1SvImJ_P0071804 Rfc1 protein_coding protein_coding MGP_129S1SvImJ_T0071805.1 MGP_129S1SvImJ_G0029574.1 mouse_genomes_project 5 64892523 64901819 - Rfc1 protein_coding retained_intron MGP_129S1SvImJ_T0071806.1 MGP_129S1SvImJ_G0029574.1 mouse_genomes_project 5 64938548 64965320 - Rfc1 protein_coding retained_intron MGP_129S1SvImJ_T0102560.1 MGP_129S1SvImJ_G0040393.1 mouse_genomes_project 5 77991945 77993782 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0075038.1 MGP_129S1SvImJ_G0030202.1 mouse_genomes_project 5 140761289 140765656 + MGP_129S1SvImJ_P0075038 Alkbh4 protein_coding protein_coding MGP_129S1SvImJ_T0075039.1 MGP_129S1SvImJ_G0030202.1 mouse_genomes_project 5 140761297 140766756 + MGP_129S1SvImJ_P0075039 Alkbh4 protein_coding protein_coding MGP_129S1SvImJ_T0075040.1 MGP_129S1SvImJ_G0030202.1 mouse_genomes_project 5 140761301 140765922 + MGP_129S1SvImJ_P0075040 Alkbh4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075041.1 MGP_129S1SvImJ_G0030202.1 mouse_genomes_project 5 140761345 140765647 + MGP_129S1SvImJ_P0075041 Alkbh4 protein_coding protein_coding MGP_129S1SvImJ_T0075042.1 MGP_129S1SvImJ_G0030202.1 mouse_genomes_project 5 140763924 140766759 + MGP_129S1SvImJ_P0075042 Alkbh4 protein_coding protein_coding MGP_129S1SvImJ_T0015095.1 MGP_129S1SvImJ_G0013184.1 mouse_genomes_project 5 97392764 97393175 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004915.1 MGP_129S1SvImJ_G0004225.1 mouse_genomes_project 5 155315871 155374223 - Gm15997 antisense antisense MGP_129S1SvImJ_T0001870.1 MGP_129S1SvImJ_G0001784.1 mouse_genomes_project 5 135258556 135260191 - TEC TEC MGP_129S1SvImJ_T0102558.1 MGP_129S1SvImJ_G0040391.1 mouse_genomes_project 5 57696446 57697626 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0073335.1 MGP_129S1SvImJ_G0029896.1 mouse_genomes_project 5 113361609 113785182 + MGP_129S1SvImJ_P0073335 Ttc28 protein_coding protein_coding MGP_129S1SvImJ_T0073336.1 MGP_129S1SvImJ_G0029896.1 mouse_genomes_project 5 113361609 113785181 + MGP_129S1SvImJ_P0073336 Ttc28 protein_coding protein_coding MGP_129S1SvImJ_T0073337.1 MGP_129S1SvImJ_G0029896.1 mouse_genomes_project 5 113361628 113396132 + Ttc28 protein_coding processed_transcript MGP_129S1SvImJ_T0073338.1 MGP_129S1SvImJ_G0029896.1 mouse_genomes_project 5 113716662 113722977 + Ttc28 protein_coding retained_intron MGP_129S1SvImJ_T0073339.1 MGP_129S1SvImJ_G0029896.1 mouse_genomes_project 5 113727130 113732231 + Ttc28 protein_coding processed_transcript MGP_129S1SvImJ_T0073340.1 MGP_129S1SvImJ_G0029896.1 mouse_genomes_project 5 113729081 113760721 + Ttc28 protein_coding retained_intron MGP_129S1SvImJ_T0001480.1 MGP_129S1SvImJ_G0001401.1 mouse_genomes_project 5 11886250 11891799 + TEC TEC MGP_129S1SvImJ_T0008180.1 MGP_129S1SvImJ_G0006669.1 mouse_genomes_project 5 74851455 74856017 + Gm42575 lincRNA lincRNA MGP_129S1SvImJ_T0001837.1 MGP_129S1SvImJ_G0001752.1 mouse_genomes_project 5 126794383 126795948 + TEC TEC MGP_129S1SvImJ_T0001695.1 MGP_129S1SvImJ_G0001611.1 mouse_genomes_project 5 69063787 69066178 - TEC TEC MGP_129S1SvImJ_T0001776.1 MGP_129S1SvImJ_G0001691.1 mouse_genomes_project 5 113461646 113462198 + TEC TEC MGP_129S1SvImJ_T0070764.1 MGP_129S1SvImJ_G0029406.1 mouse_genomes_project 5 29016057 29020477 + MGP_129S1SvImJ_P0070764 Atraid protein_coding protein_coding MGP_129S1SvImJ_T0070765.1 MGP_129S1SvImJ_G0029406.1 mouse_genomes_project 5 29016066 29024052 + Atraid protein_coding retained_intron MGP_129S1SvImJ_T0070766.1 MGP_129S1SvImJ_G0029406.1 mouse_genomes_project 5 29016380 29024058 + MGP_129S1SvImJ_P0070766 Atraid protein_coding protein_coding MGP_129S1SvImJ_T0070767.1 MGP_129S1SvImJ_G0029406.1 mouse_genomes_project 5 29016384 29024056 + MGP_129S1SvImJ_P0070767 Atraid protein_coding protein_coding MGP_129S1SvImJ_T0070768.1 MGP_129S1SvImJ_G0029406.1 mouse_genomes_project 5 29016393 29023428 + MGP_129S1SvImJ_P0070768 Atraid protein_coding protein_coding MGP_129S1SvImJ_T0070769.1 MGP_129S1SvImJ_G0029406.1 mouse_genomes_project 5 29016404 29024053 + MGP_129S1SvImJ_P0070769 Atraid protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070770.1 MGP_129S1SvImJ_G0029406.1 mouse_genomes_project 5 29016467 29023779 + MGP_129S1SvImJ_P0070770 Atraid protein_coding protein_coding MGP_129S1SvImJ_T0070771.1 MGP_129S1SvImJ_G0029406.1 mouse_genomes_project 5 29023306 29024058 + Atraid protein_coding processed_transcript MGP_129S1SvImJ_T0001902.1 MGP_129S1SvImJ_G0001815.1 mouse_genomes_project 5 139484128 139487144 - TEC TEC MGP_129S1SvImJ_T0018204.1 MGP_129S1SvImJ_G0015608.1 mouse_genomes_project 5 108524142 108665143 - Gm28039 processed_transcript processed_transcript MGP_129S1SvImJ_T0075233.1 MGP_129S1SvImJ_G0030237.1 mouse_genomes_project 5 142406336 142420032 + MGP_129S1SvImJ_P0075233 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072590.1 MGP_129S1SvImJ_G0029739.1 mouse_genomes_project 5 93080743 93095692 - Rchy1 protein_coding processed_transcript MGP_129S1SvImJ_T0072591.1 MGP_129S1SvImJ_G0029739.1 mouse_genomes_project 5 93080743 93096204 - MGP_129S1SvImJ_P0072591 Rchy1 protein_coding protein_coding MGP_129S1SvImJ_T0072592.1 MGP_129S1SvImJ_G0029739.1 mouse_genomes_project 5 93080840 93095871 - MGP_129S1SvImJ_P0072592 Rchy1 protein_coding protein_coding MGP_129S1SvImJ_T0072593.1 MGP_129S1SvImJ_G0029739.1 mouse_genomes_project 5 93084028 93085929 - Rchy1 protein_coding retained_intron MGP_129S1SvImJ_T0072594.1 MGP_129S1SvImJ_G0029739.1 mouse_genomes_project 5 93094818 93095862 - Rchy1 protein_coding retained_intron MGP_129S1SvImJ_T0001491.1 MGP_129S1SvImJ_G0001412.1 mouse_genomes_project 5 19545786 19547673 - TEC TEC MGP_129S1SvImJ_T0071263.1 MGP_129S1SvImJ_G0029479.1 mouse_genomes_project 5 33785941 33812331 - MGP_129S1SvImJ_P0071263 Cpz protein_coding protein_coding MGP_129S1SvImJ_T0071264.1 MGP_129S1SvImJ_G0029479.1 mouse_genomes_project 5 33804305 33812204 - MGP_129S1SvImJ_P0071264 Cpz protein_coding protein_coding MGP_129S1SvImJ_T0004782.1 MGP_129S1SvImJ_G0004130.1 mouse_genomes_project 5 109423070 109434353 - Gm42902 antisense antisense MGP_129S1SvImJ_T0001727.1 MGP_129S1SvImJ_G0001642.1 mouse_genomes_project 5 82427368 82428376 + TEC TEC MGP_129S1SvImJ_T0004688.1 MGP_129S1SvImJ_G0004064.1 mouse_genomes_project 5 35072405 35074225 + Gm43701 antisense antisense MGP_129S1SvImJ_T0099916.1 MGP_129S1SvImJ_G0037983.1 mouse_genomes_project 5 37133580 37133687 - Gm22779 snRNA snRNA MGP_129S1SvImJ_T0072499.1 MGP_129S1SvImJ_G0029712.1 mouse_genomes_project 5 89727690 89757161 + Mob1b protein_coding retained_intron MGP_129S1SvImJ_T0072500.1 MGP_129S1SvImJ_G0029712.1 mouse_genomes_project 5 89727690 89774174 + MGP_129S1SvImJ_P0072500 Mob1b protein_coding protein_coding MGP_129S1SvImJ_T0072501.1 MGP_129S1SvImJ_G0029712.1 mouse_genomes_project 5 89727706 89768057 + MGP_129S1SvImJ_P0072501 Mob1b protein_coding protein_coding MGP_129S1SvImJ_T0072502.1 MGP_129S1SvImJ_G0029712.1 mouse_genomes_project 5 89727812 89757876 + Mob1b protein_coding retained_intron MGP_129S1SvImJ_T0075800.1 MGP_129S1SvImJ_G0030356.1 mouse_genomes_project 5 150535997 150552901 + MGP_129S1SvImJ_P0075800 Arpc1b protein_coding protein_coding MGP_129S1SvImJ_T0075801.1 MGP_129S1SvImJ_G0030356.1 mouse_genomes_project 5 150536040 150546293 + Arpc1b protein_coding processed_transcript MGP_129S1SvImJ_T0075802.1 MGP_129S1SvImJ_G0030356.1 mouse_genomes_project 5 150536083 150547753 + Arpc1b protein_coding retained_intron MGP_129S1SvImJ_T0075803.1 MGP_129S1SvImJ_G0030356.1 mouse_genomes_project 5 150536094 150551430 + MGP_129S1SvImJ_P0075803 Arpc1b protein_coding protein_coding MGP_129S1SvImJ_T0075804.1 MGP_129S1SvImJ_G0030356.1 mouse_genomes_project 5 150536098 150546137 + MGP_129S1SvImJ_P0075804 Arpc1b protein_coding protein_coding MGP_129S1SvImJ_T0075805.1 MGP_129S1SvImJ_G0030356.1 mouse_genomes_project 5 150547176 150550284 + MGP_129S1SvImJ_P0075805 Arpc1b protein_coding protein_coding MGP_129S1SvImJ_T0075806.1 MGP_129S1SvImJ_G0030356.1 mouse_genomes_project 5 150547471 150549204 + Arpc1b protein_coding retained_intron MGP_129S1SvImJ_T0075807.1 MGP_129S1SvImJ_G0030356.1 mouse_genomes_project 5 150547471 150550430 + Arpc1b protein_coding processed_transcript MGP_129S1SvImJ_T0075808.1 MGP_129S1SvImJ_G0030356.1 mouse_genomes_project 5 150549388 150550826 + Arpc1b protein_coding retained_intron MGP_129S1SvImJ_T0075809.1 MGP_129S1SvImJ_G0030356.1 mouse_genomes_project 5 150550255 150553907 + MGP_129S1SvImJ_P0075809 Arpc1b protein_coding protein_coding MGP_129S1SvImJ_T0075810.1 MGP_129S1SvImJ_G0030356.1 mouse_genomes_project 5 150550718 150551430 + Arpc1b protein_coding retained_intron MGP_129S1SvImJ_T0014939.1 MGP_129S1SvImJ_G0013028.1 mouse_genomes_project 5 25897373 25899666 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101177.1 MGP_129S1SvImJ_G0039244.1 mouse_genomes_project 5 18649347 18649466 - Gm22490 snoRNA snoRNA MGP_129S1SvImJ_T0008463.1 MGP_129S1SvImJ_G0006868.1 mouse_genomes_project 5 154747542 154752897 + lincRNA lincRNA MGP_129S1SvImJ_T0073897.1 MGP_129S1SvImJ_G0030007.1 mouse_genomes_project 5 123971691 123992080 + MGP_129S1SvImJ_P0073897 Iqcd protein_coding protein_coding MGP_129S1SvImJ_T0073898.1 MGP_129S1SvImJ_G0030007.1 mouse_genomes_project 5 123971698 123992084 + MGP_129S1SvImJ_P0073898 Iqcd protein_coding protein_coding MGP_129S1SvImJ_T0011635.1 MGP_129S1SvImJ_G0009751.1 mouse_genomes_project 5 144865668 144865989 + Gm24146 misc_RNA misc_RNA MGP_129S1SvImJ_T0010742.1 MGP_129S1SvImJ_G0008858.1 mouse_genomes_project 5 140729039 140729121 + Mir7035 miRNA miRNA MGP_129S1SvImJ_T0001829.1 MGP_129S1SvImJ_G0001744.1 mouse_genomes_project 5 126013402 126013716 + TEC TEC MGP_129S1SvImJ_T0001908.1 MGP_129S1SvImJ_G0001821.1 mouse_genomes_project 5 142073423 142074368 + TEC TEC MGP_129S1SvImJ_T0073598.1 MGP_129S1SvImJ_G0029948.1 mouse_genomes_project 5 117601821 117603338 - MGP_129S1SvImJ_P0073598 2610524H06Rik protein_coding protein_coding MGP_129S1SvImJ_T0001737.1 MGP_129S1SvImJ_G0001652.1 mouse_genomes_project 5 94312115 94312708 - TEC TEC MGP_129S1SvImJ_T0099971.1 MGP_129S1SvImJ_G0038038.1 mouse_genomes_project 5 140470546 140470653 + Gm22450 snRNA snRNA MGP_129S1SvImJ_T0001643.1 MGP_129S1SvImJ_G0001560.1 mouse_genomes_project 5 63205781 63210506 - TEC TEC MGP_129S1SvImJ_T0001644.1 MGP_129S1SvImJ_G0001560.1 mouse_genomes_project 5 63209561 63209876 - TEC TEC MGP_129S1SvImJ_T0008216.1 MGP_129S1SvImJ_G0006700.1 mouse_genomes_project 5 98099832 98104720 + 1700016F12Rik lincRNA lincRNA MGP_129S1SvImJ_T0008100.1 MGP_129S1SvImJ_G0006610.1 mouse_genomes_project 5 32525999 32548194 - Gm43458 lincRNA lincRNA MGP_129S1SvImJ_T0014865.1 MGP_129S1SvImJ_G0012954.1 mouse_genomes_project 5 2469207 2469637 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070435.1 MGP_129S1SvImJ_G0029342.1 mouse_genomes_project 5 22143960 22149250 - MGP_129S1SvImJ_P0070435 Cdk5 protein_coding protein_coding MGP_129S1SvImJ_T0070436.1 MGP_129S1SvImJ_G0029342.1 mouse_genomes_project 5 22145095 22149205 - MGP_129S1SvImJ_P0070436 Cdk5 protein_coding protein_coding MGP_129S1SvImJ_T0070437.1 MGP_129S1SvImJ_G0029342.1 mouse_genomes_project 5 22146718 22148415 - Cdk5 protein_coding retained_intron MGP_129S1SvImJ_T0001617.1 MGP_129S1SvImJ_G0001534.1 mouse_genomes_project 5 51524328 51526771 - TEC TEC MGP_129S1SvImJ_T0070652.1 MGP_129S1SvImJ_G0029386.1 mouse_genomes_project 5 28176810 28188922 - MGP_129S1SvImJ_P0070652 Adgrf3 protein_coding protein_coding MGP_129S1SvImJ_T0070653.1 MGP_129S1SvImJ_G0029386.1 mouse_genomes_project 5 28176814 28179802 - MGP_129S1SvImJ_P0070653 Adgrf3 protein_coding protein_coding MGP_129S1SvImJ_T0070654.1 MGP_129S1SvImJ_G0029386.1 mouse_genomes_project 5 28185692 28187787 - Adgrf3 protein_coding processed_transcript MGP_129S1SvImJ_T0008374.1 MGP_129S1SvImJ_G0006804.1 mouse_genomes_project 5 127815543 127832959 - Gm43661 lincRNA lincRNA MGP_129S1SvImJ_T0075485.1 MGP_129S1SvImJ_G0030288.1 mouse_genomes_project 5 144713200 144748403 - MGP_129S1SvImJ_P0075485 Micall2 protein_coding protein_coding MGP_129S1SvImJ_T0075486.1 MGP_129S1SvImJ_G0030288.1 mouse_genomes_project 5 144713398 144716635 - Micall2 protein_coding retained_intron MGP_129S1SvImJ_T0075487.1 MGP_129S1SvImJ_G0030288.1 mouse_genomes_project 5 144716542 144718027 - MGP_129S1SvImJ_P0075487 Micall2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0001545.1 MGP_129S1SvImJ_G0001463.1 mouse_genomes_project 5 42203472 42205578 + TEC TEC MGP_129S1SvImJ_T0073054.1 MGP_129S1SvImJ_G0029840.1 mouse_genomes_project 5 109553471 109597207 + MGP_129S1SvImJ_P0073054 protein_coding protein_coding MGP_129S1SvImJ_T0102586.1 MGP_129S1SvImJ_G0040419.1 mouse_genomes_project 5 151426319 151435322 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0072035.1 MGP_129S1SvImJ_G0029611.1 mouse_genomes_project 5 72212291 72423412 - MGP_129S1SvImJ_P0072035 Corin protein_coding protein_coding MGP_129S1SvImJ_T0072036.1 MGP_129S1SvImJ_G0029611.1 mouse_genomes_project 5 72212292 72423147 - MGP_129S1SvImJ_P0072036 Corin protein_coding protein_coding MGP_129S1SvImJ_T0072037.1 MGP_129S1SvImJ_G0029611.1 mouse_genomes_project 5 72213752 72423372 - MGP_129S1SvImJ_P0072037 Corin protein_coding protein_coding MGP_129S1SvImJ_T0072038.1 MGP_129S1SvImJ_G0029611.1 mouse_genomes_project 5 72213752 72423378 - MGP_129S1SvImJ_P0072038 Corin protein_coding protein_coding MGP_129S1SvImJ_T0072039.1 MGP_129S1SvImJ_G0029611.1 mouse_genomes_project 5 72213764 72423378 - MGP_129S1SvImJ_P0072039 Corin protein_coding protein_coding MGP_129S1SvImJ_T0072040.1 MGP_129S1SvImJ_G0029611.1 mouse_genomes_project 5 72266260 72273380 - Corin protein_coding retained_intron MGP_129S1SvImJ_T0072041.1 MGP_129S1SvImJ_G0029611.1 mouse_genomes_project 5 72271064 72294847 - Corin protein_coding processed_transcript MGP_129S1SvImJ_T0073355.1 MGP_129S1SvImJ_G0029902.1 mouse_genomes_project 5 114849947 114892110 + MGP_129S1SvImJ_P0073355 Tpst2 protein_coding protein_coding MGP_129S1SvImJ_T0073356.1 MGP_129S1SvImJ_G0029902.1 mouse_genomes_project 5 114849960 114885875 + Tpst2 protein_coding retained_intron MGP_129S1SvImJ_T0073357.1 MGP_129S1SvImJ_G0029902.1 mouse_genomes_project 5 114849963 114892104 + MGP_129S1SvImJ_P0073357 Tpst2 protein_coding protein_coding MGP_129S1SvImJ_T0073358.1 MGP_129S1SvImJ_G0029902.1 mouse_genomes_project 5 114863043 114884573 + MGP_129S1SvImJ_P0073358 Tpst2 protein_coding protein_coding MGP_129S1SvImJ_T0073359.1 MGP_129S1SvImJ_G0029902.1 mouse_genomes_project 5 114880746 114891705 + MGP_129S1SvImJ_P0073359 Tpst2 protein_coding protein_coding MGP_129S1SvImJ_T0073360.1 MGP_129S1SvImJ_G0029902.1 mouse_genomes_project 5 114885127 114886655 + MGP_129S1SvImJ_P0073360 Tpst2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073361.1 MGP_129S1SvImJ_G0029902.1 mouse_genomes_project 5 114889644 114891712 + Tpst2 protein_coding retained_intron MGP_129S1SvImJ_T0098972.1 MGP_129S1SvImJ_G0037049.1 mouse_genomes_project 5 148354782 148355364 - Gm43378 sense_intronic sense_intronic MGP_129S1SvImJ_T0072931.1 MGP_129S1SvImJ_G0029806.1 mouse_genomes_project 5 105651163 105686177 - MGP_129S1SvImJ_P0072931 Hsd17b11 protein_coding protein_coding MGP_129S1SvImJ_T0072932.1 MGP_129S1SvImJ_G0029806.1 mouse_genomes_project 5 105664604 105686096 - MGP_129S1SvImJ_P0072932 Hsd17b11 protein_coding protein_coding MGP_129S1SvImJ_T0014868.1 MGP_129S1SvImJ_G0012957.1 mouse_genomes_project 5 3680235 3680801 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073841.1 MGP_129S1SvImJ_G0029994.1 mouse_genomes_project 5 121318912 121341847 + Hrk protein_coding processed_transcript MGP_129S1SvImJ_T0073842.1 MGP_129S1SvImJ_G0029994.1 mouse_genomes_project 5 121325428 121346479 + MGP_129S1SvImJ_P0073842 Hrk protein_coding protein_coding MGP_129S1SvImJ_T0015200.1 MGP_129S1SvImJ_G0013289.1 mouse_genomes_project 5 142803623 142807138 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073286.1 MGP_129S1SvImJ_G0029889.1 mouse_genomes_project 5 113123119 113128100 - MGP_129S1SvImJ_P0073286 Noc4l protein_coding protein_coding MGP_129S1SvImJ_T0073287.1 MGP_129S1SvImJ_G0029889.1 mouse_genomes_project 5 113123548 113124719 - Noc4l protein_coding retained_intron MGP_129S1SvImJ_T0073288.1 MGP_129S1SvImJ_G0029889.1 mouse_genomes_project 5 113125771 113127942 - Noc4l protein_coding retained_intron MGP_129S1SvImJ_T0073289.1 MGP_129S1SvImJ_G0029889.1 mouse_genomes_project 5 113125945 113128031 - Noc4l protein_coding retained_intron MGP_129S1SvImJ_T0073290.1 MGP_129S1SvImJ_G0029889.1 mouse_genomes_project 5 113126065 113128049 - Noc4l protein_coding retained_intron MGP_129S1SvImJ_T0073291.1 MGP_129S1SvImJ_G0029889.1 mouse_genomes_project 5 113127696 113128063 - Noc4l protein_coding retained_intron MGP_129S1SvImJ_T0073391.1 MGP_129S1SvImJ_G0029909.1 mouse_genomes_project 5 115033076 115035389 + MGP_129S1SvImJ_P0073391 Gm6588 protein_coding protein_coding MGP_129S1SvImJ_T0004764.1 MGP_129S1SvImJ_G0004120.1 mouse_genomes_project 5 101094037 101096073 + 4930522N08Rik antisense antisense MGP_129S1SvImJ_T0001846.1 MGP_129S1SvImJ_G0001761.1 mouse_genomes_project 5 128240380 128242824 + TEC TEC MGP_129S1SvImJ_T0001847.1 MGP_129S1SvImJ_G0001761.1 mouse_genomes_project 5 128241779 128242953 + TEC TEC MGP_129S1SvImJ_T0001722.1 MGP_129S1SvImJ_G0001637.1 mouse_genomes_project 5 76010151 76012273 + TEC TEC MGP_129S1SvImJ_T0018154.1 MGP_129S1SvImJ_G0015590.1 mouse_genomes_project 5 21387497 21388478 - processed_transcript processed_transcript MGP_129S1SvImJ_T0015000.1 MGP_129S1SvImJ_G0013089.1 mouse_genomes_project 5 54778640 54778947 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072625.1 MGP_129S1SvImJ_G0029746.1 mouse_genomes_project 5 93431792 93453467 - MGP_129S1SvImJ_P0072625 Naaa protein_coding protein_coding MGP_129S1SvImJ_T0072626.1 MGP_129S1SvImJ_G0029746.1 mouse_genomes_project 5 93431797 93438223 - Naaa protein_coding retained_intron MGP_129S1SvImJ_T0072627.1 MGP_129S1SvImJ_G0029746.1 mouse_genomes_project 5 93433913 93453462 - MGP_129S1SvImJ_P0072627 Naaa protein_coding protein_coding MGP_129S1SvImJ_T0072628.1 MGP_129S1SvImJ_G0029746.1 mouse_genomes_project 5 93435036 93447997 - MGP_129S1SvImJ_P0072628 Naaa protein_coding protein_coding MGP_129S1SvImJ_T0072629.1 MGP_129S1SvImJ_G0029746.1 mouse_genomes_project 5 93451113 93453462 - Naaa protein_coding retained_intron MGP_129S1SvImJ_T0010757.1 MGP_129S1SvImJ_G0008873.1 mouse_genomes_project 5 148471330 148471456 + Gm44405 miRNA miRNA MGP_129S1SvImJ_T0073130.1 MGP_129S1SvImJ_G0029853.1 mouse_genomes_project 5 110413864 110453371 + MGP_129S1SvImJ_P0073130 Pigg protein_coding protein_coding MGP_129S1SvImJ_T0073131.1 MGP_129S1SvImJ_G0029853.1 mouse_genomes_project 5 110413864 110454493 + MGP_129S1SvImJ_P0073131 Pigg protein_coding protein_coding MGP_129S1SvImJ_T0073132.1 MGP_129S1SvImJ_G0029853.1 mouse_genomes_project 5 110413891 110453376 + MGP_129S1SvImJ_P0073132 Pigg protein_coding protein_coding MGP_129S1SvImJ_T0014920.1 MGP_129S1SvImJ_G0013009.1 mouse_genomes_project 5 21034076 21034701 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072180.1 MGP_129S1SvImJ_G0029635.1 mouse_genomes_project 5 75107889 75155501 - MGP_129S1SvImJ_P0072180 Chic2 protein_coding protein_coding MGP_129S1SvImJ_T0072181.1 MGP_129S1SvImJ_G0029635.1 mouse_genomes_project 5 75121081 75155039 - Chic2 protein_coding retained_intron MGP_129S1SvImJ_T0073268.1 MGP_129S1SvImJ_G0029886.1 mouse_genomes_project 5 112787371 112790515 - MGP_129S1SvImJ_P0073268 P2rx2 protein_coding protein_coding MGP_129S1SvImJ_T0073269.1 MGP_129S1SvImJ_G0029886.1 mouse_genomes_project 5 112787371 112790772 - MGP_129S1SvImJ_P0073269 P2rx2 protein_coding protein_coding MGP_129S1SvImJ_T0073270.1 MGP_129S1SvImJ_G0029886.1 mouse_genomes_project 5 112787371 112790515 - MGP_129S1SvImJ_P0073270 P2rx2 protein_coding protein_coding MGP_129S1SvImJ_T0073271.1 MGP_129S1SvImJ_G0029886.1 mouse_genomes_project 5 112787372 112790536 - MGP_129S1SvImJ_P0073271 P2rx2 protein_coding protein_coding MGP_129S1SvImJ_T0073272.1 MGP_129S1SvImJ_G0029886.1 mouse_genomes_project 5 112787529 112790709 - P2rx2 protein_coding retained_intron MGP_129S1SvImJ_T0073273.1 MGP_129S1SvImJ_G0029886.1 mouse_genomes_project 5 112787529 112790709 - MGP_129S1SvImJ_P0073273 P2rx2 protein_coding protein_coding MGP_129S1SvImJ_T0071905.1 MGP_129S1SvImJ_G0029589.1 mouse_genomes_project 5 66027299 66042323 - Apbb2 protein_coding retained_intron MGP_129S1SvImJ_T0071906.1 MGP_129S1SvImJ_G0029589.1 mouse_genomes_project 5 66027321 66359909 - MGP_129S1SvImJ_P0071906 Apbb2 protein_coding protein_coding MGP_129S1SvImJ_T0071907.1 MGP_129S1SvImJ_G0029589.1 mouse_genomes_project 5 66027324 66359935 - MGP_129S1SvImJ_P0071907 Apbb2 protein_coding protein_coding MGP_129S1SvImJ_T0071908.1 MGP_129S1SvImJ_G0029589.1 mouse_genomes_project 5 66027324 66359832 - MGP_129S1SvImJ_P0071908 Apbb2 protein_coding protein_coding MGP_129S1SvImJ_T0071909.1 MGP_129S1SvImJ_G0029589.1 mouse_genomes_project 5 66027436 66359814 - MGP_129S1SvImJ_P0071909 Apbb2 protein_coding protein_coding MGP_129S1SvImJ_T0071910.1 MGP_129S1SvImJ_G0029589.1 mouse_genomes_project 5 66029246 66229687 - Apbb2 protein_coding retained_intron MGP_129S1SvImJ_T0071911.1 MGP_129S1SvImJ_G0029589.1 mouse_genomes_project 5 66030457 66067640 - Apbb2 protein_coding processed_transcript MGP_129S1SvImJ_T0071912.1 MGP_129S1SvImJ_G0029589.1 mouse_genomes_project 5 66030474 66359822 - MGP_129S1SvImJ_P0071912 Apbb2 protein_coding protein_coding MGP_129S1SvImJ_T0071913.1 MGP_129S1SvImJ_G0029589.1 mouse_genomes_project 5 66030474 66359822 - MGP_129S1SvImJ_P0071913 Apbb2 protein_coding protein_coding MGP_129S1SvImJ_T0071914.1 MGP_129S1SvImJ_G0029589.1 mouse_genomes_project 5 66030791 66229686 - MGP_129S1SvImJ_P0071914 Apbb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071915.1 MGP_129S1SvImJ_G0029589.1 mouse_genomes_project 5 66036169 66067441 - Apbb2 protein_coding processed_transcript MGP_129S1SvImJ_T0071916.1 MGP_129S1SvImJ_G0029589.1 mouse_genomes_project 5 66133025 66359834 - Apbb2 protein_coding retained_intron MGP_129S1SvImJ_T0071917.1 MGP_129S1SvImJ_G0029589.1 mouse_genomes_project 5 66133025 66359821 - Apbb2 protein_coding retained_intron MGP_129S1SvImJ_T0071918.1 MGP_129S1SvImJ_G0029589.1 mouse_genomes_project 5 66188662 66359791 - MGP_129S1SvImJ_P0071918 Apbb2 protein_coding protein_coding MGP_129S1SvImJ_T0071919.1 MGP_129S1SvImJ_G0029589.1 mouse_genomes_project 5 66188675 66255617 - MGP_129S1SvImJ_P0071919 Apbb2 protein_coding protein_coding MGP_129S1SvImJ_T0071920.1 MGP_129S1SvImJ_G0029589.1 mouse_genomes_project 5 66188704 66359822 - MGP_129S1SvImJ_P0071920 Apbb2 protein_coding protein_coding MGP_129S1SvImJ_T0071921.1 MGP_129S1SvImJ_G0029589.1 mouse_genomes_project 5 66188908 66359925 - MGP_129S1SvImJ_P0071921 Apbb2 protein_coding protein_coding MGP_129S1SvImJ_T0071922.1 MGP_129S1SvImJ_G0029589.1 mouse_genomes_project 5 66188941 66255624 - MGP_129S1SvImJ_P0071922 Apbb2 protein_coding protein_coding MGP_129S1SvImJ_T0071923.1 MGP_129S1SvImJ_G0029589.1 mouse_genomes_project 5 66188947 66287767 - MGP_129S1SvImJ_P0071923 Apbb2 protein_coding protein_coding MGP_129S1SvImJ_T0071924.1 MGP_129S1SvImJ_G0029589.1 mouse_genomes_project 5 66198598 66359823 - Apbb2 protein_coding retained_intron MGP_129S1SvImJ_T0071925.1 MGP_129S1SvImJ_G0029589.1 mouse_genomes_project 5 66281508 66359839 - Apbb2 protein_coding retained_intron MGP_129S1SvImJ_T0015006.1 MGP_129S1SvImJ_G0013095.1 mouse_genomes_project 5 56741087 56741718 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008059.1 MGP_129S1SvImJ_G0006583.1 mouse_genomes_project 5 14217992 14220868 + Gm28710 lincRNA lincRNA MGP_129S1SvImJ_T0001470.1 MGP_129S1SvImJ_G0001391.1 mouse_genomes_project 5 10706293 10710201 + TEC TEC MGP_129S1SvImJ_T0008275.1 MGP_129S1SvImJ_G0006744.1 mouse_genomes_project 5 110472783 110473258 - Gm42517 lincRNA lincRNA MGP_129S1SvImJ_T0075245.1 MGP_129S1SvImJ_G0030239.1 mouse_genomes_project 5 142420163 142423759 - MGP_129S1SvImJ_P0075245 Irs3 protein_coding protein_coding MGP_129S1SvImJ_T0075246.1 MGP_129S1SvImJ_G0030239.1 mouse_genomes_project 5 142420164 142423936 - MGP_129S1SvImJ_P0075246 Irs3 protein_coding protein_coding MGP_129S1SvImJ_T0008145.1 MGP_129S1SvImJ_G0006642.1 mouse_genomes_project 5 51987652 52002455 + Gm42746 lincRNA lincRNA MGP_129S1SvImJ_T0071403.1 MGP_129S1SvImJ_G0029504.1 mouse_genomes_project 5 36207945 36212043 - MGP_129S1SvImJ_P0071403 Msx1 protein_coding protein_coding MGP_129S1SvImJ_T0071404.1 MGP_129S1SvImJ_G0029504.1 mouse_genomes_project 5 36210162 36212042 - Msx1 protein_coding retained_intron MGP_129S1SvImJ_T0071575.1 MGP_129S1SvImJ_G0029535.1 mouse_genomes_project 5 44239077 44245892 - Fam184b protein_coding retained_intron MGP_129S1SvImJ_T0071576.1 MGP_129S1SvImJ_G0029535.1 mouse_genomes_project 5 44239077 44349935 - MGP_129S1SvImJ_P0071576 Fam184b protein_coding protein_coding MGP_129S1SvImJ_T0008096.1 MGP_129S1SvImJ_G0006607.1 mouse_genomes_project 5 30478260 30487214 - Gm7596 lincRNA lincRNA MGP_129S1SvImJ_T0008097.1 MGP_129S1SvImJ_G0006607.1 mouse_genomes_project 5 30478286 30482610 - Gm7596 lincRNA lincRNA MGP_129S1SvImJ_T0073798.1 MGP_129S1SvImJ_G0029985.1 mouse_genomes_project 5 120354312 120359275 - MGP_129S1SvImJ_P0073798 Pebp1 protein_coding protein_coding MGP_129S1SvImJ_T0073799.1 MGP_129S1SvImJ_G0029985.1 mouse_genomes_project 5 120354797 120359233 - MGP_129S1SvImJ_P0073799 Pebp1 protein_coding protein_coding MGP_129S1SvImJ_T0073800.1 MGP_129S1SvImJ_G0029985.1 mouse_genomes_project 5 120355002 120359218 - MGP_129S1SvImJ_P0073800 Pebp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073801.1 MGP_129S1SvImJ_G0029985.1 mouse_genomes_project 5 120357443 120359175 - Pebp1 protein_coding retained_intron MGP_129S1SvImJ_T0001738.1 MGP_129S1SvImJ_G0001653.1 mouse_genomes_project 5 94397990 94400080 + TEC TEC MGP_129S1SvImJ_T0070285.1 MGP_129S1SvImJ_G0029313.1 mouse_genomes_project 5 18517592 18594886 - MGP_129S1SvImJ_P0070285 Ptpn12 protein_coding protein_coding MGP_129S1SvImJ_T0070286.1 MGP_129S1SvImJ_G0029313.1 mouse_genomes_project 5 18529541 18533340 - Ptpn12 protein_coding retained_intron MGP_129S1SvImJ_T0070287.1 MGP_129S1SvImJ_G0029313.1 mouse_genomes_project 5 18529715 18541536 - Ptpn12 protein_coding retained_intron MGP_129S1SvImJ_T0070288.1 MGP_129S1SvImJ_G0029313.1 mouse_genomes_project 5 18533216 18594728 - MGP_129S1SvImJ_P0070288 Ptpn12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070289.1 MGP_129S1SvImJ_G0029313.1 mouse_genomes_project 5 18537290 18594872 - MGP_129S1SvImJ_P0070289 Ptpn12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070290.1 MGP_129S1SvImJ_G0029313.1 mouse_genomes_project 5 18541373 18594700 - MGP_129S1SvImJ_P0070290 Ptpn12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074419.1 MGP_129S1SvImJ_G0030094.1 mouse_genomes_project 5 128177270 128241988 - MGP_129S1SvImJ_P0074419 Sbno1 protein_coding protein_coding MGP_129S1SvImJ_T0074420.1 MGP_129S1SvImJ_G0030094.1 mouse_genomes_project 5 128177276 128241294 - MGP_129S1SvImJ_P0074420 Sbno1 protein_coding protein_coding MGP_129S1SvImJ_T0074421.1 MGP_129S1SvImJ_G0030094.1 mouse_genomes_project 5 128183098 128227739 - MGP_129S1SvImJ_P0074421 Sbno1 protein_coding protein_coding MGP_129S1SvImJ_T0074422.1 MGP_129S1SvImJ_G0030094.1 mouse_genomes_project 5 128186526 128195073 - Sbno1 protein_coding retained_intron MGP_129S1SvImJ_T0074423.1 MGP_129S1SvImJ_G0030094.1 mouse_genomes_project 5 128196200 128197172 - Sbno1 protein_coding retained_intron MGP_129S1SvImJ_T0074424.1 MGP_129S1SvImJ_G0030094.1 mouse_genomes_project 5 128201940 128202592 - Sbno1 protein_coding retained_intron MGP_129S1SvImJ_T0074425.1 MGP_129S1SvImJ_G0030094.1 mouse_genomes_project 5 128202588 128204100 - Sbno1 protein_coding retained_intron MGP_129S1SvImJ_T0074426.1 MGP_129S1SvImJ_G0030094.1 mouse_genomes_project 5 128204634 128241277 - MGP_129S1SvImJ_P0074426 Sbno1 protein_coding protein_coding MGP_129S1SvImJ_T0074427.1 MGP_129S1SvImJ_G0030094.1 mouse_genomes_project 5 128204650 128207944 - Sbno1 protein_coding retained_intron MGP_129S1SvImJ_T0074428.1 MGP_129S1SvImJ_G0030094.1 mouse_genomes_project 5 128204652 128242075 - MGP_129S1SvImJ_P0074428 Sbno1 protein_coding protein_coding MGP_129S1SvImJ_T0074429.1 MGP_129S1SvImJ_G0030094.1 mouse_genomes_project 5 128207609 128208808 - Sbno1 protein_coding retained_intron MGP_129S1SvImJ_T0074430.1 MGP_129S1SvImJ_G0030094.1 mouse_genomes_project 5 128207609 128242031 - MGP_129S1SvImJ_P0074430 Sbno1 protein_coding protein_coding MGP_129S1SvImJ_T0074431.1 MGP_129S1SvImJ_G0030094.1 mouse_genomes_project 5 128210292 128241276 - MGP_129S1SvImJ_P0074431 Sbno1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074432.1 MGP_129S1SvImJ_G0030094.1 mouse_genomes_project 5 128211665 128218973 - MGP_129S1SvImJ_P0074432 Sbno1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074433.1 MGP_129S1SvImJ_G0030094.1 mouse_genomes_project 5 128220338 128241268 - MGP_129S1SvImJ_P0074433 Sbno1 protein_coding protein_coding MGP_129S1SvImJ_T0074434.1 MGP_129S1SvImJ_G0030094.1 mouse_genomes_project 5 128223328 128241252 - MGP_129S1SvImJ_P0074434 Sbno1 protein_coding protein_coding MGP_129S1SvImJ_T0074435.1 MGP_129S1SvImJ_G0030094.1 mouse_genomes_project 5 128223560 128233051 - MGP_129S1SvImJ_P0074435 Sbno1 protein_coding protein_coding MGP_129S1SvImJ_T0074436.1 MGP_129S1SvImJ_G0030094.1 mouse_genomes_project 5 128239204 128241226 - Sbno1 protein_coding retained_intron MGP_129S1SvImJ_T0001592.1 MGP_129S1SvImJ_G0001509.1 mouse_genomes_project 5 47908196 47910647 - TEC TEC MGP_129S1SvImJ_T0074057.1 MGP_129S1SvImJ_G0030040.1 mouse_genomes_project 5 125433291 125646798 - MGP_129S1SvImJ_P0074057 protein_coding protein_coding MGP_129S1SvImJ_T0074058.1 MGP_129S1SvImJ_G0030040.1 mouse_genomes_project 5 125437011 125644779 - MGP_129S1SvImJ_P0074058 protein_coding protein_coding MGP_129S1SvImJ_T0074059.1 MGP_129S1SvImJ_G0030040.1 mouse_genomes_project 5 125437103 125445010 - protein_coding retained_intron MGP_129S1SvImJ_T0074060.1 MGP_129S1SvImJ_G0030040.1 mouse_genomes_project 5 125437103 125514423 - MGP_129S1SvImJ_P0074060 protein_coding protein_coding MGP_129S1SvImJ_T0074061.1 MGP_129S1SvImJ_G0030040.1 mouse_genomes_project 5 125453653 125454889 - protein_coding retained_intron MGP_129S1SvImJ_T0074062.1 MGP_129S1SvImJ_G0030040.1 mouse_genomes_project 5 125460368 125502976 - protein_coding processed_transcript MGP_129S1SvImJ_T0074063.1 MGP_129S1SvImJ_G0030040.1 mouse_genomes_project 5 125460374 125483340 - protein_coding processed_transcript MGP_129S1SvImJ_T0074064.1 MGP_129S1SvImJ_G0030040.1 mouse_genomes_project 5 125471220 125647049 - MGP_129S1SvImJ_P0074064 protein_coding protein_coding MGP_129S1SvImJ_T0074065.1 MGP_129S1SvImJ_G0030040.1 mouse_genomes_project 5 125473887 125596563 - MGP_129S1SvImJ_P0074065 protein_coding protein_coding MGP_129S1SvImJ_T0074066.1 MGP_129S1SvImJ_G0030040.1 mouse_genomes_project 5 125483367 125504623 - protein_coding processed_transcript MGP_129S1SvImJ_T0074067.1 MGP_129S1SvImJ_G0030040.1 mouse_genomes_project 5 125514397 125644845 - protein_coding processed_transcript MGP_129S1SvImJ_T0015207.1 MGP_129S1SvImJ_G0013296.1 mouse_genomes_project 5 144997055 144997547 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001642.1 MGP_129S1SvImJ_G0001559.1 mouse_genomes_project 5 62188120 62191431 - TEC TEC MGP_129S1SvImJ_T0073517.1 MGP_129S1SvImJ_G0029934.1 mouse_genomes_project 5 116976589 116996341 - MGP_129S1SvImJ_P0073517 Foxn4 protein_coding protein_coding MGP_129S1SvImJ_T0073518.1 MGP_129S1SvImJ_G0029934.1 mouse_genomes_project 5 116978010 116985677 - MGP_129S1SvImJ_P0073518 Foxn4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073519.1 MGP_129S1SvImJ_G0029934.1 mouse_genomes_project 5 116982899 116996236 - MGP_129S1SvImJ_P0073519 Foxn4 protein_coding protein_coding MGP_129S1SvImJ_T0073520.1 MGP_129S1SvImJ_G0029934.1 mouse_genomes_project 5 116985262 116996283 - Foxn4 protein_coding retained_intron MGP_129S1SvImJ_T0004885.1 MGP_129S1SvImJ_G0004206.1 mouse_genomes_project 5 142661624 142662080 + Gm43495 antisense antisense MGP_129S1SvImJ_T0014896.1 MGP_129S1SvImJ_G0012985.1 mouse_genomes_project 5 17748136 17748476 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0071594.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 46766058 47106766 + MGP_129S1SvImJ_P0071594 Slit2 protein_coding protein_coding MGP_129S1SvImJ_T0071595.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 46766074 46774356 + Slit2 protein_coding retained_intron MGP_129S1SvImJ_T0071596.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 46766074 46974518 + Slit2 protein_coding retained_intron MGP_129S1SvImJ_T0071597.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 46766074 47104544 + MGP_129S1SvImJ_P0071597 Slit2 protein_coding protein_coding MGP_129S1SvImJ_T0071598.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 46766074 47104544 + MGP_129S1SvImJ_P0071598 Slit2 protein_coding protein_coding MGP_129S1SvImJ_T0071599.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 46766074 47103429 + MGP_129S1SvImJ_P0071599 Slit2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071600.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 46766074 47104544 + MGP_129S1SvImJ_P0071600 Slit2 protein_coding protein_coding MGP_129S1SvImJ_T0071601.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 46766078 46872925 + Slit2 protein_coding processed_transcript MGP_129S1SvImJ_T0071602.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 46766097 46768589 + Slit2 protein_coding retained_intron MGP_129S1SvImJ_T0071603.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 46767914 46964557 + Slit2 protein_coding processed_transcript MGP_129S1SvImJ_T0071604.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 46771825 46984181 + MGP_129S1SvImJ_P0071604 Slit2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071605.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 46960554 46985385 + Slit2 protein_coding processed_transcript MGP_129S1SvImJ_T0071606.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 46965597 46970391 + Slit2 protein_coding retained_intron MGP_129S1SvImJ_T0071607.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 46973462 47016423 + Slit2 protein_coding retained_intron MGP_129S1SvImJ_T0071608.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 46980827 47026710 + Slit2 protein_coding processed_transcript MGP_129S1SvImJ_T0071609.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 47020264 47035041 + Slit2 protein_coding processed_transcript MGP_129S1SvImJ_T0071610.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 47028078 47080641 + Slit2 protein_coding retained_intron MGP_129S1SvImJ_T0071611.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 47035089 47056062 + MGP_129S1SvImJ_P0071611 Slit2 protein_coding protein_coding MGP_129S1SvImJ_T0071612.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 47041666 47044543 + Slit2 protein_coding retained_intron MGP_129S1SvImJ_T0071613.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 47045107 47059130 + Slit2 protein_coding retained_intron MGP_129S1SvImJ_T0071614.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 47053037 47056016 + Slit2 protein_coding retained_intron MGP_129S1SvImJ_T0071615.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 47072935 47079492 + Slit2 protein_coding retained_intron MGP_129S1SvImJ_T0071616.1 MGP_129S1SvImJ_G0029538.1 mouse_genomes_project 5 47079470 47101545 + MGP_129S1SvImJ_P0071616 Slit2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0014948.1 MGP_129S1SvImJ_G0013037.1 mouse_genomes_project 5 29353836 29354283 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0074915.1 MGP_129S1SvImJ_G0030178.1 mouse_genomes_project 5 139755922 139758215 - MGP_129S1SvImJ_P0074915 Fzd9 protein_coding protein_coding MGP_129S1SvImJ_T0073225.1 MGP_129S1SvImJ_G0029878.1 mouse_genomes_project 5 112531164 112565989 + MGP_129S1SvImJ_P0073225 Zfp605 protein_coding protein_coding MGP_129S1SvImJ_T0073226.1 MGP_129S1SvImJ_G0029878.1 mouse_genomes_project 5 112531408 112563654 + Zfp605 protein_coding processed_transcript MGP_129S1SvImJ_T0073227.1 MGP_129S1SvImJ_G0029878.1 mouse_genomes_project 5 112531423 112563612 + MGP_129S1SvImJ_P0073227 Zfp605 protein_coding protein_coding MGP_129S1SvImJ_T0073228.1 MGP_129S1SvImJ_G0029878.1 mouse_genomes_project 5 112533124 112565296 + MGP_129S1SvImJ_P0073228 Zfp605 protein_coding protein_coding MGP_129S1SvImJ_T0075922.1 MGP_129S1SvImJ_G0030389.1 mouse_genomes_project 5 152980770 153065789 - MGP_129S1SvImJ_P0075922 Flt3 protein_coding protein_coding MGP_129S1SvImJ_T0075923.1 MGP_129S1SvImJ_G0030389.1 mouse_genomes_project 5 153017216 153065789 - Flt3 protein_coding processed_transcript MGP_129S1SvImJ_T0008190.1 MGP_129S1SvImJ_G0006678.1 mouse_genomes_project 5 76672686 76701324 + lincRNA lincRNA MGP_129S1SvImJ_T0008191.1 MGP_129S1SvImJ_G0006678.1 mouse_genomes_project 5 76672977 76701280 + lincRNA lincRNA MGP_129S1SvImJ_T0001639.1 MGP_129S1SvImJ_G0001556.1 mouse_genomes_project 5 58424352 58426592 + TEC TEC MGP_129S1SvImJ_T0015136.1 MGP_129S1SvImJ_G0013225.1 mouse_genomes_project 5 110961294 110962697 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075709.1 MGP_129S1SvImJ_G0030337.1 mouse_genomes_project 5 149167557 149206521 + MGP_129S1SvImJ_P0075709 Eif2ak1 protein_coding protein_coding MGP_129S1SvImJ_T0075710.1 MGP_129S1SvImJ_G0030337.1 mouse_genomes_project 5 149167600 149182709 + Eif2ak1 protein_coding retained_intron MGP_129S1SvImJ_T0075711.1 MGP_129S1SvImJ_G0030337.1 mouse_genomes_project 5 149167716 149176499 + Eif2ak1 protein_coding retained_intron MGP_129S1SvImJ_T0001766.1 MGP_129S1SvImJ_G0001681.1 mouse_genomes_project 5 108620536 108623455 - TEC TEC MGP_129S1SvImJ_T0014913.1 MGP_129S1SvImJ_G0013002.1 mouse_genomes_project 5 20294890 20295263 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004803.1 MGP_129S1SvImJ_G0004147.1 mouse_genomes_project 5 117548790 117550010 - 4930515G01Rik antisense antisense MGP_129S1SvImJ_T0098602.1 MGP_129S1SvImJ_G0036687.1 mouse_genomes_project 5 52463521 52463631 + Gm26486 rRNA rRNA MGP_129S1SvImJ_T0014871.1 MGP_129S1SvImJ_G0012960.1 mouse_genomes_project 5 4824616 4825356 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072783.1 MGP_129S1SvImJ_G0029780.1 mouse_genomes_project 5 101404519 101427356 - MGP_129S1SvImJ_P0072783 Hnrnpd protein_coding protein_coding MGP_129S1SvImJ_T0072784.1 MGP_129S1SvImJ_G0029780.1 mouse_genomes_project 5 101409152 101427355 - MGP_129S1SvImJ_P0072784 Hnrnpd protein_coding protein_coding MGP_129S1SvImJ_T0072785.1 MGP_129S1SvImJ_G0029780.1 mouse_genomes_project 5 101409552 101427335 - MGP_129S1SvImJ_P0072785 Hnrnpd protein_coding protein_coding MGP_129S1SvImJ_T0072786.1 MGP_129S1SvImJ_G0029780.1 mouse_genomes_project 5 101409556 101427353 - MGP_129S1SvImJ_P0072786 Hnrnpd protein_coding protein_coding MGP_129S1SvImJ_T0072787.1 MGP_129S1SvImJ_G0029780.1 mouse_genomes_project 5 101409557 101425092 - MGP_129S1SvImJ_P0072787 Hnrnpd protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072788.1 MGP_129S1SvImJ_G0029780.1 mouse_genomes_project 5 101409705 101414729 - MGP_129S1SvImJ_P0072788 Hnrnpd protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072789.1 MGP_129S1SvImJ_G0029780.1 mouse_genomes_project 5 101409722 101413305 - MGP_129S1SvImJ_P0072789 Hnrnpd protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072790.1 MGP_129S1SvImJ_G0029780.1 mouse_genomes_project 5 101410837 101427042 - MGP_129S1SvImJ_P0072790 Hnrnpd protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072791.1 MGP_129S1SvImJ_G0029780.1 mouse_genomes_project 5 101413297 101414942 - Hnrnpd protein_coding retained_intron MGP_129S1SvImJ_T0101731.1 MGP_129S1SvImJ_G0039731.1 mouse_genomes_project 5 88812766 88815421 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101732.1 MGP_129S1SvImJ_G0039731.1 mouse_genomes_project 5 88812925 88814050 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0001752.1 MGP_129S1SvImJ_G0001667.1 mouse_genomes_project 5 102400903 102403253 + TEC TEC MGP_129S1SvImJ_T0073460.1 MGP_129S1SvImJ_G0029924.1 mouse_genomes_project 5 116474315 116481140 - MGP_129S1SvImJ_P0073460 Tmem119 protein_coding protein_coding MGP_129S1SvImJ_T0073461.1 MGP_129S1SvImJ_G0029924.1 mouse_genomes_project 5 116476224 116481070 - MGP_129S1SvImJ_P0073461 Tmem119 protein_coding protein_coding MGP_129S1SvImJ_T0073214.1 MGP_129S1SvImJ_G0029877.1 mouse_genomes_project 5 112525059 112526417 - Gtpbp6 protein_coding retained_intron MGP_129S1SvImJ_T0073215.1 MGP_129S1SvImJ_G0029877.1 mouse_genomes_project 5 112525060 112528284 - Gtpbp6 protein_coding retained_intron MGP_129S1SvImJ_T0073216.1 MGP_129S1SvImJ_G0029877.1 mouse_genomes_project 5 112525102 112529254 - MGP_129S1SvImJ_P0073216 Gtpbp6 protein_coding protein_coding MGP_129S1SvImJ_T0073217.1 MGP_129S1SvImJ_G0029877.1 mouse_genomes_project 5 112525989 112528258 - Gtpbp6 protein_coding processed_transcript MGP_129S1SvImJ_T0073218.1 MGP_129S1SvImJ_G0029877.1 mouse_genomes_project 5 112526313 112528498 - MGP_129S1SvImJ_P0073218 Gtpbp6 protein_coding protein_coding MGP_129S1SvImJ_T0073219.1 MGP_129S1SvImJ_G0029877.1 mouse_genomes_project 5 112526872 112528006 - Gtpbp6 protein_coding retained_intron MGP_129S1SvImJ_T0073220.1 MGP_129S1SvImJ_G0029877.1 mouse_genomes_project 5 112527730 112529223 - Gtpbp6 protein_coding processed_transcript MGP_129S1SvImJ_T0073221.1 MGP_129S1SvImJ_G0029877.1 mouse_genomes_project 5 112527782 112528690 - Gtpbp6 protein_coding retained_intron MGP_129S1SvImJ_T0073222.1 MGP_129S1SvImJ_G0029877.1 mouse_genomes_project 5 112527929 112528514 - Gtpbp6 protein_coding retained_intron MGP_129S1SvImJ_T0073223.1 MGP_129S1SvImJ_G0029877.1 mouse_genomes_project 5 112528117 112528794 - Gtpbp6 protein_coding retained_intron MGP_129S1SvImJ_T0073224.1 MGP_129S1SvImJ_G0029877.1 mouse_genomes_project 5 112528130 112529244 - Gtpbp6 protein_coding retained_intron MGP_129S1SvImJ_T0001747.1 MGP_129S1SvImJ_G0001662.1 mouse_genomes_project 5 99367123 99369562 + TEC TEC MGP_129S1SvImJ_T0075712.1 MGP_129S1SvImJ_G0030338.1 mouse_genomes_project 5 149193006 149197309 - MGP_129S1SvImJ_P0075712 Ankrd61 protein_coding protein_coding MGP_129S1SvImJ_T0075713.1 MGP_129S1SvImJ_G0030338.1 mouse_genomes_project 5 149193006 149197272 - MGP_129S1SvImJ_P0075713 Ankrd61 protein_coding protein_coding MGP_129S1SvImJ_T0075714.1 MGP_129S1SvImJ_G0030338.1 mouse_genomes_project 5 149193008 149199930 - MGP_129S1SvImJ_P0075714 Ankrd61 protein_coding protein_coding MGP_129S1SvImJ_T0071577.1 MGP_129S1SvImJ_G0029536.1 mouse_genomes_project 5 44382740 44414340 + MGP_129S1SvImJ_P0071577 Ncapg protein_coding protein_coding MGP_129S1SvImJ_T0071578.1 MGP_129S1SvImJ_G0029536.1 mouse_genomes_project 5 44389838 44413921 + Ncapg protein_coding retained_intron MGP_129S1SvImJ_T0071579.1 MGP_129S1SvImJ_G0029536.1 mouse_genomes_project 5 44391689 44393907 + Ncapg protein_coding retained_intron MGP_129S1SvImJ_T0071580.1 MGP_129S1SvImJ_G0029536.1 mouse_genomes_project 5 44391740 44413867 + Ncapg protein_coding retained_intron MGP_129S1SvImJ_T0071581.1 MGP_129S1SvImJ_G0029536.1 mouse_genomes_project 5 44405843 44410724 + Ncapg protein_coding retained_intron MGP_129S1SvImJ_T0071584.1 MGP_129S1SvImJ_G0029536.1 mouse_genomes_project 5 44412459 44413864 + Ncapg protein_coding retained_intron MGP_129S1SvImJ_T0001645.1 MGP_129S1SvImJ_G0001561.1 mouse_genomes_project 5 63816778 63819091 + TEC TEC MGP_129S1SvImJ_T0008073.1 MGP_129S1SvImJ_G0006591.1 mouse_genomes_project 5 21540834 21551301 + lincRNA lincRNA MGP_129S1SvImJ_T0071028.1 MGP_129S1SvImJ_G0029444.1 mouse_genomes_project 5 31507586 31545396 + MGP_129S1SvImJ_P0071028 Maea protein_coding protein_coding MGP_129S1SvImJ_T0071029.1 MGP_129S1SvImJ_G0029444.1 mouse_genomes_project 5 31507638 31534799 + MGP_129S1SvImJ_P0071029 Maea protein_coding protein_coding MGP_129S1SvImJ_T0071030.1 MGP_129S1SvImJ_G0029444.1 mouse_genomes_project 5 31507642 31532456 + MGP_129S1SvImJ_P0071030 Maea protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071031.1 MGP_129S1SvImJ_G0029444.1 mouse_genomes_project 5 31508262 31532507 + MGP_129S1SvImJ_P0071031 Maea protein_coding protein_coding MGP_129S1SvImJ_T0071032.1 MGP_129S1SvImJ_G0029444.1 mouse_genomes_project 5 31534674 31543921 + Maea protein_coding retained_intron MGP_129S1SvImJ_T0071033.1 MGP_129S1SvImJ_G0029444.1 mouse_genomes_project 5 31543696 31544649 + Maea protein_coding retained_intron MGP_129S1SvImJ_T0074632.1 MGP_129S1SvImJ_G0030131.1 mouse_genomes_project 5 133886513 133908689 - MGP_129S1SvImJ_P0074632 Psph protein_coding protein_coding MGP_129S1SvImJ_T0074633.1 MGP_129S1SvImJ_G0030131.1 mouse_genomes_project 5 133890193 133893127 - Psph protein_coding processed_transcript MGP_129S1SvImJ_T0074634.1 MGP_129S1SvImJ_G0030131.1 mouse_genomes_project 5 133890269 133900744 - MGP_129S1SvImJ_P0074634 Psph protein_coding protein_coding MGP_129S1SvImJ_T0074635.1 MGP_129S1SvImJ_G0030131.1 mouse_genomes_project 5 133892671 133908693 - MGP_129S1SvImJ_P0074635 Psph protein_coding protein_coding MGP_129S1SvImJ_T0074636.1 MGP_129S1SvImJ_G0030131.1 mouse_genomes_project 5 133893376 133900737 - Psph protein_coding retained_intron MGP_129S1SvImJ_T0074637.1 MGP_129S1SvImJ_G0030131.1 mouse_genomes_project 5 133898395 133908791 - Psph protein_coding retained_intron MGP_129S1SvImJ_T0074638.1 MGP_129S1SvImJ_G0030131.1 mouse_genomes_project 5 133900911 133908746 - Psph protein_coding processed_transcript MGP_129S1SvImJ_T0001646.1 MGP_129S1SvImJ_G0001562.1 mouse_genomes_project 5 64058617 64059571 + TEC TEC MGP_129S1SvImJ_T0008360.1 MGP_129S1SvImJ_G0006797.1 mouse_genomes_project 5 124046252 124046962 + Gm15749 lincRNA lincRNA MGP_129S1SvImJ_T0004769.1 MGP_129S1SvImJ_G0004124.1 mouse_genomes_project 5 102355644 102362012 - 4930458D05Rik antisense antisense MGP_129S1SvImJ_T0070329.1 MGP_129S1SvImJ_G0029323.1 mouse_genomes_project 5 19336444 19364007 - MGP_129S1SvImJ_P0070329 Dnajc2 protein_coding protein_coding MGP_129S1SvImJ_T0070330.1 MGP_129S1SvImJ_G0029323.1 mouse_genomes_project 5 19336446 19363875 - MGP_129S1SvImJ_P0070330 Dnajc2 protein_coding protein_coding MGP_129S1SvImJ_T0070331.1 MGP_129S1SvImJ_G0029323.1 mouse_genomes_project 5 19336453 19363993 - Dnajc2 protein_coding retained_intron MGP_129S1SvImJ_T0070332.1 MGP_129S1SvImJ_G0029323.1 mouse_genomes_project 5 19345721 19348009 - Dnajc2 protein_coding retained_intron MGP_129S1SvImJ_T0070333.1 MGP_129S1SvImJ_G0029323.1 mouse_genomes_project 5 19351178 19363977 - Dnajc2 protein_coding retained_intron MGP_129S1SvImJ_T0070334.1 MGP_129S1SvImJ_G0029323.1 mouse_genomes_project 5 19352162 19364008 - MGP_129S1SvImJ_P0070334 Dnajc2 protein_coding protein_coding MGP_129S1SvImJ_T0015133.1 MGP_129S1SvImJ_G0013222.1 mouse_genomes_project 5 110213174 110214856 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075996.1 MGP_129S1SvImJ_G0030399.1 mouse_genomes_project 5 154846975 154851187 - MGP_129S1SvImJ_P0075996 Hmgb1 protein_coding protein_coding MGP_129S1SvImJ_T0075997.1 MGP_129S1SvImJ_G0030399.1 mouse_genomes_project 5 154846996 154998209 - MGP_129S1SvImJ_P0075997 Hmgb1 protein_coding protein_coding MGP_129S1SvImJ_T0075998.1 MGP_129S1SvImJ_G0030399.1 mouse_genomes_project 5 154847313 154848608 - Hmgb1 protein_coding retained_intron MGP_129S1SvImJ_T0075999.1 MGP_129S1SvImJ_G0030399.1 mouse_genomes_project 5 154847561 154851132 - MGP_129S1SvImJ_P0075999 Hmgb1 protein_coding protein_coding MGP_129S1SvImJ_T0076000.1 MGP_129S1SvImJ_G0030399.1 mouse_genomes_project 5 154847984 154850498 - MGP_129S1SvImJ_P0076000 Hmgb1 protein_coding protein_coding MGP_129S1SvImJ_T0076001.1 MGP_129S1SvImJ_G0030399.1 mouse_genomes_project 5 154848228 154851137 - Hmgb1 protein_coding retained_intron MGP_129S1SvImJ_T0076002.1 MGP_129S1SvImJ_G0030399.1 mouse_genomes_project 5 154848475 154851633 - MGP_129S1SvImJ_P0076002 Hmgb1 protein_coding protein_coding MGP_129S1SvImJ_T0076003.1 MGP_129S1SvImJ_G0030399.1 mouse_genomes_project 5 154848533 154851102 - Hmgb1 protein_coding retained_intron MGP_129S1SvImJ_T0074531.1 MGP_129S1SvImJ_G0030110.1 mouse_genomes_project 5 129231040 129232274 + MGP_129S1SvImJ_P0074531 Gm10382 protein_coding protein_coding MGP_129S1SvImJ_T0075683.1 MGP_129S1SvImJ_G0030332.1 mouse_genomes_project 5 148792714 148838319 + MGP_129S1SvImJ_P0075683 Daglb protein_coding protein_coding MGP_129S1SvImJ_T0075684.1 MGP_129S1SvImJ_G0030332.1 mouse_genomes_project 5 148792743 148803784 + Daglb protein_coding retained_intron MGP_129S1SvImJ_T0075685.1 MGP_129S1SvImJ_G0030332.1 mouse_genomes_project 5 148801036 148806208 + Daglb protein_coding retained_intron MGP_129S1SvImJ_T0075686.1 MGP_129S1SvImJ_G0030332.1 mouse_genomes_project 5 148818506 148821838 + Daglb protein_coding retained_intron MGP_129S1SvImJ_T0072184.1 MGP_129S1SvImJ_G0029637.1 mouse_genomes_project 5 75272495 75305924 + MGP_129S1SvImJ_P0072184 Pdgfra protein_coding protein_coding MGP_129S1SvImJ_T0072185.1 MGP_129S1SvImJ_G0029637.1 mouse_genomes_project 5 75272509 75321528 + MGP_129S1SvImJ_P0072185 Pdgfra protein_coding protein_coding MGP_129S1SvImJ_T0072186.1 MGP_129S1SvImJ_G0029637.1 mouse_genomes_project 5 75272555 75297562 + MGP_129S1SvImJ_P0072186 Pdgfra protein_coding non_stop_decay MGP_129S1SvImJ_T0072187.1 MGP_129S1SvImJ_G0029637.1 mouse_genomes_project 5 75273138 75306538 + MGP_129S1SvImJ_P0072187 Pdgfra protein_coding protein_coding MGP_129S1SvImJ_T0072188.1 MGP_129S1SvImJ_G0029637.1 mouse_genomes_project 5 75273789 75285147 + Pdgfra protein_coding retained_intron MGP_129S1SvImJ_T0072189.1 MGP_129S1SvImJ_G0029637.1 mouse_genomes_project 5 75275276 75286176 + MGP_129S1SvImJ_P0072189 Pdgfra protein_coding protein_coding MGP_129S1SvImJ_T0072190.1 MGP_129S1SvImJ_G0029637.1 mouse_genomes_project 5 75277153 75321514 + MGP_129S1SvImJ_P0072190 Pdgfra protein_coding protein_coding MGP_129S1SvImJ_T0072191.1 MGP_129S1SvImJ_G0029637.1 mouse_genomes_project 5 75278087 75288983 + MGP_129S1SvImJ_P0072191 Pdgfra protein_coding protein_coding MGP_129S1SvImJ_T0072192.1 MGP_129S1SvImJ_G0029637.1 mouse_genomes_project 5 75284260 75290360 + MGP_129S1SvImJ_P0072192 Pdgfra protein_coding protein_coding MGP_129S1SvImJ_T0008356.1 MGP_129S1SvImJ_G0006794.1 mouse_genomes_project 5 123223063 123224934 + Gm43269 lincRNA lincRNA MGP_129S1SvImJ_T0004814.1 MGP_129S1SvImJ_G0004155.1 mouse_genomes_project 5 119232691 119233610 + Gm13837 antisense antisense MGP_129S1SvImJ_T0008154.1 MGP_129S1SvImJ_G0006650.1 mouse_genomes_project 5 63611008 63616242 + 5830416I19Rik lincRNA lincRNA MGP_129S1SvImJ_T0071993.1 MGP_129S1SvImJ_G0029602.1 mouse_genomes_project 5 69359448 69379276 - MGP_129S1SvImJ_P0071993 Yipf7 protein_coding protein_coding MGP_129S1SvImJ_T0071994.1 MGP_129S1SvImJ_G0029602.1 mouse_genomes_project 5 69362087 69379217 - MGP_129S1SvImJ_P0071994 Yipf7 protein_coding protein_coding MGP_129S1SvImJ_T0015078.1 MGP_129S1SvImJ_G0013167.1 mouse_genomes_project 5 89075465 89075844 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004674.1 MGP_129S1SvImJ_G0004051.1 mouse_genomes_project 5 29121359 29122926 - Gm15469 antisense antisense MGP_129S1SvImJ_T0070173.1 MGP_129S1SvImJ_G0029291.1 mouse_genomes_project 5 6122743 6172902 - MGP_129S1SvImJ_P0070173 Dmtf1 protein_coding protein_coding MGP_129S1SvImJ_T0070174.1 MGP_129S1SvImJ_G0029291.1 mouse_genomes_project 5 6122803 6172845 - MGP_129S1SvImJ_P0070174 Dmtf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070175.1 MGP_129S1SvImJ_G0029291.1 mouse_genomes_project 5 6122807 6172875 - MGP_129S1SvImJ_P0070175 Dmtf1 protein_coding protein_coding MGP_129S1SvImJ_T0070176.1 MGP_129S1SvImJ_G0029291.1 mouse_genomes_project 5 6122808 6172885 - MGP_129S1SvImJ_P0070176 Dmtf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070177.1 MGP_129S1SvImJ_G0029291.1 mouse_genomes_project 5 6122808 6172878 - MGP_129S1SvImJ_P0070177 Dmtf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070178.1 MGP_129S1SvImJ_G0029291.1 mouse_genomes_project 5 6122812 6158691 - MGP_129S1SvImJ_P0070178 Dmtf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070179.1 MGP_129S1SvImJ_G0029291.1 mouse_genomes_project 5 6122812 6172869 - MGP_129S1SvImJ_P0070179 Dmtf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070180.1 MGP_129S1SvImJ_G0029291.1 mouse_genomes_project 5 6123004 6172797 - MGP_129S1SvImJ_P0070180 Dmtf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070181.1 MGP_129S1SvImJ_G0029291.1 mouse_genomes_project 5 6123727 6124666 - Dmtf1 protein_coding retained_intron MGP_129S1SvImJ_T0070182.1 MGP_129S1SvImJ_G0029291.1 mouse_genomes_project 5 6123941 6172827 - MGP_129S1SvImJ_P0070182 Dmtf1 protein_coding protein_coding MGP_129S1SvImJ_T0070183.1 MGP_129S1SvImJ_G0029291.1 mouse_genomes_project 5 6125388 6130513 - MGP_129S1SvImJ_P0070183 Dmtf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070184.1 MGP_129S1SvImJ_G0029291.1 mouse_genomes_project 5 6125992 6172869 - Dmtf1 protein_coding processed_transcript MGP_129S1SvImJ_T0070185.1 MGP_129S1SvImJ_G0029291.1 mouse_genomes_project 5 6133303 6172863 - Dmtf1 protein_coding retained_intron MGP_129S1SvImJ_T0070186.1 MGP_129S1SvImJ_G0029291.1 mouse_genomes_project 5 6135226 6172842 - MGP_129S1SvImJ_P0070186 Dmtf1 protein_coding protein_coding MGP_129S1SvImJ_T0070187.1 MGP_129S1SvImJ_G0029291.1 mouse_genomes_project 5 6136480 6157588 - MGP_129S1SvImJ_P0070187 Dmtf1 protein_coding protein_coding MGP_129S1SvImJ_T0070188.1 MGP_129S1SvImJ_G0029291.1 mouse_genomes_project 5 6145644 6172860 - Dmtf1 protein_coding retained_intron MGP_129S1SvImJ_T0070189.1 MGP_129S1SvImJ_G0029291.1 mouse_genomes_project 5 6151902 6172875 - Dmtf1 protein_coding retained_intron MGP_129S1SvImJ_T0070190.1 MGP_129S1SvImJ_G0029291.1 mouse_genomes_project 5 6155973 6158481 - MGP_129S1SvImJ_P0070190 Dmtf1 protein_coding protein_coding MGP_129S1SvImJ_T0004831.1 MGP_129S1SvImJ_G0004164.1 mouse_genomes_project 5 123836186 123837248 - Gm15690 antisense antisense MGP_129S1SvImJ_T0098955.1 MGP_129S1SvImJ_G0037033.1 mouse_genomes_project 5 46789799 46791939 + Gm20475 sense_intronic sense_intronic MGP_129S1SvImJ_T0001876.1 MGP_129S1SvImJ_G0001790.1 mouse_genomes_project 5 135945469 135946602 - TEC TEC MGP_129S1SvImJ_T0072285.1 MGP_129S1SvImJ_G0029652.1 mouse_genomes_project 5 77220821 77226246 + MGP_129S1SvImJ_P0072285 Arl9 protein_coding protein_coding MGP_129S1SvImJ_T0072286.1 MGP_129S1SvImJ_G0029652.1 mouse_genomes_project 5 77223236 77227374 + MGP_129S1SvImJ_P0072286 Arl9 protein_coding protein_coding MGP_129S1SvImJ_T0008122.1 MGP_129S1SvImJ_G0006622.1 mouse_genomes_project 5 37919359 38073020 - 4930513D17Rik lincRNA lincRNA MGP_129S1SvImJ_T0008123.1 MGP_129S1SvImJ_G0006622.1 mouse_genomes_project 5 37920174 38073063 - 4930513D17Rik lincRNA lincRNA MGP_129S1SvImJ_T0008124.1 MGP_129S1SvImJ_G0006622.1 mouse_genomes_project 5 37936875 38073018 - 4930513D17Rik lincRNA lincRNA MGP_129S1SvImJ_T0011612.1 MGP_129S1SvImJ_G0009728.1 mouse_genomes_project 5 29931619 29931921 + Gm24436 misc_RNA misc_RNA MGP_129S1SvImJ_T0001515.1 MGP_129S1SvImJ_G0001434.1 mouse_genomes_project 5 29989621 29990316 + TEC TEC MGP_129S1SvImJ_T0070168.1 MGP_129S1SvImJ_G0029289.1 mouse_genomes_project 5 5957955 5989943 - MGP_129S1SvImJ_P0070168 Crot protein_coding protein_coding MGP_129S1SvImJ_T0070169.1 MGP_129S1SvImJ_G0029289.1 mouse_genomes_project 5 5966199 5974709 - Crot protein_coding processed_transcript MGP_129S1SvImJ_T0070170.1 MGP_129S1SvImJ_G0029289.1 mouse_genomes_project 5 5978745 5989661 - Crot protein_coding retained_intron MGP_129S1SvImJ_T0001625.1 MGP_129S1SvImJ_G0001542.1 mouse_genomes_project 5 57015716 57018278 + TEC TEC MGP_129S1SvImJ_T0070908.1 MGP_129S1SvImJ_G0029425.1 mouse_genomes_project 5 29466785 29483834 + MGP_129S1SvImJ_P0070908 protein_coding protein_coding MGP_129S1SvImJ_T0070909.1 MGP_129S1SvImJ_G0029425.1 mouse_genomes_project 5 29466789 29498931 + MGP_129S1SvImJ_P0070909 protein_coding protein_coding MGP_129S1SvImJ_T0070910.1 MGP_129S1SvImJ_G0029425.1 mouse_genomes_project 5 29466804 29490633 + MGP_129S1SvImJ_P0070910 protein_coding protein_coding MGP_129S1SvImJ_T0070911.1 MGP_129S1SvImJ_G0029425.1 mouse_genomes_project 5 29466870 29498926 + MGP_129S1SvImJ_P0070911 protein_coding protein_coding MGP_129S1SvImJ_T0070912.1 MGP_129S1SvImJ_G0029425.1 mouse_genomes_project 5 29481567 29490020 + MGP_129S1SvImJ_P0070912 protein_coding protein_coding MGP_129S1SvImJ_T0071735.1 MGP_129S1SvImJ_G0029560.1 mouse_genomes_project 5 62125576 62135504 - Arap2 protein_coding retained_intron MGP_129S1SvImJ_T0071736.1 MGP_129S1SvImJ_G0029560.1 mouse_genomes_project 5 62125577 62283760 - MGP_129S1SvImJ_P0071736 Arap2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0071737.1 MGP_129S1SvImJ_G0029560.1 mouse_genomes_project 5 62163949 62169585 - Arap2 protein_coding retained_intron MGP_129S1SvImJ_T0071738.1 MGP_129S1SvImJ_G0029560.1 mouse_genomes_project 5 62172880 62176915 - Arap2 protein_coding retained_intron MGP_129S1SvImJ_T0071739.1 MGP_129S1SvImJ_G0029560.1 mouse_genomes_project 5 62209349 62215704 - Arap2 protein_coding retained_intron MGP_129S1SvImJ_T0071740.1 MGP_129S1SvImJ_G0029560.1 mouse_genomes_project 5 62240206 62265839 - Arap2 protein_coding processed_transcript MGP_129S1SvImJ_T0073910.1 MGP_129S1SvImJ_G0030010.1 mouse_genomes_project 5 124013279 124019179 - MGP_129S1SvImJ_P0073910 Cfap73 protein_coding protein_coding MGP_129S1SvImJ_T0075124.1 MGP_129S1SvImJ_G0030218.1 mouse_genomes_project 5 141871759 141887454 - MGP_129S1SvImJ_P0075124 Muc3 protein_coding protein_coding MGP_129S1SvImJ_T0075125.1 MGP_129S1SvImJ_G0030218.1 mouse_genomes_project 5 141871798 141875965 - Muc3 protein_coding processed_transcript MGP_129S1SvImJ_T0070709.1 MGP_129S1SvImJ_G0029397.1 mouse_genomes_project 5 28823523 28834691 + MGP_129S1SvImJ_P0070709 Tmem214 protein_coding protein_coding MGP_129S1SvImJ_T0070710.1 MGP_129S1SvImJ_G0029397.1 mouse_genomes_project 5 28825142 28832556 + MGP_129S1SvImJ_P0070710 Tmem214 protein_coding protein_coding MGP_129S1SvImJ_T0070711.1 MGP_129S1SvImJ_G0029397.1 mouse_genomes_project 5 28825144 28833876 + Tmem214 protein_coding retained_intron MGP_129S1SvImJ_T0070712.1 MGP_129S1SvImJ_G0029397.1 mouse_genomes_project 5 28825146 28832980 + Tmem214 protein_coding retained_intron MGP_129S1SvImJ_T0070713.1 MGP_129S1SvImJ_G0029397.1 mouse_genomes_project 5 28825875 28826997 + Tmem214 protein_coding retained_intron MGP_129S1SvImJ_T0070714.1 MGP_129S1SvImJ_G0029397.1 mouse_genomes_project 5 28827284 28829106 + Tmem214 protein_coding processed_transcript MGP_129S1SvImJ_T0070715.1 MGP_129S1SvImJ_G0029397.1 mouse_genomes_project 5 28827329 28832975 + Tmem214 protein_coding retained_intron MGP_129S1SvImJ_T0004699.1 MGP_129S1SvImJ_G0004071.1 mouse_genomes_project 5 42543275 42543946 - Gm16015 antisense antisense MGP_129S1SvImJ_T0073782.1 MGP_129S1SvImJ_G0029983.1 mouse_genomes_project 5 120147785 120173518 - MGP_129S1SvImJ_P0073782 Suds3 protein_coding protein_coding MGP_129S1SvImJ_T0073783.1 MGP_129S1SvImJ_G0029983.1 mouse_genomes_project 5 120147790 120160574 - Suds3 protein_coding retained_intron MGP_129S1SvImJ_T0073784.1 MGP_129S1SvImJ_G0029983.1 mouse_genomes_project 5 120148542 120173633 - MGP_129S1SvImJ_P0073784 Suds3 protein_coding protein_coding MGP_129S1SvImJ_T0073785.1 MGP_129S1SvImJ_G0029983.1 mouse_genomes_project 5 120151063 120154914 - Suds3 protein_coding retained_intron MGP_129S1SvImJ_T0073786.1 MGP_129S1SvImJ_G0029983.1 mouse_genomes_project 5 120161460 120171071 - Suds3 protein_coding retained_intron MGP_129S1SvImJ_T0073787.1 MGP_129S1SvImJ_G0029983.1 mouse_genomes_project 5 120161466 120166024 - Suds3 protein_coding retained_intron MGP_129S1SvImJ_T0073201.1 MGP_129S1SvImJ_G0029869.1 mouse_genomes_project 5 111261069 111271762 - MGP_129S1SvImJ_P0073201 Vmn2r11 protein_coding protein_coding MGP_129S1SvImJ_T0074224.1 MGP_129S1SvImJ_G0030062.1 mouse_genomes_project 5 126715346 126726345 - MGP_129S1SvImJ_P0074224 Morn3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074225.1 MGP_129S1SvImJ_G0030062.1 mouse_genomes_project 5 126715366 126717237 - MGP_129S1SvImJ_P0074225 Morn3 protein_coding protein_coding MGP_129S1SvImJ_T0074226.1 MGP_129S1SvImJ_G0030062.1 mouse_genomes_project 5 126715439 126717245 - MGP_129S1SvImJ_P0074226 Morn3 protein_coding protein_coding MGP_129S1SvImJ_T0074227.1 MGP_129S1SvImJ_G0030062.1 mouse_genomes_project 5 126716815 126726104 - MGP_129S1SvImJ_P0074227 Morn3 protein_coding protein_coding MGP_129S1SvImJ_T0074228.1 MGP_129S1SvImJ_G0030062.1 mouse_genomes_project 5 126716837 126726334 - MGP_129S1SvImJ_P0074228 Morn3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074133.1 MGP_129S1SvImJ_G0030052.1 mouse_genomes_project 5 126052332 126076598 + MGP_129S1SvImJ_P0074133 Anapc7 protein_coding protein_coding MGP_129S1SvImJ_T0074134.1 MGP_129S1SvImJ_G0030052.1 mouse_genomes_project 5 126053083 126076598 + MGP_129S1SvImJ_P0074134 Anapc7 protein_coding protein_coding MGP_129S1SvImJ_T0074135.1 MGP_129S1SvImJ_G0030052.1 mouse_genomes_project 5 126053120 126075120 + MGP_129S1SvImJ_P0074135 Anapc7 protein_coding protein_coding MGP_129S1SvImJ_T0074136.1 MGP_129S1SvImJ_G0030052.1 mouse_genomes_project 5 126071059 126072171 + Anapc7 protein_coding retained_intron MGP_129S1SvImJ_T0074137.1 MGP_129S1SvImJ_G0030052.1 mouse_genomes_project 5 126071824 126073489 + Anapc7 protein_coding retained_intron MGP_129S1SvImJ_T0074138.1 MGP_129S1SvImJ_G0030052.1 mouse_genomes_project 5 126073060 126073468 + MGP_129S1SvImJ_P0074138 Anapc7 protein_coding protein_coding MGP_129S1SvImJ_T0001571.1 MGP_129S1SvImJ_G0001489.1 mouse_genomes_project 5 45518756 45520610 + TEC TEC MGP_129S1SvImJ_T0015065.1 MGP_129S1SvImJ_G0013154.1 mouse_genomes_project 5 81457644 81458519 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075478.1 MGP_129S1SvImJ_G0030286.1 mouse_genomes_project 5 144455776 144470099 - MGP_129S1SvImJ_P0075478 Zfand2a protein_coding protein_coding MGP_129S1SvImJ_T0075479.1 MGP_129S1SvImJ_G0030286.1 mouse_genomes_project 5 144455781 144470067 - MGP_129S1SvImJ_P0075479 Zfand2a protein_coding protein_coding MGP_129S1SvImJ_T0075480.1 MGP_129S1SvImJ_G0030286.1 mouse_genomes_project 5 144459483 144463508 - Zfand2a protein_coding processed_transcript MGP_129S1SvImJ_T0075481.1 MGP_129S1SvImJ_G0030286.1 mouse_genomes_project 5 144463046 144470014 - MGP_129S1SvImJ_P0075481 Zfand2a protein_coding protein_coding MGP_129S1SvImJ_T0075482.1 MGP_129S1SvImJ_G0030286.1 mouse_genomes_project 5 144463641 144469978 - Zfand2a protein_coding processed_transcript MGP_129S1SvImJ_T0074707.1 MGP_129S1SvImJ_G0030147.1 mouse_genomes_project 5 134522034 134530738 - A330070K13Rik protein_coding antisense MGP_129S1SvImJ_T0074708.1 MGP_129S1SvImJ_G0030147.1 mouse_genomes_project 5 134522107 134530739 - MGP_129S1SvImJ_P0074708 A330070K13Rik protein_coding protein_coding MGP_129S1SvImJ_T0074865.1 MGP_129S1SvImJ_G0030170.1 mouse_genomes_project 5 139502725 139548238 + MGP_129S1SvImJ_P0074865 Stx1a protein_coding protein_coding MGP_129S1SvImJ_T0074866.1 MGP_129S1SvImJ_G0030170.1 mouse_genomes_project 5 139502750 139541134 + MGP_129S1SvImJ_P0074866 Stx1a protein_coding protein_coding MGP_129S1SvImJ_T0074867.1 MGP_129S1SvImJ_G0030170.1 mouse_genomes_project 5 139502803 139548238 + MGP_129S1SvImJ_P0074867 Stx1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074868.1 MGP_129S1SvImJ_G0030170.1 mouse_genomes_project 5 139532004 139544305 + Stx1a protein_coding processed_transcript MGP_129S1SvImJ_T0074869.1 MGP_129S1SvImJ_G0030170.1 mouse_genomes_project 5 139535553 139548237 + Stx1a protein_coding retained_intron MGP_129S1SvImJ_T0074870.1 MGP_129S1SvImJ_G0030170.1 mouse_genomes_project 5 139535759 139544414 + Stx1a protein_coding processed_transcript MGP_129S1SvImJ_T0073613.1 MGP_129S1SvImJ_G0029952.1 mouse_genomes_project 5 117725807 117744957 + MGP_129S1SvImJ_P0073613 Oasl1 protein_coding protein_coding MGP_129S1SvImJ_T0073614.1 MGP_129S1SvImJ_G0029952.1 mouse_genomes_project 5 117725831 117744960 + MGP_129S1SvImJ_P0073614 Oasl1 protein_coding protein_coding MGP_129S1SvImJ_T0073615.1 MGP_129S1SvImJ_G0029952.1 mouse_genomes_project 5 117725989 117741655 + Oasl1 protein_coding processed_transcript MGP_129S1SvImJ_T0073616.1 MGP_129S1SvImJ_G0029952.1 mouse_genomes_project 5 117726002 117741747 + Oasl1 protein_coding processed_transcript MGP_129S1SvImJ_T0073617.1 MGP_129S1SvImJ_G0029952.1 mouse_genomes_project 5 117732425 117737526 + Oasl1 protein_coding retained_intron MGP_129S1SvImJ_T0073618.1 MGP_129S1SvImJ_G0029952.1 mouse_genomes_project 5 117741704 117744732 + Oasl1 protein_coding processed_transcript MGP_129S1SvImJ_T0071412.1 MGP_129S1SvImJ_G0029506.1 mouse_genomes_project 5 36542526 36565240 - MGP_129S1SvImJ_P0071412 Nsg1 protein_coding protein_coding MGP_129S1SvImJ_T0071413.1 MGP_129S1SvImJ_G0029506.1 mouse_genomes_project 5 36543469 36544164 - MGP_129S1SvImJ_P0071413 Nsg1 protein_coding protein_coding MGP_129S1SvImJ_T0071414.1 MGP_129S1SvImJ_G0029506.1 mouse_genomes_project 5 36543590 36564364 - MGP_129S1SvImJ_P0071414 Nsg1 protein_coding protein_coding MGP_129S1SvImJ_T0071415.1 MGP_129S1SvImJ_G0029506.1 mouse_genomes_project 5 36543877 36564738 - MGP_129S1SvImJ_P0071415 Nsg1 protein_coding protein_coding MGP_129S1SvImJ_T0071416.1 MGP_129S1SvImJ_G0029506.1 mouse_genomes_project 5 36550048 36564695 - MGP_129S1SvImJ_P0071416 Nsg1 protein_coding protein_coding MGP_129S1SvImJ_T0071417.1 MGP_129S1SvImJ_G0029506.1 mouse_genomes_project 5 36560665 36564806 - Nsg1 protein_coding retained_intron MGP_129S1SvImJ_T0071418.1 MGP_129S1SvImJ_G0029506.1 mouse_genomes_project 5 36564238 36564738 - MGP_129S1SvImJ_P0071418 Nsg1 protein_coding protein_coding MGP_129S1SvImJ_T0073988.1 MGP_129S1SvImJ_G0030029.1 mouse_genomes_project 5 124990370 124995760 - MGP_129S1SvImJ_P0073988 Adam1b protein_coding protein_coding MGP_129S1SvImJ_T0074652.1 MGP_129S1SvImJ_G0030135.1 mouse_genomes_project 5 134011783 134014525 + MGP_129S1SvImJ_P0074652 Nupr1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074653.1 MGP_129S1SvImJ_G0030135.1 mouse_genomes_project 5 134011785 134018136 + MGP_129S1SvImJ_P0074653 Nupr1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074654.1 MGP_129S1SvImJ_G0030135.1 mouse_genomes_project 5 134011811 134013638 + MGP_129S1SvImJ_P0074654 Nupr1l protein_coding protein_coding MGP_129S1SvImJ_T0074655.1 MGP_129S1SvImJ_G0030135.1 mouse_genomes_project 5 134014213 134014525 + Nupr1l protein_coding processed_transcript MGP_129S1SvImJ_T0008326.1 MGP_129S1SvImJ_G0006770.1 mouse_genomes_project 5 118216969 118218392 - 4930401G09Rik lincRNA lincRNA MGP_129S1SvImJ_T0072030.1 MGP_129S1SvImJ_G0029610.1 mouse_genomes_project 5 72060175 72071805 - MGP_129S1SvImJ_P0072030 Commd8 protein_coding protein_coding MGP_129S1SvImJ_T0072031.1 MGP_129S1SvImJ_G0029610.1 mouse_genomes_project 5 72060785 72071780 - MGP_129S1SvImJ_P0072031 Commd8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072032.1 MGP_129S1SvImJ_G0029610.1 mouse_genomes_project 5 72062611 72064739 - Commd8 protein_coding retained_intron MGP_129S1SvImJ_T0072033.1 MGP_129S1SvImJ_G0029610.1 mouse_genomes_project 5 72063476 72069336 - Commd8 protein_coding processed_transcript MGP_129S1SvImJ_T0072034.1 MGP_129S1SvImJ_G0029610.1 mouse_genomes_project 5 72064562 72071772 - MGP_129S1SvImJ_P0072034 Commd8 protein_coding protein_coding MGP_129S1SvImJ_T0001455.1 MGP_129S1SvImJ_G0001376.1 mouse_genomes_project 5 577914 582843 - TEC TEC MGP_129S1SvImJ_T0008419.1 MGP_129S1SvImJ_G0006831.1 mouse_genomes_project 5 139388469 139389322 + 4933439J24Rik lincRNA lincRNA MGP_129S1SvImJ_T0004781.1 MGP_129S1SvImJ_G0004129.1 mouse_genomes_project 5 107726180 107730396 - Lrrc8dos antisense antisense MGP_129S1SvImJ_T0015028.1 MGP_129S1SvImJ_G0013117.1 mouse_genomes_project 5 63766347 63767302 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073308.1 MGP_129S1SvImJ_G0029892.1 mouse_genomes_project 5 113253645 113259931 - MGP_129S1SvImJ_P0073308 Pus1 protein_coding protein_coding MGP_129S1SvImJ_T0073309.1 MGP_129S1SvImJ_G0029892.1 mouse_genomes_project 5 113253646 113261269 - MGP_129S1SvImJ_P0073309 Pus1 protein_coding protein_coding MGP_129S1SvImJ_T0073310.1 MGP_129S1SvImJ_G0029892.1 mouse_genomes_project 5 113253646 113261269 - MGP_129S1SvImJ_P0073310 Pus1 protein_coding protein_coding MGP_129S1SvImJ_T0073311.1 MGP_129S1SvImJ_G0029892.1 mouse_genomes_project 5 113253646 113261332 - MGP_129S1SvImJ_P0073311 Pus1 protein_coding protein_coding MGP_129S1SvImJ_T0073312.1 MGP_129S1SvImJ_G0029892.1 mouse_genomes_project 5 113253647 113261288 - MGP_129S1SvImJ_P0073312 Pus1 protein_coding protein_coding MGP_129S1SvImJ_T0073313.1 MGP_129S1SvImJ_G0029892.1 mouse_genomes_project 5 113255491 113260819 - MGP_129S1SvImJ_P0073313 Pus1 protein_coding protein_coding MGP_129S1SvImJ_T0073314.1 MGP_129S1SvImJ_G0029892.1 mouse_genomes_project 5 113255500 113261264 - MGP_129S1SvImJ_P0073314 Pus1 protein_coding protein_coding MGP_129S1SvImJ_T0098368.1 MGP_129S1SvImJ_G0036453.1 mouse_genomes_project 5 43660404 43660786 - pseudogene pseudogene MGP_129S1SvImJ_T0074077.1 MGP_129S1SvImJ_G0030042.1 mouse_genomes_project 5 125713191 125754141 - MGP_129S1SvImJ_P0074077 Ccdc63 protein_coding protein_coding MGP_129S1SvImJ_T0074078.1 MGP_129S1SvImJ_G0030042.1 mouse_genomes_project 5 125713221 125718181 - Ccdc63 protein_coding retained_intron MGP_129S1SvImJ_T0074079.1 MGP_129S1SvImJ_G0030042.1 mouse_genomes_project 5 125713236 125750901 - MGP_129S1SvImJ_P0074079 Ccdc63 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074080.1 MGP_129S1SvImJ_G0030042.1 mouse_genomes_project 5 125737668 125745896 - MGP_129S1SvImJ_P0074080 Ccdc63 protein_coding protein_coding MGP_129S1SvImJ_T0074081.1 MGP_129S1SvImJ_G0030042.1 mouse_genomes_project 5 125743790 125745896 - MGP_129S1SvImJ_P0074081 Ccdc63 protein_coding protein_coding MGP_129S1SvImJ_T0074082.1 MGP_129S1SvImJ_G0030042.1 mouse_genomes_project 5 125750525 125755036 - Ccdc63 protein_coding retained_intron MGP_129S1SvImJ_T0074083.1 MGP_129S1SvImJ_G0030042.1 mouse_genomes_project 5 125752197 125756903 - Ccdc63 protein_coding retained_intron MGP_129S1SvImJ_T0070679.1 MGP_129S1SvImJ_G0029393.1 mouse_genomes_project 5 28604422 28614759 + MGP_129S1SvImJ_P0070679 Slc35f6 protein_coding protein_coding MGP_129S1SvImJ_T0070680.1 MGP_129S1SvImJ_G0029393.1 mouse_genomes_project 5 28604434 28609788 + Slc35f6 protein_coding retained_intron MGP_129S1SvImJ_T0070681.1 MGP_129S1SvImJ_G0029393.1 mouse_genomes_project 5 28604448 28614706 + MGP_129S1SvImJ_P0070681 Slc35f6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070682.1 MGP_129S1SvImJ_G0029393.1 mouse_genomes_project 5 28604457 28612615 + Slc35f6 protein_coding retained_intron MGP_129S1SvImJ_T0070683.1 MGP_129S1SvImJ_G0029393.1 mouse_genomes_project 5 28604493 28614706 + MGP_129S1SvImJ_P0070683 Slc35f6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070684.1 MGP_129S1SvImJ_G0029393.1 mouse_genomes_project 5 28604503 28614364 + MGP_129S1SvImJ_P0070684 Slc35f6 protein_coding protein_coding MGP_129S1SvImJ_T0072469.1 MGP_129S1SvImJ_G0029699.1 mouse_genomes_project 5 88981525 88987950 + MGP_129S1SvImJ_P0072469 Smr3a protein_coding protein_coding MGP_129S1SvImJ_T0072470.1 MGP_129S1SvImJ_G0029699.1 mouse_genomes_project 5 88981529 88987953 + MGP_129S1SvImJ_P0072470 Smr3a protein_coding protein_coding MGP_129S1SvImJ_T0001900.1 MGP_129S1SvImJ_G0001813.1 mouse_genomes_project 5 138930794 138932259 - TEC TEC MGP_129S1SvImJ_T0014987.1 MGP_129S1SvImJ_G0013076.1 mouse_genomes_project 5 46757942 46758228 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008187.1 MGP_129S1SvImJ_G0006675.1 mouse_genomes_project 5 75996062 75998665 - Gm19590 lincRNA lincRNA MGP_129S1SvImJ_T0015032.1 MGP_129S1SvImJ_G0013121.1 mouse_genomes_project 5 65915428 65918856 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072513.1 MGP_129S1SvImJ_G0029715.1 mouse_genomes_project 5 90431330 90449450 - MGP_129S1SvImJ_P0072513 Gc protein_coding unknown_likely_coding MGP_129S1SvImJ_T0072514.1 MGP_129S1SvImJ_G0029715.1 mouse_genomes_project 5 90431954 90469159 - MGP_129S1SvImJ_P0072514 Gc protein_coding protein_coding MGP_129S1SvImJ_T0072515.1 MGP_129S1SvImJ_G0029715.1 mouse_genomes_project 5 90436272 90443117 - MGP_129S1SvImJ_P0072515 Gc protein_coding protein_coding MGP_129S1SvImJ_T0014930.1 MGP_129S1SvImJ_G0013019.1 mouse_genomes_project 5 23331513 23331787 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014929.1 MGP_129S1SvImJ_G0013018.1 mouse_genomes_project 5 23242819 23243422 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014967.1 MGP_129S1SvImJ_G0013056.1 mouse_genomes_project 5 33841006 33842793 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072287.1 MGP_129S1SvImJ_G0029653.1 mouse_genomes_project 5 77232790 77278016 + MGP_129S1SvImJ_P0072287 Thegl protein_coding protein_coding MGP_129S1SvImJ_T0072288.1 MGP_129S1SvImJ_G0029653.1 mouse_genomes_project 5 77232790 77278023 + MGP_129S1SvImJ_P0072288 Thegl protein_coding protein_coding MGP_129S1SvImJ_T0072289.1 MGP_129S1SvImJ_G0029653.1 mouse_genomes_project 5 77253561 77264003 + MGP_129S1SvImJ_P0072289 Thegl protein_coding protein_coding MGP_129S1SvImJ_T0004838.1 MGP_129S1SvImJ_G0004171.1 mouse_genomes_project 5 125620822 125625195 + Gm3970 antisense antisense MGP_129S1SvImJ_T0004678.1 MGP_129S1SvImJ_G0004054.1 mouse_genomes_project 5 30404210 30438272 - Gm36840 antisense antisense MGP_129S1SvImJ_T0074198.1 MGP_129S1SvImJ_G0030059.1 mouse_genomes_project 5 126523381 126547458 + MGP_129S1SvImJ_P0074198 Rnf34 protein_coding protein_coding MGP_129S1SvImJ_T0074199.1 MGP_129S1SvImJ_G0030059.1 mouse_genomes_project 5 126523490 126541255 + MGP_129S1SvImJ_P0074199 Rnf34 protein_coding protein_coding MGP_129S1SvImJ_T0071640.1 MGP_129S1SvImJ_G0029542.1 mouse_genomes_project 5 50385446 50491070 - MGP_129S1SvImJ_P0071640 Ppargc1a protein_coding protein_coding MGP_129S1SvImJ_T0071641.1 MGP_129S1SvImJ_G0029542.1 mouse_genomes_project 5 50388848 50491159 - MGP_129S1SvImJ_P0071641 Ppargc1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071642.1 MGP_129S1SvImJ_G0029542.1 mouse_genomes_project 5 50389381 50504907 - MGP_129S1SvImJ_P0071642 Ppargc1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071643.1 MGP_129S1SvImJ_G0029542.1 mouse_genomes_project 5 50427905 50504929 - MGP_129S1SvImJ_P0071643 Ppargc1a protein_coding protein_coding MGP_129S1SvImJ_T0015107.1 MGP_129S1SvImJ_G0013196.1 mouse_genomes_project 5 103753226 103753998 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073203.1 MGP_129S1SvImJ_G0029871.1 mouse_genomes_project 5 111505517 111511754 - MGP_129S1SvImJ_P0073203 protein_coding protein_coding MGP_129S1SvImJ_T0001541.1 MGP_129S1SvImJ_G0001459.1 mouse_genomes_project 5 41753211 41757708 - TEC TEC MGP_129S1SvImJ_T0073387.1 MGP_129S1SvImJ_G0029908.1 mouse_genomes_project 5 114999659 115167165 - MGP_129S1SvImJ_P0073387 Sez6l protein_coding protein_coding MGP_129S1SvImJ_T0073388.1 MGP_129S1SvImJ_G0029908.1 mouse_genomes_project 5 114999664 115167272 - MGP_129S1SvImJ_P0073388 Sez6l protein_coding protein_coding MGP_129S1SvImJ_T0073389.1 MGP_129S1SvImJ_G0029908.1 mouse_genomes_project 5 114999673 115167482 - MGP_129S1SvImJ_P0073389 Sez6l protein_coding protein_coding MGP_129S1SvImJ_T0073390.1 MGP_129S1SvImJ_G0029908.1 mouse_genomes_project 5 115002326 115167474 - MGP_129S1SvImJ_P0073390 Sez6l protein_coding protein_coding MGP_129S1SvImJ_T0004858.1 MGP_129S1SvImJ_G0004184.1 mouse_genomes_project 5 128866179 128866709 + Gm42838 antisense antisense MGP_129S1SvImJ_T0072905.1 MGP_129S1SvImJ_G0029800.1 mouse_genomes_project 5 105057228 105180737 + Ptpn13 protein_coding retained_intron MGP_129S1SvImJ_T0072906.1 MGP_129S1SvImJ_G0029800.1 mouse_genomes_project 5 105057276 105167774 + MGP_129S1SvImJ_P0072906 Ptpn13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072907.1 MGP_129S1SvImJ_G0029800.1 mouse_genomes_project 5 105057292 105139868 + Ptpn13 protein_coding retained_intron MGP_129S1SvImJ_T0072908.1 MGP_129S1SvImJ_G0029800.1 mouse_genomes_project 5 105057448 105237899 + MGP_129S1SvImJ_P0072908 Ptpn13 protein_coding protein_coding MGP_129S1SvImJ_T0072909.1 MGP_129S1SvImJ_G0029800.1 mouse_genomes_project 5 105167599 105182642 + Ptpn13 protein_coding retained_intron MGP_129S1SvImJ_T0001595.1 MGP_129S1SvImJ_G0001512.1 mouse_genomes_project 5 47922057 47924954 - TEC TEC MGP_129S1SvImJ_T0014912.1 MGP_129S1SvImJ_G0013001.1 mouse_genomes_project 5 20265070 20266337 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073396.1 MGP_129S1SvImJ_G0029911.1 mouse_genomes_project 5 115528901 115641657 - MGP_129S1SvImJ_P0073396 Adrbk2 protein_coding protein_coding MGP_129S1SvImJ_T0073397.1 MGP_129S1SvImJ_G0029911.1 mouse_genomes_project 5 115531018 115641657 - MGP_129S1SvImJ_P0073397 Adrbk2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073398.1 MGP_129S1SvImJ_G0029911.1 mouse_genomes_project 5 115534523 115542878 - Adrbk2 protein_coding retained_intron MGP_129S1SvImJ_T0073399.1 MGP_129S1SvImJ_G0029911.1 mouse_genomes_project 5 115536244 115641934 - MGP_129S1SvImJ_P0073399 Adrbk2 protein_coding protein_coding MGP_129S1SvImJ_T0073400.1 MGP_129S1SvImJ_G0029911.1 mouse_genomes_project 5 115538561 115544355 - Adrbk2 protein_coding retained_intron MGP_129S1SvImJ_T0073401.1 MGP_129S1SvImJ_G0029911.1 mouse_genomes_project 5 115581559 115641646 - MGP_129S1SvImJ_P0073401 Adrbk2 protein_coding protein_coding MGP_129S1SvImJ_T0069965.1 MGP_129S1SvImJ_G0029258.1 mouse_genomes_project 5 397036 409632 - MGP_129S1SvImJ_P0069965 Rbm48 protein_coding protein_coding MGP_129S1SvImJ_T0069966.1 MGP_129S1SvImJ_G0029258.1 mouse_genomes_project 5 397834 409106 - MGP_129S1SvImJ_P0069966 Rbm48 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069967.1 MGP_129S1SvImJ_G0029258.1 mouse_genomes_project 5 403829 405193 - Rbm48 protein_coding retained_intron MGP_129S1SvImJ_T0069968.1 MGP_129S1SvImJ_G0029258.1 mouse_genomes_project 5 404533 409129 - Rbm48 protein_coding retained_intron MGP_129S1SvImJ_T0069969.1 MGP_129S1SvImJ_G0029258.1 mouse_genomes_project 5 405307 409249 - MGP_129S1SvImJ_P0069969 Rbm48 protein_coding protein_coding MGP_129S1SvImJ_T0075392.1 MGP_129S1SvImJ_G0030271.1 mouse_genomes_project 5 143536561 143557763 + MGP_129S1SvImJ_P0075392 A430033K04Rik protein_coding protein_coding MGP_129S1SvImJ_T0075393.1 MGP_129S1SvImJ_G0030271.1 mouse_genomes_project 5 143536578 143569431 + MGP_129S1SvImJ_P0075393 A430033K04Rik protein_coding protein_coding MGP_129S1SvImJ_T0075394.1 MGP_129S1SvImJ_G0030271.1 mouse_genomes_project 5 143536596 143565813 + MGP_129S1SvImJ_P0075394 A430033K04Rik protein_coding protein_coding MGP_129S1SvImJ_T0001683.1 MGP_129S1SvImJ_G0001599.1 mouse_genomes_project 5 67199925 67202336 + TEC TEC MGP_129S1SvImJ_T0099918.1 MGP_129S1SvImJ_G0037985.1 mouse_genomes_project 5 49155040 49155147 - Gm22618 snRNA snRNA MGP_129S1SvImJ_T0008158.1 MGP_129S1SvImJ_G0006654.1 mouse_genomes_project 5 64045399 64058504 - 1700027F09Rik lincRNA lincRNA MGP_129S1SvImJ_T0001566.1 MGP_129S1SvImJ_G0001484.1 mouse_genomes_project 5 44416526 44418590 + TEC TEC MGP_129S1SvImJ_T0001750.1 MGP_129S1SvImJ_G0001665.1 mouse_genomes_project 5 102310104 102312401 + TEC TEC MGP_129S1SvImJ_T0073945.1 MGP_129S1SvImJ_G0030022.1 mouse_genomes_project 5 124584504 124648648 - MGP_129S1SvImJ_P0073945 Ptpn11 protein_coding protein_coding MGP_129S1SvImJ_T0073946.1 MGP_129S1SvImJ_G0030022.1 mouse_genomes_project 5 124584506 124648618 - Ptpn11 protein_coding retained_intron MGP_129S1SvImJ_T0073947.1 MGP_129S1SvImJ_G0030022.1 mouse_genomes_project 5 124584512 124648580 - MGP_129S1SvImJ_P0073947 Ptpn11 protein_coding protein_coding MGP_129S1SvImJ_T0073948.1 MGP_129S1SvImJ_G0030022.1 mouse_genomes_project 5 124587811 124599111 - Ptpn11 protein_coding processed_transcript MGP_129S1SvImJ_T0004777.1 MGP_129S1SvImJ_G0004127.1 mouse_genomes_project 5 105150934 105171199 - Gm42620 antisense antisense MGP_129S1SvImJ_T0072505.1 MGP_129S1SvImJ_G0029714.1 mouse_genomes_project 5 89900244 90257830 + MGP_129S1SvImJ_P0072505 Slc4a4 protein_coding protein_coding MGP_129S1SvImJ_T0072506.1 MGP_129S1SvImJ_G0029714.1 mouse_genomes_project 5 89900681 89901701 + Slc4a4 protein_coding processed_transcript MGP_129S1SvImJ_T0072507.1 MGP_129S1SvImJ_G0029714.1 mouse_genomes_project 5 89900717 90257085 + MGP_129S1SvImJ_P0072507 Slc4a4 protein_coding protein_coding MGP_129S1SvImJ_T0072508.1 MGP_129S1SvImJ_G0029714.1 mouse_genomes_project 5 89900719 90258012 + MGP_129S1SvImJ_P0072508 Slc4a4 protein_coding protein_coding MGP_129S1SvImJ_T0072509.1 MGP_129S1SvImJ_G0029714.1 mouse_genomes_project 5 89952092 89972270 + MGP_129S1SvImJ_P0072509 Slc4a4 protein_coding protein_coding MGP_129S1SvImJ_T0072510.1 MGP_129S1SvImJ_G0029714.1 mouse_genomes_project 5 90043901 90257079 + MGP_129S1SvImJ_P0072510 Slc4a4 protein_coding protein_coding MGP_129S1SvImJ_T0072511.1 MGP_129S1SvImJ_G0029714.1 mouse_genomes_project 5 90044012 90058770 + MGP_129S1SvImJ_P0072511 Slc4a4 protein_coding protein_coding MGP_129S1SvImJ_T0072512.1 MGP_129S1SvImJ_G0029714.1 mouse_genomes_project 5 90044027 90136538 + MGP_129S1SvImJ_P0072512 Slc4a4 protein_coding protein_coding MGP_129S1SvImJ_T0004785.1 MGP_129S1SvImJ_G0004133.1 mouse_genomes_project 5 110899944 110904245 + 1700047L14Rik antisense antisense MGP_129S1SvImJ_T0073955.1 MGP_129S1SvImJ_G0030024.1 mouse_genomes_project 5 124680627 124843772 + MGP_129S1SvImJ_P0073955 Gm15800 protein_coding protein_coding MGP_129S1SvImJ_T0073956.1 MGP_129S1SvImJ_G0030024.1 mouse_genomes_project 5 124756969 124776505 + MGP_129S1SvImJ_P0073956 Gm15800 protein_coding protein_coding MGP_129S1SvImJ_T0073957.1 MGP_129S1SvImJ_G0030024.1 mouse_genomes_project 5 124757572 124777088 + Gm15800 protein_coding retained_intron MGP_129S1SvImJ_T0073958.1 MGP_129S1SvImJ_G0030024.1 mouse_genomes_project 5 124761989 124771503 + MGP_129S1SvImJ_P0073958 Gm15800 protein_coding protein_coding MGP_129S1SvImJ_T0073959.1 MGP_129S1SvImJ_G0030024.1 mouse_genomes_project 5 124778843 124797944 + MGP_129S1SvImJ_P0073959 Gm15800 protein_coding protein_coding MGP_129S1SvImJ_T0073960.1 MGP_129S1SvImJ_G0030024.1 mouse_genomes_project 5 124788868 124791770 + Gm15800 protein_coding processed_transcript MGP_129S1SvImJ_T0073961.1 MGP_129S1SvImJ_G0030024.1 mouse_genomes_project 5 124793143 124795900 + Gm15800 protein_coding processed_transcript MGP_129S1SvImJ_T0099941.1 MGP_129S1SvImJ_G0038008.1 mouse_genomes_project 5 87786914 87787020 - Gm24121 snRNA snRNA MGP_129S1SvImJ_T0102583.1 MGP_129S1SvImJ_G0040416.1 mouse_genomes_project 5 148451455 148452394 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0011633.1 MGP_129S1SvImJ_G0009749.1 mouse_genomes_project 5 138575838 138576126 + Gm24139 misc_RNA misc_RNA MGP_129S1SvImJ_T0014958.1 MGP_129S1SvImJ_G0013047.1 mouse_genomes_project 5 31293403 31293863 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001778.1 MGP_129S1SvImJ_G0001693.1 mouse_genomes_project 5 113647316 113649692 + TEC TEC MGP_129S1SvImJ_T0101225.1 MGP_129S1SvImJ_G0039292.1 mouse_genomes_project 5 156658188 156658307 - Gm26013 snoRNA snoRNA MGP_129S1SvImJ_T0072595.1 MGP_129S1SvImJ_G0029740.1 mouse_genomes_project 5 93120112 93139167 + Gm1045 protein_coding retained_intron MGP_129S1SvImJ_T0072596.1 MGP_129S1SvImJ_G0029740.1 mouse_genomes_project 5 93120112 93144194 + MGP_129S1SvImJ_P0072596 Gm1045 protein_coding protein_coding MGP_129S1SvImJ_T0008119.1 MGP_129S1SvImJ_G0006619.1 mouse_genomes_project 5 37704952 37758366 - Gm43453 lincRNA lincRNA MGP_129S1SvImJ_T0076017.1 MGP_129S1SvImJ_G0030403.1 mouse_genomes_project 5 155266924 155297781 + MGP_129S1SvImJ_P0076017 Tex26 protein_coding protein_coding MGP_129S1SvImJ_T0076018.1 MGP_129S1SvImJ_G0030403.1 mouse_genomes_project 5 155266946 155268266 + Tex26 protein_coding processed_transcript MGP_129S1SvImJ_T0076019.1 MGP_129S1SvImJ_G0030403.1 mouse_genomes_project 5 155266970 155297781 + MGP_129S1SvImJ_P0076019 Tex26 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076020.1 MGP_129S1SvImJ_G0030403.1 mouse_genomes_project 5 155266979 155297693 + MGP_129S1SvImJ_P0076020 Tex26 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076021.1 MGP_129S1SvImJ_G0030403.1 mouse_genomes_project 5 155266983 155297693 + MGP_129S1SvImJ_P0076021 Tex26 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076022.1 MGP_129S1SvImJ_G0030403.1 mouse_genomes_project 5 155266991 155297599 + MGP_129S1SvImJ_P0076022 Tex26 protein_coding protein_coding MGP_129S1SvImJ_T0015238.1 MGP_129S1SvImJ_G0013327.1 mouse_genomes_project 5 153910707 153912295 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075519.1 MGP_129S1SvImJ_G0030297.1 mouse_genomes_project 5 145387608 145391835 - MGP_129S1SvImJ_P0075519 Mrm2 protein_coding protein_coding MGP_129S1SvImJ_T0011631.1 MGP_129S1SvImJ_G0009747.1 mouse_genomes_project 5 128056053 128056317 + Gm23171 misc_RNA misc_RNA MGP_129S1SvImJ_T0014874.1 MGP_129S1SvImJ_G0012963.1 mouse_genomes_project 5 5963870 5964065 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008263.1 MGP_129S1SvImJ_G0006733.1 mouse_genomes_project 5 108301186 108313994 + Gm42914 lincRNA lincRNA MGP_129S1SvImJ_T0014898.1 MGP_129S1SvImJ_G0012987.1 mouse_genomes_project 5 18325196 18325567 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070399.1 MGP_129S1SvImJ_G0029334.1 mouse_genomes_project 5 21610894 21620787 - Fam126a protein_coding processed_transcript MGP_129S1SvImJ_T0070400.1 MGP_129S1SvImJ_G0029334.1 mouse_genomes_project 5 21610895 21738722 - MGP_129S1SvImJ_P0070400 Fam126a protein_coding protein_coding MGP_129S1SvImJ_T0070401.1 MGP_129S1SvImJ_G0029334.1 mouse_genomes_project 5 21661272 21705879 - MGP_129S1SvImJ_P0070401 Fam126a protein_coding protein_coding MGP_129S1SvImJ_T0070402.1 MGP_129S1SvImJ_G0029334.1 mouse_genomes_project 5 21687142 21690298 - Fam126a protein_coding retained_intron MGP_129S1SvImJ_T0070403.1 MGP_129S1SvImJ_G0029334.1 mouse_genomes_project 5 21694102 21738715 - Fam126a protein_coding processed_transcript MGP_129S1SvImJ_T0004750.1 MGP_129S1SvImJ_G0004113.1 mouse_genomes_project 5 92133993 92154815 - Gm42532 antisense antisense MGP_129S1SvImJ_T0001513.1 MGP_129S1SvImJ_G0001432.1 mouse_genomes_project 5 29609621 29610253 + TEC TEC MGP_129S1SvImJ_T0001619.1 MGP_129S1SvImJ_G0001536.1 mouse_genomes_project 5 53006103 53007874 + TEC TEC MGP_129S1SvImJ_T0099955.1 MGP_129S1SvImJ_G0038022.1 mouse_genomes_project 5 113152984 113153091 - Gm22716 snRNA snRNA MGP_129S1SvImJ_T0075794.1 MGP_129S1SvImJ_G0030355.1 mouse_genomes_project 5 150505318 150530526 + MGP_129S1SvImJ_P0075794 Arpc1a protein_coding protein_coding MGP_129S1SvImJ_T0075795.1 MGP_129S1SvImJ_G0030355.1 mouse_genomes_project 5 150505372 150517595 + Arpc1a protein_coding processed_transcript MGP_129S1SvImJ_T0075796.1 MGP_129S1SvImJ_G0030355.1 mouse_genomes_project 5 150505394 150530521 + MGP_129S1SvImJ_P0075796 Arpc1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075797.1 MGP_129S1SvImJ_G0030355.1 mouse_genomes_project 5 150505587 150518640 + MGP_129S1SvImJ_P0075797 Arpc1a protein_coding protein_coding MGP_129S1SvImJ_T0075798.1 MGP_129S1SvImJ_G0030355.1 mouse_genomes_project 5 150517668 150520290 + Arpc1a protein_coding retained_intron MGP_129S1SvImJ_T0075799.1 MGP_129S1SvImJ_G0030355.1 mouse_genomes_project 5 150525988 150530357 + Arpc1a protein_coding retained_intron MGP_129S1SvImJ_T0014977.1 MGP_129S1SvImJ_G0013066.1 mouse_genomes_project 5 40443383 40444275 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0074706.1 MGP_129S1SvImJ_G0030146.1 mouse_genomes_project 5 134512706 135036993 + MGP_129S1SvImJ_P0074706 Caln1 protein_coding protein_coding MGP_129S1SvImJ_T0074709.1 MGP_129S1SvImJ_G0030146.1 mouse_genomes_project 5 134530804 134669896 + MGP_129S1SvImJ_P0074709 Caln1 protein_coding protein_coding MGP_129S1SvImJ_T0074710.1 MGP_129S1SvImJ_G0030146.1 mouse_genomes_project 5 134598188 134795778 + MGP_129S1SvImJ_P0074710 Caln1 protein_coding protein_coding MGP_129S1SvImJ_T0074711.1 MGP_129S1SvImJ_G0030146.1 mouse_genomes_project 5 134598745 135037455 + MGP_129S1SvImJ_P0074711 Caln1 protein_coding protein_coding MGP_129S1SvImJ_T0074712.1 MGP_129S1SvImJ_G0030146.1 mouse_genomes_project 5 134599540 135045705 + MGP_129S1SvImJ_P0074712 Caln1 protein_coding protein_coding MGP_129S1SvImJ_T0098760.1 MGP_129S1SvImJ_G0036845.1 mouse_genomes_project 5 139551125 139551254 - Gm25492 scaRNA scaRNA MGP_129S1SvImJ_T0001836.1 MGP_129S1SvImJ_G0001751.1 mouse_genomes_project 5 126715577 126718354 + TEC TEC MGP_129S1SvImJ_T0008164.1 MGP_129S1SvImJ_G0006657.1 mouse_genomes_project 5 64225937 64227892 - Gm42564 lincRNA lincRNA MGP_129S1SvImJ_T0075738.1 MGP_129S1SvImJ_G0030343.1 mouse_genomes_project 5 149295417 149325866 - MGP_129S1SvImJ_P0075738 Ccz1 protein_coding protein_coding MGP_129S1SvImJ_T0075739.1 MGP_129S1SvImJ_G0030343.1 mouse_genomes_project 5 149299012 149300122 - Ccz1 protein_coding processed_transcript MGP_129S1SvImJ_T0075740.1 MGP_129S1SvImJ_G0030343.1 mouse_genomes_project 5 149300015 149311709 - Ccz1 protein_coding retained_intron MGP_129S1SvImJ_T0075741.1 MGP_129S1SvImJ_G0030343.1 mouse_genomes_project 5 149318500 149325890 - Ccz1 protein_coding retained_intron MGP_129S1SvImJ_T0075742.1 MGP_129S1SvImJ_G0030343.1 mouse_genomes_project 5 149322461 149325890 - Ccz1 protein_coding retained_intron MGP_129S1SvImJ_T0001921.1 MGP_129S1SvImJ_G0001834.1 mouse_genomes_project 5 149132891 149136152 + TEC TEC MGP_129S1SvImJ_T0011632.1 MGP_129S1SvImJ_G0009748.1 mouse_genomes_project 5 137096673 137096952 + Gm25722 misc_RNA misc_RNA MGP_129S1SvImJ_T0074965.1 MGP_129S1SvImJ_G0030189.1 mouse_genomes_project 5 140330087 140362977 - MGP_129S1SvImJ_P0074965 Styxl1 protein_coding protein_coding MGP_129S1SvImJ_T0074966.1 MGP_129S1SvImJ_G0030189.1 mouse_genomes_project 5 140330117 140355045 - MGP_129S1SvImJ_P0074966 Styxl1 protein_coding protein_coding MGP_129S1SvImJ_T0074967.1 MGP_129S1SvImJ_G0030189.1 mouse_genomes_project 5 140341749 140363055 - MGP_129S1SvImJ_P0074967 Styxl1 protein_coding protein_coding MGP_129S1SvImJ_T0004844.1 MGP_129S1SvImJ_G0004176.1 mouse_genomes_project 5 127014840 127034815 - Gm15857 antisense antisense MGP_129S1SvImJ_T0001577.1 MGP_129S1SvImJ_G0001495.1 mouse_genomes_project 5 47340840 47343362 - TEC TEC MGP_129S1SvImJ_T0074812.1 MGP_129S1SvImJ_G0030158.1 mouse_genomes_project 5 138970270 138972296 - MGP_129S1SvImJ_P0074812 Syna protein_coding protein_coding MGP_129S1SvImJ_T0015142.1 MGP_129S1SvImJ_G0013231.1 mouse_genomes_project 5 111770872 111771456 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0071113.1 MGP_129S1SvImJ_G0029457.1 mouse_genomes_project 5 32198528 32208461 + MGP_129S1SvImJ_P0071113 Nat8l protein_coding protein_coding MGP_129S1SvImJ_T0071114.1 MGP_129S1SvImJ_G0029457.1 mouse_genomes_project 5 32202307 32203388 + Nat8l protein_coding processed_transcript MGP_129S1SvImJ_T0075087.1 MGP_129S1SvImJ_G0030209.1 mouse_genomes_project 5 141607144 141611880 + MGP_129S1SvImJ_P0075087 Ift22 protein_coding protein_coding MGP_129S1SvImJ_T0075088.1 MGP_129S1SvImJ_G0030209.1 mouse_genomes_project 5 141607148 141611030 + MGP_129S1SvImJ_P0075088 Ift22 protein_coding protein_coding MGP_129S1SvImJ_T0075089.1 MGP_129S1SvImJ_G0030209.1 mouse_genomes_project 5 141607178 141611881 + MGP_129S1SvImJ_P0075089 Ift22 protein_coding protein_coding MGP_129S1SvImJ_T0075090.1 MGP_129S1SvImJ_G0030209.1 mouse_genomes_project 5 141609791 141610365 + Ift22 protein_coding retained_intron MGP_129S1SvImJ_T0008401.1 MGP_129S1SvImJ_G0006820.1 mouse_genomes_project 5 131532010 131534259 + Gm42980 lincRNA lincRNA MGP_129S1SvImJ_T0008232.1 MGP_129S1SvImJ_G0006713.1 mouse_genomes_project 5 101149351 101173616 - Gm43248 lincRNA lincRNA MGP_129S1SvImJ_T0008233.1 MGP_129S1SvImJ_G0006713.1 mouse_genomes_project 5 101160915 101173154 - Gm43248 lincRNA lincRNA MGP_129S1SvImJ_T0098981.1 MGP_129S1SvImJ_G0037055.1 mouse_genomes_project 5 156707417 156709198 + Gm43807 sense_intronic sense_intronic MGP_129S1SvImJ_T0004855.1 MGP_129S1SvImJ_G0004182.1 mouse_genomes_project 5 128500888 128503970 - 4930404A12Rik antisense antisense MGP_129S1SvImJ_T0004856.1 MGP_129S1SvImJ_G0004182.1 mouse_genomes_project 5 128500889 128503970 - 4930404A12Rik antisense antisense MGP_129S1SvImJ_T0004669.1 MGP_129S1SvImJ_G0004048.1 mouse_genomes_project 5 26361816 26844391 + antisense antisense MGP_129S1SvImJ_T0004670.1 MGP_129S1SvImJ_G0004048.1 mouse_genomes_project 5 26370501 26613805 + antisense antisense MGP_129S1SvImJ_T0001925.1 MGP_129S1SvImJ_G0001838.1 mouse_genomes_project 5 153933861 153934546 + TEC TEC MGP_129S1SvImJ_T0001716.1 MGP_129S1SvImJ_G0001631.1 mouse_genomes_project 5 74443837 74446588 - TEC TEC MGP_129S1SvImJ_T0099897.1 MGP_129S1SvImJ_G0037964.1 mouse_genomes_project 5 4142176 4142327 - Gm24525 snRNA snRNA MGP_129S1SvImJ_T0015185.1 MGP_129S1SvImJ_G0013274.1 mouse_genomes_project 5 140198979 140200981 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001856.1 MGP_129S1SvImJ_G0001770.1 mouse_genomes_project 5 132296338 132299568 - TEC TEC MGP_129S1SvImJ_T0074162.1 MGP_129S1SvImJ_G0030056.1 mouse_genomes_project 5 126352655 126377879 + MGP_129S1SvImJ_P0074162 P2rx4 protein_coding protein_coding MGP_129S1SvImJ_T0074163.1 MGP_129S1SvImJ_G0030056.1 mouse_genomes_project 5 126352680 126356549 + P2rx4 protein_coding retained_intron MGP_129S1SvImJ_T0074164.1 MGP_129S1SvImJ_G0030056.1 mouse_genomes_project 5 126352681 126365469 + P2rx4 protein_coding retained_intron MGP_129S1SvImJ_T0074165.1 MGP_129S1SvImJ_G0030056.1 mouse_genomes_project 5 126352691 126373501 + MGP_129S1SvImJ_P0074165 P2rx4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074166.1 MGP_129S1SvImJ_G0030056.1 mouse_genomes_project 5 126352695 126377185 + MGP_129S1SvImJ_P0074166 P2rx4 protein_coding protein_coding MGP_129S1SvImJ_T0074167.1 MGP_129S1SvImJ_G0030056.1 mouse_genomes_project 5 126352765 126376464 + MGP_129S1SvImJ_P0074167 P2rx4 protein_coding protein_coding MGP_129S1SvImJ_T0074168.1 MGP_129S1SvImJ_G0030056.1 mouse_genomes_project 5 126352765 126376464 + MGP_129S1SvImJ_P0074168 P2rx4 protein_coding protein_coding MGP_129S1SvImJ_T0074169.1 MGP_129S1SvImJ_G0030056.1 mouse_genomes_project 5 126375804 126376726 + P2rx4 protein_coding processed_transcript MGP_129S1SvImJ_T0075423.1 MGP_129S1SvImJ_G0030277.1 mouse_genomes_project 5 144154506 144206696 + MGP_129S1SvImJ_P0075423 Sun1 protein_coding protein_coding MGP_129S1SvImJ_T0075424.1 MGP_129S1SvImJ_G0030277.1 mouse_genomes_project 5 144154540 144183006 + Sun1 protein_coding retained_intron MGP_129S1SvImJ_T0075425.1 MGP_129S1SvImJ_G0030277.1 mouse_genomes_project 5 144154540 144183007 + MGP_129S1SvImJ_P0075425 Sun1 protein_coding protein_coding MGP_129S1SvImJ_T0075426.1 MGP_129S1SvImJ_G0030277.1 mouse_genomes_project 5 144154542 144178406 + MGP_129S1SvImJ_P0075426 Sun1 protein_coding protein_coding MGP_129S1SvImJ_T0075427.1 MGP_129S1SvImJ_G0030277.1 mouse_genomes_project 5 144154544 144181265 + MGP_129S1SvImJ_P0075427 Sun1 protein_coding protein_coding MGP_129S1SvImJ_T0075428.1 MGP_129S1SvImJ_G0030277.1 mouse_genomes_project 5 144154548 144171249 + Sun1 protein_coding retained_intron MGP_129S1SvImJ_T0075429.1 MGP_129S1SvImJ_G0030277.1 mouse_genomes_project 5 144154553 144205448 + MGP_129S1SvImJ_P0075429 Sun1 protein_coding protein_coding MGP_129S1SvImJ_T0075430.1 MGP_129S1SvImJ_G0030277.1 mouse_genomes_project 5 144154558 144181271 + MGP_129S1SvImJ_P0075430 Sun1 protein_coding protein_coding MGP_129S1SvImJ_T0075431.1 MGP_129S1SvImJ_G0030277.1 mouse_genomes_project 5 144167421 144167769 + Sun1 protein_coding processed_transcript MGP_129S1SvImJ_T0075432.1 MGP_129S1SvImJ_G0030277.1 mouse_genomes_project 5 144167453 144180064 + MGP_129S1SvImJ_P0075432 Sun1 protein_coding protein_coding MGP_129S1SvImJ_T0075433.1 MGP_129S1SvImJ_G0030277.1 mouse_genomes_project 5 144167507 144205542 + MGP_129S1SvImJ_P0075433 Sun1 protein_coding protein_coding MGP_129S1SvImJ_T0075434.1 MGP_129S1SvImJ_G0030277.1 mouse_genomes_project 5 144167747 144180028 + MGP_129S1SvImJ_P0075434 Sun1 protein_coding protein_coding MGP_129S1SvImJ_T0075435.1 MGP_129S1SvImJ_G0030277.1 mouse_genomes_project 5 144178344 144185499 + Sun1 protein_coding processed_transcript MGP_129S1SvImJ_T0075436.1 MGP_129S1SvImJ_G0030277.1 mouse_genomes_project 5 144179942 144184606 + MGP_129S1SvImJ_P0075436 Sun1 protein_coding protein_coding MGP_129S1SvImJ_T0075437.1 MGP_129S1SvImJ_G0030277.1 mouse_genomes_project 5 144181409 144190292 + MGP_129S1SvImJ_P0075437 Sun1 protein_coding protein_coding MGP_129S1SvImJ_T0075438.1 MGP_129S1SvImJ_G0030277.1 mouse_genomes_project 5 144185770 144189210 + Sun1 protein_coding retained_intron MGP_129S1SvImJ_T0075439.1 MGP_129S1SvImJ_G0030277.1 mouse_genomes_project 5 144190243 144202266 + MGP_129S1SvImJ_P0075439 Sun1 protein_coding protein_coding MGP_129S1SvImJ_T0075440.1 MGP_129S1SvImJ_G0030277.1 mouse_genomes_project 5 144198252 144205405 + MGP_129S1SvImJ_P0075440 Sun1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0004706.1 MGP_129S1SvImJ_G0004076.1 mouse_genomes_project 5 44136042 44152933 + Gm42413 antisense antisense MGP_129S1SvImJ_T0001740.1 MGP_129S1SvImJ_G0001655.1 mouse_genomes_project 5 98046545 98048691 + TEC TEC MGP_129S1SvImJ_T0015241.1 MGP_129S1SvImJ_G0013330.1 mouse_genomes_project 5 155516166 155516625 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004868.1 MGP_129S1SvImJ_G0004192.1 mouse_genomes_project 5 136217044 136227043 + Gm42439 antisense antisense MGP_129S1SvImJ_T0072406.1 MGP_129S1SvImJ_G0029682.1 mouse_genomes_project 5 88321700 88344564 - MGP_129S1SvImJ_P0072406 protein_coding protein_coding MGP_129S1SvImJ_T0008316.1 MGP_129S1SvImJ_G0006764.1 mouse_genomes_project 5 115278188 115283432 + Gm42865 lincRNA lincRNA MGP_129S1SvImJ_T0004738.1 MGP_129S1SvImJ_G0004103.1 mouse_genomes_project 5 76476810 76477462 + Gm7467 antisense antisense MGP_129S1SvImJ_T0001824.1 MGP_129S1SvImJ_G0001739.1 mouse_genomes_project 5 125098091 125100307 + TEC TEC MGP_129S1SvImJ_T0075858.1 MGP_129S1SvImJ_G0030368.1 mouse_genomes_project 5 151307464 151351559 - MGP_129S1SvImJ_P0075858 protein_coding protein_coding MGP_129S1SvImJ_T0001456.1 MGP_129S1SvImJ_G0001377.1 mouse_genomes_project 5 2604529 2606467 + TEC TEC MGP_129S1SvImJ_T0008437.1 MGP_129S1SvImJ_G0006846.1 mouse_genomes_project 5 148479041 148480014 - Rbakdn lincRNA lincRNA MGP_129S1SvImJ_T0008438.1 MGP_129S1SvImJ_G0006846.1 mouse_genomes_project 5 148479041 148479966 - Rbakdn lincRNA lincRNA MGP_129S1SvImJ_T0073774.1 MGP_129S1SvImJ_G0029980.1 mouse_genomes_project 5 119078115 119263951 - MGP_129S1SvImJ_P0073774 Ccdc60 protein_coding protein_coding MGP_129S1SvImJ_T0073775.1 MGP_129S1SvImJ_G0029980.1 mouse_genomes_project 5 119124650 119263929 - MGP_129S1SvImJ_P0073775 Ccdc60 protein_coding protein_coding MGP_129S1SvImJ_T0098943.1 MGP_129S1SvImJ_G0037021.1 mouse_genomes_project 5 1699352 1702463 - Gm43112 sense_intronic sense_intronic MGP_129S1SvImJ_T0072356.1 MGP_129S1SvImJ_G0029663.1 mouse_genomes_project 5 86830400 86891691 - MGP_129S1SvImJ_P0072356 Cenpc1 protein_coding protein_coding MGP_129S1SvImJ_T0072357.1 MGP_129S1SvImJ_G0029663.1 mouse_genomes_project 5 86869312 86891659 - Cenpc1 protein_coding retained_intron MGP_129S1SvImJ_T0072358.1 MGP_129S1SvImJ_G0029663.1 mouse_genomes_project 5 86869313 86891655 - Cenpc1 protein_coding retained_intron MGP_129S1SvImJ_T0072359.1 MGP_129S1SvImJ_G0029663.1 mouse_genomes_project 5 86880727 86891630 - Cenpc1 protein_coding retained_intron MGP_129S1SvImJ_T0014965.1 MGP_129S1SvImJ_G0013054.1 mouse_genomes_project 5 32523505 32523964 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004766.1 MGP_129S1SvImJ_G0004122.1 mouse_genomes_project 5 101531586 101550073 + Tmem150cos antisense antisense MGP_129S1SvImJ_T0004767.1 MGP_129S1SvImJ_G0004122.1 mouse_genomes_project 5 101546823 101550197 + Tmem150cos antisense antisense MGP_129S1SvImJ_T0075572.1 MGP_129S1SvImJ_G0030308.1 mouse_genomes_project 5 145997108 146135437 - MGP_129S1SvImJ_P0075572 Card11 protein_coding protein_coding MGP_129S1SvImJ_T0075573.1 MGP_129S1SvImJ_G0030308.1 mouse_genomes_project 5 145997110 146006332 - Card11 protein_coding retained_intron MGP_129S1SvImJ_T0075574.1 MGP_129S1SvImJ_G0030308.1 mouse_genomes_project 5 146041669 146135326 - Card11 protein_coding retained_intron MGP_129S1SvImJ_T0008065.1 MGP_129S1SvImJ_G0006587.1 mouse_genomes_project 5 20308518 20316534 - A930003O13Rik lincRNA lincRNA MGP_129S1SvImJ_T0008066.1 MGP_129S1SvImJ_G0006587.1 mouse_genomes_project 5 20308980 20312116 - A930003O13Rik lincRNA lincRNA MGP_129S1SvImJ_T0008067.1 MGP_129S1SvImJ_G0006587.1 mouse_genomes_project 5 20313668 20316554 - A930003O13Rik lincRNA lincRNA MGP_129S1SvImJ_T0001672.1 MGP_129S1SvImJ_G0001588.1 mouse_genomes_project 5 66075829 66077162 - TEC TEC MGP_129S1SvImJ_T0014933.1 MGP_129S1SvImJ_G0013022.1 mouse_genomes_project 5 24430130 24430242 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001601.1 MGP_129S1SvImJ_G0001518.1 mouse_genomes_project 5 48378809 48381922 - TEC TEC MGP_129S1SvImJ_T0075948.1 MGP_129S1SvImJ_G0030391.1 mouse_genomes_project 5 153239321 153417102 - MGP_129S1SvImJ_P0075948 Flt1 protein_coding protein_coding MGP_129S1SvImJ_T0075949.1 MGP_129S1SvImJ_G0030391.1 mouse_genomes_project 5 153285765 153317927 - Flt1 protein_coding processed_transcript MGP_129S1SvImJ_T0075950.1 MGP_129S1SvImJ_G0030391.1 mouse_genomes_project 5 153298252 153298739 - Flt1 protein_coding processed_transcript MGP_129S1SvImJ_T0075951.1 MGP_129S1SvImJ_G0030391.1 mouse_genomes_project 5 153318667 153417079 - MGP_129S1SvImJ_P0075951 Flt1 protein_coding protein_coding MGP_129S1SvImJ_T0075952.1 MGP_129S1SvImJ_G0030391.1 mouse_genomes_project 5 153328327 153330353 - Flt1 protein_coding retained_intron MGP_129S1SvImJ_T0075953.1 MGP_129S1SvImJ_G0030391.1 mouse_genomes_project 5 153337833 153417079 - Flt1 protein_coding processed_transcript MGP_129S1SvImJ_T0070511.1 MGP_129S1SvImJ_G0029355.1 mouse_genomes_project 5 22523717 22524039 - Crygn protein_coding processed_transcript MGP_129S1SvImJ_T0070512.1 MGP_129S1SvImJ_G0029355.1 mouse_genomes_project 5 22523717 22530729 - MGP_129S1SvImJ_P0070512 Crygn protein_coding protein_coding MGP_129S1SvImJ_T0008473.1 MGP_129S1SvImJ_G0006876.1 mouse_genomes_project 5 155053139 155067222 - Gm29264 lincRNA lincRNA MGP_129S1SvImJ_T0098758.1 MGP_129S1SvImJ_G0036843.1 mouse_genomes_project 5 93627627 93627765 + Gm26039 scaRNA scaRNA MGP_129S1SvImJ_T0008421.1 MGP_129S1SvImJ_G0006833.1 mouse_genomes_project 5 141618052 141636280 + 4933404O12Rik lincRNA lincRNA MGP_129S1SvImJ_T0008422.1 MGP_129S1SvImJ_G0006833.1 mouse_genomes_project 5 141618087 141632928 + 4933404O12Rik lincRNA lincRNA MGP_129S1SvImJ_T0008423.1 MGP_129S1SvImJ_G0006833.1 mouse_genomes_project 5 141618258 141632847 + 4933404O12Rik lincRNA lincRNA MGP_129S1SvImJ_T0008424.1 MGP_129S1SvImJ_G0006833.1 mouse_genomes_project 5 141618307 141636286 + 4933404O12Rik lincRNA lincRNA MGP_129S1SvImJ_T0072778.1 MGP_129S1SvImJ_G0029779.1 mouse_genomes_project 5 100686764 101145365 - MGP_129S1SvImJ_P0072778 protein_coding protein_coding MGP_129S1SvImJ_T0072779.1 MGP_129S1SvImJ_G0029779.1 mouse_genomes_project 5 100762103 101145382 - MGP_129S1SvImJ_P0072779 protein_coding protein_coding MGP_129S1SvImJ_T0072780.1 MGP_129S1SvImJ_G0029779.1 mouse_genomes_project 5 100957240 101145385 - protein_coding retained_intron MGP_129S1SvImJ_T0072781.1 MGP_129S1SvImJ_G0029779.1 mouse_genomes_project 5 101091283 101145141 - protein_coding processed_transcript MGP_129S1SvImJ_T0072782.1 MGP_129S1SvImJ_G0029779.1 mouse_genomes_project 5 101139785 101145376 - MGP_129S1SvImJ_P0072782 protein_coding protein_coding MGP_129S1SvImJ_T0015109.1 MGP_129S1SvImJ_G0013198.1 mouse_genomes_project 5 104011464 104012196 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008458.1 MGP_129S1SvImJ_G0006864.1 mouse_genomes_project 5 154545737 154550500 + 4930505K14Rik lincRNA lincRNA MGP_129S1SvImJ_T0001549.1 MGP_129S1SvImJ_G0001467.1 mouse_genomes_project 5 42583944 42584491 + TEC TEC MGP_129S1SvImJ_T0074106.1 MGP_129S1SvImJ_G0030047.1 mouse_genomes_project 5 125954218 125989553 - MGP_129S1SvImJ_P0074106 Rad9b protein_coding protein_coding MGP_129S1SvImJ_T0074107.1 MGP_129S1SvImJ_G0030047.1 mouse_genomes_project 5 125956508 125986615 - MGP_129S1SvImJ_P0074107 Rad9b protein_coding protein_coding MGP_129S1SvImJ_T0074108.1 MGP_129S1SvImJ_G0030047.1 mouse_genomes_project 5 125956510 125989554 - MGP_129S1SvImJ_P0074108 Rad9b protein_coding protein_coding MGP_129S1SvImJ_T0074109.1 MGP_129S1SvImJ_G0030047.1 mouse_genomes_project 5 125986592 125988106 - MGP_129S1SvImJ_P0074109 Rad9b protein_coding protein_coding MGP_129S1SvImJ_T0074110.1 MGP_129S1SvImJ_G0030047.1 mouse_genomes_project 5 125987815 125989541 - Rad9b protein_coding retained_intron MGP_129S1SvImJ_T0004686.1 MGP_129S1SvImJ_G0004062.1 mouse_genomes_project 5 33868985 33876504 - 4931431C16Rik antisense antisense MGP_129S1SvImJ_T0102568.1 MGP_129S1SvImJ_G0040401.1 mouse_genomes_project 5 88291882 88295649 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015017.1 MGP_129S1SvImJ_G0013106.1 mouse_genomes_project 5 60294150 60294919 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001579.1 MGP_129S1SvImJ_G0001497.1 mouse_genomes_project 5 47514555 47518357 - TEC TEC MGP_129S1SvImJ_T0098755.1 MGP_129S1SvImJ_G0036840.1 mouse_genomes_project 5 1865987 1866114 - Gm22897 scaRNA scaRNA MGP_129S1SvImJ_T0075558.1 MGP_129S1SvImJ_G0030305.1 mouse_genomes_project 5 145820353 145835523 + MGP_129S1SvImJ_P0075558 Brat1 protein_coding protein_coding MGP_129S1SvImJ_T0075559.1 MGP_129S1SvImJ_G0030305.1 mouse_genomes_project 5 145820365 145835474 + MGP_129S1SvImJ_P0075559 Brat1 protein_coding protein_coding MGP_129S1SvImJ_T0075560.1 MGP_129S1SvImJ_G0030305.1 mouse_genomes_project 5 145820365 145835317 + MGP_129S1SvImJ_P0075560 Brat1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075561.1 MGP_129S1SvImJ_G0030305.1 mouse_genomes_project 5 145820392 145832079 + Brat1 protein_coding retained_intron MGP_129S1SvImJ_T0075562.1 MGP_129S1SvImJ_G0030305.1 mouse_genomes_project 5 145820394 145831803 + Brat1 protein_coding retained_intron MGP_129S1SvImJ_T0075563.1 MGP_129S1SvImJ_G0030305.1 mouse_genomes_project 5 145820408 145835523 + MGP_129S1SvImJ_P0075563 Brat1 protein_coding protein_coding MGP_129S1SvImJ_T0008420.1 MGP_129S1SvImJ_G0006832.1 mouse_genomes_project 5 140219930 140243445 - Gm43091 lincRNA lincRNA MGP_129S1SvImJ_T0074738.1 MGP_129S1SvImJ_G0030151.1 mouse_genomes_project 5 138453507 138503853 + MGP_129S1SvImJ_P0074738 Gatsl2 protein_coding protein_coding MGP_129S1SvImJ_T0074739.1 MGP_129S1SvImJ_G0030151.1 mouse_genomes_project 5 138453838 138503840 + Gatsl2 protein_coding processed_transcript MGP_129S1SvImJ_T0074740.1 MGP_129S1SvImJ_G0030151.1 mouse_genomes_project 5 138494454 138497041 + Gatsl2 protein_coding retained_intron MGP_129S1SvImJ_T0011618.1 MGP_129S1SvImJ_G0009734.1 mouse_genomes_project 5 101902782 101902856 + Gm27553 misc_RNA misc_RNA MGP_129S1SvImJ_T0075401.1 MGP_129S1SvImJ_G0030273.1 mouse_genomes_project 5 143737089 143739096 + Gm5294 protein_coding unprocessed_pseudogene MGP_129S1SvImJ_T0075402.1 MGP_129S1SvImJ_G0030273.1 mouse_genomes_project 5 143737799 143739339 + MGP_129S1SvImJ_P0075402 Gm5294 protein_coding protein_coding MGP_129S1SvImJ_T0014972.1 MGP_129S1SvImJ_G0013061.1 mouse_genomes_project 5 36991620 36992019 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098962.1 MGP_129S1SvImJ_G0037040.1 mouse_genomes_project 5 118411776 118412496 + Gm13840 sense_intronic sense_intronic MGP_129S1SvImJ_T0015123.1 MGP_129S1SvImJ_G0013212.1 mouse_genomes_project 5 108305130 108305453 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0071746.1 MGP_129S1SvImJ_G0029563.1 mouse_genomes_project 5 63384043 63466460 + MGP_129S1SvImJ_P0071746 0610040J01Rik protein_coding protein_coding MGP_129S1SvImJ_T0071747.1 MGP_129S1SvImJ_G0029563.1 mouse_genomes_project 5 63384200 63465402 + MGP_129S1SvImJ_P0071747 0610040J01Rik protein_coding protein_coding MGP_129S1SvImJ_T0071748.1 MGP_129S1SvImJ_G0029563.1 mouse_genomes_project 5 63443163 63465101 + MGP_129S1SvImJ_P0071748 0610040J01Rik protein_coding protein_coding MGP_129S1SvImJ_T0071749.1 MGP_129S1SvImJ_G0029563.1 mouse_genomes_project 5 63444330 63465364 + MGP_129S1SvImJ_P0071749 0610040J01Rik protein_coding protein_coding MGP_129S1SvImJ_T0102554.1 MGP_129S1SvImJ_G0040387.1 mouse_genomes_project 5 231949 232117 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015070.1 MGP_129S1SvImJ_G0013159.1 mouse_genomes_project 5 86823714 86823925 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008224.1 MGP_129S1SvImJ_G0006708.1 mouse_genomes_project 5 98684004 98945857 + 4930467D21Rik lincRNA lincRNA MGP_129S1SvImJ_T0008225.1 MGP_129S1SvImJ_G0006708.1 mouse_genomes_project 5 98684034 98890845 + 4930467D21Rik lincRNA lincRNA MGP_129S1SvImJ_T0010733.1 MGP_129S1SvImJ_G0008849.1 mouse_genomes_project 5 127773957 127774036 + Mir7032 miRNA miRNA MGP_129S1SvImJ_T0008339.1 MGP_129S1SvImJ_G0006780.1 mouse_genomes_project 5 120385006 120387936 - BC051077 lincRNA lincRNA MGP_129S1SvImJ_T0008441.1 MGP_129S1SvImJ_G0006849.1 mouse_genomes_project 5 148660255 148661046 + Gm43397 lincRNA lincRNA MGP_129S1SvImJ_T0074054.1 MGP_129S1SvImJ_G0030039.1 mouse_genomes_project 5 125425921 125431570 + MGP_129S1SvImJ_P0074054 Fam109a protein_coding protein_coding MGP_129S1SvImJ_T0074055.1 MGP_129S1SvImJ_G0030039.1 mouse_genomes_project 5 125425932 125431537 + MGP_129S1SvImJ_P0074055 Fam109a protein_coding protein_coding MGP_129S1SvImJ_T0074056.1 MGP_129S1SvImJ_G0030039.1 mouse_genomes_project 5 125425942 125429822 + MGP_129S1SvImJ_P0074056 Fam109a protein_coding protein_coding MGP_129S1SvImJ_T0015161.1 MGP_129S1SvImJ_G0013250.1 mouse_genomes_project 5 118385088 118385589 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015193.1 MGP_129S1SvImJ_G0013282.1 mouse_genomes_project 5 142376270 142378279 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0074672.1 MGP_129S1SvImJ_G0030139.1 mouse_genomes_project 5 134138835 134173084 + MGP_129S1SvImJ_P0074672 Crcp protein_coding protein_coding MGP_129S1SvImJ_T0074673.1 MGP_129S1SvImJ_G0030139.1 mouse_genomes_project 5 134138852 134173127 + Crcp protein_coding processed_transcript MGP_129S1SvImJ_T0074674.1 MGP_129S1SvImJ_G0030139.1 mouse_genomes_project 5 134138867 134172945 + Crcp protein_coding processed_transcript MGP_129S1SvImJ_T0074675.1 MGP_129S1SvImJ_G0030139.1 mouse_genomes_project 5 134138924 134173811 + MGP_129S1SvImJ_P0074675 Crcp protein_coding protein_coding MGP_129S1SvImJ_T0074676.1 MGP_129S1SvImJ_G0030139.1 mouse_genomes_project 5 134155221 134173423 + Crcp protein_coding processed_transcript MGP_129S1SvImJ_T0004703.1 MGP_129S1SvImJ_G0004074.1 mouse_genomes_project 5 42868048 42886156 + Gm42984 antisense antisense MGP_129S1SvImJ_T0010690.1 MGP_129S1SvImJ_G0008806.1 mouse_genomes_project 5 29701346 29701456 - Mir3473e miRNA miRNA MGP_129S1SvImJ_T0015069.1 MGP_129S1SvImJ_G0013158.1 mouse_genomes_project 5 85650506 85651173 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008320.1 MGP_129S1SvImJ_G0006768.1 mouse_genomes_project 5 118150553 118169123 + Gm13830 lincRNA lincRNA MGP_129S1SvImJ_T0008321.1 MGP_129S1SvImJ_G0006768.1 mouse_genomes_project 5 118150569 118151732 + Gm13830 lincRNA lincRNA MGP_129S1SvImJ_T0008322.1 MGP_129S1SvImJ_G0006768.1 mouse_genomes_project 5 118150570 118167507 + Gm13830 lincRNA lincRNA MGP_129S1SvImJ_T0008323.1 MGP_129S1SvImJ_G0006768.1 mouse_genomes_project 5 118150580 118151765 + Gm13830 lincRNA lincRNA MGP_129S1SvImJ_T0008324.1 MGP_129S1SvImJ_G0006768.1 mouse_genomes_project 5 118150640 118151170 + Gm13830 lincRNA lincRNA MGP_129S1SvImJ_T0001707.1 MGP_129S1SvImJ_G0001622.1 mouse_genomes_project 5 73265197 73266075 + TEC TEC MGP_129S1SvImJ_T0008391.1 MGP_129S1SvImJ_G0006813.1 mouse_genomes_project 5 130634354 130637321 - Gm43754 lincRNA lincRNA MGP_129S1SvImJ_T0008282.1 MGP_129S1SvImJ_G0006747.1 mouse_genomes_project 5 112837608 112839850 + Gm26711 lincRNA lincRNA MGP_129S1SvImJ_T0071686.1 MGP_129S1SvImJ_G0029551.1 mouse_genomes_project 5 52051112 52074436 + MGP_129S1SvImJ_P0071686 Slc34a2 protein_coding protein_coding MGP_129S1SvImJ_T0071687.1 MGP_129S1SvImJ_G0029551.1 mouse_genomes_project 5 52062386 52085769 + MGP_129S1SvImJ_P0071687 Slc34a2 protein_coding protein_coding MGP_129S1SvImJ_T0071688.1 MGP_129S1SvImJ_G0029551.1 mouse_genomes_project 5 52062387 52079307 + Slc34a2 protein_coding retained_intron MGP_129S1SvImJ_T0004876.1 MGP_129S1SvImJ_G0004198.1 mouse_genomes_project 5 139489149 139490289 - Abhd11os antisense antisense MGP_129S1SvImJ_T0004877.1 MGP_129S1SvImJ_G0004198.1 mouse_genomes_project 5 139489157 139490190 - Abhd11os antisense antisense MGP_129S1SvImJ_T0015023.1 MGP_129S1SvImJ_G0013112.1 mouse_genomes_project 5 63561913 63562396 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072343.1 MGP_129S1SvImJ_G0029661.1 mouse_genomes_project 5 83956707 84027121 - MGP_129S1SvImJ_P0072343 Tecrl protein_coding protein_coding MGP_129S1SvImJ_T0072344.1 MGP_129S1SvImJ_G0029661.1 mouse_genomes_project 5 83969483 84026882 - MGP_129S1SvImJ_P0072344 Tecrl protein_coding protein_coding MGP_129S1SvImJ_T0008454.1 MGP_129S1SvImJ_G0006860.1 mouse_genomes_project 5 153443268 153446934 + Gm43156 lincRNA lincRNA MGP_129S1SvImJ_T0015115.1 MGP_129S1SvImJ_G0013204.1 mouse_genomes_project 5 106410222 106470576 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001757.1 MGP_129S1SvImJ_G0001672.1 mouse_genomes_project 5 104599959 104602439 - TEC TEC MGP_129S1SvImJ_T0075348.1 MGP_129S1SvImJ_G0030262.1 mouse_genomes_project 5 143024890 143101687 + MGP_129S1SvImJ_P0075348 protein_coding protein_coding MGP_129S1SvImJ_T0101727.1 MGP_129S1SvImJ_G0039729.1 mouse_genomes_project 5 77820634 77821021 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101728.1 MGP_129S1SvImJ_G0039729.1 mouse_genomes_project 5 77820650 77821205 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0008484.1 MGP_129S1SvImJ_G0006881.1 mouse_genomes_project 5 155781919 155782917 - Gm43452 lincRNA lincRNA MGP_129S1SvImJ_T0072380.1 MGP_129S1SvImJ_G0029671.1 mouse_genomes_project 5 87370765 87474458 - MGP_129S1SvImJ_P0072380 Tmprss11f protein_coding protein_coding MGP_129S1SvImJ_T0072381.1 MGP_129S1SvImJ_G0029671.1 mouse_genomes_project 5 87409090 87474458 - Tmprss11f protein_coding processed_transcript MGP_129S1SvImJ_T0072382.1 MGP_129S1SvImJ_G0029671.1 mouse_genomes_project 5 87442567 87474417 - Tmprss11f protein_coding retained_intron MGP_129S1SvImJ_T0073418.1 MGP_129S1SvImJ_G0029914.1 mouse_genomes_project 5 115718880 115804976 - MGP_129S1SvImJ_P0073418 2900026A02Rik protein_coding protein_coding MGP_129S1SvImJ_T0073419.1 MGP_129S1SvImJ_G0029914.1 mouse_genomes_project 5 115724976 115777120 - MGP_129S1SvImJ_P0073419 2900026A02Rik protein_coding unknown_likely_coding MGP_129S1SvImJ_T0075866.1 MGP_129S1SvImJ_G0030373.1 mouse_genomes_project 5 151490932 151531535 - MGP_129S1SvImJ_P0075866 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075867.1 MGP_129S1SvImJ_G0030373.1 mouse_genomes_project 5 151490934 151531525 - MGP_129S1SvImJ_P0075867 protein_coding protein_coding MGP_129S1SvImJ_T0008451.1 MGP_129S1SvImJ_G0006857.1 mouse_genomes_project 5 152403628 152414148 + Gm43741 lincRNA lincRNA MGP_129S1SvImJ_T0073194.1 MGP_129S1SvImJ_G0029865.1 mouse_genomes_project 5 110868980 110886072 - MGP_129S1SvImJ_P0073194 Rnf212 protein_coding protein_coding MGP_129S1SvImJ_T0073195.1 MGP_129S1SvImJ_G0029865.1 mouse_genomes_project 5 110869004 110887542 - MGP_129S1SvImJ_P0073195 Rnf212 protein_coding protein_coding MGP_129S1SvImJ_T0073196.1 MGP_129S1SvImJ_G0029865.1 mouse_genomes_project 5 110869443 110910284 - MGP_129S1SvImJ_P0073196 Rnf212 protein_coding protein_coding MGP_129S1SvImJ_T0073197.1 MGP_129S1SvImJ_G0029865.1 mouse_genomes_project 5 110871276 110886072 - MGP_129S1SvImJ_P0073197 Rnf212 protein_coding protein_coding MGP_129S1SvImJ_T0074241.1 MGP_129S1SvImJ_G0030065.1 mouse_genomes_project 5 126828782 126836572 + protein_coding retained_intron MGP_129S1SvImJ_T0074242.1 MGP_129S1SvImJ_G0030065.1 mouse_genomes_project 5 126828782 126857584 + MGP_129S1SvImJ_P0074242 protein_coding protein_coding MGP_129S1SvImJ_T0074243.1 MGP_129S1SvImJ_G0030065.1 mouse_genomes_project 5 126828782 126856383 + MGP_129S1SvImJ_P0074243 protein_coding protein_coding MGP_129S1SvImJ_T0074244.1 MGP_129S1SvImJ_G0030065.1 mouse_genomes_project 5 126829550 126856383 + MGP_129S1SvImJ_P0074244 protein_coding protein_coding MGP_129S1SvImJ_T0074245.1 MGP_129S1SvImJ_G0030065.1 mouse_genomes_project 5 126850806 126853111 + protein_coding retained_intron MGP_129S1SvImJ_T0074246.1 MGP_129S1SvImJ_G0030065.1 mouse_genomes_project 5 126851478 126852205 + MGP_129S1SvImJ_P0074246 protein_coding protein_coding MGP_129S1SvImJ_T0014923.1 MGP_129S1SvImJ_G0013012.1 mouse_genomes_project 5 21930861 21931259 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072679.1 MGP_129S1SvImJ_G0029754.1 mouse_genomes_project 5 93794018 93797907 + MGP_129S1SvImJ_P0072679 Stbd1 protein_coding protein_coding MGP_129S1SvImJ_T0072680.1 MGP_129S1SvImJ_G0029754.1 mouse_genomes_project 5 93794028 93799667 + MGP_129S1SvImJ_P0072680 Stbd1 protein_coding protein_coding MGP_129S1SvImJ_T0072681.1 MGP_129S1SvImJ_G0029754.1 mouse_genomes_project 5 93794045 93799382 + MGP_129S1SvImJ_P0072681 Stbd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0014980.1 MGP_129S1SvImJ_G0013069.1 mouse_genomes_project 5 42550166 42551928 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075847.1 MGP_129S1SvImJ_G0030364.1 mouse_genomes_project 5 150662452 150678056 + MGP_129S1SvImJ_P0075847 Zfp655 protein_coding protein_coding MGP_129S1SvImJ_T0075848.1 MGP_129S1SvImJ_G0030364.1 mouse_genomes_project 5 150662484 150678055 + MGP_129S1SvImJ_P0075848 Zfp655 protein_coding protein_coding MGP_129S1SvImJ_T0075849.1 MGP_129S1SvImJ_G0030364.1 mouse_genomes_project 5 150662485 150668140 + MGP_129S1SvImJ_P0075849 Zfp655 protein_coding protein_coding MGP_129S1SvImJ_T0075850.1 MGP_129S1SvImJ_G0030364.1 mouse_genomes_project 5 150662486 150668010 + MGP_129S1SvImJ_P0075850 Zfp655 protein_coding protein_coding MGP_129S1SvImJ_T0075851.1 MGP_129S1SvImJ_G0030364.1 mouse_genomes_project 5 150664167 150667974 + MGP_129S1SvImJ_P0075851 Zfp655 protein_coding protein_coding MGP_129S1SvImJ_T0073442.1 MGP_129S1SvImJ_G0029920.1 mouse_genomes_project 5 116366439 116400512 - MGP_129S1SvImJ_P0073442 1700069L16Rik protein_coding protein_coding MGP_129S1SvImJ_T0073443.1 MGP_129S1SvImJ_G0029920.1 mouse_genomes_project 5 116375642 116380427 - 1700069L16Rik protein_coding processed_transcript MGP_129S1SvImJ_T0073444.1 MGP_129S1SvImJ_G0029920.1 mouse_genomes_project 5 116379675 116400489 - MGP_129S1SvImJ_P0073444 1700069L16Rik protein_coding protein_coding MGP_129S1SvImJ_T0073820.1 MGP_129S1SvImJ_G0029990.1 mouse_genomes_project 5 120893398 120989217 + MGP_129S1SvImJ_P0073820 Nos1 protein_coding protein_coding MGP_129S1SvImJ_T0073821.1 MGP_129S1SvImJ_G0029990.1 mouse_genomes_project 5 120893421 120988847 + Nos1 protein_coding processed_transcript MGP_129S1SvImJ_T0073822.1 MGP_129S1SvImJ_G0029990.1 mouse_genomes_project 5 120960722 121091877 + MGP_129S1SvImJ_P0073822 Nos1 protein_coding protein_coding MGP_129S1SvImJ_T0073823.1 MGP_129S1SvImJ_G0029990.1 mouse_genomes_project 5 120961058 121087450 + MGP_129S1SvImJ_P0073823 Nos1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073824.1 MGP_129S1SvImJ_G0029990.1 mouse_genomes_project 5 120988874 121086996 + MGP_129S1SvImJ_P0073824 Nos1 protein_coding protein_coding MGP_129S1SvImJ_T0073825.1 MGP_129S1SvImJ_G0029990.1 mouse_genomes_project 5 120988879 121086900 + MGP_129S1SvImJ_P0073825 Nos1 protein_coding protein_coding MGP_129S1SvImJ_T0073826.1 MGP_129S1SvImJ_G0029990.1 mouse_genomes_project 5 121046658 121053194 + Nos1 protein_coding processed_transcript MGP_129S1SvImJ_T0073136.1 MGP_129S1SvImJ_G0029855.1 mouse_genomes_project 5 110546587 110547792 - MGP_129S1SvImJ_P0073136 Atp5k protein_coding protein_coding MGP_129S1SvImJ_T0073137.1 MGP_129S1SvImJ_G0029855.1 mouse_genomes_project 5 110546587 110547792 - MGP_129S1SvImJ_P0073137 Atp5k protein_coding protein_coding MGP_129S1SvImJ_T0073138.1 MGP_129S1SvImJ_G0029855.1 mouse_genomes_project 5 110546589 110547741 - Atp5k protein_coding retained_intron MGP_129S1SvImJ_T0075159.1 MGP_129S1SvImJ_G0030224.1 mouse_genomes_project 5 142046114 142069810 - MGP_129S1SvImJ_P0075159 Slc12a9 protein_coding protein_coding MGP_129S1SvImJ_T0075160.1 MGP_129S1SvImJ_G0030224.1 mouse_genomes_project 5 142052595 142053928 - Slc12a9 protein_coding retained_intron MGP_129S1SvImJ_T0075161.1 MGP_129S1SvImJ_G0030224.1 mouse_genomes_project 5 142064200 142069810 - Slc12a9 protein_coding retained_intron MGP_129S1SvImJ_T0075162.1 MGP_129S1SvImJ_G0030224.1 mouse_genomes_project 5 142068487 142069223 - MGP_129S1SvImJ_P0075162 Slc12a9 protein_coding protein_coding MGP_129S1SvImJ_T0001554.1 MGP_129S1SvImJ_G0001472.1 mouse_genomes_project 5 43013539 43013882 + TEC TEC MGP_129S1SvImJ_T0070192.1 MGP_129S1SvImJ_G0029292.1 mouse_genomes_project 5 6289196 6512206 + MGP_129S1SvImJ_P0070192 9330182L06Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070193.1 MGP_129S1SvImJ_G0029292.1 mouse_genomes_project 5 6289205 6496065 + MGP_129S1SvImJ_P0070193 9330182L06Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070194.1 MGP_129S1SvImJ_G0029292.1 mouse_genomes_project 5 6289208 6437611 + 9330182L06Rik protein_coding retained_intron MGP_129S1SvImJ_T0070195.1 MGP_129S1SvImJ_G0029292.1 mouse_genomes_project 5 6289210 6496449 + MGP_129S1SvImJ_P0070195 9330182L06Rik protein_coding protein_coding MGP_129S1SvImJ_T0070196.1 MGP_129S1SvImJ_G0029292.1 mouse_genomes_project 5 6289210 6513187 + MGP_129S1SvImJ_P0070196 9330182L06Rik protein_coding protein_coding MGP_129S1SvImJ_T0070197.1 MGP_129S1SvImJ_G0029292.1 mouse_genomes_project 5 6289227 6514295 + MGP_129S1SvImJ_P0070197 9330182L06Rik protein_coding protein_coding MGP_129S1SvImJ_T0070198.1 MGP_129S1SvImJ_G0029292.1 mouse_genomes_project 5 6289253 6493953 + MGP_129S1SvImJ_P0070198 9330182L06Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070199.1 MGP_129S1SvImJ_G0029292.1 mouse_genomes_project 5 6445707 6450258 + 9330182L06Rik protein_coding retained_intron MGP_129S1SvImJ_T0102570.1 MGP_129S1SvImJ_G0040403.1 mouse_genomes_project 5 89211579 89216045 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015225.1 MGP_129S1SvImJ_G0013314.1 mouse_genomes_project 5 151388823 151389146 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004692.1 MGP_129S1SvImJ_G0004068.1 mouse_genomes_project 5 37170516 37185985 + Clnkos antisense antisense MGP_129S1SvImJ_T0004693.1 MGP_129S1SvImJ_G0004068.1 mouse_genomes_project 5 37170517 37185985 + Clnkos antisense antisense MGP_129S1SvImJ_T0101210.1 MGP_129S1SvImJ_G0039277.1 mouse_genomes_project 5 102343034 102343168 + Gm26286 snoRNA snoRNA MGP_129S1SvImJ_T0015075.1 MGP_129S1SvImJ_G0013164.1 mouse_genomes_project 5 88544088 88544497 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001808.1 MGP_129S1SvImJ_G0001723.1 mouse_genomes_project 5 121166238 121167160 - TEC TEC MGP_129S1SvImJ_T0074744.1 MGP_129S1SvImJ_G0030153.1 mouse_genomes_project 5 138555459 138595694 + MGP_129S1SvImJ_P0074744 Gtf2ird2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074745.1 MGP_129S1SvImJ_G0030153.1 mouse_genomes_project 5 138555480 138589518 + MGP_129S1SvImJ_P0074745 Gtf2ird2 protein_coding protein_coding MGP_129S1SvImJ_T0074746.1 MGP_129S1SvImJ_G0030153.1 mouse_genomes_project 5 138569386 138570014 + Gtf2ird2 protein_coding processed_transcript MGP_129S1SvImJ_T0074747.1 MGP_129S1SvImJ_G0030153.1 mouse_genomes_project 5 138578026 138587580 + Gtf2ird2 protein_coding retained_intron MGP_129S1SvImJ_T0074748.1 MGP_129S1SvImJ_G0030153.1 mouse_genomes_project 5 138585474 138587978 + MGP_129S1SvImJ_P0074748 Gtf2ird2 protein_coding protein_coding MGP_129S1SvImJ_T0099905.1 MGP_129S1SvImJ_G0037972.1 mouse_genomes_project 5 21522206 21522361 - Gm22054 snRNA snRNA MGP_129S1SvImJ_T0070389.1 MGP_129S1SvImJ_G0029332.1 mouse_genomes_project 5 21473988 21476287 + MGP_129S1SvImJ_P0070389 Rint1 protein_coding protein_coding MGP_129S1SvImJ_T0070390.1 MGP_129S1SvImJ_G0029332.1 mouse_genomes_project 5 21473988 21508570 + MGP_129S1SvImJ_P0070390 Rint1 protein_coding protein_coding MGP_129S1SvImJ_T0070391.1 MGP_129S1SvImJ_G0029332.1 mouse_genomes_project 5 21473989 21480127 + MGP_129S1SvImJ_P0070391 Rint1 protein_coding protein_coding MGP_129S1SvImJ_T0070392.1 MGP_129S1SvImJ_G0029332.1 mouse_genomes_project 5 21473992 21508498 + MGP_129S1SvImJ_P0070392 Rint1 protein_coding protein_coding MGP_129S1SvImJ_T0070393.1 MGP_129S1SvImJ_G0029332.1 mouse_genomes_project 5 21473996 21508569 + Rint1 protein_coding retained_intron MGP_129S1SvImJ_T0070394.1 MGP_129S1SvImJ_G0029332.1 mouse_genomes_project 5 21473998 21476312 + Rint1 protein_coding retained_intron MGP_129S1SvImJ_T0070395.1 MGP_129S1SvImJ_G0029332.1 mouse_genomes_project 5 21474018 21483471 + Rint1 protein_coding processed_transcript MGP_129S1SvImJ_T0070396.1 MGP_129S1SvImJ_G0029332.1 mouse_genomes_project 5 21491961 21495285 + Rint1 protein_coding retained_intron MGP_129S1SvImJ_T0070397.1 MGP_129S1SvImJ_G0029332.1 mouse_genomes_project 5 21496880 21504016 + Rint1 protein_coding processed_transcript MGP_129S1SvImJ_T0071493.1 MGP_129S1SvImJ_G0029521.1 mouse_genomes_project 5 41841757 41902990 + MGP_129S1SvImJ_P0071493 Cpeb2 protein_coding protein_coding MGP_129S1SvImJ_T0071494.1 MGP_129S1SvImJ_G0029521.1 mouse_genomes_project 5 41842050 41898397 + MGP_129S1SvImJ_P0071494 Cpeb2 protein_coding protein_coding MGP_129S1SvImJ_T0071495.1 MGP_129S1SvImJ_G0029521.1 mouse_genomes_project 5 41842514 41846507 + Cpeb2 protein_coding retained_intron MGP_129S1SvImJ_T0071496.1 MGP_129S1SvImJ_G0029521.1 mouse_genomes_project 5 41843625 41893661 + MGP_129S1SvImJ_P0071496 Cpeb2 protein_coding protein_coding MGP_129S1SvImJ_T0071497.1 MGP_129S1SvImJ_G0029521.1 mouse_genomes_project 5 41843637 41844473 + Cpeb2 protein_coding processed_transcript MGP_129S1SvImJ_T0071498.1 MGP_129S1SvImJ_G0029521.1 mouse_genomes_project 5 41845902 41856618 + Cpeb2 protein_coding processed_transcript MGP_129S1SvImJ_T0102555.1 MGP_129S1SvImJ_G0040388.1 mouse_genomes_project 5 4658372 4659209 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0071552.1 MGP_129S1SvImJ_G0029530.1 mouse_genomes_project 5 43123827 43478950 - MGP_129S1SvImJ_P0071552 Ldb2 protein_coding protein_coding MGP_129S1SvImJ_T0071553.1 MGP_129S1SvImJ_G0029530.1 mouse_genomes_project 5 43123827 43478909 - MGP_129S1SvImJ_P0071553 Ldb2 protein_coding protein_coding MGP_129S1SvImJ_T0071554.1 MGP_129S1SvImJ_G0029530.1 mouse_genomes_project 5 43123827 43478889 - MGP_129S1SvImJ_P0071554 Ldb2 protein_coding protein_coding MGP_129S1SvImJ_T0071555.1 MGP_129S1SvImJ_G0029530.1 mouse_genomes_project 5 43123835 43478872 - MGP_129S1SvImJ_P0071555 Ldb2 protein_coding protein_coding MGP_129S1SvImJ_T0071556.1 MGP_129S1SvImJ_G0029530.1 mouse_genomes_project 5 43130820 43252625 - Ldb2 protein_coding processed_transcript MGP_129S1SvImJ_T0071557.1 MGP_129S1SvImJ_G0029530.1 mouse_genomes_project 5 43179659 43189748 - Ldb2 protein_coding processed_transcript MGP_129S1SvImJ_T0071558.1 MGP_129S1SvImJ_G0029530.1 mouse_genomes_project 5 43196263 43478922 - Ldb2 protein_coding retained_intron MGP_129S1SvImJ_T0010682.1 MGP_129S1SvImJ_G0008798.1 mouse_genomes_project 5 6402771 6402847 + Mir879 miRNA miRNA MGP_129S1SvImJ_T0075859.1 MGP_129S1SvImJ_G0030369.1 mouse_genomes_project 5 151307643 151351610 - MGP_129S1SvImJ_P0075859 protein_coding protein_coding MGP_129S1SvImJ_T0099934.1 MGP_129S1SvImJ_G0038001.1 mouse_genomes_project 5 81447923 81448026 + Gm22974 snRNA snRNA MGP_129S1SvImJ_T0072604.1 MGP_129S1SvImJ_G0029742.1 mouse_genomes_project 5 93206352 93240157 - MGP_129S1SvImJ_P0072604 G3bp2 protein_coding protein_coding MGP_129S1SvImJ_T0072605.1 MGP_129S1SvImJ_G0029742.1 mouse_genomes_project 5 93206370 93240319 - MGP_129S1SvImJ_P0072605 G3bp2 protein_coding protein_coding MGP_129S1SvImJ_T0072606.1 MGP_129S1SvImJ_G0029742.1 mouse_genomes_project 5 93207923 93239838 - MGP_129S1SvImJ_P0072606 G3bp2 protein_coding protein_coding MGP_129S1SvImJ_T0072607.1 MGP_129S1SvImJ_G0029742.1 mouse_genomes_project 5 93207923 93240113 - MGP_129S1SvImJ_P0072607 G3bp2 protein_coding protein_coding MGP_129S1SvImJ_T0072608.1 MGP_129S1SvImJ_G0029742.1 mouse_genomes_project 5 93208706 93240258 - MGP_129S1SvImJ_P0072608 G3bp2 protein_coding protein_coding MGP_129S1SvImJ_T0072609.1 MGP_129S1SvImJ_G0029742.1 mouse_genomes_project 5 93210567 93221708 - G3bp2 protein_coding processed_transcript MGP_129S1SvImJ_T0072610.1 MGP_129S1SvImJ_G0029742.1 mouse_genomes_project 5 93212025 93221699 - G3bp2 protein_coding retained_intron MGP_129S1SvImJ_T0072611.1 MGP_129S1SvImJ_G0029742.1 mouse_genomes_project 5 93220705 93227631 - MGP_129S1SvImJ_P0072611 G3bp2 protein_coding protein_coding MGP_129S1SvImJ_T0072612.1 MGP_129S1SvImJ_G0029742.1 mouse_genomes_project 5 93222457 93239863 - MGP_129S1SvImJ_P0072612 G3bp2 protein_coding protein_coding MGP_129S1SvImJ_T0072613.1 MGP_129S1SvImJ_G0029742.1 mouse_genomes_project 5 93224015 93240317 - G3bp2 protein_coding retained_intron MGP_129S1SvImJ_T0075007.1 MGP_129S1SvImJ_G0030198.1 mouse_genomes_project 5 140668045 140679186 + Upk3bl protein_coding processed_transcript MGP_129S1SvImJ_T0075008.1 MGP_129S1SvImJ_G0030198.1 mouse_genomes_project 5 140670744 140679186 + MGP_129S1SvImJ_P0075008 Upk3bl protein_coding protein_coding MGP_129S1SvImJ_T0075009.1 MGP_129S1SvImJ_G0030198.1 mouse_genomes_project 5 140670820 140679181 + MGP_129S1SvImJ_P0075009 Upk3bl protein_coding protein_coding MGP_129S1SvImJ_T0075010.1 MGP_129S1SvImJ_G0030198.1 mouse_genomes_project 5 140670820 140679188 + MGP_129S1SvImJ_P0075010 Upk3bl protein_coding protein_coding MGP_129S1SvImJ_T0075011.1 MGP_129S1SvImJ_G0030198.1 mouse_genomes_project 5 140673607 140679172 + Upk3bl protein_coding processed_transcript MGP_129S1SvImJ_T0075012.1 MGP_129S1SvImJ_G0030198.1 mouse_genomes_project 5 140673680 140679174 + MGP_129S1SvImJ_P0075012 Upk3bl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075732.1 MGP_129S1SvImJ_G0030341.1 mouse_genomes_project 5 149232014 149241366 + MGP_129S1SvImJ_P0075732 Gm42421 protein_coding protein_coding MGP_129S1SvImJ_T0008375.1 MGP_129S1SvImJ_G0006805.1 mouse_genomes_project 5 127896083 127897239 - Gm16001 lincRNA lincRNA MGP_129S1SvImJ_T0008376.1 MGP_129S1SvImJ_G0006805.1 mouse_genomes_project 5 127896112 127897192 - Gm16001 lincRNA lincRNA MGP_129S1SvImJ_T0001916.1 MGP_129S1SvImJ_G0001829.1 mouse_genomes_project 5 146478387 146480757 - TEC TEC MGP_129S1SvImJ_T0101726.1 MGP_129S1SvImJ_G0039728.1 mouse_genomes_project 5 76373143 76373613 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0001474.1 MGP_129S1SvImJ_G0001395.1 mouse_genomes_project 5 10855896 10857752 - TEC TEC MGP_129S1SvImJ_T0001910.1 MGP_129S1SvImJ_G0001823.1 mouse_genomes_project 5 143634465 143635256 + TEC TEC MGP_129S1SvImJ_T0008239.1 MGP_129S1SvImJ_G0006718.1 mouse_genomes_project 5 101901655 101911910 - 5430416N02Rik lincRNA lincRNA MGP_129S1SvImJ_T0008240.1 MGP_129S1SvImJ_G0006718.1 mouse_genomes_project 5 101904468 101911891 - 5430416N02Rik lincRNA lincRNA MGP_129S1SvImJ_T0008241.1 MGP_129S1SvImJ_G0006718.1 mouse_genomes_project 5 101911110 101911750 - 5430416N02Rik lincRNA lincRNA MGP_129S1SvImJ_T0008242.1 MGP_129S1SvImJ_G0006718.1 mouse_genomes_project 5 101911368 101911890 - 5430416N02Rik lincRNA lincRNA MGP_129S1SvImJ_T0102578.1 MGP_129S1SvImJ_G0040411.1 mouse_genomes_project 5 141702493 141704396 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0001712.1 MGP_129S1SvImJ_G0001627.1 mouse_genomes_project 5 74106682 74107432 + TEC TEC MGP_129S1SvImJ_T0014982.1 MGP_129S1SvImJ_G0013071.1 mouse_genomes_project 5 43012695 43015420 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004809.1 MGP_129S1SvImJ_G0004151.1 mouse_genomes_project 5 118316958 118317537 - 4930430O22Rik antisense antisense MGP_129S1SvImJ_T0004810.1 MGP_129S1SvImJ_G0004151.1 mouse_genomes_project 5 118316960 118317499 - 4930430O22Rik antisense antisense MGP_129S1SvImJ_T0008404.1 MGP_129S1SvImJ_G0006823.1 mouse_genomes_project 5 132533404 132534901 - 4930573I07Rik lincRNA lincRNA MGP_129S1SvImJ_T0008405.1 MGP_129S1SvImJ_G0006823.1 mouse_genomes_project 5 132533406 132534924 - 4930573I07Rik lincRNA lincRNA MGP_129S1SvImJ_T0008363.1 MGP_129S1SvImJ_G0006800.1 mouse_genomes_project 5 126820532 126822521 + Gm38102 lincRNA lincRNA MGP_129S1SvImJ_T0008367.1 MGP_129S1SvImJ_G0006800.1 mouse_genomes_project 5 126822351 126824286 + Gm38102 lincRNA lincRNA MGP_129S1SvImJ_T0101223.1 MGP_129S1SvImJ_G0039290.1 mouse_genomes_project 5 152839939 152840069 - Gm24556 snoRNA snoRNA MGP_129S1SvImJ_T0072385.1 MGP_129S1SvImJ_G0029674.1 mouse_genomes_project 5 87655456 87690682 + MGP_129S1SvImJ_P0072385 Ythdc1 protein_coding protein_coding MGP_129S1SvImJ_T0072386.1 MGP_129S1SvImJ_G0029674.1 mouse_genomes_project 5 87655468 87690687 + MGP_129S1SvImJ_P0072386 Ythdc1 protein_coding protein_coding MGP_129S1SvImJ_T0072387.1 MGP_129S1SvImJ_G0029674.1 mouse_genomes_project 5 87655731 87690687 + MGP_129S1SvImJ_P0072387 Ythdc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072388.1 MGP_129S1SvImJ_G0029674.1 mouse_genomes_project 5 87655799 87689603 + MGP_129S1SvImJ_P0072388 Ythdc1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0072389.1 MGP_129S1SvImJ_G0029674.1 mouse_genomes_project 5 87655799 87690685 + MGP_129S1SvImJ_P0072389 Ythdc1 protein_coding protein_coding MGP_129S1SvImJ_T0072390.1 MGP_129S1SvImJ_G0029674.1 mouse_genomes_project 5 87657643 87660712 + Ythdc1 protein_coding retained_intron MGP_129S1SvImJ_T0072391.1 MGP_129S1SvImJ_G0029674.1 mouse_genomes_project 5 87669349 87690687 + Ythdc1 protein_coding retained_intron MGP_129S1SvImJ_T0072392.1 MGP_129S1SvImJ_G0029674.1 mouse_genomes_project 5 87676877 87682026 + Ythdc1 protein_coding retained_intron MGP_129S1SvImJ_T0072393.1 MGP_129S1SvImJ_G0029674.1 mouse_genomes_project 5 87683010 87689427 + Ythdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0072394.1 MGP_129S1SvImJ_G0029674.1 mouse_genomes_project 5 87685455 87690685 + Ythdc1 protein_coding retained_intron MGP_129S1SvImJ_T0001505.1 MGP_129S1SvImJ_G0001425.1 mouse_genomes_project 5 27190806 27195101 - TEC TEC MGP_129S1SvImJ_T0015199.1 MGP_129S1SvImJ_G0013288.1 mouse_genomes_project 5 142783264 142783624 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101217.1 MGP_129S1SvImJ_G0039284.1 mouse_genomes_project 5 124665535 124665669 + Gm26205 snoRNA snoRNA MGP_129S1SvImJ_T0073930.1 MGP_129S1SvImJ_G0030015.1 mouse_genomes_project 5 124215437 124230497 - MGP_129S1SvImJ_P0073930 protein_coding protein_coding MGP_129S1SvImJ_T0073931.1 MGP_129S1SvImJ_G0030015.1 mouse_genomes_project 5 124217768 124230523 - protein_coding processed_transcript MGP_129S1SvImJ_T0099976.1 MGP_129S1SvImJ_G0038043.1 mouse_genomes_project 5 146739662 146739769 - Gm24131 snRNA snRNA MGP_129S1SvImJ_T0004710.1 MGP_129S1SvImJ_G0004078.1 mouse_genomes_project 5 46787080 46789723 - 4930518C09Rik antisense antisense MGP_129S1SvImJ_T0001576.1 MGP_129S1SvImJ_G0001494.1 mouse_genomes_project 5 47124698 47126102 + TEC TEC MGP_129S1SvImJ_T0001826.1 MGP_129S1SvImJ_G0001741.1 mouse_genomes_project 5 125305378 125310973 + TEC TEC MGP_129S1SvImJ_T0075581.1 MGP_129S1SvImJ_G0030311.1 mouse_genomes_project 5 147693852 147696463 + MGP_129S1SvImJ_P0075581 Ap5z1 protein_coding protein_coding MGP_129S1SvImJ_T0075582.1 MGP_129S1SvImJ_G0030311.1 mouse_genomes_project 5 147693907 147708902 + Ap5z1 protein_coding processed_transcript MGP_129S1SvImJ_T0075583.1 MGP_129S1SvImJ_G0030311.1 mouse_genomes_project 5 147693952 147701247 + MGP_129S1SvImJ_P0075583 Ap5z1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075584.1 MGP_129S1SvImJ_G0030311.1 mouse_genomes_project 5 147693962 147715394 + MGP_129S1SvImJ_P0075584 Ap5z1 protein_coding protein_coding MGP_129S1SvImJ_T0075585.1 MGP_129S1SvImJ_G0030311.1 mouse_genomes_project 5 147693969 147714486 + Ap5z1 protein_coding retained_intron MGP_129S1SvImJ_T0075586.1 MGP_129S1SvImJ_G0030311.1 mouse_genomes_project 5 147693982 147714738 + MGP_129S1SvImJ_P0075586 Ap5z1 protein_coding protein_coding MGP_129S1SvImJ_T0075587.1 MGP_129S1SvImJ_G0030311.1 mouse_genomes_project 5 147710782 147712437 + Ap5z1 protein_coding retained_intron MGP_129S1SvImJ_T0015125.1 MGP_129S1SvImJ_G0013214.1 mouse_genomes_project 5 108707862 108708510 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001818.1 MGP_129S1SvImJ_G0001733.1 mouse_genomes_project 5 123915000 123915985 - TEC TEC MGP_129S1SvImJ_T0071488.1 MGP_129S1SvImJ_G0029519.1 mouse_genomes_project 5 40373084 40434475 - MGP_129S1SvImJ_P0071488 Bod1l protein_coding protein_coding MGP_129S1SvImJ_T0071489.1 MGP_129S1SvImJ_G0029519.1 mouse_genomes_project 5 40373084 40434475 - MGP_129S1SvImJ_P0071489 Bod1l protein_coding protein_coding MGP_129S1SvImJ_T0071490.1 MGP_129S1SvImJ_G0029519.1 mouse_genomes_project 5 40409769 40412234 - Bod1l protein_coding processed_transcript MGP_129S1SvImJ_T0071491.1 MGP_129S1SvImJ_G0029519.1 mouse_genomes_project 5 40410661 40434452 - Bod1l protein_coding retained_intron MGP_129S1SvImJ_T0073857.1 MGP_129S1SvImJ_G0029998.1 mouse_genomes_project 5 122954972 122957961 + Tbx3 protein_coding retained_intron MGP_129S1SvImJ_T0073858.1 MGP_129S1SvImJ_G0029998.1 mouse_genomes_project 5 122954972 122968871 + MGP_129S1SvImJ_P0073858 Tbx3 protein_coding protein_coding MGP_129S1SvImJ_T0073859.1 MGP_129S1SvImJ_G0029998.1 mouse_genomes_project 5 122955165 122969033 + MGP_129S1SvImJ_P0073859 Tbx3 protein_coding protein_coding MGP_129S1SvImJ_T0073860.1 MGP_129S1SvImJ_G0029998.1 mouse_genomes_project 5 122955321 122969033 + MGP_129S1SvImJ_P0073860 Tbx3 protein_coding protein_coding MGP_129S1SvImJ_T0073861.1 MGP_129S1SvImJ_G0029998.1 mouse_genomes_project 5 122959739 122964917 + Tbx3 protein_coding retained_intron MGP_129S1SvImJ_T0073862.1 MGP_129S1SvImJ_G0029998.1 mouse_genomes_project 5 122964535 122965119 + Tbx3 protein_coding processed_transcript MGP_129S1SvImJ_T0014969.1 MGP_129S1SvImJ_G0013058.1 mouse_genomes_project 5 35650098 35650249 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075868.1 MGP_129S1SvImJ_G0030374.1 mouse_genomes_project 5 151771563 151784878 - MGP_129S1SvImJ_P0075868 Rnf6 protein_coding protein_coding MGP_129S1SvImJ_T0075869.1 MGP_129S1SvImJ_G0030374.1 mouse_genomes_project 5 151771567 151784219 - MGP_129S1SvImJ_P0075869 Rnf6 protein_coding protein_coding MGP_129S1SvImJ_T0075870.1 MGP_129S1SvImJ_G0030374.1 mouse_genomes_project 5 151772327 151784294 - MGP_129S1SvImJ_P0075870 Rnf6 protein_coding protein_coding MGP_129S1SvImJ_T0075871.1 MGP_129S1SvImJ_G0030374.1 mouse_genomes_project 5 151773673 151781360 - MGP_129S1SvImJ_P0075871 Rnf6 protein_coding protein_coding MGP_129S1SvImJ_T0075872.1 MGP_129S1SvImJ_G0030374.1 mouse_genomes_project 5 151774046 151784741 - MGP_129S1SvImJ_P0075872 Rnf6 protein_coding protein_coding MGP_129S1SvImJ_T0075873.1 MGP_129S1SvImJ_G0030374.1 mouse_genomes_project 5 151774074 151784253 - MGP_129S1SvImJ_P0075873 Rnf6 protein_coding protein_coding MGP_129S1SvImJ_T0075874.1 MGP_129S1SvImJ_G0030374.1 mouse_genomes_project 5 151774223 151784266 - MGP_129S1SvImJ_P0075874 Rnf6 protein_coding protein_coding MGP_129S1SvImJ_T0075875.1 MGP_129S1SvImJ_G0030374.1 mouse_genomes_project 5 151781449 151784264 - Rnf6 protein_coding processed_transcript MGP_129S1SvImJ_T0008445.1 MGP_129S1SvImJ_G0006852.1 mouse_genomes_project 5 149125592 149129986 + D130017N08Rik lincRNA lincRNA MGP_129S1SvImJ_T0075954.1 MGP_129S1SvImJ_G0030392.1 mouse_genomes_project 5 153562690 153564885 + Pomp protein_coding retained_intron MGP_129S1SvImJ_T0075955.1 MGP_129S1SvImJ_G0030392.1 mouse_genomes_project 5 153562706 153575110 + MGP_129S1SvImJ_P0075955 Pomp protein_coding protein_coding MGP_129S1SvImJ_T0075956.1 MGP_129S1SvImJ_G0030392.1 mouse_genomes_project 5 153562742 153578468 + MGP_129S1SvImJ_P0075956 Pomp protein_coding protein_coding MGP_129S1SvImJ_T0075957.1 MGP_129S1SvImJ_G0030392.1 mouse_genomes_project 5 153572431 153577658 + Pomp protein_coding processed_transcript MGP_129S1SvImJ_T0075958.1 MGP_129S1SvImJ_G0030392.1 mouse_genomes_project 5 153574480 153577616 + Pomp protein_coding retained_intron MGP_129S1SvImJ_T0001661.1 MGP_129S1SvImJ_G0001577.1 mouse_genomes_project 5 65469364 65471869 + TEC TEC MGP_129S1SvImJ_T0004791.1 MGP_129S1SvImJ_G0004138.1 mouse_genomes_project 5 112777824 112779822 - Gm15792 antisense antisense MGP_129S1SvImJ_T0004734.1 MGP_129S1SvImJ_G0004100.1 mouse_genomes_project 5 74050051 74066657 + Usp46os1 antisense antisense MGP_129S1SvImJ_T0015176.1 MGP_129S1SvImJ_G0013265.1 mouse_genomes_project 5 128298512 128298876 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001469.1 MGP_129S1SvImJ_G0001390.1 mouse_genomes_project 5 10322891 10325388 - TEC TEC MGP_129S1SvImJ_T0070291.1 MGP_129S1SvImJ_G0029314.1 mouse_genomes_project 5 18725753 18804131 + Gsap protein_coding retained_intron MGP_129S1SvImJ_T0070292.1 MGP_129S1SvImJ_G0029314.1 mouse_genomes_project 5 18725765 18836091 + MGP_129S1SvImJ_P0070292 Gsap protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070293.1 MGP_129S1SvImJ_G0029314.1 mouse_genomes_project 5 18725787 18836113 + MGP_129S1SvImJ_P0070293 Gsap protein_coding protein_coding MGP_129S1SvImJ_T0070294.1 MGP_129S1SvImJ_G0029314.1 mouse_genomes_project 5 18725797 18730445 + Gsap protein_coding processed_transcript MGP_129S1SvImJ_T0070295.1 MGP_129S1SvImJ_G0029314.1 mouse_genomes_project 5 18725810 18796138 + MGP_129S1SvImJ_P0070295 Gsap protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070296.1 MGP_129S1SvImJ_G0029314.1 mouse_genomes_project 5 18725811 18833024 + MGP_129S1SvImJ_P0070296 Gsap protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070297.1 MGP_129S1SvImJ_G0029314.1 mouse_genomes_project 5 18725811 18833024 + MGP_129S1SvImJ_P0070297 Gsap protein_coding protein_coding MGP_129S1SvImJ_T0070298.1 MGP_129S1SvImJ_G0029314.1 mouse_genomes_project 5 18795506 18802649 + Gsap protein_coding retained_intron MGP_129S1SvImJ_T0070299.1 MGP_129S1SvImJ_G0029314.1 mouse_genomes_project 5 18834170 18861786 + MGP_129S1SvImJ_P0070299 Gsap protein_coding protein_coding MGP_129S1SvImJ_T0070300.1 MGP_129S1SvImJ_G0029314.1 mouse_genomes_project 5 18834250 18861787 + Gsap protein_coding processed_transcript MGP_129S1SvImJ_T0098605.1 MGP_129S1SvImJ_G0036690.1 mouse_genomes_project 5 91985232 91985349 + Gm22816 rRNA rRNA MGP_129S1SvImJ_T0004830.1 MGP_129S1SvImJ_G0004163.1 mouse_genomes_project 5 123773673 123785550 - Gm27199 antisense antisense MGP_129S1SvImJ_T0015091.1 MGP_129S1SvImJ_G0013180.1 mouse_genomes_project 5 92931727 92932222 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001665.1 MGP_129S1SvImJ_G0001581.1 mouse_genomes_project 5 65611725 65616482 + TEC TEC MGP_129S1SvImJ_T0001472.1 MGP_129S1SvImJ_G0001393.1 mouse_genomes_project 5 10781785 10785825 + TEC TEC MGP_129S1SvImJ_T0072458.1 MGP_129S1SvImJ_G0029694.1 mouse_genomes_project 5 88851202 88864665 + MGP_129S1SvImJ_P0072458 Odam protein_coding protein_coding MGP_129S1SvImJ_T0072459.1 MGP_129S1SvImJ_G0029694.1 mouse_genomes_project 5 88851868 88863236 + MGP_129S1SvImJ_P0072459 Odam protein_coding protein_coding MGP_129S1SvImJ_T0102577.1 MGP_129S1SvImJ_G0040410.1 mouse_genomes_project 5 129716659 129717342 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0001551.1 MGP_129S1SvImJ_G0001469.1 mouse_genomes_project 5 42751919 42753610 + TEC TEC MGP_129S1SvImJ_T0015150.1 MGP_129S1SvImJ_G0013239.1 mouse_genomes_project 5 113493603 113493970 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004881.1 MGP_129S1SvImJ_G0004202.1 mouse_genomes_project 5 140746130 140746835 - Gm43604 antisense antisense MGP_129S1SvImJ_T0001684.1 MGP_129S1SvImJ_G0001600.1 mouse_genomes_project 5 67389691 67390301 - TEC TEC MGP_129S1SvImJ_T0070915.1 MGP_129S1SvImJ_G0029427.1 mouse_genomes_project 5 29515321 29534656 + MGP_129S1SvImJ_P0070915 Gpn1 protein_coding protein_coding MGP_129S1SvImJ_T0070916.1 MGP_129S1SvImJ_G0029427.1 mouse_genomes_project 5 29515332 29523600 + Gpn1 protein_coding retained_intron MGP_129S1SvImJ_T0070917.1 MGP_129S1SvImJ_G0029427.1 mouse_genomes_project 5 29515333 29518299 + MGP_129S1SvImJ_P0070917 Gpn1 protein_coding protein_coding MGP_129S1SvImJ_T0070918.1 MGP_129S1SvImJ_G0029427.1 mouse_genomes_project 5 29515347 29519863 + MGP_129S1SvImJ_P0070918 Gpn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070919.1 MGP_129S1SvImJ_G0029427.1 mouse_genomes_project 5 29515374 29524107 + Gpn1 protein_coding retained_intron MGP_129S1SvImJ_T0070920.1 MGP_129S1SvImJ_G0029427.1 mouse_genomes_project 5 29515581 29517907 + Gpn1 protein_coding processed_transcript MGP_129S1SvImJ_T0070921.1 MGP_129S1SvImJ_G0029427.1 mouse_genomes_project 5 29527411 29531204 + Gpn1 protein_coding retained_intron MGP_129S1SvImJ_T0001638.1 MGP_129S1SvImJ_G0001555.1 mouse_genomes_project 5 57488485 57492349 - TEC TEC MGP_129S1SvImJ_T0014975.1 MGP_129S1SvImJ_G0013064.1 mouse_genomes_project 5 39926731 39927540 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010758.1 MGP_129S1SvImJ_G0008874.1 mouse_genomes_project 5 150288562 150288647 - Mir7039 miRNA miRNA MGP_129S1SvImJ_T0070243.1 MGP_129S1SvImJ_G0029304.1 mouse_genomes_project 5 14854027 14858803 + MGP_129S1SvImJ_P0070243 protein_coding protein_coding MGP_129S1SvImJ_T0072597.1 MGP_129S1SvImJ_G0029741.1 mouse_genomes_project 5 93156403 93196275 - MGP_129S1SvImJ_P0072597 Cdkl2 protein_coding protein_coding MGP_129S1SvImJ_T0072598.1 MGP_129S1SvImJ_G0029741.1 mouse_genomes_project 5 93156403 93196276 - MGP_129S1SvImJ_P0072598 Cdkl2 protein_coding protein_coding MGP_129S1SvImJ_T0072599.1 MGP_129S1SvImJ_G0029741.1 mouse_genomes_project 5 93158133 93195930 - MGP_129S1SvImJ_P0072599 Cdkl2 protein_coding protein_coding MGP_129S1SvImJ_T0072600.1 MGP_129S1SvImJ_G0029741.1 mouse_genomes_project 5 93158152 93195906 - MGP_129S1SvImJ_P0072600 Cdkl2 protein_coding protein_coding MGP_129S1SvImJ_T0072601.1 MGP_129S1SvImJ_G0029741.1 mouse_genomes_project 5 93158365 93167827 - Cdkl2 protein_coding retained_intron MGP_129S1SvImJ_T0072602.1 MGP_129S1SvImJ_G0029741.1 mouse_genomes_project 5 93173562 93184319 - MGP_129S1SvImJ_P0072602 Cdkl2 protein_coding protein_coding MGP_129S1SvImJ_T0072603.1 MGP_129S1SvImJ_G0029741.1 mouse_genomes_project 5 93195500 93197127 - Cdkl2 protein_coding TEC MGP_129S1SvImJ_T0073634.1 MGP_129S1SvImJ_G0029957.1 mouse_genomes_project 5 117942418 117952151 - Acads protein_coding retained_intron MGP_129S1SvImJ_T0073635.1 MGP_129S1SvImJ_G0029957.1 mouse_genomes_project 5 117942418 117952210 - MGP_129S1SvImJ_P0073635 Acads protein_coding protein_coding MGP_129S1SvImJ_T0073636.1 MGP_129S1SvImJ_G0029957.1 mouse_genomes_project 5 117944115 117952174 - Acads protein_coding processed_transcript MGP_129S1SvImJ_T0073637.1 MGP_129S1SvImJ_G0029957.1 mouse_genomes_project 5 117944903 117952139 - Acads protein_coding retained_intron MGP_129S1SvImJ_T0101208.1 MGP_129S1SvImJ_G0039275.1 mouse_genomes_project 5 101299700 101299776 + Gm26252 snoRNA snoRNA MGP_129S1SvImJ_T0008198.1 MGP_129S1SvImJ_G0006685.1 mouse_genomes_project 5 82730041 82732344 - 1700031L13Rik lincRNA lincRNA MGP_129S1SvImJ_T0008199.1 MGP_129S1SvImJ_G0006685.1 mouse_genomes_project 5 82730060 82732347 - 1700031L13Rik lincRNA lincRNA MGP_129S1SvImJ_T0008200.1 MGP_129S1SvImJ_G0006685.1 mouse_genomes_project 5 82730070 82730979 - 1700031L13Rik lincRNA lincRNA MGP_129S1SvImJ_T0008201.1 MGP_129S1SvImJ_G0006685.1 mouse_genomes_project 5 82730319 82730971 - 1700031L13Rik lincRNA lincRNA MGP_129S1SvImJ_T0074579.1 MGP_129S1SvImJ_G0030122.1 mouse_genomes_project 5 133039648 133063640 - MGP_129S1SvImJ_P0074579 Stx2 protein_coding protein_coding MGP_129S1SvImJ_T0074580.1 MGP_129S1SvImJ_G0030122.1 mouse_genomes_project 5 133039654 133063601 - MGP_129S1SvImJ_P0074580 Stx2 protein_coding protein_coding MGP_129S1SvImJ_T0074581.1 MGP_129S1SvImJ_G0030122.1 mouse_genomes_project 5 133041246 133044250 - Stx2 protein_coding retained_intron MGP_129S1SvImJ_T0074582.1 MGP_129S1SvImJ_G0030122.1 mouse_genomes_project 5 133043756 133044941 - Stx2 protein_coding retained_intron MGP_129S1SvImJ_T0074583.1 MGP_129S1SvImJ_G0030122.1 mouse_genomes_project 5 133043999 133063489 - Stx2 protein_coding processed_transcript MGP_129S1SvImJ_T0074584.1 MGP_129S1SvImJ_G0030122.1 mouse_genomes_project 5 133045732 133063615 - Stx2 protein_coding retained_intron MGP_129S1SvImJ_T0074585.1 MGP_129S1SvImJ_G0030122.1 mouse_genomes_project 5 133048585 133063510 - MGP_129S1SvImJ_P0074585 Stx2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074586.1 MGP_129S1SvImJ_G0030122.1 mouse_genomes_project 5 133048599 133054716 - MGP_129S1SvImJ_P0074586 Stx2 protein_coding protein_coding MGP_129S1SvImJ_T0074587.1 MGP_129S1SvImJ_G0030122.1 mouse_genomes_project 5 133054168 133063612 - Stx2 protein_coding retained_intron MGP_129S1SvImJ_T0018207.1 MGP_129S1SvImJ_G0015610.1 mouse_genomes_project 5 112597339 112605383 - Gm15787 processed_transcript antisense MGP_129S1SvImJ_T0018208.1 MGP_129S1SvImJ_G0015610.1 mouse_genomes_project 5 112597951 112619533 - Gm15787 processed_transcript processed_transcript MGP_129S1SvImJ_T0018209.1 MGP_129S1SvImJ_G0015610.1 mouse_genomes_project 5 112605393 112619472 - Gm15787 processed_transcript antisense MGP_129S1SvImJ_T0018210.1 MGP_129S1SvImJ_G0015610.1 mouse_genomes_project 5 112610492 112619533 - Gm15787 processed_transcript antisense MGP_129S1SvImJ_T0018211.1 MGP_129S1SvImJ_G0015610.1 mouse_genomes_project 5 112611179 112619495 - Gm15787 processed_transcript antisense MGP_129S1SvImJ_T0018212.1 MGP_129S1SvImJ_G0015610.1 mouse_genomes_project 5 112611241 112612881 - Gm15787 processed_transcript antisense MGP_129S1SvImJ_T0018213.1 MGP_129S1SvImJ_G0015610.1 mouse_genomes_project 5 112612582 112619533 - Gm15787 processed_transcript antisense MGP_129S1SvImJ_T0018214.1 MGP_129S1SvImJ_G0015610.1 mouse_genomes_project 5 112613105 112619469 - Gm15787 processed_transcript antisense MGP_129S1SvImJ_T0099954.1 MGP_129S1SvImJ_G0038021.1 mouse_genomes_project 5 109321264 109321366 + Gm22557 snRNA snRNA MGP_129S1SvImJ_T0098953.1 MGP_129S1SvImJ_G0037031.1 mouse_genomes_project 5 42510090 42511365 + Gm16014 sense_intronic sense_intronic MGP_129S1SvImJ_T0098969.1 MGP_129S1SvImJ_G0037046.1 mouse_genomes_project 5 138676862 138677278 - Gm43480 sense_intronic sense_intronic MGP_129S1SvImJ_T0004765.1 MGP_129S1SvImJ_G0004121.1 mouse_genomes_project 5 101426226 101427276 + Gm17092 antisense antisense MGP_129S1SvImJ_T0099911.1 MGP_129S1SvImJ_G0037978.1 mouse_genomes_project 5 31056317 31056417 + Gm24003 snRNA snRNA MGP_129S1SvImJ_T0015137.1 MGP_129S1SvImJ_G0013226.1 mouse_genomes_project 5 111052711 111264581 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008270.1 MGP_129S1SvImJ_G0006739.1 mouse_genomes_project 5 109042035 109050667 + Gm43419 lincRNA lincRNA MGP_129S1SvImJ_T0008087.1 MGP_129S1SvImJ_G0006600.1 mouse_genomes_project 5 26369893 26387619 + Gm26894 lincRNA lincRNA MGP_129S1SvImJ_T0001568.1 MGP_129S1SvImJ_G0001486.1 mouse_genomes_project 5 44484665 44486856 - TEC TEC MGP_129S1SvImJ_T0008305.1 MGP_129S1SvImJ_G0006759.1 mouse_genomes_project 5 114782038 114800128 - Miat lincRNA lincRNA MGP_129S1SvImJ_T0008306.1 MGP_129S1SvImJ_G0006759.1 mouse_genomes_project 5 114782040 114799681 - Miat lincRNA lincRNA MGP_129S1SvImJ_T0008308.1 MGP_129S1SvImJ_G0006759.1 mouse_genomes_project 5 114790189 114799377 - Miat lincRNA lincRNA MGP_129S1SvImJ_T0008309.1 MGP_129S1SvImJ_G0006759.1 mouse_genomes_project 5 114790480 114799662 - Miat lincRNA lincRNA MGP_129S1SvImJ_T0008310.1 MGP_129S1SvImJ_G0006759.1 mouse_genomes_project 5 114790678 114799408 - Miat lincRNA lincRNA MGP_129S1SvImJ_T0008311.1 MGP_129S1SvImJ_G0006759.1 mouse_genomes_project 5 114798838 114799374 - Miat lincRNA lincRNA MGP_129S1SvImJ_T0072973.1 MGP_129S1SvImJ_G0029822.1 mouse_genomes_project 5 107213235 107256583 - MGP_129S1SvImJ_P0072973 protein_coding protein_coding MGP_129S1SvImJ_T0004899.1 MGP_129S1SvImJ_G0004214.1 mouse_genomes_project 5 146769970 146784707 - Gm16036 antisense antisense MGP_129S1SvImJ_T0070151.1 MGP_129S1SvImJ_G0029286.1 mouse_genomes_project 5 5632431 5735233 + MGP_129S1SvImJ_P0070151 Abcb1a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0070152.1 MGP_129S1SvImJ_G0029286.1 mouse_genomes_project 5 5632450 5729430 + MGP_129S1SvImJ_P0070152 Abcb1a protein_coding protein_coding MGP_129S1SvImJ_T0070153.1 MGP_129S1SvImJ_G0029286.1 mouse_genomes_project 5 5697502 5729425 + Abcb1a protein_coding retained_intron MGP_129S1SvImJ_T0070154.1 MGP_129S1SvImJ_G0029286.1 mouse_genomes_project 5 5697532 5700858 + Abcb1a protein_coding processed_transcript MGP_129S1SvImJ_T0074692.1 MGP_129S1SvImJ_G0030143.1 mouse_genomes_project 5 134337229 134350874 + MGP_129S1SvImJ_P0074692 Tmem248 protein_coding protein_coding MGP_129S1SvImJ_T0074693.1 MGP_129S1SvImJ_G0030143.1 mouse_genomes_project 5 134339892 134366350 + MGP_129S1SvImJ_P0074693 Tmem248 protein_coding protein_coding MGP_129S1SvImJ_T0074694.1 MGP_129S1SvImJ_G0030143.1 mouse_genomes_project 5 134339892 134354754 + MGP_129S1SvImJ_P0074694 Tmem248 protein_coding protein_coding MGP_129S1SvImJ_T0074695.1 MGP_129S1SvImJ_G0030143.1 mouse_genomes_project 5 134339988 134354630 + MGP_129S1SvImJ_P0074695 Tmem248 protein_coding protein_coding MGP_129S1SvImJ_T0074696.1 MGP_129S1SvImJ_G0030143.1 mouse_genomes_project 5 134342483 134366251 + MGP_129S1SvImJ_P0074696 Tmem248 protein_coding protein_coding MGP_129S1SvImJ_T0014910.1 MGP_129S1SvImJ_G0012999.1 mouse_genomes_project 5 19882254 19882624 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072682.1 MGP_129S1SvImJ_G0029755.1 mouse_genomes_project 5 93801040 93807146 - Ccdc158 protein_coding retained_intron MGP_129S1SvImJ_T0072683.1 MGP_129S1SvImJ_G0029755.1 mouse_genomes_project 5 93801339 93866887 - MGP_129S1SvImJ_P0072683 Ccdc158 protein_coding protein_coding MGP_129S1SvImJ_T0072684.1 MGP_129S1SvImJ_G0029755.1 mouse_genomes_project 5 93842850 93867027 - MGP_129S1SvImJ_P0072684 Ccdc158 protein_coding protein_coding MGP_129S1SvImJ_T0072685.1 MGP_129S1SvImJ_G0029755.1 mouse_genomes_project 5 93842850 93867033 - MGP_129S1SvImJ_P0072685 Ccdc158 protein_coding protein_coding MGP_129S1SvImJ_T0015033.1 MGP_129S1SvImJ_G0013122.1 mouse_genomes_project 5 66086850 66087118 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070012.1 MGP_129S1SvImJ_G0029266.1 mouse_genomes_project 5 757059 785304 + Akap9 protein_coding retained_intron MGP_129S1SvImJ_T0070013.1 MGP_129S1SvImJ_G0029266.1 mouse_genomes_project 5 757183 791507 + MGP_129S1SvImJ_P0070013 Akap9 protein_coding protein_coding MGP_129S1SvImJ_T0070014.1 MGP_129S1SvImJ_G0029266.1 mouse_genomes_project 5 757279 779464 + Akap9 protein_coding retained_intron MGP_129S1SvImJ_T0070015.1 MGP_129S1SvImJ_G0029266.1 mouse_genomes_project 5 757279 906447 + MGP_129S1SvImJ_P0070015 Akap9 protein_coding protein_coding MGP_129S1SvImJ_T0070016.1 MGP_129S1SvImJ_G0029266.1 mouse_genomes_project 5 757448 904833 + MGP_129S1SvImJ_P0070016 Akap9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0070017.1 MGP_129S1SvImJ_G0029266.1 mouse_genomes_project 5 757448 876455 + MGP_129S1SvImJ_P0070017 Akap9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0070018.1 MGP_129S1SvImJ_G0029266.1 mouse_genomes_project 5 781778 788194 + Akap9 protein_coding processed_transcript MGP_129S1SvImJ_T0070019.1 MGP_129S1SvImJ_G0029266.1 mouse_genomes_project 5 781789 782370 + Akap9 protein_coding retained_intron MGP_129S1SvImJ_T0070020.1 MGP_129S1SvImJ_G0029266.1 mouse_genomes_project 5 785253 788250 + Akap9 protein_coding retained_intron MGP_129S1SvImJ_T0070021.1 MGP_129S1SvImJ_G0029266.1 mouse_genomes_project 5 803524 813110 + Akap9 protein_coding retained_intron MGP_129S1SvImJ_T0070022.1 MGP_129S1SvImJ_G0029266.1 mouse_genomes_project 5 807166 808082 + MGP_129S1SvImJ_P0070022 Akap9 protein_coding protein_coding MGP_129S1SvImJ_T0070023.1 MGP_129S1SvImJ_G0029266.1 mouse_genomes_project 5 859070 861233 + Akap9 protein_coding retained_intron MGP_129S1SvImJ_T0070024.1 MGP_129S1SvImJ_G0029266.1 mouse_genomes_project 5 884356 886032 + Akap9 protein_coding retained_intron MGP_129S1SvImJ_T0070025.1 MGP_129S1SvImJ_G0029266.1 mouse_genomes_project 5 889485 890488 + MGP_129S1SvImJ_P0070025 Akap9 protein_coding protein_coding MGP_129S1SvImJ_T0070026.1 MGP_129S1SvImJ_G0029266.1 mouse_genomes_project 5 889607 890086 + Akap9 protein_coding retained_intron MGP_129S1SvImJ_T0070027.1 MGP_129S1SvImJ_G0029266.1 mouse_genomes_project 5 890407 895557 + MGP_129S1SvImJ_P0070027 Akap9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070028.1 MGP_129S1SvImJ_G0029266.1 mouse_genomes_project 5 892596 893070 + Akap9 protein_coding retained_intron MGP_129S1SvImJ_T0071211.1 MGP_129S1SvImJ_G0029470.1 mouse_genomes_project 5 32909506 33006369 + MGP_129S1SvImJ_P0071211 Grk4 protein_coding protein_coding MGP_129S1SvImJ_T0071212.1 MGP_129S1SvImJ_G0029470.1 mouse_genomes_project 5 32910102 32925154 + MGP_129S1SvImJ_P0071212 Grk4 protein_coding protein_coding MGP_129S1SvImJ_T0071213.1 MGP_129S1SvImJ_G0029470.1 mouse_genomes_project 5 32961071 32995294 + Grk4 protein_coding processed_transcript MGP_129S1SvImJ_T0071214.1 MGP_129S1SvImJ_G0029470.1 mouse_genomes_project 5 32994399 33006371 + Grk4 protein_coding processed_transcript MGP_129S1SvImJ_T0071278.1 MGP_129S1SvImJ_G0029482.1 mouse_genomes_project 5 33949131 33979799 - MGP_129S1SvImJ_P0071278 Htra3 protein_coding protein_coding MGP_129S1SvImJ_T0071279.1 MGP_129S1SvImJ_G0029482.1 mouse_genomes_project 5 33950116 33979510 - MGP_129S1SvImJ_P0071279 Htra3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071280.1 MGP_129S1SvImJ_G0029482.1 mouse_genomes_project 5 33961984 33979888 - MGP_129S1SvImJ_P0071280 Htra3 protein_coding protein_coding MGP_129S1SvImJ_T0071281.1 MGP_129S1SvImJ_G0029482.1 mouse_genomes_project 5 33968618 33971978 - MGP_129S1SvImJ_P0071281 Htra3 protein_coding protein_coding MGP_129S1SvImJ_T0071282.1 MGP_129S1SvImJ_G0029482.1 mouse_genomes_project 5 33978798 33979878 - Htra3 protein_coding retained_intron MGP_129S1SvImJ_T0018233.1 MGP_129S1SvImJ_G0015617.1 mouse_genomes_project 5 154742073 154749958 - 1810059H22Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018234.1 MGP_129S1SvImJ_G0015617.1 mouse_genomes_project 5 154742969 154744822 - 1810059H22Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018235.1 MGP_129S1SvImJ_G0015617.1 mouse_genomes_project 5 154746862 154749452 - 1810059H22Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018236.1 MGP_129S1SvImJ_G0015617.1 mouse_genomes_project 5 154746934 154761064 - 1810059H22Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018237.1 MGP_129S1SvImJ_G0015617.1 mouse_genomes_project 5 154747153 154749428 - 1810059H22Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018238.1 MGP_129S1SvImJ_G0015617.1 mouse_genomes_project 5 154747396 154755459 - 1810059H22Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018239.1 MGP_129S1SvImJ_G0015617.1 mouse_genomes_project 5 154755126 154761078 - 1810059H22Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018240.1 MGP_129S1SvImJ_G0015617.1 mouse_genomes_project 5 154755945 154761304 - 1810059H22Rik processed_transcript lincRNA MGP_129S1SvImJ_T0008128.1 MGP_129S1SvImJ_G0006626.1 mouse_genomes_project 5 41970913 41981324 - lincRNA lincRNA MGP_129S1SvImJ_T0074981.1 MGP_129S1SvImJ_G0030192.1 mouse_genomes_project 5 140485833 140487595 + MGP_129S1SvImJ_P0074981 Hspb1 protein_coding protein_coding MGP_129S1SvImJ_T0074982.1 MGP_129S1SvImJ_G0030192.1 mouse_genomes_project 5 140485932 140487593 + MGP_129S1SvImJ_P0074982 Hspb1 protein_coding protein_coding MGP_129S1SvImJ_T0008335.1 MGP_129S1SvImJ_G0006777.1 mouse_genomes_project 5 119383049 119385172 - 4930562A09Rik lincRNA lincRNA MGP_129S1SvImJ_T0075876.1 MGP_129S1SvImJ_G0030375.1 mouse_genomes_project 5 151794414 151858138 + MGP_129S1SvImJ_P0075876 protein_coding protein_coding MGP_129S1SvImJ_T0075877.1 MGP_129S1SvImJ_G0030375.1 mouse_genomes_project 5 151794511 151837054 + MGP_129S1SvImJ_P0075877 protein_coding protein_coding MGP_129S1SvImJ_T0075878.1 MGP_129S1SvImJ_G0030375.1 mouse_genomes_project 5 151794819 151867814 + MGP_129S1SvImJ_P0075878 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0075879.1 MGP_129S1SvImJ_G0030375.1 mouse_genomes_project 5 151820956 151823160 + protein_coding retained_intron MGP_129S1SvImJ_T0075880.1 MGP_129S1SvImJ_G0030375.1 mouse_genomes_project 5 151851529 151857562 + protein_coding processed_transcript MGP_129S1SvImJ_T0075881.1 MGP_129S1SvImJ_G0030375.1 mouse_genomes_project 5 151861758 151864906 + protein_coding retained_intron MGP_129S1SvImJ_T0018245.1 MGP_129S1SvImJ_G0015620.1 mouse_genomes_project 5 155733013 155749563 + 4930500F04Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018246.1 MGP_129S1SvImJ_G0015620.1 mouse_genomes_project 5 155733231 155749559 + 4930500F04Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018247.1 MGP_129S1SvImJ_G0015620.1 mouse_genomes_project 5 155737569 155739676 + 4930500F04Rik processed_transcript retained_intron MGP_129S1SvImJ_T0099959.1 MGP_129S1SvImJ_G0038026.1 mouse_genomes_project 5 118382610 118382751 + Gm24265 snRNA snRNA MGP_129S1SvImJ_T0074871.1 MGP_129S1SvImJ_G0030171.1 mouse_genomes_project 5 139550094 139561802 - MGP_129S1SvImJ_P0074871 Wbscr22 protein_coding protein_coding MGP_129S1SvImJ_T0074872.1 MGP_129S1SvImJ_G0030171.1 mouse_genomes_project 5 139550094 139554065 - MGP_129S1SvImJ_P0074872 Wbscr22 protein_coding protein_coding MGP_129S1SvImJ_T0074873.1 MGP_129S1SvImJ_G0030171.1 mouse_genomes_project 5 139550096 139562095 - MGP_129S1SvImJ_P0074873 Wbscr22 protein_coding protein_coding MGP_129S1SvImJ_T0074874.1 MGP_129S1SvImJ_G0030171.1 mouse_genomes_project 5 139550096 139561214 - MGP_129S1SvImJ_P0074874 Wbscr22 protein_coding protein_coding MGP_129S1SvImJ_T0074875.1 MGP_129S1SvImJ_G0030171.1 mouse_genomes_project 5 139550422 139561175 - MGP_129S1SvImJ_P0074875 Wbscr22 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074876.1 MGP_129S1SvImJ_G0030171.1 mouse_genomes_project 5 139550424 139553865 - Wbscr22 protein_coding retained_intron MGP_129S1SvImJ_T0074877.1 MGP_129S1SvImJ_G0030171.1 mouse_genomes_project 5 139550470 139554157 - Wbscr22 protein_coding retained_intron MGP_129S1SvImJ_T0074878.1 MGP_129S1SvImJ_G0030171.1 mouse_genomes_project 5 139550750 139554051 - Wbscr22 protein_coding retained_intron MGP_129S1SvImJ_T0074879.1 MGP_129S1SvImJ_G0030171.1 mouse_genomes_project 5 139553186 139558607 - Wbscr22 protein_coding processed_transcript MGP_129S1SvImJ_T0074880.1 MGP_129S1SvImJ_G0030171.1 mouse_genomes_project 5 139553617 139561184 - Wbscr22 protein_coding retained_intron MGP_129S1SvImJ_T0074881.1 MGP_129S1SvImJ_G0030171.1 mouse_genomes_project 5 139554023 139558479 - Wbscr22 protein_coding retained_intron MGP_129S1SvImJ_T0074882.1 MGP_129S1SvImJ_G0030171.1 mouse_genomes_project 5 139556332 139560900 - MGP_129S1SvImJ_P0074882 Wbscr22 protein_coding protein_coding MGP_129S1SvImJ_T0074883.1 MGP_129S1SvImJ_G0030171.1 mouse_genomes_project 5 139558398 139561226 - MGP_129S1SvImJ_P0074883 Wbscr22 protein_coding protein_coding MGP_129S1SvImJ_T0074884.1 MGP_129S1SvImJ_G0030171.1 mouse_genomes_project 5 139560874 139561215 - Wbscr22 protein_coding processed_transcript MGP_129S1SvImJ_T0074885.1 MGP_129S1SvImJ_G0030171.1 mouse_genomes_project 5 139561292 139561785 - MGP_129S1SvImJ_P0074885 Wbscr22 protein_coding protein_coding MGP_129S1SvImJ_T0008179.1 MGP_129S1SvImJ_G0006668.1 mouse_genomes_project 5 74834657 74837596 - Gm15985 lincRNA lincRNA MGP_129S1SvImJ_T0074357.1 MGP_129S1SvImJ_G0030084.1 mouse_genomes_project 5 127705489 127745306 + MGP_129S1SvImJ_P0074357 Ccdc62 protein_coding protein_coding MGP_129S1SvImJ_T0074358.1 MGP_129S1SvImJ_G0030084.1 mouse_genomes_project 5 127705499 127711152 + Ccdc62 protein_coding retained_intron MGP_129S1SvImJ_T0074359.1 MGP_129S1SvImJ_G0030084.1 mouse_genomes_project 5 127705499 127745306 + MGP_129S1SvImJ_P0074359 Ccdc62 protein_coding protein_coding MGP_129S1SvImJ_T0074360.1 MGP_129S1SvImJ_G0030084.1 mouse_genomes_project 5 127705509 127744339 + MGP_129S1SvImJ_P0074360 Ccdc62 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0074361.1 MGP_129S1SvImJ_G0030084.1 mouse_genomes_project 5 127720068 127728235 + Ccdc62 protein_coding processed_transcript MGP_129S1SvImJ_T0074362.1 MGP_129S1SvImJ_G0030084.1 mouse_genomes_project 5 127728212 127731330 + Ccdc62 protein_coding retained_intron MGP_129S1SvImJ_T0074363.1 MGP_129S1SvImJ_G0030084.1 mouse_genomes_project 5 127736367 127741966 + Ccdc62 protein_coding retained_intron MGP_129S1SvImJ_T0074749.1 MGP_129S1SvImJ_G0030154.1 mouse_genomes_project 5 138591391 138600656 - MGP_129S1SvImJ_P0074749 Ncf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074750.1 MGP_129S1SvImJ_G0030154.1 mouse_genomes_project 5 138591598 138600656 - MGP_129S1SvImJ_P0074750 Ncf1 protein_coding protein_coding MGP_129S1SvImJ_T0074751.1 MGP_129S1SvImJ_G0030154.1 mouse_genomes_project 5 138591598 138600656 - MGP_129S1SvImJ_P0074751 Ncf1 protein_coding protein_coding MGP_129S1SvImJ_T0074752.1 MGP_129S1SvImJ_G0030154.1 mouse_genomes_project 5 138591598 138600656 - MGP_129S1SvImJ_P0074752 Ncf1 protein_coding protein_coding MGP_129S1SvImJ_T0074753.1 MGP_129S1SvImJ_G0030154.1 mouse_genomes_project 5 138592710 138593561 - Ncf1 protein_coding retained_intron MGP_129S1SvImJ_T0074754.1 MGP_129S1SvImJ_G0030154.1 mouse_genomes_project 5 138594783 138599738 - Ncf1 protein_coding retained_intron MGP_129S1SvImJ_T0074755.1 MGP_129S1SvImJ_G0030154.1 mouse_genomes_project 5 138597055 138599149 - Ncf1 protein_coding retained_intron MGP_129S1SvImJ_T0008450.1 MGP_129S1SvImJ_G0006856.1 mouse_genomes_project 5 152317440 152318315 + 4930573C15Rik lincRNA lincRNA MGP_129S1SvImJ_T0014907.1 MGP_129S1SvImJ_G0012996.1 mouse_genomes_project 5 19475793 19476078 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001555.1 MGP_129S1SvImJ_G0001473.1 mouse_genomes_project 5 43144040 43147296 - TEC TEC MGP_129S1SvImJ_T0008127.1 MGP_129S1SvImJ_G0006625.1 mouse_genomes_project 5 41661055 41665380 - Gm42711 lincRNA lincRNA MGP_129S1SvImJ_T0008325.1 MGP_129S1SvImJ_G0006769.1 mouse_genomes_project 5 118201032 118204957 + Gm42903 lincRNA lincRNA MGP_129S1SvImJ_T0074664.1 MGP_129S1SvImJ_G0030138.1 mouse_genomes_project 5 134119482 134132908 - MGP_129S1SvImJ_P0074664 Asl protein_coding protein_coding MGP_129S1SvImJ_T0074665.1 MGP_129S1SvImJ_G0030138.1 mouse_genomes_project 5 134119718 134122947 - MGP_129S1SvImJ_P0074665 Asl protein_coding protein_coding MGP_129S1SvImJ_T0074666.1 MGP_129S1SvImJ_G0030138.1 mouse_genomes_project 5 134119719 134138772 - MGP_129S1SvImJ_P0074666 Asl protein_coding protein_coding MGP_129S1SvImJ_T0074667.1 MGP_129S1SvImJ_G0030138.1 mouse_genomes_project 5 134119728 134134566 - MGP_129S1SvImJ_P0074667 Asl protein_coding protein_coding MGP_129S1SvImJ_T0074668.1 MGP_129S1SvImJ_G0030138.1 mouse_genomes_project 5 134121671 134132827 - MGP_129S1SvImJ_P0074668 Asl protein_coding protein_coding MGP_129S1SvImJ_T0074669.1 MGP_129S1SvImJ_G0030138.1 mouse_genomes_project 5 134124978 134132900 - Asl protein_coding processed_transcript MGP_129S1SvImJ_T0074670.1 MGP_129S1SvImJ_G0030138.1 mouse_genomes_project 5 134127894 134132844 - MGP_129S1SvImJ_P0074670 Asl protein_coding protein_coding MGP_129S1SvImJ_T0074671.1 MGP_129S1SvImJ_G0030138.1 mouse_genomes_project 5 134130471 134132872 - Asl protein_coding retained_intron MGP_129S1SvImJ_T0015016.1 MGP_129S1SvImJ_G0013105.1 mouse_genomes_project 5 60147878 60149670 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0074170.1 MGP_129S1SvImJ_G0030057.1 mouse_genomes_project 5 126381314 126401953 - MGP_129S1SvImJ_P0074170 Camkk2 protein_coding protein_coding MGP_129S1SvImJ_T0074171.1 MGP_129S1SvImJ_G0030057.1 mouse_genomes_project 5 126381936 126392203 - MGP_129S1SvImJ_P0074171 Camkk2 protein_coding protein_coding MGP_129S1SvImJ_T0074172.1 MGP_129S1SvImJ_G0030057.1 mouse_genomes_project 5 126382183 126427479 - MGP_129S1SvImJ_P0074172 Camkk2 protein_coding protein_coding MGP_129S1SvImJ_T0074173.1 MGP_129S1SvImJ_G0030057.1 mouse_genomes_project 5 126388729 126427549 - Camkk2 protein_coding retained_intron MGP_129S1SvImJ_T0074174.1 MGP_129S1SvImJ_G0030057.1 mouse_genomes_project 5 126394553 126412074 - MGP_129S1SvImJ_P0074174 Camkk2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074175.1 MGP_129S1SvImJ_G0030057.1 mouse_genomes_project 5 126396141 126427485 - Camkk2 protein_coding processed_transcript MGP_129S1SvImJ_T0074176.1 MGP_129S1SvImJ_G0030057.1 mouse_genomes_project 5 126401918 126427431 - MGP_129S1SvImJ_P0074176 Camkk2 protein_coding protein_coding MGP_129S1SvImJ_T0074177.1 MGP_129S1SvImJ_G0030057.1 mouse_genomes_project 5 126404484 126427475 - MGP_129S1SvImJ_P0074177 Camkk2 protein_coding protein_coding MGP_129S1SvImJ_T0074178.1 MGP_129S1SvImJ_G0030057.1 mouse_genomes_project 5 126405751 126427559 - Camkk2 protein_coding retained_intron MGP_129S1SvImJ_T0074179.1 MGP_129S1SvImJ_G0030057.1 mouse_genomes_project 5 126412214 126427465 - MGP_129S1SvImJ_P0074179 Camkk2 protein_coding protein_coding MGP_129S1SvImJ_T0014937.1 MGP_129S1SvImJ_G0013026.1 mouse_genomes_project 5 25695918 25696399 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008371.1 MGP_129S1SvImJ_G0006801.1 mouse_genomes_project 5 126825519 126828158 + 4932422M17Rik lincRNA lincRNA MGP_129S1SvImJ_T0074321.1 MGP_129S1SvImJ_G0030078.1 mouse_genomes_project 5 127486043 127501941 - MGP_129S1SvImJ_P0074321 Rsrc2 protein_coding protein_coding MGP_129S1SvImJ_T0074322.1 MGP_129S1SvImJ_G0030078.1 mouse_genomes_project 5 127486345 127501988 - Rsrc2 protein_coding processed_transcript MGP_129S1SvImJ_T0074323.1 MGP_129S1SvImJ_G0030078.1 mouse_genomes_project 5 127486628 127510094 - MGP_129S1SvImJ_P0074323 Rsrc2 protein_coding protein_coding MGP_129S1SvImJ_T0074324.1 MGP_129S1SvImJ_G0030078.1 mouse_genomes_project 5 127486639 127510060 - MGP_129S1SvImJ_P0074324 Rsrc2 protein_coding protein_coding MGP_129S1SvImJ_T0074325.1 MGP_129S1SvImJ_G0030078.1 mouse_genomes_project 5 127486705 127502013 - MGP_129S1SvImJ_P0074325 Rsrc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074326.1 MGP_129S1SvImJ_G0030078.1 mouse_genomes_project 5 127486705 127502803 - MGP_129S1SvImJ_P0074326 Rsrc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074327.1 MGP_129S1SvImJ_G0030078.1 mouse_genomes_project 5 127486705 127502803 - MGP_129S1SvImJ_P0074327 Rsrc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074328.1 MGP_129S1SvImJ_G0030078.1 mouse_genomes_project 5 127486868 127492481 - Rsrc2 protein_coding retained_intron MGP_129S1SvImJ_T0074329.1 MGP_129S1SvImJ_G0030078.1 mouse_genomes_project 5 127488156 127510066 - MGP_129S1SvImJ_P0074329 Rsrc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074330.1 MGP_129S1SvImJ_G0030078.1 mouse_genomes_project 5 127492155 127510092 - MGP_129S1SvImJ_P0074330 Rsrc2 protein_coding protein_coding MGP_129S1SvImJ_T0074331.1 MGP_129S1SvImJ_G0030078.1 mouse_genomes_project 5 127492389 127510061 - MGP_129S1SvImJ_P0074331 Rsrc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074332.1 MGP_129S1SvImJ_G0030078.1 mouse_genomes_project 5 127492389 127510062 - MGP_129S1SvImJ_P0074332 Rsrc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074333.1 MGP_129S1SvImJ_G0030078.1 mouse_genomes_project 5 127493620 127504726 - Rsrc2 protein_coding retained_intron MGP_129S1SvImJ_T0074334.1 MGP_129S1SvImJ_G0030078.1 mouse_genomes_project 5 127493675 127500509 - Rsrc2 protein_coding retained_intron MGP_129S1SvImJ_T0074335.1 MGP_129S1SvImJ_G0030078.1 mouse_genomes_project 5 127495404 127510051 - MGP_129S1SvImJ_P0074335 Rsrc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074336.1 MGP_129S1SvImJ_G0030078.1 mouse_genomes_project 5 127495451 127510092 - MGP_129S1SvImJ_P0074336 Rsrc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074337.1 MGP_129S1SvImJ_G0030078.1 mouse_genomes_project 5 127498455 127510049 - MGP_129S1SvImJ_P0074337 Rsrc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074338.1 MGP_129S1SvImJ_G0030078.1 mouse_genomes_project 5 127499584 127510047 - Rsrc2 protein_coding processed_transcript MGP_129S1SvImJ_T0074339.1 MGP_129S1SvImJ_G0030078.1 mouse_genomes_project 5 127501133 127510061 - Rsrc2 protein_coding retained_intron MGP_129S1SvImJ_T0074340.1 MGP_129S1SvImJ_G0030078.1 mouse_genomes_project 5 127501133 127510061 - Rsrc2 protein_coding retained_intron MGP_129S1SvImJ_T0074341.1 MGP_129S1SvImJ_G0030078.1 mouse_genomes_project 5 127502726 127504387 - Rsrc2 protein_coding retained_intron MGP_129S1SvImJ_T0001523.1 MGP_129S1SvImJ_G0001441.1 mouse_genomes_project 5 31135147 31136396 + TEC TEC MGP_129S1SvImJ_T0008186.1 MGP_129S1SvImJ_G0006674.1 mouse_genomes_project 5 75909091 75914422 - Gm43100 lincRNA lincRNA MGP_129S1SvImJ_T0001689.1 MGP_129S1SvImJ_G0001605.1 mouse_genomes_project 5 67768367 67772057 + TEC TEC MGP_129S1SvImJ_T0071084.1 MGP_129S1SvImJ_G0029453.1 mouse_genomes_project 5 31935450 31980551 - MGP_129S1SvImJ_P0071084 Letm1 protein_coding protein_coding MGP_129S1SvImJ_T0071085.1 MGP_129S1SvImJ_G0029453.1 mouse_genomes_project 5 31938311 31950820 - Letm1 protein_coding retained_intron MGP_129S1SvImJ_T0071086.1 MGP_129S1SvImJ_G0029453.1 mouse_genomes_project 5 31959430 31976378 - MGP_129S1SvImJ_P0071086 Letm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071087.1 MGP_129S1SvImJ_G0029453.1 mouse_genomes_project 5 31967092 31980448 - Letm1 protein_coding processed_transcript MGP_129S1SvImJ_T0071088.1 MGP_129S1SvImJ_G0029453.1 mouse_genomes_project 5 31967291 31968184 - Letm1 protein_coding processed_transcript MGP_129S1SvImJ_T0071089.1 MGP_129S1SvImJ_G0029453.1 mouse_genomes_project 5 31974188 31980471 - MGP_129S1SvImJ_P0071089 Letm1 protein_coding protein_coding MGP_129S1SvImJ_T0008209.1 MGP_129S1SvImJ_G0006693.1 mouse_genomes_project 5 92008002 92010173 + Gm42530 lincRNA lincRNA MGP_129S1SvImJ_T0098964.1 MGP_129S1SvImJ_G0037042.1 mouse_genomes_project 5 126040139 126042746 + Gm42829 sense_intronic sense_intronic MGP_129S1SvImJ_T0008157.1 MGP_129S1SvImJ_G0006653.1 mouse_genomes_project 5 64021323 64064149 + Gm31363 lincRNA lincRNA MGP_129S1SvImJ_T0072290.1 MGP_129S1SvImJ_G0029654.1 mouse_genomes_project 5 77306817 77319385 - MGP_129S1SvImJ_P0072290 Hopx protein_coding protein_coding MGP_129S1SvImJ_T0072291.1 MGP_129S1SvImJ_G0029654.1 mouse_genomes_project 5 77306817 77340608 - MGP_129S1SvImJ_P0072291 Hopx protein_coding protein_coding MGP_129S1SvImJ_T0072292.1 MGP_129S1SvImJ_G0029654.1 mouse_genomes_project 5 77306817 77319361 - MGP_129S1SvImJ_P0072292 Hopx protein_coding protein_coding MGP_129S1SvImJ_T0102574.1 MGP_129S1SvImJ_G0040407.1 mouse_genomes_project 5 111696891 111702700 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0001586.1 MGP_129S1SvImJ_G0001503.1 mouse_genomes_project 5 47782805 47784754 - TEC TEC MGP_129S1SvImJ_T0015220.1 MGP_129S1SvImJ_G0013309.1 mouse_genomes_project 5 150110957 150111128 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075763.1 MGP_129S1SvImJ_G0030349.1 mouse_genomes_project 5 149597041 149697455 - MGP_129S1SvImJ_P0075763 Baiap2l1 protein_coding protein_coding MGP_129S1SvImJ_T0075764.1 MGP_129S1SvImJ_G0030349.1 mouse_genomes_project 5 149614395 149621325 - Baiap2l1 protein_coding processed_transcript MGP_129S1SvImJ_T0073202.1 MGP_129S1SvImJ_G0029870.1 mouse_genomes_project 5 111381222 111399862 - MGP_129S1SvImJ_P0073202 protein_coding protein_coding MGP_129S1SvImJ_T0015002.1 MGP_129S1SvImJ_G0013091.1 mouse_genomes_project 5 55349897 55350210 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015132.1 MGP_129S1SvImJ_G0013221.1 mouse_genomes_project 5 110118796 110119218 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015108.1 MGP_129S1SvImJ_G0013197.1 mouse_genomes_project 5 103756000 103759796 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001768.1 MGP_129S1SvImJ_G0001683.1 mouse_genomes_project 5 109163007 109165090 - TEC TEC MGP_129S1SvImJ_T0001580.1 MGP_129S1SvImJ_G0001498.1 mouse_genomes_project 5 47610224 47612488 - TEC TEC MGP_129S1SvImJ_T0001565.1 MGP_129S1SvImJ_G0001483.1 mouse_genomes_project 5 44381523 44382530 - TEC TEC MGP_129S1SvImJ_T0072116.1 MGP_129S1SvImJ_G0029624.1 mouse_genomes_project 5 73315419 73332058 - MGP_129S1SvImJ_P0072116 Ociad2 protein_coding protein_coding MGP_129S1SvImJ_T0072117.1 MGP_129S1SvImJ_G0029624.1 mouse_genomes_project 5 73315421 73332153 - MGP_129S1SvImJ_P0072117 Ociad2 protein_coding protein_coding MGP_129S1SvImJ_T0072118.1 MGP_129S1SvImJ_G0029624.1 mouse_genomes_project 5 73315421 73332150 - MGP_129S1SvImJ_P0072118 Ociad2 protein_coding protein_coding MGP_129S1SvImJ_T0072119.1 MGP_129S1SvImJ_G0029624.1 mouse_genomes_project 5 73320868 73334231 - MGP_129S1SvImJ_P0072119 Ociad2 protein_coding protein_coding MGP_129S1SvImJ_T0071499.1 MGP_129S1SvImJ_G0029522.1 mouse_genomes_project 5 42143412 42245932 + MGP_129S1SvImJ_P0071499 C1qtnf7 protein_coding protein_coding MGP_129S1SvImJ_T0071500.1 MGP_129S1SvImJ_G0029522.1 mouse_genomes_project 5 42143636 42236863 + MGP_129S1SvImJ_P0071500 C1qtnf7 protein_coding protein_coding MGP_129S1SvImJ_T0071501.1 MGP_129S1SvImJ_G0029522.1 mouse_genomes_project 5 42229512 42243715 + MGP_129S1SvImJ_P0071501 C1qtnf7 protein_coding protein_coding MGP_129S1SvImJ_T0072989.1 MGP_129S1SvImJ_G0029828.1 mouse_genomes_project 5 107796888 107837537 + MGP_129S1SvImJ_P0072989 Zfp326 protein_coding protein_coding MGP_129S1SvImJ_T0072990.1 MGP_129S1SvImJ_G0029828.1 mouse_genomes_project 5 107796891 107838575 + Zfp326 protein_coding retained_intron MGP_129S1SvImJ_T0072991.1 MGP_129S1SvImJ_G0029828.1 mouse_genomes_project 5 107796891 107810788 + Zfp326 protein_coding retained_intron MGP_129S1SvImJ_T0072992.1 MGP_129S1SvImJ_G0029828.1 mouse_genomes_project 5 107796891 107838575 + MGP_129S1SvImJ_P0072992 Zfp326 protein_coding protein_coding MGP_129S1SvImJ_T0072993.1 MGP_129S1SvImJ_G0029828.1 mouse_genomes_project 5 107796899 107837934 + MGP_129S1SvImJ_P0072993 Zfp326 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072994.1 MGP_129S1SvImJ_G0029828.1 mouse_genomes_project 5 107797264 107808951 + Zfp326 protein_coding processed_transcript MGP_129S1SvImJ_T0072995.1 MGP_129S1SvImJ_G0029828.1 mouse_genomes_project 5 107799093 107830331 + Zfp326 protein_coding retained_intron MGP_129S1SvImJ_T0072996.1 MGP_129S1SvImJ_G0029828.1 mouse_genomes_project 5 107813700 107819262 + Zfp326 protein_coding retained_intron MGP_129S1SvImJ_T0072997.1 MGP_129S1SvImJ_G0029828.1 mouse_genomes_project 5 107827670 107830744 + Zfp326 protein_coding retained_intron MGP_129S1SvImJ_T0074111.1 MGP_129S1SvImJ_G0030048.1 mouse_genomes_project 5 125989705 125998424 + MGP_129S1SvImJ_P0074111 Vps29 protein_coding protein_coding MGP_129S1SvImJ_T0074112.1 MGP_129S1SvImJ_G0030048.1 mouse_genomes_project 5 125989726 125997630 + MGP_129S1SvImJ_P0074112 Vps29 protein_coding protein_coding MGP_129S1SvImJ_T0074113.1 MGP_129S1SvImJ_G0030048.1 mouse_genomes_project 5 125989729 125997375 + Vps29 protein_coding processed_transcript MGP_129S1SvImJ_T0074114.1 MGP_129S1SvImJ_G0030048.1 mouse_genomes_project 5 125989729 125999302 + MGP_129S1SvImJ_P0074114 Vps29 protein_coding protein_coding MGP_129S1SvImJ_T0074115.1 MGP_129S1SvImJ_G0030048.1 mouse_genomes_project 5 125989742 125998349 + MGP_129S1SvImJ_P0074115 Vps29 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074116.1 MGP_129S1SvImJ_G0030048.1 mouse_genomes_project 5 125989760 125997324 + MGP_129S1SvImJ_P0074116 Vps29 protein_coding protein_coding MGP_129S1SvImJ_T0074117.1 MGP_129S1SvImJ_G0030048.1 mouse_genomes_project 5 125989780 125997406 + MGP_129S1SvImJ_P0074117 Vps29 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074118.1 MGP_129S1SvImJ_G0030048.1 mouse_genomes_project 5 125992764 125996128 + Vps29 protein_coding retained_intron MGP_129S1SvImJ_T0070489.1 MGP_129S1SvImJ_G0029351.1 mouse_genomes_project 5 22334400 22341937 + MGP_129S1SvImJ_P0070489 Chpf2 protein_coding protein_coding MGP_129S1SvImJ_T0070490.1 MGP_129S1SvImJ_G0029351.1 mouse_genomes_project 5 22334401 22336714 + Chpf2 protein_coding processed_transcript MGP_129S1SvImJ_T0070491.1 MGP_129S1SvImJ_G0029351.1 mouse_genomes_project 5 22334409 22340025 + MGP_129S1SvImJ_P0070491 Chpf2 protein_coding protein_coding MGP_129S1SvImJ_T0070492.1 MGP_129S1SvImJ_G0029351.1 mouse_genomes_project 5 22334431 22335908 + Chpf2 protein_coding processed_transcript MGP_129S1SvImJ_T0070493.1 MGP_129S1SvImJ_G0029351.1 mouse_genomes_project 5 22334484 22338761 + MGP_129S1SvImJ_P0070493 Chpf2 protein_coding protein_coding MGP_129S1SvImJ_T0070497.1 MGP_129S1SvImJ_G0029351.1 mouse_genomes_project 5 22341028 22342098 + Chpf2 protein_coding processed_transcript MGP_129S1SvImJ_T0018215.1 MGP_129S1SvImJ_G0015611.1 mouse_genomes_project 5 126666433 126691679 - Gm44574 processed_transcript processed_transcript MGP_129S1SvImJ_T0008099.1 MGP_129S1SvImJ_G0006609.1 mouse_genomes_project 5 31611811 31612651 - Gm43851 lincRNA lincRNA MGP_129S1SvImJ_T0001805.1 MGP_129S1SvImJ_G0001720.1 mouse_genomes_project 5 120189624 120192246 + TEC TEC MGP_129S1SvImJ_T0073453.1 MGP_129S1SvImJ_G0029923.1 mouse_genomes_project 5 116450728 116456272 + MGP_129S1SvImJ_P0073453 Iscu protein_coding protein_coding MGP_129S1SvImJ_T0073454.1 MGP_129S1SvImJ_G0029923.1 mouse_genomes_project 5 116450783 116456257 + MGP_129S1SvImJ_P0073454 Iscu protein_coding protein_coding MGP_129S1SvImJ_T0073455.1 MGP_129S1SvImJ_G0029923.1 mouse_genomes_project 5 116450783 116455782 + MGP_129S1SvImJ_P0073455 Iscu protein_coding protein_coding MGP_129S1SvImJ_T0073456.1 MGP_129S1SvImJ_G0029923.1 mouse_genomes_project 5 116450798 116455023 + MGP_129S1SvImJ_P0073456 Iscu protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073457.1 MGP_129S1SvImJ_G0029923.1 mouse_genomes_project 5 116450985 116455998 + MGP_129S1SvImJ_P0073457 Iscu protein_coding protein_coding MGP_129S1SvImJ_T0073458.1 MGP_129S1SvImJ_G0029923.1 mouse_genomes_project 5 116451005 116455929 + MGP_129S1SvImJ_P0073458 Iscu protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073459.1 MGP_129S1SvImJ_G0029923.1 mouse_genomes_project 5 116451830 116455825 + MGP_129S1SvImJ_P0073459 Iscu protein_coding protein_coding MGP_129S1SvImJ_T0008315.1 MGP_129S1SvImJ_G0006763.1 mouse_genomes_project 5 115248815 115251554 + Gm42864 lincRNA lincRNA MGP_129S1SvImJ_T0075651.1 MGP_129S1SvImJ_G0030325.1 mouse_genomes_project 5 148556241 148569514 + MGP_129S1SvImJ_P0075651 Zfp12 protein_coding protein_coding MGP_129S1SvImJ_T0075652.1 MGP_129S1SvImJ_G0030325.1 mouse_genomes_project 5 148556252 148570400 + MGP_129S1SvImJ_P0075652 Zfp12 protein_coding protein_coding MGP_129S1SvImJ_T0075653.1 MGP_129S1SvImJ_G0030325.1 mouse_genomes_project 5 148556325 148569522 + MGP_129S1SvImJ_P0075653 Zfp12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075654.1 MGP_129S1SvImJ_G0030325.1 mouse_genomes_project 5 148556857 148561646 + MGP_129S1SvImJ_P0075654 Zfp12 protein_coding protein_coding MGP_129S1SvImJ_T0075655.1 MGP_129S1SvImJ_G0030325.1 mouse_genomes_project 5 148561604 148566196 + Zfp12 protein_coding processed_transcript MGP_129S1SvImJ_T0001583.1 MGP_129S1SvImJ_G0001501.1 mouse_genomes_project 5 47672132 47675048 - TEC TEC MGP_129S1SvImJ_T0008347.1 MGP_129S1SvImJ_G0006787.1 mouse_genomes_project 5 122438014 122443516 - Gm7538 lincRNA lincRNA MGP_129S1SvImJ_T0074591.1 MGP_129S1SvImJ_G0030124.1 mouse_genomes_project 5 133160664 133287640 + MGP_129S1SvImJ_P0074591 Adgrd1 protein_coding protein_coding MGP_129S1SvImJ_T0074592.1 MGP_129S1SvImJ_G0030124.1 mouse_genomes_project 5 133160671 133164407 + Adgrd1 protein_coding retained_intron MGP_129S1SvImJ_T0074593.1 MGP_129S1SvImJ_G0030124.1 mouse_genomes_project 5 133160671 133286721 + MGP_129S1SvImJ_P0074593 Adgrd1 protein_coding protein_coding MGP_129S1SvImJ_T0074858.1 MGP_129S1SvImJ_G0030168.1 mouse_genomes_project 5 139458083 139459342 + MGP_129S1SvImJ_P0074858 Cldn3 protein_coding protein_coding MGP_129S1SvImJ_T0072478.1 MGP_129S1SvImJ_G0029704.1 mouse_genomes_project 5 89323453 89336645 + MGP_129S1SvImJ_P0072478 Prol1 protein_coding protein_coding MGP_129S1SvImJ_T0010754.1 MGP_129S1SvImJ_G0008870.1 mouse_genomes_project 5 145493676 145493747 + Mir7038 miRNA miRNA MGP_129S1SvImJ_T0004716.1 MGP_129S1SvImJ_G0004084.1 mouse_genomes_project 5 52604570 52605548 - Gm42747 antisense antisense MGP_129S1SvImJ_T0071123.1 MGP_129S1SvImJ_G0029459.1 mouse_genomes_project 5 32360257 32378119 - MGP_129S1SvImJ_P0071123 Haus3 protein_coding protein_coding MGP_129S1SvImJ_T0071124.1 MGP_129S1SvImJ_G0029459.1 mouse_genomes_project 5 32369180 32378040 - Haus3 protein_coding retained_intron MGP_129S1SvImJ_T0071125.1 MGP_129S1SvImJ_G0029459.1 mouse_genomes_project 5 32369419 32370222 - Haus3 protein_coding processed_transcript MGP_129S1SvImJ_T0071126.1 MGP_129S1SvImJ_G0029459.1 mouse_genomes_project 5 32376523 32378044 - Haus3 protein_coding processed_transcript MGP_129S1SvImJ_T0071127.1 MGP_129S1SvImJ_G0029459.1 mouse_genomes_project 5 32376615 32378095 - MGP_129S1SvImJ_P0071127 Haus3 protein_coding protein_coding MGP_129S1SvImJ_T0071128.1 MGP_129S1SvImJ_G0029459.1 mouse_genomes_project 5 32376828 32378025 - MGP_129S1SvImJ_P0071128 Haus3 protein_coding protein_coding MGP_129S1SvImJ_T0008283.1 MGP_129S1SvImJ_G0006748.1 mouse_genomes_project 5 112985538 113000623 + A630023P12Rik lincRNA lincRNA MGP_129S1SvImJ_T0008284.1 MGP_129S1SvImJ_G0006748.1 mouse_genomes_project 5 112985559 112986138 + A630023P12Rik lincRNA lincRNA MGP_129S1SvImJ_T0008285.1 MGP_129S1SvImJ_G0006748.1 mouse_genomes_project 5 112991553 112999777 + A630023P12Rik lincRNA lincRNA MGP_129S1SvImJ_T0008286.1 MGP_129S1SvImJ_G0006748.1 mouse_genomes_project 5 112991589 112992488 + A630023P12Rik lincRNA lincRNA MGP_129S1SvImJ_T0008287.1 MGP_129S1SvImJ_G0006748.1 mouse_genomes_project 5 112991620 113000631 + A630023P12Rik lincRNA lincRNA MGP_129S1SvImJ_T0075168.1 MGP_129S1SvImJ_G0030226.1 mouse_genomes_project 5 142119483 142236468 - MGP_129S1SvImJ_P0075168 Zan protein_coding protein_coding MGP_129S1SvImJ_T0075169.1 MGP_129S1SvImJ_G0030226.1 mouse_genomes_project 5 142119483 142235999 - MGP_129S1SvImJ_P0075169 Zan protein_coding protein_coding MGP_129S1SvImJ_T0075170.1 MGP_129S1SvImJ_G0030226.1 mouse_genomes_project 5 142139632 142145664 - Zan protein_coding retained_intron MGP_129S1SvImJ_T0075171.1 MGP_129S1SvImJ_G0030226.1 mouse_genomes_project 5 142157136 142159877 - MGP_129S1SvImJ_P0075171 Zan protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075172.1 MGP_129S1SvImJ_G0030226.1 mouse_genomes_project 5 142187578 142207353 - Zan protein_coding retained_intron MGP_129S1SvImJ_T0070756.1 MGP_129S1SvImJ_G0029404.1 mouse_genomes_project 5 28929392 28938117 + MGP_129S1SvImJ_P0070756 Tcf23 protein_coding protein_coding MGP_129S1SvImJ_T0073139.1 MGP_129S1SvImJ_G0029856.1 mouse_genomes_project 5 110554395 110564548 - MGP_129S1SvImJ_P0073139 Mfsd7a protein_coding protein_coding MGP_129S1SvImJ_T0001815.1 MGP_129S1SvImJ_G0001730.1 mouse_genomes_project 5 122222764 122225199 - TEC TEC MGP_129S1SvImJ_T0074119.1 MGP_129S1SvImJ_G0030049.1 mouse_genomes_project 5 125999717 126007487 - MGP_129S1SvImJ_P0074119 Fam216a protein_coding protein_coding MGP_129S1SvImJ_T0070663.1 MGP_129S1SvImJ_G0029388.1 mouse_genomes_project 5 28257408 28296463 + MGP_129S1SvImJ_P0070663 Drc1 protein_coding protein_coding MGP_129S1SvImJ_T0070664.1 MGP_129S1SvImJ_G0029388.1 mouse_genomes_project 5 28268405 28269457 + Drc1 protein_coding processed_transcript MGP_129S1SvImJ_T0070665.1 MGP_129S1SvImJ_G0029388.1 mouse_genomes_project 5 28272673 28284037 + Drc1 protein_coding processed_transcript MGP_129S1SvImJ_T0070666.1 MGP_129S1SvImJ_G0029388.1 mouse_genomes_project 5 28281078 28284622 + Drc1 protein_coding processed_transcript MGP_129S1SvImJ_T0070901.1 MGP_129S1SvImJ_G0029424.1 mouse_genomes_project 5 29295311 29328057 + MGP_129S1SvImJ_P0070901 Gckr protein_coding protein_coding MGP_129S1SvImJ_T0070902.1 MGP_129S1SvImJ_G0029424.1 mouse_genomes_project 5 29295422 29328038 + Gckr protein_coding retained_intron MGP_129S1SvImJ_T0070903.1 MGP_129S1SvImJ_G0029424.1 mouse_genomes_project 5 29295449 29328045 + MGP_129S1SvImJ_P0070903 Gckr protein_coding protein_coding MGP_129S1SvImJ_T0070904.1 MGP_129S1SvImJ_G0029424.1 mouse_genomes_project 5 29295480 29298449 + MGP_129S1SvImJ_P0070904 Gckr protein_coding protein_coding MGP_129S1SvImJ_T0070905.1 MGP_129S1SvImJ_G0029424.1 mouse_genomes_project 5 29296569 29304436 + Gckr protein_coding retained_intron MGP_129S1SvImJ_T0070906.1 MGP_129S1SvImJ_G0029424.1 mouse_genomes_project 5 29297374 29303342 + Gckr protein_coding retained_intron MGP_129S1SvImJ_T0070907.1 MGP_129S1SvImJ_G0029424.1 mouse_genomes_project 5 29326973 29328040 + Gckr protein_coding retained_intron MGP_129S1SvImJ_T0070244.1 MGP_129S1SvImJ_G0029305.1 mouse_genomes_project 5 14965150 15118403 + MGP_129S1SvImJ_P0070244 Sema3c protein_coding protein_coding MGP_129S1SvImJ_T0070245.1 MGP_129S1SvImJ_G0029305.1 mouse_genomes_project 5 14965518 15069801 + MGP_129S1SvImJ_P0070245 Sema3c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070246.1 MGP_129S1SvImJ_G0029305.1 mouse_genomes_project 5 14965635 14969038 + Sema3c protein_coding retained_intron MGP_129S1SvImJ_T0070247.1 MGP_129S1SvImJ_G0029305.1 mouse_genomes_project 5 14965768 15062238 + MGP_129S1SvImJ_P0070247 Sema3c protein_coding protein_coding MGP_129S1SvImJ_T0070248.1 MGP_129S1SvImJ_G0029305.1 mouse_genomes_project 5 15079077 15118400 + Sema3c protein_coding retained_intron MGP_129S1SvImJ_T0014935.1 MGP_129S1SvImJ_G0013024.1 mouse_genomes_project 5 24714150 24714285 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0071448.1 MGP_129S1SvImJ_G0029511.1 mouse_genomes_project 5 36728084 36731236 + MGP_129S1SvImJ_P0071448 Drd5 protein_coding protein_coding MGP_129S1SvImJ_T0075626.1 MGP_129S1SvImJ_G0030320.1 mouse_genomes_project 5 148260457 148275004 + MGP_129S1SvImJ_P0075626 Fscn1 protein_coding protein_coding MGP_129S1SvImJ_T0075627.1 MGP_129S1SvImJ_G0030320.1 mouse_genomes_project 5 148260490 148275002 + MGP_129S1SvImJ_P0075627 Fscn1 protein_coding protein_coding MGP_129S1SvImJ_T0075628.1 MGP_129S1SvImJ_G0030320.1 mouse_genomes_project 5 148260957 148273988 + MGP_129S1SvImJ_P0075628 Fscn1 protein_coding protein_coding MGP_129S1SvImJ_T0075629.1 MGP_129S1SvImJ_G0030320.1 mouse_genomes_project 5 148263062 148272369 + Fscn1 protein_coding processed_transcript MGP_129S1SvImJ_T0075630.1 MGP_129S1SvImJ_G0030320.1 mouse_genomes_project 5 148263359 148273771 + Fscn1 protein_coding processed_transcript MGP_129S1SvImJ_T0075631.1 MGP_129S1SvImJ_G0030320.1 mouse_genomes_project 5 148264628 148272491 + Fscn1 protein_coding processed_transcript MGP_129S1SvImJ_T0075632.1 MGP_129S1SvImJ_G0030320.1 mouse_genomes_project 5 148271901 148273807 + Fscn1 protein_coding retained_intron MGP_129S1SvImJ_T0070133.1 MGP_129S1SvImJ_G0029282.1 mouse_genomes_project 5 5143512 5146155 + MGP_129S1SvImJ_P0070133 protein_coding protein_coding MGP_129S1SvImJ_T0004903.1 MGP_129S1SvImJ_G0004216.1 mouse_genomes_project 5 148720684 148733527 - Gm20635 antisense antisense MGP_129S1SvImJ_T0101714.1 MGP_129S1SvImJ_G0039719.1 mouse_genomes_project 5 27128415 27129257 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0099912.1 MGP_129S1SvImJ_G0037979.1 mouse_genomes_project 5 32368833 32368936 + Gm25918 snRNA snRNA MGP_129S1SvImJ_T0004857.1 MGP_129S1SvImJ_G0004183.1 mouse_genomes_project 5 128601792 128602304 - Gm43777 antisense antisense MGP_129S1SvImJ_T0102571.1 MGP_129S1SvImJ_G0040404.1 mouse_genomes_project 5 95984903 95986165 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0001901.1 MGP_129S1SvImJ_G0001814.1 mouse_genomes_project 5 139398529 139400151 - TEC TEC MGP_129S1SvImJ_T0004713.1 MGP_129S1SvImJ_G0004081.1 mouse_genomes_project 5 51520253 51521502 + Gm43685 antisense antisense MGP_129S1SvImJ_T0071700.1 MGP_129S1SvImJ_G0029554.1 mouse_genomes_project 5 52519948 52715778 + MGP_129S1SvImJ_P0071700 Rbpj protein_coding protein_coding MGP_129S1SvImJ_T0071701.1 MGP_129S1SvImJ_G0029554.1 mouse_genomes_project 5 52613912 52615431 + Rbpj protein_coding retained_intron MGP_129S1SvImJ_T0071702.1 MGP_129S1SvImJ_G0029554.1 mouse_genomes_project 5 52614040 52725467 + MGP_129S1SvImJ_P0071702 Rbpj protein_coding protein_coding MGP_129S1SvImJ_T0071703.1 MGP_129S1SvImJ_G0029554.1 mouse_genomes_project 5 52653239 52725471 + MGP_129S1SvImJ_P0071703 Rbpj protein_coding protein_coding MGP_129S1SvImJ_T0071704.1 MGP_129S1SvImJ_G0029554.1 mouse_genomes_project 5 52653393 52725471 + MGP_129S1SvImJ_P0071704 Rbpj protein_coding protein_coding MGP_129S1SvImJ_T0071705.1 MGP_129S1SvImJ_G0029554.1 mouse_genomes_project 5 52653496 52725471 + MGP_129S1SvImJ_P0071705 Rbpj protein_coding protein_coding MGP_129S1SvImJ_T0071706.1 MGP_129S1SvImJ_G0029554.1 mouse_genomes_project 5 52653730 52722244 + MGP_129S1SvImJ_P0071706 Rbpj protein_coding protein_coding MGP_129S1SvImJ_T0071707.1 MGP_129S1SvImJ_G0029554.1 mouse_genomes_project 5 52684243 52710979 + Rbpj protein_coding processed_transcript MGP_129S1SvImJ_T0071708.1 MGP_129S1SvImJ_G0029554.1 mouse_genomes_project 5 52689721 52707057 + Rbpj protein_coding processed_transcript MGP_129S1SvImJ_T0071709.1 MGP_129S1SvImJ_G0029554.1 mouse_genomes_project 5 52689884 52707057 + Rbpj protein_coding processed_transcript MGP_129S1SvImJ_T0071710.1 MGP_129S1SvImJ_G0029554.1 mouse_genomes_project 5 52703627 52707059 + Rbpj protein_coding retained_intron MGP_129S1SvImJ_T0071711.1 MGP_129S1SvImJ_G0029554.1 mouse_genomes_project 5 52710737 52717847 + Rbpj protein_coding retained_intron MGP_129S1SvImJ_T0075266.1 MGP_129S1SvImJ_G0030243.1 mouse_genomes_project 5 142575024 142575938 + MGP_129S1SvImJ_P0075266 Ppp1r35 protein_coding protein_coding MGP_129S1SvImJ_T0075267.1 MGP_129S1SvImJ_G0030243.1 mouse_genomes_project 5 142575079 142576286 + MGP_129S1SvImJ_P0075267 Ppp1r35 protein_coding protein_coding MGP_129S1SvImJ_T0075268.1 MGP_129S1SvImJ_G0030243.1 mouse_genomes_project 5 142575612 142576282 + MGP_129S1SvImJ_P0075268 Ppp1r35 protein_coding protein_coding MGP_129S1SvImJ_T0075269.1 MGP_129S1SvImJ_G0030243.1 mouse_genomes_project 5 142575719 142576286 + Ppp1r35 protein_coding retained_intron MGP_129S1SvImJ_T0010725.1 MGP_129S1SvImJ_G0008841.1 mouse_genomes_project 5 117140545 117140617 + Mir7027 miRNA miRNA MGP_129S1SvImJ_T0069992.1 MGP_129S1SvImJ_G0029262.1 mouse_genomes_project 5 507190 623991 - MGP_129S1SvImJ_P0069992 Ankib1 protein_coding protein_coding MGP_129S1SvImJ_T0069993.1 MGP_129S1SvImJ_G0029262.1 mouse_genomes_project 5 510659 519156 - Ankib1 protein_coding retained_intron MGP_129S1SvImJ_T0069994.1 MGP_129S1SvImJ_G0029262.1 mouse_genomes_project 5 511070 616626 - MGP_129S1SvImJ_P0069994 Ankib1 protein_coding protein_coding MGP_129S1SvImJ_T0069995.1 MGP_129S1SvImJ_G0029262.1 mouse_genomes_project 5 511991 512420 - Ankib1 protein_coding retained_intron MGP_129S1SvImJ_T0069996.1 MGP_129S1SvImJ_G0029262.1 mouse_genomes_project 5 517741 518893 - Ankib1 protein_coding retained_intron MGP_129S1SvImJ_T0069997.1 MGP_129S1SvImJ_G0029262.1 mouse_genomes_project 5 554428 623853 - Ankib1 protein_coding retained_intron MGP_129S1SvImJ_T0101719.1 MGP_129S1SvImJ_G0039723.1 mouse_genomes_project 5 57204954 57205528 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0071970.1 MGP_129S1SvImJ_G0029596.1 mouse_genomes_project 5 67390355 67396497 + MGP_129S1SvImJ_P0071970 Shisa3 protein_coding protein_coding MGP_129S1SvImJ_T0071971.1 MGP_129S1SvImJ_G0029596.1 mouse_genomes_project 5 67390442 67407332 + MGP_129S1SvImJ_P0071971 Shisa3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0015204.1 MGP_129S1SvImJ_G0013293.1 mouse_genomes_project 5 143524432 143524983 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072251.1 MGP_129S1SvImJ_G0029648.1 mouse_genomes_project 5 77084580 77119459 - MGP_129S1SvImJ_P0072251 Aasdh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072252.1 MGP_129S1SvImJ_G0029648.1 mouse_genomes_project 5 77086856 77087589 - Aasdh protein_coding processed_transcript MGP_129S1SvImJ_T0072253.1 MGP_129S1SvImJ_G0029648.1 mouse_genomes_project 5 77086856 77119546 - MGP_129S1SvImJ_P0072253 Aasdh protein_coding protein_coding MGP_129S1SvImJ_T0072254.1 MGP_129S1SvImJ_G0029648.1 mouse_genomes_project 5 77086861 77119545 - MGP_129S1SvImJ_P0072254 Aasdh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072255.1 MGP_129S1SvImJ_G0029648.1 mouse_genomes_project 5 77086907 77114781 - MGP_129S1SvImJ_P0072255 Aasdh protein_coding protein_coding MGP_129S1SvImJ_T0072256.1 MGP_129S1SvImJ_G0029648.1 mouse_genomes_project 5 77087089 77093589 - MGP_129S1SvImJ_P0072256 Aasdh protein_coding protein_coding MGP_129S1SvImJ_T0072257.1 MGP_129S1SvImJ_G0029648.1 mouse_genomes_project 5 77090516 77119524 - Aasdh protein_coding retained_intron MGP_129S1SvImJ_T0072258.1 MGP_129S1SvImJ_G0029648.1 mouse_genomes_project 5 77094045 77119519 - MGP_129S1SvImJ_P0072258 Aasdh protein_coding protein_coding MGP_129S1SvImJ_T0072259.1 MGP_129S1SvImJ_G0029648.1 mouse_genomes_project 5 77094060 77095858 - Aasdh protein_coding retained_intron MGP_129S1SvImJ_T0072260.1 MGP_129S1SvImJ_G0029648.1 mouse_genomes_project 5 77105214 77107672 - Aasdh protein_coding retained_intron MGP_129S1SvImJ_T0072261.1 MGP_129S1SvImJ_G0029648.1 mouse_genomes_project 5 77107043 77119524 - Aasdh protein_coding processed_transcript MGP_129S1SvImJ_T0072262.1 MGP_129S1SvImJ_G0029648.1 mouse_genomes_project 5 77108835 77119524 - Aasdh protein_coding retained_intron MGP_129S1SvImJ_T0072263.1 MGP_129S1SvImJ_G0029648.1 mouse_genomes_project 5 77114599 77119422 - MGP_129S1SvImJ_P0072263 Aasdh protein_coding protein_coding MGP_129S1SvImJ_T0072264.1 MGP_129S1SvImJ_G0029648.1 mouse_genomes_project 5 77114688 77119535 - MGP_129S1SvImJ_P0072264 Aasdh protein_coding protein_coding MGP_129S1SvImJ_T0072265.1 MGP_129S1SvImJ_G0029648.1 mouse_genomes_project 5 77118361 77119460 - Aasdh protein_coding processed_transcript MGP_129S1SvImJ_T0074568.1 MGP_129S1SvImJ_G0030119.1 mouse_genomes_project 5 132628840 132632086 + MGP_129S1SvImJ_P0074568 Fzd10 protein_coding protein_coding MGP_129S1SvImJ_T0073555.1 MGP_129S1SvImJ_G0029941.1 mouse_genomes_project 5 117385974 117425422 - MGP_129S1SvImJ_P0073555 Trpv4 protein_coding protein_coding MGP_129S1SvImJ_T0073556.1 MGP_129S1SvImJ_G0029941.1 mouse_genomes_project 5 117385976 117425419 - MGP_129S1SvImJ_P0073556 Trpv4 protein_coding protein_coding MGP_129S1SvImJ_T0073557.1 MGP_129S1SvImJ_G0029941.1 mouse_genomes_project 5 117385979 117403290 - Trpv4 protein_coding retained_intron MGP_129S1SvImJ_T0073558.1 MGP_129S1SvImJ_G0029941.1 mouse_genomes_project 5 117386475 117412060 - MGP_129S1SvImJ_P0073558 Trpv4 protein_coding protein_coding MGP_129S1SvImJ_T0073559.1 MGP_129S1SvImJ_G0029941.1 mouse_genomes_project 5 117386475 117412060 - MGP_129S1SvImJ_P0073559 Trpv4 protein_coding protein_coding MGP_129S1SvImJ_T0073560.1 MGP_129S1SvImJ_G0029941.1 mouse_genomes_project 5 117386475 117412060 - MGP_129S1SvImJ_P0073560 Trpv4 protein_coding protein_coding MGP_129S1SvImJ_T0073561.1 MGP_129S1SvImJ_G0029941.1 mouse_genomes_project 5 117393802 117397696 - Trpv4 protein_coding retained_intron MGP_129S1SvImJ_T0011608.1 MGP_129S1SvImJ_G0009724.1 mouse_genomes_project 5 21145460 21145790 - Gm25219 misc_RNA misc_RNA MGP_129S1SvImJ_T0071714.1 MGP_129S1SvImJ_G0029556.1 mouse_genomes_project 5 52896400 52932531 + MGP_129S1SvImJ_P0071714 Tbc1d19 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071715.1 MGP_129S1SvImJ_G0029556.1 mouse_genomes_project 5 52896421 52991105 + MGP_129S1SvImJ_P0071715 Tbc1d19 protein_coding protein_coding MGP_129S1SvImJ_T0071716.1 MGP_129S1SvImJ_G0029556.1 mouse_genomes_project 5 52896442 52923481 + Tbc1d19 protein_coding processed_transcript MGP_129S1SvImJ_T0071717.1 MGP_129S1SvImJ_G0029556.1 mouse_genomes_project 5 52896443 52917790 + Tbc1d19 protein_coding retained_intron MGP_129S1SvImJ_T0071718.1 MGP_129S1SvImJ_G0029556.1 mouse_genomes_project 5 52896448 52991103 + MGP_129S1SvImJ_P0071718 Tbc1d19 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071719.1 MGP_129S1SvImJ_G0029556.1 mouse_genomes_project 5 52896473 52925020 + MGP_129S1SvImJ_P0071719 Tbc1d19 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071720.1 MGP_129S1SvImJ_G0029556.1 mouse_genomes_project 5 52919617 52924962 + Tbc1d19 protein_coding retained_intron MGP_129S1SvImJ_T0071721.1 MGP_129S1SvImJ_G0029556.1 mouse_genomes_project 5 52923470 52936191 + Tbc1d19 protein_coding processed_transcript MGP_129S1SvImJ_T0071722.1 MGP_129S1SvImJ_G0029556.1 mouse_genomes_project 5 52978243 52990878 + Tbc1d19 protein_coding processed_transcript MGP_129S1SvImJ_T0076050.1 MGP_129S1SvImJ_G0030408.1 mouse_genomes_project 5 156029222 156272482 + MGP_129S1SvImJ_P0076050 Fry protein_coding protein_coding MGP_129S1SvImJ_T0076051.1 MGP_129S1SvImJ_G0030408.1 mouse_genomes_project 5 156029244 156281063 + Fry protein_coding retained_intron MGP_129S1SvImJ_T0076052.1 MGP_129S1SvImJ_G0030408.1 mouse_genomes_project 5 156029244 156277989 + MGP_129S1SvImJ_P0076052 Fry protein_coding protein_coding MGP_129S1SvImJ_T0076053.1 MGP_129S1SvImJ_G0030408.1 mouse_genomes_project 5 156111109 156272457 + MGP_129S1SvImJ_P0076053 Fry protein_coding protein_coding MGP_129S1SvImJ_T0076054.1 MGP_129S1SvImJ_G0030408.1 mouse_genomes_project 5 156185452 156188735 + Fry protein_coding retained_intron MGP_129S1SvImJ_T0076055.1 MGP_129S1SvImJ_G0030408.1 mouse_genomes_project 5 156188596 156436767 + MGP_129S1SvImJ_P0076055 Fry protein_coding protein_coding MGP_129S1SvImJ_T0076056.1 MGP_129S1SvImJ_G0030408.1 mouse_genomes_project 5 156224031 156323041 + Fry protein_coding retained_intron MGP_129S1SvImJ_T0076057.1 MGP_129S1SvImJ_G0030408.1 mouse_genomes_project 5 156333340 156336011 + Fry protein_coding retained_intron MGP_129S1SvImJ_T0076058.1 MGP_129S1SvImJ_G0030408.1 mouse_genomes_project 5 156344644 156348033 + Fry protein_coding retained_intron MGP_129S1SvImJ_T0076059.1 MGP_129S1SvImJ_G0030408.1 mouse_genomes_project 5 156367105 156370573 + Fry protein_coding retained_intron MGP_129S1SvImJ_T0076060.1 MGP_129S1SvImJ_G0030408.1 mouse_genomes_project 5 156376506 156436767 + MGP_129S1SvImJ_P0076060 Fry protein_coding protein_coding MGP_129S1SvImJ_T0076061.1 MGP_129S1SvImJ_G0030408.1 mouse_genomes_project 5 156389183 156436767 + MGP_129S1SvImJ_P0076061 Fry protein_coding protein_coding MGP_129S1SvImJ_T0076062.1 MGP_129S1SvImJ_G0030408.1 mouse_genomes_project 5 156395766 156435807 + Fry protein_coding retained_intron MGP_129S1SvImJ_T0076063.1 MGP_129S1SvImJ_G0030408.1 mouse_genomes_project 5 156398701 156402383 + Fry protein_coding retained_intron MGP_129S1SvImJ_T0076064.1 MGP_129S1SvImJ_G0030408.1 mouse_genomes_project 5 156426204 156428822 + Fry protein_coding retained_intron MGP_129S1SvImJ_T0076065.1 MGP_129S1SvImJ_G0030408.1 mouse_genomes_project 5 156429133 156431010 + Fry protein_coding retained_intron MGP_129S1SvImJ_T0076066.1 MGP_129S1SvImJ_G0030408.1 mouse_genomes_project 5 156434880 156436649 + Fry protein_coding retained_intron MGP_129S1SvImJ_T0015097.1 MGP_129S1SvImJ_G0013186.1 mouse_genomes_project 5 99420858 99421474 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0074932.1 MGP_129S1SvImJ_G0030183.1 mouse_genomes_project 5 139935312 140091863 - MGP_129S1SvImJ_P0074932 Hip1 protein_coding protein_coding MGP_129S1SvImJ_T0074933.1 MGP_129S1SvImJ_G0030183.1 mouse_genomes_project 5 139935316 139967287 - MGP_129S1SvImJ_P0074933 Hip1 protein_coding protein_coding MGP_129S1SvImJ_T0074934.1 MGP_129S1SvImJ_G0030183.1 mouse_genomes_project 5 139961094 139962274 - Hip1 protein_coding retained_intron MGP_129S1SvImJ_T0074935.1 MGP_129S1SvImJ_G0030183.1 mouse_genomes_project 5 139962400 139973577 - MGP_129S1SvImJ_P0074935 Hip1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074936.1 MGP_129S1SvImJ_G0030183.1 mouse_genomes_project 5 139966577 140091868 - Hip1 protein_coding retained_intron MGP_129S1SvImJ_T0074937.1 MGP_129S1SvImJ_G0030183.1 mouse_genomes_project 5 139970618 139986553 - Hip1 protein_coding processed_transcript MGP_129S1SvImJ_T0074938.1 MGP_129S1SvImJ_G0030183.1 mouse_genomes_project 5 139982738 140025991 - MGP_129S1SvImJ_P0074938 Hip1 protein_coding protein_coding MGP_129S1SvImJ_T0074939.1 MGP_129S1SvImJ_G0030183.1 mouse_genomes_project 5 139986436 139992244 - Hip1 protein_coding retained_intron MGP_129S1SvImJ_T0074940.1 MGP_129S1SvImJ_G0030183.1 mouse_genomes_project 5 139993119 140091863 - Hip1 protein_coding retained_intron MGP_129S1SvImJ_T0098946.1 MGP_129S1SvImJ_G0037024.1 mouse_genomes_project 5 2056550 2062181 - Gm10484 sense_intronic sense_intronic MGP_129S1SvImJ_T0008488.1 MGP_129S1SvImJ_G0006884.1 mouse_genomes_project 5 156540183 156542662 - Gm43598 lincRNA lincRNA MGP_129S1SvImJ_T0001779.1 MGP_129S1SvImJ_G0001694.1 mouse_genomes_project 5 113687358 113687898 + TEC TEC MGP_129S1SvImJ_T0076012.1 MGP_129S1SvImJ_G0030401.1 mouse_genomes_project 5 155080293 155108937 + MGP_129S1SvImJ_P0076012 Alox5ap protein_coding protein_coding MGP_129S1SvImJ_T0076013.1 MGP_129S1SvImJ_G0030401.1 mouse_genomes_project 5 155099806 155108543 + MGP_129S1SvImJ_P0076013 Alox5ap protein_coding protein_coding MGP_129S1SvImJ_T0076014.1 MGP_129S1SvImJ_G0030401.1 mouse_genomes_project 5 155108207 155108837 + Alox5ap protein_coding processed_transcript MGP_129S1SvImJ_T0010703.1 MGP_129S1SvImJ_G0008819.1 mouse_genomes_project 5 64577848 64577926 + Mir574 miRNA miRNA MGP_129S1SvImJ_T0098757.1 MGP_129S1SvImJ_G0036842.1 mouse_genomes_project 5 93210271 93210400 - Gm22728 scaRNA scaRNA MGP_129S1SvImJ_T0008288.1 MGP_129S1SvImJ_G0006749.1 mouse_genomes_project 5 113136069 113137663 + Gm42595 lincRNA lincRNA MGP_129S1SvImJ_T0015030.1 MGP_129S1SvImJ_G0013119.1 mouse_genomes_project 5 63836766 63837412 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101711.1 MGP_129S1SvImJ_G0039717.1 mouse_genomes_project 5 20519403 20519966 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0004667.1 MGP_129S1SvImJ_G0004046.1 mouse_genomes_project 5 22668777 22672706 + Prkag2os1 antisense antisense MGP_129S1SvImJ_T0074496.1 MGP_129S1SvImJ_G0030106.1 mouse_genomes_project 5 128648552 128674415 + MGP_129S1SvImJ_P0074496 Zfp664 protein_coding protein_coding MGP_129S1SvImJ_T0074497.1 MGP_129S1SvImJ_G0030106.1 mouse_genomes_project 5 128648625 128693109 + Zfp664 protein_coding processed_transcript MGP_129S1SvImJ_T0074498.1 MGP_129S1SvImJ_G0030106.1 mouse_genomes_project 5 128648900 128671092 + Zfp664 protein_coding processed_transcript MGP_129S1SvImJ_T0074499.1 MGP_129S1SvImJ_G0030106.1 mouse_genomes_project 5 128660010 128662155 + Zfp664 protein_coding processed_transcript MGP_129S1SvImJ_T0074500.1 MGP_129S1SvImJ_G0030106.1 mouse_genomes_project 5 128661827 128671262 + Zfp664 protein_coding processed_transcript MGP_129S1SvImJ_T0074501.1 MGP_129S1SvImJ_G0030106.1 mouse_genomes_project 5 128670353 128674415 + Zfp664 protein_coding processed_transcript MGP_129S1SvImJ_T0102559.1 MGP_129S1SvImJ_G0040392.1 mouse_genomes_project 5 68377342 68403708 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0010686.1 MGP_129S1SvImJ_G0008802.1 mouse_genomes_project 5 22339654 22339752 + Mir671 miRNA miRNA MGP_129S1SvImJ_T0072686.1 MGP_129S1SvImJ_G0029756.1 mouse_genomes_project 5 93876607 94174313 + MGP_129S1SvImJ_P0072686 Shroom3 protein_coding protein_coding MGP_129S1SvImJ_T0072687.1 MGP_129S1SvImJ_G0029756.1 mouse_genomes_project 5 93876649 94174275 + MGP_129S1SvImJ_P0072687 Shroom3 protein_coding protein_coding MGP_129S1SvImJ_T0072688.1 MGP_129S1SvImJ_G0029756.1 mouse_genomes_project 5 94006757 94012006 + Shroom3 protein_coding processed_transcript MGP_129S1SvImJ_T0072689.1 MGP_129S1SvImJ_G0029756.1 mouse_genomes_project 5 94011987 94038599 + Shroom3 protein_coding processed_transcript MGP_129S1SvImJ_T0072690.1 MGP_129S1SvImJ_G0029756.1 mouse_genomes_project 5 94132379 94148692 + MGP_129S1SvImJ_P0072690 Shroom3 protein_coding protein_coding MGP_129S1SvImJ_T0072691.1 MGP_129S1SvImJ_G0029756.1 mouse_genomes_project 5 94146858 94150484 + Shroom3 protein_coding retained_intron MGP_129S1SvImJ_T0072692.1 MGP_129S1SvImJ_G0029756.1 mouse_genomes_project 5 94156129 94157040 + Shroom3 protein_coding retained_intron MGP_129S1SvImJ_T0072693.1 MGP_129S1SvImJ_G0029756.1 mouse_genomes_project 5 94170285 94174341 + Shroom3 protein_coding retained_intron MGP_129S1SvImJ_T0102584.1 MGP_129S1SvImJ_G0040417.1 mouse_genomes_project 5 150438492 150439265 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0014888.1 MGP_129S1SvImJ_G0012977.1 mouse_genomes_project 5 13695723 13696507 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015140.1 MGP_129S1SvImJ_G0013229.1 mouse_genomes_project 5 111224419 111225137 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070101.1 MGP_129S1SvImJ_G0029279.1 mouse_genomes_project 5 4918733 4938880 + MGP_129S1SvImJ_P0070101 Steap4 protein_coding protein_coding MGP_129S1SvImJ_T0015240.1 MGP_129S1SvImJ_G0013329.1 mouse_genomes_project 5 155329348 155329898 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073543.1 MGP_129S1SvImJ_G0029938.1 mouse_genomes_project 5 117169356 117183717 - MGP_129S1SvImJ_P0073543 Mmab protein_coding protein_coding MGP_129S1SvImJ_T0073544.1 MGP_129S1SvImJ_G0029938.1 mouse_genomes_project 5 117171522 117183678 - MGP_129S1SvImJ_P0073544 Mmab protein_coding protein_coding MGP_129S1SvImJ_T0073545.1 MGP_129S1SvImJ_G0029938.1 mouse_genomes_project 5 117172953 117183649 - MGP_129S1SvImJ_P0073545 Mmab protein_coding protein_coding MGP_129S1SvImJ_T0008467.1 MGP_129S1SvImJ_G0006871.1 mouse_genomes_project 5 154928032 154997942 - 5730422E09Rik lincRNA lincRNA MGP_129S1SvImJ_T0008468.1 MGP_129S1SvImJ_G0006871.1 mouse_genomes_project 5 154928036 154931912 - 5730422E09Rik lincRNA lincRNA MGP_129S1SvImJ_T0001859.1 MGP_129S1SvImJ_G0001773.1 mouse_genomes_project 5 132763261 132763929 - TEC TEC MGP_129S1SvImJ_T0071317.1 MGP_129S1SvImJ_G0029487.1 mouse_genomes_project 5 34525316 34527864 + MGP_129S1SvImJ_P0071317 Psapl1 protein_coding protein_coding MGP_129S1SvImJ_T0001912.1 MGP_129S1SvImJ_G0001825.1 mouse_genomes_project 5 145194965 145197296 - TEC TEC MGP_129S1SvImJ_T0098949.1 MGP_129S1SvImJ_G0037027.1 mouse_genomes_project 5 21340196 21341004 - Gm43566 sense_intronic sense_intronic MGP_129S1SvImJ_T0010713.1 MGP_129S1SvImJ_G0008829.1 mouse_genomes_project 5 88537986 88538078 - Mir3969 miRNA miRNA MGP_129S1SvImJ_T0008429.1 MGP_129S1SvImJ_G0006838.1 mouse_genomes_project 5 142275992 142283211 + Gm8066 lincRNA lincRNA MGP_129S1SvImJ_T0015212.1 MGP_129S1SvImJ_G0013301.1 mouse_genomes_project 5 148144866 148145451 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015209.1 MGP_129S1SvImJ_G0013298.1 mouse_genomes_project 5 145637745 145638149 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015135.1 MGP_129S1SvImJ_G0013224.1 mouse_genomes_project 5 110293144 110293620 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001770.1 MGP_129S1SvImJ_G0001685.1 mouse_genomes_project 5 109860115 109861461 - TEC TEC MGP_129S1SvImJ_T0073033.1 MGP_129S1SvImJ_G0029834.1 mouse_genomes_project 5 109105642 109306936 - MGP_129S1SvImJ_P0073033 Tgfbr3 protein_coding protein_coding MGP_129S1SvImJ_T0073034.1 MGP_129S1SvImJ_G0029834.1 mouse_genomes_project 5 109108352 109201702 - Tgfbr3 protein_coding processed_transcript MGP_129S1SvImJ_T0073035.1 MGP_129S1SvImJ_G0029834.1 mouse_genomes_project 5 109117355 109133544 - MGP_129S1SvImJ_P0073035 Tgfbr3 protein_coding protein_coding MGP_129S1SvImJ_T0073036.1 MGP_129S1SvImJ_G0029834.1 mouse_genomes_project 5 109151795 109306902 - Tgfbr3 protein_coding retained_intron MGP_129S1SvImJ_T0008378.1 MGP_129S1SvImJ_G0006807.1 mouse_genomes_project 5 129201868 129214422 + Gm42485 lincRNA lincRNA MGP_129S1SvImJ_T0076023.1 MGP_129S1SvImJ_G0030404.1 mouse_genomes_project 5 155364446 155457754 + MGP_129S1SvImJ_P0076023 Wdr95 protein_coding protein_coding MGP_129S1SvImJ_T0076024.1 MGP_129S1SvImJ_G0030404.1 mouse_genomes_project 5 155365912 155404803 + Wdr95 protein_coding retained_intron MGP_129S1SvImJ_T0076025.1 MGP_129S1SvImJ_G0030404.1 mouse_genomes_project 5 155365918 155443912 + MGP_129S1SvImJ_P0076025 Wdr95 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076026.1 MGP_129S1SvImJ_G0030404.1 mouse_genomes_project 5 155365960 155405872 + Wdr95 protein_coding retained_intron MGP_129S1SvImJ_T0076027.1 MGP_129S1SvImJ_G0030404.1 mouse_genomes_project 5 155365960 155457754 + MGP_129S1SvImJ_P0076027 Wdr95 protein_coding protein_coding MGP_129S1SvImJ_T0076028.1 MGP_129S1SvImJ_G0030404.1 mouse_genomes_project 5 155372799 155404803 + Wdr95 protein_coding retained_intron MGP_129S1SvImJ_T0076029.1 MGP_129S1SvImJ_G0030404.1 mouse_genomes_project 5 155424539 155430952 + Wdr95 protein_coding retained_intron MGP_129S1SvImJ_T0001614.1 MGP_129S1SvImJ_G0001531.1 mouse_genomes_project 5 51096973 51099949 - TEC TEC MGP_129S1SvImJ_T0073445.1 MGP_129S1SvImJ_G0029921.1 mouse_genomes_project 5 116411499 116416295 + MGP_129S1SvImJ_P0073445 Ficd protein_coding protein_coding MGP_129S1SvImJ_T0015073.1 MGP_129S1SvImJ_G0013162.1 mouse_genomes_project 5 87989815 87989891 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001813.1 MGP_129S1SvImJ_G0001728.1 mouse_genomes_project 5 121887882 121889518 + TEC TEC MGP_129S1SvImJ_T0008235.1 MGP_129S1SvImJ_G0006715.1 mouse_genomes_project 5 101374286 101399677 + lincRNA lincRNA MGP_129S1SvImJ_T0001687.1 MGP_129S1SvImJ_G0001603.1 mouse_genomes_project 5 67623096 67626575 - TEC TEC MGP_129S1SvImJ_T0075992.1 MGP_129S1SvImJ_G0030398.1 mouse_genomes_project 5 154673991 154786258 - MGP_129S1SvImJ_P0075992 Gm42791 protein_coding protein_coding MGP_129S1SvImJ_T0075995.1 MGP_129S1SvImJ_G0030398.1 mouse_genomes_project 5 154771524 154772180 - Gm42791 protein_coding processed_transcript MGP_129S1SvImJ_T0008085.1 MGP_129S1SvImJ_G0006599.1 mouse_genomes_project 5 25918608 25970199 - Gm26608 lincRNA lincRNA MGP_129S1SvImJ_T0008086.1 MGP_129S1SvImJ_G0006599.1 mouse_genomes_project 5 25953655 25955163 - Gm26608 lincRNA lincRNA MGP_129S1SvImJ_T0070567.1 MGP_129S1SvImJ_G0029367.1 mouse_genomes_project 5 25724135 25736803 + MGP_129S1SvImJ_P0070567 Htr5a protein_coding protein_coding MGP_129S1SvImJ_T0010691.1 MGP_129S1SvImJ_G0008807.1 mouse_genomes_project 5 32107315 32107377 - Mir7024 miRNA miRNA MGP_129S1SvImJ_T0070307.1 MGP_129S1SvImJ_G0029317.1 mouse_genomes_project 5 18971666 19033938 + MGP_129S1SvImJ_P0070307 Fam185a protein_coding protein_coding MGP_129S1SvImJ_T0070308.1 MGP_129S1SvImJ_G0029317.1 mouse_genomes_project 5 18971709 18980753 + Fam185a protein_coding retained_intron MGP_129S1SvImJ_T0070309.1 MGP_129S1SvImJ_G0029317.1 mouse_genomes_project 5 18980887 19032618 + Fam185a protein_coding processed_transcript MGP_129S1SvImJ_T0014883.1 MGP_129S1SvImJ_G0012972.1 mouse_genomes_project 5 11082839 11084141 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099943.1 MGP_129S1SvImJ_G0038010.1 mouse_genomes_project 5 93481336 93481455 + Gm23031 snRNA snRNA MGP_129S1SvImJ_T0008333.1 MGP_129S1SvImJ_G0006775.1 mouse_genomes_project 5 119281759 119285438 - Gm13838 lincRNA lincRNA MGP_129S1SvImJ_T0001485.1 MGP_129S1SvImJ_G0001406.1 mouse_genomes_project 5 13943859 13944851 + TEC TEC MGP_129S1SvImJ_T0073247.1 MGP_129S1SvImJ_G0029882.1 mouse_genomes_project 5 112673264 112701012 + MGP_129S1SvImJ_P0073247 Ankle2 protein_coding protein_coding MGP_129S1SvImJ_T0073248.1 MGP_129S1SvImJ_G0029882.1 mouse_genomes_project 5 112673264 112699833 + MGP_129S1SvImJ_P0073248 Ankle2 protein_coding protein_coding MGP_129S1SvImJ_T0073249.1 MGP_129S1SvImJ_G0029882.1 mouse_genomes_project 5 112673301 112701008 + MGP_129S1SvImJ_P0073249 Ankle2 protein_coding protein_coding MGP_129S1SvImJ_T0073250.1 MGP_129S1SvImJ_G0029882.1 mouse_genomes_project 5 112673423 112681341 + Ankle2 protein_coding retained_intron MGP_129S1SvImJ_T0073251.1 MGP_129S1SvImJ_G0029882.1 mouse_genomes_project 5 112680681 112681423 + Ankle2 protein_coding retained_intron MGP_129S1SvImJ_T0073252.1 MGP_129S1SvImJ_G0029882.1 mouse_genomes_project 5 112693891 112697429 + Ankle2 protein_coding processed_transcript MGP_129S1SvImJ_T0015216.1 MGP_129S1SvImJ_G0013305.1 mouse_genomes_project 5 148785042 148785579 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070605.1 MGP_129S1SvImJ_G0029377.1 mouse_genomes_project 5 27504434 27613298 + MGP_129S1SvImJ_P0070605 Ube3c protein_coding protein_coding MGP_129S1SvImJ_T0070606.1 MGP_129S1SvImJ_G0029377.1 mouse_genomes_project 5 27504638 27569721 + MGP_129S1SvImJ_P0070606 Ube3c protein_coding protein_coding MGP_129S1SvImJ_T0070607.1 MGP_129S1SvImJ_G0029377.1 mouse_genomes_project 5 27504678 27537679 + Ube3c protein_coding retained_intron MGP_129S1SvImJ_T0070608.1 MGP_129S1SvImJ_G0029377.1 mouse_genomes_project 5 27527998 27538216 + Ube3c protein_coding processed_transcript MGP_129S1SvImJ_T0070609.1 MGP_129S1SvImJ_G0029377.1 mouse_genomes_project 5 27568149 27569721 + Ube3c protein_coding retained_intron MGP_129S1SvImJ_T0075013.1 MGP_129S1SvImJ_G0030199.1 mouse_genomes_project 5 140703851 140737027 + MGP_129S1SvImJ_P0075013 Rasa4 protein_coding protein_coding MGP_129S1SvImJ_T0075014.1 MGP_129S1SvImJ_G0030199.1 mouse_genomes_project 5 140703889 140737027 + Rasa4 protein_coding retained_intron MGP_129S1SvImJ_T0075015.1 MGP_129S1SvImJ_G0030199.1 mouse_genomes_project 5 140703933 140737022 + Rasa4 protein_coding retained_intron MGP_129S1SvImJ_T0075016.1 MGP_129S1SvImJ_G0030199.1 mouse_genomes_project 5 140703933 140735128 + Rasa4 protein_coding retained_intron MGP_129S1SvImJ_T0075017.1 MGP_129S1SvImJ_G0030199.1 mouse_genomes_project 5 140703934 140715186 + Rasa4 protein_coding retained_intron MGP_129S1SvImJ_T0075018.1 MGP_129S1SvImJ_G0030199.1 mouse_genomes_project 5 140703953 140737022 + Rasa4 protein_coding retained_intron MGP_129S1SvImJ_T0075019.1 MGP_129S1SvImJ_G0030199.1 mouse_genomes_project 5 140703967 140737027 + MGP_129S1SvImJ_P0075019 Rasa4 protein_coding protein_coding MGP_129S1SvImJ_T0075020.1 MGP_129S1SvImJ_G0030199.1 mouse_genomes_project 5 140704024 140731029 + Rasa4 protein_coding retained_intron MGP_129S1SvImJ_T0075021.1 MGP_129S1SvImJ_G0030199.1 mouse_genomes_project 5 140705005 140713003 + Rasa4 protein_coding processed_transcript MGP_129S1SvImJ_T0075022.1 MGP_129S1SvImJ_G0030199.1 mouse_genomes_project 5 140712840 140714310 + Rasa4 protein_coding retained_intron MGP_129S1SvImJ_T0075023.1 MGP_129S1SvImJ_G0030199.1 mouse_genomes_project 5 140717634 140725813 + MGP_129S1SvImJ_P0075023 Rasa4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075024.1 MGP_129S1SvImJ_G0030199.1 mouse_genomes_project 5 140727411 140729551 + MGP_129S1SvImJ_P0075024 Rasa4 protein_coding protein_coding MGP_129S1SvImJ_T0075025.1 MGP_129S1SvImJ_G0030199.1 mouse_genomes_project 5 140736098 140736697 + Rasa4 protein_coding retained_intron MGP_129S1SvImJ_T0004869.1 MGP_129S1SvImJ_G0004193.1 mouse_genomes_project 5 138864423 138866464 + Gm42882 antisense antisense MGP_129S1SvImJ_T0071059.1 MGP_129S1SvImJ_G0029451.1 mouse_genomes_project 5 31846434 31866779 + MGP_129S1SvImJ_P0071059 Tacc3 protein_coding protein_coding MGP_129S1SvImJ_T0071060.1 MGP_129S1SvImJ_G0029451.1 mouse_genomes_project 5 31846434 31873573 + MGP_129S1SvImJ_P0071060 Tacc3 protein_coding protein_coding MGP_129S1SvImJ_T0071061.1 MGP_129S1SvImJ_G0029451.1 mouse_genomes_project 5 31846453 31860271 + MGP_129S1SvImJ_P0071061 Tacc3 protein_coding protein_coding MGP_129S1SvImJ_T0071062.1 MGP_129S1SvImJ_G0029451.1 mouse_genomes_project 5 31846860 31854083 + MGP_129S1SvImJ_P0071062 Tacc3 protein_coding protein_coding MGP_129S1SvImJ_T0071063.1 MGP_129S1SvImJ_G0029451.1 mouse_genomes_project 5 31846892 31866776 + MGP_129S1SvImJ_P0071063 Tacc3 protein_coding protein_coding MGP_129S1SvImJ_T0071064.1 MGP_129S1SvImJ_G0029451.1 mouse_genomes_project 5 31846940 31850318 + Tacc3 protein_coding retained_intron MGP_129S1SvImJ_T0071065.1 MGP_129S1SvImJ_G0029451.1 mouse_genomes_project 5 31861411 31866779 + MGP_129S1SvImJ_P0071065 Tacc3 protein_coding protein_coding MGP_129S1SvImJ_T0071066.1 MGP_129S1SvImJ_G0029451.1 mouse_genomes_project 5 31861474 31873563 + MGP_129S1SvImJ_P0071066 Tacc3 protein_coding protein_coding MGP_129S1SvImJ_T0008426.1 MGP_129S1SvImJ_G0006835.1 mouse_genomes_project 5 141921393 141932061 + lincRNA lincRNA MGP_129S1SvImJ_T0001498.1 MGP_129S1SvImJ_G0001418.1 mouse_genomes_project 5 23156814 23160834 + TEC TEC MGP_129S1SvImJ_T0011615.1 MGP_129S1SvImJ_G0009731.1 mouse_genomes_project 5 80099467 80099762 - Gm22553 misc_RNA misc_RNA MGP_129S1SvImJ_T0014876.1 MGP_129S1SvImJ_G0012965.1 mouse_genomes_project 5 6835000 6835964 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001711.1 MGP_129S1SvImJ_G0001626.1 mouse_genomes_project 5 74090865 74099947 - TEC TEC MGP_129S1SvImJ_T0072614.1 MGP_129S1SvImJ_G0029743.1 mouse_genomes_project 5 93297749 93368533 + MGP_129S1SvImJ_P0072614 Uso1 protein_coding protein_coding MGP_129S1SvImJ_T0072615.1 MGP_129S1SvImJ_G0029743.1 mouse_genomes_project 5 93297757 93368536 + MGP_129S1SvImJ_P0072615 Uso1 protein_coding protein_coding MGP_129S1SvImJ_T0072616.1 MGP_129S1SvImJ_G0029743.1 mouse_genomes_project 5 93297758 93346556 + Uso1 protein_coding retained_intron MGP_129S1SvImJ_T0072617.1 MGP_129S1SvImJ_G0029743.1 mouse_genomes_project 5 93297777 93368534 + MGP_129S1SvImJ_P0072617 Uso1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072618.1 MGP_129S1SvImJ_G0029743.1 mouse_genomes_project 5 93343889 93368513 + Uso1 protein_coding processed_transcript MGP_129S1SvImJ_T0004671.1 MGP_129S1SvImJ_G0004049.1 mouse_genomes_project 5 28476035 28488023 + Gm42765 antisense antisense MGP_129S1SvImJ_T0004672.1 MGP_129S1SvImJ_G0004049.1 mouse_genomes_project 5 28476078 28495442 + Gm42765 antisense antisense MGP_129S1SvImJ_T0073718.1 MGP_129S1SvImJ_G0029973.1 mouse_genomes_project 5 118457696 118465032 + MGP_129S1SvImJ_P0073718 Rplp0 protein_coding protein_coding MGP_129S1SvImJ_T0073719.1 MGP_129S1SvImJ_G0029973.1 mouse_genomes_project 5 118457766 118463874 + MGP_129S1SvImJ_P0073719 Rplp0 protein_coding protein_coding MGP_129S1SvImJ_T0073720.1 MGP_129S1SvImJ_G0029973.1 mouse_genomes_project 5 118457807 118462615 + MGP_129S1SvImJ_P0073720 Rplp0 protein_coding protein_coding MGP_129S1SvImJ_T0073721.1 MGP_129S1SvImJ_G0029973.1 mouse_genomes_project 5 118457852 118459309 + Rplp0 protein_coding retained_intron MGP_129S1SvImJ_T0014892.1 MGP_129S1SvImJ_G0012981.1 mouse_genomes_project 5 15771773 15772233 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072546.1 MGP_129S1SvImJ_G0029722.1 mouse_genomes_project 5 91570060 91590773 + MGP_129S1SvImJ_P0072546 Afp protein_coding protein_coding MGP_129S1SvImJ_T0072547.1 MGP_129S1SvImJ_G0029722.1 mouse_genomes_project 5 91570062 91577870 + MGP_129S1SvImJ_P0072547 Afp protein_coding protein_coding MGP_129S1SvImJ_T0072548.1 MGP_129S1SvImJ_G0029722.1 mouse_genomes_project 5 91571821 91577920 + Afp protein_coding retained_intron MGP_129S1SvImJ_T0072549.1 MGP_129S1SvImJ_G0029722.1 mouse_genomes_project 5 91583347 91585986 + Afp protein_coding retained_intron MGP_129S1SvImJ_T0072550.1 MGP_129S1SvImJ_G0029722.1 mouse_genomes_project 5 91589247 91590717 + Afp protein_coding retained_intron MGP_129S1SvImJ_T0075862.1 MGP_129S1SvImJ_G0030372.1 mouse_genomes_project 5 151447543 151531535 - MGP_129S1SvImJ_P0075862 Cyp3a25 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075863.1 MGP_129S1SvImJ_G0030372.1 mouse_genomes_project 5 151447545 151531534 - MGP_129S1SvImJ_P0075863 Cyp3a25 protein_coding protein_coding MGP_129S1SvImJ_T0075864.1 MGP_129S1SvImJ_G0030372.1 mouse_genomes_project 5 151447915 151531515 - MGP_129S1SvImJ_P0075864 Cyp3a25 protein_coding protein_coding MGP_129S1SvImJ_T0075865.1 MGP_129S1SvImJ_G0030372.1 mouse_genomes_project 5 151468681 151475439 - Cyp3a25 protein_coding processed_transcript MGP_129S1SvImJ_T0071623.1 MGP_129S1SvImJ_G0029540.1 mouse_genomes_project 5 47191824 47293334 - Kcnip4 protein_coding processed_transcript MGP_129S1SvImJ_T0071624.1 MGP_129S1SvImJ_G0029540.1 mouse_genomes_project 5 47191824 47406160 - MGP_129S1SvImJ_P0071624 Kcnip4 protein_coding protein_coding MGP_129S1SvImJ_T0071625.1 MGP_129S1SvImJ_G0029540.1 mouse_genomes_project 5 47191824 48387836 - MGP_129S1SvImJ_P0071625 Kcnip4 protein_coding protein_coding MGP_129S1SvImJ_T0071626.1 MGP_129S1SvImJ_G0029540.1 mouse_genomes_project 5 47191824 47721441 - MGP_129S1SvImJ_P0071626 Kcnip4 protein_coding protein_coding MGP_129S1SvImJ_T0071627.1 MGP_129S1SvImJ_G0029540.1 mouse_genomes_project 5 47191825 47302930 - Kcnip4 protein_coding processed_transcript MGP_129S1SvImJ_T0071628.1 MGP_129S1SvImJ_G0029540.1 mouse_genomes_project 5 47191829 48387693 - MGP_129S1SvImJ_P0071628 Kcnip4 protein_coding protein_coding MGP_129S1SvImJ_T0071629.1 MGP_129S1SvImJ_G0029540.1 mouse_genomes_project 5 47191834 48130187 - MGP_129S1SvImJ_P0071629 Kcnip4 protein_coding protein_coding MGP_129S1SvImJ_T0071461.1 MGP_129S1SvImJ_G0029513.1 mouse_genomes_project 5 36943411 36978396 - MGP_129S1SvImJ_P0071461 Wdr1 protein_coding protein_coding MGP_129S1SvImJ_T0071462.1 MGP_129S1SvImJ_G0029513.1 mouse_genomes_project 5 36944178 36946725 - Wdr1 protein_coding retained_intron MGP_129S1SvImJ_T0071463.1 MGP_129S1SvImJ_G0029513.1 mouse_genomes_project 5 36944319 36946613 - Wdr1 protein_coding retained_intron MGP_129S1SvImJ_T0071464.1 MGP_129S1SvImJ_G0029513.1 mouse_genomes_project 5 36945793 36946449 - Wdr1 protein_coding retained_intron MGP_129S1SvImJ_T0071465.1 MGP_129S1SvImJ_G0029513.1 mouse_genomes_project 5 36946566 36948595 - Wdr1 protein_coding processed_transcript MGP_129S1SvImJ_T0071466.1 MGP_129S1SvImJ_G0029513.1 mouse_genomes_project 5 36953717 36978121 - MGP_129S1SvImJ_P0071466 Wdr1 protein_coding protein_coding MGP_129S1SvImJ_T0071467.1 MGP_129S1SvImJ_G0029513.1 mouse_genomes_project 5 36956775 36978140 - Wdr1 protein_coding retained_intron MGP_129S1SvImJ_T0071468.1 MGP_129S1SvImJ_G0029513.1 mouse_genomes_project 5 36962264 36979811 - Wdr1 protein_coding processed_transcript MGP_129S1SvImJ_T0071469.1 MGP_129S1SvImJ_G0029513.1 mouse_genomes_project 5 36967811 36978396 - Wdr1 protein_coding retained_intron MGP_129S1SvImJ_T0071470.1 MGP_129S1SvImJ_G0029513.1 mouse_genomes_project 5 36974224 36978133 - Wdr1 protein_coding retained_intron MGP_129S1SvImJ_T0071471.1 MGP_129S1SvImJ_G0029513.1 mouse_genomes_project 5 36977498 36978165 - Wdr1 protein_coding retained_intron MGP_129S1SvImJ_T0098372.1 MGP_129S1SvImJ_G0036457.1 mouse_genomes_project 5 140486152 140487462 + pseudogene pseudogene MGP_129S1SvImJ_T0072998.1 MGP_129S1SvImJ_G0029829.1 mouse_genomes_project 5 108412169 108417793 - MGP_129S1SvImJ_P0072998 Barhl2 protein_coding protein_coding MGP_129S1SvImJ_T0073438.1 MGP_129S1SvImJ_G0029919.1 mouse_genomes_project 5 116281723 116321945 - MGP_129S1SvImJ_P0073438 Cmklr1 protein_coding protein_coding MGP_129S1SvImJ_T0073439.1 MGP_129S1SvImJ_G0029919.1 mouse_genomes_project 5 116282760 116299132 - MGP_129S1SvImJ_P0073439 Cmklr1 protein_coding protein_coding MGP_129S1SvImJ_T0073440.1 MGP_129S1SvImJ_G0029919.1 mouse_genomes_project 5 116283651 116315119 - MGP_129S1SvImJ_P0073440 Cmklr1 protein_coding protein_coding MGP_129S1SvImJ_T0073441.1 MGP_129S1SvImJ_G0029919.1 mouse_genomes_project 5 116302822 116321915 - Cmklr1 protein_coding processed_transcript MGP_129S1SvImJ_T0072726.1 MGP_129S1SvImJ_G0029764.1 mouse_genomes_project 5 97433046 97491152 + MGP_129S1SvImJ_P0072726 Mrpl1 protein_coding protein_coding MGP_129S1SvImJ_T0072727.1 MGP_129S1SvImJ_G0029764.1 mouse_genomes_project 5 97433668 97491134 + MGP_129S1SvImJ_P0072727 Mrpl1 protein_coding protein_coding MGP_129S1SvImJ_T0072728.1 MGP_129S1SvImJ_G0029764.1 mouse_genomes_project 5 97433697 97464157 + MGP_129S1SvImJ_P0072728 Mrpl1 protein_coding protein_coding MGP_129S1SvImJ_T0015067.1 MGP_129S1SvImJ_G0013156.1 mouse_genomes_project 5 83978673 83979541 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008494.1 MGP_129S1SvImJ_G0006888.1 mouse_genomes_project 5 157253463 157264705 + lincRNA lincRNA MGP_129S1SvImJ_T0015170.1 MGP_129S1SvImJ_G0013259.1 mouse_genomes_project 5 125932288 125932906 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004651.1 MGP_129S1SvImJ_G0004032.1 mouse_genomes_project 5 5751046 5781684 - Gm5106 antisense antisense MGP_129S1SvImJ_T0074012.1 MGP_129S1SvImJ_G0030034.1 mouse_genomes_project 5 125101175 125130668 - MGP_129S1SvImJ_P0074012 Acad12 protein_coding protein_coding MGP_129S1SvImJ_T0074013.1 MGP_129S1SvImJ_G0030034.1 mouse_genomes_project 5 125101305 125102380 - Acad12 protein_coding processed_transcript MGP_129S1SvImJ_T0074014.1 MGP_129S1SvImJ_G0030034.1 mouse_genomes_project 5 125112863 125130668 - MGP_129S1SvImJ_P0074014 Acad12 protein_coding protein_coding MGP_129S1SvImJ_T0074015.1 MGP_129S1SvImJ_G0030034.1 mouse_genomes_project 5 125115691 125130593 - MGP_129S1SvImJ_P0074015 Acad12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0101733.1 MGP_129S1SvImJ_G0039732.1 mouse_genomes_project 5 121668559 121689775 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101734.1 MGP_129S1SvImJ_G0039732.1 mouse_genomes_project 5 121689114 121689592 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0015047.1 MGP_129S1SvImJ_G0013136.1 mouse_genomes_project 5 73490643 73491550 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070072.1 MGP_129S1SvImJ_G0029274.1 mouse_genomes_project 5 2481059 2571387 - MGP_129S1SvImJ_P0070072 Cfap69 protein_coding protein_coding MGP_129S1SvImJ_T0070073.1 MGP_129S1SvImJ_G0029274.1 mouse_genomes_project 5 2481063 2571356 - MGP_129S1SvImJ_P0070073 Cfap69 protein_coding protein_coding MGP_129S1SvImJ_T0070074.1 MGP_129S1SvImJ_G0029274.1 mouse_genomes_project 5 2482772 2533960 - Cfap69 protein_coding processed_transcript MGP_129S1SvImJ_T0070075.1 MGP_129S1SvImJ_G0029274.1 mouse_genomes_project 5 2482828 2484292 - MGP_129S1SvImJ_P0070075 Cfap69 protein_coding protein_coding MGP_129S1SvImJ_T0070076.1 MGP_129S1SvImJ_G0029274.1 mouse_genomes_project 5 2482918 2488992 - MGP_129S1SvImJ_P0070076 Cfap69 protein_coding protein_coding MGP_129S1SvImJ_T0070077.1 MGP_129S1SvImJ_G0029274.1 mouse_genomes_project 5 2482961 2527940 - MGP_129S1SvImJ_P0070077 Cfap69 protein_coding protein_coding MGP_129S1SvImJ_T0070078.1 MGP_129S1SvImJ_G0029274.1 mouse_genomes_project 5 2488136 2571191 - MGP_129S1SvImJ_P0070078 Cfap69 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070079.1 MGP_129S1SvImJ_G0029274.1 mouse_genomes_project 5 2490955 2571356 - MGP_129S1SvImJ_P0070079 Cfap69 protein_coding protein_coding MGP_129S1SvImJ_T0070080.1 MGP_129S1SvImJ_G0029274.1 mouse_genomes_project 5 2495438 2571380 - MGP_129S1SvImJ_P0070080 Cfap69 protein_coding protein_coding MGP_129S1SvImJ_T0070081.1 MGP_129S1SvImJ_G0029274.1 mouse_genomes_project 5 2537483 2537857 - Cfap69 protein_coding retained_intron MGP_129S1SvImJ_T0070082.1 MGP_129S1SvImJ_G0029274.1 mouse_genomes_project 5 2553975 2571375 - Cfap69 protein_coding retained_intron MGP_129S1SvImJ_T0070083.1 MGP_129S1SvImJ_G0029274.1 mouse_genomes_project 5 2556953 2570441 - MGP_129S1SvImJ_P0070083 Cfap69 protein_coding protein_coding MGP_129S1SvImJ_T0015172.1 MGP_129S1SvImJ_G0013261.1 mouse_genomes_project 5 126342566 126342965 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004677.1 MGP_129S1SvImJ_G0004053.1 mouse_genomes_project 5 30064050 30068938 - Gm17130 antisense antisense MGP_129S1SvImJ_T0015171.1 MGP_129S1SvImJ_G0013260.1 mouse_genomes_project 5 126070281 126070601 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008379.1 MGP_129S1SvImJ_G0006808.1 mouse_genomes_project 5 129806067 129834278 + 1700048F04Rik lincRNA lincRNA MGP_129S1SvImJ_T0072466.1 MGP_129S1SvImJ_G0029696.1 mouse_genomes_project 5 88948445 88951857 + MGP_129S1SvImJ_P0072466 2310003L06Rik protein_coding protein_coding MGP_129S1SvImJ_T0073597.1 MGP_129S1SvImJ_G0029947.1 mouse_genomes_project 5 117585868 117603330 - MGP_129S1SvImJ_P0073597 Gm20499 protein_coding protein_coding MGP_129S1SvImJ_T0072842.1 MGP_129S1SvImJ_G0029789.1 mouse_genomes_project 5 102160475 102179997 - MGP_129S1SvImJ_P0072842 Coq2 protein_coding protein_coding MGP_129S1SvImJ_T0072843.1 MGP_129S1SvImJ_G0029789.1 mouse_genomes_project 5 102161010 102179912 - MGP_129S1SvImJ_P0072843 Coq2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072844.1 MGP_129S1SvImJ_G0029789.1 mouse_genomes_project 5 102163698 102180005 - MGP_129S1SvImJ_P0072844 Coq2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072845.1 MGP_129S1SvImJ_G0029790.1 mouse_genomes_project 5 102184764 102231254 - MGP_129S1SvImJ_P0072845 Hpse protein_coding protein_coding MGP_129S1SvImJ_T0072846.1 MGP_129S1SvImJ_G0029790.1 mouse_genomes_project 5 102190964 102231243 - MGP_129S1SvImJ_P0072846 Hpse protein_coding protein_coding MGP_129S1SvImJ_T0008471.1 MGP_129S1SvImJ_G0006874.1 mouse_genomes_project 5 154997061 154998088 + Gm43332 lincRNA lincRNA MGP_129S1SvImJ_T0069981.1 MGP_129S1SvImJ_G0029260.1 mouse_genomes_project 5 447161 458768 - MGP_129S1SvImJ_P0069981 Gatad1 protein_coding protein_coding MGP_129S1SvImJ_T0069985.1 MGP_129S1SvImJ_G0029260.1 mouse_genomes_project 5 457221 464843 - MGP_129S1SvImJ_P0069985 Gatad1 protein_coding protein_coding MGP_129S1SvImJ_T0069986.1 MGP_129S1SvImJ_G0029260.1 mouse_genomes_project 5 460304 465030 - MGP_129S1SvImJ_P0069986 Gatad1 protein_coding protein_coding MGP_129S1SvImJ_T0001611.1 MGP_129S1SvImJ_G0001528.1 mouse_genomes_project 5 50842891 50844120 - TEC TEC MGP_129S1SvImJ_T0074627.1 MGP_129S1SvImJ_G0030130.1 mouse_genomes_project 5 133840931 133879631 + MGP_129S1SvImJ_P0074627 Gbas protein_coding protein_coding MGP_129S1SvImJ_T0074628.1 MGP_129S1SvImJ_G0030130.1 mouse_genomes_project 5 133840967 133879554 + MGP_129S1SvImJ_P0074628 Gbas protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074629.1 MGP_129S1SvImJ_G0030130.1 mouse_genomes_project 5 133840969 133878674 + MGP_129S1SvImJ_P0074629 Gbas protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074630.1 MGP_129S1SvImJ_G0030130.1 mouse_genomes_project 5 133869370 133878503 + Gbas protein_coding retained_intron MGP_129S1SvImJ_T0074631.1 MGP_129S1SvImJ_G0030130.1 mouse_genomes_project 5 133869942 133871588 + Gbas protein_coding processed_transcript MGP_129S1SvImJ_T0071869.1 MGP_129S1SvImJ_G0029584.1 mouse_genomes_project 5 65561598 65596878 + MGP_129S1SvImJ_P0071869 Rhoh protein_coding protein_coding MGP_129S1SvImJ_T0071870.1 MGP_129S1SvImJ_G0029584.1 mouse_genomes_project 5 65563162 65593621 + MGP_129S1SvImJ_P0071870 Rhoh protein_coding protein_coding MGP_129S1SvImJ_T0071871.1 MGP_129S1SvImJ_G0029584.1 mouse_genomes_project 5 65563735 65568090 + Rhoh protein_coding processed_transcript MGP_129S1SvImJ_T0071872.1 MGP_129S1SvImJ_G0029584.1 mouse_genomes_project 5 65563773 65568550 + Rhoh protein_coding retained_intron MGP_129S1SvImJ_T0074658.1 MGP_129S1SvImJ_G0030137.1 mouse_genomes_project 5 134096142 134111289 - MGP_129S1SvImJ_P0074658 Gusb protein_coding protein_coding MGP_129S1SvImJ_T0074659.1 MGP_129S1SvImJ_G0030137.1 mouse_genomes_project 5 134096154 134111068 - MGP_129S1SvImJ_P0074659 Gusb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074660.1 MGP_129S1SvImJ_G0030137.1 mouse_genomes_project 5 134096712 134097774 - Gusb protein_coding retained_intron MGP_129S1SvImJ_T0074661.1 MGP_129S1SvImJ_G0030137.1 mouse_genomes_project 5 134106895 134111105 - MGP_129S1SvImJ_P0074661 Gusb protein_coding protein_coding MGP_129S1SvImJ_T0074662.1 MGP_129S1SvImJ_G0030137.1 mouse_genomes_project 5 134107835 134111121 - MGP_129S1SvImJ_P0074662 Gusb protein_coding protein_coding MGP_129S1SvImJ_T0074663.1 MGP_129S1SvImJ_G0030137.1 mouse_genomes_project 5 134107858 134111205 - Gusb protein_coding retained_intron MGP_129S1SvImJ_T0075190.1 MGP_129S1SvImJ_G0030231.1 mouse_genomes_project 5 142323351 142333949 + MGP_129S1SvImJ_P0075190 Actl6b protein_coding protein_coding MGP_129S1SvImJ_T0075191.1 MGP_129S1SvImJ_G0030231.1 mouse_genomes_project 5 142323372 142324181 + Actl6b protein_coding retained_intron MGP_129S1SvImJ_T0075192.1 MGP_129S1SvImJ_G0030231.1 mouse_genomes_project 5 142323372 142337233 + MGP_129S1SvImJ_P0075192 Actl6b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075193.1 MGP_129S1SvImJ_G0030231.1 mouse_genomes_project 5 142323373 142336383 + MGP_129S1SvImJ_P0075193 Actl6b protein_coding protein_coding MGP_129S1SvImJ_T0075194.1 MGP_129S1SvImJ_G0030231.1 mouse_genomes_project 5 142323389 142324867 + MGP_129S1SvImJ_P0075194 Actl6b protein_coding protein_coding MGP_129S1SvImJ_T0075195.1 MGP_129S1SvImJ_G0030231.1 mouse_genomes_project 5 142323391 142326491 + Actl6b protein_coding retained_intron MGP_129S1SvImJ_T0075196.1 MGP_129S1SvImJ_G0030231.1 mouse_genomes_project 5 142323391 142340133 + MGP_129S1SvImJ_P0075196 Actl6b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075197.1 MGP_129S1SvImJ_G0030231.1 mouse_genomes_project 5 142323469 142339963 + MGP_129S1SvImJ_P0075197 Actl6b protein_coding protein_coding MGP_129S1SvImJ_T0072555.1 MGP_129S1SvImJ_G0029725.1 mouse_genomes_project 5 91682059 91724990 - MGP_129S1SvImJ_P0072555 Rassf6 protein_coding protein_coding MGP_129S1SvImJ_T0072556.1 MGP_129S1SvImJ_G0029725.1 mouse_genomes_project 5 91682059 91724990 - MGP_129S1SvImJ_P0072556 Rassf6 protein_coding protein_coding MGP_129S1SvImJ_T0072557.1 MGP_129S1SvImJ_G0029725.1 mouse_genomes_project 5 91682606 91689032 - MGP_129S1SvImJ_P0072557 Rassf6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072558.1 MGP_129S1SvImJ_G0029725.1 mouse_genomes_project 5 91682814 91725157 - MGP_129S1SvImJ_P0072558 Rassf6 protein_coding protein_coding MGP_129S1SvImJ_T0072559.1 MGP_129S1SvImJ_G0029725.1 mouse_genomes_project 5 91696834 91725128 - MGP_129S1SvImJ_P0072559 Rassf6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072560.1 MGP_129S1SvImJ_G0029725.1 mouse_genomes_project 5 91701371 91725027 - MGP_129S1SvImJ_P0072560 Rassf6 protein_coding protein_coding MGP_129S1SvImJ_T0072561.1 MGP_129S1SvImJ_G0029725.1 mouse_genomes_project 5 91722974 91725155 - Rassf6 protein_coding processed_transcript MGP_129S1SvImJ_T0004718.1 MGP_129S1SvImJ_G0004086.1 mouse_genomes_project 5 65244907 65250639 - Gm42726 antisense antisense MGP_129S1SvImJ_T0004914.1 MGP_129S1SvImJ_G0004224.1 mouse_genomes_project 5 155245646 155249112 - Gm43150 antisense antisense MGP_129S1SvImJ_T0074221.1 MGP_129S1SvImJ_G0030061.1 mouse_genomes_project 5 126693878 126708970 + MGP_129S1SvImJ_P0074221 Orai1 protein_coding protein_coding MGP_129S1SvImJ_T0074222.1 MGP_129S1SvImJ_G0030061.1 mouse_genomes_project 5 126693878 126709270 + MGP_129S1SvImJ_P0074222 Orai1 protein_coding protein_coding MGP_129S1SvImJ_T0074223.1 MGP_129S1SvImJ_G0030061.1 mouse_genomes_project 5 126694142 126708304 + Orai1 protein_coding processed_transcript MGP_129S1SvImJ_T0098950.1 MGP_129S1SvImJ_G0037028.1 mouse_genomes_project 5 28295813 28296258 + Gm43755 sense_intronic sense_intronic MGP_129S1SvImJ_T0074094.1 MGP_129S1SvImJ_G0030044.1 mouse_genomes_project 5 125824511 125856655 + MGP_129S1SvImJ_P0074094 Hvcn1 protein_coding protein_coding MGP_129S1SvImJ_T0074095.1 MGP_129S1SvImJ_G0030044.1 mouse_genomes_project 5 125827438 125865415 + MGP_129S1SvImJ_P0074095 Hvcn1 protein_coding protein_coding MGP_129S1SvImJ_T0074096.1 MGP_129S1SvImJ_G0030044.1 mouse_genomes_project 5 125827618 125861624 + MGP_129S1SvImJ_P0074096 Hvcn1 protein_coding protein_coding MGP_129S1SvImJ_T0074097.1 MGP_129S1SvImJ_G0030044.1 mouse_genomes_project 5 125827822 125860886 + MGP_129S1SvImJ_P0074097 Hvcn1 protein_coding protein_coding MGP_129S1SvImJ_T0074098.1 MGP_129S1SvImJ_G0030044.1 mouse_genomes_project 5 125827843 125865415 + MGP_129S1SvImJ_P0074098 Hvcn1 protein_coding protein_coding MGP_129S1SvImJ_T0010688.1 MGP_129S1SvImJ_G0008804.1 mouse_genomes_project 5 28154099 28154177 + Mir1960 miRNA miRNA MGP_129S1SvImJ_T0072407.1 MGP_129S1SvImJ_G0029683.1 mouse_genomes_project 5 88382888 88415795 - MGP_129S1SvImJ_P0072407 protein_coding protein_coding MGP_129S1SvImJ_T0071957.1 MGP_129S1SvImJ_G0029594.1 mouse_genomes_project 5 67080701 67131935 + MGP_129S1SvImJ_P0071957 Slc30a9 protein_coding protein_coding MGP_129S1SvImJ_T0071958.1 MGP_129S1SvImJ_G0029594.1 mouse_genomes_project 5 67080701 67131932 + MGP_129S1SvImJ_P0071958 Slc30a9 protein_coding protein_coding MGP_129S1SvImJ_T0071959.1 MGP_129S1SvImJ_G0029594.1 mouse_genomes_project 5 67080710 67083505 + Slc30a9 protein_coding retained_intron MGP_129S1SvImJ_T0071960.1 MGP_129S1SvImJ_G0029594.1 mouse_genomes_project 5 67080711 67129278 + MGP_129S1SvImJ_P0071960 Slc30a9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071961.1 MGP_129S1SvImJ_G0029594.1 mouse_genomes_project 5 67080930 67092642 + Slc30a9 protein_coding processed_transcript MGP_129S1SvImJ_T0071962.1 MGP_129S1SvImJ_G0029594.1 mouse_genomes_project 5 67089449 67115727 + MGP_129S1SvImJ_P0071962 Slc30a9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071963.1 MGP_129S1SvImJ_G0029594.1 mouse_genomes_project 5 67089475 67102488 + MGP_129S1SvImJ_P0071963 Slc30a9 protein_coding protein_coding MGP_129S1SvImJ_T0071964.1 MGP_129S1SvImJ_G0029594.1 mouse_genomes_project 5 67106101 67126848 + Slc30a9 protein_coding retained_intron MGP_129S1SvImJ_T0008449.1 MGP_129S1SvImJ_G0006855.1 mouse_genomes_project 5 152178677 152192124 - Gm34333 lincRNA lincRNA MGP_129S1SvImJ_T0071571.1 MGP_129S1SvImJ_G0029534.1 mouse_genomes_project 5 44225943 44234972 + MGP_129S1SvImJ_P0071571 Med28 protein_coding protein_coding MGP_129S1SvImJ_T0071572.1 MGP_129S1SvImJ_G0029534.1 mouse_genomes_project 5 44225974 44234724 + MGP_129S1SvImJ_P0071572 Med28 protein_coding protein_coding MGP_129S1SvImJ_T0071573.1 MGP_129S1SvImJ_G0029534.1 mouse_genomes_project 5 44226655 44234979 + Med28 protein_coding processed_transcript MGP_129S1SvImJ_T0071574.1 MGP_129S1SvImJ_G0029534.1 mouse_genomes_project 5 44227788 44234552 + Med28 protein_coding retained_intron MGP_129S1SvImJ_T0001822.1 MGP_129S1SvImJ_G0001737.1 mouse_genomes_project 5 124880132 124881998 + TEC TEC MGP_129S1SvImJ_T0001883.1 MGP_129S1SvImJ_G0001797.1 mouse_genomes_project 5 136258178 136260413 - TEC TEC MGP_129S1SvImJ_T0075488.1 MGP_129S1SvImJ_G0030289.1 mouse_genomes_project 5 144765356 144789798 - MGP_129S1SvImJ_P0075488 Ints1 protein_coding protein_coding MGP_129S1SvImJ_T0075489.1 MGP_129S1SvImJ_G0030289.1 mouse_genomes_project 5 144765359 144768933 - Ints1 protein_coding retained_intron MGP_129S1SvImJ_T0075490.1 MGP_129S1SvImJ_G0030289.1 mouse_genomes_project 5 144765359 144789763 - MGP_129S1SvImJ_P0075490 Ints1 protein_coding protein_coding MGP_129S1SvImJ_T0075491.1 MGP_129S1SvImJ_G0030289.1 mouse_genomes_project 5 144765360 144769053 - MGP_129S1SvImJ_P0075491 Ints1 protein_coding protein_coding MGP_129S1SvImJ_T0075492.1 MGP_129S1SvImJ_G0030289.1 mouse_genomes_project 5 144775661 144776570 - Ints1 protein_coding retained_intron MGP_129S1SvImJ_T0075493.1 MGP_129S1SvImJ_G0030289.1 mouse_genomes_project 5 144779158 144781973 - Ints1 protein_coding retained_intron MGP_129S1SvImJ_T0075494.1 MGP_129S1SvImJ_G0030289.1 mouse_genomes_project 5 144781172 144789799 - Ints1 protein_coding retained_intron MGP_129S1SvImJ_T0075495.1 MGP_129S1SvImJ_G0030289.1 mouse_genomes_project 5 144781498 144782529 - Ints1 protein_coding retained_intron MGP_129S1SvImJ_T0075496.1 MGP_129S1SvImJ_G0030289.1 mouse_genomes_project 5 144783445 144785803 - Ints1 protein_coding retained_intron MGP_129S1SvImJ_T0075497.1 MGP_129S1SvImJ_G0030289.1 mouse_genomes_project 5 144786689 144789799 - MGP_129S1SvImJ_P0075497 Ints1 protein_coding protein_coding MGP_129S1SvImJ_T0001693.1 MGP_129S1SvImJ_G0001609.1 mouse_genomes_project 5 69019061 69020092 - TEC TEC MGP_129S1SvImJ_T0018226.1 MGP_129S1SvImJ_G0015615.1 mouse_genomes_project 5 133908536 133920986 + processed_transcript processed_transcript MGP_129S1SvImJ_T0018227.1 MGP_129S1SvImJ_G0015615.1 mouse_genomes_project 5 133908977 133920431 + processed_transcript processed_transcript MGP_129S1SvImJ_T0018228.1 MGP_129S1SvImJ_G0015615.1 mouse_genomes_project 5 133911216 133913372 + processed_transcript retained_intron MGP_129S1SvImJ_T0018229.1 MGP_129S1SvImJ_G0015615.1 mouse_genomes_project 5 133914472 133915775 + processed_transcript retained_intron MGP_129S1SvImJ_T0018230.1 MGP_129S1SvImJ_G0015615.1 mouse_genomes_project 5 133915849 133920476 + processed_transcript processed_transcript MGP_129S1SvImJ_T0018231.1 MGP_129S1SvImJ_G0015615.1 mouse_genomes_project 5 133919583 133920593 + processed_transcript processed_transcript MGP_129S1SvImJ_T0073682.1 MGP_129S1SvImJ_G0029968.1 mouse_genomes_project 5 118196594 118200884 - MGP_129S1SvImJ_P0073682 Cox6a1 protein_coding protein_coding MGP_129S1SvImJ_T0073683.1 MGP_129S1SvImJ_G0029968.1 mouse_genomes_project 5 118196609 118200817 - Cox6a1 protein_coding retained_intron MGP_129S1SvImJ_T0075980.1 MGP_129S1SvImJ_G0030396.1 mouse_genomes_project 5 154245892 154295666 - MGP_129S1SvImJ_P0075980 Ubl3 protein_coding protein_coding MGP_129S1SvImJ_T0075981.1 MGP_129S1SvImJ_G0030396.1 mouse_genomes_project 5 154246387 154295793 - MGP_129S1SvImJ_P0075981 Ubl3 protein_coding protein_coding MGP_129S1SvImJ_T0075982.1 MGP_129S1SvImJ_G0030396.1 mouse_genomes_project 5 154246400 154295793 - MGP_129S1SvImJ_P0075982 Ubl3 protein_coding protein_coding MGP_129S1SvImJ_T0075983.1 MGP_129S1SvImJ_G0030396.1 mouse_genomes_project 5 154247236 154280581 - Ubl3 protein_coding processed_transcript MGP_129S1SvImJ_T0075984.1 MGP_129S1SvImJ_G0030396.1 mouse_genomes_project 5 154250532 154294665 - Ubl3 protein_coding processed_transcript MGP_129S1SvImJ_T0075985.1 MGP_129S1SvImJ_G0030396.1 mouse_genomes_project 5 154250542 154294657 - Ubl3 protein_coding processed_transcript MGP_129S1SvImJ_T0075986.1 MGP_129S1SvImJ_G0030396.1 mouse_genomes_project 5 154289573 154295702 - Ubl3 protein_coding retained_intron MGP_129S1SvImJ_T0001463.1 MGP_129S1SvImJ_G0001384.1 mouse_genomes_project 5 5817922 5818223 + TEC TEC MGP_129S1SvImJ_T0004726.1 MGP_129S1SvImJ_G0004093.1 mouse_genomes_project 5 67199612 67209897 + Gm26756 antisense antisense MGP_129S1SvImJ_T0072404.1 MGP_129S1SvImJ_G0029680.1 mouse_genomes_project 5 88128123 88142197 - MGP_129S1SvImJ_P0072404 Ugt2b37 protein_coding protein_coding MGP_129S1SvImJ_T0015179.1 MGP_129S1SvImJ_G0013268.1 mouse_genomes_project 5 129908856 129909389 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011614.1 MGP_129S1SvImJ_G0009730.1 mouse_genomes_project 5 66054275 66054598 - Gm23183 misc_RNA misc_RNA MGP_129S1SvImJ_T0001927.1 MGP_129S1SvImJ_G0001840.1 mouse_genomes_project 5 155212796 155214434 + TEC TEC MGP_129S1SvImJ_T0071523.1 MGP_129S1SvImJ_G0029527.1 mouse_genomes_project 5 42618056 42620978 - MGP_129S1SvImJ_P0071523 Fgfbp1 protein_coding protein_coding MGP_129S1SvImJ_T0071524.1 MGP_129S1SvImJ_G0029527.1 mouse_genomes_project 5 42618058 42620963 - MGP_129S1SvImJ_P0071524 Fgfbp1 protein_coding protein_coding MGP_129S1SvImJ_T0071525.1 MGP_129S1SvImJ_G0029527.1 mouse_genomes_project 5 42618061 42620252 - MGP_129S1SvImJ_P0071525 Fgfbp1 protein_coding protein_coding MGP_129S1SvImJ_T0075483.1 MGP_129S1SvImJ_G0030287.1 mouse_genomes_project 5 144538064 144542707 + MGP_129S1SvImJ_P0075483 Uncx protein_coding protein_coding MGP_129S1SvImJ_T0075484.1 MGP_129S1SvImJ_G0030287.1 mouse_genomes_project 5 144538468 144539839 + MGP_129S1SvImJ_P0075484 Uncx protein_coding protein_coding MGP_129S1SvImJ_T0099949.1 MGP_129S1SvImJ_G0038016.1 mouse_genomes_project 5 105296684 105296855 + Gm25721 snRNA snRNA MGP_129S1SvImJ_T0072644.1 MGP_129S1SvImJ_G0029750.1 mouse_genomes_project 5 93530796 93533055 - Cxcl10 protein_coding retained_intron MGP_129S1SvImJ_T0072645.1 MGP_129S1SvImJ_G0029750.1 mouse_genomes_project 5 93530796 93533070 - MGP_129S1SvImJ_P0072645 Cxcl10 protein_coding protein_coding MGP_129S1SvImJ_T0072646.1 MGP_129S1SvImJ_G0029750.1 mouse_genomes_project 5 93530963 93533077 - MGP_129S1SvImJ_P0072646 Cxcl10 protein_coding protein_coding MGP_129S1SvImJ_T0072647.1 MGP_129S1SvImJ_G0029750.1 mouse_genomes_project 5 93532188 93533070 - Cxcl10 protein_coding retained_intron MGP_129S1SvImJ_T0099909.1 MGP_129S1SvImJ_G0037976.1 mouse_genomes_project 5 28461123 28461230 - Gm25666 snRNA snRNA MGP_129S1SvImJ_T0074887.1 MGP_129S1SvImJ_G0030173.1 mouse_genomes_project 5 139571466 139576807 - MGP_129S1SvImJ_P0074887 Vps37d protein_coding protein_coding MGP_129S1SvImJ_T0074888.1 MGP_129S1SvImJ_G0030173.1 mouse_genomes_project 5 139571469 139576807 - MGP_129S1SvImJ_P0074888 Vps37d protein_coding protein_coding MGP_129S1SvImJ_T0008147.1 MGP_129S1SvImJ_G0006644.1 mouse_genomes_project 5 52398851 52411844 - Gm42745 lincRNA lincRNA MGP_129S1SvImJ_T0075173.1 MGP_129S1SvImJ_G0030227.1 mouse_genomes_project 5 142242173 142244971 - MGP_129S1SvImJ_P0075173 Epo protein_coding protein_coding MGP_129S1SvImJ_T0075174.1 MGP_129S1SvImJ_G0030227.1 mouse_genomes_project 5 142242173 142301324 - MGP_129S1SvImJ_P0075174 Epo protein_coding protein_coding MGP_129S1SvImJ_T0075175.1 MGP_129S1SvImJ_G0030227.1 mouse_genomes_project 5 142242179 142244971 - MGP_129S1SvImJ_P0075175 Epo protein_coding protein_coding MGP_129S1SvImJ_T0101198.1 MGP_129S1SvImJ_G0039265.1 mouse_genomes_project 5 79188752 79188888 + Gm25756 snoRNA snoRNA MGP_129S1SvImJ_T0070136.1 MGP_129S1SvImJ_G0029283.1 mouse_genomes_project 5 5351762 5377673 - MGP_129S1SvImJ_P0070136 Dbf4 protein_coding protein_coding MGP_129S1SvImJ_T0070137.1 MGP_129S1SvImJ_G0029283.1 mouse_genomes_project 5 5351800 5377709 - MGP_129S1SvImJ_P0070137 Dbf4 protein_coding protein_coding MGP_129S1SvImJ_T0070138.1 MGP_129S1SvImJ_G0029283.1 mouse_genomes_project 5 5351943 5377575 - MGP_129S1SvImJ_P0070138 Dbf4 protein_coding protein_coding MGP_129S1SvImJ_T0070139.1 MGP_129S1SvImJ_G0029283.1 mouse_genomes_project 5 5352641 5355307 - Dbf4 protein_coding retained_intron MGP_129S1SvImJ_T0070141.1 MGP_129S1SvImJ_G0029283.1 mouse_genomes_project 5 5356638 5377674 - Dbf4 protein_coding retained_intron MGP_129S1SvImJ_T0070142.1 MGP_129S1SvImJ_G0029283.1 mouse_genomes_project 5 5358090 5360192 - Dbf4 protein_coding retained_intron MGP_129S1SvImJ_T0070143.1 MGP_129S1SvImJ_G0029283.1 mouse_genomes_project 5 5373393 5377687 - Dbf4 protein_coding processed_transcript MGP_129S1SvImJ_T0070144.1 MGP_129S1SvImJ_G0029283.1 mouse_genomes_project 5 5377176 5377662 - Dbf4 protein_coding retained_intron MGP_129S1SvImJ_T0070097.1 MGP_129S1SvImJ_G0029278.1 mouse_genomes_project 5 4276953 4277326 + 4921511H03Rik protein_coding processed_transcript MGP_129S1SvImJ_T0070098.1 MGP_129S1SvImJ_G0029278.1 mouse_genomes_project 5 4276959 4284326 + MGP_129S1SvImJ_P0070098 4921511H03Rik protein_coding protein_coding MGP_129S1SvImJ_T0070099.1 MGP_129S1SvImJ_G0029278.1 mouse_genomes_project 5 4276966 4280408 + MGP_129S1SvImJ_P0070099 4921511H03Rik protein_coding protein_coding MGP_129S1SvImJ_T0070100.1 MGP_129S1SvImJ_G0029278.1 mouse_genomes_project 5 4276980 4278644 + MGP_129S1SvImJ_P0070100 4921511H03Rik protein_coding protein_coding MGP_129S1SvImJ_T0073079.1 MGP_129S1SvImJ_G0029845.1 mouse_genomes_project 5 109792677 109931144 - MGP_129S1SvImJ_P0073079 Evi5 protein_coding protein_coding MGP_129S1SvImJ_T0073080.1 MGP_129S1SvImJ_G0029845.1 mouse_genomes_project 5 109795158 109863535 - Evi5 protein_coding retained_intron MGP_129S1SvImJ_T0073081.1 MGP_129S1SvImJ_G0029845.1 mouse_genomes_project 5 109814174 109853304 - Evi5 protein_coding retained_intron MGP_129S1SvImJ_T0073082.1 MGP_129S1SvImJ_G0029845.1 mouse_genomes_project 5 109840736 109925204 - MGP_129S1SvImJ_P0073082 Evi5 protein_coding protein_coding MGP_129S1SvImJ_T0073083.1 MGP_129S1SvImJ_G0029845.1 mouse_genomes_project 5 109867654 109925204 - MGP_129S1SvImJ_P0073083 Evi5 protein_coding protein_coding MGP_129S1SvImJ_T0073084.1 MGP_129S1SvImJ_G0029845.1 mouse_genomes_project 5 109869240 109870889 - Evi5 protein_coding retained_intron MGP_129S1SvImJ_T0073085.1 MGP_129S1SvImJ_G0029845.1 mouse_genomes_project 5 109869690 109931081 - Evi5 protein_coding processed_transcript MGP_129S1SvImJ_T0073086.1 MGP_129S1SvImJ_G0029845.1 mouse_genomes_project 5 109869690 109931096 - MGP_129S1SvImJ_P0073086 Evi5 protein_coding protein_coding MGP_129S1SvImJ_T0073087.1 MGP_129S1SvImJ_G0029845.1 mouse_genomes_project 5 109873611 109891720 - Evi5 protein_coding retained_intron MGP_129S1SvImJ_T0073088.1 MGP_129S1SvImJ_G0029845.1 mouse_genomes_project 5 109873647 109924424 - MGP_129S1SvImJ_P0073088 Evi5 protein_coding protein_coding MGP_129S1SvImJ_T0073089.1 MGP_129S1SvImJ_G0029845.1 mouse_genomes_project 5 109875239 109924935 - Evi5 protein_coding processed_transcript MGP_129S1SvImJ_T0073091.1 MGP_129S1SvImJ_G0029845.1 mouse_genomes_project 5 109905148 109931093 - Evi5 protein_coding processed_transcript MGP_129S1SvImJ_T0073092.1 MGP_129S1SvImJ_G0029845.1 mouse_genomes_project 5 109928665 109931089 - Evi5 protein_coding processed_transcript MGP_129S1SvImJ_T0015234.1 MGP_129S1SvImJ_G0013323.1 mouse_genomes_project 5 153076641 153077101 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001893.1 MGP_129S1SvImJ_G0001807.1 mouse_genomes_project 5 137091148 137091436 + TEC TEC MGP_129S1SvImJ_T0008246.1 MGP_129S1SvImJ_G0006722.1 mouse_genomes_project 5 103276505 103279561 + Gm43270 lincRNA lincRNA MGP_129S1SvImJ_T0072132.1 MGP_129S1SvImJ_G0029627.1 mouse_genomes_project 5 73620821 73646707 - MGP_129S1SvImJ_P0072132 Lrrc66 protein_coding protein_coding MGP_129S1SvImJ_T0072133.1 MGP_129S1SvImJ_G0029627.1 mouse_genomes_project 5 73643857 73644494 - MGP_129S1SvImJ_P0072133 Lrrc66 protein_coding protein_coding MGP_129S1SvImJ_T0098612.1 MGP_129S1SvImJ_G0036697.1 mouse_genomes_project 5 138819939 138820053 + n-R5s178 rRNA rRNA MGP_129S1SvImJ_T0071873.1 MGP_129S1SvImJ_G0029585.1 mouse_genomes_project 5 65637082 65672049 + MGP_129S1SvImJ_P0071873 Chrna9 protein_coding protein_coding MGP_129S1SvImJ_T0071874.1 MGP_129S1SvImJ_G0029585.1 mouse_genomes_project 5 65637089 65674127 + MGP_129S1SvImJ_P0071874 Chrna9 protein_coding protein_coding MGP_129S1SvImJ_T0071875.1 MGP_129S1SvImJ_G0029585.1 mouse_genomes_project 5 65637109 65638076 + Chrna9 protein_coding retained_intron MGP_129S1SvImJ_T0071876.1 MGP_129S1SvImJ_G0029585.1 mouse_genomes_project 5 65637134 65646916 + Chrna9 protein_coding processed_transcript MGP_129S1SvImJ_T0071877.1 MGP_129S1SvImJ_G0029585.1 mouse_genomes_project 5 65637136 65646932 + Chrna9 protein_coding processed_transcript MGP_129S1SvImJ_T0071878.1 MGP_129S1SvImJ_G0029585.1 mouse_genomes_project 5 65669568 65680164 + MGP_129S1SvImJ_P0071878 Chrna9 protein_coding protein_coding MGP_129S1SvImJ_T0071879.1 MGP_129S1SvImJ_G0029585.1 mouse_genomes_project 5 65678733 65679978 + Chrna9 protein_coding processed_transcript MGP_129S1SvImJ_T0014934.1 MGP_129S1SvImJ_G0013023.1 mouse_genomes_project 5 24682294 24682700 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008162.1 MGP_129S1SvImJ_G0006656.1 mouse_genomes_project 5 64184469 64201313 - Gm3716 lincRNA lincRNA MGP_129S1SvImJ_T0008163.1 MGP_129S1SvImJ_G0006656.1 mouse_genomes_project 5 64185840 64193773 - Gm3716 lincRNA lincRNA MGP_129S1SvImJ_T0004863.1 MGP_129S1SvImJ_G0004187.1 mouse_genomes_project 5 132336782 132342783 + Gm42817 antisense antisense MGP_129S1SvImJ_T0075122.1 MGP_129S1SvImJ_G0030217.1 mouse_genomes_project 5 141836716 141847272 - MGP_129S1SvImJ_P0075122 Trim56 protein_coding protein_coding MGP_129S1SvImJ_T0075123.1 MGP_129S1SvImJ_G0030217.1 mouse_genomes_project 5 141845088 141847274 - MGP_129S1SvImJ_P0075123 Trim56 protein_coding protein_coding MGP_129S1SvImJ_T0075178.1 MGP_129S1SvImJ_G0030229.1 mouse_genomes_project 5 142276236 142293630 + MGP_129S1SvImJ_P0075178 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0075179.1 MGP_129S1SvImJ_G0030229.1 mouse_genomes_project 5 142284259 142286088 + MGP_129S1SvImJ_P0075179 protein_coding protein_coding MGP_129S1SvImJ_T0014938.1 MGP_129S1SvImJ_G0013027.1 mouse_genomes_project 5 25700346 25701328 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070824.1 MGP_129S1SvImJ_G0029415.1 mouse_genomes_project 5 29176198 29182007 - MGP_129S1SvImJ_P0070824 Eif2b4 protein_coding protein_coding MGP_129S1SvImJ_T0070825.1 MGP_129S1SvImJ_G0029415.1 mouse_genomes_project 5 29176199 29181716 - MGP_129S1SvImJ_P0070825 Eif2b4 protein_coding protein_coding MGP_129S1SvImJ_T0070826.1 MGP_129S1SvImJ_G0029415.1 mouse_genomes_project 5 29176207 29181585 - MGP_129S1SvImJ_P0070826 Eif2b4 protein_coding protein_coding MGP_129S1SvImJ_T0070827.1 MGP_129S1SvImJ_G0029415.1 mouse_genomes_project 5 29176208 29181591 - MGP_129S1SvImJ_P0070827 Eif2b4 protein_coding protein_coding MGP_129S1SvImJ_T0070828.1 MGP_129S1SvImJ_G0029415.1 mouse_genomes_project 5 29176209 29180217 - MGP_129S1SvImJ_P0070828 Eif2b4 protein_coding protein_coding MGP_129S1SvImJ_T0070829.1 MGP_129S1SvImJ_G0029415.1 mouse_genomes_project 5 29177971 29179431 - Eif2b4 protein_coding retained_intron MGP_129S1SvImJ_T0070830.1 MGP_129S1SvImJ_G0029415.1 mouse_genomes_project 5 29178138 29178486 - MGP_129S1SvImJ_P0070830 Eif2b4 protein_coding protein_coding MGP_129S1SvImJ_T0070831.1 MGP_129S1SvImJ_G0029415.1 mouse_genomes_project 5 29178158 29179721 - MGP_129S1SvImJ_P0070831 Eif2b4 protein_coding protein_coding MGP_129S1SvImJ_T0070832.1 MGP_129S1SvImJ_G0029415.1 mouse_genomes_project 5 29178967 29179769 - MGP_129S1SvImJ_P0070832 Eif2b4 protein_coding protein_coding MGP_129S1SvImJ_T0070833.1 MGP_129S1SvImJ_G0029415.1 mouse_genomes_project 5 29179769 29181716 - Eif2b4 protein_coding processed_transcript MGP_129S1SvImJ_T0070834.1 MGP_129S1SvImJ_G0029415.1 mouse_genomes_project 5 29179899 29181576 - Eif2b4 protein_coding retained_intron MGP_129S1SvImJ_T0070835.1 MGP_129S1SvImJ_G0029415.1 mouse_genomes_project 5 29180287 29181995 - MGP_129S1SvImJ_P0070835 Eif2b4 protein_coding protein_coding MGP_129S1SvImJ_T0008049.1 MGP_129S1SvImJ_G0006575.1 mouse_genomes_project 5 3347769 3356290 + Gm43325 lincRNA lincRNA MGP_129S1SvImJ_T0004918.1 MGP_129S1SvImJ_G0004228.1 mouse_genomes_project 5 156502794 156508953 - Gm42529 antisense antisense MGP_129S1SvImJ_T0071965.1 MGP_129S1SvImJ_G0029595.1 mouse_genomes_project 5 67162368 67199732 - MGP_129S1SvImJ_P0071965 Bend4 protein_coding protein_coding MGP_129S1SvImJ_T0071966.1 MGP_129S1SvImJ_G0029595.1 mouse_genomes_project 5 67162369 67199550 - MGP_129S1SvImJ_P0071966 Bend4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071967.1 MGP_129S1SvImJ_G0029595.1 mouse_genomes_project 5 67162369 67199550 - MGP_129S1SvImJ_P0071967 Bend4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071968.1 MGP_129S1SvImJ_G0029595.1 mouse_genomes_project 5 67162369 67199263 - MGP_129S1SvImJ_P0071968 Bend4 protein_coding protein_coding MGP_129S1SvImJ_T0071969.1 MGP_129S1SvImJ_G0029595.1 mouse_genomes_project 5 67162369 67200243 - MGP_129S1SvImJ_P0071969 Bend4 protein_coding protein_coding MGP_129S1SvImJ_T0014964.1 MGP_129S1SvImJ_G0013053.1 mouse_genomes_project 5 32299216 32299547 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073553.1 MGP_129S1SvImJ_G0029940.1 mouse_genomes_project 5 117329966 117377010 + MGP_129S1SvImJ_P0073553 Fam222a protein_coding protein_coding MGP_129S1SvImJ_T0073554.1 MGP_129S1SvImJ_G0029940.1 mouse_genomes_project 5 117329967 117358493 + Fam222a protein_coding processed_transcript MGP_129S1SvImJ_T0001882.1 MGP_129S1SvImJ_G0001796.1 mouse_genomes_project 5 136248533 136255369 - TEC TEC MGP_129S1SvImJ_T0001500.1 MGP_129S1SvImJ_G0001420.1 mouse_genomes_project 5 25060524 25063431 + TEC TEC MGP_129S1SvImJ_T0015143.1 MGP_129S1SvImJ_G0013232.1 mouse_genomes_project 5 111850864 111852881 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015152.1 MGP_129S1SvImJ_G0013241.1 mouse_genomes_project 5 116500790 116501158 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072477.1 MGP_129S1SvImJ_G0029703.1 mouse_genomes_project 5 89260305 89278684 + MGP_129S1SvImJ_P0072477 Gm7714 protein_coding protein_coding MGP_129S1SvImJ_T0098942.1 MGP_129S1SvImJ_G0037020.1 mouse_genomes_project 5 898681 900570 + Gm43031 sense_intronic sense_intronic MGP_129S1SvImJ_T0014945.1 MGP_129S1SvImJ_G0013034.1 mouse_genomes_project 5 27768801 27769489 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101220.1 MGP_129S1SvImJ_G0039287.1 mouse_genomes_project 5 150168208 150168337 + Gm23995 snoRNA snoRNA MGP_129S1SvImJ_T0075043.1 MGP_129S1SvImJ_G0030203.1 mouse_genomes_project 5 140778064 140802757 - MGP_129S1SvImJ_P0075043 Orai2 protein_coding protein_coding MGP_129S1SvImJ_T0075044.1 MGP_129S1SvImJ_G0030203.1 mouse_genomes_project 5 140778069 140802672 - MGP_129S1SvImJ_P0075044 Orai2 protein_coding protein_coding MGP_129S1SvImJ_T0075045.1 MGP_129S1SvImJ_G0030203.1 mouse_genomes_project 5 140781929 140802678 - MGP_129S1SvImJ_P0075045 Orai2 protein_coding protein_coding MGP_129S1SvImJ_T0075046.1 MGP_129S1SvImJ_G0030203.1 mouse_genomes_project 5 140798295 140802677 - Orai2 protein_coding retained_intron MGP_129S1SvImJ_T0015071.1 MGP_129S1SvImJ_G0013160.1 mouse_genomes_project 5 87820588 87822181 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008430.1 MGP_129S1SvImJ_G0006839.1 mouse_genomes_project 5 142465406 142471889 - Gm15498 lincRNA lincRNA MGP_129S1SvImJ_T0008456.1 MGP_129S1SvImJ_G0006862.1 mouse_genomes_project 5 154466595 154473404 + Gm36186 lincRNA lincRNA MGP_129S1SvImJ_T0014931.1 MGP_129S1SvImJ_G0013020.1 mouse_genomes_project 5 23537126 23537487 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004658.1 MGP_129S1SvImJ_G0004038.1 mouse_genomes_project 5 18475574 18480992 + A630072M18Rik antisense antisense MGP_129S1SvImJ_T0098610.1 MGP_129S1SvImJ_G0036695.1 mouse_genomes_project 5 123376914 123377023 + n-R5s176 rRNA rRNA MGP_129S1SvImJ_T0071318.1 MGP_129S1SvImJ_G0029488.1 mouse_genomes_project 5 34797979 34807101 + MGP_129S1SvImJ_P0071318 Grpel1 protein_coding protein_coding MGP_129S1SvImJ_T0010710.1 MGP_129S1SvImJ_G0008826.1 mouse_genomes_project 5 82329271 82329352 + Gm22048 miRNA miRNA MGP_129S1SvImJ_T0008098.1 MGP_129S1SvImJ_G0006608.1 mouse_genomes_project 5 31466797 31486618 - Gm20465 lincRNA lincRNA MGP_129S1SvImJ_T0001751.1 MGP_129S1SvImJ_G0001666.1 mouse_genomes_project 5 102326340 102327416 - TEC TEC MGP_129S1SvImJ_T0073599.1 MGP_129S1SvImJ_G0029949.1 mouse_genomes_project 5 117656401 117686436 + MGP_129S1SvImJ_P0073599 4930519G04Rik protein_coding protein_coding MGP_129S1SvImJ_T0073601.1 MGP_129S1SvImJ_G0029949.1 mouse_genomes_project 5 117664769 117681747 + 4930519G04Rik protein_coding retained_intron MGP_129S1SvImJ_T0073602.1 MGP_129S1SvImJ_G0029949.1 mouse_genomes_project 5 117668552 117684792 + MGP_129S1SvImJ_P0073602 4930519G04Rik protein_coding protein_coding MGP_129S1SvImJ_T0073603.1 MGP_129S1SvImJ_G0029949.1 mouse_genomes_project 5 117670512 117684792 + MGP_129S1SvImJ_P0073603 4930519G04Rik protein_coding protein_coding MGP_129S1SvImJ_T0008170.1 MGP_129S1SvImJ_G0006662.1 mouse_genomes_project 5 72583249 72585392 + 4933408A14Rik lincRNA lincRNA MGP_129S1SvImJ_T0008129.1 MGP_129S1SvImJ_G0006627.1 mouse_genomes_project 5 42009940 42013113 + Gm43699 lincRNA lincRNA MGP_129S1SvImJ_T0098598.1 MGP_129S1SvImJ_G0036683.1 mouse_genomes_project 5 21339746 21339839 - Gm24009 rRNA rRNA MGP_129S1SvImJ_T0001767.1 MGP_129S1SvImJ_G0001682.1 mouse_genomes_project 5 109132738 109136308 - TEC TEC MGP_129S1SvImJ_T0072456.1 MGP_129S1SvImJ_G0029693.1 mouse_genomes_project 5 88784638 88806832 + MGP_129S1SvImJ_P0072456 Prr27 protein_coding protein_coding MGP_129S1SvImJ_T0072457.1 MGP_129S1SvImJ_G0029693.1 mouse_genomes_project 5 88784638 88806832 + MGP_129S1SvImJ_P0072457 Prr27 protein_coding protein_coding MGP_129S1SvImJ_T0073261.1 MGP_129S1SvImJ_G0029885.1 mouse_genomes_project 5 112733106 112785029 + MGP_129S1SvImJ_P0073261 Pole protein_coding protein_coding MGP_129S1SvImJ_T0073262.1 MGP_129S1SvImJ_G0029885.1 mouse_genomes_project 5 112733141 112738004 + MGP_129S1SvImJ_P0073262 Pole protein_coding protein_coding MGP_129S1SvImJ_T0073263.1 MGP_129S1SvImJ_G0029885.1 mouse_genomes_project 5 112733177 112754865 + Pole protein_coding retained_intron MGP_129S1SvImJ_T0073264.1 MGP_129S1SvImJ_G0029885.1 mouse_genomes_project 5 112763787 112765921 + Pole protein_coding retained_intron MGP_129S1SvImJ_T0073265.1 MGP_129S1SvImJ_G0029885.1 mouse_genomes_project 5 112774295 112785006 + Pole protein_coding retained_intron MGP_129S1SvImJ_T0073266.1 MGP_129S1SvImJ_G0029885.1 mouse_genomes_project 5 112777315 112785008 + MGP_129S1SvImJ_P0073266 Pole protein_coding protein_coding MGP_129S1SvImJ_T0073267.1 MGP_129S1SvImJ_G0029885.1 mouse_genomes_project 5 112781020 112784991 + Pole protein_coding retained_intron MGP_129S1SvImJ_T0014960.1 MGP_129S1SvImJ_G0013049.1 mouse_genomes_project 5 31877302 31877552 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001628.1 MGP_129S1SvImJ_G0001545.1 mouse_genomes_project 5 57094374 57096321 + TEC TEC MGP_129S1SvImJ_T0008464.1 MGP_129S1SvImJ_G0006869.1 mouse_genomes_project 5 154781166 154786334 - 5930430L01Rik lincRNA lincRNA MGP_129S1SvImJ_T0008465.1 MGP_129S1SvImJ_G0006869.1 mouse_genomes_project 5 154782192 154786326 - 5930430L01Rik lincRNA lincRNA MGP_129S1SvImJ_T0070468.1 MGP_129S1SvImJ_G0029345.1 mouse_genomes_project 5 22173123 22175520 - MGP_129S1SvImJ_P0070468 Tmub1 protein_coding protein_coding MGP_129S1SvImJ_T0070469.1 MGP_129S1SvImJ_G0029345.1 mouse_genomes_project 5 22173131 22175291 - MGP_129S1SvImJ_P0070469 Tmub1 protein_coding protein_coding MGP_129S1SvImJ_T0070470.1 MGP_129S1SvImJ_G0029345.1 mouse_genomes_project 5 22173131 22174983 - MGP_129S1SvImJ_P0070470 Tmub1 protein_coding protein_coding MGP_129S1SvImJ_T0070471.1 MGP_129S1SvImJ_G0029345.1 mouse_genomes_project 5 22173714 22175253 - MGP_129S1SvImJ_P0070471 Tmub1 protein_coding protein_coding MGP_129S1SvImJ_T0070472.1 MGP_129S1SvImJ_G0029345.1 mouse_genomes_project 5 22174218 22175457 - MGP_129S1SvImJ_P0070472 Tmub1 protein_coding protein_coding MGP_129S1SvImJ_T0001790.1 MGP_129S1SvImJ_G0001705.1 mouse_genomes_project 5 115974799 115976097 + TEC TEC MGP_129S1SvImJ_T0008264.1 MGP_129S1SvImJ_G0006734.1 mouse_genomes_project 5 108314321 108318786 - lincRNA lincRNA MGP_129S1SvImJ_T0074229.1 MGP_129S1SvImJ_G0030063.1 mouse_genomes_project 5 126749599 126801948 + Tmem120b protein_coding processed_transcript MGP_129S1SvImJ_T0074230.1 MGP_129S1SvImJ_G0030063.1 mouse_genomes_project 5 126757279 126803015 + MGP_129S1SvImJ_P0074230 Tmem120b protein_coding protein_coding MGP_129S1SvImJ_T0074231.1 MGP_129S1SvImJ_G0030063.1 mouse_genomes_project 5 126757329 126800384 + MGP_129S1SvImJ_P0074231 Tmem120b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074232.1 MGP_129S1SvImJ_G0030063.1 mouse_genomes_project 5 126757330 126802275 + MGP_129S1SvImJ_P0074232 Tmem120b protein_coding protein_coding MGP_129S1SvImJ_T0074233.1 MGP_129S1SvImJ_G0030063.1 mouse_genomes_project 5 126757345 126800402 + MGP_129S1SvImJ_P0074233 Tmem120b protein_coding protein_coding MGP_129S1SvImJ_T0074234.1 MGP_129S1SvImJ_G0030063.1 mouse_genomes_project 5 126757355 126788273 + Tmem120b protein_coding retained_intron MGP_129S1SvImJ_T0074235.1 MGP_129S1SvImJ_G0030063.1 mouse_genomes_project 5 126757374 126784050 + Tmem120b protein_coding retained_intron MGP_129S1SvImJ_T0074236.1 MGP_129S1SvImJ_G0030063.1 mouse_genomes_project 5 126783582 126801086 + Tmem120b protein_coding retained_intron MGP_129S1SvImJ_T0074857.1 MGP_129S1SvImJ_G0030167.1 mouse_genomes_project 5 139414125 139417066 - MGP_129S1SvImJ_P0074857 Cldn4 protein_coding protein_coding MGP_129S1SvImJ_T0102561.1 MGP_129S1SvImJ_G0040394.1 mouse_genomes_project 5 84556427 84557016 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0004770.1 MGP_129S1SvImJ_G0004125.1 mouse_genomes_project 5 103420622 103429391 + Gm20548 antisense antisense MGP_129S1SvImJ_T0004771.1 MGP_129S1SvImJ_G0004125.1 mouse_genomes_project 5 103420648 103427487 + Gm20548 antisense antisense MGP_129S1SvImJ_T0004772.1 MGP_129S1SvImJ_G0004125.1 mouse_genomes_project 5 103420658 103427450 + Gm20548 antisense antisense MGP_129S1SvImJ_T0004773.1 MGP_129S1SvImJ_G0004125.1 mouse_genomes_project 5 103420664 103429602 + Gm20548 antisense antisense MGP_129S1SvImJ_T0004774.1 MGP_129S1SvImJ_G0004125.1 mouse_genomes_project 5 103423364 103427542 + Gm20548 antisense antisense MGP_129S1SvImJ_T0073596.1 MGP_129S1SvImJ_G0029946.1 mouse_genomes_project 5 117585024 117590807 - MGP_129S1SvImJ_P0073596 1500011B03Rik protein_coding protein_coding MGP_129S1SvImJ_T0073341.1 MGP_129S1SvImJ_G0029897.1 mouse_genomes_project 5 113827356 113884652 + MGP_129S1SvImJ_P0073341 Pitpnb protein_coding protein_coding MGP_129S1SvImJ_T0073342.1 MGP_129S1SvImJ_G0029897.1 mouse_genomes_project 5 113827400 113884652 + MGP_129S1SvImJ_P0073342 Pitpnb protein_coding protein_coding MGP_129S1SvImJ_T0073343.1 MGP_129S1SvImJ_G0029897.1 mouse_genomes_project 5 113827407 113881860 + MGP_129S1SvImJ_P0073343 Pitpnb protein_coding unknown_likely_coding MGP_129S1SvImJ_T0073344.1 MGP_129S1SvImJ_G0029897.1 mouse_genomes_project 5 113843072 113879406 + Pitpnb protein_coding processed_transcript MGP_129S1SvImJ_T0073345.1 MGP_129S1SvImJ_G0029897.1 mouse_genomes_project 5 113876408 113879996 + Pitpnb protein_coding retained_intron MGP_129S1SvImJ_T0004879.1 MGP_129S1SvImJ_G0004200.1 mouse_genomes_project 5 140436985 140438875 - Srrm3os antisense antisense MGP_129S1SvImJ_T0074462.1 MGP_129S1SvImJ_G0030100.1 mouse_genomes_project 5 128383035 128400181 + MGP_129S1SvImJ_P0074462 Ddx55 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074463.1 MGP_129S1SvImJ_G0030100.1 mouse_genomes_project 5 128383044 128401893 + MGP_129S1SvImJ_P0074463 Ddx55 protein_coding protein_coding MGP_129S1SvImJ_T0074464.1 MGP_129S1SvImJ_G0030100.1 mouse_genomes_project 5 128383062 128393117 + Ddx55 protein_coding processed_transcript MGP_129S1SvImJ_T0074465.1 MGP_129S1SvImJ_G0030100.1 mouse_genomes_project 5 128383124 128393173 + Ddx55 protein_coding processed_transcript MGP_129S1SvImJ_T0074466.1 MGP_129S1SvImJ_G0030100.1 mouse_genomes_project 5 128385827 128387256 + Ddx55 protein_coding retained_intron MGP_129S1SvImJ_T0074467.1 MGP_129S1SvImJ_G0030100.1 mouse_genomes_project 5 128394287 128400101 + Ddx55 protein_coding processed_transcript MGP_129S1SvImJ_T0074975.1 MGP_129S1SvImJ_G0030191.1 mouse_genomes_project 5 140391371 140435882 + Srrm3 protein_coding retained_intron MGP_129S1SvImJ_T0074976.1 MGP_129S1SvImJ_G0030191.1 mouse_genomes_project 5 140391378 140447199 + MGP_129S1SvImJ_P0074976 Srrm3 protein_coding protein_coding MGP_129S1SvImJ_T0074977.1 MGP_129S1SvImJ_G0030191.1 mouse_genomes_project 5 140405443 140467999 + MGP_129S1SvImJ_P0074977 Srrm3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074978.1 MGP_129S1SvImJ_G0030191.1 mouse_genomes_project 5 140405443 140469662 + MGP_129S1SvImJ_P0074978 Srrm3 protein_coding protein_coding MGP_129S1SvImJ_T0074979.1 MGP_129S1SvImJ_G0030191.1 mouse_genomes_project 5 140449393 140452489 + Srrm3 protein_coding retained_intron MGP_129S1SvImJ_T0074980.1 MGP_129S1SvImJ_G0030191.1 mouse_genomes_project 5 140461514 140463107 + Srrm3 protein_coding retained_intron MGP_129S1SvImJ_T0001535.1 MGP_129S1SvImJ_G0001453.1 mouse_genomes_project 5 35505441 35508318 + TEC TEC MGP_129S1SvImJ_T0001786.1 MGP_129S1SvImJ_G0001701.1 mouse_genomes_project 5 115755183 115758672 - TEC TEC MGP_129S1SvImJ_T0015151.1 MGP_129S1SvImJ_G0013240.1 mouse_genomes_project 5 116445144 116445348 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008290.1 MGP_129S1SvImJ_G0006751.1 mouse_genomes_project 5 114096448 114102973 + C130026L21Rik lincRNA lincRNA MGP_129S1SvImJ_T0008291.1 MGP_129S1SvImJ_G0006751.1 mouse_genomes_project 5 114096587 114102181 + C130026L21Rik lincRNA lincRNA MGP_129S1SvImJ_T0008292.1 MGP_129S1SvImJ_G0006751.1 mouse_genomes_project 5 114096594 114097903 + C130026L21Rik lincRNA lincRNA MGP_129S1SvImJ_T0008293.1 MGP_129S1SvImJ_G0006751.1 mouse_genomes_project 5 114097457 114122952 + C130026L21Rik lincRNA lincRNA MGP_129S1SvImJ_T0098604.1 MGP_129S1SvImJ_G0036689.1 mouse_genomes_project 5 76184327 76184450 - Gm24738 rRNA rRNA MGP_129S1SvImJ_T0001649.1 MGP_129S1SvImJ_G0001565.1 mouse_genomes_project 5 64935426 64936613 - TEC TEC MGP_129S1SvImJ_T0001919.1 MGP_129S1SvImJ_G0001832.1 mouse_genomes_project 5 148727162 148729379 - TEC pseudogene MGP_129S1SvImJ_T0001780.1 MGP_129S1SvImJ_G0001695.1 mouse_genomes_project 5 113826331 113827138 - TEC TEC MGP_129S1SvImJ_T0074565.1 MGP_129S1SvImJ_G0030118.1 mouse_genomes_project 5 131752636 132444073 - MGP_129S1SvImJ_P0074565 Tmem132d protein_coding protein_coding MGP_129S1SvImJ_T0074566.1 MGP_129S1SvImJ_G0030118.1 mouse_genomes_project 5 132269501 132276576 - Tmem132d protein_coding processed_transcript MGP_129S1SvImJ_T0074567.1 MGP_129S1SvImJ_G0030118.1 mouse_genomes_project 5 132269606 132276514 - Tmem132d protein_coding processed_transcript MGP_129S1SvImJ_T0015046.1 MGP_129S1SvImJ_G0013135.1 mouse_genomes_project 5 73403531 73404537 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070745.1 MGP_129S1SvImJ_G0029403.1 mouse_genomes_project 5 28914258 28919448 - MGP_129S1SvImJ_P0070745 Preb protein_coding protein_coding MGP_129S1SvImJ_T0070746.1 MGP_129S1SvImJ_G0029403.1 mouse_genomes_project 5 28914627 28918794 - Preb protein_coding processed_transcript MGP_129S1SvImJ_T0070747.1 MGP_129S1SvImJ_G0029403.1 mouse_genomes_project 5 28914753 28915444 - Preb protein_coding retained_intron MGP_129S1SvImJ_T0070748.1 MGP_129S1SvImJ_G0029403.1 mouse_genomes_project 5 28914903 28920812 - MGP_129S1SvImJ_P0070748 Preb protein_coding protein_coding MGP_129S1SvImJ_T0070749.1 MGP_129S1SvImJ_G0029403.1 mouse_genomes_project 5 28915192 28919371 - Preb protein_coding retained_intron MGP_129S1SvImJ_T0070750.1 MGP_129S1SvImJ_G0029403.1 mouse_genomes_project 5 28918682 28919369 - Preb protein_coding retained_intron MGP_129S1SvImJ_T0070751.1 MGP_129S1SvImJ_G0029403.1 mouse_genomes_project 5 28918830 28919933 - Preb protein_coding retained_intron MGP_129S1SvImJ_T0070752.1 MGP_129S1SvImJ_G0029403.1 mouse_genomes_project 5 28919417 28920977 - Preb protein_coding processed_transcript MGP_129S1SvImJ_T0070753.1 MGP_129S1SvImJ_G0029403.1 mouse_genomes_project 5 28919587 28920262 - Preb protein_coding processed_transcript MGP_129S1SvImJ_T0070754.1 MGP_129S1SvImJ_G0029403.1 mouse_genomes_project 5 28919645 28920959 - Preb protein_coding retained_intron MGP_129S1SvImJ_T0070755.1 MGP_129S1SvImJ_G0029403.1 mouse_genomes_project 5 28920067 28920969 - Preb protein_coding processed_transcript MGP_129S1SvImJ_T0001905.1 MGP_129S1SvImJ_G0001818.1 mouse_genomes_project 5 140175503 140182781 - TEC TEC MGP_129S1SvImJ_T0015041.1 MGP_129S1SvImJ_G0013130.1 mouse_genomes_project 5 71936801 71937572 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004759.1 MGP_129S1SvImJ_G0004118.1 mouse_genomes_project 5 101034424 101035651 + 4930405H06Rik antisense antisense MGP_129S1SvImJ_T0072910.1 MGP_129S1SvImJ_G0029801.1 mouse_genomes_project 5 105246304 105270908 - MGP_129S1SvImJ_P0072910 Slc10a6 protein_coding protein_coding MGP_129S1SvImJ_T0098968.1 MGP_129S1SvImJ_G0037045.1 mouse_genomes_project 5 135348138 135352827 - Gm43166 sense_intronic sense_intronic MGP_129S1SvImJ_T0075298.1 MGP_129S1SvImJ_G0030252.1 mouse_genomes_project 5 142853013 142855311 + MGP_129S1SvImJ_P0075298 protein_coding protein_coding MGP_129S1SvImJ_T0075838.1 MGP_129S1SvImJ_G0030362.1 mouse_genomes_project 5 150622565 150629303 - MGP_129S1SvImJ_P0075838 Zkscan14 protein_coding protein_coding MGP_129S1SvImJ_T0075839.1 MGP_129S1SvImJ_G0030362.1 mouse_genomes_project 5 150623242 150629292 - MGP_129S1SvImJ_P0075839 Zkscan14 protein_coding protein_coding MGP_129S1SvImJ_T0075840.1 MGP_129S1SvImJ_G0030362.1 mouse_genomes_project 5 150627064 150629303 - MGP_129S1SvImJ_P0075840 Zkscan14 protein_coding protein_coding MGP_129S1SvImJ_T0001467.1 MGP_129S1SvImJ_G0001388.1 mouse_genomes_project 5 9224231 9237687 - TEC TEC MGP_129S1SvImJ_T0001656.1 MGP_129S1SvImJ_G0001572.1 mouse_genomes_project 5 65187724 65189470 + TEC TEC MGP_129S1SvImJ_T0072565.1 MGP_129S1SvImJ_G0029728.1 mouse_genomes_project 5 91863336 91864285 + MGP_129S1SvImJ_P0072565 Pf4 protein_coding protein_coding MGP_129S1SvImJ_T0072566.1 MGP_129S1SvImJ_G0029728.1 mouse_genomes_project 5 91863414 91864058 + MGP_129S1SvImJ_P0072566 Pf4 protein_coding protein_coding MGP_129S1SvImJ_T0072567.1 MGP_129S1SvImJ_G0029728.1 mouse_genomes_project 5 91863792 91864280 + Pf4 protein_coding retained_intron MGP_129S1SvImJ_T0008481.1 MGP_129S1SvImJ_G0006878.1 mouse_genomes_project 5 155491076 155500514 + Gm43153 lincRNA lincRNA MGP_129S1SvImJ_T0004681.1 MGP_129S1SvImJ_G0004057.1 mouse_genomes_project 5 32382478 32383479 + Gm42846 antisense antisense MGP_129S1SvImJ_T0015144.1 MGP_129S1SvImJ_G0013233.1 mouse_genomes_project 5 112107636 112107999 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099917.1 MGP_129S1SvImJ_G0037984.1 mouse_genomes_project 5 38934467 38934647 - Gm23022 snRNA snRNA MGP_129S1SvImJ_T0101207.1 MGP_129S1SvImJ_G0039274.1 mouse_genomes_project 5 101066756 101066888 + Gm25969 snoRNA snoRNA MGP_129S1SvImJ_T0008176.1 MGP_129S1SvImJ_G0006666.1 mouse_genomes_project 5 73979985 73981981 + C78283 lincRNA lincRNA MGP_129S1SvImJ_T0014867.1 MGP_129S1SvImJ_G0012956.1 mouse_genomes_project 5 3570471 3570760 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073346.1 MGP_129S1SvImJ_G0029898.1 mouse_genomes_project 5 113914846 113915558 + Mn1 protein_coding processed_transcript MGP_129S1SvImJ_T0073347.1 MGP_129S1SvImJ_G0029898.1 mouse_genomes_project 5 113914926 113957754 + MGP_129S1SvImJ_P0073347 Mn1 protein_coding protein_coding MGP_129S1SvImJ_T0014919.1 MGP_129S1SvImJ_G0013008.1 mouse_genomes_project 5 21022650 21022774 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015169.1 MGP_129S1SvImJ_G0013258.1 mouse_genomes_project 5 125876121 125876661 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0071363.1 MGP_129S1SvImJ_G0029498.1 mouse_genomes_project 5 35366098 35431850 + MGP_129S1SvImJ_P0071363 Jakmip1 protein_coding protein_coding MGP_129S1SvImJ_T0071364.1 MGP_129S1SvImJ_G0029498.1 mouse_genomes_project 5 35366906 35425714 + Jakmip1 protein_coding processed_transcript MGP_129S1SvImJ_T0071365.1 MGP_129S1SvImJ_G0029498.1 mouse_genomes_project 5 35367661 35431946 + MGP_129S1SvImJ_P0071365 Jakmip1 protein_coding protein_coding MGP_129S1SvImJ_T0071366.1 MGP_129S1SvImJ_G0029498.1 mouse_genomes_project 5 35367681 35431645 + MGP_129S1SvImJ_P0071366 Jakmip1 protein_coding protein_coding MGP_129S1SvImJ_T0071367.1 MGP_129S1SvImJ_G0029498.1 mouse_genomes_project 5 35384797 35425734 + Jakmip1 protein_coding processed_transcript MGP_129S1SvImJ_T0071368.1 MGP_129S1SvImJ_G0029498.1 mouse_genomes_project 5 35385211 35427359 + Jakmip1 protein_coding retained_intron MGP_129S1SvImJ_T0071369.1 MGP_129S1SvImJ_G0029498.1 mouse_genomes_project 5 35385252 35445199 + MGP_129S1SvImJ_P0071369 Jakmip1 protein_coding protein_coding MGP_129S1SvImJ_T0071370.1 MGP_129S1SvImJ_G0029498.1 mouse_genomes_project 5 35388670 35465657 + MGP_129S1SvImJ_P0071370 Jakmip1 protein_coding protein_coding MGP_129S1SvImJ_T0071371.1 MGP_129S1SvImJ_G0029498.1 mouse_genomes_project 5 35388729 35427638 + Jakmip1 protein_coding retained_intron MGP_129S1SvImJ_T0071372.1 MGP_129S1SvImJ_G0029498.1 mouse_genomes_project 5 35425773 35488891 + MGP_129S1SvImJ_P0071372 Jakmip1 protein_coding protein_coding MGP_129S1SvImJ_T0071373.1 MGP_129S1SvImJ_G0029498.1 mouse_genomes_project 5 35425773 35488891 + MGP_129S1SvImJ_P0071373 Jakmip1 protein_coding protein_coding MGP_129S1SvImJ_T0071374.1 MGP_129S1SvImJ_G0029498.1 mouse_genomes_project 5 35431482 35432432 + Jakmip1 protein_coding retained_intron MGP_129S1SvImJ_T0071375.1 MGP_129S1SvImJ_G0029498.1 mouse_genomes_project 5 35463327 35465376 + Jakmip1 protein_coding retained_intron MGP_129S1SvImJ_T0071376.1 MGP_129S1SvImJ_G0029498.1 mouse_genomes_project 5 35466583 35492181 + MGP_129S1SvImJ_P0071376 Jakmip1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0001581.1 MGP_129S1SvImJ_G0001499.1 mouse_genomes_project 5 47613936 47615222 - TEC TEC MGP_129S1SvImJ_T0001878.1 MGP_129S1SvImJ_G0001792.1 mouse_genomes_project 5 136166627 136167375 - TEC TEC MGP_129S1SvImJ_T0075766.1 MGP_129S1SvImJ_G0030351.1 mouse_genomes_project 5 150124161 150155895 - MGP_129S1SvImJ_P0075766 Tmem130 protein_coding protein_coding MGP_129S1SvImJ_T0075767.1 MGP_129S1SvImJ_G0030351.1 mouse_genomes_project 5 150145051 150156064 - Tmem130 protein_coding processed_transcript MGP_129S1SvImJ_T0072405.1 MGP_129S1SvImJ_G0029681.1 mouse_genomes_project 5 88230552 88245423 - MGP_129S1SvImJ_P0072405 Ugt2a3 protein_coding protein_coding MGP_129S1SvImJ_T0074713.1 MGP_129S1SvImJ_G0030148.1 mouse_genomes_project 5 135052833 135055460 - MGP_129S1SvImJ_P0074713 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0008090.1 MGP_129S1SvImJ_G0006603.1 mouse_genomes_project 5 27973258 27985186 - Gm42806 lincRNA lincRNA MGP_129S1SvImJ_T0008091.1 MGP_129S1SvImJ_G0006603.1 mouse_genomes_project 5 27980959 27984157 - Gm42806 lincRNA lincRNA MGP_129S1SvImJ_T0004715.1 MGP_129S1SvImJ_G0004083.1 mouse_genomes_project 5 52577669 52581147 - Gm10441 antisense antisense MGP_129S1SvImJ_T0071807.1 MGP_129S1SvImJ_G0029575.1 mouse_genomes_project 5 64979313 65018595 + MGP_129S1SvImJ_P0071807 Klb protein_coding protein_coding MGP_129S1SvImJ_T0071808.1 MGP_129S1SvImJ_G0029575.1 mouse_genomes_project 5 64979406 64981245 + Klb protein_coding retained_intron MGP_129S1SvImJ_T0071809.1 MGP_129S1SvImJ_G0029575.1 mouse_genomes_project 5 64979407 65014114 + MGP_129S1SvImJ_P0071809 Klb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075920.1 MGP_129S1SvImJ_G0030387.1 mouse_genomes_project 5 152943943 152950409 - MGP_129S1SvImJ_P0075920 Cdx2 protein_coding protein_coding MGP_129S1SvImJ_T0072134.1 MGP_129S1SvImJ_G0029628.1 mouse_genomes_project 5 73646929 73661930 - MGP_129S1SvImJ_P0072134 Sgcb protein_coding protein_coding MGP_129S1SvImJ_T0072135.1 MGP_129S1SvImJ_G0029628.1 mouse_genomes_project 5 73658144 73658607 - Sgcb protein_coding retained_intron MGP_129S1SvImJ_T0074374.1 MGP_129S1SvImJ_G0030087.1 mouse_genomes_project 5 127841796 127883007 - MGP_129S1SvImJ_P0074374 Abcb9 protein_coding protein_coding MGP_129S1SvImJ_T0074375.1 MGP_129S1SvImJ_G0030087.1 mouse_genomes_project 5 127842689 127861157 - Abcb9 protein_coding retained_intron MGP_129S1SvImJ_T0074376.1 MGP_129S1SvImJ_G0030087.1 mouse_genomes_project 5 127853730 127872281 - MGP_129S1SvImJ_P0074376 Abcb9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074377.1 MGP_129S1SvImJ_G0030087.1 mouse_genomes_project 5 127853734 127872281 - MGP_129S1SvImJ_P0074377 Abcb9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074378.1 MGP_129S1SvImJ_G0030087.1 mouse_genomes_project 5 127858143 127861846 - Abcb9 protein_coding processed_transcript MGP_129S1SvImJ_T0074379.1 MGP_129S1SvImJ_G0030087.1 mouse_genomes_project 5 127869953 127882995 - Abcb9 protein_coding retained_intron MGP_129S1SvImJ_T0015054.1 MGP_129S1SvImJ_G0013143.1 mouse_genomes_project 5 76238042 76238394 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015134.1 MGP_129S1SvImJ_G0013223.1 mouse_genomes_project 5 110226801 110227386 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008214.1 MGP_129S1SvImJ_G0006698.1 mouse_genomes_project 5 93196297 93210168 + Gm26582 lincRNA lincRNA MGP_129S1SvImJ_T0014891.1 MGP_129S1SvImJ_G0012980.1 mouse_genomes_project 5 14875790 14876853 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008388.1 MGP_129S1SvImJ_G0006811.1 mouse_genomes_project 5 130410779 130411891 - Gm42592 lincRNA lincRNA MGP_129S1SvImJ_T0073209.1 MGP_129S1SvImJ_G0029875.1 mouse_genomes_project 5 112037463 112037734 - MGP_129S1SvImJ_P0073209 protein_coding protein_coding MGP_129S1SvImJ_T0101921.1 MGP_129S1SvImJ_G0039827.1 mouse_genomes_project 5 72501360 72518153 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0014925.1 MGP_129S1SvImJ_G0013014.1 mouse_genomes_project 5 21957112 21958633 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070610.1 MGP_129S1SvImJ_G0029378.1 mouse_genomes_project 5 27684138 27684438 - MGP_129S1SvImJ_P0070610 Gm5129 protein_coding protein_coding MGP_129S1SvImJ_T0070407.1 MGP_129S1SvImJ_G0029336.1 mouse_genomes_project 5 21885567 21906314 + MGP_129S1SvImJ_P0070407 Nupl2 protein_coding protein_coding MGP_129S1SvImJ_T0070408.1 MGP_129S1SvImJ_G0029336.1 mouse_genomes_project 5 21885604 21905135 + MGP_129S1SvImJ_P0070408 Nupl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070409.1 MGP_129S1SvImJ_G0029336.1 mouse_genomes_project 5 21888111 21890481 + Nupl2 protein_coding retained_intron MGP_129S1SvImJ_T0070410.1 MGP_129S1SvImJ_G0029336.1 mouse_genomes_project 5 21900508 21903730 + Nupl2 protein_coding retained_intron MGP_129S1SvImJ_T0008222.1 MGP_129S1SvImJ_G0006706.1 mouse_genomes_project 5 98474688 98486963 + Gm2861 lincRNA lincRNA MGP_129S1SvImJ_T0074269.1 MGP_129S1SvImJ_G0030069.1 mouse_genomes_project 5 127074985 127109085 + Bcl7a protein_coding processed_transcript MGP_129S1SvImJ_T0074270.1 MGP_129S1SvImJ_G0030069.1 mouse_genomes_project 5 127075599 127109986 + MGP_129S1SvImJ_P0074270 Bcl7a protein_coding protein_coding MGP_129S1SvImJ_T0074271.1 MGP_129S1SvImJ_G0030069.1 mouse_genomes_project 5 127075651 127095281 + MGP_129S1SvImJ_P0074271 Bcl7a protein_coding protein_coding MGP_129S1SvImJ_T0073432.1 MGP_129S1SvImJ_G0029918.1 mouse_genomes_project 5 116161287 116164096 + Wscd2 protein_coding retained_intron MGP_129S1SvImJ_T0073433.1 MGP_129S1SvImJ_G0029918.1 mouse_genomes_project 5 116161401 116254709 + MGP_129S1SvImJ_P0073433 Wscd2 protein_coding protein_coding MGP_129S1SvImJ_T0073434.1 MGP_129S1SvImJ_G0029918.1 mouse_genomes_project 5 116161706 116216587 + Wscd2 protein_coding retained_intron MGP_129S1SvImJ_T0073435.1 MGP_129S1SvImJ_G0029918.1 mouse_genomes_project 5 116211987 116218512 + Wscd2 protein_coding retained_intron MGP_129S1SvImJ_T0073436.1 MGP_129S1SvImJ_G0029918.1 mouse_genomes_project 5 116232958 116254702 + Wscd2 protein_coding processed_transcript MGP_129S1SvImJ_T0073437.1 MGP_129S1SvImJ_G0029918.1 mouse_genomes_project 5 116240846 116243932 + Wscd2 protein_coding processed_transcript MGP_129S1SvImJ_T0073074.1 MGP_129S1SvImJ_G0029844.1 mouse_genomes_project 5 109764525 109773665 - MGP_129S1SvImJ_P0073074 Gfi1 protein_coding protein_coding MGP_129S1SvImJ_T0073075.1 MGP_129S1SvImJ_G0029844.1 mouse_genomes_project 5 109764525 109772199 - MGP_129S1SvImJ_P0073075 Gfi1 protein_coding protein_coding MGP_129S1SvImJ_T0073076.1 MGP_129S1SvImJ_G0029844.1 mouse_genomes_project 5 109764534 109773665 - MGP_129S1SvImJ_P0073076 Gfi1 protein_coding protein_coding MGP_129S1SvImJ_T0073077.1 MGP_129S1SvImJ_G0029844.1 mouse_genomes_project 5 109765092 109771817 - MGP_129S1SvImJ_P0073077 Gfi1 protein_coding protein_coding MGP_129S1SvImJ_T0073078.1 MGP_129S1SvImJ_G0029844.1 mouse_genomes_project 5 109769476 109773896 - MGP_129S1SvImJ_P0073078 Gfi1 protein_coding protein_coding MGP_129S1SvImJ_T0072568.1 MGP_129S1SvImJ_G0029729.1 mouse_genomes_project 5 91876987 91881626 + Cxcl3 protein_coding retained_intron MGP_129S1SvImJ_T0072569.1 MGP_129S1SvImJ_G0029729.1 mouse_genomes_project 5 91876987 91880117 + MGP_129S1SvImJ_P0072569 Cxcl3 protein_coding protein_coding MGP_129S1SvImJ_T0008112.1 MGP_129S1SvImJ_G0006616.1 mouse_genomes_project 5 36288534 36292680 + Gm20052 lincRNA lincRNA MGP_129S1SvImJ_T0008113.1 MGP_129S1SvImJ_G0006616.1 mouse_genomes_project 5 36288701 36289736 + Gm20052 lincRNA lincRNA MGP_129S1SvImJ_T0008114.1 MGP_129S1SvImJ_G0006616.1 mouse_genomes_project 5 36289112 36291562 + Gm20052 lincRNA lincRNA MGP_129S1SvImJ_T0008115.1 MGP_129S1SvImJ_G0006616.1 mouse_genomes_project 5 36289458 36292039 + Gm20052 lincRNA lincRNA MGP_129S1SvImJ_T0008116.1 MGP_129S1SvImJ_G0006616.1 mouse_genomes_project 5 36289469 36291900 + Gm20052 lincRNA lincRNA MGP_129S1SvImJ_T0070201.1 MGP_129S1SvImJ_G0029294.1 mouse_genomes_project 5 9523574 9741834 + MGP_129S1SvImJ_P0070201 Sema3d protein_coding protein_coding MGP_129S1SvImJ_T0070202.1 MGP_129S1SvImJ_G0029294.1 mouse_genomes_project 5 9523695 9709970 + Sema3d protein_coding processed_transcript MGP_129S1SvImJ_T0070203.1 MGP_129S1SvImJ_G0029294.1 mouse_genomes_project 5 9523695 9732157 + MGP_129S1SvImJ_P0070203 Sema3d protein_coding protein_coding MGP_129S1SvImJ_T0070204.1 MGP_129S1SvImJ_G0029294.1 mouse_genomes_project 5 9634625 9657779 + Sema3d protein_coding processed_transcript MGP_129S1SvImJ_T0070205.1 MGP_129S1SvImJ_G0029294.1 mouse_genomes_project 5 9727391 9741638 + Sema3d protein_coding processed_transcript MGP_129S1SvImJ_T0072821.1 MGP_129S1SvImJ_G0029786.1 mouse_genomes_project 5 101925358 101985756 - MGP_129S1SvImJ_P0072821 Lin54 protein_coding protein_coding MGP_129S1SvImJ_T0072822.1 MGP_129S1SvImJ_G0029786.1 mouse_genomes_project 5 101925368 101983088 - MGP_129S1SvImJ_P0072822 Lin54 protein_coding protein_coding MGP_129S1SvImJ_T0072823.1 MGP_129S1SvImJ_G0029786.1 mouse_genomes_project 5 101925473 101985792 - MGP_129S1SvImJ_P0072823 Lin54 protein_coding protein_coding MGP_129S1SvImJ_T0072824.1 MGP_129S1SvImJ_G0029786.1 mouse_genomes_project 5 101925473 101983130 - MGP_129S1SvImJ_P0072824 Lin54 protein_coding protein_coding MGP_129S1SvImJ_T0072825.1 MGP_129S1SvImJ_G0029786.1 mouse_genomes_project 5 101925482 101983075 - MGP_129S1SvImJ_P0072825 Lin54 protein_coding protein_coding MGP_129S1SvImJ_T0072826.1 MGP_129S1SvImJ_G0029786.1 mouse_genomes_project 5 101925640 101985805 - MGP_129S1SvImJ_P0072826 Lin54 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072827.1 MGP_129S1SvImJ_G0029786.1 mouse_genomes_project 5 101926992 101983020 - MGP_129S1SvImJ_P0072827 Lin54 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072828.1 MGP_129S1SvImJ_G0029786.1 mouse_genomes_project 5 101926992 101983020 - MGP_129S1SvImJ_P0072828 Lin54 protein_coding protein_coding MGP_129S1SvImJ_T0072829.1 MGP_129S1SvImJ_G0029786.1 mouse_genomes_project 5 101942951 101969403 - MGP_129S1SvImJ_P0072829 Lin54 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072830.1 MGP_129S1SvImJ_G0029786.1 mouse_genomes_project 5 101968320 101983075 - Lin54 protein_coding retained_intron MGP_129S1SvImJ_T0015189.1 MGP_129S1SvImJ_G0013278.1 mouse_genomes_project 5 141591406 141591802 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072573.1 MGP_129S1SvImJ_G0029732.1 mouse_genomes_project 5 91996279 91998347 + MGP_129S1SvImJ_P0072573 Cxcl2 protein_coding protein_coding MGP_129S1SvImJ_T0072574.1 MGP_129S1SvImJ_G0029732.1 mouse_genomes_project 5 91996281 91998347 + Cxcl2 protein_coding retained_intron MGP_129S1SvImJ_T0072575.1 MGP_129S1SvImJ_G0029732.1 mouse_genomes_project 5 91996281 91996770 + Cxcl2 protein_coding retained_intron MGP_129S1SvImJ_T0072576.1 MGP_129S1SvImJ_G0029732.1 mouse_genomes_project 5 91996281 91998347 + MGP_129S1SvImJ_P0072576 Cxcl2 protein_coding protein_coding MGP_129S1SvImJ_T0101712.1 MGP_129S1SvImJ_G0039718.1 mouse_genomes_project 5 22399082 22402197 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101713.1 MGP_129S1SvImJ_G0039718.1 mouse_genomes_project 5 22401020 22402071 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0008461.1 MGP_129S1SvImJ_G0006867.1 mouse_genomes_project 5 154738571 154739988 + 8430423G03Rik lincRNA lincRNA MGP_129S1SvImJ_T0098370.1 MGP_129S1SvImJ_G0036455.1 mouse_genomes_project 5 125435475 125435891 - pseudogene pseudogene MGP_129S1SvImJ_T0070696.1 MGP_129S1SvImJ_G0029395.1 mouse_genomes_project 5 28665389 28750868 + MGP_129S1SvImJ_P0070696 Dpysl5 protein_coding protein_coding MGP_129S1SvImJ_T0070697.1 MGP_129S1SvImJ_G0029395.1 mouse_genomes_project 5 28665407 28753915 + MGP_129S1SvImJ_P0070697 Dpysl5 protein_coding protein_coding MGP_129S1SvImJ_T0070698.1 MGP_129S1SvImJ_G0029395.1 mouse_genomes_project 5 28665414 28704995 + MGP_129S1SvImJ_P0070698 Dpysl5 protein_coding protein_coding MGP_129S1SvImJ_T0070699.1 MGP_129S1SvImJ_G0029395.1 mouse_genomes_project 5 28731488 28740230 + Dpysl5 protein_coding processed_transcript MGP_129S1SvImJ_T0070700.1 MGP_129S1SvImJ_G0029395.1 mouse_genomes_project 5 28741433 28750854 + Dpysl5 protein_coding retained_intron MGP_129S1SvImJ_T0070701.1 MGP_129S1SvImJ_G0029395.1 mouse_genomes_project 5 28746568 28750960 + Dpysl5 protein_coding retained_intron MGP_129S1SvImJ_T0070702.1 MGP_129S1SvImJ_G0029395.1 mouse_genomes_project 5 28748269 28751107 + Dpysl5 protein_coding retained_intron MGP_129S1SvImJ_T0072765.1 MGP_129S1SvImJ_G0029775.1 mouse_genomes_project 5 99919526 99920576 + MGP_129S1SvImJ_P0072765 Gm11111 protein_coding protein_coding MGP_129S1SvImJ_T0101197.1 MGP_129S1SvImJ_G0039264.1 mouse_genomes_project 5 77974914 77975037 - Gm22011 snoRNA snoRNA MGP_129S1SvImJ_T0071694.1 MGP_129S1SvImJ_G0029553.1 mouse_genomes_project 5 52298785 52300294 + Smim20 protein_coding retained_intron MGP_129S1SvImJ_T0071695.1 MGP_129S1SvImJ_G0029553.1 mouse_genomes_project 5 52298840 52310238 + MGP_129S1SvImJ_P0071695 Smim20 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071696.1 MGP_129S1SvImJ_G0029553.1 mouse_genomes_project 5 52298840 52310238 + MGP_129S1SvImJ_P0071696 Smim20 protein_coding protein_coding MGP_129S1SvImJ_T0071697.1 MGP_129S1SvImJ_G0029553.1 mouse_genomes_project 5 52298879 52310238 + MGP_129S1SvImJ_P0071697 Smim20 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071698.1 MGP_129S1SvImJ_G0029553.1 mouse_genomes_project 5 52298892 52300968 + Smim20 protein_coding retained_intron MGP_129S1SvImJ_T0071699.1 MGP_129S1SvImJ_G0029553.1 mouse_genomes_project 5 52308815 52309724 + Smim20 protein_coding retained_intron MGP_129S1SvImJ_T0004917.1 MGP_129S1SvImJ_G0004227.1 mouse_genomes_project 5 156212779 156228093 - Gm42556 antisense antisense MGP_129S1SvImJ_T0001791.1 MGP_129S1SvImJ_G0001706.1 mouse_genomes_project 5 116548070 116551350 + TEC TEC MGP_129S1SvImJ_T0004683.1 MGP_129S1SvImJ_G0004059.1 mouse_genomes_project 5 32898407 32900167 + Gm15522 antisense antisense MGP_129S1SvImJ_T0004837.1 MGP_129S1SvImJ_G0004170.1 mouse_genomes_project 5 125407110 125407744 + 1700008B11Rik antisense antisense MGP_129S1SvImJ_T0075299.1 MGP_129S1SvImJ_G0030253.1 mouse_genomes_project 5 142876127 142899172 + MGP_129S1SvImJ_P0075299 Zkscan1 protein_coding protein_coding MGP_129S1SvImJ_T0075300.1 MGP_129S1SvImJ_G0030253.1 mouse_genomes_project 5 142876127 142899172 + MGP_129S1SvImJ_P0075300 Zkscan1 protein_coding protein_coding MGP_129S1SvImJ_T0075301.1 MGP_129S1SvImJ_G0030253.1 mouse_genomes_project 5 142876163 142895844 + MGP_129S1SvImJ_P0075301 Zkscan1 protein_coding protein_coding MGP_129S1SvImJ_T0075302.1 MGP_129S1SvImJ_G0030253.1 mouse_genomes_project 5 142883730 142895843 + MGP_129S1SvImJ_P0075302 Zkscan1 protein_coding protein_coding MGP_129S1SvImJ_T0070109.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5034443 5330927 - MGP_129S1SvImJ_P0070109 Adam22 protein_coding protein_coding MGP_129S1SvImJ_T0070110.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5034443 5330828 - MGP_129S1SvImJ_P0070110 Adam22 protein_coding protein_coding MGP_129S1SvImJ_T0070111.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5034443 5330828 - MGP_129S1SvImJ_P0070111 Adam22 protein_coding protein_coding MGP_129S1SvImJ_T0070112.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5034443 5330828 - MGP_129S1SvImJ_P0070112 Adam22 protein_coding protein_coding MGP_129S1SvImJ_T0070113.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5034443 5330927 - MGP_129S1SvImJ_P0070113 Adam22 protein_coding protein_coding MGP_129S1SvImJ_T0070114.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5039929 5085928 - MGP_129S1SvImJ_P0070114 Adam22 protein_coding protein_coding MGP_129S1SvImJ_T0070115.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5040775 5081436 - MGP_129S1SvImJ_P0070115 Adam22 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070116.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5040775 5081436 - MGP_129S1SvImJ_P0070116 Adam22 protein_coding protein_coding MGP_129S1SvImJ_T0070117.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5040775 5138802 - MGP_129S1SvImJ_P0070117 Adam22 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0070118.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5045177 5081436 - MGP_129S1SvImJ_P0070118 Adam22 protein_coding protein_coding MGP_129S1SvImJ_T0070119.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5045177 5081436 - MGP_129S1SvImJ_P0070119 Adam22 protein_coding protein_coding MGP_129S1SvImJ_T0070120.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5045177 5081436 - MGP_129S1SvImJ_P0070120 Adam22 protein_coding protein_coding MGP_129S1SvImJ_T0070121.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5045177 5081436 - MGP_129S1SvImJ_P0070121 Adam22 protein_coding protein_coding MGP_129S1SvImJ_T0070122.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5045177 5081436 - MGP_129S1SvImJ_P0070122 Adam22 protein_coding protein_coding MGP_129S1SvImJ_T0070123.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5045177 5081436 - MGP_129S1SvImJ_P0070123 Adam22 protein_coding protein_coding MGP_129S1SvImJ_T0070124.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5045177 5081436 - MGP_129S1SvImJ_P0070124 Adam22 protein_coding protein_coding MGP_129S1SvImJ_T0070125.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5045177 5081436 - MGP_129S1SvImJ_P0070125 Adam22 protein_coding protein_coding MGP_129S1SvImJ_T0070126.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5045177 5081436 - MGP_129S1SvImJ_P0070126 Adam22 protein_coding protein_coding MGP_129S1SvImJ_T0070127.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5045177 5081436 - MGP_129S1SvImJ_P0070127 Adam22 protein_coding protein_coding MGP_129S1SvImJ_T0070128.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5051107 5053410 - Adam22 protein_coding retained_intron MGP_129S1SvImJ_T0070129.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5055443 5330923 - MGP_129S1SvImJ_P0070129 Adam22 protein_coding protein_coding MGP_129S1SvImJ_T0070130.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5055506 5081436 - MGP_129S1SvImJ_P0070130 Adam22 protein_coding protein_coding MGP_129S1SvImJ_T0070131.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5055519 5138802 - MGP_129S1SvImJ_P0070131 Adam22 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0070132.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5112328 5330927 - MGP_129S1SvImJ_P0070132 Adam22 protein_coding protein_coding MGP_129S1SvImJ_T0070134.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5189320 5330980 - Adam22 protein_coding processed_transcript MGP_129S1SvImJ_T0070135.1 MGP_129S1SvImJ_G0029281.1 mouse_genomes_project 5 5329795 5331006 - Adam22 protein_coding retained_intron MGP_129S1SvImJ_T0073000.1 MGP_129S1SvImJ_G0029831.1 mouse_genomes_project 5 108584400 108644601 - MGP_129S1SvImJ_P0073000 Zfp644 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0073001.1 MGP_129S1SvImJ_G0029831.1 mouse_genomes_project 5 108584404 108665402 - MGP_129S1SvImJ_P0073001 Zfp644 protein_coding protein_coding MGP_129S1SvImJ_T0073002.1 MGP_129S1SvImJ_G0029831.1 mouse_genomes_project 5 108584409 108665169 - MGP_129S1SvImJ_P0073002 Zfp644 protein_coding protein_coding MGP_129S1SvImJ_T0073003.1 MGP_129S1SvImJ_G0029831.1 mouse_genomes_project 5 108584738 108592052 - Zfp644 protein_coding processed_transcript MGP_129S1SvImJ_T0073004.1 MGP_129S1SvImJ_G0029831.1 mouse_genomes_project 5 108585635 108665377 - Zfp644 protein_coding processed_transcript MGP_129S1SvImJ_T0073005.1 MGP_129S1SvImJ_G0029831.1 mouse_genomes_project 5 108604492 108665398 - MGP_129S1SvImJ_P0073005 Zfp644 protein_coding protein_coding MGP_129S1SvImJ_T0073006.1 MGP_129S1SvImJ_G0029831.1 mouse_genomes_project 5 108605503 108665136 - MGP_129S1SvImJ_P0073006 Zfp644 protein_coding protein_coding MGP_129S1SvImJ_T0073007.1 MGP_129S1SvImJ_G0029831.1 mouse_genomes_project 5 108605754 108635398 - MGP_129S1SvImJ_P0073007 Zfp644 protein_coding protein_coding MGP_129S1SvImJ_T0073008.1 MGP_129S1SvImJ_G0029831.1 mouse_genomes_project 5 108605922 108665222 - MGP_129S1SvImJ_P0073008 Zfp644 protein_coding protein_coding MGP_129S1SvImJ_T0073009.1 MGP_129S1SvImJ_G0029831.1 mouse_genomes_project 5 108605969 108665136 - MGP_129S1SvImJ_P0073009 Zfp644 protein_coding protein_coding MGP_129S1SvImJ_T0073010.1 MGP_129S1SvImJ_G0029831.1 mouse_genomes_project 5 108606112 108665222 - MGP_129S1SvImJ_P0073010 Zfp644 protein_coding protein_coding MGP_129S1SvImJ_T0073011.1 MGP_129S1SvImJ_G0029831.1 mouse_genomes_project 5 108657299 108663590 - Zfp644 protein_coding retained_intron MGP_129S1SvImJ_T0073012.1 MGP_129S1SvImJ_G0029831.1 mouse_genomes_project 5 108658345 108664738 - Zfp644 protein_coding retained_intron MGP_129S1SvImJ_T0073013.1 MGP_129S1SvImJ_G0029831.1 mouse_genomes_project 5 108659117 108665118 - Zfp644 protein_coding processed_transcript MGP_129S1SvImJ_T0073014.1 MGP_129S1SvImJ_G0029831.1 mouse_genomes_project 5 108659130 108665116 - Zfp644 protein_coding processed_transcript MGP_129S1SvImJ_T0073015.1 MGP_129S1SvImJ_G0029831.1 mouse_genomes_project 5 108663621 108665859 - Zfp644 protein_coding processed_transcript MGP_129S1SvImJ_T0073016.1 MGP_129S1SvImJ_G0029831.1 mouse_genomes_project 5 108663926 108664583 - Zfp644 protein_coding processed_transcript MGP_129S1SvImJ_T0008134.1 MGP_129S1SvImJ_G0006632.1 mouse_genomes_project 5 43640616 43654487 + 4930431F12Rik lincRNA lincRNA MGP_129S1SvImJ_T0071781.1 MGP_129S1SvImJ_G0029570.1 mouse_genomes_project 5 64577601 64656495 + MGP_129S1SvImJ_P0071781 Fam114a1 protein_coding protein_coding MGP_129S1SvImJ_T0071782.1 MGP_129S1SvImJ_G0029570.1 mouse_genomes_project 5 64582515 64616977 + MGP_129S1SvImJ_P0071782 Fam114a1 protein_coding protein_coding MGP_129S1SvImJ_T0015131.1 MGP_129S1SvImJ_G0013220.1 mouse_genomes_project 5 110063162 110063389 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001550.1 MGP_129S1SvImJ_G0001468.1 mouse_genomes_project 5 42583948 42584490 - TEC TEC MGP_129S1SvImJ_T0004891.1 MGP_129S1SvImJ_G0004208.1 mouse_genomes_project 5 143930952 143937312 + 6330403L08Rik antisense antisense MGP_129S1SvImJ_T0004892.1 MGP_129S1SvImJ_G0004208.1 mouse_genomes_project 5 143930952 143937313 + 6330403L08Rik antisense antisense MGP_129S1SvImJ_T0001539.1 MGP_129S1SvImJ_G0001457.1 mouse_genomes_project 5 38076409 38079827 - TEC TEC MGP_129S1SvImJ_T0001863.1 MGP_129S1SvImJ_G0001777.1 mouse_genomes_project 5 134071598 134073459 + TEC TEC MGP_129S1SvImJ_T0001894.1 MGP_129S1SvImJ_G0001808.1 mouse_genomes_project 5 137765543 137766465 + TEC TEC MGP_129S1SvImJ_T0074280.1 MGP_129S1SvImJ_G0030072.1 mouse_genomes_project 5 127228456 127247146 + MGP_129S1SvImJ_P0074280 Lrrc43 protein_coding protein_coding MGP_129S1SvImJ_T0074281.1 MGP_129S1SvImJ_G0030072.1 mouse_genomes_project 5 127228459 127247151 + MGP_129S1SvImJ_P0074281 Lrrc43 protein_coding protein_coding MGP_129S1SvImJ_T0014886.1 MGP_129S1SvImJ_G0012975.1 mouse_genomes_project 5 13183533 13183935 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099902.1 MGP_129S1SvImJ_G0037969.1 mouse_genomes_project 5 17751926 17752026 + Gm22755 snRNA snRNA MGP_129S1SvImJ_T0001862.1 MGP_129S1SvImJ_G0001776.1 mouse_genomes_project 5 134051314 134054699 + TEC TEC MGP_129S1SvImJ_T0001879.1 MGP_129S1SvImJ_G0001793.1 mouse_genomes_project 5 136193310 136195508 - TEC TEC MGP_129S1SvImJ_T0075660.1 MGP_129S1SvImJ_G0030328.1 mouse_genomes_project 5 148622652 148636506 - E130309D02Rik protein_coding processed_transcript MGP_129S1SvImJ_T0075661.1 MGP_129S1SvImJ_G0030328.1 mouse_genomes_project 5 148622664 148636802 - MGP_129S1SvImJ_P0075661 E130309D02Rik protein_coding protein_coding MGP_129S1SvImJ_T0075662.1 MGP_129S1SvImJ_G0030328.1 mouse_genomes_project 5 148622666 148636573 - E130309D02Rik protein_coding retained_intron MGP_129S1SvImJ_T0075663.1 MGP_129S1SvImJ_G0030328.1 mouse_genomes_project 5 148629752 148636782 - E130309D02Rik protein_coding processed_transcript MGP_129S1SvImJ_T0075100.1 MGP_129S1SvImJ_G0030212.1 mouse_genomes_project 5 141687293 141693130 - MGP_129S1SvImJ_P0075100 Znhit1 protein_coding protein_coding MGP_129S1SvImJ_T0075101.1 MGP_129S1SvImJ_G0030212.1 mouse_genomes_project 5 141687318 141691994 - MGP_129S1SvImJ_P0075101 Znhit1 protein_coding protein_coding MGP_129S1SvImJ_T0075102.1 MGP_129S1SvImJ_G0030212.1 mouse_genomes_project 5 141687319 141692003 - MGP_129S1SvImJ_P0075102 Znhit1 protein_coding protein_coding MGP_129S1SvImJ_T0075103.1 MGP_129S1SvImJ_G0030212.1 mouse_genomes_project 5 141688020 141692610 - MGP_129S1SvImJ_P0075103 Znhit1 protein_coding protein_coding MGP_129S1SvImJ_T0015155.1 MGP_129S1SvImJ_G0013244.1 mouse_genomes_project 5 117612435 117613011 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102567.1 MGP_129S1SvImJ_G0040400.1 mouse_genomes_project 5 88096519 88105732 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015076.1 MGP_129S1SvImJ_G0013165.1 mouse_genomes_project 5 88546719 88548633 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001668.1 MGP_129S1SvImJ_G0001584.1 mouse_genomes_project 5 65777378 65782131 - TEC TEC MGP_129S1SvImJ_T0004853.1 MGP_129S1SvImJ_G0004180.1 mouse_genomes_project 5 128026655 128034071 + Pitpnm2os1 antisense antisense MGP_129S1SvImJ_T0074493.1 MGP_129S1SvImJ_G0030105.1 mouse_genomes_project 5 128618375 128648286 - MGP_129S1SvImJ_P0074493 Ccdc92 protein_coding protein_coding MGP_129S1SvImJ_T0074494.1 MGP_129S1SvImJ_G0030105.1 mouse_genomes_project 5 128619850 128647753 - MGP_129S1SvImJ_P0074494 Ccdc92 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074495.1 MGP_129S1SvImJ_G0030105.1 mouse_genomes_project 5 128620026 128637450 - MGP_129S1SvImJ_P0074495 Ccdc92 protein_coding protein_coding MGP_129S1SvImJ_T0014996.1 MGP_129S1SvImJ_G0013085.1 mouse_genomes_project 5 53188280 53189358 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075841.1 MGP_129S1SvImJ_G0030363.1 mouse_genomes_project 5 150632546 150651055 + MGP_129S1SvImJ_P0075841 Zkscan5 protein_coding protein_coding MGP_129S1SvImJ_T0075842.1 MGP_129S1SvImJ_G0030363.1 mouse_genomes_project 5 150632652 150651055 + MGP_129S1SvImJ_P0075842 Zkscan5 protein_coding protein_coding MGP_129S1SvImJ_T0075843.1 MGP_129S1SvImJ_G0030363.1 mouse_genomes_project 5 150633105 150647889 + MGP_129S1SvImJ_P0075843 Zkscan5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075844.1 MGP_129S1SvImJ_G0030363.1 mouse_genomes_project 5 150635587 150647753 + MGP_129S1SvImJ_P0075844 Zkscan5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075845.1 MGP_129S1SvImJ_G0030363.1 mouse_genomes_project 5 150635617 150647807 + MGP_129S1SvImJ_P0075845 Zkscan5 protein_coding protein_coding MGP_129S1SvImJ_T0075846.1 MGP_129S1SvImJ_G0030363.1 mouse_genomes_project 5 150636508 150647623 + Zkscan5 protein_coding processed_transcript MGP_129S1SvImJ_T0099908.1 MGP_129S1SvImJ_G0037975.1 mouse_genomes_project 5 27411085 27411192 - Gm24538 snRNA snRNA MGP_129S1SvImJ_T0071559.1 MGP_129S1SvImJ_G0029531.1 mouse_genomes_project 5 44135698 44152897 - MGP_129S1SvImJ_P0071559 Qdpr protein_coding protein_coding MGP_129S1SvImJ_T0071560.1 MGP_129S1SvImJ_G0029531.1 mouse_genomes_project 5 44135798 44145250 - Qdpr protein_coding retained_intron MGP_129S1SvImJ_T0071561.1 MGP_129S1SvImJ_G0029531.1 mouse_genomes_project 5 44136153 44147354 - Qdpr protein_coding processed_transcript MGP_129S1SvImJ_T0071562.1 MGP_129S1SvImJ_G0029531.1 mouse_genomes_project 5 44140996 44152949 - MGP_129S1SvImJ_P0071562 Qdpr protein_coding protein_coding MGP_129S1SvImJ_T0071563.1 MGP_129S1SvImJ_G0029531.1 mouse_genomes_project 5 44145158 44152933 - MGP_129S1SvImJ_P0071563 Qdpr protein_coding protein_coding MGP_129S1SvImJ_T0004792.1 MGP_129S1SvImJ_G0004139.1 mouse_genomes_project 5 112901884 112905473 + antisense antisense MGP_129S1SvImJ_T0001507.1 MGP_129S1SvImJ_G0001427.1 mouse_genomes_project 5 28824275 28826340 - TEC TEC MGP_129S1SvImJ_T0004842.1 MGP_129S1SvImJ_G0004175.1 mouse_genomes_project 5 126686058 126693885 - Gm2479 antisense antisense MGP_129S1SvImJ_T0004843.1 MGP_129S1SvImJ_G0004175.1 mouse_genomes_project 5 126686223 126691683 - Gm2479 antisense antisense MGP_129S1SvImJ_T0074342.1 MGP_129S1SvImJ_G0030079.1 mouse_genomes_project 5 127510392 127514726 + Kntc1 protein_coding retained_intron MGP_129S1SvImJ_T0074343.1 MGP_129S1SvImJ_G0030079.1 mouse_genomes_project 5 127510402 127583058 + MGP_129S1SvImJ_P0074343 Kntc1 protein_coding protein_coding MGP_129S1SvImJ_T0074344.1 MGP_129S1SvImJ_G0030079.1 mouse_genomes_project 5 127533306 127540133 + Kntc1 protein_coding processed_transcript MGP_129S1SvImJ_T0074345.1 MGP_129S1SvImJ_G0030079.1 mouse_genomes_project 5 127541679 127542570 + MGP_129S1SvImJ_P0074345 Kntc1 protein_coding protein_coding MGP_129S1SvImJ_T0074346.1 MGP_129S1SvImJ_G0030079.1 mouse_genomes_project 5 127547701 127550616 + Kntc1 protein_coding retained_intron MGP_129S1SvImJ_T0074347.1 MGP_129S1SvImJ_G0030079.1 mouse_genomes_project 5 127572939 127583056 + MGP_129S1SvImJ_P0074347 Kntc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074348.1 MGP_129S1SvImJ_G0030079.1 mouse_genomes_project 5 127581013 127583057 + Kntc1 protein_coding retained_intron MGP_129S1SvImJ_T0015001.1 MGP_129S1SvImJ_G0013090.1 mouse_genomes_project 5 54912940 54913745 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004835.1 MGP_129S1SvImJ_G0004168.1 mouse_genomes_project 5 124860720 124862292 + Gm42918 antisense antisense MGP_129S1SvImJ_T0001627.1 MGP_129S1SvImJ_G0001544.1 mouse_genomes_project 5 57089030 57091625 + TEC TEC MGP_129S1SvImJ_T0101175.1 MGP_129S1SvImJ_G0039242.1 mouse_genomes_project 5 16311690 16311818 + Gm23822 snoRNA snoRNA MGP_129S1SvImJ_T0099942.1 MGP_129S1SvImJ_G0038009.1 mouse_genomes_project 5 92297124 92297231 - Gm23092 snRNA snRNA MGP_129S1SvImJ_T0015026.1 MGP_129S1SvImJ_G0013115.1 mouse_genomes_project 5 63766346 63767217 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001895.1 MGP_129S1SvImJ_G0001809.1 mouse_genomes_project 5 138444280 138445246 - TEC TEC MGP_129S1SvImJ_T0001612.1 MGP_129S1SvImJ_G0001529.1 mouse_genomes_project 5 50858989 50862799 - TEC TEC MGP_129S1SvImJ_T0073802.1 MGP_129S1SvImJ_G0029986.1 mouse_genomes_project 5 120391356 120439540 + MGP_129S1SvImJ_P0073802 Vsig10 protein_coding protein_coding MGP_129S1SvImJ_T0073803.1 MGP_129S1SvImJ_G0029986.1 mouse_genomes_project 5 120391566 120437646 + MGP_129S1SvImJ_P0073803 Vsig10 protein_coding protein_coding MGP_129S1SvImJ_T0073804.1 MGP_129S1SvImJ_G0029986.1 mouse_genomes_project 5 120391592 120419740 + Vsig10 protein_coding retained_intron MGP_129S1SvImJ_T0073805.1 MGP_129S1SvImJ_G0029986.1 mouse_genomes_project 5 120391635 120398961 + Vsig10 protein_coding retained_intron MGP_129S1SvImJ_T0073806.1 MGP_129S1SvImJ_G0029986.1 mouse_genomes_project 5 120397454 120439532 + Vsig10 protein_coding processed_transcript MGP_129S1SvImJ_T0073807.1 MGP_129S1SvImJ_G0029986.1 mouse_genomes_project 5 120434258 120439540 + Vsig10 protein_coding processed_transcript MGP_129S1SvImJ_T0101918.1 MGP_129S1SvImJ_G0039825.1 mouse_genomes_project 5 30638454 30645203 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101919.1 MGP_129S1SvImJ_G0039825.1 mouse_genomes_project 5 30638458 30645259 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0001536.1 MGP_129S1SvImJ_G0001454.1 mouse_genomes_project 5 36430376 36430671 - TEC TEC MGP_129S1SvImJ_T0004656.1 MGP_129S1SvImJ_G0004037.1 mouse_genomes_project 5 16647001 16674220 - 4921504A21Rik antisense antisense MGP_129S1SvImJ_T0004657.1 MGP_129S1SvImJ_G0004037.1 mouse_genomes_project 5 16647924 16673833 - 4921504A21Rik antisense antisense MGP_129S1SvImJ_T0099975.1 MGP_129S1SvImJ_G0038042.1 mouse_genomes_project 5 144422565 144422672 + Gm26285 snRNA snRNA MGP_129S1SvImJ_T0001620.1 MGP_129S1SvImJ_G0001537.1 mouse_genomes_project 5 53930128 53932809 + TEC TEC MGP_129S1SvImJ_T0010760.1 MGP_129S1SvImJ_G0008876.1 mouse_genomes_project 5 155067489 155067567 - miRNA miRNA MGP_129S1SvImJ_T0073989.1 MGP_129S1SvImJ_G0030030.1 mouse_genomes_project 5 125010858 125014348 - MGP_129S1SvImJ_P0073989 protein_coding protein_coding MGP_129S1SvImJ_T0004867.1 MGP_129S1SvImJ_G0004191.1 mouse_genomes_project 5 136140337 136143837 + 4930563F08Rik antisense antisense MGP_129S1SvImJ_T0001618.1 MGP_129S1SvImJ_G0001535.1 mouse_genomes_project 5 52992303 52996370 + TEC TEC MGP_129S1SvImJ_T0073827.1 MGP_129S1SvImJ_G0029991.1 mouse_genomes_project 5 121109679 121145609 + MGP_129S1SvImJ_P0073827 Fbxo21 protein_coding protein_coding MGP_129S1SvImJ_T0073828.1 MGP_129S1SvImJ_G0029991.1 mouse_genomes_project 5 121109723 121120541 + Fbxo21 protein_coding retained_intron MGP_129S1SvImJ_T0073829.1 MGP_129S1SvImJ_G0029991.1 mouse_genomes_project 5 121109733 121145608 + MGP_129S1SvImJ_P0073829 Fbxo21 protein_coding protein_coding MGP_129S1SvImJ_T0073830.1 MGP_129S1SvImJ_G0029991.1 mouse_genomes_project 5 121109777 121145610 + MGP_129S1SvImJ_P0073830 Fbxo21 protein_coding protein_coding MGP_129S1SvImJ_T0073831.1 MGP_129S1SvImJ_G0029991.1 mouse_genomes_project 5 121110263 121119194 + Fbxo21 protein_coding processed_transcript MGP_129S1SvImJ_T0073832.1 MGP_129S1SvImJ_G0029991.1 mouse_genomes_project 5 121112289 121119080 + Fbxo21 protein_coding processed_transcript MGP_129S1SvImJ_T0072430.1 MGP_129S1SvImJ_G0029690.1 mouse_genomes_project 5 88646891 88653836 - MGP_129S1SvImJ_P0072430 Csn2 protein_coding protein_coding MGP_129S1SvImJ_T0072431.1 MGP_129S1SvImJ_G0029690.1 mouse_genomes_project 5 88646892 88653615 - Csn2 protein_coding retained_intron MGP_129S1SvImJ_T0072432.1 MGP_129S1SvImJ_G0029690.1 mouse_genomes_project 5 88646895 88650916 - Csn2 protein_coding retained_intron MGP_129S1SvImJ_T0072433.1 MGP_129S1SvImJ_G0029690.1 mouse_genomes_project 5 88646895 88653631 - MGP_129S1SvImJ_P0072433 Csn2 protein_coding protein_coding MGP_129S1SvImJ_T0072434.1 MGP_129S1SvImJ_G0029690.1 mouse_genomes_project 5 88647072 88653615 - MGP_129S1SvImJ_P0072434 Csn2 protein_coding protein_coding MGP_129S1SvImJ_T0072435.1 MGP_129S1SvImJ_G0029690.1 mouse_genomes_project 5 88647136 88653627 - MGP_129S1SvImJ_P0072435 Csn2 protein_coding protein_coding MGP_129S1SvImJ_T0072436.1 MGP_129S1SvImJ_G0029690.1 mouse_genomes_project 5 88647196 88653627 - MGP_129S1SvImJ_P0072436 Csn2 protein_coding protein_coding MGP_129S1SvImJ_T0072437.1 MGP_129S1SvImJ_G0029690.1 mouse_genomes_project 5 88648103 88652352 - MGP_129S1SvImJ_P0072437 Csn2 protein_coding protein_coding MGP_129S1SvImJ_T0072438.1 MGP_129S1SvImJ_G0029690.1 mouse_genomes_project 5 88648823 88650791 - Csn2 protein_coding processed_transcript MGP_129S1SvImJ_T0072439.1 MGP_129S1SvImJ_G0029690.1 mouse_genomes_project 5 88652068 88653627 - Csn2 protein_coding retained_intron MGP_129S1SvImJ_T0072440.1 MGP_129S1SvImJ_G0029690.1 mouse_genomes_project 5 88652152 88653627 - Csn2 protein_coding retained_intron MGP_129S1SvImJ_T0074247.1 MGP_129S1SvImJ_G0030066.1 mouse_genomes_project 5 126858366 126952092 + Psmd9 protein_coding processed_transcript MGP_129S1SvImJ_T0074254.1 MGP_129S1SvImJ_G0030066.1 mouse_genomes_project 5 126939009 126957783 + Psmd9 protein_coding processed_transcript MGP_129S1SvImJ_T0074255.1 MGP_129S1SvImJ_G0030066.1 mouse_genomes_project 5 126939009 126968025 + MGP_129S1SvImJ_P0074255 Psmd9 protein_coding protein_coding MGP_129S1SvImJ_T0074256.1 MGP_129S1SvImJ_G0030066.1 mouse_genomes_project 5 126939077 126939855 + Psmd9 protein_coding retained_intron MGP_129S1SvImJ_T0074257.1 MGP_129S1SvImJ_G0030066.1 mouse_genomes_project 5 126939768 126941688 + Psmd9 protein_coding TEC MGP_129S1SvImJ_T0074258.1 MGP_129S1SvImJ_G0030066.1 mouse_genomes_project 5 126945382 126966416 + MGP_129S1SvImJ_P0074258 Psmd9 protein_coding protein_coding MGP_129S1SvImJ_T0074259.1 MGP_129S1SvImJ_G0030066.1 mouse_genomes_project 5 126954336 126966416 + MGP_129S1SvImJ_P0074259 Psmd9 protein_coding protein_coding MGP_129S1SvImJ_T0102563.1 MGP_129S1SvImJ_G0040396.1 mouse_genomes_project 5 87836161 87852057 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0072831.1 MGP_129S1SvImJ_G0029787.1 mouse_genomes_project 5 102005040 102039048 + MGP_129S1SvImJ_P0072831 Cops4 protein_coding protein_coding MGP_129S1SvImJ_T0072832.1 MGP_129S1SvImJ_G0029787.1 mouse_genomes_project 5 102005174 102021044 + Cops4 protein_coding retained_intron MGP_129S1SvImJ_T0072833.1 MGP_129S1SvImJ_G0029787.1 mouse_genomes_project 5 102005188 102029089 + MGP_129S1SvImJ_P0072833 Cops4 protein_coding protein_coding MGP_129S1SvImJ_T0072834.1 MGP_129S1SvImJ_G0029787.1 mouse_genomes_project 5 102005203 102022340 + MGP_129S1SvImJ_P0072834 Cops4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072835.1 MGP_129S1SvImJ_G0029787.1 mouse_genomes_project 5 102005468 102028975 + MGP_129S1SvImJ_P0072835 Cops4 protein_coding protein_coding MGP_129S1SvImJ_T0072836.1 MGP_129S1SvImJ_G0029787.1 mouse_genomes_project 5 102017588 102035207 + MGP_129S1SvImJ_P0072836 Cops4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072837.1 MGP_129S1SvImJ_G0029787.1 mouse_genomes_project 5 102021190 102039025 + Cops4 protein_coding retained_intron MGP_129S1SvImJ_T0001892.1 MGP_129S1SvImJ_G0001806.1 mouse_genomes_project 5 136807278 136808104 - TEC TEC MGP_129S1SvImJ_T0071105.1 MGP_129S1SvImJ_G0029455.1 mouse_genomes_project 5 32106320 32141616 - MGP_129S1SvImJ_P0071105 Nelfa protein_coding protein_coding MGP_129S1SvImJ_T0071106.1 MGP_129S1SvImJ_G0029455.1 mouse_genomes_project 5 32122768 32141453 - Nelfa protein_coding retained_intron MGP_129S1SvImJ_T0075832.1 MGP_129S1SvImJ_G0030361.1 mouse_genomes_project 5 150610074 150619135 - MGP_129S1SvImJ_P0075832 Atp5j2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0075833.1 MGP_129S1SvImJ_G0030361.1 mouse_genomes_project 5 150611331 150619682 - MGP_129S1SvImJ_P0075833 Atp5j2 protein_coding protein_coding MGP_129S1SvImJ_T0075834.1 MGP_129S1SvImJ_G0030361.1 mouse_genomes_project 5 150611339 150619212 - MGP_129S1SvImJ_P0075834 Atp5j2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075835.1 MGP_129S1SvImJ_G0030361.1 mouse_genomes_project 5 150611342 150619212 - MGP_129S1SvImJ_P0075835 Atp5j2 protein_coding protein_coding MGP_129S1SvImJ_T0075836.1 MGP_129S1SvImJ_G0030361.1 mouse_genomes_project 5 150612019 150619131 - MGP_129S1SvImJ_P0075836 Atp5j2 protein_coding protein_coding MGP_129S1SvImJ_T0075837.1 MGP_129S1SvImJ_G0030361.1 mouse_genomes_project 5 150617047 150619148 - Atp5j2 protein_coding retained_intron MGP_129S1SvImJ_T0015087.1 MGP_129S1SvImJ_G0013176.1 mouse_genomes_project 5 91633602 91634160 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014940.1 MGP_129S1SvImJ_G0013029.1 mouse_genomes_project 5 25973680 25977566 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102566.1 MGP_129S1SvImJ_G0040399.1 mouse_genomes_project 5 88044559 88057623 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0071449.1 MGP_129S1SvImJ_G0029512.1 mouse_genomes_project 5 36758005 36898717 - MGP_129S1SvImJ_P0071449 Slc2a9 protein_coding protein_coding MGP_129S1SvImJ_T0071450.1 MGP_129S1SvImJ_G0029512.1 mouse_genomes_project 5 36758005 36895638 - MGP_129S1SvImJ_P0071450 Slc2a9 protein_coding protein_coding MGP_129S1SvImJ_T0071451.1 MGP_129S1SvImJ_G0029512.1 mouse_genomes_project 5 36758006 36907540 - MGP_129S1SvImJ_P0071451 Slc2a9 protein_coding protein_coding MGP_129S1SvImJ_T0071452.1 MGP_129S1SvImJ_G0029512.1 mouse_genomes_project 5 36758038 36918489 - MGP_129S1SvImJ_P0071452 Slc2a9 protein_coding protein_coding MGP_129S1SvImJ_T0071453.1 MGP_129S1SvImJ_G0029512.1 mouse_genomes_project 5 36758371 36919407 - MGP_129S1SvImJ_P0071453 Slc2a9 protein_coding protein_coding MGP_129S1SvImJ_T0071454.1 MGP_129S1SvImJ_G0029512.1 mouse_genomes_project 5 36758371 36895490 - MGP_129S1SvImJ_P0071454 Slc2a9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071455.1 MGP_129S1SvImJ_G0029512.1 mouse_genomes_project 5 36759815 36895463 - MGP_129S1SvImJ_P0071455 Slc2a9 protein_coding protein_coding MGP_129S1SvImJ_T0071456.1 MGP_129S1SvImJ_G0029512.1 mouse_genomes_project 5 36792356 36895514 - MGP_129S1SvImJ_P0071456 Slc2a9 protein_coding protein_coding MGP_129S1SvImJ_T0071457.1 MGP_129S1SvImJ_G0029512.1 mouse_genomes_project 5 36828244 36857402 - Slc2a9 protein_coding processed_transcript MGP_129S1SvImJ_T0071458.1 MGP_129S1SvImJ_G0029512.1 mouse_genomes_project 5 36857222 36918416 - MGP_129S1SvImJ_P0071458 Slc2a9 protein_coding protein_coding MGP_129S1SvImJ_T0071459.1 MGP_129S1SvImJ_G0029512.1 mouse_genomes_project 5 36891650 36918498 - Slc2a9 protein_coding processed_transcript MGP_129S1SvImJ_T0071460.1 MGP_129S1SvImJ_G0029512.1 mouse_genomes_project 5 36898323 36907513 - Slc2a9 protein_coding retained_intron MGP_129S1SvImJ_T0008206.1 MGP_129S1SvImJ_G0006690.1 mouse_genomes_project 5 88882162 88887560 + BC037156 lincRNA lincRNA MGP_129S1SvImJ_T0008056.1 MGP_129S1SvImJ_G0006581.1 mouse_genomes_project 5 13177393 13204444 - 4930519H02Rik lincRNA lincRNA MGP_129S1SvImJ_T0008057.1 MGP_129S1SvImJ_G0006581.1 mouse_genomes_project 5 13180490 13204507 - 4930519H02Rik lincRNA lincRNA MGP_129S1SvImJ_T0014950.1 MGP_129S1SvImJ_G0013039.1 mouse_genomes_project 5 30254924 30255507 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072800.1 MGP_129S1SvImJ_G0029783.1 mouse_genomes_project 5 101490655 101522569 + MGP_129S1SvImJ_P0072800 Enoph1 protein_coding protein_coding MGP_129S1SvImJ_T0072801.1 MGP_129S1SvImJ_G0029783.1 mouse_genomes_project 5 101490714 101522569 + MGP_129S1SvImJ_P0072801 Enoph1 protein_coding protein_coding MGP_129S1SvImJ_T0072802.1 MGP_129S1SvImJ_G0029783.1 mouse_genomes_project 5 101490738 101513715 + Enoph1 protein_coding retained_intron MGP_129S1SvImJ_T0072803.1 MGP_129S1SvImJ_G0029783.1 mouse_genomes_project 5 101514329 101518007 + Enoph1 protein_coding processed_transcript MGP_129S1SvImJ_T0001915.1 MGP_129S1SvImJ_G0001828.1 mouse_genomes_project 5 146470010 146470691 - TEC TEC MGP_129S1SvImJ_T0015181.1 MGP_129S1SvImJ_G0013270.1 mouse_genomes_project 5 137845775 137846741 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0071792.1 MGP_129S1SvImJ_G0029573.1 mouse_genomes_project 5 64821241 64888684 + MGP_129S1SvImJ_P0071792 Wdr19 protein_coding protein_coding MGP_129S1SvImJ_T0071793.1 MGP_129S1SvImJ_G0029573.1 mouse_genomes_project 5 64821243 64888693 + MGP_129S1SvImJ_P0071793 Wdr19 protein_coding protein_coding MGP_129S1SvImJ_T0071794.1 MGP_129S1SvImJ_G0029573.1 mouse_genomes_project 5 64821245 64826860 + Wdr19 protein_coding retained_intron MGP_129S1SvImJ_T0071795.1 MGP_129S1SvImJ_G0029573.1 mouse_genomes_project 5 64821262 64872983 + Wdr19 protein_coding retained_intron MGP_129S1SvImJ_T0071796.1 MGP_129S1SvImJ_G0029573.1 mouse_genomes_project 5 64821276 64853986 + Wdr19 protein_coding retained_intron MGP_129S1SvImJ_T0071797.1 MGP_129S1SvImJ_G0029573.1 mouse_genomes_project 5 64821285 64847275 + Wdr19 protein_coding retained_intron MGP_129S1SvImJ_T0071798.1 MGP_129S1SvImJ_G0029573.1 mouse_genomes_project 5 64824160 64888688 + Wdr19 protein_coding retained_intron MGP_129S1SvImJ_T0071799.1 MGP_129S1SvImJ_G0029573.1 mouse_genomes_project 5 64884702 64888687 + MGP_129S1SvImJ_P0071799 Wdr19 protein_coding protein_coding MGP_129S1SvImJ_T0015164.1 MGP_129S1SvImJ_G0013253.1 mouse_genomes_project 5 120366873 120367251 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101187.1 MGP_129S1SvImJ_G0039254.1 mouse_genomes_project 5 56395326 56395454 - Gm23015 snoRNA snoRNA MGP_129S1SvImJ_T0015044.1 MGP_129S1SvImJ_G0013133.1 mouse_genomes_project 5 72495242 72495501 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101222.1 MGP_129S1SvImJ_G0039289.1 mouse_genomes_project 5 152446095 152446225 + Gm23202 snoRNA snoRNA MGP_129S1SvImJ_T0099979.1 MGP_129S1SvImJ_G0038046.1 mouse_genomes_project 5 156493139 156493240 - Gm23641 snRNA snRNA MGP_129S1SvImJ_T0001725.1 MGP_129S1SvImJ_G0001640.1 mouse_genomes_project 5 81841127 81844572 + TEC TEC MGP_129S1SvImJ_T0074449.1 MGP_129S1SvImJ_G0030096.1 mouse_genomes_project 5 128287703 128304450 - MGP_129S1SvImJ_P0074449 Rilpl2 protein_coding protein_coding MGP_129S1SvImJ_T0074450.1 MGP_129S1SvImJ_G0030096.1 mouse_genomes_project 5 128301331 128304394 - Rilpl2 protein_coding retained_intron MGP_129S1SvImJ_T0004662.1 MGP_129S1SvImJ_G0004042.1 mouse_genomes_project 5 22056521 22059815 + Gm15589 antisense antisense MGP_129S1SvImJ_T0099933.1 MGP_129S1SvImJ_G0038000.1 mouse_genomes_project 5 80595220 80595327 + Gm24304 snRNA snRNA MGP_129S1SvImJ_T0001735.1 MGP_129S1SvImJ_G0001650.1 mouse_genomes_project 5 93356177 93356735 - TEC TEC MGP_129S1SvImJ_T0008299.1 MGP_129S1SvImJ_G0006755.1 mouse_genomes_project 5 114324115 114342690 + Gm42487 lincRNA lincRNA MGP_129S1SvImJ_T0008300.1 MGP_129S1SvImJ_G0006755.1 mouse_genomes_project 5 114325945 114342607 + Gm42487 lincRNA lincRNA MGP_129S1SvImJ_T0072585.1 MGP_129S1SvImJ_G0029737.1 mouse_genomes_project 5 92442395 92489578 - MGP_129S1SvImJ_P0072585 Btc protein_coding protein_coding MGP_129S1SvImJ_T0072586.1 MGP_129S1SvImJ_G0029737.1 mouse_genomes_project 5 92442523 92489406 - Btc protein_coding retained_intron MGP_129S1SvImJ_T0072587.1 MGP_129S1SvImJ_G0029737.1 mouse_genomes_project 5 92444053 92489444 - MGP_129S1SvImJ_P0072587 Btc protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072588.1 MGP_129S1SvImJ_G0029737.1 mouse_genomes_project 5 92450924 92462203 - Btc protein_coding processed_transcript MGP_129S1SvImJ_T0001563.1 MGP_129S1SvImJ_G0001481.1 mouse_genomes_project 5 43422637 43425154 - TEC TEC MGP_129S1SvImJ_T0008151.1 MGP_129S1SvImJ_G0006648.1 mouse_genomes_project 5 59387069 59407696 - 4933402J10Rik lincRNA lincRNA MGP_129S1SvImJ_T0008152.1 MGP_129S1SvImJ_G0006648.1 mouse_genomes_project 5 59387074 59407690 - 4933402J10Rik lincRNA lincRNA MGP_129S1SvImJ_T0015127.1 MGP_129S1SvImJ_G0013216.1 mouse_genomes_project 5 109254272 109255017 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098608.1 MGP_129S1SvImJ_G0036693.1 mouse_genomes_project 5 120260812 120260933 + n-R5s174 rRNA rRNA MGP_129S1SvImJ_T0072521.1 MGP_129S1SvImJ_G0029718.1 mouse_genomes_project 5 91277289 91286616 - MGP_129S1SvImJ_P0072521 Cox18 protein_coding protein_coding MGP_129S1SvImJ_T0072522.1 MGP_129S1SvImJ_G0029718.1 mouse_genomes_project 5 91277289 91286587 - MGP_129S1SvImJ_P0072522 Cox18 protein_coding protein_coding MGP_129S1SvImJ_T0072523.1 MGP_129S1SvImJ_G0029718.1 mouse_genomes_project 5 91277292 91278147 - Cox18 protein_coding processed_transcript MGP_129S1SvImJ_T0072524.1 MGP_129S1SvImJ_G0029718.1 mouse_genomes_project 5 91277292 91280444 - Cox18 protein_coding retained_intron MGP_129S1SvImJ_T0072525.1 MGP_129S1SvImJ_G0029718.1 mouse_genomes_project 5 91277295 91278588 - Cox18 protein_coding retained_intron MGP_129S1SvImJ_T0072526.1 MGP_129S1SvImJ_G0029718.1 mouse_genomes_project 5 91280098 91282357 - Cox18 protein_coding retained_intron MGP_129S1SvImJ_T0072527.1 MGP_129S1SvImJ_G0029718.1 mouse_genomes_project 5 91281499 91286554 - MGP_129S1SvImJ_P0072527 Cox18 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0018232.1 MGP_129S1SvImJ_G0015616.1 mouse_genomes_project 5 144095893 144099011 - Gm15672 processed_transcript processed_transcript MGP_129S1SvImJ_T0008229.1 MGP_129S1SvImJ_G0006710.1 mouse_genomes_project 5 100418531 100553982 - Gm43251 lincRNA lincRNA MGP_129S1SvImJ_T0001702.1 MGP_129S1SvImJ_G0001618.1 mouse_genomes_project 5 72763741 72765848 - TEC TEC MGP_129S1SvImJ_T0074845.1 MGP_129S1SvImJ_G0030164.1 mouse_genomes_project 5 139361977 139367118 - MGP_129S1SvImJ_P0074845 Wbscr28 protein_coding protein_coding MGP_129S1SvImJ_T0074846.1 MGP_129S1SvImJ_G0030164.1 mouse_genomes_project 5 139361978 139367118 - MGP_129S1SvImJ_P0074846 Wbscr28 protein_coding protein_coding MGP_129S1SvImJ_T0018190.1 MGP_129S1SvImJ_G0015602.1 mouse_genomes_project 5 65451239 65454115 - N4bp2os processed_transcript antisense MGP_129S1SvImJ_T0018191.1 MGP_129S1SvImJ_G0015602.1 mouse_genomes_project 5 65451693 65453606 - N4bp2os processed_transcript antisense MGP_129S1SvImJ_T0018192.1 MGP_129S1SvImJ_G0015602.1 mouse_genomes_project 5 65452620 65454628 - N4bp2os processed_transcript retained_intron MGP_129S1SvImJ_T0014944.1 MGP_129S1SvImJ_G0013033.1 mouse_genomes_project 5 27755713 27756228 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001516.1 MGP_129S1SvImJ_G0001435.1 mouse_genomes_project 5 30193372 30196268 - TEC TEC MGP_129S1SvImJ_T0001517.1 MGP_129S1SvImJ_G0001435.1 mouse_genomes_project 5 30193372 30196271 - TEC TEC MGP_129S1SvImJ_T0073680.1 MGP_129S1SvImJ_G0029966.1 mouse_genomes_project 5 118184190 118192133 - MGP_129S1SvImJ_P0073680 Gatc protein_coding protein_coding MGP_129S1SvImJ_T0014928.1 MGP_129S1SvImJ_G0013017.1 mouse_genomes_project 5 23225846 23226096 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010745.1 MGP_129S1SvImJ_G0008861.1 mouse_genomes_project 5 142025324 142025421 + Mir8116 miRNA miRNA MGP_129S1SvImJ_T0008342.1 MGP_129S1SvImJ_G0006782.1 mouse_genomes_project 5 121572237 121572761 - Gm28563 lincRNA lincRNA MGP_129S1SvImJ_T0001764.1 MGP_129S1SvImJ_G0001679.1 mouse_genomes_project 5 107384278 107386450 + TEC TEC MGP_129S1SvImJ_T0001667.1 MGP_129S1SvImJ_G0001583.1 mouse_genomes_project 5 65666258 65667873 + TEC TEC MGP_129S1SvImJ_T0001473.1 MGP_129S1SvImJ_G0001394.1 mouse_genomes_project 5 10841947 10844146 + TEC TEC MGP_129S1SvImJ_T0072182.1 MGP_129S1SvImJ_G0029636.1 mouse_genomes_project 5 75186260 75188553 + MGP_129S1SvImJ_P0072182 Gsx2 protein_coding protein_coding MGP_129S1SvImJ_T0072183.1 MGP_129S1SvImJ_G0029636.1 mouse_genomes_project 5 75186261 75188285 + MGP_129S1SvImJ_P0072183 Gsx2 protein_coding protein_coding MGP_129S1SvImJ_T0070685.1 MGP_129S1SvImJ_G0029394.1 mouse_genomes_project 5 28624661 28632120 + MGP_129S1SvImJ_P0070685 Cenpa protein_coding protein_coding MGP_129S1SvImJ_T0070686.1 MGP_129S1SvImJ_G0029394.1 mouse_genomes_project 5 28624781 28631668 + MGP_129S1SvImJ_P0070686 Cenpa protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070687.1 MGP_129S1SvImJ_G0029394.1 mouse_genomes_project 5 28624796 28631605 + MGP_129S1SvImJ_P0070687 Cenpa protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070688.1 MGP_129S1SvImJ_G0029394.1 mouse_genomes_project 5 28624819 28631699 + Cenpa protein_coding retained_intron MGP_129S1SvImJ_T0070689.1 MGP_129S1SvImJ_G0029394.1 mouse_genomes_project 5 28624827 28627140 + MGP_129S1SvImJ_P0070689 Cenpa protein_coding protein_coding MGP_129S1SvImJ_T0070690.1 MGP_129S1SvImJ_G0029394.1 mouse_genomes_project 5 28624841 28631354 + MGP_129S1SvImJ_P0070690 Cenpa protein_coding protein_coding MGP_129S1SvImJ_T0070691.1 MGP_129S1SvImJ_G0029394.1 mouse_genomes_project 5 28624844 28628052 + Cenpa protein_coding retained_intron MGP_129S1SvImJ_T0070692.1 MGP_129S1SvImJ_G0029394.1 mouse_genomes_project 5 28624852 28631698 + MGP_129S1SvImJ_P0070692 Cenpa protein_coding unknown_likely_coding MGP_129S1SvImJ_T0070693.1 MGP_129S1SvImJ_G0029394.1 mouse_genomes_project 5 28624858 28631699 + MGP_129S1SvImJ_P0070693 Cenpa protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070694.1 MGP_129S1SvImJ_G0029394.1 mouse_genomes_project 5 28624882 28631676 + MGP_129S1SvImJ_P0070694 Cenpa protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070695.1 MGP_129S1SvImJ_G0029394.1 mouse_genomes_project 5 28629241 28631492 + Cenpa protein_coding retained_intron MGP_129S1SvImJ_T0001629.1 MGP_129S1SvImJ_G0001546.1 mouse_genomes_project 5 57209920 57212645 + TEC TEC MGP_129S1SvImJ_T0008172.1 MGP_129S1SvImJ_G0006664.1 mouse_genomes_project 5 73260906 73277643 - 1700025M24Rik lincRNA lincRNA MGP_129S1SvImJ_T0008173.1 MGP_129S1SvImJ_G0006664.1 mouse_genomes_project 5 73260906 73277655 - 1700025M24Rik lincRNA lincRNA MGP_129S1SvImJ_T0008174.1 MGP_129S1SvImJ_G0006664.1 mouse_genomes_project 5 73260924 73277649 - 1700025M24Rik lincRNA lincRNA MGP_129S1SvImJ_T0001596.1 MGP_129S1SvImJ_G0001513.1 mouse_genomes_project 5 47958596 47960230 - TEC TEC MGP_129S1SvImJ_T0010721.1 MGP_129S1SvImJ_G0008837.1 mouse_genomes_project 5 113140732 113140799 - Mir7026 miRNA miRNA MGP_129S1SvImJ_T0070009.1 MGP_129S1SvImJ_G0029264.1 mouse_genomes_project 5 665657 690375 + MGP_129S1SvImJ_P0070009 Lrrd1 protein_coding protein_coding MGP_129S1SvImJ_T0070010.1 MGP_129S1SvImJ_G0029264.1 mouse_genomes_project 5 665671 670684 + MGP_129S1SvImJ_P0070010 Lrrd1 protein_coding protein_coding MGP_129S1SvImJ_T0004707.1 MGP_129S1SvImJ_G0004077.1 mouse_genomes_project 5 44349053 44354089 + 9630001P10Rik antisense antisense MGP_129S1SvImJ_T0004708.1 MGP_129S1SvImJ_G0004077.1 mouse_genomes_project 5 44349607 44355790 + 9630001P10Rik antisense antisense MGP_129S1SvImJ_T0004709.1 MGP_129S1SvImJ_G0004077.1 mouse_genomes_project 5 44349701 44354412 + 9630001P10Rik antisense antisense MGP_129S1SvImJ_T0014986.1 MGP_129S1SvImJ_G0013075.1 mouse_genomes_project 5 46478821 46479269 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0071880.1 MGP_129S1SvImJ_G0029586.1 mouse_genomes_project 5 65682195 65692629 - 9130230L23Rik protein_coding retained_intron MGP_129S1SvImJ_T0071881.1 MGP_129S1SvImJ_G0029586.1 mouse_genomes_project 5 65690559 65707546 - MGP_129S1SvImJ_P0071881 9130230L23Rik protein_coding protein_coding MGP_129S1SvImJ_T0071882.1 MGP_129S1SvImJ_G0029586.1 mouse_genomes_project 5 65690906 65703658 - MGP_129S1SvImJ_P0071882 9130230L23Rik protein_coding protein_coding MGP_129S1SvImJ_T0071883.1 MGP_129S1SvImJ_G0029586.1 mouse_genomes_project 5 65691711 65693734 - 9130230L23Rik protein_coding retained_intron MGP_129S1SvImJ_T0071884.1 MGP_129S1SvImJ_G0029586.1 mouse_genomes_project 5 65692747 65704773 - 9130230L23Rik protein_coding retained_intron MGP_129S1SvImJ_T0071885.1 MGP_129S1SvImJ_G0029586.1 mouse_genomes_project 5 65703117 65707546 - 9130230L23Rik protein_coding retained_intron MGP_129S1SvImJ_T0071886.1 MGP_129S1SvImJ_G0029586.1 mouse_genomes_project 5 65704502 65705215 - 9130230L23Rik protein_coding retained_intron MGP_129S1SvImJ_T0076081.1 MGP_129S1SvImJ_G0030411.1 mouse_genomes_project 5 156514763 156537647 - MGP_129S1SvImJ_P0076081 N4bp2l1 protein_coding protein_coding MGP_129S1SvImJ_T0076082.1 MGP_129S1SvImJ_G0030411.1 mouse_genomes_project 5 156514766 156520111 - MGP_129S1SvImJ_P0076082 N4bp2l1 protein_coding protein_coding MGP_129S1SvImJ_T0076083.1 MGP_129S1SvImJ_G0030411.1 mouse_genomes_project 5 156515784 156537584 - MGP_129S1SvImJ_P0076083 N4bp2l1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076084.1 MGP_129S1SvImJ_G0030411.1 mouse_genomes_project 5 156517119 156540310 - MGP_129S1SvImJ_P0076084 N4bp2l1 protein_coding protein_coding MGP_129S1SvImJ_T0076085.1 MGP_129S1SvImJ_G0030411.1 mouse_genomes_project 5 156534873 156537650 - MGP_129S1SvImJ_P0076085 N4bp2l1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076086.1 MGP_129S1SvImJ_G0030411.1 mouse_genomes_project 5 156534876 156537622 - MGP_129S1SvImJ_P0076086 N4bp2l1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076087.1 MGP_129S1SvImJ_G0030411.1 mouse_genomes_project 5 156535564 156536891 - N4bp2l1 protein_coding retained_intron MGP_129S1SvImJ_T0001685.1 MGP_129S1SvImJ_G0001601.1 mouse_genomes_project 5 67417434 67418944 - TEC TEC MGP_129S1SvImJ_T0075768.1 MGP_129S1SvImJ_G0030352.1 mouse_genomes_project 5 150161682 150162533 + Trrap protein_coding processed_transcript MGP_129S1SvImJ_T0075769.1 MGP_129S1SvImJ_G0030352.1 mouse_genomes_project 5 150161933 150181709 + Trrap protein_coding retained_intron MGP_129S1SvImJ_T0075770.1 MGP_129S1SvImJ_G0030352.1 mouse_genomes_project 5 150162006 150254958 + MGP_129S1SvImJ_P0075770 Trrap protein_coding unknown_likely_coding MGP_129S1SvImJ_T0075771.1 MGP_129S1SvImJ_G0030352.1 mouse_genomes_project 5 150162385 150170912 + MGP_129S1SvImJ_P0075771 Trrap protein_coding protein_coding MGP_129S1SvImJ_T0075772.1 MGP_129S1SvImJ_G0030352.1 mouse_genomes_project 5 150162635 150254951 + MGP_129S1SvImJ_P0075772 Trrap protein_coding protein_coding MGP_129S1SvImJ_T0075773.1 MGP_129S1SvImJ_G0030352.1 mouse_genomes_project 5 150164930 150254924 + MGP_129S1SvImJ_P0075773 Trrap protein_coding protein_coding MGP_129S1SvImJ_T0075774.1 MGP_129S1SvImJ_G0030352.1 mouse_genomes_project 5 150164930 150254949 + MGP_129S1SvImJ_P0075774 Trrap protein_coding protein_coding MGP_129S1SvImJ_T0075775.1 MGP_129S1SvImJ_G0030352.1 mouse_genomes_project 5 150179336 150254949 + MGP_129S1SvImJ_P0075775 Trrap protein_coding protein_coding MGP_129S1SvImJ_T0075776.1 MGP_129S1SvImJ_G0030352.1 mouse_genomes_project 5 150185259 150187457 + Trrap protein_coding retained_intron MGP_129S1SvImJ_T0075777.1 MGP_129S1SvImJ_G0030352.1 mouse_genomes_project 5 150198492 150229732 + Trrap protein_coding retained_intron MGP_129S1SvImJ_T0075778.1 MGP_129S1SvImJ_G0030352.1 mouse_genomes_project 5 150205791 150207543 + Trrap protein_coding retained_intron MGP_129S1SvImJ_T0075779.1 MGP_129S1SvImJ_G0030352.1 mouse_genomes_project 5 150213553 150218329 + Trrap protein_coding retained_intron MGP_129S1SvImJ_T0075780.1 MGP_129S1SvImJ_G0030352.1 mouse_genomes_project 5 150234205 150235665 + Trrap protein_coding retained_intron MGP_129S1SvImJ_T0075781.1 MGP_129S1SvImJ_G0030352.1 mouse_genomes_project 5 150250919 150254950 + Trrap protein_coding retained_intron MGP_129S1SvImJ_T0075782.1 MGP_129S1SvImJ_G0030352.1 mouse_genomes_project 5 150252458 150254512 + Trrap protein_coding processed_transcript MGP_129S1SvImJ_T0070171.1 MGP_129S1SvImJ_G0029290.1 mouse_genomes_project 5 6101809 6169150 + MGP_129S1SvImJ_P0070171 Tmem243 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070172.1 MGP_129S1SvImJ_G0029290.1 mouse_genomes_project 5 6101870 6122519 + MGP_129S1SvImJ_P0070172 Tmem243 protein_coding protein_coding MGP_129S1SvImJ_T0070191.1 MGP_129S1SvImJ_G0029290.1 mouse_genomes_project 5 6166802 6172112 + Tmem243 protein_coding processed_transcript MGP_129S1SvImJ_T0004886.1 MGP_129S1SvImJ_G0004207.1 mouse_genomes_project 5 143113833 143116452 + 6330418K02Rik antisense antisense MGP_129S1SvImJ_T0004887.1 MGP_129S1SvImJ_G0004207.1 mouse_genomes_project 5 143113844 143116123 + 6330418K02Rik antisense antisense MGP_129S1SvImJ_T0004888.1 MGP_129S1SvImJ_G0004207.1 mouse_genomes_project 5 143113859 143116452 + 6330418K02Rik antisense antisense MGP_129S1SvImJ_T0004889.1 MGP_129S1SvImJ_G0004207.1 mouse_genomes_project 5 143113898 143116020 + 6330418K02Rik antisense antisense MGP_129S1SvImJ_T0004890.1 MGP_129S1SvImJ_G0004207.1 mouse_genomes_project 5 143115334 143115874 + 6330418K02Rik antisense antisense MGP_129S1SvImJ_T0072758.1 MGP_129S1SvImJ_G0029772.1 mouse_genomes_project 5 99536856 99544866 + MGP_129S1SvImJ_P0072758 Prdm8 protein_coding protein_coding MGP_129S1SvImJ_T0070416.1 MGP_129S1SvImJ_G0029338.1 mouse_genomes_project 5 22087432 22107727 + MGP_129S1SvImJ_P0070416 Nos3 protein_coding protein_coding MGP_129S1SvImJ_T0070417.1 MGP_129S1SvImJ_G0029338.1 mouse_genomes_project 5 22087432 22107579 + MGP_129S1SvImJ_P0070417 Nos3 protein_coding protein_coding MGP_129S1SvImJ_T0073933.1 MGP_129S1SvImJ_G0030016.1 mouse_genomes_project 5 124268619 124280205 + MGP_129S1SvImJ_P0073933 Oas1f protein_coding protein_coding MGP_129S1SvImJ_T0073934.1 MGP_129S1SvImJ_G0030016.1 mouse_genomes_project 5 124269622 124280081 + MGP_129S1SvImJ_P0073934 Oas1f protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0008294.1 MGP_129S1SvImJ_G0006752.1 mouse_genomes_project 5 114110173 114110842 + Gm42489 lincRNA lincRNA MGP_129S1SvImJ_T0001543.1 MGP_129S1SvImJ_G0001461.1 mouse_genomes_project 5 41876702 41877914 + TEC TEC MGP_129S1SvImJ_T0001664.1 MGP_129S1SvImJ_G0001580.1 mouse_genomes_project 5 65558301 65559004 + TEC TEC MGP_129S1SvImJ_T0014909.1 MGP_129S1SvImJ_G0012998.1 mouse_genomes_project 5 19870212 19870584 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008184.1 MGP_129S1SvImJ_G0006673.1 mouse_genomes_project 5 75882465 75890611 + Gm43101 lincRNA lincRNA MGP_129S1SvImJ_T0008185.1 MGP_129S1SvImJ_G0006673.1 mouse_genomes_project 5 75889474 75890612 + Gm43101 lincRNA lincRNA MGP_129S1SvImJ_T0074909.1 MGP_129S1SvImJ_G0030177.1 mouse_genomes_project 5 139690220 139753114 + MGP_129S1SvImJ_P0074909 Baz1b protein_coding protein_coding MGP_129S1SvImJ_T0074910.1 MGP_129S1SvImJ_G0030177.1 mouse_genomes_project 5 139690606 139753093 + MGP_129S1SvImJ_P0074910 Baz1b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0074911.1 MGP_129S1SvImJ_G0030177.1 mouse_genomes_project 5 139701568 139705439 + Baz1b protein_coding retained_intron MGP_129S1SvImJ_T0074912.1 MGP_129S1SvImJ_G0030177.1 mouse_genomes_project 5 139711631 139717582 + Baz1b protein_coding retained_intron MGP_129S1SvImJ_T0074913.1 MGP_129S1SvImJ_G0030177.1 mouse_genomes_project 5 139714129 139723779 + Baz1b protein_coding retained_intron MGP_129S1SvImJ_T0074914.1 MGP_129S1SvImJ_G0030177.1 mouse_genomes_project 5 139749373 139751167 + Baz1b protein_coding retained_intron MGP_129S1SvImJ_T0001519.1 MGP_129S1SvImJ_G0001437.1 mouse_genomes_project 5 30560793 30563038 + TEC TEC MGP_129S1SvImJ_T0015174.1 MGP_129S1SvImJ_G0013263.1 mouse_genomes_project 5 126745549 126746007 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070527.1 MGP_129S1SvImJ_G0029358.1 mouse_genomes_project 5 22963242 23005458 + MGP_129S1SvImJ_P0070527 Galntl5 protein_coding protein_coding MGP_129S1SvImJ_T0070528.1 MGP_129S1SvImJ_G0029358.1 mouse_genomes_project 5 22963284 23005456 + MGP_129S1SvImJ_P0070528 Galntl5 protein_coding protein_coding MGP_129S1SvImJ_T0008165.1 MGP_129S1SvImJ_G0006658.1 mouse_genomes_project 5 64226416 64228120 + Gm42565 lincRNA lincRNA MGP_129S1SvImJ_T0008088.1 MGP_129S1SvImJ_G0006601.1 mouse_genomes_project 5 27289066 27300860 + 4632411P08Rik lincRNA lincRNA MGP_129S1SvImJ_T0014918.1 MGP_129S1SvImJ_G0013007.1 mouse_genomes_project 5 20519403 20520011 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004795.1 MGP_129S1SvImJ_G0004142.1 mouse_genomes_project 5 114951228 114954498 - Gm20636 antisense antisense MGP_129S1SvImJ_T0074594.1 MGP_129S1SvImJ_G0030125.1 mouse_genomes_project 5 133611506 133681529 + MGP_129S1SvImJ_P0074594 Sfswap protein_coding protein_coding MGP_129S1SvImJ_T0074595.1 MGP_129S1SvImJ_G0030125.1 mouse_genomes_project 5 133611525 133679783 + MGP_129S1SvImJ_P0074595 Sfswap protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074596.1 MGP_129S1SvImJ_G0030125.1 mouse_genomes_project 5 133611531 133614928 + Sfswap protein_coding retained_intron MGP_129S1SvImJ_T0074597.1 MGP_129S1SvImJ_G0030125.1 mouse_genomes_project 5 133611536 133681526 + Sfswap protein_coding processed_transcript MGP_129S1SvImJ_T0074598.1 MGP_129S1SvImJ_G0030125.1 mouse_genomes_project 5 133611734 133614667 + MGP_129S1SvImJ_P0074598 Sfswap protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074599.1 MGP_129S1SvImJ_G0030125.1 mouse_genomes_project 5 133612679 133613334 + Sfswap protein_coding TEC MGP_129S1SvImJ_T0074600.1 MGP_129S1SvImJ_G0030125.1 mouse_genomes_project 5 133613444 133614420 + Sfswap protein_coding processed_transcript MGP_129S1SvImJ_T0074601.1 MGP_129S1SvImJ_G0030125.1 mouse_genomes_project 5 133614259 133615173 + Sfswap protein_coding retained_intron MGP_129S1SvImJ_T0074602.1 MGP_129S1SvImJ_G0030125.1 mouse_genomes_project 5 133614381 133664937 + MGP_129S1SvImJ_P0074602 Sfswap protein_coding unknown_likely_coding MGP_129S1SvImJ_T0074603.1 MGP_129S1SvImJ_G0030125.1 mouse_genomes_project 5 133614626 133623407 + Sfswap protein_coding retained_intron MGP_129S1SvImJ_T0074604.1 MGP_129S1SvImJ_G0030125.1 mouse_genomes_project 5 133651667 133661037 + MGP_129S1SvImJ_P0074604 Sfswap protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074605.1 MGP_129S1SvImJ_G0030125.1 mouse_genomes_project 5 133659115 133681526 + Sfswap protein_coding retained_intron MGP_129S1SvImJ_T0074606.1 MGP_129S1SvImJ_G0030125.1 mouse_genomes_project 5 133660952 133669655 + Sfswap protein_coding processed_transcript MGP_129S1SvImJ_T0074607.1 MGP_129S1SvImJ_G0030125.1 mouse_genomes_project 5 133670314 133681529 + Sfswap protein_coding retained_intron MGP_129S1SvImJ_T0074608.1 MGP_129S1SvImJ_G0030125.1 mouse_genomes_project 5 133670655 133680157 + Sfswap protein_coding retained_intron MGP_129S1SvImJ_T0074609.1 MGP_129S1SvImJ_G0030125.1 mouse_genomes_project 5 133680862 133681529 + Sfswap protein_coding retained_intron MGP_129S1SvImJ_T0001487.1 MGP_129S1SvImJ_G0001408.1 mouse_genomes_project 5 16643121 16646240 - TEC TEC MGP_129S1SvImJ_T0072399.1 MGP_129S1SvImJ_G0029678.1 mouse_genomes_project 5 87928430 87963826 - MGP_129S1SvImJ_P0072399 Ugt2b36 protein_coding protein_coding MGP_129S1SvImJ_T0072400.1 MGP_129S1SvImJ_G0029678.1 mouse_genomes_project 5 87928941 87963819 - MGP_129S1SvImJ_P0072400 Ugt2b36 protein_coding protein_coding MGP_129S1SvImJ_T0072401.1 MGP_129S1SvImJ_G0029678.1 mouse_genomes_project 5 87928944 87962428 - Ugt2b36 protein_coding retained_intron MGP_129S1SvImJ_T0072402.1 MGP_129S1SvImJ_G0029678.1 mouse_genomes_project 5 87944295 87963817 - MGP_129S1SvImJ_P0072402 Ugt2b36 protein_coding protein_coding MGP_129S1SvImJ_T0008202.1 MGP_129S1SvImJ_G0006686.1 mouse_genomes_project 5 85178790 85182627 + Gm43532 lincRNA lincRNA MGP_129S1SvImJ_T0001666.1 MGP_129S1SvImJ_G0001582.1 mouse_genomes_project 5 65653743 65654644 + TEC TEC MGP_129S1SvImJ_T0073935.1 MGP_129S1SvImJ_G0030017.1 mouse_genomes_project 5 124272605 124353824 + MGP_129S1SvImJ_P0073935 protein_coding protein_coding MGP_129S1SvImJ_T0071482.1 MGP_129S1SvImJ_G0029517.1 mouse_genomes_project 5 40201780 40288394 - MGP_129S1SvImJ_P0071482 Rab28 protein_coding protein_coding MGP_129S1SvImJ_T0071483.1 MGP_129S1SvImJ_G0029517.1 mouse_genomes_project 5 40201780 40288427 - MGP_129S1SvImJ_P0071483 Rab28 protein_coding protein_coding MGP_129S1SvImJ_T0071484.1 MGP_129S1SvImJ_G0029517.1 mouse_genomes_project 5 40201781 40288430 - MGP_129S1SvImJ_P0071484 Rab28 protein_coding protein_coding MGP_129S1SvImJ_T0071485.1 MGP_129S1SvImJ_G0029517.1 mouse_genomes_project 5 40202537 40204307 - Rab28 protein_coding retained_intron MGP_129S1SvImJ_T0071486.1 MGP_129S1SvImJ_G0029517.1 mouse_genomes_project 5 40203031 40205922 - Rab28 protein_coding retained_intron MGP_129S1SvImJ_T0001731.1 MGP_129S1SvImJ_G0001646.1 mouse_genomes_project 5 91469119 91471762 + TEC TEC MGP_129S1SvImJ_T0001557.1 MGP_129S1SvImJ_G0001475.1 mouse_genomes_project 5 43168524 43170671 - TEC TEC MGP_129S1SvImJ_T0004801.1 MGP_129S1SvImJ_G0004145.1 mouse_genomes_project 5 116529225 116529741 + Gm17122 antisense antisense MGP_129S1SvImJ_T0075633.1 MGP_129S1SvImJ_G0030321.1 mouse_genomes_project 5 148297050 148425237 - MGP_129S1SvImJ_P0075633 Rnf216 protein_coding protein_coding MGP_129S1SvImJ_T0075634.1 MGP_129S1SvImJ_G0030321.1 mouse_genomes_project 5 148297979 148425223 - MGP_129S1SvImJ_P0075634 Rnf216 protein_coding protein_coding MGP_129S1SvImJ_T0075635.1 MGP_129S1SvImJ_G0030321.1 mouse_genomes_project 5 148298776 148409630 - MGP_129S1SvImJ_P0075635 Rnf216 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075636.1 MGP_129S1SvImJ_G0030321.1 mouse_genomes_project 5 148298808 148409630 - MGP_129S1SvImJ_P0075636 Rnf216 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075637.1 MGP_129S1SvImJ_G0030321.1 mouse_genomes_project 5 148319468 148320870 - Rnf216 protein_coding retained_intron MGP_129S1SvImJ_T0075638.1 MGP_129S1SvImJ_G0030321.1 mouse_genomes_project 5 148375060 148425223 - Rnf216 protein_coding retained_intron MGP_129S1SvImJ_T0075639.1 MGP_129S1SvImJ_G0030321.1 mouse_genomes_project 5 148390896 148398962 - Rnf216 protein_coding retained_intron MGP_129S1SvImJ_T0075640.1 MGP_129S1SvImJ_G0030321.1 mouse_genomes_project 5 148401407 148425223 - Rnf216 protein_coding processed_transcript MGP_129S1SvImJ_T0075641.1 MGP_129S1SvImJ_G0030321.1 mouse_genomes_project 5 148401596 148425225 - Rnf216 protein_coding processed_transcript MGP_129S1SvImJ_T0015106.1 MGP_129S1SvImJ_G0013195.1 mouse_genomes_project 5 103069062 103069861 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008104.1 MGP_129S1SvImJ_G0006612.1 mouse_genomes_project 5 33650626 33659951 - E130018O15Rik lincRNA lincRNA MGP_129S1SvImJ_T0101193.1 MGP_129S1SvImJ_G0039260.1 mouse_genomes_project 5 63717032 63717166 + Gm22559 snoRNA snoRNA MGP_129S1SvImJ_T0001834.1 MGP_129S1SvImJ_G0001749.1 mouse_genomes_project 5 126429415 126437219 + TEC TEC MGP_129S1SvImJ_T0008156.1 MGP_129S1SvImJ_G0006652.1 mouse_genomes_project 5 63969187 63972631 + Gm43837 lincRNA lincRNA MGP_129S1SvImJ_T0014992.1 MGP_129S1SvImJ_G0013081.1 mouse_genomes_project 5 49391076 49391818 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004841.1 MGP_129S1SvImJ_G0004174.1 mouse_genomes_project 5 126668083 126678490 + A930024E05Rik antisense antisense MGP_129S1SvImJ_T0101216.1 MGP_129S1SvImJ_G0039283.1 mouse_genomes_project 5 121431971 121432103 + Gm25076 snoRNA snoRNA MGP_129S1SvImJ_T0014976.1 MGP_129S1SvImJ_G0013065.1 mouse_genomes_project 5 40004706 40005175 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072054.1 MGP_129S1SvImJ_G0029614.1 mouse_genomes_project 5 72540863 72581595 - MGP_129S1SvImJ_P0072054 Cnga1 protein_coding protein_coding MGP_129S1SvImJ_T0072055.1 MGP_129S1SvImJ_G0029614.1 mouse_genomes_project 5 72540863 72557471 - MGP_129S1SvImJ_P0072055 Cnga1 protein_coding protein_coding MGP_129S1SvImJ_T0072056.1 MGP_129S1SvImJ_G0029614.1 mouse_genomes_project 5 72541282 72576689 - MGP_129S1SvImJ_P0072056 Cnga1 protein_coding protein_coding MGP_129S1SvImJ_T0072057.1 MGP_129S1SvImJ_G0029614.1 mouse_genomes_project 5 72553450 72576694 - MGP_129S1SvImJ_P0072057 Cnga1 protein_coding protein_coding MGP_129S1SvImJ_T0072058.1 MGP_129S1SvImJ_G0029614.1 mouse_genomes_project 5 72557345 72569922 - MGP_129S1SvImJ_P0072058 Cnga1 protein_coding protein_coding MGP_129S1SvImJ_T0072059.1 MGP_129S1SvImJ_G0029614.1 mouse_genomes_project 5 72581129 72583115 - Cnga1 protein_coding retained_intron MGP_129S1SvImJ_T0070029.1 MGP_129S1SvImJ_G0029267.1 mouse_genomes_project 5 906280 931172 - MGP_129S1SvImJ_P0070029 Cyp51 protein_coding protein_coding MGP_129S1SvImJ_T0070030.1 MGP_129S1SvImJ_G0029267.1 mouse_genomes_project 5 908414 930769 - Cyp51 protein_coding processed_transcript MGP_129S1SvImJ_T0070031.1 MGP_129S1SvImJ_G0029267.1 mouse_genomes_project 5 925701 929807 - Cyp51 protein_coding retained_intron MGP_129S1SvImJ_T0070032.1 MGP_129S1SvImJ_G0029267.1 mouse_genomes_project 5 927474 930847 - Cyp51 protein_coding retained_intron MGP_129S1SvImJ_T0071930.1 MGP_129S1SvImJ_G0029591.1 mouse_genomes_project 5 66492876 66739330 + Limch1 protein_coding retained_intron MGP_129S1SvImJ_T0071931.1 MGP_129S1SvImJ_G0029591.1 mouse_genomes_project 5 66492916 66495441 + Limch1 protein_coding retained_intron MGP_129S1SvImJ_T0071932.1 MGP_129S1SvImJ_G0029591.1 mouse_genomes_project 5 66492932 66822259 + MGP_129S1SvImJ_P0071932 Limch1 protein_coding protein_coding MGP_129S1SvImJ_T0071933.1 MGP_129S1SvImJ_G0029591.1 mouse_genomes_project 5 66492938 66717062 + MGP_129S1SvImJ_P0071933 Limch1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071934.1 MGP_129S1SvImJ_G0029591.1 mouse_genomes_project 5 66492959 66823348 + MGP_129S1SvImJ_P0071934 Limch1 protein_coding protein_coding MGP_129S1SvImJ_T0071935.1 MGP_129S1SvImJ_G0029591.1 mouse_genomes_project 5 66656093 66733821 + MGP_129S1SvImJ_P0071935 Limch1 protein_coding protein_coding MGP_129S1SvImJ_T0071936.1 MGP_129S1SvImJ_G0029591.1 mouse_genomes_project 5 66732672 66820876 + Limch1 protein_coding processed_transcript MGP_129S1SvImJ_T0071937.1 MGP_129S1SvImJ_G0029591.1 mouse_genomes_project 5 66733083 66823339 + MGP_129S1SvImJ_P0071937 Limch1 protein_coding protein_coding MGP_129S1SvImJ_T0071938.1 MGP_129S1SvImJ_G0029591.1 mouse_genomes_project 5 66733232 66799392 + Limch1 protein_coding retained_intron MGP_129S1SvImJ_T0071939.1 MGP_129S1SvImJ_G0029591.1 mouse_genomes_project 5 66733244 66764436 + MGP_129S1SvImJ_P0071939 Limch1 protein_coding protein_coding MGP_129S1SvImJ_T0071940.1 MGP_129S1SvImJ_G0029591.1 mouse_genomes_project 5 66733317 66739583 + Limch1 protein_coding retained_intron MGP_129S1SvImJ_T0071941.1 MGP_129S1SvImJ_G0029591.1 mouse_genomes_project 5 66733628 66764466 + MGP_129S1SvImJ_P0071941 Limch1 protein_coding protein_coding MGP_129S1SvImJ_T0071942.1 MGP_129S1SvImJ_G0029591.1 mouse_genomes_project 5 66741685 66764912 + Limch1 protein_coding processed_transcript MGP_129S1SvImJ_T0071943.1 MGP_129S1SvImJ_G0029591.1 mouse_genomes_project 5 66762770 66765017 + Limch1 protein_coding retained_intron MGP_129S1SvImJ_T0071944.1 MGP_129S1SvImJ_G0029591.1 mouse_genomes_project 5 66810523 66820828 + Limch1 protein_coding processed_transcript MGP_129S1SvImJ_T0071945.1 MGP_129S1SvImJ_G0029591.1 mouse_genomes_project 5 66810578 66820823 + MGP_129S1SvImJ_P0071945 Limch1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070672.1 MGP_129S1SvImJ_G0029390.1 mouse_genomes_project 5 28406286 28420990 + MGP_129S1SvImJ_P0070672 1700001C02Rik protein_coding protein_coding MGP_129S1SvImJ_T0070673.1 MGP_129S1SvImJ_G0029390.1 mouse_genomes_project 5 28406294 28424125 + MGP_129S1SvImJ_P0070673 1700001C02Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070674.1 MGP_129S1SvImJ_G0029390.1 mouse_genomes_project 5 28406298 28424169 + MGP_129S1SvImJ_P0070674 1700001C02Rik protein_coding protein_coding MGP_129S1SvImJ_T0070675.1 MGP_129S1SvImJ_G0029390.1 mouse_genomes_project 5 28406323 28424148 + MGP_129S1SvImJ_P0070675 1700001C02Rik protein_coding protein_coding MGP_129S1SvImJ_T0072383.1 MGP_129S1SvImJ_G0029672.1 mouse_genomes_project 5 87507893 87528292 - MGP_129S1SvImJ_P0072383 Tmprss11b protein_coding protein_coding MGP_129S1SvImJ_T0010715.1 MGP_129S1SvImJ_G0008831.1 mouse_genomes_project 5 93660722 93660821 + Mir6415 miRNA miRNA MGP_129S1SvImJ_T0070989.1 MGP_129S1SvImJ_G0029438.1 mouse_genomes_project 5 30925516 30992617 - MGP_129S1SvImJ_P0070989 Prr14l protein_coding protein_coding MGP_129S1SvImJ_T0070990.1 MGP_129S1SvImJ_G0029438.1 mouse_genomes_project 5 30929333 30931799 - Prr14l protein_coding retained_intron MGP_129S1SvImJ_T0001903.1 MGP_129S1SvImJ_G0001816.1 mouse_genomes_project 5 139778761 139779565 + TEC TEC MGP_129S1SvImJ_T0014963.1 MGP_129S1SvImJ_G0013052.1 mouse_genomes_project 5 32262057 32262514 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073692.1 MGP_129S1SvImJ_G0029970.1 mouse_genomes_project 5 118351530 118362909 + MGP_129S1SvImJ_P0073692 Pla2g1b protein_coding protein_coding MGP_129S1SvImJ_T0073693.1 MGP_129S1SvImJ_G0029970.1 mouse_genomes_project 5 118351534 118362897 + Pla2g1b protein_coding processed_transcript MGP_129S1SvImJ_T0073694.1 MGP_129S1SvImJ_G0029970.1 mouse_genomes_project 5 118351534 118362923 + MGP_129S1SvImJ_P0073694 Pla2g1b protein_coding protein_coding MGP_129S1SvImJ_T0073695.1 MGP_129S1SvImJ_G0029970.1 mouse_genomes_project 5 118351540 118362762 + MGP_129S1SvImJ_P0073695 Pla2g1b protein_coding protein_coding MGP_129S1SvImJ_T0073696.1 MGP_129S1SvImJ_G0029970.1 mouse_genomes_project 5 118351540 118358257 + MGP_129S1SvImJ_P0073696 Pla2g1b protein_coding protein_coding MGP_129S1SvImJ_T0072694.1 MGP_129S1SvImJ_G0029757.1 mouse_genomes_project 5 94255079 94258981 - MGP_129S1SvImJ_P0072694 Sowahb protein_coding protein_coding MGP_129S1SvImJ_T0008435.1 MGP_129S1SvImJ_G0006844.1 mouse_genomes_project 5 145636796 145637703 - Gm42808 lincRNA lincRNA MGP_129S1SvImJ_T0008055.1 MGP_129S1SvImJ_G0006580.1 mouse_genomes_project 5 10987793 11045820 - Gm43716 lincRNA lincRNA MGP_129S1SvImJ_T0010749.1 MGP_129S1SvImJ_G0008865.1 mouse_genomes_project 5 142960928 142961016 - Mir93 miRNA miRNA MGP_129S1SvImJ_T0008273.1 MGP_129S1SvImJ_G0006742.1 mouse_genomes_project 5 110466883 110470596 + Gm43082 lincRNA lincRNA MGP_129S1SvImJ_T0072944.1 MGP_129S1SvImJ_G0029810.1 mouse_genomes_project 5 105852227 105861787 + MGP_129S1SvImJ_P0072944 Dspp protein_coding protein_coding MGP_129S1SvImJ_T0072306.1 MGP_129S1SvImJ_G0029659.1 mouse_genomes_project 5 77627355 77698211 - MGP_129S1SvImJ_P0072306 Igfbp7 protein_coding protein_coding MGP_129S1SvImJ_T0072307.1 MGP_129S1SvImJ_G0029659.1 mouse_genomes_project 5 77627365 77698237 - MGP_129S1SvImJ_P0072307 Igfbp7 protein_coding protein_coding MGP_129S1SvImJ_T0071140.1 MGP_129S1SvImJ_G0029463.1 mouse_genomes_project 5 32558505 32579343 + MGP_129S1SvImJ_P0071140 Rnf4 protein_coding protein_coding MGP_129S1SvImJ_T0071141.1 MGP_129S1SvImJ_G0029463.1 mouse_genomes_project 5 32558544 32576431 + Rnf4 protein_coding retained_intron MGP_129S1SvImJ_T0071142.1 MGP_129S1SvImJ_G0029463.1 mouse_genomes_project 5 32558596 32579340 + MGP_129S1SvImJ_P0071142 Rnf4 protein_coding protein_coding MGP_129S1SvImJ_T0071143.1 MGP_129S1SvImJ_G0029463.1 mouse_genomes_project 5 32558606 32574866 + Rnf4 protein_coding processed_transcript MGP_129S1SvImJ_T0071144.1 MGP_129S1SvImJ_G0029463.1 mouse_genomes_project 5 32558633 32571967 + Rnf4 protein_coding retained_intron MGP_129S1SvImJ_T0071145.1 MGP_129S1SvImJ_G0029463.1 mouse_genomes_project 5 32558635 32565949 + Rnf4 protein_coding processed_transcript MGP_129S1SvImJ_T0071146.1 MGP_129S1SvImJ_G0029463.1 mouse_genomes_project 5 32558640 32572259 + Rnf4 protein_coding retained_intron MGP_129S1SvImJ_T0071147.1 MGP_129S1SvImJ_G0029463.1 mouse_genomes_project 5 32558662 32574701 + Rnf4 protein_coding retained_intron MGP_129S1SvImJ_T0071148.1 MGP_129S1SvImJ_G0029463.1 mouse_genomes_project 5 32558901 32574863 + MGP_129S1SvImJ_P0071148 Rnf4 protein_coding protein_coding MGP_129S1SvImJ_T0071149.1 MGP_129S1SvImJ_G0029463.1 mouse_genomes_project 5 32559148 32579328 + MGP_129S1SvImJ_P0071149 Rnf4 protein_coding protein_coding MGP_129S1SvImJ_T0071150.1 MGP_129S1SvImJ_G0029463.1 mouse_genomes_project 5 32559535 32565985 + Rnf4 protein_coding processed_transcript MGP_129S1SvImJ_T0071151.1 MGP_129S1SvImJ_G0029463.1 mouse_genomes_project 5 32577019 32581533 + Rnf4 protein_coding retained_intron MGP_129S1SvImJ_T0001564.1 MGP_129S1SvImJ_G0001482.1 mouse_genomes_project 5 44240444 44242484 + TEC TEC MGP_129S1SvImJ_T0010692.1 MGP_129S1SvImJ_G0008808.1 mouse_genomes_project 5 32820194 32820257 + Mir7036b miRNA miRNA MGP_129S1SvImJ_T0076041.1 MGP_129S1SvImJ_G0030406.1 mouse_genomes_project 5 155537683 155634053 + MGP_129S1SvImJ_P0076041 B3glct protein_coding protein_coding MGP_129S1SvImJ_T0076042.1 MGP_129S1SvImJ_G0030406.1 mouse_genomes_project 5 155610944 155622584 + B3glct protein_coding processed_transcript MGP_129S1SvImJ_T0076043.1 MGP_129S1SvImJ_G0030406.1 mouse_genomes_project 5 155625380 155632063 + B3glct protein_coding retained_intron MGP_129S1SvImJ_T0075070.1 MGP_129S1SvImJ_G0030207.1 mouse_genomes_project 5 141366072 141375985 + MGP_129S1SvImJ_P0075070 Myl10 protein_coding protein_coding MGP_129S1SvImJ_T0075071.1 MGP_129S1SvImJ_G0030207.1 mouse_genomes_project 5 141366104 141375883 + MGP_129S1SvImJ_P0075071 Myl10 protein_coding protein_coding MGP_129S1SvImJ_T0075072.1 MGP_129S1SvImJ_G0030207.1 mouse_genomes_project 5 141366602 141375985 + MGP_129S1SvImJ_P0075072 Myl10 protein_coding protein_coding MGP_129S1SvImJ_T0075073.1 MGP_129S1SvImJ_G0030207.1 mouse_genomes_project 5 141367103 141375985 + MGP_129S1SvImJ_P0075073 Myl10 protein_coding protein_coding MGP_129S1SvImJ_T0075074.1 MGP_129S1SvImJ_G0030207.1 mouse_genomes_project 5 141372669 141375985 + Myl10 protein_coding retained_intron MGP_129S1SvImJ_T0075075.1 MGP_129S1SvImJ_G0030207.1 mouse_genomes_project 5 141372720 141375983 + Myl10 protein_coding retained_intron MGP_129S1SvImJ_T0001852.1 MGP_129S1SvImJ_G0001766.1 mouse_genomes_project 5 130944219 130947600 + TEC TEC MGP_129S1SvImJ_T0008236.1 MGP_129S1SvImJ_G0006716.1 mouse_genomes_project 5 101650425 101654539 + Gm9932 lincRNA lincRNA MGP_129S1SvImJ_T0001503.1 MGP_129S1SvImJ_G0001423.1 mouse_genomes_project 5 26075681 26076046 - TEC TEC MGP_129S1SvImJ_T0001868.1 MGP_129S1SvImJ_G0001782.1 mouse_genomes_project 5 135103771 135105847 - TEC TEC MGP_129S1SvImJ_T0015192.1 MGP_129S1SvImJ_G0013281.1 mouse_genomes_project 5 142183498 142185045 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0071727.1 MGP_129S1SvImJ_G0029558.1 mouse_genomes_project 5 57009290 57447580 + MGP_129S1SvImJ_P0071727 Pcdh7 protein_coding protein_coding MGP_129S1SvImJ_T0071728.1 MGP_129S1SvImJ_G0029558.1 mouse_genomes_project 5 57009343 57020781 + MGP_129S1SvImJ_P0071728 Pcdh7 protein_coding protein_coding MGP_129S1SvImJ_T0071729.1 MGP_129S1SvImJ_G0029558.1 mouse_genomes_project 5 57010420 57443701 + MGP_129S1SvImJ_P0071729 Pcdh7 protein_coding protein_coding MGP_129S1SvImJ_T0071730.1 MGP_129S1SvImJ_G0029558.1 mouse_genomes_project 5 57011446 57222329 + MGP_129S1SvImJ_P0071730 Pcdh7 protein_coding protein_coding MGP_129S1SvImJ_T0071731.1 MGP_129S1SvImJ_G0029558.1 mouse_genomes_project 5 57012485 57444147 + MGP_129S1SvImJ_P0071731 Pcdh7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071732.1 MGP_129S1SvImJ_G0029558.1 mouse_genomes_project 5 57013236 57218714 + MGP_129S1SvImJ_P0071732 Pcdh7 protein_coding protein_coding MGP_129S1SvImJ_T0071733.1 MGP_129S1SvImJ_G0029558.1 mouse_genomes_project 5 57013532 57443804 + MGP_129S1SvImJ_P0071733 Pcdh7 protein_coding protein_coding MGP_129S1SvImJ_T0001873.1 MGP_129S1SvImJ_G0001787.1 mouse_genomes_project 5 135866773 135867473 - TEC TEC MGP_129S1SvImJ_T0102580.1 MGP_129S1SvImJ_G0040413.1 mouse_genomes_project 5 142853039 142854554 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0004719.1 MGP_129S1SvImJ_G0004087.1 mouse_genomes_project 5 65866552 65890256 + Gm26725 antisense antisense MGP_129S1SvImJ_T0010704.1 MGP_129S1SvImJ_G0008820.1 mouse_genomes_project 5 65691666 65691740 + Gm25952 miRNA miRNA MGP_129S1SvImJ_T0004745.1 MGP_129S1SvImJ_G0004109.1 mouse_genomes_project 5 88800333 88803863 - Gm42794 antisense antisense MGP_129S1SvImJ_T0070797.1 MGP_129S1SvImJ_G0029411.1 mouse_genomes_project 5 29123643 29124410 - MGP_129S1SvImJ_P0070797 Ucn protein_coding protein_coding MGP_129S1SvImJ_T0070798.1 MGP_129S1SvImJ_G0029411.1 mouse_genomes_project 5 29123643 29124410 - MGP_129S1SvImJ_P0070798 Ucn protein_coding protein_coding MGP_129S1SvImJ_T0101188.1 MGP_129S1SvImJ_G0039255.1 mouse_genomes_project 5 57747117 57747251 + Gm22536 snoRNA snoRNA MGP_129S1SvImJ_T0004884.1 MGP_129S1SvImJ_G0004205.1 mouse_genomes_project 5 142389073 142391471 + Gm36266 antisense antisense MGP_129S1SvImJ_T0008245.1 MGP_129S1SvImJ_G0006721.1 mouse_genomes_project 5 103269812 103276983 - Gm43271 lincRNA lincRNA MGP_129S1SvImJ_T0008380.1 MGP_129S1SvImJ_G0006809.1 mouse_genomes_project 5 129840059 129844014 - Gm42945 lincRNA lincRNA MGP_129S1SvImJ_T0008381.1 MGP_129S1SvImJ_G0006809.1 mouse_genomes_project 5 129840073 129847498 - Gm42945 lincRNA lincRNA MGP_129S1SvImJ_T0001489.1 MGP_129S1SvImJ_G0001410.1 mouse_genomes_project 5 18567052 18568385 + TEC TEC MGP_129S1SvImJ_T0075421.1 MGP_129S1SvImJ_G0030276.1 mouse_genomes_project 5 144098533 144137513 + MGP_129S1SvImJ_P0075421 Dnaaf5 protein_coding protein_coding MGP_129S1SvImJ_T0075422.1 MGP_129S1SvImJ_G0030276.1 mouse_genomes_project 5 144118247 144129001 + Dnaaf5 protein_coding processed_transcript MGP_129S1SvImJ_T0072766.1 MGP_129S1SvImJ_G0029776.1 mouse_genomes_project 5 100237080 100256422 + MGP_129S1SvImJ_P0072766 Bmp3 protein_coding protein_coding MGP_129S1SvImJ_T0072767.1 MGP_129S1SvImJ_G0029776.1 mouse_genomes_project 5 100237104 100267054 + MGP_129S1SvImJ_P0072767 Bmp3 protein_coding protein_coding MGP_129S1SvImJ_T0072768.1 MGP_129S1SvImJ_G0029776.1 mouse_genomes_project 5 100237116 100267054 + MGP_129S1SvImJ_P0072768 Bmp3 protein_coding protein_coding MGP_129S1SvImJ_T0008244.1 MGP_129S1SvImJ_G0006720.1 mouse_genomes_project 5 103170599 103173660 + Gm20484 lincRNA lincRNA MGP_129S1SvImJ_T0075538.1 MGP_129S1SvImJ_G0030302.1 mouse_genomes_project 5 145712190 145721922 + MGP_129S1SvImJ_P0075538 Lfng protein_coding protein_coding MGP_129S1SvImJ_T0075539.1 MGP_129S1SvImJ_G0030302.1 mouse_genomes_project 5 145717885 145719709 + Lfng protein_coding processed_transcript MGP_129S1SvImJ_T0075540.1 MGP_129S1SvImJ_G0030302.1 mouse_genomes_project 5 145718061 145721051 + Lfng protein_coding retained_intron MGP_129S1SvImJ_T0001526.1 MGP_129S1SvImJ_G0001444.1 mouse_genomes_project 5 32707052 32710584 + TEC TEC MGP_129S1SvImJ_T0015214.1 MGP_129S1SvImJ_G0013303.1 mouse_genomes_project 5 148471314 148471696 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001772.1 MGP_129S1SvImJ_G0001687.1 mouse_genomes_project 5 110412624 110414005 - TEC TEC MGP_129S1SvImJ_T0075664.1 MGP_129S1SvImJ_G0030329.1 mouse_genomes_project 5 148637930 148654891 - MGP_129S1SvImJ_P0075664 Zdhhc4 protein_coding protein_coding MGP_129S1SvImJ_T0075665.1 MGP_129S1SvImJ_G0030329.1 mouse_genomes_project 5 148637931 148654855 - MGP_129S1SvImJ_P0075665 Zdhhc4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075666.1 MGP_129S1SvImJ_G0030329.1 mouse_genomes_project 5 148637938 148647795 - MGP_129S1SvImJ_P0075666 Zdhhc4 protein_coding protein_coding MGP_129S1SvImJ_T0075667.1 MGP_129S1SvImJ_G0030329.1 mouse_genomes_project 5 148641826 148654846 - Zdhhc4 protein_coding processed_transcript MGP_129S1SvImJ_T0075668.1 MGP_129S1SvImJ_G0030329.1 mouse_genomes_project 5 148641881 148654858 - MGP_129S1SvImJ_P0075668 Zdhhc4 protein_coding protein_coding MGP_129S1SvImJ_T0075669.1 MGP_129S1SvImJ_G0030329.1 mouse_genomes_project 5 148641887 148654849 - MGP_129S1SvImJ_P0075669 Zdhhc4 protein_coding protein_coding MGP_129S1SvImJ_T0075670.1 MGP_129S1SvImJ_G0030329.1 mouse_genomes_project 5 148645573 148654864 - MGP_129S1SvImJ_P0075670 Zdhhc4 protein_coding protein_coding MGP_129S1SvImJ_T0075671.1 MGP_129S1SvImJ_G0030329.1 mouse_genomes_project 5 148645660 148654864 - Zdhhc4 protein_coding processed_transcript MGP_129S1SvImJ_T0075672.1 MGP_129S1SvImJ_G0030329.1 mouse_genomes_project 5 148645675 148654863 - MGP_129S1SvImJ_P0075672 Zdhhc4 protein_coding protein_coding MGP_129S1SvImJ_T0075673.1 MGP_129S1SvImJ_G0030329.1 mouse_genomes_project 5 148645773 148654204 - Zdhhc4 protein_coding retained_intron MGP_129S1SvImJ_T0075674.1 MGP_129S1SvImJ_G0030329.1 mouse_genomes_project 5 148647433 148654824 - Zdhhc4 protein_coding processed_transcript MGP_129S1SvImJ_T0075675.1 MGP_129S1SvImJ_G0030329.1 mouse_genomes_project 5 148647496 148654827 - Zdhhc4 protein_coding processed_transcript MGP_129S1SvImJ_T0075676.1 MGP_129S1SvImJ_G0030329.1 mouse_genomes_project 5 148653929 148654837 - Zdhhc4 protein_coding processed_transcript MGP_129S1SvImJ_T0071845.1 MGP_129S1SvImJ_G0029582.1 mouse_genomes_project 5 65264960 65373341 - MGP_129S1SvImJ_P0071845 Pds5a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0071846.1 MGP_129S1SvImJ_G0029582.1 mouse_genomes_project 5 65265973 65386904 - MGP_129S1SvImJ_P0071846 Pds5a protein_coding protein_coding MGP_129S1SvImJ_T0071847.1 MGP_129S1SvImJ_G0029582.1 mouse_genomes_project 5 65265975 65274984 - Pds5a protein_coding retained_intron MGP_129S1SvImJ_T0071848.1 MGP_129S1SvImJ_G0029582.1 mouse_genomes_project 5 65268022 65283815 - MGP_129S1SvImJ_P0071848 Pds5a protein_coding protein_coding MGP_129S1SvImJ_T0071849.1 MGP_129S1SvImJ_G0029582.1 mouse_genomes_project 5 65278470 65373386 - MGP_129S1SvImJ_P0071849 Pds5a protein_coding protein_coding MGP_129S1SvImJ_T0071850.1 MGP_129S1SvImJ_G0029582.1 mouse_genomes_project 5 65278626 65285763 - Pds5a protein_coding retained_intron MGP_129S1SvImJ_T0071851.1 MGP_129S1SvImJ_G0029582.1 mouse_genomes_project 5 65286084 65319580 - Pds5a protein_coding retained_intron MGP_129S1SvImJ_T0071852.1 MGP_129S1SvImJ_G0029582.1 mouse_genomes_project 5 65286099 65297753 - Pds5a protein_coding retained_intron MGP_129S1SvImJ_T0071853.1 MGP_129S1SvImJ_G0029582.1 mouse_genomes_project 5 65286559 65298771 - Pds5a protein_coding retained_intron MGP_129S1SvImJ_T0071854.1 MGP_129S1SvImJ_G0029582.1 mouse_genomes_project 5 65287013 65299202 - Pds5a protein_coding retained_intron MGP_129S1SvImJ_T0071855.1 MGP_129S1SvImJ_G0029582.1 mouse_genomes_project 5 65306894 65308080 - Pds5a protein_coding retained_intron MGP_129S1SvImJ_T0071856.1 MGP_129S1SvImJ_G0029582.1 mouse_genomes_project 5 65311244 65314265 - Pds5a protein_coding retained_intron MGP_129S1SvImJ_T0071857.1 MGP_129S1SvImJ_G0029582.1 mouse_genomes_project 5 65315122 65387009 - Pds5a protein_coding retained_intron MGP_129S1SvImJ_T0071858.1 MGP_129S1SvImJ_G0029582.1 mouse_genomes_project 5 65323237 65324387 - Pds5a protein_coding retained_intron MGP_129S1SvImJ_T0071859.1 MGP_129S1SvImJ_G0029582.1 mouse_genomes_project 5 65337508 65372362 - Pds5a protein_coding retained_intron MGP_129S1SvImJ_T0014860.1 MGP_129S1SvImJ_G0012949.1 mouse_genomes_project 5 231949 232120 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0074942.1 MGP_129S1SvImJ_G0030185.1 mouse_genomes_project 5 140120862 140123975 - MGP_129S1SvImJ_P0074942 Ccl24 protein_coding protein_coding MGP_129S1SvImJ_T0074943.1 MGP_129S1SvImJ_G0030185.1 mouse_genomes_project 5 140121505 140123975 - MGP_129S1SvImJ_P0074943 Ccl24 protein_coding protein_coding MGP_129S1SvImJ_T0014859.1 MGP_129S1SvImJ_G0012948.1 mouse_genomes_project 5 231943 232124 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015162.1 MGP_129S1SvImJ_G0013251.1 mouse_genomes_project 5 119653495 119657940 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001890.1 MGP_129S1SvImJ_G0001804.1 mouse_genomes_project 5 136754375 136756773 - TEC TEC MGP_129S1SvImJ_T0001874.1 MGP_129S1SvImJ_G0001788.1 mouse_genomes_project 5 135884030 135886890 - TEC TEC MGP_129S1SvImJ_T0074451.1 MGP_129S1SvImJ_G0030097.1 mouse_genomes_project 5 128311286 128321083 + MGP_129S1SvImJ_P0074451 Snrnp35 protein_coding protein_coding MGP_129S1SvImJ_T0074452.1 MGP_129S1SvImJ_G0030097.1 mouse_genomes_project 5 128311354 128320449 + MGP_129S1SvImJ_P0074452 Snrnp35 protein_coding protein_coding MGP_129S1SvImJ_T0074453.1 MGP_129S1SvImJ_G0030097.1 mouse_genomes_project 5 128311610 128321066 + MGP_129S1SvImJ_P0074453 Snrnp35 protein_coding protein_coding MGP_129S1SvImJ_T0004859.1 MGP_129S1SvImJ_G0004185.1 mouse_genomes_project 5 128895172 128898691 + Gm42839 antisense antisense MGP_129S1SvImJ_T0073140.1 MGP_129S1SvImJ_G0029857.1 mouse_genomes_project 5 110578099 110607743 + MGP_129S1SvImJ_P0073140 Pcgf3 protein_coding protein_coding MGP_129S1SvImJ_T0073141.1 MGP_129S1SvImJ_G0029857.1 mouse_genomes_project 5 110578099 110625328 + MGP_129S1SvImJ_P0073141 Pcgf3 protein_coding protein_coding MGP_129S1SvImJ_T0073142.1 MGP_129S1SvImJ_G0029857.1 mouse_genomes_project 5 110578180 110605013 + MGP_129S1SvImJ_P0073142 Pcgf3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073143.1 MGP_129S1SvImJ_G0029857.1 mouse_genomes_project 5 110591750 110596375 + Pcgf3 protein_coding retained_intron MGP_129S1SvImJ_T0073144.1 MGP_129S1SvImJ_G0029857.1 mouse_genomes_project 5 110605061 110614645 + Pcgf3 protein_coding retained_intron MGP_129S1SvImJ_T0101717.1 MGP_129S1SvImJ_G0039721.1 mouse_genomes_project 5 44483512 44484389 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0073326.1 MGP_129S1SvImJ_G0029894.1 mouse_genomes_project 5 113308934 113321976 - MGP_129S1SvImJ_P0073326 Hscb protein_coding protein_coding MGP_129S1SvImJ_T0073327.1 MGP_129S1SvImJ_G0029894.1 mouse_genomes_project 5 113308943 113321823 - MGP_129S1SvImJ_P0073327 Hscb protein_coding protein_coding MGP_129S1SvImJ_T0073328.1 MGP_129S1SvImJ_G0029894.1 mouse_genomes_project 5 113308943 113318377 - MGP_129S1SvImJ_P0073328 Hscb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073329.1 MGP_129S1SvImJ_G0029894.1 mouse_genomes_project 5 113308944 113315548 - Hscb protein_coding retained_intron MGP_129S1SvImJ_T0075362.1 MGP_129S1SvImJ_G0030266.1 mouse_genomes_project 5 143114742 143129745 - MGP_129S1SvImJ_P0075362 Gm43720 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071419.1 MGP_129S1SvImJ_G0029507.1 mouse_genomes_project 5 36597039 36613486 - Zbtb49 protein_coding processed_transcript MGP_129S1SvImJ_T0071420.1 MGP_129S1SvImJ_G0029507.1 mouse_genomes_project 5 36607386 36627760 - MGP_129S1SvImJ_P0071420 Zbtb49 protein_coding protein_coding MGP_129S1SvImJ_T0071421.1 MGP_129S1SvImJ_G0029507.1 mouse_genomes_project 5 36607552 36627716 - MGP_129S1SvImJ_P0071421 Zbtb49 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071422.1 MGP_129S1SvImJ_G0029507.1 mouse_genomes_project 5 36607555 36627728 - MGP_129S1SvImJ_P0071422 Zbtb49 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071423.1 MGP_129S1SvImJ_G0029507.1 mouse_genomes_project 5 36607940 36627728 - MGP_129S1SvImJ_P0071423 Zbtb49 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071424.1 MGP_129S1SvImJ_G0029507.1 mouse_genomes_project 5 36607940 36627730 - MGP_129S1SvImJ_P0071424 Zbtb49 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071425.1 MGP_129S1SvImJ_G0029507.1 mouse_genomes_project 5 36610554 36611104 - MGP_129S1SvImJ_P0071425 Zbtb49 protein_coding protein_coding MGP_129S1SvImJ_T0071426.1 MGP_129S1SvImJ_G0029507.1 mouse_genomes_project 5 36611055 36620855 - MGP_129S1SvImJ_P0071426 Zbtb49 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071427.1 MGP_129S1SvImJ_G0029507.1 mouse_genomes_project 5 36611111 36627734 - MGP_129S1SvImJ_P0071427 Zbtb49 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071428.1 MGP_129S1SvImJ_G0029507.1 mouse_genomes_project 5 36619340 36627757 - MGP_129S1SvImJ_P0071428 Zbtb49 protein_coding protein_coding MGP_129S1SvImJ_T0071429.1 MGP_129S1SvImJ_G0029507.1 mouse_genomes_project 5 36622681 36627727 - Zbtb49 protein_coding retained_intron MGP_129S1SvImJ_T0074904.1 MGP_129S1SvImJ_G0030176.1 mouse_genomes_project 5 139669788 139683308 + MGP_129S1SvImJ_P0074904 Bcl7b protein_coding protein_coding MGP_129S1SvImJ_T0074905.1 MGP_129S1SvImJ_G0030176.1 mouse_genomes_project 5 139669894 139674954 + MGP_129S1SvImJ_P0074905 Bcl7b protein_coding protein_coding MGP_129S1SvImJ_T0074906.1 MGP_129S1SvImJ_G0030176.1 mouse_genomes_project 5 139669917 139683284 + MGP_129S1SvImJ_P0074906 Bcl7b protein_coding protein_coding MGP_129S1SvImJ_T0074907.1 MGP_129S1SvImJ_G0030176.1 mouse_genomes_project 5 139669950 139682048 + MGP_129S1SvImJ_P0074907 Bcl7b protein_coding protein_coding MGP_129S1SvImJ_T0074908.1 MGP_129S1SvImJ_G0030176.1 mouse_genomes_project 5 139681034 139682578 + Bcl7b protein_coding retained_intron MGP_129S1SvImJ_T0001588.1 MGP_129S1SvImJ_G0001505.1 mouse_genomes_project 5 47832312 47833140 - TEC TEC MGP_129S1SvImJ_T0072308.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81594702 81979122 + Adgrl3 protein_coding retained_intron MGP_129S1SvImJ_T0072309.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81595839 82394558 + MGP_129S1SvImJ_P0072309 Adgrl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072310.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81596019 82278084 + Adgrl3 protein_coding retained_intron MGP_129S1SvImJ_T0072311.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81596022 82278081 + Adgrl3 protein_coding retained_intron MGP_129S1SvImJ_T0072312.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81596263 81645513 + Adgrl3 protein_coding retained_intron MGP_129S1SvImJ_T0072313.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81596466 82061877 + Adgrl3 protein_coding retained_intron MGP_129S1SvImJ_T0072314.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81596469 82390887 + MGP_129S1SvImJ_P0072314 Adgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0072315.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81596507 82394569 + MGP_129S1SvImJ_P0072315 Adgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0072316.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81596860 82394559 + MGP_129S1SvImJ_P0072316 Adgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0072317.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81597058 81787856 + Adgrl3 protein_coding processed_transcript MGP_129S1SvImJ_T0072318.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81597059 82394558 + Adgrl3 protein_coding processed_transcript MGP_129S1SvImJ_T0072319.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81597077 82160183 + Adgrl3 protein_coding retained_intron MGP_129S1SvImJ_T0072320.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81904903 82393266 + MGP_129S1SvImJ_P0072320 Adgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0072321.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81904904 82393266 + MGP_129S1SvImJ_P0072321 Adgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0072322.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81904904 82393266 + MGP_129S1SvImJ_P0072322 Adgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0072323.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81904904 82393266 + MGP_129S1SvImJ_P0072323 Adgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0072324.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81904904 82393266 + MGP_129S1SvImJ_P0072324 Adgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0072325.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81904904 82393266 + MGP_129S1SvImJ_P0072325 Adgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0072326.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81904904 82393266 + MGP_129S1SvImJ_P0072326 Adgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0072327.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81904904 82393266 + MGP_129S1SvImJ_P0072327 Adgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0072328.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81904904 82393266 + MGP_129S1SvImJ_P0072328 Adgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0072329.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81904912 81941387 + Adgrl3 protein_coding processed_transcript MGP_129S1SvImJ_T0072330.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81904942 82393135 + MGP_129S1SvImJ_P0072330 Adgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0072331.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81904942 82393135 + MGP_129S1SvImJ_P0072331 Adgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0072332.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81904942 82393135 + MGP_129S1SvImJ_P0072332 Adgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0072333.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81904942 82393806 + MGP_129S1SvImJ_P0072333 Adgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0072334.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81904967 82393635 + MGP_129S1SvImJ_P0072334 Adgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0072335.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81905055 82394558 + MGP_129S1SvImJ_P0072335 Adgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0072336.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 81905055 82394558 + MGP_129S1SvImJ_P0072336 Adgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0072337.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 82234005 82277863 + Adgrl3 protein_coding processed_transcript MGP_129S1SvImJ_T0072338.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 82249265 82250614 + Adgrl3 protein_coding retained_intron MGP_129S1SvImJ_T0072339.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 82249624 82394558 + MGP_129S1SvImJ_P0072339 Adgrl3 protein_coding protein_coding MGP_129S1SvImJ_T0072340.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 82315895 82317990 + Adgrl3 protein_coding retained_intron MGP_129S1SvImJ_T0072341.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 82369560 82425686 + Adgrl3 protein_coding processed_transcript MGP_129S1SvImJ_T0072342.1 MGP_129S1SvImJ_G0029660.1 mouse_genomes_project 5 82389447 82391506 + Adgrl3 protein_coding retained_intron MGP_129S1SvImJ_T0071987.1 MGP_129S1SvImJ_G0029599.1 mouse_genomes_project 5 67727590 67764767 + MGP_129S1SvImJ_P0071987 Gm5108 protein_coding protein_coding MGP_129S1SvImJ_T0071988.1 MGP_129S1SvImJ_G0029599.1 mouse_genomes_project 5 67727660 67764697 + Gm5108 protein_coding antisense MGP_129S1SvImJ_T0071989.1 MGP_129S1SvImJ_G0029599.1 mouse_genomes_project 5 67727660 67764702 + Gm5108 protein_coding antisense MGP_129S1SvImJ_T0008155.1 MGP_129S1SvImJ_G0006651.1 mouse_genomes_project 5 63946503 63949385 + Gm43838 lincRNA lincRNA MGP_129S1SvImJ_T0014983.1 MGP_129S1SvImJ_G0013072.1 mouse_genomes_project 5 43064774 43065411 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073906.1 MGP_129S1SvImJ_G0030009.1 mouse_genomes_project 5 123997683 124013537 + MGP_129S1SvImJ_P0073906 Ddx54 protein_coding protein_coding MGP_129S1SvImJ_T0073907.1 MGP_129S1SvImJ_G0030009.1 mouse_genomes_project 5 123998071 124012572 + Ddx54 protein_coding retained_intron MGP_129S1SvImJ_T0073908.1 MGP_129S1SvImJ_G0030009.1 mouse_genomes_project 5 124003848 124006743 + Ddx54 protein_coding retained_intron MGP_129S1SvImJ_T0073909.1 MGP_129S1SvImJ_G0030009.1 mouse_genomes_project 5 124006271 124006742 + Ddx54 protein_coding retained_intron MGP_129S1SvImJ_T0014904.1 MGP_129S1SvImJ_G0012993.1 mouse_genomes_project 5 19175451 19175952 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072201.1 MGP_129S1SvImJ_G0029639.1 mouse_genomes_project 5 76105866 76152652 - MGP_129S1SvImJ_P0072201 Kdr protein_coding protein_coding MGP_129S1SvImJ_T0072202.1 MGP_129S1SvImJ_G0029639.1 mouse_genomes_project 5 76131566 76152652 - Kdr protein_coding retained_intron MGP_129S1SvImJ_T0072203.1 MGP_129S1SvImJ_G0029639.1 mouse_genomes_project 5 76135445 76152652 - Kdr protein_coding retained_intron MGP_129S1SvImJ_T0001803.1 MGP_129S1SvImJ_G0001718.1 mouse_genomes_project 5 119506677 119508013 - TEC TEC MGP_129S1SvImJ_T0099950.1 MGP_129S1SvImJ_G0038017.1 mouse_genomes_project 5 105555919 105556026 + Gm24897 snRNA snRNA MGP_129S1SvImJ_T0004731.1 MGP_129S1SvImJ_G0004097.1 mouse_genomes_project 5 71567141 71587376 - Gm43477 antisense antisense MGP_129S1SvImJ_T0070582.1 MGP_129S1SvImJ_G0029373.1 mouse_genomes_project 5 27102460 27109603 + MGP_129S1SvImJ_P0070582 Rnf32 protein_coding protein_coding MGP_129S1SvImJ_T0070583.1 MGP_129S1SvImJ_G0029373.1 mouse_genomes_project 5 27102461 27135219 + MGP_129S1SvImJ_P0070583 Rnf32 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070584.1 MGP_129S1SvImJ_G0029373.1 mouse_genomes_project 5 27102463 27105215 + MGP_129S1SvImJ_P0070584 Rnf32 protein_coding protein_coding MGP_129S1SvImJ_T0070585.1 MGP_129S1SvImJ_G0029373.1 mouse_genomes_project 5 27102465 27135260 + MGP_129S1SvImJ_P0070585 Rnf32 protein_coding protein_coding MGP_129S1SvImJ_T0070586.1 MGP_129S1SvImJ_G0029373.1 mouse_genomes_project 5 27102471 27109663 + MGP_129S1SvImJ_P0070586 Rnf32 protein_coding protein_coding MGP_129S1SvImJ_T0070587.1 MGP_129S1SvImJ_G0029373.1 mouse_genomes_project 5 27102474 27135262 + MGP_129S1SvImJ_P0070587 Rnf32 protein_coding protein_coding MGP_129S1SvImJ_T0070588.1 MGP_129S1SvImJ_G0029373.1 mouse_genomes_project 5 27102526 27114119 + Rnf32 protein_coding retained_intron MGP_129S1SvImJ_T0070589.1 MGP_129S1SvImJ_G0029373.1 mouse_genomes_project 5 27102552 27104459 + Rnf32 protein_coding processed_transcript MGP_129S1SvImJ_T0070590.1 MGP_129S1SvImJ_G0029373.1 mouse_genomes_project 5 27103055 27109552 + MGP_129S1SvImJ_P0070590 Rnf32 protein_coding protein_coding MGP_129S1SvImJ_T0070591.1 MGP_129S1SvImJ_G0029373.1 mouse_genomes_project 5 27104473 27135029 + MGP_129S1SvImJ_P0070591 Rnf32 protein_coding protein_coding MGP_129S1SvImJ_T0070592.1 MGP_129S1SvImJ_G0029373.1 mouse_genomes_project 5 27105138 27135039 + MGP_129S1SvImJ_P0070592 Rnf32 protein_coding protein_coding MGP_129S1SvImJ_T0070593.1 MGP_129S1SvImJ_G0029373.1 mouse_genomes_project 5 27133523 27138195 + Rnf32 protein_coding retained_intron MGP_129S1SvImJ_T0014995.1 MGP_129S1SvImJ_G0013084.1 mouse_genomes_project 5 51916102 51917283 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004659.1 MGP_129S1SvImJ_G0004039.1 mouse_genomes_project 5 19498212 19543707 + Gm10475 antisense antisense MGP_129S1SvImJ_T0075358.1 MGP_129S1SvImJ_G0030265.1 mouse_genomes_project 5 143114711 143122627 - MGP_129S1SvImJ_P0075358 Gal3st4 protein_coding protein_coding MGP_129S1SvImJ_T0075359.1 MGP_129S1SvImJ_G0030265.1 mouse_genomes_project 5 143114715 143122541 - MGP_129S1SvImJ_P0075359 Gal3st4 protein_coding protein_coding MGP_129S1SvImJ_T0075360.1 MGP_129S1SvImJ_G0030265.1 mouse_genomes_project 5 143114728 143122588 - Gal3st4 protein_coding processed_transcript MGP_129S1SvImJ_T0075361.1 MGP_129S1SvImJ_G0030265.1 mouse_genomes_project 5 143114728 143122588 - MGP_129S1SvImJ_P0075361 Gal3st4 protein_coding protein_coding MGP_129S1SvImJ_T0075363.1 MGP_129S1SvImJ_G0030265.1 mouse_genomes_project 5 143120779 143122536 - MGP_129S1SvImJ_P0075363 Gal3st4 protein_coding protein_coding MGP_129S1SvImJ_T0015062.1 MGP_129S1SvImJ_G0013151.1 mouse_genomes_project 5 78923775 78924139 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0071582.1 MGP_129S1SvImJ_G0029537.1 mouse_genomes_project 5 44410974 44573419 - MGP_129S1SvImJ_P0071582 Lcorl protein_coding protein_coding MGP_129S1SvImJ_T0071583.1 MGP_129S1SvImJ_G0029537.1 mouse_genomes_project 5 44410977 44573271 - MGP_129S1SvImJ_P0071583 Lcorl protein_coding protein_coding MGP_129S1SvImJ_T0071585.1 MGP_129S1SvImJ_G0029537.1 mouse_genomes_project 5 44414243 44570039 - MGP_129S1SvImJ_P0071585 Lcorl protein_coding protein_coding MGP_129S1SvImJ_T0071586.1 MGP_129S1SvImJ_G0029537.1 mouse_genomes_project 5 44415239 44438139 - Lcorl protein_coding processed_transcript MGP_129S1SvImJ_T0071587.1 MGP_129S1SvImJ_G0029537.1 mouse_genomes_project 5 44434502 44442414 - Lcorl protein_coding retained_intron MGP_129S1SvImJ_T0071588.1 MGP_129S1SvImJ_G0029537.1 mouse_genomes_project 5 44448291 44573301 - MGP_129S1SvImJ_P0071588 Lcorl protein_coding protein_coding MGP_129S1SvImJ_T0071589.1 MGP_129S1SvImJ_G0029537.1 mouse_genomes_project 5 44462089 44573271 - MGP_129S1SvImJ_P0071589 Lcorl protein_coding protein_coding MGP_129S1SvImJ_T0071590.1 MGP_129S1SvImJ_G0029537.1 mouse_genomes_project 5 44462110 44573285 - MGP_129S1SvImJ_P0071590 Lcorl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071591.1 MGP_129S1SvImJ_G0029537.1 mouse_genomes_project 5 44487997 44573305 - Lcorl protein_coding processed_transcript MGP_129S1SvImJ_T0071592.1 MGP_129S1SvImJ_G0029537.1 mouse_genomes_project 5 44489983 44573419 - Lcorl protein_coding retained_intron MGP_129S1SvImJ_T0071593.1 MGP_129S1SvImJ_G0029537.1 mouse_genomes_project 5 44490153 44573292 - MGP_129S1SvImJ_P0071593 Lcorl protein_coding protein_coding MGP_129S1SvImJ_T0074105.1 MGP_129S1SvImJ_G0030046.1 mouse_genomes_project 5 125911491 125951870 + MGP_129S1SvImJ_P0074105 Pptc7 protein_coding protein_coding MGP_129S1SvImJ_T0004652.1 MGP_129S1SvImJ_G0004033.1 mouse_genomes_project 5 11308971 11325907 - Gm4128 antisense antisense MGP_129S1SvImJ_T0073205.1 MGP_129S1SvImJ_G0029873.1 mouse_genomes_project 5 111631797 111664907 + MGP_129S1SvImJ_P0073205 Vmn2r16 protein_coding protein_coding MGP_129S1SvImJ_T0008281.1 MGP_129S1SvImJ_G0006746.1 mouse_genomes_project 5 112703524 112713405 + Gm26718 lincRNA lincRNA MGP_129S1SvImJ_T0015111.1 MGP_129S1SvImJ_G0013200.1 mouse_genomes_project 5 104896371 104896959 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073049.1 MGP_129S1SvImJ_G0029839.1 mouse_genomes_project 5 109541895 109555735 + MGP_129S1SvImJ_P0073049 protein_coding protein_coding MGP_129S1SvImJ_T0073050.1 MGP_129S1SvImJ_G0029839.1 mouse_genomes_project 5 109542262 109557084 + MGP_129S1SvImJ_P0073050 protein_coding protein_coding MGP_129S1SvImJ_T0073051.1 MGP_129S1SvImJ_G0029839.1 mouse_genomes_project 5 109542293 109551618 + MGP_129S1SvImJ_P0073051 protein_coding protein_coding MGP_129S1SvImJ_T0073052.1 MGP_129S1SvImJ_G0029839.1 mouse_genomes_project 5 109542296 109554736 + MGP_129S1SvImJ_P0073052 protein_coding protein_coding MGP_129S1SvImJ_T0073053.1 MGP_129S1SvImJ_G0029839.1 mouse_genomes_project 5 109548468 109551750 + protein_coding processed_transcript MGP_129S1SvImJ_T0070504.1 MGP_129S1SvImJ_G0029353.1 mouse_genomes_project 5 22447754 22473329 + MGP_129S1SvImJ_P0070504 Nub1 protein_coding protein_coding MGP_129S1SvImJ_T0070505.1 MGP_129S1SvImJ_G0029353.1 mouse_genomes_project 5 22448046 22473331 + MGP_129S1SvImJ_P0070505 Nub1 protein_coding protein_coding MGP_129S1SvImJ_T0070506.1 MGP_129S1SvImJ_G0029353.1 mouse_genomes_project 5 22448209 22473329 + Nub1 protein_coding retained_intron MGP_129S1SvImJ_T0014885.1 MGP_129S1SvImJ_G0012974.1 mouse_genomes_project 5 11112297 11113261 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008487.1 MGP_129S1SvImJ_G0006883.1 mouse_genomes_project 5 156513952 156514218 - Gm43690 lincRNA lincRNA MGP_129S1SvImJ_T0071016.1 MGP_129S1SvImJ_G0029443.1 mouse_genomes_project 5 31416291 31448513 - MGP_129S1SvImJ_P0071016 Ctbp1 protein_coding protein_coding MGP_129S1SvImJ_T0071017.1 MGP_129S1SvImJ_G0029443.1 mouse_genomes_project 5 31416322 31448511 - MGP_129S1SvImJ_P0071017 Ctbp1 protein_coding protein_coding MGP_129S1SvImJ_T0071018.1 MGP_129S1SvImJ_G0029443.1 mouse_genomes_project 5 31416593 31448500 - MGP_129S1SvImJ_P0071018 Ctbp1 protein_coding protein_coding MGP_129S1SvImJ_T0071019.1 MGP_129S1SvImJ_G0029443.1 mouse_genomes_project 5 31416736 31417819 - Ctbp1 protein_coding retained_intron MGP_129S1SvImJ_T0071020.1 MGP_129S1SvImJ_G0029443.1 mouse_genomes_project 5 31416829 31418122 - Ctbp1 protein_coding retained_intron MGP_129S1SvImJ_T0071021.1 MGP_129S1SvImJ_G0029443.1 mouse_genomes_project 5 31417068 31448480 - MGP_129S1SvImJ_P0071021 Ctbp1 protein_coding protein_coding MGP_129S1SvImJ_T0071022.1 MGP_129S1SvImJ_G0029443.1 mouse_genomes_project 5 31418951 31441353 - MGP_129S1SvImJ_P0071022 Ctbp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071023.1 MGP_129S1SvImJ_G0029443.1 mouse_genomes_project 5 31419426 31448498 - MGP_129S1SvImJ_P0071023 Ctbp1 protein_coding protein_coding MGP_129S1SvImJ_T0071024.1 MGP_129S1SvImJ_G0029443.1 mouse_genomes_project 5 31427867 31441501 - MGP_129S1SvImJ_P0071024 Ctbp1 protein_coding protein_coding MGP_129S1SvImJ_T0071025.1 MGP_129S1SvImJ_G0029443.1 mouse_genomes_project 5 31429209 31441389 - Ctbp1 protein_coding retained_intron MGP_129S1SvImJ_T0071026.1 MGP_129S1SvImJ_G0029443.1 mouse_genomes_project 5 31429625 31446454 - MGP_129S1SvImJ_P0071026 Ctbp1 protein_coding protein_coding MGP_129S1SvImJ_T0071027.1 MGP_129S1SvImJ_G0029443.1 mouse_genomes_project 5 31437481 31446465 - MGP_129S1SvImJ_P0071027 Ctbp1 protein_coding protein_coding MGP_129S1SvImJ_T0015236.1 MGP_129S1SvImJ_G0013325.1 mouse_genomes_project 5 153517589 153518083 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0071783.1 MGP_129S1SvImJ_G0029571.1 mouse_genomes_project 5 64669867 64708506 - Tmem156 protein_coding processed_transcript MGP_129S1SvImJ_T0071784.1 MGP_129S1SvImJ_G0029571.1 mouse_genomes_project 5 64679119 64708461 - MGP_129S1SvImJ_P0071784 Tmem156 protein_coding protein_coding MGP_129S1SvImJ_T0071785.1 MGP_129S1SvImJ_G0029571.1 mouse_genomes_project 5 64707591 64708502 - Tmem156 protein_coding retained_intron MGP_129S1SvImJ_T0098609.1 MGP_129S1SvImJ_G0036694.1 mouse_genomes_project 5 122546318 122546435 + n-R5s175 rRNA rRNA MGP_129S1SvImJ_T0073468.1 MGP_129S1SvImJ_G0029926.1 mouse_genomes_project 5 116529060 116600658 - MGP_129S1SvImJ_P0073468 Coro1c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073469.1 MGP_129S1SvImJ_G0029926.1 mouse_genomes_project 5 116529060 116600711 - MGP_129S1SvImJ_P0073469 Coro1c protein_coding protein_coding MGP_129S1SvImJ_T0073470.1 MGP_129S1SvImJ_G0029926.1 mouse_genomes_project 5 116531881 116538762 - Coro1c protein_coding retained_intron MGP_129S1SvImJ_T0073471.1 MGP_129S1SvImJ_G0029926.1 mouse_genomes_project 5 116531892 116537765 - Coro1c protein_coding retained_intron MGP_129S1SvImJ_T0073472.1 MGP_129S1SvImJ_G0029926.1 mouse_genomes_project 5 116532827 116534263 - Coro1c protein_coding retained_intron MGP_129S1SvImJ_T0073473.1 MGP_129S1SvImJ_G0029926.1 mouse_genomes_project 5 116534754 116537570 - Coro1c protein_coding retained_intron MGP_129S1SvImJ_T0073474.1 MGP_129S1SvImJ_G0029926.1 mouse_genomes_project 5 116535178 116562546 - Coro1c protein_coding processed_transcript MGP_129S1SvImJ_T0073475.1 MGP_129S1SvImJ_G0029926.1 mouse_genomes_project 5 116535237 116546683 - Coro1c protein_coding processed_transcript MGP_129S1SvImJ_T0073476.1 MGP_129S1SvImJ_G0029926.1 mouse_genomes_project 5 116553625 116570833 - MGP_129S1SvImJ_P0073476 Coro1c protein_coding protein_coding MGP_129S1SvImJ_T0073477.1 MGP_129S1SvImJ_G0029926.1 mouse_genomes_project 5 116553683 116570319 - MGP_129S1SvImJ_P0073477 Coro1c protein_coding protein_coding MGP_129S1SvImJ_T0073478.1 MGP_129S1SvImJ_G0029926.1 mouse_genomes_project 5 116564958 116600598 - Coro1c protein_coding retained_intron MGP_129S1SvImJ_T0075526.1 MGP_129S1SvImJ_G0030298.1 mouse_genomes_project 5 145400250 145454932 - MGP_129S1SvImJ_P0075526 Snx8 protein_coding protein_coding MGP_129S1SvImJ_T0075527.1 MGP_129S1SvImJ_G0030298.1 mouse_genomes_project 5 145400255 145420769 - MGP_129S1SvImJ_P0075527 Snx8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075528.1 MGP_129S1SvImJ_G0030298.1 mouse_genomes_project 5 145413142 145413901 - Snx8 protein_coding retained_intron MGP_129S1SvImJ_T0075529.1 MGP_129S1SvImJ_G0030298.1 mouse_genomes_project 5 145413818 145428652 - MGP_129S1SvImJ_P0075529 Snx8 protein_coding protein_coding MGP_129S1SvImJ_T0075530.1 MGP_129S1SvImJ_G0030298.1 mouse_genomes_project 5 145413834 145454932 - MGP_129S1SvImJ_P0075530 Snx8 protein_coding protein_coding MGP_129S1SvImJ_T0001877.1 MGP_129S1SvImJ_G0001791.1 mouse_genomes_project 5 136143034 136146015 - TEC TEC MGP_129S1SvImJ_T0008453.1 MGP_129S1SvImJ_G0006859.1 mouse_genomes_project 5 153085137 153088711 + D5Ertd605e lincRNA lincRNA MGP_129S1SvImJ_T0001537.1 MGP_129S1SvImJ_G0001455.1 mouse_genomes_project 5 36540020 36541432 - TEC TEC MGP_129S1SvImJ_T0099960.1 MGP_129S1SvImJ_G0038027.1 mouse_genomes_project 5 118383404 118383545 + Gm24407 snRNA snRNA MGP_129S1SvImJ_T0008220.1 MGP_129S1SvImJ_G0006704.1 mouse_genomes_project 5 98272587 98273746 - Gm9484 lincRNA lincRNA MGP_129S1SvImJ_T0001495.1 MGP_129S1SvImJ_G0001416.1 mouse_genomes_project 5 21873925 21876516 + TEC TEC MGP_129S1SvImJ_T0018184.1 MGP_129S1SvImJ_G0015601.1 mouse_genomes_project 5 64302836 64405867 - Gm20033 processed_transcript antisense MGP_129S1SvImJ_T0018185.1 MGP_129S1SvImJ_G0015601.1 mouse_genomes_project 5 64302840 64303564 - Gm20033 processed_transcript retained_intron MGP_129S1SvImJ_T0018186.1 MGP_129S1SvImJ_G0015601.1 mouse_genomes_project 5 64302954 64310096 - Gm20033 processed_transcript retained_intron MGP_129S1SvImJ_T0018187.1 MGP_129S1SvImJ_G0015601.1 mouse_genomes_project 5 64304351 64317943 - Gm20033 processed_transcript processed_transcript MGP_129S1SvImJ_T0018188.1 MGP_129S1SvImJ_G0015601.1 mouse_genomes_project 5 64402764 64405586 - Gm20033 processed_transcript retained_intron MGP_129S1SvImJ_T0018189.1 MGP_129S1SvImJ_G0015601.1 mouse_genomes_project 5 64402860 64405866 - Gm20033 processed_transcript antisense MGP_129S1SvImJ_T0072717.1 MGP_129S1SvImJ_G0029763.1 mouse_genomes_project 5 97291187 97302580 - Cnot6l protein_coding retained_intron MGP_129S1SvImJ_T0072718.1 MGP_129S1SvImJ_G0029763.1 mouse_genomes_project 5 97291200 97380569 - MGP_129S1SvImJ_P0072718 Cnot6l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072719.1 MGP_129S1SvImJ_G0029763.1 mouse_genomes_project 5 97291348 97380569 - MGP_129S1SvImJ_P0072719 Cnot6l protein_coding protein_coding MGP_129S1SvImJ_T0072720.1 MGP_129S1SvImJ_G0029763.1 mouse_genomes_project 5 97292791 97380772 - MGP_129S1SvImJ_P0072720 Cnot6l protein_coding protein_coding MGP_129S1SvImJ_T0072721.1 MGP_129S1SvImJ_G0029763.1 mouse_genomes_project 5 97324392 97349829 - Cnot6l protein_coding retained_intron MGP_129S1SvImJ_T0072722.1 MGP_129S1SvImJ_G0029763.1 mouse_genomes_project 5 97325081 97380556 - MGP_129S1SvImJ_P0072722 Cnot6l protein_coding protein_coding MGP_129S1SvImJ_T0072723.1 MGP_129S1SvImJ_G0029763.1 mouse_genomes_project 5 97349829 97380685 - MGP_129S1SvImJ_P0072723 Cnot6l protein_coding protein_coding MGP_129S1SvImJ_T0072724.1 MGP_129S1SvImJ_G0029763.1 mouse_genomes_project 5 97349865 97382980 - MGP_129S1SvImJ_P0072724 Cnot6l protein_coding protein_coding MGP_129S1SvImJ_T0072725.1 MGP_129S1SvImJ_G0029763.1 mouse_genomes_project 5 97349976 97380577 - MGP_129S1SvImJ_P0072725 Cnot6l protein_coding protein_coding MGP_129S1SvImJ_T0099926.1 MGP_129S1SvImJ_G0037993.1 mouse_genomes_project 5 70044474 70044536 - Gm23067 snRNA snRNA MGP_129S1SvImJ_T0004691.1 MGP_129S1SvImJ_G0004067.1 mouse_genomes_project 5 36726050 36729615 - Gm26560 antisense antisense MGP_129S1SvImJ_T0074260.1 MGP_129S1SvImJ_G0030068.1 mouse_genomes_project 5 126969786 127057701 + MGP_129S1SvImJ_P0074260 Wdr66 protein_coding protein_coding MGP_129S1SvImJ_T0074261.1 MGP_129S1SvImJ_G0030068.1 mouse_genomes_project 5 126992062 127018978 + Wdr66 protein_coding retained_intron MGP_129S1SvImJ_T0074262.1 MGP_129S1SvImJ_G0030068.1 mouse_genomes_project 5 126992062 127015017 + MGP_129S1SvImJ_P0074262 Wdr66 protein_coding protein_coding MGP_129S1SvImJ_T0074263.1 MGP_129S1SvImJ_G0030068.1 mouse_genomes_project 5 126992062 127018980 + MGP_129S1SvImJ_P0074263 Wdr66 protein_coding protein_coding MGP_129S1SvImJ_T0074264.1 MGP_129S1SvImJ_G0030068.1 mouse_genomes_project 5 126993924 127018929 + Wdr66 protein_coding retained_intron MGP_129S1SvImJ_T0074265.1 MGP_129S1SvImJ_G0030068.1 mouse_genomes_project 5 126998503 126999957 + Wdr66 protein_coding retained_intron MGP_129S1SvImJ_T0074266.1 MGP_129S1SvImJ_G0030068.1 mouse_genomes_project 5 127010313 127057011 + MGP_129S1SvImJ_P0074266 Wdr66 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074267.1 MGP_129S1SvImJ_G0030068.1 mouse_genomes_project 5 127015103 127056847 + MGP_129S1SvImJ_P0074267 Wdr66 protein_coding protein_coding MGP_129S1SvImJ_T0074268.1 MGP_129S1SvImJ_G0030068.1 mouse_genomes_project 5 127027063 127056866 + Wdr66 protein_coding retained_intron MGP_129S1SvImJ_T0004725.1 MGP_129S1SvImJ_G0004092.1 mouse_genomes_project 5 67038234 67039529 - Gm42670 antisense antisense MGP_129S1SvImJ_T0071260.1 MGP_129S1SvImJ_G0029477.1 mouse_genomes_project 5 33545606 33549051 + MGP_129S1SvImJ_P0071260 Adra2c protein_coding protein_coding MGP_129S1SvImJ_T0001494.1 MGP_129S1SvImJ_G0001415.1 mouse_genomes_project 5 21476986 21477877 + TEC TEC MGP_129S1SvImJ_T0072639.1 MGP_129S1SvImJ_G0029749.1 mouse_genomes_project 5 93516049 93585736 + MGP_129S1SvImJ_P0072639 Art3 protein_coding protein_coding MGP_129S1SvImJ_T0072640.1 MGP_129S1SvImJ_G0029749.1 mouse_genomes_project 5 93516052 93585933 + MGP_129S1SvImJ_P0072640 Art3 protein_coding protein_coding MGP_129S1SvImJ_T0072641.1 MGP_129S1SvImJ_G0029749.1 mouse_genomes_project 5 93516063 93530929 + Art3 protein_coding processed_transcript MGP_129S1SvImJ_T0072642.1 MGP_129S1SvImJ_G0029749.1 mouse_genomes_project 5 93516063 93612427 + MGP_129S1SvImJ_P0072642 Art3 protein_coding protein_coding MGP_129S1SvImJ_T0072643.1 MGP_129S1SvImJ_G0029749.1 mouse_genomes_project 5 93516063 93612424 + MGP_129S1SvImJ_P0072643 Art3 protein_coding protein_coding MGP_129S1SvImJ_T0072649.1 MGP_129S1SvImJ_G0029749.1 mouse_genomes_project 5 93567225 93585848 + MGP_129S1SvImJ_P0072649 Art3 protein_coding protein_coding MGP_129S1SvImJ_T0072650.1 MGP_129S1SvImJ_G0029749.1 mouse_genomes_project 5 93579688 93585819 + MGP_129S1SvImJ_P0072650 Art3 protein_coding protein_coding MGP_129S1SvImJ_T0072651.1 MGP_129S1SvImJ_G0029749.1 mouse_genomes_project 5 93580564 93585527 + MGP_129S1SvImJ_P0072651 Art3 protein_coding protein_coding MGP_129S1SvImJ_T0072652.1 MGP_129S1SvImJ_G0029749.1 mouse_genomes_project 5 93580647 93585397 + MGP_129S1SvImJ_P0072652 Art3 protein_coding protein_coding MGP_129S1SvImJ_T0072653.1 MGP_129S1SvImJ_G0029749.1 mouse_genomes_project 5 93580652 93585778 + MGP_129S1SvImJ_P0072653 Art3 protein_coding protein_coding MGP_129S1SvImJ_T0072654.1 MGP_129S1SvImJ_G0029749.1 mouse_genomes_project 5 93580944 93612421 + Art3 protein_coding processed_transcript MGP_129S1SvImJ_T0072655.1 MGP_129S1SvImJ_G0029749.1 mouse_genomes_project 5 93580944 93612421 + MGP_129S1SvImJ_P0072655 Art3 protein_coding protein_coding MGP_129S1SvImJ_T0072656.1 MGP_129S1SvImJ_G0029749.1 mouse_genomes_project 5 93580944 93612422 + MGP_129S1SvImJ_P0072656 Art3 protein_coding protein_coding MGP_129S1SvImJ_T0072657.1 MGP_129S1SvImJ_G0029749.1 mouse_genomes_project 5 93580944 93612421 + MGP_129S1SvImJ_P0072657 Art3 protein_coding protein_coding MGP_129S1SvImJ_T0072658.1 MGP_129S1SvImJ_G0029749.1 mouse_genomes_project 5 93580944 93612421 + MGP_129S1SvImJ_P0072658 Art3 protein_coding protein_coding MGP_129S1SvImJ_T0072659.1 MGP_129S1SvImJ_G0029749.1 mouse_genomes_project 5 93580944 93612421 + MGP_129S1SvImJ_P0072659 Art3 protein_coding protein_coding MGP_129S1SvImJ_T0072660.1 MGP_129S1SvImJ_G0029749.1 mouse_genomes_project 5 93585386 93612421 + MGP_129S1SvImJ_P0072660 Art3 protein_coding protein_coding MGP_129S1SvImJ_T0072661.1 MGP_129S1SvImJ_G0029749.1 mouse_genomes_project 5 93585860 93612422 + MGP_129S1SvImJ_P0072661 Art3 protein_coding protein_coding MGP_129S1SvImJ_T0072662.1 MGP_129S1SvImJ_G0029749.1 mouse_genomes_project 5 93597804 93612246 + MGP_129S1SvImJ_P0072662 Art3 protein_coding protein_coding MGP_129S1SvImJ_T0008337.1 MGP_129S1SvImJ_G0006779.1 mouse_genomes_project 5 119851659 119855942 + lincRNA lincRNA MGP_129S1SvImJ_T0070667.1 MGP_129S1SvImJ_G0029389.1 mouse_genomes_project 5 28296829 28402198 - MGP_129S1SvImJ_P0070667 Otof protein_coding protein_coding MGP_129S1SvImJ_T0070668.1 MGP_129S1SvImJ_G0029389.1 mouse_genomes_project 5 28296829 28402168 - MGP_129S1SvImJ_P0070668 Otof protein_coding protein_coding MGP_129S1SvImJ_T0070669.1 MGP_129S1SvImJ_G0029389.1 mouse_genomes_project 5 28296835 28402198 - Otof protein_coding retained_intron MGP_129S1SvImJ_T0070670.1 MGP_129S1SvImJ_G0029389.1 mouse_genomes_project 5 28297061 28402125 - Otof protein_coding retained_intron MGP_129S1SvImJ_T0070671.1 MGP_129S1SvImJ_G0029389.1 mouse_genomes_project 5 28341327 28344477 - Otof protein_coding retained_intron MGP_129S1SvImJ_T0070363.1 MGP_129S1SvImJ_G0029328.1 mouse_genomes_project 5 20315708 20898451 + MGP_129S1SvImJ_P0070363 Lhfpl3 protein_coding protein_coding MGP_129S1SvImJ_T0070364.1 MGP_129S1SvImJ_G0029328.1 mouse_genomes_project 5 20711511 20898442 + MGP_129S1SvImJ_P0070364 Lhfpl3 protein_coding protein_coding MGP_129S1SvImJ_T0001477.1 MGP_129S1SvImJ_G0001398.1 mouse_genomes_project 5 11839498 11843237 + TEC TEC MGP_129S1SvImJ_T0075852.1 MGP_129S1SvImJ_G0030365.1 mouse_genomes_project 5 150714475 150720445 + MGP_129S1SvImJ_P0075852 protein_coding protein_coding MGP_129S1SvImJ_T0075853.1 MGP_129S1SvImJ_G0030365.1 mouse_genomes_project 5 150714528 150725181 + MGP_129S1SvImJ_P0075853 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0075854.1 MGP_129S1SvImJ_G0030365.1 mouse_genomes_project 5 150717334 150725299 + MGP_129S1SvImJ_P0075854 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0001458.1 MGP_129S1SvImJ_G0001379.1 mouse_genomes_project 5 4231321 4232865 - TEC TEC MGP_129S1SvImJ_T0001914.1 MGP_129S1SvImJ_G0001827.1 mouse_genomes_project 5 146458603 146459564 - TEC TEC MGP_129S1SvImJ_T0075889.1 MGP_129S1SvImJ_G0030378.1 mouse_genomes_project 5 152346790 152402717 - MGP_129S1SvImJ_P0075889 Usp12 protein_coding protein_coding MGP_129S1SvImJ_T0075890.1 MGP_129S1SvImJ_G0030378.1 mouse_genomes_project 5 152346820 152365500 - Usp12 protein_coding processed_transcript MGP_129S1SvImJ_T0075891.1 MGP_129S1SvImJ_G0030378.1 mouse_genomes_project 5 152353771 152365508 - Usp12 protein_coding processed_transcript MGP_129S1SvImJ_T0004733.1 MGP_129S1SvImJ_G0004099.1 mouse_genomes_project 5 73139446 73140319 + 1700071G01Rik antisense antisense MGP_129S1SvImJ_T0004663.1 MGP_129S1SvImJ_G0004043.1 mouse_genomes_project 5 22088814 22106830 - Gm15587 antisense antisense MGP_129S1SvImJ_T0004664.1 MGP_129S1SvImJ_G0004043.1 mouse_genomes_project 5 22091811 22106862 - Gm15587 antisense antisense MGP_129S1SvImJ_T0008313.1 MGP_129S1SvImJ_G0006762.1 mouse_genomes_project 5 115173232 115180291 - 1700034G24Rik lincRNA lincRNA MGP_129S1SvImJ_T0008314.1 MGP_129S1SvImJ_G0006762.1 mouse_genomes_project 5 115173321 115180291 - 1700034G24Rik lincRNA lincRNA MGP_129S1SvImJ_T0074180.1 MGP_129S1SvImJ_G0030058.1 mouse_genomes_project 5 126438581 126476963 - MGP_129S1SvImJ_P0074180 Anapc5 protein_coding protein_coding MGP_129S1SvImJ_T0074181.1 MGP_129S1SvImJ_G0030058.1 mouse_genomes_project 5 126438843 126476911 - MGP_129S1SvImJ_P0074181 Anapc5 protein_coding protein_coding MGP_129S1SvImJ_T0074182.1 MGP_129S1SvImJ_G0030058.1 mouse_genomes_project 5 126438843 126476904 - MGP_129S1SvImJ_P0074182 Anapc5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074183.1 MGP_129S1SvImJ_G0030058.1 mouse_genomes_project 5 126438843 126476911 - MGP_129S1SvImJ_P0074183 Anapc5 protein_coding protein_coding MGP_129S1SvImJ_T0074184.1 MGP_129S1SvImJ_G0030058.1 mouse_genomes_project 5 126438845 126476904 - MGP_129S1SvImJ_P0074184 Anapc5 protein_coding protein_coding MGP_129S1SvImJ_T0074185.1 MGP_129S1SvImJ_G0030058.1 mouse_genomes_project 5 126438849 126476904 - MGP_129S1SvImJ_P0074185 Anapc5 protein_coding protein_coding MGP_129S1SvImJ_T0074186.1 MGP_129S1SvImJ_G0030058.1 mouse_genomes_project 5 126438853 126476918 - MGP_129S1SvImJ_P0074186 Anapc5 protein_coding protein_coding MGP_129S1SvImJ_T0074187.1 MGP_129S1SvImJ_G0030058.1 mouse_genomes_project 5 126439037 126448320 - MGP_129S1SvImJ_P0074187 Anapc5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074188.1 MGP_129S1SvImJ_G0030058.1 mouse_genomes_project 5 126439538 126455585 - Anapc5 protein_coding retained_intron MGP_129S1SvImJ_T0074189.1 MGP_129S1SvImJ_G0030058.1 mouse_genomes_project 5 126442979 126449280 - MGP_129S1SvImJ_P0074189 Anapc5 protein_coding protein_coding MGP_129S1SvImJ_T0074190.1 MGP_129S1SvImJ_G0030058.1 mouse_genomes_project 5 126448241 126458312 - Anapc5 protein_coding retained_intron MGP_129S1SvImJ_T0074191.1 MGP_129S1SvImJ_G0030058.1 mouse_genomes_project 5 126455249 126463198 - MGP_129S1SvImJ_P0074191 Anapc5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074192.1 MGP_129S1SvImJ_G0030058.1 mouse_genomes_project 5 126455324 126474207 - Anapc5 protein_coding processed_transcript MGP_129S1SvImJ_T0074193.1 MGP_129S1SvImJ_G0030058.1 mouse_genomes_project 5 126455949 126462195 - Anapc5 protein_coding retained_intron MGP_129S1SvImJ_T0074194.1 MGP_129S1SvImJ_G0030058.1 mouse_genomes_project 5 126456134 126476903 - Anapc5 protein_coding retained_intron MGP_129S1SvImJ_T0074195.1 MGP_129S1SvImJ_G0030058.1 mouse_genomes_project 5 126461688 126476642 - Anapc5 protein_coding retained_intron MGP_129S1SvImJ_T0074196.1 MGP_129S1SvImJ_G0030058.1 mouse_genomes_project 5 126463183 126476894 - MGP_129S1SvImJ_P0074196 Anapc5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074197.1 MGP_129S1SvImJ_G0030058.1 mouse_genomes_project 5 126473480 126476899 - Anapc5 protein_coding processed_transcript MGP_129S1SvImJ_T0008457.1 MGP_129S1SvImJ_G0006863.1 mouse_genomes_project 5 154501023 154502323 + 2210417A02Rik lincRNA lincRNA MGP_129S1SvImJ_T0074099.1 MGP_129S1SvImJ_G0030045.1 mouse_genomes_project 5 125860950 125887577 - MGP_129S1SvImJ_P0074099 Tctn1 protein_coding protein_coding MGP_129S1SvImJ_T0074100.1 MGP_129S1SvImJ_G0030045.1 mouse_genomes_project 5 125862605 125887486 - MGP_129S1SvImJ_P0074100 Tctn1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0074101.1 MGP_129S1SvImJ_G0030045.1 mouse_genomes_project 5 125864404 125887577 - MGP_129S1SvImJ_P0074101 Tctn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074102.1 MGP_129S1SvImJ_G0030045.1 mouse_genomes_project 5 125868688 125874798 - Tctn1 protein_coding processed_transcript MGP_129S1SvImJ_T0074103.1 MGP_129S1SvImJ_G0030045.1 mouse_genomes_project 5 125871557 125877683 - Tctn1 protein_coding retained_intron MGP_129S1SvImJ_T0074104.1 MGP_129S1SvImJ_G0030045.1 mouse_genomes_project 5 125875443 125887532 - Tctn1 protein_coding retained_intron MGP_129S1SvImJ_T0072223.1 MGP_129S1SvImJ_G0029644.1 mouse_genomes_project 5 76506001 76538695 - MGP_129S1SvImJ_P0072223 Nmu protein_coding protein_coding MGP_129S1SvImJ_T0071759.1 MGP_129S1SvImJ_G0029566.1 mouse_genomes_project 5 63731454 63749876 + MGP_129S1SvImJ_P0071759 Tbc1d1 protein_coding protein_coding MGP_129S1SvImJ_T0071760.1 MGP_129S1SvImJ_G0029566.1 mouse_genomes_project 5 63734570 63937476 + MGP_129S1SvImJ_P0071760 Tbc1d1 protein_coding protein_coding MGP_129S1SvImJ_T0071761.1 MGP_129S1SvImJ_G0029566.1 mouse_genomes_project 5 63734939 63937476 + MGP_129S1SvImJ_P0071761 Tbc1d1 protein_coding protein_coding MGP_129S1SvImJ_T0071762.1 MGP_129S1SvImJ_G0029566.1 mouse_genomes_project 5 63735330 63750617 + Tbc1d1 protein_coding retained_intron MGP_129S1SvImJ_T0071763.1 MGP_129S1SvImJ_G0029566.1 mouse_genomes_project 5 63735330 63937476 + MGP_129S1SvImJ_P0071763 Tbc1d1 protein_coding protein_coding MGP_129S1SvImJ_T0071764.1 MGP_129S1SvImJ_G0029566.1 mouse_genomes_project 5 63812449 63937476 + MGP_129S1SvImJ_P0071764 Tbc1d1 protein_coding protein_coding MGP_129S1SvImJ_T0071765.1 MGP_129S1SvImJ_G0029566.1 mouse_genomes_project 5 63860269 63869589 + MGP_129S1SvImJ_P0071765 Tbc1d1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071766.1 MGP_129S1SvImJ_G0029566.1 mouse_genomes_project 5 63883368 63937471 + Tbc1d1 protein_coding processed_transcript MGP_129S1SvImJ_T0008346.1 MGP_129S1SvImJ_G0006786.1 mouse_genomes_project 5 122348957 122356533 + 1700081H04Rik lincRNA lincRNA MGP_129S1SvImJ_T0073638.1 MGP_129S1SvImJ_G0029958.1 mouse_genomes_project 5 117956732 117971264 - MGP_129S1SvImJ_P0073638 Unc119b protein_coding protein_coding MGP_129S1SvImJ_T0073639.1 MGP_129S1SvImJ_G0029958.1 mouse_genomes_project 5 117959371 117963804 - Unc119b protein_coding retained_intron MGP_129S1SvImJ_T0073640.1 MGP_129S1SvImJ_G0029958.1 mouse_genomes_project 5 117965913 117971214 - Unc119b protein_coding retained_intron MGP_129S1SvImJ_T0008167.1 MGP_129S1SvImJ_G0006660.1 mouse_genomes_project 5 67133879 67142177 + Gm43698 lincRNA lincRNA MGP_129S1SvImJ_T0008168.1 MGP_129S1SvImJ_G0006660.1 mouse_genomes_project 5 67141904 67142998 + Gm43698 lincRNA lincRNA MGP_129S1SvImJ_T0073315.1 MGP_129S1SvImJ_G0029893.1 mouse_genomes_project 5 113265167 113290502 - MGP_129S1SvImJ_P0073315 Ulk1 protein_coding protein_coding MGP_129S1SvImJ_T0073316.1 MGP_129S1SvImJ_G0029893.1 mouse_genomes_project 5 113266456 113268402 - MGP_129S1SvImJ_P0073316 Ulk1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073317.1 MGP_129S1SvImJ_G0029893.1 mouse_genomes_project 5 113266478 113269510 - MGP_129S1SvImJ_P0073317 Ulk1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073318.1 MGP_129S1SvImJ_G0029893.1 mouse_genomes_project 5 113266495 113267678 - Ulk1 protein_coding retained_intron MGP_129S1SvImJ_T0073319.1 MGP_129S1SvImJ_G0029893.1 mouse_genomes_project 5 113266550 113290458 - MGP_129S1SvImJ_P0073319 Ulk1 protein_coding protein_coding MGP_129S1SvImJ_T0073320.1 MGP_129S1SvImJ_G0029893.1 mouse_genomes_project 5 113268347 113269124 - Ulk1 protein_coding retained_intron MGP_129S1SvImJ_T0073321.1 MGP_129S1SvImJ_G0029893.1 mouse_genomes_project 5 113268713 113269923 - Ulk1 protein_coding retained_intron MGP_129S1SvImJ_T0073322.1 MGP_129S1SvImJ_G0029893.1 mouse_genomes_project 5 113271854 113272649 - Ulk1 protein_coding retained_intron MGP_129S1SvImJ_T0073323.1 MGP_129S1SvImJ_G0029893.1 mouse_genomes_project 5 113272129 113273862 - Ulk1 protein_coding retained_intron MGP_129S1SvImJ_T0073324.1 MGP_129S1SvImJ_G0029893.1 mouse_genomes_project 5 113272852 113276253 - Ulk1 protein_coding processed_transcript MGP_129S1SvImJ_T0073325.1 MGP_129S1SvImJ_G0029893.1 mouse_genomes_project 5 113274057 113276290 - Ulk1 protein_coding retained_intron MGP_129S1SvImJ_T0070991.1 MGP_129S1SvImJ_G0029439.1 mouse_genomes_project 5 31003660 31037809 + MGP_129S1SvImJ_P0070991 Depdc5 protein_coding protein_coding MGP_129S1SvImJ_T0070992.1 MGP_129S1SvImJ_G0029439.1 mouse_genomes_project 5 31003675 31099631 + MGP_129S1SvImJ_P0070992 Depdc5 protein_coding protein_coding MGP_129S1SvImJ_T0070993.1 MGP_129S1SvImJ_G0029439.1 mouse_genomes_project 5 31003688 31144819 + MGP_129S1SvImJ_P0070993 Depdc5 protein_coding protein_coding MGP_129S1SvImJ_T0070994.1 MGP_129S1SvImJ_G0029439.1 mouse_genomes_project 5 31003714 31048619 + Depdc5 protein_coding retained_intron MGP_129S1SvImJ_T0070995.1 MGP_129S1SvImJ_G0029439.1 mouse_genomes_project 5 31003724 31028507 + Depdc5 protein_coding retained_intron MGP_129S1SvImJ_T0070996.1 MGP_129S1SvImJ_G0029439.1 mouse_genomes_project 5 31003724 31067861 + MGP_129S1SvImJ_P0070996 Depdc5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070997.1 MGP_129S1SvImJ_G0029439.1 mouse_genomes_project 5 31003726 31019444 + MGP_129S1SvImJ_P0070997 Depdc5 protein_coding protein_coding MGP_129S1SvImJ_T0070998.1 MGP_129S1SvImJ_G0029439.1 mouse_genomes_project 5 31003731 31099629 + Depdc5 protein_coding processed_transcript MGP_129S1SvImJ_T0070999.1 MGP_129S1SvImJ_G0029439.1 mouse_genomes_project 5 31004053 31144605 + MGP_129S1SvImJ_P0070999 Depdc5 protein_coding protein_coding MGP_129S1SvImJ_T0071000.1 MGP_129S1SvImJ_G0029439.1 mouse_genomes_project 5 31004109 31007964 + MGP_129S1SvImJ_P0071000 Depdc5 protein_coding protein_coding MGP_129S1SvImJ_T0071001.1 MGP_129S1SvImJ_G0029439.1 mouse_genomes_project 5 31004541 31142253 + MGP_129S1SvImJ_P0071001 Depdc5 protein_coding protein_coding MGP_129S1SvImJ_T0071002.1 MGP_129S1SvImJ_G0029439.1 mouse_genomes_project 5 31046135 31061585 + MGP_129S1SvImJ_P0071002 Depdc5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071003.1 MGP_129S1SvImJ_G0029439.1 mouse_genomes_project 5 31067886 31142246 + MGP_129S1SvImJ_P0071003 Depdc5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071004.1 MGP_129S1SvImJ_G0029439.1 mouse_genomes_project 5 31067984 31142253 + MGP_129S1SvImJ_P0071004 Depdc5 protein_coding protein_coding MGP_129S1SvImJ_T0071005.1 MGP_129S1SvImJ_G0029439.1 mouse_genomes_project 5 31087561 31088775 + Depdc5 protein_coding retained_intron MGP_129S1SvImJ_T0071006.1 MGP_129S1SvImJ_G0029439.1 mouse_genomes_project 5 31087856 31108031 + MGP_129S1SvImJ_P0071006 Depdc5 protein_coding protein_coding MGP_129S1SvImJ_T0071007.1 MGP_129S1SvImJ_G0029439.1 mouse_genomes_project 5 31111017 31118146 + Depdc5 protein_coding retained_intron MGP_129S1SvImJ_T0070258.1 MGP_129S1SvImJ_G0029309.1 mouse_genomes_project 5 16674700 18217043 + MGP_129S1SvImJ_P0070258 Magi2 protein_coding protein_coding MGP_129S1SvImJ_T0070259.1 MGP_129S1SvImJ_G0029309.1 mouse_genomes_project 5 16674710 17252302 + Magi2 protein_coding processed_transcript MGP_129S1SvImJ_T0070260.1 MGP_129S1SvImJ_G0029309.1 mouse_genomes_project 5 16674715 18217027 + MGP_129S1SvImJ_P0070260 Magi2 protein_coding protein_coding MGP_129S1SvImJ_T0070261.1 MGP_129S1SvImJ_G0029309.1 mouse_genomes_project 5 16674719 18218897 + MGP_129S1SvImJ_P0070261 Magi2 protein_coding protein_coding MGP_129S1SvImJ_T0070262.1 MGP_129S1SvImJ_G0029309.1 mouse_genomes_project 5 16675061 16678143 + Magi2 protein_coding retained_intron MGP_129S1SvImJ_T0070263.1 MGP_129S1SvImJ_G0029309.1 mouse_genomes_project 5 17387038 18218916 + MGP_129S1SvImJ_P0070263 Magi2 protein_coding protein_coding MGP_129S1SvImJ_T0070264.1 MGP_129S1SvImJ_G0029309.1 mouse_genomes_project 5 17387241 18217049 + MGP_129S1SvImJ_P0070264 Magi2 protein_coding protein_coding MGP_129S1SvImJ_T0070265.1 MGP_129S1SvImJ_G0029309.1 mouse_genomes_project 5 17387457 17676626 + MGP_129S1SvImJ_P0070265 Magi2 protein_coding protein_coding MGP_129S1SvImJ_T0070266.1 MGP_129S1SvImJ_G0029309.1 mouse_genomes_project 5 17684090 17957865 + Magi2 protein_coding processed_transcript MGP_129S1SvImJ_T0070267.1 MGP_129S1SvImJ_G0029309.1 mouse_genomes_project 5 17712347 18161483 + Magi2 protein_coding retained_intron MGP_129S1SvImJ_T0070268.1 MGP_129S1SvImJ_G0029309.1 mouse_genomes_project 5 18028864 18103600 + Magi2 protein_coding processed_transcript MGP_129S1SvImJ_T0070269.1 MGP_129S1SvImJ_G0029309.1 mouse_genomes_project 5 18105286 18216477 + MGP_129S1SvImJ_P0070269 Magi2 protein_coding protein_coding MGP_129S1SvImJ_T0070270.1 MGP_129S1SvImJ_G0029309.1 mouse_genomes_project 5 18215792 18216927 + Magi2 protein_coding processed_transcript MGP_129S1SvImJ_T0072876.1 MGP_129S1SvImJ_G0029796.1 mouse_genomes_project 5 103342914 103405360 + MGP_129S1SvImJ_P0072876 Cds1 protein_coding protein_coding MGP_129S1SvImJ_T0072877.1 MGP_129S1SvImJ_G0029796.1 mouse_genomes_project 5 103387690 103402949 + Cds1 protein_coding retained_intron MGP_129S1SvImJ_T0008062.1 MGP_129S1SvImJ_G0006586.1 mouse_genomes_project 5 20114563 20124822 + lincRNA lincRNA MGP_129S1SvImJ_T0008063.1 MGP_129S1SvImJ_G0006586.1 mouse_genomes_project 5 20114570 20379462 + lincRNA lincRNA MGP_129S1SvImJ_T0008064.1 MGP_129S1SvImJ_G0006586.1 mouse_genomes_project 5 20118026 20124015 + lincRNA lincRNA MGP_129S1SvImJ_T0099921.1 MGP_129S1SvImJ_G0037988.1 mouse_genomes_project 5 65329903 65329977 + Gm24399 snRNA snRNA MGP_129S1SvImJ_T0008089.1 MGP_129S1SvImJ_G0006602.1 mouse_genomes_project 5 27852877 27860308 - Gm42450 lincRNA lincRNA MGP_129S1SvImJ_T0001626.1 MGP_129S1SvImJ_G0001543.1 mouse_genomes_project 5 57074536 57076714 + TEC TEC MGP_129S1SvImJ_T0008267.1 MGP_129S1SvImJ_G0006737.1 mouse_genomes_project 5 108464329 108540846 - Gm28050 lincRNA lincRNA MGP_129S1SvImJ_T0008268.1 MGP_129S1SvImJ_G0006737.1 mouse_genomes_project 5 108523935 108540849 - Gm28050 lincRNA lincRNA MGP_129S1SvImJ_T0014932.1 MGP_129S1SvImJ_G0013021.1 mouse_genomes_project 5 24185582 24187395 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001853.1 MGP_129S1SvImJ_G0001767.1 mouse_genomes_project 5 131243189 131244277 + TEC TEC MGP_129S1SvImJ_T0004666.1 MGP_129S1SvImJ_G0004045.1 mouse_genomes_project 5 22637916 22640310 + Prkag2os2 antisense antisense MGP_129S1SvImJ_T0015217.1 MGP_129S1SvImJ_G0013306.1 mouse_genomes_project 5 149431021 149431978 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010743.1 MGP_129S1SvImJ_G0008859.1 mouse_genomes_project 5 141025280 141025368 - Mir721 miRNA miRNA MGP_129S1SvImJ_T0074714.1 MGP_129S1SvImJ_G0030149.1 mouse_genomes_project 5 135075439 135538856 - MGP_129S1SvImJ_P0074714 Wbscr17 protein_coding protein_coding MGP_129S1SvImJ_T0074715.1 MGP_129S1SvImJ_G0030149.1 mouse_genomes_project 5 135177128 135538435 - MGP_129S1SvImJ_P0074715 Wbscr17 protein_coding protein_coding MGP_129S1SvImJ_T0074716.1 MGP_129S1SvImJ_G0030149.1 mouse_genomes_project 5 135301653 135537274 - Wbscr17 protein_coding retained_intron MGP_129S1SvImJ_T0074717.1 MGP_129S1SvImJ_G0030149.1 mouse_genomes_project 5 135367900 135538232 - Wbscr17 protein_coding retained_intron MGP_129S1SvImJ_T0074718.1 MGP_129S1SvImJ_G0030149.1 mouse_genomes_project 5 135537208 135538437 - Wbscr17 protein_coding processed_transcript MGP_129S1SvImJ_T0069987.1 MGP_129S1SvImJ_G0029261.1 mouse_genomes_project 5 468709 490414 + MGP_129S1SvImJ_P0069987 Tmbim7 protein_coding protein_coding MGP_129S1SvImJ_T0069988.1 MGP_129S1SvImJ_G0029261.1 mouse_genomes_project 5 474372 496632 + MGP_129S1SvImJ_P0069988 Tmbim7 protein_coding protein_coding MGP_129S1SvImJ_T0069989.1 MGP_129S1SvImJ_G0029261.1 mouse_genomes_project 5 474547 484489 + Tmbim7 protein_coding retained_intron MGP_129S1SvImJ_T0069990.1 MGP_129S1SvImJ_G0029261.1 mouse_genomes_project 5 474548 496760 + MGP_129S1SvImJ_P0069990 Tmbim7 protein_coding protein_coding MGP_129S1SvImJ_T0069991.1 MGP_129S1SvImJ_G0029261.1 mouse_genomes_project 5 479142 497541 + MGP_129S1SvImJ_P0069991 Tmbim7 protein_coding protein_coding MGP_129S1SvImJ_T0001806.1 MGP_129S1SvImJ_G0001721.1 mouse_genomes_project 5 120618245 120619201 + TEC TEC MGP_129S1SvImJ_T0018153.1 MGP_129S1SvImJ_G0015589.1 mouse_genomes_project 5 2023060 2025722 - Gm43623 processed_transcript processed_transcript MGP_129S1SvImJ_T0073446.1 MGP_129S1SvImJ_G0029922.1 mouse_genomes_project 5 116418140 116450491 - MGP_129S1SvImJ_P0073446 Sart3 protein_coding protein_coding MGP_129S1SvImJ_T0073447.1 MGP_129S1SvImJ_G0029922.1 mouse_genomes_project 5 116418142 116449660 - MGP_129S1SvImJ_P0073447 Sart3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073448.1 MGP_129S1SvImJ_G0029922.1 mouse_genomes_project 5 116420372 116421290 - Sart3 protein_coding retained_intron MGP_129S1SvImJ_T0073449.1 MGP_129S1SvImJ_G0029922.1 mouse_genomes_project 5 116421464 116431137 - Sart3 protein_coding processed_transcript MGP_129S1SvImJ_T0073450.1 MGP_129S1SvImJ_G0029922.1 mouse_genomes_project 5 116429928 116430452 - Sart3 protein_coding processed_transcript MGP_129S1SvImJ_T0073451.1 MGP_129S1SvImJ_G0029922.1 mouse_genomes_project 5 116430674 116433909 - Sart3 protein_coding retained_intron MGP_129S1SvImJ_T0073452.1 MGP_129S1SvImJ_G0029922.1 mouse_genomes_project 5 116431101 116438496 - Sart3 protein_coding processed_transcript MGP_129S1SvImJ_T0072403.1 MGP_129S1SvImJ_G0029679.1 mouse_genomes_project 5 88001927 88027443 - MGP_129S1SvImJ_P0072403 Ugt2b5 protein_coding protein_coding MGP_129S1SvImJ_T0010746.1 MGP_129S1SvImJ_G0008862.1 mouse_genomes_project 5 142028168 142028233 - Mir7036 miRNA miRNA MGP_129S1SvImJ_T0073037.1 MGP_129S1SvImJ_G0029835.1 mouse_genomes_project 5 109352911 109417397 + MGP_129S1SvImJ_P0073037 Brdt protein_coding protein_coding MGP_129S1SvImJ_T0073038.1 MGP_129S1SvImJ_G0029835.1 mouse_genomes_project 5 109352927 109372498 + MGP_129S1SvImJ_P0073038 Brdt protein_coding protein_coding MGP_129S1SvImJ_T0073039.1 MGP_129S1SvImJ_G0029835.1 mouse_genomes_project 5 109352944 109363832 + Brdt protein_coding processed_transcript MGP_129S1SvImJ_T0073040.1 MGP_129S1SvImJ_G0029835.1 mouse_genomes_project 5 109397201 109416646 + Brdt protein_coding processed_transcript MGP_129S1SvImJ_T0099948.1 MGP_129S1SvImJ_G0038015.1 mouse_genomes_project 5 102004015 102004175 - Gm23173 snRNA snRNA MGP_129S1SvImJ_T0001788.1 MGP_129S1SvImJ_G0001703.1 mouse_genomes_project 5 115806669 115807590 - TEC TEC MGP_129S1SvImJ_T0015228.1 MGP_129S1SvImJ_G0013317.1 mouse_genomes_project 5 151549946 151550147 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072368.1 MGP_129S1SvImJ_G0029666.1 mouse_genomes_project 5 87014981 87036139 - MGP_129S1SvImJ_P0072368 Gnrhr protein_coding protein_coding MGP_129S1SvImJ_T0072369.1 MGP_129S1SvImJ_G0029666.1 mouse_genomes_project 5 87016221 87036108 - MGP_129S1SvImJ_P0072369 Gnrhr protein_coding protein_coding MGP_129S1SvImJ_T0072370.1 MGP_129S1SvImJ_G0029666.1 mouse_genomes_project 5 87020454 87036084 - MGP_129S1SvImJ_P0072370 Gnrhr protein_coding protein_coding MGP_129S1SvImJ_T0004880.1 MGP_129S1SvImJ_G0004201.1 mouse_genomes_project 5 140726121 140727954 - Gm15701 antisense antisense MGP_129S1SvImJ_T0004741.1 MGP_129S1SvImJ_G0004105.1 mouse_genomes_project 5 77318639 77327792 + Hopxos antisense antisense MGP_129S1SvImJ_T0075788.1 MGP_129S1SvImJ_G0030354.1 mouse_genomes_project 5 150378042 150405668 - MGP_129S1SvImJ_P0075788 protein_coding protein_coding MGP_129S1SvImJ_T0075789.1 MGP_129S1SvImJ_G0030354.1 mouse_genomes_project 5 150378251 150404655 - MGP_129S1SvImJ_P0075789 protein_coding protein_coding MGP_129S1SvImJ_T0075790.1 MGP_129S1SvImJ_G0030354.1 mouse_genomes_project 5 150380213 150403072 - MGP_129S1SvImJ_P0075790 protein_coding protein_coding MGP_129S1SvImJ_T0075791.1 MGP_129S1SvImJ_G0030354.1 mouse_genomes_project 5 150388774 150399722 - protein_coding processed_transcript MGP_129S1SvImJ_T0075792.1 MGP_129S1SvImJ_G0030354.1 mouse_genomes_project 5 150396252 150404430 - MGP_129S1SvImJ_P0075792 protein_coding protein_coding MGP_129S1SvImJ_T0075793.1 MGP_129S1SvImJ_G0030354.1 mouse_genomes_project 5 150402320 150505518 - MGP_129S1SvImJ_P0075793 protein_coding protein_coding MGP_129S1SvImJ_T0004895.1 MGP_129S1SvImJ_G0004211.1 mouse_genomes_project 5 145146622 145153015 + Gm16121 antisense antisense MGP_129S1SvImJ_T0015036.1 MGP_129S1SvImJ_G0013125.1 mouse_genomes_project 5 67773491 67773994 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0074819.1 MGP_129S1SvImJ_G0030160.1 mouse_genomes_project 5 139018885 139042527 - MGP_129S1SvImJ_P0074819 Lat2 protein_coding protein_coding MGP_129S1SvImJ_T0074820.1 MGP_129S1SvImJ_G0030160.1 mouse_genomes_project 5 139018966 139042492 - MGP_129S1SvImJ_P0074820 Lat2 protein_coding protein_coding MGP_129S1SvImJ_T0074821.1 MGP_129S1SvImJ_G0030160.1 mouse_genomes_project 5 139019101 139029687 - MGP_129S1SvImJ_P0074821 Lat2 protein_coding protein_coding MGP_129S1SvImJ_T0074822.1 MGP_129S1SvImJ_G0030160.1 mouse_genomes_project 5 139019294 139026719 - MGP_129S1SvImJ_P0074822 Lat2 protein_coding protein_coding MGP_129S1SvImJ_T0074823.1 MGP_129S1SvImJ_G0030160.1 mouse_genomes_project 5 139019432 139026164 - Lat2 protein_coding processed_transcript MGP_129S1SvImJ_T0074824.1 MGP_129S1SvImJ_G0030160.1 mouse_genomes_project 5 139019661 139042508 - MGP_129S1SvImJ_P0074824 Lat2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074825.1 MGP_129S1SvImJ_G0030160.1 mouse_genomes_project 5 139019674 139024288 - Lat2 protein_coding retained_intron MGP_129S1SvImJ_T0074826.1 MGP_129S1SvImJ_G0030160.1 mouse_genomes_project 5 139025124 139042487 - Lat2 protein_coding processed_transcript MGP_129S1SvImJ_T0074827.1 MGP_129S1SvImJ_G0030160.1 mouse_genomes_project 5 139026293 139042468 - MGP_129S1SvImJ_P0074827 Lat2 protein_coding protein_coding MGP_129S1SvImJ_T0074828.1 MGP_129S1SvImJ_G0030160.1 mouse_genomes_project 5 139026398 139028522 - Lat2 protein_coding retained_intron MGP_129S1SvImJ_T0008295.1 MGP_129S1SvImJ_G0006753.1 mouse_genomes_project 5 114255664 114286117 - E130006D01Rik lincRNA lincRNA MGP_129S1SvImJ_T0008296.1 MGP_129S1SvImJ_G0006753.1 mouse_genomes_project 5 114255683 114286139 - E130006D01Rik lincRNA lincRNA MGP_129S1SvImJ_T0008297.1 MGP_129S1SvImJ_G0006753.1 mouse_genomes_project 5 114255790 114286114 - E130006D01Rik lincRNA lincRNA MGP_129S1SvImJ_T0004787.1 MGP_129S1SvImJ_G0004135.1 mouse_genomes_project 5 112596426 112597062 - Gm43136 antisense antisense MGP_129S1SvImJ_T0008131.1 MGP_129S1SvImJ_G0006629.1 mouse_genomes_project 5 42443828 42444867 - Gm42555 lincRNA lincRNA MGP_129S1SvImJ_T0015012.1 MGP_129S1SvImJ_G0013101.1 mouse_genomes_project 5 59452974 59453408 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072408.1 MGP_129S1SvImJ_G0029684.1 mouse_genomes_project 5 88382888 88407271 - MGP_129S1SvImJ_P0072408 Ugt2a2 protein_coding protein_coding MGP_129S1SvImJ_T0072410.1 MGP_129S1SvImJ_G0029684.1 mouse_genomes_project 5 88383758 88407273 - MGP_129S1SvImJ_P0072410 Ugt2a2 protein_coding protein_coding MGP_129S1SvImJ_T0015178.1 MGP_129S1SvImJ_G0013267.1 mouse_genomes_project 5 129716664 129717453 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015059.1 MGP_129S1SvImJ_G0013148.1 mouse_genomes_project 5 77595957 77596240 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0074350.1 MGP_129S1SvImJ_G0030081.1 mouse_genomes_project 5 127639801 127643087 - MGP_129S1SvImJ_P0074350 Hcar1 protein_coding protein_coding MGP_129S1SvImJ_T0008230.1 MGP_129S1SvImJ_G0006711.1 mouse_genomes_project 5 100663564 100668761 + Gm43252 lincRNA lincRNA MGP_129S1SvImJ_T0070964.1 MGP_129S1SvImJ_G0029433.1 mouse_genomes_project 5 30200338 30224113 + MGP_129S1SvImJ_P0070964 Fosl2 protein_coding protein_coding MGP_129S1SvImJ_T0070965.1 MGP_129S1SvImJ_G0029433.1 mouse_genomes_project 5 30200710 30205923 + Fosl2 protein_coding retained_intron MGP_129S1SvImJ_T0070966.1 MGP_129S1SvImJ_G0029433.1 mouse_genomes_project 5 30212793 30219984 + Fosl2 protein_coding retained_intron MGP_129S1SvImJ_T0010727.1 MGP_129S1SvImJ_G0008843.1 mouse_genomes_project 5 118486167 118486228 + Mir7029 miRNA miRNA MGP_129S1SvImJ_T0101183.1 MGP_129S1SvImJ_G0039250.1 mouse_genomes_project 5 51960834 51960946 - Gm23532 snoRNA snoRNA MGP_129S1SvImJ_T0001673.1 MGP_129S1SvImJ_G0001589.1 mouse_genomes_project 5 66165453 66167663 - TEC TEC MGP_129S1SvImJ_T0008194.1 MGP_129S1SvImJ_G0006681.1 mouse_genomes_project 5 77366904 77368686 - Gm42757 lincRNA lincRNA MGP_129S1SvImJ_T0011853.1 MGP_129S1SvImJ_G0009946.1 mouse_genomes_project 5 124230643 124232594 + Oas1b polymorphic_pseudogene processed_transcript MGP_129S1SvImJ_T0011854.1 MGP_129S1SvImJ_G0009946.1 mouse_genomes_project 5 124230646 124242173 + MGP_129S1SvImJ_P0011854 Oas1b polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0073932.1 MGP_129S1SvImJ_G0009946.1 mouse_genomes_project 5 124230865 124242178 + MGP_129S1SvImJ_P0073932 Oas1b polymorphic_pseudogene unknown_likely_coding MGP_129S1SvImJ_T0015239.1 MGP_129S1SvImJ_G0013328.1 mouse_genomes_project 5 154361907 154362085 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075114.1 MGP_129S1SvImJ_G0030215.1 mouse_genomes_project 5 141754863 141765966 - MGP_129S1SvImJ_P0075114 Ap1s1 protein_coding protein_coding MGP_129S1SvImJ_T0075115.1 MGP_129S1SvImJ_G0030215.1 mouse_genomes_project 5 141755212 141757522 - Ap1s1 protein_coding retained_intron MGP_129S1SvImJ_T0075116.1 MGP_129S1SvImJ_G0030215.1 mouse_genomes_project 5 141757250 141765626 - MGP_129S1SvImJ_P0075116 Ap1s1 protein_coding protein_coding MGP_129S1SvImJ_T0075117.1 MGP_129S1SvImJ_G0030215.1 mouse_genomes_project 5 141757267 141765873 - MGP_129S1SvImJ_P0075117 Ap1s1 protein_coding protein_coding MGP_129S1SvImJ_T0075118.1 MGP_129S1SvImJ_G0030215.1 mouse_genomes_project 5 141762898 141765238 - MGP_129S1SvImJ_P0075118 Ap1s1 protein_coding protein_coding MGP_129S1SvImJ_T0074364.1 MGP_129S1SvImJ_G0030085.1 mouse_genomes_project 5 127749040 127782664 + MGP_129S1SvImJ_P0074364 Hip1r protein_coding protein_coding MGP_129S1SvImJ_T0074365.1 MGP_129S1SvImJ_G0030085.1 mouse_genomes_project 5 127757396 127767147 + MGP_129S1SvImJ_P0074365 Hip1r protein_coding protein_coding MGP_129S1SvImJ_T0074366.1 MGP_129S1SvImJ_G0030085.1 mouse_genomes_project 5 127771982 127774505 + MGP_129S1SvImJ_P0074366 Hip1r protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074367.1 MGP_129S1SvImJ_G0030085.1 mouse_genomes_project 5 127776515 127778113 + Hip1r protein_coding retained_intron MGP_129S1SvImJ_T0074368.1 MGP_129S1SvImJ_G0030085.1 mouse_genomes_project 5 127776891 127778768 + MGP_129S1SvImJ_P0074368 Hip1r protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074369.1 MGP_129S1SvImJ_G0030085.1 mouse_genomes_project 5 127777488 127778794 + Hip1r protein_coding retained_intron MGP_129S1SvImJ_T0074370.1 MGP_129S1SvImJ_G0030085.1 mouse_genomes_project 5 127777704 127778780 + Hip1r protein_coding retained_intron MGP_129S1SvImJ_T0070967.1 MGP_129S1SvImJ_G0029434.1 mouse_genomes_project 5 30303933 30413714 + Plb1 protein_coding retained_intron MGP_129S1SvImJ_T0070968.1 MGP_129S1SvImJ_G0029434.1 mouse_genomes_project 5 30303935 30306831 + Plb1 protein_coding retained_intron MGP_129S1SvImJ_T0070969.1 MGP_129S1SvImJ_G0029434.1 mouse_genomes_project 5 30303935 30322819 + Plb1 protein_coding processed_transcript MGP_129S1SvImJ_T0070970.1 MGP_129S1SvImJ_G0029434.1 mouse_genomes_project 5 30303939 30449236 + MGP_129S1SvImJ_P0070970 Plb1 protein_coding protein_coding MGP_129S1SvImJ_T0070971.1 MGP_129S1SvImJ_G0029434.1 mouse_genomes_project 5 30303973 30368836 + Plb1 protein_coding retained_intron MGP_129S1SvImJ_T0070972.1 MGP_129S1SvImJ_G0029434.1 mouse_genomes_project 5 30311757 30405691 + MGP_129S1SvImJ_P0070972 Plb1 protein_coding protein_coding MGP_129S1SvImJ_T0070973.1 MGP_129S1SvImJ_G0029434.1 mouse_genomes_project 5 30320028 30449238 + MGP_129S1SvImJ_P0070973 Plb1 protein_coding protein_coding MGP_129S1SvImJ_T0070974.1 MGP_129S1SvImJ_G0029434.1 mouse_genomes_project 5 30436957 30451402 + Plb1 protein_coding processed_transcript MGP_129S1SvImJ_T0070975.1 MGP_129S1SvImJ_G0029434.1 mouse_genomes_project 5 30438082 30449231 + Plb1 protein_coding processed_transcript MGP_129S1SvImJ_T0001589.1 MGP_129S1SvImJ_G0001506.1 mouse_genomes_project 5 47840364 47842908 - TEC TEC MGP_129S1SvImJ_T0008425.1 MGP_129S1SvImJ_G0006834.1 mouse_genomes_project 5 141901370 141921022 - lincRNA lincRNA MGP_129S1SvImJ_T0073949.1 MGP_129S1SvImJ_G0030023.1 mouse_genomes_project 5 124665006 124669775 + MGP_129S1SvImJ_P0073949 protein_coding protein_coding MGP_129S1SvImJ_T0073950.1 MGP_129S1SvImJ_G0030023.1 mouse_genomes_project 5 124665071 124665785 + protein_coding retained_intron MGP_129S1SvImJ_T0073951.1 MGP_129S1SvImJ_G0030023.1 mouse_genomes_project 5 124667171 124667918 + protein_coding retained_intron MGP_129S1SvImJ_T0073952.1 MGP_129S1SvImJ_G0030023.1 mouse_genomes_project 5 124667257 124669499 + MGP_129S1SvImJ_P0073952 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073953.1 MGP_129S1SvImJ_G0030023.1 mouse_genomes_project 5 124667610 124669089 + protein_coding retained_intron MGP_129S1SvImJ_T0073954.1 MGP_129S1SvImJ_G0030023.1 mouse_genomes_project 5 124668729 124669500 + protein_coding retained_intron MGP_129S1SvImJ_T0071633.1 MGP_129S1SvImJ_G0029541.1 mouse_genomes_project 5 48834795 48937597 - MGP_129S1SvImJ_P0071633 Adgra3 protein_coding protein_coding MGP_129S1SvImJ_T0071634.1 MGP_129S1SvImJ_G0029541.1 mouse_genomes_project 5 48840949 48846915 - Adgra3 protein_coding processed_transcript MGP_129S1SvImJ_T0071635.1 MGP_129S1SvImJ_G0029541.1 mouse_genomes_project 5 48865191 48878973 - Adgra3 protein_coding processed_transcript MGP_129S1SvImJ_T0071636.1 MGP_129S1SvImJ_G0029541.1 mouse_genomes_project 5 48885184 48890152 - Adgra3 protein_coding retained_intron MGP_129S1SvImJ_T0071637.1 MGP_129S1SvImJ_G0029541.1 mouse_genomes_project 5 48928980 48931971 - Adgra3 protein_coding retained_intron MGP_129S1SvImJ_T0071638.1 MGP_129S1SvImJ_G0029541.1 mouse_genomes_project 5 48929460 48937236 - Adgra3 protein_coding processed_transcript MGP_129S1SvImJ_T0071639.1 MGP_129S1SvImJ_G0029541.1 mouse_genomes_project 5 48936714 48937236 - Adgra3 protein_coding retained_intron MGP_129S1SvImJ_T0073764.1 MGP_129S1SvImJ_G0029978.1 mouse_genomes_project 5 118948578 118959307 - MGP_129S1SvImJ_P0073764 Prkab1 protein_coding protein_coding MGP_129S1SvImJ_T0073765.1 MGP_129S1SvImJ_G0029978.1 mouse_genomes_project 5 118948582 118959353 - MGP_129S1SvImJ_P0073765 Prkab1 protein_coding protein_coding MGP_129S1SvImJ_T0073766.1 MGP_129S1SvImJ_G0029978.1 mouse_genomes_project 5 118949159 118950154 - Prkab1 protein_coding retained_intron MGP_129S1SvImJ_T0073767.1 MGP_129S1SvImJ_G0029978.1 mouse_genomes_project 5 118949308 118953054 - Prkab1 protein_coding retained_intron MGP_129S1SvImJ_T0073768.1 MGP_129S1SvImJ_G0029978.1 mouse_genomes_project 5 118949427 118959201 - MGP_129S1SvImJ_P0073768 Prkab1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073769.1 MGP_129S1SvImJ_G0029978.1 mouse_genomes_project 5 118949642 118959296 - MGP_129S1SvImJ_P0073769 Prkab1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073770.1 MGP_129S1SvImJ_G0029978.1 mouse_genomes_project 5 118952657 118959242 - Prkab1 protein_coding retained_intron MGP_129S1SvImJ_T0073771.1 MGP_129S1SvImJ_G0029978.1 mouse_genomes_project 5 118954550 118956490 - Prkab1 protein_coding retained_intron MGP_129S1SvImJ_T0073772.1 MGP_129S1SvImJ_G0029978.1 mouse_genomes_project 5 118958742 118959304 - Prkab1 protein_coding retained_intron MGP_129S1SvImJ_T0075230.1 MGP_129S1SvImJ_G0030236.1 mouse_genomes_project 5 142406282 142418227 + MGP_129S1SvImJ_P0075230 protein_coding protein_coding MGP_129S1SvImJ_T0075231.1 MGP_129S1SvImJ_G0030236.1 mouse_genomes_project 5 142406304 142413957 + protein_coding retained_intron MGP_129S1SvImJ_T0075232.1 MGP_129S1SvImJ_G0030236.1 mouse_genomes_project 5 142406313 142414772 + MGP_129S1SvImJ_P0075232 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075234.1 MGP_129S1SvImJ_G0030236.1 mouse_genomes_project 5 142406339 142418232 + MGP_129S1SvImJ_P0075234 protein_coding protein_coding MGP_129S1SvImJ_T0075235.1 MGP_129S1SvImJ_G0030236.1 mouse_genomes_project 5 142406339 142411057 + MGP_129S1SvImJ_P0075235 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075236.1 MGP_129S1SvImJ_G0030236.1 mouse_genomes_project 5 142407291 142417326 + MGP_129S1SvImJ_P0075236 protein_coding protein_coding MGP_129S1SvImJ_T0075237.1 MGP_129S1SvImJ_G0030236.1 mouse_genomes_project 5 142415477 142416509 + MGP_129S1SvImJ_P0075237 protein_coding protein_coding MGP_129S1SvImJ_T0075238.1 MGP_129S1SvImJ_G0030236.1 mouse_genomes_project 5 142416511 142417385 + MGP_129S1SvImJ_P0075238 protein_coding protein_coding MGP_129S1SvImJ_T0075823.1 MGP_129S1SvImJ_G0030359.1 mouse_genomes_project 5 150572441 150593492 - MGP_129S1SvImJ_P0075823 Ptcd1 protein_coding protein_coding MGP_129S1SvImJ_T0075824.1 MGP_129S1SvImJ_G0030359.1 mouse_genomes_project 5 150591835 150593340 - MGP_129S1SvImJ_P0075824 Ptcd1 protein_coding protein_coding MGP_129S1SvImJ_T0004864.1 MGP_129S1SvImJ_G0004188.1 mouse_genomes_project 5 132797384 132805650 + Gm42875 antisense antisense MGP_129S1SvImJ_T0008357.1 MGP_129S1SvImJ_G0006795.1 mouse_genomes_project 5 123266879 123271026 + Gm43277 lincRNA lincRNA MGP_129S1SvImJ_T0008101.1 MGP_129S1SvImJ_G0006611.1 mouse_genomes_project 5 33631831 33637636 + 4930478P22Rik lincRNA lincRNA MGP_129S1SvImJ_T0008102.1 MGP_129S1SvImJ_G0006611.1 mouse_genomes_project 5 33631843 33637872 + 4930478P22Rik lincRNA lincRNA MGP_129S1SvImJ_T0008103.1 MGP_129S1SvImJ_G0006611.1 mouse_genomes_project 5 33631849 33637098 + 4930478P22Rik lincRNA lincRNA MGP_129S1SvImJ_T0001709.1 MGP_129S1SvImJ_G0001624.1 mouse_genomes_project 5 73304806 73305799 + TEC TEC MGP_129S1SvImJ_T0099932.1 MGP_129S1SvImJ_G0037999.1 mouse_genomes_project 5 80230346 80230495 - Gm23429 snRNA snRNA MGP_129S1SvImJ_T0001651.1 MGP_129S1SvImJ_G0001567.1 mouse_genomes_project 5 65045219 65047596 - TEC TEC MGP_129S1SvImJ_T0010702.1 MGP_129S1SvImJ_G0008818.1 mouse_genomes_project 5 64238095 64238212 - Gm25306 miRNA miRNA MGP_129S1SvImJ_T0008223.1 MGP_129S1SvImJ_G0006707.1 mouse_genomes_project 5 98614158 98637342 + Gm33969 lincRNA lincRNA MGP_129S1SvImJ_T0099977.1 MGP_129S1SvImJ_G0038044.1 mouse_genomes_project 5 149325010 149325114 + Gm24311 snRNA snRNA MGP_129S1SvImJ_T0008231.1 MGP_129S1SvImJ_G0006712.1 mouse_genomes_project 5 100905323 100907972 + Gm43253 lincRNA lincRNA MGP_129S1SvImJ_T0073025.1 MGP_129S1SvImJ_G0029833.1 mouse_genomes_project 5 108949948 108970001 + MGP_129S1SvImJ_P0073025 Cdc7 protein_coding protein_coding MGP_129S1SvImJ_T0073026.1 MGP_129S1SvImJ_G0029833.1 mouse_genomes_project 5 108949948 108970002 + MGP_129S1SvImJ_P0073026 Cdc7 protein_coding protein_coding MGP_129S1SvImJ_T0073027.1 MGP_129S1SvImJ_G0029833.1 mouse_genomes_project 5 108950007 108970002 + MGP_129S1SvImJ_P0073027 Cdc7 protein_coding protein_coding MGP_129S1SvImJ_T0073028.1 MGP_129S1SvImJ_G0029833.1 mouse_genomes_project 5 108950018 108970002 + Cdc7 protein_coding retained_intron MGP_129S1SvImJ_T0073029.1 MGP_129S1SvImJ_G0029833.1 mouse_genomes_project 5 108950187 108970001 + MGP_129S1SvImJ_P0073029 Cdc7 protein_coding protein_coding MGP_129S1SvImJ_T0073030.1 MGP_129S1SvImJ_G0029833.1 mouse_genomes_project 5 108950644 108968925 + MGP_129S1SvImJ_P0073030 Cdc7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073031.1 MGP_129S1SvImJ_G0029833.1 mouse_genomes_project 5 108960182 108960829 + Cdc7 protein_coding processed_transcript MGP_129S1SvImJ_T0073032.1 MGP_129S1SvImJ_G0029833.1 mouse_genomes_project 5 108960874 108964921 + Cdc7 protein_coding retained_intron MGP_129S1SvImJ_T0010751.1 MGP_129S1SvImJ_G0008867.1 mouse_genomes_project 5 143520703 143520786 + Gm24082 miRNA miRNA MGP_129S1SvImJ_T0014941.1 MGP_129S1SvImJ_G0013030.1 mouse_genomes_project 5 27474694 27475051 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072962.1 MGP_129S1SvImJ_G0029819.1 mouse_genomes_project 5 106781800 106931403 - MGP_129S1SvImJ_P0072962 Gbp9 protein_coding protein_coding MGP_129S1SvImJ_T0072963.1 MGP_129S1SvImJ_G0029819.1 mouse_genomes_project 5 106781801 106931403 - Gbp9 protein_coding retained_intron MGP_129S1SvImJ_T0072967.1 MGP_129S1SvImJ_G0029819.1 mouse_genomes_project 5 106871456 106901571 - MGP_129S1SvImJ_P0072967 Gbp9 protein_coding protein_coding MGP_129S1SvImJ_T0076068.1 MGP_129S1SvImJ_G0030410.1 mouse_genomes_project 5 156462957 156470413 + Brca2 protein_coding retained_intron MGP_129S1SvImJ_T0076069.1 MGP_129S1SvImJ_G0030410.1 mouse_genomes_project 5 156462957 156512866 + MGP_129S1SvImJ_P0076069 Brca2 protein_coding protein_coding MGP_129S1SvImJ_T0076070.1 MGP_129S1SvImJ_G0030410.1 mouse_genomes_project 5 156462959 156478794 + Brca2 protein_coding retained_intron MGP_129S1SvImJ_T0076071.1 MGP_129S1SvImJ_G0030410.1 mouse_genomes_project 5 156462959 156481566 + MGP_129S1SvImJ_P0076071 Brca2 protein_coding protein_coding MGP_129S1SvImJ_T0076072.1 MGP_129S1SvImJ_G0030410.1 mouse_genomes_project 5 156462971 156512867 + MGP_129S1SvImJ_P0076072 Brca2 protein_coding protein_coding MGP_129S1SvImJ_T0076073.1 MGP_129S1SvImJ_G0030410.1 mouse_genomes_project 5 156463017 156467256 + Brca2 protein_coding processed_transcript MGP_129S1SvImJ_T0076074.1 MGP_129S1SvImJ_G0030410.1 mouse_genomes_project 5 156469757 156472975 + Brca2 protein_coding processed_transcript MGP_129S1SvImJ_T0076075.1 MGP_129S1SvImJ_G0030410.1 mouse_genomes_project 5 156493798 156496033 + Brca2 protein_coding retained_intron MGP_129S1SvImJ_T0076076.1 MGP_129S1SvImJ_G0030410.1 mouse_genomes_project 5 156495308 156499481 + Brca2 protein_coding retained_intron MGP_129S1SvImJ_T0076077.1 MGP_129S1SvImJ_G0030410.1 mouse_genomes_project 5 156499551 156502666 + Brca2 protein_coding retained_intron MGP_129S1SvImJ_T0076078.1 MGP_129S1SvImJ_G0030410.1 mouse_genomes_project 5 156509067 156512866 + Brca2 protein_coding processed_transcript MGP_129S1SvImJ_T0076079.1 MGP_129S1SvImJ_G0030410.1 mouse_genomes_project 5 156509348 156512452 + Brca2 protein_coding retained_intron MGP_129S1SvImJ_T0076080.1 MGP_129S1SvImJ_G0030410.1 mouse_genomes_project 5 156511114 156513449 + Brca2 protein_coding retained_intron MGP_129S1SvImJ_T0008166.1 MGP_129S1SvImJ_G0006659.1 mouse_genomes_project 5 64290053 64293114 - Gm26761 lincRNA lincRNA MGP_129S1SvImJ_T0072193.1 MGP_129S1SvImJ_G0029638.1 mouse_genomes_project 5 75722457 75806511 + MGP_129S1SvImJ_P0072193 Kit protein_coding protein_coding MGP_129S1SvImJ_T0072194.1 MGP_129S1SvImJ_G0029638.1 mouse_genomes_project 5 75722496 75806511 + MGP_129S1SvImJ_P0072194 Kit protein_coding protein_coding MGP_129S1SvImJ_T0072195.1 MGP_129S1SvImJ_G0029638.1 mouse_genomes_project 5 75763341 75773733 + Kit protein_coding retained_intron MGP_129S1SvImJ_T0072196.1 MGP_129S1SvImJ_G0029638.1 mouse_genomes_project 5 75789919 75791830 + Kit protein_coding retained_intron MGP_129S1SvImJ_T0072197.1 MGP_129S1SvImJ_G0029638.1 mouse_genomes_project 5 75793854 75795796 + Kit protein_coding retained_intron MGP_129S1SvImJ_T0072198.1 MGP_129S1SvImJ_G0029638.1 mouse_genomes_project 5 75795504 75802645 + Kit protein_coding retained_intron MGP_129S1SvImJ_T0072199.1 MGP_129S1SvImJ_G0029638.1 mouse_genomes_project 5 75798883 75806483 + Kit protein_coding retained_intron MGP_129S1SvImJ_T0072200.1 MGP_129S1SvImJ_G0029638.1 mouse_genomes_project 5 75798982 75802080 + Kit protein_coding retained_intron MGP_129S1SvImJ_T0071357.1 MGP_129S1SvImJ_G0029496.1 mouse_genomes_project 5 35199502 35288770 + MGP_129S1SvImJ_P0071357 Ppp2r2c protein_coding protein_coding MGP_129S1SvImJ_T0071358.1 MGP_129S1SvImJ_G0029496.1 mouse_genomes_project 5 35199652 35263832 + MGP_129S1SvImJ_P0071358 Ppp2r2c protein_coding protein_coding MGP_129S1SvImJ_T0071359.1 MGP_129S1SvImJ_G0029496.1 mouse_genomes_project 5 35273125 35273883 + Ppp2r2c protein_coding processed_transcript MGP_129S1SvImJ_T0071472.1 MGP_129S1SvImJ_G0029514.1 mouse_genomes_project 5 37095485 37114115 - MGP_129S1SvImJ_P0071472 Zfp518b protein_coding protein_coding MGP_129S1SvImJ_T0071473.1 MGP_129S1SvImJ_G0029514.1 mouse_genomes_project 5 37095487 37114039 - MGP_129S1SvImJ_P0071473 Zfp518b protein_coding protein_coding MGP_129S1SvImJ_T0071474.1 MGP_129S1SvImJ_G0029514.1 mouse_genomes_project 5 37101177 37114115 - MGP_129S1SvImJ_P0071474 Zfp518b protein_coding protein_coding MGP_129S1SvImJ_T0071475.1 MGP_129S1SvImJ_G0029514.1 mouse_genomes_project 5 37101628 37114046 - MGP_129S1SvImJ_P0071475 Zfp518b protein_coding protein_coding MGP_129S1SvImJ_T0015175.1 MGP_129S1SvImJ_G0013264.1 mouse_genomes_project 5 127205689 127206067 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075861.1 MGP_129S1SvImJ_G0030371.1 mouse_genomes_project 5 151307742 151351557 - MGP_129S1SvImJ_P0075861 protein_coding protein_coding MGP_129S1SvImJ_T0004800.1 MGP_129S1SvImJ_G0004144.1 mouse_genomes_project 5 116316476 116317196 + Gm15736 antisense antisense MGP_129S1SvImJ_T0075006.1 MGP_129S1SvImJ_G0030197.1 mouse_genomes_project 5 140648429 140656369 + MGP_129S1SvImJ_P0075006 Upk3b protein_coding protein_coding MGP_129S1SvImJ_T0075719.1 MGP_129S1SvImJ_G0030340.1 mouse_genomes_project 5 149212231 149238025 + Pms2 protein_coding retained_intron MGP_129S1SvImJ_T0075720.1 MGP_129S1SvImJ_G0030340.1 mouse_genomes_project 5 149212231 149238025 + Pms2 protein_coding processed_transcript MGP_129S1SvImJ_T0075721.1 MGP_129S1SvImJ_G0030340.1 mouse_genomes_project 5 149212231 149238025 + MGP_129S1SvImJ_P0075721 Pms2 protein_coding protein_coding MGP_129S1SvImJ_T0075722.1 MGP_129S1SvImJ_G0030340.1 mouse_genomes_project 5 149212257 149235289 + Pms2 protein_coding processed_transcript MGP_129S1SvImJ_T0075723.1 MGP_129S1SvImJ_G0030340.1 mouse_genomes_project 5 149212257 149235527 + Pms2 protein_coding processed_transcript MGP_129S1SvImJ_T0075724.1 MGP_129S1SvImJ_G0030340.1 mouse_genomes_project 5 149212266 149221516 + Pms2 protein_coding processed_transcript MGP_129S1SvImJ_T0075725.1 MGP_129S1SvImJ_G0030340.1 mouse_genomes_project 5 149212271 149218615 + Pms2 protein_coding processed_transcript MGP_129S1SvImJ_T0075726.1 MGP_129S1SvImJ_G0030340.1 mouse_genomes_project 5 149212292 149230709 + Pms2 protein_coding retained_intron MGP_129S1SvImJ_T0075727.1 MGP_129S1SvImJ_G0030340.1 mouse_genomes_project 5 149212292 149218153 + Pms2 protein_coding retained_intron MGP_129S1SvImJ_T0075728.1 MGP_129S1SvImJ_G0030340.1 mouse_genomes_project 5 149212324 149235243 + MGP_129S1SvImJ_P0075728 Pms2 protein_coding protein_coding MGP_129S1SvImJ_T0075729.1 MGP_129S1SvImJ_G0030340.1 mouse_genomes_project 5 149212428 149217321 + Pms2 protein_coding processed_transcript MGP_129S1SvImJ_T0075730.1 MGP_129S1SvImJ_G0030340.1 mouse_genomes_project 5 149217178 149217774 + Pms2 protein_coding retained_intron MGP_129S1SvImJ_T0075731.1 MGP_129S1SvImJ_G0030340.1 mouse_genomes_project 5 149223436 149229307 + MGP_129S1SvImJ_P0075731 Pms2 protein_coding protein_coding MGP_129S1SvImJ_T0010693.1 MGP_129S1SvImJ_G0008809.1 mouse_genomes_project 5 32982337 32982457 - Mir467g miRNA miRNA MGP_129S1SvImJ_T0075295.1 MGP_129S1SvImJ_G0030251.1 mouse_genomes_project 5 142770600 142779318 + MGP_129S1SvImJ_P0075295 Azgp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075296.1 MGP_129S1SvImJ_G0030251.1 mouse_genomes_project 5 142770619 142779318 + MGP_129S1SvImJ_P0075296 Azgp1 protein_coding protein_coding MGP_129S1SvImJ_T0075297.1 MGP_129S1SvImJ_G0030251.1 mouse_genomes_project 5 142770648 142774761 + Azgp1 protein_coding retained_intron MGP_129S1SvImJ_T0001534.1 MGP_129S1SvImJ_G0001452.1 mouse_genomes_project 5 35241104 35241254 + TEC TEC MGP_129S1SvImJ_T0001607.1 MGP_129S1SvImJ_G0001524.1 mouse_genomes_project 5 50431661 50433595 + TEC TEC MGP_129S1SvImJ_T0001594.1 MGP_129S1SvImJ_G0001511.1 mouse_genomes_project 5 47913483 47914115 - TEC TEC MGP_129S1SvImJ_T0070738.1 MGP_129S1SvImJ_G0029401.1 mouse_genomes_project 5 28880227 28890042 + MGP_129S1SvImJ_P0070738 Khk protein_coding protein_coding MGP_129S1SvImJ_T0070739.1 MGP_129S1SvImJ_G0029401.1 mouse_genomes_project 5 28880384 28889840 + MGP_129S1SvImJ_P0070739 Khk protein_coding protein_coding MGP_129S1SvImJ_T0070740.1 MGP_129S1SvImJ_G0029401.1 mouse_genomes_project 5 28880627 28889983 + MGP_129S1SvImJ_P0070740 Khk protein_coding protein_coding MGP_129S1SvImJ_T0070741.1 MGP_129S1SvImJ_G0029401.1 mouse_genomes_project 5 28880652 28889587 + MGP_129S1SvImJ_P0070741 Khk protein_coding protein_coding MGP_129S1SvImJ_T0070742.1 MGP_129S1SvImJ_G0029401.1 mouse_genomes_project 5 28889407 28890039 + Khk protein_coding retained_intron MGP_129S1SvImJ_T0004679.1 MGP_129S1SvImJ_G0004055.1 mouse_genomes_project 5 30603772 30672418 - antisense antisense MGP_129S1SvImJ_T0008218.1 MGP_129S1SvImJ_G0006702.1 mouse_genomes_project 5 98169863 98188177 - Gm33370 lincRNA lincRNA MGP_129S1SvImJ_T0098973.1 MGP_129S1SvImJ_G0037050.1 mouse_genomes_project 5 149609529 149612929 + Gm15708 sense_intronic sense_intronic MGP_129S1SvImJ_T0098974.1 MGP_129S1SvImJ_G0037050.1 mouse_genomes_project 5 149611290 149612897 + Gm15708 sense_intronic sense_intronic MGP_129S1SvImJ_T0073352.1 MGP_129S1SvImJ_G0029901.1 mouse_genomes_project 5 114828811 114842848 + MGP_129S1SvImJ_P0073352 Crybb1 protein_coding protein_coding MGP_129S1SvImJ_T0073353.1 MGP_129S1SvImJ_G0029901.1 mouse_genomes_project 5 114828841 114842720 + MGP_129S1SvImJ_P0073353 Crybb1 protein_coding protein_coding MGP_129S1SvImJ_T0073354.1 MGP_129S1SvImJ_G0029901.1 mouse_genomes_project 5 114828870 114842765 + MGP_129S1SvImJ_P0073354 Crybb1 protein_coding protein_coding MGP_129S1SvImJ_T0008188.1 MGP_129S1SvImJ_G0006676.1 mouse_genomes_project 5 76013300 76017017 - Gm28865 lincRNA lincRNA MGP_129S1SvImJ_T0070452.1 MGP_129S1SvImJ_G0029344.1 mouse_genomes_project 5 22166106 22172860 - MGP_129S1SvImJ_P0070452 Fastk protein_coding protein_coding MGP_129S1SvImJ_T0070453.1 MGP_129S1SvImJ_G0029344.1 mouse_genomes_project 5 22166107 22172852 - Fastk protein_coding retained_intron MGP_129S1SvImJ_T0070455.1 MGP_129S1SvImJ_G0029344.1 mouse_genomes_project 5 22168705 22169882 - Fastk protein_coding retained_intron MGP_129S1SvImJ_T0070456.1 MGP_129S1SvImJ_G0029344.1 mouse_genomes_project 5 22168705 22172953 - MGP_129S1SvImJ_P0070456 Fastk protein_coding protein_coding MGP_129S1SvImJ_T0070457.1 MGP_129S1SvImJ_G0029344.1 mouse_genomes_project 5 22168705 22172872 - MGP_129S1SvImJ_P0070457 Fastk protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070458.1 MGP_129S1SvImJ_G0029344.1 mouse_genomes_project 5 22168706 22172853 - Fastk protein_coding retained_intron MGP_129S1SvImJ_T0070459.1 MGP_129S1SvImJ_G0029344.1 mouse_genomes_project 5 22168706 22169191 - Fastk protein_coding retained_intron MGP_129S1SvImJ_T0070460.1 MGP_129S1SvImJ_G0029344.1 mouse_genomes_project 5 22168709 22172874 - MGP_129S1SvImJ_P0070460 Fastk protein_coding protein_coding MGP_129S1SvImJ_T0070461.1 MGP_129S1SvImJ_G0029344.1 mouse_genomes_project 5 22169194 22169768 - Fastk protein_coding retained_intron MGP_129S1SvImJ_T0070462.1 MGP_129S1SvImJ_G0029344.1 mouse_genomes_project 5 22169286 22169965 - Fastk protein_coding processed_transcript MGP_129S1SvImJ_T0070463.1 MGP_129S1SvImJ_G0029344.1 mouse_genomes_project 5 22169590 22171625 - Fastk protein_coding retained_intron MGP_129S1SvImJ_T0070464.1 MGP_129S1SvImJ_G0029344.1 mouse_genomes_project 5 22169737 22172904 - Fastk protein_coding processed_transcript MGP_129S1SvImJ_T0070465.1 MGP_129S1SvImJ_G0029344.1 mouse_genomes_project 5 22170967 22172874 - Fastk protein_coding retained_intron MGP_129S1SvImJ_T0070466.1 MGP_129S1SvImJ_G0029344.1 mouse_genomes_project 5 22171035 22172863 - Fastk protein_coding processed_transcript MGP_129S1SvImJ_T0070467.1 MGP_129S1SvImJ_G0029344.1 mouse_genomes_project 5 22171597 22172863 - Fastk protein_coding processed_transcript MGP_129S1SvImJ_T0076117.1 MGP_129S1SvImJ_G0030418.1 mouse_genomes_project 5 157622307 157630776 - MGP_129S1SvImJ_P0076117 Rfc3 protein_coding protein_coding MGP_129S1SvImJ_T0076118.1 MGP_129S1SvImJ_G0030418.1 mouse_genomes_project 5 157622370 157623685 - Rfc3 protein_coding retained_intron MGP_129S1SvImJ_T0076119.1 MGP_129S1SvImJ_G0030418.1 mouse_genomes_project 5 157622372 157624315 - Rfc3 protein_coding retained_intron MGP_129S1SvImJ_T0076120.1 MGP_129S1SvImJ_G0030418.1 mouse_genomes_project 5 157622375 157630736 - Rfc3 protein_coding retained_intron MGP_129S1SvImJ_T0076121.1 MGP_129S1SvImJ_G0030418.1 mouse_genomes_project 5 157623969 157630742 - Rfc3 protein_coding retained_intron MGP_129S1SvImJ_T0076122.1 MGP_129S1SvImJ_G0030418.1 mouse_genomes_project 5 157626521 157630729 - Rfc3 protein_coding retained_intron MGP_129S1SvImJ_T0076123.1 MGP_129S1SvImJ_G0030418.1 mouse_genomes_project 5 157629118 157630761 - Rfc3 protein_coding retained_intron MGP_129S1SvImJ_T0099968.1 MGP_129S1SvImJ_G0038035.1 mouse_genomes_project 5 130289385 130289492 - Gm23151 snRNA snRNA MGP_129S1SvImJ_T0075047.1 MGP_129S1SvImJ_G0030204.1 mouse_genomes_project 5 140810967 140836560 - MGP_129S1SvImJ_P0075047 Prkrip1 protein_coding protein_coding MGP_129S1SvImJ_T0075048.1 MGP_129S1SvImJ_G0030204.1 mouse_genomes_project 5 140813924 140836507 - Prkrip1 protein_coding processed_transcript MGP_129S1SvImJ_T0075049.1 MGP_129S1SvImJ_G0030204.1 mouse_genomes_project 5 140814262 140835419 - MGP_129S1SvImJ_P0075049 Prkrip1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075050.1 MGP_129S1SvImJ_G0030204.1 mouse_genomes_project 5 140814267 140836505 - MGP_129S1SvImJ_P0075050 Prkrip1 protein_coding protein_coding MGP_129S1SvImJ_T0008196.1 MGP_129S1SvImJ_G0006683.1 mouse_genomes_project 5 77766335 77769691 + 1700017L05Rik lincRNA lincRNA MGP_129S1SvImJ_T0074697.1 MGP_129S1SvImJ_G0030144.1 mouse_genomes_project 5 134368315 134385410 - MGP_129S1SvImJ_P0074697 Sbds protein_coding protein_coding MGP_129S1SvImJ_T0074698.1 MGP_129S1SvImJ_G0030144.1 mouse_genomes_project 5 134368989 134385285 - MGP_129S1SvImJ_P0074698 Sbds protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074699.1 MGP_129S1SvImJ_G0030144.1 mouse_genomes_project 5 134370466 134383966 - MGP_129S1SvImJ_P0074699 Sbds protein_coding protein_coding MGP_129S1SvImJ_T0074700.1 MGP_129S1SvImJ_G0030144.1 mouse_genomes_project 5 134371013 134385372 - Sbds protein_coding processed_transcript MGP_129S1SvImJ_T0074701.1 MGP_129S1SvImJ_G0030144.1 mouse_genomes_project 5 134378239 134385358 - Sbds protein_coding processed_transcript MGP_129S1SvImJ_T0071838.1 MGP_129S1SvImJ_G0029581.1 mouse_genomes_project 5 65183124 65254954 + MGP_129S1SvImJ_P0071838 Ube2k protein_coding protein_coding MGP_129S1SvImJ_T0071839.1 MGP_129S1SvImJ_G0029581.1 mouse_genomes_project 5 65183151 65254148 + MGP_129S1SvImJ_P0071839 Ube2k protein_coding protein_coding MGP_129S1SvImJ_T0071840.1 MGP_129S1SvImJ_G0029581.1 mouse_genomes_project 5 65183154 65254954 + MGP_129S1SvImJ_P0071840 Ube2k protein_coding protein_coding MGP_129S1SvImJ_T0071841.1 MGP_129S1SvImJ_G0029581.1 mouse_genomes_project 5 65183197 65254344 + MGP_129S1SvImJ_P0071841 Ube2k protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071842.1 MGP_129S1SvImJ_G0029581.1 mouse_genomes_project 5 65183347 65255227 + MGP_129S1SvImJ_P0071842 Ube2k protein_coding protein_coding MGP_129S1SvImJ_T0071843.1 MGP_129S1SvImJ_G0029581.1 mouse_genomes_project 5 65220414 65223258 + Ube2k protein_coding retained_intron MGP_129S1SvImJ_T0071844.1 MGP_129S1SvImJ_G0029581.1 mouse_genomes_project 5 65250794 65254344 + Ube2k protein_coding retained_intron MGP_129S1SvImJ_T0073046.1 MGP_129S1SvImJ_G0029838.1 mouse_genomes_project 5 109471831 109536146 + MGP_129S1SvImJ_P0073046 protein_coding protein_coding MGP_129S1SvImJ_T0073047.1 MGP_129S1SvImJ_G0029838.1 mouse_genomes_project 5 109471831 109558952 + MGP_129S1SvImJ_P0073047 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0073048.1 MGP_129S1SvImJ_G0029838.1 mouse_genomes_project 5 109486522 109509052 + protein_coding processed_transcript MGP_129S1SvImJ_T0008345.1 MGP_129S1SvImJ_G0006785.1 mouse_genomes_project 5 122178405 122189053 + 4930413E15Rik lincRNA lincRNA MGP_129S1SvImJ_T0071860.1 MGP_129S1SvImJ_G0029583.1 mouse_genomes_project 5 65453769 65526091 + MGP_129S1SvImJ_P0071860 N4bp2 protein_coding protein_coding MGP_129S1SvImJ_T0071861.1 MGP_129S1SvImJ_G0029583.1 mouse_genomes_project 5 65454227 65477610 + N4bp2 protein_coding processed_transcript MGP_129S1SvImJ_T0071862.1 MGP_129S1SvImJ_G0029583.1 mouse_genomes_project 5 65454227 65466144 + N4bp2 protein_coding retained_intron MGP_129S1SvImJ_T0071863.1 MGP_129S1SvImJ_G0029583.1 mouse_genomes_project 5 65454368 65522479 + MGP_129S1SvImJ_P0071863 N4bp2 protein_coding protein_coding MGP_129S1SvImJ_T0071864.1 MGP_129S1SvImJ_G0029583.1 mouse_genomes_project 5 65454368 65512244 + MGP_129S1SvImJ_P0071864 N4bp2 protein_coding protein_coding MGP_129S1SvImJ_T0071865.1 MGP_129S1SvImJ_G0029583.1 mouse_genomes_project 5 65474298 65476452 + N4bp2 protein_coding retained_intron MGP_129S1SvImJ_T0071866.1 MGP_129S1SvImJ_G0029583.1 mouse_genomes_project 5 65494794 65497922 + N4bp2 protein_coding retained_intron MGP_129S1SvImJ_T0071867.1 MGP_129S1SvImJ_G0029583.1 mouse_genomes_project 5 65503445 65508772 + N4bp2 protein_coding retained_intron MGP_129S1SvImJ_T0071868.1 MGP_129S1SvImJ_G0029583.1 mouse_genomes_project 5 65521070 65522703 + N4bp2 protein_coding retained_intron MGP_129S1SvImJ_T0004735.1 MGP_129S1SvImJ_G0004101.1 mouse_genomes_project 5 74803224 74831767 + Gm15984 antisense antisense MGP_129S1SvImJ_T0004736.1 MGP_129S1SvImJ_G0004101.1 mouse_genomes_project 5 74803648 74815217 + Gm15984 antisense antisense MGP_129S1SvImJ_T0014861.1 MGP_129S1SvImJ_G0012950.1 mouse_genomes_project 5 813753 815465 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015186.1 MGP_129S1SvImJ_G0013275.1 mouse_genomes_project 5 140274447 140275304 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001464.1 MGP_129S1SvImJ_G0001385.1 mouse_genomes_project 5 5989777 5990008 + TEC TEC MGP_129S1SvImJ_T0101196.1 MGP_129S1SvImJ_G0039263.1 mouse_genomes_project 5 74155040 74155161 + Snora26 snoRNA snoRNA MGP_129S1SvImJ_T0099915.1 MGP_129S1SvImJ_G0037982.1 mouse_genomes_project 5 36963047 36963183 + Gm22249 snRNA snRNA MGP_129S1SvImJ_T0073817.1 MGP_129S1SvImJ_G0029989.1 mouse_genomes_project 5 120503014 120653390 + Ksr2 protein_coding retained_intron MGP_129S1SvImJ_T0073818.1 MGP_129S1SvImJ_G0029989.1 mouse_genomes_project 5 120503014 120887419 + MGP_129S1SvImJ_P0073818 Ksr2 protein_coding protein_coding MGP_129S1SvImJ_T0073819.1 MGP_129S1SvImJ_G0029989.1 mouse_genomes_project 5 120503835 120877951 + MGP_129S1SvImJ_P0073819 Ksr2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0008207.1 MGP_129S1SvImJ_G0006691.1 mouse_genomes_project 5 89803873 89824500 + Gm42912 lincRNA lincRNA MGP_129S1SvImJ_T0073059.1 MGP_129S1SvImJ_G0029842.1 mouse_genomes_project 5 109594879 109639489 - MGP_129S1SvImJ_P0073059 Glmn protein_coding protein_coding MGP_129S1SvImJ_T0073060.1 MGP_129S1SvImJ_G0029842.1 mouse_genomes_project 5 109594881 109639427 - MGP_129S1SvImJ_P0073060 Glmn protein_coding protein_coding MGP_129S1SvImJ_T0073061.1 MGP_129S1SvImJ_G0029842.1 mouse_genomes_project 5 109594934 109597068 - Glmn protein_coding retained_intron MGP_129S1SvImJ_T0073062.1 MGP_129S1SvImJ_G0029842.1 mouse_genomes_project 5 109594935 109639735 - MGP_129S1SvImJ_P0073062 Glmn protein_coding protein_coding MGP_129S1SvImJ_T0073063.1 MGP_129S1SvImJ_G0029842.1 mouse_genomes_project 5 109594936 109639394 - MGP_129S1SvImJ_P0073063 Glmn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073064.1 MGP_129S1SvImJ_G0029842.1 mouse_genomes_project 5 109617755 109639416 - Glmn protein_coding processed_transcript MGP_129S1SvImJ_T0073065.1 MGP_129S1SvImJ_G0029842.1 mouse_genomes_project 5 109620760 109639489 - Glmn protein_coding processed_transcript MGP_129S1SvImJ_T0073066.1 MGP_129S1SvImJ_G0029842.1 mouse_genomes_project 5 109620794 109639396 - MGP_129S1SvImJ_P0073066 Glmn protein_coding protein_coding MGP_129S1SvImJ_T0015198.1 MGP_129S1SvImJ_G0013287.1 mouse_genomes_project 5 142717865 142718607 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073546.1 MGP_129S1SvImJ_G0029939.1 mouse_genomes_project 5 117183925 117192930 + MGP_129S1SvImJ_P0073546 Mvk protein_coding protein_coding MGP_129S1SvImJ_T0073547.1 MGP_129S1SvImJ_G0029939.1 mouse_genomes_project 5 117183942 117200223 + MGP_129S1SvImJ_P0073547 Mvk protein_coding protein_coding MGP_129S1SvImJ_T0073548.1 MGP_129S1SvImJ_G0029939.1 mouse_genomes_project 5 117183950 117200330 + Mvk protein_coding retained_intron MGP_129S1SvImJ_T0073549.1 MGP_129S1SvImJ_G0029939.1 mouse_genomes_project 5 117183959 117195299 + MGP_129S1SvImJ_P0073549 Mvk protein_coding protein_coding MGP_129S1SvImJ_T0073550.1 MGP_129S1SvImJ_G0029939.1 mouse_genomes_project 5 117183959 117192930 + MGP_129S1SvImJ_P0073550 Mvk protein_coding protein_coding MGP_129S1SvImJ_T0073551.1 MGP_129S1SvImJ_G0029939.1 mouse_genomes_project 5 117183962 117200337 + MGP_129S1SvImJ_P0073551 Mvk protein_coding protein_coding MGP_129S1SvImJ_T0073552.1 MGP_129S1SvImJ_G0029939.1 mouse_genomes_project 5 117192202 117200318 + MGP_129S1SvImJ_P0073552 Mvk protein_coding protein_coding MGP_129S1SvImJ_T0072911.1 MGP_129S1SvImJ_G0029802.1 mouse_genomes_project 5 105284927 105294476 - MGP_129S1SvImJ_P0072911 1700016H13Rik protein_coding protein_coding MGP_129S1SvImJ_T0072912.1 MGP_129S1SvImJ_G0029802.1 mouse_genomes_project 5 105285317 105294198 - MGP_129S1SvImJ_P0072912 1700016H13Rik protein_coding protein_coding MGP_129S1SvImJ_T0072913.1 MGP_129S1SvImJ_G0029802.1 mouse_genomes_project 5 105285475 105294189 - MGP_129S1SvImJ_P0072913 1700016H13Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072914.1 MGP_129S1SvImJ_G0029802.1 mouse_genomes_project 5 105285481 105294214 - MGP_129S1SvImJ_P0072914 1700016H13Rik protein_coding protein_coding MGP_129S1SvImJ_T0072915.1 MGP_129S1SvImJ_G0029802.1 mouse_genomes_project 5 105285586 105294189 - MGP_129S1SvImJ_P0072915 1700016H13Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072916.1 MGP_129S1SvImJ_G0029802.1 mouse_genomes_project 5 105285659 105294189 - MGP_129S1SvImJ_P0072916 1700016H13Rik protein_coding protein_coding MGP_129S1SvImJ_T0072917.1 MGP_129S1SvImJ_G0029802.1 mouse_genomes_project 5 105285659 105294190 - MGP_129S1SvImJ_P0072917 1700016H13Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0001511.1 MGP_129S1SvImJ_G0001430.1 mouse_genomes_project 5 29198914 29202889 - TEC TEC MGP_129S1SvImJ_T0074480.1 MGP_129S1SvImJ_G0030103.1 mouse_genomes_project 5 128466922 128475763 + Atp6v0a2 protein_coding processed_transcript MGP_129S1SvImJ_T0074481.1 MGP_129S1SvImJ_G0030103.1 mouse_genomes_project 5 128467398 128503346 + MGP_129S1SvImJ_P0074481 Atp6v0a2 protein_coding protein_coding MGP_129S1SvImJ_T0074482.1 MGP_129S1SvImJ_G0030103.1 mouse_genomes_project 5 128467411 128501031 + MGP_129S1SvImJ_P0074482 Atp6v0a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074483.1 MGP_129S1SvImJ_G0030103.1 mouse_genomes_project 5 128467515 128479835 + Atp6v0a2 protein_coding retained_intron MGP_129S1SvImJ_T0074484.1 MGP_129S1SvImJ_G0030103.1 mouse_genomes_project 5 128491439 128496790 + Atp6v0a2 protein_coding processed_transcript MGP_129S1SvImJ_T0074485.1 MGP_129S1SvImJ_G0030103.1 mouse_genomes_project 5 128493006 128502492 + Atp6v0a2 protein_coding retained_intron MGP_129S1SvImJ_T0074486.1 MGP_129S1SvImJ_G0030103.1 mouse_genomes_project 5 128497093 128500708 + MGP_129S1SvImJ_P0074486 Atp6v0a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071786.1 MGP_129S1SvImJ_G0029572.1 mouse_genomes_project 5 64750485 64787798 + MGP_129S1SvImJ_P0071786 Klhl5 protein_coding protein_coding MGP_129S1SvImJ_T0071787.1 MGP_129S1SvImJ_G0029572.1 mouse_genomes_project 5 64750561 64752992 + Klhl5 protein_coding retained_intron MGP_129S1SvImJ_T0071788.1 MGP_129S1SvImJ_G0029572.1 mouse_genomes_project 5 64750806 64786683 + MGP_129S1SvImJ_P0071788 Klhl5 protein_coding protein_coding MGP_129S1SvImJ_T0071789.1 MGP_129S1SvImJ_G0029572.1 mouse_genomes_project 5 64750812 64753942 + Klhl5 protein_coding processed_transcript MGP_129S1SvImJ_T0071790.1 MGP_129S1SvImJ_G0029572.1 mouse_genomes_project 5 64751080 64773347 + Klhl5 protein_coding processed_transcript MGP_129S1SvImJ_T0071791.1 MGP_129S1SvImJ_G0029572.1 mouse_genomes_project 5 64775774 64787798 + MGP_129S1SvImJ_P0071791 Klhl5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075371.1 MGP_129S1SvImJ_G0030268.1 mouse_genomes_project 5 143130026 143144819 + MGP_129S1SvImJ_P0075371 Stag3 protein_coding protein_coding MGP_129S1SvImJ_T0075372.1 MGP_129S1SvImJ_G0030268.1 mouse_genomes_project 5 143130295 143168005 + Stag3 protein_coding retained_intron MGP_129S1SvImJ_T0075373.1 MGP_129S1SvImJ_G0030268.1 mouse_genomes_project 5 143130312 143168002 + Stag3 protein_coding retained_intron MGP_129S1SvImJ_T0075374.1 MGP_129S1SvImJ_G0030268.1 mouse_genomes_project 5 143130312 143168005 + MGP_129S1SvImJ_P0075374 Stag3 protein_coding protein_coding MGP_129S1SvImJ_T0075375.1 MGP_129S1SvImJ_G0030268.1 mouse_genomes_project 5 143130330 143168005 + MGP_129S1SvImJ_P0075375 Stag3 protein_coding protein_coding MGP_129S1SvImJ_T0075376.1 MGP_129S1SvImJ_G0030268.1 mouse_genomes_project 5 143130342 143144474 + MGP_129S1SvImJ_P0075376 Stag3 protein_coding protein_coding MGP_129S1SvImJ_T0075377.1 MGP_129S1SvImJ_G0030268.1 mouse_genomes_project 5 143153227 143155493 + Stag3 protein_coding processed_transcript MGP_129S1SvImJ_T0075378.1 MGP_129S1SvImJ_G0030268.1 mouse_genomes_project 5 143158474 143165232 + MGP_129S1SvImJ_P0075378 Stag3 protein_coding protein_coding MGP_129S1SvImJ_T0075379.1 MGP_129S1SvImJ_G0030268.1 mouse_genomes_project 5 143165186 143167998 + MGP_129S1SvImJ_P0075379 Stag3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0004789.1 MGP_129S1SvImJ_G0004137.1 mouse_genomes_project 5 112707799 112720523 + Gm15788 antisense antisense MGP_129S1SvImJ_T0004790.1 MGP_129S1SvImJ_G0004137.1 mouse_genomes_project 5 112707799 112720833 + Gm15788 antisense antisense MGP_129S1SvImJ_T0070357.1 MGP_129S1SvImJ_G0029327.1 mouse_genomes_project 5 20054918 20114431 - Orc5 protein_coding retained_intron MGP_129S1SvImJ_T0070358.1 MGP_129S1SvImJ_G0029327.1 mouse_genomes_project 5 20054922 20114502 - MGP_129S1SvImJ_P0070358 Orc5 protein_coding protein_coding MGP_129S1SvImJ_T0070359.1 MGP_129S1SvImJ_G0029327.1 mouse_genomes_project 5 20082360 20086035 - Orc5 protein_coding retained_intron MGP_129S1SvImJ_T0070360.1 MGP_129S1SvImJ_G0029327.1 mouse_genomes_project 5 20086884 20113646 - MGP_129S1SvImJ_P0070360 Orc5 protein_coding protein_coding MGP_129S1SvImJ_T0070361.1 MGP_129S1SvImJ_G0029327.1 mouse_genomes_project 5 20086919 20114502 - Orc5 protein_coding processed_transcript MGP_129S1SvImJ_T0070362.1 MGP_129S1SvImJ_G0029327.1 mouse_genomes_project 5 20110525 20114556 - Orc5 protein_coding processed_transcript MGP_129S1SvImJ_T0004907.1 MGP_129S1SvImJ_G0004219.1 mouse_genomes_project 5 152868220 152914825 - 2210019I11Rik antisense antisense MGP_129S1SvImJ_T0004908.1 MGP_129S1SvImJ_G0004219.1 mouse_genomes_project 5 152870379 152914806 - 2210019I11Rik antisense antisense MGP_129S1SvImJ_T0004909.1 MGP_129S1SvImJ_G0004219.1 mouse_genomes_project 5 152878323 152914299 - 2210019I11Rik antisense antisense MGP_129S1SvImJ_T0073565.1 MGP_129S1SvImJ_G0029943.1 mouse_genomes_project 5 117479019 117493598 + MGP_129S1SvImJ_P0073565 Tchp protein_coding protein_coding MGP_129S1SvImJ_T0073566.1 MGP_129S1SvImJ_G0029943.1 mouse_genomes_project 5 117479078 117480699 + Tchp protein_coding processed_transcript MGP_129S1SvImJ_T0073567.1 MGP_129S1SvImJ_G0029943.1 mouse_genomes_project 5 117479123 117493598 + Tchp protein_coding retained_intron MGP_129S1SvImJ_T0073568.1 MGP_129S1SvImJ_G0029943.1 mouse_genomes_project 5 117482323 117485163 + Tchp protein_coding retained_intron MGP_129S1SvImJ_T0073569.1 MGP_129S1SvImJ_G0029943.1 mouse_genomes_project 5 117485899 117490960 + MGP_129S1SvImJ_P0073569 Tchp protein_coding protein_coding MGP_129S1SvImJ_T0073570.1 MGP_129S1SvImJ_G0029943.1 mouse_genomes_project 5 117486223 117493598 + Tchp protein_coding processed_transcript MGP_129S1SvImJ_T0073571.1 MGP_129S1SvImJ_G0029943.1 mouse_genomes_project 5 117488823 117489990 + Tchp protein_coding retained_intron MGP_129S1SvImJ_T0073572.1 MGP_129S1SvImJ_G0029943.1 mouse_genomes_project 5 117490954 117492429 + Tchp protein_coding retained_intron MGP_129S1SvImJ_T0073975.1 MGP_129S1SvImJ_G0030027.1 mouse_genomes_project 5 124913607 124937472 - MGP_129S1SvImJ_P0073975 Erp29 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073978.1 MGP_129S1SvImJ_G0030027.1 mouse_genomes_project 5 124925801 124937491 - MGP_129S1SvImJ_P0073978 Erp29 protein_coding protein_coding MGP_129S1SvImJ_T0073979.1 MGP_129S1SvImJ_G0030027.1 mouse_genomes_project 5 124929737 124937481 - MGP_129S1SvImJ_P0073979 Erp29 protein_coding protein_coding MGP_129S1SvImJ_T0073980.1 MGP_129S1SvImJ_G0030027.1 mouse_genomes_project 5 124930222 124937333 - MGP_129S1SvImJ_P0073980 Erp29 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075293.1 MGP_129S1SvImJ_G0030250.1 mouse_genomes_project 5 142743506 142752979 - MGP_129S1SvImJ_P0075293 Gjc3 protein_coding protein_coding MGP_129S1SvImJ_T0075294.1 MGP_129S1SvImJ_G0030250.1 mouse_genomes_project 5 142752392 142752976 - Gjc3 protein_coding retained_intron MGP_129S1SvImJ_T0010712.1 MGP_129S1SvImJ_G0008828.1 mouse_genomes_project 5 84135292 84135375 + Gm44303 miRNA miRNA MGP_129S1SvImJ_T0008470.1 MGP_129S1SvImJ_G0006873.1 mouse_genomes_project 5 154954222 154963502 + Gm42788 lincRNA lincRNA MGP_129S1SvImJ_T0074276.1 MGP_129S1SvImJ_G0030071.1 mouse_genomes_project 5 127219435 127221377 - MGP_129S1SvImJ_P0074276 Il31 protein_coding protein_coding MGP_129S1SvImJ_T0074277.1 MGP_129S1SvImJ_G0030071.1 mouse_genomes_project 5 127219436 127221871 - MGP_129S1SvImJ_P0074277 Il31 protein_coding protein_coding MGP_129S1SvImJ_T0074278.1 MGP_129S1SvImJ_G0030071.1 mouse_genomes_project 5 127219679 127228613 - MGP_129S1SvImJ_P0074278 Il31 protein_coding protein_coding MGP_129S1SvImJ_T0074279.1 MGP_129S1SvImJ_G0030071.1 mouse_genomes_project 5 127221439 127221800 - Il31 protein_coding processed_transcript MGP_129S1SvImJ_T0015084.1 MGP_129S1SvImJ_G0013173.1 mouse_genomes_project 5 89852917 89854307 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072619.1 MGP_129S1SvImJ_G0029744.1 mouse_genomes_project 5 93377282 93382798 - MGP_129S1SvImJ_P0072619 U90926 protein_coding protein_coding MGP_129S1SvImJ_T0072620.1 MGP_129S1SvImJ_G0029744.1 mouse_genomes_project 5 93377285 93382798 - MGP_129S1SvImJ_P0072620 U90926 protein_coding protein_coding MGP_129S1SvImJ_T0072621.1 MGP_129S1SvImJ_G0029744.1 mouse_genomes_project 5 93377503 93379742 - U90926 protein_coding retained_intron MGP_129S1SvImJ_T0074931.1 MGP_129S1SvImJ_G0030182.1 mouse_genomes_project 5 139899693 139919075 - MGP_129S1SvImJ_P0074931 Pom121 protein_coding protein_coding MGP_129S1SvImJ_T0001880.1 MGP_129S1SvImJ_G0001794.1 mouse_genomes_project 5 136219644 136220618 - TEC TEC MGP_129S1SvImJ_T0004690.1 MGP_129S1SvImJ_G0004066.1 mouse_genomes_project 5 35375978 35379451 - Gm26647 antisense antisense MGP_129S1SvImJ_T0072071.1 MGP_129S1SvImJ_G0029617.1 mouse_genomes_project 5 72704244 72824306 - MGP_129S1SvImJ_P0072071 Tec protein_coding protein_coding MGP_129S1SvImJ_T0072072.1 MGP_129S1SvImJ_G0029617.1 mouse_genomes_project 5 72704251 72824321 - MGP_129S1SvImJ_P0072072 Tec protein_coding protein_coding MGP_129S1SvImJ_T0072073.1 MGP_129S1SvImJ_G0029617.1 mouse_genomes_project 5 72704262 72824258 - MGP_129S1SvImJ_P0072073 Tec protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072074.1 MGP_129S1SvImJ_G0029617.1 mouse_genomes_project 5 72704266 72824345 - MGP_129S1SvImJ_P0072074 Tec protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072075.1 MGP_129S1SvImJ_G0029617.1 mouse_genomes_project 5 72704266 72824308 - MGP_129S1SvImJ_P0072075 Tec protein_coding protein_coding MGP_129S1SvImJ_T0072076.1 MGP_129S1SvImJ_G0029617.1 mouse_genomes_project 5 72704266 72735639 - MGP_129S1SvImJ_P0072076 Tec protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072077.1 MGP_129S1SvImJ_G0029617.1 mouse_genomes_project 5 72721731 72824311 - MGP_129S1SvImJ_P0072077 Tec protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072078.1 MGP_129S1SvImJ_G0029617.1 mouse_genomes_project 5 72779381 72824305 - Tec protein_coding retained_intron MGP_129S1SvImJ_T0072079.1 MGP_129S1SvImJ_G0029617.1 mouse_genomes_project 5 72779685 72800598 - MGP_129S1SvImJ_P0072079 Tec protein_coding protein_coding MGP_129S1SvImJ_T0015104.1 MGP_129S1SvImJ_G0013193.1 mouse_genomes_project 5 102091692 102092045 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098611.1 MGP_129S1SvImJ_G0036696.1 mouse_genomes_project 5 135819073 135819196 + Gm27266 rRNA rRNA MGP_129S1SvImJ_T0072080.1 MGP_129S1SvImJ_G0029618.1 mouse_genomes_project 5 72878012 72946434 + MGP_129S1SvImJ_P0072080 protein_coding protein_coding MGP_129S1SvImJ_T0072081.1 MGP_129S1SvImJ_G0029618.1 mouse_genomes_project 5 72878077 72946416 + MGP_129S1SvImJ_P0072081 protein_coding protein_coding MGP_129S1SvImJ_T0072082.1 MGP_129S1SvImJ_G0029618.1 mouse_genomes_project 5 72878124 72882194 + protein_coding retained_intron MGP_129S1SvImJ_T0072083.1 MGP_129S1SvImJ_G0029618.1 mouse_genomes_project 5 72878376 72925078 + MGP_129S1SvImJ_P0072083 protein_coding protein_coding MGP_129S1SvImJ_T0072084.1 MGP_129S1SvImJ_G0029618.1 mouse_genomes_project 5 72916166 72942307 + protein_coding retained_intron MGP_129S1SvImJ_T0001677.1 MGP_129S1SvImJ_G0001593.1 mouse_genomes_project 5 66333812 66336767 - TEC TEC MGP_129S1SvImJ_T0072671.1 MGP_129S1SvImJ_G0029752.1 mouse_genomes_project 5 93640627 93703618 - MGP_129S1SvImJ_P0072671 Scarb2 protein_coding protein_coding MGP_129S1SvImJ_T0072672.1 MGP_129S1SvImJ_G0029752.1 mouse_genomes_project 5 93702763 93704815 - Scarb2 protein_coding retained_intron MGP_129S1SvImJ_T0010707.1 MGP_129S1SvImJ_G0008823.1 mouse_genomes_project 5 75299238 75299312 + Mir7025 miRNA miRNA MGP_129S1SvImJ_T0075507.1 MGP_129S1SvImJ_G0030293.1 mouse_genomes_project 5 144843194 144846488 - MGP_129S1SvImJ_P0075507 Psmg3 protein_coding protein_coding MGP_129S1SvImJ_T0075508.1 MGP_129S1SvImJ_G0030293.1 mouse_genomes_project 5 144843215 144846446 - MGP_129S1SvImJ_P0075508 Psmg3 protein_coding protein_coding MGP_129S1SvImJ_T0075509.1 MGP_129S1SvImJ_G0030293.1 mouse_genomes_project 5 144844077 144846478 - Psmg3 protein_coding retained_intron MGP_129S1SvImJ_T0011851.1 MGP_129S1SvImJ_G0009945.1 mouse_genomes_project 5 93544369 93554511 - MGP_129S1SvImJ_P0011851 Cxcl11 polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0011852.1 MGP_129S1SvImJ_G0009945.1 mouse_genomes_project 5 93544372 93551811 - MGP_129S1SvImJ_P0011852 Cxcl11 polymorphic_pseudogene protein_coding MGP_129S1SvImJ_T0072648.1 MGP_129S1SvImJ_G0009945.1 mouse_genomes_project 5 93545608 93551748 - MGP_129S1SvImJ_P0072648 Cxcl11 polymorphic_pseudogene unknown_likely_coding MGP_129S1SvImJ_T0075029.1 MGP_129S1SvImJ_G0030201.1 mouse_genomes_project 5 140747936 140761218 - MGP_129S1SvImJ_P0075029 Lrwd1 protein_coding protein_coding MGP_129S1SvImJ_T0075030.1 MGP_129S1SvImJ_G0030201.1 mouse_genomes_project 5 140748231 140761145 - Lrwd1 protein_coding retained_intron MGP_129S1SvImJ_T0075031.1 MGP_129S1SvImJ_G0030201.1 mouse_genomes_project 5 140748239 140750724 - Lrwd1 protein_coding retained_intron MGP_129S1SvImJ_T0075032.1 MGP_129S1SvImJ_G0030201.1 mouse_genomes_project 5 140748856 140755407 - MGP_129S1SvImJ_P0075032 Lrwd1 protein_coding protein_coding MGP_129S1SvImJ_T0075033.1 MGP_129S1SvImJ_G0030201.1 mouse_genomes_project 5 140754565 140761166 - Lrwd1 protein_coding retained_intron MGP_129S1SvImJ_T0075034.1 MGP_129S1SvImJ_G0030201.1 mouse_genomes_project 5 140755837 140761146 - Lrwd1 protein_coding retained_intron MGP_129S1SvImJ_T0075035.1 MGP_129S1SvImJ_G0030201.1 mouse_genomes_project 5 140756833 140761206 - Lrwd1 protein_coding retained_intron MGP_129S1SvImJ_T0075036.1 MGP_129S1SvImJ_G0030201.1 mouse_genomes_project 5 140757465 140759036 - Lrwd1 protein_coding retained_intron MGP_129S1SvImJ_T0075037.1 MGP_129S1SvImJ_G0030201.1 mouse_genomes_project 5 140758190 140761141 - MGP_129S1SvImJ_P0075037 Lrwd1 protein_coding protein_coding MGP_129S1SvImJ_T0073292.1 MGP_129S1SvImJ_G0029890.1 mouse_genomes_project 5 113128133 113135180 + MGP_129S1SvImJ_P0073292 Ddx51 protein_coding protein_coding MGP_129S1SvImJ_T0073293.1 MGP_129S1SvImJ_G0029890.1 mouse_genomes_project 5 113128228 113129828 + Ddx51 protein_coding retained_intron MGP_129S1SvImJ_T0073294.1 MGP_129S1SvImJ_G0029890.1 mouse_genomes_project 5 113129819 113130588 + Ddx51 protein_coding retained_intron MGP_129S1SvImJ_T0073295.1 MGP_129S1SvImJ_G0029890.1 mouse_genomes_project 5 113131317 113131793 + Ddx51 protein_coding retained_intron MGP_129S1SvImJ_T0073296.1 MGP_129S1SvImJ_G0029890.1 mouse_genomes_project 5 113131544 113132554 + MGP_129S1SvImJ_P0073296 Ddx51 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071223.1 MGP_129S1SvImJ_G0029472.1 mouse_genomes_project 5 33162514 33172291 + Msantd1 protein_coding processed_transcript MGP_129S1SvImJ_T0071224.1 MGP_129S1SvImJ_G0029472.1 mouse_genomes_project 5 33169562 33178039 + MGP_129S1SvImJ_P0071224 Msantd1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0071225.1 MGP_129S1SvImJ_G0029472.1 mouse_genomes_project 5 33170389 33178314 + MGP_129S1SvImJ_P0071225 Msantd1 protein_coding protein_coding MGP_129S1SvImJ_T0071226.1 MGP_129S1SvImJ_G0029472.1 mouse_genomes_project 5 33172013 33178165 + MGP_129S1SvImJ_P0071226 Msantd1 protein_coding protein_coding MGP_129S1SvImJ_T0008318.1 MGP_129S1SvImJ_G0006766.1 mouse_genomes_project 5 116623839 116625420 - Gm42797 lincRNA lincRNA MGP_129S1SvImJ_T0010684.1 MGP_129S1SvImJ_G0008800.1 mouse_genomes_project 5 20308627 20308724 + Gm44363 miRNA miRNA MGP_129S1SvImJ_T0073504.1 MGP_129S1SvImJ_G0029931.1 mouse_genomes_project 5 116837323 116841550 - MGP_129S1SvImJ_P0073504 Alkbh2 protein_coding protein_coding MGP_129S1SvImJ_T0073505.1 MGP_129S1SvImJ_G0029931.1 mouse_genomes_project 5 116837332 116841592 - MGP_129S1SvImJ_P0073505 Alkbh2 protein_coding protein_coding MGP_129S1SvImJ_T0073506.1 MGP_129S1SvImJ_G0029931.1 mouse_genomes_project 5 116840979 116841555 - MGP_129S1SvImJ_P0073506 Alkbh2 protein_coding protein_coding MGP_129S1SvImJ_T0015203.1 MGP_129S1SvImJ_G0013292.1 mouse_genomes_project 5 143414528 143415386 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0074809.1 MGP_129S1SvImJ_G0030157.1 mouse_genomes_project 5 138900860 138964521 - MGP_129S1SvImJ_P0074809 Clip2 protein_coding protein_coding MGP_129S1SvImJ_T0074810.1 MGP_129S1SvImJ_G0030157.1 mouse_genomes_project 5 138900864 138964521 - MGP_129S1SvImJ_P0074810 Clip2 protein_coding protein_coding MGP_129S1SvImJ_T0074811.1 MGP_129S1SvImJ_G0030157.1 mouse_genomes_project 5 138925382 138927748 - Clip2 protein_coding retained_intron MGP_129S1SvImJ_T0071268.1 MGP_129S1SvImJ_G0029481.1 mouse_genomes_project 5 33870798 33907242 + MGP_129S1SvImJ_P0071268 Acox3 protein_coding protein_coding MGP_129S1SvImJ_T0071269.1 MGP_129S1SvImJ_G0029481.1 mouse_genomes_project 5 33870809 33906048 + MGP_129S1SvImJ_P0071269 Acox3 protein_coding protein_coding MGP_129S1SvImJ_T0071270.1 MGP_129S1SvImJ_G0029481.1 mouse_genomes_project 5 33870836 33876465 + MGP_129S1SvImJ_P0071270 Acox3 protein_coding protein_coding MGP_129S1SvImJ_T0071271.1 MGP_129S1SvImJ_G0029481.1 mouse_genomes_project 5 33870837 33908793 + MGP_129S1SvImJ_P0071271 Acox3 protein_coding protein_coding MGP_129S1SvImJ_T0071272.1 MGP_129S1SvImJ_G0029481.1 mouse_genomes_project 5 33870850 33875160 + Acox3 protein_coding retained_intron MGP_129S1SvImJ_T0071273.1 MGP_129S1SvImJ_G0029481.1 mouse_genomes_project 5 33870860 33905317 + MGP_129S1SvImJ_P0071273 Acox3 protein_coding protein_coding MGP_129S1SvImJ_T0071274.1 MGP_129S1SvImJ_G0029481.1 mouse_genomes_project 5 33871281 33905310 + MGP_129S1SvImJ_P0071274 Acox3 protein_coding protein_coding MGP_129S1SvImJ_T0071275.1 MGP_129S1SvImJ_G0029481.1 mouse_genomes_project 5 33893749 33901775 + MGP_129S1SvImJ_P0071275 Acox3 protein_coding protein_coding MGP_129S1SvImJ_T0071276.1 MGP_129S1SvImJ_G0029481.1 mouse_genomes_project 5 33899060 33903360 + Acox3 protein_coding retained_intron MGP_129S1SvImJ_T0071277.1 MGP_129S1SvImJ_G0029481.1 mouse_genomes_project 5 33903539 33905328 + Acox3 protein_coding retained_intron MGP_129S1SvImJ_T0015120.1 MGP_129S1SvImJ_G0013209.1 mouse_genomes_project 5 107786686 107787152 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004793.1 MGP_129S1SvImJ_G0004140.1 mouse_genomes_project 5 113249305 113259235 + Gm15559 antisense antisense MGP_129S1SvImJ_T0001532.1 MGP_129S1SvImJ_G0001450.1 mouse_genomes_project 5 33843025 33843671 - TEC TEC MGP_129S1SvImJ_T0008276.1 MGP_129S1SvImJ_G0006745.1 mouse_genomes_project 5 110476382 110480248 + Gm10419 lincRNA lincRNA MGP_129S1SvImJ_T0008277.1 MGP_129S1SvImJ_G0006745.1 mouse_genomes_project 5 110478343 110483348 + Gm10419 lincRNA lincRNA MGP_129S1SvImJ_T0008278.1 MGP_129S1SvImJ_G0006745.1 mouse_genomes_project 5 110478788 110486405 + Gm10419 lincRNA lincRNA MGP_129S1SvImJ_T0008279.1 MGP_129S1SvImJ_G0006745.1 mouse_genomes_project 5 110480426 110488762 + Gm10419 lincRNA lincRNA MGP_129S1SvImJ_T0008280.1 MGP_129S1SvImJ_G0006745.1 mouse_genomes_project 5 110481402 110483349 + Gm10419 lincRNA lincRNA MGP_129S1SvImJ_T0071887.1 MGP_129S1SvImJ_G0029587.1 mouse_genomes_project 5 65720065 65807006 - MGP_129S1SvImJ_P0071887 Rbm47 protein_coding protein_coding MGP_129S1SvImJ_T0071888.1 MGP_129S1SvImJ_G0029587.1 mouse_genomes_project 5 65720065 65888427 - MGP_129S1SvImJ_P0071888 Rbm47 protein_coding protein_coding MGP_129S1SvImJ_T0071889.1 MGP_129S1SvImJ_G0029587.1 mouse_genomes_project 5 65720072 65790221 - MGP_129S1SvImJ_P0071889 Rbm47 protein_coding protein_coding MGP_129S1SvImJ_T0071890.1 MGP_129S1SvImJ_G0029587.1 mouse_genomes_project 5 65720073 65867265 - MGP_129S1SvImJ_P0071890 Rbm47 protein_coding protein_coding MGP_129S1SvImJ_T0071891.1 MGP_129S1SvImJ_G0029587.1 mouse_genomes_project 5 65723136 65866419 - MGP_129S1SvImJ_P0071891 Rbm47 protein_coding protein_coding MGP_129S1SvImJ_T0071892.1 MGP_129S1SvImJ_G0029587.1 mouse_genomes_project 5 65723136 65866419 - MGP_129S1SvImJ_P0071892 Rbm47 protein_coding protein_coding MGP_129S1SvImJ_T0071893.1 MGP_129S1SvImJ_G0029587.1 mouse_genomes_project 5 65723370 65790320 - MGP_129S1SvImJ_P0071893 Rbm47 protein_coding protein_coding MGP_129S1SvImJ_T0071894.1 MGP_129S1SvImJ_G0029587.1 mouse_genomes_project 5 65729928 65866297 - Rbm47 protein_coding retained_intron MGP_129S1SvImJ_T0071895.1 MGP_129S1SvImJ_G0029587.1 mouse_genomes_project 5 65731171 65759271 - MGP_129S1SvImJ_P0071895 Rbm47 protein_coding protein_coding MGP_129S1SvImJ_T0071896.1 MGP_129S1SvImJ_G0029587.1 mouse_genomes_project 5 65731414 65791211 - Rbm47 protein_coding processed_transcript MGP_129S1SvImJ_T0071897.1 MGP_129S1SvImJ_G0029587.1 mouse_genomes_project 5 65731606 65790205 - MGP_129S1SvImJ_P0071897 Rbm47 protein_coding protein_coding MGP_129S1SvImJ_T0071898.1 MGP_129S1SvImJ_G0029587.1 mouse_genomes_project 5 65731626 65866664 - MGP_129S1SvImJ_P0071898 Rbm47 protein_coding protein_coding MGP_129S1SvImJ_T0071899.1 MGP_129S1SvImJ_G0029587.1 mouse_genomes_project 5 65750846 65867129 - Rbm47 protein_coding processed_transcript MGP_129S1SvImJ_T0071900.1 MGP_129S1SvImJ_G0029587.1 mouse_genomes_project 5 65750961 65867123 - Rbm47 protein_coding processed_transcript MGP_129S1SvImJ_T0001844.1 MGP_129S1SvImJ_G0001759.1 mouse_genomes_project 5 128075612 128077218 - TEC TEC MGP_129S1SvImJ_T0014956.1 MGP_129S1SvImJ_G0013045.1 mouse_genomes_project 5 31206118 31206333 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075270.1 MGP_129S1SvImJ_G0030244.1 mouse_genomes_project 5 142578081 142582839 - MGP_129S1SvImJ_P0075270 Mepce protein_coding protein_coding MGP_129S1SvImJ_T0075271.1 MGP_129S1SvImJ_G0030244.1 mouse_genomes_project 5 142578604 142582891 - MGP_129S1SvImJ_P0075271 Mepce protein_coding protein_coding MGP_129S1SvImJ_T0075272.1 MGP_129S1SvImJ_G0030244.1 mouse_genomes_project 5 142578658 142579526 - Mepce protein_coding retained_intron MGP_129S1SvImJ_T0075273.1 MGP_129S1SvImJ_G0030244.1 mouse_genomes_project 5 142579305 142583831 - MGP_129S1SvImJ_P0075273 Mepce protein_coding protein_coding MGP_129S1SvImJ_T0075274.1 MGP_129S1SvImJ_G0030244.1 mouse_genomes_project 5 142581061 142582867 - Mepce protein_coding processed_transcript MGP_129S1SvImJ_T0075642.1 MGP_129S1SvImJ_G0030322.1 mouse_genomes_project 5 148491593 148500135 - MGP_129S1SvImJ_P0075642 Rbak protein_coding protein_coding MGP_129S1SvImJ_T0075643.1 MGP_129S1SvImJ_G0030322.1 mouse_genomes_project 5 148491593 148500180 - MGP_129S1SvImJ_P0075643 Rbak protein_coding protein_coding MGP_129S1SvImJ_T0075644.1 MGP_129S1SvImJ_G0030322.1 mouse_genomes_project 5 148491594 148496142 - Rbak protein_coding retained_intron MGP_129S1SvImJ_T0075645.1 MGP_129S1SvImJ_G0030322.1 mouse_genomes_project 5 148498373 148500137 - Rbak protein_coding retained_intron MGP_129S1SvImJ_T0001721.1 MGP_129S1SvImJ_G0001636.1 mouse_genomes_project 5 75892528 75894851 + TEC TEC MGP_129S1SvImJ_T0014914.1 MGP_129S1SvImJ_G0013003.1 mouse_genomes_project 5 20295836 20297428 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075747.1 MGP_129S1SvImJ_G0030346.1 mouse_genomes_project 5 149514094 149518220 + MGP_129S1SvImJ_P0075747 Bhlha15 protein_coding protein_coding MGP_129S1SvImJ_T0074551.1 MGP_129S1SvImJ_G0030116.1 mouse_genomes_project 5 131549822 131571666 - MGP_129S1SvImJ_P0074551 Slc15a4 protein_coding protein_coding MGP_129S1SvImJ_T0074552.1 MGP_129S1SvImJ_G0030116.1 mouse_genomes_project 5 131549825 131571668 - MGP_129S1SvImJ_P0074552 Slc15a4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074553.1 MGP_129S1SvImJ_G0030116.1 mouse_genomes_project 5 131549825 131571476 - MGP_129S1SvImJ_P0074553 Slc15a4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074554.1 MGP_129S1SvImJ_G0030116.1 mouse_genomes_project 5 131550814 131558809 - MGP_129S1SvImJ_P0074554 Slc15a4 protein_coding protein_coding MGP_129S1SvImJ_T0074555.1 MGP_129S1SvImJ_G0030116.1 mouse_genomes_project 5 131556059 131587688 - MGP_129S1SvImJ_P0074555 Slc15a4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074556.1 MGP_129S1SvImJ_G0030116.1 mouse_genomes_project 5 131557910 131558736 - Slc15a4 protein_coding processed_transcript MGP_129S1SvImJ_T0074557.1 MGP_129S1SvImJ_G0030116.1 mouse_genomes_project 5 131557910 131558736 - Slc15a4 protein_coding processed_transcript MGP_129S1SvImJ_T0074558.1 MGP_129S1SvImJ_G0030116.1 mouse_genomes_project 5 131557936 131563481 - MGP_129S1SvImJ_P0074558 Slc15a4 protein_coding protein_coding MGP_129S1SvImJ_T0074559.1 MGP_129S1SvImJ_G0030116.1 mouse_genomes_project 5 131558734 131571133 - Slc15a4 protein_coding processed_transcript MGP_129S1SvImJ_T0074560.1 MGP_129S1SvImJ_G0030116.1 mouse_genomes_project 5 131562922 131587705 - MGP_129S1SvImJ_P0074560 Slc15a4 protein_coding protein_coding MGP_129S1SvImJ_T0074561.1 MGP_129S1SvImJ_G0030116.1 mouse_genomes_project 5 131568579 131571631 - Slc15a4 protein_coding retained_intron MGP_129S1SvImJ_T0008051.1 MGP_129S1SvImJ_G0006577.1 mouse_genomes_project 5 5991016 5992284 - Gm15611 lincRNA lincRNA MGP_129S1SvImJ_T0001833.1 MGP_129S1SvImJ_G0001748.1 mouse_genomes_project 5 126203115 126203677 - TEC TEC MGP_129S1SvImJ_T0075959.1 MGP_129S1SvImJ_G0030393.1 mouse_genomes_project 5 153580483 153597525 - MGP_129S1SvImJ_P0075959 Slc46a3 protein_coding protein_coding MGP_129S1SvImJ_T0075960.1 MGP_129S1SvImJ_G0030393.1 mouse_genomes_project 5 153580487 153597525 - MGP_129S1SvImJ_P0075960 Slc46a3 protein_coding protein_coding MGP_129S1SvImJ_T0075961.1 MGP_129S1SvImJ_G0030393.1 mouse_genomes_project 5 153580605 153581916 - Slc46a3 protein_coding retained_intron MGP_129S1SvImJ_T0075962.1 MGP_129S1SvImJ_G0030393.1 mouse_genomes_project 5 153596590 153597525 - MGP_129S1SvImJ_P0075962 Slc46a3 protein_coding protein_coding MGP_129S1SvImJ_T0014953.1 MGP_129S1SvImJ_G0013042.1 mouse_genomes_project 5 30573555 30573881 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075588.1 MGP_129S1SvImJ_G0030312.1 mouse_genomes_project 5 147721174 147791951 - MGP_129S1SvImJ_P0075588 Radil protein_coding protein_coding MGP_129S1SvImJ_T0075589.1 MGP_129S1SvImJ_G0030312.1 mouse_genomes_project 5 147721179 147791968 - Radil protein_coding retained_intron MGP_129S1SvImJ_T0075590.1 MGP_129S1SvImJ_G0030312.1 mouse_genomes_project 5 147721179 147786071 - MGP_129S1SvImJ_P0075590 Radil protein_coding protein_coding MGP_129S1SvImJ_T0075591.1 MGP_129S1SvImJ_G0030312.1 mouse_genomes_project 5 147721216 147791983 - MGP_129S1SvImJ_P0075591 Radil protein_coding protein_coding MGP_129S1SvImJ_T0075592.1 MGP_129S1SvImJ_G0030312.1 mouse_genomes_project 5 147722820 147723907 - Radil protein_coding retained_intron MGP_129S1SvImJ_T0075593.1 MGP_129S1SvImJ_G0030312.1 mouse_genomes_project 5 147746198 147747573 - MGP_129S1SvImJ_P0075593 Radil protein_coding protein_coding MGP_129S1SvImJ_T0075595.1 MGP_129S1SvImJ_G0030312.1 mouse_genomes_project 5 147784665 147791871 - MGP_129S1SvImJ_P0075595 Radil protein_coding protein_coding MGP_129S1SvImJ_T0004717.1 MGP_129S1SvImJ_G0004085.1 mouse_genomes_project 5 63491507 63492577 + Gm15819 antisense antisense MGP_129S1SvImJ_T0101206.1 MGP_129S1SvImJ_G0039273.1 mouse_genomes_project 5 99908276 99908407 + Gm24279 snoRNA snoRNA MGP_129S1SvImJ_T0102569.1 MGP_129S1SvImJ_G0040402.1 mouse_genomes_project 5 88313117 88314772 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0073916.1 MGP_129S1SvImJ_G0030012.1 mouse_genomes_project 5 124080881 124115787 - MGP_129S1SvImJ_P0073916 Dtx1 protein_coding protein_coding MGP_129S1SvImJ_T0073917.1 MGP_129S1SvImJ_G0030012.1 mouse_genomes_project 5 124080882 124097529 - Dtx1 protein_coding retained_intron MGP_129S1SvImJ_T0073918.1 MGP_129S1SvImJ_G0030012.1 mouse_genomes_project 5 124080928 124082757 - Dtx1 protein_coding retained_intron MGP_129S1SvImJ_T0073919.1 MGP_129S1SvImJ_G0030012.1 mouse_genomes_project 5 124081880 124083593 - Dtx1 protein_coding retained_intron MGP_129S1SvImJ_T0073920.1 MGP_129S1SvImJ_G0030012.1 mouse_genomes_project 5 124082130 124083491 - Dtx1 protein_coding retained_intron MGP_129S1SvImJ_T0073921.1 MGP_129S1SvImJ_G0030012.1 mouse_genomes_project 5 124096846 124108015 - Dtx1 protein_coding processed_transcript MGP_129S1SvImJ_T0075344.1 MGP_129S1SvImJ_G0030260.1 mouse_genomes_project 5 142983420 142989836 + MGP_129S1SvImJ_P0075344 Cnpy4 protein_coding protein_coding MGP_129S1SvImJ_T0075345.1 MGP_129S1SvImJ_G0030260.1 mouse_genomes_project 5 142985833 142988515 + MGP_129S1SvImJ_P0075345 Cnpy4 protein_coding protein_coding MGP_129S1SvImJ_T0075346.1 MGP_129S1SvImJ_G0030260.1 mouse_genomes_project 5 142986028 142988068 + Cnpy4 protein_coding retained_intron MGP_129S1SvImJ_T0014877.1 MGP_129S1SvImJ_G0012966.1 mouse_genomes_project 5 7019210 7019955 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072460.1 MGP_129S1SvImJ_G0029695.1 mouse_genomes_project 5 88899085 88907161 + MGP_129S1SvImJ_P0072460 Csn3 protein_coding protein_coding MGP_129S1SvImJ_T0072461.1 MGP_129S1SvImJ_G0029695.1 mouse_genomes_project 5 88899113 88905453 + MGP_129S1SvImJ_P0072461 Csn3 protein_coding protein_coding MGP_129S1SvImJ_T0072462.1 MGP_129S1SvImJ_G0029695.1 mouse_genomes_project 5 88899118 88903890 + Csn3 protein_coding retained_intron MGP_129S1SvImJ_T0072463.1 MGP_129S1SvImJ_G0029695.1 mouse_genomes_project 5 88899133 88903890 + Csn3 protein_coding retained_intron MGP_129S1SvImJ_T0072464.1 MGP_129S1SvImJ_G0029695.1 mouse_genomes_project 5 88899141 88906761 + MGP_129S1SvImJ_P0072464 Csn3 protein_coding protein_coding MGP_129S1SvImJ_T0072465.1 MGP_129S1SvImJ_G0029695.1 mouse_genomes_project 5 88902446 88904576 + Csn3 protein_coding retained_intron MGP_129S1SvImJ_T0001504.1 MGP_129S1SvImJ_G0001424.1 mouse_genomes_project 5 26477280 26478966 + TEC TEC MGP_129S1SvImJ_T0004728.1 MGP_129S1SvImJ_G0004095.1 mouse_genomes_project 5 67636811 67706166 + Gm15477 antisense antisense MGP_129S1SvImJ_T0004729.1 MGP_129S1SvImJ_G0004095.1 mouse_genomes_project 5 67636881 67695423 + Gm15477 antisense antisense MGP_129S1SvImJ_T0004811.1 MGP_129S1SvImJ_G0004152.1 mouse_genomes_project 5 118944470 118950955 + Gm14508 antisense antisense MGP_129S1SvImJ_T0008362.1 MGP_129S1SvImJ_G0006799.1 mouse_genomes_project 5 126820316 126824700 - AI480526 lincRNA lincRNA MGP_129S1SvImJ_T0008364.1 MGP_129S1SvImJ_G0006799.1 mouse_genomes_project 5 126820882 126825936 - AI480526 lincRNA lincRNA MGP_129S1SvImJ_T0008365.1 MGP_129S1SvImJ_G0006799.1 mouse_genomes_project 5 126821053 126827665 - AI480526 lincRNA lincRNA MGP_129S1SvImJ_T0008366.1 MGP_129S1SvImJ_G0006799.1 mouse_genomes_project 5 126821433 126828255 - AI480526 lincRNA lincRNA MGP_129S1SvImJ_T0008368.1 MGP_129S1SvImJ_G0006799.1 mouse_genomes_project 5 126822816 126827678 - AI480526 lincRNA lincRNA MGP_129S1SvImJ_T0008369.1 MGP_129S1SvImJ_G0006799.1 mouse_genomes_project 5 126824061 126826878 - AI480526 lincRNA lincRNA MGP_129S1SvImJ_T0008370.1 MGP_129S1SvImJ_G0006799.1 mouse_genomes_project 5 126824633 126827656 - AI480526 lincRNA lincRNA MGP_129S1SvImJ_T0001610.1 MGP_129S1SvImJ_G0001527.1 mouse_genomes_project 5 50826337 50830512 - TEC TEC MGP_129S1SvImJ_T0001647.1 MGP_129S1SvImJ_G0001563.1 mouse_genomes_project 5 64405763 64407485 + TEC TEC MGP_129S1SvImJ_T0008301.1 MGP_129S1SvImJ_G0006756.1 mouse_genomes_project 5 114494213 114498650 - Gm42488 lincRNA lincRNA MGP_129S1SvImJ_T0071265.1 MGP_129S1SvImJ_G0029480.1 mouse_genomes_project 5 33844135 33861791 - MGP_129S1SvImJ_P0071265 Trmt44 protein_coding protein_coding MGP_129S1SvImJ_T0071266.1 MGP_129S1SvImJ_G0029480.1 mouse_genomes_project 5 33859216 33861772 - Trmt44 protein_coding retained_intron MGP_129S1SvImJ_T0071267.1 MGP_129S1SvImJ_G0029480.1 mouse_genomes_project 5 33859468 33861483 - MGP_129S1SvImJ_P0071267 Trmt44 protein_coding protein_coding MGP_129S1SvImJ_T0098965.1 MGP_129S1SvImJ_G0037043.1 mouse_genomes_project 5 132802355 132803365 - Gm42871 sense_intronic sense_intronic MGP_129S1SvImJ_T0014893.1 MGP_129S1SvImJ_G0012982.1 mouse_genomes_project 5 16267674 16268272 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072503.1 MGP_129S1SvImJ_G0029713.1 mouse_genomes_project 5 89774949 89792818 + MGP_129S1SvImJ_P0072503 Dck protein_coding protein_coding MGP_129S1SvImJ_T0072504.1 MGP_129S1SvImJ_G0029713.1 mouse_genomes_project 5 89779136 89779955 + Dck protein_coding retained_intron MGP_129S1SvImJ_T0075884.1 MGP_129S1SvImJ_G0030377.1 mouse_genomes_project 5 152174430 152176437 - Gpr12 protein_coding retained_intron MGP_129S1SvImJ_T0075885.1 MGP_129S1SvImJ_G0030377.1 mouse_genomes_project 5 152174432 152177272 - MGP_129S1SvImJ_P0075885 Gpr12 protein_coding protein_coding MGP_129S1SvImJ_T0075886.1 MGP_129S1SvImJ_G0030377.1 mouse_genomes_project 5 152174784 152176865 - MGP_129S1SvImJ_P0075886 Gpr12 protein_coding protein_coding MGP_129S1SvImJ_T0075887.1 MGP_129S1SvImJ_G0030377.1 mouse_genomes_project 5 152175503 152176852 - MGP_129S1SvImJ_P0075887 Gpr12 protein_coding protein_coding MGP_129S1SvImJ_T0075888.1 MGP_129S1SvImJ_G0030377.1 mouse_genomes_project 5 152175687 152176876 - MGP_129S1SvImJ_P0075888 Gpr12 protein_coding protein_coding MGP_129S1SvImJ_T0008148.1 MGP_129S1SvImJ_G0006645.1 mouse_genomes_project 5 53448371 53458436 + Gm10440 lincRNA lincRNA MGP_129S1SvImJ_T0004836.1 MGP_129S1SvImJ_G0004169.1 mouse_genomes_project 5 125278005 125288912 - Gm16552 antisense antisense MGP_129S1SvImJ_T0072089.1 MGP_129S1SvImJ_G0029622.1 mouse_genomes_project 5 73000750 73047980 - Fryl protein_coding retained_intron MGP_129S1SvImJ_T0072090.1 MGP_129S1SvImJ_G0029622.1 mouse_genomes_project 5 73000750 73130615 - MGP_129S1SvImJ_P0072090 Fryl protein_coding protein_coding MGP_129S1SvImJ_T0072091.1 MGP_129S1SvImJ_G0029622.1 mouse_genomes_project 5 73001494 73134558 - MGP_129S1SvImJ_P0072091 Fryl protein_coding protein_coding MGP_129S1SvImJ_T0072092.1 MGP_129S1SvImJ_G0029622.1 mouse_genomes_project 5 73016858 73065409 - MGP_129S1SvImJ_P0072092 Fryl protein_coding protein_coding MGP_129S1SvImJ_T0072093.1 MGP_129S1SvImJ_G0029622.1 mouse_genomes_project 5 73022885 73025879 - Fryl protein_coding retained_intron MGP_129S1SvImJ_T0072094.1 MGP_129S1SvImJ_G0029622.1 mouse_genomes_project 5 73022988 73060278 - Fryl protein_coding processed_transcript MGP_129S1SvImJ_T0072095.1 MGP_129S1SvImJ_G0029622.1 mouse_genomes_project 5 73029254 73030185 - Fryl protein_coding retained_intron MGP_129S1SvImJ_T0072096.1 MGP_129S1SvImJ_G0029622.1 mouse_genomes_project 5 73039506 73040386 - Fryl protein_coding retained_intron MGP_129S1SvImJ_T0072097.1 MGP_129S1SvImJ_G0029622.1 mouse_genomes_project 5 73040576 73047702 - MGP_129S1SvImJ_P0072097 Fryl protein_coding protein_coding MGP_129S1SvImJ_T0072098.1 MGP_129S1SvImJ_G0029622.1 mouse_genomes_project 5 73050446 73053561 - Fryl protein_coding retained_intron MGP_129S1SvImJ_T0072099.1 MGP_129S1SvImJ_G0029622.1 mouse_genomes_project 5 73074376 73075370 - MGP_129S1SvImJ_P0072099 Fryl protein_coding protein_coding MGP_129S1SvImJ_T0072100.1 MGP_129S1SvImJ_G0029622.1 mouse_genomes_project 5 73076504 73151492 - Fryl protein_coding retained_intron MGP_129S1SvImJ_T0072101.1 MGP_129S1SvImJ_G0029622.1 mouse_genomes_project 5 73085509 73097830 - MGP_129S1SvImJ_P0072101 Fryl protein_coding protein_coding MGP_129S1SvImJ_T0072102.1 MGP_129S1SvImJ_G0029622.1 mouse_genomes_project 5 73096310 73100240 - MGP_129S1SvImJ_P0072102 Fryl protein_coding protein_coding MGP_129S1SvImJ_T0072103.1 MGP_129S1SvImJ_G0029622.1 mouse_genomes_project 5 73097242 73247398 - Fryl protein_coding retained_intron MGP_129S1SvImJ_T0072104.1 MGP_129S1SvImJ_G0029622.1 mouse_genomes_project 5 73130480 73178669 - MGP_129S1SvImJ_P0072104 Fryl protein_coding protein_coding MGP_129S1SvImJ_T0072105.1 MGP_129S1SvImJ_G0029622.1 mouse_genomes_project 5 73180593 73247562 - Fryl protein_coding retained_intron MGP_129S1SvImJ_T0004802.1 MGP_129S1SvImJ_G0004146.1 mouse_genomes_project 5 117486816 117487383 - Gm42789 antisense antisense MGP_129S1SvImJ_T0008469.1 MGP_129S1SvImJ_G0006872.1 mouse_genomes_project 5 154938580 154939954 + Gm42787 lincRNA lincRNA MGP_129S1SvImJ_T0070570.1 MGP_129S1SvImJ_G0029370.1 mouse_genomes_project 5 26109789 26151179 - MGP_129S1SvImJ_P0070570 protein_coding protein_coding MGP_129S1SvImJ_T0070571.1 MGP_129S1SvImJ_G0029370.1 mouse_genomes_project 5 26111419 26118970 - MGP_129S1SvImJ_P0070571 protein_coding protein_coding MGP_129S1SvImJ_T0070572.1 MGP_129S1SvImJ_G0029370.1 mouse_genomes_project 5 26114430 26143274 - MGP_129S1SvImJ_P0070572 protein_coding protein_coding MGP_129S1SvImJ_T0070573.1 MGP_129S1SvImJ_G0029370.1 mouse_genomes_project 5 26114738 26119116 - MGP_129S1SvImJ_P0070573 protein_coding protein_coding MGP_129S1SvImJ_T0070574.1 MGP_129S1SvImJ_G0029370.1 mouse_genomes_project 5 26118192 26119311 - MGP_129S1SvImJ_P0070574 protein_coding protein_coding MGP_129S1SvImJ_T0010737.1 MGP_129S1SvImJ_G0008853.1 mouse_genomes_project 5 138856111 138856210 + Gm26340 miRNA miRNA MGP_129S1SvImJ_T0018220.1 MGP_129S1SvImJ_G0015614.1 mouse_genomes_project 5 128432689 128436065 + Tctn2 processed_transcript retained_intron MGP_129S1SvImJ_T0018221.1 MGP_129S1SvImJ_G0015614.1 mouse_genomes_project 5 128432689 128466085 + Tctn2 processed_transcript processed_transcript MGP_129S1SvImJ_T0018222.1 MGP_129S1SvImJ_G0015614.1 mouse_genomes_project 5 128432724 128439667 + Tctn2 processed_transcript retained_intron MGP_129S1SvImJ_T0018223.1 MGP_129S1SvImJ_G0015614.1 mouse_genomes_project 5 128432727 128437313 + Tctn2 processed_transcript retained_intron MGP_129S1SvImJ_T0018224.1 MGP_129S1SvImJ_G0015614.1 mouse_genomes_project 5 128432732 128456903 + Tctn2 processed_transcript retained_intron MGP_129S1SvImJ_T0018225.1 MGP_129S1SvImJ_G0015614.1 mouse_genomes_project 5 128432737 128465805 + Tctn2 processed_transcript processed_transcript MGP_129S1SvImJ_T0008046.1 MGP_129S1SvImJ_G0006572.1 mouse_genomes_project 5 1657600 1677468 - Gm42744 lincRNA lincRNA MGP_129S1SvImJ_T0073992.1 MGP_129S1SvImJ_G0030032.1 mouse_genomes_project 5 125017855 125041949 - MGP_129S1SvImJ_P0073992 Mapkapk5 protein_coding protein_coding MGP_129S1SvImJ_T0073993.1 MGP_129S1SvImJ_G0030032.1 mouse_genomes_project 5 125017865 125041244 - MGP_129S1SvImJ_P0073993 Mapkapk5 protein_coding protein_coding MGP_129S1SvImJ_T0073994.1 MGP_129S1SvImJ_G0030032.1 mouse_genomes_project 5 125017869 125020065 - Mapkapk5 protein_coding retained_intron MGP_129S1SvImJ_T0073995.1 MGP_129S1SvImJ_G0030032.1 mouse_genomes_project 5 125017869 125018638 - Mapkapk5 protein_coding retained_intron MGP_129S1SvImJ_T0073996.1 MGP_129S1SvImJ_G0030032.1 mouse_genomes_project 5 125017869 125019998 - MGP_129S1SvImJ_P0073996 Mapkapk5 protein_coding protein_coding MGP_129S1SvImJ_T0073997.1 MGP_129S1SvImJ_G0030032.1 mouse_genomes_project 5 125017873 125033763 - Mapkapk5 protein_coding processed_transcript MGP_129S1SvImJ_T0073998.1 MGP_129S1SvImJ_G0030032.1 mouse_genomes_project 5 125017962 125041244 - MGP_129S1SvImJ_P0073998 Mapkapk5 protein_coding protein_coding MGP_129S1SvImJ_T0073999.1 MGP_129S1SvImJ_G0030032.1 mouse_genomes_project 5 125017962 125041244 - MGP_129S1SvImJ_P0073999 Mapkapk5 protein_coding protein_coding MGP_129S1SvImJ_T0074000.1 MGP_129S1SvImJ_G0030032.1 mouse_genomes_project 5 125018563 125041244 - Mapkapk5 protein_coding processed_transcript MGP_129S1SvImJ_T0074001.1 MGP_129S1SvImJ_G0030032.1 mouse_genomes_project 5 125019359 125026183 - Mapkapk5 protein_coding retained_intron MGP_129S1SvImJ_T0074002.1 MGP_129S1SvImJ_G0030032.1 mouse_genomes_project 5 125027724 125031893 - MGP_129S1SvImJ_P0074002 Mapkapk5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074003.1 MGP_129S1SvImJ_G0030032.1 mouse_genomes_project 5 125027919 125041275 - MGP_129S1SvImJ_P0074003 Mapkapk5 protein_coding protein_coding MGP_129S1SvImJ_T0074004.1 MGP_129S1SvImJ_G0030032.1 mouse_genomes_project 5 125029008 125033226 - Mapkapk5 protein_coding processed_transcript MGP_129S1SvImJ_T0001556.1 MGP_129S1SvImJ_G0001474.1 mouse_genomes_project 5 43165221 43166124 - TEC TEC MGP_129S1SvImJ_T0074371.1 MGP_129S1SvImJ_G0030086.1 mouse_genomes_project 5 127781746 127812613 - MGP_129S1SvImJ_P0074371 Vps37b protein_coding protein_coding MGP_129S1SvImJ_T0074372.1 MGP_129S1SvImJ_G0030086.1 mouse_genomes_project 5 127783243 127790019 - Vps37b protein_coding processed_transcript MGP_129S1SvImJ_T0074373.1 MGP_129S1SvImJ_G0030086.1 mouse_genomes_project 5 127806894 127812601 - Vps37b protein_coding processed_transcript MGP_129S1SvImJ_T0070034.1 MGP_129S1SvImJ_G0029268.1 mouse_genomes_project 5 1026540 1041980 + MGP_129S1SvImJ_P0070034 Mterf1a protein_coding protein_coding MGP_129S1SvImJ_T0072060.1 MGP_129S1SvImJ_G0029615.1 mouse_genomes_project 5 72586634 72609917 + MGP_129S1SvImJ_P0072060 Nipal1 protein_coding protein_coding MGP_129S1SvImJ_T0072061.1 MGP_129S1SvImJ_G0029615.1 mouse_genomes_project 5 72586652 72606462 + MGP_129S1SvImJ_P0072061 Nipal1 protein_coding protein_coding MGP_129S1SvImJ_T0072062.1 MGP_129S1SvImJ_G0029615.1 mouse_genomes_project 5 72586681 72597975 + Nipal1 protein_coding retained_intron MGP_129S1SvImJ_T0073392.1 MGP_129S1SvImJ_G0029910.1 mouse_genomes_project 5 115294384 115513566 - MGP_129S1SvImJ_P0073392 protein_coding protein_coding MGP_129S1SvImJ_T0073393.1 MGP_129S1SvImJ_G0029910.1 mouse_genomes_project 5 115294386 115374749 - protein_coding processed_transcript MGP_129S1SvImJ_T0073394.1 MGP_129S1SvImJ_G0029910.1 mouse_genomes_project 5 115383321 115489053 - protein_coding processed_transcript MGP_129S1SvImJ_T0073395.1 MGP_129S1SvImJ_G0029910.1 mouse_genomes_project 5 115433767 115489907 - MGP_129S1SvImJ_P0073395 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0101214.1 MGP_129S1SvImJ_G0039281.1 mouse_genomes_project 5 112774708 112774860 + Gm26277 snoRNA snoRNA MGP_129S1SvImJ_T0075892.1 MGP_129S1SvImJ_G0030379.1 mouse_genomes_project 5 152443839 152447985 + MGP_129S1SvImJ_P0075892 Rpl21 protein_coding protein_coding MGP_129S1SvImJ_T0075893.1 MGP_129S1SvImJ_G0030379.1 mouse_genomes_project 5 152444095 152445557 + Rpl21 protein_coding retained_intron MGP_129S1SvImJ_T0075894.1 MGP_129S1SvImJ_G0030379.1 mouse_genomes_project 5 152444144 152446938 + MGP_129S1SvImJ_P0075894 Rpl21 protein_coding protein_coding MGP_129S1SvImJ_T0075895.1 MGP_129S1SvImJ_G0030379.1 mouse_genomes_project 5 152444151 152446939 + MGP_129S1SvImJ_P0075895 Rpl21 protein_coding protein_coding MGP_129S1SvImJ_T0075896.1 MGP_129S1SvImJ_G0030379.1 mouse_genomes_project 5 152445133 152445916 + Rpl21 protein_coding retained_intron MGP_129S1SvImJ_T0075897.1 MGP_129S1SvImJ_G0030379.1 mouse_genomes_project 5 152446158 152446939 + Rpl21 protein_coding retained_intron MGP_129S1SvImJ_T0098371.1 MGP_129S1SvImJ_G0036456.1 mouse_genomes_project 5 140207019 140207401 - pseudogene pseudogene MGP_129S1SvImJ_T0102585.1 MGP_129S1SvImJ_G0040418.1 mouse_genomes_project 5 151253256 151288234 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0001603.1 MGP_129S1SvImJ_G0001520.1 mouse_genomes_project 5 48937686 48940253 + TEC TEC MGP_129S1SvImJ_T0001832.1 MGP_129S1SvImJ_G0001747.1 mouse_genomes_project 5 126131226 126135905 + TEC TEC MGP_129S1SvImJ_T0072471.1 MGP_129S1SvImJ_G0029700.1 mouse_genomes_project 5 89093839 89104710 + MGP_129S1SvImJ_P0072471 Smr2 protein_coding protein_coding MGP_129S1SvImJ_T0072472.1 MGP_129S1SvImJ_G0029700.1 mouse_genomes_project 5 89093839 89139281 + MGP_129S1SvImJ_P0072472 Smr2 protein_coding protein_coding MGP_129S1SvImJ_T0072473.1 MGP_129S1SvImJ_G0029700.1 mouse_genomes_project 5 89093839 89139281 + MGP_129S1SvImJ_P0072473 Smr2 protein_coding protein_coding MGP_129S1SvImJ_T0072474.1 MGP_129S1SvImJ_G0029700.1 mouse_genomes_project 5 89093839 89139281 + MGP_129S1SvImJ_P0072474 Smr2 protein_coding protein_coding MGP_129S1SvImJ_T0075512.1 MGP_129S1SvImJ_G0030295.1 mouse_genomes_project 5 145052650 145381502 - MGP_129S1SvImJ_P0075512 Mad1l1 protein_coding protein_coding MGP_129S1SvImJ_T0075513.1 MGP_129S1SvImJ_G0030295.1 mouse_genomes_project 5 145052650 145381500 - MGP_129S1SvImJ_P0075513 Mad1l1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075514.1 MGP_129S1SvImJ_G0030295.1 mouse_genomes_project 5 145052655 145221935 - Mad1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0075515.1 MGP_129S1SvImJ_G0030295.1 mouse_genomes_project 5 145134092 145160888 - Mad1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0075516.1 MGP_129S1SvImJ_G0030295.1 mouse_genomes_project 5 145189677 145221676 - Mad1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0075517.1 MGP_129S1SvImJ_G0030295.1 mouse_genomes_project 5 145212830 145315749 - Mad1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0071651.1 MGP_129S1SvImJ_G0029544.1 mouse_genomes_project 5 51334838 51342707 + MGP_129S1SvImJ_P0071651 Sod3 protein_coding protein_coding MGP_129S1SvImJ_T0001616.1 MGP_129S1SvImJ_G0001533.1 mouse_genomes_project 5 51205242 51208111 + TEC TEC MGP_129S1SvImJ_T0004794.1 MGP_129S1SvImJ_G0004141.1 mouse_genomes_project 5 113883807 113884582 - Gm43118 antisense antisense MGP_129S1SvImJ_T0075704.1 MGP_129S1SvImJ_G0030336.1 mouse_genomes_project 5 149071038 149093804 - MGP_129S1SvImJ_P0075704 Usp42 protein_coding protein_coding MGP_129S1SvImJ_T0075705.1 MGP_129S1SvImJ_G0030336.1 mouse_genomes_project 5 149074465 149076325 - Usp42 protein_coding processed_transcript MGP_129S1SvImJ_T0075706.1 MGP_129S1SvImJ_G0030336.1 mouse_genomes_project 5 149074480 149077918 - Usp42 protein_coding retained_intron MGP_129S1SvImJ_T0075707.1 MGP_129S1SvImJ_G0030336.1 mouse_genomes_project 5 149077134 149089554 - Usp42 protein_coding retained_intron MGP_129S1SvImJ_T0075708.1 MGP_129S1SvImJ_G0030336.1 mouse_genomes_project 5 149082379 149083672 - Usp42 protein_coding retained_intron MGP_129S1SvImJ_T0015201.1 MGP_129S1SvImJ_G0013290.1 mouse_genomes_project 5 142898258 142898460 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008485.1 MGP_129S1SvImJ_G0006882.1 mouse_genomes_project 5 156438746 156441122 - Gm5 lincRNA lincRNA MGP_129S1SvImJ_T0008486.1 MGP_129S1SvImJ_G0006882.1 mouse_genomes_project 5 156438814 156441293 - Gm5 lincRNA lincRNA MGP_129S1SvImJ_T0073101.1 MGP_129S1SvImJ_G0029849.1 mouse_genomes_project 5 110132791 110174413 + Mtf2 protein_coding processed_transcript MGP_129S1SvImJ_T0073102.1 MGP_129S1SvImJ_G0029849.1 mouse_genomes_project 5 110132828 110174708 + MGP_129S1SvImJ_P0073102 Mtf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073103.1 MGP_129S1SvImJ_G0029849.1 mouse_genomes_project 5 110132833 110174874 + Mtf2 protein_coding processed_transcript MGP_129S1SvImJ_T0073104.1 MGP_129S1SvImJ_G0029849.1 mouse_genomes_project 5 110132833 110175519 + Mtf2 protein_coding processed_transcript MGP_129S1SvImJ_T0073105.1 MGP_129S1SvImJ_G0029849.1 mouse_genomes_project 5 110132834 110136703 + Mtf2 protein_coding retained_intron MGP_129S1SvImJ_T0073106.1 MGP_129S1SvImJ_G0029849.1 mouse_genomes_project 5 110132846 110154683 + MGP_129S1SvImJ_P0073106 Mtf2 protein_coding protein_coding MGP_129S1SvImJ_T0073107.1 MGP_129S1SvImJ_G0029849.1 mouse_genomes_project 5 110132859 110174251 + MGP_129S1SvImJ_P0073107 Mtf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073108.1 MGP_129S1SvImJ_G0029849.1 mouse_genomes_project 5 110132859 110176254 + MGP_129S1SvImJ_P0073108 Mtf2 protein_coding protein_coding MGP_129S1SvImJ_T0073109.1 MGP_129S1SvImJ_G0029849.1 mouse_genomes_project 5 110132859 110175520 + MGP_129S1SvImJ_P0073109 Mtf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073110.1 MGP_129S1SvImJ_G0029849.1 mouse_genomes_project 5 110132861 110161495 + MGP_129S1SvImJ_P0073110 Mtf2 protein_coding protein_coding MGP_129S1SvImJ_T0073111.1 MGP_129S1SvImJ_G0029849.1 mouse_genomes_project 5 110132861 110174335 + MGP_129S1SvImJ_P0073111 Mtf2 protein_coding protein_coding MGP_129S1SvImJ_T0073112.1 MGP_129S1SvImJ_G0029849.1 mouse_genomes_project 5 110132874 110155271 + Mtf2 protein_coding processed_transcript MGP_129S1SvImJ_T0073113.1 MGP_129S1SvImJ_G0029849.1 mouse_genomes_project 5 110140039 110148296 + Mtf2 protein_coding processed_transcript MGP_129S1SvImJ_T0073114.1 MGP_129S1SvImJ_G0029849.1 mouse_genomes_project 5 110145272 110174720 + Mtf2 protein_coding processed_transcript MGP_129S1SvImJ_T0073115.1 MGP_129S1SvImJ_G0029849.1 mouse_genomes_project 5 110154310 110168102 + MGP_129S1SvImJ_P0073115 Mtf2 protein_coding protein_coding MGP_129S1SvImJ_T0073116.1 MGP_129S1SvImJ_G0029849.1 mouse_genomes_project 5 110159430 110171313 + MGP_129S1SvImJ_P0073116 Mtf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070735.1 MGP_129S1SvImJ_G0029400.1 mouse_genomes_project 5 28872176 28880074 + MGP_129S1SvImJ_P0070735 Emilin1 protein_coding protein_coding MGP_129S1SvImJ_T0070736.1 MGP_129S1SvImJ_G0029400.1 mouse_genomes_project 5 28872517 28879662 + Emilin1 protein_coding retained_intron MGP_129S1SvImJ_T0070737.1 MGP_129S1SvImJ_G0029400.1 mouse_genomes_project 5 28878717 28879846 + Emilin1 protein_coding retained_intron MGP_129S1SvImJ_T0074702.1 MGP_129S1SvImJ_G0030145.1 mouse_genomes_project 5 134385498 134420136 + Tyw1 protein_coding retained_intron MGP_129S1SvImJ_T0074703.1 MGP_129S1SvImJ_G0030145.1 mouse_genomes_project 5 134386940 134412508 + MGP_129S1SvImJ_P0074703 Tyw1 protein_coding protein_coding MGP_129S1SvImJ_T0074704.1 MGP_129S1SvImJ_G0030145.1 mouse_genomes_project 5 134386940 134480405 + MGP_129S1SvImJ_P0074704 Tyw1 protein_coding protein_coding MGP_129S1SvImJ_T0074705.1 MGP_129S1SvImJ_G0030145.1 mouse_genomes_project 5 134390268 134404038 + MGP_129S1SvImJ_P0074705 Tyw1 protein_coding protein_coding MGP_129S1SvImJ_T0018241.1 MGP_129S1SvImJ_G0015618.1 mouse_genomes_project 5 154786761 154807436 - Gm15411 processed_transcript lincRNA MGP_129S1SvImJ_T0018242.1 MGP_129S1SvImJ_G0015618.1 mouse_genomes_project 5 154790035 154807407 - Gm15411 processed_transcript lincRNA MGP_129S1SvImJ_T0018243.1 MGP_129S1SvImJ_G0015618.1 mouse_genomes_project 5 154805419 154807436 - Gm15411 processed_transcript retained_intron MGP_129S1SvImJ_T0010720.1 MGP_129S1SvImJ_G0008836.1 mouse_genomes_project 5 108859475 108859574 - Gm27527 miRNA miRNA MGP_129S1SvImJ_T0073257.1 MGP_129S1SvImJ_G0029884.1 mouse_genomes_project 5 112717848 112732992 - MGP_129S1SvImJ_P0073257 Pxmp2 protein_coding protein_coding MGP_129S1SvImJ_T0073258.1 MGP_129S1SvImJ_G0029884.1 mouse_genomes_project 5 112717861 112732827 - MGP_129S1SvImJ_P0073258 Pxmp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073259.1 MGP_129S1SvImJ_G0029884.1 mouse_genomes_project 5 112726461 112732808 - Pxmp2 protein_coding processed_transcript MGP_129S1SvImJ_T0073260.1 MGP_129S1SvImJ_G0029884.1 mouse_genomes_project 5 112730325 112732925 - Pxmp2 protein_coding retained_intron MGP_129S1SvImJ_T0072204.1 MGP_129S1SvImJ_G0029640.1 mouse_genomes_project 5 76312084 76323280 + Srd5a3 protein_coding retained_intron MGP_129S1SvImJ_T0072205.1 MGP_129S1SvImJ_G0029640.1 mouse_genomes_project 5 76312119 76312676 + Srd5a3 protein_coding processed_transcript MGP_129S1SvImJ_T0072206.1 MGP_129S1SvImJ_G0029640.1 mouse_genomes_project 5 76312141 76326925 + MGP_129S1SvImJ_P0072206 Srd5a3 protein_coding protein_coding MGP_129S1SvImJ_T0072207.1 MGP_129S1SvImJ_G0029640.1 mouse_genomes_project 5 76312513 76321563 + MGP_129S1SvImJ_P0072207 Srd5a3 protein_coding protein_coding MGP_129S1SvImJ_T0072208.1 MGP_129S1SvImJ_G0029640.1 mouse_genomes_project 5 76312543 76321755 + MGP_129S1SvImJ_P0072208 Srd5a3 protein_coding protein_coding MGP_129S1SvImJ_T0072209.1 MGP_129S1SvImJ_G0029640.1 mouse_genomes_project 5 76318451 76327375 + MGP_129S1SvImJ_P0072209 Srd5a3 protein_coding protein_coding MGP_129S1SvImJ_T0072210.1 MGP_129S1SvImJ_G0029640.1 mouse_genomes_project 5 76324929 76327635 + Srd5a3 protein_coding retained_intron MGP_129S1SvImJ_T0004882.1 MGP_129S1SvImJ_G0004203.1 mouse_genomes_project 5 140923138 141068357 + Gm16599 antisense antisense MGP_129S1SvImJ_T0072476.1 MGP_129S1SvImJ_G0029702.1 mouse_genomes_project 5 89186987 89187064 - MGP_129S1SvImJ_P0072476 Gm11115 protein_coding protein_coding MGP_129S1SvImJ_T0010724.1 MGP_129S1SvImJ_G0008840.1 mouse_genomes_project 5 115988841 115988897 - Mir7230 miRNA miRNA MGP_129S1SvImJ_T0001525.1 MGP_129S1SvImJ_G0001443.1 mouse_genomes_project 5 31914532 31918159 - TEC TEC MGP_129S1SvImJ_T0011611.1 MGP_129S1SvImJ_G0009727.1 mouse_genomes_project 5 27650823 27651152 + Gm26346 misc_RNA misc_RNA MGP_129S1SvImJ_T0015166.1 MGP_129S1SvImJ_G0013255.1 mouse_genomes_project 5 124033190 124033401 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008495.1 MGP_129S1SvImJ_G0006889.1 mouse_genomes_project 5 157375775 157437164 - D730045B01Rik lincRNA lincRNA MGP_129S1SvImJ_T0008496.1 MGP_129S1SvImJ_G0006889.1 mouse_genomes_project 5 157376921 157377230 - D730045B01Rik lincRNA lincRNA MGP_129S1SvImJ_T0074544.1 MGP_129S1SvImJ_G0030114.1 mouse_genomes_project 5 129392006 129482725 + MGP_129S1SvImJ_P0074544 Tmem132b protein_coding protein_coding MGP_129S1SvImJ_T0074545.1 MGP_129S1SvImJ_G0030114.1 mouse_genomes_project 5 129392617 129654287 + MGP_129S1SvImJ_P0074545 Tmem132b protein_coding protein_coding MGP_129S1SvImJ_T0074546.1 MGP_129S1SvImJ_G0030114.1 mouse_genomes_project 5 129482432 129567609 + Tmem132b protein_coding retained_intron MGP_129S1SvImJ_T0070581.1 MGP_129S1SvImJ_G0029372.1 mouse_genomes_project 5 26360357 26370774 - MGP_129S1SvImJ_P0070581 Shh protein_coding protein_coding MGP_129S1SvImJ_T0072266.1 MGP_129S1SvImJ_G0029649.1 mouse_genomes_project 5 77130786 77165289 - MGP_129S1SvImJ_P0072266 Ppat protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072267.1 MGP_129S1SvImJ_G0029649.1 mouse_genomes_project 5 77130813 77165295 - MGP_129S1SvImJ_P0072267 Ppat protein_coding protein_coding MGP_129S1SvImJ_T0072268.1 MGP_129S1SvImJ_G0029649.1 mouse_genomes_project 5 77132581 77164882 - Ppat protein_coding retained_intron MGP_129S1SvImJ_T0073681.1 MGP_129S1SvImJ_G0029967.1 mouse_genomes_project 5 118192179 118194522 + MGP_129S1SvImJ_P0073681 Triap1 protein_coding protein_coding MGP_129S1SvImJ_T0071250.1 MGP_129S1SvImJ_G0029475.1 mouse_genomes_project 5 33317782 33341977 + MGP_129S1SvImJ_P0071250 Dok7 protein_coding protein_coding MGP_129S1SvImJ_T0071251.1 MGP_129S1SvImJ_G0029475.1 mouse_genomes_project 5 33317878 33341977 + MGP_129S1SvImJ_P0071251 Dok7 protein_coding protein_coding MGP_129S1SvImJ_T0071252.1 MGP_129S1SvImJ_G0029475.1 mouse_genomes_project 5 33317904 33327518 + MGP_129S1SvImJ_P0071252 Dok7 protein_coding protein_coding MGP_129S1SvImJ_T0071253.1 MGP_129S1SvImJ_G0029475.1 mouse_genomes_project 5 33318093 33348852 + MGP_129S1SvImJ_P0071253 Dok7 protein_coding protein_coding MGP_129S1SvImJ_T0071254.1 MGP_129S1SvImJ_G0029475.1 mouse_genomes_project 5 33335970 33341977 + Dok7 protein_coding retained_intron MGP_129S1SvImJ_T0010718.1 MGP_129S1SvImJ_G0008834.1 mouse_genomes_project 5 101984639 101984715 - Gm23222 miRNA miRNA MGP_129S1SvImJ_T0072960.1 MGP_129S1SvImJ_G0029818.1 mouse_genomes_project 5 106695245 106754432 - MGP_129S1SvImJ_P0072960 Abcg3 protein_coding protein_coding MGP_129S1SvImJ_T0072961.1 MGP_129S1SvImJ_G0029818.1 mouse_genomes_project 5 106695867 106749544 - MGP_129S1SvImJ_P0072961 Abcg3 protein_coding protein_coding MGP_129S1SvImJ_T0004845.1 MGP_129S1SvImJ_G0004177.1 mouse_genomes_project 5 127062942 127075487 - Gm15860 antisense antisense MGP_129S1SvImJ_T0004846.1 MGP_129S1SvImJ_G0004177.1 mouse_genomes_project 5 127064552 127075589 - Gm15860 antisense antisense MGP_129S1SvImJ_T0004847.1 MGP_129S1SvImJ_G0004177.1 mouse_genomes_project 5 127064688 127073051 - Gm15860 antisense antisense MGP_129S1SvImJ_T0073199.1 MGP_129S1SvImJ_G0029867.1 mouse_genomes_project 5 110935630 111557966 - MGP_129S1SvImJ_P0073199 protein_coding protein_coding MGP_129S1SvImJ_T0015243.1 MGP_129S1SvImJ_G0013332.1 mouse_genomes_project 5 156170439 156170827 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075963.1 MGP_129S1SvImJ_G0030394.1 mouse_genomes_project 5 153666014 154048280 + MGP_129S1SvImJ_P0075963 Mtus2 protein_coding protein_coding MGP_129S1SvImJ_T0075964.1 MGP_129S1SvImJ_G0030394.1 mouse_genomes_project 5 153666036 153794487 + MGP_129S1SvImJ_P0075964 Mtus2 protein_coding protein_coding MGP_129S1SvImJ_T0075965.1 MGP_129S1SvImJ_G0030394.1 mouse_genomes_project 5 153800828 153958700 + Mtus2 protein_coding retained_intron MGP_129S1SvImJ_T0075966.1 MGP_129S1SvImJ_G0030394.1 mouse_genomes_project 5 153814892 153931640 + Mtus2 protein_coding processed_transcript MGP_129S1SvImJ_T0075967.1 MGP_129S1SvImJ_G0030394.1 mouse_genomes_project 5 153962019 153965199 + Mtus2 protein_coding retained_intron MGP_129S1SvImJ_T0075968.1 MGP_129S1SvImJ_G0030394.1 mouse_genomes_project 5 153990629 154046284 + MGP_129S1SvImJ_P0075968 Mtus2 protein_coding protein_coding MGP_129S1SvImJ_T0075969.1 MGP_129S1SvImJ_G0030394.1 mouse_genomes_project 5 153990700 154045947 + MGP_129S1SvImJ_P0075969 Mtus2 protein_coding protein_coding MGP_129S1SvImJ_T0075970.1 MGP_129S1SvImJ_G0030394.1 mouse_genomes_project 5 153990704 154045765 + MGP_129S1SvImJ_P0075970 Mtus2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075971.1 MGP_129S1SvImJ_G0030394.1 mouse_genomes_project 5 153990757 154046251 + MGP_129S1SvImJ_P0075971 Mtus2 protein_coding protein_coding MGP_129S1SvImJ_T0075972.1 MGP_129S1SvImJ_G0030394.1 mouse_genomes_project 5 154032189 154045673 + MGP_129S1SvImJ_P0075972 Mtus2 protein_coding protein_coding MGP_129S1SvImJ_T0075973.1 MGP_129S1SvImJ_G0030394.1 mouse_genomes_project 5 154032198 154046213 + MGP_129S1SvImJ_P0075973 Mtus2 protein_coding protein_coding MGP_129S1SvImJ_T0101195.1 MGP_129S1SvImJ_G0039262.1 mouse_genomes_project 5 68374020 68374147 - Gm23605 snoRNA snoRNA MGP_129S1SvImJ_T0004647.1 MGP_129S1SvImJ_G0004028.1 mouse_genomes_project 5 438831 439565 - Gm43825 antisense antisense MGP_129S1SvImJ_T0008181.1 MGP_129S1SvImJ_G0006670.1 mouse_genomes_project 5 75057713 75075607 + Gm6116 lincRNA lincRNA MGP_129S1SvImJ_T0014870.1 MGP_129S1SvImJ_G0012959.1 mouse_genomes_project 5 4376414 4377415 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015117.1 MGP_129S1SvImJ_G0013206.1 mouse_genomes_project 5 106758633 106759140 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001746.1 MGP_129S1SvImJ_G0001661.1 mouse_genomes_project 5 99338002 99339559 - TEC TEC MGP_129S1SvImJ_T0001845.1 MGP_129S1SvImJ_G0001760.1 mouse_genomes_project 5 128104109 128105424 - TEC TEC MGP_129S1SvImJ_T0001869.1 MGP_129S1SvImJ_G0001783.1 mouse_genomes_project 5 135171647 135173423 - TEC TEC MGP_129S1SvImJ_T0075537.1 MGP_129S1SvImJ_G0030301.1 mouse_genomes_project 5 145662760 145664707 - MGP_129S1SvImJ_P0075537 Grifin protein_coding protein_coding MGP_129S1SvImJ_T0102553.1 MGP_129S1SvImJ_G0040386.1 mouse_genomes_project 5 231943 232120 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0075104.1 MGP_129S1SvImJ_G0030213.1 mouse_genomes_project 5 141692120 141701758 + MGP_129S1SvImJ_P0075104 Plod3 protein_coding protein_coding MGP_129S1SvImJ_T0075105.1 MGP_129S1SvImJ_G0030213.1 mouse_genomes_project 5 141692479 141697199 + Plod3 protein_coding retained_intron MGP_129S1SvImJ_T0075106.1 MGP_129S1SvImJ_G0030213.1 mouse_genomes_project 5 141692577 141697816 + Plod3 protein_coding retained_intron MGP_129S1SvImJ_T0075107.1 MGP_129S1SvImJ_G0030213.1 mouse_genomes_project 5 141695416 141699290 + Plod3 protein_coding retained_intron MGP_129S1SvImJ_T0075108.1 MGP_129S1SvImJ_G0030213.1 mouse_genomes_project 5 141695612 141697199 + Plod3 protein_coding retained_intron MGP_129S1SvImJ_T0075109.1 MGP_129S1SvImJ_G0030213.1 mouse_genomes_project 5 141696734 141700288 + MGP_129S1SvImJ_P0075109 Plod3 protein_coding protein_coding MGP_129S1SvImJ_T0015112.1 MGP_129S1SvImJ_G0013201.1 mouse_genomes_project 5 105265120 105265696 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0071008.1 MGP_129S1SvImJ_G0029440.1 mouse_genomes_project 5 31169942 31179006 + MGP_129S1SvImJ_P0071008 Ywhah protein_coding protein_coding MGP_129S1SvImJ_T0071009.1 MGP_129S1SvImJ_G0029440.1 mouse_genomes_project 5 31170004 31172185 + Ywhah protein_coding retained_intron MGP_129S1SvImJ_T0074988.1 MGP_129S1SvImJ_G0030194.1 mouse_genomes_project 5 140565738 140581748 - MGP_129S1SvImJ_P0074988 Ssc4d protein_coding protein_coding MGP_129S1SvImJ_T0074989.1 MGP_129S1SvImJ_G0030194.1 mouse_genomes_project 5 140565750 140581714 - MGP_129S1SvImJ_P0074989 Ssc4d protein_coding protein_coding MGP_129S1SvImJ_T0074990.1 MGP_129S1SvImJ_G0030194.1 mouse_genomes_project 5 140565751 140567852 - MGP_129S1SvImJ_P0074990 Ssc4d protein_coding protein_coding MGP_129S1SvImJ_T0074991.1 MGP_129S1SvImJ_G0030194.1 mouse_genomes_project 5 140566346 140567796 - MGP_129S1SvImJ_P0074991 Ssc4d protein_coding protein_coding MGP_129S1SvImJ_T0074992.1 MGP_129S1SvImJ_G0030194.1 mouse_genomes_project 5 140568736 140571391 - MGP_129S1SvImJ_P0074992 Ssc4d protein_coding protein_coding MGP_129S1SvImJ_T0074993.1 MGP_129S1SvImJ_G0030194.1 mouse_genomes_project 5 140568946 140575147 - MGP_129S1SvImJ_P0074993 Ssc4d protein_coding protein_coding MGP_129S1SvImJ_T0074994.1 MGP_129S1SvImJ_G0030194.1 mouse_genomes_project 5 140571655 140581657 - MGP_129S1SvImJ_P0074994 Ssc4d protein_coding protein_coding MGP_129S1SvImJ_T0001506.1 MGP_129S1SvImJ_G0001426.1 mouse_genomes_project 5 27923706 27927704 - TEC TEC MGP_129S1SvImJ_T0070242.1 MGP_129S1SvImJ_G0029303.1 mouse_genomes_project 5 14854027 14858815 + MGP_129S1SvImJ_P0070242 protein_coding protein_coding MGP_129S1SvImJ_T0008076.1 MGP_129S1SvImJ_G0006594.1 mouse_genomes_project 5 23296189 23298661 + 4831440E17Rik lincRNA lincRNA MGP_129S1SvImJ_T0069952.1 MGP_129S1SvImJ_G0029256.1 mouse_genomes_project 5 356923 383323 + MGP_129S1SvImJ_P0069952 Fam133b protein_coding protein_coding MGP_129S1SvImJ_T0069953.1 MGP_129S1SvImJ_G0029256.1 mouse_genomes_project 5 356926 374135 + Fam133b protein_coding retained_intron MGP_129S1SvImJ_T0069954.1 MGP_129S1SvImJ_G0029256.1 mouse_genomes_project 5 356928 382825 + MGP_129S1SvImJ_P0069954 Fam133b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069955.1 MGP_129S1SvImJ_G0029256.1 mouse_genomes_project 5 356928 382825 + MGP_129S1SvImJ_P0069955 Fam133b protein_coding protein_coding MGP_129S1SvImJ_T0069956.1 MGP_129S1SvImJ_G0029256.1 mouse_genomes_project 5 356934 382898 + Fam133b protein_coding retained_intron MGP_129S1SvImJ_T0069957.1 MGP_129S1SvImJ_G0029256.1 mouse_genomes_project 5 372750 377806 + Fam133b protein_coding retained_intron MGP_129S1SvImJ_T0069958.1 MGP_129S1SvImJ_G0029256.1 mouse_genomes_project 5 378121 378813 + Fam133b protein_coding retained_intron MGP_129S1SvImJ_T0069959.1 MGP_129S1SvImJ_G0029256.1 mouse_genomes_project 5 379924 382116 + Fam133b protein_coding retained_intron MGP_129S1SvImJ_T0073670.1 MGP_129S1SvImJ_G0029964.1 mouse_genomes_project 5 118146544 118150433 - MGP_129S1SvImJ_P0073670 Dynll1 protein_coding protein_coding MGP_129S1SvImJ_T0073671.1 MGP_129S1SvImJ_G0029964.1 mouse_genomes_project 5 118147858 118150097 - Dynll1 protein_coding retained_intron MGP_129S1SvImJ_T0073672.1 MGP_129S1SvImJ_G0029964.1 mouse_genomes_project 5 118147867 118148872 - Dynll1 protein_coding processed_transcript MGP_129S1SvImJ_T0073673.1 MGP_129S1SvImJ_G0029964.1 mouse_genomes_project 5 118147941 118150346 - MGP_129S1SvImJ_P0073673 Dynll1 protein_coding protein_coding MGP_129S1SvImJ_T0073674.1 MGP_129S1SvImJ_G0029964.1 mouse_genomes_project 5 118148992 118150313 - Dynll1 protein_coding processed_transcript MGP_129S1SvImJ_T0073675.1 MGP_129S1SvImJ_G0029964.1 mouse_genomes_project 5 118149710 118150368 - Dynll1 protein_coding retained_intron MGP_129S1SvImJ_T0004643.1 MGP_129S1SvImJ_G0004025.1 mouse_genomes_project 5 277775 285629 - Gm17590 antisense antisense MGP_129S1SvImJ_T0004644.1 MGP_129S1SvImJ_G0004025.1 mouse_genomes_project 5 277985 278093 - Gm17590 antisense antisense MGP_129S1SvImJ_T0074899.1 MGP_129S1SvImJ_G0030175.1 mouse_genomes_project 5 139651239 139667266 + MGP_129S1SvImJ_P0074899 Tbl2 protein_coding protein_coding MGP_129S1SvImJ_T0074900.1 MGP_129S1SvImJ_G0030175.1 mouse_genomes_project 5 139651268 139661327 + MGP_129S1SvImJ_P0074900 Tbl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074901.1 MGP_129S1SvImJ_G0030175.1 mouse_genomes_project 5 139651268 139659155 + MGP_129S1SvImJ_P0074901 Tbl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074902.1 MGP_129S1SvImJ_G0030175.1 mouse_genomes_project 5 139651273 139655985 + MGP_129S1SvImJ_P0074902 Tbl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074903.1 MGP_129S1SvImJ_G0030175.1 mouse_genomes_project 5 139654300 139659193 + MGP_129S1SvImJ_P0074903 Tbl2 protein_coding protein_coding MGP_129S1SvImJ_T0004700.1 MGP_129S1SvImJ_G0004072.1 mouse_genomes_project 5 42746512 42748584 + Gm16401 antisense antisense MGP_129S1SvImJ_T0004701.1 MGP_129S1SvImJ_G0004072.1 mouse_genomes_project 5 42746512 42748586 + Gm16401 antisense antisense MGP_129S1SvImJ_T0075292.1 MGP_129S1SvImJ_G0030249.1 mouse_genomes_project 5 142683168 142711847 - MGP_129S1SvImJ_P0075292 Cyp3a13 protein_coding protein_coding MGP_129S1SvImJ_T0014979.1 MGP_129S1SvImJ_G0013068.1 mouse_genomes_project 5 41118784 41119218 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008466.1 MGP_129S1SvImJ_G0006870.1 mouse_genomes_project 5 154798642 154804407 + Gm15408 lincRNA lincRNA MGP_129S1SvImJ_T0073349.1 MGP_129S1SvImJ_G0029900.1 mouse_genomes_project 5 114819489 114825489 - MGP_129S1SvImJ_P0073349 Cryba4 protein_coding protein_coding MGP_129S1SvImJ_T0073350.1 MGP_129S1SvImJ_G0029900.1 mouse_genomes_project 5 114819490 114824145 - MGP_129S1SvImJ_P0073350 Cryba4 protein_coding protein_coding MGP_129S1SvImJ_T0073351.1 MGP_129S1SvImJ_G0029900.1 mouse_genomes_project 5 114819529 114824785 - MGP_129S1SvImJ_P0073351 Cryba4 protein_coding protein_coding MGP_129S1SvImJ_T0001717.1 MGP_129S1SvImJ_G0001632.1 mouse_genomes_project 5 74513053 74514653 - TEC TEC MGP_129S1SvImJ_T0004788.1 MGP_129S1SvImJ_G0004136.1 mouse_genomes_project 5 112672868 112673462 - Gm43137 antisense antisense MGP_129S1SvImJ_T0001508.1 MGP_129S1SvImJ_G0001428.1 mouse_genomes_project 5 28855091 28858434 + TEC TEC MGP_129S1SvImJ_T0015197.1 MGP_129S1SvImJ_G0013286.1 mouse_genomes_project 5 142686987 142687195 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001606.1 MGP_129S1SvImJ_G0001523.1 mouse_genomes_project 5 50423234 50425048 - TEC TEC MGP_129S1SvImJ_T0010680.1 MGP_129S1SvImJ_G0008796.1 mouse_genomes_project 5 513154 513222 + Gm22926 miRNA miRNA MGP_129S1SvImJ_T0070733.1 MGP_129S1SvImJ_G0029399.1 mouse_genomes_project 5 28864640 28866544 - MGP_129S1SvImJ_P0070733 Ost4 protein_coding protein_coding MGP_129S1SvImJ_T0070734.1 MGP_129S1SvImJ_G0029399.1 mouse_genomes_project 5 28865273 28866481 - MGP_129S1SvImJ_P0070734 Ost4 protein_coding protein_coding MGP_129S1SvImJ_T0004649.1 MGP_129S1SvImJ_G0004030.1 mouse_genomes_project 5 2712225 2713920 + antisense antisense MGP_129S1SvImJ_T0072716.1 MGP_129S1SvImJ_G0029762.1 mouse_genomes_project 5 97175083 97179202 + MGP_129S1SvImJ_P0072716 Cxcl13 protein_coding protein_coding MGP_129S1SvImJ_T0073643.1 MGP_129S1SvImJ_G0029960.1 mouse_genomes_project 5 118006963 118034626 - MGP_129S1SvImJ_P0073643 Cabp1 protein_coding protein_coding MGP_129S1SvImJ_T0073644.1 MGP_129S1SvImJ_G0029960.1 mouse_genomes_project 5 118006963 118026572 - MGP_129S1SvImJ_P0073644 Cabp1 protein_coding protein_coding MGP_129S1SvImJ_T0073645.1 MGP_129S1SvImJ_G0029960.1 mouse_genomes_project 5 118006988 118021695 - Cabp1 protein_coding processed_transcript MGP_129S1SvImJ_T0073646.1 MGP_129S1SvImJ_G0029960.1 mouse_genomes_project 5 118007220 118026389 - MGP_129S1SvImJ_P0073646 Cabp1 protein_coding protein_coding MGP_129S1SvImJ_T0073647.1 MGP_129S1SvImJ_G0029960.1 mouse_genomes_project 5 118007245 118026326 - MGP_129S1SvImJ_P0073647 Cabp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073648.1 MGP_129S1SvImJ_G0029960.1 mouse_genomes_project 5 118012672 118021532 - Cabp1 protein_coding retained_intron MGP_129S1SvImJ_T0073649.1 MGP_129S1SvImJ_G0029960.1 mouse_genomes_project 5 118019874 118024420 - Cabp1 protein_coding retained_intron MGP_129S1SvImJ_T0001691.1 MGP_129S1SvImJ_G0001607.1 mouse_genomes_project 5 68786678 68789594 - TEC TEC MGP_129S1SvImJ_T0008081.1 MGP_129S1SvImJ_G0006598.1 mouse_genomes_project 5 24291256 24322216 - 4930584F24Rik lincRNA lincRNA MGP_129S1SvImJ_T0008082.1 MGP_129S1SvImJ_G0006598.1 mouse_genomes_project 5 24291258 24322241 - 4930584F24Rik lincRNA lincRNA MGP_129S1SvImJ_T0008083.1 MGP_129S1SvImJ_G0006598.1 mouse_genomes_project 5 24291260 24322205 - 4930584F24Rik lincRNA lincRNA MGP_129S1SvImJ_T0008084.1 MGP_129S1SvImJ_G0006598.1 mouse_genomes_project 5 24303860 24322216 - 4930584F24Rik lincRNA lincRNA MGP_129S1SvImJ_T0001787.1 MGP_129S1SvImJ_G0001702.1 mouse_genomes_project 5 115781582 115781963 + TEC TEC MGP_129S1SvImJ_T0018175.1 MGP_129S1SvImJ_G0015598.1 mouse_genomes_project 5 51149365 51154429 + 9230114K14Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018176.1 MGP_129S1SvImJ_G0015598.1 mouse_genomes_project 5 51149372 51244629 + 9230114K14Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018177.1 MGP_129S1SvImJ_G0015598.1 mouse_genomes_project 5 51149372 51157906 + 9230114K14Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018178.1 MGP_129S1SvImJ_G0015598.1 mouse_genomes_project 5 51149406 51211806 + 9230114K14Rik processed_transcript lincRNA MGP_129S1SvImJ_T0071405.1 MGP_129S1SvImJ_G0029505.1 mouse_genomes_project 5 36443617 36542152 + MGP_129S1SvImJ_P0071405 Stx18 protein_coding protein_coding MGP_129S1SvImJ_T0071406.1 MGP_129S1SvImJ_G0029505.1 mouse_genomes_project 5 36443635 36542158 + MGP_129S1SvImJ_P0071406 Stx18 protein_coding protein_coding MGP_129S1SvImJ_T0071407.1 MGP_129S1SvImJ_G0029505.1 mouse_genomes_project 5 36443666 36522744 + MGP_129S1SvImJ_P0071407 Stx18 protein_coding protein_coding MGP_129S1SvImJ_T0071408.1 MGP_129S1SvImJ_G0029505.1 mouse_genomes_project 5 36443716 36542162 + MGP_129S1SvImJ_P0071408 Stx18 protein_coding protein_coding MGP_129S1SvImJ_T0071409.1 MGP_129S1SvImJ_G0029505.1 mouse_genomes_project 5 36483174 36534597 + MGP_129S1SvImJ_P0071409 Stx18 protein_coding protein_coding MGP_129S1SvImJ_T0071410.1 MGP_129S1SvImJ_G0029505.1 mouse_genomes_project 5 36517647 36527823 + Stx18 protein_coding processed_transcript MGP_129S1SvImJ_T0071411.1 MGP_129S1SvImJ_G0029505.1 mouse_genomes_project 5 36527432 36534623 + Stx18 protein_coding retained_intron MGP_129S1SvImJ_T0015177.1 MGP_129S1SvImJ_G0013266.1 mouse_genomes_project 5 129288780 129289477 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0074380.1 MGP_129S1SvImJ_G0030088.1 mouse_genomes_project 5 127897295 127900060 + Ogfod2 protein_coding retained_intron MGP_129S1SvImJ_T0074381.1 MGP_129S1SvImJ_G0030088.1 mouse_genomes_project 5 127897299 127899481 + MGP_129S1SvImJ_P0074381 Ogfod2 protein_coding protein_coding MGP_129S1SvImJ_T0074382.1 MGP_129S1SvImJ_G0030088.1 mouse_genomes_project 5 127897312 127899953 + MGP_129S1SvImJ_P0074382 Ogfod2 protein_coding protein_coding MGP_129S1SvImJ_T0074383.1 MGP_129S1SvImJ_G0030088.1 mouse_genomes_project 5 127897314 127899349 + Ogfod2 protein_coding retained_intron MGP_129S1SvImJ_T0074384.1 MGP_129S1SvImJ_G0030088.1 mouse_genomes_project 5 127897314 127899437 + MGP_129S1SvImJ_P0074384 Ogfod2 protein_coding protein_coding MGP_129S1SvImJ_T0074385.1 MGP_129S1SvImJ_G0030088.1 mouse_genomes_project 5 127897331 127899741 + MGP_129S1SvImJ_P0074385 Ogfod2 protein_coding protein_coding MGP_129S1SvImJ_T0074386.1 MGP_129S1SvImJ_G0030088.1 mouse_genomes_project 5 127897405 127899942 + MGP_129S1SvImJ_P0074386 Ogfod2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074387.1 MGP_129S1SvImJ_G0030088.1 mouse_genomes_project 5 127897789 127899192 + Ogfod2 protein_coding retained_intron MGP_129S1SvImJ_T0074388.1 MGP_129S1SvImJ_G0030088.1 mouse_genomes_project 5 127898277 127899857 + Ogfod2 protein_coding retained_intron MGP_129S1SvImJ_T0075336.1 MGP_129S1SvImJ_G0030259.1 mouse_genomes_project 5 142974578 142983162 - MGP_129S1SvImJ_P0075336 Taf6 protein_coding protein_coding MGP_129S1SvImJ_T0075337.1 MGP_129S1SvImJ_G0030259.1 mouse_genomes_project 5 142974578 142983387 - MGP_129S1SvImJ_P0075337 Taf6 protein_coding protein_coding MGP_129S1SvImJ_T0075338.1 MGP_129S1SvImJ_G0030259.1 mouse_genomes_project 5 142974581 142983141 - MGP_129S1SvImJ_P0075338 Taf6 protein_coding protein_coding MGP_129S1SvImJ_T0075339.1 MGP_129S1SvImJ_G0030259.1 mouse_genomes_project 5 142974589 142983157 - MGP_129S1SvImJ_P0075339 Taf6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075340.1 MGP_129S1SvImJ_G0030259.1 mouse_genomes_project 5 142976095 142977401 - Taf6 protein_coding retained_intron MGP_129S1SvImJ_T0075341.1 MGP_129S1SvImJ_G0030259.1 mouse_genomes_project 5 142978606 142983162 - MGP_129S1SvImJ_P0075341 Taf6 protein_coding protein_coding MGP_129S1SvImJ_T0075342.1 MGP_129S1SvImJ_G0030259.1 mouse_genomes_project 5 142979868 142983151 - MGP_129S1SvImJ_P0075342 Taf6 protein_coding protein_coding MGP_129S1SvImJ_T0075343.1 MGP_129S1SvImJ_G0030259.1 mouse_genomes_project 5 142982011 142983152 - Taf6 protein_coding processed_transcript MGP_129S1SvImJ_T0008431.1 MGP_129S1SvImJ_G0006840.1 mouse_genomes_project 5 142999652 143003544 - Gm454 lincRNA lincRNA MGP_129S1SvImJ_T0070488.1 MGP_129S1SvImJ_G0029350.1 mouse_genomes_project 5 22311658 22323766 - MGP_129S1SvImJ_P0070488 Abcf2 protein_coding protein_coding MGP_129S1SvImJ_T0072298.1 MGP_129S1SvImJ_G0029657.1 mouse_genomes_project 5 77564136 77582993 - MGP_129S1SvImJ_P0072298 Noa1 protein_coding protein_coding MGP_129S1SvImJ_T0072299.1 MGP_129S1SvImJ_G0029657.1 mouse_genomes_project 5 77574869 77575786 - Noa1 protein_coding processed_transcript MGP_129S1SvImJ_T0072300.1 MGP_129S1SvImJ_G0029657.1 mouse_genomes_project 5 77576450 77582968 - Noa1 protein_coding retained_intron MGP_129S1SvImJ_T0072301.1 MGP_129S1SvImJ_G0029657.1 mouse_genomes_project 5 77578515 77580552 - Noa1 protein_coding processed_transcript MGP_129S1SvImJ_T0010740.1 MGP_129S1SvImJ_G0008856.1 mouse_genomes_project 5 140314063 140314147 - Mir7034 miRNA miRNA MGP_129S1SvImJ_T0014878.1 MGP_129S1SvImJ_G0012967.1 mouse_genomes_project 5 7183004 7184469 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015090.1 MGP_129S1SvImJ_G0013179.1 mouse_genomes_project 5 92903032 92903905 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075460.1 MGP_129S1SvImJ_G0030281.1 mouse_genomes_project 5 144323727 144325721 + Cyp2w1 protein_coding retained_intron MGP_129S1SvImJ_T0075461.1 MGP_129S1SvImJ_G0030281.1 mouse_genomes_project 5 144323727 144328132 + MGP_129S1SvImJ_P0075461 Cyp2w1 protein_coding protein_coding MGP_129S1SvImJ_T0075462.1 MGP_129S1SvImJ_G0030281.1 mouse_genomes_project 5 144325674 144327766 + MGP_129S1SvImJ_P0075462 Cyp2w1 protein_coding protein_coding MGP_129S1SvImJ_T0073200.1 MGP_129S1SvImJ_G0029868.1 mouse_genomes_project 5 111194535 111267452 - MGP_129S1SvImJ_P0073200 protein_coding protein_coding MGP_129S1SvImJ_T0072564.1 MGP_129S1SvImJ_G0029727.1 mouse_genomes_project 5 91859425 91860971 + MGP_129S1SvImJ_P0072564 Ppbp protein_coding protein_coding MGP_129S1SvImJ_T0099923.1 MGP_129S1SvImJ_G0037990.1 mouse_genomes_project 5 69229848 69229955 - Gm23932 snRNA snRNA MGP_129S1SvImJ_T0014943.1 MGP_129S1SvImJ_G0013032.1 mouse_genomes_project 5 27663199 27663578 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015149.1 MGP_129S1SvImJ_G0013238.1 mouse_genomes_project 5 113387135 113387633 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098759.1 MGP_129S1SvImJ_G0036844.1 mouse_genomes_project 5 127257180 127257317 + Gm24682 scaRNA scaRNA MGP_129S1SvImJ_T0072276.1 MGP_129S1SvImJ_G0029651.1 mouse_genomes_project 5 77188366 77216704 + MGP_129S1SvImJ_P0072276 Srp72 protein_coding protein_coding MGP_129S1SvImJ_T0072277.1 MGP_129S1SvImJ_G0029651.1 mouse_genomes_project 5 77188390 77215583 + MGP_129S1SvImJ_P0072277 Srp72 protein_coding protein_coding MGP_129S1SvImJ_T0072278.1 MGP_129S1SvImJ_G0029651.1 mouse_genomes_project 5 77188404 77195154 + Srp72 protein_coding retained_intron MGP_129S1SvImJ_T0072279.1 MGP_129S1SvImJ_G0029651.1 mouse_genomes_project 5 77195142 77197278 + Srp72 protein_coding retained_intron MGP_129S1SvImJ_T0072280.1 MGP_129S1SvImJ_G0029651.1 mouse_genomes_project 5 77198658 77211913 + Srp72 protein_coding retained_intron MGP_129S1SvImJ_T0072281.1 MGP_129S1SvImJ_G0029651.1 mouse_genomes_project 5 77209702 77210613 + Srp72 protein_coding retained_intron MGP_129S1SvImJ_T0072282.1 MGP_129S1SvImJ_G0029651.1 mouse_genomes_project 5 77212023 77214256 + Srp72 protein_coding retained_intron MGP_129S1SvImJ_T0072283.1 MGP_129S1SvImJ_G0029651.1 mouse_genomes_project 5 77213740 77216704 + Srp72 protein_coding retained_intron MGP_129S1SvImJ_T0072284.1 MGP_129S1SvImJ_G0029651.1 mouse_genomes_project 5 77214171 77215108 + Srp72 protein_coding retained_intron MGP_129S1SvImJ_T0015083.1 MGP_129S1SvImJ_G0013172.1 mouse_genomes_project 5 89814621 89816251 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008417.1 MGP_129S1SvImJ_G0006829.1 mouse_genomes_project 5 137860571 137919854 - Gm42624 lincRNA lincRNA MGP_129S1SvImJ_T0073811.1 MGP_129S1SvImJ_G0029988.1 mouse_genomes_project 5 120464894 120477172 - MGP_129S1SvImJ_P0073811 Rfc5 protein_coding protein_coding MGP_129S1SvImJ_T0073812.1 MGP_129S1SvImJ_G0029988.1 mouse_genomes_project 5 120465196 120477147 - Rfc5 protein_coding retained_intron MGP_129S1SvImJ_T0073813.1 MGP_129S1SvImJ_G0029988.1 mouse_genomes_project 5 120467736 120468971 - Rfc5 protein_coding retained_intron MGP_129S1SvImJ_T0073814.1 MGP_129S1SvImJ_G0029988.1 mouse_genomes_project 5 120467960 120468336 - Rfc5 protein_coding retained_intron MGP_129S1SvImJ_T0073815.1 MGP_129S1SvImJ_G0029988.1 mouse_genomes_project 5 120469853 120474957 - Rfc5 protein_coding retained_intron MGP_129S1SvImJ_T0073816.1 MGP_129S1SvImJ_G0029988.1 mouse_genomes_project 5 120474406 120477170 - MGP_129S1SvImJ_P0073816 Rfc5 protein_coding protein_coding MGP_129S1SvImJ_T0004783.1 MGP_129S1SvImJ_G0004131.1 mouse_genomes_project 5 109435695 109464520 - Gm17202 antisense antisense MGP_129S1SvImJ_T0004654.1 MGP_129S1SvImJ_G0004035.1 mouse_genomes_project 5 11999490 12013602 - antisense antisense MGP_129S1SvImJ_T0074356.1 MGP_129S1SvImJ_G0030083.1 mouse_genomes_project 5 127702203 127713847 + MGP_129S1SvImJ_P0074356 Gm43518 protein_coding protein_coding MGP_129S1SvImJ_T0075564.1 MGP_129S1SvImJ_G0030306.1 mouse_genomes_project 5 145840270 145844488 + Amz1 protein_coding processed_transcript MGP_129S1SvImJ_T0075565.1 MGP_129S1SvImJ_G0030306.1 mouse_genomes_project 5 145840270 145879641 + MGP_129S1SvImJ_P0075565 Amz1 protein_coding protein_coding MGP_129S1SvImJ_T0075566.1 MGP_129S1SvImJ_G0030306.1 mouse_genomes_project 5 145840281 145840941 + Amz1 protein_coding processed_transcript MGP_129S1SvImJ_T0075567.1 MGP_129S1SvImJ_G0030306.1 mouse_genomes_project 5 145857676 145881022 + MGP_129S1SvImJ_P0075567 Amz1 protein_coding protein_coding MGP_129S1SvImJ_T0075568.1 MGP_129S1SvImJ_G0030306.1 mouse_genomes_project 5 145857717 145863424 + Amz1 protein_coding processed_transcript MGP_129S1SvImJ_T0075569.1 MGP_129S1SvImJ_G0030306.1 mouse_genomes_project 5 145868275 145874549 + Amz1 protein_coding retained_intron MGP_129S1SvImJ_T0075570.1 MGP_129S1SvImJ_G0030306.1 mouse_genomes_project 5 145875624 145887770 + MGP_129S1SvImJ_P0075570 Amz1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071378.1 MGP_129S1SvImJ_G0029499.1 mouse_genomes_project 5 35590168 35619854 + MGP_129S1SvImJ_P0071378 Crmp1 protein_coding protein_coding MGP_129S1SvImJ_T0071379.1 MGP_129S1SvImJ_G0029499.1 mouse_genomes_project 5 35590308 35644602 + MGP_129S1SvImJ_P0071379 Crmp1 protein_coding protein_coding MGP_129S1SvImJ_T0071380.1 MGP_129S1SvImJ_G0029499.1 mouse_genomes_project 5 35590962 35629229 + MGP_129S1SvImJ_P0071380 Crmp1 protein_coding protein_coding MGP_129S1SvImJ_T0071381.1 MGP_129S1SvImJ_G0029499.1 mouse_genomes_project 5 35593992 35644570 + MGP_129S1SvImJ_P0071381 Crmp1 protein_coding protein_coding MGP_129S1SvImJ_T0071382.1 MGP_129S1SvImJ_G0029499.1 mouse_genomes_project 5 35594073 35616631 + Crmp1 protein_coding retained_intron MGP_129S1SvImJ_T0071383.1 MGP_129S1SvImJ_G0029499.1 mouse_genomes_project 5 35596759 35629968 + MGP_129S1SvImJ_P0071383 Crmp1 protein_coding protein_coding MGP_129S1SvImJ_T0071384.1 MGP_129S1SvImJ_G0029499.1 mouse_genomes_project 5 35619809 35627817 + Crmp1 protein_coding retained_intron MGP_129S1SvImJ_T0071385.1 MGP_129S1SvImJ_G0029499.1 mouse_genomes_project 5 35630843 35634263 + Crmp1 protein_coding retained_intron MGP_129S1SvImJ_T0071386.1 MGP_129S1SvImJ_G0029499.1 mouse_genomes_project 5 35631503 35633771 + Crmp1 protein_coding retained_intron MGP_129S1SvImJ_T0071387.1 MGP_129S1SvImJ_G0029499.1 mouse_genomes_project 5 35634964 35639131 + Crmp1 protein_coding retained_intron MGP_129S1SvImJ_T0008340.1 MGP_129S1SvImJ_G0006781.1 mouse_genomes_project 5 120477263 120481627 + Gm15728 lincRNA lincRNA MGP_129S1SvImJ_T0008341.1 MGP_129S1SvImJ_G0006781.1 mouse_genomes_project 5 120477339 120478714 + Gm15728 lincRNA lincRNA MGP_129S1SvImJ_T0015052.1 MGP_129S1SvImJ_G0013141.1 mouse_genomes_project 5 75472864 75474254 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014900.1 MGP_129S1SvImJ_G0012989.1 mouse_genomes_project 5 18656281 18657677 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070473.1 MGP_129S1SvImJ_G0029346.1 mouse_genomes_project 5 22184165 22237771 + MGP_129S1SvImJ_P0070473 Agap3 protein_coding protein_coding MGP_129S1SvImJ_T0070474.1 MGP_129S1SvImJ_G0029346.1 mouse_genomes_project 5 22184195 22218903 + MGP_129S1SvImJ_P0070474 Agap3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0070475.1 MGP_129S1SvImJ_G0029346.1 mouse_genomes_project 5 22184322 22218039 + Agap3 protein_coding processed_transcript MGP_129S1SvImJ_T0070476.1 MGP_129S1SvImJ_G0029346.1 mouse_genomes_project 5 22208222 22218895 + MGP_129S1SvImJ_P0070476 Agap3 protein_coding protein_coding MGP_129S1SvImJ_T0070477.1 MGP_129S1SvImJ_G0029346.1 mouse_genomes_project 5 22213780 22237761 + MGP_129S1SvImJ_P0070477 Agap3 protein_coding protein_coding MGP_129S1SvImJ_T0070478.1 MGP_129S1SvImJ_G0029346.1 mouse_genomes_project 5 22214199 22218893 + Agap3 protein_coding processed_transcript MGP_129S1SvImJ_T0015124.1 MGP_129S1SvImJ_G0013213.1 mouse_genomes_project 5 108577981 108578723 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075163.1 MGP_129S1SvImJ_G0030225.1 mouse_genomes_project 5 142087354 142111812 + MGP_129S1SvImJ_P0075163 Ephb4 protein_coding protein_coding MGP_129S1SvImJ_T0075164.1 MGP_129S1SvImJ_G0030225.1 mouse_genomes_project 5 142087386 142119516 + MGP_129S1SvImJ_P0075164 Ephb4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075165.1 MGP_129S1SvImJ_G0030225.1 mouse_genomes_project 5 142087417 142111804 + MGP_129S1SvImJ_P0075165 Ephb4 protein_coding protein_coding MGP_129S1SvImJ_T0075166.1 MGP_129S1SvImJ_G0030225.1 mouse_genomes_project 5 142087675 142111596 + MGP_129S1SvImJ_P0075166 Ephb4 protein_coding protein_coding MGP_129S1SvImJ_T0075167.1 MGP_129S1SvImJ_G0030225.1 mouse_genomes_project 5 142087758 142111816 + MGP_129S1SvImJ_P0075167 Ephb4 protein_coding protein_coding MGP_129S1SvImJ_T0071723.1 MGP_129S1SvImJ_G0029557.1 mouse_genomes_project 5 53085940 53216565 + MGP_129S1SvImJ_P0071723 Stim2 protein_coding protein_coding MGP_129S1SvImJ_T0071724.1 MGP_129S1SvImJ_G0029557.1 mouse_genomes_project 5 53086288 53216574 + MGP_129S1SvImJ_P0071724 Stim2 protein_coding protein_coding MGP_129S1SvImJ_T0071725.1 MGP_129S1SvImJ_G0029557.1 mouse_genomes_project 5 53168127 53198761 + Stim2 protein_coding processed_transcript MGP_129S1SvImJ_T0071726.1 MGP_129S1SvImJ_G0029557.1 mouse_genomes_project 5 53211364 53214095 + Stim2 protein_coding retained_intron MGP_129S1SvImJ_T0075501.1 MGP_129S1SvImJ_G0030291.1 mouse_genomes_project 5 144820431 144831162 - MGP_129S1SvImJ_P0075501 Tmem184a protein_coding protein_coding MGP_129S1SvImJ_T0075502.1 MGP_129S1SvImJ_G0030291.1 mouse_genomes_project 5 144822900 144834022 - MGP_129S1SvImJ_P0075502 Tmem184a protein_coding protein_coding MGP_129S1SvImJ_T0075503.1 MGP_129S1SvImJ_G0030291.1 mouse_genomes_project 5 144825215 144825929 - Tmem184a protein_coding retained_intron MGP_129S1SvImJ_T0075505.1 MGP_129S1SvImJ_G0030291.1 mouse_genomes_project 5 144826438 144833781 - MGP_129S1SvImJ_P0075505 Tmem184a protein_coding protein_coding MGP_129S1SvImJ_T0075506.1 MGP_129S1SvImJ_G0030291.1 mouse_genomes_project 5 144830926 144839520 - MGP_129S1SvImJ_P0075506 Tmem184a protein_coding protein_coding MGP_129S1SvImJ_T0073229.1 MGP_129S1SvImJ_G0029879.1 mouse_genomes_project 5 112540650 112541487 - MGP_129S1SvImJ_P0073229 protein_coding protein_coding MGP_129S1SvImJ_T0071662.1 MGP_129S1SvImJ_G0029548.1 mouse_genomes_project 5 51736169 51766478 + MGP_129S1SvImJ_P0071662 Pi4k2b protein_coding protein_coding MGP_129S1SvImJ_T0071663.1 MGP_129S1SvImJ_G0029548.1 mouse_genomes_project 5 51736201 51746049 + MGP_129S1SvImJ_P0071663 Pi4k2b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071664.1 MGP_129S1SvImJ_G0029548.1 mouse_genomes_project 5 51736205 51766478 + MGP_129S1SvImJ_P0071664 Pi4k2b protein_coding protein_coding MGP_129S1SvImJ_T0071665.1 MGP_129S1SvImJ_G0029548.1 mouse_genomes_project 5 51749137 51752019 + Pi4k2b protein_coding retained_intron MGP_129S1SvImJ_T0014990.1 MGP_129S1SvImJ_G0013079.1 mouse_genomes_project 5 48409265 48411946 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072744.1 MGP_129S1SvImJ_G0029767.1 mouse_genomes_project 5 98274070 98369359 + MGP_129S1SvImJ_P0072744 Bmp2k protein_coding protein_coding MGP_129S1SvImJ_T0072745.1 MGP_129S1SvImJ_G0029767.1 mouse_genomes_project 5 98274070 98346622 + MGP_129S1SvImJ_P0072745 Bmp2k protein_coding protein_coding MGP_129S1SvImJ_T0072746.1 MGP_129S1SvImJ_G0029767.1 mouse_genomes_project 5 98274309 98345567 + MGP_129S1SvImJ_P0072746 Bmp2k protein_coding unknown_likely_coding MGP_129S1SvImJ_T0004905.1 MGP_129S1SvImJ_G0004218.1 mouse_genomes_project 5 149573126 149577739 - 2900089D17Rik antisense antisense MGP_129S1SvImJ_T0004906.1 MGP_129S1SvImJ_G0004218.1 mouse_genomes_project 5 149573213 149587174 - 2900089D17Rik antisense antisense MGP_129S1SvImJ_T0001782.1 MGP_129S1SvImJ_G0001697.1 mouse_genomes_project 5 114944066 114945327 + TEC TEC MGP_129S1SvImJ_T0001781.1 MGP_129S1SvImJ_G0001696.1 mouse_genomes_project 5 113921065 113923188 + TEC TEC MGP_129S1SvImJ_T0075760.1 MGP_129S1SvImJ_G0030348.1 mouse_genomes_project 5 149575774 149596911 + MGP_129S1SvImJ_P0075760 Bri3 protein_coding protein_coding MGP_129S1SvImJ_T0075761.1 MGP_129S1SvImJ_G0030348.1 mouse_genomes_project 5 149586364 149597090 + MGP_129S1SvImJ_P0075761 Bri3 protein_coding protein_coding MGP_129S1SvImJ_T0075762.1 MGP_129S1SvImJ_G0030348.1 mouse_genomes_project 5 149586364 149798910 + MGP_129S1SvImJ_P0075762 Bri3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0008271.1 MGP_129S1SvImJ_G0006740.1 mouse_genomes_project 5 109708076 109733758 - Gm26692 lincRNA lincRNA MGP_129S1SvImJ_T0098957.1 MGP_129S1SvImJ_G0037035.1 mouse_genomes_project 5 93933305 93934543 + Gm20500 sense_intronic sense_intronic MGP_129S1SvImJ_T0071674.1 MGP_129S1SvImJ_G0029550.1 mouse_genomes_project 5 51835684 51873112 + MGP_129S1SvImJ_P0071674 Anapc4 protein_coding protein_coding MGP_129S1SvImJ_T0071675.1 MGP_129S1SvImJ_G0029550.1 mouse_genomes_project 5 51835798 51872057 + MGP_129S1SvImJ_P0071675 Anapc4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071676.1 MGP_129S1SvImJ_G0029550.1 mouse_genomes_project 5 51846632 51852539 + Anapc4 protein_coding retained_intron MGP_129S1SvImJ_T0071677.1 MGP_129S1SvImJ_G0029550.1 mouse_genomes_project 5 51846748 51854438 + MGP_129S1SvImJ_P0071677 Anapc4 protein_coding protein_coding MGP_129S1SvImJ_T0071678.1 MGP_129S1SvImJ_G0029550.1 mouse_genomes_project 5 51846761 51854425 + MGP_129S1SvImJ_P0071678 Anapc4 protein_coding protein_coding MGP_129S1SvImJ_T0071679.1 MGP_129S1SvImJ_G0029550.1 mouse_genomes_project 5 51851476 51852614 + Anapc4 protein_coding retained_intron MGP_129S1SvImJ_T0071680.1 MGP_129S1SvImJ_G0029550.1 mouse_genomes_project 5 51854062 51864481 + Anapc4 protein_coding retained_intron MGP_129S1SvImJ_T0071681.1 MGP_129S1SvImJ_G0029550.1 mouse_genomes_project 5 51860021 51862285 + Anapc4 protein_coding retained_intron MGP_129S1SvImJ_T0071682.1 MGP_129S1SvImJ_G0029550.1 mouse_genomes_project 5 51864373 51871311 + Anapc4 protein_coding retained_intron MGP_129S1SvImJ_T0071683.1 MGP_129S1SvImJ_G0029550.1 mouse_genomes_project 5 51866227 51867864 + Anapc4 protein_coding retained_intron MGP_129S1SvImJ_T0071684.1 MGP_129S1SvImJ_G0029550.1 mouse_genomes_project 5 51866469 51869969 + Anapc4 protein_coding retained_intron MGP_129S1SvImJ_T0071685.1 MGP_129S1SvImJ_G0029550.1 mouse_genomes_project 5 51870927 51872049 + Anapc4 protein_coding retained_intron MGP_129S1SvImJ_T0010687.1 MGP_129S1SvImJ_G0008803.1 mouse_genomes_project 5 27255906 27255973 - Gm23801 miRNA miRNA MGP_129S1SvImJ_T0008489.1 MGP_129S1SvImJ_G0006885.1 mouse_genomes_project 5 156543053 156550125 - Gm43597 lincRNA lincRNA MGP_129S1SvImJ_T0008490.1 MGP_129S1SvImJ_G0006885.1 mouse_genomes_project 5 156543058 156550088 - Gm43597 lincRNA lincRNA MGP_129S1SvImJ_T0008491.1 MGP_129S1SvImJ_G0006885.1 mouse_genomes_project 5 156545020 156550005 - Gm43597 lincRNA lincRNA MGP_129S1SvImJ_T0070517.1 MGP_129S1SvImJ_G0029357.1 mouse_genomes_project 5 22625467 22884896 - MGP_129S1SvImJ_P0070517 Prkag2 protein_coding protein_coding MGP_129S1SvImJ_T0070518.1 MGP_129S1SvImJ_G0029357.1 mouse_genomes_project 5 22625471 22771669 - MGP_129S1SvImJ_P0070518 Prkag2 protein_coding protein_coding MGP_129S1SvImJ_T0070519.1 MGP_129S1SvImJ_G0029357.1 mouse_genomes_project 5 22625471 22674325 - MGP_129S1SvImJ_P0070519 Prkag2 protein_coding protein_coding MGP_129S1SvImJ_T0070520.1 MGP_129S1SvImJ_G0029357.1 mouse_genomes_project 5 22626499 22636126 - Prkag2 protein_coding retained_intron MGP_129S1SvImJ_T0070521.1 MGP_129S1SvImJ_G0029357.1 mouse_genomes_project 5 22633628 22674365 - MGP_129S1SvImJ_P0070521 Prkag2 protein_coding protein_coding MGP_129S1SvImJ_T0070522.1 MGP_129S1SvImJ_G0029357.1 mouse_genomes_project 5 22635909 22668524 - MGP_129S1SvImJ_P0070522 Prkag2 protein_coding protein_coding MGP_129S1SvImJ_T0070523.1 MGP_129S1SvImJ_G0029357.1 mouse_genomes_project 5 22639248 22656191 - Prkag2 protein_coding retained_intron MGP_129S1SvImJ_T0070524.1 MGP_129S1SvImJ_G0029357.1 mouse_genomes_project 5 22639774 22674308 - Prkag2 protein_coding retained_intron MGP_129S1SvImJ_T0070525.1 MGP_129S1SvImJ_G0029357.1 mouse_genomes_project 5 22656199 22674831 - MGP_129S1SvImJ_P0070525 Prkag2 protein_coding protein_coding MGP_129S1SvImJ_T0070526.1 MGP_129S1SvImJ_G0029357.1 mouse_genomes_project 5 22672084 22674306 - Prkag2 protein_coding processed_transcript MGP_129S1SvImJ_T0071565.1 MGP_129S1SvImJ_G0029533.1 mouse_genomes_project 5 44197180 44218340 + MGP_129S1SvImJ_P0071565 Lap3 protein_coding protein_coding MGP_129S1SvImJ_T0071566.1 MGP_129S1SvImJ_G0029533.1 mouse_genomes_project 5 44197310 44206483 + Lap3 protein_coding retained_intron MGP_129S1SvImJ_T0071567.1 MGP_129S1SvImJ_G0029533.1 mouse_genomes_project 5 44197332 44209122 + MGP_129S1SvImJ_P0071567 Lap3 protein_coding protein_coding MGP_129S1SvImJ_T0071568.1 MGP_129S1SvImJ_G0029533.1 mouse_genomes_project 5 44202036 44210567 + Lap3 protein_coding retained_intron MGP_129S1SvImJ_T0071569.1 MGP_129S1SvImJ_G0029533.1 mouse_genomes_project 5 44206076 44210538 + Lap3 protein_coding retained_intron MGP_129S1SvImJ_T0071570.1 MGP_129S1SvImJ_G0029533.1 mouse_genomes_project 5 44214857 44217022 + Lap3 protein_coding retained_intron MGP_129S1SvImJ_T0001637.1 MGP_129S1SvImJ_G0001554.1 mouse_genomes_project 5 57435667 57439153 + TEC TEC MGP_129S1SvImJ_T0071354.1 MGP_129S1SvImJ_G0029495.1 mouse_genomes_project 5 35137797 35161532 - MGP_129S1SvImJ_P0071354 Man2b2 protein_coding protein_coding MGP_129S1SvImJ_T0071355.1 MGP_129S1SvImJ_G0029495.1 mouse_genomes_project 5 35139682 35143842 - MGP_129S1SvImJ_P0071355 Man2b2 protein_coding protein_coding MGP_129S1SvImJ_T0071356.1 MGP_129S1SvImJ_G0029495.1 mouse_genomes_project 5 35139688 35148563 - MGP_129S1SvImJ_P0071356 Man2b2 protein_coding protein_coding MGP_129S1SvImJ_T0073017.1 MGP_129S1SvImJ_G0029832.1 mouse_genomes_project 5 108822326 108876165 - MGP_129S1SvImJ_P0073017 Hfm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073018.1 MGP_129S1SvImJ_G0029832.1 mouse_genomes_project 5 108822328 108911588 - MGP_129S1SvImJ_P0073018 Hfm1 protein_coding protein_coding MGP_129S1SvImJ_T0073019.1 MGP_129S1SvImJ_G0029832.1 mouse_genomes_project 5 108822331 108911157 - MGP_129S1SvImJ_P0073019 Hfm1 protein_coding protein_coding MGP_129S1SvImJ_T0073020.1 MGP_129S1SvImJ_G0029832.1 mouse_genomes_project 5 108822793 108908152 - MGP_129S1SvImJ_P0073020 Hfm1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0073021.1 MGP_129S1SvImJ_G0029832.1 mouse_genomes_project 5 108823696 108870763 - MGP_129S1SvImJ_P0073021 Hfm1 protein_coding protein_coding MGP_129S1SvImJ_T0073022.1 MGP_129S1SvImJ_G0029832.1 mouse_genomes_project 5 108883495 108911525 - Hfm1 protein_coding retained_intron MGP_129S1SvImJ_T0073023.1 MGP_129S1SvImJ_G0029832.1 mouse_genomes_project 5 108883495 108911157 - MGP_129S1SvImJ_P0073023 Hfm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073024.1 MGP_129S1SvImJ_G0029832.1 mouse_genomes_project 5 108883679 108911119 - MGP_129S1SvImJ_P0073024 Hfm1 protein_coding protein_coding MGP_129S1SvImJ_T0008351.1 MGP_129S1SvImJ_G0006791.1 mouse_genomes_project 5 122969400 122977127 - Tbx3os2 lincRNA lincRNA MGP_129S1SvImJ_T0015208.1 MGP_129S1SvImJ_G0013297.1 mouse_genomes_project 5 145527653 145528127 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010722.1 MGP_129S1SvImJ_G0008838.1 mouse_genomes_project 5 113489234 113489343 + Mir701 miRNA miRNA MGP_129S1SvImJ_T0001843.1 MGP_129S1SvImJ_G0001758.1 mouse_genomes_project 5 127781753 127783259 + TEC TEC MGP_129S1SvImJ_T0001840.1 MGP_129S1SvImJ_G0001755.1 mouse_genomes_project 5 127300879 127301342 - TEC TEC MGP_129S1SvImJ_T0072754.1 MGP_129S1SvImJ_G0029770.1 mouse_genomes_project 5 98749519 98751399 - MGP_129S1SvImJ_P0072754 Gk2 protein_coding protein_coding MGP_129S1SvImJ_T0014917.1 MGP_129S1SvImJ_G0013006.1 mouse_genomes_project 5 20519403 20520012 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008171.1 MGP_129S1SvImJ_G0006663.1 mouse_genomes_project 5 73254384 73261312 + Gm34411 lincRNA lincRNA MGP_129S1SvImJ_T0008349.1 MGP_129S1SvImJ_G0006789.1 mouse_genomes_project 5 122904527 122912999 + Gm16063 lincRNA lincRNA MGP_129S1SvImJ_T0008203.1 MGP_129S1SvImJ_G0006687.1 mouse_genomes_project 5 86522468 86524446 + Gm43567 lincRNA lincRNA MGP_129S1SvImJ_T0015077.1 MGP_129S1SvImJ_G0013166.1 mouse_genomes_project 5 89063247 89065105 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073938.1 MGP_129S1SvImJ_G0030019.1 mouse_genomes_project 5 124298287 124338462 - MGP_129S1SvImJ_P0073938 protein_coding protein_coding MGP_129S1SvImJ_T0073939.1 MGP_129S1SvImJ_G0030019.1 mouse_genomes_project 5 124299198 124335927 - protein_coding retained_intron MGP_129S1SvImJ_T0015247.1 MGP_129S1SvImJ_G0013336.1 mouse_genomes_project 5 157293389 157293912 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014922.1 MGP_129S1SvImJ_G0013011.1 mouse_genomes_project 5 21798865 21799350 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001654.1 MGP_129S1SvImJ_G0001570.1 mouse_genomes_project 5 65135927 65136847 + TEC TEC MGP_129S1SvImJ_T0069970.1 MGP_129S1SvImJ_G0029259.1 mouse_genomes_project 5 409112 451460 + MGP_129S1SvImJ_P0069970 Pex1 protein_coding protein_coding MGP_129S1SvImJ_T0069971.1 MGP_129S1SvImJ_G0029259.1 mouse_genomes_project 5 409112 451462 + MGP_129S1SvImJ_P0069971 Pex1 protein_coding protein_coding MGP_129S1SvImJ_T0069972.1 MGP_129S1SvImJ_G0029259.1 mouse_genomes_project 5 409245 419753 + MGP_129S1SvImJ_P0069972 Pex1 protein_coding protein_coding MGP_129S1SvImJ_T0069973.1 MGP_129S1SvImJ_G0029259.1 mouse_genomes_project 5 409417 438234 + MGP_129S1SvImJ_P0069973 Pex1 protein_coding protein_coding MGP_129S1SvImJ_T0069974.1 MGP_129S1SvImJ_G0029259.1 mouse_genomes_project 5 418712 420012 + Pex1 protein_coding retained_intron MGP_129S1SvImJ_T0069975.1 MGP_129S1SvImJ_G0029259.1 mouse_genomes_project 5 420092 434913 + MGP_129S1SvImJ_P0069975 Pex1 protein_coding protein_coding MGP_129S1SvImJ_T0069976.1 MGP_129S1SvImJ_G0029259.1 mouse_genomes_project 5 423509 432331 + Pex1 protein_coding retained_intron MGP_129S1SvImJ_T0069977.1 MGP_129S1SvImJ_G0029259.1 mouse_genomes_project 5 433099 438707 + MGP_129S1SvImJ_P0069977 Pex1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069978.1 MGP_129S1SvImJ_G0029259.1 mouse_genomes_project 5 433972 434959 + Pex1 protein_coding retained_intron MGP_129S1SvImJ_T0069979.1 MGP_129S1SvImJ_G0029259.1 mouse_genomes_project 5 438268 438671 + Pex1 protein_coding retained_intron MGP_129S1SvImJ_T0069980.1 MGP_129S1SvImJ_G0029259.1 mouse_genomes_project 5 441406 442044 + Pex1 protein_coding retained_intron MGP_129S1SvImJ_T0069982.1 MGP_129S1SvImJ_G0029259.1 mouse_genomes_project 5 449400 450141 + Pex1 protein_coding retained_intron MGP_129S1SvImJ_T0069983.1 MGP_129S1SvImJ_G0029259.1 mouse_genomes_project 5 449844 451191 + Pex1 protein_coding retained_intron MGP_129S1SvImJ_T0069984.1 MGP_129S1SvImJ_G0029259.1 mouse_genomes_project 5 450380 451048 + Pex1 protein_coding retained_intron MGP_129S1SvImJ_T0001866.1 MGP_129S1SvImJ_G0001780.1 mouse_genomes_project 5 134795966 134796392 - TEC TEC MGP_129S1SvImJ_T0015114.1 MGP_129S1SvImJ_G0013203.1 mouse_genomes_project 5 106266485 106266686 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102588.1 MGP_129S1SvImJ_G0040421.1 mouse_genomes_project 5 154709435 154709658 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015102.1 MGP_129S1SvImJ_G0013191.1 mouse_genomes_project 5 101268636 101269094 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075924.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153095617 153229685 + MGP_129S1SvImJ_P0075924 Pan3 protein_coding protein_coding MGP_129S1SvImJ_T0075925.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153095909 153229679 + MGP_129S1SvImJ_P0075925 Pan3 protein_coding protein_coding MGP_129S1SvImJ_T0075926.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153096036 153174070 + MGP_129S1SvImJ_P0075926 Pan3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0075927.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153096352 153125756 + Pan3 protein_coding retained_intron MGP_129S1SvImJ_T0075928.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153096352 153124151 + Pan3 protein_coding processed_transcript MGP_129S1SvImJ_T0075929.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153096352 153204789 + MGP_129S1SvImJ_P0075929 Pan3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075930.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153121135 153159412 + Pan3 protein_coding retained_intron MGP_129S1SvImJ_T0075931.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153121139 153227130 + MGP_129S1SvImJ_P0075931 Pan3 protein_coding protein_coding MGP_129S1SvImJ_T0075932.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153121139 153227130 + MGP_129S1SvImJ_P0075932 Pan3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075933.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153121219 153204414 + MGP_129S1SvImJ_P0075933 Pan3 protein_coding protein_coding MGP_129S1SvImJ_T0075934.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153122215 153124529 + Pan3 protein_coding retained_intron MGP_129S1SvImJ_T0075935.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153123677 153163483 + Pan3 protein_coding processed_transcript MGP_129S1SvImJ_T0075936.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153123708 153229679 + MGP_129S1SvImJ_P0075936 Pan3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075937.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153189435 153193190 + Pan3 protein_coding retained_intron MGP_129S1SvImJ_T0075938.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153191219 153204444 + Pan3 protein_coding retained_intron MGP_129S1SvImJ_T0075939.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153191620 153229679 + MGP_129S1SvImJ_P0075939 Pan3 protein_coding protein_coding MGP_129S1SvImJ_T0075940.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153203856 153204770 + Pan3 protein_coding retained_intron MGP_129S1SvImJ_T0075941.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153207519 153229671 + Pan3 protein_coding retained_intron MGP_129S1SvImJ_T0075942.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153207724 153209494 + Pan3 protein_coding retained_intron MGP_129S1SvImJ_T0075943.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153207800 153211102 + Pan3 protein_coding processed_transcript MGP_129S1SvImJ_T0075944.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153209149 153211048 + Pan3 protein_coding retained_intron MGP_129S1SvImJ_T0075945.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153217545 153224346 + Pan3 protein_coding retained_intron MGP_129S1SvImJ_T0075946.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153218437 153226861 + Pan3 protein_coding processed_transcript MGP_129S1SvImJ_T0075947.1 MGP_129S1SvImJ_G0030390.1 mouse_genomes_project 5 153220498 153229676 + MGP_129S1SvImJ_P0075947 Pan3 protein_coding protein_coding MGP_129S1SvImJ_T0008352.1 MGP_129S1SvImJ_G0006792.1 mouse_genomes_project 5 123108402 123110919 - 1700021F13Rik lincRNA lincRNA MGP_129S1SvImJ_T0008353.1 MGP_129S1SvImJ_G0006792.1 mouse_genomes_project 5 123108406 123110717 - 1700021F13Rik lincRNA lincRNA MGP_129S1SvImJ_T0072589.1 MGP_129S1SvImJ_G0029738.1 mouse_genomes_project 5 92613277 92729618 + MGP_129S1SvImJ_P0072589 Parm1 protein_coding protein_coding MGP_129S1SvImJ_T0075904.1 MGP_129S1SvImJ_G0030382.1 mouse_genomes_project 5 152572753 152586347 - MGP_129S1SvImJ_P0075904 Mtif3 protein_coding protein_coding MGP_129S1SvImJ_T0075905.1 MGP_129S1SvImJ_G0030382.1 mouse_genomes_project 5 152575700 152586349 - MGP_129S1SvImJ_P0075905 Mtif3 protein_coding protein_coding MGP_129S1SvImJ_T0075906.1 MGP_129S1SvImJ_G0030382.1 mouse_genomes_project 5 152576547 152586359 - MGP_129S1SvImJ_P0075906 Mtif3 protein_coding protein_coding MGP_129S1SvImJ_T0075907.1 MGP_129S1SvImJ_G0030382.1 mouse_genomes_project 5 152576547 152586311 - MGP_129S1SvImJ_P0075907 Mtif3 protein_coding protein_coding MGP_129S1SvImJ_T0075908.1 MGP_129S1SvImJ_G0030382.1 mouse_genomes_project 5 152581498 152586305 - MGP_129S1SvImJ_P0075908 Mtif3 protein_coding protein_coding MGP_129S1SvImJ_T0075909.1 MGP_129S1SvImJ_G0030382.1 mouse_genomes_project 5 152581509 152586362 - MGP_129S1SvImJ_P0075909 Mtif3 protein_coding protein_coding MGP_129S1SvImJ_T0074834.1 MGP_129S1SvImJ_G0030162.1 mouse_genomes_project 5 139089132 139123062 - MGP_129S1SvImJ_P0074834 Limk1 protein_coding protein_coding MGP_129S1SvImJ_T0074835.1 MGP_129S1SvImJ_G0030162.1 mouse_genomes_project 5 139089133 139112707 - MGP_129S1SvImJ_P0074835 Limk1 protein_coding protein_coding MGP_129S1SvImJ_T0074836.1 MGP_129S1SvImJ_G0030162.1 mouse_genomes_project 5 139089292 139112679 - MGP_129S1SvImJ_P0074836 Limk1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074837.1 MGP_129S1SvImJ_G0030162.1 mouse_genomes_project 5 139093094 139098664 - MGP_129S1SvImJ_P0074837 Limk1 protein_coding protein_coding MGP_129S1SvImJ_T0074838.1 MGP_129S1SvImJ_G0030162.1 mouse_genomes_project 5 139098402 139102878 - Limk1 protein_coding retained_intron MGP_129S1SvImJ_T0074839.1 MGP_129S1SvImJ_G0030162.1 mouse_genomes_project 5 139102631 139123038 - Limk1 protein_coding retained_intron MGP_129S1SvImJ_T0015180.1 MGP_129S1SvImJ_G0013269.1 mouse_genomes_project 5 134305086 134305488 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008143.1 MGP_129S1SvImJ_G0006640.1 mouse_genomes_project 5 51309247 51309522 - Gm43179 lincRNA lincRNA MGP_129S1SvImJ_T0070320.1 MGP_129S1SvImJ_G0029321.1 mouse_genomes_project 5 19231282 19278861 - MGP_129S1SvImJ_P0070320 Napepld protein_coding protein_coding MGP_129S1SvImJ_T0070321.1 MGP_129S1SvImJ_G0029321.1 mouse_genomes_project 5 19231284 19278863 - MGP_129S1SvImJ_P0070321 Napepld protein_coding protein_coding MGP_129S1SvImJ_T0098596.1 MGP_129S1SvImJ_G0036681.1 mouse_genomes_project 5 374242 374362 + n-R5s169 rRNA rRNA MGP_129S1SvImJ_T0075613.1 MGP_129S1SvImJ_G0030318.1 mouse_genomes_project 5 148164569 148192845 - MGP_129S1SvImJ_P0075613 Fbxl18 protein_coding protein_coding MGP_129S1SvImJ_T0075614.1 MGP_129S1SvImJ_G0030318.1 mouse_genomes_project 5 148169378 148170487 - Fbxl18 protein_coding retained_intron MGP_129S1SvImJ_T0075615.1 MGP_129S1SvImJ_G0030318.1 mouse_genomes_project 5 148169391 148192662 - MGP_129S1SvImJ_P0075615 Fbxl18 protein_coding protein_coding MGP_129S1SvImJ_T0075616.1 MGP_129S1SvImJ_G0030318.1 mouse_genomes_project 5 148169654 148170096 - Fbxl18 protein_coding processed_transcript MGP_129S1SvImJ_T0075617.1 MGP_129S1SvImJ_G0030318.1 mouse_genomes_project 5 148179913 148192845 - Fbxl18 protein_coding retained_intron MGP_129S1SvImJ_T0015215.1 MGP_129S1SvImJ_G0013304.1 mouse_genomes_project 5 148785041 148785579 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001457.1 MGP_129S1SvImJ_G0001378.1 mouse_genomes_project 5 4200140 4203424 - TEC TEC MGP_129S1SvImJ_T0099972.1 MGP_129S1SvImJ_G0038039.1 mouse_genomes_project 5 140719905 140720077 - Gm22214 snRNA snRNA MGP_129S1SvImJ_T0008303.1 MGP_129S1SvImJ_G0006758.1 mouse_genomes_project 5 114775645 114778879 + 1700028D13Rik lincRNA lincRNA MGP_129S1SvImJ_T0008304.1 MGP_129S1SvImJ_G0006758.1 mouse_genomes_project 5 114775688 114778881 + 1700028D13Rik lincRNA lincRNA MGP_129S1SvImJ_T0001562.1 MGP_129S1SvImJ_G0001480.1 mouse_genomes_project 5 43406923 43409142 - TEC TEC MGP_129S1SvImJ_T0074645.1 MGP_129S1SvImJ_G0030133.1 mouse_genomes_project 5 133949235 133973154 - MGP_129S1SvImJ_P0074645 Phkg1 protein_coding protein_coding MGP_129S1SvImJ_T0074646.1 MGP_129S1SvImJ_G0030133.1 mouse_genomes_project 5 133952857 134000096 - MGP_129S1SvImJ_P0074646 Phkg1 protein_coding protein_coding MGP_129S1SvImJ_T0074647.1 MGP_129S1SvImJ_G0030133.1 mouse_genomes_project 5 133952862 133957668 - Phkg1 protein_coding retained_intron MGP_129S1SvImJ_T0074648.1 MGP_129S1SvImJ_G0030133.1 mouse_genomes_project 5 133957439 133959558 - Phkg1 protein_coding processed_transcript MGP_129S1SvImJ_T0074649.1 MGP_129S1SvImJ_G0030133.1 mouse_genomes_project 5 133971542 133973082 - Phkg1 protein_coding retained_intron MGP_129S1SvImJ_T0070398.1 MGP_129S1SvImJ_G0029333.1 mouse_genomes_project 5 21525197 21530227 - MGP_129S1SvImJ_P0070398 Tomm7 protein_coding protein_coding MGP_129S1SvImJ_T0075900.1 MGP_129S1SvImJ_G0030381.1 mouse_genomes_project 5 152569837 152576795 + MGP_129S1SvImJ_P0075900 Gtf3a protein_coding protein_coding MGP_129S1SvImJ_T0075901.1 MGP_129S1SvImJ_G0030381.1 mouse_genomes_project 5 152569878 152576784 + Gtf3a protein_coding retained_intron MGP_129S1SvImJ_T0075902.1 MGP_129S1SvImJ_G0030381.1 mouse_genomes_project 5 152569885 152576787 + MGP_129S1SvImJ_P0075902 Gtf3a protein_coding protein_coding MGP_129S1SvImJ_T0075903.1 MGP_129S1SvImJ_G0030381.1 mouse_genomes_project 5 152571187 152576784 + Gtf3a protein_coding retained_intron MGP_129S1SvImJ_T0075227.1 MGP_129S1SvImJ_G0030235.1 mouse_genomes_project 5 142388724 142406164 - MGP_129S1SvImJ_P0075227 Fbxo24 protein_coding protein_coding MGP_129S1SvImJ_T0075228.1 MGP_129S1SvImJ_G0030235.1 mouse_genomes_project 5 142388724 142401162 - MGP_129S1SvImJ_P0075228 Fbxo24 protein_coding protein_coding MGP_129S1SvImJ_T0075229.1 MGP_129S1SvImJ_G0030235.1 mouse_genomes_project 5 142388727 142406118 - MGP_129S1SvImJ_P0075229 Fbxo24 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0001785.1 MGP_129S1SvImJ_G0001700.1 mouse_genomes_project 5 115733067 115733631 + TEC TEC MGP_129S1SvImJ_T0071215.1 MGP_129S1SvImJ_G0029471.1 mouse_genomes_project 5 33012805 33076427 + Htt protein_coding retained_intron MGP_129S1SvImJ_T0071216.1 MGP_129S1SvImJ_G0029471.1 mouse_genomes_project 5 33012809 33167009 + MGP_129S1SvImJ_P0071216 Htt protein_coding protein_coding MGP_129S1SvImJ_T0071217.1 MGP_129S1SvImJ_G0029471.1 mouse_genomes_project 5 33012826 33068935 + Htt protein_coding retained_intron MGP_129S1SvImJ_T0071218.1 MGP_129S1SvImJ_G0029471.1 mouse_genomes_project 5 33050198 33052812 + Htt protein_coding retained_intron MGP_129S1SvImJ_T0071219.1 MGP_129S1SvImJ_G0029471.1 mouse_genomes_project 5 33061140 33066206 + Htt protein_coding retained_intron MGP_129S1SvImJ_T0071220.1 MGP_129S1SvImJ_G0029471.1 mouse_genomes_project 5 33064421 33066692 + Htt protein_coding retained_intron MGP_129S1SvImJ_T0071221.1 MGP_129S1SvImJ_G0029471.1 mouse_genomes_project 5 33129417 33137204 + Htt protein_coding retained_intron MGP_129S1SvImJ_T0071222.1 MGP_129S1SvImJ_G0029471.1 mouse_genomes_project 5 33138676 33158345 + Htt protein_coding retained_intron MGP_129S1SvImJ_T0008317.1 MGP_129S1SvImJ_G0006765.1 mouse_genomes_project 5 115784461 115794935 + Gm43095 lincRNA lincRNA MGP_129S1SvImJ_T0099896.1 MGP_129S1SvImJ_G0037963.1 mouse_genomes_project 5 3343808 3343901 + Gm24686 snRNA snRNA MGP_129S1SvImJ_T0071039.1 MGP_129S1SvImJ_G0029447.1 mouse_genomes_project 5 31783351 31812603 - MGP_129S1SvImJ_P0071039 Fam53a protein_coding protein_coding MGP_129S1SvImJ_T0071040.1 MGP_129S1SvImJ_G0029447.1 mouse_genomes_project 5 31783360 31811880 - MGP_129S1SvImJ_P0071040 Fam53a protein_coding protein_coding MGP_129S1SvImJ_T0071041.1 MGP_129S1SvImJ_G0029447.1 mouse_genomes_project 5 31783360 31812590 - MGP_129S1SvImJ_P0071041 Fam53a protein_coding protein_coding MGP_129S1SvImJ_T0071042.1 MGP_129S1SvImJ_G0029447.1 mouse_genomes_project 5 31783360 31812556 - MGP_129S1SvImJ_P0071042 Fam53a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071043.1 MGP_129S1SvImJ_G0029447.1 mouse_genomes_project 5 31791217 31812551 - MGP_129S1SvImJ_P0071043 Fam53a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071044.1 MGP_129S1SvImJ_G0029447.1 mouse_genomes_project 5 31791390 31812567 - MGP_129S1SvImJ_P0071044 Fam53a protein_coding protein_coding MGP_129S1SvImJ_T0071045.1 MGP_129S1SvImJ_G0029447.1 mouse_genomes_project 5 31793462 31812030 - MGP_129S1SvImJ_P0071045 Fam53a protein_coding protein_coding MGP_129S1SvImJ_T0071046.1 MGP_129S1SvImJ_G0029447.1 mouse_genomes_project 5 31797788 31812573 - Fam53a protein_coding processed_transcript MGP_129S1SvImJ_T0001718.1 MGP_129S1SvImJ_G0001633.1 mouse_genomes_project 5 74667614 74668944 + TEC TEC MGP_129S1SvImJ_T0001669.1 MGP_129S1SvImJ_G0001585.1 mouse_genomes_project 5 65789429 65793687 - TEC TEC MGP_129S1SvImJ_T0072487.1 MGP_129S1SvImJ_G0029710.1 mouse_genomes_project 5 89563035 89647586 + MGP_129S1SvImJ_P0072487 Rufy3 protein_coding protein_coding MGP_129S1SvImJ_T0072488.1 MGP_129S1SvImJ_G0029710.1 mouse_genomes_project 5 89563035 89656282 + MGP_129S1SvImJ_P0072488 Rufy3 protein_coding protein_coding MGP_129S1SvImJ_T0072489.1 MGP_129S1SvImJ_G0029710.1 mouse_genomes_project 5 89583363 89645818 + MGP_129S1SvImJ_P0072489 Rufy3 protein_coding protein_coding MGP_129S1SvImJ_T0072490.1 MGP_129S1SvImJ_G0029710.1 mouse_genomes_project 5 89583386 89647587 + MGP_129S1SvImJ_P0072490 Rufy3 protein_coding protein_coding MGP_129S1SvImJ_T0072491.1 MGP_129S1SvImJ_G0029710.1 mouse_genomes_project 5 89583427 89585763 + Rufy3 protein_coding retained_intron MGP_129S1SvImJ_T0072492.1 MGP_129S1SvImJ_G0029710.1 mouse_genomes_project 5 89583428 89614121 + Rufy3 protein_coding retained_intron MGP_129S1SvImJ_T0072493.1 MGP_129S1SvImJ_G0029710.1 mouse_genomes_project 5 89583644 89645819 + MGP_129S1SvImJ_P0072493 Rufy3 protein_coding protein_coding MGP_129S1SvImJ_T0072494.1 MGP_129S1SvImJ_G0029710.1 mouse_genomes_project 5 89651581 89653209 + Rufy3 protein_coding retained_intron MGP_129S1SvImJ_T0001807.1 MGP_129S1SvImJ_G0001722.1 mouse_genomes_project 5 120994572 120994679 + TEC TEC MGP_129S1SvImJ_T0004822.1 MGP_129S1SvImJ_G0004161.1 mouse_genomes_project 5 122842416 122847213 - Tbx3os1 antisense antisense MGP_129S1SvImJ_T0004823.1 MGP_129S1SvImJ_G0004161.1 mouse_genomes_project 5 122842419 122905895 - Tbx3os1 antisense antisense MGP_129S1SvImJ_T0004824.1 MGP_129S1SvImJ_G0004161.1 mouse_genomes_project 5 122842511 122843030 - Tbx3os1 antisense antisense MGP_129S1SvImJ_T0004825.1 MGP_129S1SvImJ_G0004161.1 mouse_genomes_project 5 122887970 122905972 - Tbx3os1 antisense antisense MGP_129S1SvImJ_T0004826.1 MGP_129S1SvImJ_G0004161.1 mouse_genomes_project 5 122888607 122906183 - Tbx3os1 antisense antisense MGP_129S1SvImJ_T0004827.1 MGP_129S1SvImJ_G0004161.1 mouse_genomes_project 5 122895444 122955673 - Tbx3os1 antisense antisense MGP_129S1SvImJ_T0004753.1 MGP_129S1SvImJ_G0004116.1 mouse_genomes_project 5 97977707 97981543 - Gm42604 antisense antisense MGP_129S1SvImJ_T0015141.1 MGP_129S1SvImJ_G0013230.1 mouse_genomes_project 5 111540055 111541940 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011845.1 MGP_129S1SvImJ_G0009944.1 mouse_genomes_project 5 72109491 72136648 + MGP_129S1SvImJ_P0011845 Atp10d polymorphic_pseudogene protein_coding MGP_129S1SvImJ_T0011846.1 MGP_129S1SvImJ_G0009944.1 mouse_genomes_project 5 72109491 72211042 + MGP_129S1SvImJ_P0011846 Atp10d polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0011847.1 MGP_129S1SvImJ_G0009944.1 mouse_genomes_project 5 72109515 72135784 + Atp10d polymorphic_pseudogene retained_intron MGP_129S1SvImJ_T0011848.1 MGP_129S1SvImJ_G0009944.1 mouse_genomes_project 5 72175312 72211042 + Atp10d polymorphic_pseudogene processed_transcript MGP_129S1SvImJ_T0011849.1 MGP_129S1SvImJ_G0009944.1 mouse_genomes_project 5 72191548 72211028 + MGP_129S1SvImJ_P0011849 Atp10d polymorphic_pseudogene protein_coding MGP_129S1SvImJ_T0011850.1 MGP_129S1SvImJ_G0009944.1 mouse_genomes_project 5 72191548 72211029 + Atp10d polymorphic_pseudogene processed_transcript MGP_129S1SvImJ_T0070479.1 MGP_129S1SvImJ_G0029347.1 mouse_genomes_project 5 22238474 22268666 - MGP_129S1SvImJ_P0070479 Gbx1 protein_coding protein_coding MGP_129S1SvImJ_T0073166.1 MGP_129S1SvImJ_G0029861.1 mouse_genomes_project 5 110776697 110790818 - Dgkq protein_coding retained_intron MGP_129S1SvImJ_T0073167.1 MGP_129S1SvImJ_G0029861.1 mouse_genomes_project 5 110776697 110800301 - MGP_129S1SvImJ_P0073167 Dgkq protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073168.1 MGP_129S1SvImJ_G0029861.1 mouse_genomes_project 5 110776697 110790818 - MGP_129S1SvImJ_P0073168 Dgkq protein_coding protein_coding MGP_129S1SvImJ_T0073169.1 MGP_129S1SvImJ_G0029861.1 mouse_genomes_project 5 110776697 110790818 - MGP_129S1SvImJ_P0073169 Dgkq protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073170.1 MGP_129S1SvImJ_G0029861.1 mouse_genomes_project 5 110776697 110790818 - MGP_129S1SvImJ_P0073170 Dgkq protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073171.1 MGP_129S1SvImJ_G0029861.1 mouse_genomes_project 5 110777051 110790818 - Dgkq protein_coding retained_intron MGP_129S1SvImJ_T0073172.1 MGP_129S1SvImJ_G0029861.1 mouse_genomes_project 5 110777051 110783654 - Dgkq protein_coding retained_intron MGP_129S1SvImJ_T0073173.1 MGP_129S1SvImJ_G0029861.1 mouse_genomes_project 5 110777278 110779933 - Dgkq protein_coding retained_intron MGP_129S1SvImJ_T0073174.1 MGP_129S1SvImJ_G0029861.1 mouse_genomes_project 5 110780862 110783498 - Dgkq protein_coding retained_intron MGP_129S1SvImJ_T0073175.1 MGP_129S1SvImJ_G0029861.1 mouse_genomes_project 5 110783498 110785139 - Dgkq protein_coding retained_intron MGP_129S1SvImJ_T0073176.1 MGP_129S1SvImJ_G0029861.1 mouse_genomes_project 5 110784549 110786003 - Dgkq protein_coding retained_intron MGP_129S1SvImJ_T0070036.1 MGP_129S1SvImJ_G0029270.1 mouse_genomes_project 5 1681722 2167818 - MGP_129S1SvImJ_P0070036 Cdk14 protein_coding protein_coding MGP_129S1SvImJ_T0070037.1 MGP_129S1SvImJ_G0029270.1 mouse_genomes_project 5 1681722 2288428 - MGP_129S1SvImJ_P0070037 Cdk14 protein_coding protein_coding MGP_129S1SvImJ_T0070038.1 MGP_129S1SvImJ_G0029270.1 mouse_genomes_project 5 1684178 2167061 - MGP_129S1SvImJ_P0070038 Cdk14 protein_coding protein_coding MGP_129S1SvImJ_T0070039.1 MGP_129S1SvImJ_G0029270.1 mouse_genomes_project 5 1685033 2167915 - MGP_129S1SvImJ_P0070039 Cdk14 protein_coding protein_coding MGP_129S1SvImJ_T0070040.1 MGP_129S1SvImJ_G0029270.1 mouse_genomes_project 5 1769116 1772535 - Cdk14 protein_coding retained_intron MGP_129S1SvImJ_T0070041.1 MGP_129S1SvImJ_G0029270.1 mouse_genomes_project 5 1805501 2167732 - Cdk14 protein_coding retained_intron MGP_129S1SvImJ_T0070042.1 MGP_129S1SvImJ_G0029270.1 mouse_genomes_project 5 1818114 1918923 - Cdk14 protein_coding processed_transcript MGP_129S1SvImJ_T0070043.1 MGP_129S1SvImJ_G0029270.1 mouse_genomes_project 5 1891362 2288455 - Cdk14 protein_coding retained_intron MGP_129S1SvImJ_T0070044.1 MGP_129S1SvImJ_G0029270.1 mouse_genomes_project 5 1979494 2288482 - Cdk14 protein_coding retained_intron MGP_129S1SvImJ_T0070045.1 MGP_129S1SvImJ_G0029270.1 mouse_genomes_project 5 2017522 2288424 - Cdk14 protein_coding retained_intron MGP_129S1SvImJ_T0070046.1 MGP_129S1SvImJ_G0029270.1 mouse_genomes_project 5 2071451 2082200 - Cdk14 protein_coding processed_transcript MGP_129S1SvImJ_T0070047.1 MGP_129S1SvImJ_G0029270.1 mouse_genomes_project 5 2125595 2168042 - MGP_129S1SvImJ_P0070047 Cdk14 protein_coding protein_coding MGP_129S1SvImJ_T0070048.1 MGP_129S1SvImJ_G0029270.1 mouse_genomes_project 5 2125596 2330922 - MGP_129S1SvImJ_P0070048 Cdk14 protein_coding protein_coding MGP_129S1SvImJ_T0070049.1 MGP_129S1SvImJ_G0029270.1 mouse_genomes_project 5 2150936 2168053 - Cdk14 protein_coding processed_transcript MGP_129S1SvImJ_T0070050.1 MGP_129S1SvImJ_G0029270.1 mouse_genomes_project 5 2202253 2288424 - Cdk14 protein_coding processed_transcript MGP_129S1SvImJ_T0011622.1 MGP_129S1SvImJ_G0009738.1 mouse_genomes_project 5 105243383 105243676 + Gm23085 misc_RNA misc_RNA MGP_129S1SvImJ_T0073145.1 MGP_129S1SvImJ_G0029858.1 mouse_genomes_project 5 110637841 110672027 - MGP_129S1SvImJ_P0073145 Cplx1 protein_coding protein_coding MGP_129S1SvImJ_T0073146.1 MGP_129S1SvImJ_G0029858.1 mouse_genomes_project 5 110639546 110672003 - MGP_129S1SvImJ_P0073146 Cplx1 protein_coding protein_coding MGP_129S1SvImJ_T0014902.1 MGP_129S1SvImJ_G0012991.1 mouse_genomes_project 5 18823140 18823492 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070163.1 MGP_129S1SvImJ_G0029288.1 mouse_genomes_project 5 5883482 5951148 + MGP_129S1SvImJ_P0070163 Abcb4 protein_coding protein_coding MGP_129S1SvImJ_T0070164.1 MGP_129S1SvImJ_G0029288.1 mouse_genomes_project 5 5883486 5891047 + Abcb4 protein_coding retained_intron MGP_129S1SvImJ_T0070165.1 MGP_129S1SvImJ_G0029288.1 mouse_genomes_project 5 5883714 5932002 + MGP_129S1SvImJ_P0070165 Abcb4 protein_coding protein_coding MGP_129S1SvImJ_T0070166.1 MGP_129S1SvImJ_G0029288.1 mouse_genomes_project 5 5919708 5922990 + Abcb4 protein_coding retained_intron MGP_129S1SvImJ_T0070167.1 MGP_129S1SvImJ_G0029288.1 mouse_genomes_project 5 5950473 5951153 + Abcb4 protein_coding retained_intron MGP_129S1SvImJ_T0004732.1 MGP_129S1SvImJ_G0004098.1 mouse_genomes_project 5 72228603 72282313 + Gm20647 antisense antisense MGP_129S1SvImJ_T0099962.1 MGP_129S1SvImJ_G0038029.1 mouse_genomes_project 5 121299840 121299947 - Gm26411 snRNA snRNA MGP_129S1SvImJ_T0074848.1 MGP_129S1SvImJ_G0030166.1 mouse_genomes_project 5 139401075 139411644 + MGP_129S1SvImJ_P0074848 Wbscr27 protein_coding protein_coding MGP_129S1SvImJ_T0074849.1 MGP_129S1SvImJ_G0030166.1 mouse_genomes_project 5 139401080 139410730 + MGP_129S1SvImJ_P0074849 Wbscr27 protein_coding protein_coding MGP_129S1SvImJ_T0074850.1 MGP_129S1SvImJ_G0030166.1 mouse_genomes_project 5 139401080 139410730 + MGP_129S1SvImJ_P0074850 Wbscr27 protein_coding protein_coding MGP_129S1SvImJ_T0074851.1 MGP_129S1SvImJ_G0030166.1 mouse_genomes_project 5 139401092 139410730 + MGP_129S1SvImJ_P0074851 Wbscr27 protein_coding protein_coding MGP_129S1SvImJ_T0074852.1 MGP_129S1SvImJ_G0030166.1 mouse_genomes_project 5 139401099 139410209 + MGP_129S1SvImJ_P0074852 Wbscr27 protein_coding protein_coding MGP_129S1SvImJ_T0074853.1 MGP_129S1SvImJ_G0030166.1 mouse_genomes_project 5 139401113 139403238 + MGP_129S1SvImJ_P0074853 Wbscr27 protein_coding protein_coding MGP_129S1SvImJ_T0074854.1 MGP_129S1SvImJ_G0030166.1 mouse_genomes_project 5 139401231 139409641 + MGP_129S1SvImJ_P0074854 Wbscr27 protein_coding protein_coding MGP_129S1SvImJ_T0074855.1 MGP_129S1SvImJ_G0030166.1 mouse_genomes_project 5 139401491 139406088 + Wbscr27 protein_coding processed_transcript MGP_129S1SvImJ_T0074856.1 MGP_129S1SvImJ_G0030166.1 mouse_genomes_project 5 139409468 139410239 + MGP_129S1SvImJ_P0074856 Wbscr27 protein_coding protein_coding MGP_129S1SvImJ_T0071396.1 MGP_129S1SvImJ_G0029501.1 mouse_genomes_project 5 35692320 35784298 + MGP_129S1SvImJ_P0071396 Evc2 protein_coding protein_coding MGP_129S1SvImJ_T0071397.1 MGP_129S1SvImJ_G0029501.1 mouse_genomes_project 5 35692429 35747130 + Evc2 protein_coding retained_intron MGP_129S1SvImJ_T0071398.1 MGP_129S1SvImJ_G0029501.1 mouse_genomes_project 5 35749247 35751366 + Evc2 protein_coding processed_transcript MGP_129S1SvImJ_T0071399.1 MGP_129S1SvImJ_G0029501.1 mouse_genomes_project 5 35775101 35777158 + Evc2 protein_coding retained_intron MGP_129S1SvImJ_T0001913.1 MGP_129S1SvImJ_G0001826.1 mouse_genomes_project 5 145381571 145383781 - TEC TEC MGP_129S1SvImJ_T0001658.1 MGP_129S1SvImJ_G0001574.1 mouse_genomes_project 5 65287119 65295947 + TEC TEC MGP_129S1SvImJ_T0099981.1 MGP_129S1SvImJ_G0038048.1 mouse_genomes_project 5 157667525 157667632 - Gm24242 snRNA snRNA MGP_129S1SvImJ_T0008140.1 MGP_129S1SvImJ_G0006637.1 mouse_genomes_project 5 49419216 49575206 + Gm43016 lincRNA lincRNA MGP_129S1SvImJ_T0101725.1 MGP_129S1SvImJ_G0039727.1 mouse_genomes_project 5 74389764 74390221 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0015157.1 MGP_129S1SvImJ_G0013246.1 mouse_genomes_project 5 117873533 117873905 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014884.1 MGP_129S1SvImJ_G0012973.1 mouse_genomes_project 5 11110240 11110751 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014949.1 MGP_129S1SvImJ_G0013038.1 mouse_genomes_project 5 29412083 29412707 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001705.1 MGP_129S1SvImJ_G0001620.1 mouse_genomes_project 5 73017139 73020523 - TEC TEC MGP_129S1SvImJ_T0074612.1 MGP_129S1SvImJ_G0030127.1 mouse_genomes_project 5 133763121 133778653 - MGP_129S1SvImJ_P0074612 Zfp11 protein_coding protein_coding MGP_129S1SvImJ_T0001814.1 MGP_129S1SvImJ_G0001729.1 mouse_genomes_project 5 121907622 121910315 + TEC TEC MGP_129S1SvImJ_T0001521.1 MGP_129S1SvImJ_G0001439.1 mouse_genomes_project 5 30803502 30804353 - TEC TEC MGP_129S1SvImJ_T0014908.1 MGP_129S1SvImJ_G0012997.1 mouse_genomes_project 5 19541550 19542192 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008208.1 MGP_129S1SvImJ_G0006692.1 mouse_genomes_project 5 91920100 91923724 + Gm43086 lincRNA lincRNA MGP_129S1SvImJ_T0015118.1 MGP_129S1SvImJ_G0013207.1 mouse_genomes_project 5 106760446 106760728 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008075.1 MGP_129S1SvImJ_G0006593.1 mouse_genomes_project 5 22761779 22774088 + 1500035N22Rik lincRNA lincRNA MGP_129S1SvImJ_T0070655.1 MGP_129S1SvImJ_G0029387.1 mouse_genomes_project 5 28208769 28248531 + MGP_129S1SvImJ_P0070655 protein_coding protein_coding MGP_129S1SvImJ_T0070656.1 MGP_129S1SvImJ_G0029387.1 mouse_genomes_project 5 28208823 28210863 + protein_coding retained_intron MGP_129S1SvImJ_T0070657.1 MGP_129S1SvImJ_G0029387.1 mouse_genomes_project 5 28208828 28227257 + protein_coding retained_intron MGP_129S1SvImJ_T0070658.1 MGP_129S1SvImJ_G0029387.1 mouse_genomes_project 5 28208835 28234639 + protein_coding retained_intron MGP_129S1SvImJ_T0070659.1 MGP_129S1SvImJ_G0029387.1 mouse_genomes_project 5 28208838 28233878 + MGP_129S1SvImJ_P0070659 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070660.1 MGP_129S1SvImJ_G0029387.1 mouse_genomes_project 5 28208862 28245077 + MGP_129S1SvImJ_P0070660 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070661.1 MGP_129S1SvImJ_G0029387.1 mouse_genomes_project 5 28239173 28243098 + protein_coding retained_intron MGP_129S1SvImJ_T0070662.1 MGP_129S1SvImJ_G0029387.1 mouse_genomes_project 5 28239653 28243352 + protein_coding processed_transcript MGP_129S1SvImJ_T0071819.1 MGP_129S1SvImJ_G0029577.1 mouse_genomes_project 5 65026131 65030757 + Lias protein_coding retained_intron MGP_129S1SvImJ_T0071820.1 MGP_129S1SvImJ_G0029577.1 mouse_genomes_project 5 65026151 65030186 + Lias protein_coding retained_intron MGP_129S1SvImJ_T0071821.1 MGP_129S1SvImJ_G0029577.1 mouse_genomes_project 5 65026152 65032260 + MGP_129S1SvImJ_P0071821 Lias protein_coding protein_coding MGP_129S1SvImJ_T0071822.1 MGP_129S1SvImJ_G0029577.1 mouse_genomes_project 5 65026216 65043362 + MGP_129S1SvImJ_P0071822 Lias protein_coding protein_coding MGP_129S1SvImJ_T0071823.1 MGP_129S1SvImJ_G0029577.1 mouse_genomes_project 5 65032115 65034492 + Lias protein_coding retained_intron MGP_129S1SvImJ_T0008354.1 MGP_129S1SvImJ_G0006793.1 mouse_genomes_project 5 123137059 123140588 - Gm43050 lincRNA lincRNA MGP_129S1SvImJ_T0008355.1 MGP_129S1SvImJ_G0006793.1 mouse_genomes_project 5 123139697 123140459 - Gm43050 lincRNA lincRNA MGP_129S1SvImJ_T0074468.1 MGP_129S1SvImJ_G0030101.1 mouse_genomes_project 5 128402440 128411383 - MGP_129S1SvImJ_P0074468 Eif2b1 protein_coding protein_coding MGP_129S1SvImJ_T0074469.1 MGP_129S1SvImJ_G0030101.1 mouse_genomes_project 5 128403981 128407147 - Eif2b1 protein_coding retained_intron MGP_129S1SvImJ_T0074470.1 MGP_129S1SvImJ_G0030101.1 mouse_genomes_project 5 128405311 128411313 - MGP_129S1SvImJ_P0074470 Eif2b1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074471.1 MGP_129S1SvImJ_G0030101.1 mouse_genomes_project 5 128405961 128411327 - MGP_129S1SvImJ_P0074471 Eif2b1 protein_coding protein_coding MGP_129S1SvImJ_T0074472.1 MGP_129S1SvImJ_G0030101.1 mouse_genomes_project 5 128409055 128411244 - MGP_129S1SvImJ_P0074472 Eif2b1 protein_coding protein_coding MGP_129S1SvImJ_T0074473.1 MGP_129S1SvImJ_G0030101.1 mouse_genomes_project 5 128410770 128411284 - MGP_129S1SvImJ_P0074473 Eif2b1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0008492.1 MGP_129S1SvImJ_G0006886.1 mouse_genomes_project 5 156780114 156830333 + Gm43299 lincRNA lincRNA MGP_129S1SvImJ_T0001479.1 MGP_129S1SvImJ_G0001400.1 mouse_genomes_project 5 11880760 11884764 + TEC TEC MGP_129S1SvImJ_T0001481.1 MGP_129S1SvImJ_G0001402.1 mouse_genomes_project 5 12068850 12071121 + TEC TEC MGP_129S1SvImJ_T0001742.1 MGP_129S1SvImJ_G0001657.1 mouse_genomes_project 5 98177591 98178137 - TEC TEC MGP_129S1SvImJ_T0018196.1 MGP_129S1SvImJ_G0015604.1 mouse_genomes_project 5 74071232 74071812 + Usp46os2 processed_transcript retained_intron MGP_129S1SvImJ_T0018197.1 MGP_129S1SvImJ_G0015604.1 mouse_genomes_project 5 74071233 74071812 + Usp46os2 processed_transcript processed_transcript MGP_129S1SvImJ_T0018198.1 MGP_129S1SvImJ_G0015604.1 mouse_genomes_project 5 74071238 74081094 + Usp46os2 processed_transcript antisense MGP_129S1SvImJ_T0001462.1 MGP_129S1SvImJ_G0001383.1 mouse_genomes_project 5 5712261 5718778 - TEC TEC MGP_129S1SvImJ_T0076044.1 MGP_129S1SvImJ_G0030407.1 mouse_genomes_project 5 155923415 155974171 + Rxfp2 protein_coding retained_intron MGP_129S1SvImJ_T0076045.1 MGP_129S1SvImJ_G0030407.1 mouse_genomes_project 5 155923415 155989264 + MGP_129S1SvImJ_P0076045 Rxfp2 protein_coding protein_coding MGP_129S1SvImJ_T0076046.1 MGP_129S1SvImJ_G0030407.1 mouse_genomes_project 5 155923415 155989264 + MGP_129S1SvImJ_P0076046 Rxfp2 protein_coding protein_coding MGP_129S1SvImJ_T0076047.1 MGP_129S1SvImJ_G0030407.1 mouse_genomes_project 5 155923446 155989256 + MGP_129S1SvImJ_P0076047 Rxfp2 protein_coding protein_coding MGP_129S1SvImJ_T0076048.1 MGP_129S1SvImJ_G0030407.1 mouse_genomes_project 5 155971987 155975473 + Rxfp2 protein_coding retained_intron MGP_129S1SvImJ_T0076049.1 MGP_129S1SvImJ_G0030407.1 mouse_genomes_project 5 155988612 155990112 + Rxfp2 protein_coding processed_transcript MGP_129S1SvImJ_T0070281.1 MGP_129S1SvImJ_G0029312.1 mouse_genomes_project 5 18407836 18476408 - MGP_129S1SvImJ_P0070281 Rsbn1l protein_coding protein_coding MGP_129S1SvImJ_T0070282.1 MGP_129S1SvImJ_G0029312.1 mouse_genomes_project 5 18410399 18480992 - MGP_129S1SvImJ_P0070282 Rsbn1l protein_coding protein_coding MGP_129S1SvImJ_T0070283.1 MGP_129S1SvImJ_G0029312.1 mouse_genomes_project 5 18436134 18438423 - Rsbn1l protein_coding retained_intron MGP_129S1SvImJ_T0070284.1 MGP_129S1SvImJ_G0029312.1 mouse_genomes_project 5 18436165 18467280 - MGP_129S1SvImJ_P0070284 Rsbn1l protein_coding protein_coding MGP_129S1SvImJ_T0099899.1 MGP_129S1SvImJ_G0037966.1 mouse_genomes_project 5 6812431 6812533 - Gm23312 snRNA snRNA MGP_129S1SvImJ_T0001624.1 MGP_129S1SvImJ_G0001541.1 mouse_genomes_project 5 56903021 56903176 + TEC TEC MGP_129S1SvImJ_T0018244.1 MGP_129S1SvImJ_G0015619.1 mouse_genomes_project 5 155179888 155250832 + Gm20488 processed_transcript processed_transcript MGP_129S1SvImJ_T0075531.1 MGP_129S1SvImJ_G0030299.1 mouse_genomes_project 5 145485665 145513914 + MGP_129S1SvImJ_P0075531 Eif3b protein_coding protein_coding MGP_129S1SvImJ_T0075532.1 MGP_129S1SvImJ_G0030299.1 mouse_genomes_project 5 145485698 145513921 + MGP_129S1SvImJ_P0075532 Eif3b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0075533.1 MGP_129S1SvImJ_G0030299.1 mouse_genomes_project 5 145493429 145497011 + Eif3b protein_coding retained_intron MGP_129S1SvImJ_T0075534.1 MGP_129S1SvImJ_G0030299.1 mouse_genomes_project 5 145510492 145513251 + MGP_129S1SvImJ_P0075534 Eif3b protein_coding protein_coding MGP_129S1SvImJ_T0010752.1 MGP_129S1SvImJ_G0008868.1 mouse_genomes_project 5 144342262 144342358 - Mir339 miRNA miRNA MGP_129S1SvImJ_T0073204.1 MGP_129S1SvImJ_G0029872.1 mouse_genomes_project 5 111549831 111557978 - MGP_129S1SvImJ_P0073204 protein_coding protein_coding MGP_129S1SvImJ_T0015229.1 MGP_129S1SvImJ_G0013318.1 mouse_genomes_project 5 151588760 151590303 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015103.1 MGP_129S1SvImJ_G0013192.1 mouse_genomes_project 5 101999918 102000352 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015110.1 MGP_129S1SvImJ_G0013199.1 mouse_genomes_project 5 104568197 104568452 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098960.1 MGP_129S1SvImJ_G0037038.1 mouse_genomes_project 5 107475667 107476995 + C230066G23Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0072562.1 MGP_129S1SvImJ_G0029726.1 mouse_genomes_project 5 91850282 91852533 + Cxcl5 protein_coding retained_intron MGP_129S1SvImJ_T0072563.1 MGP_129S1SvImJ_G0029726.1 mouse_genomes_project 5 91850300 91852533 + MGP_129S1SvImJ_P0072563 Cxcl5 protein_coding protein_coding MGP_129S1SvImJ_T0008274.1 MGP_129S1SvImJ_G0006743.1 mouse_genomes_project 5 110470747 110471685 - Gm42518 lincRNA lincRNA MGP_129S1SvImJ_T0001825.1 MGP_129S1SvImJ_G0001740.1 mouse_genomes_project 5 125275447 125278546 + TEC TEC MGP_129S1SvImJ_T0075137.1 MGP_129S1SvImJ_G0030221.1 mouse_genomes_project 5 142026173 142027210 + MGP_129S1SvImJ_P0075137 Ufsp1 protein_coding protein_coding MGP_129S1SvImJ_T0014985.1 MGP_129S1SvImJ_G0013074.1 mouse_genomes_project 5 46410480 46411285 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0074532.1 MGP_129S1SvImJ_G0030111.1 mouse_genomes_project 5 129259663 129287851 - MGP_129S1SvImJ_P0074532 Dhx37 protein_coding protein_coding MGP_129S1SvImJ_T0074533.1 MGP_129S1SvImJ_G0030111.1 mouse_genomes_project 5 129265028 129266138 - MGP_129S1SvImJ_P0074533 Dhx37 protein_coding protein_coding MGP_129S1SvImJ_T0074534.1 MGP_129S1SvImJ_G0030111.1 mouse_genomes_project 5 129266540 129269090 - Dhx37 protein_coding retained_intron MGP_129S1SvImJ_T0074535.1 MGP_129S1SvImJ_G0030111.1 mouse_genomes_project 5 129273803 129277755 - MGP_129S1SvImJ_P0074535 Dhx37 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075097.1 MGP_129S1SvImJ_G0030211.1 mouse_genomes_project 5 141668403 141678989 + MGP_129S1SvImJ_P0075097 Cldn15 protein_coding protein_coding MGP_129S1SvImJ_T0075098.1 MGP_129S1SvImJ_G0030211.1 mouse_genomes_project 5 141669658 141678975 + MGP_129S1SvImJ_P0075098 Cldn15 protein_coding protein_coding MGP_129S1SvImJ_T0075099.1 MGP_129S1SvImJ_G0030211.1 mouse_genomes_project 5 141677086 141678144 + Cldn15 protein_coding processed_transcript MGP_129S1SvImJ_T0074084.1 MGP_129S1SvImJ_G0030043.1 mouse_genomes_project 5 125775265 125794436 + MGP_129S1SvImJ_P0074084 Ppp1cc protein_coding protein_coding MGP_129S1SvImJ_T0074085.1 MGP_129S1SvImJ_G0030043.1 mouse_genomes_project 5 125775343 125794436 + MGP_129S1SvImJ_P0074085 Ppp1cc protein_coding protein_coding MGP_129S1SvImJ_T0074086.1 MGP_129S1SvImJ_G0030043.1 mouse_genomes_project 5 125775343 125794432 + MGP_129S1SvImJ_P0074086 Ppp1cc protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074087.1 MGP_129S1SvImJ_G0030043.1 mouse_genomes_project 5 125775343 125794436 + MGP_129S1SvImJ_P0074087 Ppp1cc protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074088.1 MGP_129S1SvImJ_G0030043.1 mouse_genomes_project 5 125775577 125794259 + MGP_129S1SvImJ_P0074088 Ppp1cc protein_coding protein_coding MGP_129S1SvImJ_T0074089.1 MGP_129S1SvImJ_G0030043.1 mouse_genomes_project 5 125775941 125787266 + Ppp1cc protein_coding retained_intron MGP_129S1SvImJ_T0074090.1 MGP_129S1SvImJ_G0030043.1 mouse_genomes_project 5 125785904 125794428 + MGP_129S1SvImJ_P0074090 Ppp1cc protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074091.1 MGP_129S1SvImJ_G0030043.1 mouse_genomes_project 5 125789204 125790393 + Ppp1cc protein_coding retained_intron MGP_129S1SvImJ_T0074092.1 MGP_129S1SvImJ_G0030043.1 mouse_genomes_project 5 125789479 125794428 + MGP_129S1SvImJ_P0074092 Ppp1cc protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074093.1 MGP_129S1SvImJ_G0030043.1 mouse_genomes_project 5 125790264 125792380 + MGP_129S1SvImJ_P0074093 Ppp1cc protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070982.1 MGP_129S1SvImJ_G0029436.1 mouse_genomes_project 5 30705162 30774321 + MGP_129S1SvImJ_P0070982 Yes1 protein_coding protein_coding MGP_129S1SvImJ_T0070983.1 MGP_129S1SvImJ_G0029436.1 mouse_genomes_project 5 30705361 30776619 + MGP_129S1SvImJ_P0070983 Yes1 protein_coding protein_coding MGP_129S1SvImJ_T0070984.1 MGP_129S1SvImJ_G0029436.1 mouse_genomes_project 5 30705375 30708116 + Yes1 protein_coding retained_intron MGP_129S1SvImJ_T0070985.1 MGP_129S1SvImJ_G0029436.1 mouse_genomes_project 5 30732894 30749762 + MGP_129S1SvImJ_P0070985 Yes1 protein_coding protein_coding MGP_129S1SvImJ_T0099927.1 MGP_129S1SvImJ_G0037994.1 mouse_genomes_project 5 70394105 70394212 - Gm26072 snRNA snRNA MGP_129S1SvImJ_T0072087.1 MGP_129S1SvImJ_G0029621.1 mouse_genomes_project 5 72983640 72992250 + MGP_129S1SvImJ_P0072087 Gm5868 protein_coding protein_coding MGP_129S1SvImJ_T0071502.1 MGP_129S1SvImJ_G0029523.1 mouse_genomes_project 5 42292313 42376502 + MGP_129S1SvImJ_P0071502 Cc2d2a protein_coding protein_coding MGP_129S1SvImJ_T0071503.1 MGP_129S1SvImJ_G0029523.1 mouse_genomes_project 5 42303523 42320282 + Cc2d2a protein_coding retained_intron MGP_129S1SvImJ_T0071504.1 MGP_129S1SvImJ_G0029523.1 mouse_genomes_project 5 42303523 42374847 + MGP_129S1SvImJ_P0071504 Cc2d2a protein_coding protein_coding MGP_129S1SvImJ_T0071505.1 MGP_129S1SvImJ_G0029523.1 mouse_genomes_project 5 42327876 42351483 + Cc2d2a protein_coding retained_intron MGP_129S1SvImJ_T0073590.1 MGP_129S1SvImJ_G0029945.1 mouse_genomes_project 5 117549703 117582643 + MGP_129S1SvImJ_P0073590 Ankrd13a protein_coding protein_coding MGP_129S1SvImJ_T0073591.1 MGP_129S1SvImJ_G0029945.1 mouse_genomes_project 5 117549971 117583029 + Ankrd13a protein_coding processed_transcript MGP_129S1SvImJ_T0073592.1 MGP_129S1SvImJ_G0029945.1 mouse_genomes_project 5 117562910 117580432 + MGP_129S1SvImJ_P0073592 Ankrd13a protein_coding protein_coding MGP_129S1SvImJ_T0073593.1 MGP_129S1SvImJ_G0029945.1 mouse_genomes_project 5 117572609 117583029 + Ankrd13a protein_coding processed_transcript MGP_129S1SvImJ_T0073594.1 MGP_129S1SvImJ_G0029945.1 mouse_genomes_project 5 117576277 117583029 + Ankrd13a protein_coding processed_transcript MGP_129S1SvImJ_T0073595.1 MGP_129S1SvImJ_G0029945.1 mouse_genomes_project 5 117576391 117578384 + Ankrd13a protein_coding retained_intron MGP_129S1SvImJ_T0015195.1 MGP_129S1SvImJ_G0013284.1 mouse_genomes_project 5 142666569 142666957 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098600.1 MGP_129S1SvImJ_G0036685.1 mouse_genomes_project 5 52161338 52161417 + n-R5s171 rRNA rRNA MGP_129S1SvImJ_T0101181.1 MGP_129S1SvImJ_G0039248.1 mouse_genomes_project 5 34986571 34986695 + Gm25767 snoRNA snoRNA MGP_129S1SvImJ_T0001608.1 MGP_129S1SvImJ_G0001525.1 mouse_genomes_project 5 50445258 50448665 - TEC TEC MGP_129S1SvImJ_T0074944.1 MGP_129S1SvImJ_G0030186.1 mouse_genomes_project 5 140194447 140210328 + MGP_129S1SvImJ_P0074944 Rhbdd2 protein_coding protein_coding MGP_129S1SvImJ_T0074945.1 MGP_129S1SvImJ_G0030186.1 mouse_genomes_project 5 140194483 140210400 + MGP_129S1SvImJ_P0074945 Rhbdd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074946.1 MGP_129S1SvImJ_G0030186.1 mouse_genomes_project 5 140194533 140201103 + Rhbdd2 protein_coding processed_transcript MGP_129S1SvImJ_T0074947.1 MGP_129S1SvImJ_G0030186.1 mouse_genomes_project 5 140194545 140197445 + Rhbdd2 protein_coding retained_intron MGP_129S1SvImJ_T0074948.1 MGP_129S1SvImJ_G0030186.1 mouse_genomes_project 5 140194552 140198375 + Rhbdd2 protein_coding retained_intron MGP_129S1SvImJ_T0074949.1 MGP_129S1SvImJ_G0030186.1 mouse_genomes_project 5 140196931 140203783 + MGP_129S1SvImJ_P0074949 Rhbdd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074950.1 MGP_129S1SvImJ_G0030186.1 mouse_genomes_project 5 140198361 140207592 + Rhbdd2 protein_coding retained_intron MGP_129S1SvImJ_T0008210.1 MGP_129S1SvImJ_G0006694.1 mouse_genomes_project 5 92333081 92359111 - Gm19619 lincRNA lincRNA MGP_129S1SvImJ_T0015060.1 MGP_129S1SvImJ_G0013149.1 mouse_genomes_project 5 78252049 78252386 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0071352.1 MGP_129S1SvImJ_G0029493.1 mouse_genomes_project 5 35071165 35072438 - MGP_129S1SvImJ_P0071352 Bloc1s4 protein_coding protein_coding MGP_129S1SvImJ_T0008392.1 MGP_129S1SvImJ_G0006814.1 mouse_genomes_project 5 130715606 130736545 - Gm42953 lincRNA lincRNA MGP_129S1SvImJ_T0014881.1 MGP_129S1SvImJ_G0012970.1 mouse_genomes_project 5 9625768 9626531 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001734.1 MGP_129S1SvImJ_G0001649.1 mouse_genomes_project 5 93090168 93091130 - TEC TEC MGP_129S1SvImJ_T0072939.1 MGP_129S1SvImJ_G0029808.1 mouse_genomes_project 5 105737780 105745268 - MGP_129S1SvImJ_P0072939 Gm17660 protein_coding protein_coding MGP_129S1SvImJ_T0072940.1 MGP_129S1SvImJ_G0029808.1 mouse_genomes_project 5 105737806 105745252 - MGP_129S1SvImJ_P0072940 Gm17660 protein_coding protein_coding MGP_129S1SvImJ_T0072941.1 MGP_129S1SvImJ_G0029808.1 mouse_genomes_project 5 105738964 105745268 - MGP_129S1SvImJ_P0072941 Gm17660 protein_coding protein_coding MGP_129S1SvImJ_T0073887.1 MGP_129S1SvImJ_G0030005.1 mouse_genomes_project 5 123867215 123891313 + MGP_129S1SvImJ_P0073887 Slc8b1 protein_coding protein_coding MGP_129S1SvImJ_T0073888.1 MGP_129S1SvImJ_G0030005.1 mouse_genomes_project 5 123867282 123891308 + MGP_129S1SvImJ_P0073888 Slc8b1 protein_coding protein_coding MGP_129S1SvImJ_T0073889.1 MGP_129S1SvImJ_G0030005.1 mouse_genomes_project 5 123867299 123891309 + MGP_129S1SvImJ_P0073889 Slc8b1 protein_coding protein_coding MGP_129S1SvImJ_T0073890.1 MGP_129S1SvImJ_G0030005.1 mouse_genomes_project 5 123867317 123869236 + MGP_129S1SvImJ_P0073890 Slc8b1 protein_coding protein_coding MGP_129S1SvImJ_T0073891.1 MGP_129S1SvImJ_G0030005.1 mouse_genomes_project 5 123868915 123875787 + MGP_129S1SvImJ_P0073891 Slc8b1 protein_coding protein_coding MGP_129S1SvImJ_T0073892.1 MGP_129S1SvImJ_G0030005.1 mouse_genomes_project 5 123869190 123890346 + MGP_129S1SvImJ_P0073892 Slc8b1 protein_coding protein_coding MGP_129S1SvImJ_T0073893.1 MGP_129S1SvImJ_G0030005.1 mouse_genomes_project 5 123876814 123878256 + Slc8b1 protein_coding retained_intron MGP_129S1SvImJ_T0074547.1 MGP_129S1SvImJ_G0030115.1 mouse_genomes_project 5 131178342 131519105 + MGP_129S1SvImJ_P0074547 Tmem132c protein_coding protein_coding MGP_129S1SvImJ_T0074548.1 MGP_129S1SvImJ_G0030115.1 mouse_genomes_project 5 131178360 131219232 + Tmem132c protein_coding processed_transcript MGP_129S1SvImJ_T0074549.1 MGP_129S1SvImJ_G0030115.1 mouse_genomes_project 5 131504887 131518179 + Tmem132c protein_coding processed_transcript MGP_129S1SvImJ_T0074550.1 MGP_129S1SvImJ_G0030115.1 mouse_genomes_project 5 131506638 131517799 + MGP_129S1SvImJ_P0074550 Tmem132c protein_coding protein_coding MGP_129S1SvImJ_T0071544.1 MGP_129S1SvImJ_G0029529.1 mouse_genomes_project 5 42813900 42868084 - MGP_129S1SvImJ_P0071544 Tapt1 protein_coding protein_coding MGP_129S1SvImJ_T0071545.1 MGP_129S1SvImJ_G0029529.1 mouse_genomes_project 5 42813905 42868079 - MGP_129S1SvImJ_P0071545 Tapt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071546.1 MGP_129S1SvImJ_G0029529.1 mouse_genomes_project 5 42815242 42821563 - Tapt1 protein_coding retained_intron MGP_129S1SvImJ_T0071547.1 MGP_129S1SvImJ_G0029529.1 mouse_genomes_project 5 42822969 42830849 - Tapt1 protein_coding retained_intron MGP_129S1SvImJ_T0071548.1 MGP_129S1SvImJ_G0029529.1 mouse_genomes_project 5 42827418 42859655 - MGP_129S1SvImJ_P0071548 Tapt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071549.1 MGP_129S1SvImJ_G0029529.1 mouse_genomes_project 5 42827433 42845786 - Tapt1 protein_coding retained_intron MGP_129S1SvImJ_T0071550.1 MGP_129S1SvImJ_G0029529.1 mouse_genomes_project 5 42833941 42845956 - Tapt1 protein_coding retained_intron MGP_129S1SvImJ_T0071551.1 MGP_129S1SvImJ_G0029529.1 mouse_genomes_project 5 42859271 42868088 - Tapt1 protein_coding retained_intron MGP_129S1SvImJ_T0010735.1 MGP_129S1SvImJ_G0008851.1 mouse_genomes_project 5 129335198 129335275 + Gm27551 miRNA miRNA MGP_129S1SvImJ_T0008211.1 MGP_129S1SvImJ_G0006695.1 mouse_genomes_project 5 92874590 92879148 - Gm28271 lincRNA lincRNA MGP_129S1SvImJ_T0074677.1 MGP_129S1SvImJ_G0030140.1 mouse_genomes_project 5 134186239 134249609 + MGP_129S1SvImJ_P0074677 Tpst1 protein_coding protein_coding MGP_129S1SvImJ_T0074678.1 MGP_129S1SvImJ_G0030140.1 mouse_genomes_project 5 134192283 134249609 + MGP_129S1SvImJ_P0074678 Tpst1 protein_coding protein_coding MGP_129S1SvImJ_T0074679.1 MGP_129S1SvImJ_G0030140.1 mouse_genomes_project 5 134207458 134215910 + MGP_129S1SvImJ_P0074679 Tpst1 protein_coding protein_coding MGP_129S1SvImJ_T0074680.1 MGP_129S1SvImJ_G0030140.1 mouse_genomes_project 5 134247836 134249592 + Tpst1 protein_coding retained_intron MGP_129S1SvImJ_T0018250.1 MGP_129S1SvImJ_G0015622.1 mouse_genomes_project 5 157376732 157391184 + processed_transcript retained_intron MGP_129S1SvImJ_T0018251.1 MGP_129S1SvImJ_G0015622.1 mouse_genomes_project 5 157376766 157405038 + processed_transcript lincRNA MGP_129S1SvImJ_T0018252.1 MGP_129S1SvImJ_G0015622.1 mouse_genomes_project 5 157376775 157422972 + processed_transcript lincRNA MGP_129S1SvImJ_T0018253.1 MGP_129S1SvImJ_G0015622.1 mouse_genomes_project 5 157409006 157422765 + processed_transcript lincRNA MGP_129S1SvImJ_T0018254.1 MGP_129S1SvImJ_G0015622.1 mouse_genomes_project 5 157415398 157441127 + processed_transcript lincRNA MGP_129S1SvImJ_T0018255.1 MGP_129S1SvImJ_G0015622.1 mouse_genomes_project 5 157415420 157439483 + processed_transcript lincRNA MGP_129S1SvImJ_T0099964.1 MGP_129S1SvImJ_G0038031.1 mouse_genomes_project 5 126142056 126142157 + Gm22965 snRNA snRNA MGP_129S1SvImJ_T0010734.1 MGP_129S1SvImJ_G0008850.1 mouse_genomes_project 5 128241193 128241273 - Gm27486 miRNA miRNA MGP_129S1SvImJ_T0001540.1 MGP_129S1SvImJ_G0001458.1 mouse_genomes_project 5 39866762 39868429 + TEC TEC MGP_129S1SvImJ_T0008093.1 MGP_129S1SvImJ_G0006605.1 mouse_genomes_project 5 29586166 29596297 - Gm43660 lincRNA lincRNA MGP_129S1SvImJ_T0075239.1 MGP_129S1SvImJ_G0030238.1 mouse_genomes_project 5 142418466 142420001 + MGP_129S1SvImJ_P0075239 Sap25 protein_coding protein_coding MGP_129S1SvImJ_T0075240.1 MGP_129S1SvImJ_G0030238.1 mouse_genomes_project 5 142418569 142420035 + MGP_129S1SvImJ_P0075240 Sap25 protein_coding protein_coding MGP_129S1SvImJ_T0075241.1 MGP_129S1SvImJ_G0030238.1 mouse_genomes_project 5 142418627 142419474 + Sap25 protein_coding retained_intron MGP_129S1SvImJ_T0075242.1 MGP_129S1SvImJ_G0030238.1 mouse_genomes_project 5 142419076 142419680 + Sap25 protein_coding retained_intron MGP_129S1SvImJ_T0075243.1 MGP_129S1SvImJ_G0030238.1 mouse_genomes_project 5 142419310 142419970 + Sap25 protein_coding retained_intron MGP_129S1SvImJ_T0075244.1 MGP_129S1SvImJ_G0030238.1 mouse_genomes_project 5 142419481 142420032 + Sap25 protein_coding retained_intron MGP_129S1SvImJ_T0015130.1 MGP_129S1SvImJ_G0013219.1 mouse_genomes_project 5 109899411 109899753 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008415.1 MGP_129S1SvImJ_G0006827.1 mouse_genomes_project 5 136818084 136819245 + Gm28616 lincRNA lincRNA MGP_129S1SvImJ_T0010714.1 MGP_129S1SvImJ_G0008830.1 mouse_genomes_project 5 91894254 91894324 - Gm24322 miRNA miRNA MGP_129S1SvImJ_T0001753.1 MGP_129S1SvImJ_G0001668.1 mouse_genomes_project 5 103363174 103365768 + TEC TEC MGP_129S1SvImJ_T0074616.1 MGP_129S1SvImJ_G0030129.1 mouse_genomes_project 5 133830646 133837706 + MGP_129S1SvImJ_P0074616 Mrps17 protein_coding protein_coding MGP_129S1SvImJ_T0074617.1 MGP_129S1SvImJ_G0030129.1 mouse_genomes_project 5 133830652 133833634 + MGP_129S1SvImJ_P0074617 Mrps17 protein_coding protein_coding MGP_129S1SvImJ_T0074618.1 MGP_129S1SvImJ_G0030129.1 mouse_genomes_project 5 133830653 133833551 + MGP_129S1SvImJ_P0074618 Mrps17 protein_coding protein_coding MGP_129S1SvImJ_T0074619.1 MGP_129S1SvImJ_G0030129.1 mouse_genomes_project 5 133830658 133833173 + MGP_129S1SvImJ_P0074619 Mrps17 protein_coding protein_coding MGP_129S1SvImJ_T0074620.1 MGP_129S1SvImJ_G0030129.1 mouse_genomes_project 5 133830660 133834030 + MGP_129S1SvImJ_P0074620 Mrps17 protein_coding protein_coding MGP_129S1SvImJ_T0074621.1 MGP_129S1SvImJ_G0030129.1 mouse_genomes_project 5 133830665 133833847 + MGP_129S1SvImJ_P0074621 Mrps17 protein_coding protein_coding MGP_129S1SvImJ_T0074622.1 MGP_129S1SvImJ_G0030129.1 mouse_genomes_project 5 133830667 133832495 + Mrps17 protein_coding retained_intron MGP_129S1SvImJ_T0074623.1 MGP_129S1SvImJ_G0030129.1 mouse_genomes_project 5 133830683 133833208 + MGP_129S1SvImJ_P0074623 Mrps17 protein_coding protein_coding MGP_129S1SvImJ_T0074624.1 MGP_129S1SvImJ_G0030129.1 mouse_genomes_project 5 133830707 133833444 + MGP_129S1SvImJ_P0074624 Mrps17 protein_coding protein_coding MGP_129S1SvImJ_T0074625.1 MGP_129S1SvImJ_G0030129.1 mouse_genomes_project 5 133830726 133833601 + MGP_129S1SvImJ_P0074625 Mrps17 protein_coding protein_coding MGP_129S1SvImJ_T0074626.1 MGP_129S1SvImJ_G0030129.1 mouse_genomes_project 5 133830846 133831983 + MGP_129S1SvImJ_P0074626 Mrps17 protein_coding protein_coding MGP_129S1SvImJ_T0071345.1 MGP_129S1SvImJ_G0029492.1 mouse_genomes_project 5 34945071 35014947 - MGP_129S1SvImJ_P0071345 D5Ertd579e protein_coding protein_coding MGP_129S1SvImJ_T0071346.1 MGP_129S1SvImJ_G0029492.1 mouse_genomes_project 5 34946836 34958317 - MGP_129S1SvImJ_P0071346 D5Ertd579e protein_coding protein_coding MGP_129S1SvImJ_T0071347.1 MGP_129S1SvImJ_G0029492.1 mouse_genomes_project 5 34960542 34965842 - D5Ertd579e protein_coding processed_transcript MGP_129S1SvImJ_T0071348.1 MGP_129S1SvImJ_G0029492.1 mouse_genomes_project 5 34962451 35014971 - D5Ertd579e protein_coding retained_intron MGP_129S1SvImJ_T0071349.1 MGP_129S1SvImJ_G0029492.1 mouse_genomes_project 5 34971703 35014947 - D5Ertd579e protein_coding retained_intron MGP_129S1SvImJ_T0071350.1 MGP_129S1SvImJ_G0029492.1 mouse_genomes_project 5 34986312 35015034 - MGP_129S1SvImJ_P0071350 D5Ertd579e protein_coding protein_coding MGP_129S1SvImJ_T0071351.1 MGP_129S1SvImJ_G0029492.1 mouse_genomes_project 5 35006135 35014980 - D5Ertd579e protein_coding retained_intron MGP_129S1SvImJ_T0074719.1 MGP_129S1SvImJ_G0030150.1 mouse_genomes_project 5 135676508 135776085 - MGP_129S1SvImJ_P0074719 Auts2 protein_coding protein_coding MGP_129S1SvImJ_T0074720.1 MGP_129S1SvImJ_G0030150.1 mouse_genomes_project 5 135676517 136816998 - Auts2 protein_coding processed_transcript MGP_129S1SvImJ_T0074721.1 MGP_129S1SvImJ_G0030150.1 mouse_genomes_project 5 135676970 136816311 - Auts2 protein_coding processed_transcript MGP_129S1SvImJ_T0074722.1 MGP_129S1SvImJ_G0030150.1 mouse_genomes_project 5 135678571 136312995 - Auts2 protein_coding processed_transcript MGP_129S1SvImJ_T0074723.1 MGP_129S1SvImJ_G0030150.1 mouse_genomes_project 5 135678803 135719468 - MGP_129S1SvImJ_P0074723 Auts2 protein_coding protein_coding MGP_129S1SvImJ_T0074724.1 MGP_129S1SvImJ_G0030150.1 mouse_genomes_project 5 135678907 136814696 - Auts2 protein_coding processed_transcript MGP_129S1SvImJ_T0074725.1 MGP_129S1SvImJ_G0030150.1 mouse_genomes_project 5 135679820 135700252 - MGP_129S1SvImJ_P0074725 Auts2 protein_coding protein_coding MGP_129S1SvImJ_T0074726.1 MGP_129S1SvImJ_G0030150.1 mouse_genomes_project 5 135684915 135695220 - Auts2 protein_coding processed_transcript MGP_129S1SvImJ_T0074727.1 MGP_129S1SvImJ_G0030150.1 mouse_genomes_project 5 135711521 135713826 - Auts2 protein_coding retained_intron MGP_129S1SvImJ_T0074728.1 MGP_129S1SvImJ_G0030150.1 mouse_genomes_project 5 135717770 135778407 - Auts2 protein_coding retained_intron MGP_129S1SvImJ_T0074729.1 MGP_129S1SvImJ_G0030150.1 mouse_genomes_project 5 135719185 135774834 - Auts2 protein_coding processed_transcript MGP_129S1SvImJ_T0074730.1 MGP_129S1SvImJ_G0030150.1 mouse_genomes_project 5 135774747 135778442 - Auts2 protein_coding retained_intron MGP_129S1SvImJ_T0074731.1 MGP_129S1SvImJ_G0030150.1 mouse_genomes_project 5 136021160 136816058 - Auts2 protein_coding retained_intron MGP_129S1SvImJ_T0074732.1 MGP_129S1SvImJ_G0030150.1 mouse_genomes_project 5 136286978 136290520 - Auts2 protein_coding retained_intron MGP_129S1SvImJ_T0074733.1 MGP_129S1SvImJ_G0030150.1 mouse_genomes_project 5 136287954 136814742 - Auts2 protein_coding processed_transcript MGP_129S1SvImJ_T0074734.1 MGP_129S1SvImJ_G0030150.1 mouse_genomes_project 5 136292802 136313067 - MGP_129S1SvImJ_P0074734 Auts2 protein_coding protein_coding MGP_129S1SvImJ_T0074735.1 MGP_129S1SvImJ_G0030150.1 mouse_genomes_project 5 136292883 136710769 - MGP_129S1SvImJ_P0074735 Auts2 protein_coding protein_coding MGP_129S1SvImJ_T0074736.1 MGP_129S1SvImJ_G0030150.1 mouse_genomes_project 5 136312387 136816451 - Auts2 protein_coding retained_intron MGP_129S1SvImJ_T0074737.1 MGP_129S1SvImJ_G0030150.1 mouse_genomes_project 5 136814339 136814648 - MGP_129S1SvImJ_P0074737 Auts2 protein_coding protein_coding MGP_129S1SvImJ_T0073619.1 MGP_129S1SvImJ_G0029953.1 mouse_genomes_project 5 117750580 117762212 + MGP_129S1SvImJ_P0073619 2210016L21Rik protein_coding protein_coding MGP_129S1SvImJ_T0073620.1 MGP_129S1SvImJ_G0029953.1 mouse_genomes_project 5 117750626 117759303 + 2210016L21Rik protein_coding retained_intron MGP_129S1SvImJ_T0073621.1 MGP_129S1SvImJ_G0029953.1 mouse_genomes_project 5 117750632 117759269 + MGP_129S1SvImJ_P0073621 2210016L21Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073622.1 MGP_129S1SvImJ_G0029953.1 mouse_genomes_project 5 117750653 117758640 + 2210016L21Rik protein_coding retained_intron MGP_129S1SvImJ_T0073623.1 MGP_129S1SvImJ_G0029953.1 mouse_genomes_project 5 117758227 117760213 + MGP_129S1SvImJ_P0073623 2210016L21Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074248.1 MGP_129S1SvImJ_G0030067.1 mouse_genomes_project 5 126860774 126871691 - MGP_129S1SvImJ_P0074248 Hpd protein_coding protein_coding MGP_129S1SvImJ_T0074249.1 MGP_129S1SvImJ_G0030067.1 mouse_genomes_project 5 126860839 126861887 - Hpd protein_coding processed_transcript MGP_129S1SvImJ_T0074250.1 MGP_129S1SvImJ_G0030067.1 mouse_genomes_project 5 126861068 126864882 - MGP_129S1SvImJ_P0074250 Hpd protein_coding protein_coding MGP_129S1SvImJ_T0074251.1 MGP_129S1SvImJ_G0030067.1 mouse_genomes_project 5 126866495 126871686 - Hpd protein_coding retained_intron MGP_129S1SvImJ_T0074252.1 MGP_129S1SvImJ_G0030067.1 mouse_genomes_project 5 126866495 126871687 - MGP_129S1SvImJ_P0074252 Hpd protein_coding protein_coding MGP_129S1SvImJ_T0074253.1 MGP_129S1SvImJ_G0030067.1 mouse_genomes_project 5 126869622 126871031 - Hpd protein_coding processed_transcript MGP_129S1SvImJ_T0075700.1 MGP_129S1SvImJ_G0030335.1 mouse_genomes_project 5 148979495 148984425 + Cyth3 protein_coding retained_intron MGP_129S1SvImJ_T0075701.1 MGP_129S1SvImJ_G0030335.1 mouse_genomes_project 5 148979634 149070965 + MGP_129S1SvImJ_P0075701 Cyth3 protein_coding protein_coding MGP_129S1SvImJ_T0075702.1 MGP_129S1SvImJ_G0030335.1 mouse_genomes_project 5 148991826 149053365 + MGP_129S1SvImJ_P0075702 Cyth3 protein_coding protein_coding MGP_129S1SvImJ_T0075703.1 MGP_129S1SvImJ_G0030335.1 mouse_genomes_project 5 148994116 149053267 + MGP_129S1SvImJ_P0075703 Cyth3 protein_coding protein_coding MGP_129S1SvImJ_T0008078.1 MGP_129S1SvImJ_G0006596.1 mouse_genomes_project 5 23481771 23482121 - Gm10062 lincRNA lincRNA MGP_129S1SvImJ_T0008080.1 MGP_129S1SvImJ_G0006596.1 mouse_genomes_project 5 23481778 23483335 - Gm10062 lincRNA lincRNA MGP_129S1SvImJ_T0015063.1 MGP_129S1SvImJ_G0013152.1 mouse_genomes_project 5 79880116 79880134 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072516.1 MGP_129S1SvImJ_G0029716.1 mouse_genomes_project 5 90544842 90599383 + MGP_129S1SvImJ_P0072516 Npffr2 protein_coding protein_coding MGP_129S1SvImJ_T0015082.1 MGP_129S1SvImJ_G0013171.1 mouse_genomes_project 5 89550360 89550472 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073600.1 MGP_129S1SvImJ_G0029950.1 mouse_genomes_project 5 117660817 117663742 - MGP_129S1SvImJ_P0073600 Gm9936 protein_coding protein_coding MGP_129S1SvImJ_T0075403.1 MGP_129S1SvImJ_G0030274.1 mouse_genomes_project 5 143910435 143930934 - MGP_129S1SvImJ_P0075403 Pdgfa protein_coding protein_coding MGP_129S1SvImJ_T0075404.1 MGP_129S1SvImJ_G0030274.1 mouse_genomes_project 5 143910934 143930850 - MGP_129S1SvImJ_P0075404 Pdgfa protein_coding protein_coding MGP_129S1SvImJ_T0075405.1 MGP_129S1SvImJ_G0030274.1 mouse_genomes_project 5 143911359 143932823 - MGP_129S1SvImJ_P0075405 Pdgfa protein_coding protein_coding MGP_129S1SvImJ_T0075406.1 MGP_129S1SvImJ_G0030274.1 mouse_genomes_project 5 143911388 143934106 - MGP_129S1SvImJ_P0075406 Pdgfa protein_coding protein_coding MGP_129S1SvImJ_T0075407.1 MGP_129S1SvImJ_G0030274.1 mouse_genomes_project 5 143911562 143930178 - Pdgfa protein_coding processed_transcript MGP_129S1SvImJ_T0075408.1 MGP_129S1SvImJ_G0030274.1 mouse_genomes_project 5 143922170 143930381 - Pdgfa protein_coding processed_transcript MGP_129S1SvImJ_T0075409.1 MGP_129S1SvImJ_G0030274.1 mouse_genomes_project 5 143924341 143932737 - Pdgfa protein_coding processed_transcript MGP_129S1SvImJ_T0008069.1 MGP_129S1SvImJ_G0006589.1 mouse_genomes_project 5 21033565 21035094 + 4930580E04Rik lincRNA lincRNA MGP_129S1SvImJ_T0099936.1 MGP_129S1SvImJ_G0038003.1 mouse_genomes_project 5 84375296 84375418 - Gm25806 snRNA snRNA MGP_129S1SvImJ_T0070373.1 MGP_129S1SvImJ_G0029330.1 mouse_genomes_project 5 21160825 21279399 - MGP_129S1SvImJ_P0070373 Srpk2 protein_coding protein_coding MGP_129S1SvImJ_T0070374.1 MGP_129S1SvImJ_G0029330.1 mouse_genomes_project 5 21163010 21341879 - MGP_129S1SvImJ_P0070374 Srpk2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070375.1 MGP_129S1SvImJ_G0029330.1 mouse_genomes_project 5 21183335 21201666 - Srpk2 protein_coding processed_transcript MGP_129S1SvImJ_T0070376.1 MGP_129S1SvImJ_G0029330.1 mouse_genomes_project 5 21185542 21341472 - MGP_129S1SvImJ_P0070376 Srpk2 protein_coding protein_coding MGP_129S1SvImJ_T0070377.1 MGP_129S1SvImJ_G0029330.1 mouse_genomes_project 5 21204912 21341425 - Srpk2 protein_coding retained_intron MGP_129S1SvImJ_T0070378.1 MGP_129S1SvImJ_G0029330.1 mouse_genomes_project 5 21207314 21209726 - Srpk2 protein_coding retained_intron MGP_129S1SvImJ_T0070379.1 MGP_129S1SvImJ_G0029330.1 mouse_genomes_project 5 21207710 21350381 - MGP_129S1SvImJ_P0070379 Srpk2 protein_coding protein_coding MGP_129S1SvImJ_T0070380.1 MGP_129S1SvImJ_G0029330.1 mouse_genomes_project 5 21229301 21341786 - MGP_129S1SvImJ_P0070380 Srpk2 protein_coding protein_coding MGP_129S1SvImJ_T0070381.1 MGP_129S1SvImJ_G0029330.1 mouse_genomes_project 5 21229406 21350364 - MGP_129S1SvImJ_P0070381 Srpk2 protein_coding protein_coding MGP_129S1SvImJ_T0070382.1 MGP_129S1SvImJ_G0029330.1 mouse_genomes_project 5 21277590 21279420 - Srpk2 protein_coding retained_intron MGP_129S1SvImJ_T0071829.1 MGP_129S1SvImJ_G0029580.1 mouse_genomes_project 5 65085287 65136232 - MGP_129S1SvImJ_P0071829 Smim14 protein_coding protein_coding MGP_129S1SvImJ_T0071830.1 MGP_129S1SvImJ_G0029580.1 mouse_genomes_project 5 65088201 65135892 - MGP_129S1SvImJ_P0071830 Smim14 protein_coding protein_coding MGP_129S1SvImJ_T0071831.1 MGP_129S1SvImJ_G0029580.1 mouse_genomes_project 5 65088202 65135703 - MGP_129S1SvImJ_P0071831 Smim14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071832.1 MGP_129S1SvImJ_G0029580.1 mouse_genomes_project 5 65088325 65099690 - Smim14 protein_coding retained_intron MGP_129S1SvImJ_T0071833.1 MGP_129S1SvImJ_G0029580.1 mouse_genomes_project 5 65091405 65096898 - Smim14 protein_coding retained_intron MGP_129S1SvImJ_T0071834.1 MGP_129S1SvImJ_G0029580.1 mouse_genomes_project 5 65098944 65183048 - MGP_129S1SvImJ_P0071834 Smim14 protein_coding protein_coding MGP_129S1SvImJ_T0071835.1 MGP_129S1SvImJ_G0029580.1 mouse_genomes_project 5 65107159 65182993 - Smim14 protein_coding retained_intron MGP_129S1SvImJ_T0071836.1 MGP_129S1SvImJ_G0029580.1 mouse_genomes_project 5 65109107 65135713 - Smim14 protein_coding retained_intron MGP_129S1SvImJ_T0071837.1 MGP_129S1SvImJ_G0029580.1 mouse_genomes_project 5 65132776 65136232 - Smim14 protein_coding retained_intron MGP_129S1SvImJ_T0071133.1 MGP_129S1SvImJ_G0029461.1 mouse_genomes_project 5 32404926 32501976 - MGP_129S1SvImJ_P0071133 Zfyve28 protein_coding protein_coding MGP_129S1SvImJ_T0071134.1 MGP_129S1SvImJ_G0029461.1 mouse_genomes_project 5 32430596 32445490 - Zfyve28 protein_coding retained_intron MGP_129S1SvImJ_T0071135.1 MGP_129S1SvImJ_G0029461.1 mouse_genomes_project 5 32430681 32445952 - Zfyve28 protein_coding processed_transcript MGP_129S1SvImJ_T0071136.1 MGP_129S1SvImJ_G0029461.1 mouse_genomes_project 5 32434902 32456493 - Zfyve28 protein_coding retained_intron MGP_129S1SvImJ_T0071137.1 MGP_129S1SvImJ_G0029461.1 mouse_genomes_project 5 32439521 32502099 - Zfyve28 protein_coding processed_transcript MGP_129S1SvImJ_T0071138.1 MGP_129S1SvImJ_G0029461.1 mouse_genomes_project 5 32447345 32502087 - MGP_129S1SvImJ_P0071138 Zfyve28 protein_coding protein_coding MGP_129S1SvImJ_T0001899.1 MGP_129S1SvImJ_G0001812.1 mouse_genomes_project 5 138892715 138896924 - TEC TEC MGP_129S1SvImJ_T0001761.1 MGP_129S1SvImJ_G0001676.1 mouse_genomes_project 5 105737780 105740041 - TEC TEC MGP_129S1SvImJ_T0070093.1 MGP_129S1SvImJ_G0029276.1 mouse_genomes_project 5 2643553 2654286 - MGP_129S1SvImJ_P0070093 Steap1 protein_coding protein_coding MGP_129S1SvImJ_T0070094.1 MGP_129S1SvImJ_G0029276.1 mouse_genomes_project 5 2643561 2647634 - MGP_129S1SvImJ_P0070094 Steap1 protein_coding protein_coding MGP_129S1SvImJ_T0001699.1 MGP_129S1SvImJ_G0001615.1 mouse_genomes_project 5 69400530 69400854 - TEC TEC MGP_129S1SvImJ_T0015230.1 MGP_129S1SvImJ_G0013319.1 mouse_genomes_project 5 151762365 151762839 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075575.1 MGP_129S1SvImJ_G0030309.1 mouse_genomes_project 5 146397366 147423184 + MGP_129S1SvImJ_P0075575 Sdk1 protein_coding protein_coding MGP_129S1SvImJ_T0075576.1 MGP_129S1SvImJ_G0030309.1 mouse_genomes_project 5 146397794 146756020 + Sdk1 protein_coding retained_intron MGP_129S1SvImJ_T0075577.1 MGP_129S1SvImJ_G0030309.1 mouse_genomes_project 5 146536660 147146312 + Sdk1 protein_coding retained_intron MGP_129S1SvImJ_T0075578.1 MGP_129S1SvImJ_G0030309.1 mouse_genomes_project 5 147045015 147420791 + MGP_129S1SvImJ_P0075578 Sdk1 protein_coding protein_coding MGP_129S1SvImJ_T0070257.1 MGP_129S1SvImJ_G0029308.1 mouse_genomes_project 5 15681706 15781565 - MGP_129S1SvImJ_P0070257 Gnai1 protein_coding protein_coding MGP_129S1SvImJ_T0008394.1 MGP_129S1SvImJ_G0006816.1 mouse_genomes_project 5 130951349 130970961 + 4933438B17Rik lincRNA lincRNA MGP_129S1SvImJ_T0008395.1 MGP_129S1SvImJ_G0006816.1 mouse_genomes_project 5 130954755 131017852 + 4933438B17Rik lincRNA lincRNA MGP_129S1SvImJ_T0008396.1 MGP_129S1SvImJ_G0006816.1 mouse_genomes_project 5 130954762 130970816 + 4933438B17Rik lincRNA lincRNA MGP_129S1SvImJ_T0075329.1 MGP_129S1SvImJ_G0030258.1 mouse_genomes_project 5 142967984 142976377 + MGP_129S1SvImJ_P0075329 Ap4m1 protein_coding protein_coding MGP_129S1SvImJ_T0075330.1 MGP_129S1SvImJ_G0030258.1 mouse_genomes_project 5 142967987 142971009 + MGP_129S1SvImJ_P0075330 Ap4m1 protein_coding protein_coding MGP_129S1SvImJ_T0075331.1 MGP_129S1SvImJ_G0030258.1 mouse_genomes_project 5 142968029 142970368 + Ap4m1 protein_coding retained_intron MGP_129S1SvImJ_T0075332.1 MGP_129S1SvImJ_G0030258.1 mouse_genomes_project 5 142968050 142974643 + MGP_129S1SvImJ_P0075332 Ap4m1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075333.1 MGP_129S1SvImJ_G0030258.1 mouse_genomes_project 5 142968565 142970940 + Ap4m1 protein_coding retained_intron MGP_129S1SvImJ_T0075334.1 MGP_129S1SvImJ_G0030258.1 mouse_genomes_project 5 142970781 142973162 + Ap4m1 protein_coding retained_intron MGP_129S1SvImJ_T0075335.1 MGP_129S1SvImJ_G0030258.1 mouse_genomes_project 5 142972530 142974649 + Ap4m1 protein_coding retained_intron MGP_129S1SvImJ_T0072236.1 MGP_129S1SvImJ_G0029646.1 mouse_genomes_project 5 76782169 76840768 + Cep135 protein_coding retained_intron MGP_129S1SvImJ_T0072237.1 MGP_129S1SvImJ_G0029646.1 mouse_genomes_project 5 76782172 76842326 + MGP_129S1SvImJ_P0072237 Cep135 protein_coding protein_coding MGP_129S1SvImJ_T0072238.1 MGP_129S1SvImJ_G0029646.1 mouse_genomes_project 5 76785185 76842325 + MGP_129S1SvImJ_P0072238 Cep135 protein_coding protein_coding MGP_129S1SvImJ_T0004840.1 MGP_129S1SvImJ_G0004173.1 mouse_genomes_project 5 126219147 126222507 + Gm43301 antisense antisense MGP_129S1SvImJ_T0015101.1 MGP_129S1SvImJ_G0013190.1 mouse_genomes_project 5 101016457 101017266 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011629.1 MGP_129S1SvImJ_G0009745.1 mouse_genomes_project 5 114799340 114799475 - Gm27357 misc_RNA misc_RNA MGP_129S1SvImJ_T0008237.1 MGP_129S1SvImJ_G0006717.1 mouse_genomes_project 5 101666658 101674020 + 2310034O05Rik lincRNA lincRNA MGP_129S1SvImJ_T0008238.1 MGP_129S1SvImJ_G0006717.1 mouse_genomes_project 5 101666674 101672712 + 2310034O05Rik lincRNA lincRNA MGP_129S1SvImJ_T0001490.1 MGP_129S1SvImJ_G0001411.1 mouse_genomes_project 5 18665031 18665978 + TEC TEC MGP_129S1SvImJ_T0073697.1 MGP_129S1SvImJ_G0029971.1 mouse_genomes_project 5 118366434 118373798 - MGP_129S1SvImJ_P0073697 Sirt4 protein_coding protein_coding MGP_129S1SvImJ_T0073698.1 MGP_129S1SvImJ_G0029971.1 mouse_genomes_project 5 118366434 118374224 - MGP_129S1SvImJ_P0073698 Sirt4 protein_coding protein_coding MGP_129S1SvImJ_T0073699.1 MGP_129S1SvImJ_G0029971.1 mouse_genomes_project 5 118366437 118368083 - Sirt4 protein_coding retained_intron MGP_129S1SvImJ_T0073700.1 MGP_129S1SvImJ_G0029971.1 mouse_genomes_project 5 118368296 118372350 - Sirt4 protein_coding retained_intron MGP_129S1SvImJ_T0073701.1 MGP_129S1SvImJ_G0029971.1 mouse_genomes_project 5 118368367 118373846 - Sirt4 protein_coding processed_transcript MGP_129S1SvImJ_T0073702.1 MGP_129S1SvImJ_G0029971.1 mouse_genomes_project 5 118371955 118373867 - Sirt4 protein_coding retained_intron MGP_129S1SvImJ_T0001749.1 MGP_129S1SvImJ_G0001664.1 mouse_genomes_project 5 101912100 101913933 + TEC TEC MGP_129S1SvImJ_T0072224.1 MGP_129S1SvImJ_G0029645.1 mouse_genomes_project 5 76719576 76762540 + MGP_129S1SvImJ_P0072224 Exoc1 protein_coding protein_coding MGP_129S1SvImJ_T0072225.1 MGP_129S1SvImJ_G0029645.1 mouse_genomes_project 5 76719588 76762531 + MGP_129S1SvImJ_P0072225 Exoc1 protein_coding protein_coding MGP_129S1SvImJ_T0072226.1 MGP_129S1SvImJ_G0029645.1 mouse_genomes_project 5 76719593 76730001 + Exoc1 protein_coding retained_intron MGP_129S1SvImJ_T0072227.1 MGP_129S1SvImJ_G0029645.1 mouse_genomes_project 5 76719609 76753270 + Exoc1 protein_coding processed_transcript MGP_129S1SvImJ_T0072228.1 MGP_129S1SvImJ_G0029645.1 mouse_genomes_project 5 76719623 76731374 + Exoc1 protein_coding retained_intron MGP_129S1SvImJ_T0072229.1 MGP_129S1SvImJ_G0029645.1 mouse_genomes_project 5 76719623 76762533 + MGP_129S1SvImJ_P0072229 Exoc1 protein_coding protein_coding MGP_129S1SvImJ_T0072230.1 MGP_129S1SvImJ_G0029645.1 mouse_genomes_project 5 76732209 76739781 + Exoc1 protein_coding retained_intron MGP_129S1SvImJ_T0072231.1 MGP_129S1SvImJ_G0029645.1 mouse_genomes_project 5 76742911 76747103 + Exoc1 protein_coding retained_intron MGP_129S1SvImJ_T0072232.1 MGP_129S1SvImJ_G0029645.1 mouse_genomes_project 5 76751836 76759449 + Exoc1 protein_coding retained_intron MGP_129S1SvImJ_T0072233.1 MGP_129S1SvImJ_G0029645.1 mouse_genomes_project 5 76752703 76760262 + Exoc1 protein_coding retained_intron MGP_129S1SvImJ_T0072234.1 MGP_129S1SvImJ_G0029645.1 mouse_genomes_project 5 76752841 76759210 + MGP_129S1SvImJ_P0072234 Exoc1 protein_coding protein_coding MGP_129S1SvImJ_T0072235.1 MGP_129S1SvImJ_G0029645.1 mouse_genomes_project 5 76760127 76762235 + Exoc1 protein_coding retained_intron MGP_129S1SvImJ_T0001733.1 MGP_129S1SvImJ_G0001648.1 mouse_genomes_project 5 92900497 92901319 - TEC TEC MGP_129S1SvImJ_T0015088.1 MGP_129S1SvImJ_G0013177.1 mouse_genomes_project 5 91841447 91841761 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099951.1 MGP_129S1SvImJ_G0038018.1 mouse_genomes_project 5 106696839 106696946 + Gm24097 snRNA snRNA MGP_129S1SvImJ_T0001849.1 MGP_129S1SvImJ_G0001763.1 mouse_genomes_project 5 129154521 129157281 - TEC TEC MGP_129S1SvImJ_T0101192.1 MGP_129S1SvImJ_G0039259.1 mouse_genomes_project 5 63573794 63573926 - Gm25608 snoRNA snoRNA MGP_129S1SvImJ_T0008389.1 MGP_129S1SvImJ_G0006812.1 mouse_genomes_project 5 130613316 130646719 + Gm43757 lincRNA lincRNA MGP_129S1SvImJ_T0008390.1 MGP_129S1SvImJ_G0006812.1 mouse_genomes_project 5 130613338 130618159 + Gm43757 lincRNA lincRNA MGP_129S1SvImJ_T0001499.1 MGP_129S1SvImJ_G0001419.1 mouse_genomes_project 5 23512880 23514907 - TEC TEC MGP_129S1SvImJ_T0001681.1 MGP_129S1SvImJ_G0001597.1 mouse_genomes_project 5 66734096 66736253 + TEC TEC MGP_129S1SvImJ_T0075076.1 MGP_129S1SvImJ_G0030208.1 mouse_genomes_project 5 141415372 141575865 - MGP_129S1SvImJ_P0075076 Col26a1 protein_coding protein_coding MGP_129S1SvImJ_T0075077.1 MGP_129S1SvImJ_G0030208.1 mouse_genomes_project 5 141415372 141575928 - MGP_129S1SvImJ_P0075077 Col26a1 protein_coding protein_coding MGP_129S1SvImJ_T0075078.1 MGP_129S1SvImJ_G0030208.1 mouse_genomes_project 5 141416368 141418163 - Col26a1 protein_coding retained_intron MGP_129S1SvImJ_T0075079.1 MGP_129S1SvImJ_G0030208.1 mouse_genomes_project 5 141416687 141421315 - Col26a1 protein_coding retained_intron MGP_129S1SvImJ_T0075080.1 MGP_129S1SvImJ_G0030208.1 mouse_genomes_project 5 141427193 141575654 - Col26a1 protein_coding retained_intron MGP_129S1SvImJ_T0075081.1 MGP_129S1SvImJ_G0030208.1 mouse_genomes_project 5 141427912 141429864 - Col26a1 protein_coding retained_intron MGP_129S1SvImJ_T0075082.1 MGP_129S1SvImJ_G0030208.1 mouse_genomes_project 5 141431960 141575953 - Col26a1 protein_coding retained_intron MGP_129S1SvImJ_T0075083.1 MGP_129S1SvImJ_G0030208.1 mouse_genomes_project 5 141432134 141452499 - Col26a1 protein_coding processed_transcript MGP_129S1SvImJ_T0075084.1 MGP_129S1SvImJ_G0030208.1 mouse_genomes_project 5 141440861 141575487 - Col26a1 protein_coding processed_transcript MGP_129S1SvImJ_T0075085.1 MGP_129S1SvImJ_G0030208.1 mouse_genomes_project 5 141522689 141526359 - Col26a1 protein_coding retained_intron MGP_129S1SvImJ_T0075086.1 MGP_129S1SvImJ_G0030208.1 mouse_genomes_project 5 141523469 141575674 - Col26a1 protein_coding retained_intron MGP_129S1SvImJ_T0076015.1 MGP_129S1SvImJ_G0030402.1 mouse_genomes_project 5 155225023 155242996 + Medag protein_coding retained_intron MGP_129S1SvImJ_T0076016.1 MGP_129S1SvImJ_G0030402.1 mouse_genomes_project 5 155225229 155250061 + MGP_129S1SvImJ_P0076016 Medag protein_coding protein_coding MGP_129S1SvImJ_T0071828.1 MGP_129S1SvImJ_G0029579.1 mouse_genomes_project 5 65064569 65135665 - MGP_129S1SvImJ_P0071828 Gm43552 protein_coding protein_coding MGP_129S1SvImJ_T0008053.1 MGP_129S1SvImJ_G0006579.1 mouse_genomes_project 5 7338132 7438575 + Gm42831 lincRNA lincRNA MGP_129S1SvImJ_T0008054.1 MGP_129S1SvImJ_G0006579.1 mouse_genomes_project 5 7338182 7429902 + Gm42831 lincRNA lincRNA MGP_129S1SvImJ_T0008192.1 MGP_129S1SvImJ_G0006679.1 mouse_genomes_project 5 77223213 77235619 - 1700112J05Rik lincRNA lincRNA MGP_129S1SvImJ_T0071158.1 MGP_129S1SvImJ_G0029465.1 mouse_genomes_project 5 32735117 32754159 - MGP_129S1SvImJ_P0071158 Tnip2 protein_coding protein_coding MGP_129S1SvImJ_T0071159.1 MGP_129S1SvImJ_G0029465.1 mouse_genomes_project 5 32735117 32754131 - MGP_129S1SvImJ_P0071159 Tnip2 protein_coding protein_coding MGP_129S1SvImJ_T0071160.1 MGP_129S1SvImJ_G0029465.1 mouse_genomes_project 5 32735160 32754106 - MGP_129S1SvImJ_P0071160 Tnip2 protein_coding protein_coding MGP_129S1SvImJ_T0071161.1 MGP_129S1SvImJ_G0029465.1 mouse_genomes_project 5 32738635 32740649 - Tnip2 protein_coding retained_intron MGP_129S1SvImJ_T0071162.1 MGP_129S1SvImJ_G0029465.1 mouse_genomes_project 5 32740202 32754017 - Tnip2 protein_coding retained_intron MGP_129S1SvImJ_T0071163.1 MGP_129S1SvImJ_G0029465.1 mouse_genomes_project 5 32742316 32753828 - Tnip2 protein_coding retained_intron MGP_129S1SvImJ_T0073877.1 MGP_129S1SvImJ_G0030002.1 mouse_genomes_project 5 123813010 123827561 - MGP_129S1SvImJ_P0073877 Sdsl protein_coding protein_coding MGP_129S1SvImJ_T0073878.1 MGP_129S1SvImJ_G0030002.1 mouse_genomes_project 5 123813026 123827608 - MGP_129S1SvImJ_P0073878 Sdsl protein_coding protein_coding MGP_129S1SvImJ_T0073879.1 MGP_129S1SvImJ_G0030002.1 mouse_genomes_project 5 123815512 123822173 - MGP_129S1SvImJ_P0073879 Sdsl protein_coding protein_coding MGP_129S1SvImJ_T0008398.1 MGP_129S1SvImJ_G0006818.1 mouse_genomes_project 5 131098002 131111763 + 4930572K03Rik lincRNA lincRNA MGP_129S1SvImJ_T0008399.1 MGP_129S1SvImJ_G0006818.1 mouse_genomes_project 5 131098007 131111777 + 4930572K03Rik lincRNA lincRNA MGP_129S1SvImJ_T0001729.1 MGP_129S1SvImJ_G0001644.1 mouse_genomes_project 5 88267444 88268531 + TEC TEC MGP_129S1SvImJ_T0071946.1 MGP_129S1SvImJ_G0029592.1 mouse_genomes_project 5 66861517 66866438 - MGP_129S1SvImJ_P0071946 Phox2b protein_coding protein_coding MGP_129S1SvImJ_T0071947.1 MGP_129S1SvImJ_G0029592.1 mouse_genomes_project 5 66864180 66866194 - MGP_129S1SvImJ_P0071947 Phox2b protein_coding protein_coding MGP_129S1SvImJ_T0071948.1 MGP_129S1SvImJ_G0029593.1 mouse_genomes_project 5 67038828 67063402 + MGP_129S1SvImJ_P0071948 Tmem33 protein_coding protein_coding MGP_129S1SvImJ_T0071949.1 MGP_129S1SvImJ_G0029593.1 mouse_genomes_project 5 67038914 67042879 + MGP_129S1SvImJ_P0071949 Tmem33 protein_coding protein_coding MGP_129S1SvImJ_T0071950.1 MGP_129S1SvImJ_G0029593.1 mouse_genomes_project 5 67038959 67058600 + MGP_129S1SvImJ_P0071950 Tmem33 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071951.1 MGP_129S1SvImJ_G0029593.1 mouse_genomes_project 5 67038959 67046820 + MGP_129S1SvImJ_P0071951 Tmem33 protein_coding protein_coding MGP_129S1SvImJ_T0071952.1 MGP_129S1SvImJ_G0029593.1 mouse_genomes_project 5 67038960 67063402 + MGP_129S1SvImJ_P0071952 Tmem33 protein_coding protein_coding MGP_129S1SvImJ_T0071953.1 MGP_129S1SvImJ_G0029593.1 mouse_genomes_project 5 67038967 67042546 + MGP_129S1SvImJ_P0071953 Tmem33 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071954.1 MGP_129S1SvImJ_G0029593.1 mouse_genomes_project 5 67039017 67041340 + Tmem33 protein_coding retained_intron MGP_129S1SvImJ_T0071955.1 MGP_129S1SvImJ_G0029593.1 mouse_genomes_project 5 67039068 67063402 + MGP_129S1SvImJ_P0071955 Tmem33 protein_coding protein_coding MGP_129S1SvImJ_T0071956.1 MGP_129S1SvImJ_G0029593.1 mouse_genomes_project 5 67039159 67047258 + Tmem33 protein_coding retained_intron MGP_129S1SvImJ_T0004727.1 MGP_129S1SvImJ_G0004094.1 mouse_genomes_project 5 67425794 67430352 + Gm15478 antisense antisense MGP_129S1SvImJ_T0010738.1 MGP_129S1SvImJ_G0008854.1 mouse_genomes_project 5 138985901 138985940 + Mir7228 miRNA miRNA MGP_129S1SvImJ_T0004720.1 MGP_129S1SvImJ_G0004088.1 mouse_genomes_project 5 65881940 65908471 - 1700126H18Rik antisense antisense MGP_129S1SvImJ_T0099937.1 MGP_129S1SvImJ_G0038004.1 mouse_genomes_project 5 86634781 86634942 + Gm24626 snRNA snRNA MGP_129S1SvImJ_T0075395.1 MGP_129S1SvImJ_G0030272.1 mouse_genomes_project 5 143666084 143726748 + MGP_129S1SvImJ_P0075395 Fam20c protein_coding protein_coding MGP_129S1SvImJ_T0075396.1 MGP_129S1SvImJ_G0030272.1 mouse_genomes_project 5 143666653 143726052 + MGP_129S1SvImJ_P0075396 Fam20c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075397.1 MGP_129S1SvImJ_G0030272.1 mouse_genomes_project 5 143666657 143670420 + Fam20c protein_coding retained_intron MGP_129S1SvImJ_T0075398.1 MGP_129S1SvImJ_G0030272.1 mouse_genomes_project 5 143698204 143725830 + Fam20c protein_coding processed_transcript MGP_129S1SvImJ_T0075399.1 MGP_129S1SvImJ_G0030272.1 mouse_genomes_project 5 143700477 143721436 + Fam20c protein_coding processed_transcript MGP_129S1SvImJ_T0075400.1 MGP_129S1SvImJ_G0030272.1 mouse_genomes_project 5 143721286 143726076 + Fam20c protein_coding retained_intron MGP_129S1SvImJ_T0098978.1 MGP_129S1SvImJ_G0037052.1 mouse_genomes_project 5 155269125 155270846 + 4933425D22Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0072663.1 MGP_129S1SvImJ_G0029751.1 mouse_genomes_project 5 93613338 93633032 - MGP_129S1SvImJ_P0072663 Nup54 protein_coding protein_coding MGP_129S1SvImJ_T0072664.1 MGP_129S1SvImJ_G0029751.1 mouse_genomes_project 5 93614007 93615771 - Nup54 protein_coding retained_intron MGP_129S1SvImJ_T0072665.1 MGP_129S1SvImJ_G0029751.1 mouse_genomes_project 5 93620787 93622742 - Nup54 protein_coding retained_intron MGP_129S1SvImJ_T0072666.1 MGP_129S1SvImJ_G0029751.1 mouse_genomes_project 5 93623560 93632358 - Nup54 protein_coding processed_transcript MGP_129S1SvImJ_T0072667.1 MGP_129S1SvImJ_G0029751.1 mouse_genomes_project 5 93625863 93632904 - Nup54 protein_coding retained_intron MGP_129S1SvImJ_T0072668.1 MGP_129S1SvImJ_G0029751.1 mouse_genomes_project 5 93626134 93632927 - MGP_129S1SvImJ_P0072668 Nup54 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072669.1 MGP_129S1SvImJ_G0029751.1 mouse_genomes_project 5 93628736 93632936 - MGP_129S1SvImJ_P0072669 Nup54 protein_coding protein_coding MGP_129S1SvImJ_T0072670.1 MGP_129S1SvImJ_G0029751.1 mouse_genomes_project 5 93628744 93632570 - MGP_129S1SvImJ_P0072670 Nup54 protein_coding protein_coding MGP_129S1SvImJ_T0018155.1 MGP_129S1SvImJ_G0015591.1 mouse_genomes_project 5 22885236 22887261 + 2900005J15Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018156.1 MGP_129S1SvImJ_G0015591.1 mouse_genomes_project 5 22885711 22894364 + 2900005J15Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0073177.1 MGP_129S1SvImJ_G0029862.1 mouse_genomes_project 5 110790337 110816012 + MGP_129S1SvImJ_P0073177 Idua protein_coding protein_coding MGP_129S1SvImJ_T0073178.1 MGP_129S1SvImJ_G0029862.1 mouse_genomes_project 5 110799734 110816017 + MGP_129S1SvImJ_P0073178 Idua protein_coding protein_coding MGP_129S1SvImJ_T0073179.1 MGP_129S1SvImJ_G0029862.1 mouse_genomes_project 5 110799734 110816012 + MGP_129S1SvImJ_P0073179 Idua protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073180.1 MGP_129S1SvImJ_G0029862.1 mouse_genomes_project 5 110799923 110812407 + Idua protein_coding retained_intron MGP_129S1SvImJ_T0073181.1 MGP_129S1SvImJ_G0029862.1 mouse_genomes_project 5 110799939 110816012 + MGP_129S1SvImJ_P0073181 Idua protein_coding protein_coding MGP_129S1SvImJ_T0073182.1 MGP_129S1SvImJ_G0029862.1 mouse_genomes_project 5 110799975 110815859 + MGP_129S1SvImJ_P0073182 Idua protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073183.1 MGP_129S1SvImJ_G0029862.1 mouse_genomes_project 5 110800087 110810903 + Idua protein_coding processed_transcript MGP_129S1SvImJ_T0073188.1 MGP_129S1SvImJ_G0029862.1 mouse_genomes_project 5 110813110 110814769 + Idua protein_coding retained_intron MGP_129S1SvImJ_T0001741.1 MGP_129S1SvImJ_G0001656.1 mouse_genomes_project 5 98133646 98136881 + TEC TEC MGP_129S1SvImJ_T0014889.1 MGP_129S1SvImJ_G0012978.1 mouse_genomes_project 5 13875142 13876159 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072838.1 MGP_129S1SvImJ_G0029788.1 mouse_genomes_project 5 102045158 102068514 - MGP_129S1SvImJ_P0072838 Plac8 protein_coding protein_coding MGP_129S1SvImJ_T0072839.1 MGP_129S1SvImJ_G0029788.1 mouse_genomes_project 5 102045159 102057088 - MGP_129S1SvImJ_P0072839 Plac8 protein_coding protein_coding MGP_129S1SvImJ_T0072840.1 MGP_129S1SvImJ_G0029788.1 mouse_genomes_project 5 102045160 102057653 - MGP_129S1SvImJ_P0072840 Plac8 protein_coding protein_coding MGP_129S1SvImJ_T0072841.1 MGP_129S1SvImJ_G0029788.1 mouse_genomes_project 5 102056666 102068461 - Plac8 protein_coding retained_intron MGP_129S1SvImJ_T0075463.1 MGP_129S1SvImJ_G0030282.1 mouse_genomes_project 5 144330837 144443520 - MGP_129S1SvImJ_P0075463 3110082I17Rik protein_coding protein_coding MGP_129S1SvImJ_T0075464.1 MGP_129S1SvImJ_G0030282.1 mouse_genomes_project 5 144330837 144443545 - MGP_129S1SvImJ_P0075464 3110082I17Rik protein_coding protein_coding MGP_129S1SvImJ_T0075465.1 MGP_129S1SvImJ_G0030282.1 mouse_genomes_project 5 144334698 144443529 - 3110082I17Rik protein_coding retained_intron MGP_129S1SvImJ_T0075475.1 MGP_129S1SvImJ_G0030282.1 mouse_genomes_project 5 144392855 144436841 - 3110082I17Rik protein_coding processed_transcript MGP_129S1SvImJ_T0008175.1 MGP_129S1SvImJ_G0006665.1 mouse_genomes_project 5 73943972 73951476 + Gm43801 lincRNA lincRNA MGP_129S1SvImJ_T0072411.1 MGP_129S1SvImJ_G0029686.1 mouse_genomes_project 5 88440592 88473908 - MGP_129S1SvImJ_P0072411 Sult1b1 protein_coding protein_coding MGP_129S1SvImJ_T0072412.1 MGP_129S1SvImJ_G0029686.1 mouse_genomes_project 5 88440619 88471919 - MGP_129S1SvImJ_P0072412 Sult1b1 protein_coding protein_coding MGP_129S1SvImJ_T0072413.1 MGP_129S1SvImJ_G0029686.1 mouse_genomes_project 5 88441942 88470843 - MGP_129S1SvImJ_P0072413 Sult1b1 protein_coding protein_coding MGP_129S1SvImJ_T0014894.1 MGP_129S1SvImJ_G0012983.1 mouse_genomes_project 5 16648303 16648544 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001745.1 MGP_129S1SvImJ_G0001660.1 mouse_genomes_project 5 98323195 98323821 + TEC TEC MGP_129S1SvImJ_T0001898.1 MGP_129S1SvImJ_G0001811.1 mouse_genomes_project 5 138642644 138646305 - TEC TEC MGP_129S1SvImJ_T0074588.1 MGP_129S1SvImJ_G0030123.1 mouse_genomes_project 5 133077214 133082297 + MGP_129S1SvImJ_P0074588 Ran protein_coding unknown_likely_coding MGP_129S1SvImJ_T0074589.1 MGP_129S1SvImJ_G0030123.1 mouse_genomes_project 5 133077217 133082297 + MGP_129S1SvImJ_P0074589 Ran protein_coding unknown_likely_coding MGP_129S1SvImJ_T0074590.1 MGP_129S1SvImJ_G0030123.1 mouse_genomes_project 5 133077283 133077881 + Ran protein_coding processed_transcript MGP_129S1SvImJ_T0004784.1 MGP_129S1SvImJ_G0004132.1 mouse_genomes_project 5 109674559 109679100 - A930041C12Rik antisense antisense MGP_129S1SvImJ_T0004694.1 MGP_129S1SvImJ_G0004069.1 mouse_genomes_project 5 41761066 41843573 - Gm7854 antisense antisense MGP_129S1SvImJ_T0004695.1 MGP_129S1SvImJ_G0004069.1 mouse_genomes_project 5 41761066 41843943 - Gm7854 antisense antisense MGP_129S1SvImJ_T0004696.1 MGP_129S1SvImJ_G0004069.1 mouse_genomes_project 5 41843589 41843940 - Gm7854 antisense antisense MGP_129S1SvImJ_T0008416.1 MGP_129S1SvImJ_G0006828.1 mouse_genomes_project 5 136819707 136824258 + Gm42626 lincRNA lincRNA MGP_129S1SvImJ_T0074941.1 MGP_129S1SvImJ_G0030184.1 mouse_genomes_project 5 140108318 140112940 - MGP_129S1SvImJ_P0074941 Ccl26 protein_coding protein_coding MGP_129S1SvImJ_T0072371.1 MGP_129S1SvImJ_G0029667.1 mouse_genomes_project 5 87065833 87130981 - MGP_129S1SvImJ_P0072371 Tmprss11c protein_coding protein_coding MGP_129S1SvImJ_T0072372.1 MGP_129S1SvImJ_G0029667.1 mouse_genomes_project 5 87066104 87130933 - MGP_129S1SvImJ_P0072372 Tmprss11c protein_coding protein_coding MGP_129S1SvImJ_T0072759.1 MGP_129S1SvImJ_G0029773.1 mouse_genomes_project 5 99605142 99632376 + MGP_129S1SvImJ_P0072759 Fgf5 protein_coding protein_coding MGP_129S1SvImJ_T0072760.1 MGP_129S1SvImJ_G0029773.1 mouse_genomes_project 5 99605372 99630813 + MGP_129S1SvImJ_P0072760 Fgf5 protein_coding protein_coding MGP_129S1SvImJ_T0098971.1 MGP_129S1SvImJ_G0037048.1 mouse_genomes_project 5 148171528 148175821 - D430018E03Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0001823.1 MGP_129S1SvImJ_G0001738.1 mouse_genomes_project 5 124995837 124996926 + TEC TEC MGP_129S1SvImJ_T0010739.1 MGP_129S1SvImJ_G0008855.1 mouse_genomes_project 5 139908499 139908580 - Mir7033 miRNA miRNA MGP_129S1SvImJ_T0075215.1 MGP_129S1SvImJ_G0030234.1 mouse_genomes_project 5 142381212 142387628 - Pcolce protein_coding retained_intron MGP_129S1SvImJ_T0075216.1 MGP_129S1SvImJ_G0030234.1 mouse_genomes_project 5 142381212 142387707 - MGP_129S1SvImJ_P0075216 Pcolce protein_coding protein_coding MGP_129S1SvImJ_T0075217.1 MGP_129S1SvImJ_G0030234.1 mouse_genomes_project 5 142381214 142381901 - Pcolce protein_coding retained_intron MGP_129S1SvImJ_T0075218.1 MGP_129S1SvImJ_G0030234.1 mouse_genomes_project 5 142381214 142386681 - MGP_129S1SvImJ_P0075218 Pcolce protein_coding protein_coding MGP_129S1SvImJ_T0075219.1 MGP_129S1SvImJ_G0030234.1 mouse_genomes_project 5 142381217 142387587 - MGP_129S1SvImJ_P0075219 Pcolce protein_coding protein_coding MGP_129S1SvImJ_T0075220.1 MGP_129S1SvImJ_G0030234.1 mouse_genomes_project 5 142383188 142384397 - Pcolce protein_coding retained_intron MGP_129S1SvImJ_T0075221.1 MGP_129S1SvImJ_G0030234.1 mouse_genomes_project 5 142383255 142387554 - Pcolce protein_coding processed_transcript MGP_129S1SvImJ_T0075222.1 MGP_129S1SvImJ_G0030234.1 mouse_genomes_project 5 142383630 142386909 - MGP_129S1SvImJ_P0075222 Pcolce protein_coding protein_coding MGP_129S1SvImJ_T0075223.1 MGP_129S1SvImJ_G0030234.1 mouse_genomes_project 5 142383706 142389984 - MGP_129S1SvImJ_P0075223 Pcolce protein_coding protein_coding MGP_129S1SvImJ_T0075224.1 MGP_129S1SvImJ_G0030234.1 mouse_genomes_project 5 142383706 142390006 - MGP_129S1SvImJ_P0075224 Pcolce protein_coding protein_coding MGP_129S1SvImJ_T0075225.1 MGP_129S1SvImJ_G0030234.1 mouse_genomes_project 5 142383917 142387530 - Pcolce protein_coding retained_intron MGP_129S1SvImJ_T0075226.1 MGP_129S1SvImJ_G0030234.1 mouse_genomes_project 5 142385143 142387537 - Pcolce protein_coding processed_transcript MGP_129S1SvImJ_T0004697.1 MGP_129S1SvImJ_G0004070.1 mouse_genomes_project 5 42177784 42185674 - Gm15866 antisense antisense MGP_129S1SvImJ_T0004698.1 MGP_129S1SvImJ_G0004070.1 mouse_genomes_project 5 42185189 42229331 - Gm15866 antisense antisense MGP_129S1SvImJ_T0001475.1 MGP_129S1SvImJ_G0001396.1 mouse_genomes_project 5 11280428 11282288 + TEC TEC MGP_129S1SvImJ_T0008139.1 MGP_129S1SvImJ_G0006636.1 mouse_genomes_project 5 49020069 49027348 + 4930448I18Rik lincRNA lincRNA MGP_129S1SvImJ_T0073242.1 MGP_129S1SvImJ_G0029881.1 mouse_genomes_project 5 112619725 112668792 + MGP_129S1SvImJ_P0073242 Golga3 protein_coding protein_coding MGP_129S1SvImJ_T0073243.1 MGP_129S1SvImJ_G0029881.1 mouse_genomes_project 5 112619881 112630523 + Golga3 protein_coding retained_intron MGP_129S1SvImJ_T0073244.1 MGP_129S1SvImJ_G0029881.1 mouse_genomes_project 5 112619903 112628586 + MGP_129S1SvImJ_P0073244 Golga3 protein_coding protein_coding MGP_129S1SvImJ_T0073245.1 MGP_129S1SvImJ_G0029881.1 mouse_genomes_project 5 112619903 112665520 + MGP_129S1SvImJ_P0073245 Golga3 protein_coding protein_coding MGP_129S1SvImJ_T0073246.1 MGP_129S1SvImJ_G0029881.1 mouse_genomes_project 5 112619921 112632437 + Golga3 protein_coding retained_intron MGP_129S1SvImJ_T0070813.1 MGP_129S1SvImJ_G0029414.1 mouse_genomes_project 5 29142685 29167905 - Gtf3c2 protein_coding retained_intron MGP_129S1SvImJ_T0070814.1 MGP_129S1SvImJ_G0029414.1 mouse_genomes_project 5 29142685 29167917 - MGP_129S1SvImJ_P0070814 Gtf3c2 protein_coding protein_coding MGP_129S1SvImJ_T0070815.1 MGP_129S1SvImJ_G0029414.1 mouse_genomes_project 5 29143201 29167890 - MGP_129S1SvImJ_P0070815 Gtf3c2 protein_coding protein_coding MGP_129S1SvImJ_T0070816.1 MGP_129S1SvImJ_G0029414.1 mouse_genomes_project 5 29144124 29146062 - Gtf3c2 protein_coding retained_intron MGP_129S1SvImJ_T0070817.1 MGP_129S1SvImJ_G0029414.1 mouse_genomes_project 5 29146176 29152814 - Gtf3c2 protein_coding retained_intron MGP_129S1SvImJ_T0070818.1 MGP_129S1SvImJ_G0029414.1 mouse_genomes_project 5 29153812 29167682 - Gtf3c2 protein_coding retained_intron MGP_129S1SvImJ_T0070819.1 MGP_129S1SvImJ_G0029414.1 mouse_genomes_project 5 29160467 29167684 - Gtf3c2 protein_coding retained_intron MGP_129S1SvImJ_T0070820.1 MGP_129S1SvImJ_G0029414.1 mouse_genomes_project 5 29160787 29162275 - MGP_129S1SvImJ_P0070820 Gtf3c2 protein_coding protein_coding MGP_129S1SvImJ_T0070821.1 MGP_129S1SvImJ_G0029414.1 mouse_genomes_project 5 29161164 29167684 - MGP_129S1SvImJ_P0070821 Gtf3c2 protein_coding protein_coding MGP_129S1SvImJ_T0070822.1 MGP_129S1SvImJ_G0029414.1 mouse_genomes_project 5 29161577 29167622 - MGP_129S1SvImJ_P0070822 Gtf3c2 protein_coding protein_coding MGP_129S1SvImJ_T0070823.1 MGP_129S1SvImJ_G0029414.1 mouse_genomes_project 5 29161694 29162595 - MGP_129S1SvImJ_P0070823 Gtf3c2 protein_coding protein_coding MGP_129S1SvImJ_T0001476.1 MGP_129S1SvImJ_G0001397.1 mouse_genomes_project 5 11498354 11501246 + TEC TEC MGP_129S1SvImJ_T0004702.1 MGP_129S1SvImJ_G0004073.1 mouse_genomes_project 5 42861125 42865465 + Gm42982 antisense antisense MGP_129S1SvImJ_T0004645.1 MGP_129S1SvImJ_G0004026.1 mouse_genomes_project 5 303361 304809 - Gm42435 antisense antisense MGP_129S1SvImJ_T0015094.1 MGP_129S1SvImJ_G0013183.1 mouse_genomes_project 5 94607362 94609823 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101213.1 MGP_129S1SvImJ_G0039280.1 mouse_genomes_project 5 109966537 109966669 + Gm26387 snoRNA snoRNA MGP_129S1SvImJ_T0074741.1 MGP_129S1SvImJ_G0030152.1 mouse_genomes_project 5 138508784 138548223 - MGP_129S1SvImJ_P0074741 Wbscr16 protein_coding protein_coding MGP_129S1SvImJ_T0074742.1 MGP_129S1SvImJ_G0030152.1 mouse_genomes_project 5 138519376 138536315 - Wbscr16 protein_coding retained_intron MGP_129S1SvImJ_T0074743.1 MGP_129S1SvImJ_G0030152.1 mouse_genomes_project 5 138530554 138533963 - Wbscr16 protein_coding retained_intron MGP_129S1SvImJ_T0098958.1 MGP_129S1SvImJ_G0037036.1 mouse_genomes_project 5 100906878 100907617 - Gm16227 sense_intronic sense_intronic MGP_129S1SvImJ_T0073045.1 MGP_129S1SvImJ_G0029837.1 mouse_genomes_project 5 109464158 109467649 + MGP_129S1SvImJ_P0073045 Lpcat2b protein_coding protein_coding MGP_129S1SvImJ_T0072729.1 MGP_129S1SvImJ_G0029765.1 mouse_genomes_project 5 97596666 98029888 + MGP_129S1SvImJ_P0072729 Fras1 protein_coding protein_coding MGP_129S1SvImJ_T0072730.1 MGP_129S1SvImJ_G0029765.1 mouse_genomes_project 5 97596917 97779158 + Fras1 protein_coding retained_intron MGP_129S1SvImJ_T0072731.1 MGP_129S1SvImJ_G0029765.1 mouse_genomes_project 5 97597146 97612040 + Fras1 protein_coding retained_intron MGP_129S1SvImJ_T0072732.1 MGP_129S1SvImJ_G0029765.1 mouse_genomes_project 5 97853246 97876504 + Fras1 protein_coding processed_transcript MGP_129S1SvImJ_T0072733.1 MGP_129S1SvImJ_G0029765.1 mouse_genomes_project 5 97853463 97876616 + Fras1 protein_coding processed_transcript MGP_129S1SvImJ_T0072734.1 MGP_129S1SvImJ_G0029765.1 mouse_genomes_project 5 97868325 97876504 + Fras1 protein_coding processed_transcript MGP_129S1SvImJ_T0070861.1 MGP_129S1SvImJ_G0029419.1 mouse_genomes_project 5 29233209 29233767 - MGP_129S1SvImJ_P0070861 Gm9970 protein_coding protein_coding MGP_129S1SvImJ_T0072414.1 MGP_129S1SvImJ_G0029687.1 mouse_genomes_project 5 88492155 88507410 - MGP_129S1SvImJ_P0072414 Sult1d1 protein_coding protein_coding MGP_129S1SvImJ_T0072415.1 MGP_129S1SvImJ_G0029687.1 mouse_genomes_project 5 88494399 88498651 - Sult1d1 protein_coding processed_transcript MGP_129S1SvImJ_T0101212.1 MGP_129S1SvImJ_G0039279.1 mouse_genomes_project 5 109964384 109964516 + Gm22270 snoRNA snoRNA MGP_129S1SvImJ_T0008144.1 MGP_129S1SvImJ_G0006641.1 mouse_genomes_project 5 51588741 51600184 - 8030423F21Rik lincRNA lincRNA MGP_129S1SvImJ_T0001641.1 MGP_129S1SvImJ_G0001558.1 mouse_genomes_project 5 62135552 62136596 - TEC TEC MGP_129S1SvImJ_T0001460.1 MGP_129S1SvImJ_G0001381.1 mouse_genomes_project 5 5486837 5489222 - TEC TEC MGP_129S1SvImJ_T0075816.1 MGP_129S1SvImJ_G0030358.1 mouse_genomes_project 5 150565288 150573005 + MGP_129S1SvImJ_P0075816 Bud31 protein_coding protein_coding MGP_129S1SvImJ_T0075817.1 MGP_129S1SvImJ_G0030358.1 mouse_genomes_project 5 150565322 150566588 + Bud31 protein_coding retained_intron MGP_129S1SvImJ_T0075818.1 MGP_129S1SvImJ_G0030358.1 mouse_genomes_project 5 150565323 150573001 + MGP_129S1SvImJ_P0075818 Bud31 protein_coding protein_coding MGP_129S1SvImJ_T0075819.1 MGP_129S1SvImJ_G0030358.1 mouse_genomes_project 5 150565334 150573001 + MGP_129S1SvImJ_P0075819 Bud31 protein_coding protein_coding MGP_129S1SvImJ_T0075820.1 MGP_129S1SvImJ_G0030358.1 mouse_genomes_project 5 150565341 150572998 + MGP_129S1SvImJ_P0075820 Bud31 protein_coding protein_coding MGP_129S1SvImJ_T0075821.1 MGP_129S1SvImJ_G0030358.1 mouse_genomes_project 5 150567073 150569875 + Bud31 protein_coding retained_intron MGP_129S1SvImJ_T0075822.1 MGP_129S1SvImJ_G0030358.1 mouse_genomes_project 5 150569731 150572910 + Bud31 protein_coding retained_intron MGP_129S1SvImJ_T0001851.1 MGP_129S1SvImJ_G0001765.1 mouse_genomes_project 5 130351724 130352689 + TEC TEC MGP_129S1SvImJ_T0074572.1 MGP_129S1SvImJ_G0030121.1 mouse_genomes_project 5 132785639 132853718 - MGP_129S1SvImJ_P0074572 Rimbp2 protein_coding protein_coding MGP_129S1SvImJ_T0074573.1 MGP_129S1SvImJ_G0030121.1 mouse_genomes_project 5 132785643 132853671 - MGP_129S1SvImJ_P0074573 Rimbp2 protein_coding protein_coding MGP_129S1SvImJ_T0074574.1 MGP_129S1SvImJ_G0030121.1 mouse_genomes_project 5 132788251 133002400 - MGP_129S1SvImJ_P0074574 Rimbp2 protein_coding protein_coding MGP_129S1SvImJ_T0074575.1 MGP_129S1SvImJ_G0030121.1 mouse_genomes_project 5 132788251 133002701 - MGP_129S1SvImJ_P0074575 Rimbp2 protein_coding protein_coding MGP_129S1SvImJ_T0074576.1 MGP_129S1SvImJ_G0030121.1 mouse_genomes_project 5 132788532 133002825 - MGP_129S1SvImJ_P0074576 Rimbp2 protein_coding protein_coding MGP_129S1SvImJ_T0074577.1 MGP_129S1SvImJ_G0030121.1 mouse_genomes_project 5 132839131 132916541 - MGP_129S1SvImJ_P0074577 Rimbp2 protein_coding protein_coding MGP_129S1SvImJ_T0074578.1 MGP_129S1SvImJ_G0030121.1 mouse_genomes_project 5 132876888 133002378 - Rimbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0008432.1 MGP_129S1SvImJ_G0006841.1 mouse_genomes_project 5 143003743 143004208 + Gm43645 lincRNA lincRNA MGP_129S1SvImJ_T0073899.1 MGP_129S1SvImJ_G0030008.1 mouse_genomes_project 5 123978942 123997284 - MGP_129S1SvImJ_P0073899 Rita1 protein_coding protein_coding MGP_129S1SvImJ_T0073900.1 MGP_129S1SvImJ_G0030008.1 mouse_genomes_project 5 123987225 123996582 - MGP_129S1SvImJ_P0073900 Rita1 protein_coding protein_coding MGP_129S1SvImJ_T0073901.1 MGP_129S1SvImJ_G0030008.1 mouse_genomes_project 5 123987226 123990689 - Rita1 protein_coding processed_transcript MGP_129S1SvImJ_T0073902.1 MGP_129S1SvImJ_G0030008.1 mouse_genomes_project 5 123992007 123997534 - Rita1 protein_coding processed_transcript MGP_129S1SvImJ_T0073903.1 MGP_129S1SvImJ_G0030008.1 mouse_genomes_project 5 123994019 123997534 - MGP_129S1SvImJ_P0073903 Rita1 protein_coding protein_coding MGP_129S1SvImJ_T0073904.1 MGP_129S1SvImJ_G0030008.1 mouse_genomes_project 5 123994019 123997534 - MGP_129S1SvImJ_P0073904 Rita1 protein_coding protein_coding MGP_129S1SvImJ_T0073905.1 MGP_129S1SvImJ_G0030008.1 mouse_genomes_project 5 123994872 123997515 - MGP_129S1SvImJ_P0073905 Rita1 protein_coding protein_coding MGP_129S1SvImJ_T0004754.1 MGP_129S1SvImJ_G0004117.1 mouse_genomes_project 5 99539007 99541861 - A730035I17Rik antisense antisense MGP_129S1SvImJ_T0004755.1 MGP_129S1SvImJ_G0004117.1 mouse_genomes_project 5 99539023 99541087 - A730035I17Rik antisense antisense MGP_129S1SvImJ_T0004756.1 MGP_129S1SvImJ_G0004117.1 mouse_genomes_project 5 99539910 99541659 - A730035I17Rik antisense antisense MGP_129S1SvImJ_T0004757.1 MGP_129S1SvImJ_G0004117.1 mouse_genomes_project 5 99540333 99541090 - A730035I17Rik antisense antisense MGP_129S1SvImJ_T0004758.1 MGP_129S1SvImJ_G0004117.1 mouse_genomes_project 5 99541172 99541861 - A730035I17Rik antisense pseudogene MGP_129S1SvImJ_T0018193.1 MGP_129S1SvImJ_G0015603.1 mouse_genomes_project 5 67239780 67246718 + C330024D21Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018194.1 MGP_129S1SvImJ_G0015603.1 mouse_genomes_project 5 67239783 67254939 + C330024D21Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018195.1 MGP_129S1SvImJ_G0015603.1 mouse_genomes_project 5 67239786 67254605 + C330024D21Rik processed_transcript lincRNA MGP_129S1SvImJ_T0004730.1 MGP_129S1SvImJ_G0004096.1 mouse_genomes_project 5 67719567 67729005 - 4930425K10Rik antisense antisense MGP_129S1SvImJ_T0072847.1 MGP_129S1SvImJ_G0029791.1 mouse_genomes_project 5 102272511 102309954 - MGP_129S1SvImJ_P0072847 Helq protein_coding protein_coding MGP_129S1SvImJ_T0072848.1 MGP_129S1SvImJ_G0029791.1 mouse_genomes_project 5 102272517 102275805 - Helq protein_coding retained_intron MGP_129S1SvImJ_T0072849.1 MGP_129S1SvImJ_G0029791.1 mouse_genomes_project 5 102272813 102309824 - MGP_129S1SvImJ_P0072849 Helq protein_coding protein_coding MGP_129S1SvImJ_T0072850.1 MGP_129S1SvImJ_G0029791.1 mouse_genomes_project 5 102272822 102277180 - Helq protein_coding retained_intron MGP_129S1SvImJ_T0072851.1 MGP_129S1SvImJ_G0029791.1 mouse_genomes_project 5 102277103 102284399 - MGP_129S1SvImJ_P0072851 Helq protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072852.1 MGP_129S1SvImJ_G0029791.1 mouse_genomes_project 5 102281914 102284483 - Helq protein_coding retained_intron MGP_129S1SvImJ_T0072853.1 MGP_129S1SvImJ_G0029791.1 mouse_genomes_project 5 102288747 102294390 - Helq protein_coding retained_intron MGP_129S1SvImJ_T0072854.1 MGP_129S1SvImJ_G0029791.1 mouse_genomes_project 5 102294488 102304083 - Helq protein_coding processed_transcript MGP_129S1SvImJ_T0072855.1 MGP_129S1SvImJ_G0029791.1 mouse_genomes_project 5 102294569 102309933 - MGP_129S1SvImJ_P0072855 Helq protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072856.1 MGP_129S1SvImJ_G0029791.1 mouse_genomes_project 5 102303128 102304409 - Helq protein_coding retained_intron MGP_129S1SvImJ_T0075604.1 MGP_129S1SvImJ_G0030316.1 mouse_genomes_project 5 147948650 147974619 + MGP_129S1SvImJ_P0075604 Slc29a4 protein_coding protein_coding MGP_129S1SvImJ_T0075605.1 MGP_129S1SvImJ_G0030316.1 mouse_genomes_project 5 147961529 147994315 + MGP_129S1SvImJ_P0075605 Slc29a4 protein_coding protein_coding MGP_129S1SvImJ_T0071734.1 MGP_129S1SvImJ_G0029559.1 mouse_genomes_project 5 61321695 61324043 + MGP_129S1SvImJ_P0071734 G6pd2 protein_coding protein_coding MGP_129S1SvImJ_T0073362.1 MGP_129S1SvImJ_G0029903.1 mouse_genomes_project 5 114903252 114914914 + MGP_129S1SvImJ_P0073362 Tfip11 protein_coding protein_coding MGP_129S1SvImJ_T0073363.1 MGP_129S1SvImJ_G0029903.1 mouse_genomes_project 5 114903315 114908799 + MGP_129S1SvImJ_P0073363 Tfip11 protein_coding protein_coding MGP_129S1SvImJ_T0073364.1 MGP_129S1SvImJ_G0029903.1 mouse_genomes_project 5 114903386 114905077 + MGP_129S1SvImJ_P0073364 Tfip11 protein_coding protein_coding MGP_129S1SvImJ_T0073365.1 MGP_129S1SvImJ_G0029903.1 mouse_genomes_project 5 114912482 114914114 + Tfip11 protein_coding retained_intron MGP_129S1SvImJ_T0073624.1 MGP_129S1SvImJ_G0029954.1 mouse_genomes_project 5 117761408 117783247 - MGP_129S1SvImJ_P0073624 Hnf1a protein_coding protein_coding MGP_129S1SvImJ_T0073625.1 MGP_129S1SvImJ_G0029954.1 mouse_genomes_project 5 117762489 117783024 - MGP_129S1SvImJ_P0073625 Hnf1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073626.1 MGP_129S1SvImJ_G0029954.1 mouse_genomes_project 5 117765005 117783024 - MGP_129S1SvImJ_P0073626 Hnf1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073627.1 MGP_129S1SvImJ_G0029954.1 mouse_genomes_project 5 117780883 117783274 - Hnf1a protein_coding retained_intron MGP_129S1SvImJ_T0070342.1 MGP_129S1SvImJ_G0029326.1 mouse_genomes_project 5 19470484 19937042 - MGP_129S1SvImJ_P0070342 Reln protein_coding protein_coding MGP_129S1SvImJ_T0070343.1 MGP_129S1SvImJ_G0029326.1 mouse_genomes_project 5 19470926 19482043 - Reln protein_coding processed_transcript MGP_129S1SvImJ_T0070344.1 MGP_129S1SvImJ_G0029326.1 mouse_genomes_project 5 19471281 19937030 - MGP_129S1SvImJ_P0070344 Reln protein_coding protein_coding MGP_129S1SvImJ_T0070345.1 MGP_129S1SvImJ_G0029326.1 mouse_genomes_project 5 19476554 19479861 - Reln protein_coding retained_intron MGP_129S1SvImJ_T0070346.1 MGP_129S1SvImJ_G0029326.1 mouse_genomes_project 5 19480869 19485020 - Reln protein_coding processed_transcript MGP_129S1SvImJ_T0070347.1 MGP_129S1SvImJ_G0029326.1 mouse_genomes_project 5 19481607 19481963 - Reln protein_coding retained_intron MGP_129S1SvImJ_T0070348.1 MGP_129S1SvImJ_G0029326.1 mouse_genomes_project 5 19484697 19522427 - Reln protein_coding retained_intron MGP_129S1SvImJ_T0070349.1 MGP_129S1SvImJ_G0029326.1 mouse_genomes_project 5 19564509 19601414 - Reln protein_coding retained_intron MGP_129S1SvImJ_T0070350.1 MGP_129S1SvImJ_G0029326.1 mouse_genomes_project 5 19594188 19937030 - Reln protein_coding retained_intron MGP_129S1SvImJ_T0070351.1 MGP_129S1SvImJ_G0029326.1 mouse_genomes_project 5 19639847 19641077 - Reln protein_coding retained_intron MGP_129S1SvImJ_T0070352.1 MGP_129S1SvImJ_G0029326.1 mouse_genomes_project 5 19652635 19720236 - MGP_129S1SvImJ_P0070352 Reln protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070353.1 MGP_129S1SvImJ_G0029326.1 mouse_genomes_project 5 19713685 19937030 - Reln protein_coding retained_intron MGP_129S1SvImJ_T0070354.1 MGP_129S1SvImJ_G0029326.1 mouse_genomes_project 5 19759233 19937030 - Reln protein_coding retained_intron MGP_129S1SvImJ_T0070355.1 MGP_129S1SvImJ_G0029326.1 mouse_genomes_project 5 19811724 19937030 - Reln protein_coding retained_intron MGP_129S1SvImJ_T0070356.1 MGP_129S1SvImJ_G0029326.1 mouse_genomes_project 5 19934409 19937042 - Reln protein_coding processed_transcript MGP_129S1SvImJ_T0072486.1 MGP_129S1SvImJ_G0029709.1 mouse_genomes_project 5 89552619 89554248 + MGP_129S1SvImJ_P0072486 Utp3 protein_coding protein_coding MGP_129S1SvImJ_T0072753.1 MGP_129S1SvImJ_G0029769.1 mouse_genomes_project 5 98673835 98683967 - MGP_129S1SvImJ_P0072753 Naa11 protein_coding protein_coding MGP_129S1SvImJ_T0010697.1 MGP_129S1SvImJ_G0008813.1 mouse_genomes_project 5 47020735 47020845 + Mir218-1 miRNA miRNA MGP_129S1SvImJ_T0001518.1 MGP_129S1SvImJ_G0001436.1 mouse_genomes_project 5 30554261 30556726 + TEC TEC MGP_129S1SvImJ_T0099925.1 MGP_129S1SvImJ_G0037992.1 mouse_genomes_project 5 69773186 69773274 + Gm23661 snRNA snRNA MGP_129S1SvImJ_T0008330.1 MGP_129S1SvImJ_G0006773.1 mouse_genomes_project 5 118961255 118963432 - Gm13842 lincRNA lincRNA MGP_129S1SvImJ_T0008331.1 MGP_129S1SvImJ_G0006773.1 mouse_genomes_project 5 118961690 118963826 - Gm13842 lincRNA lincRNA MGP_129S1SvImJ_T0008372.1 MGP_129S1SvImJ_G0006802.1 mouse_genomes_project 5 126882842 126888888 - lincRNA lincRNA MGP_129S1SvImJ_T0004747.1 MGP_129S1SvImJ_G0004111.1 mouse_genomes_project 5 88940116 88942981 + BC051076 antisense antisense MGP_129S1SvImJ_T0004748.1 MGP_129S1SvImJ_G0004111.1 mouse_genomes_project 5 88940116 88942984 + BC051076 antisense antisense MGP_129S1SvImJ_T0072302.1 MGP_129S1SvImJ_G0029658.1 mouse_genomes_project 5 77583055 77627442 + MGP_129S1SvImJ_P0072302 Polr2b protein_coding protein_coding MGP_129S1SvImJ_T0072303.1 MGP_129S1SvImJ_G0029658.1 mouse_genomes_project 5 77583399 77586192 + Polr2b protein_coding retained_intron MGP_129S1SvImJ_T0072304.1 MGP_129S1SvImJ_G0029658.1 mouse_genomes_project 5 77604086 77605302 + Polr2b protein_coding retained_intron MGP_129S1SvImJ_T0072305.1 MGP_129S1SvImJ_G0029658.1 mouse_genomes_project 5 77618474 77621049 + Polr2b protein_coding retained_intron MGP_129S1SvImJ_T0099910.1 MGP_129S1SvImJ_G0037977.1 mouse_genomes_project 5 30242455 30242562 + Gm26335 snRNA snRNA MGP_129S1SvImJ_T0070621.1 MGP_129S1SvImJ_G0029380.1 mouse_genomes_project 5 27989531 27996542 + MGP_129S1SvImJ_P0070621 Il6 protein_coding protein_coding MGP_129S1SvImJ_T0070622.1 MGP_129S1SvImJ_G0029380.1 mouse_genomes_project 5 27989579 27995094 + MGP_129S1SvImJ_P0070622 Il6 protein_coding protein_coding MGP_129S1SvImJ_T0071255.1 MGP_129S1SvImJ_G0029476.1 mouse_genomes_project 5 33352499 33366826 - MGP_129S1SvImJ_P0071255 Lrpap1 protein_coding protein_coding MGP_129S1SvImJ_T0071256.1 MGP_129S1SvImJ_G0029476.1 mouse_genomes_project 5 33354067 33363574 - MGP_129S1SvImJ_P0071256 Lrpap1 protein_coding protein_coding MGP_129S1SvImJ_T0071257.1 MGP_129S1SvImJ_G0029476.1 mouse_genomes_project 5 33354293 33366749 - Lrpap1 protein_coding retained_intron MGP_129S1SvImJ_T0071258.1 MGP_129S1SvImJ_G0029476.1 mouse_genomes_project 5 33363187 33366756 - Lrpap1 protein_coding retained_intron MGP_129S1SvImJ_T0071259.1 MGP_129S1SvImJ_G0029476.1 mouse_genomes_project 5 33363568 33365600 - Lrpap1 protein_coding processed_transcript MGP_129S1SvImJ_T0014994.1 MGP_129S1SvImJ_G0013083.1 mouse_genomes_project 5 49962565 49963046 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072106.1 MGP_129S1SvImJ_G0029623.1 mouse_genomes_project 5 73286233 73307184 + MGP_129S1SvImJ_P0072106 Ociad1 protein_coding protein_coding MGP_129S1SvImJ_T0072107.1 MGP_129S1SvImJ_G0029623.1 mouse_genomes_project 5 73286241 73307296 + MGP_129S1SvImJ_P0072107 Ociad1 protein_coding protein_coding MGP_129S1SvImJ_T0072108.1 MGP_129S1SvImJ_G0029623.1 mouse_genomes_project 5 73286242 73302821 + MGP_129S1SvImJ_P0072108 Ociad1 protein_coding protein_coding MGP_129S1SvImJ_T0072109.1 MGP_129S1SvImJ_G0029623.1 mouse_genomes_project 5 73286256 73300238 + MGP_129S1SvImJ_P0072109 Ociad1 protein_coding protein_coding MGP_129S1SvImJ_T0072110.1 MGP_129S1SvImJ_G0029623.1 mouse_genomes_project 5 73286281 73307141 + MGP_129S1SvImJ_P0072110 Ociad1 protein_coding protein_coding MGP_129S1SvImJ_T0072111.1 MGP_129S1SvImJ_G0029623.1 mouse_genomes_project 5 73286290 73303872 + MGP_129S1SvImJ_P0072111 Ociad1 protein_coding protein_coding MGP_129S1SvImJ_T0072112.1 MGP_129S1SvImJ_G0029623.1 mouse_genomes_project 5 73286344 73307168 + MGP_129S1SvImJ_P0072112 Ociad1 protein_coding protein_coding MGP_129S1SvImJ_T0072113.1 MGP_129S1SvImJ_G0029623.1 mouse_genomes_project 5 73286502 73288436 + MGP_129S1SvImJ_P0072113 Ociad1 protein_coding protein_coding MGP_129S1SvImJ_T0072114.1 MGP_129S1SvImJ_G0029623.1 mouse_genomes_project 5 73288459 73307168 + MGP_129S1SvImJ_P0072114 Ociad1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072115.1 MGP_129S1SvImJ_G0029623.1 mouse_genomes_project 5 73297580 73298613 + Ociad1 protein_coding retained_intron MGP_129S1SvImJ_T0008336.1 MGP_129S1SvImJ_G0006778.1 mouse_genomes_project 5 119667068 119872653 - Gm43122 lincRNA lincRNA MGP_129S1SvImJ_T0008338.1 MGP_129S1SvImJ_G0006778.1 mouse_genomes_project 5 119860342 119872687 - Gm43122 lincRNA lincRNA MGP_129S1SvImJ_T0001636.1 MGP_129S1SvImJ_G0001553.1 mouse_genomes_project 5 57360559 57362283 + TEC TEC MGP_129S1SvImJ_T0099945.1 MGP_129S1SvImJ_G0038012.1 mouse_genomes_project 5 97084606 97084713 + Gm25937 snRNA snRNA MGP_129S1SvImJ_T0015122.1 MGP_129S1SvImJ_G0013211.1 mouse_genomes_project 5 108219770 108220626 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0071067.1 MGP_129S1SvImJ_G0029452.1 mouse_genomes_project 5 31916163 31924327 + MGP_129S1SvImJ_P0071067 Fgfr3 protein_coding protein_coding MGP_129S1SvImJ_T0071068.1 MGP_129S1SvImJ_G0029452.1 mouse_genomes_project 5 31916213 31931558 + MGP_129S1SvImJ_P0071068 Fgfr3 protein_coding protein_coding MGP_129S1SvImJ_T0071069.1 MGP_129S1SvImJ_G0029452.1 mouse_genomes_project 5 31916213 31931557 + MGP_129S1SvImJ_P0071069 Fgfr3 protein_coding protein_coding MGP_129S1SvImJ_T0071070.1 MGP_129S1SvImJ_G0029452.1 mouse_genomes_project 5 31916213 31931558 + MGP_129S1SvImJ_P0071070 Fgfr3 protein_coding protein_coding MGP_129S1SvImJ_T0071071.1 MGP_129S1SvImJ_G0029452.1 mouse_genomes_project 5 31916280 31931553 + MGP_129S1SvImJ_P0071071 Fgfr3 protein_coding protein_coding MGP_129S1SvImJ_T0071072.1 MGP_129S1SvImJ_G0029452.1 mouse_genomes_project 5 31916287 31930097 + MGP_129S1SvImJ_P0071072 Fgfr3 protein_coding protein_coding MGP_129S1SvImJ_T0071073.1 MGP_129S1SvImJ_G0029452.1 mouse_genomes_project 5 31916795 31931558 + MGP_129S1SvImJ_P0071073 Fgfr3 protein_coding protein_coding MGP_129S1SvImJ_T0071074.1 MGP_129S1SvImJ_G0029452.1 mouse_genomes_project 5 31916795 31931558 + MGP_129S1SvImJ_P0071074 Fgfr3 protein_coding protein_coding MGP_129S1SvImJ_T0071075.1 MGP_129S1SvImJ_G0029452.1 mouse_genomes_project 5 31916933 31924496 + MGP_129S1SvImJ_P0071075 Fgfr3 protein_coding protein_coding MGP_129S1SvImJ_T0071076.1 MGP_129S1SvImJ_G0029452.1 mouse_genomes_project 5 31917309 31927280 + Fgfr3 protein_coding retained_intron MGP_129S1SvImJ_T0071077.1 MGP_129S1SvImJ_G0029452.1 mouse_genomes_project 5 31918261 31924340 + MGP_129S1SvImJ_P0071077 Fgfr3 protein_coding protein_coding MGP_129S1SvImJ_T0071078.1 MGP_129S1SvImJ_G0029452.1 mouse_genomes_project 5 31924227 31927233 + MGP_129S1SvImJ_P0071078 Fgfr3 protein_coding protein_coding MGP_129S1SvImJ_T0071079.1 MGP_129S1SvImJ_G0029452.1 mouse_genomes_project 5 31924453 31927773 + Fgfr3 protein_coding retained_intron MGP_129S1SvImJ_T0071080.1 MGP_129S1SvImJ_G0029452.1 mouse_genomes_project 5 31924710 31928251 + MGP_129S1SvImJ_P0071080 Fgfr3 protein_coding protein_coding MGP_129S1SvImJ_T0071081.1 MGP_129S1SvImJ_G0029452.1 mouse_genomes_project 5 31927741 31929342 + MGP_129S1SvImJ_P0071081 Fgfr3 protein_coding protein_coding MGP_129S1SvImJ_T0071082.1 MGP_129S1SvImJ_G0029452.1 mouse_genomes_project 5 31928181 31929403 + Fgfr3 protein_coding retained_intron MGP_129S1SvImJ_T0071083.1 MGP_129S1SvImJ_G0029452.1 mouse_genomes_project 5 31929094 31930054 + Fgfr3 protein_coding retained_intron MGP_129S1SvImJ_T0072571.1 MGP_129S1SvImJ_G0029731.1 mouse_genomes_project 5 91983099 91984968 + MGP_129S1SvImJ_P0072571 Cxcl1 protein_coding protein_coding MGP_129S1SvImJ_T0072572.1 MGP_129S1SvImJ_G0029731.1 mouse_genomes_project 5 91983101 91984966 + Cxcl1 protein_coding retained_intron MGP_129S1SvImJ_T0015245.1 MGP_129S1SvImJ_G0013334.1 mouse_genomes_project 5 156448751 156450499 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073962.1 MGP_129S1SvImJ_G0030025.1 mouse_genomes_project 5 124847147 124848554 - Trafd1 protein_coding retained_intron MGP_129S1SvImJ_T0073963.1 MGP_129S1SvImJ_G0030025.1 mouse_genomes_project 5 124847147 124854041 - MGP_129S1SvImJ_P0073963 Trafd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073964.1 MGP_129S1SvImJ_G0030025.1 mouse_genomes_project 5 124847147 124860831 - MGP_129S1SvImJ_P0073964 Trafd1 protein_coding protein_coding MGP_129S1SvImJ_T0073965.1 MGP_129S1SvImJ_G0030025.1 mouse_genomes_project 5 124847152 124860770 - MGP_129S1SvImJ_P0073965 Trafd1 protein_coding protein_coding MGP_129S1SvImJ_T0073966.1 MGP_129S1SvImJ_G0030025.1 mouse_genomes_project 5 124847154 124848897 - MGP_129S1SvImJ_P0073966 Trafd1 protein_coding protein_coding MGP_129S1SvImJ_T0073967.1 MGP_129S1SvImJ_G0030025.1 mouse_genomes_project 5 124853848 124860638 - MGP_129S1SvImJ_P0073967 Trafd1 protein_coding protein_coding MGP_129S1SvImJ_T0073968.1 MGP_129S1SvImJ_G0030025.1 mouse_genomes_project 5 124854094 124860776 - MGP_129S1SvImJ_P0073968 Trafd1 protein_coding protein_coding MGP_129S1SvImJ_T0073969.1 MGP_129S1SvImJ_G0030025.1 mouse_genomes_project 5 124854813 124860828 - MGP_129S1SvImJ_P0073969 Trafd1 protein_coding protein_coding MGP_129S1SvImJ_T0073970.1 MGP_129S1SvImJ_G0030025.1 mouse_genomes_project 5 124859382 124860589 - Trafd1 protein_coding processed_transcript MGP_129S1SvImJ_T0008439.1 MGP_129S1SvImJ_G0006847.1 mouse_genomes_project 5 148546596 148555827 + 4930448H16Rik lincRNA lincRNA MGP_129S1SvImJ_T0099961.1 MGP_129S1SvImJ_G0038028.1 mouse_genomes_project 5 121109403 121109510 - Gm25343 snRNA snRNA MGP_129S1SvImJ_T0075783.1 MGP_129S1SvImJ_G0030353.1 mouse_genomes_project 5 150268787 150278783 - Smurf1 protein_coding retained_intron MGP_129S1SvImJ_T0075784.1 MGP_129S1SvImJ_G0030353.1 mouse_genomes_project 5 150268787 150359458 - MGP_129S1SvImJ_P0075784 Smurf1 protein_coding protein_coding MGP_129S1SvImJ_T0075785.1 MGP_129S1SvImJ_G0030353.1 mouse_genomes_project 5 150268794 150359466 - MGP_129S1SvImJ_P0075785 Smurf1 protein_coding protein_coding MGP_129S1SvImJ_T0075786.1 MGP_129S1SvImJ_G0030353.1 mouse_genomes_project 5 150271402 150359466 - MGP_129S1SvImJ_P0075786 Smurf1 protein_coding protein_coding MGP_129S1SvImJ_T0075787.1 MGP_129S1SvImJ_G0030353.1 mouse_genomes_project 5 150276873 150289825 - MGP_129S1SvImJ_P0075787 Smurf1 protein_coding protein_coding MGP_129S1SvImJ_T0074756.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138611719 138700031 - MGP_129S1SvImJ_P0074756 Gtf2i protein_coding protein_coding MGP_129S1SvImJ_T0074757.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138611722 138700017 - MGP_129S1SvImJ_P0074757 Gtf2i protein_coding protein_coding MGP_129S1SvImJ_T0074758.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138611722 138700017 - MGP_129S1SvImJ_P0074758 Gtf2i protein_coding protein_coding MGP_129S1SvImJ_T0074759.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138611724 138692645 - MGP_129S1SvImJ_P0074759 Gtf2i protein_coding protein_coding MGP_129S1SvImJ_T0074760.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138611727 138692645 - MGP_129S1SvImJ_P0074760 Gtf2i protein_coding protein_coding MGP_129S1SvImJ_T0074761.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138611728 138655436 - Gtf2i protein_coding processed_transcript MGP_129S1SvImJ_T0074762.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138611728 138673851 - MGP_129S1SvImJ_P0074762 Gtf2i protein_coding protein_coding MGP_129S1SvImJ_T0074763.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138611728 138673851 - MGP_129S1SvImJ_P0074763 Gtf2i protein_coding protein_coding MGP_129S1SvImJ_T0074764.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138611728 138673851 - MGP_129S1SvImJ_P0074764 Gtf2i protein_coding protein_coding MGP_129S1SvImJ_T0074765.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138611728 138673851 - MGP_129S1SvImJ_P0074765 Gtf2i protein_coding protein_coding MGP_129S1SvImJ_T0074766.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138612382 138617448 - MGP_129S1SvImJ_P0074766 Gtf2i protein_coding protein_coding MGP_129S1SvImJ_T0074767.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138612728 138616297 - Gtf2i protein_coding retained_intron MGP_129S1SvImJ_T0074768.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138613398 138673846 - MGP_129S1SvImJ_P0074768 Gtf2i protein_coding protein_coding MGP_129S1SvImJ_T0074769.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138613540 138614931 - Gtf2i protein_coding retained_intron MGP_129S1SvImJ_T0074770.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138614522 138618638 - Gtf2i protein_coding retained_intron MGP_129S1SvImJ_T0074771.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138616637 138617630 - Gtf2i protein_coding retained_intron MGP_129S1SvImJ_T0074772.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138629697 138648206 - Gtf2i protein_coding retained_intron MGP_129S1SvImJ_T0074773.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138629723 138673796 - MGP_129S1SvImJ_P0074773 Gtf2i protein_coding protein_coding MGP_129S1SvImJ_T0074774.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138633721 138635050 - Gtf2i protein_coding processed_transcript MGP_129S1SvImJ_T0074775.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138634815 138641357 - Gtf2i protein_coding processed_transcript MGP_129S1SvImJ_T0074776.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138639273 138650612 - Gtf2i protein_coding processed_transcript MGP_129S1SvImJ_T0074777.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138662479 138692431 - MGP_129S1SvImJ_P0074777 Gtf2i protein_coding protein_coding MGP_129S1SvImJ_T0074778.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138662510 138689778 - MGP_129S1SvImJ_P0074778 Gtf2i protein_coding protein_coding MGP_129S1SvImJ_T0074779.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138662510 138690073 - MGP_129S1SvImJ_P0074779 Gtf2i protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074780.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138662536 138692645 - MGP_129S1SvImJ_P0074780 Gtf2i protein_coding protein_coding MGP_129S1SvImJ_T0074781.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138664796 138684660 - Gtf2i protein_coding retained_intron MGP_129S1SvImJ_T0074782.1 MGP_129S1SvImJ_G0030155.1 mouse_genomes_project 5 138673248 138675412 - Gtf2i protein_coding retained_intron MGP_129S1SvImJ_T0101194.1 MGP_129S1SvImJ_G0039261.1 mouse_genomes_project 5 65467263 65467457 + Gm24346 snoRNA snoRNA MGP_129S1SvImJ_T0008433.1 MGP_129S1SvImJ_G0006842.1 mouse_genomes_project 5 144515058 144535927 + 4930500L23Rik lincRNA lincRNA MGP_129S1SvImJ_T0008403.1 MGP_129S1SvImJ_G0006822.1 mouse_genomes_project 5 132459712 132460594 + Gm42500 lincRNA lincRNA MGP_129S1SvImJ_T0001797.1 MGP_129S1SvImJ_G0001712.1 mouse_genomes_project 5 118296891 118298792 - TEC TEC MGP_129S1SvImJ_T0008258.1 MGP_129S1SvImJ_G0006729.1 mouse_genomes_project 5 107290390 107297154 + Gm26519 lincRNA lincRNA MGP_129S1SvImJ_T0070862.1 MGP_129S1SvImJ_G0029420.1 mouse_genomes_project 5 29233398 29244106 + MGP_129S1SvImJ_P0070862 Nrbp1 protein_coding protein_coding MGP_129S1SvImJ_T0070863.1 MGP_129S1SvImJ_G0029420.1 mouse_genomes_project 5 29233398 29244100 + MGP_129S1SvImJ_P0070863 Nrbp1 protein_coding protein_coding MGP_129S1SvImJ_T0070864.1 MGP_129S1SvImJ_G0029420.1 mouse_genomes_project 5 29233411 29237489 + MGP_129S1SvImJ_P0070864 Nrbp1 protein_coding protein_coding MGP_129S1SvImJ_T0070865.1 MGP_129S1SvImJ_G0029420.1 mouse_genomes_project 5 29233429 29238375 + Nrbp1 protein_coding retained_intron MGP_129S1SvImJ_T0070866.1 MGP_129S1SvImJ_G0029420.1 mouse_genomes_project 5 29233437 29237410 + MGP_129S1SvImJ_P0070866 Nrbp1 protein_coding protein_coding MGP_129S1SvImJ_T0070867.1 MGP_129S1SvImJ_G0029420.1 mouse_genomes_project 5 29233466 29240454 + MGP_129S1SvImJ_P0070867 Nrbp1 protein_coding protein_coding MGP_129S1SvImJ_T0070868.1 MGP_129S1SvImJ_G0029420.1 mouse_genomes_project 5 29235955 29236964 + Nrbp1 protein_coding retained_intron MGP_129S1SvImJ_T0070869.1 MGP_129S1SvImJ_G0029420.1 mouse_genomes_project 5 29239962 29242521 + Nrbp1 protein_coding retained_intron MGP_129S1SvImJ_T0070870.1 MGP_129S1SvImJ_G0029420.1 mouse_genomes_project 5 29241894 29244103 + Nrbp1 protein_coding retained_intron MGP_129S1SvImJ_T0070871.1 MGP_129S1SvImJ_G0029420.1 mouse_genomes_project 5 29242130 29243273 + Nrbp1 protein_coding retained_intron MGP_129S1SvImJ_T0070872.1 MGP_129S1SvImJ_G0029420.1 mouse_genomes_project 5 29242884 29243989 + Nrbp1 protein_coding retained_intron MGP_129S1SvImJ_T0072543.1 MGP_129S1SvImJ_G0029721.1 mouse_genomes_project 5 91540812 91556763 + MGP_129S1SvImJ_P0072543 Alb protein_coding protein_coding MGP_129S1SvImJ_T0072544.1 MGP_129S1SvImJ_G0029721.1 mouse_genomes_project 5 91542234 91542638 + Alb protein_coding processed_transcript MGP_129S1SvImJ_T0072545.1 MGP_129S1SvImJ_G0029721.1 mouse_genomes_project 5 91542615 91554822 + Alb protein_coding processed_transcript MGP_129S1SvImJ_T0010694.1 MGP_129S1SvImJ_G0008810.1 mouse_genomes_project 5 33280597 33280664 + Mir3097 miRNA miRNA MGP_129S1SvImJ_T0001744.1 MGP_129S1SvImJ_G0001659.1 mouse_genomes_project 5 98210236 98210721 + TEC TEC MGP_129S1SvImJ_T0073462.1 MGP_129S1SvImJ_G0029925.1 mouse_genomes_project 5 116502101 116503126 - MGP_129S1SvImJ_P0073462 Selplg protein_coding protein_coding MGP_129S1SvImJ_T0073463.1 MGP_129S1SvImJ_G0029925.1 mouse_genomes_project 5 116502112 116513927 - MGP_129S1SvImJ_P0073463 Selplg protein_coding protein_coding MGP_129S1SvImJ_T0073464.1 MGP_129S1SvImJ_G0029925.1 mouse_genomes_project 5 116502120 116502883 - MGP_129S1SvImJ_P0073464 Selplg protein_coding protein_coding MGP_129S1SvImJ_T0073465.1 MGP_129S1SvImJ_G0029925.1 mouse_genomes_project 5 116502120 116502823 - MGP_129S1SvImJ_P0073465 Selplg protein_coding protein_coding MGP_129S1SvImJ_T0073466.1 MGP_129S1SvImJ_G0029925.1 mouse_genomes_project 5 116503611 116516072 - MGP_129S1SvImJ_P0073466 Selplg protein_coding protein_coding MGP_129S1SvImJ_T0073467.1 MGP_129S1SvImJ_G0029925.1 mouse_genomes_project 5 116511586 116513898 - Selplg protein_coding retained_intron MGP_129S1SvImJ_T0102589.1 MGP_129S1SvImJ_G0040422.1 mouse_genomes_project 5 157500451 157545981 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0075974.1 MGP_129S1SvImJ_G0030395.1 mouse_genomes_project 5 154055923 154131915 - MGP_129S1SvImJ_P0075974 Slc7a1 protein_coding protein_coding MGP_129S1SvImJ_T0075975.1 MGP_129S1SvImJ_G0030395.1 mouse_genomes_project 5 154063026 154124825 - MGP_129S1SvImJ_P0075975 Slc7a1 protein_coding protein_coding MGP_129S1SvImJ_T0075976.1 MGP_129S1SvImJ_G0030395.1 mouse_genomes_project 5 154068680 154070831 - Slc7a1 protein_coding retained_intron MGP_129S1SvImJ_T0075977.1 MGP_129S1SvImJ_G0030395.1 mouse_genomes_project 5 154070182 154131802 - MGP_129S1SvImJ_P0075977 Slc7a1 protein_coding protein_coding MGP_129S1SvImJ_T0075978.1 MGP_129S1SvImJ_G0030395.1 mouse_genomes_project 5 154083412 154103890 - MGP_129S1SvImJ_P0075978 Slc7a1 protein_coding protein_coding MGP_129S1SvImJ_T0075979.1 MGP_129S1SvImJ_G0030395.1 mouse_genomes_project 5 154123426 154125659 - Slc7a1 protein_coding retained_intron MGP_129S1SvImJ_T0074139.1 MGP_129S1SvImJ_G0030053.1 mouse_genomes_project 5 126085199 126137231 - MGP_129S1SvImJ_P0074139 Atp2a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074140.1 MGP_129S1SvImJ_G0030053.1 mouse_genomes_project 5 126085199 126136742 - MGP_129S1SvImJ_P0074140 Atp2a2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0074141.1 MGP_129S1SvImJ_G0030053.1 mouse_genomes_project 5 126085200 126136952 - MGP_129S1SvImJ_P0074141 Atp2a2 protein_coding protein_coding MGP_129S1SvImJ_T0074142.1 MGP_129S1SvImJ_G0030053.1 mouse_genomes_project 5 126088026 126137282 - MGP_129S1SvImJ_P0074142 Atp2a2 protein_coding protein_coding MGP_129S1SvImJ_T0074143.1 MGP_129S1SvImJ_G0030053.1 mouse_genomes_project 5 126123954 126136678 - Atp2a2 protein_coding processed_transcript MGP_129S1SvImJ_T0074144.1 MGP_129S1SvImJ_G0030053.1 mouse_genomes_project 5 126124007 126136674 - Atp2a2 protein_coding retained_intron MGP_129S1SvImJ_T0010723.1 MGP_129S1SvImJ_G0008839.1 mouse_genomes_project 5 115975106 115975159 - Mir7229 miRNA miRNA MGP_129S1SvImJ_T0001820.1 MGP_129S1SvImJ_G0001735.1 mouse_genomes_project 5 124404206 124406511 - TEC TEC MGP_129S1SvImJ_T0004872.1 MGP_129S1SvImJ_G0004195.1 mouse_genomes_project 5 139110948 139114604 + Gm10369 antisense antisense MGP_129S1SvImJ_T0014954.1 MGP_129S1SvImJ_G0013043.1 mouse_genomes_project 5 30635736 30636131 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001799.1 MGP_129S1SvImJ_G0001714.1 mouse_genomes_project 5 118791759 118794051 + TEC TEC MGP_129S1SvImJ_T0004775.1 MGP_129S1SvImJ_G0004126.1 mouse_genomes_project 5 104069529 104078598 - 1700013M08Rik antisense antisense MGP_129S1SvImJ_T0004776.1 MGP_129S1SvImJ_G0004126.1 mouse_genomes_project 5 104074509 104075307 - 1700013M08Rik antisense antisense MGP_129S1SvImJ_T0001819.1 MGP_129S1SvImJ_G0001734.1 mouse_genomes_project 5 124152915 124154188 + TEC TEC MGP_129S1SvImJ_T0070310.1 MGP_129S1SvImJ_G0029318.1 mouse_genomes_project 5 19035659 19213699 - MGP_129S1SvImJ_P0070310 Fbxl13 protein_coding protein_coding MGP_129S1SvImJ_T0070311.1 MGP_129S1SvImJ_G0029318.1 mouse_genomes_project 5 19042012 19213681 - Fbxl13 protein_coding retained_intron MGP_129S1SvImJ_T0070312.1 MGP_129S1SvImJ_G0029318.1 mouse_genomes_project 5 19072290 19213651 - MGP_129S1SvImJ_P0070312 Fbxl13 protein_coding protein_coding MGP_129S1SvImJ_T0070315.1 MGP_129S1SvImJ_G0029318.1 mouse_genomes_project 5 19211646 19213728 - Fbxl13 protein_coding retained_intron MGP_129S1SvImJ_T0011619.1 MGP_129S1SvImJ_G0009735.1 mouse_genomes_project 5 101909110 101909179 + Gm27997 misc_RNA misc_RNA MGP_129S1SvImJ_T0015221.1 MGP_129S1SvImJ_G0013310.1 mouse_genomes_project 5 150697532 150698031 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001861.1 MGP_129S1SvImJ_G0001775.1 mouse_genomes_project 5 133666313 133668529 + TEC TEC MGP_129S1SvImJ_T0001582.1 MGP_129S1SvImJ_G0001500.1 mouse_genomes_project 5 47635329 47637331 - TEC TEC MGP_129S1SvImJ_T0075687.1 MGP_129S1SvImJ_G0030333.1 mouse_genomes_project 5 148836018 148862378 - MGP_129S1SvImJ_P0075687 Rac1 protein_coding protein_coding MGP_129S1SvImJ_T0075688.1 MGP_129S1SvImJ_G0030333.1 mouse_genomes_project 5 148837858 148862335 - MGP_129S1SvImJ_P0075688 Rac1 protein_coding protein_coding MGP_129S1SvImJ_T0075689.1 MGP_129S1SvImJ_G0030333.1 mouse_genomes_project 5 148840737 148852363 - Rac1 protein_coding processed_transcript MGP_129S1SvImJ_T0075690.1 MGP_129S1SvImJ_G0030333.1 mouse_genomes_project 5 148848357 148851789 - Rac1 protein_coding processed_transcript MGP_129S1SvImJ_T0008251.1 MGP_129S1SvImJ_G0006726.1 mouse_genomes_project 5 104982208 104984601 - 5430427N15Rik lincRNA lincRNA MGP_129S1SvImJ_T0074145.1 MGP_129S1SvImJ_G0030054.1 mouse_genomes_project 5 126186332 126255431 - MGP_129S1SvImJ_P0074145 Ift81 protein_coding protein_coding MGP_129S1SvImJ_T0074146.1 MGP_129S1SvImJ_G0030054.1 mouse_genomes_project 5 126186336 126196692 - Ift81 protein_coding retained_intron MGP_129S1SvImJ_T0074147.1 MGP_129S1SvImJ_G0030054.1 mouse_genomes_project 5 126204497 126209626 - Ift81 protein_coding processed_transcript MGP_129S1SvImJ_T0074148.1 MGP_129S1SvImJ_G0030054.1 mouse_genomes_project 5 126228889 126243359 - MGP_129S1SvImJ_P0074148 Ift81 protein_coding protein_coding MGP_129S1SvImJ_T0074149.1 MGP_129S1SvImJ_G0030054.1 mouse_genomes_project 5 126242043 126255419 - Ift81 protein_coding retained_intron MGP_129S1SvImJ_T0074150.1 MGP_129S1SvImJ_G0030054.1 mouse_genomes_project 5 126242174 126255358 - MGP_129S1SvImJ_P0074150 Ift81 protein_coding protein_coding MGP_129S1SvImJ_T0074151.1 MGP_129S1SvImJ_G0030054.1 mouse_genomes_project 5 126242209 126255414 - MGP_129S1SvImJ_P0074151 Ift81 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074152.1 MGP_129S1SvImJ_G0030054.1 mouse_genomes_project 5 126245850 126248296 - Ift81 protein_coding retained_intron MGP_129S1SvImJ_T0074153.1 MGP_129S1SvImJ_G0030054.1 mouse_genomes_project 5 126247959 126255429 - MGP_129S1SvImJ_P0074153 Ift81 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0004684.1 MGP_129S1SvImJ_G0004060.1 mouse_genomes_project 5 32929961 32957606 - Gm42560 antisense antisense MGP_129S1SvImJ_T0071990.1 MGP_129S1SvImJ_G0029600.1 mouse_genomes_project 5 67820697 67958021 + MGP_129S1SvImJ_P0071990 Grxcr1 protein_coding protein_coding MGP_129S1SvImJ_T0004751.1 MGP_129S1SvImJ_G0004114.1 mouse_genomes_project 5 93467774 93481924 + Gm43599 antisense antisense MGP_129S1SvImJ_T0008272.1 MGP_129S1SvImJ_G0006741.1 mouse_genomes_project 5 109743711 109748996 - 4930428O21Rik lincRNA lincRNA MGP_129S1SvImJ_T0011621.1 MGP_129S1SvImJ_G0009737.1 mouse_genomes_project 5 101911703 101911882 + Gm27286 misc_RNA misc_RNA MGP_129S1SvImJ_T0018170.1 MGP_129S1SvImJ_G0015596.1 mouse_genomes_project 5 42712176 42734641 - Gm42716 processed_transcript sense_intronic MGP_129S1SvImJ_T0018171.1 MGP_129S1SvImJ_G0015596.1 mouse_genomes_project 5 42728330 42734585 - Gm42716 processed_transcript sense_intronic MGP_129S1SvImJ_T0018172.1 MGP_129S1SvImJ_G0015596.1 mouse_genomes_project 5 42734136 42735906 - Gm42716 processed_transcript retained_intron MGP_129S1SvImJ_T0010695.1 MGP_129S1SvImJ_G0008811.1 mouse_genomes_project 5 34625819 34625878 + Mir7689 miRNA miRNA MGP_129S1SvImJ_T0008443.1 MGP_129S1SvImJ_G0006851.1 mouse_genomes_project 5 149119858 149128646 + D130017N08Rik lincRNA lincRNA MGP_129S1SvImJ_T0008444.1 MGP_129S1SvImJ_G0006851.1 mouse_genomes_project 5 149121366 149129985 + D130017N08Rik lincRNA lincRNA MGP_129S1SvImJ_T0008446.1 MGP_129S1SvImJ_G0006851.1 mouse_genomes_project 5 149129146 149131428 + D130017N08Rik lincRNA lincRNA MGP_129S1SvImJ_T0014970.1 MGP_129S1SvImJ_G0013059.1 mouse_genomes_project 5 35763705 35764185 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001872.1 MGP_129S1SvImJ_G0001786.1 mouse_genomes_project 5 135850570 135851867 - TEC TEC MGP_129S1SvImJ_T0101215.1 MGP_129S1SvImJ_G0039282.1 mouse_genomes_project 5 113168844 113168977 - Gm26079 snoRNA snoRNA MGP_129S1SvImJ_T0008109.1 MGP_129S1SvImJ_G0006614.1 mouse_genomes_project 5 35527412 35540281 + lincRNA lincRNA MGP_129S1SvImJ_T0008110.1 MGP_129S1SvImJ_G0006614.1 mouse_genomes_project 5 35531852 35538976 + lincRNA lincRNA MGP_129S1SvImJ_T0015010.1 MGP_129S1SvImJ_G0013099.1 mouse_genomes_project 5 58891605 58891984 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075472.1 MGP_129S1SvImJ_G0030284.1 mouse_genomes_project 5 144383228 144393594 + MGP_129S1SvImJ_P0075472 C130050O18Rik protein_coding protein_coding MGP_129S1SvImJ_T0075473.1 MGP_129S1SvImJ_G0030284.1 mouse_genomes_project 5 144384335 144393591 + MGP_129S1SvImJ_P0075473 C130050O18Rik protein_coding protein_coding MGP_129S1SvImJ_T0075474.1 MGP_129S1SvImJ_G0030284.1 mouse_genomes_project 5 144384413 144393596 + MGP_129S1SvImJ_P0075474 C130050O18Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071666.1 MGP_129S1SvImJ_G0029549.1 mouse_genomes_project 5 51772546 51826463 + Zcchc4 protein_coding processed_transcript MGP_129S1SvImJ_T0071667.1 MGP_129S1SvImJ_G0029549.1 mouse_genomes_project 5 51781244 51826206 + MGP_129S1SvImJ_P0071667 Zcchc4 protein_coding protein_coding MGP_129S1SvImJ_T0071668.1 MGP_129S1SvImJ_G0029549.1 mouse_genomes_project 5 51781244 51827300 + MGP_129S1SvImJ_P0071668 Zcchc4 protein_coding protein_coding MGP_129S1SvImJ_T0071669.1 MGP_129S1SvImJ_G0029549.1 mouse_genomes_project 5 51781276 51798361 + Zcchc4 protein_coding retained_intron MGP_129S1SvImJ_T0071670.1 MGP_129S1SvImJ_G0029549.1 mouse_genomes_project 5 51781306 51794292 + MGP_129S1SvImJ_P0071670 Zcchc4 protein_coding protein_coding MGP_129S1SvImJ_T0071671.1 MGP_129S1SvImJ_G0029549.1 mouse_genomes_project 5 51781312 51794324 + Zcchc4 protein_coding processed_transcript MGP_129S1SvImJ_T0071672.1 MGP_129S1SvImJ_G0029549.1 mouse_genomes_project 5 51796222 51821819 + Zcchc4 protein_coding processed_transcript MGP_129S1SvImJ_T0071673.1 MGP_129S1SvImJ_G0029549.1 mouse_genomes_project 5 51802492 51818517 + Zcchc4 protein_coding retained_intron MGP_129S1SvImJ_T0008247.1 MGP_129S1SvImJ_G0006723.1 mouse_genomes_project 5 103662740 103664304 + Gm29707 lincRNA lincRNA MGP_129S1SvImJ_T0008248.1 MGP_129S1SvImJ_G0006723.1 mouse_genomes_project 5 103663371 103663862 + Gm29707 lincRNA lincRNA MGP_129S1SvImJ_T0101209.1 MGP_129S1SvImJ_G0039276.1 mouse_genomes_project 5 101509269 101509352 - Gm26363 snoRNA snoRNA MGP_129S1SvImJ_T0015051.1 MGP_129S1SvImJ_G0013140.1 mouse_genomes_project 5 75372379 75372707 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070535.1 MGP_129S1SvImJ_G0029361.1 mouse_genomes_project 5 23050253 23236406 - MGP_129S1SvImJ_P0070535 Kmt2c protein_coding unknown_likely_coding MGP_129S1SvImJ_T0070536.1 MGP_129S1SvImJ_G0029361.1 mouse_genomes_project 5 23050262 23084389 - MGP_129S1SvImJ_P0070536 Kmt2c protein_coding protein_coding MGP_129S1SvImJ_T0070537.1 MGP_129S1SvImJ_G0029361.1 mouse_genomes_project 5 23050890 23094790 - MGP_129S1SvImJ_P0070537 Kmt2c protein_coding protein_coding MGP_129S1SvImJ_T0070538.1 MGP_129S1SvImJ_G0029361.1 mouse_genomes_project 5 23052074 23294287 - MGP_129S1SvImJ_P0070538 Kmt2c protein_coding protein_coding MGP_129S1SvImJ_T0070539.1 MGP_129S1SvImJ_G0029361.1 mouse_genomes_project 5 23054116 23060442 - Kmt2c protein_coding retained_intron MGP_129S1SvImJ_T0070540.1 MGP_129S1SvImJ_G0029361.1 mouse_genomes_project 5 23068161 23077693 - Kmt2c protein_coding retained_intron MGP_129S1SvImJ_T0070541.1 MGP_129S1SvImJ_G0029361.1 mouse_genomes_project 5 23103772 23294244 - MGP_129S1SvImJ_P0070541 Kmt2c protein_coding protein_coding MGP_129S1SvImJ_T0070542.1 MGP_129S1SvImJ_G0029361.1 mouse_genomes_project 5 23160630 23294297 - MGP_129S1SvImJ_P0070542 Kmt2c protein_coding protein_coding MGP_129S1SvImJ_T0070543.1 MGP_129S1SvImJ_G0029361.1 mouse_genomes_project 5 23170425 23294325 - Kmt2c protein_coding retained_intron MGP_129S1SvImJ_T0072885.1 MGP_129S1SvImJ_G0029798.1 mouse_genomes_project 5 104076699 104515092 + MGP_129S1SvImJ_P0072885 Arhgap24 protein_coding protein_coding MGP_129S1SvImJ_T0072886.1 MGP_129S1SvImJ_G0029798.1 mouse_genomes_project 5 104076699 104515091 + MGP_129S1SvImJ_P0072886 Arhgap24 protein_coding protein_coding MGP_129S1SvImJ_T0072887.1 MGP_129S1SvImJ_G0029798.1 mouse_genomes_project 5 104076838 104273060 + Arhgap24 protein_coding retained_intron MGP_129S1SvImJ_T0072888.1 MGP_129S1SvImJ_G0029798.1 mouse_genomes_project 5 104269306 104515092 + MGP_129S1SvImJ_P0072888 Arhgap24 protein_coding protein_coding MGP_129S1SvImJ_T0072889.1 MGP_129S1SvImJ_G0029798.1 mouse_genomes_project 5 104329853 104515092 + MGP_129S1SvImJ_P0072889 Arhgap24 protein_coding protein_coding MGP_129S1SvImJ_T0072890.1 MGP_129S1SvImJ_G0029798.1 mouse_genomes_project 5 104379832 104515093 + MGP_129S1SvImJ_P0072890 Arhgap24 protein_coding protein_coding MGP_129S1SvImJ_T0072891.1 MGP_129S1SvImJ_G0029798.1 mouse_genomes_project 5 104424909 104492635 + Arhgap24 protein_coding processed_transcript MGP_129S1SvImJ_T0072892.1 MGP_129S1SvImJ_G0029798.1 mouse_genomes_project 5 104461930 104515092 + MGP_129S1SvImJ_P0072892 Arhgap24 protein_coding protein_coding MGP_129S1SvImJ_T0099957.1 MGP_129S1SvImJ_G0038024.1 mouse_genomes_project 5 115673393 115673502 + Gm22740 snRNA snRNA MGP_129S1SvImJ_T0098601.1 MGP_129S1SvImJ_G0036686.1 mouse_genomes_project 5 52382294 52382408 - n-R5s172 rRNA rRNA MGP_129S1SvImJ_T0008427.1 MGP_129S1SvImJ_G0006836.1 mouse_genomes_project 5 142004563 142020284 - Gm42456 lincRNA lincRNA MGP_129S1SvImJ_T0073407.1 MGP_129S1SvImJ_G0029913.1 mouse_genomes_project 5 115706484 115711750 - MGP_129S1SvImJ_P0073407 Crybb3 protein_coding protein_coding MGP_129S1SvImJ_T0073408.1 MGP_129S1SvImJ_G0029913.1 mouse_genomes_project 5 115706484 115711307 - MGP_129S1SvImJ_P0073408 Crybb3 protein_coding protein_coding MGP_129S1SvImJ_T0073409.1 MGP_129S1SvImJ_G0029913.1 mouse_genomes_project 5 115706484 115712224 - MGP_129S1SvImJ_P0073409 Crybb3 protein_coding protein_coding MGP_129S1SvImJ_T0073410.1 MGP_129S1SvImJ_G0029913.1 mouse_genomes_project 5 115706488 115711750 - MGP_129S1SvImJ_P0073410 Crybb3 protein_coding protein_coding MGP_129S1SvImJ_T0073411.1 MGP_129S1SvImJ_G0029913.1 mouse_genomes_project 5 115706492 115712223 - MGP_129S1SvImJ_P0073411 Crybb3 protein_coding protein_coding MGP_129S1SvImJ_T0073412.1 MGP_129S1SvImJ_G0029913.1 mouse_genomes_project 5 115707669 115711031 - Crybb3 protein_coding retained_intron MGP_129S1SvImJ_T0073413.1 MGP_129S1SvImJ_G0029913.1 mouse_genomes_project 5 115707934 115711306 - Crybb3 protein_coding retained_intron MGP_129S1SvImJ_T0073414.1 MGP_129S1SvImJ_G0029913.1 mouse_genomes_project 5 115709030 115711293 - MGP_129S1SvImJ_P0073414 Crybb3 protein_coding protein_coding MGP_129S1SvImJ_T0073415.1 MGP_129S1SvImJ_G0029913.1 mouse_genomes_project 5 115709113 115712219 - MGP_129S1SvImJ_P0073415 Crybb3 protein_coding protein_coding MGP_129S1SvImJ_T0073416.1 MGP_129S1SvImJ_G0029913.1 mouse_genomes_project 5 115709179 115712220 - Crybb3 protein_coding processed_transcript MGP_129S1SvImJ_T0073417.1 MGP_129S1SvImJ_G0029913.1 mouse_genomes_project 5 115710396 115711699 - MGP_129S1SvImJ_P0073417 Crybb3 protein_coding protein_coding MGP_129S1SvImJ_T0010679.1 MGP_129S1SvImJ_G0008795.1 mouse_genomes_project 5 470072 470189 + Gm26238 miRNA miRNA MGP_129S1SvImJ_T0074829.1 MGP_129S1SvImJ_G0030161.1 mouse_genomes_project 5 139048758 139069418 - MGP_129S1SvImJ_P0074829 Eif4h protein_coding protein_coding MGP_129S1SvImJ_T0074830.1 MGP_129S1SvImJ_G0030161.1 mouse_genomes_project 5 139048914 139069275 - MGP_129S1SvImJ_P0074830 Eif4h protein_coding protein_coding MGP_129S1SvImJ_T0074831.1 MGP_129S1SvImJ_G0030161.1 mouse_genomes_project 5 139052930 139069253 - Eif4h protein_coding retained_intron MGP_129S1SvImJ_T0074832.1 MGP_129S1SvImJ_G0030161.1 mouse_genomes_project 5 139053933 139069230 - Eif4h protein_coding retained_intron MGP_129S1SvImJ_T0074833.1 MGP_129S1SvImJ_G0030161.1 mouse_genomes_project 5 139067389 139069238 - Eif4h protein_coding retained_intron MGP_129S1SvImJ_T0075119.1 MGP_129S1SvImJ_G0030216.1 mouse_genomes_project 5 141781072 141799601 - MGP_129S1SvImJ_P0075119 Serpine1 protein_coding protein_coding MGP_129S1SvImJ_T0075120.1 MGP_129S1SvImJ_G0030216.1 mouse_genomes_project 5 141781080 141799596 - MGP_129S1SvImJ_P0075120 Serpine1 protein_coding protein_coding MGP_129S1SvImJ_T0075121.1 MGP_129S1SvImJ_G0030216.1 mouse_genomes_project 5 141795531 141799610 - Serpine1 protein_coding retained_intron MGP_129S1SvImJ_T0073926.1 MGP_129S1SvImJ_G0030014.1 mouse_genomes_project 5 124159976 124185661 - MGP_129S1SvImJ_P0073926 Oas3 protein_coding protein_coding MGP_129S1SvImJ_T0073927.1 MGP_129S1SvImJ_G0030014.1 mouse_genomes_project 5 124161094 124163137 - MGP_129S1SvImJ_P0073927 Oas3 protein_coding protein_coding MGP_129S1SvImJ_T0073928.1 MGP_129S1SvImJ_G0030014.1 mouse_genomes_project 5 124162277 124164533 - Oas3 protein_coding retained_intron MGP_129S1SvImJ_T0073929.1 MGP_129S1SvImJ_G0030014.1 mouse_genomes_project 5 124170516 124185640 - Oas3 protein_coding retained_intron MGP_129S1SvImJ_T0072972.1 MGP_129S1SvImJ_G0029824.1 mouse_genomes_project 5 107210744 107248089 - MGP_129S1SvImJ_P0072972 protein_coding protein_coding MGP_129S1SvImJ_T0008125.1 MGP_129S1SvImJ_G0006623.1 mouse_genomes_project 5 38458448 38469377 - Gm35191 lincRNA lincRNA MGP_129S1SvImJ_T0069960.1 MGP_129S1SvImJ_G0029257.1 mouse_genomes_project 5 384650 397400 + MGP_129S1SvImJ_P0069960 1700109H08Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0069961.1 MGP_129S1SvImJ_G0029257.1 mouse_genomes_project 5 384757 397415 + MGP_129S1SvImJ_P0069961 1700109H08Rik protein_coding protein_coding MGP_129S1SvImJ_T0069962.1 MGP_129S1SvImJ_G0029257.1 mouse_genomes_project 5 388764 397415 + MGP_129S1SvImJ_P0069962 1700109H08Rik protein_coding protein_coding MGP_129S1SvImJ_T0069963.1 MGP_129S1SvImJ_G0029257.1 mouse_genomes_project 5 391299 393516 + 1700109H08Rik protein_coding retained_intron MGP_129S1SvImJ_T0069964.1 MGP_129S1SvImJ_G0029257.1 mouse_genomes_project 5 393564 397403 + MGP_129S1SvImJ_P0069964 1700109H08Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0004916.1 MGP_129S1SvImJ_G0004226.1 mouse_genomes_project 5 155973375 155990723 - Gm42557 antisense antisense MGP_129S1SvImJ_T0098975.1 MGP_129S1SvImJ_G0037051.1 mouse_genomes_project 5 149697265 149700389 + Dmrt1i sense_intronic sense_intronic MGP_129S1SvImJ_T0098976.1 MGP_129S1SvImJ_G0037051.1 mouse_genomes_project 5 149697867 149700346 + Dmrt1i sense_intronic sense_intronic MGP_129S1SvImJ_T0098977.1 MGP_129S1SvImJ_G0037051.1 mouse_genomes_project 5 149697867 149700346 + Dmrt1i sense_intronic sense_intronic MGP_129S1SvImJ_T0073733.1 MGP_129S1SvImJ_G0029976.1 mouse_genomes_project 5 118556230 118643034 - MGP_129S1SvImJ_P0073733 Ccdc64 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0073734.1 MGP_129S1SvImJ_G0029976.1 mouse_genomes_project 5 118556237 118557857 - Ccdc64 protein_coding retained_intron MGP_129S1SvImJ_T0073735.1 MGP_129S1SvImJ_G0029976.1 mouse_genomes_project 5 118556237 118643165 - MGP_129S1SvImJ_P0073735 Ccdc64 protein_coding protein_coding MGP_129S1SvImJ_T0073736.1 MGP_129S1SvImJ_G0029976.1 mouse_genomes_project 5 118556239 118561049 - MGP_129S1SvImJ_P0073736 Ccdc64 protein_coding protein_coding MGP_129S1SvImJ_T0073737.1 MGP_129S1SvImJ_G0029976.1 mouse_genomes_project 5 118556242 118561044 - MGP_129S1SvImJ_P0073737 Ccdc64 protein_coding protein_coding MGP_129S1SvImJ_T0073738.1 MGP_129S1SvImJ_G0029976.1 mouse_genomes_project 5 118557329 118561049 - MGP_129S1SvImJ_P0073738 Ccdc64 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073739.1 MGP_129S1SvImJ_G0029976.1 mouse_genomes_project 5 118559881 118579699 - MGP_129S1SvImJ_P0073739 Ccdc64 protein_coding protein_coding MGP_129S1SvImJ_T0073740.1 MGP_129S1SvImJ_G0029976.1 mouse_genomes_project 5 118569829 118579965 - Ccdc64 protein_coding retained_intron MGP_129S1SvImJ_T0073741.1 MGP_129S1SvImJ_G0029976.1 mouse_genomes_project 5 118576690 118628103 - Ccdc64 protein_coding processed_transcript MGP_129S1SvImJ_T0073742.1 MGP_129S1SvImJ_G0029976.1 mouse_genomes_project 5 118579619 118642911 - MGP_129S1SvImJ_P0073742 Ccdc64 protein_coding protein_coding MGP_129S1SvImJ_T0073743.1 MGP_129S1SvImJ_G0029976.1 mouse_genomes_project 5 118636007 118642972 - Ccdc64 protein_coding retained_intron MGP_129S1SvImJ_T0099980.1 MGP_129S1SvImJ_G0038047.1 mouse_genomes_project 5 156655514 156655620 + Gm24630 snRNA snRNA MGP_129S1SvImJ_T0070322.1 MGP_129S1SvImJ_G0029322.1 mouse_genomes_project 5 19310185 19336330 + MGP_129S1SvImJ_P0070322 Pmpcb protein_coding protein_coding MGP_129S1SvImJ_T0070323.1 MGP_129S1SvImJ_G0029322.1 mouse_genomes_project 5 19314211 19336325 + Pmpcb protein_coding retained_intron MGP_129S1SvImJ_T0070324.1 MGP_129S1SvImJ_G0029322.1 mouse_genomes_project 5 19315951 19318144 + Pmpcb protein_coding retained_intron MGP_129S1SvImJ_T0070325.1 MGP_129S1SvImJ_G0029322.1 mouse_genomes_project 5 19319814 19320614 + Pmpcb protein_coding retained_intron MGP_129S1SvImJ_T0070326.1 MGP_129S1SvImJ_G0029322.1 mouse_genomes_project 5 19335691 19336319 + Pmpcb protein_coding retained_intron MGP_129S1SvImJ_T0070327.1 MGP_129S1SvImJ_G0029322.1 mouse_genomes_project 5 19335817 19336325 + MGP_129S1SvImJ_P0070327 Pmpcb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070328.1 MGP_129S1SvImJ_G0029322.1 mouse_genomes_project 5 19335953 19336319 + Pmpcb protein_coding retained_intron MGP_129S1SvImJ_T0004806.1 MGP_129S1SvImJ_G0004150.1 mouse_genomes_project 5 117781001 117783579 + Hnf1aos2 antisense antisense MGP_129S1SvImJ_T0001817.1 MGP_129S1SvImJ_G0001732.1 mouse_genomes_project 5 123579613 123580760 + TEC TEC MGP_129S1SvImJ_T0014971.1 MGP_129S1SvImJ_G0013060.1 mouse_genomes_project 5 36923726 36923930 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011607.1 MGP_129S1SvImJ_G0009723.1 mouse_genomes_project 5 5989904 5990046 - Gm27941 misc_RNA misc_RNA MGP_129S1SvImJ_T0015165.1 MGP_129S1SvImJ_G0013254.1 mouse_genomes_project 5 120433255 120433692 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014957.1 MGP_129S1SvImJ_G0013046.1 mouse_genomes_project 5 31233042 31237659 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001719.1 MGP_129S1SvImJ_G0001634.1 mouse_genomes_project 5 75130140 75132986 - TEC TEC MGP_129S1SvImJ_T0070404.1 MGP_129S1SvImJ_G0029335.1 mouse_genomes_project 5 21816654 21881408 + MGP_129S1SvImJ_P0070404 Klhl7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070405.1 MGP_129S1SvImJ_G0029335.1 mouse_genomes_project 5 21816696 21857313 + Klhl7 protein_coding retained_intron MGP_129S1SvImJ_T0070406.1 MGP_129S1SvImJ_G0029335.1 mouse_genomes_project 5 21816803 21883986 + MGP_129S1SvImJ_P0070406 Klhl7 protein_coding protein_coding MGP_129S1SvImJ_T0072942.1 MGP_129S1SvImJ_G0029809.1 mouse_genomes_project 5 105747474 105787125 - MGP_129S1SvImJ_P0072942 Sparcl1 protein_coding protein_coding MGP_129S1SvImJ_T0072943.1 MGP_129S1SvImJ_G0029809.1 mouse_genomes_project 5 105762918 105786831 - MGP_129S1SvImJ_P0072943 Sparcl1 protein_coding protein_coding MGP_129S1SvImJ_T0001726.1 MGP_129S1SvImJ_G0001641.1 mouse_genomes_project 5 82132722 82133669 + TEC TEC MGP_129S1SvImJ_T0001710.1 MGP_129S1SvImJ_G0001625.1 mouse_genomes_project 5 73661152 73661731 - TEC TEC MGP_129S1SvImJ_T0070411.1 MGP_129S1SvImJ_G0029337.1 mouse_genomes_project 5 22040633 22074225 - MGP_129S1SvImJ_P0070411 Kcnh2 protein_coding protein_coding MGP_129S1SvImJ_T0070412.1 MGP_129S1SvImJ_G0029337.1 mouse_genomes_project 5 22040633 22052190 - MGP_129S1SvImJ_P0070412 Kcnh2 protein_coding protein_coding MGP_129S1SvImJ_T0070413.1 MGP_129S1SvImJ_G0029337.1 mouse_genomes_project 5 22041127 22043301 - Kcnh2 protein_coding processed_transcript MGP_129S1SvImJ_T0070414.1 MGP_129S1SvImJ_G0029337.1 mouse_genomes_project 5 22045550 22046850 - Kcnh2 protein_coding processed_transcript MGP_129S1SvImJ_T0070415.1 MGP_129S1SvImJ_G0029337.1 mouse_genomes_project 5 22046508 22047580 - Kcnh2 protein_coding processed_transcript MGP_129S1SvImJ_T0072695.1 MGP_129S1SvImJ_G0029758.1 mouse_genomes_project 5 94312793 94395978 + MGP_129S1SvImJ_P0072695 Sept11 protein_coding protein_coding MGP_129S1SvImJ_T0072696.1 MGP_129S1SvImJ_G0029758.1 mouse_genomes_project 5 94312794 94313434 + Sept11 protein_coding retained_intron MGP_129S1SvImJ_T0072697.1 MGP_129S1SvImJ_G0029758.1 mouse_genomes_project 5 94312794 94390989 + MGP_129S1SvImJ_P0072697 Sept11 protein_coding protein_coding MGP_129S1SvImJ_T0072698.1 MGP_129S1SvImJ_G0029758.1 mouse_genomes_project 5 94312804 94382277 + MGP_129S1SvImJ_P0072698 Sept11 protein_coding protein_coding MGP_129S1SvImJ_T0072699.1 MGP_129S1SvImJ_G0029758.1 mouse_genomes_project 5 94312807 94397458 + MGP_129S1SvImJ_P0072699 Sept11 protein_coding protein_coding MGP_129S1SvImJ_T0072700.1 MGP_129S1SvImJ_G0029758.1 mouse_genomes_project 5 94312882 94397468 + MGP_129S1SvImJ_P0072700 Sept11 protein_coding protein_coding MGP_129S1SvImJ_T0072701.1 MGP_129S1SvImJ_G0029758.1 mouse_genomes_project 5 94312892 94369499 + MGP_129S1SvImJ_P0072701 Sept11 protein_coding protein_coding MGP_129S1SvImJ_T0072702.1 MGP_129S1SvImJ_G0029758.1 mouse_genomes_project 5 94312927 94397097 + MGP_129S1SvImJ_P0072702 Sept11 protein_coding protein_coding MGP_129S1SvImJ_T0072703.1 MGP_129S1SvImJ_G0029758.1 mouse_genomes_project 5 94369458 94378708 + Sept11 protein_coding retained_intron MGP_129S1SvImJ_T0004818.1 MGP_129S1SvImJ_G0004158.1 mouse_genomes_project 5 120390770 120391519 - Gm10399 antisense antisense MGP_129S1SvImJ_T0004819.1 MGP_129S1SvImJ_G0004158.1 mouse_genomes_project 5 120391018 120391517 - Gm10399 antisense antisense MGP_129S1SvImJ_T0001794.1 MGP_129S1SvImJ_G0001709.1 mouse_genomes_project 5 117624571 117631492 - TEC TEC MGP_129S1SvImJ_T0071741.1 MGP_129S1SvImJ_G0029561.1 mouse_genomes_project 5 62354010 62434652 + MGP_129S1SvImJ_P0071741 Dthd1 protein_coding protein_coding MGP_129S1SvImJ_T0071810.1 MGP_129S1SvImJ_G0029576.1 mouse_genomes_project 5 65022944 65026029 - MGP_129S1SvImJ_P0071810 Rpl9 protein_coding protein_coding MGP_129S1SvImJ_T0071811.1 MGP_129S1SvImJ_G0029576.1 mouse_genomes_project 5 65022951 65023502 - Rpl9 protein_coding retained_intron MGP_129S1SvImJ_T0071812.1 MGP_129S1SvImJ_G0029576.1 mouse_genomes_project 5 65022951 65025593 - MGP_129S1SvImJ_P0071812 Rpl9 protein_coding protein_coding MGP_129S1SvImJ_T0071813.1 MGP_129S1SvImJ_G0029576.1 mouse_genomes_project 5 65022951 65025421 - MGP_129S1SvImJ_P0071813 Rpl9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071814.1 MGP_129S1SvImJ_G0029576.1 mouse_genomes_project 5 65022951 65025987 - MGP_129S1SvImJ_P0071814 Rpl9 protein_coding protein_coding MGP_129S1SvImJ_T0071815.1 MGP_129S1SvImJ_G0029576.1 mouse_genomes_project 5 65022952 65025986 - Rpl9 protein_coding retained_intron MGP_129S1SvImJ_T0071816.1 MGP_129S1SvImJ_G0029576.1 mouse_genomes_project 5 65022994 65023961 - Rpl9 protein_coding retained_intron MGP_129S1SvImJ_T0071817.1 MGP_129S1SvImJ_G0029576.1 mouse_genomes_project 5 65023264 65025969 - Rpl9 protein_coding retained_intron MGP_129S1SvImJ_T0071818.1 MGP_129S1SvImJ_G0029576.1 mouse_genomes_project 5 65023504 65025579 - Rpl9 protein_coding retained_intron MGP_129S1SvImJ_T0076067.1 MGP_129S1SvImJ_G0030409.1 mouse_genomes_project 5 156446043 156458492 - MGP_129S1SvImJ_P0076067 Zar1l protein_coding protein_coding MGP_129S1SvImJ_T0071901.1 MGP_129S1SvImJ_G0029588.1 mouse_genomes_project 5 65986621 66025665 + MGP_129S1SvImJ_P0071901 Nsun7 protein_coding protein_coding MGP_129S1SvImJ_T0071902.1 MGP_129S1SvImJ_G0029588.1 mouse_genomes_project 5 65986636 66026629 + MGP_129S1SvImJ_P0071902 Nsun7 protein_coding protein_coding MGP_129S1SvImJ_T0071903.1 MGP_129S1SvImJ_G0029588.1 mouse_genomes_project 5 65986742 65992550 + Nsun7 protein_coding retained_intron MGP_129S1SvImJ_T0071904.1 MGP_129S1SvImJ_G0029588.1 mouse_genomes_project 5 65987036 66026618 + MGP_129S1SvImJ_P0071904 Nsun7 protein_coding protein_coding MGP_129S1SvImJ_T0098613.1 MGP_129S1SvImJ_G0036698.1 mouse_genomes_project 5 154512506 154512624 - n-R5s179 rRNA rRNA MGP_129S1SvImJ_T0070084.1 MGP_129S1SvImJ_G0029275.1 mouse_genomes_project 5 2571978 2602249 - MGP_129S1SvImJ_P0070084 Steap2 protein_coding protein_coding MGP_129S1SvImJ_T0070085.1 MGP_129S1SvImJ_G0029275.1 mouse_genomes_project 5 2571980 2590388 - MGP_129S1SvImJ_P0070085 Steap2 protein_coding protein_coding MGP_129S1SvImJ_T0070086.1 MGP_129S1SvImJ_G0029275.1 mouse_genomes_project 5 2573103 2601731 - MGP_129S1SvImJ_P0070086 Steap2 protein_coding protein_coding MGP_129S1SvImJ_T0070087.1 MGP_129S1SvImJ_G0029275.1 mouse_genomes_project 5 2578271 2601723 - MGP_129S1SvImJ_P0070087 Steap2 protein_coding protein_coding MGP_129S1SvImJ_T0070088.1 MGP_129S1SvImJ_G0029275.1 mouse_genomes_project 5 2578824 2601738 - MGP_129S1SvImJ_P0070088 Steap2 protein_coding protein_coding MGP_129S1SvImJ_T0070089.1 MGP_129S1SvImJ_G0029275.1 mouse_genomes_project 5 2579058 2584620 - Steap2 protein_coding processed_transcript MGP_129S1SvImJ_T0070090.1 MGP_129S1SvImJ_G0029275.1 mouse_genomes_project 5 2579063 2601731 - MGP_129S1SvImJ_P0070090 Steap2 protein_coding protein_coding MGP_129S1SvImJ_T0070091.1 MGP_129S1SvImJ_G0029275.1 mouse_genomes_project 5 2580838 2601997 - MGP_129S1SvImJ_P0070091 Steap2 protein_coding protein_coding MGP_129S1SvImJ_T0070092.1 MGP_129S1SvImJ_G0029275.1 mouse_genomes_project 5 2583429 2602204 - Steap2 protein_coding retained_intron MGP_129S1SvImJ_T0015210.1 MGP_129S1SvImJ_G0013299.1 mouse_genomes_project 5 147494535 147495499 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008497.1 MGP_129S1SvImJ_G0006890.1 mouse_genomes_project 5 157653873 157661236 + lincRNA lincRNA MGP_129S1SvImJ_T0014899.1 MGP_129S1SvImJ_G0012988.1 mouse_genomes_project 5 18651413 18651787 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001798.1 MGP_129S1SvImJ_G0001713.1 mouse_genomes_project 5 118304825 118307071 - TEC TEC MGP_129S1SvImJ_T0015226.1 MGP_129S1SvImJ_G0013315.1 mouse_genomes_project 5 151438677 151438837 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073274.1 MGP_129S1SvImJ_G0029887.1 mouse_genomes_project 5 112792289 112803532 + Lrcol1 protein_coding retained_intron MGP_129S1SvImJ_T0073275.1 MGP_129S1SvImJ_G0029887.1 mouse_genomes_project 5 112792289 112803532 + MGP_129S1SvImJ_P0073275 Lrcol1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073276.1 MGP_129S1SvImJ_G0029887.1 mouse_genomes_project 5 112792289 112803532 + MGP_129S1SvImJ_P0073276 Lrcol1 protein_coding protein_coding MGP_129S1SvImJ_T0073277.1 MGP_129S1SvImJ_G0029887.1 mouse_genomes_project 5 112801616 112803605 + MGP_129S1SvImJ_P0073277 Lrcol1 protein_coding protein_coding MGP_129S1SvImJ_T0073278.1 MGP_129S1SvImJ_G0029887.1 mouse_genomes_project 5 112801678 112803542 + MGP_129S1SvImJ_P0073278 Lrcol1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0001567.1 MGP_129S1SvImJ_G0001485.1 mouse_genomes_project 5 44473106 44476522 - TEC TEC MGP_129S1SvImJ_T0073366.1 MGP_129S1SvImJ_G0029904.1 mouse_genomes_project 5 114914232 114916854 - Srrd protein_coding processed_transcript MGP_129S1SvImJ_T0073367.1 MGP_129S1SvImJ_G0029904.1 mouse_genomes_project 5 114914232 114919852 - MGP_129S1SvImJ_P0073367 Srrd protein_coding protein_coding MGP_129S1SvImJ_T0073368.1 MGP_129S1SvImJ_G0029904.1 mouse_genomes_project 5 114914232 114919872 - MGP_129S1SvImJ_P0073368 Srrd protein_coding protein_coding MGP_129S1SvImJ_T0073369.1 MGP_129S1SvImJ_G0029904.1 mouse_genomes_project 5 114914749 114916764 - Srrd protein_coding retained_intron MGP_129S1SvImJ_T0073370.1 MGP_129S1SvImJ_G0029904.1 mouse_genomes_project 5 114914812 114919850 - Srrd protein_coding processed_transcript MGP_129S1SvImJ_T0073371.1 MGP_129S1SvImJ_G0029904.1 mouse_genomes_project 5 114916550 114917051 - Srrd protein_coding processed_transcript MGP_129S1SvImJ_T0071401.1 MGP_129S1SvImJ_G0029503.1 mouse_genomes_project 5 36114597 36118934 + MGP_129S1SvImJ_P0071401 Cytl1 protein_coding protein_coding MGP_129S1SvImJ_T0071402.1 MGP_129S1SvImJ_G0029503.1 mouse_genomes_project 5 36116391 36118929 + Cytl1 protein_coding retained_intron MGP_129S1SvImJ_T0001841.1 MGP_129S1SvImJ_G0001756.1 mouse_genomes_project 5 127429868 127431207 - TEC TEC MGP_129S1SvImJ_T0008189.1 MGP_129S1SvImJ_G0006677.1 mouse_genomes_project 5 76221945 76233739 + Gm32780 lincRNA lincRNA MGP_129S1SvImJ_T0008440.1 MGP_129S1SvImJ_G0006848.1 mouse_genomes_project 5 148591629 148594066 + BC030343 lincRNA lincRNA MGP_129S1SvImJ_T0073348.1 MGP_129S1SvImJ_G0029899.1 mouse_genomes_project 5 114255304 114255955 + MGP_129S1SvImJ_P0073348 Gm26897 protein_coding protein_coding MGP_129S1SvImJ_T0098944.1 MGP_129S1SvImJ_G0037022.1 mouse_genomes_project 5 1706120 1707856 - Gm43113 sense_intronic sense_intronic MGP_129S1SvImJ_T0001492.1 MGP_129S1SvImJ_G0001413.1 mouse_genomes_project 5 20441764 20446491 - TEC TEC MGP_129S1SvImJ_T0070249.1 MGP_129S1SvImJ_G0029306.1 mouse_genomes_project 5 15181460 15247514 - MGP_129S1SvImJ_P0070249 Cd36 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0070250.1 MGP_129S1SvImJ_G0029306.1 mouse_genomes_project 5 15181473 15247536 - MGP_129S1SvImJ_P0070250 Cd36 protein_coding protein_coding MGP_129S1SvImJ_T0070251.1 MGP_129S1SvImJ_G0029306.1 mouse_genomes_project 5 15181799 15231591 - MGP_129S1SvImJ_P0070251 Cd36 protein_coding protein_coding MGP_129S1SvImJ_T0070252.1 MGP_129S1SvImJ_G0029306.1 mouse_genomes_project 5 15182150 15287461 - MGP_129S1SvImJ_P0070252 Cd36 protein_coding protein_coding MGP_129S1SvImJ_T0070253.1 MGP_129S1SvImJ_G0029306.1 mouse_genomes_project 5 15182152 15247473 - MGP_129S1SvImJ_P0070253 Cd36 protein_coding protein_coding MGP_129S1SvImJ_T0070254.1 MGP_129S1SvImJ_G0029306.1 mouse_genomes_project 5 15182269 15231612 - MGP_129S1SvImJ_P0070254 Cd36 protein_coding protein_coding MGP_129S1SvImJ_T0070255.1 MGP_129S1SvImJ_G0029306.1 mouse_genomes_project 5 15209054 15287515 - MGP_129S1SvImJ_P0070255 Cd36 protein_coding protein_coding MGP_129S1SvImJ_T0004661.1 MGP_129S1SvImJ_G0004041.1 mouse_genomes_project 5 20820726 20844792 - Gm42948 antisense antisense MGP_129S1SvImJ_T0014999.1 MGP_129S1SvImJ_G0013088.1 mouse_genomes_project 5 54777791 54778497 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008373.1 MGP_129S1SvImJ_G0006803.1 mouse_genomes_project 5 127812703 127858324 + Gm34086 lincRNA lincRNA MGP_129S1SvImJ_T0015188.1 MGP_129S1SvImJ_G0013277.1 mouse_genomes_project 5 140846685 140847460 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014882.1 MGP_129S1SvImJ_G0012971.1 mouse_genomes_project 5 9824298 9825864 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070418.1 MGP_129S1SvImJ_G0029339.1 mouse_genomes_project 5 22107432 22115392 - MGP_129S1SvImJ_P0070418 Atg9b protein_coding protein_coding MGP_129S1SvImJ_T0070419.1 MGP_129S1SvImJ_G0029339.1 mouse_genomes_project 5 22107872 22113885 - Atg9b protein_coding processed_transcript MGP_129S1SvImJ_T0070420.1 MGP_129S1SvImJ_G0029339.1 mouse_genomes_project 5 22110357 22111219 - Atg9b protein_coding processed_transcript MGP_129S1SvImJ_T0072120.1 MGP_129S1SvImJ_G0029625.1 mouse_genomes_project 5 73416091 73468447 + MGP_129S1SvImJ_P0072120 Cwh43 protein_coding protein_coding MGP_129S1SvImJ_T0072121.1 MGP_129S1SvImJ_G0029625.1 mouse_genomes_project 5 73416243 73468457 + MGP_129S1SvImJ_P0072121 Cwh43 protein_coding protein_coding MGP_129S1SvImJ_T0072122.1 MGP_129S1SvImJ_G0029625.1 mouse_genomes_project 5 73416378 73468304 + MGP_129S1SvImJ_P0072122 Cwh43 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0072123.1 MGP_129S1SvImJ_G0029625.1 mouse_genomes_project 5 73445859 73450017 + Cwh43 protein_coding retained_intron MGP_129S1SvImJ_T0015206.1 MGP_129S1SvImJ_G0013295.1 mouse_genomes_project 5 144708147 144708523 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070335.1 MGP_129S1SvImJ_G0029324.1 mouse_genomes_project 5 19364105 19384389 + MGP_129S1SvImJ_P0070335 Psmc2 protein_coding protein_coding MGP_129S1SvImJ_T0070336.1 MGP_129S1SvImJ_G0029324.1 mouse_genomes_project 5 19373732 19378810 + Psmc2 protein_coding retained_intron MGP_129S1SvImJ_T0015043.1 MGP_129S1SvImJ_G0013132.1 mouse_genomes_project 5 72325782 72326296 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001496.1 MGP_129S1SvImJ_G0001417.1 mouse_genomes_project 5 22177273 22179375 - TEC TEC MGP_129S1SvImJ_T0001497.1 MGP_129S1SvImJ_G0001417.1 mouse_genomes_project 5 22178839 22179373 - TEC TEC MGP_129S1SvImJ_T0008358.1 MGP_129S1SvImJ_G0006796.1 mouse_genomes_project 5 123676959 123685121 - Gm42654 lincRNA lincRNA MGP_129S1SvImJ_T0008359.1 MGP_129S1SvImJ_G0006796.1 mouse_genomes_project 5 123676967 123681712 - Gm42654 lincRNA lincRNA MGP_129S1SvImJ_T0008135.1 MGP_129S1SvImJ_G0006633.1 mouse_genomes_project 5 43687369 44123781 - lincRNA lincRNA MGP_129S1SvImJ_T0008136.1 MGP_129S1SvImJ_G0006633.1 mouse_genomes_project 5 43794111 43864196 - lincRNA lincRNA MGP_129S1SvImJ_T0004900.1 MGP_129S1SvImJ_G0004215.1 mouse_genomes_project 5 148654881 148658339 + 0610040B10Rik antisense antisense MGP_129S1SvImJ_T0004901.1 MGP_129S1SvImJ_G0004215.1 mouse_genomes_project 5 148654942 148656585 + 0610040B10Rik antisense antisense MGP_129S1SvImJ_T0004902.1 MGP_129S1SvImJ_G0004215.1 mouse_genomes_project 5 148654961 148658336 + 0610040B10Rik antisense antisense MGP_129S1SvImJ_T0072158.1 MGP_129S1SvImJ_G0029633.1 mouse_genomes_project 5 74624007 74690370 + MGP_129S1SvImJ_P0072158 Fip1l1 protein_coding protein_coding MGP_129S1SvImJ_T0072159.1 MGP_129S1SvImJ_G0029633.1 mouse_genomes_project 5 74624029 74690380 + MGP_129S1SvImJ_P0072159 Fip1l1 protein_coding protein_coding MGP_129S1SvImJ_T0072160.1 MGP_129S1SvImJ_G0029633.1 mouse_genomes_project 5 74624037 74684013 + MGP_129S1SvImJ_P0072160 Fip1l1 protein_coding protein_coding MGP_129S1SvImJ_T0072161.1 MGP_129S1SvImJ_G0029633.1 mouse_genomes_project 5 74624039 74687724 + MGP_129S1SvImJ_P0072161 Fip1l1 protein_coding protein_coding MGP_129S1SvImJ_T0072162.1 MGP_129S1SvImJ_G0029633.1 mouse_genomes_project 5 74624042 74629127 + Fip1l1 protein_coding retained_intron MGP_129S1SvImJ_T0072163.1 MGP_129S1SvImJ_G0029633.1 mouse_genomes_project 5 74624061 74683395 + MGP_129S1SvImJ_P0072163 Fip1l1 protein_coding protein_coding MGP_129S1SvImJ_T0072164.1 MGP_129S1SvImJ_G0029633.1 mouse_genomes_project 5 74624242 74677127 + Fip1l1 protein_coding retained_intron MGP_129S1SvImJ_T0072165.1 MGP_129S1SvImJ_G0029633.1 mouse_genomes_project 5 74624537 74634007 + Fip1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0072166.1 MGP_129S1SvImJ_G0029633.1 mouse_genomes_project 5 74676432 74683495 + Fip1l1 protein_coding retained_intron MGP_129S1SvImJ_T0072167.1 MGP_129S1SvImJ_G0029633.1 mouse_genomes_project 5 74676477 74679920 + Fip1l1 protein_coding retained_intron MGP_129S1SvImJ_T0072168.1 MGP_129S1SvImJ_G0029633.1 mouse_genomes_project 5 74677824 74680115 + Fip1l1 protein_coding retained_intron MGP_129S1SvImJ_T0072169.1 MGP_129S1SvImJ_G0029633.1 mouse_genomes_project 5 74678498 74683585 + Fip1l1 protein_coding retained_intron MGP_129S1SvImJ_T0072174.1 MGP_129S1SvImJ_G0029633.1 mouse_genomes_project 5 74686298 74687509 + Fip1l1 protein_coding retained_intron MGP_129S1SvImJ_T0015025.1 MGP_129S1SvImJ_G0013114.1 mouse_genomes_project 5 63766346 63767304 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073850.1 MGP_129S1SvImJ_G0029996.1 mouse_genomes_project 5 121404117 121427825 + MGP_129S1SvImJ_P0073850 2410131K14Rik protein_coding protein_coding MGP_129S1SvImJ_T0073884.1 MGP_129S1SvImJ_G0030004.1 mouse_genomes_project 5 123839625 123859633 - MGP_129S1SvImJ_P0073884 Plbd2 protein_coding protein_coding MGP_129S1SvImJ_T0073885.1 MGP_129S1SvImJ_G0030004.1 mouse_genomes_project 5 123841590 123859609 - Plbd2 protein_coding retained_intron MGP_129S1SvImJ_T0073886.1 MGP_129S1SvImJ_G0030004.1 mouse_genomes_project 5 123843642 123859620 - Plbd2 protein_coding retained_intron MGP_129S1SvImJ_T0074538.1 MGP_129S1SvImJ_G0030113.1 mouse_genomes_project 5 129331644 129377649 + MGP_129S1SvImJ_P0074538 Aacs protein_coding protein_coding MGP_129S1SvImJ_T0074539.1 MGP_129S1SvImJ_G0030113.1 mouse_genomes_project 5 129365483 129372978 + Aacs protein_coding retained_intron MGP_129S1SvImJ_T0074540.1 MGP_129S1SvImJ_G0030113.1 mouse_genomes_project 5 129369750 129372136 + Aacs protein_coding retained_intron MGP_129S1SvImJ_T0074541.1 MGP_129S1SvImJ_G0030113.1 mouse_genomes_project 5 129372939 129373442 + Aacs protein_coding processed_transcript MGP_129S1SvImJ_T0074542.1 MGP_129S1SvImJ_G0030113.1 mouse_genomes_project 5 129374437 129375235 + Aacs protein_coding processed_transcript MGP_129S1SvImJ_T0074543.1 MGP_129S1SvImJ_G0030113.1 mouse_genomes_project 5 129375483 129376594 + Aacs protein_coding processed_transcript MGP_129S1SvImJ_T0001529.1 MGP_129S1SvImJ_G0001447.1 mouse_genomes_project 5 33662147 33663387 - TEC TEC MGP_129S1SvImJ_T0073656.1 MGP_129S1SvImJ_G0029962.1 mouse_genomes_project 5 118086776 118118984 - MGP_129S1SvImJ_P0073656 Rnf10 protein_coding protein_coding MGP_129S1SvImJ_T0073657.1 MGP_129S1SvImJ_G0029962.1 mouse_genomes_project 5 118087134 118118978 - MGP_129S1SvImJ_P0073657 Rnf10 protein_coding protein_coding MGP_129S1SvImJ_T0073658.1 MGP_129S1SvImJ_G0029962.1 mouse_genomes_project 5 118087134 118118981 - MGP_129S1SvImJ_P0073658 Rnf10 protein_coding protein_coding MGP_129S1SvImJ_T0073659.1 MGP_129S1SvImJ_G0029962.1 mouse_genomes_project 5 118087139 118088067 - Rnf10 protein_coding retained_intron MGP_129S1SvImJ_T0073660.1 MGP_129S1SvImJ_G0029962.1 mouse_genomes_project 5 118087143 118118393 - MGP_129S1SvImJ_P0073660 Rnf10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073661.1 MGP_129S1SvImJ_G0029962.1 mouse_genomes_project 5 118089067 118091452 - Rnf10 protein_coding retained_intron MGP_129S1SvImJ_T0073662.1 MGP_129S1SvImJ_G0029962.1 mouse_genomes_project 5 118094059 118094854 - Rnf10 protein_coding processed_transcript MGP_129S1SvImJ_T0073663.1 MGP_129S1SvImJ_G0029962.1 mouse_genomes_project 5 118096660 118100616 - Rnf10 protein_coding retained_intron MGP_129S1SvImJ_T0073664.1 MGP_129S1SvImJ_G0029962.1 mouse_genomes_project 5 118096681 118105222 - Rnf10 protein_coding processed_transcript MGP_129S1SvImJ_T0073665.1 MGP_129S1SvImJ_G0029962.1 mouse_genomes_project 5 118101209 118102888 - Rnf10 protein_coding retained_intron MGP_129S1SvImJ_T0073666.1 MGP_129S1SvImJ_G0029962.1 mouse_genomes_project 5 118116718 118118981 - Rnf10 protein_coding retained_intron MGP_129S1SvImJ_T0014978.1 MGP_129S1SvImJ_G0013067.1 mouse_genomes_project 5 40531183 40532459 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001926.1 MGP_129S1SvImJ_G0001839.1 mouse_genomes_project 5 154296220 154296866 - TEC TEC MGP_129S1SvImJ_T0008117.1 MGP_129S1SvImJ_G0006617.1 mouse_genomes_project 5 36385094 36387472 + Gm42505 lincRNA lincRNA MGP_129S1SvImJ_T0072011.1 MGP_129S1SvImJ_G0029605.1 mouse_genomes_project 5 70620850 70704676 - MGP_129S1SvImJ_P0072011 Gabrg1 protein_coding protein_coding MGP_129S1SvImJ_T0072012.1 MGP_129S1SvImJ_G0029605.1 mouse_genomes_project 5 70622221 70704263 - MGP_129S1SvImJ_P0072012 Gabrg1 protein_coding protein_coding MGP_129S1SvImJ_T0072013.1 MGP_129S1SvImJ_G0029605.1 mouse_genomes_project 5 70642273 70704373 - Gabrg1 protein_coding retained_intron MGP_129S1SvImJ_T0072014.1 MGP_129S1SvImJ_G0029605.1 mouse_genomes_project 5 70677226 70704373 - Gabrg1 protein_coding retained_intron MGP_129S1SvImJ_T0099907.1 MGP_129S1SvImJ_G0037974.1 mouse_genomes_project 5 23308859 23309030 + Gm22656 snRNA snRNA MGP_129S1SvImJ_T0008460.1 MGP_129S1SvImJ_G0006866.1 mouse_genomes_project 5 154737218 154787677 - Gm15406 lincRNA lincRNA MGP_129S1SvImJ_T0008462.1 MGP_129S1SvImJ_G0006866.1 mouse_genomes_project 5 154742949 154787620 - Gm15406 lincRNA lincRNA MGP_129S1SvImJ_T0071689.1 MGP_129S1SvImJ_G0029552.1 mouse_genomes_project 5 52124249 52236412 - MGP_129S1SvImJ_P0071689 Sel1l3 protein_coding protein_coding MGP_129S1SvImJ_T0071690.1 MGP_129S1SvImJ_G0029552.1 mouse_genomes_project 5 52163344 52236275 - Sel1l3 protein_coding retained_intron MGP_129S1SvImJ_T0071691.1 MGP_129S1SvImJ_G0029552.1 mouse_genomes_project 5 52173376 52176747 - Sel1l3 protein_coding retained_intron MGP_129S1SvImJ_T0071692.1 MGP_129S1SvImJ_G0029552.1 mouse_genomes_project 5 52175661 52193173 - Sel1l3 protein_coding processed_transcript MGP_129S1SvImJ_T0071693.1 MGP_129S1SvImJ_G0029552.1 mouse_genomes_project 5 52221177 52239755 - Sel1l3 protein_coding retained_intron MGP_129S1SvImJ_T0001888.1 MGP_129S1SvImJ_G0001802.1 mouse_genomes_project 5 136691870 136694732 - TEC TEC MGP_129S1SvImJ_T0072468.1 MGP_129S1SvImJ_G0029698.1 mouse_genomes_project 5 88958425 88960531 + MGP_129S1SvImJ_P0072468 Cabs1 protein_coding protein_coding MGP_129S1SvImJ_T0073941.1 MGP_129S1SvImJ_G0030021.1 mouse_genomes_project 5 124374668 124448760 - MGP_129S1SvImJ_P0073941 Rph3a protein_coding protein_coding MGP_129S1SvImJ_T0073942.1 MGP_129S1SvImJ_G0030021.1 mouse_genomes_project 5 124374668 124448218 - MGP_129S1SvImJ_P0073942 Rph3a protein_coding protein_coding MGP_129S1SvImJ_T0073943.1 MGP_129S1SvImJ_G0030021.1 mouse_genomes_project 5 124376006 124447219 - MGP_129S1SvImJ_P0073943 Rph3a protein_coding protein_coding MGP_129S1SvImJ_T0073944.1 MGP_129S1SvImJ_G0030021.1 mouse_genomes_project 5 124407547 124448772 - MGP_129S1SvImJ_P0073944 Rph3a protein_coding protein_coding MGP_129S1SvImJ_T0074283.1 MGP_129S1SvImJ_G0030074.1 mouse_genomes_project 5 127250651 127263052 - MGP_129S1SvImJ_P0074283 Diablo protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074284.1 MGP_129S1SvImJ_G0030074.1 mouse_genomes_project 5 127250677 127263030 - MGP_129S1SvImJ_P0074284 Diablo protein_coding protein_coding MGP_129S1SvImJ_T0074285.1 MGP_129S1SvImJ_G0030074.1 mouse_genomes_project 5 127251028 127264339 - MGP_129S1SvImJ_P0074285 Diablo protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074286.1 MGP_129S1SvImJ_G0030074.1 mouse_genomes_project 5 127254756 127263046 - MGP_129S1SvImJ_P0074286 Diablo protein_coding protein_coding MGP_129S1SvImJ_T0074287.1 MGP_129S1SvImJ_G0030074.1 mouse_genomes_project 5 127255211 127263043 - MGP_129S1SvImJ_P0074287 Diablo protein_coding protein_coding MGP_129S1SvImJ_T0074288.1 MGP_129S1SvImJ_G0030074.1 mouse_genomes_project 5 127256534 127263043 - MGP_129S1SvImJ_P0074288 Diablo protein_coding protein_coding MGP_129S1SvImJ_T0074289.1 MGP_129S1SvImJ_G0030074.1 mouse_genomes_project 5 127256885 127262405 - Diablo protein_coding retained_intron MGP_129S1SvImJ_T0074290.1 MGP_129S1SvImJ_G0030074.1 mouse_genomes_project 5 127256986 127259704 - Diablo protein_coding retained_intron MGP_129S1SvImJ_T0074291.1 MGP_129S1SvImJ_G0030074.1 mouse_genomes_project 5 127263407 127264398 - Diablo protein_coding processed_transcript MGP_129S1SvImJ_T0073538.1 MGP_129S1SvImJ_G0029937.1 mouse_genomes_project 5 117116570 117157252 + MGP_129S1SvImJ_P0073538 Ube3b protein_coding protein_coding MGP_129S1SvImJ_T0073539.1 MGP_129S1SvImJ_G0029937.1 mouse_genomes_project 5 117116789 117157251 + MGP_129S1SvImJ_P0073539 Ube3b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073540.1 MGP_129S1SvImJ_G0029937.1 mouse_genomes_project 5 117116796 117128167 + MGP_129S1SvImJ_P0073540 Ube3b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073541.1 MGP_129S1SvImJ_G0029937.1 mouse_genomes_project 5 117134848 117157251 + MGP_129S1SvImJ_P0073541 Ube3b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073542.1 MGP_129S1SvImJ_G0029937.1 mouse_genomes_project 5 117138806 117147213 + Ube3b protein_coding processed_transcript MGP_129S1SvImJ_T0001542.1 MGP_129S1SvImJ_G0001460.1 mouse_genomes_project 5 41858343 41861025 + TEC TEC MGP_129S1SvImJ_T0076096.1 MGP_129S1SvImJ_G0030413.1 mouse_genomes_project 5 156620748 156766134 + MGP_129S1SvImJ_P0076096 Pds5b protein_coding protein_coding MGP_129S1SvImJ_T0076097.1 MGP_129S1SvImJ_G0030413.1 mouse_genomes_project 5 156620748 156766959 + MGP_129S1SvImJ_P0076097 Pds5b protein_coding protein_coding MGP_129S1SvImJ_T0076098.1 MGP_129S1SvImJ_G0030413.1 mouse_genomes_project 5 156620836 156766936 + MGP_129S1SvImJ_P0076098 Pds5b protein_coding protein_coding MGP_129S1SvImJ_T0076099.1 MGP_129S1SvImJ_G0030413.1 mouse_genomes_project 5 156703145 156703937 + Pds5b protein_coding retained_intron MGP_129S1SvImJ_T0076100.1 MGP_129S1SvImJ_G0030413.1 mouse_genomes_project 5 156711603 156755387 + MGP_129S1SvImJ_P0076100 Pds5b protein_coding protein_coding MGP_129S1SvImJ_T0076101.1 MGP_129S1SvImJ_G0030413.1 mouse_genomes_project 5 156714659 156725149 + Pds5b protein_coding processed_transcript MGP_129S1SvImJ_T0076102.1 MGP_129S1SvImJ_G0030413.1 mouse_genomes_project 5 156748860 156757676 + Pds5b protein_coding processed_transcript MGP_129S1SvImJ_T0076103.1 MGP_129S1SvImJ_G0030413.1 mouse_genomes_project 5 156761497 156766749 + Pds5b protein_coding retained_intron MGP_129S1SvImJ_T0072804.1 MGP_129S1SvImJ_G0029784.1 mouse_genomes_project 5 101531496 101615145 - MGP_129S1SvImJ_P0072804 Tmem150c protein_coding protein_coding MGP_129S1SvImJ_T0072805.1 MGP_129S1SvImJ_G0029784.1 mouse_genomes_project 5 101538867 101550620 - Tmem150c protein_coding retained_intron MGP_129S1SvImJ_T0072806.1 MGP_129S1SvImJ_G0029784.1 mouse_genomes_project 5 101538868 101577675 - Tmem150c protein_coding retained_intron MGP_129S1SvImJ_T0072807.1 MGP_129S1SvImJ_G0029784.1 mouse_genomes_project 5 101540927 101614907 - Tmem150c protein_coding retained_intron MGP_129S1SvImJ_T0072808.1 MGP_129S1SvImJ_G0029784.1 mouse_genomes_project 5 101541048 101613308 - MGP_129S1SvImJ_P0072808 Tmem150c protein_coding protein_coding MGP_129S1SvImJ_T0001674.1 MGP_129S1SvImJ_G0001590.1 mouse_genomes_project 5 66179262 66179940 - TEC TEC MGP_129S1SvImJ_T0098979.1 MGP_129S1SvImJ_G0037053.1 mouse_genomes_project 5 155927219 155927484 + Gm42558 sense_intronic sense_intronic MGP_129S1SvImJ_T0075110.1 MGP_129S1SvImJ_G0030214.1 mouse_genomes_project 5 141746254 141753222 + MGP_129S1SvImJ_P0075110 Vgf protein_coding protein_coding MGP_129S1SvImJ_T0075111.1 MGP_129S1SvImJ_G0030214.1 mouse_genomes_project 5 141750165 141753222 + MGP_129S1SvImJ_P0075111 Vgf protein_coding protein_coding MGP_129S1SvImJ_T0075112.1 MGP_129S1SvImJ_G0030214.1 mouse_genomes_project 5 141750234 141752899 + MGP_129S1SvImJ_P0075112 Vgf protein_coding protein_coding MGP_129S1SvImJ_T0075113.1 MGP_129S1SvImJ_G0030214.1 mouse_genomes_project 5 141750571 141751278 + MGP_129S1SvImJ_P0075113 Vgf protein_coding protein_coding MGP_129S1SvImJ_T0071655.1 MGP_129S1SvImJ_G0029546.1 mouse_genomes_project 5 51514939 51547540 - MGP_129S1SvImJ_P0071655 Lgi2 protein_coding protein_coding MGP_129S1SvImJ_T0071656.1 MGP_129S1SvImJ_G0029546.1 mouse_genomes_project 5 51514939 51548697 - MGP_129S1SvImJ_P0071656 Lgi2 protein_coding protein_coding MGP_129S1SvImJ_T0076004.1 MGP_129S1SvImJ_G0030400.1 mouse_genomes_project 5 154998386 155028876 + MGP_129S1SvImJ_P0076004 Uspl1 protein_coding protein_coding MGP_129S1SvImJ_T0076005.1 MGP_129S1SvImJ_G0030400.1 mouse_genomes_project 5 154998397 155008047 + MGP_129S1SvImJ_P0076005 Uspl1 protein_coding protein_coding MGP_129S1SvImJ_T0076006.1 MGP_129S1SvImJ_G0030400.1 mouse_genomes_project 5 154998397 155028876 + MGP_129S1SvImJ_P0076006 Uspl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076007.1 MGP_129S1SvImJ_G0030400.1 mouse_genomes_project 5 154998500 155007814 + Uspl1 protein_coding processed_transcript MGP_129S1SvImJ_T0076008.1 MGP_129S1SvImJ_G0030400.1 mouse_genomes_project 5 154999972 155002724 + Uspl1 protein_coding retained_intron MGP_129S1SvImJ_T0076009.1 MGP_129S1SvImJ_G0030400.1 mouse_genomes_project 5 155001494 155028707 + MGP_129S1SvImJ_P0076009 Uspl1 protein_coding protein_coding MGP_129S1SvImJ_T0076010.1 MGP_129S1SvImJ_G0030400.1 mouse_genomes_project 5 155002578 155003860 + Uspl1 protein_coding retained_intron MGP_129S1SvImJ_T0076011.1 MGP_129S1SvImJ_G0030400.1 mouse_genomes_project 5 155005055 155028880 + Uspl1 protein_coding retained_intron MGP_129S1SvImJ_T0001728.1 MGP_129S1SvImJ_G0001643.1 mouse_genomes_project 5 82728075 82729492 - TEC TEC MGP_129S1SvImJ_T0074656.1 MGP_129S1SvImJ_G0030136.1 mouse_genomes_project 5 134047844 134093824 + MGP_129S1SvImJ_P0074656 Vkorc1l1 protein_coding protein_coding MGP_129S1SvImJ_T0074657.1 MGP_129S1SvImJ_G0030136.1 mouse_genomes_project 5 134047909 134089279 + MGP_129S1SvImJ_P0074657 Vkorc1l1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0001591.1 MGP_129S1SvImJ_G0001508.1 mouse_genomes_project 5 47856750 47858082 - TEC TEC MGP_129S1SvImJ_T0001599.1 MGP_129S1SvImJ_G0001516.1 mouse_genomes_project 5 48063664 48066150 - TEC TEC MGP_129S1SvImJ_T0010753.1 MGP_129S1SvImJ_G0008869.1 mouse_genomes_project 5 144781953 144782018 - Mir7037 miRNA miRNA MGP_129S1SvImJ_T0015086.1 MGP_129S1SvImJ_G0013175.1 mouse_genomes_project 5 91193303 91193750 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0071152.1 MGP_129S1SvImJ_G0029464.1 mouse_genomes_project 5 32595790 32725476 + MGP_129S1SvImJ_P0071152 Fam193a protein_coding protein_coding MGP_129S1SvImJ_T0071153.1 MGP_129S1SvImJ_G0029464.1 mouse_genomes_project 5 32644119 32731232 + MGP_129S1SvImJ_P0071153 Fam193a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0071154.1 MGP_129S1SvImJ_G0029464.1 mouse_genomes_project 5 32663651 32724767 + MGP_129S1SvImJ_P0071154 Fam193a protein_coding protein_coding MGP_129S1SvImJ_T0071155.1 MGP_129S1SvImJ_G0029464.1 mouse_genomes_project 5 32668533 32680911 + MGP_129S1SvImJ_P0071155 Fam193a protein_coding protein_coding MGP_129S1SvImJ_T0071156.1 MGP_129S1SvImJ_G0029464.1 mouse_genomes_project 5 32681004 32696436 + MGP_129S1SvImJ_P0071156 Fam193a protein_coding protein_coding MGP_129S1SvImJ_T0071157.1 MGP_129S1SvImJ_G0029464.1 mouse_genomes_project 5 32703514 32716711 + MGP_129S1SvImJ_P0071157 Fam193a protein_coding protein_coding MGP_129S1SvImJ_T0098599.1 MGP_129S1SvImJ_G0036684.1 mouse_genomes_project 5 35432660 35432763 - Gm25551 rRNA rRNA MGP_129S1SvImJ_T0072581.1 MGP_129S1SvImJ_G0029734.1 mouse_genomes_project 5 92107803 92115353 + MGP_129S1SvImJ_P0072581 Epgn protein_coding protein_coding MGP_129S1SvImJ_T0072582.1 MGP_129S1SvImJ_G0029734.1 mouse_genomes_project 5 92107803 92116355 + MGP_129S1SvImJ_P0072582 Epgn protein_coding protein_coding MGP_129S1SvImJ_T0008068.1 MGP_129S1SvImJ_G0006588.1 mouse_genomes_project 5 20969847 20986787 - Gm42951 lincRNA lincRNA MGP_129S1SvImJ_T0072398.1 MGP_129S1SvImJ_G0029677.1 mouse_genomes_project 5 87861745 87875015 + MGP_129S1SvImJ_P0072398 Ugt2b35 protein_coding protein_coding MGP_129S1SvImJ_T0001714.1 MGP_129S1SvImJ_G0001629.1 mouse_genomes_project 5 74237939 74241829 - TEC TEC MGP_129S1SvImJ_T0101718.1 MGP_129S1SvImJ_G0039722.1 mouse_genomes_project 5 55628856 55716611 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0072293.1 MGP_129S1SvImJ_G0029655.1 mouse_genomes_project 5 77456041 77464742 - MGP_129S1SvImJ_P0072293 Spink2 protein_coding protein_coding MGP_129S1SvImJ_T0072294.1 MGP_129S1SvImJ_G0029655.1 mouse_genomes_project 5 77456041 77464709 - MGP_129S1SvImJ_P0072294 Spink2 protein_coding protein_coding MGP_129S1SvImJ_T0072295.1 MGP_129S1SvImJ_G0029655.1 mouse_genomes_project 5 77456046 77464476 - MGP_129S1SvImJ_P0072295 Spink2 protein_coding protein_coding MGP_129S1SvImJ_T0004813.1 MGP_129S1SvImJ_G0004154.1 mouse_genomes_project 5 119218719 119229974 + Gm14507 antisense antisense MGP_129S1SvImJ_T0070791.1 MGP_129S1SvImJ_G0029409.1 mouse_genomes_project 5 29086931 29094331 + MGP_129S1SvImJ_P0070791 Dnajc5g protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070792.1 MGP_129S1SvImJ_G0029409.1 mouse_genomes_project 5 29090651 29094086 + MGP_129S1SvImJ_P0070792 Dnajc5g protein_coding protein_coding MGP_129S1SvImJ_T0070793.1 MGP_129S1SvImJ_G0029409.1 mouse_genomes_project 5 29090661 29094190 + MGP_129S1SvImJ_P0070793 Dnajc5g protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070794.1 MGP_129S1SvImJ_G0029409.1 mouse_genomes_project 5 29090663 29094873 + MGP_129S1SvImJ_P0070794 Dnajc5g protein_coding protein_coding MGP_129S1SvImJ_T0074458.1 MGP_129S1SvImJ_G0030099.1 mouse_genomes_project 5 128371429 128381047 + MGP_129S1SvImJ_P0074458 Tmed2 protein_coding protein_coding MGP_129S1SvImJ_T0074459.1 MGP_129S1SvImJ_G0030099.1 mouse_genomes_project 5 128371689 128379923 + MGP_129S1SvImJ_P0074459 Tmed2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074460.1 MGP_129S1SvImJ_G0030099.1 mouse_genomes_project 5 128372063 128380114 + MGP_129S1SvImJ_P0074460 Tmed2 protein_coding protein_coding MGP_129S1SvImJ_T0074461.1 MGP_129S1SvImJ_G0030099.1 mouse_genomes_project 5 128372070 128372496 + Tmed2 protein_coding retained_intron MGP_129S1SvImJ_T0018157.1 MGP_129S1SvImJ_G0015592.1 mouse_genomes_project 5 28526122 28542021 - Gm9899 processed_transcript lincRNA MGP_129S1SvImJ_T0018158.1 MGP_129S1SvImJ_G0015592.1 mouse_genomes_project 5 28529602 28530161 - Gm9899 processed_transcript pseudogene MGP_129S1SvImJ_T0018159.1 MGP_129S1SvImJ_G0015592.1 mouse_genomes_project 5 28530084 28531991 - Gm9899 processed_transcript retained_intron MGP_129S1SvImJ_T0001590.1 MGP_129S1SvImJ_G0001507.1 mouse_genomes_project 5 47852420 47853715 - TEC TEC MGP_129S1SvImJ_T0099938.1 MGP_129S1SvImJ_G0038005.1 mouse_genomes_project 5 86907347 86907517 + Gm24524 snRNA snRNA MGP_129S1SvImJ_T0076030.1 MGP_129S1SvImJ_G0030405.1 mouse_genomes_project 5 155460132 155485289 - MGP_129S1SvImJ_P0076030 Hsph1 protein_coding protein_coding MGP_129S1SvImJ_T0076031.1 MGP_129S1SvImJ_G0030405.1 mouse_genomes_project 5 155462389 155485456 - MGP_129S1SvImJ_P0076031 Hsph1 protein_coding protein_coding MGP_129S1SvImJ_T0076032.1 MGP_129S1SvImJ_G0030405.1 mouse_genomes_project 5 155462690 155485327 - MGP_129S1SvImJ_P0076032 Hsph1 protein_coding protein_coding MGP_129S1SvImJ_T0076033.1 MGP_129S1SvImJ_G0030405.1 mouse_genomes_project 5 155463014 155485456 - MGP_129S1SvImJ_P0076033 Hsph1 protein_coding protein_coding MGP_129S1SvImJ_T0076034.1 MGP_129S1SvImJ_G0030405.1 mouse_genomes_project 5 155463300 155465019 - Hsph1 protein_coding retained_intron MGP_129S1SvImJ_T0076035.1 MGP_129S1SvImJ_G0030405.1 mouse_genomes_project 5 155465738 155467033 - Hsph1 protein_coding retained_intron MGP_129S1SvImJ_T0076036.1 MGP_129S1SvImJ_G0030405.1 mouse_genomes_project 5 155466527 155485456 - Hsph1 protein_coding retained_intron MGP_129S1SvImJ_T0076037.1 MGP_129S1SvImJ_G0030405.1 mouse_genomes_project 5 155479101 155485494 - MGP_129S1SvImJ_P0076037 Hsph1 protein_coding protein_coding MGP_129S1SvImJ_T0076038.1 MGP_129S1SvImJ_G0030405.1 mouse_genomes_project 5 155479557 155485408 - MGP_129S1SvImJ_P0076038 Hsph1 protein_coding protein_coding MGP_129S1SvImJ_T0076039.1 MGP_129S1SvImJ_G0030405.1 mouse_genomes_project 5 155481156 155485469 - MGP_129S1SvImJ_P0076039 Hsph1 protein_coding protein_coding MGP_129S1SvImJ_T0076040.1 MGP_129S1SvImJ_G0030405.1 mouse_genomes_project 5 155481215 155483005 - Hsph1 protein_coding processed_transcript MGP_129S1SvImJ_T0008307.1 MGP_129S1SvImJ_G0006760.1 mouse_genomes_project 5 114785864 114787295 + lincRNA lincRNA MGP_129S1SvImJ_T0074960.1 MGP_129S1SvImJ_G0030188.1 mouse_genomes_project 5 140313742 140325503 - MGP_129S1SvImJ_P0074960 Tmem120a protein_coding protein_coding MGP_129S1SvImJ_T0074961.1 MGP_129S1SvImJ_G0030188.1 mouse_genomes_project 5 140313761 140314848 - Tmem120a protein_coding retained_intron MGP_129S1SvImJ_T0074962.1 MGP_129S1SvImJ_G0030188.1 mouse_genomes_project 5 140313795 140315494 - Tmem120a protein_coding processed_transcript MGP_129S1SvImJ_T0074963.1 MGP_129S1SvImJ_G0030188.1 mouse_genomes_project 5 140314512 140323454 - Tmem120a protein_coding retained_intron MGP_129S1SvImJ_T0074964.1 MGP_129S1SvImJ_G0030188.1 mouse_genomes_project 5 140315465 140325263 - MGP_129S1SvImJ_P0074964 Tmem120a protein_coding protein_coding MGP_129S1SvImJ_T0008204.1 MGP_129S1SvImJ_G0006688.1 mouse_genomes_project 5 87576248 87670801 + Gm43055 lincRNA lincRNA MGP_129S1SvImJ_T0073744.1 MGP_129S1SvImJ_G0029977.1 mouse_genomes_project 5 118765316 118856123 + Cit protein_coding retained_intron MGP_129S1SvImJ_T0073745.1 MGP_129S1SvImJ_G0029977.1 mouse_genomes_project 5 118765318 118795497 + MGP_129S1SvImJ_P0073745 Cit protein_coding protein_coding MGP_129S1SvImJ_T0073746.1 MGP_129S1SvImJ_G0029977.1 mouse_genomes_project 5 118765319 118795515 + MGP_129S1SvImJ_P0073746 Cit protein_coding protein_coding MGP_129S1SvImJ_T0073747.1 MGP_129S1SvImJ_G0029977.1 mouse_genomes_project 5 118765682 118856130 + Cit protein_coding retained_intron MGP_129S1SvImJ_T0073748.1 MGP_129S1SvImJ_G0029977.1 mouse_genomes_project 5 118765682 118939602 + MGP_129S1SvImJ_P0073748 Cit protein_coding protein_coding MGP_129S1SvImJ_T0073749.1 MGP_129S1SvImJ_G0029977.1 mouse_genomes_project 5 118765682 118944112 + MGP_129S1SvImJ_P0073749 Cit protein_coding protein_coding MGP_129S1SvImJ_T0073750.1 MGP_129S1SvImJ_G0029977.1 mouse_genomes_project 5 118766409 118939577 + MGP_129S1SvImJ_P0073750 Cit protein_coding protein_coding MGP_129S1SvImJ_T0073751.1 MGP_129S1SvImJ_G0029977.1 mouse_genomes_project 5 118766409 118939577 + MGP_129S1SvImJ_P0073751 Cit protein_coding protein_coding MGP_129S1SvImJ_T0073752.1 MGP_129S1SvImJ_G0029977.1 mouse_genomes_project 5 118766499 118776333 + Cit protein_coding processed_transcript MGP_129S1SvImJ_T0073753.1 MGP_129S1SvImJ_G0029977.1 mouse_genomes_project 5 118771014 118784644 + Cit protein_coding retained_intron MGP_129S1SvImJ_T0073754.1 MGP_129S1SvImJ_G0029977.1 mouse_genomes_project 5 118809568 118810752 + Cit protein_coding retained_intron MGP_129S1SvImJ_T0073755.1 MGP_129S1SvImJ_G0029977.1 mouse_genomes_project 5 118833975 118856021 + Cit protein_coding retained_intron MGP_129S1SvImJ_T0073756.1 MGP_129S1SvImJ_G0029977.1 mouse_genomes_project 5 118834026 118939577 + MGP_129S1SvImJ_P0073756 Cit protein_coding unknown_likely_coding MGP_129S1SvImJ_T0073757.1 MGP_129S1SvImJ_G0029977.1 mouse_genomes_project 5 118856061 118940044 + Cit protein_coding processed_transcript MGP_129S1SvImJ_T0073758.1 MGP_129S1SvImJ_G0029977.1 mouse_genomes_project 5 118856502 118939617 + Cit protein_coding processed_transcript MGP_129S1SvImJ_T0073759.1 MGP_129S1SvImJ_G0029977.1 mouse_genomes_project 5 118864053 118877389 + Cit protein_coding processed_transcript MGP_129S1SvImJ_T0073760.1 MGP_129S1SvImJ_G0029977.1 mouse_genomes_project 5 118875752 118930730 + Cit protein_coding retained_intron MGP_129S1SvImJ_T0073761.1 MGP_129S1SvImJ_G0029977.1 mouse_genomes_project 5 118881503 118883063 + Cit protein_coding processed_transcript MGP_129S1SvImJ_T0073762.1 MGP_129S1SvImJ_G0029977.1 mouse_genomes_project 5 118898434 118939614 + MGP_129S1SvImJ_P0073762 Cit protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073763.1 MGP_129S1SvImJ_G0029977.1 mouse_genomes_project 5 118919162 118922775 + Cit protein_coding retained_intron MGP_129S1SvImJ_T0071360.1 MGP_129S1SvImJ_G0029497.1 mouse_genomes_project 5 35299776 35322703 - MGP_129S1SvImJ_P0071360 Wfs1 protein_coding protein_coding MGP_129S1SvImJ_T0071361.1 MGP_129S1SvImJ_G0029497.1 mouse_genomes_project 5 35299779 35322431 - MGP_129S1SvImJ_P0071361 Wfs1 protein_coding protein_coding MGP_129S1SvImJ_T0071362.1 MGP_129S1SvImJ_G0029497.1 mouse_genomes_project 5 35302175 35310631 - MGP_129S1SvImJ_P0071362 Wfs1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0099930.1 MGP_129S1SvImJ_G0037997.1 mouse_genomes_project 5 75502508 75502613 - Gm22084 snRNA snRNA MGP_129S1SvImJ_T0015148.1 MGP_129S1SvImJ_G0013237.1 mouse_genomes_project 5 113356744 113357415 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008472.1 MGP_129S1SvImJ_G0006875.1 mouse_genomes_project 5 155049651 155056308 + 2310047D07Rik lincRNA lincRNA MGP_129S1SvImJ_T0008474.1 MGP_129S1SvImJ_G0006875.1 mouse_genomes_project 5 155055477 155056290 + 2310047D07Rik lincRNA lincRNA MGP_129S1SvImJ_T0014942.1 MGP_129S1SvImJ_G0013031.1 mouse_genomes_project 5 27631361 27631653 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004870.1 MGP_129S1SvImJ_G0004194.1 mouse_genomes_project 5 138964143 138970420 + Gm42884 antisense antisense MGP_129S1SvImJ_T0004871.1 MGP_129S1SvImJ_G0004194.1 mouse_genomes_project 5 138968617 138970620 + Gm42884 antisense antisense MGP_129S1SvImJ_T0015050.1 MGP_129S1SvImJ_G0013139.1 mouse_genomes_project 5 75225157 75225446 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001854.1 MGP_129S1SvImJ_G0001768.1 mouse_genomes_project 5 131571241 131572015 + TEC TEC MGP_129S1SvImJ_T0075743.1 MGP_129S1SvImJ_G0030344.1 mouse_genomes_project 5 149330691 149338034 - MGP_129S1SvImJ_P0075743 Ocm protein_coding protein_coding MGP_129S1SvImJ_T0075744.1 MGP_129S1SvImJ_G0030344.1 mouse_genomes_project 5 149330963 149337141 - MGP_129S1SvImJ_P0075744 Ocm protein_coding protein_coding MGP_129S1SvImJ_T0075745.1 MGP_129S1SvImJ_G0030344.1 mouse_genomes_project 5 149335873 149338105 - MGP_129S1SvImJ_P0075745 Ocm protein_coding protein_coding MGP_129S1SvImJ_T0072999.1 MGP_129S1SvImJ_G0029830.1 mouse_genomes_project 5 108576746 108576850 + MGP_129S1SvImJ_P0072999 Gm17304 protein_coding protein_coding MGP_129S1SvImJ_T0071617.1 MGP_129S1SvImJ_G0029539.1 mouse_genomes_project 5 47129303 47182528 + 5730480H06Rik protein_coding processed_transcript MGP_129S1SvImJ_T0071618.1 MGP_129S1SvImJ_G0029539.1 mouse_genomes_project 5 47174650 47191168 + MGP_129S1SvImJ_P0071618 5730480H06Rik protein_coding protein_coding MGP_129S1SvImJ_T0071619.1 MGP_129S1SvImJ_G0029539.1 mouse_genomes_project 5 47174650 47191168 + MGP_129S1SvImJ_P0071619 5730480H06Rik protein_coding protein_coding MGP_129S1SvImJ_T0071620.1 MGP_129S1SvImJ_G0029539.1 mouse_genomes_project 5 47174754 47191169 + MGP_129S1SvImJ_P0071620 5730480H06Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071621.1 MGP_129S1SvImJ_G0029539.1 mouse_genomes_project 5 47176756 47198934 + MGP_129S1SvImJ_P0071621 5730480H06Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071622.1 MGP_129S1SvImJ_G0029539.1 mouse_genomes_project 5 47182441 47190879 + 5730480H06Rik protein_coding retained_intron MGP_129S1SvImJ_T0071630.1 MGP_129S1SvImJ_G0029539.1 mouse_genomes_project 5 47196153 47201558 + 5730480H06Rik protein_coding retained_intron MGP_129S1SvImJ_T0071631.1 MGP_129S1SvImJ_G0029539.1 mouse_genomes_project 5 47198893 47217582 + 5730480H06Rik protein_coding retained_intron MGP_129S1SvImJ_T0071632.1 MGP_129S1SvImJ_G0029539.1 mouse_genomes_project 5 47199980 47217611 + 5730480H06Rik protein_coding processed_transcript MGP_129S1SvImJ_T0004817.1 MGP_129S1SvImJ_G0004157.1 mouse_genomes_project 5 120172737 120176240 + 9530046B11Rik antisense antisense MGP_129S1SvImJ_T0001593.1 MGP_129S1SvImJ_G0001510.1 mouse_genomes_project 5 47909189 47912649 + TEC TEC MGP_129S1SvImJ_T0070544.1 MGP_129S1SvImJ_G0029362.1 mouse_genomes_project 5 23314098 23316059 + MGP_129S1SvImJ_P0070544 Cct8l1 protein_coding protein_coding MGP_129S1SvImJ_T0010732.1 MGP_129S1SvImJ_G0008848.1 mouse_genomes_project 5 127261550 127261609 - Mir7647 miRNA miRNA MGP_129S1SvImJ_T0070757.1 MGP_129S1SvImJ_G0029405.1 mouse_genomes_project 5 29002672 29015748 - MGP_129S1SvImJ_P0070757 Slc5a6 protein_coding protein_coding MGP_129S1SvImJ_T0070758.1 MGP_129S1SvImJ_G0029405.1 mouse_genomes_project 5 29002672 29016670 - MGP_129S1SvImJ_P0070758 Slc5a6 protein_coding protein_coding MGP_129S1SvImJ_T0070759.1 MGP_129S1SvImJ_G0029405.1 mouse_genomes_project 5 29002672 29016308 - MGP_129S1SvImJ_P0070759 Slc5a6 protein_coding protein_coding MGP_129S1SvImJ_T0070760.1 MGP_129S1SvImJ_G0029405.1 mouse_genomes_project 5 29002673 29015755 - MGP_129S1SvImJ_P0070760 Slc5a6 protein_coding protein_coding MGP_129S1SvImJ_T0070761.1 MGP_129S1SvImJ_G0029405.1 mouse_genomes_project 5 29003519 29004626 - Slc5a6 protein_coding retained_intron MGP_129S1SvImJ_T0070762.1 MGP_129S1SvImJ_G0029405.1 mouse_genomes_project 5 29005983 29009235 - MGP_129S1SvImJ_P0070762 Slc5a6 protein_coding protein_coding MGP_129S1SvImJ_T0070763.1 MGP_129S1SvImJ_G0029405.1 mouse_genomes_project 5 29009724 29015825 - MGP_129S1SvImJ_P0070763 Slc5a6 protein_coding protein_coding MGP_129S1SvImJ_T0001801.1 MGP_129S1SvImJ_G0001716.1 mouse_genomes_project 5 119365680 119367143 - TEC TEC MGP_129S1SvImJ_T0074437.1 MGP_129S1SvImJ_G0030095.1 mouse_genomes_project 5 128257871 128286747 + MGP_129S1SvImJ_P0074437 Kmt5a protein_coding protein_coding MGP_129S1SvImJ_T0074438.1 MGP_129S1SvImJ_G0030095.1 mouse_genomes_project 5 128257908 128285949 + MGP_129S1SvImJ_P0074438 Kmt5a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074439.1 MGP_129S1SvImJ_G0030095.1 mouse_genomes_project 5 128257926 128259197 + Kmt5a protein_coding retained_intron MGP_129S1SvImJ_T0074440.1 MGP_129S1SvImJ_G0030095.1 mouse_genomes_project 5 128264718 128285981 + Kmt5a protein_coding processed_transcript MGP_129S1SvImJ_T0074441.1 MGP_129S1SvImJ_G0030095.1 mouse_genomes_project 5 128266084 128271652 + Kmt5a protein_coding retained_intron MGP_129S1SvImJ_T0074442.1 MGP_129S1SvImJ_G0030095.1 mouse_genomes_project 5 128266277 128286732 + MGP_129S1SvImJ_P0074442 Kmt5a protein_coding protein_coding MGP_129S1SvImJ_T0074443.1 MGP_129S1SvImJ_G0030095.1 mouse_genomes_project 5 128267004 128279262 + Kmt5a protein_coding processed_transcript MGP_129S1SvImJ_T0074444.1 MGP_129S1SvImJ_G0030095.1 mouse_genomes_project 5 128267262 128285069 + Kmt5a protein_coding processed_transcript MGP_129S1SvImJ_T0074445.1 MGP_129S1SvImJ_G0030095.1 mouse_genomes_project 5 128267305 128271119 + Kmt5a protein_coding processed_transcript MGP_129S1SvImJ_T0074446.1 MGP_129S1SvImJ_G0030095.1 mouse_genomes_project 5 128270505 128284230 + Kmt5a protein_coding processed_transcript MGP_129S1SvImJ_T0074447.1 MGP_129S1SvImJ_G0030095.1 mouse_genomes_project 5 128270718 128284381 + Kmt5a protein_coding retained_intron MGP_129S1SvImJ_T0074448.1 MGP_129S1SvImJ_G0030095.1 mouse_genomes_project 5 128271519 128285275 + Kmt5a protein_coding retained_intron MGP_129S1SvImJ_T0070631.1 MGP_129S1SvImJ_G0029382.1 mouse_genomes_project 5 28074115 28089657 - MGP_129S1SvImJ_P0070631 3110082J24Rik protein_coding protein_coding MGP_129S1SvImJ_T0070632.1 MGP_129S1SvImJ_G0029382.1 mouse_genomes_project 5 28087512 28088930 - MGP_129S1SvImJ_P0070632 3110082J24Rik protein_coding protein_coding MGP_129S1SvImJ_T0008079.1 MGP_129S1SvImJ_G0006597.1 mouse_genomes_project 5 23481774 23483335 + Gm43972 lincRNA lincRNA MGP_129S1SvImJ_T0073090.1 MGP_129S1SvImJ_G0029846.1 mouse_genomes_project 5 109884322 109886000 + MGP_129S1SvImJ_P0073090 Ube2d2b protein_coding protein_coding MGP_129S1SvImJ_T0098369.1 MGP_129S1SvImJ_G0036454.1 mouse_genomes_project 5 118966718 118966889 - pseudogene pseudogene MGP_129S1SvImJ_T0008448.1 MGP_129S1SvImJ_G0006854.1 mouse_genomes_project 5 151765622 151767161 - Gm43625 lincRNA lincRNA MGP_129S1SvImJ_T0075765.1 MGP_129S1SvImJ_G0030350.1 mouse_genomes_project 5 149911218 149926488 + MGP_129S1SvImJ_P0075765 Nptx2 protein_coding protein_coding MGP_129S1SvImJ_T0075303.1 MGP_129S1SvImJ_G0030254.1 mouse_genomes_project 5 142908548 142929427 + MGP_129S1SvImJ_P0075303 Zscan21 protein_coding protein_coding MGP_129S1SvImJ_T0075304.1 MGP_129S1SvImJ_G0030254.1 mouse_genomes_project 5 142908561 142929479 + MGP_129S1SvImJ_P0075304 Zscan21 protein_coding protein_coding MGP_129S1SvImJ_T0075305.1 MGP_129S1SvImJ_G0030254.1 mouse_genomes_project 5 142908582 142929428 + MGP_129S1SvImJ_P0075305 Zscan21 protein_coding protein_coding MGP_129S1SvImJ_T0075306.1 MGP_129S1SvImJ_G0030254.1 mouse_genomes_project 5 142908582 142929479 + MGP_129S1SvImJ_P0075306 Zscan21 protein_coding protein_coding MGP_129S1SvImJ_T0075307.1 MGP_129S1SvImJ_G0030254.1 mouse_genomes_project 5 142908625 142928461 + MGP_129S1SvImJ_P0075307 Zscan21 protein_coding protein_coding MGP_129S1SvImJ_T0075308.1 MGP_129S1SvImJ_G0030254.1 mouse_genomes_project 5 142908627 142920760 + MGP_129S1SvImJ_P0075308 Zscan21 protein_coding protein_coding MGP_129S1SvImJ_T0075309.1 MGP_129S1SvImJ_G0030254.1 mouse_genomes_project 5 142908686 142929430 + MGP_129S1SvImJ_P0075309 Zscan21 protein_coding protein_coding MGP_129S1SvImJ_T0075733.1 MGP_129S1SvImJ_G0030342.1 mouse_genomes_project 5 149237091 149250484 + Rsph10b protein_coding processed_transcript MGP_129S1SvImJ_T0075734.1 MGP_129S1SvImJ_G0030342.1 mouse_genomes_project 5 149237118 149293239 + MGP_129S1SvImJ_P0075734 Rsph10b protein_coding protein_coding MGP_129S1SvImJ_T0075735.1 MGP_129S1SvImJ_G0030342.1 mouse_genomes_project 5 149241139 149293243 + MGP_129S1SvImJ_P0075735 Rsph10b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0075736.1 MGP_129S1SvImJ_G0030342.1 mouse_genomes_project 5 149241139 149250481 + MGP_129S1SvImJ_P0075736 Rsph10b protein_coding protein_coding MGP_129S1SvImJ_T0075737.1 MGP_129S1SvImJ_G0030342.1 mouse_genomes_project 5 149288670 149293048 + Rsph10b protein_coding processed_transcript MGP_129S1SvImJ_T0014989.1 MGP_129S1SvImJ_G0013078.1 mouse_genomes_project 5 48273713 48274026 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0071139.1 MGP_129S1SvImJ_G0029462.1 mouse_genomes_project 5 32512668 32547991 + MGP_129S1SvImJ_P0071139 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0074351.1 MGP_129S1SvImJ_G0030082.1 mouse_genomes_project 5 127680889 127703619 + MGP_129S1SvImJ_P0074351 Denr protein_coding protein_coding MGP_129S1SvImJ_T0074352.1 MGP_129S1SvImJ_G0030082.1 mouse_genomes_project 5 127680983 127682223 + Denr protein_coding processed_transcript MGP_129S1SvImJ_T0074353.1 MGP_129S1SvImJ_G0030082.1 mouse_genomes_project 5 127680989 127684952 + Denr protein_coding retained_intron MGP_129S1SvImJ_T0074354.1 MGP_129S1SvImJ_G0030082.1 mouse_genomes_project 5 127680996 127682203 + Denr protein_coding retained_intron MGP_129S1SvImJ_T0074355.1 MGP_129S1SvImJ_G0030082.1 mouse_genomes_project 5 127681203 127701919 + MGP_129S1SvImJ_P0074355 Denr protein_coding protein_coding MGP_129S1SvImJ_T0070847.1 MGP_129S1SvImJ_G0029417.1 mouse_genomes_project 5 29187545 29190868 - MGP_129S1SvImJ_P0070847 Zfp513 protein_coding protein_coding MGP_129S1SvImJ_T0070848.1 MGP_129S1SvImJ_G0029417.1 mouse_genomes_project 5 29187547 29190607 - MGP_129S1SvImJ_P0070848 Zfp513 protein_coding protein_coding MGP_129S1SvImJ_T0070849.1 MGP_129S1SvImJ_G0029417.1 mouse_genomes_project 5 29188064 29189326 - Zfp513 protein_coding processed_transcript MGP_129S1SvImJ_T0070850.1 MGP_129S1SvImJ_G0029417.1 mouse_genomes_project 5 29188345 29188851 - MGP_129S1SvImJ_P0070850 Zfp513 protein_coding protein_coding MGP_129S1SvImJ_T0070851.1 MGP_129S1SvImJ_G0029417.1 mouse_genomes_project 5 29188445 29189327 - Zfp513 protein_coding processed_transcript MGP_129S1SvImJ_T0070852.1 MGP_129S1SvImJ_G0029417.1 mouse_genomes_project 5 29188553 29189327 - Zfp513 protein_coding processed_transcript MGP_129S1SvImJ_T0070853.1 MGP_129S1SvImJ_G0029417.1 mouse_genomes_project 5 29189233 29190780 - MGP_129S1SvImJ_P0070853 Zfp513 protein_coding protein_coding MGP_129S1SvImJ_T0070854.1 MGP_129S1SvImJ_G0029417.1 mouse_genomes_project 5 29189320 29190790 - MGP_129S1SvImJ_P0070854 Zfp513 protein_coding protein_coding MGP_129S1SvImJ_T0001924.1 MGP_129S1SvImJ_G0001837.1 mouse_genomes_project 5 153094293 153095343 + TEC TEC MGP_129S1SvImJ_T0098954.1 MGP_129S1SvImJ_G0037032.1 mouse_genomes_project 5 43368069 43376723 - Gm3364 sense_intronic sense_intronic MGP_129S1SvImJ_T0001918.1 MGP_129S1SvImJ_G0001831.1 mouse_genomes_project 5 148725417 148728159 + TEC TEC MGP_129S1SvImJ_T0001713.1 MGP_129S1SvImJ_G0001628.1 mouse_genomes_project 5 74152771 74154662 - TEC TEC MGP_129S1SvImJ_T0001520.1 MGP_129S1SvImJ_G0001438.1 mouse_genomes_project 5 30700989 30705983 - TEC TEC MGP_129S1SvImJ_T0001831.1 MGP_129S1SvImJ_G0001746.1 mouse_genomes_project 5 126127088 126129976 - TEC TEC MGP_129S1SvImJ_T0014864.1 MGP_129S1SvImJ_G0012953.1 mouse_genomes_project 5 1968563 2706948 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004894.1 MGP_129S1SvImJ_G0004210.1 mouse_genomes_project 5 145117949 145130934 + Gm16122 antisense antisense MGP_129S1SvImJ_T0099047.1 MGP_129S1SvImJ_G0037115.1 mouse_genomes_project 5 127247342 127252977 + Gm15751 sense_overlapping sense_overlapping MGP_129S1SvImJ_T0070986.1 MGP_129S1SvImJ_G0029437.1 mouse_genomes_project 5 30850229 30870228 - MGP_129S1SvImJ_P0070986 protein_coding protein_coding MGP_129S1SvImJ_T0070987.1 MGP_129S1SvImJ_G0029437.1 mouse_genomes_project 5 30870201 30919943 - MGP_129S1SvImJ_P0070987 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0070988.1 MGP_129S1SvImJ_G0029437.1 mouse_genomes_project 5 30895558 30919956 - protein_coding retained_intron MGP_129S1SvImJ_T0004673.1 MGP_129S1SvImJ_G0004050.1 mouse_genomes_project 5 28773786 28778409 - Gm15461 antisense antisense MGP_129S1SvImJ_T0001697.1 MGP_129S1SvImJ_G0001613.1 mouse_genomes_project 5 69119810 69121650 - TEC TEC MGP_129S1SvImJ_T0010741.1 MGP_129S1SvImJ_G0008857.1 mouse_genomes_project 5 140430483 140430561 - Gm23268 miRNA miRNA MGP_129S1SvImJ_T0070155.1 MGP_129S1SvImJ_G0029287.1 mouse_genomes_project 5 5781306 5836512 + MGP_129S1SvImJ_P0070155 Abcb1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070156.1 MGP_129S1SvImJ_G0029287.1 mouse_genomes_project 5 5781312 5800364 + MGP_129S1SvImJ_P0070156 Abcb1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070157.1 MGP_129S1SvImJ_G0029287.1 mouse_genomes_project 5 5781345 5854152 + MGP_129S1SvImJ_P0070157 Abcb1b protein_coding protein_coding MGP_129S1SvImJ_T0070158.1 MGP_129S1SvImJ_G0029287.1 mouse_genomes_project 5 5812065 5814535 + Abcb1b protein_coding retained_intron MGP_129S1SvImJ_T0070159.1 MGP_129S1SvImJ_G0029287.1 mouse_genomes_project 5 5827162 5840296 + Abcb1b protein_coding processed_transcript MGP_129S1SvImJ_T0070160.1 MGP_129S1SvImJ_G0029287.1 mouse_genomes_project 5 5838056 5840455 + Abcb1b protein_coding retained_intron MGP_129S1SvImJ_T0070161.1 MGP_129S1SvImJ_G0029287.1 mouse_genomes_project 5 5838261 5853772 + MGP_129S1SvImJ_P0070161 Abcb1b protein_coding protein_coding MGP_129S1SvImJ_T0070162.1 MGP_129S1SvImJ_G0029287.1 mouse_genomes_project 5 5838529 5841555 + Abcb1b protein_coding retained_intron MGP_129S1SvImJ_T0018201.1 MGP_129S1SvImJ_G0015606.1 mouse_genomes_project 5 76503744 76514392 + 4930432L08Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0072063.1 MGP_129S1SvImJ_G0029616.1 mouse_genomes_project 5 72637359 72682116 - MGP_129S1SvImJ_P0072063 Txk protein_coding protein_coding MGP_129S1SvImJ_T0072064.1 MGP_129S1SvImJ_G0029616.1 mouse_genomes_project 5 72637359 72701302 - MGP_129S1SvImJ_P0072064 Txk protein_coding protein_coding MGP_129S1SvImJ_T0072065.1 MGP_129S1SvImJ_G0029616.1 mouse_genomes_project 5 72637359 72701306 - MGP_129S1SvImJ_P0072065 Txk protein_coding protein_coding MGP_129S1SvImJ_T0072066.1 MGP_129S1SvImJ_G0029616.1 mouse_genomes_project 5 72637361 72701302 - MGP_129S1SvImJ_P0072066 Txk protein_coding protein_coding MGP_129S1SvImJ_T0072067.1 MGP_129S1SvImJ_G0029616.1 mouse_genomes_project 5 72637367 72681420 - Txk protein_coding processed_transcript MGP_129S1SvImJ_T0072068.1 MGP_129S1SvImJ_G0029616.1 mouse_genomes_project 5 72637367 72681420 - Txk protein_coding processed_transcript MGP_129S1SvImJ_T0072069.1 MGP_129S1SvImJ_G0029616.1 mouse_genomes_project 5 72646407 72701303 - Txk protein_coding retained_intron MGP_129S1SvImJ_T0072070.1 MGP_129S1SvImJ_G0029616.1 mouse_genomes_project 5 72697089 72701299 - Txk protein_coding retained_intron MGP_129S1SvImJ_T0072551.1 MGP_129S1SvImJ_G0029723.1 mouse_genomes_project 5 91602279 91628298 + MGP_129S1SvImJ_P0072551 Afm protein_coding protein_coding MGP_129S1SvImJ_T0072552.1 MGP_129S1SvImJ_G0029723.1 mouse_genomes_project 5 91602296 91623808 + MGP_129S1SvImJ_P0072552 Afm protein_coding protein_coding MGP_129S1SvImJ_T0001896.1 MGP_129S1SvImJ_G0001810.1 mouse_genomes_project 5 138547794 138549158 + TEC TEC MGP_129S1SvImJ_T0001897.1 MGP_129S1SvImJ_G0001810.1 mouse_genomes_project 5 138547806 138548405 + TEC TEC MGP_129S1SvImJ_T0001696.1 MGP_129S1SvImJ_G0001612.1 mouse_genomes_project 5 69105301 69107372 - TEC TEC MGP_129S1SvImJ_T0075987.1 MGP_129S1SvImJ_G0030397.1 mouse_genomes_project 5 154649907 154711390 - MGP_129S1SvImJ_P0075987 Katnal1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0075988.1 MGP_129S1SvImJ_G0030397.1 mouse_genomes_project 5 154649914 154711395 - MGP_129S1SvImJ_P0075988 Katnal1 protein_coding protein_coding MGP_129S1SvImJ_T0075989.1 MGP_129S1SvImJ_G0030397.1 mouse_genomes_project 5 154654013 154657352 - Katnal1 protein_coding retained_intron MGP_129S1SvImJ_T0075990.1 MGP_129S1SvImJ_G0030397.1 mouse_genomes_project 5 154665942 154711748 - Katnal1 protein_coding processed_transcript MGP_129S1SvImJ_T0075991.1 MGP_129S1SvImJ_G0030397.1 mouse_genomes_project 5 154673915 154712068 - MGP_129S1SvImJ_P0075991 Katnal1 protein_coding protein_coding MGP_129S1SvImJ_T0075993.1 MGP_129S1SvImJ_G0030397.1 mouse_genomes_project 5 154684654 154711376 - MGP_129S1SvImJ_P0075993 Katnal1 protein_coding protein_coding MGP_129S1SvImJ_T0075994.1 MGP_129S1SvImJ_G0030397.1 mouse_genomes_project 5 154707368 154711413 - Katnal1 protein_coding processed_transcript MGP_129S1SvImJ_T0001527.1 MGP_129S1SvImJ_G0001445.1 mouse_genomes_project 5 32726333 32728753 + TEC TEC MGP_129S1SvImJ_T0010756.1 MGP_129S1SvImJ_G0008872.1 mouse_genomes_project 5 146222167 146222246 + Gm26113 miRNA miRNA MGP_129S1SvImJ_T0073722.1 MGP_129S1SvImJ_G0029974.1 mouse_genomes_project 5 118466563 118527952 + MGP_129S1SvImJ_P0073722 Gcn1l1 protein_coding protein_coding MGP_129S1SvImJ_T0073723.1 MGP_129S1SvImJ_G0029974.1 mouse_genomes_project 5 118466581 118489454 + Gcn1l1 protein_coding retained_intron MGP_129S1SvImJ_T0073724.1 MGP_129S1SvImJ_G0029974.1 mouse_genomes_project 5 118466583 118486499 + Gcn1l1 protein_coding retained_intron MGP_129S1SvImJ_T0073725.1 MGP_129S1SvImJ_G0029974.1 mouse_genomes_project 5 118466585 118489975 + Gcn1l1 protein_coding retained_intron MGP_129S1SvImJ_T0073726.1 MGP_129S1SvImJ_G0029974.1 mouse_genomes_project 5 118466612 118468530 + Gcn1l1 protein_coding retained_intron MGP_129S1SvImJ_T0073727.1 MGP_129S1SvImJ_G0029974.1 mouse_genomes_project 5 118510973 118527946 + Gcn1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0073728.1 MGP_129S1SvImJ_G0029974.1 mouse_genomes_project 5 118515107 118515874 + Gcn1l1 protein_coding retained_intron MGP_129S1SvImJ_T0073729.1 MGP_129S1SvImJ_G0029974.1 mouse_genomes_project 5 118517090 118518686 + Gcn1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0073730.1 MGP_129S1SvImJ_G0029974.1 mouse_genomes_project 5 118520168 118521316 + Gcn1l1 protein_coding retained_intron MGP_129S1SvImJ_T0014973.1 MGP_129S1SvImJ_G0013062.1 mouse_genomes_project 5 37787541 37787998 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073833.1 MGP_129S1SvImJ_G0029992.1 mouse_genomes_project 5 121167532 121209024 + MGP_129S1SvImJ_P0073833 Tesc protein_coding protein_coding MGP_129S1SvImJ_T0073834.1 MGP_129S1SvImJ_G0029992.1 mouse_genomes_project 5 121167554 121208991 + MGP_129S1SvImJ_P0073834 Tesc protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073835.1 MGP_129S1SvImJ_G0029992.1 mouse_genomes_project 5 121167659 121209016 + Tesc protein_coding retained_intron MGP_129S1SvImJ_T0073836.1 MGP_129S1SvImJ_G0029992.1 mouse_genomes_project 5 121178684 121208919 + Tesc protein_coding processed_transcript MGP_129S1SvImJ_T0073837.1 MGP_129S1SvImJ_G0029992.1 mouse_genomes_project 5 121183604 121200825 + Tesc protein_coding processed_transcript MGP_129S1SvImJ_T0073838.1 MGP_129S1SvImJ_G0029992.1 mouse_genomes_project 5 121183605 121189575 + Tesc protein_coding processed_transcript MGP_129S1SvImJ_T0073041.1 MGP_129S1SvImJ_G0029836.1 mouse_genomes_project 5 109433610 109446236 + MGP_129S1SvImJ_P0073041 Ephx4 protein_coding protein_coding MGP_129S1SvImJ_T0073042.1 MGP_129S1SvImJ_G0029836.1 mouse_genomes_project 5 109434368 109462645 + MGP_129S1SvImJ_P0073042 Ephx4 protein_coding protein_coding MGP_129S1SvImJ_T0073043.1 MGP_129S1SvImJ_G0029836.1 mouse_genomes_project 5 109434647 109446144 + MGP_129S1SvImJ_P0073043 Ephx4 protein_coding protein_coding MGP_129S1SvImJ_T0073044.1 MGP_129S1SvImJ_G0029836.1 mouse_genomes_project 5 109436657 109446204 + MGP_129S1SvImJ_P0073044 Ephx4 protein_coding protein_coding MGP_129S1SvImJ_T0075453.1 MGP_129S1SvImJ_G0030280.1 mouse_genomes_project 5 144304073 144314521 - MGP_129S1SvImJ_P0075453 Cox19 protein_coding protein_coding MGP_129S1SvImJ_T0075454.1 MGP_129S1SvImJ_G0030280.1 mouse_genomes_project 5 144305702 144314465 - Cox19 protein_coding processed_transcript MGP_129S1SvImJ_T0075455.1 MGP_129S1SvImJ_G0030280.1 mouse_genomes_project 5 144306020 144307456 - Cox19 protein_coding processed_transcript MGP_129S1SvImJ_T0075456.1 MGP_129S1SvImJ_G0030280.1 mouse_genomes_project 5 144306101 144322529 - MGP_129S1SvImJ_P0075456 Cox19 protein_coding protein_coding MGP_129S1SvImJ_T0075457.1 MGP_129S1SvImJ_G0030280.1 mouse_genomes_project 5 144306190 144314413 - MGP_129S1SvImJ_P0075457 Cox19 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075458.1 MGP_129S1SvImJ_G0030280.1 mouse_genomes_project 5 144311306 144314448 - Cox19 protein_coding retained_intron MGP_129S1SvImJ_T0075459.1 MGP_129S1SvImJ_G0030280.1 mouse_genomes_project 5 144311475 144314453 - Cox19 protein_coding retained_intron MGP_129S1SvImJ_T0004675.1 MGP_129S1SvImJ_G0004052.1 mouse_genomes_project 5 29503699 29505019 - 4930566F21Rik antisense antisense MGP_129S1SvImJ_T0004676.1 MGP_129S1SvImJ_G0004052.1 mouse_genomes_project 5 29503703 29515760 - 4930566F21Rik antisense antisense MGP_129S1SvImJ_T0101715.1 MGP_129S1SvImJ_G0039720.1 mouse_genomes_project 5 31308552 31309714 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101716.1 MGP_129S1SvImJ_G0039720.1 mouse_genomes_project 5 31309239 31310026 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0071926.1 MGP_129S1SvImJ_G0029590.1 mouse_genomes_project 5 66416990 66429506 + MGP_129S1SvImJ_P0071926 Uchl1 protein_coding protein_coding MGP_129S1SvImJ_T0071927.1 MGP_129S1SvImJ_G0029590.1 mouse_genomes_project 5 66417141 66417747 + Uchl1 protein_coding retained_intron MGP_129S1SvImJ_T0071928.1 MGP_129S1SvImJ_G0029590.1 mouse_genomes_project 5 66417793 66429501 + Uchl1 protein_coding retained_intron MGP_129S1SvImJ_T0071929.1 MGP_129S1SvImJ_G0029590.1 mouse_genomes_project 5 66425959 66429210 + Uchl1 protein_coding retained_intron MGP_129S1SvImJ_T0072793.1 MGP_129S1SvImJ_G0029782.1 mouse_genomes_project 5 101484255 101486747 - Hnrnpdl protein_coding processed_transcript MGP_129S1SvImJ_T0072794.1 MGP_129S1SvImJ_G0029782.1 mouse_genomes_project 5 101484255 101489893 - MGP_129S1SvImJ_P0072794 Hnrnpdl protein_coding protein_coding MGP_129S1SvImJ_T0072795.1 MGP_129S1SvImJ_G0029782.1 mouse_genomes_project 5 101485399 101489540 - MGP_129S1SvImJ_P0072795 Hnrnpdl protein_coding protein_coding MGP_129S1SvImJ_T0072796.1 MGP_129S1SvImJ_G0029782.1 mouse_genomes_project 5 101485405 101490335 - MGP_129S1SvImJ_P0072796 Hnrnpdl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072797.1 MGP_129S1SvImJ_G0029782.1 mouse_genomes_project 5 101485506 101487404 - Hnrnpdl protein_coding retained_intron MGP_129S1SvImJ_T0072798.1 MGP_129S1SvImJ_G0029782.1 mouse_genomes_project 5 101486104 101489566 - MGP_129S1SvImJ_P0072798 Hnrnpdl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072799.1 MGP_129S1SvImJ_G0029782.1 mouse_genomes_project 5 101486638 101487800 - Hnrnpdl protein_coding retained_intron MGP_129S1SvImJ_T0001466.1 MGP_129S1SvImJ_G0001387.1 mouse_genomes_project 5 7867813 7871152 - TEC TEC MGP_129S1SvImJ_T0074272.1 MGP_129S1SvImJ_G0030070.1 mouse_genomes_project 5 127134788 127186077 + MGP_129S1SvImJ_P0074272 Mlxip protein_coding protein_coding MGP_129S1SvImJ_T0074273.1 MGP_129S1SvImJ_G0030070.1 mouse_genomes_project 5 127134790 127197085 + MGP_129S1SvImJ_P0074273 Mlxip protein_coding protein_coding MGP_129S1SvImJ_T0074274.1 MGP_129S1SvImJ_G0030070.1 mouse_genomes_project 5 127185097 127197082 + MGP_129S1SvImJ_P0074274 Mlxip protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074275.1 MGP_129S1SvImJ_G0030070.1 mouse_genomes_project 5 127190626 127192718 + Mlxip protein_coding processed_transcript MGP_129S1SvImJ_T0001471.1 MGP_129S1SvImJ_G0001392.1 mouse_genomes_project 5 10759447 10762131 + TEC TEC MGP_129S1SvImJ_T0004714.1 MGP_129S1SvImJ_G0004082.1 mouse_genomes_project 5 52060721 52062223 - Gm17182 antisense antisense MGP_129S1SvImJ_T0001754.1 MGP_129S1SvImJ_G0001669.1 mouse_genomes_project 5 103391673 103393273 + TEC TEC MGP_129S1SvImJ_T0072085.1 MGP_129S1SvImJ_G0029619.1 mouse_genomes_project 5 72933411 72942307 - MGP_129S1SvImJ_P0072085 Gm10135 protein_coding protein_coding MGP_129S1SvImJ_T0015224.1 MGP_129S1SvImJ_G0013313.1 mouse_genomes_project 5 151168473 151170257 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008226.1 MGP_129S1SvImJ_G0006709.1 mouse_genomes_project 5 99920460 99934193 - 1700010H22Rik lincRNA lincRNA MGP_129S1SvImJ_T0008227.1 MGP_129S1SvImJ_G0006709.1 mouse_genomes_project 5 99930039 99934271 - 1700010H22Rik lincRNA lincRNA MGP_129S1SvImJ_T0008228.1 MGP_129S1SvImJ_G0006709.1 mouse_genomes_project 5 99931455 99934029 - 1700010H22Rik lincRNA lincRNA MGP_129S1SvImJ_T0004911.1 MGP_129S1SvImJ_G0004221.1 mouse_genomes_project 5 154733562 154737188 - Gm15410 antisense antisense MGP_129S1SvImJ_T0075918.1 MGP_129S1SvImJ_G0030385.1 mouse_genomes_project 5 152826960 152829197 + MGP_129S1SvImJ_P0075918 Gsx1 protein_coding protein_coding MGP_129S1SvImJ_T0074027.1 MGP_129S1SvImJ_G0030037.1 mouse_genomes_project 5 125269457 125386922 + MGP_129S1SvImJ_P0074027 Atxn2 protein_coding protein_coding MGP_129S1SvImJ_T0074028.1 MGP_129S1SvImJ_G0030037.1 mouse_genomes_project 5 125270569 125315197 + Atxn2 protein_coding processed_transcript MGP_129S1SvImJ_T0074029.1 MGP_129S1SvImJ_G0030037.1 mouse_genomes_project 5 125310975 125343586 + Atxn2 protein_coding processed_transcript MGP_129S1SvImJ_T0074030.1 MGP_129S1SvImJ_G0030037.1 mouse_genomes_project 5 125315209 125386921 + MGP_129S1SvImJ_P0074030 Atxn2 protein_coding protein_coding MGP_129S1SvImJ_T0074031.1 MGP_129S1SvImJ_G0030037.1 mouse_genomes_project 5 125348723 125365783 + MGP_129S1SvImJ_P0074031 Atxn2 protein_coding protein_coding MGP_129S1SvImJ_T0074032.1 MGP_129S1SvImJ_G0030037.1 mouse_genomes_project 5 125350984 125354118 + Atxn2 protein_coding retained_intron MGP_129S1SvImJ_T0074033.1 MGP_129S1SvImJ_G0030037.1 mouse_genomes_project 5 125354702 125386693 + MGP_129S1SvImJ_P0074033 Atxn2 protein_coding protein_coding MGP_129S1SvImJ_T0074034.1 MGP_129S1SvImJ_G0030037.1 mouse_genomes_project 5 125355869 125366194 + Atxn2 protein_coding retained_intron MGP_129S1SvImJ_T0074035.1 MGP_129S1SvImJ_G0030037.1 mouse_genomes_project 5 125368134 125375408 + Atxn2 protein_coding retained_intron MGP_129S1SvImJ_T0074036.1 MGP_129S1SvImJ_G0030037.1 mouse_genomes_project 5 125373281 125374238 + Atxn2 protein_coding processed_transcript MGP_129S1SvImJ_T0074037.1 MGP_129S1SvImJ_G0030037.1 mouse_genomes_project 5 125373718 125382924 + Atxn2 protein_coding retained_intron MGP_129S1SvImJ_T0074038.1 MGP_129S1SvImJ_G0030037.1 mouse_genomes_project 5 125374083 125381029 + Atxn2 protein_coding retained_intron MGP_129S1SvImJ_T0074039.1 MGP_129S1SvImJ_G0030037.1 mouse_genomes_project 5 125374202 125386604 + MGP_129S1SvImJ_P0074039 Atxn2 protein_coding protein_coding MGP_129S1SvImJ_T0074040.1 MGP_129S1SvImJ_G0030037.1 mouse_genomes_project 5 125377551 125386706 + Atxn2 protein_coding retained_intron MGP_129S1SvImJ_T0074041.1 MGP_129S1SvImJ_G0030037.1 mouse_genomes_project 5 125378217 125385428 + MGP_129S1SvImJ_P0074041 Atxn2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074042.1 MGP_129S1SvImJ_G0030037.1 mouse_genomes_project 5 125382636 125383506 + Atxn2 protein_coding retained_intron MGP_129S1SvImJ_T0074043.1 MGP_129S1SvImJ_G0030037.1 mouse_genomes_project 5 125382937 125383903 + Atxn2 protein_coding retained_intron MGP_129S1SvImJ_T0074044.1 MGP_129S1SvImJ_G0030037.1 mouse_genomes_project 5 125383432 125388465 + MGP_129S1SvImJ_P0074044 Atxn2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074045.1 MGP_129S1SvImJ_G0030037.1 mouse_genomes_project 5 125383479 125386870 + MGP_129S1SvImJ_P0074045 Atxn2 protein_coding protein_coding MGP_129S1SvImJ_T0073641.1 MGP_129S1SvImJ_G0029959.1 mouse_genomes_project 5 117978582 117995598 - MGP_129S1SvImJ_P0073641 Mlec protein_coding protein_coding MGP_129S1SvImJ_T0073642.1 MGP_129S1SvImJ_G0029959.1 mouse_genomes_project 5 117983709 117988482 - Mlec protein_coding processed_transcript MGP_129S1SvImJ_T0072441.1 MGP_129S1SvImJ_G0029691.1 mouse_genomes_project 5 88731762 88746374 + MGP_129S1SvImJ_P0072441 Csn1s2a protein_coding protein_coding MGP_129S1SvImJ_T0072442.1 MGP_129S1SvImJ_G0029691.1 mouse_genomes_project 5 88731762 88746374 + MGP_129S1SvImJ_P0072442 Csn1s2a protein_coding protein_coding MGP_129S1SvImJ_T0072443.1 MGP_129S1SvImJ_G0029691.1 mouse_genomes_project 5 88731762 88746275 + MGP_129S1SvImJ_P0072443 Csn1s2a protein_coding protein_coding MGP_129S1SvImJ_T0072444.1 MGP_129S1SvImJ_G0029691.1 mouse_genomes_project 5 88731776 88746275 + MGP_129S1SvImJ_P0072444 Csn1s2a protein_coding protein_coding MGP_129S1SvImJ_T0072445.1 MGP_129S1SvImJ_G0029691.1 mouse_genomes_project 5 88731777 88738206 + Csn1s2a protein_coding retained_intron MGP_129S1SvImJ_T0072446.1 MGP_129S1SvImJ_G0029691.1 mouse_genomes_project 5 88732979 88736427 + Csn1s2a protein_coding retained_intron MGP_129S1SvImJ_T0072447.1 MGP_129S1SvImJ_G0029691.1 mouse_genomes_project 5 88735084 88738018 + Csn1s2a protein_coding retained_intron MGP_129S1SvImJ_T0072448.1 MGP_129S1SvImJ_G0029691.1 mouse_genomes_project 5 88737227 88739477 + Csn1s2a protein_coding retained_intron MGP_129S1SvImJ_T0072449.1 MGP_129S1SvImJ_G0029691.1 mouse_genomes_project 5 88739447 88746353 + Csn1s2a protein_coding retained_intron MGP_129S1SvImJ_T0072450.1 MGP_129S1SvImJ_G0029691.1 mouse_genomes_project 5 88742751 88744688 + Csn1s2a protein_coding retained_intron MGP_129S1SvImJ_T0001630.1 MGP_129S1SvImJ_G0001547.1 mouse_genomes_project 5 57232432 57233787 + TEC TEC MGP_129S1SvImJ_T0070215.1 MGP_129S1SvImJ_G0029296.1 mouse_genomes_project 5 11277831 11511467 + Sema3e protein_coding retained_intron MGP_129S1SvImJ_T0070216.1 MGP_129S1SvImJ_G0029296.1 mouse_genomes_project 5 11277831 11513857 + MGP_129S1SvImJ_P0070216 Sema3e protein_coding protein_coding MGP_129S1SvImJ_T0070217.1 MGP_129S1SvImJ_G0029296.1 mouse_genomes_project 5 11486039 11487889 + Sema3e protein_coding retained_intron MGP_129S1SvImJ_T0014895.1 MGP_129S1SvImJ_G0012984.1 mouse_genomes_project 5 16963390 16965083 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075364.1 MGP_129S1SvImJ_G0030267.1 mouse_genomes_project 5 143123441 143129792 - MGP_129S1SvImJ_P0075364 Gpc2 protein_coding protein_coding MGP_129S1SvImJ_T0075365.1 MGP_129S1SvImJ_G0030267.1 mouse_genomes_project 5 143123443 143129772 - Gpc2 protein_coding retained_intron MGP_129S1SvImJ_T0075366.1 MGP_129S1SvImJ_G0030267.1 mouse_genomes_project 5 143123443 143129749 - Gpc2 protein_coding retained_intron MGP_129S1SvImJ_T0075367.1 MGP_129S1SvImJ_G0030267.1 mouse_genomes_project 5 143123443 143129769 - MGP_129S1SvImJ_P0075367 Gpc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075368.1 MGP_129S1SvImJ_G0030267.1 mouse_genomes_project 5 143123446 143129752 - MGP_129S1SvImJ_P0075368 Gpc2 protein_coding protein_coding MGP_129S1SvImJ_T0075369.1 MGP_129S1SvImJ_G0030267.1 mouse_genomes_project 5 143125314 143128024 - Gpc2 protein_coding retained_intron MGP_129S1SvImJ_T0075370.1 MGP_129S1SvImJ_G0030267.1 mouse_genomes_project 5 143126427 143129750 - Gpc2 protein_coding processed_transcript MGP_129S1SvImJ_T0070430.1 MGP_129S1SvImJ_G0029341.1 mouse_genomes_project 5 22139112 22143554 + MGP_129S1SvImJ_P0070430 Asic3 protein_coding protein_coding MGP_129S1SvImJ_T0070431.1 MGP_129S1SvImJ_G0029341.1 mouse_genomes_project 5 22139171 22143554 + Asic3 protein_coding retained_intron MGP_129S1SvImJ_T0070432.1 MGP_129S1SvImJ_G0029341.1 mouse_genomes_project 5 22139432 22143466 + MGP_129S1SvImJ_P0070432 Asic3 protein_coding protein_coding MGP_129S1SvImJ_T0070433.1 MGP_129S1SvImJ_G0029341.1 mouse_genomes_project 5 22141459 22143554 + Asic3 protein_coding retained_intron MGP_129S1SvImJ_T0070434.1 MGP_129S1SvImJ_G0029341.1 mouse_genomes_project 5 22142296 22143555 + MGP_129S1SvImJ_P0070434 Asic3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0001848.1 MGP_129S1SvImJ_G0001762.1 mouse_genomes_project 5 128361161 128362525 + TEC TEC MGP_129S1SvImJ_T0010700.1 MGP_129S1SvImJ_G0008816.1 mouse_genomes_project 5 63670530 63670608 - Gm23967 miRNA miRNA MGP_129S1SvImJ_T0014962.1 MGP_129S1SvImJ_G0013051.1 mouse_genomes_project 5 31972645 31972957 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0071261.1 MGP_129S1SvImJ_G0029478.1 mouse_genomes_project 5 33660582 33674324 + MGP_129S1SvImJ_P0071261 Hmx1 protein_coding protein_coding MGP_129S1SvImJ_T0071262.1 MGP_129S1SvImJ_G0029478.1 mouse_genomes_project 5 33660591 33664365 + MGP_129S1SvImJ_P0071262 Hmx1 protein_coding protein_coding MGP_129S1SvImJ_T0074120.1 MGP_129S1SvImJ_G0030050.1 mouse_genomes_project 5 126006998 126018834 + MGP_129S1SvImJ_P0074120 Gpn3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074121.1 MGP_129S1SvImJ_G0030050.1 mouse_genomes_project 5 126007573 126018895 + MGP_129S1SvImJ_P0074121 Gpn3 protein_coding protein_coding MGP_129S1SvImJ_T0074122.1 MGP_129S1SvImJ_G0030050.1 mouse_genomes_project 5 126007649 126014720 + Gpn3 protein_coding retained_intron MGP_129S1SvImJ_T0074123.1 MGP_129S1SvImJ_G0030050.1 mouse_genomes_project 5 126009106 126018292 + MGP_129S1SvImJ_P0074123 Gpn3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074124.1 MGP_129S1SvImJ_G0030050.1 mouse_genomes_project 5 126017260 126018895 + MGP_129S1SvImJ_P0074124 Gpn3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074125.1 MGP_129S1SvImJ_G0030050.1 mouse_genomes_project 5 126017285 126018525 + MGP_129S1SvImJ_P0074125 Gpn3 protein_coding protein_coding MGP_129S1SvImJ_T0001561.1 MGP_129S1SvImJ_G0001479.1 mouse_genomes_project 5 43343945 43350880 - TEC TEC MGP_129S1SvImJ_T0070716.1 MGP_129S1SvImJ_G0029398.1 mouse_genomes_project 5 28846485 28848999 + MGP_129S1SvImJ_P0070716 Agbl5 protein_coding protein_coding MGP_129S1SvImJ_T0070717.1 MGP_129S1SvImJ_G0029398.1 mouse_genomes_project 5 28846643 28854479 + MGP_129S1SvImJ_P0070717 Agbl5 protein_coding protein_coding MGP_129S1SvImJ_T0070718.1 MGP_129S1SvImJ_G0029398.1 mouse_genomes_project 5 28846726 28865721 + MGP_129S1SvImJ_P0070718 Agbl5 protein_coding protein_coding MGP_129S1SvImJ_T0070719.1 MGP_129S1SvImJ_G0029398.1 mouse_genomes_project 5 28846732 28851625 + Agbl5 protein_coding retained_intron MGP_129S1SvImJ_T0070720.1 MGP_129S1SvImJ_G0029398.1 mouse_genomes_project 5 28846747 28865423 + Agbl5 protein_coding retained_intron MGP_129S1SvImJ_T0070721.1 MGP_129S1SvImJ_G0029398.1 mouse_genomes_project 5 28846760 28853876 + Agbl5 protein_coding retained_intron MGP_129S1SvImJ_T0070722.1 MGP_129S1SvImJ_G0029398.1 mouse_genomes_project 5 28846760 28865422 + MGP_129S1SvImJ_P0070722 Agbl5 protein_coding protein_coding MGP_129S1SvImJ_T0070723.1 MGP_129S1SvImJ_G0029398.1 mouse_genomes_project 5 28846765 28862243 + MGP_129S1SvImJ_P0070723 Agbl5 protein_coding protein_coding MGP_129S1SvImJ_T0070724.1 MGP_129S1SvImJ_G0029398.1 mouse_genomes_project 5 28846792 28865422 + MGP_129S1SvImJ_P0070724 Agbl5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070725.1 MGP_129S1SvImJ_G0029398.1 mouse_genomes_project 5 28846797 28865422 + MGP_129S1SvImJ_P0070725 Agbl5 protein_coding protein_coding MGP_129S1SvImJ_T0070726.1 MGP_129S1SvImJ_G0029398.1 mouse_genomes_project 5 28846797 28862243 + MGP_129S1SvImJ_P0070726 Agbl5 protein_coding protein_coding MGP_129S1SvImJ_T0070727.1 MGP_129S1SvImJ_G0029398.1 mouse_genomes_project 5 28847117 28849661 + MGP_129S1SvImJ_P0070727 Agbl5 protein_coding protein_coding MGP_129S1SvImJ_T0070728.1 MGP_129S1SvImJ_G0029398.1 mouse_genomes_project 5 28848073 28850239 + Agbl5 protein_coding processed_transcript MGP_129S1SvImJ_T0070729.1 MGP_129S1SvImJ_G0029398.1 mouse_genomes_project 5 28851995 28853886 + Agbl5 protein_coding retained_intron MGP_129S1SvImJ_T0070731.1 MGP_129S1SvImJ_G0029398.1 mouse_genomes_project 5 28852930 28853907 + Agbl5 protein_coding retained_intron MGP_129S1SvImJ_T0070732.1 MGP_129S1SvImJ_G0029398.1 mouse_genomes_project 5 28853724 28864666 + MGP_129S1SvImJ_P0070732 Agbl5 protein_coding protein_coding MGP_129S1SvImJ_T0073372.1 MGP_129S1SvImJ_G0029905.1 mouse_genomes_project 5 114919914 114955273 + MGP_129S1SvImJ_P0073372 Hps4 protein_coding protein_coding MGP_129S1SvImJ_T0073373.1 MGP_129S1SvImJ_G0029905.1 mouse_genomes_project 5 114919924 114921579 + Hps4 protein_coding processed_transcript MGP_129S1SvImJ_T0073374.1 MGP_129S1SvImJ_G0029905.1 mouse_genomes_project 5 114919926 114955273 + Hps4 protein_coding retained_intron MGP_129S1SvImJ_T0073375.1 MGP_129S1SvImJ_G0029905.1 mouse_genomes_project 5 114919926 114955273 + MGP_129S1SvImJ_P0073375 Hps4 protein_coding protein_coding MGP_129S1SvImJ_T0073376.1 MGP_129S1SvImJ_G0029905.1 mouse_genomes_project 5 114919931 114921719 + Hps4 protein_coding processed_transcript MGP_129S1SvImJ_T0073378.1 MGP_129S1SvImJ_G0029905.1 mouse_genomes_project 5 114945599 114946629 + Hps4 protein_coding retained_intron MGP_129S1SvImJ_T0073379.1 MGP_129S1SvImJ_G0029905.1 mouse_genomes_project 5 114952196 114955260 + Hps4 protein_coding retained_intron MGP_129S1SvImJ_T0001553.1 MGP_129S1SvImJ_G0001471.1 mouse_genomes_project 5 42865971 42866786 + TEC TEC MGP_129S1SvImJ_T0001708.1 MGP_129S1SvImJ_G0001623.1 mouse_genomes_project 5 73301516 73302035 - TEC TEC MGP_129S1SvImJ_T0076110.1 MGP_129S1SvImJ_G0030416.1 mouse_genomes_project 5 157045528 157437117 - MGP_129S1SvImJ_P0076110 Gm42906 protein_coding protein_coding MGP_129S1SvImJ_T0015089.1 MGP_129S1SvImJ_G0013178.1 mouse_genomes_project 5 92871980 92872860 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004898.1 MGP_129S1SvImJ_G0004213.1 mouse_genomes_project 5 146536185 146543931 - Gm16035 antisense antisense MGP_129S1SvImJ_T0075441.1 MGP_129S1SvImJ_G0030278.1 mouse_genomes_project 5 144209222 144226940 + MGP_129S1SvImJ_P0075441 Get4 protein_coding protein_coding MGP_129S1SvImJ_T0075442.1 MGP_129S1SvImJ_G0030278.1 mouse_genomes_project 5 144209268 144224030 + MGP_129S1SvImJ_P0075442 Get4 protein_coding protein_coding MGP_129S1SvImJ_T0075443.1 MGP_129S1SvImJ_G0030278.1 mouse_genomes_project 5 144210395 144224123 + MGP_129S1SvImJ_P0075443 Get4 protein_coding protein_coding MGP_129S1SvImJ_T0075444.1 MGP_129S1SvImJ_G0030278.1 mouse_genomes_project 5 144210409 144226218 + MGP_129S1SvImJ_P0075444 Get4 protein_coding protein_coding MGP_129S1SvImJ_T0075445.1 MGP_129S1SvImJ_G0030278.1 mouse_genomes_project 5 144223755 144224327 + Get4 protein_coding retained_intron MGP_129S1SvImJ_T0075446.1 MGP_129S1SvImJ_G0030278.1 mouse_genomes_project 5 144223819 144226591 + Get4 protein_coding retained_intron MGP_129S1SvImJ_T0010701.1 MGP_129S1SvImJ_G0008817.1 mouse_genomes_project 5 63679034 63679130 - Gm22395 miRNA miRNA MGP_129S1SvImJ_T0073940.1 MGP_129S1SvImJ_G0030020.1 mouse_genomes_project 5 124344346 124353682 + MGP_129S1SvImJ_P0073940 Oas1d protein_coding protein_coding MGP_129S1SvImJ_T0075921.1 MGP_129S1SvImJ_G0030388.1 mouse_genomes_project 5 152961770 152969189 - MGP_129S1SvImJ_P0075921 Urad protein_coding protein_coding MGP_129S1SvImJ_T0015167.1 MGP_129S1SvImJ_G0013256.1 mouse_genomes_project 5 124958262 124959084 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070438.1 MGP_129S1SvImJ_G0029343.1 mouse_genomes_project 5 22149556 22153332 + MGP_129S1SvImJ_P0070438 Slc4a2 protein_coding protein_coding MGP_129S1SvImJ_T0070439.1 MGP_129S1SvImJ_G0029343.1 mouse_genomes_project 5 22149572 22155873 + Slc4a2 protein_coding processed_transcript MGP_129S1SvImJ_T0070440.1 MGP_129S1SvImJ_G0029343.1 mouse_genomes_project 5 22149578 22155606 + MGP_129S1SvImJ_P0070440 Slc4a2 protein_coding protein_coding MGP_129S1SvImJ_T0070441.1 MGP_129S1SvImJ_G0029343.1 mouse_genomes_project 5 22150951 22168617 + MGP_129S1SvImJ_P0070441 Slc4a2 protein_coding protein_coding MGP_129S1SvImJ_T0070442.1 MGP_129S1SvImJ_G0029343.1 mouse_genomes_project 5 22150995 22153309 + Slc4a2 protein_coding processed_transcript MGP_129S1SvImJ_T0070443.1 MGP_129S1SvImJ_G0029343.1 mouse_genomes_project 5 22151004 22153423 + Slc4a2 protein_coding processed_transcript MGP_129S1SvImJ_T0070444.1 MGP_129S1SvImJ_G0029343.1 mouse_genomes_project 5 22152550 22155576 + MGP_129S1SvImJ_P0070444 Slc4a2 protein_coding protein_coding MGP_129S1SvImJ_T0070445.1 MGP_129S1SvImJ_G0029343.1 mouse_genomes_project 5 22153931 22168614 + MGP_129S1SvImJ_P0070445 Slc4a2 protein_coding protein_coding MGP_129S1SvImJ_T0070446.1 MGP_129S1SvImJ_G0029343.1 mouse_genomes_project 5 22153986 22155562 + Slc4a2 protein_coding processed_transcript MGP_129S1SvImJ_T0070447.1 MGP_129S1SvImJ_G0029343.1 mouse_genomes_project 5 22154146 22168614 + MGP_129S1SvImJ_P0070447 Slc4a2 protein_coding protein_coding MGP_129S1SvImJ_T0070448.1 MGP_129S1SvImJ_G0029343.1 mouse_genomes_project 5 22154741 22155503 + Slc4a2 protein_coding retained_intron MGP_129S1SvImJ_T0070449.1 MGP_129S1SvImJ_G0029343.1 mouse_genomes_project 5 22157059 22160076 + Slc4a2 protein_coding retained_intron MGP_129S1SvImJ_T0070450.1 MGP_129S1SvImJ_G0029343.1 mouse_genomes_project 5 22161268 22162211 + Slc4a2 protein_coding retained_intron MGP_129S1SvImJ_T0070451.1 MGP_129S1SvImJ_G0029343.1 mouse_genomes_project 5 22162483 22166923 + Slc4a2 protein_coding retained_intron MGP_129S1SvImJ_T0070454.1 MGP_129S1SvImJ_G0029343.1 mouse_genomes_project 5 22167412 22168239 + Slc4a2 protein_coding retained_intron MGP_129S1SvImJ_T0073147.1 MGP_129S1SvImJ_G0029859.1 mouse_genomes_project 5 110691825 110713938 - MGP_129S1SvImJ_P0073147 Gak protein_coding protein_coding MGP_129S1SvImJ_T0073148.1 MGP_129S1SvImJ_G0029859.1 mouse_genomes_project 5 110691828 110758976 - MGP_129S1SvImJ_P0073148 Gak protein_coding protein_coding MGP_129S1SvImJ_T0073149.1 MGP_129S1SvImJ_G0029859.1 mouse_genomes_project 5 110691828 110758976 - MGP_129S1SvImJ_P0073149 Gak protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073150.1 MGP_129S1SvImJ_G0029859.1 mouse_genomes_project 5 110691834 110758976 - MGP_129S1SvImJ_P0073150 Gak protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073151.1 MGP_129S1SvImJ_G0029859.1 mouse_genomes_project 5 110692587 110694280 - Gak protein_coding retained_intron MGP_129S1SvImJ_T0073152.1 MGP_129S1SvImJ_G0029859.1 mouse_genomes_project 5 110693845 110758992 - MGP_129S1SvImJ_P0073152 Gak protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073153.1 MGP_129S1SvImJ_G0029859.1 mouse_genomes_project 5 110694385 110699653 - Gak protein_coding processed_transcript MGP_129S1SvImJ_T0073154.1 MGP_129S1SvImJ_G0029859.1 mouse_genomes_project 5 110699309 110703366 - Gak protein_coding retained_intron MGP_129S1SvImJ_T0073155.1 MGP_129S1SvImJ_G0029859.1 mouse_genomes_project 5 110702486 110754331 - Gak protein_coding retained_intron MGP_129S1SvImJ_T0073156.1 MGP_129S1SvImJ_G0029859.1 mouse_genomes_project 5 110705503 110713974 - MGP_129S1SvImJ_P0073156 Gak protein_coding protein_coding MGP_129S1SvImJ_T0073157.1 MGP_129S1SvImJ_G0029859.1 mouse_genomes_project 5 110706779 110720605 - MGP_129S1SvImJ_P0073157 Gak protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073158.1 MGP_129S1SvImJ_G0029859.1 mouse_genomes_project 5 110741544 110758660 - Gak protein_coding processed_transcript MGP_129S1SvImJ_T0073159.1 MGP_129S1SvImJ_G0029859.1 mouse_genomes_project 5 110752548 110758930 - MGP_129S1SvImJ_P0073159 Gak protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0001858.1 MGP_129S1SvImJ_G0001772.1 mouse_genomes_project 5 132624560 132625935 - TEC TEC MGP_129S1SvImJ_T0072964.1 MGP_129S1SvImJ_G0029820.1 mouse_genomes_project 5 106783398 107031166 - Gbp8 protein_coding processed_transcript MGP_129S1SvImJ_T0072965.1 MGP_129S1SvImJ_G0029820.1 mouse_genomes_project 5 106783401 106812526 - MGP_129S1SvImJ_P0072965 Gbp8 protein_coding protein_coding MGP_129S1SvImJ_T0072966.1 MGP_129S1SvImJ_G0029820.1 mouse_genomes_project 5 106784146 106812561 - MGP_129S1SvImJ_P0072966 Gbp8 protein_coding protein_coding MGP_129S1SvImJ_T0099901.1 MGP_129S1SvImJ_G0037968.1 mouse_genomes_project 5 17579933 17580037 + Gm23570 snRNA snRNA MGP_129S1SvImJ_T0001483.1 MGP_129S1SvImJ_G0001404.1 mouse_genomes_project 5 13114136 13115315 + TEC TEC MGP_129S1SvImJ_T0075691.1 MGP_129S1SvImJ_G0030334.1 mouse_genomes_project 5 148891232 148913737 + MGP_129S1SvImJ_P0075691 protein_coding protein_coding MGP_129S1SvImJ_T0075692.1 MGP_129S1SvImJ_G0030334.1 mouse_genomes_project 5 148891232 148913737 + MGP_129S1SvImJ_P0075692 protein_coding protein_coding MGP_129S1SvImJ_T0075693.1 MGP_129S1SvImJ_G0030334.1 mouse_genomes_project 5 148891234 148913743 + MGP_129S1SvImJ_P0075693 protein_coding protein_coding MGP_129S1SvImJ_T0075694.1 MGP_129S1SvImJ_G0030334.1 mouse_genomes_project 5 148891234 148913743 + MGP_129S1SvImJ_P0075694 protein_coding protein_coding MGP_129S1SvImJ_T0075695.1 MGP_129S1SvImJ_G0030334.1 mouse_genomes_project 5 148891272 148894461 + MGP_129S1SvImJ_P0075695 protein_coding protein_coding MGP_129S1SvImJ_T0075696.1 MGP_129S1SvImJ_G0030334.1 mouse_genomes_project 5 148891287 148913737 + MGP_129S1SvImJ_P0075696 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075697.1 MGP_129S1SvImJ_G0030334.1 mouse_genomes_project 5 148891287 148913739 + MGP_129S1SvImJ_P0075697 protein_coding protein_coding MGP_129S1SvImJ_T0075698.1 MGP_129S1SvImJ_G0030334.1 mouse_genomes_project 5 148891288 148893402 + protein_coding retained_intron MGP_129S1SvImJ_T0075699.1 MGP_129S1SvImJ_G0030334.1 mouse_genomes_project 5 148891566 148894456 + protein_coding processed_transcript MGP_129S1SvImJ_T0014998.1 MGP_129S1SvImJ_G0013087.1 mouse_genomes_project 5 54136240 54137069 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070545.1 MGP_129S1SvImJ_G0029363.1 mouse_genomes_project 5 23515314 23532671 - MGP_129S1SvImJ_P0070545 Xrcc2 protein_coding protein_coding MGP_129S1SvImJ_T0070546.1 MGP_129S1SvImJ_G0029363.1 mouse_genomes_project 5 23517554 23518942 - Xrcc2 protein_coding processed_transcript MGP_129S1SvImJ_T0070547.1 MGP_129S1SvImJ_G0029363.1 mouse_genomes_project 5 23522835 23532619 - MGP_129S1SvImJ_P0070547 Xrcc2 protein_coding protein_coding MGP_129S1SvImJ_T0070548.1 MGP_129S1SvImJ_G0029363.1 mouse_genomes_project 5 23523592 23532610 - Xrcc2 protein_coding retained_intron MGP_129S1SvImJ_T0072467.1 MGP_129S1SvImJ_G0029697.1 mouse_genomes_project 5 88948503 88987696 + MGP_129S1SvImJ_P0072467 Gm28434 protein_coding protein_coding MGP_129S1SvImJ_T0070922.1 MGP_129S1SvImJ_G0029428.1 mouse_genomes_project 5 29536317 29549024 - MGP_129S1SvImJ_P0070922 Supt7l protein_coding protein_coding MGP_129S1SvImJ_T0070923.1 MGP_129S1SvImJ_G0029428.1 mouse_genomes_project 5 29538257 29549040 - MGP_129S1SvImJ_P0070923 Supt7l protein_coding protein_coding MGP_129S1SvImJ_T0070924.1 MGP_129S1SvImJ_G0029428.1 mouse_genomes_project 5 29543800 29550116 - Supt7l protein_coding retained_intron MGP_129S1SvImJ_T0070925.1 MGP_129S1SvImJ_G0029428.1 mouse_genomes_project 5 29547771 29549011 - Supt7l protein_coding retained_intron MGP_129S1SvImJ_T0075825.1 MGP_129S1SvImJ_G0030360.1 mouse_genomes_project 5 150593596 150608447 + MGP_129S1SvImJ_P0075825 Cpsf4 protein_coding protein_coding MGP_129S1SvImJ_T0075826.1 MGP_129S1SvImJ_G0030360.1 mouse_genomes_project 5 150593607 150608447 + MGP_129S1SvImJ_P0075826 Cpsf4 protein_coding protein_coding MGP_129S1SvImJ_T0075827.1 MGP_129S1SvImJ_G0030360.1 mouse_genomes_project 5 150593630 150608446 + MGP_129S1SvImJ_P0075827 Cpsf4 protein_coding protein_coding MGP_129S1SvImJ_T0075828.1 MGP_129S1SvImJ_G0030360.1 mouse_genomes_project 5 150593637 150608159 + MGP_129S1SvImJ_P0075828 Cpsf4 protein_coding protein_coding MGP_129S1SvImJ_T0075829.1 MGP_129S1SvImJ_G0030360.1 mouse_genomes_project 5 150593654 150607638 + MGP_129S1SvImJ_P0075829 Cpsf4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075830.1 MGP_129S1SvImJ_G0030360.1 mouse_genomes_project 5 150593841 150607759 + MGP_129S1SvImJ_P0075830 Cpsf4 protein_coding protein_coding MGP_129S1SvImJ_T0075831.1 MGP_129S1SvImJ_G0030360.1 mouse_genomes_project 5 150596916 150608447 + Cpsf4 protein_coding retained_intron MGP_129S1SvImJ_T0015129.1 MGP_129S1SvImJ_G0013218.1 mouse_genomes_project 5 109515993 109516548 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004744.1 MGP_129S1SvImJ_G0004108.1 mouse_genomes_project 5 87576241 87608050 + Gm16579 antisense antisense MGP_129S1SvImJ_T0001871.1 MGP_129S1SvImJ_G0001785.1 mouse_genomes_project 5 135845923 135847674 - TEC TEC MGP_129S1SvImJ_T0076116.1 MGP_129S1SvImJ_G0030417.1 mouse_genomes_project 5 157548916 157576559 - MGP_129S1SvImJ_P0076116 Vmn2r18 protein_coding protein_coding MGP_129S1SvImJ_T0074005.1 MGP_129S1SvImJ_G0030033.1 mouse_genomes_project 5 125066115 125098221 - MGP_129S1SvImJ_P0074005 Aldh2 protein_coding protein_coding MGP_129S1SvImJ_T0074006.1 MGP_129S1SvImJ_G0030033.1 mouse_genomes_project 5 125067960 125071259 - Aldh2 protein_coding retained_intron MGP_129S1SvImJ_T0074007.1 MGP_129S1SvImJ_G0030033.1 mouse_genomes_project 5 125067961 125079738 - MGP_129S1SvImJ_P0074007 Aldh2 protein_coding protein_coding MGP_129S1SvImJ_T0074008.1 MGP_129S1SvImJ_G0030033.1 mouse_genomes_project 5 125068039 125072910 - MGP_129S1SvImJ_P0074008 Aldh2 protein_coding protein_coding MGP_129S1SvImJ_T0074009.1 MGP_129S1SvImJ_G0030033.1 mouse_genomes_project 5 125070395 125097977 - MGP_129S1SvImJ_P0074009 Aldh2 protein_coding protein_coding MGP_129S1SvImJ_T0074010.1 MGP_129S1SvImJ_G0030033.1 mouse_genomes_project 5 125071543 125075199 - Aldh2 protein_coding retained_intron MGP_129S1SvImJ_T0074011.1 MGP_129S1SvImJ_G0030033.1 mouse_genomes_project 5 125076528 125097979 - MGP_129S1SvImJ_P0074011 Aldh2 protein_coding protein_coding MGP_129S1SvImJ_T0071430.1 MGP_129S1SvImJ_G0029508.1 mouse_genomes_project 5 36627784 36638006 + MGP_129S1SvImJ_P0071430 Lyar protein_coding protein_coding MGP_129S1SvImJ_T0071431.1 MGP_129S1SvImJ_G0029508.1 mouse_genomes_project 5 36627816 36641608 + MGP_129S1SvImJ_P0071431 Lyar protein_coding protein_coding MGP_129S1SvImJ_T0071432.1 MGP_129S1SvImJ_G0029508.1 mouse_genomes_project 5 36627822 36635218 + MGP_129S1SvImJ_P0071432 Lyar protein_coding protein_coding MGP_129S1SvImJ_T0071433.1 MGP_129S1SvImJ_G0029508.1 mouse_genomes_project 5 36627829 36638007 + MGP_129S1SvImJ_P0071433 Lyar protein_coding protein_coding MGP_129S1SvImJ_T0071434.1 MGP_129S1SvImJ_G0029508.1 mouse_genomes_project 5 36627831 36638291 + MGP_129S1SvImJ_P0071434 Lyar protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071435.1 MGP_129S1SvImJ_G0029508.1 mouse_genomes_project 5 36627852 36633216 + MGP_129S1SvImJ_P0071435 Lyar protein_coding protein_coding MGP_129S1SvImJ_T0071436.1 MGP_129S1SvImJ_G0029508.1 mouse_genomes_project 5 36627856 36635402 + MGP_129S1SvImJ_P0071436 Lyar protein_coding protein_coding MGP_129S1SvImJ_T0071437.1 MGP_129S1SvImJ_G0029508.1 mouse_genomes_project 5 36630267 36637986 + MGP_129S1SvImJ_P0071437 Lyar protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071438.1 MGP_129S1SvImJ_G0029508.1 mouse_genomes_project 5 36631950 36633763 + Lyar protein_coding retained_intron MGP_129S1SvImJ_T0098952.1 MGP_129S1SvImJ_G0037030.1 mouse_genomes_project 5 32422229 32426796 - sense_intronic sense_intronic MGP_129S1SvImJ_T0072542.1 MGP_129S1SvImJ_G0029720.1 mouse_genomes_project 5 91436682 91437954 + MGP_129S1SvImJ_P0072542 Gm9958 protein_coding protein_coding MGP_129S1SvImJ_T0073377.1 MGP_129S1SvImJ_G0029906.1 mouse_genomes_project 5 114930658 114932891 - MGP_129S1SvImJ_P0073377 Gm6583 protein_coding protein_coding MGP_129S1SvImJ_T0015202.1 MGP_129S1SvImJ_G0013291.1 mouse_genomes_project 5 143217950 143218154 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008213.1 MGP_129S1SvImJ_G0006697.1 mouse_genomes_project 5 93049666 93051716 - Gm43688 lincRNA lincRNA MGP_129S1SvImJ_T0010699.1 MGP_129S1SvImJ_G0008815.1 mouse_genomes_project 5 53895950 53896057 - Gm44333 miRNA miRNA MGP_129S1SvImJ_T0015004.1 MGP_129S1SvImJ_G0013093.1 mouse_genomes_project 5 56544760 56545496 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001736.1 MGP_129S1SvImJ_G0001651.1 mouse_genomes_project 5 94310350 94312487 + TEC TEC MGP_129S1SvImJ_T0008483.1 MGP_129S1SvImJ_G0006880.1 mouse_genomes_project 5 155754026 155756688 - Gm43450 lincRNA lincRNA MGP_129S1SvImJ_T0014997.1 MGP_129S1SvImJ_G0013086.1 mouse_genomes_project 5 53667543 53679341 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070873.1 MGP_129S1SvImJ_G0029421.1 mouse_genomes_project 5 29244230 29245737 + Krtcap3 protein_coding retained_intron MGP_129S1SvImJ_T0070874.1 MGP_129S1SvImJ_G0029421.1 mouse_genomes_project 5 29244245 29245737 + MGP_129S1SvImJ_P0070874 Krtcap3 protein_coding protein_coding MGP_129S1SvImJ_T0070875.1 MGP_129S1SvImJ_G0029421.1 mouse_genomes_project 5 29244255 29245431 + Krtcap3 protein_coding retained_intron MGP_129S1SvImJ_T0070876.1 MGP_129S1SvImJ_G0029421.1 mouse_genomes_project 5 29244261 29245742 + MGP_129S1SvImJ_P0070876 Krtcap3 protein_coding protein_coding MGP_129S1SvImJ_T0070877.1 MGP_129S1SvImJ_G0029421.1 mouse_genomes_project 5 29244264 29245737 + MGP_129S1SvImJ_P0070877 Krtcap3 protein_coding protein_coding MGP_129S1SvImJ_T0070878.1 MGP_129S1SvImJ_G0029421.1 mouse_genomes_project 5 29244301 29245238 + Krtcap3 protein_coding retained_intron MGP_129S1SvImJ_T0070879.1 MGP_129S1SvImJ_G0029421.1 mouse_genomes_project 5 29244466 29245536 + Krtcap3 protein_coding retained_intron MGP_129S1SvImJ_T0070880.1 MGP_129S1SvImJ_G0029421.1 mouse_genomes_project 5 29244875 29245739 + Krtcap3 protein_coding retained_intron MGP_129S1SvImJ_T0070881.1 MGP_129S1SvImJ_G0029421.1 mouse_genomes_project 5 29245019 29245737 + Krtcap3 protein_coding retained_intron MGP_129S1SvImJ_T0070882.1 MGP_129S1SvImJ_G0029421.1 mouse_genomes_project 5 29245094 29245737 + Krtcap3 protein_coding retained_intron MGP_129S1SvImJ_T0001911.1 MGP_129S1SvImJ_G0001824.1 mouse_genomes_project 5 145073170 145075716 - TEC TEC MGP_129S1SvImJ_T0070051.1 MGP_129S1SvImJ_G0029271.1 mouse_genomes_project 5 2348968 2388352 - MGP_129S1SvImJ_P0070051 1700015F17Rik protein_coding protein_coding MGP_129S1SvImJ_T0070052.1 MGP_129S1SvImJ_G0029271.1 mouse_genomes_project 5 2348968 2370630 - MGP_129S1SvImJ_P0070052 1700015F17Rik protein_coding protein_coding MGP_129S1SvImJ_T0070053.1 MGP_129S1SvImJ_G0029271.1 mouse_genomes_project 5 2348973 2388289 - MGP_129S1SvImJ_P0070053 1700015F17Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0015007.1 MGP_129S1SvImJ_G0013096.1 mouse_genomes_project 5 57465113 57465335 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001795.1 MGP_129S1SvImJ_G0001710.1 mouse_genomes_project 5 117787972 117788530 + TEC TEC MGP_129S1SvImJ_T0073512.1 MGP_129S1SvImJ_G0029933.1 mouse_genomes_project 5 116859919 116971015 + MGP_129S1SvImJ_P0073512 Acacb protein_coding protein_coding MGP_129S1SvImJ_T0073513.1 MGP_129S1SvImJ_G0029933.1 mouse_genomes_project 5 116881645 116971009 + MGP_129S1SvImJ_P0073513 Acacb protein_coding protein_coding MGP_129S1SvImJ_T0073514.1 MGP_129S1SvImJ_G0029933.1 mouse_genomes_project 5 116891953 116907492 + MGP_129S1SvImJ_P0073514 Acacb protein_coding protein_coding MGP_129S1SvImJ_T0073515.1 MGP_129S1SvImJ_G0029933.1 mouse_genomes_project 5 116916898 116971013 + Acacb protein_coding retained_intron MGP_129S1SvImJ_T0073516.1 MGP_129S1SvImJ_G0029933.1 mouse_genomes_project 5 116968589 116969215 + Acacb protein_coding retained_intron MGP_129S1SvImJ_T0004743.1 MGP_129S1SvImJ_G0004107.1 mouse_genomes_project 5 82389817 82396360 - Gm16054 antisense antisense MGP_129S1SvImJ_T0070529.1 MGP_129S1SvImJ_G0029359.1 mouse_genomes_project 5 23007065 23011076 + Galnt11 protein_coding processed_transcript MGP_129S1SvImJ_T0070531.1 MGP_129S1SvImJ_G0029359.1 mouse_genomes_project 5 23008040 23043232 + MGP_129S1SvImJ_P0070531 Galnt11 protein_coding protein_coding MGP_129S1SvImJ_T0070532.1 MGP_129S1SvImJ_G0029359.1 mouse_genomes_project 5 23022791 23043231 + MGP_129S1SvImJ_P0070532 Galnt11 protein_coding protein_coding MGP_129S1SvImJ_T0070533.1 MGP_129S1SvImJ_G0029359.1 mouse_genomes_project 5 23023201 23026228 + MGP_129S1SvImJ_P0070533 Galnt11 protein_coding protein_coding MGP_129S1SvImJ_T0070534.1 MGP_129S1SvImJ_G0029359.1 mouse_genomes_project 5 23023781 23043232 + MGP_129S1SvImJ_P0070534 Galnt11 protein_coding protein_coding MGP_129S1SvImJ_T0073380.1 MGP_129S1SvImJ_G0029907.1 mouse_genomes_project 5 114962694 114970542 - MGP_129S1SvImJ_P0073380 Asphd2 protein_coding protein_coding MGP_129S1SvImJ_T0073381.1 MGP_129S1SvImJ_G0029907.1 mouse_genomes_project 5 114963784 114968076 - Asphd2 protein_coding processed_transcript MGP_129S1SvImJ_T0073382.1 MGP_129S1SvImJ_G0029907.1 mouse_genomes_project 5 114969827 114972353 - MGP_129S1SvImJ_P0073382 Asphd2 protein_coding protein_coding MGP_129S1SvImJ_T0073383.1 MGP_129S1SvImJ_G0029907.1 mouse_genomes_project 5 114970016 114973200 - MGP_129S1SvImJ_P0073383 Asphd2 protein_coding protein_coding MGP_129S1SvImJ_T0073384.1 MGP_129S1SvImJ_G0029907.1 mouse_genomes_project 5 114970104 114972287 - MGP_129S1SvImJ_P0073384 Asphd2 protein_coding protein_coding MGP_129S1SvImJ_T0073385.1 MGP_129S1SvImJ_G0029907.1 mouse_genomes_project 5 114970139 114972635 - MGP_129S1SvImJ_P0073385 Asphd2 protein_coding protein_coding MGP_129S1SvImJ_T0073386.1 MGP_129S1SvImJ_G0029907.1 mouse_genomes_project 5 114970209 114972259 - MGP_129S1SvImJ_P0073386 Asphd2 protein_coding protein_coding MGP_129S1SvImJ_T0001633.1 MGP_129S1SvImJ_G0001550.1 mouse_genomes_project 5 57269344 57270539 + TEC TEC MGP_129S1SvImJ_T0008193.1 MGP_129S1SvImJ_G0006680.1 mouse_genomes_project 5 77342296 77348967 - Gm15831 lincRNA lincRNA MGP_129S1SvImJ_T0000002.1 MGP_129S1SvImJ_G0000002.1 mouse_genomes_project 5 18216400 18220176 + Gm29254 3prime_overlapping_ncRNA 3prime_overlapping_ncRNA MGP_129S1SvImJ_T0000003.1 MGP_129S1SvImJ_G0000002.1 mouse_genomes_project 5 18216400 18220173 + Gm29254 3prime_overlapping_ncRNA 3prime_overlapping_ncRNA MGP_129S1SvImJ_T0075855.1 MGP_129S1SvImJ_G0030366.1 mouse_genomes_project 5 150780773 150831683 + MGP_129S1SvImJ_P0075855 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075856.1 MGP_129S1SvImJ_G0030366.1 mouse_genomes_project 5 150780781 150832097 + MGP_129S1SvImJ_P0075856 protein_coding protein_coding MGP_129S1SvImJ_T0072211.1 MGP_129S1SvImJ_G0029641.1 mouse_genomes_project 5 76360484 76373506 + Tmem165 protein_coding processed_transcript MGP_129S1SvImJ_T0072212.1 MGP_129S1SvImJ_G0029641.1 mouse_genomes_project 5 76360680 76385135 + MGP_129S1SvImJ_P0072212 Tmem165 protein_coding protein_coding MGP_129S1SvImJ_T0072213.1 MGP_129S1SvImJ_G0029641.1 mouse_genomes_project 5 76375963 76381674 + Tmem165 protein_coding retained_intron MGP_129S1SvImJ_T0072214.1 MGP_129S1SvImJ_G0029641.1 mouse_genomes_project 5 76380638 76382578 + Tmem165 protein_coding processed_transcript MGP_129S1SvImJ_T0008217.1 MGP_129S1SvImJ_G0006701.1 mouse_genomes_project 5 98133470 98145308 + Gm42601 lincRNA lincRNA MGP_129S1SvImJ_T0001827.1 MGP_129S1SvImJ_G0001742.1 mouse_genomes_project 5 125422130 125425782 - TEC TEC MGP_129S1SvImJ_T0073206.1 MGP_129S1SvImJ_G0029874.1 mouse_genomes_project 5 111872908 111880160 - MGP_129S1SvImJ_P0073206 Crlf2 protein_coding protein_coding MGP_129S1SvImJ_T0073207.1 MGP_129S1SvImJ_G0029874.1 mouse_genomes_project 5 111872912 111880211 - MGP_129S1SvImJ_P0073207 Crlf2 protein_coding protein_coding MGP_129S1SvImJ_T0073208.1 MGP_129S1SvImJ_G0029874.1 mouse_genomes_project 5 111872914 111877719 - MGP_129S1SvImJ_P0073208 Crlf2 protein_coding protein_coding MGP_129S1SvImJ_T0099900.1 MGP_129S1SvImJ_G0037967.1 mouse_genomes_project 5 16974379 16974482 - Gm25335 snRNA snRNA MGP_129S1SvImJ_T0071824.1 MGP_129S1SvImJ_G0029578.1 mouse_genomes_project 5 65047789 65073112 - MGP_129S1SvImJ_P0071824 Ugdh protein_coding protein_coding MGP_129S1SvImJ_T0071825.1 MGP_129S1SvImJ_G0029578.1 mouse_genomes_project 5 65047792 65061354 - Ugdh protein_coding retained_intron MGP_129S1SvImJ_T0071826.1 MGP_129S1SvImJ_G0029578.1 mouse_genomes_project 5 65053397 65058686 - Ugdh protein_coding retained_intron MGP_129S1SvImJ_T0071827.1 MGP_129S1SvImJ_G0029578.1 mouse_genomes_project 5 65059233 65065530 - MGP_129S1SvImJ_P0071827 Ugdh protein_coding protein_coding MGP_129S1SvImJ_T0102590.1 MGP_129S1SvImJ_G0040423.1 mouse_genomes_project 5 157614932 157620824 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0072622.1 MGP_129S1SvImJ_G0029745.1 mouse_genomes_project 5 93396060 93430428 - MGP_129S1SvImJ_P0072622 Ppef2 protein_coding protein_coding MGP_129S1SvImJ_T0072623.1 MGP_129S1SvImJ_G0029745.1 mouse_genomes_project 5 93396070 93400086 - Ppef2 protein_coding processed_transcript MGP_129S1SvImJ_T0072624.1 MGP_129S1SvImJ_G0029745.1 mouse_genomes_project 5 93396355 93427316 - MGP_129S1SvImJ_P0072624 Ppef2 protein_coding protein_coding MGP_129S1SvImJ_T0011628.1 MGP_129S1SvImJ_G0009744.1 mouse_genomes_project 5 114786122 114786272 - Gm27627 misc_RNA misc_RNA MGP_129S1SvImJ_T0070365.1 MGP_129S1SvImJ_G0029329.1 mouse_genomes_project 5 21084569 21144468 + MGP_129S1SvImJ_P0070365 Kmt2e protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070366.1 MGP_129S1SvImJ_G0029329.1 mouse_genomes_project 5 21084656 21161788 + MGP_129S1SvImJ_P0070366 Kmt2e protein_coding protein_coding MGP_129S1SvImJ_T0070367.1 MGP_129S1SvImJ_G0029329.1 mouse_genomes_project 5 21136569 21143519 + Kmt2e protein_coding processed_transcript MGP_129S1SvImJ_T0070368.1 MGP_129S1SvImJ_G0029329.1 mouse_genomes_project 5 21143568 21153818 + MGP_129S1SvImJ_P0070368 Kmt2e protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070369.1 MGP_129S1SvImJ_G0029329.1 mouse_genomes_project 5 21143616 21160426 + MGP_129S1SvImJ_P0070369 Kmt2e protein_coding protein_coding MGP_129S1SvImJ_T0070370.1 MGP_129S1SvImJ_G0029329.1 mouse_genomes_project 5 21150488 21158090 + MGP_129S1SvImJ_P0070370 Kmt2e protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070371.1 MGP_129S1SvImJ_G0029329.1 mouse_genomes_project 5 21151025 21153968 + Kmt2e protein_coding retained_intron MGP_129S1SvImJ_T0070372.1 MGP_129S1SvImJ_G0029329.1 mouse_genomes_project 5 21155881 21158133 + MGP_129S1SvImJ_P0070372 Kmt2e protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072857.1 MGP_129S1SvImJ_G0029792.1 mouse_genomes_project 5 102310053 102316572 + MGP_129S1SvImJ_P0072857 Mrps18c protein_coding protein_coding MGP_129S1SvImJ_T0072858.1 MGP_129S1SvImJ_G0029792.1 mouse_genomes_project 5 102310098 102311045 + Mrps18c protein_coding retained_intron MGP_129S1SvImJ_T0072859.1 MGP_129S1SvImJ_G0029792.1 mouse_genomes_project 5 102310098 102316632 + MGP_129S1SvImJ_P0072859 Mrps18c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072860.1 MGP_129S1SvImJ_G0029792.1 mouse_genomes_project 5 102315266 102316633 + Mrps18c protein_coding retained_intron MGP_129S1SvImJ_T0070634.1 MGP_129S1SvImJ_G0029384.1 mouse_genomes_project 5 28101793 28138726 - MGP_129S1SvImJ_P0070634 Hadha protein_coding protein_coding MGP_129S1SvImJ_T0070635.1 MGP_129S1SvImJ_G0029384.1 mouse_genomes_project 5 28102915 28138540 - Hadha protein_coding processed_transcript MGP_129S1SvImJ_T0070636.1 MGP_129S1SvImJ_G0029384.1 mouse_genomes_project 5 28103388 28103795 - Hadha protein_coding processed_transcript MGP_129S1SvImJ_T0070637.1 MGP_129S1SvImJ_G0029384.1 mouse_genomes_project 5 28104958 28110605 - Hadha protein_coding retained_intron MGP_129S1SvImJ_T0070638.1 MGP_129S1SvImJ_G0029384.1 mouse_genomes_project 5 28110221 28118526 - MGP_129S1SvImJ_P0070638 Hadha protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070639.1 MGP_129S1SvImJ_G0029384.1 mouse_genomes_project 5 28112200 28124518 - Hadha protein_coding retained_intron MGP_129S1SvImJ_T0070640.1 MGP_129S1SvImJ_G0029384.1 mouse_genomes_project 5 28116718 28138526 - Hadha protein_coding retained_intron MGP_129S1SvImJ_T0070641.1 MGP_129S1SvImJ_G0029384.1 mouse_genomes_project 5 28130570 28133025 - Hadha protein_coding retained_intron MGP_129S1SvImJ_T0070642.1 MGP_129S1SvImJ_G0029384.1 mouse_genomes_project 5 28137485 28138554 - Hadha protein_coding retained_intron MGP_129S1SvImJ_T0074684.1 MGP_129S1SvImJ_G0030142.1 mouse_genomes_project 5 134288214 134334491 + MGP_129S1SvImJ_P0074684 Rabgef1 protein_coding protein_coding MGP_129S1SvImJ_T0074685.1 MGP_129S1SvImJ_G0030142.1 mouse_genomes_project 5 134288240 134330594 + MGP_129S1SvImJ_P0074685 Rabgef1 protein_coding protein_coding MGP_129S1SvImJ_T0074686.1 MGP_129S1SvImJ_G0030142.1 mouse_genomes_project 5 134303852 134328780 + MGP_129S1SvImJ_P0074686 Rabgef1 protein_coding protein_coding MGP_129S1SvImJ_T0074687.1 MGP_129S1SvImJ_G0030142.1 mouse_genomes_project 5 134303852 134334486 + MGP_129S1SvImJ_P0074687 Rabgef1 protein_coding protein_coding MGP_129S1SvImJ_T0074688.1 MGP_129S1SvImJ_G0030142.1 mouse_genomes_project 5 134303899 134326086 + Rabgef1 protein_coding processed_transcript MGP_129S1SvImJ_T0074689.1 MGP_129S1SvImJ_G0030142.1 mouse_genomes_project 5 134303911 134308015 + Rabgef1 protein_coding retained_intron MGP_129S1SvImJ_T0074690.1 MGP_129S1SvImJ_G0030142.1 mouse_genomes_project 5 134326048 134331143 + Rabgef1 protein_coding retained_intron MGP_129S1SvImJ_T0074691.1 MGP_129S1SvImJ_G0030142.1 mouse_genomes_project 5 134333317 134334199 + MGP_129S1SvImJ_P0074691 Rabgef1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0004655.1 MGP_129S1SvImJ_G0004036.1 mouse_genomes_project 5 13328196 13332063 - Gm43000 antisense antisense MGP_129S1SvImJ_T0001904.1 MGP_129S1SvImJ_G0001817.1 mouse_genomes_project 5 140007169 140008810 - TEC TEC MGP_129S1SvImJ_T0071048.1 MGP_129S1SvImJ_G0029449.1 mouse_genomes_project 5 31818600 31840660 - MGP_129S1SvImJ_P0071048 Slbp protein_coding protein_coding MGP_129S1SvImJ_T0071049.1 MGP_129S1SvImJ_G0029449.1 mouse_genomes_project 5 31826610 31840568 - MGP_129S1SvImJ_P0071049 Slbp protein_coding unknown_likely_coding MGP_129S1SvImJ_T0071050.1 MGP_129S1SvImJ_G0029449.1 mouse_genomes_project 5 31826742 31828390 - Slbp protein_coding retained_intron MGP_129S1SvImJ_T0071051.1 MGP_129S1SvImJ_G0029449.1 mouse_genomes_project 5 31828168 31840653 - Slbp protein_coding retained_intron MGP_129S1SvImJ_T0071052.1 MGP_129S1SvImJ_G0029449.1 mouse_genomes_project 5 31829449 31840615 - MGP_129S1SvImJ_P0071052 Slbp protein_coding protein_coding MGP_129S1SvImJ_T0071053.1 MGP_129S1SvImJ_G0029449.1 mouse_genomes_project 5 31832252 31840611 - MGP_129S1SvImJ_P0071053 Slbp protein_coding protein_coding MGP_129S1SvImJ_T0071054.1 MGP_129S1SvImJ_G0029449.1 mouse_genomes_project 5 31833940 31840668 - Slbp protein_coding retained_intron MGP_129S1SvImJ_T0071055.1 MGP_129S1SvImJ_G0029449.1 mouse_genomes_project 5 31839939 31840616 - Slbp protein_coding retained_intron MGP_129S1SvImJ_T0001812.1 MGP_129S1SvImJ_G0001727.1 mouse_genomes_project 5 121843833 121848790 + TEC TEC MGP_129S1SvImJ_T0014968.1 MGP_129S1SvImJ_G0013057.1 mouse_genomes_project 5 34230558 34230853 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073479.1 MGP_129S1SvImJ_G0029927.1 mouse_genomes_project 5 116635072 116704108 - MGP_129S1SvImJ_P0073479 Ssh1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0073480.1 MGP_129S1SvImJ_G0029927.1 mouse_genomes_project 5 116635076 116704261 - MGP_129S1SvImJ_P0073480 Ssh1 protein_coding protein_coding MGP_129S1SvImJ_T0073481.1 MGP_129S1SvImJ_G0029927.1 mouse_genomes_project 5 116637744 116704128 - MGP_129S1SvImJ_P0073481 Ssh1 protein_coding protein_coding MGP_129S1SvImJ_T0073482.1 MGP_129S1SvImJ_G0029927.1 mouse_genomes_project 5 116640152 116700091 - MGP_129S1SvImJ_P0073482 Ssh1 protein_coding protein_coding MGP_129S1SvImJ_T0073483.1 MGP_129S1SvImJ_G0029927.1 mouse_genomes_project 5 116665549 116704176 - MGP_129S1SvImJ_P0073483 Ssh1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073484.1 MGP_129S1SvImJ_G0029927.1 mouse_genomes_project 5 116669790 116670947 - MGP_129S1SvImJ_P0073484 Ssh1 protein_coding protein_coding MGP_129S1SvImJ_T0073485.1 MGP_129S1SvImJ_G0029927.1 mouse_genomes_project 5 116670794 116704116 - Ssh1 protein_coding retained_intron MGP_129S1SvImJ_T0001922.1 MGP_129S1SvImJ_G0001835.1 mouse_genomes_project 5 149550134 149551930 + TEC TEC MGP_129S1SvImJ_T0070913.1 MGP_129S1SvImJ_G0029426.1 mouse_genomes_project 5 29502810 29505547 + 4930548H24Rik protein_coding retained_intron MGP_129S1SvImJ_T0070914.1 MGP_129S1SvImJ_G0029426.1 mouse_genomes_project 5 29502929 29505547 + MGP_129S1SvImJ_P0070914 4930548H24Rik protein_coding protein_coding MGP_129S1SvImJ_T0070795.1 MGP_129S1SvImJ_G0029410.1 mouse_genomes_project 5 29097019 29123209 + MGP_129S1SvImJ_P0070795 Trim54 protein_coding protein_coding MGP_129S1SvImJ_T0070796.1 MGP_129S1SvImJ_G0029410.1 mouse_genomes_project 5 29097041 29123211 + MGP_129S1SvImJ_P0070796 Trim54 protein_coding protein_coding MGP_129S1SvImJ_T0015146.1 MGP_129S1SvImJ_G0013235.1 mouse_genomes_project 5 112948713 112950160 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0071564.1 MGP_129S1SvImJ_G0029532.1 mouse_genomes_project 5 44156585 44166968 + MGP_129S1SvImJ_P0071564 Clrn2 protein_coding protein_coding MGP_129S1SvImJ_T0001886.1 MGP_129S1SvImJ_G0001800.1 mouse_genomes_project 5 136456279 136457915 - TEC TEC MGP_129S1SvImJ_T0004650.1 MGP_129S1SvImJ_G0004031.1 mouse_genomes_project 5 4998812 5015299 - Gm15731 antisense antisense MGP_129S1SvImJ_T0075811.1 MGP_129S1SvImJ_G0030357.1 mouse_genomes_project 5 150551970 150565165 - MGP_129S1SvImJ_P0075811 Pdap1 protein_coding protein_coding MGP_129S1SvImJ_T0075812.1 MGP_129S1SvImJ_G0030357.1 mouse_genomes_project 5 150553285 150561637 - Pdap1 protein_coding processed_transcript MGP_129S1SvImJ_T0075813.1 MGP_129S1SvImJ_G0030357.1 mouse_genomes_project 5 150554572 150560504 - Pdap1 protein_coding retained_intron MGP_129S1SvImJ_T0075814.1 MGP_129S1SvImJ_G0030357.1 mouse_genomes_project 5 150556402 150560658 - Pdap1 protein_coding retained_intron MGP_129S1SvImJ_T0075815.1 MGP_129S1SvImJ_G0030357.1 mouse_genomes_project 5 150561518 150564925 - Pdap1 protein_coding retained_intron MGP_129S1SvImJ_T0015042.1 MGP_129S1SvImJ_G0013131.1 mouse_genomes_project 5 72074930 72075402 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001530.1 MGP_129S1SvImJ_G0001448.1 mouse_genomes_project 5 33667572 33668027 + TEC TEC MGP_129S1SvImJ_T0001800.1 MGP_129S1SvImJ_G0001715.1 mouse_genomes_project 5 118826610 118828468 + TEC TEC MGP_129S1SvImJ_T0072397.1 MGP_129S1SvImJ_G0029676.1 mouse_genomes_project 5 87765974 87779337 - MGP_129S1SvImJ_P0072397 Ugt2b1 protein_coding protein_coding MGP_129S1SvImJ_T0008412.1 MGP_129S1SvImJ_G0006825.1 mouse_genomes_project 5 133465408 133466568 + Gm43001 lincRNA lincRNA MGP_129S1SvImJ_T0008413.1 MGP_129S1SvImJ_G0006825.1 mouse_genomes_project 5 133465966 133466479 + Gm43001 lincRNA lincRNA MGP_129S1SvImJ_T0073431.1 MGP_129S1SvImJ_G0029917.1 mouse_genomes_project 5 116010695 116011153 + MGP_129S1SvImJ_P0073431 Aym1 protein_coding protein_coding MGP_129S1SvImJ_T0001613.1 MGP_129S1SvImJ_G0001530.1 mouse_genomes_project 5 51035147 51037592 - TEC TEC MGP_129S1SvImJ_T0070836.1 MGP_129S1SvImJ_G0029416.1 mouse_genomes_project 5 29181803 29187465 + MGP_129S1SvImJ_P0070836 Snx17 protein_coding protein_coding MGP_129S1SvImJ_T0070837.1 MGP_129S1SvImJ_G0029416.1 mouse_genomes_project 5 29181818 29184011 + MGP_129S1SvImJ_P0070837 Snx17 protein_coding protein_coding MGP_129S1SvImJ_T0070838.1 MGP_129S1SvImJ_G0029416.1 mouse_genomes_project 5 29181870 29187459 + MGP_129S1SvImJ_P0070838 Snx17 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070839.1 MGP_129S1SvImJ_G0029416.1 mouse_genomes_project 5 29181882 29187464 + Snx17 protein_coding retained_intron MGP_129S1SvImJ_T0070840.1 MGP_129S1SvImJ_G0029416.1 mouse_genomes_project 5 29181882 29185621 + MGP_129S1SvImJ_P0070840 Snx17 protein_coding protein_coding MGP_129S1SvImJ_T0070841.1 MGP_129S1SvImJ_G0029416.1 mouse_genomes_project 5 29181911 29187465 + MGP_129S1SvImJ_P0070841 Snx17 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070842.1 MGP_129S1SvImJ_G0029416.1 mouse_genomes_project 5 29182430 29187708 + Snx17 protein_coding retained_intron MGP_129S1SvImJ_T0070843.1 MGP_129S1SvImJ_G0029416.1 mouse_genomes_project 5 29183419 29184999 + Snx17 protein_coding retained_intron MGP_129S1SvImJ_T0070844.1 MGP_129S1SvImJ_G0029416.1 mouse_genomes_project 5 29183949 29185815 + Snx17 protein_coding retained_intron MGP_129S1SvImJ_T0070845.1 MGP_129S1SvImJ_G0029416.1 mouse_genomes_project 5 29184407 29186275 + Snx17 protein_coding retained_intron MGP_129S1SvImJ_T0070846.1 MGP_129S1SvImJ_G0029416.1 mouse_genomes_project 5 29184615 29186709 + Snx17 protein_coding processed_transcript MGP_129S1SvImJ_T0001748.1 MGP_129S1SvImJ_G0001663.1 mouse_genomes_project 5 99706405 99709312 + TEC TEC MGP_129S1SvImJ_T0001548.1 MGP_129S1SvImJ_G0001466.1 mouse_genomes_project 5 42420731 42422803 - TEC TEC MGP_129S1SvImJ_T0001570.1 MGP_129S1SvImJ_G0001488.1 mouse_genomes_project 5 45214459 45216577 + TEC TEC MGP_129S1SvImJ_T0008133.1 MGP_129S1SvImJ_G0006631.1 mouse_genomes_project 5 43546905 43560004 + Gm42750 lincRNA lincRNA MGP_129S1SvImJ_T0008312.1 MGP_129S1SvImJ_G0006761.1 mouse_genomes_project 5 115172941 115173675 + Gm27004 lincRNA lincRNA MGP_129S1SvImJ_T0070271.1 MGP_129S1SvImJ_G0029310.1 mouse_genomes_project 5 18270951 18397003 - MGP_129S1SvImJ_P0070271 Phtf2 protein_coding protein_coding MGP_129S1SvImJ_T0070272.1 MGP_129S1SvImJ_G0029310.1 mouse_genomes_project 5 18271961 18288514 - MGP_129S1SvImJ_P0070272 Phtf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070273.1 MGP_129S1SvImJ_G0029310.1 mouse_genomes_project 5 18273351 18396962 - MGP_129S1SvImJ_P0070273 Phtf2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0070274.1 MGP_129S1SvImJ_G0029310.1 mouse_genomes_project 5 18299034 18370392 - Phtf2 protein_coding processed_transcript MGP_129S1SvImJ_T0070275.1 MGP_129S1SvImJ_G0029310.1 mouse_genomes_project 5 18299037 18324806 - MGP_129S1SvImJ_P0070275 Phtf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070276.1 MGP_129S1SvImJ_G0029310.1 mouse_genomes_project 5 18305165 18396956 - Phtf2 protein_coding retained_intron MGP_129S1SvImJ_T0070277.1 MGP_129S1SvImJ_G0029310.1 mouse_genomes_project 5 18309730 18396957 - Phtf2 protein_coding retained_intron MGP_129S1SvImJ_T0070278.1 MGP_129S1SvImJ_G0029310.1 mouse_genomes_project 5 18324782 18396924 - MGP_129S1SvImJ_P0070278 Phtf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0001538.1 MGP_129S1SvImJ_G0001456.1 mouse_genomes_project 5 37899744 37901312 - TEC TEC MGP_129S1SvImJ_T0075571.1 MGP_129S1SvImJ_G0030307.1 mouse_genomes_project 5 145884730 145956624 - MGP_129S1SvImJ_P0075571 Gna12 protein_coding protein_coding MGP_129S1SvImJ_T0001887.1 MGP_129S1SvImJ_G0001801.1 mouse_genomes_project 5 136624665 136626960 - TEC TEC MGP_129S1SvImJ_T0074154.1 MGP_129S1SvImJ_G0030055.1 mouse_genomes_project 5 126288597 126330601 + MGP_129S1SvImJ_P0074154 P2rx7 protein_coding protein_coding MGP_129S1SvImJ_T0074155.1 MGP_129S1SvImJ_G0030055.1 mouse_genomes_project 5 126288597 126330593 + MGP_129S1SvImJ_P0074155 P2rx7 protein_coding protein_coding MGP_129S1SvImJ_T0074156.1 MGP_129S1SvImJ_G0030055.1 mouse_genomes_project 5 126288625 126337736 + MGP_129S1SvImJ_P0074156 P2rx7 protein_coding protein_coding MGP_129S1SvImJ_T0074157.1 MGP_129S1SvImJ_G0030055.1 mouse_genomes_project 5 126288695 126301834 + MGP_129S1SvImJ_P0074157 P2rx7 protein_coding protein_coding MGP_129S1SvImJ_T0074158.1 MGP_129S1SvImJ_G0030055.1 mouse_genomes_project 5 126288851 126292479 + P2rx7 protein_coding processed_transcript MGP_129S1SvImJ_T0074159.1 MGP_129S1SvImJ_G0030055.1 mouse_genomes_project 5 126296977 126327684 + P2rx7 protein_coding processed_transcript MGP_129S1SvImJ_T0074160.1 MGP_129S1SvImJ_G0030055.1 mouse_genomes_project 5 126328252 126329850 + P2rx7 protein_coding processed_transcript MGP_129S1SvImJ_T0074161.1 MGP_129S1SvImJ_G0030055.1 mouse_genomes_project 5 126328492 126330588 + P2rx7 protein_coding retained_intron MGP_129S1SvImJ_T0014974.1 MGP_129S1SvImJ_G0013063.1 mouse_genomes_project 5 37856082 37856981 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101720.1 MGP_129S1SvImJ_G0039724.1 mouse_genomes_project 5 65890275 65890654 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0014988.1 MGP_129S1SvImJ_G0013077.1 mouse_genomes_project 5 47476109 47477474 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098970.1 MGP_129S1SvImJ_G0037047.1 mouse_genomes_project 5 141551608 141559962 - Gm20485 sense_intronic sense_intronic MGP_129S1SvImJ_T0099970.1 MGP_129S1SvImJ_G0038037.1 mouse_genomes_project 5 134974110 134974214 + Gm23761 snRNA snRNA MGP_129S1SvImJ_T0015227.1 MGP_129S1SvImJ_G0013316.1 mouse_genomes_project 5 151538958 151539762 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001850.1 MGP_129S1SvImJ_G0001764.1 mouse_genomes_project 5 129327305 129330165 + TEC TEC MGP_129S1SvImJ_T0073880.1 MGP_129S1SvImJ_G0030003.1 mouse_genomes_project 5 123832898 123840276 + MGP_129S1SvImJ_P0073880 Sds protein_coding protein_coding MGP_129S1SvImJ_T0073881.1 MGP_129S1SvImJ_G0030003.1 mouse_genomes_project 5 123832903 123840276 + MGP_129S1SvImJ_P0073881 Sds protein_coding protein_coding MGP_129S1SvImJ_T0073882.1 MGP_129S1SvImJ_G0030003.1 mouse_genomes_project 5 123835230 123837032 + MGP_129S1SvImJ_P0073882 Sds protein_coding protein_coding MGP_129S1SvImJ_T0073883.1 MGP_129S1SvImJ_G0030003.1 mouse_genomes_project 5 123836707 123837233 + Sds protein_coding retained_intron MGP_129S1SvImJ_T0073279.1 MGP_129S1SvImJ_G0029888.1 mouse_genomes_project 5 112813641 112902399 - MGP_129S1SvImJ_P0073279 Fbrsl1 protein_coding protein_coding MGP_129S1SvImJ_T0073280.1 MGP_129S1SvImJ_G0029888.1 mouse_genomes_project 5 112814678 112902382 - MGP_129S1SvImJ_P0073280 Fbrsl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073281.1 MGP_129S1SvImJ_G0029888.1 mouse_genomes_project 5 112814929 112902063 - MGP_129S1SvImJ_P0073281 Fbrsl1 protein_coding protein_coding MGP_129S1SvImJ_T0073282.1 MGP_129S1SvImJ_G0029888.1 mouse_genomes_project 5 112830738 112886922 - MGP_129S1SvImJ_P0073282 Fbrsl1 protein_coding protein_coding MGP_129S1SvImJ_T0073283.1 MGP_129S1SvImJ_G0029888.1 mouse_genomes_project 5 112883782 112885770 - Fbrsl1 protein_coding processed_transcript MGP_129S1SvImJ_T0073284.1 MGP_129S1SvImJ_G0029888.1 mouse_genomes_project 5 112885902 112887229 - Fbrsl1 protein_coding processed_transcript MGP_129S1SvImJ_T0073285.1 MGP_129S1SvImJ_G0029888.1 mouse_genomes_project 5 112885902 112902399 - MGP_129S1SvImJ_P0073285 Fbrsl1 protein_coding protein_coding MGP_129S1SvImJ_T0073198.1 MGP_129S1SvImJ_G0029866.1 mouse_genomes_project 5 110912566 110933826 - MGP_129S1SvImJ_P0073198 Tmed11 protein_coding protein_coding MGP_129S1SvImJ_T0001604.1 MGP_129S1SvImJ_G0001521.1 mouse_genomes_project 5 49750046 49754735 + TEC TEC MGP_129S1SvImJ_T0008259.1 MGP_129S1SvImJ_G0006730.1 mouse_genomes_project 5 107299538 107304084 + Gm42749 lincRNA lincRNA MGP_129S1SvImJ_T0008260.1 MGP_129S1SvImJ_G0006730.1 mouse_genomes_project 5 107303457 107305842 + Gm42749 lincRNA lincRNA MGP_129S1SvImJ_T0101204.1 MGP_129S1SvImJ_G0039271.1 mouse_genomes_project 5 93358139 93358283 + Gm25290 snoRNA snoRNA MGP_129S1SvImJ_T0072015.1 MGP_129S1SvImJ_G0029606.1 mouse_genomes_project 5 70828988 70977526 - MGP_129S1SvImJ_P0072015 Gabra2 protein_coding protein_coding MGP_129S1SvImJ_T0072016.1 MGP_129S1SvImJ_G0029606.1 mouse_genomes_project 5 70830876 70977486 - MGP_129S1SvImJ_P0072016 Gabra2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072017.1 MGP_129S1SvImJ_G0029606.1 mouse_genomes_project 5 70832323 70888402 - Gabra2 protein_coding retained_intron MGP_129S1SvImJ_T0072018.1 MGP_129S1SvImJ_G0029606.1 mouse_genomes_project 5 70832429 70976357 - MGP_129S1SvImJ_P0072018 Gabra2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072019.1 MGP_129S1SvImJ_G0029606.1 mouse_genomes_project 5 70845036 70976917 - Gabra2 protein_coding processed_transcript MGP_129S1SvImJ_T0072020.1 MGP_129S1SvImJ_G0029606.1 mouse_genomes_project 5 70973466 70976582 - Gabra2 protein_coding retained_intron MGP_129S1SvImJ_T0001830.1 MGP_129S1SvImJ_G0001745.1 mouse_genomes_project 5 126117906 126120068 - TEC TEC MGP_129S1SvImJ_T0008074.1 MGP_129S1SvImJ_G0006592.1 mouse_genomes_project 5 22175573 22176155 + 2310074N15Rik lincRNA lincRNA MGP_129S1SvImJ_T0074783.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138755931 138865150 - MGP_129S1SvImJ_P0074783 Gtf2ird1 protein_coding protein_coding MGP_129S1SvImJ_T0074784.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138755931 138864690 - MGP_129S1SvImJ_P0074784 Gtf2ird1 protein_coding protein_coding MGP_129S1SvImJ_T0074785.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138755936 138865122 - MGP_129S1SvImJ_P0074785 Gtf2ird1 protein_coding protein_coding MGP_129S1SvImJ_T0074786.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138755944 138865150 - MGP_129S1SvImJ_P0074786 Gtf2ird1 protein_coding protein_coding MGP_129S1SvImJ_T0074787.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138755954 138865010 - MGP_129S1SvImJ_P0074787 Gtf2ird1 protein_coding protein_coding MGP_129S1SvImJ_T0074788.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138755954 138865018 - MGP_129S1SvImJ_P0074788 Gtf2ird1 protein_coding protein_coding MGP_129S1SvImJ_T0074789.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138755954 138865010 - MGP_129S1SvImJ_P0074789 Gtf2ird1 protein_coding protein_coding MGP_129S1SvImJ_T0074790.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138755972 138865023 - MGP_129S1SvImJ_P0074790 Gtf2ird1 protein_coding protein_coding MGP_129S1SvImJ_T0074791.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138756848 138865010 - MGP_129S1SvImJ_P0074791 Gtf2ird1 protein_coding protein_coding MGP_129S1SvImJ_T0074792.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138756848 138865023 - MGP_129S1SvImJ_P0074792 Gtf2ird1 protein_coding protein_coding MGP_129S1SvImJ_T0074793.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138756929 138865020 - MGP_129S1SvImJ_P0074793 Gtf2ird1 protein_coding protein_coding MGP_129S1SvImJ_T0074794.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138757098 138820876 - MGP_129S1SvImJ_P0074794 Gtf2ird1 protein_coding protein_coding MGP_129S1SvImJ_T0074795.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138761609 138791414 - MGP_129S1SvImJ_P0074795 Gtf2ird1 protein_coding protein_coding MGP_129S1SvImJ_T0074796.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138763224 138791435 - MGP_129S1SvImJ_P0074796 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074797.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138776854 138864711 - Gtf2ird1 protein_coding retained_intron MGP_129S1SvImJ_T0074798.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138785541 138800248 - MGP_129S1SvImJ_P0074798 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074799.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138785541 138800248 - MGP_129S1SvImJ_P0074799 Gtf2ird1 protein_coding protein_coding MGP_129S1SvImJ_T0074800.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138785750 138787461 - Gtf2ird1 protein_coding retained_intron MGP_129S1SvImJ_T0074801.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138785753 138800248 - MGP_129S1SvImJ_P0074801 Gtf2ird1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074802.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138786737 138800248 - MGP_129S1SvImJ_P0074802 Gtf2ird1 protein_coding protein_coding MGP_129S1SvImJ_T0074803.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138787778 138800152 - Gtf2ird1 protein_coding retained_intron MGP_129S1SvImJ_T0074804.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138787894 138806638 - Gtf2ird1 protein_coding retained_intron MGP_129S1SvImJ_T0074805.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138795452 138818971 - MGP_129S1SvImJ_P0074805 Gtf2ird1 protein_coding protein_coding MGP_129S1SvImJ_T0074806.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138807352 138865113 - Gtf2ird1 protein_coding retained_intron MGP_129S1SvImJ_T0074807.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138809245 138865108 - Gtf2ird1 protein_coding processed_transcript MGP_129S1SvImJ_T0074808.1 MGP_129S1SvImJ_G0030156.1 mouse_genomes_project 5 138815526 138864359 - MGP_129S1SvImJ_P0074808 Gtf2ird1 protein_coding protein_coding MGP_129S1SvImJ_T0001769.1 MGP_129S1SvImJ_G0001684.1 mouse_genomes_project 5 109733918 109734915 + TEC TEC MGP_129S1SvImJ_T0018248.1 MGP_129S1SvImJ_G0015621.1 mouse_genomes_project 5 155790613 155798269 + Gm43451 processed_transcript lincRNA MGP_129S1SvImJ_T0018249.1 MGP_129S1SvImJ_G0015621.1 mouse_genomes_project 5 155797644 155798514 + Gm43451 processed_transcript retained_intron MGP_129S1SvImJ_T0072769.1 MGP_129S1SvImJ_G0029777.1 mouse_genomes_project 5 100306930 100416820 - MGP_129S1SvImJ_P0072769 Prkg2 protein_coding protein_coding MGP_129S1SvImJ_T0072770.1 MGP_129S1SvImJ_G0029777.1 mouse_genomes_project 5 100308438 100320688 - MGP_129S1SvImJ_P0072770 Prkg2 protein_coding protein_coding MGP_129S1SvImJ_T0072771.1 MGP_129S1SvImJ_G0029777.1 mouse_genomes_project 5 100308438 100320686 - MGP_129S1SvImJ_P0072771 Prkg2 protein_coding protein_coding MGP_129S1SvImJ_T0072772.1 MGP_129S1SvImJ_G0029777.1 mouse_genomes_project 5 100308890 100416504 - MGP_129S1SvImJ_P0072772 Prkg2 protein_coding protein_coding MGP_129S1SvImJ_T0072773.1 MGP_129S1SvImJ_G0029777.1 mouse_genomes_project 5 100324238 100344547 - Prkg2 protein_coding retained_intron MGP_129S1SvImJ_T0001459.1 MGP_129S1SvImJ_G0001380.1 mouse_genomes_project 5 5294446 5296510 - TEC TEC MGP_129S1SvImJ_T0071353.1 MGP_129S1SvImJ_G0029494.1 mouse_genomes_project 5 35122388 35122766 - MGP_129S1SvImJ_P0071353 Gm5814 protein_coding protein_coding MGP_129S1SvImJ_T0099914.1 MGP_129S1SvImJ_G0037981.1 mouse_genomes_project 5 34980979 34981083 - Gm24878 snRNA snRNA MGP_129S1SvImJ_T0074859.1 MGP_129S1SvImJ_G0030169.1 mouse_genomes_project 5 139486448 139487095 + MGP_129S1SvImJ_P0074859 Abhd11 protein_coding protein_coding MGP_129S1SvImJ_T0074860.1 MGP_129S1SvImJ_G0030169.1 mouse_genomes_project 5 139486491 139489206 + MGP_129S1SvImJ_P0074860 Abhd11 protein_coding protein_coding MGP_129S1SvImJ_T0074861.1 MGP_129S1SvImJ_G0030169.1 mouse_genomes_project 5 139486726 139489206 + MGP_129S1SvImJ_P0074861 Abhd11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074862.1 MGP_129S1SvImJ_G0030169.1 mouse_genomes_project 5 139486741 139489206 + MGP_129S1SvImJ_P0074862 Abhd11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074863.1 MGP_129S1SvImJ_G0030169.1 mouse_genomes_project 5 139486747 139489055 + MGP_129S1SvImJ_P0074863 Abhd11 protein_coding protein_coding MGP_129S1SvImJ_T0074864.1 MGP_129S1SvImJ_G0030169.1 mouse_genomes_project 5 139487008 139489012 + MGP_129S1SvImJ_P0074864 Abhd11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0099906.1 MGP_129S1SvImJ_G0037973.1 mouse_genomes_project 5 22166152 22166253 - Gm22333 snRNA snRNA MGP_129S1SvImJ_T0001655.1 MGP_129S1SvImJ_G0001571.1 mouse_genomes_project 5 65177616 65181624 - TEC TEC MGP_129S1SvImJ_T0075919.1 MGP_129S1SvImJ_G0030386.1 mouse_genomes_project 5 152913262 152919116 + MGP_129S1SvImJ_P0075919 Pdx1 protein_coding protein_coding MGP_129S1SvImJ_T0010729.1 MGP_129S1SvImJ_G0008845.1 mouse_genomes_project 5 121593818 121593910 - Gm26455 miRNA miRNA MGP_129S1SvImJ_T0008393.1 MGP_129S1SvImJ_G0006815.1 mouse_genomes_project 5 130770177 130809139 + Gm42954 lincRNA lincRNA MGP_129S1SvImJ_T0008434.1 MGP_129S1SvImJ_G0006843.1 mouse_genomes_project 5 144917122 144925001 + Gm42423 lincRNA lincRNA MGP_129S1SvImJ_T0072878.1 MGP_129S1SvImJ_G0029797.1 mouse_genomes_project 5 103416159 103566193 - MGP_129S1SvImJ_P0072878 Wdfy3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0072879.1 MGP_129S1SvImJ_G0029797.1 mouse_genomes_project 5 103416160 103662444 - MGP_129S1SvImJ_P0072879 Wdfy3 protein_coding protein_coding MGP_129S1SvImJ_T0072880.1 MGP_129S1SvImJ_G0029797.1 mouse_genomes_project 5 103418143 103434701 - Wdfy3 protein_coding retained_intron MGP_129S1SvImJ_T0072881.1 MGP_129S1SvImJ_G0029797.1 mouse_genomes_project 5 103419364 103566193 - MGP_129S1SvImJ_P0072881 Wdfy3 protein_coding protein_coding MGP_129S1SvImJ_T0072882.1 MGP_129S1SvImJ_G0029797.1 mouse_genomes_project 5 103506777 103514826 - MGP_129S1SvImJ_P0072882 Wdfy3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072883.1 MGP_129S1SvImJ_G0029797.1 mouse_genomes_project 5 103513266 103662444 - MGP_129S1SvImJ_P0072883 Wdfy3 protein_coding protein_coding MGP_129S1SvImJ_T0072884.1 MGP_129S1SvImJ_G0029797.1 mouse_genomes_project 5 103519053 103521649 - Wdfy3 protein_coding processed_transcript MGP_129S1SvImJ_T0072042.1 MGP_129S1SvImJ_G0029612.1 mouse_genomes_project 5 72432239 72481753 - MGP_129S1SvImJ_P0072042 Nfxl1 protein_coding protein_coding MGP_129S1SvImJ_T0072043.1 MGP_129S1SvImJ_G0029612.1 mouse_genomes_project 5 72432242 72481714 - MGP_129S1SvImJ_P0072043 Nfxl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072044.1 MGP_129S1SvImJ_G0029612.1 mouse_genomes_project 5 72432453 72435796 - Nfxl1 protein_coding retained_intron MGP_129S1SvImJ_T0072045.1 MGP_129S1SvImJ_G0029612.1 mouse_genomes_project 5 72435354 72443150 - Nfxl1 protein_coding retained_intron MGP_129S1SvImJ_T0072046.1 MGP_129S1SvImJ_G0029612.1 mouse_genomes_project 5 72442690 72447652 - Nfxl1 protein_coding retained_intron MGP_129S1SvImJ_T0072047.1 MGP_129S1SvImJ_G0029612.1 mouse_genomes_project 5 72464491 72481668 - MGP_129S1SvImJ_P0072047 Nfxl1 protein_coding protein_coding MGP_129S1SvImJ_T0072048.1 MGP_129S1SvImJ_G0029612.1 mouse_genomes_project 5 72472292 72481481 - Nfxl1 protein_coding retained_intron MGP_129S1SvImJ_T0072049.1 MGP_129S1SvImJ_G0029612.1 mouse_genomes_project 5 72472294 72481717 - Nfxl1 protein_coding retained_intron MGP_129S1SvImJ_T0072050.1 MGP_129S1SvImJ_G0029612.1 mouse_genomes_project 5 72477522 72481692 - Nfxl1 protein_coding retained_intron MGP_129S1SvImJ_T0101202.1 MGP_129S1SvImJ_G0039269.1 mouse_genomes_project 5 88721184 88721307 - Gm24314 snoRNA snoRNA MGP_129S1SvImJ_T0073808.1 MGP_129S1SvImJ_G0029987.1 mouse_genomes_project 5 120441830 120453587 + Wsb2 protein_coding retained_intron MGP_129S1SvImJ_T0073809.1 MGP_129S1SvImJ_G0029987.1 mouse_genomes_project 5 120441830 120466721 + MGP_129S1SvImJ_P0073809 Wsb2 protein_coding protein_coding MGP_129S1SvImJ_T0073810.1 MGP_129S1SvImJ_G0029987.1 mouse_genomes_project 5 120447857 120457736 + Wsb2 protein_coding processed_transcript MGP_129S1SvImJ_T0072124.1 MGP_129S1SvImJ_G0029626.1 mouse_genomes_project 5 73495195 73577065 + MGP_129S1SvImJ_P0072124 Dcun1d4 protein_coding protein_coding MGP_129S1SvImJ_T0072125.1 MGP_129S1SvImJ_G0029626.1 mouse_genomes_project 5 73498631 73573556 + Dcun1d4 protein_coding processed_transcript MGP_129S1SvImJ_T0072126.1 MGP_129S1SvImJ_G0029626.1 mouse_genomes_project 5 73505212 73577065 + MGP_129S1SvImJ_P0072126 Dcun1d4 protein_coding protein_coding MGP_129S1SvImJ_T0072127.1 MGP_129S1SvImJ_G0029626.1 mouse_genomes_project 5 73505254 73560317 + MGP_129S1SvImJ_P0072127 Dcun1d4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072128.1 MGP_129S1SvImJ_G0029626.1 mouse_genomes_project 5 73505310 73547777 + MGP_129S1SvImJ_P0072128 Dcun1d4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072129.1 MGP_129S1SvImJ_G0029626.1 mouse_genomes_project 5 73505354 73577058 + MGP_129S1SvImJ_P0072129 Dcun1d4 protein_coding protein_coding MGP_129S1SvImJ_T0072130.1 MGP_129S1SvImJ_G0029626.1 mouse_genomes_project 5 73506715 73534630 + Dcun1d4 protein_coding processed_transcript MGP_129S1SvImJ_T0072131.1 MGP_129S1SvImJ_G0029626.1 mouse_genomes_project 5 73525684 73550960 + MGP_129S1SvImJ_P0072131 Dcun1d4 protein_coding protein_coding MGP_129S1SvImJ_T0001885.1 MGP_129S1SvImJ_G0001799.1 mouse_genomes_project 5 136453049 136454379 - TEC TEC MGP_129S1SvImJ_T0001784.1 MGP_129S1SvImJ_G0001699.1 mouse_genomes_project 5 115237968 115239269 + TEC TEC MGP_129S1SvImJ_T0071400.1 MGP_129S1SvImJ_G0029502.1 mouse_genomes_project 5 35806835 36095669 - MGP_129S1SvImJ_P0071400 Stk32b protein_coding protein_coding MGP_129S1SvImJ_T0074922.1 MGP_129S1SvImJ_G0030181.1 mouse_genomes_project 5 139892183 139900351 + MGP_129S1SvImJ_P0074922 Nsun5 protein_coding protein_coding MGP_129S1SvImJ_T0074923.1 MGP_129S1SvImJ_G0030181.1 mouse_genomes_project 5 139892200 139893634 + Nsun5 protein_coding processed_transcript MGP_129S1SvImJ_T0074924.1 MGP_129S1SvImJ_G0030181.1 mouse_genomes_project 5 139892205 139897757 + MGP_129S1SvImJ_P0074924 Nsun5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074925.1 MGP_129S1SvImJ_G0030181.1 mouse_genomes_project 5 139892221 139897618 + MGP_129S1SvImJ_P0074925 Nsun5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074926.1 MGP_129S1SvImJ_G0030181.1 mouse_genomes_project 5 139892807 139894772 + Nsun5 protein_coding retained_intron MGP_129S1SvImJ_T0074927.1 MGP_129S1SvImJ_G0030181.1 mouse_genomes_project 5 139893157 139897637 + Nsun5 protein_coding retained_intron MGP_129S1SvImJ_T0074928.1 MGP_129S1SvImJ_G0030181.1 mouse_genomes_project 5 139893289 139894039 + Nsun5 protein_coding retained_intron MGP_129S1SvImJ_T0074929.1 MGP_129S1SvImJ_G0030181.1 mouse_genomes_project 5 139897194 139900358 + Nsun5 protein_coding retained_intron MGP_129S1SvImJ_T0074930.1 MGP_129S1SvImJ_G0030181.1 mouse_genomes_project 5 139897731 139899696 + Nsun5 protein_coding retained_intron MGP_129S1SvImJ_T0072028.1 MGP_129S1SvImJ_G0029609.1 mouse_genomes_project 5 71543521 72020731 + MGP_129S1SvImJ_P0072028 Gabrb1 protein_coding protein_coding MGP_129S1SvImJ_T0072029.1 MGP_129S1SvImJ_G0029609.1 mouse_genomes_project 5 71587483 72052819 + MGP_129S1SvImJ_P0072029 Gabrb1 protein_coding protein_coding MGP_129S1SvImJ_T0102557.1 MGP_129S1SvImJ_G0040390.1 mouse_genomes_project 5 49098292 49255739 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0004660.1 MGP_129S1SvImJ_G0004040.1 mouse_genomes_project 5 19926779 19928456 + Gm16110 antisense antisense MGP_129S1SvImJ_T0073990.1 MGP_129S1SvImJ_G0030031.1 mouse_genomes_project 5 125010895 125041526 - MGP_129S1SvImJ_P0073990 Gm42878 protein_coding protein_coding MGP_129S1SvImJ_T0073991.1 MGP_129S1SvImJ_G0030031.1 mouse_genomes_project 5 125010895 125041526 - MGP_129S1SvImJ_P0073991 Gm42878 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0011627.1 MGP_129S1SvImJ_G0009743.1 mouse_genomes_project 5 114785544 114785618 - Gm27882 misc_RNA misc_RNA MGP_129S1SvImJ_T0073562.1 MGP_129S1SvImJ_G0029942.1 mouse_genomes_project 5 117436417 117457601 - MGP_129S1SvImJ_P0073562 Gltp protein_coding protein_coding MGP_129S1SvImJ_T0073563.1 MGP_129S1SvImJ_G0029942.1 mouse_genomes_project 5 117437101 117457558 - MGP_129S1SvImJ_P0073563 Gltp protein_coding protein_coding MGP_129S1SvImJ_T0073564.1 MGP_129S1SvImJ_G0029942.1 mouse_genomes_project 5 117437246 117457525 - MGP_129S1SvImJ_P0073564 Gltp protein_coding protein_coding MGP_129S1SvImJ_T0099898.1 MGP_129S1SvImJ_G0037965.1 mouse_genomes_project 5 6180173 6180340 + Gm24666 snRNA snRNA MGP_129S1SvImJ_T0001867.1 MGP_129S1SvImJ_G0001781.1 mouse_genomes_project 5 135066609 135069999 - TEC TEC MGP_129S1SvImJ_T0074068.1 MGP_129S1SvImJ_G0030041.1 mouse_genomes_project 5 125706127 125710445 + MGP_129S1SvImJ_P0074068 Myl2 protein_coding protein_coding MGP_129S1SvImJ_T0074069.1 MGP_129S1SvImJ_G0030041.1 mouse_genomes_project 5 125706197 125712008 + MGP_129S1SvImJ_P0074069 Myl2 protein_coding protein_coding MGP_129S1SvImJ_T0074070.1 MGP_129S1SvImJ_G0030041.1 mouse_genomes_project 5 125706202 125710188 + MGP_129S1SvImJ_P0074070 Myl2 protein_coding protein_coding MGP_129S1SvImJ_T0074071.1 MGP_129S1SvImJ_G0030041.1 mouse_genomes_project 5 125706331 125707924 + Myl2 protein_coding processed_transcript MGP_129S1SvImJ_T0074072.1 MGP_129S1SvImJ_G0030041.1 mouse_genomes_project 5 125706750 125709080 + MGP_129S1SvImJ_P0074072 Myl2 protein_coding protein_coding MGP_129S1SvImJ_T0074073.1 MGP_129S1SvImJ_G0030041.1 mouse_genomes_project 5 125706967 125709858 + MGP_129S1SvImJ_P0074073 Myl2 protein_coding protein_coding MGP_129S1SvImJ_T0074074.1 MGP_129S1SvImJ_G0030041.1 mouse_genomes_project 5 125708350 125712000 + Myl2 protein_coding processed_transcript MGP_129S1SvImJ_T0074075.1 MGP_129S1SvImJ_G0030041.1 mouse_genomes_project 5 125708352 125712006 + Myl2 protein_coding processed_transcript MGP_129S1SvImJ_T0074076.1 MGP_129S1SvImJ_G0030041.1 mouse_genomes_project 5 125709064 125710155 + MGP_129S1SvImJ_P0074076 Myl2 protein_coding protein_coding MGP_129S1SvImJ_T0015098.1 MGP_129S1SvImJ_G0013187.1 mouse_genomes_project 5 99503747 99504743 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0071321.1 MGP_129S1SvImJ_G0029490.1 mouse_genomes_project 5 34820666 34824251 + MGP_129S1SvImJ_P0071321 Ccdc96 protein_coding protein_coding MGP_129S1SvImJ_T0008455.1 MGP_129S1SvImJ_G0006861.1 mouse_genomes_project 5 153657852 153665861 - Gm15721 lincRNA lincRNA MGP_129S1SvImJ_T0001670.1 MGP_129S1SvImJ_G0001586.1 mouse_genomes_project 5 65934097 65937047 + TEC TEC MGP_129S1SvImJ_T0015014.1 MGP_129S1SvImJ_G0013103.1 mouse_genomes_project 5 59615648 59616282 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014879.1 MGP_129S1SvImJ_G0012968.1 mouse_genomes_project 5 7786257 7786726 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001739.1 MGP_129S1SvImJ_G0001654.1 mouse_genomes_project 5 94406175 94408079 - TEC TEC MGP_129S1SvImJ_T0015138.1 MGP_129S1SvImJ_G0013227.1 mouse_genomes_project 5 111170948 111171322 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015011.1 MGP_129S1SvImJ_G0013100.1 mouse_genomes_project 5 59170586 59170998 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001650.1 MGP_129S1SvImJ_G0001566.1 mouse_genomes_project 5 65040324 65041091 + TEC TEC MGP_129S1SvImJ_T0098963.1 MGP_129S1SvImJ_G0037041.1 mouse_genomes_project 5 119586516 119588496 - sense_intronic sense_intronic MGP_129S1SvImJ_T0015235.1 MGP_129S1SvImJ_G0013324.1 mouse_genomes_project 5 153105850 153106072 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0074610.1 MGP_129S1SvImJ_G0030126.1 mouse_genomes_project 5 133695409 133721912 + MGP_129S1SvImJ_P0074610 Mmp17 protein_coding protein_coding MGP_129S1SvImJ_T0074611.1 MGP_129S1SvImJ_G0030126.1 mouse_genomes_project 5 133707558 133713423 + Mmp17 protein_coding retained_intron MGP_129S1SvImJ_T0071995.1 MGP_129S1SvImJ_G0029603.1 mouse_genomes_project 5 69400894 69418543 + MGP_129S1SvImJ_P0071995 Guf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071996.1 MGP_129S1SvImJ_G0029603.1 mouse_genomes_project 5 69400924 69410674 + Guf1 protein_coding retained_intron MGP_129S1SvImJ_T0071997.1 MGP_129S1SvImJ_G0029603.1 mouse_genomes_project 5 69400924 69410834 + MGP_129S1SvImJ_P0071997 Guf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071998.1 MGP_129S1SvImJ_G0029603.1 mouse_genomes_project 5 69400932 69419917 + MGP_129S1SvImJ_P0071998 Guf1 protein_coding protein_coding MGP_129S1SvImJ_T0071999.1 MGP_129S1SvImJ_G0029603.1 mouse_genomes_project 5 69400959 69418544 + MGP_129S1SvImJ_P0071999 Guf1 protein_coding protein_coding MGP_129S1SvImJ_T0072000.1 MGP_129S1SvImJ_G0029603.1 mouse_genomes_project 5 69401044 69411690 + MGP_129S1SvImJ_P0072000 Guf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072001.1 MGP_129S1SvImJ_G0029603.1 mouse_genomes_project 5 69401065 69418588 + MGP_129S1SvImJ_P0072001 Guf1 protein_coding protein_coding MGP_129S1SvImJ_T0072002.1 MGP_129S1SvImJ_G0029603.1 mouse_genomes_project 5 69410688 69422782 + Guf1 protein_coding retained_intron MGP_129S1SvImJ_T0072003.1 MGP_129S1SvImJ_G0029603.1 mouse_genomes_project 5 69415070 69418296 + Guf1 protein_coding retained_intron MGP_129S1SvImJ_T0001468.1 MGP_129S1SvImJ_G0001389.1 mouse_genomes_project 5 9704180 9708512 + TEC TEC MGP_129S1SvImJ_T0098951.1 MGP_129S1SvImJ_G0037029.1 mouse_genomes_project 5 28770197 28774287 + Gm19409 sense_intronic sense_intronic MGP_129S1SvImJ_T0001692.1 MGP_129S1SvImJ_G0001608.1 mouse_genomes_project 5 69006664 69008241 - TEC TEC MGP_129S1SvImJ_T0073667.1 MGP_129S1SvImJ_G0029963.1 mouse_genomes_project 5 118127707 118146407 + MGP_129S1SvImJ_P0073667 Coq5 protein_coding protein_coding MGP_129S1SvImJ_T0073668.1 MGP_129S1SvImJ_G0029963.1 mouse_genomes_project 5 118127736 118128825 + Coq5 protein_coding retained_intron MGP_129S1SvImJ_T0073669.1 MGP_129S1SvImJ_G0029963.1 mouse_genomes_project 5 118133753 118145744 + MGP_129S1SvImJ_P0073669 Coq5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0010711.1 MGP_129S1SvImJ_G0008827.1 mouse_genomes_project 5 83464647 83464803 - Mir1187 miRNA miRNA MGP_129S1SvImJ_T0014873.1 MGP_129S1SvImJ_G0012962.1 mouse_genomes_project 5 5017732 5018147 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072630.1 MGP_129S1SvImJ_G0029747.1 mouse_genomes_project 5 93460372 93489233 - MGP_129S1SvImJ_P0072630 Sdad1 protein_coding protein_coding MGP_129S1SvImJ_T0072631.1 MGP_129S1SvImJ_G0029747.1 mouse_genomes_project 5 93463104 93489103 - MGP_129S1SvImJ_P0072631 Sdad1 protein_coding protein_coding MGP_129S1SvImJ_T0072632.1 MGP_129S1SvImJ_G0029747.1 mouse_genomes_project 5 93470037 93475351 - Sdad1 protein_coding retained_intron MGP_129S1SvImJ_T0072633.1 MGP_129S1SvImJ_G0029747.1 mouse_genomes_project 5 93470864 93479479 - Sdad1 protein_coding retained_intron MGP_129S1SvImJ_T0072634.1 MGP_129S1SvImJ_G0029747.1 mouse_genomes_project 5 93480797 93489198 - Sdad1 protein_coding retained_intron MGP_129S1SvImJ_T0072635.1 MGP_129S1SvImJ_G0029747.1 mouse_genomes_project 5 93482818 93483862 - Sdad1 protein_coding retained_intron MGP_129S1SvImJ_T0072636.1 MGP_129S1SvImJ_G0029747.1 mouse_genomes_project 5 93484938 93489689 - MGP_129S1SvImJ_P0072636 Sdad1 protein_coding protein_coding MGP_129S1SvImJ_T0072755.1 MGP_129S1SvImJ_G0029771.1 mouse_genomes_project 5 99208022 99366519 - MGP_129S1SvImJ_P0072755 Antxr2 protein_coding protein_coding MGP_129S1SvImJ_T0072756.1 MGP_129S1SvImJ_G0029771.1 mouse_genomes_project 5 99247202 99366600 - MGP_129S1SvImJ_P0072756 Antxr2 protein_coding protein_coding MGP_129S1SvImJ_T0072757.1 MGP_129S1SvImJ_G0029771.1 mouse_genomes_project 5 99290944 99334725 - Antxr2 protein_coding processed_transcript MGP_129S1SvImJ_T0011616.1 MGP_129S1SvImJ_G0009732.1 mouse_genomes_project 5 90701442 90701766 + Gm25320 misc_RNA misc_RNA MGP_129S1SvImJ_T0074813.1 MGP_129S1SvImJ_G0030159.1 mouse_genomes_project 5 138998342 139010061 + Rfc2 protein_coding processed_transcript MGP_129S1SvImJ_T0074814.1 MGP_129S1SvImJ_G0030159.1 mouse_genomes_project 5 138999664 139022153 + MGP_129S1SvImJ_P0074814 Rfc2 protein_coding protein_coding MGP_129S1SvImJ_T0074815.1 MGP_129S1SvImJ_G0030159.1 mouse_genomes_project 5 138999731 139010498 + Rfc2 protein_coding retained_intron MGP_129S1SvImJ_T0074816.1 MGP_129S1SvImJ_G0030159.1 mouse_genomes_project 5 139010383 139016819 + MGP_129S1SvImJ_P0074816 Rfc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074817.1 MGP_129S1SvImJ_G0030159.1 mouse_genomes_project 5 139011568 139014176 + Rfc2 protein_coding retained_intron MGP_129S1SvImJ_T0074818.1 MGP_129S1SvImJ_G0030159.1 mouse_genomes_project 5 139012982 139017192 + Rfc2 protein_coding retained_intron MGP_129S1SvImJ_T0075051.1 MGP_129S1SvImJ_G0030205.1 mouse_genomes_project 5 140855866 140889281 - MGP_129S1SvImJ_P0075051 Sh2b2 protein_coding protein_coding MGP_129S1SvImJ_T0075052.1 MGP_129S1SvImJ_G0030205.1 mouse_genomes_project 5 140855868 140889330 - MGP_129S1SvImJ_P0075052 Sh2b2 protein_coding protein_coding MGP_129S1SvImJ_T0075053.1 MGP_129S1SvImJ_G0030205.1 mouse_genomes_project 5 140858086 140860382 - Sh2b2 protein_coding retained_intron MGP_129S1SvImJ_T0075054.1 MGP_129S1SvImJ_G0030205.1 mouse_genomes_project 5 140861488 140889264 - MGP_129S1SvImJ_P0075054 Sh2b2 protein_coding protein_coding MGP_129S1SvImJ_T0075055.1 MGP_129S1SvImJ_G0030205.1 mouse_genomes_project 5 140875100 140890983 - MGP_129S1SvImJ_P0075055 Sh2b2 protein_coding protein_coding MGP_129S1SvImJ_T0004912.1 MGP_129S1SvImJ_G0004222.1 mouse_genomes_project 5 155103544 155108661 - Gm19719 antisense antisense MGP_129S1SvImJ_T0075247.1 MGP_129S1SvImJ_G0030240.1 mouse_genomes_project 5 142428661 142464979 - MGP_129S1SvImJ_P0075247 Agfg2 protein_coding protein_coding MGP_129S1SvImJ_T0075248.1 MGP_129S1SvImJ_G0030240.1 mouse_genomes_project 5 142428683 142464933 - MGP_129S1SvImJ_P0075248 Agfg2 protein_coding protein_coding MGP_129S1SvImJ_T0075249.1 MGP_129S1SvImJ_G0030240.1 mouse_genomes_project 5 142428988 142439952 - Agfg2 protein_coding retained_intron MGP_129S1SvImJ_T0075250.1 MGP_129S1SvImJ_G0030240.1 mouse_genomes_project 5 142432006 142464979 - MGP_129S1SvImJ_P0075250 Agfg2 protein_coding protein_coding MGP_129S1SvImJ_T0075251.1 MGP_129S1SvImJ_G0030240.1 mouse_genomes_project 5 142433779 142442515 - MGP_129S1SvImJ_P0075251 Agfg2 protein_coding protein_coding MGP_129S1SvImJ_T0075252.1 MGP_129S1SvImJ_G0030240.1 mouse_genomes_project 5 142441008 142464946 - Agfg2 protein_coding retained_intron MGP_129S1SvImJ_T0071478.1 MGP_129S1SvImJ_G0029516.1 mouse_genomes_project 5 38083413 38229652 - MGP_129S1SvImJ_P0071478 Hs3st1 protein_coding protein_coding MGP_129S1SvImJ_T0071479.1 MGP_129S1SvImJ_G0029516.1 mouse_genomes_project 5 38083417 38116970 - MGP_129S1SvImJ_P0071479 Hs3st1 protein_coding protein_coding MGP_129S1SvImJ_T0071480.1 MGP_129S1SvImJ_G0029516.1 mouse_genomes_project 5 38084247 38117582 - MGP_129S1SvImJ_P0071480 Hs3st1 protein_coding protein_coding MGP_129S1SvImJ_T0071481.1 MGP_129S1SvImJ_G0029516.1 mouse_genomes_project 5 38084552 38116933 - MGP_129S1SvImJ_P0071481 Hs3st1 protein_coding protein_coding MGP_129S1SvImJ_T0072484.1 MGP_129S1SvImJ_G0029708.1 mouse_genomes_project 5 89519698 89526572 - Jchain protein_coding retained_intron MGP_129S1SvImJ_T0072485.1 MGP_129S1SvImJ_G0029708.1 mouse_genomes_project 5 89521198 89528343 - MGP_129S1SvImJ_P0072485 Jchain protein_coding unknown_likely_coding MGP_129S1SvImJ_T0101219.1 MGP_129S1SvImJ_G0039286.1 mouse_genomes_project 5 133915820 133915951 + Snora15 snoRNA snoRNA MGP_129S1SvImJ_T0010708.1 MGP_129S1SvImJ_G0008824.1 mouse_genomes_project 5 76078634 76078735 + Gm25374 miRNA miRNA MGP_129S1SvImJ_T0101178.1 MGP_129S1SvImJ_G0039245.1 mouse_genomes_project 5 19950830 19950944 - Gm25459 snoRNA snoRNA MGP_129S1SvImJ_T0008150.1 MGP_129S1SvImJ_G0006647.1 mouse_genomes_project 5 57786707 57788961 + 1700029E06Rik lincRNA lincRNA MGP_129S1SvImJ_T0015232.1 MGP_129S1SvImJ_G0013321.1 mouse_genomes_project 5 152731934 152732426 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075898.1 MGP_129S1SvImJ_G0030380.1 mouse_genomes_project 5 152456034 152458691 + MGP_129S1SvImJ_P0075898 Rasl11a protein_coding protein_coding MGP_129S1SvImJ_T0075899.1 MGP_129S1SvImJ_G0030380.1 mouse_genomes_project 5 152456728 152458346 + Rasl11a protein_coding retained_intron MGP_129S1SvImJ_T0004687.1 MGP_129S1SvImJ_G0004063.1 mouse_genomes_project 5 34022851 34024782 + Gm15650 antisense antisense MGP_129S1SvImJ_T0071034.1 MGP_129S1SvImJ_G0029445.1 mouse_genomes_project 5 31550647 31584684 + Uvssa protein_coding retained_intron MGP_129S1SvImJ_T0071035.1 MGP_129S1SvImJ_G0029445.1 mouse_genomes_project 5 31550794 31593914 + MGP_129S1SvImJ_P0071035 Uvssa protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071036.1 MGP_129S1SvImJ_G0029445.1 mouse_genomes_project 5 31550794 31593914 + MGP_129S1SvImJ_P0071036 Uvssa protein_coding protein_coding MGP_129S1SvImJ_T0071037.1 MGP_129S1SvImJ_G0029445.1 mouse_genomes_project 5 31550870 31593914 + MGP_129S1SvImJ_P0071037 Uvssa protein_coding protein_coding MGP_129S1SvImJ_T0004834.1 MGP_129S1SvImJ_G0004167.1 mouse_genomes_project 5 124859231 124870266 + Gm42917 antisense antisense MGP_129S1SvImJ_T0015158.1 MGP_129S1SvImJ_G0013247.1 mouse_genomes_project 5 118038549 118038912 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004712.1 MGP_129S1SvImJ_G0004080.1 mouse_genomes_project 5 51415809 51417784 + Gm43683 antisense antisense MGP_129S1SvImJ_T0008094.1 MGP_129S1SvImJ_G0006606.1 mouse_genomes_project 5 29596819 29598620 - AI839979 lincRNA lincRNA MGP_129S1SvImJ_T0008095.1 MGP_129S1SvImJ_G0006606.1 mouse_genomes_project 5 29597328 29598614 - AI839979 lincRNA lincRNA MGP_129S1SvImJ_T0011630.1 MGP_129S1SvImJ_G0009746.1 mouse_genomes_project 5 121370069 121370359 - Gm24050 misc_RNA misc_RNA MGP_129S1SvImJ_T0070677.1 MGP_129S1SvImJ_G0029392.1 mouse_genomes_project 5 28541571 28581540 + MGP_129S1SvImJ_P0070677 Kcnk3 protein_coding protein_coding MGP_129S1SvImJ_T0070678.1 MGP_129S1SvImJ_G0029392.1 mouse_genomes_project 5 28577647 28578507 + Kcnk3 protein_coding processed_transcript MGP_129S1SvImJ_T0008298.1 MGP_129S1SvImJ_G0006754.1 mouse_genomes_project 5 114267381 114272585 + Gm16019 lincRNA lincRNA MGP_129S1SvImJ_T0015048.1 MGP_129S1SvImJ_G0013137.1 mouse_genomes_project 5 74988187 74989088 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008149.1 MGP_129S1SvImJ_G0006646.1 mouse_genomes_project 5 57776844 57786668 - 4930459L07Rik lincRNA lincRNA MGP_129S1SvImJ_T0101180.1 MGP_129S1SvImJ_G0039247.1 mouse_genomes_project 5 21542632 21542703 + snoRNA snoRNA MGP_129S1SvImJ_T0014959.1 MGP_129S1SvImJ_G0013048.1 mouse_genomes_project 5 31423887 31424929 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101176.1 MGP_129S1SvImJ_G0039243.1 mouse_genomes_project 5 17604934 17605062 - Gm25761 snoRNA snoRNA MGP_129S1SvImJ_T0001762.1 MGP_129S1SvImJ_G0001677.1 mouse_genomes_project 5 106110132 106111384 + TEC TEC MGP_129S1SvImJ_T0072495.1 MGP_129S1SvImJ_G0029711.1 mouse_genomes_project 5 89661906 89680115 - MGP_129S1SvImJ_P0072495 Grsf1 protein_coding protein_coding MGP_129S1SvImJ_T0072496.1 MGP_129S1SvImJ_G0029711.1 mouse_genomes_project 5 89664336 89680789 - MGP_129S1SvImJ_P0072496 Grsf1 protein_coding protein_coding MGP_129S1SvImJ_T0072497.1 MGP_129S1SvImJ_G0029711.1 mouse_genomes_project 5 89667423 89676199 - Grsf1 protein_coding retained_intron MGP_129S1SvImJ_T0072498.1 MGP_129S1SvImJ_G0029711.1 mouse_genomes_project 5 89678325 89679817 - Grsf1 protein_coding processed_transcript MGP_129S1SvImJ_T0073128.1 MGP_129S1SvImJ_G0029852.1 mouse_genomes_project 5 110361927 110373484 + MGP_129S1SvImJ_P0073128 Dr1 protein_coding protein_coding MGP_129S1SvImJ_T0073129.1 MGP_129S1SvImJ_G0029852.1 mouse_genomes_project 5 110369882 110371573 + Dr1 protein_coding processed_transcript MGP_129S1SvImJ_T0072875.1 MGP_129S1SvImJ_G0029795.1 mouse_genomes_project 5 103230060 103236887 - MGP_129S1SvImJ_P0072875 Nkx6-1 protein_coding protein_coding MGP_129S1SvImJ_T0004646.1 MGP_129S1SvImJ_G0004027.1 mouse_genomes_project 5 398170 399433 + 2510017J16Rik antisense antisense MGP_129S1SvImJ_T0015219.1 MGP_129S1SvImJ_G0013308.1 mouse_genomes_project 5 149753854 149754067 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001635.1 MGP_129S1SvImJ_G0001552.1 mouse_genomes_project 5 57292294 57293349 + TEC TEC MGP_129S1SvImJ_T0001602.1 MGP_129S1SvImJ_G0001519.1 mouse_genomes_project 5 48817774 48818924 - TEC TEC MGP_129S1SvImJ_T0070062.1 MGP_129S1SvImJ_G0029273.1 mouse_genomes_project 5 2439722 2461348 - MGP_129S1SvImJ_P0070062 Gtpbp10 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0070063.1 MGP_129S1SvImJ_G0029273.1 mouse_genomes_project 5 2441624 2461396 - MGP_129S1SvImJ_P0070063 Gtpbp10 protein_coding protein_coding MGP_129S1SvImJ_T0070064.1 MGP_129S1SvImJ_G0029273.1 mouse_genomes_project 5 2444075 2446365 - Gtpbp10 protein_coding retained_intron MGP_129S1SvImJ_T0070065.1 MGP_129S1SvImJ_G0029273.1 mouse_genomes_project 5 2444095 2445620 - Gtpbp10 protein_coding retained_intron MGP_129S1SvImJ_T0070066.1 MGP_129S1SvImJ_G0029273.1 mouse_genomes_project 5 2444512 2459125 - MGP_129S1SvImJ_P0070066 Gtpbp10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070067.1 MGP_129S1SvImJ_G0029273.1 mouse_genomes_project 5 2446239 2461344 - MGP_129S1SvImJ_P0070067 Gtpbp10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070068.1 MGP_129S1SvImJ_G0029273.1 mouse_genomes_project 5 2446283 2457637 - Gtpbp10 protein_coding retained_intron MGP_129S1SvImJ_T0070069.1 MGP_129S1SvImJ_G0029273.1 mouse_genomes_project 5 2446320 2449442 - Gtpbp10 protein_coding retained_intron MGP_129S1SvImJ_T0070070.1 MGP_129S1SvImJ_G0029273.1 mouse_genomes_project 5 2448523 2461365 - MGP_129S1SvImJ_P0070070 Gtpbp10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070071.1 MGP_129S1SvImJ_G0029273.1 mouse_genomes_project 5 2460751 2461399 - MGP_129S1SvImJ_P0070071 Gtpbp10 protein_coding protein_coding MGP_129S1SvImJ_T0014946.1 MGP_129S1SvImJ_G0013035.1 mouse_genomes_project 5 27799063 27800283 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102579.1 MGP_129S1SvImJ_G0040412.1 mouse_genomes_project 5 141709342 141712920 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0008070.1 MGP_129S1SvImJ_G0006590.1 mouse_genomes_project 5 21045726 21083465 - 5031425E22Rik lincRNA lincRNA MGP_129S1SvImJ_T0008071.1 MGP_129S1SvImJ_G0006590.1 mouse_genomes_project 5 21081922 21084048 - 5031425E22Rik lincRNA lincRNA MGP_129S1SvImJ_T0008072.1 MGP_129S1SvImJ_G0006590.1 mouse_genomes_project 5 21082399 21084398 - 5031425E22Rik lincRNA lincRNA MGP_129S1SvImJ_T0075026.1 MGP_129S1SvImJ_G0030200.1 mouse_genomes_project 5 140741800 140748112 + MGP_129S1SvImJ_P0075026 Polr2j protein_coding protein_coding MGP_129S1SvImJ_T0075027.1 MGP_129S1SvImJ_G0030200.1 mouse_genomes_project 5 140741800 140747888 + MGP_129S1SvImJ_P0075027 Polr2j protein_coding protein_coding MGP_129S1SvImJ_T0075028.1 MGP_129S1SvImJ_G0030200.1 mouse_genomes_project 5 140741871 140748101 + MGP_129S1SvImJ_P0075028 Polr2j protein_coding protein_coding MGP_129S1SvImJ_T0099913.1 MGP_129S1SvImJ_G0037980.1 mouse_genomes_project 5 32774361 32774466 + Gm22847 snRNA snRNA MGP_129S1SvImJ_T0001686.1 MGP_129S1SvImJ_G0001602.1 mouse_genomes_project 5 67543650 67545405 - TEC TEC MGP_129S1SvImJ_T0072345.1 MGP_129S1SvImJ_G0029662.1 mouse_genomes_project 5 84754572 85166284 - MGP_129S1SvImJ_P0072345 Epha5 protein_coding protein_coding MGP_129S1SvImJ_T0072346.1 MGP_129S1SvImJ_G0029662.1 mouse_genomes_project 5 84757602 85166169 - MGP_129S1SvImJ_P0072346 Epha5 protein_coding protein_coding MGP_129S1SvImJ_T0072347.1 MGP_129S1SvImJ_G0029662.1 mouse_genomes_project 5 84757602 85166169 - MGP_129S1SvImJ_P0072347 Epha5 protein_coding protein_coding MGP_129S1SvImJ_T0072348.1 MGP_129S1SvImJ_G0029662.1 mouse_genomes_project 5 84765279 85166722 - MGP_129S1SvImJ_P0072348 Epha5 protein_coding protein_coding MGP_129S1SvImJ_T0072349.1 MGP_129S1SvImJ_G0029662.1 mouse_genomes_project 5 84765279 85166169 - MGP_129S1SvImJ_P0072349 Epha5 protein_coding protein_coding MGP_129S1SvImJ_T0072350.1 MGP_129S1SvImJ_G0029662.1 mouse_genomes_project 5 84765279 85166169 - MGP_129S1SvImJ_P0072350 Epha5 protein_coding protein_coding MGP_129S1SvImJ_T0072351.1 MGP_129S1SvImJ_G0029662.1 mouse_genomes_project 5 84810097 85166284 - Epha5 protein_coding retained_intron MGP_129S1SvImJ_T0072352.1 MGP_129S1SvImJ_G0029662.1 mouse_genomes_project 5 84860181 85166284 - Epha5 protein_coding retained_intron MGP_129S1SvImJ_T0072353.1 MGP_129S1SvImJ_G0029662.1 mouse_genomes_project 5 84963902 85166745 - Epha5 protein_coding retained_intron MGP_129S1SvImJ_T0072354.1 MGP_129S1SvImJ_G0029662.1 mouse_genomes_project 5 85067318 85166745 - Epha5 protein_coding retained_intron MGP_129S1SvImJ_T0072355.1 MGP_129S1SvImJ_G0029662.1 mouse_genomes_project 5 85097725 85101374 - Epha5 protein_coding retained_intron MGP_129S1SvImJ_T0072215.1 MGP_129S1SvImJ_G0029642.1 mouse_genomes_project 5 76386416 76476727 - MGP_129S1SvImJ_P0072215 Clock protein_coding protein_coding MGP_129S1SvImJ_T0072216.1 MGP_129S1SvImJ_G0029642.1 mouse_genomes_project 5 76388696 76476483 - MGP_129S1SvImJ_P0072216 Clock protein_coding protein_coding MGP_129S1SvImJ_T0072217.1 MGP_129S1SvImJ_G0029642.1 mouse_genomes_project 5 76390372 76446342 - MGP_129S1SvImJ_P0072217 Clock protein_coding protein_coding MGP_129S1SvImJ_T0072218.1 MGP_129S1SvImJ_G0029642.1 mouse_genomes_project 5 76404078 76476689 - Clock protein_coding retained_intron MGP_129S1SvImJ_T0072219.1 MGP_129S1SvImJ_G0029642.1 mouse_genomes_project 5 76424110 76476707 - Clock protein_coding processed_transcript MGP_129S1SvImJ_T0072220.1 MGP_129S1SvImJ_G0029642.1 mouse_genomes_project 5 76444283 76476707 - Clock protein_coding retained_intron MGP_129S1SvImJ_T0073067.1 MGP_129S1SvImJ_G0029843.1 mouse_genomes_project 5 109639543 109710451 + MGP_129S1SvImJ_P0073067 Rpap2 protein_coding protein_coding MGP_129S1SvImJ_T0073068.1 MGP_129S1SvImJ_G0029843.1 mouse_genomes_project 5 109639564 109688164 + MGP_129S1SvImJ_P0073068 Rpap2 protein_coding protein_coding MGP_129S1SvImJ_T0073069.1 MGP_129S1SvImJ_G0029843.1 mouse_genomes_project 5 109639567 109643805 + Rpap2 protein_coding processed_transcript MGP_129S1SvImJ_T0073070.1 MGP_129S1SvImJ_G0029843.1 mouse_genomes_project 5 109639620 109688164 + MGP_129S1SvImJ_P0073070 Rpap2 protein_coding protein_coding MGP_129S1SvImJ_T0073071.1 MGP_129S1SvImJ_G0029843.1 mouse_genomes_project 5 109639634 109710455 + MGP_129S1SvImJ_P0073071 Rpap2 protein_coding protein_coding MGP_129S1SvImJ_T0073072.1 MGP_129S1SvImJ_G0029843.1 mouse_genomes_project 5 109639807 109643633 + MGP_129S1SvImJ_P0073072 Rpap2 protein_coding protein_coding MGP_129S1SvImJ_T0073073.1 MGP_129S1SvImJ_G0029843.1 mouse_genomes_project 5 109639828 109648805 + MGP_129S1SvImJ_P0073073 Rpap2 protein_coding protein_coding MGP_129S1SvImJ_T0001623.1 MGP_129S1SvImJ_G0001540.1 mouse_genomes_project 5 56732548 56735200 + TEC TEC MGP_129S1SvImJ_T0015061.1 MGP_129S1SvImJ_G0013150.1 mouse_genomes_project 5 78852186 78853041 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102582.1 MGP_129S1SvImJ_G0040415.1 mouse_genomes_project 5 147797350 147797874 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0101185.1 MGP_129S1SvImJ_G0039252.1 mouse_genomes_project 5 55995450 55995580 + Gm23896 snoRNA snoRNA MGP_129S1SvImJ_T0008348.1 MGP_129S1SvImJ_G0006788.1 mouse_genomes_project 5 122780232 122791043 - Gm31314 lincRNA lincRNA MGP_129S1SvImJ_T0071779.1 MGP_129S1SvImJ_G0029569.1 mouse_genomes_project 5 64557977 64566588 - MGP_129S1SvImJ_P0071779 Tlr6 protein_coding protein_coding MGP_129S1SvImJ_T0071780.1 MGP_129S1SvImJ_G0029569.1 mouse_genomes_project 5 64561763 64566638 - MGP_129S1SvImJ_P0071780 Tlr6 protein_coding protein_coding MGP_129S1SvImJ_T0070240.1 MGP_129S1SvImJ_G0029301.1 mouse_genomes_project 5 14854001 14858439 + MGP_129S1SvImJ_P0070240 protein_coding protein_coding MGP_129S1SvImJ_T0073521.1 MGP_129S1SvImJ_G0029935.1 mouse_genomes_project 5 117014197 117098177 + MGP_129S1SvImJ_P0073521 Myo1h protein_coding protein_coding MGP_129S1SvImJ_T0073522.1 MGP_129S1SvImJ_G0029935.1 mouse_genomes_project 5 117045492 117097956 + MGP_129S1SvImJ_P0073522 Myo1h protein_coding protein_coding MGP_129S1SvImJ_T0073523.1 MGP_129S1SvImJ_G0029935.1 mouse_genomes_project 5 117045492 117099518 + MGP_129S1SvImJ_P0073523 Myo1h protein_coding protein_coding MGP_129S1SvImJ_T0073524.1 MGP_129S1SvImJ_G0029935.1 mouse_genomes_project 5 117091760 117099518 + Myo1h protein_coding retained_intron MGP_129S1SvImJ_T0073525.1 MGP_129S1SvImJ_G0029935.1 mouse_genomes_project 5 117091808 117098262 + Myo1h protein_coding retained_intron MGP_129S1SvImJ_T0073526.1 MGP_129S1SvImJ_G0029935.1 mouse_genomes_project 5 117091808 117098262 + MGP_129S1SvImJ_P0073526 Myo1h protein_coding protein_coding MGP_129S1SvImJ_T0073527.1 MGP_129S1SvImJ_G0029935.1 mouse_genomes_project 5 117091808 117098262 + MGP_129S1SvImJ_P0073527 Myo1h protein_coding protein_coding MGP_129S1SvImJ_T0073528.1 MGP_129S1SvImJ_G0029935.1 mouse_genomes_project 5 117091808 117098262 + MGP_129S1SvImJ_P0073528 Myo1h protein_coding protein_coding MGP_129S1SvImJ_T0073529.1 MGP_129S1SvImJ_G0029935.1 mouse_genomes_project 5 117092351 117094681 + Myo1h protein_coding retained_intron MGP_129S1SvImJ_T0073530.1 MGP_129S1SvImJ_G0029935.1 mouse_genomes_project 5 117098356 117100299 + Myo1h protein_coding processed_transcript MGP_129S1SvImJ_T0010719.1 MGP_129S1SvImJ_G0008835.1 mouse_genomes_project 5 105718042 105718103 + Mir5619 miRNA miRNA MGP_129S1SvImJ_T0072482.1 MGP_129S1SvImJ_G0029707.1 mouse_genomes_project 5 89485863 89504766 + MGP_129S1SvImJ_P0072482 Enam protein_coding protein_coding MGP_129S1SvImJ_T0072483.1 MGP_129S1SvImJ_G0029707.1 mouse_genomes_project 5 89485870 89506085 + MGP_129S1SvImJ_P0072483 Enam protein_coding protein_coding MGP_129S1SvImJ_T0075650.1 MGP_129S1SvImJ_G0030324.1 mouse_genomes_project 5 148535850 148544762 - MGP_129S1SvImJ_P0075650 Spdye4a protein_coding protein_coding MGP_129S1SvImJ_T0074292.1 MGP_129S1SvImJ_G0030075.1 mouse_genomes_project 5 127267568 127312660 - MGP_129S1SvImJ_P0074292 Vps33a protein_coding protein_coding MGP_129S1SvImJ_T0074293.1 MGP_129S1SvImJ_G0030075.1 mouse_genomes_project 5 127269944 127311653 - MGP_129S1SvImJ_P0074293 Vps33a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0074294.1 MGP_129S1SvImJ_G0030075.1 mouse_genomes_project 5 127294374 127298184 - Vps33a protein_coding retained_intron MGP_129S1SvImJ_T0074295.1 MGP_129S1SvImJ_G0030075.1 mouse_genomes_project 5 127302714 127308269 - Vps33a protein_coding retained_intron MGP_129S1SvImJ_T0074296.1 MGP_129S1SvImJ_G0030075.1 mouse_genomes_project 5 127304416 127312601 - MGP_129S1SvImJ_P0074296 Vps33a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0102575.1 MGP_129S1SvImJ_G0040408.1 mouse_genomes_project 5 111870144 111872357 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015020.1 MGP_129S1SvImJ_G0013109.1 mouse_genomes_project 5 61223535 61224172 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0074487.1 MGP_129S1SvImJ_G0030104.1 mouse_genomes_project 5 128503975 128618261 + MGP_129S1SvImJ_P0074487 Dnah10 protein_coding protein_coding MGP_129S1SvImJ_T0074488.1 MGP_129S1SvImJ_G0030104.1 mouse_genomes_project 5 128503975 128618266 + MGP_129S1SvImJ_P0074488 Dnah10 protein_coding protein_coding MGP_129S1SvImJ_T0074489.1 MGP_129S1SvImJ_G0030104.1 mouse_genomes_project 5 128568969 128569400 + Dnah10 protein_coding processed_transcript MGP_129S1SvImJ_T0074490.1 MGP_129S1SvImJ_G0030104.1 mouse_genomes_project 5 128573795 128578297 + Dnah10 protein_coding processed_transcript MGP_129S1SvImJ_T0074491.1 MGP_129S1SvImJ_G0030104.1 mouse_genomes_project 5 128583423 128586647 + Dnah10 protein_coding retained_intron MGP_129S1SvImJ_T0074492.1 MGP_129S1SvImJ_G0030104.1 mouse_genomes_project 5 128587298 128618083 + Dnah10 protein_coding retained_intron MGP_129S1SvImJ_T0018218.1 MGP_129S1SvImJ_G0015613.1 mouse_genomes_project 5 127146422 127151732 + Gm43813 processed_transcript TEC MGP_129S1SvImJ_T0018219.1 MGP_129S1SvImJ_G0015613.1 mouse_genomes_project 5 127146422 127149102 + Gm43813 processed_transcript sense_intronic MGP_129S1SvImJ_T0001715.1 MGP_129S1SvImJ_G0001630.1 mouse_genomes_project 5 74321634 74322100 - TEC TEC MGP_129S1SvImJ_T0071319.1 MGP_129S1SvImJ_G0029489.1 mouse_genomes_project 5 34806690 34818445 - MGP_129S1SvImJ_P0071319 Tada2b protein_coding protein_coding MGP_129S1SvImJ_T0071320.1 MGP_129S1SvImJ_G0029489.1 mouse_genomes_project 5 34810029 34818400 - MGP_129S1SvImJ_P0071320 Tada2b protein_coding protein_coding MGP_129S1SvImJ_T0015223.1 MGP_129S1SvImJ_G0013312.1 mouse_genomes_project 5 150847313 150847506 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0074282.1 MGP_129S1SvImJ_G0030073.1 mouse_genomes_project 5 127249406 127250829 + MGP_129S1SvImJ_P0074282 B3gnt4 protein_coding protein_coding MGP_129S1SvImJ_T0073773.1 MGP_129S1SvImJ_G0029979.1 mouse_genomes_project 5 118976726 119031776 - MGP_129S1SvImJ_P0073773 Tmem233 protein_coding protein_coding MGP_129S1SvImJ_T0015008.1 MGP_129S1SvImJ_G0013097.1 mouse_genomes_project 5 58342211 58342905 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004711.1 MGP_129S1SvImJ_G0004079.1 mouse_genomes_project 5 47397362 47406472 + Gm20700 antisense antisense MGP_129S1SvImJ_T0101179.1 MGP_129S1SvImJ_G0039246.1 mouse_genomes_project 5 21541911 21541982 + snoRNA snoRNA MGP_129S1SvImJ_T0008052.1 MGP_129S1SvImJ_G0006578.1 mouse_genomes_project 5 6287300 6289101 - Gm15734 lincRNA lincRNA MGP_129S1SvImJ_T0010709.1 MGP_129S1SvImJ_G0008825.1 mouse_genomes_project 5 77532277 77532359 + Mir5098 miRNA miRNA MGP_129S1SvImJ_T0004874.1 MGP_129S1SvImJ_G0004197.1 mouse_genomes_project 5 139459302 139473177 - Wbscr25 antisense antisense MGP_129S1SvImJ_T0004875.1 MGP_129S1SvImJ_G0004197.1 mouse_genomes_project 5 139464385 139472334 - Wbscr25 antisense antisense MGP_129S1SvImJ_T0072577.1 MGP_129S1SvImJ_G0029733.1 mouse_genomes_project 5 92011055 92019151 + Mthfd2l protein_coding processed_transcript MGP_129S1SvImJ_T0072578.1 MGP_129S1SvImJ_G0029733.1 mouse_genomes_project 5 92011194 92013361 + MGP_129S1SvImJ_P0072578 Mthfd2l protein_coding protein_coding MGP_129S1SvImJ_T0072579.1 MGP_129S1SvImJ_G0029733.1 mouse_genomes_project 5 92011218 92101280 + MGP_129S1SvImJ_P0072579 Mthfd2l protein_coding protein_coding MGP_129S1SvImJ_T0072580.1 MGP_129S1SvImJ_G0029733.1 mouse_genomes_project 5 92028101 92058378 + Mthfd2l protein_coding retained_intron MGP_129S1SvImJ_T0101186.1 MGP_129S1SvImJ_G0039253.1 mouse_genomes_project 5 56376052 56376175 + Gm24902 snoRNA snoRNA MGP_129S1SvImJ_T0074415.1 MGP_129S1SvImJ_G0030092.1 mouse_genomes_project 5 128131221 128144032 + MGP_129S1SvImJ_P0074415 2810006K23Rik protein_coding protein_coding MGP_129S1SvImJ_T0074416.1 MGP_129S1SvImJ_G0030092.1 mouse_genomes_project 5 128131230 128145754 + MGP_129S1SvImJ_P0074416 2810006K23Rik protein_coding protein_coding MGP_129S1SvImJ_T0008146.1 MGP_129S1SvImJ_G0006643.1 mouse_genomes_project 5 52313507 52315207 + lincRNA lincRNA MGP_129S1SvImJ_T0071312.1 MGP_129S1SvImJ_G0029486.1 mouse_genomes_project 5 34333362 34726955 - MGP_129S1SvImJ_P0071312 Sorcs2 protein_coding protein_coding MGP_129S1SvImJ_T0071313.1 MGP_129S1SvImJ_G0029486.1 mouse_genomes_project 5 34378173 34726938 - Sorcs2 protein_coding retained_intron MGP_129S1SvImJ_T0071314.1 MGP_129S1SvImJ_G0029486.1 mouse_genomes_project 5 34382500 34590763 - MGP_129S1SvImJ_P0071314 Sorcs2 protein_coding protein_coding MGP_129S1SvImJ_T0071315.1 MGP_129S1SvImJ_G0029486.1 mouse_genomes_project 5 34469981 34726970 - MGP_129S1SvImJ_P0071315 Sorcs2 protein_coding protein_coding MGP_129S1SvImJ_T0071316.1 MGP_129S1SvImJ_G0029486.1 mouse_genomes_project 5 34471011 34693839 - Sorcs2 protein_coding processed_transcript MGP_129S1SvImJ_T0075510.1 MGP_129S1SvImJ_G0030294.1 mouse_genomes_project 5 144930166 145009635 + MGP_129S1SvImJ_P0075510 Elfn1 protein_coding protein_coding MGP_129S1SvImJ_T0075511.1 MGP_129S1SvImJ_G0030294.1 mouse_genomes_project 5 144930697 145005953 + Elfn1 protein_coding processed_transcript MGP_129S1SvImJ_T0074920.1 MGP_129S1SvImJ_G0030180.1 mouse_genomes_project 5 139873368 139889885 + MGP_129S1SvImJ_P0074920 Trim50 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0074921.1 MGP_129S1SvImJ_G0030180.1 mouse_genomes_project 5 139874838 139890236 + MGP_129S1SvImJ_P0074921 Trim50 protein_coding protein_coding MGP_129S1SvImJ_T0075257.1 MGP_129S1SvImJ_G0030242.1 mouse_genomes_project 5 142536206 142559967 + MGP_129S1SvImJ_P0075257 Tsc22d4 protein_coding protein_coding MGP_129S1SvImJ_T0075258.1 MGP_129S1SvImJ_G0030242.1 mouse_genomes_project 5 142536435 142542691 + Tsc22d4 protein_coding retained_intron MGP_129S1SvImJ_T0075259.1 MGP_129S1SvImJ_G0030242.1 mouse_genomes_project 5 142536472 142551376 + MGP_129S1SvImJ_P0075259 Tsc22d4 protein_coding protein_coding MGP_129S1SvImJ_T0075260.1 MGP_129S1SvImJ_G0030242.1 mouse_genomes_project 5 142541152 142548868 + Tsc22d4 protein_coding retained_intron MGP_129S1SvImJ_T0075261.1 MGP_129S1SvImJ_G0030242.1 mouse_genomes_project 5 142548114 142549518 + MGP_129S1SvImJ_P0075261 Tsc22d4 protein_coding protein_coding MGP_129S1SvImJ_T0075262.1 MGP_129S1SvImJ_G0030242.1 mouse_genomes_project 5 142548154 142549402 + MGP_129S1SvImJ_P0075262 Tsc22d4 protein_coding protein_coding MGP_129S1SvImJ_T0075263.1 MGP_129S1SvImJ_G0030242.1 mouse_genomes_project 5 142551666 142559469 + MGP_129S1SvImJ_P0075263 Tsc22d4 protein_coding protein_coding MGP_129S1SvImJ_T0075264.1 MGP_129S1SvImJ_G0030242.1 mouse_genomes_project 5 142551677 142559469 + MGP_129S1SvImJ_P0075264 Tsc22d4 protein_coding protein_coding MGP_129S1SvImJ_T0075265.1 MGP_129S1SvImJ_G0030242.1 mouse_genomes_project 5 142558766 142559359 + Tsc22d4 protein_coding processed_transcript MGP_129S1SvImJ_T0074046.1 MGP_129S1SvImJ_G0030038.1 mouse_genomes_project 5 125387459 125408764 - MGP_129S1SvImJ_P0074046 Sh2b3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074047.1 MGP_129S1SvImJ_G0030038.1 mouse_genomes_project 5 125387619 125408798 - MGP_129S1SvImJ_P0074047 Sh2b3 protein_coding protein_coding MGP_129S1SvImJ_T0074048.1 MGP_129S1SvImJ_G0030038.1 mouse_genomes_project 5 125388283 125400706 - MGP_129S1SvImJ_P0074048 Sh2b3 protein_coding protein_coding MGP_129S1SvImJ_T0074049.1 MGP_129S1SvImJ_G0030038.1 mouse_genomes_project 5 125388981 125408020 - MGP_129S1SvImJ_P0074049 Sh2b3 protein_coding protein_coding MGP_129S1SvImJ_T0074050.1 MGP_129S1SvImJ_G0030038.1 mouse_genomes_project 5 125389187 125408789 - MGP_129S1SvImJ_P0074050 Sh2b3 protein_coding protein_coding MGP_129S1SvImJ_T0074051.1 MGP_129S1SvImJ_G0030038.1 mouse_genomes_project 5 125389261 125408756 - MGP_129S1SvImJ_P0074051 Sh2b3 protein_coding protein_coding MGP_129S1SvImJ_T0074052.1 MGP_129S1SvImJ_G0030038.1 mouse_genomes_project 5 125391078 125409585 - MGP_129S1SvImJ_P0074052 Sh2b3 protein_coding protein_coding MGP_129S1SvImJ_T0074053.1 MGP_129S1SvImJ_G0030038.1 mouse_genomes_project 5 125400532 125408180 - MGP_129S1SvImJ_P0074053 Sh2b3 protein_coding protein_coding MGP_129S1SvImJ_T0070218.1 MGP_129S1SvImJ_G0029297.1 mouse_genomes_project 5 11782997 12088255 + MGP_129S1SvImJ_P0070218 Pclo protein_coding protein_coding MGP_129S1SvImJ_T0070219.1 MGP_129S1SvImJ_G0029297.1 mouse_genomes_project 5 11782997 12169272 + MGP_129S1SvImJ_P0070219 Pclo protein_coding protein_coding MGP_129S1SvImJ_T0070220.1 MGP_129S1SvImJ_G0029297.1 mouse_genomes_project 5 11783072 12166005 + Pclo protein_coding retained_intron MGP_129S1SvImJ_T0070221.1 MGP_129S1SvImJ_G0029297.1 mouse_genomes_project 5 11963725 12088266 + MGP_129S1SvImJ_P0070221 Pclo protein_coding protein_coding MGP_129S1SvImJ_T0010726.1 MGP_129S1SvImJ_G0008842.1 mouse_genomes_project 5 117490785 117490849 + Mir7028 miRNA miRNA MGP_129S1SvImJ_T0001544.1 MGP_129S1SvImJ_G0001462.1 mouse_genomes_project 5 42156500 42160768 + TEC TEC MGP_129S1SvImJ_T0008361.1 MGP_129S1SvImJ_G0006798.1 mouse_genomes_project 5 126726701 126941688 - lincRNA lincRNA MGP_129S1SvImJ_T0099931.1 MGP_129S1SvImJ_G0037998.1 mouse_genomes_project 5 75708712 75708817 - Gm24502 snRNA snRNA MGP_129S1SvImJ_T0099940.1 MGP_129S1SvImJ_G0038007.1 mouse_genomes_project 5 87765571 87765659 - Gm25211 snRNA snRNA MGP_129S1SvImJ_T0014993.1 MGP_129S1SvImJ_G0013082.1 mouse_genomes_project 5 49831504 49832069 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070549.1 MGP_129S1SvImJ_G0029364.1 mouse_genomes_project 5 23589686 23607915 + Actr3b protein_coding processed_transcript MGP_129S1SvImJ_T0070550.1 MGP_129S1SvImJ_G0029364.1 mouse_genomes_project 5 23589732 23689940 + MGP_129S1SvImJ_P0070550 Actr3b protein_coding protein_coding MGP_129S1SvImJ_T0001528.1 MGP_129S1SvImJ_G0001446.1 mouse_genomes_project 5 32821131 32821600 + TEC TEC MGP_129S1SvImJ_T0071517.1 MGP_129S1SvImJ_G0029525.1 mouse_genomes_project 5 42455008 42463021 + MGP_129S1SvImJ_P0071517 Bst1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071518.1 MGP_129S1SvImJ_G0029525.1 mouse_genomes_project 5 42455014 42474627 + MGP_129S1SvImJ_P0071518 Bst1 protein_coding protein_coding MGP_129S1SvImJ_T0071519.1 MGP_129S1SvImJ_G0029525.1 mouse_genomes_project 5 42458252 42474107 + Bst1 protein_coding retained_intron MGP_129S1SvImJ_T0071520.1 MGP_129S1SvImJ_G0029525.1 mouse_genomes_project 5 42467754 42473051 + Bst1 protein_coding retained_intron MGP_129S1SvImJ_T0015147.1 MGP_129S1SvImJ_G0013236.1 mouse_genomes_project 5 113158790 113160482 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008447.1 MGP_129S1SvImJ_G0006853.1 mouse_genomes_project 5 151751010 151757200 - B230303O12Rik lincRNA lincRNA MGP_129S1SvImJ_T0072584.1 MGP_129S1SvImJ_G0029736.1 mouse_genomes_project 5 92217836 92226659 + MGP_129S1SvImJ_P0072584 Areg protein_coding protein_coding MGP_129S1SvImJ_T0102564.1 MGP_129S1SvImJ_G0040397.1 mouse_genomes_project 5 87917112 87918175 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0004866.1 MGP_129S1SvImJ_G0004190.1 mouse_genomes_project 5 135857693 135867019 + 2810432F15Rik antisense antisense MGP_129S1SvImJ_T0001698.1 MGP_129S1SvImJ_G0001614.1 mouse_genomes_project 5 69158020 69162381 - TEC TEC MGP_129S1SvImJ_T0073863.1 MGP_129S1SvImJ_G0029999.1 mouse_genomes_project 5 123141335 123149369 + MGP_129S1SvImJ_P0073863 Tbx5 protein_coding protein_coding MGP_129S1SvImJ_T0073864.1 MGP_129S1SvImJ_G0029999.1 mouse_genomes_project 5 123143304 123199264 + MGP_129S1SvImJ_P0073864 Tbx5 protein_coding protein_coding MGP_129S1SvImJ_T0073865.1 MGP_129S1SvImJ_G0029999.1 mouse_genomes_project 5 123144666 123154955 + MGP_129S1SvImJ_P0073865 Tbx5 protein_coding protein_coding MGP_129S1SvImJ_T0001909.1 MGP_129S1SvImJ_G0001822.1 mouse_genomes_project 5 143532987 143534458 + TEC TEC MGP_129S1SvImJ_T0072475.1 MGP_129S1SvImJ_G0029701.1 mouse_genomes_project 5 89140800 89141764 - MGP_129S1SvImJ_P0072475 Gm11116 protein_coding protein_coding MGP_129S1SvImJ_T0072553.1 MGP_129S1SvImJ_G0029724.1 mouse_genomes_project 5 91635860 91675505 + MGP_129S1SvImJ_P0072553 5830473C10Rik protein_coding protein_coding MGP_129S1SvImJ_T0072554.1 MGP_129S1SvImJ_G0029724.1 mouse_genomes_project 5 91635970 91653343 + MGP_129S1SvImJ_P0072554 5830473C10Rik protein_coding protein_coding MGP_129S1SvImJ_T0073330.1 MGP_129S1SvImJ_G0029895.1 mouse_genomes_project 5 113322226 113323581 + MGP_129S1SvImJ_P0073330 Chek2 protein_coding protein_coding MGP_129S1SvImJ_T0073331.1 MGP_129S1SvImJ_G0029895.1 mouse_genomes_project 5 113322230 113354301 + MGP_129S1SvImJ_P0073331 Chek2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073332.1 MGP_129S1SvImJ_G0029895.1 mouse_genomes_project 5 113322247 113354313 + MGP_129S1SvImJ_P0073332 Chek2 protein_coding protein_coding MGP_129S1SvImJ_T0073333.1 MGP_129S1SvImJ_G0029895.1 mouse_genomes_project 5 113322476 113323587 + MGP_129S1SvImJ_P0073333 Chek2 protein_coding protein_coding MGP_129S1SvImJ_T0073334.1 MGP_129S1SvImJ_G0029895.1 mouse_genomes_project 5 113323701 113327724 + Chek2 protein_coding retained_intron MGP_129S1SvImJ_T0101205.1 MGP_129S1SvImJ_G0039272.1 mouse_genomes_project 5 94288393 94288529 + Gm22915 snoRNA snoRNA MGP_129S1SvImJ_T0074505.1 MGP_129S1SvImJ_G0030108.1 mouse_genomes_project 5 128823086 128995805 - MGP_129S1SvImJ_P0074505 Ncor2 protein_coding protein_coding MGP_129S1SvImJ_T0074506.1 MGP_129S1SvImJ_G0030108.1 mouse_genomes_project 5 128823086 128851173 - MGP_129S1SvImJ_P0074506 Ncor2 protein_coding protein_coding MGP_129S1SvImJ_T0074507.1 MGP_129S1SvImJ_G0030108.1 mouse_genomes_project 5 128823086 128995805 - MGP_129S1SvImJ_P0074507 Ncor2 protein_coding protein_coding MGP_129S1SvImJ_T0074508.1 MGP_129S1SvImJ_G0030108.1 mouse_genomes_project 5 128823088 128995805 - MGP_129S1SvImJ_P0074508 Ncor2 protein_coding protein_coding MGP_129S1SvImJ_T0074509.1 MGP_129S1SvImJ_G0030108.1 mouse_genomes_project 5 128823095 128995805 - MGP_129S1SvImJ_P0074509 Ncor2 protein_coding protein_coding MGP_129S1SvImJ_T0074510.1 MGP_129S1SvImJ_G0030108.1 mouse_genomes_project 5 128823768 128995805 - MGP_129S1SvImJ_P0074510 Ncor2 protein_coding protein_coding MGP_129S1SvImJ_T0074511.1 MGP_129S1SvImJ_G0030108.1 mouse_genomes_project 5 128823768 128934654 - MGP_129S1SvImJ_P0074511 Ncor2 protein_coding protein_coding MGP_129S1SvImJ_T0074512.1 MGP_129S1SvImJ_G0030108.1 mouse_genomes_project 5 128823825 128833873 - MGP_129S1SvImJ_P0074512 Ncor2 protein_coding protein_coding MGP_129S1SvImJ_T0074513.1 MGP_129S1SvImJ_G0030108.1 mouse_genomes_project 5 128824067 128833412 - MGP_129S1SvImJ_P0074513 Ncor2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074514.1 MGP_129S1SvImJ_G0030108.1 mouse_genomes_project 5 128824165 128831572 - Ncor2 protein_coding retained_intron MGP_129S1SvImJ_T0074515.1 MGP_129S1SvImJ_G0030108.1 mouse_genomes_project 5 128833446 128835275 - MGP_129S1SvImJ_P0074515 Ncor2 protein_coding protein_coding MGP_129S1SvImJ_T0074516.1 MGP_129S1SvImJ_G0030108.1 mouse_genomes_project 5 128833452 128834438 - Ncor2 protein_coding retained_intron MGP_129S1SvImJ_T0074517.1 MGP_129S1SvImJ_G0030108.1 mouse_genomes_project 5 128839158 128866739 - MGP_129S1SvImJ_P0074517 Ncor2 protein_coding protein_coding MGP_129S1SvImJ_T0074518.1 MGP_129S1SvImJ_G0030108.1 mouse_genomes_project 5 128856157 128864328 - Ncor2 protein_coding retained_intron MGP_129S1SvImJ_T0074519.1 MGP_129S1SvImJ_G0030108.1 mouse_genomes_project 5 128859283 128866750 - MGP_129S1SvImJ_P0074519 Ncor2 protein_coding protein_coding MGP_129S1SvImJ_T0004873.1 MGP_129S1SvImJ_G0004196.1 mouse_genomes_project 5 139182484 139276583 + Gm43278 antisense antisense MGP_129S1SvImJ_T0015066.1 MGP_129S1SvImJ_G0013155.1 mouse_genomes_project 5 83700944 83701311 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099935.1 MGP_129S1SvImJ_G0038002.1 mouse_genomes_project 5 83469308 83469405 + Gm24129 snRNA snRNA MGP_129S1SvImJ_T0070316.1 MGP_129S1SvImJ_G0029320.1 mouse_genomes_project 5 19215774 19229945 + MGP_129S1SvImJ_P0070316 Armc10 protein_coding protein_coding MGP_129S1SvImJ_T0070317.1 MGP_129S1SvImJ_G0029320.1 mouse_genomes_project 5 19215978 19218631 + Armc10 protein_coding processed_transcript MGP_129S1SvImJ_T0070318.1 MGP_129S1SvImJ_G0029320.1 mouse_genomes_project 5 19216064 19229947 + MGP_129S1SvImJ_P0070318 Armc10 protein_coding protein_coding MGP_129S1SvImJ_T0070319.1 MGP_129S1SvImJ_G0029320.1 mouse_genomes_project 5 19218480 19221972 + Armc10 protein_coding retained_intron MGP_129S1SvImJ_T0071526.1 MGP_129S1SvImJ_G0029528.1 mouse_genomes_project 5 42632794 42748025 - MGP_129S1SvImJ_P0071526 Prom1 protein_coding protein_coding MGP_129S1SvImJ_T0071527.1 MGP_129S1SvImJ_G0029528.1 mouse_genomes_project 5 42632796 42745296 - MGP_129S1SvImJ_P0071527 Prom1 protein_coding protein_coding MGP_129S1SvImJ_T0071528.1 MGP_129S1SvImJ_G0029528.1 mouse_genomes_project 5 42632796 42748103 - MGP_129S1SvImJ_P0071528 Prom1 protein_coding protein_coding MGP_129S1SvImJ_T0071529.1 MGP_129S1SvImJ_G0029528.1 mouse_genomes_project 5 42632796 42645552 - MGP_129S1SvImJ_P0071529 Prom1 protein_coding protein_coding MGP_129S1SvImJ_T0071530.1 MGP_129S1SvImJ_G0029528.1 mouse_genomes_project 5 42632796 42747752 - MGP_129S1SvImJ_P0071530 Prom1 protein_coding protein_coding MGP_129S1SvImJ_T0071531.1 MGP_129S1SvImJ_G0029528.1 mouse_genomes_project 5 42632799 42740839 - MGP_129S1SvImJ_P0071531 Prom1 protein_coding protein_coding MGP_129S1SvImJ_T0071532.1 MGP_129S1SvImJ_G0029528.1 mouse_genomes_project 5 42632799 42740839 - MGP_129S1SvImJ_P0071532 Prom1 protein_coding protein_coding MGP_129S1SvImJ_T0071533.1 MGP_129S1SvImJ_G0029528.1 mouse_genomes_project 5 42641706 42745263 - MGP_129S1SvImJ_P0071533 Prom1 protein_coding protein_coding MGP_129S1SvImJ_T0071534.1 MGP_129S1SvImJ_G0029528.1 mouse_genomes_project 5 42641869 42740784 - MGP_129S1SvImJ_P0071534 Prom1 protein_coding protein_coding MGP_129S1SvImJ_T0071535.1 MGP_129S1SvImJ_G0029528.1 mouse_genomes_project 5 42641869 42740784 - MGP_129S1SvImJ_P0071535 Prom1 protein_coding protein_coding MGP_129S1SvImJ_T0071536.1 MGP_129S1SvImJ_G0029528.1 mouse_genomes_project 5 42641869 42740839 - MGP_129S1SvImJ_P0071536 Prom1 protein_coding protein_coding MGP_129S1SvImJ_T0071537.1 MGP_129S1SvImJ_G0029528.1 mouse_genomes_project 5 42653131 42677186 - Prom1 protein_coding retained_intron MGP_129S1SvImJ_T0071538.1 MGP_129S1SvImJ_G0029528.1 mouse_genomes_project 5 42670960 42689627 - MGP_129S1SvImJ_P0071538 Prom1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071539.1 MGP_129S1SvImJ_G0029528.1 mouse_genomes_project 5 42673845 42688701 - Prom1 protein_coding retained_intron MGP_129S1SvImJ_T0071540.1 MGP_129S1SvImJ_G0029528.1 mouse_genomes_project 5 42688077 42748029 - Prom1 protein_coding retained_intron MGP_129S1SvImJ_T0071541.1 MGP_129S1SvImJ_G0029528.1 mouse_genomes_project 5 42691646 42711664 - Prom1 protein_coding processed_transcript MGP_129S1SvImJ_T0071542.1 MGP_129S1SvImJ_G0029528.1 mouse_genomes_project 5 42700124 42745257 - MGP_129S1SvImJ_P0071542 Prom1 protein_coding protein_coding MGP_129S1SvImJ_T0071543.1 MGP_129S1SvImJ_G0029528.1 mouse_genomes_project 5 42745725 42748029 - Prom1 protein_coding processed_transcript MGP_129S1SvImJ_T0001755.1 MGP_129S1SvImJ_G0001670.1 mouse_genomes_project 5 103541841 103543186 + TEC TEC MGP_129S1SvImJ_T0072974.1 MGP_129S1SvImJ_G0029825.1 mouse_genomes_project 5 107305946 107378884 + MGP_129S1SvImJ_P0072974 Lrrc8b protein_coding protein_coding MGP_129S1SvImJ_T0014966.1 MGP_129S1SvImJ_G0013055.1 mouse_genomes_project 5 32720935 32721544 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099958.1 MGP_129S1SvImJ_G0038025.1 mouse_genomes_project 5 116624007 116624088 - Gm22056 snRNA snRNA MGP_129S1SvImJ_T0070944.1 MGP_129S1SvImJ_G0029431.1 mouse_genomes_project 5 29655455 29674562 - Rbks protein_coding processed_transcript MGP_129S1SvImJ_T0070945.1 MGP_129S1SvImJ_G0029431.1 mouse_genomes_project 5 29655455 29733169 - MGP_129S1SvImJ_P0070945 Rbks protein_coding protein_coding MGP_129S1SvImJ_T0070948.1 MGP_129S1SvImJ_G0029431.1 mouse_genomes_project 5 29694173 29720206 - Rbks protein_coding processed_transcript MGP_129S1SvImJ_T0075056.1 MGP_129S1SvImJ_G0030206.1 mouse_genomes_project 5 140892619 141009511 - MGP_129S1SvImJ_P0075056 Cux1 protein_coding protein_coding MGP_129S1SvImJ_T0075057.1 MGP_129S1SvImJ_G0030206.1 mouse_genomes_project 5 140892619 141228203 - MGP_129S1SvImJ_P0075057 Cux1 protein_coding protein_coding MGP_129S1SvImJ_T0075058.1 MGP_129S1SvImJ_G0030206.1 mouse_genomes_project 5 140892619 141228187 - MGP_129S1SvImJ_P0075058 Cux1 protein_coding protein_coding MGP_129S1SvImJ_T0075059.1 MGP_129S1SvImJ_G0030206.1 mouse_genomes_project 5 140892994 141228217 - MGP_129S1SvImJ_P0075059 Cux1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075060.1 MGP_129S1SvImJ_G0030206.1 mouse_genomes_project 5 140895011 141228202 - MGP_129S1SvImJ_P0075060 Cux1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075061.1 MGP_129S1SvImJ_G0030206.1 mouse_genomes_project 5 140914557 141228443 - MGP_129S1SvImJ_P0075061 Cux1 protein_coding protein_coding MGP_129S1SvImJ_T0075062.1 MGP_129S1SvImJ_G0030206.1 mouse_genomes_project 5 140916509 141228185 - MGP_129S1SvImJ_P0075062 Cux1 protein_coding protein_coding MGP_129S1SvImJ_T0075063.1 MGP_129S1SvImJ_G0030206.1 mouse_genomes_project 5 140922597 141227290 - MGP_129S1SvImJ_P0075063 Cux1 protein_coding protein_coding MGP_129S1SvImJ_T0075064.1 MGP_129S1SvImJ_G0030206.1 mouse_genomes_project 5 140922628 141226371 - MGP_129S1SvImJ_P0075064 Cux1 protein_coding protein_coding MGP_129S1SvImJ_T0075065.1 MGP_129S1SvImJ_G0030206.1 mouse_genomes_project 5 140922635 140950663 - Cux1 protein_coding processed_transcript MGP_129S1SvImJ_T0075066.1 MGP_129S1SvImJ_G0030206.1 mouse_genomes_project 5 140922933 141228158 - MGP_129S1SvImJ_P0075066 Cux1 protein_coding protein_coding MGP_129S1SvImJ_T0075067.1 MGP_129S1SvImJ_G0030206.1 mouse_genomes_project 5 140961863 141012790 - MGP_129S1SvImJ_P0075067 Cux1 protein_coding protein_coding MGP_129S1SvImJ_T0075068.1 MGP_129S1SvImJ_G0030206.1 mouse_genomes_project 5 141011808 141228191 - Cux1 protein_coding retained_intron MGP_129S1SvImJ_T0075069.1 MGP_129S1SvImJ_G0030206.1 mouse_genomes_project 5 141134295 141228488 - Cux1 protein_coding retained_intron MGP_129S1SvImJ_T0001865.1 MGP_129S1SvImJ_G0001779.1 mouse_genomes_project 5 134346291 134348994 + TEC TEC MGP_129S1SvImJ_T0015246.1 MGP_129S1SvImJ_G0013335.1 mouse_genomes_project 5 156985439 156987295 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001923.1 MGP_129S1SvImJ_G0001836.1 mouse_genomes_project 5 150726803 150731641 + TEC TEC MGP_129S1SvImJ_T0015013.1 MGP_129S1SvImJ_G0013102.1 mouse_genomes_project 5 59453768 59453962 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070560.1 MGP_129S1SvImJ_G0029366.1 mouse_genomes_project 5 25613870 25667975 - MGP_129S1SvImJ_P0070560 Paxip1 protein_coding protein_coding MGP_129S1SvImJ_T0070561.1 MGP_129S1SvImJ_G0029366.1 mouse_genomes_project 5 25619025 25626162 - Paxip1 protein_coding retained_intron MGP_129S1SvImJ_T0070562.1 MGP_129S1SvImJ_G0029366.1 mouse_genomes_project 5 25636157 25642163 - Paxip1 protein_coding retained_intron MGP_129S1SvImJ_T0070563.1 MGP_129S1SvImJ_G0029366.1 mouse_genomes_project 5 25648904 25667820 - MGP_129S1SvImJ_P0070563 Paxip1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070564.1 MGP_129S1SvImJ_G0029366.1 mouse_genomes_project 5 25657874 25668116 - Paxip1 protein_coding processed_transcript MGP_129S1SvImJ_T0070565.1 MGP_129S1SvImJ_G0029366.1 mouse_genomes_project 5 25660004 25667808 - Paxip1 protein_coding retained_intron MGP_129S1SvImJ_T0070566.1 MGP_129S1SvImJ_G0029366.1 mouse_genomes_project 5 25662970 25666798 - Paxip1 protein_coding retained_intron MGP_129S1SvImJ_T0099963.1 MGP_129S1SvImJ_G0038030.1 mouse_genomes_project 5 124832047 124832205 + Gm24671 snRNA snRNA MGP_129S1SvImJ_T0074297.1 MGP_129S1SvImJ_G0030076.1 mouse_genomes_project 5 127317643 127432064 - MGP_129S1SvImJ_P0074297 Clip1 protein_coding protein_coding MGP_129S1SvImJ_T0074298.1 MGP_129S1SvImJ_G0030076.1 mouse_genomes_project 5 127317643 127432360 - MGP_129S1SvImJ_P0074298 Clip1 protein_coding protein_coding MGP_129S1SvImJ_T0074299.1 MGP_129S1SvImJ_G0030076.1 mouse_genomes_project 5 127317655 127390408 - MGP_129S1SvImJ_P0074299 Clip1 protein_coding protein_coding MGP_129S1SvImJ_T0074300.1 MGP_129S1SvImJ_G0030076.1 mouse_genomes_project 5 127317655 127432014 - MGP_129S1SvImJ_P0074300 Clip1 protein_coding protein_coding MGP_129S1SvImJ_T0074301.1 MGP_129S1SvImJ_G0030076.1 mouse_genomes_project 5 127317666 127343472 - Clip1 protein_coding retained_intron MGP_129S1SvImJ_T0074302.1 MGP_129S1SvImJ_G0030076.1 mouse_genomes_project 5 127317715 127318402 - Clip1 protein_coding processed_transcript MGP_129S1SvImJ_T0074303.1 MGP_129S1SvImJ_G0030076.1 mouse_genomes_project 5 127318677 127432067 - MGP_129S1SvImJ_P0074303 Clip1 protein_coding protein_coding MGP_129S1SvImJ_T0074304.1 MGP_129S1SvImJ_G0030076.1 mouse_genomes_project 5 127318918 127351828 - Clip1 protein_coding retained_intron MGP_129S1SvImJ_T0074305.1 MGP_129S1SvImJ_G0030076.1 mouse_genomes_project 5 127319088 127400107 - MGP_129S1SvImJ_P0074305 Clip1 protein_coding protein_coding MGP_129S1SvImJ_T0074306.1 MGP_129S1SvImJ_G0030076.1 mouse_genomes_project 5 127319295 127357478 - MGP_129S1SvImJ_P0074306 Clip1 protein_coding protein_coding MGP_129S1SvImJ_T0074307.1 MGP_129S1SvImJ_G0030076.1 mouse_genomes_project 5 127326025 127357119 - Clip1 protein_coding retained_intron MGP_129S1SvImJ_T0074308.1 MGP_129S1SvImJ_G0030076.1 mouse_genomes_project 5 127329919 127343381 - Clip1 protein_coding retained_intron MGP_129S1SvImJ_T0074309.1 MGP_129S1SvImJ_G0030076.1 mouse_genomes_project 5 127357312 127399997 - MGP_129S1SvImJ_P0074309 Clip1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074310.1 MGP_129S1SvImJ_G0030076.1 mouse_genomes_project 5 127357361 127411261 - MGP_129S1SvImJ_P0074310 Clip1 protein_coding protein_coding MGP_129S1SvImJ_T0074311.1 MGP_129S1SvImJ_G0030076.1 mouse_genomes_project 5 127374953 127377643 - Clip1 protein_coding retained_intron MGP_129S1SvImJ_T0074237.1 MGP_129S1SvImJ_G0030064.1 mouse_genomes_project 5 126786729 126819055 - MGP_129S1SvImJ_P0074237 Rhof protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074238.1 MGP_129S1SvImJ_G0030064.1 mouse_genomes_project 5 126786729 126818990 - MGP_129S1SvImJ_P0074238 Rhof protein_coding protein_coding MGP_129S1SvImJ_T0074239.1 MGP_129S1SvImJ_G0030064.1 mouse_genomes_project 5 126794854 126819023 - Rhof protein_coding processed_transcript MGP_129S1SvImJ_T0074240.1 MGP_129S1SvImJ_G0030064.1 mouse_genomes_project 5 126803443 126819286 - MGP_129S1SvImJ_P0074240 Rhof protein_coding protein_coding MGP_129S1SvImJ_T0072409.1 MGP_129S1SvImJ_G0029685.1 mouse_genomes_project 5 88383639 88411815 - MGP_129S1SvImJ_P0072409 protein_coding protein_coding MGP_129S1SvImJ_T0070306.1 MGP_129S1SvImJ_G0029316.1 mouse_genomes_project 5 18915251 18920995 + MGP_129S1SvImJ_P0070306 Fgl2 protein_coding protein_coding MGP_129S1SvImJ_T0073055.1 MGP_129S1SvImJ_G0029841.1 mouse_genomes_project 5 109580612 109594294 + MGP_129S1SvImJ_P0073055 1700028K03Rik protein_coding protein_coding MGP_129S1SvImJ_T0073056.1 MGP_129S1SvImJ_G0029841.1 mouse_genomes_project 5 109580623 109597200 + 1700028K03Rik protein_coding processed_transcript MGP_129S1SvImJ_T0073057.1 MGP_129S1SvImJ_G0029841.1 mouse_genomes_project 5 109580640 109595127 + MGP_129S1SvImJ_P0073057 1700028K03Rik protein_coding protein_coding MGP_129S1SvImJ_T0073058.1 MGP_129S1SvImJ_G0029841.1 mouse_genomes_project 5 109580660 109594935 + 1700028K03Rik protein_coding retained_intron MGP_129S1SvImJ_T0069998.1 MGP_129S1SvImJ_G0029263.1 mouse_genomes_project 5 624249 661769 + Krit1 protein_coding retained_intron MGP_129S1SvImJ_T0069999.1 MGP_129S1SvImJ_G0029263.1 mouse_genomes_project 5 624249 661844 + MGP_129S1SvImJ_P0069999 Krit1 protein_coding protein_coding MGP_129S1SvImJ_T0070000.1 MGP_129S1SvImJ_G0029263.1 mouse_genomes_project 5 624250 632780 + Krit1 protein_coding retained_intron MGP_129S1SvImJ_T0070001.1 MGP_129S1SvImJ_G0029263.1 mouse_genomes_project 5 624254 661844 + MGP_129S1SvImJ_P0070001 Krit1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070002.1 MGP_129S1SvImJ_G0029263.1 mouse_genomes_project 5 624255 666049 + MGP_129S1SvImJ_P0070002 Krit1 protein_coding protein_coding MGP_129S1SvImJ_T0070003.1 MGP_129S1SvImJ_G0029263.1 mouse_genomes_project 5 624470 664788 + MGP_129S1SvImJ_P0070003 Krit1 protein_coding protein_coding MGP_129S1SvImJ_T0070004.1 MGP_129S1SvImJ_G0029263.1 mouse_genomes_project 5 625305 630773 + MGP_129S1SvImJ_P0070004 Krit1 protein_coding protein_coding MGP_129S1SvImJ_T0070005.1 MGP_129S1SvImJ_G0029263.1 mouse_genomes_project 5 626358 632573 + Krit1 protein_coding retained_intron MGP_129S1SvImJ_T0070006.1 MGP_129S1SvImJ_G0029263.1 mouse_genomes_project 5 633838 639630 + Krit1 protein_coding retained_intron MGP_129S1SvImJ_T0070007.1 MGP_129S1SvImJ_G0029263.1 mouse_genomes_project 5 636751 641014 + Krit1 protein_coding retained_intron MGP_129S1SvImJ_T0070008.1 MGP_129S1SvImJ_G0029263.1 mouse_genomes_project 5 644219 646133 + Krit1 protein_coding retained_intron MGP_129S1SvImJ_T0015015.1 MGP_129S1SvImJ_G0013104.1 mouse_genomes_project 5 60039728 60040149 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073776.1 MGP_129S1SvImJ_G0029981.1 mouse_genomes_project 5 119401174 119420217 - MGP_129S1SvImJ_P0073776 Hspb8 protein_coding protein_coding MGP_129S1SvImJ_T0073777.1 MGP_129S1SvImJ_G0029981.1 mouse_genomes_project 5 119401623 119410388 - Hspb8 protein_coding processed_transcript MGP_129S1SvImJ_T0001662.1 MGP_129S1SvImJ_G0001578.1 mouse_genomes_project 5 65551759 65553368 + TEC TEC MGP_129S1SvImJ_T0001574.1 MGP_129S1SvImJ_G0001492.1 mouse_genomes_project 5 47008410 47010984 + TEC TEC MGP_129S1SvImJ_T0072809.1 MGP_129S1SvImJ_G0029785.1 mouse_genomes_project 5 101841026 101858285 - Sec31a protein_coding retained_intron MGP_129S1SvImJ_T0072810.1 MGP_129S1SvImJ_G0029785.1 mouse_genomes_project 5 101841026 101897032 - MGP_129S1SvImJ_P0072810 Sec31a protein_coding protein_coding MGP_129S1SvImJ_T0072811.1 MGP_129S1SvImJ_G0029785.1 mouse_genomes_project 5 101841027 101852856 - MGP_129S1SvImJ_P0072811 Sec31a protein_coding protein_coding MGP_129S1SvImJ_T0072812.1 MGP_129S1SvImJ_G0029785.1 mouse_genomes_project 5 101841031 101896973 - MGP_129S1SvImJ_P0072812 Sec31a protein_coding protein_coding MGP_129S1SvImJ_T0072813.1 MGP_129S1SvImJ_G0029785.1 mouse_genomes_project 5 101841385 101876730 - MGP_129S1SvImJ_P0072813 Sec31a protein_coding protein_coding MGP_129S1SvImJ_T0072814.1 MGP_129S1SvImJ_G0029785.1 mouse_genomes_project 5 101841523 101843648 - Sec31a protein_coding retained_intron MGP_129S1SvImJ_T0072815.1 MGP_129S1SvImJ_G0029785.1 mouse_genomes_project 5 101841588 101862219 - MGP_129S1SvImJ_P0072815 Sec31a protein_coding protein_coding MGP_129S1SvImJ_T0072816.1 MGP_129S1SvImJ_G0029785.1 mouse_genomes_project 5 101845131 101858371 - MGP_129S1SvImJ_P0072816 Sec31a protein_coding protein_coding MGP_129S1SvImJ_T0072817.1 MGP_129S1SvImJ_G0029785.1 mouse_genomes_project 5 101862250 101871986 - MGP_129S1SvImJ_P0072817 Sec31a protein_coding protein_coding MGP_129S1SvImJ_T0072818.1 MGP_129S1SvImJ_G0029785.1 mouse_genomes_project 5 101882261 101886390 - Sec31a protein_coding processed_transcript MGP_129S1SvImJ_T0072819.1 MGP_129S1SvImJ_G0029785.1 mouse_genomes_project 5 101888495 101890426 - Sec31a protein_coding retained_intron MGP_129S1SvImJ_T0072820.1 MGP_129S1SvImJ_G0029785.1 mouse_genomes_project 5 101896208 101896964 - Sec31a protein_coding retained_intron MGP_129S1SvImJ_T0074983.1 MGP_129S1SvImJ_G0030193.1 mouse_genomes_project 5 140508209 140538319 - MGP_129S1SvImJ_P0074983 Ywhag protein_coding protein_coding MGP_129S1SvImJ_T0074984.1 MGP_129S1SvImJ_G0030193.1 mouse_genomes_project 5 140508209 140538274 - MGP_129S1SvImJ_P0074984 Ywhag protein_coding protein_coding MGP_129S1SvImJ_T0074985.1 MGP_129S1SvImJ_G0030193.1 mouse_genomes_project 5 140532545 140538317 - Ywhag protein_coding retained_intron MGP_129S1SvImJ_T0074986.1 MGP_129S1SvImJ_G0030193.1 mouse_genomes_project 5 140532550 140538336 - Ywhag protein_coding processed_transcript MGP_129S1SvImJ_T0074987.1 MGP_129S1SvImJ_G0030193.1 mouse_genomes_project 5 140532626 140538270 - Ywhag protein_coding processed_transcript MGP_129S1SvImJ_T0014862.1 MGP_129S1SvImJ_G0012951.1 mouse_genomes_project 5 1636377 1637209 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004724.1 MGP_129S1SvImJ_G0004091.1 mouse_genomes_project 5 66753480 66755862 - Gm15948 antisense antisense MGP_129S1SvImJ_T0073936.1 MGP_129S1SvImJ_G0030018.1 mouse_genomes_project 5 124283667 124294259 + MGP_129S1SvImJ_P0073936 Oas1h protein_coding protein_coding MGP_129S1SvImJ_T0073937.1 MGP_129S1SvImJ_G0030018.1 mouse_genomes_project 5 124283684 124293894 + MGP_129S1SvImJ_P0073937 Oas1h protein_coding protein_coding MGP_129S1SvImJ_T0010736.1 MGP_129S1SvImJ_G0008852.1 mouse_genomes_project 5 138715467 138715536 + Mir3965 miRNA miRNA MGP_129S1SvImJ_T0015163.1 MGP_129S1SvImJ_G0013252.1 mouse_genomes_project 5 120109956 120110447 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072945.1 MGP_129S1SvImJ_G0029811.1 mouse_genomes_project 5 105882226 105893680 + MGP_129S1SvImJ_P0072945 Dmp1 protein_coding protein_coding MGP_129S1SvImJ_T0010728.1 MGP_129S1SvImJ_G0008844.1 mouse_genomes_project 5 118553635 118553695 + Mir7030 miRNA miRNA MGP_129S1SvImJ_T0001700.1 MGP_129S1SvImJ_G0001616.1 mouse_genomes_project 5 72476310 72477300 - TEC TEC MGP_129S1SvImJ_T0075677.1 MGP_129S1SvImJ_G0030330.1 mouse_genomes_project 5 148685259 148721423 + MGP_129S1SvImJ_P0075677 Grid2ip protein_coding protein_coding MGP_129S1SvImJ_T0075678.1 MGP_129S1SvImJ_G0030330.1 mouse_genomes_project 5 148691759 148721753 + MGP_129S1SvImJ_P0075678 Grid2ip protein_coding protein_coding MGP_129S1SvImJ_T0075679.1 MGP_129S1SvImJ_G0030330.1 mouse_genomes_project 5 148697886 148722107 + MGP_129S1SvImJ_P0075679 Grid2ip protein_coding protein_coding MGP_129S1SvImJ_T0075680.1 MGP_129S1SvImJ_G0030330.1 mouse_genomes_project 5 148700763 148703525 + Grid2ip protein_coding retained_intron MGP_129S1SvImJ_T0075681.1 MGP_129S1SvImJ_G0030330.1 mouse_genomes_project 5 148703252 148708274 + Grid2ip protein_coding retained_intron MGP_129S1SvImJ_T0071750.1 MGP_129S1SvImJ_G0029564.1 mouse_genomes_project 5 63475726 63537961 - MGP_129S1SvImJ_P0071750 Rell1 protein_coding protein_coding MGP_129S1SvImJ_T0071751.1 MGP_129S1SvImJ_G0029564.1 mouse_genomes_project 5 63475894 63537887 - MGP_129S1SvImJ_P0071751 Rell1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071752.1 MGP_129S1SvImJ_G0029564.1 mouse_genomes_project 5 63492383 63498332 - Rell1 protein_coding processed_transcript MGP_129S1SvImJ_T0071753.1 MGP_129S1SvImJ_G0029564.1 mouse_genomes_project 5 63494638 63498195 - Rell1 protein_coding retained_intron MGP_129S1SvImJ_T0071754.1 MGP_129S1SvImJ_G0029564.1 mouse_genomes_project 5 63527993 63537903 - Rell1 protein_coding processed_transcript MGP_129S1SvImJ_T0099947.1 MGP_129S1SvImJ_G0038014.1 mouse_genomes_project 5 101355420 101355519 - Gm22838 snRNA snRNA MGP_129S1SvImJ_T0014869.1 MGP_129S1SvImJ_G0012958.1 mouse_genomes_project 5 4248705 4249291 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008132.1 MGP_129S1SvImJ_G0006630.1 mouse_genomes_project 5 43069919 43084816 - Gm42985 lincRNA lincRNA MGP_129S1SvImJ_T0015242.1 MGP_129S1SvImJ_G0013331.1 mouse_genomes_project 5 155904368 155905878 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001792.1 MGP_129S1SvImJ_G0001707.1 mouse_genomes_project 5 116592354 116596851 - TEC TEC MGP_129S1SvImJ_T0001811.1 MGP_129S1SvImJ_G0001726.1 mouse_genomes_project 5 121815536 121816556 + TEC TEC MGP_129S1SvImJ_T0099946.1 MGP_129S1SvImJ_G0038013.1 mouse_genomes_project 5 98163753 98163948 + Gm24623 snRNA snRNA MGP_129S1SvImJ_T0008159.1 MGP_129S1SvImJ_G0006655.1 mouse_genomes_project 5 64067557 64074517 + C030018K13Rik lincRNA lincRNA MGP_129S1SvImJ_T0008160.1 MGP_129S1SvImJ_G0006655.1 mouse_genomes_project 5 64067563 64070296 + C030018K13Rik lincRNA lincRNA MGP_129S1SvImJ_T0008161.1 MGP_129S1SvImJ_G0006655.1 mouse_genomes_project 5 64067584 64073015 + C030018K13Rik lincRNA lincRNA MGP_129S1SvImJ_T0001706.1 MGP_129S1SvImJ_G0001621.1 mouse_genomes_project 5 73174749 73177211 - TEC TEC MGP_129S1SvImJ_T0001501.1 MGP_129S1SvImJ_G0001421.1 mouse_genomes_project 5 25082680 25085277 + TEC TEC MGP_129S1SvImJ_T0071712.1 MGP_129S1SvImJ_G0029555.1 mouse_genomes_project 5 52775508 52783110 - MGP_129S1SvImJ_P0071712 Cckar protein_coding protein_coding MGP_129S1SvImJ_T0071713.1 MGP_129S1SvImJ_G0029555.1 mouse_genomes_project 5 52782097 52783313 - Cckar protein_coding processed_transcript MGP_129S1SvImJ_T0004653.1 MGP_129S1SvImJ_G0004034.1 mouse_genomes_project 5 11788746 11816089 - Gm26918 antisense antisense MGP_129S1SvImJ_T0101174.1 MGP_129S1SvImJ_G0039241.1 mouse_genomes_project 5 5202889 5203033 + Gm23993 snoRNA snoRNA MGP_129S1SvImJ_T0072170.1 MGP_129S1SvImJ_G0029634.1 mouse_genomes_project 5 74684029 74775060 - MGP_129S1SvImJ_P0072170 Lnx1 protein_coding protein_coding MGP_129S1SvImJ_T0072171.1 MGP_129S1SvImJ_G0029634.1 mouse_genomes_project 5 74684029 74784369 - MGP_129S1SvImJ_P0072171 Lnx1 protein_coding protein_coding MGP_129S1SvImJ_T0072172.1 MGP_129S1SvImJ_G0029634.1 mouse_genomes_project 5 74684029 74775061 - MGP_129S1SvImJ_P0072172 Lnx1 protein_coding protein_coding MGP_129S1SvImJ_T0072173.1 MGP_129S1SvImJ_G0029634.1 mouse_genomes_project 5 74684261 74775046 - MGP_129S1SvImJ_P0072173 Lnx1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072175.1 MGP_129S1SvImJ_G0029634.1 mouse_genomes_project 5 74688682 74774817 - MGP_129S1SvImJ_P0072175 Lnx1 protein_coding protein_coding MGP_129S1SvImJ_T0072176.1 MGP_129S1SvImJ_G0029634.1 mouse_genomes_project 5 74688682 74803541 - MGP_129S1SvImJ_P0072176 Lnx1 protein_coding protein_coding MGP_129S1SvImJ_T0072177.1 MGP_129S1SvImJ_G0029634.1 mouse_genomes_project 5 74688682 74774988 - MGP_129S1SvImJ_P0072177 Lnx1 protein_coding protein_coding MGP_129S1SvImJ_T0072178.1 MGP_129S1SvImJ_G0029634.1 mouse_genomes_project 5 74688682 74775061 - MGP_129S1SvImJ_P0072178 Lnx1 protein_coding protein_coding MGP_129S1SvImJ_T0072179.1 MGP_129S1SvImJ_G0029634.1 mouse_genomes_project 5 74689354 74716055 - MGP_129S1SvImJ_P0072179 Lnx1 protein_coding protein_coding MGP_129S1SvImJ_T0072480.1 MGP_129S1SvImJ_G0029706.1 mouse_genomes_project 5 89451273 89464780 + MGP_129S1SvImJ_P0072480 Ambn protein_coding protein_coding MGP_129S1SvImJ_T0072481.1 MGP_129S1SvImJ_G0029706.1 mouse_genomes_project 5 89451293 89465129 + MGP_129S1SvImJ_P0072481 Ambn protein_coding protein_coding MGP_129S1SvImJ_T0015034.1 MGP_129S1SvImJ_G0013123.1 mouse_genomes_project 5 66646369 66646880 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0071521.1 MGP_129S1SvImJ_G0029526.1 mouse_genomes_project 5 42501791 42546436 + MGP_129S1SvImJ_P0071521 Cd38 protein_coding protein_coding MGP_129S1SvImJ_T0071522.1 MGP_129S1SvImJ_G0029526.1 mouse_genomes_project 5 42502098 42502979 + Cd38 protein_coding retained_intron MGP_129S1SvImJ_T0071243.1 MGP_129S1SvImJ_G0029474.1 mouse_genomes_project 5 33302527 33309441 + MGP_129S1SvImJ_P0071243 Hgfac protein_coding protein_coding MGP_129S1SvImJ_T0071244.1 MGP_129S1SvImJ_G0029474.1 mouse_genomes_project 5 33302595 33309478 + Hgfac protein_coding retained_intron MGP_129S1SvImJ_T0071245.1 MGP_129S1SvImJ_G0029474.1 mouse_genomes_project 5 33302595 33304699 + MGP_129S1SvImJ_P0071245 Hgfac protein_coding protein_coding MGP_129S1SvImJ_T0071246.1 MGP_129S1SvImJ_G0029474.1 mouse_genomes_project 5 33304623 33306463 + Hgfac protein_coding retained_intron MGP_129S1SvImJ_T0071247.1 MGP_129S1SvImJ_G0029474.1 mouse_genomes_project 5 33305365 33307980 + MGP_129S1SvImJ_P0071247 Hgfac protein_coding protein_coding MGP_129S1SvImJ_T0071248.1 MGP_129S1SvImJ_G0029474.1 mouse_genomes_project 5 33305842 33306928 + Hgfac protein_coding retained_intron MGP_129S1SvImJ_T0071249.1 MGP_129S1SvImJ_G0029474.1 mouse_genomes_project 5 33307581 33309423 + Hgfac protein_coding retained_intron MGP_129S1SvImJ_T0001864.1 MGP_129S1SvImJ_G0001778.1 mouse_genomes_project 5 134245195 134245693 + TEC TEC MGP_129S1SvImJ_T0001558.1 MGP_129S1SvImJ_G0001476.1 mouse_genomes_project 5 43241611 43241750 + TEC TEC MGP_129S1SvImJ_T0008060.1 MGP_129S1SvImJ_G0006584.1 mouse_genomes_project 5 15914565 15933623 - lincRNA lincRNA MGP_129S1SvImJ_T0075176.1 MGP_129S1SvImJ_G0030228.1 mouse_genomes_project 5 142264823 142265811 - MGP_129S1SvImJ_P0075176 Pop7 protein_coding protein_coding MGP_129S1SvImJ_T0075177.1 MGP_129S1SvImJ_G0030228.1 mouse_genomes_project 5 142264824 142265904 - MGP_129S1SvImJ_P0075177 Pop7 protein_coding protein_coding MGP_129S1SvImJ_T0001765.1 MGP_129S1SvImJ_G0001680.1 mouse_genomes_project 5 107799906 107802168 + TEC TEC MGP_129S1SvImJ_T0070743.1 MGP_129S1SvImJ_G0029402.1 mouse_genomes_project 5 28891857 28904842 - MGP_129S1SvImJ_P0070743 Cgref1 protein_coding protein_coding MGP_129S1SvImJ_T0070744.1 MGP_129S1SvImJ_G0029402.1 mouse_genomes_project 5 28893932 28904657 - Cgref1 protein_coding retained_intron MGP_129S1SvImJ_T0075209.1 MGP_129S1SvImJ_G0030233.1 mouse_genomes_project 5 142369833 142373917 - MGP_129S1SvImJ_P0075209 Mospd3 protein_coding protein_coding MGP_129S1SvImJ_T0075210.1 MGP_129S1SvImJ_G0030233.1 mouse_genomes_project 5 142369833 142374253 - MGP_129S1SvImJ_P0075210 Mospd3 protein_coding protein_coding MGP_129S1SvImJ_T0075211.1 MGP_129S1SvImJ_G0030233.1 mouse_genomes_project 5 142370343 142374009 - Mospd3 protein_coding processed_transcript MGP_129S1SvImJ_T0075212.1 MGP_129S1SvImJ_G0030233.1 mouse_genomes_project 5 142370395 142374267 - MGP_129S1SvImJ_P0075212 Mospd3 protein_coding protein_coding MGP_129S1SvImJ_T0075213.1 MGP_129S1SvImJ_G0030233.1 mouse_genomes_project 5 142373242 142373933 - MGP_129S1SvImJ_P0075213 Mospd3 protein_coding protein_coding MGP_129S1SvImJ_T0075214.1 MGP_129S1SvImJ_G0030233.1 mouse_genomes_project 5 142373291 142373900 - Mospd3 protein_coding retained_intron MGP_129S1SvImJ_T0072918.1 MGP_129S1SvImJ_G0029803.1 mouse_genomes_project 5 105333560 105471199 + Aff1 protein_coding retained_intron MGP_129S1SvImJ_T0072919.1 MGP_129S1SvImJ_G0029803.1 mouse_genomes_project 5 105403468 105511467 + MGP_129S1SvImJ_P0072919 Aff1 protein_coding protein_coding MGP_129S1SvImJ_T0072920.1 MGP_129S1SvImJ_G0029803.1 mouse_genomes_project 5 105403868 105497279 + MGP_129S1SvImJ_P0072920 Aff1 protein_coding protein_coding MGP_129S1SvImJ_T0072921.1 MGP_129S1SvImJ_G0029803.1 mouse_genomes_project 5 105403877 105511467 + MGP_129S1SvImJ_P0072921 Aff1 protein_coding protein_coding MGP_129S1SvImJ_T0072922.1 MGP_129S1SvImJ_G0029803.1 mouse_genomes_project 5 105437221 105466355 + Aff1 protein_coding retained_intron MGP_129S1SvImJ_T0071506.1 MGP_129S1SvImJ_G0029524.1 mouse_genomes_project 5 42380144 42418838 - MGP_129S1SvImJ_P0071506 Fbxl5 protein_coding protein_coding MGP_129S1SvImJ_T0071507.1 MGP_129S1SvImJ_G0029524.1 mouse_genomes_project 5 42380145 42418804 - MGP_129S1SvImJ_P0071507 Fbxl5 protein_coding protein_coding MGP_129S1SvImJ_T0071508.1 MGP_129S1SvImJ_G0029524.1 mouse_genomes_project 5 42380153 42458389 - MGP_129S1SvImJ_P0071508 Fbxl5 protein_coding protein_coding MGP_129S1SvImJ_T0071509.1 MGP_129S1SvImJ_G0029524.1 mouse_genomes_project 5 42380828 42418743 - MGP_129S1SvImJ_P0071509 Fbxl5 protein_coding protein_coding MGP_129S1SvImJ_T0071510.1 MGP_129S1SvImJ_G0029524.1 mouse_genomes_project 5 42387261 42418797 - MGP_129S1SvImJ_P0071510 Fbxl5 protein_coding protein_coding MGP_129S1SvImJ_T0071511.1 MGP_129S1SvImJ_G0029524.1 mouse_genomes_project 5 42392560 42418816 - MGP_129S1SvImJ_P0071511 Fbxl5 protein_coding protein_coding MGP_129S1SvImJ_T0071512.1 MGP_129S1SvImJ_G0029524.1 mouse_genomes_project 5 42394540 42418832 - MGP_129S1SvImJ_P0071512 Fbxl5 protein_coding protein_coding MGP_129S1SvImJ_T0071513.1 MGP_129S1SvImJ_G0029524.1 mouse_genomes_project 5 42395345 42396540 - Fbxl5 protein_coding retained_intron MGP_129S1SvImJ_T0071514.1 MGP_129S1SvImJ_G0029524.1 mouse_genomes_project 5 42397687 42418797 - Fbxl5 protein_coding retained_intron MGP_129S1SvImJ_T0071515.1 MGP_129S1SvImJ_G0029524.1 mouse_genomes_project 5 42398967 42418813 - Fbxl5 protein_coding retained_intron MGP_129S1SvImJ_T0071516.1 MGP_129S1SvImJ_G0029524.1 mouse_genomes_project 5 42404765 42418795 - MGP_129S1SvImJ_P0071516 Fbxl5 protein_coding protein_coding MGP_129S1SvImJ_T0008289.1 MGP_129S1SvImJ_G0006750.1 mouse_genomes_project 5 113259857 113261800 + Gm26515 lincRNA lincRNA MGP_129S1SvImJ_T0075882.1 MGP_129S1SvImJ_G0030376.1 mouse_genomes_project 5 151964253 152056353 + MGP_129S1SvImJ_P0075882 Wasf3 protein_coding protein_coding MGP_129S1SvImJ_T0075883.1 MGP_129S1SvImJ_G0030376.1 mouse_genomes_project 5 151964462 152056357 + MGP_129S1SvImJ_P0075883 Wasf3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0008418.1 MGP_129S1SvImJ_G0006830.1 mouse_genomes_project 5 138452208 138453005 - Gm15627 lincRNA lincRNA MGP_129S1SvImJ_T0074520.1 MGP_129S1SvImJ_G0030109.1 mouse_genomes_project 5 129106126 129180129 - MGP_129S1SvImJ_P0074520 Scarb1 protein_coding protein_coding MGP_129S1SvImJ_T0074521.1 MGP_129S1SvImJ_G0030109.1 mouse_genomes_project 5 129106128 129180106 - MGP_129S1SvImJ_P0074521 Scarb1 protein_coding protein_coding MGP_129S1SvImJ_T0074522.1 MGP_129S1SvImJ_G0030109.1 mouse_genomes_project 5 129106605 129124584 - MGP_129S1SvImJ_P0074522 Scarb1 protein_coding protein_coding MGP_129S1SvImJ_T0074523.1 MGP_129S1SvImJ_G0030109.1 mouse_genomes_project 5 129106826 129114638 - Scarb1 protein_coding processed_transcript MGP_129S1SvImJ_T0074524.1 MGP_129S1SvImJ_G0030109.1 mouse_genomes_project 5 129113428 129117154 - Scarb1 protein_coding retained_intron MGP_129S1SvImJ_T0074525.1 MGP_129S1SvImJ_G0030109.1 mouse_genomes_project 5 129113833 129180054 - Scarb1 protein_coding retained_intron MGP_129S1SvImJ_T0074526.1 MGP_129S1SvImJ_G0030109.1 mouse_genomes_project 5 129129347 129138682 - Scarb1 protein_coding retained_intron MGP_129S1SvImJ_T0074527.1 MGP_129S1SvImJ_G0030109.1 mouse_genomes_project 5 129134481 129152472 - Scarb1 protein_coding processed_transcript MGP_129S1SvImJ_T0074528.1 MGP_129S1SvImJ_G0030109.1 mouse_genomes_project 5 129137328 129179034 - MGP_129S1SvImJ_P0074528 Scarb1 protein_coding protein_coding MGP_129S1SvImJ_T0074529.1 MGP_129S1SvImJ_G0030109.1 mouse_genomes_project 5 129138388 129162109 - Scarb1 protein_coding processed_transcript MGP_129S1SvImJ_T0074530.1 MGP_129S1SvImJ_G0030109.1 mouse_genomes_project 5 129161102 129164902 - Scarb1 protein_coding retained_intron MGP_129S1SvImJ_T0073133.1 MGP_129S1SvImJ_G0029854.1 mouse_genomes_project 5 110498885 110545087 + MGP_129S1SvImJ_P0073133 Pde6b protein_coding protein_coding MGP_129S1SvImJ_T0073134.1 MGP_129S1SvImJ_G0029854.1 mouse_genomes_project 5 110498920 110545011 + Pde6b protein_coding retained_intron MGP_129S1SvImJ_T0073135.1 MGP_129S1SvImJ_G0029854.1 mouse_genomes_project 5 110543720 110545741 + Pde6b protein_coding retained_intron MGP_129S1SvImJ_T0098966.1 MGP_129S1SvImJ_G0037044.1 mouse_genomes_project 5 133842905 133844245 + Gm15903 sense_intronic sense_intronic MGP_129S1SvImJ_T0098967.1 MGP_129S1SvImJ_G0037044.1 mouse_genomes_project 5 133844031 133847549 + Gm15903 sense_intronic sense_intronic MGP_129S1SvImJ_T0004742.1 MGP_129S1SvImJ_G0004106.1 mouse_genomes_project 5 77675668 77682752 + Gm43261 antisense antisense MGP_129S1SvImJ_T0001891.1 MGP_129S1SvImJ_G0001805.1 mouse_genomes_project 5 136761707 136763872 - TEC TEC MGP_129S1SvImJ_T0001743.1 MGP_129S1SvImJ_G0001658.1 mouse_genomes_project 5 98206775 98207295 + TEC TEC MGP_129S1SvImJ_T0101709.1 MGP_129S1SvImJ_G0039716.1 mouse_genomes_project 5 20091685 20093048 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101710.1 MGP_129S1SvImJ_G0039716.1 mouse_genomes_project 5 20091888 20093573 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0004749.1 MGP_129S1SvImJ_G0004112.1 mouse_genomes_project 5 91580904 91597787 - Gm43449 antisense antisense MGP_129S1SvImJ_T0070301.1 MGP_129S1SvImJ_G0029315.1 mouse_genomes_project 5 18837358 18971386 - MGP_129S1SvImJ_P0070301 Ccdc146 protein_coding protein_coding MGP_129S1SvImJ_T0070302.1 MGP_129S1SvImJ_G0029315.1 mouse_genomes_project 5 18864475 18971386 - MGP_129S1SvImJ_P0070302 Ccdc146 protein_coding protein_coding MGP_129S1SvImJ_T0070303.1 MGP_129S1SvImJ_G0029315.1 mouse_genomes_project 5 18864758 18878421 - Ccdc146 protein_coding retained_intron MGP_129S1SvImJ_T0070304.1 MGP_129S1SvImJ_G0029315.1 mouse_genomes_project 5 18865589 18869141 - Ccdc146 protein_coding retained_intron MGP_129S1SvImJ_T0070305.1 MGP_129S1SvImJ_G0029315.1 mouse_genomes_project 5 18869194 18878635 - Ccdc146 protein_coding processed_transcript MGP_129S1SvImJ_T0015031.1 MGP_129S1SvImJ_G0013120.1 mouse_genomes_project 5 63905122 63905621 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072704.1 MGP_129S1SvImJ_G0029759.1 mouse_genomes_project 5 94403340 94428823 - MGP_129S1SvImJ_P0072704 Ccni protein_coding protein_coding MGP_129S1SvImJ_T0072705.1 MGP_129S1SvImJ_G0029759.1 mouse_genomes_project 5 94409761 94410529 - Ccni protein_coding retained_intron MGP_129S1SvImJ_T0072706.1 MGP_129S1SvImJ_G0029759.1 mouse_genomes_project 5 94410070 94425692 - MGP_129S1SvImJ_P0072706 Ccni protein_coding protein_coding MGP_129S1SvImJ_T0072707.1 MGP_129S1SvImJ_G0029759.1 mouse_genomes_project 5 94411872 94428756 - MGP_129S1SvImJ_P0072707 Ccni protein_coding protein_coding MGP_129S1SvImJ_T0101184.1 MGP_129S1SvImJ_G0039251.1 mouse_genomes_project 5 53950491 53950620 + Gm24235 snoRNA snoRNA MGP_129S1SvImJ_T0073491.1 MGP_129S1SvImJ_G0029929.1 mouse_genomes_project 5 116738441 116802743 - MGP_129S1SvImJ_P0073491 Svop protein_coding protein_coding MGP_129S1SvImJ_T0073492.1 MGP_129S1SvImJ_G0029929.1 mouse_genomes_project 5 116739654 116777630 - Svop protein_coding processed_transcript MGP_129S1SvImJ_T0073493.1 MGP_129S1SvImJ_G0029929.1 mouse_genomes_project 5 116746483 116754398 - Svop protein_coding retained_intron MGP_129S1SvImJ_T0073494.1 MGP_129S1SvImJ_G0029929.1 mouse_genomes_project 5 116765295 116802553 - Svop protein_coding retained_intron MGP_129S1SvImJ_T0073495.1 MGP_129S1SvImJ_G0029929.1 mouse_genomes_project 5 116766062 116802540 - MGP_129S1SvImJ_P0073495 Svop protein_coding protein_coding MGP_129S1SvImJ_T0004854.1 MGP_129S1SvImJ_G0004181.1 mouse_genomes_project 5 128034657 128035369 + Gm42425 antisense antisense MGP_129S1SvImJ_T0070551.1 MGP_129S1SvImJ_G0029365.1 mouse_genomes_project 5 24670471 24704725 + Dpp6 protein_coding processed_transcript MGP_129S1SvImJ_T0070552.1 MGP_129S1SvImJ_G0029365.1 mouse_genomes_project 5 24670625 25599030 + MGP_129S1SvImJ_P0070552 Dpp6 protein_coding protein_coding MGP_129S1SvImJ_T0070553.1 MGP_129S1SvImJ_G0029365.1 mouse_genomes_project 5 24670702 25318173 + Dpp6 protein_coding retained_intron MGP_129S1SvImJ_T0070554.1 MGP_129S1SvImJ_G0029365.1 mouse_genomes_project 5 24759473 25600092 + MGP_129S1SvImJ_P0070554 Dpp6 protein_coding protein_coding MGP_129S1SvImJ_T0070555.1 MGP_129S1SvImJ_G0029365.1 mouse_genomes_project 5 24910572 25600088 + MGP_129S1SvImJ_P0070555 Dpp6 protein_coding protein_coding MGP_129S1SvImJ_T0070556.1 MGP_129S1SvImJ_G0029365.1 mouse_genomes_project 5 24910760 24913466 + Dpp6 protein_coding retained_intron MGP_129S1SvImJ_T0070557.1 MGP_129S1SvImJ_G0029365.1 mouse_genomes_project 5 25125423 25600087 + MGP_129S1SvImJ_P0070557 Dpp6 protein_coding protein_coding MGP_129S1SvImJ_T0070558.1 MGP_129S1SvImJ_G0029365.1 mouse_genomes_project 5 25125423 25260185 + MGP_129S1SvImJ_P0070558 Dpp6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070559.1 MGP_129S1SvImJ_G0029365.1 mouse_genomes_project 5 25399879 25569528 + Dpp6 protein_coding retained_intron MGP_129S1SvImJ_T0070603.1 MGP_129S1SvImJ_G0029376.1 mouse_genomes_project 5 27402612 27408031 - MGP_129S1SvImJ_P0070603 Mnx1 protein_coding protein_coding MGP_129S1SvImJ_T0070604.1 MGP_129S1SvImJ_G0029376.1 mouse_genomes_project 5 27402839 27408031 - MGP_129S1SvImJ_P0070604 Mnx1 protein_coding protein_coding MGP_129S1SvImJ_T0070313.1 MGP_129S1SvImJ_G0029319.1 mouse_genomes_project 5 19097802 19106595 + Lrrc17 protein_coding processed_transcript MGP_129S1SvImJ_T0070314.1 MGP_129S1SvImJ_G0029319.1 mouse_genomes_project 5 19097806 19129698 + MGP_129S1SvImJ_P0070314 Lrrc17 protein_coding protein_coding MGP_129S1SvImJ_T0070976.1 MGP_129S1SvImJ_G0029435.1 mouse_genomes_project 5 30553270 30590216 + MGP_129S1SvImJ_P0070976 Ppp1cb protein_coding protein_coding MGP_129S1SvImJ_T0070977.1 MGP_129S1SvImJ_G0029435.1 mouse_genomes_project 5 30553579 30615437 + MGP_129S1SvImJ_P0070977 Ppp1cb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070978.1 MGP_129S1SvImJ_G0029435.1 mouse_genomes_project 5 30553613 30558171 + Ppp1cb protein_coding retained_intron MGP_129S1SvImJ_T0070979.1 MGP_129S1SvImJ_G0029435.1 mouse_genomes_project 5 30553649 30585732 + MGP_129S1SvImJ_P0070979 Ppp1cb protein_coding protein_coding MGP_129S1SvImJ_T0070980.1 MGP_129S1SvImJ_G0029435.1 mouse_genomes_project 5 30572090 30580008 + Ppp1cb protein_coding processed_transcript MGP_129S1SvImJ_T0070981.1 MGP_129S1SvImJ_G0029435.1 mouse_genomes_project 5 30580665 30587453 + MGP_129S1SvImJ_P0070981 Ppp1cb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0011613.1 MGP_129S1SvImJ_G0009729.1 mouse_genomes_project 5 37797274 37797520 + Gm25505 misc_RNA misc_RNA MGP_129S1SvImJ_T0015126.1 MGP_129S1SvImJ_G0013215.1 mouse_genomes_project 5 108888094 108889592 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010748.1 MGP_129S1SvImJ_G0008864.1 mouse_genomes_project 5 142960726 142960810 - Mir25 miRNA miRNA MGP_129S1SvImJ_T0010683.1 MGP_129S1SvImJ_G0008799.1 mouse_genomes_project 5 11134022 11134127 - Gm24054 miRNA miRNA MGP_129S1SvImJ_T0072708.1 MGP_129S1SvImJ_G0029760.1 mouse_genomes_project 5 94428845 94435805 + MGP_129S1SvImJ_P0072708 2010109A12Rik protein_coding protein_coding MGP_129S1SvImJ_T0072709.1 MGP_129S1SvImJ_G0029760.1 mouse_genomes_project 5 94428860 94429775 + 2010109A12Rik protein_coding retained_intron MGP_129S1SvImJ_T0010696.1 MGP_129S1SvImJ_G0008812.1 mouse_genomes_project 5 40484841 40484923 + Mir6414 miRNA miRNA MGP_129S1SvImJ_T0001605.1 MGP_129S1SvImJ_G0001522.1 mouse_genomes_project 5 50414914 50416455 - TEC TEC MGP_129S1SvImJ_T0004848.1 MGP_129S1SvImJ_G0004178.1 mouse_genomes_project 5 127133639 127137948 - Gm15747 antisense antisense MGP_129S1SvImJ_T0004849.1 MGP_129S1SvImJ_G0004178.1 mouse_genomes_project 5 127133650 127135055 - Gm15747 antisense antisense MGP_129S1SvImJ_T0004820.1 MGP_129S1SvImJ_G0004159.1 mouse_genomes_project 5 121065018 121068812 - Gm26995 antisense antisense MGP_129S1SvImJ_T0014887.1 MGP_129S1SvImJ_G0012976.1 mouse_genomes_project 5 13223659 13223903 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101722.1 MGP_129S1SvImJ_G0039726.1 mouse_genomes_project 5 73376637 73377501 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101723.1 MGP_129S1SvImJ_G0039726.1 mouse_genomes_project 5 73376682 73390507 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101724.1 MGP_129S1SvImJ_G0039726.1 mouse_genomes_project 5 73390330 73390784 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0072004.1 MGP_129S1SvImJ_G0029604.1 mouse_genomes_project 5 69419920 69437599 - MGP_129S1SvImJ_P0072004 Gnpda2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072005.1 MGP_129S1SvImJ_G0029604.1 mouse_genomes_project 5 69421809 69439148 - MGP_129S1SvImJ_P0072005 Gnpda2 protein_coding protein_coding MGP_129S1SvImJ_T0072006.1 MGP_129S1SvImJ_G0029604.1 mouse_genomes_project 5 69421978 69437635 - MGP_129S1SvImJ_P0072006 Gnpda2 protein_coding protein_coding MGP_129S1SvImJ_T0072007.1 MGP_129S1SvImJ_G0029604.1 mouse_genomes_project 5 69421983 69439054 - Gnpda2 protein_coding retained_intron MGP_129S1SvImJ_T0072008.1 MGP_129S1SvImJ_G0029604.1 mouse_genomes_project 5 69422620 69439082 - MGP_129S1SvImJ_P0072008 Gnpda2 protein_coding protein_coding MGP_129S1SvImJ_T0072009.1 MGP_129S1SvImJ_G0029604.1 mouse_genomes_project 5 69423550 69439101 - MGP_129S1SvImJ_P0072009 Gnpda2 protein_coding protein_coding MGP_129S1SvImJ_T0072010.1 MGP_129S1SvImJ_G0029604.1 mouse_genomes_project 5 69431807 69439097 - MGP_129S1SvImJ_P0072010 Gnpda2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0008138.1 MGP_129S1SvImJ_G0006635.1 mouse_genomes_project 5 44644543 44650912 - 4930405L22Rik lincRNA lincRNA MGP_129S1SvImJ_T0073230.1 MGP_129S1SvImJ_G0029880.1 mouse_genomes_project 5 112571971 112572692 + MGP_129S1SvImJ_P0073230 Chfr protein_coding protein_coding MGP_129S1SvImJ_T0073231.1 MGP_129S1SvImJ_G0029880.1 mouse_genomes_project 5 112571978 112606750 + MGP_129S1SvImJ_P0073231 Chfr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073232.1 MGP_129S1SvImJ_G0029880.1 mouse_genomes_project 5 112571978 112614953 + MGP_129S1SvImJ_P0073232 Chfr protein_coding protein_coding MGP_129S1SvImJ_T0073233.1 MGP_129S1SvImJ_G0029880.1 mouse_genomes_project 5 112571980 112614502 + MGP_129S1SvImJ_P0073233 Chfr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073234.1 MGP_129S1SvImJ_G0029880.1 mouse_genomes_project 5 112571986 112614641 + MGP_129S1SvImJ_P0073234 Chfr protein_coding protein_coding MGP_129S1SvImJ_T0073235.1 MGP_129S1SvImJ_G0029880.1 mouse_genomes_project 5 112571989 112611386 + Chfr protein_coding retained_intron MGP_129S1SvImJ_T0073236.1 MGP_129S1SvImJ_G0029880.1 mouse_genomes_project 5 112571989 112614954 + MGP_129S1SvImJ_P0073236 Chfr protein_coding protein_coding MGP_129S1SvImJ_T0073237.1 MGP_129S1SvImJ_G0029880.1 mouse_genomes_project 5 112572007 112614951 + MGP_129S1SvImJ_P0073237 Chfr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073238.1 MGP_129S1SvImJ_G0029880.1 mouse_genomes_project 5 112572036 112587723 + MGP_129S1SvImJ_P0073238 Chfr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073239.1 MGP_129S1SvImJ_G0029880.1 mouse_genomes_project 5 112572054 112584835 + MGP_129S1SvImJ_P0073239 Chfr protein_coding protein_coding MGP_129S1SvImJ_T0073240.1 MGP_129S1SvImJ_G0029880.1 mouse_genomes_project 5 112597773 112605897 + Chfr protein_coding retained_intron MGP_129S1SvImJ_T0073241.1 MGP_129S1SvImJ_G0029880.1 mouse_genomes_project 5 112606748 112613987 + Chfr protein_coding retained_intron MGP_129S1SvImJ_T0001578.1 MGP_129S1SvImJ_G0001496.1 mouse_genomes_project 5 47432056 47434541 - TEC TEC MGP_129S1SvImJ_T0015159.1 MGP_129S1SvImJ_G0013248.1 mouse_genomes_project 5 118108089 118108391 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008332.1 MGP_129S1SvImJ_G0006774.1 mouse_genomes_project 5 119277377 119279592 + Gm13839 lincRNA lincRNA MGP_129S1SvImJ_T0004768.1 MGP_129S1SvImJ_G0004123.1 mouse_genomes_project 5 102176614 102183396 + Gm15777 antisense antisense MGP_129S1SvImJ_T0010698.1 MGP_129S1SvImJ_G0008814.1 mouse_genomes_project 5 51093295 51093411 - Mir6417 miRNA miRNA MGP_129S1SvImJ_T0008377.1 MGP_129S1SvImJ_G0006806.1 mouse_genomes_project 5 129064600 129102097 - Gm42637 lincRNA lincRNA MGP_129S1SvImJ_T0015139.1 MGP_129S1SvImJ_G0013228.1 mouse_genomes_project 5 111172068 111175168 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008442.1 MGP_129S1SvImJ_G0006850.1 mouse_genomes_project 5 148723642 148727372 - Gm42504 lincRNA lincRNA MGP_129S1SvImJ_T0008141.1 MGP_129S1SvImJ_G0006638.1 mouse_genomes_project 5 51072487 51073699 + Gm43177 lincRNA lincRNA MGP_129S1SvImJ_T0073573.1 MGP_129S1SvImJ_G0029944.1 mouse_genomes_project 5 117498674 117548353 - MGP_129S1SvImJ_P0073573 Git2 protein_coding protein_coding MGP_129S1SvImJ_T0073574.1 MGP_129S1SvImJ_G0029944.1 mouse_genomes_project 5 117498675 117548350 - MGP_129S1SvImJ_P0073574 Git2 protein_coding protein_coding MGP_129S1SvImJ_T0073575.1 MGP_129S1SvImJ_G0029944.1 mouse_genomes_project 5 117498678 117518776 - MGP_129S1SvImJ_P0073575 Git2 protein_coding protein_coding MGP_129S1SvImJ_T0073576.1 MGP_129S1SvImJ_G0029944.1 mouse_genomes_project 5 117498678 117548292 - MGP_129S1SvImJ_P0073576 Git2 protein_coding protein_coding MGP_129S1SvImJ_T0073577.1 MGP_129S1SvImJ_G0029944.1 mouse_genomes_project 5 117498678 117548350 - MGP_129S1SvImJ_P0073577 Git2 protein_coding protein_coding MGP_129S1SvImJ_T0073578.1 MGP_129S1SvImJ_G0029944.1 mouse_genomes_project 5 117500843 117548320 - MGP_129S1SvImJ_P0073578 Git2 protein_coding protein_coding MGP_129S1SvImJ_T0073579.1 MGP_129S1SvImJ_G0029944.1 mouse_genomes_project 5 117501138 117548353 - MGP_129S1SvImJ_P0073579 Git2 protein_coding protein_coding MGP_129S1SvImJ_T0073580.1 MGP_129S1SvImJ_G0029944.1 mouse_genomes_project 5 117507375 117508326 - Git2 protein_coding processed_transcript MGP_129S1SvImJ_T0073581.1 MGP_129S1SvImJ_G0029944.1 mouse_genomes_project 5 117508023 117523149 - MGP_129S1SvImJ_P0073581 Git2 protein_coding protein_coding MGP_129S1SvImJ_T0073582.1 MGP_129S1SvImJ_G0029944.1 mouse_genomes_project 5 117513300 117516270 - Git2 protein_coding retained_intron MGP_129S1SvImJ_T0073583.1 MGP_129S1SvImJ_G0029944.1 mouse_genomes_project 5 117522198 117548353 - Git2 protein_coding retained_intron MGP_129S1SvImJ_T0073584.1 MGP_129S1SvImJ_G0029944.1 mouse_genomes_project 5 117523086 117541393 - MGP_129S1SvImJ_P0073584 Git2 protein_coding protein_coding MGP_129S1SvImJ_T0073585.1 MGP_129S1SvImJ_G0029944.1 mouse_genomes_project 5 117529121 117536559 - Git2 protein_coding retained_intron MGP_129S1SvImJ_T0073586.1 MGP_129S1SvImJ_G0029944.1 mouse_genomes_project 5 117539224 117550544 - MGP_129S1SvImJ_P0073586 Git2 protein_coding protein_coding MGP_129S1SvImJ_T0073587.1 MGP_129S1SvImJ_G0029944.1 mouse_genomes_project 5 117539328 117548353 - Git2 protein_coding processed_transcript MGP_129S1SvImJ_T0073588.1 MGP_129S1SvImJ_G0029944.1 mouse_genomes_project 5 117539415 117542022 - Git2 protein_coding processed_transcript MGP_129S1SvImJ_T0073589.1 MGP_129S1SvImJ_G0029944.1 mouse_genomes_project 5 117540544 117548325 - Git2 protein_coding retained_intron MGP_129S1SvImJ_T0008058.1 MGP_129S1SvImJ_G0006582.1 mouse_genomes_project 5 13251866 13263196 - Gm3510 lincRNA lincRNA MGP_129S1SvImJ_T0075912.1 MGP_129S1SvImJ_G0030384.1 mouse_genomes_project 5 152706216 152708250 + MGP_129S1SvImJ_P0075912 Polr1d protein_coding protein_coding MGP_129S1SvImJ_T0075913.1 MGP_129S1SvImJ_G0030384.1 mouse_genomes_project 5 152706512 152742780 + MGP_129S1SvImJ_P0075913 Polr1d protein_coding protein_coding MGP_129S1SvImJ_T0075914.1 MGP_129S1SvImJ_G0030384.1 mouse_genomes_project 5 152706714 152743016 + MGP_129S1SvImJ_P0075914 Polr1d protein_coding protein_coding MGP_129S1SvImJ_T0075915.1 MGP_129S1SvImJ_G0030384.1 mouse_genomes_project 5 152706730 152742993 + MGP_129S1SvImJ_P0075915 Polr1d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075916.1 MGP_129S1SvImJ_G0030384.1 mouse_genomes_project 5 152732536 152742290 + Polr1d protein_coding retained_intron MGP_129S1SvImJ_T0075917.1 MGP_129S1SvImJ_G0030384.1 mouse_genomes_project 5 152736773 152742406 + Polr1d protein_coding processed_transcript MGP_129S1SvImJ_T0004786.1 MGP_129S1SvImJ_G0004134.1 mouse_genomes_project 5 110980523 111148294 + antisense antisense MGP_129S1SvImJ_T0073839.1 MGP_129S1SvImJ_G0029993.1 mouse_genomes_project 5 121212084 121308459 - MGP_129S1SvImJ_P0073839 Fbxw8 protein_coding protein_coding MGP_129S1SvImJ_T0073840.1 MGP_129S1SvImJ_G0029993.1 mouse_genomes_project 5 121224174 121308421 - Fbxw8 protein_coding retained_intron MGP_129S1SvImJ_T0015231.1 MGP_129S1SvImJ_G0013320.1 mouse_genomes_project 5 151811679 151812551 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073117.1 MGP_129S1SvImJ_G0029850.1 mouse_genomes_project 5 110173615 110200599 - MGP_129S1SvImJ_P0073117 Tmed5 protein_coding protein_coding MGP_129S1SvImJ_T0073118.1 MGP_129S1SvImJ_G0029850.1 mouse_genomes_project 5 110184945 110200617 - MGP_129S1SvImJ_P0073118 Tmed5 protein_coding protein_coding MGP_129S1SvImJ_T0073119.1 MGP_129S1SvImJ_G0029850.1 mouse_genomes_project 5 110188672 110200654 - MGP_129S1SvImJ_P0073119 Tmed5 protein_coding protein_coding MGP_129S1SvImJ_T0073120.1 MGP_129S1SvImJ_G0029850.1 mouse_genomes_project 5 110190098 110200583 - MGP_129S1SvImJ_P0073120 Tmed5 protein_coding protein_coding MGP_129S1SvImJ_T0073121.1 MGP_129S1SvImJ_G0029850.1 mouse_genomes_project 5 110197502 110200567 - MGP_129S1SvImJ_P0073121 Tmed5 protein_coding protein_coding MGP_129S1SvImJ_T0073122.1 MGP_129S1SvImJ_G0029850.1 mouse_genomes_project 5 110197757 110200564 - MGP_129S1SvImJ_P0073122 Tmed5 protein_coding protein_coding MGP_129S1SvImJ_T0015187.1 MGP_129S1SvImJ_G0013276.1 mouse_genomes_project 5 140494428 140494585 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0074454.1 MGP_129S1SvImJ_G0030098.1 mouse_genomes_project 5 128323038 128361420 - MGP_129S1SvImJ_P0074454 Rilpl1 protein_coding protein_coding MGP_129S1SvImJ_T0074455.1 MGP_129S1SvImJ_G0030098.1 mouse_genomes_project 5 128323495 128334563 - MGP_129S1SvImJ_P0074455 Rilpl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074456.1 MGP_129S1SvImJ_G0030098.1 mouse_genomes_project 5 128323610 128345259 - MGP_129S1SvImJ_P0074456 Rilpl1 protein_coding protein_coding MGP_129S1SvImJ_T0074457.1 MGP_129S1SvImJ_G0030098.1 mouse_genomes_project 5 128323622 128345343 - MGP_129S1SvImJ_P0074457 Rilpl1 protein_coding protein_coding MGP_129S1SvImJ_T0008428.1 MGP_129S1SvImJ_G0006837.1 mouse_genomes_project 5 142266058 142267014 + 9130604C24Rik lincRNA lincRNA MGP_129S1SvImJ_T0073788.1 MGP_129S1SvImJ_G0029984.1 mouse_genomes_project 5 120177644 120344894 + MGP_129S1SvImJ_P0073788 Taok3 protein_coding protein_coding MGP_129S1SvImJ_T0073789.1 MGP_129S1SvImJ_G0029984.1 mouse_genomes_project 5 120183816 120267502 + MGP_129S1SvImJ_P0073789 Taok3 protein_coding protein_coding MGP_129S1SvImJ_T0073790.1 MGP_129S1SvImJ_G0029984.1 mouse_genomes_project 5 120192584 120259572 + Taok3 protein_coding retained_intron MGP_129S1SvImJ_T0073791.1 MGP_129S1SvImJ_G0029984.1 mouse_genomes_project 5 120192584 120344752 + MGP_129S1SvImJ_P0073791 Taok3 protein_coding protein_coding MGP_129S1SvImJ_T0073792.1 MGP_129S1SvImJ_G0029984.1 mouse_genomes_project 5 120192591 120344896 + MGP_129S1SvImJ_P0073792 Taok3 protein_coding protein_coding MGP_129S1SvImJ_T0073793.1 MGP_129S1SvImJ_G0029984.1 mouse_genomes_project 5 120192611 120306219 + Taok3 protein_coding retained_intron MGP_129S1SvImJ_T0073794.1 MGP_129S1SvImJ_G0029984.1 mouse_genomes_project 5 120192614 120319136 + MGP_129S1SvImJ_P0073794 Taok3 protein_coding protein_coding MGP_129S1SvImJ_T0073795.1 MGP_129S1SvImJ_G0029984.1 mouse_genomes_project 5 120192637 120249784 + Taok3 protein_coding retained_intron MGP_129S1SvImJ_T0073796.1 MGP_129S1SvImJ_G0029984.1 mouse_genomes_project 5 120267483 120293846 + MGP_129S1SvImJ_P0073796 Taok3 protein_coding protein_coding MGP_129S1SvImJ_T0073797.1 MGP_129S1SvImJ_G0029984.1 mouse_genomes_project 5 120305230 120343556 + MGP_129S1SvImJ_P0073797 Taok3 protein_coding protein_coding MGP_129S1SvImJ_T0072366.1 MGP_129S1SvImJ_G0029665.1 mouse_genomes_project 5 86941496 87005604 - MGP_129S1SvImJ_P0072366 Uba6 protein_coding protein_coding MGP_129S1SvImJ_T0072367.1 MGP_129S1SvImJ_G0029665.1 mouse_genomes_project 5 86950906 87005605 - Uba6 protein_coding retained_intron MGP_129S1SvImJ_T0072528.1 MGP_129S1SvImJ_G0029719.1 mouse_genomes_project 5 91291006 91436055 - MGP_129S1SvImJ_P0072528 Ankrd17 protein_coding protein_coding MGP_129S1SvImJ_T0072529.1 MGP_129S1SvImJ_G0029719.1 mouse_genomes_project 5 91291659 91296304 - Ankrd17 protein_coding retained_intron MGP_129S1SvImJ_T0072530.1 MGP_129S1SvImJ_G0029719.1 mouse_genomes_project 5 91292137 91436042 - MGP_129S1SvImJ_P0072530 Ankrd17 protein_coding protein_coding MGP_129S1SvImJ_T0072531.1 MGP_129S1SvImJ_G0029719.1 mouse_genomes_project 5 91292305 91435701 - MGP_129S1SvImJ_P0072531 Ankrd17 protein_coding protein_coding MGP_129S1SvImJ_T0072532.1 MGP_129S1SvImJ_G0029719.1 mouse_genomes_project 5 91292581 91405682 - MGP_129S1SvImJ_P0072532 Ankrd17 protein_coding protein_coding MGP_129S1SvImJ_T0072533.1 MGP_129S1SvImJ_G0029719.1 mouse_genomes_project 5 91293122 91434304 - MGP_129S1SvImJ_P0072533 Ankrd17 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0072534.1 MGP_129S1SvImJ_G0029719.1 mouse_genomes_project 5 91301403 91304678 - Ankrd17 protein_coding retained_intron MGP_129S1SvImJ_T0072535.1 MGP_129S1SvImJ_G0029719.1 mouse_genomes_project 5 91317653 91369610 - Ankrd17 protein_coding retained_intron MGP_129S1SvImJ_T0072536.1 MGP_129S1SvImJ_G0029719.1 mouse_genomes_project 5 91318297 91327399 - Ankrd17 protein_coding retained_intron MGP_129S1SvImJ_T0072537.1 MGP_129S1SvImJ_G0029719.1 mouse_genomes_project 5 91324083 91330610 - Ankrd17 protein_coding retained_intron MGP_129S1SvImJ_T0072538.1 MGP_129S1SvImJ_G0029719.1 mouse_genomes_project 5 91331144 91339895 - Ankrd17 protein_coding retained_intron MGP_129S1SvImJ_T0072539.1 MGP_129S1SvImJ_G0029719.1 mouse_genomes_project 5 91340764 91342941 - Ankrd17 protein_coding retained_intron MGP_129S1SvImJ_T0072540.1 MGP_129S1SvImJ_G0029719.1 mouse_genomes_project 5 91356650 91359491 - Ankrd17 protein_coding retained_intron MGP_129S1SvImJ_T0072541.1 MGP_129S1SvImJ_G0029719.1 mouse_genomes_project 5 91432483 91435658 - Ankrd17 protein_coding retained_intron MGP_129S1SvImJ_T0004910.1 MGP_129S1SvImJ_G0004220.1 mouse_genomes_project 5 153064841 153067217 + Gm26597 antisense antisense MGP_129S1SvImJ_T0098756.1 MGP_129S1SvImJ_G0036841.1 mouse_genomes_project 5 1865987 1866115 - Gm22897 scaRNA scaRNA MGP_129S1SvImJ_T0001917.1 MGP_129S1SvImJ_G0001830.1 mouse_genomes_project 5 148636280 148637306 + TEC TEC MGP_129S1SvImJ_T0001587.1 MGP_129S1SvImJ_G0001504.1 mouse_genomes_project 5 47812370 47813678 - TEC TEC MGP_129S1SvImJ_T0072479.1 MGP_129S1SvImJ_G0029705.1 mouse_genomes_project 5 89389050 89398909 + MGP_129S1SvImJ_P0072479 Amtn protein_coding protein_coding MGP_129S1SvImJ_T0001828.1 MGP_129S1SvImJ_G0001743.1 mouse_genomes_project 5 125782588 125784926 + TEC TEC MGP_129S1SvImJ_T0072570.1 MGP_129S1SvImJ_G0029730.1 mouse_genomes_project 5 91892502 91901123 + MGP_129S1SvImJ_P0072570 Cxcl15 protein_coding protein_coding MGP_129S1SvImJ_T0015040.1 MGP_129S1SvImJ_G0013129.1 mouse_genomes_project 5 70399073 70399687 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004689.1 MGP_129S1SvImJ_G0004065.1 mouse_genomes_project 5 35204578 35207863 - Ppp2r2cos antisense antisense MGP_129S1SvImJ_T0076088.1 MGP_129S1SvImJ_G0030412.1 mouse_genomes_project 5 156551128 156590408 - N4bp2l2 protein_coding processed_transcript MGP_129S1SvImJ_T0076089.1 MGP_129S1SvImJ_G0030412.1 mouse_genomes_project 5 156579038 156612821 - MGP_129S1SvImJ_P0076089 N4bp2l2 protein_coding protein_coding MGP_129S1SvImJ_T0076090.1 MGP_129S1SvImJ_G0030412.1 mouse_genomes_project 5 156583802 156591150 - N4bp2l2 protein_coding retained_intron MGP_129S1SvImJ_T0076091.1 MGP_129S1SvImJ_G0030412.1 mouse_genomes_project 5 156586066 156607209 - MGP_129S1SvImJ_P0076091 N4bp2l2 protein_coding protein_coding MGP_129S1SvImJ_T0076092.1 MGP_129S1SvImJ_G0030412.1 mouse_genomes_project 5 156586079 156590682 - N4bp2l2 protein_coding retained_intron MGP_129S1SvImJ_T0076093.1 MGP_129S1SvImJ_G0030412.1 mouse_genomes_project 5 156591098 156612786 - N4bp2l2 protein_coding retained_intron MGP_129S1SvImJ_T0076094.1 MGP_129S1SvImJ_G0030412.1 mouse_genomes_project 5 156608138 156612555 - MGP_129S1SvImJ_P0076094 N4bp2l2 protein_coding protein_coding MGP_129S1SvImJ_T0076095.1 MGP_129S1SvImJ_G0030412.1 mouse_genomes_project 5 156612383 156613392 - N4bp2l2 protein_coding retained_intron MGP_129S1SvImJ_T0015213.1 MGP_129S1SvImJ_G0013302.1 mouse_genomes_project 5 148375548 148375768 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073628.1 MGP_129S1SvImJ_G0029955.1 mouse_genomes_project 5 117826067 117927555 + MGP_129S1SvImJ_P0073628 Sppl3 protein_coding protein_coding MGP_129S1SvImJ_T0073629.1 MGP_129S1SvImJ_G0029955.1 mouse_genomes_project 5 117826076 117881658 + Sppl3 protein_coding processed_transcript MGP_129S1SvImJ_T0073630.1 MGP_129S1SvImJ_G0029955.1 mouse_genomes_project 5 117826424 117909231 + MGP_129S1SvImJ_P0073630 Sppl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073631.1 MGP_129S1SvImJ_G0029955.1 mouse_genomes_project 5 117896681 117899187 + Sppl3 protein_coding retained_intron MGP_129S1SvImJ_T0073632.1 MGP_129S1SvImJ_G0029955.1 mouse_genomes_project 5 117923522 117927020 + Sppl3 protein_coding retained_intron MGP_129S1SvImJ_T0073676.1 MGP_129S1SvImJ_G0029965.1 mouse_genomes_project 5 118175922 118184032 + MGP_129S1SvImJ_P0073676 Srsf9 protein_coding protein_coding MGP_129S1SvImJ_T0073677.1 MGP_129S1SvImJ_G0029965.1 mouse_genomes_project 5 118178604 118183961 + Srsf9 protein_coding processed_transcript MGP_129S1SvImJ_T0073678.1 MGP_129S1SvImJ_G0029965.1 mouse_genomes_project 5 118179591 118183602 + Srsf9 protein_coding processed_transcript MGP_129S1SvImJ_T0073679.1 MGP_129S1SvImJ_G0029965.1 mouse_genomes_project 5 118181529 118183961 + MGP_129S1SvImJ_P0073679 Srsf9 protein_coding protein_coding MGP_129S1SvImJ_T0014921.1 MGP_129S1SvImJ_G0013010.1 mouse_genomes_project 5 21717054 21717579 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004739.1 MGP_129S1SvImJ_G0004104.1 mouse_genomes_project 5 77145906 77146384 + 2310040G07Rik antisense antisense MGP_129S1SvImJ_T0004740.1 MGP_129S1SvImJ_G0004104.1 mouse_genomes_project 5 77146146 77161475 + 2310040G07Rik antisense antisense MGP_129S1SvImJ_T0099956.1 MGP_129S1SvImJ_G0038023.1 mouse_genomes_project 5 113235484 113235591 + Gm22583 snRNA snRNA MGP_129S1SvImJ_T0071487.1 MGP_129S1SvImJ_G0029518.1 mouse_genomes_project 5 40342973 40346000 - MGP_129S1SvImJ_P0071487 Nkx3-2 protein_coding protein_coding MGP_129S1SvImJ_T0070149.1 MGP_129S1SvImJ_G0029285.1 mouse_genomes_project 5 5460794 5604752 - MGP_129S1SvImJ_P0070149 Rundc3b protein_coding protein_coding MGP_129S1SvImJ_T0070150.1 MGP_129S1SvImJ_G0029285.1 mouse_genomes_project 5 5462727 5604752 - MGP_129S1SvImJ_P0070150 Rundc3b protein_coding protein_coding MGP_129S1SvImJ_T0074417.1 MGP_129S1SvImJ_G0030093.1 mouse_genomes_project 5 128149481 128156158 - MGP_129S1SvImJ_P0074417 protein_coding protein_coding MGP_129S1SvImJ_T0074418.1 MGP_129S1SvImJ_G0030093.1 mouse_genomes_project 5 128149937 128171730 - MGP_129S1SvImJ_P0074418 protein_coding protein_coding MGP_129S1SvImJ_T0001773.1 MGP_129S1SvImJ_G0001688.1 mouse_genomes_project 5 110672083 110675366 - TEC TEC MGP_129S1SvImJ_T0015160.1 MGP_129S1SvImJ_G0013249.1 mouse_genomes_project 5 118141217 118141355 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015121.1 MGP_129S1SvImJ_G0013210.1 mouse_genomes_project 5 107912112 107912722 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072774.1 MGP_129S1SvImJ_G0029778.1 mouse_genomes_project 5 100604180 100641180 - MGP_129S1SvImJ_P0072774 protein_coding protein_coding MGP_129S1SvImJ_T0072775.1 MGP_129S1SvImJ_G0029778.1 mouse_genomes_project 5 100604180 100641180 - MGP_129S1SvImJ_P0072775 protein_coding protein_coding MGP_129S1SvImJ_T0072776.1 MGP_129S1SvImJ_G0029778.1 mouse_genomes_project 5 100605528 100631443 - MGP_129S1SvImJ_P0072776 protein_coding protein_coding MGP_129S1SvImJ_T0072777.1 MGP_129S1SvImJ_G0029778.1 mouse_genomes_project 5 100616003 100622280 - protein_coding retained_intron MGP_129S1SvImJ_T0070095.1 MGP_129S1SvImJ_G0029277.1 mouse_genomes_project 5 3703150 4319325 - MGP_129S1SvImJ_P0070095 Zfp804b protein_coding protein_coding MGP_129S1SvImJ_T0070096.1 MGP_129S1SvImJ_G0029277.1 mouse_genomes_project 5 3703170 3818158 - MGP_129S1SvImJ_P0070096 Zfp804b protein_coding protein_coding MGP_129S1SvImJ_T0075351.1 MGP_129S1SvImJ_G0030264.1 mouse_genomes_project 5 143109448 143113785 - MGP_129S1SvImJ_P0075351 BC037034 protein_coding protein_coding MGP_129S1SvImJ_T0075352.1 MGP_129S1SvImJ_G0030264.1 mouse_genomes_project 5 143109450 143113131 - MGP_129S1SvImJ_P0075352 BC037034 protein_coding protein_coding MGP_129S1SvImJ_T0075353.1 MGP_129S1SvImJ_G0030264.1 mouse_genomes_project 5 143109451 143113781 - MGP_129S1SvImJ_P0075353 BC037034 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075354.1 MGP_129S1SvImJ_G0030264.1 mouse_genomes_project 5 143109452 143113824 - BC037034 protein_coding retained_intron MGP_129S1SvImJ_T0075355.1 MGP_129S1SvImJ_G0030264.1 mouse_genomes_project 5 143109895 143110736 - MGP_129S1SvImJ_P0075355 BC037034 protein_coding protein_coding MGP_129S1SvImJ_T0075356.1 MGP_129S1SvImJ_G0030264.1 mouse_genomes_project 5 143111360 143111985 - BC037034 protein_coding retained_intron MGP_129S1SvImJ_T0075357.1 MGP_129S1SvImJ_G0030264.1 mouse_genomes_project 5 143112043 143112929 - BC037034 protein_coding retained_intron MGP_129S1SvImJ_T0099928.1 MGP_129S1SvImJ_G0037995.1 mouse_genomes_project 5 72217618 72217716 - Gm25768 snRNA snRNA MGP_129S1SvImJ_T0015244.1 MGP_129S1SvImJ_G0013333.1 mouse_genomes_project 5 156384837 156385401 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001465.1 MGP_129S1SvImJ_G0001386.1 mouse_genomes_project 5 6640884 6650292 - TEC TEC MGP_129S1SvImJ_T0015081.1 MGP_129S1SvImJ_G0013170.1 mouse_genomes_project 5 89429791 89430340 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008142.1 MGP_129S1SvImJ_G0006639.1 mouse_genomes_project 5 51159905 51180615 - C130083M11Rik lincRNA lincRNA MGP_129S1SvImJ_T0010689.1 MGP_129S1SvImJ_G0008805.1 mouse_genomes_project 5 28604417 28604497 + Mir5625 miRNA miRNA MGP_129S1SvImJ_T0101201.1 MGP_129S1SvImJ_G0039268.1 mouse_genomes_project 5 88688239 88688362 + Gm25066 snoRNA snoRNA MGP_129S1SvImJ_T0015055.1 MGP_129S1SvImJ_G0013144.1 mouse_genomes_project 5 76586881 76587033 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070611.1 MGP_129S1SvImJ_G0029379.1 mouse_genomes_project 5 27684189 27744498 + MGP_129S1SvImJ_P0070611 Dnajb6 protein_coding protein_coding MGP_129S1SvImJ_T0070612.1 MGP_129S1SvImJ_G0029379.1 mouse_genomes_project 5 27684490 27740626 + MGP_129S1SvImJ_P0070612 Dnajb6 protein_coding protein_coding MGP_129S1SvImJ_T0070613.1 MGP_129S1SvImJ_G0029379.1 mouse_genomes_project 5 27684496 27711211 + MGP_129S1SvImJ_P0070613 Dnajb6 protein_coding protein_coding MGP_129S1SvImJ_T0070614.1 MGP_129S1SvImJ_G0029379.1 mouse_genomes_project 5 27684525 27687604 + Dnajb6 protein_coding processed_transcript MGP_129S1SvImJ_T0070615.1 MGP_129S1SvImJ_G0029379.1 mouse_genomes_project 5 27684534 27783385 + MGP_129S1SvImJ_P0070615 Dnajb6 protein_coding protein_coding MGP_129S1SvImJ_T0070616.1 MGP_129S1SvImJ_G0029379.1 mouse_genomes_project 5 27685772 27696952 + MGP_129S1SvImJ_P0070616 Dnajb6 protein_coding protein_coding MGP_129S1SvImJ_T0070617.1 MGP_129S1SvImJ_G0029379.1 mouse_genomes_project 5 27703966 27705983 + Dnajb6 protein_coding retained_intron MGP_129S1SvImJ_T0070618.1 MGP_129S1SvImJ_G0029379.1 mouse_genomes_project 5 27707584 27711202 + Dnajb6 protein_coding processed_transcript MGP_129S1SvImJ_T0070619.1 MGP_129S1SvImJ_G0029379.1 mouse_genomes_project 5 27717432 27718877 + Dnajb6 protein_coding retained_intron MGP_129S1SvImJ_T0070620.1 MGP_129S1SvImJ_G0029379.1 mouse_genomes_project 5 27717726 27734190 + MGP_129S1SvImJ_P0070620 Dnajb6 protein_coding protein_coding MGP_129S1SvImJ_T0001763.1 MGP_129S1SvImJ_G0001678.1 mouse_genomes_project 5 106743405 106743774 - TEC TEC MGP_129S1SvImJ_T0008061.1 MGP_129S1SvImJ_G0006585.1 mouse_genomes_project 5 19983561 19987391 - Gm43657 lincRNA lincRNA MGP_129S1SvImJ_T0075253.1 MGP_129S1SvImJ_G0030241.1 mouse_genomes_project 5 142515832 142528472 - MGP_129S1SvImJ_P0075253 Nyap1 protein_coding protein_coding MGP_129S1SvImJ_T0075254.1 MGP_129S1SvImJ_G0030241.1 mouse_genomes_project 5 142516846 142530081 - MGP_129S1SvImJ_P0075254 Nyap1 protein_coding protein_coding MGP_129S1SvImJ_T0075255.1 MGP_129S1SvImJ_G0030241.1 mouse_genomes_project 5 142517615 142528192 - MGP_129S1SvImJ_P0075255 Nyap1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0075256.1 MGP_129S1SvImJ_G0030241.1 mouse_genomes_project 5 142518822 142529576 - MGP_129S1SvImJ_P0075256 Nyap1 protein_coding protein_coding MGP_129S1SvImJ_T0075682.1 MGP_129S1SvImJ_G0030331.1 mouse_genomes_project 5 148733616 148751690 + MGP_129S1SvImJ_P0075682 Kdelr2 protein_coding protein_coding MGP_129S1SvImJ_T0001720.1 MGP_129S1SvImJ_G0001635.1 mouse_genomes_project 5 75275085 75275536 - TEC TEC MGP_129S1SvImJ_T0072893.1 MGP_129S1SvImJ_G0029799.1 mouse_genomes_project 5 104525139 104826819 - MGP_129S1SvImJ_P0072893 Mapk10 protein_coding protein_coding MGP_129S1SvImJ_T0072894.1 MGP_129S1SvImJ_G0029799.1 mouse_genomes_project 5 104525141 104676769 - MGP_129S1SvImJ_P0072894 Mapk10 protein_coding protein_coding MGP_129S1SvImJ_T0072895.1 MGP_129S1SvImJ_G0029799.1 mouse_genomes_project 5 104525141 104826819 - MGP_129S1SvImJ_P0072895 Mapk10 protein_coding protein_coding MGP_129S1SvImJ_T0072896.1 MGP_129S1SvImJ_G0029799.1 mouse_genomes_project 5 104525141 104718359 - MGP_129S1SvImJ_P0072896 Mapk10 protein_coding protein_coding MGP_129S1SvImJ_T0072897.1 MGP_129S1SvImJ_G0029799.1 mouse_genomes_project 5 104530325 104821412 - MGP_129S1SvImJ_P0072897 Mapk10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072898.1 MGP_129S1SvImJ_G0029799.1 mouse_genomes_project 5 104537474 104826758 - MGP_129S1SvImJ_P0072898 Mapk10 protein_coding protein_coding MGP_129S1SvImJ_T0072899.1 MGP_129S1SvImJ_G0029799.1 mouse_genomes_project 5 104603999 104643352 - MGP_129S1SvImJ_P0072899 Mapk10 protein_coding protein_coding MGP_129S1SvImJ_T0072900.1 MGP_129S1SvImJ_G0029799.1 mouse_genomes_project 5 104604309 104826819 - MGP_129S1SvImJ_P0072900 Mapk10 protein_coding protein_coding MGP_129S1SvImJ_T0072901.1 MGP_129S1SvImJ_G0029799.1 mouse_genomes_project 5 104773737 104826769 - Mapk10 protein_coding processed_transcript MGP_129S1SvImJ_T0072902.1 MGP_129S1SvImJ_G0029799.1 mouse_genomes_project 5 104821305 104824495 - Mapk10 protein_coding processed_transcript MGP_129S1SvImJ_T0072903.1 MGP_129S1SvImJ_G0029799.1 mouse_genomes_project 5 104821309 104826819 - Mapk10 protein_coding processed_transcript MGP_129S1SvImJ_T0072904.1 MGP_129S1SvImJ_G0029799.1 mouse_genomes_project 5 104824433 104826356 - Mapk10 protein_coding processed_transcript MGP_129S1SvImJ_T0011624.1 MGP_129S1SvImJ_G0009740.1 mouse_genomes_project 5 113769119 113769230 - Gm27602 misc_RNA misc_RNA MGP_129S1SvImJ_T0001547.1 MGP_129S1SvImJ_G0001465.1 mouse_genomes_project 5 42418937 42421456 + TEC TEC MGP_129S1SvImJ_T0073420.1 MGP_129S1SvImJ_G0029915.1 mouse_genomes_project 5 115870945 115883094 + MGP_129S1SvImJ_P0073420 Tmem211 protein_coding protein_coding MGP_129S1SvImJ_T0073851.1 MGP_129S1SvImJ_G0029997.1 mouse_genomes_project 5 121752862 121920316 + Med13l protein_coding retained_intron MGP_129S1SvImJ_T0073852.1 MGP_129S1SvImJ_G0029997.1 mouse_genomes_project 5 121752902 121966872 + MGP_129S1SvImJ_P0073852 Med13l protein_coding protein_coding MGP_129S1SvImJ_T0073853.1 MGP_129S1SvImJ_G0029997.1 mouse_genomes_project 5 121752922 121965349 + MGP_129S1SvImJ_P0073853 Med13l protein_coding protein_coding MGP_129S1SvImJ_T0073854.1 MGP_129S1SvImJ_G0029997.1 mouse_genomes_project 5 121753776 121790831 + Med13l protein_coding processed_transcript MGP_129S1SvImJ_T0073855.1 MGP_129S1SvImJ_G0029997.1 mouse_genomes_project 5 121948783 121965349 + Med13l protein_coding retained_intron MGP_129S1SvImJ_T0073856.1 MGP_129S1SvImJ_G0029997.1 mouse_genomes_project 5 121951791 121965349 + Med13l protein_coding retained_intron MGP_129S1SvImJ_T0075518.1 MGP_129S1SvImJ_G0030296.1 mouse_genomes_project 5 145381605 145397591 + MGP_129S1SvImJ_P0075518 Nudt1 protein_coding protein_coding MGP_129S1SvImJ_T0075520.1 MGP_129S1SvImJ_G0030296.1 mouse_genomes_project 5 145391796 145398096 + MGP_129S1SvImJ_P0075520 Nudt1 protein_coding protein_coding MGP_129S1SvImJ_T0075521.1 MGP_129S1SvImJ_G0030296.1 mouse_genomes_project 5 145391845 145398096 + MGP_129S1SvImJ_P0075521 Nudt1 protein_coding protein_coding MGP_129S1SvImJ_T0075522.1 MGP_129S1SvImJ_G0030296.1 mouse_genomes_project 5 145391890 145397900 + MGP_129S1SvImJ_P0075522 Nudt1 protein_coding protein_coding MGP_129S1SvImJ_T0075523.1 MGP_129S1SvImJ_G0030296.1 mouse_genomes_project 5 145392331 145397767 + MGP_129S1SvImJ_P0075523 Nudt1 protein_coding protein_coding MGP_129S1SvImJ_T0075524.1 MGP_129S1SvImJ_G0030296.1 mouse_genomes_project 5 145392360 145395655 + MGP_129S1SvImJ_P0075524 Nudt1 protein_coding protein_coding MGP_129S1SvImJ_T0075525.1 MGP_129S1SvImJ_G0030296.1 mouse_genomes_project 5 145394532 145395771 + Nudt1 protein_coding processed_transcript MGP_129S1SvImJ_T0101721.1 MGP_129S1SvImJ_G0039725.1 mouse_genomes_project 5 72565835 72567013 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0011617.1 MGP_129S1SvImJ_G0009733.1 mouse_genomes_project 5 93132256 93132532 + Gm24113 misc_RNA misc_RNA MGP_129S1SvImJ_T0072861.1 MGP_129S1SvImJ_G0029793.1 mouse_genomes_project 5 102317355 102333066 - MGP_129S1SvImJ_P0072861 Fam175a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072862.1 MGP_129S1SvImJ_G0029793.1 mouse_genomes_project 5 102317355 102333091 - MGP_129S1SvImJ_P0072862 Fam175a protein_coding protein_coding MGP_129S1SvImJ_T0072863.1 MGP_129S1SvImJ_G0029793.1 mouse_genomes_project 5 102317355 102333069 - MGP_129S1SvImJ_P0072863 Fam175a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072864.1 MGP_129S1SvImJ_G0029793.1 mouse_genomes_project 5 102317355 102333066 - MGP_129S1SvImJ_P0072864 Fam175a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072865.1 MGP_129S1SvImJ_G0029793.1 mouse_genomes_project 5 102317366 102333066 - MGP_129S1SvImJ_P0072865 Fam175a protein_coding protein_coding MGP_129S1SvImJ_T0072866.1 MGP_129S1SvImJ_G0029793.1 mouse_genomes_project 5 102318488 102319478 - Fam175a protein_coding retained_intron MGP_129S1SvImJ_T0072867.1 MGP_129S1SvImJ_G0029793.1 mouse_genomes_project 5 102321928 102333067 - MGP_129S1SvImJ_P0072867 Fam175a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072868.1 MGP_129S1SvImJ_G0029793.1 mouse_genomes_project 5 102329883 102333073 - Fam175a protein_coding retained_intron MGP_129S1SvImJ_T0072869.1 MGP_129S1SvImJ_G0029793.1 mouse_genomes_project 5 102330485 102333066 - Fam175a protein_coding retained_intron MGP_129S1SvImJ_T0004682.1 MGP_129S1SvImJ_G0004058.1 mouse_genomes_project 5 32434095 32438918 + Gm42848 antisense antisense MGP_129S1SvImJ_T0011636.1 MGP_129S1SvImJ_G0009752.1 mouse_genomes_project 5 155067491 155067784 - Gm24105 misc_RNA misc_RNA MGP_129S1SvImJ_T0074389.1 MGP_129S1SvImJ_G0030089.1 mouse_genomes_project 5 127904293 127905247 + MGP_129S1SvImJ_P0074389 Arl6ip4 protein_coding protein_coding MGP_129S1SvImJ_T0074390.1 MGP_129S1SvImJ_G0030089.1 mouse_genomes_project 5 127904303 127906401 + MGP_129S1SvImJ_P0074390 Arl6ip4 protein_coding protein_coding MGP_129S1SvImJ_T0074391.1 MGP_129S1SvImJ_G0030089.1 mouse_genomes_project 5 127904326 127906301 + MGP_129S1SvImJ_P0074391 Arl6ip4 protein_coding protein_coding MGP_129S1SvImJ_T0074392.1 MGP_129S1SvImJ_G0030089.1 mouse_genomes_project 5 127904883 127906239 + MGP_129S1SvImJ_P0074392 Arl6ip4 protein_coding protein_coding MGP_129S1SvImJ_T0074393.1 MGP_129S1SvImJ_G0030089.1 mouse_genomes_project 5 127905515 127906396 + MGP_129S1SvImJ_P0074393 Arl6ip4 protein_coding protein_coding MGP_129S1SvImJ_T0070222.1 MGP_129S1SvImJ_G0029298.1 mouse_genomes_project 5 13266375 13729560 + MGP_129S1SvImJ_P0070222 Cacna2d1 protein_coding protein_coding MGP_129S1SvImJ_T0070223.1 MGP_129S1SvImJ_G0029298.1 mouse_genomes_project 5 13266472 13726120 + MGP_129S1SvImJ_P0070223 Cacna2d1 protein_coding protein_coding MGP_129S1SvImJ_T0070224.1 MGP_129S1SvImJ_G0029298.1 mouse_genomes_project 5 13266472 13726102 + MGP_129S1SvImJ_P0070224 Cacna2d1 protein_coding protein_coding MGP_129S1SvImJ_T0070225.1 MGP_129S1SvImJ_G0029298.1 mouse_genomes_project 5 13266472 13726120 + MGP_129S1SvImJ_P0070225 Cacna2d1 protein_coding protein_coding MGP_129S1SvImJ_T0070226.1 MGP_129S1SvImJ_G0029298.1 mouse_genomes_project 5 13266472 13729553 + MGP_129S1SvImJ_P0070226 Cacna2d1 protein_coding protein_coding MGP_129S1SvImJ_T0070227.1 MGP_129S1SvImJ_G0029298.1 mouse_genomes_project 5 13266472 13726120 + MGP_129S1SvImJ_P0070227 Cacna2d1 protein_coding protein_coding MGP_129S1SvImJ_T0070228.1 MGP_129S1SvImJ_G0029298.1 mouse_genomes_project 5 13266513 13725778 + MGP_129S1SvImJ_P0070228 Cacna2d1 protein_coding protein_coding MGP_129S1SvImJ_T0070229.1 MGP_129S1SvImJ_G0029298.1 mouse_genomes_project 5 13266595 13428089 + MGP_129S1SvImJ_P0070229 Cacna2d1 protein_coding protein_coding MGP_129S1SvImJ_T0070230.1 MGP_129S1SvImJ_G0029298.1 mouse_genomes_project 5 13362711 13624168 + Cacna2d1 protein_coding retained_intron MGP_129S1SvImJ_T0070231.1 MGP_129S1SvImJ_G0029298.1 mouse_genomes_project 5 13677912 13681584 + Cacna2d1 protein_coding retained_intron MGP_129S1SvImJ_T0070232.1 MGP_129S1SvImJ_G0029298.1 mouse_genomes_project 5 13678068 13693385 + Cacna2d1 protein_coding retained_intron MGP_129S1SvImJ_T0070233.1 MGP_129S1SvImJ_G0029298.1 mouse_genomes_project 5 13715446 13716378 + Cacna2d1 protein_coding retained_intron MGP_129S1SvImJ_T0071129.1 MGP_129S1SvImJ_G0029460.1 mouse_genomes_project 5 32382474 32383928 - Mxd4 protein_coding processed_transcript MGP_129S1SvImJ_T0071130.1 MGP_129S1SvImJ_G0029460.1 mouse_genomes_project 5 32382478 32397723 - MGP_129S1SvImJ_P0071130 Mxd4 protein_coding protein_coding MGP_129S1SvImJ_T0071131.1 MGP_129S1SvImJ_G0029460.1 mouse_genomes_project 5 32386591 32397733 - MGP_129S1SvImJ_P0071131 Mxd4 protein_coding protein_coding MGP_129S1SvImJ_T0071132.1 MGP_129S1SvImJ_G0029460.1 mouse_genomes_project 5 32389756 32394383 - Mxd4 protein_coding retained_intron MGP_129S1SvImJ_T0008261.1 MGP_129S1SvImJ_G0006731.1 mouse_genomes_project 5 108034576 108043039 + Gm32736 lincRNA lincRNA MGP_129S1SvImJ_T0001730.1 MGP_129S1SvImJ_G0001645.1 mouse_genomes_project 5 90540329 90542464 + TEC TEC MGP_129S1SvImJ_T0072947.1 MGP_129S1SvImJ_G0029813.1 mouse_genomes_project 5 106000130 106015746 + MGP_129S1SvImJ_P0072947 Mepe protein_coding protein_coding MGP_129S1SvImJ_T0070234.1 MGP_129S1SvImJ_G0029299.1 mouse_genomes_project 5 13922385 13944343 + Hgf protein_coding retained_intron MGP_129S1SvImJ_T0070235.1 MGP_129S1SvImJ_G0029299.1 mouse_genomes_project 5 13922465 13992507 + MGP_129S1SvImJ_P0070235 Hgf protein_coding unknown_likely_coding MGP_129S1SvImJ_T0070236.1 MGP_129S1SvImJ_G0029299.1 mouse_genomes_project 5 13922469 13939916 + Hgf protein_coding retained_intron MGP_129S1SvImJ_T0070237.1 MGP_129S1SvImJ_G0029299.1 mouse_genomes_project 5 13922665 13940489 + Hgf protein_coding retained_intron MGP_129S1SvImJ_T0070238.1 MGP_129S1SvImJ_G0029299.1 mouse_genomes_project 5 13922842 13992524 + MGP_129S1SvImJ_P0070238 Hgf protein_coding protein_coding MGP_129S1SvImJ_T0070601.1 MGP_129S1SvImJ_G0029375.1 mouse_genomes_project 5 27356688 27386403 + MGP_129S1SvImJ_P0070601 Nom1 protein_coding protein_coding MGP_129S1SvImJ_T0070602.1 MGP_129S1SvImJ_G0029375.1 mouse_genomes_project 5 27363375 27370318 + Nom1 protein_coding retained_intron MGP_129S1SvImJ_T0099904.1 MGP_129S1SvImJ_G0037971.1 mouse_genomes_project 5 20209675 20209740 - Gm24512 snRNA snRNA MGP_129S1SvImJ_T0073098.1 MGP_129S1SvImJ_G0029848.1 mouse_genomes_project 5 109967245 110044812 - MGP_129S1SvImJ_P0073098 Fam69a protein_coding protein_coding MGP_129S1SvImJ_T0073099.1 MGP_129S1SvImJ_G0029848.1 mouse_genomes_project 5 109968895 110044756 - MGP_129S1SvImJ_P0073099 Fam69a protein_coding protein_coding MGP_129S1SvImJ_T0073100.1 MGP_129S1SvImJ_G0029848.1 mouse_genomes_project 5 109973583 110027052 - MGP_129S1SvImJ_P0073100 Fam69a protein_coding protein_coding MGP_129S1SvImJ_T0015092.1 MGP_129S1SvImJ_G0013181.1 mouse_genomes_project 5 93552440 93554537 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001809.1 MGP_129S1SvImJ_G0001724.1 mouse_genomes_project 5 121753958 121755302 - TEC TEC MGP_129S1SvImJ_T0102587.1 MGP_129S1SvImJ_G0040420.1 mouse_genomes_project 5 154194837 154195145 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0014952.1 MGP_129S1SvImJ_G0013041.1 mouse_genomes_project 5 30511571 30513473 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072948.1 MGP_129S1SvImJ_G0029814.1 mouse_genomes_project 5 106110129 106116062 + MGP_129S1SvImJ_P0072948 Spp1 protein_coding protein_coding MGP_129S1SvImJ_T0072949.1 MGP_129S1SvImJ_G0029814.1 mouse_genomes_project 5 106110129 106116060 + MGP_129S1SvImJ_P0072949 Spp1 protein_coding protein_coding MGP_129S1SvImJ_T0072950.1 MGP_129S1SvImJ_G0029814.1 mouse_genomes_project 5 106110132 106116059 + MGP_129S1SvImJ_P0072950 Spp1 protein_coding protein_coding MGP_129S1SvImJ_T0072951.1 MGP_129S1SvImJ_G0029814.1 mouse_genomes_project 5 106110150 106114554 + MGP_129S1SvImJ_P0072951 Spp1 protein_coding protein_coding MGP_129S1SvImJ_T0072952.1 MGP_129S1SvImJ_G0029814.1 mouse_genomes_project 5 106110153 106114516 + MGP_129S1SvImJ_P0072952 Spp1 protein_coding protein_coding MGP_129S1SvImJ_T0072953.1 MGP_129S1SvImJ_G0029814.1 mouse_genomes_project 5 106110169 106112722 + MGP_129S1SvImJ_P0072953 Spp1 protein_coding protein_coding MGP_129S1SvImJ_T0072954.1 MGP_129S1SvImJ_G0029814.1 mouse_genomes_project 5 106111203 106116055 + MGP_129S1SvImJ_P0072954 Spp1 protein_coding protein_coding MGP_129S1SvImJ_T0073703.1 MGP_129S1SvImJ_G0029972.1 mouse_genomes_project 5 118403194 118454257 + MGP_129S1SvImJ_P0073703 Pxn protein_coding protein_coding MGP_129S1SvImJ_T0073704.1 MGP_129S1SvImJ_G0029972.1 mouse_genomes_project 5 118403229 118454252 + Pxn protein_coding retained_intron MGP_129S1SvImJ_T0073705.1 MGP_129S1SvImJ_G0029972.1 mouse_genomes_project 5 118403326 118453247 + MGP_129S1SvImJ_P0073705 Pxn protein_coding protein_coding MGP_129S1SvImJ_T0073706.1 MGP_129S1SvImJ_G0029972.1 mouse_genomes_project 5 118403374 118447418 + MGP_129S1SvImJ_P0073706 Pxn protein_coding unknown_likely_coding MGP_129S1SvImJ_T0073707.1 MGP_129S1SvImJ_G0029972.1 mouse_genomes_project 5 118412887 118443158 + Pxn protein_coding processed_transcript MGP_129S1SvImJ_T0073708.1 MGP_129S1SvImJ_G0029972.1 mouse_genomes_project 5 118416819 118454252 + Pxn protein_coding processed_transcript MGP_129S1SvImJ_T0073709.1 MGP_129S1SvImJ_G0029972.1 mouse_genomes_project 5 118441203 118445159 + MGP_129S1SvImJ_P0073709 Pxn protein_coding protein_coding MGP_129S1SvImJ_T0073710.1 MGP_129S1SvImJ_G0029972.1 mouse_genomes_project 5 118441239 118445114 + MGP_129S1SvImJ_P0073710 Pxn protein_coding protein_coding MGP_129S1SvImJ_T0073711.1 MGP_129S1SvImJ_G0029972.1 mouse_genomes_project 5 118442221 118443687 + Pxn protein_coding processed_transcript MGP_129S1SvImJ_T0073712.1 MGP_129S1SvImJ_G0029972.1 mouse_genomes_project 5 118442359 118452770 + MGP_129S1SvImJ_P0073712 Pxn protein_coding protein_coding MGP_129S1SvImJ_T0073713.1 MGP_129S1SvImJ_G0029972.1 mouse_genomes_project 5 118442388 118443223 + Pxn protein_coding retained_intron MGP_129S1SvImJ_T0073714.1 MGP_129S1SvImJ_G0029972.1 mouse_genomes_project 5 118443070 118448035 + Pxn protein_coding retained_intron MGP_129S1SvImJ_T0073715.1 MGP_129S1SvImJ_G0029972.1 mouse_genomes_project 5 118443578 118444050 + Pxn protein_coding retained_intron MGP_129S1SvImJ_T0073716.1 MGP_129S1SvImJ_G0029972.1 mouse_genomes_project 5 118448447 118454257 + MGP_129S1SvImJ_P0073716 Pxn protein_coding unknown_likely_coding MGP_129S1SvImJ_T0073717.1 MGP_129S1SvImJ_G0029972.1 mouse_genomes_project 5 118450199 118451053 + Pxn protein_coding retained_intron MGP_129S1SvImJ_T0099966.1 MGP_129S1SvImJ_G0038033.1 mouse_genomes_project 5 127369559 127369706 + Gm24840 snRNA snRNA MGP_129S1SvImJ_T0001569.1 MGP_129S1SvImJ_G0001487.1 mouse_genomes_project 5 44573445 44574568 + TEC TEC MGP_129S1SvImJ_T0072583.1 MGP_129S1SvImJ_G0029735.1 mouse_genomes_project 5 92154663 92172833 + MGP_129S1SvImJ_P0072583 Ereg protein_coding protein_coding MGP_129S1SvImJ_T0099953.1 MGP_129S1SvImJ_G0038020.1 mouse_genomes_project 5 108637533 108637655 + Gm24191 snRNA snRNA MGP_129S1SvImJ_T0004704.1 MGP_129S1SvImJ_G0004075.1 mouse_genomes_project 5 43301150 43321192 + Gm43507 antisense antisense MGP_129S1SvImJ_T0004705.1 MGP_129S1SvImJ_G0004075.1 mouse_genomes_project 5 43312263 43322603 + Gm43507 antisense antisense MGP_129S1SvImJ_T0099944.1 MGP_129S1SvImJ_G0038011.1 mouse_genomes_project 5 94225430 94225538 - Gm25521 snRNA snRNA MGP_129S1SvImJ_T0073123.1 MGP_129S1SvImJ_G0029851.1 mouse_genomes_project 5 110200908 110235095 + MGP_129S1SvImJ_P0073123 Ccdc18 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073124.1 MGP_129S1SvImJ_G0029851.1 mouse_genomes_project 5 110200947 110319280 + MGP_129S1SvImJ_P0073124 Ccdc18 protein_coding protein_coding MGP_129S1SvImJ_T0073125.1 MGP_129S1SvImJ_G0029851.1 mouse_genomes_project 5 110200979 110207413 + Ccdc18 protein_coding retained_intron MGP_129S1SvImJ_T0073126.1 MGP_129S1SvImJ_G0029851.1 mouse_genomes_project 5 110203242 110317747 + MGP_129S1SvImJ_P0073126 Ccdc18 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0073127.1 MGP_129S1SvImJ_G0029851.1 mouse_genomes_project 5 110236801 110250809 + Ccdc18 protein_coding processed_transcript MGP_129S1SvImJ_T0072710.1 MGP_129S1SvImJ_G0029761.1 mouse_genomes_project 5 94490905 94499867 + MGP_129S1SvImJ_P0072710 Ccng2 protein_coding protein_coding MGP_129S1SvImJ_T0072711.1 MGP_129S1SvImJ_G0029761.1 mouse_genomes_project 5 94491237 94492105 + Ccng2 protein_coding processed_transcript MGP_129S1SvImJ_T0072712.1 MGP_129S1SvImJ_G0029761.1 mouse_genomes_project 5 94491249 94493366 + Ccng2 protein_coding processed_transcript MGP_129S1SvImJ_T0072713.1 MGP_129S1SvImJ_G0029761.1 mouse_genomes_project 5 94491287 94499861 + Ccng2 protein_coding retained_intron MGP_129S1SvImJ_T0072714.1 MGP_129S1SvImJ_G0029761.1 mouse_genomes_project 5 94491962 94499860 + MGP_129S1SvImJ_P0072714 Ccng2 protein_coding protein_coding MGP_129S1SvImJ_T0072715.1 MGP_129S1SvImJ_G0029761.1 mouse_genomes_project 5 94492357 94497127 + Ccng2 protein_coding retained_intron MGP_129S1SvImJ_T0069949.1 MGP_129S1SvImJ_G0029255.1 mouse_genomes_project 5 182885 327970 + MGP_129S1SvImJ_P0069949 Cdk6 protein_coding protein_coding MGP_129S1SvImJ_T0069950.1 MGP_129S1SvImJ_G0029255.1 mouse_genomes_project 5 182885 336759 + MGP_129S1SvImJ_P0069950 Cdk6 protein_coding protein_coding MGP_129S1SvImJ_T0069951.1 MGP_129S1SvImJ_G0029255.1 mouse_genomes_project 5 275863 278095 + Cdk6 protein_coding retained_intron MGP_129S1SvImJ_T0015096.1 MGP_129S1SvImJ_G0013185.1 mouse_genomes_project 5 99392112 99392422 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070483.1 MGP_129S1SvImJ_G0029349.1 mouse_genomes_project 5 22284932 22297011 - MGP_129S1SvImJ_P0070483 4931409K22Rik protein_coding protein_coding MGP_129S1SvImJ_T0070484.1 MGP_129S1SvImJ_G0029349.1 mouse_genomes_project 5 22284932 22297011 - MGP_129S1SvImJ_P0070484 4931409K22Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070485.1 MGP_129S1SvImJ_G0029349.1 mouse_genomes_project 5 22284948 22294235 - 4931409K22Rik protein_coding retained_intron MGP_129S1SvImJ_T0070486.1 MGP_129S1SvImJ_G0029349.1 mouse_genomes_project 5 22294236 22297070 - MGP_129S1SvImJ_P0070486 4931409K22Rik protein_coding protein_coding MGP_129S1SvImJ_T0070487.1 MGP_129S1SvImJ_G0029349.1 mouse_genomes_project 5 22294245 22298414 - 4931409K22Rik protein_coding processed_transcript MGP_129S1SvImJ_T0008219.1 MGP_129S1SvImJ_G0006703.1 mouse_genomes_project 5 98187272 98204838 + Gm8013 lincRNA lincRNA MGP_129S1SvImJ_T0098980.1 MGP_129S1SvImJ_G0037054.1 mouse_genomes_project 5 156504839 156508885 + Gm42531 sense_intronic sense_intronic MGP_129S1SvImJ_T0011626.1 MGP_129S1SvImJ_G0009742.1 mouse_genomes_project 5 114784311 114784672 - Gm27998 misc_RNA misc_RNA MGP_129S1SvImJ_T0018199.1 MGP_129S1SvImJ_G0015605.1 mouse_genomes_project 5 74154587 74155848 + Dancr processed_transcript lincRNA MGP_129S1SvImJ_T0018200.1 MGP_129S1SvImJ_G0015605.1 mouse_genomes_project 5 74154593 74155847 + Dancr processed_transcript retained_intron MGP_129S1SvImJ_T0071115.1 MGP_129S1SvImJ_G0029458.1 mouse_genomes_project 5 32209723 32216107 - Poln protein_coding processed_transcript MGP_129S1SvImJ_T0071116.1 MGP_129S1SvImJ_G0029458.1 mouse_genomes_project 5 32209733 32252414 - Poln protein_coding processed_transcript MGP_129S1SvImJ_T0071117.1 MGP_129S1SvImJ_G0029458.1 mouse_genomes_project 5 32209742 32378040 - MGP_129S1SvImJ_P0071117 Poln protein_coding protein_coding MGP_129S1SvImJ_T0071118.1 MGP_129S1SvImJ_G0029458.1 mouse_genomes_project 5 32209742 32378040 - MGP_129S1SvImJ_P0071118 Poln protein_coding protein_coding MGP_129S1SvImJ_T0071119.1 MGP_129S1SvImJ_G0029458.1 mouse_genomes_project 5 32209827 32378018 - MGP_129S1SvImJ_P0071119 Poln protein_coding protein_coding MGP_129S1SvImJ_T0071120.1 MGP_129S1SvImJ_G0029458.1 mouse_genomes_project 5 32216897 32309934 - Poln protein_coding processed_transcript MGP_129S1SvImJ_T0071121.1 MGP_129S1SvImJ_G0029458.1 mouse_genomes_project 5 32236410 32309874 - Poln protein_coding processed_transcript MGP_129S1SvImJ_T0071122.1 MGP_129S1SvImJ_G0029458.1 mouse_genomes_project 5 32305829 32309950 - Poln protein_coding retained_intron MGP_129S1SvImJ_T0098597.1 MGP_129S1SvImJ_G0036682.1 mouse_genomes_project 5 20007159 20007272 - n-R5s170 rRNA rRNA MGP_129S1SvImJ_T0008262.1 MGP_129S1SvImJ_G0006732.1 mouse_genomes_project 5 108271271 108273139 + Gm32921 lincRNA lincRNA MGP_129S1SvImJ_T0075476.1 MGP_129S1SvImJ_G0030285.1 mouse_genomes_project 5 144401105 144405755 + MGP_129S1SvImJ_P0075476 Gper1 protein_coding protein_coding MGP_129S1SvImJ_T0075477.1 MGP_129S1SvImJ_G0030285.1 mouse_genomes_project 5 144401234 144403844 + Gper1 protein_coding processed_transcript MGP_129S1SvImJ_T0015191.1 MGP_129S1SvImJ_G0013280.1 mouse_genomes_project 5 142040962 142041209 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070530.1 MGP_129S1SvImJ_G0029360.1 mouse_genomes_project 5 23008006 23008312 - MGP_129S1SvImJ_P0070530 E130116L18Rik protein_coding protein_coding MGP_129S1SvImJ_T0008120.1 MGP_129S1SvImJ_G0006620.1 mouse_genomes_project 5 37758401 37764539 + Gm43454 lincRNA lincRNA MGP_129S1SvImJ_T0001522.1 MGP_129S1SvImJ_G0001440.1 mouse_genomes_project 5 30936757 30937795 - TEC TEC MGP_129S1SvImJ_T0071172.1 MGP_129S1SvImJ_G0029467.1 mouse_genomes_project 5 32819707 32879354 + MGP_129S1SvImJ_P0071172 Add1 protein_coding protein_coding MGP_129S1SvImJ_T0071173.1 MGP_129S1SvImJ_G0029467.1 mouse_genomes_project 5 32819808 32852938 + MGP_129S1SvImJ_P0071173 Add1 protein_coding protein_coding MGP_129S1SvImJ_T0071174.1 MGP_129S1SvImJ_G0029467.1 mouse_genomes_project 5 32819812 32852938 + MGP_129S1SvImJ_P0071174 Add1 protein_coding protein_coding MGP_129S1SvImJ_T0071175.1 MGP_129S1SvImJ_G0029467.1 mouse_genomes_project 5 32819847 32848670 + Add1 protein_coding processed_transcript MGP_129S1SvImJ_T0071176.1 MGP_129S1SvImJ_G0029467.1 mouse_genomes_project 5 32819906 32879351 + MGP_129S1SvImJ_P0071176 Add1 protein_coding protein_coding MGP_129S1SvImJ_T0071177.1 MGP_129S1SvImJ_G0029467.1 mouse_genomes_project 5 32819916 32879354 + MGP_129S1SvImJ_P0071177 Add1 protein_coding protein_coding MGP_129S1SvImJ_T0071178.1 MGP_129S1SvImJ_G0029467.1 mouse_genomes_project 5 32820085 32879340 + MGP_129S1SvImJ_P0071178 Add1 protein_coding protein_coding MGP_129S1SvImJ_T0071179.1 MGP_129S1SvImJ_G0029467.1 mouse_genomes_project 5 32843384 32846158 + Add1 protein_coding retained_intron MGP_129S1SvImJ_T0071180.1 MGP_129S1SvImJ_G0029467.1 mouse_genomes_project 5 32848386 32877862 + MGP_129S1SvImJ_P0071180 Add1 protein_coding protein_coding MGP_129S1SvImJ_T0071181.1 MGP_129S1SvImJ_G0029467.1 mouse_genomes_project 5 32861293 32872365 + MGP_129S1SvImJ_P0071181 Add1 protein_coding protein_coding MGP_129S1SvImJ_T0071182.1 MGP_129S1SvImJ_G0029467.1 mouse_genomes_project 5 32863671 32867497 + Add1 protein_coding retained_intron MGP_129S1SvImJ_T0071183.1 MGP_129S1SvImJ_G0029467.1 mouse_genomes_project 5 32863812 32877677 + MGP_129S1SvImJ_P0071183 Add1 protein_coding protein_coding MGP_129S1SvImJ_T0071184.1 MGP_129S1SvImJ_G0029467.1 mouse_genomes_project 5 32866399 32879354 + MGP_129S1SvImJ_P0071184 Add1 protein_coding protein_coding MGP_129S1SvImJ_T0071185.1 MGP_129S1SvImJ_G0029467.1 mouse_genomes_project 5 32866894 32877787 + Add1 protein_coding retained_intron MGP_129S1SvImJ_T0071186.1 MGP_129S1SvImJ_G0029467.1 mouse_genomes_project 5 32867016 32875789 + Add1 protein_coding retained_intron MGP_129S1SvImJ_T0001835.1 MGP_129S1SvImJ_G0001750.1 mouse_genomes_project 5 126582892 126584474 - TEC TEC MGP_129S1SvImJ_T0075138.1 MGP_129S1SvImJ_G0030222.1 mouse_genomes_project 5 142027248 142039241 - MGP_129S1SvImJ_P0075138 Srrt protein_coding protein_coding MGP_129S1SvImJ_T0075139.1 MGP_129S1SvImJ_G0030222.1 mouse_genomes_project 5 142027255 142039233 - MGP_129S1SvImJ_P0075139 Srrt protein_coding protein_coding MGP_129S1SvImJ_T0075140.1 MGP_129S1SvImJ_G0030222.1 mouse_genomes_project 5 142027259 142039233 - MGP_129S1SvImJ_P0075140 Srrt protein_coding protein_coding MGP_129S1SvImJ_T0075141.1 MGP_129S1SvImJ_G0030222.1 mouse_genomes_project 5 142027261 142038980 - MGP_129S1SvImJ_P0075141 Srrt protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075142.1 MGP_129S1SvImJ_G0030222.1 mouse_genomes_project 5 142027269 142031190 - MGP_129S1SvImJ_P0075142 Srrt protein_coding protein_coding MGP_129S1SvImJ_T0075143.1 MGP_129S1SvImJ_G0030222.1 mouse_genomes_project 5 142027531 142028970 - MGP_129S1SvImJ_P0075143 Srrt protein_coding protein_coding MGP_129S1SvImJ_T0075144.1 MGP_129S1SvImJ_G0030222.1 mouse_genomes_project 5 142027562 142028479 - Srrt protein_coding retained_intron MGP_129S1SvImJ_T0075145.1 MGP_129S1SvImJ_G0030222.1 mouse_genomes_project 5 142027780 142028762 - Srrt protein_coding retained_intron MGP_129S1SvImJ_T0075146.1 MGP_129S1SvImJ_G0030222.1 mouse_genomes_project 5 142027823 142028398 - Srrt protein_coding retained_intron MGP_129S1SvImJ_T0075147.1 MGP_129S1SvImJ_G0030222.1 mouse_genomes_project 5 142028011 142029112 - Srrt protein_coding retained_intron MGP_129S1SvImJ_T0075148.1 MGP_129S1SvImJ_G0030222.1 mouse_genomes_project 5 142029168 142030092 - Srrt protein_coding retained_intron MGP_129S1SvImJ_T0075149.1 MGP_129S1SvImJ_G0030222.1 mouse_genomes_project 5 142029376 142031863 - MGP_129S1SvImJ_P0075149 Srrt protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075150.1 MGP_129S1SvImJ_G0030222.1 mouse_genomes_project 5 142029376 142031554 - MGP_129S1SvImJ_P0075150 Srrt protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075151.1 MGP_129S1SvImJ_G0030222.1 mouse_genomes_project 5 142029803 142031431 - Srrt protein_coding retained_intron MGP_129S1SvImJ_T0075152.1 MGP_129S1SvImJ_G0030222.1 mouse_genomes_project 5 142031130 142039032 - Srrt protein_coding retained_intron MGP_129S1SvImJ_T0075153.1 MGP_129S1SvImJ_G0030222.1 mouse_genomes_project 5 142031417 142032276 - Srrt protein_coding retained_intron MGP_129S1SvImJ_T0075154.1 MGP_129S1SvImJ_G0030222.1 mouse_genomes_project 5 142034198 142039207 - MGP_129S1SvImJ_P0075154 Srrt protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0015079.1 MGP_129S1SvImJ_G0013168.1 mouse_genomes_project 5 89184030 89184385 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004850.1 MGP_129S1SvImJ_G0004179.1 mouse_genomes_project 5 127983705 127984626 + Pitpnm2os2 antisense antisense MGP_129S1SvImJ_T0004851.1 MGP_129S1SvImJ_G0004179.1 mouse_genomes_project 5 127983758 127989148 + Pitpnm2os2 antisense antisense MGP_129S1SvImJ_T0004852.1 MGP_129S1SvImJ_G0004179.1 mouse_genomes_project 5 127984440 127986909 + Pitpnm2os2 antisense antisense MGP_129S1SvImJ_T0074312.1 MGP_129S1SvImJ_G0030077.1 mouse_genomes_project 5 127452428 127477738 - MGP_129S1SvImJ_P0074312 Zcchc8 protein_coding protein_coding MGP_129S1SvImJ_T0074313.1 MGP_129S1SvImJ_G0030077.1 mouse_genomes_project 5 127452436 127477682 - MGP_129S1SvImJ_P0074313 Zcchc8 protein_coding protein_coding MGP_129S1SvImJ_T0074314.1 MGP_129S1SvImJ_G0030077.1 mouse_genomes_project 5 127453932 127457552 - Zcchc8 protein_coding retained_intron MGP_129S1SvImJ_T0074315.1 MGP_129S1SvImJ_G0030077.1 mouse_genomes_project 5 127459396 127476146 - MGP_129S1SvImJ_P0074315 Zcchc8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074316.1 MGP_129S1SvImJ_G0030077.1 mouse_genomes_project 5 127459413 127464074 - Zcchc8 protein_coding retained_intron MGP_129S1SvImJ_T0074317.1 MGP_129S1SvImJ_G0030077.1 mouse_genomes_project 5 127463879 127470565 - MGP_129S1SvImJ_P0074317 Zcchc8 protein_coding protein_coding MGP_129S1SvImJ_T0074318.1 MGP_129S1SvImJ_G0030077.1 mouse_genomes_project 5 127464786 127477461 - MGP_129S1SvImJ_P0074318 Zcchc8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074319.1 MGP_129S1SvImJ_G0030077.1 mouse_genomes_project 5 127466327 127477500 - MGP_129S1SvImJ_P0074319 Zcchc8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074320.1 MGP_129S1SvImJ_G0030077.1 mouse_genomes_project 5 127470573 127477412 - MGP_129S1SvImJ_P0074320 Zcchc8 protein_coding protein_coding MGP_129S1SvImJ_T0075126.1 MGP_129S1SvImJ_G0030219.1 mouse_genomes_project 5 141973258 141976856 - MGP_129S1SvImJ_P0075126 protein_coding protein_coding MGP_129S1SvImJ_T0075127.1 MGP_129S1SvImJ_G0030219.1 mouse_genomes_project 5 141974485 141982867 - MGP_129S1SvImJ_P0075127 protein_coding protein_coding MGP_129S1SvImJ_T0073731.1 MGP_129S1SvImJ_G0029975.1 mouse_genomes_project 5 118533994 118553824 + MGP_129S1SvImJ_P0073731 Rab35 protein_coding protein_coding MGP_129S1SvImJ_T0073732.1 MGP_129S1SvImJ_G0029975.1 mouse_genomes_project 5 118545774 118554182 + MGP_129S1SvImJ_P0073732 Rab35 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071047.1 MGP_129S1SvImJ_G0029448.1 mouse_genomes_project 5 31812892 31815060 + MGP_129S1SvImJ_P0071047 Gm9903 protein_coding protein_coding MGP_129S1SvImJ_T0074968.1 MGP_129S1SvImJ_G0030190.1 mouse_genomes_project 5 140363165 140375077 + MGP_129S1SvImJ_P0074968 Mdh2 protein_coding protein_coding MGP_129S1SvImJ_T0074969.1 MGP_129S1SvImJ_G0030190.1 mouse_genomes_project 5 140363321 140364927 + Mdh2 protein_coding retained_intron MGP_129S1SvImJ_T0074970.1 MGP_129S1SvImJ_G0030190.1 mouse_genomes_project 5 140363347 140375084 + MGP_129S1SvImJ_P0074970 Mdh2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074971.1 MGP_129S1SvImJ_G0030190.1 mouse_genomes_project 5 140363362 140369300 + Mdh2 protein_coding retained_intron MGP_129S1SvImJ_T0074972.1 MGP_129S1SvImJ_G0030190.1 mouse_genomes_project 5 140363370 140372337 + MGP_129S1SvImJ_P0074972 Mdh2 protein_coding protein_coding MGP_129S1SvImJ_T0074973.1 MGP_129S1SvImJ_G0030190.1 mouse_genomes_project 5 140363374 140371032 + MGP_129S1SvImJ_P0074973 Mdh2 protein_coding protein_coding MGP_129S1SvImJ_T0074974.1 MGP_129S1SvImJ_G0030190.1 mouse_genomes_project 5 140363407 140368438 + Mdh2 protein_coding retained_intron MGP_129S1SvImJ_T0072517.1 MGP_129S1SvImJ_G0029717.1 mouse_genomes_project 5 90696634 90918525 - MGP_129S1SvImJ_P0072517 Adamts3 protein_coding protein_coding MGP_129S1SvImJ_T0072518.1 MGP_129S1SvImJ_G0029717.1 mouse_genomes_project 5 90696634 90918525 - MGP_129S1SvImJ_P0072518 Adamts3 protein_coding protein_coding MGP_129S1SvImJ_T0072519.1 MGP_129S1SvImJ_G0029717.1 mouse_genomes_project 5 90864437 90918924 - MGP_129S1SvImJ_P0072519 Adamts3 protein_coding protein_coding MGP_129S1SvImJ_T0072520.1 MGP_129S1SvImJ_G0029717.1 mouse_genomes_project 5 90895766 90917737 - Adamts3 protein_coding processed_transcript MGP_129S1SvImJ_T0001632.1 MGP_129S1SvImJ_G0001549.1 mouse_genomes_project 5 57252058 57253929 + TEC TEC MGP_129S1SvImJ_T0015128.1 MGP_129S1SvImJ_G0013217.1 mouse_genomes_project 5 109410821 109411458 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001783.1 MGP_129S1SvImJ_G0001698.1 mouse_genomes_project 5 114949443 114949810 - TEC TEC MGP_129S1SvImJ_T0072958.1 MGP_129S1SvImJ_G0029816.1 mouse_genomes_project 5 106188206 106202476 + MGP_129S1SvImJ_P0072958 BC005561 protein_coding protein_coding MGP_129S1SvImJ_T0072928.1 MGP_129S1SvImJ_G0029805.1 mouse_genomes_project 5 105618373 105643575 - MGP_129S1SvImJ_P0072928 Hsd17b13 protein_coding protein_coding MGP_129S1SvImJ_T0072929.1 MGP_129S1SvImJ_G0029805.1 mouse_genomes_project 5 105627364 105643537 - MGP_129S1SvImJ_P0072929 Hsd17b13 protein_coding protein_coding MGP_129S1SvImJ_T0072930.1 MGP_129S1SvImJ_G0029805.1 mouse_genomes_project 5 105627364 105643621 - MGP_129S1SvImJ_P0072930 Hsd17b13 protein_coding protein_coding MGP_129S1SvImJ_T0001573.1 MGP_129S1SvImJ_G0001491.1 mouse_genomes_project 5 46916192 46917805 + TEC TEC MGP_129S1SvImJ_T0004648.1 MGP_129S1SvImJ_G0004029.1 mouse_genomes_project 5 444008 445954 - 4833413G10Rik antisense antisense MGP_129S1SvImJ_T0073253.1 MGP_129S1SvImJ_G0029883.1 mouse_genomes_project 5 112703490 112713471 - MGP_129S1SvImJ_P0073253 Pgam5 protein_coding protein_coding MGP_129S1SvImJ_T0073254.1 MGP_129S1SvImJ_G0029883.1 mouse_genomes_project 5 112703516 112713445 - MGP_129S1SvImJ_P0073254 Pgam5 protein_coding protein_coding MGP_129S1SvImJ_T0073255.1 MGP_129S1SvImJ_G0029883.1 mouse_genomes_project 5 112708809 112709609 - Pgam5 protein_coding retained_intron MGP_129S1SvImJ_T0073256.1 MGP_129S1SvImJ_G0029883.1 mouse_genomes_project 5 112709155 112713412 - MGP_129S1SvImJ_P0073256 Pgam5 protein_coding protein_coding MGP_129S1SvImJ_T0073604.1 MGP_129S1SvImJ_G0029951.1 mouse_genomes_project 5 117696395 117713341 + MGP_129S1SvImJ_P0073604 Oasl2 protein_coding protein_coding MGP_129S1SvImJ_T0073605.1 MGP_129S1SvImJ_G0029951.1 mouse_genomes_project 5 117696460 117699639 + MGP_129S1SvImJ_P0073605 Oasl2 protein_coding protein_coding MGP_129S1SvImJ_T0073606.1 MGP_129S1SvImJ_G0029951.1 mouse_genomes_project 5 117696489 117699423 + MGP_129S1SvImJ_P0073606 Oasl2 protein_coding protein_coding MGP_129S1SvImJ_T0073607.1 MGP_129S1SvImJ_G0029951.1 mouse_genomes_project 5 117696991 117697810 + Oasl2 protein_coding retained_intron MGP_129S1SvImJ_T0073608.1 MGP_129S1SvImJ_G0029951.1 mouse_genomes_project 5 117697035 117699728 + Oasl2 protein_coding retained_intron MGP_129S1SvImJ_T0073609.1 MGP_129S1SvImJ_G0029951.1 mouse_genomes_project 5 117697201 117713333 + MGP_129S1SvImJ_P0073609 Oasl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073610.1 MGP_129S1SvImJ_G0029951.1 mouse_genomes_project 5 117700805 117712327 + MGP_129S1SvImJ_P0073610 Oasl2 protein_coding protein_coding MGP_129S1SvImJ_T0073611.1 MGP_129S1SvImJ_G0029951.1 mouse_genomes_project 5 117701294 117703841 + Oasl2 protein_coding retained_intron MGP_129S1SvImJ_T0073612.1 MGP_129S1SvImJ_G0029951.1 mouse_genomes_project 5 117704332 117706627 + Oasl2 protein_coding retained_intron MGP_129S1SvImJ_T0101200.1 MGP_129S1SvImJ_G0039267.1 mouse_genomes_project 5 84404891 84405019 - Gm24792 snoRNA snoRNA MGP_129S1SvImJ_T0075504.1 MGP_129S1SvImJ_G0030292.1 mouse_genomes_project 5 144825926 144846010 - MGP_129S1SvImJ_P0075504 Gm26938 protein_coding protein_coding MGP_129S1SvImJ_T0073876.1 MGP_129S1SvImJ_G0030001.1 mouse_genomes_project 5 123785481 123794946 + MGP_129S1SvImJ_P0073876 Lhx5 protein_coding protein_coding MGP_129S1SvImJ_T0070855.1 MGP_129S1SvImJ_G0029418.1 mouse_genomes_project 5 29191228 29211220 - MGP_129S1SvImJ_P0070855 Ppm1g protein_coding protein_coding MGP_129S1SvImJ_T0070856.1 MGP_129S1SvImJ_G0029418.1 mouse_genomes_project 5 29191232 29211342 - MGP_129S1SvImJ_P0070856 Ppm1g protein_coding protein_coding MGP_129S1SvImJ_T0070857.1 MGP_129S1SvImJ_G0029418.1 mouse_genomes_project 5 29191666 29193648 - Ppm1g protein_coding retained_intron MGP_129S1SvImJ_T0070859.1 MGP_129S1SvImJ_G0029418.1 mouse_genomes_project 5 29193656 29196230 - MGP_129S1SvImJ_P0070859 Ppm1g protein_coding protein_coding MGP_129S1SvImJ_T0070860.1 MGP_129S1SvImJ_G0029418.1 mouse_genomes_project 5 29209434 29211220 - Ppm1g protein_coding retained_intron MGP_129S1SvImJ_T0075386.1 MGP_129S1SvImJ_G0030270.1 mouse_genomes_project 5 143517638 143533461 - MGP_129S1SvImJ_P0075386 Zfp68 protein_coding protein_coding MGP_129S1SvImJ_T0075387.1 MGP_129S1SvImJ_G0030270.1 mouse_genomes_project 5 143518986 143533458 - MGP_129S1SvImJ_P0075387 Zfp68 protein_coding protein_coding MGP_129S1SvImJ_T0075388.1 MGP_129S1SvImJ_G0030270.1 mouse_genomes_project 5 143520120 143521062 - Zfp68 protein_coding processed_transcript MGP_129S1SvImJ_T0075389.1 MGP_129S1SvImJ_G0030270.1 mouse_genomes_project 5 143520124 143533440 - MGP_129S1SvImJ_P0075389 Zfp68 protein_coding protein_coding MGP_129S1SvImJ_T0075390.1 MGP_129S1SvImJ_G0030270.1 mouse_genomes_project 5 143525760 143533353 - MGP_129S1SvImJ_P0075390 Zfp68 protein_coding protein_coding MGP_129S1SvImJ_T0075391.1 MGP_129S1SvImJ_G0030270.1 mouse_genomes_project 5 143529878 143533438 - Zfp68 protein_coding retained_intron MGP_129S1SvImJ_T0098607.1 MGP_129S1SvImJ_G0036692.1 mouse_genomes_project 5 109431533 109432312 + n-R5s173 rRNA rRNA MGP_129S1SvImJ_T0014897.1 MGP_129S1SvImJ_G0012986.1 mouse_genomes_project 5 18090502 18090808 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070480.1 MGP_129S1SvImJ_G0029348.1 mouse_genomes_project 5 22274133 22281976 - MGP_129S1SvImJ_P0070480 Asb10 protein_coding protein_coding MGP_129S1SvImJ_T0070481.1 MGP_129S1SvImJ_G0029348.1 mouse_genomes_project 5 22275101 22282497 - MGP_129S1SvImJ_P0070481 Asb10 protein_coding protein_coding MGP_129S1SvImJ_T0070482.1 MGP_129S1SvImJ_G0029348.1 mouse_genomes_project 5 22275119 22282111 - MGP_129S1SvImJ_P0070482 Asb10 protein_coding protein_coding MGP_129S1SvImJ_T0074847.1 MGP_129S1SvImJ_G0030165.1 mouse_genomes_project 5 139382889 139384167 - MGP_129S1SvImJ_P0074847 Cldn13 protein_coding protein_coding MGP_129S1SvImJ_T0070513.1 MGP_129S1SvImJ_G0029356.1 mouse_genomes_project 5 22563973 22604557 - MGP_129S1SvImJ_P0070513 Rheb protein_coding protein_coding MGP_129S1SvImJ_T0070514.1 MGP_129S1SvImJ_G0029356.1 mouse_genomes_project 5 22564817 22576092 - Rheb protein_coding retained_intron MGP_129S1SvImJ_T0070515.1 MGP_129S1SvImJ_G0029356.1 mouse_genomes_project 5 22572275 22604361 - Rheb protein_coding retained_intron MGP_129S1SvImJ_T0070516.1 MGP_129S1SvImJ_G0029356.1 mouse_genomes_project 5 22601924 22604542 - Rheb protein_coding retained_intron MGP_129S1SvImJ_T0008137.1 MGP_129S1SvImJ_G0006634.1 mouse_genomes_project 5 43878415 43943095 - Gm43303 lincRNA lincRNA MGP_129S1SvImJ_T0074886.1 MGP_129S1SvImJ_G0030172.1 mouse_genomes_project 5 139561337 139562998 + MGP_129S1SvImJ_P0074886 Dnajc30 protein_coding protein_coding MGP_129S1SvImJ_T0075275.1 MGP_129S1SvImJ_G0030245.1 mouse_genomes_project 5 142583973 142618043 + MGP_129S1SvImJ_P0075275 Zcwpw1 protein_coding protein_coding MGP_129S1SvImJ_T0075276.1 MGP_129S1SvImJ_G0030245.1 mouse_genomes_project 5 142591332 142594473 + Zcwpw1 protein_coding retained_intron MGP_129S1SvImJ_T0075277.1 MGP_129S1SvImJ_G0030245.1 mouse_genomes_project 5 142597776 142599657 + Zcwpw1 protein_coding retained_intron MGP_129S1SvImJ_T0075278.1 MGP_129S1SvImJ_G0030245.1 mouse_genomes_project 5 142598005 142610197 + Zcwpw1 protein_coding processed_transcript MGP_129S1SvImJ_T0075279.1 MGP_129S1SvImJ_G0030245.1 mouse_genomes_project 5 142609413 142617743 + MGP_129S1SvImJ_P0075279 Zcwpw1 protein_coding protein_coding MGP_129S1SvImJ_T0071444.1 MGP_129S1SvImJ_G0029510.1 mouse_genomes_project 5 36684797 36712947 + MGP_129S1SvImJ_P0071444 Otop1 protein_coding protein_coding MGP_129S1SvImJ_T0071445.1 MGP_129S1SvImJ_G0029510.1 mouse_genomes_project 5 36686229 36712955 + Otop1 protein_coding processed_transcript MGP_129S1SvImJ_T0071446.1 MGP_129S1SvImJ_G0029510.1 mouse_genomes_project 5 36686229 36712946 + MGP_129S1SvImJ_P0071446 Otop1 protein_coding protein_coding MGP_129S1SvImJ_T0071447.1 MGP_129S1SvImJ_G0029510.1 mouse_genomes_project 5 36694842 36712115 + Otop1 protein_coding processed_transcript MGP_129S1SvImJ_T0074639.1 MGP_129S1SvImJ_G0030132.1 mouse_genomes_project 5 133921601 133948845 + MGP_129S1SvImJ_P0074639 Sumf2 protein_coding protein_coding MGP_129S1SvImJ_T0074640.1 MGP_129S1SvImJ_G0030132.1 mouse_genomes_project 5 133921626 133936473 + MGP_129S1SvImJ_P0074640 Sumf2 protein_coding protein_coding MGP_129S1SvImJ_T0074641.1 MGP_129S1SvImJ_G0030132.1 mouse_genomes_project 5 133921635 133936563 + Sumf2 protein_coding processed_transcript MGP_129S1SvImJ_T0074642.1 MGP_129S1SvImJ_G0030132.1 mouse_genomes_project 5 133921635 133948202 + MGP_129S1SvImJ_P0074642 Sumf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074643.1 MGP_129S1SvImJ_G0030132.1 mouse_genomes_project 5 133934237 133947569 + Sumf2 protein_coding processed_transcript MGP_129S1SvImJ_T0074644.1 MGP_129S1SvImJ_G0030132.1 mouse_genomes_project 5 133934237 133947569 + Sumf2 protein_coding processed_transcript MGP_129S1SvImJ_T0074650.1 MGP_129S1SvImJ_G0030134.1 mouse_genomes_project 5 133993635 134005731 + MGP_129S1SvImJ_P0074650 Zbed5 protein_coding protein_coding MGP_129S1SvImJ_T0074651.1 MGP_129S1SvImJ_G0030134.1 mouse_genomes_project 5 133993680 133997090 + Zbed5 protein_coding retained_intron MGP_129S1SvImJ_T0101735.1 MGP_129S1SvImJ_G0039733.1 mouse_genomes_project 5 154965075 154967293 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101736.1 MGP_129S1SvImJ_G0039733.1 mouse_genomes_project 5 154966712 154967483 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0073531.1 MGP_129S1SvImJ_G0029936.1 mouse_genomes_project 5 117098508 117116472 - MGP_129S1SvImJ_P0073531 Kctd10 protein_coding protein_coding MGP_129S1SvImJ_T0073532.1 MGP_129S1SvImJ_G0029936.1 mouse_genomes_project 5 117099403 117116453 - MGP_129S1SvImJ_P0073532 Kctd10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073533.1 MGP_129S1SvImJ_G0029936.1 mouse_genomes_project 5 117100562 117116447 - MGP_129S1SvImJ_P0073533 Kctd10 protein_coding protein_coding MGP_129S1SvImJ_T0073534.1 MGP_129S1SvImJ_G0029936.1 mouse_genomes_project 5 117100646 117107070 - Kctd10 protein_coding processed_transcript MGP_129S1SvImJ_T0073535.1 MGP_129S1SvImJ_G0029936.1 mouse_genomes_project 5 117101823 117103598 - Kctd10 protein_coding retained_intron MGP_129S1SvImJ_T0073536.1 MGP_129S1SvImJ_G0029936.1 mouse_genomes_project 5 117101843 117105140 - Kctd10 protein_coding retained_intron MGP_129S1SvImJ_T0073537.1 MGP_129S1SvImJ_G0029936.1 mouse_genomes_project 5 117101924 117104183 - Kctd10 protein_coding retained_intron MGP_129S1SvImJ_T0014924.1 MGP_129S1SvImJ_G0013013.1 mouse_genomes_project 5 21948924 21949567 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001597.1 MGP_129S1SvImJ_G0001514.1 mouse_genomes_project 5 47967399 47971554 - TEC TEC MGP_129S1SvImJ_T0073184.1 MGP_129S1SvImJ_G0029863.1 mouse_genomes_project 5 110800506 110806243 - MGP_129S1SvImJ_P0073184 Slc26a1 protein_coding protein_coding MGP_129S1SvImJ_T0073185.1 MGP_129S1SvImJ_G0029863.1 mouse_genomes_project 5 110801173 110805427 - MGP_129S1SvImJ_P0073185 Slc26a1 protein_coding protein_coding MGP_129S1SvImJ_T0073186.1 MGP_129S1SvImJ_G0029863.1 mouse_genomes_project 5 110801190 110805427 - MGP_129S1SvImJ_P0073186 Slc26a1 protein_coding protein_coding MGP_129S1SvImJ_T0073187.1 MGP_129S1SvImJ_G0029863.1 mouse_genomes_project 5 110802723 110805459 - MGP_129S1SvImJ_P0073187 Slc26a1 protein_coding protein_coding MGP_129S1SvImJ_T0001486.1 MGP_129S1SvImJ_G0001407.1 mouse_genomes_project 5 13978485 13979971 + TEC TEC MGP_129S1SvImJ_T0001688.1 MGP_129S1SvImJ_G0001604.1 mouse_genomes_project 5 67632866 67634167 - TEC TEC MGP_129S1SvImJ_T0070703.1 MGP_129S1SvImJ_G0029396.1 mouse_genomes_project 5 28769218 28821618 + MGP_129S1SvImJ_P0070703 Mapre3 protein_coding protein_coding MGP_129S1SvImJ_T0070704.1 MGP_129S1SvImJ_G0029396.1 mouse_genomes_project 5 28769310 28821571 + Mapre3 protein_coding retained_intron MGP_129S1SvImJ_T0070705.1 MGP_129S1SvImJ_G0029396.1 mouse_genomes_project 5 28769331 28821571 + MGP_129S1SvImJ_P0070705 Mapre3 protein_coding protein_coding MGP_129S1SvImJ_T0070706.1 MGP_129S1SvImJ_G0029396.1 mouse_genomes_project 5 28769337 28818089 + Mapre3 protein_coding retained_intron MGP_129S1SvImJ_T0070707.1 MGP_129S1SvImJ_G0029396.1 mouse_genomes_project 5 28809310 28818870 + MGP_129S1SvImJ_P0070707 Mapre3 protein_coding protein_coding MGP_129S1SvImJ_T0070708.1 MGP_129S1SvImJ_G0029396.1 mouse_genomes_project 5 28820033 28820767 + Mapre3 protein_coding retained_intron MGP_129S1SvImJ_T0075155.1 MGP_129S1SvImJ_G0030223.1 mouse_genomes_project 5 142041220 142045961 - MGP_129S1SvImJ_P0075155 Trip6 protein_coding protein_coding MGP_129S1SvImJ_T0075156.1 MGP_129S1SvImJ_G0030223.1 mouse_genomes_project 5 142044509 142045748 - MGP_129S1SvImJ_P0075156 Trip6 protein_coding protein_coding MGP_129S1SvImJ_T0075157.1 MGP_129S1SvImJ_G0030223.1 mouse_genomes_project 5 142044536 142045719 - Trip6 protein_coding retained_intron MGP_129S1SvImJ_T0075158.1 MGP_129S1SvImJ_G0030223.1 mouse_genomes_project 5 142044915 142045765 - Trip6 protein_coding processed_transcript MGP_129S1SvImJ_T0070623.1 MGP_129S1SvImJ_G0029381.1 mouse_genomes_project 5 28031836 28046087 - MGP_129S1SvImJ_P0070623 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0070624.1 MGP_129S1SvImJ_G0029381.1 mouse_genomes_project 5 28031904 28046154 - protein_coding retained_intron MGP_129S1SvImJ_T0070625.1 MGP_129S1SvImJ_G0029381.1 mouse_genomes_project 5 28031971 28046109 - MGP_129S1SvImJ_P0070625 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070626.1 MGP_129S1SvImJ_G0029381.1 mouse_genomes_project 5 28032820 28046121 - MGP_129S1SvImJ_P0070626 protein_coding protein_coding MGP_129S1SvImJ_T0070627.1 MGP_129S1SvImJ_G0029381.1 mouse_genomes_project 5 28033855 28046092 - MGP_129S1SvImJ_P0070627 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070628.1 MGP_129S1SvImJ_G0029381.1 mouse_genomes_project 5 28034465 28046126 - protein_coding retained_intron MGP_129S1SvImJ_T0070629.1 MGP_129S1SvImJ_G0029381.1 mouse_genomes_project 5 28034722 28046116 - MGP_129S1SvImJ_P0070629 protein_coding protein_coding MGP_129S1SvImJ_T0070630.1 MGP_129S1SvImJ_G0029381.1 mouse_genomes_project 5 28039599 28046062 - protein_coding processed_transcript MGP_129S1SvImJ_T0075447.1 MGP_129S1SvImJ_G0030279.1 mouse_genomes_project 5 144228764 144268864 - Adap1 protein_coding processed_transcript MGP_129S1SvImJ_T0075448.1 MGP_129S1SvImJ_G0030279.1 mouse_genomes_project 5 144228764 144293536 - MGP_129S1SvImJ_P0075448 Adap1 protein_coding protein_coding MGP_129S1SvImJ_T0075449.1 MGP_129S1SvImJ_G0030279.1 mouse_genomes_project 5 144229664 144265695 - Adap1 protein_coding processed_transcript MGP_129S1SvImJ_T0075450.1 MGP_129S1SvImJ_G0030279.1 mouse_genomes_project 5 144229746 144268836 - Adap1 protein_coding processed_transcript MGP_129S1SvImJ_T0075451.1 MGP_129S1SvImJ_G0030279.1 mouse_genomes_project 5 144229818 144234514 - Adap1 protein_coding retained_intron MGP_129S1SvImJ_T0075452.1 MGP_129S1SvImJ_G0030279.1 mouse_genomes_project 5 144240202 144273485 - Adap1 protein_coding retained_intron MGP_129S1SvImJ_T0072933.1 MGP_129S1SvImJ_G0029807.1 mouse_genomes_project 5 105716345 105728012 + MGP_129S1SvImJ_P0072933 Nudt9 protein_coding protein_coding MGP_129S1SvImJ_T0072934.1 MGP_129S1SvImJ_G0029807.1 mouse_genomes_project 5 105716565 105729592 + MGP_129S1SvImJ_P0072934 Nudt9 protein_coding protein_coding MGP_129S1SvImJ_T0072935.1 MGP_129S1SvImJ_G0029807.1 mouse_genomes_project 5 105716908 105735212 + MGP_129S1SvImJ_P0072935 Nudt9 protein_coding protein_coding MGP_129S1SvImJ_T0072936.1 MGP_129S1SvImJ_G0029807.1 mouse_genomes_project 5 105717007 105728246 + Nudt9 protein_coding retained_intron MGP_129S1SvImJ_T0072937.1 MGP_129S1SvImJ_G0029807.1 mouse_genomes_project 5 105717193 105727992 + MGP_129S1SvImJ_P0072937 Nudt9 protein_coding protein_coding MGP_129S1SvImJ_T0072938.1 MGP_129S1SvImJ_G0029807.1 mouse_genomes_project 5 105717660 105725341 + MGP_129S1SvImJ_P0072938 Nudt9 protein_coding protein_coding MGP_129S1SvImJ_T0015064.1 MGP_129S1SvImJ_G0013153.1 mouse_genomes_project 5 79948683 79949794 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001546.1 MGP_129S1SvImJ_G0001464.1 mouse_genomes_project 5 42389564 42390927 - TEC TEC MGP_129S1SvImJ_T0015113.1 MGP_129S1SvImJ_G0013202.1 mouse_genomes_project 5 105650771 105650993 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070256.1 MGP_129S1SvImJ_G0029307.1 mouse_genomes_project 5 15356963 15425601 + MGP_129S1SvImJ_P0070256 Gnat3 protein_coding protein_coding MGP_129S1SvImJ_T0008092.1 MGP_129S1SvImJ_G0006604.1 mouse_genomes_project 5 28064824 28068218 + lincRNA lincRNA MGP_129S1SvImJ_T0101182.1 MGP_129S1SvImJ_G0039249.1 mouse_genomes_project 5 37988258 37988387 - Gm25377 snoRNA snoRNA MGP_129S1SvImJ_T0074200.1 MGP_129S1SvImJ_G0030060.1 mouse_genomes_project 5 126547406 126667839 - MGP_129S1SvImJ_P0074200 Kdm2b protein_coding protein_coding MGP_129S1SvImJ_T0074201.1 MGP_129S1SvImJ_G0030060.1 mouse_genomes_project 5 126547409 126576429 - MGP_129S1SvImJ_P0074201 Kdm2b protein_coding protein_coding MGP_129S1SvImJ_T0074202.1 MGP_129S1SvImJ_G0030060.1 mouse_genomes_project 5 126547420 126668036 - MGP_129S1SvImJ_P0074202 Kdm2b protein_coding protein_coding MGP_129S1SvImJ_T0074203.1 MGP_129S1SvImJ_G0030060.1 mouse_genomes_project 5 126547422 126667273 - MGP_129S1SvImJ_P0074203 Kdm2b protein_coding protein_coding MGP_129S1SvImJ_T0074204.1 MGP_129S1SvImJ_G0030060.1 mouse_genomes_project 5 126547707 126668524 - MGP_129S1SvImJ_P0074204 Kdm2b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074205.1 MGP_129S1SvImJ_G0030060.1 mouse_genomes_project 5 126548044 126576276 - MGP_129S1SvImJ_P0074205 Kdm2b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0074206.1 MGP_129S1SvImJ_G0030060.1 mouse_genomes_project 5 126548459 126668553 - MGP_129S1SvImJ_P0074206 Kdm2b protein_coding protein_coding MGP_129S1SvImJ_T0074207.1 MGP_129S1SvImJ_G0030060.1 mouse_genomes_project 5 126552236 126557831 - Kdm2b protein_coding retained_intron MGP_129S1SvImJ_T0074208.1 MGP_129S1SvImJ_G0030060.1 mouse_genomes_project 5 126557253 126563053 - MGP_129S1SvImJ_P0074208 Kdm2b protein_coding protein_coding MGP_129S1SvImJ_T0074209.1 MGP_129S1SvImJ_G0030060.1 mouse_genomes_project 5 126557380 126558979 - Kdm2b protein_coding retained_intron MGP_129S1SvImJ_T0074210.1 MGP_129S1SvImJ_G0030060.1 mouse_genomes_project 5 126558961 126595080 - Kdm2b protein_coding processed_transcript MGP_129S1SvImJ_T0074211.1 MGP_129S1SvImJ_G0030060.1 mouse_genomes_project 5 126560173 126599463 - Kdm2b protein_coding processed_transcript MGP_129S1SvImJ_T0074212.1 MGP_129S1SvImJ_G0030060.1 mouse_genomes_project 5 126560183 126598904 - Kdm2b protein_coding retained_intron MGP_129S1SvImJ_T0074213.1 MGP_129S1SvImJ_G0030060.1 mouse_genomes_project 5 126562477 126667832 - Kdm2b protein_coding retained_intron MGP_129S1SvImJ_T0074214.1 MGP_129S1SvImJ_G0030060.1 mouse_genomes_project 5 126610121 126667276 - MGP_129S1SvImJ_P0074214 Kdm2b protein_coding protein_coding MGP_129S1SvImJ_T0074215.1 MGP_129S1SvImJ_G0030060.1 mouse_genomes_project 5 126610224 126631440 - MGP_129S1SvImJ_P0074215 Kdm2b protein_coding protein_coding MGP_129S1SvImJ_T0074216.1 MGP_129S1SvImJ_G0030060.1 mouse_genomes_project 5 126610307 126626901 - Kdm2b protein_coding processed_transcript MGP_129S1SvImJ_T0074217.1 MGP_129S1SvImJ_G0030060.1 mouse_genomes_project 5 126612476 126632048 - Kdm2b protein_coding processed_transcript MGP_129S1SvImJ_T0074218.1 MGP_129S1SvImJ_G0030060.1 mouse_genomes_project 5 126612496 126630924 - Kdm2b protein_coding processed_transcript MGP_129S1SvImJ_T0074219.1 MGP_129S1SvImJ_G0030060.1 mouse_genomes_project 5 126619538 126667839 - Kdm2b protein_coding retained_intron MGP_129S1SvImJ_T0074220.1 MGP_129S1SvImJ_G0030060.1 mouse_genomes_project 5 126626641 126663693 - Kdm2b protein_coding processed_transcript MGP_129S1SvImJ_T0073402.1 MGP_129S1SvImJ_G0029912.1 mouse_genomes_project 5 115689032 115700747 - MGP_129S1SvImJ_P0073402 Crybb2 protein_coding protein_coding MGP_129S1SvImJ_T0073403.1 MGP_129S1SvImJ_G0029912.1 mouse_genomes_project 5 115689039 115699396 - MGP_129S1SvImJ_P0073403 Crybb2 protein_coding protein_coding MGP_129S1SvImJ_T0073404.1 MGP_129S1SvImJ_G0029912.1 mouse_genomes_project 5 115693765 115699087 - Crybb2 protein_coding processed_transcript MGP_129S1SvImJ_T0073405.1 MGP_129S1SvImJ_G0029912.1 mouse_genomes_project 5 115698683 115699401 - Crybb2 protein_coding processed_transcript MGP_129S1SvImJ_T0073406.1 MGP_129S1SvImJ_G0029912.1 mouse_genomes_project 5 115699321 115700124 - Crybb2 protein_coding processed_transcript MGP_129S1SvImJ_T0070421.1 MGP_129S1SvImJ_G0029340.1 mouse_genomes_project 5 22116903 22125953 + MGP_129S1SvImJ_P0070421 Abcb8 protein_coding protein_coding MGP_129S1SvImJ_T0070422.1 MGP_129S1SvImJ_G0029340.1 mouse_genomes_project 5 22116916 22135775 + MGP_129S1SvImJ_P0070422 Abcb8 protein_coding protein_coding MGP_129S1SvImJ_T0070423.1 MGP_129S1SvImJ_G0029340.1 mouse_genomes_project 5 22117405 22135666 + MGP_129S1SvImJ_P0070423 Abcb8 protein_coding protein_coding MGP_129S1SvImJ_T0070424.1 MGP_129S1SvImJ_G0029340.1 mouse_genomes_project 5 22117646 22129706 + Abcb8 protein_coding processed_transcript MGP_129S1SvImJ_T0070425.1 MGP_129S1SvImJ_G0029340.1 mouse_genomes_project 5 22117658 22126396 + Abcb8 protein_coding retained_intron MGP_129S1SvImJ_T0070426.1 MGP_129S1SvImJ_G0029340.1 mouse_genomes_project 5 22126328 22135668 + MGP_129S1SvImJ_P0070426 Abcb8 protein_coding protein_coding MGP_129S1SvImJ_T0070427.1 MGP_129S1SvImJ_G0029340.1 mouse_genomes_project 5 22127984 22132440 + Abcb8 protein_coding retained_intron MGP_129S1SvImJ_T0070428.1 MGP_129S1SvImJ_G0029340.1 mouse_genomes_project 5 22131543 22135667 + Abcb8 protein_coding retained_intron MGP_129S1SvImJ_T0070429.1 MGP_129S1SvImJ_G0029340.1 mouse_genomes_project 5 22132136 22135645 + MGP_129S1SvImJ_P0070429 Abcb8 protein_coding protein_coding MGP_129S1SvImJ_T0073971.1 MGP_129S1SvImJ_G0030026.1 mouse_genomes_project 5 124875402 124927392 + MGP_129S1SvImJ_P0073971 Naa25 protein_coding protein_coding MGP_129S1SvImJ_T0073972.1 MGP_129S1SvImJ_G0030026.1 mouse_genomes_project 5 124875460 124923798 + MGP_129S1SvImJ_P0073972 Naa25 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073973.1 MGP_129S1SvImJ_G0030026.1 mouse_genomes_project 5 124875461 124911498 + Naa25 protein_coding retained_intron MGP_129S1SvImJ_T0073974.1 MGP_129S1SvImJ_G0030026.1 mouse_genomes_project 5 124875471 124924909 + MGP_129S1SvImJ_P0073974 Naa25 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073976.1 MGP_129S1SvImJ_G0030026.1 mouse_genomes_project 5 124924395 124929360 + MGP_129S1SvImJ_P0073976 Naa25 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073977.1 MGP_129S1SvImJ_G0030026.1 mouse_genomes_project 5 124924980 124925494 + Naa25 protein_coding processed_transcript MGP_129S1SvImJ_T0008329.1 MGP_129S1SvImJ_G0006772.1 mouse_genomes_project 5 118537743 118538511 - 1110006O24Rik lincRNA lincRNA MGP_129S1SvImJ_T0070206.1 MGP_129S1SvImJ_G0029295.1 mouse_genomes_project 5 10313286 10523964 + Sema3a protein_coding processed_transcript MGP_129S1SvImJ_T0070207.1 MGP_129S1SvImJ_G0029295.1 mouse_genomes_project 5 10313364 10506832 + Sema3a protein_coding retained_intron MGP_129S1SvImJ_T0070208.1 MGP_129S1SvImJ_G0029295.1 mouse_genomes_project 5 10313465 10758499 + Sema3a protein_coding retained_intron MGP_129S1SvImJ_T0070209.1 MGP_129S1SvImJ_G0029295.1 mouse_genomes_project 5 10614744 10838901 + MGP_129S1SvImJ_P0070209 Sema3a protein_coding protein_coding MGP_129S1SvImJ_T0070210.1 MGP_129S1SvImJ_G0029295.1 mouse_genomes_project 5 10616458 10670574 + MGP_129S1SvImJ_P0070210 Sema3a protein_coding protein_coding MGP_129S1SvImJ_T0070211.1 MGP_129S1SvImJ_G0029295.1 mouse_genomes_project 5 10616767 10837261 + MGP_129S1SvImJ_P0070211 Sema3a protein_coding protein_coding MGP_129S1SvImJ_T0070212.1 MGP_129S1SvImJ_G0029295.1 mouse_genomes_project 5 10617044 10840478 + MGP_129S1SvImJ_P0070212 Sema3a protein_coding protein_coding MGP_129S1SvImJ_T0070213.1 MGP_129S1SvImJ_G0029295.1 mouse_genomes_project 5 10617059 10670544 + MGP_129S1SvImJ_P0070213 Sema3a protein_coding protein_coding MGP_129S1SvImJ_T0070214.1 MGP_129S1SvImJ_G0029295.1 mouse_genomes_project 5 10617312 10724641 + Sema3a protein_coding processed_transcript MGP_129S1SvImJ_T0001461.1 MGP_129S1SvImJ_G0001382.1 mouse_genomes_project 5 5641955 5645570 + TEC TEC MGP_129S1SvImJ_T0001682.1 MGP_129S1SvImJ_G0001598.1 mouse_genomes_project 5 66895093 66897763 + TEC TEC MGP_129S1SvImJ_T0001694.1 MGP_129S1SvImJ_G0001610.1 mouse_genomes_project 5 69059373 69062243 - TEC TEC MGP_129S1SvImJ_T0008493.1 MGP_129S1SvImJ_G0006887.1 mouse_genomes_project 5 156827694 156850053 - Gm43298 lincRNA lincRNA MGP_129S1SvImJ_T0008077.1 MGP_129S1SvImJ_G0006595.1 mouse_genomes_project 5 23329548 23331000 + 1700096K18Rik lincRNA lincRNA MGP_129S1SvImJ_T0073981.1 MGP_129S1SvImJ_G0030028.1 mouse_genomes_project 5 124936877 125017001 + MGP_129S1SvImJ_P0073981 Tmem116 protein_coding protein_coding MGP_129S1SvImJ_T0073982.1 MGP_129S1SvImJ_G0030028.1 mouse_genomes_project 5 124937559 124983809 + MGP_129S1SvImJ_P0073982 Tmem116 protein_coding protein_coding MGP_129S1SvImJ_T0073983.1 MGP_129S1SvImJ_G0030028.1 mouse_genomes_project 5 124937559 124982849 + MGP_129S1SvImJ_P0073983 Tmem116 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073984.1 MGP_129S1SvImJ_G0030028.1 mouse_genomes_project 5 124937609 124968375 + MGP_129S1SvImJ_P0073984 Tmem116 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073985.1 MGP_129S1SvImJ_G0030028.1 mouse_genomes_project 5 124937690 124968375 + Tmem116 protein_coding processed_transcript MGP_129S1SvImJ_T0073986.1 MGP_129S1SvImJ_G0030028.1 mouse_genomes_project 5 124947878 124983816 + MGP_129S1SvImJ_P0073986 Tmem116 protein_coding protein_coding MGP_129S1SvImJ_T0073987.1 MGP_129S1SvImJ_G0030028.1 mouse_genomes_project 5 124947949 124983589 + MGP_129S1SvImJ_P0073987 Tmem116 protein_coding protein_coding MGP_129S1SvImJ_T0001802.1 MGP_129S1SvImJ_G0001717.1 mouse_genomes_project 5 119461833 119463200 - TEC TEC MGP_129S1SvImJ_T0011623.1 MGP_129S1SvImJ_G0009739.1 mouse_genomes_project 5 111945927 111946012 + Gm28000 misc_RNA misc_RNA MGP_129S1SvImJ_T0001559.1 MGP_129S1SvImJ_G0001477.1 mouse_genomes_project 5 43283641 43287428 - TEC TEC MGP_129S1SvImJ_T0102591.1 MGP_129S1SvImJ_G0040424.1 mouse_genomes_project 5 157642682 157642770 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0075579.1 MGP_129S1SvImJ_G0030310.1 mouse_genomes_project 5 147627152 147645246 + MGP_129S1SvImJ_P0075579 Foxk1 protein_coding protein_coding MGP_129S1SvImJ_T0075580.1 MGP_129S1SvImJ_G0030310.1 mouse_genomes_project 5 147627155 147691920 + MGP_129S1SvImJ_P0075580 Foxk1 protein_coding protein_coding MGP_129S1SvImJ_T0008221.1 MGP_129S1SvImJ_G0006705.1 mouse_genomes_project 5 98421416 98428216 + Gm43146 lincRNA lincRNA MGP_129S1SvImJ_T0015027.1 MGP_129S1SvImJ_G0013116.1 mouse_genomes_project 5 63766346 63767304 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004896.1 MGP_129S1SvImJ_G0004212.1 mouse_genomes_project 5 145259035 145264002 + Gm16120 antisense antisense MGP_129S1SvImJ_T0004897.1 MGP_129S1SvImJ_G0004212.1 mouse_genomes_project 5 145262792 145264002 + Gm16120 antisense antisense MGP_129S1SvImJ_T0099924.1 MGP_129S1SvImJ_G0037991.1 mouse_genomes_project 5 69599540 69599666 - Gm26044 snRNA snRNA MGP_129S1SvImJ_T0001775.1 MGP_129S1SvImJ_G0001690.1 mouse_genomes_project 5 112130897 112442752 - TEC TEC MGP_129S1SvImJ_T0070337.1 MGP_129S1SvImJ_G0029325.1 mouse_genomes_project 5 19392485 19452994 - MGP_129S1SvImJ_P0070337 Slc26a5 protein_coding protein_coding MGP_129S1SvImJ_T0070338.1 MGP_129S1SvImJ_G0029325.1 mouse_genomes_project 5 19392485 19449388 - MGP_129S1SvImJ_P0070338 Slc26a5 protein_coding protein_coding MGP_129S1SvImJ_T0070339.1 MGP_129S1SvImJ_G0029325.1 mouse_genomes_project 5 19392848 19434730 - MGP_129S1SvImJ_P0070339 Slc26a5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070340.1 MGP_129S1SvImJ_G0029325.1 mouse_genomes_project 5 19392979 19434682 - MGP_129S1SvImJ_P0070340 Slc26a5 protein_coding protein_coding MGP_129S1SvImJ_T0070341.1 MGP_129S1SvImJ_G0029325.1 mouse_genomes_project 5 19399354 19405943 - Slc26a5 protein_coding retained_intron MGP_129S1SvImJ_T0098606.1 MGP_129S1SvImJ_G0036691.1 mouse_genomes_project 5 93275009 93275116 - Gm24931 rRNA rRNA MGP_129S1SvImJ_T0071652.1 MGP_129S1SvImJ_G0029545.1 mouse_genomes_project 5 51345932 51445184 - MGP_129S1SvImJ_P0071652 Ccdc149 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0071653.1 MGP_129S1SvImJ_G0029545.1 mouse_genomes_project 5 51345938 51445269 - MGP_129S1SvImJ_P0071653 Ccdc149 protein_coding protein_coding MGP_129S1SvImJ_T0071654.1 MGP_129S1SvImJ_G0029545.1 mouse_genomes_project 5 51345938 51445307 - MGP_129S1SvImJ_P0071654 Ccdc149 protein_coding protein_coding MGP_129S1SvImJ_T0072959.1 MGP_129S1SvImJ_G0029817.1 mouse_genomes_project 5 106568759 106570485 - protein_coding processed_transcript MGP_129S1SvImJ_T0001842.1 MGP_129S1SvImJ_G0001757.1 mouse_genomes_project 5 127432516 127433048 + TEC TEC MGP_129S1SvImJ_T0101203.1 MGP_129S1SvImJ_G0039270.1 mouse_genomes_project 5 90859468 90859597 + Gm25758 snoRNA snoRNA MGP_129S1SvImJ_T0004680.1 MGP_129S1SvImJ_G0004056.1 mouse_genomes_project 5 32322960 32340555 + 4930557J02Rik antisense antisense MGP_129S1SvImJ_T0008050.1 MGP_129S1SvImJ_G0006576.1 mouse_genomes_project 5 4654858 4918623 - lincRNA lincRNA MGP_129S1SvImJ_T0072637.1 MGP_129S1SvImJ_G0029748.1 mouse_genomes_project 5 93501537 93509633 - MGP_129S1SvImJ_P0072637 Cxcl9 protein_coding protein_coding MGP_129S1SvImJ_T0072638.1 MGP_129S1SvImJ_G0029748.1 mouse_genomes_project 5 93508176 93509632 - Cxcl9 protein_coding retained_intron MGP_129S1SvImJ_T0010705.1 MGP_129S1SvImJ_G0008821.1 mouse_genomes_project 5 66819860 66819974 - Gm23841 miRNA miRNA MGP_129S1SvImJ_T0015211.1 MGP_129S1SvImJ_G0013300.1 mouse_genomes_project 5 147877754 147877983 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0014991.1 MGP_129S1SvImJ_G0013080.1 mouse_genomes_project 5 48778189 48780486 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001533.1 MGP_129S1SvImJ_G0001451.1 mouse_genomes_project 5 34963287 34965842 + TEC TEC MGP_129S1SvImJ_T0004904.1 MGP_129S1SvImJ_G0004217.1 mouse_genomes_project 5 149226381 149288510 - Gm17135 antisense antisense MGP_129S1SvImJ_T0011610.1 MGP_129S1SvImJ_G0009726.1 mouse_genomes_project 5 22970150 22970433 - Gm26356 misc_RNA misc_RNA MGP_129S1SvImJ_T0071742.1 MGP_129S1SvImJ_G0029562.1 mouse_genomes_project 5 63208713 63365191 + Nwd2 protein_coding retained_intron MGP_129S1SvImJ_T0071743.1 MGP_129S1SvImJ_G0029562.1 mouse_genomes_project 5 63208719 63382227 + MGP_129S1SvImJ_P0071743 Nwd2 protein_coding protein_coding MGP_129S1SvImJ_T0071744.1 MGP_129S1SvImJ_G0029562.1 mouse_genomes_project 5 63208944 63372439 + MGP_129S1SvImJ_P0071744 Nwd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071745.1 MGP_129S1SvImJ_G0029562.1 mouse_genomes_project 5 63372253 63382227 + MGP_129S1SvImJ_P0071745 Nwd2 protein_coding protein_coding MGP_129S1SvImJ_T0018169.1 MGP_129S1SvImJ_G0015595.1 mouse_genomes_project 5 34926137 34958326 - Gm42936 processed_transcript processed_transcript MGP_129S1SvImJ_T0099939.1 MGP_129S1SvImJ_G0038006.1 mouse_genomes_project 5 87070997 87071104 - Gm25473 snRNA snRNA MGP_129S1SvImJ_T0015093.1 MGP_129S1SvImJ_G0013182.1 mouse_genomes_project 5 94418134 94418516 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015116.1 MGP_129S1SvImJ_G0013205.1 mouse_genomes_project 5 106410222 106470576 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101221.1 MGP_129S1SvImJ_G0039288.1 mouse_genomes_project 5 152445785 152445856 + Gm25091 snoRNA snoRNA MGP_129S1SvImJ_T0072451.1 MGP_129S1SvImJ_G0029692.1 mouse_genomes_project 5 88766108 88783379 + MGP_129S1SvImJ_P0072451 Csn1s2b protein_coding protein_coding MGP_129S1SvImJ_T0072452.1 MGP_129S1SvImJ_G0029692.1 mouse_genomes_project 5 88766149 88783370 + MGP_129S1SvImJ_P0072452 Csn1s2b protein_coding protein_coding MGP_129S1SvImJ_T0072453.1 MGP_129S1SvImJ_G0029692.1 mouse_genomes_project 5 88766150 88777415 + MGP_129S1SvImJ_P0072453 Csn1s2b protein_coding protein_coding MGP_129S1SvImJ_T0072454.1 MGP_129S1SvImJ_G0029692.1 mouse_genomes_project 5 88766153 88783274 + MGP_129S1SvImJ_P0072454 Csn1s2b protein_coding protein_coding MGP_129S1SvImJ_T0072455.1 MGP_129S1SvImJ_G0029692.1 mouse_genomes_project 5 88769366 88771429 + Csn1s2b protein_coding retained_intron MGP_129S1SvImJ_T0074889.1 MGP_129S1SvImJ_G0030174.1 mouse_genomes_project 5 139588380 139623022 + Mlxipl protein_coding processed_transcript MGP_129S1SvImJ_T0074890.1 MGP_129S1SvImJ_G0030174.1 mouse_genomes_project 5 139607086 139624278 + Mlxipl protein_coding retained_intron MGP_129S1SvImJ_T0074891.1 MGP_129S1SvImJ_G0030174.1 mouse_genomes_project 5 139607097 139624929 + MGP_129S1SvImJ_P0074891 Mlxipl protein_coding protein_coding MGP_129S1SvImJ_T0074892.1 MGP_129S1SvImJ_G0030174.1 mouse_genomes_project 5 139607099 139639158 + MGP_129S1SvImJ_P0074892 Mlxipl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074893.1 MGP_129S1SvImJ_G0030174.1 mouse_genomes_project 5 139607108 139639158 + MGP_129S1SvImJ_P0074893 Mlxipl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074894.1 MGP_129S1SvImJ_G0030174.1 mouse_genomes_project 5 139607108 139639158 + MGP_129S1SvImJ_P0074894 Mlxipl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074895.1 MGP_129S1SvImJ_G0030174.1 mouse_genomes_project 5 139607108 139639158 + MGP_129S1SvImJ_P0074895 Mlxipl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074896.1 MGP_129S1SvImJ_G0030174.1 mouse_genomes_project 5 139607113 139639618 + MGP_129S1SvImJ_P0074896 Mlxipl protein_coding protein_coding MGP_129S1SvImJ_T0074897.1 MGP_129S1SvImJ_G0030174.1 mouse_genomes_project 5 139634845 139635846 + MGP_129S1SvImJ_P0074897 Mlxipl protein_coding protein_coding MGP_129S1SvImJ_T0074898.1 MGP_129S1SvImJ_G0030174.1 mouse_genomes_project 5 139634866 139636974 + MGP_129S1SvImJ_P0074898 Mlxipl protein_coding protein_coding MGP_129S1SvImJ_T0072870.1 MGP_129S1SvImJ_G0029794.1 mouse_genomes_project 5 102360561 102361659 + MGP_129S1SvImJ_P0072870 Agpat9 protein_coding protein_coding MGP_129S1SvImJ_T0072871.1 MGP_129S1SvImJ_G0029794.1 mouse_genomes_project 5 102360978 102416153 + MGP_129S1SvImJ_P0072871 Agpat9 protein_coding protein_coding MGP_129S1SvImJ_T0072872.1 MGP_129S1SvImJ_G0029794.1 mouse_genomes_project 5 102361067 102416153 + MGP_129S1SvImJ_P0072872 Agpat9 protein_coding protein_coding MGP_129S1SvImJ_T0072873.1 MGP_129S1SvImJ_G0029794.1 mouse_genomes_project 5 102361212 102416156 + MGP_129S1SvImJ_P0072873 Agpat9 protein_coding protein_coding MGP_129S1SvImJ_T0072874.1 MGP_129S1SvImJ_G0029794.1 mouse_genomes_project 5 102361265 102361699 + MGP_129S1SvImJ_P0072874 Agpat9 protein_coding protein_coding MGP_129S1SvImJ_T0014905.1 MGP_129S1SvImJ_G0012994.1 mouse_genomes_project 5 19263560 19264216 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008212.1 MGP_129S1SvImJ_G0006696.1 mouse_genomes_project 5 92877503 92878534 - 1700063O14Rik lincRNA lincRNA MGP_129S1SvImJ_T0001777.1 MGP_129S1SvImJ_G0001692.1 mouse_genomes_project 5 113514761 113515495 + TEC TEC MGP_129S1SvImJ_T0004832.1 MGP_129S1SvImJ_G0004165.1 mouse_genomes_project 5 124011259 124012566 - Gm43579 antisense antisense MGP_129S1SvImJ_T0075618.1 MGP_129S1SvImJ_G0030319.1 mouse_genomes_project 5 148201910 148206756 - MGP_129S1SvImJ_P0075618 Actb protein_coding protein_coding MGP_129S1SvImJ_T0075619.1 MGP_129S1SvImJ_G0030319.1 mouse_genomes_project 5 148203667 148206704 - MGP_129S1SvImJ_P0075619 Actb protein_coding protein_coding MGP_129S1SvImJ_T0075620.1 MGP_129S1SvImJ_G0030319.1 mouse_genomes_project 5 148204360 148205831 - MGP_129S1SvImJ_P0075620 Actb protein_coding protein_coding MGP_129S1SvImJ_T0075621.1 MGP_129S1SvImJ_G0030319.1 mouse_genomes_project 5 148204404 148206727 - Actb protein_coding processed_transcript MGP_129S1SvImJ_T0075622.1 MGP_129S1SvImJ_G0030319.1 mouse_genomes_project 5 148204681 148206724 - MGP_129S1SvImJ_P0075622 Actb protein_coding protein_coding MGP_129S1SvImJ_T0075623.1 MGP_129S1SvImJ_G0030319.1 mouse_genomes_project 5 148204714 148205947 - MGP_129S1SvImJ_P0075623 Actb protein_coding protein_coding MGP_129S1SvImJ_T0075624.1 MGP_129S1SvImJ_G0030319.1 mouse_genomes_project 5 148204775 148206674 - Actb protein_coding retained_intron MGP_129S1SvImJ_T0075625.1 MGP_129S1SvImJ_G0030319.1 mouse_genomes_project 5 148204882 148206696 - Actb protein_coding retained_intron MGP_129S1SvImJ_T0014955.1 MGP_129S1SvImJ_G0013044.1 mouse_genomes_project 5 30976143 30976429 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072269.1 MGP_129S1SvImJ_G0029650.1 mouse_genomes_project 5 77165023 77181449 + MGP_129S1SvImJ_P0072269 Paics protein_coding protein_coding MGP_129S1SvImJ_T0072270.1 MGP_129S1SvImJ_G0029650.1 mouse_genomes_project 5 77165064 77181453 + MGP_129S1SvImJ_P0072270 Paics protein_coding protein_coding MGP_129S1SvImJ_T0072271.1 MGP_129S1SvImJ_G0029650.1 mouse_genomes_project 5 77165084 77181257 + MGP_129S1SvImJ_P0072271 Paics protein_coding protein_coding MGP_129S1SvImJ_T0072272.1 MGP_129S1SvImJ_G0029650.1 mouse_genomes_project 5 77165098 77173066 + MGP_129S1SvImJ_P0072272 Paics protein_coding protein_coding MGP_129S1SvImJ_T0072273.1 MGP_129S1SvImJ_G0029650.1 mouse_genomes_project 5 77165493 77176195 + MGP_129S1SvImJ_P0072273 Paics protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072274.1 MGP_129S1SvImJ_G0029650.1 mouse_genomes_project 5 77175191 77176686 + Paics protein_coding retained_intron MGP_129S1SvImJ_T0072275.1 MGP_129S1SvImJ_G0029650.1 mouse_genomes_project 5 77180100 77180785 + Paics protein_coding retained_intron MGP_129S1SvImJ_T0074997.1 MGP_129S1SvImJ_G0030196.1 mouse_genomes_project 5 140604894 140642808 + MGP_129S1SvImJ_P0074997 Dtx2 protein_coding protein_coding MGP_129S1SvImJ_T0074998.1 MGP_129S1SvImJ_G0030196.1 mouse_genomes_project 5 140604905 140642798 + MGP_129S1SvImJ_P0074998 Dtx2 protein_coding protein_coding MGP_129S1SvImJ_T0074999.1 MGP_129S1SvImJ_G0030196.1 mouse_genomes_project 5 140604938 140642805 + MGP_129S1SvImJ_P0074999 Dtx2 protein_coding protein_coding MGP_129S1SvImJ_T0075000.1 MGP_129S1SvImJ_G0030196.1 mouse_genomes_project 5 140604941 140622142 + MGP_129S1SvImJ_P0075000 Dtx2 protein_coding protein_coding MGP_129S1SvImJ_T0075001.1 MGP_129S1SvImJ_G0030196.1 mouse_genomes_project 5 140604952 140642800 + MGP_129S1SvImJ_P0075001 Dtx2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0075002.1 MGP_129S1SvImJ_G0030196.1 mouse_genomes_project 5 140604971 140642798 + MGP_129S1SvImJ_P0075002 Dtx2 protein_coding protein_coding MGP_129S1SvImJ_T0075003.1 MGP_129S1SvImJ_G0030196.1 mouse_genomes_project 5 140605051 140606352 + Dtx2 protein_coding processed_transcript MGP_129S1SvImJ_T0075004.1 MGP_129S1SvImJ_G0030196.1 mouse_genomes_project 5 140605186 140620058 + MGP_129S1SvImJ_P0075004 Dtx2 protein_coding protein_coding MGP_129S1SvImJ_T0075005.1 MGP_129S1SvImJ_G0030196.1 mouse_genomes_project 5 140629503 140642798 + Dtx2 protein_coding retained_intron MGP_129S1SvImJ_T0004812.1 MGP_129S1SvImJ_G0004153.1 mouse_genomes_project 5 119077088 119084467 + C330018A13Rik antisense antisense MGP_129S1SvImJ_T0011620.1 MGP_129S1SvImJ_G0009736.1 mouse_genomes_project 5 101911475 101911613 + Gm28030 misc_RNA misc_RNA MGP_129S1SvImJ_T0015024.1 MGP_129S1SvImJ_G0013113.1 mouse_genomes_project 5 63766346 63767217 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004893.1 MGP_129S1SvImJ_G0004209.1 mouse_genomes_project 5 144170942 144171830 - 4930520M14Rik antisense antisense MGP_129S1SvImJ_T0008250.1 MGP_129S1SvImJ_G0006725.1 mouse_genomes_project 5 104973496 104975117 + Gm42618 lincRNA lincRNA MGP_129S1SvImJ_T0074020.1 MGP_129S1SvImJ_G0030036.1 mouse_genomes_project 5 125206751 125238813 + MGP_129S1SvImJ_P0074020 Brap protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074021.1 MGP_129S1SvImJ_G0030036.1 mouse_genomes_project 5 125206778 125210164 + Brap protein_coding retained_intron MGP_129S1SvImJ_T0074022.1 MGP_129S1SvImJ_G0030036.1 mouse_genomes_project 5 125206944 125238819 + MGP_129S1SvImJ_P0074022 Brap protein_coding protein_coding MGP_129S1SvImJ_T0074023.1 MGP_129S1SvImJ_G0030036.1 mouse_genomes_project 5 125208225 125225815 + MGP_129S1SvImJ_P0074023 Brap protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074024.1 MGP_129S1SvImJ_G0030036.1 mouse_genomes_project 5 125208264 125209896 + Brap protein_coding retained_intron MGP_129S1SvImJ_T0074025.1 MGP_129S1SvImJ_G0030036.1 mouse_genomes_project 5 125214418 125238818 + Brap protein_coding processed_transcript MGP_129S1SvImJ_T0074026.1 MGP_129S1SvImJ_G0030036.1 mouse_genomes_project 5 125234477 125238815 + Brap protein_coding retained_intron MGP_129S1SvImJ_T0099965.1 MGP_129S1SvImJ_G0038032.1 mouse_genomes_project 5 127095834 127096003 + Gm23458 snRNA snRNA MGP_129S1SvImJ_T0015019.1 MGP_129S1SvImJ_G0013108.1 mouse_genomes_project 5 61105983 61106452 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099929.1 MGP_129S1SvImJ_G0037996.1 mouse_genomes_project 5 72938783 72938869 - Gm24776 snRNA snRNA MGP_129S1SvImJ_T0072416.1 MGP_129S1SvImJ_G0029688.1 mouse_genomes_project 5 88515872 88533675 - MGP_129S1SvImJ_P0072416 Sult1e1 protein_coding protein_coding MGP_129S1SvImJ_T0075349.1 MGP_129S1SvImJ_G0030263.1 mouse_genomes_project 5 143105280 143109188 + MGP_129S1SvImJ_P0075349 Lamtor4 protein_coding protein_coding MGP_129S1SvImJ_T0075350.1 MGP_129S1SvImJ_G0030263.1 mouse_genomes_project 5 143105629 143109191 + Lamtor4 protein_coding processed_transcript MGP_129S1SvImJ_T0011625.1 MGP_129S1SvImJ_G0009741.1 mouse_genomes_project 5 113827066 113827226 - Gm27680 misc_RNA misc_RNA MGP_129S1SvImJ_T0074016.1 MGP_129S1SvImJ_G0030035.1 mouse_genomes_project 5 125132769 125206657 - MGP_129S1SvImJ_P0074016 Acad10 protein_coding protein_coding MGP_129S1SvImJ_T0074017.1 MGP_129S1SvImJ_G0030035.1 mouse_genomes_project 5 125132771 125206692 - MGP_129S1SvImJ_P0074017 Acad10 protein_coding protein_coding MGP_129S1SvImJ_T0074018.1 MGP_129S1SvImJ_G0030035.1 mouse_genomes_project 5 125132772 125176834 - Acad10 protein_coding retained_intron MGP_129S1SvImJ_T0074019.1 MGP_129S1SvImJ_G0030035.1 mouse_genomes_project 5 125182138 125188444 - Acad10 protein_coding processed_transcript MGP_129S1SvImJ_T0001855.1 MGP_129S1SvImJ_G0001769.1 mouse_genomes_project 5 132237860 132240957 - TEC TEC MGP_129S1SvImJ_T0074840.1 MGP_129S1SvImJ_G0030163.1 mouse_genomes_project 5 139138078 139182766 - MGP_129S1SvImJ_P0074840 Eln protein_coding protein_coding MGP_129S1SvImJ_T0074841.1 MGP_129S1SvImJ_G0030163.1 mouse_genomes_project 5 139138323 139160786 - Eln protein_coding retained_intron MGP_129S1SvImJ_T0074842.1 MGP_129S1SvImJ_G0030163.1 mouse_genomes_project 5 139138323 139182689 - MGP_129S1SvImJ_P0074842 Eln protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074843.1 MGP_129S1SvImJ_G0030163.1 mouse_genomes_project 5 139161088 139164586 - Eln protein_coding retained_intron MGP_129S1SvImJ_T0074844.1 MGP_129S1SvImJ_G0030163.1 mouse_genomes_project 5 139180168 139182696 - Eln protein_coding retained_intron MGP_129S1SvImJ_T0070594.1 MGP_129S1SvImJ_G0029374.1 mouse_genomes_project 5 27140238 27288752 - MGP_129S1SvImJ_P0070594 Lmbr1 protein_coding protein_coding MGP_129S1SvImJ_T0070595.1 MGP_129S1SvImJ_G0029374.1 mouse_genomes_project 5 27140250 27288758 - MGP_129S1SvImJ_P0070595 Lmbr1 protein_coding protein_coding MGP_129S1SvImJ_T0070596.1 MGP_129S1SvImJ_G0029374.1 mouse_genomes_project 5 27142548 27288670 - MGP_129S1SvImJ_P0070596 Lmbr1 protein_coding protein_coding MGP_129S1SvImJ_T0070597.1 MGP_129S1SvImJ_G0029374.1 mouse_genomes_project 5 27142802 27288752 - MGP_129S1SvImJ_P0070597 Lmbr1 protein_coding protein_coding MGP_129S1SvImJ_T0070598.1 MGP_129S1SvImJ_G0029374.1 mouse_genomes_project 5 27143270 27288698 - MGP_129S1SvImJ_P0070598 Lmbr1 protein_coding protein_coding MGP_129S1SvImJ_T0070599.1 MGP_129S1SvImJ_G0029374.1 mouse_genomes_project 5 27145447 27209657 - MGP_129S1SvImJ_P0070599 Lmbr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070600.1 MGP_129S1SvImJ_G0029374.1 mouse_genomes_project 5 27173891 27273126 - Lmbr1 protein_coding processed_transcript MGP_129S1SvImJ_T0008253.1 MGP_129S1SvImJ_G0006728.1 mouse_genomes_project 5 106205599 106235781 + D930016D06Rik lincRNA lincRNA MGP_129S1SvImJ_T0008254.1 MGP_129S1SvImJ_G0006728.1 mouse_genomes_project 5 106205733 106220081 + D930016D06Rik lincRNA lincRNA MGP_129S1SvImJ_T0008255.1 MGP_129S1SvImJ_G0006728.1 mouse_genomes_project 5 106222225 106233652 + D930016D06Rik lincRNA lincRNA MGP_129S1SvImJ_T0008256.1 MGP_129S1SvImJ_G0006728.1 mouse_genomes_project 5 106222775 106233059 + D930016D06Rik lincRNA lincRNA MGP_129S1SvImJ_T0008257.1 MGP_129S1SvImJ_G0006728.1 mouse_genomes_project 5 106222817 106235077 + D930016D06Rik lincRNA lincRNA MGP_129S1SvImJ_T0014927.1 MGP_129S1SvImJ_G0013016.1 mouse_genomes_project 5 23179722 23180000 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004685.1 MGP_129S1SvImJ_G0004061.1 mouse_genomes_project 5 33291418 33292994 - Gm43791 antisense antisense MGP_129S1SvImJ_T0001838.1 MGP_129S1SvImJ_G0001753.1 mouse_genomes_project 5 127137230 127139347 + TEC TEC MGP_129S1SvImJ_T0071322.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34826682 34915675 - MGP_129S1SvImJ_P0071322 Tbc1d14 protein_coding protein_coding MGP_129S1SvImJ_T0071323.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34826682 34923747 - MGP_129S1SvImJ_P0071323 Tbc1d14 protein_coding protein_coding MGP_129S1SvImJ_T0071324.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34826682 34923153 - MGP_129S1SvImJ_P0071324 Tbc1d14 protein_coding protein_coding MGP_129S1SvImJ_T0071325.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34826683 34870834 - MGP_129S1SvImJ_P0071325 Tbc1d14 protein_coding protein_coding MGP_129S1SvImJ_T0071326.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34826686 34923142 - MGP_129S1SvImJ_P0071326 Tbc1d14 protein_coding protein_coding MGP_129S1SvImJ_T0071327.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34826686 34871813 - MGP_129S1SvImJ_P0071327 Tbc1d14 protein_coding protein_coding MGP_129S1SvImJ_T0071328.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34828699 34846365 - MGP_129S1SvImJ_P0071328 Tbc1d14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071329.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34828817 34927615 - MGP_129S1SvImJ_P0071329 Tbc1d14 protein_coding protein_coding MGP_129S1SvImJ_T0071330.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34828819 34927607 - MGP_129S1SvImJ_P0071330 Tbc1d14 protein_coding protein_coding MGP_129S1SvImJ_T0071331.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34828824 34829496 - Tbc1d14 protein_coding processed_transcript MGP_129S1SvImJ_T0071332.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34829024 34912895 - MGP_129S1SvImJ_P0071332 Tbc1d14 protein_coding protein_coding MGP_129S1SvImJ_T0071333.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34829092 34870759 - MGP_129S1SvImJ_P0071333 Tbc1d14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071334.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34831243 34859185 - Tbc1d14 protein_coding retained_intron MGP_129S1SvImJ_T0071335.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34857995 34870730 - MGP_129S1SvImJ_P0071335 Tbc1d14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071336.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34863638 34870718 - Tbc1d14 protein_coding processed_transcript MGP_129S1SvImJ_T0071337.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34882660 34923740 - Tbc1d14 protein_coding retained_intron MGP_129S1SvImJ_T0071338.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34884547 34905397 - Tbc1d14 protein_coding processed_transcript MGP_129S1SvImJ_T0071339.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34884609 34914845 - MGP_129S1SvImJ_P0071339 Tbc1d14 protein_coding protein_coding MGP_129S1SvImJ_T0071340.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34912530 34927574 - Tbc1d14 protein_coding retained_intron MGP_129S1SvImJ_T0071341.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34912894 34927574 - MGP_129S1SvImJ_P0071341 Tbc1d14 protein_coding protein_coding MGP_129S1SvImJ_T0071342.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34912943 34914616 - MGP_129S1SvImJ_P0071342 Tbc1d14 protein_coding protein_coding MGP_129S1SvImJ_T0071343.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34913138 34936973 - MGP_129S1SvImJ_P0071343 Tbc1d14 protein_coding protein_coding MGP_129S1SvImJ_T0071344.1 MGP_129S1SvImJ_G0029491.1 mouse_genomes_project 5 34913366 34936998 - MGP_129S1SvImJ_P0071344 Tbc1d14 protein_coding protein_coding MGP_129S1SvImJ_T0071307.1 MGP_129S1SvImJ_G0029485.1 mouse_genomes_project 5 34204148 34320113 + MGP_129S1SvImJ_P0071307 Afap1 protein_coding protein_coding MGP_129S1SvImJ_T0071308.1 MGP_129S1SvImJ_G0029485.1 mouse_genomes_project 5 34204249 34320070 + MGP_129S1SvImJ_P0071308 Afap1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0071309.1 MGP_129S1SvImJ_G0029485.1 mouse_genomes_project 5 34204294 34218526 + Afap1 protein_coding processed_transcript MGP_129S1SvImJ_T0071310.1 MGP_129S1SvImJ_G0029485.1 mouse_genomes_project 5 34225914 34312201 + MGP_129S1SvImJ_P0071310 Afap1 protein_coding protein_coding MGP_129S1SvImJ_T0071311.1 MGP_129S1SvImJ_G0029485.1 mouse_genomes_project 5 34303301 34307523 + Afap1 protein_coding retained_intron MGP_129S1SvImJ_T0001600.1 MGP_129S1SvImJ_G0001517.1 mouse_genomes_project 5 48258677 48261704 - TEC TEC MGP_129S1SvImJ_T0070939.1 MGP_129S1SvImJ_G0029430.1 mouse_genomes_project 5 29626971 29688988 + protein_coding processed_transcript MGP_129S1SvImJ_T0070940.1 MGP_129S1SvImJ_G0029430.1 mouse_genomes_project 5 29644728 29675814 + protein_coding processed_transcript MGP_129S1SvImJ_T0070941.1 MGP_129S1SvImJ_G0029430.1 mouse_genomes_project 5 29644744 29688988 + protein_coding processed_transcript MGP_129S1SvImJ_T0070942.1 MGP_129S1SvImJ_G0029430.1 mouse_genomes_project 5 29644757 29698506 + MGP_129S1SvImJ_P0070942 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070943.1 MGP_129S1SvImJ_G0029430.1 mouse_genomes_project 5 29644791 29647278 + protein_coding retained_intron MGP_129S1SvImJ_T0070946.1 MGP_129S1SvImJ_G0029430.1 mouse_genomes_project 5 29688751 29692259 + protein_coding processed_transcript MGP_129S1SvImJ_T0070947.1 MGP_129S1SvImJ_G0029430.1 mouse_genomes_project 5 29689622 29697553 + protein_coding processed_transcript MGP_129S1SvImJ_T0010755.1 MGP_129S1SvImJ_G0008871.1 mouse_genomes_project 5 146168557 146168636 + Gm44385 miRNA miRNA MGP_129S1SvImJ_T0075498.1 MGP_129S1SvImJ_G0030290.1 mouse_genomes_project 5 144809488 144820602 + MGP_129S1SvImJ_P0075498 Mafk protein_coding protein_coding MGP_129S1SvImJ_T0075499.1 MGP_129S1SvImJ_G0030290.1 mouse_genomes_project 5 144809509 144817447 + Mafk protein_coding processed_transcript MGP_129S1SvImJ_T0075500.1 MGP_129S1SvImJ_G0030290.1 mouse_genomes_project 5 144815452 144820278 + MGP_129S1SvImJ_P0075500 Mafk protein_coding protein_coding MGP_129S1SvImJ_T0075198.1 MGP_129S1SvImJ_G0030232.1 mouse_genomes_project 5 142340415 142358439 + MGP_129S1SvImJ_P0075198 Tfr2 protein_coding protein_coding MGP_129S1SvImJ_T0075199.1 MGP_129S1SvImJ_G0030232.1 mouse_genomes_project 5 142340426 142358441 + MGP_129S1SvImJ_P0075199 Tfr2 protein_coding protein_coding MGP_129S1SvImJ_T0075200.1 MGP_129S1SvImJ_G0030232.1 mouse_genomes_project 5 142340439 142341946 + Tfr2 protein_coding retained_intron MGP_129S1SvImJ_T0075201.1 MGP_129S1SvImJ_G0030232.1 mouse_genomes_project 5 142340444 142358439 + MGP_129S1SvImJ_P0075201 Tfr2 protein_coding protein_coding MGP_129S1SvImJ_T0075202.1 MGP_129S1SvImJ_G0030232.1 mouse_genomes_project 5 142341303 142358425 + MGP_129S1SvImJ_P0075202 Tfr2 protein_coding protein_coding MGP_129S1SvImJ_T0075203.1 MGP_129S1SvImJ_G0030232.1 mouse_genomes_project 5 142341388 142358436 + MGP_129S1SvImJ_P0075203 Tfr2 protein_coding protein_coding MGP_129S1SvImJ_T0075204.1 MGP_129S1SvImJ_G0030232.1 mouse_genomes_project 5 142342034 142345001 + Tfr2 protein_coding retained_intron MGP_129S1SvImJ_T0075205.1 MGP_129S1SvImJ_G0030232.1 mouse_genomes_project 5 142345093 142348803 + Tfr2 protein_coding retained_intron MGP_129S1SvImJ_T0075206.1 MGP_129S1SvImJ_G0030232.1 mouse_genomes_project 5 142349893 142351833 + MGP_129S1SvImJ_P0075206 Tfr2 protein_coding protein_coding MGP_129S1SvImJ_T0075207.1 MGP_129S1SvImJ_G0030232.1 mouse_genomes_project 5 142354215 142357949 + Tfr2 protein_coding retained_intron MGP_129S1SvImJ_T0075208.1 MGP_129S1SvImJ_G0030232.1 mouse_genomes_project 5 142354215 142355040 + Tfr2 protein_coding retained_intron MGP_129S1SvImJ_T0073189.1 MGP_129S1SvImJ_G0029864.1 mouse_genomes_project 5 110826877 110838027 + MGP_129S1SvImJ_P0073189 Fgfrl1 protein_coding protein_coding MGP_129S1SvImJ_T0073190.1 MGP_129S1SvImJ_G0029864.1 mouse_genomes_project 5 110828725 110837830 + MGP_129S1SvImJ_P0073190 Fgfrl1 protein_coding protein_coding MGP_129S1SvImJ_T0073191.1 MGP_129S1SvImJ_G0029864.1 mouse_genomes_project 5 110828763 110841415 + MGP_129S1SvImJ_P0073191 Fgfrl1 protein_coding protein_coding MGP_129S1SvImJ_T0073192.1 MGP_129S1SvImJ_G0029864.1 mouse_genomes_project 5 110828997 110841387 + MGP_129S1SvImJ_P0073192 Fgfrl1 protein_coding protein_coding MGP_129S1SvImJ_T0073193.1 MGP_129S1SvImJ_G0029864.1 mouse_genomes_project 5 110839564 110840363 + Fgfrl1 protein_coding retained_intron MGP_129S1SvImJ_T0071164.1 MGP_129S1SvImJ_G0029466.1 mouse_genomes_project 5 32769550 32795389 + MGP_129S1SvImJ_P0071164 Sh3bp2 protein_coding protein_coding MGP_129S1SvImJ_T0071165.1 MGP_129S1SvImJ_G0029466.1 mouse_genomes_project 5 32769558 32807330 + MGP_129S1SvImJ_P0071165 Sh3bp2 protein_coding protein_coding MGP_129S1SvImJ_T0071166.1 MGP_129S1SvImJ_G0029466.1 mouse_genomes_project 5 32787077 32801410 + Sh3bp2 protein_coding retained_intron MGP_129S1SvImJ_T0071167.1 MGP_129S1SvImJ_G0029466.1 mouse_genomes_project 5 32787077 32796435 + MGP_129S1SvImJ_P0071167 Sh3bp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071168.1 MGP_129S1SvImJ_G0029466.1 mouse_genomes_project 5 32787077 32807314 + MGP_129S1SvImJ_P0071168 Sh3bp2 protein_coding protein_coding MGP_129S1SvImJ_T0071169.1 MGP_129S1SvImJ_G0029466.1 mouse_genomes_project 5 32793288 32807314 + MGP_129S1SvImJ_P0071169 Sh3bp2 protein_coding protein_coding MGP_129S1SvImJ_T0071170.1 MGP_129S1SvImJ_G0029466.1 mouse_genomes_project 5 32793400 32807327 + MGP_129S1SvImJ_P0071170 Sh3bp2 protein_coding protein_coding MGP_129S1SvImJ_T0071171.1 MGP_129S1SvImJ_G0029466.1 mouse_genomes_project 5 32795233 32796481 + Sh3bp2 protein_coding retained_intron MGP_129S1SvImJ_T0001648.1 MGP_129S1SvImJ_G0001564.1 mouse_genomes_project 5 64582740 64585039 + TEC TEC MGP_129S1SvImJ_T0008182.1 MGP_129S1SvImJ_G0006671.1 mouse_genomes_project 5 75228587 75267272 + Gm19583 lincRNA lincRNA MGP_129S1SvImJ_T0008177.1 MGP_129S1SvImJ_G0006667.1 mouse_genomes_project 5 74154571 74156924 + Dancr lincRNA lincRNA MGP_129S1SvImJ_T0008178.1 MGP_129S1SvImJ_G0006667.1 mouse_genomes_project 5 74154571 74156925 + Dancr lincRNA lincRNA MGP_129S1SvImJ_T0001906.1 MGP_129S1SvImJ_G0001819.1 mouse_genomes_project 5 140994503 140998851 - TEC TEC MGP_129S1SvImJ_T0070279.1 MGP_129S1SvImJ_G0029311.1 mouse_genomes_project 5 18397069 18401749 + MGP_129S1SvImJ_P0070279 Tmem60 protein_coding protein_coding MGP_129S1SvImJ_T0070280.1 MGP_129S1SvImJ_G0029311.1 mouse_genomes_project 5 18397385 18399563 + Tmem60 protein_coding processed_transcript MGP_129S1SvImJ_T0015218.1 MGP_129S1SvImJ_G0013307.1 mouse_genomes_project 5 149596519 149596657 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070200.1 MGP_129S1SvImJ_G0029293.1 mouse_genomes_project 5 6517960 6776642 - MGP_129S1SvImJ_P0070200 Grm3 protein_coding protein_coding MGP_129S1SvImJ_T0102565.1 MGP_129S1SvImJ_G0040398.1 mouse_genomes_project 5 87969645 87973353 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0072384.1 MGP_129S1SvImJ_G0029673.1 mouse_genomes_project 5 87551599 87593155 - MGP_129S1SvImJ_P0072384 Tmprss11e protein_coding protein_coding MGP_129S1SvImJ_T0098959.1 MGP_129S1SvImJ_G0037037.1 mouse_genomes_project 5 102332455 102332879 - Gm43514 sense_intronic sense_intronic MGP_129S1SvImJ_T0001920.1 MGP_129S1SvImJ_G0001833.1 mouse_genomes_project 5 148860000 148861089 + TEC TEC MGP_129S1SvImJ_T0072395.1 MGP_129S1SvImJ_G0029675.1 mouse_genomes_project 5 87735977 87760383 - MGP_129S1SvImJ_P0072395 Ugt2b34 protein_coding protein_coding MGP_129S1SvImJ_T0072396.1 MGP_129S1SvImJ_G0029675.1 mouse_genomes_project 5 87735977 87760383 - MGP_129S1SvImJ_P0072396 Ugt2b34 protein_coding protein_coding MGP_129S1SvImJ_T0001660.1 MGP_129S1SvImJ_G0001576.1 mouse_genomes_project 5 65352808 65355354 - TEC TEC MGP_129S1SvImJ_T0008205.1 MGP_129S1SvImJ_G0006689.1 mouse_genomes_project 5 87615549 87633346 - Gm43057 lincRNA lincRNA MGP_129S1SvImJ_T0015168.1 MGP_129S1SvImJ_G0013257.1 mouse_genomes_project 5 125025164 125025497 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010706.1 MGP_129S1SvImJ_G0008822.1 mouse_genomes_project 5 69188303 69188409 + Gm24368 miRNA miRNA MGP_129S1SvImJ_T0075180.1 MGP_129S1SvImJ_G0030230.1 mouse_genomes_project 5 142293821 142299785 - MGP_129S1SvImJ_P0075180 Gnb2 protein_coding protein_coding MGP_129S1SvImJ_T0075181.1 MGP_129S1SvImJ_G0030230.1 mouse_genomes_project 5 142293823 142294616 - Gnb2 protein_coding retained_intron MGP_129S1SvImJ_T0075182.1 MGP_129S1SvImJ_G0030230.1 mouse_genomes_project 5 142293852 142299842 - MGP_129S1SvImJ_P0075182 Gnb2 protein_coding protein_coding MGP_129S1SvImJ_T0075183.1 MGP_129S1SvImJ_G0030230.1 mouse_genomes_project 5 142294198 142301266 - MGP_129S1SvImJ_P0075183 Gnb2 protein_coding protein_coding MGP_129S1SvImJ_T0075184.1 MGP_129S1SvImJ_G0030230.1 mouse_genomes_project 5 142294260 142296595 - Gnb2 protein_coding retained_intron MGP_129S1SvImJ_T0075185.1 MGP_129S1SvImJ_G0030230.1 mouse_genomes_project 5 142294467 142295558 - Gnb2 protein_coding retained_intron MGP_129S1SvImJ_T0075186.1 MGP_129S1SvImJ_G0030230.1 mouse_genomes_project 5 142294491 142295516 - Gnb2 protein_coding retained_intron MGP_129S1SvImJ_T0075187.1 MGP_129S1SvImJ_G0030230.1 mouse_genomes_project 5 142294568 142295472 - Gnb2 protein_coding retained_intron MGP_129S1SvImJ_T0075188.1 MGP_129S1SvImJ_G0030230.1 mouse_genomes_project 5 142294715 142296734 - MGP_129S1SvImJ_P0075188 Gnb2 protein_coding protein_coding MGP_129S1SvImJ_T0075189.1 MGP_129S1SvImJ_G0030230.1 mouse_genomes_project 5 142294833 142300036 - MGP_129S1SvImJ_P0075189 Gnb2 protein_coding protein_coding MGP_129S1SvImJ_T0102581.1 MGP_129S1SvImJ_G0040414.1 mouse_genomes_project 5 145531088 145556953 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0001663.1 MGP_129S1SvImJ_G0001579.1 mouse_genomes_project 5 65555727 65556641 + TEC TEC MGP_129S1SvImJ_T0073496.1 MGP_129S1SvImJ_G0029930.1 mouse_genomes_project 5 116777872 116800637 + Usp30 protein_coding processed_transcript MGP_129S1SvImJ_T0073497.1 MGP_129S1SvImJ_G0029930.1 mouse_genomes_project 5 116777925 116816787 + MGP_129S1SvImJ_P0073497 Usp30 protein_coding protein_coding MGP_129S1SvImJ_T0073498.1 MGP_129S1SvImJ_G0029930.1 mouse_genomes_project 5 116778161 116798148 + Usp30 protein_coding processed_transcript MGP_129S1SvImJ_T0073499.1 MGP_129S1SvImJ_G0029930.1 mouse_genomes_project 5 116811250 116838118 + MGP_129S1SvImJ_P0073499 Usp30 protein_coding protein_coding MGP_129S1SvImJ_T0073500.1 MGP_129S1SvImJ_G0029930.1 mouse_genomes_project 5 116811295 116834494 + MGP_129S1SvImJ_P0073500 Usp30 protein_coding protein_coding MGP_129S1SvImJ_T0073501.1 MGP_129S1SvImJ_G0029930.1 mouse_genomes_project 5 116811368 116836908 + MGP_129S1SvImJ_P0073501 Usp30 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0073502.1 MGP_129S1SvImJ_G0029930.1 mouse_genomes_project 5 116814647 116823256 + Usp30 protein_coding retained_intron MGP_129S1SvImJ_T0073503.1 MGP_129S1SvImJ_G0029930.1 mouse_genomes_project 5 116822065 116822585 + Usp30 protein_coding retained_intron MGP_129S1SvImJ_T0011634.1 MGP_129S1SvImJ_G0009750.1 mouse_genomes_project 5 144280337 144280614 + Gm27316 misc_RNA misc_RNA MGP_129S1SvImJ_T0074502.1 MGP_129S1SvImJ_G0030107.1 mouse_genomes_project 5 128809132 128818430 + MGP_129S1SvImJ_P0074502 Fam101a protein_coding protein_coding MGP_129S1SvImJ_T0074503.1 MGP_129S1SvImJ_G0030107.1 mouse_genomes_project 5 128809386 128818429 + MGP_129S1SvImJ_P0074503 Fam101a protein_coding protein_coding MGP_129S1SvImJ_T0074504.1 MGP_129S1SvImJ_G0030107.1 mouse_genomes_project 5 128815993 128817373 + Fam101a protein_coding processed_transcript MGP_129S1SvImJ_T0008252.1 MGP_129S1SvImJ_G0006727.1 mouse_genomes_project 5 105919899 105927289 - Gm42792 lincRNA lincRNA MGP_129S1SvImJ_T0015099.1 MGP_129S1SvImJ_G0013188.1 mouse_genomes_project 5 99826791 99827172 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015068.1 MGP_129S1SvImJ_G0013157.1 mouse_genomes_project 5 85393368 85394485 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102029.1 MGP_129S1SvImJ_G0039871.1 mouse_genomes_project 5 93095524 93100711 + unitary_pseudogene retained_intron MGP_129S1SvImJ_T0102030.1 MGP_129S1SvImJ_G0039871.1 mouse_genomes_project 5 93096025 93103764 + unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0102031.1 MGP_129S1SvImJ_G0039871.1 mouse_genomes_project 5 93096039 93104683 + unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0102032.1 MGP_129S1SvImJ_G0039871.1 mouse_genomes_project 5 93096468 93122049 + unitary_pseudogene unitary_pseudogene MGP_129S1SvImJ_T0018167.1 MGP_129S1SvImJ_G0015594.1 mouse_genomes_project 5 29626974 29737518 + Gm43809 processed_transcript processed_transcript MGP_129S1SvImJ_T0018168.1 MGP_129S1SvImJ_G0015594.1 mouse_genomes_project 5 29644744 29737498 + Gm43809 processed_transcript processed_transcript MGP_129S1SvImJ_T0075310.1 MGP_129S1SvImJ_G0030255.1 mouse_genomes_project 5 142934912 142950044 - MGP_129S1SvImJ_P0075310 Zfp113 protein_coding protein_coding MGP_129S1SvImJ_T0075311.1 MGP_129S1SvImJ_G0030255.1 mouse_genomes_project 5 142939872 142947199 - MGP_129S1SvImJ_P0075311 Zfp113 protein_coding protein_coding MGP_129S1SvImJ_T0075312.1 MGP_129S1SvImJ_G0030255.1 mouse_genomes_project 5 142944815 142950000 - Zfp113 protein_coding retained_intron MGP_129S1SvImJ_T0075313.1 MGP_129S1SvImJ_G0030255.1 mouse_genomes_project 5 142945223 142950004 - MGP_129S1SvImJ_P0075313 Zfp113 protein_coding protein_coding MGP_129S1SvImJ_T0075860.1 MGP_129S1SvImJ_G0030370.1 mouse_genomes_project 5 151307645 151351610 - MGP_129S1SvImJ_P0075860 protein_coding protein_coding MGP_129S1SvImJ_T0072955.1 MGP_129S1SvImJ_G0029815.1 mouse_genomes_project 5 106134980 106183840 + MGP_129S1SvImJ_P0072955 Pkd2 protein_coding protein_coding MGP_129S1SvImJ_T0072956.1 MGP_129S1SvImJ_G0029815.1 mouse_genomes_project 5 106135100 106167128 + Pkd2 protein_coding processed_transcript MGP_129S1SvImJ_T0072957.1 MGP_129S1SvImJ_G0029815.1 mouse_genomes_project 5 106169578 106179429 + Pkd2 protein_coding retained_intron MGP_129S1SvImJ_T0071388.1 MGP_129S1SvImJ_G0029500.1 mouse_genomes_project 5 35651569 35690615 - MGP_129S1SvImJ_P0071388 Evc protein_coding protein_coding MGP_129S1SvImJ_T0071389.1 MGP_129S1SvImJ_G0029500.1 mouse_genomes_project 5 35652126 35661033 - MGP_129S1SvImJ_P0071389 Evc protein_coding protein_coding MGP_129S1SvImJ_T0071390.1 MGP_129S1SvImJ_G0029500.1 mouse_genomes_project 5 35652843 35666186 - Evc protein_coding retained_intron MGP_129S1SvImJ_T0071391.1 MGP_129S1SvImJ_G0029500.1 mouse_genomes_project 5 35652888 35654018 - MGP_129S1SvImJ_P0071391 Evc protein_coding protein_coding MGP_129S1SvImJ_T0071392.1 MGP_129S1SvImJ_G0029500.1 mouse_genomes_project 5 35667090 35690688 - MGP_129S1SvImJ_P0071392 Evc protein_coding protein_coding MGP_129S1SvImJ_T0071393.1 MGP_129S1SvImJ_G0029500.1 mouse_genomes_project 5 35668386 35672194 - Evc protein_coding retained_intron MGP_129S1SvImJ_T0071394.1 MGP_129S1SvImJ_G0029500.1 mouse_genomes_project 5 35670037 35672313 - Evc protein_coding retained_intron MGP_129S1SvImJ_T0071395.1 MGP_129S1SvImJ_G0029500.1 mouse_genomes_project 5 35673012 35690700 - Evc protein_coding retained_intron MGP_129S1SvImJ_T0014890.1 MGP_129S1SvImJ_G0012979.1 mouse_genomes_project 5 14360724 14360977 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001652.1 MGP_129S1SvImJ_G0001568.1 mouse_genomes_project 5 65067248 65068723 - TEC TEC MGP_129S1SvImJ_T0073093.1 MGP_129S1SvImJ_G0029847.1 mouse_genomes_project 5 109959778 109963331 + Rpl5 protein_coding retained_intron MGP_129S1SvImJ_T0073094.1 MGP_129S1SvImJ_G0029847.1 mouse_genomes_project 5 109959851 109967189 + MGP_129S1SvImJ_P0073094 Rpl5 protein_coding protein_coding MGP_129S1SvImJ_T0073095.1 MGP_129S1SvImJ_G0029847.1 mouse_genomes_project 5 109961327 109963093 + Rpl5 protein_coding retained_intron MGP_129S1SvImJ_T0073096.1 MGP_129S1SvImJ_G0029847.1 mouse_genomes_project 5 109963321 109967243 + Rpl5 protein_coding retained_intron MGP_129S1SvImJ_T0073097.1 MGP_129S1SvImJ_G0029847.1 mouse_genomes_project 5 109965814 109967248 + Rpl5 protein_coding retained_intron MGP_129S1SvImJ_T0001703.1 MGP_129S1SvImJ_G0001619.1 mouse_genomes_project 5 72876295 72878651 - TEC TEC MGP_129S1SvImJ_T0001704.1 MGP_129S1SvImJ_G0001619.1 mouse_genomes_project 5 72878004 72878651 - TEC pseudogene MGP_129S1SvImJ_T0072373.1 MGP_129S1SvImJ_G0029668.1 mouse_genomes_project 5 87142664 87167918 - MGP_129S1SvImJ_P0072373 Tmprss11d protein_coding protein_coding MGP_129S1SvImJ_T0072374.1 MGP_129S1SvImJ_G0029668.1 mouse_genomes_project 5 87142664 87214536 - MGP_129S1SvImJ_P0072374 Tmprss11d protein_coding protein_coding MGP_129S1SvImJ_T0001680.1 MGP_129S1SvImJ_G0001596.1 mouse_genomes_project 5 66675278 66677981 + TEC TEC MGP_129S1SvImJ_T0074916.1 MGP_129S1SvImJ_G0030179.1 mouse_genomes_project 5 139812635 139871599 - MGP_129S1SvImJ_P0074916 Fkbp6 protein_coding protein_coding MGP_129S1SvImJ_T0074917.1 MGP_129S1SvImJ_G0030179.1 mouse_genomes_project 5 139812635 139871569 - MGP_129S1SvImJ_P0074917 Fkbp6 protein_coding protein_coding MGP_129S1SvImJ_T0074918.1 MGP_129S1SvImJ_G0030179.1 mouse_genomes_project 5 139858924 139871430 - MGP_129S1SvImJ_P0074918 Fkbp6 protein_coding protein_coding MGP_129S1SvImJ_T0074919.1 MGP_129S1SvImJ_G0030179.1 mouse_genomes_project 5 139858924 139871598 - MGP_129S1SvImJ_P0074919 Fkbp6 protein_coding protein_coding MGP_129S1SvImJ_T0070507.1 MGP_129S1SvImJ_G0029354.1 mouse_genomes_project 5 22475838 22496110 - MGP_129S1SvImJ_P0070507 Wdr86 protein_coding protein_coding MGP_129S1SvImJ_T0070508.1 MGP_129S1SvImJ_G0029354.1 mouse_genomes_project 5 22476370 22496063 - Wdr86 protein_coding retained_intron MGP_129S1SvImJ_T0070509.1 MGP_129S1SvImJ_G0029354.1 mouse_genomes_project 5 22476374 22477483 - Wdr86 protein_coding retained_intron MGP_129S1SvImJ_T0070510.1 MGP_129S1SvImJ_G0029354.1 mouse_genomes_project 5 22476743 22479687 - MGP_129S1SvImJ_P0070510 Wdr86 protein_coding protein_coding MGP_129S1SvImJ_T0001907.1 MGP_129S1SvImJ_G0001820.1 mouse_genomes_project 5 141188031 141194913 - TEC TEC MGP_129S1SvImJ_T0018182.1 MGP_129S1SvImJ_G0015600.1 mouse_genomes_project 5 56854087 57009244 - 4932441J04Rik processed_transcript antisense MGP_129S1SvImJ_T0018183.1 MGP_129S1SvImJ_G0015600.1 mouse_genomes_project 5 57007463 57011525 - 4932441J04Rik processed_transcript retained_intron MGP_129S1SvImJ_T0014981.1 MGP_129S1SvImJ_G0013070.1 mouse_genomes_project 5 42579677 42580257 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072979.1 MGP_129S1SvImJ_G0029827.1 mouse_genomes_project 5 107604419 107726623 + MGP_129S1SvImJ_P0072979 Lrrc8d protein_coding protein_coding MGP_129S1SvImJ_T0072980.1 MGP_129S1SvImJ_G0029827.1 mouse_genomes_project 5 107605239 107726618 + MGP_129S1SvImJ_P0072980 Lrrc8d protein_coding protein_coding MGP_129S1SvImJ_T0072981.1 MGP_129S1SvImJ_G0029827.1 mouse_genomes_project 5 107605260 107633551 + Lrrc8d protein_coding retained_intron MGP_129S1SvImJ_T0072982.1 MGP_129S1SvImJ_G0029827.1 mouse_genomes_project 5 107605316 107633549 + Lrrc8d protein_coding processed_transcript MGP_129S1SvImJ_T0072983.1 MGP_129S1SvImJ_G0029827.1 mouse_genomes_project 5 107630699 107723245 + MGP_129S1SvImJ_P0072983 Lrrc8d protein_coding protein_coding MGP_129S1SvImJ_T0072984.1 MGP_129S1SvImJ_G0029827.1 mouse_genomes_project 5 107631094 107723256 + MGP_129S1SvImJ_P0072984 Lrrc8d protein_coding protein_coding MGP_129S1SvImJ_T0072985.1 MGP_129S1SvImJ_G0029827.1 mouse_genomes_project 5 107631300 107725047 + Lrrc8d protein_coding processed_transcript MGP_129S1SvImJ_T0072986.1 MGP_129S1SvImJ_G0029827.1 mouse_genomes_project 5 107631373 107723412 + MGP_129S1SvImJ_P0072986 Lrrc8d protein_coding protein_coding MGP_129S1SvImJ_T0072987.1 MGP_129S1SvImJ_G0029827.1 mouse_genomes_project 5 107631540 107748501 + Lrrc8d protein_coding processed_transcript MGP_129S1SvImJ_T0072988.1 MGP_129S1SvImJ_G0029827.1 mouse_genomes_project 5 107735789 107748500 + Lrrc8d protein_coding processed_transcript MGP_129S1SvImJ_T0014872.1 MGP_129S1SvImJ_G0012961.1 mouse_genomes_project 5 4886681 4886973 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001690.1 MGP_129S1SvImJ_G0001606.1 mouse_genomes_project 5 67872435 67874299 - TEC TEC MGP_129S1SvImJ_T0102562.1 MGP_129S1SvImJ_G0040395.1 mouse_genomes_project 5 87711769 87714619 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0070383.1 MGP_129S1SvImJ_G0029331.1 mouse_genomes_project 5 21421899 21468666 - MGP_129S1SvImJ_P0070383 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0070384.1 MGP_129S1SvImJ_G0029331.1 mouse_genomes_project 5 21422427 21430220 - protein_coding processed_transcript MGP_129S1SvImJ_T0070385.1 MGP_129S1SvImJ_G0029331.1 mouse_genomes_project 5 21423486 21444572 - MGP_129S1SvImJ_P0070385 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070386.1 MGP_129S1SvImJ_G0029331.1 mouse_genomes_project 5 21429485 21444609 - protein_coding processed_transcript MGP_129S1SvImJ_T0070387.1 MGP_129S1SvImJ_G0029331.1 mouse_genomes_project 5 21430621 21436201 - protein_coding processed_transcript MGP_129S1SvImJ_T0070388.1 MGP_129S1SvImJ_G0029331.1 mouse_genomes_project 5 21456369 21459295 - protein_coding retained_intron MGP_129S1SvImJ_T0015194.1 MGP_129S1SvImJ_G0013283.1 mouse_genomes_project 5 142391849 142392184 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070676.1 MGP_129S1SvImJ_G0029391.1 mouse_genomes_project 5 28425663 28496882 - MGP_129S1SvImJ_P0070676 Cib4 protein_coding protein_coding MGP_129S1SvImJ_T0075748.1 MGP_129S1SvImJ_G0030347.1 mouse_genomes_project 5 149518220 149550025 - MGP_129S1SvImJ_P0075748 Tecpr1 protein_coding protein_coding MGP_129S1SvImJ_T0075749.1 MGP_129S1SvImJ_G0030347.1 mouse_genomes_project 5 149519109 149549957 - Tecpr1 protein_coding retained_intron MGP_129S1SvImJ_T0075750.1 MGP_129S1SvImJ_G0030347.1 mouse_genomes_project 5 149519885 149521933 - Tecpr1 protein_coding retained_intron MGP_129S1SvImJ_T0075751.1 MGP_129S1SvImJ_G0030347.1 mouse_genomes_project 5 149519890 149522750 - Tecpr1 protein_coding retained_intron MGP_129S1SvImJ_T0075752.1 MGP_129S1SvImJ_G0030347.1 mouse_genomes_project 5 149522322 149523525 - Tecpr1 protein_coding retained_intron MGP_129S1SvImJ_T0075753.1 MGP_129S1SvImJ_G0030347.1 mouse_genomes_project 5 149524226 149527318 - Tecpr1 protein_coding retained_intron MGP_129S1SvImJ_T0075754.1 MGP_129S1SvImJ_G0030347.1 mouse_genomes_project 5 149533113 149534271 - Tecpr1 protein_coding processed_transcript MGP_129S1SvImJ_T0075755.1 MGP_129S1SvImJ_G0030347.1 mouse_genomes_project 5 149535075 149541254 - Tecpr1 protein_coding retained_intron MGP_129S1SvImJ_T0075756.1 MGP_129S1SvImJ_G0030347.1 mouse_genomes_project 5 149535097 149549962 - Tecpr1 protein_coding retained_intron MGP_129S1SvImJ_T0075757.1 MGP_129S1SvImJ_G0030347.1 mouse_genomes_project 5 149537800 149550016 - Tecpr1 protein_coding retained_intron MGP_129S1SvImJ_T0075758.1 MGP_129S1SvImJ_G0030347.1 mouse_genomes_project 5 149544738 149549968 - Tecpr1 protein_coding retained_intron MGP_129S1SvImJ_T0075759.1 MGP_129S1SvImJ_G0030347.1 mouse_genomes_project 5 149546801 149549933 - Tecpr1 protein_coding retained_intron MGP_129S1SvImJ_T0001884.1 MGP_129S1SvImJ_G0001798.1 mouse_genomes_project 5 136277585 136284910 - TEC TEC MGP_129S1SvImJ_T0001760.1 MGP_129S1SvImJ_G0001675.1 mouse_genomes_project 5 105714660 105717437 - TEC TEC MGP_129S1SvImJ_T0070786.1 MGP_129S1SvImJ_G0029408.1 mouse_genomes_project 5 29062330 29069547 - MGP_129S1SvImJ_P0070786 Slc30a3 protein_coding protein_coding MGP_129S1SvImJ_T0070787.1 MGP_129S1SvImJ_G0029408.1 mouse_genomes_project 5 29063615 29064548 - MGP_129S1SvImJ_P0070787 Slc30a3 protein_coding protein_coding MGP_129S1SvImJ_T0070788.1 MGP_129S1SvImJ_G0029408.1 mouse_genomes_project 5 29064973 29069659 - MGP_129S1SvImJ_P0070788 Slc30a3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070789.1 MGP_129S1SvImJ_G0029408.1 mouse_genomes_project 5 29065530 29070985 - MGP_129S1SvImJ_P0070789 Slc30a3 protein_coding protein_coding MGP_129S1SvImJ_T0070790.1 MGP_129S1SvImJ_G0029408.1 mouse_genomes_project 5 29065566 29090563 - MGP_129S1SvImJ_P0070790 Slc30a3 protein_coding protein_coding MGP_129S1SvImJ_T0015035.1 MGP_129S1SvImJ_G0013124.1 mouse_genomes_project 5 67227432 67227724 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010731.1 MGP_129S1SvImJ_G0008847.1 mouse_genomes_project 5 126328908 126329027 + Mir8115 miRNA miRNA MGP_129S1SvImJ_T0001584.1 MGP_129S1SvImJ_G0001502.1 mouse_genomes_project 5 47757233 47761026 - TEC TEC MGP_129S1SvImJ_T0001585.1 MGP_129S1SvImJ_G0001502.1 mouse_genomes_project 5 47760146 47760520 - TEC pseudogene MGP_129S1SvImJ_T0072021.1 MGP_129S1SvImJ_G0029607.1 mouse_genomes_project 5 71319522 71432994 - protein_coding processed_transcript MGP_129S1SvImJ_T0072022.1 MGP_129S1SvImJ_G0029607.1 mouse_genomes_project 5 71319677 71319909 - protein_coding transcribed_processed_pseudogene MGP_129S1SvImJ_T0070575.1 MGP_129S1SvImJ_G0029371.1 mouse_genomes_project 5 26227047 26262241 + MGP_129S1SvImJ_P0070575 Rbm33 protein_coding non_stop_decay MGP_129S1SvImJ_T0070576.1 MGP_129S1SvImJ_G0029371.1 mouse_genomes_project 5 26227103 26332602 + MGP_129S1SvImJ_P0070576 Rbm33 protein_coding protein_coding MGP_129S1SvImJ_T0070577.1 MGP_129S1SvImJ_G0029371.1 mouse_genomes_project 5 26227103 26329473 + MGP_129S1SvImJ_P0070577 Rbm33 protein_coding protein_coding MGP_129S1SvImJ_T0070578.1 MGP_129S1SvImJ_G0029371.1 mouse_genomes_project 5 26227128 26265121 + MGP_129S1SvImJ_P0070578 Rbm33 protein_coding protein_coding MGP_129S1SvImJ_T0070579.1 MGP_129S1SvImJ_G0029371.1 mouse_genomes_project 5 26306744 26327045 + MGP_129S1SvImJ_P0070579 Rbm33 protein_coding protein_coding MGP_129S1SvImJ_T0070580.1 MGP_129S1SvImJ_G0029371.1 mouse_genomes_project 5 26324028 26327397 + MGP_129S1SvImJ_P0070580 Rbm33 protein_coding protein_coding MGP_129S1SvImJ_T0001679.1 MGP_129S1SvImJ_G0001595.1 mouse_genomes_project 5 66466218 66467787 + TEC TEC MGP_129S1SvImJ_T0004665.1 MGP_129S1SvImJ_G0004044.1 mouse_genomes_project 5 22458966 22467606 - Gm26648 antisense antisense MGP_129S1SvImJ_T0070569.1 MGP_129S1SvImJ_G0029369.1 mouse_genomes_project 5 26073297 26079323 + MGP_129S1SvImJ_P0070569 En2 protein_coding protein_coding MGP_129S1SvImJ_T0071010.1 MGP_129S1SvImJ_G0029441.1 mouse_genomes_project 5 31267055 31330178 + MGP_129S1SvImJ_P0071010 Slc5a1 protein_coding protein_coding MGP_129S1SvImJ_T0102573.1 MGP_129S1SvImJ_G0040406.1 mouse_genomes_project 5 101676412 101834497 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0008234.1 MGP_129S1SvImJ_G0006714.1 mouse_genomes_project 5 101346342 101355577 + lincRNA lincRNA MGP_129S1SvImJ_T0075347.1 MGP_129S1SvImJ_G0030261.1 mouse_genomes_project 5 142990432 142991740 + MGP_129S1SvImJ_P0075347 Mblac1 protein_coding protein_coding MGP_129S1SvImJ_T0008105.1 MGP_129S1SvImJ_G0006613.1 mouse_genomes_project 5 34777462 34797803 - 2210406O10Rik lincRNA lincRNA MGP_129S1SvImJ_T0008106.1 MGP_129S1SvImJ_G0006613.1 mouse_genomes_project 5 34786057 34797794 - 2210406O10Rik lincRNA lincRNA MGP_129S1SvImJ_T0008107.1 MGP_129S1SvImJ_G0006613.1 mouse_genomes_project 5 34786891 34797793 - 2210406O10Rik lincRNA lincRNA MGP_129S1SvImJ_T0008108.1 MGP_129S1SvImJ_G0006613.1 mouse_genomes_project 5 34789508 34797835 - 2210406O10Rik lincRNA lincRNA MGP_129S1SvImJ_T0071107.1 MGP_129S1SvImJ_G0029456.1 mouse_genomes_project 5 32185836 32187417 + MGP_129S1SvImJ_P0071107 Gm1673 protein_coding protein_coding MGP_129S1SvImJ_T0071108.1 MGP_129S1SvImJ_G0029456.1 mouse_genomes_project 5 32185840 32187413 + Gm1673 protein_coding retained_intron MGP_129S1SvImJ_T0071109.1 MGP_129S1SvImJ_G0029456.1 mouse_genomes_project 5 32185873 32187413 + MGP_129S1SvImJ_P0071109 Gm1673 protein_coding protein_coding MGP_129S1SvImJ_T0071110.1 MGP_129S1SvImJ_G0029456.1 mouse_genomes_project 5 32185877 32187410 + MGP_129S1SvImJ_P0071110 Gm1673 protein_coding protein_coding MGP_129S1SvImJ_T0071111.1 MGP_129S1SvImJ_G0029456.1 mouse_genomes_project 5 32185913 32187414 + MGP_129S1SvImJ_P0071111 Gm1673 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071112.1 MGP_129S1SvImJ_G0029456.1 mouse_genomes_project 5 32185937 32187413 + MGP_129S1SvImJ_P0071112 Gm1673 protein_coding protein_coding MGP_129S1SvImJ_T0001796.1 MGP_129S1SvImJ_G0001711.1 mouse_genomes_project 5 117856429 117857744 + TEC TEC MGP_129S1SvImJ_T0070633.1 MGP_129S1SvImJ_G0029383.1 mouse_genomes_project 5 28088731 28101868 + MGP_129S1SvImJ_P0070633 Gareml protein_coding protein_coding MGP_129S1SvImJ_T0015038.1 MGP_129S1SvImJ_G0013127.1 mouse_genomes_project 5 69310209 69310801 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0074562.1 MGP_129S1SvImJ_G0030117.1 mouse_genomes_project 5 131587069 131656470 + Glt1d1 protein_coding retained_intron MGP_129S1SvImJ_T0074563.1 MGP_129S1SvImJ_G0030117.1 mouse_genomes_project 5 131587069 131680565 + MGP_129S1SvImJ_P0074563 Glt1d1 protein_coding protein_coding MGP_129S1SvImJ_T0074564.1 MGP_129S1SvImJ_G0030117.1 mouse_genomes_project 5 131611418 131654436 + Glt1d1 protein_coding retained_intron MGP_129S1SvImJ_T0004833.1 MGP_129S1SvImJ_G0004166.1 mouse_genomes_project 5 124185795 124217992 + Gm43069 antisense antisense MGP_129S1SvImJ_T0015018.1 MGP_129S1SvImJ_G0013107.1 mouse_genomes_project 5 60829422 60830260 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070054.1 MGP_129S1SvImJ_G0029272.1 mouse_genomes_project 5 2399140 2425901 - Cldn12 protein_coding processed_transcript MGP_129S1SvImJ_T0070055.1 MGP_129S1SvImJ_G0029272.1 mouse_genomes_project 5 2415451 2425778 - MGP_129S1SvImJ_P0070055 Cldn12 protein_coding protein_coding MGP_129S1SvImJ_T0070056.1 MGP_129S1SvImJ_G0029272.1 mouse_genomes_project 5 2415545 2425862 - MGP_129S1SvImJ_P0070056 Cldn12 protein_coding protein_coding MGP_129S1SvImJ_T0070057.1 MGP_129S1SvImJ_G0029272.1 mouse_genomes_project 5 2415547 2425814 - MGP_129S1SvImJ_P0070057 Cldn12 protein_coding protein_coding MGP_129S1SvImJ_T0070058.1 MGP_129S1SvImJ_G0029272.1 mouse_genomes_project 5 2415659 2425719 - MGP_129S1SvImJ_P0070058 Cldn12 protein_coding protein_coding MGP_129S1SvImJ_T0070059.1 MGP_129S1SvImJ_G0029272.1 mouse_genomes_project 5 2418844 2425778 - MGP_129S1SvImJ_P0070059 Cldn12 protein_coding protein_coding MGP_129S1SvImJ_T0070060.1 MGP_129S1SvImJ_G0029272.1 mouse_genomes_project 5 2422082 2425947 - Cldn12 protein_coding processed_transcript MGP_129S1SvImJ_T0070061.1 MGP_129S1SvImJ_G0029272.1 mouse_genomes_project 5 2424210 2425435 - Cldn12 protein_coding processed_transcript MGP_129S1SvImJ_T0015037.1 MGP_129S1SvImJ_G0013126.1 mouse_genomes_project 5 68078871 68079196 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001723.1 MGP_129S1SvImJ_G0001638.1 mouse_genomes_project 5 76469534 76473710 - TEC TEC MGP_129S1SvImJ_T0014951.1 MGP_129S1SvImJ_G0013040.1 mouse_genomes_project 5 30394438 30394627 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073160.1 MGP_129S1SvImJ_G0029860.1 mouse_genomes_project 5 110759006 110774039 + MGP_129S1SvImJ_P0073160 Tmem175 protein_coding protein_coding MGP_129S1SvImJ_T0073161.1 MGP_129S1SvImJ_G0029860.1 mouse_genomes_project 5 110759068 110778788 + MGP_129S1SvImJ_P0073161 Tmem175 protein_coding protein_coding MGP_129S1SvImJ_T0073162.1 MGP_129S1SvImJ_G0029860.1 mouse_genomes_project 5 110759238 110777268 + MGP_129S1SvImJ_P0073162 Tmem175 protein_coding protein_coding MGP_129S1SvImJ_T0073163.1 MGP_129S1SvImJ_G0029860.1 mouse_genomes_project 5 110759245 110776676 + MGP_129S1SvImJ_P0073163 Tmem175 protein_coding protein_coding MGP_129S1SvImJ_T0073164.1 MGP_129S1SvImJ_G0029860.1 mouse_genomes_project 5 110771691 110773207 + Tmem175 protein_coding retained_intron MGP_129S1SvImJ_T0073165.1 MGP_129S1SvImJ_G0029860.1 mouse_genomes_project 5 110774333 110775125 + Tmem175 protein_coding processed_transcript MGP_129S1SvImJ_T0001839.1 MGP_129S1SvImJ_G0001754.1 mouse_genomes_project 5 127141014 127143000 + TEC TEC MGP_129S1SvImJ_T0001552.1 MGP_129S1SvImJ_G0001470.1 mouse_genomes_project 5 42855245 42858702 - TEC TEC MGP_129S1SvImJ_T0015205.1 MGP_129S1SvImJ_G0013294.1 mouse_genomes_project 5 144224123 144225954 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015183.1 MGP_129S1SvImJ_G0013272.1 mouse_genomes_project 5 138871649 138871859 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0074404.1 MGP_129S1SvImJ_G0030091.1 mouse_genomes_project 5 128049249 128131105 - MGP_129S1SvImJ_P0074404 Mphosph9 protein_coding protein_coding MGP_129S1SvImJ_T0074405.1 MGP_129S1SvImJ_G0030091.1 mouse_genomes_project 5 128050960 128130982 - MGP_129S1SvImJ_P0074405 Mphosph9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074406.1 MGP_129S1SvImJ_G0030091.1 mouse_genomes_project 5 128051958 128130985 - MGP_129S1SvImJ_P0074406 Mphosph9 protein_coding protein_coding MGP_129S1SvImJ_T0074407.1 MGP_129S1SvImJ_G0030091.1 mouse_genomes_project 5 128052908 128059394 - Mphosph9 protein_coding processed_transcript MGP_129S1SvImJ_T0074408.1 MGP_129S1SvImJ_G0030091.1 mouse_genomes_project 5 128057283 128063616 - Mphosph9 protein_coding processed_transcript MGP_129S1SvImJ_T0074409.1 MGP_129S1SvImJ_G0030091.1 mouse_genomes_project 5 128059230 128061309 - Mphosph9 protein_coding processed_transcript MGP_129S1SvImJ_T0074410.1 MGP_129S1SvImJ_G0030091.1 mouse_genomes_project 5 128060241 128061680 - Mphosph9 protein_coding retained_intron MGP_129S1SvImJ_T0074411.1 MGP_129S1SvImJ_G0030091.1 mouse_genomes_project 5 128090768 128131003 - MGP_129S1SvImJ_P0074411 Mphosph9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074412.1 MGP_129S1SvImJ_G0030091.1 mouse_genomes_project 5 128100917 128128261 - MGP_129S1SvImJ_P0074412 Mphosph9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074413.1 MGP_129S1SvImJ_G0030091.1 mouse_genomes_project 5 128118357 128131105 - Mphosph9 protein_coding processed_transcript MGP_129S1SvImJ_T0074414.1 MGP_129S1SvImJ_G0030091.1 mouse_genomes_project 5 128118357 128130985 - Mphosph9 protein_coding processed_transcript MGP_129S1SvImJ_T0001531.1 MGP_129S1SvImJ_G0001449.1 mouse_genomes_project 5 33838082 33840787 - TEC TEC MGP_129S1SvImJ_T0004815.1 MGP_129S1SvImJ_G0004156.1 mouse_genomes_project 5 119437634 119467817 + Srrm4os antisense antisense MGP_129S1SvImJ_T0004816.1 MGP_129S1SvImJ_G0004156.1 mouse_genomes_project 5 119437634 119471207 + Srrm4os antisense antisense MGP_129S1SvImJ_T0075314.1 MGP_129S1SvImJ_G0030256.1 mouse_genomes_project 5 142956151 142959727 + MGP_129S1SvImJ_P0075314 Cops6 protein_coding protein_coding MGP_129S1SvImJ_T0075315.1 MGP_129S1SvImJ_G0030256.1 mouse_genomes_project 5 142956180 142959059 + MGP_129S1SvImJ_P0075315 Cops6 protein_coding protein_coding MGP_129S1SvImJ_T0075316.1 MGP_129S1SvImJ_G0030256.1 mouse_genomes_project 5 142956189 142957465 + Cops6 protein_coding retained_intron MGP_129S1SvImJ_T0075317.1 MGP_129S1SvImJ_G0030256.1 mouse_genomes_project 5 142956249 142959220 + Cops6 protein_coding retained_intron MGP_129S1SvImJ_T0075318.1 MGP_129S1SvImJ_G0030256.1 mouse_genomes_project 5 142957857 142959000 + MGP_129S1SvImJ_P0075318 Cops6 protein_coding protein_coding MGP_129S1SvImJ_T0076104.1 MGP_129S1SvImJ_G0030414.1 mouse_genomes_project 5 156926413 156968818 + MGP_129S1SvImJ_P0076104 Kl protein_coding protein_coding MGP_129S1SvImJ_T0076105.1 MGP_129S1SvImJ_G0030414.1 mouse_genomes_project 5 156926510 156960766 + Kl protein_coding retained_intron MGP_129S1SvImJ_T0008414.1 MGP_129S1SvImJ_G0006826.1 mouse_genomes_project 5 135625360 135649005 - Gm42590 lincRNA lincRNA MGP_129S1SvImJ_T0001575.1 MGP_129S1SvImJ_G0001493.1 mouse_genomes_project 5 47077359 47079113 + TEC TEC MGP_129S1SvImJ_T0099967.1 MGP_129S1SvImJ_G0038034.1 mouse_genomes_project 5 128495976 128496074 - Gm24854 snRNA snRNA MGP_129S1SvImJ_T0014901.1 MGP_129S1SvImJ_G0012990.1 mouse_genomes_project 5 18760410 18760662 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008249.1 MGP_129S1SvImJ_G0006724.1 mouse_genomes_project 5 104850366 104922869 - 4930429D17Rik lincRNA lincRNA MGP_129S1SvImJ_T0008269.1 MGP_129S1SvImJ_G0006738.1 mouse_genomes_project 5 108541005 108541518 + Gm29464 lincRNA lincRNA MGP_129S1SvImJ_T0070102.1 MGP_129S1SvImJ_G0029280.1 mouse_genomes_project 5 5008669 5031499 + MGP_129S1SvImJ_P0070102 Sri protein_coding protein_coding MGP_129S1SvImJ_T0070103.1 MGP_129S1SvImJ_G0029280.1 mouse_genomes_project 5 5019120 5031271 + MGP_129S1SvImJ_P0070103 Sri protein_coding protein_coding MGP_129S1SvImJ_T0070104.1 MGP_129S1SvImJ_G0029280.1 mouse_genomes_project 5 5019151 5020449 + Sri protein_coding retained_intron MGP_129S1SvImJ_T0070105.1 MGP_129S1SvImJ_G0029280.1 mouse_genomes_project 5 5019155 5022315 + Sri protein_coding retained_intron MGP_129S1SvImJ_T0070106.1 MGP_129S1SvImJ_G0029280.1 mouse_genomes_project 5 5019201 5027199 + Sri protein_coding retained_intron MGP_129S1SvImJ_T0070107.1 MGP_129S1SvImJ_G0029280.1 mouse_genomes_project 5 5021935 5029876 + Sri protein_coding retained_intron MGP_129S1SvImJ_T0070108.1 MGP_129S1SvImJ_G0029280.1 mouse_genomes_project 5 5023867 5025073 + Sri protein_coding retained_intron MGP_129S1SvImJ_T0004878.1 MGP_129S1SvImJ_G0004199.1 mouse_genomes_project 5 139623645 139624529 - Gm43500 antisense antisense MGP_129S1SvImJ_T0101922.1 MGP_129S1SvImJ_G0039828.1 mouse_genomes_project 5 74433500 74435076 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0001881.1 MGP_129S1SvImJ_G0001795.1 mouse_genomes_project 5 136234079 136237916 - TEC TEC MGP_129S1SvImJ_T0004821.1 MGP_129S1SvImJ_G0004160.1 mouse_genomes_project 5 121212479 121216833 + Gm9754 antisense antisense MGP_129S1SvImJ_T0015072.1 MGP_129S1SvImJ_G0013161.1 mouse_genomes_project 5 87875899 87876959 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075599.1 MGP_129S1SvImJ_G0030315.1 mouse_genomes_project 5 147882802 147885597 + Wipi2 protein_coding retained_intron MGP_129S1SvImJ_T0075600.1 MGP_129S1SvImJ_G0030315.1 mouse_genomes_project 5 147884648 147926537 + MGP_129S1SvImJ_P0075600 Wipi2 protein_coding protein_coding MGP_129S1SvImJ_T0075601.1 MGP_129S1SvImJ_G0030315.1 mouse_genomes_project 5 147884697 147918658 + Wipi2 protein_coding retained_intron MGP_129S1SvImJ_T0075602.1 MGP_129S1SvImJ_G0030315.1 mouse_genomes_project 5 147884699 147923436 + MGP_129S1SvImJ_P0075602 Wipi2 protein_coding protein_coding MGP_129S1SvImJ_T0075603.1 MGP_129S1SvImJ_G0030315.1 mouse_genomes_project 5 147918462 147920593 + Wipi2 protein_coding retained_intron MGP_129S1SvImJ_T0071972.1 MGP_129S1SvImJ_G0029597.1 mouse_genomes_project 5 67401904 67637117 - MGP_129S1SvImJ_P0071972 Atp8a1 protein_coding protein_coding MGP_129S1SvImJ_T0071973.1 MGP_129S1SvImJ_G0029597.1 mouse_genomes_project 5 67401904 67637181 - MGP_129S1SvImJ_P0071973 Atp8a1 protein_coding protein_coding MGP_129S1SvImJ_T0071974.1 MGP_129S1SvImJ_G0029597.1 mouse_genomes_project 5 67402920 67637178 - MGP_129S1SvImJ_P0071974 Atp8a1 protein_coding protein_coding MGP_129S1SvImJ_T0071975.1 MGP_129S1SvImJ_G0029597.1 mouse_genomes_project 5 67404336 67637042 - MGP_129S1SvImJ_P0071975 Atp8a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071976.1 MGP_129S1SvImJ_G0029597.1 mouse_genomes_project 5 67406437 67443764 - Atp8a1 protein_coding processed_transcript MGP_129S1SvImJ_T0071977.1 MGP_129S1SvImJ_G0029597.1 mouse_genomes_project 5 67467167 67563421 - Atp8a1 protein_coding retained_intron MGP_129S1SvImJ_T0071978.1 MGP_129S1SvImJ_G0029597.1 mouse_genomes_project 5 67553294 67555777 - Atp8a1 protein_coding retained_intron MGP_129S1SvImJ_T0071979.1 MGP_129S1SvImJ_G0029597.1 mouse_genomes_project 5 67562829 67602722 - Atp8a1 protein_coding processed_transcript MGP_129S1SvImJ_T0071980.1 MGP_129S1SvImJ_G0029597.1 mouse_genomes_project 5 67567540 67637178 - MGP_129S1SvImJ_P0071980 Atp8a1 protein_coding protein_coding MGP_129S1SvImJ_T0071981.1 MGP_129S1SvImJ_G0029597.1 mouse_genomes_project 5 67567540 67637178 - MGP_129S1SvImJ_P0071981 Atp8a1 protein_coding protein_coding MGP_129S1SvImJ_T0071982.1 MGP_129S1SvImJ_G0029597.1 mouse_genomes_project 5 67573694 67637176 - Atp8a1 protein_coding retained_intron MGP_129S1SvImJ_T0071983.1 MGP_129S1SvImJ_G0029597.1 mouse_genomes_project 5 67592830 67596190 - Atp8a1 protein_coding retained_intron MGP_129S1SvImJ_T0071984.1 MGP_129S1SvImJ_G0029597.1 mouse_genomes_project 5 67599659 67602731 - Atp8a1 protein_coding retained_intron MGP_129S1SvImJ_T0071985.1 MGP_129S1SvImJ_G0029597.1 mouse_genomes_project 5 67599663 67603345 - MGP_129S1SvImJ_P0071985 Atp8a1 protein_coding protein_coding MGP_129S1SvImJ_T0015045.1 MGP_129S1SvImJ_G0013134.1 mouse_genomes_project 5 72670563 72670873 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075128.1 MGP_129S1SvImJ_G0030220.1 mouse_genomes_project 5 142019140 142021688 + MGP_129S1SvImJ_P0075128 Ache protein_coding protein_coding MGP_129S1SvImJ_T0075129.1 MGP_129S1SvImJ_G0030220.1 mouse_genomes_project 5 142019387 142021688 + MGP_129S1SvImJ_P0075129 Ache protein_coding protein_coding MGP_129S1SvImJ_T0075130.1 MGP_129S1SvImJ_G0030220.1 mouse_genomes_project 5 142019387 142021688 + MGP_129S1SvImJ_P0075130 Ache protein_coding protein_coding MGP_129S1SvImJ_T0075131.1 MGP_129S1SvImJ_G0030220.1 mouse_genomes_project 5 142019898 142026011 + MGP_129S1SvImJ_P0075131 Ache protein_coding protein_coding MGP_129S1SvImJ_T0075132.1 MGP_129S1SvImJ_G0030220.1 mouse_genomes_project 5 142019904 142026006 + MGP_129S1SvImJ_P0075132 Ache protein_coding protein_coding MGP_129S1SvImJ_T0075133.1 MGP_129S1SvImJ_G0030220.1 mouse_genomes_project 5 142019905 142026005 + MGP_129S1SvImJ_P0075133 Ache protein_coding protein_coding MGP_129S1SvImJ_T0075134.1 MGP_129S1SvImJ_G0030220.1 mouse_genomes_project 5 142019906 142023882 + Ache protein_coding retained_intron MGP_129S1SvImJ_T0075135.1 MGP_129S1SvImJ_G0030220.1 mouse_genomes_project 5 142020621 142021688 + MGP_129S1SvImJ_P0075135 Ache protein_coding protein_coding MGP_129S1SvImJ_T0075136.1 MGP_129S1SvImJ_G0030220.1 mouse_genomes_project 5 142020780 142021688 + MGP_129S1SvImJ_P0075136 Ache protein_coding protein_coding MGP_129S1SvImJ_T0102556.1 MGP_129S1SvImJ_G0040389.1 mouse_genomes_project 5 13105707 13106740 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0008130.1 MGP_129S1SvImJ_G0006628.1 mouse_genomes_project 5 42106030 42110192 + Gm43021 lincRNA lincRNA MGP_129S1SvImJ_T0008121.1 MGP_129S1SvImJ_G0006621.1 mouse_genomes_project 5 37915718 37937570 + Gm42524 lincRNA lincRNA MGP_129S1SvImJ_T0072146.1 MGP_129S1SvImJ_G0029631.1 mouse_genomes_project 5 74261077 74266562 + MGP_129S1SvImJ_P0072146 Rasl11b protein_coding protein_coding MGP_129S1SvImJ_T0072147.1 MGP_129S1SvImJ_G0029631.1 mouse_genomes_project 5 74261236 74262082 + Rasl11b protein_coding retained_intron MGP_129S1SvImJ_T0072148.1 MGP_129S1SvImJ_G0029631.1 mouse_genomes_project 5 74264971 74266553 + Rasl11b protein_coding retained_intron MGP_129S1SvImJ_T0071986.1 MGP_129S1SvImJ_G0029598.1 mouse_genomes_project 5 67713218 67732343 - MGP_129S1SvImJ_P0071986 Gm21905 protein_coding protein_coding MGP_129S1SvImJ_T0014906.1 MGP_129S1SvImJ_G0012995.1 mouse_genomes_project 5 19327578 19327861 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008183.1 MGP_129S1SvImJ_G0006672.1 mouse_genomes_project 5 75518218 75530825 - Gm42800 lincRNA lincRNA MGP_129S1SvImJ_T0008319.1 MGP_129S1SvImJ_G0006767.1 mouse_genomes_project 5 117308506 117311234 + Gm13790 lincRNA lincRNA MGP_129S1SvImJ_T0070494.1 MGP_129S1SvImJ_G0029352.1 mouse_genomes_project 5 22338358 22352129 - Smarcd3 protein_coding retained_intron MGP_129S1SvImJ_T0070495.1 MGP_129S1SvImJ_G0029352.1 mouse_genomes_project 5 22340162 22377149 - MGP_129S1SvImJ_P0070495 Smarcd3 protein_coding protein_coding MGP_129S1SvImJ_T0070496.1 MGP_129S1SvImJ_G0029352.1 mouse_genomes_project 5 22340162 22352165 - MGP_129S1SvImJ_P0070496 Smarcd3 protein_coding protein_coding MGP_129S1SvImJ_T0070498.1 MGP_129S1SvImJ_G0029352.1 mouse_genomes_project 5 22342236 22344391 - Smarcd3 protein_coding retained_intron MGP_129S1SvImJ_T0070499.1 MGP_129S1SvImJ_G0029352.1 mouse_genomes_project 5 22342705 22352088 - Smarcd3 protein_coding retained_intron MGP_129S1SvImJ_T0070500.1 MGP_129S1SvImJ_G0029352.1 mouse_genomes_project 5 22343276 22346492 - Smarcd3 protein_coding retained_intron MGP_129S1SvImJ_T0070501.1 MGP_129S1SvImJ_G0029352.1 mouse_genomes_project 5 22343287 22344531 - Smarcd3 protein_coding retained_intron MGP_129S1SvImJ_T0070502.1 MGP_129S1SvImJ_G0029352.1 mouse_genomes_project 5 22343408 22352053 - Smarcd3 protein_coding retained_intron MGP_129S1SvImJ_T0070503.1 MGP_129S1SvImJ_G0029352.1 mouse_genomes_project 5 22375263 22375874 - Smarcd3 protein_coding processed_transcript MGP_129S1SvImJ_T0015154.1 MGP_129S1SvImJ_G0013243.1 mouse_genomes_project 5 116955709 116956455 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0070035.1 MGP_129S1SvImJ_G0029269.1 mouse_genomes_project 5 1624433 1628631 - MGP_129S1SvImJ_P0070035 Fzd1 protein_coding protein_coding MGP_129S1SvImJ_T0001572.1 MGP_129S1SvImJ_G0001490.1 mouse_genomes_project 5 46846504 46849101 + TEC TEC MGP_129S1SvImJ_T0001488.1 MGP_129S1SvImJ_G0001409.1 mouse_genomes_project 5 18238516 18239015 + TEC TEC MGP_129S1SvImJ_T0075546.1 MGP_129S1SvImJ_G0030304.1 mouse_genomes_project 5 145773830 145817721 - MGP_129S1SvImJ_P0075546 Iqce protein_coding protein_coding MGP_129S1SvImJ_T0075547.1 MGP_129S1SvImJ_G0030304.1 mouse_genomes_project 5 145775508 145778245 - Iqce protein_coding retained_intron MGP_129S1SvImJ_T0075548.1 MGP_129S1SvImJ_G0030304.1 mouse_genomes_project 5 145775508 145817608 - Iqce protein_coding retained_intron MGP_129S1SvImJ_T0075549.1 MGP_129S1SvImJ_G0030304.1 mouse_genomes_project 5 145777283 145817682 - MGP_129S1SvImJ_P0075549 Iqce protein_coding protein_coding MGP_129S1SvImJ_T0075550.1 MGP_129S1SvImJ_G0030304.1 mouse_genomes_project 5 145778032 145795449 - MGP_129S1SvImJ_P0075550 Iqce protein_coding protein_coding MGP_129S1SvImJ_T0075551.1 MGP_129S1SvImJ_G0030304.1 mouse_genomes_project 5 145778161 145781363 - Iqce protein_coding retained_intron MGP_129S1SvImJ_T0075552.1 MGP_129S1SvImJ_G0030304.1 mouse_genomes_project 5 145794979 145803927 - Iqce protein_coding retained_intron MGP_129S1SvImJ_T0075553.1 MGP_129S1SvImJ_G0030304.1 mouse_genomes_project 5 145795763 145817619 - Iqce protein_coding retained_intron MGP_129S1SvImJ_T0075554.1 MGP_129S1SvImJ_G0030304.1 mouse_genomes_project 5 145803923 145817312 - Iqce protein_coding processed_transcript MGP_129S1SvImJ_T0075555.1 MGP_129S1SvImJ_G0030304.1 mouse_genomes_project 5 145803928 145817721 - MGP_129S1SvImJ_P0075555 Iqce protein_coding protein_coding MGP_129S1SvImJ_T0075556.1 MGP_129S1SvImJ_G0030304.1 mouse_genomes_project 5 145806724 145817643 - MGP_129S1SvImJ_P0075556 Iqce protein_coding protein_coding MGP_129S1SvImJ_T0075557.1 MGP_129S1SvImJ_G0030304.1 mouse_genomes_project 5 145807122 145817637 - Iqce protein_coding retained_intron MGP_129S1SvImJ_T0072747.1 MGP_129S1SvImJ_G0029768.1 mouse_genomes_project 5 98359743 98389988 - MGP_129S1SvImJ_P0072747 Paqr3 protein_coding protein_coding MGP_129S1SvImJ_T0072748.1 MGP_129S1SvImJ_G0029768.1 mouse_genomes_project 5 98364467 98389966 - MGP_129S1SvImJ_P0072748 Paqr3 protein_coding protein_coding MGP_129S1SvImJ_T0072749.1 MGP_129S1SvImJ_G0029768.1 mouse_genomes_project 5 98374184 98376022 - Paqr3 protein_coding retained_intron MGP_129S1SvImJ_T0072750.1 MGP_129S1SvImJ_G0029768.1 mouse_genomes_project 5 98375774 98389837 - MGP_129S1SvImJ_P0072750 Paqr3 protein_coding protein_coding MGP_129S1SvImJ_T0072751.1 MGP_129S1SvImJ_G0029768.1 mouse_genomes_project 5 98380564 98389988 - MGP_129S1SvImJ_P0072751 Paqr3 protein_coding protein_coding MGP_129S1SvImJ_T0072752.1 MGP_129S1SvImJ_G0029768.1 mouse_genomes_project 5 98383003 98389976 - Paqr3 protein_coding retained_intron MGP_129S1SvImJ_T0098961.1 MGP_129S1SvImJ_G0037039.1 mouse_genomes_project 5 112648911 112649619 + Gm43138 sense_intronic sense_intronic MGP_129S1SvImJ_T0015119.1 MGP_129S1SvImJ_G0013208.1 mouse_genomes_project 5 107708006 107709361 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008402.1 MGP_129S1SvImJ_G0006821.1 mouse_genomes_project 5 132455250 132458542 + Gm42495 lincRNA lincRNA MGP_129S1SvImJ_T0074613.1 MGP_129S1SvImJ_G0030128.1 mouse_genomes_project 5 133792045 133804651 - Sept14 protein_coding processed_transcript MGP_129S1SvImJ_T0074614.1 MGP_129S1SvImJ_G0030128.1 mouse_genomes_project 5 133792056 133818573 - MGP_129S1SvImJ_P0074614 Sept14 protein_coding protein_coding MGP_129S1SvImJ_T0074615.1 MGP_129S1SvImJ_G0030128.1 mouse_genomes_project 5 133792093 133822165 - MGP_129S1SvImJ_P0074615 Sept14 protein_coding protein_coding MGP_129S1SvImJ_T0001804.1 MGP_129S1SvImJ_G0001719.1 mouse_genomes_project 5 119863569 119864002 + TEC TEC MGP_129S1SvImJ_T0001512.1 MGP_129S1SvImJ_G0001431.1 mouse_genomes_project 5 29476990 29478378 + TEC TEC MGP_129S1SvImJ_T0070809.1 MGP_129S1SvImJ_G0029413.1 mouse_genomes_project 5 29130150 29144834 - Gm29609 protein_coding processed_transcript MGP_129S1SvImJ_T0070812.1 MGP_129S1SvImJ_G0029413.1 mouse_genomes_project 5 29137820 29167684 - MGP_129S1SvImJ_P0070812 Gm29609 protein_coding protein_coding MGP_129S1SvImJ_T0001875.1 MGP_129S1SvImJ_G0001789.1 mouse_genomes_project 5 135942969 135944124 - TEC TEC MGP_129S1SvImJ_T0073778.1 MGP_129S1SvImJ_G0029982.1 mouse_genomes_project 5 119438179 119459517 - MGP_129S1SvImJ_P0073778 Srrm4 protein_coding protein_coding MGP_129S1SvImJ_T0073779.1 MGP_129S1SvImJ_G0029982.1 mouse_genomes_project 5 119438189 119459641 - Srrm4 protein_coding retained_intron MGP_129S1SvImJ_T0073780.1 MGP_129S1SvImJ_G0029982.1 mouse_genomes_project 5 119438190 119606779 - MGP_129S1SvImJ_P0073780 Srrm4 protein_coding protein_coding MGP_129S1SvImJ_T0073781.1 MGP_129S1SvImJ_G0029982.1 mouse_genomes_project 5 119481969 119482748 - Srrm4 protein_coding retained_intron MGP_129S1SvImJ_T0098948.1 MGP_129S1SvImJ_G0037026.1 mouse_genomes_project 5 2211434 2214030 - Gm43728 sense_intronic sense_intronic MGP_129S1SvImJ_T0015100.1 MGP_129S1SvImJ_G0013189.1 mouse_genomes_project 5 100401288 100401708 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004721.1 MGP_129S1SvImJ_G0004089.1 mouse_genomes_project 5 66367785 66417398 - Uchl1os antisense antisense MGP_129S1SvImJ_T0004722.1 MGP_129S1SvImJ_G0004089.1 mouse_genomes_project 5 66396722 66416933 - Uchl1os antisense antisense MGP_129S1SvImJ_T0001774.1 MGP_129S1SvImJ_G0001689.1 mouse_genomes_project 5 110722289 110724401 - TEC TEC MGP_129S1SvImJ_T0008302.1 MGP_129S1SvImJ_G0006757.1 mouse_genomes_project 5 114726517 114735332 + Gm42491 lincRNA lincRNA MGP_129S1SvImJ_T0074126.1 MGP_129S1SvImJ_G0030051.1 mouse_genomes_project 5 126023111 126033974 + Arpc3 protein_coding retained_intron MGP_129S1SvImJ_T0074127.1 MGP_129S1SvImJ_G0030051.1 mouse_genomes_project 5 126023155 126028840 + Arpc3 protein_coding retained_intron MGP_129S1SvImJ_T0074128.1 MGP_129S1SvImJ_G0030051.1 mouse_genomes_project 5 126023181 126037581 + MGP_129S1SvImJ_P0074128 Arpc3 protein_coding protein_coding MGP_129S1SvImJ_T0074129.1 MGP_129S1SvImJ_G0030051.1 mouse_genomes_project 5 126028513 126045824 + MGP_129S1SvImJ_P0074129 Arpc3 protein_coding protein_coding MGP_129S1SvImJ_T0074130.1 MGP_129S1SvImJ_G0030051.1 mouse_genomes_project 5 126031918 126037796 + MGP_129S1SvImJ_P0074130 Arpc3 protein_coding protein_coding MGP_129S1SvImJ_T0074131.1 MGP_129S1SvImJ_G0030051.1 mouse_genomes_project 5 126032045 126037787 + MGP_129S1SvImJ_P0074131 Arpc3 protein_coding protein_coding MGP_129S1SvImJ_T0074132.1 MGP_129S1SvImJ_G0030051.1 mouse_genomes_project 5 126035061 126036429 + Arpc3 protein_coding retained_intron MGP_129S1SvImJ_T0070894.1 MGP_129S1SvImJ_G0029423.1 mouse_genomes_project 5 29290347 29294042 - MGP_129S1SvImJ_P0070894 Fndc4 protein_coding protein_coding MGP_129S1SvImJ_T0070895.1 MGP_129S1SvImJ_G0029423.1 mouse_genomes_project 5 29290991 29293977 - MGP_129S1SvImJ_P0070895 Fndc4 protein_coding protein_coding MGP_129S1SvImJ_T0070896.1 MGP_129S1SvImJ_G0029423.1 mouse_genomes_project 5 29290991 29291819 - MGP_129S1SvImJ_P0070896 Fndc4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0070897.1 MGP_129S1SvImJ_G0029423.1 mouse_genomes_project 5 29291377 29292072 - Fndc4 protein_coding retained_intron MGP_129S1SvImJ_T0070898.1 MGP_129S1SvImJ_G0029423.1 mouse_genomes_project 5 29291791 29293539 - MGP_129S1SvImJ_P0070898 Fndc4 protein_coding protein_coding MGP_129S1SvImJ_T0070899.1 MGP_129S1SvImJ_G0029423.1 mouse_genomes_project 5 29292191 29293365 - Fndc4 protein_coding retained_intron MGP_129S1SvImJ_T0070900.1 MGP_129S1SvImJ_G0029423.1 mouse_genomes_project 5 29292820 29294186 - MGP_129S1SvImJ_P0070900 Fndc4 protein_coding protein_coding MGP_129S1SvImJ_T0075659.1 MGP_129S1SvImJ_G0030327.1 mouse_genomes_project 5 148609227 148613825 - MGP_129S1SvImJ_P0075659 Zfp853 protein_coding protein_coding MGP_129S1SvImJ_T0014903.1 MGP_129S1SvImJ_G0012992.1 mouse_genomes_project 5 19149856 19150664 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010730.1 MGP_129S1SvImJ_G0008846.1 mouse_genomes_project 5 125391180 125391245 - Mir7031 miRNA miRNA MGP_129S1SvImJ_T0074569.1 MGP_129S1SvImJ_G0030120.1 mouse_genomes_project 5 132733094 132775214 + MGP_129S1SvImJ_P0074569 Piwil1 protein_coding protein_coding MGP_129S1SvImJ_T0074570.1 MGP_129S1SvImJ_G0030120.1 mouse_genomes_project 5 132764073 132783319 + MGP_129S1SvImJ_P0074570 Piwil1 protein_coding protein_coding MGP_129S1SvImJ_T0074571.1 MGP_129S1SvImJ_G0030120.1 mouse_genomes_project 5 132765389 132782444 + MGP_129S1SvImJ_P0074571 Piwil1 protein_coding protein_coding MGP_129S1SvImJ_T0073650.1 MGP_129S1SvImJ_G0029961.1 mouse_genomes_project 5 118080563 118086356 + MGP_129S1SvImJ_P0073650 Pop5 protein_coding protein_coding MGP_129S1SvImJ_T0073651.1 MGP_129S1SvImJ_G0029961.1 mouse_genomes_project 5 118083339 118085607 + Pop5 protein_coding processed_transcript MGP_129S1SvImJ_T0073652.1 MGP_129S1SvImJ_G0029961.1 mouse_genomes_project 5 118083392 118090728 + MGP_129S1SvImJ_P0073652 Pop5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073653.1 MGP_129S1SvImJ_G0029961.1 mouse_genomes_project 5 118083395 118086309 + Pop5 protein_coding processed_transcript MGP_129S1SvImJ_T0073654.1 MGP_129S1SvImJ_G0029961.1 mouse_genomes_project 5 118083407 118086032 + Pop5 protein_coding retained_intron MGP_129S1SvImJ_T0073655.1 MGP_129S1SvImJ_G0029961.1 mouse_genomes_project 5 118085705 118086331 + Pop5 protein_coding processed_transcript MGP_129S1SvImJ_T0004746.1 MGP_129S1SvImJ_G0004110.1 mouse_genomes_project 5 88881962 88958338 - 1700066N21Rik antisense antisense MGP_129S1SvImJ_T0008343.1 MGP_129S1SvImJ_G0006783.1 mouse_genomes_project 5 122089231 122090885 - Gm43782 lincRNA lincRNA MGP_129S1SvImJ_T0014863.1 MGP_129S1SvImJ_G0012952.1 mouse_genomes_project 5 1968563 2706816 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0072673.1 MGP_129S1SvImJ_G0029753.1 mouse_genomes_project 5 93744990 93781448 + MGP_129S1SvImJ_P0072673 Fam47e protein_coding protein_coding MGP_129S1SvImJ_T0072674.1 MGP_129S1SvImJ_G0029753.1 mouse_genomes_project 5 93745023 93781348 + MGP_129S1SvImJ_P0072674 Fam47e protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072675.1 MGP_129S1SvImJ_G0029753.1 mouse_genomes_project 5 93762213 93781570 + MGP_129S1SvImJ_P0072675 Fam47e protein_coding protein_coding MGP_129S1SvImJ_T0072676.1 MGP_129S1SvImJ_G0029753.1 mouse_genomes_project 5 93762279 93776065 + MGP_129S1SvImJ_P0072676 Fam47e protein_coding protein_coding MGP_129S1SvImJ_T0072677.1 MGP_129S1SvImJ_G0029753.1 mouse_genomes_project 5 93762292 93781419 + MGP_129S1SvImJ_P0072677 Fam47e protein_coding protein_coding MGP_129S1SvImJ_T0072678.1 MGP_129S1SvImJ_G0029753.1 mouse_genomes_project 5 93762408 93781302 + MGP_129S1SvImJ_P0072678 Fam47e protein_coding protein_coding MGP_129S1SvImJ_T0071038.1 MGP_129S1SvImJ_G0029446.1 mouse_genomes_project 5 31605941 31609184 - MGP_129S1SvImJ_P0071038 Nkx1-1 protein_coding protein_coding MGP_129S1SvImJ_T0101218.1 MGP_129S1SvImJ_G0039285.1 mouse_genomes_project 5 133911074 133911209 + Gm23245 snoRNA snoRNA MGP_129S1SvImJ_T0001724.1 MGP_129S1SvImJ_G0001639.1 mouse_genomes_project 5 76853930 76856357 - TEC TEC MGP_129S1SvImJ_T0001657.1 MGP_129S1SvImJ_G0001573.1 mouse_genomes_project 5 65280159 65282982 + TEC TEC MGP_129S1SvImJ_T0001524.1 MGP_129S1SvImJ_G0001442.1 mouse_genomes_project 5 31840415 31841570 + TEC TEC MGP_129S1SvImJ_T0015145.1 MGP_129S1SvImJ_G0013234.1 mouse_genomes_project 5 112774886 112775205 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015003.1 MGP_129S1SvImJ_G0013092.1 mouse_genomes_project 5 56508893 56510243 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0074681.1 MGP_129S1SvImJ_G0030141.1 mouse_genomes_project 5 134259374 134270312 + MGP_129S1SvImJ_P0074681 Kctd7 protein_coding protein_coding MGP_129S1SvImJ_T0074682.1 MGP_129S1SvImJ_G0030141.1 mouse_genomes_project 5 134259437 134266238 + MGP_129S1SvImJ_P0074682 Kctd7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0074683.1 MGP_129S1SvImJ_G0030141.1 mouse_genomes_project 5 134259617 134267000 + MGP_129S1SvImJ_P0074683 Kctd7 protein_coding protein_coding MGP_129S1SvImJ_T0004865.1 MGP_129S1SvImJ_G0004189.1 mouse_genomes_project 5 134340599 134343214 - Gm42469 antisense antisense MGP_129S1SvImJ_T0008334.1 MGP_129S1SvImJ_G0006776.1 mouse_genomes_project 5 119288423 119294371 + B230112J18Rik lincRNA lincRNA MGP_129S1SvImJ_T0001502.1 MGP_129S1SvImJ_G0001422.1 mouse_genomes_project 5 25931783 25936136 - TEC TEC MGP_129S1SvImJ_T0072792.1 MGP_129S1SvImJ_G0029781.1 mouse_genomes_project 5 101427478 101428081 + MGP_129S1SvImJ_P0072792 4930524J08Rik protein_coding protein_coding MGP_129S1SvImJ_T0008397.1 MGP_129S1SvImJ_G0006817.1 mouse_genomes_project 5 131036774 131037562 + Gm43475 lincRNA lincRNA MGP_129S1SvImJ_T0072417.1 MGP_129S1SvImJ_G0029689.1 mouse_genomes_project 5 88617263 88626889 + Csn1s1 protein_coding retained_intron MGP_129S1SvImJ_T0072418.1 MGP_129S1SvImJ_G0029689.1 mouse_genomes_project 5 88617263 88618533 + Csn1s1 protein_coding retained_intron MGP_129S1SvImJ_T0072419.1 MGP_129S1SvImJ_G0029689.1 mouse_genomes_project 5 88617263 88618591 + Csn1s1 protein_coding retained_intron MGP_129S1SvImJ_T0072420.1 MGP_129S1SvImJ_G0029689.1 mouse_genomes_project 5 88617282 88626498 + MGP_129S1SvImJ_P0072420 Csn1s1 protein_coding protein_coding MGP_129S1SvImJ_T0072421.1 MGP_129S1SvImJ_G0029689.1 mouse_genomes_project 5 88617283 88634561 + MGP_129S1SvImJ_P0072421 Csn1s1 protein_coding protein_coding MGP_129S1SvImJ_T0072422.1 MGP_129S1SvImJ_G0029689.1 mouse_genomes_project 5 88617288 88634561 + MGP_129S1SvImJ_P0072422 Csn1s1 protein_coding protein_coding MGP_129S1SvImJ_T0072423.1 MGP_129S1SvImJ_G0029689.1 mouse_genomes_project 5 88617902 88627354 + Csn1s1 protein_coding processed_transcript MGP_129S1SvImJ_T0072424.1 MGP_129S1SvImJ_G0029689.1 mouse_genomes_project 5 88618288 88622011 + Csn1s1 protein_coding retained_intron MGP_129S1SvImJ_T0072425.1 MGP_129S1SvImJ_G0029689.1 mouse_genomes_project 5 88623787 88624713 + Csn1s1 protein_coding retained_intron MGP_129S1SvImJ_T0072426.1 MGP_129S1SvImJ_G0029689.1 mouse_genomes_project 5 88629577 88631347 + Csn1s1 protein_coding retained_intron MGP_129S1SvImJ_T0072427.1 MGP_129S1SvImJ_G0029689.1 mouse_genomes_project 5 88629890 88634481 + Csn1s1 protein_coding retained_intron MGP_129S1SvImJ_T0072428.1 MGP_129S1SvImJ_G0029689.1 mouse_genomes_project 5 88631025 88634507 + Csn1s1 protein_coding retained_intron MGP_129S1SvImJ_T0072429.1 MGP_129S1SvImJ_G0029689.1 mouse_genomes_project 5 88632511 88634041 + Csn1s1 protein_coding retained_intron MGP_129S1SvImJ_T0102572.1 MGP_129S1SvImJ_G0040405.1 mouse_genomes_project 5 97061670 97064161 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0001622.1 MGP_129S1SvImJ_G0001539.1 mouse_genomes_project 5 54977489 54981206 - TEC TEC MGP_129S1SvImJ_T0001758.1 MGP_129S1SvImJ_G0001673.1 mouse_genomes_project 5 104970896 104972032 + TEC TEC MGP_129S1SvImJ_T0073210.1 MGP_129S1SvImJ_G0029876.1 mouse_genomes_project 5 112521086 112524897 + MGP_129S1SvImJ_P0073210 Plcxd1 protein_coding protein_coding MGP_129S1SvImJ_T0073211.1 MGP_129S1SvImJ_G0029876.1 mouse_genomes_project 5 112521539 112522961 + MGP_129S1SvImJ_P0073211 Plcxd1 protein_coding protein_coding MGP_129S1SvImJ_T0073212.1 MGP_129S1SvImJ_G0029876.1 mouse_genomes_project 5 112521676 112527030 + MGP_129S1SvImJ_P0073212 Plcxd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073213.1 MGP_129S1SvImJ_G0029876.1 mouse_genomes_project 5 112522285 112527035 + Plcxd1 protein_coding processed_transcript MGP_129S1SvImJ_T0101190.1 MGP_129S1SvImJ_G0039257.1 mouse_genomes_project 5 61667814 61667946 - Gm22273 snoRNA snoRNA MGP_129S1SvImJ_T0014915.1 MGP_129S1SvImJ_G0013004.1 mouse_genomes_project 5 20519374 20519991 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0075541.1 MGP_129S1SvImJ_G0030303.1 mouse_genomes_project 5 145728103 145757625 - MGP_129S1SvImJ_P0075541 Ttyh3 protein_coding protein_coding MGP_129S1SvImJ_T0075542.1 MGP_129S1SvImJ_G0030303.1 mouse_genomes_project 5 145730616 145734820 - MGP_129S1SvImJ_P0075542 Ttyh3 protein_coding protein_coding MGP_129S1SvImJ_T0075543.1 MGP_129S1SvImJ_G0030303.1 mouse_genomes_project 5 145738669 145739141 - Ttyh3 protein_coding retained_intron MGP_129S1SvImJ_T0075544.1 MGP_129S1SvImJ_G0030303.1 mouse_genomes_project 5 145739050 145744022 - Ttyh3 protein_coding retained_intron MGP_129S1SvImJ_T0075545.1 MGP_129S1SvImJ_G0030303.1 mouse_genomes_project 5 145757268 145757795 - Ttyh3 protein_coding processed_transcript MGP_129S1SvImJ_T0099974.1 MGP_129S1SvImJ_G0038041.1 mouse_genomes_project 5 143231776 143231883 + Gm25525 snRNA snRNA MGP_129S1SvImJ_T0014984.1 MGP_129S1SvImJ_G0013073.1 mouse_genomes_project 5 44368105 44368730 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098947.1 MGP_129S1SvImJ_G0037025.1 mouse_genomes_project 5 2206807 2209436 - Gm43727 sense_intronic sense_intronic MGP_129S1SvImJ_T0071187.1 MGP_129S1SvImJ_G0029468.1 mouse_genomes_project 5 32880687 32884235 - MGP_129S1SvImJ_P0071187 Mfsd10 protein_coding protein_coding MGP_129S1SvImJ_T0071188.1 MGP_129S1SvImJ_G0029468.1 mouse_genomes_project 5 32880691 32884258 - MGP_129S1SvImJ_P0071188 Mfsd10 protein_coding protein_coding MGP_129S1SvImJ_T0071189.1 MGP_129S1SvImJ_G0029468.1 mouse_genomes_project 5 32880692 32881773 - Mfsd10 protein_coding retained_intron MGP_129S1SvImJ_T0071190.1 MGP_129S1SvImJ_G0029468.1 mouse_genomes_project 5 32880693 32881675 - Mfsd10 protein_coding retained_intron MGP_129S1SvImJ_T0071191.1 MGP_129S1SvImJ_G0029468.1 mouse_genomes_project 5 32880694 32884238 - MGP_129S1SvImJ_P0071191 Mfsd10 protein_coding protein_coding MGP_129S1SvImJ_T0071192.1 MGP_129S1SvImJ_G0029468.1 mouse_genomes_project 5 32880770 32883853 - MGP_129S1SvImJ_P0071192 Mfsd10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071193.1 MGP_129S1SvImJ_G0029468.1 mouse_genomes_project 5 32880960 32881937 - Mfsd10 protein_coding retained_intron MGP_129S1SvImJ_T0071194.1 MGP_129S1SvImJ_G0029468.1 mouse_genomes_project 5 32881040 32883170 - Mfsd10 protein_coding retained_intron MGP_129S1SvImJ_T0071195.1 MGP_129S1SvImJ_G0029468.1 mouse_genomes_project 5 32881359 32882571 - MGP_129S1SvImJ_P0071195 Mfsd10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071196.1 MGP_129S1SvImJ_G0029468.1 mouse_genomes_project 5 32881676 32882111 - MGP_129S1SvImJ_P0071196 Mfsd10 protein_coding protein_coding MGP_129S1SvImJ_T0071197.1 MGP_129S1SvImJ_G0029468.1 mouse_genomes_project 5 32881700 32883162 - MGP_129S1SvImJ_P0071197 Mfsd10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071198.1 MGP_129S1SvImJ_G0029468.1 mouse_genomes_project 5 32881896 32882801 - MGP_129S1SvImJ_P0071198 Mfsd10 protein_coding protein_coding MGP_129S1SvImJ_T0071199.1 MGP_129S1SvImJ_G0029468.1 mouse_genomes_project 5 32881977 32884235 - MGP_129S1SvImJ_P0071199 Mfsd10 protein_coding protein_coding MGP_129S1SvImJ_T0071200.1 MGP_129S1SvImJ_G0029468.1 mouse_genomes_project 5 32882102 32883887 - MGP_129S1SvImJ_P0071200 Mfsd10 protein_coding protein_coding MGP_129S1SvImJ_T0071201.1 MGP_129S1SvImJ_G0029468.1 mouse_genomes_project 5 32882109 32882669 - MGP_129S1SvImJ_P0071201 Mfsd10 protein_coding protein_coding MGP_129S1SvImJ_T0071202.1 MGP_129S1SvImJ_G0029468.1 mouse_genomes_project 5 32882133 32882547 - Mfsd10 protein_coding retained_intron MGP_129S1SvImJ_T0071203.1 MGP_129S1SvImJ_G0029468.1 mouse_genomes_project 5 32882155 32884171 - MGP_129S1SvImJ_P0071203 Mfsd10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071204.1 MGP_129S1SvImJ_G0029468.1 mouse_genomes_project 5 32882431 32883568 - Mfsd10 protein_coding processed_transcript MGP_129S1SvImJ_T0071205.1 MGP_129S1SvImJ_G0029468.1 mouse_genomes_project 5 32882658 32883581 - Mfsd10 protein_coding processed_transcript MGP_129S1SvImJ_T0071206.1 MGP_129S1SvImJ_G0029468.1 mouse_genomes_project 5 32883074 32884106 - Mfsd10 protein_coding retained_intron MGP_129S1SvImJ_T0071207.1 MGP_129S1SvImJ_G0029468.1 mouse_genomes_project 5 32883639 32884186 - MGP_129S1SvImJ_P0071207 Mfsd10 protein_coding protein_coding MGP_129S1SvImJ_T0001514.1 MGP_129S1SvImJ_G0001433.1 mouse_genomes_project 5 29747610 29747842 + TEC TEC MGP_129S1SvImJ_T0015056.1 MGP_129S1SvImJ_G0013145.1 mouse_genomes_project 5 76634076 76635150 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001509.1 MGP_129S1SvImJ_G0001429.1 mouse_genomes_project 5 29071167 29073470 + TEC TEC MGP_129S1SvImJ_T0001510.1 MGP_129S1SvImJ_G0001429.1 mouse_genomes_project 5 29071169 29073470 + TEC TEC MGP_129S1SvImJ_T0001771.1 MGP_129S1SvImJ_G0001686.1 mouse_genomes_project 5 109924509 109925669 + TEC TEC MGP_129S1SvImJ_T0010681.1 MGP_129S1SvImJ_G0008797.1 mouse_genomes_project 5 4855276 4855387 + Gm22196 miRNA miRNA MGP_129S1SvImJ_T0070799.1 MGP_129S1SvImJ_G0029412.1 mouse_genomes_project 5 29126226 29140931 - MGP_129S1SvImJ_P0070799 Mpv17 protein_coding protein_coding MGP_129S1SvImJ_T0070800.1 MGP_129S1SvImJ_G0029412.1 mouse_genomes_project 5 29126235 29140902 - MGP_129S1SvImJ_P0070800 Mpv17 protein_coding protein_coding MGP_129S1SvImJ_T0070801.1 MGP_129S1SvImJ_G0029412.1 mouse_genomes_project 5 29126668 29140878 - MGP_129S1SvImJ_P0070801 Mpv17 protein_coding protein_coding MGP_129S1SvImJ_T0070802.1 MGP_129S1SvImJ_G0029412.1 mouse_genomes_project 5 29127030 29140908 - MGP_129S1SvImJ_P0070802 Mpv17 protein_coding protein_coding MGP_129S1SvImJ_T0070803.1 MGP_129S1SvImJ_G0029412.1 mouse_genomes_project 5 29127088 29140832 - MGP_129S1SvImJ_P0070803 Mpv17 protein_coding protein_coding MGP_129S1SvImJ_T0070804.1 MGP_129S1SvImJ_G0029412.1 mouse_genomes_project 5 29127113 29140872 - MGP_129S1SvImJ_P0070804 Mpv17 protein_coding protein_coding MGP_129S1SvImJ_T0070805.1 MGP_129S1SvImJ_G0029412.1 mouse_genomes_project 5 29127181 29131543 - MGP_129S1SvImJ_P0070805 Mpv17 protein_coding protein_coding MGP_129S1SvImJ_T0070806.1 MGP_129S1SvImJ_G0029412.1 mouse_genomes_project 5 29127283 29131563 - Mpv17 protein_coding retained_intron MGP_129S1SvImJ_T0070807.1 MGP_129S1SvImJ_G0029412.1 mouse_genomes_project 5 29129485 29140898 - Mpv17 protein_coding retained_intron MGP_129S1SvImJ_T0070808.1 MGP_129S1SvImJ_G0029412.1 mouse_genomes_project 5 29129685 29140901 - MGP_129S1SvImJ_P0070808 Mpv17 protein_coding protein_coding MGP_129S1SvImJ_T0070810.1 MGP_129S1SvImJ_G0029412.1 mouse_genomes_project 5 29130542 29140898 - Mpv17 protein_coding retained_intron MGP_129S1SvImJ_T0070811.1 MGP_129S1SvImJ_G0029412.1 mouse_genomes_project 5 29130778 29140422 - Mpv17 protein_coding retained_intron MGP_129S1SvImJ_T0004668.1 MGP_129S1SvImJ_G0004047.1 mouse_genomes_project 5 25418562 25419884 - Gm16058 antisense antisense MGP_129S1SvImJ_T0001659.1 MGP_129S1SvImJ_G0001575.1 mouse_genomes_project 5 65344164 65345716 - TEC TEC MGP_129S1SvImJ_T0008482.1 MGP_129S1SvImJ_G0006879.1 mouse_genomes_project 5 155681386 155691125 - Gm21221 lincRNA lincRNA MGP_129S1SvImJ_T0101189.1 MGP_129S1SvImJ_G0039256.1 mouse_genomes_project 5 60193914 60194037 - Gm23708 snoRNA snoRNA MGP_129S1SvImJ_T0014866.1 MGP_129S1SvImJ_G0012955.1 mouse_genomes_project 5 3285654 3286009 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0073421.1 MGP_129S1SvImJ_G0029916.1 mouse_genomes_project 5 115886428 115961662 - MGP_129S1SvImJ_P0073421 Sgsm1 protein_coding protein_coding MGP_129S1SvImJ_T0073422.1 MGP_129S1SvImJ_G0029916.1 mouse_genomes_project 5 115886437 115929562 - MGP_129S1SvImJ_P0073422 Sgsm1 protein_coding protein_coding MGP_129S1SvImJ_T0073423.1 MGP_129S1SvImJ_G0029916.1 mouse_genomes_project 5 115901702 115929562 - Sgsm1 protein_coding processed_transcript MGP_129S1SvImJ_T0073424.1 MGP_129S1SvImJ_G0029916.1 mouse_genomes_project 5 115902340 115961653 - Sgsm1 protein_coding processed_transcript MGP_129S1SvImJ_T0073425.1 MGP_129S1SvImJ_G0029916.1 mouse_genomes_project 5 115910085 115961615 - MGP_129S1SvImJ_P0073425 Sgsm1 protein_coding protein_coding MGP_129S1SvImJ_T0073426.1 MGP_129S1SvImJ_G0029916.1 mouse_genomes_project 5 115910698 115961573 - MGP_129S1SvImJ_P0073426 Sgsm1 protein_coding protein_coding MGP_129S1SvImJ_T0073427.1 MGP_129S1SvImJ_G0029916.1 mouse_genomes_project 5 115919590 115929548 - MGP_129S1SvImJ_P0073427 Sgsm1 protein_coding protein_coding MGP_129S1SvImJ_T0073428.1 MGP_129S1SvImJ_G0029916.1 mouse_genomes_project 5 115921542 115926691 - Sgsm1 protein_coding retained_intron MGP_129S1SvImJ_T0073429.1 MGP_129S1SvImJ_G0029916.1 mouse_genomes_project 5 115926962 115931849 - Sgsm1 protein_coding retained_intron MGP_129S1SvImJ_T0073430.1 MGP_129S1SvImJ_G0029916.1 mouse_genomes_project 5 115934400 115961596 - Sgsm1 protein_coding retained_intron MGP_129S1SvImJ_T0075535.1 MGP_129S1SvImJ_G0030300.1 mouse_genomes_project 5 145593013 145613016 + MGP_129S1SvImJ_P0075535 Chst12 protein_coding protein_coding MGP_129S1SvImJ_T0075536.1 MGP_129S1SvImJ_G0030300.1 mouse_genomes_project 5 145593038 145611445 + MGP_129S1SvImJ_P0075536 Chst12 protein_coding protein_coding MGP_129S1SvImJ_T0072023.1 MGP_129S1SvImJ_G0029608.1 mouse_genomes_project 5 71451590 71543717 - MGP_129S1SvImJ_P0072023 Gabra4 protein_coding protein_coding MGP_129S1SvImJ_T0072024.1 MGP_129S1SvImJ_G0029608.1 mouse_genomes_project 5 71453042 71543390 - MGP_129S1SvImJ_P0072024 Gabra4 protein_coding protein_coding MGP_129S1SvImJ_T0072025.1 MGP_129S1SvImJ_G0029608.1 mouse_genomes_project 5 71453447 71543299 - MGP_129S1SvImJ_P0072025 Gabra4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0072026.1 MGP_129S1SvImJ_G0029608.1 mouse_genomes_project 5 71453896 71543284 - MGP_129S1SvImJ_P0072026 Gabra4 protein_coding protein_coding MGP_129S1SvImJ_T0072027.1 MGP_129S1SvImJ_G0029608.1 mouse_genomes_project 5 71540604 71543229 - Gabra4 protein_coding retained_intron MGP_129S1SvImJ_T0008197.1 MGP_129S1SvImJ_G0006684.1 mouse_genomes_project 5 77787533 77796167 + Gm42761 lincRNA lincRNA MGP_129S1SvImJ_T0008436.1 MGP_129S1SvImJ_G0006845.1 mouse_genomes_project 5 145710659 145711422 - Gm43703 lincRNA lincRNA MGP_129S1SvImJ_T0072296.1 MGP_129S1SvImJ_G0029656.1 mouse_genomes_project 5 77523637 77551025 + MGP_129S1SvImJ_P0072296 Rest protein_coding protein_coding MGP_129S1SvImJ_T0072297.1 MGP_129S1SvImJ_G0029656.1 mouse_genomes_project 5 77524342 77551030 + MGP_129S1SvImJ_P0072297 Rest protein_coding protein_coding MGP_129S1SvImJ_T0018173.1 MGP_129S1SvImJ_G0015597.1 mouse_genomes_project 5 49319289 49420075 - Gm36814 processed_transcript lincRNA MGP_129S1SvImJ_T0018174.1 MGP_129S1SvImJ_G0015597.1 mouse_genomes_project 5 49399737 49419111 - Gm36814 processed_transcript retained_intron MGP_129S1SvImJ_T0010747.1 MGP_129S1SvImJ_G0008863.1 mouse_genomes_project 5 142295175 142295290 - Mir6418 miRNA miRNA MGP_129S1SvImJ_T0018160.1 MGP_129S1SvImJ_G0015593.1 mouse_genomes_project 5 28909321 28914352 + Abhd1 processed_transcript processed_transcript MGP_129S1SvImJ_T0018161.1 MGP_129S1SvImJ_G0015593.1 mouse_genomes_project 5 28909321 28912664 + Abhd1 processed_transcript processed_transcript MGP_129S1SvImJ_T0018162.1 MGP_129S1SvImJ_G0015593.1 mouse_genomes_project 5 28909344 28912974 + Abhd1 processed_transcript processed_transcript MGP_129S1SvImJ_T0018163.1 MGP_129S1SvImJ_G0015593.1 mouse_genomes_project 5 28909344 28914350 + Abhd1 processed_transcript retained_intron MGP_129S1SvImJ_T0018164.1 MGP_129S1SvImJ_G0015593.1 mouse_genomes_project 5 28909347 28913960 + Abhd1 processed_transcript processed_transcript MGP_129S1SvImJ_T0018165.1 MGP_129S1SvImJ_G0015593.1 mouse_genomes_project 5 28909361 28914350 + Abhd1 processed_transcript processed_transcript MGP_129S1SvImJ_T0018166.1 MGP_129S1SvImJ_G0015593.1 mouse_genomes_project 5 28912634 28913445 + Abhd1 processed_transcript retained_intron MGP_129S1SvImJ_T0001675.1 MGP_129S1SvImJ_G0001591.1 mouse_genomes_project 5 66264985 66266924 - TEC TEC MGP_129S1SvImJ_T0072136.1 MGP_129S1SvImJ_G0029629.1 mouse_genomes_project 5 73665530 73693663 + MGP_129S1SvImJ_P0072136 Spata18 protein_coding protein_coding MGP_129S1SvImJ_T0072137.1 MGP_129S1SvImJ_G0029629.1 mouse_genomes_project 5 73665533 73689574 + MGP_129S1SvImJ_P0072137 Spata18 protein_coding non_stop_decay MGP_129S1SvImJ_T0072138.1 MGP_129S1SvImJ_G0029629.1 mouse_genomes_project 5 73671718 73693633 + MGP_129S1SvImJ_P0072138 Spata18 protein_coding protein_coding MGP_129S1SvImJ_T0072139.1 MGP_129S1SvImJ_G0029629.1 mouse_genomes_project 5 73673450 73693635 + MGP_129S1SvImJ_P0072139 Spata18 protein_coding protein_coding MGP_129S1SvImJ_T0071056.1 MGP_129S1SvImJ_G0029450.1 mouse_genomes_project 5 31841526 31846134 - MGP_129S1SvImJ_P0071056 Tmem129 protein_coding protein_coding MGP_129S1SvImJ_T0071057.1 MGP_129S1SvImJ_G0029450.1 mouse_genomes_project 5 31841533 31846206 - Tmem129 protein_coding retained_intron MGP_129S1SvImJ_T0071058.1 MGP_129S1SvImJ_G0029450.1 mouse_genomes_project 5 31843864 31846163 - Tmem129 protein_coding retained_intron MGP_129S1SvImJ_T0099978.1 MGP_129S1SvImJ_G0038045.1 mouse_genomes_project 5 156488748 156488889 - Gm25284 snRNA snRNA MGP_129S1SvImJ_T0008118.1 MGP_129S1SvImJ_G0006618.1 mouse_genomes_project 5 36753152 36757930 + 4930487D11Rik lincRNA lincRNA MGP_129S1SvImJ_T0001676.1 MGP_129S1SvImJ_G0001592.1 mouse_genomes_project 5 66272577 66274961 - TEC TEC MGP_129S1SvImJ_T0018179.1 MGP_129S1SvImJ_G0015599.1 mouse_genomes_project 5 51977089 52001138 - 5033403H07Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018180.1 MGP_129S1SvImJ_G0015599.1 mouse_genomes_project 5 51977101 51997881 - 5033403H07Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018181.1 MGP_129S1SvImJ_G0015599.1 mouse_genomes_project 5 51996031 51997932 - 5033403H07Rik processed_transcript retained_intron MGP_129S1SvImJ_T0014916.1 MGP_129S1SvImJ_G0013005.1 mouse_genomes_project 5 20519403 20519990 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001493.1 MGP_129S1SvImJ_G0001414.1 mouse_genomes_project 5 21042594 21043379 + TEC TEC MGP_129S1SvImJ_T0075319.1 MGP_129S1SvImJ_G0030257.1 mouse_genomes_project 5 142959663 142968405 - MGP_129S1SvImJ_P0075319 protein_coding protein_coding MGP_129S1SvImJ_T0075320.1 MGP_129S1SvImJ_G0030257.1 mouse_genomes_project 5 142959680 142961122 - protein_coding retained_intron MGP_129S1SvImJ_T0075321.1 MGP_129S1SvImJ_G0030257.1 mouse_genomes_project 5 142959680 142967801 - MGP_129S1SvImJ_P0075321 protein_coding protein_coding MGP_129S1SvImJ_T0075322.1 MGP_129S1SvImJ_G0030257.1 mouse_genomes_project 5 142963465 142966364 - protein_coding retained_intron MGP_129S1SvImJ_T0075323.1 MGP_129S1SvImJ_G0030257.1 mouse_genomes_project 5 142963861 142967249 - MGP_129S1SvImJ_P0075323 protein_coding protein_coding MGP_129S1SvImJ_T0075324.1 MGP_129S1SvImJ_G0030257.1 mouse_genomes_project 5 142964114 142965507 - protein_coding retained_intron MGP_129S1SvImJ_T0075325.1 MGP_129S1SvImJ_G0030257.1 mouse_genomes_project 5 142964283 142967000 - MGP_129S1SvImJ_P0075325 protein_coding protein_coding MGP_129S1SvImJ_T0075326.1 MGP_129S1SvImJ_G0030257.1 mouse_genomes_project 5 142964284 142967798 - MGP_129S1SvImJ_P0075326 protein_coding protein_coding MGP_129S1SvImJ_T0075327.1 MGP_129S1SvImJ_G0030257.1 mouse_genomes_project 5 142964614 142966644 - MGP_129S1SvImJ_P0075327 protein_coding protein_coding MGP_129S1SvImJ_T0075328.1 MGP_129S1SvImJ_G0030257.1 mouse_genomes_project 5 142965169 142967224 - MGP_129S1SvImJ_P0075328 protein_coding protein_coding MGP_129S1SvImJ_T0098603.1 MGP_129S1SvImJ_G0036688.1 mouse_genomes_project 5 64755711 64755830 + Gm25154 rRNA rRNA MGP_129S1SvImJ_T0101211.1 MGP_129S1SvImJ_G0039278.1 mouse_genomes_project 5 109963762 109963856 + Snord21 snoRNA snoRNA MGP_129S1SvImJ_T0015085.1 MGP_129S1SvImJ_G0013174.1 mouse_genomes_project 5 90512816 90513642 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0071644.1 MGP_129S1SvImJ_G0029543.1 mouse_genomes_project 5 51107591 51149208 - MGP_129S1SvImJ_P0071644 Dhx15 protein_coding protein_coding MGP_129S1SvImJ_T0071645.1 MGP_129S1SvImJ_G0029543.1 mouse_genomes_project 5 51108081 51149071 - MGP_129S1SvImJ_P0071645 Dhx15 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0071646.1 MGP_129S1SvImJ_G0029543.1 mouse_genomes_project 5 51110712 51115189 - Dhx15 protein_coding retained_intron MGP_129S1SvImJ_T0071647.1 MGP_129S1SvImJ_G0029543.1 mouse_genomes_project 5 51111114 51149183 - MGP_129S1SvImJ_P0071647 Dhx15 protein_coding protein_coding MGP_129S1SvImJ_T0071648.1 MGP_129S1SvImJ_G0029543.1 mouse_genomes_project 5 51116050 51119019 - Dhx15 protein_coding retained_intron MGP_129S1SvImJ_T0071649.1 MGP_129S1SvImJ_G0029543.1 mouse_genomes_project 5 51124142 51149188 - MGP_129S1SvImJ_P0071649 Dhx15 protein_coding protein_coding MGP_129S1SvImJ_T0071650.1 MGP_129S1SvImJ_G0029543.1 mouse_genomes_project 5 51143517 51146117 - Dhx15 protein_coding retained_intron MGP_129S1SvImJ_T0001678.1 MGP_129S1SvImJ_G0001594.1 mouse_genomes_project 5 66431155 66433673 + TEC TEC MGP_129S1SvImJ_T0073866.1 MGP_129S1SvImJ_G0030000.1 mouse_genomes_project 5 123429686 123517966 + MGP_129S1SvImJ_P0073866 Rbm19 protein_coding protein_coding MGP_129S1SvImJ_T0073867.1 MGP_129S1SvImJ_G0030000.1 mouse_genomes_project 5 123429738 123432203 + Rbm19 protein_coding retained_intron MGP_129S1SvImJ_T0073868.1 MGP_129S1SvImJ_G0030000.1 mouse_genomes_project 5 123429741 123517964 + MGP_129S1SvImJ_P0073868 Rbm19 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0073869.1 MGP_129S1SvImJ_G0030000.1 mouse_genomes_project 5 123431817 123433515 + Rbm19 protein_coding retained_intron MGP_129S1SvImJ_T0073870.1 MGP_129S1SvImJ_G0030000.1 mouse_genomes_project 5 123473867 123517956 + Rbm19 protein_coding processed_transcript MGP_129S1SvImJ_T0073871.1 MGP_129S1SvImJ_G0030000.1 mouse_genomes_project 5 123479743 123517178 + Rbm19 protein_coding processed_transcript MGP_129S1SvImJ_T0073872.1 MGP_129S1SvImJ_G0030000.1 mouse_genomes_project 5 123485386 123505225 + Rbm19 protein_coding processed_transcript MGP_129S1SvImJ_T0073873.1 MGP_129S1SvImJ_G0030000.1 mouse_genomes_project 5 123486980 123517962 + Rbm19 protein_coding processed_transcript MGP_129S1SvImJ_T0073874.1 MGP_129S1SvImJ_G0030000.1 mouse_genomes_project 5 123490169 123516975 + Rbm19 protein_coding processed_transcript MGP_129S1SvImJ_T0073875.1 MGP_129S1SvImJ_G0030000.1 mouse_genomes_project 5 123492794 123516954 + Rbm19 protein_coding processed_transcript MGP_129S1SvImJ_T0004805.1 MGP_129S1SvImJ_G0004149.1 mouse_genomes_project 5 117780962 117810657 + Hnf1aos1 antisense antisense MGP_129S1SvImJ_T0004807.1 MGP_129S1SvImJ_G0004149.1 mouse_genomes_project 5 117782075 117798309 + Hnf1aos1 antisense antisense MGP_129S1SvImJ_T0004808.1 MGP_129S1SvImJ_G0004149.1 mouse_genomes_project 5 117782098 117810850 + Hnf1aos1 antisense antisense MGP_129S1SvImJ_T0008153.1 MGP_129S1SvImJ_G0006649.1 mouse_genomes_project 5 60421080 60425792 - 1700014F14Rik lincRNA lincRNA MGP_129S1SvImJ_T0001756.1 MGP_129S1SvImJ_G0001671.1 mouse_genomes_project 5 103649500 103650537 - TEC TEC MGP_129S1SvImJ_T0075596.1 MGP_129S1SvImJ_G0030314.1 mouse_genomes_project 5 147804807 147855707 - MGP_129S1SvImJ_P0075596 Mmd2 protein_coding protein_coding MGP_129S1SvImJ_T0075597.1 MGP_129S1SvImJ_G0030314.1 mouse_genomes_project 5 147828239 147830115 - Mmd2 protein_coding retained_intron MGP_129S1SvImJ_T0075598.1 MGP_129S1SvImJ_G0030314.1 mouse_genomes_project 5 147829541 147855707 - Mmd2 protein_coding processed_transcript MGP_129S1SvImJ_T0015021.1 MGP_129S1SvImJ_G0013110.1 mouse_genomes_project 5 61532109 61532725 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018291.1 MGP_129S1SvImJ_G0015631.1 mouse_genomes_project 6 51486425 51491826 + Hoxa11os processed_transcript antisense MGP_129S1SvImJ_T0018292.1 MGP_129S1SvImJ_G0015631.1 mouse_genomes_project 6 51487276 51491804 + Hoxa11os processed_transcript antisense MGP_129S1SvImJ_T0018293.1 MGP_129S1SvImJ_G0015631.1 mouse_genomes_project 6 51488003 51491830 + Hoxa11os processed_transcript antisense MGP_129S1SvImJ_T0018294.1 MGP_129S1SvImJ_G0015631.1 mouse_genomes_project 6 51488023 51491825 + Hoxa11os processed_transcript antisense MGP_129S1SvImJ_T0018295.1 MGP_129S1SvImJ_G0015631.1 mouse_genomes_project 6 51488255 51491415 + Hoxa11os processed_transcript retained_intron MGP_129S1SvImJ_T0018296.1 MGP_129S1SvImJ_G0015631.1 mouse_genomes_project 6 51490456 51491834 + Hoxa11os processed_transcript antisense MGP_129S1SvImJ_T0080567.1 MGP_129S1SvImJ_G0031407.1 mouse_genomes_project 6 138992036 139079461 - MGP_129S1SvImJ_P0080567 Dusp16 protein_coding protein_coding MGP_129S1SvImJ_T0080568.1 MGP_129S1SvImJ_G0031407.1 mouse_genomes_project 6 138992041 139079611 - MGP_129S1SvImJ_P0080568 Dusp16 protein_coding protein_coding MGP_129S1SvImJ_T0080569.1 MGP_129S1SvImJ_G0031407.1 mouse_genomes_project 6 138994383 139041170 - MGP_129S1SvImJ_P0080569 Dusp16 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080570.1 MGP_129S1SvImJ_G0031407.1 mouse_genomes_project 6 138995338 139002629 - Dusp16 protein_coding retained_intron MGP_129S1SvImJ_T0080571.1 MGP_129S1SvImJ_G0031407.1 mouse_genomes_project 6 138995490 139023060 - Dusp16 protein_coding processed_transcript MGP_129S1SvImJ_T0080572.1 MGP_129S1SvImJ_G0031407.1 mouse_genomes_project 6 138997147 139037954 - MGP_129S1SvImJ_P0080572 Dusp16 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080573.1 MGP_129S1SvImJ_G0031407.1 mouse_genomes_project 6 139016253 139078300 - MGP_129S1SvImJ_P0080573 Dusp16 protein_coding protein_coding MGP_129S1SvImJ_T0005108.1 MGP_129S1SvImJ_G0004361.1 mouse_genomes_project 6 130588320 130590399 + antisense antisense MGP_129S1SvImJ_T0000199.1 MGP_129S1SvImJ_G0000154.1 mouse_genomes_project 6 70104529 70105053 - MGP_129S1SvImJ_P0000199 Igkv12-44 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0002064.1 MGP_129S1SvImJ_G0001977.1 mouse_genomes_project 6 84423117 84426664 - TEC TEC MGP_129S1SvImJ_T0004919.1 MGP_129S1SvImJ_G0004229.1 mouse_genomes_project 6 2835836 2850972 - 1700019G24Rik antisense antisense MGP_129S1SvImJ_T0002108.1 MGP_129S1SvImJ_G0002021.1 mouse_genomes_project 6 93502017 93503035 - TEC TEC MGP_129S1SvImJ_T0002151.1 MGP_129S1SvImJ_G0002064.1 mouse_genomes_project 6 119840994 119842884 + TEC TEC MGP_129S1SvImJ_T0077732.1 MGP_129S1SvImJ_G0030782.1 mouse_genomes_project 6 56296045 56344031 + MGP_129S1SvImJ_P0077732 Fkbp9 protein_coding protein_coding MGP_129S1SvImJ_T0077733.1 MGP_129S1SvImJ_G0030782.1 mouse_genomes_project 6 56312696 56314030 + Fkbp9 protein_coding retained_intron MGP_129S1SvImJ_T0015558.1 MGP_129S1SvImJ_G0013647.1 mouse_genomes_project 6 115019449 115021015 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002720.1 MGP_129S1SvImJ_G0002597.1 mouse_genomes_project 6 40066486 40067167 - MGP_129S1SvImJ_P0002720 Trbv31 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002721.1 MGP_129S1SvImJ_G0002597.1 mouse_genomes_project 6 40066488 40067248 - MGP_129S1SvImJ_P0002721 Trbv31 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0015680.1 MGP_129S1SvImJ_G0013769.1 mouse_genomes_project 6 151806472 151807968 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015606.1 MGP_129S1SvImJ_G0013695.1 mouse_genomes_project 6 127556225 127556543 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000229.1 MGP_129S1SvImJ_G0000176.1 mouse_genomes_project 6 70806020 70807493 - MGP_129S1SvImJ_P0000229 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0010785.1 MGP_129S1SvImJ_G0008901.1 mouse_genomes_project 6 49694490 49694601 + Mir6371 miRNA miRNA MGP_129S1SvImJ_T0008717.1 MGP_129S1SvImJ_G0007047.1 mouse_genomes_project 6 119858787 119860823 + D030044L04Rik lincRNA lincRNA MGP_129S1SvImJ_T0077778.1 MGP_129S1SvImJ_G0030805.1 mouse_genomes_project 6 57369892 57370927 - MGP_129S1SvImJ_P0077778 Vmn1r21 protein_coding protein_coding MGP_129S1SvImJ_T0077779.1 MGP_129S1SvImJ_G0030805.1 mouse_genomes_project 6 57370563 57376781 - MGP_129S1SvImJ_P0077779 Vmn1r21 protein_coding protein_coding MGP_129S1SvImJ_T0077780.1 MGP_129S1SvImJ_G0030805.1 mouse_genomes_project 6 57370570 57376783 - MGP_129S1SvImJ_P0077780 Vmn1r21 protein_coding protein_coding MGP_129S1SvImJ_T0015386.1 MGP_129S1SvImJ_G0013475.1 mouse_genomes_project 6 58834128 58834332 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077702.1 MGP_129S1SvImJ_G0030776.1 mouse_genomes_project 6 55267688 55413740 + MGP_129S1SvImJ_P0077702 Ccdc129 protein_coding protein_coding MGP_129S1SvImJ_T0077703.1 MGP_129S1SvImJ_G0030776.1 mouse_genomes_project 6 55322393 55413853 + Ccdc129 protein_coding processed_transcript MGP_129S1SvImJ_T0077260.1 MGP_129S1SvImJ_G0030670.1 mouse_genomes_project 6 41749766 41750766 + MGP_129S1SvImJ_P0077260 Olfr237-ps1 protein_coding protein_coding MGP_129S1SvImJ_T0008769.1 MGP_129S1SvImJ_G0007085.1 mouse_genomes_project 6 144231127 144234123 - Gm44272 lincRNA lincRNA MGP_129S1SvImJ_T0102602.1 MGP_129S1SvImJ_G0040435.1 mouse_genomes_project 6 41254257 41254605 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0078649.1 MGP_129S1SvImJ_G0030989.1 mouse_genomes_project 6 88696267 88701561 - MGP_129S1SvImJ_P0078649 Gkn1 protein_coding protein_coding MGP_129S1SvImJ_T0077755.1 MGP_129S1SvImJ_G0030794.1 mouse_genomes_project 6 56762473 56763373 + MGP_129S1SvImJ_P0077755 Vmn1r15 protein_coding protein_coding MGP_129S1SvImJ_T0015308.1 MGP_129S1SvImJ_G0013397.1 mouse_genomes_project 6 27577864 27578229 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001981.1 MGP_129S1SvImJ_G0001894.1 mouse_genomes_project 6 43775521 43777927 + TEC TEC MGP_129S1SvImJ_T0002109.1 MGP_129S1SvImJ_G0002022.1 mouse_genomes_project 6 93564920 93566169 - TEC TEC MGP_129S1SvImJ_T0078962.1 MGP_129S1SvImJ_G0031054.1 mouse_genomes_project 6 93605334 93706654 + MGP_129S1SvImJ_P0078962 Fgd5 protein_coding protein_coding MGP_129S1SvImJ_T0078963.1 MGP_129S1SvImJ_G0031054.1 mouse_genomes_project 6 93698073 93706651 + Fgd5 protein_coding retained_intron MGP_129S1SvImJ_T0078964.1 MGP_129S1SvImJ_G0031054.1 mouse_genomes_project 6 93701832 93704862 + Fgd5 protein_coding retained_intron MGP_129S1SvImJ_T0015313.1 MGP_129S1SvImJ_G0013402.1 mouse_genomes_project 6 31261014 31261786 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077786.1 MGP_129S1SvImJ_G0030811.1 mouse_genomes_project 6 57551491 57552511 - MGP_129S1SvImJ_P0077786 Vmn1r26 protein_coding protein_coding MGP_129S1SvImJ_T0077829.1 MGP_129S1SvImJ_G0030824.1 mouse_genomes_project 6 60507195 60508290 - MGP_129S1SvImJ_P0077829 Mageb16 protein_coding protein_coding MGP_129S1SvImJ_T0076755.1 MGP_129S1SvImJ_G0030539.1 mouse_genomes_project 6 28437301 28465026 + MGP_129S1SvImJ_P0076755 Cpa2 protein_coding protein_coding MGP_129S1SvImJ_T0076756.1 MGP_129S1SvImJ_G0030539.1 mouse_genomes_project 6 28437361 28440192 + Cpa2 protein_coding retained_intron MGP_129S1SvImJ_T0076757.1 MGP_129S1SvImJ_G0030539.1 mouse_genomes_project 6 28437389 28442830 + Cpa2 protein_coding processed_transcript MGP_129S1SvImJ_T0076758.1 MGP_129S1SvImJ_G0030539.1 mouse_genomes_project 6 28438927 28440712 + Cpa2 protein_coding retained_intron MGP_129S1SvImJ_T0076759.1 MGP_129S1SvImJ_G0030539.1 mouse_genomes_project 6 28439635 28449365 + Cpa2 protein_coding retained_intron MGP_129S1SvImJ_T0076760.1 MGP_129S1SvImJ_G0030539.1 mouse_genomes_project 6 28440204 28446601 + Cpa2 protein_coding retained_intron MGP_129S1SvImJ_T0076761.1 MGP_129S1SvImJ_G0030539.1 mouse_genomes_project 6 28442361 28442875 + Cpa2 protein_coding processed_transcript MGP_129S1SvImJ_T0076762.1 MGP_129S1SvImJ_G0030539.1 mouse_genomes_project 6 28449211 28464798 + Cpa2 protein_coding retained_intron MGP_129S1SvImJ_T0078335.1 MGP_129S1SvImJ_G0030931.1 mouse_genomes_project 6 84373926 84462434 - MGP_129S1SvImJ_P0078335 Tet3 protein_coding protein_coding MGP_129S1SvImJ_T0078336.1 MGP_129S1SvImJ_G0030931.1 mouse_genomes_project 6 84404183 84447327 - Tet3 protein_coding processed_transcript MGP_129S1SvImJ_T0078337.1 MGP_129S1SvImJ_G0030931.1 mouse_genomes_project 6 84410126 84464598 - MGP_129S1SvImJ_P0078337 Tet3 protein_coding protein_coding MGP_129S1SvImJ_T0078338.1 MGP_129S1SvImJ_G0030931.1 mouse_genomes_project 6 84442441 84447281 - Tet3 protein_coding retained_intron MGP_129S1SvImJ_T0004984.1 MGP_129S1SvImJ_G0004276.1 mouse_genomes_project 6 53814776 53824586 - Gm44026 antisense antisense MGP_129S1SvImJ_T0008637.1 MGP_129S1SvImJ_G0006984.1 mouse_genomes_project 6 71811758 71812408 - Gm44110 lincRNA lincRNA MGP_129S1SvImJ_T0101241.1 MGP_129S1SvImJ_G0039308.1 mouse_genomes_project 6 45251464 45251596 - Gm25161 snoRNA snoRNA MGP_129S1SvImJ_T0015520.1 MGP_129S1SvImJ_G0013609.1 mouse_genomes_project 6 97029774 97030125 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002074.1 MGP_129S1SvImJ_G0001987.1 mouse_genomes_project 6 88189301 88192111 + TEC TEC MGP_129S1SvImJ_T0015369.1 MGP_129S1SvImJ_G0013458.1 mouse_genomes_project 6 50118033 50118271 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004971.1 MGP_129S1SvImJ_G0004269.1 mouse_genomes_project 6 51390000 51391627 + Hotairm1 antisense antisense MGP_129S1SvImJ_T0004972.1 MGP_129S1SvImJ_G0004269.1 mouse_genomes_project 6 51391530 51397537 + Hotairm1 antisense antisense MGP_129S1SvImJ_T0004973.1 MGP_129S1SvImJ_G0004269.1 mouse_genomes_project 6 51391622 51397438 + Hotairm1 antisense antisense MGP_129S1SvImJ_T0008692.1 MGP_129S1SvImJ_G0007027.1 mouse_genomes_project 6 100432197 100450368 - Gm44197 lincRNA lincRNA MGP_129S1SvImJ_T0002180.1 MGP_129S1SvImJ_G0002092.1 mouse_genomes_project 6 138325760 138328637 + TEC TEC MGP_129S1SvImJ_T0080487.1 MGP_129S1SvImJ_G0031364.1 mouse_genomes_project 6 133994085 134011768 - MGP_129S1SvImJ_P0080487 Klra7 protein_coding protein_coding MGP_129S1SvImJ_T0076524.1 MGP_129S1SvImJ_G0030501.1 mouse_genomes_project 6 22422278 22454753 + MGP_129S1SvImJ_P0076524 Hyal5 protein_coding protein_coding MGP_129S1SvImJ_T0076525.1 MGP_129S1SvImJ_G0030501.1 mouse_genomes_project 6 22440677 22454600 + MGP_129S1SvImJ_P0076525 Hyal5 protein_coding protein_coding MGP_129S1SvImJ_T0076526.1 MGP_129S1SvImJ_G0030501.1 mouse_genomes_project 6 22453331 22454540 + Hyal5 protein_coding processed_transcript MGP_129S1SvImJ_T0076950.1 MGP_129S1SvImJ_G0030574.1 mouse_genomes_project 6 34889502 34990942 - MGP_129S1SvImJ_P0076950 Ptn protein_coding protein_coding MGP_129S1SvImJ_T0076951.1 MGP_129S1SvImJ_G0030574.1 mouse_genomes_project 6 34914188 34990901 - MGP_129S1SvImJ_P0076951 Ptn protein_coding protein_coding MGP_129S1SvImJ_T0101236.1 MGP_129S1SvImJ_G0039303.1 mouse_genomes_project 6 34126555 34126690 + Gm23273 snoRNA snoRNA MGP_129S1SvImJ_T0080928.1 MGP_129S1SvImJ_G0031476.1 mouse_genomes_project 6 150089180 150158041 + MGP_129S1SvImJ_P0080928 Lrmp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080929.1 MGP_129S1SvImJ_G0031476.1 mouse_genomes_project 6 150095239 150158047 + MGP_129S1SvImJ_P0080929 Lrmp protein_coding protein_coding MGP_129S1SvImJ_T0080930.1 MGP_129S1SvImJ_G0031476.1 mouse_genomes_project 6 150095242 150152027 + Lrmp protein_coding retained_intron MGP_129S1SvImJ_T0080931.1 MGP_129S1SvImJ_G0031476.1 mouse_genomes_project 6 150095281 150140959 + Lrmp protein_coding retained_intron MGP_129S1SvImJ_T0080932.1 MGP_129S1SvImJ_G0031476.1 mouse_genomes_project 6 150114918 150140383 + MGP_129S1SvImJ_P0080932 Lrmp protein_coding protein_coding MGP_129S1SvImJ_T0080933.1 MGP_129S1SvImJ_G0031476.1 mouse_genomes_project 6 150122810 150137496 + Lrmp protein_coding retained_intron MGP_129S1SvImJ_T0080934.1 MGP_129S1SvImJ_G0031476.1 mouse_genomes_project 6 150122810 150140972 + MGP_129S1SvImJ_P0080934 Lrmp protein_coding protein_coding MGP_129S1SvImJ_T0080935.1 MGP_129S1SvImJ_G0031476.1 mouse_genomes_project 6 150122813 150158041 + MGP_129S1SvImJ_P0080935 Lrmp protein_coding protein_coding MGP_129S1SvImJ_T0080936.1 MGP_129S1SvImJ_G0031476.1 mouse_genomes_project 6 150136586 150154820 + Lrmp protein_coding processed_transcript MGP_129S1SvImJ_T0080937.1 MGP_129S1SvImJ_G0031476.1 mouse_genomes_project 6 150152620 150157790 + Lrmp protein_coding retained_intron MGP_129S1SvImJ_T0076697.1 MGP_129S1SvImJ_G0030532.1 mouse_genomes_project 6 27755495 27799900 + MGP_129S1SvImJ_P0076697 Strip2 protein_coding protein_coding MGP_129S1SvImJ_T0076698.1 MGP_129S1SvImJ_G0030532.1 mouse_genomes_project 6 27755496 27784020 + Strip2 protein_coding retained_intron MGP_129S1SvImJ_T0076699.1 MGP_129S1SvImJ_G0030532.1 mouse_genomes_project 6 27755496 27797997 + Strip2 protein_coding retained_intron MGP_129S1SvImJ_T0076700.1 MGP_129S1SvImJ_G0030532.1 mouse_genomes_project 6 27755496 27799906 + MGP_129S1SvImJ_P0076700 Strip2 protein_coding protein_coding MGP_129S1SvImJ_T0076701.1 MGP_129S1SvImJ_G0030532.1 mouse_genomes_project 6 27755496 27785542 + MGP_129S1SvImJ_P0076701 Strip2 protein_coding protein_coding MGP_129S1SvImJ_T0080802.1 MGP_129S1SvImJ_G0031450.1 mouse_genomes_project 6 145471594 145499917 + MGP_129S1SvImJ_P0080802 Gm11077 protein_coding protein_coding MGP_129S1SvImJ_T0011658.1 MGP_129S1SvImJ_G0009774.1 mouse_genomes_project 6 46685622 46685724 + Rny3 misc_RNA misc_RNA MGP_129S1SvImJ_T0010820.1 MGP_129S1SvImJ_G0008936.1 mouse_genomes_project 6 120824136 120824208 + Mir7044 miRNA miRNA MGP_129S1SvImJ_T0002051.1 MGP_129S1SvImJ_G0001964.1 mouse_genomes_project 6 80904456 80907110 + TEC TEC MGP_129S1SvImJ_T0015590.1 MGP_129S1SvImJ_G0013679.1 mouse_genomes_project 6 124585595 124586345 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000221.1 MGP_129S1SvImJ_G0000171.1 mouse_genomes_project 6 70529378 70787200 - MGP_129S1SvImJ_P0000221 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000223.1 MGP_129S1SvImJ_G0000171.1 mouse_genomes_project 6 70529378 70787185 - MGP_129S1SvImJ_P0000223 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0077825.1 MGP_129S1SvImJ_G0030821.1 mouse_genomes_project 6 58848911 58852075 + MGP_129S1SvImJ_P0077825 Tigd2 protein_coding protein_coding MGP_129S1SvImJ_T0076791.1 MGP_129S1SvImJ_G0030545.1 mouse_genomes_project 6 28651817 28794631 - MGP_129S1SvImJ_P0076791 Copg2 protein_coding protein_coding MGP_129S1SvImJ_T0076792.1 MGP_129S1SvImJ_G0030545.1 mouse_genomes_project 6 28652675 28794686 - MGP_129S1SvImJ_P0076792 Copg2 protein_coding protein_coding MGP_129S1SvImJ_T0076793.1 MGP_129S1SvImJ_G0030545.1 mouse_genomes_project 6 28708002 28794602 - Copg2 protein_coding processed_transcript MGP_129S1SvImJ_T0076794.1 MGP_129S1SvImJ_G0030545.1 mouse_genomes_project 6 28708492 28794656 - Copg2 protein_coding processed_transcript MGP_129S1SvImJ_T0076795.1 MGP_129S1SvImJ_G0030545.1 mouse_genomes_project 6 28744557 28794622 - Copg2 protein_coding processed_transcript MGP_129S1SvImJ_T0076796.1 MGP_129S1SvImJ_G0030545.1 mouse_genomes_project 6 28744933 28794318 - Copg2 protein_coding processed_transcript MGP_129S1SvImJ_T0076797.1 MGP_129S1SvImJ_G0030545.1 mouse_genomes_project 6 28792794 28794329 - Copg2 protein_coding processed_transcript MGP_129S1SvImJ_T0076798.1 MGP_129S1SvImJ_G0030545.1 mouse_genomes_project 6 28794012 28794640 - Copg2 protein_coding processed_transcript MGP_129S1SvImJ_T0002054.1 MGP_129S1SvImJ_G0001967.1 mouse_genomes_project 6 81181544 81183300 + TEC TEC MGP_129S1SvImJ_T0102614.1 MGP_129S1SvImJ_G0040447.1 mouse_genomes_project 6 57538010 57538144 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015529.1 MGP_129S1SvImJ_G0013618.1 mouse_genomes_project 6 101815347 101815954 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015614.1 MGP_129S1SvImJ_G0013703.1 mouse_genomes_project 6 130406446 130407340 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002128.1 MGP_129S1SvImJ_G0002041.1 mouse_genomes_project 6 103441009 103441968 - TEC TEC MGP_129S1SvImJ_T0077991.1 MGP_129S1SvImJ_G0030862.1 mouse_genomes_project 6 72202736 72313892 + MGP_129S1SvImJ_P0077991 Reep1 protein_coding protein_coding MGP_129S1SvImJ_T0079961.1 MGP_129S1SvImJ_G0031243.1 mouse_genomes_project 6 126414583 126427415 + MGP_129S1SvImJ_P0079961 Clec4d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079962.1 MGP_129S1SvImJ_G0031243.1 mouse_genomes_project 6 126414589 126427757 + MGP_129S1SvImJ_P0079962 Clec4d protein_coding protein_coding MGP_129S1SvImJ_T0079963.1 MGP_129S1SvImJ_G0031243.1 mouse_genomes_project 6 126420194 126427204 + Clec4d protein_coding retained_intron MGP_129S1SvImJ_T0015263.1 MGP_129S1SvImJ_G0013352.1 mouse_genomes_project 6 4727246 4727629 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099049.1 MGP_129S1SvImJ_G0037117.1 mouse_genomes_project 6 93122187 93133479 + Gm45216 sense_overlapping sense_overlapping MGP_129S1SvImJ_T0077248.1 MGP_129S1SvImJ_G0030662.1 mouse_genomes_project 6 41331361 41332254 + MGP_129S1SvImJ_P0077248 protein_coding protein_coding MGP_129S1SvImJ_T0015480.1 MGP_129S1SvImJ_G0013569.1 mouse_genomes_project 6 83946986 83947344 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002171.1 MGP_129S1SvImJ_G0002083.1 mouse_genomes_project 6 131960655 131961122 + TEC TEC MGP_129S1SvImJ_T0076834.1 MGP_129S1SvImJ_G0030553.1 mouse_genomes_project 6 31262803 32018453 + MGP_129S1SvImJ_P0076834 Exoc4 protein_coding protein_coding MGP_129S1SvImJ_T0076835.1 MGP_129S1SvImJ_G0030553.1 mouse_genomes_project 6 31262846 31366088 + Exoc4 protein_coding retained_intron MGP_129S1SvImJ_T0076836.1 MGP_129S1SvImJ_G0030553.1 mouse_genomes_project 6 31262846 31849179 + Exoc4 protein_coding processed_transcript MGP_129S1SvImJ_T0076837.1 MGP_129S1SvImJ_G0030553.1 mouse_genomes_project 6 31262846 31500432 + MGP_129S1SvImJ_P0076837 Exoc4 protein_coding protein_coding MGP_129S1SvImJ_T0076838.1 MGP_129S1SvImJ_G0030553.1 mouse_genomes_project 6 31262850 31604377 + MGP_129S1SvImJ_P0076838 Exoc4 protein_coding protein_coding MGP_129S1SvImJ_T0076839.1 MGP_129S1SvImJ_G0030553.1 mouse_genomes_project 6 31262854 31334085 + Exoc4 protein_coding processed_transcript MGP_129S1SvImJ_T0076840.1 MGP_129S1SvImJ_G0030553.1 mouse_genomes_project 6 31347656 31527995 + Exoc4 protein_coding processed_transcript MGP_129S1SvImJ_T0076841.1 MGP_129S1SvImJ_G0030553.1 mouse_genomes_project 6 31348718 31363250 + Exoc4 protein_coding retained_intron MGP_129S1SvImJ_T0076842.1 MGP_129S1SvImJ_G0030553.1 mouse_genomes_project 6 31727745 31895056 + Exoc4 protein_coding processed_transcript MGP_129S1SvImJ_T0076843.1 MGP_129S1SvImJ_G0030553.1 mouse_genomes_project 6 31894995 31907042 + Exoc4 protein_coding processed_transcript MGP_129S1SvImJ_T0076448.1 MGP_129S1SvImJ_G0030481.1 mouse_genomes_project 6 19419617 19445946 + MGP_129S1SvImJ_P0076448 Ing3 protein_coding protein_coding MGP_129S1SvImJ_T0076449.1 MGP_129S1SvImJ_G0030481.1 mouse_genomes_project 6 19419697 19444438 + Ing3 protein_coding retained_intron MGP_129S1SvImJ_T0076450.1 MGP_129S1SvImJ_G0030481.1 mouse_genomes_project 6 19419702 19444039 + MGP_129S1SvImJ_P0076450 Ing3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076451.1 MGP_129S1SvImJ_G0030481.1 mouse_genomes_project 6 19419705 19444811 + MGP_129S1SvImJ_P0076451 Ing3 protein_coding protein_coding MGP_129S1SvImJ_T0076452.1 MGP_129S1SvImJ_G0030481.1 mouse_genomes_project 6 19419718 19439972 + MGP_129S1SvImJ_P0076452 Ing3 protein_coding protein_coding MGP_129S1SvImJ_T0076453.1 MGP_129S1SvImJ_G0030481.1 mouse_genomes_project 6 19419733 19443634 + MGP_129S1SvImJ_P0076453 Ing3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076454.1 MGP_129S1SvImJ_G0030481.1 mouse_genomes_project 6 19420068 19437596 + MGP_129S1SvImJ_P0076454 Ing3 protein_coding protein_coding MGP_129S1SvImJ_T0076455.1 MGP_129S1SvImJ_G0030481.1 mouse_genomes_project 6 19422105 19424305 + Ing3 protein_coding retained_intron MGP_129S1SvImJ_T0010764.1 MGP_129S1SvImJ_G0008880.1 mouse_genomes_project 6 15755114 15755184 - Gm26233 miRNA miRNA MGP_129S1SvImJ_T0002200.1 MGP_129S1SvImJ_G0002112.1 mouse_genomes_project 6 150222774 150225335 - TEC TEC MGP_129S1SvImJ_T0008640.1 MGP_129S1SvImJ_G0006987.1 mouse_genomes_project 6 71932776 71939738 + Gm44172 lincRNA lincRNA MGP_129S1SvImJ_T0015689.1 MGP_129S1SvImJ_G0013778.1 mouse_genomes_project 6 154186705 154187640 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102597.1 MGP_129S1SvImJ_G0040430.1 mouse_genomes_project 6 39853713 39859967 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0077787.1 MGP_129S1SvImJ_G0030812.1 mouse_genomes_project 6 57763244 57764408 - MGP_129S1SvImJ_P0077787 protein_coding protein_coding MGP_129S1SvImJ_T0000322.1 MGP_129S1SvImJ_G0000264.1 mouse_genomes_project 6 69129417 69129813 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0077463.1 MGP_129S1SvImJ_G0030721.1 mouse_genomes_project 6 48070292 48213247 - MGP_129S1SvImJ_P0077463 Igf2bp3 protein_coding protein_coding MGP_129S1SvImJ_T0077464.1 MGP_129S1SvImJ_G0030721.1 mouse_genomes_project 6 48073191 48079275 - Igf2bp3 protein_coding retained_intron MGP_129S1SvImJ_T0077465.1 MGP_129S1SvImJ_G0030721.1 mouse_genomes_project 6 48078174 48212451 - Igf2bp3 protein_coding retained_intron MGP_129S1SvImJ_T0077466.1 MGP_129S1SvImJ_G0030721.1 mouse_genomes_project 6 48094232 48097933 - Igf2bp3 protein_coding processed_transcript MGP_129S1SvImJ_T0077467.1 MGP_129S1SvImJ_G0030721.1 mouse_genomes_project 6 48158072 48212994 - Igf2bp3 protein_coding processed_transcript MGP_129S1SvImJ_T0077553.1 MGP_129S1SvImJ_G0030740.1 mouse_genomes_project 6 51398768 51454499 - MGP_129S1SvImJ_P0077553 Gm28308 protein_coding protein_coding MGP_129S1SvImJ_T0077552.1 MGP_129S1SvImJ_G0030739.1 mouse_genomes_project 6 51397826 51400241 - MGP_129S1SvImJ_P0077552 Hoxa2 protein_coding protein_coding MGP_129S1SvImJ_T0002175.1 MGP_129S1SvImJ_G0002087.1 mouse_genomes_project 6 133209932 133210624 + TEC TEC MGP_129S1SvImJ_T0078311.1 MGP_129S1SvImJ_G0030927.1 mouse_genomes_project 6 84229865 84308270 + MGP_129S1SvImJ_P0078311 Slc4a5 protein_coding protein_coding MGP_129S1SvImJ_T0078312.1 MGP_129S1SvImJ_G0030927.1 mouse_genomes_project 6 84242317 84266166 + Slc4a5 protein_coding processed_transcript MGP_129S1SvImJ_T0078313.1 MGP_129S1SvImJ_G0030927.1 mouse_genomes_project 6 84282081 84293234 + Slc4a5 protein_coding processed_transcript MGP_129S1SvImJ_T0078314.1 MGP_129S1SvImJ_G0030927.1 mouse_genomes_project 6 84292413 84301518 + Slc4a5 protein_coding processed_transcript MGP_129S1SvImJ_T0011671.1 MGP_129S1SvImJ_G0009787.1 mouse_genomes_project 6 51507755 51508133 + Gm27985 misc_RNA misc_RNA MGP_129S1SvImJ_T0077586.1 MGP_129S1SvImJ_G0030752.1 mouse_genomes_project 6 51821396 51921996 - MGP_129S1SvImJ_P0077586 Hibadh protein_coding protein_coding MGP_129S1SvImJ_T0077587.1 MGP_129S1SvImJ_G0030752.1 mouse_genomes_project 6 51821864 51907347 - Hibadh protein_coding retained_intron MGP_129S1SvImJ_T0077588.1 MGP_129S1SvImJ_G0030752.1 mouse_genomes_project 6 51824020 51833246 - Hibadh protein_coding retained_intron MGP_129S1SvImJ_T0077589.1 MGP_129S1SvImJ_G0030752.1 mouse_genomes_project 6 51830744 51832848 - Hibadh protein_coding retained_intron MGP_129S1SvImJ_T0077590.1 MGP_129S1SvImJ_G0030752.1 mouse_genomes_project 6 51913807 51921922 - Hibadh protein_coding retained_intron MGP_129S1SvImJ_T0080824.1 MGP_129S1SvImJ_G0031457.1 mouse_genomes_project 6 146763019 146804374 - MGP_129S1SvImJ_P0080824 Gm6614 protein_coding protein_coding MGP_129S1SvImJ_T0080825.1 MGP_129S1SvImJ_G0031457.1 mouse_genomes_project 6 146763019 146804374 - MGP_129S1SvImJ_P0080825 Gm6614 protein_coding protein_coding MGP_129S1SvImJ_T0080826.1 MGP_129S1SvImJ_G0031457.1 mouse_genomes_project 6 146763370 146801705 - MGP_129S1SvImJ_P0080826 Gm6614 protein_coding protein_coding MGP_129S1SvImJ_T0078438.1 MGP_129S1SvImJ_G0030947.1 mouse_genomes_project 6 86228700 86247343 - protein_coding lincRNA MGP_129S1SvImJ_T0008595.1 MGP_129S1SvImJ_G0006952.1 mouse_genomes_project 6 47831042 47836802 + Gm7932 lincRNA lincRNA MGP_129S1SvImJ_T0008596.1 MGP_129S1SvImJ_G0006952.1 mouse_genomes_project 6 47831137 47835163 + Gm7932 lincRNA lincRNA MGP_129S1SvImJ_T0008728.1 MGP_129S1SvImJ_G0007054.1 mouse_genomes_project 6 120989322 120991080 - 1700069P05Rik lincRNA lincRNA MGP_129S1SvImJ_T0078653.1 MGP_129S1SvImJ_G0030993.1 mouse_genomes_project 6 88805392 88847884 - Arhgap25 protein_coding retained_intron MGP_129S1SvImJ_T0078654.1 MGP_129S1SvImJ_G0030993.1 mouse_genomes_project 6 88805392 88885718 - MGP_129S1SvImJ_P0078654 Arhgap25 protein_coding protein_coding MGP_129S1SvImJ_T0078655.1 MGP_129S1SvImJ_G0030993.1 mouse_genomes_project 6 88806258 88847818 - MGP_129S1SvImJ_P0078655 Arhgap25 protein_coding protein_coding MGP_129S1SvImJ_T0078656.1 MGP_129S1SvImJ_G0030993.1 mouse_genomes_project 6 88806982 88810514 - Arhgap25 protein_coding retained_intron MGP_129S1SvImJ_T0015650.1 MGP_129S1SvImJ_G0013739.1 mouse_genomes_project 6 136862911 136863182 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002194.1 MGP_129S1SvImJ_G0002106.1 mouse_genomes_project 6 145015948 145016618 + TEC TEC MGP_129S1SvImJ_T0018284.1 MGP_129S1SvImJ_G0015628.1 mouse_genomes_project 6 47695742 47698013 - Gimap1os processed_transcript antisense MGP_129S1SvImJ_T0018285.1 MGP_129S1SvImJ_G0015628.1 mouse_genomes_project 6 47696892 47698836 - Gimap1os processed_transcript retained_intron MGP_129S1SvImJ_T0005104.1 MGP_129S1SvImJ_G0004358.1 mouse_genomes_project 6 128844560 128847876 + Gm28809 antisense antisense MGP_129S1SvImJ_T0005105.1 MGP_129S1SvImJ_G0004358.1 mouse_genomes_project 6 128845141 128846765 + Gm28809 antisense antisense MGP_129S1SvImJ_T0076803.1 MGP_129S1SvImJ_G0030548.1 mouse_genomes_project 6 29318486 29451493 + MGP_129S1SvImJ_P0076803 Mkln1 protein_coding protein_coding MGP_129S1SvImJ_T0076804.1 MGP_129S1SvImJ_G0030548.1 mouse_genomes_project 6 29318579 29405618 + Mkln1 protein_coding retained_intron MGP_129S1SvImJ_T0076805.1 MGP_129S1SvImJ_G0030548.1 mouse_genomes_project 6 29318580 29365222 + Mkln1 protein_coding retained_intron MGP_129S1SvImJ_T0076806.1 MGP_129S1SvImJ_G0030548.1 mouse_genomes_project 6 29318587 29343684 + Mkln1 protein_coding retained_intron MGP_129S1SvImJ_T0076807.1 MGP_129S1SvImJ_G0030548.1 mouse_genomes_project 6 29318596 29328725 + Mkln1 protein_coding retained_intron MGP_129S1SvImJ_T0076808.1 MGP_129S1SvImJ_G0030548.1 mouse_genomes_project 6 29318596 29355103 + Mkln1 protein_coding retained_intron MGP_129S1SvImJ_T0076809.1 MGP_129S1SvImJ_G0030548.1 mouse_genomes_project 6 29318610 29362336 + Mkln1 protein_coding processed_transcript MGP_129S1SvImJ_T0076810.1 MGP_129S1SvImJ_G0030548.1 mouse_genomes_project 6 29354917 29424126 + Mkln1 protein_coding processed_transcript MGP_129S1SvImJ_T0076811.1 MGP_129S1SvImJ_G0030548.1 mouse_genomes_project 6 29354951 29409104 + Mkln1 protein_coding processed_transcript MGP_129S1SvImJ_T0076812.1 MGP_129S1SvImJ_G0030548.1 mouse_genomes_project 6 29402848 29427408 + Mkln1 protein_coding retained_intron MGP_129S1SvImJ_T0076813.1 MGP_129S1SvImJ_G0030548.1 mouse_genomes_project 6 29411586 29415191 + Mkln1 protein_coding retained_intron MGP_129S1SvImJ_T0076814.1 MGP_129S1SvImJ_G0030548.1 mouse_genomes_project 6 29424108 29442601 + MGP_129S1SvImJ_P0076814 Mkln1 protein_coding protein_coding MGP_129S1SvImJ_T0076815.1 MGP_129S1SvImJ_G0030548.1 mouse_genomes_project 6 29427335 29442480 + Mkln1 protein_coding retained_intron MGP_129S1SvImJ_T0002186.1 MGP_129S1SvImJ_G0002098.1 mouse_genomes_project 6 141330192 141330700 - TEC TEC MGP_129S1SvImJ_T0078878.1 MGP_129S1SvImJ_G0031040.1 mouse_genomes_project 6 92151248 92192932 + MGP_129S1SvImJ_P0078878 Slc41a3 protein_coding protein_coding MGP_129S1SvImJ_T0078879.1 MGP_129S1SvImJ_G0031040.1 mouse_genomes_project 6 92165666 92192932 + MGP_129S1SvImJ_P0078879 Slc41a3 protein_coding protein_coding MGP_129S1SvImJ_T0002156.1 MGP_129S1SvImJ_G0002068.1 mouse_genomes_project 6 123482947 123483419 - TEC TEC MGP_129S1SvImJ_T0015411.1 MGP_129S1SvImJ_G0013500.1 mouse_genomes_project 6 65330745 65332348 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102634.1 MGP_129S1SvImJ_G0040467.1 mouse_genomes_project 6 91264419 91265404 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0076904.1 MGP_129S1SvImJ_G0030564.1 mouse_genomes_project 6 32981785 32988035 - MGP_129S1SvImJ_P0076904 3110062M04Rik protein_coding protein_coding MGP_129S1SvImJ_T0076905.1 MGP_129S1SvImJ_G0030564.1 mouse_genomes_project 6 32981854 32988074 - MGP_129S1SvImJ_P0076905 3110062M04Rik protein_coding protein_coding MGP_129S1SvImJ_T0076907.1 MGP_129S1SvImJ_G0030564.1 mouse_genomes_project 6 32983709 32988023 - MGP_129S1SvImJ_P0076907 3110062M04Rik protein_coding protein_coding MGP_129S1SvImJ_T0076908.1 MGP_129S1SvImJ_G0030564.1 mouse_genomes_project 6 32984660 32987143 - MGP_129S1SvImJ_P0076908 3110062M04Rik protein_coding protein_coding MGP_129S1SvImJ_T0076909.1 MGP_129S1SvImJ_G0030564.1 mouse_genomes_project 6 32985360 32986994 - 3110062M04Rik protein_coding retained_intron MGP_129S1SvImJ_T0078019.1 MGP_129S1SvImJ_G0030866.1 mouse_genomes_project 6 72417551 72465170 + MGP_129S1SvImJ_P0078019 Polr1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078020.1 MGP_129S1SvImJ_G0030866.1 mouse_genomes_project 6 72417559 72488089 + MGP_129S1SvImJ_P0078020 Polr1a protein_coding protein_coding MGP_129S1SvImJ_T0078021.1 MGP_129S1SvImJ_G0030866.1 mouse_genomes_project 6 72417567 72431230 + Polr1a protein_coding retained_intron MGP_129S1SvImJ_T0078022.1 MGP_129S1SvImJ_G0030866.1 mouse_genomes_project 6 72420890 72465055 + Polr1a protein_coding retained_intron MGP_129S1SvImJ_T0078023.1 MGP_129S1SvImJ_G0030866.1 mouse_genomes_project 6 72435869 72436487 + Polr1a protein_coding retained_intron MGP_129S1SvImJ_T0078024.1 MGP_129S1SvImJ_G0030866.1 mouse_genomes_project 6 72440956 72441548 + Polr1a protein_coding retained_intron MGP_129S1SvImJ_T0078025.1 MGP_129S1SvImJ_G0030866.1 mouse_genomes_project 6 72445767 72451242 + Polr1a protein_coding processed_transcript MGP_129S1SvImJ_T0078026.1 MGP_129S1SvImJ_G0030866.1 mouse_genomes_project 6 72458379 72464856 + MGP_129S1SvImJ_P0078026 Polr1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078027.1 MGP_129S1SvImJ_G0030866.1 mouse_genomes_project 6 72458380 72459774 + Polr1a protein_coding retained_intron MGP_129S1SvImJ_T0078028.1 MGP_129S1SvImJ_G0030866.1 mouse_genomes_project 6 72467345 72491837 + MGP_129S1SvImJ_P0078028 Polr1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0004935.1 MGP_129S1SvImJ_G0004239.1 mouse_genomes_project 6 25921219 25973635 + 6530409C15Rik antisense antisense MGP_129S1SvImJ_T0004936.1 MGP_129S1SvImJ_G0004239.1 mouse_genomes_project 6 25921240 25924567 + 6530409C15Rik antisense antisense MGP_129S1SvImJ_T0008740.1 MGP_129S1SvImJ_G0007066.1 mouse_genomes_project 6 130742393 130745400 - Gm43635 lincRNA lincRNA MGP_129S1SvImJ_T0080073.1 MGP_129S1SvImJ_G0031270.1 mouse_genomes_project 6 128121805 128136271 - MGP_129S1SvImJ_P0080073 Usp5 protein_coding protein_coding MGP_129S1SvImJ_T0080074.1 MGP_129S1SvImJ_G0031270.1 mouse_genomes_project 6 128121824 128136222 - MGP_129S1SvImJ_P0080074 Usp5 protein_coding protein_coding MGP_129S1SvImJ_T0080075.1 MGP_129S1SvImJ_G0031270.1 mouse_genomes_project 6 128122206 128125424 - Usp5 protein_coding retained_intron MGP_129S1SvImJ_T0080076.1 MGP_129S1SvImJ_G0031270.1 mouse_genomes_project 6 128124032 128124680 - Usp5 protein_coding retained_intron MGP_129S1SvImJ_T0080077.1 MGP_129S1SvImJ_G0031270.1 mouse_genomes_project 6 128128561 128130256 - Usp5 protein_coding retained_intron MGP_129S1SvImJ_T0080078.1 MGP_129S1SvImJ_G0031270.1 mouse_genomes_project 6 128129405 128136195 - MGP_129S1SvImJ_P0080078 Usp5 protein_coding protein_coding MGP_129S1SvImJ_T0080079.1 MGP_129S1SvImJ_G0031270.1 mouse_genomes_project 6 128129513 128130410 - Usp5 protein_coding retained_intron MGP_129S1SvImJ_T0080080.1 MGP_129S1SvImJ_G0031270.1 mouse_genomes_project 6 128129629 128130987 - Usp5 protein_coding retained_intron MGP_129S1SvImJ_T0080081.1 MGP_129S1SvImJ_G0031270.1 mouse_genomes_project 6 128130922 128135682 - MGP_129S1SvImJ_P0080081 Usp5 protein_coding protein_coding MGP_129S1SvImJ_T0008702.1 MGP_129S1SvImJ_G0007034.1 mouse_genomes_project 6 103621741 103640153 + Gm44169 lincRNA lincRNA MGP_129S1SvImJ_T0015272.1 MGP_129S1SvImJ_G0013361.1 mouse_genomes_project 6 9146380 9146678 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078136.1 MGP_129S1SvImJ_G0030888.1 mouse_genomes_project 6 74081946 74083041 - MGP_129S1SvImJ_P0078136 4931417E11Rik protein_coding protein_coding MGP_129S1SvImJ_T0078137.1 MGP_129S1SvImJ_G0030888.1 mouse_genomes_project 6 74081954 74082993 - 4931417E11Rik protein_coding processed_transcript MGP_129S1SvImJ_T0078138.1 MGP_129S1SvImJ_G0030888.1 mouse_genomes_project 6 74082020 74082938 - 4931417E11Rik protein_coding transcribed_processed_pseudogene MGP_129S1SvImJ_T0079145.1 MGP_129S1SvImJ_G0031093.1 mouse_genomes_project 6 107861106 108027462 + Cntn4 protein_coding processed_transcript MGP_129S1SvImJ_T0079146.1 MGP_129S1SvImJ_G0031093.1 mouse_genomes_project 6 107861191 108909112 + MGP_129S1SvImJ_P0079146 Cntn4 protein_coding protein_coding MGP_129S1SvImJ_T0079147.1 MGP_129S1SvImJ_G0031093.1 mouse_genomes_project 6 107861191 108935741 + MGP_129S1SvImJ_P0079147 Cntn4 protein_coding protein_coding MGP_129S1SvImJ_T0079148.1 MGP_129S1SvImJ_G0031093.1 mouse_genomes_project 6 107861221 108935746 + MGP_129S1SvImJ_P0079148 Cntn4 protein_coding protein_coding MGP_129S1SvImJ_T0079149.1 MGP_129S1SvImJ_G0031093.1 mouse_genomes_project 6 108121238 108909118 + MGP_129S1SvImJ_P0079149 Cntn4 protein_coding protein_coding MGP_129S1SvImJ_T0079150.1 MGP_129S1SvImJ_G0031093.1 mouse_genomes_project 6 108320859 108844461 + MGP_129S1SvImJ_P0079150 Cntn4 protein_coding protein_coding MGP_129S1SvImJ_T0079151.1 MGP_129S1SvImJ_G0031093.1 mouse_genomes_project 6 108321012 108748762 + Cntn4 protein_coding processed_transcript MGP_129S1SvImJ_T0079152.1 MGP_129S1SvImJ_G0031093.1 mouse_genomes_project 6 108321100 108908335 + MGP_129S1SvImJ_P0079152 Cntn4 protein_coding protein_coding MGP_129S1SvImJ_T0079153.1 MGP_129S1SvImJ_G0031093.1 mouse_genomes_project 6 108321149 108562473 + Cntn4 protein_coding processed_transcript MGP_129S1SvImJ_T0079154.1 MGP_129S1SvImJ_G0031093.1 mouse_genomes_project 6 108735947 108934194 + Cntn4 protein_coding processed_transcript MGP_129S1SvImJ_T0079155.1 MGP_129S1SvImJ_G0031093.1 mouse_genomes_project 6 108888192 108935628 + Cntn4 protein_coding processed_transcript MGP_129S1SvImJ_T0079156.1 MGP_129S1SvImJ_G0031093.1 mouse_genomes_project 6 108913956 108914931 + Cntn4 protein_coding retained_intron MGP_129S1SvImJ_T0079157.1 MGP_129S1SvImJ_G0031093.1 mouse_genomes_project 6 108928905 108934338 + Cntn4 protein_coding processed_transcript MGP_129S1SvImJ_T0077122.1 MGP_129S1SvImJ_G0030611.1 mouse_genomes_project 6 38975329 38980014 - MGP_129S1SvImJ_P0077122 Prss37 protein_coding protein_coding MGP_129S1SvImJ_T0077123.1 MGP_129S1SvImJ_G0030611.1 mouse_genomes_project 6 38979674 38979989 - Prss37 protein_coding processed_transcript MGP_129S1SvImJ_T0010792.1 MGP_129S1SvImJ_G0008908.1 mouse_genomes_project 6 70508986 70509096 - Gm24096 miRNA miRNA MGP_129S1SvImJ_T0077827.1 MGP_129S1SvImJ_G0030823.1 mouse_genomes_project 6 60468603 60569117 - MGP_129S1SvImJ_P0077827 Snca protein_coding protein_coding MGP_129S1SvImJ_T0077828.1 MGP_129S1SvImJ_G0030823.1 mouse_genomes_project 6 60468607 60568266 - MGP_129S1SvImJ_P0077828 Snca protein_coding protein_coding MGP_129S1SvImJ_T0077830.1 MGP_129S1SvImJ_G0030823.1 mouse_genomes_project 6 60544400 60566818 - Snca protein_coding processed_transcript MGP_129S1SvImJ_T0077831.1 MGP_129S1SvImJ_G0030823.1 mouse_genomes_project 6 60550412 60568134 - Snca protein_coding retained_intron MGP_129S1SvImJ_T0080299.1 MGP_129S1SvImJ_G0031313.1 mouse_genomes_project 6 130606763 130632694 - MGP_129S1SvImJ_P0080299 Ccnd2 protein_coding protein_coding MGP_129S1SvImJ_T0080300.1 MGP_129S1SvImJ_G0031313.1 mouse_genomes_project 6 130612132 130620777 - Ccnd2 protein_coding processed_transcript MGP_129S1SvImJ_T0080301.1 MGP_129S1SvImJ_G0031313.1 mouse_genomes_project 6 130620717 130628322 - Ccnd2 protein_coding processed_transcript MGP_129S1SvImJ_T0080302.1 MGP_129S1SvImJ_G0031313.1 mouse_genomes_project 6 130627656 130633827 - MGP_129S1SvImJ_P0080302 Ccnd2 protein_coding protein_coding MGP_129S1SvImJ_T0080303.1 MGP_129S1SvImJ_G0031313.1 mouse_genomes_project 6 130629135 130632641 - Ccnd2 protein_coding retained_intron MGP_129S1SvImJ_T0080304.1 MGP_129S1SvImJ_G0031313.1 mouse_genomes_project 6 130629916 130632667 - MGP_129S1SvImJ_P0080304 Ccnd2 protein_coding protein_coding MGP_129S1SvImJ_T0080305.1 MGP_129S1SvImJ_G0031313.1 mouse_genomes_project 6 130629933 130632641 - MGP_129S1SvImJ_P0080305 Ccnd2 protein_coding protein_coding MGP_129S1SvImJ_T0080306.1 MGP_129S1SvImJ_G0031313.1 mouse_genomes_project 6 130632414 130632595 - Ccnd2 protein_coding processed_transcript MGP_129S1SvImJ_T0015560.1 MGP_129S1SvImJ_G0013649.1 mouse_genomes_project 6 115464178 115464305 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076269.1 MGP_129S1SvImJ_G0030452.1 mouse_genomes_project 6 5549235 5700573 - MGP_129S1SvImJ_P0076269 Ica1 protein_coding protein_coding MGP_129S1SvImJ_T0076270.1 MGP_129S1SvImJ_G0030452.1 mouse_genomes_project 6 5549235 5700618 - MGP_129S1SvImJ_P0076270 Ica1 protein_coding protein_coding MGP_129S1SvImJ_T0076271.1 MGP_129S1SvImJ_G0030452.1 mouse_genomes_project 6 5549235 5700288 - MGP_129S1SvImJ_P0076271 Ica1 protein_coding protein_coding MGP_129S1SvImJ_T0076272.1 MGP_129S1SvImJ_G0030452.1 mouse_genomes_project 6 5549235 5677251 - MGP_129S1SvImJ_P0076272 Ica1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076273.1 MGP_129S1SvImJ_G0030452.1 mouse_genomes_project 6 5549407 5566831 - Ica1 protein_coding processed_transcript MGP_129S1SvImJ_T0076274.1 MGP_129S1SvImJ_G0030452.1 mouse_genomes_project 6 5578229 5700288 - MGP_129S1SvImJ_P0076274 Ica1 protein_coding protein_coding MGP_129S1SvImJ_T0076275.1 MGP_129S1SvImJ_G0030452.1 mouse_genomes_project 6 5578936 5593981 - MGP_129S1SvImJ_P0076275 Ica1 protein_coding protein_coding MGP_129S1SvImJ_T0076276.1 MGP_129S1SvImJ_G0030452.1 mouse_genomes_project 6 5578946 5700621 - MGP_129S1SvImJ_P0076276 Ica1 protein_coding protein_coding MGP_129S1SvImJ_T0076277.1 MGP_129S1SvImJ_G0030452.1 mouse_genomes_project 6 5578947 5656024 - MGP_129S1SvImJ_P0076277 Ica1 protein_coding protein_coding MGP_129S1SvImJ_T0076278.1 MGP_129S1SvImJ_G0030452.1 mouse_genomes_project 6 5649367 5700622 - Ica1 protein_coding processed_transcript MGP_129S1SvImJ_T0076279.1 MGP_129S1SvImJ_G0030452.1 mouse_genomes_project 6 5668569 5691482 - MGP_129S1SvImJ_P0076279 Ica1 protein_coding protein_coding MGP_129S1SvImJ_T0076280.1 MGP_129S1SvImJ_G0030452.1 mouse_genomes_project 6 5673484 5700257 - MGP_129S1SvImJ_P0076280 Ica1 protein_coding protein_coding MGP_129S1SvImJ_T0080820.1 MGP_129S1SvImJ_G0031456.1 mouse_genomes_project 6 146694135 146736224 - MGP_129S1SvImJ_P0080820 Slco1a1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0080821.1 MGP_129S1SvImJ_G0031456.1 mouse_genomes_project 6 146694141 146736396 - MGP_129S1SvImJ_P0080821 Slco1a1 protein_coding protein_coding MGP_129S1SvImJ_T0080822.1 MGP_129S1SvImJ_G0031456.1 mouse_genomes_project 6 146694712 146736548 - MGP_129S1SvImJ_P0080822 Slco1a1 protein_coding protein_coding MGP_129S1SvImJ_T0080823.1 MGP_129S1SvImJ_G0031456.1 mouse_genomes_project 6 146710758 146736402 - Slco1a1 protein_coding retained_intron MGP_129S1SvImJ_T0008744.1 MGP_129S1SvImJ_G0007070.1 mouse_genomes_project 6 131743867 131759287 - 9330102E08Rik lincRNA lincRNA MGP_129S1SvImJ_T0010839.1 MGP_129S1SvImJ_G0008955.1 mouse_genomes_project 6 142494721 142494835 - Gm24308 miRNA miRNA MGP_129S1SvImJ_T0000314.1 MGP_129S1SvImJ_G0000256.1 mouse_genomes_project 6 68673324 68673611 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0077748.1 MGP_129S1SvImJ_G0030787.1 mouse_genomes_project 6 56486178 56487172 - MGP_129S1SvImJ_P0077748 Vmn1r10 protein_coding protein_coding MGP_129S1SvImJ_T0079869.1 MGP_129S1SvImJ_G0031219.1 mouse_genomes_project 6 124595354 124598366 + MGP_129S1SvImJ_P0079869 A2m protein_coding protein_coding MGP_129S1SvImJ_T0079870.1 MGP_129S1SvImJ_G0031219.1 mouse_genomes_project 6 124596206 124636498 + MGP_129S1SvImJ_P0079870 A2m protein_coding protein_coding MGP_129S1SvImJ_T0079871.1 MGP_129S1SvImJ_G0031219.1 mouse_genomes_project 6 124616106 124618685 + A2m protein_coding retained_intron MGP_129S1SvImJ_T0079295.1 MGP_129S1SvImJ_G0031118.1 mouse_genomes_project 6 115846945 115857810 - MGP_129S1SvImJ_P0079295 Camk1 protein_coding protein_coding MGP_129S1SvImJ_T0079296.1 MGP_129S1SvImJ_G0031118.1 mouse_genomes_project 6 115846949 115849443 - Camk1 protein_coding retained_intron MGP_129S1SvImJ_T0079297.1 MGP_129S1SvImJ_G0031118.1 mouse_genomes_project 6 115846958 115857730 - Camk1 protein_coding retained_intron MGP_129S1SvImJ_T0079298.1 MGP_129S1SvImJ_G0031118.1 mouse_genomes_project 6 115850782 115854749 - Camk1 protein_coding retained_intron MGP_129S1SvImJ_T0079299.1 MGP_129S1SvImJ_G0031118.1 mouse_genomes_project 6 115851954 115857804 - MGP_129S1SvImJ_P0079299 Camk1 protein_coding protein_coding MGP_129S1SvImJ_T0079300.1 MGP_129S1SvImJ_G0031118.1 mouse_genomes_project 6 115854734 115857789 - Camk1 protein_coding retained_intron MGP_129S1SvImJ_T0076464.1 MGP_129S1SvImJ_G0030483.1 mouse_genomes_project 6 19789697 19795396 + MGP_129S1SvImJ_P0076464 Wnt16 protein_coding protein_coding MGP_129S1SvImJ_T0076465.1 MGP_129S1SvImJ_G0030483.1 mouse_genomes_project 6 19789700 19800326 + MGP_129S1SvImJ_P0076465 Wnt16 protein_coding protein_coding MGP_129S1SvImJ_T0076466.1 MGP_129S1SvImJ_G0030483.1 mouse_genomes_project 6 19789758 19796402 + MGP_129S1SvImJ_P0076466 Wnt16 protein_coding protein_coding MGP_129S1SvImJ_T0076467.1 MGP_129S1SvImJ_G0030483.1 mouse_genomes_project 6 19790331 19799631 + MGP_129S1SvImJ_P0076467 Wnt16 protein_coding protein_coding MGP_129S1SvImJ_T0100016.1 MGP_129S1SvImJ_G0038083.1 mouse_genomes_project 6 105694947 105695009 + Gm24784 snRNA snRNA MGP_129S1SvImJ_T0078965.1 MGP_129S1SvImJ_G0031055.1 mouse_genomes_project 6 93723162 93797778 + MGP_129S1SvImJ_P0078965 Nr2c2 protein_coding protein_coding MGP_129S1SvImJ_T0078966.1 MGP_129S1SvImJ_G0031055.1 mouse_genomes_project 6 93724205 93794437 + MGP_129S1SvImJ_P0078966 Nr2c2 protein_coding protein_coding MGP_129S1SvImJ_T0078967.1 MGP_129S1SvImJ_G0031055.1 mouse_genomes_project 6 93764740 93766548 + MGP_129S1SvImJ_P0078967 Nr2c2 protein_coding protein_coding MGP_129S1SvImJ_T0078968.1 MGP_129S1SvImJ_G0031055.1 mouse_genomes_project 6 93765341 93768944 + Nr2c2 protein_coding retained_intron MGP_129S1SvImJ_T0078969.1 MGP_129S1SvImJ_G0031055.1 mouse_genomes_project 6 93766511 93795400 + MGP_129S1SvImJ_P0078969 Nr2c2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078970.1 MGP_129S1SvImJ_G0031055.1 mouse_genomes_project 6 93771356 93782241 + Nr2c2 protein_coding processed_transcript MGP_129S1SvImJ_T0078971.1 MGP_129S1SvImJ_G0031055.1 mouse_genomes_project 6 93782600 93784447 + Nr2c2 protein_coding retained_intron MGP_129S1SvImJ_T0078972.1 MGP_129S1SvImJ_G0031055.1 mouse_genomes_project 6 93789804 93806817 + Nr2c2 protein_coding processed_transcript MGP_129S1SvImJ_T0080883.1 MGP_129S1SvImJ_G0031472.1 mouse_genomes_project 6 147840083 147933937 - MGP_129S1SvImJ_P0080883 C2cd5 protein_coding protein_coding MGP_129S1SvImJ_T0080884.1 MGP_129S1SvImJ_G0031472.1 mouse_genomes_project 6 147840083 147933937 - MGP_129S1SvImJ_P0080884 C2cd5 protein_coding protein_coding MGP_129S1SvImJ_T0080885.1 MGP_129S1SvImJ_G0031472.1 mouse_genomes_project 6 147840088 147933920 - MGP_129S1SvImJ_P0080885 C2cd5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080886.1 MGP_129S1SvImJ_G0031472.1 mouse_genomes_project 6 147840091 147933557 - MGP_129S1SvImJ_P0080886 C2cd5 protein_coding protein_coding MGP_129S1SvImJ_T0080887.1 MGP_129S1SvImJ_G0031472.1 mouse_genomes_project 6 147840645 147933548 - MGP_129S1SvImJ_P0080887 C2cd5 protein_coding protein_coding MGP_129S1SvImJ_T0080888.1 MGP_129S1SvImJ_G0031472.1 mouse_genomes_project 6 147840896 147933901 - MGP_129S1SvImJ_P0080888 C2cd5 protein_coding protein_coding MGP_129S1SvImJ_T0080889.1 MGP_129S1SvImJ_G0031472.1 mouse_genomes_project 6 147840902 147842876 - C2cd5 protein_coding retained_intron MGP_129S1SvImJ_T0080890.1 MGP_129S1SvImJ_G0031472.1 mouse_genomes_project 6 147841100 147933835 - MGP_129S1SvImJ_P0080890 C2cd5 protein_coding protein_coding MGP_129S1SvImJ_T0080891.1 MGP_129S1SvImJ_G0031472.1 mouse_genomes_project 6 147847433 147851195 - C2cd5 protein_coding retained_intron MGP_129S1SvImJ_T0080892.1 MGP_129S1SvImJ_G0031472.1 mouse_genomes_project 6 147856622 147933937 - C2cd5 protein_coding retained_intron MGP_129S1SvImJ_T0080893.1 MGP_129S1SvImJ_G0031472.1 mouse_genomes_project 6 147872678 147899632 - MGP_129S1SvImJ_P0080893 C2cd5 protein_coding protein_coding MGP_129S1SvImJ_T0080894.1 MGP_129S1SvImJ_G0031472.1 mouse_genomes_project 6 147878117 147883146 - C2cd5 protein_coding retained_intron MGP_129S1SvImJ_T0080895.1 MGP_129S1SvImJ_G0031472.1 mouse_genomes_project 6 147903122 147933630 - C2cd5 protein_coding retained_intron MGP_129S1SvImJ_T0080896.1 MGP_129S1SvImJ_G0031472.1 mouse_genomes_project 6 147905195 147913975 - C2cd5 protein_coding processed_transcript MGP_129S1SvImJ_T0080897.1 MGP_129S1SvImJ_G0031472.1 mouse_genomes_project 6 147910540 147912520 - C2cd5 protein_coding retained_intron MGP_129S1SvImJ_T0080898.1 MGP_129S1SvImJ_G0031472.1 mouse_genomes_project 6 147910907 147933971 - MGP_129S1SvImJ_P0080898 C2cd5 protein_coding protein_coding MGP_129S1SvImJ_T0080899.1 MGP_129S1SvImJ_G0031472.1 mouse_genomes_project 6 147915405 147933908 - C2cd5 protein_coding retained_intron MGP_129S1SvImJ_T0008775.1 MGP_129S1SvImJ_G0007090.1 mouse_genomes_project 6 147943047 147993903 - Gm31108 lincRNA lincRNA MGP_129S1SvImJ_T0011651.1 MGP_129S1SvImJ_G0009767.1 mouse_genomes_project 6 16372191 16372506 + Gm22718 misc_RNA misc_RNA MGP_129S1SvImJ_T0015599.1 MGP_129S1SvImJ_G0013688.1 mouse_genomes_project 6 125658050 125658241 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008603.1 MGP_129S1SvImJ_G0006957.1 mouse_genomes_project 6 50451314 50455807 - Gm44447 lincRNA lincRNA MGP_129S1SvImJ_T0081098.1 MGP_129S1SvImJ_G0031505.1 mouse_genomes_project 6 153944763 153945926 - Caprin2 protein_coding retained_intron MGP_129S1SvImJ_T0081099.1 MGP_129S1SvImJ_G0031505.1 mouse_genomes_project 6 153944763 154002454 - MGP_129S1SvImJ_P0081099 Caprin2 protein_coding protein_coding MGP_129S1SvImJ_T0081100.1 MGP_129S1SvImJ_G0031505.1 mouse_genomes_project 6 153944764 153954601 - MGP_129S1SvImJ_P0081100 Caprin2 protein_coding protein_coding MGP_129S1SvImJ_T0081101.1 MGP_129S1SvImJ_G0031505.1 mouse_genomes_project 6 153944764 154002367 - MGP_129S1SvImJ_P0081101 Caprin2 protein_coding protein_coding MGP_129S1SvImJ_T0081102.1 MGP_129S1SvImJ_G0031505.1 mouse_genomes_project 6 153946308 153952389 - Caprin2 protein_coding retained_intron MGP_129S1SvImJ_T0081103.1 MGP_129S1SvImJ_G0031505.1 mouse_genomes_project 6 153946836 153954572 - Caprin2 protein_coding processed_transcript MGP_129S1SvImJ_T0081104.1 MGP_129S1SvImJ_G0031505.1 mouse_genomes_project 6 153950843 153963735 - Caprin2 protein_coding processed_transcript MGP_129S1SvImJ_T0081105.1 MGP_129S1SvImJ_G0031505.1 mouse_genomes_project 6 153981390 154001676 - MGP_129S1SvImJ_P0081105 Caprin2 protein_coding protein_coding MGP_129S1SvImJ_T0081106.1 MGP_129S1SvImJ_G0031505.1 mouse_genomes_project 6 153987978 153994259 - Caprin2 protein_coding retained_intron MGP_129S1SvImJ_T0081107.1 MGP_129S1SvImJ_G0031505.1 mouse_genomes_project 6 153991111 154002379 - Caprin2 protein_coding processed_transcript MGP_129S1SvImJ_T0081108.1 MGP_129S1SvImJ_G0031505.1 mouse_genomes_project 6 154000386 154001826 - Caprin2 protein_coding processed_transcript MGP_129S1SvImJ_T0002003.1 MGP_129S1SvImJ_G0001916.1 mouse_genomes_project 6 46541466 46543049 + TEC TEC MGP_129S1SvImJ_T0101249.1 MGP_129S1SvImJ_G0039316.1 mouse_genomes_project 6 57384005 57384134 - Gm25726 snoRNA snoRNA MGP_129S1SvImJ_T0004974.1 MGP_129S1SvImJ_G0004270.1 mouse_genomes_project 6 51408332 51409486 + Gm15050 antisense antisense MGP_129S1SvImJ_T0076551.1 MGP_129S1SvImJ_G0030507.1 mouse_genomes_project 6 26143466 26149102 - MGP_129S1SvImJ_P0076551 Gcc1 protein_coding protein_coding MGP_129S1SvImJ_T0076552.1 MGP_129S1SvImJ_G0030507.1 mouse_genomes_project 6 26145204 26155659 - MGP_129S1SvImJ_P0076552 Gcc1 protein_coding protein_coding MGP_129S1SvImJ_T0076553.1 MGP_129S1SvImJ_G0030507.1 mouse_genomes_project 6 26147037 26148236 - MGP_129S1SvImJ_P0076553 Gcc1 protein_coding protein_coding MGP_129S1SvImJ_T0076554.1 MGP_129S1SvImJ_G0030507.1 mouse_genomes_project 6 26148657 26151462 - MGP_129S1SvImJ_P0076554 Gcc1 protein_coding protein_coding MGP_129S1SvImJ_T0078989.1 MGP_129S1SvImJ_G0031061.1 mouse_genomes_project 6 94486744 94516474 + MGP_129S1SvImJ_P0078989 A730049H05Rik protein_coding protein_coding MGP_129S1SvImJ_T0078990.1 MGP_129S1SvImJ_G0031061.1 mouse_genomes_project 6 94500048 94520144 + A730049H05Rik protein_coding processed_transcript MGP_129S1SvImJ_T0077028.1 MGP_129S1SvImJ_G0030590.1 mouse_genomes_project 6 36995658 37016131 + MGP_129S1SvImJ_P0077028 Clec2l protein_coding protein_coding MGP_129S1SvImJ_T0015612.1 MGP_129S1SvImJ_G0013701.1 mouse_genomes_project 6 129122917 129123308 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081066.1 MGP_129S1SvImJ_G0031502.1 mouse_genomes_project 6 153242659 153278820 - MGP_129S1SvImJ_P0081066 Ergic2 protein_coding protein_coding MGP_129S1SvImJ_T0081067.1 MGP_129S1SvImJ_G0031502.1 mouse_genomes_project 6 153244827 153278553 - MGP_129S1SvImJ_P0081067 Ergic2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081068.1 MGP_129S1SvImJ_G0031502.1 mouse_genomes_project 6 153244921 153252918 - MGP_129S1SvImJ_P0081068 Ergic2 protein_coding protein_coding MGP_129S1SvImJ_T0081069.1 MGP_129S1SvImJ_G0031502.1 mouse_genomes_project 6 153244976 153246820 - MGP_129S1SvImJ_P0081069 Ergic2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081070.1 MGP_129S1SvImJ_G0031502.1 mouse_genomes_project 6 153245256 153261760 - MGP_129S1SvImJ_P0081070 Ergic2 protein_coding protein_coding MGP_129S1SvImJ_T0081071.1 MGP_129S1SvImJ_G0031502.1 mouse_genomes_project 6 153245539 153262745 - Ergic2 protein_coding retained_intron MGP_129S1SvImJ_T0081072.1 MGP_129S1SvImJ_G0031502.1 mouse_genomes_project 6 153246657 153254532 - Ergic2 protein_coding retained_intron MGP_129S1SvImJ_T0081073.1 MGP_129S1SvImJ_G0031502.1 mouse_genomes_project 6 153247309 153278820 - Ergic2 protein_coding processed_transcript MGP_129S1SvImJ_T0081074.1 MGP_129S1SvImJ_G0031502.1 mouse_genomes_project 6 153252862 153263030 - Ergic2 protein_coding retained_intron MGP_129S1SvImJ_T0081075.1 MGP_129S1SvImJ_G0031502.1 mouse_genomes_project 6 153254325 153261743 - Ergic2 protein_coding processed_transcript MGP_129S1SvImJ_T0081076.1 MGP_129S1SvImJ_G0031502.1 mouse_genomes_project 6 153254371 153278468 - MGP_129S1SvImJ_P0081076 Ergic2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081077.1 MGP_129S1SvImJ_G0031502.1 mouse_genomes_project 6 153255744 153262847 - Ergic2 protein_coding processed_transcript MGP_129S1SvImJ_T0081078.1 MGP_129S1SvImJ_G0031502.1 mouse_genomes_project 6 153261697 153269233 - Ergic2 protein_coding retained_intron MGP_129S1SvImJ_T0081079.1 MGP_129S1SvImJ_G0031502.1 mouse_genomes_project 6 153265400 153278423 - Ergic2 protein_coding retained_intron MGP_129S1SvImJ_T0081080.1 MGP_129S1SvImJ_G0031502.1 mouse_genomes_project 6 153267935 153278468 - MGP_129S1SvImJ_P0081080 Ergic2 protein_coding protein_coding MGP_129S1SvImJ_T0081081.1 MGP_129S1SvImJ_G0031502.1 mouse_genomes_project 6 153268690 153278467 - Ergic2 protein_coding retained_intron MGP_129S1SvImJ_T0081082.1 MGP_129S1SvImJ_G0031502.1 mouse_genomes_project 6 153269143 153278451 - Ergic2 protein_coding processed_transcript MGP_129S1SvImJ_T0080397.1 MGP_129S1SvImJ_G0031335.1 mouse_genomes_project 6 132467049 132480796 - MGP_129S1SvImJ_P0080397 protein_coding protein_coding MGP_129S1SvImJ_T0080398.1 MGP_129S1SvImJ_G0031335.1 mouse_genomes_project 6 132467718 132480778 - MGP_129S1SvImJ_P0080398 protein_coding protein_coding MGP_129S1SvImJ_T0080399.1 MGP_129S1SvImJ_G0031335.1 mouse_genomes_project 6 132468237 132480755 - MGP_129S1SvImJ_P0080399 protein_coding protein_coding MGP_129S1SvImJ_T0080400.1 MGP_129S1SvImJ_G0031335.1 mouse_genomes_project 6 132473229 132480770 - MGP_129S1SvImJ_P0080400 protein_coding protein_coding MGP_129S1SvImJ_T0002585.1 MGP_129S1SvImJ_G0002488.1 mouse_genomes_project 6 40041783 40041837 + Trbj1-3 TR_J_gene processed_transcript MGP_129S1SvImJ_T0002586.1 MGP_129S1SvImJ_G0002488.1 mouse_genomes_project 6 40041783 40041833 + MGP_129S1SvImJ_P0002586 Trbj1-3 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0008516.1 MGP_129S1SvImJ_G0006900.1 mouse_genomes_project 6 7866246 7943829 + Gm44004 lincRNA lincRNA MGP_129S1SvImJ_T0101239.1 MGP_129S1SvImJ_G0039306.1 mouse_genomes_project 6 40783236 40783314 + Gm25108 snoRNA snoRNA MGP_129S1SvImJ_T0076426.1 MGP_129S1SvImJ_G0030476.1 mouse_genomes_project 6 15664554 15730996 - Cttnbp2 protein_coding retained_intron MGP_129S1SvImJ_T0076427.1 MGP_129S1SvImJ_G0030476.1 mouse_genomes_project 6 15664641 15739185 - MGP_129S1SvImJ_P0076427 Cttnbp2 protein_coding protein_coding MGP_129S1SvImJ_T0076428.1 MGP_129S1SvImJ_G0030476.1 mouse_genomes_project 6 15664783 15830225 - MGP_129S1SvImJ_P0076428 Cttnbp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076429.1 MGP_129S1SvImJ_G0030476.1 mouse_genomes_project 6 15665296 15830297 - MGP_129S1SvImJ_P0076429 Cttnbp2 protein_coding protein_coding MGP_129S1SvImJ_T0076430.1 MGP_129S1SvImJ_G0030476.1 mouse_genomes_project 6 15693561 15711301 - MGP_129S1SvImJ_P0076430 Cttnbp2 protein_coding protein_coding MGP_129S1SvImJ_T0076431.1 MGP_129S1SvImJ_G0030476.1 mouse_genomes_project 6 15736673 15830275 - Cttnbp2 protein_coding retained_intron MGP_129S1SvImJ_T0076432.1 MGP_129S1SvImJ_G0030476.1 mouse_genomes_project 6 15739984 15828580 - MGP_129S1SvImJ_P0076432 Cttnbp2 protein_coding protein_coding MGP_129S1SvImJ_T0076433.1 MGP_129S1SvImJ_G0030476.1 mouse_genomes_project 6 15754092 15813174 - MGP_129S1SvImJ_P0076433 Cttnbp2 protein_coding protein_coding MGP_129S1SvImJ_T0076434.1 MGP_129S1SvImJ_G0030476.1 mouse_genomes_project 6 15812743 15830319 - Cttnbp2 protein_coding retained_intron MGP_129S1SvImJ_T0077751.1 MGP_129S1SvImJ_G0030790.1 mouse_genomes_project 6 56626543 56627570 + MGP_129S1SvImJ_P0077751 Vmn1r11 protein_coding protein_coding MGP_129S1SvImJ_T0015512.1 MGP_129S1SvImJ_G0013601.1 mouse_genomes_project 6 94821993 94822980 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080536.1 MGP_129S1SvImJ_G0031398.1 mouse_genomes_project 6 137217785 137218785 - MGP_129S1SvImJ_P0080536 Tas2r140 protein_coding protein_coding MGP_129S1SvImJ_T0079301.1 MGP_129S1SvImJ_G0031119.1 mouse_genomes_project 6 115882980 115893799 - MGP_129S1SvImJ_P0079301 Tada3 protein_coding protein_coding MGP_129S1SvImJ_T0079302.1 MGP_129S1SvImJ_G0031119.1 mouse_genomes_project 6 115882993 115894093 - MGP_129S1SvImJ_P0079302 Tada3 protein_coding protein_coding MGP_129S1SvImJ_T0079303.1 MGP_129S1SvImJ_G0031119.1 mouse_genomes_project 6 115883241 115887456 - Tada3 protein_coding retained_intron MGP_129S1SvImJ_T0079304.1 MGP_129S1SvImJ_G0031119.1 mouse_genomes_project 6 115890667 115894021 - Tada3 protein_coding retained_intron MGP_129S1SvImJ_T0079305.1 MGP_129S1SvImJ_G0031119.1 mouse_genomes_project 6 115890764 115894021 - Tada3 protein_coding retained_intron MGP_129S1SvImJ_T0079306.1 MGP_129S1SvImJ_G0031119.1 mouse_genomes_project 6 115892285 115894038 - MGP_129S1SvImJ_P0079306 Tada3 protein_coding protein_coding MGP_129S1SvImJ_T0015249.1 MGP_129S1SvImJ_G0013338.1 mouse_genomes_project 6 1001567 1001814 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081000.1 MGP_129S1SvImJ_G0031487.1 mouse_genomes_project 6 151605709 151622338 + MGP_129S1SvImJ_P0081000 Fgfr1op2 protein_coding protein_coding MGP_129S1SvImJ_T0081001.1 MGP_129S1SvImJ_G0031487.1 mouse_genomes_project 6 151606378 151628615 + MGP_129S1SvImJ_P0081001 Fgfr1op2 protein_coding protein_coding MGP_129S1SvImJ_T0081002.1 MGP_129S1SvImJ_G0031487.1 mouse_genomes_project 6 151606378 151628615 + MGP_129S1SvImJ_P0081002 Fgfr1op2 protein_coding protein_coding MGP_129S1SvImJ_T0081003.1 MGP_129S1SvImJ_G0031487.1 mouse_genomes_project 6 151606440 151622338 + MGP_129S1SvImJ_P0081003 Fgfr1op2 protein_coding protein_coding MGP_129S1SvImJ_T0081004.1 MGP_129S1SvImJ_G0031487.1 mouse_genomes_project 6 151606459 151618552 + Fgfr1op2 protein_coding processed_transcript MGP_129S1SvImJ_T0081005.1 MGP_129S1SvImJ_G0031487.1 mouse_genomes_project 6 151606461 151615847 + Fgfr1op2 protein_coding retained_intron MGP_129S1SvImJ_T0081006.1 MGP_129S1SvImJ_G0031487.1 mouse_genomes_project 6 151616856 151626747 + Fgfr1op2 protein_coding processed_transcript MGP_129S1SvImJ_T0078853.1 MGP_129S1SvImJ_G0031036.1 mouse_genomes_project 6 91897004 91912590 + MGP_129S1SvImJ_P0078853 Zxdc protein_coding protein_coding MGP_129S1SvImJ_T0078854.1 MGP_129S1SvImJ_G0031036.1 mouse_genomes_project 6 91897006 91930971 + MGP_129S1SvImJ_P0078854 Zxdc protein_coding protein_coding MGP_129S1SvImJ_T0078855.1 MGP_129S1SvImJ_G0031036.1 mouse_genomes_project 6 91897120 91911721 + MGP_129S1SvImJ_P0078855 Zxdc protein_coding protein_coding MGP_129S1SvImJ_T0078856.1 MGP_129S1SvImJ_G0031036.1 mouse_genomes_project 6 91897125 91910609 + MGP_129S1SvImJ_P0078856 Zxdc protein_coding protein_coding MGP_129S1SvImJ_T0078857.1 MGP_129S1SvImJ_G0031036.1 mouse_genomes_project 6 91897130 91902064 + Zxdc protein_coding retained_intron MGP_129S1SvImJ_T0010813.1 MGP_129S1SvImJ_G0008929.1 mouse_genomes_project 6 110748549 110748610 + Mir7661 miRNA miRNA MGP_129S1SvImJ_T0099997.1 MGP_129S1SvImJ_G0038064.1 mouse_genomes_project 6 41375141 41375247 + Gm23982 snRNA snRNA MGP_129S1SvImJ_T0015565.1 MGP_129S1SvImJ_G0013654.1 mouse_genomes_project 6 116614297 116614373 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008700.1 MGP_129S1SvImJ_G0007032.1 mouse_genomes_project 6 102569903 102575831 + 1700049E22Rik lincRNA lincRNA MGP_129S1SvImJ_T0008584.1 MGP_129S1SvImJ_G0006942.1 mouse_genomes_project 6 36880029 36882502 - Gm26699 lincRNA lincRNA MGP_129S1SvImJ_T0000213.1 MGP_129S1SvImJ_G0000164.1 mouse_genomes_project 6 70399836 70400404 - MGP_129S1SvImJ_P0000213 Igkv7-33 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000214.1 MGP_129S1SvImJ_G0000164.1 mouse_genomes_project 6 70399836 70400404 - MGP_129S1SvImJ_P0000214 Igkv7-33 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0102651.1 MGP_129S1SvImJ_G0040484.1 mouse_genomes_project 6 136534421 136541492 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0080699.1 MGP_129S1SvImJ_G0031436.1 mouse_genomes_project 6 142019195 142204118 - MGP_129S1SvImJ_P0080699 Eps8 protein_coding protein_coding MGP_129S1SvImJ_T0080700.1 MGP_129S1SvImJ_G0031436.1 mouse_genomes_project 6 142019618 142122794 - MGP_129S1SvImJ_P0080700 Eps8 protein_coding protein_coding MGP_129S1SvImJ_T0080701.1 MGP_129S1SvImJ_G0031436.1 mouse_genomes_project 6 142020128 142204118 - MGP_129S1SvImJ_P0080701 Eps8 protein_coding protein_coding MGP_129S1SvImJ_T0080702.1 MGP_129S1SvImJ_G0031436.1 mouse_genomes_project 6 142045896 142203133 - MGP_129S1SvImJ_P0080702 Eps8 protein_coding protein_coding MGP_129S1SvImJ_T0080703.1 MGP_129S1SvImJ_G0031436.1 mouse_genomes_project 6 142060610 142067154 - Eps8 protein_coding processed_transcript MGP_129S1SvImJ_T0080704.1 MGP_129S1SvImJ_G0031436.1 mouse_genomes_project 6 142064525 142209675 - MGP_129S1SvImJ_P0080704 Eps8 protein_coding protein_coding MGP_129S1SvImJ_T0080705.1 MGP_129S1SvImJ_G0031436.1 mouse_genomes_project 6 142064549 142067097 - Eps8 protein_coding retained_intron MGP_129S1SvImJ_T0080706.1 MGP_129S1SvImJ_G0031436.1 mouse_genomes_project 6 142070438 142142764 - MGP_129S1SvImJ_P0080706 Eps8 protein_coding protein_coding MGP_129S1SvImJ_T0080707.1 MGP_129S1SvImJ_G0031436.1 mouse_genomes_project 6 142076366 142204062 - Eps8 protein_coding processed_transcript MGP_129S1SvImJ_T0080708.1 MGP_129S1SvImJ_G0031436.1 mouse_genomes_project 6 142084157 142087357 - Eps8 protein_coding retained_intron MGP_129S1SvImJ_T0080709.1 MGP_129S1SvImJ_G0031436.1 mouse_genomes_project 6 142086906 142203133 - MGP_129S1SvImJ_P0080709 Eps8 protein_coding protein_coding MGP_129S1SvImJ_T0080710.1 MGP_129S1SvImJ_G0031436.1 mouse_genomes_project 6 142088604 142204075 - MGP_129S1SvImJ_P0080710 Eps8 protein_coding protein_coding MGP_129S1SvImJ_T0080711.1 MGP_129S1SvImJ_G0031436.1 mouse_genomes_project 6 142118906 142122536 - Eps8 protein_coding retained_intron MGP_129S1SvImJ_T0010773.1 MGP_129S1SvImJ_G0008889.1 mouse_genomes_project 6 28022626 28022732 - Mir96 miRNA miRNA MGP_129S1SvImJ_T0000173.1 MGP_129S1SvImJ_G0000132.1 mouse_genomes_project 6 68898157 68898625 + MGP_129S1SvImJ_P0000173 Igkv10-94 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0002592.1 MGP_129S1SvImJ_G0002493.1 mouse_genomes_project 6 40051613 40051663 + MGP_129S1SvImJ_P0002592 Trbj2-1 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0002178.1 MGP_129S1SvImJ_G0002090.1 mouse_genomes_project 6 137279244 137281073 + TEC TEC MGP_129S1SvImJ_T0002028.1 MGP_129S1SvImJ_G0001941.1 mouse_genomes_project 6 72291298 72294107 + TEC TEC MGP_129S1SvImJ_T0008646.1 MGP_129S1SvImJ_G0006993.1 mouse_genomes_project 6 76677827 76687825 - lincRNA lincRNA MGP_129S1SvImJ_T0002757.1 MGP_129S1SvImJ_G0002632.1 mouse_genomes_project 6 39701092 39701559 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0002034.1 MGP_129S1SvImJ_G0001947.1 mouse_genomes_project 6 73210600 73214009 - TEC TEC MGP_129S1SvImJ_T0002071.1 MGP_129S1SvImJ_G0001984.1 mouse_genomes_project 6 87790529 87792267 + TEC TEC MGP_129S1SvImJ_T0080837.1 MGP_129S1SvImJ_G0031461.1 mouse_genomes_project 6 147133872 147151476 + MGP_129S1SvImJ_P0080837 Pyroxd1 protein_coding protein_coding MGP_129S1SvImJ_T0080838.1 MGP_129S1SvImJ_G0031461.1 mouse_genomes_project 6 147133885 147136093 + Pyroxd1 protein_coding retained_intron MGP_129S1SvImJ_T0080839.1 MGP_129S1SvImJ_G0031461.1 mouse_genomes_project 6 147133896 147150270 + Pyroxd1 protein_coding retained_intron MGP_129S1SvImJ_T0080840.1 MGP_129S1SvImJ_G0031461.1 mouse_genomes_project 6 147135154 147145739 + Pyroxd1 protein_coding processed_transcript MGP_129S1SvImJ_T0080842.1 MGP_129S1SvImJ_G0031461.1 mouse_genomes_project 6 147141158 147142910 + Pyroxd1 protein_coding retained_intron MGP_129S1SvImJ_T0000162.1 MGP_129S1SvImJ_G0000124.1 mouse_genomes_project 6 68437206 68437687 + MGP_129S1SvImJ_P0000162 Igkv14-111 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0002141.1 MGP_129S1SvImJ_G0002054.1 mouse_genomes_project 6 115809931 115810981 - TEC TEC MGP_129S1SvImJ_T0000330.1 MGP_129S1SvImJ_G0000272.1 mouse_genomes_project 6 69622502 69622975 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0076226.1 MGP_129S1SvImJ_G0030440.1 mouse_genomes_project 6 3783969 3787965 + MGP_129S1SvImJ_P0076226 Dlx6 protein_coding protein_coding MGP_129S1SvImJ_T0076227.1 MGP_129S1SvImJ_G0030440.1 mouse_genomes_project 6 3783969 3788798 + MGP_129S1SvImJ_P0076227 Dlx6 protein_coding protein_coding MGP_129S1SvImJ_T0076228.1 MGP_129S1SvImJ_G0030440.1 mouse_genomes_project 6 3784432 3787965 + MGP_129S1SvImJ_P0076228 Dlx6 protein_coding protein_coding MGP_129S1SvImJ_T0076229.1 MGP_129S1SvImJ_G0030440.1 mouse_genomes_project 6 3784433 3786066 + Dlx6 protein_coding retained_intron MGP_129S1SvImJ_T0015331.1 MGP_129S1SvImJ_G0013420.1 mouse_genomes_project 6 39792698 39793261 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077231.1 MGP_129S1SvImJ_G0030655.1 mouse_genomes_project 6 41005723 41010346 - MGP_129S1SvImJ_P0077231 Olfr456 protein_coding protein_coding MGP_129S1SvImJ_T0098616.1 MGP_129S1SvImJ_G0036701.1 mouse_genomes_project 6 21188869 21189002 - Gm24217 rRNA rRNA MGP_129S1SvImJ_T0076558.1 MGP_129S1SvImJ_G0030509.1 mouse_genomes_project 6 26155037 26166512 + MGP_129S1SvImJ_P0076558 Fscn3 protein_coding protein_coding MGP_129S1SvImJ_T0076559.1 MGP_129S1SvImJ_G0030509.1 mouse_genomes_project 6 26162028 26163626 + Fscn3 protein_coding processed_transcript MGP_129S1SvImJ_T0079768.1 MGP_129S1SvImJ_G0031199.1 mouse_genomes_project 6 122964244 123072623 + MGP_129S1SvImJ_P0079768 Ninj2 protein_coding protein_coding MGP_129S1SvImJ_T0079769.1 MGP_129S1SvImJ_G0031199.1 mouse_genomes_project 6 123066099 123072618 + MGP_129S1SvImJ_P0079769 Ninj2 protein_coding protein_coding MGP_129S1SvImJ_T0002213.1 MGP_129S1SvImJ_G0002125.1 mouse_genomes_project 6 154164755 154167479 - TEC TEC MGP_129S1SvImJ_T0080904.1 MGP_129S1SvImJ_G0031474.1 mouse_genomes_project 6 148712725 149111848 - MGP_129S1SvImJ_P0080904 Sox5 protein_coding protein_coding MGP_129S1SvImJ_T0080905.1 MGP_129S1SvImJ_G0031474.1 mouse_genomes_project 6 148712725 149111758 - MGP_129S1SvImJ_P0080905 Sox5 protein_coding protein_coding MGP_129S1SvImJ_T0080906.1 MGP_129S1SvImJ_G0031474.1 mouse_genomes_project 6 148715852 149111830 - MGP_129S1SvImJ_P0080906 Sox5 protein_coding protein_coding MGP_129S1SvImJ_T0080907.1 MGP_129S1SvImJ_G0031474.1 mouse_genomes_project 6 148717072 148832909 - MGP_129S1SvImJ_P0080907 Sox5 protein_coding protein_coding MGP_129S1SvImJ_T0080908.1 MGP_129S1SvImJ_G0031474.1 mouse_genomes_project 6 148717207 149111730 - MGP_129S1SvImJ_P0080908 Sox5 protein_coding protein_coding MGP_129S1SvImJ_T0080909.1 MGP_129S1SvImJ_G0031474.1 mouse_genomes_project 6 148723653 148832904 - Sox5 protein_coding processed_transcript MGP_129S1SvImJ_T0080910.1 MGP_129S1SvImJ_G0031474.1 mouse_genomes_project 6 148727809 149733875 - Sox5 protein_coding retained_intron MGP_129S1SvImJ_T0080911.1 MGP_129S1SvImJ_G0031474.1 mouse_genomes_project 6 148728885 148832900 - MGP_129S1SvImJ_P0080911 Sox5 protein_coding protein_coding MGP_129S1SvImJ_T0080912.1 MGP_129S1SvImJ_G0031474.1 mouse_genomes_project 6 148745002 148832891 - MGP_129S1SvImJ_P0080912 Sox5 protein_coding protein_coding MGP_129S1SvImJ_T0080913.1 MGP_129S1SvImJ_G0031474.1 mouse_genomes_project 6 148790009 149106705 - Sox5 protein_coding retained_intron MGP_129S1SvImJ_T0080914.1 MGP_129S1SvImJ_G0031474.1 mouse_genomes_project 6 148912870 149111758 - Sox5 protein_coding retained_intron MGP_129S1SvImJ_T0080915.1 MGP_129S1SvImJ_G0031474.1 mouse_genomes_project 6 149003568 149733817 - Sox5 protein_coding processed_transcript MGP_129S1SvImJ_T0080916.1 MGP_129S1SvImJ_G0031474.1 mouse_genomes_project 6 149015620 149106335 - Sox5 protein_coding processed_transcript MGP_129S1SvImJ_T0080917.1 MGP_129S1SvImJ_G0031474.1 mouse_genomes_project 6 149053958 149111848 - Sox5 protein_coding retained_intron MGP_129S1SvImJ_T0000049.1 MGP_129S1SvImJ_G0000040.1 mouse_genomes_project 6 71137690 71137728 + MGP_129S1SvImJ_P0000049 Igkj4 IG_J_gene IG_J_gene MGP_129S1SvImJ_T0078139.1 MGP_129S1SvImJ_G0030889.1 mouse_genomes_project 6 77237751 77244558 - MGP_129S1SvImJ_P0078139 protein_coding protein_coding MGP_129S1SvImJ_T0002058.1 MGP_129S1SvImJ_G0001971.1 mouse_genomes_project 6 81737808 81740478 + TEC TEC MGP_129S1SvImJ_T0081011.1 MGP_129S1SvImJ_G0031489.1 mouse_genomes_project 6 151671039 151680256 + Med21 protein_coding processed_transcript MGP_129S1SvImJ_T0081012.1 MGP_129S1SvImJ_G0031489.1 mouse_genomes_project 6 151671039 151680256 + MGP_129S1SvImJ_P0081012 Med21 protein_coding protein_coding MGP_129S1SvImJ_T0081013.1 MGP_129S1SvImJ_G0031489.1 mouse_genomes_project 6 151671071 151672467 + Med21 protein_coding retained_intron MGP_129S1SvImJ_T0081014.1 MGP_129S1SvImJ_G0031489.1 mouse_genomes_project 6 151671072 151679187 + MGP_129S1SvImJ_P0081014 Med21 protein_coding protein_coding MGP_129S1SvImJ_T0081015.1 MGP_129S1SvImJ_G0031489.1 mouse_genomes_project 6 151671073 151680256 + Med21 protein_coding processed_transcript MGP_129S1SvImJ_T0081016.1 MGP_129S1SvImJ_G0031489.1 mouse_genomes_project 6 151671083 151680386 + MGP_129S1SvImJ_P0081016 Med21 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081017.1 MGP_129S1SvImJ_G0031489.1 mouse_genomes_project 6 151677037 151680256 + Med21 protein_coding retained_intron MGP_129S1SvImJ_T0080938.1 MGP_129S1SvImJ_G0031477.1 mouse_genomes_project 6 150157946 150189354 - Casc1 protein_coding retained_intron MGP_129S1SvImJ_T0080939.1 MGP_129S1SvImJ_G0031477.1 mouse_genomes_project 6 150157946 150195077 - MGP_129S1SvImJ_P0080939 Casc1 protein_coding protein_coding MGP_129S1SvImJ_T0080940.1 MGP_129S1SvImJ_G0031477.1 mouse_genomes_project 6 150157946 150194898 - MGP_129S1SvImJ_P0080940 Casc1 protein_coding protein_coding MGP_129S1SvImJ_T0080941.1 MGP_129S1SvImJ_G0031477.1 mouse_genomes_project 6 150158054 150194981 - MGP_129S1SvImJ_P0080941 Casc1 protein_coding protein_coding MGP_129S1SvImJ_T0080942.1 MGP_129S1SvImJ_G0031477.1 mouse_genomes_project 6 150174433 150195006 - Casc1 protein_coding retained_intron MGP_129S1SvImJ_T0080943.1 MGP_129S1SvImJ_G0031477.1 mouse_genomes_project 6 150177147 150194976 - Casc1 protein_coding processed_transcript MGP_129S1SvImJ_T0080944.1 MGP_129S1SvImJ_G0031477.1 mouse_genomes_project 6 150186892 150194986 - Casc1 protein_coding retained_intron MGP_129S1SvImJ_T0080945.1 MGP_129S1SvImJ_G0031477.1 mouse_genomes_project 6 150188274 150195016 - Casc1 protein_coding retained_intron MGP_129S1SvImJ_T0080946.1 MGP_129S1SvImJ_G0031477.1 mouse_genomes_project 6 150192092 150195112 - Casc1 protein_coding retained_intron MGP_129S1SvImJ_T0011644.1 MGP_129S1SvImJ_G0009760.1 mouse_genomes_project 6 14953538 14953647 + Gm27762 misc_RNA misc_RNA MGP_129S1SvImJ_T0000344.1 MGP_129S1SvImJ_G0000286.1 mouse_genomes_project 6 70686212 70686768 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0010807.1 MGP_129S1SvImJ_G0008923.1 mouse_genomes_project 6 96605314 96605382 + Gm23364 miRNA miRNA MGP_129S1SvImJ_T0015633.1 MGP_129S1SvImJ_G0013722.1 mouse_genomes_project 6 133221718 133222160 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000144.1 MGP_129S1SvImJ_G0000111.1 mouse_genomes_project 6 67875929 67876666 - MGP_129S1SvImJ_P0000144 Igkv1-131 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0077977.1 MGP_129S1SvImJ_G0030861.1 mouse_genomes_project 6 72075600 72121933 - MGP_129S1SvImJ_P0077977 Kdm3a protein_coding protein_coding MGP_129S1SvImJ_T0077978.1 MGP_129S1SvImJ_G0030861.1 mouse_genomes_project 6 72075602 72121714 - MGP_129S1SvImJ_P0077978 Kdm3a protein_coding protein_coding MGP_129S1SvImJ_T0077979.1 MGP_129S1SvImJ_G0030861.1 mouse_genomes_project 6 72075665 72122018 - MGP_129S1SvImJ_P0077979 Kdm3a protein_coding protein_coding MGP_129S1SvImJ_T0077980.1 MGP_129S1SvImJ_G0030861.1 mouse_genomes_project 6 72076756 72078561 - Kdm3a protein_coding retained_intron MGP_129S1SvImJ_T0077981.1 MGP_129S1SvImJ_G0030861.1 mouse_genomes_project 6 72077185 72079200 - Kdm3a protein_coding retained_intron MGP_129S1SvImJ_T0077982.1 MGP_129S1SvImJ_G0030861.1 mouse_genomes_project 6 72080592 72083791 - Kdm3a protein_coding retained_intron MGP_129S1SvImJ_T0077983.1 MGP_129S1SvImJ_G0030861.1 mouse_genomes_project 6 72081237 72096972 - Kdm3a protein_coding processed_transcript MGP_129S1SvImJ_T0077984.1 MGP_129S1SvImJ_G0030861.1 mouse_genomes_project 6 72083580 72086028 - Kdm3a protein_coding retained_intron MGP_129S1SvImJ_T0077985.1 MGP_129S1SvImJ_G0030861.1 mouse_genomes_project 6 72085934 72121714 - MGP_129S1SvImJ_P0077985 Kdm3a protein_coding protein_coding MGP_129S1SvImJ_T0077986.1 MGP_129S1SvImJ_G0030861.1 mouse_genomes_project 6 72086035 72087764 - Kdm3a protein_coding retained_intron MGP_129S1SvImJ_T0077987.1 MGP_129S1SvImJ_G0030861.1 mouse_genomes_project 6 72087331 72100908 - MGP_129S1SvImJ_P0077987 Kdm3a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077988.1 MGP_129S1SvImJ_G0030861.1 mouse_genomes_project 6 72089351 72110578 - Kdm3a protein_coding retained_intron MGP_129S1SvImJ_T0077989.1 MGP_129S1SvImJ_G0030861.1 mouse_genomes_project 6 72089740 72090589 - Kdm3a protein_coding processed_transcript MGP_129S1SvImJ_T0077990.1 MGP_129S1SvImJ_G0030861.1 mouse_genomes_project 6 72100649 72110301 - Kdm3a protein_coding processed_transcript MGP_129S1SvImJ_T0079808.1 MGP_129S1SvImJ_G0031208.1 mouse_genomes_project 6 123685812 123710978 + MGP_129S1SvImJ_P0079808 Slc25a18 protein_coding protein_coding MGP_129S1SvImJ_T0078207.1 MGP_129S1SvImJ_G0030908.1 mouse_genomes_project 6 83939084 84032862 + MGP_129S1SvImJ_P0078207 M1ap protein_coding protein_coding MGP_129S1SvImJ_T0078208.1 MGP_129S1SvImJ_G0030908.1 mouse_genomes_project 6 84003426 84032614 + MGP_129S1SvImJ_P0078208 M1ap protein_coding unknown_likely_coding MGP_129S1SvImJ_T0078209.1 MGP_129S1SvImJ_G0030908.1 mouse_genomes_project 6 84028494 84032988 + MGP_129S1SvImJ_P0078209 M1ap protein_coding protein_coding MGP_129S1SvImJ_T0078210.1 MGP_129S1SvImJ_G0030908.1 mouse_genomes_project 6 84030948 84032500 + M1ap protein_coding retained_intron MGP_129S1SvImJ_T0002201.1 MGP_129S1SvImJ_G0002113.1 mouse_genomes_project 6 150294977 150295887 + TEC TEC MGP_129S1SvImJ_T0079344.1 MGP_129S1SvImJ_G0031127.1 mouse_genomes_project 6 116006205 116016144 + MGP_129S1SvImJ_P0079344 Creld1 protein_coding protein_coding MGP_129S1SvImJ_T0079345.1 MGP_129S1SvImJ_G0031127.1 mouse_genomes_project 6 116006228 116012045 + Creld1 protein_coding retained_intron MGP_129S1SvImJ_T0079346.1 MGP_129S1SvImJ_G0031127.1 mouse_genomes_project 6 116006660 116011214 + Creld1 protein_coding retained_intron MGP_129S1SvImJ_T0079347.1 MGP_129S1SvImJ_G0031127.1 mouse_genomes_project 6 116010299 116012531 + Creld1 protein_coding retained_intron MGP_129S1SvImJ_T0079348.1 MGP_129S1SvImJ_G0031127.1 mouse_genomes_project 6 116014822 116016149 + Creld1 protein_coding retained_intron MGP_129S1SvImJ_T0079349.1 MGP_129S1SvImJ_G0031127.1 mouse_genomes_project 6 116014824 116016141 + Creld1 protein_coding retained_intron MGP_129S1SvImJ_T0008593.1 MGP_129S1SvImJ_G0006950.1 mouse_genomes_project 6 47712999 47716443 - lincRNA lincRNA MGP_129S1SvImJ_T0004951.1 MGP_129S1SvImJ_G0004252.1 mouse_genomes_project 6 32826459 32834640 - Gm14547 antisense antisense MGP_129S1SvImJ_T0008732.1 MGP_129S1SvImJ_G0007058.1 mouse_genomes_project 6 123455703 123463678 + 1700072O05Rik lincRNA lincRNA MGP_129S1SvImJ_T0079975.1 MGP_129S1SvImJ_G0031249.1 mouse_genomes_project 6 126909909 126956886 + MGP_129S1SvImJ_P0079975 Vmn2r23 protein_coding protein_coding MGP_129S1SvImJ_T0078514.1 MGP_129S1SvImJ_G0030968.1 mouse_genomes_project 6 87186497 87207531 - MGP_129S1SvImJ_P0078514 Dusp11 protein_coding protein_coding MGP_129S1SvImJ_T0078515.1 MGP_129S1SvImJ_G0030968.1 mouse_genomes_project 6 87191977 87205187 - MGP_129S1SvImJ_P0078515 Dusp11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078516.1 MGP_129S1SvImJ_G0030968.1 mouse_genomes_project 6 87195619 87196793 - Dusp11 protein_coding retained_intron MGP_129S1SvImJ_T0078517.1 MGP_129S1SvImJ_G0030968.1 mouse_genomes_project 6 87195624 87199852 - Dusp11 protein_coding processed_transcript MGP_129S1SvImJ_T0078518.1 MGP_129S1SvImJ_G0030968.1 mouse_genomes_project 6 87195947 87199736 - Dusp11 protein_coding retained_intron MGP_129S1SvImJ_T0078519.1 MGP_129S1SvImJ_G0030968.1 mouse_genomes_project 6 87200871 87207531 - Dusp11 protein_coding processed_transcript MGP_129S1SvImJ_T0078520.1 MGP_129S1SvImJ_G0030968.1 mouse_genomes_project 6 87200973 87207471 - Dusp11 protein_coding processed_transcript MGP_129S1SvImJ_T0078521.1 MGP_129S1SvImJ_G0030968.1 mouse_genomes_project 6 87206196 87207506 - Dusp11 protein_coding retained_intron MGP_129S1SvImJ_T0077233.1 MGP_129S1SvImJ_G0030657.1 mouse_genomes_project 6 41111516 41114211 - Tcaf3 protein_coding processed_transcript MGP_129S1SvImJ_T0077234.1 MGP_129S1SvImJ_G0030657.1 mouse_genomes_project 6 41113794 41123810 - MGP_129S1SvImJ_P0077234 Tcaf3 protein_coding protein_coding MGP_129S1SvImJ_T0077235.1 MGP_129S1SvImJ_G0030657.1 mouse_genomes_project 6 41120587 41124130 - MGP_129S1SvImJ_P0077235 Tcaf3 protein_coding protein_coding MGP_129S1SvImJ_T0076246.1 MGP_129S1SvImJ_G0030445.1 mouse_genomes_project 6 4731974 4767795 + MGP_129S1SvImJ_P0076246 C1galt1 protein_coding protein_coding MGP_129S1SvImJ_T0081036.1 MGP_129S1SvImJ_G0031494.1 mouse_genomes_project 6 151984169 151988262 - MGP_129S1SvImJ_P0081036 1700034J05Rik protein_coding protein_coding MGP_129S1SvImJ_T0081037.1 MGP_129S1SvImJ_G0031494.1 mouse_genomes_project 6 151985140 151988254 - MGP_129S1SvImJ_P0081037 1700034J05Rik protein_coding protein_coding MGP_129S1SvImJ_T0008747.1 MGP_129S1SvImJ_G0007073.1 mouse_genomes_project 6 132498236 132501211 + Gm26656 lincRNA lincRNA MGP_129S1SvImJ_T0002137.1 MGP_129S1SvImJ_G0002050.1 mouse_genomes_project 6 110864135 110865323 - TEC TEC MGP_129S1SvImJ_T0015564.1 MGP_129S1SvImJ_G0013653.1 mouse_genomes_project 6 116097615 116097840 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080613.1 MGP_129S1SvImJ_G0031416.1 mouse_genomes_project 6 139541107 139583541 + MGP_129S1SvImJ_P0080613 Fam234b protein_coding protein_coding MGP_129S1SvImJ_T0080614.1 MGP_129S1SvImJ_G0031416.1 mouse_genomes_project 6 139541107 139592242 + MGP_129S1SvImJ_P0080614 Fam234b protein_coding protein_coding MGP_129S1SvImJ_T0080615.1 MGP_129S1SvImJ_G0031416.1 mouse_genomes_project 6 139541239 139553560 + MGP_129S1SvImJ_P0080615 Fam234b protein_coding protein_coding MGP_129S1SvImJ_T0080616.1 MGP_129S1SvImJ_G0031416.1 mouse_genomes_project 6 139541542 139553589 + MGP_129S1SvImJ_P0080616 Fam234b protein_coding protein_coding MGP_129S1SvImJ_T0080617.1 MGP_129S1SvImJ_G0031416.1 mouse_genomes_project 6 139578881 139583537 + Fam234b protein_coding retained_intron MGP_129S1SvImJ_T0079366.1 MGP_129S1SvImJ_G0031131.1 mouse_genomes_project 6 116133287 116137242 - MGP_129S1SvImJ_P0079366 Fancd2os protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079367.1 MGP_129S1SvImJ_G0031131.1 mouse_genomes_project 6 116133288 116137242 - MGP_129S1SvImJ_P0079367 Fancd2os protein_coding protein_coding MGP_129S1SvImJ_T0076514.1 MGP_129S1SvImJ_G0030497.1 mouse_genomes_project 6 22179629 22233049 - MGP_129S1SvImJ_P0076514 Wasl protein_coding protein_coding MGP_129S1SvImJ_T0076515.1 MGP_129S1SvImJ_G0030497.1 mouse_genomes_project 6 22193099 22194510 - Wasl protein_coding retained_intron MGP_129S1SvImJ_T0076516.1 MGP_129S1SvImJ_G0030497.1 mouse_genomes_project 6 22199121 22233028 - MGP_129S1SvImJ_P0076516 Wasl protein_coding protein_coding MGP_129S1SvImJ_T0076517.1 MGP_129S1SvImJ_G0030497.1 mouse_genomes_project 6 22205409 22232978 - Wasl protein_coding processed_transcript MGP_129S1SvImJ_T0002752.1 MGP_129S1SvImJ_G0002627.1 mouse_genomes_project 6 39568437 39568726 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0077992.1 MGP_129S1SvImJ_G0030863.1 mouse_genomes_project 6 72316178 72329957 - MGP_129S1SvImJ_P0077992 Mrpl35 protein_coding protein_coding MGP_129S1SvImJ_T0077993.1 MGP_129S1SvImJ_G0030863.1 mouse_genomes_project 6 72322309 72329910 - MGP_129S1SvImJ_P0077993 Mrpl35 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077994.1 MGP_129S1SvImJ_G0030863.1 mouse_genomes_project 6 72323815 72333116 - Mrpl35 protein_coding processed_transcript MGP_129S1SvImJ_T0015426.1 MGP_129S1SvImJ_G0013515.1 mouse_genomes_project 6 67186363 67186828 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018286.1 MGP_129S1SvImJ_G0015629.1 mouse_genomes_project 6 47818421 47833814 - Gm44764 processed_transcript lincRNA MGP_129S1SvImJ_T0018287.1 MGP_129S1SvImJ_G0015629.1 mouse_genomes_project 6 47833001 47833821 - Gm44764 processed_transcript retained_intron MGP_129S1SvImJ_T0101276.1 MGP_129S1SvImJ_G0039343.1 mouse_genomes_project 6 119037133 119037263 - Gm23527 snoRNA snoRNA MGP_129S1SvImJ_T0015250.1 MGP_129S1SvImJ_G0013339.1 mouse_genomes_project 6 1005393 1005489 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002035.1 MGP_129S1SvImJ_G0001948.1 mouse_genomes_project 6 73220361 73221593 - TEC TEC MGP_129S1SvImJ_T0000239.1 MGP_129S1SvImJ_G0000185.1 mouse_genomes_project 6 71013763 71110614 + MGP_129S1SvImJ_P0000239 Igkv3-2 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0102661.1 MGP_129S1SvImJ_G0040494.1 mouse_genomes_project 6 137488407 137490490 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0079742.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122766552 122903583 - MGP_129S1SvImJ_P0079742 Wnk1 protein_coding protein_coding MGP_129S1SvImJ_T0079743.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122766554 122769847 - Wnk1 protein_coding retained_intron MGP_129S1SvImJ_T0079744.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122766556 122903566 - MGP_129S1SvImJ_P0079744 Wnk1 protein_coding protein_coding MGP_129S1SvImJ_T0079745.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122766556 122903566 - MGP_129S1SvImJ_P0079745 Wnk1 protein_coding protein_coding MGP_129S1SvImJ_T0079746.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122767206 122902574 - MGP_129S1SvImJ_P0079746 Wnk1 protein_coding protein_coding MGP_129S1SvImJ_T0079747.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122767206 122902574 - MGP_129S1SvImJ_P0079747 Wnk1 protein_coding protein_coding MGP_129S1SvImJ_T0079748.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122769164 122779017 - MGP_129S1SvImJ_P0079748 Wnk1 protein_coding protein_coding MGP_129S1SvImJ_T0079749.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122769710 122780217 - MGP_129S1SvImJ_P0079749 Wnk1 protein_coding protein_coding MGP_129S1SvImJ_T0079750.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122772418 122776900 - MGP_129S1SvImJ_P0079750 Wnk1 protein_coding protein_coding MGP_129S1SvImJ_T0079751.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122772418 122776901 - MGP_129S1SvImJ_P0079751 Wnk1 protein_coding protein_coding MGP_129S1SvImJ_T0079752.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122773351 122776408 - Wnk1 protein_coding retained_intron MGP_129S1SvImJ_T0079753.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122780027 122790806 - MGP_129S1SvImJ_P0079753 Wnk1 protein_coding protein_coding MGP_129S1SvImJ_T0079754.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122780182 122790485 - MGP_129S1SvImJ_P0079754 Wnk1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079755.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122780302 122782669 - Wnk1 protein_coding retained_intron MGP_129S1SvImJ_T0079756.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122786708 122792528 - Wnk1 protein_coding retained_intron MGP_129S1SvImJ_T0079757.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122792686 122794362 - Wnk1 protein_coding retained_intron MGP_129S1SvImJ_T0079758.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122794014 122812449 - MGP_129S1SvImJ_P0079758 Wnk1 protein_coding protein_coding MGP_129S1SvImJ_T0079759.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122794021 122798534 - MGP_129S1SvImJ_P0079759 Wnk1 protein_coding protein_coding MGP_129S1SvImJ_T0079760.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122795232 122833963 - MGP_129S1SvImJ_P0079760 Wnk1 protein_coding protein_coding MGP_129S1SvImJ_T0079761.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122796013 122903518 - Wnk1 protein_coding retained_intron MGP_129S1SvImJ_T0079762.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122796013 122833922 - Wnk1 protein_coding retained_intron MGP_129S1SvImJ_T0079763.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122798459 122805274 - MGP_129S1SvImJ_P0079763 Wnk1 protein_coding protein_coding MGP_129S1SvImJ_T0079764.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122804651 122806077 - MGP_129S1SvImJ_P0079764 Wnk1 protein_coding protein_coding MGP_129S1SvImJ_T0079765.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122813339 122836325 - Wnk1 protein_coding processed_transcript MGP_129S1SvImJ_T0079766.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122813350 122825230 - Wnk1 protein_coding processed_transcript MGP_129S1SvImJ_T0079767.1 MGP_129S1SvImJ_G0031198.1 mouse_genomes_project 6 122814532 122816850 - Wnk1 protein_coding retained_intron MGP_129S1SvImJ_T0015561.1 MGP_129S1SvImJ_G0013650.1 mouse_genomes_project 6 115464928 115465403 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101957.1 MGP_129S1SvImJ_G0039841.1 mouse_genomes_project 6 134932960 134948435 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101958.1 MGP_129S1SvImJ_G0039841.1 mouse_genomes_project 6 134933023 134949397 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0077756.1 MGP_129S1SvImJ_G0030795.1 mouse_genomes_project 6 56826958 56827993 - MGP_129S1SvImJ_P0077756 Vmn1r16 protein_coding protein_coding MGP_129S1SvImJ_T0004959.1 MGP_129S1SvImJ_G0004259.1 mouse_genomes_project 6 38304747 38305187 - Gm26833 antisense antisense MGP_129S1SvImJ_T0078839.1 MGP_129S1SvImJ_G0031027.1 mouse_genomes_project 6 91439273 91447083 + MGP_129S1SvImJ_P0078839 Vmn1r46 protein_coding protein_coding MGP_129S1SvImJ_T0078840.1 MGP_129S1SvImJ_G0031027.1 mouse_genomes_project 6 91446126 91447056 + MGP_129S1SvImJ_P0078840 Vmn1r46 protein_coding protein_coding MGP_129S1SvImJ_T0078650.1 MGP_129S1SvImJ_G0030990.1 mouse_genomes_project 6 88725343 88731494 + MGP_129S1SvImJ_P0078650 Gkn2 protein_coding protein_coding MGP_129S1SvImJ_T0000142.1 MGP_129S1SvImJ_G0000109.1 mouse_genomes_project 6 67813428 67814204 + MGP_129S1SvImJ_P0000142 Igkv1-135 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000147.1 MGP_129S1SvImJ_G0000113.1 mouse_genomes_project 6 67951661 67952135 + MGP_129S1SvImJ_P0000147 Igkv9-129 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000148.1 MGP_129S1SvImJ_G0000113.1 mouse_genomes_project 6 67951661 67952135 + MGP_129S1SvImJ_P0000148 Igkv9-129 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0077894.1 MGP_129S1SvImJ_G0030837.1 mouse_genomes_project 6 66499613 66506682 - MGP_129S1SvImJ_P0077894 Vmn1r32 protein_coding protein_coding MGP_129S1SvImJ_T0000308.1 MGP_129S1SvImJ_G0000250.1 mouse_genomes_project 6 68374151 68374915 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0077820.1 MGP_129S1SvImJ_G0030820.1 mouse_genomes_project 6 58564255 58664878 - MGP_129S1SvImJ_P0077820 Fam13a protein_coding protein_coding MGP_129S1SvImJ_T0077821.1 MGP_129S1SvImJ_G0030820.1 mouse_genomes_project 6 58567750 58664669 - MGP_129S1SvImJ_P0077821 Fam13a protein_coding protein_coding MGP_129S1SvImJ_T0077822.1 MGP_129S1SvImJ_G0030820.1 mouse_genomes_project 6 58613799 58664751 - Fam13a protein_coding processed_transcript MGP_129S1SvImJ_T0077823.1 MGP_129S1SvImJ_G0030820.1 mouse_genomes_project 6 58643722 58664833 - Fam13a protein_coding retained_intron MGP_129S1SvImJ_T0077824.1 MGP_129S1SvImJ_G0030820.1 mouse_genomes_project 6 58660463 58664772 - Fam13a protein_coding retained_intron MGP_129S1SvImJ_T0002014.1 MGP_129S1SvImJ_G0001927.1 mouse_genomes_project 6 56255856 56257446 + TEC TEC MGP_129S1SvImJ_T0080479.1 MGP_129S1SvImJ_G0031359.1 mouse_genomes_project 6 133404815 133421690 - MGP_129S1SvImJ_P0080479 Klri2 protein_coding protein_coding MGP_129S1SvImJ_T0080137.1 MGP_129S1SvImJ_G0031281.1 mouse_genomes_project 6 128324681 128353267 + Zfp384 protein_coding retained_intron MGP_129S1SvImJ_T0080138.1 MGP_129S1SvImJ_G0031281.1 mouse_genomes_project 6 128324715 128353843 + MGP_129S1SvImJ_P0080138 Zfp384 protein_coding protein_coding MGP_129S1SvImJ_T0080139.1 MGP_129S1SvImJ_G0031281.1 mouse_genomes_project 6 128325841 128359469 + Zfp384 protein_coding retained_intron MGP_129S1SvImJ_T0080140.1 MGP_129S1SvImJ_G0031281.1 mouse_genomes_project 6 128325890 128348994 + Zfp384 protein_coding processed_transcript MGP_129S1SvImJ_T0080141.1 MGP_129S1SvImJ_G0031281.1 mouse_genomes_project 6 128326257 128353812 + MGP_129S1SvImJ_P0080141 Zfp384 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0080142.1 MGP_129S1SvImJ_G0031281.1 mouse_genomes_project 6 128326335 128341390 + Zfp384 protein_coding processed_transcript MGP_129S1SvImJ_T0080143.1 MGP_129S1SvImJ_G0031281.1 mouse_genomes_project 6 128326337 128342003 + MGP_129S1SvImJ_P0080143 Zfp384 protein_coding protein_coding MGP_129S1SvImJ_T0080144.1 MGP_129S1SvImJ_G0031281.1 mouse_genomes_project 6 128326357 128353845 + MGP_129S1SvImJ_P0080144 Zfp384 protein_coding protein_coding MGP_129S1SvImJ_T0080145.1 MGP_129S1SvImJ_G0031281.1 mouse_genomes_project 6 128326358 128353846 + MGP_129S1SvImJ_P0080145 Zfp384 protein_coding protein_coding MGP_129S1SvImJ_T0080146.1 MGP_129S1SvImJ_G0031281.1 mouse_genomes_project 6 128326367 128349877 + Zfp384 protein_coding retained_intron MGP_129S1SvImJ_T0080147.1 MGP_129S1SvImJ_G0031281.1 mouse_genomes_project 6 128326427 128353845 + MGP_129S1SvImJ_P0080147 Zfp384 protein_coding protein_coding MGP_129S1SvImJ_T0080148.1 MGP_129S1SvImJ_G0031281.1 mouse_genomes_project 6 128327014 128353842 + MGP_129S1SvImJ_P0080148 Zfp384 protein_coding protein_coding MGP_129S1SvImJ_T0080149.1 MGP_129S1SvImJ_G0031281.1 mouse_genomes_project 6 128341409 128349873 + Zfp384 protein_coding retained_intron MGP_129S1SvImJ_T0080150.1 MGP_129S1SvImJ_G0031281.1 mouse_genomes_project 6 128347493 128362072 + Zfp384 protein_coding retained_intron MGP_129S1SvImJ_T0015277.1 MGP_129S1SvImJ_G0013366.1 mouse_genomes_project 6 11007738 11008032 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001953.1 MGP_129S1SvImJ_G0001866.1 mouse_genomes_project 6 19142111 19146190 + TEC TEC MGP_129S1SvImJ_T0101254.1 MGP_129S1SvImJ_G0039321.1 mouse_genomes_project 6 67913388 67913524 - Gm24911 snoRNA snoRNA MGP_129S1SvImJ_T0076611.1 MGP_129S1SvImJ_G0030520.1 mouse_genomes_project 6 27135634 27163814 + MGP_129S1SvImJ_P0076611 Calu protein_coding protein_coding MGP_129S1SvImJ_T0076612.1 MGP_129S1SvImJ_G0030520.1 mouse_genomes_project 6 27135634 27163814 + MGP_129S1SvImJ_P0076612 Calu protein_coding protein_coding MGP_129S1SvImJ_T0076613.1 MGP_129S1SvImJ_G0030520.1 mouse_genomes_project 6 27135671 27165986 + MGP_129S1SvImJ_P0076613 Calu protein_coding protein_coding MGP_129S1SvImJ_T0076614.1 MGP_129S1SvImJ_G0030520.1 mouse_genomes_project 6 27135684 27165440 + MGP_129S1SvImJ_P0076614 Calu protein_coding protein_coding MGP_129S1SvImJ_T0076615.1 MGP_129S1SvImJ_G0030520.1 mouse_genomes_project 6 27135694 27165987 + MGP_129S1SvImJ_P0076615 Calu protein_coding protein_coding MGP_129S1SvImJ_T0076616.1 MGP_129S1SvImJ_G0030520.1 mouse_genomes_project 6 27144058 27164336 + MGP_129S1SvImJ_P0076616 Calu protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076617.1 MGP_129S1SvImJ_G0030520.1 mouse_genomes_project 6 27149049 27162653 + MGP_129S1SvImJ_P0076617 Calu protein_coding protein_coding MGP_129S1SvImJ_T0076618.1 MGP_129S1SvImJ_G0030520.1 mouse_genomes_project 6 27161857 27166421 + MGP_129S1SvImJ_P0076618 Calu protein_coding protein_coding MGP_129S1SvImJ_T0076619.1 MGP_129S1SvImJ_G0030520.1 mouse_genomes_project 6 27162966 27164342 + Calu protein_coding processed_transcript MGP_129S1SvImJ_T0008730.1 MGP_129S1SvImJ_G0007056.1 mouse_genomes_project 6 121040998 121049123 - Gm30498 lincRNA lincRNA MGP_129S1SvImJ_T0080639.1 MGP_129S1SvImJ_G0031422.1 mouse_genomes_project 6 140934492 140996242 + MGP_129S1SvImJ_P0080639 Atf7ip protein_coding protein_coding MGP_129S1SvImJ_T0080640.1 MGP_129S1SvImJ_G0031422.1 mouse_genomes_project 6 140946914 141042965 + MGP_129S1SvImJ_P0080640 Atf7ip protein_coding protein_coding MGP_129S1SvImJ_T0080641.1 MGP_129S1SvImJ_G0031422.1 mouse_genomes_project 6 140946918 140993255 + MGP_129S1SvImJ_P0080641 Atf7ip protein_coding protein_coding MGP_129S1SvImJ_T0080642.1 MGP_129S1SvImJ_G0031422.1 mouse_genomes_project 6 140946953 141014288 + MGP_129S1SvImJ_P0080642 Atf7ip protein_coding protein_coding MGP_129S1SvImJ_T0080643.1 MGP_129S1SvImJ_G0031422.1 mouse_genomes_project 6 140946958 140952506 + Atf7ip protein_coding retained_intron MGP_129S1SvImJ_T0080644.1 MGP_129S1SvImJ_G0031422.1 mouse_genomes_project 6 140961225 141018512 + MGP_129S1SvImJ_P0080644 Atf7ip protein_coding protein_coding MGP_129S1SvImJ_T0080645.1 MGP_129S1SvImJ_G0031422.1 mouse_genomes_project 6 140980647 140989371 + MGP_129S1SvImJ_P0080645 Atf7ip protein_coding protein_coding MGP_129S1SvImJ_T0080646.1 MGP_129S1SvImJ_G0031422.1 mouse_genomes_project 6 140983473 140989554 + MGP_129S1SvImJ_P0080646 Atf7ip protein_coding protein_coding MGP_129S1SvImJ_T0080647.1 MGP_129S1SvImJ_G0031422.1 mouse_genomes_project 6 140983491 140984687 + Atf7ip protein_coding retained_intron MGP_129S1SvImJ_T0080648.1 MGP_129S1SvImJ_G0031422.1 mouse_genomes_project 6 140990303 141000692 + MGP_129S1SvImJ_P0080648 Atf7ip protein_coding protein_coding MGP_129S1SvImJ_T0080649.1 MGP_129S1SvImJ_G0031422.1 mouse_genomes_project 6 141007242 141014235 + Atf7ip protein_coding retained_intron MGP_129S1SvImJ_T0080650.1 MGP_129S1SvImJ_G0031422.1 mouse_genomes_project 6 141026387 141040416 + Atf7ip protein_coding retained_intron MGP_129S1SvImJ_T0102625.1 MGP_129S1SvImJ_G0040458.1 mouse_genomes_project 6 62763338 62763669 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0005005.1 MGP_129S1SvImJ_G0004294.1 mouse_genomes_project 6 83635620 83669492 + antisense antisense MGP_129S1SvImJ_T0080815.1 MGP_129S1SvImJ_G0031455.1 mouse_genomes_project 6 146582112 146641080 - MGP_129S1SvImJ_P0080815 Slco1a4 protein_coding protein_coding MGP_129S1SvImJ_T0080816.1 MGP_129S1SvImJ_G0031455.1 mouse_genomes_project 6 146583394 146627779 - MGP_129S1SvImJ_P0080816 Slco1a4 protein_coding protein_coding MGP_129S1SvImJ_T0080817.1 MGP_129S1SvImJ_G0031455.1 mouse_genomes_project 6 146583633 146627779 - MGP_129S1SvImJ_P0080817 Slco1a4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0080818.1 MGP_129S1SvImJ_G0031455.1 mouse_genomes_project 6 146614974 146641108 - MGP_129S1SvImJ_P0080818 Slco1a4 protein_coding protein_coding MGP_129S1SvImJ_T0080819.1 MGP_129S1SvImJ_G0031455.1 mouse_genomes_project 6 146634785 146638591 - Slco1a4 protein_coding retained_intron MGP_129S1SvImJ_T0076361.1 MGP_129S1SvImJ_G0030467.1 mouse_genomes_project 6 14286370 14326605 + MGP_129S1SvImJ_P0076361 Tes protein_coding protein_coding MGP_129S1SvImJ_T0076362.1 MGP_129S1SvImJ_G0030467.1 mouse_genomes_project 6 14286381 14290171 + Tes protein_coding retained_intron MGP_129S1SvImJ_T0076363.1 MGP_129S1SvImJ_G0030467.1 mouse_genomes_project 6 14286389 14318171 + MGP_129S1SvImJ_P0076363 Tes protein_coding protein_coding MGP_129S1SvImJ_T0076364.1 MGP_129S1SvImJ_G0030467.1 mouse_genomes_project 6 14286413 14309655 + Tes protein_coding processed_transcript MGP_129S1SvImJ_T0076365.1 MGP_129S1SvImJ_G0030467.1 mouse_genomes_project 6 14286445 14326610 + MGP_129S1SvImJ_P0076365 Tes protein_coding protein_coding MGP_129S1SvImJ_T0079225.1 MGP_129S1SvImJ_G0031110.1 mouse_genomes_project 6 115174454 115417373 - MGP_129S1SvImJ_P0079225 Srgap3 protein_coding protein_coding MGP_129S1SvImJ_T0079226.1 MGP_129S1SvImJ_G0031110.1 mouse_genomes_project 6 115174457 115416861 - MGP_129S1SvImJ_P0079226 Srgap3 protein_coding protein_coding MGP_129S1SvImJ_T0079227.1 MGP_129S1SvImJ_G0031110.1 mouse_genomes_project 6 115196222 115225730 - MGP_129S1SvImJ_P0079227 Srgap3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079228.1 MGP_129S1SvImJ_G0031110.1 mouse_genomes_project 6 115225356 115417373 - Srgap3 protein_coding retained_intron MGP_129S1SvImJ_T0079229.1 MGP_129S1SvImJ_G0031110.1 mouse_genomes_project 6 115255834 115294764 - Srgap3 protein_coding retained_intron MGP_129S1SvImJ_T0077502.1 MGP_129S1SvImJ_G0030729.1 mouse_genomes_project 6 49393830 49490778 - MGP_129S1SvImJ_P0077502 Osbpl3 protein_coding protein_coding MGP_129S1SvImJ_T0077503.1 MGP_129S1SvImJ_G0030729.1 mouse_genomes_project 6 49395680 49400930 - Osbpl3 protein_coding retained_intron MGP_129S1SvImJ_T0077504.1 MGP_129S1SvImJ_G0030729.1 mouse_genomes_project 6 49396186 49476716 - MGP_129S1SvImJ_P0077504 Osbpl3 protein_coding protein_coding MGP_129S1SvImJ_T0077505.1 MGP_129S1SvImJ_G0030729.1 mouse_genomes_project 6 49397303 49565161 - MGP_129S1SvImJ_P0077505 Osbpl3 protein_coding protein_coding MGP_129S1SvImJ_T0077506.1 MGP_129S1SvImJ_G0030729.1 mouse_genomes_project 6 49397309 49476819 - MGP_129S1SvImJ_P0077506 Osbpl3 protein_coding protein_coding MGP_129S1SvImJ_T0077507.1 MGP_129S1SvImJ_G0030729.1 mouse_genomes_project 6 49400789 49490778 - Osbpl3 protein_coding retained_intron MGP_129S1SvImJ_T0077508.1 MGP_129S1SvImJ_G0030729.1 mouse_genomes_project 6 49427788 49452624 - MGP_129S1SvImJ_P0077508 Osbpl3 protein_coding protein_coding MGP_129S1SvImJ_T0077509.1 MGP_129S1SvImJ_G0030729.1 mouse_genomes_project 6 49448761 49565152 - MGP_129S1SvImJ_P0077509 Osbpl3 protein_coding protein_coding MGP_129S1SvImJ_T0077510.1 MGP_129S1SvImJ_G0030729.1 mouse_genomes_project 6 49453486 49505347 - MGP_129S1SvImJ_P0077510 Osbpl3 protein_coding protein_coding MGP_129S1SvImJ_T0077511.1 MGP_129S1SvImJ_G0030729.1 mouse_genomes_project 6 49519620 49565192 - Osbpl3 protein_coding processed_transcript MGP_129S1SvImJ_T0015445.1 MGP_129S1SvImJ_G0013534.1 mouse_genomes_project 6 69166068 69166520 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010836.1 MGP_129S1SvImJ_G0008952.1 mouse_genomes_project 6 137368279 137368389 + Gm25019 miRNA miRNA MGP_129S1SvImJ_T0101243.1 MGP_129S1SvImJ_G0039310.1 mouse_genomes_project 6 49658730 49658861 - Gm26289 snoRNA snoRNA MGP_129S1SvImJ_T0077300.1 MGP_129S1SvImJ_G0030682.1 mouse_genomes_project 6 46425181 46435797 - MGP_129S1SvImJ_P0077300 Ezh2 protein_coding protein_coding MGP_129S1SvImJ_T0077301.1 MGP_129S1SvImJ_G0030682.1 mouse_genomes_project 6 46425181 46494709 - MGP_129S1SvImJ_P0077301 Ezh2 protein_coding protein_coding MGP_129S1SvImJ_T0077302.1 MGP_129S1SvImJ_G0030682.1 mouse_genomes_project 6 46425181 46494709 - MGP_129S1SvImJ_P0077302 Ezh2 protein_coding protein_coding MGP_129S1SvImJ_T0077303.1 MGP_129S1SvImJ_G0030682.1 mouse_genomes_project 6 46425181 46494709 - MGP_129S1SvImJ_P0077303 Ezh2 protein_coding protein_coding MGP_129S1SvImJ_T0077304.1 MGP_129S1SvImJ_G0030682.1 mouse_genomes_project 6 46425361 46427159 - Ezh2 protein_coding retained_intron MGP_129S1SvImJ_T0077305.1 MGP_129S1SvImJ_G0030682.1 mouse_genomes_project 6 46425583 46475279 - MGP_129S1SvImJ_P0077305 Ezh2 protein_coding protein_coding MGP_129S1SvImJ_T0077306.1 MGP_129S1SvImJ_G0030682.1 mouse_genomes_project 6 46427052 46430168 - Ezh2 protein_coding retained_intron MGP_129S1SvImJ_T0077307.1 MGP_129S1SvImJ_G0030682.1 mouse_genomes_project 6 46427672 46435771 - Ezh2 protein_coding retained_intron MGP_129S1SvImJ_T0077308.1 MGP_129S1SvImJ_G0030682.1 mouse_genomes_project 6 46428784 46440945 - Ezh2 protein_coding retained_intron MGP_129S1SvImJ_T0077309.1 MGP_129S1SvImJ_G0030682.1 mouse_genomes_project 6 46435904 46447012 - MGP_129S1SvImJ_P0077309 Ezh2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077310.1 MGP_129S1SvImJ_G0030682.1 mouse_genomes_project 6 46439067 46447012 - MGP_129S1SvImJ_P0077310 Ezh2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077311.1 MGP_129S1SvImJ_G0030682.1 mouse_genomes_project 6 46440844 46449467 - MGP_129S1SvImJ_P0077311 Ezh2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077312.1 MGP_129S1SvImJ_G0030682.1 mouse_genomes_project 6 46440897 46494737 - MGP_129S1SvImJ_P0077312 Ezh2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077313.1 MGP_129S1SvImJ_G0030682.1 mouse_genomes_project 6 46447636 46495020 - MGP_129S1SvImJ_P0077313 Ezh2 protein_coding protein_coding MGP_129S1SvImJ_T0077314.1 MGP_129S1SvImJ_G0030682.1 mouse_genomes_project 6 46451282 46475629 - Ezh2 protein_coding processed_transcript MGP_129S1SvImJ_T0102623.1 MGP_129S1SvImJ_G0040456.1 mouse_genomes_project 6 58104594 58104889 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002085.1 MGP_129S1SvImJ_G0001998.1 mouse_genomes_project 6 89201760 89204353 - TEC TEC MGP_129S1SvImJ_T0000180.1 MGP_129S1SvImJ_G0000137.1 mouse_genomes_project 6 69095548 69096010 - MGP_129S1SvImJ_P0000180 Igkv12-89 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000181.1 MGP_129S1SvImJ_G0000137.1 mouse_genomes_project 6 69095548 69096010 - MGP_129S1SvImJ_P0000181 Igkv12-89 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0015305.1 MGP_129S1SvImJ_G0013394.1 mouse_genomes_project 6 23595794 23596129 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004931.1 MGP_129S1SvImJ_G0004235.1 mouse_genomes_project 6 15109078 15109672 - Gm26738 antisense antisense MGP_129S1SvImJ_T0002164.1 MGP_129S1SvImJ_G0002076.1 mouse_genomes_project 6 130814289 130816514 + TEC TEC MGP_129S1SvImJ_T0002038.1 MGP_129S1SvImJ_G0001951.1 mouse_genomes_project 6 73496633 73497591 - TEC TEC MGP_129S1SvImJ_T0080297.1 MGP_129S1SvImJ_G0031312.1 mouse_genomes_project 6 130567125 130589482 - MGP_129S1SvImJ_P0080297 Tigar protein_coding protein_coding MGP_129S1SvImJ_T0080298.1 MGP_129S1SvImJ_G0031312.1 mouse_genomes_project 6 130571669 130589489 - MGP_129S1SvImJ_P0080298 Tigar protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0002521.1 MGP_129S1SvImJ_G0002428.1 mouse_genomes_project 6 40051022 40051036 + MGP_129S1SvImJ_P0002521 Trbd2 TR_D_gene TR_D_gene MGP_129S1SvImJ_T0076952.1 MGP_129S1SvImJ_G0030575.1 mouse_genomes_project 6 35027036 35502936 - MGP_129S1SvImJ_P0076952 Dgki protein_coding protein_coding MGP_129S1SvImJ_T0076953.1 MGP_129S1SvImJ_G0030575.1 mouse_genomes_project 6 35027995 35503146 - MGP_129S1SvImJ_P0076953 Dgki protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076954.1 MGP_129S1SvImJ_G0030575.1 mouse_genomes_project 6 35027995 35503146 - MGP_129S1SvImJ_P0076954 Dgki protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076955.1 MGP_129S1SvImJ_G0030575.1 mouse_genomes_project 6 35027995 35503146 - MGP_129S1SvImJ_P0076955 Dgki protein_coding protein_coding MGP_129S1SvImJ_T0076956.1 MGP_129S1SvImJ_G0030575.1 mouse_genomes_project 6 35028170 35502599 - MGP_129S1SvImJ_P0076956 Dgki protein_coding protein_coding MGP_129S1SvImJ_T0076957.1 MGP_129S1SvImJ_G0030575.1 mouse_genomes_project 6 35101573 35222869 - Dgki protein_coding processed_transcript MGP_129S1SvImJ_T0076958.1 MGP_129S1SvImJ_G0030575.1 mouse_genomes_project 6 35226448 35257778 - Dgki protein_coding processed_transcript MGP_129S1SvImJ_T0076959.1 MGP_129S1SvImJ_G0030575.1 mouse_genomes_project 6 35429880 35502706 - Dgki protein_coding processed_transcript MGP_129S1SvImJ_T0077832.1 MGP_129S1SvImJ_G0030825.1 mouse_genomes_project 6 60667964 60694385 + Mmrn1 protein_coding retained_intron MGP_129S1SvImJ_T0077833.1 MGP_129S1SvImJ_G0030825.1 mouse_genomes_project 6 60692742 60746341 + MGP_129S1SvImJ_P0077833 Mmrn1 protein_coding protein_coding MGP_129S1SvImJ_T0077834.1 MGP_129S1SvImJ_G0030825.1 mouse_genomes_project 6 60692744 60746341 + MGP_129S1SvImJ_P0077834 Mmrn1 protein_coding protein_coding MGP_129S1SvImJ_T0079024.1 MGP_129S1SvImJ_G0031068.1 mouse_genomes_project 6 97265080 97514268 - MGP_129S1SvImJ_P0079024 Suclg2 protein_coding protein_coding MGP_129S1SvImJ_T0079025.1 MGP_129S1SvImJ_G0031068.1 mouse_genomes_project 6 97357886 97440067 - Suclg2 protein_coding processed_transcript MGP_129S1SvImJ_T0079026.1 MGP_129S1SvImJ_G0031068.1 mouse_genomes_project 6 97386084 97453505 - MGP_129S1SvImJ_P0079026 Suclg2 protein_coding protein_coding MGP_129S1SvImJ_T0079027.1 MGP_129S1SvImJ_G0031068.1 mouse_genomes_project 6 97450787 97514293 - Suclg2 protein_coding retained_intron MGP_129S1SvImJ_T0080442.1 MGP_129S1SvImJ_G0031348.1 mouse_genomes_project 6 133100091 133122940 - MGP_129S1SvImJ_P0080442 Clec1a protein_coding protein_coding MGP_129S1SvImJ_T0080443.1 MGP_129S1SvImJ_G0031348.1 mouse_genomes_project 6 133101140 133123076 - MGP_129S1SvImJ_P0080443 Clec1a protein_coding protein_coding MGP_129S1SvImJ_T0080444.1 MGP_129S1SvImJ_G0031348.1 mouse_genomes_project 6 133101211 133123060 - MGP_129S1SvImJ_P0080444 Clec1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0002065.1 MGP_129S1SvImJ_G0001978.1 mouse_genomes_project 6 84912156 84914375 + TEC TEC MGP_129S1SvImJ_T0079397.1 MGP_129S1SvImJ_G0031138.1 mouse_genomes_project 6 116290045 116601280 - MGP_129S1SvImJ_P0079397 Atp2b2 protein_coding protein_coding MGP_129S1SvImJ_T0079398.1 MGP_129S1SvImJ_G0031138.1 mouse_genomes_project 6 116290052 116388388 - MGP_129S1SvImJ_P0079398 Atp2b2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0079399.1 MGP_129S1SvImJ_G0031138.1 mouse_genomes_project 6 116291883 116437445 - MGP_129S1SvImJ_P0079399 Atp2b2 protein_coding protein_coding MGP_129S1SvImJ_T0079400.1 MGP_129S1SvImJ_G0031138.1 mouse_genomes_project 6 116291884 116601280 - MGP_129S1SvImJ_P0079400 Atp2b2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079401.1 MGP_129S1SvImJ_G0031138.1 mouse_genomes_project 6 116293280 116437445 - MGP_129S1SvImJ_P0079401 Atp2b2 protein_coding protein_coding MGP_129S1SvImJ_T0079402.1 MGP_129S1SvImJ_G0031138.1 mouse_genomes_project 6 116294508 116484460 - MGP_129S1SvImJ_P0079402 Atp2b2 protein_coding protein_coding MGP_129S1SvImJ_T0079403.1 MGP_129S1SvImJ_G0031138.1 mouse_genomes_project 6 116349423 116437276 - Atp2b2 protein_coding retained_intron MGP_129S1SvImJ_T0079404.1 MGP_129S1SvImJ_G0031138.1 mouse_genomes_project 6 116388388 116456428 - Atp2b2 protein_coding processed_transcript MGP_129S1SvImJ_T0079405.1 MGP_129S1SvImJ_G0031138.1 mouse_genomes_project 6 116388606 116603150 - Atp2b2 protein_coding processed_transcript MGP_129S1SvImJ_T0079308.1 MGP_129S1SvImJ_G0031121.1 mouse_genomes_project 6 115905559 115915756 + MGP_129S1SvImJ_P0079308 Ttll3 protein_coding protein_coding MGP_129S1SvImJ_T0079309.1 MGP_129S1SvImJ_G0031121.1 mouse_genomes_project 6 115907036 115915156 + Ttll3 protein_coding processed_transcript MGP_129S1SvImJ_T0079310.1 MGP_129S1SvImJ_G0031121.1 mouse_genomes_project 6 115908757 115932583 + MGP_129S1SvImJ_P0079310 Ttll3 protein_coding protein_coding MGP_129S1SvImJ_T0079311.1 MGP_129S1SvImJ_G0031121.1 mouse_genomes_project 6 115908796 115932565 + MGP_129S1SvImJ_P0079311 Ttll3 protein_coding protein_coding MGP_129S1SvImJ_T0079312.1 MGP_129S1SvImJ_G0031121.1 mouse_genomes_project 6 115909459 115932579 + MGP_129S1SvImJ_P0079312 Ttll3 protein_coding protein_coding MGP_129S1SvImJ_T0079313.1 MGP_129S1SvImJ_G0031121.1 mouse_genomes_project 6 115909476 115926136 + MGP_129S1SvImJ_P0079313 Ttll3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079314.1 MGP_129S1SvImJ_G0031121.1 mouse_genomes_project 6 115914043 115932558 + Ttll3 protein_coding retained_intron MGP_129S1SvImJ_T0079315.1 MGP_129S1SvImJ_G0031121.1 mouse_genomes_project 6 115925442 115926136 + Ttll3 protein_coding processed_transcript MGP_129S1SvImJ_T0079316.1 MGP_129S1SvImJ_G0031121.1 mouse_genomes_project 6 115930826 115932554 + Ttll3 protein_coding processed_transcript MGP_129S1SvImJ_T0015685.1 MGP_129S1SvImJ_G0013774.1 mouse_genomes_project 6 153797491 153798099 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008716.1 MGP_129S1SvImJ_G0007046.1 mouse_genomes_project 6 118151369 118159886 - Gm44082 lincRNA lincRNA MGP_129S1SvImJ_T0077258.1 MGP_129S1SvImJ_G0030669.1 mouse_genomes_project 6 41703809 41714788 + MGP_129S1SvImJ_P0077258 Olfr441 protein_coding protein_coding MGP_129S1SvImJ_T0077259.1 MGP_129S1SvImJ_G0030669.1 mouse_genomes_project 6 41713023 41714788 + MGP_129S1SvImJ_P0077259 Olfr441 protein_coding protein_coding MGP_129S1SvImJ_T0078047.1 MGP_129S1SvImJ_G0030872.1 mouse_genomes_project 6 72902856 72908615 + MGP_129S1SvImJ_P0078047 Tmem150a protein_coding protein_coding MGP_129S1SvImJ_T0078048.1 MGP_129S1SvImJ_G0030872.1 mouse_genomes_project 6 72902856 72908615 + MGP_129S1SvImJ_P0078048 Tmem150a protein_coding protein_coding MGP_129S1SvImJ_T0078049.1 MGP_129S1SvImJ_G0030872.1 mouse_genomes_project 6 72902883 72907254 + MGP_129S1SvImJ_P0078049 Tmem150a protein_coding protein_coding MGP_129S1SvImJ_T0078050.1 MGP_129S1SvImJ_G0030872.1 mouse_genomes_project 6 72904981 72908154 + Tmem150a protein_coding processed_transcript MGP_129S1SvImJ_T0078051.1 MGP_129S1SvImJ_G0030872.1 mouse_genomes_project 6 72905078 72907605 + MGP_129S1SvImJ_P0078051 Tmem150a protein_coding protein_coding MGP_129S1SvImJ_T0079880.1 MGP_129S1SvImJ_G0031224.1 mouse_genomes_project 6 125386269 125394815 + MGP_129S1SvImJ_P0079880 M6pr protein_coding unknown_likely_coding MGP_129S1SvImJ_T0079881.1 MGP_129S1SvImJ_G0031224.1 mouse_genomes_project 6 125386374 125393799 + M6pr protein_coding retained_intron MGP_129S1SvImJ_T0015294.1 MGP_129S1SvImJ_G0013383.1 mouse_genomes_project 6 18387293 18387846 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079406.1 MGP_129S1SvImJ_G0031139.1 mouse_genomes_project 6 116693514 116815948 + MGP_129S1SvImJ_P0079406 Slc6a11 protein_coding protein_coding MGP_129S1SvImJ_T0079407.1 MGP_129S1SvImJ_G0031139.1 mouse_genomes_project 6 116693692 116694709 + Slc6a11 protein_coding retained_intron MGP_129S1SvImJ_T0078850.1 MGP_129S1SvImJ_G0031034.1 mouse_genomes_project 6 91838399 91852638 - MGP_129S1SvImJ_P0078850 Chst13 protein_coding protein_coding MGP_129S1SvImJ_T0081124.1 MGP_129S1SvImJ_G0031508.1 mouse_genomes_project 6 154249063 154249589 + MGP_129S1SvImJ_P0081124 Gm10203 protein_coding protein_coding MGP_129S1SvImJ_T0001931.1 MGP_129S1SvImJ_G0001844.1 mouse_genomes_project 6 1352249 1355061 - TEC TEC MGP_129S1SvImJ_T0011676.1 MGP_129S1SvImJ_G0009792.1 mouse_genomes_project 6 84728225 84728412 + Gm27772 misc_RNA misc_RNA MGP_129S1SvImJ_T0015651.1 MGP_129S1SvImJ_G0013740.1 mouse_genomes_project 6 136942579 136942952 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015329.1 MGP_129S1SvImJ_G0013418.1 mouse_genomes_project 6 39483602 39483790 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079713.1 MGP_129S1SvImJ_G0031195.1 mouse_genomes_project 6 122285616 122289682 + MGP_129S1SvImJ_P0079713 Fbxl14 protein_coding protein_coding MGP_129S1SvImJ_T0018308.1 MGP_129S1SvImJ_G0015636.1 mouse_genomes_project 6 60019096 60152784 - processed_transcript lincRNA MGP_129S1SvImJ_T0018309.1 MGP_129S1SvImJ_G0015636.1 mouse_genomes_project 6 60144100 60152775 - processed_transcript lincRNA MGP_129S1SvImJ_T0018310.1 MGP_129S1SvImJ_G0015636.1 mouse_genomes_project 6 60144916 60152748 - processed_transcript lincRNA MGP_129S1SvImJ_T0018311.1 MGP_129S1SvImJ_G0015636.1 mouse_genomes_project 6 60144932 60152757 - processed_transcript lincRNA MGP_129S1SvImJ_T0018312.1 MGP_129S1SvImJ_G0015636.1 mouse_genomes_project 6 60150151 60152784 - processed_transcript retained_intron MGP_129S1SvImJ_T0078290.1 MGP_129S1SvImJ_G0030924.1 mouse_genomes_project 6 84156140 84163146 - MGP_129S1SvImJ_P0078290 Wdr54 protein_coding protein_coding MGP_129S1SvImJ_T0078292.1 MGP_129S1SvImJ_G0030924.1 mouse_genomes_project 6 84159480 84162968 - Wdr54 protein_coding retained_intron MGP_129S1SvImJ_T0078293.1 MGP_129S1SvImJ_G0030924.1 mouse_genomes_project 6 84159484 84163113 - Wdr54 protein_coding retained_intron MGP_129S1SvImJ_T0078294.1 MGP_129S1SvImJ_G0030924.1 mouse_genomes_project 6 84160056 84163013 - Wdr54 protein_coding processed_transcript MGP_129S1SvImJ_T0078295.1 MGP_129S1SvImJ_G0030924.1 mouse_genomes_project 6 84161298 84163146 - MGP_129S1SvImJ_P0078295 Wdr54 protein_coding protein_coding MGP_129S1SvImJ_T0078296.1 MGP_129S1SvImJ_G0030924.1 mouse_genomes_project 6 84161956 84163128 - Wdr54 protein_coding processed_transcript MGP_129S1SvImJ_T0076498.1 MGP_129S1SvImJ_G0030490.1 mouse_genomes_project 6 21203231 21204470 - MGP_129S1SvImJ_P0076498 Rnf148 protein_coding protein_coding MGP_129S1SvImJ_T0015676.1 MGP_129S1SvImJ_G0013765.1 mouse_genomes_project 6 147971036 147971239 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080526.1 MGP_129S1SvImJ_G0031388.1 mouse_genomes_project 6 136912490 136963928 + MGP_129S1SvImJ_P0080526 Tas2r117 protein_coding protein_coding MGP_129S1SvImJ_T0079332.1 MGP_129S1SvImJ_G0031125.1 mouse_genomes_project 6 115978713 115980827 + Il17re protein_coding retained_intron MGP_129S1SvImJ_T0079333.1 MGP_129S1SvImJ_G0031125.1 mouse_genomes_project 6 115978759 115990327 + MGP_129S1SvImJ_P0079333 Il17re protein_coding protein_coding MGP_129S1SvImJ_T0079334.1 MGP_129S1SvImJ_G0031125.1 mouse_genomes_project 6 115978786 115990320 + MGP_129S1SvImJ_P0079334 Il17re protein_coding protein_coding MGP_129S1SvImJ_T0079335.1 MGP_129S1SvImJ_G0031125.1 mouse_genomes_project 6 115978847 115990089 + MGP_129S1SvImJ_P0079335 Il17re protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079336.1 MGP_129S1SvImJ_G0031125.1 mouse_genomes_project 6 115978847 115990089 + MGP_129S1SvImJ_P0079336 Il17re protein_coding protein_coding MGP_129S1SvImJ_T0079337.1 MGP_129S1SvImJ_G0031125.1 mouse_genomes_project 6 115984757 115992187 + Il17re protein_coding retained_intron MGP_129S1SvImJ_T0079338.1 MGP_129S1SvImJ_G0031125.1 mouse_genomes_project 6 115986305 115989933 + Il17re protein_coding retained_intron MGP_129S1SvImJ_T0077749.1 MGP_129S1SvImJ_G0030788.1 mouse_genomes_project 6 56501876 56503095 + MGP_129S1SvImJ_P0077749 Vmn1r8 protein_coding protein_coding MGP_129S1SvImJ_T0002172.1 MGP_129S1SvImJ_G0002084.1 mouse_genomes_project 6 131978058 131980581 + TEC TEC MGP_129S1SvImJ_T0015280.1 MGP_129S1SvImJ_G0013369.1 mouse_genomes_project 6 11492913 11493484 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079199.1 MGP_129S1SvImJ_G0031102.1 mouse_genomes_project 6 111070654 111113741 + MGP_129S1SvImJ_P0079199 Arl8b protein_coding protein_coding MGP_129S1SvImJ_T0002199.1 MGP_129S1SvImJ_G0002111.1 mouse_genomes_project 6 150119576 150122734 - TEC TEC MGP_129S1SvImJ_T0000188.1 MGP_129S1SvImJ_G0000143.1 mouse_genomes_project 6 69808598 69809096 - MGP_129S1SvImJ_P0000188 Igkv4-51 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0080458.1 MGP_129S1SvImJ_G0031353.1 mouse_genomes_project 6 133261743 133271522 + MGP_129S1SvImJ_P0080458 Klrd1 protein_coding protein_coding MGP_129S1SvImJ_T0080459.1 MGP_129S1SvImJ_G0031353.1 mouse_genomes_project 6 133261743 133271216 + MGP_129S1SvImJ_P0080459 Klrd1 protein_coding protein_coding MGP_129S1SvImJ_T0080460.1 MGP_129S1SvImJ_G0031353.1 mouse_genomes_project 6 133261771 133271517 + MGP_129S1SvImJ_P0080460 Klrd1 protein_coding protein_coding MGP_129S1SvImJ_T0080461.1 MGP_129S1SvImJ_G0031353.1 mouse_genomes_project 6 133261786 133271360 + MGP_129S1SvImJ_P0080461 Klrd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080462.1 MGP_129S1SvImJ_G0031353.1 mouse_genomes_project 6 133265197 133271200 + MGP_129S1SvImJ_P0080462 Klrd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080463.1 MGP_129S1SvImJ_G0031353.1 mouse_genomes_project 6 133268175 133271199 + Klrd1 protein_coding retained_intron MGP_129S1SvImJ_T0015275.1 MGP_129S1SvImJ_G0013364.1 mouse_genomes_project 6 10127389 10128392 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011657.1 MGP_129S1SvImJ_G0009773.1 mouse_genomes_project 6 46543312 46543389 + Gm25283 misc_RNA misc_RNA MGP_129S1SvImJ_T0102637.1 MGP_129S1SvImJ_G0040470.1 mouse_genomes_project 6 91770306 91771249 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0077147.1 MGP_129S1SvImJ_G0030625.1 mouse_genomes_project 6 39892026 39904544 + MGP_129S1SvImJ_P0077147 protein_coding protein_coding MGP_129S1SvImJ_T0077411.1 MGP_129S1SvImJ_G0030708.1 mouse_genomes_project 6 47676025 47711370 + MGP_129S1SvImJ_P0077411 Gm28053 protein_coding protein_coding MGP_129S1SvImJ_T0077413.1 MGP_129S1SvImJ_G0030708.1 mouse_genomes_project 6 47676072 47687160 + Gm28053 protein_coding retained_intron MGP_129S1SvImJ_T0077417.1 MGP_129S1SvImJ_G0030708.1 mouse_genomes_project 6 47696453 47711414 + MGP_129S1SvImJ_P0077417 Gm28053 protein_coding protein_coding MGP_129S1SvImJ_T0004939.1 MGP_129S1SvImJ_G0004242.1 mouse_genomes_project 6 28473684 28476567 - Gm13781 antisense antisense MGP_129S1SvImJ_T0000186.1 MGP_129S1SvImJ_G0000142.1 mouse_genomes_project 6 69770902 69771438 - MGP_129S1SvImJ_P0000186 Igkv4-53 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000187.1 MGP_129S1SvImJ_G0000142.1 mouse_genomes_project 6 69770902 69771190 - MGP_129S1SvImJ_P0000187 Igkv4-53 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0015619.1 MGP_129S1SvImJ_G0013708.1 mouse_genomes_project 6 130723067 130724006 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079200.1 MGP_129S1SvImJ_G0031103.1 mouse_genomes_project 6 111117087 111163352 + MGP_129S1SvImJ_P0079200 Edem1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079201.1 MGP_129S1SvImJ_G0031103.1 mouse_genomes_project 6 111117120 111163344 + MGP_129S1SvImJ_P0079201 Edem1 protein_coding protein_coding MGP_129S1SvImJ_T0079202.1 MGP_129S1SvImJ_G0031103.1 mouse_genomes_project 6 111135567 111142222 + Edem1 protein_coding processed_transcript MGP_129S1SvImJ_T0079203.1 MGP_129S1SvImJ_G0031103.1 mouse_genomes_project 6 111147665 111152543 + Edem1 protein_coding retained_intron MGP_129S1SvImJ_T0079204.1 MGP_129S1SvImJ_G0031103.1 mouse_genomes_project 6 111153291 111159521 + Edem1 protein_coding retained_intron MGP_129S1SvImJ_T0078185.1 MGP_129S1SvImJ_G0030902.1 mouse_genomes_project 6 82926510 82936395 - MGP_129S1SvImJ_P0078185 Mrpl19 protein_coding protein_coding MGP_129S1SvImJ_T0078186.1 MGP_129S1SvImJ_G0030902.1 mouse_genomes_project 6 82931973 82933258 - Mrpl19 protein_coding retained_intron MGP_129S1SvImJ_T0078187.1 MGP_129S1SvImJ_G0030902.1 mouse_genomes_project 6 82932821 82936044 - Mrpl19 protein_coding processed_transcript MGP_129S1SvImJ_T0015402.1 MGP_129S1SvImJ_G0013491.1 mouse_genomes_project 6 64898127 64899016 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080009.1 MGP_129S1SvImJ_G0031260.1 mouse_genomes_project 6 128007642 128011971 - Emg1 protein_coding retained_intron MGP_129S1SvImJ_T0080010.1 MGP_129S1SvImJ_G0031260.1 mouse_genomes_project 6 128007938 128015726 - MGP_129S1SvImJ_P0080010 Emg1 protein_coding protein_coding MGP_129S1SvImJ_T0080011.1 MGP_129S1SvImJ_G0031260.1 mouse_genomes_project 6 128007939 128009217 - Emg1 protein_coding processed_transcript MGP_129S1SvImJ_T0080012.1 MGP_129S1SvImJ_G0031260.1 mouse_genomes_project 6 128008015 128015617 - Emg1 protein_coding retained_intron MGP_129S1SvImJ_T0080013.1 MGP_129S1SvImJ_G0031260.1 mouse_genomes_project 6 128008508 128015689 - Emg1 protein_coding retained_intron MGP_129S1SvImJ_T0080014.1 MGP_129S1SvImJ_G0031260.1 mouse_genomes_project 6 128008717 128015605 - MGP_129S1SvImJ_P0080014 Emg1 protein_coding protein_coding MGP_129S1SvImJ_T0076519.1 MGP_129S1SvImJ_G0030499.1 mouse_genomes_project 6 22317571 22336077 + MGP_129S1SvImJ_P0076519 Hyal4 protein_coding protein_coding MGP_129S1SvImJ_T0004955.1 MGP_129S1SvImJ_G0004256.1 mouse_genomes_project 6 37473835 37503716 + 4930599N23Rik antisense antisense MGP_129S1SvImJ_T0002012.1 MGP_129S1SvImJ_G0001925.1 mouse_genomes_project 6 54057454 54057866 + TEC TEC MGP_129S1SvImJ_T0005064.1 MGP_129S1SvImJ_G0004326.1 mouse_genomes_project 6 99993509 100128033 + Gm32592 antisense antisense MGP_129S1SvImJ_T0015532.1 MGP_129S1SvImJ_G0013621.1 mouse_genomes_project 6 102783220 102783803 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005023.1 MGP_129S1SvImJ_G0004302.1 mouse_genomes_project 6 85164937 85177781 - Gm15475 antisense antisense MGP_129S1SvImJ_T0078369.1 MGP_129S1SvImJ_G0030939.1 mouse_genomes_project 6 84796914 84802597 + MGP_129S1SvImJ_P0078369 Ankrd53 protein_coding protein_coding MGP_129S1SvImJ_T0078370.1 MGP_129S1SvImJ_G0030939.1 mouse_genomes_project 6 84796956 84802308 + MGP_129S1SvImJ_P0078370 Ankrd53 protein_coding protein_coding MGP_129S1SvImJ_T0002150.1 MGP_129S1SvImJ_G0002063.1 mouse_genomes_project 6 119316637 119319364 + TEC TEC MGP_129S1SvImJ_T0000227.1 MGP_129S1SvImJ_G0000174.1 mouse_genomes_project 6 70770611 70771157 + MGP_129S1SvImJ_P0000227 Igkv6-15 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0015503.1 MGP_129S1SvImJ_G0013592.1 mouse_genomes_project 6 89324288 89324702 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015356.1 MGP_129S1SvImJ_G0013445.1 mouse_genomes_project 6 47945849 47947095 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077591.1 MGP_129S1SvImJ_G0030753.1 mouse_genomes_project 6 52000513 52057094 + MGP_129S1SvImJ_P0077591 Tax1bp1 protein_coding protein_coding MGP_129S1SvImJ_T0077592.1 MGP_129S1SvImJ_G0030753.1 mouse_genomes_project 6 52000534 52021198 + MGP_129S1SvImJ_P0077592 Tax1bp1 protein_coding protein_coding MGP_129S1SvImJ_T0077593.1 MGP_129S1SvImJ_G0030753.1 mouse_genomes_project 6 52000547 52019519 + Tax1bp1 protein_coding retained_intron MGP_129S1SvImJ_T0077594.1 MGP_129S1SvImJ_G0030753.1 mouse_genomes_project 6 52001003 52021232 + MGP_129S1SvImJ_P0077594 Tax1bp1 protein_coding protein_coding MGP_129S1SvImJ_T0077595.1 MGP_129S1SvImJ_G0030753.1 mouse_genomes_project 6 52001134 52015275 + MGP_129S1SvImJ_P0077595 Tax1bp1 protein_coding protein_coding MGP_129S1SvImJ_T0077596.1 MGP_129S1SvImJ_G0030753.1 mouse_genomes_project 6 52029487 52031415 + Tax1bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0077597.1 MGP_129S1SvImJ_G0030753.1 mouse_genomes_project 6 52046499 52052604 + Tax1bp1 protein_coding retained_intron MGP_129S1SvImJ_T0078169.1 MGP_129S1SvImJ_G0030900.1 mouse_genomes_project 6 80870301 81717044 + MGP_129S1SvImJ_P0078169 Lrrtm4 protein_coding protein_coding MGP_129S1SvImJ_T0078170.1 MGP_129S1SvImJ_G0030900.1 mouse_genomes_project 6 80870312 80873153 + MGP_129S1SvImJ_P0078170 Lrrtm4 protein_coding protein_coding MGP_129S1SvImJ_T0078171.1 MGP_129S1SvImJ_G0030900.1 mouse_genomes_project 6 80870342 81716224 + MGP_129S1SvImJ_P0078171 Lrrtm4 protein_coding protein_coding MGP_129S1SvImJ_T0078172.1 MGP_129S1SvImJ_G0030900.1 mouse_genomes_project 6 80870342 80876320 + MGP_129S1SvImJ_P0078172 Lrrtm4 protein_coding protein_coding MGP_129S1SvImJ_T0078173.1 MGP_129S1SvImJ_G0030900.1 mouse_genomes_project 6 80870435 81717042 + MGP_129S1SvImJ_P0078173 Lrrtm4 protein_coding protein_coding MGP_129S1SvImJ_T0078174.1 MGP_129S1SvImJ_G0030900.1 mouse_genomes_project 6 80870472 80877306 + MGP_129S1SvImJ_P0078174 Lrrtm4 protein_coding protein_coding MGP_129S1SvImJ_T0078175.1 MGP_129S1SvImJ_G0030900.1 mouse_genomes_project 6 80870763 80873320 + MGP_129S1SvImJ_P0078175 Lrrtm4 protein_coding protein_coding MGP_129S1SvImJ_T0078176.1 MGP_129S1SvImJ_G0030900.1 mouse_genomes_project 6 80871048 80876328 + MGP_129S1SvImJ_P0078176 Lrrtm4 protein_coding protein_coding MGP_129S1SvImJ_T0015385.1 MGP_129S1SvImJ_G0013474.1 mouse_genomes_project 6 58678930 58681364 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010775.1 MGP_129S1SvImJ_G0008891.1 mouse_genomes_project 6 28645562 28645660 + Mir335 miRNA miRNA MGP_129S1SvImJ_T0015395.1 MGP_129S1SvImJ_G0013484.1 mouse_genomes_project 6 62457346 62457583 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080975.1 MGP_129S1SvImJ_G0031484.1 mouse_genomes_project 6 150963926 151001685 + MGP_129S1SvImJ_P0080975 Sspn protein_coding protein_coding MGP_129S1SvImJ_T0080976.1 MGP_129S1SvImJ_G0031484.1 mouse_genomes_project 6 150965082 151001685 + MGP_129S1SvImJ_P0080976 Sspn protein_coding protein_coding MGP_129S1SvImJ_T0080977.1 MGP_129S1SvImJ_G0031484.1 mouse_genomes_project 6 150984383 151001685 + MGP_129S1SvImJ_P0080977 Sspn protein_coding protein_coding MGP_129S1SvImJ_T0079458.1 MGP_129S1SvImJ_G0031147.1 mouse_genomes_project 6 117852490 117864500 - MGP_129S1SvImJ_P0079458 Timp4 protein_coding protein_coding MGP_129S1SvImJ_T0079459.1 MGP_129S1SvImJ_G0031147.1 mouse_genomes_project 6 117859131 117864149 - MGP_129S1SvImJ_P0079459 Timp4 protein_coding protein_coding MGP_129S1SvImJ_T0080827.1 MGP_129S1SvImJ_G0031458.1 mouse_genomes_project 6 146873079 146963942 - MGP_129S1SvImJ_P0080827 Slco1a6 protein_coding protein_coding MGP_129S1SvImJ_T0080828.1 MGP_129S1SvImJ_G0031458.1 mouse_genomes_project 6 146909946 146963938 - Slco1a6 protein_coding retained_intron MGP_129S1SvImJ_T0080829.1 MGP_129S1SvImJ_G0031458.1 mouse_genomes_project 6 146949035 146987378 - MGP_129S1SvImJ_P0080829 Slco1a6 protein_coding protein_coding MGP_129S1SvImJ_T0005042.1 MGP_129S1SvImJ_G0004313.1 mouse_genomes_project 6 89360372 89363614 + Gm5577 antisense antisense MGP_129S1SvImJ_T0005043.1 MGP_129S1SvImJ_G0004313.1 mouse_genomes_project 6 89361116 89386219 + Gm5577 antisense antisense MGP_129S1SvImJ_T0005044.1 MGP_129S1SvImJ_G0004313.1 mouse_genomes_project 6 89361116 89363606 + Gm5577 antisense antisense MGP_129S1SvImJ_T0005150.1 MGP_129S1SvImJ_G0004397.1 mouse_genomes_project 6 152508667 152543300 - Gm6288 antisense antisense MGP_129S1SvImJ_T0005151.1 MGP_129S1SvImJ_G0004397.1 mouse_genomes_project 6 152542618 152543531 - Gm6288 antisense antisense MGP_129S1SvImJ_T0080867.1 MGP_129S1SvImJ_G0031468.1 mouse_genomes_project 6 147386216 147506514 - MGP_129S1SvImJ_P0080867 Abcc9 protein_coding protein_coding MGP_129S1SvImJ_T0080868.1 MGP_129S1SvImJ_G0031468.1 mouse_genomes_project 6 147386216 147506458 - MGP_129S1SvImJ_P0080868 Abcc9 protein_coding protein_coding MGP_129S1SvImJ_T0080869.1 MGP_129S1SvImJ_G0031468.1 mouse_genomes_project 6 147386216 147506514 - MGP_129S1SvImJ_P0080869 Abcc9 protein_coding protein_coding MGP_129S1SvImJ_T0080870.1 MGP_129S1SvImJ_G0031468.1 mouse_genomes_project 6 147387485 147506458 - MGP_129S1SvImJ_P0080870 Abcc9 protein_coding protein_coding MGP_129S1SvImJ_T0080871.1 MGP_129S1SvImJ_G0031468.1 mouse_genomes_project 6 147393433 147506513 - MGP_129S1SvImJ_P0080871 Abcc9 protein_coding protein_coding MGP_129S1SvImJ_T0080872.1 MGP_129S1SvImJ_G0031468.1 mouse_genomes_project 6 147496210 147506555 - MGP_129S1SvImJ_P0080872 Abcc9 protein_coding protein_coding MGP_129S1SvImJ_T0015494.1 MGP_129S1SvImJ_G0013583.1 mouse_genomes_project 6 86220088 86220845 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001950.1 MGP_129S1SvImJ_G0001863.1 mouse_genomes_project 6 15394122 15395936 - TEC TEC MGP_129S1SvImJ_T0000337.1 MGP_129S1SvImJ_G0000279.1 mouse_genomes_project 6 70042232 70042710 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0005651.1 MGP_129S1SvImJ_G0004760.1 mouse_genomes_project 6 117732655 117739902 - Gm17733 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0002075.1 MGP_129S1SvImJ_G0001988.1 mouse_genomes_project 6 88202803 88204494 + TEC TEC MGP_129S1SvImJ_T0015555.1 MGP_129S1SvImJ_G0013644.1 mouse_genomes_project 6 112710205 112710780 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008633.1 MGP_129S1SvImJ_G0006980.1 mouse_genomes_project 6 67546887 67571722 + Gm42889 lincRNA lincRNA MGP_129S1SvImJ_T0079461.1 MGP_129S1SvImJ_G0031148.1 mouse_genomes_project 6 117973979 118109395 + MGP_129S1SvImJ_P0079461 Pparg protein_coding protein_coding MGP_129S1SvImJ_T0079462.1 MGP_129S1SvImJ_G0031148.1 mouse_genomes_project 6 117975320 118109390 + MGP_129S1SvImJ_P0079462 Pparg protein_coding protein_coding MGP_129S1SvImJ_T0079463.1 MGP_129S1SvImJ_G0031148.1 mouse_genomes_project 6 117975377 118059595 + MGP_129S1SvImJ_P0079463 Pparg protein_coding protein_coding MGP_129S1SvImJ_T0079464.1 MGP_129S1SvImJ_G0031148.1 mouse_genomes_project 6 117975378 117998425 + Pparg protein_coding retained_intron MGP_129S1SvImJ_T0079465.1 MGP_129S1SvImJ_G0031148.1 mouse_genomes_project 6 117998300 118082421 + MGP_129S1SvImJ_P0079465 Pparg protein_coding protein_coding MGP_129S1SvImJ_T0079466.1 MGP_129S1SvImJ_G0031148.1 mouse_genomes_project 6 118040246 118109395 + MGP_129S1SvImJ_P0079466 Pparg protein_coding protein_coding MGP_129S1SvImJ_T0079467.1 MGP_129S1SvImJ_G0031148.1 mouse_genomes_project 6 118058012 118082797 + Pparg protein_coding retained_intron MGP_129S1SvImJ_T0076888.1 MGP_129S1SvImJ_G0030562.1 mouse_genomes_project 6 32883769 32951923 + Agbl3 protein_coding retained_intron MGP_129S1SvImJ_T0076889.1 MGP_129S1SvImJ_G0030562.1 mouse_genomes_project 6 32883769 32964034 + MGP_129S1SvImJ_P0076889 Agbl3 protein_coding protein_coding MGP_129S1SvImJ_T0076890.1 MGP_129S1SvImJ_G0030562.1 mouse_genomes_project 6 32883769 32964034 + MGP_129S1SvImJ_P0076890 Agbl3 protein_coding protein_coding MGP_129S1SvImJ_T0076891.1 MGP_129S1SvImJ_G0030562.1 mouse_genomes_project 6 32883779 32908548 + MGP_129S1SvImJ_P0076891 Agbl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076892.1 MGP_129S1SvImJ_G0030562.1 mouse_genomes_project 6 32883789 32903801 + Agbl3 protein_coding retained_intron MGP_129S1SvImJ_T0076893.1 MGP_129S1SvImJ_G0030562.1 mouse_genomes_project 6 32884185 32965561 + MGP_129S1SvImJ_P0076893 Agbl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076894.1 MGP_129S1SvImJ_G0030562.1 mouse_genomes_project 6 32884212 32910390 + Agbl3 protein_coding retained_intron MGP_129S1SvImJ_T0076895.1 MGP_129S1SvImJ_G0030562.1 mouse_genomes_project 6 32884212 32889057 + MGP_129S1SvImJ_P0076895 Agbl3 protein_coding protein_coding MGP_129S1SvImJ_T0076896.1 MGP_129S1SvImJ_G0030562.1 mouse_genomes_project 6 32884213 32906369 + Agbl3 protein_coding retained_intron MGP_129S1SvImJ_T0076897.1 MGP_129S1SvImJ_G0030562.1 mouse_genomes_project 6 32884226 32888982 + MGP_129S1SvImJ_P0076897 Agbl3 protein_coding protein_coding MGP_129S1SvImJ_T0076898.1 MGP_129S1SvImJ_G0030562.1 mouse_genomes_project 6 32884227 32889021 + MGP_129S1SvImJ_P0076898 Agbl3 protein_coding protein_coding MGP_129S1SvImJ_T0102605.1 MGP_129S1SvImJ_G0040438.1 mouse_genomes_project 6 41690722 41691625 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0098373.1 MGP_129S1SvImJ_G0036458.1 mouse_genomes_project 6 3644439 3645617 - pseudogene pseudogene MGP_129S1SvImJ_T0076638.1 MGP_129S1SvImJ_G0030524.1 mouse_genomes_project 6 27265232 27268012 + MGP_129S1SvImJ_P0076638 Atp6v1f protein_coding protein_coding MGP_129S1SvImJ_T0076639.1 MGP_129S1SvImJ_G0030524.1 mouse_genomes_project 6 27265582 27268012 + MGP_129S1SvImJ_P0076639 Atp6v1f protein_coding protein_coding MGP_129S1SvImJ_T0076640.1 MGP_129S1SvImJ_G0030524.1 mouse_genomes_project 6 27265582 27268012 + MGP_129S1SvImJ_P0076640 Atp6v1f protein_coding protein_coding MGP_129S1SvImJ_T0077145.1 MGP_129S1SvImJ_G0030623.1 mouse_genomes_project 6 39788556 39860115 + MGP_129S1SvImJ_P0077145 protein_coding protein_coding MGP_129S1SvImJ_T0078494.1 MGP_129S1SvImJ_G0030964.1 mouse_genomes_project 6 87103455 87105564 - MGP_129S1SvImJ_P0078494 Nat8f2 protein_coding protein_coding MGP_129S1SvImJ_T0076984.1 MGP_129S1SvImJ_G0030581.1 mouse_genomes_project 6 36384556 36391035 + MGP_129S1SvImJ_P0076984 Tmem213 protein_coding protein_coding MGP_129S1SvImJ_T0001945.1 MGP_129S1SvImJ_G0001858.1 mouse_genomes_project 6 12980634 12982370 + TEC TEC MGP_129S1SvImJ_T0080541.1 MGP_129S1SvImJ_G0031400.1 mouse_genomes_project 6 137772560 137776136 + MGP_129S1SvImJ_P0080541 5530400C23Rik protein_coding protein_coding MGP_129S1SvImJ_T0078158.1 MGP_129S1SvImJ_G0030894.1 mouse_genomes_project 6 79196674 79199666 - MGP_129S1SvImJ_P0078158 Reg3d protein_coding protein_coding MGP_129S1SvImJ_T0078159.1 MGP_129S1SvImJ_G0030894.1 mouse_genomes_project 6 79196674 79199666 - MGP_129S1SvImJ_P0078159 Reg3d protein_coding protein_coding MGP_129S1SvImJ_T0078160.1 MGP_129S1SvImJ_G0030894.1 mouse_genomes_project 6 79196724 79199314 - MGP_129S1SvImJ_P0078160 Reg3d protein_coding protein_coding MGP_129S1SvImJ_T0080296.1 MGP_129S1SvImJ_G0031311.1 mouse_genomes_project 6 130554913 130563418 + MGP_129S1SvImJ_P0080296 Fgf23 protein_coding protein_coding MGP_129S1SvImJ_T0005078.1 MGP_129S1SvImJ_G0004335.1 mouse_genomes_project 6 115548702 115560219 - antisense antisense MGP_129S1SvImJ_T0005079.1 MGP_129S1SvImJ_G0004335.1 mouse_genomes_project 6 115548933 115560205 - antisense antisense MGP_129S1SvImJ_T0005080.1 MGP_129S1SvImJ_G0004335.1 mouse_genomes_project 6 115551672 115560238 - antisense antisense MGP_129S1SvImJ_T0005081.1 MGP_129S1SvImJ_G0004335.1 mouse_genomes_project 6 115552048 115560361 - antisense antisense MGP_129S1SvImJ_T0015691.1 MGP_129S1SvImJ_G0013780.1 mouse_genomes_project 6 154543181 154543631 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001999.1 MGP_129S1SvImJ_G0001912.1 mouse_genomes_project 6 44911400 44915769 + TEC TEC MGP_129S1SvImJ_T0015361.1 MGP_129S1SvImJ_G0013450.1 mouse_genomes_project 6 48163765 48163967 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078040.1 MGP_129S1SvImJ_G0030870.1 mouse_genomes_project 6 72865827 72892678 - MGP_129S1SvImJ_P0078040 Usp39 protein_coding protein_coding MGP_129S1SvImJ_T0078041.1 MGP_129S1SvImJ_G0030870.1 mouse_genomes_project 6 72868449 72881069 - Usp39 protein_coding retained_intron MGP_129S1SvImJ_T0078042.1 MGP_129S1SvImJ_G0030870.1 mouse_genomes_project 6 72883960 72890657 - MGP_129S1SvImJ_P0078042 Usp39 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0000200.1 MGP_129S1SvImJ_G0000155.1 mouse_genomes_project 6 70120934 70121529 - MGP_129S1SvImJ_P0000200 Igkv5-43 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0077480.1 MGP_129S1SvImJ_G0030725.1 mouse_genomes_project 6 48414036 48504953 + MGP_129S1SvImJ_P0077480 Stk31 protein_coding protein_coding MGP_129S1SvImJ_T0077481.1 MGP_129S1SvImJ_G0030725.1 mouse_genomes_project 6 48414067 48504804 + MGP_129S1SvImJ_P0077481 Stk31 protein_coding protein_coding MGP_129S1SvImJ_T0077482.1 MGP_129S1SvImJ_G0030725.1 mouse_genomes_project 6 48414067 48504804 + MGP_129S1SvImJ_P0077482 Stk31 protein_coding protein_coding MGP_129S1SvImJ_T0077483.1 MGP_129S1SvImJ_G0030725.1 mouse_genomes_project 6 48416483 48504954 + MGP_129S1SvImJ_P0077483 Stk31 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0077484.1 MGP_129S1SvImJ_G0030725.1 mouse_genomes_project 6 48467798 48504952 + MGP_129S1SvImJ_P0077484 Stk31 protein_coding protein_coding MGP_129S1SvImJ_T0078352.1 MGP_129S1SvImJ_G0030934.1 mouse_genomes_project 6 84549671 84579446 - Stambp protein_coding retained_intron MGP_129S1SvImJ_T0078353.1 MGP_129S1SvImJ_G0030934.1 mouse_genomes_project 6 84549677 84579452 - MGP_129S1SvImJ_P0078353 Stambp protein_coding protein_coding MGP_129S1SvImJ_T0078354.1 MGP_129S1SvImJ_G0030934.1 mouse_genomes_project 6 84549684 84579748 - MGP_129S1SvImJ_P0078354 Stambp protein_coding protein_coding MGP_129S1SvImJ_T0078355.1 MGP_129S1SvImJ_G0030934.1 mouse_genomes_project 6 84549814 84558593 - Stambp protein_coding retained_intron MGP_129S1SvImJ_T0078356.1 MGP_129S1SvImJ_G0030934.1 mouse_genomes_project 6 84550213 84579436 - MGP_129S1SvImJ_P0078356 Stambp protein_coding protein_coding MGP_129S1SvImJ_T0078357.1 MGP_129S1SvImJ_G0030934.1 mouse_genomes_project 6 84558017 84558421 - Stambp protein_coding retained_intron MGP_129S1SvImJ_T0078358.1 MGP_129S1SvImJ_G0030934.1 mouse_genomes_project 6 84578151 84579458 - Stambp protein_coding retained_intron MGP_129S1SvImJ_T0005039.1 MGP_129S1SvImJ_G0004310.1 mouse_genomes_project 6 89016079 89023241 + Gm44097 antisense antisense MGP_129S1SvImJ_T0077543.1 MGP_129S1SvImJ_G0030737.1 mouse_genomes_project 6 51070630 51230570 - MGP_129S1SvImJ_P0077543 Skap2 protein_coding protein_coding MGP_129S1SvImJ_T0077544.1 MGP_129S1SvImJ_G0030737.1 mouse_genomes_project 6 51072312 51085999 - Skap2 protein_coding processed_transcript MGP_129S1SvImJ_T0077545.1 MGP_129S1SvImJ_G0030737.1 mouse_genomes_project 6 51072374 51230536 - MGP_129S1SvImJ_P0077545 Skap2 protein_coding protein_coding MGP_129S1SvImJ_T0077546.1 MGP_129S1SvImJ_G0030737.1 mouse_genomes_project 6 51073264 51124406 - MGP_129S1SvImJ_P0077546 Skap2 protein_coding protein_coding MGP_129S1SvImJ_T0077547.1 MGP_129S1SvImJ_G0030737.1 mouse_genomes_project 6 51083337 51086740 - Skap2 protein_coding retained_intron MGP_129S1SvImJ_T0077548.1 MGP_129S1SvImJ_G0030737.1 mouse_genomes_project 6 51088541 51148407 - Skap2 protein_coding processed_transcript MGP_129S1SvImJ_T0077549.1 MGP_129S1SvImJ_G0030737.1 mouse_genomes_project 6 51207346 51230553 - Skap2 protein_coding retained_intron MGP_129S1SvImJ_T0098763.1 MGP_129S1SvImJ_G0036848.1 mouse_genomes_project 6 143840909 143841076 - Gm25434 scaRNA scaRNA MGP_129S1SvImJ_T0079205.1 MGP_129S1SvImJ_G0031104.1 mouse_genomes_project 6 113009954 113968387 + MGP_129S1SvImJ_P0079205 Grm7 protein_coding protein_coding MGP_129S1SvImJ_T0079206.1 MGP_129S1SvImJ_G0031104.1 mouse_genomes_project 6 113009954 113898073 + MGP_129S1SvImJ_P0079206 Grm7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079207.1 MGP_129S1SvImJ_G0031104.1 mouse_genomes_project 6 113009955 113969550 + MGP_129S1SvImJ_P0079207 Grm7 protein_coding protein_coding MGP_129S1SvImJ_T0079208.1 MGP_129S1SvImJ_G0031104.1 mouse_genomes_project 6 113896698 113900893 + MGP_129S1SvImJ_P0079208 Grm7 protein_coding protein_coding MGP_129S1SvImJ_T0079209.1 MGP_129S1SvImJ_G0031104.1 mouse_genomes_project 6 113896727 113903244 + MGP_129S1SvImJ_P0079209 Grm7 protein_coding protein_coding MGP_129S1SvImJ_T0080227.1 MGP_129S1SvImJ_G0031295.1 mouse_genomes_project 6 128670345 128680100 + MGP_129S1SvImJ_P0080227 Scnn1a protein_coding protein_coding MGP_129S1SvImJ_T0080228.1 MGP_129S1SvImJ_G0031295.1 mouse_genomes_project 6 128670419 128693536 + MGP_129S1SvImJ_P0080228 Scnn1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080229.1 MGP_129S1SvImJ_G0031295.1 mouse_genomes_project 6 128670661 128693759 + MGP_129S1SvImJ_P0080229 Scnn1a protein_coding protein_coding MGP_129S1SvImJ_T0080230.1 MGP_129S1SvImJ_G0031295.1 mouse_genomes_project 6 128671021 128694096 + MGP_129S1SvImJ_P0080230 Scnn1a protein_coding protein_coding MGP_129S1SvImJ_T0077826.1 MGP_129S1SvImJ_G0030822.1 mouse_genomes_project 6 58979630 59062168 - MGP_129S1SvImJ_P0077826 Gprin3 protein_coding protein_coding MGP_129S1SvImJ_T0005001.1 MGP_129S1SvImJ_G0004290.1 mouse_genomes_project 6 73279663 73285540 + Gm15402 antisense antisense MGP_129S1SvImJ_T0005097.1 MGP_129S1SvImJ_G0004351.1 mouse_genomes_project 6 125930355 125937298 - Gm26826 antisense antisense MGP_129S1SvImJ_T0002037.1 MGP_129S1SvImJ_G0001950.1 mouse_genomes_project 6 73329480 73332282 - TEC TEC MGP_129S1SvImJ_T0008666.1 MGP_129S1SvImJ_G0007007.1 mouse_genomes_project 6 87805567 87807933 - Gm44386 lincRNA lincRNA MGP_129S1SvImJ_T0077531.1 MGP_129S1SvImJ_G0030735.1 mouse_genomes_project 6 50658760 50671328 + MGP_129S1SvImJ_P0077531 Cbx3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0077532.1 MGP_129S1SvImJ_G0030735.1 mouse_genomes_project 6 50659300 50663922 + Cbx3 protein_coding retained_intron MGP_129S1SvImJ_T0077533.1 MGP_129S1SvImJ_G0030735.1 mouse_genomes_project 6 50659314 50660698 + Cbx3 protein_coding retained_intron MGP_129S1SvImJ_T0077534.1 MGP_129S1SvImJ_G0030735.1 mouse_genomes_project 6 50659383 50667322 + MGP_129S1SvImJ_P0077534 Cbx3 protein_coding protein_coding MGP_129S1SvImJ_T0077535.1 MGP_129S1SvImJ_G0030735.1 mouse_genomes_project 6 50666179 50669105 + Cbx3 protein_coding retained_intron MGP_129S1SvImJ_T0015575.1 MGP_129S1SvImJ_G0013664.1 mouse_genomes_project 6 119306159 119308490 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015598.1 MGP_129S1SvImJ_G0013687.1 mouse_genomes_project 6 125500499 125500793 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098994.1 MGP_129S1SvImJ_G0037068.1 mouse_genomes_project 6 139186586 139188987 - Gm44366 sense_intronic sense_intronic MGP_129S1SvImJ_T0008645.1 MGP_129S1SvImJ_G0006992.1 mouse_genomes_project 6 74192826 74212896 - Gm31747 lincRNA lincRNA MGP_129S1SvImJ_T0015309.1 MGP_129S1SvImJ_G0013398.1 mouse_genomes_project 6 27801209 27802362 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076922.1 MGP_129S1SvImJ_G0030567.1 mouse_genomes_project 6 33065515 33097666 - MGP_129S1SvImJ_P0076922 protein_coding protein_coding MGP_129S1SvImJ_T0076923.1 MGP_129S1SvImJ_G0030567.1 mouse_genomes_project 6 33066172 33108076 - MGP_129S1SvImJ_P0076923 protein_coding protein_coding MGP_129S1SvImJ_T0076924.1 MGP_129S1SvImJ_G0030567.1 mouse_genomes_project 6 33067740 33068815 - protein_coding processed_transcript MGP_129S1SvImJ_T0076925.1 MGP_129S1SvImJ_G0030567.1 mouse_genomes_project 6 33068673 33076141 - MGP_129S1SvImJ_P0076925 protein_coding protein_coding MGP_129S1SvImJ_T0076926.1 MGP_129S1SvImJ_G0030567.1 mouse_genomes_project 6 33074076 33098721 - MGP_129S1SvImJ_P0076926 protein_coding protein_coding MGP_129S1SvImJ_T0078163.1 MGP_129S1SvImJ_G0030897.1 mouse_genomes_project 6 79237688 79243650 + MGP_129S1SvImJ_P0078163 Reg1 protein_coding protein_coding MGP_129S1SvImJ_T0078164.1 MGP_129S1SvImJ_G0030897.1 mouse_genomes_project 6 79237748 79243650 + MGP_129S1SvImJ_P0078164 Reg1 protein_coding protein_coding MGP_129S1SvImJ_T0078165.1 MGP_129S1SvImJ_G0030897.1 mouse_genomes_project 6 79240965 79243649 + MGP_129S1SvImJ_P0078165 Reg1 protein_coding protein_coding MGP_129S1SvImJ_T0015299.1 MGP_129S1SvImJ_G0013388.1 mouse_genomes_project 6 20243421 20244189 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080167.1 MGP_129S1SvImJ_G0031284.1 mouse_genomes_project 6 128392850 128407402 + MGP_129S1SvImJ_P0080167 Lpar5 protein_coding protein_coding MGP_129S1SvImJ_T0080168.1 MGP_129S1SvImJ_G0031284.1 mouse_genomes_project 6 128396206 128406738 + MGP_129S1SvImJ_P0080168 Lpar5 protein_coding protein_coding MGP_129S1SvImJ_T0080169.1 MGP_129S1SvImJ_G0031284.1 mouse_genomes_project 6 128396206 128407402 + MGP_129S1SvImJ_P0080169 Lpar5 protein_coding protein_coding MGP_129S1SvImJ_T0015681.1 MGP_129S1SvImJ_G0013770.1 mouse_genomes_project 6 152065760 152066219 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076870.1 MGP_129S1SvImJ_G0030561.1 mouse_genomes_project 6 32688029 32877123 + MGP_129S1SvImJ_P0076870 Cald1 protein_coding protein_coding MGP_129S1SvImJ_T0076871.1 MGP_129S1SvImJ_G0030561.1 mouse_genomes_project 6 32688041 32853744 + MGP_129S1SvImJ_P0076871 Cald1 protein_coding protein_coding MGP_129S1SvImJ_T0076872.1 MGP_129S1SvImJ_G0030561.1 mouse_genomes_project 6 32688073 32785940 + Cald1 protein_coding retained_intron MGP_129S1SvImJ_T0076873.1 MGP_129S1SvImJ_G0030561.1 mouse_genomes_project 6 32688073 32841467 + Cald1 protein_coding retained_intron MGP_129S1SvImJ_T0076874.1 MGP_129S1SvImJ_G0030561.1 mouse_genomes_project 6 32688093 32877135 + MGP_129S1SvImJ_P0076874 Cald1 protein_coding protein_coding MGP_129S1SvImJ_T0076875.1 MGP_129S1SvImJ_G0030561.1 mouse_genomes_project 6 32688094 32877135 + MGP_129S1SvImJ_P0076875 Cald1 protein_coding protein_coding MGP_129S1SvImJ_T0076876.1 MGP_129S1SvImJ_G0030561.1 mouse_genomes_project 6 32688153 32758976 + Cald1 protein_coding retained_intron MGP_129S1SvImJ_T0076877.1 MGP_129S1SvImJ_G0030561.1 mouse_genomes_project 6 32808717 32877142 + MGP_129S1SvImJ_P0076877 Cald1 protein_coding protein_coding MGP_129S1SvImJ_T0076878.1 MGP_129S1SvImJ_G0030561.1 mouse_genomes_project 6 32808765 32810030 + Cald1 protein_coding retained_intron MGP_129S1SvImJ_T0076879.1 MGP_129S1SvImJ_G0030561.1 mouse_genomes_project 6 32808765 32877137 + MGP_129S1SvImJ_P0076879 Cald1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076880.1 MGP_129S1SvImJ_G0030561.1 mouse_genomes_project 6 32808909 32875363 + MGP_129S1SvImJ_P0076880 Cald1 protein_coding protein_coding MGP_129S1SvImJ_T0076881.1 MGP_129S1SvImJ_G0030561.1 mouse_genomes_project 6 32846123 32856049 + MGP_129S1SvImJ_P0076881 Cald1 protein_coding protein_coding MGP_129S1SvImJ_T0076882.1 MGP_129S1SvImJ_G0030561.1 mouse_genomes_project 6 32846152 32855959 + MGP_129S1SvImJ_P0076882 Cald1 protein_coding protein_coding MGP_129S1SvImJ_T0076883.1 MGP_129S1SvImJ_G0030561.1 mouse_genomes_project 6 32846178 32855959 + MGP_129S1SvImJ_P0076883 Cald1 protein_coding protein_coding MGP_129S1SvImJ_T0076884.1 MGP_129S1SvImJ_G0030561.1 mouse_genomes_project 6 32846557 32863783 + MGP_129S1SvImJ_P0076884 Cald1 protein_coding protein_coding MGP_129S1SvImJ_T0076885.1 MGP_129S1SvImJ_G0030561.1 mouse_genomes_project 6 32847941 32853663 + Cald1 protein_coding retained_intron MGP_129S1SvImJ_T0076886.1 MGP_129S1SvImJ_G0030561.1 mouse_genomes_project 6 32864516 32868499 + Cald1 protein_coding retained_intron MGP_129S1SvImJ_T0076887.1 MGP_129S1SvImJ_G0030561.1 mouse_genomes_project 6 32866625 32868309 + Cald1 protein_coding retained_intron MGP_129S1SvImJ_T0008764.1 MGP_129S1SvImJ_G0007081.1 mouse_genomes_project 6 139657215 139668338 - Gm44275 lincRNA lincRNA MGP_129S1SvImJ_T0078643.1 MGP_129S1SvImJ_G0030988.1 mouse_genomes_project 6 88475128 88684568 - MGP_129S1SvImJ_P0078643 Antxr1 protein_coding protein_coding MGP_129S1SvImJ_T0078644.1 MGP_129S1SvImJ_G0030988.1 mouse_genomes_project 6 88475131 88656208 - MGP_129S1SvImJ_P0078644 Antxr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078645.1 MGP_129S1SvImJ_G0030988.1 mouse_genomes_project 6 88504782 88684528 - MGP_129S1SvImJ_P0078645 Antxr1 protein_coding protein_coding MGP_129S1SvImJ_T0078646.1 MGP_129S1SvImJ_G0030988.1 mouse_genomes_project 6 88525441 88684568 - MGP_129S1SvImJ_P0078646 Antxr1 protein_coding protein_coding MGP_129S1SvImJ_T0078647.1 MGP_129S1SvImJ_G0030988.1 mouse_genomes_project 6 88546515 88617147 - Antxr1 protein_coding processed_transcript MGP_129S1SvImJ_T0078648.1 MGP_129S1SvImJ_G0030988.1 mouse_genomes_project 6 88627426 88684624 - Antxr1 protein_coding retained_intron MGP_129S1SvImJ_T0080712.1 MGP_129S1SvImJ_G0031437.1 mouse_genomes_project 6 142298415 142315390 + MGP_129S1SvImJ_P0080712 Strap protein_coding protein_coding MGP_129S1SvImJ_T0080713.1 MGP_129S1SvImJ_G0031437.1 mouse_genomes_project 6 142308508 142312195 + Strap protein_coding processed_transcript MGP_129S1SvImJ_T0080714.1 MGP_129S1SvImJ_G0031437.1 mouse_genomes_project 6 142312666 142314134 + Strap protein_coding retained_intron MGP_129S1SvImJ_T0011664.1 MGP_129S1SvImJ_G0009780.1 mouse_genomes_project 6 51488043 51488139 + Gm28032 misc_RNA misc_RNA MGP_129S1SvImJ_T0100032.1 MGP_129S1SvImJ_G0038099.1 mouse_genomes_project 6 133916665 133916739 + Gm22621 snRNA snRNA MGP_129S1SvImJ_T0008590.1 MGP_129S1SvImJ_G0006947.1 mouse_genomes_project 6 47046491 47072822 - lincRNA lincRNA MGP_129S1SvImJ_T0101251.1 MGP_129S1SvImJ_G0039318.1 mouse_genomes_project 6 59336389 59336518 - Gm22622 snoRNA snoRNA MGP_129S1SvImJ_T0100030.1 MGP_129S1SvImJ_G0038097.1 mouse_genomes_project 6 133599008 133599082 + Gm23977 snRNA snRNA MGP_129S1SvImJ_T0005038.1 MGP_129S1SvImJ_G0004309.1 mouse_genomes_project 6 88624648 88626654 + Gm44418 antisense antisense MGP_129S1SvImJ_T0102641.1 MGP_129S1SvImJ_G0040474.1 mouse_genomes_project 6 127400678 127401582 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0008539.1 MGP_129S1SvImJ_G0006916.1 mouse_genomes_project 6 28172877 28203752 + 1700095J07Rik lincRNA lincRNA MGP_129S1SvImJ_T0008540.1 MGP_129S1SvImJ_G0006916.1 mouse_genomes_project 6 28172893 28176041 + 1700095J07Rik lincRNA lincRNA MGP_129S1SvImJ_T0015642.1 MGP_129S1SvImJ_G0013731.1 mouse_genomes_project 6 135221849 135222585 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078721.1 MGP_129S1SvImJ_G0031006.1 mouse_genomes_project 6 89466146 89489547 + MGP_129S1SvImJ_P0078721 Rpn1 protein_coding protein_coding MGP_129S1SvImJ_T0078722.1 MGP_129S1SvImJ_G0031006.1 mouse_genomes_project 6 89466227 89478750 + MGP_129S1SvImJ_P0078722 Rpn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078723.1 MGP_129S1SvImJ_G0031006.1 mouse_genomes_project 6 89477004 89485348 + Rpn1 protein_coding retained_intron MGP_129S1SvImJ_T0078724.1 MGP_129S1SvImJ_G0031006.1 mouse_genomes_project 6 89483529 89485605 + Rpn1 protein_coding retained_intron MGP_129S1SvImJ_T0078725.1 MGP_129S1SvImJ_G0031006.1 mouse_genomes_project 6 89485813 89487630 + Rpn1 protein_coding retained_intron MGP_129S1SvImJ_T0015334.1 MGP_129S1SvImJ_G0013423.1 mouse_genomes_project 6 41041932 41042730 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008800.1 MGP_129S1SvImJ_G0007107.1 mouse_genomes_project 6 154025655 154030973 - Gm43913 lincRNA lincRNA MGP_129S1SvImJ_T0010779.1 MGP_129S1SvImJ_G0008895.1 mouse_genomes_project 6 34581844 34581928 + Mir490 miRNA miRNA MGP_129S1SvImJ_T0079898.1 MGP_129S1SvImJ_G0031226.1 mouse_genomes_project 6 125533863 125552787 - MGP_129S1SvImJ_P0079898 Rimklb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079899.1 MGP_129S1SvImJ_G0031226.1 mouse_genomes_project 6 125533865 125539298 - Rimklb protein_coding processed_transcript MGP_129S1SvImJ_T0079900.1 MGP_129S1SvImJ_G0031226.1 mouse_genomes_project 6 125539666 125573925 - MGP_129S1SvImJ_P0079900 Rimklb protein_coding protein_coding MGP_129S1SvImJ_T0079901.1 MGP_129S1SvImJ_G0031226.1 mouse_genomes_project 6 125540825 125552735 - MGP_129S1SvImJ_P0079901 Rimklb protein_coding protein_coding MGP_129S1SvImJ_T0079902.1 MGP_129S1SvImJ_G0031226.1 mouse_genomes_project 6 125545438 125558757 - Rimklb protein_coding processed_transcript MGP_129S1SvImJ_T0079903.1 MGP_129S1SvImJ_G0031226.1 mouse_genomes_project 6 125550365 125573859 - MGP_129S1SvImJ_P0079903 Rimklb protein_coding protein_coding MGP_129S1SvImJ_T0079904.1 MGP_129S1SvImJ_G0031226.1 mouse_genomes_project 6 125558740 125587915 - MGP_129S1SvImJ_P0079904 Rimklb protein_coding protein_coding MGP_129S1SvImJ_T0098626.1 MGP_129S1SvImJ_G0036711.1 mouse_genomes_project 6 136661156 136661277 + n-R5s167 rRNA rRNA MGP_129S1SvImJ_T0081029.1 MGP_129S1SvImJ_G0031492.1 mouse_genomes_project 6 151881490 151909137 + MGP_129S1SvImJ_P0081029 Smco2 protein_coding protein_coding MGP_129S1SvImJ_T0081030.1 MGP_129S1SvImJ_G0031492.1 mouse_genomes_project 6 151881543 151889464 + Smco2 protein_coding retained_intron MGP_129S1SvImJ_T0081031.1 MGP_129S1SvImJ_G0031492.1 mouse_genomes_project 6 151890149 151897200 + Smco2 protein_coding processed_transcript MGP_129S1SvImJ_T0081032.1 MGP_129S1SvImJ_G0031492.1 mouse_genomes_project 6 151894939 151905206 + Smco2 protein_coding processed_transcript MGP_129S1SvImJ_T0002590.1 MGP_129S1SvImJ_G0002492.1 mouse_genomes_project 6 40043102 40043147 + Trbj1-7 TR_J_gene processed_transcript MGP_129S1SvImJ_T0002591.1 MGP_129S1SvImJ_G0002492.1 mouse_genomes_project 6 40043102 40043148 + MGP_129S1SvImJ_P0002591 Trbj1-7 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0000323.1 MGP_129S1SvImJ_G0000265.1 mouse_genomes_project 6 69148119 69148522 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0004932.1 MGP_129S1SvImJ_G0004236.1 mouse_genomes_project 6 15552508 15575247 - Gm15592 antisense antisense MGP_129S1SvImJ_T0010829.1 MGP_129S1SvImJ_G0008945.1 mouse_genomes_project 6 128530559 128530646 + Mir3098 miRNA miRNA MGP_129S1SvImJ_T0101281.1 MGP_129S1SvImJ_G0039348.1 mouse_genomes_project 6 126948570 126948697 - Gm22724 snoRNA snoRNA MGP_129S1SvImJ_T0077655.1 MGP_129S1SvImJ_G0030764.1 mouse_genomes_project 6 54044580 54070285 + MGP_129S1SvImJ_P0077655 Mturn protein_coding protein_coding MGP_129S1SvImJ_T0077656.1 MGP_129S1SvImJ_G0030764.1 mouse_genomes_project 6 54045564 54067576 + MGP_129S1SvImJ_P0077656 Mturn protein_coding protein_coding MGP_129S1SvImJ_T0077657.1 MGP_129S1SvImJ_G0030764.1 mouse_genomes_project 6 54045612 54053332 + Mturn protein_coding retained_intron MGP_129S1SvImJ_T0080814.1 MGP_129S1SvImJ_G0031454.1 mouse_genomes_project 6 146464015 146549328 - MGP_129S1SvImJ_P0080814 Gm5724 protein_coding protein_coding MGP_129S1SvImJ_T0002127.1 MGP_129S1SvImJ_G0002040.1 mouse_genomes_project 6 103420524 103423377 - TEC TEC MGP_129S1SvImJ_T0076415.1 MGP_129S1SvImJ_G0030474.1 mouse_genomes_project 6 15335486 15393024 - MGP_129S1SvImJ_P0076415 Asz1 protein_coding protein_coding MGP_129S1SvImJ_T0076416.1 MGP_129S1SvImJ_G0030474.1 mouse_genomes_project 6 15335505 15393011 - Asz1 protein_coding retained_intron MGP_129S1SvImJ_T0076417.1 MGP_129S1SvImJ_G0030474.1 mouse_genomes_project 6 15353403 15354706 - Asz1 protein_coding retained_intron MGP_129S1SvImJ_T0076418.1 MGP_129S1SvImJ_G0030474.1 mouse_genomes_project 6 15355374 15393012 - MGP_129S1SvImJ_P0076418 Asz1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076419.1 MGP_129S1SvImJ_G0030474.1 mouse_genomes_project 6 15356661 15393028 - Asz1 protein_coding processed_transcript MGP_129S1SvImJ_T0015419.1 MGP_129S1SvImJ_G0013508.1 mouse_genomes_project 6 66347398 66347624 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008727.1 MGP_129S1SvImJ_G0007053.1 mouse_genomes_project 6 120617172 120617493 + Gm29509 lincRNA lincRNA MGP_129S1SvImJ_T0077458.1 MGP_129S1SvImJ_G0030720.1 mouse_genomes_project 6 48059042 48071821 + MGP_129S1SvImJ_P0077458 Malsu1 protein_coding protein_coding MGP_129S1SvImJ_T0077459.1 MGP_129S1SvImJ_G0030720.1 mouse_genomes_project 6 48059095 48071821 + MGP_129S1SvImJ_P0077459 Malsu1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077460.1 MGP_129S1SvImJ_G0030720.1 mouse_genomes_project 6 48059139 48065199 + Malsu1 protein_coding processed_transcript MGP_129S1SvImJ_T0077461.1 MGP_129S1SvImJ_G0030720.1 mouse_genomes_project 6 48059321 48068604 + Malsu1 protein_coding processed_transcript MGP_129S1SvImJ_T0077462.1 MGP_129S1SvImJ_G0030720.1 mouse_genomes_project 6 48067654 48069748 + Malsu1 protein_coding retained_intron MGP_129S1SvImJ_T0102603.1 MGP_129S1SvImJ_G0040436.1 mouse_genomes_project 6 41278998 41279062 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0008696.1 MGP_129S1SvImJ_G0007029.1 mouse_genomes_project 6 101905271 101930233 - Gm44442 lincRNA lincRNA MGP_129S1SvImJ_T0008697.1 MGP_129S1SvImJ_G0007029.1 mouse_genomes_project 6 101905272 101909463 - Gm44442 lincRNA lincRNA MGP_129S1SvImJ_T0080495.1 MGP_129S1SvImJ_G0031367.1 mouse_genomes_project 6 135229384 135244808 - MGP_129S1SvImJ_P0080495 Styk1 protein_coding protein_coding MGP_129S1SvImJ_T0080496.1 MGP_129S1SvImJ_G0031367.1 mouse_genomes_project 6 135230375 135247410 - MGP_129S1SvImJ_P0080496 Styk1 protein_coding protein_coding MGP_129S1SvImJ_T0080497.1 MGP_129S1SvImJ_G0031367.1 mouse_genomes_project 6 135242172 135285892 - Styk1 protein_coding processed_transcript MGP_129S1SvImJ_T0080498.1 MGP_129S1SvImJ_G0031367.1 mouse_genomes_project 6 135269993 135285889 - Styk1 protein_coding processed_transcript MGP_129S1SvImJ_T0080499.1 MGP_129S1SvImJ_G0031367.1 mouse_genomes_project 6 135284271 135285892 - Styk1 protein_coding retained_intron MGP_129S1SvImJ_T0080160.1 MGP_129S1SvImJ_G0031283.1 mouse_genomes_project 6 128375169 128379673 + MGP_129S1SvImJ_P0080160 Acrbp protein_coding protein_coding MGP_129S1SvImJ_T0080161.1 MGP_129S1SvImJ_G0031283.1 mouse_genomes_project 6 128375427 128376976 + MGP_129S1SvImJ_P0080161 Acrbp protein_coding protein_coding MGP_129S1SvImJ_T0080162.1 MGP_129S1SvImJ_G0031283.1 mouse_genomes_project 6 128375439 128388727 + MGP_129S1SvImJ_P0080162 Acrbp protein_coding protein_coding MGP_129S1SvImJ_T0080163.1 MGP_129S1SvImJ_G0031283.1 mouse_genomes_project 6 128375447 128377026 + MGP_129S1SvImJ_P0080163 Acrbp protein_coding protein_coding MGP_129S1SvImJ_T0080164.1 MGP_129S1SvImJ_G0031283.1 mouse_genomes_project 6 128377332 128379672 + Acrbp protein_coding processed_transcript MGP_129S1SvImJ_T0080165.1 MGP_129S1SvImJ_G0031283.1 mouse_genomes_project 6 128379280 128380695 + Acrbp protein_coding retained_intron MGP_129S1SvImJ_T0080166.1 MGP_129S1SvImJ_G0031283.1 mouse_genomes_project 6 128387648 128388702 + Acrbp protein_coding retained_intron MGP_129S1SvImJ_T0078789.1 MGP_129S1SvImJ_G0031016.1 mouse_genomes_project 6 90297170 90314105 - MGP_129S1SvImJ_P0078789 Mcm2 protein_coding protein_coding MGP_129S1SvImJ_T0078790.1 MGP_129S1SvImJ_G0031016.1 mouse_genomes_project 6 90302117 90305611 - Mcm2 protein_coding retained_intron MGP_129S1SvImJ_T0078791.1 MGP_129S1SvImJ_G0031016.1 mouse_genomes_project 6 90303577 90306881 - MGP_129S1SvImJ_P0078791 Mcm2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078792.1 MGP_129S1SvImJ_G0031016.1 mouse_genomes_project 6 90306737 90314026 - Mcm2 protein_coding processed_transcript MGP_129S1SvImJ_T0078793.1 MGP_129S1SvImJ_G0031016.1 mouse_genomes_project 6 90306848 90314013 - MGP_129S1SvImJ_P0078793 Mcm2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078794.1 MGP_129S1SvImJ_G0031016.1 mouse_genomes_project 6 90306864 90307423 - Mcm2 protein_coding retained_intron MGP_129S1SvImJ_T0078795.1 MGP_129S1SvImJ_G0031016.1 mouse_genomes_project 6 90312272 90314002 - Mcm2 protein_coding retained_intron MGP_129S1SvImJ_T0080805.1 MGP_129S1SvImJ_G0031452.1 mouse_genomes_project 6 146283496 146330157 + MGP_129S1SvImJ_P0080805 Slco1c1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080806.1 MGP_129S1SvImJ_G0031452.1 mouse_genomes_project 6 146283514 146330173 + MGP_129S1SvImJ_P0080806 Slco1c1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080807.1 MGP_129S1SvImJ_G0031452.1 mouse_genomes_project 6 146283663 146330566 + MGP_129S1SvImJ_P0080807 Slco1c1 protein_coding protein_coding MGP_129S1SvImJ_T0080808.1 MGP_129S1SvImJ_G0031452.1 mouse_genomes_project 6 146291698 146329981 + MGP_129S1SvImJ_P0080808 Slco1c1 protein_coding protein_coding MGP_129S1SvImJ_T0080809.1 MGP_129S1SvImJ_G0031452.1 mouse_genomes_project 6 146306413 146308713 + Slco1c1 protein_coding retained_intron MGP_129S1SvImJ_T0079076.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100843605 101201238 - MGP_129S1SvImJ_P0079076 Foxp1 protein_coding protein_coding MGP_129S1SvImJ_T0079077.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100843609 101380252 - MGP_129S1SvImJ_P0079077 Foxp1 protein_coding protein_coding MGP_129S1SvImJ_T0079078.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100843682 100848053 - Foxp1 protein_coding processed_transcript MGP_129S1SvImJ_T0079079.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100847456 101469722 - MGP_129S1SvImJ_P0079079 Foxp1 protein_coding protein_coding MGP_129S1SvImJ_T0079080.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100848357 101093172 - MGP_129S1SvImJ_P0079080 Foxp1 protein_coding protein_coding MGP_129S1SvImJ_T0079081.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100848357 100946434 - MGP_129S1SvImJ_P0079081 Foxp1 protein_coding protein_coding MGP_129S1SvImJ_T0079082.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100848357 101093172 - MGP_129S1SvImJ_P0079082 Foxp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079083.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100848357 101093172 - MGP_129S1SvImJ_P0079083 Foxp1 protein_coding protein_coding MGP_129S1SvImJ_T0079084.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100848357 101093172 - MGP_129S1SvImJ_P0079084 Foxp1 protein_coding protein_coding MGP_129S1SvImJ_T0079085.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100848357 101093172 - MGP_129S1SvImJ_P0079085 Foxp1 protein_coding protein_coding MGP_129S1SvImJ_T0079086.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100848357 101380252 - MGP_129S1SvImJ_P0079086 Foxp1 protein_coding protein_coding MGP_129S1SvImJ_T0079087.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100848357 101093172 - MGP_129S1SvImJ_P0079087 Foxp1 protein_coding protein_coding MGP_129S1SvImJ_T0079088.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100848357 101380252 - MGP_129S1SvImJ_P0079088 Foxp1 protein_coding protein_coding MGP_129S1SvImJ_T0079089.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100848357 101093172 - MGP_129S1SvImJ_P0079089 Foxp1 protein_coding protein_coding MGP_129S1SvImJ_T0079090.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100848438 100853813 - Foxp1 protein_coding retained_intron MGP_129S1SvImJ_T0079091.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100863801 100946488 - MGP_129S1SvImJ_P0079091 Foxp1 protein_coding protein_coding MGP_129S1SvImJ_T0079092.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100870468 100921930 - Foxp1 protein_coding retained_intron MGP_129S1SvImJ_T0079093.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100921449 100947117 - MGP_129S1SvImJ_P0079093 Foxp1 protein_coding protein_coding MGP_129S1SvImJ_T0079094.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100921642 100963144 - MGP_129S1SvImJ_P0079094 Foxp1 protein_coding protein_coding MGP_129S1SvImJ_T0079095.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100924934 100946441 - Foxp1 protein_coding processed_transcript MGP_129S1SvImJ_T0079096.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100928182 101021781 - MGP_129S1SvImJ_P0079096 Foxp1 protein_coding protein_coding MGP_129S1SvImJ_T0079097.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100928193 100963127 - MGP_129S1SvImJ_P0079097 Foxp1 protein_coding protein_coding MGP_129S1SvImJ_T0079098.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100934797 100946166 - MGP_129S1SvImJ_P0079098 Foxp1 protein_coding protein_coding MGP_129S1SvImJ_T0079099.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 100998290 101183074 - MGP_129S1SvImJ_P0079099 Foxp1 protein_coding protein_coding MGP_129S1SvImJ_T0079100.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 101081843 101201238 - Foxp1 protein_coding processed_transcript MGP_129S1SvImJ_T0079101.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 101092093 101201255 - Foxp1 protein_coding retained_intron MGP_129S1SvImJ_T0079102.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 101092093 101201255 - Foxp1 protein_coding retained_intron MGP_129S1SvImJ_T0079103.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 101093082 101469887 - MGP_129S1SvImJ_P0079103 Foxp1 protein_coding protein_coding MGP_129S1SvImJ_T0079105.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 101195091 101471386 - Foxp1 protein_coding processed_transcript MGP_129S1SvImJ_T0079106.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 101243003 101381102 - Foxp1 protein_coding processed_transcript MGP_129S1SvImJ_T0079109.1 MGP_129S1SvImJ_G0031080.1 mouse_genomes_project 6 101380142 101471460 - Foxp1 protein_coding processed_transcript MGP_129S1SvImJ_T0077261.1 MGP_129S1SvImJ_G0030671.1 mouse_genomes_project 6 41762494 41767163 + MGP_129S1SvImJ_P0077261 Olfr437 protein_coding protein_coding MGP_129S1SvImJ_T0077262.1 MGP_129S1SvImJ_G0030671.1 mouse_genomes_project 6 41766145 41767163 + MGP_129S1SvImJ_P0077262 Olfr437 protein_coding protein_coding MGP_129S1SvImJ_T0076991.1 MGP_129S1SvImJ_G0030584.1 mouse_genomes_project 6 36598022 36655037 - MGP_129S1SvImJ_P0076991 Zc3hav1 protein_coding protein_coding MGP_129S1SvImJ_T0076992.1 MGP_129S1SvImJ_G0030584.1 mouse_genomes_project 6 36603162 36655037 - MGP_129S1SvImJ_P0076992 Zc3hav1 protein_coding protein_coding MGP_129S1SvImJ_T0076993.1 MGP_129S1SvImJ_G0030584.1 mouse_genomes_project 6 36608243 36655367 - MGP_129S1SvImJ_P0076993 Zc3hav1 protein_coding protein_coding MGP_129S1SvImJ_T0076994.1 MGP_129S1SvImJ_G0030584.1 mouse_genomes_project 6 36608243 36655367 - MGP_129S1SvImJ_P0076994 Zc3hav1 protein_coding protein_coding MGP_129S1SvImJ_T0080513.1 MGP_129S1SvImJ_G0031377.1 mouse_genomes_project 6 136533639 136541522 - MGP_129S1SvImJ_P0080513 Prpmp5 protein_coding protein_coding MGP_129S1SvImJ_T0099986.1 MGP_129S1SvImJ_G0038053.1 mouse_genomes_project 6 24105205 24105345 - Gm24691 snRNA snRNA MGP_129S1SvImJ_T0001995.1 MGP_129S1SvImJ_G0001908.1 mouse_genomes_project 6 44808050 44813770 + TEC TEC MGP_129S1SvImJ_T0100004.1 MGP_129S1SvImJ_G0038071.1 mouse_genomes_project 6 66993947 66994081 + Gm25260 snRNA snRNA MGP_129S1SvImJ_T0002091.1 MGP_129S1SvImJ_G0002004.1 mouse_genomes_project 6 89918138 89919133 + TEC TEC MGP_129S1SvImJ_T0076483.1 MGP_129S1SvImJ_G0030487.1 mouse_genomes_project 6 20782102 20785385 - MGP_129S1SvImJ_P0076483 Fezf1 protein_coding protein_coding MGP_129S1SvImJ_T0077684.1 MGP_129S1SvImJ_G0030770.1 mouse_genomes_project 6 54571195 54575643 - MGP_129S1SvImJ_P0077684 Inmt protein_coding protein_coding MGP_129S1SvImJ_T0077685.1 MGP_129S1SvImJ_G0030770.1 mouse_genomes_project 6 54573357 54575614 - Inmt protein_coding retained_intron MGP_129S1SvImJ_T0079905.1 MGP_129S1SvImJ_G0031227.1 mouse_genomes_project 6 125597288 125606811 + MGP_129S1SvImJ_P0079905 Mfap5 protein_coding protein_coding MGP_129S1SvImJ_T0079906.1 MGP_129S1SvImJ_G0031227.1 mouse_genomes_project 6 125605018 125619950 + MGP_129S1SvImJ_P0079906 Mfap5 protein_coding protein_coding MGP_129S1SvImJ_T0079907.1 MGP_129S1SvImJ_G0031227.1 mouse_genomes_project 6 125605094 125619816 + MGP_129S1SvImJ_P0079907 Mfap5 protein_coding protein_coding MGP_129S1SvImJ_T0079908.1 MGP_129S1SvImJ_G0031227.1 mouse_genomes_project 6 125605111 125619522 + MGP_129S1SvImJ_P0079908 Mfap5 protein_coding protein_coding MGP_129S1SvImJ_T0079909.1 MGP_129S1SvImJ_G0031227.1 mouse_genomes_project 6 125605148 125619615 + MGP_129S1SvImJ_P0079909 Mfap5 protein_coding protein_coding MGP_129S1SvImJ_T0079910.1 MGP_129S1SvImJ_G0031227.1 mouse_genomes_project 6 125613691 125619819 + Mfap5 protein_coding retained_intron MGP_129S1SvImJ_T0011665.1 MGP_129S1SvImJ_G0009781.1 mouse_genomes_project 6 51488433 51488620 + Gm27492 misc_RNA misc_RNA MGP_129S1SvImJ_T0008767.1 MGP_129S1SvImJ_G0007083.1 mouse_genomes_project 6 140093465 140104864 + Gm14329 lincRNA lincRNA MGP_129S1SvImJ_T0079865.1 MGP_129S1SvImJ_G0031218.1 mouse_genomes_project 6 124320082 124423229 - MGP_129S1SvImJ_P0079865 Iqsec3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079866.1 MGP_129S1SvImJ_G0031218.1 mouse_genomes_project 6 124320082 124423187 - MGP_129S1SvImJ_P0079866 Iqsec3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079867.1 MGP_129S1SvImJ_G0031218.1 mouse_genomes_project 6 124320082 124423242 - MGP_129S1SvImJ_P0079867 Iqsec3 protein_coding protein_coding MGP_129S1SvImJ_T0079868.1 MGP_129S1SvImJ_G0031218.1 mouse_genomes_project 6 124350925 124423242 - MGP_129S1SvImJ_P0079868 Iqsec3 protein_coding protein_coding MGP_129S1SvImJ_T0008634.1 MGP_129S1SvImJ_G0006981.1 mouse_genomes_project 6 71133216 71154589 + Gm43291 lincRNA lincRNA MGP_129S1SvImJ_T0076530.1 MGP_129S1SvImJ_G0030504.1 mouse_genomes_project 6 23343833 23413875 - MGP_129S1SvImJ_P0076530 Pot1a protein_coding protein_coding MGP_129S1SvImJ_T0076531.1 MGP_129S1SvImJ_G0030504.1 mouse_genomes_project 6 23344597 23346293 - Pot1a protein_coding retained_intron MGP_129S1SvImJ_T0076532.1 MGP_129S1SvImJ_G0030504.1 mouse_genomes_project 6 23344677 23401179 - MGP_129S1SvImJ_P0076532 Pot1a protein_coding protein_coding MGP_129S1SvImJ_T0076533.1 MGP_129S1SvImJ_G0030504.1 mouse_genomes_project 6 23350243 23413875 - Pot1a protein_coding retained_intron MGP_129S1SvImJ_T0076534.1 MGP_129S1SvImJ_G0030504.1 mouse_genomes_project 6 23359149 23413844 - MGP_129S1SvImJ_P0076534 Pot1a protein_coding protein_coding MGP_129S1SvImJ_T0076535.1 MGP_129S1SvImJ_G0030504.1 mouse_genomes_project 6 23377148 23413871 - Pot1a protein_coding processed_transcript MGP_129S1SvImJ_T0076536.1 MGP_129S1SvImJ_G0030504.1 mouse_genomes_project 6 23393389 23413895 - Pot1a protein_coding retained_intron MGP_129S1SvImJ_T0076537.1 MGP_129S1SvImJ_G0030504.1 mouse_genomes_project 6 23401697 23413865 - Pot1a protein_coding retained_intron MGP_129S1SvImJ_T0076538.1 MGP_129S1SvImJ_G0030504.1 mouse_genomes_project 6 23403487 23404560 - Pot1a protein_coding processed_transcript MGP_129S1SvImJ_T0002205.1 MGP_129S1SvImJ_G0002117.1 mouse_genomes_project 6 151785387 151786631 + TEC TEC MGP_129S1SvImJ_T0002593.1 MGP_129S1SvImJ_G0002494.1 mouse_genomes_project 6 40051816 40051867 + MGP_129S1SvImJ_P0002593 Trbj2-2 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0005140.1 MGP_129S1SvImJ_G0004388.1 mouse_genomes_project 6 149617006 149639204 + Sox5os3 antisense antisense MGP_129S1SvImJ_T0005141.1 MGP_129S1SvImJ_G0004388.1 mouse_genomes_project 6 149625061 149638954 + Sox5os3 antisense antisense MGP_129S1SvImJ_T0008663.1 MGP_129S1SvImJ_G0007005.1 mouse_genomes_project 6 87771190 87777555 - 2310040G24Rik lincRNA lincRNA MGP_129S1SvImJ_T0008664.1 MGP_129S1SvImJ_G0007005.1 mouse_genomes_project 6 87771190 87777578 - 2310040G24Rik lincRNA lincRNA MGP_129S1SvImJ_T0008774.1 MGP_129S1SvImJ_G0007089.1 mouse_genomes_project 6 147812501 147812888 + 4930434O05Rik lincRNA lincRNA MGP_129S1SvImJ_T0005103.1 MGP_129S1SvImJ_G0004357.1 mouse_genomes_project 6 128326795 128375332 - Gm43989 antisense antisense MGP_129S1SvImJ_T0015682.1 MGP_129S1SvImJ_G0013771.1 mouse_genomes_project 6 152216287 152217782 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101277.1 MGP_129S1SvImJ_G0039344.1 mouse_genomes_project 6 119451817 119451941 - Gm22882 snoRNA snoRNA MGP_129S1SvImJ_T0015567.1 MGP_129S1SvImJ_G0013656.1 mouse_genomes_project 6 116732041 116732681 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077619.1 MGP_129S1SvImJ_G0030758.1 mouse_genomes_project 6 53376980 53405190 + Chn2 protein_coding processed_transcript MGP_129S1SvImJ_T0077620.1 MGP_129S1SvImJ_G0030758.1 mouse_genomes_project 6 53376999 53646845 + MGP_129S1SvImJ_P0077620 Chn2 protein_coding protein_coding MGP_129S1SvImJ_T0077621.1 MGP_129S1SvImJ_G0030758.1 mouse_genomes_project 6 53377039 53566279 + MGP_129S1SvImJ_P0077621 Chn2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077622.1 MGP_129S1SvImJ_G0030758.1 mouse_genomes_project 6 53377465 53568243 + Chn2 protein_coding processed_transcript MGP_129S1SvImJ_T0077623.1 MGP_129S1SvImJ_G0030758.1 mouse_genomes_project 6 53377512 53540624 + MGP_129S1SvImJ_P0077623 Chn2 protein_coding protein_coding MGP_129S1SvImJ_T0077624.1 MGP_129S1SvImJ_G0030758.1 mouse_genomes_project 6 53435105 53566246 + Chn2 protein_coding processed_transcript MGP_129S1SvImJ_T0077625.1 MGP_129S1SvImJ_G0030758.1 mouse_genomes_project 6 53610432 53646417 + MGP_129S1SvImJ_P0077625 Chn2 protein_coding protein_coding MGP_129S1SvImJ_T0077626.1 MGP_129S1SvImJ_G0030758.1 mouse_genomes_project 6 53612689 53646209 + MGP_129S1SvImJ_P0077626 Chn2 protein_coding protein_coding MGP_129S1SvImJ_T0077627.1 MGP_129S1SvImJ_G0030758.1 mouse_genomes_project 6 53614708 53646515 + MGP_129S1SvImJ_P0077627 Chn2 protein_coding protein_coding MGP_129S1SvImJ_T0077628.1 MGP_129S1SvImJ_G0030758.1 mouse_genomes_project 6 53618033 53647934 + MGP_129S1SvImJ_P0077628 Chn2 protein_coding protein_coding MGP_129S1SvImJ_T0077629.1 MGP_129S1SvImJ_G0030758.1 mouse_genomes_project 6 53618451 53646368 + MGP_129S1SvImJ_P0077629 Chn2 protein_coding protein_coding MGP_129S1SvImJ_T0077630.1 MGP_129S1SvImJ_G0030758.1 mouse_genomes_project 6 53618451 53646368 + MGP_129S1SvImJ_P0077630 Chn2 protein_coding protein_coding MGP_129S1SvImJ_T0077631.1 MGP_129S1SvImJ_G0030758.1 mouse_genomes_project 6 53618451 53646368 + MGP_129S1SvImJ_P0077631 Chn2 protein_coding protein_coding MGP_129S1SvImJ_T0077632.1 MGP_129S1SvImJ_G0030758.1 mouse_genomes_project 6 53618451 53646368 + MGP_129S1SvImJ_P0077632 Chn2 protein_coding protein_coding MGP_129S1SvImJ_T0077633.1 MGP_129S1SvImJ_G0030758.1 mouse_genomes_project 6 53618451 53646368 + MGP_129S1SvImJ_P0077633 Chn2 protein_coding protein_coding MGP_129S1SvImJ_T0000196.1 MGP_129S1SvImJ_G0000151.1 mouse_genomes_project 6 70006795 70007273 - MGP_129S1SvImJ_P0000196 Igkv4-57-1 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0002160.1 MGP_129S1SvImJ_G0002072.1 mouse_genomes_project 6 127636742 127638732 - TEC TEC MGP_129S1SvImJ_T0011642.1 MGP_129S1SvImJ_G0009758.1 mouse_genomes_project 6 7826382 7826474 + Gm27894 misc_RNA misc_RNA MGP_129S1SvImJ_T0079456.1 MGP_129S1SvImJ_G0031146.1 mouse_genomes_project 6 117839277 117871476 + MGP_129S1SvImJ_P0079456 Gm17482 protein_coding protein_coding MGP_129S1SvImJ_T0000160.1 MGP_129S1SvImJ_G0000123.1 mouse_genomes_project 6 68415663 68416389 + MGP_129S1SvImJ_P0000160 Igkv2-112 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000161.1 MGP_129S1SvImJ_G0000123.1 mouse_genomes_project 6 68415663 68416389 + MGP_129S1SvImJ_P0000161 Igkv2-112 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0079943.1 MGP_129S1SvImJ_G0031237.1 mouse_genomes_project 6 126077099 126089190 + MGP_129S1SvImJ_P0079943 Clec4a3 protein_coding protein_coding MGP_129S1SvImJ_T0079944.1 MGP_129S1SvImJ_G0031237.1 mouse_genomes_project 6 126077228 126089189 + MGP_129S1SvImJ_P0079944 Clec4a3 protein_coding protein_coding MGP_129S1SvImJ_T0079945.1 MGP_129S1SvImJ_G0031237.1 mouse_genomes_project 6 126077362 126085933 + MGP_129S1SvImJ_P0079945 Clec4a3 protein_coding protein_coding MGP_129S1SvImJ_T0010826.1 MGP_129S1SvImJ_G0008942.1 mouse_genomes_project 6 128021460 128021532 - Mir141 miRNA miRNA MGP_129S1SvImJ_T0008659.1 MGP_129S1SvImJ_G0007001.1 mouse_genomes_project 6 85313875 85382869 + Gm44127 lincRNA lincRNA MGP_129S1SvImJ_T0098989.1 MGP_129S1SvImJ_G0037063.1 mouse_genomes_project 6 116143789 116147842 + Gm44200 sense_intronic sense_intronic MGP_129S1SvImJ_T0077468.1 MGP_129S1SvImJ_G0030722.1 mouse_genomes_project 6 48244280 48264295 - MGP_129S1SvImJ_P0077468 Tra2a protein_coding protein_coding MGP_129S1SvImJ_T0077469.1 MGP_129S1SvImJ_G0030722.1 mouse_genomes_project 6 48244280 48264296 - MGP_129S1SvImJ_P0077469 Tra2a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077470.1 MGP_129S1SvImJ_G0030722.1 mouse_genomes_project 6 48244284 48264318 - Tra2a protein_coding retained_intron MGP_129S1SvImJ_T0077471.1 MGP_129S1SvImJ_G0030722.1 mouse_genomes_project 6 48244284 48264315 - MGP_129S1SvImJ_P0077471 Tra2a protein_coding protein_coding MGP_129S1SvImJ_T0077472.1 MGP_129S1SvImJ_G0030722.1 mouse_genomes_project 6 48260527 48264315 - Tra2a protein_coding retained_intron MGP_129S1SvImJ_T0015467.1 MGP_129S1SvImJ_G0013556.1 mouse_genomes_project 6 76055496 76056465 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079698.1 MGP_129S1SvImJ_G0031192.1 mouse_genomes_project 6 122103005 122118655 - MGP_129S1SvImJ_P0079698 Lrtm2 protein_coding protein_coding MGP_129S1SvImJ_T0079699.1 MGP_129S1SvImJ_G0031192.1 mouse_genomes_project 6 122103005 122117094 - MGP_129S1SvImJ_P0079699 Lrtm2 protein_coding protein_coding MGP_129S1SvImJ_T0079700.1 MGP_129S1SvImJ_G0031192.1 mouse_genomes_project 6 122103005 122118646 - MGP_129S1SvImJ_P0079700 Lrtm2 protein_coding protein_coding MGP_129S1SvImJ_T0079701.1 MGP_129S1SvImJ_G0031192.1 mouse_genomes_project 6 122111536 122117094 - MGP_129S1SvImJ_P0079701 Lrtm2 protein_coding protein_coding MGP_129S1SvImJ_T0015525.1 MGP_129S1SvImJ_G0013614.1 mouse_genomes_project 6 99757104 99757356 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015466.1 MGP_129S1SvImJ_G0013555.1 mouse_genomes_project 6 75901891 75902874 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002049.1 MGP_129S1SvImJ_G0001962.1 mouse_genomes_project 6 78555917 78559955 - TEC TEC MGP_129S1SvImJ_T0077162.1 MGP_129S1SvImJ_G0030634.1 mouse_genomes_project 6 40203361 40221887 - MGP_129S1SvImJ_P0077162 Kel protein_coding protein_coding MGP_129S1SvImJ_T0077163.1 MGP_129S1SvImJ_G0030634.1 mouse_genomes_project 6 40203366 40205028 - MGP_129S1SvImJ_P0077163 Kel protein_coding protein_coding MGP_129S1SvImJ_T0077164.1 MGP_129S1SvImJ_G0030634.1 mouse_genomes_project 6 40203385 40204887 - Kel protein_coding processed_transcript MGP_129S1SvImJ_T0077165.1 MGP_129S1SvImJ_G0030634.1 mouse_genomes_project 6 40205054 40216716 - MGP_129S1SvImJ_P0077165 Kel protein_coding protein_coding MGP_129S1SvImJ_T0077166.1 MGP_129S1SvImJ_G0030634.1 mouse_genomes_project 6 40205469 40205995 - Kel protein_coding retained_intron MGP_129S1SvImJ_T0015690.1 MGP_129S1SvImJ_G0013779.1 mouse_genomes_project 6 154487995 154488440 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077220.1 MGP_129S1SvImJ_G0030649.1 mouse_genomes_project 6 40875063 40890804 - MGP_129S1SvImJ_P0077220 Epha1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0077221.1 MGP_129S1SvImJ_G0030649.1 mouse_genomes_project 6 40875071 40890862 - MGP_129S1SvImJ_P0077221 Epha1 protein_coding protein_coding MGP_129S1SvImJ_T0077222.1 MGP_129S1SvImJ_G0030649.1 mouse_genomes_project 6 40875300 40890862 - MGP_129S1SvImJ_P0077222 Epha1 protein_coding protein_coding MGP_129S1SvImJ_T0077223.1 MGP_129S1SvImJ_G0030649.1 mouse_genomes_project 6 40883602 40890829 - Epha1 protein_coding retained_intron MGP_129S1SvImJ_T0004922.1 MGP_129S1SvImJ_G0004231.1 mouse_genomes_project 6 5286512 5296340 - Gm16055 antisense antisense MGP_129S1SvImJ_T0008746.1 MGP_129S1SvImJ_G0007072.1 mouse_genomes_project 6 132497008 132497622 - Gm44066 lincRNA lincRNA MGP_129S1SvImJ_T0101752.1 MGP_129S1SvImJ_G0039741.1 mouse_genomes_project 6 102259675 102260707 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101753.1 MGP_129S1SvImJ_G0039741.1 mouse_genomes_project 6 102260578 102262792 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0001934.1 MGP_129S1SvImJ_G0001847.1 mouse_genomes_project 6 1746351 1750500 + TEC TEC MGP_129S1SvImJ_T0000340.1 MGP_129S1SvImJ_G0000282.1 mouse_genomes_project 6 70226680 70227150 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0080529.1 MGP_129S1SvImJ_G0031391.1 mouse_genomes_project 6 137032075 137033077 + MGP_129S1SvImJ_P0080529 Tas2r110 protein_coding protein_coding MGP_129S1SvImJ_T0079800.1 MGP_129S1SvImJ_G0031207.1 mouse_genomes_project 6 123573939 123634315 + Cecr2 protein_coding retained_intron MGP_129S1SvImJ_T0079801.1 MGP_129S1SvImJ_G0031207.1 mouse_genomes_project 6 123573991 123683424 + MGP_129S1SvImJ_P0079801 Cecr2 protein_coding protein_coding MGP_129S1SvImJ_T0079802.1 MGP_129S1SvImJ_G0031207.1 mouse_genomes_project 6 123574105 123634143 + Cecr2 protein_coding processed_transcript MGP_129S1SvImJ_T0079803.1 MGP_129S1SvImJ_G0031207.1 mouse_genomes_project 6 123574152 123679140 + MGP_129S1SvImJ_P0079803 Cecr2 protein_coding protein_coding MGP_129S1SvImJ_T0079804.1 MGP_129S1SvImJ_G0031207.1 mouse_genomes_project 6 123643904 123667119 + Cecr2 protein_coding processed_transcript MGP_129S1SvImJ_T0079805.1 MGP_129S1SvImJ_G0031207.1 mouse_genomes_project 6 123643971 123665994 + MGP_129S1SvImJ_P0079805 Cecr2 protein_coding protein_coding MGP_129S1SvImJ_T0079806.1 MGP_129S1SvImJ_G0031207.1 mouse_genomes_project 6 123645101 123650451 + Cecr2 protein_coding retained_intron MGP_129S1SvImJ_T0079807.1 MGP_129S1SvImJ_G0031207.1 mouse_genomes_project 6 123668578 123673951 + MGP_129S1SvImJ_P0079807 Cecr2 protein_coding protein_coding MGP_129S1SvImJ_T0078834.1 MGP_129S1SvImJ_G0031022.1 mouse_genomes_project 6 91163486 91164419 + MGP_129S1SvImJ_P0078834 Vmn1r40 protein_coding protein_coding MGP_129S1SvImJ_T0008552.1 MGP_129S1SvImJ_G0006924.1 mouse_genomes_project 6 29280327 29318525 - Mkln1os lincRNA lincRNA MGP_129S1SvImJ_T0008554.1 MGP_129S1SvImJ_G0006924.1 mouse_genomes_project 6 29296453 29318505 - Mkln1os lincRNA lincRNA MGP_129S1SvImJ_T0008555.1 MGP_129S1SvImJ_G0006924.1 mouse_genomes_project 6 29298090 29318511 - Mkln1os lincRNA lincRNA MGP_129S1SvImJ_T0004938.1 MGP_129S1SvImJ_G0004241.1 mouse_genomes_project 6 27306851 27308825 + Gm26627 antisense antisense MGP_129S1SvImJ_T0005094.1 MGP_129S1SvImJ_G0004348.1 mouse_genomes_project 6 123874374 123875340 + Gm43916 antisense antisense MGP_129S1SvImJ_T0076456.1 MGP_129S1SvImJ_G0030482.1 mouse_genomes_project 6 19457745 19757545 + MGP_129S1SvImJ_P0076456 Cped1 protein_coding protein_coding MGP_129S1SvImJ_T0076457.1 MGP_129S1SvImJ_G0030482.1 mouse_genomes_project 6 19457773 19485552 + Cped1 protein_coding processed_transcript MGP_129S1SvImJ_T0076458.1 MGP_129S1SvImJ_G0030482.1 mouse_genomes_project 6 19457773 19616811 + MGP_129S1SvImJ_P0076458 Cped1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076459.1 MGP_129S1SvImJ_G0030482.1 mouse_genomes_project 6 19458425 19615838 + MGP_129S1SvImJ_P0076459 Cped1 protein_coding protein_coding MGP_129S1SvImJ_T0076460.1 MGP_129S1SvImJ_G0030482.1 mouse_genomes_project 6 19458721 19551589 + Cped1 protein_coding processed_transcript MGP_129S1SvImJ_T0076461.1 MGP_129S1SvImJ_G0030482.1 mouse_genomes_project 6 19492901 19739969 + MGP_129S1SvImJ_P0076461 Cped1 protein_coding protein_coding MGP_129S1SvImJ_T0076462.1 MGP_129S1SvImJ_G0030482.1 mouse_genomes_project 6 19501806 19568120 + Cped1 protein_coding processed_transcript MGP_129S1SvImJ_T0076463.1 MGP_129S1SvImJ_G0030482.1 mouse_genomes_project 6 19621419 19636629 + Cped1 protein_coding retained_intron MGP_129S1SvImJ_T0000303.1 MGP_129S1SvImJ_G0000245.1 mouse_genomes_project 6 68245533 68245993 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0077224.1 MGP_129S1SvImJ_G0030650.1 mouse_genomes_project 6 40917821 40918703 + MGP_129S1SvImJ_P0077224 Tas2r143 protein_coding protein_coding MGP_129S1SvImJ_T0100023.1 MGP_129S1SvImJ_G0038090.1 mouse_genomes_project 6 123269637 123269743 - Gm24592 snRNA snRNA MGP_129S1SvImJ_T0078915.1 MGP_129S1SvImJ_G0031045.1 mouse_genomes_project 6 92955418 93003194 - MGP_129S1SvImJ_P0078915 Wnt7a protein_coding protein_coding MGP_129S1SvImJ_T0078916.1 MGP_129S1SvImJ_G0031045.1 mouse_genomes_project 6 92955420 92956535 - Wnt7a protein_coding processed_transcript MGP_129S1SvImJ_T0078917.1 MGP_129S1SvImJ_G0031045.1 mouse_genomes_project 6 92955422 92956509 - Wnt7a protein_coding processed_transcript MGP_129S1SvImJ_T0000050.1 MGP_129S1SvImJ_G0000041.1 mouse_genomes_project 6 71138028 71138070 + Igkj5 IG_J_gene processed_transcript MGP_129S1SvImJ_T0000051.1 MGP_129S1SvImJ_G0000041.1 mouse_genomes_project 6 71138028 71138066 + MGP_129S1SvImJ_P0000051 Igkj5 IG_J_gene IG_J_gene MGP_129S1SvImJ_T0077950.1 MGP_129S1SvImJ_G0030854.1 mouse_genomes_project 6 71673683 71728195 - MGP_129S1SvImJ_P0077950 Smyd1 protein_coding protein_coding MGP_129S1SvImJ_T0077951.1 MGP_129S1SvImJ_G0030854.1 mouse_genomes_project 6 71673685 71728167 - MGP_129S1SvImJ_P0077951 Smyd1 protein_coding protein_coding MGP_129S1SvImJ_T0077952.1 MGP_129S1SvImJ_G0030854.1 mouse_genomes_project 6 71675080 71791705 - MGP_129S1SvImJ_P0077952 Smyd1 protein_coding protein_coding MGP_129S1SvImJ_T0077953.1 MGP_129S1SvImJ_G0030854.1 mouse_genomes_project 6 71675238 71676613 - MGP_129S1SvImJ_P0077953 Smyd1 protein_coding protein_coding MGP_129S1SvImJ_T0077954.1 MGP_129S1SvImJ_G0030854.1 mouse_genomes_project 6 71725520 71728146 - MGP_129S1SvImJ_P0077954 Smyd1 protein_coding protein_coding MGP_129S1SvImJ_T0077959.1 MGP_129S1SvImJ_G0030854.1 mouse_genomes_project 6 71777827 71791678 - MGP_129S1SvImJ_P0077959 Smyd1 protein_coding protein_coding MGP_129S1SvImJ_T0081109.1 MGP_129S1SvImJ_G0031506.1 mouse_genomes_project 6 154031473 154060730 - MGP_129S1SvImJ_P0081109 Fam60a protein_coding protein_coding MGP_129S1SvImJ_T0081110.1 MGP_129S1SvImJ_G0031506.1 mouse_genomes_project 6 154031678 154062335 - MGP_129S1SvImJ_P0081110 Fam60a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081111.1 MGP_129S1SvImJ_G0031506.1 mouse_genomes_project 6 154037961 154060641 - MGP_129S1SvImJ_P0081111 Fam60a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081112.1 MGP_129S1SvImJ_G0031506.1 mouse_genomes_project 6 154037965 154062073 - MGP_129S1SvImJ_P0081112 Fam60a protein_coding protein_coding MGP_129S1SvImJ_T0081113.1 MGP_129S1SvImJ_G0031506.1 mouse_genomes_project 6 154040492 154062281 - MGP_129S1SvImJ_P0081113 Fam60a protein_coding protein_coding MGP_129S1SvImJ_T0081114.1 MGP_129S1SvImJ_G0031506.1 mouse_genomes_project 6 154042702 154062340 - MGP_129S1SvImJ_P0081114 Fam60a protein_coding protein_coding MGP_129S1SvImJ_T0081115.1 MGP_129S1SvImJ_G0031506.1 mouse_genomes_project 6 154044586 154062315 - Fam60a protein_coding retained_intron MGP_129S1SvImJ_T0081116.1 MGP_129S1SvImJ_G0031506.1 mouse_genomes_project 6 154060307 154062368 - Fam60a protein_coding processed_transcript MGP_129S1SvImJ_T0018281.1 MGP_129S1SvImJ_G0015627.1 mouse_genomes_project 6 37921611 37936402 + 8030453O22Rik processed_transcript antisense MGP_129S1SvImJ_T0018282.1 MGP_129S1SvImJ_G0015627.1 mouse_genomes_project 6 37921620 37942056 + 8030453O22Rik processed_transcript antisense MGP_129S1SvImJ_T0018283.1 MGP_129S1SvImJ_G0015627.1 mouse_genomes_project 6 37921624 37922373 + 8030453O22Rik processed_transcript retained_intron MGP_129S1SvImJ_T0102627.1 MGP_129S1SvImJ_G0040460.1 mouse_genomes_project 6 70898116 70898264 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0078672.1 MGP_129S1SvImJ_G0030999.1 mouse_genomes_project 6 89153702 89208423 - MGP_129S1SvImJ_P0078672 Gm45140 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078676.1 MGP_129S1SvImJ_G0030999.1 mouse_genomes_project 6 89157287 89191914 - MGP_129S1SvImJ_P0078676 Gm45140 protein_coding protein_coding MGP_129S1SvImJ_T0001964.1 MGP_129S1SvImJ_G0001877.1 mouse_genomes_project 6 27750506 27754117 - TEC TEC MGP_129S1SvImJ_T0002019.1 MGP_129S1SvImJ_G0001932.1 mouse_genomes_project 6 58612873 58614992 + TEC TEC MGP_129S1SvImJ_T0076126.1 MGP_129S1SvImJ_G0030420.1 mouse_genomes_project 6 183132 221245 - MGP_129S1SvImJ_P0076126 Hepacam2 protein_coding protein_coding MGP_129S1SvImJ_T0076127.1 MGP_129S1SvImJ_G0030420.1 mouse_genomes_project 6 184224 214047 - Hepacam2 protein_coding retained_intron MGP_129S1SvImJ_T0076128.1 MGP_129S1SvImJ_G0030420.1 mouse_genomes_project 6 202709 214061 - MGP_129S1SvImJ_P0076128 Hepacam2 protein_coding protein_coding MGP_129S1SvImJ_T0076129.1 MGP_129S1SvImJ_G0030420.1 mouse_genomes_project 6 209951 224945 - MGP_129S1SvImJ_P0076129 Hepacam2 protein_coding protein_coding MGP_129S1SvImJ_T0076130.1 MGP_129S1SvImJ_G0030420.1 mouse_genomes_project 6 210238 214028 - Hepacam2 protein_coding retained_intron MGP_129S1SvImJ_T0078837.1 MGP_129S1SvImJ_G0031025.1 mouse_genomes_project 6 91370575 91371683 + MGP_129S1SvImJ_P0078837 Vmn1r44 protein_coding protein_coding MGP_129S1SvImJ_T0077227.1 MGP_129S1SvImJ_G0030653.1 mouse_genomes_project 6 40979253 40980195 - MGP_129S1SvImJ_P0077227 Olfr458 protein_coding protein_coding MGP_129S1SvImJ_T0008606.1 MGP_129S1SvImJ_G0006960.1 mouse_genomes_project 6 50580553 50581807 - 0610033M10Rik lincRNA lincRNA MGP_129S1SvImJ_T0008607.1 MGP_129S1SvImJ_G0006960.1 mouse_genomes_project 6 50580792 50581621 - 0610033M10Rik lincRNA lincRNA MGP_129S1SvImJ_T0010802.1 MGP_129S1SvImJ_G0008918.1 mouse_genomes_project 6 87872077 87872139 - Gm22184 miRNA miRNA MGP_129S1SvImJ_T0015621.1 MGP_129S1SvImJ_G0013710.1 mouse_genomes_project 6 130866300 130866833 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079475.1 MGP_129S1SvImJ_G0031151.1 mouse_genomes_project 6 118229769 118253338 + MGP_129S1SvImJ_P0079475 Mkrn2 protein_coding protein_coding MGP_129S1SvImJ_T0079476.1 MGP_129S1SvImJ_G0031151.1 mouse_genomes_project 6 118232731 118244128 + Mkrn2 protein_coding processed_transcript MGP_129S1SvImJ_T0079477.1 MGP_129S1SvImJ_G0031151.1 mouse_genomes_project 6 118242065 118243121 + Mkrn2 protein_coding retained_intron MGP_129S1SvImJ_T0002161.1 MGP_129S1SvImJ_G0002073.1 mouse_genomes_project 6 128021193 128021491 - TEC TEC MGP_129S1SvImJ_T0076165.1 MGP_129S1SvImJ_G0030429.1 mouse_genomes_project 6 1442620 1521582 - MGP_129S1SvImJ_P0076165 Sgce protein_coding protein_coding MGP_129S1SvImJ_T0076166.1 MGP_129S1SvImJ_G0030429.1 mouse_genomes_project 6 1442620 1521610 - MGP_129S1SvImJ_P0076166 Sgce protein_coding protein_coding MGP_129S1SvImJ_T0076167.1 MGP_129S1SvImJ_G0030429.1 mouse_genomes_project 6 1442624 1521613 - MGP_129S1SvImJ_P0076167 Sgce protein_coding protein_coding MGP_129S1SvImJ_T0076168.1 MGP_129S1SvImJ_G0030429.1 mouse_genomes_project 6 1442624 1521563 - MGP_129S1SvImJ_P0076168 Sgce protein_coding protein_coding MGP_129S1SvImJ_T0076169.1 MGP_129S1SvImJ_G0030429.1 mouse_genomes_project 6 1442654 1521522 - MGP_129S1SvImJ_P0076169 Sgce protein_coding protein_coding MGP_129S1SvImJ_T0076170.1 MGP_129S1SvImJ_G0030429.1 mouse_genomes_project 6 1442688 1521594 - MGP_129S1SvImJ_P0076170 Sgce protein_coding protein_coding MGP_129S1SvImJ_T0076171.1 MGP_129S1SvImJ_G0030429.1 mouse_genomes_project 6 1442688 1521530 - MGP_129S1SvImJ_P0076171 Sgce protein_coding protein_coding MGP_129S1SvImJ_T0076172.1 MGP_129S1SvImJ_G0030429.1 mouse_genomes_project 6 1445979 1521563 - Sgce protein_coding retained_intron MGP_129S1SvImJ_T0076173.1 MGP_129S1SvImJ_G0030429.1 mouse_genomes_project 6 1458214 1521486 - Sgce protein_coding retained_intron MGP_129S1SvImJ_T0076174.1 MGP_129S1SvImJ_G0030429.1 mouse_genomes_project 6 1461030 1521476 - Sgce protein_coding processed_transcript MGP_129S1SvImJ_T0076175.1 MGP_129S1SvImJ_G0030429.1 mouse_genomes_project 6 1461202 1521469 - MGP_129S1SvImJ_P0076175 Sgce protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076176.1 MGP_129S1SvImJ_G0030429.1 mouse_genomes_project 6 1477198 1483200 - Sgce protein_coding retained_intron MGP_129S1SvImJ_T0076177.1 MGP_129S1SvImJ_G0030429.1 mouse_genomes_project 6 1510856 1513918 - Sgce protein_coding retained_intron MGP_129S1SvImJ_T0080776.1 MGP_129S1SvImJ_G0031448.1 mouse_genomes_project 6 145140056 145325102 + MGP_129S1SvImJ_P0080776 Plekha5 protein_coding protein_coding MGP_129S1SvImJ_T0080777.1 MGP_129S1SvImJ_G0031448.1 mouse_genomes_project 6 145140162 145316240 + MGP_129S1SvImJ_P0080777 Plekha5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080778.1 MGP_129S1SvImJ_G0031448.1 mouse_genomes_project 6 145140163 145313424 + MGP_129S1SvImJ_P0080778 Plekha5 protein_coding protein_coding MGP_129S1SvImJ_T0080779.1 MGP_129S1SvImJ_G0031448.1 mouse_genomes_project 6 145148991 145276168 + MGP_129S1SvImJ_P0080779 Plekha5 protein_coding protein_coding MGP_129S1SvImJ_T0080780.1 MGP_129S1SvImJ_G0031448.1 mouse_genomes_project 6 145238016 145276169 + MGP_129S1SvImJ_P0080780 Plekha5 protein_coding protein_coding MGP_129S1SvImJ_T0080781.1 MGP_129S1SvImJ_G0031448.1 mouse_genomes_project 6 145246457 145313424 + MGP_129S1SvImJ_P0080781 Plekha5 protein_coding protein_coding MGP_129S1SvImJ_T0080782.1 MGP_129S1SvImJ_G0031448.1 mouse_genomes_project 6 145258327 145325102 + Plekha5 protein_coding processed_transcript MGP_129S1SvImJ_T0080783.1 MGP_129S1SvImJ_G0031448.1 mouse_genomes_project 6 145267128 145325102 + MGP_129S1SvImJ_P0080783 Plekha5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080784.1 MGP_129S1SvImJ_G0031448.1 mouse_genomes_project 6 145267154 145281097 + Plekha5 protein_coding processed_transcript MGP_129S1SvImJ_T0080785.1 MGP_129S1SvImJ_G0031448.1 mouse_genomes_project 6 145267158 145325102 + MGP_129S1SvImJ_P0080785 Plekha5 protein_coding protein_coding MGP_129S1SvImJ_T0080786.1 MGP_129S1SvImJ_G0031448.1 mouse_genomes_project 6 145267293 145325102 + MGP_129S1SvImJ_P0080786 Plekha5 protein_coding protein_coding MGP_129S1SvImJ_T0080787.1 MGP_129S1SvImJ_G0031448.1 mouse_genomes_project 6 145291632 145325108 + MGP_129S1SvImJ_P0080787 Plekha5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0080788.1 MGP_129S1SvImJ_G0031448.1 mouse_genomes_project 6 145292464 145303425 + Plekha5 protein_coding retained_intron MGP_129S1SvImJ_T0080789.1 MGP_129S1SvImJ_G0031448.1 mouse_genomes_project 6 145300890 145303432 + Plekha5 protein_coding retained_intron MGP_129S1SvImJ_T0080790.1 MGP_129S1SvImJ_G0031448.1 mouse_genomes_project 6 145301078 145325102 + MGP_129S1SvImJ_P0080790 Plekha5 protein_coding protein_coding MGP_129S1SvImJ_T0080791.1 MGP_129S1SvImJ_G0031448.1 mouse_genomes_project 6 145305509 145307729 + Plekha5 protein_coding retained_intron MGP_129S1SvImJ_T0080361.1 MGP_129S1SvImJ_G0031326.1 mouse_genomes_project 6 132018828 132036107 - MGP_129S1SvImJ_P0080361 Itfg2 protein_coding protein_coding MGP_129S1SvImJ_T0080362.1 MGP_129S1SvImJ_G0031326.1 mouse_genomes_project 6 132018881 132019755 - MGP_129S1SvImJ_P0080362 Itfg2 protein_coding protein_coding MGP_129S1SvImJ_T0080363.1 MGP_129S1SvImJ_G0031326.1 mouse_genomes_project 6 132018916 132036094 - MGP_129S1SvImJ_P0080363 Itfg2 protein_coding protein_coding MGP_129S1SvImJ_T0080364.1 MGP_129S1SvImJ_G0031326.1 mouse_genomes_project 6 132019586 132036045 - MGP_129S1SvImJ_P0080364 Itfg2 protein_coding protein_coding MGP_129S1SvImJ_T0080365.1 MGP_129S1SvImJ_G0031326.1 mouse_genomes_project 6 132019632 132020060 - Itfg2 protein_coding retained_intron MGP_129S1SvImJ_T0080366.1 MGP_129S1SvImJ_G0031326.1 mouse_genomes_project 6 132020962 132023705 - Itfg2 protein_coding retained_intron MGP_129S1SvImJ_T0080367.1 MGP_129S1SvImJ_G0031326.1 mouse_genomes_project 6 132022383 132036088 - MGP_129S1SvImJ_P0080367 Itfg2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080368.1 MGP_129S1SvImJ_G0031326.1 mouse_genomes_project 6 132023016 132036089 - MGP_129S1SvImJ_P0080368 Itfg2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080369.1 MGP_129S1SvImJ_G0031326.1 mouse_genomes_project 6 132024959 132036106 - Itfg2 protein_coding retained_intron MGP_129S1SvImJ_T0080370.1 MGP_129S1SvImJ_G0031326.1 mouse_genomes_project 6 132031854 132036094 - Itfg2 protein_coding retained_intron MGP_129S1SvImJ_T0001979.1 MGP_129S1SvImJ_G0001892.1 mouse_genomes_project 6 40209661 40213208 - TEC TEC MGP_129S1SvImJ_T0078595.1 MGP_129S1SvImJ_G0030981.1 mouse_genomes_project 6 87981390 87991942 - MGP_129S1SvImJ_P0078595 Snrnp27 protein_coding protein_coding MGP_129S1SvImJ_T0078596.1 MGP_129S1SvImJ_G0030981.1 mouse_genomes_project 6 87981644 87991911 - Snrnp27 protein_coding processed_transcript MGP_129S1SvImJ_T0078597.1 MGP_129S1SvImJ_G0030981.1 mouse_genomes_project 6 87981911 87991942 - MGP_129S1SvImJ_P0078597 Snrnp27 protein_coding protein_coding MGP_129S1SvImJ_T0078598.1 MGP_129S1SvImJ_G0030981.1 mouse_genomes_project 6 87990096 87991937 - Snrnp27 protein_coding processed_transcript MGP_129S1SvImJ_T0101954.1 MGP_129S1SvImJ_G0039838.1 mouse_genomes_project 6 132780423 132786397 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0079369.1 MGP_129S1SvImJ_G0031133.1 mouse_genomes_project 6 116161582 116170918 + MGP_129S1SvImJ_P0079369 Vhl protein_coding protein_coding MGP_129S1SvImJ_T0079370.1 MGP_129S1SvImJ_G0031133.1 mouse_genomes_project 6 116162344 116169046 + Vhl protein_coding processed_transcript MGP_129S1SvImJ_T0079371.1 MGP_129S1SvImJ_G0031133.1 mouse_genomes_project 6 116162552 116168842 + Vhl protein_coding processed_transcript MGP_129S1SvImJ_T0079372.1 MGP_129S1SvImJ_G0031133.1 mouse_genomes_project 6 116168791 116170912 + MGP_129S1SvImJ_P0079372 Vhl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080862.1 MGP_129S1SvImJ_G0031466.1 mouse_genomes_project 6 147281756 147299438 - MGP_129S1SvImJ_P0080862 Ldhb protein_coding protein_coding MGP_129S1SvImJ_T0080863.1 MGP_129S1SvImJ_G0031466.1 mouse_genomes_project 6 147281847 147292860 - MGP_129S1SvImJ_P0080863 Ldhb protein_coding protein_coding MGP_129S1SvImJ_T0080864.1 MGP_129S1SvImJ_G0031466.1 mouse_genomes_project 6 147287079 147299278 - MGP_129S1SvImJ_P0080864 Ldhb protein_coding protein_coding MGP_129S1SvImJ_T0077806.1 MGP_129S1SvImJ_G0030818.1 mouse_genomes_project 6 58454217 58468328 + MGP_129S1SvImJ_P0077806 Herc3 protein_coding protein_coding MGP_129S1SvImJ_T0077807.1 MGP_129S1SvImJ_G0030818.1 mouse_genomes_project 6 58454255 58468314 + MGP_129S1SvImJ_P0077807 Herc3 protein_coding protein_coding MGP_129S1SvImJ_T0077808.1 MGP_129S1SvImJ_G0030818.1 mouse_genomes_project 6 58454276 58479327 + MGP_129S1SvImJ_P0077808 Herc3 protein_coding protein_coding MGP_129S1SvImJ_T0077809.1 MGP_129S1SvImJ_G0030818.1 mouse_genomes_project 6 58454500 58479331 + MGP_129S1SvImJ_P0077809 Herc3 protein_coding protein_coding MGP_129S1SvImJ_T0077810.1 MGP_129S1SvImJ_G0030818.1 mouse_genomes_project 6 58454613 58529469 + MGP_129S1SvImJ_P0077810 Herc3 protein_coding protein_coding MGP_129S1SvImJ_T0077811.1 MGP_129S1SvImJ_G0030818.1 mouse_genomes_project 6 58456452 58551974 + MGP_129S1SvImJ_P0077811 Herc3 protein_coding protein_coding MGP_129S1SvImJ_T0077812.1 MGP_129S1SvImJ_G0030818.1 mouse_genomes_project 6 58487679 58499141 + Herc3 protein_coding retained_intron MGP_129S1SvImJ_T0077813.1 MGP_129S1SvImJ_G0030818.1 mouse_genomes_project 6 58499738 58500438 + Herc3 protein_coding processed_transcript MGP_129S1SvImJ_T0077814.1 MGP_129S1SvImJ_G0030818.1 mouse_genomes_project 6 58515490 58527939 + MGP_129S1SvImJ_P0077814 Herc3 protein_coding protein_coding MGP_129S1SvImJ_T0077815.1 MGP_129S1SvImJ_G0030818.1 mouse_genomes_project 6 58527135 58529897 + Herc3 protein_coding retained_intron MGP_129S1SvImJ_T0077818.1 MGP_129S1SvImJ_G0030818.1 mouse_genomes_project 6 58537834 58548399 + Herc3 protein_coding processed_transcript MGP_129S1SvImJ_T0077819.1 MGP_129S1SvImJ_G0030818.1 mouse_genomes_project 6 58540284 58551976 + MGP_129S1SvImJ_P0077819 Herc3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0077138.1 MGP_129S1SvImJ_G0030618.1 mouse_genomes_project 6 39370648 39375742 - MGP_129S1SvImJ_P0077138 Prss58 protein_coding protein_coding MGP_129S1SvImJ_T0077784.1 MGP_129S1SvImJ_G0030809.1 mouse_genomes_project 6 57499504 57500450 - MGP_129S1SvImJ_P0077784 Vmn1r24 protein_coding protein_coding MGP_129S1SvImJ_T0008647.1 MGP_129S1SvImJ_G0006994.1 mouse_genomes_project 6 79719374 79719694 - Gm29005 lincRNA lincRNA MGP_129S1SvImJ_T0077250.1 MGP_129S1SvImJ_G0030664.1 mouse_genomes_project 6 41376746 41380635 + MGP_129S1SvImJ_P0077250 Olfr449 protein_coding protein_coding MGP_129S1SvImJ_T0077251.1 MGP_129S1SvImJ_G0030664.1 mouse_genomes_project 6 41376746 41380821 + MGP_129S1SvImJ_P0077251 Olfr449 protein_coding protein_coding MGP_129S1SvImJ_T0077252.1 MGP_129S1SvImJ_G0030664.1 mouse_genomes_project 6 41376794 41380301 + MGP_129S1SvImJ_P0077252 Olfr449 protein_coding protein_coding MGP_129S1SvImJ_T0077253.1 MGP_129S1SvImJ_G0030664.1 mouse_genomes_project 6 41380212 41381249 + MGP_129S1SvImJ_P0077253 Olfr449 protein_coding protein_coding MGP_129S1SvImJ_T0018297.1 MGP_129S1SvImJ_G0015632.1 mouse_genomes_project 6 53315139 53354777 + 4921529L05Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018298.1 MGP_129S1SvImJ_G0015632.1 mouse_genomes_project 6 53315149 53318243 + 4921529L05Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018299.1 MGP_129S1SvImJ_G0015632.1 mouse_genomes_project 6 53315177 53347933 + 4921529L05Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018300.1 MGP_129S1SvImJ_G0015632.1 mouse_genomes_project 6 53347858 53355422 + 4921529L05Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0008691.1 MGP_129S1SvImJ_G0007026.1 mouse_genomes_project 6 100404386 100604919 - Gm44196 lincRNA lincRNA MGP_129S1SvImJ_T0008693.1 MGP_129S1SvImJ_G0007026.1 mouse_genomes_project 6 100572005 100604938 - Gm44196 lincRNA lincRNA MGP_129S1SvImJ_T0008694.1 MGP_129S1SvImJ_G0007026.1 mouse_genomes_project 6 100599646 100604968 - Gm44196 lincRNA lincRNA MGP_129S1SvImJ_T0015288.1 MGP_129S1SvImJ_G0013377.1 mouse_genomes_project 6 16105021 16105285 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078200.1 MGP_129S1SvImJ_G0030906.1 mouse_genomes_project 6 83704652 83757454 - MGP_129S1SvImJ_P0078200 Hk2 protein_coding protein_coding MGP_129S1SvImJ_T0078201.1 MGP_129S1SvImJ_G0030906.1 mouse_genomes_project 6 83704689 83705937 - Hk2 protein_coding processed_transcript MGP_129S1SvImJ_T0078202.1 MGP_129S1SvImJ_G0030906.1 mouse_genomes_project 6 83742166 83756427 - MGP_129S1SvImJ_P0078202 Hk2 protein_coding protein_coding MGP_129S1SvImJ_T0078589.1 MGP_129S1SvImJ_G0030978.1 mouse_genomes_project 6 87816037 87817869 - MGP_129S1SvImJ_P0078589 Pcbp1 protein_coding protein_coding MGP_129S1SvImJ_T0080489.1 MGP_129S1SvImJ_G0031366.1 mouse_genomes_project 6 135215013 135216374 - Magohb protein_coding retained_intron MGP_129S1SvImJ_T0080490.1 MGP_129S1SvImJ_G0031366.1 mouse_genomes_project 6 135215023 135223372 - MGP_129S1SvImJ_P0080490 Magohb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080491.1 MGP_129S1SvImJ_G0031366.1 mouse_genomes_project 6 135215129 135223406 - MGP_129S1SvImJ_P0080491 Magohb protein_coding protein_coding MGP_129S1SvImJ_T0080492.1 MGP_129S1SvImJ_G0031366.1 mouse_genomes_project 6 135215165 135219918 - Magohb protein_coding retained_intron MGP_129S1SvImJ_T0080493.1 MGP_129S1SvImJ_G0031366.1 mouse_genomes_project 6 135215201 135223392 - MGP_129S1SvImJ_P0080493 Magohb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080494.1 MGP_129S1SvImJ_G0031366.1 mouse_genomes_project 6 135218677 135223392 - MGP_129S1SvImJ_P0080494 Magohb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0002013.1 MGP_129S1SvImJ_G0001926.1 mouse_genomes_project 6 54288661 54291969 + TEC TEC MGP_129S1SvImJ_T0015293.1 MGP_129S1SvImJ_G0013382.1 mouse_genomes_project 6 17167443 17168405 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080507.1 MGP_129S1SvImJ_G0031371.1 mouse_genomes_project 6 135593657 135594747 - MGP_129S1SvImJ_P0080507 Tas2r130 protein_coding protein_coding MGP_129S1SvImJ_T0076945.1 MGP_129S1SvImJ_G0030571.1 mouse_genomes_project 6 33464196 33476889 - MGP_129S1SvImJ_P0076945 Fam180a protein_coding protein_coding MGP_129S1SvImJ_T0077156.1 MGP_129S1SvImJ_G0030631.1 mouse_genomes_project 6 40135069 40153379 - MGP_129S1SvImJ_P0077156 Trpv6 protein_coding protein_coding MGP_129S1SvImJ_T0077157.1 MGP_129S1SvImJ_G0030631.1 mouse_genomes_project 6 40135072 40153379 - MGP_129S1SvImJ_P0077157 Trpv6 protein_coding protein_coding MGP_129S1SvImJ_T0077158.1 MGP_129S1SvImJ_G0030631.1 mouse_genomes_project 6 40137940 40153354 - Trpv6 protein_coding retained_intron MGP_129S1SvImJ_T0077757.1 MGP_129S1SvImJ_G0030796.1 mouse_genomes_project 6 56864729 56865826 - MGP_129S1SvImJ_P0077757 Vmn1r17 protein_coding protein_coding MGP_129S1SvImJ_T0002102.1 MGP_129S1SvImJ_G0002015.1 mouse_genomes_project 6 92793251 92796084 - TEC TEC MGP_129S1SvImJ_T0077276.1 MGP_129S1SvImJ_G0030677.1 mouse_genomes_project 6 41934873 41940754 - MGP_129S1SvImJ_P0077276 Nobox protein_coding protein_coding MGP_129S1SvImJ_T0077277.1 MGP_129S1SvImJ_G0030677.1 mouse_genomes_project 6 41934899 41936335 - Nobox protein_coding processed_transcript MGP_129S1SvImJ_T0077278.1 MGP_129S1SvImJ_G0030677.1 mouse_genomes_project 6 41935097 41938436 - MGP_129S1SvImJ_P0077278 Nobox protein_coding protein_coding MGP_129S1SvImJ_T0015422.1 MGP_129S1SvImJ_G0013511.1 mouse_genomes_project 6 66517417 66518177 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005116.1 MGP_129S1SvImJ_G0004368.1 mouse_genomes_project 6 132051854 132094779 + Gm10069 antisense antisense MGP_129S1SvImJ_T0005117.1 MGP_129S1SvImJ_G0004368.1 mouse_genomes_project 6 132052439 132125159 + Gm10069 antisense antisense MGP_129S1SvImJ_T0005118.1 MGP_129S1SvImJ_G0004368.1 mouse_genomes_project 6 132091810 132109992 + Gm10069 antisense antisense MGP_129S1SvImJ_T0004947.1 MGP_129S1SvImJ_G0004249.1 mouse_genomes_project 6 32214749 32237019 + Gm13856 antisense antisense MGP_129S1SvImJ_T0015382.1 MGP_129S1SvImJ_G0013471.1 mouse_genomes_project 6 58029733 58029897 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015602.1 MGP_129S1SvImJ_G0013691.1 mouse_genomes_project 6 126298853 126298947 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079035.1 MGP_129S1SvImJ_G0031072.1 mouse_genomes_project 6 98937283 98976633 - MGP_129S1SvImJ_P0079035 Eogt protein_coding protein_coding MGP_129S1SvImJ_T0079036.1 MGP_129S1SvImJ_G0031072.1 mouse_genomes_project 6 98939231 98976334 - Eogt protein_coding processed_transcript MGP_129S1SvImJ_T0079037.1 MGP_129S1SvImJ_G0031072.1 mouse_genomes_project 6 98939260 98976378 - MGP_129S1SvImJ_P0079037 Eogt protein_coding protein_coding MGP_129S1SvImJ_T0079038.1 MGP_129S1SvImJ_G0031072.1 mouse_genomes_project 6 98939445 98947116 - Eogt protein_coding processed_transcript MGP_129S1SvImJ_T0079039.1 MGP_129S1SvImJ_G0031072.1 mouse_genomes_project 6 98963608 98975235 - MGP_129S1SvImJ_P0079039 Eogt protein_coding protein_coding MGP_129S1SvImJ_T0079040.1 MGP_129S1SvImJ_G0031072.1 mouse_genomes_project 6 98971430 98975245 - MGP_129S1SvImJ_P0079040 Eogt protein_coding protein_coding MGP_129S1SvImJ_T0079041.1 MGP_129S1SvImJ_G0031072.1 mouse_genomes_project 6 98972720 98976311 - MGP_129S1SvImJ_P0079041 Eogt protein_coding protein_coding MGP_129S1SvImJ_T0079042.1 MGP_129S1SvImJ_G0031072.1 mouse_genomes_project 6 98972774 98976375 - MGP_129S1SvImJ_P0079042 Eogt protein_coding protein_coding MGP_129S1SvImJ_T0078848.1 MGP_129S1SvImJ_G0031033.1 mouse_genomes_project 6 91831481 91835704 + MGP_129S1SvImJ_P0078848 BC048671 protein_coding protein_coding MGP_129S1SvImJ_T0078849.1 MGP_129S1SvImJ_G0031033.1 mouse_genomes_project 6 91832378 91835704 + MGP_129S1SvImJ_P0078849 BC048671 protein_coding protein_coding MGP_129S1SvImJ_T0008714.1 MGP_129S1SvImJ_G0007044.1 mouse_genomes_project 6 116170933 116172429 - 1700015O11Rik lincRNA lincRNA MGP_129S1SvImJ_T0005093.1 MGP_129S1SvImJ_G0004347.1 mouse_genomes_project 6 123410035 123410819 + Gm20692 antisense antisense MGP_129S1SvImJ_T0079494.1 MGP_129S1SvImJ_G0031155.1 mouse_genomes_project 6 118453844 118458695 - MGP_129S1SvImJ_P0079494 Rpl32 protein_coding protein_coding MGP_129S1SvImJ_T0079495.1 MGP_129S1SvImJ_G0031155.1 mouse_genomes_project 6 118453851 118458296 - MGP_129S1SvImJ_P0079495 Rpl32 protein_coding protein_coding MGP_129S1SvImJ_T0098615.1 MGP_129S1SvImJ_G0036700.1 mouse_genomes_project 6 9777432 9777552 + n-R5s160 rRNA rRNA MGP_129S1SvImJ_T0002708.1 MGP_129S1SvImJ_G0002589.1 mouse_genomes_project 6 39649142 39649637 + MGP_129S1SvImJ_P0002708 Trbv17 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0080535.1 MGP_129S1SvImJ_G0031397.1 mouse_genomes_project 6 137197446 137198385 - MGP_129S1SvImJ_P0080535 Tas2r103 protein_coding protein_coding MGP_129S1SvImJ_T0000157.1 MGP_129S1SvImJ_G0000120.1 mouse_genomes_project 6 68128881 68130145 + MGP_129S1SvImJ_P0000157 Igkv1-122 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0101942.1 MGP_129S1SvImJ_G0039833.1 mouse_genomes_project 6 86856249 86894383 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101943.1 MGP_129S1SvImJ_G0039833.1 mouse_genomes_project 6 86881002 86894383 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0002040.1 MGP_129S1SvImJ_G0001953.1 mouse_genomes_project 6 76250485 76251852 - TEC TEC MGP_129S1SvImJ_T0079053.1 MGP_129S1SvImJ_G0031076.1 mouse_genomes_project 6 99069610 99083583 - MGP_129S1SvImJ_P0079053 Lmod3 protein_coding protein_coding MGP_129S1SvImJ_T0076154.1 MGP_129S1SvImJ_G0030427.1 mouse_genomes_project 6 1255036 1267124 + MGP_129S1SvImJ_P0076154 Col1a2 protein_coding protein_coding MGP_129S1SvImJ_T0076155.1 MGP_129S1SvImJ_G0030427.1 mouse_genomes_project 6 1256148 1293568 + MGP_129S1SvImJ_P0076155 Col1a2 protein_coding protein_coding MGP_129S1SvImJ_T0076156.1 MGP_129S1SvImJ_G0030427.1 mouse_genomes_project 6 1256357 1265716 + Col1a2 protein_coding retained_intron MGP_129S1SvImJ_T0076157.1 MGP_129S1SvImJ_G0030427.1 mouse_genomes_project 6 1256357 1265211 + Col1a2 protein_coding retained_intron MGP_129S1SvImJ_T0076158.1 MGP_129S1SvImJ_G0030427.1 mouse_genomes_project 6 1272575 1281481 + Col1a2 protein_coding retained_intron MGP_129S1SvImJ_T0076159.1 MGP_129S1SvImJ_G0030427.1 mouse_genomes_project 6 1282185 1287909 + Col1a2 protein_coding retained_intron MGP_129S1SvImJ_T0076160.1 MGP_129S1SvImJ_G0030427.1 mouse_genomes_project 6 1287804 1288647 + Col1a2 protein_coding retained_intron MGP_129S1SvImJ_T0076161.1 MGP_129S1SvImJ_G0030427.1 mouse_genomes_project 6 1289512 1290014 + Col1a2 protein_coding retained_intron MGP_129S1SvImJ_T0011687.1 MGP_129S1SvImJ_G0009803.1 mouse_genomes_project 6 118392765 118393015 - Gm27853 misc_RNA misc_RNA MGP_129S1SvImJ_T0015497.1 MGP_129S1SvImJ_G0013586.1 mouse_genomes_project 6 86701740 86702209 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015505.1 MGP_129S1SvImJ_G0013594.1 mouse_genomes_project 6 91756990 91757572 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002705.1 MGP_129S1SvImJ_G0002586.1 mouse_genomes_project 6 39615568 39616040 + MGP_129S1SvImJ_P0002705 Trbv14 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0080955.1 MGP_129S1SvImJ_G0031479.1 mouse_genomes_project 6 150200814 150234355 - MGP_129S1SvImJ_P0080955 Kras protein_coding protein_coding MGP_129S1SvImJ_T0080956.1 MGP_129S1SvImJ_G0031479.1 mouse_genomes_project 6 150204117 150214970 - Kras protein_coding processed_transcript MGP_129S1SvImJ_T0080957.1 MGP_129S1SvImJ_G0031479.1 mouse_genomes_project 6 150204362 150234355 - MGP_129S1SvImJ_P0080957 Kras protein_coding protein_coding MGP_129S1SvImJ_T0080958.1 MGP_129S1SvImJ_G0031479.1 mouse_genomes_project 6 150204386 150234293 - MGP_129S1SvImJ_P0080958 Kras protein_coding protein_coding MGP_129S1SvImJ_T0080959.1 MGP_129S1SvImJ_G0031479.1 mouse_genomes_project 6 150204438 150234286 - MGP_129S1SvImJ_P0080959 Kras protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080960.1 MGP_129S1SvImJ_G0031479.1 mouse_genomes_project 6 150204753 150209700 - Kras protein_coding retained_intron MGP_129S1SvImJ_T0080961.1 MGP_129S1SvImJ_G0031479.1 mouse_genomes_project 6 150230819 150234318 - MGP_129S1SvImJ_P0080961 Kras protein_coding protein_coding MGP_129S1SvImJ_T0078760.1 MGP_129S1SvImJ_G0031013.1 mouse_genomes_project 6 90126327 90127900 + Mgll protein_coding processed_transcript MGP_129S1SvImJ_T0078761.1 MGP_129S1SvImJ_G0031013.1 mouse_genomes_project 6 90126338 90237296 + MGP_129S1SvImJ_P0078761 Mgll protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078762.1 MGP_129S1SvImJ_G0031013.1 mouse_genomes_project 6 90126351 90239901 + MGP_129S1SvImJ_P0078762 Mgll protein_coding protein_coding MGP_129S1SvImJ_T0078763.1 MGP_129S1SvImJ_G0031013.1 mouse_genomes_project 6 90126453 90172637 + MGP_129S1SvImJ_P0078763 Mgll protein_coding protein_coding MGP_129S1SvImJ_T0078764.1 MGP_129S1SvImJ_G0031013.1 mouse_genomes_project 6 90126934 90239785 + MGP_129S1SvImJ_P0078764 Mgll protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078765.1 MGP_129S1SvImJ_G0031013.1 mouse_genomes_project 6 90127008 90242273 + MGP_129S1SvImJ_P0078765 Mgll protein_coding protein_coding MGP_129S1SvImJ_T0078766.1 MGP_129S1SvImJ_G0031013.1 mouse_genomes_project 6 90237042 90239744 + Mgll protein_coding retained_intron MGP_129S1SvImJ_T0077448.1 MGP_129S1SvImJ_G0030716.1 mouse_genomes_project 6 47906990 47910783 + MGP_129S1SvImJ_P0077448 1600015I10Rik protein_coding protein_coding MGP_129S1SvImJ_T0004953.1 MGP_129S1SvImJ_G0004254.1 mouse_genomes_project 6 37263932 37332258 - Gm42962 antisense antisense MGP_129S1SvImJ_T0010776.1 MGP_129S1SvImJ_G0008892.1 mouse_genomes_project 6 28967125 28967213 - Mir29a miRNA miRNA MGP_129S1SvImJ_T0015310.1 MGP_129S1SvImJ_G0013399.1 mouse_genomes_project 6 27803858 27804065 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080099.1 MGP_129S1SvImJ_G0031274.1 mouse_genomes_project 6 128169042 128174440 - MGP_129S1SvImJ_P0080099 Gpr162 protein_coding protein_coding MGP_129S1SvImJ_T0080100.1 MGP_129S1SvImJ_G0031274.1 mouse_genomes_project 6 128169045 128174235 - Gpr162 protein_coding retained_intron MGP_129S1SvImJ_T0080101.1 MGP_129S1SvImJ_G0031274.1 mouse_genomes_project 6 128169046 128174506 - MGP_129S1SvImJ_P0080101 Gpr162 protein_coding protein_coding MGP_129S1SvImJ_T0080102.1 MGP_129S1SvImJ_G0031274.1 mouse_genomes_project 6 128172254 128174235 - Gpr162 protein_coding processed_transcript MGP_129S1SvImJ_T0001948.1 MGP_129S1SvImJ_G0001861.1 mouse_genomes_project 6 15012998 15014377 - TEC TEC MGP_129S1SvImJ_T0015295.1 MGP_129S1SvImJ_G0013384.1 mouse_genomes_project 6 18939426 18939646 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015535.1 MGP_129S1SvImJ_G0013624.1 mouse_genomes_project 6 103746836 103747290 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080421.1 MGP_129S1SvImJ_G0031342.1 mouse_genomes_project 6 132928737 132936845 - MGP_129S1SvImJ_P0080421 Cd69 protein_coding protein_coding MGP_129S1SvImJ_T0080422.1 MGP_129S1SvImJ_G0031342.1 mouse_genomes_project 6 132929671 132936775 - MGP_129S1SvImJ_P0080422 Cd69 protein_coding protein_coding MGP_129S1SvImJ_T0080423.1 MGP_129S1SvImJ_G0031342.1 mouse_genomes_project 6 132930863 132936778 - Cd69 protein_coding retained_intron MGP_129S1SvImJ_T0080424.1 MGP_129S1SvImJ_G0031342.1 mouse_genomes_project 6 132931814 132936778 - Cd69 protein_coding retained_intron MGP_129S1SvImJ_T0080425.1 MGP_129S1SvImJ_G0031342.1 mouse_genomes_project 6 132932577 132936778 - Cd69 protein_coding retained_intron MGP_129S1SvImJ_T0081033.1 MGP_129S1SvImJ_G0031493.1 mouse_genomes_project 6 151926112 152069805 + MGP_129S1SvImJ_P0081033 Ppfibp1 protein_coding protein_coding MGP_129S1SvImJ_T0081034.1 MGP_129S1SvImJ_G0031493.1 mouse_genomes_project 6 151926134 152013672 + MGP_129S1SvImJ_P0081034 Ppfibp1 protein_coding protein_coding MGP_129S1SvImJ_T0081035.1 MGP_129S1SvImJ_G0031493.1 mouse_genomes_project 6 151926214 152069805 + MGP_129S1SvImJ_P0081035 Ppfibp1 protein_coding protein_coding MGP_129S1SvImJ_T0081038.1 MGP_129S1SvImJ_G0031493.1 mouse_genomes_project 6 152012090 152030216 + MGP_129S1SvImJ_P0081038 Ppfibp1 protein_coding protein_coding MGP_129S1SvImJ_T0081039.1 MGP_129S1SvImJ_G0031493.1 mouse_genomes_project 6 152030260 152043692 + MGP_129S1SvImJ_P0081039 Ppfibp1 protein_coding protein_coding MGP_129S1SvImJ_T0081040.1 MGP_129S1SvImJ_G0031493.1 mouse_genomes_project 6 152034152 152039932 + Ppfibp1 protein_coding processed_transcript MGP_129S1SvImJ_T0081041.1 MGP_129S1SvImJ_G0031493.1 mouse_genomes_project 6 152037238 152069803 + Ppfibp1 protein_coding retained_intron MGP_129S1SvImJ_T0081042.1 MGP_129S1SvImJ_G0031493.1 mouse_genomes_project 6 152038000 152055217 + Ppfibp1 protein_coding retained_intron MGP_129S1SvImJ_T0081043.1 MGP_129S1SvImJ_G0031493.1 mouse_genomes_project 6 152039376 152043720 + Ppfibp1 protein_coding retained_intron MGP_129S1SvImJ_T0081044.1 MGP_129S1SvImJ_G0031493.1 mouse_genomes_project 6 152039925 152056950 + MGP_129S1SvImJ_P0081044 Ppfibp1 protein_coding protein_coding MGP_129S1SvImJ_T0081045.1 MGP_129S1SvImJ_G0031493.1 mouse_genomes_project 6 152042793 152044050 + Ppfibp1 protein_coding retained_intron MGP_129S1SvImJ_T0081046.1 MGP_129S1SvImJ_G0031493.1 mouse_genomes_project 6 152048650 152057358 + MGP_129S1SvImJ_P0081046 Ppfibp1 protein_coding protein_coding MGP_129S1SvImJ_T0005648.1 MGP_129S1SvImJ_G0004759.1 mouse_genomes_project 6 89032376 89039281 + E230015B07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0005649.1 MGP_129S1SvImJ_G0004759.1 mouse_genomes_project 6 89032424 89041019 + E230015B07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0005650.1 MGP_129S1SvImJ_G0004759.1 mouse_genomes_project 6 89032424 89040232 + E230015B07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0080251.1 MGP_129S1SvImJ_G0031300.1 mouse_genomes_project 6 129072291 129350130 + Ano2 protein_coding retained_intron MGP_129S1SvImJ_T0080252.1 MGP_129S1SvImJ_G0031300.1 mouse_genomes_project 6 129072291 129436017 + MGP_129S1SvImJ_P0080252 Ano2 protein_coding protein_coding MGP_129S1SvImJ_T0080253.1 MGP_129S1SvImJ_G0031300.1 mouse_genomes_project 6 129072606 129435405 + MGP_129S1SvImJ_P0080253 Ano2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0080254.1 MGP_129S1SvImJ_G0031300.1 mouse_genomes_project 6 129092511 129436017 + MGP_129S1SvImJ_P0080254 Ano2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080255.1 MGP_129S1SvImJ_G0031300.1 mouse_genomes_project 6 129093361 129183847 + Ano2 protein_coding processed_transcript MGP_129S1SvImJ_T0080256.1 MGP_129S1SvImJ_G0031300.1 mouse_genomes_project 6 129206446 129294027 + Ano2 protein_coding processed_transcript MGP_129S1SvImJ_T0080257.1 MGP_129S1SvImJ_G0031300.1 mouse_genomes_project 6 129206447 129436015 + MGP_129S1SvImJ_P0080257 Ano2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080967.1 MGP_129S1SvImJ_G0031481.1 mouse_genomes_project 6 150626399 150635036 + MGP_129S1SvImJ_P0080967 protein_coding protein_coding MGP_129S1SvImJ_T0015568.1 MGP_129S1SvImJ_G0013657.1 mouse_genomes_project 6 117323427 117328154 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015258.1 MGP_129S1SvImJ_G0013347.1 mouse_genomes_project 6 3644495 3645560 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005011.1 MGP_129S1SvImJ_G0004297.1 mouse_genomes_project 6 84129960 84131831 + Gm44287 antisense antisense MGP_129S1SvImJ_T0000298.1 MGP_129S1SvImJ_G0000240.1 mouse_genomes_project 6 67744170 67744667 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0076590.1 MGP_129S1SvImJ_G0030515.1 mouse_genomes_project 6 26935339 26947900 - MGP_129S1SvImJ_P0076590 Prrt4 protein_coding protein_coding MGP_129S1SvImJ_T0077423.1 MGP_129S1SvImJ_G0030711.1 mouse_genomes_project 6 47703586 47712980 + MGP_129S1SvImJ_P0077423 Gimap5 protein_coding protein_coding MGP_129S1SvImJ_T0077424.1 MGP_129S1SvImJ_G0030711.1 mouse_genomes_project 6 47703587 47704875 + Gimap5 protein_coding processed_transcript MGP_129S1SvImJ_T0077425.1 MGP_129S1SvImJ_G0030711.1 mouse_genomes_project 6 47703588 47704902 + Gimap5 protein_coding processed_transcript MGP_129S1SvImJ_T0077426.1 MGP_129S1SvImJ_G0030711.1 mouse_genomes_project 6 47703688 47706016 + Gimap5 protein_coding retained_intron MGP_129S1SvImJ_T0015285.1 MGP_129S1SvImJ_G0013374.1 mouse_genomes_project 6 14975074 14976323 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080530.1 MGP_129S1SvImJ_G0031392.1 mouse_genomes_project 6 137051848 137052778 + MGP_129S1SvImJ_P0080530 Tas2r113 protein_coding protein_coding MGP_129S1SvImJ_T0078363.1 MGP_129S1SvImJ_G0030938.1 mouse_genomes_project 6 84774403 84792413 + MGP_129S1SvImJ_P0078363 Atp6v1b1 protein_coding protein_coding MGP_129S1SvImJ_T0078364.1 MGP_129S1SvImJ_G0030938.1 mouse_genomes_project 6 84774462 84784142 + Atp6v1b1 protein_coding processed_transcript MGP_129S1SvImJ_T0078365.1 MGP_129S1SvImJ_G0030938.1 mouse_genomes_project 6 84774477 84784670 + MGP_129S1SvImJ_P0078365 Atp6v1b1 protein_coding protein_coding MGP_129S1SvImJ_T0078366.1 MGP_129S1SvImJ_G0030938.1 mouse_genomes_project 6 84774507 84788317 + MGP_129S1SvImJ_P0078366 Atp6v1b1 protein_coding protein_coding MGP_129S1SvImJ_T0078367.1 MGP_129S1SvImJ_G0030938.1 mouse_genomes_project 6 84785197 84787225 + Atp6v1b1 protein_coding retained_intron MGP_129S1SvImJ_T0078368.1 MGP_129S1SvImJ_G0030938.1 mouse_genomes_project 6 84790696 84791790 + Atp6v1b1 protein_coding retained_intron MGP_129S1SvImJ_T0011691.1 MGP_129S1SvImJ_G0009807.1 mouse_genomes_project 6 145254115 145254368 + Gm25780 misc_RNA misc_RNA MGP_129S1SvImJ_T0015399.1 MGP_129S1SvImJ_G0013488.1 mouse_genomes_project 6 63668281 63668497 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015658.1 MGP_129S1SvImJ_G0013747.1 mouse_genomes_project 6 139464008 139464387 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002153.1 MGP_129S1SvImJ_G0002066.1 mouse_genomes_project 6 120624043 120625914 - TEC TEC MGP_129S1SvImJ_T0002154.1 MGP_129S1SvImJ_G0002066.1 mouse_genomes_project 6 120625264 120625915 - TEC TEC MGP_129S1SvImJ_T0080512.1 MGP_129S1SvImJ_G0031376.1 mouse_genomes_project 6 135648511 135649441 - MGP_129S1SvImJ_P0080512 Tas2r114 protein_coding protein_coding MGP_129S1SvImJ_T0000238.1 MGP_129S1SvImJ_G0000184.1 mouse_genomes_project 6 71013744 71110614 + MGP_129S1SvImJ_P0000238 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0008706.1 MGP_129S1SvImJ_G0007036.1 mouse_genomes_project 6 103926559 103933415 + Gm44176 lincRNA lincRNA MGP_129S1SvImJ_T0005086.1 MGP_129S1SvImJ_G0004340.1 mouse_genomes_project 6 116261270 116262421 + Gm26982 antisense antisense MGP_129S1SvImJ_T0080316.1 MGP_129S1SvImJ_G0031315.1 mouse_genomes_project 6 131086092 131161185 + MGP_129S1SvImJ_P0080316 Cracr2a protein_coding protein_coding MGP_129S1SvImJ_T0080317.1 MGP_129S1SvImJ_G0031315.1 mouse_genomes_project 6 131102708 131161090 + MGP_129S1SvImJ_P0080317 Cracr2a protein_coding protein_coding MGP_129S1SvImJ_T0076193.1 MGP_129S1SvImJ_G0030432.1 mouse_genomes_project 6 1992679 2021042 - MGP_129S1SvImJ_P0076193 Pon1 protein_coding protein_coding MGP_129S1SvImJ_T0076194.1 MGP_129S1SvImJ_G0030432.1 mouse_genomes_project 6 1993084 2020880 - MGP_129S1SvImJ_P0076194 Pon1 protein_coding protein_coding MGP_129S1SvImJ_T0076195.1 MGP_129S1SvImJ_G0030432.1 mouse_genomes_project 6 1997627 2020880 - MGP_129S1SvImJ_P0076195 Pon1 protein_coding protein_coding MGP_129S1SvImJ_T0076196.1 MGP_129S1SvImJ_G0030432.1 mouse_genomes_project 6 2012649 2020859 - Pon1 protein_coding retained_intron MGP_129S1SvImJ_T0077236.1 MGP_129S1SvImJ_G0030658.1 mouse_genomes_project 6 41146528 41168601 - MGP_129S1SvImJ_P0077236 Tcaf2 protein_coding protein_coding MGP_129S1SvImJ_T0077237.1 MGP_129S1SvImJ_G0030658.1 mouse_genomes_project 6 41149922 41152953 - Tcaf2 protein_coding retained_intron MGP_129S1SvImJ_T0102635.1 MGP_129S1SvImJ_G0040468.1 mouse_genomes_project 6 91533196 91533434 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002755.1 MGP_129S1SvImJ_G0002630.1 mouse_genomes_project 6 39662737 39663031 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0001965.1 MGP_129S1SvImJ_G0001878.1 mouse_genomes_project 6 28026073 28028295 + TEC TEC MGP_129S1SvImJ_T0015440.1 MGP_129S1SvImJ_G0013529.1 mouse_genomes_project 6 68339359 68340056 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102630.1 MGP_129S1SvImJ_G0040463.1 mouse_genomes_project 6 87408079 87409122 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015504.1 MGP_129S1SvImJ_G0013593.1 mouse_genomes_project 6 90296345 90296868 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011681.1 MGP_129S1SvImJ_G0009797.1 mouse_genomes_project 6 101533805 101534052 + Gm24936 misc_RNA misc_RNA MGP_129S1SvImJ_T0079937.1 MGP_129S1SvImJ_G0031234.1 mouse_genomes_project 6 125970569 125979598 - MGP_129S1SvImJ_P0079937 C3ar1 protein_coding protein_coding MGP_129S1SvImJ_T0001935.1 MGP_129S1SvImJ_G0001848.1 mouse_genomes_project 6 1750575 1751803 + TEC TEC MGP_129S1SvImJ_T0080130.1 MGP_129S1SvImJ_G0031280.1 mouse_genomes_project 6 128310503 128318667 + MGP_129S1SvImJ_P0080130 Pianp protein_coding protein_coding MGP_129S1SvImJ_T0080131.1 MGP_129S1SvImJ_G0031280.1 mouse_genomes_project 6 128310671 128318667 + MGP_129S1SvImJ_P0080131 Pianp protein_coding protein_coding MGP_129S1SvImJ_T0080132.1 MGP_129S1SvImJ_G0031280.1 mouse_genomes_project 6 128310884 128315302 + MGP_129S1SvImJ_P0080132 Pianp protein_coding protein_coding MGP_129S1SvImJ_T0080133.1 MGP_129S1SvImJ_G0031280.1 mouse_genomes_project 6 128312246 128318667 + MGP_129S1SvImJ_P0080133 Pianp protein_coding protein_coding MGP_129S1SvImJ_T0080134.1 MGP_129S1SvImJ_G0031280.1 mouse_genomes_project 6 128312419 128317714 + MGP_129S1SvImJ_P0080134 Pianp protein_coding protein_coding MGP_129S1SvImJ_T0080135.1 MGP_129S1SvImJ_G0031280.1 mouse_genomes_project 6 128312448 128313255 + MGP_129S1SvImJ_P0080135 Pianp protein_coding protein_coding MGP_129S1SvImJ_T0080136.1 MGP_129S1SvImJ_G0031280.1 mouse_genomes_project 6 128315232 128316620 + MGP_129S1SvImJ_P0080136 Pianp protein_coding protein_coding MGP_129S1SvImJ_T0018326.1 MGP_129S1SvImJ_G0015642.1 mouse_genomes_project 6 84447403 84453969 + B230319C09Rik processed_transcript antisense MGP_129S1SvImJ_T0018327.1 MGP_129S1SvImJ_G0015642.1 mouse_genomes_project 6 84447458 84451007 + B230319C09Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018328.1 MGP_129S1SvImJ_G0015642.1 mouse_genomes_project 6 84447460 84448289 + B230319C09Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0076847.1 MGP_129S1SvImJ_G0030555.1 mouse_genomes_project 6 32216200 32239895 - MGP_129S1SvImJ_P0076847 Slc35b4 protein_coding protein_coding MGP_129S1SvImJ_T0076848.1 MGP_129S1SvImJ_G0030555.1 mouse_genomes_project 6 32219539 32226293 - Slc35b4 protein_coding retained_intron MGP_129S1SvImJ_T0076849.1 MGP_129S1SvImJ_G0030555.1 mouse_genomes_project 6 32220901 32239754 - Slc35b4 protein_coding retained_intron MGP_129S1SvImJ_T0076850.1 MGP_129S1SvImJ_G0030555.1 mouse_genomes_project 6 32223334 32239866 - MGP_129S1SvImJ_P0076850 Slc35b4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0008622.1 MGP_129S1SvImJ_G0006971.1 mouse_genomes_project 6 55102021 55112036 + Gm3279 lincRNA lincRNA MGP_129S1SvImJ_T0015375.1 MGP_129S1SvImJ_G0013464.1 mouse_genomes_project 6 52343713 52344253 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002046.1 MGP_129S1SvImJ_G0001959.1 mouse_genomes_project 6 78349174 78352410 - TEC TEC MGP_129S1SvImJ_T0079195.1 MGP_129S1SvImJ_G0031101.1 mouse_genomes_project 6 110939179 110945488 + MGP_129S1SvImJ_P0079195 Bhlhe40 protein_coding protein_coding MGP_129S1SvImJ_T0079196.1 MGP_129S1SvImJ_G0031101.1 mouse_genomes_project 6 110939349 110939885 + Bhlhe40 protein_coding retained_intron MGP_129S1SvImJ_T0079197.1 MGP_129S1SvImJ_G0031101.1 mouse_genomes_project 6 110939424 110941251 + MGP_129S1SvImJ_P0079197 Bhlhe40 protein_coding protein_coding MGP_129S1SvImJ_T0079198.1 MGP_129S1SvImJ_G0031101.1 mouse_genomes_project 6 110941608 110944228 + Bhlhe40 protein_coding retained_intron MGP_129S1SvImJ_T0079043.1 MGP_129S1SvImJ_G0031073.1 mouse_genomes_project 6 98980447 99008223 - MGP_129S1SvImJ_P0079043 Tmf1 protein_coding protein_coding MGP_129S1SvImJ_T0079044.1 MGP_129S1SvImJ_G0031073.1 mouse_genomes_project 6 98983451 99008138 - MGP_129S1SvImJ_P0079044 Tmf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079045.1 MGP_129S1SvImJ_G0031073.1 mouse_genomes_project 6 98989513 98997893 - Tmf1 protein_coding processed_transcript MGP_129S1SvImJ_T0079111.1 MGP_129S1SvImJ_G0031083.1 mouse_genomes_project 6 101656830 101659218 + MGP_129S1SvImJ_P0079111 Gpr27 protein_coding protein_coding MGP_129S1SvImJ_T0102652.1 MGP_129S1SvImJ_G0040485.1 mouse_genomes_project 6 136848544 136848911 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0098985.1 MGP_129S1SvImJ_G0037059.1 mouse_genomes_project 6 88310608 88311256 + Gm44091 sense_intronic sense_intronic MGP_129S1SvImJ_T0015528.1 MGP_129S1SvImJ_G0013617.1 mouse_genomes_project 6 101741526 101741992 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077427.1 MGP_129S1SvImJ_G0030712.1 mouse_genomes_project 6 47725916 47732304 - MGP_129S1SvImJ_P0077427 Gimap3 protein_coding protein_coding MGP_129S1SvImJ_T0077428.1 MGP_129S1SvImJ_G0030712.1 mouse_genomes_project 6 47725918 47728411 - MGP_129S1SvImJ_P0077428 Gimap3 protein_coding protein_coding MGP_129S1SvImJ_T0078973.1 MGP_129S1SvImJ_G0031056.1 mouse_genomes_project 6 93805530 93816551 - MGP_129S1SvImJ_P0078973 Mrps25 protein_coding protein_coding MGP_129S1SvImJ_T0078974.1 MGP_129S1SvImJ_G0031056.1 mouse_genomes_project 6 93807360 93808425 - Mrps25 protein_coding retained_intron MGP_129S1SvImJ_T0078975.1 MGP_129S1SvImJ_G0031056.1 mouse_genomes_project 6 93810831 93816489 - Mrps25 protein_coding retained_intron MGP_129S1SvImJ_T0015557.1 MGP_129S1SvImJ_G0013646.1 mouse_genomes_project 6 114838368 114838836 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015546.1 MGP_129S1SvImJ_G0013635.1 mouse_genomes_project 6 109749528 109750177 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098620.1 MGP_129S1SvImJ_G0036705.1 mouse_genomes_project 6 88628052 88628164 + n-R5s164 rRNA rRNA MGP_129S1SvImJ_T0015267.1 MGP_129S1SvImJ_G0013356.1 mouse_genomes_project 6 6086693 6087006 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078385.1 MGP_129S1SvImJ_G0030942.1 mouse_genomes_project 6 84841132 84869000 - MGP_129S1SvImJ_P0078385 Paip2b protein_coding protein_coding MGP_129S1SvImJ_T0078386.1 MGP_129S1SvImJ_G0030942.1 mouse_genomes_project 6 84844495 84846035 - Paip2b protein_coding retained_intron MGP_129S1SvImJ_T0078387.1 MGP_129S1SvImJ_G0030942.1 mouse_genomes_project 6 84845548 84868972 - Paip2b protein_coding retained_intron MGP_129S1SvImJ_T0078388.1 MGP_129S1SvImJ_G0030942.1 mouse_genomes_project 6 84848699 84868972 - Paip2b protein_coding retained_intron MGP_129S1SvImJ_T0078389.1 MGP_129S1SvImJ_G0030942.1 mouse_genomes_project 6 84868715 84868959 - Paip2b protein_coding retained_intron MGP_129S1SvImJ_T0002700.1 MGP_129S1SvImJ_G0002582.1 mouse_genomes_project 6 39596161 39596623 + MGP_129S1SvImJ_P0002700 Trbv13-1 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002701.1 MGP_129S1SvImJ_G0002582.1 mouse_genomes_project 6 39596190 39596623 + MGP_129S1SvImJ_P0002701 Trbv13-1 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0080088.1 MGP_129S1SvImJ_G0031272.1 mouse_genomes_project 6 128141026 128147063 - MGP_129S1SvImJ_P0080088 Gnb3 protein_coding protein_coding MGP_129S1SvImJ_T0080089.1 MGP_129S1SvImJ_G0031272.1 mouse_genomes_project 6 128141033 128146745 - Gnb3 protein_coding retained_intron MGP_129S1SvImJ_T0080090.1 MGP_129S1SvImJ_G0031272.1 mouse_genomes_project 6 128141465 128143085 - Gnb3 protein_coding processed_transcript MGP_129S1SvImJ_T0080091.1 MGP_129S1SvImJ_G0031272.1 mouse_genomes_project 6 128145886 128146871 - Gnb3 protein_coding retained_intron MGP_129S1SvImJ_T0015662.1 MGP_129S1SvImJ_G0013751.1 mouse_genomes_project 6 140907785 140908179 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001969.1 MGP_129S1SvImJ_G0001882.1 mouse_genomes_project 6 31055726 31058722 - TEC TEC MGP_129S1SvImJ_T0080655.1 MGP_129S1SvImJ_G0031424.1 mouse_genomes_project 6 141139000 141229165 - MGP_129S1SvImJ_P0080655 Gucy2c protein_coding protein_coding MGP_129S1SvImJ_T0080656.1 MGP_129S1SvImJ_G0031424.1 mouse_genomes_project 6 141139001 141229142 - MGP_129S1SvImJ_P0080656 Gucy2c protein_coding protein_coding MGP_129S1SvImJ_T0011659.1 MGP_129S1SvImJ_G0009775.1 mouse_genomes_project 6 46693690 46693802 - Rny1 misc_RNA misc_RNA MGP_129S1SvImJ_T0011679.1 MGP_129S1SvImJ_G0009795.1 mouse_genomes_project 6 86179149 86179404 + Gm26353 misc_RNA misc_RNA MGP_129S1SvImJ_T0076737.1 MGP_129S1SvImJ_G0030536.1 mouse_genomes_project 6 28282022 28340306 + MGP_129S1SvImJ_P0076737 Klhdc10 protein_coding protein_coding MGP_129S1SvImJ_T0076738.1 MGP_129S1SvImJ_G0030536.1 mouse_genomes_project 6 28282148 28342202 + MGP_129S1SvImJ_P0076738 Klhdc10 protein_coding protein_coding MGP_129S1SvImJ_T0076739.1 MGP_129S1SvImJ_G0030536.1 mouse_genomes_project 6 28282152 28337580 + MGP_129S1SvImJ_P0076739 Klhdc10 protein_coding protein_coding MGP_129S1SvImJ_T0076740.1 MGP_129S1SvImJ_G0030536.1 mouse_genomes_project 6 28298225 28334465 + MGP_129S1SvImJ_P0076740 Klhdc10 protein_coding protein_coding MGP_129S1SvImJ_T0076741.1 MGP_129S1SvImJ_G0030536.1 mouse_genomes_project 6 28330809 28337859 + Klhdc10 protein_coding retained_intron MGP_129S1SvImJ_T0080622.1 MGP_129S1SvImJ_G0031418.1 mouse_genomes_project 6 139654189 139655468 - MGP_129S1SvImJ_P0080622 Pbp2 protein_coding protein_coding MGP_129S1SvImJ_T0008597.1 MGP_129S1SvImJ_G0006953.1 mouse_genomes_project 6 49141376 49196260 + Gm3455 lincRNA lincRNA MGP_129S1SvImJ_T0018342.1 MGP_129S1SvImJ_G0015648.1 mouse_genomes_project 6 128364070 128377021 + Gm44597 processed_transcript retained_intron MGP_129S1SvImJ_T0018343.1 MGP_129S1SvImJ_G0015648.1 mouse_genomes_project 6 128364099 128376978 + Gm44597 processed_transcript retained_intron MGP_129S1SvImJ_T0101247.1 MGP_129S1SvImJ_G0039314.1 mouse_genomes_project 6 56035517 56035649 - Gm24709 snoRNA snoRNA MGP_129S1SvImJ_T0002138.1 MGP_129S1SvImJ_G0002051.1 mouse_genomes_project 6 114520475 114521031 - TEC TEC MGP_129S1SvImJ_T0101274.1 MGP_129S1SvImJ_G0039341.1 mouse_genomes_project 6 118365648 118365786 - Gm24008 snoRNA snoRNA MGP_129S1SvImJ_T0002155.1 MGP_129S1SvImJ_G0002067.1 mouse_genomes_project 6 120634690 120635882 - TEC TEC MGP_129S1SvImJ_T0015256.1 MGP_129S1SvImJ_G0013345.1 mouse_genomes_project 6 3229887 3230112 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102592.1 MGP_129S1SvImJ_G0040425.1 mouse_genomes_project 6 32448326 32460518 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002759.1 MGP_129S1SvImJ_G0002634.1 mouse_genomes_project 6 39736524 39736801 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0002146.1 MGP_129S1SvImJ_G0002059.1 mouse_genomes_project 6 118238940 118239350 + TEC TEC MGP_129S1SvImJ_T0078261.1 MGP_129S1SvImJ_G0030917.1 mouse_genomes_project 6 84105183 84115834 + MGP_129S1SvImJ_P0078261 protein_coding protein_coding MGP_129S1SvImJ_T0078263.1 MGP_129S1SvImJ_G0030917.1 mouse_genomes_project 6 84105240 84107437 + protein_coding retained_intron MGP_129S1SvImJ_T0078264.1 MGP_129S1SvImJ_G0030917.1 mouse_genomes_project 6 84114540 84115274 + protein_coding retained_intron MGP_129S1SvImJ_T0011643.1 MGP_129S1SvImJ_G0009759.1 mouse_genomes_project 6 14952999 14953131 + Gm27755 misc_RNA misc_RNA MGP_129S1SvImJ_T0077315.1 MGP_129S1SvImJ_G0030683.1 mouse_genomes_project 6 46701813 46719102 - MGP_129S1SvImJ_P0077315 Pdia4 protein_coding protein_coding MGP_129S1SvImJ_T0077316.1 MGP_129S1SvImJ_G0030683.1 mouse_genomes_project 6 46712684 46719036 - Pdia4 protein_coding processed_transcript MGP_129S1SvImJ_T0076150.1 MGP_129S1SvImJ_G0030425.1 mouse_genomes_project 6 737466 742016 + MGP_129S1SvImJ_P0076150 Gng11 protein_coding protein_coding MGP_129S1SvImJ_T0098982.1 MGP_129S1SvImJ_G0037056.1 mouse_genomes_project 6 38563726 38576266 + Gm26638 sense_intronic sense_intronic MGP_129S1SvImJ_T0078297.1 MGP_129S1SvImJ_G0030925.1 mouse_genomes_project 6 84163152 84169673 + MGP_129S1SvImJ_P0078297 1700003E16Rik protein_coding protein_coding MGP_129S1SvImJ_T0078298.1 MGP_129S1SvImJ_G0030925.1 mouse_genomes_project 6 84163249 84169619 + MGP_129S1SvImJ_P0078298 1700003E16Rik protein_coding protein_coding MGP_129S1SvImJ_T0079664.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121340693 121982659 - MGP_129S1SvImJ_P0079664 Cacna1c protein_coding protein_coding MGP_129S1SvImJ_T0079665.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121345591 121348714 - Cacna1c protein_coding processed_transcript MGP_129S1SvImJ_T0079666.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121345606 121516335 - Cacna1c protein_coding processed_transcript MGP_129S1SvImJ_T0079667.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121345751 121885458 - MGP_129S1SvImJ_P0079667 Cacna1c protein_coding protein_coding MGP_129S1SvImJ_T0079668.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121346230 121885505 - MGP_129S1SvImJ_P0079668 Cacna1c protein_coding protein_coding MGP_129S1SvImJ_T0079669.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121346230 121885458 - MGP_129S1SvImJ_P0079669 Cacna1c protein_coding protein_coding MGP_129S1SvImJ_T0079670.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121346370 121982846 - MGP_129S1SvImJ_P0079670 Cacna1c protein_coding protein_coding MGP_129S1SvImJ_T0079671.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121346934 121982815 - MGP_129S1SvImJ_P0079671 Cacna1c protein_coding protein_coding MGP_129S1SvImJ_T0079672.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121346934 121885775 - MGP_129S1SvImJ_P0079672 Cacna1c protein_coding protein_coding MGP_129S1SvImJ_T0079673.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121347081 121885244 - MGP_129S1SvImJ_P0079673 Cacna1c protein_coding protein_coding MGP_129S1SvImJ_T0079674.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121347081 121885244 - MGP_129S1SvImJ_P0079674 Cacna1c protein_coding protein_coding MGP_129S1SvImJ_T0079675.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121347081 121885244 - MGP_129S1SvImJ_P0079675 Cacna1c protein_coding protein_coding MGP_129S1SvImJ_T0079676.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121347081 121885244 - MGP_129S1SvImJ_P0079676 Cacna1c protein_coding protein_coding MGP_129S1SvImJ_T0079677.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121347081 121885244 - MGP_129S1SvImJ_P0079677 Cacna1c protein_coding protein_coding MGP_129S1SvImJ_T0079678.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121347081 121885244 - MGP_129S1SvImJ_P0079678 Cacna1c protein_coding protein_coding MGP_129S1SvImJ_T0079679.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121347087 121852915 - MGP_129S1SvImJ_P0079679 Cacna1c protein_coding protein_coding MGP_129S1SvImJ_T0079680.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121347180 121885244 - MGP_129S1SvImJ_P0079680 Cacna1c protein_coding protein_coding MGP_129S1SvImJ_T0079681.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121347180 121885244 - MGP_129S1SvImJ_P0079681 Cacna1c protein_coding protein_coding MGP_129S1SvImJ_T0079682.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121347180 121982659 - MGP_129S1SvImJ_P0079682 Cacna1c protein_coding protein_coding MGP_129S1SvImJ_T0079683.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121368852 121383691 - Cacna1c protein_coding processed_transcript MGP_129S1SvImJ_T0079684.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121460533 121465460 - Cacna1c protein_coding retained_intron MGP_129S1SvImJ_T0079685.1 MGP_129S1SvImJ_G0031189.1 mouse_genomes_project 6 121712790 121982837 - Cacna1c protein_coding processed_transcript MGP_129S1SvImJ_T0015578.1 MGP_129S1SvImJ_G0013667.1 mouse_genomes_project 6 119915964 119916341 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000228.1 MGP_129S1SvImJ_G0000175.1 mouse_genomes_project 6 70786612 70786917 - MGP_129S1SvImJ_P0000228 Igkv8-19 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0080671.1 MGP_129S1SvImJ_G0031429.1 mouse_genomes_project 6 141336081 141340263 - MGP_129S1SvImJ_P0080671 Smco3 protein_coding protein_coding MGP_129S1SvImJ_T0077152.1 MGP_129S1SvImJ_G0030630.1 mouse_genomes_project 6 40119930 40134958 + MGP_129S1SvImJ_P0077152 Ephb6 protein_coding protein_coding MGP_129S1SvImJ_T0077153.1 MGP_129S1SvImJ_G0030630.1 mouse_genomes_project 6 40127746 40129060 + Ephb6 protein_coding processed_transcript MGP_129S1SvImJ_T0077154.1 MGP_129S1SvImJ_G0030630.1 mouse_genomes_project 6 40129140 40131206 + MGP_129S1SvImJ_P0077154 Ephb6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077155.1 MGP_129S1SvImJ_G0030630.1 mouse_genomes_project 6 40134391 40134956 + MGP_129S1SvImJ_P0077155 Ephb6 protein_coding protein_coding MGP_129S1SvImJ_T0002025.1 MGP_129S1SvImJ_G0001938.1 mouse_genomes_project 6 71912999 71916003 - TEC TEC MGP_129S1SvImJ_T0004994.1 MGP_129S1SvImJ_G0004286.1 mouse_genomes_project 6 72466950 72469581 - Gm26628 antisense antisense MGP_129S1SvImJ_T0015364.1 MGP_129S1SvImJ_G0013453.1 mouse_genomes_project 6 48584808 48585554 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080110.1 MGP_129S1SvImJ_G0031277.1 mouse_genomes_project 6 128228999 128233264 - MGP_129S1SvImJ_P0080110 Ptms protein_coding protein_coding MGP_129S1SvImJ_T0080111.1 MGP_129S1SvImJ_G0031277.1 mouse_genomes_project 6 128229006 128229993 - Ptms protein_coding processed_transcript MGP_129S1SvImJ_T0080112.1 MGP_129S1SvImJ_G0031277.1 mouse_genomes_project 6 128229082 128235449 - Ptms protein_coding processed_transcript MGP_129S1SvImJ_T0080113.1 MGP_129S1SvImJ_G0031277.1 mouse_genomes_project 6 128229367 128230543 - Ptms protein_coding retained_intron MGP_129S1SvImJ_T0080114.1 MGP_129S1SvImJ_G0031277.1 mouse_genomes_project 6 128229959 128230848 - Ptms protein_coding processed_transcript MGP_129S1SvImJ_T0015400.1 MGP_129S1SvImJ_G0013489.1 mouse_genomes_project 6 63989729 63989894 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079971.1 MGP_129S1SvImJ_G0031245.1 mouse_genomes_project 6 126474810 126521213 + MGP_129S1SvImJ_P0079971 Vmn2r19 protein_coding protein_coding MGP_129S1SvImJ_T0002596.1 MGP_129S1SvImJ_G0002497.1 mouse_genomes_project 6 40052312 40052361 + MGP_129S1SvImJ_P0002596 Trbj2-5 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0077874.1 MGP_129S1SvImJ_G0030832.1 mouse_genomes_project 6 65443633 65554020 + MGP_129S1SvImJ_P0077874 Tnip3 protein_coding protein_coding MGP_129S1SvImJ_T0077875.1 MGP_129S1SvImJ_G0030832.1 mouse_genomes_project 6 65511885 65521644 + Tnip3 protein_coding retained_intron MGP_129S1SvImJ_T0077876.1 MGP_129S1SvImJ_G0030832.1 mouse_genomes_project 6 65511897 65513131 + Tnip3 protein_coding processed_transcript MGP_129S1SvImJ_T0077877.1 MGP_129S1SvImJ_G0030832.1 mouse_genomes_project 6 65511928 65515170 + Tnip3 protein_coding retained_intron MGP_129S1SvImJ_T0077878.1 MGP_129S1SvImJ_G0030832.1 mouse_genomes_project 6 65511956 65516583 + Tnip3 protein_coding retained_intron MGP_129S1SvImJ_T0077879.1 MGP_129S1SvImJ_G0030832.1 mouse_genomes_project 6 65519043 65521667 + Tnip3 protein_coding retained_intron MGP_129S1SvImJ_T0015527.1 MGP_129S1SvImJ_G0013616.1 mouse_genomes_project 6 100775617 100776093 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078100.1 MGP_129S1SvImJ_G0030880.1 mouse_genomes_project 6 73136721 73169139 - MGP_129S1SvImJ_P0078100 Elmod3 protein_coding protein_coding MGP_129S1SvImJ_T0078101.1 MGP_129S1SvImJ_G0030880.1 mouse_genomes_project 6 73136733 73169140 - MGP_129S1SvImJ_P0078101 Elmod3 protein_coding protein_coding MGP_129S1SvImJ_T0078102.1 MGP_129S1SvImJ_G0030880.1 mouse_genomes_project 6 73138349 73169192 - MGP_129S1SvImJ_P0078102 Elmod3 protein_coding protein_coding MGP_129S1SvImJ_T0078103.1 MGP_129S1SvImJ_G0030880.1 mouse_genomes_project 6 73140127 73169158 - MGP_129S1SvImJ_P0078103 Elmod3 protein_coding protein_coding MGP_129S1SvImJ_T0078104.1 MGP_129S1SvImJ_G0030880.1 mouse_genomes_project 6 73155264 73165829 - Elmod3 protein_coding processed_transcript MGP_129S1SvImJ_T0078105.1 MGP_129S1SvImJ_G0030880.1 mouse_genomes_project 6 73158430 73169210 - MGP_129S1SvImJ_P0078105 Elmod3 protein_coding protein_coding MGP_129S1SvImJ_T0077719.1 MGP_129S1SvImJ_G0030779.1 mouse_genomes_project 6 56156547 56165054 - MGP_129S1SvImJ_P0077719 Lsm5 protein_coding protein_coding MGP_129S1SvImJ_T0077720.1 MGP_129S1SvImJ_G0030779.1 mouse_genomes_project 6 56156549 56165021 - Lsm5 protein_coding retained_intron MGP_129S1SvImJ_T0077721.1 MGP_129S1SvImJ_G0030779.1 mouse_genomes_project 6 56157031 56165000 - MGP_129S1SvImJ_P0077721 Lsm5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077722.1 MGP_129S1SvImJ_G0030779.1 mouse_genomes_project 6 56157112 56165012 - MGP_129S1SvImJ_P0077722 Lsm5 protein_coding protein_coding MGP_129S1SvImJ_T0002113.1 MGP_129S1SvImJ_G0002026.1 mouse_genomes_project 6 94931175 94933655 + TEC TEC MGP_129S1SvImJ_T0077398.1 MGP_129S1SvImJ_G0030704.1 mouse_genomes_project 6 47599668 47611777 + MGP_129S1SvImJ_P0077398 Gimap8 protein_coding protein_coding MGP_129S1SvImJ_T0005028.1 MGP_129S1SvImJ_G0004307.1 mouse_genomes_project 6 87757925 87768415 - A430078I02Rik antisense antisense MGP_129S1SvImJ_T0005029.1 MGP_129S1SvImJ_G0004307.1 mouse_genomes_project 6 87758455 87768475 - A430078I02Rik antisense antisense MGP_129S1SvImJ_T0015446.1 MGP_129S1SvImJ_G0013535.1 mouse_genomes_project 6 70492615 70493514 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080218.1 MGP_129S1SvImJ_G0031293.1 mouse_genomes_project 6 128573571 128577949 - MGP_129S1SvImJ_P0080218 Cd27 protein_coding protein_coding MGP_129S1SvImJ_T0080219.1 MGP_129S1SvImJ_G0031293.1 mouse_genomes_project 6 128574102 128577933 - MGP_129S1SvImJ_P0080219 Cd27 protein_coding protein_coding MGP_129S1SvImJ_T0080220.1 MGP_129S1SvImJ_G0031293.1 mouse_genomes_project 6 128574173 128577892 - MGP_129S1SvImJ_P0080220 Cd27 protein_coding protein_coding MGP_129S1SvImJ_T0080221.1 MGP_129S1SvImJ_G0031293.1 mouse_genomes_project 6 128574507 128575766 - Cd27 protein_coding retained_intron MGP_129S1SvImJ_T0080222.1 MGP_129S1SvImJ_G0031293.1 mouse_genomes_project 6 128574643 128575626 - Cd27 protein_coding retained_intron MGP_129S1SvImJ_T0080223.1 MGP_129S1SvImJ_G0031293.1 mouse_genomes_project 6 128577046 128577942 - Cd27 protein_coding retained_intron MGP_129S1SvImJ_T0079112.1 MGP_129S1SvImJ_G0031084.1 mouse_genomes_project 6 101677291 101694052 - MGP_129S1SvImJ_P0079112 Prok2 protein_coding protein_coding MGP_129S1SvImJ_T0079113.1 MGP_129S1SvImJ_G0031084.1 mouse_genomes_project 6 101677342 101694013 - MGP_129S1SvImJ_P0079113 Prok2 protein_coding protein_coding MGP_129S1SvImJ_T0079114.1 MGP_129S1SvImJ_G0031084.1 mouse_genomes_project 6 101678012 101694043 - MGP_129S1SvImJ_P0079114 Prok2 protein_coding protein_coding MGP_129S1SvImJ_T0079115.1 MGP_129S1SvImJ_G0031084.1 mouse_genomes_project 6 101689756 101694052 - MGP_129S1SvImJ_P0079115 Prok2 protein_coding protein_coding MGP_129S1SvImJ_T0015396.1 MGP_129S1SvImJ_G0013485.1 mouse_genomes_project 6 62581428 62582696 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101295.1 MGP_129S1SvImJ_G0039362.1 mouse_genomes_project 6 149757503 149757636 - Gm22792 snoRNA snoRNA MGP_129S1SvImJ_T0010828.1 MGP_129S1SvImJ_G0008944.1 mouse_genomes_project 6 128425382 128425445 + Mir7045 miRNA miRNA MGP_129S1SvImJ_T0000158.1 MGP_129S1SvImJ_G0000121.1 mouse_genomes_project 6 68214778 68215281 + MGP_129S1SvImJ_P0000158 Igkv17-127 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0076673.1 MGP_129S1SvImJ_G0030530.1 mouse_genomes_project 6 27561324 27563820 + Smo protein_coding retained_intron MGP_129S1SvImJ_T0076674.1 MGP_129S1SvImJ_G0030530.1 mouse_genomes_project 6 27561510 27587626 + MGP_129S1SvImJ_P0076674 Smo protein_coding protein_coding MGP_129S1SvImJ_T0015660.1 MGP_129S1SvImJ_G0013749.1 mouse_genomes_project 6 140793711 140794888 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002041.1 MGP_129S1SvImJ_G0001954.1 mouse_genomes_project 6 78117134 78118008 - TEC TEC MGP_129S1SvImJ_T0015344.1 MGP_129S1SvImJ_G0013433.1 mouse_genomes_project 6 45571506 45571954 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076473.1 MGP_129S1SvImJ_G0030485.1 mouse_genomes_project 6 20383124 20566861 + MGP_129S1SvImJ_P0076473 Ptprz1 protein_coding protein_coding MGP_129S1SvImJ_T0076474.1 MGP_129S1SvImJ_G0030485.1 mouse_genomes_project 6 20383346 20518607 + MGP_129S1SvImJ_P0076474 Ptprz1 protein_coding protein_coding MGP_129S1SvImJ_T0076475.1 MGP_129S1SvImJ_G0030485.1 mouse_genomes_project 6 20383401 20566562 + MGP_129S1SvImJ_P0076475 Ptprz1 protein_coding protein_coding MGP_129S1SvImJ_T0076476.1 MGP_129S1SvImJ_G0030485.1 mouse_genomes_project 6 20485493 20485928 + Ptprz1 protein_coding retained_intron MGP_129S1SvImJ_T0076477.1 MGP_129S1SvImJ_G0030485.1 mouse_genomes_project 6 20500422 20513326 + Ptprz1 protein_coding retained_intron MGP_129S1SvImJ_T0076478.1 MGP_129S1SvImJ_G0030485.1 mouse_genomes_project 6 20562178 20565410 + Ptprz1 protein_coding retained_intron MGP_129S1SvImJ_T0008624.1 MGP_129S1SvImJ_G0006973.1 mouse_genomes_project 6 56984792 56985351 + Gm44019 lincRNA lincRNA MGP_129S1SvImJ_T0015264.1 MGP_129S1SvImJ_G0013353.1 mouse_genomes_project 6 4755402 4755592 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005041.1 MGP_129S1SvImJ_G0004312.1 mouse_genomes_project 6 89282168 89287785 - Gm26636 antisense antisense MGP_129S1SvImJ_T0010784.1 MGP_129S1SvImJ_G0008900.1 mouse_genomes_project 6 47356434 47356508 + Gm24325 miRNA miRNA MGP_129S1SvImJ_T0010782.1 MGP_129S1SvImJ_G0008898.1 mouse_genomes_project 6 46709247 46709324 - Mir704 miRNA miRNA MGP_129S1SvImJ_T0002101.1 MGP_129S1SvImJ_G0002014.1 mouse_genomes_project 6 92758416 92759010 - TEC TEC MGP_129S1SvImJ_T0015389.1 MGP_129S1SvImJ_G0013478.1 mouse_genomes_project 6 60626092 60626617 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002000.1 MGP_129S1SvImJ_G0001913.1 mouse_genomes_project 6 45177344 45179874 + TEC TEC MGP_129S1SvImJ_T0008685.1 MGP_129S1SvImJ_G0007021.1 mouse_genomes_project 6 92698517 92699632 - Gm44278 lincRNA lincRNA MGP_129S1SvImJ_T0002144.1 MGP_129S1SvImJ_G0002057.1 mouse_genomes_project 6 116235596 116236134 + TEC TEC MGP_129S1SvImJ_T0002010.1 MGP_129S1SvImJ_G0001923.1 mouse_genomes_project 6 52000128 52000740 - TEC TEC MGP_129S1SvImJ_T0000325.1 MGP_129S1SvImJ_G0000267.1 mouse_genomes_project 6 69242634 69243572 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0079879.1 MGP_129S1SvImJ_G0031223.1 mouse_genomes_project 6 125371572 125372183 + MGP_129S1SvImJ_P0079879 protein_coding protein_coding MGP_129S1SvImJ_T0010827.1 MGP_129S1SvImJ_G0008943.1 mouse_genomes_project 6 128021868 128021937 - Mir200c miRNA miRNA MGP_129S1SvImJ_T0002177.1 MGP_129S1SvImJ_G0002089.1 mouse_genomes_project 6 137024525 137024836 + TEC TEC MGP_129S1SvImJ_T0100011.1 MGP_129S1SvImJ_G0038078.1 mouse_genomes_project 6 96895580 96895687 - Gm26501 snRNA snRNA MGP_129S1SvImJ_T0078083.1 MGP_129S1SvImJ_G0030878.1 mouse_genomes_project 6 73071203 73072850 - Sh2d6 protein_coding processed_transcript MGP_129S1SvImJ_T0078084.1 MGP_129S1SvImJ_G0030878.1 mouse_genomes_project 6 73071213 73079817 - MGP_129S1SvImJ_P0078084 Sh2d6 protein_coding protein_coding MGP_129S1SvImJ_T0078085.1 MGP_129S1SvImJ_G0030878.1 mouse_genomes_project 6 73071215 73079906 - MGP_129S1SvImJ_P0078085 Sh2d6 protein_coding protein_coding MGP_129S1SvImJ_T0078086.1 MGP_129S1SvImJ_G0030878.1 mouse_genomes_project 6 73071215 73079929 - MGP_129S1SvImJ_P0078086 Sh2d6 protein_coding protein_coding MGP_129S1SvImJ_T0078087.1 MGP_129S1SvImJ_G0030878.1 mouse_genomes_project 6 73072886 73079256 - Sh2d6 protein_coding processed_transcript MGP_129S1SvImJ_T0078088.1 MGP_129S1SvImJ_G0030878.1 mouse_genomes_project 6 73074968 73080913 - Sh2d6 protein_coding retained_intron MGP_129S1SvImJ_T0079773.1 MGP_129S1SvImJ_G0031201.1 mouse_genomes_project 6 123175860 123176929 + MGP_129S1SvImJ_P0079773 D330020A13Rik protein_coding protein_coding MGP_129S1SvImJ_T0080451.1 MGP_129S1SvImJ_G0031350.1 mouse_genomes_project 6 133181555 133185892 + MGP_129S1SvImJ_P0080451 Tmem52b protein_coding protein_coding MGP_129S1SvImJ_T0080452.1 MGP_129S1SvImJ_G0031350.1 mouse_genomes_project 6 133184303 133185981 + Tmem52b protein_coding retained_intron MGP_129S1SvImJ_T0080453.1 MGP_129S1SvImJ_G0031350.1 mouse_genomes_project 6 133185047 133186031 + Tmem52b protein_coding retained_intron MGP_129S1SvImJ_T0008559.1 MGP_129S1SvImJ_G0006928.1 mouse_genomes_project 6 29600141 29611100 + lincRNA lincRNA MGP_129S1SvImJ_T0101289.1 MGP_129S1SvImJ_G0039356.1 mouse_genomes_project 6 128519052 128519377 - Scarna10 snoRNA snoRNA MGP_129S1SvImJ_T0008748.1 MGP_129S1SvImJ_G0007074.1 mouse_genomes_project 6 132498236 132501211 - Gm44067 lincRNA lincRNA MGP_129S1SvImJ_T0078918.1 MGP_129S1SvImJ_G0031046.1 mouse_genomes_project 6 93062009 93073357 - MGP_129S1SvImJ_P0078918 Chchd4 protein_coding protein_coding MGP_129S1SvImJ_T0078919.1 MGP_129S1SvImJ_G0031046.1 mouse_genomes_project 6 93071406 93073260 - Chchd4 protein_coding retained_intron MGP_129S1SvImJ_T0079414.1 MGP_129S1SvImJ_G0031141.1 mouse_genomes_project 6 116975916 117061135 + MGP_129S1SvImJ_P0079414 Hrh1 protein_coding protein_coding MGP_129S1SvImJ_T0079415.1 MGP_129S1SvImJ_G0031141.1 mouse_genomes_project 6 116976066 117057703 + MGP_129S1SvImJ_P0079415 Hrh1 protein_coding protein_coding MGP_129S1SvImJ_T0079416.1 MGP_129S1SvImJ_G0031141.1 mouse_genomes_project 6 116981645 117060307 + MGP_129S1SvImJ_P0079416 Hrh1 protein_coding protein_coding MGP_129S1SvImJ_T0079417.1 MGP_129S1SvImJ_G0031141.1 mouse_genomes_project 6 116981801 117060241 + MGP_129S1SvImJ_P0079417 Hrh1 protein_coding protein_coding MGP_129S1SvImJ_T0079418.1 MGP_129S1SvImJ_G0031141.1 mouse_genomes_project 6 117036621 117060305 + MGP_129S1SvImJ_P0079418 Hrh1 protein_coding protein_coding MGP_129S1SvImJ_T0002001.1 MGP_129S1SvImJ_G0001914.1 mouse_genomes_project 6 45256398 45258873 + TEC TEC MGP_129S1SvImJ_T0076591.1 MGP_129S1SvImJ_G0030516.1 mouse_genomes_project 6 26970881 26986791 - MGP_129S1SvImJ_P0076591 Impdh1 protein_coding protein_coding MGP_129S1SvImJ_T0076592.1 MGP_129S1SvImJ_G0030516.1 mouse_genomes_project 6 26970884 26982757 - MGP_129S1SvImJ_P0076592 Impdh1 protein_coding protein_coding MGP_129S1SvImJ_T0076593.1 MGP_129S1SvImJ_G0030516.1 mouse_genomes_project 6 26970884 26986824 - MGP_129S1SvImJ_P0076593 Impdh1 protein_coding protein_coding MGP_129S1SvImJ_T0076594.1 MGP_129S1SvImJ_G0030516.1 mouse_genomes_project 6 26970884 26982709 - MGP_129S1SvImJ_P0076594 Impdh1 protein_coding protein_coding MGP_129S1SvImJ_T0076595.1 MGP_129S1SvImJ_G0030516.1 mouse_genomes_project 6 26970885 26986802 - MGP_129S1SvImJ_P0076595 Impdh1 protein_coding protein_coding MGP_129S1SvImJ_T0076596.1 MGP_129S1SvImJ_G0030516.1 mouse_genomes_project 6 26970892 26973866 - MGP_129S1SvImJ_P0076596 Impdh1 protein_coding protein_coding MGP_129S1SvImJ_T0076597.1 MGP_129S1SvImJ_G0030516.1 mouse_genomes_project 6 26975007 26976885 - Impdh1 protein_coding retained_intron MGP_129S1SvImJ_T0076598.1 MGP_129S1SvImJ_G0030516.1 mouse_genomes_project 6 26975552 26986737 - MGP_129S1SvImJ_P0076598 Impdh1 protein_coding protein_coding MGP_129S1SvImJ_T0076599.1 MGP_129S1SvImJ_G0030516.1 mouse_genomes_project 6 26977269 26980053 - Impdh1 protein_coding retained_intron MGP_129S1SvImJ_T0076600.1 MGP_129S1SvImJ_G0030516.1 mouse_genomes_project 6 26977435 26986389 - MGP_129S1SvImJ_P0076600 Impdh1 protein_coding protein_coding MGP_129S1SvImJ_T0015410.1 MGP_129S1SvImJ_G0013499.1 mouse_genomes_project 6 65196012 65197207 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077753.1 MGP_129S1SvImJ_G0030792.1 mouse_genomes_project 6 56711231 56712134 + MGP_129S1SvImJ_P0077753 Vmn1r13 protein_coding protein_coding MGP_129S1SvImJ_T0008729.1 MGP_129S1SvImJ_G0007055.1 mouse_genomes_project 6 121006362 121008712 + Gm30557 lincRNA lincRNA MGP_129S1SvImJ_T0079288.1 MGP_129S1SvImJ_G0031117.1 mouse_genomes_project 6 115835376 115847010 + MGP_129S1SvImJ_P0079288 Ogg1 protein_coding protein_coding MGP_129S1SvImJ_T0079289.1 MGP_129S1SvImJ_G0031117.1 mouse_genomes_project 6 115835389 115839090 + Ogg1 protein_coding retained_intron MGP_129S1SvImJ_T0079290.1 MGP_129S1SvImJ_G0031117.1 mouse_genomes_project 6 115835403 115847006 + MGP_129S1SvImJ_P0079290 Ogg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079291.1 MGP_129S1SvImJ_G0031117.1 mouse_genomes_project 6 115835412 115839597 + Ogg1 protein_coding processed_transcript MGP_129S1SvImJ_T0079292.1 MGP_129S1SvImJ_G0031117.1 mouse_genomes_project 6 115835417 115845316 + MGP_129S1SvImJ_P0079292 Ogg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079293.1 MGP_129S1SvImJ_G0031117.1 mouse_genomes_project 6 115835515 115839221 + Ogg1 protein_coding retained_intron MGP_129S1SvImJ_T0079294.1 MGP_129S1SvImJ_G0031117.1 mouse_genomes_project 6 115844648 115847890 + Ogg1 protein_coding retained_intron MGP_129S1SvImJ_T0077169.1 MGP_129S1SvImJ_G0030636.1 mouse_genomes_project 6 40373269 40378899 + MGP_129S1SvImJ_P0077169 Pip protein_coding protein_coding MGP_129S1SvImJ_T0077170.1 MGP_129S1SvImJ_G0030636.1 mouse_genomes_project 6 40373302 40378791 + MGP_129S1SvImJ_P0077170 Pip protein_coding protein_coding MGP_129S1SvImJ_T0077171.1 MGP_129S1SvImJ_G0030636.1 mouse_genomes_project 6 40373319 40378418 + MGP_129S1SvImJ_P0077171 Pip protein_coding protein_coding MGP_129S1SvImJ_T0002123.1 MGP_129S1SvImJ_G0002036.1 mouse_genomes_project 6 102842719 102844784 + TEC TEC MGP_129S1SvImJ_T0004956.1 MGP_129S1SvImJ_G0004257.1 mouse_genomes_project 6 37802482 37803498 + Gm10244 antisense antisense MGP_129S1SvImJ_T0004957.1 MGP_129S1SvImJ_G0004257.1 mouse_genomes_project 6 37802973 37803890 + Gm10244 antisense antisense MGP_129S1SvImJ_T0080379.1 MGP_129S1SvImJ_G0031329.1 mouse_genomes_project 6 132164653 132169271 - BC048546 protein_coding retained_intron MGP_129S1SvImJ_T0080380.1 MGP_129S1SvImJ_G0031329.1 mouse_genomes_project 6 132164659 132208634 - MGP_129S1SvImJ_P0080380 BC048546 protein_coding protein_coding MGP_129S1SvImJ_T0080381.1 MGP_129S1SvImJ_G0031329.1 mouse_genomes_project 6 132174271 132179087 - BC048546 protein_coding retained_intron MGP_129S1SvImJ_T0080382.1 MGP_129S1SvImJ_G0031329.1 mouse_genomes_project 6 132183975 132185218 - BC048546 protein_coding retained_intron MGP_129S1SvImJ_T0080383.1 MGP_129S1SvImJ_G0031329.1 mouse_genomes_project 6 132201200 132203767 - BC048546 protein_coding retained_intron MGP_129S1SvImJ_T0015456.1 MGP_129S1SvImJ_G0013545.1 mouse_genomes_project 6 72176989 72177552 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008738.1 MGP_129S1SvImJ_G0007064.1 mouse_genomes_project 6 129708499 129753177 - Gm10415 lincRNA lincRNA MGP_129S1SvImJ_T0079642.1 MGP_129S1SvImJ_G0031182.1 mouse_genomes_project 6 120742390 120830497 + MGP_129S1SvImJ_P0079642 Rasgef1a protein_coding protein_coding MGP_129S1SvImJ_T0079643.1 MGP_129S1SvImJ_G0031182.1 mouse_genomes_project 6 120805432 120829451 + MGP_129S1SvImJ_P0079643 Rasgef1a protein_coding protein_coding MGP_129S1SvImJ_T0079644.1 MGP_129S1SvImJ_G0031182.1 mouse_genomes_project 6 120805432 120829522 + MGP_129S1SvImJ_P0079644 Rasgef1a protein_coding protein_coding MGP_129S1SvImJ_T0078551.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87685449 87717222 + MGP_129S1SvImJ_P0078551 Tia1 protein_coding protein_coding MGP_129S1SvImJ_T0078552.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87685449 87715018 + MGP_129S1SvImJ_P0078552 Tia1 protein_coding protein_coding MGP_129S1SvImJ_T0078553.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87685465 87686399 + Tia1 protein_coding retained_intron MGP_129S1SvImJ_T0078554.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87685512 87688351 + Tia1 protein_coding processed_transcript MGP_129S1SvImJ_T0078555.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87685521 87701948 + Tia1 protein_coding retained_intron MGP_129S1SvImJ_T0078556.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87685526 87703755 + Tia1 protein_coding processed_transcript MGP_129S1SvImJ_T0078557.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87685526 87711591 + MGP_129S1SvImJ_P0078557 Tia1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078558.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87685534 87714589 + Tia1 protein_coding retained_intron MGP_129S1SvImJ_T0078559.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87685543 87716002 + MGP_129S1SvImJ_P0078559 Tia1 protein_coding protein_coding MGP_129S1SvImJ_T0078560.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87685544 87714588 + MGP_129S1SvImJ_P0078560 Tia1 protein_coding protein_coding MGP_129S1SvImJ_T0078561.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87685547 87711646 + MGP_129S1SvImJ_P0078561 Tia1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078562.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87685553 87707700 + Tia1 protein_coding processed_transcript MGP_129S1SvImJ_T0078563.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87685555 87717044 + MGP_129S1SvImJ_P0078563 Tia1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078564.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87685566 87703801 + Tia1 protein_coding retained_intron MGP_129S1SvImJ_T0078565.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87685566 87715997 + MGP_129S1SvImJ_P0078565 Tia1 protein_coding protein_coding MGP_129S1SvImJ_T0078566.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87685590 87703836 + Tia1 protein_coding retained_intron MGP_129S1SvImJ_T0078567.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87685703 87709123 + Tia1 protein_coding retained_intron MGP_129S1SvImJ_T0078568.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87696121 87705956 + Tia1 protein_coding retained_intron MGP_129S1SvImJ_T0078569.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87699747 87702411 + Tia1 protein_coding retained_intron MGP_129S1SvImJ_T0078570.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87703165 87707452 + Tia1 protein_coding processed_transcript MGP_129S1SvImJ_T0078571.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87703357 87709347 + Tia1 protein_coding processed_transcript MGP_129S1SvImJ_T0078572.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87703857 87707686 + Tia1 protein_coding retained_intron MGP_129S1SvImJ_T0078573.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87703889 87708260 + Tia1 protein_coding retained_intron MGP_129S1SvImJ_T0078574.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87704215 87711608 + Tia1 protein_coding retained_intron MGP_129S1SvImJ_T0078575.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87705941 87708471 + Tia1 protein_coding retained_intron MGP_129S1SvImJ_T0078576.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87707665 87708831 + Tia1 protein_coding retained_intron MGP_129S1SvImJ_T0078577.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87708837 87709537 + Tia1 protein_coding retained_intron MGP_129S1SvImJ_T0078578.1 MGP_129S1SvImJ_G0030975.1 mouse_genomes_project 6 87709312 87714120 + MGP_129S1SvImJ_P0078578 Tia1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077416.1 MGP_129S1SvImJ_G0030710.1 mouse_genomes_project 6 47696450 47701184 + MGP_129S1SvImJ_P0077416 Gimap1 protein_coding protein_coding MGP_129S1SvImJ_T0077418.1 MGP_129S1SvImJ_G0030710.1 mouse_genomes_project 6 47696469 47700115 + MGP_129S1SvImJ_P0077418 Gimap1 protein_coding protein_coding MGP_129S1SvImJ_T0077419.1 MGP_129S1SvImJ_G0030710.1 mouse_genomes_project 6 47696472 47701188 + MGP_129S1SvImJ_P0077419 Gimap1 protein_coding protein_coding MGP_129S1SvImJ_T0077420.1 MGP_129S1SvImJ_G0030710.1 mouse_genomes_project 6 47696483 47697427 + Gimap1 protein_coding retained_intron MGP_129S1SvImJ_T0077421.1 MGP_129S1SvImJ_G0030710.1 mouse_genomes_project 6 47696503 47699188 + Gimap1 protein_coding retained_intron MGP_129S1SvImJ_T0077422.1 MGP_129S1SvImJ_G0030710.1 mouse_genomes_project 6 47699573 47701189 + Gimap1 protein_coding retained_intron MGP_129S1SvImJ_T0080082.1 MGP_129S1SvImJ_G0031271.1 mouse_genomes_project 6 128136333 128139451 + MGP_129S1SvImJ_P0080082 Cdca3 protein_coding protein_coding MGP_129S1SvImJ_T0080083.1 MGP_129S1SvImJ_G0031271.1 mouse_genomes_project 6 128136474 128140488 + MGP_129S1SvImJ_P0080083 Cdca3 protein_coding protein_coding MGP_129S1SvImJ_T0080084.1 MGP_129S1SvImJ_G0031271.1 mouse_genomes_project 6 128137003 128139372 + MGP_129S1SvImJ_P0080084 Cdca3 protein_coding protein_coding MGP_129S1SvImJ_T0080085.1 MGP_129S1SvImJ_G0031271.1 mouse_genomes_project 6 128137021 128140319 + Cdca3 protein_coding retained_intron MGP_129S1SvImJ_T0080086.1 MGP_129S1SvImJ_G0031271.1 mouse_genomes_project 6 128137149 128138819 + Cdca3 protein_coding retained_intron MGP_129S1SvImJ_T0080087.1 MGP_129S1SvImJ_G0031271.1 mouse_genomes_project 6 128137161 128139226 + MGP_129S1SvImJ_P0080087 Cdca3 protein_coding protein_coding MGP_129S1SvImJ_T0100021.1 MGP_129S1SvImJ_G0038088.1 mouse_genomes_project 6 115541972 115542078 + Gm22591 snRNA snRNA MGP_129S1SvImJ_T0001936.1 MGP_129S1SvImJ_G0001849.1 mouse_genomes_project 6 1764585 1764905 + TEC TEC MGP_129S1SvImJ_T0080092.1 MGP_129S1SvImJ_G0031273.1 mouse_genomes_project 6 128150162 128168351 - MGP_129S1SvImJ_P0080092 P3h3 protein_coding protein_coding MGP_129S1SvImJ_T0080093.1 MGP_129S1SvImJ_G0031273.1 mouse_genomes_project 6 128150279 128168328 - MGP_129S1SvImJ_P0080093 P3h3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080094.1 MGP_129S1SvImJ_G0031273.1 mouse_genomes_project 6 128150567 128151685 - P3h3 protein_coding retained_intron MGP_129S1SvImJ_T0080095.1 MGP_129S1SvImJ_G0031273.1 mouse_genomes_project 6 128155958 128161544 - P3h3 protein_coding retained_intron MGP_129S1SvImJ_T0080096.1 MGP_129S1SvImJ_G0031273.1 mouse_genomes_project 6 128156606 128165523 - P3h3 protein_coding retained_intron MGP_129S1SvImJ_T0080097.1 MGP_129S1SvImJ_G0031273.1 mouse_genomes_project 6 128156648 128165426 - P3h3 protein_coding retained_intron MGP_129S1SvImJ_T0080098.1 MGP_129S1SvImJ_G0031273.1 mouse_genomes_project 6 128164994 128165769 - P3h3 protein_coding retained_intron MGP_129S1SvImJ_T0002063.1 MGP_129S1SvImJ_G0001976.1 mouse_genomes_project 6 84318820 84321613 - TEC TEC MGP_129S1SvImJ_T0077382.1 MGP_129S1SvImJ_G0030700.1 mouse_genomes_project 6 47545671 47550870 + MGP_129S1SvImJ_P0077382 Repin1 protein_coding protein_coding MGP_129S1SvImJ_T0077383.1 MGP_129S1SvImJ_G0030700.1 mouse_genomes_project 6 47545671 47550870 + MGP_129S1SvImJ_P0077383 Repin1 protein_coding protein_coding MGP_129S1SvImJ_T0077384.1 MGP_129S1SvImJ_G0030700.1 mouse_genomes_project 6 47545671 47549176 + MGP_129S1SvImJ_P0077384 Repin1 protein_coding protein_coding MGP_129S1SvImJ_T0077385.1 MGP_129S1SvImJ_G0030700.1 mouse_genomes_project 6 47545679 47550871 + MGP_129S1SvImJ_P0077385 Repin1 protein_coding protein_coding MGP_129S1SvImJ_T0077386.1 MGP_129S1SvImJ_G0030700.1 mouse_genomes_project 6 47545688 47550870 + MGP_129S1SvImJ_P0077386 Repin1 protein_coding protein_coding MGP_129S1SvImJ_T0077387.1 MGP_129S1SvImJ_G0030700.1 mouse_genomes_project 6 47545728 47547122 + Repin1 protein_coding retained_intron MGP_129S1SvImJ_T0077390.1 MGP_129S1SvImJ_G0030700.1 mouse_genomes_project 6 47546107 47548412 + Repin1 protein_coding retained_intron MGP_129S1SvImJ_T0008668.1 MGP_129S1SvImJ_G0007009.1 mouse_genomes_project 6 88044394 88048002 + Gm44036 lincRNA lincRNA MGP_129S1SvImJ_T0002024.1 MGP_129S1SvImJ_G0001937.1 mouse_genomes_project 6 71744407 71747262 + TEC TEC MGP_129S1SvImJ_T0000339.1 MGP_129S1SvImJ_G0000281.1 mouse_genomes_project 6 70215329 70215896 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0015463.1 MGP_129S1SvImJ_G0013552.1 mouse_genomes_project 6 74141781 74142205 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099993.1 MGP_129S1SvImJ_G0038060.1 mouse_genomes_project 6 37627390 37627489 - Gm26008 snRNA snRNA MGP_129S1SvImJ_T0101260.1 MGP_129S1SvImJ_G0039327.1 mouse_genomes_project 6 73762380 73762576 - Gm24533 snoRNA snoRNA MGP_129S1SvImJ_T0015692.1 MGP_129S1SvImJ_G0013781.1 mouse_genomes_project 6 154547210 154548074 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080873.1 MGP_129S1SvImJ_G0031469.1 mouse_genomes_project 6 147564100 147583117 + MGP_129S1SvImJ_P0080873 Cmas protein_coding protein_coding MGP_129S1SvImJ_T0080874.1 MGP_129S1SvImJ_G0031469.1 mouse_genomes_project 6 147564168 147577993 + MGP_129S1SvImJ_P0080874 Cmas protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080875.1 MGP_129S1SvImJ_G0031469.1 mouse_genomes_project 6 147564178 147582067 + MGP_129S1SvImJ_P0080875 Cmas protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080876.1 MGP_129S1SvImJ_G0031469.1 mouse_genomes_project 6 147564189 147579623 + MGP_129S1SvImJ_P0080876 Cmas protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080877.1 MGP_129S1SvImJ_G0031469.1 mouse_genomes_project 6 147577368 147578737 + Cmas protein_coding retained_intron MGP_129S1SvImJ_T0099982.1 MGP_129S1SvImJ_G0038049.1 mouse_genomes_project 6 3843991 3844153 - Gm22155 snRNA snRNA MGP_129S1SvImJ_T0015671.1 MGP_129S1SvImJ_G0013760.1 mouse_genomes_project 6 145528410 145528616 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076148.1 MGP_129S1SvImJ_G0030424.1 mouse_genomes_project 6 727388 731031 + MGP_129S1SvImJ_P0076148 Gngt1 protein_coding protein_coding MGP_129S1SvImJ_T0076149.1 MGP_129S1SvImJ_G0030424.1 mouse_genomes_project 6 727393 730497 + Gngt1 protein_coding retained_intron MGP_129S1SvImJ_T0004948.1 MGP_129S1SvImJ_G0004250.1 mouse_genomes_project 6 32360477 32395444 + Gm14546 antisense antisense MGP_129S1SvImJ_T0078203.1 MGP_129S1SvImJ_G0030907.1 mouse_genomes_project 6 83903319 83930771 - MGP_129S1SvImJ_P0078203 Sema4f protein_coding protein_coding MGP_129S1SvImJ_T0078204.1 MGP_129S1SvImJ_G0030907.1 mouse_genomes_project 6 83905522 83909025 - Sema4f protein_coding processed_transcript MGP_129S1SvImJ_T0078205.1 MGP_129S1SvImJ_G0030907.1 mouse_genomes_project 6 83907660 83930771 - Sema4f protein_coding retained_intron MGP_129S1SvImJ_T0078206.1 MGP_129S1SvImJ_G0030907.1 mouse_genomes_project 6 83910039 83930547 - MGP_129S1SvImJ_P0078206 Sema4f protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0004990.1 MGP_129S1SvImJ_G0004282.1 mouse_genomes_project 6 65702575 65713279 - Gm16838 antisense antisense MGP_129S1SvImJ_T0080321.1 MGP_129S1SvImJ_G0031318.1 mouse_genomes_project 6 131511672 131590270 - MGP_129S1SvImJ_P0080321 Tspan9 protein_coding protein_coding MGP_129S1SvImJ_T0080322.1 MGP_129S1SvImJ_G0031318.1 mouse_genomes_project 6 131515533 131517116 - Tspan9 protein_coding retained_intron MGP_129S1SvImJ_T0080323.1 MGP_129S1SvImJ_G0031318.1 mouse_genomes_project 6 131516060 131590774 - MGP_129S1SvImJ_P0080323 Tspan9 protein_coding protein_coding MGP_129S1SvImJ_T0080324.1 MGP_129S1SvImJ_G0031318.1 mouse_genomes_project 6 131516729 131708211 - MGP_129S1SvImJ_P0080324 Tspan9 protein_coding protein_coding MGP_129S1SvImJ_T0080325.1 MGP_129S1SvImJ_G0031318.1 mouse_genomes_project 6 131516735 131705397 - MGP_129S1SvImJ_P0080325 Tspan9 protein_coding protein_coding MGP_129S1SvImJ_T0080326.1 MGP_129S1SvImJ_G0031318.1 mouse_genomes_project 6 131517379 131708204 - MGP_129S1SvImJ_P0080326 Tspan9 protein_coding protein_coding MGP_129S1SvImJ_T0080327.1 MGP_129S1SvImJ_G0031318.1 mouse_genomes_project 6 131517464 131687760 - MGP_129S1SvImJ_P0080327 Tspan9 protein_coding protein_coding MGP_129S1SvImJ_T0080328.1 MGP_129S1SvImJ_G0031318.1 mouse_genomes_project 6 131639670 131708245 - Tspan9 protein_coding processed_transcript MGP_129S1SvImJ_T0098619.1 MGP_129S1SvImJ_G0036704.1 mouse_genomes_project 6 59976882 59977001 + n-R5s162 rRNA rRNA MGP_129S1SvImJ_T0077761.1 MGP_129S1SvImJ_G0030800.1 mouse_genomes_project 6 57015641 57048785 - MGP_129S1SvImJ_P0077761 Ppm1k protein_coding protein_coding MGP_129S1SvImJ_T0077762.1 MGP_129S1SvImJ_G0030800.1 mouse_genomes_project 6 57022575 57024565 - MGP_129S1SvImJ_P0077762 Ppm1k protein_coding protein_coding MGP_129S1SvImJ_T0077763.1 MGP_129S1SvImJ_G0030800.1 mouse_genomes_project 6 57047793 57048828 - Ppm1k protein_coding processed_transcript MGP_129S1SvImJ_T0077288.1 MGP_129S1SvImJ_G0030680.1 mouse_genomes_project 6 45941455 45941797 + MGP_129S1SvImJ_P0077288 Gm17611 protein_coding protein_coding MGP_129S1SvImJ_T0015448.1 MGP_129S1SvImJ_G0013537.1 mouse_genomes_project 6 70638756 70640100 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004945.1 MGP_129S1SvImJ_G0004247.1 mouse_genomes_project 6 30511543 30516047 + Plxna4os1 antisense antisense MGP_129S1SvImJ_T0015550.1 MGP_129S1SvImJ_G0013639.1 mouse_genomes_project 6 111509676 111510261 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011645.1 MGP_129S1SvImJ_G0009761.1 mouse_genomes_project 6 14954511 14954695 + Gm27960 misc_RNA misc_RNA MGP_129S1SvImJ_T0015274.1 MGP_129S1SvImJ_G0013363.1 mouse_genomes_project 6 9911317 9912303 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077247.1 MGP_129S1SvImJ_G0030661.1 mouse_genomes_project 6 41297461 41298418 + MGP_129S1SvImJ_P0077247 Olfr38 protein_coding protein_coding MGP_129S1SvImJ_T0080038.1 MGP_129S1SvImJ_G0031264.1 mouse_genomes_project 6 128043814 128060651 - MGP_129S1SvImJ_P0080038 Atn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080354.1 MGP_129S1SvImJ_G0031324.1 mouse_genomes_project 6 131976588 132016869 + MGP_129S1SvImJ_P0080354 protein_coding protein_coding MGP_129S1SvImJ_T0002516.1 MGP_129S1SvImJ_G0002424.1 mouse_genomes_project 6 40055650 40057218 + MGP_129S1SvImJ_P0002516 TR_C_gene TR_C_gene MGP_129S1SvImJ_T0076264.1 MGP_129S1SvImJ_G0030451.1 mouse_genomes_project 6 5449018 5528356 + MGP_129S1SvImJ_P0076264 Glcci1 protein_coding protein_coding MGP_129S1SvImJ_T0076265.1 MGP_129S1SvImJ_G0030451.1 mouse_genomes_project 6 5450355 5509758 + MGP_129S1SvImJ_P0076265 Glcci1 protein_coding protein_coding MGP_129S1SvImJ_T0076266.1 MGP_129S1SvImJ_G0030451.1 mouse_genomes_project 6 5458632 5524427 + MGP_129S1SvImJ_P0076266 Glcci1 protein_coding protein_coding MGP_129S1SvImJ_T0076267.1 MGP_129S1SvImJ_G0030451.1 mouse_genomes_project 6 5475302 5524876 + MGP_129S1SvImJ_P0076267 Glcci1 protein_coding protein_coding MGP_129S1SvImJ_T0076268.1 MGP_129S1SvImJ_G0030451.1 mouse_genomes_project 6 5509815 5522438 + Glcci1 protein_coding processed_transcript MGP_129S1SvImJ_T0010799.1 MGP_129S1SvImJ_G0008915.1 mouse_genomes_project 6 84406746 84406853 - Mir6374 miRNA miRNA MGP_129S1SvImJ_T0077137.1 MGP_129S1SvImJ_G0030617.1 mouse_genomes_project 6 39353275 39362873 - MGP_129S1SvImJ_P0077137 Moxd2 protein_coding protein_coding MGP_129S1SvImJ_T0004941.1 MGP_129S1SvImJ_G0004244.1 mouse_genomes_project 6 28637447 28638343 - Gm44296 antisense antisense MGP_129S1SvImJ_T0005025.1 MGP_129S1SvImJ_G0004304.1 mouse_genomes_project 6 87207486 87253118 + Gm19265 antisense antisense MGP_129S1SvImJ_T0011695.1 MGP_129S1SvImJ_G0009811.1 mouse_genomes_project 6 147027333 147027622 - Gm25430 misc_RNA misc_RNA MGP_129S1SvImJ_T0008745.1 MGP_129S1SvImJ_G0007071.1 mouse_genomes_project 6 132214116 132216510 - Gm44009 lincRNA lincRNA MGP_129S1SvImJ_T0002139.1 MGP_129S1SvImJ_G0002052.1 mouse_genomes_project 6 114728477 114731000 + TEC TEC MGP_129S1SvImJ_T0008531.1 MGP_129S1SvImJ_G0006910.1 mouse_genomes_project 6 16584900 16622850 - 4930524B17Rik lincRNA lincRNA MGP_129S1SvImJ_T0015387.1 MGP_129S1SvImJ_G0013476.1 mouse_genomes_project 6 59636514 59637472 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011656.1 MGP_129S1SvImJ_G0009772.1 mouse_genomes_project 6 44800796 44801100 + Gm22839 misc_RNA misc_RNA MGP_129S1SvImJ_T0015424.1 MGP_129S1SvImJ_G0013513.1 mouse_genomes_project 6 66978096 66978483 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002710.1 MGP_129S1SvImJ_G0002591.1 mouse_genomes_project 6 39675695 39676400 + MGP_129S1SvImJ_P0002710 Trbv20 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0079560.1 MGP_129S1SvImJ_G0031165.1 mouse_genomes_project 6 118947775 118994293 + MGP_129S1SvImJ_P0079560 Zfand4 protein_coding protein_coding MGP_129S1SvImJ_T0080500.1 MGP_129S1SvImJ_G0031368.1 mouse_genomes_project 6 135298905 135327160 - MGP_129S1SvImJ_P0080500 Ybx3 protein_coding protein_coding MGP_129S1SvImJ_T0080501.1 MGP_129S1SvImJ_G0031368.1 mouse_genomes_project 6 135298905 135327198 - MGP_129S1SvImJ_P0080501 Ybx3 protein_coding protein_coding MGP_129S1SvImJ_T0080502.1 MGP_129S1SvImJ_G0031368.1 mouse_genomes_project 6 135299140 135315023 - Ybx3 protein_coding processed_transcript MGP_129S1SvImJ_T0080503.1 MGP_129S1SvImJ_G0031368.1 mouse_genomes_project 6 135299150 135304363 - Ybx3 protein_coding retained_intron MGP_129S1SvImJ_T0080504.1 MGP_129S1SvImJ_G0031368.1 mouse_genomes_project 6 135312943 135315284 - Ybx3 protein_coding processed_transcript MGP_129S1SvImJ_T0015316.1 MGP_129S1SvImJ_G0013405.1 mouse_genomes_project 6 32924138 32924834 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018317.1 MGP_129S1SvImJ_G0015639.1 mouse_genomes_project 6 67006770 67053638 + E230016M11Rik processed_transcript bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0018318.1 MGP_129S1SvImJ_G0015639.1 mouse_genomes_project 6 67006776 67036745 + E230016M11Rik processed_transcript bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0018319.1 MGP_129S1SvImJ_G0015639.1 mouse_genomes_project 6 67006826 67053123 + E230016M11Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018320.1 MGP_129S1SvImJ_G0015639.1 mouse_genomes_project 6 67049743 67053081 + E230016M11Rik processed_transcript retained_intron MGP_129S1SvImJ_T0102645.1 MGP_129S1SvImJ_G0040478.1 mouse_genomes_project 6 134187168 134196816 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0080574.1 MGP_129S1SvImJ_G0031408.1 mouse_genomes_project 6 139122243 139153141 + MGP_129S1SvImJ_P0080574 Crebl2 protein_coding protein_coding MGP_129S1SvImJ_T0080575.1 MGP_129S1SvImJ_G0031408.1 mouse_genomes_project 6 139122317 139144223 + Crebl2 protein_coding retained_intron MGP_129S1SvImJ_T0080576.1 MGP_129S1SvImJ_G0031408.1 mouse_genomes_project 6 139122344 139150376 + MGP_129S1SvImJ_P0080576 Crebl2 protein_coding protein_coding MGP_129S1SvImJ_T0080577.1 MGP_129S1SvImJ_G0031408.1 mouse_genomes_project 6 139144843 139148267 + Crebl2 protein_coding retained_intron MGP_129S1SvImJ_T0004968.1 MGP_129S1SvImJ_G0004267.1 mouse_genomes_project 6 47969331 47982332 - 4930563H07Rik antisense antisense MGP_129S1SvImJ_T0077556.1 MGP_129S1SvImJ_G0030742.1 mouse_genomes_project 6 51414953 51418306 + MGP_129S1SvImJ_P0077556 5730596B20Rik protein_coding protein_coding MGP_129S1SvImJ_T0005052.1 MGP_129S1SvImJ_G0004319.1 mouse_genomes_project 6 90755589 90778745 + Gm26811 antisense antisense MGP_129S1SvImJ_T0015624.1 MGP_129S1SvImJ_G0013713.1 mouse_genomes_project 6 131893285 131893682 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008648.1 MGP_129S1SvImJ_G0006995.1 mouse_genomes_project 6 82625866 82665451 - Gm43902 lincRNA lincRNA MGP_129S1SvImJ_T0100005.1 MGP_129S1SvImJ_G0038072.1 mouse_genomes_project 6 71488908 71489063 - Gm23485 snRNA snRNA MGP_129S1SvImJ_T0076224.1 MGP_129S1SvImJ_G0030439.1 mouse_genomes_project 6 3469105 3494927 - MGP_129S1SvImJ_P0076224 Shfm1 protein_coding protein_coding MGP_129S1SvImJ_T0076225.1 MGP_129S1SvImJ_G0030439.1 mouse_genomes_project 6 3492711 3494932 - Shfm1 protein_coding retained_intron MGP_129S1SvImJ_T0076320.1 MGP_129S1SvImJ_G0030460.1 mouse_genomes_project 6 10704272 10759819 - MGP_129S1SvImJ_P0076320 Bmt2 protein_coding protein_coding MGP_129S1SvImJ_T0076321.1 MGP_129S1SvImJ_G0030460.1 mouse_genomes_project 6 10705404 10759791 - MGP_129S1SvImJ_P0076321 Bmt2 protein_coding protein_coding MGP_129S1SvImJ_T0077093.1 MGP_129S1SvImJ_G0030603.1 mouse_genomes_project 6 38229207 38239888 - MGP_129S1SvImJ_P0077093 protein_coding protein_coding MGP_129S1SvImJ_T0077452.1 MGP_129S1SvImJ_G0030718.1 mouse_genomes_project 6 47969576 47974438 + MGP_129S1SvImJ_P0077452 Svs1 protein_coding protein_coding MGP_129S1SvImJ_T0077088.1 MGP_129S1SvImJ_G0030602.1 mouse_genomes_project 6 38009233 38138752 - MGP_129S1SvImJ_P0077088 Braf protein_coding protein_coding MGP_129S1SvImJ_T0077089.1 MGP_129S1SvImJ_G0030602.1 mouse_genomes_project 6 38020106 38138482 - MGP_129S1SvImJ_P0077089 Braf protein_coding protein_coding MGP_129S1SvImJ_T0077090.1 MGP_129S1SvImJ_G0030602.1 mouse_genomes_project 6 38046872 38052367 - Braf protein_coding retained_intron MGP_129S1SvImJ_T0077091.1 MGP_129S1SvImJ_G0030602.1 mouse_genomes_project 6 38047887 38050835 - Braf protein_coding retained_intron MGP_129S1SvImJ_T0077092.1 MGP_129S1SvImJ_G0030602.1 mouse_genomes_project 6 38059159 38072817 - Braf protein_coding retained_intron MGP_129S1SvImJ_T0002197.1 MGP_129S1SvImJ_G0002109.1 mouse_genomes_project 6 146195426 146198970 + TEC TEC MGP_129S1SvImJ_T0015654.1 MGP_129S1SvImJ_G0013743.1 mouse_genomes_project 6 137260173 137260822 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076331.1 MGP_129S1SvImJ_G0030464.1 mouse_genomes_project 6 12029973 12603695 + MGP_129S1SvImJ_P0076331 Foxp2 protein_coding protein_coding MGP_129S1SvImJ_T0076332.1 MGP_129S1SvImJ_G0030464.1 mouse_genomes_project 6 12030012 12573640 + Foxp2 protein_coding retained_intron MGP_129S1SvImJ_T0076333.1 MGP_129S1SvImJ_G0030464.1 mouse_genomes_project 6 12030075 12115341 + Foxp2 protein_coding processed_transcript MGP_129S1SvImJ_T0076334.1 MGP_129S1SvImJ_G0030464.1 mouse_genomes_project 6 12030101 12434464 + MGP_129S1SvImJ_P0076334 Foxp2 protein_coding protein_coding MGP_129S1SvImJ_T0076335.1 MGP_129S1SvImJ_G0030464.1 mouse_genomes_project 6 12030102 12435446 + Foxp2 protein_coding retained_intron MGP_129S1SvImJ_T0076336.1 MGP_129S1SvImJ_G0030464.1 mouse_genomes_project 6 12032081 12337705 + Foxp2 protein_coding processed_transcript MGP_129S1SvImJ_T0076337.1 MGP_129S1SvImJ_G0030464.1 mouse_genomes_project 6 12324202 12340091 + MGP_129S1SvImJ_P0076337 Foxp2 protein_coding protein_coding MGP_129S1SvImJ_T0076338.1 MGP_129S1SvImJ_G0030464.1 mouse_genomes_project 6 12324972 12602919 + MGP_129S1SvImJ_P0076338 Foxp2 protein_coding protein_coding MGP_129S1SvImJ_T0076339.1 MGP_129S1SvImJ_G0030464.1 mouse_genomes_project 6 12324972 12599759 + MGP_129S1SvImJ_P0076339 Foxp2 protein_coding protein_coding MGP_129S1SvImJ_T0076340.1 MGP_129S1SvImJ_G0030464.1 mouse_genomes_project 6 12324972 12600040 + MGP_129S1SvImJ_P0076340 Foxp2 protein_coding protein_coding MGP_129S1SvImJ_T0076341.1 MGP_129S1SvImJ_G0030464.1 mouse_genomes_project 6 12325029 12554494 + MGP_129S1SvImJ_P0076341 Foxp2 protein_coding protein_coding MGP_129S1SvImJ_T0076342.1 MGP_129S1SvImJ_G0030464.1 mouse_genomes_project 6 12337694 12558868 + Foxp2 protein_coding retained_intron MGP_129S1SvImJ_T0076343.1 MGP_129S1SvImJ_G0030464.1 mouse_genomes_project 6 12337696 12537317 + MGP_129S1SvImJ_P0076343 Foxp2 protein_coding protein_coding MGP_129S1SvImJ_T0076344.1 MGP_129S1SvImJ_G0030464.1 mouse_genomes_project 6 12337696 12567375 + MGP_129S1SvImJ_P0076344 Foxp2 protein_coding protein_coding MGP_129S1SvImJ_T0076345.1 MGP_129S1SvImJ_G0030464.1 mouse_genomes_project 6 12337709 12567375 + MGP_129S1SvImJ_P0076345 Foxp2 protein_coding protein_coding MGP_129S1SvImJ_T0076346.1 MGP_129S1SvImJ_G0030464.1 mouse_genomes_project 6 12399497 12434464 + Foxp2 protein_coding processed_transcript MGP_129S1SvImJ_T0076347.1 MGP_129S1SvImJ_G0030464.1 mouse_genomes_project 6 12474017 12475195 + Foxp2 protein_coding retained_intron MGP_129S1SvImJ_T0076348.1 MGP_129S1SvImJ_G0030464.1 mouse_genomes_project 6 12534178 12535584 + Foxp2 protein_coding processed_transcript MGP_129S1SvImJ_T0076349.1 MGP_129S1SvImJ_G0030464.1 mouse_genomes_project 6 12534178 12600784 + MGP_129S1SvImJ_P0076349 Foxp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0101293.1 MGP_129S1SvImJ_G0039360.1 mouse_genomes_project 6 139941643 139941758 + Gm25136 snoRNA snoRNA MGP_129S1SvImJ_T0005145.1 MGP_129S1SvImJ_G0004392.1 mouse_genomes_project 6 150022652 150026531 + Gm15687 antisense antisense MGP_129S1SvImJ_T0000300.1 MGP_129S1SvImJ_G0000242.1 mouse_genomes_project 6 67959089 67959555 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0000210.1 MGP_129S1SvImJ_G0000162.1 mouse_genomes_project 6 70362295 70363020 - MGP_129S1SvImJ_P0000210 Igkv1-35 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000211.1 MGP_129S1SvImJ_G0000162.1 mouse_genomes_project 6 70362295 70363020 - MGP_129S1SvImJ_P0000211 Igkv1-35 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000334.1 MGP_129S1SvImJ_G0000276.1 mouse_genomes_project 6 69834144 69842328 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0015338.1 MGP_129S1SvImJ_G0013427.1 mouse_genomes_project 6 42009784 42011532 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101937.1 MGP_129S1SvImJ_G0039831.1 mouse_genomes_project 6 62869692 62872599 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101938.1 MGP_129S1SvImJ_G0039831.1 mouse_genomes_project 6 62870042 62871454 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0078522.1 MGP_129S1SvImJ_G0030969.1 mouse_genomes_project 6 87268731 87274602 + Figla protein_coding processed_transcript MGP_129S1SvImJ_T0078523.1 MGP_129S1SvImJ_G0030969.1 mouse_genomes_project 6 87271001 87274812 + MGP_129S1SvImJ_P0078523 Figla protein_coding protein_coding MGP_129S1SvImJ_T0078534.1 MGP_129S1SvImJ_G0030971.1 mouse_genomes_project 6 87458766 87542306 + MGP_129S1SvImJ_P0078534 Tgfa protein_coding protein_coding MGP_129S1SvImJ_T0078535.1 MGP_129S1SvImJ_G0030971.1 mouse_genomes_project 6 87458794 87473442 + Tgfa protein_coding processed_transcript MGP_129S1SvImJ_T0078536.1 MGP_129S1SvImJ_G0030971.1 mouse_genomes_project 6 87458933 87538612 + MGP_129S1SvImJ_P0078536 Tgfa protein_coding protein_coding MGP_129S1SvImJ_T0078537.1 MGP_129S1SvImJ_G0030971.1 mouse_genomes_project 6 87475106 87538802 + Tgfa protein_coding processed_transcript MGP_129S1SvImJ_T0015412.1 MGP_129S1SvImJ_G0013501.1 mouse_genomes_project 6 65346841 65348630 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078146.1 MGP_129S1SvImJ_G0030891.1 mouse_genomes_project 6 78031275 78046212 + MGP_129S1SvImJ_P0078146 Lrrtm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078147.1 MGP_129S1SvImJ_G0030891.1 mouse_genomes_project 6 78031283 78034104 + MGP_129S1SvImJ_P0078147 Lrrtm1 protein_coding protein_coding MGP_129S1SvImJ_T0078148.1 MGP_129S1SvImJ_G0030891.1 mouse_genomes_project 6 78031304 78034098 + MGP_129S1SvImJ_P0078148 Lrrtm1 protein_coding protein_coding MGP_129S1SvImJ_T0078149.1 MGP_129S1SvImJ_G0030891.1 mouse_genomes_project 6 78031508 78032699 + MGP_129S1SvImJ_P0078149 Lrrtm1 protein_coding protein_coding MGP_129S1SvImJ_T0015659.1 MGP_129S1SvImJ_G0013748.1 mouse_genomes_project 6 139506727 139507633 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080537.1 MGP_129S1SvImJ_G0031399.1 mouse_genomes_project 6 137272907 137276520 + MGP_129S1SvImJ_P0080537 Smim10l1 protein_coding protein_coding MGP_129S1SvImJ_T0080538.1 MGP_129S1SvImJ_G0031399.1 mouse_genomes_project 6 137273263 137279668 + MGP_129S1SvImJ_P0080538 Smim10l1 protein_coding protein_coding MGP_129S1SvImJ_T0080539.1 MGP_129S1SvImJ_G0031399.1 mouse_genomes_project 6 137273297 137279670 + MGP_129S1SvImJ_P0080539 Smim10l1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080540.1 MGP_129S1SvImJ_G0031399.1 mouse_genomes_project 6 137273499 137276199 + MGP_129S1SvImJ_P0080540 Smim10l1 protein_coding protein_coding MGP_129S1SvImJ_T0002116.1 MGP_129S1SvImJ_G0002029.1 mouse_genomes_project 6 98975644 98979171 + TEC TEC MGP_129S1SvImJ_T0015607.1 MGP_129S1SvImJ_G0013696.1 mouse_genomes_project 6 127556229 127556542 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077562.1 MGP_129S1SvImJ_G0030746.1 mouse_genomes_project 6 51455698 51461586 - MGP_129S1SvImJ_P0077562 Hoxa7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077563.1 MGP_129S1SvImJ_G0030746.1 mouse_genomes_project 6 51455705 51458698 - MGP_129S1SvImJ_P0077563 Hoxa7 protein_coding protein_coding MGP_129S1SvImJ_T0077564.1 MGP_129S1SvImJ_G0030746.1 mouse_genomes_project 6 51456946 51459904 - MGP_129S1SvImJ_P0077564 Hoxa7 protein_coding protein_coding MGP_129S1SvImJ_T0077565.1 MGP_129S1SvImJ_G0030746.1 mouse_genomes_project 6 51457202 51463029 - MGP_129S1SvImJ_P0077565 Hoxa7 protein_coding protein_coding MGP_129S1SvImJ_T0077566.1 MGP_129S1SvImJ_G0030746.1 mouse_genomes_project 6 51457633 51458645 - MGP_129S1SvImJ_P0077566 Hoxa7 protein_coding protein_coding MGP_129S1SvImJ_T0010817.1 MGP_129S1SvImJ_G0008933.1 mouse_genomes_project 6 117699261 117699356 + Gm24767 miRNA miRNA MGP_129S1SvImJ_T0010811.1 MGP_129S1SvImJ_G0008927.1 mouse_genomes_project 6 107588107 107588187 + Gm25570 miRNA miRNA MGP_129S1SvImJ_T0002142.1 MGP_129S1SvImJ_G0002055.1 mouse_genomes_project 6 115934467 115937578 + TEC TEC MGP_129S1SvImJ_T0008641.1 MGP_129S1SvImJ_G0006988.1 mouse_genomes_project 6 72526029 72552798 - 9130221F21Rik lincRNA lincRNA MGP_129S1SvImJ_T0078362.1 MGP_129S1SvImJ_G0030937.1 mouse_genomes_project 6 84736993 84766830 + MGP_129S1SvImJ_P0078362 Vax2 protein_coding protein_coding MGP_129S1SvImJ_T0079653.1 MGP_129S1SvImJ_G0031186.1 mouse_genomes_project 6 121184755 121207082 - MGP_129S1SvImJ_P0079653 Zfp248 protein_coding protein_coding MGP_129S1SvImJ_T0079654.1 MGP_129S1SvImJ_G0031186.1 mouse_genomes_project 6 121190561 121207399 - Zfp248 protein_coding processed_transcript MGP_129S1SvImJ_T0079655.1 MGP_129S1SvImJ_G0031186.1 mouse_genomes_project 6 121190639 121207045 - MGP_129S1SvImJ_P0079655 Zfp248 protein_coding protein_coding MGP_129S1SvImJ_T0079656.1 MGP_129S1SvImJ_G0031186.1 mouse_genomes_project 6 121205078 121207482 - Zfp248 protein_coding retained_intron MGP_129S1SvImJ_T0079657.1 MGP_129S1SvImJ_G0031186.1 mouse_genomes_project 6 121205111 121207451 - Zfp248 protein_coding retained_intron MGP_129S1SvImJ_T0079658.1 MGP_129S1SvImJ_G0031186.1 mouse_genomes_project 6 121205147 121206736 - Zfp248 protein_coding processed_transcript MGP_129S1SvImJ_T0008679.1 MGP_129S1SvImJ_G0007017.1 mouse_genomes_project 6 90719327 90735195 - Gm44205 lincRNA lincRNA MGP_129S1SvImJ_T0008680.1 MGP_129S1SvImJ_G0007017.1 mouse_genomes_project 6 90719333 90723021 - Gm44205 lincRNA lincRNA MGP_129S1SvImJ_T0008681.1 MGP_129S1SvImJ_G0007017.1 mouse_genomes_project 6 90734120 90735164 - Gm44205 lincRNA lincRNA MGP_129S1SvImJ_T0015587.1 MGP_129S1SvImJ_G0013676.1 mouse_genomes_project 6 124491012 124491337 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079169.1 MGP_129S1SvImJ_G0031096.1 mouse_genomes_project 6 109016461 109036260 - MGP_129S1SvImJ_P0079169 Crbn protein_coding protein_coding MGP_129S1SvImJ_T0079170.1 MGP_129S1SvImJ_G0031096.1 mouse_genomes_project 6 109016461 109036251 - MGP_129S1SvImJ_P0079170 Crbn protein_coding protein_coding MGP_129S1SvImJ_T0079171.1 MGP_129S1SvImJ_G0031096.1 mouse_genomes_project 6 109019722 109035231 - MGP_129S1SvImJ_P0079171 Crbn protein_coding protein_coding MGP_129S1SvImJ_T0079172.1 MGP_129S1SvImJ_G0031096.1 mouse_genomes_project 6 109025004 109036247 - Crbn protein_coding retained_intron MGP_129S1SvImJ_T0079173.1 MGP_129S1SvImJ_G0031096.1 mouse_genomes_project 6 109033377 109036263 - Crbn protein_coding retained_intron MGP_129S1SvImJ_T0005100.1 MGP_129S1SvImJ_G0004354.1 mouse_genomes_project 6 128019119 128022402 - Gm15884 antisense antisense MGP_129S1SvImJ_T0015468.1 MGP_129S1SvImJ_G0013557.1 mouse_genomes_project 6 76481760 76482159 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077323.1 MGP_129S1SvImJ_G0030686.1 mouse_genomes_project 6 46781583 46814822 + MGP_129S1SvImJ_P0077323 Zfp282 protein_coding protein_coding MGP_129S1SvImJ_T0077324.1 MGP_129S1SvImJ_G0030686.1 mouse_genomes_project 6 46782035 46798379 + Zfp282 protein_coding retained_intron MGP_129S1SvImJ_T0000240.1 MGP_129S1SvImJ_G0000186.1 mouse_genomes_project 6 71013763 71014363 + MGP_129S1SvImJ_P0000240 Igkv3-7 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000241.1 MGP_129S1SvImJ_G0000186.1 mouse_genomes_project 6 71014064 71014363 + MGP_129S1SvImJ_P0000241 Igkv3-7 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0002696.1 MGP_129S1SvImJ_G0002578.1 mouse_genomes_project 6 39522638 39523177 + MGP_129S1SvImJ_P0002696 Trbv3 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002206.1 MGP_129S1SvImJ_G0002118.1 mouse_genomes_project 6 151877677 151878604 - TEC TEC MGP_129S1SvImJ_T0076511.1 MGP_129S1SvImJ_G0030495.1 mouse_genomes_project 6 22094713 22138710 + MGP_129S1SvImJ_P0076511 Asb15 protein_coding protein_coding MGP_129S1SvImJ_T0076512.1 MGP_129S1SvImJ_G0030495.1 mouse_genomes_project 6 22123107 22140878 + MGP_129S1SvImJ_P0076512 Asb15 protein_coding protein_coding MGP_129S1SvImJ_T0080878.1 MGP_129S1SvImJ_G0031470.1 mouse_genomes_project 6 147592566 147615971 - MGP_129S1SvImJ_P0080878 Sult6b2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080879.1 MGP_129S1SvImJ_G0031470.1 mouse_genomes_project 6 147593143 147615935 - MGP_129S1SvImJ_P0080879 Sult6b2 protein_coding protein_coding MGP_129S1SvImJ_T0001955.1 MGP_129S1SvImJ_G0001868.1 mouse_genomes_project 6 22225513 22228409 - TEC TEC MGP_129S1SvImJ_T0002047.1 MGP_129S1SvImJ_G0001960.1 mouse_genomes_project 6 78399466 78400953 - TEC TEC MGP_129S1SvImJ_T0015597.1 MGP_129S1SvImJ_G0013686.1 mouse_genomes_project 6 125383327 125383566 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077898.1 MGP_129S1SvImJ_G0030841.1 mouse_genomes_project 6 66766981 66769086 - MGP_129S1SvImJ_P0077898 Vmn1r39 protein_coding protein_coding MGP_129S1SvImJ_T0002112.1 MGP_129S1SvImJ_G0002025.1 mouse_genomes_project 6 94881061 94885049 + TEC TEC MGP_129S1SvImJ_T0079255.1 MGP_129S1SvImJ_G0031113.1 mouse_genomes_project 6 115662019 115693952 - MGP_129S1SvImJ_P0079255 Lhfpl4 protein_coding protein_coding MGP_129S1SvImJ_T0079256.1 MGP_129S1SvImJ_G0031113.1 mouse_genomes_project 6 115670464 115691205 - MGP_129S1SvImJ_P0079256 Lhfpl4 protein_coding protein_coding MGP_129S1SvImJ_T0002182.1 MGP_129S1SvImJ_G0002094.1 mouse_genomes_project 6 138894366 138895116 + TEC TEC MGP_129S1SvImJ_T0099998.1 MGP_129S1SvImJ_G0038065.1 mouse_genomes_project 6 47219770 47219970 + Gm22122 snRNA snRNA MGP_129S1SvImJ_T0076844.1 MGP_129S1SvImJ_G0030554.1 mouse_genomes_project 6 32084519 32197154 + MGP_129S1SvImJ_P0076844 Lrguk protein_coding protein_coding MGP_129S1SvImJ_T0076845.1 MGP_129S1SvImJ_G0030554.1 mouse_genomes_project 6 32084521 32104660 + MGP_129S1SvImJ_P0076845 Lrguk protein_coding protein_coding MGP_129S1SvImJ_T0076846.1 MGP_129S1SvImJ_G0030554.1 mouse_genomes_project 6 32096659 32104675 + MGP_129S1SvImJ_P0076846 Lrguk protein_coding protein_coding MGP_129S1SvImJ_T0077943.1 MGP_129S1SvImJ_G0030851.1 mouse_genomes_project 6 71399676 71404193 + MGP_129S1SvImJ_P0077943 Foxi3 protein_coding protein_coding MGP_129S1SvImJ_T0077944.1 MGP_129S1SvImJ_G0030851.1 mouse_genomes_project 6 71399751 71404196 + MGP_129S1SvImJ_P0077944 Foxi3 protein_coding protein_coding MGP_129S1SvImJ_T0005113.1 MGP_129S1SvImJ_G0004365.1 mouse_genomes_project 6 131483730 131494028 - Gm15870 antisense antisense MGP_129S1SvImJ_T0077931.1 MGP_129S1SvImJ_G0030845.1 mouse_genomes_project 6 67278924 67336593 - MGP_129S1SvImJ_P0077931 Il12rb2 protein_coding protein_coding MGP_129S1SvImJ_T0077932.1 MGP_129S1SvImJ_G0030845.1 mouse_genomes_project 6 67279612 67375454 - MGP_129S1SvImJ_P0077932 Il12rb2 protein_coding protein_coding MGP_129S1SvImJ_T0098623.1 MGP_129S1SvImJ_G0036708.1 mouse_genomes_project 6 114006649 114006760 + Gm22093 rRNA rRNA MGP_129S1SvImJ_T0077942.1 MGP_129S1SvImJ_G0030850.1 mouse_genomes_project 6 71353985 71359824 - MGP_129S1SvImJ_P0077942 Tex37 protein_coding protein_coding MGP_129S1SvImJ_T0015302.1 MGP_129S1SvImJ_G0013391.1 mouse_genomes_project 6 22160354 22161063 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015478.1 MGP_129S1SvImJ_G0013567.1 mouse_genomes_project 6 83197441 83198113 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008784.1 MGP_129S1SvImJ_G0007095.1 mouse_genomes_project 6 150293820 150299420 + 2010013B24Rik lincRNA lincRNA MGP_129S1SvImJ_T0079033.1 MGP_129S1SvImJ_G0031071.1 mouse_genomes_project 6 98648824 98886756 - MGP_129S1SvImJ_P0079033 Fam19a4 protein_coding protein_coding MGP_129S1SvImJ_T0079034.1 MGP_129S1SvImJ_G0031071.1 mouse_genomes_project 6 98882970 98886736 - Fam19a4 protein_coding retained_intron MGP_129S1SvImJ_T0002181.1 MGP_129S1SvImJ_G0002093.1 mouse_genomes_project 6 138491008 138491705 - TEC TEC MGP_129S1SvImJ_T0079686.1 MGP_129S1SvImJ_G0031190.1 mouse_genomes_project 6 121961729 122003627 + MGP_129S1SvImJ_P0079686 Dcp1b protein_coding protein_coding MGP_129S1SvImJ_T0079687.1 MGP_129S1SvImJ_G0031190.1 mouse_genomes_project 6 121961764 122002196 + MGP_129S1SvImJ_P0079687 Dcp1b protein_coding protein_coding MGP_129S1SvImJ_T0079688.1 MGP_129S1SvImJ_G0031190.1 mouse_genomes_project 6 121978783 122002217 + Dcp1b protein_coding retained_intron MGP_129S1SvImJ_T0079689.1 MGP_129S1SvImJ_G0031190.1 mouse_genomes_project 6 121986881 121996858 + Dcp1b protein_coding retained_intron MGP_129S1SvImJ_T0079690.1 MGP_129S1SvImJ_G0031190.1 mouse_genomes_project 6 121999554 122003625 + Dcp1b protein_coding retained_intron MGP_129S1SvImJ_T0079499.1 MGP_129S1SvImJ_G0031157.1 mouse_genomes_project 6 118485097 118497557 - MGP_129S1SvImJ_P0079499 Mbd4 protein_coding protein_coding MGP_129S1SvImJ_T0079500.1 MGP_129S1SvImJ_G0031157.1 mouse_genomes_project 6 118485599 118492893 - Mbd4 protein_coding processed_transcript MGP_129S1SvImJ_T0079501.1 MGP_129S1SvImJ_G0031157.1 mouse_genomes_project 6 118486743 118497551 - MGP_129S1SvImJ_P0079501 Mbd4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079502.1 MGP_129S1SvImJ_G0031157.1 mouse_genomes_project 6 118486743 118493154 - MGP_129S1SvImJ_P0079502 Mbd4 protein_coding protein_coding MGP_129S1SvImJ_T0079503.1 MGP_129S1SvImJ_G0031157.1 mouse_genomes_project 6 118491873 118497474 - MGP_129S1SvImJ_P0079503 Mbd4 protein_coding protein_coding MGP_129S1SvImJ_T0015530.1 MGP_129S1SvImJ_G0013619.1 mouse_genomes_project 6 102237510 102302991 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010763.1 MGP_129S1SvImJ_G0008879.1 mouse_genomes_project 6 12566680 12566791 + Gm25470 miRNA miRNA MGP_129S1SvImJ_T0005106.1 MGP_129S1SvImJ_G0004359.1 mouse_genomes_project 6 130175185 130198089 + Gm26673 antisense antisense MGP_129S1SvImJ_T0010821.1 MGP_129S1SvImJ_G0008937.1 mouse_genomes_project 6 121186501 121186584 + Gm25953 miRNA miRNA MGP_129S1SvImJ_T0000172.1 MGP_129S1SvImJ_G0000131.1 mouse_genomes_project 6 68848802 68849358 - MGP_129S1SvImJ_P0000172 Igkv10-96 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0002143.1 MGP_129S1SvImJ_G0002056.1 mouse_genomes_project 6 116221282 116223770 - TEC TEC MGP_129S1SvImJ_T0077967.1 MGP_129S1SvImJ_G0030859.1 mouse_genomes_project 6 71976256 71993251 + MGP_129S1SvImJ_P0077967 Rnf103 protein_coding protein_coding MGP_129S1SvImJ_T0077968.1 MGP_129S1SvImJ_G0030859.1 mouse_genomes_project 6 71976272 71993251 + MGP_129S1SvImJ_P0077968 Rnf103 protein_coding protein_coding MGP_129S1SvImJ_T0077969.1 MGP_129S1SvImJ_G0030859.1 mouse_genomes_project 6 71976365 71993133 + MGP_129S1SvImJ_P0077969 Rnf103 protein_coding protein_coding MGP_129S1SvImJ_T0077970.1 MGP_129S1SvImJ_G0030859.1 mouse_genomes_project 6 71986255 71989526 + Rnf103 protein_coding retained_intron MGP_129S1SvImJ_T0080115.1 MGP_129S1SvImJ_G0031278.1 mouse_genomes_project 6 128249261 128255092 + Mlf2 protein_coding retained_intron MGP_129S1SvImJ_T0080116.1 MGP_129S1SvImJ_G0031278.1 mouse_genomes_project 6 128249280 128252239 + Mlf2 protein_coding retained_intron MGP_129S1SvImJ_T0080117.1 MGP_129S1SvImJ_G0031278.1 mouse_genomes_project 6 128249280 128250564 + Mlf2 protein_coding retained_intron MGP_129S1SvImJ_T0080118.1 MGP_129S1SvImJ_G0031278.1 mouse_genomes_project 6 128249300 128252233 + MGP_129S1SvImJ_P0080118 Mlf2 protein_coding protein_coding MGP_129S1SvImJ_T0080119.1 MGP_129S1SvImJ_G0031278.1 mouse_genomes_project 6 128249307 128253999 + MGP_129S1SvImJ_P0080119 Mlf2 protein_coding protein_coding MGP_129S1SvImJ_T0080120.1 MGP_129S1SvImJ_G0031278.1 mouse_genomes_project 6 128249351 128253998 + MGP_129S1SvImJ_P0080120 Mlf2 protein_coding protein_coding MGP_129S1SvImJ_T0080121.1 MGP_129S1SvImJ_G0031278.1 mouse_genomes_project 6 128249785 128252225 + MGP_129S1SvImJ_P0080121 Mlf2 protein_coding protein_coding MGP_129S1SvImJ_T0080122.1 MGP_129S1SvImJ_G0031278.1 mouse_genomes_project 6 128250499 128253147 + Mlf2 protein_coding retained_intron MGP_129S1SvImJ_T0077029.1 MGP_129S1SvImJ_G0030591.1 mouse_genomes_project 6 37035848 37219078 - MGP_129S1SvImJ_P0077029 Hipk2 protein_coding protein_coding MGP_129S1SvImJ_T0077030.1 MGP_129S1SvImJ_G0030591.1 mouse_genomes_project 6 37035853 37219126 - MGP_129S1SvImJ_P0077030 Hipk2 protein_coding protein_coding MGP_129S1SvImJ_T0077031.1 MGP_129S1SvImJ_G0030591.1 mouse_genomes_project 6 37036102 37218972 - MGP_129S1SvImJ_P0077031 Hipk2 protein_coding protein_coding MGP_129S1SvImJ_T0077032.1 MGP_129S1SvImJ_G0030591.1 mouse_genomes_project 6 37076112 37082674 - Hipk2 protein_coding processed_transcript MGP_129S1SvImJ_T0077033.1 MGP_129S1SvImJ_G0030591.1 mouse_genomes_project 6 37084864 37159605 - Hipk2 protein_coding retained_intron MGP_129S1SvImJ_T0077034.1 MGP_129S1SvImJ_G0030591.1 mouse_genomes_project 6 37159165 37179491 - Hipk2 protein_coding retained_intron MGP_129S1SvImJ_T0000184.1 MGP_129S1SvImJ_G0000140.1 mouse_genomes_project 6 69212397 69212863 - MGP_129S1SvImJ_P0000184 Igkv13-84 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0002196.1 MGP_129S1SvImJ_G0002108.1 mouse_genomes_project 6 146095776 146099611 + TEC TEC MGP_129S1SvImJ_T0076566.1 MGP_129S1SvImJ_G0030511.1 mouse_genomes_project 6 26209402 26629024 + MGP_129S1SvImJ_P0076566 Snd1 protein_coding protein_coding MGP_129S1SvImJ_T0076567.1 MGP_129S1SvImJ_G0030511.1 mouse_genomes_project 6 26209402 26617960 + MGP_129S1SvImJ_P0076567 Snd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076568.1 MGP_129S1SvImJ_G0030511.1 mouse_genomes_project 6 26209413 26681163 + MGP_129S1SvImJ_P0076568 Snd1 protein_coding protein_coding MGP_129S1SvImJ_T0076569.1 MGP_129S1SvImJ_G0030511.1 mouse_genomes_project 6 26209483 26211909 + Snd1 protein_coding retained_intron MGP_129S1SvImJ_T0076570.1 MGP_129S1SvImJ_G0030511.1 mouse_genomes_project 6 26209619 26534003 + MGP_129S1SvImJ_P0076570 Snd1 protein_coding protein_coding MGP_129S1SvImJ_T0076571.1 MGP_129S1SvImJ_G0030511.1 mouse_genomes_project 6 26295294 26462121 + Snd1 protein_coding processed_transcript MGP_129S1SvImJ_T0076573.1 MGP_129S1SvImJ_G0030511.1 mouse_genomes_project 6 26441353 26443532 + Snd1 protein_coding processed_transcript MGP_129S1SvImJ_T0076574.1 MGP_129S1SvImJ_G0030511.1 mouse_genomes_project 6 26442164 26462131 + Snd1 protein_coding processed_transcript MGP_129S1SvImJ_T0076575.1 MGP_129S1SvImJ_G0030511.1 mouse_genomes_project 6 26501709 26615224 + Snd1 protein_coding processed_transcript MGP_129S1SvImJ_T0076576.1 MGP_129S1SvImJ_G0030511.1 mouse_genomes_project 6 26513569 26620470 + Snd1 protein_coding processed_transcript MGP_129S1SvImJ_T0076578.1 MGP_129S1SvImJ_G0030511.1 mouse_genomes_project 6 26587680 26620545 + Snd1 protein_coding processed_transcript MGP_129S1SvImJ_T0076579.1 MGP_129S1SvImJ_G0030511.1 mouse_genomes_project 6 26620279 26626719 + Snd1 protein_coding retained_intron MGP_129S1SvImJ_T0080464.1 MGP_129S1SvImJ_G0031354.1 mouse_genomes_project 6 133284646 133298378 - MGP_129S1SvImJ_P0080464 Klrk1 protein_coding protein_coding MGP_129S1SvImJ_T0080465.1 MGP_129S1SvImJ_G0031354.1 mouse_genomes_project 6 133286733 133297238 - MGP_129S1SvImJ_P0080465 Klrk1 protein_coding protein_coding MGP_129S1SvImJ_T0080466.1 MGP_129S1SvImJ_G0031354.1 mouse_genomes_project 6 133286779 133298355 - MGP_129S1SvImJ_P0080466 Klrk1 protein_coding protein_coding MGP_129S1SvImJ_T0080467.1 MGP_129S1SvImJ_G0031354.1 mouse_genomes_project 6 133290808 133297047 - Klrk1 protein_coding retained_intron MGP_129S1SvImJ_T0080468.1 MGP_129S1SvImJ_G0031354.1 mouse_genomes_project 6 133290883 133297150 - Klrk1 protein_coding retained_intron MGP_129S1SvImJ_T0080469.1 MGP_129S1SvImJ_G0031354.1 mouse_genomes_project 6 133295068 133298374 - Klrk1 protein_coding retained_intron MGP_129S1SvImJ_T0015542.1 MGP_129S1SvImJ_G0013631.1 mouse_genomes_project 6 107239067 107240982 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015636.1 MGP_129S1SvImJ_G0013725.1 mouse_genomes_project 6 134190437 134190778 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015259.1 MGP_129S1SvImJ_G0013348.1 mouse_genomes_project 6 4091614 4092239 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000165.1 MGP_129S1SvImJ_G0000127.1 mouse_genomes_project 6 68681811 68682300 + MGP_129S1SvImJ_P0000165 Igkv20-101-2 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0080860.1 MGP_129S1SvImJ_G0031465.1 mouse_genomes_project 6 147211133 147262591 - MGP_129S1SvImJ_P0080860 Gys2 protein_coding protein_coding MGP_129S1SvImJ_T0080861.1 MGP_129S1SvImJ_G0031465.1 mouse_genomes_project 6 147211137 147212140 - MGP_129S1SvImJ_P0080861 Gys2 protein_coding protein_coding MGP_129S1SvImJ_T0011696.1 MGP_129S1SvImJ_G0009812.1 mouse_genomes_project 6 150273953 150274283 - Gm22793 misc_RNA misc_RNA MGP_129S1SvImJ_T0002056.1 MGP_129S1SvImJ_G0001969.1 mouse_genomes_project 6 81318725 81321213 + TEC TEC MGP_129S1SvImJ_T0002042.1 MGP_129S1SvImJ_G0001955.1 mouse_genomes_project 6 78177555 78179741 - TEC TEC MGP_129S1SvImJ_T0018288.1 MGP_129S1SvImJ_G0015630.1 mouse_genomes_project 6 51401075 51404851 + Hoxaas2 processed_transcript antisense MGP_129S1SvImJ_T0018289.1 MGP_129S1SvImJ_G0015630.1 mouse_genomes_project 6 51401917 51404964 + Hoxaas2 processed_transcript retained_intron MGP_129S1SvImJ_T0018290.1 MGP_129S1SvImJ_G0015630.1 mouse_genomes_project 6 51403909 51404964 + Hoxaas2 processed_transcript processed_transcript MGP_129S1SvImJ_T0076528.1 MGP_129S1SvImJ_G0030503.1 mouse_genomes_project 6 23258320 23282062 - MGP_129S1SvImJ_P0076528 Gpr37 protein_coding protein_coding MGP_129S1SvImJ_T0076529.1 MGP_129S1SvImJ_G0030503.1 mouse_genomes_project 6 23259840 23282999 - MGP_129S1SvImJ_P0076529 Gpr37 protein_coding protein_coding MGP_129S1SvImJ_T0102616.1 MGP_129S1SvImJ_G0040449.1 mouse_genomes_project 6 57623242 57624152 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002107.1 MGP_129S1SvImJ_G0002020.1 mouse_genomes_project 6 93320670 93322613 - TEC TEC MGP_129S1SvImJ_T0015454.1 MGP_129S1SvImJ_G0013543.1 mouse_genomes_project 6 71822743 71823142 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098995.1 MGP_129S1SvImJ_G0037069.1 mouse_genomes_project 6 141974044 141974351 + Gm44258 sense_intronic sense_intronic MGP_129S1SvImJ_T0000205.1 MGP_129S1SvImJ_G0000159.1 mouse_genomes_project 6 70293094 70293557 - MGP_129S1SvImJ_P0000205 Igkv12-38 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000206.1 MGP_129S1SvImJ_G0000159.1 mouse_genomes_project 6 70293094 70293557 - MGP_129S1SvImJ_P0000206 Igkv12-38 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0015360.1 MGP_129S1SvImJ_G0013449.1 mouse_genomes_project 6 48065531 48066132 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015523.1 MGP_129S1SvImJ_G0013612.1 mouse_genomes_project 6 97838265 97838632 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015656.1 MGP_129S1SvImJ_G0013745.1 mouse_genomes_project 6 138098460 138099123 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008598.1 MGP_129S1SvImJ_G0006954.1 mouse_genomes_project 6 49907184 49947059 + C530044C16Rik lincRNA lincRNA MGP_129S1SvImJ_T0008599.1 MGP_129S1SvImJ_G0006954.1 mouse_genomes_project 6 49907393 49947198 + C530044C16Rik lincRNA lincRNA MGP_129S1SvImJ_T0015581.1 MGP_129S1SvImJ_G0013670.1 mouse_genomes_project 6 120726904 120727690 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002082.1 MGP_129S1SvImJ_G0001995.1 mouse_genomes_project 6 88885888 88888524 + TEC TEC MGP_129S1SvImJ_T0078900.1 MGP_129S1SvImJ_G0031043.1 mouse_genomes_project 6 92737842 92759676 + MGP_129S1SvImJ_P0078900 Hdac11 protein_coding protein_coding MGP_129S1SvImJ_T0078901.1 MGP_129S1SvImJ_G0031043.1 mouse_genomes_project 6 92737910 92740809 + Hdac11 protein_coding retained_intron MGP_129S1SvImJ_T0078902.1 MGP_129S1SvImJ_G0031043.1 mouse_genomes_project 6 92737918 92751532 + MGP_129S1SvImJ_P0078902 Hdac11 protein_coding protein_coding MGP_129S1SvImJ_T0078903.1 MGP_129S1SvImJ_G0031043.1 mouse_genomes_project 6 92738256 92752854 + Hdac11 protein_coding retained_intron MGP_129S1SvImJ_T0078904.1 MGP_129S1SvImJ_G0031043.1 mouse_genomes_project 6 92750661 92754460 + MGP_129S1SvImJ_P0078904 Hdac11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078905.1 MGP_129S1SvImJ_G0031043.1 mouse_genomes_project 6 92756766 92758275 + Hdac11 protein_coding retained_intron MGP_129S1SvImJ_T0076763.1 MGP_129S1SvImJ_G0030540.1 mouse_genomes_project 6 28468900 28493874 + MGP_129S1SvImJ_P0076763 Cpa4 protein_coding protein_coding MGP_129S1SvImJ_T0078835.1 MGP_129S1SvImJ_G0031023.1 mouse_genomes_project 6 91297001 91298099 - MGP_129S1SvImJ_P0078835 Vmn1r42 protein_coding protein_coding MGP_129S1SvImJ_T0015591.1 MGP_129S1SvImJ_G0013680.1 mouse_genomes_project 6 124671238 124671645 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078214.1 MGP_129S1SvImJ_G0030910.1 mouse_genomes_project 6 84036853 84040238 + Loxl3 protein_coding processed_transcript MGP_129S1SvImJ_T0078215.1 MGP_129S1SvImJ_G0030910.1 mouse_genomes_project 6 84036853 84056245 + MGP_129S1SvImJ_P0078215 Loxl3 protein_coding protein_coding MGP_129S1SvImJ_T0078216.1 MGP_129S1SvImJ_G0030910.1 mouse_genomes_project 6 84036853 84056245 + MGP_129S1SvImJ_P0078216 Loxl3 protein_coding protein_coding MGP_129S1SvImJ_T0078217.1 MGP_129S1SvImJ_G0030910.1 mouse_genomes_project 6 84041760 84048961 + Loxl3 protein_coding processed_transcript MGP_129S1SvImJ_T0078218.1 MGP_129S1SvImJ_G0030910.1 mouse_genomes_project 6 84053551 84054351 + Loxl3 protein_coding retained_intron MGP_129S1SvImJ_T0079590.1 MGP_129S1SvImJ_G0031172.1 mouse_genomes_project 6 119264544 119265638 - MGP_129S1SvImJ_P0079590 Olfr215 protein_coding protein_coding MGP_129S1SvImJ_T0002209.1 MGP_129S1SvImJ_G0002121.1 mouse_genomes_project 6 153436723 153440235 - TEC TEC MGP_129S1SvImJ_T0102593.1 MGP_129S1SvImJ_G0040426.1 mouse_genomes_project 6 32459195 32460174 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0098984.1 MGP_129S1SvImJ_G0037058.1 mouse_genomes_project 6 85011163 85013935 + Gm43920 sense_intronic sense_intronic MGP_129S1SvImJ_T0015359.1 MGP_129S1SvImJ_G0013448.1 mouse_genomes_project 6 48056883 48057190 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015632.1 MGP_129S1SvImJ_G0013721.1 mouse_genomes_project 6 132530781 132531481 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080744.1 MGP_129S1SvImJ_G0031441.1 mouse_genomes_project 6 142935899 143181213 - MGP_129S1SvImJ_P0080744 Lmo3 protein_coding protein_coding MGP_129S1SvImJ_T0080745.1 MGP_129S1SvImJ_G0031441.1 mouse_genomes_project 6 142937184 143005184 - MGP_129S1SvImJ_P0080745 Lmo3 protein_coding protein_coding MGP_129S1SvImJ_T0080746.1 MGP_129S1SvImJ_G0031441.1 mouse_genomes_project 6 142937943 143009367 - MGP_129S1SvImJ_P0080746 Lmo3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080747.1 MGP_129S1SvImJ_G0031441.1 mouse_genomes_project 6 142938572 143006688 - MGP_129S1SvImJ_P0080747 Lmo3 protein_coding protein_coding MGP_129S1SvImJ_T0080748.1 MGP_129S1SvImJ_G0031441.1 mouse_genomes_project 6 142938576 143006631 - MGP_129S1SvImJ_P0080748 Lmo3 protein_coding protein_coding MGP_129S1SvImJ_T0080749.1 MGP_129S1SvImJ_G0031441.1 mouse_genomes_project 6 142938880 143011912 - MGP_129S1SvImJ_P0080749 Lmo3 protein_coding protein_coding MGP_129S1SvImJ_T0080750.1 MGP_129S1SvImJ_G0031441.1 mouse_genomes_project 6 142955910 143006713 - MGP_129S1SvImJ_P0080750 Lmo3 protein_coding protein_coding MGP_129S1SvImJ_T0080751.1 MGP_129S1SvImJ_G0031441.1 mouse_genomes_project 6 142999300 143011566 - MGP_129S1SvImJ_P0080751 Lmo3 protein_coding protein_coding MGP_129S1SvImJ_T0077536.1 MGP_129S1SvImJ_G0030736.1 mouse_genomes_project 6 50715618 50792289 + MGP_129S1SvImJ_P0077536 Snx10 protein_coding protein_coding MGP_129S1SvImJ_T0077537.1 MGP_129S1SvImJ_G0030736.1 mouse_genomes_project 6 50715699 50769811 + Snx10 protein_coding retained_intron MGP_129S1SvImJ_T0077538.1 MGP_129S1SvImJ_G0030736.1 mouse_genomes_project 6 50715975 50781957 + MGP_129S1SvImJ_P0077538 Snx10 protein_coding protein_coding MGP_129S1SvImJ_T0077539.1 MGP_129S1SvImJ_G0030736.1 mouse_genomes_project 6 50716000 50790046 + MGP_129S1SvImJ_P0077539 Snx10 protein_coding protein_coding MGP_129S1SvImJ_T0077540.1 MGP_129S1SvImJ_G0030736.1 mouse_genomes_project 6 50736067 50792280 + MGP_129S1SvImJ_P0077540 Snx10 protein_coding protein_coding MGP_129S1SvImJ_T0077541.1 MGP_129S1SvImJ_G0030736.1 mouse_genomes_project 6 50736068 50790682 + MGP_129S1SvImJ_P0077541 Snx10 protein_coding protein_coding MGP_129S1SvImJ_T0077542.1 MGP_129S1SvImJ_G0030736.1 mouse_genomes_project 6 50736110 50790653 + MGP_129S1SvImJ_P0077542 Snx10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078195.1 MGP_129S1SvImJ_G0030905.1 mouse_genomes_project 6 83574308 83680033 - Pole4 protein_coding processed_transcript MGP_129S1SvImJ_T0078196.1 MGP_129S1SvImJ_G0030905.1 mouse_genomes_project 6 83577177 83603777 - MGP_129S1SvImJ_P0078196 Pole4 protein_coding protein_coding MGP_129S1SvImJ_T0078197.1 MGP_129S1SvImJ_G0030905.1 mouse_genomes_project 6 83597607 83603836 - MGP_129S1SvImJ_P0078197 Pole4 protein_coding protein_coding MGP_129S1SvImJ_T0078198.1 MGP_129S1SvImJ_G0030905.1 mouse_genomes_project 6 83598222 83603427 - Pole4 protein_coding processed_transcript MGP_129S1SvImJ_T0078199.1 MGP_129S1SvImJ_G0030905.1 mouse_genomes_project 6 83598749 83603425 - Pole4 protein_coding processed_transcript MGP_129S1SvImJ_T0015483.1 MGP_129S1SvImJ_G0013572.1 mouse_genomes_project 6 84612249 84613021 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015390.1 MGP_129S1SvImJ_G0013479.1 mouse_genomes_project 6 60776707 60777593 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015670.1 MGP_129S1SvImJ_G0013759.1 mouse_genomes_project 6 145136173 145136658 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011661.1 MGP_129S1SvImJ_G0009777.1 mouse_genomes_project 6 51396459 51396673 + Gm27861 misc_RNA misc_RNA MGP_129S1SvImJ_T0078493.1 MGP_129S1SvImJ_G0030963.1 mouse_genomes_project 6 87055398 87057090 - MGP_129S1SvImJ_P0078493 Nat8 protein_coding protein_coding MGP_129S1SvImJ_T0076546.1 MGP_129S1SvImJ_G0030506.1 mouse_genomes_project 6 25950718 25974684 - MGP_129S1SvImJ_P0076546 Zfp800 protein_coding protein_coding MGP_129S1SvImJ_T0076547.1 MGP_129S1SvImJ_G0030506.1 mouse_genomes_project 6 25951031 26124500 - MGP_129S1SvImJ_P0076547 Zfp800 protein_coding protein_coding MGP_129S1SvImJ_T0076548.1 MGP_129S1SvImJ_G0030506.1 mouse_genomes_project 6 25953001 25974696 - MGP_129S1SvImJ_P0076548 Zfp800 protein_coding protein_coding MGP_129S1SvImJ_T0076549.1 MGP_129S1SvImJ_G0030506.1 mouse_genomes_project 6 25955048 25974687 - MGP_129S1SvImJ_P0076549 Zfp800 protein_coding protein_coding MGP_129S1SvImJ_T0076550.1 MGP_129S1SvImJ_G0030506.1 mouse_genomes_project 6 25955975 25974705 - MGP_129S1SvImJ_P0076550 Zfp800 protein_coding protein_coding MGP_129S1SvImJ_T0076518.1 MGP_129S1SvImJ_G0030498.1 mouse_genomes_project 6 22302747 22314695 + MGP_129S1SvImJ_P0076518 Hyal6 protein_coding protein_coding MGP_129S1SvImJ_T0015437.1 MGP_129S1SvImJ_G0013526.1 mouse_genomes_project 6 67857954 67858125 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010800.1 MGP_129S1SvImJ_G0008916.1 mouse_genomes_project 6 86487363 86487445 - Mir705 miRNA miRNA MGP_129S1SvImJ_T0080215.1 MGP_129S1SvImJ_G0031292.1 mouse_genomes_project 6 128564931 128572810 - MGP_129S1SvImJ_P0080215 Tapbpl protein_coding protein_coding MGP_129S1SvImJ_T0008522.1 MGP_129S1SvImJ_G0006904.1 mouse_genomes_project 6 10966064 11147674 + lincRNA lincRNA MGP_129S1SvImJ_T0008523.1 MGP_129S1SvImJ_G0006904.1 mouse_genomes_project 6 10966107 10991756 + lincRNA lincRNA MGP_129S1SvImJ_T0008642.1 MGP_129S1SvImJ_G0006989.1 mouse_genomes_project 6 72687436 72692295 + Gm45050 lincRNA lincRNA MGP_129S1SvImJ_T0078779.1 MGP_129S1SvImJ_G0031015.1 mouse_genomes_project 6 90256470 90257633 - Podxl2 protein_coding processed_transcript MGP_129S1SvImJ_T0078780.1 MGP_129S1SvImJ_G0031015.1 mouse_genomes_project 6 90256679 90288687 - MGP_129S1SvImJ_P0078780 Podxl2 protein_coding protein_coding MGP_129S1SvImJ_T0078781.1 MGP_129S1SvImJ_G0031015.1 mouse_genomes_project 6 90257450 90259835 - Podxl2 protein_coding retained_intron MGP_129S1SvImJ_T0078782.1 MGP_129S1SvImJ_G0031015.1 mouse_genomes_project 6 90258088 90263286 - Podxl2 protein_coding processed_transcript MGP_129S1SvImJ_T0078783.1 MGP_129S1SvImJ_G0031015.1 mouse_genomes_project 6 90260876 90262752 - Podxl2 protein_coding retained_intron MGP_129S1SvImJ_T0078784.1 MGP_129S1SvImJ_G0031015.1 mouse_genomes_project 6 90263587 90288446 - MGP_129S1SvImJ_P0078784 Podxl2 protein_coding protein_coding MGP_129S1SvImJ_T0078785.1 MGP_129S1SvImJ_G0031015.1 mouse_genomes_project 6 90263587 90288504 - MGP_129S1SvImJ_P0078785 Podxl2 protein_coding protein_coding MGP_129S1SvImJ_T0078786.1 MGP_129S1SvImJ_G0031015.1 mouse_genomes_project 6 90263722 90279041 - Podxl2 protein_coding processed_transcript MGP_129S1SvImJ_T0078787.1 MGP_129S1SvImJ_G0031015.1 mouse_genomes_project 6 90278050 90288697 - Podxl2 protein_coding retained_intron MGP_129S1SvImJ_T0078788.1 MGP_129S1SvImJ_G0031015.1 mouse_genomes_project 6 90278585 90288085 - Podxl2 protein_coding retained_intron MGP_129S1SvImJ_T0004983.1 MGP_129S1SvImJ_G0004275.1 mouse_genomes_project 6 53486832 53490877 - 9530036M11Rik antisense antisense MGP_129S1SvImJ_T0078958.1 MGP_129S1SvImJ_G0031053.1 mouse_genomes_project 6 93527876 93529780 + 4930590J08Rik protein_coding retained_intron MGP_129S1SvImJ_T0078959.1 MGP_129S1SvImJ_G0031053.1 mouse_genomes_project 6 93529300 93577371 + MGP_129S1SvImJ_P0078959 4930590J08Rik protein_coding protein_coding MGP_129S1SvImJ_T0078960.1 MGP_129S1SvImJ_G0031053.1 mouse_genomes_project 6 93540193 93577286 + MGP_129S1SvImJ_P0078960 4930590J08Rik protein_coding protein_coding MGP_129S1SvImJ_T0078961.1 MGP_129S1SvImJ_G0031053.1 mouse_genomes_project 6 93570909 93576676 + MGP_129S1SvImJ_P0078961 4930590J08Rik protein_coding protein_coding MGP_129S1SvImJ_T0015300.1 MGP_129S1SvImJ_G0013389.1 mouse_genomes_project 6 20267595 20268781 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077342.1 MGP_129S1SvImJ_G0030692.1 mouse_genomes_project 6 47331251 47355211 + MGP_129S1SvImJ_P0077342 Krba1 protein_coding protein_coding MGP_129S1SvImJ_T0077343.1 MGP_129S1SvImJ_G0030692.1 mouse_genomes_project 6 47331279 47352570 + MGP_129S1SvImJ_P0077343 Krba1 protein_coding protein_coding MGP_129S1SvImJ_T0077344.1 MGP_129S1SvImJ_G0030692.1 mouse_genomes_project 6 47331295 47336350 + Krba1 protein_coding retained_intron MGP_129S1SvImJ_T0077345.1 MGP_129S1SvImJ_G0030692.1 mouse_genomes_project 6 47331297 47352565 + MGP_129S1SvImJ_P0077345 Krba1 protein_coding protein_coding MGP_129S1SvImJ_T0077346.1 MGP_129S1SvImJ_G0030692.1 mouse_genomes_project 6 47331323 47355211 + MGP_129S1SvImJ_P0077346 Krba1 protein_coding protein_coding MGP_129S1SvImJ_T0077347.1 MGP_129S1SvImJ_G0030692.1 mouse_genomes_project 6 47331363 47339133 + Krba1 protein_coding processed_transcript MGP_129S1SvImJ_T0077348.1 MGP_129S1SvImJ_G0030692.1 mouse_genomes_project 6 47331531 47353132 + MGP_129S1SvImJ_P0077348 Krba1 protein_coding protein_coding MGP_129S1SvImJ_T0077349.1 MGP_129S1SvImJ_G0030692.1 mouse_genomes_project 6 47339708 47344203 + Krba1 protein_coding processed_transcript MGP_129S1SvImJ_T0077350.1 MGP_129S1SvImJ_G0030692.1 mouse_genomes_project 6 47344864 47355211 + Krba1 protein_coding retained_intron MGP_129S1SvImJ_T0077351.1 MGP_129S1SvImJ_G0030692.1 mouse_genomes_project 6 47349001 47355447 + Krba1 protein_coding retained_intron MGP_129S1SvImJ_T0077795.1 MGP_129S1SvImJ_G0030817.1 mouse_genomes_project 6 58196012 58299167 + MGP_129S1SvImJ_P0077795 Abcg2 protein_coding protein_coding MGP_129S1SvImJ_T0077796.1 MGP_129S1SvImJ_G0030817.1 mouse_genomes_project 6 58211184 58334429 + MGP_129S1SvImJ_P0077796 Abcg2 protein_coding protein_coding MGP_129S1SvImJ_T0077797.1 MGP_129S1SvImJ_G0030817.1 mouse_genomes_project 6 58272689 58299420 + Abcg2 protein_coding retained_intron MGP_129S1SvImJ_T0077798.1 MGP_129S1SvImJ_G0030817.1 mouse_genomes_project 6 58272703 58299881 + MGP_129S1SvImJ_P0077798 Abcg2 protein_coding protein_coding MGP_129S1SvImJ_T0077799.1 MGP_129S1SvImJ_G0030817.1 mouse_genomes_project 6 58272703 58331652 + MGP_129S1SvImJ_P0077799 Abcg2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077800.1 MGP_129S1SvImJ_G0030817.1 mouse_genomes_project 6 58272707 58329327 + MGP_129S1SvImJ_P0077800 Abcg2 protein_coding protein_coding MGP_129S1SvImJ_T0077801.1 MGP_129S1SvImJ_G0030817.1 mouse_genomes_project 6 58272707 58331294 + MGP_129S1SvImJ_P0077801 Abcg2 protein_coding protein_coding MGP_129S1SvImJ_T0077802.1 MGP_129S1SvImJ_G0030817.1 mouse_genomes_project 6 58272725 58299881 + MGP_129S1SvImJ_P0077802 Abcg2 protein_coding protein_coding MGP_129S1SvImJ_T0077803.1 MGP_129S1SvImJ_G0030817.1 mouse_genomes_project 6 58298045 58299383 + Abcg2 protein_coding retained_intron MGP_129S1SvImJ_T0077804.1 MGP_129S1SvImJ_G0030817.1 mouse_genomes_project 6 58309066 58331158 + MGP_129S1SvImJ_P0077804 Abcg2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077805.1 MGP_129S1SvImJ_G0030817.1 mouse_genomes_project 6 58314330 58323460 + Abcg2 protein_coding retained_intron MGP_129S1SvImJ_T0015601.1 MGP_129S1SvImJ_G0013690.1 mouse_genomes_project 6 126265382 126265533 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077486.1 MGP_129S1SvImJ_G0030727.1 mouse_genomes_project 6 49198872 49294083 + MGP_129S1SvImJ_P0077486 Mpp6 protein_coding protein_coding MGP_129S1SvImJ_T0077487.1 MGP_129S1SvImJ_G0030727.1 mouse_genomes_project 6 49198880 49294072 + MGP_129S1SvImJ_P0077487 Mpp6 protein_coding protein_coding MGP_129S1SvImJ_T0077488.1 MGP_129S1SvImJ_G0030727.1 mouse_genomes_project 6 49198909 49294424 + MGP_129S1SvImJ_P0077488 Mpp6 protein_coding protein_coding MGP_129S1SvImJ_T0077489.1 MGP_129S1SvImJ_G0030727.1 mouse_genomes_project 6 49198911 49202447 + Mpp6 protein_coding retained_intron MGP_129S1SvImJ_T0077490.1 MGP_129S1SvImJ_G0030727.1 mouse_genomes_project 6 49199014 49293909 + MGP_129S1SvImJ_P0077490 Mpp6 protein_coding protein_coding MGP_129S1SvImJ_T0077491.1 MGP_129S1SvImJ_G0030727.1 mouse_genomes_project 6 49199038 49255087 + MGP_129S1SvImJ_P0077491 Mpp6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077492.1 MGP_129S1SvImJ_G0030727.1 mouse_genomes_project 6 49199491 49276262 + MGP_129S1SvImJ_P0077492 Mpp6 protein_coding protein_coding MGP_129S1SvImJ_T0077493.1 MGP_129S1SvImJ_G0030727.1 mouse_genomes_project 6 49275948 49292198 + Mpp6 protein_coding processed_transcript MGP_129S1SvImJ_T0077496.1 MGP_129S1SvImJ_G0030727.1 mouse_genomes_project 6 49290054 49293812 + Mpp6 protein_coding retained_intron MGP_129S1SvImJ_T0002018.1 MGP_129S1SvImJ_G0001931.1 mouse_genomes_project 6 57372014 57374741 + TEC TEC MGP_129S1SvImJ_T0000143.1 MGP_129S1SvImJ_G0000110.1 mouse_genomes_project 6 67869589 67870303 + MGP_129S1SvImJ_P0000143 Igkv1-132 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0015435.1 MGP_129S1SvImJ_G0013524.1 mouse_genomes_project 6 67822698 67823753 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076935.1 MGP_129S1SvImJ_G0030569.1 mouse_genomes_project 6 33315316 33391366 + MGP_129S1SvImJ_P0076935 Nup205 protein_coding protein_coding MGP_129S1SvImJ_T0076936.1 MGP_129S1SvImJ_G0030569.1 mouse_genomes_project 6 33315325 33391366 + MGP_129S1SvImJ_P0076936 Nup205 protein_coding protein_coding MGP_129S1SvImJ_T0076937.1 MGP_129S1SvImJ_G0030569.1 mouse_genomes_project 6 33315511 33346382 + Nup205 protein_coding retained_intron MGP_129S1SvImJ_T0076938.1 MGP_129S1SvImJ_G0030569.1 mouse_genomes_project 6 33315524 33391360 + MGP_129S1SvImJ_P0076938 Nup205 protein_coding protein_coding MGP_129S1SvImJ_T0076939.1 MGP_129S1SvImJ_G0030569.1 mouse_genomes_project 6 33345775 33391366 + Nup205 protein_coding processed_transcript MGP_129S1SvImJ_T0076940.1 MGP_129S1SvImJ_G0030569.1 mouse_genomes_project 6 33366457 33381939 + Nup205 protein_coding retained_intron MGP_129S1SvImJ_T0076941.1 MGP_129S1SvImJ_G0030569.1 mouse_genomes_project 6 33388943 33390242 + Nup205 protein_coding retained_intron MGP_129S1SvImJ_T0010774.1 MGP_129S1SvImJ_G0008890.1 mouse_genomes_project 6 28022848 28022918 - Mir183 miRNA miRNA MGP_129S1SvImJ_T0002072.1 MGP_129S1SvImJ_G0001985.1 mouse_genomes_project 6 87893371 87896832 + TEC TEC MGP_129S1SvImJ_T0077897.1 MGP_129S1SvImJ_G0030840.1 mouse_genomes_project 6 66731153 66732189 - MGP_129S1SvImJ_P0077897 Vmn1r38 protein_coding protein_coding MGP_129S1SvImJ_T0078282.1 MGP_129S1SvImJ_G0030923.1 mouse_genomes_project 6 84142312 84156338 + MGP_129S1SvImJ_P0078282 Rtkn protein_coding protein_coding MGP_129S1SvImJ_T0078283.1 MGP_129S1SvImJ_G0030923.1 mouse_genomes_project 6 84142661 84159350 + MGP_129S1SvImJ_P0078283 Rtkn protein_coding protein_coding MGP_129S1SvImJ_T0078284.1 MGP_129S1SvImJ_G0030923.1 mouse_genomes_project 6 84143950 84159350 + MGP_129S1SvImJ_P0078284 Rtkn protein_coding protein_coding MGP_129S1SvImJ_T0078285.1 MGP_129S1SvImJ_G0030923.1 mouse_genomes_project 6 84143971 84159350 + MGP_129S1SvImJ_P0078285 Rtkn protein_coding protein_coding MGP_129S1SvImJ_T0078286.1 MGP_129S1SvImJ_G0030923.1 mouse_genomes_project 6 84145036 84159355 + MGP_129S1SvImJ_P0078286 Rtkn protein_coding unknown_likely_coding MGP_129S1SvImJ_T0078287.1 MGP_129S1SvImJ_G0030923.1 mouse_genomes_project 6 84149183 84154934 + MGP_129S1SvImJ_P0078287 Rtkn protein_coding protein_coding MGP_129S1SvImJ_T0078288.1 MGP_129S1SvImJ_G0030923.1 mouse_genomes_project 6 84149355 84154456 + MGP_129S1SvImJ_P0078288 Rtkn protein_coding protein_coding MGP_129S1SvImJ_T0078289.1 MGP_129S1SvImJ_G0030923.1 mouse_genomes_project 6 84154615 84157020 + Rtkn protein_coding retained_intron MGP_129S1SvImJ_T0078291.1 MGP_129S1SvImJ_G0030923.1 mouse_genomes_project 6 84157525 84158979 + Rtkn protein_coding retained_intron MGP_129S1SvImJ_T0002750.1 MGP_129S1SvImJ_G0002625.1 mouse_genomes_project 6 39559873 39560158 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0002118.1 MGP_129S1SvImJ_G0002031.1 mouse_genomes_project 6 101622446 101626220 - TEC TEC MGP_129S1SvImJ_T0102643.1 MGP_129S1SvImJ_G0040476.1 mouse_genomes_project 6 132572502 132572616 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0076742.1 MGP_129S1SvImJ_G0030537.1 mouse_genomes_project 6 28366952 28398711 - MGP_129S1SvImJ_P0076742 Tmem209 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076743.1 MGP_129S1SvImJ_G0030537.1 mouse_genomes_project 6 28368696 28398722 - MGP_129S1SvImJ_P0076743 Tmem209 protein_coding protein_coding MGP_129S1SvImJ_T0076744.1 MGP_129S1SvImJ_G0030537.1 mouse_genomes_project 6 28368921 28398723 - MGP_129S1SvImJ_P0076744 Tmem209 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076745.1 MGP_129S1SvImJ_G0030537.1 mouse_genomes_project 6 28369127 28398790 - MGP_129S1SvImJ_P0076745 Tmem209 protein_coding protein_coding MGP_129S1SvImJ_T0076746.1 MGP_129S1SvImJ_G0030537.1 mouse_genomes_project 6 28370314 28398725 - MGP_129S1SvImJ_P0076746 Tmem209 protein_coding protein_coding MGP_129S1SvImJ_T0076747.1 MGP_129S1SvImJ_G0030537.1 mouse_genomes_project 6 28370700 28398722 - MGP_129S1SvImJ_P0076747 Tmem209 protein_coding protein_coding MGP_129S1SvImJ_T0076748.1 MGP_129S1SvImJ_G0030537.1 mouse_genomes_project 6 28378255 28380079 - Tmem209 protein_coding retained_intron MGP_129S1SvImJ_T0076749.1 MGP_129S1SvImJ_G0030537.1 mouse_genomes_project 6 28389902 28398756 - MGP_129S1SvImJ_P0076749 Tmem209 protein_coding protein_coding MGP_129S1SvImJ_T0076750.1 MGP_129S1SvImJ_G0030537.1 mouse_genomes_project 6 28393746 28398729 - Tmem209 protein_coding retained_intron MGP_129S1SvImJ_T0076751.1 MGP_129S1SvImJ_G0030537.1 mouse_genomes_project 6 28394758 28398731 - MGP_129S1SvImJ_P0076751 Tmem209 protein_coding protein_coding MGP_129S1SvImJ_T0005003.1 MGP_129S1SvImJ_G0004292.1 mouse_genomes_project 6 80782310 80874553 - Gm4409 antisense antisense MGP_129S1SvImJ_T0001930.1 MGP_129S1SvImJ_G0001843.1 mouse_genomes_project 6 1256742 1258534 + TEC TEC MGP_129S1SvImJ_T0080666.1 MGP_129S1SvImJ_G0031427.1 mouse_genomes_project 6 141289782 141316680 + BC049715 protein_coding retained_intron MGP_129S1SvImJ_T0080667.1 MGP_129S1SvImJ_G0031427.1 mouse_genomes_project 6 141290136 141322338 + MGP_129S1SvImJ_P0080667 BC049715 protein_coding protein_coding MGP_129S1SvImJ_T0080668.1 MGP_129S1SvImJ_G0031427.1 mouse_genomes_project 6 141290991 141323076 + MGP_129S1SvImJ_P0080668 BC049715 protein_coding protein_coding MGP_129S1SvImJ_T0080669.1 MGP_129S1SvImJ_G0031427.1 mouse_genomes_project 6 141322303 141323047 + MGP_129S1SvImJ_P0080669 BC049715 protein_coding protein_coding MGP_129S1SvImJ_T0100024.1 MGP_129S1SvImJ_G0038091.1 mouse_genomes_project 6 123422569 123422671 + Gm24391 snRNA snRNA MGP_129S1SvImJ_T0078278.1 MGP_129S1SvImJ_G0030922.1 mouse_genomes_project 6 84129205 84132865 - MGP_129S1SvImJ_P0078278 Ino80b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078279.1 MGP_129S1SvImJ_G0030922.1 mouse_genomes_project 6 84129205 84132865 - MGP_129S1SvImJ_P0078279 Ino80b protein_coding protein_coding MGP_129S1SvImJ_T0078280.1 MGP_129S1SvImJ_G0030922.1 mouse_genomes_project 6 84129268 84132463 - MGP_129S1SvImJ_P0078280 Ino80b protein_coding protein_coding MGP_129S1SvImJ_T0078281.1 MGP_129S1SvImJ_G0030922.1 mouse_genomes_project 6 84131846 84132302 - Ino80b protein_coding retained_intron MGP_129S1SvImJ_T0004988.1 MGP_129S1SvImJ_G0004280.1 mouse_genomes_project 6 58605331 58642704 + BB365896 antisense antisense MGP_129S1SvImJ_T0001952.1 MGP_129S1SvImJ_G0001865.1 mouse_genomes_project 6 18690939 18697582 + TEC TEC MGP_129S1SvImJ_T0078122.1 MGP_129S1SvImJ_G0030885.1 mouse_genomes_project 6 73571217 73572359 - MGP_129S1SvImJ_P0078122 protein_coding protein_coding MGP_129S1SvImJ_T0078123.1 MGP_129S1SvImJ_G0030885.1 mouse_genomes_project 6 73571223 73572173 - MGP_129S1SvImJ_P0078123 protein_coding protein_coding MGP_129S1SvImJ_T0078124.1 MGP_129S1SvImJ_G0030885.1 mouse_genomes_project 6 73571231 73572619 - MGP_129S1SvImJ_P0078124 protein_coding protein_coding MGP_129S1SvImJ_T0078125.1 MGP_129S1SvImJ_G0030885.1 mouse_genomes_project 6 73571525 73572270 - MGP_129S1SvImJ_P0078125 protein_coding protein_coding MGP_129S1SvImJ_T0099991.1 MGP_129S1SvImJ_G0038058.1 mouse_genomes_project 6 33387364 33387520 + Gm23435 snRNA snRNA MGP_129S1SvImJ_T0077453.1 MGP_129S1SvImJ_G0030719.1 mouse_genomes_project 6 48019506 48021337 + Gpnmb protein_coding retained_intron MGP_129S1SvImJ_T0077454.1 MGP_129S1SvImJ_G0030719.1 mouse_genomes_project 6 48019575 48041204 + MGP_129S1SvImJ_P0077454 Gpnmb protein_coding protein_coding MGP_129S1SvImJ_T0077455.1 MGP_129S1SvImJ_G0030719.1 mouse_genomes_project 6 48019625 48025933 + MGP_129S1SvImJ_P0077455 Gpnmb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077456.1 MGP_129S1SvImJ_G0030719.1 mouse_genomes_project 6 48019637 48056183 + MGP_129S1SvImJ_P0077456 Gpnmb protein_coding protein_coding MGP_129S1SvImJ_T0077457.1 MGP_129S1SvImJ_G0030719.1 mouse_genomes_project 6 48030442 48031370 + Gpnmb protein_coding retained_intron MGP_129S1SvImJ_T0080542.1 MGP_129S1SvImJ_G0031401.1 mouse_genomes_project 6 138077449 138081325 - MGP_129S1SvImJ_P0080542 Kap protein_coding protein_coding MGP_129S1SvImJ_T0080543.1 MGP_129S1SvImJ_G0031401.1 mouse_genomes_project 6 138077552 138081236 - MGP_129S1SvImJ_P0080543 Kap protein_coding protein_coding MGP_129S1SvImJ_T0101235.1 MGP_129S1SvImJ_G0039302.1 mouse_genomes_project 6 27007998 27008129 + Gm26021 snoRNA snoRNA MGP_129S1SvImJ_T0000318.1 MGP_129S1SvImJ_G0000260.1 mouse_genomes_project 6 68864284 68864978 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0078032.1 MGP_129S1SvImJ_G0030868.1 mouse_genomes_project 6 72737085 72766587 - MGP_129S1SvImJ_P0078032 Atoh8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078033.1 MGP_129S1SvImJ_G0030868.1 mouse_genomes_project 6 72737085 72767627 - MGP_129S1SvImJ_P0078033 Atoh8 protein_coding protein_coding MGP_129S1SvImJ_T0078034.1 MGP_129S1SvImJ_G0030868.1 mouse_genomes_project 6 72754643 72767280 - Atoh8 protein_coding processed_transcript MGP_129S1SvImJ_T0101264.1 MGP_129S1SvImJ_G0039331.1 mouse_genomes_project 6 86284512 86284628 + Gm22893 snoRNA snoRNA MGP_129S1SvImJ_T0078262.1 MGP_129S1SvImJ_G0030918.1 mouse_genomes_project 6 84105199 84117379 + MGP_129S1SvImJ_P0078262 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079177.1 MGP_129S1SvImJ_G0031099.1 mouse_genomes_project 6 110363811 110441191 - MGP_129S1SvImJ_P0079177 Sumf1 protein_coding protein_coding MGP_129S1SvImJ_T0079178.1 MGP_129S1SvImJ_G0031099.1 mouse_genomes_project 6 110365130 110383107 - Sumf1 protein_coding processed_transcript MGP_129S1SvImJ_T0079179.1 MGP_129S1SvImJ_G0031099.1 mouse_genomes_project 6 110365259 110441165 - MGP_129S1SvImJ_P0079179 Sumf1 protein_coding protein_coding MGP_129S1SvImJ_T0079180.1 MGP_129S1SvImJ_G0031099.1 mouse_genomes_project 6 110365259 110441165 - MGP_129S1SvImJ_P0079180 Sumf1 protein_coding protein_coding MGP_129S1SvImJ_T0079181.1 MGP_129S1SvImJ_G0031099.1 mouse_genomes_project 6 110374779 110400764 - MGP_129S1SvImJ_P0079181 Sumf1 protein_coding protein_coding MGP_129S1SvImJ_T0079182.1 MGP_129S1SvImJ_G0031099.1 mouse_genomes_project 6 110400381 110408138 - Sumf1 protein_coding retained_intron MGP_129S1SvImJ_T0010770.1 MGP_129S1SvImJ_G0008886.1 mouse_genomes_project 6 27188469 27188558 + Gm26220 miRNA miRNA MGP_129S1SvImJ_T0001928.1 MGP_129S1SvImJ_G0001841.1 mouse_genomes_project 6 17636 19750 - TEC TEC MGP_129S1SvImJ_T0015366.1 MGP_129S1SvImJ_G0013455.1 mouse_genomes_project 6 48917081 48919165 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005095.1 MGP_129S1SvImJ_G0004349.1 mouse_genomes_project 6 123881308 123917439 + Gm43915 antisense antisense MGP_129S1SvImJ_T0000190.1 MGP_129S1SvImJ_G0000145.1 mouse_genomes_project 6 69849355 69849834 - MGP_129S1SvImJ_P0000190 Igkv4-59 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0005076.1 MGP_129S1SvImJ_G0004334.1 mouse_genomes_project 6 114720861 114724083 - 5031434C07Rik antisense antisense MGP_129S1SvImJ_T0005077.1 MGP_129S1SvImJ_G0004334.1 mouse_genomes_project 6 114721103 114724084 - 5031434C07Rik antisense antisense MGP_129S1SvImJ_T0076513.1 MGP_129S1SvImJ_G0030496.1 mouse_genomes_project 6 22163586 22171239 + MGP_129S1SvImJ_P0076513 Lmod2 protein_coding protein_coding MGP_129S1SvImJ_T0002753.1 MGP_129S1SvImJ_G0002628.1 mouse_genomes_project 6 39586121 39586381 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0015260.1 MGP_129S1SvImJ_G0013349.1 mouse_genomes_project 6 4092338 4093283 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015406.1 MGP_129S1SvImJ_G0013495.1 mouse_genomes_project 6 65096950 65097744 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099989.1 MGP_129S1SvImJ_G0038056.1 mouse_genomes_project 6 27803769 27803876 + Gm24536 snRNA snRNA MGP_129S1SvImJ_T0079489.1 MGP_129S1SvImJ_G0031153.1 mouse_genomes_project 6 118371085 118403278 - MGP_129S1SvImJ_P0079489 Tmem40 protein_coding protein_coding MGP_129S1SvImJ_T0079490.1 MGP_129S1SvImJ_G0031153.1 mouse_genomes_project 6 118371097 118376721 - Tmem40 protein_coding processed_transcript MGP_129S1SvImJ_T0079491.1 MGP_129S1SvImJ_G0031153.1 mouse_genomes_project 6 118371487 118377063 - Tmem40 protein_coding retained_intron MGP_129S1SvImJ_T0079492.1 MGP_129S1SvImJ_G0031153.1 mouse_genomes_project 6 118371619 118408831 - MGP_129S1SvImJ_P0079492 Tmem40 protein_coding protein_coding MGP_129S1SvImJ_T0102633.1 MGP_129S1SvImJ_G0040466.1 mouse_genomes_project 6 91233429 91234371 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0101751.1 MGP_129S1SvImJ_G0039740.1 mouse_genomes_project 6 91617649 91756146 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0005114.1 MGP_129S1SvImJ_G0004366.1 mouse_genomes_project 6 131957403 131959980 + Gm26770 antisense antisense MGP_129S1SvImJ_T0010819.1 MGP_129S1SvImJ_G0008935.1 mouse_genomes_project 6 119332392 119332462 - Mir7043 miRNA miRNA MGP_129S1SvImJ_T0000168.1 MGP_129S1SvImJ_G0000129.1 mouse_genomes_project 6 68753329 68754108 + MGP_129S1SvImJ_P0000168 Igkv1-99 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000169.1 MGP_129S1SvImJ_G0000129.1 mouse_genomes_project 6 68753343 68754108 + MGP_129S1SvImJ_P0000169 Igkv1-99 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0015595.1 MGP_129S1SvImJ_G0013684.1 mouse_genomes_project 6 125371598 125371980 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000302.1 MGP_129S1SvImJ_G0000244.1 mouse_genomes_project 6 68234528 68234994 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0002002.1 MGP_129S1SvImJ_G0001915.1 mouse_genomes_project 6 45579050 45582800 + TEC TEC MGP_129S1SvImJ_T0010823.1 MGP_129S1SvImJ_G0008939.1 mouse_genomes_project 6 123714207 123714304 - Gm25193 miRNA miRNA MGP_129S1SvImJ_T0077412.1 MGP_129S1SvImJ_G0030709.1 mouse_genomes_project 6 47676039 47682055 + MGP_129S1SvImJ_P0077412 Gimap7 protein_coding protein_coding MGP_129S1SvImJ_T0077414.1 MGP_129S1SvImJ_G0030709.1 mouse_genomes_project 6 47676075 47681158 + MGP_129S1SvImJ_P0077414 Gimap7 protein_coding protein_coding MGP_129S1SvImJ_T0077415.1 MGP_129S1SvImJ_G0030709.1 mouse_genomes_project 6 47676083 47677089 + Gimap7 protein_coding retained_intron MGP_129S1SvImJ_T0015625.1 MGP_129S1SvImJ_G0013714.1 mouse_genomes_project 6 132059743 132061017 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078390.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 84909193 84970794 + MGP_129S1SvImJ_P0078390 Zfp638 protein_coding protein_coding MGP_129S1SvImJ_T0078391.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 84909194 84986720 + MGP_129S1SvImJ_P0078391 Zfp638 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078392.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 84956367 85038853 + MGP_129S1SvImJ_P0078392 Zfp638 protein_coding protein_coding MGP_129S1SvImJ_T0078393.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 84956371 84973515 + Zfp638 protein_coding retained_intron MGP_129S1SvImJ_T0078394.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 84956371 84986696 + Zfp638 protein_coding processed_transcript MGP_129S1SvImJ_T0078395.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 84956373 85005675 + MGP_129S1SvImJ_P0078395 Zfp638 protein_coding protein_coding MGP_129S1SvImJ_T0078396.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 84956374 85014421 + MGP_129S1SvImJ_P0078396 Zfp638 protein_coding protein_coding MGP_129S1SvImJ_T0078397.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 84956390 85036185 + MGP_129S1SvImJ_P0078397 Zfp638 protein_coding protein_coding MGP_129S1SvImJ_T0078398.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 84956390 85036183 + MGP_129S1SvImJ_P0078398 Zfp638 protein_coding protein_coding MGP_129S1SvImJ_T0078399.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 84956392 85035963 + MGP_129S1SvImJ_P0078399 Zfp638 protein_coding protein_coding MGP_129S1SvImJ_T0078400.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 84956395 84957897 + Zfp638 protein_coding retained_intron MGP_129S1SvImJ_T0078401.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 84956397 84986732 + Zfp638 protein_coding processed_transcript MGP_129S1SvImJ_T0078402.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 84970526 85035937 + MGP_129S1SvImJ_P0078402 Zfp638 protein_coding protein_coding MGP_129S1SvImJ_T0078403.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 84970526 85036185 + MGP_129S1SvImJ_P0078403 Zfp638 protein_coding protein_coding MGP_129S1SvImJ_T0078404.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 84986338 84988418 + Zfp638 protein_coding retained_intron MGP_129S1SvImJ_T0078405.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 84991596 85018118 + MGP_129S1SvImJ_P0078405 Zfp638 protein_coding protein_coding MGP_129S1SvImJ_T0078406.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 85010933 85015733 + Zfp638 protein_coding retained_intron MGP_129S1SvImJ_T0078407.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 85014476 85016705 + Zfp638 protein_coding retained_intron MGP_129S1SvImJ_T0078408.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 85028923 85031151 + Zfp638 protein_coding retained_intron MGP_129S1SvImJ_T0078409.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 85032915 85036183 + Zfp638 protein_coding retained_intron MGP_129S1SvImJ_T0078410.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 85032915 85035887 + Zfp638 protein_coding retained_intron MGP_129S1SvImJ_T0078411.1 MGP_129S1SvImJ_G0030943.1 mouse_genomes_project 6 85033667 85035931 + Zfp638 protein_coding retained_intron MGP_129S1SvImJ_T0080015.1 MGP_129S1SvImJ_G0031261.1 mouse_genomes_project 6 128015883 128017418 + Phb2 protein_coding retained_intron MGP_129S1SvImJ_T0080016.1 MGP_129S1SvImJ_G0031261.1 mouse_genomes_project 6 128015883 128016616 + Phb2 protein_coding retained_intron MGP_129S1SvImJ_T0080017.1 MGP_129S1SvImJ_G0031261.1 mouse_genomes_project 6 128015883 128020497 + Phb2 protein_coding retained_intron MGP_129S1SvImJ_T0080018.1 MGP_129S1SvImJ_G0031261.1 mouse_genomes_project 6 128015883 128020497 + MGP_129S1SvImJ_P0080018 Phb2 protein_coding protein_coding MGP_129S1SvImJ_T0080019.1 MGP_129S1SvImJ_G0031261.1 mouse_genomes_project 6 128016313 128018348 + MGP_129S1SvImJ_P0080019 Phb2 protein_coding protein_coding MGP_129S1SvImJ_T0080020.1 MGP_129S1SvImJ_G0031261.1 mouse_genomes_project 6 128016669 128020187 + MGP_129S1SvImJ_P0080020 Phb2 protein_coding protein_coding MGP_129S1SvImJ_T0080021.1 MGP_129S1SvImJ_G0031261.1 mouse_genomes_project 6 128018894 128020497 + Phb2 protein_coding retained_intron MGP_129S1SvImJ_T0080022.1 MGP_129S1SvImJ_G0031261.1 mouse_genomes_project 6 128018909 128020086 + Phb2 protein_coding processed_transcript MGP_129S1SvImJ_T0015326.1 MGP_129S1SvImJ_G0013415.1 mouse_genomes_project 6 38257151 38257725 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076990.1 MGP_129S1SvImJ_G0030583.1 mouse_genomes_project 6 36579568 36591996 - MGP_129S1SvImJ_P0076990 Zc3hav1l protein_coding protein_coding MGP_129S1SvImJ_T0078322.1 MGP_129S1SvImJ_G0030929.1 mouse_genomes_project 6 84331293 84339961 + Mob1a protein_coding processed_transcript MGP_129S1SvImJ_T0078323.1 MGP_129S1SvImJ_G0030929.1 mouse_genomes_project 6 84331311 84337732 + MGP_129S1SvImJ_P0078323 Mob1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078324.1 MGP_129S1SvImJ_G0030929.1 mouse_genomes_project 6 84331355 84349276 + MGP_129S1SvImJ_P0078324 Mob1a protein_coding protein_coding MGP_129S1SvImJ_T0078325.1 MGP_129S1SvImJ_G0030929.1 mouse_genomes_project 6 84331529 84349201 + MGP_129S1SvImJ_P0078325 Mob1a protein_coding protein_coding MGP_129S1SvImJ_T0077167.1 MGP_129S1SvImJ_G0030635.1 mouse_genomes_project 6 40290808 40294836 - MGP_129S1SvImJ_P0077167 Olfr459 protein_coding protein_coding MGP_129S1SvImJ_T0077168.1 MGP_129S1SvImJ_G0030635.1 mouse_genomes_project 6 40290808 40291917 - MGP_129S1SvImJ_P0077168 Olfr459 protein_coding protein_coding MGP_129S1SvImJ_T0002005.1 MGP_129S1SvImJ_G0001918.1 mouse_genomes_project 6 50046692 50047658 + TEC TEC MGP_129S1SvImJ_T0001968.1 MGP_129S1SvImJ_G0001881.1 mouse_genomes_project 6 29200935 29203664 + TEC TEC MGP_129S1SvImJ_T0078541.1 MGP_129S1SvImJ_G0030973.1 mouse_genomes_project 6 87649433 87657544 + MGP_129S1SvImJ_P0078541 Snrpg protein_coding protein_coding MGP_129S1SvImJ_T0078542.1 MGP_129S1SvImJ_G0030973.1 mouse_genomes_project 6 87649671 87654951 + Snrpg protein_coding retained_intron MGP_129S1SvImJ_T0078543.1 MGP_129S1SvImJ_G0030973.1 mouse_genomes_project 6 87649700 87657123 + Snrpg protein_coding processed_transcript MGP_129S1SvImJ_T0078544.1 MGP_129S1SvImJ_G0030973.1 mouse_genomes_project 6 87649733 87657074 + Snrpg protein_coding processed_transcript MGP_129S1SvImJ_T0079659.1 MGP_129S1SvImJ_G0031187.1 mouse_genomes_project 6 121213899 121232414 - MGP_129S1SvImJ_P0079659 Zfp9 protein_coding protein_coding MGP_129S1SvImJ_T0079660.1 MGP_129S1SvImJ_G0031187.1 mouse_genomes_project 6 121219922 121221517 - Zfp9 protein_coding retained_intron MGP_129S1SvImJ_T0001993.1 MGP_129S1SvImJ_G0001906.1 mouse_genomes_project 6 44658160 44661972 + TEC TEC MGP_129S1SvImJ_T0078580.1 MGP_129S1SvImJ_G0030977.1 mouse_genomes_project 6 87723501 87758037 + MGP_129S1SvImJ_P0078580 C87436 protein_coding protein_coding MGP_129S1SvImJ_T0078581.1 MGP_129S1SvImJ_G0030977.1 mouse_genomes_project 6 87723516 87731792 + MGP_129S1SvImJ_P0078581 C87436 protein_coding protein_coding MGP_129S1SvImJ_T0078582.1 MGP_129S1SvImJ_G0030977.1 mouse_genomes_project 6 87723802 87758034 + MGP_129S1SvImJ_P0078582 C87436 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0078583.1 MGP_129S1SvImJ_G0030977.1 mouse_genomes_project 6 87723819 87758037 + MGP_129S1SvImJ_P0078583 C87436 protein_coding protein_coding MGP_129S1SvImJ_T0078584.1 MGP_129S1SvImJ_G0030977.1 mouse_genomes_project 6 87723819 87758037 + MGP_129S1SvImJ_P0078584 C87436 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078585.1 MGP_129S1SvImJ_G0030977.1 mouse_genomes_project 6 87723835 87724615 + C87436 protein_coding processed_transcript MGP_129S1SvImJ_T0078586.1 MGP_129S1SvImJ_G0030977.1 mouse_genomes_project 6 87723854 87758037 + MGP_129S1SvImJ_P0078586 C87436 protein_coding protein_coding MGP_129S1SvImJ_T0078587.1 MGP_129S1SvImJ_G0030977.1 mouse_genomes_project 6 87729801 87761149 + MGP_129S1SvImJ_P0078587 C87436 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078588.1 MGP_129S1SvImJ_G0030977.1 mouse_genomes_project 6 87751694 87757596 + C87436 protein_coding processed_transcript MGP_129S1SvImJ_T0015522.1 MGP_129S1SvImJ_G0013611.1 mouse_genomes_project 6 97731847 97733036 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008536.1 MGP_129S1SvImJ_G0006914.1 mouse_genomes_project 6 26732198 26787534 + Gm3294 lincRNA lincRNA MGP_129S1SvImJ_T0002076.1 MGP_129S1SvImJ_G0001989.1 mouse_genomes_project 6 88292759 88294555 + TEC TEC MGP_129S1SvImJ_T0076946.1 MGP_129S1SvImJ_G0030572.1 mouse_genomes_project 6 33635932 33673158 - MGP_129S1SvImJ_P0076946 Mtpn protein_coding protein_coding MGP_129S1SvImJ_T0076947.1 MGP_129S1SvImJ_G0030572.1 mouse_genomes_project 6 33650495 33673069 - MGP_129S1SvImJ_P0076947 Mtpn protein_coding protein_coding MGP_129S1SvImJ_T0000159.1 MGP_129S1SvImJ_G0000122.1 mouse_genomes_project 6 68227804 68228278 + MGP_129S1SvImJ_P0000159 Igkv9-120 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0010801.1 MGP_129S1SvImJ_G0008917.1 mouse_genomes_project 6 87003783 87003878 - Mir6375 miRNA miRNA MGP_129S1SvImJ_T0002210.1 MGP_129S1SvImJ_G0002122.1 mouse_genomes_project 6 153461765 153467211 - TEC TEC MGP_129S1SvImJ_T0101237.1 MGP_129S1SvImJ_G0039304.1 mouse_genomes_project 6 37362994 37363120 + Gm23010 snoRNA snoRNA MGP_129S1SvImJ_T0076918.1 MGP_129S1SvImJ_G0030566.1 mouse_genomes_project 6 33035302 33057029 + MGP_129S1SvImJ_P0076918 Stra8 protein_coding protein_coding MGP_129S1SvImJ_T0076919.1 MGP_129S1SvImJ_G0030566.1 mouse_genomes_project 6 33036099 33057027 + MGP_129S1SvImJ_P0076919 Stra8 protein_coding protein_coding MGP_129S1SvImJ_T0076920.1 MGP_129S1SvImJ_G0030566.1 mouse_genomes_project 6 33036143 33050866 + MGP_129S1SvImJ_P0076920 Stra8 protein_coding protein_coding MGP_129S1SvImJ_T0076921.1 MGP_129S1SvImJ_G0030566.1 mouse_genomes_project 6 33036149 33057027 + MGP_129S1SvImJ_P0076921 Stra8 protein_coding protein_coding MGP_129S1SvImJ_T0077774.1 MGP_129S1SvImJ_G0030804.1 mouse_genomes_project 6 57247740 57350607 - MGP_129S1SvImJ_P0077774 Vopp1 protein_coding protein_coding MGP_129S1SvImJ_T0077775.1 MGP_129S1SvImJ_G0030804.1 mouse_genomes_project 6 57275911 57350451 - MGP_129S1SvImJ_P0077775 Vopp1 protein_coding protein_coding MGP_129S1SvImJ_T0077776.1 MGP_129S1SvImJ_G0030804.1 mouse_genomes_project 6 57282275 57350625 - MGP_129S1SvImJ_P0077776 Vopp1 protein_coding protein_coding MGP_129S1SvImJ_T0077777.1 MGP_129S1SvImJ_G0030804.1 mouse_genomes_project 6 57286490 57350111 - Vopp1 protein_coding processed_transcript MGP_129S1SvImJ_T0078664.1 MGP_129S1SvImJ_G0030996.1 mouse_genomes_project 6 89091967 89095146 + Efcc1 protein_coding retained_intron MGP_129S1SvImJ_T0078665.1 MGP_129S1SvImJ_G0030996.1 mouse_genomes_project 6 89091967 89116582 + MGP_129S1SvImJ_P0078665 Efcc1 protein_coding protein_coding MGP_129S1SvImJ_T0078666.1 MGP_129S1SvImJ_G0030996.1 mouse_genomes_project 6 89091991 89117823 + MGP_129S1SvImJ_P0078666 Efcc1 protein_coding protein_coding MGP_129S1SvImJ_T0078667.1 MGP_129S1SvImJ_G0030996.1 mouse_genomes_project 6 89093907 89113027 + Efcc1 protein_coding processed_transcript MGP_129S1SvImJ_T0078668.1 MGP_129S1SvImJ_G0030996.1 mouse_genomes_project 6 89114652 89115893 + Efcc1 protein_coding retained_intron MGP_129S1SvImJ_T0077257.1 MGP_129S1SvImJ_G0030668.1 mouse_genomes_project 6 41508023 41509073 + MGP_129S1SvImJ_P0077257 Olfr444 protein_coding protein_coding MGP_129S1SvImJ_T0078796.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90318051 90328016 + MGP_129S1SvImJ_P0078796 Tpra1 protein_coding protein_coding MGP_129S1SvImJ_T0078797.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90318099 90325199 + Tpra1 protein_coding processed_transcript MGP_129S1SvImJ_T0078798.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90318117 90321898 + Tpra1 protein_coding retained_intron MGP_129S1SvImJ_T0078799.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90318117 90322365 + Tpra1 protein_coding processed_transcript MGP_129S1SvImJ_T0078800.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90318133 90328016 + MGP_129S1SvImJ_P0078800 Tpra1 protein_coding protein_coding MGP_129S1SvImJ_T0078801.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90318137 90326148 + Tpra1 protein_coding processed_transcript MGP_129S1SvImJ_T0078802.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90318142 90326012 + MGP_129S1SvImJ_P0078802 Tpra1 protein_coding protein_coding MGP_129S1SvImJ_T0078803.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90318152 90325996 + MGP_129S1SvImJ_P0078803 Tpra1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078804.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90318253 90328016 + MGP_129S1SvImJ_P0078804 Tpra1 protein_coding protein_coding MGP_129S1SvImJ_T0078805.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90321434 90325086 + Tpra1 protein_coding processed_transcript MGP_129S1SvImJ_T0078806.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90321746 90328016 + MGP_129S1SvImJ_P0078806 Tpra1 protein_coding protein_coding MGP_129S1SvImJ_T0078807.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90321755 90323558 + Tpra1 protein_coding processed_transcript MGP_129S1SvImJ_T0078808.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90321757 90327532 + MGP_129S1SvImJ_P0078808 Tpra1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078809.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90321775 90326605 + MGP_129S1SvImJ_P0078809 Tpra1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078810.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90321841 90326433 + MGP_129S1SvImJ_P0078810 Tpra1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078811.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90323772 90327769 + MGP_129S1SvImJ_P0078811 Tpra1 protein_coding protein_coding MGP_129S1SvImJ_T0078812.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90323772 90328023 + MGP_129S1SvImJ_P0078812 Tpra1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078813.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90323786 90326886 + MGP_129S1SvImJ_P0078813 Tpra1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078814.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90323985 90325312 + Tpra1 protein_coding processed_transcript MGP_129S1SvImJ_T0078815.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90323985 90325328 + Tpra1 protein_coding retained_intron MGP_129S1SvImJ_T0078816.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90325942 90326734 + Tpra1 protein_coding retained_intron MGP_129S1SvImJ_T0078817.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90326007 90326283 + Tpra1 protein_coding retained_intron MGP_129S1SvImJ_T0078818.1 MGP_129S1SvImJ_G0031017.1 mouse_genomes_project 6 90326383 90327540 + Tpra1 protein_coding retained_intron MGP_129S1SvImJ_T0005121.1 MGP_129S1SvImJ_G0004371.1 mouse_genomes_project 6 138413028 138416158 - Gm17088 antisense antisense MGP_129S1SvImJ_T0000327.1 MGP_129S1SvImJ_G0000269.1 mouse_genomes_project 6 69373107 69373410 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0015652.1 MGP_129S1SvImJ_G0013741.1 mouse_genomes_project 6 136942596 136942951 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015296.1 MGP_129S1SvImJ_G0013385.1 mouse_genomes_project 6 19745422 19747071 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098621.1 MGP_129S1SvImJ_G0036706.1 mouse_genomes_project 6 90699412 90699547 - Gm25961 rRNA rRNA MGP_129S1SvImJ_T0005015.1 MGP_129S1SvImJ_G0004299.1 mouse_genomes_project 6 84717004 84737931 - Vax2os antisense antisense MGP_129S1SvImJ_T0005016.1 MGP_129S1SvImJ_G0004299.1 mouse_genomes_project 6 84724330 84736662 - Vax2os antisense antisense MGP_129S1SvImJ_T0005017.1 MGP_129S1SvImJ_G0004299.1 mouse_genomes_project 6 84727864 84729278 - Vax2os antisense antisense MGP_129S1SvImJ_T0005018.1 MGP_129S1SvImJ_G0004299.1 mouse_genomes_project 6 84728214 84729357 - Vax2os antisense antisense MGP_129S1SvImJ_T0015473.1 MGP_129S1SvImJ_G0013562.1 mouse_genomes_project 6 79302037 79302533 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001949.1 MGP_129S1SvImJ_G0001862.1 mouse_genomes_project 6 15192139 15197737 + TEC TEC MGP_129S1SvImJ_T0077636.1 MGP_129S1SvImJ_G0030760.1 mouse_genomes_project 6 53781372 53858891 + MGP_129S1SvImJ_P0077636 Wipf3 protein_coding protein_coding MGP_129S1SvImJ_T0077637.1 MGP_129S1SvImJ_G0030760.1 mouse_genomes_project 6 53781372 53858891 + MGP_129S1SvImJ_P0077637 Wipf3 protein_coding protein_coding MGP_129S1SvImJ_T0077638.1 MGP_129S1SvImJ_G0030760.1 mouse_genomes_project 6 53804319 53858894 + MGP_129S1SvImJ_P0077638 Wipf3 protein_coding protein_coding MGP_129S1SvImJ_T0077639.1 MGP_129S1SvImJ_G0030760.1 mouse_genomes_project 6 53804319 53858894 + MGP_129S1SvImJ_P0077639 Wipf3 protein_coding protein_coding MGP_129S1SvImJ_T0077640.1 MGP_129S1SvImJ_G0030760.1 mouse_genomes_project 6 53823417 53839424 + Wipf3 protein_coding processed_transcript MGP_129S1SvImJ_T0077641.1 MGP_129S1SvImJ_G0030760.1 mouse_genomes_project 6 53843033 53846669 + Wipf3 protein_coding retained_intron MGP_129S1SvImJ_T0015287.1 MGP_129S1SvImJ_G0013376.1 mouse_genomes_project 6 15581053 15582014 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010805.1 MGP_129S1SvImJ_G0008921.1 mouse_genomes_project 6 92232629 92232756 - Gm24816 miRNA miRNA MGP_129S1SvImJ_T0080593.1 MGP_129S1SvImJ_G0031411.1 mouse_genomes_project 6 139288445 139293604 + MGP_129S1SvImJ_P0080593 Apold1 protein_coding protein_coding MGP_129S1SvImJ_T0080561.1 MGP_129S1SvImJ_G0031405.1 mouse_genomes_project 6 138877343 138899610 - MGP_129S1SvImJ_P0080561 Mansc1 protein_coding protein_coding MGP_129S1SvImJ_T0011668.1 MGP_129S1SvImJ_G0009784.1 mouse_genomes_project 6 51490366 51490570 + Gm27454 misc_RNA misc_RNA MGP_129S1SvImJ_T0100022.1 MGP_129S1SvImJ_G0038089.1 mouse_genomes_project 6 121595869 121595970 + Gm25905 snRNA snRNA MGP_129S1SvImJ_T0101270.1 MGP_129S1SvImJ_G0039337.1 mouse_genomes_project 6 99391490 99391620 - Gm25852 snoRNA snoRNA MGP_129S1SvImJ_T0015669.1 MGP_129S1SvImJ_G0013758.1 mouse_genomes_project 6 144822772 144823214 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010786.1 MGP_129S1SvImJ_G0008902.1 mouse_genomes_project 6 50435504 50435603 - Mir148a miRNA miRNA MGP_129S1SvImJ_T0015452.1 MGP_129S1SvImJ_G0013541.1 mouse_genomes_project 6 70842982 70844328 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079587.1 MGP_129S1SvImJ_G0031170.1 mouse_genomes_project 6 119190163 119190745 + MGP_129S1SvImJ_P0079587 protein_coding protein_coding MGP_129S1SvImJ_T0015668.1 MGP_129S1SvImJ_G0013757.1 mouse_genomes_project 6 144744024 144744530 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079329.1 MGP_129S1SvImJ_G0031124.1 mouse_genomes_project 6 115961338 115966995 + MGP_129S1SvImJ_P0079329 Jagn1 protein_coding protein_coding MGP_129S1SvImJ_T0079330.1 MGP_129S1SvImJ_G0031124.1 mouse_genomes_project 6 115961364 115963778 + Jagn1 protein_coding retained_intron MGP_129S1SvImJ_T0079331.1 MGP_129S1SvImJ_G0031124.1 mouse_genomes_project 6 115961379 115966975 + MGP_129S1SvImJ_P0079331 Jagn1 protein_coding protein_coding MGP_129S1SvImJ_T0002695.1 MGP_129S1SvImJ_G0002577.1 mouse_genomes_project 6 39521688 39522344 + MGP_129S1SvImJ_P0002695 Trbv2 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0076297.1 MGP_129S1SvImJ_G0030456.1 mouse_genomes_project 6 9340568 9783765 - MGP_129S1SvImJ_P0076297 Thsd7a protein_coding protein_coding MGP_129S1SvImJ_T0076298.1 MGP_129S1SvImJ_G0030456.1 mouse_genomes_project 6 9346824 9783922 - MGP_129S1SvImJ_P0076298 Thsd7a protein_coding protein_coding MGP_129S1SvImJ_T0076299.1 MGP_129S1SvImJ_G0030456.1 mouse_genomes_project 6 9346864 9348067 - Thsd7a protein_coding retained_intron MGP_129S1SvImJ_T0076300.1 MGP_129S1SvImJ_G0030456.1 mouse_genomes_project 6 9347086 9448321 - Thsd7a protein_coding processed_transcript MGP_129S1SvImJ_T0076301.1 MGP_129S1SvImJ_G0030456.1 mouse_genomes_project 6 9352413 9356305 - Thsd7a protein_coding retained_intron MGP_129S1SvImJ_T0076302.1 MGP_129S1SvImJ_G0030456.1 mouse_genomes_project 6 9497995 9584813 - Thsd7a protein_coding processed_transcript MGP_129S1SvImJ_T0079257.1 MGP_129S1SvImJ_G0031114.1 mouse_genomes_project 6 115736741 115785724 + MGP_129S1SvImJ_P0079257 Mtmr14 protein_coding protein_coding MGP_129S1SvImJ_T0079258.1 MGP_129S1SvImJ_G0031114.1 mouse_genomes_project 6 115736749 115775126 + MGP_129S1SvImJ_P0079258 Mtmr14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079259.1 MGP_129S1SvImJ_G0031114.1 mouse_genomes_project 6 115736795 115785719 + MGP_129S1SvImJ_P0079259 Mtmr14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079260.1 MGP_129S1SvImJ_G0031114.1 mouse_genomes_project 6 115738369 115760257 + MGP_129S1SvImJ_P0079260 Mtmr14 protein_coding protein_coding MGP_129S1SvImJ_T0079261.1 MGP_129S1SvImJ_G0031114.1 mouse_genomes_project 6 115757325 115773841 + MGP_129S1SvImJ_P0079261 Mtmr14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079262.1 MGP_129S1SvImJ_G0031114.1 mouse_genomes_project 6 115759058 115770373 + MGP_129S1SvImJ_P0079262 Mtmr14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079263.1 MGP_129S1SvImJ_G0031114.1 mouse_genomes_project 6 115763860 115782267 + MGP_129S1SvImJ_P0079263 Mtmr14 protein_coding protein_coding MGP_129S1SvImJ_T0079264.1 MGP_129S1SvImJ_G0031114.1 mouse_genomes_project 6 115770306 115785251 + MGP_129S1SvImJ_P0079264 Mtmr14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079265.1 MGP_129S1SvImJ_G0031114.1 mouse_genomes_project 6 115770337 115785528 + MGP_129S1SvImJ_P0079265 Mtmr14 protein_coding protein_coding MGP_129S1SvImJ_T0079266.1 MGP_129S1SvImJ_G0031114.1 mouse_genomes_project 6 115773880 115785419 + MGP_129S1SvImJ_P0079266 Mtmr14 protein_coding protein_coding MGP_129S1SvImJ_T0008547.1 MGP_129S1SvImJ_G0006922.1 mouse_genomes_project 6 29008284 29010133 + Gm13833 lincRNA lincRNA MGP_129S1SvImJ_T0011683.1 MGP_129S1SvImJ_G0009799.1 mouse_genomes_project 6 110712294 110712648 + Gm27813 misc_RNA misc_RNA MGP_129S1SvImJ_T0010790.1 MGP_129S1SvImJ_G0008906.1 mouse_genomes_project 6 55623401 55623505 - Gm44413 miRNA miRNA MGP_129S1SvImJ_T0076675.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27594034 27594751 + MGP_129S1SvImJ_P0076675 Ahcyl2 protein_coding protein_coding MGP_129S1SvImJ_T0076676.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27594466 27702798 + Ahcyl2 protein_coding retained_intron MGP_129S1SvImJ_T0076677.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27594515 27750794 + MGP_129S1SvImJ_P0076677 Ahcyl2 protein_coding protein_coding MGP_129S1SvImJ_T0076678.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27594521 27596667 + Ahcyl2 protein_coding retained_intron MGP_129S1SvImJ_T0076679.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27594551 27706031 + MGP_129S1SvImJ_P0076679 Ahcyl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076680.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27594561 27750800 + MGP_129S1SvImJ_P0076680 Ahcyl2 protein_coding protein_coding MGP_129S1SvImJ_T0076681.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27634601 27719105 + MGP_129S1SvImJ_P0076681 Ahcyl2 protein_coding protein_coding MGP_129S1SvImJ_T0076682.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27689147 27747699 + MGP_129S1SvImJ_P0076682 Ahcyl2 protein_coding protein_coding MGP_129S1SvImJ_T0076683.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27689154 27698615 + MGP_129S1SvImJ_P0076683 Ahcyl2 protein_coding protein_coding MGP_129S1SvImJ_T0076684.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27689156 27706043 + MGP_129S1SvImJ_P0076684 Ahcyl2 protein_coding protein_coding MGP_129S1SvImJ_T0076685.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27689161 27716011 + MGP_129S1SvImJ_P0076685 Ahcyl2 protein_coding protein_coding MGP_129S1SvImJ_T0076686.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27689278 27702798 + Ahcyl2 protein_coding retained_intron MGP_129S1SvImJ_T0076687.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27694757 27750788 + MGP_129S1SvImJ_P0076687 Ahcyl2 protein_coding protein_coding MGP_129S1SvImJ_T0076688.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27695063 27719114 + MGP_129S1SvImJ_P0076688 Ahcyl2 protein_coding protein_coding MGP_129S1SvImJ_T0076689.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27695088 27719107 + MGP_129S1SvImJ_P0076689 Ahcyl2 protein_coding protein_coding MGP_129S1SvImJ_T0076690.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27700765 27706633 + Ahcyl2 protein_coding processed_transcript MGP_129S1SvImJ_T0076691.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27705706 27750793 + Ahcyl2 protein_coding retained_intron MGP_129S1SvImJ_T0076692.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27712102 27714501 + Ahcyl2 protein_coding retained_intron MGP_129S1SvImJ_T0076693.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27730184 27732590 + Ahcyl2 protein_coding retained_intron MGP_129S1SvImJ_T0076694.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27735052 27747539 + Ahcyl2 protein_coding retained_intron MGP_129S1SvImJ_T0076695.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27741757 27747691 + Ahcyl2 protein_coding processed_transcript MGP_129S1SvImJ_T0076696.1 MGP_129S1SvImJ_G0030531.1 mouse_genomes_project 6 27742229 27747635 + Ahcyl2 protein_coding processed_transcript MGP_129S1SvImJ_T0078920.1 MGP_129S1SvImJ_G0031047.1 mouse_genomes_project 6 93073513 93088274 + MGP_129S1SvImJ_P0078920 Tmem43 protein_coding protein_coding MGP_129S1SvImJ_T0078921.1 MGP_129S1SvImJ_G0031047.1 mouse_genomes_project 6 93073537 93077444 + Tmem43 protein_coding retained_intron MGP_129S1SvImJ_T0078922.1 MGP_129S1SvImJ_G0031047.1 mouse_genomes_project 6 93073561 93074286 + Tmem43 protein_coding processed_transcript MGP_129S1SvImJ_T0078923.1 MGP_129S1SvImJ_G0031047.1 mouse_genomes_project 6 93073569 93078951 + Tmem43 protein_coding retained_intron MGP_129S1SvImJ_T0078924.1 MGP_129S1SvImJ_G0031047.1 mouse_genomes_project 6 93076410 93078068 + Tmem43 protein_coding processed_transcript MGP_129S1SvImJ_T0008638.1 MGP_129S1SvImJ_G0006985.1 mouse_genomes_project 6 71828396 71849468 + Gm44174 lincRNA lincRNA MGP_129S1SvImJ_T0079576.1 MGP_129S1SvImJ_G0031167.1 mouse_genomes_project 6 119083541 119138318 - MGP_129S1SvImJ_P0079576 Alox5 protein_coding protein_coding MGP_129S1SvImJ_T0079577.1 MGP_129S1SvImJ_G0031167.1 mouse_genomes_project 6 119083738 119138271 - Alox5 protein_coding retained_intron MGP_129S1SvImJ_T0079578.1 MGP_129S1SvImJ_G0031167.1 mouse_genomes_project 6 119083740 119086236 - Alox5 protein_coding retained_intron MGP_129S1SvImJ_T0079579.1 MGP_129S1SvImJ_G0031167.1 mouse_genomes_project 6 119084071 119138164 - MGP_129S1SvImJ_P0079579 Alox5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079580.1 MGP_129S1SvImJ_G0031167.1 mouse_genomes_project 6 119084183 119138164 - MGP_129S1SvImJ_P0079580 Alox5 protein_coding protein_coding MGP_129S1SvImJ_T0079581.1 MGP_129S1SvImJ_G0031167.1 mouse_genomes_project 6 119084183 119138164 - MGP_129S1SvImJ_P0079581 Alox5 protein_coding protein_coding MGP_129S1SvImJ_T0079582.1 MGP_129S1SvImJ_G0031167.1 mouse_genomes_project 6 119086034 119087464 - Alox5 protein_coding retained_intron MGP_129S1SvImJ_T0079583.1 MGP_129S1SvImJ_G0031167.1 mouse_genomes_project 6 119088913 119099646 - Alox5 protein_coding processed_transcript MGP_129S1SvImJ_T0002020.1 MGP_129S1SvImJ_G0001933.1 mouse_genomes_project 6 60527641 60531669 - TEC TEC MGP_129S1SvImJ_T0080730.1 MGP_129S1SvImJ_G0031439.1 mouse_genomes_project 6 142567129 142645838 - Slc15a5 protein_coding retained_intron MGP_129S1SvImJ_T0080731.1 MGP_129S1SvImJ_G0031439.1 mouse_genomes_project 6 142567129 142650755 - MGP_129S1SvImJ_P0080731 Slc15a5 protein_coding protein_coding MGP_129S1SvImJ_T0080732.1 MGP_129S1SvImJ_G0031439.1 mouse_genomes_project 6 142567872 142650536 - MGP_129S1SvImJ_P0080732 Slc15a5 protein_coding protein_coding MGP_129S1SvImJ_T0080733.1 MGP_129S1SvImJ_G0031439.1 mouse_genomes_project 6 142602818 142614247 - MGP_129S1SvImJ_P0080733 Slc15a5 protein_coding protein_coding MGP_129S1SvImJ_T0080734.1 MGP_129S1SvImJ_G0031439.1 mouse_genomes_project 6 142610642 142621008 - MGP_129S1SvImJ_P0080734 Slc15a5 protein_coding protein_coding MGP_129S1SvImJ_T0080735.1 MGP_129S1SvImJ_G0031439.1 mouse_genomes_project 6 142614420 142634385 - Slc15a5 protein_coding retained_intron MGP_129S1SvImJ_T0015292.1 MGP_129S1SvImJ_G0013381.1 mouse_genomes_project 6 17164386 17164493 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015254.1 MGP_129S1SvImJ_G0013343.1 mouse_genomes_project 6 1614667 1614839 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015616.1 MGP_129S1SvImJ_G0013705.1 mouse_genomes_project 6 130471044 130471322 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002595.1 MGP_129S1SvImJ_G0002496.1 mouse_genomes_project 6 40052221 40052270 + MGP_129S1SvImJ_P0002595 Trbj2-4 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0015548.1 MGP_129S1SvImJ_G0013637.1 mouse_genomes_project 6 110161423 110161912 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015518.1 MGP_129S1SvImJ_G0013607.1 mouse_genomes_project 6 96601324 96603098 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011670.1 MGP_129S1SvImJ_G0009786.1 mouse_genomes_project 6 51506327 51506386 + Gm27280 misc_RNA misc_RNA MGP_129S1SvImJ_T0000299.1 MGP_129S1SvImJ_G0000241.1 mouse_genomes_project 6 67863254 67863507 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0002188.1 MGP_129S1SvImJ_G0002100.1 mouse_genomes_project 6 141667329 141668383 - TEC TEC MGP_129S1SvImJ_T0078168.1 MGP_129S1SvImJ_G0030899.1 mouse_genomes_project 6 80675552 80676001 + MGP_129S1SvImJ_P0078168 Gm20594 protein_coding protein_coding MGP_129S1SvImJ_T0102601.1 MGP_129S1SvImJ_G0040434.1 mouse_genomes_project 6 40967208 40967350 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0078731.1 MGP_129S1SvImJ_G0031008.1 mouse_genomes_project 6 89609023 89610013 + MGP_129S1SvImJ_P0078731 Dnajb8 protein_coding protein_coding MGP_129S1SvImJ_T0078732.1 MGP_129S1SvImJ_G0031008.1 mouse_genomes_project 6 89609640 89640835 + MGP_129S1SvImJ_P0078732 Dnajb8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0000193.1 MGP_129S1SvImJ_G0000148.1 mouse_genomes_project 6 69849355 69849860 - MGP_129S1SvImJ_P0000193 Igkv4-68 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0015346.1 MGP_129S1SvImJ_G0013435.1 mouse_genomes_project 6 46483862 46484052 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008517.1 MGP_129S1SvImJ_G0006901.1 mouse_genomes_project 6 7945262 7954350 - AA545190 lincRNA lincRNA MGP_129S1SvImJ_T0008518.1 MGP_129S1SvImJ_G0006901.1 mouse_genomes_project 6 7945701 7954325 - AA545190 lincRNA lincRNA MGP_129S1SvImJ_T0008519.1 MGP_129S1SvImJ_G0006901.1 mouse_genomes_project 6 7945760 7948081 - AA545190 lincRNA lincRNA MGP_129S1SvImJ_T0078500.1 MGP_129S1SvImJ_G0030967.1 mouse_genomes_project 6 87154820 87158194 + Tprkb protein_coding processed_transcript MGP_129S1SvImJ_T0078501.1 MGP_129S1SvImJ_G0030967.1 mouse_genomes_project 6 87154832 87173206 + MGP_129S1SvImJ_P0078501 Tprkb protein_coding protein_coding MGP_129S1SvImJ_T0078502.1 MGP_129S1SvImJ_G0030967.1 mouse_genomes_project 6 87154846 87158580 + Tprkb protein_coding processed_transcript MGP_129S1SvImJ_T0078503.1 MGP_129S1SvImJ_G0030967.1 mouse_genomes_project 6 87154862 87168650 + Tprkb protein_coding processed_transcript MGP_129S1SvImJ_T0078504.1 MGP_129S1SvImJ_G0030967.1 mouse_genomes_project 6 87157050 87159014 + Tprkb protein_coding retained_intron MGP_129S1SvImJ_T0078505.1 MGP_129S1SvImJ_G0030967.1 mouse_genomes_project 6 87158687 87171881 + MGP_129S1SvImJ_P0078505 Tprkb protein_coding protein_coding MGP_129S1SvImJ_T0078506.1 MGP_129S1SvImJ_G0030967.1 mouse_genomes_project 6 87158706 87174557 + MGP_129S1SvImJ_P0078506 Tprkb protein_coding protein_coding MGP_129S1SvImJ_T0078507.1 MGP_129S1SvImJ_G0030967.1 mouse_genomes_project 6 87158706 87172368 + MGP_129S1SvImJ_P0078507 Tprkb protein_coding protein_coding MGP_129S1SvImJ_T0078508.1 MGP_129S1SvImJ_G0030967.1 mouse_genomes_project 6 87158715 87174555 + MGP_129S1SvImJ_P0078508 Tprkb protein_coding protein_coding MGP_129S1SvImJ_T0078509.1 MGP_129S1SvImJ_G0030967.1 mouse_genomes_project 6 87158715 87172793 + MGP_129S1SvImJ_P0078509 Tprkb protein_coding protein_coding MGP_129S1SvImJ_T0078510.1 MGP_129S1SvImJ_G0030967.1 mouse_genomes_project 6 87158723 87173298 + MGP_129S1SvImJ_P0078510 Tprkb protein_coding protein_coding MGP_129S1SvImJ_T0078511.1 MGP_129S1SvImJ_G0030967.1 mouse_genomes_project 6 87158724 87168889 + Tprkb protein_coding processed_transcript MGP_129S1SvImJ_T0078512.1 MGP_129S1SvImJ_G0030967.1 mouse_genomes_project 6 87158725 87172164 + MGP_129S1SvImJ_P0078512 Tprkb protein_coding protein_coding MGP_129S1SvImJ_T0078513.1 MGP_129S1SvImJ_G0030967.1 mouse_genomes_project 6 87158766 87172213 + MGP_129S1SvImJ_P0078513 Tprkb protein_coding protein_coding MGP_129S1SvImJ_T0101750.1 MGP_129S1SvImJ_G0039739.1 mouse_genomes_project 6 84612249 84613021 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0010812.1 MGP_129S1SvImJ_G0008928.1 mouse_genomes_project 6 109690768 109690894 - Gm27690 miRNA miRNA MGP_129S1SvImJ_T0002077.1 MGP_129S1SvImJ_G0001990.1 mouse_genomes_project 6 88485766 88487888 - TEC TEC MGP_129S1SvImJ_T0098993.1 MGP_129S1SvImJ_G0037067.1 mouse_genomes_project 6 133089423 133090017 + Gm43914 sense_intronic sense_intronic MGP_129S1SvImJ_T0080063.1 MGP_129S1SvImJ_G0031268.1 mouse_genomes_project 6 128115447 128117406 + MGP_129S1SvImJ_P0080063 Spsb2 protein_coding protein_coding MGP_129S1SvImJ_T0080064.1 MGP_129S1SvImJ_G0031268.1 mouse_genomes_project 6 128115671 128117123 + MGP_129S1SvImJ_P0080064 Spsb2 protein_coding protein_coding MGP_129S1SvImJ_T0080065.1 MGP_129S1SvImJ_G0031268.1 mouse_genomes_project 6 128115692 128117406 + MGP_129S1SvImJ_P0080065 Spsb2 protein_coding protein_coding MGP_129S1SvImJ_T0080066.1 MGP_129S1SvImJ_G0031268.1 mouse_genomes_project 6 128115705 128116725 + MGP_129S1SvImJ_P0080066 Spsb2 protein_coding protein_coding MGP_129S1SvImJ_T0080067.1 MGP_129S1SvImJ_G0031268.1 mouse_genomes_project 6 128116084 128117406 + MGP_129S1SvImJ_P0080067 Spsb2 protein_coding protein_coding MGP_129S1SvImJ_T0015638.1 MGP_129S1SvImJ_G0013727.1 mouse_genomes_project 6 134353875 134353996 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005067.1 MGP_129S1SvImJ_G0004329.1 mouse_genomes_project 6 103275785 103288687 + Gm26911 antisense antisense MGP_129S1SvImJ_T0005068.1 MGP_129S1SvImJ_G0004329.1 mouse_genomes_project 6 103275802 103298554 + Gm26911 antisense antisense MGP_129S1SvImJ_T0005069.1 MGP_129S1SvImJ_G0004329.1 mouse_genomes_project 6 103275874 103287303 + Gm26911 antisense antisense MGP_129S1SvImJ_T0079451.1 MGP_129S1SvImJ_G0031145.1 mouse_genomes_project 6 117739968 117887273 + Syn2 protein_coding retained_intron MGP_129S1SvImJ_T0079452.1 MGP_129S1SvImJ_G0031145.1 mouse_genomes_project 6 117739968 117888741 + MGP_129S1SvImJ_P0079452 Syn2 protein_coding protein_coding MGP_129S1SvImJ_T0079453.1 MGP_129S1SvImJ_G0031145.1 mouse_genomes_project 6 117739983 117894188 + MGP_129S1SvImJ_P0079453 Syn2 protein_coding protein_coding MGP_129S1SvImJ_T0079454.1 MGP_129S1SvImJ_G0031145.1 mouse_genomes_project 6 117740016 117888741 + MGP_129S1SvImJ_P0079454 Syn2 protein_coding protein_coding MGP_129S1SvImJ_T0079455.1 MGP_129S1SvImJ_G0031145.1 mouse_genomes_project 6 117824832 117854760 + Syn2 protein_coding processed_transcript MGP_129S1SvImJ_T0079457.1 MGP_129S1SvImJ_G0031145.1 mouse_genomes_project 6 117849637 117888741 + Syn2 protein_coding processed_transcript MGP_129S1SvImJ_T0079460.1 MGP_129S1SvImJ_G0031145.1 mouse_genomes_project 6 117865172 117890891 + Syn2 protein_coding retained_intron MGP_129S1SvImJ_T0015673.1 MGP_129S1SvImJ_G0013762.1 mouse_genomes_project 6 145891717 145892247 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002111.1 MGP_129S1SvImJ_G0002024.1 mouse_genomes_project 6 94761713 94763176 + TEC TEC MGP_129S1SvImJ_T0080413.1 MGP_129S1SvImJ_G0031339.1 mouse_genomes_project 6 132699277 132712019 + MGP_129S1SvImJ_P0080413 Klrb1f protein_coding protein_coding MGP_129S1SvImJ_T0080414.1 MGP_129S1SvImJ_G0031339.1 mouse_genomes_project 6 132699277 132712019 + MGP_129S1SvImJ_P0080414 Klrb1f protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080415.1 MGP_129S1SvImJ_G0031339.1 mouse_genomes_project 6 132699296 132711265 + MGP_129S1SvImJ_P0080415 Klrb1f protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080416.1 MGP_129S1SvImJ_G0031339.1 mouse_genomes_project 6 132699301 132707122 + Klrb1f protein_coding retained_intron MGP_129S1SvImJ_T0080417.1 MGP_129S1SvImJ_G0031339.1 mouse_genomes_project 6 132699303 132708195 + MGP_129S1SvImJ_P0080417 Klrb1f protein_coding protein_coding MGP_129S1SvImJ_T0080418.1 MGP_129S1SvImJ_G0031339.1 mouse_genomes_project 6 132702685 132708201 + Klrb1f protein_coding processed_transcript MGP_129S1SvImJ_T0081117.1 MGP_129S1SvImJ_G0031507.1 mouse_genomes_project 6 154100429 154216702 - MGP_129S1SvImJ_P0081117 Dennd5b protein_coding protein_coding MGP_129S1SvImJ_T0081118.1 MGP_129S1SvImJ_G0031507.1 mouse_genomes_project 6 154127639 154130979 - Dennd5b protein_coding retained_intron MGP_129S1SvImJ_T0081119.1 MGP_129S1SvImJ_G0031507.1 mouse_genomes_project 6 154127777 154216560 - Dennd5b protein_coding retained_intron MGP_129S1SvImJ_T0081120.1 MGP_129S1SvImJ_G0031507.1 mouse_genomes_project 6 154151709 154156476 - Dennd5b protein_coding retained_intron MGP_129S1SvImJ_T0081121.1 MGP_129S1SvImJ_G0031507.1 mouse_genomes_project 6 154182578 154195509 - MGP_129S1SvImJ_P0081121 Dennd5b protein_coding protein_coding MGP_129S1SvImJ_T0081122.1 MGP_129S1SvImJ_G0031507.1 mouse_genomes_project 6 154182601 154216606 - MGP_129S1SvImJ_P0081122 Dennd5b protein_coding protein_coding MGP_129S1SvImJ_T0081123.1 MGP_129S1SvImJ_G0031507.1 mouse_genomes_project 6 154196618 154199597 - Dennd5b protein_coding retained_intron MGP_129S1SvImJ_T0002711.1 MGP_129S1SvImJ_G0002592.1 mouse_genomes_project 6 39685602 39686095 + MGP_129S1SvImJ_P0002711 Trbv21 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002712.1 MGP_129S1SvImJ_G0002592.1 mouse_genomes_project 6 39685807 39686097 + MGP_129S1SvImJ_P0002712 Trbv21 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0015645.1 MGP_129S1SvImJ_G0013734.1 mouse_genomes_project 6 135830440 135830650 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005056.1 MGP_129S1SvImJ_G0004323.1 mouse_genomes_project 6 93638817 93642541 - 4930466I24Rik antisense antisense MGP_129S1SvImJ_T0077365.1 MGP_129S1SvImJ_G0030695.1 mouse_genomes_project 6 47483515 47487725 + MGP_129S1SvImJ_P0077365 Atp6v0e2 protein_coding protein_coding MGP_129S1SvImJ_T0077366.1 MGP_129S1SvImJ_G0030695.1 mouse_genomes_project 6 47483538 47485787 + Atp6v0e2 protein_coding retained_intron MGP_129S1SvImJ_T0077367.1 MGP_129S1SvImJ_G0030695.1 mouse_genomes_project 6 47483565 47487725 + MGP_129S1SvImJ_P0077367 Atp6v0e2 protein_coding protein_coding MGP_129S1SvImJ_T0011689.1 MGP_129S1SvImJ_G0009805.1 mouse_genomes_project 6 125728091 125728203 + Gm26168 misc_RNA misc_RNA MGP_129S1SvImJ_T0004977.1 MGP_129S1SvImJ_G0004272.1 mouse_genomes_project 6 51420559 51428694 + Gm29430 antisense antisense MGP_129S1SvImJ_T0004978.1 MGP_129S1SvImJ_G0004272.1 mouse_genomes_project 6 51422526 51428621 + Gm29430 antisense antisense MGP_129S1SvImJ_T0077149.1 MGP_129S1SvImJ_G0030627.1 mouse_genomes_project 6 39947476 39951534 - MGP_129S1SvImJ_P0077149 protein_coding protein_coding MGP_129S1SvImJ_T0078733.1 MGP_129S1SvImJ_G0031009.1 mouse_genomes_project 6 89643753 89844271 - MGP_129S1SvImJ_P0078733 Eefsec protein_coding protein_coding MGP_129S1SvImJ_T0078734.1 MGP_129S1SvImJ_G0031009.1 mouse_genomes_project 6 89644292 89844259 - MGP_129S1SvImJ_P0078734 Eefsec protein_coding protein_coding MGP_129S1SvImJ_T0078735.1 MGP_129S1SvImJ_G0031009.1 mouse_genomes_project 6 89644692 89844246 - MGP_129S1SvImJ_P0078735 Eefsec protein_coding protein_coding MGP_129S1SvImJ_T0078736.1 MGP_129S1SvImJ_G0031009.1 mouse_genomes_project 6 89668052 89844234 - MGP_129S1SvImJ_P0078736 Eefsec protein_coding protein_coding MGP_129S1SvImJ_T0078737.1 MGP_129S1SvImJ_G0031009.1 mouse_genomes_project 6 89683192 89837101 - MGP_129S1SvImJ_P0078737 Eefsec protein_coding protein_coding MGP_129S1SvImJ_T0078738.1 MGP_129S1SvImJ_G0031009.1 mouse_genomes_project 6 89683375 89844216 - MGP_129S1SvImJ_P0078738 Eefsec protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078706.1 MGP_129S1SvImJ_G0031003.1 mouse_genomes_project 6 89287260 89312452 + MGP_129S1SvImJ_P0078706 Hmces protein_coding protein_coding MGP_129S1SvImJ_T0078707.1 MGP_129S1SvImJ_G0031003.1 mouse_genomes_project 6 89287275 89308871 + Hmces protein_coding processed_transcript MGP_129S1SvImJ_T0078708.1 MGP_129S1SvImJ_G0031003.1 mouse_genomes_project 6 89287283 89288329 + Hmces protein_coding processed_transcript MGP_129S1SvImJ_T0078709.1 MGP_129S1SvImJ_G0031003.1 mouse_genomes_project 6 89287304 89294877 + MGP_129S1SvImJ_P0078709 Hmces protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078710.1 MGP_129S1SvImJ_G0031003.1 mouse_genomes_project 6 89287631 89312452 + MGP_129S1SvImJ_P0078710 Hmces protein_coding protein_coding MGP_129S1SvImJ_T0078711.1 MGP_129S1SvImJ_G0031003.1 mouse_genomes_project 6 89291249 89309248 + Hmces protein_coding processed_transcript MGP_129S1SvImJ_T0078712.1 MGP_129S1SvImJ_G0031003.1 mouse_genomes_project 6 89308815 89312352 + Hmces protein_coding retained_intron MGP_129S1SvImJ_T0015479.1 MGP_129S1SvImJ_G0013568.1 mouse_genomes_project 6 83879282 83880476 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015423.1 MGP_129S1SvImJ_G0013512.1 mouse_genomes_project 6 66670874 66671435 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078484.1 MGP_129S1SvImJ_G0030957.1 mouse_genomes_project 6 86682200 86684669 - MGP_129S1SvImJ_P0078484 Egr4 protein_coding protein_coding MGP_129S1SvImJ_T0015516.1 MGP_129S1SvImJ_G0013605.1 mouse_genomes_project 6 96174913 96175329 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008524.1 MGP_129S1SvImJ_G0006905.1 mouse_genomes_project 6 13727605 13757094 + Gm43998 lincRNA lincRNA MGP_129S1SvImJ_T0102604.1 MGP_129S1SvImJ_G0040437.1 mouse_genomes_project 6 41478161 41478475 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002092.1 MGP_129S1SvImJ_G0002005.1 mouse_genomes_project 6 90140039 90143210 + TEC TEC MGP_129S1SvImJ_T0080307.1 MGP_129S1SvImJ_G0031314.1 mouse_genomes_project 6 130962133 130993781 + MGP_129S1SvImJ_P0080307 Parp11 protein_coding protein_coding MGP_129S1SvImJ_T0080308.1 MGP_129S1SvImJ_G0031314.1 mouse_genomes_project 6 130966489 130987677 + Parp11 protein_coding retained_intron MGP_129S1SvImJ_T0080309.1 MGP_129S1SvImJ_G0031314.1 mouse_genomes_project 6 130966517 130993732 + MGP_129S1SvImJ_P0080309 Parp11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080310.1 MGP_129S1SvImJ_G0031314.1 mouse_genomes_project 6 130966535 130986575 + Parp11 protein_coding retained_intron MGP_129S1SvImJ_T0080311.1 MGP_129S1SvImJ_G0031314.1 mouse_genomes_project 6 130966537 131016988 + MGP_129S1SvImJ_P0080311 Parp11 protein_coding protein_coding MGP_129S1SvImJ_T0080312.1 MGP_129S1SvImJ_G0031314.1 mouse_genomes_project 6 130966544 130994703 + MGP_129S1SvImJ_P0080312 Parp11 protein_coding protein_coding MGP_129S1SvImJ_T0080313.1 MGP_129S1SvImJ_G0031314.1 mouse_genomes_project 6 130987175 130988934 + Parp11 protein_coding retained_intron MGP_129S1SvImJ_T0080314.1 MGP_129S1SvImJ_G0031314.1 mouse_genomes_project 6 130989793 130994594 + Parp11 protein_coding retained_intron MGP_129S1SvImJ_T0080315.1 MGP_129S1SvImJ_G0031314.1 mouse_genomes_project 6 130993302 131012789 + Parp11 protein_coding retained_intron MGP_129S1SvImJ_T0077704.1 MGP_129S1SvImJ_G0030777.1 mouse_genomes_project 6 55462344 55479077 + MGP_129S1SvImJ_P0077704 Ppp1r17 protein_coding protein_coding MGP_129S1SvImJ_T0100013.1 MGP_129S1SvImJ_G0038080.1 mouse_genomes_project 6 98381666 98381770 - Gm26011 snRNA snRNA MGP_129S1SvImJ_T0001946.1 MGP_129S1SvImJ_G0001859.1 mouse_genomes_project 6 13006009 13007696 + TEC TEC MGP_129S1SvImJ_T0015510.1 MGP_129S1SvImJ_G0013599.1 mouse_genomes_project 6 93920839 93921315 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000163.1 MGP_129S1SvImJ_G0000125.1 mouse_genomes_project 6 68639556 68640054 + MGP_129S1SvImJ_P0000163 Igkv16-104 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0101743.1 MGP_129S1SvImJ_G0039736.1 mouse_genomes_project 6 40618205 40619054 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101744.1 MGP_129S1SvImJ_G0039736.1 mouse_genomes_project 6 40618613 40618973 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0004995.1 MGP_129S1SvImJ_G0004287.1 mouse_genomes_project 6 72638504 72641232 - 4933431G14Rik antisense antisense MGP_129S1SvImJ_T0004996.1 MGP_129S1SvImJ_G0004287.1 mouse_genomes_project 6 72638504 72641489 - 4933431G14Rik antisense antisense MGP_129S1SvImJ_T0079795.1 MGP_129S1SvImJ_G0031205.1 mouse_genomes_project 6 123381667 123386536 - MGP_129S1SvImJ_P0079795 Cecr6 protein_coding protein_coding MGP_129S1SvImJ_T0002715.1 MGP_129S1SvImJ_G0002594.1 mouse_genomes_project 6 39710256 39710745 + MGP_129S1SvImJ_P0002715 Trbv26 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002716.1 MGP_129S1SvImJ_G0002594.1 mouse_genomes_project 6 39710276 39710745 + MGP_129S1SvImJ_P0002716 Trbv26 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0015519.1 MGP_129S1SvImJ_G0013608.1 mouse_genomes_project 6 96633400 96633836 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101233.1 MGP_129S1SvImJ_G0039300.1 mouse_genomes_project 6 22785729 22785852 - Gm22529 snoRNA snoRNA MGP_129S1SvImJ_T0077853.1 MGP_129S1SvImJ_G0030829.1 mouse_genomes_project 6 64968263 64982225 + MGP_129S1SvImJ_P0077853 Smarcad1 protein_coding protein_coding MGP_129S1SvImJ_T0077854.1 MGP_129S1SvImJ_G0030829.1 mouse_genomes_project 6 64968289 65041989 + MGP_129S1SvImJ_P0077854 Smarcad1 protein_coding protein_coding MGP_129S1SvImJ_T0077855.1 MGP_129S1SvImJ_G0030829.1 mouse_genomes_project 6 64968301 64969242 + Smarcad1 protein_coding retained_intron MGP_129S1SvImJ_T0077856.1 MGP_129S1SvImJ_G0030829.1 mouse_genomes_project 6 64968347 64969812 + MGP_129S1SvImJ_P0077856 Smarcad1 protein_coding protein_coding MGP_129S1SvImJ_T0077857.1 MGP_129S1SvImJ_G0030829.1 mouse_genomes_project 6 64968516 64969884 + MGP_129S1SvImJ_P0077857 Smarcad1 protein_coding protein_coding MGP_129S1SvImJ_T0077858.1 MGP_129S1SvImJ_G0030829.1 mouse_genomes_project 6 64968538 64978458 + MGP_129S1SvImJ_P0077858 Smarcad1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077859.1 MGP_129S1SvImJ_G0030829.1 mouse_genomes_project 6 64968546 64978547 + MGP_129S1SvImJ_P0077859 Smarcad1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077860.1 MGP_129S1SvImJ_G0030829.1 mouse_genomes_project 6 64968559 65011379 + Smarcad1 protein_coding processed_transcript MGP_129S1SvImJ_T0077861.1 MGP_129S1SvImJ_G0030829.1 mouse_genomes_project 6 64968893 65041526 + MGP_129S1SvImJ_P0077861 Smarcad1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077862.1 MGP_129S1SvImJ_G0030829.1 mouse_genomes_project 6 64978580 64994272 + Smarcad1 protein_coding retained_intron MGP_129S1SvImJ_T0077863.1 MGP_129S1SvImJ_G0030829.1 mouse_genomes_project 6 64984447 65003242 + Smarcad1 protein_coding processed_transcript MGP_129S1SvImJ_T0077864.1 MGP_129S1SvImJ_G0030829.1 mouse_genomes_project 6 65003407 65024078 + MGP_129S1SvImJ_P0077864 Smarcad1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077865.1 MGP_129S1SvImJ_G0030829.1 mouse_genomes_project 6 65007193 65010255 + Smarcad1 protein_coding retained_intron MGP_129S1SvImJ_T0077866.1 MGP_129S1SvImJ_G0030829.1 mouse_genomes_project 6 65026230 65026873 + Smarcad1 protein_coding retained_intron MGP_129S1SvImJ_T0077867.1 MGP_129S1SvImJ_G0030829.1 mouse_genomes_project 6 65033380 65035906 + Smarcad1 protein_coding retained_intron MGP_129S1SvImJ_T0098618.1 MGP_129S1SvImJ_G0036703.1 mouse_genomes_project 6 28256525 28256639 + n-R5s161 rRNA rRNA MGP_129S1SvImJ_T0077399.1 MGP_129S1SvImJ_G0030705.1 mouse_genomes_project 6 47630283 47632802 + MGP_129S1SvImJ_P0077399 Gimap9 protein_coding protein_coding MGP_129S1SvImJ_T0077400.1 MGP_129S1SvImJ_G0030705.1 mouse_genomes_project 6 47631613 47633217 + MGP_129S1SvImJ_P0077400 Gimap9 protein_coding protein_coding MGP_129S1SvImJ_T0015439.1 MGP_129S1SvImJ_G0013528.1 mouse_genomes_project 6 68294999 68295676 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018336.1 MGP_129S1SvImJ_G0015645.1 mouse_genomes_project 6 118999914 119002142 - Gm44957 processed_transcript retained_intron MGP_129S1SvImJ_T0018337.1 MGP_129S1SvImJ_G0015645.1 mouse_genomes_project 6 118999929 119002629 - Gm44957 processed_transcript bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0101291.1 MGP_129S1SvImJ_G0039358.1 mouse_genomes_project 6 135317054 135317188 - Gm22362 snoRNA snoRNA MGP_129S1SvImJ_T0078192.1 MGP_129S1SvImJ_G0030904.1 mouse_genomes_project 6 83345482 83348513 + Tacr1 protein_coding retained_intron MGP_129S1SvImJ_T0078193.1 MGP_129S1SvImJ_G0030904.1 mouse_genomes_project 6 83345623 83512409 + MGP_129S1SvImJ_P0078193 Tacr1 protein_coding protein_coding MGP_129S1SvImJ_T0078194.1 MGP_129S1SvImJ_G0030904.1 mouse_genomes_project 6 83345935 83512414 + MGP_129S1SvImJ_P0078194 Tacr1 protein_coding protein_coding MGP_129S1SvImJ_T0011686.1 MGP_129S1SvImJ_G0009802.1 mouse_genomes_project 6 114428343 114428658 + Gm25454 misc_RNA misc_RNA MGP_129S1SvImJ_T0078371.1 MGP_129S1SvImJ_G0030940.1 mouse_genomes_project 6 84803156 84811766 - MGP_129S1SvImJ_P0078371 Tex261 protein_coding protein_coding MGP_129S1SvImJ_T0078372.1 MGP_129S1SvImJ_G0030940.1 mouse_genomes_project 6 84804684 84811743 - Tex261 protein_coding retained_intron MGP_129S1SvImJ_T0078373.1 MGP_129S1SvImJ_G0030940.1 mouse_genomes_project 6 84805455 84806744 - Tex261 protein_coding retained_intron MGP_129S1SvImJ_T0078374.1 MGP_129S1SvImJ_G0030940.1 mouse_genomes_project 6 84807875 84811711 - Tex261 protein_coding retained_intron MGP_129S1SvImJ_T0100027.1 MGP_129S1SvImJ_G0038094.1 mouse_genomes_project 6 128282957 128283060 + Gm23851 snRNA snRNA MGP_129S1SvImJ_T0000145.1 MGP_129S1SvImJ_G0000112.1 mouse_genomes_project 6 67900940 67901406 + MGP_129S1SvImJ_P0000145 Igkv14-130 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000146.1 MGP_129S1SvImJ_G0000112.1 mouse_genomes_project 6 67900940 67901406 + MGP_129S1SvImJ_P0000146 Igkv14-130 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0098628.1 MGP_129S1SvImJ_G0036713.1 mouse_genomes_project 6 145026488 145026592 + n-R5s168 rRNA rRNA MGP_129S1SvImJ_T0098986.1 MGP_129S1SvImJ_G0037060.1 mouse_genomes_project 6 89743067 89743532 - Gm44265 sense_intronic sense_intronic MGP_129S1SvImJ_T0008527.1 MGP_129S1SvImJ_G0006908.1 mouse_genomes_project 6 14435242 14443560 + D830026I12Rik lincRNA lincRNA MGP_129S1SvImJ_T0008528.1 MGP_129S1SvImJ_G0006908.1 mouse_genomes_project 6 14435607 14444466 + D830026I12Rik lincRNA lincRNA MGP_129S1SvImJ_T0008529.1 MGP_129S1SvImJ_G0006908.1 mouse_genomes_project 6 14435622 14450254 + D830026I12Rik lincRNA lincRNA MGP_129S1SvImJ_T0077734.1 MGP_129S1SvImJ_G0030783.1 mouse_genomes_project 6 56346869 56366700 - MGP_129S1SvImJ_P0077734 Nt5c3 protein_coding protein_coding MGP_129S1SvImJ_T0077735.1 MGP_129S1SvImJ_G0030783.1 mouse_genomes_project 6 56346869 56388546 - MGP_129S1SvImJ_P0077735 Nt5c3 protein_coding protein_coding MGP_129S1SvImJ_T0077736.1 MGP_129S1SvImJ_G0030783.1 mouse_genomes_project 6 56347420 56388433 - MGP_129S1SvImJ_P0077736 Nt5c3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077737.1 MGP_129S1SvImJ_G0030783.1 mouse_genomes_project 6 56347453 56388490 - MGP_129S1SvImJ_P0077737 Nt5c3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077738.1 MGP_129S1SvImJ_G0030783.1 mouse_genomes_project 6 56349263 56388338 - MGP_129S1SvImJ_P0077738 Nt5c3 protein_coding protein_coding MGP_129S1SvImJ_T0077739.1 MGP_129S1SvImJ_G0030783.1 mouse_genomes_project 6 56351129 56354337 - Nt5c3 protein_coding retained_intron MGP_129S1SvImJ_T0077740.1 MGP_129S1SvImJ_G0030783.1 mouse_genomes_project 6 56355986 56388504 - Nt5c3 protein_coding processed_transcript MGP_129S1SvImJ_T0077741.1 MGP_129S1SvImJ_G0030783.1 mouse_genomes_project 6 56357247 56388471 - Nt5c3 protein_coding processed_transcript MGP_129S1SvImJ_T0077742.1 MGP_129S1SvImJ_G0030783.1 mouse_genomes_project 6 56360292 56366697 - Nt5c3 protein_coding retained_intron MGP_129S1SvImJ_T0077094.1 MGP_129S1SvImJ_G0030604.1 mouse_genomes_project 6 38306486 38704370 + MGP_129S1SvImJ_P0077094 Tmem178b protein_coding protein_coding MGP_129S1SvImJ_T0077095.1 MGP_129S1SvImJ_G0030604.1 mouse_genomes_project 6 38555222 38697732 + MGP_129S1SvImJ_P0077095 Tmem178b protein_coding protein_coding MGP_129S1SvImJ_T0077096.1 MGP_129S1SvImJ_G0030604.1 mouse_genomes_project 6 38698195 38704445 + Tmem178b protein_coding retained_intron MGP_129S1SvImJ_T0078638.1 MGP_129S1SvImJ_G0030987.1 mouse_genomes_project 6 88442457 88451769 + MGP_129S1SvImJ_P0078638 D6Ertd527e protein_coding protein_coding MGP_129S1SvImJ_T0078639.1 MGP_129S1SvImJ_G0030987.1 mouse_genomes_project 6 88442459 88451825 + MGP_129S1SvImJ_P0078639 D6Ertd527e protein_coding protein_coding MGP_129S1SvImJ_T0078640.1 MGP_129S1SvImJ_G0030987.1 mouse_genomes_project 6 88442459 88451826 + MGP_129S1SvImJ_P0078640 D6Ertd527e protein_coding protein_coding MGP_129S1SvImJ_T0078641.1 MGP_129S1SvImJ_G0030987.1 mouse_genomes_project 6 88442493 88450236 + D6Ertd527e protein_coding processed_transcript MGP_129S1SvImJ_T0078642.1 MGP_129S1SvImJ_G0030987.1 mouse_genomes_project 6 88442524 88450228 + D6Ertd527e protein_coding processed_transcript MGP_129S1SvImJ_T0102659.1 MGP_129S1SvImJ_G0040492.1 mouse_genomes_project 6 137254477 137255879 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0008781.1 MGP_129S1SvImJ_G0007092.1 mouse_genomes_project 6 148409288 148410832 - 4930579D09Rik lincRNA lincRNA MGP_129S1SvImJ_T0008733.1 MGP_129S1SvImJ_G0007059.1 mouse_genomes_project 6 124195266 124213649 - Gm44148 lincRNA lincRNA MGP_129S1SvImJ_T0101282.1 MGP_129S1SvImJ_G0039349.1 mouse_genomes_project 6 127030671 127030788 - Gm23079 snoRNA snoRNA MGP_129S1SvImJ_T0004975.1 MGP_129S1SvImJ_G0004271.1 mouse_genomes_project 6 51410641 51432790 + Hoxaas3 antisense antisense MGP_129S1SvImJ_T0004976.1 MGP_129S1SvImJ_G0004271.1 mouse_genomes_project 6 51410659 51456284 + Hoxaas3 antisense antisense MGP_129S1SvImJ_T0004979.1 MGP_129S1SvImJ_G0004271.1 mouse_genomes_project 6 51440912 51454823 + Hoxaas3 antisense antisense MGP_129S1SvImJ_T0000183.1 MGP_129S1SvImJ_G0000139.1 mouse_genomes_project 6 69134167 69134644 - MGP_129S1SvImJ_P0000183 Gm42543 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0004987.1 MGP_129S1SvImJ_G0004279.1 mouse_genomes_project 6 58604550 58611911 + Gm45060 antisense antisense MGP_129S1SvImJ_T0015594.1 MGP_129S1SvImJ_G0013683.1 mouse_genomes_project 6 125371597 125371980 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076580.1 MGP_129S1SvImJ_G0030513.1 mouse_genomes_project 6 26820007 26834944 + MGP_129S1SvImJ_P0076580 Lep protein_coding protein_coding MGP_129S1SvImJ_T0076581.1 MGP_129S1SvImJ_G0030513.1 mouse_genomes_project 6 26825265 26832056 + MGP_129S1SvImJ_P0076581 Lep protein_coding protein_coding MGP_129S1SvImJ_T0000217.1 MGP_129S1SvImJ_G0000167.1 mouse_genomes_project 6 70464583 70465143 - MGP_129S1SvImJ_P0000217 Igkv8-30 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000149.1 MGP_129S1SvImJ_G0000114.1 mouse_genomes_project 6 68004208 68004679 + MGP_129S1SvImJ_P0000149 Igkv14-126 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0076856.1 MGP_129S1SvImJ_G0030557.1 mouse_genomes_project 6 32428480 32442821 + MGP_129S1SvImJ_P0076856 Akr1b8 protein_coding protein_coding MGP_129S1SvImJ_T0076857.1 MGP_129S1SvImJ_G0030557.1 mouse_genomes_project 6 32430476 32439597 + Akr1b8 protein_coding processed_transcript MGP_129S1SvImJ_T0015367.1 MGP_129S1SvImJ_G0013456.1 mouse_genomes_project 6 49721954 49722326 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001984.1 MGP_129S1SvImJ_G0001897.1 mouse_genomes_project 6 43900757 43903299 + TEC TEC MGP_129S1SvImJ_T0076303.1 MGP_129S1SvImJ_G0030457.1 mouse_genomes_project 6 10141005 10146341 + MGP_129S1SvImJ_P0076303 Tmem106b protein_coding protein_coding MGP_129S1SvImJ_T0076304.1 MGP_129S1SvImJ_G0030457.1 mouse_genomes_project 6 10141062 10143200 + MGP_129S1SvImJ_P0076304 Tmem106b protein_coding protein_coding MGP_129S1SvImJ_T0076305.1 MGP_129S1SvImJ_G0030457.1 mouse_genomes_project 6 10141085 10160516 + MGP_129S1SvImJ_P0076305 Tmem106b protein_coding protein_coding MGP_129S1SvImJ_T0076306.1 MGP_129S1SvImJ_G0030457.1 mouse_genomes_project 6 10141097 10146632 + Tmem106b protein_coding retained_intron MGP_129S1SvImJ_T0076307.1 MGP_129S1SvImJ_G0030457.1 mouse_genomes_project 6 10141100 10147617 + Tmem106b protein_coding processed_transcript MGP_129S1SvImJ_T0076308.1 MGP_129S1SvImJ_G0030457.1 mouse_genomes_project 6 10141497 10152899 + MGP_129S1SvImJ_P0076308 Tmem106b protein_coding protein_coding MGP_129S1SvImJ_T0100037.1 MGP_129S1SvImJ_G0038104.1 mouse_genomes_project 6 154188004 154188108 - Gm23462 snRNA snRNA MGP_129S1SvImJ_T0001943.1 MGP_129S1SvImJ_G0001856.1 mouse_genomes_project 6 9971427 9972373 + TEC TEC MGP_129S1SvImJ_T0015374.1 MGP_129S1SvImJ_G0013463.1 mouse_genomes_project 6 52136144 52136737 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000346.1 MGP_129S1SvImJ_G0000288.1 mouse_genomes_project 6 70895299 70895599 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0101298.1 MGP_129S1SvImJ_G0039365.1 mouse_genomes_project 6 153737966 153738103 - Gm23456 snoRNA snoRNA MGP_129S1SvImJ_T0079882.1 MGP_129S1SvImJ_G0031225.1 mouse_genomes_project 6 125394857 125414159 - MGP_129S1SvImJ_P0079882 Phc1 protein_coding protein_coding MGP_129S1SvImJ_T0079883.1 MGP_129S1SvImJ_G0031225.1 mouse_genomes_project 6 125394857 125414159 - MGP_129S1SvImJ_P0079883 Phc1 protein_coding protein_coding MGP_129S1SvImJ_T0079884.1 MGP_129S1SvImJ_G0031225.1 mouse_genomes_project 6 125394864 125416799 - MGP_129S1SvImJ_P0079884 Phc1 protein_coding protein_coding MGP_129S1SvImJ_T0079885.1 MGP_129S1SvImJ_G0031225.1 mouse_genomes_project 6 125394876 125416799 - MGP_129S1SvImJ_P0079885 Phc1 protein_coding protein_coding MGP_129S1SvImJ_T0079886.1 MGP_129S1SvImJ_G0031225.1 mouse_genomes_project 6 125394876 125416010 - MGP_129S1SvImJ_P0079886 Phc1 protein_coding protein_coding MGP_129S1SvImJ_T0079887.1 MGP_129S1SvImJ_G0031225.1 mouse_genomes_project 6 125394976 125416792 - MGP_129S1SvImJ_P0079887 Phc1 protein_coding protein_coding MGP_129S1SvImJ_T0079888.1 MGP_129S1SvImJ_G0031225.1 mouse_genomes_project 6 125395429 125416759 - Phc1 protein_coding retained_intron MGP_129S1SvImJ_T0079889.1 MGP_129S1SvImJ_G0031225.1 mouse_genomes_project 6 125395429 125416759 - MGP_129S1SvImJ_P0079889 Phc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079890.1 MGP_129S1SvImJ_G0031225.1 mouse_genomes_project 6 125395430 125417478 - MGP_129S1SvImJ_P0079890 Phc1 protein_coding protein_coding MGP_129S1SvImJ_T0079891.1 MGP_129S1SvImJ_G0031225.1 mouse_genomes_project 6 125402678 125414063 - MGP_129S1SvImJ_P0079891 Phc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079892.1 MGP_129S1SvImJ_G0031225.1 mouse_genomes_project 6 125403070 125417423 - MGP_129S1SvImJ_P0079892 Phc1 protein_coding protein_coding MGP_129S1SvImJ_T0079893.1 MGP_129S1SvImJ_G0031225.1 mouse_genomes_project 6 125409814 125412288 - Phc1 protein_coding retained_intron MGP_129S1SvImJ_T0079894.1 MGP_129S1SvImJ_G0031225.1 mouse_genomes_project 6 125410537 125417141 - MGP_129S1SvImJ_P0079894 Phc1 protein_coding protein_coding MGP_129S1SvImJ_T0079895.1 MGP_129S1SvImJ_G0031225.1 mouse_genomes_project 6 125411276 125416799 - MGP_129S1SvImJ_P0079895 Phc1 protein_coding protein_coding MGP_129S1SvImJ_T0079896.1 MGP_129S1SvImJ_G0031225.1 mouse_genomes_project 6 125411277 125414440 - MGP_129S1SvImJ_P0079896 Phc1 protein_coding protein_coding MGP_129S1SvImJ_T0079897.1 MGP_129S1SvImJ_G0031225.1 mouse_genomes_project 6 125411281 125416774 - MGP_129S1SvImJ_P0079897 Phc1 protein_coding protein_coding MGP_129S1SvImJ_T0004942.1 MGP_129S1SvImJ_G0004245.1 mouse_genomes_project 6 30296529 30310490 + Plxna4os3 antisense antisense MGP_129S1SvImJ_T0004943.1 MGP_129S1SvImJ_G0004245.1 mouse_genomes_project 6 30296613 30310482 + Plxna4os3 antisense antisense MGP_129S1SvImJ_T0076977.1 MGP_129S1SvImJ_G0030580.1 mouse_genomes_project 6 36316723 36319813 - Atp6v0a4 protein_coding processed_transcript MGP_129S1SvImJ_T0076978.1 MGP_129S1SvImJ_G0030580.1 mouse_genomes_project 6 36316723 36384851 - MGP_129S1SvImJ_P0076978 Atp6v0a4 protein_coding protein_coding MGP_129S1SvImJ_T0076979.1 MGP_129S1SvImJ_G0030580.1 mouse_genomes_project 6 36316723 36399787 - MGP_129S1SvImJ_P0076979 Atp6v0a4 protein_coding protein_coding MGP_129S1SvImJ_T0076980.1 MGP_129S1SvImJ_G0030580.1 mouse_genomes_project 6 36319532 36323654 - Atp6v0a4 protein_coding retained_intron MGP_129S1SvImJ_T0076981.1 MGP_129S1SvImJ_G0030580.1 mouse_genomes_project 6 36350159 36354617 - Atp6v0a4 protein_coding retained_intron MGP_129S1SvImJ_T0076982.1 MGP_129S1SvImJ_G0030580.1 mouse_genomes_project 6 36361321 36369788 - Atp6v0a4 protein_coding retained_intron MGP_129S1SvImJ_T0076983.1 MGP_129S1SvImJ_G0030580.1 mouse_genomes_project 6 36366281 36399690 - Atp6v0a4 protein_coding retained_intron MGP_129S1SvImJ_T0008546.1 MGP_129S1SvImJ_G0006921.1 mouse_genomes_project 6 28999133 29124818 - Lncpint lincRNA lincRNA MGP_129S1SvImJ_T0008548.1 MGP_129S1SvImJ_G0006921.1 mouse_genomes_project 6 29070618 29124777 - Lncpint lincRNA lincRNA MGP_129S1SvImJ_T0008549.1 MGP_129S1SvImJ_G0006921.1 mouse_genomes_project 6 29071571 29124764 - Lncpint lincRNA lincRNA MGP_129S1SvImJ_T0008550.1 MGP_129S1SvImJ_G0006921.1 mouse_genomes_project 6 29071619 29124690 - Lncpint lincRNA lincRNA MGP_129S1SvImJ_T0008526.1 MGP_129S1SvImJ_G0006907.1 mouse_genomes_project 6 14280027 14286218 - Gm15473 lincRNA lincRNA MGP_129S1SvImJ_T0002122.1 MGP_129S1SvImJ_G0002035.1 mouse_genomes_project 6 102712625 102714150 - TEC TEC MGP_129S1SvImJ_T0005049.1 MGP_129S1SvImJ_G0004317.1 mouse_genomes_project 6 90118269 90127719 - Gm26588 antisense antisense MGP_129S1SvImJ_T0005050.1 MGP_129S1SvImJ_G0004317.1 mouse_genomes_project 6 90121089 90126359 - Gm26588 antisense antisense MGP_129S1SvImJ_T0080355.1 MGP_129S1SvImJ_G0031325.1 mouse_genomes_project 6 132008535 132017608 + MGP_129S1SvImJ_P0080355 protein_coding protein_coding MGP_129S1SvImJ_T0080356.1 MGP_129S1SvImJ_G0031325.1 mouse_genomes_project 6 132008547 132017501 + MGP_129S1SvImJ_P0080356 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080357.1 MGP_129S1SvImJ_G0031325.1 mouse_genomes_project 6 132009003 132018317 + MGP_129S1SvImJ_P0080357 protein_coding protein_coding MGP_129S1SvImJ_T0080358.1 MGP_129S1SvImJ_G0031325.1 mouse_genomes_project 6 132009203 132018317 + MGP_129S1SvImJ_P0080358 protein_coding protein_coding MGP_129S1SvImJ_T0080359.1 MGP_129S1SvImJ_G0031325.1 mouse_genomes_project 6 132009281 132018317 + protein_coding retained_intron MGP_129S1SvImJ_T0080360.1 MGP_129S1SvImJ_G0031325.1 mouse_genomes_project 6 132009526 132025753 + MGP_129S1SvImJ_P0080360 protein_coding non_stop_decay MGP_129S1SvImJ_T0078492.1 MGP_129S1SvImJ_G0030962.1 mouse_genomes_project 6 87042258 87046012 - MGP_129S1SvImJ_P0078492 Nat8f5 protein_coding protein_coding MGP_129S1SvImJ_T0011640.1 MGP_129S1SvImJ_G0009756.1 mouse_genomes_project 6 3791699 3791845 - Dlx6os1 misc_RNA misc_RNA MGP_129S1SvImJ_T0098983.1 MGP_129S1SvImJ_G0037057.1 mouse_genomes_project 6 46954983 46955391 - sense_intronic sense_intronic MGP_129S1SvImJ_T0101256.1 MGP_129S1SvImJ_G0039323.1 mouse_genomes_project 6 68438211 68438356 - Gm25436 snoRNA snoRNA MGP_129S1SvImJ_T0008600.1 MGP_129S1SvImJ_G0006955.1 mouse_genomes_project 6 49930109 49934072 - Gm44109 lincRNA lincRNA MGP_129S1SvImJ_T0079999.1 MGP_129S1SvImJ_G0031258.1 mouse_genomes_project 6 127751007 127769957 + MGP_129S1SvImJ_P0079999 C1rl protein_coding protein_coding MGP_129S1SvImJ_T0076670.1 MGP_129S1SvImJ_G0030529.1 mouse_genomes_project 6 27514554 27539665 + MGP_129S1SvImJ_P0076670 Tspan33 protein_coding protein_coding MGP_129S1SvImJ_T0076671.1 MGP_129S1SvImJ_G0030529.1 mouse_genomes_project 6 27514566 27539663 + MGP_129S1SvImJ_P0076671 Tspan33 protein_coding protein_coding MGP_129S1SvImJ_T0076672.1 MGP_129S1SvImJ_G0030529.1 mouse_genomes_project 6 27527760 27535849 + Tspan33 protein_coding retained_intron MGP_129S1SvImJ_T0100036.1 MGP_129S1SvImJ_G0038103.1 mouse_genomes_project 6 154166147 154166254 - Gm22578 snRNA snRNA MGP_129S1SvImJ_T0078599.1 MGP_129S1SvImJ_G0030982.1 mouse_genomes_project 6 88000661 88044289 - MGP_129S1SvImJ_P0078599 Gmcl1 protein_coding protein_coding MGP_129S1SvImJ_T0078600.1 MGP_129S1SvImJ_G0030982.1 mouse_genomes_project 6 88023112 88025872 - Gmcl1 protein_coding retained_intron MGP_129S1SvImJ_T0078601.1 MGP_129S1SvImJ_G0030982.1 mouse_genomes_project 6 88023196 88029476 - Gmcl1 protein_coding retained_intron MGP_129S1SvImJ_T0078602.1 MGP_129S1SvImJ_G0030982.1 mouse_genomes_project 6 88031080 88044146 - MGP_129S1SvImJ_P0078602 Gmcl1 protein_coding protein_coding MGP_129S1SvImJ_T0081134.1 MGP_129S1SvImJ_G0031510.1 mouse_genomes_project 6 154277234 154309946 - MGP_129S1SvImJ_P0081134 Amn1 protein_coding protein_coding MGP_129S1SvImJ_T0081135.1 MGP_129S1SvImJ_G0031510.1 mouse_genomes_project 6 154277354 154294606 - Amn1 protein_coding retained_intron MGP_129S1SvImJ_T0081136.1 MGP_129S1SvImJ_G0031510.1 mouse_genomes_project 6 154277664 154309898 - Amn1 protein_coding processed_transcript MGP_129S1SvImJ_T0081137.1 MGP_129S1SvImJ_G0031510.1 mouse_genomes_project 6 154277665 154309919 - MGP_129S1SvImJ_P0081137 Amn1 protein_coding protein_coding MGP_129S1SvImJ_T0081138.1 MGP_129S1SvImJ_G0031510.1 mouse_genomes_project 6 154277670 154304728 - Amn1 protein_coding processed_transcript MGP_129S1SvImJ_T0081139.1 MGP_129S1SvImJ_G0031510.1 mouse_genomes_project 6 154277686 154304725 - MGP_129S1SvImJ_P0081139 Amn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081140.1 MGP_129S1SvImJ_G0031510.1 mouse_genomes_project 6 154287298 154309915 - Amn1 protein_coding processed_transcript MGP_129S1SvImJ_T0081141.1 MGP_129S1SvImJ_G0031510.1 mouse_genomes_project 6 154290530 154309904 - Amn1 protein_coding retained_intron MGP_129S1SvImJ_T0081142.1 MGP_129S1SvImJ_G0031510.1 mouse_genomes_project 6 154290696 154309929 - Amn1 protein_coding processed_transcript MGP_129S1SvImJ_T0081143.1 MGP_129S1SvImJ_G0031510.1 mouse_genomes_project 6 154292108 154309921 - MGP_129S1SvImJ_P0081143 Amn1 protein_coding protein_coding MGP_129S1SvImJ_T0081144.1 MGP_129S1SvImJ_G0031510.1 mouse_genomes_project 6 154294096 154309936 - Amn1 protein_coding retained_intron MGP_129S1SvImJ_T0080686.1 MGP_129S1SvImJ_G0031434.1 mouse_genomes_project 6 141577603 141691934 - MGP_129S1SvImJ_P0080686 Rerg protein_coding protein_coding MGP_129S1SvImJ_T0080687.1 MGP_129S1SvImJ_G0031434.1 mouse_genomes_project 6 141577609 141691160 - MGP_129S1SvImJ_P0080687 Rerg protein_coding protein_coding MGP_129S1SvImJ_T0080688.1 MGP_129S1SvImJ_G0031434.1 mouse_genomes_project 6 141578882 141691113 - MGP_129S1SvImJ_P0080688 Rerg protein_coding protein_coding MGP_129S1SvImJ_T0080689.1 MGP_129S1SvImJ_G0031434.1 mouse_genomes_project 6 141579172 141661441 - MGP_129S1SvImJ_P0080689 Rerg protein_coding protein_coding MGP_129S1SvImJ_T0080690.1 MGP_129S1SvImJ_G0031434.1 mouse_genomes_project 6 141642202 141691136 - MGP_129S1SvImJ_P0080690 Rerg protein_coding protein_coding MGP_129S1SvImJ_T0077518.1 MGP_129S1SvImJ_G0030734.1 mouse_genomes_project 6 50649569 50658532 - MGP_129S1SvImJ_P0077518 Hnrnpa2b1 protein_coding protein_coding MGP_129S1SvImJ_T0077519.1 MGP_129S1SvImJ_G0030734.1 mouse_genomes_project 6 50649758 50658485 - MGP_129S1SvImJ_P0077519 Hnrnpa2b1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077520.1 MGP_129S1SvImJ_G0030734.1 mouse_genomes_project 6 50649761 50658483 - MGP_129S1SvImJ_P0077520 Hnrnpa2b1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077521.1 MGP_129S1SvImJ_G0030734.1 mouse_genomes_project 6 50649761 50658483 - MGP_129S1SvImJ_P0077521 Hnrnpa2b1 protein_coding protein_coding MGP_129S1SvImJ_T0077522.1 MGP_129S1SvImJ_G0030734.1 mouse_genomes_project 6 50649782 50651822 - Hnrnpa2b1 protein_coding retained_intron MGP_129S1SvImJ_T0077523.1 MGP_129S1SvImJ_G0030734.1 mouse_genomes_project 6 50651397 50658464 - MGP_129S1SvImJ_P0077523 Hnrnpa2b1 protein_coding protein_coding MGP_129S1SvImJ_T0077524.1 MGP_129S1SvImJ_G0030734.1 mouse_genomes_project 6 50651397 50658410 - MGP_129S1SvImJ_P0077524 Hnrnpa2b1 protein_coding protein_coding MGP_129S1SvImJ_T0077525.1 MGP_129S1SvImJ_G0030734.1 mouse_genomes_project 6 50651397 50658410 - MGP_129S1SvImJ_P0077525 Hnrnpa2b1 protein_coding protein_coding MGP_129S1SvImJ_T0077526.1 MGP_129S1SvImJ_G0030734.1 mouse_genomes_project 6 50651437 50652798 - Hnrnpa2b1 protein_coding retained_intron MGP_129S1SvImJ_T0077527.1 MGP_129S1SvImJ_G0030734.1 mouse_genomes_project 6 50652109 50655339 - MGP_129S1SvImJ_P0077527 Hnrnpa2b1 protein_coding protein_coding MGP_129S1SvImJ_T0077528.1 MGP_129S1SvImJ_G0030734.1 mouse_genomes_project 6 50653269 50654875 - Hnrnpa2b1 protein_coding retained_intron MGP_129S1SvImJ_T0077529.1 MGP_129S1SvImJ_G0030734.1 mouse_genomes_project 6 50653639 50655305 - Hnrnpa2b1 protein_coding retained_intron MGP_129S1SvImJ_T0077530.1 MGP_129S1SvImJ_G0030734.1 mouse_genomes_project 6 50654455 50658522 - Hnrnpa2b1 protein_coding retained_intron MGP_129S1SvImJ_T0008768.1 MGP_129S1SvImJ_G0007084.1 mouse_genomes_project 6 143971220 143978197 - 4922502N22Rik lincRNA lincRNA MGP_129S1SvImJ_T0078845.1 MGP_129S1SvImJ_G0031030.1 mouse_genomes_project 6 91608860 91617199 + MGP_129S1SvImJ_P0078845 Vmn1r51 protein_coding protein_coding MGP_129S1SvImJ_T0077754.1 MGP_129S1SvImJ_G0030793.1 mouse_genomes_project 6 56726513 56728044 + MGP_129S1SvImJ_P0077754 Vmn1r14 protein_coding protein_coding MGP_129S1SvImJ_T0008594.1 MGP_129S1SvImJ_G0006951.1 mouse_genomes_project 6 47715794 47716825 + 4833403J16Rik lincRNA lincRNA MGP_129S1SvImJ_T0008734.1 MGP_129S1SvImJ_G0007060.1 mouse_genomes_project 6 125474493 125475802 + 1700063H04Rik lincRNA lincRNA MGP_129S1SvImJ_T0077035.1 MGP_129S1SvImJ_G0030592.1 mouse_genomes_project 6 37218558 37300899 + MGP_129S1SvImJ_P0077035 Tbxas1 protein_coding protein_coding MGP_129S1SvImJ_T0077036.1 MGP_129S1SvImJ_G0030592.1 mouse_genomes_project 6 37265814 37437842 + MGP_129S1SvImJ_P0077036 Tbxas1 protein_coding protein_coding MGP_129S1SvImJ_T0077037.1 MGP_129S1SvImJ_G0030592.1 mouse_genomes_project 6 37265839 37378455 + Tbxas1 protein_coding retained_intron MGP_129S1SvImJ_T0077038.1 MGP_129S1SvImJ_G0030592.1 mouse_genomes_project 6 37265858 37437842 + Tbxas1 protein_coding retained_intron MGP_129S1SvImJ_T0077039.1 MGP_129S1SvImJ_G0030592.1 mouse_genomes_project 6 37289337 37349279 + MGP_129S1SvImJ_P0077039 Tbxas1 protein_coding protein_coding MGP_129S1SvImJ_T0077040.1 MGP_129S1SvImJ_G0030592.1 mouse_genomes_project 6 37319792 37331459 + Tbxas1 protein_coding processed_transcript MGP_129S1SvImJ_T0077041.1 MGP_129S1SvImJ_G0030592.1 mouse_genomes_project 6 37331242 37426467 + Tbxas1 protein_coding retained_intron MGP_129S1SvImJ_T0004992.1 MGP_129S1SvImJ_G0004284.1 mouse_genomes_project 6 67155260 67156103 - antisense antisense MGP_129S1SvImJ_T0015357.1 MGP_129S1SvImJ_G0013446.1 mouse_genomes_project 6 47963849 47964939 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008604.1 MGP_129S1SvImJ_G0006958.1 mouse_genomes_project 6 50555374 50572561 + Gm6559 lincRNA lincRNA MGP_129S1SvImJ_T0008513.1 MGP_129S1SvImJ_G0006898.1 mouse_genomes_project 6 4212917 4217763 + Gm19272 lincRNA lincRNA MGP_129S1SvImJ_T0008514.1 MGP_129S1SvImJ_G0006898.1 mouse_genomes_project 6 4212917 4220789 + Gm19272 lincRNA lincRNA MGP_129S1SvImJ_T0077232.1 MGP_129S1SvImJ_G0030656.1 mouse_genomes_project 6 41060149 41061103 - MGP_129S1SvImJ_P0077232 Olfr455 protein_coding protein_coding MGP_129S1SvImJ_T0079158.1 MGP_129S1SvImJ_G0031094.1 mouse_genomes_project 6 108947967 108986499 - MGP_129S1SvImJ_P0079158 Il5ra protein_coding protein_coding MGP_129S1SvImJ_T0079159.1 MGP_129S1SvImJ_G0031094.1 mouse_genomes_project 6 108948215 108986410 - MGP_129S1SvImJ_P0079159 Il5ra protein_coding protein_coding MGP_129S1SvImJ_T0079160.1 MGP_129S1SvImJ_G0031094.1 mouse_genomes_project 6 108949583 108982587 - MGP_129S1SvImJ_P0079160 Il5ra protein_coding protein_coding MGP_129S1SvImJ_T0018325.1 MGP_129S1SvImJ_G0015641.1 mouse_genomes_project 6 73180620 73188149 + Gm20536 processed_transcript processed_transcript MGP_129S1SvImJ_T0015383.1 MGP_129S1SvImJ_G0013472.1 mouse_genomes_project 6 58060450 58060880 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077374.1 MGP_129S1SvImJ_G0030697.1 mouse_genomes_project 6 47519781 47522732 - Rarres2 protein_coding retained_intron MGP_129S1SvImJ_T0077375.1 MGP_129S1SvImJ_G0030697.1 mouse_genomes_project 6 47519781 47522774 - MGP_129S1SvImJ_P0077375 Rarres2 protein_coding protein_coding MGP_129S1SvImJ_T0077376.1 MGP_129S1SvImJ_G0030697.1 mouse_genomes_project 6 47519781 47522841 - MGP_129S1SvImJ_P0077376 Rarres2 protein_coding protein_coding MGP_129S1SvImJ_T0077377.1 MGP_129S1SvImJ_G0030697.1 mouse_genomes_project 6 47519781 47522873 - MGP_129S1SvImJ_P0077377 Rarres2 protein_coding protein_coding MGP_129S1SvImJ_T0077378.1 MGP_129S1SvImJ_G0030697.1 mouse_genomes_project 6 47519795 47522875 - MGP_129S1SvImJ_P0077378 Rarres2 protein_coding protein_coding MGP_129S1SvImJ_T0015405.1 MGP_129S1SvImJ_G0013494.1 mouse_genomes_project 6 65079000 65079229 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015485.1 MGP_129S1SvImJ_G0013574.1 mouse_genomes_project 6 84828521 84828899 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002093.1 MGP_129S1SvImJ_G0002006.1 mouse_genomes_project 6 90144570 90147458 + TEC TEC MGP_129S1SvImJ_T0015688.1 MGP_129S1SvImJ_G0013777.1 mouse_genomes_project 6 154154582 154154905 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081048.1 MGP_129S1SvImJ_G0031496.1 mouse_genomes_project 6 152082007 152089824 + Mrps35 protein_coding retained_intron MGP_129S1SvImJ_T0081049.1 MGP_129S1SvImJ_G0031496.1 mouse_genomes_project 6 152082007 152113824 + MGP_129S1SvImJ_P0081049 Mrps35 protein_coding protein_coding MGP_129S1SvImJ_T0081050.1 MGP_129S1SvImJ_G0031496.1 mouse_genomes_project 6 152083834 152095207 + MGP_129S1SvImJ_P0081050 Mrps35 protein_coding protein_coding MGP_129S1SvImJ_T0081051.1 MGP_129S1SvImJ_G0031496.1 mouse_genomes_project 6 152099569 152109898 + Mrps35 protein_coding processed_transcript MGP_129S1SvImJ_T0081052.1 MGP_129S1SvImJ_G0031496.1 mouse_genomes_project 6 152100581 152109977 + Mrps35 protein_coding processed_transcript MGP_129S1SvImJ_T0010788.1 MGP_129S1SvImJ_G0008904.1 mouse_genomes_project 6 51471256 51471341 - Mir196b miRNA miRNA MGP_129S1SvImJ_T0015278.1 MGP_129S1SvImJ_G0013367.1 mouse_genomes_project 6 11106766 11107115 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002183.1 MGP_129S1SvImJ_G0002095.1 mouse_genomes_project 6 139656518 139656774 - TEC TEC MGP_129S1SvImJ_T0078211.1 MGP_129S1SvImJ_G0030909.1 mouse_genomes_project 6 84033614 84036152 - MGP_129S1SvImJ_P0078211 Dok1 protein_coding protein_coding MGP_129S1SvImJ_T0078212.1 MGP_129S1SvImJ_G0030909.1 mouse_genomes_project 6 84033620 84036149 - MGP_129S1SvImJ_P0078212 Dok1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078213.1 MGP_129S1SvImJ_G0030909.1 mouse_genomes_project 6 84034531 84035242 - MGP_129S1SvImJ_P0078213 Dok1 protein_coding protein_coding MGP_129S1SvImJ_T0101234.1 MGP_129S1SvImJ_G0039301.1 mouse_genomes_project 6 25339560 25339677 + Gm26310 snoRNA snoRNA MGP_129S1SvImJ_T0002162.1 MGP_129S1SvImJ_G0002074.1 mouse_genomes_project 6 128408366 128408959 + TEC TEC MGP_129S1SvImJ_T0010830.1 MGP_129S1SvImJ_G0008946.1 mouse_genomes_project 6 128575633 128575762 - Mir8113 miRNA miRNA MGP_129S1SvImJ_T0077150.1 MGP_129S1SvImJ_G0030628.1 mouse_genomes_project 6 39947480 39951534 - MGP_129S1SvImJ_P0077150 protein_coding protein_coding MGP_129S1SvImJ_T0000316.1 MGP_129S1SvImJ_G0000258.1 mouse_genomes_project 6 68688619 68688918 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0002048.1 MGP_129S1SvImJ_G0001961.1 mouse_genomes_project 6 78504161 78506956 - TEC TEC MGP_129S1SvImJ_T0080519.1 MGP_129S1SvImJ_G0031381.1 mouse_genomes_project 6 136757300 136758192 + MGP_129S1SvImJ_P0080519 Tas2r120 protein_coding protein_coding MGP_129S1SvImJ_T0080803.1 MGP_129S1SvImJ_G0031451.1 mouse_genomes_project 6 145994660 146264224 + MGP_129S1SvImJ_P0080803 Pde3a protein_coding protein_coding MGP_129S1SvImJ_T0080804.1 MGP_129S1SvImJ_G0031451.1 mouse_genomes_project 6 145995357 146225559 + Pde3a protein_coding retained_intron MGP_129S1SvImJ_T0079373.1 MGP_129S1SvImJ_G0031134.1 mouse_genomes_project 6 116177571 116239541 + MGP_129S1SvImJ_P0079373 Irak2 protein_coding protein_coding MGP_129S1SvImJ_T0079374.1 MGP_129S1SvImJ_G0031134.1 mouse_genomes_project 6 116177584 116210578 + Irak2 protein_coding retained_intron MGP_129S1SvImJ_T0079375.1 MGP_129S1SvImJ_G0031134.1 mouse_genomes_project 6 116177619 116217584 + MGP_129S1SvImJ_P0079375 Irak2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079376.1 MGP_129S1SvImJ_G0031134.1 mouse_genomes_project 6 116177631 116239523 + MGP_129S1SvImJ_P0079376 Irak2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0079377.1 MGP_129S1SvImJ_G0031134.1 mouse_genomes_project 6 116213400 116217490 + Irak2 protein_coding processed_transcript MGP_129S1SvImJ_T0079378.1 MGP_129S1SvImJ_G0031134.1 mouse_genomes_project 6 116214328 116239541 + Irak2 protein_coding retained_intron MGP_129S1SvImJ_T0079379.1 MGP_129S1SvImJ_G0031134.1 mouse_genomes_project 6 116236486 116239656 + Irak2 protein_coding retained_intron MGP_129S1SvImJ_T0079380.1 MGP_129S1SvImJ_G0031134.1 mouse_genomes_project 6 116238500 116239750 + Irak2 protein_coding processed_transcript MGP_129S1SvImJ_T0011646.1 MGP_129S1SvImJ_G0009762.1 mouse_genomes_project 6 14954963 14955142 + Gm27365 misc_RNA misc_RNA MGP_129S1SvImJ_T0011637.1 MGP_129S1SvImJ_G0009753.1 mouse_genomes_project 6 1127252 1127579 + Gm24442 misc_RNA misc_RNA MGP_129S1SvImJ_T0077963.1 MGP_129S1SvImJ_G0030858.1 mouse_genomes_project 6 71867109 71921015 - MGP_129S1SvImJ_P0077963 Rmnd5a protein_coding protein_coding MGP_129S1SvImJ_T0077964.1 MGP_129S1SvImJ_G0030858.1 mouse_genomes_project 6 71868940 71874756 - Rmnd5a protein_coding processed_transcript MGP_129S1SvImJ_T0077965.1 MGP_129S1SvImJ_G0030858.1 mouse_genomes_project 6 71869807 71874661 - Rmnd5a protein_coding processed_transcript MGP_129S1SvImJ_T0077966.1 MGP_129S1SvImJ_G0030858.1 mouse_genomes_project 6 71872933 71875672 - Rmnd5a protein_coding retained_intron MGP_129S1SvImJ_T0000307.1 MGP_129S1SvImJ_G0000249.1 mouse_genomes_project 6 68357059 68357524 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0008743.1 MGP_129S1SvImJ_G0007069.1 mouse_genomes_project 6 131419553 131423195 - Gm42810 lincRNA lincRNA MGP_129S1SvImJ_T0100015.1 MGP_129S1SvImJ_G0038082.1 mouse_genomes_project 6 104959104 104959212 + Gm26022 snRNA snRNA MGP_129S1SvImJ_T0008575.1 MGP_129S1SvImJ_G0006941.1 mouse_genomes_project 6 34361805 34545924 - lincRNA lincRNA MGP_129S1SvImJ_T0008576.1 MGP_129S1SvImJ_G0006941.1 mouse_genomes_project 6 34364163 34426991 - lincRNA lincRNA MGP_129S1SvImJ_T0008577.1 MGP_129S1SvImJ_G0006941.1 mouse_genomes_project 6 34421242 34546165 - lincRNA lincRNA MGP_129S1SvImJ_T0008578.1 MGP_129S1SvImJ_G0006941.1 mouse_genomes_project 6 34490711 34546307 - lincRNA lincRNA MGP_129S1SvImJ_T0008579.1 MGP_129S1SvImJ_G0006941.1 mouse_genomes_project 6 34545451 34546361 - lincRNA lincRNA MGP_129S1SvImJ_T0008580.1 MGP_129S1SvImJ_G0006941.1 mouse_genomes_project 6 34545453 34548264 - lincRNA lincRNA MGP_129S1SvImJ_T0008581.1 MGP_129S1SvImJ_G0006941.1 mouse_genomes_project 6 34545460 34546990 - lincRNA lincRNA MGP_129S1SvImJ_T0008582.1 MGP_129S1SvImJ_G0006941.1 mouse_genomes_project 6 34545738 34547500 - lincRNA lincRNA MGP_129S1SvImJ_T0008583.1 MGP_129S1SvImJ_G0006941.1 mouse_genomes_project 6 34545812 34547131 - lincRNA lincRNA MGP_129S1SvImJ_T0077226.1 MGP_129S1SvImJ_G0030652.1 mouse_genomes_project 6 40956050 40956980 + MGP_129S1SvImJ_P0077226 Tas2r126 protein_coding protein_coding MGP_129S1SvImJ_T0001970.1 MGP_129S1SvImJ_G0001883.1 mouse_genomes_project 6 31454954 31456566 + TEC TEC MGP_129S1SvImJ_T0002099.1 MGP_129S1SvImJ_G0002012.1 mouse_genomes_project 6 91914296 91916822 + TEC TEC MGP_129S1SvImJ_T0001942.1 MGP_129S1SvImJ_G0001855.1 mouse_genomes_project 6 4740732 4742604 + TEC TEC MGP_129S1SvImJ_T0015493.1 MGP_129S1SvImJ_G0013582.1 mouse_genomes_project 6 86209867 86210009 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015330.1 MGP_129S1SvImJ_G0013419.1 mouse_genomes_project 6 39499766 39500147 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008667.1 MGP_129S1SvImJ_G0007008.1 mouse_genomes_project 6 87996489 87997094 - Gm44214 lincRNA lincRNA MGP_129S1SvImJ_T0005057.1 MGP_129S1SvImJ_G0004324.1 mouse_genomes_project 6 94617947 94964168 + antisense antisense MGP_129S1SvImJ_T0005058.1 MGP_129S1SvImJ_G0004324.1 mouse_genomes_project 6 94617987 94964078 + antisense antisense MGP_129S1SvImJ_T0005059.1 MGP_129S1SvImJ_G0004324.1 mouse_genomes_project 6 94618197 94796511 + antisense antisense MGP_129S1SvImJ_T0005060.1 MGP_129S1SvImJ_G0004324.1 mouse_genomes_project 6 94618201 94964166 + antisense antisense MGP_129S1SvImJ_T0005061.1 MGP_129S1SvImJ_G0004324.1 mouse_genomes_project 6 94618201 94796794 + antisense antisense MGP_129S1SvImJ_T0005062.1 MGP_129S1SvImJ_G0004324.1 mouse_genomes_project 6 94618201 94830592 + antisense antisense MGP_129S1SvImJ_T0018266.1 MGP_129S1SvImJ_G0015626.1 mouse_genomes_project 6 29126694 29249367 + 2210408F21Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018267.1 MGP_129S1SvImJ_G0015626.1 mouse_genomes_project 6 29126694 29249336 + 2210408F21Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018268.1 MGP_129S1SvImJ_G0015626.1 mouse_genomes_project 6 29126694 29249210 + 2210408F21Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018269.1 MGP_129S1SvImJ_G0015626.1 mouse_genomes_project 6 29126700 29249355 + 2210408F21Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018270.1 MGP_129S1SvImJ_G0015626.1 mouse_genomes_project 6 29126748 29249348 + 2210408F21Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018271.1 MGP_129S1SvImJ_G0015626.1 mouse_genomes_project 6 29126748 29249340 + 2210408F21Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018272.1 MGP_129S1SvImJ_G0015626.1 mouse_genomes_project 6 29126765 29249273 + 2210408F21Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018273.1 MGP_129S1SvImJ_G0015626.1 mouse_genomes_project 6 29126765 29240272 + 2210408F21Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018274.1 MGP_129S1SvImJ_G0015626.1 mouse_genomes_project 6 29126778 29249360 + 2210408F21Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018275.1 MGP_129S1SvImJ_G0015626.1 mouse_genomes_project 6 29126784 29249336 + 2210408F21Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018276.1 MGP_129S1SvImJ_G0015626.1 mouse_genomes_project 6 29126790 29249363 + 2210408F21Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018277.1 MGP_129S1SvImJ_G0015626.1 mouse_genomes_project 6 29189836 29205191 + 2210408F21Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018278.1 MGP_129S1SvImJ_G0015626.1 mouse_genomes_project 6 29196992 29249366 + 2210408F21Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018279.1 MGP_129S1SvImJ_G0015626.1 mouse_genomes_project 6 29204504 29205637 + 2210408F21Rik processed_transcript TEC MGP_129S1SvImJ_T0018280.1 MGP_129S1SvImJ_G0015626.1 mouse_genomes_project 6 29233926 29249348 + 2210408F21Rik processed_transcript lincRNA MGP_129S1SvImJ_T0015416.1 MGP_129S1SvImJ_G0013505.1 mouse_genomes_project 6 65935178 65935872 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015337.1 MGP_129S1SvImJ_G0013426.1 mouse_genomes_project 6 41829327 41859756 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080473.1 MGP_129S1SvImJ_G0031356.1 mouse_genomes_project 6 133318656 133349162 - MGP_129S1SvImJ_P0080473 protein_coding protein_coding MGP_129S1SvImJ_T0102596.1 MGP_129S1SvImJ_G0040429.1 mouse_genomes_project 6 39493658 39494300 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0078491.1 MGP_129S1SvImJ_G0030961.1 mouse_genomes_project 6 86972263 86972946 - MGP_129S1SvImJ_P0078491 protein_coding protein_coding MGP_129S1SvImJ_T0008610.1 MGP_129S1SvImJ_G0006963.1 mouse_genomes_project 6 51330141 51339629 + Halr1 lincRNA lincRNA MGP_129S1SvImJ_T0008611.1 MGP_129S1SvImJ_G0006963.1 mouse_genomes_project 6 51330186 51340773 + Halr1 lincRNA lincRNA MGP_129S1SvImJ_T0008612.1 MGP_129S1SvImJ_G0006963.1 mouse_genomes_project 6 51330195 51339289 + Halr1 lincRNA lincRNA MGP_129S1SvImJ_T0000220.1 MGP_129S1SvImJ_G0000170.1 mouse_genomes_project 6 70529378 70529689 - MGP_129S1SvImJ_P0000220 Igkv8-27 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000224.1 MGP_129S1SvImJ_G0000170.1 mouse_genomes_project 6 70529378 70529678 - MGP_129S1SvImJ_P0000224 Igkv8-27 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0080792.1 MGP_129S1SvImJ_G0031449.1 mouse_genomes_project 6 145353413 145391265 + MGP_129S1SvImJ_P0080792 Aebp2 protein_coding protein_coding MGP_129S1SvImJ_T0080793.1 MGP_129S1SvImJ_G0031449.1 mouse_genomes_project 6 145354249 145388610 + MGP_129S1SvImJ_P0080793 Aebp2 protein_coding protein_coding MGP_129S1SvImJ_T0080794.1 MGP_129S1SvImJ_G0031449.1 mouse_genomes_project 6 145354439 145416075 + MGP_129S1SvImJ_P0080794 Aebp2 protein_coding protein_coding MGP_129S1SvImJ_T0080795.1 MGP_129S1SvImJ_G0031449.1 mouse_genomes_project 6 145355048 145415018 + MGP_129S1SvImJ_P0080795 Aebp2 protein_coding protein_coding MGP_129S1SvImJ_T0080796.1 MGP_129S1SvImJ_G0031449.1 mouse_genomes_project 6 145355659 145387528 + MGP_129S1SvImJ_P0080796 Aebp2 protein_coding protein_coding MGP_129S1SvImJ_T0080797.1 MGP_129S1SvImJ_G0031449.1 mouse_genomes_project 6 145357641 145388610 + MGP_129S1SvImJ_P0080797 Aebp2 protein_coding protein_coding MGP_129S1SvImJ_T0080798.1 MGP_129S1SvImJ_G0031449.1 mouse_genomes_project 6 145368393 145369824 + Aebp2 protein_coding retained_intron MGP_129S1SvImJ_T0080799.1 MGP_129S1SvImJ_G0031449.1 mouse_genomes_project 6 145369407 145390202 + MGP_129S1SvImJ_P0080799 Aebp2 protein_coding protein_coding MGP_129S1SvImJ_T0080800.1 MGP_129S1SvImJ_G0031449.1 mouse_genomes_project 6 145376843 145387814 + Aebp2 protein_coding processed_transcript MGP_129S1SvImJ_T0080801.1 MGP_129S1SvImJ_G0031449.1 mouse_genomes_project 6 145382600 145384174 + Aebp2 protein_coding processed_transcript MGP_129S1SvImJ_T0101231.1 MGP_129S1SvImJ_G0039298.1 mouse_genomes_project 6 22457464 22457595 - Gm22267 snoRNA snoRNA MGP_129S1SvImJ_T0080841.1 MGP_129S1SvImJ_G0031462.1 mouse_genomes_project 6 147138560 147176143 - MGP_129S1SvImJ_P0080841 Recql protein_coding protein_coding MGP_129S1SvImJ_T0080843.1 MGP_129S1SvImJ_G0031462.1 mouse_genomes_project 6 147145165 147176181 - MGP_129S1SvImJ_P0080843 Recql protein_coding protein_coding MGP_129S1SvImJ_T0080844.1 MGP_129S1SvImJ_G0031462.1 mouse_genomes_project 6 147145169 147155008 - MGP_129S1SvImJ_P0080844 Recql protein_coding protein_coding MGP_129S1SvImJ_T0080845.1 MGP_129S1SvImJ_G0031462.1 mouse_genomes_project 6 147146078 147151881 - Recql protein_coding processed_transcript MGP_129S1SvImJ_T0080846.1 MGP_129S1SvImJ_G0031462.1 mouse_genomes_project 6 147149594 147176194 - MGP_129S1SvImJ_P0080846 Recql protein_coding protein_coding MGP_129S1SvImJ_T0080847.1 MGP_129S1SvImJ_G0031462.1 mouse_genomes_project 6 147150339 147151793 - MGP_129S1SvImJ_P0080847 Recql protein_coding protein_coding MGP_129S1SvImJ_T0080848.1 MGP_129S1SvImJ_G0031462.1 mouse_genomes_project 6 147150976 147152436 - Recql protein_coding retained_intron MGP_129S1SvImJ_T0080849.1 MGP_129S1SvImJ_G0031462.1 mouse_genomes_project 6 147152839 147156783 - Recql protein_coding processed_transcript MGP_129S1SvImJ_T0080850.1 MGP_129S1SvImJ_G0031462.1 mouse_genomes_project 6 147155537 147155949 - Recql protein_coding retained_intron MGP_129S1SvImJ_T0080851.1 MGP_129S1SvImJ_G0031462.1 mouse_genomes_project 6 147163038 147176116 - MGP_129S1SvImJ_P0080851 Recql protein_coding protein_coding MGP_129S1SvImJ_T0080852.1 MGP_129S1SvImJ_G0031462.1 mouse_genomes_project 6 147163038 147176081 - MGP_129S1SvImJ_P0080852 Recql protein_coding protein_coding MGP_129S1SvImJ_T0080853.1 MGP_129S1SvImJ_G0031462.1 mouse_genomes_project 6 147165137 147176189 - MGP_129S1SvImJ_P0080853 Recql protein_coding protein_coding MGP_129S1SvImJ_T0077584.1 MGP_129S1SvImJ_G0030751.1 mouse_genomes_project 6 51566830 51571711 + MGP_129S1SvImJ_P0077584 Evx1 protein_coding protein_coding MGP_129S1SvImJ_T0077585.1 MGP_129S1SvImJ_G0030751.1 mouse_genomes_project 6 51566884 51569977 + MGP_129S1SvImJ_P0077585 Evx1 protein_coding protein_coding MGP_129S1SvImJ_T0004933.1 MGP_129S1SvImJ_G0004237.1 mouse_genomes_project 6 15727481 15730648 + Gm15594 antisense antisense MGP_129S1SvImJ_T0005007.1 MGP_129S1SvImJ_G0004296.1 mouse_genomes_project 6 84114047 84116494 - Ccdc142os antisense antisense MGP_129S1SvImJ_T0005008.1 MGP_129S1SvImJ_G0004296.1 mouse_genomes_project 6 84114058 84116493 - Ccdc142os antisense antisense MGP_129S1SvImJ_T0005009.1 MGP_129S1SvImJ_G0004296.1 mouse_genomes_project 6 84114306 84116427 - Ccdc142os antisense antisense MGP_129S1SvImJ_T0005010.1 MGP_129S1SvImJ_G0004296.1 mouse_genomes_project 6 84115186 84116494 - Ccdc142os antisense antisense MGP_129S1SvImJ_T0002130.1 MGP_129S1SvImJ_G0002043.1 mouse_genomes_project 6 103641616 103643725 + TEC TEC MGP_129S1SvImJ_T0080432.1 MGP_129S1SvImJ_G0031345.1 mouse_genomes_project 6 133043374 133055233 - MGP_129S1SvImJ_P0080432 Clec12b protein_coding protein_coding MGP_129S1SvImJ_T0080433.1 MGP_129S1SvImJ_G0031345.1 mouse_genomes_project 6 133043662 133055604 - MGP_129S1SvImJ_P0080433 Clec12b protein_coding protein_coding MGP_129S1SvImJ_T0015492.1 MGP_129S1SvImJ_G0013581.1 mouse_genomes_project 6 86205175 86205719 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077512.1 MGP_129S1SvImJ_G0030730.1 mouse_genomes_project 6 49680639 49687724 - MGP_129S1SvImJ_P0077512 protein_coding protein_coding MGP_129S1SvImJ_T0000315.1 MGP_129S1SvImJ_G0000257.1 mouse_genomes_project 6 68686514 68686772 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0015431.1 MGP_129S1SvImJ_G0013520.1 mouse_genomes_project 6 67415476 67416058 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081087.1 MGP_129S1SvImJ_G0031504.1 mouse_genomes_project 6 153871776 153890943 - Ipo8 protein_coding retained_intron MGP_129S1SvImJ_T0081088.1 MGP_129S1SvImJ_G0031504.1 mouse_genomes_project 6 153871776 153934060 - MGP_129S1SvImJ_P0081088 Ipo8 protein_coding protein_coding MGP_129S1SvImJ_T0081089.1 MGP_129S1SvImJ_G0031504.1 mouse_genomes_project 6 153871786 153876703 - Ipo8 protein_coding retained_intron MGP_129S1SvImJ_T0081090.1 MGP_129S1SvImJ_G0031504.1 mouse_genomes_project 6 153877380 153879785 - Ipo8 protein_coding retained_intron MGP_129S1SvImJ_T0081091.1 MGP_129S1SvImJ_G0031504.1 mouse_genomes_project 6 153877989 153883706 - Ipo8 protein_coding retained_intron MGP_129S1SvImJ_T0081092.1 MGP_129S1SvImJ_G0031504.1 mouse_genomes_project 6 153885537 153900640 - Ipo8 protein_coding retained_intron MGP_129S1SvImJ_T0081093.1 MGP_129S1SvImJ_G0031504.1 mouse_genomes_project 6 153891896 153927157 - Ipo8 protein_coding retained_intron MGP_129S1SvImJ_T0081094.1 MGP_129S1SvImJ_G0031504.1 mouse_genomes_project 6 153903749 153920468 - Ipo8 protein_coding processed_transcript MGP_129S1SvImJ_T0081095.1 MGP_129S1SvImJ_G0031504.1 mouse_genomes_project 6 153903750 153934057 - MGP_129S1SvImJ_P0081095 Ipo8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081096.1 MGP_129S1SvImJ_G0031504.1 mouse_genomes_project 6 153903752 153934019 - MGP_129S1SvImJ_P0081096 Ipo8 protein_coding protein_coding MGP_129S1SvImJ_T0081097.1 MGP_129S1SvImJ_G0031504.1 mouse_genomes_project 6 153921999 153924905 - Ipo8 protein_coding retained_intron MGP_129S1SvImJ_T0002167.1 MGP_129S1SvImJ_G0002079.1 mouse_genomes_project 6 131308904 131311182 - TEC TEC MGP_129S1SvImJ_T0078259.1 MGP_129S1SvImJ_G0030916.1 mouse_genomes_project 6 84090123 84091987 + MGP_129S1SvImJ_P0078259 Lbx2 protein_coding protein_coding MGP_129S1SvImJ_T0078260.1 MGP_129S1SvImJ_G0030916.1 mouse_genomes_project 6 84091081 84091840 + Lbx2 protein_coding processed_transcript MGP_129S1SvImJ_T0018351.1 MGP_129S1SvImJ_G0015651.1 mouse_genomes_project 6 133201671 133203539 - 1700101I11Rik processed_transcript TEC MGP_129S1SvImJ_T0018352.1 MGP_129S1SvImJ_G0015651.1 mouse_genomes_project 6 133201815 133203006 - 1700101I11Rik processed_transcript antisense MGP_129S1SvImJ_T0002055.1 MGP_129S1SvImJ_G0001968.1 mouse_genomes_project 6 81195087 81196749 + TEC TEC MGP_129S1SvImJ_T0015498.1 MGP_129S1SvImJ_G0013587.1 mouse_genomes_project 6 87117403 87118039 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015631.1 MGP_129S1SvImJ_G0013720.1 mouse_genomes_project 6 132386211 132386328 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015469.1 MGP_129S1SvImJ_G0013558.1 mouse_genomes_project 6 76843226 76844499 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010810.1 MGP_129S1SvImJ_G0008926.1 mouse_genomes_project 6 104893342 104893444 + Mir6373 miRNA miRNA MGP_129S1SvImJ_T0080506.1 MGP_129S1SvImJ_G0031370.1 mouse_genomes_project 6 135506022 135511428 + MGP_129S1SvImJ_P0080506 protein_coding protein_coding MGP_129S1SvImJ_T0010832.1 MGP_129S1SvImJ_G0008948.1 mouse_genomes_project 6 131652750 131652860 - Gm26338 miRNA miRNA MGP_129S1SvImJ_T0005048.1 MGP_129S1SvImJ_G0004316.1 mouse_genomes_project 6 89901019 89901692 + Gm44170 antisense antisense MGP_129S1SvImJ_T0002168.1 MGP_129S1SvImJ_G0002080.1 mouse_genomes_project 6 131312512 131314763 - TEC TEC MGP_129S1SvImJ_T0078652.1 MGP_129S1SvImJ_G0030992.1 mouse_genomes_project 6 88774378 88783102 + MGP_129S1SvImJ_P0078652 Bmp10 protein_coding protein_coding MGP_129S1SvImJ_T0001996.1 MGP_129S1SvImJ_G0001909.1 mouse_genomes_project 6 44813841 44816046 + TEC TEC MGP_129S1SvImJ_T0080968.1 MGP_129S1SvImJ_G0031482.1 mouse_genomes_project 6 150770178 150847820 + MGP_129S1SvImJ_P0080968 Rassf8 protein_coding protein_coding MGP_129S1SvImJ_T0080969.1 MGP_129S1SvImJ_G0031482.1 mouse_genomes_project 6 150773988 150841929 + MGP_129S1SvImJ_P0080969 Rassf8 protein_coding protein_coding MGP_129S1SvImJ_T0080970.1 MGP_129S1SvImJ_G0031482.1 mouse_genomes_project 6 150834903 150844325 + MGP_129S1SvImJ_P0080970 Rassf8 protein_coding protein_coding MGP_129S1SvImJ_T0080971.1 MGP_129S1SvImJ_G0031482.1 mouse_genomes_project 6 150846684 150847815 + MGP_129S1SvImJ_P0080971 Rassf8 protein_coding protein_coding MGP_129S1SvImJ_T0008644.1 MGP_129S1SvImJ_G0006991.1 mouse_genomes_project 6 74064074 74084389 - lincRNA lincRNA MGP_129S1SvImJ_T0002017.1 MGP_129S1SvImJ_G0001930.1 mouse_genomes_project 6 57201166 57203992 - TEC TEC MGP_129S1SvImJ_T0015370.1 MGP_129S1SvImJ_G0013459.1 mouse_genomes_project 6 51346359 51347009 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002203.1 MGP_129S1SvImJ_G0002115.1 mouse_genomes_project 6 150978029 150980900 + TEC TEC MGP_129S1SvImJ_T0077291.1 MGP_129S1SvImJ_G0030681.1 mouse_genomes_project 6 46344482 46389950 + MGP_129S1SvImJ_P0077291 Cul1 protein_coding protein_coding MGP_129S1SvImJ_T0077292.1 MGP_129S1SvImJ_G0030681.1 mouse_genomes_project 6 46344576 46373718 + MGP_129S1SvImJ_P0077292 Cul1 protein_coding protein_coding MGP_129S1SvImJ_T0077293.1 MGP_129S1SvImJ_G0030681.1 mouse_genomes_project 6 46344988 46418809 + MGP_129S1SvImJ_P0077293 Cul1 protein_coding protein_coding MGP_129S1SvImJ_T0077294.1 MGP_129S1SvImJ_G0030681.1 mouse_genomes_project 6 46345404 46421182 + MGP_129S1SvImJ_P0077294 Cul1 protein_coding protein_coding MGP_129S1SvImJ_T0077295.1 MGP_129S1SvImJ_G0030681.1 mouse_genomes_project 6 46345472 46373930 + MGP_129S1SvImJ_P0077295 Cul1 protein_coding protein_coding MGP_129S1SvImJ_T0077296.1 MGP_129S1SvImJ_G0030681.1 mouse_genomes_project 6 46409852 46421101 + Cul1 protein_coding processed_transcript MGP_129S1SvImJ_T0077297.1 MGP_129S1SvImJ_G0030681.1 mouse_genomes_project 6 46412035 46414823 + Cul1 protein_coding retained_intron MGP_129S1SvImJ_T0077298.1 MGP_129S1SvImJ_G0030681.1 mouse_genomes_project 6 46414739 46418324 + Cul1 protein_coding retained_intron MGP_129S1SvImJ_T0077299.1 MGP_129S1SvImJ_G0030681.1 mouse_genomes_project 6 46418606 46420822 + Cul1 protein_coding processed_transcript MGP_129S1SvImJ_T0008653.1 MGP_129S1SvImJ_G0006999.1 mouse_genomes_project 6 83808097 83824872 + Gm43878 lincRNA lincRNA MGP_129S1SvImJ_T0008654.1 MGP_129S1SvImJ_G0006999.1 mouse_genomes_project 6 83817875 83824884 + Gm43878 lincRNA lincRNA MGP_129S1SvImJ_T0008655.1 MGP_129S1SvImJ_G0006999.1 mouse_genomes_project 6 83817910 83827713 + Gm43878 lincRNA lincRNA MGP_129S1SvImJ_T0008701.1 MGP_129S1SvImJ_G0007033.1 mouse_genomes_project 6 103095417 103157386 + Gm43950 lincRNA lincRNA MGP_129S1SvImJ_T0077661.1 MGP_129S1SvImJ_G0030766.1 mouse_genomes_project 6 54311090 54364770 - MGP_129S1SvImJ_P0077661 Nod1 protein_coding protein_coding MGP_129S1SvImJ_T0077662.1 MGP_129S1SvImJ_G0030766.1 mouse_genomes_project 6 54311090 54365721 - MGP_129S1SvImJ_P0077662 Nod1 protein_coding protein_coding MGP_129S1SvImJ_T0077663.1 MGP_129S1SvImJ_G0030766.1 mouse_genomes_project 6 54311900 54315240 - Nod1 protein_coding processed_transcript MGP_129S1SvImJ_T0077664.1 MGP_129S1SvImJ_G0030766.1 mouse_genomes_project 6 54315230 54331939 - MGP_129S1SvImJ_P0077664 Nod1 protein_coding protein_coding MGP_129S1SvImJ_T0077665.1 MGP_129S1SvImJ_G0030766.1 mouse_genomes_project 6 54325839 54328337 - Nod1 protein_coding processed_transcript MGP_129S1SvImJ_T0077666.1 MGP_129S1SvImJ_G0030766.1 mouse_genomes_project 6 54337957 54357984 - MGP_129S1SvImJ_P0077666 Nod1 protein_coding protein_coding MGP_129S1SvImJ_T0015541.1 MGP_129S1SvImJ_G0013630.1 mouse_genomes_project 6 106449964 106450416 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076816.1 MGP_129S1SvImJ_G0030549.1 mouse_genomes_project 6 29455459 29500997 - MGP_129S1SvImJ_P0076816 Podxl protein_coding protein_coding MGP_129S1SvImJ_T0076817.1 MGP_129S1SvImJ_G0030549.1 mouse_genomes_project 6 29458959 29460279 - Podxl protein_coding processed_transcript MGP_129S1SvImJ_T0015421.1 MGP_129S1SvImJ_G0013510.1 mouse_genomes_project 6 66470241 66472156 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015620.1 MGP_129S1SvImJ_G0013709.1 mouse_genomes_project 6 130778041 130778488 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015281.1 MGP_129S1SvImJ_G0013370.1 mouse_genomes_project 6 13281957 13282231 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080532.1 MGP_129S1SvImJ_G0031394.1 mouse_genomes_project 6 137119391 137120356 + MGP_129S1SvImJ_P0080532 Tas2r129 protein_coding protein_coding MGP_129S1SvImJ_T0008776.1 MGP_129S1SvImJ_G0007091.1 mouse_genomes_project 6 148089897 148139577 + D6Ertd474e lincRNA lincRNA MGP_129S1SvImJ_T0008777.1 MGP_129S1SvImJ_G0007091.1 mouse_genomes_project 6 148089897 148093122 + D6Ertd474e lincRNA lincRNA MGP_129S1SvImJ_T0008778.1 MGP_129S1SvImJ_G0007091.1 mouse_genomes_project 6 148089902 148139942 + D6Ertd474e lincRNA lincRNA MGP_129S1SvImJ_T0008779.1 MGP_129S1SvImJ_G0007091.1 mouse_genomes_project 6 148089902 148141141 + D6Ertd474e lincRNA lincRNA MGP_129S1SvImJ_T0008780.1 MGP_129S1SvImJ_G0007091.1 mouse_genomes_project 6 148130121 148139906 + D6Ertd474e lincRNA lincRNA MGP_129S1SvImJ_T0101250.1 MGP_129S1SvImJ_G0039317.1 mouse_genomes_project 6 58743488 58743620 + Gm22367 snoRNA snoRNA MGP_129S1SvImJ_T0077172.1 MGP_129S1SvImJ_G0030637.1 mouse_genomes_project 6 40379822 40391307 + MGP_129S1SvImJ_P0077172 Sval2 protein_coding protein_coding MGP_129S1SvImJ_T0077173.1 MGP_129S1SvImJ_G0030637.1 mouse_genomes_project 6 40387132 40391266 + MGP_129S1SvImJ_P0077173 Sval2 protein_coding protein_coding MGP_129S1SvImJ_T0077174.1 MGP_129S1SvImJ_G0030637.1 mouse_genomes_project 6 40388685 40391266 + MGP_129S1SvImJ_P0077174 Sval2 protein_coding protein_coding MGP_129S1SvImJ_T0077175.1 MGP_129S1SvImJ_G0030637.1 mouse_genomes_project 6 40390233 40391183 + Sval2 protein_coding retained_intron MGP_129S1SvImJ_T0008628.1 MGP_129S1SvImJ_G0006976.1 mouse_genomes_project 6 60332657 60337069 + Gm35386 lincRNA lincRNA MGP_129S1SvImJ_T0078052.1 MGP_129S1SvImJ_G0030873.1 mouse_genomes_project 6 72908566 72910976 - Rnf181 protein_coding retained_intron MGP_129S1SvImJ_T0078053.1 MGP_129S1SvImJ_G0030873.1 mouse_genomes_project 6 72908566 72911285 - MGP_129S1SvImJ_P0078053 Rnf181 protein_coding protein_coding MGP_129S1SvImJ_T0078054.1 MGP_129S1SvImJ_G0030873.1 mouse_genomes_project 6 72908566 72911246 - MGP_129S1SvImJ_P0078054 Rnf181 protein_coding protein_coding MGP_129S1SvImJ_T0078055.1 MGP_129S1SvImJ_G0030873.1 mouse_genomes_project 6 72908724 72911213 - MGP_129S1SvImJ_P0078055 Rnf181 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078056.1 MGP_129S1SvImJ_G0030873.1 mouse_genomes_project 6 72908936 72910249 - MGP_129S1SvImJ_P0078056 Rnf181 protein_coding protein_coding MGP_129S1SvImJ_T0078057.1 MGP_129S1SvImJ_G0030873.1 mouse_genomes_project 6 72909097 72915809 - MGP_129S1SvImJ_P0078057 Rnf181 protein_coding protein_coding MGP_129S1SvImJ_T0078058.1 MGP_129S1SvImJ_G0030873.1 mouse_genomes_project 6 72909103 72911197 - MGP_129S1SvImJ_P0078058 Rnf181 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078059.1 MGP_129S1SvImJ_G0030873.1 mouse_genomes_project 6 72909129 72911243 - MGP_129S1SvImJ_P0078059 Rnf181 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078060.1 MGP_129S1SvImJ_G0030873.1 mouse_genomes_project 6 72909130 72911216 - MGP_129S1SvImJ_P0078060 Rnf181 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078061.1 MGP_129S1SvImJ_G0030873.1 mouse_genomes_project 6 72909140 72911235 - MGP_129S1SvImJ_P0078061 Rnf181 protein_coding protein_coding MGP_129S1SvImJ_T0078062.1 MGP_129S1SvImJ_G0030873.1 mouse_genomes_project 6 72909188 72911218 - MGP_129S1SvImJ_P0078062 Rnf181 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078063.1 MGP_129S1SvImJ_G0030873.1 mouse_genomes_project 6 72909270 72909920 - Rnf181 protein_coding retained_intron MGP_129S1SvImJ_T0078064.1 MGP_129S1SvImJ_G0030873.1 mouse_genomes_project 6 72909465 72911281 - Rnf181 protein_coding retained_intron MGP_129S1SvImJ_T0078065.1 MGP_129S1SvImJ_G0030873.1 mouse_genomes_project 6 72909865 72910848 - Rnf181 protein_coding retained_intron MGP_129S1SvImJ_T0101754.1 MGP_129S1SvImJ_G0039742.1 mouse_genomes_project 6 126025064 126028160 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101755.1 MGP_129S1SvImJ_G0039742.1 mouse_genomes_project 6 126025479 126025749 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101290.1 MGP_129S1SvImJ_G0039357.1 mouse_genomes_project 6 128596118 128596247 - Gm24175 snoRNA snoRNA MGP_129S1SvImJ_T0010816.1 MGP_129S1SvImJ_G0008932.1 mouse_genomes_project 6 116253346 116253404 + Mir7042 miRNA miRNA MGP_129S1SvImJ_T0005119.1 MGP_129S1SvImJ_G0004369.1 mouse_genomes_project 6 132603922 132627383 - Gm15987 antisense antisense MGP_129S1SvImJ_T0015623.1 MGP_129S1SvImJ_G0013712.1 mouse_genomes_project 6 131298680 131298906 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076124.1 MGP_129S1SvImJ_G0030419.1 mouse_genomes_project 6 89361 94386 - MGP_129S1SvImJ_P0076124 Samd9l protein_coding protein_coding MGP_129S1SvImJ_T0076125.1 MGP_129S1SvImJ_G0030419.1 mouse_genomes_project 6 94054 102090 - MGP_129S1SvImJ_P0076125 Samd9l protein_coding protein_coding MGP_129S1SvImJ_T0002699.1 MGP_129S1SvImJ_G0002581.1 mouse_genomes_project 6 39593704 39594222 + MGP_129S1SvImJ_P0002699 Trbv12-1 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0102640.1 MGP_129S1SvImJ_G0040473.1 mouse_genomes_project 6 127334119 127335023 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102636.1 MGP_129S1SvImJ_G0040469.1 mouse_genomes_project 6 91533413 91533585 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0008662.1 MGP_129S1SvImJ_G0007004.1 mouse_genomes_project 6 87255569 87260536 + 4930553P18Rik lincRNA lincRNA MGP_129S1SvImJ_T0004920.1 MGP_129S1SvImJ_G0004230.1 mouse_genomes_project 6 3735929 3782228 - Dlx6os1 antisense antisense MGP_129S1SvImJ_T0004921.1 MGP_129S1SvImJ_G0004230.1 mouse_genomes_project 6 3736283 3791804 - Dlx6os1 antisense antisense MGP_129S1SvImJ_T0101288.1 MGP_129S1SvImJ_G0039355.1 mouse_genomes_project 6 128018779 128019049 + Gm23547 snoRNA snoRNA MGP_129S1SvImJ_T0015543.1 MGP_129S1SvImJ_G0013632.1 mouse_genomes_project 6 107715577 107715885 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079183.1 MGP_129S1SvImJ_G0031100.1 mouse_genomes_project 6 110469517 110816686 + MGP_129S1SvImJ_P0079183 Itpr1 protein_coding protein_coding MGP_129S1SvImJ_T0079184.1 MGP_129S1SvImJ_G0031100.1 mouse_genomes_project 6 110469521 110816694 + MGP_129S1SvImJ_P0079184 Itpr1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0079185.1 MGP_129S1SvImJ_G0031100.1 mouse_genomes_project 6 110469623 110816686 + MGP_129S1SvImJ_P0079185 Itpr1 protein_coding protein_coding MGP_129S1SvImJ_T0079186.1 MGP_129S1SvImJ_G0031100.1 mouse_genomes_project 6 110513572 110648857 + Itpr1 protein_coding retained_intron MGP_129S1SvImJ_T0079187.1 MGP_129S1SvImJ_G0031100.1 mouse_genomes_project 6 110612534 110633954 + MGP_129S1SvImJ_P0079187 Itpr1 protein_coding protein_coding MGP_129S1SvImJ_T0079188.1 MGP_129S1SvImJ_G0031100.1 mouse_genomes_project 6 110671052 110674792 + Itpr1 protein_coding retained_intron MGP_129S1SvImJ_T0079189.1 MGP_129S1SvImJ_G0031100.1 mouse_genomes_project 6 110672586 110696798 + MGP_129S1SvImJ_P0079189 Itpr1 protein_coding protein_coding MGP_129S1SvImJ_T0079190.1 MGP_129S1SvImJ_G0031100.1 mouse_genomes_project 6 110672653 110734047 + MGP_129S1SvImJ_P0079190 Itpr1 protein_coding protein_coding MGP_129S1SvImJ_T0079191.1 MGP_129S1SvImJ_G0031100.1 mouse_genomes_project 6 110673667 110696753 + MGP_129S1SvImJ_P0079191 Itpr1 protein_coding protein_coding MGP_129S1SvImJ_T0079192.1 MGP_129S1SvImJ_G0031100.1 mouse_genomes_project 6 110717884 110731532 + Itpr1 protein_coding processed_transcript MGP_129S1SvImJ_T0079193.1 MGP_129S1SvImJ_G0031100.1 mouse_genomes_project 6 110767000 110771774 + Itpr1 protein_coding retained_intron MGP_129S1SvImJ_T0079194.1 MGP_129S1SvImJ_G0031100.1 mouse_genomes_project 6 110778562 110779465 + Itpr1 protein_coding retained_intron MGP_129S1SvImJ_T0015637.1 MGP_129S1SvImJ_G0013726.1 mouse_genomes_project 6 134332949 134333055 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001957.1 MGP_129S1SvImJ_G0001870.1 mouse_genomes_project 6 25916672 25920470 - TEC TEC MGP_129S1SvImJ_T0077130.1 MGP_129S1SvImJ_G0030615.1 mouse_genomes_project 6 39049160 39050156 - MGP_129S1SvImJ_P0077130 Tas2r138 protein_coding protein_coding MGP_129S1SvImJ_T0015362.1 MGP_129S1SvImJ_G0013451.1 mouse_genomes_project 6 48290336 48290901 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002121.1 MGP_129S1SvImJ_G0002034.1 mouse_genomes_project 6 102287235 102288342 - TEC TEC MGP_129S1SvImJ_T0010834.1 MGP_129S1SvImJ_G0008950.1 mouse_genomes_project 6 132627193 132627249 - Mir7649 miRNA miRNA MGP_129S1SvImJ_T0000047.1 MGP_129S1SvImJ_G0000039.1 mouse_genomes_project 6 71137365 71137401 + Igkj3 IG_J_gene processed_transcript MGP_129S1SvImJ_T0000048.1 MGP_129S1SvImJ_G0000039.1 mouse_genomes_project 6 71137365 71137403 + MGP_129S1SvImJ_P0000048 Igkj3 IG_J_gene IG_J_gene MGP_129S1SvImJ_T0015472.1 MGP_129S1SvImJ_G0013561.1 mouse_genomes_project 6 79292859 79293831 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018353.1 MGP_129S1SvImJ_G0015652.1 mouse_genomes_project 6 147629016 147648276 + Gm7457 processed_transcript antisense MGP_129S1SvImJ_T0018354.1 MGP_129S1SvImJ_G0015652.1 mouse_genomes_project 6 147629170 147631745 + Gm7457 processed_transcript retained_intron MGP_129S1SvImJ_T0079809.1 MGP_129S1SvImJ_G0031209.1 mouse_genomes_project 6 123710946 123718914 - Atp6v1e1 protein_coding retained_intron MGP_129S1SvImJ_T0079810.1 MGP_129S1SvImJ_G0031209.1 mouse_genomes_project 6 123711877 123734330 - MGP_129S1SvImJ_P0079810 Atp6v1e1 protein_coding protein_coding MGP_129S1SvImJ_T0079811.1 MGP_129S1SvImJ_G0031209.1 mouse_genomes_project 6 123711887 123729942 - MGP_129S1SvImJ_P0079811 Atp6v1e1 protein_coding protein_coding MGP_129S1SvImJ_T0079812.1 MGP_129S1SvImJ_G0031209.1 mouse_genomes_project 6 123720241 123734222 - Atp6v1e1 protein_coding retained_intron MGP_129S1SvImJ_T0079813.1 MGP_129S1SvImJ_G0031209.1 mouse_genomes_project 6 123720579 123734229 - MGP_129S1SvImJ_P0079813 Atp6v1e1 protein_coding protein_coding MGP_129S1SvImJ_T0079814.1 MGP_129S1SvImJ_G0031209.1 mouse_genomes_project 6 123723995 123734076 - MGP_129S1SvImJ_P0079814 Atp6v1e1 protein_coding protein_coding MGP_129S1SvImJ_T0101286.1 MGP_129S1SvImJ_G0039353.1 mouse_genomes_project 6 127404136 127404246 + Gm23554 snoRNA snoRNA MGP_129S1SvImJ_T0001960.1 MGP_129S1SvImJ_G0001873.1 mouse_genomes_project 6 26296967 26298839 + TEC TEC MGP_129S1SvImJ_T0005129.1 MGP_129S1SvImJ_G0004379.1 mouse_genomes_project 6 140555578 140558140 + Gm26653 antisense antisense MGP_129S1SvImJ_T0015634.1 MGP_129S1SvImJ_G0013723.1 mouse_genomes_project 6 133360924 133361508 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076162.1 MGP_129S1SvImJ_G0030428.1 mouse_genomes_project 6 1360648 1407466 + MGP_129S1SvImJ_P0076162 Casd1 protein_coding protein_coding MGP_129S1SvImJ_T0076163.1 MGP_129S1SvImJ_G0030428.1 mouse_genomes_project 6 1360758 1388100 + MGP_129S1SvImJ_P0076163 Casd1 protein_coding protein_coding MGP_129S1SvImJ_T0076164.1 MGP_129S1SvImJ_G0030428.1 mouse_genomes_project 6 1395248 1405093 + MGP_129S1SvImJ_P0076164 Casd1 protein_coding protein_coding MGP_129S1SvImJ_T0080753.1 MGP_129S1SvImJ_G0031443.1 mouse_genomes_project 6 144168408 144177903 - MGP_129S1SvImJ_P0080753 Rergl protein_coding protein_coding MGP_129S1SvImJ_T0018338.1 MGP_129S1SvImJ_G0015646.1 mouse_genomes_project 6 123987466 123992922 + Gm4651 processed_transcript antisense MGP_129S1SvImJ_T0018339.1 MGP_129S1SvImJ_G0015646.1 mouse_genomes_project 6 123987598 123989090 + Gm4651 processed_transcript retained_intron MGP_129S1SvImJ_T0076726.1 MGP_129S1SvImJ_G0030535.1 mouse_genomes_project 6 28243804 28270362 - MGP_129S1SvImJ_P0076726 Zc3hc1 protein_coding protein_coding MGP_129S1SvImJ_T0076727.1 MGP_129S1SvImJ_G0030535.1 mouse_genomes_project 6 28243808 28270341 - MGP_129S1SvImJ_P0076727 Zc3hc1 protein_coding protein_coding MGP_129S1SvImJ_T0076728.1 MGP_129S1SvImJ_G0030535.1 mouse_genomes_project 6 28243812 28244643 - Zc3hc1 protein_coding retained_intron MGP_129S1SvImJ_T0076729.1 MGP_129S1SvImJ_G0030535.1 mouse_genomes_project 6 28243812 28270367 - MGP_129S1SvImJ_P0076729 Zc3hc1 protein_coding protein_coding MGP_129S1SvImJ_T0076730.1 MGP_129S1SvImJ_G0030535.1 mouse_genomes_project 6 28243898 28270349 - MGP_129S1SvImJ_P0076730 Zc3hc1 protein_coding protein_coding MGP_129S1SvImJ_T0076731.1 MGP_129S1SvImJ_G0030535.1 mouse_genomes_project 6 28247692 28250405 - Zc3hc1 protein_coding retained_intron MGP_129S1SvImJ_T0076732.1 MGP_129S1SvImJ_G0030535.1 mouse_genomes_project 6 28250346 28270345 - MGP_129S1SvImJ_P0076732 Zc3hc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076733.1 MGP_129S1SvImJ_G0030535.1 mouse_genomes_project 6 28252247 28260089 - Zc3hc1 protein_coding processed_transcript MGP_129S1SvImJ_T0076734.1 MGP_129S1SvImJ_G0030535.1 mouse_genomes_project 6 28253427 28270328 - MGP_129S1SvImJ_P0076734 Zc3hc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076735.1 MGP_129S1SvImJ_G0030535.1 mouse_genomes_project 6 28262206 28270349 - Zc3hc1 protein_coding retained_intron MGP_129S1SvImJ_T0076736.1 MGP_129S1SvImJ_G0030535.1 mouse_genomes_project 6 28264732 28270353 - Zc3hc1 protein_coding retained_intron MGP_129S1SvImJ_T0080480.1 MGP_129S1SvImJ_G0031360.1 mouse_genomes_project 6 133444804 133461616 - MGP_129S1SvImJ_P0080480 Gm156 protein_coding protein_coding MGP_129S1SvImJ_T0080481.1 MGP_129S1SvImJ_G0031360.1 mouse_genomes_project 6 133445755 133453457 - MGP_129S1SvImJ_P0080481 Gm156 protein_coding protein_coding MGP_129S1SvImJ_T0005143.1 MGP_129S1SvImJ_G0004390.1 mouse_genomes_project 6 149672818 149674161 + Sox5os5 antisense antisense MGP_129S1SvImJ_T0080446.1 MGP_129S1SvImJ_G0031349.1 mouse_genomes_project 6 133152887 133175704 - MGP_129S1SvImJ_P0080446 Olr1 protein_coding protein_coding MGP_129S1SvImJ_T0080447.1 MGP_129S1SvImJ_G0031349.1 mouse_genomes_project 6 133155309 133175646 - MGP_129S1SvImJ_P0080447 Olr1 protein_coding protein_coding MGP_129S1SvImJ_T0080448.1 MGP_129S1SvImJ_G0031349.1 mouse_genomes_project 6 133155309 133175646 - MGP_129S1SvImJ_P0080448 Olr1 protein_coding protein_coding MGP_129S1SvImJ_T0080449.1 MGP_129S1SvImJ_G0031349.1 mouse_genomes_project 6 133155348 133165408 - MGP_129S1SvImJ_P0080449 Olr1 protein_coding protein_coding MGP_129S1SvImJ_T0080450.1 MGP_129S1SvImJ_G0031349.1 mouse_genomes_project 6 133168441 133175704 - MGP_129S1SvImJ_P0080450 Olr1 protein_coding protein_coding MGP_129S1SvImJ_T0000166.1 MGP_129S1SvImJ_G0000128.1 mouse_genomes_project 6 68726644 68727110 + MGP_129S1SvImJ_P0000166 Igkv14-100 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000167.1 MGP_129S1SvImJ_G0000128.1 mouse_genomes_project 6 68726644 68727110 + MGP_129S1SvImJ_P0000167 Igkv14-100 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0080520.1 MGP_129S1SvImJ_G0031382.1 mouse_genomes_project 6 136805167 136806085 - MGP_129S1SvImJ_P0080520 Tas2r121 protein_coding protein_coding MGP_129S1SvImJ_T0002029.1 MGP_129S1SvImJ_G0001942.1 mouse_genomes_project 6 72306069 72307333 + TEC TEC MGP_129S1SvImJ_T0101266.1 MGP_129S1SvImJ_G0039333.1 mouse_genomes_project 6 95033329 95033460 - Gm25094 snoRNA snoRNA MGP_129S1SvImJ_T0098992.1 MGP_129S1SvImJ_G0037066.1 mouse_genomes_project 6 131948638 131950005 - Gm44190 sense_intronic sense_intronic MGP_129S1SvImJ_T0015358.1 MGP_129S1SvImJ_G0013447.1 mouse_genomes_project 6 47977939 47980369 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076255.1 MGP_129S1SvImJ_G0030449.1 mouse_genomes_project 6 5177002 5394344 + MGP_129S1SvImJ_P0076255 Umad1 protein_coding protein_coding MGP_129S1SvImJ_T0076256.1 MGP_129S1SvImJ_G0030449.1 mouse_genomes_project 6 5177064 5359812 + MGP_129S1SvImJ_P0076256 Umad1 protein_coding protein_coding MGP_129S1SvImJ_T0076257.1 MGP_129S1SvImJ_G0030449.1 mouse_genomes_project 6 5177096 5361438 + MGP_129S1SvImJ_P0076257 Umad1 protein_coding protein_coding MGP_129S1SvImJ_T0076258.1 MGP_129S1SvImJ_G0030449.1 mouse_genomes_project 6 5177142 5359953 + MGP_129S1SvImJ_P0076258 Umad1 protein_coding protein_coding MGP_129S1SvImJ_T0076259.1 MGP_129S1SvImJ_G0030449.1 mouse_genomes_project 6 5177144 5361434 + MGP_129S1SvImJ_P0076259 Umad1 protein_coding protein_coding MGP_129S1SvImJ_T0076260.1 MGP_129S1SvImJ_G0030449.1 mouse_genomes_project 6 5177158 5199360 + Umad1 protein_coding processed_transcript MGP_129S1SvImJ_T0076262.1 MGP_129S1SvImJ_G0030449.1 mouse_genomes_project 6 5190194 5361441 + MGP_129S1SvImJ_P0076262 Umad1 protein_coding protein_coding MGP_129S1SvImJ_T0076263.1 MGP_129S1SvImJ_G0030449.1 mouse_genomes_project 6 5352357 5360912 + Umad1 protein_coding processed_transcript MGP_129S1SvImJ_T0080509.1 MGP_129S1SvImJ_G0031373.1 mouse_genomes_project 6 135637318 135638245 - MGP_129S1SvImJ_P0080509 Tas2r106 protein_coding protein_coding MGP_129S1SvImJ_T0015500.1 MGP_129S1SvImJ_G0013589.1 mouse_genomes_project 6 87176970 87177668 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002100.1 MGP_129S1SvImJ_G0002013.1 mouse_genomes_project 6 92045593 92046106 + TEC TEC MGP_129S1SvImJ_T0001977.1 MGP_129S1SvImJ_G0001890.1 mouse_genomes_project 6 38674753 38677580 + TEC TEC MGP_129S1SvImJ_T0079942.1 MGP_129S1SvImJ_G0031236.1 mouse_genomes_project 6 126043000 126055827 + MGP_129S1SvImJ_P0079942 Clec4a1 protein_coding protein_coding MGP_129S1SvImJ_T0102662.1 MGP_129S1SvImJ_G0040495.1 mouse_genomes_project 6 137578095 137579731 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0079046.1 MGP_129S1SvImJ_G0031074.1 mouse_genomes_project 6 99013639 99035544 - MGP_129S1SvImJ_P0079046 Uba3 protein_coding protein_coding MGP_129S1SvImJ_T0079047.1 MGP_129S1SvImJ_G0031074.1 mouse_genomes_project 6 99013787 99035543 - MGP_129S1SvImJ_P0079047 Uba3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079048.1 MGP_129S1SvImJ_G0031074.1 mouse_genomes_project 6 99013976 99035631 - MGP_129S1SvImJ_P0079048 Uba3 protein_coding protein_coding MGP_129S1SvImJ_T0079049.1 MGP_129S1SvImJ_G0031074.1 mouse_genomes_project 6 99025272 99027452 - Uba3 protein_coding retained_intron MGP_129S1SvImJ_T0079050.1 MGP_129S1SvImJ_G0031074.1 mouse_genomes_project 6 99032997 99035549 - Uba3 protein_coding retained_intron MGP_129S1SvImJ_T0079051.1 MGP_129S1SvImJ_G0031074.1 mouse_genomes_project 6 99034074 99035552 - Uba3 protein_coding retained_intron MGP_129S1SvImJ_T0018334.1 MGP_129S1SvImJ_G0015644.1 mouse_genomes_project 6 110931274 110934889 + Gm17055 processed_transcript lincRNA MGP_129S1SvImJ_T0018335.1 MGP_129S1SvImJ_G0015644.1 mouse_genomes_project 6 110931402 110935009 + Gm17055 processed_transcript retained_intron MGP_129S1SvImJ_T0015409.1 MGP_129S1SvImJ_G0013498.1 mouse_genomes_project 6 65194569 65194983 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102598.1 MGP_129S1SvImJ_G0040431.1 mouse_genomes_project 6 39911758 39912111 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099048.1 MGP_129S1SvImJ_G0037116.1 mouse_genomes_project 6 39556710 39568481 + Gm37610 sense_overlapping sense_overlapping MGP_129S1SvImJ_T0100002.1 MGP_129S1SvImJ_G0038069.1 mouse_genomes_project 6 65806444 65806550 - Gm23543 snRNA snRNA MGP_129S1SvImJ_T0015273.1 MGP_129S1SvImJ_G0013362.1 mouse_genomes_project 6 9595206 9596908 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005051.1 MGP_129S1SvImJ_G0004318.1 mouse_genomes_project 6 90256766 90261183 + Gm15612 antisense antisense MGP_129S1SvImJ_T0079136.1 MGP_129S1SvImJ_G0031091.1 mouse_genomes_project 6 105620292 105868166 + MGP_129S1SvImJ_P0079136 Chl1 protein_coding protein_coding MGP_129S1SvImJ_T0079137.1 MGP_129S1SvImJ_G0031091.1 mouse_genomes_project 6 105620668 105753716 + Chl1 protein_coding retained_intron MGP_129S1SvImJ_T0079138.1 MGP_129S1SvImJ_G0031091.1 mouse_genomes_project 6 105620774 105845516 + MGP_129S1SvImJ_P0079138 Chl1 protein_coding protein_coding MGP_129S1SvImJ_T0079139.1 MGP_129S1SvImJ_G0031091.1 mouse_genomes_project 6 105620880 105841944 + MGP_129S1SvImJ_P0079139 Chl1 protein_coding protein_coding MGP_129S1SvImJ_T0079140.1 MGP_129S1SvImJ_G0031091.1 mouse_genomes_project 6 105621036 105781322 + MGP_129S1SvImJ_P0079140 Chl1 protein_coding protein_coding MGP_129S1SvImJ_T0079141.1 MGP_129S1SvImJ_G0031091.1 mouse_genomes_project 6 105815485 105842302 + MGP_129S1SvImJ_P0079141 Chl1 protein_coding protein_coding MGP_129S1SvImJ_T0077436.1 MGP_129S1SvImJ_G0030714.1 mouse_genomes_project 6 47810403 47811815 + MGP_129S1SvImJ_P0077436 Tmem176a protein_coding protein_coding MGP_129S1SvImJ_T0077437.1 MGP_129S1SvImJ_G0030714.1 mouse_genomes_project 6 47810996 47815354 + MGP_129S1SvImJ_P0077437 Tmem176a protein_coding protein_coding MGP_129S1SvImJ_T0077438.1 MGP_129S1SvImJ_G0030714.1 mouse_genomes_project 6 47811006 47817834 + MGP_129S1SvImJ_P0077438 Tmem176a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077439.1 MGP_129S1SvImJ_G0030714.1 mouse_genomes_project 6 47811032 47814846 + Tmem176a protein_coding retained_intron MGP_129S1SvImJ_T0077440.1 MGP_129S1SvImJ_G0030714.1 mouse_genomes_project 6 47811067 47814850 + MGP_129S1SvImJ_P0077440 Tmem176a protein_coding protein_coding MGP_129S1SvImJ_T0077441.1 MGP_129S1SvImJ_G0030714.1 mouse_genomes_project 6 47811254 47814260 + MGP_129S1SvImJ_P0077441 Tmem176a protein_coding protein_coding MGP_129S1SvImJ_T0077442.1 MGP_129S1SvImJ_G0030714.1 mouse_genomes_project 6 47812073 47813077 + MGP_129S1SvImJ_P0077442 Tmem176a protein_coding protein_coding MGP_129S1SvImJ_T0077937.1 MGP_129S1SvImJ_G0030849.1 mouse_genomes_project 6 71280117 71345472 + MGP_129S1SvImJ_P0077937 Eif2ak3 protein_coding protein_coding MGP_129S1SvImJ_T0077938.1 MGP_129S1SvImJ_G0030849.1 mouse_genomes_project 6 71280155 71301999 + MGP_129S1SvImJ_P0077938 Eif2ak3 protein_coding protein_coding MGP_129S1SvImJ_T0077939.1 MGP_129S1SvImJ_G0030849.1 mouse_genomes_project 6 71280158 71281222 + Eif2ak3 protein_coding retained_intron MGP_129S1SvImJ_T0077940.1 MGP_129S1SvImJ_G0030849.1 mouse_genomes_project 6 71315697 71330282 + Eif2ak3 protein_coding retained_intron MGP_129S1SvImJ_T0077941.1 MGP_129S1SvImJ_G0030849.1 mouse_genomes_project 6 71333609 71337104 + Eif2ak3 protein_coding retained_intron MGP_129S1SvImJ_T0102610.1 MGP_129S1SvImJ_G0040443.1 mouse_genomes_project 6 56789079 56789437 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0000348.1 MGP_129S1SvImJ_G0000290.1 mouse_genomes_project 6 70929193 70993118 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0080590.1 MGP_129S1SvImJ_G0031410.1 mouse_genomes_project 6 139221069 139226987 + MGP_129S1SvImJ_P0080590 Cdkn1b protein_coding protein_coding MGP_129S1SvImJ_T0080591.1 MGP_129S1SvImJ_G0031410.1 mouse_genomes_project 6 139221069 139226987 + MGP_129S1SvImJ_P0080591 Cdkn1b protein_coding protein_coding MGP_129S1SvImJ_T0080592.1 MGP_129S1SvImJ_G0031410.1 mouse_genomes_project 6 139221182 139226016 + MGP_129S1SvImJ_P0080592 Cdkn1b protein_coding protein_coding MGP_129S1SvImJ_T0008709.1 MGP_129S1SvImJ_G0007039.1 mouse_genomes_project 6 109418835 109512019 - Gm44398 lincRNA lincRNA MGP_129S1SvImJ_T0079214.1 MGP_129S1SvImJ_G0031107.1 mouse_genomes_project 6 114904347 114917602 + MGP_129S1SvImJ_P0079214 Cav3 protein_coding protein_coding MGP_129S1SvImJ_T0076927.1 MGP_129S1SvImJ_G0030568.1 mouse_genomes_project 6 33144424 33147224 - Cnot4 protein_coding retained_intron MGP_129S1SvImJ_T0076928.1 MGP_129S1SvImJ_G0030568.1 mouse_genomes_project 6 33144424 33261999 - MGP_129S1SvImJ_P0076928 Cnot4 protein_coding protein_coding MGP_129S1SvImJ_T0076929.1 MGP_129S1SvImJ_G0030568.1 mouse_genomes_project 6 33144425 33262068 - MGP_129S1SvImJ_P0076929 Cnot4 protein_coding protein_coding MGP_129S1SvImJ_T0076930.1 MGP_129S1SvImJ_G0030568.1 mouse_genomes_project 6 33144430 33262063 - MGP_129S1SvImJ_P0076930 Cnot4 protein_coding protein_coding MGP_129S1SvImJ_T0076931.1 MGP_129S1SvImJ_G0030568.1 mouse_genomes_project 6 33168796 33262089 - MGP_129S1SvImJ_P0076931 Cnot4 protein_coding protein_coding MGP_129S1SvImJ_T0076932.1 MGP_129S1SvImJ_G0030568.1 mouse_genomes_project 6 33170099 33211275 - MGP_129S1SvImJ_P0076932 Cnot4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0076933.1 MGP_129S1SvImJ_G0030568.1 mouse_genomes_project 6 33177985 33181926 - Cnot4 protein_coding retained_intron MGP_129S1SvImJ_T0076934.1 MGP_129S1SvImJ_G0030568.1 mouse_genomes_project 6 33178416 33262061 - Cnot4 protein_coding processed_transcript MGP_129S1SvImJ_T0079368.1 MGP_129S1SvImJ_G0031132.1 mouse_genomes_project 6 116141086 116153259 + MGP_129S1SvImJ_P0079368 Brk1 protein_coding protein_coding MGP_129S1SvImJ_T0005137.1 MGP_129S1SvImJ_G0004385.1 mouse_genomes_project 6 148044866 148065484 - 1700126G02Rik antisense antisense MGP_129S1SvImJ_T0015552.1 MGP_129S1SvImJ_G0013641.1 mouse_genomes_project 6 111749539 111750164 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080195.1 MGP_129S1SvImJ_G0031289.1 mouse_genomes_project 6 128500803 128502081 - Ncapd2 protein_coding retained_intron MGP_129S1SvImJ_T0080196.1 MGP_129S1SvImJ_G0031289.1 mouse_genomes_project 6 128500803 128526469 - MGP_129S1SvImJ_P0080196 Ncapd2 protein_coding protein_coding MGP_129S1SvImJ_T0080197.1 MGP_129S1SvImJ_G0031289.1 mouse_genomes_project 6 128502635 128503887 - Ncapd2 protein_coding retained_intron MGP_129S1SvImJ_T0080198.1 MGP_129S1SvImJ_G0031289.1 mouse_genomes_project 6 128503737 128504603 - Ncapd2 protein_coding retained_intron MGP_129S1SvImJ_T0080199.1 MGP_129S1SvImJ_G0031289.1 mouse_genomes_project 6 128503848 128506706 - Ncapd2 protein_coding retained_intron MGP_129S1SvImJ_T0080200.1 MGP_129S1SvImJ_G0031289.1 mouse_genomes_project 6 128504628 128506688 - Ncapd2 protein_coding retained_intron MGP_129S1SvImJ_T0080201.1 MGP_129S1SvImJ_G0031289.1 mouse_genomes_project 6 128506156 128507326 - Ncapd2 protein_coding retained_intron MGP_129S1SvImJ_T0080202.1 MGP_129S1SvImJ_G0031289.1 mouse_genomes_project 6 128506251 128509700 - Ncapd2 protein_coding retained_intron MGP_129S1SvImJ_T0080203.1 MGP_129S1SvImJ_G0031289.1 mouse_genomes_project 6 128508617 128510352 - Ncapd2 protein_coding retained_intron MGP_129S1SvImJ_T0080204.1 MGP_129S1SvImJ_G0031289.1 mouse_genomes_project 6 128510175 128512374 - Ncapd2 protein_coding retained_intron MGP_129S1SvImJ_T0080205.1 MGP_129S1SvImJ_G0031289.1 mouse_genomes_project 6 128516989 128526371 - MGP_129S1SvImJ_P0080205 Ncapd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080206.1 MGP_129S1SvImJ_G0031289.1 mouse_genomes_project 6 128517213 128519289 - Ncapd2 protein_coding retained_intron MGP_129S1SvImJ_T0080207.1 MGP_129S1SvImJ_G0031289.1 mouse_genomes_project 6 128518486 128526258 - MGP_129S1SvImJ_P0080207 Ncapd2 protein_coding protein_coding MGP_129S1SvImJ_T0101955.1 MGP_129S1SvImJ_G0039839.1 mouse_genomes_project 6 133993861 134005024 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0079052.1 MGP_129S1SvImJ_G0031075.1 mouse_genomes_project 6 99040664 99064392 + MGP_129S1SvImJ_P0079052 Arl6ip5 protein_coding protein_coding MGP_129S1SvImJ_T0077197.1 MGP_129S1SvImJ_G0030646.1 mouse_genomes_project 6 40794282 40823373 + MGP_129S1SvImJ_P0077197 Clcn1 protein_coding protein_coding MGP_129S1SvImJ_T0077198.1 MGP_129S1SvImJ_G0030646.1 mouse_genomes_project 6 40794364 40822895 + MGP_129S1SvImJ_P0077198 Clcn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077199.1 MGP_129S1SvImJ_G0030646.1 mouse_genomes_project 6 40794453 40822946 + MGP_129S1SvImJ_P0077199 Clcn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077200.1 MGP_129S1SvImJ_G0030646.1 mouse_genomes_project 6 40794453 40822895 + MGP_129S1SvImJ_P0077200 Clcn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077201.1 MGP_129S1SvImJ_G0030646.1 mouse_genomes_project 6 40794453 40822895 + MGP_129S1SvImJ_P0077201 Clcn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077202.1 MGP_129S1SvImJ_G0030646.1 mouse_genomes_project 6 40794453 40822895 + MGP_129S1SvImJ_P0077202 Clcn1 protein_coding protein_coding MGP_129S1SvImJ_T0077203.1 MGP_129S1SvImJ_G0030646.1 mouse_genomes_project 6 40794463 40822674 + MGP_129S1SvImJ_P0077203 Clcn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077204.1 MGP_129S1SvImJ_G0030646.1 mouse_genomes_project 6 40806497 40824473 + Clcn1 protein_coding processed_transcript MGP_129S1SvImJ_T0077205.1 MGP_129S1SvImJ_G0030646.1 mouse_genomes_project 6 40818861 40821781 + MGP_129S1SvImJ_P0077205 Clcn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077206.1 MGP_129S1SvImJ_G0030646.1 mouse_genomes_project 6 40821208 40822061 + Clcn1 protein_coding retained_intron MGP_129S1SvImJ_T0079358.1 MGP_129S1SvImJ_G0031130.1 mouse_genomes_project 6 116054161 116133544 + MGP_129S1SvImJ_P0079358 Fancd2 protein_coding protein_coding MGP_129S1SvImJ_T0079359.1 MGP_129S1SvImJ_G0031130.1 mouse_genomes_project 6 116054183 116061567 + Fancd2 protein_coding retained_intron MGP_129S1SvImJ_T0079360.1 MGP_129S1SvImJ_G0031130.1 mouse_genomes_project 6 116054183 116062450 + Fancd2 protein_coding retained_intron MGP_129S1SvImJ_T0079361.1 MGP_129S1SvImJ_G0031130.1 mouse_genomes_project 6 116054183 116132800 + MGP_129S1SvImJ_P0079361 Fancd2 protein_coding protein_coding MGP_129S1SvImJ_T0079362.1 MGP_129S1SvImJ_G0031130.1 mouse_genomes_project 6 116080259 116082426 + Fancd2 protein_coding retained_intron MGP_129S1SvImJ_T0079363.1 MGP_129S1SvImJ_G0031130.1 mouse_genomes_project 6 116080263 116095427 + MGP_129S1SvImJ_P0079363 Fancd2 protein_coding protein_coding MGP_129S1SvImJ_T0079364.1 MGP_129S1SvImJ_G0031130.1 mouse_genomes_project 6 116101636 116109057 + MGP_129S1SvImJ_P0079364 Fancd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079365.1 MGP_129S1SvImJ_G0031130.1 mouse_genomes_project 6 116117484 116122346 + Fancd2 protein_coding retained_intron MGP_129S1SvImJ_T0077187.1 MGP_129S1SvImJ_G0030645.1 mouse_genomes_project 6 40772568 40790095 + MGP_129S1SvImJ_P0077187 Casp2 protein_coding protein_coding MGP_129S1SvImJ_T0077188.1 MGP_129S1SvImJ_G0030645.1 mouse_genomes_project 6 40772639 40776711 + Casp2 protein_coding retained_intron MGP_129S1SvImJ_T0077189.1 MGP_129S1SvImJ_G0030645.1 mouse_genomes_project 6 40772703 40788079 + MGP_129S1SvImJ_P0077189 Casp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077190.1 MGP_129S1SvImJ_G0030645.1 mouse_genomes_project 6 40774974 40775614 + Casp2 protein_coding processed_transcript MGP_129S1SvImJ_T0077191.1 MGP_129S1SvImJ_G0030645.1 mouse_genomes_project 6 40775593 40777196 + Casp2 protein_coding retained_intron MGP_129S1SvImJ_T0077192.1 MGP_129S1SvImJ_G0030645.1 mouse_genomes_project 6 40776873 40787484 + Casp2 protein_coding processed_transcript MGP_129S1SvImJ_T0077193.1 MGP_129S1SvImJ_G0030645.1 mouse_genomes_project 6 40784073 40788120 + Casp2 protein_coding retained_intron MGP_129S1SvImJ_T0077194.1 MGP_129S1SvImJ_G0030645.1 mouse_genomes_project 6 40787223 40788077 + Casp2 protein_coding processed_transcript MGP_129S1SvImJ_T0077195.1 MGP_129S1SvImJ_G0030645.1 mouse_genomes_project 6 40787367 40788228 + Casp2 protein_coding processed_transcript MGP_129S1SvImJ_T0077196.1 MGP_129S1SvImJ_G0030645.1 mouse_genomes_project 6 40787393 40788354 + Casp2 protein_coding processed_transcript MGP_129S1SvImJ_T0004986.1 MGP_129S1SvImJ_G0004278.1 mouse_genomes_project 6 54696709 54708301 - Gm44073 antisense antisense MGP_129S1SvImJ_T0079819.1 MGP_129S1SvImJ_G0031211.1 mouse_genomes_project 6 123810255 123837860 - MGP_129S1SvImJ_P0079819 Bid protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079820.1 MGP_129S1SvImJ_G0031211.1 mouse_genomes_project 6 123811179 123837877 - MGP_129S1SvImJ_P0079820 Bid protein_coding protein_coding MGP_129S1SvImJ_T0079821.1 MGP_129S1SvImJ_G0031211.1 mouse_genomes_project 6 123813941 123815892 - Bid protein_coding retained_intron MGP_129S1SvImJ_T0079822.1 MGP_129S1SvImJ_G0031211.1 mouse_genomes_project 6 123818546 123837822 - MGP_129S1SvImJ_P0079822 Bid protein_coding protein_coding MGP_129S1SvImJ_T0079823.1 MGP_129S1SvImJ_G0031211.1 mouse_genomes_project 6 123825348 123837827 - Bid protein_coding processed_transcript MGP_129S1SvImJ_T0078993.1 MGP_129S1SvImJ_G0031062.1 mouse_genomes_project 6 94544207 94559299 + MGP_129S1SvImJ_P0078993 Gm15737 protein_coding protein_coding MGP_129S1SvImJ_T0015596.1 MGP_129S1SvImJ_G0013685.1 mouse_genomes_project 6 125371599 125371979 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076261.1 MGP_129S1SvImJ_G0030450.1 mouse_genomes_project 6 5177164 5528285 + MGP_129S1SvImJ_P0076261 Gm45062 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0002021.1 MGP_129S1SvImJ_G0001934.1 mouse_genomes_project 6 61761307 61763339 + TEC TEC MGP_129S1SvImJ_T0015317.1 MGP_129S1SvImJ_G0013406.1 mouse_genomes_project 6 34739605 34739810 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015286.1 MGP_129S1SvImJ_G0013375.1 mouse_genomes_project 6 15427780 15428787 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008712.1 MGP_129S1SvImJ_G0007042.1 mouse_genomes_project 6 115156681 115164512 + Gm26799 lincRNA lincRNA MGP_129S1SvImJ_T0002032.1 MGP_129S1SvImJ_G0001945.1 mouse_genomes_project 6 72992413 72993973 + TEC TEC MGP_129S1SvImJ_T0076995.1 MGP_129S1SvImJ_G0030585.1 mouse_genomes_project 6 36685286 36739523 + MGP_129S1SvImJ_P0076995 Ttc26 protein_coding protein_coding MGP_129S1SvImJ_T0076996.1 MGP_129S1SvImJ_G0030585.1 mouse_genomes_project 6 36685342 36700370 + MGP_129S1SvImJ_P0076996 Ttc26 protein_coding protein_coding MGP_129S1SvImJ_T0076997.1 MGP_129S1SvImJ_G0030585.1 mouse_genomes_project 6 36685342 36739523 + MGP_129S1SvImJ_P0076997 Ttc26 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076998.1 MGP_129S1SvImJ_G0030585.1 mouse_genomes_project 6 36685346 36703552 + MGP_129S1SvImJ_P0076998 Ttc26 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076999.1 MGP_129S1SvImJ_G0030585.1 mouse_genomes_project 6 36696750 36700708 + Ttc26 protein_coding retained_intron MGP_129S1SvImJ_T0080830.1 MGP_129S1SvImJ_G0031459.1 mouse_genomes_project 6 147023021 147065992 - MGP_129S1SvImJ_P0080830 Slco1a5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080831.1 MGP_129S1SvImJ_G0031459.1 mouse_genomes_project 6 147023021 147111314 - MGP_129S1SvImJ_P0080831 Slco1a5 protein_coding protein_coding MGP_129S1SvImJ_T0080832.1 MGP_129S1SvImJ_G0031459.1 mouse_genomes_project 6 147023021 147069268 - MGP_129S1SvImJ_P0080832 Slco1a5 protein_coding protein_coding MGP_129S1SvImJ_T0080833.1 MGP_129S1SvImJ_G0031459.1 mouse_genomes_project 6 147039015 147069268 - Slco1a5 protein_coding retained_intron MGP_129S1SvImJ_T0080834.1 MGP_129S1SvImJ_G0031459.1 mouse_genomes_project 6 147047482 147111281 - MGP_129S1SvImJ_P0080834 Slco1a5 protein_coding protein_coding MGP_129S1SvImJ_T0079473.1 MGP_129S1SvImJ_G0031150.1 mouse_genomes_project 6 118209903 118218839 - MGP_129S1SvImJ_P0079473 Mkrn2os protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079474.1 MGP_129S1SvImJ_G0031150.1 mouse_genomes_project 6 118211481 118218866 - MGP_129S1SvImJ_P0079474 Mkrn2os protein_coding protein_coding MGP_129S1SvImJ_T0004960.1 MGP_129S1SvImJ_G0004260.1 mouse_genomes_project 6 38650062 38656012 - Gm26807 antisense antisense MGP_129S1SvImJ_T0000152.1 MGP_129S1SvImJ_G0000116.1 mouse_genomes_project 6 68050513 68050800 - MGP_129S1SvImJ_P0000152 Igkv9-124 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000153.1 MGP_129S1SvImJ_G0000116.1 mouse_genomes_project 6 68050513 68050980 - MGP_129S1SvImJ_P0000153 Igkv9-124 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0015251.1 MGP_129S1SvImJ_G0013340.1 mouse_genomes_project 6 1108723 1109330 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077896.1 MGP_129S1SvImJ_G0030839.1 mouse_genomes_project 6 66719847 66769067 - MGP_129S1SvImJ_P0077896 protein_coding protein_coding MGP_129S1SvImJ_T0076962.1 MGP_129S1SvImJ_G0030577.1 mouse_genomes_project 6 35758846 35798530 + MGP_129S1SvImJ_P0076962 Akr1d1 protein_coding protein_coding MGP_129S1SvImJ_T0076963.1 MGP_129S1SvImJ_G0030577.1 mouse_genomes_project 6 35768352 35783020 + Akr1d1 protein_coding processed_transcript MGP_129S1SvImJ_T0001985.1 MGP_129S1SvImJ_G0001898.1 mouse_genomes_project 6 43912456 43916109 + TEC TEC MGP_129S1SvImJ_T0100000.1 MGP_129S1SvImJ_G0038067.1 mouse_genomes_project 6 63037091 63037197 - Gm22212 snRNA snRNA MGP_129S1SvImJ_T0008710.1 MGP_129S1SvImJ_G0007040.1 mouse_genomes_project 6 109878918 109883856 + 4933431M02Rik lincRNA lincRNA MGP_129S1SvImJ_T0002173.1 MGP_129S1SvImJ_G0002085.1 mouse_genomes_project 6 132700191 132700388 - TEC TEC MGP_129S1SvImJ_T0015491.1 MGP_129S1SvImJ_G0013580.1 mouse_genomes_project 6 86189158 86189591 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077407.1 MGP_129S1SvImJ_G0030707.1 mouse_genomes_project 6 47657411 47664055 - MGP_129S1SvImJ_P0077407 Gimap6 protein_coding protein_coding MGP_129S1SvImJ_T0077408.1 MGP_129S1SvImJ_G0030707.1 mouse_genomes_project 6 47657412 47664043 - MGP_129S1SvImJ_P0077408 Gimap6 protein_coding protein_coding MGP_129S1SvImJ_T0077409.1 MGP_129S1SvImJ_G0030707.1 mouse_genomes_project 6 47659563 47664026 - MGP_129S1SvImJ_P0077409 Gimap6 protein_coding protein_coding MGP_129S1SvImJ_T0077410.1 MGP_129S1SvImJ_G0030707.1 mouse_genomes_project 6 47660251 47662066 - Gimap6 protein_coding processed_transcript MGP_129S1SvImJ_T0002756.1 MGP_129S1SvImJ_G0002631.1 mouse_genomes_project 6 39695251 39695542 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0077325.1 MGP_129S1SvImJ_G0030687.1 mouse_genomes_project 6 46826780 46838943 + MGP_129S1SvImJ_P0077325 Zfp212 protein_coding protein_coding MGP_129S1SvImJ_T0077326.1 MGP_129S1SvImJ_G0030687.1 mouse_genomes_project 6 46832609 46833450 + Zfp212 protein_coding retained_intron MGP_129S1SvImJ_T0010787.1 MGP_129S1SvImJ_G0008903.1 mouse_genomes_project 6 50824505 50824582 + Gm22914 miRNA miRNA MGP_129S1SvImJ_T0100031.1 MGP_129S1SvImJ_G0038098.1 mouse_genomes_project 6 133721877 133721943 + Gm22555 snRNA snRNA MGP_129S1SvImJ_T0004991.1 MGP_129S1SvImJ_G0004283.1 mouse_genomes_project 6 66959922 66961160 - antisense antisense MGP_129S1SvImJ_T0079545.1 MGP_129S1SvImJ_G0031163.1 mouse_genomes_project 6 118865464 118924637 + MGP_129S1SvImJ_P0079545 Fam21 protein_coding protein_coding MGP_129S1SvImJ_T0079546.1 MGP_129S1SvImJ_G0031163.1 mouse_genomes_project 6 118865472 118916528 + MGP_129S1SvImJ_P0079546 Fam21 protein_coding protein_coding MGP_129S1SvImJ_T0079547.1 MGP_129S1SvImJ_G0031163.1 mouse_genomes_project 6 118865482 118877974 + MGP_129S1SvImJ_P0079547 Fam21 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079548.1 MGP_129S1SvImJ_G0031163.1 mouse_genomes_project 6 118865521 118866749 + Fam21 protein_coding retained_intron MGP_129S1SvImJ_T0079549.1 MGP_129S1SvImJ_G0031163.1 mouse_genomes_project 6 118865548 118871395 + MGP_129S1SvImJ_P0079549 Fam21 protein_coding protein_coding MGP_129S1SvImJ_T0079550.1 MGP_129S1SvImJ_G0031163.1 mouse_genomes_project 6 118865563 118873575 + MGP_129S1SvImJ_P0079550 Fam21 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079551.1 MGP_129S1SvImJ_G0031163.1 mouse_genomes_project 6 118865632 118924616 + Fam21 protein_coding retained_intron MGP_129S1SvImJ_T0079552.1 MGP_129S1SvImJ_G0031163.1 mouse_genomes_project 6 118865942 118920439 + MGP_129S1SvImJ_P0079552 Fam21 protein_coding protein_coding MGP_129S1SvImJ_T0079553.1 MGP_129S1SvImJ_G0031163.1 mouse_genomes_project 6 118877978 118885065 + Fam21 protein_coding retained_intron MGP_129S1SvImJ_T0079554.1 MGP_129S1SvImJ_G0031163.1 mouse_genomes_project 6 118880494 118887572 + MGP_129S1SvImJ_P0079554 Fam21 protein_coding protein_coding MGP_129S1SvImJ_T0079555.1 MGP_129S1SvImJ_G0031163.1 mouse_genomes_project 6 118886114 118889964 + Fam21 protein_coding retained_intron MGP_129S1SvImJ_T0079556.1 MGP_129S1SvImJ_G0031163.1 mouse_genomes_project 6 118917261 118918284 + Fam21 protein_coding retained_intron MGP_129S1SvImJ_T0079557.1 MGP_129S1SvImJ_G0031163.1 mouse_genomes_project 6 118918011 118920424 + Fam21 protein_coding retained_intron MGP_129S1SvImJ_T0077381.1 MGP_129S1SvImJ_G0030699.1 mouse_genomes_project 6 47539717 47564603 + MGP_129S1SvImJ_P0077381 Gm45021 protein_coding protein_coding MGP_129S1SvImJ_T0077908.1 MGP_129S1SvImJ_G0030843.1 mouse_genomes_project 6 67005267 67007578 - MGP_129S1SvImJ_P0077908 Gadd45a protein_coding protein_coding MGP_129S1SvImJ_T0077909.1 MGP_129S1SvImJ_G0030843.1 mouse_genomes_project 6 67005630 67007373 - Gadd45a protein_coding retained_intron MGP_129S1SvImJ_T0077910.1 MGP_129S1SvImJ_G0030843.1 mouse_genomes_project 6 67005630 67007536 - MGP_129S1SvImJ_P0077910 Gadd45a protein_coding protein_coding MGP_129S1SvImJ_T0077911.1 MGP_129S1SvImJ_G0030843.1 mouse_genomes_project 6 67005637 67007423 - MGP_129S1SvImJ_P0077911 Gadd45a protein_coding protein_coding MGP_129S1SvImJ_T0077912.1 MGP_129S1SvImJ_G0030843.1 mouse_genomes_project 6 67005750 67007358 - Gadd45a protein_coding retained_intron MGP_129S1SvImJ_T0077913.1 MGP_129S1SvImJ_G0030843.1 mouse_genomes_project 6 67006542 67007549 - Gadd45a protein_coding retained_intron MGP_129S1SvImJ_T0077914.1 MGP_129S1SvImJ_G0030843.1 mouse_genomes_project 6 67007068 67007629 - Gadd45a protein_coding retained_intron MGP_129S1SvImJ_T0077578.1 MGP_129S1SvImJ_G0030750.1 mouse_genomes_project 6 51501260 51505977 - MGP_129S1SvImJ_P0077578 Hoxa13 protein_coding protein_coding MGP_129S1SvImJ_T0077579.1 MGP_129S1SvImJ_G0030750.1 mouse_genomes_project 6 51502419 51506054 - MGP_129S1SvImJ_P0077579 Hoxa13 protein_coding protein_coding MGP_129S1SvImJ_T0077580.1 MGP_129S1SvImJ_G0030750.1 mouse_genomes_project 6 51502437 51505976 - Hoxa13 protein_coding processed_transcript MGP_129S1SvImJ_T0077581.1 MGP_129S1SvImJ_G0030750.1 mouse_genomes_project 6 51502437 51505976 - Hoxa13 protein_coding processed_transcript MGP_129S1SvImJ_T0077582.1 MGP_129S1SvImJ_G0030750.1 mouse_genomes_project 6 51502437 51505976 - Hoxa13 protein_coding processed_transcript MGP_129S1SvImJ_T0077583.1 MGP_129S1SvImJ_G0030750.1 mouse_genomes_project 6 51502437 51505976 - MGP_129S1SvImJ_P0077583 Hoxa13 protein_coding protein_coding MGP_129S1SvImJ_T0010777.1 MGP_129S1SvImJ_G0008893.1 mouse_genomes_project 6 28967488 28967559 - Mir29b-1 miRNA miRNA MGP_129S1SvImJ_T0076635.1 MGP_129S1SvImJ_G0030523.1 mouse_genomes_project 6 27226565 27235210 + Flnc protein_coding retained_intron MGP_129S1SvImJ_T0076636.1 MGP_129S1SvImJ_G0030523.1 mouse_genomes_project 6 27226585 27259410 + MGP_129S1SvImJ_P0076636 Flnc protein_coding protein_coding MGP_129S1SvImJ_T0076637.1 MGP_129S1SvImJ_G0030523.1 mouse_genomes_project 6 27226585 27259410 + MGP_129S1SvImJ_P0076637 Flnc protein_coding protein_coding MGP_129S1SvImJ_T0076802.1 MGP_129S1SvImJ_G0030547.1 mouse_genomes_project 6 28855774 28858823 - MGP_129S1SvImJ_P0076802 Klf14 protein_coding protein_coding MGP_129S1SvImJ_T0015482.1 MGP_129S1SvImJ_G0013571.1 mouse_genomes_project 6 84612247 84613149 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000317.1 MGP_129S1SvImJ_G0000259.1 mouse_genomes_project 6 68807669 68808128 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0100033.1 MGP_129S1SvImJ_G0038100.1 mouse_genomes_project 6 134101211 134101286 + Gm24676 snRNA snRNA MGP_129S1SvImJ_T0077771.1 MGP_129S1SvImJ_G0030803.1 mouse_genomes_project 6 57221678 57261978 + MGP_129S1SvImJ_P0077771 Lancl2 protein_coding protein_coding MGP_129S1SvImJ_T0077772.1 MGP_129S1SvImJ_G0030803.1 mouse_genomes_project 6 57221774 57261015 + MGP_129S1SvImJ_P0077772 Lancl2 protein_coding protein_coding MGP_129S1SvImJ_T0077773.1 MGP_129S1SvImJ_G0030803.1 mouse_genomes_project 6 57222225 57261977 + MGP_129S1SvImJ_P0077773 Lancl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0015481.1 MGP_129S1SvImJ_G0013570.1 mouse_genomes_project 6 83989373 83990130 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008499.1 MGP_129S1SvImJ_G0006892.1 mouse_genomes_project 6 1588558 1597556 - Gm20714 lincRNA lincRNA MGP_129S1SvImJ_T0008500.1 MGP_129S1SvImJ_G0006892.1 mouse_genomes_project 6 1588558 1588938 - Gm20714 lincRNA lincRNA MGP_129S1SvImJ_T0008501.1 MGP_129S1SvImJ_G0006892.1 mouse_genomes_project 6 1588560 1594715 - Gm20714 lincRNA lincRNA MGP_129S1SvImJ_T0008564.1 MGP_129S1SvImJ_G0006932.1 mouse_genomes_project 6 30092840 30093924 + Gm13850 lincRNA lincRNA MGP_129S1SvImJ_T0005088.1 MGP_129S1SvImJ_G0004342.1 mouse_genomes_project 6 116560525 116612620 + Gm15083 antisense antisense MGP_129S1SvImJ_T0079591.1 MGP_129S1SvImJ_G0031173.1 mouse_genomes_project 6 119309981 119315415 - MGP_129S1SvImJ_P0079591 protein_coding protein_coding MGP_129S1SvImJ_T0079592.1 MGP_129S1SvImJ_G0031173.1 mouse_genomes_project 6 119310869 119315117 - MGP_129S1SvImJ_P0079592 protein_coding protein_coding MGP_129S1SvImJ_T0079593.1 MGP_129S1SvImJ_G0031173.1 mouse_genomes_project 6 119310869 119315338 - MGP_129S1SvImJ_P0079593 protein_coding protein_coding MGP_129S1SvImJ_T0079594.1 MGP_129S1SvImJ_G0031173.1 mouse_genomes_project 6 119310887 119313115 - protein_coding processed_transcript MGP_129S1SvImJ_T0000191.1 MGP_129S1SvImJ_G0000146.1 mouse_genomes_project 6 69849355 69849849 - MGP_129S1SvImJ_P0000191 Igkv4-70 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0002208.1 MGP_129S1SvImJ_G0002120.1 mouse_genomes_project 6 153278698 153282177 + TEC TEC MGP_129S1SvImJ_T0015459.1 MGP_129S1SvImJ_G0013548.1 mouse_genomes_project 6 72585344 72586446 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002094.1 MGP_129S1SvImJ_G0002007.1 mouse_genomes_project 6 90193967 90198802 - TEC TEC MGP_129S1SvImJ_T0078140.1 MGP_129S1SvImJ_G0030890.1 mouse_genomes_project 6 77650107 78797283 - MGP_129S1SvImJ_P0078140 Ctnna2 protein_coding protein_coding MGP_129S1SvImJ_T0078141.1 MGP_129S1SvImJ_G0030890.1 mouse_genomes_project 6 77650107 78797283 - MGP_129S1SvImJ_P0078141 Ctnna2 protein_coding protein_coding MGP_129S1SvImJ_T0078142.1 MGP_129S1SvImJ_G0030890.1 mouse_genomes_project 6 77650110 78797134 - MGP_129S1SvImJ_P0078142 Ctnna2 protein_coding protein_coding MGP_129S1SvImJ_T0078143.1 MGP_129S1SvImJ_G0030890.1 mouse_genomes_project 6 77651020 78797144 - MGP_129S1SvImJ_P0078143 Ctnna2 protein_coding protein_coding MGP_129S1SvImJ_T0078144.1 MGP_129S1SvImJ_G0030890.1 mouse_genomes_project 6 77651226 77673499 - Ctnna2 protein_coding retained_intron MGP_129S1SvImJ_T0078145.1 MGP_129S1SvImJ_G0030890.1 mouse_genomes_project 6 77687822 77928123 - MGP_129S1SvImJ_P0078145 Ctnna2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078150.1 MGP_129S1SvImJ_G0030890.1 mouse_genomes_project 6 78411213 78797144 - MGP_129S1SvImJ_P0078150 Ctnna2 protein_coding protein_coding MGP_129S1SvImJ_T0078151.1 MGP_129S1SvImJ_G0030890.1 mouse_genomes_project 6 78416803 78727000 - MGP_129S1SvImJ_P0078151 Ctnna2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0078152.1 MGP_129S1SvImJ_G0030890.1 mouse_genomes_project 6 78740106 78797169 - Ctnna2 protein_coding processed_transcript MGP_129S1SvImJ_T0015403.1 MGP_129S1SvImJ_G0013492.1 mouse_genomes_project 6 64910614 64911176 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076527.1 MGP_129S1SvImJ_G0030502.1 mouse_genomes_project 6 22507155 22512312 - MGP_129S1SvImJ_P0076527 Tmem229a protein_coding protein_coding MGP_129S1SvImJ_T0015457.1 MGP_129S1SvImJ_G0013546.1 mouse_genomes_project 6 72375762 72376996 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015630.1 MGP_129S1SvImJ_G0013719.1 mouse_genomes_project 6 132291393 132291550 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102638.1 MGP_129S1SvImJ_G0040471.1 mouse_genomes_project 6 124942928 124982072 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0077010.1 MGP_129S1SvImJ_G0030587.1 mouse_genomes_project 6 36858831 36864778 + Fmc1 protein_coding processed_transcript MGP_129S1SvImJ_T0077011.1 MGP_129S1SvImJ_G0030587.1 mouse_genomes_project 6 36860152 36864779 + MGP_129S1SvImJ_P0077011 Fmc1 protein_coding protein_coding MGP_129S1SvImJ_T0080332.1 MGP_129S1SvImJ_G0031320.1 mouse_genomes_project 6 131920450 131957251 - MGP_129S1SvImJ_P0080332 Tulp3 protein_coding protein_coding MGP_129S1SvImJ_T0080333.1 MGP_129S1SvImJ_G0031320.1 mouse_genomes_project 6 131923464 131925987 - Tulp3 protein_coding processed_transcript MGP_129S1SvImJ_T0080334.1 MGP_129S1SvImJ_G0031320.1 mouse_genomes_project 6 131932076 131957241 - Tulp3 protein_coding retained_intron MGP_129S1SvImJ_T0080335.1 MGP_129S1SvImJ_G0031320.1 mouse_genomes_project 6 131934710 131957215 - MGP_129S1SvImJ_P0080335 Tulp3 protein_coding protein_coding MGP_129S1SvImJ_T0080336.1 MGP_129S1SvImJ_G0031320.1 mouse_genomes_project 6 131941447 131944872 - Tulp3 protein_coding retained_intron MGP_129S1SvImJ_T0080337.1 MGP_129S1SvImJ_G0031320.1 mouse_genomes_project 6 131942126 131957225 - MGP_129S1SvImJ_P0080337 Tulp3 protein_coding protein_coding MGP_129S1SvImJ_T0008698.1 MGP_129S1SvImJ_G0007030.1 mouse_genomes_project 6 101947923 101976481 - Gm44290 lincRNA lincRNA MGP_129S1SvImJ_T0080900.1 MGP_129S1SvImJ_G0031473.1 mouse_genomes_project 6 148007176 148062533 + MGP_129S1SvImJ_P0080900 Etnk1 protein_coding protein_coding MGP_129S1SvImJ_T0080901.1 MGP_129S1SvImJ_G0031473.1 mouse_genomes_project 6 148007185 148052627 + MGP_129S1SvImJ_P0080901 Etnk1 protein_coding protein_coding MGP_129S1SvImJ_T0080902.1 MGP_129S1SvImJ_G0031473.1 mouse_genomes_project 6 148007209 148034484 + Etnk1 protein_coding retained_intron MGP_129S1SvImJ_T0080903.1 MGP_129S1SvImJ_G0031473.1 mouse_genomes_project 6 148007209 148076343 + MGP_129S1SvImJ_P0080903 Etnk1 protein_coding protein_coding MGP_129S1SvImJ_T0015348.1 MGP_129S1SvImJ_G0013437.1 mouse_genomes_project 6 46721153 46721486 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005027.1 MGP_129S1SvImJ_G0004306.1 mouse_genomes_project 6 87650667 87653413 - Gm44941 antisense antisense MGP_129S1SvImJ_T0018340.1 MGP_129S1SvImJ_G0015647.1 mouse_genomes_project 6 125654798 125668421 - Gm16556 processed_transcript processed_transcript MGP_129S1SvImJ_T0018341.1 MGP_129S1SvImJ_G0015647.1 mouse_genomes_project 6 125654824 125668397 - Gm16556 processed_transcript processed_transcript MGP_129S1SvImJ_T0080594.1 MGP_129S1SvImJ_G0031412.1 mouse_genomes_project 6 139327096 139340798 + MGP_129S1SvImJ_P0080594 Ddx47 protein_coding protein_coding MGP_129S1SvImJ_T0080595.1 MGP_129S1SvImJ_G0031412.1 mouse_genomes_project 6 139327106 139336054 + MGP_129S1SvImJ_P0080595 Ddx47 protein_coding protein_coding MGP_129S1SvImJ_T0080596.1 MGP_129S1SvImJ_G0031412.1 mouse_genomes_project 6 139327108 139336018 + MGP_129S1SvImJ_P0080596 Ddx47 protein_coding protein_coding MGP_129S1SvImJ_T0080597.1 MGP_129S1SvImJ_G0031412.1 mouse_genomes_project 6 139327110 139333644 + Ddx47 protein_coding retained_intron MGP_129S1SvImJ_T0080598.1 MGP_129S1SvImJ_G0031412.1 mouse_genomes_project 6 139327116 139340794 + Ddx47 protein_coding retained_intron MGP_129S1SvImJ_T0080599.1 MGP_129S1SvImJ_G0031412.1 mouse_genomes_project 6 139327117 139335133 + MGP_129S1SvImJ_P0080599 Ddx47 protein_coding protein_coding MGP_129S1SvImJ_T0080600.1 MGP_129S1SvImJ_G0031412.1 mouse_genomes_project 6 139327119 139332641 + Ddx47 protein_coding retained_intron MGP_129S1SvImJ_T0080601.1 MGP_129S1SvImJ_G0031412.1 mouse_genomes_project 6 139327128 139338576 + MGP_129S1SvImJ_P0080601 Ddx47 protein_coding protein_coding MGP_129S1SvImJ_T0080602.1 MGP_129S1SvImJ_G0031412.1 mouse_genomes_project 6 139327137 139338599 + MGP_129S1SvImJ_P0080602 Ddx47 protein_coding protein_coding MGP_129S1SvImJ_T0080603.1 MGP_129S1SvImJ_G0031412.1 mouse_genomes_project 6 139332365 139336083 + Ddx47 protein_coding processed_transcript MGP_129S1SvImJ_T0080604.1 MGP_129S1SvImJ_G0031412.1 mouse_genomes_project 6 139332836 139335551 + Ddx47 protein_coding retained_intron MGP_129S1SvImJ_T0080605.1 MGP_129S1SvImJ_G0031412.1 mouse_genomes_project 6 139336016 139340794 + MGP_129S1SvImJ_P0080605 Ddx47 protein_coding protein_coding MGP_129S1SvImJ_T0002165.1 MGP_129S1SvImJ_G0002077.1 mouse_genomes_project 6 130821561 130821931 - TEC TEC MGP_129S1SvImJ_T0002066.1 MGP_129S1SvImJ_G0001979.1 mouse_genomes_project 6 86818775 86821076 + TEC TEC MGP_129S1SvImJ_T0015451.1 MGP_129S1SvImJ_G0013540.1 mouse_genomes_project 6 70834944 70836270 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008613.1 MGP_129S1SvImJ_G0006964.1 mouse_genomes_project 6 51507938 51512767 + Hottip lincRNA lincRNA MGP_129S1SvImJ_T0008614.1 MGP_129S1SvImJ_G0006964.1 mouse_genomes_project 6 51507947 51512243 + Hottip lincRNA lincRNA MGP_129S1SvImJ_T0015322.1 MGP_129S1SvImJ_G0013411.1 mouse_genomes_project 6 36576698 36577122 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015627.1 MGP_129S1SvImJ_G0013716.1 mouse_genomes_project 6 132218628 132218999 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076131.1 MGP_129S1SvImJ_G0030421.1 mouse_genomes_project 6 225028 350456 + MGP_129S1SvImJ_P0076131 Vps50 protein_coding protein_coding MGP_129S1SvImJ_T0076132.1 MGP_129S1SvImJ_G0030421.1 mouse_genomes_project 6 225050 348035 + MGP_129S1SvImJ_P0076132 Vps50 protein_coding protein_coding MGP_129S1SvImJ_T0076133.1 MGP_129S1SvImJ_G0030421.1 mouse_genomes_project 6 225068 350240 + MGP_129S1SvImJ_P0076133 Vps50 protein_coding protein_coding MGP_129S1SvImJ_T0076134.1 MGP_129S1SvImJ_G0030421.1 mouse_genomes_project 6 225072 249286 + Vps50 protein_coding retained_intron MGP_129S1SvImJ_T0076135.1 MGP_129S1SvImJ_G0030421.1 mouse_genomes_project 6 245978 263764 + Vps50 protein_coding processed_transcript MGP_129S1SvImJ_T0076136.1 MGP_129S1SvImJ_G0030421.1 mouse_genomes_project 6 299296 350240 + Vps50 protein_coding retained_intron MGP_129S1SvImJ_T0076137.1 MGP_129S1SvImJ_G0030421.1 mouse_genomes_project 6 315594 350240 + Vps50 protein_coding processed_transcript MGP_129S1SvImJ_T0076138.1 MGP_129S1SvImJ_G0030421.1 mouse_genomes_project 6 334347 339354 + Vps50 protein_coding retained_intron MGP_129S1SvImJ_T0076139.1 MGP_129S1SvImJ_G0030421.1 mouse_genomes_project 6 340314 347187 + Vps50 protein_coding processed_transcript MGP_129S1SvImJ_T0078247.1 MGP_129S1SvImJ_G0030913.1 mouse_genomes_project 6 84061618 84070740 + MGP_129S1SvImJ_P0078247 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0078248.1 MGP_129S1SvImJ_G0030913.1 mouse_genomes_project 6 84061779 84063671 + MGP_129S1SvImJ_P0078248 protein_coding non_stop_decay MGP_129S1SvImJ_T0076233.1 MGP_129S1SvImJ_G0030442.1 mouse_genomes_project 6 3877735 3951863 + MGP_129S1SvImJ_P0076233 Sdhaf3 protein_coding protein_coding MGP_129S1SvImJ_T0076234.1 MGP_129S1SvImJ_G0030442.1 mouse_genomes_project 6 3877738 3890161 + Sdhaf3 protein_coding processed_transcript MGP_129S1SvImJ_T0000021.1 MGP_129S1SvImJ_G0000015.1 mouse_genomes_project 6 71140577 71141109 + MGP_129S1SvImJ_P0000021 Igkc IG_C_gene IG_C_gene MGP_129S1SvImJ_T0002717.1 MGP_129S1SvImJ_G0002595.1 mouse_genomes_project 6 39749416 39749904 + MGP_129S1SvImJ_P0002717 Trbv29 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0015526.1 MGP_129S1SvImJ_G0013615.1 mouse_genomes_project 6 100665230 100665510 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078687.1 MGP_129S1SvImJ_G0031001.1 mouse_genomes_project 6 89215243 89223737 - MGP_129S1SvImJ_P0078687 Cnbp protein_coding protein_coding MGP_129S1SvImJ_T0078688.1 MGP_129S1SvImJ_G0031001.1 mouse_genomes_project 6 89215243 89223737 - MGP_129S1SvImJ_P0078688 Cnbp protein_coding protein_coding MGP_129S1SvImJ_T0078689.1 MGP_129S1SvImJ_G0031001.1 mouse_genomes_project 6 89215710 89223711 - MGP_129S1SvImJ_P0078689 Cnbp protein_coding protein_coding MGP_129S1SvImJ_T0078690.1 MGP_129S1SvImJ_G0031001.1 mouse_genomes_project 6 89215710 89223661 - MGP_129S1SvImJ_P0078690 Cnbp protein_coding protein_coding MGP_129S1SvImJ_T0078691.1 MGP_129S1SvImJ_G0031001.1 mouse_genomes_project 6 89216515 89223691 - MGP_129S1SvImJ_P0078691 Cnbp protein_coding protein_coding MGP_129S1SvImJ_T0078692.1 MGP_129S1SvImJ_G0031001.1 mouse_genomes_project 6 89216547 89223658 - Cnbp protein_coding retained_intron MGP_129S1SvImJ_T0078693.1 MGP_129S1SvImJ_G0031001.1 mouse_genomes_project 6 89216567 89223653 - Cnbp protein_coding retained_intron MGP_129S1SvImJ_T0078694.1 MGP_129S1SvImJ_G0031001.1 mouse_genomes_project 6 89216628 89223690 - Cnbp protein_coding retained_intron MGP_129S1SvImJ_T0078695.1 MGP_129S1SvImJ_G0031001.1 mouse_genomes_project 6 89218158 89218946 - Cnbp protein_coding retained_intron MGP_129S1SvImJ_T0078832.1 MGP_129S1SvImJ_G0031021.1 mouse_genomes_project 6 91098453 91129976 + MGP_129S1SvImJ_P0078832 Txnrd3 protein_coding protein_coding MGP_129S1SvImJ_T0078833.1 MGP_129S1SvImJ_G0031021.1 mouse_genomes_project 6 91098453 91129976 + MGP_129S1SvImJ_P0078833 Txnrd3 protein_coding protein_coding MGP_129S1SvImJ_T0077429.1 MGP_129S1SvImJ_G0030713.1 mouse_genomes_project 6 47803539 47809978 - MGP_129S1SvImJ_P0077429 Tmem176b protein_coding protein_coding MGP_129S1SvImJ_T0077430.1 MGP_129S1SvImJ_G0030713.1 mouse_genomes_project 6 47804108 47810246 - MGP_129S1SvImJ_P0077430 Tmem176b protein_coding protein_coding MGP_129S1SvImJ_T0077431.1 MGP_129S1SvImJ_G0030713.1 mouse_genomes_project 6 47804929 47810563 - MGP_129S1SvImJ_P0077431 Tmem176b protein_coding protein_coding MGP_129S1SvImJ_T0077432.1 MGP_129S1SvImJ_G0030713.1 mouse_genomes_project 6 47804929 47810981 - MGP_129S1SvImJ_P0077432 Tmem176b protein_coding protein_coding MGP_129S1SvImJ_T0077433.1 MGP_129S1SvImJ_G0030713.1 mouse_genomes_project 6 47804931 47810233 - MGP_129S1SvImJ_P0077433 Tmem176b protein_coding protein_coding MGP_129S1SvImJ_T0077434.1 MGP_129S1SvImJ_G0030713.1 mouse_genomes_project 6 47804998 47810080 - MGP_129S1SvImJ_P0077434 Tmem176b protein_coding protein_coding MGP_129S1SvImJ_T0077435.1 MGP_129S1SvImJ_G0030713.1 mouse_genomes_project 6 47805283 47809940 - Tmem176b protein_coding retained_intron MGP_129S1SvImJ_T0004944.1 MGP_129S1SvImJ_G0004246.1 mouse_genomes_project 6 30450243 30453824 + Plxna4os2 antisense antisense MGP_129S1SvImJ_T0102631.1 MGP_129S1SvImJ_G0040464.1 mouse_genomes_project 6 87628505 87629642 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0010808.1 MGP_129S1SvImJ_G0008924.1 mouse_genomes_project 6 100998239 100998386 - miRNA miRNA MGP_129S1SvImJ_T0077615.1 MGP_129S1SvImJ_G0030756.1 mouse_genomes_project 6 53144418 53149780 - MGP_129S1SvImJ_P0077615 Tril protein_coding protein_coding MGP_129S1SvImJ_T0076818.1 MGP_129S1SvImJ_G0030550.1 mouse_genomes_project 6 30029955 30040390 + 1700012A03Rik protein_coding processed_transcript MGP_129S1SvImJ_T0076819.1 MGP_129S1SvImJ_G0030550.1 mouse_genomes_project 6 30029977 30040390 + 1700012A03Rik protein_coding processed_transcript MGP_129S1SvImJ_T0076820.1 MGP_129S1SvImJ_G0030550.1 mouse_genomes_project 6 30029994 30040384 + MGP_129S1SvImJ_P0076820 1700012A03Rik protein_coding protein_coding MGP_129S1SvImJ_T0076821.1 MGP_129S1SvImJ_G0030550.1 mouse_genomes_project 6 30039609 30040090 + 1700012A03Rik protein_coding processed_transcript MGP_129S1SvImJ_T0005066.1 MGP_129S1SvImJ_G0004328.1 mouse_genomes_project 6 103130742 103275230 + Gm43948 antisense antisense MGP_129S1SvImJ_T0008509.1 MGP_129S1SvImJ_G0006895.1 mouse_genomes_project 6 3395338 3413425 + Gm20685 lincRNA lincRNA MGP_129S1SvImJ_T0078153.1 MGP_129S1SvImJ_G0030892.1 mouse_genomes_project 6 79037969 79038607 + MGP_129S1SvImJ_P0078153 protein_coding protein_coding MGP_129S1SvImJ_T0002163.1 MGP_129S1SvImJ_G0002075.1 mouse_genomes_project 6 130001361 130001892 - TEC TEC MGP_129S1SvImJ_T0078841.1 MGP_129S1SvImJ_G0031028.1 mouse_genomes_project 6 91547627 91548560 - MGP_129S1SvImJ_P0078841 Vmn1r49 protein_coding protein_coding MGP_129S1SvImJ_T0078842.1 MGP_129S1SvImJ_G0031028.1 mouse_genomes_project 6 91547627 91571854 - MGP_129S1SvImJ_P0078842 Vmn1r49 protein_coding protein_coding MGP_129S1SvImJ_T0000319.1 MGP_129S1SvImJ_G0000261.1 mouse_genomes_project 6 68888722 68908093 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0101255.1 MGP_129S1SvImJ_G0039322.1 mouse_genomes_project 6 68005101 68005241 - Gm25910 snoRNA snoRNA MGP_129S1SvImJ_T0077890.1 MGP_129S1SvImJ_G0030836.1 mouse_genomes_project 6 66481862 66494653 + MGP_129S1SvImJ_P0077890 Mad2l1 protein_coding protein_coding MGP_129S1SvImJ_T0077891.1 MGP_129S1SvImJ_G0030836.1 mouse_genomes_project 6 66481897 66488453 + Mad2l1 protein_coding retained_intron MGP_129S1SvImJ_T0077892.1 MGP_129S1SvImJ_G0030836.1 mouse_genomes_project 6 66481940 66488422 + MGP_129S1SvImJ_P0077892 Mad2l1 protein_coding protein_coding MGP_129S1SvImJ_T0077893.1 MGP_129S1SvImJ_G0030836.1 mouse_genomes_project 6 66482150 66482546 + Mad2l1 protein_coding processed_transcript MGP_129S1SvImJ_T0008703.1 MGP_129S1SvImJ_G0007035.1 mouse_genomes_project 6 103853985 103887362 + Gm9871 lincRNA lincRNA MGP_129S1SvImJ_T0008704.1 MGP_129S1SvImJ_G0007035.1 mouse_genomes_project 6 103867716 103887195 + Gm9871 lincRNA lincRNA MGP_129S1SvImJ_T0008705.1 MGP_129S1SvImJ_G0007035.1 mouse_genomes_project 6 103881597 103886990 + Gm9871 lincRNA lincRNA MGP_129S1SvImJ_T0015428.1 MGP_129S1SvImJ_G0013517.1 mouse_genomes_project 6 67235151 67235939 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080039.1 MGP_129S1SvImJ_G0031265.1 mouse_genomes_project 6 128047173 128054551 - MGP_129S1SvImJ_P0080039 protein_coding protein_coding MGP_129S1SvImJ_T0080040.1 MGP_129S1SvImJ_G0031265.1 mouse_genomes_project 6 128049801 128050255 - protein_coding processed_transcript MGP_129S1SvImJ_T0080041.1 MGP_129S1SvImJ_G0031265.1 mouse_genomes_project 6 128052348 128060684 - MGP_129S1SvImJ_P0080041 protein_coding protein_coding MGP_129S1SvImJ_T0000215.1 MGP_129S1SvImJ_G0000165.1 mouse_genomes_project 6 70419369 70419949 - MGP_129S1SvImJ_P0000215 Igkv6-32 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0015551.1 MGP_129S1SvImJ_G0013640.1 mouse_genomes_project 6 111694118 111694566 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015646.1 MGP_129S1SvImJ_G0013735.1 mouse_genomes_project 6 136067710 136068191 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002030.1 MGP_129S1SvImJ_G0001943.1 mouse_genomes_project 6 72337219 72337845 - TEC TEC MGP_129S1SvImJ_T0080474.1 MGP_129S1SvImJ_G0031357.1 mouse_genomes_project 6 133319959 133350324 - MGP_129S1SvImJ_P0080474 Klrc1 protein_coding protein_coding MGP_129S1SvImJ_T0080475.1 MGP_129S1SvImJ_G0031357.1 mouse_genomes_project 6 133346095 133350279 - MGP_129S1SvImJ_P0080475 Klrc1 protein_coding protein_coding MGP_129S1SvImJ_T0080476.1 MGP_129S1SvImJ_G0031357.1 mouse_genomes_project 6 133346096 133350324 - MGP_129S1SvImJ_P0080476 Klrc1 protein_coding protein_coding MGP_129S1SvImJ_T0080477.1 MGP_129S1SvImJ_G0031357.1 mouse_genomes_project 6 133346120 133350261 - MGP_129S1SvImJ_P0080477 Klrc1 protein_coding protein_coding MGP_129S1SvImJ_T0102660.1 MGP_129S1SvImJ_G0040493.1 mouse_genomes_project 6 137263069 137264014 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0080262.1 MGP_129S1SvImJ_G0031303.1 mouse_genomes_project 6 130088880 130093279 - MGP_129S1SvImJ_P0080262 Kcna1 protein_coding protein_coding MGP_129S1SvImJ_T0080263.1 MGP_129S1SvImJ_G0031303.1 mouse_genomes_project 6 130090147 130093296 - MGP_129S1SvImJ_P0080263 Kcna1 protein_coding protein_coding MGP_129S1SvImJ_T0080264.1 MGP_129S1SvImJ_G0031303.1 mouse_genomes_project 6 130092257 130094868 - Kcna1 protein_coding processed_transcript MGP_129S1SvImJ_T0078459.1 MGP_129S1SvImJ_G0030953.1 mouse_genomes_project 6 86598591 86613055 + MGP_129S1SvImJ_P0078459 Smyd5 protein_coding protein_coding MGP_129S1SvImJ_T0078460.1 MGP_129S1SvImJ_G0030953.1 mouse_genomes_project 6 86598604 86606970 + Smyd5 protein_coding retained_intron MGP_129S1SvImJ_T0078461.1 MGP_129S1SvImJ_G0030953.1 mouse_genomes_project 6 86598675 86599421 + Smyd5 protein_coding retained_intron MGP_129S1SvImJ_T0078462.1 MGP_129S1SvImJ_G0030953.1 mouse_genomes_project 6 86605771 86608583 + Smyd5 protein_coding retained_intron MGP_129S1SvImJ_T0078463.1 MGP_129S1SvImJ_G0030953.1 mouse_genomes_project 6 86608257 86612063 + Smyd5 protein_coding retained_intron MGP_129S1SvImJ_T0078464.1 MGP_129S1SvImJ_G0030953.1 mouse_genomes_project 6 86608352 86611580 + Smyd5 protein_coding processed_transcript MGP_129S1SvImJ_T0078465.1 MGP_129S1SvImJ_G0030953.1 mouse_genomes_project 6 86608367 86611817 + Smyd5 protein_coding retained_intron MGP_129S1SvImJ_T0078466.1 MGP_129S1SvImJ_G0030953.1 mouse_genomes_project 6 86609200 86612052 + Smyd5 protein_coding processed_transcript MGP_129S1SvImJ_T0000218.1 MGP_129S1SvImJ_G0000168.1 mouse_genomes_project 6 70486119 70486768 - MGP_129S1SvImJ_P0000218 Igkv6-29 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0008669.1 MGP_129S1SvImJ_G0007010.1 mouse_genomes_project 6 88953966 88955406 + Gm44201 lincRNA lincRNA MGP_129S1SvImJ_T0004997.1 MGP_129S1SvImJ_G0004288.1 mouse_genomes_project 6 72894522 72895952 - Gm45051 antisense antisense MGP_129S1SvImJ_T0000044.1 MGP_129S1SvImJ_G0000037.1 mouse_genomes_project 6 71136704 71136742 + MGP_129S1SvImJ_P0000044 Igkj1 IG_J_gene IG_J_gene MGP_129S1SvImJ_T0078944.1 MGP_129S1SvImJ_G0031051.1 mouse_genomes_project 6 93372359 93461337 - MGP_129S1SvImJ_P0078944 Grip2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0078945.1 MGP_129S1SvImJ_G0031051.1 mouse_genomes_project 6 93372363 93418413 - MGP_129S1SvImJ_P0078945 Grip2 protein_coding protein_coding MGP_129S1SvImJ_T0078946.1 MGP_129S1SvImJ_G0031051.1 mouse_genomes_project 6 93372363 93442576 - MGP_129S1SvImJ_P0078946 Grip2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078947.1 MGP_129S1SvImJ_G0031051.1 mouse_genomes_project 6 93374302 93418275 - MGP_129S1SvImJ_P0078947 Grip2 protein_coding protein_coding MGP_129S1SvImJ_T0078948.1 MGP_129S1SvImJ_G0031051.1 mouse_genomes_project 6 93394621 93418350 - MGP_129S1SvImJ_P0078948 Grip2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078949.1 MGP_129S1SvImJ_G0031051.1 mouse_genomes_project 6 93395688 93407201 - MGP_129S1SvImJ_P0078949 Grip2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078950.1 MGP_129S1SvImJ_G0031051.1 mouse_genomes_project 6 93403662 93407217 - Grip2 protein_coding retained_intron MGP_129S1SvImJ_T0004940.1 MGP_129S1SvImJ_G0004243.1 mouse_genomes_project 6 28576464 28584783 + Gm13782 antisense antisense MGP_129S1SvImJ_T0080618.1 MGP_129S1SvImJ_G0031417.1 mouse_genomes_project 6 139584629 139595232 - MGP_129S1SvImJ_P0080618 Gsg1 protein_coding protein_coding MGP_129S1SvImJ_T0080619.1 MGP_129S1SvImJ_G0031417.1 mouse_genomes_project 6 139584632 139602599 - MGP_129S1SvImJ_P0080619 Gsg1 protein_coding protein_coding MGP_129S1SvImJ_T0080620.1 MGP_129S1SvImJ_G0031417.1 mouse_genomes_project 6 139584632 139602755 - MGP_129S1SvImJ_P0080620 Gsg1 protein_coding protein_coding MGP_129S1SvImJ_T0080621.1 MGP_129S1SvImJ_G0031417.1 mouse_genomes_project 6 139584639 139602780 - MGP_129S1SvImJ_P0080621 Gsg1 protein_coding protein_coding MGP_129S1SvImJ_T0078828.1 MGP_129S1SvImJ_G0031020.1 mouse_genomes_project 6 90834067 91049127 - MGP_129S1SvImJ_P0078828 Chchd6 protein_coding protein_coding MGP_129S1SvImJ_T0078829.1 MGP_129S1SvImJ_G0031020.1 mouse_genomes_project 6 90834072 91049127 - MGP_129S1SvImJ_P0078829 Chchd6 protein_coding protein_coding MGP_129S1SvImJ_T0078830.1 MGP_129S1SvImJ_G0031020.1 mouse_genomes_project 6 90868946 91049079 - Chchd6 protein_coding retained_intron MGP_129S1SvImJ_T0078831.1 MGP_129S1SvImJ_G0031020.1 mouse_genomes_project 6 91018728 91049086 - MGP_129S1SvImJ_P0078831 Chchd6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0011856.1 MGP_129S1SvImJ_G0009948.1 mouse_genomes_project 6 133127322 133140431 - MGP_129S1SvImJ_P0011856 Clec7a polymorphic_pseudogene protein_coding MGP_129S1SvImJ_T0011857.1 MGP_129S1SvImJ_G0009948.1 mouse_genomes_project 6 133127322 133140426 - MGP_129S1SvImJ_P0011857 Clec7a polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0011858.1 MGP_129S1SvImJ_G0009948.1 mouse_genomes_project 6 133128757 133140431 - MGP_129S1SvImJ_P0011858 Clec7a polymorphic_pseudogene protein_coding MGP_129S1SvImJ_T0011859.1 MGP_129S1SvImJ_G0009948.1 mouse_genomes_project 6 133137118 133140433 - Clec7a polymorphic_pseudogene retained_intron MGP_129S1SvImJ_T0080445.1 MGP_129S1SvImJ_G0009948.1 mouse_genomes_project 6 133128772 133140339 - MGP_129S1SvImJ_P0080445 Clec7a polymorphic_pseudogene unknown_likely_coding MGP_129S1SvImJ_T0005127.1 MGP_129S1SvImJ_G0004377.1 mouse_genomes_project 6 139634591 139691473 + Gm44276 antisense antisense MGP_129S1SvImJ_T0015458.1 MGP_129S1SvImJ_G0013547.1 mouse_genomes_project 6 72428708 72429654 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080023.1 MGP_129S1SvImJ_G0031262.1 mouse_genomes_project 6 128024277 128043340 - MGP_129S1SvImJ_P0080023 Ptpn6 protein_coding protein_coding MGP_129S1SvImJ_T0080024.1 MGP_129S1SvImJ_G0031262.1 mouse_genomes_project 6 128024277 128043251 - MGP_129S1SvImJ_P0080024 Ptpn6 protein_coding protein_coding MGP_129S1SvImJ_T0080025.1 MGP_129S1SvImJ_G0031262.1 mouse_genomes_project 6 128024277 128036483 - MGP_129S1SvImJ_P0080025 Ptpn6 protein_coding protein_coding MGP_129S1SvImJ_T0080026.1 MGP_129S1SvImJ_G0031262.1 mouse_genomes_project 6 128024290 128025413 - MGP_129S1SvImJ_P0080026 Ptpn6 protein_coding protein_coding MGP_129S1SvImJ_T0080027.1 MGP_129S1SvImJ_G0031262.1 mouse_genomes_project 6 128024678 128043210 - MGP_129S1SvImJ_P0080027 Ptpn6 protein_coding protein_coding MGP_129S1SvImJ_T0080028.1 MGP_129S1SvImJ_G0031262.1 mouse_genomes_project 6 128028679 128030790 - MGP_129S1SvImJ_P0080028 Ptpn6 protein_coding protein_coding MGP_129S1SvImJ_T0080029.1 MGP_129S1SvImJ_G0031262.1 mouse_genomes_project 6 128028727 128030740 - MGP_129S1SvImJ_P0080029 Ptpn6 protein_coding protein_coding MGP_129S1SvImJ_T0080030.1 MGP_129S1SvImJ_G0031262.1 mouse_genomes_project 6 128031075 128032037 - Ptpn6 protein_coding retained_intron MGP_129S1SvImJ_T0080031.1 MGP_129S1SvImJ_G0031262.1 mouse_genomes_project 6 128032229 128036100 - Ptpn6 protein_coding processed_transcript MGP_129S1SvImJ_T0080032.1 MGP_129S1SvImJ_G0031262.1 mouse_genomes_project 6 128035690 128036411 - MGP_129S1SvImJ_P0080032 Ptpn6 protein_coding protein_coding MGP_129S1SvImJ_T0080033.1 MGP_129S1SvImJ_G0031262.1 mouse_genomes_project 6 128035983 128036439 - Ptpn6 protein_coding retained_intron MGP_129S1SvImJ_T0001937.1 MGP_129S1SvImJ_G0001850.1 mouse_genomes_project 6 2046866 2054832 - TEC TEC MGP_129S1SvImJ_T0099994.1 MGP_129S1SvImJ_G0038061.1 mouse_genomes_project 6 40115874 40115936 - Gm27549 snRNA snRNA MGP_129S1SvImJ_T0000154.1 MGP_129S1SvImJ_G0000117.1 mouse_genomes_project 6 68064291 68064778 - MGP_129S1SvImJ_P0000154 Igkv9-123 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0002174.1 MGP_129S1SvImJ_G0002086.1 mouse_genomes_project 6 133191058 133194026 + TEC TEC MGP_129S1SvImJ_T0015460.1 MGP_129S1SvImJ_G0013549.1 mouse_genomes_project 6 72599524 72600020 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002698.1 MGP_129S1SvImJ_G0002580.1 mouse_genomes_project 6 39536693 39537165 + MGP_129S1SvImJ_P0002698 Trbv5 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0005084.1 MGP_129S1SvImJ_G0004338.1 mouse_genomes_project 6 116146632 116148758 - Gm44199 antisense antisense MGP_129S1SvImJ_T0005109.1 MGP_129S1SvImJ_G0004362.1 mouse_genomes_project 6 130605019 130607779 + Gm43126 antisense antisense MGP_129S1SvImJ_T0078739.1 MGP_129S1SvImJ_G0031010.1 mouse_genomes_project 6 89862609 89894987 + MGP_129S1SvImJ_P0078739 Ruvbl1 protein_coding protein_coding MGP_129S1SvImJ_T0078740.1 MGP_129S1SvImJ_G0031010.1 mouse_genomes_project 6 89862927 89880490 + MGP_129S1SvImJ_P0078740 Ruvbl1 protein_coding protein_coding MGP_129S1SvImJ_T0015270.1 MGP_129S1SvImJ_G0013359.1 mouse_genomes_project 6 7728222 7729123 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015476.1 MGP_129S1SvImJ_G0013565.1 mouse_genomes_project 6 82361172 82361625 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005146.1 MGP_129S1SvImJ_G0004393.1 mouse_genomes_project 6 150165404 150170629 + Gm15543 antisense antisense MGP_129S1SvImJ_T0005647.1 MGP_129S1SvImJ_G0004758.1 mouse_genomes_project 6 88174878 88175920 - 2610306M01Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0008665.1 MGP_129S1SvImJ_G0007006.1 mouse_genomes_project 6 87784986 87785670 - Gm43936 lincRNA lincRNA MGP_129S1SvImJ_T0098376.1 MGP_129S1SvImJ_G0036461.1 mouse_genomes_project 6 68977273 68977555 - pseudogene pseudogene MGP_129S1SvImJ_T0011855.1 MGP_129S1SvImJ_G0009947.1 mouse_genomes_project 6 41343762 41344698 + MGP_129S1SvImJ_P0011855 Olfr451-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0079978.1 MGP_129S1SvImJ_G0031252.1 mouse_genomes_project 6 127266524 127315131 + MGP_129S1SvImJ_P0079978 protein_coding protein_coding MGP_129S1SvImJ_T0010765.1 MGP_129S1SvImJ_G0008881.1 mouse_genomes_project 6 16895668 16895788 + Mir6370 miRNA miRNA MGP_129S1SvImJ_T0102599.1 MGP_129S1SvImJ_G0040432.1 mouse_genomes_project 6 39983385 39984597 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0008755.1 MGP_129S1SvImJ_G0007076.1 mouse_genomes_project 6 135887304 135887988 - Gm43974 lincRNA lincRNA MGP_129S1SvImJ_T0077228.1 MGP_129S1SvImJ_G0030654.1 mouse_genomes_project 6 40990339 40991378 - MGP_129S1SvImJ_P0077228 Olfr457 protein_coding protein_coding MGP_129S1SvImJ_T0077229.1 MGP_129S1SvImJ_G0030654.1 mouse_genomes_project 6 40990412 40995513 - MGP_129S1SvImJ_P0077229 Olfr457 protein_coding protein_coding MGP_129S1SvImJ_T0077230.1 MGP_129S1SvImJ_G0030654.1 mouse_genomes_project 6 40990980 40995503 - MGP_129S1SvImJ_P0077230 Olfr457 protein_coding protein_coding MGP_129S1SvImJ_T0079840.1 MGP_129S1SvImJ_G0031213.1 mouse_genomes_project 6 124118749 124131994 + MGP_129S1SvImJ_P0079840 Pex26 protein_coding protein_coding MGP_129S1SvImJ_T0079841.1 MGP_129S1SvImJ_G0031213.1 mouse_genomes_project 6 124118749 124132001 + MGP_129S1SvImJ_P0079841 Pex26 protein_coding protein_coding MGP_129S1SvImJ_T0079842.1 MGP_129S1SvImJ_G0031213.1 mouse_genomes_project 6 124118884 124122524 + MGP_129S1SvImJ_P0079842 Pex26 protein_coding protein_coding MGP_129S1SvImJ_T0079843.1 MGP_129S1SvImJ_G0031213.1 mouse_genomes_project 6 124118971 124131994 + MGP_129S1SvImJ_P0079843 Pex26 protein_coding protein_coding MGP_129S1SvImJ_T0079844.1 MGP_129S1SvImJ_G0031213.1 mouse_genomes_project 6 124118980 124122164 + Pex26 protein_coding retained_intron MGP_129S1SvImJ_T0079845.1 MGP_129S1SvImJ_G0031213.1 mouse_genomes_project 6 124118980 124134610 + MGP_129S1SvImJ_P0079845 Pex26 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0005115.1 MGP_129S1SvImJ_G0004367.1 mouse_genomes_project 6 131985290 132008978 - Gm15862 antisense antisense MGP_129S1SvImJ_T0079913.1 MGP_129S1SvImJ_G0031229.1 mouse_genomes_project 6 125675398 125699714 - MGP_129S1SvImJ_P0079913 Apobec1 protein_coding protein_coding MGP_129S1SvImJ_T0079914.1 MGP_129S1SvImJ_G0031229.1 mouse_genomes_project 6 125675405 125697395 - MGP_129S1SvImJ_P0079914 Apobec1 protein_coding protein_coding MGP_129S1SvImJ_T0079915.1 MGP_129S1SvImJ_G0031229.1 mouse_genomes_project 6 125675407 125699641 - MGP_129S1SvImJ_P0079915 Apobec1 protein_coding protein_coding MGP_129S1SvImJ_T0079916.1 MGP_129S1SvImJ_G0031229.1 mouse_genomes_project 6 125678956 125699657 - MGP_129S1SvImJ_P0079916 Apobec1 protein_coding protein_coding MGP_129S1SvImJ_T0079917.1 MGP_129S1SvImJ_G0031229.1 mouse_genomes_project 6 125678982 125697626 - MGP_129S1SvImJ_P0079917 Apobec1 protein_coding protein_coding MGP_129S1SvImJ_T0079918.1 MGP_129S1SvImJ_G0031229.1 mouse_genomes_project 6 125679164 125699599 - MGP_129S1SvImJ_P0079918 Apobec1 protein_coding protein_coding MGP_129S1SvImJ_T0079919.1 MGP_129S1SvImJ_G0031229.1 mouse_genomes_project 6 125684584 125699640 - MGP_129S1SvImJ_P0079919 Apobec1 protein_coding protein_coding MGP_129S1SvImJ_T0079920.1 MGP_129S1SvImJ_G0031229.1 mouse_genomes_project 6 125685317 125699634 - Apobec1 protein_coding retained_intron MGP_129S1SvImJ_T0079921.1 MGP_129S1SvImJ_G0031229.1 mouse_genomes_project 6 125693885 125697706 - Apobec1 protein_coding retained_intron MGP_129S1SvImJ_T0002589.1 MGP_129S1SvImJ_G0002491.1 mouse_genomes_project 6 40043014 40043067 + MGP_129S1SvImJ_P0002589 Trbj1-6 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0004993.1 MGP_129S1SvImJ_G0004285.1 mouse_genomes_project 6 72026408 72027331 - 1700040L08Rik antisense antisense MGP_129S1SvImJ_T0079774.1 MGP_129S1SvImJ_G0031202.1 mouse_genomes_project 6 123208481 123243299 - MGP_129S1SvImJ_P0079774 Ccdc77 protein_coding protein_coding MGP_129S1SvImJ_T0079775.1 MGP_129S1SvImJ_G0031202.1 mouse_genomes_project 6 123208481 123252754 - MGP_129S1SvImJ_P0079775 Ccdc77 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079776.1 MGP_129S1SvImJ_G0031202.1 mouse_genomes_project 6 123209193 123243342 - MGP_129S1SvImJ_P0079776 Ccdc77 protein_coding protein_coding MGP_129S1SvImJ_T0079777.1 MGP_129S1SvImJ_G0031202.1 mouse_genomes_project 6 123215981 123243280 - MGP_129S1SvImJ_P0079777 Ccdc77 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079778.1 MGP_129S1SvImJ_G0031202.1 mouse_genomes_project 6 123219055 123243237 - MGP_129S1SvImJ_P0079778 Ccdc77 protein_coding protein_coding MGP_129S1SvImJ_T0079779.1 MGP_129S1SvImJ_G0031202.1 mouse_genomes_project 6 123219088 123243210 - MGP_129S1SvImJ_P0079779 Ccdc77 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079780.1 MGP_129S1SvImJ_G0031202.1 mouse_genomes_project 6 123222047 123243247 - Ccdc77 protein_coding retained_intron MGP_129S1SvImJ_T0079781.1 MGP_129S1SvImJ_G0031202.1 mouse_genomes_project 6 123229577 123234794 - Ccdc77 protein_coding retained_intron MGP_129S1SvImJ_T0079782.1 MGP_129S1SvImJ_G0031202.1 mouse_genomes_project 6 123234611 123252736 - MGP_129S1SvImJ_P0079782 Ccdc77 protein_coding protein_coding MGP_129S1SvImJ_T0079783.1 MGP_129S1SvImJ_G0031202.1 mouse_genomes_project 6 123239132 123243237 - Ccdc77 protein_coding retained_intron MGP_129S1SvImJ_T0008736.1 MGP_129S1SvImJ_G0007062.1 mouse_genomes_project 6 127617433 127618652 - 1700027F06Rik lincRNA lincRNA MGP_129S1SvImJ_T0011648.1 MGP_129S1SvImJ_G0009764.1 mouse_genomes_project 6 14967269 14967456 + Gm28008 misc_RNA misc_RNA MGP_129S1SvImJ_T0002132.1 MGP_129S1SvImJ_G0002045.1 mouse_genomes_project 6 105635840 105639432 + TEC TEC MGP_129S1SvImJ_T0077783.1 MGP_129S1SvImJ_G0030808.1 mouse_genomes_project 6 57468587 57469584 - MGP_129S1SvImJ_P0077783 Vmn1r23 protein_coding protein_coding MGP_129S1SvImJ_T0079393.1 MGP_129S1SvImJ_G0031137.1 mouse_genomes_project 6 116274359 116287013 - MGP_129S1SvImJ_P0079393 Sec13 protein_coding protein_coding MGP_129S1SvImJ_T0079394.1 MGP_129S1SvImJ_G0031137.1 mouse_genomes_project 6 116276727 116281340 - Sec13 protein_coding retained_intron MGP_129S1SvImJ_T0079395.1 MGP_129S1SvImJ_G0031137.1 mouse_genomes_project 6 116276893 116281340 - Sec13 protein_coding retained_intron MGP_129S1SvImJ_T0079396.1 MGP_129S1SvImJ_G0031137.1 mouse_genomes_project 6 116285398 116286997 - Sec13 protein_coding retained_intron MGP_129S1SvImJ_T0015415.1 MGP_129S1SvImJ_G0013504.1 mouse_genomes_project 6 65922985 65924561 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015477.1 MGP_129S1SvImJ_G0013566.1 mouse_genomes_project 6 82804614 82805305 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004958.1 MGP_129S1SvImJ_G0004258.1 mouse_genomes_project 6 37987239 37997127 - Gm16272 antisense antisense MGP_129S1SvImJ_T0011674.1 MGP_129S1SvImJ_G0009790.1 mouse_genomes_project 6 57081037 57081352 + Gm27896 misc_RNA misc_RNA MGP_129S1SvImJ_T0078029.1 MGP_129S1SvImJ_G0030867.1 mouse_genomes_project 6 72611240 72678376 + MGP_129S1SvImJ_P0078029 St3gal5 protein_coding protein_coding MGP_129S1SvImJ_T0078030.1 MGP_129S1SvImJ_G0030867.1 mouse_genomes_project 6 72611374 72670942 + MGP_129S1SvImJ_P0078030 St3gal5 protein_coding protein_coding MGP_129S1SvImJ_T0078031.1 MGP_129S1SvImJ_G0030867.1 mouse_genomes_project 6 72633523 72664804 + MGP_129S1SvImJ_P0078031 St3gal5 protein_coding protein_coding MGP_129S1SvImJ_T0018256.1 MGP_129S1SvImJ_G0015623.1 mouse_genomes_project 6 35462 46427 - processed_transcript lincRNA MGP_129S1SvImJ_T0018257.1 MGP_129S1SvImJ_G0015623.1 mouse_genomes_project 6 37838 46466 - processed_transcript lincRNA MGP_129S1SvImJ_T0018258.1 MGP_129S1SvImJ_G0015623.1 mouse_genomes_project 6 37989 46498 - processed_transcript retained_intron MGP_129S1SvImJ_T0010780.1 MGP_129S1SvImJ_G0008896.1 mouse_genomes_project 6 34874019 34874166 + Gm25111 miRNA miRNA MGP_129S1SvImJ_T0101925.1 MGP_129S1SvImJ_G0030688.1 mouse_genomes_project 6 46850434 46861814 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101926.1 MGP_129S1SvImJ_G0030688.1 mouse_genomes_project 6 46850458 46855410 + transcribed_unprocessed_pseudogene retained_intron MGP_129S1SvImJ_T0101927.1 MGP_129S1SvImJ_G0030688.1 mouse_genomes_project 6 46850466 46855428 + transcribed_unprocessed_pseudogene retained_intron MGP_129S1SvImJ_T0101928.1 MGP_129S1SvImJ_G0030688.1 mouse_genomes_project 6 46850471 46853988 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101929.1 MGP_129S1SvImJ_G0030688.1 mouse_genomes_project 6 46850471 46860418 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101930.1 MGP_129S1SvImJ_G0030688.1 mouse_genomes_project 6 46850513 46860839 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101931.1 MGP_129S1SvImJ_G0030688.1 mouse_genomes_project 6 46852692 46856250 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101932.1 MGP_129S1SvImJ_G0030688.1 mouse_genomes_project 6 46852760 46858599 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101933.1 MGP_129S1SvImJ_G0030688.1 mouse_genomes_project 6 46853152 46863176 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101934.1 MGP_129S1SvImJ_G0030688.1 mouse_genomes_project 6 46853165 46860840 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101935.1 MGP_129S1SvImJ_G0030688.1 mouse_genomes_project 6 46853934 46860839 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0077097.1 MGP_129S1SvImJ_G0030605.1 mouse_genomes_project 6 38779399 38852203 + MGP_129S1SvImJ_P0077097 Agk protein_coding protein_coding MGP_129S1SvImJ_T0077098.1 MGP_129S1SvImJ_G0030605.1 mouse_genomes_project 6 38779664 38851306 + MGP_129S1SvImJ_P0077098 Agk protein_coding unknown_likely_coding MGP_129S1SvImJ_T0077099.1 MGP_129S1SvImJ_G0030605.1 mouse_genomes_project 6 38779712 38824103 + Agk protein_coding retained_intron MGP_129S1SvImJ_T0077100.1 MGP_129S1SvImJ_G0030605.1 mouse_genomes_project 6 38779714 38780995 + Agk protein_coding retained_intron MGP_129S1SvImJ_T0077101.1 MGP_129S1SvImJ_G0030605.1 mouse_genomes_project 6 38779735 38803647 + Agk protein_coding retained_intron MGP_129S1SvImJ_T0077102.1 MGP_129S1SvImJ_G0030605.1 mouse_genomes_project 6 38783692 38802296 + Agk protein_coding processed_transcript MGP_129S1SvImJ_T0077103.1 MGP_129S1SvImJ_G0030605.1 mouse_genomes_project 6 38783692 38811730 + MGP_129S1SvImJ_P0077103 Agk protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077104.1 MGP_129S1SvImJ_G0030605.1 mouse_genomes_project 6 38804191 38807193 + Agk protein_coding retained_intron MGP_129S1SvImJ_T0077105.1 MGP_129S1SvImJ_G0030605.1 mouse_genomes_project 6 38831257 38850983 + Agk protein_coding retained_intron MGP_129S1SvImJ_T0078490.1 MGP_129S1SvImJ_G0030960.1 mouse_genomes_project 6 86971817 86977011 - MGP_129S1SvImJ_P0078490 protein_coding protein_coding MGP_129S1SvImJ_T0080389.1 MGP_129S1SvImJ_G0031333.1 mouse_genomes_project 6 132295671 132311805 + MGP_129S1SvImJ_P0080389 Clec2h protein_coding protein_coding MGP_129S1SvImJ_T0080390.1 MGP_129S1SvImJ_G0031333.1 mouse_genomes_project 6 132295672 132309419 + MGP_129S1SvImJ_P0080390 Clec2h protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080391.1 MGP_129S1SvImJ_G0031333.1 mouse_genomes_project 6 132295673 132309210 + MGP_129S1SvImJ_P0080391 Clec2h protein_coding protein_coding MGP_129S1SvImJ_T0080392.1 MGP_129S1SvImJ_G0031333.1 mouse_genomes_project 6 132295677 132309412 + Clec2h protein_coding retained_intron MGP_129S1SvImJ_T0008765.1 MGP_129S1SvImJ_G0007082.1 mouse_genomes_project 6 140021099 140044367 + 4930425L21Rik lincRNA lincRNA MGP_129S1SvImJ_T0008766.1 MGP_129S1SvImJ_G0007082.1 mouse_genomes_project 6 140039288 140045499 + 4930425L21Rik lincRNA lincRNA MGP_129S1SvImJ_T0008759.1 MGP_129S1SvImJ_G0007080.1 mouse_genomes_project 6 139233158 139263026 + Lockd lincRNA lincRNA MGP_129S1SvImJ_T0008760.1 MGP_129S1SvImJ_G0007080.1 mouse_genomes_project 6 139233164 139256396 + Lockd lincRNA lincRNA MGP_129S1SvImJ_T0008761.1 MGP_129S1SvImJ_G0007080.1 mouse_genomes_project 6 139233164 139256162 + Lockd lincRNA lincRNA MGP_129S1SvImJ_T0008762.1 MGP_129S1SvImJ_G0007080.1 mouse_genomes_project 6 139233199 139256394 + Lockd lincRNA lincRNA MGP_129S1SvImJ_T0008763.1 MGP_129S1SvImJ_G0007080.1 mouse_genomes_project 6 139233221 139256537 + Lockd lincRNA lincRNA MGP_129S1SvImJ_T0015600.1 MGP_129S1SvImJ_G0013689.1 mouse_genomes_project 6 125664283 125665043 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015663.1 MGP_129S1SvImJ_G0013752.1 mouse_genomes_project 6 141136707 141136986 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015687.1 MGP_129S1SvImJ_G0013776.1 mouse_genomes_project 6 154117695 154118107 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077148.1 MGP_129S1SvImJ_G0030626.1 mouse_genomes_project 6 39902790 39904543 + MGP_129S1SvImJ_P0077148 protein_coding protein_coding MGP_129S1SvImJ_T0010769.1 MGP_129S1SvImJ_G0008885.1 mouse_genomes_project 6 26781264 26781337 + Mir129-1 miRNA miRNA MGP_129S1SvImJ_T0079419.1 MGP_129S1SvImJ_G0031142.1 mouse_genomes_project 6 117222605 117452192 + MGP_129S1SvImJ_P0079419 Atg7 protein_coding protein_coding MGP_129S1SvImJ_T0079420.1 MGP_129S1SvImJ_G0031142.1 mouse_genomes_project 6 117222620 117452190 + MGP_129S1SvImJ_P0079420 Atg7 protein_coding protein_coding MGP_129S1SvImJ_T0079421.1 MGP_129S1SvImJ_G0031142.1 mouse_genomes_project 6 117222624 117266420 + Atg7 protein_coding retained_intron MGP_129S1SvImJ_T0079422.1 MGP_129S1SvImJ_G0031142.1 mouse_genomes_project 6 117222626 117259238 + MGP_129S1SvImJ_P0079422 Atg7 protein_coding protein_coding MGP_129S1SvImJ_T0079423.1 MGP_129S1SvImJ_G0031142.1 mouse_genomes_project 6 117222630 117449038 + MGP_129S1SvImJ_P0079423 Atg7 protein_coding protein_coding MGP_129S1SvImJ_T0079424.1 MGP_129S1SvImJ_G0031142.1 mouse_genomes_project 6 117222635 117254948 + MGP_129S1SvImJ_P0079424 Atg7 protein_coding protein_coding MGP_129S1SvImJ_T0079425.1 MGP_129S1SvImJ_G0031142.1 mouse_genomes_project 6 117222635 117449129 + MGP_129S1SvImJ_P0079425 Atg7 protein_coding protein_coding MGP_129S1SvImJ_T0079426.1 MGP_129S1SvImJ_G0031142.1 mouse_genomes_project 6 117222637 117449138 + MGP_129S1SvImJ_P0079426 Atg7 protein_coding protein_coding MGP_129S1SvImJ_T0079427.1 MGP_129S1SvImJ_G0031142.1 mouse_genomes_project 6 117222637 117449132 + MGP_129S1SvImJ_P0079427 Atg7 protein_coding protein_coding MGP_129S1SvImJ_T0079428.1 MGP_129S1SvImJ_G0031142.1 mouse_genomes_project 6 117222639 117267563 + MGP_129S1SvImJ_P0079428 Atg7 protein_coding protein_coding MGP_129S1SvImJ_T0079429.1 MGP_129S1SvImJ_G0031142.1 mouse_genomes_project 6 117229243 117266024 + MGP_129S1SvImJ_P0079429 Atg7 protein_coding protein_coding MGP_129S1SvImJ_T0079430.1 MGP_129S1SvImJ_G0031142.1 mouse_genomes_project 6 117232835 117267546 + MGP_129S1SvImJ_P0079430 Atg7 protein_coding protein_coding MGP_129S1SvImJ_T0079431.1 MGP_129S1SvImJ_G0031142.1 mouse_genomes_project 6 117239875 117255546 + MGP_129S1SvImJ_P0079431 Atg7 protein_coding protein_coding MGP_129S1SvImJ_T0079432.1 MGP_129S1SvImJ_G0031142.1 mouse_genomes_project 6 117261661 117285378 + Atg7 protein_coding processed_transcript MGP_129S1SvImJ_T0079433.1 MGP_129S1SvImJ_G0031142.1 mouse_genomes_project 6 117264790 117266835 + Atg7 protein_coding retained_intron MGP_129S1SvImJ_T0079434.1 MGP_129S1SvImJ_G0031142.1 mouse_genomes_project 6 117308078 117449132 + Atg7 protein_coding processed_transcript MGP_129S1SvImJ_T0079435.1 MGP_129S1SvImJ_G0031142.1 mouse_genomes_project 6 117446058 117449130 + Atg7 protein_coding processed_transcript MGP_129S1SvImJ_T0015430.1 MGP_129S1SvImJ_G0013519.1 mouse_genomes_project 6 67406310 67406731 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015622.1 MGP_129S1SvImJ_G0013711.1 mouse_genomes_project 6 130917651 130919301 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078481.1 MGP_129S1SvImJ_G0030956.1 mouse_genomes_project 6 86637392 86674076 - MGP_129S1SvImJ_P0078481 Fbxo41 protein_coding protein_coding MGP_129S1SvImJ_T0078482.1 MGP_129S1SvImJ_G0030956.1 mouse_genomes_project 6 86637396 86673968 - MGP_129S1SvImJ_P0078482 Fbxo41 protein_coding protein_coding MGP_129S1SvImJ_T0078483.1 MGP_129S1SvImJ_G0030956.1 mouse_genomes_project 6 86637398 86673940 - MGP_129S1SvImJ_P0078483 Fbxo41 protein_coding protein_coding MGP_129S1SvImJ_T0008630.1 MGP_129S1SvImJ_G0006978.1 mouse_genomes_project 6 60897878 60898567 - Gm43894 lincRNA lincRNA MGP_129S1SvImJ_T0077012.1 MGP_129S1SvImJ_G0030588.1 mouse_genomes_project 6 36879809 36935913 + MGP_129S1SvImJ_P0077012 Luc7l2 protein_coding protein_coding MGP_129S1SvImJ_T0077013.1 MGP_129S1SvImJ_G0030588.1 mouse_genomes_project 6 36879940 36940729 + MGP_129S1SvImJ_P0077013 Luc7l2 protein_coding protein_coding MGP_129S1SvImJ_T0077014.1 MGP_129S1SvImJ_G0030588.1 mouse_genomes_project 6 36879940 36937242 + MGP_129S1SvImJ_P0077014 Luc7l2 protein_coding protein_coding MGP_129S1SvImJ_T0077015.1 MGP_129S1SvImJ_G0030588.1 mouse_genomes_project 6 36880012 36940727 + MGP_129S1SvImJ_P0077015 Luc7l2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077016.1 MGP_129S1SvImJ_G0030588.1 mouse_genomes_project 6 36880029 36886413 + Luc7l2 protein_coding processed_transcript MGP_129S1SvImJ_T0077017.1 MGP_129S1SvImJ_G0030588.1 mouse_genomes_project 6 36880029 36886544 + Luc7l2 protein_coding retained_intron MGP_129S1SvImJ_T0077018.1 MGP_129S1SvImJ_G0030588.1 mouse_genomes_project 6 36880029 36882502 + Luc7l2 protein_coding processed_transcript MGP_129S1SvImJ_T0077019.1 MGP_129S1SvImJ_G0030588.1 mouse_genomes_project 6 36880301 36940686 + MGP_129S1SvImJ_P0077019 Luc7l2 protein_coding protein_coding MGP_129S1SvImJ_T0077020.1 MGP_129S1SvImJ_G0030588.1 mouse_genomes_project 6 36880341 36915317 + Luc7l2 protein_coding processed_transcript MGP_129S1SvImJ_T0077021.1 MGP_129S1SvImJ_G0030588.1 mouse_genomes_project 6 36884217 36919498 + MGP_129S1SvImJ_P0077021 Luc7l2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077022.1 MGP_129S1SvImJ_G0030588.1 mouse_genomes_project 6 36886135 36940208 + MGP_129S1SvImJ_P0077022 Luc7l2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077023.1 MGP_129S1SvImJ_G0030588.1 mouse_genomes_project 6 36887709 36898777 + Luc7l2 protein_coding retained_intron MGP_129S1SvImJ_T0077024.1 MGP_129S1SvImJ_G0030588.1 mouse_genomes_project 6 36899313 36936899 + Luc7l2 protein_coding retained_intron MGP_129S1SvImJ_T0079386.1 MGP_129S1SvImJ_G0031136.1 mouse_genomes_project 6 116262418 116266178 - MGP_129S1SvImJ_P0079386 Ghrl protein_coding protein_coding MGP_129S1SvImJ_T0079387.1 MGP_129S1SvImJ_G0031136.1 mouse_genomes_project 6 116262418 116263992 - MGP_129S1SvImJ_P0079387 Ghrl protein_coding protein_coding MGP_129S1SvImJ_T0079388.1 MGP_129S1SvImJ_G0031136.1 mouse_genomes_project 6 116262423 116265756 - MGP_129S1SvImJ_P0079388 Ghrl protein_coding protein_coding MGP_129S1SvImJ_T0079389.1 MGP_129S1SvImJ_G0031136.1 mouse_genomes_project 6 116262431 116266146 - MGP_129S1SvImJ_P0079389 Ghrl protein_coding protein_coding MGP_129S1SvImJ_T0079390.1 MGP_129S1SvImJ_G0031136.1 mouse_genomes_project 6 116262471 116265745 - MGP_129S1SvImJ_P0079390 Ghrl protein_coding protein_coding MGP_129S1SvImJ_T0079391.1 MGP_129S1SvImJ_G0031136.1 mouse_genomes_project 6 116262549 116265727 - MGP_129S1SvImJ_P0079391 Ghrl protein_coding protein_coding MGP_129S1SvImJ_T0079392.1 MGP_129S1SvImJ_G0031136.1 mouse_genomes_project 6 116265474 116265752 - Ghrl protein_coding retained_intron MGP_129S1SvImJ_T0002110.1 MGP_129S1SvImJ_G0002023.1 mouse_genomes_project 6 93633954 93635884 + TEC TEC MGP_129S1SvImJ_T0076500.1 MGP_129S1SvImJ_G0030491.1 mouse_genomes_project 6 21540304 21541204 - MGP_129S1SvImJ_P0076500 Tas2r118 protein_coding protein_coding MGP_129S1SvImJ_T0098629.1 MGP_129S1SvImJ_G0036714.1 mouse_genomes_project 6 150004518 150004633 - Gm23071 rRNA rRNA MGP_129S1SvImJ_T0077554.1 MGP_129S1SvImJ_G0030741.1 mouse_genomes_project 6 51404461 51454275 - MGP_129S1SvImJ_P0077554 Hoxa3 protein_coding protein_coding MGP_129S1SvImJ_T0077555.1 MGP_129S1SvImJ_G0030741.1 mouse_genomes_project 6 51408022 51422657 - MGP_129S1SvImJ_P0077555 Hoxa3 protein_coding protein_coding MGP_129S1SvImJ_T0077557.1 MGP_129S1SvImJ_G0030741.1 mouse_genomes_project 6 51418014 51423676 - Hoxa3 protein_coding processed_transcript MGP_129S1SvImJ_T0077559.1 MGP_129S1SvImJ_G0030741.1 mouse_genomes_project 6 51438925 51454496 - Hoxa3 protein_coding retained_intron MGP_129S1SvImJ_T0078819.1 MGP_129S1SvImJ_G0031018.1 mouse_genomes_project 6 90367836 90538573 + MGP_129S1SvImJ_P0078819 protein_coding protein_coding MGP_129S1SvImJ_T0078820.1 MGP_129S1SvImJ_G0031018.1 mouse_genomes_project 6 90524706 90536435 + protein_coding lincRNA MGP_129S1SvImJ_T0078821.1 MGP_129S1SvImJ_G0031018.1 mouse_genomes_project 6 90524706 90538574 + protein_coding lincRNA MGP_129S1SvImJ_T0078822.1 MGP_129S1SvImJ_G0031018.1 mouse_genomes_project 6 90529649 90536755 + protein_coding lincRNA MGP_129S1SvImJ_T0000198.1 MGP_129S1SvImJ_G0000153.1 mouse_genomes_project 6 70084100 70084600 - MGP_129S1SvImJ_P0000198 Igkv12-46 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0002089.1 MGP_129S1SvImJ_G0002002.1 mouse_genomes_project 6 89422052 89423828 - TEC TEC MGP_129S1SvImJ_T0080261.1 MGP_129S1SvImJ_G0031302.1 mouse_genomes_project 6 129979412 129982278 - MGP_129S1SvImJ_P0080261 Kcna5 protein_coding protein_coding MGP_129S1SvImJ_T0079770.1 MGP_129S1SvImJ_G0031200.1 mouse_genomes_project 6 123075359 123115935 - B4galnt3 protein_coding processed_transcript MGP_129S1SvImJ_T0079771.1 MGP_129S1SvImJ_G0031200.1 mouse_genomes_project 6 123075380 123176056 - MGP_129S1SvImJ_P0079771 B4galnt3 protein_coding protein_coding MGP_129S1SvImJ_T0079772.1 MGP_129S1SvImJ_G0031200.1 mouse_genomes_project 6 123076095 123176056 - MGP_129S1SvImJ_P0079772 B4galnt3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0080428.1 MGP_129S1SvImJ_G0031344.1 mouse_genomes_project 6 133006131 133024353 + MGP_129S1SvImJ_P0080428 Clec12a protein_coding protein_coding MGP_129S1SvImJ_T0080429.1 MGP_129S1SvImJ_G0031344.1 mouse_genomes_project 6 133013132 133016799 + Clec12a protein_coding retained_intron MGP_129S1SvImJ_T0080430.1 MGP_129S1SvImJ_G0031344.1 mouse_genomes_project 6 133013354 133030280 + MGP_129S1SvImJ_P0080430 Clec12a protein_coding protein_coding MGP_129S1SvImJ_T0080431.1 MGP_129S1SvImJ_G0031344.1 mouse_genomes_project 6 133019975 133029393 + Clec12a protein_coding retained_intron MGP_129S1SvImJ_T0102654.1 MGP_129S1SvImJ_G0040487.1 mouse_genomes_project 6 136934656 136935558 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0079946.1 MGP_129S1SvImJ_G0031238.1 mouse_genomes_project 6 126136411 126164033 + MGP_129S1SvImJ_P0079946 Clec4a4 protein_coding protein_coding MGP_129S1SvImJ_T0015444.1 MGP_129S1SvImJ_G0013533.1 mouse_genomes_project 6 68974494 68974975 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002008.1 MGP_129S1SvImJ_G0001921.1 mouse_genomes_project 6 51836874 51839557 + TEC TEC MGP_129S1SvImJ_T0002095.1 MGP_129S1SvImJ_G0002008.1 mouse_genomes_project 6 90215999 90219770 + TEC TEC MGP_129S1SvImJ_T0002157.1 MGP_129S1SvImJ_G0002069.1 mouse_genomes_project 6 123832474 123834564 - TEC TEC MGP_129S1SvImJ_T0015282.1 MGP_129S1SvImJ_G0013371.1 mouse_genomes_project 6 13424877 13425124 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101278.1 MGP_129S1SvImJ_G0039345.1 mouse_genomes_project 6 120850507 120850639 - Gm23908 snoRNA snoRNA MGP_129S1SvImJ_T0078987.1 MGP_129S1SvImJ_G0031060.1 mouse_genomes_project 6 94438517 94620771 - MGP_129S1SvImJ_P0078987 Adamts9 protein_coding protein_coding MGP_129S1SvImJ_T0078988.1 MGP_129S1SvImJ_G0031060.1 mouse_genomes_project 6 94463290 94534159 - Adamts9 protein_coding retained_intron MGP_129S1SvImJ_T0078991.1 MGP_129S1SvImJ_G0031060.1 mouse_genomes_project 6 94518603 94534169 - Adamts9 protein_coding retained_intron MGP_129S1SvImJ_T0078992.1 MGP_129S1SvImJ_G0031060.1 mouse_genomes_project 6 94524920 94528648 - Adamts9 protein_coding retained_intron MGP_129S1SvImJ_T0078994.1 MGP_129S1SvImJ_G0031060.1 mouse_genomes_project 6 94602637 94621108 - Adamts9 protein_coding processed_transcript MGP_129S1SvImJ_T0001972.1 MGP_129S1SvImJ_G0001885.1 mouse_genomes_project 6 32965806 32967038 + TEC TEC MGP_129S1SvImJ_T0001982.1 MGP_129S1SvImJ_G0001895.1 mouse_genomes_project 6 43784064 43787813 + TEC TEC MGP_129S1SvImJ_T0015628.1 MGP_129S1SvImJ_G0013717.1 mouse_genomes_project 6 132278570 132278684 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018301.1 MGP_129S1SvImJ_G0015633.1 mouse_genomes_project 6 53591385 53600540 - Gm15527 processed_transcript retained_intron MGP_129S1SvImJ_T0018302.1 MGP_129S1SvImJ_G0015633.1 mouse_genomes_project 6 53593810 53624620 - Gm15527 processed_transcript antisense MGP_129S1SvImJ_T0018303.1 MGP_129S1SvImJ_G0015633.1 mouse_genomes_project 6 53593826 53624622 - Gm15527 processed_transcript antisense MGP_129S1SvImJ_T0002044.1 MGP_129S1SvImJ_G0001957.1 mouse_genomes_project 6 78225496 78230328 - TEC TEC MGP_129S1SvImJ_T0101238.1 MGP_129S1SvImJ_G0039305.1 mouse_genomes_project 6 37804884 37805015 - Gm25402 snoRNA snoRNA MGP_129S1SvImJ_T0015490.1 MGP_129S1SvImJ_G0013579.1 mouse_genomes_project 6 86175540 86175934 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005024.1 MGP_129S1SvImJ_G0004303.1 mouse_genomes_project 6 86027256 86031128 + Gm44012 antisense antisense MGP_129S1SvImJ_T0077359.1 MGP_129S1SvImJ_G0030694.1 mouse_genomes_project 6 47386076 47443933 + MGP_129S1SvImJ_P0077359 Sspo protein_coding unknown_likely_coding MGP_129S1SvImJ_T0077360.1 MGP_129S1SvImJ_G0030694.1 mouse_genomes_project 6 47386076 47444069 + MGP_129S1SvImJ_P0077360 Sspo protein_coding protein_coding MGP_129S1SvImJ_T0077361.1 MGP_129S1SvImJ_G0030694.1 mouse_genomes_project 6 47386076 47444084 + MGP_129S1SvImJ_P0077361 Sspo protein_coding protein_coding MGP_129S1SvImJ_T0077362.1 MGP_129S1SvImJ_G0030694.1 mouse_genomes_project 6 47421813 47428699 + Sspo protein_coding retained_intron MGP_129S1SvImJ_T0077363.1 MGP_129S1SvImJ_G0030694.1 mouse_genomes_project 6 47429250 47444084 + MGP_129S1SvImJ_P0077363 Sspo protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077364.1 MGP_129S1SvImJ_G0030694.1 mouse_genomes_project 6 47436613 47439040 + MGP_129S1SvImJ_P0077364 Sspo protein_coding protein_coding MGP_129S1SvImJ_T0079847.1 MGP_129S1SvImJ_G0031215.1 mouse_genomes_project 6 124186069 124211881 + MGP_129S1SvImJ_P0079847 Usp18 protein_coding protein_coding MGP_129S1SvImJ_T0079848.1 MGP_129S1SvImJ_G0031215.1 mouse_genomes_project 6 124193864 124195822 + Usp18 protein_coding retained_intron MGP_129S1SvImJ_T0079849.1 MGP_129S1SvImJ_G0031215.1 mouse_genomes_project 6 124202484 124204221 + Usp18 protein_coding retained_intron MGP_129S1SvImJ_T0079850.1 MGP_129S1SvImJ_G0031215.1 mouse_genomes_project 6 124209551 124210467 + MGP_129S1SvImJ_P0079850 Usp18 protein_coding protein_coding MGP_129S1SvImJ_T0002087.1 MGP_129S1SvImJ_G0002000.1 mouse_genomes_project 6 89365624 89369163 + TEC TEC MGP_129S1SvImJ_T0015672.1 MGP_129S1SvImJ_G0013761.1 mouse_genomes_project 6 145758014 145758131 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076620.1 MGP_129S1SvImJ_G0030521.1 mouse_genomes_project 6 27165981 27169825 - MGP_129S1SvImJ_P0076620 Opn1sw protein_coding protein_coding MGP_129S1SvImJ_T0076621.1 MGP_129S1SvImJ_G0030521.1 mouse_genomes_project 6 27166694 27169743 - MGP_129S1SvImJ_P0076621 Opn1sw protein_coding protein_coding MGP_129S1SvImJ_T0076622.1 MGP_129S1SvImJ_G0030521.1 mouse_genomes_project 6 27168242 27169725 - Opn1sw protein_coding processed_transcript MGP_129S1SvImJ_T0076623.1 MGP_129S1SvImJ_G0030521.1 mouse_genomes_project 6 27168684 27180338 - MGP_129S1SvImJ_P0076623 Opn1sw protein_coding protein_coding MGP_129S1SvImJ_T0015610.1 MGP_129S1SvImJ_G0013699.1 mouse_genomes_project 6 128546509 128546837 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008785.1 MGP_129S1SvImJ_G0007096.1 mouse_genomes_project 6 150762136 150769704 - Gm15704 lincRNA lincRNA MGP_129S1SvImJ_T0102621.1 MGP_129S1SvImJ_G0040454.1 mouse_genomes_project 6 58055111 58056036 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0008525.1 MGP_129S1SvImJ_G0006906.1 mouse_genomes_project 6 13974277 13989248 + Gm36669 lincRNA lincRNA MGP_129S1SvImJ_T0098996.1 MGP_129S1SvImJ_G0037070.1 mouse_genomes_project 6 149614565 149616859 - Sox5it sense_intronic sense_intronic MGP_129S1SvImJ_T0004969.1 MGP_129S1SvImJ_G0004268.1 mouse_genomes_project 6 49687828 49716972 + 5430402O13Rik antisense antisense MGP_129S1SvImJ_T0004970.1 MGP_129S1SvImJ_G0004268.1 mouse_genomes_project 6 49687923 49716929 + 5430402O13Rik antisense antisense MGP_129S1SvImJ_T0080736.1 MGP_129S1SvImJ_G0031440.1 mouse_genomes_project 6 142708900 142725550 + MGP_129S1SvImJ_P0080736 Mgst1 protein_coding protein_coding MGP_129S1SvImJ_T0080737.1 MGP_129S1SvImJ_G0031440.1 mouse_genomes_project 6 142709112 142725400 + MGP_129S1SvImJ_P0080737 Mgst1 protein_coding protein_coding MGP_129S1SvImJ_T0080738.1 MGP_129S1SvImJ_G0031440.1 mouse_genomes_project 6 142709138 142725187 + MGP_129S1SvImJ_P0080738 Mgst1 protein_coding protein_coding MGP_129S1SvImJ_T0080739.1 MGP_129S1SvImJ_G0031440.1 mouse_genomes_project 6 142709155 142725537 + MGP_129S1SvImJ_P0080739 Mgst1 protein_coding protein_coding MGP_129S1SvImJ_T0080740.1 MGP_129S1SvImJ_G0031440.1 mouse_genomes_project 6 142709183 142725179 + MGP_129S1SvImJ_P0080740 Mgst1 protein_coding protein_coding MGP_129S1SvImJ_T0080741.1 MGP_129S1SvImJ_G0031440.1 mouse_genomes_project 6 142709956 142725354 + MGP_129S1SvImJ_P0080741 Mgst1 protein_coding protein_coding MGP_129S1SvImJ_T0080742.1 MGP_129S1SvImJ_G0031440.1 mouse_genomes_project 6 142710172 142725407 + MGP_129S1SvImJ_P0080742 Mgst1 protein_coding protein_coding MGP_129S1SvImJ_T0080743.1 MGP_129S1SvImJ_G0031440.1 mouse_genomes_project 6 142711443 142719296 + MGP_129S1SvImJ_P0080743 Mgst1 protein_coding protein_coding MGP_129S1SvImJ_T0015661.1 MGP_129S1SvImJ_G0013750.1 mouse_genomes_project 6 140905595 140906656 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079558.1 MGP_129S1SvImJ_G0031164.1 mouse_genomes_project 6 118926172 118995107 + MGP_129S1SvImJ_P0079558 Zfand4 protein_coding protein_coding MGP_129S1SvImJ_T0079559.1 MGP_129S1SvImJ_G0031164.1 mouse_genomes_project 6 118926196 118994293 + MGP_129S1SvImJ_P0079559 Zfand4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0015609.1 MGP_129S1SvImJ_G0013698.1 mouse_genomes_project 6 128462000 128468595 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000207.1 MGP_129S1SvImJ_G0000160.1 mouse_genomes_project 6 70313890 70314452 - MGP_129S1SvImJ_P0000207 Igkv5-37 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0079976.1 MGP_129S1SvImJ_G0031250.1 mouse_genomes_project 6 126993451 127040504 + MGP_129S1SvImJ_P0079976 Vmn2r24 protein_coding protein_coding MGP_129S1SvImJ_T0102622.1 MGP_129S1SvImJ_G0040455.1 mouse_genomes_project 6 58094162 58095062 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0077388.1 MGP_129S1SvImJ_G0030701.1 mouse_genomes_project 6 47545729 47564604 + Gm44965 protein_coding processed_transcript MGP_129S1SvImJ_T0077389.1 MGP_129S1SvImJ_G0030701.1 mouse_genomes_project 6 47545732 47570631 + MGP_129S1SvImJ_P0077389 Gm44965 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079855.1 MGP_129S1SvImJ_G0031217.1 mouse_genomes_project 6 124290352 124312601 + MGP_129S1SvImJ_P0079855 Slc6a12 protein_coding protein_coding MGP_129S1SvImJ_T0079856.1 MGP_129S1SvImJ_G0031217.1 mouse_genomes_project 6 124290675 124294884 + MGP_129S1SvImJ_P0079856 Slc6a12 protein_coding protein_coding MGP_129S1SvImJ_T0079857.1 MGP_129S1SvImJ_G0031217.1 mouse_genomes_project 6 124293894 124313004 + MGP_129S1SvImJ_P0079857 Slc6a12 protein_coding protein_coding MGP_129S1SvImJ_T0079858.1 MGP_129S1SvImJ_G0031217.1 mouse_genomes_project 6 124294695 124302599 + MGP_129S1SvImJ_P0079858 Slc6a12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079859.1 MGP_129S1SvImJ_G0031217.1 mouse_genomes_project 6 124294695 124312601 + MGP_129S1SvImJ_P0079859 Slc6a12 protein_coding protein_coding MGP_129S1SvImJ_T0079860.1 MGP_129S1SvImJ_G0031217.1 mouse_genomes_project 6 124304092 124309177 + Slc6a12 protein_coding retained_intron MGP_129S1SvImJ_T0079861.1 MGP_129S1SvImJ_G0031217.1 mouse_genomes_project 6 124304105 124310593 + Slc6a12 protein_coding retained_intron MGP_129S1SvImJ_T0079862.1 MGP_129S1SvImJ_G0031217.1 mouse_genomes_project 6 124304190 124312601 + MGP_129S1SvImJ_P0079862 Slc6a12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079863.1 MGP_129S1SvImJ_G0031217.1 mouse_genomes_project 6 124304190 124312601 + MGP_129S1SvImJ_P0079863 Slc6a12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079864.1 MGP_129S1SvImJ_G0031217.1 mouse_genomes_project 6 124306237 124311123 + Slc6a12 protein_coding retained_intron MGP_129S1SvImJ_T0015489.1 MGP_129S1SvImJ_G0013578.1 mouse_genomes_project 6 85915520 85917874 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002115.1 MGP_129S1SvImJ_G0002028.1 mouse_genomes_project 6 96579111 96580116 + TEC TEC MGP_129S1SvImJ_T0015574.1 MGP_129S1SvImJ_G0013663.1 mouse_genomes_project 6 119151162 119151682 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002195.1 MGP_129S1SvImJ_G0002107.1 mouse_genomes_project 6 145350895 145353174 - TEC TEC MGP_129S1SvImJ_T0102617.1 MGP_129S1SvImJ_G0040450.1 mouse_genomes_project 6 57654126 57654231 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015377.1 MGP_129S1SvImJ_G0013466.1 mouse_genomes_project 6 53105796 53106553 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078219.1 MGP_129S1SvImJ_G0030911.1 mouse_genomes_project 6 84054949 84058254 - MGP_129S1SvImJ_P0078219 Htra2 protein_coding protein_coding MGP_129S1SvImJ_T0078220.1 MGP_129S1SvImJ_G0030911.1 mouse_genomes_project 6 84054949 84058254 - MGP_129S1SvImJ_P0078220 Htra2 protein_coding protein_coding MGP_129S1SvImJ_T0078221.1 MGP_129S1SvImJ_G0030911.1 mouse_genomes_project 6 84054949 84058125 - MGP_129S1SvImJ_P0078221 Htra2 protein_coding protein_coding MGP_129S1SvImJ_T0078222.1 MGP_129S1SvImJ_G0030911.1 mouse_genomes_project 6 84054963 84058254 - MGP_129S1SvImJ_P0078222 Htra2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078223.1 MGP_129S1SvImJ_G0030911.1 mouse_genomes_project 6 84054967 84058956 - Htra2 protein_coding retained_intron MGP_129S1SvImJ_T0078224.1 MGP_129S1SvImJ_G0030911.1 mouse_genomes_project 6 84055070 84057369 - MGP_129S1SvImJ_P0078224 Htra2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078225.1 MGP_129S1SvImJ_G0030911.1 mouse_genomes_project 6 84055160 84057520 - MGP_129S1SvImJ_P0078225 Htra2 protein_coding protein_coding MGP_129S1SvImJ_T0078226.1 MGP_129S1SvImJ_G0030911.1 mouse_genomes_project 6 84055169 84057520 - Htra2 protein_coding retained_intron MGP_129S1SvImJ_T0078227.1 MGP_129S1SvImJ_G0030911.1 mouse_genomes_project 6 84055431 84057720 - MGP_129S1SvImJ_P0078227 Htra2 protein_coding protein_coding MGP_129S1SvImJ_T0078228.1 MGP_129S1SvImJ_G0030911.1 mouse_genomes_project 6 84056720 84058848 - Htra2 protein_coding processed_transcript MGP_129S1SvImJ_T0078229.1 MGP_129S1SvImJ_G0030911.1 mouse_genomes_project 6 84056829 84057568 - Htra2 protein_coding processed_transcript MGP_129S1SvImJ_T0078361.1 MGP_129S1SvImJ_G0030936.1 mouse_genomes_project 6 84693825 84700491 - MGP_129S1SvImJ_P0078361 Cd207 protein_coding protein_coding MGP_129S1SvImJ_T0077320.1 MGP_129S1SvImJ_G0030685.1 mouse_genomes_project 6 46742724 46750754 + Zfp398 protein_coding retained_intron MGP_129S1SvImJ_T0077321.1 MGP_129S1SvImJ_G0030685.1 mouse_genomes_project 6 46742727 46772076 + MGP_129S1SvImJ_P0077321 Zfp398 protein_coding protein_coding MGP_129S1SvImJ_T0077322.1 MGP_129S1SvImJ_G0030685.1 mouse_genomes_project 6 46742758 46777917 + MGP_129S1SvImJ_P0077322 Zfp398 protein_coding protein_coding MGP_129S1SvImJ_T0005123.1 MGP_129S1SvImJ_G0004373.1 mouse_genomes_project 6 138558335 138659485 - Gm44293 antisense antisense MGP_129S1SvImJ_T0078651.1 MGP_129S1SvImJ_G0030991.1 mouse_genomes_project 6 88735339 88741016 - MGP_129S1SvImJ_P0078651 Gkn3 protein_coding protein_coding MGP_129S1SvImJ_T0076369.1 MGP_129S1SvImJ_G0030469.1 mouse_genomes_project 6 14549706 14593342 + MGP_129S1SvImJ_P0076369 Cav1 protein_coding protein_coding MGP_129S1SvImJ_T0076370.1 MGP_129S1SvImJ_G0030469.1 mouse_genomes_project 6 14549716 14592447 + MGP_129S1SvImJ_P0076370 Cav1 protein_coding protein_coding MGP_129S1SvImJ_T0076371.1 MGP_129S1SvImJ_G0030469.1 mouse_genomes_project 6 14549781 14591314 + MGP_129S1SvImJ_P0076371 Cav1 protein_coding protein_coding MGP_129S1SvImJ_T0076372.1 MGP_129S1SvImJ_G0030469.1 mouse_genomes_project 6 14549782 14577330 + Cav1 protein_coding processed_transcript MGP_129S1SvImJ_T0076373.1 MGP_129S1SvImJ_G0030469.1 mouse_genomes_project 6 14549782 14591369 + MGP_129S1SvImJ_P0076373 Cav1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076374.1 MGP_129S1SvImJ_G0030469.1 mouse_genomes_project 6 14549794 14551561 + MGP_129S1SvImJ_P0076374 Cav1 protein_coding protein_coding MGP_129S1SvImJ_T0076375.1 MGP_129S1SvImJ_G0030469.1 mouse_genomes_project 6 14550405 14591171 + MGP_129S1SvImJ_P0076375 Cav1 protein_coding protein_coding MGP_129S1SvImJ_T0076376.1 MGP_129S1SvImJ_G0030469.1 mouse_genomes_project 6 14550635 14591537 + MGP_129S1SvImJ_P0076376 Cav1 protein_coding protein_coding MGP_129S1SvImJ_T0076377.1 MGP_129S1SvImJ_G0030469.1 mouse_genomes_project 6 14550997 14593470 + MGP_129S1SvImJ_P0076377 Cav1 protein_coding protein_coding MGP_129S1SvImJ_T0076378.1 MGP_129S1SvImJ_G0030469.1 mouse_genomes_project 6 14551080 14577321 + Cav1 protein_coding processed_transcript MGP_129S1SvImJ_T0080528.1 MGP_129S1SvImJ_G0031390.1 mouse_genomes_project 6 137015391 137016309 + MGP_129S1SvImJ_P0080528 Tas2r116 protein_coding protein_coding MGP_129S1SvImJ_T0081060.1 MGP_129S1SvImJ_G0031500.1 mouse_genomes_project 6 152543312 152578133 + MGP_129S1SvImJ_P0081060 Ccdc91 protein_coding protein_coding MGP_129S1SvImJ_T0081061.1 MGP_129S1SvImJ_G0031500.1 mouse_genomes_project 6 152543355 152702148 + MGP_129S1SvImJ_P0081061 Ccdc91 protein_coding protein_coding MGP_129S1SvImJ_T0081062.1 MGP_129S1SvImJ_G0031500.1 mouse_genomes_project 6 152543475 152604679 + MGP_129S1SvImJ_P0081062 Ccdc91 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081063.1 MGP_129S1SvImJ_G0031500.1 mouse_genomes_project 6 152601981 152613434 + Ccdc91 protein_coding processed_transcript MGP_129S1SvImJ_T0015536.1 MGP_129S1SvImJ_G0013625.1 mouse_genomes_project 6 104156081 104156866 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079028.1 MGP_129S1SvImJ_G0031069.1 mouse_genomes_project 6 97924629 98474153 + MGP_129S1SvImJ_P0079028 Fam19a1 protein_coding protein_coding MGP_129S1SvImJ_T0079029.1 MGP_129S1SvImJ_G0031069.1 mouse_genomes_project 6 97924717 97944627 + Fam19a1 protein_coding processed_transcript MGP_129S1SvImJ_T0079030.1 MGP_129S1SvImJ_G0031069.1 mouse_genomes_project 6 97926128 97927397 + Fam19a1 protein_coding processed_transcript MGP_129S1SvImJ_T0079031.1 MGP_129S1SvImJ_G0031069.1 mouse_genomes_project 6 97926790 98473422 + MGP_129S1SvImJ_P0079031 Fam19a1 protein_coding protein_coding MGP_129S1SvImJ_T0102595.1 MGP_129S1SvImJ_G0040428.1 mouse_genomes_project 6 39254469 39328188 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0008770.1 MGP_129S1SvImJ_G0007086.1 mouse_genomes_project 6 145705649 145795304 + Gm30524 lincRNA lincRNA MGP_129S1SvImJ_T0008771.1 MGP_129S1SvImJ_G0007086.1 mouse_genomes_project 6 145705675 145793604 + Gm30524 lincRNA lincRNA MGP_129S1SvImJ_T0015342.1 MGP_129S1SvImJ_G0013431.1 mouse_genomes_project 6 43640863 43641566 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008801.1 MGP_129S1SvImJ_G0007108.1 mouse_genomes_project 6 154101087 154104063 + Gm26540 lincRNA lincRNA MGP_129S1SvImJ_T0102629.1 MGP_129S1SvImJ_G0040462.1 mouse_genomes_project 6 86856256 86894270 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0001994.1 MGP_129S1SvImJ_G0001907.1 mouse_genomes_project 6 44804869 44806824 + TEC TEC MGP_129S1SvImJ_T0080544.1 MGP_129S1SvImJ_G0031402.1 mouse_genomes_project 6 138266431 138515436 + MGP_129S1SvImJ_P0080544 Etv6 protein_coding protein_coding MGP_129S1SvImJ_T0080545.1 MGP_129S1SvImJ_G0031402.1 mouse_genomes_project 6 138266699 138493609 + MGP_129S1SvImJ_P0080545 Etv6 protein_coding protein_coding MGP_129S1SvImJ_T0080546.1 MGP_129S1SvImJ_G0031402.1 mouse_genomes_project 6 138377440 138515440 + MGP_129S1SvImJ_P0080546 Etv6 protein_coding protein_coding MGP_129S1SvImJ_T0080547.1 MGP_129S1SvImJ_G0031402.1 mouse_genomes_project 6 138479020 138507300 + Etv6 protein_coding retained_intron MGP_129S1SvImJ_T0080548.1 MGP_129S1SvImJ_G0031402.1 mouse_genomes_project 6 138492886 138493882 + Etv6 protein_coding processed_transcript MGP_129S1SvImJ_T0001958.1 MGP_129S1SvImJ_G0001871.1 mouse_genomes_project 6 25924834 25931838 - TEC TEC MGP_129S1SvImJ_T0001991.1 MGP_129S1SvImJ_G0001904.1 mouse_genomes_project 6 44138243 44140400 + TEC TEC MGP_129S1SvImJ_T0005149.1 MGP_129S1SvImJ_G0004396.1 mouse_genomes_project 6 152030144 152031791 - Gm44085 antisense antisense MGP_129S1SvImJ_T0015576.1 MGP_129S1SvImJ_G0013665.1 mouse_genomes_project 6 119644611 119645041 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002190.1 MGP_129S1SvImJ_G0002102.1 mouse_genomes_project 6 143202862 143203362 + TEC TEC MGP_129S1SvImJ_T0077265.1 MGP_129S1SvImJ_G0030674.1 mouse_genomes_project 6 41812988 41817294 + MGP_129S1SvImJ_P0077265 Olfr434 protein_coding protein_coding MGP_129S1SvImJ_T0077266.1 MGP_129S1SvImJ_G0030674.1 mouse_genomes_project 6 41816795 41817851 + MGP_129S1SvImJ_P0077266 Olfr434 protein_coding protein_coding MGP_129S1SvImJ_T0018307.1 MGP_129S1SvImJ_G0015635.1 mouse_genomes_project 6 56984840 57145434 + processed_transcript processed_transcript MGP_129S1SvImJ_T0002098.1 MGP_129S1SvImJ_G0002011.1 mouse_genomes_project 6 91826286 91829402 + TEC TEC MGP_129S1SvImJ_T0001954.1 MGP_129S1SvImJ_G0001867.1 mouse_genomes_project 6 20788114 20790369 + TEC TEC MGP_129S1SvImJ_T0100006.1 MGP_129S1SvImJ_G0038073.1 mouse_genomes_project 6 76926935 76927096 - Gm22283 snRNA snRNA MGP_129S1SvImJ_T0079210.1 MGP_129S1SvImJ_G0031105.1 mouse_genomes_project 6 114707983 114767825 + MGP_129S1SvImJ_P0079210 Lmcd1 protein_coding protein_coding MGP_129S1SvImJ_T0079278.1 MGP_129S1SvImJ_G0031116.1 mouse_genomes_project 6 115811443 115831697 + MGP_129S1SvImJ_P0079278 Brpf1 protein_coding protein_coding MGP_129S1SvImJ_T0079279.1 MGP_129S1SvImJ_G0031116.1 mouse_genomes_project 6 115811472 115831542 + MGP_129S1SvImJ_P0079279 Brpf1 protein_coding protein_coding MGP_129S1SvImJ_T0079280.1 MGP_129S1SvImJ_G0031116.1 mouse_genomes_project 6 115811498 115831700 + MGP_129S1SvImJ_P0079280 Brpf1 protein_coding protein_coding MGP_129S1SvImJ_T0079281.1 MGP_129S1SvImJ_G0031116.1 mouse_genomes_project 6 115811498 115831561 + MGP_129S1SvImJ_P0079281 Brpf1 protein_coding protein_coding MGP_129S1SvImJ_T0079282.1 MGP_129S1SvImJ_G0031116.1 mouse_genomes_project 6 115811530 115831681 + MGP_129S1SvImJ_P0079282 Brpf1 protein_coding protein_coding MGP_129S1SvImJ_T0079283.1 MGP_129S1SvImJ_G0031116.1 mouse_genomes_project 6 115811619 115831463 + MGP_129S1SvImJ_P0079283 Brpf1 protein_coding protein_coding MGP_129S1SvImJ_T0079284.1 MGP_129S1SvImJ_G0031116.1 mouse_genomes_project 6 115811735 115831562 + MGP_129S1SvImJ_P0079284 Brpf1 protein_coding protein_coding MGP_129S1SvImJ_T0079285.1 MGP_129S1SvImJ_G0031116.1 mouse_genomes_project 6 115823593 115824889 + Brpf1 protein_coding retained_intron MGP_129S1SvImJ_T0079286.1 MGP_129S1SvImJ_G0031116.1 mouse_genomes_project 6 115827233 115829146 + Brpf1 protein_coding retained_intron MGP_129S1SvImJ_T0079287.1 MGP_129S1SvImJ_G0031116.1 mouse_genomes_project 6 115827391 115831542 + Brpf1 protein_coding retained_intron MGP_129S1SvImJ_T0102642.1 MGP_129S1SvImJ_G0040475.1 mouse_genomes_project 6 127408550 127441071 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015268.1 MGP_129S1SvImJ_G0013357.1 mouse_genomes_project 6 7148245 7149308 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011638.1 MGP_129S1SvImJ_G0009754.1 mouse_genomes_project 6 3736682 3736862 + Gm27699 misc_RNA misc_RNA MGP_129S1SvImJ_T0002760.1 MGP_129S1SvImJ_G0002635.1 mouse_genomes_project 6 39745108 39745372 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0015643.1 MGP_129S1SvImJ_G0013732.1 mouse_genomes_project 6 135371341 135374887 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015547.1 MGP_129S1SvImJ_G0013636.1 mouse_genomes_project 6 110159942 110160554 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076250.1 MGP_129S1SvImJ_G0030447.1 mouse_genomes_project 6 5103856 5143773 + MGP_129S1SvImJ_P0076250 Mios protein_coding protein_coding MGP_129S1SvImJ_T0076251.1 MGP_129S1SvImJ_G0030447.1 mouse_genomes_project 6 5134110 5143767 + Mios protein_coding retained_intron MGP_129S1SvImJ_T0076252.1 MGP_129S1SvImJ_G0030447.1 mouse_genomes_project 6 5136980 5143767 + Mios protein_coding retained_intron MGP_129S1SvImJ_T0011693.1 MGP_129S1SvImJ_G0009809.1 mouse_genomes_project 6 146701937 146702152 - Gm22036 misc_RNA misc_RNA MGP_129S1SvImJ_T0005026.1 MGP_129S1SvImJ_G0004305.1 mouse_genomes_project 6 87344175 87346896 - Gm44089 antisense antisense MGP_129S1SvImJ_T0008507.1 MGP_129S1SvImJ_G0006894.1 mouse_genomes_project 6 3363961 3396638 - Gm20617 lincRNA lincRNA MGP_129S1SvImJ_T0008508.1 MGP_129S1SvImJ_G0006894.1 mouse_genomes_project 6 3364365 3396803 - Gm20617 lincRNA lincRNA MGP_129S1SvImJ_T0079443.1 MGP_129S1SvImJ_G0031144.1 mouse_genomes_project 6 117598223 117632989 - MGP_129S1SvImJ_P0079443 Tamm41 protein_coding protein_coding MGP_129S1SvImJ_T0079444.1 MGP_129S1SvImJ_G0031144.1 mouse_genomes_project 6 117598230 117606326 - Tamm41 protein_coding retained_intron MGP_129S1SvImJ_T0079445.1 MGP_129S1SvImJ_G0031144.1 mouse_genomes_project 6 117601981 117610164 - Tamm41 protein_coding retained_intron MGP_129S1SvImJ_T0079446.1 MGP_129S1SvImJ_G0031144.1 mouse_genomes_project 6 117604633 117627383 - MGP_129S1SvImJ_P0079446 Tamm41 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079447.1 MGP_129S1SvImJ_G0031144.1 mouse_genomes_project 6 117606005 117632968 - MGP_129S1SvImJ_P0079447 Tamm41 protein_coding protein_coding MGP_129S1SvImJ_T0079448.1 MGP_129S1SvImJ_G0031144.1 mouse_genomes_project 6 117609991 117632938 - MGP_129S1SvImJ_P0079448 Tamm41 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079449.1 MGP_129S1SvImJ_G0031144.1 mouse_genomes_project 6 117619839 117632989 - Tamm41 protein_coding retained_intron MGP_129S1SvImJ_T0079450.1 MGP_129S1SvImJ_G0031144.1 mouse_genomes_project 6 117626396 117627384 - Tamm41 protein_coding processed_transcript MGP_129S1SvImJ_T0015686.1 MGP_129S1SvImJ_G0013775.1 mouse_genomes_project 6 154007241 154007412 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015265.1 MGP_129S1SvImJ_G0013354.1 mouse_genomes_project 6 5312344 5314139 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008772.1 MGP_129S1SvImJ_G0007087.1 mouse_genomes_project 6 146649024 146659139 + Gm44244 lincRNA lincRNA MGP_129S1SvImJ_T0080854.1 MGP_129S1SvImJ_G0031463.1 mouse_genomes_project 6 147176327 147191438 + MGP_129S1SvImJ_P0080854 Golt1b protein_coding protein_coding MGP_129S1SvImJ_T0080855.1 MGP_129S1SvImJ_G0031463.1 mouse_genomes_project 6 147176359 147189290 + Golt1b protein_coding processed_transcript MGP_129S1SvImJ_T0080774.1 MGP_129S1SvImJ_G0031447.1 mouse_genomes_project 6 144713078 144713985 + Capza3 protein_coding processed_transcript MGP_129S1SvImJ_T0080775.1 MGP_129S1SvImJ_G0031447.1 mouse_genomes_project 6 144713383 144714605 + MGP_129S1SvImJ_P0080775 Capza3 protein_coding protein_coding MGP_129S1SvImJ_T0008773.1 MGP_129S1SvImJ_G0007088.1 mouse_genomes_project 6 147794535 147796529 + A930014E10Rik lincRNA lincRNA MGP_129S1SvImJ_T0100018.1 MGP_129S1SvImJ_G0038085.1 mouse_genomes_project 6 114960731 114960834 + Gm27944 snRNA snRNA MGP_129S1SvImJ_T0015664.1 MGP_129S1SvImJ_G0013753.1 mouse_genomes_project 6 143481518 143482122 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079478.1 MGP_129S1SvImJ_G0031152.1 mouse_genomes_project 6 118248780 118266654 - Raf1 protein_coding retained_intron MGP_129S1SvImJ_T0079479.1 MGP_129S1SvImJ_G0031152.1 mouse_genomes_project 6 118249282 118312604 - MGP_129S1SvImJ_P0079479 Raf1 protein_coding protein_coding MGP_129S1SvImJ_T0079480.1 MGP_129S1SvImJ_G0031152.1 mouse_genomes_project 6 118249282 118313275 - MGP_129S1SvImJ_P0079480 Raf1 protein_coding protein_coding MGP_129S1SvImJ_T0079481.1 MGP_129S1SvImJ_G0031152.1 mouse_genomes_project 6 118249310 118252539 - MGP_129S1SvImJ_P0079481 Raf1 protein_coding protein_coding MGP_129S1SvImJ_T0079482.1 MGP_129S1SvImJ_G0031152.1 mouse_genomes_project 6 118249954 118251032 - Raf1 protein_coding retained_intron MGP_129S1SvImJ_T0079483.1 MGP_129S1SvImJ_G0031152.1 mouse_genomes_project 6 118250307 118254258 - MGP_129S1SvImJ_P0079483 Raf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079484.1 MGP_129S1SvImJ_G0031152.1 mouse_genomes_project 6 118250978 118262759 - Raf1 protein_coding retained_intron MGP_129S1SvImJ_T0079485.1 MGP_129S1SvImJ_G0031152.1 mouse_genomes_project 6 118252529 118257743 - Raf1 protein_coding retained_intron MGP_129S1SvImJ_T0079486.1 MGP_129S1SvImJ_G0031152.1 mouse_genomes_project 6 118252539 118257781 - Raf1 protein_coding retained_intron MGP_129S1SvImJ_T0079487.1 MGP_129S1SvImJ_G0031152.1 mouse_genomes_project 6 118254236 118265028 - MGP_129S1SvImJ_P0079487 Raf1 protein_coding protein_coding MGP_129S1SvImJ_T0079488.1 MGP_129S1SvImJ_G0031152.1 mouse_genomes_project 6 118262230 118313275 - Raf1 protein_coding retained_intron MGP_129S1SvImJ_T0002016.1 MGP_129S1SvImJ_G0001929.1 mouse_genomes_project 6 56405521 56408506 - TEC TEC MGP_129S1SvImJ_T0077764.1 MGP_129S1SvImJ_G0030801.1 mouse_genomes_project 6 57102580 57181692 + MGP_129S1SvImJ_P0077764 protein_coding protein_coding MGP_129S1SvImJ_T0077765.1 MGP_129S1SvImJ_G0030801.1 mouse_genomes_project 6 57102588 57105980 + MGP_129S1SvImJ_P0077765 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077766.1 MGP_129S1SvImJ_G0030801.1 mouse_genomes_project 6 57125438 57145587 + protein_coding retained_intron MGP_129S1SvImJ_T0077767.1 MGP_129S1SvImJ_G0030801.1 mouse_genomes_project 6 57127880 57132193 + protein_coding retained_intron MGP_129S1SvImJ_T0077768.1 MGP_129S1SvImJ_G0030801.1 mouse_genomes_project 6 57128733 57139014 + protein_coding retained_intron MGP_129S1SvImJ_T0077769.1 MGP_129S1SvImJ_G0030801.1 mouse_genomes_project 6 57132130 57140270 + protein_coding retained_intron MGP_129S1SvImJ_T0077895.1 MGP_129S1SvImJ_G0030838.1 mouse_genomes_project 6 66719725 66769129 - MGP_129S1SvImJ_P0077895 protein_coding protein_coding MGP_129S1SvImJ_T0018304.1 MGP_129S1SvImJ_G0015634.1 mouse_genomes_project 6 53615232 53781973 - 9130019P16Rik processed_transcript antisense MGP_129S1SvImJ_T0018305.1 MGP_129S1SvImJ_G0015634.1 mouse_genomes_project 6 53648774 53674797 - 9130019P16Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018306.1 MGP_129S1SvImJ_G0015634.1 mouse_genomes_project 6 53776349 53781307 - 9130019P16Rik processed_transcript lincRNA MGP_129S1SvImJ_T0078906.1 MGP_129S1SvImJ_G0031044.1 mouse_genomes_project 6 92799753 92859704 + MGP_129S1SvImJ_P0078906 Fbln2 protein_coding protein_coding MGP_129S1SvImJ_T0078907.1 MGP_129S1SvImJ_G0031044.1 mouse_genomes_project 6 92799753 92859705 + MGP_129S1SvImJ_P0078907 Fbln2 protein_coding protein_coding MGP_129S1SvImJ_T0078908.1 MGP_129S1SvImJ_G0031044.1 mouse_genomes_project 6 92800120 92820421 + MGP_129S1SvImJ_P0078908 Fbln2 protein_coding protein_coding MGP_129S1SvImJ_T0078909.1 MGP_129S1SvImJ_G0031044.1 mouse_genomes_project 6 92800122 92820600 + MGP_129S1SvImJ_P0078909 Fbln2 protein_coding protein_coding MGP_129S1SvImJ_T0078910.1 MGP_129S1SvImJ_G0031044.1 mouse_genomes_project 6 92800125 92801539 + Fbln2 protein_coding processed_transcript MGP_129S1SvImJ_T0078911.1 MGP_129S1SvImJ_G0031044.1 mouse_genomes_project 6 92800129 92820620 + MGP_129S1SvImJ_P0078911 Fbln2 protein_coding protein_coding MGP_129S1SvImJ_T0078912.1 MGP_129S1SvImJ_G0031044.1 mouse_genomes_project 6 92843231 92845006 + Fbln2 protein_coding retained_intron MGP_129S1SvImJ_T0078913.1 MGP_129S1SvImJ_G0031044.1 mouse_genomes_project 6 92843634 92850595 + Fbln2 protein_coding retained_intron MGP_129S1SvImJ_T0078914.1 MGP_129S1SvImJ_G0031044.1 mouse_genomes_project 6 92853044 92859593 + Fbln2 protein_coding retained_intron MGP_129S1SvImJ_T0005022.1 MGP_129S1SvImJ_G0004301.1 mouse_genomes_project 6 85065095 85068313 - Gm43918 antisense antisense MGP_129S1SvImJ_T0002073.1 MGP_129S1SvImJ_G0001986.1 mouse_genomes_project 6 87969434 87971789 - TEC TEC MGP_129S1SvImJ_T0015566.1 MGP_129S1SvImJ_G0013655.1 mouse_genomes_project 6 116622552 116622604 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015380.1 MGP_129S1SvImJ_G0013469.1 mouse_genomes_project 6 57642527 57643699 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015515.1 MGP_129S1SvImJ_G0013604.1 mouse_genomes_project 6 96097249 96097640 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005138.1 MGP_129S1SvImJ_G0004386.1 mouse_genomes_project 6 148913636 148915507 + Sox5os1 antisense antisense MGP_129S1SvImJ_T0101923.1 MGP_129S1SvImJ_G0039829.1 mouse_genomes_project 6 41641836 41691872 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101924.1 MGP_129S1SvImJ_G0039829.1 mouse_genomes_project 6 41690722 41691637 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0076501.1 MGP_129S1SvImJ_G0030492.1 mouse_genomes_project 6 21655231 21740905 - MGP_129S1SvImJ_P0076501 Slc13a1 protein_coding protein_coding MGP_129S1SvImJ_T0076502.1 MGP_129S1SvImJ_G0030492.1 mouse_genomes_project 6 21655498 21675418 - Slc13a1 protein_coding processed_transcript MGP_129S1SvImJ_T0076503.1 MGP_129S1SvImJ_G0030492.1 mouse_genomes_project 6 21655913 21740877 - MGP_129S1SvImJ_P0076503 Slc13a1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0076504.1 MGP_129S1SvImJ_G0030492.1 mouse_genomes_project 6 21672135 21675415 - Slc13a1 protein_coding retained_intron MGP_129S1SvImJ_T0076505.1 MGP_129S1SvImJ_G0030492.1 mouse_genomes_project 6 21701669 21740903 - Slc13a1 protein_coding retained_intron MGP_129S1SvImJ_T0079104.1 MGP_129S1SvImJ_G0031081.1 mouse_genomes_project 6 101192218 101630959 - MGP_129S1SvImJ_P0079104 Gm20696 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079107.1 MGP_129S1SvImJ_G0031081.1 mouse_genomes_project 6 101379657 101391831 - Gm20696 protein_coding retained_intron MGP_129S1SvImJ_T0079108.1 MGP_129S1SvImJ_G0031081.1 mouse_genomes_project 6 101379688 101593887 - Gm20696 protein_coding retained_intron MGP_129S1SvImJ_T0079851.1 MGP_129S1SvImJ_G0031216.1 mouse_genomes_project 6 124245006 124283122 + MGP_129S1SvImJ_P0079851 Slc6a13 protein_coding protein_coding MGP_129S1SvImJ_T0079852.1 MGP_129S1SvImJ_G0031216.1 mouse_genomes_project 6 124245068 124278979 + Slc6a13 protein_coding retained_intron MGP_129S1SvImJ_T0079853.1 MGP_129S1SvImJ_G0031216.1 mouse_genomes_project 6 124245068 124248080 + Slc6a13 protein_coding retained_intron MGP_129S1SvImJ_T0079854.1 MGP_129S1SvImJ_G0031216.1 mouse_genomes_project 6 124245561 124269732 + MGP_129S1SvImJ_P0079854 Slc6a13 protein_coding protein_coding MGP_129S1SvImJ_T0080103.1 MGP_129S1SvImJ_G0031275.1 mouse_genomes_project 6 128175214 128201064 - MGP_129S1SvImJ_P0080103 Cd4 protein_coding protein_coding MGP_129S1SvImJ_T0080104.1 MGP_129S1SvImJ_G0031275.1 mouse_genomes_project 6 128177166 128183116 - Cd4 protein_coding processed_transcript MGP_129S1SvImJ_T0080105.1 MGP_129S1SvImJ_G0031275.1 mouse_genomes_project 6 128177266 128183333 - Cd4 protein_coding processed_transcript MGP_129S1SvImJ_T0080106.1 MGP_129S1SvImJ_G0031275.1 mouse_genomes_project 6 128177871 128201042 - Cd4 protein_coding retained_intron MGP_129S1SvImJ_T0080107.1 MGP_129S1SvImJ_G0031275.1 mouse_genomes_project 6 128191583 128201043 - Cd4 protein_coding retained_intron MGP_129S1SvImJ_T0079608.1 MGP_129S1SvImJ_G0031177.1 mouse_genomes_project 6 119868253 119874780 + MGP_129S1SvImJ_P0079608 Cxcl12 protein_coding protein_coding MGP_129S1SvImJ_T0079609.1 MGP_129S1SvImJ_G0031177.1 mouse_genomes_project 6 119868292 119881077 + MGP_129S1SvImJ_P0079609 Cxcl12 protein_coding protein_coding MGP_129S1SvImJ_T0079610.1 MGP_129S1SvImJ_G0031177.1 mouse_genomes_project 6 119868295 119875838 + Cxcl12 protein_coding retained_intron MGP_129S1SvImJ_T0079611.1 MGP_129S1SvImJ_G0031177.1 mouse_genomes_project 6 119868295 119881078 + MGP_129S1SvImJ_P0079611 Cxcl12 protein_coding protein_coding MGP_129S1SvImJ_T0077560.1 MGP_129S1SvImJ_G0030744.1 mouse_genomes_project 6 51441542 51444385 - MGP_129S1SvImJ_P0077560 Hoxa5 protein_coding protein_coding MGP_129S1SvImJ_T0077760.1 MGP_129S1SvImJ_G0030799.1 mouse_genomes_project 6 56932312 56933323 + MGP_129S1SvImJ_P0077760 protein_coding protein_coding MGP_129S1SvImJ_T0078838.1 MGP_129S1SvImJ_G0031026.1 mouse_genomes_project 6 91405357 91415935 - MGP_129S1SvImJ_P0078838 Vmn1r45 protein_coding protein_coding MGP_129S1SvImJ_T0076764.1 MGP_129S1SvImJ_G0030541.1 mouse_genomes_project 6 28512454 28533253 + MGP_129S1SvImJ_P0076764 Cpa5 protein_coding protein_coding MGP_129S1SvImJ_T0076765.1 MGP_129S1SvImJ_G0030541.1 mouse_genomes_project 6 28512495 28533028 + MGP_129S1SvImJ_P0076765 Cpa5 protein_coding protein_coding MGP_129S1SvImJ_T0076766.1 MGP_129S1SvImJ_G0030541.1 mouse_genomes_project 6 28513632 28533251 + MGP_129S1SvImJ_P0076766 Cpa5 protein_coding protein_coding MGP_129S1SvImJ_T0076767.1 MGP_129S1SvImJ_G0030541.1 mouse_genomes_project 6 28513999 28532944 + MGP_129S1SvImJ_P0076767 Cpa5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0102612.1 MGP_129S1SvImJ_G0040445.1 mouse_genomes_project 6 56940485 56941604 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015675.1 MGP_129S1SvImJ_G0013764.1 mouse_genomes_project 6 147960557 147961026 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015393.1 MGP_129S1SvImJ_G0013482.1 mouse_genomes_project 6 62122660 62124196 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004982.1 MGP_129S1SvImJ_G0004274.1 mouse_genomes_project 6 53147692 53197790 + Gm43938 antisense antisense MGP_129S1SvImJ_T0002707.1 MGP_129S1SvImJ_G0002588.1 mouse_genomes_project 6 39638043 39638534 + MGP_129S1SvImJ_P0002707 Trbv16 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0080962.1 MGP_129S1SvImJ_G0031480.1 mouse_genomes_project 6 150361967 150624921 - MGP_129S1SvImJ_P0080962 Lmntd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080963.1 MGP_129S1SvImJ_G0031480.1 mouse_genomes_project 6 150391841 150429107 - MGP_129S1SvImJ_P0080963 Lmntd1 protein_coding protein_coding MGP_129S1SvImJ_T0080964.1 MGP_129S1SvImJ_G0031480.1 mouse_genomes_project 6 150425344 150429423 - MGP_129S1SvImJ_P0080964 Lmntd1 protein_coding protein_coding MGP_129S1SvImJ_T0080965.1 MGP_129S1SvImJ_G0031480.1 mouse_genomes_project 6 150546660 150624967 - Lmntd1 protein_coding processed_transcript MGP_129S1SvImJ_T0080966.1 MGP_129S1SvImJ_G0031480.1 mouse_genomes_project 6 150584541 150624617 - Lmntd1 protein_coding processed_transcript MGP_129S1SvImJ_T0080478.1 MGP_129S1SvImJ_G0031358.1 mouse_genomes_project 6 133370604 133391285 - MGP_129S1SvImJ_P0080478 Klri1 protein_coding protein_coding MGP_129S1SvImJ_T0080578.1 MGP_129S1SvImJ_G0031409.1 mouse_genomes_project 6 139164419 139194839 - MGP_129S1SvImJ_P0080578 Gpr19 protein_coding protein_coding MGP_129S1SvImJ_T0080579.1 MGP_129S1SvImJ_G0031409.1 mouse_genomes_project 6 139164419 139194729 - MGP_129S1SvImJ_P0080579 Gpr19 protein_coding protein_coding MGP_129S1SvImJ_T0080580.1 MGP_129S1SvImJ_G0031409.1 mouse_genomes_project 6 139164434 139194772 - MGP_129S1SvImJ_P0080580 Gpr19 protein_coding protein_coding MGP_129S1SvImJ_T0080581.1 MGP_129S1SvImJ_G0031409.1 mouse_genomes_project 6 139164483 139184639 - MGP_129S1SvImJ_P0080581 Gpr19 protein_coding protein_coding MGP_129S1SvImJ_T0080582.1 MGP_129S1SvImJ_G0031409.1 mouse_genomes_project 6 139164488 139194777 - MGP_129S1SvImJ_P0080582 Gpr19 protein_coding protein_coding MGP_129S1SvImJ_T0080583.1 MGP_129S1SvImJ_G0031409.1 mouse_genomes_project 6 139165363 139194739 - MGP_129S1SvImJ_P0080583 Gpr19 protein_coding protein_coding MGP_129S1SvImJ_T0080584.1 MGP_129S1SvImJ_G0031409.1 mouse_genomes_project 6 139165534 139194729 - MGP_129S1SvImJ_P0080584 Gpr19 protein_coding protein_coding MGP_129S1SvImJ_T0080585.1 MGP_129S1SvImJ_G0031409.1 mouse_genomes_project 6 139165575 139184575 - MGP_129S1SvImJ_P0080585 Gpr19 protein_coding protein_coding MGP_129S1SvImJ_T0080586.1 MGP_129S1SvImJ_G0031409.1 mouse_genomes_project 6 139172569 139194801 - Gpr19 protein_coding processed_transcript MGP_129S1SvImJ_T0080587.1 MGP_129S1SvImJ_G0031409.1 mouse_genomes_project 6 139183697 139194001 - Gpr19 protein_coding processed_transcript MGP_129S1SvImJ_T0080588.1 MGP_129S1SvImJ_G0031409.1 mouse_genomes_project 6 139184457 139195481 - Gpr19 protein_coding processed_transcript MGP_129S1SvImJ_T0080589.1 MGP_129S1SvImJ_G0031409.1 mouse_genomes_project 6 139193614 139194839 - Gpr19 protein_coding processed_transcript MGP_129S1SvImJ_T0001973.1 MGP_129S1SvImJ_G0001886.1 mouse_genomes_project 6 34338928 34341332 - TEC TEC MGP_129S1SvImJ_T0002009.1 MGP_129S1SvImJ_G0001922.1 mouse_genomes_project 6 51877572 51881317 - TEC TEC MGP_129S1SvImJ_T0079706.1 MGP_129S1SvImJ_G0031193.1 mouse_genomes_project 6 122140848 122217231 - MGP_129S1SvImJ_P0079706 Adipor2 protein_coding protein_coding MGP_129S1SvImJ_T0079707.1 MGP_129S1SvImJ_G0031193.1 mouse_genomes_project 6 122141465 122179669 - MGP_129S1SvImJ_P0079707 Adipor2 protein_coding protein_coding MGP_129S1SvImJ_T0079708.1 MGP_129S1SvImJ_G0031193.1 mouse_genomes_project 6 122143161 122181232 - MGP_129S1SvImJ_P0079708 Adipor2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079709.1 MGP_129S1SvImJ_G0031193.1 mouse_genomes_project 6 122145383 122217217 - Adipor2 protein_coding retained_intron MGP_129S1SvImJ_T0079710.1 MGP_129S1SvImJ_G0031193.1 mouse_genomes_project 6 122159219 122217002 - MGP_129S1SvImJ_P0079710 Adipor2 protein_coding protein_coding MGP_129S1SvImJ_T0078267.1 MGP_129S1SvImJ_G0030920.1 mouse_genomes_project 6 84122935 84126338 + MGP_129S1SvImJ_P0078267 Mogs protein_coding protein_coding MGP_129S1SvImJ_T0078268.1 MGP_129S1SvImJ_G0030920.1 mouse_genomes_project 6 84123955 84124791 + Mogs protein_coding retained_intron MGP_129S1SvImJ_T0002584.1 MGP_129S1SvImJ_G0002487.1 mouse_genomes_project 6 40041461 40041509 + MGP_129S1SvImJ_P0002584 Trbj1-2 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0005135.1 MGP_129S1SvImJ_G0004383.1 mouse_genomes_project 6 145991800 145995401 - Gm28523 antisense antisense MGP_129S1SvImJ_T0011688.1 MGP_129S1SvImJ_G0009804.1 mouse_genomes_project 6 125382929 125383178 - Gm27826 misc_RNA misc_RNA MGP_129S1SvImJ_T0101956.1 MGP_129S1SvImJ_G0039840.1 mouse_genomes_project 6 134853196 134949322 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0080629.1 MGP_129S1SvImJ_G0031420.1 mouse_genomes_project 6 140074019 140555643 - MGP_129S1SvImJ_P0080629 Grin2b protein_coding protein_coding MGP_129S1SvImJ_T0080630.1 MGP_129S1SvImJ_G0031420.1 mouse_genomes_project 6 140090396 140556007 - MGP_129S1SvImJ_P0080630 Grin2b protein_coding protein_coding MGP_129S1SvImJ_T0080631.1 MGP_129S1SvImJ_G0031420.1 mouse_genomes_project 6 140235491 140556007 - MGP_129S1SvImJ_P0080631 Grin2b protein_coding protein_coding MGP_129S1SvImJ_T0080632.1 MGP_129S1SvImJ_G0031420.1 mouse_genomes_project 6 140421021 140554405 - MGP_129S1SvImJ_P0080632 Grin2b protein_coding protein_coding MGP_129S1SvImJ_T0080633.1 MGP_129S1SvImJ_G0031420.1 mouse_genomes_project 6 140421024 140556007 - MGP_129S1SvImJ_P0080633 Grin2b protein_coding protein_coding MGP_129S1SvImJ_T0080634.1 MGP_129S1SvImJ_G0031420.1 mouse_genomes_project 6 140421024 140556007 - MGP_129S1SvImJ_P0080634 Grin2b protein_coding protein_coding MGP_129S1SvImJ_T0080635.1 MGP_129S1SvImJ_G0031420.1 mouse_genomes_project 6 140554278 140555894 - Grin2b protein_coding processed_transcript MGP_129S1SvImJ_T0080238.1 MGP_129S1SvImJ_G0031298.1 mouse_genomes_project 6 128819270 128858913 - MGP_129S1SvImJ_P0080238 Cd9 protein_coding protein_coding MGP_129S1SvImJ_T0080239.1 MGP_129S1SvImJ_G0031298.1 mouse_genomes_project 6 128819593 128840228 - Cd9 protein_coding processed_transcript MGP_129S1SvImJ_T0080240.1 MGP_129S1SvImJ_G0031298.1 mouse_genomes_project 6 128821120 128822496 - Cd9 protein_coding retained_intron MGP_129S1SvImJ_T0015501.1 MGP_129S1SvImJ_G0013590.1 mouse_genomes_project 6 87182776 87183553 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000208.1 MGP_129S1SvImJ_G0000161.1 mouse_genomes_project 6 70344274 70344787 - MGP_129S1SvImJ_P0000208 Igkv18-36 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000209.1 MGP_129S1SvImJ_G0000161.1 mouse_genomes_project 6 70344274 70344787 - MGP_129S1SvImJ_P0000209 Igkv18-36 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0015363.1 MGP_129S1SvImJ_G0013452.1 mouse_genomes_project 6 48446878 48447702 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101228.1 MGP_129S1SvImJ_G0039295.1 mouse_genomes_project 6 10185012 10185141 + Gm24985 snoRNA snoRNA MGP_129S1SvImJ_T0015674.1 MGP_129S1SvImJ_G0013763.1 mouse_genomes_project 6 146911195 146912265 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004946.1 MGP_129S1SvImJ_G0004248.1 mouse_genomes_project 6 31055070 31059825 + Gm14540 antisense antisense MGP_129S1SvImJ_T0101261.1 MGP_129S1SvImJ_G0039328.1 mouse_genomes_project 6 74974491 74974623 + Gm26179 snoRNA snoRNA MGP_129S1SvImJ_T0101297.1 MGP_129S1SvImJ_G0039364.1 mouse_genomes_project 6 150464726 150464841 + Gm25373 snoRNA snoRNA MGP_129S1SvImJ_T0079054.1 MGP_129S1SvImJ_G0031077.1 mouse_genomes_project 6 99118395 99330730 - MGP_129S1SvImJ_P0079054 Frmd4b protein_coding protein_coding MGP_129S1SvImJ_T0079055.1 MGP_129S1SvImJ_G0031077.1 mouse_genomes_project 6 99118564 99122796 - Frmd4b protein_coding retained_intron MGP_129S1SvImJ_T0079056.1 MGP_129S1SvImJ_G0031077.1 mouse_genomes_project 6 99118614 99144926 - Frmd4b protein_coding processed_transcript MGP_129S1SvImJ_T0079057.1 MGP_129S1SvImJ_G0031077.1 mouse_genomes_project 6 99118620 99300209 - MGP_129S1SvImJ_P0079057 Frmd4b protein_coding protein_coding MGP_129S1SvImJ_T0079058.1 MGP_129S1SvImJ_G0031077.1 mouse_genomes_project 6 99138733 99144976 - Frmd4b protein_coding retained_intron MGP_129S1SvImJ_T0079059.1 MGP_129S1SvImJ_G0031077.1 mouse_genomes_project 6 99139657 99156699 - Frmd4b protein_coding processed_transcript MGP_129S1SvImJ_T0079060.1 MGP_129S1SvImJ_G0031077.1 mouse_genomes_project 6 99140224 99189133 - Frmd4b protein_coding retained_intron MGP_129S1SvImJ_T0079061.1 MGP_129S1SvImJ_G0031077.1 mouse_genomes_project 6 99156216 99230322 - Frmd4b protein_coding processed_transcript MGP_129S1SvImJ_T0079062.1 MGP_129S1SvImJ_G0031077.1 mouse_genomes_project 6 99156874 99330779 - Frmd4b protein_coding processed_transcript MGP_129S1SvImJ_T0079063.1 MGP_129S1SvImJ_G0031077.1 mouse_genomes_project 6 99185888 99465183 - Frmd4b protein_coding retained_intron MGP_129S1SvImJ_T0079064.1 MGP_129S1SvImJ_G0031077.1 mouse_genomes_project 6 99229374 99230290 - Frmd4b protein_coding retained_intron MGP_129S1SvImJ_T0079065.1 MGP_129S1SvImJ_G0031077.1 mouse_genomes_project 6 99229842 99268074 - MGP_129S1SvImJ_P0079065 Frmd4b protein_coding protein_coding MGP_129S1SvImJ_T0078412.1 MGP_129S1SvImJ_G0030944.1 mouse_genomes_project 6 85064787 85295811 + MGP_129S1SvImJ_P0078412 Dysf protein_coding protein_coding MGP_129S1SvImJ_T0078413.1 MGP_129S1SvImJ_G0030944.1 mouse_genomes_project 6 85064899 85295647 + MGP_129S1SvImJ_P0078413 Dysf protein_coding protein_coding MGP_129S1SvImJ_T0078414.1 MGP_129S1SvImJ_G0030944.1 mouse_genomes_project 6 85064899 85295647 + MGP_129S1SvImJ_P0078414 Dysf protein_coding protein_coding MGP_129S1SvImJ_T0078415.1 MGP_129S1SvImJ_G0030944.1 mouse_genomes_project 6 85064899 85295647 + MGP_129S1SvImJ_P0078415 Dysf protein_coding protein_coding MGP_129S1SvImJ_T0078416.1 MGP_129S1SvImJ_G0030944.1 mouse_genomes_project 6 85064964 85295647 + MGP_129S1SvImJ_P0078416 Dysf protein_coding protein_coding MGP_129S1SvImJ_T0078417.1 MGP_129S1SvImJ_G0030944.1 mouse_genomes_project 6 85065112 85295810 + MGP_129S1SvImJ_P0078417 Dysf protein_coding protein_coding MGP_129S1SvImJ_T0078418.1 MGP_129S1SvImJ_G0030944.1 mouse_genomes_project 6 85077281 85295608 + MGP_129S1SvImJ_P0078418 Dysf protein_coding protein_coding MGP_129S1SvImJ_T0078419.1 MGP_129S1SvImJ_G0030944.1 mouse_genomes_project 6 85077281 85295810 + MGP_129S1SvImJ_P0078419 Dysf protein_coding protein_coding MGP_129S1SvImJ_T0078420.1 MGP_129S1SvImJ_G0030944.1 mouse_genomes_project 6 85077281 85295608 + MGP_129S1SvImJ_P0078420 Dysf protein_coding protein_coding MGP_129S1SvImJ_T0078421.1 MGP_129S1SvImJ_G0030944.1 mouse_genomes_project 6 85077281 85295608 + MGP_129S1SvImJ_P0078421 Dysf protein_coding protein_coding MGP_129S1SvImJ_T0078422.1 MGP_129S1SvImJ_G0030944.1 mouse_genomes_project 6 85077282 85295811 + MGP_129S1SvImJ_P0078422 Dysf protein_coding protein_coding MGP_129S1SvImJ_T0078423.1 MGP_129S1SvImJ_G0030944.1 mouse_genomes_project 6 85077285 85295810 + MGP_129S1SvImJ_P0078423 Dysf protein_coding protein_coding MGP_129S1SvImJ_T0078424.1 MGP_129S1SvImJ_G0030944.1 mouse_genomes_project 6 85176146 85184049 + Dysf protein_coding processed_transcript MGP_129S1SvImJ_T0078425.1 MGP_129S1SvImJ_G0030944.1 mouse_genomes_project 6 85177324 85188729 + Dysf protein_coding retained_intron MGP_129S1SvImJ_T0078426.1 MGP_129S1SvImJ_G0030944.1 mouse_genomes_project 6 85219869 85225531 + Dysf protein_coding processed_transcript MGP_129S1SvImJ_T0078427.1 MGP_129S1SvImJ_G0030944.1 mouse_genomes_project 6 85295234 85295792 + Dysf protein_coding processed_transcript MGP_129S1SvImJ_T0078457.1 MGP_129S1SvImJ_G0030952.1 mouse_genomes_project 6 86589393 86595480 + MGP_129S1SvImJ_P0078457 Noto protein_coding protein_coding MGP_129S1SvImJ_T0078458.1 MGP_129S1SvImJ_G0030952.1 mouse_genomes_project 6 86589575 86594879 + MGP_129S1SvImJ_P0078458 Noto protein_coding protein_coding MGP_129S1SvImJ_T0015605.1 MGP_129S1SvImJ_G0013694.1 mouse_genomes_project 6 127521118 127522052 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002105.1 MGP_129S1SvImJ_G0002018.1 mouse_genomes_project 6 93297355 93299031 - TEC TEC MGP_129S1SvImJ_T0080278.1 MGP_129S1SvImJ_G0031308.1 mouse_genomes_project 6 130397808 130415557 - MGP_129S1SvImJ_P0080278 Rad51ap1 protein_coding protein_coding MGP_129S1SvImJ_T0080279.1 MGP_129S1SvImJ_G0031308.1 mouse_genomes_project 6 130398173 130400588 - Rad51ap1 protein_coding retained_intron MGP_129S1SvImJ_T0080280.1 MGP_129S1SvImJ_G0031308.1 mouse_genomes_project 6 130398173 130415557 - MGP_129S1SvImJ_P0080280 Rad51ap1 protein_coding protein_coding MGP_129S1SvImJ_T0080281.1 MGP_129S1SvImJ_G0031308.1 mouse_genomes_project 6 130398936 130400494 - Rad51ap1 protein_coding processed_transcript MGP_129S1SvImJ_T0080282.1 MGP_129S1SvImJ_G0031308.1 mouse_genomes_project 6 130399747 130403029 - Rad51ap1 protein_coding retained_intron MGP_129S1SvImJ_T0080283.1 MGP_129S1SvImJ_G0031308.1 mouse_genomes_project 6 130401120 130415541 - MGP_129S1SvImJ_P0080283 Rad51ap1 protein_coding protein_coding MGP_129S1SvImJ_T0080284.1 MGP_129S1SvImJ_G0031308.1 mouse_genomes_project 6 130401136 130402867 - Rad51ap1 protein_coding retained_intron MGP_129S1SvImJ_T0080285.1 MGP_129S1SvImJ_G0031308.1 mouse_genomes_project 6 130402403 130415516 - Rad51ap1 protein_coding processed_transcript MGP_129S1SvImJ_T0080286.1 MGP_129S1SvImJ_G0031308.1 mouse_genomes_project 6 130402865 130415545 - MGP_129S1SvImJ_P0080286 Rad51ap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080287.1 MGP_129S1SvImJ_G0031308.1 mouse_genomes_project 6 130403436 130415557 - Rad51ap1 protein_coding retained_intron MGP_129S1SvImJ_T0015433.1 MGP_129S1SvImJ_G0013522.1 mouse_genomes_project 6 67580740 67581996 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004965.1 MGP_129S1SvImJ_G0004264.1 mouse_genomes_project 6 41894059 41895373 - Gm44731 antisense antisense MGP_129S1SvImJ_T0005053.1 MGP_129S1SvImJ_G0004320.1 mouse_genomes_project 6 92143204 92146456 - Gm15756 antisense antisense MGP_129S1SvImJ_T0098374.1 MGP_129S1SvImJ_G0036459.1 mouse_genomes_project 6 46344860 46345405 - pseudogene pseudogene MGP_129S1SvImJ_T0011690.1 MGP_129S1SvImJ_G0009806.1 mouse_genomes_project 6 131394168 131394467 + Gm23098 misc_RNA misc_RNA MGP_129S1SvImJ_T0001987.1 MGP_129S1SvImJ_G0001900.1 mouse_genomes_project 6 44015151 44016556 + TEC TEC MGP_129S1SvImJ_T0000306.1 MGP_129S1SvImJ_G0000248.1 mouse_genomes_project 6 68353909 68354211 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0010778.1 MGP_129S1SvImJ_G0008894.1 mouse_genomes_project 6 33653109 33653205 - Gm23053 miRNA miRNA MGP_129S1SvImJ_T0078428.1 MGP_129S1SvImJ_G0030945.1 mouse_genomes_project 6 85681365 85697980 - MGP_129S1SvImJ_P0078428 Cyp26b1 protein_coding protein_coding MGP_129S1SvImJ_T0078429.1 MGP_129S1SvImJ_G0030945.1 mouse_genomes_project 6 85684193 85697980 - MGP_129S1SvImJ_P0078429 Cyp26b1 protein_coding protein_coding MGP_129S1SvImJ_T0010837.1 MGP_129S1SvImJ_G0008953.1 mouse_genomes_project 6 140101558 140101663 + Gm22892 miRNA miRNA MGP_129S1SvImJ_T0008566.1 MGP_129S1SvImJ_G0006934.1 mouse_genomes_project 6 32030612 32039230 - Gm13853 lincRNA lincRNA MGP_129S1SvImJ_T0080523.1 MGP_129S1SvImJ_G0031385.1 mouse_genomes_project 6 136856939 136857869 + MGP_129S1SvImJ_P0080523 Tas2r124 protein_coding protein_coding MGP_129S1SvImJ_T0076824.1 MGP_129S1SvImJ_G0030552.1 mouse_genomes_project 6 30796671 30907372 - MGP_129S1SvImJ_P0076824 Chchd3 protein_coding protein_coding MGP_129S1SvImJ_T0076825.1 MGP_129S1SvImJ_G0030552.1 mouse_genomes_project 6 30797912 31078058 - MGP_129S1SvImJ_P0076825 Chchd3 protein_coding protein_coding MGP_129S1SvImJ_T0076826.1 MGP_129S1SvImJ_G0030552.1 mouse_genomes_project 6 30797919 31078034 - MGP_129S1SvImJ_P0076826 Chchd3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076827.1 MGP_129S1SvImJ_G0030552.1 mouse_genomes_project 6 30798332 30913364 - Chchd3 protein_coding processed_transcript MGP_129S1SvImJ_T0076828.1 MGP_129S1SvImJ_G0030552.1 mouse_genomes_project 6 30798337 30913321 - Chchd3 protein_coding processed_transcript MGP_129S1SvImJ_T0076829.1 MGP_129S1SvImJ_G0030552.1 mouse_genomes_project 6 30798338 30913314 - Chchd3 protein_coding processed_transcript MGP_129S1SvImJ_T0076830.1 MGP_129S1SvImJ_G0030552.1 mouse_genomes_project 6 30798349 30811950 - Chchd3 protein_coding processed_transcript MGP_129S1SvImJ_T0076831.1 MGP_129S1SvImJ_G0030552.1 mouse_genomes_project 6 30798389 30829222 - Chchd3 protein_coding processed_transcript MGP_129S1SvImJ_T0076832.1 MGP_129S1SvImJ_G0030552.1 mouse_genomes_project 6 30811945 31078035 - MGP_129S1SvImJ_P0076832 Chchd3 protein_coding protein_coding MGP_129S1SvImJ_T0076833.1 MGP_129S1SvImJ_G0030552.1 mouse_genomes_project 6 30862192 31078015 - MGP_129S1SvImJ_P0076833 Chchd3 protein_coding protein_coding MGP_129S1SvImJ_T0015488.1 MGP_129S1SvImJ_G0013577.1 mouse_genomes_project 6 84938116 84938480 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078696.1 MGP_129S1SvImJ_G0031002.1 mouse_genomes_project 6 89260725 89286921 + MGP_129S1SvImJ_P0078696 Copg1 protein_coding protein_coding MGP_129S1SvImJ_T0078697.1 MGP_129S1SvImJ_G0031002.1 mouse_genomes_project 6 89260839 89263671 + MGP_129S1SvImJ_P0078697 Copg1 protein_coding protein_coding MGP_129S1SvImJ_T0078698.1 MGP_129S1SvImJ_G0031002.1 mouse_genomes_project 6 89260851 89266719 + Copg1 protein_coding processed_transcript MGP_129S1SvImJ_T0078699.1 MGP_129S1SvImJ_G0031002.1 mouse_genomes_project 6 89260868 89267874 + Copg1 protein_coding retained_intron MGP_129S1SvImJ_T0078700.1 MGP_129S1SvImJ_G0031002.1 mouse_genomes_project 6 89266854 89275024 + Copg1 protein_coding retained_intron MGP_129S1SvImJ_T0078701.1 MGP_129S1SvImJ_G0031002.1 mouse_genomes_project 6 89268027 89269014 + Copg1 protein_coding retained_intron MGP_129S1SvImJ_T0078702.1 MGP_129S1SvImJ_G0031002.1 mouse_genomes_project 6 89268367 89277537 + Copg1 protein_coding retained_intron MGP_129S1SvImJ_T0078703.1 MGP_129S1SvImJ_G0031002.1 mouse_genomes_project 6 89268908 89285856 + Copg1 protein_coding retained_intron MGP_129S1SvImJ_T0078704.1 MGP_129S1SvImJ_G0031002.1 mouse_genomes_project 6 89270714 89275436 + Copg1 protein_coding retained_intron MGP_129S1SvImJ_T0078705.1 MGP_129S1SvImJ_G0031002.1 mouse_genomes_project 6 89282097 89283380 + Copg1 protein_coding processed_transcript MGP_129S1SvImJ_T0000222.1 MGP_129S1SvImJ_G0000172.1 mouse_genomes_project 6 70529378 70787185 - MGP_129S1SvImJ_P0000222 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0005112.1 MGP_129S1SvImJ_G0004364.1 mouse_genomes_project 6 131304064 131305424 + Gm42738 antisense antisense MGP_129S1SvImJ_T0076281.1 MGP_129S1SvImJ_G0030453.1 mouse_genomes_project 6 5890944 5894944 + Nxph1 protein_coding processed_transcript MGP_129S1SvImJ_T0076282.1 MGP_129S1SvImJ_G0030453.1 mouse_genomes_project 6 5891127 6198091 + MGP_129S1SvImJ_P0076282 Nxph1 protein_coding protein_coding MGP_129S1SvImJ_T0076283.1 MGP_129S1SvImJ_G0030453.1 mouse_genomes_project 6 5892189 6198089 + MGP_129S1SvImJ_P0076283 Nxph1 protein_coding protein_coding MGP_129S1SvImJ_T0078871.1 MGP_129S1SvImJ_G0031039.1 mouse_genomes_project 6 92018785 92100531 + Aldh1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0078872.1 MGP_129S1SvImJ_G0031039.1 mouse_genomes_project 6 92086599 92146711 + MGP_129S1SvImJ_P0078872 Aldh1l1 protein_coding protein_coding MGP_129S1SvImJ_T0078873.1 MGP_129S1SvImJ_G0031039.1 mouse_genomes_project 6 92086615 92145677 + MGP_129S1SvImJ_P0078873 Aldh1l1 protein_coding protein_coding MGP_129S1SvImJ_T0078874.1 MGP_129S1SvImJ_G0031039.1 mouse_genomes_project 6 92086653 92101106 + MGP_129S1SvImJ_P0078874 Aldh1l1 protein_coding protein_coding MGP_129S1SvImJ_T0078875.1 MGP_129S1SvImJ_G0031039.1 mouse_genomes_project 6 92086658 92145668 + MGP_129S1SvImJ_P0078875 Aldh1l1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078876.1 MGP_129S1SvImJ_G0031039.1 mouse_genomes_project 6 92108839 92112018 + Aldh1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0078877.1 MGP_129S1SvImJ_G0031039.1 mouse_genomes_project 6 92135857 92143582 + Aldh1l1 protein_coding retained_intron MGP_129S1SvImJ_T0002185.1 MGP_129S1SvImJ_G0002097.1 mouse_genomes_project 6 141261033 141261568 + TEC TEC MGP_129S1SvImJ_T0015611.1 MGP_129S1SvImJ_G0013700.1 mouse_genomes_project 6 128595780 128596078 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098624.1 MGP_129S1SvImJ_G0036709.1 mouse_genomes_project 6 114669578 114669678 - n-R5s165 rRNA rRNA MGP_129S1SvImJ_T0015506.1 MGP_129S1SvImJ_G0013595.1 mouse_genomes_project 6 93040508 93042347 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002751.1 MGP_129S1SvImJ_G0002626.1 mouse_genomes_project 6 39564496 39564786 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0077186.1 MGP_129S1SvImJ_G0030644.1 mouse_genomes_project 6 40764313 40772139 + MGP_129S1SvImJ_P0077186 Tmem139 protein_coding protein_coding MGP_129S1SvImJ_T0011672.1 MGP_129S1SvImJ_G0009788.1 mouse_genomes_project 6 51508221 51508582 + Gm27383 misc_RNA misc_RNA MGP_129S1SvImJ_T0079603.1 MGP_129S1SvImJ_G0031175.1 mouse_genomes_project 6 119339752 119341969 + MGP_129S1SvImJ_P0079603 8430408G22Rik protein_coding protein_coding MGP_129S1SvImJ_T0079604.1 MGP_129S1SvImJ_G0031175.1 mouse_genomes_project 6 119339771 119341969 + MGP_129S1SvImJ_P0079604 8430408G22Rik protein_coding protein_coding MGP_129S1SvImJ_T0079605.1 MGP_129S1SvImJ_G0031175.1 mouse_genomes_project 6 119339839 119341054 + MGP_129S1SvImJ_P0079605 8430408G22Rik protein_coding protein_coding MGP_129S1SvImJ_T0002106.1 MGP_129S1SvImJ_G0002019.1 mouse_genomes_project 6 93318768 93320576 + TEC TEC MGP_129S1SvImJ_T0018315.1 MGP_129S1SvImJ_G0015638.1 mouse_genomes_project 6 66861302 66862107 - 4930597O21Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018316.1 MGP_129S1SvImJ_G0015638.1 mouse_genomes_project 6 66861304 66864213 - 4930597O21Rik processed_transcript bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0079066.1 MGP_129S1SvImJ_G0031078.1 mouse_genomes_project 6 99667861 99883273 + MGP_129S1SvImJ_P0079066 Mitf protein_coding protein_coding MGP_129S1SvImJ_T0079067.1 MGP_129S1SvImJ_G0031078.1 mouse_genomes_project 6 99667867 99804441 + Mitf protein_coding retained_intron MGP_129S1SvImJ_T0079068.1 MGP_129S1SvImJ_G0031078.1 mouse_genomes_project 6 99667867 99886029 + MGP_129S1SvImJ_P0079068 Mitf protein_coding protein_coding MGP_129S1SvImJ_T0079069.1 MGP_129S1SvImJ_G0031078.1 mouse_genomes_project 6 99792084 99883387 + MGP_129S1SvImJ_P0079069 Mitf protein_coding protein_coding MGP_129S1SvImJ_T0079070.1 MGP_129S1SvImJ_G0031078.1 mouse_genomes_project 6 99803179 99883387 + MGP_129S1SvImJ_P0079070 Mitf protein_coding protein_coding MGP_129S1SvImJ_T0079071.1 MGP_129S1SvImJ_G0031078.1 mouse_genomes_project 6 99855705 99883387 + MGP_129S1SvImJ_P0079071 Mitf protein_coding protein_coding MGP_129S1SvImJ_T0079072.1 MGP_129S1SvImJ_G0031078.1 mouse_genomes_project 6 99855732 99883177 + MGP_129S1SvImJ_P0079072 Mitf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079073.1 MGP_129S1SvImJ_G0031078.1 mouse_genomes_project 6 99855834 99882855 + MGP_129S1SvImJ_P0079073 Mitf protein_coding protein_coding MGP_129S1SvImJ_T0079326.1 MGP_129S1SvImJ_G0031123.1 mouse_genomes_project 6 115942627 115953545 - MGP_129S1SvImJ_P0079326 Cidec protein_coding protein_coding MGP_129S1SvImJ_T0079327.1 MGP_129S1SvImJ_G0031123.1 mouse_genomes_project 6 115943552 115953575 - MGP_129S1SvImJ_P0079327 Cidec protein_coding protein_coding MGP_129S1SvImJ_T0079328.1 MGP_129S1SvImJ_G0031123.1 mouse_genomes_project 6 115950890 115953457 - MGP_129S1SvImJ_P0079328 Cidec protein_coding protein_coding MGP_129S1SvImJ_T0098762.1 MGP_129S1SvImJ_G0036847.1 mouse_genomes_project 6 128450185 128450321 + Gm23751 scaRNA scaRNA MGP_129S1SvImJ_T0011650.1 MGP_129S1SvImJ_G0009766.1 mouse_genomes_project 6 15184496 15184616 + Gm27402 misc_RNA misc_RNA MGP_129S1SvImJ_T0000310.1 MGP_129S1SvImJ_G0000252.1 mouse_genomes_project 6 68500478 68500776 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0008719.1 MGP_129S1SvImJ_G0007049.1 mouse_genomes_project 6 120198472 120203295 + Gm43983 lincRNA lincRNA MGP_129S1SvImJ_T0078265.1 MGP_129S1SvImJ_G0030919.1 mouse_genomes_project 6 84116479 84117379 + MGP_129S1SvImJ_P0078265 Mrpl53 protein_coding protein_coding MGP_129S1SvImJ_T0078266.1 MGP_129S1SvImJ_G0030919.1 mouse_genomes_project 6 84116559 84117379 + Mrpl53 protein_coding retained_intron MGP_129S1SvImJ_T0005070.1 MGP_129S1SvImJ_G0004330.1 mouse_genomes_project 6 104359730 104402505 + Gm44188 antisense antisense MGP_129S1SvImJ_T0005071.1 MGP_129S1SvImJ_G0004330.1 mouse_genomes_project 6 104359752 104432549 + Gm44188 antisense antisense MGP_129S1SvImJ_T0078538.1 MGP_129S1SvImJ_G0030972.1 mouse_genomes_project 6 87643418 87648187 + MGP_129S1SvImJ_P0078538 Fam136a protein_coding protein_coding MGP_129S1SvImJ_T0078539.1 MGP_129S1SvImJ_G0030972.1 mouse_genomes_project 6 87643486 87644792 + Fam136a protein_coding retained_intron MGP_129S1SvImJ_T0078540.1 MGP_129S1SvImJ_G0030972.1 mouse_genomes_project 6 87643496 87646572 + MGP_129S1SvImJ_P0078540 Fam136a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079350.1 MGP_129S1SvImJ_G0031128.1 mouse_genomes_project 6 116016444 116024691 - MGP_129S1SvImJ_P0079350 Prrt3 protein_coding protein_coding MGP_129S1SvImJ_T0079351.1 MGP_129S1SvImJ_G0031128.1 mouse_genomes_project 6 116016730 116024739 - MGP_129S1SvImJ_P0079351 Prrt3 protein_coding protein_coding MGP_129S1SvImJ_T0079352.1 MGP_129S1SvImJ_G0031128.1 mouse_genomes_project 6 116016900 116024626 - MGP_129S1SvImJ_P0079352 Prrt3 protein_coding protein_coding MGP_129S1SvImJ_T0079353.1 MGP_129S1SvImJ_G0031128.1 mouse_genomes_project 6 116019073 116024695 - MGP_129S1SvImJ_P0079353 Prrt3 protein_coding protein_coding MGP_129S1SvImJ_T0079354.1 MGP_129S1SvImJ_G0031128.1 mouse_genomes_project 6 116019105 116024701 - MGP_129S1SvImJ_P0079354 Prrt3 protein_coding protein_coding MGP_129S1SvImJ_T0015462.1 MGP_129S1SvImJ_G0013551.1 mouse_genomes_project 6 73928282 73928706 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010803.1 MGP_129S1SvImJ_G0008919.1 mouse_genomes_project 6 89361047 89361175 - miRNA miRNA MGP_129S1SvImJ_T0015470.1 MGP_129S1SvImJ_G0013559.1 mouse_genomes_project 6 77200822 77201297 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008684.1 MGP_129S1SvImJ_G0007020.1 mouse_genomes_project 6 92018751 92051633 + lincRNA lincRNA MGP_129S1SvImJ_T0078439.1 MGP_129S1SvImJ_G0030948.1 mouse_genomes_project 6 86252573 86271180 - MGP_129S1SvImJ_P0078439 Spr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078440.1 MGP_129S1SvImJ_G0030948.1 mouse_genomes_project 6 86262968 86271180 - MGP_129S1SvImJ_P0078440 Spr protein_coding protein_coding MGP_129S1SvImJ_T0078441.1 MGP_129S1SvImJ_G0030948.1 mouse_genomes_project 6 86262977 86271170 - MGP_129S1SvImJ_P0078441 Spr protein_coding protein_coding MGP_129S1SvImJ_T0078442.1 MGP_129S1SvImJ_G0030948.1 mouse_genomes_project 6 86263290 86271176 - MGP_129S1SvImJ_P0078442 Spr protein_coding protein_coding MGP_129S1SvImJ_T0015584.1 MGP_129S1SvImJ_G0013673.1 mouse_genomes_project 6 122862877 122863165 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081125.1 MGP_129S1SvImJ_G0031509.1 mouse_genomes_project 6 154258726 154264214 + MGP_129S1SvImJ_P0081125 Mettl20 protein_coding protein_coding MGP_129S1SvImJ_T0081126.1 MGP_129S1SvImJ_G0031509.1 mouse_genomes_project 6 154260390 154271258 + MGP_129S1SvImJ_P0081126 Mettl20 protein_coding protein_coding MGP_129S1SvImJ_T0081127.1 MGP_129S1SvImJ_G0031509.1 mouse_genomes_project 6 154260390 154271253 + MGP_129S1SvImJ_P0081127 Mettl20 protein_coding protein_coding MGP_129S1SvImJ_T0081128.1 MGP_129S1SvImJ_G0031509.1 mouse_genomes_project 6 154260393 154265060 + MGP_129S1SvImJ_P0081128 Mettl20 protein_coding protein_coding MGP_129S1SvImJ_T0081129.1 MGP_129S1SvImJ_G0031509.1 mouse_genomes_project 6 154260431 154265060 + MGP_129S1SvImJ_P0081129 Mettl20 protein_coding protein_coding MGP_129S1SvImJ_T0081130.1 MGP_129S1SvImJ_G0031509.1 mouse_genomes_project 6 154260441 154270485 + MGP_129S1SvImJ_P0081130 Mettl20 protein_coding protein_coding MGP_129S1SvImJ_T0081131.1 MGP_129S1SvImJ_G0031509.1 mouse_genomes_project 6 154260451 154271258 + MGP_129S1SvImJ_P0081131 Mettl20 protein_coding protein_coding MGP_129S1SvImJ_T0081132.1 MGP_129S1SvImJ_G0031509.1 mouse_genomes_project 6 154260515 154270500 + MGP_129S1SvImJ_P0081132 Mettl20 protein_coding protein_coding MGP_129S1SvImJ_T0081133.1 MGP_129S1SvImJ_G0031509.1 mouse_genomes_project 6 154260523 154271258 + MGP_129S1SvImJ_P0081133 Mettl20 protein_coding protein_coding MGP_129S1SvImJ_T0077572.1 MGP_129S1SvImJ_G0030748.1 mouse_genomes_project 6 51472367 51476109 - MGP_129S1SvImJ_P0077572 Hoxa10 protein_coding protein_coding MGP_129S1SvImJ_T0077573.1 MGP_129S1SvImJ_G0030748.1 mouse_genomes_project 6 51472369 51474494 - Hoxa10 protein_coding processed_transcript MGP_129S1SvImJ_T0077574.1 MGP_129S1SvImJ_G0030748.1 mouse_genomes_project 6 51473091 51482023 - MGP_129S1SvImJ_P0077574 Hoxa10 protein_coding protein_coding MGP_129S1SvImJ_T0077575.1 MGP_129S1SvImJ_G0030748.1 mouse_genomes_project 6 51473251 51481964 - Hoxa10 protein_coding processed_transcript MGP_129S1SvImJ_T0076209.1 MGP_129S1SvImJ_G0030436.1 mouse_genomes_project 6 2330365 2345876 - MGP_129S1SvImJ_P0076209 Pdk4 protein_coding protein_coding MGP_129S1SvImJ_T0076210.1 MGP_129S1SvImJ_G0030436.1 mouse_genomes_project 6 2339925 2345828 - MGP_129S1SvImJ_P0076210 Pdk4 protein_coding protein_coding MGP_129S1SvImJ_T0076211.1 MGP_129S1SvImJ_G0030436.1 mouse_genomes_project 6 2343197 2345842 - Pdk4 protein_coding retained_intron MGP_129S1SvImJ_T0002125.1 MGP_129S1SvImJ_G0002038.1 mouse_genomes_project 6 103220276 103223136 + TEC TEC MGP_129S1SvImJ_T0100008.1 MGP_129S1SvImJ_G0038075.1 mouse_genomes_project 6 82582868 82583027 + Gm26264 snRNA snRNA MGP_129S1SvImJ_T0000141.1 MGP_129S1SvImJ_G0000108.1 mouse_genomes_project 6 67744170 67744667 - MGP_129S1SvImJ_P0000141 Igkv17-121 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0010809.1 MGP_129S1SvImJ_G0008925.1 mouse_genomes_project 6 101433302 101433414 - Gm22328 miRNA miRNA MGP_129S1SvImJ_T0081083.1 MGP_129S1SvImJ_G0031503.1 mouse_genomes_project 6 153298876 153523452 - MGP_129S1SvImJ_P0081083 Tmtc1 protein_coding protein_coding MGP_129S1SvImJ_T0081084.1 MGP_129S1SvImJ_G0031503.1 mouse_genomes_project 6 153298876 153523452 - MGP_129S1SvImJ_P0081084 Tmtc1 protein_coding protein_coding MGP_129S1SvImJ_T0081085.1 MGP_129S1SvImJ_G0031503.1 mouse_genomes_project 6 153315355 153520690 - MGP_129S1SvImJ_P0081085 Tmtc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081086.1 MGP_129S1SvImJ_G0031503.1 mouse_genomes_project 6 153487640 153520690 - MGP_129S1SvImJ_P0081086 Tmtc1 protein_coding protein_coding MGP_129S1SvImJ_T0015508.1 MGP_129S1SvImJ_G0013597.1 mouse_genomes_project 6 93719916 93720357 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008724.1 MGP_129S1SvImJ_G0007052.1 mouse_genomes_project 6 120338984 120451813 - lincRNA lincRNA MGP_129S1SvImJ_T0008725.1 MGP_129S1SvImJ_G0007052.1 mouse_genomes_project 6 120338985 120408616 - lincRNA lincRNA MGP_129S1SvImJ_T0008726.1 MGP_129S1SvImJ_G0007052.1 mouse_genomes_project 6 120372437 120451813 - lincRNA lincRNA MGP_129S1SvImJ_T0015615.1 MGP_129S1SvImJ_G0013704.1 mouse_genomes_project 6 130464948 130465678 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080295.1 MGP_129S1SvImJ_G0031310.1 mouse_genomes_project 6 130495475 130508064 + MGP_129S1SvImJ_P0080295 Fgf6 protein_coding protein_coding MGP_129S1SvImJ_T0101287.1 MGP_129S1SvImJ_G0039354.1 mouse_genomes_project 6 127563786 127563918 - Gm25311 snoRNA snoRNA MGP_129S1SvImJ_T0015325.1 MGP_129S1SvImJ_G0013414.1 mouse_genomes_project 6 38060913 38061429 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080752.1 MGP_129S1SvImJ_G0031442.1 mouse_genomes_project 6 143264961 143266417 - MGP_129S1SvImJ_P0080752 Igbp1b protein_coding protein_coding MGP_129S1SvImJ_T0002147.1 MGP_129S1SvImJ_G0002060.1 mouse_genomes_project 6 118582287 118583127 - TEC TEC MGP_129S1SvImJ_T0078126.1 MGP_129S1SvImJ_G0030886.1 mouse_genomes_project 6 73637646 73836226 - MGP_129S1SvImJ_P0078126 Dnah6 protein_coding protein_coding MGP_129S1SvImJ_T0078127.1 MGP_129S1SvImJ_G0030886.1 mouse_genomes_project 6 73637649 73836246 - MGP_129S1SvImJ_P0078127 Dnah6 protein_coding protein_coding MGP_129S1SvImJ_T0078128.1 MGP_129S1SvImJ_G0030886.1 mouse_genomes_project 6 73637782 73834388 - MGP_129S1SvImJ_P0078128 Dnah6 protein_coding protein_coding MGP_129S1SvImJ_T0078129.1 MGP_129S1SvImJ_G0030886.1 mouse_genomes_project 6 73709350 73759901 - Dnah6 protein_coding retained_intron MGP_129S1SvImJ_T0079633.1 MGP_129S1SvImJ_G0031181.1 mouse_genomes_project 6 120651640 120656150 - MGP_129S1SvImJ_P0079633 Fxyd4 protein_coding protein_coding MGP_129S1SvImJ_T0079634.1 MGP_129S1SvImJ_G0031181.1 mouse_genomes_project 6 120651641 120655793 - MGP_129S1SvImJ_P0079634 Fxyd4 protein_coding protein_coding MGP_129S1SvImJ_T0079635.1 MGP_129S1SvImJ_G0031181.1 mouse_genomes_project 6 120651641 120655793 - MGP_129S1SvImJ_P0079635 Fxyd4 protein_coding protein_coding MGP_129S1SvImJ_T0079636.1 MGP_129S1SvImJ_G0031181.1 mouse_genomes_project 6 120651641 120655793 - MGP_129S1SvImJ_P0079636 Fxyd4 protein_coding protein_coding MGP_129S1SvImJ_T0079637.1 MGP_129S1SvImJ_G0031181.1 mouse_genomes_project 6 120651641 120655793 - MGP_129S1SvImJ_P0079637 Fxyd4 protein_coding protein_coding MGP_129S1SvImJ_T0079638.1 MGP_129S1SvImJ_G0031181.1 mouse_genomes_project 6 120651810 120655793 - MGP_129S1SvImJ_P0079638 Fxyd4 protein_coding protein_coding MGP_129S1SvImJ_T0079639.1 MGP_129S1SvImJ_G0031181.1 mouse_genomes_project 6 120652912 120655793 - Fxyd4 protein_coding retained_intron MGP_129S1SvImJ_T0079640.1 MGP_129S1SvImJ_G0031181.1 mouse_genomes_project 6 120652917 120654411 - Fxyd4 protein_coding retained_intron MGP_129S1SvImJ_T0079641.1 MGP_129S1SvImJ_G0031181.1 mouse_genomes_project 6 120652919 120655793 - Fxyd4 protein_coding retained_intron MGP_129S1SvImJ_T0080419.1 MGP_129S1SvImJ_G0031340.1 mouse_genomes_project 6 132751842 132760494 - MGP_129S1SvImJ_P0080419 Clec2e protein_coding protein_coding MGP_129S1SvImJ_T0078112.1 MGP_129S1SvImJ_G0030882.1 mouse_genomes_project 6 73179228 73188959 - MGP_129S1SvImJ_P0078112 Tgoln1 protein_coding protein_coding MGP_129S1SvImJ_T0079561.1 MGP_129S1SvImJ_G0031166.1 mouse_genomes_project 6 119002703 119083005 + MGP_129S1SvImJ_P0079561 protein_coding protein_coding MGP_129S1SvImJ_T0079562.1 MGP_129S1SvImJ_G0031166.1 mouse_genomes_project 6 119002706 119083008 + MGP_129S1SvImJ_P0079562 protein_coding protein_coding MGP_129S1SvImJ_T0079563.1 MGP_129S1SvImJ_G0031166.1 mouse_genomes_project 6 119002712 119083005 + MGP_129S1SvImJ_P0079563 protein_coding protein_coding MGP_129S1SvImJ_T0079564.1 MGP_129S1SvImJ_G0031166.1 mouse_genomes_project 6 119002723 119079217 + MGP_129S1SvImJ_P0079564 protein_coding protein_coding MGP_129S1SvImJ_T0079565.1 MGP_129S1SvImJ_G0031166.1 mouse_genomes_project 6 119002732 119079205 + MGP_129S1SvImJ_P0079565 protein_coding protein_coding MGP_129S1SvImJ_T0079566.1 MGP_129S1SvImJ_G0031166.1 mouse_genomes_project 6 119002743 119042833 + MGP_129S1SvImJ_P0079566 protein_coding protein_coding MGP_129S1SvImJ_T0079567.1 MGP_129S1SvImJ_G0031166.1 mouse_genomes_project 6 119014435 119017520 + protein_coding retained_intron MGP_129S1SvImJ_T0079568.1 MGP_129S1SvImJ_G0031166.1 mouse_genomes_project 6 119014920 119075758 + MGP_129S1SvImJ_P0079568 protein_coding protein_coding MGP_129S1SvImJ_T0079569.1 MGP_129S1SvImJ_G0031166.1 mouse_genomes_project 6 119014961 119042894 + MGP_129S1SvImJ_P0079569 protein_coding protein_coding MGP_129S1SvImJ_T0079570.1 MGP_129S1SvImJ_G0031166.1 mouse_genomes_project 6 119042723 119073761 + protein_coding retained_intron MGP_129S1SvImJ_T0079571.1 MGP_129S1SvImJ_G0031166.1 mouse_genomes_project 6 119055421 119079688 + MGP_129S1SvImJ_P0079571 protein_coding protein_coding MGP_129S1SvImJ_T0079572.1 MGP_129S1SvImJ_G0031166.1 mouse_genomes_project 6 119055447 119079598 + protein_coding retained_intron MGP_129S1SvImJ_T0079573.1 MGP_129S1SvImJ_G0031166.1 mouse_genomes_project 6 119064852 119074187 + protein_coding processed_transcript MGP_129S1SvImJ_T0079574.1 MGP_129S1SvImJ_G0031166.1 mouse_genomes_project 6 119075321 119079246 + protein_coding processed_transcript MGP_129S1SvImJ_T0079575.1 MGP_129S1SvImJ_G0031166.1 mouse_genomes_project 6 119078640 119079769 + protein_coding processed_transcript MGP_129S1SvImJ_T0015655.1 MGP_129S1SvImJ_G0013744.1 mouse_genomes_project 6 137283065 137283411 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078166.1 MGP_129S1SvImJ_G0030898.1 mouse_genomes_project 6 79277798 79280101 - Reg3g protein_coding retained_intron MGP_129S1SvImJ_T0078167.1 MGP_129S1SvImJ_G0030898.1 mouse_genomes_project 6 79277798 79280402 - MGP_129S1SvImJ_P0078167 Reg3g protein_coding protein_coding MGP_129S1SvImJ_T0002022.1 MGP_129S1SvImJ_G0001935.1 mouse_genomes_project 6 71320490 71322936 - TEC TEC MGP_129S1SvImJ_T0005085.1 MGP_129S1SvImJ_G0004339.1 mouse_genomes_project 6 116179645 116180608 - Gm43964 antisense antisense MGP_129S1SvImJ_T0101267.1 MGP_129S1SvImJ_G0039334.1 mouse_genomes_project 6 95217004 95217134 + Gm22312 snoRNA snoRNA MGP_129S1SvImJ_T0008545.1 MGP_129S1SvImJ_G0006920.1 mouse_genomes_project 6 28993183 28993487 - Gm13834 lincRNA lincRNA MGP_129S1SvImJ_T0015420.1 MGP_129S1SvImJ_G0013509.1 mouse_genomes_project 6 66458564 66459213 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005110.1 MGP_129S1SvImJ_G0004363.1 mouse_genomes_project 6 130631022 130699741 + 9330179D12Rik antisense antisense MGP_129S1SvImJ_T0005111.1 MGP_129S1SvImJ_G0004363.1 mouse_genomes_project 6 130631259 130700033 + 9330179D12Rik antisense antisense MGP_129S1SvImJ_T0008649.1 MGP_129S1SvImJ_G0006996.1 mouse_genomes_project 6 82869411 82878934 - 1700009C05Rik lincRNA lincRNA MGP_129S1SvImJ_T0099983.1 MGP_129S1SvImJ_G0038050.1 mouse_genomes_project 6 11567152 11567258 - Gm23013 snRNA snRNA MGP_129S1SvImJ_T0077401.1 MGP_129S1SvImJ_G0030706.1 mouse_genomes_project 6 47640378 47647208 + MGP_129S1SvImJ_P0077401 Gimap4 protein_coding protein_coding MGP_129S1SvImJ_T0077402.1 MGP_129S1SvImJ_G0030706.1 mouse_genomes_project 6 47640407 47647890 + MGP_129S1SvImJ_P0077402 Gimap4 protein_coding protein_coding MGP_129S1SvImJ_T0077403.1 MGP_129S1SvImJ_G0030706.1 mouse_genomes_project 6 47640407 47647890 + MGP_129S1SvImJ_P0077403 Gimap4 protein_coding protein_coding MGP_129S1SvImJ_T0077404.1 MGP_129S1SvImJ_G0030706.1 mouse_genomes_project 6 47640410 47647707 + MGP_129S1SvImJ_P0077404 Gimap4 protein_coding protein_coding MGP_129S1SvImJ_T0077405.1 MGP_129S1SvImJ_G0030706.1 mouse_genomes_project 6 47640410 47647887 + MGP_129S1SvImJ_P0077405 Gimap4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077406.1 MGP_129S1SvImJ_G0030706.1 mouse_genomes_project 6 47640411 47647890 + MGP_129S1SvImJ_P0077406 Gimap4 protein_coding protein_coding MGP_129S1SvImJ_T0076641.1 MGP_129S1SvImJ_G0030525.1 mouse_genomes_project 6 27268936 27270965 + MGP_129S1SvImJ_P0076641 Gm9047 protein_coding protein_coding MGP_129S1SvImJ_T0077142.1 MGP_129S1SvImJ_G0030620.1 mouse_genomes_project 6 39417458 39421150 - MGP_129S1SvImJ_P0077142 Gm4744 protein_coding protein_coding MGP_129S1SvImJ_T0100029.1 MGP_129S1SvImJ_G0038096.1 mouse_genomes_project 6 132830548 132830611 + Gm26160 snRNA snRNA MGP_129S1SvImJ_T0076203.1 MGP_129S1SvImJ_G0030434.1 mouse_genomes_project 6 2107322 2141585 - MGP_129S1SvImJ_P0076203 Pon2 protein_coding protein_coding MGP_129S1SvImJ_T0076204.1 MGP_129S1SvImJ_G0030434.1 mouse_genomes_project 6 2113328 2141460 - Pon2 protein_coding retained_intron MGP_129S1SvImJ_T0076205.1 MGP_129S1SvImJ_G0030434.1 mouse_genomes_project 6 2116321 2132244 - Pon2 protein_coding processed_transcript MGP_129S1SvImJ_T0076206.1 MGP_129S1SvImJ_G0030434.1 mouse_genomes_project 6 2120718 2123556 - Pon2 protein_coding retained_intron MGP_129S1SvImJ_T0004924.1 MGP_129S1SvImJ_G0004233.1 mouse_genomes_project 6 14286231 14403196 - Gm4876 antisense antisense MGP_129S1SvImJ_T0004925.1 MGP_129S1SvImJ_G0004233.1 mouse_genomes_project 6 14297483 14403540 - Gm4876 antisense antisense MGP_129S1SvImJ_T0004926.1 MGP_129S1SvImJ_G0004233.1 mouse_genomes_project 6 14318723 14403172 - Gm4876 antisense antisense MGP_129S1SvImJ_T0004927.1 MGP_129S1SvImJ_G0004233.1 mouse_genomes_project 6 14333073 14403324 - Gm4876 antisense antisense MGP_129S1SvImJ_T0004928.1 MGP_129S1SvImJ_G0004233.1 mouse_genomes_project 6 14392396 14403453 - Gm4876 antisense antisense MGP_129S1SvImJ_T0004929.1 MGP_129S1SvImJ_G0004233.1 mouse_genomes_project 6 14403095 14403517 - Gm4876 antisense antisense MGP_129S1SvImJ_T0015429.1 MGP_129S1SvImJ_G0013518.1 mouse_genomes_project 6 67383683 67384607 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077934.1 MGP_129S1SvImJ_G0030847.1 mouse_genomes_project 6 67548460 67550195 - MGP_129S1SvImJ_P0077934 Tacstd2 protein_coding protein_coding MGP_129S1SvImJ_T0015432.1 MGP_129S1SvImJ_G0013521.1 mouse_genomes_project 6 67418759 67419096 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077705.1 MGP_129S1SvImJ_G0030778.1 mouse_genomes_project 6 55517777 55808165 - MGP_129S1SvImJ_P0077705 Pde1c protein_coding protein_coding MGP_129S1SvImJ_T0077706.1 MGP_129S1SvImJ_G0030778.1 mouse_genomes_project 6 55519739 56017872 - MGP_129S1SvImJ_P0077706 Pde1c protein_coding protein_coding MGP_129S1SvImJ_T0077707.1 MGP_129S1SvImJ_G0030778.1 mouse_genomes_project 6 55520348 55807628 - Pde1c protein_coding processed_transcript MGP_129S1SvImJ_T0077708.1 MGP_129S1SvImJ_G0030778.1 mouse_genomes_project 6 55526095 55808292 - MGP_129S1SvImJ_P0077708 Pde1c protein_coding protein_coding MGP_129S1SvImJ_T0077709.1 MGP_129S1SvImJ_G0030778.1 mouse_genomes_project 6 55530112 55817648 - MGP_129S1SvImJ_P0077709 Pde1c protein_coding protein_coding MGP_129S1SvImJ_T0077710.1 MGP_129S1SvImJ_G0030778.1 mouse_genomes_project 6 55530227 55570995 - MGP_129S1SvImJ_P0077710 Pde1c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077711.1 MGP_129S1SvImJ_G0030778.1 mouse_genomes_project 6 55530280 55817667 - MGP_129S1SvImJ_P0077711 Pde1c protein_coding protein_coding MGP_129S1SvImJ_T0077712.1 MGP_129S1SvImJ_G0030778.1 mouse_genomes_project 6 55548487 55808084 - MGP_129S1SvImJ_P0077712 Pde1c protein_coding protein_coding MGP_129S1SvImJ_T0077713.1 MGP_129S1SvImJ_G0030778.1 mouse_genomes_project 6 55552071 55817696 - MGP_129S1SvImJ_P0077713 Pde1c protein_coding protein_coding MGP_129S1SvImJ_T0077714.1 MGP_129S1SvImJ_G0030778.1 mouse_genomes_project 6 55553785 55810063 - MGP_129S1SvImJ_P0077714 Pde1c protein_coding protein_coding MGP_129S1SvImJ_T0077715.1 MGP_129S1SvImJ_G0030778.1 mouse_genomes_project 6 55554239 55808139 - MGP_129S1SvImJ_P0077715 Pde1c protein_coding protein_coding MGP_129S1SvImJ_T0077716.1 MGP_129S1SvImJ_G0030778.1 mouse_genomes_project 6 55629214 55808147 - Pde1c protein_coding retained_intron MGP_129S1SvImJ_T0077717.1 MGP_129S1SvImJ_G0030778.1 mouse_genomes_project 6 55787599 55808086 - Pde1c protein_coding retained_intron MGP_129S1SvImJ_T0077718.1 MGP_129S1SvImJ_G0030778.1 mouse_genomes_project 6 55790816 55817669 - Pde1c protein_coding retained_intron MGP_129S1SvImJ_T0077514.1 MGP_129S1SvImJ_G0030732.1 mouse_genomes_project 6 49773726 49777490 - MGP_129S1SvImJ_P0077514 Npvf protein_coding protein_coding MGP_129S1SvImJ_T0000320.1 MGP_129S1SvImJ_G0000262.1 mouse_genomes_project 6 68888722 68889766 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0002704.1 MGP_129S1SvImJ_G0002585.1 mouse_genomes_project 6 39609801 39610240 + MGP_129S1SvImJ_P0002704 Trbv13-3 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0015318.1 MGP_129S1SvImJ_G0013407.1 mouse_genomes_project 6 34799604 34800032 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010835.1 MGP_129S1SvImJ_G0008951.1 mouse_genomes_project 6 133362844 133362953 + Mir680-1 miRNA miRNA MGP_129S1SvImJ_T0079355.1 MGP_129S1SvImJ_G0031129.1 mouse_genomes_project 6 116037363 116054132 - MGP_129S1SvImJ_P0079355 Emc3 protein_coding protein_coding MGP_129S1SvImJ_T0079356.1 MGP_129S1SvImJ_G0031129.1 mouse_genomes_project 6 116042281 116043399 - Emc3 protein_coding retained_intron MGP_129S1SvImJ_T0079357.1 MGP_129S1SvImJ_G0031129.1 mouse_genomes_project 6 116052905 116054098 - Emc3 protein_coding retained_intron MGP_129S1SvImJ_T0101939.1 MGP_129S1SvImJ_G0039832.1 mouse_genomes_project 6 86286906 86289798 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101940.1 MGP_129S1SvImJ_G0039832.1 mouse_genomes_project 6 86289290 86290254 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101941.1 MGP_129S1SvImJ_G0039832.1 mouse_genomes_project 6 86289493 86290509 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0008605.1 MGP_129S1SvImJ_G0006959.1 mouse_genomes_project 6 50555374 50572547 - Gm26677 lincRNA lincRNA MGP_129S1SvImJ_T0078524.1 MGP_129S1SvImJ_G0030970.1 mouse_genomes_project 6 87282227 87357003 + Add2 protein_coding retained_intron MGP_129S1SvImJ_T0078525.1 MGP_129S1SvImJ_G0030970.1 mouse_genomes_project 6 87282250 87384282 + MGP_129S1SvImJ_P0078525 Add2 protein_coding protein_coding MGP_129S1SvImJ_T0078526.1 MGP_129S1SvImJ_G0030970.1 mouse_genomes_project 6 87282293 87369361 + MGP_129S1SvImJ_P0078526 Add2 protein_coding protein_coding MGP_129S1SvImJ_T0078527.1 MGP_129S1SvImJ_G0030970.1 mouse_genomes_project 6 87310731 87353277 + MGP_129S1SvImJ_P0078527 Add2 protein_coding protein_coding MGP_129S1SvImJ_T0078528.1 MGP_129S1SvImJ_G0030970.1 mouse_genomes_project 6 87337839 87379441 + MGP_129S1SvImJ_P0078528 Add2 protein_coding protein_coding MGP_129S1SvImJ_T0078529.1 MGP_129S1SvImJ_G0030970.1 mouse_genomes_project 6 87337839 87369359 + MGP_129S1SvImJ_P0078529 Add2 protein_coding protein_coding MGP_129S1SvImJ_T0078530.1 MGP_129S1SvImJ_G0030970.1 mouse_genomes_project 6 87337866 87379441 + MGP_129S1SvImJ_P0078530 Add2 protein_coding protein_coding MGP_129S1SvImJ_T0078531.1 MGP_129S1SvImJ_G0030970.1 mouse_genomes_project 6 87342600 87378712 + MGP_129S1SvImJ_P0078531 Add2 protein_coding protein_coding MGP_129S1SvImJ_T0078532.1 MGP_129S1SvImJ_G0030970.1 mouse_genomes_project 6 87342600 87368190 + MGP_129S1SvImJ_P0078532 Add2 protein_coding protein_coding MGP_129S1SvImJ_T0078533.1 MGP_129S1SvImJ_G0030970.1 mouse_genomes_project 6 87345671 87378688 + MGP_129S1SvImJ_P0078533 Add2 protein_coding protein_coding MGP_129S1SvImJ_T0079074.1 MGP_129S1SvImJ_G0031079.1 mouse_genomes_project 6 100113609 100225390 - MGP_129S1SvImJ_P0079074 Gm765 protein_coding protein_coding MGP_129S1SvImJ_T0079075.1 MGP_129S1SvImJ_G0031079.1 mouse_genomes_project 6 100224098 100225295 - Gm765 protein_coding retained_intron MGP_129S1SvImJ_T0077513.1 MGP_129S1SvImJ_G0030731.1 mouse_genomes_project 6 49695398 49718737 - MGP_129S1SvImJ_P0077513 4921507P07Rik protein_coding protein_coding MGP_129S1SvImJ_T0000164.1 MGP_129S1SvImJ_G0000126.1 mouse_genomes_project 6 68650623 68651109 + MGP_129S1SvImJ_P0000164 Igkv15-103 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0005072.1 MGP_129S1SvImJ_G0004331.1 mouse_genomes_project 6 110778844 110785534 - Gm44040 antisense antisense MGP_129S1SvImJ_T0015586.1 MGP_129S1SvImJ_G0013675.1 mouse_genomes_project 6 124048316 124049747 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077238.1 MGP_129S1SvImJ_G0030659.1 mouse_genomes_project 6 41196939 41242574 - MGP_129S1SvImJ_P0077238 Tcaf1 protein_coding protein_coding MGP_129S1SvImJ_T0077239.1 MGP_129S1SvImJ_G0030659.1 mouse_genomes_project 6 41198879 41223579 - MGP_129S1SvImJ_P0077239 Tcaf1 protein_coding protein_coding MGP_129S1SvImJ_T0077240.1 MGP_129S1SvImJ_G0030659.1 mouse_genomes_project 6 41199966 41223551 - MGP_129S1SvImJ_P0077240 Tcaf1 protein_coding protein_coding MGP_129S1SvImJ_T0077241.1 MGP_129S1SvImJ_G0030659.1 mouse_genomes_project 6 41206467 41223495 - Tcaf1 protein_coding retained_intron MGP_129S1SvImJ_T0077242.1 MGP_129S1SvImJ_G0030659.1 mouse_genomes_project 6 41208797 41242557 - Tcaf1 protein_coding processed_transcript MGP_129S1SvImJ_T0077243.1 MGP_129S1SvImJ_G0030659.1 mouse_genomes_project 6 41215730 41242557 - Tcaf1 protein_coding retained_intron MGP_129S1SvImJ_T0077244.1 MGP_129S1SvImJ_G0030659.1 mouse_genomes_project 6 41220790 41223500 - Tcaf1 protein_coding processed_transcript MGP_129S1SvImJ_T0077245.1 MGP_129S1SvImJ_G0030659.1 mouse_genomes_project 6 41241582 41242558 - Tcaf1 protein_coding processed_transcript MGP_129S1SvImJ_T0080562.1 MGP_129S1SvImJ_G0031406.1 mouse_genomes_project 6 138906626 138986936 + MGP_129S1SvImJ_P0080562 Borcs5 protein_coding protein_coding MGP_129S1SvImJ_T0080563.1 MGP_129S1SvImJ_G0031406.1 mouse_genomes_project 6 138908056 138987768 + MGP_129S1SvImJ_P0080563 Borcs5 protein_coding protein_coding MGP_129S1SvImJ_T0080564.1 MGP_129S1SvImJ_G0031406.1 mouse_genomes_project 6 138908077 138911831 + Borcs5 protein_coding retained_intron MGP_129S1SvImJ_T0080565.1 MGP_129S1SvImJ_G0031406.1 mouse_genomes_project 6 138908371 138956472 + Borcs5 protein_coding retained_intron MGP_129S1SvImJ_T0080566.1 MGP_129S1SvImJ_G0031406.1 mouse_genomes_project 6 138975797 138987036 + Borcs5 protein_coding processed_transcript MGP_129S1SvImJ_T0101284.1 MGP_129S1SvImJ_G0039351.1 mouse_genomes_project 6 127310847 127310923 - Gm24843 snoRNA snoRNA MGP_129S1SvImJ_T0002050.1 MGP_129S1SvImJ_G0001963.1 mouse_genomes_project 6 78803072 78805125 + TEC TEC MGP_129S1SvImJ_T0008739.1 MGP_129S1SvImJ_G0007065.1 mouse_genomes_project 6 129757035 129762051 + lincRNA lincRNA MGP_129S1SvImJ_T0080344.1 MGP_129S1SvImJ_G0031322.1 mouse_genomes_project 6 131964111 131970124 + Foxm1 protein_coding processed_transcript MGP_129S1SvImJ_T0080345.1 MGP_129S1SvImJ_G0031322.1 mouse_genomes_project 6 131964111 131977230 + MGP_129S1SvImJ_P0080345 Foxm1 protein_coding protein_coding MGP_129S1SvImJ_T0080346.1 MGP_129S1SvImJ_G0031322.1 mouse_genomes_project 6 131966849 131975052 + MGP_129S1SvImJ_P0080346 Foxm1 protein_coding protein_coding MGP_129S1SvImJ_T0080347.1 MGP_129S1SvImJ_G0031322.1 mouse_genomes_project 6 131967311 131974444 + MGP_129S1SvImJ_P0080347 Foxm1 protein_coding protein_coding MGP_129S1SvImJ_T0080348.1 MGP_129S1SvImJ_G0031322.1 mouse_genomes_project 6 131968448 131973957 + MGP_129S1SvImJ_P0080348 Foxm1 protein_coding protein_coding MGP_129S1SvImJ_T0080349.1 MGP_129S1SvImJ_G0031322.1 mouse_genomes_project 6 131968526 131973256 + Foxm1 protein_coding retained_intron MGP_129S1SvImJ_T0080350.1 MGP_129S1SvImJ_G0031322.1 mouse_genomes_project 6 131970601 131972456 + Foxm1 protein_coding retained_intron MGP_129S1SvImJ_T0080351.1 MGP_129S1SvImJ_G0031322.1 mouse_genomes_project 6 131972044 131974268 + Foxm1 protein_coding retained_intron MGP_129S1SvImJ_T0015514.1 MGP_129S1SvImJ_G0013603.1 mouse_genomes_project 6 96069537 96070301 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011639.1 MGP_129S1SvImJ_G0009755.1 mouse_genomes_project 6 3736869 3737076 + Gm27905 misc_RNA misc_RNA MGP_129S1SvImJ_T0000156.1 MGP_129S1SvImJ_G0000119.1 mouse_genomes_project 6 68128876 68130145 + MGP_129S1SvImJ_P0000156 Igkv1-110 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0077025.1 MGP_129S1SvImJ_G0030589.1 mouse_genomes_project 6 36956954 36970093 - MGP_129S1SvImJ_P0077025 Klrg2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077026.1 MGP_129S1SvImJ_G0030589.1 mouse_genomes_project 6 36957921 36970093 - MGP_129S1SvImJ_P0077026 Klrg2 protein_coding protein_coding MGP_129S1SvImJ_T0077027.1 MGP_129S1SvImJ_G0030589.1 mouse_genomes_project 6 36958522 36970102 - MGP_129S1SvImJ_P0077027 Klrg2 protein_coding protein_coding MGP_129S1SvImJ_T0005102.1 MGP_129S1SvImJ_G0004356.1 mouse_genomes_project 6 128232180 128241174 + A230083G16Rik antisense antisense MGP_129S1SvImJ_T0076653.1 MGP_129S1SvImJ_G0030527.1 mouse_genomes_project 6 27329836 27341909 + MGP_129S1SvImJ_P0076653 Irf5 protein_coding protein_coding MGP_129S1SvImJ_T0076654.1 MGP_129S1SvImJ_G0030527.1 mouse_genomes_project 6 27329919 27346367 + MGP_129S1SvImJ_P0076654 Irf5 protein_coding protein_coding MGP_129S1SvImJ_T0076655.1 MGP_129S1SvImJ_G0030527.1 mouse_genomes_project 6 27331481 27338587 + MGP_129S1SvImJ_P0076655 Irf5 protein_coding protein_coding MGP_129S1SvImJ_T0076656.1 MGP_129S1SvImJ_G0030527.1 mouse_genomes_project 6 27333870 27341909 + MGP_129S1SvImJ_P0076656 Irf5 protein_coding protein_coding MGP_129S1SvImJ_T0076657.1 MGP_129S1SvImJ_G0030527.1 mouse_genomes_project 6 27335837 27339936 + MGP_129S1SvImJ_P0076657 Irf5 protein_coding protein_coding MGP_129S1SvImJ_T0076661.1 MGP_129S1SvImJ_G0030527.1 mouse_genomes_project 6 27345642 27346354 + Irf5 protein_coding processed_transcript MGP_129S1SvImJ_T0078008.1 MGP_129S1SvImJ_G0030865.1 mouse_genomes_project 6 72386808 72417270 - MGP_129S1SvImJ_P0078008 Ptcd3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0078009.1 MGP_129S1SvImJ_G0030865.1 mouse_genomes_project 6 72389408 72417249 - MGP_129S1SvImJ_P0078009 Ptcd3 protein_coding protein_coding MGP_129S1SvImJ_T0078010.1 MGP_129S1SvImJ_G0030865.1 mouse_genomes_project 6 72389409 72417249 - MGP_129S1SvImJ_P0078010 Ptcd3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078011.1 MGP_129S1SvImJ_G0030865.1 mouse_genomes_project 6 72389411 72398182 - Ptcd3 protein_coding retained_intron MGP_129S1SvImJ_T0078012.1 MGP_129S1SvImJ_G0030865.1 mouse_genomes_project 6 72393604 72398107 - Ptcd3 protein_coding retained_intron MGP_129S1SvImJ_T0078013.1 MGP_129S1SvImJ_G0030865.1 mouse_genomes_project 6 72395753 72417243 - Ptcd3 protein_coding retained_intron MGP_129S1SvImJ_T0078014.1 MGP_129S1SvImJ_G0030865.1 mouse_genomes_project 6 72397107 72405651 - MGP_129S1SvImJ_P0078014 Ptcd3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078015.1 MGP_129S1SvImJ_G0030865.1 mouse_genomes_project 6 72401476 72403633 - Ptcd3 protein_coding retained_intron MGP_129S1SvImJ_T0078016.1 MGP_129S1SvImJ_G0030865.1 mouse_genomes_project 6 72403791 72406935 - Ptcd3 protein_coding retained_intron MGP_129S1SvImJ_T0078017.1 MGP_129S1SvImJ_G0030865.1 mouse_genomes_project 6 72406891 72417217 - MGP_129S1SvImJ_P0078017 Ptcd3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078018.1 MGP_129S1SvImJ_G0030865.1 mouse_genomes_project 6 72411185 72411970 - Ptcd3 protein_coding retained_intron MGP_129S1SvImJ_T0078467.1 MGP_129S1SvImJ_G0030954.1 mouse_genomes_project 6 86613422 86617803 - MGP_129S1SvImJ_P0078467 Pradc1 protein_coding protein_coding MGP_129S1SvImJ_T0078468.1 MGP_129S1SvImJ_G0030954.1 mouse_genomes_project 6 86613653 86617825 - Pradc1 protein_coding retained_intron MGP_129S1SvImJ_T0078469.1 MGP_129S1SvImJ_G0030954.1 mouse_genomes_project 6 86613654 86617872 - MGP_129S1SvImJ_P0078469 Pradc1 protein_coding protein_coding MGP_129S1SvImJ_T0078470.1 MGP_129S1SvImJ_G0030954.1 mouse_genomes_project 6 86613827 86618569 - Pradc1 protein_coding processed_transcript MGP_129S1SvImJ_T0078471.1 MGP_129S1SvImJ_G0030954.1 mouse_genomes_project 6 86614152 86617848 - Pradc1 protein_coding processed_transcript MGP_129S1SvImJ_T0078472.1 MGP_129S1SvImJ_G0030954.1 mouse_genomes_project 6 86614167 86617880 - Pradc1 protein_coding retained_intron MGP_129S1SvImJ_T0078473.1 MGP_129S1SvImJ_G0030954.1 mouse_genomes_project 6 86614299 86617837 - Pradc1 protein_coding processed_transcript MGP_129S1SvImJ_T0102615.1 MGP_129S1SvImJ_G0040448.1 mouse_genomes_project 6 57597456 57598369 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0098377.1 MGP_129S1SvImJ_G0036462.1 mouse_genomes_project 6 70677011 70677241 + pseudogene pseudogene MGP_129S1SvImJ_T0080516.1 MGP_129S1SvImJ_G0031380.1 mouse_genomes_project 6 136729454 136733056 - A630073D07Rik protein_coding processed_transcript MGP_129S1SvImJ_T0080517.1 MGP_129S1SvImJ_G0031380.1 mouse_genomes_project 6 136729454 136733108 - MGP_129S1SvImJ_P0080517 A630073D07Rik protein_coding protein_coding MGP_129S1SvImJ_T0080518.1 MGP_129S1SvImJ_G0031380.1 mouse_genomes_project 6 136729458 136749125 - A630073D07Rik protein_coding processed_transcript MGP_129S1SvImJ_T0011669.1 MGP_129S1SvImJ_G0009785.1 mouse_genomes_project 6 51491333 51491510 + Gm27543 misc_RNA misc_RNA MGP_129S1SvImJ_T0015328.1 MGP_129S1SvImJ_G0013417.1 mouse_genomes_project 6 38983154 38983566 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080484.1 MGP_129S1SvImJ_G0031362.1 mouse_genomes_project 6 133600073 133604227 - protein_coding retained_intron MGP_129S1SvImJ_T0100028.1 MGP_129S1SvImJ_G0038095.1 mouse_genomes_project 6 129277491 129277601 + Gm24947 snRNA snRNA MGP_129S1SvImJ_T0101739.1 MGP_129S1SvImJ_G0039735.1 mouse_genomes_project 6 32500857 32527593 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101740.1 MGP_129S1SvImJ_G0039735.1 mouse_genomes_project 6 32501018 32525526 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101741.1 MGP_129S1SvImJ_G0039735.1 mouse_genomes_project 6 32525494 32525667 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101742.1 MGP_129S1SvImJ_G0039735.1 mouse_genomes_project 6 32525934 32527594 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0001947.1 MGP_129S1SvImJ_G0001860.1 mouse_genomes_project 6 14980957 14983878 + TEC TEC MGP_129S1SvImJ_T0002133.1 MGP_129S1SvImJ_G0002046.1 mouse_genomes_project 6 105675062 105679730 + TEC TEC MGP_129S1SvImJ_T0000342.1 MGP_129S1SvImJ_G0000284.1 mouse_genomes_project 6 70381288 70381598 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0076507.1 MGP_129S1SvImJ_G0030494.1 mouse_genomes_project 6 22084189 22089436 - Ndufa5 protein_coding retained_intron MGP_129S1SvImJ_T0076508.1 MGP_129S1SvImJ_G0030494.1 mouse_genomes_project 6 22084189 22094140 - MGP_129S1SvImJ_P0076508 Ndufa5 protein_coding protein_coding MGP_129S1SvImJ_T0076509.1 MGP_129S1SvImJ_G0030494.1 mouse_genomes_project 6 22084189 22094583 - MGP_129S1SvImJ_P0076509 Ndufa5 protein_coding protein_coding MGP_129S1SvImJ_T0076510.1 MGP_129S1SvImJ_G0030494.1 mouse_genomes_project 6 22084190 22094096 - Ndufa5 protein_coding processed_transcript MGP_129S1SvImJ_T0077143.1 MGP_129S1SvImJ_G0030621.1 mouse_genomes_project 6 39503804 39509046 - MGP_129S1SvImJ_P0077143 2210010C04Rik protein_coding protein_coding MGP_129S1SvImJ_T0077634.1 MGP_129S1SvImJ_G0030759.1 mouse_genomes_project 6 53673290 53675369 + Prr15 protein_coding retained_intron MGP_129S1SvImJ_T0077635.1 MGP_129S1SvImJ_G0030759.1 mouse_genomes_project 6 53674338 53677656 + MGP_129S1SvImJ_P0077635 Prr15 protein_coding protein_coding MGP_129S1SvImJ_T0005002.1 MGP_129S1SvImJ_G0004291.1 mouse_genomes_project 6 73630874 73641229 + Gm44031 antisense antisense MGP_129S1SvImJ_T0076851.1 MGP_129S1SvImJ_G0030556.1 mouse_genomes_project 6 32372656 32377471 - Akr1b3 protein_coding retained_intron MGP_129S1SvImJ_T0076852.1 MGP_129S1SvImJ_G0030556.1 mouse_genomes_project 6 32374156 32387492 - MGP_129S1SvImJ_P0076852 Akr1b3 protein_coding protein_coding MGP_129S1SvImJ_T0076853.1 MGP_129S1SvImJ_G0030556.1 mouse_genomes_project 6 32377636 32387455 - Akr1b3 protein_coding retained_intron MGP_129S1SvImJ_T0076854.1 MGP_129S1SvImJ_G0030556.1 mouse_genomes_project 6 32379806 32387444 - Akr1b3 protein_coding retained_intron MGP_129S1SvImJ_T0076855.1 MGP_129S1SvImJ_G0030556.1 mouse_genomes_project 6 32380618 32387473 - MGP_129S1SvImJ_P0076855 Akr1b3 protein_coding protein_coding MGP_129S1SvImJ_T0078130.1 MGP_129S1SvImJ_G0030887.1 mouse_genomes_project 6 73869965 73901734 + MGP_129S1SvImJ_P0078130 Suclg1 protein_coding protein_coding MGP_129S1SvImJ_T0078131.1 MGP_129S1SvImJ_G0030887.1 mouse_genomes_project 6 73870235 73887237 + MGP_129S1SvImJ_P0078131 Suclg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078132.1 MGP_129S1SvImJ_G0030887.1 mouse_genomes_project 6 73870243 73901727 + MGP_129S1SvImJ_P0078132 Suclg1 protein_coding protein_coding MGP_129S1SvImJ_T0078133.1 MGP_129S1SvImJ_G0030887.1 mouse_genomes_project 6 73870244 73879002 + Suclg1 protein_coding processed_transcript MGP_129S1SvImJ_T0078134.1 MGP_129S1SvImJ_G0030887.1 mouse_genomes_project 6 73870251 73886012 + Suclg1 protein_coding retained_intron MGP_129S1SvImJ_T0078135.1 MGP_129S1SvImJ_G0030887.1 mouse_genomes_project 6 73881868 73887233 + Suclg1 protein_coding retained_intron MGP_129S1SvImJ_T0015442.1 MGP_129S1SvImJ_G0013531.1 mouse_genomes_project 6 68478757 68479454 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080677.1 MGP_129S1SvImJ_G0031432.1 mouse_genomes_project 6 141437475 141456683 - MGP_129S1SvImJ_P0080677 Arhgdib protein_coding protein_coding MGP_129S1SvImJ_T0080678.1 MGP_129S1SvImJ_G0031432.1 mouse_genomes_project 6 141437475 141456933 - MGP_129S1SvImJ_P0080678 Arhgdib protein_coding protein_coding MGP_129S1SvImJ_T0080680.1 MGP_129S1SvImJ_G0031432.1 mouse_genomes_project 6 141437818 141457095 - MGP_129S1SvImJ_P0080680 Arhgdib protein_coding protein_coding MGP_129S1SvImJ_T0080681.1 MGP_129S1SvImJ_G0031432.1 mouse_genomes_project 6 141438028 141457064 - MGP_129S1SvImJ_P0080681 Arhgdib protein_coding protein_coding MGP_129S1SvImJ_T0080682.1 MGP_129S1SvImJ_G0031432.1 mouse_genomes_project 6 141448771 141454732 - MGP_129S1SvImJ_P0080682 Arhgdib protein_coding protein_coding MGP_129S1SvImJ_T0076253.1 MGP_129S1SvImJ_G0030448.1 mouse_genomes_project 6 5169461 5176888 - MGP_129S1SvImJ_P0076253 Rpa3 protein_coding protein_coding MGP_129S1SvImJ_T0076254.1 MGP_129S1SvImJ_G0030448.1 mouse_genomes_project 6 5174959 5176855 - Rpa3 protein_coding retained_intron MGP_129S1SvImJ_T0015589.1 MGP_129S1SvImJ_G0013678.1 mouse_genomes_project 6 124519075 124519463 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079240.1 MGP_129S1SvImJ_G0031112.1 mouse_genomes_project 6 115560392 115591307 + Setd5 protein_coding retained_intron MGP_129S1SvImJ_T0079241.1 MGP_129S1SvImJ_G0031112.1 mouse_genomes_project 6 115560392 115641364 + MGP_129S1SvImJ_P0079241 Setd5 protein_coding protein_coding MGP_129S1SvImJ_T0079242.1 MGP_129S1SvImJ_G0031112.1 mouse_genomes_project 6 115560588 115590065 + Setd5 protein_coding processed_transcript MGP_129S1SvImJ_T0079243.1 MGP_129S1SvImJ_G0031112.1 mouse_genomes_project 6 115560629 115601559 + Setd5 protein_coding processed_transcript MGP_129S1SvImJ_T0079244.1 MGP_129S1SvImJ_G0031112.1 mouse_genomes_project 6 115560666 115641353 + MGP_129S1SvImJ_P0079244 Setd5 protein_coding protein_coding MGP_129S1SvImJ_T0079245.1 MGP_129S1SvImJ_G0031112.1 mouse_genomes_project 6 115588680 115622219 + Setd5 protein_coding processed_transcript MGP_129S1SvImJ_T0079246.1 MGP_129S1SvImJ_G0031112.1 mouse_genomes_project 6 115588782 115641364 + MGP_129S1SvImJ_P0079246 Setd5 protein_coding protein_coding MGP_129S1SvImJ_T0079247.1 MGP_129S1SvImJ_G0031112.1 mouse_genomes_project 6 115592618 115601873 + Setd5 protein_coding retained_intron MGP_129S1SvImJ_T0079248.1 MGP_129S1SvImJ_G0031112.1 mouse_genomes_project 6 115593270 115639104 + MGP_129S1SvImJ_P0079248 Setd5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0079249.1 MGP_129S1SvImJ_G0031112.1 mouse_genomes_project 6 115593610 115639469 + Setd5 protein_coding retained_intron MGP_129S1SvImJ_T0079250.1 MGP_129S1SvImJ_G0031112.1 mouse_genomes_project 6 115594162 115597435 + Setd5 protein_coding retained_intron MGP_129S1SvImJ_T0079251.1 MGP_129S1SvImJ_G0031112.1 mouse_genomes_project 6 115594162 115601528 + Setd5 protein_coding retained_intron MGP_129S1SvImJ_T0079252.1 MGP_129S1SvImJ_G0031112.1 mouse_genomes_project 6 115609294 115614328 + Setd5 protein_coding retained_intron MGP_129S1SvImJ_T0079253.1 MGP_129S1SvImJ_G0031112.1 mouse_genomes_project 6 115611694 115639490 + Setd5 protein_coding retained_intron MGP_129S1SvImJ_T0079254.1 MGP_129S1SvImJ_G0031112.1 mouse_genomes_project 6 115612626 115622455 + Setd5 protein_coding processed_transcript MGP_129S1SvImJ_T0102663.1 MGP_129S1SvImJ_G0040496.1 mouse_genomes_project 6 137842795 137844816 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002749.1 MGP_129S1SvImJ_G0002624.1 mouse_genomes_project 6 39554608 39555010 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0015398.1 MGP_129S1SvImJ_G0013487.1 mouse_genomes_project 6 62996091 62996782 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078951.1 MGP_129S1SvImJ_G0031052.1 mouse_genomes_project 6 93503102 93510056 + Ccdc174 protein_coding retained_intron MGP_129S1SvImJ_T0078952.1 MGP_129S1SvImJ_G0031052.1 mouse_genomes_project 6 93503102 93524911 + MGP_129S1SvImJ_P0078952 Ccdc174 protein_coding protein_coding MGP_129S1SvImJ_T0078953.1 MGP_129S1SvImJ_G0031052.1 mouse_genomes_project 6 93503102 93524911 + MGP_129S1SvImJ_P0078953 Ccdc174 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078954.1 MGP_129S1SvImJ_G0031052.1 mouse_genomes_project 6 93503121 93505575 + Ccdc174 protein_coding retained_intron MGP_129S1SvImJ_T0078955.1 MGP_129S1SvImJ_G0031052.1 mouse_genomes_project 6 93503124 93513384 + Ccdc174 protein_coding retained_intron MGP_129S1SvImJ_T0078956.1 MGP_129S1SvImJ_G0031052.1 mouse_genomes_project 6 93517414 93520361 + Ccdc174 protein_coding retained_intron MGP_129S1SvImJ_T0078957.1 MGP_129S1SvImJ_G0031052.1 mouse_genomes_project 6 93517871 93520407 + Ccdc174 protein_coding retained_intron MGP_129S1SvImJ_T0079516.1 MGP_129S1SvImJ_G0031159.1 mouse_genomes_project 6 118578342 118586623 + MGP_129S1SvImJ_P0079516 Rho protein_coding protein_coding MGP_129S1SvImJ_T0079517.1 MGP_129S1SvImJ_G0031159.1 mouse_genomes_project 6 118578519 118580698 + Rho protein_coding retained_intron MGP_129S1SvImJ_T0079518.1 MGP_129S1SvImJ_G0031159.1 mouse_genomes_project 6 118579151 118583308 + MGP_129S1SvImJ_P0079518 Rho protein_coding protein_coding MGP_129S1SvImJ_T0079519.1 MGP_129S1SvImJ_G0031159.1 mouse_genomes_project 6 118580940 118583553 + MGP_129S1SvImJ_P0079519 Rho protein_coding protein_coding MGP_129S1SvImJ_T0079520.1 MGP_129S1SvImJ_G0031159.1 mouse_genomes_project 6 118580971 118583673 + MGP_129S1SvImJ_P0079520 Rho protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079521.1 MGP_129S1SvImJ_G0031159.1 mouse_genomes_project 6 118581337 118582644 + Rho protein_coding retained_intron MGP_129S1SvImJ_T0079522.1 MGP_129S1SvImJ_G0031159.1 mouse_genomes_project 6 118581796 118582829 + Rho protein_coding retained_intron MGP_129S1SvImJ_T0076330.1 MGP_129S1SvImJ_G0030463.1 mouse_genomes_project 6 11839805 11886110 - MGP_129S1SvImJ_P0076330 Ppp1r3a protein_coding protein_coding MGP_129S1SvImJ_T0000347.1 MGP_129S1SvImJ_G0000289.1 mouse_genomes_project 6 70901406 70901708 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0076520.1 MGP_129S1SvImJ_G0030500.1 mouse_genomes_project 6 22353381 22364629 + MGP_129S1SvImJ_P0076520 Spam1 protein_coding protein_coding MGP_129S1SvImJ_T0076521.1 MGP_129S1SvImJ_G0030500.1 mouse_genomes_project 6 22353394 22364629 + MGP_129S1SvImJ_P0076521 Spam1 protein_coding protein_coding MGP_129S1SvImJ_T0076522.1 MGP_129S1SvImJ_G0030500.1 mouse_genomes_project 6 22353408 22360578 + Spam1 protein_coding retained_intron MGP_129S1SvImJ_T0076523.1 MGP_129S1SvImJ_G0030500.1 mouse_genomes_project 6 22359351 22364629 + MGP_129S1SvImJ_P0076523 Spam1 protein_coding protein_coding MGP_129S1SvImJ_T0079796.1 MGP_129S1SvImJ_G0031206.1 mouse_genomes_project 6 123405895 123429045 - MGP_129S1SvImJ_P0079796 Cecr5 protein_coding protein_coding MGP_129S1SvImJ_T0079797.1 MGP_129S1SvImJ_G0031206.1 mouse_genomes_project 6 123417587 123429030 - Cecr5 protein_coding retained_intron MGP_129S1SvImJ_T0079798.1 MGP_129S1SvImJ_G0031206.1 mouse_genomes_project 6 123418466 123429016 - Cecr5 protein_coding retained_intron MGP_129S1SvImJ_T0079799.1 MGP_129S1SvImJ_G0031206.1 mouse_genomes_project 6 123427693 123429028 - Cecr5 protein_coding retained_intron MGP_129S1SvImJ_T0077268.1 MGP_129S1SvImJ_G0030676.1 mouse_genomes_project 6 41895099 41918824 + MGP_129S1SvImJ_P0077268 Arhgef5 protein_coding protein_coding MGP_129S1SvImJ_T0077269.1 MGP_129S1SvImJ_G0030676.1 mouse_genomes_project 6 41904014 41918823 + MGP_129S1SvImJ_P0077269 Arhgef5 protein_coding protein_coding MGP_129S1SvImJ_T0077270.1 MGP_129S1SvImJ_G0030676.1 mouse_genomes_project 6 41906441 41909424 + Arhgef5 protein_coding retained_intron MGP_129S1SvImJ_T0077271.1 MGP_129S1SvImJ_G0030676.1 mouse_genomes_project 6 41906550 41916699 + Arhgef5 protein_coding retained_intron MGP_129S1SvImJ_T0077272.1 MGP_129S1SvImJ_G0030676.1 mouse_genomes_project 6 41908960 41918820 + Arhgef5 protein_coding retained_intron MGP_129S1SvImJ_T0077273.1 MGP_129S1SvImJ_G0030676.1 mouse_genomes_project 6 41910493 41913070 + Arhgef5 protein_coding retained_intron MGP_129S1SvImJ_T0077274.1 MGP_129S1SvImJ_G0030676.1 mouse_genomes_project 6 41912117 41918819 + Arhgef5 protein_coding retained_intron MGP_129S1SvImJ_T0077275.1 MGP_129S1SvImJ_G0030676.1 mouse_genomes_project 6 41912385 41913519 + Arhgef5 protein_coding retained_intron MGP_129S1SvImJ_T0102657.1 MGP_129S1SvImJ_G0040490.1 mouse_genomes_project 6 137097790 137098724 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0098375.1 MGP_129S1SvImJ_G0036460.1 mouse_genomes_project 6 51471255 51471702 - pseudogene pseudogene MGP_129S1SvImJ_T0080715.1 MGP_129S1SvImJ_G0031438.1 mouse_genomes_project 6 142318015 142349766 + Dera protein_coding retained_intron MGP_129S1SvImJ_T0080716.1 MGP_129S1SvImJ_G0031438.1 mouse_genomes_project 6 142318015 142324364 + Dera protein_coding processed_transcript MGP_129S1SvImJ_T0080717.1 MGP_129S1SvImJ_G0031438.1 mouse_genomes_project 6 142318025 142407999 + MGP_129S1SvImJ_P0080717 Dera protein_coding protein_coding MGP_129S1SvImJ_T0080718.1 MGP_129S1SvImJ_G0031438.1 mouse_genomes_project 6 142318027 142408442 + MGP_129S1SvImJ_P0080718 Dera protein_coding protein_coding MGP_129S1SvImJ_T0080719.1 MGP_129S1SvImJ_G0031438.1 mouse_genomes_project 6 142318045 142430832 + MGP_129S1SvImJ_P0080719 Dera protein_coding protein_coding MGP_129S1SvImJ_T0080720.1 MGP_129S1SvImJ_G0031438.1 mouse_genomes_project 6 142318060 142327544 + Dera protein_coding processed_transcript MGP_129S1SvImJ_T0080721.1 MGP_129S1SvImJ_G0031438.1 mouse_genomes_project 6 142318084 142407978 + MGP_129S1SvImJ_P0080721 Dera protein_coding protein_coding MGP_129S1SvImJ_T0080722.1 MGP_129S1SvImJ_G0031438.1 mouse_genomes_project 6 142324067 142324365 + Dera protein_coding TEC MGP_129S1SvImJ_T0080723.1 MGP_129S1SvImJ_G0031438.1 mouse_genomes_project 6 142335625 142350595 + Dera protein_coding processed_transcript MGP_129S1SvImJ_T0080724.1 MGP_129S1SvImJ_G0031438.1 mouse_genomes_project 6 142341243 142342911 + Dera protein_coding retained_intron MGP_129S1SvImJ_T0080725.1 MGP_129S1SvImJ_G0031438.1 mouse_genomes_project 6 142344084 142408025 + MGP_129S1SvImJ_P0080725 Dera protein_coding protein_coding MGP_129S1SvImJ_T0080726.1 MGP_129S1SvImJ_G0031438.1 mouse_genomes_project 6 142365660 142378343 + Dera protein_coding processed_transcript MGP_129S1SvImJ_T0080727.1 MGP_129S1SvImJ_G0031438.1 mouse_genomes_project 6 142401092 142430304 + MGP_129S1SvImJ_P0080727 Dera protein_coding protein_coding MGP_129S1SvImJ_T0080728.1 MGP_129S1SvImJ_G0031438.1 mouse_genomes_project 6 142406180 142408628 + Dera protein_coding retained_intron MGP_129S1SvImJ_T0080729.1 MGP_129S1SvImJ_G0031438.1 mouse_genomes_project 6 142407392 142416667 + MGP_129S1SvImJ_P0080729 Dera protein_coding protein_coding MGP_129S1SvImJ_T0077616.1 MGP_129S1SvImJ_G0030757.1 mouse_genomes_project 6 53206028 53315120 - MGP_129S1SvImJ_P0077616 Cpvl protein_coding protein_coding MGP_129S1SvImJ_T0077617.1 MGP_129S1SvImJ_G0030757.1 mouse_genomes_project 6 53206128 53315111 - MGP_129S1SvImJ_P0077617 Cpvl protein_coding protein_coding MGP_129S1SvImJ_T0077618.1 MGP_129S1SvImJ_G0030757.1 mouse_genomes_project 6 53206128 53315111 - MGP_129S1SvImJ_P0077618 Cpvl protein_coding protein_coding MGP_129S1SvImJ_T0076822.1 MGP_129S1SvImJ_G0030551.1 mouse_genomes_project 6 30127854 30588460 - MGP_129S1SvImJ_P0076822 Plxna4 protein_coding protein_coding MGP_129S1SvImJ_T0076823.1 MGP_129S1SvImJ_G0030551.1 mouse_genomes_project 6 30209983 30211410 - Plxna4 protein_coding retained_intron MGP_129S1SvImJ_T0008661.1 MGP_129S1SvImJ_G0007003.1 mouse_genomes_project 6 85642732 85643178 + 4930504D19Rik lincRNA lincRNA MGP_129S1SvImJ_T0002134.1 MGP_129S1SvImJ_G0002047.1 mouse_genomes_project 6 105712634 105714883 + TEC TEC MGP_129S1SvImJ_T0080691.1 MGP_129S1SvImJ_G0031435.1 mouse_genomes_project 6 141776644 141919613 + Ptpro protein_coding retained_intron MGP_129S1SvImJ_T0080692.1 MGP_129S1SvImJ_G0031435.1 mouse_genomes_project 6 141776659 142004595 + MGP_129S1SvImJ_P0080692 Ptpro protein_coding protein_coding MGP_129S1SvImJ_T0080693.1 MGP_129S1SvImJ_G0031435.1 mouse_genomes_project 6 141776790 142004595 + MGP_129S1SvImJ_P0080693 Ptpro protein_coding protein_coding MGP_129S1SvImJ_T0080694.1 MGP_129S1SvImJ_G0031435.1 mouse_genomes_project 6 141953524 142004601 + MGP_129S1SvImJ_P0080694 Ptpro protein_coding protein_coding MGP_129S1SvImJ_T0080695.1 MGP_129S1SvImJ_G0031435.1 mouse_genomes_project 6 141953540 142004601 + MGP_129S1SvImJ_P0080695 Ptpro protein_coding protein_coding MGP_129S1SvImJ_T0080696.1 MGP_129S1SvImJ_G0031435.1 mouse_genomes_project 6 141953562 141957084 + Ptpro protein_coding retained_intron MGP_129S1SvImJ_T0080697.1 MGP_129S1SvImJ_G0031435.1 mouse_genomes_project 6 141994014 142003672 + Ptpro protein_coding processed_transcript MGP_129S1SvImJ_T0080698.1 MGP_129S1SvImJ_G0031435.1 mouse_genomes_project 6 141995350 142003990 + Ptpro protein_coding processed_transcript MGP_129S1SvImJ_T0079714.1 MGP_129S1SvImJ_G0031196.1 mouse_genomes_project 6 122391176 122686827 - MGP_129S1SvImJ_P0079714 Erc1 protein_coding protein_coding MGP_129S1SvImJ_T0079715.1 MGP_129S1SvImJ_G0031196.1 mouse_genomes_project 6 122391184 122662437 - MGP_129S1SvImJ_P0079715 Erc1 protein_coding protein_coding MGP_129S1SvImJ_T0079716.1 MGP_129S1SvImJ_G0031196.1 mouse_genomes_project 6 122393010 122686776 - MGP_129S1SvImJ_P0079716 Erc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079717.1 MGP_129S1SvImJ_G0031196.1 mouse_genomes_project 6 122394088 122686736 - MGP_129S1SvImJ_P0079717 Erc1 protein_coding protein_coding MGP_129S1SvImJ_T0079718.1 MGP_129S1SvImJ_G0031196.1 mouse_genomes_project 6 122394937 122686792 - MGP_129S1SvImJ_P0079718 Erc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079719.1 MGP_129S1SvImJ_G0031196.1 mouse_genomes_project 6 122395372 122575845 - MGP_129S1SvImJ_P0079719 Erc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079720.1 MGP_129S1SvImJ_G0031196.1 mouse_genomes_project 6 122395607 122686811 - MGP_129S1SvImJ_P0079720 Erc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079721.1 MGP_129S1SvImJ_G0031196.1 mouse_genomes_project 6 122395677 122686844 - MGP_129S1SvImJ_P0079721 Erc1 protein_coding protein_coding MGP_129S1SvImJ_T0079722.1 MGP_129S1SvImJ_G0031196.1 mouse_genomes_project 6 122395892 122686766 - MGP_129S1SvImJ_P0079722 Erc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079723.1 MGP_129S1SvImJ_G0031196.1 mouse_genomes_project 6 122439377 122444205 - Erc1 protein_coding retained_intron MGP_129S1SvImJ_T0079724.1 MGP_129S1SvImJ_G0031196.1 mouse_genomes_project 6 122440522 122663049 - MGP_129S1SvImJ_P0079724 Erc1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0079725.1 MGP_129S1SvImJ_G0031196.1 mouse_genomes_project 6 122551517 122633035 - Erc1 protein_coding processed_transcript MGP_129S1SvImJ_T0079726.1 MGP_129S1SvImJ_G0031196.1 mouse_genomes_project 6 122606235 122686779 - MGP_129S1SvImJ_P0079726 Erc1 protein_coding protein_coding MGP_129S1SvImJ_T0079727.1 MGP_129S1SvImJ_G0031196.1 mouse_genomes_project 6 122661195 122663669 - Erc1 protein_coding retained_intron MGP_129S1SvImJ_T0079973.1 MGP_129S1SvImJ_G0031247.1 mouse_genomes_project 6 126683657 126718576 - MGP_129S1SvImJ_P0079973 protein_coding protein_coding MGP_129S1SvImJ_T0015350.1 MGP_129S1SvImJ_G0013439.1 mouse_genomes_project 6 46886926 46887800 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077960.1 MGP_129S1SvImJ_G0030856.1 mouse_genomes_project 6 71792257 71809204 + MGP_129S1SvImJ_P0077960 Cd8b1 protein_coding protein_coding MGP_129S1SvImJ_T0008650.1 MGP_129S1SvImJ_G0006997.1 mouse_genomes_project 6 82956143 82963583 + lincRNA lincRNA MGP_129S1SvImJ_T0008652.1 MGP_129S1SvImJ_G0006997.1 mouse_genomes_project 6 82962619 82964161 + lincRNA lincRNA MGP_129S1SvImJ_T0015365.1 MGP_129S1SvImJ_G0013454.1 mouse_genomes_project 6 48778900 48779173 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079980.1 MGP_129S1SvImJ_G0031254.1 mouse_genomes_project 6 127564145 127590362 + MGP_129S1SvImJ_P0079980 Cd163 protein_coding protein_coding MGP_129S1SvImJ_T0079981.1 MGP_129S1SvImJ_G0031254.1 mouse_genomes_project 6 127564189 127590362 + MGP_129S1SvImJ_P0079981 Cd163 protein_coding protein_coding MGP_129S1SvImJ_T0079982.1 MGP_129S1SvImJ_G0031254.1 mouse_genomes_project 6 127579573 127590354 + Cd163 protein_coding retained_intron MGP_129S1SvImJ_T0015404.1 MGP_129S1SvImJ_G0013493.1 mouse_genomes_project 6 65054451 65054883 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015593.1 MGP_129S1SvImJ_G0013682.1 mouse_genomes_project 6 125058175 125058307 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000335.1 MGP_129S1SvImJ_G0000277.1 mouse_genomes_project 6 69842008 69842326 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0077000.1 MGP_129S1SvImJ_G0030586.1 mouse_genomes_project 6 36745865 36833690 + MGP_129S1SvImJ_P0077000 Ubn2 protein_coding protein_coding MGP_129S1SvImJ_T0077001.1 MGP_129S1SvImJ_G0030586.1 mouse_genomes_project 6 36746088 36823783 + MGP_129S1SvImJ_P0077001 Ubn2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0077002.1 MGP_129S1SvImJ_G0030586.1 mouse_genomes_project 6 36746088 36822053 + MGP_129S1SvImJ_P0077002 Ubn2 protein_coding protein_coding MGP_129S1SvImJ_T0077003.1 MGP_129S1SvImJ_G0030586.1 mouse_genomes_project 6 36753415 36845692 + MGP_129S1SvImJ_P0077003 Ubn2 protein_coding protein_coding MGP_129S1SvImJ_T0077004.1 MGP_129S1SvImJ_G0030586.1 mouse_genomes_project 6 36780559 36781339 + Ubn2 protein_coding retained_intron MGP_129S1SvImJ_T0077005.1 MGP_129S1SvImJ_G0030586.1 mouse_genomes_project 6 36781497 36803667 + Ubn2 protein_coding retained_intron MGP_129S1SvImJ_T0077006.1 MGP_129S1SvImJ_G0030586.1 mouse_genomes_project 6 36801961 36806273 + Ubn2 protein_coding retained_intron MGP_129S1SvImJ_T0077007.1 MGP_129S1SvImJ_G0030586.1 mouse_genomes_project 6 36802059 36807157 + Ubn2 protein_coding processed_transcript MGP_129S1SvImJ_T0077008.1 MGP_129S1SvImJ_G0030586.1 mouse_genomes_project 6 36802905 36822053 + Ubn2 protein_coding retained_intron MGP_129S1SvImJ_T0077009.1 MGP_129S1SvImJ_G0030586.1 mouse_genomes_project 6 36810493 36845726 + MGP_129S1SvImJ_P0077009 Ubn2 protein_coding protein_coding MGP_129S1SvImJ_T0101240.1 MGP_129S1SvImJ_G0039307.1 mouse_genomes_project 6 42523516 42523647 + Gm22939 snoRNA snoRNA MGP_129S1SvImJ_T0076435.1 MGP_129S1SvImJ_G0030477.1 mouse_genomes_project 6 16165562 16171061 + MGP_129S1SvImJ_P0076435 Lsm8 protein_coding protein_coding MGP_129S1SvImJ_T0076436.1 MGP_129S1SvImJ_G0030477.1 mouse_genomes_project 6 16165624 16172760 + Lsm8 protein_coding retained_intron MGP_129S1SvImJ_T0076437.1 MGP_129S1SvImJ_G0030477.1 mouse_genomes_project 6 16165639 16167406 + Lsm8 protein_coding retained_intron MGP_129S1SvImJ_T0076438.1 MGP_129S1SvImJ_G0030477.1 mouse_genomes_project 6 16165651 16170756 + MGP_129S1SvImJ_P0076438 Lsm8 protein_coding protein_coding MGP_129S1SvImJ_T0004934.1 MGP_129S1SvImJ_G0004238.1 mouse_genomes_project 6 19321132 19322198 + Gm42582 antisense antisense MGP_129S1SvImJ_T0002158.1 MGP_129S1SvImJ_G0002070.1 mouse_genomes_project 6 124132483 124133992 - TEC TEC MGP_129S1SvImJ_T0080329.1 MGP_129S1SvImJ_G0031319.1 mouse_genomes_project 6 131823456 131874354 - MGP_129S1SvImJ_P0080329 Tead4 protein_coding protein_coding MGP_129S1SvImJ_T0080330.1 MGP_129S1SvImJ_G0031319.1 mouse_genomes_project 6 131870050 131900009 - MGP_129S1SvImJ_P0080330 Tead4 protein_coding protein_coding MGP_129S1SvImJ_T0080331.1 MGP_129S1SvImJ_G0031319.1 mouse_genomes_project 6 131870100 131899924 - MGP_129S1SvImJ_P0080331 Tead4 protein_coding protein_coding MGP_129S1SvImJ_T0076145.1 MGP_129S1SvImJ_G0030423.1 mouse_genomes_project 6 695844 702146 - MGP_129S1SvImJ_P0076145 Tfpi2 protein_coding protein_coding MGP_129S1SvImJ_T0076146.1 MGP_129S1SvImJ_G0030423.1 mouse_genomes_project 6 696634 722455 - MGP_129S1SvImJ_P0076146 Tfpi2 protein_coding protein_coding MGP_129S1SvImJ_T0076147.1 MGP_129S1SvImJ_G0030423.1 mouse_genomes_project 6 698793 722516 - MGP_129S1SvImJ_P0076147 Tfpi2 protein_coding protein_coding MGP_129S1SvImJ_T0008683.1 MGP_129S1SvImJ_G0007019.1 mouse_genomes_project 6 92010824 92012045 + Gm44421 lincRNA lincRNA MGP_129S1SvImJ_T0002135.1 MGP_129S1SvImJ_G0002048.1 mouse_genomes_project 6 105723007 105724501 + TEC TEC MGP_129S1SvImJ_T0008534.1 MGP_129S1SvImJ_G0006913.1 mouse_genomes_project 6 23546542 23596275 + Gm20756 lincRNA lincRNA MGP_129S1SvImJ_T0008535.1 MGP_129S1SvImJ_G0006913.1 mouse_genomes_project 6 23572610 23576285 + Gm20756 lincRNA lincRNA MGP_129S1SvImJ_T0099984.1 MGP_129S1SvImJ_G0038051.1 mouse_genomes_project 6 16967274 16967380 + Gm22828 snRNA snRNA MGP_129S1SvImJ_T0080522.1 MGP_129S1SvImJ_G0031384.1 mouse_genomes_project 6 136838334 136839367 - MGP_129S1SvImJ_P0080522 Tas2r115 protein_coding protein_coding MGP_129S1SvImJ_T0080265.1 MGP_129S1SvImJ_G0031304.1 mouse_genomes_project 6 130165213 130197152 - MGP_129S1SvImJ_P0080265 Kcna6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080266.1 MGP_129S1SvImJ_G0031304.1 mouse_genomes_project 6 130165215 130193301 - Kcna6 protein_coding processed_transcript MGP_129S1SvImJ_T0080267.1 MGP_129S1SvImJ_G0031304.1 mouse_genomes_project 6 130165216 130197164 - MGP_129S1SvImJ_P0080267 Kcna6 protein_coding protein_coding MGP_129S1SvImJ_T0080268.1 MGP_129S1SvImJ_G0031304.1 mouse_genomes_project 6 130193177 130196641 - MGP_129S1SvImJ_P0080268 Kcna6 protein_coding protein_coding MGP_129S1SvImJ_T0015418.1 MGP_129S1SvImJ_G0013507.1 mouse_genomes_project 6 66347203 66347369 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015540.1 MGP_129S1SvImJ_G0013629.1 mouse_genomes_project 6 106101161 106101541 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008671.1 MGP_129S1SvImJ_G0007012.1 mouse_genomes_project 6 89141057 89142395 + Gm43904 lincRNA lincRNA MGP_129S1SvImJ_T0077317.1 MGP_129S1SvImJ_G0030684.1 mouse_genomes_project 6 46725104 46737960 - MGP_129S1SvImJ_P0077317 Zfp786 protein_coding protein_coding MGP_129S1SvImJ_T0077318.1 MGP_129S1SvImJ_G0030684.1 mouse_genomes_project 6 46727496 46737661 - Zfp786 protein_coding processed_transcript MGP_129S1SvImJ_T0077319.1 MGP_129S1SvImJ_G0030684.1 mouse_genomes_project 6 46733992 46737597 - Zfp786 protein_coding retained_intron MGP_129S1SvImJ_T0076858.1 MGP_129S1SvImJ_G0030558.1 mouse_genomes_project 6 32463946 32477476 + MGP_129S1SvImJ_P0076858 Akr1b10 protein_coding protein_coding MGP_129S1SvImJ_T0076859.1 MGP_129S1SvImJ_G0030558.1 mouse_genomes_project 6 32463977 32470130 + Akr1b10 protein_coding retained_intron MGP_129S1SvImJ_T0076860.1 MGP_129S1SvImJ_G0030558.1 mouse_genomes_project 6 32464009 32477274 + MGP_129S1SvImJ_P0076860 Akr1b10 protein_coding protein_coding MGP_129S1SvImJ_T0076861.1 MGP_129S1SvImJ_G0030558.1 mouse_genomes_project 6 32464009 32477473 + MGP_129S1SvImJ_P0076861 Akr1b10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076862.1 MGP_129S1SvImJ_G0030558.1 mouse_genomes_project 6 32470149 32471118 + Akr1b10 protein_coding retained_intron MGP_129S1SvImJ_T0076863.1 MGP_129S1SvImJ_G0030558.1 mouse_genomes_project 6 32471981 32473506 + Akr1b10 protein_coding retained_intron MGP_129S1SvImJ_T0078071.1 MGP_129S1SvImJ_G0030876.1 mouse_genomes_project 6 72966942 72983338 + MGP_129S1SvImJ_P0078071 Ggcx protein_coding protein_coding MGP_129S1SvImJ_T0078072.1 MGP_129S1SvImJ_G0030876.1 mouse_genomes_project 6 72966975 72983034 + MGP_129S1SvImJ_P0078072 Ggcx protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078073.1 MGP_129S1SvImJ_G0030876.1 mouse_genomes_project 6 72970489 72982875 + MGP_129S1SvImJ_P0078073 Ggcx protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078074.1 MGP_129S1SvImJ_G0030876.1 mouse_genomes_project 6 72970540 72976673 + MGP_129S1SvImJ_P0078074 Ggcx protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078075.1 MGP_129S1SvImJ_G0030876.1 mouse_genomes_project 6 72979249 72981891 + MGP_129S1SvImJ_P0078075 Ggcx protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0008635.1 MGP_129S1SvImJ_G0006982.1 mouse_genomes_project 6 71618555 71619802 + Gm44427 lincRNA lincRNA MGP_129S1SvImJ_T0000150.1 MGP_129S1SvImJ_G0000115.1 mouse_genomes_project 6 68021370 68021850 + MGP_129S1SvImJ_P0000150 Igkv11-125 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000151.1 MGP_129S1SvImJ_G0000115.1 mouse_genomes_project 6 68021370 68021850 + MGP_129S1SvImJ_P0000151 Igkv11-125 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0015533.1 MGP_129S1SvImJ_G0013622.1 mouse_genomes_project 6 103025546 103027204 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011692.1 MGP_129S1SvImJ_G0009808.1 mouse_genomes_project 6 146470654 146470965 - Gm23069 misc_RNA misc_RNA MGP_129S1SvImJ_T0101246.1 MGP_129S1SvImJ_G0039313.1 mouse_genomes_project 6 54367697 54367826 + Gm24230 snoRNA snoRNA MGP_129S1SvImJ_T0002515.1 MGP_129S1SvImJ_G0002423.1 mouse_genomes_project 6 40045594 40048741 + MGP_129S1SvImJ_P0002515 Trbc1 TR_C_gene TR_C_gene MGP_129S1SvImJ_T0079006.1 MGP_129S1SvImJ_G0031064.1 mouse_genomes_project 6 96261682 96371950 + MGP_129S1SvImJ_P0079006 Slc25a26 protein_coding protein_coding MGP_129S1SvImJ_T0079007.1 MGP_129S1SvImJ_G0031064.1 mouse_genomes_project 6 96261684 96371333 + MGP_129S1SvImJ_P0079007 Slc25a26 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079008.1 MGP_129S1SvImJ_G0031064.1 mouse_genomes_project 6 96261720 96371950 + MGP_129S1SvImJ_P0079008 Slc25a26 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079009.1 MGP_129S1SvImJ_G0031064.1 mouse_genomes_project 6 96261900 96272171 + Slc25a26 protein_coding processed_transcript MGP_129S1SvImJ_T0079010.1 MGP_129S1SvImJ_G0031064.1 mouse_genomes_project 6 96268894 96361372 + MGP_129S1SvImJ_P0079010 Slc25a26 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079011.1 MGP_129S1SvImJ_G0031064.1 mouse_genomes_project 6 96296773 96371141 + Slc25a26 protein_coding processed_transcript MGP_129S1SvImJ_T0079012.1 MGP_129S1SvImJ_G0031064.1 mouse_genomes_project 6 96343039 96370861 + Slc25a26 protein_coding processed_transcript MGP_129S1SvImJ_T0078925.1 MGP_129S1SvImJ_G0031048.1 mouse_genomes_project 6 93089115 93115666 - MGP_129S1SvImJ_P0078925 Xpc protein_coding protein_coding MGP_129S1SvImJ_T0078926.1 MGP_129S1SvImJ_G0031048.1 mouse_genomes_project 6 93092083 93115573 - MGP_129S1SvImJ_P0078926 Xpc protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078927.1 MGP_129S1SvImJ_G0031048.1 mouse_genomes_project 6 93106694 93115662 - MGP_129S1SvImJ_P0078927 Xpc protein_coding protein_coding MGP_129S1SvImJ_T0080470.1 MGP_129S1SvImJ_G0031355.1 mouse_genomes_project 6 133310194 133314420 - MGP_129S1SvImJ_P0080470 Klrc3 protein_coding protein_coding MGP_129S1SvImJ_T0080471.1 MGP_129S1SvImJ_G0031355.1 mouse_genomes_project 6 133310194 133314420 - MGP_129S1SvImJ_P0080471 Klrc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080472.1 MGP_129S1SvImJ_G0031355.1 mouse_genomes_project 6 133310215 133314420 - MGP_129S1SvImJ_P0080472 Klrc3 protein_coding protein_coding MGP_129S1SvImJ_T0076151.1 MGP_129S1SvImJ_G0030426.1 mouse_genomes_project 6 818718 825368 - protein_coding retained_intron MGP_129S1SvImJ_T0076152.1 MGP_129S1SvImJ_G0030426.1 mouse_genomes_project 6 819895 825326 - protein_coding processed_transcript MGP_129S1SvImJ_T0076153.1 MGP_129S1SvImJ_G0030426.1 mouse_genomes_project 6 819918 825326 - protein_coding processed_transcript MGP_129S1SvImJ_T0002136.1 MGP_129S1SvImJ_G0002049.1 mouse_genomes_project 6 110730757 110732982 - TEC TEC MGP_129S1SvImJ_T0079815.1 MGP_129S1SvImJ_G0031210.1 mouse_genomes_project 6 123751958 123785775 + Bcl2l13 protein_coding retained_intron MGP_129S1SvImJ_T0079816.1 MGP_129S1SvImJ_G0031210.1 mouse_genomes_project 6 123751958 123783523 + MGP_129S1SvImJ_P0079816 Bcl2l13 protein_coding protein_coding MGP_129S1SvImJ_T0079817.1 MGP_129S1SvImJ_G0031210.1 mouse_genomes_project 6 123751972 123794575 + MGP_129S1SvImJ_P0079817 Bcl2l13 protein_coding protein_coding MGP_129S1SvImJ_T0079818.1 MGP_129S1SvImJ_G0031210.1 mouse_genomes_project 6 123751984 123811168 + MGP_129S1SvImJ_P0079818 Bcl2l13 protein_coding protein_coding MGP_129S1SvImJ_T0079691.1 MGP_129S1SvImJ_G0031191.1 mouse_genomes_project 6 122018514 122140109 + MGP_129S1SvImJ_P0079691 Cacna2d4 protein_coding protein_coding MGP_129S1SvImJ_T0079692.1 MGP_129S1SvImJ_G0031191.1 mouse_genomes_project 6 122018515 122062815 + Cacna2d4 protein_coding retained_intron MGP_129S1SvImJ_T0079693.1 MGP_129S1SvImJ_G0031191.1 mouse_genomes_project 6 122018583 122138161 + MGP_129S1SvImJ_P0079693 Cacna2d4 protein_coding protein_coding MGP_129S1SvImJ_T0079694.1 MGP_129S1SvImJ_G0031191.1 mouse_genomes_project 6 122031793 122089299 + Cacna2d4 protein_coding processed_transcript MGP_129S1SvImJ_T0079695.1 MGP_129S1SvImJ_G0031191.1 mouse_genomes_project 6 122034225 122057672 + Cacna2d4 protein_coding processed_transcript MGP_129S1SvImJ_T0079696.1 MGP_129S1SvImJ_G0031191.1 mouse_genomes_project 6 122051605 122056970 + Cacna2d4 protein_coding processed_transcript MGP_129S1SvImJ_T0079697.1 MGP_129S1SvImJ_G0031191.1 mouse_genomes_project 6 122051806 122057013 + Cacna2d4 protein_coding retained_intron MGP_129S1SvImJ_T0079702.1 MGP_129S1SvImJ_G0031191.1 mouse_genomes_project 6 122118657 122131743 + Cacna2d4 protein_coding processed_transcript MGP_129S1SvImJ_T0079703.1 MGP_129S1SvImJ_G0031191.1 mouse_genomes_project 6 122118690 122125985 + Cacna2d4 protein_coding retained_intron MGP_129S1SvImJ_T0079704.1 MGP_129S1SvImJ_G0031191.1 mouse_genomes_project 6 122120410 122134934 + Cacna2d4 protein_coding processed_transcript MGP_129S1SvImJ_T0079705.1 MGP_129S1SvImJ_G0031191.1 mouse_genomes_project 6 122122776 122137838 + MGP_129S1SvImJ_P0079705 Cacna2d4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0079175.1 MGP_129S1SvImJ_G0031098.1 mouse_genomes_project 6 110326162 110338806 + MGP_129S1SvImJ_P0079175 Setmar protein_coding protein_coding MGP_129S1SvImJ_T0079176.1 MGP_129S1SvImJ_G0031098.1 mouse_genomes_project 6 110326179 110338806 + MGP_129S1SvImJ_P0079176 Setmar protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0011678.1 MGP_129S1SvImJ_G0009794.1 mouse_genomes_project 6 84736468 84736662 + Gm27893 misc_RNA misc_RNA MGP_129S1SvImJ_T0015499.1 MGP_129S1SvImJ_G0013588.1 mouse_genomes_project 6 87164851 87165695 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005134.1 MGP_129S1SvImJ_G0004382.1 mouse_genomes_project 6 143179876 143201335 + B230110G15Rik antisense antisense MGP_129S1SvImJ_T0001941.1 MGP_129S1SvImJ_G0001854.1 mouse_genomes_project 6 4286939 4289617 + TEC TEC MGP_129S1SvImJ_T0008589.1 MGP_129S1SvImJ_G0006946.1 mouse_genomes_project 6 46441727 46446955 + Gm26625 lincRNA lincRNA MGP_129S1SvImJ_T0080170.1 MGP_129S1SvImJ_G0031285.1 mouse_genomes_project 6 128422182 128460379 + MGP_129S1SvImJ_P0080170 Chd4 protein_coding protein_coding MGP_129S1SvImJ_T0080171.1 MGP_129S1SvImJ_G0031285.1 mouse_genomes_project 6 128422182 128460373 + MGP_129S1SvImJ_P0080171 Chd4 protein_coding protein_coding MGP_129S1SvImJ_T0080172.1 MGP_129S1SvImJ_G0031285.1 mouse_genomes_project 6 128422363 128460379 + MGP_129S1SvImJ_P0080172 Chd4 protein_coding protein_coding MGP_129S1SvImJ_T0080173.1 MGP_129S1SvImJ_G0031285.1 mouse_genomes_project 6 128422378 128425730 + Chd4 protein_coding retained_intron MGP_129S1SvImJ_T0080174.1 MGP_129S1SvImJ_G0031285.1 mouse_genomes_project 6 128424927 128428879 + MGP_129S1SvImJ_P0080174 Chd4 protein_coding protein_coding MGP_129S1SvImJ_T0080175.1 MGP_129S1SvImJ_G0031285.1 mouse_genomes_project 6 128442008 128443089 + Chd4 protein_coding retained_intron MGP_129S1SvImJ_T0080176.1 MGP_129S1SvImJ_G0031285.1 mouse_genomes_project 6 128442036 128450404 + MGP_129S1SvImJ_P0080176 Chd4 protein_coding protein_coding MGP_129S1SvImJ_T0080177.1 MGP_129S1SvImJ_G0031285.1 mouse_genomes_project 6 128448228 128449327 + Chd4 protein_coding retained_intron MGP_129S1SvImJ_T0101280.1 MGP_129S1SvImJ_G0039347.1 mouse_genomes_project 6 126815451 126815583 + Gm25891 snoRNA snoRNA MGP_129S1SvImJ_T0004923.1 MGP_129S1SvImJ_G0004232.1 mouse_genomes_project 6 5352688 5376123 - Gm16043 antisense antisense MGP_129S1SvImJ_T0015579.1 MGP_129S1SvImJ_G0013668.1 mouse_genomes_project 6 120172997 120173418 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000312.1 MGP_129S1SvImJ_G0000254.1 mouse_genomes_project 6 68539905 68540700 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0008788.1 MGP_129S1SvImJ_G0007099.1 mouse_genomes_project 6 152231503 152258901 + E330012B07Rik lincRNA lincRNA MGP_129S1SvImJ_T0008789.1 MGP_129S1SvImJ_G0007099.1 mouse_genomes_project 6 152231521 152253105 + E330012B07Rik lincRNA lincRNA MGP_129S1SvImJ_T0008715.1 MGP_129S1SvImJ_G0007045.1 mouse_genomes_project 6 116271520 116272449 + Gm44053 lincRNA lincRNA MGP_129S1SvImJ_T0008533.1 MGP_129S1SvImJ_G0006912.1 mouse_genomes_project 6 19457737 19548898 - Gm26719 lincRNA lincRNA MGP_129S1SvImJ_T0078299.1 MGP_129S1SvImJ_G0030926.1 mouse_genomes_project 6 84172662 84207784 + MGP_129S1SvImJ_P0078299 Dctn1 protein_coding protein_coding MGP_129S1SvImJ_T0078300.1 MGP_129S1SvImJ_G0030926.1 mouse_genomes_project 6 84172693 84207785 + MGP_129S1SvImJ_P0078300 Dctn1 protein_coding protein_coding MGP_129S1SvImJ_T0078301.1 MGP_129S1SvImJ_G0030926.1 mouse_genomes_project 6 84172746 84196350 + MGP_129S1SvImJ_P0078301 Dctn1 protein_coding protein_coding MGP_129S1SvImJ_T0078302.1 MGP_129S1SvImJ_G0030926.1 mouse_genomes_project 6 84186366 84207638 + MGP_129S1SvImJ_P0078302 Dctn1 protein_coding protein_coding MGP_129S1SvImJ_T0078303.1 MGP_129S1SvImJ_G0030926.1 mouse_genomes_project 6 84186369 84207784 + MGP_129S1SvImJ_P0078303 Dctn1 protein_coding protein_coding MGP_129S1SvImJ_T0078304.1 MGP_129S1SvImJ_G0030926.1 mouse_genomes_project 6 84186393 84195921 + MGP_129S1SvImJ_P0078304 Dctn1 protein_coding protein_coding MGP_129S1SvImJ_T0078305.1 MGP_129S1SvImJ_G0030926.1 mouse_genomes_project 6 84192713 84207785 + MGP_129S1SvImJ_P0078305 Dctn1 protein_coding protein_coding MGP_129S1SvImJ_T0078306.1 MGP_129S1SvImJ_G0030926.1 mouse_genomes_project 6 84195378 84196375 + Dctn1 protein_coding retained_intron MGP_129S1SvImJ_T0078307.1 MGP_129S1SvImJ_G0030926.1 mouse_genomes_project 6 84201130 84202367 + Dctn1 protein_coding retained_intron MGP_129S1SvImJ_T0078308.1 MGP_129S1SvImJ_G0030926.1 mouse_genomes_project 6 84201329 84202074 + Dctn1 protein_coding retained_intron MGP_129S1SvImJ_T0078309.1 MGP_129S1SvImJ_G0030926.1 mouse_genomes_project 6 84201888 84202855 + Dctn1 protein_coding retained_intron MGP_129S1SvImJ_T0078310.1 MGP_129S1SvImJ_G0030926.1 mouse_genomes_project 6 84203800 84205403 + Dctn1 protein_coding retained_intron MGP_129S1SvImJ_T0080865.1 MGP_129S1SvImJ_G0031467.1 mouse_genomes_project 6 147362649 147369434 - MGP_129S1SvImJ_P0080865 Kcnj8 protein_coding protein_coding MGP_129S1SvImJ_T0080866.1 MGP_129S1SvImJ_G0031467.1 mouse_genomes_project 6 147362651 147369191 - MGP_129S1SvImJ_P0080866 Kcnj8 protein_coding protein_coding MGP_129S1SvImJ_T0015407.1 MGP_129S1SvImJ_G0013496.1 mouse_genomes_project 6 65136114 65137515 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102655.1 MGP_129S1SvImJ_G0040488.1 mouse_genomes_project 6 136934657 136935558 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0077791.1 MGP_129S1SvImJ_G0030816.1 mouse_genomes_project 6 58070304 58071337 - MGP_129S1SvImJ_P0077791 Vmn1r31 protein_coding protein_coding MGP_129S1SvImJ_T0077792.1 MGP_129S1SvImJ_G0030816.1 mouse_genomes_project 6 58070962 58074340 - MGP_129S1SvImJ_P0077792 Vmn1r31 protein_coding protein_coding MGP_129S1SvImJ_T0077793.1 MGP_129S1SvImJ_G0030816.1 mouse_genomes_project 6 58070962 58074294 - MGP_129S1SvImJ_P0077793 Vmn1r31 protein_coding protein_coding MGP_129S1SvImJ_T0077794.1 MGP_129S1SvImJ_G0030816.1 mouse_genomes_project 6 58070962 58074371 - MGP_129S1SvImJ_P0077794 Vmn1r31 protein_coding protein_coding MGP_129S1SvImJ_T0015257.1 MGP_129S1SvImJ_G0013346.1 mouse_genomes_project 6 3557695 3559840 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001980.1 MGP_129S1SvImJ_G0001893.1 mouse_genomes_project 6 41907258 41907886 + TEC TEC MGP_129S1SvImJ_T0005098.1 MGP_129S1SvImJ_G0004352.1 mouse_genomes_project 6 127750057 127752249 - Gm44096 antisense antisense MGP_129S1SvImJ_T0015562.1 MGP_129S1SvImJ_G0013651.1 mouse_genomes_project 6 115868317 115871518 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080371.1 MGP_129S1SvImJ_G0031327.1 mouse_genomes_project 6 132042847 132051775 - Fkbp4 protein_coding retained_intron MGP_129S1SvImJ_T0080372.1 MGP_129S1SvImJ_G0031327.1 mouse_genomes_project 6 132043209 132051775 - MGP_129S1SvImJ_P0080372 Fkbp4 protein_coding protein_coding MGP_129S1SvImJ_T0080373.1 MGP_129S1SvImJ_G0031327.1 mouse_genomes_project 6 132046314 132051238 - MGP_129S1SvImJ_P0080373 Fkbp4 protein_coding protein_coding MGP_129S1SvImJ_T0080374.1 MGP_129S1SvImJ_G0031327.1 mouse_genomes_project 6 132046861 132050751 - MGP_129S1SvImJ_P0080374 Fkbp4 protein_coding protein_coding MGP_129S1SvImJ_T0077061.1 MGP_129S1SvImJ_G0030597.1 mouse_genomes_project 6 37774137 37802879 - MGP_129S1SvImJ_P0077061 Mkrn1 protein_coding protein_coding MGP_129S1SvImJ_T0077062.1 MGP_129S1SvImJ_G0030597.1 mouse_genomes_project 6 37775475 37782367 - MGP_129S1SvImJ_P0077062 Mkrn1 protein_coding protein_coding MGP_129S1SvImJ_T0077063.1 MGP_129S1SvImJ_G0030597.1 mouse_genomes_project 6 37777086 37802663 - MGP_129S1SvImJ_P0077063 Mkrn1 protein_coding protein_coding MGP_129S1SvImJ_T0077064.1 MGP_129S1SvImJ_G0030597.1 mouse_genomes_project 6 37777092 37802954 - MGP_129S1SvImJ_P0077064 Mkrn1 protein_coding protein_coding MGP_129S1SvImJ_T0077065.1 MGP_129S1SvImJ_G0030597.1 mouse_genomes_project 6 37777607 37782718 - Mkrn1 protein_coding retained_intron MGP_129S1SvImJ_T0077066.1 MGP_129S1SvImJ_G0030597.1 mouse_genomes_project 6 37782447 37802353 - MGP_129S1SvImJ_P0077066 Mkrn1 protein_coding protein_coding MGP_129S1SvImJ_T0077067.1 MGP_129S1SvImJ_G0030597.1 mouse_genomes_project 6 37783175 37802894 - MGP_129S1SvImJ_P0077067 Mkrn1 protein_coding protein_coding MGP_129S1SvImJ_T0079339.1 MGP_129S1SvImJ_G0031126.1 mouse_genomes_project 6 115992857 116004614 + MGP_129S1SvImJ_P0079339 Il17rc protein_coding protein_coding MGP_129S1SvImJ_T0079340.1 MGP_129S1SvImJ_G0031126.1 mouse_genomes_project 6 115993713 115997891 + MGP_129S1SvImJ_P0079340 Il17rc protein_coding protein_coding MGP_129S1SvImJ_T0079341.1 MGP_129S1SvImJ_G0031126.1 mouse_genomes_project 6 115994224 116004614 + MGP_129S1SvImJ_P0079341 Il17rc protein_coding protein_coding MGP_129S1SvImJ_T0079342.1 MGP_129S1SvImJ_G0031126.1 mouse_genomes_project 6 115995707 115998197 + MGP_129S1SvImJ_P0079342 Il17rc protein_coding protein_coding MGP_129S1SvImJ_T0079343.1 MGP_129S1SvImJ_G0031126.1 mouse_genomes_project 6 115998040 116000754 + Il17rc protein_coding retained_intron MGP_129S1SvImJ_T0015320.1 MGP_129S1SvImJ_G0013409.1 mouse_genomes_project 6 35929306 35930263 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077690.1 MGP_129S1SvImJ_G0030773.1 mouse_genomes_project 6 54777733 54784274 + Ghrhr protein_coding retained_intron MGP_129S1SvImJ_T0077691.1 MGP_129S1SvImJ_G0030773.1 mouse_genomes_project 6 54777781 54794336 + MGP_129S1SvImJ_P0077691 Ghrhr protein_coding protein_coding MGP_129S1SvImJ_T0077692.1 MGP_129S1SvImJ_G0030773.1 mouse_genomes_project 6 54777803 54794125 + MGP_129S1SvImJ_P0077692 Ghrhr protein_coding protein_coding MGP_129S1SvImJ_T0008563.1 MGP_129S1SvImJ_G0006931.1 mouse_genomes_project 6 29746724 29883821 + Gm13849 lincRNA lincRNA MGP_129S1SvImJ_T0011660.1 MGP_129S1SvImJ_G0009776.1 mouse_genomes_project 6 51391530 51391655 + Gm27867 misc_RNA misc_RNA MGP_129S1SvImJ_T0015266.1 MGP_129S1SvImJ_G0013355.1 mouse_genomes_project 6 5526545 5527794 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079972.1 MGP_129S1SvImJ_G0031246.1 mouse_genomes_project 6 126571344 126718583 - MGP_129S1SvImJ_P0079972 protein_coding protein_coding MGP_129S1SvImJ_T0002192.1 MGP_129S1SvImJ_G0002104.1 mouse_genomes_project 6 144434524 144436177 + TEC TEC MGP_129S1SvImJ_T0015368.1 MGP_129S1SvImJ_G0013457.1 mouse_genomes_project 6 49875295 49876425 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001971.1 MGP_129S1SvImJ_G0001884.1 mouse_genomes_project 6 31715083 31717202 - TEC TEC MGP_129S1SvImJ_T0079661.1 MGP_129S1SvImJ_G0031188.1 mouse_genomes_project 6 121248860 121314140 - MGP_129S1SvImJ_P0079661 Ankrd26 protein_coding protein_coding MGP_129S1SvImJ_T0079662.1 MGP_129S1SvImJ_G0031188.1 mouse_genomes_project 6 121266785 121271837 - Ankrd26 protein_coding retained_intron MGP_129S1SvImJ_T0079663.1 MGP_129S1SvImJ_G0031188.1 mouse_genomes_project 6 121294177 121300376 - Ankrd26 protein_coding retained_intron MGP_129S1SvImJ_T0080000.1 MGP_129S1SvImJ_G0031259.1 mouse_genomes_project 6 127962953 128007928 + Lpcat3 protein_coding retained_intron MGP_129S1SvImJ_T0080001.1 MGP_129S1SvImJ_G0031259.1 mouse_genomes_project 6 127962953 128007976 + MGP_129S1SvImJ_P0080001 Lpcat3 protein_coding protein_coding MGP_129S1SvImJ_T0080002.1 MGP_129S1SvImJ_G0031259.1 mouse_genomes_project 6 127963098 128005848 + MGP_129S1SvImJ_P0080002 Lpcat3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080003.1 MGP_129S1SvImJ_G0031259.1 mouse_genomes_project 6 127963107 128001923 + Lpcat3 protein_coding retained_intron MGP_129S1SvImJ_T0080004.1 MGP_129S1SvImJ_G0031259.1 mouse_genomes_project 6 127963141 128002982 + Lpcat3 protein_coding retained_intron MGP_129S1SvImJ_T0080005.1 MGP_129S1SvImJ_G0031259.1 mouse_genomes_project 6 128003840 128006171 + Lpcat3 protein_coding retained_intron MGP_129S1SvImJ_T0080006.1 MGP_129S1SvImJ_G0031259.1 mouse_genomes_project 6 128005814 128006616 + Lpcat3 protein_coding processed_transcript MGP_129S1SvImJ_T0080007.1 MGP_129S1SvImJ_G0031259.1 mouse_genomes_project 6 128006312 128007486 + Lpcat3 protein_coding retained_intron MGP_129S1SvImJ_T0080008.1 MGP_129S1SvImJ_G0031259.1 mouse_genomes_project 6 128006562 128007575 + Lpcat3 protein_coding retained_intron MGP_129S1SvImJ_T0080525.1 MGP_129S1SvImJ_G0031387.1 mouse_genomes_project 6 136882235 136883219 - MGP_129S1SvImJ_P0080525 Tas2r136 protein_coding protein_coding MGP_129S1SvImJ_T0077693.1 MGP_129S1SvImJ_G0030774.1 mouse_genomes_project 6 54862246 54910952 + MGP_129S1SvImJ_P0077693 Adcyap1r1 protein_coding protein_coding MGP_129S1SvImJ_T0077694.1 MGP_129S1SvImJ_G0030774.1 mouse_genomes_project 6 54862296 54913493 + MGP_129S1SvImJ_P0077694 Adcyap1r1 protein_coding protein_coding MGP_129S1SvImJ_T0077695.1 MGP_129S1SvImJ_G0030774.1 mouse_genomes_project 6 54862325 54890273 + MGP_129S1SvImJ_P0077695 Adcyap1r1 protein_coding protein_coding MGP_129S1SvImJ_T0077696.1 MGP_129S1SvImJ_G0030774.1 mouse_genomes_project 6 54862445 54870477 + MGP_129S1SvImJ_P0077696 Adcyap1r1 protein_coding protein_coding MGP_129S1SvImJ_T0077697.1 MGP_129S1SvImJ_G0030774.1 mouse_genomes_project 6 54870467 54909218 + MGP_129S1SvImJ_P0077697 Adcyap1r1 protein_coding protein_coding MGP_129S1SvImJ_T0077698.1 MGP_129S1SvImJ_G0030774.1 mouse_genomes_project 6 54870467 54909218 + MGP_129S1SvImJ_P0077698 Adcyap1r1 protein_coding protein_coding MGP_129S1SvImJ_T0077699.1 MGP_129S1SvImJ_G0030774.1 mouse_genomes_project 6 54870467 54909475 + MGP_129S1SvImJ_P0077699 Adcyap1r1 protein_coding protein_coding MGP_129S1SvImJ_T0077700.1 MGP_129S1SvImJ_G0030774.1 mouse_genomes_project 6 54870467 54909218 + MGP_129S1SvImJ_P0077700 Adcyap1r1 protein_coding protein_coding MGP_129S1SvImJ_T0015582.1 MGP_129S1SvImJ_G0013671.1 mouse_genomes_project 6 121372455 121374055 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080180.1 MGP_129S1SvImJ_G0031287.1 mouse_genomes_project 6 128476173 128493183 + Iffo1 protein_coding retained_intron MGP_129S1SvImJ_T0080181.1 MGP_129S1SvImJ_G0031287.1 mouse_genomes_project 6 128476173 128493183 + MGP_129S1SvImJ_P0080181 Iffo1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080182.1 MGP_129S1SvImJ_G0031287.1 mouse_genomes_project 6 128476173 128493183 + MGP_129S1SvImJ_P0080182 Iffo1 protein_coding protein_coding MGP_129S1SvImJ_T0080183.1 MGP_129S1SvImJ_G0031287.1 mouse_genomes_project 6 128476183 128493177 + MGP_129S1SvImJ_P0080183 Iffo1 protein_coding protein_coding MGP_129S1SvImJ_T0080184.1 MGP_129S1SvImJ_G0031287.1 mouse_genomes_project 6 128476198 128493177 + Iffo1 protein_coding retained_intron MGP_129S1SvImJ_T0080185.1 MGP_129S1SvImJ_G0031287.1 mouse_genomes_project 6 128476733 128493177 + MGP_129S1SvImJ_P0080185 Iffo1 protein_coding protein_coding MGP_129S1SvImJ_T0080186.1 MGP_129S1SvImJ_G0031287.1 mouse_genomes_project 6 128476958 128493177 + Iffo1 protein_coding retained_intron MGP_129S1SvImJ_T0080187.1 MGP_129S1SvImJ_G0031287.1 mouse_genomes_project 6 128479939 128482420 + Iffo1 protein_coding processed_transcript MGP_129S1SvImJ_T0080188.1 MGP_129S1SvImJ_G0031287.1 mouse_genomes_project 6 128480460 128483663 + Iffo1 protein_coding retained_intron MGP_129S1SvImJ_T0080189.1 MGP_129S1SvImJ_G0031287.1 mouse_genomes_project 6 128484280 128492458 + Iffo1 protein_coding retained_intron MGP_129S1SvImJ_T0010794.1 MGP_129S1SvImJ_G0008910.1 mouse_genomes_project 6 75144801 75144911 - Gm22254 miRNA miRNA MGP_129S1SvImJ_T0015640.1 MGP_129S1SvImJ_G0013729.1 mouse_genomes_project 6 134611819 134670366 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077146.1 MGP_129S1SvImJ_G0030624.1 mouse_genomes_project 6 39851157 39859967 + MGP_129S1SvImJ_P0077146 Try10 protein_coding protein_coding MGP_129S1SvImJ_T0015641.1 MGP_129S1SvImJ_G0013730.1 mouse_genomes_project 6 135199529 135199644 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015392.1 MGP_129S1SvImJ_G0013481.1 mouse_genomes_project 6 62103931 62104240 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000230.1 MGP_129S1SvImJ_G0000177.1 mouse_genomes_project 6 70806020 70807490 - MGP_129S1SvImJ_P0000230 Igkv6-17 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0015573.1 MGP_129S1SvImJ_G0013662.1 mouse_genomes_project 6 118415862 118416270 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079133.1 MGP_129S1SvImJ_G0031090.1 mouse_genomes_project 6 104253275 104256822 - Cntn3 protein_coding retained_intron MGP_129S1SvImJ_T0079134.1 MGP_129S1SvImJ_G0031090.1 mouse_genomes_project 6 104253924 104676558 - MGP_129S1SvImJ_P0079134 Cntn3 protein_coding protein_coding MGP_129S1SvImJ_T0079135.1 MGP_129S1SvImJ_G0031090.1 mouse_genomes_project 6 104253926 104563127 - MGP_129S1SvImJ_P0079135 Cntn3 protein_coding protein_coding MGP_129S1SvImJ_T0077267.1 MGP_129S1SvImJ_G0030675.1 mouse_genomes_project 6 41836863 41837922 + MGP_129S1SvImJ_P0077267 Olfr47 protein_coding protein_coding MGP_129S1SvImJ_T0005055.1 MGP_129S1SvImJ_G0004322.1 mouse_genomes_project 6 92739804 92740348 - Gm14573 antisense antisense MGP_129S1SvImJ_T0000309.1 MGP_129S1SvImJ_G0000251.1 mouse_genomes_project 6 68483702 68484435 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0010761.1 MGP_129S1SvImJ_G0008877.1 mouse_genomes_project 6 457711 457796 - Mir653 miRNA miRNA MGP_129S1SvImJ_T0002057.1 MGP_129S1SvImJ_G0001970.1 mouse_genomes_project 6 81402200 81404915 + TEC TEC MGP_129S1SvImJ_T0008586.1 MGP_129S1SvImJ_G0006944.1 mouse_genomes_project 6 39530240 39537464 + 5830405F06Rik lincRNA lincRNA MGP_129S1SvImJ_T0008587.1 MGP_129S1SvImJ_G0006944.1 mouse_genomes_project 6 39530241 39535506 + 5830405F06Rik lincRNA lincRNA MGP_129S1SvImJ_T0080386.1 MGP_129S1SvImJ_G0031331.1 mouse_genomes_project 6 132250731 132480780 - MGP_129S1SvImJ_P0080386 protein_coding protein_coding MGP_129S1SvImJ_T0080396.1 MGP_129S1SvImJ_G0031331.1 mouse_genomes_project 6 132423884 132480717 - MGP_129S1SvImJ_P0080396 protein_coding protein_coding MGP_129S1SvImJ_T0080533.1 MGP_129S1SvImJ_G0031395.1 mouse_genomes_project 6 137125469 137126505 - MGP_129S1SvImJ_P0080533 Tas2r131 protein_coding protein_coding MGP_129S1SvImJ_T0078726.1 MGP_129S1SvImJ_G0031007.1 mouse_genomes_project 6 89578981 89594141 + MGP_129S1SvImJ_P0078726 Gata2 protein_coding protein_coding MGP_129S1SvImJ_T0078727.1 MGP_129S1SvImJ_G0031007.1 mouse_genomes_project 6 89584396 89594139 + MGP_129S1SvImJ_P0078727 Gata2 protein_coding protein_coding MGP_129S1SvImJ_T0078728.1 MGP_129S1SvImJ_G0031007.1 mouse_genomes_project 6 89584396 89585726 + MGP_129S1SvImJ_P0078728 Gata2 protein_coding protein_coding MGP_129S1SvImJ_T0078729.1 MGP_129S1SvImJ_G0031007.1 mouse_genomes_project 6 89586981 89588704 + Gata2 protein_coding retained_intron MGP_129S1SvImJ_T0078730.1 MGP_129S1SvImJ_G0031007.1 mouse_genomes_project 6 89591553 89592880 + Gata2 protein_coding retained_intron MGP_129S1SvImJ_T0101226.1 MGP_129S1SvImJ_G0039293.1 mouse_genomes_project 6 4771627 4771756 + Gm22276 snoRNA snoRNA MGP_129S1SvImJ_T0018344.1 MGP_129S1SvImJ_G0015649.1 mouse_genomes_project 6 128606359 128629194 + processed_transcript antisense MGP_129S1SvImJ_T0018345.1 MGP_129S1SvImJ_G0015649.1 mouse_genomes_project 6 128606408 128607412 + processed_transcript retained_intron MGP_129S1SvImJ_T0018346.1 MGP_129S1SvImJ_G0015649.1 mouse_genomes_project 6 128606428 128611561 + processed_transcript antisense MGP_129S1SvImJ_T0018347.1 MGP_129S1SvImJ_G0015649.1 mouse_genomes_project 6 128606502 128614532 + processed_transcript antisense MGP_129S1SvImJ_T0080108.1 MGP_129S1SvImJ_G0031276.1 mouse_genomes_project 6 128218554 128226955 - MGP_129S1SvImJ_P0080108 Lag3 protein_coding protein_coding MGP_129S1SvImJ_T0080109.1 MGP_129S1SvImJ_G0031276.1 mouse_genomes_project 6 128223848 128225301 - Lag3 protein_coding processed_transcript MGP_129S1SvImJ_T0080438.1 MGP_129S1SvImJ_G0031347.1 mouse_genomes_project 6 133079334 133096021 + MGP_129S1SvImJ_P0080438 Clec9a protein_coding protein_coding MGP_129S1SvImJ_T0080439.1 MGP_129S1SvImJ_G0031347.1 mouse_genomes_project 6 133079335 133093827 + MGP_129S1SvImJ_P0080439 Clec9a protein_coding protein_coding MGP_129S1SvImJ_T0080440.1 MGP_129S1SvImJ_G0031347.1 mouse_genomes_project 6 133079427 133093616 + MGP_129S1SvImJ_P0080440 Clec9a protein_coding protein_coding MGP_129S1SvImJ_T0080441.1 MGP_129S1SvImJ_G0031347.1 mouse_genomes_project 6 133079427 133093616 + MGP_129S1SvImJ_P0080441 Clec9a protein_coding protein_coding MGP_129S1SvImJ_T0080657.1 MGP_129S1SvImJ_G0031425.1 mouse_genomes_project 6 141268698 141270532 + MGP_129S1SvImJ_P0080657 H2afj protein_coding protein_coding MGP_129S1SvImJ_T0080658.1 MGP_129S1SvImJ_G0031425.1 mouse_genomes_project 6 141268787 141270246 + MGP_129S1SvImJ_P0080658 H2afj protein_coding protein_coding MGP_129S1SvImJ_T0002031.1 MGP_129S1SvImJ_G0001944.1 mouse_genomes_project 6 72620240 72622853 + TEC TEC MGP_129S1SvImJ_T0001939.1 MGP_129S1SvImJ_G0001852.1 mouse_genomes_project 6 3773850 3775883 - TEC TEC MGP_129S1SvImJ_T0015417.1 MGP_129S1SvImJ_G0013506.1 mouse_genomes_project 6 66196959 66200434 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080510.1 MGP_129S1SvImJ_G0031374.1 mouse_genomes_project 6 135644189 135645098 - MGP_129S1SvImJ_P0080510 Tas2r104 protein_coding protein_coding MGP_129S1SvImJ_T0001989.1 MGP_129S1SvImJ_G0001902.1 mouse_genomes_project 6 44042837 44045101 + TEC TEC MGP_129S1SvImJ_T0076942.1 MGP_129S1SvImJ_G0030570.1 mouse_genomes_project 6 33413713 33459633 - MGP_129S1SvImJ_P0076942 Slc13a4 protein_coding protein_coding MGP_129S1SvImJ_T0076943.1 MGP_129S1SvImJ_G0030570.1 mouse_genomes_project 6 33430751 33439647 - Slc13a4 protein_coding retained_intron MGP_129S1SvImJ_T0076944.1 MGP_129S1SvImJ_G0030570.1 mouse_genomes_project 6 33436937 33459631 - Slc13a4 protein_coding retained_intron MGP_129S1SvImJ_T0005096.1 MGP_129S1SvImJ_G0004350.1 mouse_genomes_project 6 124162320 124164622 - Gm15856 antisense antisense MGP_129S1SvImJ_T0005087.1 MGP_129S1SvImJ_G0004341.1 mouse_genomes_project 6 116487514 116489982 + Gm15082 antisense antisense MGP_129S1SvImJ_T0015538.1 MGP_129S1SvImJ_G0013627.1 mouse_genomes_project 6 105271923 105272076 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076239.1 MGP_129S1SvImJ_G0030444.1 mouse_genomes_project 6 4571822 4589701 - MGP_129S1SvImJ_P0076239 Asns protein_coding protein_coding MGP_129S1SvImJ_T0076240.1 MGP_129S1SvImJ_G0030444.1 mouse_genomes_project 6 4571822 4589318 - MGP_129S1SvImJ_P0076240 Asns protein_coding protein_coding MGP_129S1SvImJ_T0076241.1 MGP_129S1SvImJ_G0030444.1 mouse_genomes_project 6 4572123 4574049 - Asns protein_coding processed_transcript MGP_129S1SvImJ_T0076242.1 MGP_129S1SvImJ_G0030444.1 mouse_genomes_project 6 4577939 4578934 - Asns protein_coding retained_intron MGP_129S1SvImJ_T0076243.1 MGP_129S1SvImJ_G0030444.1 mouse_genomes_project 6 4578848 4589557 - MGP_129S1SvImJ_P0076243 Asns protein_coding protein_coding MGP_129S1SvImJ_T0076244.1 MGP_129S1SvImJ_G0030444.1 mouse_genomes_project 6 4581543 4588678 - MGP_129S1SvImJ_P0076244 Asns protein_coding protein_coding MGP_129S1SvImJ_T0076245.1 MGP_129S1SvImJ_G0030444.1 mouse_genomes_project 6 4581635 4589319 - MGP_129S1SvImJ_P0076245 Asns protein_coding protein_coding MGP_129S1SvImJ_T0002694.1 MGP_129S1SvImJ_G0002576.1 mouse_genomes_project 6 39366607 39367264 + MGP_129S1SvImJ_P0002694 Trbv1 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0079792.1 MGP_129S1SvImJ_G0031204.1 mouse_genomes_project 6 123355584 123376013 + Il17ra protein_coding retained_intron MGP_129S1SvImJ_T0079793.1 MGP_129S1SvImJ_G0031204.1 mouse_genomes_project 6 123355584 123380289 + MGP_129S1SvImJ_P0079793 Il17ra protein_coding protein_coding MGP_129S1SvImJ_T0079794.1 MGP_129S1SvImJ_G0031204.1 mouse_genomes_project 6 123365880 123372316 + Il17ra protein_coding processed_transcript MGP_129S1SvImJ_T0015303.1 MGP_129S1SvImJ_G0013392.1 mouse_genomes_project 6 22400716 22401546 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078545.1 MGP_129S1SvImJ_G0030974.1 mouse_genomes_project 6 87663942 87676569 - MGP_129S1SvImJ_P0078545 Pcyox1 protein_coding protein_coding MGP_129S1SvImJ_T0078546.1 MGP_129S1SvImJ_G0030974.1 mouse_genomes_project 6 87667780 87676556 - MGP_129S1SvImJ_P0078546 Pcyox1 protein_coding protein_coding MGP_129S1SvImJ_T0078547.1 MGP_129S1SvImJ_G0030974.1 mouse_genomes_project 6 87668098 87671451 - MGP_129S1SvImJ_P0078547 Pcyox1 protein_coding protein_coding MGP_129S1SvImJ_T0078548.1 MGP_129S1SvImJ_G0030974.1 mouse_genomes_project 6 87670791 87676558 - MGP_129S1SvImJ_P0078548 Pcyox1 protein_coding protein_coding MGP_129S1SvImJ_T0078549.1 MGP_129S1SvImJ_G0030974.1 mouse_genomes_project 6 87673539 87676041 - Pcyox1 protein_coding retained_intron MGP_129S1SvImJ_T0078550.1 MGP_129S1SvImJ_G0030974.1 mouse_genomes_project 6 87675197 87676534 - Pcyox1 protein_coding retained_intron MGP_129S1SvImJ_T0079824.1 MGP_129S1SvImJ_G0031212.1 mouse_genomes_project 6 123852733 123924495 - Mical3 protein_coding processed_transcript MGP_129S1SvImJ_T0079825.1 MGP_129S1SvImJ_G0031212.1 mouse_genomes_project 6 123855806 123881100 - Mical3 protein_coding processed_transcript MGP_129S1SvImJ_T0079826.1 MGP_129S1SvImJ_G0031212.1 mouse_genomes_project 6 123855850 123856560 - Mical3 protein_coding retained_intron MGP_129S1SvImJ_T0079827.1 MGP_129S1SvImJ_G0031212.1 mouse_genomes_project 6 123873156 123880188 - Mical3 protein_coding processed_transcript MGP_129S1SvImJ_T0079828.1 MGP_129S1SvImJ_G0031212.1 mouse_genomes_project 6 123880807 123924495 - Mical3 protein_coding processed_transcript MGP_129S1SvImJ_T0079829.1 MGP_129S1SvImJ_G0031212.1 mouse_genomes_project 6 123882476 123888610 - Mical3 protein_coding processed_transcript MGP_129S1SvImJ_T0079830.1 MGP_129S1SvImJ_G0031212.1 mouse_genomes_project 6 123917258 123943583 - MGP_129S1SvImJ_P0079830 Mical3 protein_coding protein_coding MGP_129S1SvImJ_T0079831.1 MGP_129S1SvImJ_G0031212.1 mouse_genomes_project 6 123928583 124006375 - MGP_129S1SvImJ_P0079831 Mical3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079832.1 MGP_129S1SvImJ_G0031212.1 mouse_genomes_project 6 123928583 124006377 - MGP_129S1SvImJ_P0079832 Mical3 protein_coding protein_coding MGP_129S1SvImJ_T0079833.1 MGP_129S1SvImJ_G0031212.1 mouse_genomes_project 6 123928584 123943598 - MGP_129S1SvImJ_P0079833 Mical3 protein_coding protein_coding MGP_129S1SvImJ_T0079834.1 MGP_129S1SvImJ_G0031212.1 mouse_genomes_project 6 123937945 124039849 - Mical3 protein_coding retained_intron MGP_129S1SvImJ_T0079835.1 MGP_129S1SvImJ_G0031212.1 mouse_genomes_project 6 123937945 123943620 - Mical3 protein_coding processed_transcript MGP_129S1SvImJ_T0079836.1 MGP_129S1SvImJ_G0031212.1 mouse_genomes_project 6 123943541 124062496 - MGP_129S1SvImJ_P0079836 Mical3 protein_coding protein_coding MGP_129S1SvImJ_T0079837.1 MGP_129S1SvImJ_G0031212.1 mouse_genomes_project 6 123943720 123947094 - Mical3 protein_coding retained_intron MGP_129S1SvImJ_T0079838.1 MGP_129S1SvImJ_G0031212.1 mouse_genomes_project 6 123946081 123946740 - Mical3 protein_coding processed_transcript MGP_129S1SvImJ_T0079839.1 MGP_129S1SvImJ_G0031212.1 mouse_genomes_project 6 123950270 123952095 - Mical3 protein_coding retained_intron MGP_129S1SvImJ_T0077279.1 MGP_129S1SvImJ_G0030678.1 mouse_genomes_project 6 41980750 42312353 - MGP_129S1SvImJ_P0077279 Tpk1 protein_coding protein_coding MGP_129S1SvImJ_T0077280.1 MGP_129S1SvImJ_G0030678.1 mouse_genomes_project 6 41980822 42273704 - Tpk1 protein_coding processed_transcript MGP_129S1SvImJ_T0077281.1 MGP_129S1SvImJ_G0030678.1 mouse_genomes_project 6 41981023 42312250 - MGP_129S1SvImJ_P0077281 Tpk1 protein_coding protein_coding MGP_129S1SvImJ_T0077282.1 MGP_129S1SvImJ_G0030678.1 mouse_genomes_project 6 41982591 42115436 - Tpk1 protein_coding processed_transcript MGP_129S1SvImJ_T0077283.1 MGP_129S1SvImJ_G0030678.1 mouse_genomes_project 6 42236867 42312294 - Tpk1 protein_coding processed_transcript MGP_129S1SvImJ_T0077284.1 MGP_129S1SvImJ_G0030678.1 mouse_genomes_project 6 42239357 42311956 - Tpk1 protein_coding processed_transcript MGP_129S1SvImJ_T0008651.1 MGP_129S1SvImJ_G0006998.1 mouse_genomes_project 6 82957517 82958508 - Gm44202 lincRNA lincRNA MGP_129S1SvImJ_T0101273.1 MGP_129S1SvImJ_G0039340.1 mouse_genomes_project 6 107415313 107415452 + Gm23339 snoRNA snoRNA MGP_129S1SvImJ_T0076313.1 MGP_129S1SvImJ_G0030459.1 mouse_genomes_project 6 10658927 10686207 - MGP_129S1SvImJ_P0076313 Tmem168 protein_coding protein_coding MGP_129S1SvImJ_T0076314.1 MGP_129S1SvImJ_G0030459.1 mouse_genomes_project 6 10661027 10686121 - MGP_129S1SvImJ_P0076314 Tmem168 protein_coding protein_coding MGP_129S1SvImJ_T0076315.1 MGP_129S1SvImJ_G0030459.1 mouse_genomes_project 6 10681487 10685855 - Tmem168 protein_coding processed_transcript MGP_129S1SvImJ_T0076316.1 MGP_129S1SvImJ_G0030459.1 mouse_genomes_project 6 10681503 10686112 - Tmem168 protein_coding processed_transcript MGP_129S1SvImJ_T0076317.1 MGP_129S1SvImJ_G0030459.1 mouse_genomes_project 6 10684040 10686151 - Tmem168 protein_coding processed_transcript MGP_129S1SvImJ_T0076318.1 MGP_129S1SvImJ_G0030459.1 mouse_genomes_project 6 10684704 10686126 - Tmem168 protein_coding processed_transcript MGP_129S1SvImJ_T0076319.1 MGP_129S1SvImJ_G0030459.1 mouse_genomes_project 6 10685394 10686134 - Tmem168 protein_coding processed_transcript MGP_129S1SvImJ_T0076572.1 MGP_129S1SvImJ_G0030512.1 mouse_genomes_project 6 26396125 26567391 - MGP_129S1SvImJ_P0076572 Lrrc4 protein_coding protein_coding MGP_129S1SvImJ_T0076577.1 MGP_129S1SvImJ_G0030512.1 mouse_genomes_project 6 26565178 26568793 - MGP_129S1SvImJ_P0076577 Lrrc4 protein_coding protein_coding MGP_129S1SvImJ_T0078669.1 MGP_129S1SvImJ_G0030997.1 mouse_genomes_project 6 89142986 89144683 + MGP_129S1SvImJ_P0078669 Gp9 protein_coding protein_coding MGP_129S1SvImJ_T0008609.1 MGP_129S1SvImJ_G0006962.1 mouse_genomes_project 6 51230621 51248011 + Gm44077 lincRNA lincRNA MGP_129S1SvImJ_T0015261.1 MGP_129S1SvImJ_G0013350.1 mouse_genomes_project 6 4437243 4437604 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005091.1 MGP_129S1SvImJ_G0004345.1 mouse_genomes_project 6 118761568 118782177 + Gm20404 antisense antisense MGP_129S1SvImJ_T0077654.1 MGP_129S1SvImJ_G0030763.1 mouse_genomes_project 6 53952435 54003049 + MGP_129S1SvImJ_P0077654 Plekha8 protein_coding protein_coding MGP_129S1SvImJ_T0011655.1 MGP_129S1SvImJ_G0009771.1 mouse_genomes_project 6 28638445 28638544 + Gm27568 misc_RNA misc_RNA MGP_129S1SvImJ_T0015585.1 MGP_129S1SvImJ_G0013674.1 mouse_genomes_project 6 123480617 123480954 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102594.1 MGP_129S1SvImJ_G0040427.1 mouse_genomes_project 6 36868635 36874627 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002062.1 MGP_129S1SvImJ_G0001975.1 mouse_genomes_project 6 84078300 84079820 - TEC TEC MGP_129S1SvImJ_T0077159.1 MGP_129S1SvImJ_G0030632.1 mouse_genomes_project 6 40169146 40197753 - MGP_129S1SvImJ_P0077159 Trpv5 protein_coding protein_coding MGP_129S1SvImJ_T0077160.1 MGP_129S1SvImJ_G0030632.1 mouse_genomes_project 6 40170103 40197639 - MGP_129S1SvImJ_P0077160 Trpv5 protein_coding protein_coding MGP_129S1SvImJ_T0079645.1 MGP_129S1SvImJ_G0031183.1 mouse_genomes_project 6 120846044 120868214 - Csgalnact2 protein_coding retained_intron MGP_129S1SvImJ_T0079646.1 MGP_129S1SvImJ_G0031183.1 mouse_genomes_project 6 120846044 120877735 - MGP_129S1SvImJ_P0079646 Csgalnact2 protein_coding protein_coding MGP_129S1SvImJ_T0079647.1 MGP_129S1SvImJ_G0031183.1 mouse_genomes_project 6 120847928 120865000 - MGP_129S1SvImJ_P0079647 Csgalnact2 protein_coding protein_coding MGP_129S1SvImJ_T0000237.1 MGP_129S1SvImJ_G0000183.1 mouse_genomes_project 6 70992538 71115434 + MGP_129S1SvImJ_P0000237 Igkv3-1 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0076702.1 MGP_129S1SvImJ_G0030533.1 mouse_genomes_project 6 27884958 28003444 + MGP_129S1SvImJ_P0076702 Nrf1 protein_coding protein_coding MGP_129S1SvImJ_T0076703.1 MGP_129S1SvImJ_G0030533.1 mouse_genomes_project 6 27884961 27945036 + MGP_129S1SvImJ_P0076703 Nrf1 protein_coding protein_coding MGP_129S1SvImJ_T0076704.1 MGP_129S1SvImJ_G0030533.1 mouse_genomes_project 6 27884972 28003167 + MGP_129S1SvImJ_P0076704 Nrf1 protein_coding protein_coding MGP_129S1SvImJ_T0076705.1 MGP_129S1SvImJ_G0030533.1 mouse_genomes_project 6 27884999 27945369 + Nrf1 protein_coding retained_intron MGP_129S1SvImJ_T0076706.1 MGP_129S1SvImJ_G0030533.1 mouse_genomes_project 6 27885001 27993328 + MGP_129S1SvImJ_P0076706 Nrf1 protein_coding protein_coding MGP_129S1SvImJ_T0076707.1 MGP_129S1SvImJ_G0030533.1 mouse_genomes_project 6 27885012 27941813 + MGP_129S1SvImJ_P0076707 Nrf1 protein_coding protein_coding MGP_129S1SvImJ_T0076708.1 MGP_129S1SvImJ_G0030533.1 mouse_genomes_project 6 27885015 28002500 + MGP_129S1SvImJ_P0076708 Nrf1 protein_coding protein_coding MGP_129S1SvImJ_T0076709.1 MGP_129S1SvImJ_G0030533.1 mouse_genomes_project 6 27885037 28002495 + MGP_129S1SvImJ_P0076709 Nrf1 protein_coding protein_coding MGP_129S1SvImJ_T0076710.1 MGP_129S1SvImJ_G0030533.1 mouse_genomes_project 6 27885042 27993665 + MGP_129S1SvImJ_P0076710 Nrf1 protein_coding protein_coding MGP_129S1SvImJ_T0076711.1 MGP_129S1SvImJ_G0030533.1 mouse_genomes_project 6 27885042 27978619 + MGP_129S1SvImJ_P0076711 Nrf1 protein_coding protein_coding MGP_129S1SvImJ_T0076712.1 MGP_129S1SvImJ_G0030533.1 mouse_genomes_project 6 27885121 27936429 + MGP_129S1SvImJ_P0076712 Nrf1 protein_coding protein_coding MGP_129S1SvImJ_T0076713.1 MGP_129S1SvImJ_G0030533.1 mouse_genomes_project 6 27921472 27978267 + MGP_129S1SvImJ_P0076713 Nrf1 protein_coding protein_coding MGP_129S1SvImJ_T0076714.1 MGP_129S1SvImJ_G0030533.1 mouse_genomes_project 6 27936279 27993323 + MGP_129S1SvImJ_P0076714 Nrf1 protein_coding protein_coding MGP_129S1SvImJ_T0076715.1 MGP_129S1SvImJ_G0030533.1 mouse_genomes_project 6 27936285 28001651 + MGP_129S1SvImJ_P0076715 Nrf1 protein_coding protein_coding MGP_129S1SvImJ_T0076716.1 MGP_129S1SvImJ_G0030533.1 mouse_genomes_project 6 27936285 27993323 + MGP_129S1SvImJ_P0076716 Nrf1 protein_coding protein_coding MGP_129S1SvImJ_T0076717.1 MGP_129S1SvImJ_G0030533.1 mouse_genomes_project 6 27936285 27977911 + MGP_129S1SvImJ_P0076717 Nrf1 protein_coding protein_coding MGP_129S1SvImJ_T0076718.1 MGP_129S1SvImJ_G0030533.1 mouse_genomes_project 6 27936285 27977911 + MGP_129S1SvImJ_P0076718 Nrf1 protein_coding protein_coding MGP_129S1SvImJ_T0076719.1 MGP_129S1SvImJ_G0030533.1 mouse_genomes_project 6 27936324 27937389 + Nrf1 protein_coding retained_intron MGP_129S1SvImJ_T0076720.1 MGP_129S1SvImJ_G0030533.1 mouse_genomes_project 6 27944243 27962887 + Nrf1 protein_coding processed_transcript MGP_129S1SvImJ_T0076721.1 MGP_129S1SvImJ_G0030533.1 mouse_genomes_project 6 27962875 27989372 + MGP_129S1SvImJ_P0076721 Nrf1 protein_coding protein_coding MGP_129S1SvImJ_T0076212.1 MGP_129S1SvImJ_G0030437.1 mouse_genomes_project 6 2588632 2905746 + MGP_129S1SvImJ_P0076212 Dync1i1 protein_coding protein_coding MGP_129S1SvImJ_T0076213.1 MGP_129S1SvImJ_G0030437.1 mouse_genomes_project 6 2588756 2905737 + MGP_129S1SvImJ_P0076213 Dync1i1 protein_coding protein_coding MGP_129S1SvImJ_T0076214.1 MGP_129S1SvImJ_G0030437.1 mouse_genomes_project 6 2588784 2905746 + MGP_129S1SvImJ_P0076214 Dync1i1 protein_coding protein_coding MGP_129S1SvImJ_T0076215.1 MGP_129S1SvImJ_G0030437.1 mouse_genomes_project 6 2588805 2905746 + MGP_129S1SvImJ_P0076215 Dync1i1 protein_coding protein_coding MGP_129S1SvImJ_T0076216.1 MGP_129S1SvImJ_G0030437.1 mouse_genomes_project 6 2588811 2629146 + MGP_129S1SvImJ_P0076216 Dync1i1 protein_coding protein_coding MGP_129S1SvImJ_T0076217.1 MGP_129S1SvImJ_G0030437.1 mouse_genomes_project 6 2619531 2648152 + MGP_129S1SvImJ_P0076217 Dync1i1 protein_coding protein_coding MGP_129S1SvImJ_T0076218.1 MGP_129S1SvImJ_G0030437.1 mouse_genomes_project 6 2882643 2905494 + Dync1i1 protein_coding retained_intron MGP_129S1SvImJ_T0015347.1 MGP_129S1SvImJ_G0013436.1 mouse_genomes_project 6 46690855 46691234 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015613.1 MGP_129S1SvImJ_G0013702.1 mouse_genomes_project 6 129764329 129764742 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077285.1 MGP_129S1SvImJ_G0030679.1 mouse_genomes_project 6 43762044 46184125 + MGP_129S1SvImJ_P0077285 Cntnap2 protein_coding protein_coding MGP_129S1SvImJ_T0077286.1 MGP_129S1SvImJ_G0030679.1 mouse_genomes_project 6 44941387 45200867 + Cntnap2 protein_coding processed_transcript MGP_129S1SvImJ_T0077287.1 MGP_129S1SvImJ_G0030679.1 mouse_genomes_project 6 45857762 45915594 + MGP_129S1SvImJ_P0077287 Cntnap2 protein_coding protein_coding MGP_129S1SvImJ_T0077289.1 MGP_129S1SvImJ_G0030679.1 mouse_genomes_project 6 46119931 46184121 + MGP_129S1SvImJ_P0077289 Cntnap2 protein_coding protein_coding MGP_129S1SvImJ_T0077290.1 MGP_129S1SvImJ_G0030679.1 mouse_genomes_project 6 46119997 46179545 + MGP_129S1SvImJ_P0077290 Cntnap2 protein_coding protein_coding MGP_129S1SvImJ_T0076658.1 MGP_129S1SvImJ_G0030528.1 mouse_genomes_project 6 27345420 27416851 - MGP_129S1SvImJ_P0076658 Tnpo3 protein_coding protein_coding MGP_129S1SvImJ_T0076659.1 MGP_129S1SvImJ_G0030528.1 mouse_genomes_project 6 27345420 27417131 - MGP_129S1SvImJ_P0076659 Tnpo3 protein_coding protein_coding MGP_129S1SvImJ_T0076660.1 MGP_129S1SvImJ_G0030528.1 mouse_genomes_project 6 27345478 27364588 - MGP_129S1SvImJ_P0076660 Tnpo3 protein_coding protein_coding MGP_129S1SvImJ_T0076662.1 MGP_129S1SvImJ_G0030528.1 mouse_genomes_project 6 27346066 27417055 - MGP_129S1SvImJ_P0076662 Tnpo3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076663.1 MGP_129S1SvImJ_G0030528.1 mouse_genomes_project 6 27359376 27361559 - Tnpo3 protein_coding retained_intron MGP_129S1SvImJ_T0076664.1 MGP_129S1SvImJ_G0030528.1 mouse_genomes_project 6 27369370 27416867 - Tnpo3 protein_coding retained_intron MGP_129S1SvImJ_T0076665.1 MGP_129S1SvImJ_G0030528.1 mouse_genomes_project 6 27374138 27377593 - Tnpo3 protein_coding retained_intron MGP_129S1SvImJ_T0076666.1 MGP_129S1SvImJ_G0030528.1 mouse_genomes_project 6 27385820 27389617 - Tnpo3 protein_coding retained_intron MGP_129S1SvImJ_T0076667.1 MGP_129S1SvImJ_G0030528.1 mouse_genomes_project 6 27387321 27417063 - Tnpo3 protein_coding retained_intron MGP_129S1SvImJ_T0076668.1 MGP_129S1SvImJ_G0030528.1 mouse_genomes_project 6 27390573 27416878 - Tnpo3 protein_coding retained_intron MGP_129S1SvImJ_T0076669.1 MGP_129S1SvImJ_G0030528.1 mouse_genomes_project 6 27396318 27416857 - Tnpo3 protein_coding processed_transcript MGP_129S1SvImJ_T0102608.1 MGP_129S1SvImJ_G0040441.1 mouse_genomes_project 6 41787397 41787923 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0076356.1 MGP_129S1SvImJ_G0030466.1 mouse_genomes_project 6 14036253 14071138 - MGP_129S1SvImJ_P0076356 Tfec protein_coding protein_coding MGP_129S1SvImJ_T0076357.1 MGP_129S1SvImJ_G0030466.1 mouse_genomes_project 6 14036259 14104983 - MGP_129S1SvImJ_P0076357 Tfec protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076358.1 MGP_129S1SvImJ_G0030466.1 mouse_genomes_project 6 14037564 14038136 - MGP_129S1SvImJ_P0076358 Tfec protein_coding protein_coding MGP_129S1SvImJ_T0076359.1 MGP_129S1SvImJ_G0030466.1 mouse_genomes_project 6 14044290 14105025 - Tfec protein_coding retained_intron MGP_129S1SvImJ_T0076360.1 MGP_129S1SvImJ_G0030466.1 mouse_genomes_project 6 14047071 14048871 - Tfec protein_coding retained_intron MGP_129S1SvImJ_T0010768.1 MGP_129S1SvImJ_G0008884.1 mouse_genomes_project 6 25637810 25637906 - Mir592 miRNA miRNA MGP_129S1SvImJ_T0078590.1 MGP_129S1SvImJ_G0030979.1 mouse_genomes_project 6 87934966 87936513 + MGP_129S1SvImJ_P0078590 Asprv1 protein_coding protein_coding MGP_129S1SvImJ_T0078889.1 MGP_129S1SvImJ_G0031042.1 mouse_genomes_project 6 92586557 92695364 - MGP_129S1SvImJ_P0078889 Nup210 protein_coding protein_coding MGP_129S1SvImJ_T0078890.1 MGP_129S1SvImJ_G0031042.1 mouse_genomes_project 6 92586559 92695354 - MGP_129S1SvImJ_P0078890 Nup210 protein_coding protein_coding MGP_129S1SvImJ_T0078891.1 MGP_129S1SvImJ_G0031042.1 mouse_genomes_project 6 92586559 92631430 - MGP_129S1SvImJ_P0078891 Nup210 protein_coding protein_coding MGP_129S1SvImJ_T0078892.1 MGP_129S1SvImJ_G0031042.1 mouse_genomes_project 6 92586806 92592410 - Nup210 protein_coding processed_transcript MGP_129S1SvImJ_T0078893.1 MGP_129S1SvImJ_G0031042.1 mouse_genomes_project 6 92593725 92600198 - Nup210 protein_coding retained_intron MGP_129S1SvImJ_T0078894.1 MGP_129S1SvImJ_G0031042.1 mouse_genomes_project 6 92593904 92598741 - Nup210 protein_coding processed_transcript MGP_129S1SvImJ_T0078895.1 MGP_129S1SvImJ_G0031042.1 mouse_genomes_project 6 92601268 92604947 - Nup210 protein_coding retained_intron MGP_129S1SvImJ_T0078896.1 MGP_129S1SvImJ_G0031042.1 mouse_genomes_project 6 92628636 92629672 - Nup210 protein_coding processed_transcript MGP_129S1SvImJ_T0078897.1 MGP_129S1SvImJ_G0031042.1 mouse_genomes_project 6 92638380 92643105 - Nup210 protein_coding processed_transcript MGP_129S1SvImJ_T0078898.1 MGP_129S1SvImJ_G0031042.1 mouse_genomes_project 6 92662623 92675642 - Nup210 protein_coding retained_intron MGP_129S1SvImJ_T0078899.1 MGP_129S1SvImJ_G0031042.1 mouse_genomes_project 6 92692890 92695331 - Nup210 protein_coding retained_intron MGP_129S1SvImJ_T0002718.1 MGP_129S1SvImJ_G0002596.1 mouse_genomes_project 6 39761826 39762441 + MGP_129S1SvImJ_P0002718 Trbv30 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002719.1 MGP_129S1SvImJ_G0002596.1 mouse_genomes_project 6 39761826 39762441 + MGP_129S1SvImJ_P0002719 Trbv30 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0079938.1 MGP_129S1SvImJ_G0031235.1 mouse_genomes_project 6 125996790 126013389 + MGP_129S1SvImJ_P0079938 Necap1 protein_coding protein_coding MGP_129S1SvImJ_T0079939.1 MGP_129S1SvImJ_G0031235.1 mouse_genomes_project 6 125996865 126000511 + Necap1 protein_coding processed_transcript MGP_129S1SvImJ_T0079940.1 MGP_129S1SvImJ_G0031235.1 mouse_genomes_project 6 125996887 126006962 + Necap1 protein_coding retained_intron MGP_129S1SvImJ_T0079941.1 MGP_129S1SvImJ_G0031235.1 mouse_genomes_project 6 125996897 126005677 + Necap1 protein_coding retained_intron MGP_129S1SvImJ_T0008757.1 MGP_129S1SvImJ_G0007078.1 mouse_genomes_project 6 138873370 138875818 - Gm43949 lincRNA lincRNA MGP_129S1SvImJ_T0079468.1 MGP_129S1SvImJ_G0031149.1 mouse_genomes_project 6 118169558 118179624 + MGP_129S1SvImJ_P0079468 Tsen2 protein_coding protein_coding MGP_129S1SvImJ_T0079469.1 MGP_129S1SvImJ_G0031149.1 mouse_genomes_project 6 118169558 118204988 + MGP_129S1SvImJ_P0079469 Tsen2 protein_coding protein_coding MGP_129S1SvImJ_T0079470.1 MGP_129S1SvImJ_G0031149.1 mouse_genomes_project 6 118169596 118185125 + Tsen2 protein_coding processed_transcript MGP_129S1SvImJ_T0079471.1 MGP_129S1SvImJ_G0031149.1 mouse_genomes_project 6 118169600 118177713 + Tsen2 protein_coding retained_intron MGP_129S1SvImJ_T0079472.1 MGP_129S1SvImJ_G0031149.1 mouse_genomes_project 6 118200807 118204351 + Tsen2 protein_coding retained_intron MGP_129S1SvImJ_T0008615.1 MGP_129S1SvImJ_G0006965.1 mouse_genomes_project 6 51760608 51768226 + 1700094M24Rik lincRNA lincRNA MGP_129S1SvImJ_T0000236.1 MGP_129S1SvImJ_G0000182.1 mouse_genomes_project 6 70991854 71110614 + MGP_129S1SvImJ_P0000236 Igkv3-9 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0002129.1 MGP_129S1SvImJ_G0002042.1 mouse_genomes_project 6 103443418 103444306 - TEC TEC MGP_129S1SvImJ_T0002149.1 MGP_129S1SvImJ_G0002062.1 mouse_genomes_project 6 119061787 119062732 + TEC TEC MGP_129S1SvImJ_T0015486.1 MGP_129S1SvImJ_G0013575.1 mouse_genomes_project 6 84879959 84880506 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000232.1 MGP_129S1SvImJ_G0000179.1 mouse_genomes_project 6 70859423 70859959 - MGP_129S1SvImJ_P0000232 Igkv6-13 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000233.1 MGP_129S1SvImJ_G0000179.1 mouse_genomes_project 6 70859423 70859710 - MGP_129S1SvImJ_P0000233 Igkv6-13 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0077781.1 MGP_129S1SvImJ_G0030806.1 mouse_genomes_project 6 57425047 57426143 - MGP_129S1SvImJ_P0077781 Vmn1r22 protein_coding protein_coding MGP_129S1SvImJ_T0079496.1 MGP_129S1SvImJ_G0031156.1 mouse_genomes_project 6 118460677 118482806 - MGP_129S1SvImJ_P0079496 Efcab12 protein_coding protein_coding MGP_129S1SvImJ_T0079497.1 MGP_129S1SvImJ_G0031156.1 mouse_genomes_project 6 118460844 118482806 - MGP_129S1SvImJ_P0079497 Efcab12 protein_coding protein_coding MGP_129S1SvImJ_T0079498.1 MGP_129S1SvImJ_G0031156.1 mouse_genomes_project 6 118460844 118482806 - MGP_129S1SvImJ_P0079498 Efcab12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0008543.1 MGP_129S1SvImJ_G0006918.1 mouse_genomes_project 6 28794790 28842136 + 4930412F09Rik lincRNA lincRNA MGP_129S1SvImJ_T0004985.1 MGP_129S1SvImJ_G0004277.1 mouse_genomes_project 6 54043886 54045728 - antisense antisense MGP_129S1SvImJ_T0080434.1 MGP_129S1SvImJ_G0031346.1 mouse_genomes_project 6 133067779 133075829 + MGP_129S1SvImJ_P0080434 Clec1b protein_coding protein_coding MGP_129S1SvImJ_T0080435.1 MGP_129S1SvImJ_G0031346.1 mouse_genomes_project 6 133068089 133075759 + MGP_129S1SvImJ_P0080435 Clec1b protein_coding protein_coding MGP_129S1SvImJ_T0080436.1 MGP_129S1SvImJ_G0031346.1 mouse_genomes_project 6 133068092 133075755 + MGP_129S1SvImJ_P0080436 Clec1b protein_coding protein_coding MGP_129S1SvImJ_T0080437.1 MGP_129S1SvImJ_G0031346.1 mouse_genomes_project 6 133074031 133079808 + Clec1b protein_coding retained_intron MGP_129S1SvImJ_T0015571.1 MGP_129S1SvImJ_G0013660.1 mouse_genomes_project 6 117709054 117709385 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005045.1 MGP_129S1SvImJ_G0004314.1 mouse_genomes_project 6 89609357 89612434 - 1700031F10Rik antisense antisense MGP_129S1SvImJ_T0005046.1 MGP_129S1SvImJ_G0004314.1 mouse_genomes_project 6 89609359 89610395 - 1700031F10Rik antisense antisense MGP_129S1SvImJ_T0102649.1 MGP_129S1SvImJ_G0040482.1 mouse_genomes_project 6 135034323 135035927 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102600.1 MGP_129S1SvImJ_G0040433.1 mouse_genomes_project 6 40007185 40008716 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0077788.1 MGP_129S1SvImJ_G0030813.1 mouse_genomes_project 6 57862158 57863243 + MGP_129S1SvImJ_P0077788 Vmn1r28 protein_coding protein_coding MGP_129S1SvImJ_T0008795.1 MGP_129S1SvImJ_G0007103.1 mouse_genomes_project 6 153279812 153281019 - Gm17216 lincRNA lincRNA MGP_129S1SvImJ_T0008629.1 MGP_129S1SvImJ_G0006977.1 mouse_genomes_project 6 60818669 60823221 - Gm43893 lincRNA lincRNA MGP_129S1SvImJ_T0015307.1 MGP_129S1SvImJ_G0013396.1 mouse_genomes_project 6 26082442 26083694 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002015.1 MGP_129S1SvImJ_G0001928.1 mouse_genomes_project 6 56370602 56371274 - TEC TEC MGP_129S1SvImJ_T0011667.1 MGP_129S1SvImJ_G0009783.1 mouse_genomes_project 6 51489455 51489688 + Gm27817 misc_RNA misc_RNA MGP_129S1SvImJ_T0000343.1 MGP_129S1SvImJ_G0000285.1 mouse_genomes_project 6 70679388 70679954 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0001975.1 MGP_129S1SvImJ_G0001888.1 mouse_genomes_project 6 38469749 38471463 + TEC TEC MGP_129S1SvImJ_T0102648.1 MGP_129S1SvImJ_G0040481.1 mouse_genomes_project 6 134932960 134948436 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002069.1 MGP_129S1SvImJ_G0001982.1 mouse_genomes_project 6 87528150 87530510 - TEC TEC MGP_129S1SvImJ_T0015608.1 MGP_129S1SvImJ_G0013697.1 mouse_genomes_project 6 128270003 128270448 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015679.1 MGP_129S1SvImJ_G0013768.1 mouse_genomes_project 6 151677102 151677450 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008623.1 MGP_129S1SvImJ_G0006972.1 mouse_genomes_project 6 56033013 56110204 - Gm8239 lincRNA lincRNA MGP_129S1SvImJ_T0008783.1 MGP_129S1SvImJ_G0007094.1 mouse_genomes_project 6 150234644 150235987 + Gm15706 lincRNA lincRNA MGP_129S1SvImJ_T0079584.1 MGP_129S1SvImJ_G0031168.1 mouse_genomes_project 6 119161924 119166957 + MGP_129S1SvImJ_P0079584 Olfr211 protein_coding protein_coding MGP_129S1SvImJ_T0079585.1 MGP_129S1SvImJ_G0031168.1 mouse_genomes_project 6 119166027 119166957 + MGP_129S1SvImJ_P0079585 Olfr211 protein_coding protein_coding MGP_129S1SvImJ_T0015301.1 MGP_129S1SvImJ_G0013390.1 mouse_genomes_project 6 20311512 20312207 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000329.1 MGP_129S1SvImJ_G0000271.1 mouse_genomes_project 6 69611046 69611522 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0015336.1 MGP_129S1SvImJ_G0013425.1 mouse_genomes_project 6 41266272 41266438 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077642.1 MGP_129S1SvImJ_G0030761.1 mouse_genomes_project 6 53856298 53864483 - MGP_129S1SvImJ_P0077642 Scrn1 protein_coding protein_coding MGP_129S1SvImJ_T0077643.1 MGP_129S1SvImJ_G0030761.1 mouse_genomes_project 6 53861023 53921359 - MGP_129S1SvImJ_P0077643 Scrn1 protein_coding protein_coding MGP_129S1SvImJ_T0077644.1 MGP_129S1SvImJ_G0030761.1 mouse_genomes_project 6 53861398 53875827 - MGP_129S1SvImJ_P0077644 Scrn1 protein_coding protein_coding MGP_129S1SvImJ_T0077645.1 MGP_129S1SvImJ_G0030761.1 mouse_genomes_project 6 53864229 53869939 - Scrn1 protein_coding retained_intron MGP_129S1SvImJ_T0077646.1 MGP_129S1SvImJ_G0030761.1 mouse_genomes_project 6 53889462 53909335 - MGP_129S1SvImJ_P0077646 Scrn1 protein_coding protein_coding MGP_129S1SvImJ_T0077647.1 MGP_129S1SvImJ_G0030761.1 mouse_genomes_project 6 53906597 53909326 - Scrn1 protein_coding processed_transcript MGP_129S1SvImJ_T0079964.1 MGP_129S1SvImJ_G0031244.1 mouse_genomes_project 6 126438929 126447011 - MGP_129S1SvImJ_P0079964 Clec4e protein_coding protein_coding MGP_129S1SvImJ_T0079965.1 MGP_129S1SvImJ_G0031244.1 mouse_genomes_project 6 126439089 126447010 - Clec4e protein_coding retained_intron MGP_129S1SvImJ_T0079966.1 MGP_129S1SvImJ_G0031244.1 mouse_genomes_project 6 126439285 126447011 - Clec4e protein_coding retained_intron MGP_129S1SvImJ_T0079967.1 MGP_129S1SvImJ_G0031244.1 mouse_genomes_project 6 126439808 126447011 - Clec4e protein_coding retained_intron MGP_129S1SvImJ_T0079968.1 MGP_129S1SvImJ_G0031244.1 mouse_genomes_project 6 126440631 126447011 - MGP_129S1SvImJ_P0079968 Clec4e protein_coding protein_coding MGP_129S1SvImJ_T0079969.1 MGP_129S1SvImJ_G0031244.1 mouse_genomes_project 6 126440834 126447007 - MGP_129S1SvImJ_P0079969 Clec4e protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079970.1 MGP_129S1SvImJ_G0031244.1 mouse_genomes_project 6 126444917 126447011 - Clec4e protein_coding processed_transcript MGP_129S1SvImJ_T0008749.1 MGP_129S1SvImJ_G0007075.1 mouse_genomes_project 6 132866158 132898244 - 2310001H17Rik lincRNA lincRNA MGP_129S1SvImJ_T0008750.1 MGP_129S1SvImJ_G0007075.1 mouse_genomes_project 6 132870378 132893418 - 2310001H17Rik lincRNA lincRNA MGP_129S1SvImJ_T0008751.1 MGP_129S1SvImJ_G0007075.1 mouse_genomes_project 6 132873993 132898287 - 2310001H17Rik lincRNA lincRNA MGP_129S1SvImJ_T0008752.1 MGP_129S1SvImJ_G0007075.1 mouse_genomes_project 6 132890310 132899021 - 2310001H17Rik lincRNA lincRNA MGP_129S1SvImJ_T0008753.1 MGP_129S1SvImJ_G0007075.1 mouse_genomes_project 6 132890370 132898778 - 2310001H17Rik lincRNA lincRNA MGP_129S1SvImJ_T0008754.1 MGP_129S1SvImJ_G0007075.1 mouse_genomes_project 6 132890475 132893427 - 2310001H17Rik lincRNA lincRNA MGP_129S1SvImJ_T0079974.1 MGP_129S1SvImJ_G0031248.1 mouse_genomes_project 6 126801214 126848213 - MGP_129S1SvImJ_P0079974 protein_coding protein_coding MGP_129S1SvImJ_T0080856.1 MGP_129S1SvImJ_G0031464.1 mouse_genomes_project 6 147200966 147207112 + MGP_129S1SvImJ_P0080856 Spx protein_coding protein_coding MGP_129S1SvImJ_T0080857.1 MGP_129S1SvImJ_G0031464.1 mouse_genomes_project 6 147200966 147207112 + MGP_129S1SvImJ_P0080857 Spx protein_coding unknown_likely_coding MGP_129S1SvImJ_T0080858.1 MGP_129S1SvImJ_G0031464.1 mouse_genomes_project 6 147201537 147208271 + Spx protein_coding retained_intron MGP_129S1SvImJ_T0080859.1 MGP_129S1SvImJ_G0031464.1 mouse_genomes_project 6 147202046 147208271 + Spx protein_coding retained_intron MGP_129S1SvImJ_T0101227.1 MGP_129S1SvImJ_G0039294.1 mouse_genomes_project 6 5440411 5440532 - Gm26075 snoRNA snoRNA MGP_129S1SvImJ_T0015394.1 MGP_129S1SvImJ_G0013483.1 mouse_genomes_project 6 62400398 62401530 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077945.1 MGP_129S1SvImJ_G0030852.1 mouse_genomes_project 6 71581927 71598194 - MGP_129S1SvImJ_P0077945 Thnsl2 protein_coding protein_coding MGP_129S1SvImJ_T0077946.1 MGP_129S1SvImJ_G0030852.1 mouse_genomes_project 6 71582159 71598102 - MGP_129S1SvImJ_P0077946 Thnsl2 protein_coding protein_coding MGP_129S1SvImJ_T0077947.1 MGP_129S1SvImJ_G0030852.1 mouse_genomes_project 6 71582417 71585738 - MGP_129S1SvImJ_P0077947 Thnsl2 protein_coding protein_coding MGP_129S1SvImJ_T0077948.1 MGP_129S1SvImJ_G0030852.1 mouse_genomes_project 6 71585531 71598086 - Thnsl2 protein_coding processed_transcript MGP_129S1SvImJ_T0018348.1 MGP_129S1SvImJ_G0015650.1 mouse_genomes_project 6 128858545 128874637 + Gm26728 processed_transcript antisense MGP_129S1SvImJ_T0018349.1 MGP_129S1SvImJ_G0015650.1 mouse_genomes_project 6 128858549 128860091 + Gm26728 processed_transcript retained_intron MGP_129S1SvImJ_T0018350.1 MGP_129S1SvImJ_G0015650.1 mouse_genomes_project 6 128858551 128865179 + Gm26728 processed_transcript antisense MGP_129S1SvImJ_T0004989.1 MGP_129S1SvImJ_G0004281.1 mouse_genomes_project 6 63168359 63172069 - Gm44071 antisense antisense MGP_129S1SvImJ_T0015639.1 MGP_129S1SvImJ_G0013728.1 mouse_genomes_project 6 134611635 134670366 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078230.1 MGP_129S1SvImJ_G0030912.1 mouse_genomes_project 6 84058203 84061491 + MGP_129S1SvImJ_P0078230 Aup1 protein_coding protein_coding MGP_129S1SvImJ_T0078231.1 MGP_129S1SvImJ_G0030912.1 mouse_genomes_project 6 84058328 84061369 + Aup1 protein_coding retained_intron MGP_129S1SvImJ_T0078232.1 MGP_129S1SvImJ_G0030912.1 mouse_genomes_project 6 84058396 84060068 + Aup1 protein_coding retained_intron MGP_129S1SvImJ_T0078233.1 MGP_129S1SvImJ_G0030912.1 mouse_genomes_project 6 84058411 84060038 + Aup1 protein_coding retained_intron MGP_129S1SvImJ_T0078234.1 MGP_129S1SvImJ_G0030912.1 mouse_genomes_project 6 84058413 84058852 + Aup1 protein_coding retained_intron MGP_129S1SvImJ_T0078235.1 MGP_129S1SvImJ_G0030912.1 mouse_genomes_project 6 84058413 84061361 + MGP_129S1SvImJ_P0078235 Aup1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078236.1 MGP_129S1SvImJ_G0030912.1 mouse_genomes_project 6 84058418 84060117 + MGP_129S1SvImJ_P0078236 Aup1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078237.1 MGP_129S1SvImJ_G0030912.1 mouse_genomes_project 6 84058420 84059198 + Aup1 protein_coding retained_intron MGP_129S1SvImJ_T0078238.1 MGP_129S1SvImJ_G0030912.1 mouse_genomes_project 6 84058430 84061365 + MGP_129S1SvImJ_P0078238 Aup1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078239.1 MGP_129S1SvImJ_G0030912.1 mouse_genomes_project 6 84058437 84059971 + Aup1 protein_coding retained_intron MGP_129S1SvImJ_T0078240.1 MGP_129S1SvImJ_G0030912.1 mouse_genomes_project 6 84059073 84059800 + Aup1 protein_coding retained_intron MGP_129S1SvImJ_T0078241.1 MGP_129S1SvImJ_G0030912.1 mouse_genomes_project 6 84059396 84059996 + Aup1 protein_coding retained_intron MGP_129S1SvImJ_T0078242.1 MGP_129S1SvImJ_G0030912.1 mouse_genomes_project 6 84060092 84061327 + Aup1 protein_coding retained_intron MGP_129S1SvImJ_T0078243.1 MGP_129S1SvImJ_G0030912.1 mouse_genomes_project 6 84060194 84060520 + Aup1 protein_coding retained_intron MGP_129S1SvImJ_T0078244.1 MGP_129S1SvImJ_G0030912.1 mouse_genomes_project 6 84060530 84061076 + Aup1 protein_coding retained_intron MGP_129S1SvImJ_T0078245.1 MGP_129S1SvImJ_G0030912.1 mouse_genomes_project 6 84060535 84061365 + Aup1 protein_coding retained_intron MGP_129S1SvImJ_T0078246.1 MGP_129S1SvImJ_G0030912.1 mouse_genomes_project 6 84060903 84061359 + Aup1 protein_coding retained_intron MGP_129S1SvImJ_T0078249.1 MGP_129S1SvImJ_G0030914.1 mouse_genomes_project 6 84071841 84073743 - MGP_129S1SvImJ_P0078249 Tlx2 protein_coding protein_coding MGP_129S1SvImJ_T0078250.1 MGP_129S1SvImJ_G0030914.1 mouse_genomes_project 6 84072108 84073811 - MGP_129S1SvImJ_P0078250 Tlx2 protein_coding protein_coding MGP_129S1SvImJ_T0002119.1 MGP_129S1SvImJ_G0002032.1 mouse_genomes_project 6 102141249 102141641 - TEC TEC MGP_129S1SvImJ_T0008742.1 MGP_129S1SvImJ_G0007068.1 mouse_genomes_project 6 131177463 131191020 + Gm43634 lincRNA lincRNA MGP_129S1SvImJ_T0008618.1 MGP_129S1SvImJ_G0006968.1 mouse_genomes_project 6 53148923 53151100 + Gm16499 lincRNA lincRNA MGP_129S1SvImJ_T0008619.1 MGP_129S1SvImJ_G0006968.1 mouse_genomes_project 6 53148924 53148990 + Gm16499 lincRNA lincRNA MGP_129S1SvImJ_T0005040.1 MGP_129S1SvImJ_G0004311.1 mouse_genomes_project 6 89091062 89092247 - Gm44210 antisense antisense MGP_129S1SvImJ_T0015321.1 MGP_129S1SvImJ_G0013410.1 mouse_genomes_project 6 36129972 36130697 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077852.1 MGP_129S1SvImJ_G0030828.1 mouse_genomes_project 6 64645009 64647130 + MGP_129S1SvImJ_P0077852 Atoh1 protein_coding protein_coding MGP_129S1SvImJ_T0102611.1 MGP_129S1SvImJ_G0040444.1 mouse_genomes_project 6 56817244 56818133 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015559.1 MGP_129S1SvImJ_G0013648.1 mouse_genomes_project 6 115447166 115447337 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080978.1 MGP_129S1SvImJ_G0031485.1 mouse_genomes_project 6 151101943 151515423 - MGP_129S1SvImJ_P0080978 Itpr2 protein_coding protein_coding MGP_129S1SvImJ_T0080979.1 MGP_129S1SvImJ_G0031485.1 mouse_genomes_project 6 151105124 151515157 - MGP_129S1SvImJ_P0080979 Itpr2 protein_coding protein_coding MGP_129S1SvImJ_T0080980.1 MGP_129S1SvImJ_G0031485.1 mouse_genomes_project 6 151114243 151141750 - Itpr2 protein_coding processed_transcript MGP_129S1SvImJ_T0080981.1 MGP_129S1SvImJ_G0031485.1 mouse_genomes_project 6 151174741 151224580 - MGP_129S1SvImJ_P0080981 Itpr2 protein_coding protein_coding MGP_129S1SvImJ_T0080982.1 MGP_129S1SvImJ_G0031485.1 mouse_genomes_project 6 151174816 151191343 - Itpr2 protein_coding processed_transcript MGP_129S1SvImJ_T0080983.1 MGP_129S1SvImJ_G0031485.1 mouse_genomes_project 6 151229341 151230845 - Itpr2 protein_coding retained_intron MGP_129S1SvImJ_T0080984.1 MGP_129S1SvImJ_G0031485.1 mouse_genomes_project 6 151284636 151288439 - Itpr2 protein_coding retained_intron MGP_129S1SvImJ_T0080985.1 MGP_129S1SvImJ_G0031485.1 mouse_genomes_project 6 151358507 151403701 - MGP_129S1SvImJ_P0080985 Itpr2 protein_coding protein_coding MGP_129S1SvImJ_T0080986.1 MGP_129S1SvImJ_G0031485.1 mouse_genomes_project 6 151375229 151515468 - MGP_129S1SvImJ_P0080986 Itpr2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080987.1 MGP_129S1SvImJ_G0031485.1 mouse_genomes_project 6 151385368 151515423 - Itpr2 protein_coding retained_intron MGP_129S1SvImJ_T0080988.1 MGP_129S1SvImJ_G0031485.1 mouse_genomes_project 6 151431077 151515123 - Itpr2 protein_coding processed_transcript MGP_129S1SvImJ_T0005120.1 MGP_129S1SvImJ_G0004370.1 mouse_genomes_project 6 132700623 132704186 - Gm44000 antisense antisense MGP_129S1SvImJ_T0102624.1 MGP_129S1SvImJ_G0040457.1 mouse_genomes_project 6 60798852 60799117 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0000313.1 MGP_129S1SvImJ_G0000255.1 mouse_genomes_project 6 68548953 68549420 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0011677.1 MGP_129S1SvImJ_G0009793.1 mouse_genomes_project 6 84729252 84729718 + Gm27631 misc_RNA misc_RNA MGP_129S1SvImJ_T0079728.1 MGP_129S1SvImJ_G0031197.1 mouse_genomes_project 6 122742070 122754706 + Rad52 protein_coding processed_transcript MGP_129S1SvImJ_T0079729.1 MGP_129S1SvImJ_G0031197.1 mouse_genomes_project 6 122742075 122765416 + MGP_129S1SvImJ_P0079729 Rad52 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079730.1 MGP_129S1SvImJ_G0031197.1 mouse_genomes_project 6 122742077 122753095 + Rad52 protein_coding retained_intron MGP_129S1SvImJ_T0079731.1 MGP_129S1SvImJ_G0031197.1 mouse_genomes_project 6 122742077 122752468 + Rad52 protein_coding processed_transcript MGP_129S1SvImJ_T0079732.1 MGP_129S1SvImJ_G0031197.1 mouse_genomes_project 6 122742100 122761874 + Rad52 protein_coding retained_intron MGP_129S1SvImJ_T0079733.1 MGP_129S1SvImJ_G0031197.1 mouse_genomes_project 6 122742106 122759733 + Rad52 protein_coding processed_transcript MGP_129S1SvImJ_T0079734.1 MGP_129S1SvImJ_G0031197.1 mouse_genomes_project 6 122742106 122759733 + Rad52 protein_coding processed_transcript MGP_129S1SvImJ_T0079735.1 MGP_129S1SvImJ_G0031197.1 mouse_genomes_project 6 122742111 122761372 + Rad52 protein_coding retained_intron MGP_129S1SvImJ_T0079736.1 MGP_129S1SvImJ_G0031197.1 mouse_genomes_project 6 122742148 122765411 + MGP_129S1SvImJ_P0079736 Rad52 protein_coding protein_coding MGP_129S1SvImJ_T0079737.1 MGP_129S1SvImJ_G0031197.1 mouse_genomes_project 6 122742419 122765121 + MGP_129S1SvImJ_P0079737 Rad52 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0079738.1 MGP_129S1SvImJ_G0031197.1 mouse_genomes_project 6 122752608 122753589 + Rad52 protein_coding retained_intron MGP_129S1SvImJ_T0079739.1 MGP_129S1SvImJ_G0031197.1 mouse_genomes_project 6 122753321 122759351 + Rad52 protein_coding retained_intron MGP_129S1SvImJ_T0079740.1 MGP_129S1SvImJ_G0031197.1 mouse_genomes_project 6 122754622 122759496 + Rad52 protein_coding retained_intron MGP_129S1SvImJ_T0079741.1 MGP_129S1SvImJ_G0031197.1 mouse_genomes_project 6 122758646 122762148 + Rad52 protein_coding retained_intron MGP_129S1SvImJ_T0077750.1 MGP_129S1SvImJ_G0030789.1 mouse_genomes_project 6 56589574 56597927 + MGP_129S1SvImJ_P0077750 protein_coding protein_coding MGP_129S1SvImJ_T0008670.1 MGP_129S1SvImJ_G0007011.1 mouse_genomes_project 6 89035587 89050570 - 1810020O05Rik lincRNA lincRNA MGP_129S1SvImJ_T0015534.1 MGP_129S1SvImJ_G0013623.1 mouse_genomes_project 6 103222225 103222465 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008617.1 MGP_129S1SvImJ_G0006967.1 mouse_genomes_project 6 52532212 52536911 + Gm4872 lincRNA lincRNA MGP_129S1SvImJ_T0008737.1 MGP_129S1SvImJ_G0007063.1 mouse_genomes_project 6 127626351 127628995 + Gm44006 lincRNA lincRNA MGP_129S1SvImJ_T0077352.1 MGP_129S1SvImJ_G0030693.1 mouse_genomes_project 6 47364362 47380700 - MGP_129S1SvImJ_P0077352 Zfp467 protein_coding protein_coding MGP_129S1SvImJ_T0077353.1 MGP_129S1SvImJ_G0030693.1 mouse_genomes_project 6 47364362 47383312 - MGP_129S1SvImJ_P0077353 Zfp467 protein_coding protein_coding MGP_129S1SvImJ_T0077354.1 MGP_129S1SvImJ_G0030693.1 mouse_genomes_project 6 47364362 47383415 - MGP_129S1SvImJ_P0077354 Zfp467 protein_coding protein_coding MGP_129S1SvImJ_T0077355.1 MGP_129S1SvImJ_G0030693.1 mouse_genomes_project 6 47370815 47383221 - MGP_129S1SvImJ_P0077355 Zfp467 protein_coding protein_coding MGP_129S1SvImJ_T0077356.1 MGP_129S1SvImJ_G0030693.1 mouse_genomes_project 6 47373292 47383377 - MGP_129S1SvImJ_P0077356 Zfp467 protein_coding protein_coding MGP_129S1SvImJ_T0077357.1 MGP_129S1SvImJ_G0030693.1 mouse_genomes_project 6 47376061 47383206 - MGP_129S1SvImJ_P0077357 Zfp467 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077358.1 MGP_129S1SvImJ_G0030693.1 mouse_genomes_project 6 47379427 47383342 - Zfp467 protein_coding retained_intron MGP_129S1SvImJ_T0076601.1 MGP_129S1SvImJ_G0030517.1 mouse_genomes_project 6 27054001 27056700 + MGP_129S1SvImJ_P0076601 Hilpda protein_coding protein_coding MGP_129S1SvImJ_T0076602.1 MGP_129S1SvImJ_G0030517.1 mouse_genomes_project 6 27054139 27056960 + MGP_129S1SvImJ_P0076602 Hilpda protein_coding protein_coding MGP_129S1SvImJ_T0002588.1 MGP_129S1SvImJ_G0002490.1 mouse_genomes_project 6 40042544 40042594 + MGP_129S1SvImJ_P0002588 Trbj1-5 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0000212.1 MGP_129S1SvImJ_G0000163.1 mouse_genomes_project 6 70385153 70385720 - MGP_129S1SvImJ_P0000212 Igkv8-34 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0010795.1 MGP_129S1SvImJ_G0008911.1 mouse_genomes_project 6 82864535 82864609 - Mir7232 miRNA miRNA MGP_129S1SvImJ_T0015509.1 MGP_129S1SvImJ_G0013598.1 mouse_genomes_project 6 93912474 93912630 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002120.1 MGP_129S1SvImJ_G0002033.1 mouse_genomes_project 6 102269154 102271674 - TEC TEC MGP_129S1SvImJ_T0076140.1 MGP_129S1SvImJ_G0030422.1 mouse_genomes_project 6 420696 500075 - MGP_129S1SvImJ_P0076140 Calcr protein_coding protein_coding MGP_129S1SvImJ_T0076141.1 MGP_129S1SvImJ_G0030422.1 mouse_genomes_project 6 420736 501159 - MGP_129S1SvImJ_P0076141 Calcr protein_coding protein_coding MGP_129S1SvImJ_T0076142.1 MGP_129S1SvImJ_G0030422.1 mouse_genomes_project 6 420749 501103 - MGP_129S1SvImJ_P0076142 Calcr protein_coding protein_coding MGP_129S1SvImJ_T0076143.1 MGP_129S1SvImJ_G0030422.1 mouse_genomes_project 6 421838 489389 - MGP_129S1SvImJ_P0076143 Calcr protein_coding protein_coding MGP_129S1SvImJ_T0076144.1 MGP_129S1SvImJ_G0030422.1 mouse_genomes_project 6 421838 489389 - MGP_129S1SvImJ_P0076144 Calcr protein_coding protein_coding MGP_129S1SvImJ_T0008708.1 MGP_129S1SvImJ_G0007038.1 mouse_genomes_project 6 107856477 107861029 - Gm15631 lincRNA lincRNA MGP_129S1SvImJ_T0102664.1 MGP_129S1SvImJ_G0040497.1 mouse_genomes_project 6 137861159 137863121 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0001938.1 MGP_129S1SvImJ_G0001851.1 mouse_genomes_project 6 2122876 2124702 + TEC TEC MGP_129S1SvImJ_T0078713.1 MGP_129S1SvImJ_G0031004.1 mouse_genomes_project 6 89359910 89361071 - MGP_129S1SvImJ_P0078713 H1fx protein_coding protein_coding MGP_129S1SvImJ_T0010772.1 MGP_129S1SvImJ_G0008888.1 mouse_genomes_project 6 28017358 28017433 - Mir182 miRNA miRNA MGP_129S1SvImJ_T0008792.1 MGP_129S1SvImJ_G0007101.1 mouse_genomes_project 6 152761452 152773577 + 1700049E15Rik lincRNA lincRNA MGP_129S1SvImJ_T0008793.1 MGP_129S1SvImJ_G0007101.1 mouse_genomes_project 6 152765938 152773551 + 1700049E15Rik lincRNA lincRNA MGP_129S1SvImJ_T0080521.1 MGP_129S1SvImJ_G0031383.1 mouse_genomes_project 6 136814364 136815294 - MGP_129S1SvImJ_P0080521 Tas2r122 protein_coding protein_coding MGP_129S1SvImJ_T0078043.1 MGP_129S1SvImJ_G0030871.1 mouse_genomes_project 6 72894810 72898710 + 0610030E20Rik protein_coding retained_intron MGP_129S1SvImJ_T0078044.1 MGP_129S1SvImJ_G0030871.1 mouse_genomes_project 6 72894819 72896669 + 0610030E20Rik protein_coding retained_intron MGP_129S1SvImJ_T0078045.1 MGP_129S1SvImJ_G0030871.1 mouse_genomes_project 6 72894827 72900558 + MGP_129S1SvImJ_P0078045 0610030E20Rik protein_coding protein_coding MGP_129S1SvImJ_T0078046.1 MGP_129S1SvImJ_G0030871.1 mouse_genomes_project 6 72894860 72898111 + 0610030E20Rik protein_coding retained_intron MGP_129S1SvImJ_T0002052.1 MGP_129S1SvImJ_G0001965.1 mouse_genomes_project 6 81091668 81094370 + TEC TEC MGP_129S1SvImJ_T0077120.1 MGP_129S1SvImJ_G0030609.1 mouse_genomes_project 6 38951786 38952859 + MGP_129S1SvImJ_P0077120 Tas2r137 protein_coding protein_coding MGP_129S1SvImJ_T0002088.1 MGP_129S1SvImJ_G0002001.1 mouse_genomes_project 6 89372581 89373625 - TEC TEC MGP_129S1SvImJ_T0077598.1 MGP_129S1SvImJ_G0030754.1 mouse_genomes_project 6 52059110 52204064 - Jazf1 protein_coding processed_transcript MGP_129S1SvImJ_T0077599.1 MGP_129S1SvImJ_G0030754.1 mouse_genomes_project 6 52059110 52068623 - Jazf1 protein_coding processed_transcript MGP_129S1SvImJ_T0077600.1 MGP_129S1SvImJ_G0030754.1 mouse_genomes_project 6 52059110 52370684 - MGP_129S1SvImJ_P0077600 Jazf1 protein_coding protein_coding MGP_129S1SvImJ_T0102646.1 MGP_129S1SvImJ_G0040479.1 mouse_genomes_project 6 134228967 134246816 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0008574.1 MGP_129S1SvImJ_G0006940.1 mouse_genomes_project 6 33745539 33750120 - Gm42931 lincRNA lincRNA MGP_129S1SvImJ_T0010804.1 MGP_129S1SvImJ_G0008920.1 mouse_genomes_project 6 89488370 89488501 - Mir6376 miRNA miRNA MGP_129S1SvImJ_T0015397.1 MGP_129S1SvImJ_G0013486.1 mouse_genomes_project 6 62659010 62659536 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077068.1 MGP_129S1SvImJ_G0030598.1 mouse_genomes_project 6 37849032 37957084 - MGP_129S1SvImJ_P0077068 Dennd2a protein_coding protein_coding MGP_129S1SvImJ_T0077069.1 MGP_129S1SvImJ_G0030598.1 mouse_genomes_project 6 37850074 37888606 - MGP_129S1SvImJ_P0077069 Dennd2a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0077070.1 MGP_129S1SvImJ_G0030598.1 mouse_genomes_project 6 37851472 37879074 - Dennd2a protein_coding retained_intron MGP_129S1SvImJ_T0077071.1 MGP_129S1SvImJ_G0030598.1 mouse_genomes_project 6 37856456 37858577 - Dennd2a protein_coding retained_intron MGP_129S1SvImJ_T0077072.1 MGP_129S1SvImJ_G0030598.1 mouse_genomes_project 6 37873018 37876364 - Dennd2a protein_coding retained_intron MGP_129S1SvImJ_T0077073.1 MGP_129S1SvImJ_G0030598.1 mouse_genomes_project 6 37888568 37957084 - MGP_129S1SvImJ_P0077073 Dennd2a protein_coding protein_coding MGP_129S1SvImJ_T0080275.1 MGP_129S1SvImJ_G0031307.1 mouse_genomes_project 6 130353789 130396598 - MGP_129S1SvImJ_P0080275 Dyrk4 protein_coding protein_coding MGP_129S1SvImJ_T0080276.1 MGP_129S1SvImJ_G0031307.1 mouse_genomes_project 6 130353962 130363154 - MGP_129S1SvImJ_P0080276 Dyrk4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080277.1 MGP_129S1SvImJ_G0031307.1 mouse_genomes_project 6 130353968 130382263 - Dyrk4 protein_coding processed_transcript MGP_129S1SvImJ_T0101262.1 MGP_129S1SvImJ_G0039329.1 mouse_genomes_project 6 82767974 82768092 + Gm22530 snoRNA snoRNA MGP_129S1SvImJ_T0010789.1 MGP_129S1SvImJ_G0008905.1 mouse_genomes_project 6 54952905 54953015 + Gm44352 miRNA miRNA MGP_129S1SvImJ_T0008699.1 MGP_129S1SvImJ_G0007031.1 mouse_genomes_project 6 102538213 102539607 + Gm44107 lincRNA lincRNA MGP_129S1SvImJ_T0076864.1 MGP_129S1SvImJ_G0030559.1 mouse_genomes_project 6 32493797 32504611 + MGP_129S1SvImJ_P0076864 Akr1b7 protein_coding protein_coding MGP_129S1SvImJ_T0080514.1 MGP_129S1SvImJ_G0031378.1 mouse_genomes_project 6 136533639 136541499 - MGP_129S1SvImJ_P0080514 Prb1 protein_coding protein_coding MGP_129S1SvImJ_T0077658.1 MGP_129S1SvImJ_G0030765.1 mouse_genomes_project 6 54190988 54278677 + MGP_129S1SvImJ_P0077658 Znrf2 protein_coding protein_coding MGP_129S1SvImJ_T0077659.1 MGP_129S1SvImJ_G0030765.1 mouse_genomes_project 6 54194030 54263594 + MGP_129S1SvImJ_P0077659 Znrf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077660.1 MGP_129S1SvImJ_G0030765.1 mouse_genomes_project 6 54195081 54270288 + MGP_129S1SvImJ_P0077660 Znrf2 protein_coding protein_coding MGP_129S1SvImJ_T0079650.1 MGP_129S1SvImJ_G0031185.1 mouse_genomes_project 6 121130998 121175329 - MGP_129S1SvImJ_P0079650 Bms1 protein_coding protein_coding MGP_129S1SvImJ_T0079651.1 MGP_129S1SvImJ_G0031185.1 mouse_genomes_project 6 121144164 121175259 - Bms1 protein_coding retained_intron MGP_129S1SvImJ_T0079652.1 MGP_129S1SvImJ_G0031185.1 mouse_genomes_project 6 121169688 121175267 - Bms1 protein_coding processed_transcript MGP_129S1SvImJ_T0015284.1 MGP_129S1SvImJ_G0013373.1 mouse_genomes_project 6 14132485 14134181 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076960.1 MGP_129S1SvImJ_G0030576.1 mouse_genomes_project 6 35534093 35657702 - MGP_129S1SvImJ_P0076960 Creb3l2 protein_coding protein_coding MGP_129S1SvImJ_T0076961.1 MGP_129S1SvImJ_G0030576.1 mouse_genomes_project 6 35541346 35543590 - Creb3l2 protein_coding processed_transcript MGP_129S1SvImJ_T0010806.1 MGP_129S1SvImJ_G0008922.1 mouse_genomes_project 6 96373638 96373690 - Mir7041 miRNA miRNA MGP_129S1SvImJ_T0078851.1 MGP_129S1SvImJ_G0031035.1 mouse_genomes_project 6 91860729 91892066 + MGP_129S1SvImJ_P0078851 Uroc1 protein_coding protein_coding MGP_129S1SvImJ_T0078852.1 MGP_129S1SvImJ_G0031035.1 mouse_genomes_project 6 91860734 91892061 + MGP_129S1SvImJ_P0078852 Uroc1 protein_coding protein_coding MGP_129S1SvImJ_T0015471.1 MGP_129S1SvImJ_G0013560.1 mouse_genomes_project 6 78882287 78883307 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079947.1 MGP_129S1SvImJ_G0031239.1 mouse_genomes_project 6 126191202 126216697 + MGP_129S1SvImJ_P0079947 Clec4b1 protein_coding protein_coding MGP_129S1SvImJ_T0079948.1 MGP_129S1SvImJ_G0031239.1 mouse_genomes_project 6 126191238 126216708 + MGP_129S1SvImJ_P0079948 Clec4b1 protein_coding protein_coding MGP_129S1SvImJ_T0015450.1 MGP_129S1SvImJ_G0013539.1 mouse_genomes_project 6 70834801 70836698 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015436.1 MGP_129S1SvImJ_G0013525.1 mouse_genomes_project 6 67848096 67849450 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077667.1 MGP_129S1SvImJ_G0030767.1 mouse_genomes_project 6 54372107 54384735 - MGP_129S1SvImJ_P0077667 Ggct protein_coding protein_coding MGP_129S1SvImJ_T0077668.1 MGP_129S1SvImJ_G0030767.1 mouse_genomes_project 6 54375200 54384492 - Ggct protein_coding processed_transcript MGP_129S1SvImJ_T0077669.1 MGP_129S1SvImJ_G0030767.1 mouse_genomes_project 6 54375484 54384646 - MGP_129S1SvImJ_P0077669 Ggct protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077670.1 MGP_129S1SvImJ_G0030767.1 mouse_genomes_project 6 54375508 54384648 - MGP_129S1SvImJ_P0077670 Ggct protein_coding protein_coding MGP_129S1SvImJ_T0077671.1 MGP_129S1SvImJ_G0030767.1 mouse_genomes_project 6 54376033 54384648 - Ggct protein_coding retained_intron MGP_129S1SvImJ_T0077672.1 MGP_129S1SvImJ_G0030767.1 mouse_genomes_project 6 54380922 54384409 - Ggct protein_coding retained_intron MGP_129S1SvImJ_T0015297.1 MGP_129S1SvImJ_G0013386.1 mouse_genomes_project 6 20135933 20136709 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005148.1 MGP_129S1SvImJ_G0004395.1 mouse_genomes_project 6 150982610 150993993 - antisense antisense MGP_129S1SvImJ_T0079023.1 MGP_129S1SvImJ_G0031067.1 mouse_genomes_project 6 97109738 97109837 + MGP_129S1SvImJ_P0079023 Gm10234 protein_coding protein_coding MGP_129S1SvImJ_T0004962.1 MGP_129S1SvImJ_G0004262.1 mouse_genomes_project 6 40843825 40867447 - Gm44284 antisense antisense MGP_129S1SvImJ_T0076350.1 MGP_129S1SvImJ_G0030465.1 mouse_genomes_project 6 12888180 12971501 + MGP_129S1SvImJ_P0076350 Mdfic protein_coding protein_coding MGP_129S1SvImJ_T0076351.1 MGP_129S1SvImJ_G0030465.1 mouse_genomes_project 6 12888180 12971505 + MGP_129S1SvImJ_P0076351 Mdfic protein_coding protein_coding MGP_129S1SvImJ_T0076352.1 MGP_129S1SvImJ_G0030465.1 mouse_genomes_project 6 12888222 12939884 + MGP_129S1SvImJ_P0076352 Mdfic protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076353.1 MGP_129S1SvImJ_G0030465.1 mouse_genomes_project 6 12888240 12941953 + MGP_129S1SvImJ_P0076353 Mdfic protein_coding protein_coding MGP_129S1SvImJ_T0076354.1 MGP_129S1SvImJ_G0030465.1 mouse_genomes_project 6 12888606 12970145 + MGP_129S1SvImJ_P0076354 Mdfic protein_coding protein_coding MGP_129S1SvImJ_T0076355.1 MGP_129S1SvImJ_G0030465.1 mouse_genomes_project 6 12896474 12938998 + MGP_129S1SvImJ_P0076355 Mdfic protein_coding protein_coding MGP_129S1SvImJ_T0077225.1 MGP_129S1SvImJ_G0030651.1 mouse_genomes_project 6 40923780 40924873 + MGP_129S1SvImJ_P0077225 Tas2r135 protein_coding protein_coding MGP_129S1SvImJ_T0101229.1 MGP_129S1SvImJ_G0039296.1 mouse_genomes_project 6 11212156 11212272 + Gm23760 snoRNA snoRNA MGP_129S1SvImJ_T0015647.1 MGP_129S1SvImJ_G0013736.1 mouse_genomes_project 6 136067735 136068186 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002027.1 MGP_129S1SvImJ_G0001940.1 mouse_genomes_project 6 72021738 72024955 - TEC TEC MGP_129S1SvImJ_T0076322.1 MGP_129S1SvImJ_G0030461.1 mouse_genomes_project 6 10920801 10927184 - MGP_129S1SvImJ_P0076322 Gpr85 protein_coding protein_coding MGP_129S1SvImJ_T0076323.1 MGP_129S1SvImJ_G0030461.1 mouse_genomes_project 6 10921411 10924762 - MGP_129S1SvImJ_P0076323 Gpr85 protein_coding protein_coding MGP_129S1SvImJ_T0076324.1 MGP_129S1SvImJ_G0030461.1 mouse_genomes_project 6 10921420 10923585 - MGP_129S1SvImJ_P0076324 Gpr85 protein_coding protein_coding MGP_129S1SvImJ_T0076325.1 MGP_129S1SvImJ_G0030461.1 mouse_genomes_project 6 10924417 10926737 - Gpr85 protein_coding processed_transcript MGP_129S1SvImJ_T0080549.1 MGP_129S1SvImJ_G0031403.1 mouse_genomes_project 6 138652403 138695878 + MGP_129S1SvImJ_P0080549 Bcl2l14 protein_coding protein_coding MGP_129S1SvImJ_T0080550.1 MGP_129S1SvImJ_G0031403.1 mouse_genomes_project 6 138652430 138659427 + Bcl2l14 protein_coding processed_transcript MGP_129S1SvImJ_T0080551.1 MGP_129S1SvImJ_G0031403.1 mouse_genomes_project 6 138654727 138695866 + MGP_129S1SvImJ_P0080551 Bcl2l14 protein_coding protein_coding MGP_129S1SvImJ_T0080552.1 MGP_129S1SvImJ_G0031403.1 mouse_genomes_project 6 138654739 138681092 + MGP_129S1SvImJ_P0080552 Bcl2l14 protein_coding protein_coding MGP_129S1SvImJ_T0080553.1 MGP_129S1SvImJ_G0031403.1 mouse_genomes_project 6 138670908 138695257 + MGP_129S1SvImJ_P0080553 Bcl2l14 protein_coding protein_coding MGP_129S1SvImJ_T0080554.1 MGP_129S1SvImJ_G0031403.1 mouse_genomes_project 6 138670945 138685602 + Bcl2l14 protein_coding retained_intron MGP_129S1SvImJ_T0102656.1 MGP_129S1SvImJ_G0040489.1 mouse_genomes_project 6 137062016 137062945 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015349.1 MGP_129S1SvImJ_G0013438.1 mouse_genomes_project 6 46755763 46756159 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079949.1 MGP_129S1SvImJ_G0031240.1 mouse_genomes_project 6 126248284 126274451 + MGP_129S1SvImJ_P0079949 Clec4a2 protein_coding protein_coding MGP_129S1SvImJ_T0079950.1 MGP_129S1SvImJ_G0031240.1 mouse_genomes_project 6 126273469 126278757 + MGP_129S1SvImJ_P0079950 Clec4a2 protein_coding protein_coding MGP_129S1SvImJ_T0079951.1 MGP_129S1SvImJ_G0031240.1 mouse_genomes_project 6 126273471 126292149 + MGP_129S1SvImJ_P0079951 Clec4a2 protein_coding protein_coding MGP_129S1SvImJ_T0079952.1 MGP_129S1SvImJ_G0031240.1 mouse_genomes_project 6 126274097 126293614 + MGP_129S1SvImJ_P0079952 Clec4a2 protein_coding protein_coding MGP_129S1SvImJ_T0079953.1 MGP_129S1SvImJ_G0031240.1 mouse_genomes_project 6 126274248 126292491 + MGP_129S1SvImJ_P0079953 Clec4a2 protein_coding protein_coding MGP_129S1SvImJ_T0077264.1 MGP_129S1SvImJ_G0030673.1 mouse_genomes_project 6 41799063 41800005 + MGP_129S1SvImJ_P0077264 Olfr435 protein_coding protein_coding MGP_129S1SvImJ_T0102639.1 MGP_129S1SvImJ_G0040472.1 mouse_genomes_project 6 127181345 127187892 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0080505.1 MGP_129S1SvImJ_G0031369.1 mouse_genomes_project 6 135447994 135453393 + MGP_129S1SvImJ_P0080505 protein_coding protein_coding MGP_129S1SvImJ_T0101949.1 MGP_129S1SvImJ_G0039835.1 mouse_genomes_project 6 127205880 127226333 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0078767.1 MGP_129S1SvImJ_G0031014.1 mouse_genomes_project 6 90249826 90255813 - MGP_129S1SvImJ_P0078767 Abtb1 protein_coding protein_coding MGP_129S1SvImJ_T0078768.1 MGP_129S1SvImJ_G0031014.1 mouse_genomes_project 6 90249836 90255807 - MGP_129S1SvImJ_P0078768 Abtb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078769.1 MGP_129S1SvImJ_G0031014.1 mouse_genomes_project 6 90250060 90255897 - MGP_129S1SvImJ_P0078769 Abtb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078770.1 MGP_129S1SvImJ_G0031014.1 mouse_genomes_project 6 90250190 90252628 - Abtb1 protein_coding retained_intron MGP_129S1SvImJ_T0078771.1 MGP_129S1SvImJ_G0031014.1 mouse_genomes_project 6 90250335 90252779 - MGP_129S1SvImJ_P0078771 Abtb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078772.1 MGP_129S1SvImJ_G0031014.1 mouse_genomes_project 6 90250597 90252993 - MGP_129S1SvImJ_P0078772 Abtb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078773.1 MGP_129S1SvImJ_G0031014.1 mouse_genomes_project 6 90252027 90253068 - MGP_129S1SvImJ_P0078773 Abtb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078774.1 MGP_129S1SvImJ_G0031014.1 mouse_genomes_project 6 90252366 90255779 - MGP_129S1SvImJ_P0078774 Abtb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078775.1 MGP_129S1SvImJ_G0031014.1 mouse_genomes_project 6 90252569 90253502 - Abtb1 protein_coding retained_intron MGP_129S1SvImJ_T0078776.1 MGP_129S1SvImJ_G0031014.1 mouse_genomes_project 6 90252757 90255795 - MGP_129S1SvImJ_P0078776 Abtb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078777.1 MGP_129S1SvImJ_G0031014.1 mouse_genomes_project 6 90252930 90255743 - Abtb1 protein_coding retained_intron MGP_129S1SvImJ_T0078778.1 MGP_129S1SvImJ_G0031014.1 mouse_genomes_project 6 90253577 90255848 - MGP_129S1SvImJ_P0078778 Abtb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076178.1 MGP_129S1SvImJ_G0030430.1 mouse_genomes_project 6 1521711 1536241 + MGP_129S1SvImJ_P0076178 protein_coding protein_coding MGP_129S1SvImJ_T0076179.1 MGP_129S1SvImJ_G0030430.1 mouse_genomes_project 6 1521711 1536244 + MGP_129S1SvImJ_P0076179 protein_coding protein_coding MGP_129S1SvImJ_T0076180.1 MGP_129S1SvImJ_G0030430.1 mouse_genomes_project 6 1521811 1536244 + MGP_129S1SvImJ_P0076180 protein_coding protein_coding MGP_129S1SvImJ_T0005144.1 MGP_129S1SvImJ_G0004391.1 mouse_genomes_project 6 150013885 150016762 + Gm26666 antisense antisense MGP_129S1SvImJ_T0008557.1 MGP_129S1SvImJ_G0006927.1 mouse_genomes_project 6 29542159 29700806 + Gm43154 lincRNA lincRNA MGP_129S1SvImJ_T0008558.1 MGP_129S1SvImJ_G0006927.1 mouse_genomes_project 6 29542237 29701069 + Gm43154 lincRNA lincRNA MGP_129S1SvImJ_T0008561.1 MGP_129S1SvImJ_G0006927.1 mouse_genomes_project 6 29615256 29701071 + Gm43154 lincRNA lincRNA MGP_129S1SvImJ_T0077256.1 MGP_129S1SvImJ_G0030667.1 mouse_genomes_project 6 41469967 41470898 + MGP_129S1SvImJ_P0077256 protein_coding protein_coding MGP_129S1SvImJ_T0077473.1 MGP_129S1SvImJ_G0030723.1 mouse_genomes_project 6 48330823 48354849 + MGP_129S1SvImJ_P0077473 Ccdc126 protein_coding protein_coding MGP_129S1SvImJ_T0077474.1 MGP_129S1SvImJ_G0030723.1 mouse_genomes_project 6 48330856 48354845 + MGP_129S1SvImJ_P0077474 Ccdc126 protein_coding protein_coding MGP_129S1SvImJ_T0008562.1 MGP_129S1SvImJ_G0006930.1 mouse_genomes_project 6 29657109 29662882 - Gm43293 lincRNA lincRNA MGP_129S1SvImJ_T0102606.1 MGP_129S1SvImJ_G0040439.1 mouse_genomes_project 6 41695687 41696003 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015617.1 MGP_129S1SvImJ_G0013706.1 mouse_genomes_project 6 130651180 130651700 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015279.1 MGP_129S1SvImJ_G0013368.1 mouse_genomes_project 6 11186184 11186489 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078631.1 MGP_129S1SvImJ_G0030986.1 mouse_genomes_project 6 88380684 88429728 + MGP_129S1SvImJ_P0078631 Gfpt1 protein_coding protein_coding MGP_129S1SvImJ_T0078632.1 MGP_129S1SvImJ_G0030986.1 mouse_genomes_project 6 88380684 88393302 + MGP_129S1SvImJ_P0078632 Gfpt1 protein_coding protein_coding MGP_129S1SvImJ_T0078633.1 MGP_129S1SvImJ_G0030986.1 mouse_genomes_project 6 88380688 88391826 + Gfpt1 protein_coding processed_transcript MGP_129S1SvImJ_T0078634.1 MGP_129S1SvImJ_G0030986.1 mouse_genomes_project 6 88380688 88383497 + Gfpt1 protein_coding retained_intron MGP_129S1SvImJ_T0078635.1 MGP_129S1SvImJ_G0030986.1 mouse_genomes_project 6 88380688 88393302 + MGP_129S1SvImJ_P0078635 Gfpt1 protein_coding protein_coding MGP_129S1SvImJ_T0078636.1 MGP_129S1SvImJ_G0030986.1 mouse_genomes_project 6 88380729 88425775 + MGP_129S1SvImJ_P0078636 Gfpt1 protein_coding protein_coding MGP_129S1SvImJ_T0078637.1 MGP_129S1SvImJ_G0030986.1 mouse_genomes_project 6 88414338 88423889 + Gfpt1 protein_coding retained_intron MGP_129S1SvImJ_T0080679.1 MGP_129S1SvImJ_G0031433.1 mouse_genomes_project 6 141437652 141482481 + MGP_129S1SvImJ_P0080679 Pde6h protein_coding protein_coding MGP_129S1SvImJ_T0080683.1 MGP_129S1SvImJ_G0031433.1 mouse_genomes_project 6 141473768 141487822 + MGP_129S1SvImJ_P0080683 Pde6h protein_coding protein_coding MGP_129S1SvImJ_T0080684.1 MGP_129S1SvImJ_G0031433.1 mouse_genomes_project 6 141473778 141482726 + Pde6h protein_coding retained_intron MGP_129S1SvImJ_T0080685.1 MGP_129S1SvImJ_G0031433.1 mouse_genomes_project 6 141478536 141482512 + MGP_129S1SvImJ_P0080685 Pde6h protein_coding protein_coding MGP_129S1SvImJ_T0008643.1 MGP_129S1SvImJ_G0006990.1 mouse_genomes_project 6 73567107 73571118 + Gm26640 lincRNA lincRNA MGP_129S1SvImJ_T0077576.1 MGP_129S1SvImJ_G0030749.1 mouse_genomes_project 6 51483274 51487844 - MGP_129S1SvImJ_P0077576 Hoxa11 protein_coding protein_coding MGP_129S1SvImJ_T0077577.1 MGP_129S1SvImJ_G0030749.1 mouse_genomes_project 6 51483278 51487829 - Hoxa11 protein_coding processed_transcript MGP_129S1SvImJ_T0005075.1 MGP_129S1SvImJ_G0004333.1 mouse_genomes_project 6 113004112 113010290 - Gm20387 antisense antisense MGP_129S1SvImJ_T0000189.1 MGP_129S1SvImJ_G0000144.1 mouse_genomes_project 6 69849355 69849848 - MGP_129S1SvImJ_P0000189 Igkv4-61 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0079911.1 MGP_129S1SvImJ_G0031228.1 mouse_genomes_project 6 125646533 125658948 + MGP_129S1SvImJ_P0079911 Aicda protein_coding protein_coding MGP_129S1SvImJ_T0079912.1 MGP_129S1SvImJ_G0031228.1 mouse_genomes_project 6 125655239 125657844 + MGP_129S1SvImJ_P0079912 Aicda protein_coding protein_coding MGP_129S1SvImJ_T0015355.1 MGP_129S1SvImJ_G0013444.1 mouse_genomes_project 6 47939404 47939888 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002703.1 MGP_129S1SvImJ_G0002584.1 mouse_genomes_project 6 39601472 39601909 + MGP_129S1SvImJ_P0002703 Trbv13-2 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0079161.1 MGP_129S1SvImJ_G0031095.1 mouse_genomes_project 6 109005378 109013942 + MGP_129S1SvImJ_P0079161 Trnt1 protein_coding protein_coding MGP_129S1SvImJ_T0079162.1 MGP_129S1SvImJ_G0031095.1 mouse_genomes_project 6 109005399 109018124 + MGP_129S1SvImJ_P0079162 Trnt1 protein_coding protein_coding MGP_129S1SvImJ_T0079163.1 MGP_129S1SvImJ_G0031095.1 mouse_genomes_project 6 109005424 109018727 + MGP_129S1SvImJ_P0079163 Trnt1 protein_coding protein_coding MGP_129S1SvImJ_T0079164.1 MGP_129S1SvImJ_G0031095.1 mouse_genomes_project 6 109005424 109017907 + MGP_129S1SvImJ_P0079164 Trnt1 protein_coding protein_coding MGP_129S1SvImJ_T0079165.1 MGP_129S1SvImJ_G0031095.1 mouse_genomes_project 6 109005428 109006423 + Trnt1 protein_coding retained_intron MGP_129S1SvImJ_T0079166.1 MGP_129S1SvImJ_G0031095.1 mouse_genomes_project 6 109005471 109009314 + Trnt1 protein_coding processed_transcript MGP_129S1SvImJ_T0079167.1 MGP_129S1SvImJ_G0031095.1 mouse_genomes_project 6 109005544 109009610 + MGP_129S1SvImJ_P0079167 Trnt1 protein_coding protein_coding MGP_129S1SvImJ_T0079168.1 MGP_129S1SvImJ_G0031095.1 mouse_genomes_project 6 109005765 109010724 + MGP_129S1SvImJ_P0079168 Trnt1 protein_coding protein_coding MGP_129S1SvImJ_T0076899.1 MGP_129S1SvImJ_G0030563.1 mouse_genomes_project 6 32969246 32981602 + Tmem140 protein_coding processed_transcript MGP_129S1SvImJ_T0076900.1 MGP_129S1SvImJ_G0030563.1 mouse_genomes_project 6 32969246 32984961 + MGP_129S1SvImJ_P0076900 Tmem140 protein_coding protein_coding MGP_129S1SvImJ_T0076901.1 MGP_129S1SvImJ_G0030563.1 mouse_genomes_project 6 32969362 32982628 + MGP_129S1SvImJ_P0076901 Tmem140 protein_coding protein_coding MGP_129S1SvImJ_T0076902.1 MGP_129S1SvImJ_G0030563.1 mouse_genomes_project 6 32976311 32978840 + Tmem140 protein_coding processed_transcript MGP_129S1SvImJ_T0076903.1 MGP_129S1SvImJ_G0030563.1 mouse_genomes_project 6 32976343 32982753 + MGP_129S1SvImJ_P0076903 Tmem140 protein_coding protein_coding MGP_129S1SvImJ_T0076906.1 MGP_129S1SvImJ_G0030563.1 mouse_genomes_project 6 32982728 32983570 + Tmem140 protein_coding processed_transcript MGP_129S1SvImJ_T0011694.1 MGP_129S1SvImJ_G0009810.1 mouse_genomes_project 6 146774409 146774658 - Gm23775 misc_RNA misc_RNA MGP_129S1SvImJ_T0018329.1 MGP_129S1SvImJ_G0015643.1 mouse_genomes_project 6 97045272 97121674 - AY512915 processed_transcript antisense MGP_129S1SvImJ_T0018330.1 MGP_129S1SvImJ_G0015643.1 mouse_genomes_project 6 97066174 97121661 - AY512915 processed_transcript antisense MGP_129S1SvImJ_T0018331.1 MGP_129S1SvImJ_G0015643.1 mouse_genomes_project 6 97080055 97121676 - AY512915 processed_transcript lincRNA MGP_129S1SvImJ_T0018332.1 MGP_129S1SvImJ_G0015643.1 mouse_genomes_project 6 97100861 97121654 - AY512915 processed_transcript antisense MGP_129S1SvImJ_T0018333.1 MGP_129S1SvImJ_G0015643.1 mouse_genomes_project 6 97115059 97121660 - AY512915 processed_transcript processed_transcript MGP_129S1SvImJ_T0080190.1 MGP_129S1SvImJ_G0031288.1 mouse_genomes_project 6 128493115 128497801 - Gapdh protein_coding retained_intron MGP_129S1SvImJ_T0080191.1 MGP_129S1SvImJ_G0031288.1 mouse_genomes_project 6 128493253 128493872 - Gapdh protein_coding retained_intron MGP_129S1SvImJ_T0080192.1 MGP_129S1SvImJ_G0031288.1 mouse_genomes_project 6 128493254 128498571 - MGP_129S1SvImJ_P0080192 Gapdh protein_coding protein_coding MGP_129S1SvImJ_T0080193.1 MGP_129S1SvImJ_G0031288.1 mouse_genomes_project 6 128496143 128498401 - Gapdh protein_coding processed_transcript MGP_129S1SvImJ_T0080194.1 MGP_129S1SvImJ_G0031288.1 mouse_genomes_project 6 128497394 128498403 - Gapdh protein_coding retained_intron MGP_129S1SvImJ_T0002145.1 MGP_129S1SvImJ_G0002058.1 mouse_genomes_project 6 116264881 116265576 + TEC TEC MGP_129S1SvImJ_T0015524.1 MGP_129S1SvImJ_G0013613.1 mouse_genomes_project 6 99290657 99292394 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011641.1 MGP_129S1SvImJ_G0009757.1 mouse_genomes_project 6 5372012 5372325 + Gm24059 misc_RNA misc_RNA MGP_129S1SvImJ_T0100007.1 MGP_129S1SvImJ_G0038074.1 mouse_genomes_project 6 79718022 79718186 + Gm23727 snRNA snRNA MGP_129S1SvImJ_T0100026.1 MGP_129S1SvImJ_G0038093.1 mouse_genomes_project 6 128045854 128045916 - Rnu7 snRNA snRNA MGP_129S1SvImJ_T0008672.1 MGP_129S1SvImJ_G0007013.1 mouse_genomes_project 6 89573489 89575774 - Gm44246 lincRNA lincRNA MGP_129S1SvImJ_T0100025.1 MGP_129S1SvImJ_G0038092.1 mouse_genomes_project 6 126342150 126342232 - Gm22946 snRNA snRNA MGP_129S1SvImJ_T0077676.1 MGP_129S1SvImJ_G0030769.1 mouse_genomes_project 6 54489029 54532281 - MGP_129S1SvImJ_P0077676 Crhr2 protein_coding protein_coding MGP_129S1SvImJ_T0077677.1 MGP_129S1SvImJ_G0030769.1 mouse_genomes_project 6 54489359 54516753 - MGP_129S1SvImJ_P0077677 Crhr2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0077678.1 MGP_129S1SvImJ_G0030769.1 mouse_genomes_project 6 54490165 54516967 - MGP_129S1SvImJ_P0077678 Crhr2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077679.1 MGP_129S1SvImJ_G0030769.1 mouse_genomes_project 6 54490192 54516895 - MGP_129S1SvImJ_P0077679 Crhr2 protein_coding protein_coding MGP_129S1SvImJ_T0077680.1 MGP_129S1SvImJ_G0030769.1 mouse_genomes_project 6 54490999 54532108 - MGP_129S1SvImJ_P0077680 Crhr2 protein_coding protein_coding MGP_129S1SvImJ_T0077681.1 MGP_129S1SvImJ_G0030769.1 mouse_genomes_project 6 54491937 54499548 - Crhr2 protein_coding retained_intron MGP_129S1SvImJ_T0077682.1 MGP_129S1SvImJ_G0030769.1 mouse_genomes_project 6 54497601 54532283 - Crhr2 protein_coding retained_intron MGP_129S1SvImJ_T0077683.1 MGP_129S1SvImJ_G0030769.1 mouse_genomes_project 6 54503724 54516753 - Crhr2 protein_coding retained_intron MGP_129S1SvImJ_T0011684.1 MGP_129S1SvImJ_G0009800.1 mouse_genomes_project 6 114032159 114032455 + Gm24005 misc_RNA misc_RNA MGP_129S1SvImJ_T0099992.1 MGP_129S1SvImJ_G0038059.1 mouse_genomes_project 6 36393607 36393711 + Gm23231 snRNA snRNA MGP_129S1SvImJ_T0002124.1 MGP_129S1SvImJ_G0002037.1 mouse_genomes_project 6 102985461 102986068 - TEC TEC MGP_129S1SvImJ_T0005047.1 MGP_129S1SvImJ_G0004315.1 mouse_genomes_project 6 89843426 89844245 + Gm44264 antisense antisense MGP_129S1SvImJ_T0011663.1 MGP_129S1SvImJ_G0009779.1 mouse_genomes_project 6 51397542 51397685 + Gm27477 misc_RNA misc_RNA MGP_129S1SvImJ_T0076441.1 MGP_129S1SvImJ_G0030479.1 mouse_genomes_project 6 18646520 19192891 + MGP_129S1SvImJ_P0076441 Kcnd2 protein_coding protein_coding MGP_129S1SvImJ_T0078162.1 MGP_129S1SvImJ_G0030896.1 mouse_genomes_project 6 79220277 79223227 + MGP_129S1SvImJ_P0078162 Reg2 protein_coding protein_coding MGP_129S1SvImJ_T0002060.1 MGP_129S1SvImJ_G0001973.1 mouse_genomes_project 6 83273319 83277471 - TEC TEC MGP_129S1SvImJ_T0015629.1 MGP_129S1SvImJ_G0013718.1 mouse_genomes_project 6 132281874 132282364 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076964.1 MGP_129S1SvImJ_G0030578.1 mouse_genomes_project 6 36134942 36185654 + Trim24 protein_coding retained_intron MGP_129S1SvImJ_T0076965.1 MGP_129S1SvImJ_G0030578.1 mouse_genomes_project 6 36134942 36213824 + Trim24 protein_coding retained_intron MGP_129S1SvImJ_T0076966.1 MGP_129S1SvImJ_G0030578.1 mouse_genomes_project 6 36134942 36236069 + MGP_129S1SvImJ_P0076966 Trim24 protein_coding protein_coding MGP_129S1SvImJ_T0076967.1 MGP_129S1SvImJ_G0030578.1 mouse_genomes_project 6 36134942 36236069 + MGP_129S1SvImJ_P0076967 Trim24 protein_coding protein_coding MGP_129S1SvImJ_T0076968.1 MGP_129S1SvImJ_G0030578.1 mouse_genomes_project 6 36140461 36196633 + Trim24 protein_coding processed_transcript MGP_129S1SvImJ_T0076969.1 MGP_129S1SvImJ_G0030578.1 mouse_genomes_project 6 36164801 36235705 + MGP_129S1SvImJ_P0076969 Trim24 protein_coding protein_coding MGP_129S1SvImJ_T0076970.1 MGP_129S1SvImJ_G0030578.1 mouse_genomes_project 6 36179535 36192120 + Trim24 protein_coding retained_intron MGP_129S1SvImJ_T0076971.1 MGP_129S1SvImJ_G0030578.1 mouse_genomes_project 6 36215583 36222750 + Trim24 protein_coding retained_intron MGP_129S1SvImJ_T0076799.1 MGP_129S1SvImJ_G0030546.1 mouse_genomes_project 6 28794872 28801336 - Tsga13 protein_coding processed_transcript MGP_129S1SvImJ_T0076800.1 MGP_129S1SvImJ_G0030546.1 mouse_genomes_project 6 28794872 28816202 - MGP_129S1SvImJ_P0076800 Tsga13 protein_coding protein_coding MGP_129S1SvImJ_T0076801.1 MGP_129S1SvImJ_G0030546.1 mouse_genomes_project 6 28795106 28798369 - Tsga13 protein_coding retained_intron MGP_129S1SvImJ_T0081058.1 MGP_129S1SvImJ_G0031499.1 mouse_genomes_project 6 152308089 152321186 - MGP_129S1SvImJ_P0081058 Pthlh protein_coding protein_coding MGP_129S1SvImJ_T0081059.1 MGP_129S1SvImJ_G0031499.1 mouse_genomes_project 6 152308097 152321202 - MGP_129S1SvImJ_P0081059 Pthlh protein_coding protein_coding MGP_129S1SvImJ_T0079142.1 MGP_129S1SvImJ_G0031092.1 mouse_genomes_project 6 106650279 106809159 + MGP_129S1SvImJ_P0079142 Cntn6 protein_coding protein_coding MGP_129S1SvImJ_T0079143.1 MGP_129S1SvImJ_G0031092.1 mouse_genomes_project 6 106650543 106735062 + Cntn6 protein_coding retained_intron MGP_129S1SvImJ_T0079144.1 MGP_129S1SvImJ_G0031092.1 mouse_genomes_project 6 106727639 107035364 + MGP_129S1SvImJ_P0079144 Cntn6 protein_coding protein_coding MGP_129S1SvImJ_T0015413.1 MGP_129S1SvImJ_G0013502.1 mouse_genomes_project 6 65691503 65691890 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080515.1 MGP_129S1SvImJ_G0031379.1 mouse_genomes_project 6 136533639 136541521 - MGP_129S1SvImJ_P0080515 Gm8882 protein_coding protein_coding MGP_129S1SvImJ_T0015371.1 MGP_129S1SvImJ_G0013460.1 mouse_genomes_project 6 51361606 51361875 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015276.1 MGP_129S1SvImJ_G0013365.1 mouse_genomes_project 6 10530917 10531413 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078443.1 MGP_129S1SvImJ_G0030949.1 mouse_genomes_project 6 86328413 86345151 + MGP_129S1SvImJ_P0078443 Emx1 protein_coding protein_coding MGP_129S1SvImJ_T0078444.1 MGP_129S1SvImJ_G0030949.1 mouse_genomes_project 6 86334369 86345255 + Emx1 protein_coding retained_intron MGP_129S1SvImJ_T0010818.1 MGP_129S1SvImJ_G0008934.1 mouse_genomes_project 6 118421277 118421340 + Mir7660 miRNA miRNA MGP_129S1SvImJ_T0005125.1 MGP_129S1SvImJ_G0004375.1 mouse_genomes_project 6 139194875 139197974 + 2810454H06Rik antisense antisense MGP_129S1SvImJ_T0078983.1 MGP_129S1SvImJ_G0031059.1 mouse_genomes_project 6 94016003 94368671 - MGP_129S1SvImJ_P0078983 Prickle2 protein_coding protein_coding MGP_129S1SvImJ_T0078984.1 MGP_129S1SvImJ_G0031059.1 mouse_genomes_project 6 94016003 94222871 - MGP_129S1SvImJ_P0078984 Prickle2 protein_coding protein_coding MGP_129S1SvImJ_T0078985.1 MGP_129S1SvImJ_G0031059.1 mouse_genomes_project 6 94016005 94189541 - MGP_129S1SvImJ_P0078985 Prickle2 protein_coding protein_coding MGP_129S1SvImJ_T0078986.1 MGP_129S1SvImJ_G0031059.1 mouse_genomes_project 6 94020469 94136670 - MGP_129S1SvImJ_P0078986 Prickle2 protein_coding protein_coding MGP_129S1SvImJ_T0015354.1 MGP_129S1SvImJ_G0013443.1 mouse_genomes_project 6 47917766 47918096 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077561.1 MGP_129S1SvImJ_G0030745.1 mouse_genomes_project 6 51446085 51449879 - MGP_129S1SvImJ_P0077561 Hoxa6 protein_coding protein_coding MGP_129S1SvImJ_T0004937.1 MGP_129S1SvImJ_G0004240.1 mouse_genomes_project 6 27110650 27111061 - Gm17172 antisense antisense MGP_129S1SvImJ_T0079408.1 MGP_129S1SvImJ_G0031140.1 mouse_genomes_project 6 116848559 116883065 + MGP_129S1SvImJ_P0079408 Slc6a1 protein_coding protein_coding MGP_129S1SvImJ_T0079409.1 MGP_129S1SvImJ_G0031140.1 mouse_genomes_project 6 116848622 116872862 + Slc6a1 protein_coding retained_intron MGP_129S1SvImJ_T0079410.1 MGP_129S1SvImJ_G0031140.1 mouse_genomes_project 6 116848622 116878188 + Slc6a1 protein_coding retained_intron MGP_129S1SvImJ_T0079411.1 MGP_129S1SvImJ_G0031140.1 mouse_genomes_project 6 116865773 116867702 + Slc6a1 protein_coding processed_transcript MGP_129S1SvImJ_T0079412.1 MGP_129S1SvImJ_G0031140.1 mouse_genomes_project 6 116866994 116867702 + Slc6a1 protein_coding retained_intron MGP_129S1SvImJ_T0079413.1 MGP_129S1SvImJ_G0031140.1 mouse_genomes_project 6 116878944 116881268 + Slc6a1 protein_coding retained_intron MGP_129S1SvImJ_T0079533.1 MGP_129S1SvImJ_G0031162.1 mouse_genomes_project 6 118669393 118849868 - MGP_129S1SvImJ_P0079533 Tmcc1 protein_coding protein_coding MGP_129S1SvImJ_T0079534.1 MGP_129S1SvImJ_G0031162.1 mouse_genomes_project 6 118671952 118761778 - MGP_129S1SvImJ_P0079534 Tmcc1 protein_coding protein_coding MGP_129S1SvImJ_T0079535.1 MGP_129S1SvImJ_G0031162.1 mouse_genomes_project 6 118672122 118790270 - MGP_129S1SvImJ_P0079535 Tmcc1 protein_coding protein_coding MGP_129S1SvImJ_T0079536.1 MGP_129S1SvImJ_G0031162.1 mouse_genomes_project 6 118672125 118708394 - MGP_129S1SvImJ_P0079536 Tmcc1 protein_coding protein_coding MGP_129S1SvImJ_T0079537.1 MGP_129S1SvImJ_G0031162.1 mouse_genomes_project 6 118672396 118790380 - MGP_129S1SvImJ_P0079537 Tmcc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079538.1 MGP_129S1SvImJ_G0031162.1 mouse_genomes_project 6 118672490 118708338 - MGP_129S1SvImJ_P0079538 Tmcc1 protein_coding protein_coding MGP_129S1SvImJ_T0079539.1 MGP_129S1SvImJ_G0031162.1 mouse_genomes_project 6 118672778 118725088 - MGP_129S1SvImJ_P0079539 Tmcc1 protein_coding protein_coding MGP_129S1SvImJ_T0079540.1 MGP_129S1SvImJ_G0031162.1 mouse_genomes_project 6 118695351 118789853 - MGP_129S1SvImJ_P0079540 Tmcc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079541.1 MGP_129S1SvImJ_G0031162.1 mouse_genomes_project 6 118704846 118709440 - Tmcc1 protein_coding retained_intron MGP_129S1SvImJ_T0079542.1 MGP_129S1SvImJ_G0031162.1 mouse_genomes_project 6 118758829 118764309 - Tmcc1 protein_coding retained_intron MGP_129S1SvImJ_T0079543.1 MGP_129S1SvImJ_G0031162.1 mouse_genomes_project 6 118787623 118828257 - MGP_129S1SvImJ_P0079543 Tmcc1 protein_coding protein_coding MGP_129S1SvImJ_T0079544.1 MGP_129S1SvImJ_G0031162.1 mouse_genomes_project 6 118789469 118791073 - Tmcc1 protein_coding retained_intron MGP_129S1SvImJ_T0015649.1 MGP_129S1SvImJ_G0013738.1 mouse_genomes_project 6 136572051 136572484 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079595.1 MGP_129S1SvImJ_G0031174.1 mouse_genomes_project 6 119319426 119368302 - MGP_129S1SvImJ_P0079595 Rassf4 protein_coding protein_coding MGP_129S1SvImJ_T0079596.1 MGP_129S1SvImJ_G0031174.1 mouse_genomes_project 6 119324656 119335978 - MGP_129S1SvImJ_P0079596 Rassf4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0079597.1 MGP_129S1SvImJ_G0031174.1 mouse_genomes_project 6 119325642 119368159 - MGP_129S1SvImJ_P0079597 Rassf4 protein_coding protein_coding MGP_129S1SvImJ_T0079598.1 MGP_129S1SvImJ_G0031174.1 mouse_genomes_project 6 119325906 119327417 - Rassf4 protein_coding processed_transcript MGP_129S1SvImJ_T0079599.1 MGP_129S1SvImJ_G0031174.1 mouse_genomes_project 6 119329339 119368139 - Rassf4 protein_coding retained_intron MGP_129S1SvImJ_T0079600.1 MGP_129S1SvImJ_G0031174.1 mouse_genomes_project 6 119331652 119334347 - Rassf4 protein_coding retained_intron MGP_129S1SvImJ_T0079601.1 MGP_129S1SvImJ_G0031174.1 mouse_genomes_project 6 119332317 119368121 - MGP_129S1SvImJ_P0079601 Rassf4 protein_coding protein_coding MGP_129S1SvImJ_T0079602.1 MGP_129S1SvImJ_G0031174.1 mouse_genomes_project 6 119332388 119368148 - MGP_129S1SvImJ_P0079602 Rassf4 protein_coding protein_coding MGP_129S1SvImJ_T0076197.1 MGP_129S1SvImJ_G0030433.1 mouse_genomes_project 6 2055474 2097840 - MGP_129S1SvImJ_P0076197 Pon3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076198.1 MGP_129S1SvImJ_G0030433.1 mouse_genomes_project 6 2055474 2097893 - MGP_129S1SvImJ_P0076198 Pon3 protein_coding protein_coding MGP_129S1SvImJ_T0076199.1 MGP_129S1SvImJ_G0030433.1 mouse_genomes_project 6 2071314 2097842 - MGP_129S1SvImJ_P0076199 Pon3 protein_coding protein_coding MGP_129S1SvImJ_T0076200.1 MGP_129S1SvImJ_G0030433.1 mouse_genomes_project 6 2075260 2097821 - Pon3 protein_coding retained_intron MGP_129S1SvImJ_T0076201.1 MGP_129S1SvImJ_G0030433.1 mouse_genomes_project 6 2075703 2096473 - Pon3 protein_coding retained_intron MGP_129S1SvImJ_T0076202.1 MGP_129S1SvImJ_G0030433.1 mouse_genomes_project 6 2096186 2097174 - Pon3 protein_coding processed_transcript MGP_129S1SvImJ_T0077782.1 MGP_129S1SvImJ_G0030807.1 mouse_genomes_project 6 57425170 57426079 - MGP_129S1SvImJ_P0077782 protein_coding protein_coding MGP_129S1SvImJ_T0079523.1 MGP_129S1SvImJ_G0031160.1 mouse_genomes_project 6 118591969 118597230 + MGP_129S1SvImJ_P0079523 H1foo protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079524.1 MGP_129S1SvImJ_G0031160.1 mouse_genomes_project 6 118591969 118597235 + MGP_129S1SvImJ_P0079524 H1foo protein_coding protein_coding MGP_129S1SvImJ_T0079525.1 MGP_129S1SvImJ_G0031160.1 mouse_genomes_project 6 118591969 118597230 + MGP_129S1SvImJ_P0079525 H1foo protein_coding protein_coding MGP_129S1SvImJ_T0079526.1 MGP_129S1SvImJ_G0031160.1 mouse_genomes_project 6 118591984 118596920 + MGP_129S1SvImJ_P0079526 H1foo protein_coding protein_coding MGP_129S1SvImJ_T0079527.1 MGP_129S1SvImJ_G0031160.1 mouse_genomes_project 6 118595755 118597224 + MGP_129S1SvImJ_P0079527 H1foo protein_coding protein_coding MGP_129S1SvImJ_T0015335.1 MGP_129S1SvImJ_G0013424.1 mouse_genomes_project 6 41257930 41258362 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002036.1 MGP_129S1SvImJ_G0001949.1 mouse_genomes_project 6 73229787 73231068 + TEC TEC MGP_129S1SvImJ_T0005054.1 MGP_129S1SvImJ_G0004321.1 mouse_genomes_project 6 92242823 92243922 + Gm44123 antisense antisense MGP_129S1SvImJ_T0080555.1 MGP_129S1SvImJ_G0031404.1 mouse_genomes_project 6 138703553 138829915 - MGP_129S1SvImJ_P0080555 Lrp6 protein_coding protein_coding MGP_129S1SvImJ_T0080556.1 MGP_129S1SvImJ_G0031404.1 mouse_genomes_project 6 138707560 138728291 - Lrp6 protein_coding retained_intron MGP_129S1SvImJ_T0080557.1 MGP_129S1SvImJ_G0031404.1 mouse_genomes_project 6 138718840 138722006 - Lrp6 protein_coding retained_intron MGP_129S1SvImJ_T0080558.1 MGP_129S1SvImJ_G0031404.1 mouse_genomes_project 6 138719475 138724759 - Lrp6 protein_coding retained_intron MGP_129S1SvImJ_T0080559.1 MGP_129S1SvImJ_G0031404.1 mouse_genomes_project 6 138769673 138829967 - MGP_129S1SvImJ_P0080559 Lrp6 protein_coding protein_coding MGP_129S1SvImJ_T0080560.1 MGP_129S1SvImJ_G0031404.1 mouse_genomes_project 6 138800924 138801865 - Lrp6 protein_coding retained_intron MGP_129S1SvImJ_T0005133.1 MGP_129S1SvImJ_G0004381.1 mouse_genomes_project 6 143029721 143050569 + Gm30332 antisense antisense MGP_129S1SvImJ_T0080511.1 MGP_129S1SvImJ_G0031375.1 mouse_genomes_project 6 135645909 135646873 - MGP_129S1SvImJ_P0080511 Tas2r105 protein_coding protein_coding MGP_129S1SvImJ_T0015340.1 MGP_129S1SvImJ_G0013429.1 mouse_genomes_project 6 43330326 43330471 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001986.1 MGP_129S1SvImJ_G0001899.1 mouse_genomes_project 6 43955711 43958509 + TEC TEC MGP_129S1SvImJ_T0101253.1 MGP_129S1SvImJ_G0039320.1 mouse_genomes_project 6 67902333 67902471 - Gm22425 snoRNA snoRNA MGP_129S1SvImJ_T0015545.1 MGP_129S1SvImJ_G0013634.1 mouse_genomes_project 6 109566284 109566510 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002126.1 MGP_129S1SvImJ_G0002039.1 mouse_genomes_project 6 103372511 103375196 - TEC TEC MGP_129S1SvImJ_T0079985.1 MGP_129S1SvImJ_G0031256.1 mouse_genomes_project 6 127651875 127670109 - MGP_129S1SvImJ_P0079985 Pex5 protein_coding protein_coding MGP_129S1SvImJ_T0079986.1 MGP_129S1SvImJ_G0031256.1 mouse_genomes_project 6 127651876 127669475 - MGP_129S1SvImJ_P0079986 Pex5 protein_coding protein_coding MGP_129S1SvImJ_T0079987.1 MGP_129S1SvImJ_G0031256.1 mouse_genomes_project 6 127651876 127670109 - MGP_129S1SvImJ_P0079987 Pex5 protein_coding protein_coding MGP_129S1SvImJ_T0079988.1 MGP_129S1SvImJ_G0031256.1 mouse_genomes_project 6 127651876 127669905 - MGP_129S1SvImJ_P0079988 Pex5 protein_coding protein_coding MGP_129S1SvImJ_T0079989.1 MGP_129S1SvImJ_G0031256.1 mouse_genomes_project 6 127651891 127670079 - MGP_129S1SvImJ_P0079989 Pex5 protein_coding protein_coding MGP_129S1SvImJ_T0079990.1 MGP_129S1SvImJ_G0031256.1 mouse_genomes_project 6 127652970 127654650 - Pex5 protein_coding retained_intron MGP_129S1SvImJ_T0079991.1 MGP_129S1SvImJ_G0031256.1 mouse_genomes_project 6 127658165 127669084 - Pex5 protein_coding processed_transcript MGP_129S1SvImJ_T0079992.1 MGP_129S1SvImJ_G0031256.1 mouse_genomes_project 6 127659348 127660403 - Pex5 protein_coding retained_intron MGP_129S1SvImJ_T0015626.1 MGP_129S1SvImJ_G0013715.1 mouse_genomes_project 6 132154880 132155286 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079979.1 MGP_129S1SvImJ_G0031253.1 mouse_genomes_project 6 127459805 127501254 - MGP_129S1SvImJ_P0079979 Vmn2r27 protein_coding protein_coding MGP_129S1SvImJ_T0000331.1 MGP_129S1SvImJ_G0000273.1 mouse_genomes_project 6 69630407 69630940 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0018259.1 MGP_129S1SvImJ_G0015624.1 mouse_genomes_project 6 5427071 5449559 - A430035B10Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018260.1 MGP_129S1SvImJ_G0015624.1 mouse_genomes_project 6 5428228 5437160 - A430035B10Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018261.1 MGP_129S1SvImJ_G0015624.1 mouse_genomes_project 6 5430397 5448231 - A430035B10Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018262.1 MGP_129S1SvImJ_G0015624.1 mouse_genomes_project 6 5431601 5448174 - A430035B10Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018263.1 MGP_129S1SvImJ_G0015624.1 mouse_genomes_project 6 5446211 5448291 - A430035B10Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0002114.1 MGP_129S1SvImJ_G0002027.1 mouse_genomes_project 6 95158874 95159357 - TEC TEC MGP_129S1SvImJ_T0078339.1 MGP_129S1SvImJ_G0030932.1 mouse_genomes_project 6 84485727 84512471 - MGP_129S1SvImJ_P0078339 Dguok protein_coding protein_coding MGP_129S1SvImJ_T0078340.1 MGP_129S1SvImJ_G0030932.1 mouse_genomes_project 6 84485729 84512425 - MGP_129S1SvImJ_P0078340 Dguok protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078341.1 MGP_129S1SvImJ_G0030932.1 mouse_genomes_project 6 84485819 84512403 - MGP_129S1SvImJ_P0078341 Dguok protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078342.1 MGP_129S1SvImJ_G0030932.1 mouse_genomes_project 6 84486375 84499203 - Dguok protein_coding processed_transcript MGP_129S1SvImJ_T0078343.1 MGP_129S1SvImJ_G0030932.1 mouse_genomes_project 6 84486723 84492547 - Dguok protein_coding processed_transcript MGP_129S1SvImJ_T0078344.1 MGP_129S1SvImJ_G0030932.1 mouse_genomes_project 6 84493515 84495958 - Dguok protein_coding retained_intron MGP_129S1SvImJ_T0078345.1 MGP_129S1SvImJ_G0030932.1 mouse_genomes_project 6 84495745 84512489 - Dguok protein_coding retained_intron MGP_129S1SvImJ_T0000328.1 MGP_129S1SvImJ_G0000270.1 mouse_genomes_project 6 69443098 69443569 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0077131.1 MGP_129S1SvImJ_G0030616.1 mouse_genomes_project 6 39077383 39114497 + MGP_129S1SvImJ_P0077131 Mgam protein_coding protein_coding MGP_129S1SvImJ_T0077132.1 MGP_129S1SvImJ_G0030616.1 mouse_genomes_project 6 39097490 39149926 + MGP_129S1SvImJ_P0077132 Mgam protein_coding unknown_likely_coding MGP_129S1SvImJ_T0077133.1 MGP_129S1SvImJ_G0030616.1 mouse_genomes_project 6 39148232 39233579 + MGP_129S1SvImJ_P0077133 Mgam protein_coding protein_coding MGP_129S1SvImJ_T0077134.1 MGP_129S1SvImJ_G0030616.1 mouse_genomes_project 6 39150947 39234250 + MGP_129S1SvImJ_P0077134 Mgam protein_coding unknown_likely_coding MGP_129S1SvImJ_T0077135.1 MGP_129S1SvImJ_G0030616.1 mouse_genomes_project 6 39213462 39234238 + Mgam protein_coding processed_transcript MGP_129S1SvImJ_T0077136.1 MGP_129S1SvImJ_G0030616.1 mouse_genomes_project 6 39213914 39215016 + Mgam protein_coding processed_transcript MGP_129S1SvImJ_T0080606.1 MGP_129S1SvImJ_G0031413.1 mouse_genomes_project 6 139388130 139413519 + MGP_129S1SvImJ_P0080606 Gprc5a protein_coding protein_coding MGP_129S1SvImJ_T0080455.1 MGP_129S1SvImJ_G0031352.1 mouse_genomes_project 6 133246780 133255738 + MGP_129S1SvImJ_P0080455 Klre1 protein_coding protein_coding MGP_129S1SvImJ_T0080456.1 MGP_129S1SvImJ_G0031352.1 mouse_genomes_project 6 133247126 133255688 + MGP_129S1SvImJ_P0080456 Klre1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080457.1 MGP_129S1SvImJ_G0031352.1 mouse_genomes_project 6 133253325 133255735 + Klre1 protein_coding retained_intron MGP_129S1SvImJ_T0008639.1 MGP_129S1SvImJ_G0006986.1 mouse_genomes_project 6 71829712 71836191 - Gm44175 lincRNA lincRNA MGP_129S1SvImJ_T0005089.1 MGP_129S1SvImJ_G0004343.1 mouse_genomes_project 6 118069846 118084189 - Gm44079 antisense antisense MGP_129S1SvImJ_T0076972.1 MGP_129S1SvImJ_G0030579.1 mouse_genomes_project 6 36249100 36315237 - MGP_129S1SvImJ_P0076972 Svopl protein_coding protein_coding MGP_129S1SvImJ_T0076973.1 MGP_129S1SvImJ_G0030579.1 mouse_genomes_project 6 36249873 36298615 - MGP_129S1SvImJ_P0076973 Svopl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076974.1 MGP_129S1SvImJ_G0030579.1 mouse_genomes_project 6 36282486 36290923 - Svopl protein_coding retained_intron MGP_129S1SvImJ_T0076975.1 MGP_129S1SvImJ_G0030579.1 mouse_genomes_project 6 36282788 36286280 - Svopl protein_coding retained_intron MGP_129S1SvImJ_T0076976.1 MGP_129S1SvImJ_G0030579.1 mouse_genomes_project 6 36282941 36315237 - Svopl protein_coding retained_intron MGP_129S1SvImJ_T0002152.1 MGP_129S1SvImJ_G0002065.1 mouse_genomes_project 6 120407882 120408221 + TEC TEC MGP_129S1SvImJ_T0015583.1 MGP_129S1SvImJ_G0013672.1 mouse_genomes_project 6 122731619 122732503 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076624.1 MGP_129S1SvImJ_G0030522.1 mouse_genomes_project 6 27188161 27191302 + Ccdc136 protein_coding processed_transcript MGP_129S1SvImJ_T0076625.1 MGP_129S1SvImJ_G0030522.1 mouse_genomes_project 6 27188482 27218891 + MGP_129S1SvImJ_P0076625 Ccdc136 protein_coding protein_coding MGP_129S1SvImJ_T0076626.1 MGP_129S1SvImJ_G0030522.1 mouse_genomes_project 6 27188495 27218886 + MGP_129S1SvImJ_P0076626 Ccdc136 protein_coding protein_coding MGP_129S1SvImJ_T0076627.1 MGP_129S1SvImJ_G0030522.1 mouse_genomes_project 6 27188537 27218932 + MGP_129S1SvImJ_P0076627 Ccdc136 protein_coding protein_coding MGP_129S1SvImJ_T0076628.1 MGP_129S1SvImJ_G0030522.1 mouse_genomes_project 6 27188537 27214030 + MGP_129S1SvImJ_P0076628 Ccdc136 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0076629.1 MGP_129S1SvImJ_G0030522.1 mouse_genomes_project 6 27190778 27218886 + MGP_129S1SvImJ_P0076629 Ccdc136 protein_coding protein_coding MGP_129S1SvImJ_T0076630.1 MGP_129S1SvImJ_G0030522.1 mouse_genomes_project 6 27190778 27218893 + MGP_129S1SvImJ_P0076630 Ccdc136 protein_coding protein_coding MGP_129S1SvImJ_T0076631.1 MGP_129S1SvImJ_G0030522.1 mouse_genomes_project 6 27194715 27218795 + MGP_129S1SvImJ_P0076631 Ccdc136 protein_coding protein_coding MGP_129S1SvImJ_T0076632.1 MGP_129S1SvImJ_G0030522.1 mouse_genomes_project 6 27202042 27218926 + MGP_129S1SvImJ_P0076632 Ccdc136 protein_coding protein_coding MGP_129S1SvImJ_T0076633.1 MGP_129S1SvImJ_G0030522.1 mouse_genomes_project 6 27204421 27218890 + Ccdc136 protein_coding processed_transcript MGP_129S1SvImJ_T0076634.1 MGP_129S1SvImJ_G0030522.1 mouse_genomes_project 6 27206889 27218892 + Ccdc136 protein_coding processed_transcript MGP_129S1SvImJ_T0077391.1 MGP_129S1SvImJ_G0030702.1 mouse_genomes_project 6 47553851 47574488 + MGP_129S1SvImJ_P0077391 Zfp775 protein_coding protein_coding MGP_129S1SvImJ_T0077392.1 MGP_129S1SvImJ_G0030702.1 mouse_genomes_project 6 47557326 47571095 + MGP_129S1SvImJ_P0077392 Zfp775 protein_coding protein_coding MGP_129S1SvImJ_T0077393.1 MGP_129S1SvImJ_G0030702.1 mouse_genomes_project 6 47564532 47574488 + MGP_129S1SvImJ_P0077393 Zfp775 protein_coding protein_coding MGP_129S1SvImJ_T0077139.1 MGP_129S1SvImJ_G0030619.1 mouse_genomes_project 6 39389481 39410653 - MGP_129S1SvImJ_P0077139 1700074P13Rik protein_coding protein_coding MGP_129S1SvImJ_T0077140.1 MGP_129S1SvImJ_G0030619.1 mouse_genomes_project 6 39389504 39410713 - MGP_129S1SvImJ_P0077140 1700074P13Rik protein_coding protein_coding MGP_129S1SvImJ_T0077141.1 MGP_129S1SvImJ_G0030619.1 mouse_genomes_project 6 39390813 39400891 - MGP_129S1SvImJ_P0077141 1700074P13Rik protein_coding protein_coding MGP_129S1SvImJ_T0002706.1 MGP_129S1SvImJ_G0002587.1 mouse_genomes_project 6 39625956 39626427 + MGP_129S1SvImJ_P0002706 Trbv15 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0001929.1 MGP_129S1SvImJ_G0001842.1 mouse_genomes_project 6 1233696 1234421 - TEC TEC MGP_129S1SvImJ_T0002187.1 MGP_129S1SvImJ_G0002099.1 mouse_genomes_project 6 141498864 141499671 + TEC TEC MGP_129S1SvImJ_T0077689.1 MGP_129S1SvImJ_G0030772.1 mouse_genomes_project 6 54737914 54750036 + MGP_129S1SvImJ_P0077689 Aqp1 protein_coding protein_coding MGP_129S1SvImJ_T0005147.1 MGP_129S1SvImJ_G0004394.1 mouse_genomes_project 6 150441414 150443660 + Gm15499 antisense antisense MGP_129S1SvImJ_T0008565.1 MGP_129S1SvImJ_G0006933.1 mouse_genomes_project 6 30756902 30757561 - BC049739 lincRNA lincRNA MGP_129S1SvImJ_T0008735.1 MGP_129S1SvImJ_G0007061.1 mouse_genomes_project 6 127547591 127550182 + Gm43971 lincRNA lincRNA MGP_129S1SvImJ_T0000216.1 MGP_129S1SvImJ_G0000166.1 mouse_genomes_project 6 70460373 70460951 - MGP_129S1SvImJ_P0000216 Igkv8-21 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0005128.1 MGP_129S1SvImJ_G0004378.1 mouse_genomes_project 6 140241270 140250819 + Gm14330 antisense antisense MGP_129S1SvImJ_T0076309.1 MGP_129S1SvImJ_G0030458.1 mouse_genomes_project 6 10233947 10310865 - MGP_129S1SvImJ_P0076309 protein_coding protein_coding MGP_129S1SvImJ_T0076310.1 MGP_129S1SvImJ_G0030458.1 mouse_genomes_project 6 10252429 10255475 - protein_coding retained_intron MGP_129S1SvImJ_T0076311.1 MGP_129S1SvImJ_G0030458.1 mouse_genomes_project 6 10266851 10310865 - MGP_129S1SvImJ_P0076311 protein_coding protein_coding MGP_129S1SvImJ_T0076312.1 MGP_129S1SvImJ_G0030458.1 mouse_genomes_project 6 10277286 10289837 - protein_coding retained_intron MGP_129S1SvImJ_T0005154.1 MGP_129S1SvImJ_G0004400.1 mouse_genomes_project 6 154060784 154063054 + 3010003L21Rik antisense antisense MGP_129S1SvImJ_T0005155.1 MGP_129S1SvImJ_G0004400.1 mouse_genomes_project 6 154060784 154063046 + 3010003L21Rik antisense antisense MGP_129S1SvImJ_T0008616.1 MGP_129S1SvImJ_G0006966.1 mouse_genomes_project 6 51779516 51786354 + Gm44028 lincRNA lincRNA MGP_129S1SvImJ_T0076286.1 MGP_129S1SvImJ_G0030455.1 mouse_genomes_project 6 8913801 8939401 + MGP_129S1SvImJ_P0076286 Phf14 protein_coding protein_coding MGP_129S1SvImJ_T0076287.1 MGP_129S1SvImJ_G0030455.1 mouse_genomes_project 6 8913876 8963202 + MGP_129S1SvImJ_P0076287 Phf14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076288.1 MGP_129S1SvImJ_G0030455.1 mouse_genomes_project 6 8931871 9017918 + MGP_129S1SvImJ_P0076288 Phf14 protein_coding protein_coding MGP_129S1SvImJ_T0076289.1 MGP_129S1SvImJ_G0030455.1 mouse_genomes_project 6 8931905 9017986 + MGP_129S1SvImJ_P0076289 Phf14 protein_coding protein_coding MGP_129S1SvImJ_T0076290.1 MGP_129S1SvImJ_G0030455.1 mouse_genomes_project 6 8931906 9091406 + MGP_129S1SvImJ_P0076290 Phf14 protein_coding protein_coding MGP_129S1SvImJ_T0076291.1 MGP_129S1SvImJ_G0030455.1 mouse_genomes_project 6 8932177 9048932 + MGP_129S1SvImJ_P0076291 Phf14 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0076292.1 MGP_129S1SvImJ_G0030455.1 mouse_genomes_project 6 8932773 8996340 + MGP_129S1SvImJ_P0076292 Phf14 protein_coding protein_coding MGP_129S1SvImJ_T0076293.1 MGP_129S1SvImJ_G0030455.1 mouse_genomes_project 6 8996945 8998537 + Phf14 protein_coding retained_intron MGP_129S1SvImJ_T0076294.1 MGP_129S1SvImJ_G0030455.1 mouse_genomes_project 6 9000781 9005219 + Phf14 protein_coding retained_intron MGP_129S1SvImJ_T0076295.1 MGP_129S1SvImJ_G0030455.1 mouse_genomes_project 6 9016724 9091301 + MGP_129S1SvImJ_P0076295 Phf14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076296.1 MGP_129S1SvImJ_G0030455.1 mouse_genomes_project 6 9051194 9057097 + Phf14 protein_coding retained_intron MGP_129S1SvImJ_T0015304.1 MGP_129S1SvImJ_G0013393.1 mouse_genomes_project 6 22618404 22619200 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015580.1 MGP_129S1SvImJ_G0013669.1 mouse_genomes_project 6 120511872 120512373 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101257.1 MGP_129S1SvImJ_G0039324.1 mouse_genomes_project 6 68743993 68744126 + Gm25833 snoRNA snoRNA MGP_129S1SvImJ_T0015588.1 MGP_129S1SvImJ_G0013677.1 mouse_genomes_project 6 124506468 124506741 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018313.1 MGP_129S1SvImJ_G0015637.1 mouse_genomes_project 6 63084081 63091842 - 9330118I20Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018314.1 MGP_129S1SvImJ_G0015637.1 mouse_genomes_project 6 63089605 63094092 - 9330118I20Rik processed_transcript retained_intron MGP_129S1SvImJ_T0015289.1 MGP_129S1SvImJ_G0013378.1 mouse_genomes_project 6 16453496 16454808 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077081.1 MGP_129S1SvImJ_G0030600.1 mouse_genomes_project 6 37988900 38001567 + MGP_129S1SvImJ_P0077081 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078375.1 MGP_129S1SvImJ_G0030941.1 mouse_genomes_project 6 84830901 84838470 + MGP_129S1SvImJ_P0078375 Nagk protein_coding protein_coding MGP_129S1SvImJ_T0078376.1 MGP_129S1SvImJ_G0030941.1 mouse_genomes_project 6 84830947 84838468 + MGP_129S1SvImJ_P0078376 Nagk protein_coding protein_coding MGP_129S1SvImJ_T0078377.1 MGP_129S1SvImJ_G0030941.1 mouse_genomes_project 6 84831080 84834533 + Nagk protein_coding retained_intron MGP_129S1SvImJ_T0078378.1 MGP_129S1SvImJ_G0030941.1 mouse_genomes_project 6 84831127 84838248 + Nagk protein_coding processed_transcript MGP_129S1SvImJ_T0078379.1 MGP_129S1SvImJ_G0030941.1 mouse_genomes_project 6 84831154 84839334 + MGP_129S1SvImJ_P0078379 Nagk protein_coding protein_coding MGP_129S1SvImJ_T0078380.1 MGP_129S1SvImJ_G0030941.1 mouse_genomes_project 6 84832161 84832913 + Nagk protein_coding retained_intron MGP_129S1SvImJ_T0078381.1 MGP_129S1SvImJ_G0030941.1 mouse_genomes_project 6 84832943 84836182 + Nagk protein_coding retained_intron MGP_129S1SvImJ_T0078382.1 MGP_129S1SvImJ_G0030941.1 mouse_genomes_project 6 84833861 84835277 + Nagk protein_coding retained_intron MGP_129S1SvImJ_T0078383.1 MGP_129S1SvImJ_G0030941.1 mouse_genomes_project 6 84833894 84837046 + Nagk protein_coding processed_transcript MGP_129S1SvImJ_T0078384.1 MGP_129S1SvImJ_G0030941.1 mouse_genomes_project 6 84838061 84839932 + Nagk protein_coding retained_intron MGP_129S1SvImJ_T0101245.1 MGP_129S1SvImJ_G0039312.1 mouse_genomes_project 6 53204766 53204898 - Gm22910 snoRNA snoRNA MGP_129S1SvImJ_T0015644.1 MGP_129S1SvImJ_G0013733.1 mouse_genomes_project 6 135577481 135577594 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080393.1 MGP_129S1SvImJ_G0031334.1 mouse_genomes_project 6 132340234 132342198 - Klrb1 protein_coding processed_transcript MGP_129S1SvImJ_T0080394.1 MGP_129S1SvImJ_G0031334.1 mouse_genomes_project 6 132340848 132360324 - MGP_129S1SvImJ_P0080394 Klrb1 protein_coding protein_coding MGP_129S1SvImJ_T0077485.1 MGP_129S1SvImJ_G0030726.1 mouse_genomes_project 6 48878202 48885003 + MGP_129S1SvImJ_P0077485 Npy protein_coding protein_coding MGP_129S1SvImJ_T0008541.1 MGP_129S1SvImJ_G0006917.1 mouse_genomes_project 6 28347852 28351329 + 1700012C14Rik lincRNA lincRNA MGP_129S1SvImJ_T0008542.1 MGP_129S1SvImJ_G0006917.1 mouse_genomes_project 6 28348709 28351381 + 1700012C14Rik lincRNA lincRNA MGP_129S1SvImJ_T0079955.1 MGP_129S1SvImJ_G0031242.1 mouse_genomes_project 6 126379159 126396520 + MGP_129S1SvImJ_P0079955 Clec4n protein_coding protein_coding MGP_129S1SvImJ_T0079956.1 MGP_129S1SvImJ_G0031242.1 mouse_genomes_project 6 126379170 126396518 + MGP_129S1SvImJ_P0079956 Clec4n protein_coding protein_coding MGP_129S1SvImJ_T0079957.1 MGP_129S1SvImJ_G0031242.1 mouse_genomes_project 6 126379173 126380144 + Clec4n protein_coding processed_transcript MGP_129S1SvImJ_T0079958.1 MGP_129S1SvImJ_G0031242.1 mouse_genomes_project 6 126379173 126396518 + MGP_129S1SvImJ_P0079958 Clec4n protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079959.1 MGP_129S1SvImJ_G0031242.1 mouse_genomes_project 6 126379173 126396518 + MGP_129S1SvImJ_P0079959 Clec4n protein_coding protein_coding MGP_129S1SvImJ_T0079960.1 MGP_129S1SvImJ_G0031242.1 mouse_genomes_project 6 126379334 126396084 + MGP_129S1SvImJ_P0079960 Clec4n protein_coding protein_coding MGP_129S1SvImJ_T0101242.1 MGP_129S1SvImJ_G0039309.1 mouse_genomes_project 6 47911889 47912019 + Gm24348 snoRNA snoRNA MGP_129S1SvImJ_T0077790.1 MGP_129S1SvImJ_G0030815.1 mouse_genomes_project 6 58025880 58026933 - MGP_129S1SvImJ_P0077790 Vmn1r30 protein_coding protein_coding MGP_129S1SvImJ_T0076555.1 MGP_129S1SvImJ_G0030508.1 mouse_genomes_project 6 26150874 26153849 + MGP_129S1SvImJ_P0076555 Arf5 protein_coding protein_coding MGP_129S1SvImJ_T0076556.1 MGP_129S1SvImJ_G0030508.1 mouse_genomes_project 6 26150898 26153558 + MGP_129S1SvImJ_P0076556 Arf5 protein_coding protein_coding MGP_129S1SvImJ_T0076557.1 MGP_129S1SvImJ_G0030508.1 mouse_genomes_project 6 26151017 26151934 + Arf5 protein_coding retained_intron MGP_129S1SvImJ_T0079020.1 MGP_129S1SvImJ_G0031066.1 mouse_genomes_project 6 96913666 96918276 + MGP_129S1SvImJ_P0079020 Kbtbd8 protein_coding protein_coding MGP_129S1SvImJ_T0079021.1 MGP_129S1SvImJ_G0031066.1 mouse_genomes_project 6 96914335 96923326 + MGP_129S1SvImJ_P0079021 Kbtbd8 protein_coding protein_coding MGP_129S1SvImJ_T0079022.1 MGP_129S1SvImJ_G0031066.1 mouse_genomes_project 6 96914410 96918183 + Kbtbd8 protein_coding processed_transcript MGP_129S1SvImJ_T0005139.1 MGP_129S1SvImJ_G0004387.1 mouse_genomes_project 6 149415197 149435336 + Sox5os2 antisense antisense MGP_129S1SvImJ_T0008498.1 MGP_129S1SvImJ_G0006891.1 mouse_genomes_project 6 766502 786387 - Gm43986 lincRNA lincRNA MGP_129S1SvImJ_T0080754.1 MGP_129S1SvImJ_G0031444.1 mouse_genomes_project 6 144264929 144305140 + MGP_129S1SvImJ_P0080754 Pik3c2g protein_coding protein_coding MGP_129S1SvImJ_T0080755.1 MGP_129S1SvImJ_G0031444.1 mouse_genomes_project 6 144264945 144319439 + MGP_129S1SvImJ_P0080755 Pik3c2g protein_coding protein_coding MGP_129S1SvImJ_T0080756.1 MGP_129S1SvImJ_G0031444.1 mouse_genomes_project 6 144277079 144319546 + MGP_129S1SvImJ_P0080756 Pik3c2g protein_coding protein_coding MGP_129S1SvImJ_T0080757.1 MGP_129S1SvImJ_G0031444.1 mouse_genomes_project 6 144277082 144343190 + Pik3c2g protein_coding processed_transcript MGP_129S1SvImJ_T0080758.1 MGP_129S1SvImJ_G0031444.1 mouse_genomes_project 6 144294187 144343190 + MGP_129S1SvImJ_P0080758 Pik3c2g protein_coding protein_coding MGP_129S1SvImJ_T0080759.1 MGP_129S1SvImJ_G0031444.1 mouse_genomes_project 6 144296384 144638434 + MGP_129S1SvImJ_P0080759 Pik3c2g protein_coding unknown_likely_coding MGP_129S1SvImJ_T0080760.1 MGP_129S1SvImJ_G0031444.1 mouse_genomes_project 6 144304540 144319212 + MGP_129S1SvImJ_P0080760 Pik3c2g protein_coding protein_coding MGP_129S1SvImJ_T0080761.1 MGP_129S1SvImJ_G0031444.1 mouse_genomes_project 6 144368379 144504297 + Pik3c2g protein_coding processed_transcript MGP_129S1SvImJ_T0080762.1 MGP_129S1SvImJ_G0031444.1 mouse_genomes_project 6 144368379 144639775 + MGP_129S1SvImJ_P0080762 Pik3c2g protein_coding protein_coding MGP_129S1SvImJ_T0080763.1 MGP_129S1SvImJ_G0031444.1 mouse_genomes_project 6 144430550 144499175 + Pik3c2g protein_coding retained_intron MGP_129S1SvImJ_T0080764.1 MGP_129S1SvImJ_G0031444.1 mouse_genomes_project 6 144494307 144639775 + Pik3c2g protein_coding processed_transcript MGP_129S1SvImJ_T0080765.1 MGP_129S1SvImJ_G0031444.1 mouse_genomes_project 6 144494365 144516622 + Pik3c2g protein_coding processed_transcript MGP_129S1SvImJ_T0080766.1 MGP_129S1SvImJ_G0031444.1 mouse_genomes_project 6 144494443 144562407 + Pik3c2g protein_coding processed_transcript MGP_129S1SvImJ_T0080768.1 MGP_129S1SvImJ_G0031444.1 mouse_genomes_project 6 144496307 144639775 + MGP_129S1SvImJ_P0080768 Pik3c2g protein_coding protein_coding MGP_129S1SvImJ_T0080769.1 MGP_129S1SvImJ_G0031444.1 mouse_genomes_project 6 144586550 144611083 + Pik3c2g protein_coding processed_transcript MGP_129S1SvImJ_T0079926.1 MGP_129S1SvImJ_G0031232.1 mouse_genomes_project 6 125835647 125853156 - MGP_129S1SvImJ_P0079926 Slc2a3 protein_coding protein_coding MGP_129S1SvImJ_T0079927.1 MGP_129S1SvImJ_G0031232.1 mouse_genomes_project 6 125835664 125852933 - Slc2a3 protein_coding retained_intron MGP_129S1SvImJ_T0079928.1 MGP_129S1SvImJ_G0031232.1 mouse_genomes_project 6 125837769 125852801 - MGP_129S1SvImJ_P0079928 Slc2a3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079929.1 MGP_129S1SvImJ_G0031232.1 mouse_genomes_project 6 125839460 125842731 - Slc2a3 protein_coding retained_intron MGP_129S1SvImJ_T0079930.1 MGP_129S1SvImJ_G0031232.1 mouse_genomes_project 6 125847500 125917166 - MGP_129S1SvImJ_P0079930 Slc2a3 protein_coding protein_coding MGP_129S1SvImJ_T0079931.1 MGP_129S1SvImJ_G0031232.1 mouse_genomes_project 6 125847693 125894216 - MGP_129S1SvImJ_P0079931 Slc2a3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079932.1 MGP_129S1SvImJ_G0031232.1 mouse_genomes_project 6 125850248 125852673 - MGP_129S1SvImJ_P0079932 Slc2a3 protein_coding protein_coding MGP_129S1SvImJ_T0079933.1 MGP_129S1SvImJ_G0031232.1 mouse_genomes_project 6 125850307 125853331 - MGP_129S1SvImJ_P0079933 Slc2a3 protein_coding protein_coding MGP_129S1SvImJ_T0008718.1 MGP_129S1SvImJ_G0007048.1 mouse_genomes_project 6 120117355 120120396 - Gm4640 lincRNA lincRNA MGP_129S1SvImJ_T0008690.1 MGP_129S1SvImJ_G0007025.1 mouse_genomes_project 6 96730663 96738842 + 4930511E03Rik lincRNA lincRNA MGP_129S1SvImJ_T0008799.1 MGP_129S1SvImJ_G0007106.1 mouse_genomes_project 6 153801933 153812070 + Gm44115 lincRNA lincRNA MGP_129S1SvImJ_T0077995.1 MGP_129S1SvImJ_G0030864.1 mouse_genomes_project 6 72337500 72381921 + MGP_129S1SvImJ_P0077995 Immt protein_coding protein_coding MGP_129S1SvImJ_T0077996.1 MGP_129S1SvImJ_G0030864.1 mouse_genomes_project 6 72337513 72361902 + Immt protein_coding retained_intron MGP_129S1SvImJ_T0077997.1 MGP_129S1SvImJ_G0030864.1 mouse_genomes_project 6 72337514 72367819 + MGP_129S1SvImJ_P0077997 Immt protein_coding protein_coding MGP_129S1SvImJ_T0077998.1 MGP_129S1SvImJ_G0030864.1 mouse_genomes_project 6 72337544 72384116 + MGP_129S1SvImJ_P0077998 Immt protein_coding protein_coding MGP_129S1SvImJ_T0077999.1 MGP_129S1SvImJ_G0030864.1 mouse_genomes_project 6 72337547 72381975 + MGP_129S1SvImJ_P0077999 Immt protein_coding protein_coding MGP_129S1SvImJ_T0078000.1 MGP_129S1SvImJ_G0030864.1 mouse_genomes_project 6 72337552 72384109 + MGP_129S1SvImJ_P0078000 Immt protein_coding protein_coding MGP_129S1SvImJ_T0078001.1 MGP_129S1SvImJ_G0030864.1 mouse_genomes_project 6 72337566 72386244 + MGP_129S1SvImJ_P0078001 Immt protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078002.1 MGP_129S1SvImJ_G0030864.1 mouse_genomes_project 6 72337593 72363671 + MGP_129S1SvImJ_P0078002 Immt protein_coding protein_coding MGP_129S1SvImJ_T0078003.1 MGP_129S1SvImJ_G0030864.1 mouse_genomes_project 6 72370103 72373570 + Immt protein_coding retained_intron MGP_129S1SvImJ_T0078004.1 MGP_129S1SvImJ_G0030864.1 mouse_genomes_project 6 72377019 72380069 + Immt protein_coding retained_intron MGP_129S1SvImJ_T0078005.1 MGP_129S1SvImJ_G0030864.1 mouse_genomes_project 6 72378123 72384113 + Immt protein_coding retained_intron MGP_129S1SvImJ_T0078006.1 MGP_129S1SvImJ_G0030864.1 mouse_genomes_project 6 72378401 72386247 + MGP_129S1SvImJ_P0078006 Immt protein_coding protein_coding MGP_129S1SvImJ_T0078007.1 MGP_129S1SvImJ_G0030864.1 mouse_genomes_project 6 72378487 72381523 + MGP_129S1SvImJ_P0078007 Immt protein_coding protein_coding MGP_129S1SvImJ_T0080352.1 MGP_129S1SvImJ_G0031323.1 mouse_genomes_project 6 131976541 131989203 + MGP_129S1SvImJ_P0080352 4933413G19Rik protein_coding protein_coding MGP_129S1SvImJ_T0080353.1 MGP_129S1SvImJ_G0031323.1 mouse_genomes_project 6 131976541 131989867 + MGP_129S1SvImJ_P0080353 4933413G19Rik protein_coding protein_coding MGP_129S1SvImJ_T0077880.1 MGP_129S1SvImJ_G0030833.1 mouse_genomes_project 6 65594926 65640515 + MGP_129S1SvImJ_P0077880 Ndnf protein_coding protein_coding MGP_129S1SvImJ_T0077881.1 MGP_129S1SvImJ_G0030833.1 mouse_genomes_project 6 65629618 65631629 + Ndnf protein_coding retained_intron MGP_129S1SvImJ_T0101258.1 MGP_129S1SvImJ_G0039325.1 mouse_genomes_project 6 71291359 71291495 + Gm23346 snoRNA snoRNA MGP_129S1SvImJ_T0100009.1 MGP_129S1SvImJ_G0038076.1 mouse_genomes_project 6 84748327 84748424 + Gm25054 snRNA snRNA MGP_129S1SvImJ_T0002211.1 MGP_129S1SvImJ_G0002123.1 mouse_genomes_project 6 153934044 153935705 + TEC TEC MGP_129S1SvImJ_T0077759.1 MGP_129S1SvImJ_G0030798.1 mouse_genomes_project 6 56906003 56907121 + MGP_129S1SvImJ_P0077759 Vmn1r19 protein_coding protein_coding MGP_129S1SvImJ_T0002053.1 MGP_129S1SvImJ_G0001966.1 mouse_genomes_project 6 81145872 81149424 + TEC TEC MGP_129S1SvImJ_T0076219.1 MGP_129S1SvImJ_G0030438.1 mouse_genomes_project 6 2920135 3107594 - MGP_129S1SvImJ_P0076219 Slc25a13 protein_coding protein_coding MGP_129S1SvImJ_T0076220.1 MGP_129S1SvImJ_G0030438.1 mouse_genomes_project 6 2920136 3107649 - MGP_129S1SvImJ_P0076220 Slc25a13 protein_coding protein_coding MGP_129S1SvImJ_T0076221.1 MGP_129S1SvImJ_G0030438.1 mouse_genomes_project 6 2948174 2975122 - Slc25a13 protein_coding processed_transcript MGP_129S1SvImJ_T0076222.1 MGP_129S1SvImJ_G0030438.1 mouse_genomes_project 6 2994935 3056645 - Slc25a13 protein_coding processed_transcript MGP_129S1SvImJ_T0076223.1 MGP_129S1SvImJ_G0030438.1 mouse_genomes_project 6 3011712 3076934 - Slc25a13 protein_coding retained_intron MGP_129S1SvImJ_T0098988.1 MGP_129S1SvImJ_G0037062.1 mouse_genomes_project 6 101325923 101329816 - Gm20705 sense_intronic sense_intronic MGP_129S1SvImJ_T0015666.1 MGP_129S1SvImJ_G0013755.1 mouse_genomes_project 6 144730448 144731638 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008758.1 MGP_129S1SvImJ_G0007079.1 mouse_genomes_project 6 139233058 139234184 - Gm44238 lincRNA lincRNA MGP_129S1SvImJ_T0015379.1 MGP_129S1SvImJ_G0013468.1 mouse_genomes_project 6 57441880 57442249 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002090.1 MGP_129S1SvImJ_G0002003.1 mouse_genomes_project 6 89603000 89603258 - TEC TEC MGP_129S1SvImJ_T0101936.1 MGP_129S1SvImJ_G0039830.1 mouse_genomes_project 6 57205844 57206061 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0078430.1 MGP_129S1SvImJ_G0030946.1 mouse_genomes_project 6 85727554 86182481 - MGP_129S1SvImJ_P0078430 Exoc6b protein_coding protein_coding MGP_129S1SvImJ_T0078431.1 MGP_129S1SvImJ_G0030946.1 mouse_genomes_project 6 85937604 86182481 - Exoc6b protein_coding retained_intron MGP_129S1SvImJ_T0078432.1 MGP_129S1SvImJ_G0030946.1 mouse_genomes_project 6 85938488 86182425 - Exoc6b protein_coding retained_intron MGP_129S1SvImJ_T0078433.1 MGP_129S1SvImJ_G0030946.1 mouse_genomes_project 6 85956611 86182470 - MGP_129S1SvImJ_P0078433 Exoc6b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078434.1 MGP_129S1SvImJ_G0030946.1 mouse_genomes_project 6 85994289 85998298 - Exoc6b protein_coding retained_intron MGP_129S1SvImJ_T0078435.1 MGP_129S1SvImJ_G0030946.1 mouse_genomes_project 6 86056665 86182470 - Exoc6b protein_coding processed_transcript MGP_129S1SvImJ_T0078436.1 MGP_129S1SvImJ_G0030946.1 mouse_genomes_project 6 86098819 86182436 - Exoc6b protein_coding retained_intron MGP_129S1SvImJ_T0078437.1 MGP_129S1SvImJ_G0030946.1 mouse_genomes_project 6 86118272 86182443 - Exoc6b protein_coding retained_intron MGP_129S1SvImJ_T0101232.1 MGP_129S1SvImJ_G0039299.1 mouse_genomes_project 6 22647594 22647726 - Gm24443 snoRNA snoRNA MGP_129S1SvImJ_T0101275.1 MGP_129S1SvImJ_G0039342.1 mouse_genomes_project 6 118457922 118458062 - Snora7a snoRNA snoRNA MGP_129S1SvImJ_T0002198.1 MGP_129S1SvImJ_G0002110.1 mouse_genomes_project 6 148877257 148879385 - TEC TEC MGP_129S1SvImJ_T0079983.1 MGP_129S1SvImJ_G0031255.1 mouse_genomes_project 6 127600535 127611302 - MGP_129S1SvImJ_P0079983 1700013D24Rik protein_coding protein_coding MGP_129S1SvImJ_T0079984.1 MGP_129S1SvImJ_G0031255.1 mouse_genomes_project 6 127600540 127611285 - 1700013D24Rik protein_coding lincRNA MGP_129S1SvImJ_T0010838.1 MGP_129S1SvImJ_G0008954.1 mouse_genomes_project 6 141268997 141269138 - Gm44364 miRNA miRNA MGP_129S1SvImJ_T0080636.1 MGP_129S1SvImJ_G0031421.1 mouse_genomes_project 6 140811182 140825611 - MGP_129S1SvImJ_P0080636 E330021D16Rik protein_coding protein_coding MGP_129S1SvImJ_T0080637.1 MGP_129S1SvImJ_G0031421.1 mouse_genomes_project 6 140811590 140812706 - MGP_129S1SvImJ_P0080637 E330021D16Rik protein_coding protein_coding MGP_129S1SvImJ_T0080638.1 MGP_129S1SvImJ_G0031421.1 mouse_genomes_project 6 140812370 140825606 - MGP_129S1SvImJ_P0080638 E330021D16Rik protein_coding protein_coding MGP_129S1SvImJ_T0002709.1 MGP_129S1SvImJ_G0002590.1 mouse_genomes_project 6 39665797 39666471 + MGP_129S1SvImJ_P0002709 Trbv19 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0080524.1 MGP_129S1SvImJ_G0031386.1 mouse_genomes_project 6 136865472 136866516 + MGP_129S1SvImJ_P0080524 Tas2r102 protein_coding protein_coding MGP_129S1SvImJ_T0008608.1 MGP_129S1SvImJ_G0006961.1 mouse_genomes_project 6 50900688 50917469 - Gm44191 lincRNA lincRNA MGP_129S1SvImJ_T0102618.1 MGP_129S1SvImJ_G0040451.1 mouse_genomes_project 6 57661760 57662654 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0077254.1 MGP_129S1SvImJ_G0030665.1 mouse_genomes_project 6 41438801 41439734 + MGP_129S1SvImJ_P0077254 Olfr448 protein_coding protein_coding MGP_129S1SvImJ_T0008625.1 MGP_129S1SvImJ_G0006974.1 mouse_genomes_project 6 59789794 59876770 + lincRNA lincRNA MGP_129S1SvImJ_T0008626.1 MGP_129S1SvImJ_G0006974.1 mouse_genomes_project 6 59789836 59793778 + lincRNA lincRNA MGP_129S1SvImJ_T0080269.1 MGP_129S1SvImJ_G0031305.1 mouse_genomes_project 6 130297019 130326959 - MGP_129S1SvImJ_P0080269 Ndufa9 protein_coding protein_coding MGP_129S1SvImJ_T0080270.1 MGP_129S1SvImJ_G0031305.1 mouse_genomes_project 6 130297294 130326959 - MGP_129S1SvImJ_P0080270 Ndufa9 protein_coding protein_coding MGP_129S1SvImJ_T0080271.1 MGP_129S1SvImJ_G0031305.1 mouse_genomes_project 6 130321564 130326970 - Ndufa9 protein_coding retained_intron MGP_129S1SvImJ_T0005152.1 MGP_129S1SvImJ_G0004398.1 mouse_genomes_project 6 153071320 153100305 - Far2os2 antisense antisense MGP_129S1SvImJ_T0080231.1 MGP_129S1SvImJ_G0031296.1 mouse_genomes_project 6 128698508 128699182 + Tnfrsf1a protein_coding processed_transcript MGP_129S1SvImJ_T0080232.1 MGP_129S1SvImJ_G0031296.1 mouse_genomes_project 6 128698597 128706485 + MGP_129S1SvImJ_P0080232 Tnfrsf1a protein_coding protein_coding MGP_129S1SvImJ_T0080233.1 MGP_129S1SvImJ_G0031296.1 mouse_genomes_project 6 128698869 128711653 + MGP_129S1SvImJ_P0080233 Tnfrsf1a protein_coding protein_coding MGP_129S1SvImJ_T0080234.1 MGP_129S1SvImJ_G0031296.1 mouse_genomes_project 6 128706539 128710274 + MGP_129S1SvImJ_P0080234 Tnfrsf1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080235.1 MGP_129S1SvImJ_G0031296.1 mouse_genomes_project 6 128706933 128710947 + MGP_129S1SvImJ_P0080235 Tnfrsf1a protein_coding protein_coding MGP_129S1SvImJ_T0080236.1 MGP_129S1SvImJ_G0031296.1 mouse_genomes_project 6 128709595 128711043 + Tnfrsf1a protein_coding retained_intron MGP_129S1SvImJ_T0081007.1 MGP_129S1SvImJ_G0031488.1 mouse_genomes_project 6 151631727 151663309 - MGP_129S1SvImJ_P0081007 Tm7sf3 protein_coding protein_coding MGP_129S1SvImJ_T0081008.1 MGP_129S1SvImJ_G0031488.1 mouse_genomes_project 6 151640267 151663210 - MGP_129S1SvImJ_P0081008 Tm7sf3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081009.1 MGP_129S1SvImJ_G0031488.1 mouse_genomes_project 6 151649167 151671307 - Tm7sf3 protein_coding processed_transcript MGP_129S1SvImJ_T0081010.1 MGP_129S1SvImJ_G0031488.1 mouse_genomes_project 6 151651166 151671317 - Tm7sf3 protein_coding processed_transcript MGP_129S1SvImJ_T0005153.1 MGP_129S1SvImJ_G0004399.1 mouse_genomes_project 6 153434375 153437696 + Gm44020 antisense antisense MGP_129S1SvImJ_T0010815.1 MGP_129S1SvImJ_G0008931.1 mouse_genomes_project 6 116051040 116051189 - Gm23365 miRNA miRNA MGP_129S1SvImJ_T0015343.1 MGP_129S1SvImJ_G0013432.1 mouse_genomes_project 6 45422757 45423748 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080375.1 MGP_129S1SvImJ_G0031328.1 mouse_genomes_project 6 132104829 132152285 - MGP_129S1SvImJ_P0080375 Pzp protein_coding protein_coding MGP_129S1SvImJ_T0080376.1 MGP_129S1SvImJ_G0031328.1 mouse_genomes_project 6 132106550 132108836 - Pzp protein_coding processed_transcript MGP_129S1SvImJ_T0080377.1 MGP_129S1SvImJ_G0031328.1 mouse_genomes_project 6 132115325 132117201 - Pzp protein_coding retained_intron MGP_129S1SvImJ_T0080378.1 MGP_129S1SvImJ_G0031328.1 mouse_genomes_project 6 132146766 132152268 - MGP_129S1SvImJ_P0080378 Pzp protein_coding protein_coding MGP_129S1SvImJ_T0002597.1 MGP_129S1SvImJ_G0002498.1 mouse_genomes_project 6 40052669 40052716 + MGP_129S1SvImJ_P0002597 Trbj2-7 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0008515.1 MGP_129S1SvImJ_G0006899.1 mouse_genomes_project 6 4652496 4664900 + Gm44217 lincRNA lincRNA MGP_129S1SvImJ_T0010793.1 MGP_129S1SvImJ_G0008909.1 mouse_genomes_project 6 71738281 71738412 + Mir8112 miRNA miRNA MGP_129S1SvImJ_T0015408.1 MGP_129S1SvImJ_G0013497.1 mouse_genomes_project 6 65150852 65151203 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015537.1 MGP_129S1SvImJ_G0013626.1 mouse_genomes_project 6 104762878 104765914 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101959.1 MGP_129S1SvImJ_G0039842.1 mouse_genomes_project 6 135542662 135546929 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101252.1 MGP_129S1SvImJ_G0039319.1 mouse_genomes_project 6 59778566 59778695 - Gm22723 snoRNA snoRNA MGP_129S1SvImJ_T0078089.1 MGP_129S1SvImJ_G0030879.1 mouse_genomes_project 6 73113415 73132825 + MGP_129S1SvImJ_P0078089 Capg protein_coding protein_coding MGP_129S1SvImJ_T0078090.1 MGP_129S1SvImJ_G0030879.1 mouse_genomes_project 6 73113561 73132823 + MGP_129S1SvImJ_P0078090 Capg protein_coding protein_coding MGP_129S1SvImJ_T0078091.1 MGP_129S1SvImJ_G0030879.1 mouse_genomes_project 6 73114820 73125143 + MGP_129S1SvImJ_P0078091 Capg protein_coding protein_coding MGP_129S1SvImJ_T0078092.1 MGP_129S1SvImJ_G0030879.1 mouse_genomes_project 6 73116829 73126579 + MGP_129S1SvImJ_P0078092 Capg protein_coding protein_coding MGP_129S1SvImJ_T0078093.1 MGP_129S1SvImJ_G0030879.1 mouse_genomes_project 6 73118162 73132825 + MGP_129S1SvImJ_P0078093 Capg protein_coding protein_coding MGP_129S1SvImJ_T0078094.1 MGP_129S1SvImJ_G0030879.1 mouse_genomes_project 6 73118321 73126550 + Capg protein_coding retained_intron MGP_129S1SvImJ_T0078095.1 MGP_129S1SvImJ_G0030879.1 mouse_genomes_project 6 73118340 73124757 + MGP_129S1SvImJ_P0078095 Capg protein_coding protein_coding MGP_129S1SvImJ_T0078096.1 MGP_129S1SvImJ_G0030879.1 mouse_genomes_project 6 73118347 73124526 + Capg protein_coding retained_intron MGP_129S1SvImJ_T0078097.1 MGP_129S1SvImJ_G0030879.1 mouse_genomes_project 6 73118541 73124715 + MGP_129S1SvImJ_P0078097 Capg protein_coding protein_coding MGP_129S1SvImJ_T0078098.1 MGP_129S1SvImJ_G0030879.1 mouse_genomes_project 6 73121828 73127066 + MGP_129S1SvImJ_P0078098 Capg protein_coding protein_coding MGP_129S1SvImJ_T0078099.1 MGP_129S1SvImJ_G0030879.1 mouse_genomes_project 6 73124869 73126656 + Capg protein_coding retained_intron MGP_129S1SvImJ_T0079307.1 MGP_129S1SvImJ_G0031120.1 mouse_genomes_project 6 115894487 115905077 + MGP_129S1SvImJ_P0079307 Arpc4 protein_coding protein_coding MGP_129S1SvImJ_T0008678.1 MGP_129S1SvImJ_G0007016.1 mouse_genomes_project 6 90707700 90709022 - Gm44204 lincRNA lincRNA MGP_129S1SvImJ_T0008620.1 MGP_129S1SvImJ_G0006969.1 mouse_genomes_project 6 54555052 54567818 + Gm43995 lincRNA lincRNA MGP_129S1SvImJ_T0002193.1 MGP_129S1SvImJ_G0002105.1 mouse_genomes_project 6 144997669 144998663 - TEC TEC MGP_129S1SvImJ_T0077379.1 MGP_129S1SvImJ_G0030698.1 mouse_genomes_project 6 47539552 47540688 + MGP_129S1SvImJ_P0077379 Gm5111 protein_coding protein_coding MGP_129S1SvImJ_T0077380.1 MGP_129S1SvImJ_G0030698.1 mouse_genomes_project 6 47539695 47540622 + Gm5111 protein_coding retained_intron MGP_129S1SvImJ_T0077686.1 MGP_129S1SvImJ_G0030771.1 mouse_genomes_project 6 54604954 54721742 + MGP_129S1SvImJ_P0077686 Fam188b protein_coding protein_coding MGP_129S1SvImJ_T0077687.1 MGP_129S1SvImJ_G0030771.1 mouse_genomes_project 6 54604954 54679111 + MGP_129S1SvImJ_P0077687 Fam188b protein_coding protein_coding MGP_129S1SvImJ_T0077688.1 MGP_129S1SvImJ_G0030771.1 mouse_genomes_project 6 54678640 54719835 + Fam188b protein_coding processed_transcript MGP_129S1SvImJ_T0102650.1 MGP_129S1SvImJ_G0040483.1 mouse_genomes_project 6 136534421 136541494 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0011673.1 MGP_129S1SvImJ_G0009789.1 mouse_genomes_project 6 51511747 51511918 + Gm27866 misc_RNA misc_RNA MGP_129S1SvImJ_T0076603.1 MGP_129S1SvImJ_G0030518.1 mouse_genomes_project 6 27062870 27070576 + MGP_129S1SvImJ_P0076603 Fam71f2 protein_coding protein_coding MGP_129S1SvImJ_T0076604.1 MGP_129S1SvImJ_G0030518.1 mouse_genomes_project 6 27064418 27075542 + MGP_129S1SvImJ_P0076604 Fam71f2 protein_coding protein_coding MGP_129S1SvImJ_T0076605.1 MGP_129S1SvImJ_G0030518.1 mouse_genomes_project 6 27064420 27075537 + MGP_129S1SvImJ_P0076605 Fam71f2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0000345.1 MGP_129S1SvImJ_G0000287.1 mouse_genomes_project 6 70830075 70830347 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0010833.1 MGP_129S1SvImJ_G0008949.1 mouse_genomes_project 6 132587937 132587993 - Gm27336 miRNA miRNA MGP_129S1SvImJ_T0080670.1 MGP_129S1SvImJ_G0031428.1 mouse_genomes_project 6 141330903 141362621 - MGP_129S1SvImJ_P0080670 Art4 protein_coding protein_coding MGP_129S1SvImJ_T0002176.1 MGP_129S1SvImJ_G0002088.1 mouse_genomes_project 6 133369504 133369872 - TEC TEC MGP_129S1SvImJ_T0005122.1 MGP_129S1SvImJ_G0004372.1 mouse_genomes_project 6 138478578 138489073 - Gm17089 antisense antisense MGP_129S1SvImJ_T0102632.1 MGP_129S1SvImJ_G0040465.1 mouse_genomes_project 6 91146621 91147420 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0100010.1 MGP_129S1SvImJ_G0038077.1 mouse_genomes_project 6 95516882 95516988 + Gm23035 snRNA snRNA MGP_129S1SvImJ_T0077181.1 MGP_129S1SvImJ_G0030642.1 mouse_genomes_project 6 40718523 40719483 + MGP_129S1SvImJ_P0077181 Tas2r144 protein_coding protein_coding MGP_129S1SvImJ_T0010762.1 MGP_129S1SvImJ_G0008878.1 mouse_genomes_project 6 458307 458414 - Mir489 miRNA miRNA MGP_129S1SvImJ_T0076539.1 MGP_129S1SvImJ_G0030505.1 mouse_genomes_project 6 24942766 25841185 - MGP_129S1SvImJ_P0076539 Grm8 protein_coding protein_coding MGP_129S1SvImJ_T0076540.1 MGP_129S1SvImJ_G0030505.1 mouse_genomes_project 6 24942775 25832764 - MGP_129S1SvImJ_P0076540 Grm8 protein_coding protein_coding MGP_129S1SvImJ_T0076541.1 MGP_129S1SvImJ_G0030505.1 mouse_genomes_project 6 24943259 25832834 - MGP_129S1SvImJ_P0076541 Grm8 protein_coding protein_coding MGP_129S1SvImJ_T0076542.1 MGP_129S1SvImJ_G0030505.1 mouse_genomes_project 6 25448568 25839964 - MGP_129S1SvImJ_P0076542 Grm8 protein_coding protein_coding MGP_129S1SvImJ_T0076543.1 MGP_129S1SvImJ_G0030505.1 mouse_genomes_project 6 25635532 25841818 - Grm8 protein_coding processed_transcript MGP_129S1SvImJ_T0076544.1 MGP_129S1SvImJ_G0030505.1 mouse_genomes_project 6 25832702 25839768 - MGP_129S1SvImJ_P0076544 Grm8 protein_coding protein_coding MGP_129S1SvImJ_T0076545.1 MGP_129S1SvImJ_G0030505.1 mouse_genomes_project 6 25838666 25841025 - Grm8 protein_coding processed_transcript MGP_129S1SvImJ_T0001966.1 MGP_129S1SvImJ_G0001879.1 mouse_genomes_project 6 29014313 29016414 - TEC TEC MGP_129S1SvImJ_T0015291.1 MGP_129S1SvImJ_G0013380.1 mouse_genomes_project 6 17145674 17146440 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101756.1 MGP_129S1SvImJ_G0039743.1 mouse_genomes_project 6 131793988 131795153 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0008741.1 MGP_129S1SvImJ_G0007067.1 mouse_genomes_project 6 130792164 130803904 - Gm38404 lincRNA lincRNA MGP_129S1SvImJ_T0015665.1 MGP_129S1SvImJ_G0013754.1 mouse_genomes_project 6 144704548 144704920 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000341.1 MGP_129S1SvImJ_G0000283.1 mouse_genomes_project 6 70276535 70276817 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0079317.1 MGP_129S1SvImJ_G0031122.1 mouse_genomes_project 6 115933333 115937314 - MGP_129S1SvImJ_P0079317 Rpusd3 protein_coding protein_coding MGP_129S1SvImJ_T0079318.1 MGP_129S1SvImJ_G0031122.1 mouse_genomes_project 6 115933543 115934448 - Rpusd3 protein_coding retained_intron MGP_129S1SvImJ_T0079319.1 MGP_129S1SvImJ_G0031122.1 mouse_genomes_project 6 115934101 115937315 - MGP_129S1SvImJ_P0079319 Rpusd3 protein_coding protein_coding MGP_129S1SvImJ_T0079320.1 MGP_129S1SvImJ_G0031122.1 mouse_genomes_project 6 115934305 115937306 - MGP_129S1SvImJ_P0079320 Rpusd3 protein_coding protein_coding MGP_129S1SvImJ_T0079321.1 MGP_129S1SvImJ_G0031122.1 mouse_genomes_project 6 115934784 115937315 - Rpusd3 protein_coding retained_intron MGP_129S1SvImJ_T0079322.1 MGP_129S1SvImJ_G0031122.1 mouse_genomes_project 6 115934889 115937310 - MGP_129S1SvImJ_P0079322 Rpusd3 protein_coding protein_coding MGP_129S1SvImJ_T0079323.1 MGP_129S1SvImJ_G0031122.1 mouse_genomes_project 6 115935191 115937044 - Rpusd3 protein_coding retained_intron MGP_129S1SvImJ_T0079324.1 MGP_129S1SvImJ_G0031122.1 mouse_genomes_project 6 115935218 115937327 - MGP_129S1SvImJ_P0079324 Rpusd3 protein_coding protein_coding MGP_129S1SvImJ_T0079325.1 MGP_129S1SvImJ_G0031122.1 mouse_genomes_project 6 115936299 115937319 - Rpusd3 protein_coding retained_intron MGP_129S1SvImJ_T0078069.1 MGP_129S1SvImJ_G0030875.1 mouse_genomes_project 6 72935204 72941476 - MGP_129S1SvImJ_P0078069 Vamp8 protein_coding protein_coding MGP_129S1SvImJ_T0078070.1 MGP_129S1SvImJ_G0030875.1 mouse_genomes_project 6 72935209 72940684 - MGP_129S1SvImJ_P0078070 Vamp8 protein_coding protein_coding MGP_129S1SvImJ_T0077394.1 MGP_129S1SvImJ_G0030703.1 mouse_genomes_project 6 47578024 47584946 + MGP_129S1SvImJ_P0077394 AI854703 protein_coding protein_coding MGP_129S1SvImJ_T0077395.1 MGP_129S1SvImJ_G0030703.1 mouse_genomes_project 6 47578483 47580724 + MGP_129S1SvImJ_P0077395 AI854703 protein_coding protein_coding MGP_129S1SvImJ_T0077396.1 MGP_129S1SvImJ_G0030703.1 mouse_genomes_project 6 47578541 47580724 + MGP_129S1SvImJ_P0077396 AI854703 protein_coding protein_coding MGP_129S1SvImJ_T0077397.1 MGP_129S1SvImJ_G0030703.1 mouse_genomes_project 6 47579195 47584950 + MGP_129S1SvImJ_P0077397 AI854703 protein_coding protein_coding MGP_129S1SvImJ_T0008673.1 MGP_129S1SvImJ_G0007014.1 mouse_genomes_project 6 90568752 90578925 + Gm1965 lincRNA lincRNA MGP_129S1SvImJ_T0008674.1 MGP_129S1SvImJ_G0007014.1 mouse_genomes_project 6 90568763 90578943 + Gm1965 lincRNA lincRNA MGP_129S1SvImJ_T0008675.1 MGP_129S1SvImJ_G0007014.1 mouse_genomes_project 6 90568763 90578908 + Gm1965 lincRNA lincRNA MGP_129S1SvImJ_T0008676.1 MGP_129S1SvImJ_G0007014.1 mouse_genomes_project 6 90568763 90578228 + Gm1965 lincRNA lincRNA MGP_129S1SvImJ_T0077475.1 MGP_129S1SvImJ_G0030724.1 mouse_genomes_project 6 48385115 48394978 + MGP_129S1SvImJ_P0077475 Fam221a protein_coding protein_coding MGP_129S1SvImJ_T0077476.1 MGP_129S1SvImJ_G0030724.1 mouse_genomes_project 6 48385128 48407329 + MGP_129S1SvImJ_P0077476 Fam221a protein_coding protein_coding MGP_129S1SvImJ_T0077477.1 MGP_129S1SvImJ_G0030724.1 mouse_genomes_project 6 48397516 48403899 + Fam221a protein_coding processed_transcript MGP_129S1SvImJ_T0077478.1 MGP_129S1SvImJ_G0030724.1 mouse_genomes_project 6 48403695 48407717 + Fam221a protein_coding retained_intron MGP_129S1SvImJ_T0077479.1 MGP_129S1SvImJ_G0030724.1 mouse_genomes_project 6 48405922 48407662 + Fam221a protein_coding retained_intron MGP_129S1SvImJ_T0002148.1 MGP_129S1SvImJ_G0002061.1 mouse_genomes_project 6 118922388 118926046 - TEC TEC MGP_129S1SvImJ_T0015290.1 MGP_129S1SvImJ_G0013379.1 mouse_genomes_project 6 16660657 16663492 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001963.1 MGP_129S1SvImJ_G0001876.1 mouse_genomes_project 6 27351099 27352632 - TEC TEC MGP_129S1SvImJ_T0077835.1 MGP_129S1SvImJ_G0030826.1 mouse_genomes_project 6 60929114 62201216 + MGP_129S1SvImJ_P0077835 Ccser1 protein_coding protein_coding MGP_129S1SvImJ_T0077836.1 MGP_129S1SvImJ_G0030826.1 mouse_genomes_project 6 60929327 61072198 + Ccser1 protein_coding retained_intron MGP_129S1SvImJ_T0077837.1 MGP_129S1SvImJ_G0030826.1 mouse_genomes_project 6 60929328 61071829 + Ccser1 protein_coding retained_intron MGP_129S1SvImJ_T0077838.1 MGP_129S1SvImJ_G0030826.1 mouse_genomes_project 6 61070075 62198621 + MGP_129S1SvImJ_P0077838 Ccser1 protein_coding protein_coding MGP_129S1SvImJ_T0077839.1 MGP_129S1SvImJ_G0030826.1 mouse_genomes_project 6 61073021 61333381 + Ccser1 protein_coding retained_intron MGP_129S1SvImJ_T0077840.1 MGP_129S1SvImJ_G0030826.1 mouse_genomes_project 6 61078188 61333143 + Ccser1 protein_coding processed_transcript MGP_129S1SvImJ_T0077841.1 MGP_129S1SvImJ_G0030826.1 mouse_genomes_project 6 61131943 61591466 + MGP_129S1SvImJ_P0077841 Ccser1 protein_coding protein_coding MGP_129S1SvImJ_T0077842.1 MGP_129S1SvImJ_G0030826.1 mouse_genomes_project 6 61131951 61494940 + Ccser1 protein_coding retained_intron MGP_129S1SvImJ_T0077843.1 MGP_129S1SvImJ_G0030826.1 mouse_genomes_project 6 61131986 61227537 + Ccser1 protein_coding processed_transcript MGP_129S1SvImJ_T0077844.1 MGP_129S1SvImJ_G0030826.1 mouse_genomes_project 6 61333044 61601261 + MGP_129S1SvImJ_P0077844 Ccser1 protein_coding protein_coding MGP_129S1SvImJ_T0077845.1 MGP_129S1SvImJ_G0030826.1 mouse_genomes_project 6 61560359 61600800 + Ccser1 protein_coding processed_transcript MGP_129S1SvImJ_T0002754.1 MGP_129S1SvImJ_G0002629.1 mouse_genomes_project 6 39607281 39607766 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0005090.1 MGP_129S1SvImJ_G0004344.1 mouse_genomes_project 6 118480524 118486823 + antisense antisense MGP_129S1SvImJ_T0081053.1 MGP_129S1SvImJ_G0031497.1 mouse_genomes_project 6 152114890 152125268 - MGP_129S1SvImJ_P0081053 Mansc4 protein_coding protein_coding MGP_129S1SvImJ_T0081054.1 MGP_129S1SvImJ_G0031497.1 mouse_genomes_project 6 152118248 152125237 - MGP_129S1SvImJ_P0081054 Mansc4 protein_coding protein_coding MGP_129S1SvImJ_T0077871.1 MGP_129S1SvImJ_G0030831.1 mouse_genomes_project 6 65289347 65370068 + MGP_129S1SvImJ_P0077871 C130060K24Rik protein_coding protein_coding MGP_129S1SvImJ_T0077872.1 MGP_129S1SvImJ_G0030831.1 mouse_genomes_project 6 65289536 65375253 + MGP_129S1SvImJ_P0077872 C130060K24Rik protein_coding protein_coding MGP_129S1SvImJ_T0077873.1 MGP_129S1SvImJ_G0030831.1 mouse_genomes_project 6 65357734 65370096 + MGP_129S1SvImJ_P0077873 C130060K24Rik protein_coding protein_coding MGP_129S1SvImJ_T0078188.1 MGP_129S1SvImJ_G0030903.1 mouse_genomes_project 6 83000732 83056714 + MGP_129S1SvImJ_P0078188 Eva1a protein_coding protein_coding MGP_129S1SvImJ_T0078189.1 MGP_129S1SvImJ_G0030903.1 mouse_genomes_project 6 83001313 83057920 + MGP_129S1SvImJ_P0078189 Eva1a protein_coding protein_coding MGP_129S1SvImJ_T0078190.1 MGP_129S1SvImJ_G0030903.1 mouse_genomes_project 6 83001378 83006843 + Eva1a protein_coding processed_transcript MGP_129S1SvImJ_T0078191.1 MGP_129S1SvImJ_G0030903.1 mouse_genomes_project 6 83012055 83056979 + MGP_129S1SvImJ_P0078191 Eva1a protein_coding protein_coding MGP_129S1SvImJ_T0079924.1 MGP_129S1SvImJ_G0031231.1 mouse_genomes_project 6 125731299 125735082 + MGP_129S1SvImJ_P0079924 Dppa3 protein_coding protein_coding MGP_129S1SvImJ_T0079925.1 MGP_129S1SvImJ_G0031231.1 mouse_genomes_project 6 125731569 125735082 + MGP_129S1SvImJ_P0079925 Dppa3 protein_coding protein_coding MGP_129S1SvImJ_T0000170.1 MGP_129S1SvImJ_G0000130.1 mouse_genomes_project 6 68785896 68786369 + MGP_129S1SvImJ_P0000170 Igkv12-98 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000171.1 MGP_129S1SvImJ_G0000130.1 mouse_genomes_project 6 68785896 68786369 + MGP_129S1SvImJ_P0000171 Igkv12-98 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0100020.1 MGP_129S1SvImJ_G0038087.1 mouse_genomes_project 6 115513010 115513102 - Gm23244 snRNA snRNA MGP_129S1SvImJ_T0010825.1 MGP_129S1SvImJ_G0008941.1 mouse_genomes_project 6 125948751 125948812 + Mir7231 miRNA miRNA MGP_129S1SvImJ_T0005130.1 MGP_129S1SvImJ_G0004380.1 mouse_genomes_project 6 143006808 143013710 + A830011K09Rik antisense antisense MGP_129S1SvImJ_T0005131.1 MGP_129S1SvImJ_G0004380.1 mouse_genomes_project 6 143006903 143012432 + A830011K09Rik antisense antisense MGP_129S1SvImJ_T0005132.1 MGP_129S1SvImJ_G0004380.1 mouse_genomes_project 6 143006974 143014331 + A830011K09Rik antisense antisense MGP_129S1SvImJ_T0078106.1 MGP_129S1SvImJ_G0030881.1 mouse_genomes_project 6 73169271 73179222 + MGP_129S1SvImJ_P0078106 Retsat protein_coding protein_coding MGP_129S1SvImJ_T0078107.1 MGP_129S1SvImJ_G0030881.1 mouse_genomes_project 6 73169424 73178178 + MGP_129S1SvImJ_P0078107 Retsat protein_coding protein_coding MGP_129S1SvImJ_T0078108.1 MGP_129S1SvImJ_G0030881.1 mouse_genomes_project 6 73169424 73178178 + MGP_129S1SvImJ_P0078108 Retsat protein_coding protein_coding MGP_129S1SvImJ_T0078109.1 MGP_129S1SvImJ_G0030881.1 mouse_genomes_project 6 73175169 73177186 + Retsat protein_coding processed_transcript MGP_129S1SvImJ_T0078110.1 MGP_129S1SvImJ_G0030881.1 mouse_genomes_project 6 73176768 73178239 + MGP_129S1SvImJ_P0078110 Retsat protein_coding protein_coding MGP_129S1SvImJ_T0078111.1 MGP_129S1SvImJ_G0030881.1 mouse_genomes_project 6 73177441 73178008 + MGP_129S1SvImJ_P0078111 Retsat protein_coding protein_coding MGP_129S1SvImJ_T0078933.1 MGP_129S1SvImJ_G0031050.1 mouse_genomes_project 6 93290841 93369917 + MGP_129S1SvImJ_P0078933 Slc6a6 protein_coding protein_coding MGP_129S1SvImJ_T0078934.1 MGP_129S1SvImJ_G0031050.1 mouse_genomes_project 6 93290857 93345982 + Slc6a6 protein_coding processed_transcript MGP_129S1SvImJ_T0078935.1 MGP_129S1SvImJ_G0031050.1 mouse_genomes_project 6 93290883 93337734 + Slc6a6 protein_coding retained_intron MGP_129S1SvImJ_T0078936.1 MGP_129S1SvImJ_G0031050.1 mouse_genomes_project 6 93290908 93335745 + MGP_129S1SvImJ_P0078936 Slc6a6 protein_coding protein_coding MGP_129S1SvImJ_T0078937.1 MGP_129S1SvImJ_G0031050.1 mouse_genomes_project 6 93290916 93335780 + MGP_129S1SvImJ_P0078937 Slc6a6 protein_coding protein_coding MGP_129S1SvImJ_T0078938.1 MGP_129S1SvImJ_G0031050.1 mouse_genomes_project 6 93290937 93306733 + Slc6a6 protein_coding retained_intron MGP_129S1SvImJ_T0078939.1 MGP_129S1SvImJ_G0031050.1 mouse_genomes_project 6 93309064 93335666 + MGP_129S1SvImJ_P0078939 Slc6a6 protein_coding protein_coding MGP_129S1SvImJ_T0078940.1 MGP_129S1SvImJ_G0031050.1 mouse_genomes_project 6 93335761 93355883 + MGP_129S1SvImJ_P0078940 Slc6a6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078941.1 MGP_129S1SvImJ_G0031050.1 mouse_genomes_project 6 93350450 93351896 + Slc6a6 protein_coding retained_intron MGP_129S1SvImJ_T0078942.1 MGP_129S1SvImJ_G0031050.1 mouse_genomes_project 6 93359209 93361019 + Slc6a6 protein_coding retained_intron MGP_129S1SvImJ_T0078943.1 MGP_129S1SvImJ_G0031050.1 mouse_genomes_project 6 93361032 93363627 + Slc6a6 protein_coding retained_intron MGP_129S1SvImJ_T0002583.1 MGP_129S1SvImJ_G0002486.1 mouse_genomes_project 6 40041324 40041372 + MGP_129S1SvImJ_P0002583 Trbj1-1 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0011680.1 MGP_129S1SvImJ_G0009796.1 mouse_genomes_project 6 89798917 89799242 + Gm25178 misc_RNA misc_RNA MGP_129S1SvImJ_T0015327.1 MGP_129S1SvImJ_G0013416.1 mouse_genomes_project 6 38272953 38274037 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077701.1 MGP_129S1SvImJ_G0030775.1 mouse_genomes_project 6 55095292 55098742 - MGP_129S1SvImJ_P0077701 Neurod6 protein_coding protein_coding MGP_129S1SvImJ_T0077971.1 MGP_129S1SvImJ_G0030860.1 mouse_genomes_project 6 72027068 72045191 + Chmp3 protein_coding processed_transcript MGP_129S1SvImJ_T0077972.1 MGP_129S1SvImJ_G0030860.1 mouse_genomes_project 6 72027145 72064270 + MGP_129S1SvImJ_P0077972 Chmp3 protein_coding protein_coding MGP_129S1SvImJ_T0077973.1 MGP_129S1SvImJ_G0030860.1 mouse_genomes_project 6 72027145 72045210 + MGP_129S1SvImJ_P0077973 Chmp3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077974.1 MGP_129S1SvImJ_G0030860.1 mouse_genomes_project 6 72027205 72068257 + MGP_129S1SvImJ_P0077974 Chmp3 protein_coding protein_coding MGP_129S1SvImJ_T0077975.1 MGP_129S1SvImJ_G0030860.1 mouse_genomes_project 6 72027569 72060605 + Chmp3 protein_coding processed_transcript MGP_129S1SvImJ_T0077976.1 MGP_129S1SvImJ_G0030860.1 mouse_genomes_project 6 72064066 72066297 + Chmp3 protein_coding retained_intron MGP_129S1SvImJ_T0015465.1 MGP_129S1SvImJ_G0013554.1 mouse_genomes_project 6 75885084 75885586 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015684.1 MGP_129S1SvImJ_G0013773.1 mouse_genomes_project 6 153333955 153334358 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018264.1 MGP_129S1SvImJ_G0015625.1 mouse_genomes_project 6 13634262 13646898 - Gm43996 processed_transcript lincRNA MGP_129S1SvImJ_T0018265.1 MGP_129S1SvImJ_G0015625.1 mouse_genomes_project 6 13645186 13646852 - Gm43996 processed_transcript retained_intron MGP_129S1SvImJ_T0080034.1 MGP_129S1SvImJ_G0031263.1 mouse_genomes_project 6 128043808 128045325 - Grcc10 protein_coding processed_transcript MGP_129S1SvImJ_T0080035.1 MGP_129S1SvImJ_G0031263.1 mouse_genomes_project 6 128043808 128046004 - MGP_129S1SvImJ_P0080035 Grcc10 protein_coding protein_coding MGP_129S1SvImJ_T0080036.1 MGP_129S1SvImJ_G0031263.1 mouse_genomes_project 6 128043811 128045695 - Grcc10 protein_coding retained_intron MGP_129S1SvImJ_T0080037.1 MGP_129S1SvImJ_G0031263.1 mouse_genomes_project 6 128043812 128045345 - Grcc10 protein_coding retained_intron MGP_129S1SvImJ_T0080042.1 MGP_129S1SvImJ_G0031266.1 mouse_genomes_project 6 128064478 128068037 - Eno2 protein_coding retained_intron MGP_129S1SvImJ_T0080043.1 MGP_129S1SvImJ_G0031266.1 mouse_genomes_project 6 128064480 128073819 - MGP_129S1SvImJ_P0080043 Eno2 protein_coding protein_coding MGP_129S1SvImJ_T0080044.1 MGP_129S1SvImJ_G0031266.1 mouse_genomes_project 6 128064480 128073767 - MGP_129S1SvImJ_P0080044 Eno2 protein_coding protein_coding MGP_129S1SvImJ_T0080045.1 MGP_129S1SvImJ_G0031266.1 mouse_genomes_project 6 128064790 128072483 - Eno2 protein_coding retained_intron MGP_129S1SvImJ_T0080046.1 MGP_129S1SvImJ_G0031266.1 mouse_genomes_project 6 128065350 128073666 - MGP_129S1SvImJ_P0080046 Eno2 protein_coding protein_coding MGP_129S1SvImJ_T0080047.1 MGP_129S1SvImJ_G0031266.1 mouse_genomes_project 6 128065583 128067712 - Eno2 protein_coding retained_intron MGP_129S1SvImJ_T0080048.1 MGP_129S1SvImJ_G0031266.1 mouse_genomes_project 6 128065642 128067748 - Eno2 protein_coding retained_intron MGP_129S1SvImJ_T0080049.1 MGP_129S1SvImJ_G0031266.1 mouse_genomes_project 6 128067082 128068346 - Eno2 protein_coding processed_transcript MGP_129S1SvImJ_T0080050.1 MGP_129S1SvImJ_G0031266.1 mouse_genomes_project 6 128068191 128072476 - MGP_129S1SvImJ_P0080050 Eno2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080051.1 MGP_129S1SvImJ_G0031266.1 mouse_genomes_project 6 128068294 128072522 - MGP_129S1SvImJ_P0080051 Eno2 protein_coding protein_coding MGP_129S1SvImJ_T0080052.1 MGP_129S1SvImJ_G0031266.1 mouse_genomes_project 6 128070286 128073630 - MGP_129S1SvImJ_P0080052 Eno2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080053.1 MGP_129S1SvImJ_G0031266.1 mouse_genomes_project 6 128070367 128072477 - MGP_129S1SvImJ_P0080053 Eno2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080054.1 MGP_129S1SvImJ_G0031266.1 mouse_genomes_project 6 128070430 128073696 - MGP_129S1SvImJ_P0080054 Eno2 protein_coding protein_coding MGP_129S1SvImJ_T0080055.1 MGP_129S1SvImJ_G0031266.1 mouse_genomes_project 6 128070915 128072483 - Eno2 protein_coding retained_intron MGP_129S1SvImJ_T0080056.1 MGP_129S1SvImJ_G0031266.1 mouse_genomes_project 6 128071093 128073662 - Eno2 protein_coding retained_intron MGP_129S1SvImJ_T0080057.1 MGP_129S1SvImJ_G0031266.1 mouse_genomes_project 6 128071853 128073632 - MGP_129S1SvImJ_P0080057 Eno2 protein_coding protein_coding MGP_129S1SvImJ_T0077110.1 MGP_129S1SvImJ_G0030607.1 mouse_genomes_project 6 38897353 38914642 + MGP_129S1SvImJ_P0077110 Wee2 protein_coding protein_coding MGP_129S1SvImJ_T0077111.1 MGP_129S1SvImJ_G0030607.1 mouse_genomes_project 6 38902558 38927152 + MGP_129S1SvImJ_P0077111 Wee2 protein_coding protein_coding MGP_129S1SvImJ_T0077112.1 MGP_129S1SvImJ_G0030607.1 mouse_genomes_project 6 38902632 38903850 + MGP_129S1SvImJ_P0077112 Wee2 protein_coding protein_coding MGP_129S1SvImJ_T0080288.1 MGP_129S1SvImJ_G0031309.1 mouse_genomes_project 6 130415931 130446759 + D6Wsu163e protein_coding retained_intron MGP_129S1SvImJ_T0080289.1 MGP_129S1SvImJ_G0031309.1 mouse_genomes_project 6 130415935 130454813 + MGP_129S1SvImJ_P0080289 D6Wsu163e protein_coding protein_coding MGP_129S1SvImJ_T0080290.1 MGP_129S1SvImJ_G0031309.1 mouse_genomes_project 6 130415940 130419974 + D6Wsu163e protein_coding retained_intron MGP_129S1SvImJ_T0080291.1 MGP_129S1SvImJ_G0031309.1 mouse_genomes_project 6 130415944 130424840 + D6Wsu163e protein_coding retained_intron MGP_129S1SvImJ_T0080292.1 MGP_129S1SvImJ_G0031309.1 mouse_genomes_project 6 130415998 130422163 + MGP_129S1SvImJ_P0080292 D6Wsu163e protein_coding protein_coding MGP_129S1SvImJ_T0080293.1 MGP_129S1SvImJ_G0031309.1 mouse_genomes_project 6 130429074 130433889 + D6Wsu163e protein_coding retained_intron MGP_129S1SvImJ_T0080294.1 MGP_129S1SvImJ_G0031309.1 mouse_genomes_project 6 130451511 130452706 + D6Wsu163e protein_coding retained_intron MGP_129S1SvImJ_T0008686.1 MGP_129S1SvImJ_G0007022.1 mouse_genomes_project 6 93026139 93036392 - 4930471M09Rik lincRNA lincRNA MGP_129S1SvImJ_T0008687.1 MGP_129S1SvImJ_G0007022.1 mouse_genomes_project 6 93034459 93036450 - 4930471M09Rik lincRNA lincRNA MGP_129S1SvImJ_T0078161.1 MGP_129S1SvImJ_G0030895.1 mouse_genomes_project 6 79201447 79204568 + MGP_129S1SvImJ_P0078161 Reg3a protein_coding protein_coding MGP_129S1SvImJ_T0102620.1 MGP_129S1SvImJ_G0040453.1 mouse_genomes_project 6 58001385 58002300 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002748.1 MGP_129S1SvImJ_G0002623.1 mouse_genomes_project 6 39541240 39541516 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0079934.1 MGP_129S1SvImJ_G0031233.1 mouse_genomes_project 6 125936597 125966342 + MGP_129S1SvImJ_P0079934 Foxj2 protein_coding protein_coding MGP_129S1SvImJ_T0079935.1 MGP_129S1SvImJ_G0031233.1 mouse_genomes_project 6 125937194 125966317 + MGP_129S1SvImJ_P0079935 Foxj2 protein_coding protein_coding MGP_129S1SvImJ_T0079936.1 MGP_129S1SvImJ_G0031233.1 mouse_genomes_project 6 125943429 125953286 + MGP_129S1SvImJ_P0079936 Foxj2 protein_coding protein_coding MGP_129S1SvImJ_T0015312.1 MGP_129S1SvImJ_G0013401.1 mouse_genomes_project 6 30612257 30612492 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015487.1 MGP_129S1SvImJ_G0013576.1 mouse_genomes_project 6 84885292 84886058 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008677.1 MGP_129S1SvImJ_G0007015.1 mouse_genomes_project 6 90659895 90664974 - lincRNA lincRNA MGP_129S1SvImJ_T0080534.1 MGP_129S1SvImJ_G0031396.1 mouse_genomes_project 6 137141156 137142107 - MGP_129S1SvImJ_P0080534 Tas2r109 protein_coding protein_coding MGP_129S1SvImJ_T0011654.1 MGP_129S1SvImJ_G0009770.1 mouse_genomes_project 6 28636836 28637066 + Gm27522 misc_RNA misc_RNA MGP_129S1SvImJ_T0077515.1 MGP_129S1SvImJ_G0030733.1 mouse_genomes_project 6 50617685 50647406 + MGP_129S1SvImJ_P0077515 Nfe2l3 protein_coding protein_coding MGP_129S1SvImJ_T0077516.1 MGP_129S1SvImJ_G0030733.1 mouse_genomes_project 6 50617764 50621945 + Nfe2l3 protein_coding processed_transcript MGP_129S1SvImJ_T0077517.1 MGP_129S1SvImJ_G0030733.1 mouse_genomes_project 6 50617764 50645514 + MGP_129S1SvImJ_P0077517 Nfe2l3 protein_coding protein_coding MGP_129S1SvImJ_T0101269.1 MGP_129S1SvImJ_G0039336.1 mouse_genomes_project 6 98992078 98992209 - Gm26175 snoRNA snoRNA MGP_129S1SvImJ_T0078177.1 MGP_129S1SvImJ_G0030901.1 mouse_genomes_project 6 82892405 82928577 + MGP_129S1SvImJ_P0078177 Gcfc2 protein_coding protein_coding MGP_129S1SvImJ_T0078178.1 MGP_129S1SvImJ_G0030901.1 mouse_genomes_project 6 82892409 82927918 + MGP_129S1SvImJ_P0078178 Gcfc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078179.1 MGP_129S1SvImJ_G0030901.1 mouse_genomes_project 6 82892416 82912950 + Gcfc2 protein_coding retained_intron MGP_129S1SvImJ_T0078180.1 MGP_129S1SvImJ_G0030901.1 mouse_genomes_project 6 82899445 82899898 + Gcfc2 protein_coding retained_intron MGP_129S1SvImJ_T0078181.1 MGP_129S1SvImJ_G0030901.1 mouse_genomes_project 6 82901599 82903027 + Gcfc2 protein_coding retained_intron MGP_129S1SvImJ_T0078182.1 MGP_129S1SvImJ_G0030901.1 mouse_genomes_project 6 82910084 82912455 + Gcfc2 protein_coding retained_intron MGP_129S1SvImJ_T0078183.1 MGP_129S1SvImJ_G0030901.1 mouse_genomes_project 6 82915233 82926722 + MGP_129S1SvImJ_P0078183 Gcfc2 protein_coding protein_coding MGP_129S1SvImJ_T0078184.1 MGP_129S1SvImJ_G0030901.1 mouse_genomes_project 6 82918410 82925609 + Gcfc2 protein_coding retained_intron MGP_129S1SvImJ_T0001983.1 MGP_129S1SvImJ_G0001896.1 mouse_genomes_project 6 43841706 43843919 + TEC TEC MGP_129S1SvImJ_T0077899.1 MGP_129S1SvImJ_G0030842.1 mouse_genomes_project 6 66864088 66988255 + MGP_129S1SvImJ_P0077899 Gng12 protein_coding protein_coding MGP_129S1SvImJ_T0077900.1 MGP_129S1SvImJ_G0030842.1 mouse_genomes_project 6 66864114 66984834 + MGP_129S1SvImJ_P0077900 Gng12 protein_coding protein_coding MGP_129S1SvImJ_T0077901.1 MGP_129S1SvImJ_G0030842.1 mouse_genomes_project 6 66864122 66985178 + MGP_129S1SvImJ_P0077901 Gng12 protein_coding protein_coding MGP_129S1SvImJ_T0077902.1 MGP_129S1SvImJ_G0030842.1 mouse_genomes_project 6 66864125 66985194 + MGP_129S1SvImJ_P0077902 Gng12 protein_coding protein_coding MGP_129S1SvImJ_T0077903.1 MGP_129S1SvImJ_G0030842.1 mouse_genomes_project 6 66864128 66984806 + MGP_129S1SvImJ_P0077903 Gng12 protein_coding protein_coding MGP_129S1SvImJ_T0077904.1 MGP_129S1SvImJ_G0030842.1 mouse_genomes_project 6 66864131 66985991 + MGP_129S1SvImJ_P0077904 Gng12 protein_coding protein_coding MGP_129S1SvImJ_T0077905.1 MGP_129S1SvImJ_G0030842.1 mouse_genomes_project 6 66864147 66984753 + MGP_129S1SvImJ_P0077905 Gng12 protein_coding protein_coding MGP_129S1SvImJ_T0077906.1 MGP_129S1SvImJ_G0030842.1 mouse_genomes_project 6 66864240 66985051 + MGP_129S1SvImJ_P0077906 Gng12 protein_coding protein_coding MGP_129S1SvImJ_T0077907.1 MGP_129S1SvImJ_G0030842.1 mouse_genomes_project 6 66864582 66984472 + MGP_129S1SvImJ_P0077907 Gng12 protein_coding protein_coding MGP_129S1SvImJ_T0079504.1 MGP_129S1SvImJ_G0031158.1 mouse_genomes_project 6 118497655 118573300 + MGP_129S1SvImJ_P0079504 Ift122 protein_coding protein_coding MGP_129S1SvImJ_T0079505.1 MGP_129S1SvImJ_G0031158.1 mouse_genomes_project 6 118497715 118573290 + MGP_129S1SvImJ_P0079505 Ift122 protein_coding protein_coding MGP_129S1SvImJ_T0079506.1 MGP_129S1SvImJ_G0031158.1 mouse_genomes_project 6 118497765 118573293 + MGP_129S1SvImJ_P0079506 Ift122 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079507.1 MGP_129S1SvImJ_G0031158.1 mouse_genomes_project 6 118497773 118500270 + Ift122 protein_coding retained_intron MGP_129S1SvImJ_T0079508.1 MGP_129S1SvImJ_G0031158.1 mouse_genomes_project 6 118497820 118572932 + MGP_129S1SvImJ_P0079508 Ift122 protein_coding protein_coding MGP_129S1SvImJ_T0079509.1 MGP_129S1SvImJ_G0031158.1 mouse_genomes_project 6 118497830 118522658 + Ift122 protein_coding processed_transcript MGP_129S1SvImJ_T0079510.1 MGP_129S1SvImJ_G0031158.1 mouse_genomes_project 6 118524627 118534655 + Ift122 protein_coding processed_transcript MGP_129S1SvImJ_T0079511.1 MGP_129S1SvImJ_G0031158.1 mouse_genomes_project 6 118533239 118534660 + Ift122 protein_coding processed_transcript MGP_129S1SvImJ_T0079512.1 MGP_129S1SvImJ_G0031158.1 mouse_genomes_project 6 118534439 118536132 + Ift122 protein_coding retained_intron MGP_129S1SvImJ_T0079513.1 MGP_129S1SvImJ_G0031158.1 mouse_genomes_project 6 118541194 118546834 + Ift122 protein_coding retained_intron MGP_129S1SvImJ_T0079514.1 MGP_129S1SvImJ_G0031158.1 mouse_genomes_project 6 118546324 118573294 + Ift122 protein_coding processed_transcript MGP_129S1SvImJ_T0079515.1 MGP_129S1SvImJ_G0031158.1 mouse_genomes_project 6 118549845 118573295 + Ift122 protein_coding retained_intron MGP_129S1SvImJ_T0000326.1 MGP_129S1SvImJ_G0000268.1 mouse_genomes_project 6 69254909 69255375 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0077124.1 MGP_129S1SvImJ_G0030612.1 mouse_genomes_project 6 38998182 38999124 - MGP_129S1SvImJ_P0077124 Olfr461 protein_coding protein_coding MGP_129S1SvImJ_T0015324.1 MGP_129S1SvImJ_G0013413.1 mouse_genomes_project 6 36701494 36701917 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001944.1 MGP_129S1SvImJ_G0001857.1 mouse_genomes_project 6 12792190 12794743 + TEC TEC MGP_129S1SvImJ_T0002713.1 MGP_129S1SvImJ_G0002593.1 mouse_genomes_project 6 39699074 39699528 + MGP_129S1SvImJ_P0002713 Trbv23 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002714.1 MGP_129S1SvImJ_G0002593.1 mouse_genomes_project 6 39699074 39699528 + MGP_129S1SvImJ_P0002714 Trbv23 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002758.1 MGP_129S1SvImJ_G0002633.1 mouse_genomes_project 6 39704684 39704957 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0008569.1 MGP_129S1SvImJ_G0006937.1 mouse_genomes_project 6 32746444 32748963 - Gm13861 lincRNA lincRNA MGP_129S1SvImJ_T0001933.1 MGP_129S1SvImJ_G0001846.1 mouse_genomes_project 6 1547443 1549300 + TEC TEC MGP_129S1SvImJ_T0000338.1 MGP_129S1SvImJ_G0000280.1 mouse_genomes_project 6 70180164 70180614 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0008713.1 MGP_129S1SvImJ_G0007043.1 mouse_genomes_project 6 115417143 115419437 + Gm44081 lincRNA lincRNA MGP_129S1SvImJ_T0100035.1 MGP_129S1SvImJ_G0038102.1 mouse_genomes_project 6 140827778 140827863 + Gm25882 snRNA snRNA MGP_129S1SvImJ_T0102626.1 MGP_129S1SvImJ_G0040459.1 mouse_genomes_project 6 66719925 66720825 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0100012.1 MGP_129S1SvImJ_G0038079.1 mouse_genomes_project 6 98290728 98290825 - Gm22971 snRNA snRNA MGP_129S1SvImJ_T0008510.1 MGP_129S1SvImJ_G0006896.1 mouse_genomes_project 6 3519350 3598036 - Gm20618 lincRNA lincRNA MGP_129S1SvImJ_T0008511.1 MGP_129S1SvImJ_G0006896.1 mouse_genomes_project 6 3547708 3609155 - Gm20618 lincRNA lincRNA MGP_129S1SvImJ_T0001951.1 MGP_129S1SvImJ_G0001864.1 mouse_genomes_project 6 15734351 15735985 - TEC TEC MGP_129S1SvImJ_T0002587.1 MGP_129S1SvImJ_G0002489.1 mouse_genomes_project 6 40042271 40042322 + MGP_129S1SvImJ_P0002587 Trbj1-4 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0002011.1 MGP_129S1SvImJ_G0001924.1 mouse_genomes_project 6 52991912 52995578 + TEC TEC MGP_129S1SvImJ_T0077126.1 MGP_129S1SvImJ_G0030614.1 mouse_genomes_project 6 39018229 39029047 - MGP_129S1SvImJ_P0077126 Clec5a protein_coding protein_coding MGP_129S1SvImJ_T0077127.1 MGP_129S1SvImJ_G0030614.1 mouse_genomes_project 6 39020052 39029065 - Clec5a protein_coding processed_transcript MGP_129S1SvImJ_T0077128.1 MGP_129S1SvImJ_G0030614.1 mouse_genomes_project 6 39021185 39029039 - MGP_129S1SvImJ_P0077128 Clec5a protein_coding protein_coding MGP_129S1SvImJ_T0077129.1 MGP_129S1SvImJ_G0030614.1 mouse_genomes_project 6 39021295 39029034 - MGP_129S1SvImJ_P0077129 Clec5a protein_coding protein_coding MGP_129S1SvImJ_T0077443.1 MGP_129S1SvImJ_G0030715.1 mouse_genomes_project 6 47843614 47883923 + MGP_129S1SvImJ_P0077443 Aoc1 protein_coding protein_coding MGP_129S1SvImJ_T0077444.1 MGP_129S1SvImJ_G0030715.1 mouse_genomes_project 6 47867199 47887235 + MGP_129S1SvImJ_P0077444 Aoc1 protein_coding protein_coding MGP_129S1SvImJ_T0077445.1 MGP_129S1SvImJ_G0030715.1 mouse_genomes_project 6 47883032 47887234 + MGP_129S1SvImJ_P0077445 Aoc1 protein_coding protein_coding MGP_129S1SvImJ_T0077446.1 MGP_129S1SvImJ_G0030715.1 mouse_genomes_project 6 47883032 47887234 + MGP_129S1SvImJ_P0077446 Aoc1 protein_coding protein_coding MGP_129S1SvImJ_T0077447.1 MGP_129S1SvImJ_G0030715.1 mouse_genomes_project 6 47885401 47886698 + Aoc1 protein_coding retained_intron MGP_129S1SvImJ_T0015434.1 MGP_129S1SvImJ_G0013523.1 mouse_genomes_project 6 67654389 67654563 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077743.1 MGP_129S1SvImJ_G0030784.1 mouse_genomes_project 6 56388628 56393023 + Vmn1r4 protein_coding retained_intron MGP_129S1SvImJ_T0077744.1 MGP_129S1SvImJ_G0030784.1 mouse_genomes_project 6 56388635 56423805 + MGP_129S1SvImJ_P0077744 Vmn1r4 protein_coding protein_coding MGP_129S1SvImJ_T0077745.1 MGP_129S1SvImJ_G0030784.1 mouse_genomes_project 6 56421027 56422061 + MGP_129S1SvImJ_P0077745 Vmn1r4 protein_coding protein_coding MGP_129S1SvImJ_T0000350.1 MGP_129S1SvImJ_G0000292.1 mouse_genomes_project 6 71051386 71052004 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0000234.1 MGP_129S1SvImJ_G0000180.1 mouse_genomes_project 6 70928496 70929096 + MGP_129S1SvImJ_P0000234 Igkv3-12 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0008796.1 MGP_129S1SvImJ_G0007104.1 mouse_genomes_project 6 153700993 153708478 - Gm6313 lincRNA lincRNA MGP_129S1SvImJ_T0008797.1 MGP_129S1SvImJ_G0007104.1 mouse_genomes_project 6 153700993 153703941 - Gm6313 lincRNA lincRNA MGP_129S1SvImJ_T0077949.1 MGP_129S1SvImJ_G0030853.1 mouse_genomes_project 6 71659566 71664767 + MGP_129S1SvImJ_P0077949 Fabp1 protein_coding protein_coding MGP_129S1SvImJ_T0078982.1 MGP_129S1SvImJ_G0031058.1 mouse_genomes_project 6 93881781 93884368 - MGP_129S1SvImJ_P0078982 Trh protein_coding protein_coding MGP_129S1SvImJ_T0002068.1 MGP_129S1SvImJ_G0001981.1 mouse_genomes_project 6 87293829 87295629 + TEC TEC MGP_129S1SvImJ_T0077246.1 MGP_129S1SvImJ_G0030660.1 mouse_genomes_project 6 41277850 41278804 + MGP_129S1SvImJ_P0077246 Olfr453 protein_coding protein_coding MGP_129S1SvImJ_T0015252.1 MGP_129S1SvImJ_G0013341.1 mouse_genomes_project 6 1135652 1135974 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076560.1 MGP_129S1SvImJ_G0030510.1 mouse_genomes_project 6 26170235 26177122 - MGP_129S1SvImJ_P0076560 Pax4 protein_coding protein_coding MGP_129S1SvImJ_T0076561.1 MGP_129S1SvImJ_G0030510.1 mouse_genomes_project 6 26170235 26177224 - MGP_129S1SvImJ_P0076561 Pax4 protein_coding protein_coding MGP_129S1SvImJ_T0076562.1 MGP_129S1SvImJ_G0030510.1 mouse_genomes_project 6 26170240 26177122 - MGP_129S1SvImJ_P0076562 Pax4 protein_coding protein_coding MGP_129S1SvImJ_T0076563.1 MGP_129S1SvImJ_G0030510.1 mouse_genomes_project 6 26170276 26175054 - MGP_129S1SvImJ_P0076563 Pax4 protein_coding protein_coding MGP_129S1SvImJ_T0076564.1 MGP_129S1SvImJ_G0030510.1 mouse_genomes_project 6 26171759 26174251 - Pax4 protein_coding retained_intron MGP_129S1SvImJ_T0076565.1 MGP_129S1SvImJ_G0030510.1 mouse_genomes_project 6 26172650 26175054 - Pax4 protein_coding retained_intron MGP_129S1SvImJ_T0002214.1 MGP_129S1SvImJ_G0002126.1 mouse_genomes_project 6 154412139 154415579 - TEC TEC MGP_129S1SvImJ_T0001974.1 MGP_129S1SvImJ_G0001887.1 mouse_genomes_project 6 37480563 37481780 - TEC TEC MGP_129S1SvImJ_T0080420.1 MGP_129S1SvImJ_G0031341.1 mouse_genomes_project 6 132835554 132844328 + MGP_129S1SvImJ_P0080420 Clec2d protein_coding protein_coding MGP_129S1SvImJ_T0015388.1 MGP_129S1SvImJ_G0013477.1 mouse_genomes_project 6 60215772 60215954 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001959.1 MGP_129S1SvImJ_G0001872.1 mouse_genomes_project 6 25939840 25947806 - TEC TEC MGP_129S1SvImJ_T0008573.1 MGP_129S1SvImJ_G0006939.1 mouse_genomes_project 6 33481469 33487443 + 1700065J11Rik lincRNA lincRNA MGP_129S1SvImJ_T0015604.1 MGP_129S1SvImJ_G0013693.1 mouse_genomes_project 6 127134173 127135020 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077263.1 MGP_129S1SvImJ_G0030672.1 mouse_genomes_project 6 41773087 41774141 + MGP_129S1SvImJ_P0077263 Olfr13 protein_coding protein_coding MGP_129S1SvImJ_T0098617.1 MGP_129S1SvImJ_G0036702.1 mouse_genomes_project 6 28223482 28223578 - Gm25625 rRNA rRNA MGP_129S1SvImJ_T0015648.1 MGP_129S1SvImJ_G0013737.1 mouse_genomes_project 6 136467101 136467318 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077182.1 MGP_129S1SvImJ_G0030643.1 mouse_genomes_project 6 40748195 40752702 + MGP_129S1SvImJ_P0077182 Gstk1 protein_coding protein_coding MGP_129S1SvImJ_T0077183.1 MGP_129S1SvImJ_G0030643.1 mouse_genomes_project 6 40748239 40752702 + MGP_129S1SvImJ_P0077183 Gstk1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077184.1 MGP_129S1SvImJ_G0030643.1 mouse_genomes_project 6 40748249 40752708 + Gstk1 protein_coding retained_intron MGP_129S1SvImJ_T0077185.1 MGP_129S1SvImJ_G0030643.1 mouse_genomes_project 6 40748283 40752580 + Gstk1 protein_coding processed_transcript MGP_129S1SvImJ_T0100017.1 MGP_129S1SvImJ_G0038084.1 mouse_genomes_project 6 105956042 105956108 - Gm25656 snRNA snRNA MGP_129S1SvImJ_T0005124.1 MGP_129S1SvImJ_G0004374.1 mouse_genomes_project 6 139033479 139034426 + Gm44025 antisense antisense MGP_129S1SvImJ_T0015298.1 MGP_129S1SvImJ_G0013387.1 mouse_genomes_project 6 20209936 20212971 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098625.1 MGP_129S1SvImJ_G0036710.1 mouse_genomes_project 6 136659990 136660111 + n-R5s166 rRNA rRNA MGP_129S1SvImJ_T0008537.1 MGP_129S1SvImJ_G0006915.1 mouse_genomes_project 6 27825696 27833401 + Smkr-ps lincRNA lincRNA MGP_129S1SvImJ_T0008538.1 MGP_129S1SvImJ_G0006915.1 mouse_genomes_project 6 27825698 27833654 + Smkr-ps lincRNA lincRNA MGP_129S1SvImJ_T0076326.1 MGP_129S1SvImJ_G0030462.1 mouse_genomes_project 6 10962273 10966057 - MGP_129S1SvImJ_P0076326 2610001J05Rik protein_coding protein_coding MGP_129S1SvImJ_T0076327.1 MGP_129S1SvImJ_G0030462.1 mouse_genomes_project 6 10964338 10966005 - MGP_129S1SvImJ_P0076327 2610001J05Rik protein_coding protein_coding MGP_129S1SvImJ_T0076328.1 MGP_129S1SvImJ_G0030462.1 mouse_genomes_project 6 10964398 10966004 - MGP_129S1SvImJ_P0076328 2610001J05Rik protein_coding protein_coding MGP_129S1SvImJ_T0076329.1 MGP_129S1SvImJ_G0030462.1 mouse_genomes_project 6 10964539 10966004 - MGP_129S1SvImJ_P0076329 2610001J05Rik protein_coding protein_coding MGP_129S1SvImJ_T0002096.1 MGP_129S1SvImJ_G0002009.1 mouse_genomes_project 6 90335532 90338462 + TEC TEC MGP_129S1SvImJ_T0000349.1 MGP_129S1SvImJ_G0000291.1 mouse_genomes_project 6 70956855 70957430 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0015306.1 MGP_129S1SvImJ_G0013395.1 mouse_genomes_project 6 24499033 24499775 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000194.1 MGP_129S1SvImJ_G0000149.1 mouse_genomes_project 6 70006795 70007308 - MGP_129S1SvImJ_P0000194 Igkv4-72 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0004961.1 MGP_129S1SvImJ_G0004261.1 mouse_genomes_project 6 39419503 39419801 + Gm29588 antisense antisense MGP_129S1SvImJ_T0010771.1 MGP_129S1SvImJ_G0008887.1 mouse_genomes_project 6 27189286 27189429 - Gm44354 miRNA miRNA MGP_129S1SvImJ_T0001998.1 MGP_129S1SvImJ_G0001911.1 mouse_genomes_project 6 44846359 44849739 + TEC TEC MGP_129S1SvImJ_T0078445.1 MGP_129S1SvImJ_G0030950.1 mouse_genomes_project 6 86353829 86484494 - MGP_129S1SvImJ_P0078445 Sfxn5 protein_coding protein_coding MGP_129S1SvImJ_T0078446.1 MGP_129S1SvImJ_G0030950.1 mouse_genomes_project 6 86370075 86405645 - Sfxn5 protein_coding processed_transcript MGP_129S1SvImJ_T0078447.1 MGP_129S1SvImJ_G0030950.1 mouse_genomes_project 6 86375147 86484491 - MGP_129S1SvImJ_P0078447 Sfxn5 protein_coding protein_coding MGP_129S1SvImJ_T0078448.1 MGP_129S1SvImJ_G0030950.1 mouse_genomes_project 6 86409425 86484478 - Sfxn5 protein_coding retained_intron MGP_129S1SvImJ_T0078449.1 MGP_129S1SvImJ_G0030950.1 mouse_genomes_project 6 86438336 86484491 - Sfxn5 protein_coding processed_transcript MGP_129S1SvImJ_T0078450.1 MGP_129S1SvImJ_G0030950.1 mouse_genomes_project 6 86442016 86484494 - MGP_129S1SvImJ_P0078450 Sfxn5 protein_coding protein_coding MGP_129S1SvImJ_T0078451.1 MGP_129S1SvImJ_G0030950.1 mouse_genomes_project 6 86442018 86469780 - Sfxn5 protein_coding processed_transcript MGP_129S1SvImJ_T0078452.1 MGP_129S1SvImJ_G0030950.1 mouse_genomes_project 6 86468253 86483822 - MGP_129S1SvImJ_P0078452 Sfxn5 protein_coding protein_coding MGP_129S1SvImJ_T0078453.1 MGP_129S1SvImJ_G0030950.1 mouse_genomes_project 6 86480023 86484494 - Sfxn5 protein_coding retained_intron MGP_129S1SvImJ_T0080488.1 MGP_129S1SvImJ_G0031365.1 mouse_genomes_project 6 135147742 135175478 - MGP_129S1SvImJ_P0080488 Klra2 protein_coding protein_coding MGP_129S1SvImJ_T0010766.1 MGP_129S1SvImJ_G0008882.1 mouse_genomes_project 6 20275924 20276021 - Gm23961 miRNA miRNA MGP_129S1SvImJ_T0008682.1 MGP_129S1SvImJ_G0007018.1 mouse_genomes_project 6 91992069 91993827 - Gm44117 lincRNA lincRNA MGP_129S1SvImJ_T0078076.1 MGP_129S1SvImJ_G0030877.1 mouse_genomes_project 6 72984416 72992921 - MGP_129S1SvImJ_P0078076 Mat2a protein_coding protein_coding MGP_129S1SvImJ_T0078077.1 MGP_129S1SvImJ_G0030877.1 mouse_genomes_project 6 72987907 72992919 - MGP_129S1SvImJ_P0078077 Mat2a protein_coding protein_coding MGP_129S1SvImJ_T0078078.1 MGP_129S1SvImJ_G0030877.1 mouse_genomes_project 6 72989173 72992751 - MGP_129S1SvImJ_P0078078 Mat2a protein_coding protein_coding MGP_129S1SvImJ_T0078079.1 MGP_129S1SvImJ_G0030877.1 mouse_genomes_project 6 72989779 72992903 - Mat2a protein_coding retained_intron MGP_129S1SvImJ_T0078080.1 MGP_129S1SvImJ_G0030877.1 mouse_genomes_project 6 72990110 72992906 - Mat2a protein_coding retained_intron MGP_129S1SvImJ_T0078081.1 MGP_129S1SvImJ_G0030877.1 mouse_genomes_project 6 72990762 72992911 - Mat2a protein_coding processed_transcript MGP_129S1SvImJ_T0078082.1 MGP_129S1SvImJ_G0030877.1 mouse_genomes_project 6 72992164 72992919 - Mat2a protein_coding retained_intron MGP_129S1SvImJ_T0015549.1 MGP_129S1SvImJ_G0013638.1 mouse_genomes_project 6 111424963 111425441 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077933.1 MGP_129S1SvImJ_G0030846.1 mouse_genomes_project 6 67423946 67506270 - MGP_129S1SvImJ_P0077933 Il23r protein_coding protein_coding MGP_129S1SvImJ_T0102653.1 MGP_129S1SvImJ_G0040486.1 mouse_genomes_project 6 136892469 136893461 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0008568.1 MGP_129S1SvImJ_G0006936.1 mouse_genomes_project 6 32624020 32632416 + Gm13860 lincRNA lincRNA MGP_129S1SvImJ_T0077935.1 MGP_129S1SvImJ_G0030848.1 mouse_genomes_project 6 71183117 71217102 - MGP_129S1SvImJ_P0077935 Rpia protein_coding protein_coding MGP_129S1SvImJ_T0077936.1 MGP_129S1SvImJ_G0030848.1 mouse_genomes_project 6 71203964 71216873 - Rpia protein_coding retained_intron MGP_129S1SvImJ_T0008553.1 MGP_129S1SvImJ_G0006925.1 mouse_genomes_project 6 29286337 29297284 + Gm13844 lincRNA lincRNA MGP_129S1SvImJ_T0000155.1 MGP_129S1SvImJ_G0000118.1 mouse_genomes_project 6 68128873 68130145 + MGP_129S1SvImJ_P0000155 Igkv1-117 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0005136.1 MGP_129S1SvImJ_G0004384.1 mouse_genomes_project 6 147414874 147426730 + 5330439B14Rik antisense antisense MGP_129S1SvImJ_T0078113.1 MGP_129S1SvImJ_G0030883.1 mouse_genomes_project 6 73198348 73375802 - MGP_129S1SvImJ_P0078113 Tcf7l1 protein_coding protein_coding MGP_129S1SvImJ_T0078114.1 MGP_129S1SvImJ_G0030883.1 mouse_genomes_project 6 73199242 73375500 - MGP_129S1SvImJ_P0078114 Tcf7l1 protein_coding protein_coding MGP_129S1SvImJ_T0078115.1 MGP_129S1SvImJ_G0030883.1 mouse_genomes_project 6 73199561 73202241 - Tcf7l1 protein_coding processed_transcript MGP_129S1SvImJ_T0078116.1 MGP_129S1SvImJ_G0030883.1 mouse_genomes_project 6 73206105 73375146 - MGP_129S1SvImJ_P0078116 Tcf7l1 protein_coding protein_coding MGP_129S1SvImJ_T0078117.1 MGP_129S1SvImJ_G0030883.1 mouse_genomes_project 6 73226282 73248890 - Tcf7l1 protein_coding processed_transcript MGP_129S1SvImJ_T0077144.1 MGP_129S1SvImJ_G0030622.1 mouse_genomes_project 6 39785865 39860115 + MGP_129S1SvImJ_P0077144 protein_coding protein_coding MGP_129S1SvImJ_T0002131.1 MGP_129S1SvImJ_G0002044.1 mouse_genomes_project 6 104000835 104003502 + TEC TEC MGP_129S1SvImJ_T0077060.1 MGP_129S1SvImJ_G0030596.1 mouse_genomes_project 6 37754723 37765795 + MGP_129S1SvImJ_P0077060 Rab19 protein_coding protein_coding MGP_129S1SvImJ_T0015667.1 MGP_129S1SvImJ_G0013756.1 mouse_genomes_project 6 144731631 144732045 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077785.1 MGP_129S1SvImJ_G0030810.1 mouse_genomes_project 6 57523763 57524816 - MGP_129S1SvImJ_P0077785 Vmn1r25 protein_coding protein_coding MGP_129S1SvImJ_T0015384.1 MGP_129S1SvImJ_G0013473.1 mouse_genomes_project 6 58407166 58407412 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008636.1 MGP_129S1SvImJ_G0006983.1 mouse_genomes_project 6 71761218 71770324 + Gm1070 lincRNA lincRNA MGP_129S1SvImJ_T0077074.1 MGP_129S1SvImJ_G0030599.1 mouse_genomes_project 6 37977167 37991917 + MGP_129S1SvImJ_P0077074 Adck2 protein_coding protein_coding MGP_129S1SvImJ_T0077075.1 MGP_129S1SvImJ_G0030599.1 mouse_genomes_project 6 37977253 37987210 + MGP_129S1SvImJ_P0077075 Adck2 protein_coding protein_coding MGP_129S1SvImJ_T0077076.1 MGP_129S1SvImJ_G0030599.1 mouse_genomes_project 6 37977258 37990900 + MGP_129S1SvImJ_P0077076 Adck2 protein_coding protein_coding MGP_129S1SvImJ_T0077077.1 MGP_129S1SvImJ_G0030599.1 mouse_genomes_project 6 37978278 37983244 + Adck2 protein_coding retained_intron MGP_129S1SvImJ_T0077078.1 MGP_129S1SvImJ_G0030599.1 mouse_genomes_project 6 37978327 37991916 + MGP_129S1SvImJ_P0077078 Adck2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0077079.1 MGP_129S1SvImJ_G0030599.1 mouse_genomes_project 6 37979666 37985286 + MGP_129S1SvImJ_P0077079 Adck2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077080.1 MGP_129S1SvImJ_G0030599.1 mouse_genomes_project 6 37987092 37989086 + Adck2 protein_coding retained_intron MGP_129S1SvImJ_T0078679.1 MGP_129S1SvImJ_G0031000.1 mouse_genomes_project 6 89182235 89211426 - MGP_129S1SvImJ_P0078679 Isy1 protein_coding protein_coding MGP_129S1SvImJ_T0078680.1 MGP_129S1SvImJ_G0031000.1 mouse_genomes_project 6 89191790 89211366 - MGP_129S1SvImJ_P0078680 Isy1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078681.1 MGP_129S1SvImJ_G0031000.1 mouse_genomes_project 6 89191860 89192837 - Isy1 protein_coding retained_intron MGP_129S1SvImJ_T0078682.1 MGP_129S1SvImJ_G0031000.1 mouse_genomes_project 6 89192674 89211328 - MGP_129S1SvImJ_P0078682 Isy1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078683.1 MGP_129S1SvImJ_G0031000.1 mouse_genomes_project 6 89195538 89211384 - Isy1 protein_coding retained_intron MGP_129S1SvImJ_T0078684.1 MGP_129S1SvImJ_G0031000.1 mouse_genomes_project 6 89197317 89211341 - Isy1 protein_coding retained_intron MGP_129S1SvImJ_T0078685.1 MGP_129S1SvImJ_G0031000.1 mouse_genomes_project 6 89197922 89211375 - MGP_129S1SvImJ_P0078685 Isy1 protein_coding protein_coding MGP_129S1SvImJ_T0078686.1 MGP_129S1SvImJ_G0031000.1 mouse_genomes_project 6 89204786 89211384 - Isy1 protein_coding retained_intron MGP_129S1SvImJ_T0080972.1 MGP_129S1SvImJ_G0031483.1 mouse_genomes_project 6 150890809 150898113 - MGP_129S1SvImJ_P0080972 Bhlhe41 protein_coding protein_coding MGP_129S1SvImJ_T0080973.1 MGP_129S1SvImJ_G0031483.1 mouse_genomes_project 6 150896059 150897857 - MGP_129S1SvImJ_P0080973 Bhlhe41 protein_coding protein_coding MGP_129S1SvImJ_T0080974.1 MGP_129S1SvImJ_G0031483.1 mouse_genomes_project 6 150897217 150897907 - Bhlhe41 protein_coding retained_intron MGP_129S1SvImJ_T0081047.1 MGP_129S1SvImJ_G0031495.1 mouse_genomes_project 6 152070363 152073162 + MGP_129S1SvImJ_P0081047 Rep15 protein_coding protein_coding MGP_129S1SvImJ_T0015414.1 MGP_129S1SvImJ_G0013503.1 mouse_genomes_project 6 65824090 65824655 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101960.1 MGP_129S1SvImJ_G0039843.1 mouse_genomes_project 6 137772560 137776131 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101961.1 MGP_129S1SvImJ_G0039843.1 mouse_genomes_project 6 137772593 137774860 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0000304.1 MGP_129S1SvImJ_G0000246.1 mouse_genomes_project 6 68270516 68271969 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0101747.1 MGP_129S1SvImJ_G0039738.1 mouse_genomes_project 6 66206383 66230182 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101748.1 MGP_129S1SvImJ_G0039738.1 mouse_genomes_project 6 66216386 66231288 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101749.1 MGP_129S1SvImJ_G0039738.1 mouse_genomes_project 6 66229949 66230682 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0078154.1 MGP_129S1SvImJ_G0030893.1 mouse_genomes_project 6 79191458 79193700 + MGP_129S1SvImJ_P0078154 Reg3b protein_coding protein_coding MGP_129S1SvImJ_T0078155.1 MGP_129S1SvImJ_G0030893.1 mouse_genomes_project 6 79191662 79194268 + MGP_129S1SvImJ_P0078155 Reg3b protein_coding protein_coding MGP_129S1SvImJ_T0078156.1 MGP_129S1SvImJ_G0030893.1 mouse_genomes_project 6 79191699 79193710 + MGP_129S1SvImJ_P0078156 Reg3b protein_coding protein_coding MGP_129S1SvImJ_T0078157.1 MGP_129S1SvImJ_G0030893.1 mouse_genomes_project 6 79193332 79194220 + Reg3b protein_coding retained_intron MGP_129S1SvImJ_T0015255.1 MGP_129S1SvImJ_G0013344.1 mouse_genomes_project 6 3229651 3229884 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079954.1 MGP_129S1SvImJ_G0031241.1 mouse_genomes_project 6 126314161 126351942 + MGP_129S1SvImJ_P0079954 Clec4b2 protein_coding protein_coding MGP_129S1SvImJ_T0077558.1 MGP_129S1SvImJ_G0030743.1 mouse_genomes_project 6 51428439 51430498 - MGP_129S1SvImJ_P0077558 Hoxa4 protein_coding protein_coding MGP_129S1SvImJ_T0078603.1 MGP_129S1SvImJ_G0030983.1 mouse_genomes_project 6 88047776 88080407 - MGP_129S1SvImJ_P0078603 Anxa4 protein_coding protein_coding MGP_129S1SvImJ_T0078604.1 MGP_129S1SvImJ_G0030983.1 mouse_genomes_project 6 88047777 88113968 - MGP_129S1SvImJ_P0078604 Anxa4 protein_coding protein_coding MGP_129S1SvImJ_T0078605.1 MGP_129S1SvImJ_G0030983.1 mouse_genomes_project 6 88047783 88080321 - MGP_129S1SvImJ_P0078605 Anxa4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078606.1 MGP_129S1SvImJ_G0030983.1 mouse_genomes_project 6 88048591 88056058 - Anxa4 protein_coding retained_intron MGP_129S1SvImJ_T0078607.1 MGP_129S1SvImJ_G0030983.1 mouse_genomes_project 6 88048662 88073313 - MGP_129S1SvImJ_P0078607 Anxa4 protein_coding protein_coding MGP_129S1SvImJ_T0078608.1 MGP_129S1SvImJ_G0030983.1 mouse_genomes_project 6 88052897 88080304 - MGP_129S1SvImJ_P0078608 Anxa4 protein_coding protein_coding MGP_129S1SvImJ_T0078609.1 MGP_129S1SvImJ_G0030983.1 mouse_genomes_project 6 88052904 88113948 - MGP_129S1SvImJ_P0078609 Anxa4 protein_coding protein_coding MGP_129S1SvImJ_T0078610.1 MGP_129S1SvImJ_G0030983.1 mouse_genomes_project 6 88054129 88113948 - MGP_129S1SvImJ_P0078610 Anxa4 protein_coding protein_coding MGP_129S1SvImJ_T0078611.1 MGP_129S1SvImJ_G0030983.1 mouse_genomes_project 6 88060181 88080407 - Anxa4 protein_coding retained_intron MGP_129S1SvImJ_T0101821.1 MGP_129S1SvImJ_G0039782.1 mouse_genomes_project 6 47449256 47480733 + transcribed_unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0101822.1 MGP_129S1SvImJ_G0039782.1 mouse_genomes_project 6 47453049 47476341 + transcribed_unitary_pseudogene transcribed_unitary_pseudogene MGP_129S1SvImJ_T0101823.1 MGP_129S1SvImJ_G0039782.1 mouse_genomes_project 6 47457167 47478405 + transcribed_unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0101824.1 MGP_129S1SvImJ_G0039782.1 mouse_genomes_project 6 47457224 47474415 + transcribed_unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0011666.1 MGP_129S1SvImJ_G0009782.1 mouse_genomes_project 6 51488752 51488843 + Gm27695 misc_RNA misc_RNA MGP_129S1SvImJ_T0001932.1 MGP_129S1SvImJ_G0001845.1 mouse_genomes_project 6 1372746 1373683 + TEC TEC MGP_129S1SvImJ_T0004967.1 MGP_129S1SvImJ_G0004266.1 mouse_genomes_project 6 47565325 47573710 - Gm44119 antisense antisense MGP_129S1SvImJ_T0008588.1 MGP_129S1SvImJ_G0006945.1 mouse_genomes_project 6 42717261 42720108 - Gm35216 lincRNA lincRNA MGP_129S1SvImJ_T0079174.1 MGP_129S1SvImJ_G0031097.1 mouse_genomes_project 6 109784389 109824758 + MGP_129S1SvImJ_P0079174 Lrrn1 protein_coding protein_coding MGP_129S1SvImJ_T0077758.1 MGP_129S1SvImJ_G0030797.1 mouse_genomes_project 6 56889812 56890899 - MGP_129S1SvImJ_P0077758 Vmn1r18 protein_coding protein_coding MGP_129S1SvImJ_T0099985.1 MGP_129S1SvImJ_G0038052.1 mouse_genomes_project 6 18554084 18554187 + Gm26373 snRNA snRNA MGP_129S1SvImJ_T0101230.1 MGP_129S1SvImJ_G0039297.1 mouse_genomes_project 6 18430673 18430804 - Gm23960 snoRNA snoRNA MGP_129S1SvImJ_T0008520.1 MGP_129S1SvImJ_G0006902.1 mouse_genomes_project 6 9640821 9686581 + lincRNA lincRNA MGP_129S1SvImJ_T0008707.1 MGP_129S1SvImJ_G0007037.1 mouse_genomes_project 6 107664907 107668745 - lincRNA lincRNA MGP_129S1SvImJ_T0080531.1 MGP_129S1SvImJ_G0031393.1 mouse_genomes_project 6 137069507 137070444 + MGP_129S1SvImJ_P0080531 Tas2r125 protein_coding protein_coding MGP_129S1SvImJ_T0015352.1 MGP_129S1SvImJ_G0013441.1 mouse_genomes_project 6 47618474 47618932 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076414.1 MGP_129S1SvImJ_G0030473.1 mouse_genomes_project 6 15268111 15311830 - MGP_129S1SvImJ_P0076414 Wnt2 protein_coding protein_coding MGP_129S1SvImJ_T0101950.1 MGP_129S1SvImJ_G0039836.1 mouse_genomes_project 6 132649440 132664320 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101951.1 MGP_129S1SvImJ_G0039836.1 mouse_genomes_project 6 132649528 132664241 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0080672.1 MGP_129S1SvImJ_G0031430.1 mouse_genomes_project 6 141376510 141379923 - MGP_129S1SvImJ_P0080672 Mgp protein_coding protein_coding MGP_129S1SvImJ_T0080673.1 MGP_129S1SvImJ_G0031430.1 mouse_genomes_project 6 141377786 141379881 - Mgp protein_coding retained_intron MGP_129S1SvImJ_T0079217.1 MGP_129S1SvImJ_G0031109.1 mouse_genomes_project 6 115078773 115156591 - MGP_129S1SvImJ_P0079217 Rad18 protein_coding protein_coding MGP_129S1SvImJ_T0079218.1 MGP_129S1SvImJ_G0031109.1 mouse_genomes_project 6 115078868 115156509 - MGP_129S1SvImJ_P0079218 Rad18 protein_coding protein_coding MGP_129S1SvImJ_T0079219.1 MGP_129S1SvImJ_G0031109.1 mouse_genomes_project 6 115078896 115156516 - MGP_129S1SvImJ_P0079219 Rad18 protein_coding protein_coding MGP_129S1SvImJ_T0079220.1 MGP_129S1SvImJ_G0031109.1 mouse_genomes_project 6 115078898 115156575 - MGP_129S1SvImJ_P0079220 Rad18 protein_coding protein_coding MGP_129S1SvImJ_T0079221.1 MGP_129S1SvImJ_G0031109.1 mouse_genomes_project 6 115079754 115133318 - MGP_129S1SvImJ_P0079221 Rad18 protein_coding protein_coding MGP_129S1SvImJ_T0079222.1 MGP_129S1SvImJ_G0031109.1 mouse_genomes_project 6 115085706 115156553 - Rad18 protein_coding processed_transcript MGP_129S1SvImJ_T0079223.1 MGP_129S1SvImJ_G0031109.1 mouse_genomes_project 6 115103789 115156538 - MGP_129S1SvImJ_P0079223 Rad18 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079224.1 MGP_129S1SvImJ_G0031109.1 mouse_genomes_project 6 115116826 115156549 - Rad18 protein_coding retained_intron MGP_129S1SvImJ_T0076865.1 MGP_129S1SvImJ_G0030560.1 mouse_genomes_project 6 32558785 32590406 + MGP_129S1SvImJ_P0076865 Bpgm protein_coding protein_coding MGP_129S1SvImJ_T0076866.1 MGP_129S1SvImJ_G0030560.1 mouse_genomes_project 6 32558934 32571685 + Bpgm protein_coding retained_intron MGP_129S1SvImJ_T0076867.1 MGP_129S1SvImJ_G0030560.1 mouse_genomes_project 6 32559030 32570289 + MGP_129S1SvImJ_P0076867 Bpgm protein_coding protein_coding MGP_129S1SvImJ_T0076868.1 MGP_129S1SvImJ_G0030560.1 mouse_genomes_project 6 32559057 32570349 + MGP_129S1SvImJ_P0076868 Bpgm protein_coding protein_coding MGP_129S1SvImJ_T0076869.1 MGP_129S1SvImJ_G0030560.1 mouse_genomes_project 6 32559720 32570450 + MGP_129S1SvImJ_P0076869 Bpgm protein_coding protein_coding MGP_129S1SvImJ_T0002006.1 MGP_129S1SvImJ_G0001919.1 mouse_genomes_project 6 51499784 51501027 - TEC TEC MGP_129S1SvImJ_T0078118.1 MGP_129S1SvImJ_G0030884.1 mouse_genomes_project 6 73438390 73501283 - MGP_129S1SvImJ_P0078118 Kcmf1 protein_coding protein_coding MGP_129S1SvImJ_T0078119.1 MGP_129S1SvImJ_G0030884.1 mouse_genomes_project 6 73438506 73501357 - MGP_129S1SvImJ_P0078119 Kcmf1 protein_coding protein_coding MGP_129S1SvImJ_T0078120.1 MGP_129S1SvImJ_G0030884.1 mouse_genomes_project 6 73443046 73446090 - Kcmf1 protein_coding retained_intron MGP_129S1SvImJ_T0078121.1 MGP_129S1SvImJ_G0030884.1 mouse_genomes_project 6 73444912 73455497 - Kcmf1 protein_coding processed_transcript MGP_129S1SvImJ_T0078846.1 MGP_129S1SvImJ_G0031031.1 mouse_genomes_project 6 91736981 91738103 - MGP_129S1SvImJ_P0078846 Vmn1r53 protein_coding protein_coding MGP_129S1SvImJ_T0015569.1 MGP_129S1SvImJ_G0013658.1 mouse_genomes_project 6 117336430 117336863 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080338.1 MGP_129S1SvImJ_G0031321.1 mouse_genomes_project 6 131958147 131963957 - MGP_129S1SvImJ_P0080338 protein_coding protein_coding MGP_129S1SvImJ_T0080339.1 MGP_129S1SvImJ_G0031321.1 mouse_genomes_project 6 131958507 131964013 - MGP_129S1SvImJ_P0080339 protein_coding protein_coding MGP_129S1SvImJ_T0080340.1 MGP_129S1SvImJ_G0031321.1 mouse_genomes_project 6 131958512 131964013 - MGP_129S1SvImJ_P0080340 protein_coding protein_coding MGP_129S1SvImJ_T0080341.1 MGP_129S1SvImJ_G0031321.1 mouse_genomes_project 6 131959118 131963723 - MGP_129S1SvImJ_P0080341 protein_coding protein_coding MGP_129S1SvImJ_T0080342.1 MGP_129S1SvImJ_G0031321.1 mouse_genomes_project 6 131960374 131963840 - MGP_129S1SvImJ_P0080342 protein_coding protein_coding MGP_129S1SvImJ_T0080343.1 MGP_129S1SvImJ_G0031321.1 mouse_genomes_project 6 131963024 131964056 - protein_coding processed_transcript MGP_129S1SvImJ_T0080651.1 MGP_129S1SvImJ_G0031423.1 mouse_genomes_project 6 141044172 141100920 - MGP_129S1SvImJ_P0080651 Plbd1 protein_coding protein_coding MGP_129S1SvImJ_T0080652.1 MGP_129S1SvImJ_G0031423.1 mouse_genomes_project 6 141045410 141100865 - Plbd1 protein_coding retained_intron MGP_129S1SvImJ_T0080653.1 MGP_129S1SvImJ_G0031423.1 mouse_genomes_project 6 141045983 141064782 - Plbd1 protein_coding retained_intron MGP_129S1SvImJ_T0080654.1 MGP_129S1SvImJ_G0031423.1 mouse_genomes_project 6 141072583 141100555 - MGP_129S1SvImJ_P0080654 Plbd1 protein_coding protein_coding MGP_129S1SvImJ_T0077082.1 MGP_129S1SvImJ_G0030601.1 mouse_genomes_project 6 37996916 38009379 + MGP_129S1SvImJ_P0077082 Ndufb2 protein_coding protein_coding MGP_129S1SvImJ_T0077083.1 MGP_129S1SvImJ_G0030601.1 mouse_genomes_project 6 37996925 38005468 + MGP_129S1SvImJ_P0077083 Ndufb2 protein_coding protein_coding MGP_129S1SvImJ_T0077084.1 MGP_129S1SvImJ_G0030601.1 mouse_genomes_project 6 37996927 38005419 + Ndufb2 protein_coding processed_transcript MGP_129S1SvImJ_T0077085.1 MGP_129S1SvImJ_G0030601.1 mouse_genomes_project 6 37996930 38001719 + Ndufb2 protein_coding retained_intron MGP_129S1SvImJ_T0077086.1 MGP_129S1SvImJ_G0030601.1 mouse_genomes_project 6 38002235 38005289 + Ndufb2 protein_coding retained_intron MGP_129S1SvImJ_T0077087.1 MGP_129S1SvImJ_G0030601.1 mouse_genomes_project 6 38007780 38009307 + Ndufb2 protein_coding processed_transcript MGP_129S1SvImJ_T0080674.1 MGP_129S1SvImJ_G0031431.1 mouse_genomes_project 6 141418326 141436001 - MGP_129S1SvImJ_P0080674 Erp27 protein_coding protein_coding MGP_129S1SvImJ_T0080675.1 MGP_129S1SvImJ_G0031431.1 mouse_genomes_project 6 141420771 141436001 - Erp27 protein_coding retained_intron MGP_129S1SvImJ_T0080676.1 MGP_129S1SvImJ_G0031431.1 mouse_genomes_project 6 141433486 141435961 - Erp27 protein_coding retained_intron MGP_129S1SvImJ_T0015556.1 MGP_129S1SvImJ_G0013645.1 mouse_genomes_project 6 113114092 113114224 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101279.1 MGP_129S1SvImJ_G0039346.1 mouse_genomes_project 6 126697833 126697965 + Gm25065 snoRNA snoRNA MGP_129S1SvImJ_T0010814.1 MGP_129S1SvImJ_G0008930.1 mouse_genomes_project 6 115940145 115940235 + Gm24387 miRNA miRNA MGP_129S1SvImJ_T0102619.1 MGP_129S1SvImJ_G0040452.1 mouse_genomes_project 6 57853320 57854246 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0005142.1 MGP_129S1SvImJ_G0004389.1 mouse_genomes_project 6 149670145 149710010 + Sox5os4 antisense antisense MGP_129S1SvImJ_T0077882.1 MGP_129S1SvImJ_G0030834.1 mouse_genomes_project 6 65713017 65876895 + MGP_129S1SvImJ_P0077882 Prdm5 protein_coding protein_coding MGP_129S1SvImJ_T0077883.1 MGP_129S1SvImJ_G0030834.1 mouse_genomes_project 6 65713051 65776081 + Prdm5 protein_coding retained_intron MGP_129S1SvImJ_T0077884.1 MGP_129S1SvImJ_G0030834.1 mouse_genomes_project 6 65713051 65876892 + MGP_129S1SvImJ_P0077884 Prdm5 protein_coding protein_coding MGP_129S1SvImJ_T0077885.1 MGP_129S1SvImJ_G0030834.1 mouse_genomes_project 6 65713054 65876817 + MGP_129S1SvImJ_P0077885 Prdm5 protein_coding protein_coding MGP_129S1SvImJ_T0077886.1 MGP_129S1SvImJ_G0030834.1 mouse_genomes_project 6 65713123 65719105 + Prdm5 protein_coding retained_intron MGP_129S1SvImJ_T0077887.1 MGP_129S1SvImJ_G0030834.1 mouse_genomes_project 6 65713190 65876848 + MGP_129S1SvImJ_P0077887 Prdm5 protein_coding protein_coding MGP_129S1SvImJ_T0077888.1 MGP_129S1SvImJ_G0030834.1 mouse_genomes_project 6 65875609 65877529 + Prdm5 protein_coding retained_intron MGP_129S1SvImJ_T0002103.1 MGP_129S1SvImJ_G0002016.1 mouse_genomes_project 6 93003343 93004545 + TEC TEC MGP_129S1SvImJ_T0101265.1 MGP_129S1SvImJ_G0039332.1 mouse_genomes_project 6 92418450 92418546 + Gm25185 snoRNA snoRNA MGP_129S1SvImJ_T0080810.1 MGP_129S1SvImJ_G0031453.1 mouse_genomes_project 6 146380756 146447885 + MGP_129S1SvImJ_P0080810 Slco1b2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0080811.1 MGP_129S1SvImJ_G0031453.1 mouse_genomes_project 6 146392184 146445639 + MGP_129S1SvImJ_P0080811 Slco1b2 protein_coding protein_coding MGP_129S1SvImJ_T0080812.1 MGP_129S1SvImJ_G0031453.1 mouse_genomes_project 6 146410977 146415627 + Slco1b2 protein_coding retained_intron MGP_129S1SvImJ_T0080813.1 MGP_129S1SvImJ_G0031453.1 mouse_genomes_project 6 146441278 146445642 + Slco1b2 protein_coding retained_intron MGP_129S1SvImJ_T0008790.1 MGP_129S1SvImJ_G0007100.1 mouse_genomes_project 6 152296201 152297468 - Gm15767 lincRNA lincRNA MGP_129S1SvImJ_T0008791.1 MGP_129S1SvImJ_G0007100.1 mouse_genomes_project 6 152296397 152297460 - Gm15767 lincRNA lincRNA MGP_129S1SvImJ_T0078066.1 MGP_129S1SvImJ_G0030874.1 mouse_genomes_project 6 72917677 72921012 - MGP_129S1SvImJ_P0078066 Vamp5 protein_coding protein_coding MGP_129S1SvImJ_T0078067.1 MGP_129S1SvImJ_G0030874.1 mouse_genomes_project 6 72917911 72929304 - MGP_129S1SvImJ_P0078067 Vamp5 protein_coding protein_coding MGP_129S1SvImJ_T0078068.1 MGP_129S1SvImJ_G0030874.1 mouse_genomes_project 6 72917917 72929350 - MGP_129S1SvImJ_P0078068 Vamp5 protein_coding protein_coding MGP_129S1SvImJ_T0076366.1 MGP_129S1SvImJ_G0030468.1 mouse_genomes_project 6 14523496 14532279 + MGP_129S1SvImJ_P0076366 Cav2 protein_coding protein_coding MGP_129S1SvImJ_T0076367.1 MGP_129S1SvImJ_G0030468.1 mouse_genomes_project 6 14523638 14524996 + MGP_129S1SvImJ_P0076367 Cav2 protein_coding protein_coding MGP_129S1SvImJ_T0076368.1 MGP_129S1SvImJ_G0030468.1 mouse_genomes_project 6 14523670 14529750 + MGP_129S1SvImJ_P0076368 Cav2 protein_coding protein_coding MGP_129S1SvImJ_T0080485.1 MGP_129S1SvImJ_G0031363.1 mouse_genomes_project 6 133682712 133738257 - MGP_129S1SvImJ_P0080485 Klra1 protein_coding protein_coding MGP_129S1SvImJ_T0080486.1 MGP_129S1SvImJ_G0031363.1 mouse_genomes_project 6 133683012 133697380 - Klra1 protein_coding retained_intron MGP_129S1SvImJ_T0005644.1 MGP_129S1SvImJ_G0004757.1 mouse_genomes_project 6 60921054 60923312 - A730020E08Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0005645.1 MGP_129S1SvImJ_G0004757.1 mouse_genomes_project 6 60922769 60929061 - A730020E08Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0005646.1 MGP_129S1SvImJ_G0004757.1 mouse_genomes_project 6 60924805 60929601 - A730020E08Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0015453.1 MGP_129S1SvImJ_G0013542.1 mouse_genomes_project 6 70861587 70862928 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080527.1 MGP_129S1SvImJ_G0031389.1 mouse_genomes_project 6 137007073 137008075 + MGP_129S1SvImJ_P0080527 Tas2r123 protein_coding protein_coding MGP_129S1SvImJ_T0008592.1 MGP_129S1SvImJ_G0006949.1 mouse_genomes_project 6 47482482 47483375 - 1700026J14Rik lincRNA lincRNA MGP_129S1SvImJ_T0005030.1 MGP_129S1SvImJ_G0004308.1 mouse_genomes_project 6 87817792 87862182 + 1600020E01Rik antisense antisense MGP_129S1SvImJ_T0005031.1 MGP_129S1SvImJ_G0004308.1 mouse_genomes_project 6 87817792 87845797 + 1600020E01Rik antisense antisense MGP_129S1SvImJ_T0005032.1 MGP_129S1SvImJ_G0004308.1 mouse_genomes_project 6 87817818 87862182 + 1600020E01Rik antisense antisense MGP_129S1SvImJ_T0005033.1 MGP_129S1SvImJ_G0004308.1 mouse_genomes_project 6 87818357 87882397 + 1600020E01Rik antisense antisense MGP_129S1SvImJ_T0005034.1 MGP_129S1SvImJ_G0004308.1 mouse_genomes_project 6 87818866 87862182 + 1600020E01Rik antisense antisense MGP_129S1SvImJ_T0005035.1 MGP_129S1SvImJ_G0004308.1 mouse_genomes_project 6 87818948 87862181 + 1600020E01Rik antisense antisense MGP_129S1SvImJ_T0005036.1 MGP_129S1SvImJ_G0004308.1 mouse_genomes_project 6 87819021 87859386 + 1600020E01Rik antisense antisense MGP_129S1SvImJ_T0005037.1 MGP_129S1SvImJ_G0004308.1 mouse_genomes_project 6 87842759 87882827 + 1600020E01Rik antisense antisense MGP_129S1SvImJ_T0080123.1 MGP_129S1SvImJ_G0031279.1 mouse_genomes_project 6 128277095 128284211 - MGP_129S1SvImJ_P0080123 Cops7a protein_coding protein_coding MGP_129S1SvImJ_T0080124.1 MGP_129S1SvImJ_G0031279.1 mouse_genomes_project 6 128277498 128284121 - MGP_129S1SvImJ_P0080124 Cops7a protein_coding protein_coding MGP_129S1SvImJ_T0080125.1 MGP_129S1SvImJ_G0031279.1 mouse_genomes_project 6 128277916 128278824 - Cops7a protein_coding retained_intron MGP_129S1SvImJ_T0080126.1 MGP_129S1SvImJ_G0031279.1 mouse_genomes_project 6 128278589 128283963 - MGP_129S1SvImJ_P0080126 Cops7a protein_coding protein_coding MGP_129S1SvImJ_T0080127.1 MGP_129S1SvImJ_G0031279.1 mouse_genomes_project 6 128279840 128284081 - MGP_129S1SvImJ_P0080127 Cops7a protein_coding protein_coding MGP_129S1SvImJ_T0080128.1 MGP_129S1SvImJ_G0031279.1 mouse_genomes_project 6 128281305 128283880 - MGP_129S1SvImJ_P0080128 Cops7a protein_coding protein_coding MGP_129S1SvImJ_T0080129.1 MGP_129S1SvImJ_G0031279.1 mouse_genomes_project 6 128283226 128284185 - Cops7a protein_coding retained_intron MGP_129S1SvImJ_T0077550.1 MGP_129S1SvImJ_G0030738.1 mouse_genomes_project 6 51388688 51391416 - MGP_129S1SvImJ_P0077550 Hoxa1 protein_coding protein_coding MGP_129S1SvImJ_T0077551.1 MGP_129S1SvImJ_G0030738.1 mouse_genomes_project 6 51388693 51391416 - MGP_129S1SvImJ_P0077551 Hoxa1 protein_coding protein_coding MGP_129S1SvImJ_T0076752.1 MGP_129S1SvImJ_G0030538.1 mouse_genomes_project 6 28398855 28411458 + MGP_129S1SvImJ_P0076752 Ssmem1 protein_coding protein_coding MGP_129S1SvImJ_T0076753.1 MGP_129S1SvImJ_G0030538.1 mouse_genomes_project 6 28401292 28411459 + MGP_129S1SvImJ_P0076753 Ssmem1 protein_coding protein_coding MGP_129S1SvImJ_T0076754.1 MGP_129S1SvImJ_G0030538.1 mouse_genomes_project 6 28404891 28410749 + MGP_129S1SvImJ_P0076754 Ssmem1 protein_coding protein_coding MGP_129S1SvImJ_T0008570.1 MGP_129S1SvImJ_G0006938.1 mouse_genomes_project 6 33398406 33409273 + 1810058I24Rik lincRNA lincRNA MGP_129S1SvImJ_T0008571.1 MGP_129S1SvImJ_G0006938.1 mouse_genomes_project 6 33398468 33407390 + 1810058I24Rik lincRNA lincRNA MGP_129S1SvImJ_T0008572.1 MGP_129S1SvImJ_G0006938.1 mouse_genomes_project 6 33398484 33407775 + 1810058I24Rik lincRNA lincRNA MGP_129S1SvImJ_T0008786.1 MGP_129S1SvImJ_G0007097.1 mouse_genomes_project 6 151036102 151038330 - Gm44269 lincRNA lincRNA MGP_129S1SvImJ_T0015333.1 MGP_129S1SvImJ_G0013422.1 mouse_genomes_project 6 40000005 40000381 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077042.1 MGP_129S1SvImJ_G0030593.1 mouse_genomes_project 6 37439666 37473712 - MGP_129S1SvImJ_P0077042 Parp12 protein_coding protein_coding MGP_129S1SvImJ_T0077043.1 MGP_129S1SvImJ_G0030593.1 mouse_genomes_project 6 37442263 37444341 - Parp12 protein_coding retained_intron MGP_129S1SvImJ_T0079993.1 MGP_129S1SvImJ_G0031257.1 mouse_genomes_project 6 127685779 127720533 - MGP_129S1SvImJ_P0079993 Clstn3 protein_coding protein_coding MGP_129S1SvImJ_T0079994.1 MGP_129S1SvImJ_G0031257.1 mouse_genomes_project 6 127686332 127688532 - Clstn3 protein_coding processed_transcript MGP_129S1SvImJ_T0079995.1 MGP_129S1SvImJ_G0031257.1 mouse_genomes_project 6 127691800 127693908 - Clstn3 protein_coding retained_intron MGP_129S1SvImJ_T0079996.1 MGP_129S1SvImJ_G0031257.1 mouse_genomes_project 6 127693932 127704413 - Clstn3 protein_coding retained_intron MGP_129S1SvImJ_T0079997.1 MGP_129S1SvImJ_G0031257.1 mouse_genomes_project 6 127710952 127713934 - Clstn3 protein_coding processed_transcript MGP_129S1SvImJ_T0079998.1 MGP_129S1SvImJ_G0031257.1 mouse_genomes_project 6 127717658 127720150 - MGP_129S1SvImJ_P0079998 Clstn3 protein_coding protein_coding MGP_129S1SvImJ_T0077178.1 MGP_129S1SvImJ_G0030640.1 mouse_genomes_project 6 40558991 40564864 + MGP_129S1SvImJ_P0077178 Sva protein_coding protein_coding MGP_129S1SvImJ_T0077179.1 MGP_129S1SvImJ_G0030640.1 mouse_genomes_project 6 40558991 40564870 + MGP_129S1SvImJ_P0077179 Sva protein_coding protein_coding MGP_129S1SvImJ_T0078843.1 MGP_129S1SvImJ_G0031029.1 mouse_genomes_project 6 91584153 91590806 + MGP_129S1SvImJ_P0078843 Vmn1r50 protein_coding protein_coding MGP_129S1SvImJ_T0078844.1 MGP_129S1SvImJ_G0031029.1 mouse_genomes_project 6 91589873 91590806 + MGP_129S1SvImJ_P0078844 Vmn1r50 protein_coding protein_coding MGP_129S1SvImJ_T0015553.1 MGP_129S1SvImJ_G0013642.1 mouse_genomes_project 6 111861339 111861592 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079648.1 MGP_129S1SvImJ_G0031184.1 mouse_genomes_project 6 120893071 120942832 - MGP_129S1SvImJ_P0079648 Ret protein_coding protein_coding MGP_129S1SvImJ_T0079649.1 MGP_129S1SvImJ_G0031184.1 mouse_genomes_project 6 120895892 120943417 - MGP_129S1SvImJ_P0079649 Ret protein_coding protein_coding MGP_129S1SvImJ_T0079878.1 MGP_129S1SvImJ_G0031222.1 mouse_genomes_project 6 125344598 125358207 - MGP_129S1SvImJ_P0079878 Klrg1 protein_coding protein_coding MGP_129S1SvImJ_T0015372.1 MGP_129S1SvImJ_G0013461.1 mouse_genomes_project 6 51611664 51611945 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002026.1 MGP_129S1SvImJ_G0001939.1 mouse_genomes_project 6 71945316 71948098 - TEC TEC MGP_129S1SvImJ_T0010831.1 MGP_129S1SvImJ_G0008947.1 mouse_genomes_project 6 131325954 131326014 - Mir7233 miRNA miRNA MGP_129S1SvImJ_T0102607.1 MGP_129S1SvImJ_G0040440.1 mouse_genomes_project 6 41734693 41735000 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0077494.1 MGP_129S1SvImJ_G0030728.1 mouse_genomes_project 6 49284533 49289154 - Dfna5 protein_coding retained_intron MGP_129S1SvImJ_T0077495.1 MGP_129S1SvImJ_G0030728.1 mouse_genomes_project 6 49285010 49358396 - MGP_129S1SvImJ_P0077495 Dfna5 protein_coding protein_coding MGP_129S1SvImJ_T0077497.1 MGP_129S1SvImJ_G0030728.1 mouse_genomes_project 6 49295774 49358388 - MGP_129S1SvImJ_P0077497 Dfna5 protein_coding protein_coding MGP_129S1SvImJ_T0077498.1 MGP_129S1SvImJ_G0030728.1 mouse_genomes_project 6 49303124 49360503 - MGP_129S1SvImJ_P0077498 Dfna5 protein_coding protein_coding MGP_129S1SvImJ_T0077499.1 MGP_129S1SvImJ_G0030728.1 mouse_genomes_project 6 49303126 49358410 - MGP_129S1SvImJ_P0077499 Dfna5 protein_coding protein_coding MGP_129S1SvImJ_T0077500.1 MGP_129S1SvImJ_G0030728.1 mouse_genomes_project 6 49342705 49358667 - MGP_129S1SvImJ_P0077500 Dfna5 protein_coding protein_coding MGP_129S1SvImJ_T0077501.1 MGP_129S1SvImJ_G0030728.1 mouse_genomes_project 6 49356021 49358616 - Dfna5 protein_coding retained_intron MGP_129S1SvImJ_T0002079.1 MGP_129S1SvImJ_G0001992.1 mouse_genomes_project 6 88597625 88600990 - TEC TEC MGP_129S1SvImJ_T0015502.1 MGP_129S1SvImJ_G0013591.1 mouse_genomes_project 6 87551473 87552481 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076439.1 MGP_129S1SvImJ_G0030478.1 mouse_genomes_project 6 16183947 16206905 + MGP_129S1SvImJ_P0076439 Ankrd7 protein_coding protein_coding MGP_129S1SvImJ_T0076440.1 MGP_129S1SvImJ_G0030478.1 mouse_genomes_project 6 16183979 16206901 + MGP_129S1SvImJ_P0076440 Ankrd7 protein_coding protein_coding MGP_129S1SvImJ_T0010798.1 MGP_129S1SvImJ_G0008914.1 mouse_genomes_project 6 84094050 84094127 - Mir3470a miRNA miRNA MGP_129S1SvImJ_T0008782.1 MGP_129S1SvImJ_G0007093.1 mouse_genomes_project 6 148470831 148531308 - 1700060C16Rik lincRNA lincRNA MGP_129S1SvImJ_T0077961.1 MGP_129S1SvImJ_G0030857.1 mouse_genomes_project 6 71849731 71854529 + Cd8a protein_coding retained_intron MGP_129S1SvImJ_T0077962.1 MGP_129S1SvImJ_G0030857.1 mouse_genomes_project 6 71849736 71853833 + MGP_129S1SvImJ_P0077962 Cd8a protein_coding protein_coding MGP_129S1SvImJ_T0015319.1 MGP_129S1SvImJ_G0013408.1 mouse_genomes_project 6 35770588 35771135 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008521.1 MGP_129S1SvImJ_G0006903.1 mouse_genomes_project 6 10490474 10493134 + 1700016P04Rik lincRNA lincRNA MGP_129S1SvImJ_T0100034.1 MGP_129S1SvImJ_G0038101.1 mouse_genomes_project 6 140665758 140665948 + Gm26105 snRNA snRNA MGP_129S1SvImJ_T0080058.1 MGP_129S1SvImJ_G0031267.1 mouse_genomes_project 6 128074008 128082951 - MGP_129S1SvImJ_P0080058 Lrrc23 protein_coding protein_coding MGP_129S1SvImJ_T0080059.1 MGP_129S1SvImJ_G0031267.1 mouse_genomes_project 6 128074014 128082960 - MGP_129S1SvImJ_P0080059 Lrrc23 protein_coding protein_coding MGP_129S1SvImJ_T0080060.1 MGP_129S1SvImJ_G0031267.1 mouse_genomes_project 6 128074750 128077843 - Lrrc23 protein_coding retained_intron MGP_129S1SvImJ_T0080061.1 MGP_129S1SvImJ_G0031267.1 mouse_genomes_project 6 128081494 128082950 - MGP_129S1SvImJ_P0080061 Lrrc23 protein_coding protein_coding MGP_129S1SvImJ_T0080062.1 MGP_129S1SvImJ_G0031267.1 mouse_genomes_project 6 128082133 128082937 - MGP_129S1SvImJ_P0080062 Lrrc23 protein_coding protein_coding MGP_129S1SvImJ_T0015441.1 MGP_129S1SvImJ_G0013530.1 mouse_genomes_project 6 68409312 68410515 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010791.1 MGP_129S1SvImJ_G0008907.1 mouse_genomes_project 6 70373030 70373140 - Gm23694 miRNA miRNA MGP_129S1SvImJ_T0005006.1 MGP_129S1SvImJ_G0004295.1 mouse_genomes_project 6 83747848 83750862 + Gm17034 antisense antisense MGP_129S1SvImJ_T0080068.1 MGP_129S1SvImJ_G0031269.1 mouse_genomes_project 6 128117371 128121059 - MGP_129S1SvImJ_P0080068 Tpi1 protein_coding protein_coding MGP_129S1SvImJ_T0080069.1 MGP_129S1SvImJ_G0031269.1 mouse_genomes_project 6 128118058 128118673 - Tpi1 protein_coding retained_intron MGP_129S1SvImJ_T0080070.1 MGP_129S1SvImJ_G0031269.1 mouse_genomes_project 6 128119235 128119627 - Tpi1 protein_coding retained_intron MGP_129S1SvImJ_T0080071.1 MGP_129S1SvImJ_G0031269.1 mouse_genomes_project 6 128119321 128120945 - Tpi1 protein_coding retained_intron MGP_129S1SvImJ_T0080072.1 MGP_129S1SvImJ_G0031269.1 mouse_genomes_project 6 128120250 128120941 - Tpi1 protein_coding retained_intron MGP_129S1SvImJ_T0002697.1 MGP_129S1SvImJ_G0002579.1 mouse_genomes_project 6 39533755 39534248 + MGP_129S1SvImJ_P0002697 Trbv4 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0079129.1 MGP_129S1SvImJ_G0031089.1 mouse_genomes_project 6 103225640 103473703 - MGP_129S1SvImJ_P0079129 Pdzrn3 protein_coding protein_coding MGP_129S1SvImJ_T0079130.1 MGP_129S1SvImJ_G0031089.1 mouse_genomes_project 6 103233006 103450483 - Pdzrn3 protein_coding processed_transcript MGP_129S1SvImJ_T0079131.1 MGP_129S1SvImJ_G0031089.1 mouse_genomes_project 6 103247097 103276417 - Pdzrn3 protein_coding retained_intron MGP_129S1SvImJ_T0079132.1 MGP_129S1SvImJ_G0031089.1 mouse_genomes_project 6 103257119 103473148 - Pdzrn3 protein_coding processed_transcript MGP_129S1SvImJ_T0005004.1 MGP_129S1SvImJ_G0004293.1 mouse_genomes_project 6 83010203 83012330 - Gm15864 antisense antisense MGP_129S1SvImJ_T0079230.1 MGP_129S1SvImJ_G0031111.1 mouse_genomes_project 6 115525228 115549548 + MGP_129S1SvImJ_P0079230 Thumpd3 protein_coding protein_coding MGP_129S1SvImJ_T0079231.1 MGP_129S1SvImJ_G0031111.1 mouse_genomes_project 6 115525305 115534771 + MGP_129S1SvImJ_P0079231 Thumpd3 protein_coding protein_coding MGP_129S1SvImJ_T0079232.1 MGP_129S1SvImJ_G0031111.1 mouse_genomes_project 6 115525318 115542072 + Thumpd3 protein_coding retained_intron MGP_129S1SvImJ_T0079233.1 MGP_129S1SvImJ_G0031111.1 mouse_genomes_project 6 115525330 115528546 + Thumpd3 protein_coding retained_intron MGP_129S1SvImJ_T0079234.1 MGP_129S1SvImJ_G0031111.1 mouse_genomes_project 6 115525360 115527022 + Thumpd3 protein_coding retained_intron MGP_129S1SvImJ_T0079235.1 MGP_129S1SvImJ_G0031111.1 mouse_genomes_project 6 115525461 115526682 + MGP_129S1SvImJ_P0079235 Thumpd3 protein_coding protein_coding MGP_129S1SvImJ_T0079236.1 MGP_129S1SvImJ_G0031111.1 mouse_genomes_project 6 115525758 115526708 + MGP_129S1SvImJ_P0079236 Thumpd3 protein_coding protein_coding MGP_129S1SvImJ_T0079237.1 MGP_129S1SvImJ_G0031111.1 mouse_genomes_project 6 115526418 115530059 + Thumpd3 protein_coding processed_transcript MGP_129S1SvImJ_T0079238.1 MGP_129S1SvImJ_G0031111.1 mouse_genomes_project 6 115538006 115542296 + Thumpd3 protein_coding retained_intron MGP_129S1SvImJ_T0079239.1 MGP_129S1SvImJ_G0031111.1 mouse_genomes_project 6 115546700 115549171 + Thumpd3 protein_coding retained_intron MGP_129S1SvImJ_T0101757.1 MGP_129S1SvImJ_G0039744.1 mouse_genomes_project 6 150384296 150398810 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101758.1 MGP_129S1SvImJ_G0039744.1 mouse_genomes_project 6 150384297 150388943 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101759.1 MGP_129S1SvImJ_G0039744.1 mouse_genomes_project 6 150387010 150388752 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101760.1 MGP_129S1SvImJ_G0039744.1 mouse_genomes_project 6 150388128 150388869 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0076181.1 MGP_129S1SvImJ_G0030431.1 mouse_genomes_project 6 1701044 1984186 + MGP_129S1SvImJ_P0076181 Ppp1r9a protein_coding protein_coding MGP_129S1SvImJ_T0076182.1 MGP_129S1SvImJ_G0030431.1 mouse_genomes_project 6 1701101 1885991 + MGP_129S1SvImJ_P0076182 Ppp1r9a protein_coding protein_coding MGP_129S1SvImJ_T0076183.1 MGP_129S1SvImJ_G0030431.1 mouse_genomes_project 6 1701145 1984817 + MGP_129S1SvImJ_P0076183 Ppp1r9a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076184.1 MGP_129S1SvImJ_G0030431.1 mouse_genomes_project 6 1702777 1990260 + MGP_129S1SvImJ_P0076184 Ppp1r9a protein_coding protein_coding MGP_129S1SvImJ_T0076185.1 MGP_129S1SvImJ_G0030431.1 mouse_genomes_project 6 1702798 1818955 + MGP_129S1SvImJ_P0076185 Ppp1r9a protein_coding protein_coding MGP_129S1SvImJ_T0076186.1 MGP_129S1SvImJ_G0030431.1 mouse_genomes_project 6 1702857 1989112 + Ppp1r9a protein_coding retained_intron MGP_129S1SvImJ_T0076187.1 MGP_129S1SvImJ_G0030431.1 mouse_genomes_project 6 1703213 1706213 + MGP_129S1SvImJ_P0076187 Ppp1r9a protein_coding protein_coding MGP_129S1SvImJ_T0076188.1 MGP_129S1SvImJ_G0030431.1 mouse_genomes_project 6 1704841 1984405 + MGP_129S1SvImJ_P0076188 Ppp1r9a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076189.1 MGP_129S1SvImJ_G0030431.1 mouse_genomes_project 6 1704841 1984413 + MGP_129S1SvImJ_P0076189 Ppp1r9a protein_coding protein_coding MGP_129S1SvImJ_T0076190.1 MGP_129S1SvImJ_G0030431.1 mouse_genomes_project 6 1705832 1978846 + MGP_129S1SvImJ_P0076190 Ppp1r9a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076191.1 MGP_129S1SvImJ_G0030431.1 mouse_genomes_project 6 1921715 1924844 + Ppp1r9a protein_coding processed_transcript MGP_129S1SvImJ_T0076192.1 MGP_129S1SvImJ_G0030431.1 mouse_genomes_project 6 1924515 1927565 + Ppp1r9a protein_coding retained_intron MGP_129S1SvImJ_T0079588.1 MGP_129S1SvImJ_G0031171.1 mouse_genomes_project 6 119238771 119241872 + MGP_129S1SvImJ_P0079588 Olfr214 protein_coding protein_coding MGP_129S1SvImJ_T0079589.1 MGP_129S1SvImJ_G0031171.1 mouse_genomes_project 6 119240864 119241872 + MGP_129S1SvImJ_P0079589 Olfr214 protein_coding protein_coding MGP_129S1SvImJ_T0008656.1 MGP_129S1SvImJ_G0007000.1 mouse_genomes_project 6 83869637 83873627 - 2310069B03Rik lincRNA lincRNA MGP_129S1SvImJ_T0008657.1 MGP_129S1SvImJ_G0007000.1 mouse_genomes_project 6 83870300 83873627 - 2310069B03Rik lincRNA lincRNA MGP_129S1SvImJ_T0008658.1 MGP_129S1SvImJ_G0007000.1 mouse_genomes_project 6 83871194 83873606 - 2310069B03Rik lincRNA lincRNA MGP_129S1SvImJ_T0080319.1 MGP_129S1SvImJ_G0031317.1 mouse_genomes_project 6 131433307 131503168 + MGP_129S1SvImJ_P0080319 Tspan11 protein_coding protein_coding MGP_129S1SvImJ_T0080320.1 MGP_129S1SvImJ_G0031317.1 mouse_genomes_project 6 131433495 131470271 + Tspan11 protein_coding retained_intron MGP_129S1SvImJ_T0008794.1 MGP_129S1SvImJ_G0007102.1 mouse_genomes_project 6 152782131 152786359 - lincRNA lincRNA MGP_129S1SvImJ_T0001997.1 MGP_129S1SvImJ_G0001910.1 mouse_genomes_project 6 44841431 44843932 + TEC TEC MGP_129S1SvImJ_T0076506.1 MGP_129S1SvImJ_G0030493.1 mouse_genomes_project 6 22011007 22080591 - MGP_129S1SvImJ_P0076506 Iqub protein_coding protein_coding MGP_129S1SvImJ_T0002179.1 MGP_129S1SvImJ_G0002091.1 mouse_genomes_project 6 138308484 138310313 + TEC TEC MGP_129S1SvImJ_T0100001.1 MGP_129S1SvImJ_G0038068.1 mouse_genomes_project 6 64317850 64317953 + Gm25205 snRNA snRNA MGP_129S1SvImJ_T0080947.1 MGP_129S1SvImJ_G0031478.1 mouse_genomes_project 6 150195240 150199905 + MGP_129S1SvImJ_P0080947 Lyrm5 protein_coding protein_coding MGP_129S1SvImJ_T0080948.1 MGP_129S1SvImJ_G0031478.1 mouse_genomes_project 6 150195262 150201055 + MGP_129S1SvImJ_P0080948 Lyrm5 protein_coding protein_coding MGP_129S1SvImJ_T0080949.1 MGP_129S1SvImJ_G0031478.1 mouse_genomes_project 6 150195262 150200652 + MGP_129S1SvImJ_P0080949 Lyrm5 protein_coding protein_coding MGP_129S1SvImJ_T0080950.1 MGP_129S1SvImJ_G0031478.1 mouse_genomes_project 6 150195276 150199081 + Lyrm5 protein_coding processed_transcript MGP_129S1SvImJ_T0080951.1 MGP_129S1SvImJ_G0031478.1 mouse_genomes_project 6 150195281 150200652 + MGP_129S1SvImJ_P0080951 Lyrm5 protein_coding protein_coding MGP_129S1SvImJ_T0080952.1 MGP_129S1SvImJ_G0031478.1 mouse_genomes_project 6 150195281 150199885 + MGP_129S1SvImJ_P0080952 Lyrm5 protein_coding protein_coding MGP_129S1SvImJ_T0080953.1 MGP_129S1SvImJ_G0031478.1 mouse_genomes_project 6 150195292 150200652 + MGP_129S1SvImJ_P0080953 Lyrm5 protein_coding protein_coding MGP_129S1SvImJ_T0080954.1 MGP_129S1SvImJ_G0031478.1 mouse_genomes_project 6 150195306 150199848 + MGP_129S1SvImJ_P0080954 Lyrm5 protein_coding protein_coding MGP_129S1SvImJ_T0005654.1 MGP_129S1SvImJ_G0004762.1 mouse_genomes_project 6 118856830 118865420 - 9530062K07Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0015592.1 MGP_129S1SvImJ_G0013681.1 mouse_genomes_project 6 124941467 124941599 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080384.1 MGP_129S1SvImJ_G0031330.1 mouse_genomes_project 6 132241805 132255523 - MGP_129S1SvImJ_P0080384 Klrb1a protein_coding protein_coding MGP_129S1SvImJ_T0080385.1 MGP_129S1SvImJ_G0031330.1 mouse_genomes_project 6 132250616 132255502 - MGP_129S1SvImJ_P0080385 Klrb1a protein_coding protein_coding MGP_129S1SvImJ_T0080387.1 MGP_129S1SvImJ_G0031330.1 mouse_genomes_project 6 132251705 132256123 - MGP_129S1SvImJ_P0080387 Klrb1a protein_coding protein_coding MGP_129S1SvImJ_T0102613.1 MGP_129S1SvImJ_G0040446.1 mouse_genomes_project 6 57396571 57397073 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0078660.1 MGP_129S1SvImJ_G0030995.1 mouse_genomes_project 6 88985534 89032142 - MGP_129S1SvImJ_P0078660 Aplf protein_coding protein_coding MGP_129S1SvImJ_T0078661.1 MGP_129S1SvImJ_G0030995.1 mouse_genomes_project 6 88986623 89032059 - MGP_129S1SvImJ_P0078661 Aplf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078662.1 MGP_129S1SvImJ_G0030995.1 mouse_genomes_project 6 88986628 89032188 - MGP_129S1SvImJ_P0078662 Aplf protein_coding protein_coding MGP_129S1SvImJ_T0078663.1 MGP_129S1SvImJ_G0030995.1 mouse_genomes_project 6 89009446 89032124 - Aplf protein_coding retained_intron MGP_129S1SvImJ_T0102647.1 MGP_129S1SvImJ_G0040480.1 mouse_genomes_project 6 134253030 134948436 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015438.1 MGP_129S1SvImJ_G0013527.1 mouse_genomes_project 6 67888144 67889223 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079116.1 MGP_129S1SvImJ_G0031085.1 mouse_genomes_project 6 102232417 102303136 - MGP_129S1SvImJ_P0079116 Rybp protein_coding protein_coding MGP_129S1SvImJ_T0079117.1 MGP_129S1SvImJ_G0031085.1 mouse_genomes_project 6 102239191 102242436 - Rybp protein_coding retained_intron MGP_129S1SvImJ_T0079118.1 MGP_129S1SvImJ_G0031085.1 mouse_genomes_project 6 102239353 102302928 - MGP_129S1SvImJ_P0079118 Rybp protein_coding unknown_likely_coding MGP_129S1SvImJ_T0079119.1 MGP_129S1SvImJ_G0031085.1 mouse_genomes_project 6 102242398 102302450 - Rybp protein_coding retained_intron MGP_129S1SvImJ_T0076642.1 MGP_129S1SvImJ_G0030526.1 mouse_genomes_project 6 27270661 27281541 - Kcp protein_coding retained_intron MGP_129S1SvImJ_T0076643.1 MGP_129S1SvImJ_G0030526.1 mouse_genomes_project 6 27279428 27307053 - MGP_129S1SvImJ_P0076643 Kcp protein_coding unknown_likely_coding MGP_129S1SvImJ_T0076644.1 MGP_129S1SvImJ_G0030526.1 mouse_genomes_project 6 27279432 27282257 - MGP_129S1SvImJ_P0076644 Kcp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076645.1 MGP_129S1SvImJ_G0030526.1 mouse_genomes_project 6 27279432 27307064 - MGP_129S1SvImJ_P0076645 Kcp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076646.1 MGP_129S1SvImJ_G0030526.1 mouse_genomes_project 6 27279432 27295040 - MGP_129S1SvImJ_P0076646 Kcp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076647.1 MGP_129S1SvImJ_G0030526.1 mouse_genomes_project 6 27279433 27307079 - MGP_129S1SvImJ_P0076647 Kcp protein_coding protein_coding MGP_129S1SvImJ_T0076648.1 MGP_129S1SvImJ_G0030526.1 mouse_genomes_project 6 27279433 27307077 - MGP_129S1SvImJ_P0076648 Kcp protein_coding protein_coding MGP_129S1SvImJ_T0076649.1 MGP_129S1SvImJ_G0030526.1 mouse_genomes_project 6 27281089 27282369 - Kcp protein_coding retained_intron MGP_129S1SvImJ_T0076650.1 MGP_129S1SvImJ_G0030526.1 mouse_genomes_project 6 27295970 27297734 - Kcp protein_coding retained_intron MGP_129S1SvImJ_T0076651.1 MGP_129S1SvImJ_G0030526.1 mouse_genomes_project 6 27297055 27301951 - MGP_129S1SvImJ_P0076651 Kcp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076652.1 MGP_129S1SvImJ_G0030526.1 mouse_genomes_project 6 27301416 27307079 - MGP_129S1SvImJ_P0076652 Kcp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0002520.1 MGP_129S1SvImJ_G0002427.1 mouse_genomes_project 6 40040661 40040673 + MGP_129S1SvImJ_P0002520 Trbd1 TR_D_gene TR_D_gene MGP_129S1SvImJ_T0077106.1 MGP_129S1SvImJ_G0030606.1 mouse_genomes_project 6 38856817 38894401 - MGP_129S1SvImJ_P0077106 E330009J07Rik protein_coding protein_coding MGP_129S1SvImJ_T0077107.1 MGP_129S1SvImJ_G0030606.1 mouse_genomes_project 6 38862942 38894399 - MGP_129S1SvImJ_P0077107 E330009J07Rik protein_coding protein_coding MGP_129S1SvImJ_T0077108.1 MGP_129S1SvImJ_G0030606.1 mouse_genomes_project 6 38876392 38889682 - MGP_129S1SvImJ_P0077108 E330009J07Rik protein_coding protein_coding MGP_129S1SvImJ_T0077109.1 MGP_129S1SvImJ_G0030606.1 mouse_genomes_project 6 38881322 38894381 - E330009J07Rik protein_coding retained_intron MGP_129S1SvImJ_T0079436.1 MGP_129S1SvImJ_G0031143.1 mouse_genomes_project 6 117452205 117467636 - Vgll4 protein_coding processed_transcript MGP_129S1SvImJ_T0079437.1 MGP_129S1SvImJ_G0031143.1 mouse_genomes_project 6 117453001 117513885 - MGP_129S1SvImJ_P0079437 Vgll4 protein_coding protein_coding MGP_129S1SvImJ_T0079438.1 MGP_129S1SvImJ_G0031143.1 mouse_genomes_project 6 117453768 117467549 - Vgll4 protein_coding processed_transcript MGP_129S1SvImJ_T0079439.1 MGP_129S1SvImJ_G0031143.1 mouse_genomes_project 6 117453768 117456335 - Vgll4 protein_coding processed_transcript MGP_129S1SvImJ_T0079440.1 MGP_129S1SvImJ_G0031143.1 mouse_genomes_project 6 117453898 117563197 - MGP_129S1SvImJ_P0079440 Vgll4 protein_coding protein_coding MGP_129S1SvImJ_T0079441.1 MGP_129S1SvImJ_G0031143.1 mouse_genomes_project 6 117454341 117564011 - MGP_129S1SvImJ_P0079441 Vgll4 protein_coding protein_coding MGP_129S1SvImJ_T0079442.1 MGP_129S1SvImJ_G0031143.1 mouse_genomes_project 6 117512117 117513880 - Vgll4 protein_coding retained_intron MGP_129S1SvImJ_T0079711.1 MGP_129S1SvImJ_G0031194.1 mouse_genomes_project 6 122235552 122253283 - MGP_129S1SvImJ_P0079711 Wnt5b protein_coding protein_coding MGP_129S1SvImJ_T0079712.1 MGP_129S1SvImJ_G0031194.1 mouse_genomes_project 6 122235561 122363336 - MGP_129S1SvImJ_P0079712 Wnt5b protein_coding protein_coding MGP_129S1SvImJ_T0008556.1 MGP_129S1SvImJ_G0006926.1 mouse_genomes_project 6 29511786 29513537 + Gm6117 lincRNA lincRNA MGP_129S1SvImJ_T0008551.1 MGP_129S1SvImJ_G0006923.1 mouse_genomes_project 6 29270194 29285812 + Gm14532 lincRNA lincRNA MGP_129S1SvImJ_T0080880.1 MGP_129S1SvImJ_G0031471.1 mouse_genomes_project 6 147636334 147787008 - MGP_129S1SvImJ_P0080880 St8sia1 protein_coding protein_coding MGP_129S1SvImJ_T0080881.1 MGP_129S1SvImJ_G0031471.1 mouse_genomes_project 6 147643013 147786697 - MGP_129S1SvImJ_P0080881 St8sia1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080882.1 MGP_129S1SvImJ_G0031471.1 mouse_genomes_project 6 147643642 147700886 - St8sia1 protein_coding processed_transcript MGP_129S1SvImJ_T0001976.1 MGP_129S1SvImJ_G0001889.1 mouse_genomes_project 6 38542796 38546123 + TEC TEC MGP_129S1SvImJ_T0000192.1 MGP_129S1SvImJ_G0000147.1 mouse_genomes_project 6 69849355 69849854 - MGP_129S1SvImJ_P0000192 Igkv4-74 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0077746.1 MGP_129S1SvImJ_G0030785.1 mouse_genomes_project 6 56443797 56444851 + MGP_129S1SvImJ_P0077746 Vmn1r5 protein_coding protein_coding MGP_129S1SvImJ_T0000140.1 MGP_129S1SvImJ_G0000107.1 mouse_genomes_project 6 67571084 67571734 + MGP_129S1SvImJ_P0000140 Igkv2-137 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0015683.1 MGP_129S1SvImJ_G0013772.1 mouse_genomes_project 6 152328835 152329648 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081145.1 MGP_129S1SvImJ_G0031511.1 mouse_genomes_project 6 154438151 154461419 + MGP_129S1SvImJ_P0081145 2810474O19Rik protein_coding protein_coding MGP_129S1SvImJ_T0081146.1 MGP_129S1SvImJ_G0031511.1 mouse_genomes_project 6 154438165 154470451 + MGP_129S1SvImJ_P0081146 2810474O19Rik protein_coding protein_coding MGP_129S1SvImJ_T0081147.1 MGP_129S1SvImJ_G0031511.1 mouse_genomes_project 6 154438193 154463725 + MGP_129S1SvImJ_P0081147 2810474O19Rik protein_coding protein_coding MGP_129S1SvImJ_T0081148.1 MGP_129S1SvImJ_G0031511.1 mouse_genomes_project 6 154438211 154469666 + MGP_129S1SvImJ_P0081148 2810474O19Rik protein_coding protein_coding MGP_129S1SvImJ_T0081149.1 MGP_129S1SvImJ_G0031511.1 mouse_genomes_project 6 154438211 154469666 + MGP_129S1SvImJ_P0081149 2810474O19Rik protein_coding protein_coding MGP_129S1SvImJ_T0081150.1 MGP_129S1SvImJ_G0031511.1 mouse_genomes_project 6 154438310 154439193 + 2810474O19Rik protein_coding retained_intron MGP_129S1SvImJ_T0081151.1 MGP_129S1SvImJ_G0031511.1 mouse_genomes_project 6 154438465 154460237 + MGP_129S1SvImJ_P0081151 2810474O19Rik protein_coding protein_coding MGP_129S1SvImJ_T0081152.1 MGP_129S1SvImJ_G0031511.1 mouse_genomes_project 6 154440153 154443981 + 2810474O19Rik protein_coding retained_intron MGP_129S1SvImJ_T0081153.1 MGP_129S1SvImJ_G0031511.1 mouse_genomes_project 6 154446933 154460715 + MGP_129S1SvImJ_P0081153 2810474O19Rik protein_coding protein_coding MGP_129S1SvImJ_T0081154.1 MGP_129S1SvImJ_G0031511.1 mouse_genomes_project 6 154459403 154460521 + MGP_129S1SvImJ_P0081154 2810474O19Rik protein_coding protein_coding MGP_129S1SvImJ_T0081155.1 MGP_129S1SvImJ_G0031511.1 mouse_genomes_project 6 154460152 154470446 + MGP_129S1SvImJ_P0081155 2810474O19Rik protein_coding protein_coding MGP_129S1SvImJ_T0078346.1 MGP_129S1SvImJ_G0030933.1 mouse_genomes_project 6 84518470 84542755 - MGP_129S1SvImJ_P0078346 Actg2 protein_coding protein_coding MGP_129S1SvImJ_T0078347.1 MGP_129S1SvImJ_G0030933.1 mouse_genomes_project 6 84518477 84534644 - MGP_129S1SvImJ_P0078347 Actg2 protein_coding protein_coding MGP_129S1SvImJ_T0078348.1 MGP_129S1SvImJ_G0030933.1 mouse_genomes_project 6 84526053 84533567 - Actg2 protein_coding processed_transcript MGP_129S1SvImJ_T0078349.1 MGP_129S1SvImJ_G0030933.1 mouse_genomes_project 6 84526053 84542713 - MGP_129S1SvImJ_P0078349 Actg2 protein_coding protein_coding MGP_129S1SvImJ_T0078350.1 MGP_129S1SvImJ_G0030933.1 mouse_genomes_project 6 84526194 84534144 - MGP_129S1SvImJ_P0078350 Actg2 protein_coding protein_coding MGP_129S1SvImJ_T0078351.1 MGP_129S1SvImJ_G0030933.1 mouse_genomes_project 6 84526969 84534464 - MGP_129S1SvImJ_P0078351 Actg2 protein_coding protein_coding MGP_129S1SvImJ_T0010783.1 MGP_129S1SvImJ_G0008899.1 mouse_genomes_project 6 46959171 46959264 + Gm24563 miRNA miRNA MGP_129S1SvImJ_T0078488.1 MGP_129S1SvImJ_G0030959.1 mouse_genomes_project 6 86904068 86905447 - MGP_129S1SvImJ_P0078488 protein_coding protein_coding MGP_129S1SvImJ_T0002043.1 MGP_129S1SvImJ_G0001956.1 mouse_genomes_project 6 78209167 78213286 - TEC TEC MGP_129S1SvImJ_T0005126.1 MGP_129S1SvImJ_G0004376.1 mouse_genomes_project 6 139529535 139538094 + Gm19434 antisense antisense MGP_129S1SvImJ_T0077113.1 MGP_129S1SvImJ_G0030608.1 mouse_genomes_project 6 38931684 38945012 + MGP_129S1SvImJ_P0077113 Ssbp1 protein_coding protein_coding MGP_129S1SvImJ_T0077114.1 MGP_129S1SvImJ_G0030608.1 mouse_genomes_project 6 38931747 38938912 + MGP_129S1SvImJ_P0077114 Ssbp1 protein_coding protein_coding MGP_129S1SvImJ_T0077115.1 MGP_129S1SvImJ_G0030608.1 mouse_genomes_project 6 38931785 38934622 + Ssbp1 protein_coding retained_intron MGP_129S1SvImJ_T0077116.1 MGP_129S1SvImJ_G0030608.1 mouse_genomes_project 6 38931800 38941307 + MGP_129S1SvImJ_P0077116 Ssbp1 protein_coding protein_coding MGP_129S1SvImJ_T0077117.1 MGP_129S1SvImJ_G0030608.1 mouse_genomes_project 6 38931807 38941304 + MGP_129S1SvImJ_P0077117 Ssbp1 protein_coding protein_coding MGP_129S1SvImJ_T0077118.1 MGP_129S1SvImJ_G0030608.1 mouse_genomes_project 6 38931858 38936844 + MGP_129S1SvImJ_P0077118 Ssbp1 protein_coding protein_coding MGP_129S1SvImJ_T0077119.1 MGP_129S1SvImJ_G0030608.1 mouse_genomes_project 6 38936811 38937775 + Ssbp1 protein_coding retained_intron MGP_129S1SvImJ_T0079586.1 MGP_129S1SvImJ_G0031169.1 mouse_genomes_project 6 119179551 119191881 + MGP_129S1SvImJ_P0079586 protein_coding protein_coding MGP_129S1SvImJ_T0015495.1 MGP_129S1SvImJ_G0013584.1 mouse_genomes_project 6 86228977 86229555 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078847.1 MGP_129S1SvImJ_G0031032.1 mouse_genomes_project 6 91798022 91798961 + MGP_129S1SvImJ_P0078847 Vmn1r54 protein_coding protein_coding MGP_129S1SvImJ_T0078928.1 MGP_129S1SvImJ_G0031049.1 mouse_genomes_project 6 93115705 93122404 + MGP_129S1SvImJ_P0078928 Lsm3 protein_coding protein_coding MGP_129S1SvImJ_T0078929.1 MGP_129S1SvImJ_G0031049.1 mouse_genomes_project 6 93115734 93119616 + Lsm3 protein_coding retained_intron MGP_129S1SvImJ_T0078930.1 MGP_129S1SvImJ_G0031049.1 mouse_genomes_project 6 93115754 93117784 + Lsm3 protein_coding retained_intron MGP_129S1SvImJ_T0078931.1 MGP_129S1SvImJ_G0031049.1 mouse_genomes_project 6 93115824 93117295 + Lsm3 protein_coding retained_intron MGP_129S1SvImJ_T0078932.1 MGP_129S1SvImJ_G0031049.1 mouse_genomes_project 6 93115825 93122399 + MGP_129S1SvImJ_P0078932 Lsm3 protein_coding protein_coding MGP_129S1SvImJ_T0078497.1 MGP_129S1SvImJ_G0030966.1 mouse_genomes_project 6 87151892 87158656 - MGP_129S1SvImJ_P0078497 Nat8f1 protein_coding protein_coding MGP_129S1SvImJ_T0078498.1 MGP_129S1SvImJ_G0030966.1 mouse_genomes_project 6 87151900 87158635 - Nat8f1 protein_coding processed_transcript MGP_129S1SvImJ_T0078499.1 MGP_129S1SvImJ_G0030966.1 mouse_genomes_project 6 87153585 87158573 - MGP_129S1SvImJ_P0078499 Nat8f1 protein_coding protein_coding MGP_129S1SvImJ_T0077044.1 MGP_129S1SvImJ_G0030594.1 mouse_genomes_project 6 37492000 37564066 - MGP_129S1SvImJ_P0077044 Kdm7a protein_coding protein_coding MGP_129S1SvImJ_T0077045.1 MGP_129S1SvImJ_G0030594.1 mouse_genomes_project 6 37497513 37511081 - Kdm7a protein_coding processed_transcript MGP_129S1SvImJ_T0015484.1 MGP_129S1SvImJ_G0013573.1 mouse_genomes_project 6 84612249 84613147 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002083.1 MGP_129S1SvImJ_G0001996.1 mouse_genomes_project 6 89160901 89164908 - TEC TEC MGP_129S1SvImJ_T0080767.1 MGP_129S1SvImJ_G0031445.1 mouse_genomes_project 6 144494553 144638434 + MGP_129S1SvImJ_P0080767 Pik3c2g protein_coding protein_coding MGP_129S1SvImJ_T0015378.1 MGP_129S1SvImJ_G0013467.1 mouse_genomes_project 6 57137361 57137614 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080224.1 MGP_129S1SvImJ_G0031294.1 mouse_genomes_project 6 128652764 128662374 - MGP_129S1SvImJ_P0080224 Ltbr protein_coding protein_coding MGP_129S1SvImJ_T0080225.1 MGP_129S1SvImJ_G0031294.1 mouse_genomes_project 6 128656074 128656528 - Ltbr protein_coding retained_intron MGP_129S1SvImJ_T0080226.1 MGP_129S1SvImJ_G0031294.1 mouse_genomes_project 6 128661221 128661754 - Ltbr protein_coding retained_intron MGP_129S1SvImJ_T0015351.1 MGP_129S1SvImJ_G0013440.1 mouse_genomes_project 6 47316828 47317699 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000305.1 MGP_129S1SvImJ_G0000247.1 mouse_genomes_project 6 68292778 68293182 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0077125.1 MGP_129S1SvImJ_G0030613.1 mouse_genomes_project 6 39014692 39015753 + MGP_129S1SvImJ_P0077125 Olfr460 protein_coding protein_coding MGP_129S1SvImJ_T0000336.1 MGP_129S1SvImJ_G0000278.1 mouse_genomes_project 6 70031807 70032202 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0010797.1 MGP_129S1SvImJ_G0008913.1 mouse_genomes_project 6 84053394 84053457 + Mir7040 miRNA miRNA MGP_129S1SvImJ_T0008530.1 MGP_129S1SvImJ_G0006909.1 mouse_genomes_project 6 14601190 14601799 + Gm29591 lincRNA lincRNA MGP_129S1SvImJ_T0100003.1 MGP_129S1SvImJ_G0038070.1 mouse_genomes_project 6 65930740 65930840 - Gm23625 snRNA snRNA MGP_129S1SvImJ_T0099995.1 MGP_129S1SvImJ_G0038062.1 mouse_genomes_project 6 40852789 40852896 - Gm24611 snRNA snRNA MGP_129S1SvImJ_T0079493.1 MGP_129S1SvImJ_G0031154.1 mouse_genomes_project 6 118420159 118453897 + MGP_129S1SvImJ_P0079493 Cand2 protein_coding protein_coding MGP_129S1SvImJ_T0102609.1 MGP_129S1SvImJ_G0040442.1 mouse_genomes_project 6 56688607 56689444 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0000332.1 MGP_129S1SvImJ_G0000274.1 mouse_genomes_project 6 69652879 69653342 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0078880.1 MGP_129S1SvImJ_G0031041.1 mouse_genomes_project 6 92205638 92269500 - MGP_129S1SvImJ_P0078880 Iqsec1 protein_coding protein_coding MGP_129S1SvImJ_T0078881.1 MGP_129S1SvImJ_G0031041.1 mouse_genomes_project 6 92209104 92213526 - Iqsec1 protein_coding retained_intron MGP_129S1SvImJ_T0078882.1 MGP_129S1SvImJ_G0031041.1 mouse_genomes_project 6 92209104 92368312 - MGP_129S1SvImJ_P0078882 Iqsec1 protein_coding protein_coding MGP_129S1SvImJ_T0078883.1 MGP_129S1SvImJ_G0031041.1 mouse_genomes_project 6 92213865 92219881 - Iqsec1 protein_coding processed_transcript MGP_129S1SvImJ_T0078884.1 MGP_129S1SvImJ_G0031041.1 mouse_genomes_project 6 92214049 92219229 - Iqsec1 protein_coding processed_transcript MGP_129S1SvImJ_T0078885.1 MGP_129S1SvImJ_G0031041.1 mouse_genomes_project 6 92242910 92247798 - Iqsec1 protein_coding processed_transcript MGP_129S1SvImJ_T0078886.1 MGP_129S1SvImJ_G0031041.1 mouse_genomes_project 6 92243624 92317053 - MGP_129S1SvImJ_P0078886 Iqsec1 protein_coding protein_coding MGP_129S1SvImJ_T0078887.1 MGP_129S1SvImJ_G0031041.1 mouse_genomes_project 6 92243754 92289628 - Iqsec1 protein_coding processed_transcript MGP_129S1SvImJ_T0078888.1 MGP_129S1SvImJ_G0031041.1 mouse_genomes_project 6 92247700 92310485 - Iqsec1 protein_coding processed_transcript MGP_129S1SvImJ_T0008787.1 MGP_129S1SvImJ_G0007098.1 mouse_genomes_project 6 151686432 151696098 + 4930479D17Rik lincRNA lincRNA MGP_129S1SvImJ_T0098627.1 MGP_129S1SvImJ_G0036712.1 mouse_genomes_project 6 144859027 144859138 - Gm24174 rRNA rRNA MGP_129S1SvImJ_T0005063.1 MGP_129S1SvImJ_G0004325.1 mouse_genomes_project 6 96910451 96914058 - Kbtbd8os antisense antisense MGP_129S1SvImJ_T0080318.1 MGP_129S1SvImJ_G0031316.1 mouse_genomes_project 6 131223912 131305991 - MGP_129S1SvImJ_P0080318 Prmt8 protein_coding protein_coding MGP_129S1SvImJ_T0078753.1 MGP_129S1SvImJ_G0031012.1 mouse_genomes_project 6 89947973 90028112 - MGP_129S1SvImJ_P0078753 Kbtbd12 protein_coding protein_coding MGP_129S1SvImJ_T0078754.1 MGP_129S1SvImJ_G0031012.1 mouse_genomes_project 6 89947979 90019185 - MGP_129S1SvImJ_P0078754 Kbtbd12 protein_coding protein_coding MGP_129S1SvImJ_T0078755.1 MGP_129S1SvImJ_G0031012.1 mouse_genomes_project 6 89986781 89990905 - Kbtbd12 protein_coding retained_intron MGP_129S1SvImJ_T0078756.1 MGP_129S1SvImJ_G0031012.1 mouse_genomes_project 6 90014436 90028118 - Kbtbd12 protein_coding retained_intron MGP_129S1SvImJ_T0078757.1 MGP_129S1SvImJ_G0031012.1 mouse_genomes_project 6 90014715 90019206 - Kbtbd12 protein_coding processed_transcript MGP_129S1SvImJ_T0078758.1 MGP_129S1SvImJ_G0031012.1 mouse_genomes_project 6 90018119 90028115 - Kbtbd12 protein_coding retained_intron MGP_129S1SvImJ_T0078759.1 MGP_129S1SvImJ_G0031012.1 mouse_genomes_project 6 90019300 90038593 - MGP_129S1SvImJ_P0078759 Kbtbd12 protein_coding protein_coding MGP_129S1SvImJ_T0078454.1 MGP_129S1SvImJ_G0030951.1 mouse_genomes_project 6 86486033 86530860 - MGP_129S1SvImJ_P0078454 protein_coding protein_coding MGP_129S1SvImJ_T0078455.1 MGP_129S1SvImJ_G0030951.1 mouse_genomes_project 6 86486038 86530930 - MGP_129S1SvImJ_P0078455 protein_coding protein_coding MGP_129S1SvImJ_T0078456.1 MGP_129S1SvImJ_G0030951.1 mouse_genomes_project 6 86488699 86492709 - protein_coding processed_transcript MGP_129S1SvImJ_T0015539.1 MGP_129S1SvImJ_G0013628.1 mouse_genomes_project 6 105385786 105386223 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004949.1 MGP_129S1SvImJ_G0004251.1 mouse_genomes_project 6 32825910 32826145 - Npn2 antisense antisense MGP_129S1SvImJ_T0004950.1 MGP_129S1SvImJ_G0004251.1 mouse_genomes_project 6 32826069 32826144 - Npn2 antisense antisense MGP_129S1SvImJ_T0015563.1 MGP_129S1SvImJ_G0013652.1 mouse_genomes_project 6 115959251 115959660 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076780.1 MGP_129S1SvImJ_G0030544.1 mouse_genomes_project 6 28626363 28635134 + MGP_129S1SvImJ_P0076780 Mest protein_coding protein_coding MGP_129S1SvImJ_T0076781.1 MGP_129S1SvImJ_G0030544.1 mouse_genomes_project 6 28626363 28646838 + MGP_129S1SvImJ_P0076781 Mest protein_coding protein_coding MGP_129S1SvImJ_T0076782.1 MGP_129S1SvImJ_G0030544.1 mouse_genomes_project 6 28634387 28646842 + MGP_129S1SvImJ_P0076782 Mest protein_coding protein_coding MGP_129S1SvImJ_T0076783.1 MGP_129S1SvImJ_G0030544.1 mouse_genomes_project 6 28635873 28647100 + MGP_129S1SvImJ_P0076783 Mest protein_coding protein_coding MGP_129S1SvImJ_T0076784.1 MGP_129S1SvImJ_G0030544.1 mouse_genomes_project 6 28635925 28652726 + MGP_129S1SvImJ_P0076784 Mest protein_coding protein_coding MGP_129S1SvImJ_T0076785.1 MGP_129S1SvImJ_G0030544.1 mouse_genomes_project 6 28640531 28652726 + MGP_129S1SvImJ_P0076785 Mest protein_coding protein_coding MGP_129S1SvImJ_T0076786.1 MGP_129S1SvImJ_G0030544.1 mouse_genomes_project 6 28640534 28652729 + MGP_129S1SvImJ_P0076786 Mest protein_coding protein_coding MGP_129S1SvImJ_T0076787.1 MGP_129S1SvImJ_G0030544.1 mouse_genomes_project 6 28640536 28641360 + Mest protein_coding processed_transcript MGP_129S1SvImJ_T0076788.1 MGP_129S1SvImJ_G0030544.1 mouse_genomes_project 6 28645045 28647406 + Mest protein_coding retained_intron MGP_129S1SvImJ_T0076789.1 MGP_129S1SvImJ_G0030544.1 mouse_genomes_project 6 28646339 28647404 + Mest protein_coding retained_intron MGP_129S1SvImJ_T0076790.1 MGP_129S1SvImJ_G0030544.1 mouse_genomes_project 6 28646352 28647414 + Mest protein_coding retained_intron MGP_129S1SvImJ_T0101268.1 MGP_129S1SvImJ_G0039335.1 mouse_genomes_project 6 95618600 95618736 + Gm22840 snoRNA snoRNA MGP_129S1SvImJ_T0002080.1 MGP_129S1SvImJ_G0001993.1 mouse_genomes_project 6 88669344 88670126 - TEC TEC MGP_129S1SvImJ_T0079977.1 MGP_129S1SvImJ_G0031251.1 mouse_genomes_project 6 127046738 127086961 - MGP_129S1SvImJ_P0079977 Vmn2r26 protein_coding protein_coding MGP_129S1SvImJ_T0000203.1 MGP_129S1SvImJ_G0000158.1 mouse_genomes_project 6 70248474 70248761 - MGP_129S1SvImJ_P0000203 Igkv5-39 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000204.1 MGP_129S1SvImJ_G0000158.1 mouse_genomes_project 6 70248474 70249028 - MGP_129S1SvImJ_P0000204 Igkv5-39 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0008756.1 MGP_129S1SvImJ_G0007077.1 mouse_genomes_project 6 138660146 138681450 - Gm44448 lincRNA lincRNA MGP_129S1SvImJ_T0079110.1 MGP_129S1SvImJ_G0031082.1 mouse_genomes_project 6 101586645 101630933 - MGP_129S1SvImJ_P0079110 Eif4e3 protein_coding protein_coding MGP_129S1SvImJ_T0099988.1 MGP_129S1SvImJ_G0038055.1 mouse_genomes_project 6 27285113 27285219 - Gm26484 snRNA snRNA MGP_129S1SvImJ_T0010767.1 MGP_129S1SvImJ_G0008883.1 mouse_genomes_project 6 21714527 21714609 + Gm26386 miRNA miRNA MGP_129S1SvImJ_T0077889.1 MGP_129S1SvImJ_G0030835.1 mouse_genomes_project 6 65893127 65894533 + MGP_129S1SvImJ_P0077889 4930544G11Rik protein_coding protein_coding MGP_129S1SvImJ_T0101296.1 MGP_129S1SvImJ_G0039363.1 mouse_genomes_project 6 150363713 150363800 + Gm23498 snoRNA snoRNA MGP_129S1SvImJ_T0099990.1 MGP_129S1SvImJ_G0038057.1 mouse_genomes_project 6 31106820 31106924 - Gm22321 snRNA snRNA MGP_129S1SvImJ_T0077176.1 MGP_129S1SvImJ_G0030638.1 mouse_genomes_project 6 40477491 40481960 + MGP_129S1SvImJ_P0077176 Sval1 protein_coding protein_coding MGP_129S1SvImJ_T0002070.1 MGP_129S1SvImJ_G0001983.1 mouse_genomes_project 6 87786380 87789546 + TEC TEC MGP_129S1SvImJ_T0010824.1 MGP_129S1SvImJ_G0008940.1 mouse_genomes_project 6 124270981 124271060 - Gm24855 miRNA miRNA MGP_129S1SvImJ_T0015464.1 MGP_129S1SvImJ_G0013553.1 mouse_genomes_project 6 74486791 74486977 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002078.1 MGP_129S1SvImJ_G0001991.1 mouse_genomes_project 6 88519012 88521067 - TEC TEC MGP_129S1SvImJ_T0081055.1 MGP_129S1SvImJ_G0031498.1 mouse_genomes_project 6 152131372 152152877 + MGP_129S1SvImJ_P0081055 Klhl42 protein_coding protein_coding MGP_129S1SvImJ_T0081056.1 MGP_129S1SvImJ_G0031498.1 mouse_genomes_project 6 152145075 152147919 + Klhl42 protein_coding processed_transcript MGP_129S1SvImJ_T0081057.1 MGP_129S1SvImJ_G0031498.1 mouse_genomes_project 6 152147839 152150507 + MGP_129S1SvImJ_P0081057 Klhl42 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0015577.1 MGP_129S1SvImJ_G0013666.1 mouse_genomes_project 6 119674678 119675087 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015443.1 MGP_129S1SvImJ_G0013532.1 mouse_genomes_project 6 68601712 68603223 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004998.1 MGP_129S1SvImJ_G0004289.1 mouse_genomes_project 6 73201258 73211937 + Gm15401 antisense antisense MGP_129S1SvImJ_T0004999.1 MGP_129S1SvImJ_G0004289.1 mouse_genomes_project 6 73201807 73212820 + Gm15401 antisense antisense MGP_129S1SvImJ_T0005000.1 MGP_129S1SvImJ_G0004289.1 mouse_genomes_project 6 73211706 73213171 + Gm15401 antisense antisense MGP_129S1SvImJ_T0080989.1 MGP_129S1SvImJ_G0031486.1 mouse_genomes_project 6 151572007 151577031 - MGP_129S1SvImJ_P0080989 Asun protein_coding protein_coding MGP_129S1SvImJ_T0080990.1 MGP_129S1SvImJ_G0031486.1 mouse_genomes_project 6 151572007 151579720 - MGP_129S1SvImJ_P0080990 Asun protein_coding protein_coding MGP_129S1SvImJ_T0080991.1 MGP_129S1SvImJ_G0031486.1 mouse_genomes_project 6 151572007 151606348 - MGP_129S1SvImJ_P0080991 Asun protein_coding protein_coding MGP_129S1SvImJ_T0080992.1 MGP_129S1SvImJ_G0031486.1 mouse_genomes_project 6 151572016 151573755 - Asun protein_coding retained_intron MGP_129S1SvImJ_T0080993.1 MGP_129S1SvImJ_G0031486.1 mouse_genomes_project 6 151572306 151572777 - Asun protein_coding retained_intron MGP_129S1SvImJ_T0080994.1 MGP_129S1SvImJ_G0031486.1 mouse_genomes_project 6 151572469 151576431 - Asun protein_coding retained_intron MGP_129S1SvImJ_T0080995.1 MGP_129S1SvImJ_G0031486.1 mouse_genomes_project 6 151574881 151578632 - Asun protein_coding processed_transcript MGP_129S1SvImJ_T0080996.1 MGP_129S1SvImJ_G0031486.1 mouse_genomes_project 6 151576477 151577204 - Asun protein_coding retained_intron MGP_129S1SvImJ_T0080997.1 MGP_129S1SvImJ_G0031486.1 mouse_genomes_project 6 151577395 151604774 - MGP_129S1SvImJ_P0080997 Asun protein_coding protein_coding MGP_129S1SvImJ_T0080998.1 MGP_129S1SvImJ_G0031486.1 mouse_genomes_project 6 151585327 151588659 - Asun protein_coding retained_intron MGP_129S1SvImJ_T0080999.1 MGP_129S1SvImJ_G0031486.1 mouse_genomes_project 6 151600611 151606293 - Asun protein_coding retained_intron MGP_129S1SvImJ_T0078612.1 MGP_129S1SvImJ_G0030984.1 mouse_genomes_project 6 88175996 88337757 + MGP_129S1SvImJ_P0078612 Aak1 protein_coding protein_coding MGP_129S1SvImJ_T0078613.1 MGP_129S1SvImJ_G0030984.1 mouse_genomes_project 6 88176011 88264227 + MGP_129S1SvImJ_P0078613 Aak1 protein_coding protein_coding MGP_129S1SvImJ_T0078614.1 MGP_129S1SvImJ_G0030984.1 mouse_genomes_project 6 88176107 88279524 + Aak1 protein_coding retained_intron MGP_129S1SvImJ_T0078615.1 MGP_129S1SvImJ_G0030984.1 mouse_genomes_project 6 88176532 88325956 + MGP_129S1SvImJ_P0078615 Aak1 protein_coding protein_coding MGP_129S1SvImJ_T0078616.1 MGP_129S1SvImJ_G0030984.1 mouse_genomes_project 6 88176532 88321381 + MGP_129S1SvImJ_P0078616 Aak1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0078617.1 MGP_129S1SvImJ_G0030984.1 mouse_genomes_project 6 88177664 88264222 + Aak1 protein_coding processed_transcript MGP_129S1SvImJ_T0078618.1 MGP_129S1SvImJ_G0030984.1 mouse_genomes_project 6 88290225 88329988 + MGP_129S1SvImJ_P0078618 Aak1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078619.1 MGP_129S1SvImJ_G0030984.1 mouse_genomes_project 6 88300134 88330311 + Aak1 protein_coding processed_transcript MGP_129S1SvImJ_T0078620.1 MGP_129S1SvImJ_G0030984.1 mouse_genomes_project 6 88319356 88322121 + Aak1 protein_coding retained_intron MGP_129S1SvImJ_T0078621.1 MGP_129S1SvImJ_G0030984.1 mouse_genomes_project 6 88329102 88330767 + Aak1 protein_coding processed_transcript MGP_129S1SvImJ_T0080272.1 MGP_129S1SvImJ_G0031306.1 mouse_genomes_project 6 130330931 130352078 + MGP_129S1SvImJ_P0080272 Akap3 protein_coding protein_coding MGP_129S1SvImJ_T0080273.1 MGP_129S1SvImJ_G0031306.1 mouse_genomes_project 6 130330977 130352075 + MGP_129S1SvImJ_P0080273 Akap3 protein_coding protein_coding MGP_129S1SvImJ_T0080274.1 MGP_129S1SvImJ_G0031306.1 mouse_genomes_project 6 130330993 130352078 + MGP_129S1SvImJ_P0080274 Akap3 protein_coding protein_coding MGP_129S1SvImJ_T0078251.1 MGP_129S1SvImJ_G0030915.1 mouse_genomes_project 6 84081656 84082794 + MGP_129S1SvImJ_P0078251 Pcgf1 protein_coding protein_coding MGP_129S1SvImJ_T0078252.1 MGP_129S1SvImJ_G0030915.1 mouse_genomes_project 6 84082133 84084654 + MGP_129S1SvImJ_P0078252 Pcgf1 protein_coding protein_coding MGP_129S1SvImJ_T0078253.1 MGP_129S1SvImJ_G0030915.1 mouse_genomes_project 6 84082177 84084646 + MGP_129S1SvImJ_P0078253 Pcgf1 protein_coding protein_coding MGP_129S1SvImJ_T0078254.1 MGP_129S1SvImJ_G0030915.1 mouse_genomes_project 6 84082417 84084653 + MGP_129S1SvImJ_P0078254 Pcgf1 protein_coding protein_coding MGP_129S1SvImJ_T0078255.1 MGP_129S1SvImJ_G0030915.1 mouse_genomes_project 6 84082417 84084556 + MGP_129S1SvImJ_P0078255 Pcgf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078256.1 MGP_129S1SvImJ_G0030915.1 mouse_genomes_project 6 84082478 84084556 + MGP_129S1SvImJ_P0078256 Pcgf1 protein_coding protein_coding MGP_129S1SvImJ_T0078257.1 MGP_129S1SvImJ_G0030915.1 mouse_genomes_project 6 84082505 84083509 + Pcgf1 protein_coding retained_intron MGP_129S1SvImJ_T0078258.1 MGP_129S1SvImJ_G0030915.1 mouse_genomes_project 6 84083818 84084653 + Pcgf1 protein_coding retained_intron MGP_129S1SvImJ_T0101271.1 MGP_129S1SvImJ_G0039338.1 mouse_genomes_project 6 99651356 99651499 + Gm23703 snoRNA snoRNA MGP_129S1SvImJ_T0077161.1 MGP_129S1SvImJ_G0030633.1 mouse_genomes_project 6 40201462 40202749 + MGP_129S1SvImJ_P0077161 1700034O15Rik protein_coding protein_coding MGP_129S1SvImJ_T0099999.1 MGP_129S1SvImJ_G0038066.1 mouse_genomes_project 6 52754120 52754284 + Gm25818 snRNA snRNA MGP_129S1SvImJ_T0077955.1 MGP_129S1SvImJ_G0030855.1 mouse_genomes_project 6 71738287 71753233 + MGP_129S1SvImJ_P0077955 Krcc1 protein_coding protein_coding MGP_129S1SvImJ_T0077956.1 MGP_129S1SvImJ_G0030855.1 mouse_genomes_project 6 71738311 71752154 + MGP_129S1SvImJ_P0077956 Krcc1 protein_coding protein_coding MGP_129S1SvImJ_T0077957.1 MGP_129S1SvImJ_G0030855.1 mouse_genomes_project 6 71738627 71753233 + MGP_129S1SvImJ_P0077957 Krcc1 protein_coding protein_coding MGP_129S1SvImJ_T0077958.1 MGP_129S1SvImJ_G0030855.1 mouse_genomes_project 6 71750193 71753232 + MGP_129S1SvImJ_P0077958 Krcc1 protein_coding protein_coding MGP_129S1SvImJ_T0015678.1 MGP_129S1SvImJ_G0013767.1 mouse_genomes_project 6 151473547 151473829 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005073.1 MGP_129S1SvImJ_G0004332.1 mouse_genomes_project 6 110846687 110939485 - 0610040F04Rik antisense antisense MGP_129S1SvImJ_T0005074.1 MGP_129S1SvImJ_G0004332.1 mouse_genomes_project 6 110880170 110883830 - 0610040F04Rik antisense antisense MGP_129S1SvImJ_T0000178.1 MGP_129S1SvImJ_G0000135.1 mouse_genomes_project 6 68999513 69000069 - MGP_129S1SvImJ_P0000178 Igkv4-92 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0002140.1 MGP_129S1SvImJ_G0002053.1 mouse_genomes_project 6 115523028 115525152 - TEC TEC MGP_129S1SvImJ_T0002170.1 MGP_129S1SvImJ_G0002082.1 mouse_genomes_project 6 131739659 131741086 - TEC TEC MGP_129S1SvImJ_T0077177.1 MGP_129S1SvImJ_G0030639.1 mouse_genomes_project 6 40493964 40498915 + MGP_129S1SvImJ_P0077177 Sval3 protein_coding protein_coding MGP_129S1SvImJ_T0079612.1 MGP_129S1SvImJ_G0031178.1 mouse_genomes_project 6 120551555 120554894 + Zfp637 protein_coding retained_intron MGP_129S1SvImJ_T0079613.1 MGP_129S1SvImJ_G0031178.1 mouse_genomes_project 6 120551555 120555588 + MGP_129S1SvImJ_P0079613 Zfp637 protein_coding protein_coding MGP_129S1SvImJ_T0079614.1 MGP_129S1SvImJ_G0031178.1 mouse_genomes_project 6 120551556 120555895 + MGP_129S1SvImJ_P0079614 Zfp637 protein_coding protein_coding MGP_129S1SvImJ_T0079615.1 MGP_129S1SvImJ_G0031178.1 mouse_genomes_project 6 120551617 120556331 + MGP_129S1SvImJ_P0079615 Zfp637 protein_coding protein_coding MGP_129S1SvImJ_T0079616.1 MGP_129S1SvImJ_G0031178.1 mouse_genomes_project 6 120551621 120556332 + MGP_129S1SvImJ_P0079616 Zfp637 protein_coding protein_coding MGP_129S1SvImJ_T0079617.1 MGP_129S1SvImJ_G0031178.1 mouse_genomes_project 6 120551643 120555789 + MGP_129S1SvImJ_P0079617 Zfp637 protein_coding protein_coding MGP_129S1SvImJ_T0079618.1 MGP_129S1SvImJ_G0031178.1 mouse_genomes_project 6 120551643 120555789 + MGP_129S1SvImJ_P0079618 Zfp637 protein_coding protein_coding MGP_129S1SvImJ_T0079619.1 MGP_129S1SvImJ_G0031178.1 mouse_genomes_project 6 120551656 120556332 + MGP_129S1SvImJ_P0079619 Zfp637 protein_coding protein_coding MGP_129S1SvImJ_T0079620.1 MGP_129S1SvImJ_G0031178.1 mouse_genomes_project 6 120551656 120555789 + MGP_129S1SvImJ_P0079620 Zfp637 protein_coding protein_coding MGP_129S1SvImJ_T0079621.1 MGP_129S1SvImJ_G0031178.1 mouse_genomes_project 6 120553628 120555951 + Zfp637 protein_coding retained_intron MGP_129S1SvImJ_T0077046.1 MGP_129S1SvImJ_G0030595.1 mouse_genomes_project 6 37703602 37751260 - MGP_129S1SvImJ_P0077046 Slc37a3 protein_coding protein_coding MGP_129S1SvImJ_T0077047.1 MGP_129S1SvImJ_G0030595.1 mouse_genomes_project 6 37704814 37751257 - MGP_129S1SvImJ_P0077047 Slc37a3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077048.1 MGP_129S1SvImJ_G0030595.1 mouse_genomes_project 6 37704815 37719085 - Slc37a3 protein_coding processed_transcript MGP_129S1SvImJ_T0077049.1 MGP_129S1SvImJ_G0030595.1 mouse_genomes_project 6 37704818 37746515 - MGP_129S1SvImJ_P0077049 Slc37a3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077050.1 MGP_129S1SvImJ_G0030595.1 mouse_genomes_project 6 37705435 37718481 - Slc37a3 protein_coding processed_transcript MGP_129S1SvImJ_T0077051.1 MGP_129S1SvImJ_G0030595.1 mouse_genomes_project 6 37715012 37718453 - Slc37a3 protein_coding retained_intron MGP_129S1SvImJ_T0077052.1 MGP_129S1SvImJ_G0030595.1 mouse_genomes_project 6 37726075 37751244 - MGP_129S1SvImJ_P0077052 Slc37a3 protein_coding protein_coding MGP_129S1SvImJ_T0077053.1 MGP_129S1SvImJ_G0030595.1 mouse_genomes_project 6 37728554 37751257 - MGP_129S1SvImJ_P0077053 Slc37a3 protein_coding protein_coding MGP_129S1SvImJ_T0077054.1 MGP_129S1SvImJ_G0030595.1 mouse_genomes_project 6 37731733 37751232 - MGP_129S1SvImJ_P0077054 Slc37a3 protein_coding protein_coding MGP_129S1SvImJ_T0077055.1 MGP_129S1SvImJ_G0030595.1 mouse_genomes_project 6 37731758 37751221 - MGP_129S1SvImJ_P0077055 Slc37a3 protein_coding protein_coding MGP_129S1SvImJ_T0077056.1 MGP_129S1SvImJ_G0030595.1 mouse_genomes_project 6 37731760 37751247 - MGP_129S1SvImJ_P0077056 Slc37a3 protein_coding protein_coding MGP_129S1SvImJ_T0077057.1 MGP_129S1SvImJ_G0030595.1 mouse_genomes_project 6 37739528 37751242 - MGP_129S1SvImJ_P0077057 Slc37a3 protein_coding protein_coding MGP_129S1SvImJ_T0077058.1 MGP_129S1SvImJ_G0030595.1 mouse_genomes_project 6 37740298 37751224 - Slc37a3 protein_coding processed_transcript MGP_129S1SvImJ_T0077059.1 MGP_129S1SvImJ_G0030595.1 mouse_genomes_project 6 37740307 37751203 - Slc37a3 protein_coding processed_transcript MGP_129S1SvImJ_T0008627.1 MGP_129S1SvImJ_G0006975.1 mouse_genomes_project 6 60247032 60247522 + Gm44410 lincRNA lincRNA MGP_129S1SvImJ_T0015323.1 MGP_129S1SvImJ_G0013412.1 mouse_genomes_project 6 36665802 36666473 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081020.1 MGP_129S1SvImJ_G0031491.1 mouse_genomes_project 6 151823478 151832977 + Arntl2 protein_coding processed_transcript MGP_129S1SvImJ_T0081021.1 MGP_129S1SvImJ_G0031491.1 mouse_genomes_project 6 151823488 151861976 + MGP_129S1SvImJ_P0081021 Arntl2 protein_coding protein_coding MGP_129S1SvImJ_T0081022.1 MGP_129S1SvImJ_G0031491.1 mouse_genomes_project 6 151832928 151860965 + MGP_129S1SvImJ_P0081022 Arntl2 protein_coding protein_coding MGP_129S1SvImJ_T0081023.1 MGP_129S1SvImJ_G0031491.1 mouse_genomes_project 6 151832928 151860965 + MGP_129S1SvImJ_P0081023 Arntl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081024.1 MGP_129S1SvImJ_G0031491.1 mouse_genomes_project 6 151832928 151860965 + MGP_129S1SvImJ_P0081024 Arntl2 protein_coding protein_coding MGP_129S1SvImJ_T0081025.1 MGP_129S1SvImJ_G0031491.1 mouse_genomes_project 6 151832928 151860965 + MGP_129S1SvImJ_P0081025 Arntl2 protein_coding protein_coding MGP_129S1SvImJ_T0081026.1 MGP_129S1SvImJ_G0031491.1 mouse_genomes_project 6 151846869 151849589 + Arntl2 protein_coding retained_intron MGP_129S1SvImJ_T0081027.1 MGP_129S1SvImJ_G0031491.1 mouse_genomes_project 6 151849047 151850334 + Arntl2 protein_coding retained_intron MGP_129S1SvImJ_T0081028.1 MGP_129S1SvImJ_G0031491.1 mouse_genomes_project 6 151858847 151861969 + Arntl2 protein_coding retained_intron MGP_129S1SvImJ_T0015677.1 MGP_129S1SvImJ_G0013766.1 mouse_genomes_project 6 150306059 150307055 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011675.1 MGP_129S1SvImJ_G0009791.1 mouse_genomes_project 6 84601567 84601890 - Gm24990 misc_RNA misc_RNA MGP_129S1SvImJ_T0079013.1 MGP_129S1SvImJ_G0031065.1 mouse_genomes_project 6 96371807 96469231 - MGP_129S1SvImJ_P0079013 Lrig1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079014.1 MGP_129S1SvImJ_G0031065.1 mouse_genomes_project 6 96371812 96469218 - MGP_129S1SvImJ_P0079014 Lrig1 protein_coding protein_coding MGP_129S1SvImJ_T0079015.1 MGP_129S1SvImJ_G0031065.1 mouse_genomes_project 6 96371814 96469210 - MGP_129S1SvImJ_P0079015 Lrig1 protein_coding protein_coding MGP_129S1SvImJ_T0079016.1 MGP_129S1SvImJ_G0031065.1 mouse_genomes_project 6 96371957 96372671 - Lrig1 protein_coding processed_transcript MGP_129S1SvImJ_T0079017.1 MGP_129S1SvImJ_G0031065.1 mouse_genomes_project 6 96392280 96449709 - Lrig1 protein_coding processed_transcript MGP_129S1SvImJ_T0079018.1 MGP_129S1SvImJ_G0031065.1 mouse_genomes_project 6 96393696 96424413 - Lrig1 protein_coding processed_transcript MGP_129S1SvImJ_T0079019.1 MGP_129S1SvImJ_G0031065.1 mouse_genomes_project 6 96395321 96447945 - Lrig1 protein_coding processed_transcript MGP_129S1SvImJ_T0015554.1 MGP_129S1SvImJ_G0013643.1 mouse_genomes_project 6 112366879 112367423 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002004.1 MGP_129S1SvImJ_G0001917.1 mouse_genomes_project 6 48255207 48256747 + TEC TEC MGP_129S1SvImJ_T0080508.1 MGP_129S1SvImJ_G0031372.1 mouse_genomes_project 6 135620711 135621743 - MGP_129S1SvImJ_P0080508 Tas2r107 protein_coding protein_coding MGP_129S1SvImJ_T0008798.1 MGP_129S1SvImJ_G0007105.1 mouse_genomes_project 6 153757052 153773939 - 4930528G23Rik lincRNA lincRNA MGP_129S1SvImJ_T0077816.1 MGP_129S1SvImJ_G0030819.1 mouse_genomes_project 6 58535805 58537649 - MGP_129S1SvImJ_P0077816 Nap1l5 protein_coding protein_coding MGP_129S1SvImJ_T0077817.1 MGP_129S1SvImJ_G0030819.1 mouse_genomes_project 6 58536376 58537246 - MGP_129S1SvImJ_P0077817 Nap1l5 protein_coding protein_coding MGP_129S1SvImJ_T0078326.1 MGP_129S1SvImJ_G0030930.1 mouse_genomes_project 6 84355030 84364280 + MGP_129S1SvImJ_P0078326 Bola3 protein_coding protein_coding MGP_129S1SvImJ_T0078327.1 MGP_129S1SvImJ_G0030930.1 mouse_genomes_project 6 84355099 84364255 + MGP_129S1SvImJ_P0078327 Bola3 protein_coding protein_coding MGP_129S1SvImJ_T0078328.1 MGP_129S1SvImJ_G0030930.1 mouse_genomes_project 6 84355329 84366020 + MGP_129S1SvImJ_P0078328 Bola3 protein_coding protein_coding MGP_129S1SvImJ_T0078329.1 MGP_129S1SvImJ_G0030930.1 mouse_genomes_project 6 84355374 84356284 + Bola3 protein_coding processed_transcript MGP_129S1SvImJ_T0078330.1 MGP_129S1SvImJ_G0030930.1 mouse_genomes_project 6 84355403 84359082 + Bola3 protein_coding retained_intron MGP_129S1SvImJ_T0078331.1 MGP_129S1SvImJ_G0030930.1 mouse_genomes_project 6 84356923 84359093 + Bola3 protein_coding retained_intron MGP_129S1SvImJ_T0078332.1 MGP_129S1SvImJ_G0030930.1 mouse_genomes_project 6 84356923 84364300 + Bola3 protein_coding retained_intron MGP_129S1SvImJ_T0078333.1 MGP_129S1SvImJ_G0030930.1 mouse_genomes_project 6 84357978 84364217 + Bola3 protein_coding processed_transcript MGP_129S1SvImJ_T0078334.1 MGP_129S1SvImJ_G0030930.1 mouse_genomes_project 6 84359197 84365131 + Bola3 protein_coding processed_transcript MGP_129S1SvImJ_T0002607.1 MGP_129S1SvImJ_G0002508.1 mouse_genomes_project 6 40052457 40052505 + TR_J_pseudogene TR_J_pseudogene MGP_129S1SvImJ_T0077601.1 MGP_129S1SvImJ_G0030755.1 mouse_genomes_project 6 52601677 52716627 + 9430076C15Rik protein_coding retained_intron MGP_129S1SvImJ_T0077602.1 MGP_129S1SvImJ_G0030755.1 mouse_genomes_project 6 52601677 53027315 + MGP_129S1SvImJ_P0077602 9430076C15Rik protein_coding protein_coding MGP_129S1SvImJ_T0077603.1 MGP_129S1SvImJ_G0030755.1 mouse_genomes_project 6 52601693 52720825 + 9430076C15Rik protein_coding processed_transcript MGP_129S1SvImJ_T0077604.1 MGP_129S1SvImJ_G0030755.1 mouse_genomes_project 6 52601702 52723329 + 9430076C15Rik protein_coding processed_transcript MGP_129S1SvImJ_T0077605.1 MGP_129S1SvImJ_G0030755.1 mouse_genomes_project 6 52601725 52603127 + 9430076C15Rik protein_coding processed_transcript MGP_129S1SvImJ_T0077606.1 MGP_129S1SvImJ_G0030755.1 mouse_genomes_project 6 52601725 52971965 + 9430076C15Rik protein_coding processed_transcript MGP_129S1SvImJ_T0077607.1 MGP_129S1SvImJ_G0030755.1 mouse_genomes_project 6 52601725 52714048 + 9430076C15Rik protein_coding processed_transcript MGP_129S1SvImJ_T0077608.1 MGP_129S1SvImJ_G0030755.1 mouse_genomes_project 6 52601725 52934944 + 9430076C15Rik protein_coding retained_intron MGP_129S1SvImJ_T0077609.1 MGP_129S1SvImJ_G0030755.1 mouse_genomes_project 6 52601728 52734648 + 9430076C15Rik protein_coding processed_transcript MGP_129S1SvImJ_T0077610.1 MGP_129S1SvImJ_G0030755.1 mouse_genomes_project 6 52604842 53021773 + MGP_129S1SvImJ_P0077610 9430076C15Rik protein_coding protein_coding MGP_129S1SvImJ_T0077611.1 MGP_129S1SvImJ_G0030755.1 mouse_genomes_project 6 52626920 53021773 + MGP_129S1SvImJ_P0077611 9430076C15Rik protein_coding protein_coding MGP_129S1SvImJ_T0077612.1 MGP_129S1SvImJ_G0030755.1 mouse_genomes_project 6 52896093 53027306 + MGP_129S1SvImJ_P0077612 9430076C15Rik protein_coding protein_coding MGP_129S1SvImJ_T0077613.1 MGP_129S1SvImJ_G0030755.1 mouse_genomes_project 6 52896168 52936435 + 9430076C15Rik protein_coding retained_intron MGP_129S1SvImJ_T0077614.1 MGP_129S1SvImJ_G0030755.1 mouse_genomes_project 6 52896169 52933290 + MGP_129S1SvImJ_P0077614 9430076C15Rik protein_coding protein_coding MGP_129S1SvImJ_T0000045.1 MGP_129S1SvImJ_G0000038.1 mouse_genomes_project 6 71137058 71137101 + Igkj2 IG_J_gene processed_transcript MGP_129S1SvImJ_T0000046.1 MGP_129S1SvImJ_G0000038.1 mouse_genomes_project 6 71137058 71137097 + MGP_129S1SvImJ_P0000046 Igkj2 IG_J_gene IG_J_gene MGP_129S1SvImJ_T0002084.1 MGP_129S1SvImJ_G0001997.1 mouse_genomes_project 6 89173444 89174309 - TEC TEC MGP_129S1SvImJ_T0077567.1 MGP_129S1SvImJ_G0030747.1 mouse_genomes_project 6 51464259 51468526 - MGP_129S1SvImJ_P0077567 Hoxa9 protein_coding protein_coding MGP_129S1SvImJ_T0077568.1 MGP_129S1SvImJ_G0030747.1 mouse_genomes_project 6 51465121 51472260 - Hoxa9 protein_coding processed_transcript MGP_129S1SvImJ_T0077569.1 MGP_129S1SvImJ_G0030747.1 mouse_genomes_project 6 51465278 51467344 - MGP_129S1SvImJ_P0077569 Hoxa9 protein_coding protein_coding MGP_129S1SvImJ_T0077570.1 MGP_129S1SvImJ_G0030747.1 mouse_genomes_project 6 51465480 51471455 - Hoxa9 protein_coding processed_transcript MGP_129S1SvImJ_T0077571.1 MGP_129S1SvImJ_G0030747.1 mouse_genomes_project 6 51469422 51471704 - Hoxa9 protein_coding retained_intron MGP_129S1SvImJ_T0015332.1 MGP_129S1SvImJ_G0013421.1 mouse_genomes_project 6 39997597 39998044 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078836.1 MGP_129S1SvImJ_G0031024.1 mouse_genomes_project 6 91347196 91348265 - MGP_129S1SvImJ_P0078836 Vmn1r43 protein_coding protein_coding MGP_129S1SvImJ_T0005092.1 MGP_129S1SvImJ_G0004346.1 mouse_genomes_project 6 122391321 122398435 + Gm44317 antisense antisense MGP_129S1SvImJ_T0079381.1 MGP_129S1SvImJ_G0031135.1 mouse_genomes_project 6 116242747 116257208 + MGP_129S1SvImJ_P0079381 Tatdn2 protein_coding protein_coding MGP_129S1SvImJ_T0079382.1 MGP_129S1SvImJ_G0031135.1 mouse_genomes_project 6 116243261 116257088 + MGP_129S1SvImJ_P0079382 Tatdn2 protein_coding protein_coding MGP_129S1SvImJ_T0079383.1 MGP_129S1SvImJ_G0031135.1 mouse_genomes_project 6 116243370 116256344 + MGP_129S1SvImJ_P0079383 Tatdn2 protein_coding protein_coding MGP_129S1SvImJ_T0079384.1 MGP_129S1SvImJ_G0031135.1 mouse_genomes_project 6 116250958 116257205 + MGP_129S1SvImJ_P0079384 Tatdn2 protein_coding protein_coding MGP_129S1SvImJ_T0079385.1 MGP_129S1SvImJ_G0031135.1 mouse_genomes_project 6 116253414 116256588 + MGP_129S1SvImJ_P0079385 Tatdn2 protein_coding protein_coding MGP_129S1SvImJ_T0102628.1 MGP_129S1SvImJ_G0040461.1 mouse_genomes_project 6 74044538 74045443 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0080208.1 MGP_129S1SvImJ_G0031290.1 mouse_genomes_project 6 128526568 128528326 + Mrpl51 protein_coding processed_transcript MGP_129S1SvImJ_T0080209.1 MGP_129S1SvImJ_G0031290.1 mouse_genomes_project 6 128526932 128531855 + MGP_129S1SvImJ_P0080209 Mrpl51 protein_coding protein_coding MGP_129S1SvImJ_T0080210.1 MGP_129S1SvImJ_G0031290.1 mouse_genomes_project 6 128526984 128527646 + Mrpl51 protein_coding retained_intron MGP_129S1SvImJ_T0002212.1 MGP_129S1SvImJ_G0002124.1 mouse_genomes_project 6 154005384 154006888 - TEC TEC MGP_129S1SvImJ_T0002039.1 MGP_129S1SvImJ_G0001952.1 mouse_genomes_project 6 73837528 73840161 + TEC TEC MGP_129S1SvImJ_T0102658.1 MGP_129S1SvImJ_G0040491.1 mouse_genomes_project 6 137178514 137179607 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0076468.1 MGP_129S1SvImJ_G0030484.1 mouse_genomes_project 6 19809673 19860397 - MGP_129S1SvImJ_P0076468 Fam3c protein_coding protein_coding MGP_129S1SvImJ_T0076469.1 MGP_129S1SvImJ_G0030484.1 mouse_genomes_project 6 19811036 19860323 - MGP_129S1SvImJ_P0076469 Fam3c protein_coding protein_coding MGP_129S1SvImJ_T0076470.1 MGP_129S1SvImJ_G0030484.1 mouse_genomes_project 6 19811614 19832597 - Fam3c protein_coding processed_transcript MGP_129S1SvImJ_T0076471.1 MGP_129S1SvImJ_G0030484.1 mouse_genomes_project 6 19812481 19860298 - MGP_129S1SvImJ_P0076471 Fam3c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076472.1 MGP_129S1SvImJ_G0030484.1 mouse_genomes_project 6 19825442 19848138 - MGP_129S1SvImJ_P0076472 Fam3c protein_coding protein_coding MGP_129S1SvImJ_T0000321.1 MGP_129S1SvImJ_G0000263.1 mouse_genomes_project 6 69008855 69009266 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0098991.1 MGP_129S1SvImJ_G0037065.1 mouse_genomes_project 6 128519054 128519335 - Gm28967 sense_intronic sense_intronic MGP_129S1SvImJ_T0015496.1 MGP_129S1SvImJ_G0013585.1 mouse_genomes_project 6 86279622 86280562 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101294.1 MGP_129S1SvImJ_G0039361.1 mouse_genomes_project 6 148334754 148334883 - Gm23272 snoRNA snoRNA MGP_129S1SvImJ_T0005012.1 MGP_129S1SvImJ_G0004298.1 mouse_genomes_project 6 84172894 84179484 - Gm15624 antisense antisense MGP_129S1SvImJ_T0005013.1 MGP_129S1SvImJ_G0004298.1 mouse_genomes_project 6 84176090 84179506 - Gm15624 antisense antisense MGP_129S1SvImJ_T0005014.1 MGP_129S1SvImJ_G0004298.1 mouse_genomes_project 6 84176542 84179305 - Gm15624 antisense antisense MGP_129S1SvImJ_T0015262.1 MGP_129S1SvImJ_G0013351.1 mouse_genomes_project 6 4539203 4539840 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005652.1 MGP_129S1SvImJ_G0004761.1 mouse_genomes_project 6 118312607 118314420 + D830050J10Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0005653.1 MGP_129S1SvImJ_G0004761.1 mouse_genomes_project 6 118312634 118313776 + D830050J10Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0008631.1 MGP_129S1SvImJ_G0006979.1 mouse_genomes_project 6 66400823 66408607 - lincRNA lincRNA MGP_129S1SvImJ_T0008632.1 MGP_129S1SvImJ_G0006979.1 mouse_genomes_project 6 66403068 66408646 - lincRNA lincRNA MGP_129S1SvImJ_T0005107.1 MGP_129S1SvImJ_G0004360.1 mouse_genomes_project 6 130297675 130300476 + Gm42574 antisense antisense MGP_129S1SvImJ_T0098761.1 MGP_129S1SvImJ_G0036846.1 mouse_genomes_project 6 52308223 52308362 - Gm26215 scaRNA scaRNA MGP_129S1SvImJ_T0015315.1 MGP_129S1SvImJ_G0013404.1 mouse_genomes_project 6 32914550 32914747 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076235.1 MGP_129S1SvImJ_G0030443.1 mouse_genomes_project 6 4451666 4461594 + MGP_129S1SvImJ_P0076235 Tac1 protein_coding protein_coding MGP_129S1SvImJ_T0076236.1 MGP_129S1SvImJ_G0030443.1 mouse_genomes_project 6 4451814 4461599 + MGP_129S1SvImJ_P0076236 Tac1 protein_coding protein_coding MGP_129S1SvImJ_T0076237.1 MGP_129S1SvImJ_G0030443.1 mouse_genomes_project 6 4451862 4461593 + MGP_129S1SvImJ_P0076237 Tac1 protein_coding protein_coding MGP_129S1SvImJ_T0076238.1 MGP_129S1SvImJ_G0030443.1 mouse_genomes_project 6 4460984 4464453 + Tac1 protein_coding processed_transcript MGP_129S1SvImJ_T0077915.1 MGP_129S1SvImJ_G0030844.1 mouse_genomes_project 6 67221631 67258881 + Serbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0077916.1 MGP_129S1SvImJ_G0030844.1 mouse_genomes_project 6 67254233 67285319 + MGP_129S1SvImJ_P0077916 Serbp1 protein_coding protein_coding MGP_129S1SvImJ_T0077917.1 MGP_129S1SvImJ_G0030844.1 mouse_genomes_project 6 67254592 67271914 + MGP_129S1SvImJ_P0077917 Serbp1 protein_coding protein_coding MGP_129S1SvImJ_T0077918.1 MGP_129S1SvImJ_G0030844.1 mouse_genomes_project 6 67254597 67256964 + Serbp1 protein_coding retained_intron MGP_129S1SvImJ_T0077919.1 MGP_129S1SvImJ_G0030844.1 mouse_genomes_project 6 67254614 67271674 + MGP_129S1SvImJ_P0077919 Serbp1 protein_coding protein_coding MGP_129S1SvImJ_T0077920.1 MGP_129S1SvImJ_G0030844.1 mouse_genomes_project 6 67254619 67271656 + MGP_129S1SvImJ_P0077920 Serbp1 protein_coding protein_coding MGP_129S1SvImJ_T0077921.1 MGP_129S1SvImJ_G0030844.1 mouse_genomes_project 6 67254620 67261619 + Serbp1 protein_coding retained_intron MGP_129S1SvImJ_T0077922.1 MGP_129S1SvImJ_G0030844.1 mouse_genomes_project 6 67254620 67271656 + MGP_129S1SvImJ_P0077922 Serbp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077923.1 MGP_129S1SvImJ_G0030844.1 mouse_genomes_project 6 67254620 67271919 + MGP_129S1SvImJ_P0077923 Serbp1 protein_coding protein_coding MGP_129S1SvImJ_T0077924.1 MGP_129S1SvImJ_G0030844.1 mouse_genomes_project 6 67254625 67262214 + Serbp1 protein_coding retained_intron MGP_129S1SvImJ_T0077925.1 MGP_129S1SvImJ_G0030844.1 mouse_genomes_project 6 67254647 67265390 + MGP_129S1SvImJ_P0077925 Serbp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077926.1 MGP_129S1SvImJ_G0030844.1 mouse_genomes_project 6 67254680 67271623 + MGP_129S1SvImJ_P0077926 Serbp1 protein_coding protein_coding MGP_129S1SvImJ_T0077927.1 MGP_129S1SvImJ_G0030844.1 mouse_genomes_project 6 67254688 67259849 + Serbp1 protein_coding retained_intron MGP_129S1SvImJ_T0077928.1 MGP_129S1SvImJ_G0030844.1 mouse_genomes_project 6 67254866 67260464 + MGP_129S1SvImJ_P0077928 Serbp1 protein_coding protein_coding MGP_129S1SvImJ_T0077929.1 MGP_129S1SvImJ_G0030844.1 mouse_genomes_project 6 67254939 67269413 + MGP_129S1SvImJ_P0077929 Serbp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077930.1 MGP_129S1SvImJ_G0030844.1 mouse_genomes_project 6 67259487 67269430 + Serbp1 protein_coding retained_intron MGP_129S1SvImJ_T0002086.1 MGP_129S1SvImJ_G0001999.1 mouse_genomes_project 6 89223839 89224926 + TEC TEC MGP_129S1SvImJ_T0005019.1 MGP_129S1SvImJ_G0004300.1 mouse_genomes_project 6 84796026 84797136 - 1700124L16Rik antisense antisense MGP_129S1SvImJ_T0005020.1 MGP_129S1SvImJ_G0004300.1 mouse_genomes_project 6 84796026 84797113 - 1700124L16Rik antisense antisense MGP_129S1SvImJ_T0005021.1 MGP_129S1SvImJ_G0004300.1 mouse_genomes_project 6 84796026 84796779 - 1700124L16Rik antisense antisense MGP_129S1SvImJ_T0008544.1 MGP_129S1SvImJ_G0006919.1 mouse_genomes_project 6 28967557 28967961 - Gm27019 lincRNA lincRNA MGP_129S1SvImJ_T0011685.1 MGP_129S1SvImJ_G0009801.1 mouse_genomes_project 6 114421471 114421786 + Gm26362 misc_RNA misc_RNA MGP_129S1SvImJ_T0015635.1 MGP_129S1SvImJ_G0013724.1 mouse_genomes_project 6 133889380 133889494 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080659.1 MGP_129S1SvImJ_G0031426.1 mouse_genomes_project 6 141274106 141290385 - MGP_129S1SvImJ_P0080659 Wbp11 protein_coding protein_coding MGP_129S1SvImJ_T0080660.1 MGP_129S1SvImJ_G0031426.1 mouse_genomes_project 6 141278449 141282842 - MGP_129S1SvImJ_P0080660 Wbp11 protein_coding protein_coding MGP_129S1SvImJ_T0080661.1 MGP_129S1SvImJ_G0031426.1 mouse_genomes_project 6 141278674 141290288 - MGP_129S1SvImJ_P0080661 Wbp11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080662.1 MGP_129S1SvImJ_G0031426.1 mouse_genomes_project 6 141281364 141290295 - Wbp11 protein_coding retained_intron MGP_129S1SvImJ_T0080663.1 MGP_129S1SvImJ_G0031426.1 mouse_genomes_project 6 141286700 141290287 - Wbp11 protein_coding retained_intron MGP_129S1SvImJ_T0080664.1 MGP_129S1SvImJ_G0031426.1 mouse_genomes_project 6 141287450 141288438 - Wbp11 protein_coding retained_intron MGP_129S1SvImJ_T0080665.1 MGP_129S1SvImJ_G0031426.1 mouse_genomes_project 6 141287858 141289888 - MGP_129S1SvImJ_P0080665 Wbp11 protein_coding protein_coding MGP_129S1SvImJ_T0008731.1 MGP_129S1SvImJ_G0007057.1 mouse_genomes_project 6 122735551 122742026 - 4930540M05Rik lincRNA lincRNA MGP_129S1SvImJ_T0000297.1 MGP_129S1SvImJ_G0000239.1 mouse_genomes_project 6 67734323 67734778 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0000324.1 MGP_129S1SvImJ_G0000266.1 mouse_genomes_project 6 69157786 69158072 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0004954.1 MGP_129S1SvImJ_G0004255.1 mouse_genomes_project 6 37415641 37419362 - 1700025N23Rik antisense antisense MGP_129S1SvImJ_T0000202.1 MGP_129S1SvImJ_G0000157.1 mouse_genomes_project 6 70205122 70205587 - MGP_129S1SvImJ_P0000202 Igkv12-41 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0015427.1 MGP_129S1SvImJ_G0013516.1 mouse_genomes_project 6 67202441 67203084 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011647.1 MGP_129S1SvImJ_G0009763.1 mouse_genomes_project 6 14956649 14956905 + Gm27542 misc_RNA misc_RNA MGP_129S1SvImJ_T0076582.1 MGP_129S1SvImJ_G0030514.1 mouse_genomes_project 6 26888196 26930769 - MGP_129S1SvImJ_P0076582 Rbm28 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0076583.1 MGP_129S1SvImJ_G0030514.1 mouse_genomes_project 6 26888206 26931123 - MGP_129S1SvImJ_P0076583 Rbm28 protein_coding protein_coding MGP_129S1SvImJ_T0076584.1 MGP_129S1SvImJ_G0030514.1 mouse_genomes_project 6 26889767 26921156 - Rbm28 protein_coding retained_intron MGP_129S1SvImJ_T0076585.1 MGP_129S1SvImJ_G0030514.1 mouse_genomes_project 6 26889801 26895859 - MGP_129S1SvImJ_P0076585 Rbm28 protein_coding protein_coding MGP_129S1SvImJ_T0076586.1 MGP_129S1SvImJ_G0030514.1 mouse_genomes_project 6 26892234 26930769 - MGP_129S1SvImJ_P0076586 Rbm28 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0076587.1 MGP_129S1SvImJ_G0030514.1 mouse_genomes_project 6 26901983 26918915 - Rbm28 protein_coding retained_intron MGP_129S1SvImJ_T0076588.1 MGP_129S1SvImJ_G0030514.1 mouse_genomes_project 6 26922744 26926271 - Rbm28 protein_coding retained_intron MGP_129S1SvImJ_T0076589.1 MGP_129S1SvImJ_G0030514.1 mouse_genomes_project 6 26923204 26926046 - Rbm28 protein_coding retained_intron MGP_129S1SvImJ_T0008502.1 MGP_129S1SvImJ_G0006893.1 mouse_genomes_project 6 3143459 3177283 + Gm20619 lincRNA lincRNA MGP_129S1SvImJ_T0008503.1 MGP_129S1SvImJ_G0006893.1 mouse_genomes_project 6 3143487 3268007 + Gm20619 lincRNA lincRNA MGP_129S1SvImJ_T0008504.1 MGP_129S1SvImJ_G0006893.1 mouse_genomes_project 6 3143490 3283765 + Gm20619 lincRNA lincRNA MGP_129S1SvImJ_T0008505.1 MGP_129S1SvImJ_G0006893.1 mouse_genomes_project 6 3143518 3177279 + Gm20619 lincRNA lincRNA MGP_129S1SvImJ_T0008506.1 MGP_129S1SvImJ_G0006893.1 mouse_genomes_project 6 3198468 3267802 + Gm20619 lincRNA lincRNA MGP_129S1SvImJ_T0004980.1 MGP_129S1SvImJ_G0004273.1 mouse_genomes_project 6 51561718 51568165 - Evx1os antisense antisense MGP_129S1SvImJ_T0004981.1 MGP_129S1SvImJ_G0004273.1 mouse_genomes_project 6 51564165 51566838 - Evx1os antisense antisense MGP_129S1SvImJ_T0101944.1 MGP_129S1SvImJ_G0039834.1 mouse_genomes_project 6 124699290 124843258 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101947.1 MGP_129S1SvImJ_G0039834.1 mouse_genomes_project 6 124824888 124844321 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0005099.1 MGP_129S1SvImJ_G0004353.1 mouse_genomes_project 6 127794584 127815325 + antisense antisense MGP_129S1SvImJ_T0076230.1 MGP_129S1SvImJ_G0030441.1 mouse_genomes_project 6 3797983 3802257 - MGP_129S1SvImJ_P0076230 Dlx5 protein_coding protein_coding MGP_129S1SvImJ_T0076231.1 MGP_129S1SvImJ_G0030441.1 mouse_genomes_project 6 3797983 3802240 - MGP_129S1SvImJ_P0076231 Dlx5 protein_coding protein_coding MGP_129S1SvImJ_T0076232.1 MGP_129S1SvImJ_G0030441.1 mouse_genomes_project 6 3800864 3802254 - Dlx5 protein_coding retained_intron MGP_129S1SvImJ_T0008689.1 MGP_129S1SvImJ_G0007024.1 mouse_genomes_project 6 93199971 93206254 + Gm45218 lincRNA lincRNA MGP_129S1SvImJ_T0000185.1 MGP_129S1SvImJ_G0000141.1 mouse_genomes_project 6 69269084 69269550 - MGP_129S1SvImJ_P0000185 Igkv4-81 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0002702.1 MGP_129S1SvImJ_G0002583.1 mouse_genomes_project 6 39598941 39599455 + MGP_129S1SvImJ_P0002702 Trbv12-2 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002202.1 MGP_129S1SvImJ_G0002114.1 mouse_genomes_project 6 150895851 150897727 + TEC TEC MGP_129S1SvImJ_T0101292.1 MGP_129S1SvImJ_G0039359.1 mouse_genomes_project 6 139478584 139478718 + Gm22881 snoRNA snoRNA MGP_129S1SvImJ_T0076768.1 MGP_129S1SvImJ_G0030542.1 mouse_genomes_project 6 28540711 28546857 + MGP_129S1SvImJ_P0076768 Cpa1 protein_coding protein_coding MGP_129S1SvImJ_T0076769.1 MGP_129S1SvImJ_G0030542.1 mouse_genomes_project 6 28541834 28543368 + Cpa1 protein_coding retained_intron MGP_129S1SvImJ_T0015653.1 MGP_129S1SvImJ_G0013742.1 mouse_genomes_project 6 137134910 137135339 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0078670.1 MGP_129S1SvImJ_G0030998.1 mouse_genomes_project 6 89153694 89179746 - MGP_129S1SvImJ_P0078670 Rab43 protein_coding protein_coding MGP_129S1SvImJ_T0078671.1 MGP_129S1SvImJ_G0030998.1 mouse_genomes_project 6 89153694 89177721 - MGP_129S1SvImJ_P0078671 Rab43 protein_coding protein_coding MGP_129S1SvImJ_T0078673.1 MGP_129S1SvImJ_G0030998.1 mouse_genomes_project 6 89153706 89154917 - Rab43 protein_coding processed_transcript MGP_129S1SvImJ_T0078674.1 MGP_129S1SvImJ_G0030998.1 mouse_genomes_project 6 89156340 89177724 - Rab43 protein_coding processed_transcript MGP_129S1SvImJ_T0078675.1 MGP_129S1SvImJ_G0030998.1 mouse_genomes_project 6 89156993 89180131 - Rab43 protein_coding processed_transcript MGP_129S1SvImJ_T0078677.1 MGP_129S1SvImJ_G0030998.1 mouse_genomes_project 6 89157639 89180065 - Rab43 protein_coding processed_transcript MGP_129S1SvImJ_T0078678.1 MGP_129S1SvImJ_G0030998.1 mouse_genomes_project 6 89158810 89179746 - MGP_129S1SvImJ_P0078678 Rab43 protein_coding protein_coding MGP_129S1SvImJ_T0001962.1 MGP_129S1SvImJ_G0001875.1 mouse_genomes_project 6 26533518 26536770 + TEC TEC MGP_129S1SvImJ_T0078741.1 MGP_129S1SvImJ_G0031011.1 mouse_genomes_project 6 89900993 89918031 - MGP_129S1SvImJ_P0078741 Sec61a1 protein_coding protein_coding MGP_129S1SvImJ_T0078742.1 MGP_129S1SvImJ_G0031011.1 mouse_genomes_project 6 89902215 89903786 - Sec61a1 protein_coding processed_transcript MGP_129S1SvImJ_T0078743.1 MGP_129S1SvImJ_G0031011.1 mouse_genomes_project 6 89903587 89911533 - Sec61a1 protein_coding processed_transcript MGP_129S1SvImJ_T0078744.1 MGP_129S1SvImJ_G0031011.1 mouse_genomes_project 6 89903743 89913027 - Sec61a1 protein_coding retained_intron MGP_129S1SvImJ_T0078745.1 MGP_129S1SvImJ_G0031011.1 mouse_genomes_project 6 89906093 89911851 - Sec61a1 protein_coding retained_intron MGP_129S1SvImJ_T0078746.1 MGP_129S1SvImJ_G0031011.1 mouse_genomes_project 6 89911166 89911923 - Sec61a1 protein_coding retained_intron MGP_129S1SvImJ_T0078747.1 MGP_129S1SvImJ_G0031011.1 mouse_genomes_project 6 89912936 89917899 - Sec61a1 protein_coding retained_intron MGP_129S1SvImJ_T0078748.1 MGP_129S1SvImJ_G0031011.1 mouse_genomes_project 6 89913332 89915106 - Sec61a1 protein_coding retained_intron MGP_129S1SvImJ_T0078749.1 MGP_129S1SvImJ_G0031011.1 mouse_genomes_project 6 89914451 89917954 - Sec61a1 protein_coding retained_intron MGP_129S1SvImJ_T0078750.1 MGP_129S1SvImJ_G0031011.1 mouse_genomes_project 6 89914489 89917917 - Sec61a1 protein_coding processed_transcript MGP_129S1SvImJ_T0078751.1 MGP_129S1SvImJ_G0031011.1 mouse_genomes_project 6 89914509 89918029 - Sec61a1 protein_coding retained_intron MGP_129S1SvImJ_T0078752.1 MGP_129S1SvImJ_G0031011.1 mouse_genomes_project 6 89917303 89917919 - Sec61a1 protein_coding processed_transcript MGP_129S1SvImJ_T0015449.1 MGP_129S1SvImJ_G0013538.1 mouse_genomes_project 6 70638756 70640100 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000201.1 MGP_129S1SvImJ_G0000156.1 mouse_genomes_project 6 70120934 70121523 - MGP_129S1SvImJ_P0000201 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0008802.1 MGP_129S1SvImJ_G0007109.1 mouse_genomes_project 6 154326251 154342787 - 1700003I16Rik lincRNA lincRNA MGP_129S1SvImJ_T0008695.1 MGP_129S1SvImJ_G0007028.1 mouse_genomes_project 6 101859554 101872000 - Gm43067 lincRNA lincRNA MGP_129S1SvImJ_T0101244.1 MGP_129S1SvImJ_G0039311.1 mouse_genomes_project 6 51920840 51920962 - Gm24355 snoRNA snoRNA MGP_129S1SvImJ_T0002215.1 MGP_129S1SvImJ_G0002127.1 mouse_genomes_project 6 154716086 154719339 + TEC TEC MGP_129S1SvImJ_T0080401.1 MGP_129S1SvImJ_G0031336.1 mouse_genomes_project 6 132503342 132537969 - MGP_129S1SvImJ_P0080401 BC035044 protein_coding protein_coding MGP_129S1SvImJ_T0098990.1 MGP_129S1SvImJ_G0037064.1 mouse_genomes_project 6 116343893 116345771 - Gm44167 sense_intronic sense_intronic MGP_129S1SvImJ_T0015570.1 MGP_129S1SvImJ_G0013659.1 mouse_genomes_project 6 117370123 117370511 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076606.1 MGP_129S1SvImJ_G0030519.1 mouse_genomes_project 6 27106925 27114581 + Fam71f1 protein_coding processed_transcript MGP_129S1SvImJ_T0076607.1 MGP_129S1SvImJ_G0030519.1 mouse_genomes_project 6 27106925 27123785 + MGP_129S1SvImJ_P0076607 Fam71f1 protein_coding protein_coding MGP_129S1SvImJ_T0076608.1 MGP_129S1SvImJ_G0030519.1 mouse_genomes_project 6 27106942 27123620 + MGP_129S1SvImJ_P0076608 Fam71f1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076609.1 MGP_129S1SvImJ_G0030519.1 mouse_genomes_project 6 27106942 27123620 + MGP_129S1SvImJ_P0076609 Fam71f1 protein_coding protein_coding MGP_129S1SvImJ_T0076610.1 MGP_129S1SvImJ_G0030519.1 mouse_genomes_project 6 27106984 27123620 + MGP_129S1SvImJ_P0076610 Fam71f1 protein_coding protein_coding MGP_129S1SvImJ_T0079124.1 MGP_129S1SvImJ_G0031087.1 mouse_genomes_project 6 102761775 102862433 + MGP_129S1SvImJ_P0079124 Gxylt2 protein_coding protein_coding MGP_129S1SvImJ_T0079125.1 MGP_129S1SvImJ_G0031087.1 mouse_genomes_project 6 102761796 102764716 + Gxylt2 protein_coding processed_transcript MGP_129S1SvImJ_T0000235.1 MGP_129S1SvImJ_G0000181.1 mouse_genomes_project 6 70991831 71081356 + MGP_129S1SvImJ_P0000235 Igkv3-3 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0077449.1 MGP_129S1SvImJ_G0030717.1 mouse_genomes_project 6 47957692 47961475 + MGP_129S1SvImJ_P0077449 Doxl2 protein_coding protein_coding MGP_129S1SvImJ_T0077450.1 MGP_129S1SvImJ_G0030717.1 mouse_genomes_project 6 47957803 47961476 + MGP_129S1SvImJ_P0077450 Doxl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077451.1 MGP_129S1SvImJ_G0030717.1 mouse_genomes_project 6 47959963 47961473 + Doxl2 protein_coding retained_intron MGP_129S1SvImJ_T0008591.1 MGP_129S1SvImJ_G0006948.1 mouse_genomes_project 6 47309882 47331074 - Gm44696 lincRNA lincRNA MGP_129S1SvImJ_T0101259.1 MGP_129S1SvImJ_G0039326.1 mouse_genomes_project 6 72391056 72391193 - Gm22486 snoRNA snoRNA MGP_129S1SvImJ_T0005101.1 MGP_129S1SvImJ_G0004355.1 mouse_genomes_project 6 128035496 128042666 + Gm20531 antisense antisense MGP_129S1SvImJ_T0080426.1 MGP_129S1SvImJ_G0031343.1 mouse_genomes_project 6 132985459 132995088 - MGP_129S1SvImJ_P0080426 4922502D21Rik protein_coding protein_coding MGP_129S1SvImJ_T0080427.1 MGP_129S1SvImJ_G0031343.1 mouse_genomes_project 6 132986142 132989992 - MGP_129S1SvImJ_P0080427 4922502D21Rik protein_coding protein_coding MGP_129S1SvImJ_T0077328.1 MGP_129S1SvImJ_G0030689.1 mouse_genomes_project 6 46860654 46872563 + MGP_129S1SvImJ_P0077328 Zfp956 protein_coding protein_coding MGP_129S1SvImJ_T0077329.1 MGP_129S1SvImJ_G0030689.1 mouse_genomes_project 6 46860709 46863518 + Zfp956 protein_coding retained_intron MGP_129S1SvImJ_T0077330.1 MGP_129S1SvImJ_G0030689.1 mouse_genomes_project 6 46860711 46872560 + MGP_129S1SvImJ_P0077330 Zfp956 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0000225.1 MGP_129S1SvImJ_G0000173.1 mouse_genomes_project 6 70636601 70637125 - MGP_129S1SvImJ_P0000225 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0015248.1 MGP_129S1SvImJ_G0013337.1 mouse_genomes_project 6 591194 591582 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000176.1 MGP_129S1SvImJ_G0000134.1 mouse_genomes_project 6 68977268 68977736 - MGP_129S1SvImJ_P0000176 Igkv19-93 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000177.1 MGP_129S1SvImJ_G0000134.1 mouse_genomes_project 6 68977268 68977752 - MGP_129S1SvImJ_P0000177 Igkv19-93 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0080241.1 MGP_129S1SvImJ_G0031299.1 mouse_genomes_project 6 128919882 128970246 + MGP_129S1SvImJ_P0080241 Vwf protein_coding protein_coding MGP_129S1SvImJ_T0080242.1 MGP_129S1SvImJ_G0031299.1 mouse_genomes_project 6 128927157 129068589 + MGP_129S1SvImJ_P0080242 Vwf protein_coding protein_coding MGP_129S1SvImJ_T0080243.1 MGP_129S1SvImJ_G0031299.1 mouse_genomes_project 6 128927172 128982803 + Vwf protein_coding retained_intron MGP_129S1SvImJ_T0080244.1 MGP_129S1SvImJ_G0031299.1 mouse_genomes_project 6 128927172 128970543 + MGP_129S1SvImJ_P0080244 Vwf protein_coding protein_coding MGP_129S1SvImJ_T0080245.1 MGP_129S1SvImJ_G0031299.1 mouse_genomes_project 6 128940391 128952768 + Vwf protein_coding processed_transcript MGP_129S1SvImJ_T0080246.1 MGP_129S1SvImJ_G0031299.1 mouse_genomes_project 6 128981576 129022512 + Vwf protein_coding processed_transcript MGP_129S1SvImJ_T0080247.1 MGP_129S1SvImJ_G0031299.1 mouse_genomes_project 6 129025932 129041584 + Vwf protein_coding retained_intron MGP_129S1SvImJ_T0080248.1 MGP_129S1SvImJ_G0031299.1 mouse_genomes_project 6 129028864 129068582 + MGP_129S1SvImJ_P0080248 Vwf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080249.1 MGP_129S1SvImJ_G0031299.1 mouse_genomes_project 6 129034545 129036243 + Vwf protein_coding retained_intron MGP_129S1SvImJ_T0080250.1 MGP_129S1SvImJ_G0031299.1 mouse_genomes_project 6 129067646 129068545 + Vwf protein_coding processed_transcript MGP_129S1SvImJ_T0000174.1 MGP_129S1SvImJ_G0000133.1 mouse_genomes_project 6 68920799 68921269 + MGP_129S1SvImJ_P0000174 Igkv10-95 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000175.1 MGP_129S1SvImJ_G0000133.1 mouse_genomes_project 6 68920982 68921269 + MGP_129S1SvImJ_P0000175 Igkv10-95 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0101272.1 MGP_129S1SvImJ_G0039339.1 mouse_genomes_project 6 102534181 102534315 - Gm23234 snoRNA snoRNA MGP_129S1SvImJ_T0078622.1 MGP_129S1SvImJ_G0030985.1 mouse_genomes_project 6 88345159 88365376 + MGP_129S1SvImJ_P0078622 Nfu1 protein_coding protein_coding MGP_129S1SvImJ_T0078623.1 MGP_129S1SvImJ_G0030985.1 mouse_genomes_project 6 88345759 88352625 + Nfu1 protein_coding retained_intron MGP_129S1SvImJ_T0078624.1 MGP_129S1SvImJ_G0030985.1 mouse_genomes_project 6 88345759 88365369 + MGP_129S1SvImJ_P0078624 Nfu1 protein_coding protein_coding MGP_129S1SvImJ_T0078625.1 MGP_129S1SvImJ_G0030985.1 mouse_genomes_project 6 88345759 88365374 + MGP_129S1SvImJ_P0078625 Nfu1 protein_coding protein_coding MGP_129S1SvImJ_T0078626.1 MGP_129S1SvImJ_G0030985.1 mouse_genomes_project 6 88345803 88348311 + Nfu1 protein_coding retained_intron MGP_129S1SvImJ_T0078627.1 MGP_129S1SvImJ_G0030985.1 mouse_genomes_project 6 88345812 88350357 + Nfu1 protein_coding retained_intron MGP_129S1SvImJ_T0078628.1 MGP_129S1SvImJ_G0030985.1 mouse_genomes_project 6 88345812 88360104 + MGP_129S1SvImJ_P0078628 Nfu1 protein_coding protein_coding MGP_129S1SvImJ_T0078629.1 MGP_129S1SvImJ_G0030985.1 mouse_genomes_project 6 88345926 88362471 + Nfu1 protein_coding processed_transcript MGP_129S1SvImJ_T0078630.1 MGP_129S1SvImJ_G0030985.1 mouse_genomes_project 6 88361931 88365376 + Nfu1 protein_coding retained_intron MGP_129S1SvImJ_T0008660.1 MGP_129S1SvImJ_G0007002.1 mouse_genomes_project 6 85517469 85530058 - Gm10445 lincRNA lincRNA MGP_129S1SvImJ_T0080609.1 MGP_129S1SvImJ_G0031415.1 mouse_genomes_project 6 139467447 139503727 - MGP_129S1SvImJ_P0080609 Hebp1 protein_coding protein_coding MGP_129S1SvImJ_T0080610.1 MGP_129S1SvImJ_G0031415.1 mouse_genomes_project 6 139486470 139503704 - Hebp1 protein_coding processed_transcript MGP_129S1SvImJ_T0080611.1 MGP_129S1SvImJ_G0031415.1 mouse_genomes_project 6 139488873 139541153 - Hebp1 protein_coding processed_transcript MGP_129S1SvImJ_T0080612.1 MGP_129S1SvImJ_G0031415.1 mouse_genomes_project 6 139501082 139503647 - Hebp1 protein_coding retained_intron MGP_129S1SvImJ_T0015531.1 MGP_129S1SvImJ_G0013620.1 mouse_genomes_project 6 102676556 102676978 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077368.1 MGP_129S1SvImJ_G0030696.1 mouse_genomes_project 6 47502623 47520808 + MGP_129S1SvImJ_P0077368 Lrrc61 protein_coding protein_coding MGP_129S1SvImJ_T0077369.1 MGP_129S1SvImJ_G0030696.1 mouse_genomes_project 6 47502626 47518484 + MGP_129S1SvImJ_P0077369 Lrrc61 protein_coding protein_coding MGP_129S1SvImJ_T0077370.1 MGP_129S1SvImJ_G0030696.1 mouse_genomes_project 6 47502626 47518464 + MGP_129S1SvImJ_P0077370 Lrrc61 protein_coding protein_coding MGP_129S1SvImJ_T0077371.1 MGP_129S1SvImJ_G0030696.1 mouse_genomes_project 6 47502632 47520807 + MGP_129S1SvImJ_P0077371 Lrrc61 protein_coding protein_coding MGP_129S1SvImJ_T0077372.1 MGP_129S1SvImJ_G0030696.1 mouse_genomes_project 6 47502638 47518359 + Lrrc61 protein_coding processed_transcript MGP_129S1SvImJ_T0077373.1 MGP_129S1SvImJ_G0030696.1 mouse_genomes_project 6 47502656 47518667 + MGP_129S1SvImJ_P0077373 Lrrc61 protein_coding protein_coding MGP_129S1SvImJ_T0015474.1 MGP_129S1SvImJ_G0013563.1 mouse_genomes_project 6 79863136 79863845 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010822.1 MGP_129S1SvImJ_G0008938.1 mouse_genomes_project 6 122898571 122898656 - Mir706 miRNA miRNA MGP_129S1SvImJ_T0000179.1 MGP_129S1SvImJ_G0000136.1 mouse_genomes_project 6 69014128 69014675 - MGP_129S1SvImJ_P0000179 Igkv4-91 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0076393.1 MGP_129S1SvImJ_G0030472.1 mouse_genomes_project 6 14952506 15095320 + St7 protein_coding retained_intron MGP_129S1SvImJ_T0076394.1 MGP_129S1SvImJ_G0030472.1 mouse_genomes_project 6 14953548 15219804 + MGP_129S1SvImJ_P0076394 St7 protein_coding protein_coding MGP_129S1SvImJ_T0076395.1 MGP_129S1SvImJ_G0030472.1 mouse_genomes_project 6 14953595 15219804 + MGP_129S1SvImJ_P0076395 St7 protein_coding protein_coding MGP_129S1SvImJ_T0076396.1 MGP_129S1SvImJ_G0030472.1 mouse_genomes_project 6 14953633 15219747 + MGP_129S1SvImJ_P0076396 St7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076397.1 MGP_129S1SvImJ_G0030472.1 mouse_genomes_project 6 14953633 15219807 + MGP_129S1SvImJ_P0076397 St7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076398.1 MGP_129S1SvImJ_G0030472.1 mouse_genomes_project 6 14953633 15132029 + MGP_129S1SvImJ_P0076398 St7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076399.1 MGP_129S1SvImJ_G0030472.1 mouse_genomes_project 6 14953633 15219747 + MGP_129S1SvImJ_P0076399 St7 protein_coding protein_coding MGP_129S1SvImJ_T0076400.1 MGP_129S1SvImJ_G0030472.1 mouse_genomes_project 6 14953633 15219747 + MGP_129S1SvImJ_P0076400 St7 protein_coding protein_coding MGP_129S1SvImJ_T0076401.1 MGP_129S1SvImJ_G0030472.1 mouse_genomes_project 6 14953771 15219747 + MGP_129S1SvImJ_P0076401 St7 protein_coding protein_coding MGP_129S1SvImJ_T0076402.1 MGP_129S1SvImJ_G0030472.1 mouse_genomes_project 6 15009069 15219747 + MGP_129S1SvImJ_P0076402 St7 protein_coding protein_coding MGP_129S1SvImJ_T0076403.1 MGP_129S1SvImJ_G0030472.1 mouse_genomes_project 6 15009069 15219747 + MGP_129S1SvImJ_P0076403 St7 protein_coding protein_coding MGP_129S1SvImJ_T0076404.1 MGP_129S1SvImJ_G0030472.1 mouse_genomes_project 6 15014646 15183846 + St7 protein_coding processed_transcript MGP_129S1SvImJ_T0076405.1 MGP_129S1SvImJ_G0030472.1 mouse_genomes_project 6 15014646 15219807 + MGP_129S1SvImJ_P0076405 St7 protein_coding protein_coding MGP_129S1SvImJ_T0076406.1 MGP_129S1SvImJ_G0030472.1 mouse_genomes_project 6 15014692 15219802 + MGP_129S1SvImJ_P0076406 St7 protein_coding protein_coding MGP_129S1SvImJ_T0076407.1 MGP_129S1SvImJ_G0030472.1 mouse_genomes_project 6 15014772 15111211 + St7 protein_coding retained_intron MGP_129S1SvImJ_T0076408.1 MGP_129S1SvImJ_G0030472.1 mouse_genomes_project 6 15014809 15219804 + St7 protein_coding retained_intron MGP_129S1SvImJ_T0076409.1 MGP_129S1SvImJ_G0030472.1 mouse_genomes_project 6 15014872 15219783 + St7 protein_coding retained_intron MGP_129S1SvImJ_T0076410.1 MGP_129S1SvImJ_G0030472.1 mouse_genomes_project 6 15115024 15123013 + St7 protein_coding processed_transcript MGP_129S1SvImJ_T0076411.1 MGP_129S1SvImJ_G0030472.1 mouse_genomes_project 6 15115043 15182271 + St7 protein_coding processed_transcript MGP_129S1SvImJ_T0076412.1 MGP_129S1SvImJ_G0030472.1 mouse_genomes_project 6 15131984 15183832 + St7 protein_coding processed_transcript MGP_129S1SvImJ_T0076413.1 MGP_129S1SvImJ_G0030472.1 mouse_genomes_project 6 15182924 15219716 + St7 protein_coding processed_transcript MGP_129S1SvImJ_T0015618.1 MGP_129S1SvImJ_G0013707.1 mouse_genomes_project 6 130671040 130671350 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002023.1 MGP_129S1SvImJ_G0001936.1 mouse_genomes_project 6 71556725 71557631 - TEC TEC MGP_129S1SvImJ_T0005082.1 MGP_129S1SvImJ_G0004336.1 mouse_genomes_project 6 115780168 115781262 - Gm16161 antisense antisense MGP_129S1SvImJ_T0079267.1 MGP_129S1SvImJ_G0031115.1 mouse_genomes_project 6 115786638 115809934 + Cpne9 protein_coding retained_intron MGP_129S1SvImJ_T0079268.1 MGP_129S1SvImJ_G0031115.1 mouse_genomes_project 6 115786638 115809876 + MGP_129S1SvImJ_P0079268 Cpne9 protein_coding protein_coding MGP_129S1SvImJ_T0079269.1 MGP_129S1SvImJ_G0031115.1 mouse_genomes_project 6 115786641 115809131 + MGP_129S1SvImJ_P0079269 Cpne9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079270.1 MGP_129S1SvImJ_G0031115.1 mouse_genomes_project 6 115786666 115787761 + Cpne9 protein_coding retained_intron MGP_129S1SvImJ_T0079271.1 MGP_129S1SvImJ_G0031115.1 mouse_genomes_project 6 115786667 115789600 + Cpne9 protein_coding retained_intron MGP_129S1SvImJ_T0079272.1 MGP_129S1SvImJ_G0031115.1 mouse_genomes_project 6 115786670 115787838 + Cpne9 protein_coding retained_intron MGP_129S1SvImJ_T0079273.1 MGP_129S1SvImJ_G0031115.1 mouse_genomes_project 6 115786695 115788301 + Cpne9 protein_coding processed_transcript MGP_129S1SvImJ_T0079274.1 MGP_129S1SvImJ_G0031115.1 mouse_genomes_project 6 115786696 115788756 + Cpne9 protein_coding processed_transcript MGP_129S1SvImJ_T0079275.1 MGP_129S1SvImJ_G0031115.1 mouse_genomes_project 6 115786805 115808928 + MGP_129S1SvImJ_P0079275 Cpne9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0079276.1 MGP_129S1SvImJ_G0031115.1 mouse_genomes_project 6 115792817 115809878 + Cpne9 protein_coding retained_intron MGP_129S1SvImJ_T0079277.1 MGP_129S1SvImJ_G0031115.1 mouse_genomes_project 6 115798635 115805986 + Cpne9 protein_coding processed_transcript MGP_129S1SvImJ_T0010796.1 MGP_129S1SvImJ_G0008912.1 mouse_genomes_project 6 82865546 82865624 - Mir468 miRNA miRNA MGP_129S1SvImJ_T0080151.1 MGP_129S1SvImJ_G0031282.1 mouse_genomes_project 6 128364014 128374483 + MGP_129S1SvImJ_P0080151 Ing4 protein_coding protein_coding MGP_129S1SvImJ_T0080152.1 MGP_129S1SvImJ_G0031282.1 mouse_genomes_project 6 128364090 128371666 + Ing4 protein_coding retained_intron MGP_129S1SvImJ_T0080153.1 MGP_129S1SvImJ_G0031282.1 mouse_genomes_project 6 128364090 128374745 + MGP_129S1SvImJ_P0080153 Ing4 protein_coding protein_coding MGP_129S1SvImJ_T0080154.1 MGP_129S1SvImJ_G0031282.1 mouse_genomes_project 6 128364102 128373053 + Ing4 protein_coding retained_intron MGP_129S1SvImJ_T0080155.1 MGP_129S1SvImJ_G0031282.1 mouse_genomes_project 6 128364115 128374289 + Ing4 protein_coding retained_intron MGP_129S1SvImJ_T0080156.1 MGP_129S1SvImJ_G0031282.1 mouse_genomes_project 6 128364115 128374746 + MGP_129S1SvImJ_P0080156 Ing4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080157.1 MGP_129S1SvImJ_G0031282.1 mouse_genomes_project 6 128369505 128373487 + Ing4 protein_coding retained_intron MGP_129S1SvImJ_T0080158.1 MGP_129S1SvImJ_G0031282.1 mouse_genomes_project 6 128371002 128374746 + Ing4 protein_coding retained_intron MGP_129S1SvImJ_T0080159.1 MGP_129S1SvImJ_G0031282.1 mouse_genomes_project 6 128373120 128374099 + Ing4 protein_coding retained_intron MGP_129S1SvImJ_T0002191.1 MGP_129S1SvImJ_G0002103.1 mouse_genomes_project 6 144253728 144255010 - TEC TEC MGP_129S1SvImJ_T0000182.1 MGP_129S1SvImJ_G0000138.1 mouse_genomes_project 6 69116265 69117032 - MGP_129S1SvImJ_P0000182 Igkv1-88 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0080623.1 MGP_129S1SvImJ_G0031419.1 mouse_genomes_project 6 139711675 139732398 + MGP_129S1SvImJ_P0080623 Emp1 protein_coding protein_coding MGP_129S1SvImJ_T0080624.1 MGP_129S1SvImJ_G0031419.1 mouse_genomes_project 6 139712076 139732398 + MGP_129S1SvImJ_P0080624 Emp1 protein_coding protein_coding MGP_129S1SvImJ_T0080625.1 MGP_129S1SvImJ_G0031419.1 mouse_genomes_project 6 139712076 139732398 + MGP_129S1SvImJ_P0080625 Emp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080626.1 MGP_129S1SvImJ_G0031419.1 mouse_genomes_project 6 139712153 139729601 + Emp1 protein_coding retained_intron MGP_129S1SvImJ_T0080627.1 MGP_129S1SvImJ_G0031419.1 mouse_genomes_project 6 139712213 139714836 + Emp1 protein_coding retained_intron MGP_129S1SvImJ_T0080628.1 MGP_129S1SvImJ_G0031419.1 mouse_genomes_project 6 139716669 139732398 + MGP_129S1SvImJ_P0080628 Emp1 protein_coding protein_coding MGP_129S1SvImJ_T0077723.1 MGP_129S1SvImJ_G0030780.1 mouse_genomes_project 6 56175637 56177053 + Avl9 protein_coding retained_intron MGP_129S1SvImJ_T0077724.1 MGP_129S1SvImJ_G0030780.1 mouse_genomes_project 6 56175665 56219063 + MGP_129S1SvImJ_P0077724 Avl9 protein_coding protein_coding MGP_129S1SvImJ_T0077725.1 MGP_129S1SvImJ_G0030780.1 mouse_genomes_project 6 56175676 56197668 + MGP_129S1SvImJ_P0077725 Avl9 protein_coding protein_coding MGP_129S1SvImJ_T0077726.1 MGP_129S1SvImJ_G0030780.1 mouse_genomes_project 6 56175680 56188745 + MGP_129S1SvImJ_P0077726 Avl9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0077727.1 MGP_129S1SvImJ_G0030780.1 mouse_genomes_project 6 56201420 56211175 + Avl9 protein_coding retained_intron MGP_129S1SvImJ_T0005065.1 MGP_129S1SvImJ_G0004327.1 mouse_genomes_project 6 101693430 101701512 + Gm26748 antisense antisense MGP_129S1SvImJ_T0101283.1 MGP_129S1SvImJ_G0039350.1 mouse_genomes_project 6 127202346 127202453 + Gm22763 snoRNA snoRNA MGP_129S1SvImJ_T0004966.1 MGP_129S1SvImJ_G0004265.1 mouse_genomes_project 6 42106184 42113234 + 9430018G01Rik antisense antisense MGP_129S1SvImJ_T0002067.1 MGP_129S1SvImJ_G0001980.1 mouse_genomes_project 6 86925954 86931134 + TEC TEC MGP_129S1SvImJ_T0015269.1 MGP_129S1SvImJ_G0013358.1 mouse_genomes_project 6 7322858 7323483 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008720.1 MGP_129S1SvImJ_G0007050.1 mouse_genomes_project 6 120262143 120270640 + Gm9946 lincRNA lincRNA MGP_129S1SvImJ_T0008721.1 MGP_129S1SvImJ_G0007050.1 mouse_genomes_project 6 120262143 120274772 + Gm9946 lincRNA lincRNA MGP_129S1SvImJ_T0008722.1 MGP_129S1SvImJ_G0007050.1 mouse_genomes_project 6 120270118 120270502 + Gm9946 lincRNA lincRNA MGP_129S1SvImJ_T0077249.1 MGP_129S1SvImJ_G0030663.1 mouse_genomes_project 6 41359749 41360682 + MGP_129S1SvImJ_P0077249 Olfr450 protein_coding protein_coding MGP_129S1SvImJ_T0015353.1 MGP_129S1SvImJ_G0013442.1 mouse_genomes_project 6 47787085 47789082 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015376.1 MGP_129S1SvImJ_G0013465.1 mouse_genomes_project 6 52484256 52485442 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001940.1 MGP_129S1SvImJ_G0001853.1 mouse_genomes_project 6 3784432 3785786 - TEC TEC MGP_129S1SvImJ_T0008621.1 MGP_129S1SvImJ_G0006970.1 mouse_genomes_project 6 54804004 54819267 + 6430584L05Rik lincRNA lincRNA MGP_129S1SvImJ_T0011653.1 MGP_129S1SvImJ_G0009769.1 mouse_genomes_project 6 27992268 27992595 - Gm25580 misc_RNA misc_RNA MGP_129S1SvImJ_T0002207.1 MGP_129S1SvImJ_G0002119.1 mouse_genomes_project 6 152597068 152601890 - TEC TEC MGP_129S1SvImJ_T0015603.1 MGP_129S1SvImJ_G0013692.1 mouse_genomes_project 6 127134173 127135023 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076484.1 MGP_129S1SvImJ_G0030488.1 mouse_genomes_project 6 20799748 21401224 - MGP_129S1SvImJ_P0076484 Cadps2 protein_coding protein_coding MGP_129S1SvImJ_T0076485.1 MGP_129S1SvImJ_G0030488.1 mouse_genomes_project 6 20799749 21401451 - MGP_129S1SvImJ_P0076485 Cadps2 protein_coding protein_coding MGP_129S1SvImJ_T0076486.1 MGP_129S1SvImJ_G0030488.1 mouse_genomes_project 6 20799749 21401452 - MGP_129S1SvImJ_P0076486 Cadps2 protein_coding protein_coding MGP_129S1SvImJ_T0076487.1 MGP_129S1SvImJ_G0030488.1 mouse_genomes_project 6 20799799 21401256 - MGP_129S1SvImJ_P0076487 Cadps2 protein_coding protein_coding MGP_129S1SvImJ_T0076488.1 MGP_129S1SvImJ_G0030488.1 mouse_genomes_project 6 20799814 21401168 - MGP_129S1SvImJ_P0076488 Cadps2 protein_coding protein_coding MGP_129S1SvImJ_T0076489.1 MGP_129S1SvImJ_G0030488.1 mouse_genomes_project 6 20799815 21401255 - MGP_129S1SvImJ_P0076489 Cadps2 protein_coding protein_coding MGP_129S1SvImJ_T0076490.1 MGP_129S1SvImJ_G0030488.1 mouse_genomes_project 6 20799819 20902619 - Cadps2 protein_coding processed_transcript MGP_129S1SvImJ_T0076491.1 MGP_129S1SvImJ_G0030488.1 mouse_genomes_project 6 20800484 21134131 - MGP_129S1SvImJ_P0076491 Cadps2 protein_coding protein_coding MGP_129S1SvImJ_T0076492.1 MGP_129S1SvImJ_G0030488.1 mouse_genomes_project 6 20800484 21401174 - MGP_129S1SvImJ_P0076492 Cadps2 protein_coding protein_coding MGP_129S1SvImJ_T0076493.1 MGP_129S1SvImJ_G0030488.1 mouse_genomes_project 6 20800489 20856564 - Cadps2 protein_coding processed_transcript MGP_129S1SvImJ_T0076494.1 MGP_129S1SvImJ_G0030488.1 mouse_genomes_project 6 20955818 21401294 - MGP_129S1SvImJ_P0076494 Cadps2 protein_coding protein_coding MGP_129S1SvImJ_T0076495.1 MGP_129S1SvImJ_G0030488.1 mouse_genomes_project 6 21127575 21401331 - Cadps2 protein_coding retained_intron MGP_129S1SvImJ_T0076499.1 MGP_129S1SvImJ_G0030488.1 mouse_genomes_project 6 21233356 21401293 - Cadps2 protein_coding retained_intron MGP_129S1SvImJ_T0015475.1 MGP_129S1SvImJ_G0013564.1 mouse_genomes_project 6 80371389 80372149 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077209.1 MGP_129S1SvImJ_G0030648.1 mouse_genomes_project 6 40866214 40867733 + MGP_129S1SvImJ_P0077209 Zyx protein_coding protein_coding MGP_129S1SvImJ_T0077210.1 MGP_129S1SvImJ_G0030648.1 mouse_genomes_project 6 40866364 40868192 + MGP_129S1SvImJ_P0077210 Zyx protein_coding protein_coding MGP_129S1SvImJ_T0077211.1 MGP_129S1SvImJ_G0030648.1 mouse_genomes_project 6 40866412 40875147 + MGP_129S1SvImJ_P0077211 Zyx protein_coding protein_coding MGP_129S1SvImJ_T0077212.1 MGP_129S1SvImJ_G0030648.1 mouse_genomes_project 6 40866453 40874977 + MGP_129S1SvImJ_P0077212 Zyx protein_coding protein_coding MGP_129S1SvImJ_T0077213.1 MGP_129S1SvImJ_G0030648.1 mouse_genomes_project 6 40866617 40874977 + Zyx protein_coding retained_intron MGP_129S1SvImJ_T0077214.1 MGP_129S1SvImJ_G0030648.1 mouse_genomes_project 6 40866617 40874977 + MGP_129S1SvImJ_P0077214 Zyx protein_coding protein_coding MGP_129S1SvImJ_T0077215.1 MGP_129S1SvImJ_G0030648.1 mouse_genomes_project 6 40866622 40868349 + Zyx protein_coding processed_transcript MGP_129S1SvImJ_T0077216.1 MGP_129S1SvImJ_G0030648.1 mouse_genomes_project 6 40866623 40876798 + MGP_129S1SvImJ_P0077216 Zyx protein_coding protein_coding MGP_129S1SvImJ_T0077217.1 MGP_129S1SvImJ_G0030648.1 mouse_genomes_project 6 40866655 40867649 + MGP_129S1SvImJ_P0077217 Zyx protein_coding protein_coding MGP_129S1SvImJ_T0077218.1 MGP_129S1SvImJ_G0030648.1 mouse_genomes_project 6 40870062 40872622 + Zyx protein_coding processed_transcript MGP_129S1SvImJ_T0077219.1 MGP_129S1SvImJ_G0030648.1 mouse_genomes_project 6 40871721 40872846 + Zyx protein_coding processed_transcript MGP_129S1SvImJ_T0101952.1 MGP_129S1SvImJ_G0039837.1 mouse_genomes_project 6 132669888 132675873 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101953.1 MGP_129S1SvImJ_G0039837.1 mouse_genomes_project 6 132673942 132675865 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0080454.1 MGP_129S1SvImJ_G0031351.1 mouse_genomes_project 6 133203168 133212043 + MGP_129S1SvImJ_P0080454 Gabarapl1 protein_coding protein_coding MGP_129S1SvImJ_T0101737.1 MGP_129S1SvImJ_G0039734.1 mouse_genomes_project 6 9108606 9126773 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101738.1 MGP_129S1SvImJ_G0039734.1 mouse_genomes_project 6 9108798 9109358 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0015544.1 MGP_129S1SvImJ_G0013633.1 mouse_genomes_project 6 109329697 109330152 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076479.1 MGP_129S1SvImJ_G0030486.1 mouse_genomes_project 6 20579094 20648441 - MGP_129S1SvImJ_P0076479 Aass protein_coding protein_coding MGP_129S1SvImJ_T0076480.1 MGP_129S1SvImJ_G0030486.1 mouse_genomes_project 6 20603521 20640460 - Aass protein_coding processed_transcript MGP_129S1SvImJ_T0076481.1 MGP_129S1SvImJ_G0030486.1 mouse_genomes_project 6 20603521 20640492 - MGP_129S1SvImJ_P0076481 Aass protein_coding protein_coding MGP_129S1SvImJ_T0076482.1 MGP_129S1SvImJ_G0030486.1 mouse_genomes_project 6 20620775 20648371 - Aass protein_coding processed_transcript MGP_129S1SvImJ_T0078315.1 MGP_129S1SvImJ_G0030928.1 mouse_genomes_project 6 84310463 84322276 - MGP_129S1SvImJ_P0078315 Mthfd2 protein_coding protein_coding MGP_129S1SvImJ_T0078316.1 MGP_129S1SvImJ_G0030928.1 mouse_genomes_project 6 84311174 84322223 - MGP_129S1SvImJ_P0078316 Mthfd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078317.1 MGP_129S1SvImJ_G0030928.1 mouse_genomes_project 6 84311330 84313985 - Mthfd2 protein_coding retained_intron MGP_129S1SvImJ_T0078318.1 MGP_129S1SvImJ_G0030928.1 mouse_genomes_project 6 84314011 84315226 - Mthfd2 protein_coding retained_intron MGP_129S1SvImJ_T0078319.1 MGP_129S1SvImJ_G0030928.1 mouse_genomes_project 6 84314229 84316271 - Mthfd2 protein_coding retained_intron MGP_129S1SvImJ_T0078320.1 MGP_129S1SvImJ_G0030928.1 mouse_genomes_project 6 84316022 84317081 - Mthfd2 protein_coding retained_intron MGP_129S1SvImJ_T0078321.1 MGP_129S1SvImJ_G0030928.1 mouse_genomes_project 6 84316546 84331184 - MGP_129S1SvImJ_P0078321 Mthfd2 protein_coding protein_coding MGP_129S1SvImJ_T0077180.1 MGP_129S1SvImJ_G0030641.1 mouse_genomes_project 6 40653695 40654655 + MGP_129S1SvImJ_P0077180 Tas2r139 protein_coding protein_coding MGP_129S1SvImJ_T0015447.1 MGP_129S1SvImJ_G0013536.1 mouse_genomes_project 6 70492621 70493511 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077728.1 MGP_129S1SvImJ_G0030781.1 mouse_genomes_project 6 56235776 56256002 - MGP_129S1SvImJ_P0077728 Kbtbd2 protein_coding protein_coding MGP_129S1SvImJ_T0077729.1 MGP_129S1SvImJ_G0030781.1 mouse_genomes_project 6 56235777 56256079 - MGP_129S1SvImJ_P0077729 Kbtbd2 protein_coding protein_coding MGP_129S1SvImJ_T0077730.1 MGP_129S1SvImJ_G0030781.1 mouse_genomes_project 6 56247670 56255545 - MGP_129S1SvImJ_P0077730 Kbtbd2 protein_coding protein_coding MGP_129S1SvImJ_T0077731.1 MGP_129S1SvImJ_G0030781.1 mouse_genomes_project 6 56247815 56255040 - Kbtbd2 protein_coding processed_transcript MGP_129S1SvImJ_T0002169.1 MGP_129S1SvImJ_G0002081.1 mouse_genomes_project 6 131345891 131348659 - TEC TEC MGP_129S1SvImJ_T0015283.1 MGP_129S1SvImJ_G0013372.1 mouse_genomes_project 6 13430762 13431374 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002081.1 MGP_129S1SvImJ_G0001994.1 mouse_genomes_project 6 88681555 88683664 - TEC TEC MGP_129S1SvImJ_T0002104.1 MGP_129S1SvImJ_G0002017.1 mouse_genomes_project 6 93282639 93283665 - TEC TEC MGP_129S1SvImJ_T0005655.1 MGP_129S1SvImJ_G0004763.1 mouse_genomes_project 6 140943094 140947144 - Gm44140 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0101962.1 MGP_129S1SvImJ_G0039844.1 mouse_genomes_project 6 138004984 138008389 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101963.1 MGP_129S1SvImJ_G0039844.1 mouse_genomes_project 6 138004984 138008388 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101964.1 MGP_129S1SvImJ_G0039844.1 mouse_genomes_project 6 138006281 138008388 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0076247.1 MGP_129S1SvImJ_G0030446.1 mouse_genomes_project 6 4880665 5067180 - MGP_129S1SvImJ_P0076247 Col28a1 protein_coding protein_coding MGP_129S1SvImJ_T0076248.1 MGP_129S1SvImJ_G0030446.1 mouse_genomes_project 6 4904234 4905732 - Col28a1 protein_coding processed_transcript MGP_129S1SvImJ_T0076249.1 MGP_129S1SvImJ_G0030446.1 mouse_genomes_project 6 4960612 4965515 - Col28a1 protein_coding retained_intron MGP_129S1SvImJ_T0100014.1 MGP_129S1SvImJ_G0038081.1 mouse_genomes_project 6 99416081 99416244 - Gm23510 snRNA snRNA MGP_129S1SvImJ_T0015391.1 MGP_129S1SvImJ_G0013480.1 mouse_genomes_project 6 61161539 61161963 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002159.1 MGP_129S1SvImJ_G0002071.1 mouse_genomes_project 6 125927906 125930274 + TEC TEC MGP_129S1SvImJ_T0002117.1 MGP_129S1SvImJ_G0002030.1 mouse_genomes_project 6 99423463 99425129 - TEC TEC MGP_129S1SvImJ_T0076985.1 MGP_129S1SvImJ_G0030582.1 mouse_genomes_project 6 36398372 36545737 - MGP_129S1SvImJ_P0076985 D630045J12Rik protein_coding protein_coding MGP_129S1SvImJ_T0076986.1 MGP_129S1SvImJ_G0030582.1 mouse_genomes_project 6 36401214 36423845 - D630045J12Rik protein_coding retained_intron MGP_129S1SvImJ_T0076987.1 MGP_129S1SvImJ_G0030582.1 mouse_genomes_project 6 36401220 36423788 - D630045J12Rik protein_coding retained_intron MGP_129S1SvImJ_T0076988.1 MGP_129S1SvImJ_G0030582.1 mouse_genomes_project 6 36412642 36474063 - D630045J12Rik protein_coding retained_intron MGP_129S1SvImJ_T0076989.1 MGP_129S1SvImJ_G0030582.1 mouse_genomes_project 6 36435894 36446387 - D630045J12Rik protein_coding retained_intron MGP_129S1SvImJ_T0081018.1 MGP_129S1SvImJ_G0031490.1 mouse_genomes_project 6 151746158 151802885 + MGP_129S1SvImJ_P0081018 Stk38l protein_coding protein_coding MGP_129S1SvImJ_T0081019.1 MGP_129S1SvImJ_G0031490.1 mouse_genomes_project 6 151746481 151781671 + MGP_129S1SvImJ_P0081019 Stk38l protein_coding protein_coding MGP_129S1SvImJ_T0015657.1 MGP_129S1SvImJ_G0013746.1 mouse_genomes_project 6 139127923 139128332 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011682.1 MGP_129S1SvImJ_G0009798.1 mouse_genomes_project 6 101868380 101868702 - Gm24248 misc_RNA misc_RNA MGP_129S1SvImJ_T0008532.1 MGP_129S1SvImJ_G0006911.1 mouse_genomes_project 6 19321695 19326879 - Gm3289 lincRNA lincRNA MGP_129S1SvImJ_T0015381.1 MGP_129S1SvImJ_G0013470.1 mouse_genomes_project 6 57686129 57686388 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000197.1 MGP_129S1SvImJ_G0000152.1 mouse_genomes_project 6 70051006 70051572 - MGP_129S1SvImJ_P0000197 Igkv5-48 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0011649.1 MGP_129S1SvImJ_G0009765.1 mouse_genomes_project 6 15183048 15183185 + Gm27444 misc_RNA misc_RNA MGP_129S1SvImJ_T0000311.1 MGP_129S1SvImJ_G0000253.1 mouse_genomes_project 6 68513006 68513661 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0015253.1 MGP_129S1SvImJ_G0013342.1 mouse_genomes_project 6 1325478 1328463 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011652.1 MGP_129S1SvImJ_G0009768.1 mouse_genomes_project 6 16681670 16681928 - Gm24213 misc_RNA misc_RNA MGP_129S1SvImJ_T0076442.1 MGP_129S1SvImJ_G0030480.1 mouse_genomes_project 6 19237671 19321230 - MGP_129S1SvImJ_P0076442 Tspan12 protein_coding protein_coding MGP_129S1SvImJ_T0076443.1 MGP_129S1SvImJ_G0030480.1 mouse_genomes_project 6 19237671 19320799 - MGP_129S1SvImJ_P0076443 Tspan12 protein_coding protein_coding MGP_129S1SvImJ_T0076444.1 MGP_129S1SvImJ_G0030480.1 mouse_genomes_project 6 19261968 19320692 - MGP_129S1SvImJ_P0076444 Tspan12 protein_coding protein_coding MGP_129S1SvImJ_T0076445.1 MGP_129S1SvImJ_G0030480.1 mouse_genomes_project 6 19268684 19320625 - MGP_129S1SvImJ_P0076445 Tspan12 protein_coding protein_coding MGP_129S1SvImJ_T0076446.1 MGP_129S1SvImJ_G0030480.1 mouse_genomes_project 6 19306742 19320880 - MGP_129S1SvImJ_P0076446 Tspan12 protein_coding protein_coding MGP_129S1SvImJ_T0076447.1 MGP_129S1SvImJ_G0030480.1 mouse_genomes_project 6 19319715 19320539 - MGP_129S1SvImJ_P0076447 Tspan12 protein_coding protein_coding MGP_129S1SvImJ_T0076207.1 MGP_129S1SvImJ_G0030435.1 mouse_genomes_project 6 2220606 2274611 + MGP_129S1SvImJ_P0076207 Asb4 protein_coding protein_coding MGP_129S1SvImJ_T0076208.1 MGP_129S1SvImJ_G0030435.1 mouse_genomes_project 6 2227491 2239298 + MGP_129S1SvImJ_P0076208 Asb4 protein_coding protein_coding MGP_129S1SvImJ_T0001978.1 MGP_129S1SvImJ_G0001891.1 mouse_genomes_project 6 39364906 39366249 - TEC TEC MGP_129S1SvImJ_T0078976.1 MGP_129S1SvImJ_G0031057.1 mouse_genomes_project 6 93819229 93849822 - MGP_129S1SvImJ_P0078976 Rbsn protein_coding protein_coding MGP_129S1SvImJ_T0078977.1 MGP_129S1SvImJ_G0031057.1 mouse_genomes_project 6 93822358 93833126 - MGP_129S1SvImJ_P0078977 Rbsn protein_coding protein_coding MGP_129S1SvImJ_T0078978.1 MGP_129S1SvImJ_G0031057.1 mouse_genomes_project 6 93822900 93835029 - Rbsn protein_coding processed_transcript MGP_129S1SvImJ_T0078979.1 MGP_129S1SvImJ_G0031057.1 mouse_genomes_project 6 93823263 93826646 - Rbsn protein_coding retained_intron MGP_129S1SvImJ_T0078980.1 MGP_129S1SvImJ_G0031057.1 mouse_genomes_project 6 93841101 93849746 - MGP_129S1SvImJ_P0078980 Rbsn protein_coding protein_coding MGP_129S1SvImJ_T0078981.1 MGP_129S1SvImJ_G0031057.1 mouse_genomes_project 6 93846664 93849466 - MGP_129S1SvImJ_P0078981 Rbsn protein_coding protein_coding MGP_129S1SvImJ_T0077846.1 MGP_129S1SvImJ_G0030827.1 mouse_genomes_project 6 63092342 63156039 + Grid2 protein_coding processed_transcript MGP_129S1SvImJ_T0077847.1 MGP_129S1SvImJ_G0030827.1 mouse_genomes_project 6 63092472 64079961 + Grid2 protein_coding processed_transcript MGP_129S1SvImJ_T0077848.1 MGP_129S1SvImJ_G0030827.1 mouse_genomes_project 6 63092493 64590517 + MGP_129S1SvImJ_P0077848 Grid2 protein_coding protein_coding MGP_129S1SvImJ_T0077849.1 MGP_129S1SvImJ_G0030827.1 mouse_genomes_project 6 63092661 63378038 + Grid2 protein_coding retained_intron MGP_129S1SvImJ_T0077850.1 MGP_129S1SvImJ_G0030827.1 mouse_genomes_project 6 63093292 64185109 + Grid2 protein_coding retained_intron MGP_129S1SvImJ_T0077851.1 MGP_129S1SvImJ_G0030827.1 mouse_genomes_project 6 63974449 63992339 + Grid2 protein_coding retained_intron MGP_129S1SvImJ_T0078823.1 MGP_129S1SvImJ_G0031019.1 mouse_genomes_project 6 90767258 90808790 - MGP_129S1SvImJ_P0078823 Plxna1 protein_coding protein_coding MGP_129S1SvImJ_T0078824.1 MGP_129S1SvImJ_G0031019.1 mouse_genomes_project 6 90771747 90772213 - Plxna1 protein_coding retained_intron MGP_129S1SvImJ_T0078825.1 MGP_129S1SvImJ_G0031019.1 mouse_genomes_project 6 90773638 90775757 - MGP_129S1SvImJ_P0078825 Plxna1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078826.1 MGP_129S1SvImJ_G0031019.1 mouse_genomes_project 6 90781501 90784195 - Plxna1 protein_coding processed_transcript MGP_129S1SvImJ_T0078827.1 MGP_129S1SvImJ_G0031019.1 mouse_genomes_project 6 90786535 90793714 - MGP_129S1SvImJ_P0078827 Plxna1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0004963.1 MGP_129S1SvImJ_G0004263.1 mouse_genomes_project 6 40888264 40898147 + 2010310C07Rik antisense antisense MGP_129S1SvImJ_T0004964.1 MGP_129S1SvImJ_G0004263.1 mouse_genomes_project 6 40895547 40898807 + 2010310C07Rik antisense antisense MGP_129S1SvImJ_T0079032.1 MGP_129S1SvImJ_G0031070.1 mouse_genomes_project 6 97980190 97981925 - MGP_129S1SvImJ_P0079032 1700123L14Rik protein_coding protein_coding MGP_129S1SvImJ_T0001961.1 MGP_129S1SvImJ_G0001874.1 mouse_genomes_project 6 26301544 26304442 + TEC TEC MGP_129S1SvImJ_T0015373.1 MGP_129S1SvImJ_G0013462.1 mouse_genomes_project 6 52009414 52009715 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079922.1 MGP_129S1SvImJ_G0031230.1 mouse_genomes_project 6 125704861 125709540 - MGP_129S1SvImJ_P0079922 Gdf3 protein_coding protein_coding MGP_129S1SvImJ_T0079923.1 MGP_129S1SvImJ_G0031230.1 mouse_genomes_project 6 125707479 125709277 - Gdf3 protein_coding processed_transcript MGP_129S1SvImJ_T0002045.1 MGP_129S1SvImJ_G0001958.1 mouse_genomes_project 6 78268631 78271686 - TEC TEC MGP_129S1SvImJ_T0000301.1 MGP_129S1SvImJ_G0000243.1 mouse_genomes_project 6 67983742 67984209 + IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0008688.1 MGP_129S1SvImJ_G0007023.1 mouse_genomes_project 6 93036524 93037293 + 1810044D09Rik lincRNA lincRNA MGP_129S1SvImJ_T0002059.1 MGP_129S1SvImJ_G0001972.1 mouse_genomes_project 6 82862764 82864285 - TEC TEC MGP_129S1SvImJ_T0078591.1 MGP_129S1SvImJ_G0030980.1 mouse_genomes_project 6 87953654 87975400 - MGP_129S1SvImJ_P0078591 Mxd1 protein_coding protein_coding MGP_129S1SvImJ_T0078592.1 MGP_129S1SvImJ_G0030980.1 mouse_genomes_project 6 87955628 87969359 - MGP_129S1SvImJ_P0078592 Mxd1 protein_coding protein_coding MGP_129S1SvImJ_T0078593.1 MGP_129S1SvImJ_G0030980.1 mouse_genomes_project 6 87957412 87975339 - MGP_129S1SvImJ_P0078593 Mxd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078594.1 MGP_129S1SvImJ_G0030980.1 mouse_genomes_project 6 87972439 87975356 - Mxd1 protein_coding retained_intron MGP_129S1SvImJ_T0004930.1 MGP_129S1SvImJ_G0004234.1 mouse_genomes_project 6 14445606 14643413 - Gm15581 antisense antisense MGP_129S1SvImJ_T0077331.1 MGP_129S1SvImJ_G0030690.1 mouse_genomes_project 6 46933641 46958749 - MGP_129S1SvImJ_P0077331 Zfp777 protein_coding protein_coding MGP_129S1SvImJ_T0077332.1 MGP_129S1SvImJ_G0030690.1 mouse_genomes_project 6 46933658 46959380 - MGP_129S1SvImJ_P0077332 Zfp777 protein_coding protein_coding MGP_129S1SvImJ_T0077333.1 MGP_129S1SvImJ_G0030690.1 mouse_genomes_project 6 46938832 46953679 - MGP_129S1SvImJ_P0077333 Zfp777 protein_coding protein_coding MGP_129S1SvImJ_T0077334.1 MGP_129S1SvImJ_G0030690.1 mouse_genomes_project 6 46953598 46958749 - MGP_129S1SvImJ_P0077334 Zfp777 protein_coding protein_coding MGP_129S1SvImJ_T0077335.1 MGP_129S1SvImJ_G0030690.1 mouse_genomes_project 6 46953880 46957230 - MGP_129S1SvImJ_P0077335 Zfp777 protein_coding protein_coding MGP_129S1SvImJ_T0080237.1 MGP_129S1SvImJ_G0031297.1 mouse_genomes_project 6 128711828 128730751 - MGP_129S1SvImJ_P0080237 Plekhg6 protein_coding protein_coding MGP_129S1SvImJ_T0079120.1 MGP_129S1SvImJ_G0031086.1 mouse_genomes_project 6 102615767 102722841 - MGP_129S1SvImJ_P0079120 Shq1 protein_coding protein_coding MGP_129S1SvImJ_T0079121.1 MGP_129S1SvImJ_G0031086.1 mouse_genomes_project 6 102620617 102722841 - MGP_129S1SvImJ_P0079121 Shq1 protein_coding protein_coding MGP_129S1SvImJ_T0079122.1 MGP_129S1SvImJ_G0031086.1 mouse_genomes_project 6 102620618 102722823 - MGP_129S1SvImJ_P0079122 Shq1 protein_coding protein_coding MGP_129S1SvImJ_T0079123.1 MGP_129S1SvImJ_G0031086.1 mouse_genomes_project 6 102714525 102722817 - Shq1 protein_coding processed_transcript MGP_129S1SvImJ_T0001990.1 MGP_129S1SvImJ_G0001903.1 mouse_genomes_project 6 44045673 44046232 + TEC TEC MGP_129S1SvImJ_T0078269.1 MGP_129S1SvImJ_G0030921.1 mouse_genomes_project 6 84126483 84129000 - MGP_129S1SvImJ_P0078269 Wbp1 protein_coding protein_coding MGP_129S1SvImJ_T0078270.1 MGP_129S1SvImJ_G0030921.1 mouse_genomes_project 6 84126483 84129000 - MGP_129S1SvImJ_P0078270 Wbp1 protein_coding protein_coding MGP_129S1SvImJ_T0078271.1 MGP_129S1SvImJ_G0030921.1 mouse_genomes_project 6 84126484 84129000 - Wbp1 protein_coding retained_intron MGP_129S1SvImJ_T0078272.1 MGP_129S1SvImJ_G0030921.1 mouse_genomes_project 6 84126746 84128828 - MGP_129S1SvImJ_P0078272 Wbp1 protein_coding protein_coding MGP_129S1SvImJ_T0078273.1 MGP_129S1SvImJ_G0030921.1 mouse_genomes_project 6 84126875 84128847 - MGP_129S1SvImJ_P0078273 Wbp1 protein_coding protein_coding MGP_129S1SvImJ_T0078274.1 MGP_129S1SvImJ_G0030921.1 mouse_genomes_project 6 84126989 84127648 - MGP_129S1SvImJ_P0078274 Wbp1 protein_coding protein_coding MGP_129S1SvImJ_T0078275.1 MGP_129S1SvImJ_G0030921.1 mouse_genomes_project 6 84127074 84128319 - Wbp1 protein_coding retained_intron MGP_129S1SvImJ_T0078276.1 MGP_129S1SvImJ_G0030921.1 mouse_genomes_project 6 84127079 84128700 - Wbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0078277.1 MGP_129S1SvImJ_G0030921.1 mouse_genomes_project 6 84127998 84128715 - MGP_129S1SvImJ_P0078277 Wbp1 protein_coding protein_coding MGP_129S1SvImJ_T0080918.1 MGP_129S1SvImJ_G0031475.1 mouse_genomes_project 6 149955008 150015136 - MGP_129S1SvImJ_P0080918 Bcat1 protein_coding protein_coding MGP_129S1SvImJ_T0080919.1 MGP_129S1SvImJ_G0031475.1 mouse_genomes_project 6 149960413 150044732 - MGP_129S1SvImJ_P0080919 Bcat1 protein_coding protein_coding MGP_129S1SvImJ_T0080920.1 MGP_129S1SvImJ_G0031475.1 mouse_genomes_project 6 149965474 150044732 - MGP_129S1SvImJ_P0080920 Bcat1 protein_coding protein_coding MGP_129S1SvImJ_T0080921.1 MGP_129S1SvImJ_G0031475.1 mouse_genomes_project 6 149965754 150001624 - Bcat1 protein_coding processed_transcript MGP_129S1SvImJ_T0080922.1 MGP_129S1SvImJ_G0031475.1 mouse_genomes_project 6 149969379 150014934 - MGP_129S1SvImJ_P0080922 Bcat1 protein_coding protein_coding MGP_129S1SvImJ_T0080923.1 MGP_129S1SvImJ_G0031475.1 mouse_genomes_project 6 149978079 149998929 - MGP_129S1SvImJ_P0080923 Bcat1 protein_coding protein_coding MGP_129S1SvImJ_T0080924.1 MGP_129S1SvImJ_G0031475.1 mouse_genomes_project 6 149981506 150014179 - MGP_129S1SvImJ_P0080924 Bcat1 protein_coding protein_coding MGP_129S1SvImJ_T0080925.1 MGP_129S1SvImJ_G0031475.1 mouse_genomes_project 6 149998875 150007189 - Bcat1 protein_coding processed_transcript MGP_129S1SvImJ_T0080926.1 MGP_129S1SvImJ_G0031475.1 mouse_genomes_project 6 149998894 150013987 - MGP_129S1SvImJ_P0080926 Bcat1 protein_coding protein_coding MGP_129S1SvImJ_T0080927.1 MGP_129S1SvImJ_G0031475.1 mouse_genomes_project 6 149998958 150007301 - Bcat1 protein_coding processed_transcript MGP_129S1SvImJ_T0008585.1 MGP_129S1SvImJ_G0006943.1 mouse_genomes_project 6 37599566 37601994 + Gm43479 lincRNA lincRNA MGP_129S1SvImJ_T0002097.1 MGP_129S1SvImJ_G0002010.1 mouse_genomes_project 6 90796251 90797673 + TEC TEC MGP_129S1SvImJ_T0080178.1 MGP_129S1SvImJ_G0031286.1 mouse_genomes_project 6 128461696 128475686 + MGP_129S1SvImJ_P0080178 Nop2 protein_coding protein_coding MGP_129S1SvImJ_T0080179.1 MGP_129S1SvImJ_G0031286.1 mouse_genomes_project 6 128461820 128464492 + MGP_129S1SvImJ_P0080179 Nop2 protein_coding protein_coding MGP_129S1SvImJ_T0015455.1 MGP_129S1SvImJ_G0013544.1 mouse_genomes_project 6 72165786 72166370 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0079784.1 MGP_129S1SvImJ_G0031203.1 mouse_genomes_project 6 123252503 123334669 + MGP_129S1SvImJ_P0079784 Kdm5a protein_coding protein_coding MGP_129S1SvImJ_T0079785.1 MGP_129S1SvImJ_G0031203.1 mouse_genomes_project 6 123252503 123311013 + MGP_129S1SvImJ_P0079785 Kdm5a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079786.1 MGP_129S1SvImJ_G0031203.1 mouse_genomes_project 6 123252511 123257983 + Kdm5a protein_coding retained_intron MGP_129S1SvImJ_T0079787.1 MGP_129S1SvImJ_G0031203.1 mouse_genomes_project 6 123252837 123310986 + MGP_129S1SvImJ_P0079787 Kdm5a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079788.1 MGP_129S1SvImJ_G0031203.1 mouse_genomes_project 6 123263191 123277889 + MGP_129S1SvImJ_P0079788 Kdm5a protein_coding protein_coding MGP_129S1SvImJ_T0079789.1 MGP_129S1SvImJ_G0031203.1 mouse_genomes_project 6 123297382 123305372 + Kdm5a protein_coding retained_intron MGP_129S1SvImJ_T0079790.1 MGP_129S1SvImJ_G0031203.1 mouse_genomes_project 6 123316528 123320377 + Kdm5a protein_coding retained_intron MGP_129S1SvImJ_T0079791.1 MGP_129S1SvImJ_G0031203.1 mouse_genomes_project 6 123320298 123329806 + Kdm5a protein_coding processed_transcript MGP_129S1SvImJ_T0099996.1 MGP_129S1SvImJ_G0038063.1 mouse_genomes_project 6 41311245 41311353 - Gm22363 snRNA snRNA MGP_129S1SvImJ_T0077770.1 MGP_129S1SvImJ_G0030802.1 mouse_genomes_project 6 57202987 57209843 - MGP_129S1SvImJ_P0077770 Pyurf protein_coding protein_coding MGP_129S1SvImJ_T0008567.1 MGP_129S1SvImJ_G0006935.1 mouse_genomes_project 6 32242015 32249177 + Gm13855 lincRNA lincRNA MGP_129S1SvImJ_T0078495.1 MGP_129S1SvImJ_G0030965.1 mouse_genomes_project 6 87139585 87144222 - MGP_129S1SvImJ_P0078495 Nat8f4 protein_coding protein_coding MGP_129S1SvImJ_T0078496.1 MGP_129S1SvImJ_G0030965.1 mouse_genomes_project 6 87139585 87146617 - MGP_129S1SvImJ_P0078496 Nat8f4 protein_coding protein_coding MGP_129S1SvImJ_T0080770.1 MGP_129S1SvImJ_G0031446.1 mouse_genomes_project 6 144659728 144713284 - MGP_129S1SvImJ_P0080770 Plcz1 protein_coding protein_coding MGP_129S1SvImJ_T0080771.1 MGP_129S1SvImJ_G0031446.1 mouse_genomes_project 6 144659777 144713258 - MGP_129S1SvImJ_P0080771 Plcz1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080772.1 MGP_129S1SvImJ_G0031446.1 mouse_genomes_project 6 144659779 144713239 - MGP_129S1SvImJ_P0080772 Plcz1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0080773.1 MGP_129S1SvImJ_G0031446.1 mouse_genomes_project 6 144691708 144713239 - MGP_129S1SvImJ_P0080773 Plcz1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0015513.1 MGP_129S1SvImJ_G0013602.1 mouse_genomes_project 6 95364661 95365534 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102644.1 MGP_129S1SvImJ_G0040477.1 mouse_genomes_project 6 132684229 132685069 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0078359.1 MGP_129S1SvImJ_G0030935.1 mouse_genomes_project 6 84660756 84674977 - MGP_129S1SvImJ_P0078359 Clec4f protein_coding protein_coding MGP_129S1SvImJ_T0078360.1 MGP_129S1SvImJ_G0030935.1 mouse_genomes_project 6 84661431 84674911 - Clec4f protein_coding processed_transcript MGP_129S1SvImJ_T0077121.1 MGP_129S1SvImJ_G0030610.1 mouse_genomes_project 6 38954082 38955095 + MGP_129S1SvImJ_P0077121 Tas2r108 protein_coding protein_coding MGP_129S1SvImJ_T0077868.1 MGP_129S1SvImJ_G0030830.1 mouse_genomes_project 6 65043220 65070730 - MGP_129S1SvImJ_P0077868 Hpgds protein_coding protein_coding MGP_129S1SvImJ_T0077869.1 MGP_129S1SvImJ_G0030830.1 mouse_genomes_project 6 65044964 65048812 - Hpgds protein_coding retained_intron MGP_129S1SvImJ_T0077870.1 MGP_129S1SvImJ_G0030830.1 mouse_genomes_project 6 65057860 65064152 - Hpgds protein_coding retained_intron MGP_129S1SvImJ_T0015271.1 MGP_129S1SvImJ_G0013360.1 mouse_genomes_project 6 7851541 7857715 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008711.1 MGP_129S1SvImJ_G0007041.1 mouse_genomes_project 6 114644730 114646542 + 1700054K19Rik lincRNA lincRNA MGP_129S1SvImJ_T0010781.1 MGP_129S1SvImJ_G0008897.1 mouse_genomes_project 6 36828251 36828320 + Mir7670 miRNA miRNA MGP_129S1SvImJ_T0002189.1 MGP_129S1SvImJ_G0002101.1 mouse_genomes_project 6 142145738 142147325 - TEC TEC MGP_129S1SvImJ_T0015314.1 MGP_129S1SvImJ_G0013403.1 mouse_genomes_project 6 31396913 31400469 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015425.1 MGP_129S1SvImJ_G0013514.1 mouse_genomes_project 6 66989081 66989376 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077207.1 MGP_129S1SvImJ_G0030647.1 mouse_genomes_project 6 40824028 40837305 - MGP_129S1SvImJ_P0077207 Fam131b protein_coding protein_coding MGP_129S1SvImJ_T0077208.1 MGP_129S1SvImJ_G0030647.1 mouse_genomes_project 6 40826875 40837134 - MGP_129S1SvImJ_P0077208 Fam131b protein_coding protein_coding MGP_129S1SvImJ_T0015572.1 MGP_129S1SvImJ_G0013661.1 mouse_genomes_project 6 117762027 117762862 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015341.1 MGP_129S1SvImJ_G0013430.1 mouse_genomes_project 6 43489785 43490682 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076722.1 MGP_129S1SvImJ_G0030534.1 mouse_genomes_project 6 28072646 28110246 - Ube2h protein_coding processed_transcript MGP_129S1SvImJ_T0076723.1 MGP_129S1SvImJ_G0030534.1 mouse_genomes_project 6 28072698 28172795 - MGP_129S1SvImJ_P0076723 Ube2h protein_coding protein_coding MGP_129S1SvImJ_T0076724.1 MGP_129S1SvImJ_G0030534.1 mouse_genomes_project 6 28072794 28172366 - MGP_129S1SvImJ_P0076724 Ube2h protein_coding protein_coding MGP_129S1SvImJ_T0076725.1 MGP_129S1SvImJ_G0030534.1 mouse_genomes_project 6 28081344 28172801 - Ube2h protein_coding processed_transcript MGP_129S1SvImJ_T0079846.1 MGP_129S1SvImJ_G0031214.1 mouse_genomes_project 6 124147832 124165323 + MGP_129S1SvImJ_P0079846 Tuba8 protein_coding protein_coding MGP_129S1SvImJ_T0076379.1 MGP_129S1SvImJ_G0030470.1 mouse_genomes_project 6 14711250 14826916 + MGP_129S1SvImJ_P0076379 Met protein_coding protein_coding MGP_129S1SvImJ_T0076380.1 MGP_129S1SvImJ_G0030470.1 mouse_genomes_project 6 14711277 14739107 + MGP_129S1SvImJ_P0076380 Met protein_coding protein_coding MGP_129S1SvImJ_T0076381.1 MGP_129S1SvImJ_G0030470.1 mouse_genomes_project 6 14711488 14825165 + MGP_129S1SvImJ_P0076381 Met protein_coding protein_coding MGP_129S1SvImJ_T0076382.1 MGP_129S1SvImJ_G0030470.1 mouse_genomes_project 6 14711557 14794468 + Met protein_coding retained_intron MGP_129S1SvImJ_T0076383.1 MGP_129S1SvImJ_G0030470.1 mouse_genomes_project 6 14738600 14824759 + MGP_129S1SvImJ_P0076383 Met protein_coding protein_coding MGP_129S1SvImJ_T0076384.1 MGP_129S1SvImJ_G0030470.1 mouse_genomes_project 6 14788616 14800266 + MGP_129S1SvImJ_P0076384 Met protein_coding protein_coding MGP_129S1SvImJ_T0076385.1 MGP_129S1SvImJ_G0030470.1 mouse_genomes_project 6 14800028 14806466 + MGP_129S1SvImJ_P0076385 Met protein_coding protein_coding MGP_129S1SvImJ_T0000195.1 MGP_129S1SvImJ_G0000150.1 mouse_genomes_project 6 70006795 70007258 - MGP_129S1SvImJ_P0000195 Igkv4-69 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0008560.1 MGP_129S1SvImJ_G0006929.1 mouse_genomes_project 6 29611298 29615210 - lincRNA lincRNA MGP_129S1SvImJ_T0015339.1 MGP_129S1SvImJ_G0013428.1 mouse_genomes_project 6 42410557 42411303 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077752.1 MGP_129S1SvImJ_G0030791.1 mouse_genomes_project 6 56649676 56650611 + MGP_129S1SvImJ_P0077752 Vmn1r12 protein_coding protein_coding MGP_129S1SvImJ_T0101285.1 MGP_129S1SvImJ_G0039352.1 mouse_genomes_project 6 127349246 127349365 + Gm22916 snoRNA snoRNA MGP_129S1SvImJ_T0008512.1 MGP_129S1SvImJ_G0006897.1 mouse_genomes_project 6 3873089 3877632 - Gm26774 lincRNA lincRNA MGP_129S1SvImJ_T0076420.1 MGP_129S1SvImJ_G0030475.1 mouse_genomes_project 6 15452012 15609517 + MGP_129S1SvImJ_P0076420 Cftr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076421.1 MGP_129S1SvImJ_G0030475.1 mouse_genomes_project 6 15452012 15609518 + MGP_129S1SvImJ_P0076421 Cftr protein_coding protein_coding MGP_129S1SvImJ_T0076422.1 MGP_129S1SvImJ_G0030475.1 mouse_genomes_project 6 15452012 15609517 + MGP_129S1SvImJ_P0076422 Cftr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076423.1 MGP_129S1SvImJ_G0030475.1 mouse_genomes_project 6 15452096 15521244 + MGP_129S1SvImJ_P0076423 Cftr protein_coding protein_coding MGP_129S1SvImJ_T0076424.1 MGP_129S1SvImJ_G0030475.1 mouse_genomes_project 6 15452149 15607788 + MGP_129S1SvImJ_P0076424 Cftr protein_coding protein_coding MGP_129S1SvImJ_T0076425.1 MGP_129S1SvImJ_G0030475.1 mouse_genomes_project 6 15541519 15550502 + Cftr protein_coding retained_intron MGP_129S1SvImJ_T0099987.1 MGP_129S1SvImJ_G0038054.1 mouse_genomes_project 6 26878111 26878277 - Gm25589 snRNA snRNA MGP_129S1SvImJ_T0078858.1 MGP_129S1SvImJ_G0031037.1 mouse_genomes_project 6 91930959 91958824 - MGP_129S1SvImJ_P0078858 Cfap100 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078859.1 MGP_129S1SvImJ_G0031037.1 mouse_genomes_project 6 91931216 91958469 - MGP_129S1SvImJ_P0078859 Cfap100 protein_coding protein_coding MGP_129S1SvImJ_T0078860.1 MGP_129S1SvImJ_G0031037.1 mouse_genomes_project 6 91931217 91958455 - MGP_129S1SvImJ_P0078860 Cfap100 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0078861.1 MGP_129S1SvImJ_G0031037.1 mouse_genomes_project 6 91931218 91958450 - MGP_129S1SvImJ_P0078861 Cfap100 protein_coding protein_coding MGP_129S1SvImJ_T0078862.1 MGP_129S1SvImJ_G0031037.1 mouse_genomes_project 6 91948371 91958834 - MGP_129S1SvImJ_P0078862 Cfap100 protein_coding protein_coding MGP_129S1SvImJ_T0078863.1 MGP_129S1SvImJ_G0031037.1 mouse_genomes_project 6 91948584 91958472 - MGP_129S1SvImJ_P0078863 Cfap100 protein_coding protein_coding MGP_129S1SvImJ_T0078864.1 MGP_129S1SvImJ_G0031037.1 mouse_genomes_project 6 91956520 91958432 - MGP_129S1SvImJ_P0078864 Cfap100 protein_coding protein_coding MGP_129S1SvImJ_T0078865.1 MGP_129S1SvImJ_G0031037.1 mouse_genomes_project 6 91957932 91958622 - Cfap100 protein_coding processed_transcript MGP_129S1SvImJ_T0005083.1 MGP_129S1SvImJ_G0004337.1 mouse_genomes_project 6 115812972 115835152 - Gm15492 antisense antisense MGP_129S1SvImJ_T0080258.1 MGP_129S1SvImJ_G0031301.1 mouse_genomes_project 6 129511752 129579542 - MGP_129S1SvImJ_P0080258 Ntf3 protein_coding protein_coding MGP_129S1SvImJ_T0080259.1 MGP_129S1SvImJ_G0031301.1 mouse_genomes_project 6 129511752 129577776 - MGP_129S1SvImJ_P0080259 Ntf3 protein_coding protein_coding MGP_129S1SvImJ_T0080260.1 MGP_129S1SvImJ_G0031301.1 mouse_genomes_project 6 129511752 129579737 - MGP_129S1SvImJ_P0080260 Ntf3 protein_coding protein_coding MGP_129S1SvImJ_T0002007.1 MGP_129S1SvImJ_G0001920.1 mouse_genomes_project 6 51548186 51548914 + TEC TEC MGP_129S1SvImJ_T0101248.1 MGP_129S1SvImJ_G0039315.1 mouse_genomes_project 6 56054995 56055127 - Gm22493 snoRNA snoRNA MGP_129S1SvImJ_T0078995.1 MGP_129S1SvImJ_G0031063.1 mouse_genomes_project 6 95392170 96027019 - MGP_129S1SvImJ_P0078995 Magi1 protein_coding protein_coding MGP_129S1SvImJ_T0078996.1 MGP_129S1SvImJ_G0031063.1 mouse_genomes_project 6 95392170 96027614 - MGP_129S1SvImJ_P0078996 Magi1 protein_coding protein_coding MGP_129S1SvImJ_T0078997.1 MGP_129S1SvImJ_G0031063.1 mouse_genomes_project 6 95392170 96027019 - MGP_129S1SvImJ_P0078997 Magi1 protein_coding protein_coding MGP_129S1SvImJ_T0078998.1 MGP_129S1SvImJ_G0031063.1 mouse_genomes_project 6 95394742 95641703 - MGP_129S1SvImJ_P0078998 Magi1 protein_coding protein_coding MGP_129S1SvImJ_T0078999.1 MGP_129S1SvImJ_G0031063.1 mouse_genomes_project 6 95395062 95716723 - MGP_129S1SvImJ_P0078999 Magi1 protein_coding protein_coding MGP_129S1SvImJ_T0079000.1 MGP_129S1SvImJ_G0031063.1 mouse_genomes_project 6 95398184 95641567 - MGP_129S1SvImJ_P0079000 Magi1 protein_coding protein_coding MGP_129S1SvImJ_T0079001.1 MGP_129S1SvImJ_G0031063.1 mouse_genomes_project 6 95398773 95640974 - MGP_129S1SvImJ_P0079001 Magi1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0079002.1 MGP_129S1SvImJ_G0031063.1 mouse_genomes_project 6 95399716 96027592 - MGP_129S1SvImJ_P0079002 Magi1 protein_coding protein_coding MGP_129S1SvImJ_T0079003.1 MGP_129S1SvImJ_G0031063.1 mouse_genomes_project 6 95493809 95640516 - MGP_129S1SvImJ_P0079003 Magi1 protein_coding protein_coding MGP_129S1SvImJ_T0079004.1 MGP_129S1SvImJ_G0031063.1 mouse_genomes_project 6 95506990 95515649 - MGP_129S1SvImJ_P0079004 Magi1 protein_coding protein_coding MGP_129S1SvImJ_T0079005.1 MGP_129S1SvImJ_G0031063.1 mouse_genomes_project 6 95869551 96026722 - Magi1 protein_coding processed_transcript MGP_129S1SvImJ_T0015461.1 MGP_129S1SvImJ_G0013550.1 mouse_genomes_project 6 73599760 73600346 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002184.1 MGP_129S1SvImJ_G0002096.1 mouse_genomes_project 6 141052515 141054906 + TEC TEC MGP_129S1SvImJ_T0079629.1 MGP_129S1SvImJ_G0031180.1 mouse_genomes_project 6 120618295 120642138 + MGP_129S1SvImJ_P0079629 Hnrnpf protein_coding protein_coding MGP_129S1SvImJ_T0079630.1 MGP_129S1SvImJ_G0031180.1 mouse_genomes_project 6 120624944 120642087 + MGP_129S1SvImJ_P0079630 Hnrnpf protein_coding protein_coding MGP_129S1SvImJ_T0079631.1 MGP_129S1SvImJ_G0031180.1 mouse_genomes_project 6 120635140 120643918 + MGP_129S1SvImJ_P0079631 Hnrnpf protein_coding protein_coding MGP_129S1SvImJ_T0079632.1 MGP_129S1SvImJ_G0031180.1 mouse_genomes_project 6 120635462 120643918 + MGP_129S1SvImJ_P0079632 Hnrnpf protein_coding protein_coding MGP_129S1SvImJ_T0076284.1 MGP_129S1SvImJ_G0030454.1 mouse_genomes_project 6 8906356 8913358 - MGP_129S1SvImJ_P0076284 Ndufa4 protein_coding protein_coding MGP_129S1SvImJ_T0076285.1 MGP_129S1SvImJ_G0030454.1 mouse_genomes_project 6 8906365 8913422 - Ndufa4 protein_coding retained_intron MGP_129S1SvImJ_T0077255.1 MGP_129S1SvImJ_G0030666.1 mouse_genomes_project 6 41454588 41455521 + MGP_129S1SvImJ_P0077255 Olfr447 protein_coding protein_coding MGP_129S1SvImJ_T0080211.1 MGP_129S1SvImJ_G0031291.1 mouse_genomes_project 6 128556549 128563305 + MGP_129S1SvImJ_P0080211 Vamp1 protein_coding protein_coding MGP_129S1SvImJ_T0080212.1 MGP_129S1SvImJ_G0031291.1 mouse_genomes_project 6 128556579 128563162 + MGP_129S1SvImJ_P0080212 Vamp1 protein_coding protein_coding MGP_129S1SvImJ_T0080213.1 MGP_129S1SvImJ_G0031291.1 mouse_genomes_project 6 128556579 128582188 + MGP_129S1SvImJ_P0080213 Vamp1 protein_coding protein_coding MGP_129S1SvImJ_T0080214.1 MGP_129S1SvImJ_G0031291.1 mouse_genomes_project 6 128559572 128562651 + MGP_129S1SvImJ_P0080214 Vamp1 protein_coding protein_coding MGP_129S1SvImJ_T0080216.1 MGP_129S1SvImJ_G0031291.1 mouse_genomes_project 6 128572225 128586995 + Vamp1 protein_coding processed_transcript MGP_129S1SvImJ_T0080217.1 MGP_129S1SvImJ_G0031291.1 mouse_genomes_project 6 128572225 128580873 + Vamp1 protein_coding processed_transcript MGP_129S1SvImJ_T0079622.1 MGP_129S1SvImJ_G0031179.1 mouse_genomes_project 6 120574288 120584918 + Zfp239 protein_coding processed_transcript MGP_129S1SvImJ_T0079623.1 MGP_129S1SvImJ_G0031179.1 mouse_genomes_project 6 120575265 120584879 + Zfp239 protein_coding processed_transcript MGP_129S1SvImJ_T0079624.1 MGP_129S1SvImJ_G0031179.1 mouse_genomes_project 6 120575265 120587431 + MGP_129S1SvImJ_P0079624 Zfp239 protein_coding protein_coding MGP_129S1SvImJ_T0079625.1 MGP_129S1SvImJ_G0031179.1 mouse_genomes_project 6 120575265 120586905 + MGP_129S1SvImJ_P0079625 Zfp239 protein_coding protein_coding MGP_129S1SvImJ_T0079626.1 MGP_129S1SvImJ_G0031179.1 mouse_genomes_project 6 120575272 120582699 + Zfp239 protein_coding retained_intron MGP_129S1SvImJ_T0079627.1 MGP_129S1SvImJ_G0031179.1 mouse_genomes_project 6 120575272 120584874 + Zfp239 protein_coding processed_transcript MGP_129S1SvImJ_T0079628.1 MGP_129S1SvImJ_G0031179.1 mouse_genomes_project 6 120575272 120584607 + Zfp239 protein_coding processed_transcript MGP_129S1SvImJ_T0015511.1 MGP_129S1SvImJ_G0013600.1 mouse_genomes_project 6 94217365 94218362 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0004952.1 MGP_129S1SvImJ_G0004253.1 mouse_genomes_project 6 35127553 35174708 + 1700111E14Rik antisense antisense MGP_129S1SvImJ_T0098987.1 MGP_129S1SvImJ_G0037061.1 mouse_genomes_project 6 92350099 92350414 - sense_intronic sense_intronic MGP_129S1SvImJ_T0000333.1 MGP_129S1SvImJ_G0000275.1 mouse_genomes_project 6 69770902 69771430 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0077151.1 MGP_129S1SvImJ_G0030629.1 mouse_genomes_project 6 40025958 40029251 + MGP_129S1SvImJ_P0077151 Prss2 protein_coding protein_coding MGP_129S1SvImJ_T0002594.1 MGP_129S1SvImJ_G0002495.1 mouse_genomes_project 6 40052082 40052131 + MGP_129S1SvImJ_P0002594 Trbj2-3 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0015401.1 MGP_129S1SvImJ_G0013490.1 mouse_genomes_project 6 64807832 64808502 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076496.1 MGP_129S1SvImJ_G0030489.1 mouse_genomes_project 6 21198202 21199639 - MGP_129S1SvImJ_P0076496 Rnf133 protein_coding protein_coding MGP_129S1SvImJ_T0076497.1 MGP_129S1SvImJ_G0030489.1 mouse_genomes_project 6 21198207 21199540 - MGP_129S1SvImJ_P0076497 Rnf133 protein_coding protein_coding MGP_129S1SvImJ_T0078657.1 MGP_129S1SvImJ_G0030994.1 mouse_genomes_project 6 88931681 88945634 - MGP_129S1SvImJ_P0078657 Prokr1 protein_coding protein_coding MGP_129S1SvImJ_T0078658.1 MGP_129S1SvImJ_G0030994.1 mouse_genomes_project 6 88931682 88945611 - MGP_129S1SvImJ_P0078658 Prokr1 protein_coding protein_coding MGP_129S1SvImJ_T0078659.1 MGP_129S1SvImJ_G0030994.1 mouse_genomes_project 6 88941494 88945610 - MGP_129S1SvImJ_P0078659 Prokr1 protein_coding protein_coding MGP_129S1SvImJ_T0101263.1 MGP_129S1SvImJ_G0039330.1 mouse_genomes_project 6 84875167 84875297 - Gm23014 snoRNA snoRNA MGP_129S1SvImJ_T0077336.1 MGP_129S1SvImJ_G0030691.1 mouse_genomes_project 6 46973068 46997241 - MGP_129S1SvImJ_P0077336 Zfp746 protein_coding protein_coding MGP_129S1SvImJ_T0077337.1 MGP_129S1SvImJ_G0030691.1 mouse_genomes_project 6 46973068 46997241 - MGP_129S1SvImJ_P0077337 Zfp746 protein_coding protein_coding MGP_129S1SvImJ_T0077338.1 MGP_129S1SvImJ_G0030691.1 mouse_genomes_project 6 46975424 46978034 - MGP_129S1SvImJ_P0077338 Zfp746 protein_coding protein_coding MGP_129S1SvImJ_T0077339.1 MGP_129S1SvImJ_G0030691.1 mouse_genomes_project 6 46976884 46992926 - Zfp746 protein_coding retained_intron MGP_129S1SvImJ_T0077340.1 MGP_129S1SvImJ_G0030691.1 mouse_genomes_project 6 46992269 46995858 - Zfp746 protein_coding retained_intron MGP_129S1SvImJ_T0077341.1 MGP_129S1SvImJ_G0030691.1 mouse_genomes_project 6 46995883 46997194 - Zfp746 protein_coding retained_intron MGP_129S1SvImJ_T0015521.1 MGP_129S1SvImJ_G0013610.1 mouse_genomes_project 6 97039847 97044062 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0080482.1 MGP_129S1SvImJ_G0031361.1 mouse_genomes_project 6 133503076 133562944 - MGP_129S1SvImJ_P0080482 Klra17 protein_coding protein_coding MGP_129S1SvImJ_T0080483.1 MGP_129S1SvImJ_G0031361.1 mouse_genomes_project 6 133503086 133562946 - MGP_129S1SvImJ_P0080483 Klra17 protein_coding protein_coding MGP_129S1SvImJ_T0015507.1 MGP_129S1SvImJ_G0013596.1 mouse_genomes_project 6 93195550 93195945 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0076910.1 MGP_129S1SvImJ_G0030565.1 mouse_genomes_project 6 32990439 33022881 - MGP_129S1SvImJ_P0076910 Wdr91 protein_coding protein_coding MGP_129S1SvImJ_T0076911.1 MGP_129S1SvImJ_G0030565.1 mouse_genomes_project 6 32990439 33022881 - MGP_129S1SvImJ_P0076911 Wdr91 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076912.1 MGP_129S1SvImJ_G0030565.1 mouse_genomes_project 6 33016323 33022252 - MGP_129S1SvImJ_P0076912 Wdr91 protein_coding protein_coding MGP_129S1SvImJ_T0076913.1 MGP_129S1SvImJ_G0030565.1 mouse_genomes_project 6 33018319 33022319 - MGP_129S1SvImJ_P0076913 Wdr91 protein_coding protein_coding MGP_129S1SvImJ_T0076914.1 MGP_129S1SvImJ_G0030565.1 mouse_genomes_project 6 33019951 33022220 - MGP_129S1SvImJ_P0076914 Wdr91 protein_coding protein_coding MGP_129S1SvImJ_T0076915.1 MGP_129S1SvImJ_G0030565.1 mouse_genomes_project 6 33020203 33022490 - Wdr91 protein_coding retained_intron MGP_129S1SvImJ_T0076916.1 MGP_129S1SvImJ_G0030565.1 mouse_genomes_project 6 33021103 33022493 - Wdr91 protein_coding processed_transcript MGP_129S1SvImJ_T0076917.1 MGP_129S1SvImJ_G0030565.1 mouse_genomes_project 6 33021117 33022499 - Wdr91 protein_coding processed_transcript MGP_129S1SvImJ_T0081156.1 MGP_129S1SvImJ_G0031512.1 mouse_genomes_project 6 154550253 154562183 + Bicd1 protein_coding retained_intron MGP_129S1SvImJ_T0081157.1 MGP_129S1SvImJ_G0031512.1 mouse_genomes_project 6 154550351 154708516 + MGP_129S1SvImJ_P0081157 Bicd1 protein_coding protein_coding MGP_129S1SvImJ_T0081158.1 MGP_129S1SvImJ_G0031512.1 mouse_genomes_project 6 154550383 154703081 + MGP_129S1SvImJ_P0081158 Bicd1 protein_coding protein_coding MGP_129S1SvImJ_T0081159.1 MGP_129S1SvImJ_G0031512.1 mouse_genomes_project 6 154550436 154650140 + Bicd1 protein_coding retained_intron MGP_129S1SvImJ_T0081160.1 MGP_129S1SvImJ_G0031512.1 mouse_genomes_project 6 154550796 154701981 + MGP_129S1SvImJ_P0081160 Bicd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081161.1 MGP_129S1SvImJ_G0031512.1 mouse_genomes_project 6 154550796 154701981 + MGP_129S1SvImJ_P0081161 Bicd1 protein_coding protein_coding MGP_129S1SvImJ_T0081162.1 MGP_129S1SvImJ_G0031512.1 mouse_genomes_project 6 154662049 154667536 + Bicd1 protein_coding retained_intron MGP_129S1SvImJ_T0081163.1 MGP_129S1SvImJ_G0031512.1 mouse_genomes_project 6 154665159 154669817 + MGP_129S1SvImJ_P0081163 Bicd1 protein_coding protein_coding MGP_129S1SvImJ_T0081164.1 MGP_129S1SvImJ_G0031512.1 mouse_genomes_project 6 154691173 154704119 + Bicd1 protein_coding retained_intron MGP_129S1SvImJ_T0078035.1 MGP_129S1SvImJ_G0030869.1 mouse_genomes_project 6 72847115 72856720 + MGP_129S1SvImJ_P0078035 Sftpb protein_coding protein_coding MGP_129S1SvImJ_T0078036.1 MGP_129S1SvImJ_G0030869.1 mouse_genomes_project 6 72847125 72856716 + MGP_129S1SvImJ_P0078036 Sftpb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078037.1 MGP_129S1SvImJ_G0030869.1 mouse_genomes_project 6 72847130 72855177 + MGP_129S1SvImJ_P0078037 Sftpb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078038.1 MGP_129S1SvImJ_G0030869.1 mouse_genomes_project 6 72847130 72855177 + MGP_129S1SvImJ_P0078038 Sftpb protein_coding protein_coding MGP_129S1SvImJ_T0078039.1 MGP_129S1SvImJ_G0030869.1 mouse_genomes_project 6 72848629 72856290 + Sftpb protein_coding retained_intron MGP_129S1SvImJ_T0001992.1 MGP_129S1SvImJ_G0001905.1 mouse_genomes_project 6 44257263 44260492 + TEC TEC MGP_129S1SvImJ_T0079606.1 MGP_129S1SvImJ_G0031176.1 mouse_genomes_project 6 119384896 119407586 - MGP_129S1SvImJ_P0079606 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0079607.1 MGP_129S1SvImJ_G0031176.1 mouse_genomes_project 6 119385119 119407738 - MGP_129S1SvImJ_P0079607 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0015517.1 MGP_129S1SvImJ_G0013606.1 mouse_genomes_project 6 96244826 96245045 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0077747.1 MGP_129S1SvImJ_G0030786.1 mouse_genomes_project 6 56464054 56465118 + MGP_129S1SvImJ_P0077747 Vmn1r6 protein_coding protein_coding MGP_129S1SvImJ_T0002033.1 MGP_129S1SvImJ_G0001946.1 mouse_genomes_project 6 73173800 73176299 - TEC TEC MGP_129S1SvImJ_T0000231.1 MGP_129S1SvImJ_G0000178.1 mouse_genomes_project 6 70840823 70841348 - MGP_129S1SvImJ_P0000231 Igkv6-14 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0001988.1 MGP_129S1SvImJ_G0001901.1 mouse_genomes_project 6 44021487 44022750 + TEC TEC MGP_129S1SvImJ_T0076386.1 MGP_129S1SvImJ_G0030471.1 mouse_genomes_project 6 14894322 14914601 + Capza2 protein_coding processed_transcript MGP_129S1SvImJ_T0076387.1 MGP_129S1SvImJ_G0030471.1 mouse_genomes_project 6 14895079 14925046 + MGP_129S1SvImJ_P0076387 Capza2 protein_coding protein_coding MGP_129S1SvImJ_T0076388.1 MGP_129S1SvImJ_G0030471.1 mouse_genomes_project 6 14895131 14917675 + Capza2 protein_coding retained_intron MGP_129S1SvImJ_T0076389.1 MGP_129S1SvImJ_G0030471.1 mouse_genomes_project 6 14895138 14914551 + Capza2 protein_coding processed_transcript MGP_129S1SvImJ_T0076390.1 MGP_129S1SvImJ_G0030471.1 mouse_genomes_project 6 14895206 14923668 + MGP_129S1SvImJ_P0076390 Capza2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076391.1 MGP_129S1SvImJ_G0030471.1 mouse_genomes_project 6 14895209 14918840 + MGP_129S1SvImJ_P0076391 Capza2 protein_coding protein_coding MGP_129S1SvImJ_T0076392.1 MGP_129S1SvImJ_G0030471.1 mouse_genomes_project 6 14918635 14923758 + Capza2 protein_coding retained_intron MGP_129S1SvImJ_T0076948.1 MGP_129S1SvImJ_G0030573.1 mouse_genomes_project 6 34546156 34685729 + MGP_129S1SvImJ_P0076948 Chrm2 protein_coding protein_coding MGP_129S1SvImJ_T0076949.1 MGP_129S1SvImJ_G0030573.1 mouse_genomes_project 6 34546267 34605610 + Chrm2 protein_coding processed_transcript MGP_129S1SvImJ_T0079215.1 MGP_129S1SvImJ_G0031108.1 mouse_genomes_project 6 114918412 114934547 - MGP_129S1SvImJ_P0079215 Oxtr protein_coding protein_coding MGP_129S1SvImJ_T0079216.1 MGP_129S1SvImJ_G0031108.1 mouse_genomes_project 6 114918416 114932998 - MGP_129S1SvImJ_P0079216 Oxtr protein_coding protein_coding MGP_129S1SvImJ_T0015311.1 MGP_129S1SvImJ_G0013400.1 mouse_genomes_project 6 28622695 28622926 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000053.1 MGP_129S1SvImJ_G0000043.1 mouse_genomes_project 6 41537435 41538335 + MGP_129S1SvImJ_P0000053 Gm17472 IG_LV_gene IG_LV_gene MGP_129S1SvImJ_T0011662.1 MGP_129S1SvImJ_G0009778.1 mouse_genomes_project 6 51397427 51397529 + Gm27868 misc_RNA misc_RNA MGP_129S1SvImJ_T0078474.1 MGP_129S1SvImJ_G0030955.1 mouse_genomes_project 6 86618137 86636294 + MGP_129S1SvImJ_P0078474 Cct7 protein_coding protein_coding MGP_129S1SvImJ_T0078475.1 MGP_129S1SvImJ_G0030955.1 mouse_genomes_project 6 86618642 86622526 + Cct7 protein_coding retained_intron MGP_129S1SvImJ_T0078476.1 MGP_129S1SvImJ_G0030955.1 mouse_genomes_project 6 86618675 86636101 + MGP_129S1SvImJ_P0078476 Cct7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0078477.1 MGP_129S1SvImJ_G0030955.1 mouse_genomes_project 6 86618715 86636101 + MGP_129S1SvImJ_P0078477 Cct7 protein_coding protein_coding MGP_129S1SvImJ_T0078478.1 MGP_129S1SvImJ_G0030955.1 mouse_genomes_project 6 86627361 86632729 + Cct7 protein_coding retained_intron MGP_129S1SvImJ_T0078479.1 MGP_129S1SvImJ_G0030955.1 mouse_genomes_project 6 86628394 86633756 + Cct7 protein_coding retained_intron MGP_129S1SvImJ_T0078480.1 MGP_129S1SvImJ_G0030955.1 mouse_genomes_project 6 86628775 86633907 + MGP_129S1SvImJ_P0078480 Cct7 protein_coding protein_coding MGP_129S1SvImJ_T0077673.1 MGP_129S1SvImJ_G0030768.1 mouse_genomes_project 6 54435279 54477383 + MGP_129S1SvImJ_P0077673 Gars protein_coding protein_coding MGP_129S1SvImJ_T0077674.1 MGP_129S1SvImJ_G0030768.1 mouse_genomes_project 6 54445326 54449388 + Gars protein_coding retained_intron MGP_129S1SvImJ_T0077675.1 MGP_129S1SvImJ_G0030768.1 mouse_genomes_project 6 54448516 54459273 + Gars protein_coding retained_intron MGP_129S1SvImJ_T0100019.1 MGP_129S1SvImJ_G0038086.1 mouse_genomes_project 6 115048311 115048418 - Gm23002 snRNA snRNA MGP_129S1SvImJ_T0002204.1 MGP_129S1SvImJ_G0002116.1 mouse_genomes_project 6 151261732 151264081 - TEC TEC MGP_129S1SvImJ_T0098622.1 MGP_129S1SvImJ_G0036707.1 mouse_genomes_project 6 96612168 96612311 - Gm24601 rRNA rRNA MGP_129S1SvImJ_T0078866.1 MGP_129S1SvImJ_G0031038.1 mouse_genomes_project 6 91994934 92007597 + MGP_129S1SvImJ_P0078866 Klf15 protein_coding protein_coding MGP_129S1SvImJ_T0078867.1 MGP_129S1SvImJ_G0031038.1 mouse_genomes_project 6 91995032 92007597 + MGP_129S1SvImJ_P0078867 Klf15 protein_coding protein_coding MGP_129S1SvImJ_T0078868.1 MGP_129S1SvImJ_G0031038.1 mouse_genomes_project 6 91997662 92007594 + MGP_129S1SvImJ_P0078868 Klf15 protein_coding protein_coding MGP_129S1SvImJ_T0078869.1 MGP_129S1SvImJ_G0031038.1 mouse_genomes_project 6 91998758 92007594 + MGP_129S1SvImJ_P0078869 Klf15 protein_coding protein_coding MGP_129S1SvImJ_T0078870.1 MGP_129S1SvImJ_G0031038.1 mouse_genomes_project 6 91999476 92007579 + MGP_129S1SvImJ_P0078870 Klf15 protein_coding protein_coding MGP_129S1SvImJ_T0015345.1 MGP_129S1SvImJ_G0013434.1 mouse_genomes_project 6 45857858 45860848 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008723.1 MGP_129S1SvImJ_G0007051.1 mouse_genomes_project 6 120281149 120307982 - Gm45083 lincRNA lincRNA MGP_129S1SvImJ_T0002061.1 MGP_129S1SvImJ_G0001974.1 mouse_genomes_project 6 83990195 83991662 + TEC TEC MGP_129S1SvImJ_T0076770.1 MGP_129S1SvImJ_G0030543.1 mouse_genomes_project 6 28555638 28596012 - MGP_129S1SvImJ_P0076770 Cep41 protein_coding protein_coding MGP_129S1SvImJ_T0076771.1 MGP_129S1SvImJ_G0030543.1 mouse_genomes_project 6 28555640 28595956 - MGP_129S1SvImJ_P0076771 Cep41 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0076772.1 MGP_129S1SvImJ_G0030543.1 mouse_genomes_project 6 28556559 28595958 - MGP_129S1SvImJ_P0076772 Cep41 protein_coding protein_coding MGP_129S1SvImJ_T0076773.1 MGP_129S1SvImJ_G0030543.1 mouse_genomes_project 6 28556560 28571876 - Cep41 protein_coding processed_transcript MGP_129S1SvImJ_T0076774.1 MGP_129S1SvImJ_G0030543.1 mouse_genomes_project 6 28557713 28558991 - Cep41 protein_coding retained_intron MGP_129S1SvImJ_T0076775.1 MGP_129S1SvImJ_G0030543.1 mouse_genomes_project 6 28560563 28563862 - Cep41 protein_coding retained_intron MGP_129S1SvImJ_T0076776.1 MGP_129S1SvImJ_G0030543.1 mouse_genomes_project 6 28563474 28595351 - MGP_129S1SvImJ_P0076776 Cep41 protein_coding protein_coding MGP_129S1SvImJ_T0076777.1 MGP_129S1SvImJ_G0030543.1 mouse_genomes_project 6 28568548 28595939 - MGP_129S1SvImJ_P0076777 Cep41 protein_coding protein_coding MGP_129S1SvImJ_T0076778.1 MGP_129S1SvImJ_G0030543.1 mouse_genomes_project 6 28568834 28583054 - MGP_129S1SvImJ_P0076778 Cep41 protein_coding protein_coding MGP_129S1SvImJ_T0076779.1 MGP_129S1SvImJ_G0030543.1 mouse_genomes_project 6 28581608 28595963 - MGP_129S1SvImJ_P0076779 Cep41 protein_coding protein_coding MGP_129S1SvImJ_T0080835.1 MGP_129S1SvImJ_G0031460.1 mouse_genomes_project 6 147085542 147091081 + MGP_129S1SvImJ_P0080835 Iapp protein_coding protein_coding MGP_129S1SvImJ_T0080836.1 MGP_129S1SvImJ_G0031460.1 mouse_genomes_project 6 147085566 147086186 + Iapp protein_coding processed_transcript MGP_129S1SvImJ_T0001967.1 MGP_129S1SvImJ_G0001880.1 mouse_genomes_project 6 29050236 29052528 - TEC TEC MGP_129S1SvImJ_T0079211.1 MGP_129S1SvImJ_G0031106.1 mouse_genomes_project 6 114798994 114833078 - MGP_129S1SvImJ_P0079211 Ssu2 protein_coding protein_coding MGP_129S1SvImJ_T0079212.1 MGP_129S1SvImJ_G0031106.1 mouse_genomes_project 6 114810193 114822782 - Ssu2 protein_coding processed_transcript MGP_129S1SvImJ_T0079213.1 MGP_129S1SvImJ_G0031106.1 mouse_genomes_project 6 114810728 114818548 - Ssu2 protein_coding retained_intron MGP_129S1SvImJ_T0079528.1 MGP_129S1SvImJ_G0031161.1 mouse_genomes_project 6 118601815 118643136 - MGP_129S1SvImJ_P0079528 Plxnd1 protein_coding protein_coding MGP_129S1SvImJ_T0079529.1 MGP_129S1SvImJ_G0031161.1 mouse_genomes_project 6 118602645 118603849 - Plxnd1 protein_coding retained_intron MGP_129S1SvImJ_T0079530.1 MGP_129S1SvImJ_G0031161.1 mouse_genomes_project 6 118602811 118603375 - Plxnd1 protein_coding retained_intron MGP_129S1SvImJ_T0079531.1 MGP_129S1SvImJ_G0031161.1 mouse_genomes_project 6 118605573 118607038 - Plxnd1 protein_coding retained_intron MGP_129S1SvImJ_T0079532.1 MGP_129S1SvImJ_G0031161.1 mouse_genomes_project 6 118613969 118616433 - MGP_129S1SvImJ_P0079532 Plxnd1 protein_coding protein_coding MGP_129S1SvImJ_T0078714.1 MGP_129S1SvImJ_G0031005.1 mouse_genomes_project 6 89379853 89426631 - MGP_129S1SvImJ_P0078714 Rab7 protein_coding protein_coding MGP_129S1SvImJ_T0078715.1 MGP_129S1SvImJ_G0031005.1 mouse_genomes_project 6 89379864 89426378 - MGP_129S1SvImJ_P0078715 Rab7 protein_coding protein_coding MGP_129S1SvImJ_T0078716.1 MGP_129S1SvImJ_G0031005.1 mouse_genomes_project 6 89380190 89400448 - MGP_129S1SvImJ_P0078716 Rab7 protein_coding protein_coding MGP_129S1SvImJ_T0078717.1 MGP_129S1SvImJ_G0031005.1 mouse_genomes_project 6 89380552 89426606 - MGP_129S1SvImJ_P0078717 Rab7 protein_coding protein_coding MGP_129S1SvImJ_T0078718.1 MGP_129S1SvImJ_G0031005.1 mouse_genomes_project 6 89380687 89400448 - MGP_129S1SvImJ_P0078718 Rab7 protein_coding protein_coding MGP_129S1SvImJ_T0078719.1 MGP_129S1SvImJ_G0031005.1 mouse_genomes_project 6 89381111 89426559 - MGP_129S1SvImJ_P0078719 Rab7 protein_coding protein_coding MGP_129S1SvImJ_T0078720.1 MGP_129S1SvImJ_G0031005.1 mouse_genomes_project 6 89385843 89426592 - MGP_129S1SvImJ_P0078720 Rab7 protein_coding protein_coding MGP_129S1SvImJ_T0002166.1 MGP_129S1SvImJ_G0002078.1 mouse_genomes_project 6 131001114 131003331 + TEC TEC MGP_129S1SvImJ_T0008803.1 MGP_129S1SvImJ_G0007110.1 mouse_genomes_project 6 154711767 154712640 + lincRNA lincRNA MGP_129S1SvImJ_T0080607.1 MGP_129S1SvImJ_G0031414.1 mouse_genomes_project 6 139436813 139448786 - MGP_129S1SvImJ_P0080607 Gprc5d protein_coding protein_coding MGP_129S1SvImJ_T0080608.1 MGP_129S1SvImJ_G0031414.1 mouse_genomes_project 6 139436813 139448749 - MGP_129S1SvImJ_P0080608 Gprc5d protein_coding protein_coding MGP_129S1SvImJ_T0101745.1 MGP_129S1SvImJ_G0039737.1 mouse_genomes_project 6 65233975 65235045 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101746.1 MGP_129S1SvImJ_G0039737.1 mouse_genomes_project 6 65234095 65234813 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0078579.1 MGP_129S1SvImJ_G0030976.1 mouse_genomes_project 6 87710495 87731601 + MGP_129S1SvImJ_P0078579 Gm44790 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0001956.1 MGP_129S1SvImJ_G0001869.1 mouse_genomes_project 6 25118329 25122918 - TEC TEC MGP_129S1SvImJ_T0018321.1 MGP_129S1SvImJ_G0015640.1 mouse_genomes_project 6 67090380 67146692 + A430010J10Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018322.1 MGP_129S1SvImJ_G0015640.1 mouse_genomes_project 6 67090384 67091742 + A430010J10Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018323.1 MGP_129S1SvImJ_G0015640.1 mouse_genomes_project 6 67143199 67146376 + A430010J10Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018324.1 MGP_129S1SvImJ_G0015640.1 mouse_genomes_project 6 67143478 67143882 + A430010J10Rik processed_transcript pseudogene MGP_129S1SvImJ_T0077789.1 MGP_129S1SvImJ_G0030814.1 mouse_genomes_project 6 57908051 57909074 + MGP_129S1SvImJ_P0077789 Vmn1r29 protein_coding protein_coding MGP_129S1SvImJ_T0002282.1 MGP_129S1SvImJ_G0002193.1 mouse_genomes_project 7 75534061 75536261 - TEC TEC MGP_129S1SvImJ_T0102759.1 MGP_129S1SvImJ_G0040591.1 mouse_genomes_project 7 48651265 48652229 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015915.1 MGP_129S1SvImJ_G0014004.1 mouse_genomes_project 7 129425138 129425576 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015876.1 MGP_129S1SvImJ_G0013965.1 mouse_genomes_project 7 100099626 100099813 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084490.1 MGP_129S1SvImJ_G0032384.1 mouse_genomes_project 7 80966625 80986674 - MGP_129S1SvImJ_P0084490 Hapln3 protein_coding protein_coding MGP_129S1SvImJ_T0084491.1 MGP_129S1SvImJ_G0032384.1 mouse_genomes_project 7 80967261 80986651 - MGP_129S1SvImJ_P0084491 Hapln3 protein_coding protein_coding MGP_129S1SvImJ_T0084492.1 MGP_129S1SvImJ_G0032384.1 mouse_genomes_project 7 80968544 80986669 - MGP_129S1SvImJ_P0084492 Hapln3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084493.1 MGP_129S1SvImJ_G0032384.1 mouse_genomes_project 7 80973278 80984316 - Hapln3 protein_coding processed_transcript MGP_129S1SvImJ_T0081902.1 MGP_129S1SvImJ_G0031753.1 mouse_genomes_project 7 16955019 16968384 - MGP_129S1SvImJ_P0081902 Foxa3 protein_coding protein_coding MGP_129S1SvImJ_T0087528.1 MGP_129S1SvImJ_G0033219.1 mouse_genomes_project 7 146442871 146446587 - MGP_129S1SvImJ_P0087528 Irf7 protein_coding protein_coding MGP_129S1SvImJ_T0087529.1 MGP_129S1SvImJ_G0033219.1 mouse_genomes_project 7 146443348 146446647 - MGP_129S1SvImJ_P0087529 Irf7 protein_coding protein_coding MGP_129S1SvImJ_T0087530.1 MGP_129S1SvImJ_G0033219.1 mouse_genomes_project 7 146443349 146446589 - MGP_129S1SvImJ_P0087530 Irf7 protein_coding protein_coding MGP_129S1SvImJ_T0087531.1 MGP_129S1SvImJ_G0033219.1 mouse_genomes_project 7 146443352 146446588 - Irf7 protein_coding retained_intron MGP_129S1SvImJ_T0087532.1 MGP_129S1SvImJ_G0033219.1 mouse_genomes_project 7 146443597 146445458 - MGP_129S1SvImJ_P0087532 Irf7 protein_coding protein_coding MGP_129S1SvImJ_T0087533.1 MGP_129S1SvImJ_G0033219.1 mouse_genomes_project 7 146443956 146445297 - Irf7 protein_coding retained_intron MGP_129S1SvImJ_T0087534.1 MGP_129S1SvImJ_G0033219.1 mouse_genomes_project 7 146444138 146446210 - Irf7 protein_coding processed_transcript MGP_129S1SvImJ_T0087535.1 MGP_129S1SvImJ_G0033219.1 mouse_genomes_project 7 146444388 146445639 - Irf7 protein_coding retained_intron MGP_129S1SvImJ_T0087536.1 MGP_129S1SvImJ_G0033219.1 mouse_genomes_project 7 146444965 146445873 - Irf7 protein_coding retained_intron MGP_129S1SvImJ_T0087537.1 MGP_129S1SvImJ_G0033219.1 mouse_genomes_project 7 146445380 146446150 - Irf7 protein_coding retained_intron MGP_129S1SvImJ_T0087538.1 MGP_129S1SvImJ_G0033219.1 mouse_genomes_project 7 146445541 146446587 - Irf7 protein_coding processed_transcript MGP_129S1SvImJ_T0084749.1 MGP_129S1SvImJ_G0032428.1 mouse_genomes_project 7 83403016 83513895 - MGP_129S1SvImJ_P0084749 Cpeb1 protein_coding protein_coding MGP_129S1SvImJ_T0084750.1 MGP_129S1SvImJ_G0032428.1 mouse_genomes_project 7 83403018 83493376 - MGP_129S1SvImJ_P0084750 Cpeb1 protein_coding protein_coding MGP_129S1SvImJ_T0084751.1 MGP_129S1SvImJ_G0032428.1 mouse_genomes_project 7 83403019 83513895 - MGP_129S1SvImJ_P0084751 Cpeb1 protein_coding protein_coding MGP_129S1SvImJ_T0084752.1 MGP_129S1SvImJ_G0032428.1 mouse_genomes_project 7 83405311 83406501 - Cpeb1 protein_coding retained_intron MGP_129S1SvImJ_T0084753.1 MGP_129S1SvImJ_G0032428.1 mouse_genomes_project 7 83405592 83411986 - Cpeb1 protein_coding processed_transcript MGP_129S1SvImJ_T0084754.1 MGP_129S1SvImJ_G0032428.1 mouse_genomes_project 7 83417576 83428163 - Cpeb1 protein_coding retained_intron MGP_129S1SvImJ_T0084755.1 MGP_129S1SvImJ_G0032428.1 mouse_genomes_project 7 83417576 83514602 - Cpeb1 protein_coding processed_transcript MGP_129S1SvImJ_T0084756.1 MGP_129S1SvImJ_G0032428.1 mouse_genomes_project 7 83417740 83428207 - Cpeb1 protein_coding processed_transcript MGP_129S1SvImJ_T0084757.1 MGP_129S1SvImJ_G0032428.1 mouse_genomes_project 7 83493222 83514529 - Cpeb1 protein_coding processed_transcript MGP_129S1SvImJ_T0081844.1 MGP_129S1SvImJ_G0031727.1 mouse_genomes_project 7 14781266 14805662 - MGP_129S1SvImJ_P0081844 Ppp5c protein_coding protein_coding MGP_129S1SvImJ_T0081845.1 MGP_129S1SvImJ_G0031727.1 mouse_genomes_project 7 14781729 14783697 - Ppp5c protein_coding retained_intron MGP_129S1SvImJ_T0081846.1 MGP_129S1SvImJ_G0031727.1 mouse_genomes_project 7 14783766 14792052 - Ppp5c protein_coding retained_intron MGP_129S1SvImJ_T0081847.1 MGP_129S1SvImJ_G0031727.1 mouse_genomes_project 7 14784338 14805773 - Ppp5c protein_coding processed_transcript MGP_129S1SvImJ_T0081848.1 MGP_129S1SvImJ_G0031727.1 mouse_genomes_project 7 14784347 14785753 - Ppp5c protein_coding retained_intron MGP_129S1SvImJ_T0081849.1 MGP_129S1SvImJ_G0031727.1 mouse_genomes_project 7 14785141 14805743 - Ppp5c protein_coding processed_transcript MGP_129S1SvImJ_T0081850.1 MGP_129S1SvImJ_G0031727.1 mouse_genomes_project 7 14785165 14786703 - Ppp5c protein_coding retained_intron MGP_129S1SvImJ_T0081851.1 MGP_129S1SvImJ_G0031727.1 mouse_genomes_project 7 14786513 14802520 - Ppp5c protein_coding processed_transcript MGP_129S1SvImJ_T0081852.1 MGP_129S1SvImJ_G0031727.1 mouse_genomes_project 7 14792044 14805464 - Ppp5c protein_coding processed_transcript MGP_129S1SvImJ_T0081853.1 MGP_129S1SvImJ_G0031727.1 mouse_genomes_project 7 14800149 14805638 - Ppp5c protein_coding processed_transcript MGP_129S1SvImJ_T0081903.1 MGP_129S1SvImJ_G0031754.1 mouse_genomes_project 7 16969222 17001588 + MGP_129S1SvImJ_P0081903 Sympk protein_coding protein_coding MGP_129S1SvImJ_T0081904.1 MGP_129S1SvImJ_G0031754.1 mouse_genomes_project 7 16969265 16982979 + MGP_129S1SvImJ_P0081904 Sympk protein_coding protein_coding MGP_129S1SvImJ_T0081905.1 MGP_129S1SvImJ_G0031754.1 mouse_genomes_project 7 16969268 16982093 + Sympk protein_coding retained_intron MGP_129S1SvImJ_T0081906.1 MGP_129S1SvImJ_G0031754.1 mouse_genomes_project 7 16969271 16998742 + MGP_129S1SvImJ_P0081906 Sympk protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081907.1 MGP_129S1SvImJ_G0031754.1 mouse_genomes_project 7 16992642 16997040 + Sympk protein_coding processed_transcript MGP_129S1SvImJ_T0081908.1 MGP_129S1SvImJ_G0031754.1 mouse_genomes_project 7 16999325 17001583 + Sympk protein_coding processed_transcript MGP_129S1SvImJ_T0081909.1 MGP_129S1SvImJ_G0031754.1 mouse_genomes_project 7 16999392 17001589 + MGP_129S1SvImJ_P0081909 Sympk protein_coding protein_coding MGP_129S1SvImJ_T0081910.1 MGP_129S1SvImJ_G0031754.1 mouse_genomes_project 7 16999422 17000873 + Sympk protein_coding retained_intron MGP_129S1SvImJ_T0087269.1 MGP_129S1SvImJ_G0033139.1 mouse_genomes_project 7 142309529 142347114 - 9430038I01Rik protein_coding processed_transcript MGP_129S1SvImJ_T0087270.1 MGP_129S1SvImJ_G0033139.1 mouse_genomes_project 7 142309529 142347120 - MGP_129S1SvImJ_P0087270 9430038I01Rik protein_coding protein_coding MGP_129S1SvImJ_T0087271.1 MGP_129S1SvImJ_G0033139.1 mouse_genomes_project 7 142310092 142347093 - MGP_129S1SvImJ_P0087271 9430038I01Rik protein_coding protein_coding MGP_129S1SvImJ_T0087272.1 MGP_129S1SvImJ_G0033139.1 mouse_genomes_project 7 142319680 142347114 - 9430038I01Rik protein_coding retained_intron MGP_129S1SvImJ_T0087273.1 MGP_129S1SvImJ_G0033139.1 mouse_genomes_project 7 142319712 142347090 - MGP_129S1SvImJ_P0087273 9430038I01Rik protein_coding protein_coding MGP_129S1SvImJ_T0010896.1 MGP_129S1SvImJ_G0009012.1 mouse_genomes_project 7 58405618 58405720 + Mir6389 miRNA miRNA MGP_129S1SvImJ_T0005162.1 MGP_129S1SvImJ_G0004404.1 mouse_genomes_project 7 1050030 1060588 - D030047H15Rik antisense antisense MGP_129S1SvImJ_T0010869.1 MGP_129S1SvImJ_G0008985.1 mouse_genomes_project 7 25094024 25094134 + Gm25947 miRNA miRNA MGP_129S1SvImJ_T0100097.1 MGP_129S1SvImJ_G0038164.1 mouse_genomes_project 7 143061528 143061635 - Gm25798 snRNA snRNA MGP_129S1SvImJ_T0081750.1 MGP_129S1SvImJ_G0031702.1 mouse_genomes_project 7 13857877 13866766 - Dhx34 protein_coding retained_intron MGP_129S1SvImJ_T0081751.1 MGP_129S1SvImJ_G0031702.1 mouse_genomes_project 7 13857877 13884630 - MGP_129S1SvImJ_P0081751 Dhx34 protein_coding protein_coding MGP_129S1SvImJ_T0081752.1 MGP_129S1SvImJ_G0031702.1 mouse_genomes_project 7 13857951 13884625 - MGP_129S1SvImJ_P0081752 Dhx34 protein_coding protein_coding MGP_129S1SvImJ_T0081753.1 MGP_129S1SvImJ_G0031702.1 mouse_genomes_project 7 13857951 13884586 - MGP_129S1SvImJ_P0081753 Dhx34 protein_coding protein_coding MGP_129S1SvImJ_T0081754.1 MGP_129S1SvImJ_G0031702.1 mouse_genomes_project 7 13857951 13884586 - MGP_129S1SvImJ_P0081754 Dhx34 protein_coding protein_coding MGP_129S1SvImJ_T0081755.1 MGP_129S1SvImJ_G0031702.1 mouse_genomes_project 7 13857954 13884586 - MGP_129S1SvImJ_P0081755 Dhx34 protein_coding protein_coding MGP_129S1SvImJ_T0081756.1 MGP_129S1SvImJ_G0031702.1 mouse_genomes_project 7 13868552 13875993 - Dhx34 protein_coding processed_transcript MGP_129S1SvImJ_T0015914.1 MGP_129S1SvImJ_G0014003.1 mouse_genomes_project 7 129276414 129277071 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009008.1 MGP_129S1SvImJ_G0007256.1 mouse_genomes_project 7 120289369 120291468 + Gm45151 lincRNA lincRNA MGP_129S1SvImJ_T0008842.1 MGP_129S1SvImJ_G0007145.1 mouse_genomes_project 7 34406046 34415316 - Gm45096 lincRNA lincRNA MGP_129S1SvImJ_T0081691.1 MGP_129S1SvImJ_G0031682.1 mouse_genomes_project 7 11851704 11855889 - MGP_129S1SvImJ_P0081691 Obox8 protein_coding protein_coding MGP_129S1SvImJ_T0084883.1 MGP_129S1SvImJ_G0032485.1 mouse_genomes_project 7 88989852 89055937 - MGP_129S1SvImJ_P0084883 Folh1 protein_coding protein_coding MGP_129S1SvImJ_T0084884.1 MGP_129S1SvImJ_G0032485.1 mouse_genomes_project 7 88989852 89055881 - MGP_129S1SvImJ_P0084884 Folh1 protein_coding protein_coding MGP_129S1SvImJ_T0085734.1 MGP_129S1SvImJ_G0032784.1 mouse_genomes_project 7 110323756 110324707 - MGP_129S1SvImJ_P0085734 Olfr6 protein_coding protein_coding MGP_129S1SvImJ_T0005257.1 MGP_129S1SvImJ_G0004470.1 mouse_genomes_project 7 82002369 82016432 - Gm21057 antisense antisense MGP_129S1SvImJ_T0005258.1 MGP_129S1SvImJ_G0004470.1 mouse_genomes_project 7 82014951 82016452 - Gm21057 antisense antisense MGP_129S1SvImJ_T0082761.1 MGP_129S1SvImJ_G0031979.1 mouse_genomes_project 7 28157073 28158936 - MGP_129S1SvImJ_P0082761 2200002D01Rik protein_coding protein_coding MGP_129S1SvImJ_T0082762.1 MGP_129S1SvImJ_G0031979.1 mouse_genomes_project 7 28158084 28158842 - 2200002D01Rik protein_coding retained_intron MGP_129S1SvImJ_T0002297.1 MGP_129S1SvImJ_G0002208.1 mouse_genomes_project 7 81351107 81353234 + TEC TEC MGP_129S1SvImJ_T0087262.1 MGP_129S1SvImJ_G0033135.1 mouse_genomes_project 7 140388719 140548527 + MGP_129S1SvImJ_P0087262 Ptpre protein_coding protein_coding MGP_129S1SvImJ_T0082176.1 MGP_129S1SvImJ_G0031831.1 mouse_genomes_project 7 22834040 22842449 + MGP_129S1SvImJ_P0082176 Zfp428 protein_coding protein_coding MGP_129S1SvImJ_T0082177.1 MGP_129S1SvImJ_G0031831.1 mouse_genomes_project 7 22834104 22842712 + MGP_129S1SvImJ_P0082177 Zfp428 protein_coding protein_coding MGP_129S1SvImJ_T0082178.1 MGP_129S1SvImJ_G0031831.1 mouse_genomes_project 7 22834133 22842133 + MGP_129S1SvImJ_P0082178 Zfp428 protein_coding protein_coding MGP_129S1SvImJ_T0082179.1 MGP_129S1SvImJ_G0031831.1 mouse_genomes_project 7 22834164 22842710 + MGP_129S1SvImJ_P0082179 Zfp428 protein_coding protein_coding MGP_129S1SvImJ_T0102667.1 MGP_129S1SvImJ_G0040500.1 mouse_genomes_project 7 7523711 7524618 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0008964.1 MGP_129S1SvImJ_G0007229.1 mouse_genomes_project 7 84988637 84996731 + 1700010L04Rik lincRNA lincRNA MGP_129S1SvImJ_T0008965.1 MGP_129S1SvImJ_G0007229.1 mouse_genomes_project 7 84993139 84996730 + 1700010L04Rik lincRNA lincRNA MGP_129S1SvImJ_T0008966.1 MGP_129S1SvImJ_G0007229.1 mouse_genomes_project 7 84993149 84996286 + 1700010L04Rik lincRNA lincRNA MGP_129S1SvImJ_T0085448.1 MGP_129S1SvImJ_G0032621.1 mouse_genomes_project 7 105734192 105735215 + MGP_129S1SvImJ_P0085448 Olfr556 protein_coding protein_coding MGP_129S1SvImJ_T0010893.1 MGP_129S1SvImJ_G0009009.1 mouse_genomes_project 7 54667569 54667698 - Mir6238 miRNA miRNA MGP_129S1SvImJ_T0087261.1 MGP_129S1SvImJ_G0033134.1 mouse_genomes_project 7 140362968 140384523 - MGP_129S1SvImJ_P0087261 Clrn3 protein_coding protein_coding MGP_129S1SvImJ_T0085054.1 MGP_129S1SvImJ_G0032529.1 mouse_genomes_project 7 100404448 100426997 + MGP_129S1SvImJ_P0085054 Clns1a protein_coding protein_coding MGP_129S1SvImJ_T0085055.1 MGP_129S1SvImJ_G0032529.1 mouse_genomes_project 7 100404509 100420865 + Clns1a protein_coding retained_intron MGP_129S1SvImJ_T0085056.1 MGP_129S1SvImJ_G0032529.1 mouse_genomes_project 7 100425911 100428915 + Clns1a protein_coding retained_intron MGP_129S1SvImJ_T0087264.1 MGP_129S1SvImJ_G0033137.1 mouse_genomes_project 7 141815321 142055169 + MGP_129S1SvImJ_P0087264 Mgmt protein_coding protein_coding MGP_129S1SvImJ_T0081200.1 MGP_129S1SvImJ_G0031523.1 mouse_genomes_project 7 545767 555336 - MGP_129S1SvImJ_P0081200 Tfpt protein_coding protein_coding MGP_129S1SvImJ_T0081201.1 MGP_129S1SvImJ_G0031523.1 mouse_genomes_project 7 545767 555381 - MGP_129S1SvImJ_P0081201 Tfpt protein_coding protein_coding MGP_129S1SvImJ_T0081202.1 MGP_129S1SvImJ_G0031523.1 mouse_genomes_project 7 545778 554538 - MGP_129S1SvImJ_P0081202 Tfpt protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081203.1 MGP_129S1SvImJ_G0031523.1 mouse_genomes_project 7 546222 555031 - Tfpt protein_coding processed_transcript MGP_129S1SvImJ_T0081204.1 MGP_129S1SvImJ_G0031523.1 mouse_genomes_project 7 546238 555279 - MGP_129S1SvImJ_P0081204 Tfpt protein_coding protein_coding MGP_129S1SvImJ_T0081205.1 MGP_129S1SvImJ_G0031523.1 mouse_genomes_project 7 546417 555311 - MGP_129S1SvImJ_P0081205 Tfpt protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081206.1 MGP_129S1SvImJ_G0031523.1 mouse_genomes_project 7 550037 555031 - MGP_129S1SvImJ_P0081206 Tfpt protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081508.1 MGP_129S1SvImJ_G0031599.1 mouse_genomes_project 7 3352910 3379218 + MGP_129S1SvImJ_P0081508 Zfp667 protein_coding protein_coding MGP_129S1SvImJ_T0081509.1 MGP_129S1SvImJ_G0031599.1 mouse_genomes_project 7 3352924 3372294 + Zfp667 protein_coding processed_transcript MGP_129S1SvImJ_T0081510.1 MGP_129S1SvImJ_G0031599.1 mouse_genomes_project 7 3352945 3379197 + MGP_129S1SvImJ_P0081510 Zfp667 protein_coding protein_coding MGP_129S1SvImJ_T0081511.1 MGP_129S1SvImJ_G0031599.1 mouse_genomes_project 7 3354195 3379017 + MGP_129S1SvImJ_P0081511 Zfp667 protein_coding protein_coding MGP_129S1SvImJ_T0081512.1 MGP_129S1SvImJ_G0031599.1 mouse_genomes_project 7 3358489 3363323 + Zfp667 protein_coding retained_intron MGP_129S1SvImJ_T0081587.1 MGP_129S1SvImJ_G0031648.1 mouse_genomes_project 7 9953557 9983474 - MGP_129S1SvImJ_P0081587 protein_coding protein_coding MGP_129S1SvImJ_T0008990.1 MGP_129S1SvImJ_G0007248.1 mouse_genomes_project 7 112352579 112363357 - Gm26599 lincRNA lincRNA MGP_129S1SvImJ_T0083414.1 MGP_129S1SvImJ_G0032114.1 mouse_genomes_project 7 41950012 41986627 + MGP_129S1SvImJ_P0083414 Vmn2r60 protein_coding protein_coding MGP_129S1SvImJ_T0085124.1 MGP_129S1SvImJ_G0032543.1 mouse_genomes_project 7 101593200 101604608 + MGP_129S1SvImJ_P0085124 Wnt11 protein_coding protein_coding MGP_129S1SvImJ_T0085125.1 MGP_129S1SvImJ_G0032543.1 mouse_genomes_project 7 101593200 101611826 + MGP_129S1SvImJ_P0085125 Wnt11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085126.1 MGP_129S1SvImJ_G0032543.1 mouse_genomes_project 7 101593219 101613210 + MGP_129S1SvImJ_P0085126 Wnt11 protein_coding protein_coding MGP_129S1SvImJ_T0085127.1 MGP_129S1SvImJ_G0032543.1 mouse_genomes_project 7 101596934 101611766 + MGP_129S1SvImJ_P0085127 Wnt11 protein_coding protein_coding MGP_129S1SvImJ_T0085128.1 MGP_129S1SvImJ_G0032543.1 mouse_genomes_project 7 101596987 101611586 + MGP_129S1SvImJ_P0085128 Wnt11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0008814.1 MGP_129S1SvImJ_G0007120.1 mouse_genomes_project 7 14631872 14635406 - 9330104G04Rik lincRNA lincRNA MGP_129S1SvImJ_T0008815.1 MGP_129S1SvImJ_G0007120.1 mouse_genomes_project 7 14633473 14635406 - 9330104G04Rik lincRNA lincRNA MGP_129S1SvImJ_T0085494.1 MGP_129S1SvImJ_G0032663.1 mouse_genomes_project 7 106646959 106647907 - MGP_129S1SvImJ_P0085494 Olfr610 protein_coding protein_coding MGP_129S1SvImJ_T0082128.1 MGP_129S1SvImJ_G0031819.1 mouse_genomes_project 7 22502574 22517420 - MGP_129S1SvImJ_P0082128 protein_coding protein_coding MGP_129S1SvImJ_T0087847.1 MGP_129S1SvImJ_G0033277.1 mouse_genomes_project 7 148917304 148938383 - MGP_129S1SvImJ_P0087847 Tnfrsf26 protein_coding protein_coding MGP_129S1SvImJ_T0015863.1 MGP_129S1SvImJ_G0013952.1 mouse_genomes_project 7 87956878 87957455 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0087123.1 MGP_129S1SvImJ_G0033100.1 mouse_genomes_project 7 135950052 135953955 - MGP_129S1SvImJ_P0087123 1700007K09Rik protein_coding protein_coding MGP_129S1SvImJ_T0087124.1 MGP_129S1SvImJ_G0033100.1 mouse_genomes_project 7 135950207 135951760 - MGP_129S1SvImJ_P0087124 1700007K09Rik protein_coding protein_coding MGP_129S1SvImJ_T0100093.1 MGP_129S1SvImJ_G0038160.1 mouse_genomes_project 7 131396139 131396246 + Gm22747 snRNA snRNA MGP_129S1SvImJ_T0082573.1 MGP_129S1SvImJ_G0031929.1 mouse_genomes_project 7 26828974 26877068 + MGP_129S1SvImJ_P0082573 Fcgbp protein_coding protein_coding MGP_129S1SvImJ_T0082574.1 MGP_129S1SvImJ_G0031929.1 mouse_genomes_project 7 26828974 26877066 + MGP_129S1SvImJ_P0082574 Fcgbp protein_coding protein_coding MGP_129S1SvImJ_T0082575.1 MGP_129S1SvImJ_G0031929.1 mouse_genomes_project 7 26829316 26846265 + Fcgbp protein_coding retained_intron MGP_129S1SvImJ_T0082577.1 MGP_129S1SvImJ_G0031929.1 mouse_genomes_project 7 26856968 26877066 + Fcgbp protein_coding retained_intron MGP_129S1SvImJ_T0082578.1 MGP_129S1SvImJ_G0031929.1 mouse_genomes_project 7 26869072 26877067 + Fcgbp protein_coding retained_intron MGP_129S1SvImJ_T0082579.1 MGP_129S1SvImJ_G0031929.1 mouse_genomes_project 7 26870873 26877067 + Fcgbp protein_coding processed_transcript MGP_129S1SvImJ_T0009059.1 MGP_129S1SvImJ_G0007291.1 mouse_genomes_project 7 139215439 139292981 - Gm4593 lincRNA lincRNA MGP_129S1SvImJ_T0009060.1 MGP_129S1SvImJ_G0007291.1 mouse_genomes_project 7 139292187 139296442 - Gm4593 lincRNA lincRNA MGP_129S1SvImJ_T0082594.1 MGP_129S1SvImJ_G0031937.1 mouse_genomes_project 7 27073240 27082803 - MGP_129S1SvImJ_P0082594 Dll3 protein_coding protein_coding MGP_129S1SvImJ_T0082595.1 MGP_129S1SvImJ_G0031937.1 mouse_genomes_project 7 27073286 27074169 - Dll3 protein_coding processed_transcript MGP_129S1SvImJ_T0082596.1 MGP_129S1SvImJ_G0031937.1 mouse_genomes_project 7 27079238 27082337 - Dll3 protein_coding retained_intron MGP_129S1SvImJ_T0005196.1 MGP_129S1SvImJ_G0004425.1 mouse_genomes_project 7 26162730 26167931 - Gm15541 antisense antisense MGP_129S1SvImJ_T0002275.1 MGP_129S1SvImJ_G0002187.1 mouse_genomes_project 7 75016219 75018261 - TEC TEC MGP_129S1SvImJ_T0085357.1 MGP_129S1SvImJ_G0032592.1 mouse_genomes_project 7 104914251 104919664 - MGP_129S1SvImJ_P0085357 Tomt protein_coding protein_coding MGP_129S1SvImJ_T0085359.1 MGP_129S1SvImJ_G0032592.1 mouse_genomes_project 7 104915696 104922238 - MGP_129S1SvImJ_P0085359 Tomt protein_coding protein_coding MGP_129S1SvImJ_T0087314.1 MGP_129S1SvImJ_G0033149.1 mouse_genomes_project 7 144259644 144278416 + MGP_129S1SvImJ_P0087314 Pwwp2b protein_coding protein_coding MGP_129S1SvImJ_T0087315.1 MGP_129S1SvImJ_G0033149.1 mouse_genomes_project 7 144259644 144278416 + MGP_129S1SvImJ_P0087315 Pwwp2b protein_coding protein_coding MGP_129S1SvImJ_T0008804.1 MGP_129S1SvImJ_G0007111.1 mouse_genomes_project 7 294923 308194 - Gm44257 lincRNA lincRNA MGP_129S1SvImJ_T0082045.1 MGP_129S1SvImJ_G0031791.1 mouse_genomes_project 7 17729275 17732434 - MGP_129S1SvImJ_P0082045 Apoc1 protein_coding protein_coding MGP_129S1SvImJ_T0082046.1 MGP_129S1SvImJ_G0031791.1 mouse_genomes_project 7 17729275 17732496 - MGP_129S1SvImJ_P0082046 Apoc1 protein_coding protein_coding MGP_129S1SvImJ_T0009065.1 MGP_129S1SvImJ_G0007294.1 mouse_genomes_project 7 145032808 145033843 - Gm2044 lincRNA lincRNA MGP_129S1SvImJ_T0015871.1 MGP_129S1SvImJ_G0013960.1 mouse_genomes_project 7 97166175 97166566 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010858.1 MGP_129S1SvImJ_G0008974.1 mouse_genomes_project 7 15401265 15401375 + Gm25068 miRNA miRNA MGP_129S1SvImJ_T0099004.1 MGP_129S1SvImJ_G0037077.1 mouse_genomes_project 7 123411098 123413401 - Gm26967 sense_intronic sense_intronic MGP_129S1SvImJ_T0087459.1 MGP_129S1SvImJ_G0033201.1 mouse_genomes_project 7 146078850 146085116 + MGP_129S1SvImJ_P0087459 Athl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087460.1 MGP_129S1SvImJ_G0033201.1 mouse_genomes_project 7 146079025 146085118 + Athl1 protein_coding retained_intron MGP_129S1SvImJ_T0087461.1 MGP_129S1SvImJ_G0033201.1 mouse_genomes_project 7 146079030 146080572 + Athl1 protein_coding processed_transcript MGP_129S1SvImJ_T0087462.1 MGP_129S1SvImJ_G0033201.1 mouse_genomes_project 7 146079040 146085124 + MGP_129S1SvImJ_P0087462 Athl1 protein_coding protein_coding MGP_129S1SvImJ_T0087463.1 MGP_129S1SvImJ_G0033201.1 mouse_genomes_project 7 146079769 146084304 + MGP_129S1SvImJ_P0087463 Athl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087464.1 MGP_129S1SvImJ_G0033201.1 mouse_genomes_project 7 146079995 146085120 + MGP_129S1SvImJ_P0087464 Athl1 protein_coding protein_coding MGP_129S1SvImJ_T0081863.1 MGP_129S1SvImJ_G0031732.1 mouse_genomes_project 7 15542091 15589904 + MGP_129S1SvImJ_P0081863 Ceacam5 protein_coding protein_coding MGP_129S1SvImJ_T0085489.1 MGP_129S1SvImJ_G0032658.1 mouse_genomes_project 7 106576600 106577545 - MGP_129S1SvImJ_P0085489 protein_coding protein_coding MGP_129S1SvImJ_T0087861.1 MGP_129S1SvImJ_G0033281.1 mouse_genomes_project 7 149091447 149094730 - MGP_129S1SvImJ_P0087861 Mrgprg protein_coding protein_coding MGP_129S1SvImJ_T0082062.1 MGP_129S1SvImJ_G0031794.1 mouse_genomes_project 7 17758785 17799672 - MGP_129S1SvImJ_P0082062 Nectin2 protein_coding protein_coding MGP_129S1SvImJ_T0082063.1 MGP_129S1SvImJ_G0031794.1 mouse_genomes_project 7 17766985 17799672 - MGP_129S1SvImJ_P0082063 Nectin2 protein_coding protein_coding MGP_129S1SvImJ_T0083843.1 MGP_129S1SvImJ_G0032230.1 mouse_genomes_project 7 45840651 45861868 + MGP_129S1SvImJ_P0083843 Hsd17b14 protein_coding protein_coding MGP_129S1SvImJ_T0083844.1 MGP_129S1SvImJ_G0032230.1 mouse_genomes_project 7 45840695 45862302 + MGP_129S1SvImJ_P0083844 Hsd17b14 protein_coding protein_coding MGP_129S1SvImJ_T0083845.1 MGP_129S1SvImJ_G0032230.1 mouse_genomes_project 7 45841792 45861865 + Hsd17b14 protein_coding retained_intron MGP_129S1SvImJ_T0083846.1 MGP_129S1SvImJ_G0032230.1 mouse_genomes_project 7 45849467 45860559 + Hsd17b14 protein_coding retained_intron MGP_129S1SvImJ_T0083847.1 MGP_129S1SvImJ_G0032230.1 mouse_genomes_project 7 45852323 45860734 + Hsd17b14 protein_coding processed_transcript MGP_129S1SvImJ_T0083848.1 MGP_129S1SvImJ_G0032230.1 mouse_genomes_project 7 45852334 45861235 + Hsd17b14 protein_coding processed_transcript MGP_129S1SvImJ_T0083849.1 MGP_129S1SvImJ_G0032230.1 mouse_genomes_project 7 45853249 45860751 + Hsd17b14 protein_coding processed_transcript MGP_129S1SvImJ_T0085131.1 MGP_129S1SvImJ_G0032546.1 mouse_genomes_project 7 101996697 102016217 - MGP_129S1SvImJ_P0085131 Mogat2 protein_coding protein_coding MGP_129S1SvImJ_T0085132.1 MGP_129S1SvImJ_G0032546.1 mouse_genomes_project 7 102004217 102016192 - Mogat2 protein_coding processed_transcript MGP_129S1SvImJ_T0010949.1 MGP_129S1SvImJ_G0009065.1 mouse_genomes_project 7 140422693 140422814 + Mir1962 miRNA miRNA MGP_129S1SvImJ_T0005659.1 MGP_129S1SvImJ_G0004766.1 mouse_genomes_project 7 81837884 81839683 + 5430400D12Rik bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0018460.1 MGP_129S1SvImJ_G0015696.1 mouse_genomes_project 7 135413645 135418677 - Gm5602 processed_transcript processed_transcript MGP_129S1SvImJ_T0018454.1 MGP_129S1SvImJ_G0015693.1 mouse_genomes_project 7 132594018 132609204 - 4931431B13Rik processed_transcript antisense MGP_129S1SvImJ_T0018455.1 MGP_129S1SvImJ_G0015693.1 mouse_genomes_project 7 132607951 132609200 - 4931431B13Rik processed_transcript retained_intron MGP_129S1SvImJ_T0087239.1 MGP_129S1SvImJ_G0033126.1 mouse_genomes_project 7 138538136 138646131 + MGP_129S1SvImJ_P0087239 Fank1 protein_coding protein_coding MGP_129S1SvImJ_T0087240.1 MGP_129S1SvImJ_G0033126.1 mouse_genomes_project 7 138538166 138641543 + MGP_129S1SvImJ_P0087240 Fank1 protein_coding protein_coding MGP_129S1SvImJ_T0087241.1 MGP_129S1SvImJ_G0033126.1 mouse_genomes_project 7 138538217 138645464 + MGP_129S1SvImJ_P0087241 Fank1 protein_coding protein_coding MGP_129S1SvImJ_T0084779.1 MGP_129S1SvImJ_G0032438.1 mouse_genomes_project 7 83949411 83949673 - MGP_129S1SvImJ_P0084779 Gm10160 protein_coding protein_coding MGP_129S1SvImJ_T0098998.1 MGP_129S1SvImJ_G0037072.1 mouse_genomes_project 7 34400177 34401321 - Gm44836 sense_intronic sense_intronic MGP_129S1SvImJ_T0082270.1 MGP_129S1SvImJ_G0031854.1 mouse_genomes_project 7 23514077 23563746 - MGP_129S1SvImJ_P0082270 Pou2f2 protein_coding protein_coding MGP_129S1SvImJ_T0082271.1 MGP_129S1SvImJ_G0031854.1 mouse_genomes_project 7 23521138 23563746 - MGP_129S1SvImJ_P0082271 Pou2f2 protein_coding protein_coding MGP_129S1SvImJ_T0082272.1 MGP_129S1SvImJ_G0031854.1 mouse_genomes_project 7 23521182 23563735 - MGP_129S1SvImJ_P0082272 Pou2f2 protein_coding protein_coding MGP_129S1SvImJ_T0082273.1 MGP_129S1SvImJ_G0031854.1 mouse_genomes_project 7 23521182 23563746 - MGP_129S1SvImJ_P0082273 Pou2f2 protein_coding protein_coding MGP_129S1SvImJ_T0082274.1 MGP_129S1SvImJ_G0031854.1 mouse_genomes_project 7 23521339 23563792 - MGP_129S1SvImJ_P0082274 Pou2f2 protein_coding protein_coding MGP_129S1SvImJ_T0082275.1 MGP_129S1SvImJ_G0031854.1 mouse_genomes_project 7 23521910 23563770 - MGP_129S1SvImJ_P0082275 Pou2f2 protein_coding protein_coding MGP_129S1SvImJ_T0082276.1 MGP_129S1SvImJ_G0031854.1 mouse_genomes_project 7 23530444 23552228 - MGP_129S1SvImJ_P0082276 Pou2f2 protein_coding protein_coding MGP_129S1SvImJ_T0082277.1 MGP_129S1SvImJ_G0031854.1 mouse_genomes_project 7 23551987 23600380 - Pou2f2 protein_coding retained_intron MGP_129S1SvImJ_T0102795.1 MGP_129S1SvImJ_G0040627.1 mouse_genomes_project 7 88814564 88815259 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0018379.1 MGP_129S1SvImJ_G0015664.1 mouse_genomes_project 7 44409189 44409634 + processed_transcript lincRNA MGP_129S1SvImJ_T0018380.1 MGP_129S1SvImJ_G0015664.1 mouse_genomes_project 7 44409272 44409631 + processed_transcript retained_intron MGP_129S1SvImJ_T0018381.1 MGP_129S1SvImJ_G0015664.1 mouse_genomes_project 7 44409303 44409632 + processed_transcript retained_intron MGP_129S1SvImJ_T0085924.1 MGP_129S1SvImJ_G0032867.1 mouse_genomes_project 7 115670685 115717571 - MGP_129S1SvImJ_P0085924 Dkk3 protein_coding protein_coding MGP_129S1SvImJ_T0082205.1 MGP_129S1SvImJ_G0031840.1 mouse_genomes_project 7 23072043 23080882 + MGP_129S1SvImJ_P0082205 BC049730 protein_coding protein_coding MGP_129S1SvImJ_T0086714.1 MGP_129S1SvImJ_G0033023.1 mouse_genomes_project 7 131522093 131526434 - MGP_129S1SvImJ_P0086714 Cd2bp2 protein_coding protein_coding MGP_129S1SvImJ_T0086715.1 MGP_129S1SvImJ_G0033023.1 mouse_genomes_project 7 131522429 131526372 - MGP_129S1SvImJ_P0086715 Cd2bp2 protein_coding protein_coding MGP_129S1SvImJ_T0086716.1 MGP_129S1SvImJ_G0033023.1 mouse_genomes_project 7 131522456 131526383 - Cd2bp2 protein_coding retained_intron MGP_129S1SvImJ_T0086717.1 MGP_129S1SvImJ_G0033023.1 mouse_genomes_project 7 131522458 131526421 - MGP_129S1SvImJ_P0086717 Cd2bp2 protein_coding protein_coding MGP_129S1SvImJ_T0086718.1 MGP_129S1SvImJ_G0033023.1 mouse_genomes_project 7 131524091 131526309 - MGP_129S1SvImJ_P0086718 Cd2bp2 protein_coding protein_coding MGP_129S1SvImJ_T0086719.1 MGP_129S1SvImJ_G0033023.1 mouse_genomes_project 7 131524895 131525878 - MGP_129S1SvImJ_P0086719 Cd2bp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086720.1 MGP_129S1SvImJ_G0033023.1 mouse_genomes_project 7 131524960 131526376 - MGP_129S1SvImJ_P0086720 Cd2bp2 protein_coding protein_coding MGP_129S1SvImJ_T0086721.1 MGP_129S1SvImJ_G0033023.1 mouse_genomes_project 7 131525055 131526400 - MGP_129S1SvImJ_P0086721 Cd2bp2 protein_coding protein_coding MGP_129S1SvImJ_T0086722.1 MGP_129S1SvImJ_G0033023.1 mouse_genomes_project 7 131525525 131526484 - MGP_129S1SvImJ_P0086722 Cd2bp2 protein_coding protein_coding MGP_129S1SvImJ_T0082027.1 MGP_129S1SvImJ_G0031785.1 mouse_genomes_project 7 17606182 17609550 + MGP_129S1SvImJ_P0082027 Zfp296 protein_coding protein_coding MGP_129S1SvImJ_T0085740.1 MGP_129S1SvImJ_G0032790.1 mouse_genomes_project 7 110462912 110464042 - MGP_129S1SvImJ_P0085740 protein_coding protein_coding MGP_129S1SvImJ_T0011717.1 MGP_129S1SvImJ_G0009833.1 mouse_genomes_project 7 135049943 135050019 - Gm27884 misc_RNA misc_RNA MGP_129S1SvImJ_T0002341.1 MGP_129S1SvImJ_G0002252.1 mouse_genomes_project 7 138870164 138874622 - TEC TEC MGP_129S1SvImJ_T0098385.1 MGP_129S1SvImJ_G0036470.1 mouse_genomes_project 7 111693817 111694763 - pseudogene pseudogene MGP_129S1SvImJ_T0084861.1 MGP_129S1SvImJ_G0032465.1 mouse_genomes_project 7 87715083 87935442 - MGP_129S1SvImJ_P0084861 protein_coding protein_coding MGP_129S1SvImJ_T0085620.1 MGP_129S1SvImJ_G0032751.1 mouse_genomes_project 7 108648567 108652738 + MGP_129S1SvImJ_P0085620 Cnga4 protein_coding protein_coding MGP_129S1SvImJ_T0102813.1 MGP_129S1SvImJ_G0040645.1 mouse_genomes_project 7 107390110 107390987 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0084433.1 MGP_129S1SvImJ_G0032374.1 mouse_genomes_project 7 77120468 77422629 + MGP_129S1SvImJ_P0084433 Akap13 protein_coding protein_coding MGP_129S1SvImJ_T0084434.1 MGP_129S1SvImJ_G0032374.1 mouse_genomes_project 7 77202198 77422634 + MGP_129S1SvImJ_P0084434 Akap13 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0085605.1 MGP_129S1SvImJ_G0032743.1 mouse_genomes_project 7 108435947 108436965 - MGP_129S1SvImJ_P0085605 Olfr686 protein_coding protein_coding MGP_129S1SvImJ_T0085718.1 MGP_129S1SvImJ_G0032769.1 mouse_genomes_project 7 110044002 110044950 - MGP_129S1SvImJ_P0085718 Olfr694 protein_coding protein_coding MGP_129S1SvImJ_T0082347.1 MGP_129S1SvImJ_G0031872.1 mouse_genomes_project 7 24130400 24165377 - MGP_129S1SvImJ_P0082347 Bckdha protein_coding unknown_likely_coding MGP_129S1SvImJ_T0082348.1 MGP_129S1SvImJ_G0031872.1 mouse_genomes_project 7 24130404 24132202 - MGP_129S1SvImJ_P0082348 Bckdha protein_coding protein_coding MGP_129S1SvImJ_T0082349.1 MGP_129S1SvImJ_G0031872.1 mouse_genomes_project 7 24130404 24165618 - MGP_129S1SvImJ_P0082349 Bckdha protein_coding protein_coding MGP_129S1SvImJ_T0085107.1 MGP_129S1SvImJ_G0032541.1 mouse_genomes_project 7 101324234 101396873 - MGP_129S1SvImJ_P0085107 Emsy protein_coding protein_coding MGP_129S1SvImJ_T0085108.1 MGP_129S1SvImJ_G0032541.1 mouse_genomes_project 7 101326003 101396640 - MGP_129S1SvImJ_P0085108 Emsy protein_coding protein_coding MGP_129S1SvImJ_T0085109.1 MGP_129S1SvImJ_G0032541.1 mouse_genomes_project 7 101327667 101396645 - MGP_129S1SvImJ_P0085109 Emsy protein_coding protein_coding MGP_129S1SvImJ_T0085110.1 MGP_129S1SvImJ_G0032541.1 mouse_genomes_project 7 101328333 101331299 - Emsy protein_coding retained_intron MGP_129S1SvImJ_T0085111.1 MGP_129S1SvImJ_G0032541.1 mouse_genomes_project 7 101330562 101332079 - Emsy protein_coding processed_transcript MGP_129S1SvImJ_T0085112.1 MGP_129S1SvImJ_G0032541.1 mouse_genomes_project 7 101332187 101352545 - MGP_129S1SvImJ_P0085112 Emsy protein_coding protein_coding MGP_129S1SvImJ_T0085113.1 MGP_129S1SvImJ_G0032541.1 mouse_genomes_project 7 101333557 101340860 - Emsy protein_coding retained_intron MGP_129S1SvImJ_T0085114.1 MGP_129S1SvImJ_G0032541.1 mouse_genomes_project 7 101334107 101355088 - MGP_129S1SvImJ_P0085114 Emsy protein_coding protein_coding MGP_129S1SvImJ_T0085115.1 MGP_129S1SvImJ_G0032541.1 mouse_genomes_project 7 101339025 101341320 - Emsy protein_coding retained_intron MGP_129S1SvImJ_T0085116.1 MGP_129S1SvImJ_G0032541.1 mouse_genomes_project 7 101341128 101396689 - MGP_129S1SvImJ_P0085116 Emsy protein_coding protein_coding MGP_129S1SvImJ_T0085117.1 MGP_129S1SvImJ_G0032541.1 mouse_genomes_project 7 101370401 101396658 - MGP_129S1SvImJ_P0085117 Emsy protein_coding protein_coding MGP_129S1SvImJ_T0085118.1 MGP_129S1SvImJ_G0032541.1 mouse_genomes_project 7 101377390 101385307 - MGP_129S1SvImJ_P0085118 Emsy protein_coding protein_coding MGP_129S1SvImJ_T0085119.1 MGP_129S1SvImJ_G0032541.1 mouse_genomes_project 7 101383167 101396877 - Emsy protein_coding retained_intron MGP_129S1SvImJ_T0015820.1 MGP_129S1SvImJ_G0013909.1 mouse_genomes_project 7 57021986 57022878 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084305.1 MGP_129S1SvImJ_G0032350.1 mouse_genomes_project 7 67452168 67493926 - Lrrk1 protein_coding processed_transcript MGP_129S1SvImJ_T0084306.1 MGP_129S1SvImJ_G0032350.1 mouse_genomes_project 7 67490135 67616357 - MGP_129S1SvImJ_P0084306 Lrrk1 protein_coding protein_coding MGP_129S1SvImJ_T0084307.1 MGP_129S1SvImJ_G0032350.1 mouse_genomes_project 7 67490142 67496945 - Lrrk1 protein_coding retained_intron MGP_129S1SvImJ_T0084308.1 MGP_129S1SvImJ_G0032350.1 mouse_genomes_project 7 67490573 67515358 - MGP_129S1SvImJ_P0084308 Lrrk1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084309.1 MGP_129S1SvImJ_G0032350.1 mouse_genomes_project 7 67497563 67501178 - Lrrk1 protein_coding retained_intron MGP_129S1SvImJ_T0084310.1 MGP_129S1SvImJ_G0032350.1 mouse_genomes_project 7 67567820 67569592 - Lrrk1 protein_coding processed_transcript MGP_129S1SvImJ_T0084311.1 MGP_129S1SvImJ_G0032350.1 mouse_genomes_project 7 67567989 67616314 - Lrrk1 protein_coding retained_intron MGP_129S1SvImJ_T0015787.1 MGP_129S1SvImJ_G0013876.1 mouse_genomes_project 7 41023847 41025340 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082057.1 MGP_129S1SvImJ_G0031793.1 mouse_genomes_project 7 17741170 17757582 - MGP_129S1SvImJ_P0082057 Tomm40 protein_coding protein_coding MGP_129S1SvImJ_T0082058.1 MGP_129S1SvImJ_G0031793.1 mouse_genomes_project 7 17741188 17757569 - MGP_129S1SvImJ_P0082058 Tomm40 protein_coding protein_coding MGP_129S1SvImJ_T0082059.1 MGP_129S1SvImJ_G0031793.1 mouse_genomes_project 7 17741679 17753098 - Tomm40 protein_coding retained_intron MGP_129S1SvImJ_T0082060.1 MGP_129S1SvImJ_G0031793.1 mouse_genomes_project 7 17742725 17743201 - MGP_129S1SvImJ_P0082060 Tomm40 protein_coding protein_coding MGP_129S1SvImJ_T0082061.1 MGP_129S1SvImJ_G0031793.1 mouse_genomes_project 7 17753547 17757572 - Tomm40 protein_coding retained_intron MGP_129S1SvImJ_T0018437.1 MGP_129S1SvImJ_G0015682.1 mouse_genomes_project 7 104279446 104289929 - Gm20476 processed_transcript processed_transcript MGP_129S1SvImJ_T0086600.1 MGP_129S1SvImJ_G0033001.1 mouse_genomes_project 7 131096014 131132235 + MGP_129S1SvImJ_P0086600 Fam57b protein_coding protein_coding MGP_129S1SvImJ_T0086601.1 MGP_129S1SvImJ_G0033001.1 mouse_genomes_project 7 131111504 131122469 + Fam57b protein_coding processed_transcript MGP_129S1SvImJ_T0086602.1 MGP_129S1SvImJ_G0033001.1 mouse_genomes_project 7 131112857 131116046 + Fam57b protein_coding processed_transcript MGP_129S1SvImJ_T0086603.1 MGP_129S1SvImJ_G0033001.1 mouse_genomes_project 7 131115700 131129553 + MGP_129S1SvImJ_P0086603 Fam57b protein_coding protein_coding MGP_129S1SvImJ_T0086604.1 MGP_129S1SvImJ_G0033001.1 mouse_genomes_project 7 131115701 131132239 + MGP_129S1SvImJ_P0086604 Fam57b protein_coding protein_coding MGP_129S1SvImJ_T0086605.1 MGP_129S1SvImJ_G0033001.1 mouse_genomes_project 7 131126113 131132237 + MGP_129S1SvImJ_P0086605 Fam57b protein_coding protein_coding MGP_129S1SvImJ_T0009024.1 MGP_129S1SvImJ_G0007268.1 mouse_genomes_project 7 130465793 130491286 - Gm44875 lincRNA lincRNA MGP_129S1SvImJ_T0081573.1 MGP_129S1SvImJ_G0031640.1 mouse_genomes_project 7 9578829 9579756 + MGP_129S1SvImJ_P0081573 Vmn1r80 protein_coding protein_coding MGP_129S1SvImJ_T0008845.1 MGP_129S1SvImJ_G0007148.1 mouse_genomes_project 7 35178726 35186578 + Gm26790 lincRNA lincRNA MGP_129S1SvImJ_T0102728.1 MGP_129S1SvImJ_G0040560.1 mouse_genomes_project 7 33069051 33070328 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015873.1 MGP_129S1SvImJ_G0013962.1 mouse_genomes_project 7 98095548 98095914 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082497.1 MGP_129S1SvImJ_G0031909.1 mouse_genomes_project 7 25995442 26000214 - MGP_129S1SvImJ_P0082497 Gm20479 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0100061.1 MGP_129S1SvImJ_G0038128.1 mouse_genomes_project 7 64679649 64679750 + Gm22228 snRNA snRNA MGP_129S1SvImJ_T0018425.1 MGP_129S1SvImJ_G0015677.1 mouse_genomes_project 7 76967593 76977546 + 1500012K07Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018426.1 MGP_129S1SvImJ_G0015677.1 mouse_genomes_project 7 76967599 76987745 + 1500012K07Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018427.1 MGP_129S1SvImJ_G0015677.1 mouse_genomes_project 7 76967599 76989325 + 1500012K07Rik processed_transcript antisense MGP_129S1SvImJ_T0083972.1 MGP_129S1SvImJ_G0032266.1 mouse_genomes_project 7 47031198 47052096 - MGP_129S1SvImJ_P0083972 Tph1 protein_coding protein_coding MGP_129S1SvImJ_T0083973.1 MGP_129S1SvImJ_G0032266.1 mouse_genomes_project 7 47031229 47057247 - MGP_129S1SvImJ_P0083973 Tph1 protein_coding protein_coding MGP_129S1SvImJ_T0083974.1 MGP_129S1SvImJ_G0032266.1 mouse_genomes_project 7 47031494 47050020 - MGP_129S1SvImJ_P0083974 Tph1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083975.1 MGP_129S1SvImJ_G0032266.1 mouse_genomes_project 7 47031494 47050007 - MGP_129S1SvImJ_P0083975 Tph1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083976.1 MGP_129S1SvImJ_G0032266.1 mouse_genomes_project 7 47034484 47036163 - Tph1 protein_coding retained_intron MGP_129S1SvImJ_T0083977.1 MGP_129S1SvImJ_G0032266.1 mouse_genomes_project 7 47041579 47045386 - Tph1 protein_coding retained_intron MGP_129S1SvImJ_T0083978.1 MGP_129S1SvImJ_G0032266.1 mouse_genomes_project 7 47044737 47047034 - Tph1 protein_coding retained_intron MGP_129S1SvImJ_T0083979.1 MGP_129S1SvImJ_G0032266.1 mouse_genomes_project 7 47045055 47052062 - MGP_129S1SvImJ_P0083979 Tph1 protein_coding protein_coding MGP_129S1SvImJ_T0085874.1 MGP_129S1SvImJ_G0032858.1 mouse_genomes_project 7 114134247 114136407 + MGP_129S1SvImJ_P0085874 Adm protein_coding protein_coding MGP_129S1SvImJ_T0085875.1 MGP_129S1SvImJ_G0032858.1 mouse_genomes_project 7 114134255 114136406 + MGP_129S1SvImJ_P0085875 Adm protein_coding protein_coding MGP_129S1SvImJ_T0085876.1 MGP_129S1SvImJ_G0032858.1 mouse_genomes_project 7 114134614 114135138 + Adm protein_coding retained_intron MGP_129S1SvImJ_T0086141.1 MGP_129S1SvImJ_G0032911.1 mouse_genomes_project 7 123384267 123424141 - MGP_129S1SvImJ_P0086141 Pdilt protein_coding unknown_likely_coding MGP_129S1SvImJ_T0086142.1 MGP_129S1SvImJ_G0032911.1 mouse_genomes_project 7 123384271 123422489 - MGP_129S1SvImJ_P0086142 Pdilt protein_coding protein_coding MGP_129S1SvImJ_T0081465.1 MGP_129S1SvImJ_G0031577.1 mouse_genomes_project 7 1987286 1991040 + MGP_129S1SvImJ_P0081465 protein_coding protein_coding MGP_129S1SvImJ_T0101357.1 MGP_129S1SvImJ_G0039424.1 mouse_genomes_project 7 146573127 146573257 - Gm25725 snoRNA snoRNA MGP_129S1SvImJ_T0083935.1 MGP_129S1SvImJ_G0032255.1 mouse_genomes_project 7 46244409 46246985 - MGP_129S1SvImJ_P0083935 Emp3 protein_coding protein_coding MGP_129S1SvImJ_T0083936.1 MGP_129S1SvImJ_G0032255.1 mouse_genomes_project 7 46244409 46247562 - MGP_129S1SvImJ_P0083936 Emp3 protein_coding protein_coding MGP_129S1SvImJ_T0085717.1 MGP_129S1SvImJ_G0032768.1 mouse_genomes_project 7 110032754 110033706 - MGP_129S1SvImJ_P0085717 Olfr693 protein_coding protein_coding MGP_129S1SvImJ_T0085621.1 MGP_129S1SvImJ_G0032752.1 mouse_genomes_project 7 108672340 108719722 + MGP_129S1SvImJ_P0085621 Cckbr protein_coding protein_coding MGP_129S1SvImJ_T0085622.1 MGP_129S1SvImJ_G0032752.1 mouse_genomes_project 7 108672343 108684457 + MGP_129S1SvImJ_P0085622 Cckbr protein_coding protein_coding MGP_129S1SvImJ_T0008819.1 MGP_129S1SvImJ_G0007124.1 mouse_genomes_project 7 17628060 17634931 - Gm26890 lincRNA lincRNA MGP_129S1SvImJ_T0005315.1 MGP_129S1SvImJ_G0004510.1 mouse_genomes_project 7 131966120 131966666 - 1700120K04Rik antisense antisense MGP_129S1SvImJ_T0085442.1 MGP_129S1SvImJ_G0032615.1 mouse_genomes_project 7 105644073 105645111 + MGP_129S1SvImJ_P0085442 Olfr550 protein_coding protein_coding MGP_129S1SvImJ_T0081614.1 MGP_129S1SvImJ_G0031658.1 mouse_genomes_project 7 10364007 10371959 + MGP_129S1SvImJ_P0081614 Zfp324 protein_coding protein_coding MGP_129S1SvImJ_T0081615.1 MGP_129S1SvImJ_G0031658.1 mouse_genomes_project 7 10364014 10372373 + MGP_129S1SvImJ_P0081615 Zfp324 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081616.1 MGP_129S1SvImJ_G0031658.1 mouse_genomes_project 7 10364036 10371936 + MGP_129S1SvImJ_P0081616 Zfp324 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083047.1 MGP_129S1SvImJ_G0032045.1 mouse_genomes_project 7 29801409 29803276 + Krtdap protein_coding retained_intron MGP_129S1SvImJ_T0083048.1 MGP_129S1SvImJ_G0032045.1 mouse_genomes_project 7 29801418 29804582 + MGP_129S1SvImJ_P0083048 Krtdap protein_coding protein_coding MGP_129S1SvImJ_T0083049.1 MGP_129S1SvImJ_G0032045.1 mouse_genomes_project 7 29801418 29804598 + MGP_129S1SvImJ_P0083049 Krtdap protein_coding protein_coding MGP_129S1SvImJ_T0083050.1 MGP_129S1SvImJ_G0032045.1 mouse_genomes_project 7 29801418 29804604 + MGP_129S1SvImJ_P0083050 Krtdap protein_coding protein_coding MGP_129S1SvImJ_T0083051.1 MGP_129S1SvImJ_G0032045.1 mouse_genomes_project 7 29801418 29804612 + MGP_129S1SvImJ_P0083051 Krtdap protein_coding protein_coding MGP_129S1SvImJ_T0083052.1 MGP_129S1SvImJ_G0032045.1 mouse_genomes_project 7 29801418 29804600 + MGP_129S1SvImJ_P0083052 Krtdap protein_coding protein_coding MGP_129S1SvImJ_T0083053.1 MGP_129S1SvImJ_G0032045.1 mouse_genomes_project 7 29803314 29804600 + Krtdap protein_coding retained_intron MGP_129S1SvImJ_T0083054.1 MGP_129S1SvImJ_G0032045.1 mouse_genomes_project 7 29803366 29804598 + Krtdap protein_coding retained_intron MGP_129S1SvImJ_T0083055.1 MGP_129S1SvImJ_G0032045.1 mouse_genomes_project 7 29803989 29804600 + Krtdap protein_coding retained_intron MGP_129S1SvImJ_T0084897.1 MGP_129S1SvImJ_G0032491.1 mouse_genomes_project 7 89931619 90505878 + MGP_129S1SvImJ_P0084897 Grm5 protein_coding protein_coding MGP_129S1SvImJ_T0084898.1 MGP_129S1SvImJ_G0032491.1 mouse_genomes_project 7 89952989 90501690 + MGP_129S1SvImJ_P0084898 Grm5 protein_coding protein_coding MGP_129S1SvImJ_T0084899.1 MGP_129S1SvImJ_G0032491.1 mouse_genomes_project 7 90167056 90172958 + Grm5 protein_coding processed_transcript MGP_129S1SvImJ_T0083512.1 MGP_129S1SvImJ_G0032148.1 mouse_genomes_project 7 43986094 43991956 + MGP_129S1SvImJ_P0083512 Klk15 protein_coding protein_coding MGP_129S1SvImJ_T0083513.1 MGP_129S1SvImJ_G0032148.1 mouse_genomes_project 7 43986147 43991047 + MGP_129S1SvImJ_P0083513 Klk15 protein_coding protein_coding MGP_129S1SvImJ_T0086677.1 MGP_129S1SvImJ_G0033014.1 mouse_genomes_project 7 131329224 131331544 - MGP_129S1SvImJ_P0086677 protein_coding protein_coding MGP_129S1SvImJ_T0086680.1 MGP_129S1SvImJ_G0033014.1 mouse_genomes_project 7 131329366 131331512 - MGP_129S1SvImJ_P0086680 protein_coding protein_coding MGP_129S1SvImJ_T0086681.1 MGP_129S1SvImJ_G0033014.1 mouse_genomes_project 7 131329568 131330872 - MGP_129S1SvImJ_P0086681 protein_coding protein_coding MGP_129S1SvImJ_T0086682.1 MGP_129S1SvImJ_G0033014.1 mouse_genomes_project 7 131329597 131331509 - MGP_129S1SvImJ_P0086682 protein_coding protein_coding MGP_129S1SvImJ_T0084917.1 MGP_129S1SvImJ_G0032497.1 mouse_genomes_project 7 92038561 92039589 - MGP_129S1SvImJ_P0084917 protein_coding protein_coding MGP_129S1SvImJ_T0085768.1 MGP_129S1SvImJ_G0032811.1 mouse_genomes_project 7 111466430 111471734 + MGP_129S1SvImJ_P0085768 Olfr483 protein_coding protein_coding MGP_129S1SvImJ_T0081713.1 MGP_129S1SvImJ_G0031692.1 mouse_genomes_project 7 13509003 13533637 + MGP_129S1SvImJ_P0081713 Crxos protein_coding protein_coding MGP_129S1SvImJ_T0081714.1 MGP_129S1SvImJ_G0031692.1 mouse_genomes_project 7 13509039 13529717 + MGP_129S1SvImJ_P0081714 Crxos protein_coding protein_coding MGP_129S1SvImJ_T0081715.1 MGP_129S1SvImJ_G0031692.1 mouse_genomes_project 7 13524936 13538234 + MGP_129S1SvImJ_P0081715 Crxos protein_coding protein_coding MGP_129S1SvImJ_T0081716.1 MGP_129S1SvImJ_G0031692.1 mouse_genomes_project 7 13524983 13530621 + MGP_129S1SvImJ_P0081716 Crxos protein_coding protein_coding MGP_129S1SvImJ_T0009051.1 MGP_129S1SvImJ_G0007285.1 mouse_genomes_project 7 134458778 134476452 + Gm4265 lincRNA lincRNA MGP_129S1SvImJ_T0084504.1 MGP_129S1SvImJ_G0032386.1 mouse_genomes_project 7 81148965 81237882 + MGP_129S1SvImJ_P0084504 Abhd2 protein_coding protein_coding MGP_129S1SvImJ_T0084505.1 MGP_129S1SvImJ_G0032386.1 mouse_genomes_project 7 81149020 81217791 + Abhd2 protein_coding processed_transcript MGP_129S1SvImJ_T0008951.1 MGP_129S1SvImJ_G0007224.1 mouse_genomes_project 7 81469323 81470636 - Gm45168 lincRNA lincRNA MGP_129S1SvImJ_T0008952.1 MGP_129S1SvImJ_G0007224.1 mouse_genomes_project 7 81469464 81470647 - Gm45168 lincRNA lincRNA MGP_129S1SvImJ_T0015749.1 MGP_129S1SvImJ_G0013838.1 mouse_genomes_project 7 23026194 23026599 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082446.1 MGP_129S1SvImJ_G0031900.1 mouse_genomes_project 7 25797318 25798725 - MGP_129S1SvImJ_P0082446 Mia protein_coding protein_coding MGP_129S1SvImJ_T0082447.1 MGP_129S1SvImJ_G0031900.1 mouse_genomes_project 7 25797320 25798703 - Mia protein_coding retained_intron MGP_129S1SvImJ_T0082448.1 MGP_129S1SvImJ_G0031900.1 mouse_genomes_project 7 25797320 25798733 - MGP_129S1SvImJ_P0082448 Mia protein_coding protein_coding MGP_129S1SvImJ_T0082449.1 MGP_129S1SvImJ_G0031900.1 mouse_genomes_project 7 25798065 25798572 - Mia protein_coding processed_transcript MGP_129S1SvImJ_T0015840.1 MGP_129S1SvImJ_G0013929.1 mouse_genomes_project 7 71929734 71930744 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102673.1 MGP_129S1SvImJ_G0040506.1 mouse_genomes_project 7 7911154 7911474 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0098637.1 MGP_129S1SvImJ_G0036722.1 mouse_genomes_project 7 84886030 84886138 - n-R5s154 rRNA rRNA MGP_129S1SvImJ_T0085210.1 MGP_129S1SvImJ_G0032569.1 mouse_genomes_project 7 103353533 103366778 + Ucp3 protein_coding retained_intron MGP_129S1SvImJ_T0085211.1 MGP_129S1SvImJ_G0032569.1 mouse_genomes_project 7 103353534 103367782 + MGP_129S1SvImJ_P0085211 Ucp3 protein_coding protein_coding MGP_129S1SvImJ_T0085212.1 MGP_129S1SvImJ_G0032569.1 mouse_genomes_project 7 103353536 103366658 + MGP_129S1SvImJ_P0085212 Ucp3 protein_coding protein_coding MGP_129S1SvImJ_T0085213.1 MGP_129S1SvImJ_G0032569.1 mouse_genomes_project 7 103353537 103366761 + Ucp3 protein_coding retained_intron MGP_129S1SvImJ_T0084767.1 MGP_129S1SvImJ_G0032433.1 mouse_genomes_project 7 83670191 83787452 - MGP_129S1SvImJ_P0084767 Homer2 protein_coding protein_coding MGP_129S1SvImJ_T0084768.1 MGP_129S1SvImJ_G0032433.1 mouse_genomes_project 7 83670191 83773393 - MGP_129S1SvImJ_P0084768 Homer2 protein_coding protein_coding MGP_129S1SvImJ_T0084769.1 MGP_129S1SvImJ_G0032433.1 mouse_genomes_project 7 83680969 83787290 - MGP_129S1SvImJ_P0084769 Homer2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0086092.1 MGP_129S1SvImJ_G0032899.1 mouse_genomes_project 7 122346849 122372349 - MGP_129S1SvImJ_P0086092 Coq7 protein_coding protein_coding MGP_129S1SvImJ_T0086093.1 MGP_129S1SvImJ_G0032899.1 mouse_genomes_project 7 122364043 122372404 - MGP_129S1SvImJ_P0086093 Coq7 protein_coding protein_coding MGP_129S1SvImJ_T0086094.1 MGP_129S1SvImJ_G0032899.1 mouse_genomes_project 7 122365790 122372362 - Coq7 protein_coding retained_intron MGP_129S1SvImJ_T0085529.1 MGP_129S1SvImJ_G0032696.1 mouse_genomes_project 7 107261983 107262922 + MGP_129S1SvImJ_P0085529 Olfr641 protein_coding protein_coding MGP_129S1SvImJ_T0081828.1 MGP_129S1SvImJ_G0031720.1 mouse_genomes_project 7 14635836 14653797 + MGP_129S1SvImJ_P0081828 Dact3 protein_coding protein_coding MGP_129S1SvImJ_T0085815.1 MGP_129S1SvImJ_G0032842.1 mouse_genomes_project 7 112947538 112950766 + MGP_129S1SvImJ_P0085815 Rpl27a protein_coding protein_coding MGP_129S1SvImJ_T0085816.1 MGP_129S1SvImJ_G0032842.1 mouse_genomes_project 7 112947587 112949552 + Rpl27a protein_coding retained_intron MGP_129S1SvImJ_T0085817.1 MGP_129S1SvImJ_G0032842.1 mouse_genomes_project 7 112947590 112948571 + Rpl27a protein_coding retained_intron MGP_129S1SvImJ_T0085818.1 MGP_129S1SvImJ_G0032842.1 mouse_genomes_project 7 112947604 112950165 + Rpl27a protein_coding retained_intron MGP_129S1SvImJ_T0085819.1 MGP_129S1SvImJ_G0032842.1 mouse_genomes_project 7 112947611 112948989 + MGP_129S1SvImJ_P0085819 Rpl27a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085820.1 MGP_129S1SvImJ_G0032842.1 mouse_genomes_project 7 112947661 112948330 + Rpl27a protein_coding retained_intron MGP_129S1SvImJ_T0010863.1 MGP_129S1SvImJ_G0008979.1 mouse_genomes_project 7 22649767 22651426 - miRNA miRNA MGP_129S1SvImJ_T0085005.1 MGP_129S1SvImJ_G0032520.1 mouse_genomes_project 7 99989269 100013068 - MGP_129S1SvImJ_P0085005 Usp35 protein_coding protein_coding MGP_129S1SvImJ_T0085006.1 MGP_129S1SvImJ_G0032520.1 mouse_genomes_project 7 99989269 100007011 - MGP_129S1SvImJ_P0085006 Usp35 protein_coding protein_coding MGP_129S1SvImJ_T0085007.1 MGP_129S1SvImJ_G0032520.1 mouse_genomes_project 7 99989295 99995884 - Usp35 protein_coding processed_transcript MGP_129S1SvImJ_T0085008.1 MGP_129S1SvImJ_G0032520.1 mouse_genomes_project 7 99992362 99994915 - Usp35 protein_coding retained_intron MGP_129S1SvImJ_T0085009.1 MGP_129S1SvImJ_G0032520.1 mouse_genomes_project 7 99992477 99995885 - Usp35 protein_coding processed_transcript MGP_129S1SvImJ_T0085010.1 MGP_129S1SvImJ_G0032520.1 mouse_genomes_project 7 99999078 100005440 - Usp35 protein_coding retained_intron MGP_129S1SvImJ_T0082662.1 MGP_129S1SvImJ_G0031956.1 mouse_genomes_project 7 27567851 27568302 - Mrps12 protein_coding processed_transcript MGP_129S1SvImJ_T0082663.1 MGP_129S1SvImJ_G0031956.1 mouse_genomes_project 7 27567851 27573634 - MGP_129S1SvImJ_P0082663 Mrps12 protein_coding protein_coding MGP_129S1SvImJ_T0082664.1 MGP_129S1SvImJ_G0031956.1 mouse_genomes_project 7 27567852 27573684 - MGP_129S1SvImJ_P0082664 Mrps12 protein_coding protein_coding MGP_129S1SvImJ_T0082665.1 MGP_129S1SvImJ_G0031956.1 mouse_genomes_project 7 27568126 27569056 - MGP_129S1SvImJ_P0082665 Mrps12 protein_coding protein_coding MGP_129S1SvImJ_T0087322.1 MGP_129S1SvImJ_G0033151.1 mouse_genomes_project 7 144609781 144613202 - MGP_129S1SvImJ_P0087322 Nkx6-2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087323.1 MGP_129S1SvImJ_G0033151.1 mouse_genomes_project 7 144611624 144613195 - MGP_129S1SvImJ_P0087323 Nkx6-2 protein_coding protein_coding MGP_129S1SvImJ_T0084244.1 MGP_129S1SvImJ_G0032338.1 mouse_genomes_project 7 65534067 65540219 + Mcee protein_coding processed_transcript MGP_129S1SvImJ_T0084245.1 MGP_129S1SvImJ_G0032338.1 mouse_genomes_project 7 65534104 65555110 + MGP_129S1SvImJ_P0084245 Mcee protein_coding protein_coding MGP_129S1SvImJ_T0084246.1 MGP_129S1SvImJ_G0032338.1 mouse_genomes_project 7 65534199 65555106 + MGP_129S1SvImJ_P0084246 Mcee protein_coding protein_coding MGP_129S1SvImJ_T0084247.1 MGP_129S1SvImJ_G0032338.1 mouse_genomes_project 7 65534234 65555106 + MGP_129S1SvImJ_P0084247 Mcee protein_coding protein_coding MGP_129S1SvImJ_T0082210.1 MGP_129S1SvImJ_G0031843.1 mouse_genomes_project 7 23159672 23174035 + MGP_129S1SvImJ_P0082210 Ceacam10 protein_coding protein_coding MGP_129S1SvImJ_T0082211.1 MGP_129S1SvImJ_G0031843.1 mouse_genomes_project 7 23159676 23174031 + MGP_129S1SvImJ_P0082211 Ceacam10 protein_coding protein_coding MGP_129S1SvImJ_T0082212.1 MGP_129S1SvImJ_G0031843.1 mouse_genomes_project 7 23159729 23174036 + MGP_129S1SvImJ_P0082212 Ceacam10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082213.1 MGP_129S1SvImJ_G0031843.1 mouse_genomes_project 7 23173409 23174035 + Ceacam10 protein_coding retained_intron MGP_129S1SvImJ_T0102770.1 MGP_129S1SvImJ_G0040602.1 mouse_genomes_project 7 86984162 86985178 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0081761.1 MGP_129S1SvImJ_G0031705.1 mouse_genomes_project 7 13947823 13949510 - MGP_129S1SvImJ_P0081761 Inafm1 protein_coding protein_coding MGP_129S1SvImJ_T0083379.1 MGP_129S1SvImJ_G0032103.1 mouse_genomes_project 7 37826925 37836359 - MGP_129S1SvImJ_P0083379 Pop4 protein_coding protein_coding MGP_129S1SvImJ_T0083380.1 MGP_129S1SvImJ_G0032103.1 mouse_genomes_project 7 37829275 37836263 - MGP_129S1SvImJ_P0083380 Pop4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083381.1 MGP_129S1SvImJ_G0032103.1 mouse_genomes_project 7 37829345 37836305 - MGP_129S1SvImJ_P0083381 Pop4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083382.1 MGP_129S1SvImJ_G0032103.1 mouse_genomes_project 7 37830826 37836285 - Pop4 protein_coding retained_intron MGP_129S1SvImJ_T0083383.1 MGP_129S1SvImJ_G0032103.1 mouse_genomes_project 7 37831031 37836309 - MGP_129S1SvImJ_P0083383 Pop4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083384.1 MGP_129S1SvImJ_G0032103.1 mouse_genomes_project 7 37833311 37836211 - Pop4 protein_coding retained_intron MGP_129S1SvImJ_T0081471.1 MGP_129S1SvImJ_G0031583.1 mouse_genomes_project 7 2027978 2053107 + MGP_129S1SvImJ_P0081471 U2af2 protein_coding protein_coding MGP_129S1SvImJ_T0081876.1 MGP_129S1SvImJ_G0031742.1 mouse_genomes_project 7 16623796 16638023 + MGP_129S1SvImJ_P0081876 protein_coding protein_coding MGP_129S1SvImJ_T0005236.1 MGP_129S1SvImJ_G0004455.1 mouse_genomes_project 7 46941754 46959361 + Gm15700 antisense antisense MGP_129S1SvImJ_T0084036.1 MGP_129S1SvImJ_G0032288.1 mouse_genomes_project 7 48790484 48791703 - MGP_129S1SvImJ_P0084036 Mrgprb4 protein_coding protein_coding MGP_129S1SvImJ_T0009025.1 MGP_129S1SvImJ_G0007269.1 mouse_genomes_project 7 130609506 130612731 - Gm45142 lincRNA lincRNA MGP_129S1SvImJ_T0009026.1 MGP_129S1SvImJ_G0007269.1 mouse_genomes_project 7 130611756 130612753 - Gm45142 lincRNA lincRNA MGP_129S1SvImJ_T0082150.1 MGP_129S1SvImJ_G0031825.1 mouse_genomes_project 7 22664583 22670795 + MGP_129S1SvImJ_P0082150 Lypd5 protein_coding protein_coding MGP_129S1SvImJ_T0084887.1 MGP_129S1SvImJ_G0032488.1 mouse_genomes_project 7 89292695 89347824 + MGP_129S1SvImJ_P0084887 protein_coding protein_coding MGP_129S1SvImJ_T0008911.1 MGP_129S1SvImJ_G0007195.1 mouse_genomes_project 7 72832504 72872307 + Gm29295 lincRNA lincRNA MGP_129S1SvImJ_T0015831.1 MGP_129S1SvImJ_G0013920.1 mouse_genomes_project 7 64932178 64932439 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0087474.1 MGP_129S1SvImJ_G0033209.1 mouse_genomes_project 7 146242939 146260223 + MGP_129S1SvImJ_P0087474 Pkp3 protein_coding protein_coding MGP_129S1SvImJ_T0087475.1 MGP_129S1SvImJ_G0033209.1 mouse_genomes_project 7 146243868 146247368 + MGP_129S1SvImJ_P0087475 Pkp3 protein_coding protein_coding MGP_129S1SvImJ_T0087476.1 MGP_129S1SvImJ_G0033209.1 mouse_genomes_project 7 146244481 146260223 + MGP_129S1SvImJ_P0087476 Pkp3 protein_coding protein_coding MGP_129S1SvImJ_T0087477.1 MGP_129S1SvImJ_G0033209.1 mouse_genomes_project 7 146244496 146247843 + MGP_129S1SvImJ_P0087477 Pkp3 protein_coding protein_coding MGP_129S1SvImJ_T0087478.1 MGP_129S1SvImJ_G0033209.1 mouse_genomes_project 7 146244501 146247417 + MGP_129S1SvImJ_P0087478 Pkp3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087479.1 MGP_129S1SvImJ_G0033209.1 mouse_genomes_project 7 146257473 146258590 + Pkp3 protein_coding retained_intron MGP_129S1SvImJ_T0087480.1 MGP_129S1SvImJ_G0033209.1 mouse_genomes_project 7 146257858 146260220 + Pkp3 protein_coding retained_intron MGP_129S1SvImJ_T0087481.1 MGP_129S1SvImJ_G0033209.1 mouse_genomes_project 7 146257920 146258561 + Pkp3 protein_coding retained_intron MGP_129S1SvImJ_T0087482.1 MGP_129S1SvImJ_G0033209.1 mouse_genomes_project 7 146259123 146259629 + Pkp3 protein_coding retained_intron MGP_129S1SvImJ_T0087483.1 MGP_129S1SvImJ_G0033209.1 mouse_genomes_project 7 146259573 146260222 + MGP_129S1SvImJ_P0087483 Pkp3 protein_coding protein_coding MGP_129S1SvImJ_T0015835.1 MGP_129S1SvImJ_G0013924.1 mouse_genomes_project 7 67347356 67348102 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081958.1 MGP_129S1SvImJ_G0031766.1 mouse_genomes_project 7 17197021 17220977 + MGP_129S1SvImJ_P0081958 Opa3 protein_coding protein_coding MGP_129S1SvImJ_T0081959.1 MGP_129S1SvImJ_G0031766.1 mouse_genomes_project 7 17197070 17197797 + Opa3 protein_coding retained_intron MGP_129S1SvImJ_T0081960.1 MGP_129S1SvImJ_G0031766.1 mouse_genomes_project 7 17197070 17232684 + MGP_129S1SvImJ_P0081960 Opa3 protein_coding protein_coding MGP_129S1SvImJ_T0083081.1 MGP_129S1SvImJ_G0032050.1 mouse_genomes_project 7 29931956 29949470 - MGP_129S1SvImJ_P0083081 Mag protein_coding protein_coding MGP_129S1SvImJ_T0083082.1 MGP_129S1SvImJ_G0032050.1 mouse_genomes_project 7 29931963 29948968 - MGP_129S1SvImJ_P0083082 Mag protein_coding protein_coding MGP_129S1SvImJ_T0083083.1 MGP_129S1SvImJ_G0032050.1 mouse_genomes_project 7 29932311 29948949 - MGP_129S1SvImJ_P0083083 Mag protein_coding protein_coding MGP_129S1SvImJ_T0083084.1 MGP_129S1SvImJ_G0032050.1 mouse_genomes_project 7 29932366 29948949 - MGP_129S1SvImJ_P0083084 Mag protein_coding protein_coding MGP_129S1SvImJ_T0083085.1 MGP_129S1SvImJ_G0032050.1 mouse_genomes_project 7 29940667 29949511 - Mag protein_coding retained_intron MGP_129S1SvImJ_T0083086.1 MGP_129S1SvImJ_G0032050.1 mouse_genomes_project 7 29943836 29949503 - MGP_129S1SvImJ_P0083086 Mag protein_coding protein_coding MGP_129S1SvImJ_T0083087.1 MGP_129S1SvImJ_G0032050.1 mouse_genomes_project 7 29946274 29949462 - MGP_129S1SvImJ_P0083087 Mag protein_coding protein_coding MGP_129S1SvImJ_T0083088.1 MGP_129S1SvImJ_G0032050.1 mouse_genomes_project 7 29946651 29949483 - Mag protein_coding processed_transcript MGP_129S1SvImJ_T0085735.1 MGP_129S1SvImJ_G0032785.1 mouse_genomes_project 7 110339872 110343892 - MGP_129S1SvImJ_P0085735 Olfr711 protein_coding protein_coding MGP_129S1SvImJ_T0010866.1 MGP_129S1SvImJ_G0008982.1 mouse_genomes_project 7 23527505 23527615 - Mir6537 miRNA miRNA MGP_129S1SvImJ_T0086654.1 MGP_129S1SvImJ_G0033008.1 mouse_genomes_project 7 131236250 131255963 + MGP_129S1SvImJ_P0086654 Kctd13 protein_coding protein_coding MGP_129S1SvImJ_T0086655.1 MGP_129S1SvImJ_G0033008.1 mouse_genomes_project 7 131237292 131250054 + Kctd13 protein_coding retained_intron MGP_129S1SvImJ_T0086656.1 MGP_129S1SvImJ_G0033008.1 mouse_genomes_project 7 131252379 131255299 + Kctd13 protein_coding retained_intron MGP_129S1SvImJ_T0100082.1 MGP_129S1SvImJ_G0038149.1 mouse_genomes_project 7 115485318 115485468 - Gm23345 snRNA snRNA MGP_129S1SvImJ_T0084816.1 MGP_129S1SvImJ_G0032447.1 mouse_genomes_project 7 85294787 85302070 + MGP_129S1SvImJ_P0084816 protein_coding protein_coding MGP_129S1SvImJ_T0082933.1 MGP_129S1SvImJ_G0032022.1 mouse_genomes_project 7 29453497 29456169 + MGP_129S1SvImJ_P0082933 Nphs1 protein_coding protein_coding MGP_129S1SvImJ_T0082934.1 MGP_129S1SvImJ_G0032022.1 mouse_genomes_project 7 29454889 29483389 + MGP_129S1SvImJ_P0082934 Nphs1 protein_coding protein_coding MGP_129S1SvImJ_T0082935.1 MGP_129S1SvImJ_G0032022.1 mouse_genomes_project 7 29469637 29479227 + Nphs1 protein_coding retained_intron MGP_129S1SvImJ_T0082936.1 MGP_129S1SvImJ_G0032022.1 mouse_genomes_project 7 29473773 29483047 + MGP_129S1SvImJ_P0082936 Nphs1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082937.1 MGP_129S1SvImJ_G0032022.1 mouse_genomes_project 7 29482420 29483154 + Nphs1 protein_coding retained_intron MGP_129S1SvImJ_T0015751.1 MGP_129S1SvImJ_G0013840.1 mouse_genomes_project 7 23069199 23069402 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085645.1 MGP_129S1SvImJ_G0032757.1 mouse_genomes_project 7 108865744 108896610 - MGP_129S1SvImJ_P0085645 Trim3 protein_coding protein_coding MGP_129S1SvImJ_T0085646.1 MGP_129S1SvImJ_G0032757.1 mouse_genomes_project 7 108871778 108896662 - MGP_129S1SvImJ_P0085646 Trim3 protein_coding protein_coding MGP_129S1SvImJ_T0085647.1 MGP_129S1SvImJ_G0032757.1 mouse_genomes_project 7 108871956 108896639 - MGP_129S1SvImJ_P0085647 Trim3 protein_coding protein_coding MGP_129S1SvImJ_T0085648.1 MGP_129S1SvImJ_G0032757.1 mouse_genomes_project 7 108872447 108873165 - Trim3 protein_coding retained_intron MGP_129S1SvImJ_T0085649.1 MGP_129S1SvImJ_G0032757.1 mouse_genomes_project 7 108873616 108874714 - Trim3 protein_coding retained_intron MGP_129S1SvImJ_T0085650.1 MGP_129S1SvImJ_G0032757.1 mouse_genomes_project 7 108878339 108879335 - Trim3 protein_coding retained_intron MGP_129S1SvImJ_T0085651.1 MGP_129S1SvImJ_G0032757.1 mouse_genomes_project 7 108880092 108896627 - MGP_129S1SvImJ_P0085651 Trim3 protein_coding protein_coding MGP_129S1SvImJ_T0085652.1 MGP_129S1SvImJ_G0032757.1 mouse_genomes_project 7 108880414 108896673 - Trim3 protein_coding processed_transcript MGP_129S1SvImJ_T0085653.1 MGP_129S1SvImJ_G0032757.1 mouse_genomes_project 7 108880691 108896587 - MGP_129S1SvImJ_P0085653 Trim3 protein_coding protein_coding MGP_129S1SvImJ_T0085726.1 MGP_129S1SvImJ_G0032776.1 mouse_genomes_project 7 110177356 110180613 - MGP_129S1SvImJ_P0085726 Olfr702 protein_coding protein_coding MGP_129S1SvImJ_T0098382.1 MGP_129S1SvImJ_G0036467.1 mouse_genomes_project 7 104848220 104848833 + pseudogene pseudogene MGP_129S1SvImJ_T0084810.1 MGP_129S1SvImJ_G0032445.1 mouse_genomes_project 7 84780237 84807626 + MGP_129S1SvImJ_P0084810 Efl1 protein_coding protein_coding MGP_129S1SvImJ_T0084811.1 MGP_129S1SvImJ_G0032445.1 mouse_genomes_project 7 84780237 84909343 + MGP_129S1SvImJ_P0084811 Efl1 protein_coding protein_coding MGP_129S1SvImJ_T0084812.1 MGP_129S1SvImJ_G0032445.1 mouse_genomes_project 7 84780252 84831251 + Efl1 protein_coding retained_intron MGP_129S1SvImJ_T0084813.1 MGP_129S1SvImJ_G0032445.1 mouse_genomes_project 7 84780264 84909343 + MGP_129S1SvImJ_P0084813 Efl1 protein_coding protein_coding MGP_129S1SvImJ_T0084814.1 MGP_129S1SvImJ_G0032445.1 mouse_genomes_project 7 84803300 84807615 + Efl1 protein_coding processed_transcript MGP_129S1SvImJ_T0085438.1 MGP_129S1SvImJ_G0032612.1 mouse_genomes_project 7 105599287 105600232 + MGP_129S1SvImJ_P0085438 Olfr547 protein_coding protein_coding MGP_129S1SvImJ_T0084543.1 MGP_129S1SvImJ_G0032391.1 mouse_genomes_project 7 81562964 81602181 + MGP_129S1SvImJ_P0084543 Ticrr protein_coding protein_coding MGP_129S1SvImJ_T0084544.1 MGP_129S1SvImJ_G0032391.1 mouse_genomes_project 7 81562990 81564444 + Ticrr protein_coding retained_intron MGP_129S1SvImJ_T0084545.1 MGP_129S1SvImJ_G0032391.1 mouse_genomes_project 7 81562999 81602167 + MGP_129S1SvImJ_P0084545 Ticrr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084546.1 MGP_129S1SvImJ_G0032391.1 mouse_genomes_project 7 81563013 81588531 + MGP_129S1SvImJ_P0084546 Ticrr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084547.1 MGP_129S1SvImJ_G0032391.1 mouse_genomes_project 7 81563015 81597963 + MGP_129S1SvImJ_P0084547 Ticrr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084548.1 MGP_129S1SvImJ_G0032391.1 mouse_genomes_project 7 81572357 81578456 + Ticrr protein_coding processed_transcript MGP_129S1SvImJ_T0084549.1 MGP_129S1SvImJ_G0032391.1 mouse_genomes_project 7 81573747 81578456 + Ticrr protein_coding retained_intron MGP_129S1SvImJ_T0087303.1 MGP_129S1SvImJ_G0033147.1 mouse_genomes_project 7 144102904 144216573 - MGP_129S1SvImJ_P0087303 Stk32c protein_coding protein_coding MGP_129S1SvImJ_T0087304.1 MGP_129S1SvImJ_G0033147.1 mouse_genomes_project 7 144102904 144192083 - MGP_129S1SvImJ_P0087304 Stk32c protein_coding protein_coding MGP_129S1SvImJ_T0002322.1 MGP_129S1SvImJ_G0002233.1 mouse_genomes_project 7 126558704 126561427 + TEC TEC MGP_129S1SvImJ_T0085737.1 MGP_129S1SvImJ_G0032787.1 mouse_genomes_project 7 110403282 110404257 + MGP_129S1SvImJ_P0085737 Olfr713 protein_coding protein_coding MGP_129S1SvImJ_T0085446.1 MGP_129S1SvImJ_G0032619.1 mouse_genomes_project 7 105700576 105701530 + MGP_129S1SvImJ_P0085446 Olfr554 protein_coding protein_coding MGP_129S1SvImJ_T0008971.1 MGP_129S1SvImJ_G0007234.1 mouse_genomes_project 7 95192316 95199830 + Gm26944 lincRNA lincRNA MGP_129S1SvImJ_T0084269.1 MGP_129S1SvImJ_G0032343.1 mouse_genomes_project 7 66829060 66870686 + Tarsl2 protein_coding retained_intron MGP_129S1SvImJ_T0084270.1 MGP_129S1SvImJ_G0032343.1 mouse_genomes_project 7 66829060 66878963 + MGP_129S1SvImJ_P0084270 Tarsl2 protein_coding protein_coding MGP_129S1SvImJ_T0084271.1 MGP_129S1SvImJ_G0032343.1 mouse_genomes_project 7 66843172 66845883 + Tarsl2 protein_coding retained_intron MGP_129S1SvImJ_T0084272.1 MGP_129S1SvImJ_G0032343.1 mouse_genomes_project 7 66863835 66876954 + Tarsl2 protein_coding processed_transcript MGP_129S1SvImJ_T0087454.1 MGP_129S1SvImJ_G0033199.1 mouse_genomes_project 7 146036167 146037671 - MGP_129S1SvImJ_P0087454 Cox8b protein_coding protein_coding MGP_129S1SvImJ_T0002338.1 MGP_129S1SvImJ_G0002249.1 mouse_genomes_project 7 132390929 132394250 + TEC TEC MGP_129S1SvImJ_T0008981.1 MGP_129S1SvImJ_G0007242.1 mouse_genomes_project 7 101423446 101448866 - Gm15506 lincRNA lincRNA MGP_129S1SvImJ_T0084662.1 MGP_129S1SvImJ_G0032414.1 mouse_genomes_project 7 82349366 82359542 - MGP_129S1SvImJ_P0084662 Fes protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084663.1 MGP_129S1SvImJ_G0032414.1 mouse_genomes_project 7 82349368 82352046 - Fes protein_coding retained_intron MGP_129S1SvImJ_T0084664.1 MGP_129S1SvImJ_G0032414.1 mouse_genomes_project 7 82349368 82359552 - MGP_129S1SvImJ_P0084664 Fes protein_coding protein_coding MGP_129S1SvImJ_T0084665.1 MGP_129S1SvImJ_G0032414.1 mouse_genomes_project 7 82349368 82351240 - MGP_129S1SvImJ_P0084665 Fes protein_coding protein_coding MGP_129S1SvImJ_T0084666.1 MGP_129S1SvImJ_G0032414.1 mouse_genomes_project 7 82349373 82359477 - MGP_129S1SvImJ_P0084666 Fes protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084667.1 MGP_129S1SvImJ_G0032414.1 mouse_genomes_project 7 82349374 82359547 - MGP_129S1SvImJ_P0084667 Fes protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084668.1 MGP_129S1SvImJ_G0032414.1 mouse_genomes_project 7 82349383 82359025 - MGP_129S1SvImJ_P0084668 Fes protein_coding protein_coding MGP_129S1SvImJ_T0084669.1 MGP_129S1SvImJ_G0032414.1 mouse_genomes_project 7 82355819 82359501 - MGP_129S1SvImJ_P0084669 Fes protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084670.1 MGP_129S1SvImJ_G0032414.1 mouse_genomes_project 7 82358518 82359487 - MGP_129S1SvImJ_P0084670 Fes protein_coding protein_coding MGP_129S1SvImJ_T0084671.1 MGP_129S1SvImJ_G0032414.1 mouse_genomes_project 7 82358644 82359500 - Fes protein_coding retained_intron MGP_129S1SvImJ_T0008827.1 MGP_129S1SvImJ_G0007131.1 mouse_genomes_project 7 24078231 24092063 + Gm44880 lincRNA lincRNA MGP_129S1SvImJ_T0082411.1 MGP_129S1SvImJ_G0031887.1 mouse_genomes_project 7 25098697 25140391 + MGP_129S1SvImJ_P0082411 Nlrp9a protein_coding protein_coding MGP_129S1SvImJ_T0082412.1 MGP_129S1SvImJ_G0031887.1 mouse_genomes_project 7 25098739 25140387 + MGP_129S1SvImJ_P0082412 Nlrp9a protein_coding protein_coding MGP_129S1SvImJ_T0082413.1 MGP_129S1SvImJ_G0031887.1 mouse_genomes_project 7 25098740 25134298 + MGP_129S1SvImJ_P0082413 Nlrp9a protein_coding protein_coding MGP_129S1SvImJ_T0082414.1 MGP_129S1SvImJ_G0031887.1 mouse_genomes_project 7 25098745 25131261 + Nlrp9a protein_coding processed_transcript MGP_129S1SvImJ_T0082415.1 MGP_129S1SvImJ_G0031887.1 mouse_genomes_project 7 25117027 25140230 + MGP_129S1SvImJ_P0082415 Nlrp9a protein_coding protein_coding MGP_129S1SvImJ_T0082416.1 MGP_129S1SvImJ_G0031887.1 mouse_genomes_project 7 25117027 25141970 + MGP_129S1SvImJ_P0082416 Nlrp9a protein_coding protein_coding MGP_129S1SvImJ_T0081466.1 MGP_129S1SvImJ_G0031578.1 mouse_genomes_project 7 1992372 1993498 + MGP_129S1SvImJ_P0081466 protein_coding protein_coding MGP_129S1SvImJ_T0002261.1 MGP_129S1SvImJ_G0002173.1 mouse_genomes_project 7 56821166 56825186 - TEC TEC MGP_129S1SvImJ_T0102736.1 MGP_129S1SvImJ_G0040568.1 mouse_genomes_project 7 40645098 40931115 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0098639.1 MGP_129S1SvImJ_G0036724.1 mouse_genomes_project 7 99555637 99555730 - Gm25712 rRNA rRNA MGP_129S1SvImJ_T0015740.1 MGP_129S1SvImJ_G0013829.1 mouse_genomes_project 7 15850930 15851629 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0087517.1 MGP_129S1SvImJ_G0033218.1 mouse_genomes_project 7 146406306 146442908 + MGP_129S1SvImJ_P0087517 Phrf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087518.1 MGP_129S1SvImJ_G0033218.1 mouse_genomes_project 7 146406311 146442792 + MGP_129S1SvImJ_P0087518 Phrf1 protein_coding protein_coding MGP_129S1SvImJ_T0087519.1 MGP_129S1SvImJ_G0033218.1 mouse_genomes_project 7 146411548 146425064 + MGP_129S1SvImJ_P0087519 Phrf1 protein_coding protein_coding MGP_129S1SvImJ_T0087520.1 MGP_129S1SvImJ_G0033218.1 mouse_genomes_project 7 146421245 146442761 + MGP_129S1SvImJ_P0087520 Phrf1 protein_coding protein_coding MGP_129S1SvImJ_T0087521.1 MGP_129S1SvImJ_G0033218.1 mouse_genomes_project 7 146433595 146438235 + Phrf1 protein_coding processed_transcript MGP_129S1SvImJ_T0087522.1 MGP_129S1SvImJ_G0033218.1 mouse_genomes_project 7 146436168 146437995 + Phrf1 protein_coding retained_intron MGP_129S1SvImJ_T0087523.1 MGP_129S1SvImJ_G0033218.1 mouse_genomes_project 7 146436169 146437052 + Phrf1 protein_coding retained_intron MGP_129S1SvImJ_T0087524.1 MGP_129S1SvImJ_G0033218.1 mouse_genomes_project 7 146439355 146442916 + MGP_129S1SvImJ_P0087524 Phrf1 protein_coding protein_coding MGP_129S1SvImJ_T0087525.1 MGP_129S1SvImJ_G0033218.1 mouse_genomes_project 7 146439823 146440753 + Phrf1 protein_coding processed_transcript MGP_129S1SvImJ_T0087526.1 MGP_129S1SvImJ_G0033218.1 mouse_genomes_project 7 146440562 146442913 + MGP_129S1SvImJ_P0087526 Phrf1 protein_coding protein_coding MGP_129S1SvImJ_T0087527.1 MGP_129S1SvImJ_G0033218.1 mouse_genomes_project 7 146441844 146442866 + Phrf1 protein_coding processed_transcript MGP_129S1SvImJ_T0084733.1 MGP_129S1SvImJ_G0032423.1 mouse_genomes_project 7 83012966 83069769 + MGP_129S1SvImJ_P0084733 Zfp592 protein_coding protein_coding MGP_129S1SvImJ_T0084734.1 MGP_129S1SvImJ_G0032423.1 mouse_genomes_project 7 83047154 83048328 + Zfp592 protein_coding processed_transcript MGP_129S1SvImJ_T0084735.1 MGP_129S1SvImJ_G0032423.1 mouse_genomes_project 7 83062405 83062967 + Zfp592 protein_coding retained_intron MGP_129S1SvImJ_T0084736.1 MGP_129S1SvImJ_G0032423.1 mouse_genomes_project 7 83062681 83066058 + Zfp592 protein_coding retained_intron MGP_129S1SvImJ_T0008808.1 MGP_129S1SvImJ_G0007115.1 mouse_genomes_project 7 870365 874361 - Gm44581 lincRNA lincRNA MGP_129S1SvImJ_T0084289.1 MGP_129S1SvImJ_G0032346.1 mouse_genomes_project 7 67260278 67281972 + MGP_129S1SvImJ_P0084289 Gm45213 protein_coding protein_coding MGP_129S1SvImJ_T0082486.1 MGP_129S1SvImJ_G0031907.1 mouse_genomes_project 7 25950739 25973981 - MGP_129S1SvImJ_P0082486 Ltbp4 protein_coding protein_coding MGP_129S1SvImJ_T0082156.1 MGP_129S1SvImJ_G0031827.1 mouse_genomes_project 7 22719475 22729133 + Smg9 protein_coding retained_intron MGP_129S1SvImJ_T0082157.1 MGP_129S1SvImJ_G0031827.1 mouse_genomes_project 7 22719475 22743654 + MGP_129S1SvImJ_P0082157 Smg9 protein_coding protein_coding MGP_129S1SvImJ_T0082158.1 MGP_129S1SvImJ_G0031827.1 mouse_genomes_project 7 22719578 22726546 + Smg9 protein_coding retained_intron MGP_129S1SvImJ_T0082159.1 MGP_129S1SvImJ_G0031827.1 mouse_genomes_project 7 22719775 22728265 + MGP_129S1SvImJ_P0082159 Smg9 protein_coding protein_coding MGP_129S1SvImJ_T0082160.1 MGP_129S1SvImJ_G0031827.1 mouse_genomes_project 7 22735591 22741807 + Smg9 protein_coding retained_intron MGP_129S1SvImJ_T0082161.1 MGP_129S1SvImJ_G0031827.1 mouse_genomes_project 7 22735833 22741807 + MGP_129S1SvImJ_P0082161 Smg9 protein_coding protein_coding MGP_129S1SvImJ_T0082162.1 MGP_129S1SvImJ_G0031827.1 mouse_genomes_project 7 22741077 22743515 + Smg9 protein_coding retained_intron MGP_129S1SvImJ_T0002240.1 MGP_129S1SvImJ_G0002152.1 mouse_genomes_project 7 39166749 39169120 - TEC TEC MGP_129S1SvImJ_T0081411.1 MGP_129S1SvImJ_G0031558.1 mouse_genomes_project 7 1680791 1682023 - MGP_129S1SvImJ_P0081411 Cox6b2 protein_coding protein_coding MGP_129S1SvImJ_T0081412.1 MGP_129S1SvImJ_G0031558.1 mouse_genomes_project 7 1680791 1682023 - MGP_129S1SvImJ_P0081412 Cox6b2 protein_coding protein_coding MGP_129S1SvImJ_T0081413.1 MGP_129S1SvImJ_G0031558.1 mouse_genomes_project 7 1680791 1682094 - MGP_129S1SvImJ_P0081413 Cox6b2 protein_coding protein_coding MGP_129S1SvImJ_T0081414.1 MGP_129S1SvImJ_G0031558.1 mouse_genomes_project 7 1680791 1681972 - MGP_129S1SvImJ_P0081414 Cox6b2 protein_coding protein_coding MGP_129S1SvImJ_T0081415.1 MGP_129S1SvImJ_G0031558.1 mouse_genomes_project 7 1680793 1682009 - MGP_129S1SvImJ_P0081415 Cox6b2 protein_coding protein_coding MGP_129S1SvImJ_T0081416.1 MGP_129S1SvImJ_G0031558.1 mouse_genomes_project 7 1680794 1682023 - MGP_129S1SvImJ_P0081416 Cox6b2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081417.1 MGP_129S1SvImJ_G0031558.1 mouse_genomes_project 7 1680854 1682038 - MGP_129S1SvImJ_P0081417 Cox6b2 protein_coding protein_coding MGP_129S1SvImJ_T0081418.1 MGP_129S1SvImJ_G0031558.1 mouse_genomes_project 7 1680924 1681528 - Cox6b2 protein_coding retained_intron MGP_129S1SvImJ_T0081419.1 MGP_129S1SvImJ_G0031558.1 mouse_genomes_project 7 1680946 1682002 - MGP_129S1SvImJ_P0081419 Cox6b2 protein_coding protein_coding MGP_129S1SvImJ_T0015843.1 MGP_129S1SvImJ_G0013932.1 mouse_genomes_project 7 75259608 75261910 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084164.1 MGP_129S1SvImJ_G0032318.1 mouse_genomes_project 7 57521047 58204710 - MGP_129S1SvImJ_P0084164 Gabrg3 protein_coding protein_coding MGP_129S1SvImJ_T0084165.1 MGP_129S1SvImJ_G0032318.1 mouse_genomes_project 7 57987712 58204393 - MGP_129S1SvImJ_P0084165 Gabrg3 protein_coding protein_coding MGP_129S1SvImJ_T0084166.1 MGP_129S1SvImJ_G0032318.1 mouse_genomes_project 7 58146207 58204710 - Gabrg3 protein_coding retained_intron MGP_129S1SvImJ_T0086887.1 MGP_129S1SvImJ_G0033057.1 mouse_genomes_project 7 132199009 132228291 + Stx4a protein_coding processed_transcript MGP_129S1SvImJ_T0086888.1 MGP_129S1SvImJ_G0033057.1 mouse_genomes_project 7 132221780 132228291 + MGP_129S1SvImJ_P0086888 Stx4a protein_coding protein_coding MGP_129S1SvImJ_T0086889.1 MGP_129S1SvImJ_G0033057.1 mouse_genomes_project 7 132221984 132228272 + MGP_129S1SvImJ_P0086889 Stx4a protein_coding protein_coding MGP_129S1SvImJ_T0086890.1 MGP_129S1SvImJ_G0033057.1 mouse_genomes_project 7 132221986 132223961 + Stx4a protein_coding retained_intron MGP_129S1SvImJ_T0086891.1 MGP_129S1SvImJ_G0033057.1 mouse_genomes_project 7 132221994 132226635 + MGP_129S1SvImJ_P0086891 Stx4a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086892.1 MGP_129S1SvImJ_G0033057.1 mouse_genomes_project 7 132222701 132226603 + Stx4a protein_coding retained_intron MGP_129S1SvImJ_T0086893.1 MGP_129S1SvImJ_G0033057.1 mouse_genomes_project 7 132223614 132227951 + Stx4a protein_coding retained_intron MGP_129S1SvImJ_T0086894.1 MGP_129S1SvImJ_G0033057.1 mouse_genomes_project 7 132225800 132227772 + Stx4a protein_coding retained_intron MGP_129S1SvImJ_T0086895.1 MGP_129S1SvImJ_G0033057.1 mouse_genomes_project 7 132227664 132228291 + Stx4a protein_coding retained_intron MGP_129S1SvImJ_T0084870.1 MGP_129S1SvImJ_G0032473.1 mouse_genomes_project 7 88593691 88594703 - MGP_129S1SvImJ_P0084870 Olfr307 protein_coding protein_coding MGP_129S1SvImJ_T0085566.1 MGP_129S1SvImJ_G0032714.1 mouse_genomes_project 7 107506670 107523532 - protein_coding retained_intron MGP_129S1SvImJ_T0085567.1 MGP_129S1SvImJ_G0032714.1 mouse_genomes_project 7 107506686 107509764 - MGP_129S1SvImJ_P0085567 protein_coding protein_coding MGP_129S1SvImJ_T0085568.1 MGP_129S1SvImJ_G0032714.1 mouse_genomes_project 7 107507961 107519900 - MGP_129S1SvImJ_P0085568 protein_coding protein_coding MGP_129S1SvImJ_T0085569.1 MGP_129S1SvImJ_G0032714.1 mouse_genomes_project 7 107508667 107509761 - protein_coding retained_intron MGP_129S1SvImJ_T0085570.1 MGP_129S1SvImJ_G0032714.1 mouse_genomes_project 7 107512511 107523430 - MGP_129S1SvImJ_P0085570 protein_coding protein_coding MGP_129S1SvImJ_T0102693.1 MGP_129S1SvImJ_G0040526.1 mouse_genomes_project 7 10641978 10642179 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0084102.1 MGP_129S1SvImJ_G0032309.1 mouse_genomes_project 7 52779269 52783313 - MGP_129S1SvImJ_P0084102 1700015G11Rik protein_coding protein_coding MGP_129S1SvImJ_T0084103.1 MGP_129S1SvImJ_G0032309.1 mouse_genomes_project 7 52779271 52783288 - MGP_129S1SvImJ_P0084103 1700015G11Rik protein_coding protein_coding MGP_129S1SvImJ_T0084104.1 MGP_129S1SvImJ_G0032309.1 mouse_genomes_project 7 52779273 52783280 - MGP_129S1SvImJ_P0084104 1700015G11Rik protein_coding protein_coding MGP_129S1SvImJ_T0084105.1 MGP_129S1SvImJ_G0032309.1 mouse_genomes_project 7 52779276 52783267 - MGP_129S1SvImJ_P0084105 1700015G11Rik protein_coding protein_coding MGP_129S1SvImJ_T0015738.1 MGP_129S1SvImJ_G0013827.1 mouse_genomes_project 7 15454404 15454871 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084003.1 MGP_129S1SvImJ_G0032273.1 mouse_genomes_project 7 47193902 47224331 + MGP_129S1SvImJ_P0084003 Gtf2h1 protein_coding protein_coding MGP_129S1SvImJ_T0084004.1 MGP_129S1SvImJ_G0032273.1 mouse_genomes_project 7 47193913 47203941 + MGP_129S1SvImJ_P0084004 Gtf2h1 protein_coding protein_coding MGP_129S1SvImJ_T0084005.1 MGP_129S1SvImJ_G0032273.1 mouse_genomes_project 7 47194470 47223806 + MGP_129S1SvImJ_P0084005 Gtf2h1 protein_coding protein_coding MGP_129S1SvImJ_T0084006.1 MGP_129S1SvImJ_G0032273.1 mouse_genomes_project 7 47199600 47223440 + MGP_129S1SvImJ_P0084006 Gtf2h1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084007.1 MGP_129S1SvImJ_G0032273.1 mouse_genomes_project 7 47207365 47215617 + Gtf2h1 protein_coding retained_intron MGP_129S1SvImJ_T0083311.1 MGP_129S1SvImJ_G0032092.1 mouse_genomes_project 7 34970586 34977176 - MGP_129S1SvImJ_P0083311 Rgs9bp protein_coding protein_coding MGP_129S1SvImJ_T0085003.1 MGP_129S1SvImJ_G0032519.1 mouse_genomes_project 7 99773832 99988836 + MGP_129S1SvImJ_P0085003 Gab2 protein_coding protein_coding MGP_129S1SvImJ_T0085004.1 MGP_129S1SvImJ_G0032519.1 mouse_genomes_project 7 99774030 99984926 + MGP_129S1SvImJ_P0085004 Gab2 protein_coding protein_coding MGP_129S1SvImJ_T0085743.1 MGP_129S1SvImJ_G0032793.1 mouse_genomes_project 7 110504402 110540215 + MGP_129S1SvImJ_P0085743 Nlrp14 protein_coding protein_coding MGP_129S1SvImJ_T0085744.1 MGP_129S1SvImJ_G0032793.1 mouse_genomes_project 7 110527372 110540224 + MGP_129S1SvImJ_P0085744 Nlrp14 protein_coding protein_coding MGP_129S1SvImJ_T0081170.1 MGP_129S1SvImJ_G0031515.1 mouse_genomes_project 7 186954 196907 + MGP_129S1SvImJ_P0081170 Myadm protein_coding protein_coding MGP_129S1SvImJ_T0081172.1 MGP_129S1SvImJ_G0031515.1 mouse_genomes_project 7 188411 197973 + MGP_129S1SvImJ_P0081172 Myadm protein_coding protein_coding MGP_129S1SvImJ_T0081173.1 MGP_129S1SvImJ_G0031515.1 mouse_genomes_project 7 188452 199064 + MGP_129S1SvImJ_P0081173 Myadm protein_coding protein_coding MGP_129S1SvImJ_T0081174.1 MGP_129S1SvImJ_G0031515.1 mouse_genomes_project 7 189356 195621 + MGP_129S1SvImJ_P0081174 Myadm protein_coding protein_coding MGP_129S1SvImJ_T0081175.1 MGP_129S1SvImJ_G0031515.1 mouse_genomes_project 7 191550 197946 + MGP_129S1SvImJ_P0081175 Myadm protein_coding protein_coding MGP_129S1SvImJ_T0081483.1 MGP_129S1SvImJ_G0031588.1 mouse_genomes_project 7 2188650 2190133 - MGP_129S1SvImJ_P0081483 protein_coding protein_coding MGP_129S1SvImJ_T0015708.1 MGP_129S1SvImJ_G0013797.1 mouse_genomes_project 7 2454272 2454615 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081949.1 MGP_129S1SvImJ_G0031764.1 mouse_genomes_project 7 17139219 17173115 + MGP_129S1SvImJ_P0081949 Eml2 protein_coding protein_coding MGP_129S1SvImJ_T0081950.1 MGP_129S1SvImJ_G0031764.1 mouse_genomes_project 7 17146632 17173341 + MGP_129S1SvImJ_P0081950 Eml2 protein_coding protein_coding MGP_129S1SvImJ_T0081951.1 MGP_129S1SvImJ_G0031764.1 mouse_genomes_project 7 17146643 17173337 + MGP_129S1SvImJ_P0081951 Eml2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081952.1 MGP_129S1SvImJ_G0031764.1 mouse_genomes_project 7 17146666 17173338 + MGP_129S1SvImJ_P0081952 Eml2 protein_coding protein_coding MGP_129S1SvImJ_T0081953.1 MGP_129S1SvImJ_G0031764.1 mouse_genomes_project 7 17146678 17150564 + MGP_129S1SvImJ_P0081953 Eml2 protein_coding protein_coding MGP_129S1SvImJ_T0081954.1 MGP_129S1SvImJ_G0031764.1 mouse_genomes_project 7 17146699 17152002 + MGP_129S1SvImJ_P0081954 Eml2 protein_coding protein_coding MGP_129S1SvImJ_T0081955.1 MGP_129S1SvImJ_G0031764.1 mouse_genomes_project 7 17146793 17150567 + Eml2 protein_coding processed_transcript MGP_129S1SvImJ_T0081956.1 MGP_129S1SvImJ_G0031764.1 mouse_genomes_project 7 17147067 17152015 + Eml2 protein_coding retained_intron MGP_129S1SvImJ_T0015936.1 MGP_129S1SvImJ_G0014025.1 mouse_genomes_project 7 139470201 139471524 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102727.1 MGP_129S1SvImJ_G0040559.1 mouse_genomes_project 7 33058621 33060384 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0081837.1 MGP_129S1SvImJ_G0031723.1 mouse_genomes_project 7 14682451 14692110 - MGP_129S1SvImJ_P0081837 Calm3 protein_coding protein_coding MGP_129S1SvImJ_T0081838.1 MGP_129S1SvImJ_G0031723.1 mouse_genomes_project 7 14682473 14684234 - MGP_129S1SvImJ_P0081838 Calm3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081839.1 MGP_129S1SvImJ_G0031723.1 mouse_genomes_project 7 14683007 14684272 - MGP_129S1SvImJ_P0081839 Calm3 protein_coding protein_coding MGP_129S1SvImJ_T0081840.1 MGP_129S1SvImJ_G0031723.1 mouse_genomes_project 7 14684212 14691825 - Calm3 protein_coding processed_transcript MGP_129S1SvImJ_T0085694.1 MGP_129S1SvImJ_G0032763.1 mouse_genomes_project 7 109008668 109013637 - MGP_129S1SvImJ_P0085694 Taf10 protein_coding protein_coding MGP_129S1SvImJ_T0085702.1 MGP_129S1SvImJ_G0032763.1 mouse_genomes_project 7 109012171 109013358 - Taf10 protein_coding retained_intron MGP_129S1SvImJ_T0085703.1 MGP_129S1SvImJ_G0032763.1 mouse_genomes_project 7 109012181 109012886 - Taf10 protein_coding retained_intron MGP_129S1SvImJ_T0085704.1 MGP_129S1SvImJ_G0032763.1 mouse_genomes_project 7 109012512 109013618 - Taf10 protein_coding retained_intron MGP_129S1SvImJ_T0008895.1 MGP_129S1SvImJ_G0007185.1 mouse_genomes_project 7 66996657 66999852 + 1810008I18Rik lincRNA lincRNA MGP_129S1SvImJ_T0008896.1 MGP_129S1SvImJ_G0007185.1 mouse_genomes_project 7 66997577 67000015 + 1810008I18Rik lincRNA lincRNA MGP_129S1SvImJ_T0083185.1 MGP_129S1SvImJ_G0032067.1 mouse_genomes_project 7 32938060 32939244 + MGP_129S1SvImJ_P0083185 Scgb1b24 protein_coding protein_coding MGP_129S1SvImJ_T0087716.1 MGP_129S1SvImJ_G0033256.1 mouse_genomes_project 7 147696586 147699189 + MGP_129S1SvImJ_P0087716 Tnni2 protein_coding protein_coding MGP_129S1SvImJ_T0087717.1 MGP_129S1SvImJ_G0033256.1 mouse_genomes_project 7 147696594 147698815 + MGP_129S1SvImJ_P0087717 Tnni2 protein_coding protein_coding MGP_129S1SvImJ_T0087718.1 MGP_129S1SvImJ_G0033256.1 mouse_genomes_project 7 147697108 147699147 + MGP_129S1SvImJ_P0087718 Tnni2 protein_coding protein_coding MGP_129S1SvImJ_T0087719.1 MGP_129S1SvImJ_G0033256.1 mouse_genomes_project 7 147697686 147699187 + Tnni2 protein_coding retained_intron MGP_129S1SvImJ_T0087720.1 MGP_129S1SvImJ_G0033256.1 mouse_genomes_project 7 147697758 147698638 + Tnni2 protein_coding retained_intron MGP_129S1SvImJ_T0087721.1 MGP_129S1SvImJ_G0033256.1 mouse_genomes_project 7 147697949 147699184 + MGP_129S1SvImJ_P0087721 Tnni2 protein_coding protein_coding MGP_129S1SvImJ_T0005157.1 MGP_129S1SvImJ_G0004402.1 mouse_genomes_project 7 594711 599520 + Gm15929 antisense antisense MGP_129S1SvImJ_T0087263.1 MGP_129S1SvImJ_G0033136.1 mouse_genomes_project 7 140553478 140581596 - MGP_129S1SvImJ_P0087263 Mki67 protein_coding protein_coding MGP_129S1SvImJ_T0085479.1 MGP_129S1SvImJ_G0032649.1 mouse_genomes_project 7 106340348 106343253 - MGP_129S1SvImJ_P0085479 protein_coding protein_coding MGP_129S1SvImJ_T0081472.1 MGP_129S1SvImJ_G0031584.1 mouse_genomes_project 7 2052909 2072806 + MGP_129S1SvImJ_P0081472 Epn1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0081473.1 MGP_129S1SvImJ_G0031584.1 mouse_genomes_project 7 2053396 2072798 + MGP_129S1SvImJ_P0081473 Epn1 protein_coding protein_coding MGP_129S1SvImJ_T0081474.1 MGP_129S1SvImJ_G0031584.1 mouse_genomes_project 7 2053401 2063079 + MGP_129S1SvImJ_P0081474 Epn1 protein_coding protein_coding MGP_129S1SvImJ_T0081475.1 MGP_129S1SvImJ_G0031584.1 mouse_genomes_project 7 2053429 2057005 + MGP_129S1SvImJ_P0081475 Epn1 protein_coding protein_coding MGP_129S1SvImJ_T0081476.1 MGP_129S1SvImJ_G0031584.1 mouse_genomes_project 7 2053454 2072796 + MGP_129S1SvImJ_P0081476 Epn1 protein_coding protein_coding MGP_129S1SvImJ_T0081477.1 MGP_129S1SvImJ_G0031584.1 mouse_genomes_project 7 2056753 2068304 + Epn1 protein_coding processed_transcript MGP_129S1SvImJ_T0081478.1 MGP_129S1SvImJ_G0031584.1 mouse_genomes_project 7 2062955 2066082 + Epn1 protein_coding retained_intron MGP_129S1SvImJ_T0100039.1 MGP_129S1SvImJ_G0038106.1 mouse_genomes_project 7 1666301 1666403 + Gm24537 snRNA snRNA MGP_129S1SvImJ_T0010892.1 MGP_129S1SvImJ_G0009008.1 mouse_genomes_project 7 48251419 48251529 + Gm22427 miRNA miRNA MGP_129S1SvImJ_T0100052.1 MGP_129S1SvImJ_G0038119.1 mouse_genomes_project 7 40529718 40529799 + Gm25784 snRNA snRNA MGP_129S1SvImJ_T0015801.1 MGP_129S1SvImJ_G0013890.1 mouse_genomes_project 7 43063171 43063707 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082132.1 MGP_129S1SvImJ_G0031821.1 mouse_genomes_project 7 22564451 22577051 + MGP_129S1SvImJ_P0082132 Zfp93 protein_coding protein_coding MGP_129S1SvImJ_T0002235.1 MGP_129S1SvImJ_G0002147.1 mouse_genomes_project 7 36209037 36210579 + TEC TEC MGP_129S1SvImJ_T0083622.1 MGP_129S1SvImJ_G0032170.1 mouse_genomes_project 7 44751377 44761698 + Napsa protein_coding retained_intron MGP_129S1SvImJ_T0083623.1 MGP_129S1SvImJ_G0032170.1 mouse_genomes_project 7 44751377 44765364 + MGP_129S1SvImJ_P0083623 Napsa protein_coding protein_coding MGP_129S1SvImJ_T0087086.1 MGP_129S1SvImJ_G0033091.1 mouse_genomes_project 7 134910668 135042159 - MGP_129S1SvImJ_P0087086 Ate1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0087087.1 MGP_129S1SvImJ_G0033091.1 mouse_genomes_project 7 134910708 135042228 - MGP_129S1SvImJ_P0087087 Ate1 protein_coding protein_coding MGP_129S1SvImJ_T0087088.1 MGP_129S1SvImJ_G0033091.1 mouse_genomes_project 7 134910708 135042237 - MGP_129S1SvImJ_P0087088 Ate1 protein_coding protein_coding MGP_129S1SvImJ_T0087089.1 MGP_129S1SvImJ_G0033091.1 mouse_genomes_project 7 134913740 135042659 - MGP_129S1SvImJ_P0087089 Ate1 protein_coding protein_coding MGP_129S1SvImJ_T0087090.1 MGP_129S1SvImJ_G0033091.1 mouse_genomes_project 7 134913740 135042659 - MGP_129S1SvImJ_P0087090 Ate1 protein_coding protein_coding MGP_129S1SvImJ_T0082920.1 MGP_129S1SvImJ_G0032016.1 mouse_genomes_project 7 29342979 29350234 - MGP_129S1SvImJ_P0082920 Lrfn3 protein_coding protein_coding MGP_129S1SvImJ_T0083262.1 MGP_129S1SvImJ_G0032082.1 mouse_genomes_project 7 34473949 34476582 + MGP_129S1SvImJ_P0083262 Cebpa protein_coding protein_coding MGP_129S1SvImJ_T0083263.1 MGP_129S1SvImJ_G0032082.1 mouse_genomes_project 7 34473959 34476582 + MGP_129S1SvImJ_P0083263 Cebpa protein_coding protein_coding MGP_129S1SvImJ_T0005314.1 MGP_129S1SvImJ_G0004509.1 mouse_genomes_project 7 131952648 131958133 - Gm44759 antisense antisense MGP_129S1SvImJ_T0010873.1 MGP_129S1SvImJ_G0008989.1 mouse_genomes_project 7 27942894 27942960 + Gm44408 miRNA miRNA MGP_129S1SvImJ_T0086908.1 MGP_129S1SvImJ_G0033061.1 mouse_genomes_project 7 132269428 132280035 - MGP_129S1SvImJ_P0086908 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086752.1 MGP_129S1SvImJ_G0033030.1 mouse_genomes_project 7 131613336 131615514 - MGP_129S1SvImJ_P0086752 protein_coding protein_coding MGP_129S1SvImJ_T0002346.1 MGP_129S1SvImJ_G0002257.1 mouse_genomes_project 7 148637361 148640853 - TEC TEC MGP_129S1SvImJ_T0015781.1 MGP_129S1SvImJ_G0013870.1 mouse_genomes_project 7 35667232 35668207 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102743.1 MGP_129S1SvImJ_G0040575.1 mouse_genomes_project 7 44032246 44033862 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0018410.1 MGP_129S1SvImJ_G0015673.1 mouse_genomes_project 7 65011490 65014652 + Gm27252 processed_transcript lincRNA MGP_129S1SvImJ_T0018411.1 MGP_129S1SvImJ_G0015673.1 mouse_genomes_project 7 65012931 65014483 + Gm27252 processed_transcript antisense MGP_129S1SvImJ_T0011699.1 MGP_129S1SvImJ_G0009815.1 mouse_genomes_project 7 10768098 10768366 + Gm23499 misc_RNA misc_RNA MGP_129S1SvImJ_T0087762.1 MGP_129S1SvImJ_G0033260.1 mouse_genomes_project 7 147792916 147800611 + Mrpl23 protein_coding processed_transcript MGP_129S1SvImJ_T0087763.1 MGP_129S1SvImJ_G0033260.1 mouse_genomes_project 7 147793129 147800621 + MGP_129S1SvImJ_P0087763 Mrpl23 protein_coding protein_coding MGP_129S1SvImJ_T0087764.1 MGP_129S1SvImJ_G0033260.1 mouse_genomes_project 7 147794639 147797163 + Mrpl23 protein_coding retained_intron MGP_129S1SvImJ_T0087765.1 MGP_129S1SvImJ_G0033260.1 mouse_genomes_project 7 147796221 147797784 + Mrpl23 protein_coding retained_intron MGP_129S1SvImJ_T0083191.1 MGP_129S1SvImJ_G0032070.1 mouse_genomes_project 7 33330929 33332885 - MGP_129S1SvImJ_P0083191 Scgb2b27 protein_coding protein_coding MGP_129S1SvImJ_T0083192.1 MGP_129S1SvImJ_G0032070.1 mouse_genomes_project 7 33330940 33332951 - Scgb2b27 protein_coding retained_intron MGP_129S1SvImJ_T0083193.1 MGP_129S1SvImJ_G0032070.1 mouse_genomes_project 7 33330978 33332876 - MGP_129S1SvImJ_P0083193 Scgb2b27 protein_coding protein_coding MGP_129S1SvImJ_T0008898.1 MGP_129S1SvImJ_G0007187.1 mouse_genomes_project 7 68453009 68471370 - 1700112J16Rik lincRNA lincRNA MGP_129S1SvImJ_T0082585.1 MGP_129S1SvImJ_G0031933.1 mouse_genomes_project 7 26948549 26956375 + MGP_129S1SvImJ_P0082585 Dyrk1b protein_coding protein_coding MGP_129S1SvImJ_T0082586.1 MGP_129S1SvImJ_G0031933.1 mouse_genomes_project 7 26948574 26956004 + MGP_129S1SvImJ_P0082586 Dyrk1b protein_coding protein_coding MGP_129S1SvImJ_T0082587.1 MGP_129S1SvImJ_G0031933.1 mouse_genomes_project 7 26949346 26956375 + MGP_129S1SvImJ_P0082587 Dyrk1b protein_coding protein_coding MGP_129S1SvImJ_T0082588.1 MGP_129S1SvImJ_G0031933.1 mouse_genomes_project 7 26949396 26956024 + MGP_129S1SvImJ_P0082588 Dyrk1b protein_coding protein_coding MGP_129S1SvImJ_T0084174.1 MGP_129S1SvImJ_G0032321.1 mouse_genomes_project 7 59485673 59664160 + MGP_129S1SvImJ_P0084174 Atp10a protein_coding protein_coding MGP_129S1SvImJ_T0102796.1 MGP_129S1SvImJ_G0040628.1 mouse_genomes_project 7 88835120 88836046 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0101333.1 MGP_129S1SvImJ_G0039400.1 mouse_genomes_project 7 100225851 100225960 + Gm24412 snoRNA snoRNA MGP_129S1SvImJ_T0081757.1 MGP_129S1SvImJ_G0031703.1 mouse_genomes_project 7 13899441 13909849 - MGP_129S1SvImJ_P0081757 C5ar2 protein_coding protein_coding MGP_129S1SvImJ_T0081758.1 MGP_129S1SvImJ_G0031703.1 mouse_genomes_project 7 13899441 13913661 - MGP_129S1SvImJ_P0081758 C5ar2 protein_coding protein_coding MGP_129S1SvImJ_T0100062.1 MGP_129S1SvImJ_G0038129.1 mouse_genomes_project 7 67339516 67339617 - Gm23042 snRNA snRNA MGP_129S1SvImJ_T0002342.1 MGP_129S1SvImJ_G0002253.1 mouse_genomes_project 7 148405320 148405555 + TEC TEC MGP_129S1SvImJ_T0086306.1 MGP_129S1SvImJ_G0032956.1 mouse_genomes_project 7 126373424 126733712 + MGP_129S1SvImJ_P0086306 Prkcb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086307.1 MGP_129S1SvImJ_G0032956.1 mouse_genomes_project 7 126373970 126727992 + MGP_129S1SvImJ_P0086307 Prkcb protein_coding protein_coding MGP_129S1SvImJ_T0086308.1 MGP_129S1SvImJ_G0032956.1 mouse_genomes_project 7 126373982 126733715 + MGP_129S1SvImJ_P0086308 Prkcb protein_coding protein_coding MGP_129S1SvImJ_T0086309.1 MGP_129S1SvImJ_G0032956.1 mouse_genomes_project 7 126374701 126518880 + Prkcb protein_coding processed_transcript MGP_129S1SvImJ_T0086310.1 MGP_129S1SvImJ_G0032956.1 mouse_genomes_project 7 126508548 126552637 + Prkcb protein_coding processed_transcript MGP_129S1SvImJ_T0086311.1 MGP_129S1SvImJ_G0032956.1 mouse_genomes_project 7 126691954 126694733 + Prkcb protein_coding retained_intron MGP_129S1SvImJ_T0086312.1 MGP_129S1SvImJ_G0032956.1 mouse_genomes_project 7 126697981 126727415 + Prkcb protein_coding processed_transcript MGP_129S1SvImJ_T0086313.1 MGP_129S1SvImJ_G0032956.1 mouse_genomes_project 7 126732764 126733715 + Prkcb protein_coding retained_intron MGP_129S1SvImJ_T0087655.1 MGP_129S1SvImJ_G0033239.1 mouse_genomes_project 7 146837730 146863701 - MGP_129S1SvImJ_P0087655 protein_coding protein_coding MGP_129S1SvImJ_T0087831.1 MGP_129S1SvImJ_G0033273.1 mouse_genomes_project 7 148758522 148798296 + MGP_129S1SvImJ_P0087831 Slc22a18 protein_coding protein_coding MGP_129S1SvImJ_T0087832.1 MGP_129S1SvImJ_G0033273.1 mouse_genomes_project 7 148770803 148773445 + Slc22a18 protein_coding processed_transcript MGP_129S1SvImJ_T0087833.1 MGP_129S1SvImJ_G0033273.1 mouse_genomes_project 7 148770850 148796015 + MGP_129S1SvImJ_P0087833 Slc22a18 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087834.1 MGP_129S1SvImJ_G0033273.1 mouse_genomes_project 7 148770862 148798298 + MGP_129S1SvImJ_P0087834 Slc22a18 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087835.1 MGP_129S1SvImJ_G0033273.1 mouse_genomes_project 7 148770887 148796016 + MGP_129S1SvImJ_P0087835 Slc22a18 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085745.1 MGP_129S1SvImJ_G0032794.1 mouse_genomes_project 7 110551515 110555768 + MGP_129S1SvImJ_P0085745 Rbmxl2 protein_coding protein_coding MGP_129S1SvImJ_T0008979.1 MGP_129S1SvImJ_G0007240.1 mouse_genomes_project 7 101113405 101143649 - Gm44507 lincRNA lincRNA MGP_129S1SvImJ_T0002319.1 MGP_129S1SvImJ_G0002230.1 mouse_genomes_project 7 126399470 126404909 + TEC TEC MGP_129S1SvImJ_T0085514.1 MGP_129S1SvImJ_G0032683.1 mouse_genomes_project 7 107036976 107038523 - MGP_129S1SvImJ_P0085514 protein_coding protein_coding MGP_129S1SvImJ_T0085515.1 MGP_129S1SvImJ_G0032683.1 mouse_genomes_project 7 107036977 107038179 - protein_coding retained_intron MGP_129S1SvImJ_T0085516.1 MGP_129S1SvImJ_G0032683.1 mouse_genomes_project 7 107037893 107038541 - MGP_129S1SvImJ_P0085516 protein_coding protein_coding MGP_129S1SvImJ_T0102751.1 MGP_129S1SvImJ_G0040583.1 mouse_genomes_project 7 47943784 48071214 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0082143.1 MGP_129S1SvImJ_G0031823.1 mouse_genomes_project 7 22614052 22630537 - MGP_129S1SvImJ_P0082143 Zfp94 protein_coding protein_coding MGP_129S1SvImJ_T0082144.1 MGP_129S1SvImJ_G0031823.1 mouse_genomes_project 7 22614145 22630598 - MGP_129S1SvImJ_P0082144 Zfp94 protein_coding protein_coding MGP_129S1SvImJ_T0082145.1 MGP_129S1SvImJ_G0031823.1 mouse_genomes_project 7 22615975 22623339 - Zfp94 protein_coding retained_intron MGP_129S1SvImJ_T0082146.1 MGP_129S1SvImJ_G0031823.1 mouse_genomes_project 7 22622518 22630556 - Zfp94 protein_coding processed_transcript MGP_129S1SvImJ_T0082147.1 MGP_129S1SvImJ_G0031823.1 mouse_genomes_project 7 22622811 22630540 - Zfp94 protein_coding retained_intron MGP_129S1SvImJ_T0082148.1 MGP_129S1SvImJ_G0031823.1 mouse_genomes_project 7 22622926 22630514 - Zfp94 protein_coding processed_transcript MGP_129S1SvImJ_T0015826.1 MGP_129S1SvImJ_G0013915.1 mouse_genomes_project 7 57842794 57844194 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081717.1 MGP_129S1SvImJ_G0031693.1 mouse_genomes_project 7 13560385 13565420 - MGP_129S1SvImJ_P0081717 protein_coding protein_coding MGP_129S1SvImJ_T0015800.1 MGP_129S1SvImJ_G0013889.1 mouse_genomes_project 7 43037942 43038290 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010862.1 MGP_129S1SvImJ_G0008978.1 mouse_genomes_project 7 21559621 21559726 + Gm25196 miRNA miRNA MGP_129S1SvImJ_T0010905.1 MGP_129S1SvImJ_G0009021.1 mouse_genomes_project 7 62775355 62775421 - Mir344e miRNA miRNA MGP_129S1SvImJ_T0087147.1 MGP_129S1SvImJ_G0033107.1 mouse_genomes_project 7 136185085 136195786 + MGP_129S1SvImJ_P0087147 Hmx2 protein_coding protein_coding MGP_129S1SvImJ_T0087148.1 MGP_129S1SvImJ_G0033107.1 mouse_genomes_project 7 136191637 136195786 + MGP_129S1SvImJ_P0087148 Hmx2 protein_coding protein_coding MGP_129S1SvImJ_T0086678.1 MGP_129S1SvImJ_G0033015.1 mouse_genomes_project 7 131329242 131331544 - MGP_129S1SvImJ_P0086678 Pagr1a protein_coding protein_coding MGP_129S1SvImJ_T0086679.1 MGP_129S1SvImJ_G0033015.1 mouse_genomes_project 7 131329256 131334519 - Pagr1a protein_coding retained_intron MGP_129S1SvImJ_T0086683.1 MGP_129S1SvImJ_G0033015.1 mouse_genomes_project 7 131330422 131335289 - Pagr1a protein_coding processed_transcript MGP_129S1SvImJ_T0086684.1 MGP_129S1SvImJ_G0033015.1 mouse_genomes_project 7 131330425 131335231 - MGP_129S1SvImJ_P0086684 Pagr1a protein_coding protein_coding MGP_129S1SvImJ_T0086685.1 MGP_129S1SvImJ_G0033015.1 mouse_genomes_project 7 131330962 131335281 - Pagr1a protein_coding processed_transcript MGP_129S1SvImJ_T0005259.1 MGP_129S1SvImJ_G0004471.1 mouse_genomes_project 7 82031500 82032960 - Gm44949 antisense antisense MGP_129S1SvImJ_T0015895.1 MGP_129S1SvImJ_G0013984.1 mouse_genomes_project 7 107955398 107956451 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081606.1 MGP_129S1SvImJ_G0031656.1 mouse_genomes_project 7 10320272 10324669 + MGP_129S1SvImJ_P0081606 Rps5 protein_coding protein_coding MGP_129S1SvImJ_T0081607.1 MGP_129S1SvImJ_G0031656.1 mouse_genomes_project 7 10320272 10324668 + MGP_129S1SvImJ_P0081607 Rps5 protein_coding protein_coding MGP_129S1SvImJ_T0081608.1 MGP_129S1SvImJ_G0031656.1 mouse_genomes_project 7 10320300 10324477 + MGP_129S1SvImJ_P0081608 Rps5 protein_coding protein_coding MGP_129S1SvImJ_T0081609.1 MGP_129S1SvImJ_G0031656.1 mouse_genomes_project 7 10320313 10324202 + Rps5 protein_coding retained_intron MGP_129S1SvImJ_T0081610.1 MGP_129S1SvImJ_G0031656.1 mouse_genomes_project 7 10320318 10321347 + Rps5 protein_coding retained_intron MGP_129S1SvImJ_T0081611.1 MGP_129S1SvImJ_G0031656.1 mouse_genomes_project 7 10320419 10324477 + MGP_129S1SvImJ_P0081611 Rps5 protein_coding protein_coding MGP_129S1SvImJ_T0081612.1 MGP_129S1SvImJ_G0031656.1 mouse_genomes_project 7 10324019 10324667 + Rps5 protein_coding retained_intron MGP_129S1SvImJ_T0087159.1 MGP_129S1SvImJ_G0033113.1 mouse_genomes_project 7 137294770 137299530 - MGP_129S1SvImJ_P0087159 Nkx1-2 protein_coding protein_coding MGP_129S1SvImJ_T0087400.1 MGP_129S1SvImJ_G0033175.1 mouse_genomes_project 7 145444994 145445930 - MGP_129S1SvImJ_P0087400 Olfr60 protein_coding protein_coding MGP_129S1SvImJ_T0005338.1 MGP_129S1SvImJ_G0004527.1 mouse_genomes_project 7 148905301 148906468 + Gm15579 antisense antisense MGP_129S1SvImJ_T0084834.1 MGP_129S1SvImJ_G0032452.1 mouse_genomes_project 7 85924086 85925042 + MGP_129S1SvImJ_P0084834 protein_coding protein_coding MGP_129S1SvImJ_T0086853.1 MGP_129S1SvImJ_G0033050.1 mouse_genomes_project 7 132088738 132110174 - MGP_129S1SvImJ_P0086853 Ctf2 protein_coding protein_coding MGP_129S1SvImJ_T0086854.1 MGP_129S1SvImJ_G0033050.1 mouse_genomes_project 7 132088738 132096036 - MGP_129S1SvImJ_P0086854 Ctf2 protein_coding protein_coding MGP_129S1SvImJ_T0011718.1 MGP_129S1SvImJ_G0009834.1 mouse_genomes_project 7 141410447 141410755 - Gm24444 misc_RNA misc_RNA MGP_129S1SvImJ_T0081315.1 MGP_129S1SvImJ_G0031542.1 mouse_genomes_project 7 1252307 1261069 + MGP_129S1SvImJ_P0081315 Ncr1 protein_coding protein_coding MGP_129S1SvImJ_T0081316.1 MGP_129S1SvImJ_G0031542.1 mouse_genomes_project 7 1252352 1261069 + MGP_129S1SvImJ_P0081316 Ncr1 protein_coding protein_coding MGP_129S1SvImJ_T0083515.1 MGP_129S1SvImJ_G0032150.1 mouse_genomes_project 7 44026917 44031889 + MGP_129S1SvImJ_P0083515 protein_coding protein_coding MGP_129S1SvImJ_T0085454.1 MGP_129S1SvImJ_G0032626.1 mouse_genomes_project 7 105846551 105847622 + MGP_129S1SvImJ_P0085454 Olfr561 protein_coding protein_coding MGP_129S1SvImJ_T0005204.1 MGP_129S1SvImJ_G0004432.1 mouse_genomes_project 7 29572632 29573252 - antisense antisense MGP_129S1SvImJ_T0010859.1 MGP_129S1SvImJ_G0008975.1 mouse_genomes_project 7 17039973 17040038 + Mir3100 miRNA miRNA MGP_129S1SvImJ_T0081784.1 MGP_129S1SvImJ_G0031712.1 mouse_genomes_project 7 14208276 14337287 - MGP_129S1SvImJ_P0081784 Arhgap35 protein_coding protein_coding MGP_129S1SvImJ_T0081785.1 MGP_129S1SvImJ_G0031712.1 mouse_genomes_project 7 14210826 14337231 - MGP_129S1SvImJ_P0081785 Arhgap35 protein_coding protein_coding MGP_129S1SvImJ_T0082431.1 MGP_129S1SvImJ_G0031896.1 mouse_genomes_project 7 25766183 25772428 + MGP_129S1SvImJ_P0082431 Cyp2t4 protein_coding protein_coding MGP_129S1SvImJ_T0082432.1 MGP_129S1SvImJ_G0031896.1 mouse_genomes_project 7 25767629 25772532 + MGP_129S1SvImJ_P0082432 Cyp2t4 protein_coding protein_coding MGP_129S1SvImJ_T0102722.1 MGP_129S1SvImJ_G0040554.1 mouse_genomes_project 7 30322408 30322795 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085166.1 MGP_129S1SvImJ_G0032555.1 mouse_genomes_project 7 102595898 102598916 + MGP_129S1SvImJ_P0085166 Olfr521 protein_coding protein_coding MGP_129S1SvImJ_T0083187.1 MGP_129S1SvImJ_G0032069.1 mouse_genomes_project 7 33317404 33388740 - MGP_129S1SvImJ_P0083187 Wtip protein_coding protein_coding MGP_129S1SvImJ_T0083188.1 MGP_129S1SvImJ_G0032069.1 mouse_genomes_project 7 33318026 33382957 - Wtip protein_coding processed_transcript MGP_129S1SvImJ_T0083189.1 MGP_129S1SvImJ_G0032069.1 mouse_genomes_project 7 33318077 33326881 - Wtip protein_coding retained_intron MGP_129S1SvImJ_T0083190.1 MGP_129S1SvImJ_G0032069.1 mouse_genomes_project 7 33318087 33387778 - MGP_129S1SvImJ_P0083190 Wtip protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082635.1 MGP_129S1SvImJ_G0031947.1 mouse_genomes_project 7 27244174 27255371 + MGP_129S1SvImJ_P0082635 Lrfn1 protein_coding protein_coding MGP_129S1SvImJ_T0082636.1 MGP_129S1SvImJ_G0031947.1 mouse_genomes_project 7 27244264 27253645 + Lrfn1 protein_coding retained_intron MGP_129S1SvImJ_T0082637.1 MGP_129S1SvImJ_G0031947.1 mouse_genomes_project 7 27251895 27255306 + MGP_129S1SvImJ_P0082637 Lrfn1 protein_coding protein_coding MGP_129S1SvImJ_T0082638.1 MGP_129S1SvImJ_G0031947.1 mouse_genomes_project 7 27251895 27261472 + MGP_129S1SvImJ_P0082638 Lrfn1 protein_coding protein_coding MGP_129S1SvImJ_T0087465.1 MGP_129S1SvImJ_G0033202.1 mouse_genomes_project 7 146086422 146087699 - MGP_129S1SvImJ_P0087465 Ifitm5 protein_coding protein_coding MGP_129S1SvImJ_T0085738.1 MGP_129S1SvImJ_G0032788.1 mouse_genomes_project 7 110442066 110443020 + MGP_129S1SvImJ_P0085738 Olfr714 protein_coding protein_coding MGP_129S1SvImJ_T0082668.1 MGP_129S1SvImJ_G0031959.1 mouse_genomes_project 7 27595073 27605551 - MGP_129S1SvImJ_P0082668 Nfkbib protein_coding protein_coding MGP_129S1SvImJ_T0082669.1 MGP_129S1SvImJ_G0031959.1 mouse_genomes_project 7 27595855 27605425 - MGP_129S1SvImJ_P0082669 Nfkbib protein_coding protein_coding MGP_129S1SvImJ_T0082670.1 MGP_129S1SvImJ_G0031959.1 mouse_genomes_project 7 27600692 27606423 - MGP_129S1SvImJ_P0082670 Nfkbib protein_coding protein_coding MGP_129S1SvImJ_T0082228.1 MGP_129S1SvImJ_G0031848.1 mouse_genomes_project 7 23312989 23337702 + MGP_129S1SvImJ_P0082228 Arhgef1 protein_coding protein_coding MGP_129S1SvImJ_T0082229.1 MGP_129S1SvImJ_G0031848.1 mouse_genomes_project 7 23313114 23337699 + MGP_129S1SvImJ_P0082229 Arhgef1 protein_coding protein_coding MGP_129S1SvImJ_T0082230.1 MGP_129S1SvImJ_G0031848.1 mouse_genomes_project 7 23313128 23337699 + MGP_129S1SvImJ_P0082230 Arhgef1 protein_coding protein_coding MGP_129S1SvImJ_T0082231.1 MGP_129S1SvImJ_G0031848.1 mouse_genomes_project 7 23313133 23337704 + MGP_129S1SvImJ_P0082231 Arhgef1 protein_coding protein_coding MGP_129S1SvImJ_T0082232.1 MGP_129S1SvImJ_G0031848.1 mouse_genomes_project 7 23313142 23314457 + Arhgef1 protein_coding processed_transcript MGP_129S1SvImJ_T0082233.1 MGP_129S1SvImJ_G0031848.1 mouse_genomes_project 7 23313148 23317957 + MGP_129S1SvImJ_P0082233 Arhgef1 protein_coding protein_coding MGP_129S1SvImJ_T0082234.1 MGP_129S1SvImJ_G0031848.1 mouse_genomes_project 7 23313152 23320025 + Arhgef1 protein_coding retained_intron MGP_129S1SvImJ_T0082235.1 MGP_129S1SvImJ_G0031848.1 mouse_genomes_project 7 23314428 23325845 + MGP_129S1SvImJ_P0082235 Arhgef1 protein_coding protein_coding MGP_129S1SvImJ_T0082236.1 MGP_129S1SvImJ_G0031848.1 mouse_genomes_project 7 23314430 23337699 + Arhgef1 protein_coding retained_intron MGP_129S1SvImJ_T0082237.1 MGP_129S1SvImJ_G0031848.1 mouse_genomes_project 7 23314477 23324994 + MGP_129S1SvImJ_P0082237 Arhgef1 protein_coding protein_coding MGP_129S1SvImJ_T0082238.1 MGP_129S1SvImJ_G0031848.1 mouse_genomes_project 7 23314479 23337702 + MGP_129S1SvImJ_P0082238 Arhgef1 protein_coding protein_coding MGP_129S1SvImJ_T0082239.1 MGP_129S1SvImJ_G0031848.1 mouse_genomes_project 7 23314512 23334201 + MGP_129S1SvImJ_P0082239 Arhgef1 protein_coding protein_coding MGP_129S1SvImJ_T0082240.1 MGP_129S1SvImJ_G0031848.1 mouse_genomes_project 7 23317711 23324534 + MGP_129S1SvImJ_P0082240 Arhgef1 protein_coding protein_coding MGP_129S1SvImJ_T0082241.1 MGP_129S1SvImJ_G0031848.1 mouse_genomes_project 7 23325010 23328157 + Arhgef1 protein_coding retained_intron MGP_129S1SvImJ_T0082242.1 MGP_129S1SvImJ_G0031848.1 mouse_genomes_project 7 23326595 23337216 + MGP_129S1SvImJ_P0082242 Arhgef1 protein_coding protein_coding MGP_129S1SvImJ_T0082243.1 MGP_129S1SvImJ_G0031848.1 mouse_genomes_project 7 23328966 23333489 + Arhgef1 protein_coding retained_intron MGP_129S1SvImJ_T0082244.1 MGP_129S1SvImJ_G0031848.1 mouse_genomes_project 7 23334357 23335957 + Arhgef1 protein_coding retained_intron MGP_129S1SvImJ_T0082245.1 MGP_129S1SvImJ_G0031848.1 mouse_genomes_project 7 23334462 23336595 + Arhgef1 protein_coding retained_intron MGP_129S1SvImJ_T0082246.1 MGP_129S1SvImJ_G0031848.1 mouse_genomes_project 7 23334472 23337046 + Arhgef1 protein_coding processed_transcript MGP_129S1SvImJ_T0081519.1 MGP_129S1SvImJ_G0031601.1 mouse_genomes_project 7 3417477 3430801 + MGP_129S1SvImJ_P0081519 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0085788.1 MGP_129S1SvImJ_G0032831.1 mouse_genomes_project 7 112220928 112232290 - MGP_129S1SvImJ_P0085788 Olfr516 protein_coding protein_coding MGP_129S1SvImJ_T0084948.1 MGP_129S1SvImJ_G0032506.1 mouse_genomes_project 7 92850577 92852926 + MGP_129S1SvImJ_P0084948 Ccdc89 protein_coding protein_coding MGP_129S1SvImJ_T0086533.1 MGP_129S1SvImJ_G0032993.1 mouse_genomes_project 7 130982564 130983851 + Bola2 protein_coding retained_intron MGP_129S1SvImJ_T0086534.1 MGP_129S1SvImJ_G0032993.1 mouse_genomes_project 7 130982599 130984222 + MGP_129S1SvImJ_P0086534 Bola2 protein_coding protein_coding MGP_129S1SvImJ_T0086535.1 MGP_129S1SvImJ_G0032993.1 mouse_genomes_project 7 130983129 130983857 + Bola2 protein_coding processed_transcript MGP_129S1SvImJ_T0086536.1 MGP_129S1SvImJ_G0032993.1 mouse_genomes_project 7 130983136 130983861 + MGP_129S1SvImJ_P0086536 Bola2 protein_coding protein_coding MGP_129S1SvImJ_T0086537.1 MGP_129S1SvImJ_G0032993.1 mouse_genomes_project 7 130983166 130986984 + Bola2 protein_coding retained_intron MGP_129S1SvImJ_T0087838.1 MGP_129S1SvImJ_G0033276.1 mouse_genomes_project 7 148860990 148905258 - MGP_129S1SvImJ_P0087838 Cars protein_coding protein_coding MGP_129S1SvImJ_T0087839.1 MGP_129S1SvImJ_G0033276.1 mouse_genomes_project 7 148861467 148905224 - MGP_129S1SvImJ_P0087839 Cars protein_coding protein_coding MGP_129S1SvImJ_T0087840.1 MGP_129S1SvImJ_G0033276.1 mouse_genomes_project 7 148865501 148872110 - Cars protein_coding processed_transcript MGP_129S1SvImJ_T0087841.1 MGP_129S1SvImJ_G0033276.1 mouse_genomes_project 7 148868347 148872876 - Cars protein_coding retained_intron MGP_129S1SvImJ_T0087842.1 MGP_129S1SvImJ_G0033276.1 mouse_genomes_project 7 148872686 148873953 - Cars protein_coding processed_transcript MGP_129S1SvImJ_T0087843.1 MGP_129S1SvImJ_G0033276.1 mouse_genomes_project 7 148873801 148878367 - Cars protein_coding retained_intron MGP_129S1SvImJ_T0087844.1 MGP_129S1SvImJ_G0033276.1 mouse_genomes_project 7 148890858 148901920 - Cars protein_coding processed_transcript MGP_129S1SvImJ_T0087845.1 MGP_129S1SvImJ_G0033276.1 mouse_genomes_project 7 148892259 148904849 - Cars protein_coding processed_transcript MGP_129S1SvImJ_T0087846.1 MGP_129S1SvImJ_G0033276.1 mouse_genomes_project 7 148897534 148905199 - Cars protein_coding processed_transcript MGP_129S1SvImJ_T0085403.1 MGP_129S1SvImJ_G0032604.1 mouse_genomes_project 7 105150187 105245566 - MGP_129S1SvImJ_P0085403 Nup98 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0085404.1 MGP_129S1SvImJ_G0032604.1 mouse_genomes_project 7 105165111 105245591 - MGP_129S1SvImJ_P0085404 Nup98 protein_coding protein_coding MGP_129S1SvImJ_T0008835.1 MGP_129S1SvImJ_G0007139.1 mouse_genomes_project 7 33482485 33489307 + Gm26762 lincRNA lincRNA MGP_129S1SvImJ_T0081862.1 MGP_129S1SvImJ_G0031731.1 mouse_genomes_project 7 14972721 14988206 + MGP_129S1SvImJ_P0081862 Psg29 protein_coding protein_coding MGP_129S1SvImJ_T0087207.1 MGP_129S1SvImJ_G0033121.1 mouse_genomes_project 7 138394576 138429992 + MGP_129S1SvImJ_P0087207 Edrf1 protein_coding protein_coding MGP_129S1SvImJ_T0087208.1 MGP_129S1SvImJ_G0033121.1 mouse_genomes_project 7 138394726 138429200 + MGP_129S1SvImJ_P0087208 Edrf1 protein_coding protein_coding MGP_129S1SvImJ_T0087209.1 MGP_129S1SvImJ_G0033121.1 mouse_genomes_project 7 138394894 138396370 + Edrf1 protein_coding retained_intron MGP_129S1SvImJ_T0087210.1 MGP_129S1SvImJ_G0033121.1 mouse_genomes_project 7 138414125 138418902 + MGP_129S1SvImJ_P0087210 Edrf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087211.1 MGP_129S1SvImJ_G0033121.1 mouse_genomes_project 7 138422946 138428950 + MGP_129S1SvImJ_P0087211 Edrf1 protein_coding protein_coding MGP_129S1SvImJ_T0087212.1 MGP_129S1SvImJ_G0033121.1 mouse_genomes_project 7 138424226 138428491 + Edrf1 protein_coding retained_intron MGP_129S1SvImJ_T0015819.1 MGP_129S1SvImJ_G0013908.1 mouse_genomes_project 7 56715596 56716306 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0083714.1 MGP_129S1SvImJ_G0032195.1 mouse_genomes_project 7 45254870 45280109 - MGP_129S1SvImJ_P0083714 Prr12 protein_coding protein_coding MGP_129S1SvImJ_T0008830.1 MGP_129S1SvImJ_G0007134.1 mouse_genomes_project 7 27970379 27979890 + Gm26604 lincRNA lincRNA MGP_129S1SvImJ_T0085884.1 MGP_129S1SvImJ_G0032860.1 mouse_genomes_project 7 114305027 114306195 - Rnf141 protein_coding retained_intron MGP_129S1SvImJ_T0085885.1 MGP_129S1SvImJ_G0032860.1 mouse_genomes_project 7 114305209 114325927 - MGP_129S1SvImJ_P0085885 Rnf141 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085886.1 MGP_129S1SvImJ_G0032860.1 mouse_genomes_project 7 114318130 114350077 - MGP_129S1SvImJ_P0085886 Rnf141 protein_coding protein_coding MGP_129S1SvImJ_T0085887.1 MGP_129S1SvImJ_G0032860.1 mouse_genomes_project 7 114320183 114350003 - MGP_129S1SvImJ_P0085887 Rnf141 protein_coding protein_coding MGP_129S1SvImJ_T0085888.1 MGP_129S1SvImJ_G0032860.1 mouse_genomes_project 7 114321056 114325873 - MGP_129S1SvImJ_P0085888 Rnf141 protein_coding protein_coding MGP_129S1SvImJ_T0085889.1 MGP_129S1SvImJ_G0032860.1 mouse_genomes_project 7 114321192 114326198 - Rnf141 protein_coding retained_intron MGP_129S1SvImJ_T0085890.1 MGP_129S1SvImJ_G0032860.1 mouse_genomes_project 7 114336307 114350055 - Rnf141 protein_coding processed_transcript MGP_129S1SvImJ_T0085891.1 MGP_129S1SvImJ_G0032860.1 mouse_genomes_project 7 114339414 114349810 - MGP_129S1SvImJ_P0085891 Rnf141 protein_coding protein_coding MGP_129S1SvImJ_T0082021.1 MGP_129S1SvImJ_G0031784.1 mouse_genomes_project 7 17593059 17602656 - MGP_129S1SvImJ_P0082021 Gemin7 protein_coding protein_coding MGP_129S1SvImJ_T0082022.1 MGP_129S1SvImJ_G0031784.1 mouse_genomes_project 7 17593062 17602161 - MGP_129S1SvImJ_P0082022 Gemin7 protein_coding protein_coding MGP_129S1SvImJ_T0082023.1 MGP_129S1SvImJ_G0031784.1 mouse_genomes_project 7 17593200 17601786 - MGP_129S1SvImJ_P0082023 Gemin7 protein_coding protein_coding MGP_129S1SvImJ_T0082024.1 MGP_129S1SvImJ_G0031784.1 mouse_genomes_project 7 17593232 17601907 - MGP_129S1SvImJ_P0082024 Gemin7 protein_coding protein_coding MGP_129S1SvImJ_T0082025.1 MGP_129S1SvImJ_G0031784.1 mouse_genomes_project 7 17593359 17602203 - MGP_129S1SvImJ_P0082025 Gemin7 protein_coding protein_coding MGP_129S1SvImJ_T0082026.1 MGP_129S1SvImJ_G0031784.1 mouse_genomes_project 7 17593537 17601992 - MGP_129S1SvImJ_P0082026 Gemin7 protein_coding protein_coding MGP_129S1SvImJ_T0101322.1 MGP_129S1SvImJ_G0039389.1 mouse_genomes_project 7 60724707 60724796 - Gm22373 snoRNA snoRNA MGP_129S1SvImJ_T0084770.1 MGP_129S1SvImJ_G0032434.1 mouse_genomes_project 7 83846335 83852703 + MGP_129S1SvImJ_P0084770 Fam103a1 protein_coding protein_coding MGP_129S1SvImJ_T0084772.1 MGP_129S1SvImJ_G0032434.1 mouse_genomes_project 7 83846460 83851066 + MGP_129S1SvImJ_P0084772 Fam103a1 protein_coding protein_coding MGP_129S1SvImJ_T0083542.1 MGP_129S1SvImJ_G0032159.1 mouse_genomes_project 7 44522055 44540529 - MGP_129S1SvImJ_P0083542 1700008O03Rik protein_coding protein_coding MGP_129S1SvImJ_T0083543.1 MGP_129S1SvImJ_G0032159.1 mouse_genomes_project 7 44522111 44540013 - 1700008O03Rik protein_coding retained_intron MGP_129S1SvImJ_T0083544.1 MGP_129S1SvImJ_G0032159.1 mouse_genomes_project 7 44522249 44539099 - MGP_129S1SvImJ_P0083544 1700008O03Rik protein_coding protein_coding MGP_129S1SvImJ_T0083545.1 MGP_129S1SvImJ_G0032159.1 mouse_genomes_project 7 44524690 44552470 - 1700008O03Rik protein_coding processed_transcript MGP_129S1SvImJ_T0083546.1 MGP_129S1SvImJ_G0032159.1 mouse_genomes_project 7 44545728 44552606 - 1700008O03Rik protein_coding processed_transcript MGP_129S1SvImJ_T0008855.1 MGP_129S1SvImJ_G0007158.1 mouse_genomes_project 7 37595150 37618749 + Gm44635 lincRNA lincRNA MGP_129S1SvImJ_T0008821.1 MGP_129S1SvImJ_G0007126.1 mouse_genomes_project 7 22769645 22772618 + Gm44512 lincRNA lincRNA MGP_129S1SvImJ_T0087399.1 MGP_129S1SvImJ_G0033174.1 mouse_genomes_project 7 145427309 145428287 + MGP_129S1SvImJ_P0087399 Olfr527 protein_coding protein_coding MGP_129S1SvImJ_T0082407.1 MGP_129S1SvImJ_G0031886.1 mouse_genomes_project 7 24986771 25032778 + MGP_129S1SvImJ_P0082407 Nlrp4a protein_coding protein_coding MGP_129S1SvImJ_T0082408.1 MGP_129S1SvImJ_G0031886.1 mouse_genomes_project 7 24987272 25031536 + MGP_129S1SvImJ_P0082408 Nlrp4a protein_coding protein_coding MGP_129S1SvImJ_T0082409.1 MGP_129S1SvImJ_G0031886.1 mouse_genomes_project 7 24987304 25003192 + Nlrp4a protein_coding processed_transcript MGP_129S1SvImJ_T0082410.1 MGP_129S1SvImJ_G0031886.1 mouse_genomes_project 7 24987304 25016650 + MGP_129S1SvImJ_P0082410 Nlrp4a protein_coding protein_coding MGP_129S1SvImJ_T0010849.1 MGP_129S1SvImJ_G0008965.1 mouse_genomes_project 7 334963 335054 + Gm23450 miRNA miRNA MGP_129S1SvImJ_T0084906.1 MGP_129S1SvImJ_G0032493.1 mouse_genomes_project 7 90809516 90872427 + MGP_129S1SvImJ_P0084906 Rab38 protein_coding protein_coding MGP_129S1SvImJ_T0086785.1 MGP_129S1SvImJ_G0033040.1 mouse_genomes_project 7 131829795 131840807 + MGP_129S1SvImJ_P0086785 protein_coding protein_coding MGP_129S1SvImJ_T0086786.1 MGP_129S1SvImJ_G0033040.1 mouse_genomes_project 7 131830611 131833817 + protein_coding processed_transcript MGP_129S1SvImJ_T0086787.1 MGP_129S1SvImJ_G0033040.1 mouse_genomes_project 7 131835816 131842037 + MGP_129S1SvImJ_P0086787 protein_coding protein_coding MGP_129S1SvImJ_T0086788.1 MGP_129S1SvImJ_G0033040.1 mouse_genomes_project 7 131836003 131840071 + protein_coding retained_intron MGP_129S1SvImJ_T0086789.1 MGP_129S1SvImJ_G0033040.1 mouse_genomes_project 7 131836236 131840253 + MGP_129S1SvImJ_P0086789 protein_coding protein_coding MGP_129S1SvImJ_T0086790.1 MGP_129S1SvImJ_G0033040.1 mouse_genomes_project 7 131836242 131840663 + MGP_129S1SvImJ_P0086790 protein_coding protein_coding MGP_129S1SvImJ_T0086791.1 MGP_129S1SvImJ_G0033040.1 mouse_genomes_project 7 131837444 131842235 + protein_coding retained_intron MGP_129S1SvImJ_T0086792.1 MGP_129S1SvImJ_G0033040.1 mouse_genomes_project 7 131837658 131838549 + protein_coding retained_intron MGP_129S1SvImJ_T0083768.1 MGP_129S1SvImJ_G0032213.1 mouse_genomes_project 7 45548261 45579715 - MGP_129S1SvImJ_P0083768 Trpm4 protein_coding protein_coding MGP_129S1SvImJ_T0082795.1 MGP_129S1SvImJ_G0031985.1 mouse_genomes_project 7 28616791 28653069 - MGP_129S1SvImJ_P0082795 Catsperg1 protein_coding protein_coding MGP_129S1SvImJ_T0083859.1 MGP_129S1SvImJ_G0032234.1 mouse_genomes_project 7 45921551 45926980 + MGP_129S1SvImJ_P0083859 Izumo1 protein_coding protein_coding MGP_129S1SvImJ_T0083860.1 MGP_129S1SvImJ_G0032234.1 mouse_genomes_project 7 45924129 45928561 + Izumo1 protein_coding retained_intron MGP_129S1SvImJ_T0084741.1 MGP_129S1SvImJ_G0032426.1 mouse_genomes_project 7 83253559 83390524 + MGP_129S1SvImJ_P0084741 Pde8a protein_coding protein_coding MGP_129S1SvImJ_T0084742.1 MGP_129S1SvImJ_G0032426.1 mouse_genomes_project 7 83351827 83371305 + Pde8a protein_coding processed_transcript MGP_129S1SvImJ_T0084743.1 MGP_129S1SvImJ_G0032426.1 mouse_genomes_project 7 83362813 83375447 + Pde8a protein_coding processed_transcript MGP_129S1SvImJ_T0015911.1 MGP_129S1SvImJ_G0014000.1 mouse_genomes_project 7 126580157 126580398 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015724.1 MGP_129S1SvImJ_G0013813.1 mouse_genomes_project 7 11240308 11241898 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084680.1 MGP_129S1SvImJ_G0032416.1 mouse_genomes_project 7 82431322 82441607 - MGP_129S1SvImJ_P0084680 Blm protein_coding protein_coding MGP_129S1SvImJ_T0084681.1 MGP_129S1SvImJ_G0032416.1 mouse_genomes_project 7 82431817 82514691 - MGP_129S1SvImJ_P0084681 Blm protein_coding protein_coding MGP_129S1SvImJ_T0084682.1 MGP_129S1SvImJ_G0032416.1 mouse_genomes_project 7 82431916 82514570 - MGP_129S1SvImJ_P0084682 Blm protein_coding protein_coding MGP_129S1SvImJ_T0084683.1 MGP_129S1SvImJ_G0032416.1 mouse_genomes_project 7 82432062 82434196 - Blm protein_coding processed_transcript MGP_129S1SvImJ_T0084684.1 MGP_129S1SvImJ_G0032416.1 mouse_genomes_project 7 82432217 82436077 - Blm protein_coding retained_intron MGP_129S1SvImJ_T0084685.1 MGP_129S1SvImJ_G0032416.1 mouse_genomes_project 7 82432245 82437648 - MGP_129S1SvImJ_P0084685 Blm protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084686.1 MGP_129S1SvImJ_G0032416.1 mouse_genomes_project 7 82441576 82444289 - MGP_129S1SvImJ_P0084686 Blm protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084687.1 MGP_129S1SvImJ_G0032416.1 mouse_genomes_project 7 82446037 82493235 - Blm protein_coding retained_intron MGP_129S1SvImJ_T0084688.1 MGP_129S1SvImJ_G0032416.1 mouse_genomes_project 7 82446063 82448571 - Blm protein_coding retained_intron MGP_129S1SvImJ_T0084689.1 MGP_129S1SvImJ_G0032416.1 mouse_genomes_project 7 82450912 82460603 - Blm protein_coding retained_intron MGP_129S1SvImJ_T0101308.1 MGP_129S1SvImJ_G0039375.1 mouse_genomes_project 7 45361623 45361713 - Snord35a snoRNA snoRNA MGP_129S1SvImJ_T0084041.1 MGP_129S1SvImJ_G0032291.1 mouse_genomes_project 7 49107320 49123898 - MGP_129S1SvImJ_P0084041 Mrgprx2 protein_coding protein_coding MGP_129S1SvImJ_T0084042.1 MGP_129S1SvImJ_G0032291.1 mouse_genomes_project 7 49109327 49120702 - MGP_129S1SvImJ_P0084042 Mrgprx2 protein_coding protein_coding MGP_129S1SvImJ_T0084026.1 MGP_129S1SvImJ_G0032281.1 mouse_genomes_project 7 47494846 47550744 - MGP_129S1SvImJ_P0084026 Ptpn5 protein_coding protein_coding MGP_129S1SvImJ_T0084027.1 MGP_129S1SvImJ_G0032281.1 mouse_genomes_project 7 47494850 47549738 - MGP_129S1SvImJ_P0084027 Ptpn5 protein_coding protein_coding MGP_129S1SvImJ_T0081420.1 MGP_129S1SvImJ_G0031559.1 mouse_genomes_project 7 1682225 1708644 - MGP_129S1SvImJ_P0081420 Fam71e2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081421.1 MGP_129S1SvImJ_G0031559.1 mouse_genomes_project 7 1682228 1708644 - MGP_129S1SvImJ_P0081421 Fam71e2 protein_coding protein_coding MGP_129S1SvImJ_T0085831.1 MGP_129S1SvImJ_G0032847.1 mouse_genomes_project 7 113178885 113196768 - MGP_129S1SvImJ_P0085831 Tmem9b protein_coding protein_coding MGP_129S1SvImJ_T0085832.1 MGP_129S1SvImJ_G0032847.1 mouse_genomes_project 7 113189943 113196836 - MGP_129S1SvImJ_P0085832 Tmem9b protein_coding protein_coding MGP_129S1SvImJ_T0015887.1 MGP_129S1SvImJ_G0013976.1 mouse_genomes_project 7 103473932 103474285 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0087030.1 MGP_129S1SvImJ_G0033085.1 mouse_genomes_project 7 133044777 133106415 + Inpp5f protein_coding processed_transcript MGP_129S1SvImJ_T0087031.1 MGP_129S1SvImJ_G0033085.1 mouse_genomes_project 7 133044809 133133593 + MGP_129S1SvImJ_P0087031 Inpp5f protein_coding protein_coding MGP_129S1SvImJ_T0087032.1 MGP_129S1SvImJ_G0033085.1 mouse_genomes_project 7 133093676 133112280 + Inpp5f protein_coding retained_intron MGP_129S1SvImJ_T0087033.1 MGP_129S1SvImJ_G0033085.1 mouse_genomes_project 7 133098341 133103230 + Inpp5f protein_coding processed_transcript MGP_129S1SvImJ_T0087034.1 MGP_129S1SvImJ_G0033085.1 mouse_genomes_project 7 133102349 133103435 + Inpp5f protein_coding retained_intron MGP_129S1SvImJ_T0087035.1 MGP_129S1SvImJ_G0033085.1 mouse_genomes_project 7 133114496 133133442 + Inpp5f protein_coding retained_intron MGP_129S1SvImJ_T0087036.1 MGP_129S1SvImJ_G0033085.1 mouse_genomes_project 7 133123867 133130826 + MGP_129S1SvImJ_P0087036 Inpp5f protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087037.1 MGP_129S1SvImJ_G0033085.1 mouse_genomes_project 7 133124614 133133444 + MGP_129S1SvImJ_P0087037 Inpp5f protein_coding protein_coding MGP_129S1SvImJ_T0010886.1 MGP_129S1SvImJ_G0009002.1 mouse_genomes_project 7 45057725 45057798 + Mir707 miRNA miRNA MGP_129S1SvImJ_T0010943.1 MGP_129S1SvImJ_G0009059.1 mouse_genomes_project 7 131841365 131841456 + miRNA miRNA MGP_129S1SvImJ_T0010899.1 MGP_129S1SvImJ_G0009015.1 mouse_genomes_project 7 62717846 62717915 - Mir344d-1 miRNA miRNA MGP_129S1SvImJ_T0082751.1 MGP_129S1SvImJ_G0031975.1 mouse_genomes_project 7 28081581 28088036 - MGP_129S1SvImJ_P0082751 Psmd8 protein_coding protein_coding MGP_129S1SvImJ_T0082752.1 MGP_129S1SvImJ_G0031975.1 mouse_genomes_project 7 28081581 28088064 - MGP_129S1SvImJ_P0082752 Psmd8 protein_coding protein_coding MGP_129S1SvImJ_T0082753.1 MGP_129S1SvImJ_G0031975.1 mouse_genomes_project 7 28081581 28087915 - MGP_129S1SvImJ_P0082753 Psmd8 protein_coding protein_coding MGP_129S1SvImJ_T0085521.1 MGP_129S1SvImJ_G0032688.1 mouse_genomes_project 7 107115228 107116152 - MGP_129S1SvImJ_P0085521 Olfr64 protein_coding protein_coding MGP_129S1SvImJ_T0084334.1 MGP_129S1SvImJ_G0032356.1 mouse_genomes_project 7 68077939 68207801 + Adamts17 protein_coding retained_intron MGP_129S1SvImJ_T0084335.1 MGP_129S1SvImJ_G0032356.1 mouse_genomes_project 7 68077939 68270424 + Adamts17 protein_coding retained_intron MGP_129S1SvImJ_T0084336.1 MGP_129S1SvImJ_G0032356.1 mouse_genomes_project 7 68077939 68398814 + MGP_129S1SvImJ_P0084336 Adamts17 protein_coding protein_coding MGP_129S1SvImJ_T0084337.1 MGP_129S1SvImJ_G0032356.1 mouse_genomes_project 7 68078017 68398818 + MGP_129S1SvImJ_P0084337 Adamts17 protein_coding protein_coding MGP_129S1SvImJ_T0084338.1 MGP_129S1SvImJ_G0032356.1 mouse_genomes_project 7 68080459 68304817 + Adamts17 protein_coding processed_transcript MGP_129S1SvImJ_T0084339.1 MGP_129S1SvImJ_G0032356.1 mouse_genomes_project 7 68089315 68111497 + Adamts17 protein_coding processed_transcript MGP_129S1SvImJ_T0084340.1 MGP_129S1SvImJ_G0032356.1 mouse_genomes_project 7 68153202 68207801 + Adamts17 protein_coding processed_transcript MGP_129S1SvImJ_T0084341.1 MGP_129S1SvImJ_G0032356.1 mouse_genomes_project 7 68289561 68322931 + MGP_129S1SvImJ_P0084341 Adamts17 protein_coding protein_coding MGP_129S1SvImJ_T0009040.1 MGP_129S1SvImJ_G0007276.1 mouse_genomes_project 7 131783758 131788640 + Gm45184 lincRNA lincRNA MGP_129S1SvImJ_T0002254.1 MGP_129S1SvImJ_G0002166.1 mouse_genomes_project 7 55753368 55754140 - TEC TEC MGP_129S1SvImJ_T0082828.1 MGP_129S1SvImJ_G0031994.1 mouse_genomes_project 7 28891292 28893664 + MGP_129S1SvImJ_P0082828 protein_coding protein_coding MGP_129S1SvImJ_T0081526.1 MGP_129S1SvImJ_G0031605.1 mouse_genomes_project 7 3536936 3537997 + MGP_129S1SvImJ_P0081526 Olfr1344 protein_coding protein_coding MGP_129S1SvImJ_T0010871.1 MGP_129S1SvImJ_G0008987.1 mouse_genomes_project 7 25826689 25826809 + Mir1191 miRNA miRNA MGP_129S1SvImJ_T0101306.1 MGP_129S1SvImJ_G0039373.1 mouse_genomes_project 7 44396248 44396341 + Gm23991 snoRNA snoRNA MGP_129S1SvImJ_T0085755.1 MGP_129S1SvImJ_G0032799.1 mouse_genomes_project 7 111089883 111099461 - MGP_129S1SvImJ_P0085755 Cyb5r2 protein_coding protein_coding MGP_129S1SvImJ_T0085756.1 MGP_129S1SvImJ_G0032799.1 mouse_genomes_project 7 111091652 111098691 - MGP_129S1SvImJ_P0085756 Cyb5r2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0085600.1 MGP_129S1SvImJ_G0032738.1 mouse_genomes_project 7 108278682 108279624 + MGP_129S1SvImJ_P0085600 Olfr678 protein_coding protein_coding MGP_129S1SvImJ_T0086253.1 MGP_129S1SvImJ_G0032943.1 mouse_genomes_project 7 125682417 125747135 - MGP_129S1SvImJ_P0086253 Usp31 protein_coding protein_coding MGP_129S1SvImJ_T0086254.1 MGP_129S1SvImJ_G0032943.1 mouse_genomes_project 7 125699178 125706772 - Usp31 protein_coding retained_intron MGP_129S1SvImJ_T0084304.1 MGP_129S1SvImJ_G0032349.1 mouse_genomes_project 7 67329091 67398000 + MGP_129S1SvImJ_P0084304 Chsy1 protein_coding protein_coding MGP_129S1SvImJ_T0102752.1 MGP_129S1SvImJ_G0040584.1 mouse_genomes_project 7 47995727 47996685 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0008932.1 MGP_129S1SvImJ_G0007213.1 mouse_genomes_project 7 75411887 75422279 + lincRNA lincRNA MGP_129S1SvImJ_T0002329.1 MGP_129S1SvImJ_G0002240.1 mouse_genomes_project 7 130662947 130664835 + TEC TEC MGP_129S1SvImJ_T0083553.1 MGP_129S1SvImJ_G0032161.1 mouse_genomes_project 7 44600146 44632068 + MGP_129S1SvImJ_P0083553 Lrrc4b protein_coding protein_coding MGP_129S1SvImJ_T0083554.1 MGP_129S1SvImJ_G0032161.1 mouse_genomes_project 7 44613467 44634059 + MGP_129S1SvImJ_P0083554 Lrrc4b protein_coding protein_coding MGP_129S1SvImJ_T0083555.1 MGP_129S1SvImJ_G0032161.1 mouse_genomes_project 7 44613719 44632114 + MGP_129S1SvImJ_P0083555 Lrrc4b protein_coding protein_coding MGP_129S1SvImJ_T0086855.1 MGP_129S1SvImJ_G0033051.1 mouse_genomes_project 7 132116210 132121421 + MGP_129S1SvImJ_P0086855 Fbxl19 protein_coding protein_coding MGP_129S1SvImJ_T0086856.1 MGP_129S1SvImJ_G0033051.1 mouse_genomes_project 7 132116868 132141774 + MGP_129S1SvImJ_P0086856 Fbxl19 protein_coding protein_coding MGP_129S1SvImJ_T0086857.1 MGP_129S1SvImJ_G0033051.1 mouse_genomes_project 7 132117437 132121424 + MGP_129S1SvImJ_P0086857 Fbxl19 protein_coding protein_coding MGP_129S1SvImJ_T0086858.1 MGP_129S1SvImJ_G0033051.1 mouse_genomes_project 7 132117453 132142323 + MGP_129S1SvImJ_P0086858 Fbxl19 protein_coding protein_coding MGP_129S1SvImJ_T0086859.1 MGP_129S1SvImJ_G0033051.1 mouse_genomes_project 7 132118481 132141775 + MGP_129S1SvImJ_P0086859 Fbxl19 protein_coding protein_coding MGP_129S1SvImJ_T0086860.1 MGP_129S1SvImJ_G0033051.1 mouse_genomes_project 7 132119853 132141574 + MGP_129S1SvImJ_P0086860 Fbxl19 protein_coding protein_coding MGP_129S1SvImJ_T0086861.1 MGP_129S1SvImJ_G0033051.1 mouse_genomes_project 7 132119980 132142330 + MGP_129S1SvImJ_P0086861 Fbxl19 protein_coding protein_coding MGP_129S1SvImJ_T0008861.1 MGP_129S1SvImJ_G0007161.1 mouse_genomes_project 7 39539995 39547858 - lincRNA lincRNA MGP_129S1SvImJ_T0008862.1 MGP_129S1SvImJ_G0007161.1 mouse_genomes_project 7 39539999 39547875 - lincRNA lincRNA MGP_129S1SvImJ_T0008863.1 MGP_129S1SvImJ_G0007161.1 mouse_genomes_project 7 39540000 39547896 - lincRNA lincRNA MGP_129S1SvImJ_T0008864.1 MGP_129S1SvImJ_G0007161.1 mouse_genomes_project 7 39540053 39547859 - lincRNA lincRNA MGP_129S1SvImJ_T0085535.1 MGP_129S1SvImJ_G0032702.1 mouse_genomes_project 7 107351021 107352936 - MGP_129S1SvImJ_P0085535 4931431F19Rik protein_coding protein_coding MGP_129S1SvImJ_T0086468.1 MGP_129S1SvImJ_G0032982.1 mouse_genomes_project 7 130765757 130769124 + MGP_129S1SvImJ_P0086468 Tufm protein_coding protein_coding MGP_129S1SvImJ_T0086470.1 MGP_129S1SvImJ_G0032982.1 mouse_genomes_project 7 130765774 130769128 + MGP_129S1SvImJ_P0086470 Tufm protein_coding protein_coding MGP_129S1SvImJ_T0086471.1 MGP_129S1SvImJ_G0032982.1 mouse_genomes_project 7 130766025 130767343 + Tufm protein_coding processed_transcript MGP_129S1SvImJ_T0086472.1 MGP_129S1SvImJ_G0032982.1 mouse_genomes_project 7 130767010 130767530 + Tufm protein_coding retained_intron MGP_129S1SvImJ_T0086473.1 MGP_129S1SvImJ_G0032982.1 mouse_genomes_project 7 130767082 130767772 + MGP_129S1SvImJ_P0086473 Tufm protein_coding protein_coding MGP_129S1SvImJ_T0086474.1 MGP_129S1SvImJ_G0032982.1 mouse_genomes_project 7 130767767 130768626 + MGP_129S1SvImJ_P0086474 Tufm protein_coding protein_coding MGP_129S1SvImJ_T0082823.1 MGP_129S1SvImJ_G0031993.1 mouse_genomes_project 7 28868239 28880955 - MGP_129S1SvImJ_P0082823 Zfp74 protein_coding protein_coding MGP_129S1SvImJ_T0082824.1 MGP_129S1SvImJ_G0031993.1 mouse_genomes_project 7 28868894 28891759 - MGP_129S1SvImJ_P0082824 Zfp74 protein_coding protein_coding MGP_129S1SvImJ_T0082825.1 MGP_129S1SvImJ_G0031993.1 mouse_genomes_project 7 28869976 28891759 - MGP_129S1SvImJ_P0082825 Zfp74 protein_coding protein_coding MGP_129S1SvImJ_T0082826.1 MGP_129S1SvImJ_G0031993.1 mouse_genomes_project 7 28871431 28880707 - MGP_129S1SvImJ_P0082826 Zfp74 protein_coding protein_coding MGP_129S1SvImJ_T0082827.1 MGP_129S1SvImJ_G0031993.1 mouse_genomes_project 7 28875136 28891761 - Zfp74 protein_coding processed_transcript MGP_129S1SvImJ_T0087871.1 MGP_129S1SvImJ_G0033284.1 mouse_genomes_project 7 149159522 149177391 + MGP_129S1SvImJ_P0087871 Dhcr7 protein_coding protein_coding MGP_129S1SvImJ_T0087872.1 MGP_129S1SvImJ_G0033284.1 mouse_genomes_project 7 149159950 149179261 + MGP_129S1SvImJ_P0087872 Dhcr7 protein_coding protein_coding MGP_129S1SvImJ_T0087873.1 MGP_129S1SvImJ_G0033284.1 mouse_genomes_project 7 149160107 149175443 + MGP_129S1SvImJ_P0087873 Dhcr7 protein_coding protein_coding MGP_129S1SvImJ_T0087874.1 MGP_129S1SvImJ_G0033284.1 mouse_genomes_project 7 149160111 149173020 + MGP_129S1SvImJ_P0087874 Dhcr7 protein_coding protein_coding MGP_129S1SvImJ_T0087875.1 MGP_129S1SvImJ_G0033284.1 mouse_genomes_project 7 149160131 149167762 + Dhcr7 protein_coding processed_transcript MGP_129S1SvImJ_T0087876.1 MGP_129S1SvImJ_G0033284.1 mouse_genomes_project 7 149170802 149173173 + Dhcr7 protein_coding processed_transcript MGP_129S1SvImJ_T0087877.1 MGP_129S1SvImJ_G0033284.1 mouse_genomes_project 7 149171207 149177283 + Dhcr7 protein_coding processed_transcript MGP_129S1SvImJ_T0015790.1 MGP_129S1SvImJ_G0013879.1 mouse_genomes_project 7 41367088 41368928 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100094.1 MGP_129S1SvImJ_G0038161.1 mouse_genomes_project 7 132463587 132463743 - Gm22809 snRNA snRNA MGP_129S1SvImJ_T0087265.1 MGP_129S1SvImJ_G0033138.1 mouse_genomes_project 7 142120435 142243675 - MGP_129S1SvImJ_P0087265 Ebf3 protein_coding protein_coding MGP_129S1SvImJ_T0087266.1 MGP_129S1SvImJ_G0033138.1 mouse_genomes_project 7 142120435 142243675 - MGP_129S1SvImJ_P0087266 Ebf3 protein_coding protein_coding MGP_129S1SvImJ_T0087267.1 MGP_129S1SvImJ_G0033138.1 mouse_genomes_project 7 142120435 142243675 - MGP_129S1SvImJ_P0087267 Ebf3 protein_coding protein_coding MGP_129S1SvImJ_T0087268.1 MGP_129S1SvImJ_G0033138.1 mouse_genomes_project 7 142121460 142243644 - MGP_129S1SvImJ_P0087268 Ebf3 protein_coding protein_coding MGP_129S1SvImJ_T0084094.1 MGP_129S1SvImJ_G0032307.1 mouse_genomes_project 7 52627463 52760443 + MGP_129S1SvImJ_P0084094 Gas2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084095.1 MGP_129S1SvImJ_G0032307.1 mouse_genomes_project 7 52627836 52762553 + MGP_129S1SvImJ_P0084095 Gas2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0084096.1 MGP_129S1SvImJ_G0032307.1 mouse_genomes_project 7 52627875 52731462 + MGP_129S1SvImJ_P0084096 Gas2 protein_coding protein_coding MGP_129S1SvImJ_T0084097.1 MGP_129S1SvImJ_G0032307.1 mouse_genomes_project 7 52629352 52629846 + Gas2 protein_coding retained_intron MGP_129S1SvImJ_T0084098.1 MGP_129S1SvImJ_G0032307.1 mouse_genomes_project 7 52647726 52708675 + MGP_129S1SvImJ_P0084098 Gas2 protein_coding protein_coding MGP_129S1SvImJ_T0084099.1 MGP_129S1SvImJ_G0032307.1 mouse_genomes_project 7 52691383 52708713 + Gas2 protein_coding processed_transcript MGP_129S1SvImJ_T0084100.1 MGP_129S1SvImJ_G0032307.1 mouse_genomes_project 7 52708629 52721909 + Gas2 protein_coding processed_transcript MGP_129S1SvImJ_T0083413.1 MGP_129S1SvImJ_G0032113.1 mouse_genomes_project 7 41836154 41892497 - MGP_129S1SvImJ_P0083413 Vmn2r59 protein_coding protein_coding MGP_129S1SvImJ_T0010891.1 MGP_129S1SvImJ_G0009007.1 mouse_genomes_project 7 47500196 47500255 - Mir7056 miRNA miRNA MGP_129S1SvImJ_T0083480.1 MGP_129S1SvImJ_G0032133.1 mouse_genomes_project 7 43630398 43645326 + MGP_129S1SvImJ_P0083480 Zfp819 protein_coding protein_coding MGP_129S1SvImJ_T0083481.1 MGP_129S1SvImJ_G0032133.1 mouse_genomes_project 7 43630438 43637788 + MGP_129S1SvImJ_P0083481 Zfp819 protein_coding protein_coding MGP_129S1SvImJ_T0083482.1 MGP_129S1SvImJ_G0032133.1 mouse_genomes_project 7 43630454 43645395 + MGP_129S1SvImJ_P0083482 Zfp819 protein_coding protein_coding MGP_129S1SvImJ_T0083483.1 MGP_129S1SvImJ_G0032133.1 mouse_genomes_project 7 43633124 43645028 + MGP_129S1SvImJ_P0083483 Zfp819 protein_coding protein_coding MGP_129S1SvImJ_T0009009.1 MGP_129S1SvImJ_G0007257.1 mouse_genomes_project 7 120294387 120298710 + lincRNA lincRNA MGP_129S1SvImJ_T0011700.1 MGP_129S1SvImJ_G0009816.1 mouse_genomes_project 7 13590751 13590999 + Gm24576 misc_RNA misc_RNA MGP_129S1SvImJ_T0005207.1 MGP_129S1SvImJ_G0004434.1 mouse_genomes_project 7 29746319 29761375 + Gm26935 antisense antisense MGP_129S1SvImJ_T0081572.1 MGP_129S1SvImJ_G0031639.1 mouse_genomes_project 7 9539255 9540197 + MGP_129S1SvImJ_P0081572 Vmn1r78 protein_coding protein_coding MGP_129S1SvImJ_T0085977.1 MGP_129S1SvImJ_G0032880.1 mouse_genomes_project 7 117880140 117920262 - MGP_129S1SvImJ_P0085977 Copb1 protein_coding protein_coding MGP_129S1SvImJ_T0087126.1 MGP_129S1SvImJ_G0033102.1 mouse_genomes_project 7 135968550 135990936 - MGP_129S1SvImJ_P0087126 2310057M21Rik protein_coding protein_coding MGP_129S1SvImJ_T0085451.1 MGP_129S1SvImJ_G0032624.1 mouse_genomes_project 7 105767574 105777295 + MGP_129S1SvImJ_P0085451 Olfr558 protein_coding protein_coding MGP_129S1SvImJ_T0086731.1 MGP_129S1SvImJ_G0033025.1 mouse_genomes_project 7 131542520 131547800 + MGP_129S1SvImJ_P0086731 Mylpf protein_coding protein_coding MGP_129S1SvImJ_T0086732.1 MGP_129S1SvImJ_G0033025.1 mouse_genomes_project 7 131546038 131548565 + MGP_129S1SvImJ_P0086732 Mylpf protein_coding protein_coding MGP_129S1SvImJ_T0086733.1 MGP_129S1SvImJ_G0033025.1 mouse_genomes_project 7 131546956 131547765 + MGP_129S1SvImJ_P0086733 Mylpf protein_coding protein_coding MGP_129S1SvImJ_T0086734.1 MGP_129S1SvImJ_G0033025.1 mouse_genomes_project 7 131547391 131547733 + Mylpf protein_coding retained_intron MGP_129S1SvImJ_T0086735.1 MGP_129S1SvImJ_G0033025.1 mouse_genomes_project 7 131548173 131548565 + Mylpf protein_coding retained_intron MGP_129S1SvImJ_T0082506.1 MGP_129S1SvImJ_G0031911.1 mouse_genomes_project 7 26101669 26122716 + MGP_129S1SvImJ_P0082506 Blvrb protein_coding protein_coding MGP_129S1SvImJ_T0082507.1 MGP_129S1SvImJ_G0031911.1 mouse_genomes_project 7 26101723 26122570 + MGP_129S1SvImJ_P0082507 Blvrb protein_coding protein_coding MGP_129S1SvImJ_T0082508.1 MGP_129S1SvImJ_G0031911.1 mouse_genomes_project 7 26101745 26113904 + MGP_129S1SvImJ_P0082508 Blvrb protein_coding protein_coding MGP_129S1SvImJ_T0082509.1 MGP_129S1SvImJ_G0031911.1 mouse_genomes_project 7 26106121 26122556 + MGP_129S1SvImJ_P0082509 Blvrb protein_coding protein_coding MGP_129S1SvImJ_T0082510.1 MGP_129S1SvImJ_G0031911.1 mouse_genomes_project 7 26106147 26117373 + Blvrb protein_coding processed_transcript MGP_129S1SvImJ_T0018416.1 MGP_129S1SvImJ_G0015675.1 mouse_genomes_project 7 75102673 75121902 - 1810026B05Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018417.1 MGP_129S1SvImJ_G0015675.1 mouse_genomes_project 7 75107506 75121751 - 1810026B05Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018418.1 MGP_129S1SvImJ_G0015675.1 mouse_genomes_project 7 75107507 75121654 - 1810026B05Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018419.1 MGP_129S1SvImJ_G0015675.1 mouse_genomes_project 7 75107512 75110361 - 1810026B05Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018420.1 MGP_129S1SvImJ_G0015675.1 mouse_genomes_project 7 75107713 75119427 - 1810026B05Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018421.1 MGP_129S1SvImJ_G0015675.1 mouse_genomes_project 7 75107734 75121480 - 1810026B05Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018422.1 MGP_129S1SvImJ_G0015675.1 mouse_genomes_project 7 75107776 75121755 - 1810026B05Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018423.1 MGP_129S1SvImJ_G0015675.1 mouse_genomes_project 7 75118654 75121893 - 1810026B05Rik processed_transcript retained_intron MGP_129S1SvImJ_T0005198.1 MGP_129S1SvImJ_G0004427.1 mouse_genomes_project 7 28044357 28046007 - Gm16282 antisense antisense MGP_129S1SvImJ_T0018473.1 MGP_129S1SvImJ_G0015703.1 mouse_genomes_project 7 148302700 148334292 - R74862 processed_transcript processed_transcript MGP_129S1SvImJ_T0018474.1 MGP_129S1SvImJ_G0015703.1 mouse_genomes_project 7 148313525 148334561 - R74862 processed_transcript processed_transcript MGP_129S1SvImJ_T0018475.1 MGP_129S1SvImJ_G0015703.1 mouse_genomes_project 7 148314188 148334552 - R74862 processed_transcript processed_transcript MGP_129S1SvImJ_T0015868.1 MGP_129S1SvImJ_G0013957.1 mouse_genomes_project 7 92516605 92517097 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085758.1 MGP_129S1SvImJ_G0032801.1 mouse_genomes_project 7 111158312 111159239 + MGP_129S1SvImJ_P0085758 Olfr467 protein_coding protein_coding MGP_129S1SvImJ_T0087545.1 MGP_129S1SvImJ_G0033224.1 mouse_genomes_project 7 146511492 146517046 + Tmem80 protein_coding processed_transcript MGP_129S1SvImJ_T0087546.1 MGP_129S1SvImJ_G0033224.1 mouse_genomes_project 7 146511641 146521702 + MGP_129S1SvImJ_P0087546 Tmem80 protein_coding protein_coding MGP_129S1SvImJ_T0087547.1 MGP_129S1SvImJ_G0033224.1 mouse_genomes_project 7 146511641 146520763 + MGP_129S1SvImJ_P0087547 Tmem80 protein_coding protein_coding MGP_129S1SvImJ_T0087548.1 MGP_129S1SvImJ_G0033224.1 mouse_genomes_project 7 146511883 146521357 + MGP_129S1SvImJ_P0087548 Tmem80 protein_coding protein_coding MGP_129S1SvImJ_T0087549.1 MGP_129S1SvImJ_G0033224.1 mouse_genomes_project 7 146511883 146521702 + MGP_129S1SvImJ_P0087549 Tmem80 protein_coding protein_coding MGP_129S1SvImJ_T0087550.1 MGP_129S1SvImJ_G0033224.1 mouse_genomes_project 7 146511913 146517087 + Tmem80 protein_coding processed_transcript MGP_129S1SvImJ_T0087551.1 MGP_129S1SvImJ_G0033224.1 mouse_genomes_project 7 146517073 146521359 + MGP_129S1SvImJ_P0087551 Tmem80 protein_coding protein_coding MGP_129S1SvImJ_T0087552.1 MGP_129S1SvImJ_G0033224.1 mouse_genomes_project 7 146517140 146520613 + MGP_129S1SvImJ_P0087552 Tmem80 protein_coding protein_coding MGP_129S1SvImJ_T0087553.1 MGP_129S1SvImJ_G0033224.1 mouse_genomes_project 7 146517417 146520693 + Tmem80 protein_coding retained_intron MGP_129S1SvImJ_T0083477.1 MGP_129S1SvImJ_G0032132.1 mouse_genomes_project 7 43602163 43616465 + MGP_129S1SvImJ_P0083477 Zfp719 protein_coding protein_coding MGP_129S1SvImJ_T0083478.1 MGP_129S1SvImJ_G0032132.1 mouse_genomes_project 7 43602172 43612805 + MGP_129S1SvImJ_P0083478 Zfp719 protein_coding protein_coding MGP_129S1SvImJ_T0083479.1 MGP_129S1SvImJ_G0032132.1 mouse_genomes_project 7 43602192 43607738 + Zfp719 protein_coding retained_intron MGP_129S1SvImJ_T0083770.1 MGP_129S1SvImJ_G0032215.1 mouse_genomes_project 7 45585060 45616278 - MGP_129S1SvImJ_P0083770 Ppfia3 protein_coding protein_coding MGP_129S1SvImJ_T0083771.1 MGP_129S1SvImJ_G0032215.1 mouse_genomes_project 7 45585061 45586706 - Ppfia3 protein_coding processed_transcript MGP_129S1SvImJ_T0083772.1 MGP_129S1SvImJ_G0032215.1 mouse_genomes_project 7 45585061 45616590 - MGP_129S1SvImJ_P0083772 Ppfia3 protein_coding protein_coding MGP_129S1SvImJ_T0083773.1 MGP_129S1SvImJ_G0032215.1 mouse_genomes_project 7 45585207 45616590 - Ppfia3 protein_coding retained_intron MGP_129S1SvImJ_T0083774.1 MGP_129S1SvImJ_G0032215.1 mouse_genomes_project 7 45585209 45609681 - MGP_129S1SvImJ_P0083774 Ppfia3 protein_coding protein_coding MGP_129S1SvImJ_T0083775.1 MGP_129S1SvImJ_G0032215.1 mouse_genomes_project 7 45585215 45586697 - Ppfia3 protein_coding processed_transcript MGP_129S1SvImJ_T0083776.1 MGP_129S1SvImJ_G0032215.1 mouse_genomes_project 7 45585756 45587095 - Ppfia3 protein_coding retained_intron MGP_129S1SvImJ_T0015735.1 MGP_129S1SvImJ_G0013824.1 mouse_genomes_project 7 14420030 14420583 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0083346.1 MGP_129S1SvImJ_G0032097.1 mouse_genomes_project 7 36171724 36252110 + MGP_129S1SvImJ_P0083346 Tshz3 protein_coding protein_coding MGP_129S1SvImJ_T0083347.1 MGP_129S1SvImJ_G0032097.1 mouse_genomes_project 7 36172974 36176873 + Tshz3 protein_coding processed_transcript MGP_129S1SvImJ_T0082039.1 MGP_129S1SvImJ_G0031789.1 mouse_genomes_project 7 17711937 17716572 - MGP_129S1SvImJ_P0082039 protein_coding protein_coding MGP_129S1SvImJ_T0082040.1 MGP_129S1SvImJ_G0031789.1 mouse_genomes_project 7 17711942 17713241 - MGP_129S1SvImJ_P0082040 protein_coding protein_coding MGP_129S1SvImJ_T0082041.1 MGP_129S1SvImJ_G0031789.1 mouse_genomes_project 7 17711942 17721151 - MGP_129S1SvImJ_P0082041 protein_coding protein_coding MGP_129S1SvImJ_T0082042.1 MGP_129S1SvImJ_G0031789.1 mouse_genomes_project 7 17711942 17717660 - MGP_129S1SvImJ_P0082042 protein_coding protein_coding MGP_129S1SvImJ_T0082043.1 MGP_129S1SvImJ_G0031789.1 mouse_genomes_project 7 17712604 17721164 - MGP_129S1SvImJ_P0082043 protein_coding protein_coding MGP_129S1SvImJ_T0086356.1 MGP_129S1SvImJ_G0032962.1 mouse_genomes_project 7 127514701 127546290 + MGP_129S1SvImJ_P0086356 Lcmt1 protein_coding protein_coding MGP_129S1SvImJ_T0086357.1 MGP_129S1SvImJ_G0032962.1 mouse_genomes_project 7 127522893 127574688 + MGP_129S1SvImJ_P0086357 Lcmt1 protein_coding protein_coding MGP_129S1SvImJ_T0086358.1 MGP_129S1SvImJ_G0032962.1 mouse_genomes_project 7 127522967 127574679 + MGP_129S1SvImJ_P0086358 Lcmt1 protein_coding protein_coding MGP_129S1SvImJ_T0086359.1 MGP_129S1SvImJ_G0032962.1 mouse_genomes_project 7 127552992 127567086 + Lcmt1 protein_coding processed_transcript MGP_129S1SvImJ_T0086360.1 MGP_129S1SvImJ_G0032962.1 mouse_genomes_project 7 127562472 127574674 + Lcmt1 protein_coding retained_intron MGP_129S1SvImJ_T0086361.1 MGP_129S1SvImJ_G0032962.1 mouse_genomes_project 7 127572189 127574678 + Lcmt1 protein_coding retained_intron MGP_129S1SvImJ_T0085435.1 MGP_129S1SvImJ_G0032609.1 mouse_genomes_project 7 105536557 105537687 - MGP_129S1SvImJ_P0085435 Olfr543 protein_coding protein_coding MGP_129S1SvImJ_T0002299.1 MGP_129S1SvImJ_G0002210.1 mouse_genomes_project 7 81399363 81399710 + TEC TEC MGP_129S1SvImJ_T0081565.1 MGP_129S1SvImJ_G0031632.1 mouse_genomes_project 7 8349508 8354700 - MGP_129S1SvImJ_P0081565 protein_coding protein_coding MGP_129S1SvImJ_T0101330.1 MGP_129S1SvImJ_G0039397.1 mouse_genomes_project 7 85140184 85140316 + Gm22934 snoRNA snoRNA MGP_129S1SvImJ_T0009018.1 MGP_129S1SvImJ_G0007265.1 mouse_genomes_project 7 129491739 129543861 - 4933440M02Rik lincRNA lincRNA MGP_129S1SvImJ_T0009019.1 MGP_129S1SvImJ_G0007265.1 mouse_genomes_project 7 129535179 129555391 - 4933440M02Rik lincRNA lincRNA MGP_129S1SvImJ_T0009020.1 MGP_129S1SvImJ_G0007265.1 mouse_genomes_project 7 129537318 129555407 - 4933440M02Rik lincRNA lincRNA MGP_129S1SvImJ_T0102690.1 MGP_129S1SvImJ_G0040523.1 mouse_genomes_project 7 9778207 9778819 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102697.1 MGP_129S1SvImJ_G0040530.1 mouse_genomes_project 7 11131522 11138413 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0100041.1 MGP_129S1SvImJ_G0038108.1 mouse_genomes_project 7 10328758 10328865 + Gm26325 snRNA snRNA MGP_129S1SvImJ_T0082428.1 MGP_129S1SvImJ_G0031895.1 mouse_genomes_project 7 25728913 25744598 + MGP_129S1SvImJ_P0082428 Cyp2f2 protein_coding protein_coding MGP_129S1SvImJ_T0082429.1 MGP_129S1SvImJ_G0031895.1 mouse_genomes_project 7 25728965 25736278 + Cyp2f2 protein_coding processed_transcript MGP_129S1SvImJ_T0082430.1 MGP_129S1SvImJ_G0031895.1 mouse_genomes_project 7 25732803 25742173 + MGP_129S1SvImJ_P0082430 Cyp2f2 protein_coding protein_coding MGP_129S1SvImJ_T0087694.1 MGP_129S1SvImJ_G0033251.1 mouse_genomes_project 7 147509381 147519879 - MGP_129S1SvImJ_P0087694 protein_coding protein_coding MGP_129S1SvImJ_T0008833.1 MGP_129S1SvImJ_G0007137.1 mouse_genomes_project 7 29666289 29668606 + Gm26610 lincRNA lincRNA MGP_129S1SvImJ_T0084466.1 MGP_129S1SvImJ_G0032379.1 mouse_genomes_project 7 80614498 80624362 + MGP_129S1SvImJ_P0084466 Mrps11 protein_coding protein_coding MGP_129S1SvImJ_T0084467.1 MGP_129S1SvImJ_G0032379.1 mouse_genomes_project 7 80614692 80622616 + Mrps11 protein_coding retained_intron MGP_129S1SvImJ_T0084468.1 MGP_129S1SvImJ_G0032379.1 mouse_genomes_project 7 80614734 80620793 + Mrps11 protein_coding retained_intron MGP_129S1SvImJ_T0084469.1 MGP_129S1SvImJ_G0032379.1 mouse_genomes_project 7 80614735 80624362 + MGP_129S1SvImJ_P0084469 Mrps11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084470.1 MGP_129S1SvImJ_G0032379.1 mouse_genomes_project 7 80614749 80622303 + Mrps11 protein_coding retained_intron MGP_129S1SvImJ_T0084471.1 MGP_129S1SvImJ_G0032379.1 mouse_genomes_project 7 80614750 80620685 + Mrps11 protein_coding retained_intron MGP_129S1SvImJ_T0085526.1 MGP_129S1SvImJ_G0032693.1 mouse_genomes_project 7 107195855 107196821 + MGP_129S1SvImJ_P0085526 Olfr635 protein_coding protein_coding MGP_129S1SvImJ_T0102782.1 MGP_129S1SvImJ_G0040614.1 mouse_genomes_project 7 87877725 87879956 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0086068.1 MGP_129S1SvImJ_G0032894.1 mouse_genomes_project 7 121913303 121925091 - MGP_129S1SvImJ_P0086068 Rps15a protein_coding protein_coding MGP_129S1SvImJ_T0086069.1 MGP_129S1SvImJ_G0032894.1 mouse_genomes_project 7 121913309 121924165 - MGP_129S1SvImJ_P0086069 Rps15a protein_coding protein_coding MGP_129S1SvImJ_T0086070.1 MGP_129S1SvImJ_G0032894.1 mouse_genomes_project 7 121917976 121924580 - MGP_129S1SvImJ_P0086070 Rps15a protein_coding protein_coding MGP_129S1SvImJ_T0086071.1 MGP_129S1SvImJ_G0032894.1 mouse_genomes_project 7 121918081 121924463 - MGP_129S1SvImJ_P0086071 Rps15a protein_coding protein_coding MGP_129S1SvImJ_T0086072.1 MGP_129S1SvImJ_G0032894.1 mouse_genomes_project 7 121918575 121924137 - Rps15a protein_coding retained_intron MGP_129S1SvImJ_T0086073.1 MGP_129S1SvImJ_G0032894.1 mouse_genomes_project 7 121918910 121925032 - MGP_129S1SvImJ_P0086073 Rps15a protein_coding protein_coding MGP_129S1SvImJ_T0086074.1 MGP_129S1SvImJ_G0032894.1 mouse_genomes_project 7 121923693 121925031 - MGP_129S1SvImJ_P0086074 Rps15a protein_coding protein_coding MGP_129S1SvImJ_T0086660.1 MGP_129S1SvImJ_G0033010.1 mouse_genomes_project 7 131262260 131282285 + MGP_129S1SvImJ_P0086660 Sez6l2 protein_coding protein_coding MGP_129S1SvImJ_T0086661.1 MGP_129S1SvImJ_G0033010.1 mouse_genomes_project 7 131262281 131269851 + MGP_129S1SvImJ_P0086661 Sez6l2 protein_coding protein_coding MGP_129S1SvImJ_T0086662.1 MGP_129S1SvImJ_G0033010.1 mouse_genomes_project 7 131262426 131282275 + MGP_129S1SvImJ_P0086662 Sez6l2 protein_coding protein_coding MGP_129S1SvImJ_T0086663.1 MGP_129S1SvImJ_G0033010.1 mouse_genomes_project 7 131262663 131281949 + MGP_129S1SvImJ_P0086663 Sez6l2 protein_coding protein_coding MGP_129S1SvImJ_T0086664.1 MGP_129S1SvImJ_G0033010.1 mouse_genomes_project 7 131265536 131271017 + MGP_129S1SvImJ_P0086664 Sez6l2 protein_coding protein_coding MGP_129S1SvImJ_T0086665.1 MGP_129S1SvImJ_G0033010.1 mouse_genomes_project 7 131279421 131281949 + Sez6l2 protein_coding retained_intron MGP_129S1SvImJ_T0086666.1 MGP_129S1SvImJ_G0033010.1 mouse_genomes_project 7 131279647 131282283 + MGP_129S1SvImJ_P0086666 Sez6l2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084385.1 MGP_129S1SvImJ_G0032365.1 mouse_genomes_project 7 71780134 71788757 - MGP_129S1SvImJ_P0084385 Nr2f2 protein_coding protein_coding MGP_129S1SvImJ_T0084386.1 MGP_129S1SvImJ_G0032365.1 mouse_genomes_project 7 71782598 71797100 - MGP_129S1SvImJ_P0084386 Nr2f2 protein_coding protein_coding MGP_129S1SvImJ_T0009044.1 MGP_129S1SvImJ_G0007279.1 mouse_genomes_project 7 132919954 132931434 - Gm45018 lincRNA lincRNA MGP_129S1SvImJ_T0008838.1 MGP_129S1SvImJ_G0007142.1 mouse_genomes_project 7 33825390 33837147 + lincRNA lincRNA MGP_129S1SvImJ_T0008839.1 MGP_129S1SvImJ_G0007142.1 mouse_genomes_project 7 33828049 33885194 + lincRNA lincRNA MGP_129S1SvImJ_T0015807.1 MGP_129S1SvImJ_G0013896.1 mouse_genomes_project 7 44416837 44417765 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015745.1 MGP_129S1SvImJ_G0013834.1 mouse_genomes_project 7 22332240 22332549 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102774.1 MGP_129S1SvImJ_G0040606.1 mouse_genomes_project 7 87270975 87271361 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0084864.1 MGP_129S1SvImJ_G0032468.1 mouse_genomes_project 7 88379870 88405397 - MGP_129S1SvImJ_P0084864 Vmn2r75 protein_coding protein_coding MGP_129S1SvImJ_T0081392.1 MGP_129S1SvImJ_G0031555.1 mouse_genomes_project 7 1613661 1643612 + MGP_129S1SvImJ_P0081392 Brsk1 protein_coding protein_coding MGP_129S1SvImJ_T0081393.1 MGP_129S1SvImJ_G0031555.1 mouse_genomes_project 7 1613985 1643628 + MGP_129S1SvImJ_P0081393 Brsk1 protein_coding protein_coding MGP_129S1SvImJ_T0081394.1 MGP_129S1SvImJ_G0031555.1 mouse_genomes_project 7 1614137 1631237 + MGP_129S1SvImJ_P0081394 Brsk1 protein_coding protein_coding MGP_129S1SvImJ_T0081395.1 MGP_129S1SvImJ_G0031555.1 mouse_genomes_project 7 1615287 1631237 + MGP_129S1SvImJ_P0081395 Brsk1 protein_coding protein_coding MGP_129S1SvImJ_T0081397.1 MGP_129S1SvImJ_G0031555.1 mouse_genomes_project 7 1634796 1636803 + MGP_129S1SvImJ_P0081397 Brsk1 protein_coding protein_coding MGP_129S1SvImJ_T0081325.1 MGP_129S1SvImJ_G0031545.1 mouse_genomes_project 7 1373921 1382451 + MGP_129S1SvImJ_P0081325 Eps8l1 protein_coding protein_coding MGP_129S1SvImJ_T0081326.1 MGP_129S1SvImJ_G0031545.1 mouse_genomes_project 7 1373921 1383194 + MGP_129S1SvImJ_P0081326 Eps8l1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081327.1 MGP_129S1SvImJ_G0031545.1 mouse_genomes_project 7 1373930 1393625 + MGP_129S1SvImJ_P0081327 Eps8l1 protein_coding protein_coding MGP_129S1SvImJ_T0081328.1 MGP_129S1SvImJ_G0031545.1 mouse_genomes_project 7 1377716 1384058 + MGP_129S1SvImJ_P0081328 Eps8l1 protein_coding protein_coding MGP_129S1SvImJ_T0081329.1 MGP_129S1SvImJ_G0031545.1 mouse_genomes_project 7 1377958 1382593 + Eps8l1 protein_coding retained_intron MGP_129S1SvImJ_T0081330.1 MGP_129S1SvImJ_G0031545.1 mouse_genomes_project 7 1377965 1383403 + Eps8l1 protein_coding retained_intron MGP_129S1SvImJ_T0081331.1 MGP_129S1SvImJ_G0031545.1 mouse_genomes_project 7 1377965 1393463 + MGP_129S1SvImJ_P0081331 Eps8l1 protein_coding protein_coding MGP_129S1SvImJ_T0081332.1 MGP_129S1SvImJ_G0031545.1 mouse_genomes_project 7 1377992 1383266 + MGP_129S1SvImJ_P0081332 Eps8l1 protein_coding protein_coding MGP_129S1SvImJ_T0081333.1 MGP_129S1SvImJ_G0031545.1 mouse_genomes_project 7 1378072 1394708 + MGP_129S1SvImJ_P0081333 Eps8l1 protein_coding protein_coding MGP_129S1SvImJ_T0081334.1 MGP_129S1SvImJ_G0031545.1 mouse_genomes_project 7 1378084 1393461 + MGP_129S1SvImJ_P0081334 Eps8l1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081335.1 MGP_129S1SvImJ_G0031545.1 mouse_genomes_project 7 1378092 1383143 + MGP_129S1SvImJ_P0081335 Eps8l1 protein_coding protein_coding MGP_129S1SvImJ_T0081336.1 MGP_129S1SvImJ_G0031545.1 mouse_genomes_project 7 1387149 1387803 + Eps8l1 protein_coding processed_transcript MGP_129S1SvImJ_T0081337.1 MGP_129S1SvImJ_G0031545.1 mouse_genomes_project 7 1391648 1392191 + Eps8l1 protein_coding processed_transcript MGP_129S1SvImJ_T0081338.1 MGP_129S1SvImJ_G0031545.1 mouse_genomes_project 7 1391886 1393465 + MGP_129S1SvImJ_P0081338 Eps8l1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085974.1 MGP_129S1SvImJ_G0032878.1 mouse_genomes_project 7 117419644 117705364 + MGP_129S1SvImJ_P0085974 Spon1 protein_coding protein_coding MGP_129S1SvImJ_T0085975.1 MGP_129S1SvImJ_G0032878.1 mouse_genomes_project 7 117419820 117594176 + MGP_129S1SvImJ_P0085975 Spon1 protein_coding protein_coding MGP_129S1SvImJ_T0085360.1 MGP_129S1SvImJ_G0032593.1 mouse_genomes_project 7 104921856 104946121 + MGP_129S1SvImJ_P0085360 Lamtor1 protein_coding protein_coding MGP_129S1SvImJ_T0085361.1 MGP_129S1SvImJ_G0032593.1 mouse_genomes_project 7 104921877 104927244 + MGP_129S1SvImJ_P0085361 Lamtor1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0086061.1 MGP_129S1SvImJ_G0032892.1 mouse_genomes_project 7 120251793 120286493 + MGP_129S1SvImJ_P0086061 Nucb2 protein_coding protein_coding MGP_129S1SvImJ_T0086062.1 MGP_129S1SvImJ_G0032892.1 mouse_genomes_project 7 120251808 120256979 + Nucb2 protein_coding processed_transcript MGP_129S1SvImJ_T0086063.1 MGP_129S1SvImJ_G0032892.1 mouse_genomes_project 7 120251839 120286352 + MGP_129S1SvImJ_P0086063 Nucb2 protein_coding protein_coding MGP_129S1SvImJ_T0086064.1 MGP_129S1SvImJ_G0032892.1 mouse_genomes_project 7 120275507 120283015 + MGP_129S1SvImJ_P0086064 Nucb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086138.1 MGP_129S1SvImJ_G0032908.1 mouse_genomes_project 7 123033163 123075156 - MGP_129S1SvImJ_P0086138 Gpr139 protein_coding protein_coding MGP_129S1SvImJ_T0083639.1 MGP_129S1SvImJ_G0032177.1 mouse_genomes_project 7 44947409 44982063 + MGP_129S1SvImJ_P0083639 Vrk3 protein_coding protein_coding MGP_129S1SvImJ_T0083640.1 MGP_129S1SvImJ_G0032177.1 mouse_genomes_project 7 44947481 44957102 + Vrk3 protein_coding retained_intron MGP_129S1SvImJ_T0083641.1 MGP_129S1SvImJ_G0032177.1 mouse_genomes_project 7 44947580 44958766 + MGP_129S1SvImJ_P0083641 Vrk3 protein_coding protein_coding MGP_129S1SvImJ_T0083642.1 MGP_129S1SvImJ_G0032177.1 mouse_genomes_project 7 44947632 44982063 + MGP_129S1SvImJ_P0083642 Vrk3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083643.1 MGP_129S1SvImJ_G0032177.1 mouse_genomes_project 7 44947642 44962052 + MGP_129S1SvImJ_P0083643 Vrk3 protein_coding protein_coding MGP_129S1SvImJ_T0083644.1 MGP_129S1SvImJ_G0032177.1 mouse_genomes_project 7 44947643 44963800 + MGP_129S1SvImJ_P0083644 Vrk3 protein_coding protein_coding MGP_129S1SvImJ_T0083645.1 MGP_129S1SvImJ_G0032177.1 mouse_genomes_project 7 44947939 44952953 + MGP_129S1SvImJ_P0083645 Vrk3 protein_coding protein_coding MGP_129S1SvImJ_T0083646.1 MGP_129S1SvImJ_G0032177.1 mouse_genomes_project 7 44951109 44958404 + Vrk3 protein_coding processed_transcript MGP_129S1SvImJ_T0083647.1 MGP_129S1SvImJ_G0032177.1 mouse_genomes_project 7 44951111 44958404 + Vrk3 protein_coding processed_transcript MGP_129S1SvImJ_T0081802.1 MGP_129S1SvImJ_G0031717.1 mouse_genomes_project 7 14559665 14567130 - MGP_129S1SvImJ_P0081802 Fkrp protein_coding protein_coding MGP_129S1SvImJ_T0081803.1 MGP_129S1SvImJ_G0031717.1 mouse_genomes_project 7 14562022 14565918 - MGP_129S1SvImJ_P0081803 Fkrp protein_coding protein_coding MGP_129S1SvImJ_T0081804.1 MGP_129S1SvImJ_G0031717.1 mouse_genomes_project 7 14563530 14566090 - Fkrp protein_coding retained_intron MGP_129S1SvImJ_T0081805.1 MGP_129S1SvImJ_G0031717.1 mouse_genomes_project 7 14565144 14567130 - Fkrp protein_coding retained_intron MGP_129S1SvImJ_T0085976.1 MGP_129S1SvImJ_G0032879.1 mouse_genomes_project 7 117708783 117781185 - MGP_129S1SvImJ_P0085976 Rras2 protein_coding protein_coding MGP_129S1SvImJ_T0081168.1 MGP_129S1SvImJ_G0031514.1 mouse_genomes_project 7 95174 128658 - MGP_129S1SvImJ_P0081168 Nlrp12 protein_coding protein_coding MGP_129S1SvImJ_T0081169.1 MGP_129S1SvImJ_G0031514.1 mouse_genomes_project 7 118517 128785 - Nlrp12 protein_coding retained_intron MGP_129S1SvImJ_T0086158.1 MGP_129S1SvImJ_G0032917.1 mouse_genomes_project 7 123691709 123716339 + MGP_129S1SvImJ_P0086158 Acsm3 protein_coding protein_coding MGP_129S1SvImJ_T0086159.1 MGP_129S1SvImJ_G0032917.1 mouse_genomes_project 7 123691709 123716343 + MGP_129S1SvImJ_P0086159 Acsm3 protein_coding protein_coding MGP_129S1SvImJ_T0086160.1 MGP_129S1SvImJ_G0032917.1 mouse_genomes_project 7 123691710 123716341 + MGP_129S1SvImJ_P0086160 Acsm3 protein_coding protein_coding MGP_129S1SvImJ_T0086161.1 MGP_129S1SvImJ_G0032917.1 mouse_genomes_project 7 123691710 123718963 + MGP_129S1SvImJ_P0086161 Acsm3 protein_coding protein_coding MGP_129S1SvImJ_T0086162.1 MGP_129S1SvImJ_G0032917.1 mouse_genomes_project 7 123697808 123716346 + MGP_129S1SvImJ_P0086162 Acsm3 protein_coding protein_coding MGP_129S1SvImJ_T0086163.1 MGP_129S1SvImJ_G0032917.1 mouse_genomes_project 7 123705981 123710623 + Acsm3 protein_coding retained_intron MGP_129S1SvImJ_T0086164.1 MGP_129S1SvImJ_G0032917.1 mouse_genomes_project 7 123708495 123712463 + Acsm3 protein_coding retained_intron MGP_129S1SvImJ_T0086165.1 MGP_129S1SvImJ_G0032917.1 mouse_genomes_project 7 123712185 123712504 + Acsm3 protein_coding retained_intron MGP_129S1SvImJ_T0098631.1 MGP_129S1SvImJ_G0036716.1 mouse_genomes_project 7 14185040 14185160 + n-R5s151 rRNA rRNA MGP_129S1SvImJ_T0086885.1 MGP_129S1SvImJ_G0033056.1 mouse_genomes_project 7 132178442 132199265 - MGP_129S1SvImJ_P0086885 Stx1b protein_coding protein_coding MGP_129S1SvImJ_T0086886.1 MGP_129S1SvImJ_G0033056.1 mouse_genomes_project 7 132181914 132185467 - MGP_129S1SvImJ_P0086886 Stx1b protein_coding protein_coding MGP_129S1SvImJ_T0082337.1 MGP_129S1SvImJ_G0031870.1 mouse_genomes_project 7 24119872 24126010 + MGP_129S1SvImJ_P0082337 Atp5sl protein_coding protein_coding MGP_129S1SvImJ_T0082338.1 MGP_129S1SvImJ_G0031870.1 mouse_genomes_project 7 24119882 24120998 + Atp5sl protein_coding retained_intron MGP_129S1SvImJ_T0082339.1 MGP_129S1SvImJ_G0031870.1 mouse_genomes_project 7 24119951 24126007 + MGP_129S1SvImJ_P0082339 Atp5sl protein_coding protein_coding MGP_129S1SvImJ_T0082340.1 MGP_129S1SvImJ_G0031870.1 mouse_genomes_project 7 24120995 24122865 + Atp5sl protein_coding retained_intron MGP_129S1SvImJ_T0082341.1 MGP_129S1SvImJ_G0031870.1 mouse_genomes_project 7 24121354 24124541 + MGP_129S1SvImJ_P0082341 Atp5sl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082342.1 MGP_129S1SvImJ_G0031870.1 mouse_genomes_project 7 24121361 24122462 + Atp5sl protein_coding processed_transcript MGP_129S1SvImJ_T0010890.1 MGP_129S1SvImJ_G0009006.1 mouse_genomes_project 7 45410140 45410199 + Mir7055 miRNA miRNA MGP_129S1SvImJ_T0083797.1 MGP_129S1SvImJ_G0032218.1 mouse_genomes_project 7 45660925 45666355 + MGP_129S1SvImJ_P0083797 Kcna7 protein_coding protein_coding MGP_129S1SvImJ_T0086745.1 MGP_129S1SvImJ_G0033027.1 mouse_genomes_project 7 131568584 131573703 + MGP_129S1SvImJ_P0086745 Zfp553 protein_coding protein_coding MGP_129S1SvImJ_T0086746.1 MGP_129S1SvImJ_G0033027.1 mouse_genomes_project 7 131568778 131573567 + MGP_129S1SvImJ_P0086746 Zfp553 protein_coding protein_coding MGP_129S1SvImJ_T0086747.1 MGP_129S1SvImJ_G0033027.1 mouse_genomes_project 7 131568817 131569644 + Zfp553 protein_coding retained_intron MGP_129S1SvImJ_T0002331.1 MGP_129S1SvImJ_G0002242.1 mouse_genomes_project 7 131501454 131502701 - TEC TEC MGP_129S1SvImJ_T0081999.1 MGP_129S1SvImJ_G0031775.1 mouse_genomes_project 7 17392312 17401604 - MGP_129S1SvImJ_P0081999 Klc3 protein_coding protein_coding MGP_129S1SvImJ_T0082000.1 MGP_129S1SvImJ_G0031775.1 mouse_genomes_project 7 17392315 17397412 - MGP_129S1SvImJ_P0082000 Klc3 protein_coding protein_coding MGP_129S1SvImJ_T0082001.1 MGP_129S1SvImJ_G0031775.1 mouse_genomes_project 7 17392315 17397369 - MGP_129S1SvImJ_P0082001 Klc3 protein_coding protein_coding MGP_129S1SvImJ_T0082002.1 MGP_129S1SvImJ_G0031775.1 mouse_genomes_project 7 17392376 17393858 - Klc3 protein_coding retained_intron MGP_129S1SvImJ_T0082003.1 MGP_129S1SvImJ_G0031775.1 mouse_genomes_project 7 17392439 17397039 - MGP_129S1SvImJ_P0082003 Klc3 protein_coding protein_coding MGP_129S1SvImJ_T0082004.1 MGP_129S1SvImJ_G0031775.1 mouse_genomes_project 7 17393229 17394452 - Klc3 protein_coding retained_intron MGP_129S1SvImJ_T0082005.1 MGP_129S1SvImJ_G0031775.1 mouse_genomes_project 7 17393588 17401315 - MGP_129S1SvImJ_P0082005 Klc3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0087427.1 MGP_129S1SvImJ_G0033195.1 mouse_genomes_project 7 145988239 145991239 - MGP_129S1SvImJ_P0087427 Bet1l protein_coding protein_coding MGP_129S1SvImJ_T0010876.1 MGP_129S1SvImJ_G0008992.1 mouse_genomes_project 7 28844163 28844223 + Mir7668 miRNA miRNA MGP_129S1SvImJ_T0083858.1 MGP_129S1SvImJ_G0032233.1 mouse_genomes_project 7 45917549 45920795 + MGP_129S1SvImJ_P0083858 Fut1 protein_coding protein_coding MGP_129S1SvImJ_T0087541.1 MGP_129S1SvImJ_G0033221.1 mouse_genomes_project 7 146460662 146461465 - MGP_129S1SvImJ_P0087541 Sct protein_coding protein_coding MGP_129S1SvImJ_T0087542.1 MGP_129S1SvImJ_G0033221.1 mouse_genomes_project 7 146460685 146461463 - MGP_129S1SvImJ_P0087542 Sct protein_coding protein_coding MGP_129S1SvImJ_T0083442.1 MGP_129S1SvImJ_G0032123.1 mouse_genomes_project 7 43451013 43452190 + MGP_129S1SvImJ_P0083442 Nkg7 protein_coding protein_coding MGP_129S1SvImJ_T0083443.1 MGP_129S1SvImJ_G0032123.1 mouse_genomes_project 7 43451070 43452187 + MGP_129S1SvImJ_P0083443 Nkg7 protein_coding protein_coding MGP_129S1SvImJ_T0083444.1 MGP_129S1SvImJ_G0032123.1 mouse_genomes_project 7 43451444 43452190 + Nkg7 protein_coding retained_intron MGP_129S1SvImJ_T0102747.1 MGP_129S1SvImJ_G0040579.1 mouse_genomes_project 7 44172493 44172710 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0083445.1 MGP_129S1SvImJ_G0032124.1 mouse_genomes_project 7 43454722 43457275 + MGP_129S1SvImJ_P0083445 Cldnd2 protein_coding protein_coding MGP_129S1SvImJ_T0083446.1 MGP_129S1SvImJ_G0032124.1 mouse_genomes_project 7 43455516 43457240 + MGP_129S1SvImJ_P0083446 Cldnd2 protein_coding protein_coding MGP_129S1SvImJ_T0086132.1 MGP_129S1SvImJ_G0032906.1 mouse_genomes_project 7 122737163 122783749 + Iqck protein_coding retained_intron MGP_129S1SvImJ_T0086133.1 MGP_129S1SvImJ_G0032906.1 mouse_genomes_project 7 122737178 122859742 + MGP_129S1SvImJ_P0086133 Iqck protein_coding protein_coding MGP_129S1SvImJ_T0086134.1 MGP_129S1SvImJ_G0032906.1 mouse_genomes_project 7 122737178 122860274 + MGP_129S1SvImJ_P0086134 Iqck protein_coding protein_coding MGP_129S1SvImJ_T0086135.1 MGP_129S1SvImJ_G0032906.1 mouse_genomes_project 7 122737178 122859910 + MGP_129S1SvImJ_P0086135 Iqck protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086136.1 MGP_129S1SvImJ_G0032906.1 mouse_genomes_project 7 122823746 122859388 + Iqck protein_coding processed_transcript MGP_129S1SvImJ_T0083519.1 MGP_129S1SvImJ_G0032153.1 mouse_genomes_project 7 44036648 44362526 + MGP_129S1SvImJ_P0083519 Klk1b5 protein_coding protein_coding MGP_129S1SvImJ_T0015766.1 MGP_129S1SvImJ_G0013855.1 mouse_genomes_project 7 29245434 29247361 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008822.1 MGP_129S1SvImJ_G0007127.1 mouse_genomes_project 7 22997434 22999250 + Gm4598 lincRNA lincRNA MGP_129S1SvImJ_T0084554.1 MGP_129S1SvImJ_G0032393.1 mouse_genomes_project 7 81624348 81638899 - MGP_129S1SvImJ_P0084554 Plin1 protein_coding protein_coding MGP_129S1SvImJ_T0084555.1 MGP_129S1SvImJ_G0032393.1 mouse_genomes_project 7 81627274 81638283 - MGP_129S1SvImJ_P0084555 Plin1 protein_coding protein_coding MGP_129S1SvImJ_T0084556.1 MGP_129S1SvImJ_G0032393.1 mouse_genomes_project 7 81627274 81638888 - MGP_129S1SvImJ_P0084556 Plin1 protein_coding protein_coding MGP_129S1SvImJ_T0084557.1 MGP_129S1SvImJ_G0032393.1 mouse_genomes_project 7 81628491 81629399 - MGP_129S1SvImJ_P0084557 Plin1 protein_coding protein_coding MGP_129S1SvImJ_T0084558.1 MGP_129S1SvImJ_G0032393.1 mouse_genomes_project 7 81631200 81635977 - MGP_129S1SvImJ_P0084558 Plin1 protein_coding protein_coding MGP_129S1SvImJ_T0084559.1 MGP_129S1SvImJ_G0032393.1 mouse_genomes_project 7 81632621 81638947 - MGP_129S1SvImJ_P0084559 Plin1 protein_coding protein_coding MGP_129S1SvImJ_T0084560.1 MGP_129S1SvImJ_G0032393.1 mouse_genomes_project 7 81635094 81639015 - MGP_129S1SvImJ_P0084560 Plin1 protein_coding protein_coding MGP_129S1SvImJ_T0084900.1 MGP_129S1SvImJ_G0032492.1 mouse_genomes_project 7 90653719 90688250 + MGP_129S1SvImJ_P0084900 Ctsc protein_coding protein_coding MGP_129S1SvImJ_T0084901.1 MGP_129S1SvImJ_G0032492.1 mouse_genomes_project 7 90653768 90685383 + MGP_129S1SvImJ_P0084901 Ctsc protein_coding protein_coding MGP_129S1SvImJ_T0084902.1 MGP_129S1SvImJ_G0032492.1 mouse_genomes_project 7 90653772 90658820 + Ctsc protein_coding retained_intron MGP_129S1SvImJ_T0084903.1 MGP_129S1SvImJ_G0032492.1 mouse_genomes_project 7 90653772 90668428 + Ctsc protein_coding retained_intron MGP_129S1SvImJ_T0084904.1 MGP_129S1SvImJ_G0032492.1 mouse_genomes_project 7 90653837 90668427 + MGP_129S1SvImJ_P0084904 Ctsc protein_coding unknown_likely_coding MGP_129S1SvImJ_T0084905.1 MGP_129S1SvImJ_G0032492.1 mouse_genomes_project 7 90673895 90679668 + Ctsc protein_coding retained_intron MGP_129S1SvImJ_T0082085.1 MGP_129S1SvImJ_G0031800.1 mouse_genomes_project 7 17934850 17948728 - MGP_129S1SvImJ_P0082085 Ceacam19 protein_coding protein_coding MGP_129S1SvImJ_T0100076.1 MGP_129S1SvImJ_G0038143.1 mouse_genomes_project 7 107489231 107489331 - Gm27995 snRNA snRNA MGP_129S1SvImJ_T0083989.1 MGP_129S1SvImJ_G0032271.1 mouse_genomes_project 7 47134122 47138776 - MGP_129S1SvImJ_P0083989 Saa1 protein_coding protein_coding MGP_129S1SvImJ_T0010922.1 MGP_129S1SvImJ_G0009038.1 mouse_genomes_project 7 80725418 80725515 + Mir7-2 miRNA miRNA MGP_129S1SvImJ_T0098381.1 MGP_129S1SvImJ_G0036466.1 mouse_genomes_project 7 95640544 95642376 + pseudogene pseudogene MGP_129S1SvImJ_T0082833.1 MGP_129S1SvImJ_G0031996.1 mouse_genomes_project 7 28987763 28994175 - MGP_129S1SvImJ_P0082833 Zfp14 protein_coding protein_coding MGP_129S1SvImJ_T0086989.1 MGP_129S1SvImJ_G0033080.1 mouse_genomes_project 7 132681962 132683021 + Slc5a2 protein_coding retained_intron MGP_129S1SvImJ_T0086990.1 MGP_129S1SvImJ_G0033080.1 mouse_genomes_project 7 132681981 132688660 + MGP_129S1SvImJ_P0086990 Slc5a2 protein_coding protein_coding MGP_129S1SvImJ_T0086991.1 MGP_129S1SvImJ_G0033080.1 mouse_genomes_project 7 132681983 132688450 + MGP_129S1SvImJ_P0086991 Slc5a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086992.1 MGP_129S1SvImJ_G0033080.1 mouse_genomes_project 7 132681988 132685518 + MGP_129S1SvImJ_P0086992 Slc5a2 protein_coding protein_coding MGP_129S1SvImJ_T0086993.1 MGP_129S1SvImJ_G0033080.1 mouse_genomes_project 7 132682000 132685522 + MGP_129S1SvImJ_P0086993 Slc5a2 protein_coding protein_coding MGP_129S1SvImJ_T0086994.1 MGP_129S1SvImJ_G0033080.1 mouse_genomes_project 7 132682603 132686257 + MGP_129S1SvImJ_P0086994 Slc5a2 protein_coding protein_coding MGP_129S1SvImJ_T0086995.1 MGP_129S1SvImJ_G0033080.1 mouse_genomes_project 7 132682646 132683778 + MGP_129S1SvImJ_P0086995 Slc5a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086996.1 MGP_129S1SvImJ_G0033080.1 mouse_genomes_project 7 132682673 132683078 + Slc5a2 protein_coding retained_intron MGP_129S1SvImJ_T0086997.1 MGP_129S1SvImJ_G0033080.1 mouse_genomes_project 7 132683261 132685371 + Slc5a2 protein_coding retained_intron MGP_129S1SvImJ_T0086998.1 MGP_129S1SvImJ_G0033080.1 mouse_genomes_project 7 132683690 132686180 + MGP_129S1SvImJ_P0086998 Slc5a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086999.1 MGP_129S1SvImJ_G0033080.1 mouse_genomes_project 7 132685331 132688417 + MGP_129S1SvImJ_P0086999 Slc5a2 protein_coding protein_coding MGP_129S1SvImJ_T0087000.1 MGP_129S1SvImJ_G0033080.1 mouse_genomes_project 7 132686771 132688417 + MGP_129S1SvImJ_P0087000 Slc5a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081165.1 MGP_129S1SvImJ_G0031513.1 mouse_genomes_project 7 18722 30342 - AU018091 protein_coding processed_transcript MGP_129S1SvImJ_T0081166.1 MGP_129S1SvImJ_G0031513.1 mouse_genomes_project 7 18722 38007 - MGP_129S1SvImJ_P0081166 AU018091 protein_coding protein_coding MGP_129S1SvImJ_T0081167.1 MGP_129S1SvImJ_G0031513.1 mouse_genomes_project 7 28257 37912 - MGP_129S1SvImJ_P0081167 AU018091 protein_coding protein_coding MGP_129S1SvImJ_T0010865.1 MGP_129S1SvImJ_G0008981.1 mouse_genomes_project 7 23406946 23407010 - Mir7047 miRNA miRNA MGP_129S1SvImJ_T0102678.1 MGP_129S1SvImJ_G0040511.1 mouse_genomes_project 7 9277715 9278680 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0008843.1 MGP_129S1SvImJ_G0007146.1 mouse_genomes_project 7 34436125 34442026 + Gm45097 lincRNA lincRNA MGP_129S1SvImJ_T0005303.1 MGP_129S1SvImJ_G0004500.1 mouse_genomes_project 7 125746956 125747895 + 1700069B07Rik antisense antisense MGP_129S1SvImJ_T0005304.1 MGP_129S1SvImJ_G0004500.1 mouse_genomes_project 7 125747070 125747893 + 1700069B07Rik antisense antisense MGP_129S1SvImJ_T0083511.1 MGP_129S1SvImJ_G0032147.1 mouse_genomes_project 7 43933022 43937667 + MGP_129S1SvImJ_P0083511 Klk4 protein_coding protein_coding MGP_129S1SvImJ_T0082843.1 MGP_129S1SvImJ_G0032000.1 mouse_genomes_project 7 29057920 29067555 + Zfp260 protein_coding processed_transcript MGP_129S1SvImJ_T0082844.1 MGP_129S1SvImJ_G0032000.1 mouse_genomes_project 7 29057937 29070886 + MGP_129S1SvImJ_P0082844 Zfp260 protein_coding protein_coding MGP_129S1SvImJ_T0082845.1 MGP_129S1SvImJ_G0032000.1 mouse_genomes_project 7 29058305 29063382 + Zfp260 protein_coding retained_intron MGP_129S1SvImJ_T0082846.1 MGP_129S1SvImJ_G0032000.1 mouse_genomes_project 7 29058312 29068023 + MGP_129S1SvImJ_P0082846 Zfp260 protein_coding protein_coding MGP_129S1SvImJ_T0082847.1 MGP_129S1SvImJ_G0032000.1 mouse_genomes_project 7 29058321 29070883 + Zfp260 protein_coding processed_transcript MGP_129S1SvImJ_T0082848.1 MGP_129S1SvImJ_G0032000.1 mouse_genomes_project 7 29058328 29070878 + MGP_129S1SvImJ_P0082848 Zfp260 protein_coding protein_coding MGP_129S1SvImJ_T0082849.1 MGP_129S1SvImJ_G0032000.1 mouse_genomes_project 7 29061432 29063365 + Zfp260 protein_coding retained_intron MGP_129S1SvImJ_T0084863.1 MGP_129S1SvImJ_G0032467.1 mouse_genomes_project 7 88156848 88171214 - MGP_129S1SvImJ_P0084863 protein_coding protein_coding MGP_129S1SvImJ_T0100096.1 MGP_129S1SvImJ_G0038163.1 mouse_genomes_project 7 134533961 134534071 + Gm23847 snRNA snRNA MGP_129S1SvImJ_T0015712.1 MGP_129S1SvImJ_G0013801.1 mouse_genomes_project 7 3059404 3059851 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015717.1 MGP_129S1SvImJ_G0013806.1 mouse_genomes_project 7 9979591 9981038 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010925.1 MGP_129S1SvImJ_G0009041.1 mouse_genomes_project 7 83595555 83595628 + Mir1839 miRNA miRNA MGP_129S1SvImJ_T0081522.1 MGP_129S1SvImJ_G0031603.1 mouse_genomes_project 7 3486159 3525586 + MGP_129S1SvImJ_P0081522 Smim17 protein_coding protein_coding MGP_129S1SvImJ_T0081523.1 MGP_129S1SvImJ_G0031603.1 mouse_genomes_project 7 3486192 3500102 + Smim17 protein_coding processed_transcript MGP_129S1SvImJ_T0081525.1 MGP_129S1SvImJ_G0031603.1 mouse_genomes_project 7 3509731 3528229 + MGP_129S1SvImJ_P0081525 Smim17 protein_coding protein_coding MGP_129S1SvImJ_T0010910.1 MGP_129S1SvImJ_G0009026.1 mouse_genomes_project 7 62935366 62935461 - Mir344 miRNA miRNA MGP_129S1SvImJ_T0083509.1 MGP_129S1SvImJ_G0032146.1 mouse_genomes_project 7 43893889 43897214 + MGP_129S1SvImJ_P0083509 Klk5 protein_coding protein_coding MGP_129S1SvImJ_T0083510.1 MGP_129S1SvImJ_G0032146.1 mouse_genomes_project 7 43894187 43903325 + MGP_129S1SvImJ_P0083510 Klk5 protein_coding protein_coding MGP_129S1SvImJ_T0085495.1 MGP_129S1SvImJ_G0032664.1 mouse_genomes_project 7 106662446 106663418 - MGP_129S1SvImJ_P0085495 Olfr612 protein_coding protein_coding MGP_129S1SvImJ_T0087419.1 MGP_129S1SvImJ_G0033192.1 mouse_genomes_project 7 145969862 145972732 + MGP_129S1SvImJ_P0087419 Urah protein_coding protein_coding MGP_129S1SvImJ_T0087420.1 MGP_129S1SvImJ_G0033192.1 mouse_genomes_project 7 145970123 145972811 + MGP_129S1SvImJ_P0087420 Urah protein_coding protein_coding MGP_129S1SvImJ_T0087421.1 MGP_129S1SvImJ_G0033192.1 mouse_genomes_project 7 145970141 145972816 + MGP_129S1SvImJ_P0087421 Urah protein_coding protein_coding MGP_129S1SvImJ_T0087422.1 MGP_129S1SvImJ_G0033192.1 mouse_genomes_project 7 145970178 145971913 + Urah protein_coding retained_intron MGP_129S1SvImJ_T0005288.1 MGP_129S1SvImJ_G0004490.1 mouse_genomes_project 7 114132867 114145934 - Gm28863 antisense antisense MGP_129S1SvImJ_T0087127.1 MGP_129S1SvImJ_G0033103.1 mouse_genomes_project 7 135999394 136014427 + MGP_129S1SvImJ_P0087127 Pstk protein_coding protein_coding MGP_129S1SvImJ_T0087128.1 MGP_129S1SvImJ_G0033103.1 mouse_genomes_project 7 135999399 136014424 + MGP_129S1SvImJ_P0087128 Pstk protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087129.1 MGP_129S1SvImJ_G0033103.1 mouse_genomes_project 7 135999410 136002517 + Pstk protein_coding processed_transcript MGP_129S1SvImJ_T0087130.1 MGP_129S1SvImJ_G0033103.1 mouse_genomes_project 7 136001288 136014421 + Pstk protein_coding retained_intron MGP_129S1SvImJ_T0087131.1 MGP_129S1SvImJ_G0033103.1 mouse_genomes_project 7 136010512 136014424 + Pstk protein_coding processed_transcript MGP_129S1SvImJ_T0087132.1 MGP_129S1SvImJ_G0033103.1 mouse_genomes_project 7 136010844 136014315 + Pstk protein_coding retained_intron MGP_129S1SvImJ_T0087133.1 MGP_129S1SvImJ_G0033103.1 mouse_genomes_project 7 136011085 136014420 + Pstk protein_coding processed_transcript MGP_129S1SvImJ_T0010958.1 MGP_129S1SvImJ_G0009074.1 mouse_genomes_project 7 147921006 147921079 - Mir483 miRNA miRNA MGP_129S1SvImJ_T0085532.1 MGP_129S1SvImJ_G0032699.1 mouse_genomes_project 7 107291059 107292004 - MGP_129S1SvImJ_P0085532 protein_coding protein_coding MGP_129S1SvImJ_T0087392.1 MGP_129S1SvImJ_G0033169.1 mouse_genomes_project 7 145272403 145273459 + MGP_129S1SvImJ_P0087392 Olfr523 protein_coding protein_coding MGP_129S1SvImJ_T0002327.1 MGP_129S1SvImJ_G0002238.1 mouse_genomes_project 7 129523899 129525059 + TEC TEC MGP_129S1SvImJ_T0015864.1 MGP_129S1SvImJ_G0013953.1 mouse_genomes_project 7 88551200 88551450 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005185.1 MGP_129S1SvImJ_G0004418.1 mouse_genomes_project 7 22389369 22393469 - Gm44793 antisense antisense MGP_129S1SvImJ_T0010919.1 MGP_129S1SvImJ_G0009035.1 mouse_genomes_project 7 67609317 67609375 - Mir7057 miRNA miRNA MGP_129S1SvImJ_T0008878.1 MGP_129S1SvImJ_G0007172.1 mouse_genomes_project 7 44658088 44658967 + Gm45123 lincRNA lincRNA MGP_129S1SvImJ_T0085597.1 MGP_129S1SvImJ_G0032735.1 mouse_genomes_project 7 108230015 108230612 - MGP_129S1SvImJ_P0085597 protein_coding protein_coding MGP_129S1SvImJ_T0082098.1 MGP_129S1SvImJ_G0031808.1 mouse_genomes_project 7 21876478 21881924 + MGP_129S1SvImJ_P0082098 Vmn1r174 protein_coding protein_coding MGP_129S1SvImJ_T0085530.1 MGP_129S1SvImJ_G0032697.1 mouse_genomes_project 7 107271487 107272432 - MGP_129S1SvImJ_P0085530 Olfr642 protein_coding protein_coding MGP_129S1SvImJ_T0102694.1 MGP_129S1SvImJ_G0040527.1 mouse_genomes_project 7 10755119 10780006 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0100067.1 MGP_129S1SvImJ_G0038134.1 mouse_genomes_project 7 83750117 83750225 + Gm26149 snRNA snRNA MGP_129S1SvImJ_T0087775.1 MGP_129S1SvImJ_G0033262.1 mouse_genomes_project 7 147947053 147948083 - MGP_129S1SvImJ_P0087775 Ins2 protein_coding protein_coding MGP_129S1SvImJ_T0087776.1 MGP_129S1SvImJ_G0033262.1 mouse_genomes_project 7 147947053 147968911 - MGP_129S1SvImJ_P0087776 Ins2 protein_coding protein_coding MGP_129S1SvImJ_T0087777.1 MGP_129S1SvImJ_G0033262.1 mouse_genomes_project 7 147947056 147948124 - MGP_129S1SvImJ_P0087777 Ins2 protein_coding protein_coding MGP_129S1SvImJ_T0087778.1 MGP_129S1SvImJ_G0033262.1 mouse_genomes_project 7 147947056 147948096 - MGP_129S1SvImJ_P0087778 Ins2 protein_coding protein_coding MGP_129S1SvImJ_T0087779.1 MGP_129S1SvImJ_G0033262.1 mouse_genomes_project 7 147947056 147948090 - MGP_129S1SvImJ_P0087779 Ins2 protein_coding protein_coding MGP_129S1SvImJ_T0087780.1 MGP_129S1SvImJ_G0033262.1 mouse_genomes_project 7 147947058 147948115 - MGP_129S1SvImJ_P0087780 Ins2 protein_coding protein_coding MGP_129S1SvImJ_T0087781.1 MGP_129S1SvImJ_G0033262.1 mouse_genomes_project 7 147947106 147947978 - MGP_129S1SvImJ_P0087781 Ins2 protein_coding protein_coding MGP_129S1SvImJ_T0087782.1 MGP_129S1SvImJ_G0033262.1 mouse_genomes_project 7 147947110 147947931 - MGP_129S1SvImJ_P0087782 Ins2 protein_coding protein_coding MGP_129S1SvImJ_T0081467.1 MGP_129S1SvImJ_G0031579.1 mouse_genomes_project 7 1992690 1996700 - MGP_129S1SvImJ_P0081467 Zfp784 protein_coding protein_coding MGP_129S1SvImJ_T0015816.1 MGP_129S1SvImJ_G0013905.1 mouse_genomes_project 7 56040973 56042779 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008891.1 MGP_129S1SvImJ_G0007182.1 mouse_genomes_project 7 66379198 66379754 - Gm45214 lincRNA lincRNA MGP_129S1SvImJ_T0008892.1 MGP_129S1SvImJ_G0007182.1 mouse_genomes_project 7 66379201 66379814 - Gm45214 lincRNA lincRNA MGP_129S1SvImJ_T0087784.1 MGP_129S1SvImJ_G0033264.1 mouse_genomes_project 7 148103264 148121259 + MGP_129S1SvImJ_P0087784 protein_coding protein_coding MGP_129S1SvImJ_T0087785.1 MGP_129S1SvImJ_G0033264.1 mouse_genomes_project 7 148117286 148120458 + protein_coding processed_transcript MGP_129S1SvImJ_T0085739.1 MGP_129S1SvImJ_G0032789.1 mouse_genomes_project 7 110454765 110455713 + MGP_129S1SvImJ_P0085739 Olfr17 protein_coding protein_coding MGP_129S1SvImJ_T0084956.1 MGP_129S1SvImJ_G0032509.1 mouse_genomes_project 7 92897880 92905644 - MGP_129S1SvImJ_P0084956 Tmem126b protein_coding protein_coding MGP_129S1SvImJ_T0084957.1 MGP_129S1SvImJ_G0032509.1 mouse_genomes_project 7 92899631 92905638 - Tmem126b protein_coding retained_intron MGP_129S1SvImJ_T0100069.1 MGP_129S1SvImJ_G0038136.1 mouse_genomes_project 7 90457214 90457278 - Gm24249 snRNA snRNA MGP_129S1SvImJ_T0082947.1 MGP_129S1SvImJ_G0032025.1 mouse_genomes_project 7 29539053 29557262 - MGP_129S1SvImJ_P0082947 Proser3 protein_coding protein_coding MGP_129S1SvImJ_T0082948.1 MGP_129S1SvImJ_G0032025.1 mouse_genomes_project 7 29539437 29553255 - MGP_129S1SvImJ_P0082948 Proser3 protein_coding protein_coding MGP_129S1SvImJ_T0082949.1 MGP_129S1SvImJ_G0032025.1 mouse_genomes_project 7 29542893 29557326 - Proser3 protein_coding retained_intron MGP_129S1SvImJ_T0082950.1 MGP_129S1SvImJ_G0032025.1 mouse_genomes_project 7 29552628 29557322 - MGP_129S1SvImJ_P0082950 Proser3 protein_coding protein_coding MGP_129S1SvImJ_T0010913.1 MGP_129S1SvImJ_G0009029.1 mouse_genomes_project 7 63117875 63117943 - Mir344f miRNA miRNA MGP_129S1SvImJ_T0005300.1 MGP_129S1SvImJ_G0004499.1 mouse_genomes_project 7 125502730 125631553 - 4933432K03Rik antisense antisense MGP_129S1SvImJ_T0005301.1 MGP_129S1SvImJ_G0004499.1 mouse_genomes_project 7 125601641 125631555 - 4933432K03Rik antisense antisense MGP_129S1SvImJ_T0005302.1 MGP_129S1SvImJ_G0004499.1 mouse_genomes_project 7 125630994 125650222 - 4933432K03Rik antisense antisense MGP_129S1SvImJ_T0081943.1 MGP_129S1SvImJ_G0031762.1 mouse_genomes_project 7 17111028 17116946 + MGP_129S1SvImJ_P0081943 Snrpd2 protein_coding protein_coding MGP_129S1SvImJ_T0081944.1 MGP_129S1SvImJ_G0031762.1 mouse_genomes_project 7 17111165 17112400 + Snrpd2 protein_coding retained_intron MGP_129S1SvImJ_T0086213.1 MGP_129S1SvImJ_G0032931.1 mouse_genomes_project 7 124642027 124653076 - MGP_129S1SvImJ_P0086213 Pdzd9 protein_coding protein_coding MGP_129S1SvImJ_T0086214.1 MGP_129S1SvImJ_G0032931.1 mouse_genomes_project 7 124642085 124652983 - Pdzd9 protein_coding processed_transcript MGP_129S1SvImJ_T0083196.1 MGP_129S1SvImJ_G0032072.1 mouse_genomes_project 7 33395946 33424578 - MGP_129S1SvImJ_P0083196 Uba2 protein_coding protein_coding MGP_129S1SvImJ_T0083197.1 MGP_129S1SvImJ_G0032072.1 mouse_genomes_project 7 33395972 33397345 - Uba2 protein_coding retained_intron MGP_129S1SvImJ_T0083198.1 MGP_129S1SvImJ_G0032072.1 mouse_genomes_project 7 33396341 33399807 - MGP_129S1SvImJ_P0083198 Uba2 protein_coding protein_coding MGP_129S1SvImJ_T0083199.1 MGP_129S1SvImJ_G0032072.1 mouse_genomes_project 7 33396648 33398528 - Uba2 protein_coding retained_intron MGP_129S1SvImJ_T0083200.1 MGP_129S1SvImJ_G0032072.1 mouse_genomes_project 7 33397687 33401521 - Uba2 protein_coding retained_intron MGP_129S1SvImJ_T0083201.1 MGP_129S1SvImJ_G0032072.1 mouse_genomes_project 7 33406235 33416364 - MGP_129S1SvImJ_P0083201 Uba2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083202.1 MGP_129S1SvImJ_G0032072.1 mouse_genomes_project 7 33409238 33412306 - Uba2 protein_coding retained_intron MGP_129S1SvImJ_T0083203.1 MGP_129S1SvImJ_G0032072.1 mouse_genomes_project 7 33409825 33420421 - MGP_129S1SvImJ_P0083203 Uba2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083204.1 MGP_129S1SvImJ_G0032072.1 mouse_genomes_project 7 33416310 33425602 - MGP_129S1SvImJ_P0083204 Uba2 protein_coding protein_coding MGP_129S1SvImJ_T0083205.1 MGP_129S1SvImJ_G0032072.1 mouse_genomes_project 7 33417644 33420344 - Uba2 protein_coding retained_intron MGP_129S1SvImJ_T0005241.1 MGP_129S1SvImJ_G0004458.1 mouse_genomes_project 7 58204793 58227453 + Gm9962 antisense antisense MGP_129S1SvImJ_T0008828.1 MGP_129S1SvImJ_G0007132.1 mouse_genomes_project 7 24334005 24339365 + Gm26707 lincRNA lincRNA MGP_129S1SvImJ_T0002344.1 MGP_129S1SvImJ_G0002255.1 mouse_genomes_project 7 148582400 148586320 + TEC TEC MGP_129S1SvImJ_T0008823.1 MGP_129S1SvImJ_G0007128.1 mouse_genomes_project 7 23367487 23372854 + Gm44970 lincRNA lincRNA MGP_129S1SvImJ_T0085057.1 MGP_129S1SvImJ_G0032530.1 mouse_genomes_project 7 100432103 100446417 - MGP_129S1SvImJ_P0085057 Aqp11 protein_coding protein_coding MGP_129S1SvImJ_T0085058.1 MGP_129S1SvImJ_G0032530.1 mouse_genomes_project 7 100434476 100446066 - MGP_129S1SvImJ_P0085058 Aqp11 protein_coding protein_coding MGP_129S1SvImJ_T0085059.1 MGP_129S1SvImJ_G0032530.1 mouse_genomes_project 7 100434644 100437488 - Aqp11 protein_coding retained_intron MGP_129S1SvImJ_T0085060.1 MGP_129S1SvImJ_G0032530.1 mouse_genomes_project 7 100435525 100441363 - Aqp11 protein_coding retained_intron MGP_129S1SvImJ_T0085061.1 MGP_129S1SvImJ_G0032530.1 mouse_genomes_project 7 100437150 100438605 - Aqp11 protein_coding processed_transcript MGP_129S1SvImJ_T0005307.1 MGP_129S1SvImJ_G0004503.1 mouse_genomes_project 7 128139724 128152393 - Gm27040 antisense antisense MGP_129S1SvImJ_T0010921.1 MGP_129S1SvImJ_G0009037.1 mouse_genomes_project 7 79809396 79809490 - Gm44358 miRNA miRNA MGP_129S1SvImJ_T0086245.1 MGP_129S1SvImJ_G0032941.1 mouse_genomes_project 7 125103973 125188118 + MGP_129S1SvImJ_P0086245 Otoa protein_coding protein_coding MGP_129S1SvImJ_T0086246.1 MGP_129S1SvImJ_G0032941.1 mouse_genomes_project 7 125104059 125121866 + MGP_129S1SvImJ_P0086246 Otoa protein_coding protein_coding MGP_129S1SvImJ_T0086247.1 MGP_129S1SvImJ_G0032941.1 mouse_genomes_project 7 125104075 125112229 + MGP_129S1SvImJ_P0086247 Otoa protein_coding protein_coding MGP_129S1SvImJ_T0086248.1 MGP_129S1SvImJ_G0032941.1 mouse_genomes_project 7 125104075 125112247 + MGP_129S1SvImJ_P0086248 Otoa protein_coding protein_coding MGP_129S1SvImJ_T0086249.1 MGP_129S1SvImJ_G0032941.1 mouse_genomes_project 7 125137596 125185849 + Otoa protein_coding retained_intron MGP_129S1SvImJ_T0086250.1 MGP_129S1SvImJ_G0032941.1 mouse_genomes_project 7 125137601 125188112 + Otoa protein_coding processed_transcript MGP_129S1SvImJ_T0086095.1 MGP_129S1SvImJ_G0032900.1 mouse_genomes_project 7 122374853 122428659 - MGP_129S1SvImJ_P0086095 Tmc7 protein_coding protein_coding MGP_129S1SvImJ_T0086096.1 MGP_129S1SvImJ_G0032900.1 mouse_genomes_project 7 122385336 122428607 - Tmc7 protein_coding retained_intron MGP_129S1SvImJ_T0086097.1 MGP_129S1SvImJ_G0032900.1 mouse_genomes_project 7 122404987 122409663 - Tmc7 protein_coding retained_intron MGP_129S1SvImJ_T0086098.1 MGP_129S1SvImJ_G0032900.1 mouse_genomes_project 7 122415450 122428632 - Tmc7 protein_coding processed_transcript MGP_129S1SvImJ_T0084290.1 MGP_129S1SvImJ_G0032347.1 mouse_genomes_project 7 67278706 67294105 + Snrpa1 protein_coding processed_transcript MGP_129S1SvImJ_T0084291.1 MGP_129S1SvImJ_G0032347.1 mouse_genomes_project 7 67280003 67289231 + Snrpa1 protein_coding processed_transcript MGP_129S1SvImJ_T0084292.1 MGP_129S1SvImJ_G0032347.1 mouse_genomes_project 7 67280042 67294349 + MGP_129S1SvImJ_P0084292 Snrpa1 protein_coding protein_coding MGP_129S1SvImJ_T0084293.1 MGP_129S1SvImJ_G0032347.1 mouse_genomes_project 7 67280236 67294138 + Snrpa1 protein_coding processed_transcript MGP_129S1SvImJ_T0084294.1 MGP_129S1SvImJ_G0032347.1 mouse_genomes_project 7 67280248 67294342 + MGP_129S1SvImJ_P0084294 Snrpa1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084295.1 MGP_129S1SvImJ_G0032347.1 mouse_genomes_project 7 67280268 67291314 + Snrpa1 protein_coding retained_intron MGP_129S1SvImJ_T0084296.1 MGP_129S1SvImJ_G0032347.1 mouse_genomes_project 7 67280307 67294132 + Snrpa1 protein_coding processed_transcript MGP_129S1SvImJ_T0084297.1 MGP_129S1SvImJ_G0032347.1 mouse_genomes_project 7 67280485 67281871 + Snrpa1 protein_coding processed_transcript MGP_129S1SvImJ_T0084298.1 MGP_129S1SvImJ_G0032347.1 mouse_genomes_project 7 67288556 67289228 + Snrpa1 protein_coding retained_intron MGP_129S1SvImJ_T0083169.1 MGP_129S1SvImJ_G0032063.1 mouse_genomes_project 7 30194926 30215799 - Gramd1a protein_coding retained_intron MGP_129S1SvImJ_T0083170.1 MGP_129S1SvImJ_G0032063.1 mouse_genomes_project 7 30194926 30215869 - MGP_129S1SvImJ_P0083170 Gramd1a protein_coding protein_coding MGP_129S1SvImJ_T0083171.1 MGP_129S1SvImJ_G0032063.1 mouse_genomes_project 7 30194926 30215799 - MGP_129S1SvImJ_P0083171 Gramd1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083172.1 MGP_129S1SvImJ_G0032063.1 mouse_genomes_project 7 30194926 30215820 - MGP_129S1SvImJ_P0083172 Gramd1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083173.1 MGP_129S1SvImJ_G0032063.1 mouse_genomes_project 7 30194926 30215801 - MGP_129S1SvImJ_P0083173 Gramd1a protein_coding protein_coding MGP_129S1SvImJ_T0083174.1 MGP_129S1SvImJ_G0032063.1 mouse_genomes_project 7 30197158 30198164 - Gramd1a protein_coding retained_intron MGP_129S1SvImJ_T0083175.1 MGP_129S1SvImJ_G0032063.1 mouse_genomes_project 7 30197390 30202955 - MGP_129S1SvImJ_P0083175 Gramd1a protein_coding protein_coding MGP_129S1SvImJ_T0083176.1 MGP_129S1SvImJ_G0032063.1 mouse_genomes_project 7 30197638 30208543 - MGP_129S1SvImJ_P0083176 Gramd1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083177.1 MGP_129S1SvImJ_G0032063.1 mouse_genomes_project 7 30200390 30204698 - MGP_129S1SvImJ_P0083177 Gramd1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083178.1 MGP_129S1SvImJ_G0032063.1 mouse_genomes_project 7 30204647 30215799 - MGP_129S1SvImJ_P0083178 Gramd1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083179.1 MGP_129S1SvImJ_G0032063.1 mouse_genomes_project 7 30205854 30215740 - Gramd1a protein_coding retained_intron MGP_129S1SvImJ_T0083180.1 MGP_129S1SvImJ_G0032063.1 mouse_genomes_project 7 30205962 30216856 - MGP_129S1SvImJ_P0083180 Gramd1a protein_coding protein_coding MGP_129S1SvImJ_T0083181.1 MGP_129S1SvImJ_G0032063.1 mouse_genomes_project 7 30207387 30220667 - MGP_129S1SvImJ_P0083181 Gramd1a protein_coding protein_coding MGP_129S1SvImJ_T0086988.1 MGP_129S1SvImJ_G0033079.1 mouse_genomes_project 7 132655868 132665283 + MGP_129S1SvImJ_P0086988 protein_coding protein_coding MGP_129S1SvImJ_T0005175.1 MGP_129S1SvImJ_G0004411.1 mouse_genomes_project 7 16928284 16929050 - Gm45058 antisense antisense MGP_129S1SvImJ_T0082557.1 MGP_129S1SvImJ_G0031922.1 mouse_genomes_project 7 26418765 26441046 + MGP_129S1SvImJ_P0082557 Zfp60 protein_coding protein_coding MGP_129S1SvImJ_T0082558.1 MGP_129S1SvImJ_G0031922.1 mouse_genomes_project 7 26418787 26429521 + Zfp60 protein_coding retained_intron MGP_129S1SvImJ_T0082559.1 MGP_129S1SvImJ_G0031922.1 mouse_genomes_project 7 26418887 26437631 + MGP_129S1SvImJ_P0082559 Zfp60 protein_coding protein_coding MGP_129S1SvImJ_T0087120.1 MGP_129S1SvImJ_G0033098.1 mouse_genomes_project 7 135778858 135864365 + MGP_129S1SvImJ_P0087120 5430419D17Rik protein_coding protein_coding MGP_129S1SvImJ_T0087121.1 MGP_129S1SvImJ_G0033098.1 mouse_genomes_project 7 135823317 135846707 + 5430419D17Rik protein_coding retained_intron MGP_129S1SvImJ_T0083105.1 MGP_129S1SvImJ_G0032055.1 mouse_genomes_project 7 30028377 30030898 + Fam187b protein_coding retained_intron MGP_129S1SvImJ_T0083106.1 MGP_129S1SvImJ_G0032055.1 mouse_genomes_project 7 30028391 30044284 + MGP_129S1SvImJ_P0083106 Fam187b protein_coding protein_coding MGP_129S1SvImJ_T0083107.1 MGP_129S1SvImJ_G0032055.1 mouse_genomes_project 7 30031610 30044290 + MGP_129S1SvImJ_P0083107 Fam187b protein_coding protein_coding MGP_129S1SvImJ_T0083108.1 MGP_129S1SvImJ_G0032055.1 mouse_genomes_project 7 30036437 30044026 + MGP_129S1SvImJ_P0083108 Fam187b protein_coding protein_coding MGP_129S1SvImJ_T0086775.1 MGP_129S1SvImJ_G0033039.1 mouse_genomes_project 7 131820969 131827356 + MGP_129S1SvImJ_P0086775 Prr14 protein_coding protein_coding MGP_129S1SvImJ_T0086776.1 MGP_129S1SvImJ_G0033039.1 mouse_genomes_project 7 131821615 131824451 + MGP_129S1SvImJ_P0086776 Prr14 protein_coding protein_coding MGP_129S1SvImJ_T0086777.1 MGP_129S1SvImJ_G0033039.1 mouse_genomes_project 7 131821625 131824314 + MGP_129S1SvImJ_P0086777 Prr14 protein_coding protein_coding MGP_129S1SvImJ_T0086778.1 MGP_129S1SvImJ_G0033039.1 mouse_genomes_project 7 131821648 131824422 + Prr14 protein_coding retained_intron MGP_129S1SvImJ_T0086779.1 MGP_129S1SvImJ_G0033039.1 mouse_genomes_project 7 131822045 131823701 + Prr14 protein_coding retained_intron MGP_129S1SvImJ_T0086780.1 MGP_129S1SvImJ_G0033039.1 mouse_genomes_project 7 131822086 131827355 + MGP_129S1SvImJ_P0086780 Prr14 protein_coding protein_coding MGP_129S1SvImJ_T0086781.1 MGP_129S1SvImJ_G0033039.1 mouse_genomes_project 7 131822497 131825809 + Prr14 protein_coding retained_intron MGP_129S1SvImJ_T0086782.1 MGP_129S1SvImJ_G0033039.1 mouse_genomes_project 7 131824219 131825867 + MGP_129S1SvImJ_P0086782 Prr14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086783.1 MGP_129S1SvImJ_G0033039.1 mouse_genomes_project 7 131826097 131827354 + Prr14 protein_coding retained_intron MGP_129S1SvImJ_T0086784.1 MGP_129S1SvImJ_G0033039.1 mouse_genomes_project 7 131826115 131827352 + MGP_129S1SvImJ_P0086784 Prr14 protein_coding protein_coding MGP_129S1SvImJ_T0100060.1 MGP_129S1SvImJ_G0038127.1 mouse_genomes_project 7 63107092 63107199 - Gm23431 snRNA snRNA MGP_129S1SvImJ_T0086809.1 MGP_129S1SvImJ_G0033043.1 mouse_genomes_project 7 131921106 131924987 + MGP_129S1SvImJ_P0086809 Tmem265 protein_coding protein_coding MGP_129S1SvImJ_T0086810.1 MGP_129S1SvImJ_G0033043.1 mouse_genomes_project 7 131921295 131926657 + MGP_129S1SvImJ_P0086810 Tmem265 protein_coding protein_coding MGP_129S1SvImJ_T0086896.1 MGP_129S1SvImJ_G0033058.1 mouse_genomes_project 7 132245265 132260030 - MGP_129S1SvImJ_P0086896 Zfp668 protein_coding protein_coding MGP_129S1SvImJ_T0086897.1 MGP_129S1SvImJ_G0033058.1 mouse_genomes_project 7 132247935 132259982 - MGP_129S1SvImJ_P0086897 Zfp668 protein_coding protein_coding MGP_129S1SvImJ_T0086898.1 MGP_129S1SvImJ_G0033058.1 mouse_genomes_project 7 132248211 132258848 - MGP_129S1SvImJ_P0086898 Zfp668 protein_coding protein_coding MGP_129S1SvImJ_T0086899.1 MGP_129S1SvImJ_G0033058.1 mouse_genomes_project 7 132248211 132259979 - MGP_129S1SvImJ_P0086899 Zfp668 protein_coding protein_coding MGP_129S1SvImJ_T0086900.1 MGP_129S1SvImJ_G0033058.1 mouse_genomes_project 7 132250259 132258859 - MGP_129S1SvImJ_P0086900 Zfp668 protein_coding protein_coding MGP_129S1SvImJ_T0086901.1 MGP_129S1SvImJ_G0033058.1 mouse_genomes_project 7 132256974 132259336 - Zfp668 protein_coding processed_transcript MGP_129S1SvImJ_T0009046.1 MGP_129S1SvImJ_G0007281.1 mouse_genomes_project 7 133233096 133374671 + Gm44671 lincRNA lincRNA MGP_129S1SvImJ_T0081897.1 MGP_129S1SvImJ_G0031750.1 mouse_genomes_project 7 16928125 16929688 + MGP_129S1SvImJ_P0081897 Nanos2 protein_coding protein_coding MGP_129S1SvImJ_T0083499.1 MGP_129S1SvImJ_G0032141.1 mouse_genomes_project 7 43822678 43827054 + MGP_129S1SvImJ_P0083499 Klk10 protein_coding protein_coding MGP_129S1SvImJ_T0010885.1 MGP_129S1SvImJ_G0009001.1 mouse_genomes_project 7 44713131 44713204 - Mir7053 miRNA miRNA MGP_129S1SvImJ_T0087620.1 MGP_129S1SvImJ_G0033232.1 mouse_genomes_project 7 146646505 146652045 + MGP_129S1SvImJ_P0087620 Pnpla2 protein_coding protein_coding MGP_129S1SvImJ_T0087621.1 MGP_129S1SvImJ_G0033232.1 mouse_genomes_project 7 146646513 146651394 + MGP_129S1SvImJ_P0087621 Pnpla2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087622.1 MGP_129S1SvImJ_G0033232.1 mouse_genomes_project 7 146646514 146651396 + MGP_129S1SvImJ_P0087622 Pnpla2 protein_coding protein_coding MGP_129S1SvImJ_T0087623.1 MGP_129S1SvImJ_G0033232.1 mouse_genomes_project 7 146646526 146650240 + MGP_129S1SvImJ_P0087623 Pnpla2 protein_coding protein_coding MGP_129S1SvImJ_T0087624.1 MGP_129S1SvImJ_G0033232.1 mouse_genomes_project 7 146646536 146651405 + MGP_129S1SvImJ_P0087624 Pnpla2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087625.1 MGP_129S1SvImJ_G0033232.1 mouse_genomes_project 7 146646914 146649459 + MGP_129S1SvImJ_P0087625 Pnpla2 protein_coding protein_coding MGP_129S1SvImJ_T0087626.1 MGP_129S1SvImJ_G0033232.1 mouse_genomes_project 7 146648325 146649988 + MGP_129S1SvImJ_P0087626 Pnpla2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081479.1 MGP_129S1SvImJ_G0031585.1 mouse_genomes_project 7 2084491 2091617 - MGP_129S1SvImJ_P0081479 Rfpl4 protein_coding protein_coding MGP_129S1SvImJ_T0081480.1 MGP_129S1SvImJ_G0031585.1 mouse_genomes_project 7 2084491 2091617 - MGP_129S1SvImJ_P0081480 Rfpl4 protein_coding protein_coding MGP_129S1SvImJ_T0015902.1 MGP_129S1SvImJ_G0013991.1 mouse_genomes_project 7 116963713 116964115 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102807.1 MGP_129S1SvImJ_G0040639.1 mouse_genomes_project 7 106852262 106852547 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0082090.1 MGP_129S1SvImJ_G0031802.1 mouse_genomes_project 7 17998673 18013909 - MGP_129S1SvImJ_P0082090 Igsf23 protein_coding protein_coding MGP_129S1SvImJ_T0082427.1 MGP_129S1SvImJ_G0031894.1 mouse_genomes_project 7 25618453 25621593 + MGP_129S1SvImJ_P0082427 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0085710.1 MGP_129S1SvImJ_G0032766.1 mouse_genomes_project 7 109077319 109081761 - MGP_129S1SvImJ_P0085710 Mrpl17 protein_coding protein_coding MGP_129S1SvImJ_T0085711.1 MGP_129S1SvImJ_G0032766.1 mouse_genomes_project 7 109080318 109081620 - MGP_129S1SvImJ_P0085711 Mrpl17 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085712.1 MGP_129S1SvImJ_G0032766.1 mouse_genomes_project 7 109080341 109081658 - Mrpl17 protein_coding retained_intron MGP_129S1SvImJ_T0085713.1 MGP_129S1SvImJ_G0032766.1 mouse_genomes_project 7 109080426 109081661 - Mrpl17 protein_coding processed_transcript MGP_129S1SvImJ_T0085714.1 MGP_129S1SvImJ_G0032766.1 mouse_genomes_project 7 109080782 109081690 - MGP_129S1SvImJ_P0085714 Mrpl17 protein_coding protein_coding MGP_129S1SvImJ_T0081547.1 MGP_129S1SvImJ_G0031618.1 mouse_genomes_project 7 4274748 4286981 + MGP_129S1SvImJ_P0081547 Zfp418 protein_coding protein_coding MGP_129S1SvImJ_T0005265.1 MGP_129S1SvImJ_G0004476.1 mouse_genomes_project 7 85757555 85795356 - Gm16638 antisense antisense MGP_129S1SvImJ_T0005327.1 MGP_129S1SvImJ_G0004519.1 mouse_genomes_project 7 137692243 137696212 - Gm15718 antisense antisense MGP_129S1SvImJ_T0002306.1 MGP_129S1SvImJ_G0002217.1 mouse_genomes_project 7 82171501 82173788 + TEC TEC MGP_129S1SvImJ_T0084352.1 MGP_129S1SvImJ_G0032359.1 mouse_genomes_project 7 68769168 68911551 - MGP_129S1SvImJ_P0084352 Lrrc28 protein_coding protein_coding MGP_129S1SvImJ_T0084353.1 MGP_129S1SvImJ_G0032359.1 mouse_genomes_project 7 68769169 68904779 - MGP_129S1SvImJ_P0084353 Lrrc28 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084354.1 MGP_129S1SvImJ_G0032359.1 mouse_genomes_project 7 68771525 68842883 - Lrrc28 protein_coding processed_transcript MGP_129S1SvImJ_T0084355.1 MGP_129S1SvImJ_G0032359.1 mouse_genomes_project 7 68786702 68904815 - MGP_129S1SvImJ_P0084355 Lrrc28 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084356.1 MGP_129S1SvImJ_G0032359.1 mouse_genomes_project 7 68786827 68792821 - Lrrc28 protein_coding processed_transcript MGP_129S1SvImJ_T0084357.1 MGP_129S1SvImJ_G0032359.1 mouse_genomes_project 7 68788822 68883654 - Lrrc28 protein_coding processed_transcript MGP_129S1SvImJ_T0084358.1 MGP_129S1SvImJ_G0032359.1 mouse_genomes_project 7 68788913 68871441 - Lrrc28 protein_coding processed_transcript MGP_129S1SvImJ_T0084359.1 MGP_129S1SvImJ_G0032359.1 mouse_genomes_project 7 68788923 68883603 - Lrrc28 protein_coding processed_transcript MGP_129S1SvImJ_T0084360.1 MGP_129S1SvImJ_G0032359.1 mouse_genomes_project 7 68802179 68911524 - MGP_129S1SvImJ_P0084360 Lrrc28 protein_coding protein_coding MGP_129S1SvImJ_T0084361.1 MGP_129S1SvImJ_G0032359.1 mouse_genomes_project 7 68857385 68911527 - MGP_129S1SvImJ_P0084361 Lrrc28 protein_coding protein_coding MGP_129S1SvImJ_T0084362.1 MGP_129S1SvImJ_G0032359.1 mouse_genomes_project 7 68858387 68883625 - Lrrc28 protein_coding processed_transcript MGP_129S1SvImJ_T0084363.1 MGP_129S1SvImJ_G0032359.1 mouse_genomes_project 7 68881688 68911588 - MGP_129S1SvImJ_P0084363 Lrrc28 protein_coding protein_coding MGP_129S1SvImJ_T0008968.1 MGP_129S1SvImJ_G0007231.1 mouse_genomes_project 7 86699385 86747529 + lincRNA lincRNA MGP_129S1SvImJ_T0101319.1 MGP_129S1SvImJ_G0039386.1 mouse_genomes_project 7 60147324 60147403 - snoRNA snoRNA MGP_129S1SvImJ_T0087486.1 MGP_129S1SvImJ_G0033212.1 mouse_genomes_project 7 146293666 146327410 + MGP_129S1SvImJ_P0087486 Ptdss2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087487.1 MGP_129S1SvImJ_G0033212.1 mouse_genomes_project 7 146301476 146325946 + MGP_129S1SvImJ_P0087487 Ptdss2 protein_coding protein_coding MGP_129S1SvImJ_T0087488.1 MGP_129S1SvImJ_G0033212.1 mouse_genomes_project 7 146301498 146325778 + MGP_129S1SvImJ_P0087488 Ptdss2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087489.1 MGP_129S1SvImJ_G0033212.1 mouse_genomes_project 7 146302506 146329975 + MGP_129S1SvImJ_P0087489 Ptdss2 protein_coding protein_coding MGP_129S1SvImJ_T0087490.1 MGP_129S1SvImJ_G0033212.1 mouse_genomes_project 7 146302521 146327277 + Ptdss2 protein_coding retained_intron MGP_129S1SvImJ_T0087491.1 MGP_129S1SvImJ_G0033212.1 mouse_genomes_project 7 146302564 146315104 + Ptdss2 protein_coding processed_transcript MGP_129S1SvImJ_T0087492.1 MGP_129S1SvImJ_G0033212.1 mouse_genomes_project 7 146302576 146314604 + MGP_129S1SvImJ_P0087492 Ptdss2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087493.1 MGP_129S1SvImJ_G0033212.1 mouse_genomes_project 7 146303658 146318579 + MGP_129S1SvImJ_P0087493 Ptdss2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087494.1 MGP_129S1SvImJ_G0033212.1 mouse_genomes_project 7 146303773 146315133 + Ptdss2 protein_coding processed_transcript MGP_129S1SvImJ_T0085405.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105245678 105263686 + Pgap2 protein_coding processed_transcript MGP_129S1SvImJ_T0085406.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105245805 105267780 + MGP_129S1SvImJ_P0085406 Pgap2 protein_coding protein_coding MGP_129S1SvImJ_T0085407.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105245829 105281536 + MGP_129S1SvImJ_P0085407 Pgap2 protein_coding protein_coding MGP_129S1SvImJ_T0085408.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105245839 105267840 + MGP_129S1SvImJ_P0085408 Pgap2 protein_coding protein_coding MGP_129S1SvImJ_T0085409.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105245991 105259491 + Pgap2 protein_coding processed_transcript MGP_129S1SvImJ_T0085410.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105246002 105279431 + Pgap2 protein_coding retained_intron MGP_129S1SvImJ_T0085411.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105262642 105279137 + MGP_129S1SvImJ_P0085411 Pgap2 protein_coding protein_coding MGP_129S1SvImJ_T0085412.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105262846 105280198 + MGP_129S1SvImJ_P0085412 Pgap2 protein_coding protein_coding MGP_129S1SvImJ_T0085413.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105263230 105281536 + MGP_129S1SvImJ_P0085413 Pgap2 protein_coding protein_coding MGP_129S1SvImJ_T0085414.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105263247 105280196 + MGP_129S1SvImJ_P0085414 Pgap2 protein_coding protein_coding MGP_129S1SvImJ_T0085415.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105263252 105280746 + MGP_129S1SvImJ_P0085415 Pgap2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085416.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105263255 105279203 + MGP_129S1SvImJ_P0085416 Pgap2 protein_coding protein_coding MGP_129S1SvImJ_T0085417.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105263271 105280732 + MGP_129S1SvImJ_P0085417 Pgap2 protein_coding protein_coding MGP_129S1SvImJ_T0085418.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105263273 105268506 + Pgap2 protein_coding retained_intron MGP_129S1SvImJ_T0085419.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105263274 105280632 + Pgap2 protein_coding processed_transcript MGP_129S1SvImJ_T0085420.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105263277 105267749 + MGP_129S1SvImJ_P0085420 Pgap2 protein_coding protein_coding MGP_129S1SvImJ_T0085421.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105263280 105279388 + Pgap2 protein_coding retained_intron MGP_129S1SvImJ_T0085422.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105263286 105280590 + MGP_129S1SvImJ_P0085422 Pgap2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085423.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105263287 105280703 + MGP_129S1SvImJ_P0085423 Pgap2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085424.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105263295 105281529 + Pgap2 protein_coding processed_transcript MGP_129S1SvImJ_T0085425.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105263484 105279268 + MGP_129S1SvImJ_P0085425 Pgap2 protein_coding protein_coding MGP_129S1SvImJ_T0085426.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105267212 105279305 + MGP_129S1SvImJ_P0085426 Pgap2 protein_coding protein_coding MGP_129S1SvImJ_T0085427.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105267225 105280522 + MGP_129S1SvImJ_P0085427 Pgap2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085428.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105271563 105281529 + MGP_129S1SvImJ_P0085428 Pgap2 protein_coding protein_coding MGP_129S1SvImJ_T0085429.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105278823 105280500 + MGP_129S1SvImJ_P0085429 Pgap2 protein_coding protein_coding MGP_129S1SvImJ_T0085430.1 MGP_129S1SvImJ_G0032605.1 mouse_genomes_project 7 105278872 105280624 + Pgap2 protein_coding retained_intron MGP_129S1SvImJ_T0102791.1 MGP_129S1SvImJ_G0040623.1 mouse_genomes_project 7 88416606 88417546 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085496.1 MGP_129S1SvImJ_G0032665.1 mouse_genomes_project 7 106683840 106688456 + MGP_129S1SvImJ_P0085496 Olfr613 protein_coding protein_coding MGP_129S1SvImJ_T0086575.1 MGP_129S1SvImJ_G0032998.1 mouse_genomes_project 7 131079842 131083920 + MGP_129S1SvImJ_P0086575 Tbx6 protein_coding protein_coding MGP_129S1SvImJ_T0086576.1 MGP_129S1SvImJ_G0032998.1 mouse_genomes_project 7 131079842 131083719 + MGP_129S1SvImJ_P0086576 Tbx6 protein_coding protein_coding MGP_129S1SvImJ_T0086099.1 MGP_129S1SvImJ_G0032901.1 mouse_genomes_project 7 122446250 122535095 + MGP_129S1SvImJ_P0086099 Tmc5 protein_coding protein_coding MGP_129S1SvImJ_T0086100.1 MGP_129S1SvImJ_G0032901.1 mouse_genomes_project 7 122446250 122535096 + MGP_129S1SvImJ_P0086100 Tmc5 protein_coding protein_coding MGP_129S1SvImJ_T0086101.1 MGP_129S1SvImJ_G0032901.1 mouse_genomes_project 7 122449541 122535096 + MGP_129S1SvImJ_P0086101 Tmc5 protein_coding protein_coding MGP_129S1SvImJ_T0086102.1 MGP_129S1SvImJ_G0032901.1 mouse_genomes_project 7 122449641 122534670 + MGP_129S1SvImJ_P0086102 Tmc5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0086103.1 MGP_129S1SvImJ_G0032901.1 mouse_genomes_project 7 122485744 122535096 + MGP_129S1SvImJ_P0086103 Tmc5 protein_coding protein_coding MGP_129S1SvImJ_T0015734.1 MGP_129S1SvImJ_G0013823.1 mouse_genomes_project 7 14338654 14338769 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081447.1 MGP_129S1SvImJ_G0031570.1 mouse_genomes_project 7 1879191 1898228 + MGP_129S1SvImJ_P0081447 Ssc5d protein_coding protein_coding MGP_129S1SvImJ_T0084876.1 MGP_129S1SvImJ_G0032479.1 mouse_genomes_project 7 88759178 88760177 - MGP_129S1SvImJ_P0084876 Olfr298 protein_coding protein_coding MGP_129S1SvImJ_T0086723.1 MGP_129S1SvImJ_G0033024.1 mouse_genomes_project 7 131527892 131539959 - MGP_129S1SvImJ_P0086723 Tbc1d10b protein_coding protein_coding MGP_129S1SvImJ_T0086724.1 MGP_129S1SvImJ_G0033024.1 mouse_genomes_project 7 131529155 131535312 - MGP_129S1SvImJ_P0086724 Tbc1d10b protein_coding protein_coding MGP_129S1SvImJ_T0086725.1 MGP_129S1SvImJ_G0033024.1 mouse_genomes_project 7 131529490 131530419 - Tbc1d10b protein_coding retained_intron MGP_129S1SvImJ_T0086726.1 MGP_129S1SvImJ_G0033024.1 mouse_genomes_project 7 131529795 131539238 - Tbc1d10b protein_coding processed_transcript MGP_129S1SvImJ_T0086727.1 MGP_129S1SvImJ_G0033024.1 mouse_genomes_project 7 131530255 131531388 - Tbc1d10b protein_coding retained_intron MGP_129S1SvImJ_T0086728.1 MGP_129S1SvImJ_G0033024.1 mouse_genomes_project 7 131530300 131535212 - Tbc1d10b protein_coding retained_intron MGP_129S1SvImJ_T0086729.1 MGP_129S1SvImJ_G0033024.1 mouse_genomes_project 7 131530686 131535253 - Tbc1d10b protein_coding retained_intron MGP_129S1SvImJ_T0086730.1 MGP_129S1SvImJ_G0033024.1 mouse_genomes_project 7 131534511 131535033 - Tbc1d10b protein_coding retained_intron MGP_129S1SvImJ_T0083716.1 MGP_129S1SvImJ_G0032197.1 mouse_genomes_project 7 45289529 45305603 + MGP_129S1SvImJ_P0083716 Nosip protein_coding protein_coding MGP_129S1SvImJ_T0083717.1 MGP_129S1SvImJ_G0032197.1 mouse_genomes_project 7 45289529 45305603 + MGP_129S1SvImJ_P0083717 Nosip protein_coding protein_coding MGP_129S1SvImJ_T0102761.1 MGP_129S1SvImJ_G0040593.1 mouse_genomes_project 7 48697675 48698558 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085523.1 MGP_129S1SvImJ_G0032690.1 mouse_genomes_project 7 107147813 107148773 + MGP_129S1SvImJ_P0085523 Olfr631 protein_coding protein_coding MGP_129S1SvImJ_T0084031.1 MGP_129S1SvImJ_G0032284.1 mouse_genomes_project 7 47906681 47928126 - MGP_129S1SvImJ_P0084031 protein_coding protein_coding MGP_129S1SvImJ_T0083504.1 MGP_129S1SvImJ_G0032144.1 mouse_genomes_project 7 43855069 43861355 + MGP_129S1SvImJ_P0083504 Klk7 protein_coding protein_coding MGP_129S1SvImJ_T0101359.1 MGP_129S1SvImJ_G0039426.1 mouse_genomes_project 7 147364329 147364423 + Gm25370 snoRNA snoRNA MGP_129S1SvImJ_T0010877.1 MGP_129S1SvImJ_G0008993.1 mouse_genomes_project 7 29064092 29064188 - Gm23368 miRNA miRNA MGP_129S1SvImJ_T0100083.1 MGP_129S1SvImJ_G0038150.1 mouse_genomes_project 7 120443034 120443141 - Gm25423 snRNA snRNA MGP_129S1SvImJ_T0100048.1 MGP_129S1SvImJ_G0038115.1 mouse_genomes_project 7 29344197 29344390 - Gm25259 snRNA snRNA MGP_129S1SvImJ_T0010854.1 MGP_129S1SvImJ_G0008970.1 mouse_genomes_project 7 4423330 4423386 + Mir5620 miRNA miRNA MGP_129S1SvImJ_T0086104.1 MGP_129S1SvImJ_G0032902.1 mouse_genomes_project 7 122548378 122566791 - MGP_129S1SvImJ_P0086104 Gde1 protein_coding protein_coding MGP_129S1SvImJ_T0086105.1 MGP_129S1SvImJ_G0032902.1 mouse_genomes_project 7 122551431 122566393 - MGP_129S1SvImJ_P0086105 Gde1 protein_coding protein_coding MGP_129S1SvImJ_T0081653.1 MGP_129S1SvImJ_G0031668.1 mouse_genomes_project 7 10583744 10584695 + MGP_129S1SvImJ_P0081653 Vmn1r88 protein_coding protein_coding MGP_129S1SvImJ_T0085431.1 MGP_129S1SvImJ_G0032606.1 mouse_genomes_project 7 105282091 105294080 - MGP_129S1SvImJ_P0085431 Rhog protein_coding protein_coding MGP_129S1SvImJ_T0085432.1 MGP_129S1SvImJ_G0032606.1 mouse_genomes_project 7 105282091 105294045 - MGP_129S1SvImJ_P0085432 Rhog protein_coding protein_coding MGP_129S1SvImJ_T0002242.1 MGP_129S1SvImJ_G0002154.1 mouse_genomes_project 7 39725744 39729057 - TEC TEC MGP_129S1SvImJ_T0085223.1 MGP_129S1SvImJ_G0032571.1 mouse_genomes_project 7 103386739 103402172 - MGP_129S1SvImJ_P0085223 Dnajb13 protein_coding protein_coding MGP_129S1SvImJ_T0085224.1 MGP_129S1SvImJ_G0032571.1 mouse_genomes_project 7 103386742 103400609 - Dnajb13 protein_coding processed_transcript MGP_129S1SvImJ_T0085225.1 MGP_129S1SvImJ_G0032571.1 mouse_genomes_project 7 103386800 103399002 - Dnajb13 protein_coding processed_transcript MGP_129S1SvImJ_T0002219.1 MGP_129S1SvImJ_G0002131.1 mouse_genomes_project 7 14655746 14659057 - TEC TEC MGP_129S1SvImJ_T0101338.1 MGP_129S1SvImJ_G0039405.1 mouse_genomes_project 7 105807931 105808064 - Gm24210 snoRNA snoRNA MGP_129S1SvImJ_T0008921.1 MGP_129S1SvImJ_G0007205.1 mouse_genomes_project 7 74720690 74721070 - Gm28746 lincRNA lincRNA MGP_129S1SvImJ_T0015769.1 MGP_129S1SvImJ_G0013858.1 mouse_genomes_project 7 32556274 32556755 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081229.1 MGP_129S1SvImJ_G0031528.1 mouse_genomes_project 7 606967 622815 - MGP_129S1SvImJ_P0081229 Mboat7 protein_coding protein_coding MGP_129S1SvImJ_T0081230.1 MGP_129S1SvImJ_G0031528.1 mouse_genomes_project 7 606971 621406 - MGP_129S1SvImJ_P0081230 Mboat7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081231.1 MGP_129S1SvImJ_G0031528.1 mouse_genomes_project 7 607580 621155 - MGP_129S1SvImJ_P0081231 Mboat7 protein_coding protein_coding MGP_129S1SvImJ_T0081232.1 MGP_129S1SvImJ_G0031528.1 mouse_genomes_project 7 607953 613566 - Mboat7 protein_coding retained_intron MGP_129S1SvImJ_T0081233.1 MGP_129S1SvImJ_G0031528.1 mouse_genomes_project 7 612395 622244 - Mboat7 protein_coding retained_intron MGP_129S1SvImJ_T0081234.1 MGP_129S1SvImJ_G0031528.1 mouse_genomes_project 7 614641 622865 - MGP_129S1SvImJ_P0081234 Mboat7 protein_coding protein_coding MGP_129S1SvImJ_T0081235.1 MGP_129S1SvImJ_G0031528.1 mouse_genomes_project 7 614996 622180 - MGP_129S1SvImJ_P0081235 Mboat7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081236.1 MGP_129S1SvImJ_G0031528.1 mouse_genomes_project 7 615012 622180 - MGP_129S1SvImJ_P0081236 Mboat7 protein_coding protein_coding MGP_129S1SvImJ_T0081237.1 MGP_129S1SvImJ_G0031528.1 mouse_genomes_project 7 617713 622054 - MGP_129S1SvImJ_P0081237 Mboat7 protein_coding protein_coding MGP_129S1SvImJ_T0081238.1 MGP_129S1SvImJ_G0031528.1 mouse_genomes_project 7 618142 622254 - Mboat7 protein_coding retained_intron MGP_129S1SvImJ_T0081239.1 MGP_129S1SvImJ_G0031528.1 mouse_genomes_project 7 618440 622072 - Mboat7 protein_coding retained_intron MGP_129S1SvImJ_T0081240.1 MGP_129S1SvImJ_G0031528.1 mouse_genomes_project 7 618968 622230 - Mboat7 protein_coding retained_intron MGP_129S1SvImJ_T0081241.1 MGP_129S1SvImJ_G0031528.1 mouse_genomes_project 7 620988 621946 - Mboat7 protein_coding retained_intron MGP_129S1SvImJ_T0082960.1 MGP_129S1SvImJ_G0032028.1 mouse_genomes_project 7 29567787 29571080 - MGP_129S1SvImJ_P0082960 Psenen protein_coding protein_coding MGP_129S1SvImJ_T0005267.1 MGP_129S1SvImJ_G0004478.1 mouse_genomes_project 7 91925412 91926774 + Prss23os antisense antisense MGP_129S1SvImJ_T0005268.1 MGP_129S1SvImJ_G0004478.1 mouse_genomes_project 7 91925428 91925897 + Prss23os antisense antisense MGP_129S1SvImJ_T0084958.1 MGP_129S1SvImJ_G0032510.1 mouse_genomes_project 7 93553821 94996250 + MGP_129S1SvImJ_P0084958 Dlg2 protein_coding protein_coding MGP_129S1SvImJ_T0084959.1 MGP_129S1SvImJ_G0032510.1 mouse_genomes_project 7 93553841 94830829 + Dlg2 protein_coding processed_transcript MGP_129S1SvImJ_T0084960.1 MGP_129S1SvImJ_G0032510.1 mouse_genomes_project 7 93553843 94996250 + MGP_129S1SvImJ_P0084960 Dlg2 protein_coding protein_coding MGP_129S1SvImJ_T0084961.1 MGP_129S1SvImJ_G0032510.1 mouse_genomes_project 7 94183798 94526838 + Dlg2 protein_coding retained_intron MGP_129S1SvImJ_T0084962.1 MGP_129S1SvImJ_G0032510.1 mouse_genomes_project 7 94223325 94996250 + MGP_129S1SvImJ_P0084962 Dlg2 protein_coding protein_coding MGP_129S1SvImJ_T0084963.1 MGP_129S1SvImJ_G0032510.1 mouse_genomes_project 7 94223576 94464320 + Dlg2 protein_coding processed_transcript MGP_129S1SvImJ_T0084964.1 MGP_129S1SvImJ_G0032510.1 mouse_genomes_project 7 94223578 94993864 + MGP_129S1SvImJ_P0084964 Dlg2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0084965.1 MGP_129S1SvImJ_G0032510.1 mouse_genomes_project 7 94591103 94996250 + MGP_129S1SvImJ_P0084965 Dlg2 protein_coding protein_coding MGP_129S1SvImJ_T0084966.1 MGP_129S1SvImJ_G0032510.1 mouse_genomes_project 7 94716300 94832527 + Dlg2 protein_coding retained_intron MGP_129S1SvImJ_T0084967.1 MGP_129S1SvImJ_G0032510.1 mouse_genomes_project 7 94771677 94995731 + Dlg2 protein_coding processed_transcript MGP_129S1SvImJ_T0084968.1 MGP_129S1SvImJ_G0032510.1 mouse_genomes_project 7 94771881 94978995 + Dlg2 protein_coding processed_transcript MGP_129S1SvImJ_T0085476.1 MGP_129S1SvImJ_G0032646.1 mouse_genomes_project 7 106303712 106304648 + MGP_129S1SvImJ_P0085476 Olfr594 protein_coding protein_coding MGP_129S1SvImJ_T0085538.1 MGP_129S1SvImJ_G0032705.1 mouse_genomes_project 7 107376543 107386961 - MGP_129S1SvImJ_P0085538 Olfm5 protein_coding protein_coding MGP_129S1SvImJ_T0085539.1 MGP_129S1SvImJ_G0032705.1 mouse_genomes_project 7 107377647 107386942 - MGP_129S1SvImJ_P0085539 Olfm5 protein_coding protein_coding MGP_129S1SvImJ_T0085644.1 MGP_129S1SvImJ_G0032756.1 mouse_genomes_project 7 108853378 108861498 - MGP_129S1SvImJ_P0085644 Hpx protein_coding protein_coding MGP_129S1SvImJ_T0082857.1 MGP_129S1SvImJ_G0032005.1 mouse_genomes_project 7 29162866 29170881 - MGP_129S1SvImJ_P0082857 Capns1 protein_coding protein_coding MGP_129S1SvImJ_T0082858.1 MGP_129S1SvImJ_G0032005.1 mouse_genomes_project 7 29162914 29168936 - MGP_129S1SvImJ_P0082858 Capns1 protein_coding protein_coding MGP_129S1SvImJ_T0082859.1 MGP_129S1SvImJ_G0032005.1 mouse_genomes_project 7 29163092 29166046 - Capns1 protein_coding processed_transcript MGP_129S1SvImJ_T0082860.1 MGP_129S1SvImJ_G0032005.1 mouse_genomes_project 7 29163407 29169611 - Capns1 protein_coding processed_transcript MGP_129S1SvImJ_T0082861.1 MGP_129S1SvImJ_G0032005.1 mouse_genomes_project 7 29163431 29168240 - Capns1 protein_coding processed_transcript MGP_129S1SvImJ_T0082862.1 MGP_129S1SvImJ_G0032005.1 mouse_genomes_project 7 29165868 29169875 - MGP_129S1SvImJ_P0082862 Capns1 protein_coding protein_coding MGP_129S1SvImJ_T0082863.1 MGP_129S1SvImJ_G0032005.1 mouse_genomes_project 7 29169375 29170753 - Capns1 protein_coding retained_intron MGP_129S1SvImJ_T0008879.1 MGP_129S1SvImJ_G0007173.1 mouse_genomes_project 7 45484318 45504074 + lincRNA lincRNA MGP_129S1SvImJ_T0008880.1 MGP_129S1SvImJ_G0007173.1 mouse_genomes_project 7 45504035 45517679 + lincRNA lincRNA MGP_129S1SvImJ_T0084744.1 MGP_129S1SvImJ_G0032427.1 mouse_genomes_project 7 83398722 83400522 - Rps17 protein_coding processed_transcript MGP_129S1SvImJ_T0084745.1 MGP_129S1SvImJ_G0032427.1 mouse_genomes_project 7 83398723 83401245 - MGP_129S1SvImJ_P0084745 Rps17 protein_coding protein_coding MGP_129S1SvImJ_T0084746.1 MGP_129S1SvImJ_G0032427.1 mouse_genomes_project 7 83398730 83401225 - Rps17 protein_coding retained_intron MGP_129S1SvImJ_T0084747.1 MGP_129S1SvImJ_G0032427.1 mouse_genomes_project 7 83399407 83401223 - Rps17 protein_coding retained_intron MGP_129S1SvImJ_T0084748.1 MGP_129S1SvImJ_G0032427.1 mouse_genomes_project 7 83400694 83401215 - Rps17 protein_coding processed_transcript MGP_129S1SvImJ_T0082536.1 MGP_129S1SvImJ_G0031918.1 mouse_genomes_project 7 26265697 26323644 + MGP_129S1SvImJ_P0082536 Akt2 protein_coding protein_coding MGP_129S1SvImJ_T0082537.1 MGP_129S1SvImJ_G0031918.1 mouse_genomes_project 7 26267541 26322257 + MGP_129S1SvImJ_P0082537 Akt2 protein_coding protein_coding MGP_129S1SvImJ_T0082538.1 MGP_129S1SvImJ_G0031918.1 mouse_genomes_project 7 26268163 26306293 + MGP_129S1SvImJ_P0082538 Akt2 protein_coding protein_coding MGP_129S1SvImJ_T0082539.1 MGP_129S1SvImJ_G0031918.1 mouse_genomes_project 7 26268253 26313377 + MGP_129S1SvImJ_P0082539 Akt2 protein_coding protein_coding MGP_129S1SvImJ_T0082540.1 MGP_129S1SvImJ_G0031918.1 mouse_genomes_project 7 26269343 26293745 + Akt2 protein_coding processed_transcript MGP_129S1SvImJ_T0082541.1 MGP_129S1SvImJ_G0031918.1 mouse_genomes_project 7 26272629 26295640 + MGP_129S1SvImJ_P0082541 Akt2 protein_coding protein_coding MGP_129S1SvImJ_T0082542.1 MGP_129S1SvImJ_G0031918.1 mouse_genomes_project 7 26281568 26306317 + MGP_129S1SvImJ_P0082542 Akt2 protein_coding protein_coding MGP_129S1SvImJ_T0082543.1 MGP_129S1SvImJ_G0031918.1 mouse_genomes_project 7 26281588 26322255 + MGP_129S1SvImJ_P0082543 Akt2 protein_coding protein_coding MGP_129S1SvImJ_T0082544.1 MGP_129S1SvImJ_G0031918.1 mouse_genomes_project 7 26281629 26322260 + MGP_129S1SvImJ_P0082544 Akt2 protein_coding protein_coding MGP_129S1SvImJ_T0082545.1 MGP_129S1SvImJ_G0031918.1 mouse_genomes_project 7 26283519 26313357 + MGP_129S1SvImJ_P0082545 Akt2 protein_coding protein_coding MGP_129S1SvImJ_T0082546.1 MGP_129S1SvImJ_G0031918.1 mouse_genomes_project 7 26283775 26295693 + MGP_129S1SvImJ_P0082546 Akt2 protein_coding protein_coding MGP_129S1SvImJ_T0082547.1 MGP_129S1SvImJ_G0031918.1 mouse_genomes_project 7 26284433 26320012 + MGP_129S1SvImJ_P0082547 Akt2 protein_coding protein_coding MGP_129S1SvImJ_T0082548.1 MGP_129S1SvImJ_G0031918.1 mouse_genomes_project 7 26305972 26316651 + Akt2 protein_coding retained_intron MGP_129S1SvImJ_T0082549.1 MGP_129S1SvImJ_G0031918.1 mouse_genomes_project 7 26317893 26319285 + Akt2 protein_coding retained_intron MGP_129S1SvImJ_T0002255.1 MGP_129S1SvImJ_G0002167.1 mouse_genomes_project 7 55828435 55830609 + TEC TEC MGP_129S1SvImJ_T0081865.1 MGP_129S1SvImJ_G0031734.1 mouse_genomes_project 7 15786297 15792755 + MGP_129S1SvImJ_P0081865 Ceacam11 protein_coding protein_coding MGP_129S1SvImJ_T0008829.1 MGP_129S1SvImJ_G0007133.1 mouse_genomes_project 7 24383006 24396999 + Gm30146 lincRNA lincRNA MGP_129S1SvImJ_T0015919.1 MGP_129S1SvImJ_G0014008.1 mouse_genomes_project 7 131015644 131016118 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085176.1 MGP_129S1SvImJ_G0032562.1 mouse_genomes_project 7 102945269 102985703 - MGP_129S1SvImJ_P0085176 Pold3 protein_coding protein_coding MGP_129S1SvImJ_T0085177.1 MGP_129S1SvImJ_G0032562.1 mouse_genomes_project 7 102946554 102985593 - MGP_129S1SvImJ_P0085177 Pold3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085178.1 MGP_129S1SvImJ_G0032562.1 mouse_genomes_project 7 102946744 102956584 - Pold3 protein_coding retained_intron MGP_129S1SvImJ_T0085179.1 MGP_129S1SvImJ_G0032562.1 mouse_genomes_project 7 102946823 102952959 - Pold3 protein_coding retained_intron MGP_129S1SvImJ_T0085180.1 MGP_129S1SvImJ_G0032562.1 mouse_genomes_project 7 102959228 102963538 - Pold3 protein_coding retained_intron MGP_129S1SvImJ_T0085181.1 MGP_129S1SvImJ_G0032562.1 mouse_genomes_project 7 102961908 102963411 - Pold3 protein_coding retained_intron MGP_129S1SvImJ_T0085182.1 MGP_129S1SvImJ_G0032562.1 mouse_genomes_project 7 102962439 102985596 - Pold3 protein_coding processed_transcript MGP_129S1SvImJ_T0085183.1 MGP_129S1SvImJ_G0032562.1 mouse_genomes_project 7 102976400 102984045 - Pold3 protein_coding processed_transcript MGP_129S1SvImJ_T0084418.1 MGP_129S1SvImJ_G0032372.1 mouse_genomes_project 7 75880965 76200169 - MGP_129S1SvImJ_P0084418 Slco3a1 protein_coding protein_coding MGP_129S1SvImJ_T0084419.1 MGP_129S1SvImJ_G0032372.1 mouse_genomes_project 7 75887428 76200150 - MGP_129S1SvImJ_P0084419 Slco3a1 protein_coding protein_coding MGP_129S1SvImJ_T0084420.1 MGP_129S1SvImJ_G0032372.1 mouse_genomes_project 7 75902736 76200316 - MGP_129S1SvImJ_P0084420 Slco3a1 protein_coding protein_coding MGP_129S1SvImJ_T0084421.1 MGP_129S1SvImJ_G0032372.1 mouse_genomes_project 7 75950669 75971811 - Slco3a1 protein_coding retained_intron MGP_129S1SvImJ_T0084422.1 MGP_129S1SvImJ_G0032372.1 mouse_genomes_project 7 75971365 76200016 - MGP_129S1SvImJ_P0084422 Slco3a1 protein_coding protein_coding MGP_129S1SvImJ_T0084423.1 MGP_129S1SvImJ_G0032372.1 mouse_genomes_project 7 75985751 76147734 - Slco3a1 protein_coding retained_intron MGP_129S1SvImJ_T0084424.1 MGP_129S1SvImJ_G0032372.1 mouse_genomes_project 7 76147637 76198136 - MGP_129S1SvImJ_P0084424 Slco3a1 protein_coding protein_coding MGP_129S1SvImJ_T0084425.1 MGP_129S1SvImJ_G0032372.1 mouse_genomes_project 7 76147784 76175493 - Slco3a1 protein_coding processed_transcript MGP_129S1SvImJ_T0015874.1 MGP_129S1SvImJ_G0013963.1 mouse_genomes_project 7 98571537 98572126 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0083012.1 MGP_129S1SvImJ_G0032033.1 mouse_genomes_project 7 29611651 29621407 - MGP_129S1SvImJ_P0083012 Upk1a protein_coding protein_coding MGP_129S1SvImJ_T0005181.1 MGP_129S1SvImJ_G0004414.1 mouse_genomes_project 7 17757159 17763905 + Gm20512 antisense antisense MGP_129S1SvImJ_T0102716.1 MGP_129S1SvImJ_G0040549.1 mouse_genomes_project 7 22008973 22009863 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0005167.1 MGP_129S1SvImJ_G0004407.1 mouse_genomes_project 7 1546847 1550423 + Gm44877 antisense antisense MGP_129S1SvImJ_T0084565.1 MGP_129S1SvImJ_G0032395.1 mouse_genomes_project 7 81649027 81696886 + MGP_129S1SvImJ_P0084565 Wdr93 protein_coding protein_coding MGP_129S1SvImJ_T0087497.1 MGP_129S1SvImJ_G0033214.1 mouse_genomes_project 7 146365247 146370103 - MGP_129S1SvImJ_P0087497 Hras protein_coding protein_coding MGP_129S1SvImJ_T0087498.1 MGP_129S1SvImJ_G0033214.1 mouse_genomes_project 7 146366076 146370147 - MGP_129S1SvImJ_P0087498 Hras protein_coding protein_coding MGP_129S1SvImJ_T0087499.1 MGP_129S1SvImJ_G0033214.1 mouse_genomes_project 7 146367068 146370137 - Hras protein_coding retained_intron MGP_129S1SvImJ_T0087500.1 MGP_129S1SvImJ_G0033214.1 mouse_genomes_project 7 146367068 146370148 - MGP_129S1SvImJ_P0087500 Hras protein_coding protein_coding MGP_129S1SvImJ_T0087501.1 MGP_129S1SvImJ_G0033214.1 mouse_genomes_project 7 146367069 146368647 - Hras protein_coding processed_transcript MGP_129S1SvImJ_T0087502.1 MGP_129S1SvImJ_G0033214.1 mouse_genomes_project 7 146367072 146368120 - Hras protein_coding processed_transcript MGP_129S1SvImJ_T0087503.1 MGP_129S1SvImJ_G0033214.1 mouse_genomes_project 7 146367072 146370025 - MGP_129S1SvImJ_P0087503 Hras protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083024.1 MGP_129S1SvImJ_G0032038.1 mouse_genomes_project 7 29688225 29689108 - MGP_129S1SvImJ_P0083024 Pmis2 protein_coding protein_coding MGP_129S1SvImJ_T0083025.1 MGP_129S1SvImJ_G0032038.1 mouse_genomes_project 7 29688260 29689103 - Pmis2 protein_coding processed_transcript MGP_129S1SvImJ_T0086459.1 MGP_129S1SvImJ_G0032981.1 mouse_genomes_project 7 130741050 130749159 - MGP_129S1SvImJ_P0086459 Sh2b1 protein_coding protein_coding MGP_129S1SvImJ_T0086460.1 MGP_129S1SvImJ_G0032981.1 mouse_genomes_project 7 130741052 130749172 - MGP_129S1SvImJ_P0086460 Sh2b1 protein_coding protein_coding MGP_129S1SvImJ_T0086461.1 MGP_129S1SvImJ_G0032981.1 mouse_genomes_project 7 130741053 130749199 - MGP_129S1SvImJ_P0086461 Sh2b1 protein_coding protein_coding MGP_129S1SvImJ_T0086462.1 MGP_129S1SvImJ_G0032981.1 mouse_genomes_project 7 130741055 130747139 - MGP_129S1SvImJ_P0086462 Sh2b1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086463.1 MGP_129S1SvImJ_G0032981.1 mouse_genomes_project 7 130741055 130748893 - MGP_129S1SvImJ_P0086463 Sh2b1 protein_coding protein_coding MGP_129S1SvImJ_T0086464.1 MGP_129S1SvImJ_G0032981.1 mouse_genomes_project 7 130741055 130748891 - MGP_129S1SvImJ_P0086464 Sh2b1 protein_coding protein_coding MGP_129S1SvImJ_T0086465.1 MGP_129S1SvImJ_G0032981.1 mouse_genomes_project 7 130741061 130749119 - MGP_129S1SvImJ_P0086465 Sh2b1 protein_coding protein_coding MGP_129S1SvImJ_T0086466.1 MGP_129S1SvImJ_G0032981.1 mouse_genomes_project 7 130742955 130744252 - Sh2b1 protein_coding processed_transcript MGP_129S1SvImJ_T0086467.1 MGP_129S1SvImJ_G0032981.1 mouse_genomes_project 7 130746862 130749493 - MGP_129S1SvImJ_P0086467 Sh2b1 protein_coding protein_coding MGP_129S1SvImJ_T0083595.1 MGP_129S1SvImJ_G0032166.1 mouse_genomes_project 7 44675605 44699684 - MGP_129S1SvImJ_P0083595 Mybpc2 protein_coding protein_coding MGP_129S1SvImJ_T0083596.1 MGP_129S1SvImJ_G0032166.1 mouse_genomes_project 7 44675738 44704983 - MGP_129S1SvImJ_P0083596 Mybpc2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0015913.1 MGP_129S1SvImJ_G0014002.1 mouse_genomes_project 7 127129493 127130004 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015869.1 MGP_129S1SvImJ_G0013958.1 mouse_genomes_project 7 96738502 96738772 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002252.1 MGP_129S1SvImJ_G0002164.1 mouse_genomes_project 7 55695200 55696738 + TEC TEC MGP_129S1SvImJ_T0010918.1 MGP_129S1SvImJ_G0009034.1 mouse_genomes_project 7 66112995 66113073 - Gm25249 miRNA miRNA MGP_129S1SvImJ_T0083312.1 MGP_129S1SvImJ_G0032093.1 mouse_genomes_project 7 34977837 35035361 + MGP_129S1SvImJ_P0083312 Ankrd27 protein_coding protein_coding MGP_129S1SvImJ_T0083313.1 MGP_129S1SvImJ_G0032093.1 mouse_genomes_project 7 34977843 35000642 + MGP_129S1SvImJ_P0083313 Ankrd27 protein_coding protein_coding MGP_129S1SvImJ_T0083314.1 MGP_129S1SvImJ_G0032093.1 mouse_genomes_project 7 34977843 34993194 + MGP_129S1SvImJ_P0083314 Ankrd27 protein_coding protein_coding MGP_129S1SvImJ_T0083315.1 MGP_129S1SvImJ_G0032093.1 mouse_genomes_project 7 34977848 35030695 + MGP_129S1SvImJ_P0083315 Ankrd27 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083316.1 MGP_129S1SvImJ_G0032093.1 mouse_genomes_project 7 34977868 34995440 + MGP_129S1SvImJ_P0083316 Ankrd27 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083317.1 MGP_129S1SvImJ_G0032093.1 mouse_genomes_project 7 34977870 35035361 + MGP_129S1SvImJ_P0083317 Ankrd27 protein_coding protein_coding MGP_129S1SvImJ_T0083318.1 MGP_129S1SvImJ_G0032093.1 mouse_genomes_project 7 34992976 34995910 + Ankrd27 protein_coding retained_intron MGP_129S1SvImJ_T0083319.1 MGP_129S1SvImJ_G0032093.1 mouse_genomes_project 7 35003415 35006310 + Ankrd27 protein_coding retained_intron MGP_129S1SvImJ_T0083320.1 MGP_129S1SvImJ_G0032093.1 mouse_genomes_project 7 35007213 35019727 + MGP_129S1SvImJ_P0083320 Ankrd27 protein_coding protein_coding MGP_129S1SvImJ_T0083321.1 MGP_129S1SvImJ_G0032093.1 mouse_genomes_project 7 35010744 35018822 + MGP_129S1SvImJ_P0083321 Ankrd27 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082129.1 MGP_129S1SvImJ_G0031820.1 mouse_genomes_project 7 22542423 22556622 + MGP_129S1SvImJ_P0082129 Zfp108 protein_coding protein_coding MGP_129S1SvImJ_T0082130.1 MGP_129S1SvImJ_G0031820.1 mouse_genomes_project 7 22542637 22556690 + MGP_129S1SvImJ_P0082130 Zfp108 protein_coding protein_coding MGP_129S1SvImJ_T0082131.1 MGP_129S1SvImJ_G0031820.1 mouse_genomes_project 7 22549328 22556161 + MGP_129S1SvImJ_P0082131 Zfp108 protein_coding protein_coding MGP_129S1SvImJ_T0083027.1 MGP_129S1SvImJ_G0032040.1 mouse_genomes_project 7 29718941 29727632 + Atp4a protein_coding retained_intron MGP_129S1SvImJ_T0083028.1 MGP_129S1SvImJ_G0032040.1 mouse_genomes_project 7 29718941 29734394 + MGP_129S1SvImJ_P0083028 Atp4a protein_coding protein_coding MGP_129S1SvImJ_T0083029.1 MGP_129S1SvImJ_G0032040.1 mouse_genomes_project 7 29718964 29734393 + MGP_129S1SvImJ_P0083029 Atp4a protein_coding protein_coding MGP_129S1SvImJ_T0083030.1 MGP_129S1SvImJ_G0032040.1 mouse_genomes_project 7 29724555 29727381 + MGP_129S1SvImJ_P0083030 Atp4a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083031.1 MGP_129S1SvImJ_G0032040.1 mouse_genomes_project 7 29729162 29734050 + Atp4a protein_coding retained_intron MGP_129S1SvImJ_T0002290.1 MGP_129S1SvImJ_G0002201.1 mouse_genomes_project 7 78441292 78442860 - TEC TEC MGP_129S1SvImJ_T0015743.1 MGP_129S1SvImJ_G0013832.1 mouse_genomes_project 7 17967015 17967588 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084380.1 MGP_129S1SvImJ_G0032362.1 mouse_genomes_project 7 69239232 69522551 + MGP_129S1SvImJ_P0084380 Igf1r protein_coding protein_coding MGP_129S1SvImJ_T0084035.1 MGP_129S1SvImJ_G0032287.1 mouse_genomes_project 7 48756195 48757232 - MGP_129S1SvImJ_P0084035 Mrgprb5 protein_coding protein_coding MGP_129S1SvImJ_T0085604.1 MGP_129S1SvImJ_G0032742.1 mouse_genomes_project 7 108411139 108412227 - MGP_129S1SvImJ_P0085604 protein_coding protein_coding MGP_129S1SvImJ_T0084828.1 MGP_129S1SvImJ_G0032451.1 mouse_genomes_project 7 85806348 85818996 - Il16 protein_coding retained_intron MGP_129S1SvImJ_T0084829.1 MGP_129S1SvImJ_G0032451.1 mouse_genomes_project 7 85806564 85901415 - MGP_129S1SvImJ_P0084829 Il16 protein_coding protein_coding MGP_129S1SvImJ_T0084830.1 MGP_129S1SvImJ_G0032451.1 mouse_genomes_project 7 85813065 85818826 - Il16 protein_coding retained_intron MGP_129S1SvImJ_T0084831.1 MGP_129S1SvImJ_G0032451.1 mouse_genomes_project 7 85824450 85911632 - MGP_129S1SvImJ_P0084831 Il16 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084832.1 MGP_129S1SvImJ_G0032451.1 mouse_genomes_project 7 85888393 85898287 - MGP_129S1SvImJ_P0084832 Il16 protein_coding protein_coding MGP_129S1SvImJ_T0084833.1 MGP_129S1SvImJ_G0032451.1 mouse_genomes_project 7 85888393 85905816 - MGP_129S1SvImJ_P0084833 Il16 protein_coding protein_coding MGP_129S1SvImJ_T0087804.1 MGP_129S1SvImJ_G0033268.1 mouse_genomes_project 7 148333613 148348810 + MGP_129S1SvImJ_P0087804 Cd81 protein_coding protein_coding MGP_129S1SvImJ_T0087805.1 MGP_129S1SvImJ_G0033268.1 mouse_genomes_project 7 148333668 148346489 + Cd81 protein_coding retained_intron MGP_129S1SvImJ_T0087806.1 MGP_129S1SvImJ_G0033268.1 mouse_genomes_project 7 148339450 148348038 + Cd81 protein_coding processed_transcript MGP_129S1SvImJ_T0087807.1 MGP_129S1SvImJ_G0033268.1 mouse_genomes_project 7 148347076 148348481 + Cd81 protein_coding retained_intron MGP_129S1SvImJ_T0082422.1 MGP_129S1SvImJ_G0031891.1 mouse_genomes_project 7 25390825 25403604 + MGP_129S1SvImJ_P0082422 Cyp2g1 protein_coding protein_coding MGP_129S1SvImJ_T0082423.1 MGP_129S1SvImJ_G0031891.1 mouse_genomes_project 7 25399630 25401507 + Cyp2g1 protein_coding retained_intron MGP_129S1SvImJ_T0009017.1 MGP_129S1SvImJ_G0007264.1 mouse_genomes_project 7 129106687 129113160 + Gm45092 lincRNA lincRNA MGP_129S1SvImJ_T0015921.1 MGP_129S1SvImJ_G0014010.1 mouse_genomes_project 7 131045322 131045684 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002229.1 MGP_129S1SvImJ_G0002141.1 mouse_genomes_project 7 34401758 34402375 - TEC TEC MGP_129S1SvImJ_T0081531.1 MGP_129S1SvImJ_G0031610.1 mouse_genomes_project 7 3596367 3600287 - MGP_129S1SvImJ_P0081531 Olfr1348 protein_coding protein_coding MGP_129S1SvImJ_T0018397.1 MGP_129S1SvImJ_G0015668.1 mouse_genomes_project 7 49485336 49493296 + processed_transcript processed_transcript MGP_129S1SvImJ_T0018398.1 MGP_129S1SvImJ_G0015668.1 mouse_genomes_project 7 49488678 49493943 + processed_transcript processed_transcript MGP_129S1SvImJ_T0082012.1 MGP_129S1SvImJ_G0031780.1 mouse_genomes_project 7 17521608 17524122 - MGP_129S1SvImJ_P0082012 Bloc1s3 protein_coding protein_coding MGP_129S1SvImJ_T0010900.1 MGP_129S1SvImJ_G0009016.1 mouse_genomes_project 7 62719994 62720074 - Mir344d-2 miRNA miRNA MGP_129S1SvImJ_T0102794.1 MGP_129S1SvImJ_G0040626.1 mouse_genomes_project 7 88702324 88703231 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102740.1 MGP_129S1SvImJ_G0040572.1 mouse_genomes_project 7 42179664 42179906 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0083186.1 MGP_129S1SvImJ_G0032068.1 mouse_genomes_project 7 33149684 33151723 - MGP_129S1SvImJ_P0083186 Scgb2b26 protein_coding protein_coding MGP_129S1SvImJ_T0081339.1 MGP_129S1SvImJ_G0031546.1 mouse_genomes_project 7 1395740 1415573 - MGP_129S1SvImJ_P0081339 Ppp1r12c protein_coding protein_coding MGP_129S1SvImJ_T0081340.1 MGP_129S1SvImJ_G0031546.1 mouse_genomes_project 7 1395740 1415892 - MGP_129S1SvImJ_P0081340 Ppp1r12c protein_coding protein_coding MGP_129S1SvImJ_T0081341.1 MGP_129S1SvImJ_G0031546.1 mouse_genomes_project 7 1395743 1398253 - Ppp1r12c protein_coding retained_intron MGP_129S1SvImJ_T0081342.1 MGP_129S1SvImJ_G0031546.1 mouse_genomes_project 7 1395808 1396855 - Ppp1r12c protein_coding processed_transcript MGP_129S1SvImJ_T0081343.1 MGP_129S1SvImJ_G0031546.1 mouse_genomes_project 7 1397854 1398720 - Ppp1r12c protein_coding retained_intron MGP_129S1SvImJ_T0081344.1 MGP_129S1SvImJ_G0031546.1 mouse_genomes_project 7 1398160 1399535 - Ppp1r12c protein_coding retained_intron MGP_129S1SvImJ_T0081345.1 MGP_129S1SvImJ_G0031546.1 mouse_genomes_project 7 1398237 1399929 - Ppp1r12c protein_coding retained_intron MGP_129S1SvImJ_T0081346.1 MGP_129S1SvImJ_G0031546.1 mouse_genomes_project 7 1399426 1400153 - Ppp1r12c protein_coding retained_intron MGP_129S1SvImJ_T0081347.1 MGP_129S1SvImJ_G0031546.1 mouse_genomes_project 7 1400371 1400955 - Ppp1r12c protein_coding retained_intron MGP_129S1SvImJ_T0081348.1 MGP_129S1SvImJ_G0031546.1 mouse_genomes_project 7 1403397 1415876 - Ppp1r12c protein_coding retained_intron MGP_129S1SvImJ_T0081349.1 MGP_129S1SvImJ_G0031546.1 mouse_genomes_project 7 1404036 1415741 - MGP_129S1SvImJ_P0081349 Ppp1r12c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0015900.1 MGP_129S1SvImJ_G0013989.1 mouse_genomes_project 7 114016365 114016958 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009066.1 MGP_129S1SvImJ_G0007295.1 mouse_genomes_project 7 147836486 147839081 - H19 lincRNA lincRNA MGP_129S1SvImJ_T0009067.1 MGP_129S1SvImJ_G0007295.1 mouse_genomes_project 7 147836515 147839077 - H19 lincRNA lincRNA MGP_129S1SvImJ_T0009068.1 MGP_129S1SvImJ_G0007295.1 mouse_genomes_project 7 147836591 147837496 - H19 lincRNA lincRNA MGP_129S1SvImJ_T0009069.1 MGP_129S1SvImJ_G0007295.1 mouse_genomes_project 7 147837253 147837868 - H19 lincRNA lincRNA MGP_129S1SvImJ_T0009070.1 MGP_129S1SvImJ_G0007295.1 mouse_genomes_project 7 147837464 147839053 - H19 lincRNA lincRNA MGP_129S1SvImJ_T0083194.1 MGP_129S1SvImJ_G0032071.1 mouse_genomes_project 7 33339790 33341189 + MGP_129S1SvImJ_P0083194 Scgb1b27 protein_coding protein_coding MGP_129S1SvImJ_T0083195.1 MGP_129S1SvImJ_G0032071.1 mouse_genomes_project 7 33339874 33340757 + MGP_129S1SvImJ_P0083195 Scgb1b27 protein_coding protein_coding MGP_129S1SvImJ_T0002303.1 MGP_129S1SvImJ_G0002214.1 mouse_genomes_project 7 81839733 81842099 - TEC TEC MGP_129S1SvImJ_T0081310.1 MGP_129S1SvImJ_G0031539.1 mouse_genomes_project 7 1071590 1074050 - MGP_129S1SvImJ_P0081310 Leng9 protein_coding protein_coding MGP_129S1SvImJ_T0083358.1 MGP_129S1SvImJ_G0032099.1 mouse_genomes_project 7 37489770 37552666 - MGP_129S1SvImJ_P0083358 Uri1 protein_coding protein_coding MGP_129S1SvImJ_T0083359.1 MGP_129S1SvImJ_G0032099.1 mouse_genomes_project 7 37489771 37499297 - Uri1 protein_coding processed_transcript MGP_129S1SvImJ_T0083360.1 MGP_129S1SvImJ_G0032099.1 mouse_genomes_project 7 37490420 37552690 - MGP_129S1SvImJ_P0083360 Uri1 protein_coding protein_coding MGP_129S1SvImJ_T0083361.1 MGP_129S1SvImJ_G0032099.1 mouse_genomes_project 7 37491079 37492307 - MGP_129S1SvImJ_P0083361 Uri1 protein_coding protein_coding MGP_129S1SvImJ_T0083362.1 MGP_129S1SvImJ_G0032099.1 mouse_genomes_project 7 37491142 37556693 - MGP_129S1SvImJ_P0083362 Uri1 protein_coding protein_coding MGP_129S1SvImJ_T0083363.1 MGP_129S1SvImJ_G0032099.1 mouse_genomes_project 7 37494971 37495501 - Uri1 protein_coding processed_transcript MGP_129S1SvImJ_T0083364.1 MGP_129S1SvImJ_G0032099.1 mouse_genomes_project 7 37499273 37552646 - MGP_129S1SvImJ_P0083364 Uri1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0010902.1 MGP_129S1SvImJ_G0009018.1 mouse_genomes_project 7 62743070 62743139 - Gm22466 miRNA miRNA MGP_129S1SvImJ_T0018371.1 MGP_129S1SvImJ_G0015660.1 mouse_genomes_project 7 28503188 28508204 - A330087D11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0086216.1 MGP_129S1SvImJ_G0032933.1 mouse_genomes_project 7 124729055 124805670 + MGP_129S1SvImJ_P0086216 Vwa3a protein_coding protein_coding MGP_129S1SvImJ_T0086217.1 MGP_129S1SvImJ_G0032933.1 mouse_genomes_project 7 124729055 124789884 + MGP_129S1SvImJ_P0086217 Vwa3a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086218.1 MGP_129S1SvImJ_G0032933.1 mouse_genomes_project 7 124729545 124805871 + MGP_129S1SvImJ_P0086218 Vwa3a protein_coding protein_coding MGP_129S1SvImJ_T0086219.1 MGP_129S1SvImJ_G0032933.1 mouse_genomes_project 7 124729545 124805667 + MGP_129S1SvImJ_P0086219 Vwa3a protein_coding protein_coding MGP_129S1SvImJ_T0086220.1 MGP_129S1SvImJ_G0032933.1 mouse_genomes_project 7 124729609 124805540 + MGP_129S1SvImJ_P0086220 Vwa3a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0086221.1 MGP_129S1SvImJ_G0032933.1 mouse_genomes_project 7 124782150 124789885 + MGP_129S1SvImJ_P0086221 Vwa3a protein_coding protein_coding MGP_129S1SvImJ_T0086222.1 MGP_129S1SvImJ_G0032933.1 mouse_genomes_project 7 124783808 124789885 + Vwa3a protein_coding processed_transcript MGP_129S1SvImJ_T0086223.1 MGP_129S1SvImJ_G0032933.1 mouse_genomes_project 7 124786238 124792401 + MGP_129S1SvImJ_P0086223 Vwa3a protein_coding protein_coding MGP_129S1SvImJ_T0083532.1 MGP_129S1SvImJ_G0032156.1 mouse_genomes_project 7 44399624 44405122 - MGP_129S1SvImJ_P0083532 Acpt protein_coding protein_coding MGP_129S1SvImJ_T0083533.1 MGP_129S1SvImJ_G0032156.1 mouse_genomes_project 7 44400828 44405122 - MGP_129S1SvImJ_P0083533 Acpt protein_coding protein_coding MGP_129S1SvImJ_T0083534.1 MGP_129S1SvImJ_G0032156.1 mouse_genomes_project 7 44400835 44404949 - MGP_129S1SvImJ_P0083534 Acpt protein_coding protein_coding MGP_129S1SvImJ_T0102767.1 MGP_129S1SvImJ_G0040599.1 mouse_genomes_project 7 49223323 49224107 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0081787.1 MGP_129S1SvImJ_G0031714.1 mouse_genomes_project 7 14450591 14454711 + MGP_129S1SvImJ_P0081787 Ceacam9 protein_coding protein_coding MGP_129S1SvImJ_T0081788.1 MGP_129S1SvImJ_G0031714.1 mouse_genomes_project 7 14450620 14453794 + MGP_129S1SvImJ_P0081788 Ceacam9 protein_coding protein_coding MGP_129S1SvImJ_T0100047.1 MGP_129S1SvImJ_G0038114.1 mouse_genomes_project 7 26879426 26879532 + Gm24356 snRNA snRNA MGP_129S1SvImJ_T0084907.1 MGP_129S1SvImJ_G0032494.1 mouse_genomes_project 7 91544012 91754691 - MGP_129S1SvImJ_P0084907 Tmem135 protein_coding protein_coding MGP_129S1SvImJ_T0084908.1 MGP_129S1SvImJ_G0032494.1 mouse_genomes_project 7 91546145 91556193 - Tmem135 protein_coding retained_intron MGP_129S1SvImJ_T0084909.1 MGP_129S1SvImJ_G0032494.1 mouse_genomes_project 7 91550348 91754664 - MGP_129S1SvImJ_P0084909 Tmem135 protein_coding protein_coding MGP_129S1SvImJ_T0084910.1 MGP_129S1SvImJ_G0032494.1 mouse_genomes_project 7 91556019 91561521 - Tmem135 protein_coding processed_transcript MGP_129S1SvImJ_T0084911.1 MGP_129S1SvImJ_G0032494.1 mouse_genomes_project 7 91558351 91814195 - Tmem135 protein_coding processed_transcript MGP_129S1SvImJ_T0084912.1 MGP_129S1SvImJ_G0032494.1 mouse_genomes_project 7 91560881 91710204 - Tmem135 protein_coding processed_transcript MGP_129S1SvImJ_T0084913.1 MGP_129S1SvImJ_G0032494.1 mouse_genomes_project 7 91717193 91754595 - Tmem135 protein_coding retained_intron MGP_129S1SvImJ_T0084914.1 MGP_129S1SvImJ_G0032494.1 mouse_genomes_project 7 91718173 91754641 - MGP_129S1SvImJ_P0084914 Tmem135 protein_coding protein_coding MGP_129S1SvImJ_T0081725.1 MGP_129S1SvImJ_G0031698.1 mouse_genomes_project 7 13752820 13773495 + MGP_129S1SvImJ_P0081725 Napa protein_coding protein_coding MGP_129S1SvImJ_T0081726.1 MGP_129S1SvImJ_G0031698.1 mouse_genomes_project 7 13752973 13769056 + Napa protein_coding processed_transcript MGP_129S1SvImJ_T0081727.1 MGP_129S1SvImJ_G0031698.1 mouse_genomes_project 7 13752997 13768655 + Napa protein_coding retained_intron MGP_129S1SvImJ_T0081728.1 MGP_129S1SvImJ_G0031698.1 mouse_genomes_project 7 13753003 13764828 + Napa protein_coding processed_transcript MGP_129S1SvImJ_T0081729.1 MGP_129S1SvImJ_G0031698.1 mouse_genomes_project 7 13764569 13769746 + Napa protein_coding retained_intron MGP_129S1SvImJ_T0081730.1 MGP_129S1SvImJ_G0031698.1 mouse_genomes_project 7 13769164 13772079 + Napa protein_coding retained_intron MGP_129S1SvImJ_T0081731.1 MGP_129S1SvImJ_G0031698.1 mouse_genomes_project 7 13770623 13772259 + Napa protein_coding processed_transcript MGP_129S1SvImJ_T0009016.1 MGP_129S1SvImJ_G0007263.1 mouse_genomes_project 7 128822710 128918811 - 3100003L05Rik lincRNA lincRNA MGP_129S1SvImJ_T0081590.1 MGP_129S1SvImJ_G0031651.1 mouse_genomes_project 7 10149601 10162126 - MGP_129S1SvImJ_P0081590 Zscan18 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0086430.1 MGP_129S1SvImJ_G0032976.1 mouse_genomes_project 7 130632492 130639524 - MGP_129S1SvImJ_P0086430 Spns1 protein_coding protein_coding MGP_129S1SvImJ_T0086431.1 MGP_129S1SvImJ_G0032976.1 mouse_genomes_project 7 130632501 130639858 - Spns1 protein_coding retained_intron MGP_129S1SvImJ_T0086432.1 MGP_129S1SvImJ_G0032976.1 mouse_genomes_project 7 130632501 130639858 - MGP_129S1SvImJ_P0086432 Spns1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086433.1 MGP_129S1SvImJ_G0032976.1 mouse_genomes_project 7 130633181 130639476 - MGP_129S1SvImJ_P0086433 Spns1 protein_coding protein_coding MGP_129S1SvImJ_T0086434.1 MGP_129S1SvImJ_G0032976.1 mouse_genomes_project 7 130633666 130635366 - Spns1 protein_coding retained_intron MGP_129S1SvImJ_T0086435.1 MGP_129S1SvImJ_G0032976.1 mouse_genomes_project 7 130634026 130639542 - MGP_129S1SvImJ_P0086435 Spns1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086436.1 MGP_129S1SvImJ_G0032976.1 mouse_genomes_project 7 130634310 130635009 - Spns1 protein_coding retained_intron MGP_129S1SvImJ_T0086437.1 MGP_129S1SvImJ_G0032976.1 mouse_genomes_project 7 130635191 130639654 - MGP_129S1SvImJ_P0086437 Spns1 protein_coding protein_coding MGP_129S1SvImJ_T0086438.1 MGP_129S1SvImJ_G0032976.1 mouse_genomes_project 7 130636093 130636811 - Spns1 protein_coding retained_intron MGP_129S1SvImJ_T0086439.1 MGP_129S1SvImJ_G0032976.1 mouse_genomes_project 7 130636723 130639175 - Spns1 protein_coding processed_transcript MGP_129S1SvImJ_T0086440.1 MGP_129S1SvImJ_G0032976.1 mouse_genomes_project 7 130639144 130639868 - Spns1 protein_coding processed_transcript MGP_129S1SvImJ_T0010923.1 MGP_129S1SvImJ_G0009039.1 mouse_genomes_project 7 81391753 81391843 + Mir9-3 miRNA miRNA MGP_129S1SvImJ_T0083874.1 MGP_129S1SvImJ_G0032241.1 mouse_genomes_project 7 46013650 46018716 + MGP_129S1SvImJ_P0083874 Dbp protein_coding protein_coding MGP_129S1SvImJ_T0083875.1 MGP_129S1SvImJ_G0032241.1 mouse_genomes_project 7 46014185 46018675 + MGP_129S1SvImJ_P0083875 Dbp protein_coding protein_coding MGP_129S1SvImJ_T0083876.1 MGP_129S1SvImJ_G0032241.1 mouse_genomes_project 7 46014185 46018675 + MGP_129S1SvImJ_P0083876 Dbp protein_coding protein_coding MGP_129S1SvImJ_T0083877.1 MGP_129S1SvImJ_G0032241.1 mouse_genomes_project 7 46015664 46018589 + Dbp protein_coding retained_intron MGP_129S1SvImJ_T0083878.1 MGP_129S1SvImJ_G0032241.1 mouse_genomes_project 7 46016449 46018457 + Dbp protein_coding retained_intron MGP_129S1SvImJ_T0010861.1 MGP_129S1SvImJ_G0008977.1 mouse_genomes_project 7 17383033 17383108 + Mir343 miRNA miRNA MGP_129S1SvImJ_T0100089.1 MGP_129S1SvImJ_G0038156.1 mouse_genomes_project 7 128107720 128107826 - Gm23788 snRNA snRNA MGP_129S1SvImJ_T0082216.1 MGP_129S1SvImJ_G0031845.1 mouse_genomes_project 7 23280462 23287983 + MGP_129S1SvImJ_P0082216 Dmrtc2 protein_coding protein_coding MGP_129S1SvImJ_T0015797.1 MGP_129S1SvImJ_G0013886.1 mouse_genomes_project 7 42644757 42645268 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085705.1 MGP_129S1SvImJ_G0032764.1 mouse_genomes_project 7 109014122 109021481 - MGP_129S1SvImJ_P0085705 Tpp1 protein_coding protein_coding MGP_129S1SvImJ_T0083980.1 MGP_129S1SvImJ_G0032267.1 mouse_genomes_project 7 47074826 47101186 - MGP_129S1SvImJ_P0083980 Saal1 protein_coding protein_coding MGP_129S1SvImJ_T0083981.1 MGP_129S1SvImJ_G0032267.1 mouse_genomes_project 7 47077987 47099423 - Saal1 protein_coding retained_intron MGP_129S1SvImJ_T0083982.1 MGP_129S1SvImJ_G0032267.1 mouse_genomes_project 7 47078022 47101147 - Saal1 protein_coding retained_intron MGP_129S1SvImJ_T0083983.1 MGP_129S1SvImJ_G0032267.1 mouse_genomes_project 7 47078024 47078616 - Saal1 protein_coding processed_transcript MGP_129S1SvImJ_T0083984.1 MGP_129S1SvImJ_G0032267.1 mouse_genomes_project 7 47081473 47101164 - Saal1 protein_coding retained_intron MGP_129S1SvImJ_T0083985.1 MGP_129S1SvImJ_G0032267.1 mouse_genomes_project 7 47081895 47101167 - Saal1 protein_coding retained_intron MGP_129S1SvImJ_T0101999.1 MGP_129S1SvImJ_G0039859.1 mouse_genomes_project 7 109492843 109496436 - translated_unprocessed_pseudogene translated_unprocessed_pseudogene MGP_129S1SvImJ_T0083064.1 MGP_129S1SvImJ_G0032048.1 mouse_genomes_project 7 29888644 29892730 - MGP_129S1SvImJ_P0083064 Ffar1 protein_coding protein_coding MGP_129S1SvImJ_T0010847.1 MGP_129S1SvImJ_G0008963.1 mouse_genomes_project 7 96937 97019 + Mir294 miRNA miRNA MGP_129S1SvImJ_T0018438.1 MGP_129S1SvImJ_G0015683.1 mouse_genomes_project 7 109396107 109399224 + processed_transcript processed_transcript MGP_129S1SvImJ_T0101309.1 MGP_129S1SvImJ_G0039376.1 mouse_genomes_project 7 45361878 45361948 - Snord34 snoRNA snoRNA MGP_129S1SvImJ_T0101310.1 MGP_129S1SvImJ_G0039377.1 mouse_genomes_project 7 45362141 45362225 - Snord33 snoRNA snoRNA MGP_129S1SvImJ_T0002295.1 MGP_129S1SvImJ_G0002206.1 mouse_genomes_project 7 81155422 81158467 + TEC TEC MGP_129S1SvImJ_T0087792.1 MGP_129S1SvImJ_G0033266.1 mouse_genomes_project 7 148245399 148247842 - MGP_129S1SvImJ_P0087792 Ascl2 protein_coding protein_coding MGP_129S1SvImJ_T0087793.1 MGP_129S1SvImJ_G0033266.1 mouse_genomes_project 7 148245406 148247842 - MGP_129S1SvImJ_P0087793 Ascl2 protein_coding protein_coding MGP_129S1SvImJ_T0085723.1 MGP_129S1SvImJ_G0032774.1 mouse_genomes_project 7 110159383 110160334 - MGP_129S1SvImJ_P0085723 Olfr700 protein_coding protein_coding MGP_129S1SvImJ_T0085259.1 MGP_129S1SvImJ_G0032578.1 mouse_genomes_project 7 103792710 103856279 - MGP_129S1SvImJ_P0085259 Arhgef17 protein_coding protein_coding MGP_129S1SvImJ_T0085260.1 MGP_129S1SvImJ_G0032578.1 mouse_genomes_project 7 103792740 103817582 - MGP_129S1SvImJ_P0085260 Arhgef17 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0083809.1 MGP_129S1SvImJ_G0032223.1 mouse_genomes_project 7 45721127 45724303 - protein_coding retained_intron MGP_129S1SvImJ_T0086317.1 MGP_129S1SvImJ_G0032958.1 mouse_genomes_project 7 127081550 127095355 + MGP_129S1SvImJ_P0086317 Rbbp6 protein_coding protein_coding MGP_129S1SvImJ_T0086318.1 MGP_129S1SvImJ_G0032958.1 mouse_genomes_project 7 127089910 127121939 + MGP_129S1SvImJ_P0086318 Rbbp6 protein_coding protein_coding MGP_129S1SvImJ_T0086319.1 MGP_129S1SvImJ_G0032958.1 mouse_genomes_project 7 127090046 127103739 + MGP_129S1SvImJ_P0086319 Rbbp6 protein_coding protein_coding MGP_129S1SvImJ_T0086320.1 MGP_129S1SvImJ_G0032958.1 mouse_genomes_project 7 127090264 127121939 + MGP_129S1SvImJ_P0086320 Rbbp6 protein_coding protein_coding MGP_129S1SvImJ_T0086321.1 MGP_129S1SvImJ_G0032958.1 mouse_genomes_project 7 127094986 127098108 + Rbbp6 protein_coding retained_intron MGP_129S1SvImJ_T0086322.1 MGP_129S1SvImJ_G0032958.1 mouse_genomes_project 7 127095204 127102903 + Rbbp6 protein_coding retained_intron MGP_129S1SvImJ_T0086323.1 MGP_129S1SvImJ_G0032958.1 mouse_genomes_project 7 127101850 127121941 + MGP_129S1SvImJ_P0086323 Rbbp6 protein_coding protein_coding MGP_129S1SvImJ_T0086324.1 MGP_129S1SvImJ_G0032958.1 mouse_genomes_project 7 127101888 127105049 + Rbbp6 protein_coding retained_intron MGP_129S1SvImJ_T0086325.1 MGP_129S1SvImJ_G0032958.1 mouse_genomes_project 7 127109476 127111859 + Rbbp6 protein_coding retained_intron MGP_129S1SvImJ_T0011707.1 MGP_129S1SvImJ_G0009823.1 mouse_genomes_project 7 76604548 76604899 - Gm22326 misc_RNA misc_RNA MGP_129S1SvImJ_T0081945.1 MGP_129S1SvImJ_G0031763.1 mouse_genomes_project 7 17119456 17129331 - MGP_129S1SvImJ_P0081945 Gipr protein_coding protein_coding MGP_129S1SvImJ_T0081946.1 MGP_129S1SvImJ_G0031763.1 mouse_genomes_project 7 17119459 17129331 - Gipr protein_coding retained_intron MGP_129S1SvImJ_T0081947.1 MGP_129S1SvImJ_G0031763.1 mouse_genomes_project 7 17125491 17129331 - MGP_129S1SvImJ_P0081947 Gipr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081948.1 MGP_129S1SvImJ_G0031763.1 mouse_genomes_project 7 17125658 17128294 - Gipr protein_coding retained_intron MGP_129S1SvImJ_T0018458.1 MGP_129S1SvImJ_G0015695.1 mouse_genomes_project 7 132892039 132905456 + Gm45019 processed_transcript lincRNA MGP_129S1SvImJ_T0018459.1 MGP_129S1SvImJ_G0015695.1 mouse_genomes_project 7 132904108 132905455 + Gm45019 processed_transcript retained_intron MGP_129S1SvImJ_T0085757.1 MGP_129S1SvImJ_G0032800.1 mouse_genomes_project 7 111124380 111144740 - MGP_129S1SvImJ_P0085757 Ovch2 protein_coding protein_coding MGP_129S1SvImJ_T0084342.1 MGP_129S1SvImJ_G0032357.1 mouse_genomes_project 7 68471455 68477385 + MGP_129S1SvImJ_P0084342 Lysmd4 protein_coding protein_coding MGP_129S1SvImJ_T0084343.1 MGP_129S1SvImJ_G0032357.1 mouse_genomes_project 7 68471527 68477385 + MGP_129S1SvImJ_P0084343 Lysmd4 protein_coding protein_coding MGP_129S1SvImJ_T0018465.1 MGP_129S1SvImJ_G0015699.1 mouse_genomes_project 7 146544240 146551278 - B230206H07Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018466.1 MGP_129S1SvImJ_G0015699.1 mouse_genomes_project 7 146544277 146551306 - B230206H07Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0082366.1 MGP_129S1SvImJ_G0031876.1 mouse_genomes_project 7 24194812 24212884 + MGP_129S1SvImJ_P0082366 Tgfb1 protein_coding protein_coding MGP_129S1SvImJ_T0082367.1 MGP_129S1SvImJ_G0031876.1 mouse_genomes_project 7 24195958 24196535 + Tgfb1 protein_coding processed_transcript MGP_129S1SvImJ_T0082368.1 MGP_129S1SvImJ_G0031876.1 mouse_genomes_project 7 24196700 24199273 + Tgfb1 protein_coding retained_intron MGP_129S1SvImJ_T0082369.1 MGP_129S1SvImJ_G0031876.1 mouse_genomes_project 7 24196737 24205036 + MGP_129S1SvImJ_P0082369 Tgfb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082370.1 MGP_129S1SvImJ_G0031876.1 mouse_genomes_project 7 24200240 24204997 + Tgfb1 protein_coding retained_intron MGP_129S1SvImJ_T0083461.1 MGP_129S1SvImJ_G0032128.1 mouse_genomes_project 7 43486693 43503769 - MGP_129S1SvImJ_P0083461 Iglon5 protein_coding protein_coding MGP_129S1SvImJ_T0083462.1 MGP_129S1SvImJ_G0032128.1 mouse_genomes_project 7 43487959 43492060 - MGP_129S1SvImJ_P0083462 Iglon5 protein_coding protein_coding MGP_129S1SvImJ_T0084199.1 MGP_129S1SvImJ_G0032330.1 mouse_genomes_project 7 64149557 64269492 - MGP_129S1SvImJ_P0084199 Chrna7 protein_coding protein_coding MGP_129S1SvImJ_T0015761.1 MGP_129S1SvImJ_G0013850.1 mouse_genomes_project 7 24773483 24791940 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082707.1 MGP_129S1SvImJ_G0031966.1 mouse_genomes_project 7 27759832 27771356 + MGP_129S1SvImJ_P0082707 Capn12 protein_coding protein_coding MGP_129S1SvImJ_T0005210.1 MGP_129S1SvImJ_G0004437.1 mouse_genomes_project 7 30011993 30016204 + Gm4673 antisense antisense MGP_129S1SvImJ_T0005233.1 MGP_129S1SvImJ_G0004453.1 mouse_genomes_project 7 45836277 45837352 - antisense antisense MGP_129S1SvImJ_T0085482.1 MGP_129S1SvImJ_G0032651.1 mouse_genomes_project 7 106411784 106412723 + MGP_129S1SvImJ_P0085482 protein_coding protein_coding MGP_129S1SvImJ_T0087786.1 MGP_129S1SvImJ_G0033265.1 mouse_genomes_project 7 148166951 148206479 - MGP_129S1SvImJ_P0087786 Th protein_coding protein_coding MGP_129S1SvImJ_T0087787.1 MGP_129S1SvImJ_G0033265.1 mouse_genomes_project 7 148166951 148174213 - MGP_129S1SvImJ_P0087787 Th protein_coding protein_coding MGP_129S1SvImJ_T0087788.1 MGP_129S1SvImJ_G0033265.1 mouse_genomes_project 7 148167165 148174160 - MGP_129S1SvImJ_P0087788 Th protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087789.1 MGP_129S1SvImJ_G0033265.1 mouse_genomes_project 7 148168605 148170808 - MGP_129S1SvImJ_P0087789 Th protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087790.1 MGP_129S1SvImJ_G0033265.1 mouse_genomes_project 7 148168633 148174165 - MGP_129S1SvImJ_P0087790 Th protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087791.1 MGP_129S1SvImJ_G0033265.1 mouse_genomes_project 7 148170796 148206471 - MGP_129S1SvImJ_P0087791 Th protein_coding protein_coding MGP_129S1SvImJ_T0015759.1 MGP_129S1SvImJ_G0013848.1 mouse_genomes_project 7 24404406 24404758 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082259.1 MGP_129S1SvImJ_G0031852.1 mouse_genomes_project 7 23430785 23497135 - MGP_129S1SvImJ_P0082259 Grik5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082260.1 MGP_129S1SvImJ_G0031852.1 mouse_genomes_project 7 23430785 23497380 - MGP_129S1SvImJ_P0082260 Grik5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082261.1 MGP_129S1SvImJ_G0031852.1 mouse_genomes_project 7 23430785 23497326 - MGP_129S1SvImJ_P0082261 Grik5 protein_coding protein_coding MGP_129S1SvImJ_T0082262.1 MGP_129S1SvImJ_G0031852.1 mouse_genomes_project 7 23470159 23484567 - Grik5 protein_coding retained_intron MGP_129S1SvImJ_T0082263.1 MGP_129S1SvImJ_G0031852.1 mouse_genomes_project 7 23485247 23490207 - Grik5 protein_coding retained_intron MGP_129S1SvImJ_T0082264.1 MGP_129S1SvImJ_G0031852.1 mouse_genomes_project 7 23485432 23486130 - Grik5 protein_coding retained_intron MGP_129S1SvImJ_T0082265.1 MGP_129S1SvImJ_G0031852.1 mouse_genomes_project 7 23493577 23497344 - Grik5 protein_coding processed_transcript MGP_129S1SvImJ_T0081452.1 MGP_129S1SvImJ_G0031572.1 mouse_genomes_project 7 1918368 1924236 - MGP_129S1SvImJ_P0081452 Sbk3 protein_coding protein_coding MGP_129S1SvImJ_T0081453.1 MGP_129S1SvImJ_G0031572.1 mouse_genomes_project 7 1920635 1924443 - MGP_129S1SvImJ_P0081453 Sbk3 protein_coding protein_coding MGP_129S1SvImJ_T0018429.1 MGP_129S1SvImJ_G0015679.1 mouse_genomes_project 7 86869105 86949498 + 2610206C17Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018430.1 MGP_129S1SvImJ_G0015679.1 mouse_genomes_project 7 86948651 86948969 + 2610206C17Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0084198.1 MGP_129S1SvImJ_G0032329.1 mouse_genomes_project 7 63550436 63552941 - MGP_129S1SvImJ_P0084198 Peg12 protein_coding protein_coding MGP_129S1SvImJ_T0084869.1 MGP_129S1SvImJ_G0032472.1 mouse_genomes_project 7 88577973 88579029 - MGP_129S1SvImJ_P0084869 Olfr308 protein_coding protein_coding MGP_129S1SvImJ_T0005237.1 MGP_129S1SvImJ_G0004456.1 mouse_genomes_project 7 51200784 51265325 - Nell1os antisense antisense MGP_129S1SvImJ_T0005238.1 MGP_129S1SvImJ_G0004456.1 mouse_genomes_project 7 51224997 51265412 - Nell1os antisense antisense MGP_129S1SvImJ_T0005239.1 MGP_129S1SvImJ_G0004456.1 mouse_genomes_project 7 51246559 51262389 - Nell1os antisense antisense MGP_129S1SvImJ_T0015793.1 MGP_129S1SvImJ_G0013882.1 mouse_genomes_project 7 41466834 41467484 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082487.1 MGP_129S1SvImJ_G0031908.1 mouse_genomes_project 7 25982478 25998814 - MGP_129S1SvImJ_P0082487 Shkbp1 protein_coding protein_coding MGP_129S1SvImJ_T0082488.1 MGP_129S1SvImJ_G0031908.1 mouse_genomes_project 7 25982482 25998749 - Shkbp1 protein_coding retained_intron MGP_129S1SvImJ_T0082489.1 MGP_129S1SvImJ_G0031908.1 mouse_genomes_project 7 25982482 25998538 - Shkbp1 protein_coding retained_intron MGP_129S1SvImJ_T0082490.1 MGP_129S1SvImJ_G0031908.1 mouse_genomes_project 7 25982483 25985932 - Shkbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0082491.1 MGP_129S1SvImJ_G0031908.1 mouse_genomes_project 7 25982757 25983267 - Shkbp1 protein_coding retained_intron MGP_129S1SvImJ_T0082492.1 MGP_129S1SvImJ_G0031908.1 mouse_genomes_project 7 25983501 25988755 - Shkbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0082493.1 MGP_129S1SvImJ_G0031908.1 mouse_genomes_project 7 25985308 25987782 - Shkbp1 protein_coding retained_intron MGP_129S1SvImJ_T0082494.1 MGP_129S1SvImJ_G0031908.1 mouse_genomes_project 7 25988427 25991061 - Shkbp1 protein_coding retained_intron MGP_129S1SvImJ_T0082495.1 MGP_129S1SvImJ_G0031908.1 mouse_genomes_project 7 25994480 25998554 - Shkbp1 protein_coding retained_intron MGP_129S1SvImJ_T0082496.1 MGP_129S1SvImJ_G0031908.1 mouse_genomes_project 7 25994521 25998717 - Shkbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0082498.1 MGP_129S1SvImJ_G0031908.1 mouse_genomes_project 7 25996873 25998566 - Shkbp1 protein_coding retained_intron MGP_129S1SvImJ_T0085472.1 MGP_129S1SvImJ_G0032643.1 mouse_genomes_project 7 106254121 106255066 - MGP_129S1SvImJ_P0085472 Olfr591 protein_coding protein_coding MGP_129S1SvImJ_T0086448.1 MGP_129S1SvImJ_G0032979.1 mouse_genomes_project 7 130700024 130719986 + Rabep2 protein_coding retained_intron MGP_129S1SvImJ_T0086449.1 MGP_129S1SvImJ_G0032979.1 mouse_genomes_project 7 130700343 130719994 + MGP_129S1SvImJ_P0086449 Rabep2 protein_coding protein_coding MGP_129S1SvImJ_T0086450.1 MGP_129S1SvImJ_G0032979.1 mouse_genomes_project 7 130700364 130709114 + Rabep2 protein_coding retained_intron MGP_129S1SvImJ_T0086451.1 MGP_129S1SvImJ_G0032979.1 mouse_genomes_project 7 130700647 130711393 + MGP_129S1SvImJ_P0086451 Rabep2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086452.1 MGP_129S1SvImJ_G0032979.1 mouse_genomes_project 7 130700693 130711384 + MGP_129S1SvImJ_P0086452 Rabep2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086453.1 MGP_129S1SvImJ_G0032979.1 mouse_genomes_project 7 130711152 130711716 + Rabep2 protein_coding retained_intron MGP_129S1SvImJ_T0086454.1 MGP_129S1SvImJ_G0032979.1 mouse_genomes_project 7 130713269 130718769 + Rabep2 protein_coding retained_intron MGP_129S1SvImJ_T0086455.1 MGP_129S1SvImJ_G0032979.1 mouse_genomes_project 7 130718884 130723330 + Rabep2 protein_coding retained_intron MGP_129S1SvImJ_T0084435.1 MGP_129S1SvImJ_G0032375.1 mouse_genomes_project 7 77543584 77577533 + MGP_129S1SvImJ_P0084435 Klhl25 protein_coding protein_coding MGP_129S1SvImJ_T0084436.1 MGP_129S1SvImJ_G0032375.1 mouse_genomes_project 7 77543612 77577532 + MGP_129S1SvImJ_P0084436 Klhl25 protein_coding protein_coding MGP_129S1SvImJ_T0084437.1 MGP_129S1SvImJ_G0032375.1 mouse_genomes_project 7 77543615 77570691 + MGP_129S1SvImJ_P0084437 Klhl25 protein_coding protein_coding MGP_129S1SvImJ_T0084438.1 MGP_129S1SvImJ_G0032375.1 mouse_genomes_project 7 77543638 77570687 + MGP_129S1SvImJ_P0084438 Klhl25 protein_coding protein_coding MGP_129S1SvImJ_T0084439.1 MGP_129S1SvImJ_G0032375.1 mouse_genomes_project 7 77543671 77576927 + Klhl25 protein_coding processed_transcript MGP_129S1SvImJ_T0084440.1 MGP_129S1SvImJ_G0032375.1 mouse_genomes_project 7 77543715 77568827 + MGP_129S1SvImJ_P0084440 Klhl25 protein_coding protein_coding MGP_129S1SvImJ_T0101968.1 MGP_129S1SvImJ_G0039847.1 mouse_genomes_project 7 15440882 15450244 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101969.1 MGP_129S1SvImJ_G0039847.1 mouse_genomes_project 7 15440882 15450613 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0082316.1 MGP_129S1SvImJ_G0031864.1 mouse_genomes_project 7 23833076 23835160 - MGP_129S1SvImJ_P0082316 Cnfn protein_coding protein_coding MGP_129S1SvImJ_T0082317.1 MGP_129S1SvImJ_G0031864.1 mouse_genomes_project 7 23833078 23835181 - MGP_129S1SvImJ_P0082317 Cnfn protein_coding protein_coding MGP_129S1SvImJ_T0009030.1 MGP_129S1SvImJ_G0007273.1 mouse_genomes_project 7 131283400 131287189 - lincRNA lincRNA MGP_129S1SvImJ_T0009031.1 MGP_129S1SvImJ_G0007273.1 mouse_genomes_project 7 131284303 131287498 - lincRNA lincRNA MGP_129S1SvImJ_T0009032.1 MGP_129S1SvImJ_G0007273.1 mouse_genomes_project 7 131284303 131287516 - lincRNA lincRNA MGP_129S1SvImJ_T0009033.1 MGP_129S1SvImJ_G0007273.1 mouse_genomes_project 7 131284303 131287777 - lincRNA lincRNA MGP_129S1SvImJ_T0009034.1 MGP_129S1SvImJ_G0007273.1 mouse_genomes_project 7 131284304 131287467 - lincRNA lincRNA MGP_129S1SvImJ_T0009035.1 MGP_129S1SvImJ_G0007273.1 mouse_genomes_project 7 131284305 131287525 - lincRNA lincRNA MGP_129S1SvImJ_T0009036.1 MGP_129S1SvImJ_G0007273.1 mouse_genomes_project 7 131286532 131287731 - lincRNA lincRNA MGP_129S1SvImJ_T0085262.1 MGP_129S1SvImJ_G0032580.1 mouse_genomes_project 7 103930146 103945777 - MGP_129S1SvImJ_P0085262 P2ry2 protein_coding protein_coding MGP_129S1SvImJ_T0085263.1 MGP_129S1SvImJ_G0032580.1 mouse_genomes_project 7 103930799 103945762 - MGP_129S1SvImJ_P0085263 P2ry2 protein_coding protein_coding MGP_129S1SvImJ_T0086588.1 MGP_129S1SvImJ_G0033000.1 mouse_genomes_project 7 131093580 131097601 - MGP_129S1SvImJ_P0086588 Aldoa protein_coding protein_coding MGP_129S1SvImJ_T0086589.1 MGP_129S1SvImJ_G0033000.1 mouse_genomes_project 7 131093581 131099236 - MGP_129S1SvImJ_P0086589 Aldoa protein_coding protein_coding MGP_129S1SvImJ_T0086590.1 MGP_129S1SvImJ_G0033000.1 mouse_genomes_project 7 131093582 131097488 - MGP_129S1SvImJ_P0086590 Aldoa protein_coding protein_coding MGP_129S1SvImJ_T0086591.1 MGP_129S1SvImJ_G0033000.1 mouse_genomes_project 7 131094258 131096629 - Aldoa protein_coding processed_transcript MGP_129S1SvImJ_T0086592.1 MGP_129S1SvImJ_G0033000.1 mouse_genomes_project 7 131094295 131096654 - Aldoa protein_coding retained_intron MGP_129S1SvImJ_T0086593.1 MGP_129S1SvImJ_G0033000.1 mouse_genomes_project 7 131094295 131096098 - Aldoa protein_coding retained_intron MGP_129S1SvImJ_T0086594.1 MGP_129S1SvImJ_G0033000.1 mouse_genomes_project 7 131094385 131098835 - MGP_129S1SvImJ_P0086594 Aldoa protein_coding protein_coding MGP_129S1SvImJ_T0086595.1 MGP_129S1SvImJ_G0033000.1 mouse_genomes_project 7 131094617 131097340 - MGP_129S1SvImJ_P0086595 Aldoa protein_coding protein_coding MGP_129S1SvImJ_T0086596.1 MGP_129S1SvImJ_G0033000.1 mouse_genomes_project 7 131094828 131097517 - Aldoa protein_coding retained_intron MGP_129S1SvImJ_T0086597.1 MGP_129S1SvImJ_G0033000.1 mouse_genomes_project 7 131095014 131097456 - MGP_129S1SvImJ_P0086597 Aldoa protein_coding protein_coding MGP_129S1SvImJ_T0086598.1 MGP_129S1SvImJ_G0033000.1 mouse_genomes_project 7 131095064 131098825 - MGP_129S1SvImJ_P0086598 Aldoa protein_coding protein_coding MGP_129S1SvImJ_T0086599.1 MGP_129S1SvImJ_G0033000.1 mouse_genomes_project 7 131095186 131099540 - MGP_129S1SvImJ_P0086599 Aldoa protein_coding protein_coding MGP_129S1SvImJ_T0082217.1 MGP_129S1SvImJ_G0031846.1 mouse_genomes_project 7 23294670 23300104 + MGP_129S1SvImJ_P0082217 Rps19 protein_coding protein_coding MGP_129S1SvImJ_T0082218.1 MGP_129S1SvImJ_G0031846.1 mouse_genomes_project 7 23294932 23300104 + MGP_129S1SvImJ_P0082218 Rps19 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082219.1 MGP_129S1SvImJ_G0031846.1 mouse_genomes_project 7 23294934 23298059 + Rps19 protein_coding retained_intron MGP_129S1SvImJ_T0082220.1 MGP_129S1SvImJ_G0031846.1 mouse_genomes_project 7 23294935 23300100 + MGP_129S1SvImJ_P0082220 Rps19 protein_coding protein_coding MGP_129S1SvImJ_T0082221.1 MGP_129S1SvImJ_G0031846.1 mouse_genomes_project 7 23294950 23299250 + MGP_129S1SvImJ_P0082221 Rps19 protein_coding protein_coding MGP_129S1SvImJ_T0082222.1 MGP_129S1SvImJ_G0031846.1 mouse_genomes_project 7 23295013 23300104 + MGP_129S1SvImJ_P0082222 Rps19 protein_coding protein_coding MGP_129S1SvImJ_T0082223.1 MGP_129S1SvImJ_G0031846.1 mouse_genomes_project 7 23295112 23299230 + MGP_129S1SvImJ_P0082223 Rps19 protein_coding protein_coding MGP_129S1SvImJ_T0082224.1 MGP_129S1SvImJ_G0031846.1 mouse_genomes_project 7 23295216 23299272 + MGP_129S1SvImJ_P0082224 Rps19 protein_coding protein_coding MGP_129S1SvImJ_T0082225.1 MGP_129S1SvImJ_G0031846.1 mouse_genomes_project 7 23298489 23300102 + Rps19 protein_coding retained_intron MGP_129S1SvImJ_T0082226.1 MGP_129S1SvImJ_G0031846.1 mouse_genomes_project 7 23299039 23300102 + Rps19 protein_coding processed_transcript MGP_129S1SvImJ_T0086515.1 MGP_129S1SvImJ_G0032990.1 mouse_genomes_project 7 130932950 130947573 + Sgf29 protein_coding processed_transcript MGP_129S1SvImJ_T0086516.1 MGP_129S1SvImJ_G0032990.1 mouse_genomes_project 7 130932950 130956493 + MGP_129S1SvImJ_P0086516 Sgf29 protein_coding protein_coding MGP_129S1SvImJ_T0086517.1 MGP_129S1SvImJ_G0032990.1 mouse_genomes_project 7 130932953 130948519 + MGP_129S1SvImJ_P0086517 Sgf29 protein_coding protein_coding MGP_129S1SvImJ_T0086518.1 MGP_129S1SvImJ_G0032990.1 mouse_genomes_project 7 130932963 130947668 + Sgf29 protein_coding retained_intron MGP_129S1SvImJ_T0086519.1 MGP_129S1SvImJ_G0032990.1 mouse_genomes_project 7 130932988 130955449 + Sgf29 protein_coding retained_intron MGP_129S1SvImJ_T0086520.1 MGP_129S1SvImJ_G0032990.1 mouse_genomes_project 7 130933043 130955807 + MGP_129S1SvImJ_P0086520 Sgf29 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086521.1 MGP_129S1SvImJ_G0032990.1 mouse_genomes_project 7 130944640 130955886 + MGP_129S1SvImJ_P0086521 Sgf29 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086522.1 MGP_129S1SvImJ_G0032990.1 mouse_genomes_project 7 130947361 130954256 + Sgf29 protein_coding retained_intron MGP_129S1SvImJ_T0086523.1 MGP_129S1SvImJ_G0032990.1 mouse_genomes_project 7 130955144 130955960 + MGP_129S1SvImJ_P0086523 Sgf29 protein_coding protein_coding MGP_129S1SvImJ_T0086524.1 MGP_129S1SvImJ_G0032990.1 mouse_genomes_project 7 130955598 130956347 + Sgf29 protein_coding processed_transcript MGP_129S1SvImJ_T0002264.1 MGP_129S1SvImJ_G0002176.1 mouse_genomes_project 7 65067962 65069493 + TEC TEC MGP_129S1SvImJ_T0002335.1 MGP_129S1SvImJ_G0002246.1 mouse_genomes_project 7 132173021 132177305 - TEC TEC MGP_129S1SvImJ_T0102788.1 MGP_129S1SvImJ_G0040620.1 mouse_genomes_project 7 88275969 88276807 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0087355.1 MGP_129S1SvImJ_G0033159.1 mouse_genomes_project 7 145112872 145117087 + MGP_129S1SvImJ_P0087355 Zfp511 protein_coding protein_coding MGP_129S1SvImJ_T0015901.1 MGP_129S1SvImJ_G0013990.1 mouse_genomes_project 7 114022185 114022515 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011698.1 MGP_129S1SvImJ_G0009814.1 mouse_genomes_project 7 10732899 10733179 + Gm24909 misc_RNA misc_RNA MGP_129S1SvImJ_T0008846.1 MGP_129S1SvImJ_G0007149.1 mouse_genomes_project 7 35248490 35249801 + Gm28514 lincRNA lincRNA MGP_129S1SvImJ_T0102803.1 MGP_129S1SvImJ_G0040635.1 mouse_genomes_project 7 106247330 106248183 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0081567.1 MGP_129S1SvImJ_G0031634.1 mouse_genomes_project 7 9122035 9122947 + MGP_129S1SvImJ_P0081567 Vmn1r73 protein_coding protein_coding MGP_129S1SvImJ_T0002271.1 MGP_129S1SvImJ_G0002183.1 mouse_genomes_project 7 66540675 66541086 - TEC TEC MGP_129S1SvImJ_T0087346.1 MGP_129S1SvImJ_G0033157.1 mouse_genomes_project 7 145054638 145070946 - Adam8 protein_coding retained_intron MGP_129S1SvImJ_T0087347.1 MGP_129S1SvImJ_G0033157.1 mouse_genomes_project 7 145054638 145066830 - Adam8 protein_coding retained_intron MGP_129S1SvImJ_T0087348.1 MGP_129S1SvImJ_G0033157.1 mouse_genomes_project 7 145054638 145070946 - MGP_129S1SvImJ_P0087348 Adam8 protein_coding protein_coding MGP_129S1SvImJ_T0087349.1 MGP_129S1SvImJ_G0033157.1 mouse_genomes_project 7 145054638 145070932 - MGP_129S1SvImJ_P0087349 Adam8 protein_coding protein_coding MGP_129S1SvImJ_T0087350.1 MGP_129S1SvImJ_G0033157.1 mouse_genomes_project 7 145055100 145056075 - Adam8 protein_coding processed_transcript MGP_129S1SvImJ_T0087351.1 MGP_129S1SvImJ_G0033157.1 mouse_genomes_project 7 145062249 145070946 - MGP_129S1SvImJ_P0087351 Adam8 protein_coding protein_coding MGP_129S1SvImJ_T0087352.1 MGP_129S1SvImJ_G0033157.1 mouse_genomes_project 7 145066049 145066826 - Adam8 protein_coding processed_transcript MGP_129S1SvImJ_T0087353.1 MGP_129S1SvImJ_G0033157.1 mouse_genomes_project 7 145067814 145070892 - MGP_129S1SvImJ_P0087353 Adam8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086075.1 MGP_129S1SvImJ_G0032895.1 mouse_genomes_project 7 121928630 121940751 - MGP_129S1SvImJ_P0086075 Arl6ip1 protein_coding protein_coding MGP_129S1SvImJ_T0086076.1 MGP_129S1SvImJ_G0032895.1 mouse_genomes_project 7 121929997 121940197 - Arl6ip1 protein_coding processed_transcript MGP_129S1SvImJ_T0086077.1 MGP_129S1SvImJ_G0032895.1 mouse_genomes_project 7 121930045 121940665 - MGP_129S1SvImJ_P0086077 Arl6ip1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086078.1 MGP_129S1SvImJ_G0032895.1 mouse_genomes_project 7 121930940 121940663 - MGP_129S1SvImJ_P0086078 Arl6ip1 protein_coding protein_coding MGP_129S1SvImJ_T0086079.1 MGP_129S1SvImJ_G0032895.1 mouse_genomes_project 7 121930967 121940649 - MGP_129S1SvImJ_P0086079 Arl6ip1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086080.1 MGP_129S1SvImJ_G0032895.1 mouse_genomes_project 7 121937419 121940661 - Arl6ip1 protein_coding retained_intron MGP_129S1SvImJ_T0081424.1 MGP_129S1SvImJ_G0031561.1 mouse_genomes_project 7 1722203 1723607 + MGP_129S1SvImJ_P0081424 Tmem190 protein_coding protein_coding MGP_129S1SvImJ_T0081425.1 MGP_129S1SvImJ_G0031561.1 mouse_genomes_project 7 1722217 1722623 + Tmem190 protein_coding retained_intron MGP_129S1SvImJ_T0086065.1 MGP_129S1SvImJ_G0032893.1 mouse_genomes_project 7 121161307 121427160 + Xylt1 protein_coding retained_intron MGP_129S1SvImJ_T0086066.1 MGP_129S1SvImJ_G0032893.1 mouse_genomes_project 7 121161307 121461937 + MGP_129S1SvImJ_P0086066 Xylt1 protein_coding protein_coding MGP_129S1SvImJ_T0086067.1 MGP_129S1SvImJ_G0032893.1 mouse_genomes_project 7 121264683 121339775 + Xylt1 protein_coding retained_intron MGP_129S1SvImJ_T0011709.1 MGP_129S1SvImJ_G0009825.1 mouse_genomes_project 7 81224878 81225136 - Gm24224 misc_RNA misc_RNA MGP_129S1SvImJ_T0081697.1 MGP_129S1SvImJ_G0031685.1 mouse_genomes_project 7 12130904 12132568 - MGP_129S1SvImJ_P0081697 Vmn1r90 protein_coding protein_coding MGP_129S1SvImJ_T0086238.1 MGP_129S1SvImJ_G0032937.1 mouse_genomes_project 7 124996720 125030413 + MGP_129S1SvImJ_P0086238 Mfsd13b protein_coding protein_coding MGP_129S1SvImJ_T0086239.1 MGP_129S1SvImJ_G0032937.1 mouse_genomes_project 7 124996736 125005694 + MGP_129S1SvImJ_P0086239 Mfsd13b protein_coding protein_coding MGP_129S1SvImJ_T0086240.1 MGP_129S1SvImJ_G0032937.1 mouse_genomes_project 7 124996739 125003289 + MGP_129S1SvImJ_P0086240 Mfsd13b protein_coding protein_coding MGP_129S1SvImJ_T0086241.1 MGP_129S1SvImJ_G0032937.1 mouse_genomes_project 7 125006048 125030413 + MGP_129S1SvImJ_P0086241 Mfsd13b protein_coding protein_coding MGP_129S1SvImJ_T0085512.1 MGP_129S1SvImJ_G0032681.1 mouse_genomes_project 7 106992294 106993257 - MGP_129S1SvImJ_P0085512 Olfr67 protein_coding protein_coding MGP_129S1SvImJ_T0084208.1 MGP_129S1SvImJ_G0032333.1 mouse_genomes_project 7 65033624 65037311 + MGP_129S1SvImJ_P0084208 E030018B13Rik protein_coding protein_coding MGP_129S1SvImJ_T0085437.1 MGP_129S1SvImJ_G0032611.1 mouse_genomes_project 7 105543943 105548353 - MGP_129S1SvImJ_P0085437 protein_coding protein_coding MGP_129S1SvImJ_T0102677.1 MGP_129S1SvImJ_G0040510.1 mouse_genomes_project 7 9216283 9216675 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0086509.1 MGP_129S1SvImJ_G0032989.1 mouse_genomes_project 7 130907427 130909855 - MGP_129S1SvImJ_P0086509 Nupr1 protein_coding protein_coding MGP_129S1SvImJ_T0086510.1 MGP_129S1SvImJ_G0032989.1 mouse_genomes_project 7 130907430 130911189 - Nupr1 protein_coding retained_intron MGP_129S1SvImJ_T0086511.1 MGP_129S1SvImJ_G0032989.1 mouse_genomes_project 7 130907456 130909523 - MGP_129S1SvImJ_P0086511 Nupr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086512.1 MGP_129S1SvImJ_G0032989.1 mouse_genomes_project 7 130907620 130909654 - MGP_129S1SvImJ_P0086512 Nupr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086513.1 MGP_129S1SvImJ_G0032989.1 mouse_genomes_project 7 130909126 130914815 - Nupr1 protein_coding processed_transcript MGP_129S1SvImJ_T0086514.1 MGP_129S1SvImJ_G0032989.1 mouse_genomes_project 7 130909126 130910195 - Nupr1 protein_coding processed_transcript MGP_129S1SvImJ_T0101331.1 MGP_129S1SvImJ_G0039398.1 mouse_genomes_project 7 90723340 90723473 + Gm25345 snoRNA snoRNA MGP_129S1SvImJ_T0084792.1 MGP_129S1SvImJ_G0032442.1 mouse_genomes_project 7 84276477 84388945 + MGP_129S1SvImJ_P0084792 Sh3gl3 protein_coding protein_coding MGP_129S1SvImJ_T0084793.1 MGP_129S1SvImJ_G0032442.1 mouse_genomes_project 7 84277124 84374843 + Sh3gl3 protein_coding retained_intron MGP_129S1SvImJ_T0084794.1 MGP_129S1SvImJ_G0032442.1 mouse_genomes_project 7 84277138 84412340 + MGP_129S1SvImJ_P0084794 Sh3gl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084795.1 MGP_129S1SvImJ_G0032442.1 mouse_genomes_project 7 84277232 84412340 + MGP_129S1SvImJ_P0084795 Sh3gl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084796.1 MGP_129S1SvImJ_G0032442.1 mouse_genomes_project 7 84277257 84412339 + MGP_129S1SvImJ_P0084796 Sh3gl3 protein_coding protein_coding MGP_129S1SvImJ_T0084797.1 MGP_129S1SvImJ_G0032442.1 mouse_genomes_project 7 84277438 84389008 + MGP_129S1SvImJ_P0084797 Sh3gl3 protein_coding protein_coding MGP_129S1SvImJ_T0084798.1 MGP_129S1SvImJ_G0032442.1 mouse_genomes_project 7 84277516 84278586 + Sh3gl3 protein_coding processed_transcript MGP_129S1SvImJ_T0084799.1 MGP_129S1SvImJ_G0032442.1 mouse_genomes_project 7 84375686 84412149 + MGP_129S1SvImJ_P0084799 Sh3gl3 protein_coding protein_coding MGP_129S1SvImJ_T0010856.1 MGP_129S1SvImJ_G0008972.1 mouse_genomes_project 7 8665455 8665531 - Mir297-1 miRNA miRNA MGP_129S1SvImJ_T0087401.1 MGP_129S1SvImJ_G0033176.1 mouse_genomes_project 7 145478311 145479391 - MGP_129S1SvImJ_P0087401 Olfr530 protein_coding protein_coding MGP_129S1SvImJ_T0102717.1 MGP_129S1SvImJ_G0031849.1 mouse_genomes_project 7 23339893 23340479 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085559.1 MGP_129S1SvImJ_G0032712.1 mouse_genomes_project 7 107487989 107504620 - MGP_129S1SvImJ_P0085559 protein_coding protein_coding MGP_129S1SvImJ_T0085563.1 MGP_129S1SvImJ_G0032712.1 mouse_genomes_project 7 107494082 107504607 - MGP_129S1SvImJ_P0085563 protein_coding protein_coding MGP_129S1SvImJ_T0015846.1 MGP_129S1SvImJ_G0013935.1 mouse_genomes_project 7 76492533 76492663 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084839.1 MGP_129S1SvImJ_G0032455.1 mouse_genomes_project 7 86058567 86072603 + Mesdc2 protein_coding processed_transcript MGP_129S1SvImJ_T0084840.1 MGP_129S1SvImJ_G0032455.1 mouse_genomes_project 7 86066761 86076182 + MGP_129S1SvImJ_P0084840 Mesdc2 protein_coding protein_coding MGP_129S1SvImJ_T0084841.1 MGP_129S1SvImJ_G0032455.1 mouse_genomes_project 7 86066763 86072430 + MGP_129S1SvImJ_P0084841 Mesdc2 protein_coding protein_coding MGP_129S1SvImJ_T0084842.1 MGP_129S1SvImJ_G0032455.1 mouse_genomes_project 7 86067091 86072743 + MGP_129S1SvImJ_P0084842 Mesdc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0002250.1 MGP_129S1SvImJ_G0002162.1 mouse_genomes_project 7 49818844 49822424 + TEC TEC MGP_129S1SvImJ_T0100058.1 MGP_129S1SvImJ_G0038125.1 mouse_genomes_project 7 56042769 56042876 - Gm24116 snRNA snRNA MGP_129S1SvImJ_T0015849.1 MGP_129S1SvImJ_G0013938.1 mouse_genomes_project 7 77084375 77084654 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008913.1 MGP_129S1SvImJ_G0007197.1 mouse_genomes_project 7 73421959 73452896 + 4930441H08Rik lincRNA lincRNA MGP_129S1SvImJ_T0009029.1 MGP_129S1SvImJ_G0007272.1 mouse_genomes_project 7 131143740 131152789 + Gm44854 lincRNA lincRNA MGP_129S1SvImJ_T0086192.1 MGP_129S1SvImJ_G0032924.1 mouse_genomes_project 7 124086476 124102784 - MGP_129S1SvImJ_P0086192 Zp2 protein_coding protein_coding MGP_129S1SvImJ_T0083832.1 MGP_129S1SvImJ_G0032228.1 mouse_genomes_project 7 45799627 45800481 - Ppp1r15a protein_coding processed_transcript MGP_129S1SvImJ_T0083833.1 MGP_129S1SvImJ_G0032228.1 mouse_genomes_project 7 45799628 45802752 - MGP_129S1SvImJ_P0083833 Ppp1r15a protein_coding protein_coding MGP_129S1SvImJ_T0083834.1 MGP_129S1SvImJ_G0032228.1 mouse_genomes_project 7 45799633 45802630 - Ppp1r15a protein_coding retained_intron MGP_129S1SvImJ_T0086326.1 MGP_129S1SvImJ_G0032959.1 mouse_genomes_project 7 127261264 127299792 + Tnrc6a protein_coding processed_transcript MGP_129S1SvImJ_T0086327.1 MGP_129S1SvImJ_G0032959.1 mouse_genomes_project 7 127261556 127331801 + MGP_129S1SvImJ_P0086327 Tnrc6a protein_coding protein_coding MGP_129S1SvImJ_T0086328.1 MGP_129S1SvImJ_G0032959.1 mouse_genomes_project 7 127261560 127333110 + MGP_129S1SvImJ_P0086328 Tnrc6a protein_coding protein_coding MGP_129S1SvImJ_T0086329.1 MGP_129S1SvImJ_G0032959.1 mouse_genomes_project 7 127261635 127315494 + MGP_129S1SvImJ_P0086329 Tnrc6a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086330.1 MGP_129S1SvImJ_G0032959.1 mouse_genomes_project 7 127306923 127308706 + Tnrc6a protein_coding retained_intron MGP_129S1SvImJ_T0086331.1 MGP_129S1SvImJ_G0032959.1 mouse_genomes_project 7 127308432 127331792 + MGP_129S1SvImJ_P0086331 Tnrc6a protein_coding protein_coding MGP_129S1SvImJ_T0086332.1 MGP_129S1SvImJ_G0032959.1 mouse_genomes_project 7 127309188 127313500 + Tnrc6a protein_coding retained_intron MGP_129S1SvImJ_T0086333.1 MGP_129S1SvImJ_G0032959.1 mouse_genomes_project 7 127309447 127312234 + Tnrc6a protein_coding retained_intron MGP_129S1SvImJ_T0086334.1 MGP_129S1SvImJ_G0032959.1 mouse_genomes_project 7 127310659 127311999 + Tnrc6a protein_coding retained_intron MGP_129S1SvImJ_T0086335.1 MGP_129S1SvImJ_G0032959.1 mouse_genomes_project 7 127312016 127318423 + MGP_129S1SvImJ_P0086335 Tnrc6a protein_coding protein_coding MGP_129S1SvImJ_T0086336.1 MGP_129S1SvImJ_G0032959.1 mouse_genomes_project 7 127317722 127331532 + Tnrc6a protein_coding retained_intron MGP_129S1SvImJ_T0102755.1 MGP_129S1SvImJ_G0040587.1 mouse_genomes_project 7 48217712 48218541 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085527.1 MGP_129S1SvImJ_G0032694.1 mouse_genomes_project 7 107224075 107225041 + MGP_129S1SvImJ_P0085527 Olfr638 protein_coding protein_coding MGP_129S1SvImJ_T0102756.1 MGP_129S1SvImJ_G0040588.1 mouse_genomes_project 7 48262488 48263308 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0086912.1 MGP_129S1SvImJ_G0033063.1 mouse_genomes_project 7 132291693 132299686 + MGP_129S1SvImJ_P0086912 Bckdk protein_coding protein_coding MGP_129S1SvImJ_T0086913.1 MGP_129S1SvImJ_G0033063.1 mouse_genomes_project 7 132291714 132293574 + Bckdk protein_coding retained_intron MGP_129S1SvImJ_T0086914.1 MGP_129S1SvImJ_G0033063.1 mouse_genomes_project 7 132292251 132293783 + MGP_129S1SvImJ_P0086914 Bckdk protein_coding protein_coding MGP_129S1SvImJ_T0086915.1 MGP_129S1SvImJ_G0033063.1 mouse_genomes_project 7 132292373 132296220 + MGP_129S1SvImJ_P0086915 Bckdk protein_coding protein_coding MGP_129S1SvImJ_T0086916.1 MGP_129S1SvImJ_G0033063.1 mouse_genomes_project 7 132292373 132296220 + MGP_129S1SvImJ_P0086916 Bckdk protein_coding protein_coding MGP_129S1SvImJ_T0086917.1 MGP_129S1SvImJ_G0033063.1 mouse_genomes_project 7 132292528 132293995 + MGP_129S1SvImJ_P0086917 Bckdk protein_coding protein_coding MGP_129S1SvImJ_T0086918.1 MGP_129S1SvImJ_G0033063.1 mouse_genomes_project 7 132294851 132296212 + MGP_129S1SvImJ_P0086918 Bckdk protein_coding protein_coding MGP_129S1SvImJ_T0100054.1 MGP_129S1SvImJ_G0038121.1 mouse_genomes_project 7 46200205 46200290 - Gm22098 snRNA snRNA MGP_129S1SvImJ_T0085323.1 MGP_129S1SvImJ_G0032588.1 mouse_genomes_project 7 104834110 104849577 - MGP_129S1SvImJ_P0085323 Inppl1 protein_coding protein_coding MGP_129S1SvImJ_T0085324.1 MGP_129S1SvImJ_G0032588.1 mouse_genomes_project 7 104834117 104849273 - MGP_129S1SvImJ_P0085324 Inppl1 protein_coding protein_coding MGP_129S1SvImJ_T0085325.1 MGP_129S1SvImJ_G0032588.1 mouse_genomes_project 7 104834131 104840742 - Inppl1 protein_coding processed_transcript MGP_129S1SvImJ_T0085326.1 MGP_129S1SvImJ_G0032588.1 mouse_genomes_project 7 104835419 104849254 - MGP_129S1SvImJ_P0085326 Inppl1 protein_coding protein_coding MGP_129S1SvImJ_T0010857.1 MGP_129S1SvImJ_G0008973.1 mouse_genomes_project 7 9744821 9744931 - Gm23521 miRNA miRNA MGP_129S1SvImJ_T0081873.1 MGP_129S1SvImJ_G0031739.1 mouse_genomes_project 7 16168622 16170392 - MGP_129S1SvImJ_P0081873 protein_coding protein_coding MGP_129S1SvImJ_T0081311.1 MGP_129S1SvImJ_G0031540.1 mouse_genomes_project 7 1074935 1091720 - MGP_129S1SvImJ_P0081311 1700027J19Rik protein_coding protein_coding MGP_129S1SvImJ_T0081312.1 MGP_129S1SvImJ_G0031540.1 mouse_genomes_project 7 1075226 1091399 - MGP_129S1SvImJ_P0081312 1700027J19Rik protein_coding protein_coding MGP_129S1SvImJ_T0081313.1 MGP_129S1SvImJ_G0031540.1 mouse_genomes_project 7 1075451 1091302 - MGP_129S1SvImJ_P0081313 1700027J19Rik protein_coding protein_coding MGP_129S1SvImJ_T0102809.1 MGP_129S1SvImJ_G0040641.1 mouse_genomes_project 7 107061910 107062039 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0083041.1 MGP_129S1SvImJ_G0032044.1 mouse_genomes_project 7 29776326 29793391 + MGP_129S1SvImJ_P0083041 Dmkn protein_coding protein_coding MGP_129S1SvImJ_T0083042.1 MGP_129S1SvImJ_G0032044.1 mouse_genomes_project 7 29776333 29793390 + MGP_129S1SvImJ_P0083042 Dmkn protein_coding protein_coding MGP_129S1SvImJ_T0083043.1 MGP_129S1SvImJ_G0032044.1 mouse_genomes_project 7 29776333 29793390 + MGP_129S1SvImJ_P0083043 Dmkn protein_coding protein_coding MGP_129S1SvImJ_T0083044.1 MGP_129S1SvImJ_G0032044.1 mouse_genomes_project 7 29776369 29793390 + MGP_129S1SvImJ_P0083044 Dmkn protein_coding protein_coding MGP_129S1SvImJ_T0083045.1 MGP_129S1SvImJ_G0032044.1 mouse_genomes_project 7 29777627 29793136 + MGP_129S1SvImJ_P0083045 Dmkn protein_coding protein_coding MGP_129S1SvImJ_T0083046.1 MGP_129S1SvImJ_G0032044.1 mouse_genomes_project 7 29788781 29793395 + MGP_129S1SvImJ_P0083046 Dmkn protein_coding protein_coding MGP_129S1SvImJ_T0010936.1 MGP_129S1SvImJ_G0009052.1 mouse_genomes_project 7 117319376 117319478 - Gm23700 miRNA miRNA MGP_129S1SvImJ_T0087155.1 MGP_129S1SvImJ_G0033111.1 mouse_genomes_project 7 136921544 137006978 - MGP_129S1SvImJ_P0087155 Chst15 protein_coding protein_coding MGP_129S1SvImJ_T0087156.1 MGP_129S1SvImJ_G0033111.1 mouse_genomes_project 7 136921544 137006464 - MGP_129S1SvImJ_P0087156 Chst15 protein_coding protein_coding MGP_129S1SvImJ_T0087157.1 MGP_129S1SvImJ_G0033111.1 mouse_genomes_project 7 136957986 136966922 - Chst15 protein_coding processed_transcript MGP_129S1SvImJ_T0081989.1 MGP_129S1SvImJ_G0031774.1 mouse_genomes_project 7 17378384 17393570 + MGP_129S1SvImJ_P0081989 Ercc2 protein_coding protein_coding MGP_129S1SvImJ_T0081990.1 MGP_129S1SvImJ_G0031774.1 mouse_genomes_project 7 17378392 17382083 + Ercc2 protein_coding processed_transcript MGP_129S1SvImJ_T0081991.1 MGP_129S1SvImJ_G0031774.1 mouse_genomes_project 7 17378405 17393568 + MGP_129S1SvImJ_P0081991 Ercc2 protein_coding protein_coding MGP_129S1SvImJ_T0081992.1 MGP_129S1SvImJ_G0031774.1 mouse_genomes_project 7 17378414 17393570 + MGP_129S1SvImJ_P0081992 Ercc2 protein_coding protein_coding MGP_129S1SvImJ_T0081993.1 MGP_129S1SvImJ_G0031774.1 mouse_genomes_project 7 17378581 17382288 + Ercc2 protein_coding processed_transcript MGP_129S1SvImJ_T0081994.1 MGP_129S1SvImJ_G0031774.1 mouse_genomes_project 7 17378642 17392337 + MGP_129S1SvImJ_P0081994 Ercc2 protein_coding protein_coding MGP_129S1SvImJ_T0081995.1 MGP_129S1SvImJ_G0031774.1 mouse_genomes_project 7 17386121 17391556 + Ercc2 protein_coding processed_transcript MGP_129S1SvImJ_T0081996.1 MGP_129S1SvImJ_G0031774.1 mouse_genomes_project 7 17388306 17389793 + Ercc2 protein_coding retained_intron MGP_129S1SvImJ_T0081997.1 MGP_129S1SvImJ_G0031774.1 mouse_genomes_project 7 17391332 17392662 + Ercc2 protein_coding retained_intron MGP_129S1SvImJ_T0081998.1 MGP_129S1SvImJ_G0031774.1 mouse_genomes_project 7 17391536 17391941 + Ercc2 protein_coding retained_intron MGP_129S1SvImJ_T0082465.1 MGP_129S1SvImJ_G0031904.1 mouse_genomes_project 7 25855896 25885750 + MGP_129S1SvImJ_P0082465 Coq8b protein_coding protein_coding MGP_129S1SvImJ_T0082466.1 MGP_129S1SvImJ_G0031904.1 mouse_genomes_project 7 25856086 25885744 + MGP_129S1SvImJ_P0082466 Coq8b protein_coding protein_coding MGP_129S1SvImJ_T0082467.1 MGP_129S1SvImJ_G0031904.1 mouse_genomes_project 7 25856245 25885745 + MGP_129S1SvImJ_P0082467 Coq8b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082468.1 MGP_129S1SvImJ_G0031904.1 mouse_genomes_project 7 25864550 25868320 + Coq8b protein_coding processed_transcript MGP_129S1SvImJ_T0082469.1 MGP_129S1SvImJ_G0031904.1 mouse_genomes_project 7 25864811 25867615 + Coq8b protein_coding retained_intron MGP_129S1SvImJ_T0082470.1 MGP_129S1SvImJ_G0031904.1 mouse_genomes_project 7 25877982 25885743 + Coq8b protein_coding retained_intron MGP_129S1SvImJ_T0082471.1 MGP_129S1SvImJ_G0031904.1 mouse_genomes_project 7 25878184 25885213 + Coq8b protein_coding processed_transcript MGP_129S1SvImJ_T0081698.1 MGP_129S1SvImJ_G0031686.1 mouse_genomes_project 7 12131369 12132412 - MGP_129S1SvImJ_P0081698 protein_coding protein_coding MGP_129S1SvImJ_T0087510.1 MGP_129S1SvImJ_G0033217.1 mouse_genomes_project 7 146393443 146396242 + MGP_129S1SvImJ_P0087510 Rassf7 protein_coding protein_coding MGP_129S1SvImJ_T0087511.1 MGP_129S1SvImJ_G0033217.1 mouse_genomes_project 7 146393458 146395584 + Rassf7 protein_coding processed_transcript MGP_129S1SvImJ_T0087512.1 MGP_129S1SvImJ_G0033217.1 mouse_genomes_project 7 146393482 146395097 + Rassf7 protein_coding processed_transcript MGP_129S1SvImJ_T0087513.1 MGP_129S1SvImJ_G0033217.1 mouse_genomes_project 7 146393561 146395062 + MGP_129S1SvImJ_P0087513 Rassf7 protein_coding protein_coding MGP_129S1SvImJ_T0087514.1 MGP_129S1SvImJ_G0033217.1 mouse_genomes_project 7 146393786 146395056 + MGP_129S1SvImJ_P0087514 Rassf7 protein_coding protein_coding MGP_129S1SvImJ_T0087515.1 MGP_129S1SvImJ_G0033217.1 mouse_genomes_project 7 146394218 146395189 + MGP_129S1SvImJ_P0087515 Rassf7 protein_coding protein_coding MGP_129S1SvImJ_T0087516.1 MGP_129S1SvImJ_G0033217.1 mouse_genomes_project 7 146394283 146395297 + MGP_129S1SvImJ_P0087516 Rassf7 protein_coding protein_coding MGP_129S1SvImJ_T0008982.1 MGP_129S1SvImJ_G0007243.1 mouse_genomes_project 7 102041440 102053263 - lincRNA lincRNA MGP_129S1SvImJ_T0002300.1 MGP_129S1SvImJ_G0002211.1 mouse_genomes_project 7 81403324 81405204 + TEC TEC MGP_129S1SvImJ_T0087278.1 MGP_129S1SvImJ_G0033142.1 mouse_genomes_project 7 143821643 143833282 - MGP_129S1SvImJ_P0087278 Mapk1ip1 protein_coding protein_coding MGP_129S1SvImJ_T0087279.1 MGP_129S1SvImJ_G0033142.1 mouse_genomes_project 7 143821653 143833269 - MGP_129S1SvImJ_P0087279 Mapk1ip1 protein_coding protein_coding MGP_129S1SvImJ_T0087280.1 MGP_129S1SvImJ_G0033142.1 mouse_genomes_project 7 143821698 143833266 - MGP_129S1SvImJ_P0087280 Mapk1ip1 protein_coding protein_coding MGP_129S1SvImJ_T0087415.1 MGP_129S1SvImJ_G0033190.1 mouse_genomes_project 7 145906854 145917480 - MGP_129S1SvImJ_P0087415 Syce1 protein_coding protein_coding MGP_129S1SvImJ_T0083417.1 MGP_129S1SvImJ_G0032116.1 mouse_genomes_project 7 42372072 42414864 - MGP_129S1SvImJ_P0083417 Zfp141 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0083418.1 MGP_129S1SvImJ_G0032116.1 mouse_genomes_project 7 42372080 42414914 - MGP_129S1SvImJ_P0083418 Zfp141 protein_coding protein_coding MGP_129S1SvImJ_T0083420.1 MGP_129S1SvImJ_G0032116.1 mouse_genomes_project 7 42382174 42414928 - MGP_129S1SvImJ_P0083420 Zfp141 protein_coding protein_coding MGP_129S1SvImJ_T0083421.1 MGP_129S1SvImJ_G0032116.1 mouse_genomes_project 7 42395737 42414913 - Zfp141 protein_coding retained_intron MGP_129S1SvImJ_T0086380.1 MGP_129S1SvImJ_G0032969.1 mouse_genomes_project 7 129815669 129846196 + MGP_129S1SvImJ_P0086380 Il21r protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086381.1 MGP_129S1SvImJ_G0032969.1 mouse_genomes_project 7 129835801 129847681 + MGP_129S1SvImJ_P0086381 Il21r protein_coding protein_coding MGP_129S1SvImJ_T0002244.1 MGP_129S1SvImJ_G0002156.1 mouse_genomes_project 7 43462013 43462487 + TEC TEC MGP_129S1SvImJ_T0083146.1 MGP_129S1SvImJ_G0032060.1 mouse_genomes_project 7 30128367 30136928 - MGP_129S1SvImJ_P0083146 Fxyd3 protein_coding protein_coding MGP_129S1SvImJ_T0083147.1 MGP_129S1SvImJ_G0032060.1 mouse_genomes_project 7 30130738 30132486 - Fxyd3 protein_coding retained_intron MGP_129S1SvImJ_T0083148.1 MGP_129S1SvImJ_G0032060.1 mouse_genomes_project 7 30130740 30136879 - Fxyd3 protein_coding retained_intron MGP_129S1SvImJ_T0083149.1 MGP_129S1SvImJ_G0032060.1 mouse_genomes_project 7 30130740 30131242 - Fxyd3 protein_coding retained_intron MGP_129S1SvImJ_T0083150.1 MGP_129S1SvImJ_G0032060.1 mouse_genomes_project 7 30130740 30131656 - Fxyd3 protein_coding retained_intron MGP_129S1SvImJ_T0083151.1 MGP_129S1SvImJ_G0032060.1 mouse_genomes_project 7 30130741 30136893 - MGP_129S1SvImJ_P0083151 Fxyd3 protein_coding protein_coding MGP_129S1SvImJ_T0083152.1 MGP_129S1SvImJ_G0032060.1 mouse_genomes_project 7 30130742 30132248 - Fxyd3 protein_coding retained_intron MGP_129S1SvImJ_T0083153.1 MGP_129S1SvImJ_G0032060.1 mouse_genomes_project 7 30131087 30135170 - MGP_129S1SvImJ_P0083153 Fxyd3 protein_coding protein_coding MGP_129S1SvImJ_T0083154.1 MGP_129S1SvImJ_G0032060.1 mouse_genomes_project 7 30131736 30136878 - Fxyd3 protein_coding retained_intron MGP_129S1SvImJ_T0083155.1 MGP_129S1SvImJ_G0032060.1 mouse_genomes_project 7 30132212 30136869 - Fxyd3 protein_coding retained_intron MGP_129S1SvImJ_T0083156.1 MGP_129S1SvImJ_G0032060.1 mouse_genomes_project 7 30133215 30136887 - Fxyd3 protein_coding retained_intron MGP_129S1SvImJ_T0086375.1 MGP_129S1SvImJ_G0032968.1 mouse_genomes_project 7 129763051 129790423 + MGP_129S1SvImJ_P0086375 Il4ra protein_coding protein_coding MGP_129S1SvImJ_T0086376.1 MGP_129S1SvImJ_G0032968.1 mouse_genomes_project 7 129763202 129783230 + Il4ra protein_coding retained_intron MGP_129S1SvImJ_T0086377.1 MGP_129S1SvImJ_G0032968.1 mouse_genomes_project 7 129763202 129778163 + MGP_129S1SvImJ_P0086377 Il4ra protein_coding protein_coding MGP_129S1SvImJ_T0086378.1 MGP_129S1SvImJ_G0032968.1 mouse_genomes_project 7 129763207 129780947 + MGP_129S1SvImJ_P0086378 Il4ra protein_coding protein_coding MGP_129S1SvImJ_T0086379.1 MGP_129S1SvImJ_G0032968.1 mouse_genomes_project 7 129763218 129788916 + MGP_129S1SvImJ_P0086379 Il4ra protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081319.1 MGP_129S1SvImJ_G0031544.1 mouse_genomes_project 7 1340361 1361903 - MGP_129S1SvImJ_P0081319 Rdh13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081320.1 MGP_129S1SvImJ_G0031544.1 mouse_genomes_project 7 1341258 1361951 - MGP_129S1SvImJ_P0081320 Rdh13 protein_coding protein_coding MGP_129S1SvImJ_T0081321.1 MGP_129S1SvImJ_G0031544.1 mouse_genomes_project 7 1351317 1361483 - MGP_129S1SvImJ_P0081321 Rdh13 protein_coding protein_coding MGP_129S1SvImJ_T0081322.1 MGP_129S1SvImJ_G0031544.1 mouse_genomes_project 7 1356711 1361895 - Rdh13 protein_coding retained_intron MGP_129S1SvImJ_T0081323.1 MGP_129S1SvImJ_G0031544.1 mouse_genomes_project 7 1358955 1361944 - Rdh13 protein_coding processed_transcript MGP_129S1SvImJ_T0081324.1 MGP_129S1SvImJ_G0031544.1 mouse_genomes_project 7 1360504 1361928 - Rdh13 protein_coding processed_transcript MGP_129S1SvImJ_T0087274.1 MGP_129S1SvImJ_G0033140.1 mouse_genomes_project 7 142373735 142413162 + MGP_129S1SvImJ_P0087274 Glrx3 protein_coding protein_coding MGP_129S1SvImJ_T0009052.1 MGP_129S1SvImJ_G0007286.1 mouse_genomes_project 7 135048624 135051891 + lincRNA lincRNA MGP_129S1SvImJ_T0008920.1 MGP_129S1SvImJ_G0007204.1 mouse_genomes_project 7 74660701 74662811 + 4933435G04Rik lincRNA lincRNA MGP_129S1SvImJ_T0015859.1 MGP_129S1SvImJ_G0013948.1 mouse_genomes_project 7 85115742 85116060 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084940.1 MGP_129S1SvImJ_G0032505.1 mouse_genomes_project 7 92723133 92837784 + MGP_129S1SvImJ_P0084940 Sytl2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0084941.1 MGP_129S1SvImJ_G0032505.1 mouse_genomes_project 7 92772476 92838676 + MGP_129S1SvImJ_P0084941 Sytl2 protein_coding protein_coding MGP_129S1SvImJ_T0084942.1 MGP_129S1SvImJ_G0032505.1 mouse_genomes_project 7 92772476 92838676 + MGP_129S1SvImJ_P0084942 Sytl2 protein_coding protein_coding MGP_129S1SvImJ_T0084943.1 MGP_129S1SvImJ_G0032505.1 mouse_genomes_project 7 92772476 92838676 + MGP_129S1SvImJ_P0084943 Sytl2 protein_coding protein_coding MGP_129S1SvImJ_T0084944.1 MGP_129S1SvImJ_G0032505.1 mouse_genomes_project 7 92772476 92838676 + MGP_129S1SvImJ_P0084944 Sytl2 protein_coding protein_coding MGP_129S1SvImJ_T0084945.1 MGP_129S1SvImJ_G0032505.1 mouse_genomes_project 7 92804932 92838676 + Sytl2 protein_coding processed_transcript MGP_129S1SvImJ_T0084946.1 MGP_129S1SvImJ_G0032505.1 mouse_genomes_project 7 92804954 92838676 + Sytl2 protein_coding processed_transcript MGP_129S1SvImJ_T0084947.1 MGP_129S1SvImJ_G0032505.1 mouse_genomes_project 7 92824974 92838676 + Sytl2 protein_coding processed_transcript MGP_129S1SvImJ_T0084838.1 MGP_129S1SvImJ_G0032454.1 mouse_genomes_project 7 86053904 86058407 - MGP_129S1SvImJ_P0084838 Mesdc1 protein_coding protein_coding MGP_129S1SvImJ_T0101764.1 MGP_129S1SvImJ_G0039747.1 mouse_genomes_project 7 39076252 39076597 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101765.1 MGP_129S1SvImJ_G0039747.1 mouse_genomes_project 7 39076531 39079848 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0085728.1 MGP_129S1SvImJ_G0032778.1 mouse_genomes_project 7 110223756 110224704 + MGP_129S1SvImJ_P0085728 Olfr704 protein_coding protein_coding MGP_129S1SvImJ_T0087736.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147755874 147774609 + Tnnt3 protein_coding processed_transcript MGP_129S1SvImJ_T0087737.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147755874 147774609 + MGP_129S1SvImJ_P0087737 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087738.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147755874 147774609 + MGP_129S1SvImJ_P0087738 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087739.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147755874 147774609 + MGP_129S1SvImJ_P0087739 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087740.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147755874 147774609 + MGP_129S1SvImJ_P0087740 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087741.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147755874 147774609 + MGP_129S1SvImJ_P0087741 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087742.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147755874 147774609 + MGP_129S1SvImJ_P0087742 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087743.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147755874 147774609 + MGP_129S1SvImJ_P0087743 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087744.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147755881 147774604 + MGP_129S1SvImJ_P0087744 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087745.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147755881 147774604 + MGP_129S1SvImJ_P0087745 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087746.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147755881 147774604 + MGP_129S1SvImJ_P0087746 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087747.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147755881 147774604 + MGP_129S1SvImJ_P0087747 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087748.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147755902 147774608 + MGP_129S1SvImJ_P0087748 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087749.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147755910 147774605 + MGP_129S1SvImJ_P0087749 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087750.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147758655 147770137 + MGP_129S1SvImJ_P0087750 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087751.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147758658 147771223 + MGP_129S1SvImJ_P0087751 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087752.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147758676 147774431 + MGP_129S1SvImJ_P0087752 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087753.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147758676 147774431 + MGP_129S1SvImJ_P0087753 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087754.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147758676 147774431 + MGP_129S1SvImJ_P0087754 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087755.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147758676 147774431 + MGP_129S1SvImJ_P0087755 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087756.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147758676 147774431 + MGP_129S1SvImJ_P0087756 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087757.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147758676 147774431 + MGP_129S1SvImJ_P0087757 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087758.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147758676 147774431 + MGP_129S1SvImJ_P0087758 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087759.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147758676 147774431 + MGP_129S1SvImJ_P0087759 Tnnt3 protein_coding protein_coding MGP_129S1SvImJ_T0087760.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147762633 147771186 + Tnnt3 protein_coding retained_intron MGP_129S1SvImJ_T0087761.1 MGP_129S1SvImJ_G0033259.1 mouse_genomes_project 7 147772730 147774610 + Tnnt3 protein_coding retained_intron MGP_129S1SvImJ_T0082567.1 MGP_129S1SvImJ_G0031928.1 mouse_genomes_project 7 26798618 26807014 - MGP_129S1SvImJ_P0082567 Psmc4 protein_coding protein_coding MGP_129S1SvImJ_T0082568.1 MGP_129S1SvImJ_G0031928.1 mouse_genomes_project 7 26798627 26803933 - Psmc4 protein_coding retained_intron MGP_129S1SvImJ_T0082569.1 MGP_129S1SvImJ_G0031928.1 mouse_genomes_project 7 26798628 26806969 - Psmc4 protein_coding retained_intron MGP_129S1SvImJ_T0082570.1 MGP_129S1SvImJ_G0031928.1 mouse_genomes_project 7 26799499 26804260 - Psmc4 protein_coding retained_intron MGP_129S1SvImJ_T0082571.1 MGP_129S1SvImJ_G0031928.1 mouse_genomes_project 7 26799576 26804429 - Psmc4 protein_coding processed_transcript MGP_129S1SvImJ_T0082572.1 MGP_129S1SvImJ_G0031928.1 mouse_genomes_project 7 26804167 26806969 - Psmc4 protein_coding retained_intron MGP_129S1SvImJ_T0102762.1 MGP_129S1SvImJ_G0040594.1 mouse_genomes_project 7 48770064 48771412 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085741.1 MGP_129S1SvImJ_G0032791.1 mouse_genomes_project 7 110463004 110463952 - MGP_129S1SvImJ_P0085741 protein_coding protein_coding MGP_129S1SvImJ_T0102735.1 MGP_129S1SvImJ_G0040567.1 mouse_genomes_project 7 40645096 40931115 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085477.1 MGP_129S1SvImJ_G0032647.1 mouse_genomes_project 7 106339967 106343252 - MGP_129S1SvImJ_P0085477 protein_coding protein_coding MGP_129S1SvImJ_T0015907.1 MGP_129S1SvImJ_G0013996.1 mouse_genomes_project 7 124579949 124580800 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015746.1 MGP_129S1SvImJ_G0013835.1 mouse_genomes_project 7 22449082 22455014 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015731.1 MGP_129S1SvImJ_G0013820.1 mouse_genomes_project 7 13541038 13541998 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0087656.1 MGP_129S1SvImJ_G0033240.1 mouse_genomes_project 7 146900981 146909424 + MGP_129S1SvImJ_P0087656 Muc2 protein_coding protein_coding MGP_129S1SvImJ_T0087657.1 MGP_129S1SvImJ_G0033240.1 mouse_genomes_project 7 146901010 146935405 + MGP_129S1SvImJ_P0087657 Muc2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0087658.1 MGP_129S1SvImJ_G0033240.1 mouse_genomes_project 7 146906344 146907889 + MGP_129S1SvImJ_P0087658 Muc2 protein_coding protein_coding MGP_129S1SvImJ_T0087659.1 MGP_129S1SvImJ_G0033240.1 mouse_genomes_project 7 146910137 146912436 + MGP_129S1SvImJ_P0087659 Muc2 protein_coding protein_coding MGP_129S1SvImJ_T0087660.1 MGP_129S1SvImJ_G0033240.1 mouse_genomes_project 7 146913028 146913707 + MGP_129S1SvImJ_P0087660 Muc2 protein_coding protein_coding MGP_129S1SvImJ_T0087661.1 MGP_129S1SvImJ_G0033240.1 mouse_genomes_project 7 146915096 146915543 + MGP_129S1SvImJ_P0087661 Muc2 protein_coding protein_coding MGP_129S1SvImJ_T0087662.1 MGP_129S1SvImJ_G0033240.1 mouse_genomes_project 7 146924433 146935561 + MGP_129S1SvImJ_P0087662 Muc2 protein_coding protein_coding MGP_129S1SvImJ_T0087663.1 MGP_129S1SvImJ_G0033240.1 mouse_genomes_project 7 146926653 146935558 + MGP_129S1SvImJ_P0087663 Muc2 protein_coding protein_coding MGP_129S1SvImJ_T0081794.1 MGP_129S1SvImJ_G0031716.1 mouse_genomes_project 7 14526194 14545134 + MGP_129S1SvImJ_P0081794 Slc1a5 protein_coding protein_coding MGP_129S1SvImJ_T0081795.1 MGP_129S1SvImJ_G0031716.1 mouse_genomes_project 7 14526222 14545134 + Slc1a5 protein_coding retained_intron MGP_129S1SvImJ_T0081796.1 MGP_129S1SvImJ_G0031716.1 mouse_genomes_project 7 14527259 14532017 + Slc1a5 protein_coding retained_intron MGP_129S1SvImJ_T0081797.1 MGP_129S1SvImJ_G0031716.1 mouse_genomes_project 7 14529596 14540486 + Slc1a5 protein_coding processed_transcript MGP_129S1SvImJ_T0081798.1 MGP_129S1SvImJ_G0031716.1 mouse_genomes_project 7 14530498 14532006 + Slc1a5 protein_coding retained_intron MGP_129S1SvImJ_T0081799.1 MGP_129S1SvImJ_G0031716.1 mouse_genomes_project 7 14531208 14540576 + Slc1a5 protein_coding retained_intron MGP_129S1SvImJ_T0081800.1 MGP_129S1SvImJ_G0031716.1 mouse_genomes_project 7 14539806 14542996 + Slc1a5 protein_coding processed_transcript MGP_129S1SvImJ_T0081801.1 MGP_129S1SvImJ_G0031716.1 mouse_genomes_project 7 14539956 14542760 + Slc1a5 protein_coding retained_intron MGP_129S1SvImJ_T0081628.1 MGP_129S1SvImJ_G0031661.1 mouse_genomes_project 7 10406329 10411231 - MGP_129S1SvImJ_P0081628 Zbtb45 protein_coding protein_coding MGP_129S1SvImJ_T0081629.1 MGP_129S1SvImJ_G0031661.1 mouse_genomes_project 7 10407079 10411209 - MGP_129S1SvImJ_P0081629 Zbtb45 protein_coding protein_coding MGP_129S1SvImJ_T0086200.1 MGP_129S1SvImJ_G0032928.1 mouse_genomes_project 7 124291766 124329424 + Abca15 protein_coding retained_intron MGP_129S1SvImJ_T0086201.1 MGP_129S1SvImJ_G0032928.1 mouse_genomes_project 7 124291766 124382026 + MGP_129S1SvImJ_P0086201 Abca15 protein_coding protein_coding MGP_129S1SvImJ_T0086202.1 MGP_129S1SvImJ_G0032928.1 mouse_genomes_project 7 124291766 124382026 + MGP_129S1SvImJ_P0086202 Abca15 protein_coding protein_coding MGP_129S1SvImJ_T0102773.1 MGP_129S1SvImJ_G0040605.1 mouse_genomes_project 7 87240078 87253659 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0084672.1 MGP_129S1SvImJ_G0032415.1 mouse_genomes_project 7 82360190 82369454 - Furin protein_coding retained_intron MGP_129S1SvImJ_T0084673.1 MGP_129S1SvImJ_G0032415.1 mouse_genomes_project 7 82360798 82372048 - MGP_129S1SvImJ_P0084673 Furin protein_coding protein_coding MGP_129S1SvImJ_T0084674.1 MGP_129S1SvImJ_G0032415.1 mouse_genomes_project 7 82360798 82378082 - MGP_129S1SvImJ_P0084674 Furin protein_coding protein_coding MGP_129S1SvImJ_T0084675.1 MGP_129S1SvImJ_G0032415.1 mouse_genomes_project 7 82360801 82374831 - MGP_129S1SvImJ_P0084675 Furin protein_coding protein_coding MGP_129S1SvImJ_T0084676.1 MGP_129S1SvImJ_G0032415.1 mouse_genomes_project 7 82369100 82371092 - MGP_129S1SvImJ_P0084676 Furin protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084677.1 MGP_129S1SvImJ_G0032415.1 mouse_genomes_project 7 82369410 82372589 - Furin protein_coding retained_intron MGP_129S1SvImJ_T0084678.1 MGP_129S1SvImJ_G0032415.1 mouse_genomes_project 7 82371713 82378087 - MGP_129S1SvImJ_P0084678 Furin protein_coding protein_coding MGP_129S1SvImJ_T0084679.1 MGP_129S1SvImJ_G0032415.1 mouse_genomes_project 7 82371760 82375973 - MGP_129S1SvImJ_P0084679 Furin protein_coding protein_coding MGP_129S1SvImJ_T0015939.1 MGP_129S1SvImJ_G0014028.1 mouse_genomes_project 7 143910709 143911636 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008883.1 MGP_129S1SvImJ_G0007176.1 mouse_genomes_project 7 62124765 62337353 - lincRNA lincRNA MGP_129S1SvImJ_T0008884.1 MGP_129S1SvImJ_G0007176.1 mouse_genomes_project 7 62301405 62337361 - lincRNA lincRNA MGP_129S1SvImJ_T0081553.1 MGP_129S1SvImJ_G0031624.1 mouse_genomes_project 7 7784491 7785451 - MGP_129S1SvImJ_P0081553 Vmn1r68 protein_coding protein_coding MGP_129S1SvImJ_T0100038.1 MGP_129S1SvImJ_G0038105.1 mouse_genomes_project 7 1025012 1025183 + Gm23741 snRNA snRNA MGP_129S1SvImJ_T0005290.1 MGP_129S1SvImJ_G0004492.1 mouse_genomes_project 7 116106771 116115483 - Parvaos antisense antisense MGP_129S1SvImJ_T0015714.1 MGP_129S1SvImJ_G0013803.1 mouse_genomes_project 7 9473638 9480692 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008874.1 MGP_129S1SvImJ_G0007168.1 mouse_genomes_project 7 43583872 43584230 + Gm44818 lincRNA lincRNA MGP_129S1SvImJ_T0008841.1 MGP_129S1SvImJ_G0007144.1 mouse_genomes_project 7 33979320 33994355 - lincRNA lincRNA MGP_129S1SvImJ_T0084859.1 MGP_129S1SvImJ_G0032463.1 mouse_genomes_project 7 87183855 87204526 - MGP_129S1SvImJ_P0084859 protein_coding protein_coding MGP_129S1SvImJ_T0002284.1 MGP_129S1SvImJ_G0002195.1 mouse_genomes_project 7 77149755 77151382 + TEC TEC MGP_129S1SvImJ_T0081350.1 MGP_129S1SvImJ_G0031547.1 mouse_genomes_project 7 1418784 1431540 - MGP_129S1SvImJ_P0081350 Tnnt1 protein_coding protein_coding MGP_129S1SvImJ_T0081351.1 MGP_129S1SvImJ_G0031547.1 mouse_genomes_project 7 1418784 1431569 - MGP_129S1SvImJ_P0081351 Tnnt1 protein_coding protein_coding MGP_129S1SvImJ_T0081352.1 MGP_129S1SvImJ_G0031547.1 mouse_genomes_project 7 1418877 1431524 - MGP_129S1SvImJ_P0081352 Tnnt1 protein_coding protein_coding MGP_129S1SvImJ_T0081353.1 MGP_129S1SvImJ_G0031547.1 mouse_genomes_project 7 1418877 1431540 - MGP_129S1SvImJ_P0081353 Tnnt1 protein_coding protein_coding MGP_129S1SvImJ_T0081354.1 MGP_129S1SvImJ_G0031547.1 mouse_genomes_project 7 1418969 1429934 - MGP_129S1SvImJ_P0081354 Tnnt1 protein_coding protein_coding MGP_129S1SvImJ_T0081355.1 MGP_129S1SvImJ_G0031547.1 mouse_genomes_project 7 1418998 1423696 - Tnnt1 protein_coding retained_intron MGP_129S1SvImJ_T0081356.1 MGP_129S1SvImJ_G0031547.1 mouse_genomes_project 7 1421607 1431526 - MGP_129S1SvImJ_P0081356 Tnnt1 protein_coding protein_coding MGP_129S1SvImJ_T0081357.1 MGP_129S1SvImJ_G0031547.1 mouse_genomes_project 7 1421639 1423556 - Tnnt1 protein_coding retained_intron MGP_129S1SvImJ_T0081358.1 MGP_129S1SvImJ_G0031547.1 mouse_genomes_project 7 1422267 1430181 - MGP_129S1SvImJ_P0081358 Tnnt1 protein_coding protein_coding MGP_129S1SvImJ_T0081359.1 MGP_129S1SvImJ_G0031547.1 mouse_genomes_project 7 1422335 1430140 - MGP_129S1SvImJ_P0081359 Tnnt1 protein_coding protein_coding MGP_129S1SvImJ_T0081360.1 MGP_129S1SvImJ_G0031547.1 mouse_genomes_project 7 1423367 1431947 - MGP_129S1SvImJ_P0081360 Tnnt1 protein_coding protein_coding MGP_129S1SvImJ_T0081361.1 MGP_129S1SvImJ_G0031547.1 mouse_genomes_project 7 1429402 1430673 - MGP_129S1SvImJ_P0081361 Tnnt1 protein_coding protein_coding MGP_129S1SvImJ_T0085854.1 MGP_129S1SvImJ_G0032852.1 mouse_genomes_project 7 113481644 113518409 + MGP_129S1SvImJ_P0085854 Ipo7 protein_coding protein_coding MGP_129S1SvImJ_T0083230.1 MGP_129S1SvImJ_G0032077.1 mouse_genomes_project 7 33616307 33667879 - MGP_129S1SvImJ_P0083230 Lsm14a protein_coding protein_coding MGP_129S1SvImJ_T0083231.1 MGP_129S1SvImJ_G0032077.1 mouse_genomes_project 7 33616324 33626311 - MGP_129S1SvImJ_P0083231 Lsm14a protein_coding protein_coding MGP_129S1SvImJ_T0083232.1 MGP_129S1SvImJ_G0032077.1 mouse_genomes_project 7 33617376 33672946 - MGP_129S1SvImJ_P0083232 Lsm14a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083233.1 MGP_129S1SvImJ_G0032077.1 mouse_genomes_project 7 33617599 33645280 - MGP_129S1SvImJ_P0083233 Lsm14a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083234.1 MGP_129S1SvImJ_G0032077.1 mouse_genomes_project 7 33623610 33626372 - Lsm14a protein_coding retained_intron MGP_129S1SvImJ_T0083235.1 MGP_129S1SvImJ_G0032077.1 mouse_genomes_project 7 33626298 33667671 - MGP_129S1SvImJ_P0083235 Lsm14a protein_coding protein_coding MGP_129S1SvImJ_T0083236.1 MGP_129S1SvImJ_G0032077.1 mouse_genomes_project 7 33626629 33667272 - MGP_129S1SvImJ_P0083236 Lsm14a protein_coding protein_coding MGP_129S1SvImJ_T0083237.1 MGP_129S1SvImJ_G0032077.1 mouse_genomes_project 7 33664772 33667353 - Lsm14a protein_coding retained_intron MGP_129S1SvImJ_T0015866.1 MGP_129S1SvImJ_G0013955.1 mouse_genomes_project 7 90828662 90829218 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0087342.1 MGP_129S1SvImJ_G0033155.1 mouse_genomes_project 7 145019298 145020622 + MGP_129S1SvImJ_P0087342 Utf1 protein_coding protein_coding MGP_129S1SvImJ_T0082806.1 MGP_129S1SvImJ_G0031989.1 mouse_genomes_project 7 28769727 28789982 - MGP_129S1SvImJ_P0082806 protein_coding protein_coding MGP_129S1SvImJ_T0082807.1 MGP_129S1SvImJ_G0031989.1 mouse_genomes_project 7 28778526 28789954 - protein_coding retained_intron MGP_129S1SvImJ_T0082808.1 MGP_129S1SvImJ_G0031989.1 mouse_genomes_project 7 28780074 28790006 - MGP_129S1SvImJ_P0082808 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0082809.1 MGP_129S1SvImJ_G0031989.1 mouse_genomes_project 7 28786304 28789755 - protein_coding processed_transcript MGP_129S1SvImJ_T0082810.1 MGP_129S1SvImJ_G0031990.1 mouse_genomes_project 7 28797887 28814127 + MGP_129S1SvImJ_P0082810 Zfp420 protein_coding protein_coding MGP_129S1SvImJ_T0082811.1 MGP_129S1SvImJ_G0031990.1 mouse_genomes_project 7 28797912 28799523 + Zfp420 protein_coding retained_intron MGP_129S1SvImJ_T0082812.1 MGP_129S1SvImJ_G0031990.1 mouse_genomes_project 7 28797919 28814914 + Zfp420 protein_coding processed_transcript MGP_129S1SvImJ_T0082813.1 MGP_129S1SvImJ_G0031990.1 mouse_genomes_project 7 28797949 28814449 + MGP_129S1SvImJ_P0082813 Zfp420 protein_coding protein_coding MGP_129S1SvImJ_T0082814.1 MGP_129S1SvImJ_G0031990.1 mouse_genomes_project 7 28810145 28812158 + Zfp420 protein_coding retained_intron MGP_129S1SvImJ_T0083736.1 MGP_129S1SvImJ_G0032206.1 mouse_genomes_project 7 45413059 45416310 - MGP_129S1SvImJ_P0083736 Gfy protein_coding protein_coding MGP_129S1SvImJ_T0086001.1 MGP_129S1SvImJ_G0032886.1 mouse_genomes_project 7 118427912 118477391 + MGP_129S1SvImJ_P0086001 Insc protein_coding protein_coding MGP_129S1SvImJ_T0086002.1 MGP_129S1SvImJ_G0032886.1 mouse_genomes_project 7 118429958 118477669 + MGP_129S1SvImJ_P0086002 Insc protein_coding protein_coding MGP_129S1SvImJ_T0086003.1 MGP_129S1SvImJ_G0032886.1 mouse_genomes_project 7 118429984 118537854 + MGP_129S1SvImJ_P0086003 Insc protein_coding protein_coding MGP_129S1SvImJ_T0086004.1 MGP_129S1SvImJ_G0032886.1 mouse_genomes_project 7 118437939 118454568 + Insc protein_coding retained_intron MGP_129S1SvImJ_T0086005.1 MGP_129S1SvImJ_G0032886.1 mouse_genomes_project 7 118453958 118537857 + MGP_129S1SvImJ_P0086005 Insc protein_coding protein_coding MGP_129S1SvImJ_T0086006.1 MGP_129S1SvImJ_G0032886.1 mouse_genomes_project 7 118453996 118477428 + MGP_129S1SvImJ_P0086006 Insc protein_coding protein_coding MGP_129S1SvImJ_T0086007.1 MGP_129S1SvImJ_G0032886.1 mouse_genomes_project 7 118456543 118477564 + Insc protein_coding processed_transcript MGP_129S1SvImJ_T0086008.1 MGP_129S1SvImJ_G0032886.1 mouse_genomes_project 7 118478425 118537854 + Insc protein_coding retained_intron MGP_129S1SvImJ_T0086009.1 MGP_129S1SvImJ_G0032886.1 mouse_genomes_project 7 118480340 118516670 + MGP_129S1SvImJ_P0086009 Insc protein_coding protein_coding MGP_129S1SvImJ_T0082103.1 MGP_129S1SvImJ_G0031813.1 mouse_genomes_project 7 22174992 22175964 + MGP_129S1SvImJ_P0082103 Vmn1r179 protein_coding protein_coding MGP_129S1SvImJ_T0084986.1 MGP_129S1SvImJ_G0032517.1 mouse_genomes_project 7 98840715 99600836 + MGP_129S1SvImJ_P0084986 Tenm4 protein_coding protein_coding MGP_129S1SvImJ_T0084987.1 MGP_129S1SvImJ_G0032517.1 mouse_genomes_project 7 98879017 99112521 + Tenm4 protein_coding retained_intron MGP_129S1SvImJ_T0084988.1 MGP_129S1SvImJ_G0032517.1 mouse_genomes_project 7 98879067 99177180 + Tenm4 protein_coding processed_transcript MGP_129S1SvImJ_T0084989.1 MGP_129S1SvImJ_G0032517.1 mouse_genomes_project 7 98879506 99114349 + Tenm4 protein_coding retained_intron MGP_129S1SvImJ_T0084990.1 MGP_129S1SvImJ_G0032517.1 mouse_genomes_project 7 98879514 99234197 + MGP_129S1SvImJ_P0084990 Tenm4 protein_coding protein_coding MGP_129S1SvImJ_T0084991.1 MGP_129S1SvImJ_G0032517.1 mouse_genomes_project 7 98879997 99603367 + MGP_129S1SvImJ_P0084991 Tenm4 protein_coding protein_coding MGP_129S1SvImJ_T0084992.1 MGP_129S1SvImJ_G0032517.1 mouse_genomes_project 7 98881031 99600821 + MGP_129S1SvImJ_P0084992 Tenm4 protein_coding protein_coding MGP_129S1SvImJ_T0084993.1 MGP_129S1SvImJ_G0032517.1 mouse_genomes_project 7 99203172 99234197 + MGP_129S1SvImJ_P0084993 Tenm4 protein_coding protein_coding MGP_129S1SvImJ_T0084994.1 MGP_129S1SvImJ_G0032517.1 mouse_genomes_project 7 99330669 99421614 + Tenm4 protein_coding retained_intron MGP_129S1SvImJ_T0084995.1 MGP_129S1SvImJ_G0032517.1 mouse_genomes_project 7 99466928 99487997 + MGP_129S1SvImJ_P0084995 Tenm4 protein_coding protein_coding MGP_129S1SvImJ_T0084996.1 MGP_129S1SvImJ_G0032517.1 mouse_genomes_project 7 99486904 99488834 + Tenm4 protein_coding processed_transcript MGP_129S1SvImJ_T0084997.1 MGP_129S1SvImJ_G0032517.1 mouse_genomes_project 7 99486904 99535859 + Tenm4 protein_coding retained_intron MGP_129S1SvImJ_T0084613.1 MGP_129S1SvImJ_G0032409.1 mouse_genomes_project 7 82262788 82291371 - Rccd1 protein_coding retained_intron MGP_129S1SvImJ_T0084628.1 MGP_129S1SvImJ_G0032409.1 mouse_genomes_project 7 82285861 82295920 - MGP_129S1SvImJ_P0084628 Rccd1 protein_coding protein_coding MGP_129S1SvImJ_T0084629.1 MGP_129S1SvImJ_G0032409.1 mouse_genomes_project 7 82286812 82295621 - Rccd1 protein_coding retained_intron MGP_129S1SvImJ_T0084630.1 MGP_129S1SvImJ_G0032409.1 mouse_genomes_project 7 82286812 82295940 - MGP_129S1SvImJ_P0084630 Rccd1 protein_coding protein_coding MGP_129S1SvImJ_T0084631.1 MGP_129S1SvImJ_G0032409.1 mouse_genomes_project 7 82286859 82295950 - Rccd1 protein_coding retained_intron MGP_129S1SvImJ_T0084632.1 MGP_129S1SvImJ_G0032409.1 mouse_genomes_project 7 82286861 82290477 - Rccd1 protein_coding retained_intron MGP_129S1SvImJ_T0084633.1 MGP_129S1SvImJ_G0032409.1 mouse_genomes_project 7 82292188 82295616 - MGP_129S1SvImJ_P0084633 Rccd1 protein_coding protein_coding MGP_129S1SvImJ_T0084634.1 MGP_129S1SvImJ_G0032409.1 mouse_genomes_project 7 82292500 82295649 - Rccd1 protein_coding retained_intron MGP_129S1SvImJ_T0084635.1 MGP_129S1SvImJ_G0032409.1 mouse_genomes_project 7 82293895 82295630 - Rccd1 protein_coding retained_intron MGP_129S1SvImJ_T0084636.1 MGP_129S1SvImJ_G0032409.1 mouse_genomes_project 7 82295265 82295897 - Rccd1 protein_coding processed_transcript MGP_129S1SvImJ_T0081776.1 MGP_129S1SvImJ_G0031707.1 mouse_genomes_project 7 14001343 14011802 + MGP_129S1SvImJ_P0081776 Bbc3 protein_coding protein_coding MGP_129S1SvImJ_T0081777.1 MGP_129S1SvImJ_G0031707.1 mouse_genomes_project 7 14003976 14007312 + MGP_129S1SvImJ_P0081777 Bbc3 protein_coding protein_coding MGP_129S1SvImJ_T0081778.1 MGP_129S1SvImJ_G0031707.1 mouse_genomes_project 7 14007090 14011295 + Bbc3 protein_coding processed_transcript MGP_129S1SvImJ_T0102712.1 MGP_129S1SvImJ_G0040545.1 mouse_genomes_project 7 14957613 14958604 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085856.1 MGP_129S1SvImJ_G0032854.1 mouse_genomes_project 7 113524984 113559296 + MGP_129S1SvImJ_P0085856 Zfp143 protein_coding protein_coding MGP_129S1SvImJ_T0085857.1 MGP_129S1SvImJ_G0032854.1 mouse_genomes_project 7 113524992 113559291 + MGP_129S1SvImJ_P0085857 Zfp143 protein_coding protein_coding MGP_129S1SvImJ_T0081692.1 MGP_129S1SvImJ_G0031683.1 mouse_genomes_project 7 11939750 11967072 - MGP_129S1SvImJ_P0081692 Sult2a8 protein_coding protein_coding MGP_129S1SvImJ_T0081693.1 MGP_129S1SvImJ_G0031683.1 mouse_genomes_project 7 11939753 11980321 - MGP_129S1SvImJ_P0081693 Sult2a8 protein_coding protein_coding MGP_129S1SvImJ_T0081694.1 MGP_129S1SvImJ_G0031683.1 mouse_genomes_project 7 11945461 11980504 - MGP_129S1SvImJ_P0081694 Sult2a8 protein_coding protein_coding MGP_129S1SvImJ_T0087297.1 MGP_129S1SvImJ_G0033146.1 mouse_genomes_project 7 144083505 144101971 + MGP_129S1SvImJ_P0087297 Dpysl4 protein_coding protein_coding MGP_129S1SvImJ_T0087298.1 MGP_129S1SvImJ_G0033146.1 mouse_genomes_project 7 144083506 144091970 + Dpysl4 protein_coding processed_transcript MGP_129S1SvImJ_T0087299.1 MGP_129S1SvImJ_G0033146.1 mouse_genomes_project 7 144083531 144099298 + Dpysl4 protein_coding retained_intron MGP_129S1SvImJ_T0087300.1 MGP_129S1SvImJ_G0033146.1 mouse_genomes_project 7 144083532 144099286 + Dpysl4 protein_coding retained_intron MGP_129S1SvImJ_T0087301.1 MGP_129S1SvImJ_G0033146.1 mouse_genomes_project 7 144085869 144091936 + MGP_129S1SvImJ_P0087301 Dpysl4 protein_coding protein_coding MGP_129S1SvImJ_T0087302.1 MGP_129S1SvImJ_G0033146.1 mouse_genomes_project 7 144086751 144099280 + MGP_129S1SvImJ_P0087302 Dpysl4 protein_coding protein_coding MGP_129S1SvImJ_T0085961.1 MGP_129S1SvImJ_G0032875.1 mouse_genomes_project 7 117026741 117029740 - MGP_129S1SvImJ_P0085961 Pth protein_coding protein_coding MGP_129S1SvImJ_T0087230.1 MGP_129S1SvImJ_G0033125.1 mouse_genomes_project 7 138479042 138538079 - MGP_129S1SvImJ_P0087230 Dhx32 protein_coding protein_coding MGP_129S1SvImJ_T0087231.1 MGP_129S1SvImJ_G0033125.1 mouse_genomes_project 7 138479046 138521574 - Dhx32 protein_coding processed_transcript MGP_129S1SvImJ_T0087232.1 MGP_129S1SvImJ_G0033125.1 mouse_genomes_project 7 138479209 138538021 - MGP_129S1SvImJ_P0087232 Dhx32 protein_coding protein_coding MGP_129S1SvImJ_T0087233.1 MGP_129S1SvImJ_G0033125.1 mouse_genomes_project 7 138479210 138544871 - MGP_129S1SvImJ_P0087233 Dhx32 protein_coding protein_coding MGP_129S1SvImJ_T0087234.1 MGP_129S1SvImJ_G0033125.1 mouse_genomes_project 7 138481144 138491027 - Dhx32 protein_coding processed_transcript MGP_129S1SvImJ_T0087235.1 MGP_129S1SvImJ_G0033125.1 mouse_genomes_project 7 138509899 138520777 - Dhx32 protein_coding processed_transcript MGP_129S1SvImJ_T0087236.1 MGP_129S1SvImJ_G0033125.1 mouse_genomes_project 7 138510199 138521134 - MGP_129S1SvImJ_P0087236 Dhx32 protein_coding protein_coding MGP_129S1SvImJ_T0087237.1 MGP_129S1SvImJ_G0033125.1 mouse_genomes_project 7 138510344 138537963 - MGP_129S1SvImJ_P0087237 Dhx32 protein_coding protein_coding MGP_129S1SvImJ_T0087238.1 MGP_129S1SvImJ_G0033125.1 mouse_genomes_project 7 138520982 138537785 - MGP_129S1SvImJ_P0087238 Dhx32 protein_coding protein_coding MGP_129S1SvImJ_T0082440.1 MGP_129S1SvImJ_G0031899.1 mouse_genomes_project 7 25782292 25798662 - MGP_129S1SvImJ_P0082440 Gm21983 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0008848.1 MGP_129S1SvImJ_G0007151.1 mouse_genomes_project 7 36026146 36029889 + Gm29129 lincRNA lincRNA MGP_129S1SvImJ_T0015899.1 MGP_129S1SvImJ_G0013988.1 mouse_genomes_project 7 113914221 113914787 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100059.1 MGP_129S1SvImJ_G0038126.1 mouse_genomes_project 7 56499330 56499392 + Gm26482 snRNA snRNA MGP_129S1SvImJ_T0008978.1 MGP_129S1SvImJ_G0007239.1 mouse_genomes_project 7 96915055 96917644 - Gm44601 lincRNA lincRNA MGP_129S1SvImJ_T0085777.1 MGP_129S1SvImJ_G0032820.1 mouse_genomes_project 7 111847713 111848706 + MGP_129S1SvImJ_P0085777 Olfr498 protein_coding protein_coding MGP_129S1SvImJ_T0083500.1 MGP_129S1SvImJ_G0032142.1 mouse_genomes_project 7 43833514 43840533 + MGP_129S1SvImJ_P0083500 Klk9 protein_coding protein_coding MGP_129S1SvImJ_T0083813.1 MGP_129S1SvImJ_G0032226.1 mouse_genomes_project 7 45757721 45799639 + MGP_129S1SvImJ_P0083813 Tulp2 protein_coding protein_coding MGP_129S1SvImJ_T0083814.1 MGP_129S1SvImJ_G0032226.1 mouse_genomes_project 7 45757722 45799092 + MGP_129S1SvImJ_P0083814 Tulp2 protein_coding protein_coding MGP_129S1SvImJ_T0083815.1 MGP_129S1SvImJ_G0032226.1 mouse_genomes_project 7 45757823 45799094 + MGP_129S1SvImJ_P0083815 Tulp2 protein_coding protein_coding MGP_129S1SvImJ_T0083825.1 MGP_129S1SvImJ_G0032226.1 mouse_genomes_project 7 45788027 45799306 + MGP_129S1SvImJ_P0083825 Tulp2 protein_coding protein_coding MGP_129S1SvImJ_T0083826.1 MGP_129S1SvImJ_G0032226.1 mouse_genomes_project 7 45788045 45799099 + MGP_129S1SvImJ_P0083826 Tulp2 protein_coding protein_coding MGP_129S1SvImJ_T0083827.1 MGP_129S1SvImJ_G0032226.1 mouse_genomes_project 7 45788902 45791009 + MGP_129S1SvImJ_P0083827 Tulp2 protein_coding protein_coding MGP_129S1SvImJ_T0083828.1 MGP_129S1SvImJ_G0032226.1 mouse_genomes_project 7 45788923 45799094 + MGP_129S1SvImJ_P0083828 Tulp2 protein_coding protein_coding MGP_129S1SvImJ_T0083829.1 MGP_129S1SvImJ_G0032226.1 mouse_genomes_project 7 45788927 45794659 + MGP_129S1SvImJ_P0083829 Tulp2 protein_coding protein_coding MGP_129S1SvImJ_T0083830.1 MGP_129S1SvImJ_G0032226.1 mouse_genomes_project 7 45788958 45800344 + MGP_129S1SvImJ_P0083830 Tulp2 protein_coding protein_coding MGP_129S1SvImJ_T0083831.1 MGP_129S1SvImJ_G0032226.1 mouse_genomes_project 7 45790129 45790642 + Tulp2 protein_coding processed_transcript MGP_129S1SvImJ_T0083224.1 MGP_129S1SvImJ_G0032076.1 mouse_genomes_project 7 33512072 33512528 + MGP_129S1SvImJ_P0083224 Gm6096 protein_coding protein_coding MGP_129S1SvImJ_T0087149.1 MGP_129S1SvImJ_G0033108.1 mouse_genomes_project 7 136199666 136212312 + MGP_129S1SvImJ_P0087149 Bub3 protein_coding protein_coding MGP_129S1SvImJ_T0085497.1 MGP_129S1SvImJ_G0032666.1 mouse_genomes_project 7 106693504 106694446 + MGP_129S1SvImJ_P0085497 Olfr615 protein_coding protein_coding MGP_129S1SvImJ_T0010940.1 MGP_129S1SvImJ_G0009056.1 mouse_genomes_project 7 130862647 130862706 - Mir7059 miRNA miRNA MGP_129S1SvImJ_T0085493.1 MGP_129S1SvImJ_G0032662.1 mouse_genomes_project 7 106629521 106630481 - MGP_129S1SvImJ_P0085493 Olfr609 protein_coding protein_coding MGP_129S1SvImJ_T0081448.1 MGP_129S1SvImJ_G0031571.1 mouse_genomes_project 7 1909260 1917456 - MGP_129S1SvImJ_P0081448 Sbk2 protein_coding protein_coding MGP_129S1SvImJ_T0081449.1 MGP_129S1SvImJ_G0031571.1 mouse_genomes_project 7 1910204 1917459 - MGP_129S1SvImJ_P0081449 Sbk2 protein_coding protein_coding MGP_129S1SvImJ_T0081450.1 MGP_129S1SvImJ_G0031571.1 mouse_genomes_project 7 1910645 1917465 - MGP_129S1SvImJ_P0081450 Sbk2 protein_coding protein_coding MGP_129S1SvImJ_T0081451.1 MGP_129S1SvImJ_G0031571.1 mouse_genomes_project 7 1914198 1917501 - Sbk2 protein_coding processed_transcript MGP_129S1SvImJ_T0085858.1 MGP_129S1SvImJ_G0032855.1 mouse_genomes_project 7 113586964 113606736 + MGP_129S1SvImJ_P0085858 Wee1 protein_coding protein_coding MGP_129S1SvImJ_T0010941.1 MGP_129S1SvImJ_G0009057.1 mouse_genomes_project 7 131362145 131362235 - Gm44343 miRNA miRNA MGP_129S1SvImJ_T0086255.1 MGP_129S1SvImJ_G0032944.1 mouse_genomes_project 7 125774301 125808328 + MGP_129S1SvImJ_P0086255 Scnn1g protein_coding protein_coding MGP_129S1SvImJ_T0084475.1 MGP_129S1SvImJ_G0032381.1 mouse_genomes_project 7 80734839 80749614 + Aen protein_coding processed_transcript MGP_129S1SvImJ_T0084476.1 MGP_129S1SvImJ_G0032381.1 mouse_genomes_project 7 80734912 80749614 + MGP_129S1SvImJ_P0084476 Aen protein_coding protein_coding MGP_129S1SvImJ_T0084477.1 MGP_129S1SvImJ_G0032381.1 mouse_genomes_project 7 80734919 80746792 + MGP_129S1SvImJ_P0084477 Aen protein_coding protein_coding MGP_129S1SvImJ_T0084478.1 MGP_129S1SvImJ_G0032381.1 mouse_genomes_project 7 80734994 80746789 + MGP_129S1SvImJ_P0084478 Aen protein_coding protein_coding MGP_129S1SvImJ_T0084479.1 MGP_129S1SvImJ_G0032381.1 mouse_genomes_project 7 80737016 80738932 + MGP_129S1SvImJ_P0084479 Aen protein_coding protein_coding MGP_129S1SvImJ_T0084480.1 MGP_129S1SvImJ_G0032381.1 mouse_genomes_project 7 80738470 80742089 + Aen protein_coding processed_transcript MGP_129S1SvImJ_T0084481.1 MGP_129S1SvImJ_G0032381.1 mouse_genomes_project 7 80738688 80743452 + MGP_129S1SvImJ_P0084481 Aen protein_coding protein_coding MGP_129S1SvImJ_T0083182.1 MGP_129S1SvImJ_G0032064.1 mouse_genomes_project 7 30348084 30349387 - MGP_129S1SvImJ_P0083182 Scgb1b2 protein_coding protein_coding MGP_129S1SvImJ_T0018439.1 MGP_129S1SvImJ_G0015684.1 mouse_genomes_project 7 112858218 112866019 + 1700095J03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0082719.1 MGP_129S1SvImJ_G0031970.1 mouse_genomes_project 7 27895438 27935115 - MGP_129S1SvImJ_P0082719 Ryr1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0082720.1 MGP_129S1SvImJ_G0031970.1 mouse_genomes_project 7 27895439 28026366 - MGP_129S1SvImJ_P0082720 Ryr1 protein_coding protein_coding MGP_129S1SvImJ_T0082721.1 MGP_129S1SvImJ_G0031970.1 mouse_genomes_project 7 27895443 28026366 - MGP_129S1SvImJ_P0082721 Ryr1 protein_coding protein_coding MGP_129S1SvImJ_T0082722.1 MGP_129S1SvImJ_G0031970.1 mouse_genomes_project 7 27937346 28026230 - MGP_129S1SvImJ_P0082722 Ryr1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0082206.1 MGP_129S1SvImJ_G0031841.1 mouse_genomes_project 7 23081369 23093984 - MGP_129S1SvImJ_P0082206 Gm4763 protein_coding protein_coding MGP_129S1SvImJ_T0082207.1 MGP_129S1SvImJ_G0031841.1 mouse_genomes_project 7 23090671 23092313 - Gm4763 protein_coding processed_transcript MGP_129S1SvImJ_T0085765.1 MGP_129S1SvImJ_G0032808.1 mouse_genomes_project 7 111420435 111421464 - MGP_129S1SvImJ_P0085765 Olfr480 protein_coding protein_coding MGP_129S1SvImJ_T0087809.1 MGP_129S1SvImJ_G0033270.1 mouse_genomes_project 7 148350124 148351969 + MGP_129S1SvImJ_P0087809 Tssc4 protein_coding protein_coding MGP_129S1SvImJ_T0087810.1 MGP_129S1SvImJ_G0033270.1 mouse_genomes_project 7 148350216 148351422 + MGP_129S1SvImJ_P0087810 Tssc4 protein_coding protein_coding MGP_129S1SvImJ_T0087811.1 MGP_129S1SvImJ_G0033270.1 mouse_genomes_project 7 148350243 148351963 + MGP_129S1SvImJ_P0087811 Tssc4 protein_coding protein_coding MGP_129S1SvImJ_T0087812.1 MGP_129S1SvImJ_G0033270.1 mouse_genomes_project 7 148350243 148351963 + MGP_129S1SvImJ_P0087812 Tssc4 protein_coding protein_coding MGP_129S1SvImJ_T0087813.1 MGP_129S1SvImJ_G0033270.1 mouse_genomes_project 7 148350299 148351421 + MGP_129S1SvImJ_P0087813 Tssc4 protein_coding protein_coding MGP_129S1SvImJ_T0087814.1 MGP_129S1SvImJ_G0033270.1 mouse_genomes_project 7 148350419 148351485 + MGP_129S1SvImJ_P0087814 Tssc4 protein_coding protein_coding MGP_129S1SvImJ_T0086822.1 MGP_129S1SvImJ_G0033045.1 mouse_genomes_project 7 131944615 131950828 - MGP_129S1SvImJ_P0086822 Ccdc189 protein_coding protein_coding MGP_129S1SvImJ_T0086823.1 MGP_129S1SvImJ_G0033045.1 mouse_genomes_project 7 131945592 131948573 - MGP_129S1SvImJ_P0086823 Ccdc189 protein_coding protein_coding MGP_129S1SvImJ_T0086824.1 MGP_129S1SvImJ_G0033045.1 mouse_genomes_project 7 131945619 131947955 - Ccdc189 protein_coding retained_intron MGP_129S1SvImJ_T0086825.1 MGP_129S1SvImJ_G0033045.1 mouse_genomes_project 7 131947445 131950402 - Ccdc189 protein_coding retained_intron MGP_129S1SvImJ_T0086826.1 MGP_129S1SvImJ_G0033045.1 mouse_genomes_project 7 131949296 131950613 - Ccdc189 protein_coding retained_intron MGP_129S1SvImJ_T0081399.1 MGP_129S1SvImJ_G0031557.1 mouse_genomes_project 7 1667572 1674979 + MGP_129S1SvImJ_P0081399 Suv420h2 protein_coding protein_coding MGP_129S1SvImJ_T0081400.1 MGP_129S1SvImJ_G0031557.1 mouse_genomes_project 7 1667610 1669547 + Suv420h2 protein_coding retained_intron MGP_129S1SvImJ_T0081401.1 MGP_129S1SvImJ_G0031557.1 mouse_genomes_project 7 1667613 1670512 + MGP_129S1SvImJ_P0081401 Suv420h2 protein_coding protein_coding MGP_129S1SvImJ_T0081402.1 MGP_129S1SvImJ_G0031557.1 mouse_genomes_project 7 1667624 1674979 + MGP_129S1SvImJ_P0081402 Suv420h2 protein_coding protein_coding MGP_129S1SvImJ_T0081403.1 MGP_129S1SvImJ_G0031557.1 mouse_genomes_project 7 1667642 1674979 + MGP_129S1SvImJ_P0081403 Suv420h2 protein_coding protein_coding MGP_129S1SvImJ_T0081404.1 MGP_129S1SvImJ_G0031557.1 mouse_genomes_project 7 1669093 1669996 + Suv420h2 protein_coding retained_intron MGP_129S1SvImJ_T0081405.1 MGP_129S1SvImJ_G0031557.1 mouse_genomes_project 7 1669308 1674363 + MGP_129S1SvImJ_P0081405 Suv420h2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081406.1 MGP_129S1SvImJ_G0031557.1 mouse_genomes_project 7 1669782 1673373 + Suv420h2 protein_coding retained_intron MGP_129S1SvImJ_T0081407.1 MGP_129S1SvImJ_G0031557.1 mouse_genomes_project 7 1669912 1670927 + Suv420h2 protein_coding retained_intron MGP_129S1SvImJ_T0081408.1 MGP_129S1SvImJ_G0031557.1 mouse_genomes_project 7 1670115 1671051 + Suv420h2 protein_coding retained_intron MGP_129S1SvImJ_T0081409.1 MGP_129S1SvImJ_G0031557.1 mouse_genomes_project 7 1670202 1673586 + Suv420h2 protein_coding retained_intron MGP_129S1SvImJ_T0081410.1 MGP_129S1SvImJ_G0031557.1 mouse_genomes_project 7 1673272 1674061 + MGP_129S1SvImJ_P0081410 Suv420h2 protein_coding protein_coding MGP_129S1SvImJ_T0081688.1 MGP_129S1SvImJ_G0031680.1 mouse_genomes_project 7 11547913 11622377 - MGP_129S1SvImJ_P0081688 Sult2a3 protein_coding protein_coding MGP_129S1SvImJ_T0002277.1 MGP_129S1SvImJ_G0002189.1 mouse_genomes_project 7 75089221 75091086 - TEC TEC MGP_129S1SvImJ_T0084855.1 MGP_129S1SvImJ_G0032460.1 mouse_genomes_project 7 86787608 86857433 - MGP_129S1SvImJ_P0084855 Zfand6 protein_coding protein_coding MGP_129S1SvImJ_T0084856.1 MGP_129S1SvImJ_G0032460.1 mouse_genomes_project 7 86787608 86857443 - MGP_129S1SvImJ_P0084856 Zfand6 protein_coding protein_coding MGP_129S1SvImJ_T0084364.1 MGP_129S1SvImJ_G0032360.1 mouse_genomes_project 7 68913728 68940663 + Ttc23 protein_coding retained_intron MGP_129S1SvImJ_T0084365.1 MGP_129S1SvImJ_G0032360.1 mouse_genomes_project 7 68913728 68998117 + MGP_129S1SvImJ_P0084365 Ttc23 protein_coding protein_coding MGP_129S1SvImJ_T0084366.1 MGP_129S1SvImJ_G0032360.1 mouse_genomes_project 7 68913743 68998119 + MGP_129S1SvImJ_P0084366 Ttc23 protein_coding protein_coding MGP_129S1SvImJ_T0084367.1 MGP_129S1SvImJ_G0032360.1 mouse_genomes_project 7 68913768 68998119 + Ttc23 protein_coding processed_transcript MGP_129S1SvImJ_T0084368.1 MGP_129S1SvImJ_G0032360.1 mouse_genomes_project 7 68913772 68915514 + Ttc23 protein_coding processed_transcript MGP_129S1SvImJ_T0084369.1 MGP_129S1SvImJ_G0032360.1 mouse_genomes_project 7 68913778 68927093 + Ttc23 protein_coding processed_transcript MGP_129S1SvImJ_T0084370.1 MGP_129S1SvImJ_G0032360.1 mouse_genomes_project 7 68915476 68949742 + Ttc23 protein_coding processed_transcript MGP_129S1SvImJ_T0084371.1 MGP_129S1SvImJ_G0032360.1 mouse_genomes_project 7 68921523 68949992 + Ttc23 protein_coding processed_transcript MGP_129S1SvImJ_T0084372.1 MGP_129S1SvImJ_G0032360.1 mouse_genomes_project 7 68921793 68998116 + MGP_129S1SvImJ_P0084372 Ttc23 protein_coding protein_coding MGP_129S1SvImJ_T0084373.1 MGP_129S1SvImJ_G0032360.1 mouse_genomes_project 7 68927273 69001610 + MGP_129S1SvImJ_P0084373 Ttc23 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0084374.1 MGP_129S1SvImJ_G0032360.1 mouse_genomes_project 7 68933260 68938069 + Ttc23 protein_coding processed_transcript MGP_129S1SvImJ_T0084375.1 MGP_129S1SvImJ_G0032360.1 mouse_genomes_project 7 68938087 68969437 + Ttc23 protein_coding processed_transcript MGP_129S1SvImJ_T0084376.1 MGP_129S1SvImJ_G0032360.1 mouse_genomes_project 7 68949965 68997595 + Ttc23 protein_coding processed_transcript MGP_129S1SvImJ_T0084377.1 MGP_129S1SvImJ_G0032360.1 mouse_genomes_project 7 68996803 68997557 + Ttc23 protein_coding processed_transcript MGP_129S1SvImJ_T0085771.1 MGP_129S1SvImJ_G0032814.1 mouse_genomes_project 7 111655163 111656108 - MGP_129S1SvImJ_P0085771 protein_coding protein_coding MGP_129S1SvImJ_T0086842.1 MGP_129S1SvImJ_G0033048.1 mouse_genomes_project 7 132022560 132078813 - MGP_129S1SvImJ_P0086842 Bcl7c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086843.1 MGP_129S1SvImJ_G0033048.1 mouse_genomes_project 7 132028064 132078667 - MGP_129S1SvImJ_P0086843 Bcl7c protein_coding protein_coding MGP_129S1SvImJ_T0086844.1 MGP_129S1SvImJ_G0033048.1 mouse_genomes_project 7 132028220 132078490 - MGP_129S1SvImJ_P0086844 Bcl7c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086845.1 MGP_129S1SvImJ_G0033048.1 mouse_genomes_project 7 132074999 132078555 - MGP_129S1SvImJ_P0086845 Bcl7c protein_coding protein_coding MGP_129S1SvImJ_T0086846.1 MGP_129S1SvImJ_G0033048.1 mouse_genomes_project 7 132075018 132077328 - MGP_129S1SvImJ_P0086846 Bcl7c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086847.1 MGP_129S1SvImJ_G0033048.1 mouse_genomes_project 7 132075824 132078103 - Bcl7c protein_coding processed_transcript MGP_129S1SvImJ_T0085386.1 MGP_129S1SvImJ_G0032599.1 mouse_genomes_project 7 105093438 105127718 + MGP_129S1SvImJ_P0085386 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085387.1 MGP_129S1SvImJ_G0032599.1 mouse_genomes_project 7 105093438 105127270 + MGP_129S1SvImJ_P0085387 protein_coding protein_coding MGP_129S1SvImJ_T0085389.1 MGP_129S1SvImJ_G0032599.1 mouse_genomes_project 7 105093503 105127188 + MGP_129S1SvImJ_P0085389 protein_coding protein_coding MGP_129S1SvImJ_T0085390.1 MGP_129S1SvImJ_G0032599.1 mouse_genomes_project 7 105105272 105127188 + MGP_129S1SvImJ_P0085390 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085391.1 MGP_129S1SvImJ_G0032599.1 mouse_genomes_project 7 105105276 105127180 + MGP_129S1SvImJ_P0085391 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0100099.1 MGP_129S1SvImJ_G0038166.1 mouse_genomes_project 7 146275636 146275745 - Gm24962 snRNA snRNA MGP_129S1SvImJ_T0084012.1 MGP_129S1SvImJ_G0032275.1 mouse_genomes_project 7 47264650 47281577 + MGP_129S1SvImJ_P0084012 Ldhc protein_coding protein_coding MGP_129S1SvImJ_T0084013.1 MGP_129S1SvImJ_G0032275.1 mouse_genomes_project 7 47264769 47279223 + MGP_129S1SvImJ_P0084013 Ldhc protein_coding protein_coding MGP_129S1SvImJ_T0084014.1 MGP_129S1SvImJ_G0032275.1 mouse_genomes_project 7 47264856 47279909 + MGP_129S1SvImJ_P0084014 Ldhc protein_coding protein_coding MGP_129S1SvImJ_T0082747.1 MGP_129S1SvImJ_G0031973.1 mouse_genomes_project 7 28066223 28076013 - MGP_129S1SvImJ_P0082747 Spred3 protein_coding protein_coding MGP_129S1SvImJ_T0082748.1 MGP_129S1SvImJ_G0031973.1 mouse_genomes_project 7 28073306 28077230 - Spred3 protein_coding retained_intron MGP_129S1SvImJ_T0085764.1 MGP_129S1SvImJ_G0032807.1 mouse_genomes_project 7 111410602 111411713 + MGP_129S1SvImJ_P0085764 Olfr479 protein_coding protein_coding MGP_129S1SvImJ_T0009038.1 MGP_129S1SvImJ_G0007275.1 mouse_genomes_project 7 131628996 131631293 + Gm44728 lincRNA lincRNA MGP_129S1SvImJ_T0009039.1 MGP_129S1SvImJ_G0007275.1 mouse_genomes_project 7 131629482 131631705 + Gm44728 lincRNA lincRNA MGP_129S1SvImJ_T0085893.1 MGP_129S1SvImJ_G0032862.1 mouse_genomes_project 7 114375335 114434255 - MGP_129S1SvImJ_P0085893 Mrvi1 protein_coding protein_coding MGP_129S1SvImJ_T0085894.1 MGP_129S1SvImJ_G0032862.1 mouse_genomes_project 7 114375341 114454468 - MGP_129S1SvImJ_P0085894 Mrvi1 protein_coding protein_coding MGP_129S1SvImJ_T0085895.1 MGP_129S1SvImJ_G0032862.1 mouse_genomes_project 7 114378428 114454173 - MGP_129S1SvImJ_P0085895 Mrvi1 protein_coding protein_coding MGP_129S1SvImJ_T0085896.1 MGP_129S1SvImJ_G0032862.1 mouse_genomes_project 7 114427647 114431555 - Mrvi1 protein_coding processed_transcript MGP_129S1SvImJ_T0085897.1 MGP_129S1SvImJ_G0032862.1 mouse_genomes_project 7 114432201 114434524 - Mrvi1 protein_coding retained_intron MGP_129S1SvImJ_T0085898.1 MGP_129S1SvImJ_G0032862.1 mouse_genomes_project 7 114434236 114490440 - MGP_129S1SvImJ_P0085898 Mrvi1 protein_coding protein_coding MGP_129S1SvImJ_T0082640.1 MGP_129S1SvImJ_G0031949.1 mouse_genomes_project 7 27304996 27306361 - MGP_129S1SvImJ_P0082640 protein_coding protein_coding MGP_129S1SvImJ_T0082946.1 MGP_129S1SvImJ_G0032024.1 mouse_genomes_project 7 29520125 29532772 - MGP_129S1SvImJ_P0082946 Arhgap33 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0084106.1 MGP_129S1SvImJ_G0032310.1 mouse_genomes_project 7 55652332 56050383 + Luzp2 protein_coding retained_intron MGP_129S1SvImJ_T0084107.1 MGP_129S1SvImJ_G0032310.1 mouse_genomes_project 7 55652449 56069118 + MGP_129S1SvImJ_P0084107 Luzp2 protein_coding protein_coding MGP_129S1SvImJ_T0085345.1 MGP_129S1SvImJ_G0032591.1 mouse_genomes_project 7 104895301 104915422 + MGP_129S1SvImJ_P0085345 Anapc15 protein_coding protein_coding MGP_129S1SvImJ_T0085346.1 MGP_129S1SvImJ_G0032591.1 mouse_genomes_project 7 104911908 104913904 + Anapc15 protein_coding processed_transcript MGP_129S1SvImJ_T0085347.1 MGP_129S1SvImJ_G0032591.1 mouse_genomes_project 7 104912218 104915419 + MGP_129S1SvImJ_P0085347 Anapc15 protein_coding protein_coding MGP_129S1SvImJ_T0085348.1 MGP_129S1SvImJ_G0032591.1 mouse_genomes_project 7 104912286 104914106 + Anapc15 protein_coding retained_intron MGP_129S1SvImJ_T0085349.1 MGP_129S1SvImJ_G0032591.1 mouse_genomes_project 7 104912294 104915359 + MGP_129S1SvImJ_P0085349 Anapc15 protein_coding protein_coding MGP_129S1SvImJ_T0085350.1 MGP_129S1SvImJ_G0032591.1 mouse_genomes_project 7 104912295 104917518 + MGP_129S1SvImJ_P0085350 Anapc15 protein_coding protein_coding MGP_129S1SvImJ_T0085351.1 MGP_129S1SvImJ_G0032591.1 mouse_genomes_project 7 104912306 104915417 + Anapc15 protein_coding retained_intron MGP_129S1SvImJ_T0085352.1 MGP_129S1SvImJ_G0032591.1 mouse_genomes_project 7 104912741 104913907 + Anapc15 protein_coding processed_transcript MGP_129S1SvImJ_T0085353.1 MGP_129S1SvImJ_G0032591.1 mouse_genomes_project 7 104912839 104914921 + MGP_129S1SvImJ_P0085353 Anapc15 protein_coding protein_coding MGP_129S1SvImJ_T0085354.1 MGP_129S1SvImJ_G0032591.1 mouse_genomes_project 7 104913266 104914457 + Anapc15 protein_coding retained_intron MGP_129S1SvImJ_T0085355.1 MGP_129S1SvImJ_G0032591.1 mouse_genomes_project 7 104913610 104917724 + MGP_129S1SvImJ_P0085355 Anapc15 protein_coding protein_coding MGP_129S1SvImJ_T0085356.1 MGP_129S1SvImJ_G0032591.1 mouse_genomes_project 7 104913673 104917518 + MGP_129S1SvImJ_P0085356 Anapc15 protein_coding protein_coding MGP_129S1SvImJ_T0085358.1 MGP_129S1SvImJ_G0032591.1 mouse_genomes_project 7 104914870 104915423 + Anapc15 protein_coding processed_transcript MGP_129S1SvImJ_T0005308.1 MGP_129S1SvImJ_G0004504.1 mouse_genomes_project 7 129781725 129783067 - Gm44876 antisense antisense MGP_129S1SvImJ_T0082326.1 MGP_129S1SvImJ_G0031867.1 mouse_genomes_project 7 23943256 23961911 - MGP_129S1SvImJ_P0082326 Ceacam1 protein_coding protein_coding MGP_129S1SvImJ_T0082327.1 MGP_129S1SvImJ_G0031867.1 mouse_genomes_project 7 23944062 23961898 - MGP_129S1SvImJ_P0082327 Ceacam1 protein_coding protein_coding MGP_129S1SvImJ_T0082328.1 MGP_129S1SvImJ_G0031867.1 mouse_genomes_project 7 23945238 23961863 - MGP_129S1SvImJ_P0082328 Ceacam1 protein_coding protein_coding MGP_129S1SvImJ_T0082329.1 MGP_129S1SvImJ_G0031867.1 mouse_genomes_project 7 23945238 23961863 - MGP_129S1SvImJ_P0082329 Ceacam1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082330.1 MGP_129S1SvImJ_G0031867.1 mouse_genomes_project 7 23945238 23961863 - MGP_129S1SvImJ_P0082330 Ceacam1 protein_coding protein_coding MGP_129S1SvImJ_T0082331.1 MGP_129S1SvImJ_G0031867.1 mouse_genomes_project 7 23946005 23961898 - MGP_129S1SvImJ_P0082331 Ceacam1 protein_coding protein_coding MGP_129S1SvImJ_T0082332.1 MGP_129S1SvImJ_G0031867.1 mouse_genomes_project 7 23953354 23961034 - Ceacam1 protein_coding retained_intron MGP_129S1SvImJ_T0082333.1 MGP_129S1SvImJ_G0031867.1 mouse_genomes_project 7 23953355 23961908 - Ceacam1 protein_coding retained_intron MGP_129S1SvImJ_T0005311.1 MGP_129S1SvImJ_G0004506.1 mouse_genomes_project 7 131346575 131350399 + Gm31749 antisense antisense MGP_129S1SvImJ_T0082283.1 MGP_129S1SvImJ_G0031857.1 mouse_genomes_project 7 23680624 23690201 - MGP_129S1SvImJ_P0082283 Gsk3a protein_coding protein_coding MGP_129S1SvImJ_T0082284.1 MGP_129S1SvImJ_G0031857.1 mouse_genomes_project 7 23680624 23690201 - MGP_129S1SvImJ_P0082284 Gsk3a protein_coding protein_coding MGP_129S1SvImJ_T0082285.1 MGP_129S1SvImJ_G0031857.1 mouse_genomes_project 7 23681834 23683614 - Gsk3a protein_coding retained_intron MGP_129S1SvImJ_T0085513.1 MGP_129S1SvImJ_G0032682.1 mouse_genomes_project 7 107022222 107023670 - MGP_129S1SvImJ_P0085513 protein_coding protein_coding MGP_129S1SvImJ_T0084896.1 MGP_129S1SvImJ_G0032490.1 mouse_genomes_project 7 89764806 89845053 - MGP_129S1SvImJ_P0084896 Tyr protein_coding protein_coding MGP_129S1SvImJ_T0101983.1 MGP_129S1SvImJ_G0039854.1 mouse_genomes_project 7 107574329 107576784 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101984.1 MGP_129S1SvImJ_G0039854.1 mouse_genomes_project 7 107575022 107576263 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0084025.1 MGP_129S1SvImJ_G0032280.1 mouse_genomes_project 7 47466988 47471121 + MGP_129S1SvImJ_P0084025 Tmem86a protein_coding protein_coding MGP_129S1SvImJ_T0015794.1 MGP_129S1SvImJ_G0013883.1 mouse_genomes_project 7 42108353 42108475 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085376.1 MGP_129S1SvImJ_G0032597.1 mouse_genomes_project 7 105044045 105092853 - MGP_129S1SvImJ_P0085376 Rnf121 protein_coding protein_coding MGP_129S1SvImJ_T0085377.1 MGP_129S1SvImJ_G0032597.1 mouse_genomes_project 7 105046290 105087070 - MGP_129S1SvImJ_P0085377 Rnf121 protein_coding protein_coding MGP_129S1SvImJ_T0085378.1 MGP_129S1SvImJ_G0032597.1 mouse_genomes_project 7 105046591 105050618 - Rnf121 protein_coding retained_intron MGP_129S1SvImJ_T0085379.1 MGP_129S1SvImJ_G0032597.1 mouse_genomes_project 7 105055438 105092842 - MGP_129S1SvImJ_P0085379 Rnf121 protein_coding protein_coding MGP_129S1SvImJ_T0085380.1 MGP_129S1SvImJ_G0032597.1 mouse_genomes_project 7 105061743 105092883 - Rnf121 protein_coding processed_transcript MGP_129S1SvImJ_T0085381.1 MGP_129S1SvImJ_G0032597.1 mouse_genomes_project 7 105065966 105092769 - MGP_129S1SvImJ_P0085381 Rnf121 protein_coding protein_coding MGP_129S1SvImJ_T0086140.1 MGP_129S1SvImJ_G0032910.1 mouse_genomes_project 7 123359164 123376942 - MGP_129S1SvImJ_P0086140 Umod protein_coding protein_coding MGP_129S1SvImJ_T0002324.1 MGP_129S1SvImJ_G0002235.1 mouse_genomes_project 7 126802346 126803974 - TEC TEC MGP_129S1SvImJ_T0015898.1 MGP_129S1SvImJ_G0013987.1 mouse_genomes_project 7 112806164 112807562 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0083441.1 MGP_129S1SvImJ_G0032122.1 mouse_genomes_project 7 43444028 43449937 + MGP_129S1SvImJ_P0083441 Lim2 protein_coding protein_coding MGP_129S1SvImJ_T0084561.1 MGP_129S1SvImJ_G0032394.1 mouse_genomes_project 7 81642007 81648945 - MGP_129S1SvImJ_P0084561 Pex11a protein_coding protein_coding MGP_129S1SvImJ_T0084562.1 MGP_129S1SvImJ_G0032394.1 mouse_genomes_project 7 81643139 81648996 - Pex11a protein_coding processed_transcript MGP_129S1SvImJ_T0084563.1 MGP_129S1SvImJ_G0032394.1 mouse_genomes_project 7 81643300 81644775 - Pex11a protein_coding retained_intron MGP_129S1SvImJ_T0084564.1 MGP_129S1SvImJ_G0032394.1 mouse_genomes_project 7 81643822 81646407 - Pex11a protein_coding retained_intron MGP_129S1SvImJ_T0011714.1 MGP_129S1SvImJ_G0009830.1 mouse_genomes_project 7 118630089 118630407 + Gm22669 misc_RNA misc_RNA MGP_129S1SvImJ_T0083278.1 MGP_129S1SvImJ_G0032086.1 mouse_genomes_project 7 34716206 34782980 + MGP_129S1SvImJ_P0083278 Rhpn2 protein_coding protein_coding MGP_129S1SvImJ_T0083279.1 MGP_129S1SvImJ_G0032086.1 mouse_genomes_project 7 34716366 34782976 + MGP_129S1SvImJ_P0083279 Rhpn2 protein_coding protein_coding MGP_129S1SvImJ_T0083280.1 MGP_129S1SvImJ_G0032086.1 mouse_genomes_project 7 34769863 34772201 + Rhpn2 protein_coding retained_intron MGP_129S1SvImJ_T0083281.1 MGP_129S1SvImJ_G0032086.1 mouse_genomes_project 7 34773101 34775831 + Rhpn2 protein_coding retained_intron MGP_129S1SvImJ_T0085018.1 MGP_129S1SvImJ_G0032523.1 mouse_genomes_project 7 100092305 100101280 + MGP_129S1SvImJ_P0085018 Ndufc2 protein_coding protein_coding MGP_129S1SvImJ_T0085019.1 MGP_129S1SvImJ_G0032523.1 mouse_genomes_project 7 100092405 100100558 + MGP_129S1SvImJ_P0085019 Ndufc2 protein_coding protein_coding MGP_129S1SvImJ_T0086673.1 MGP_129S1SvImJ_G0033012.1 mouse_genomes_project 7 131298538 131328021 - MGP_129S1SvImJ_P0086673 Mvp protein_coding protein_coding MGP_129S1SvImJ_T0086674.1 MGP_129S1SvImJ_G0033012.1 mouse_genomes_project 7 131311783 131325265 - MGP_129S1SvImJ_P0086674 Mvp protein_coding protein_coding MGP_129S1SvImJ_T0086676.1 MGP_129S1SvImJ_G0033012.1 mouse_genomes_project 7 131323128 131327950 - Mvp protein_coding retained_intron MGP_129S1SvImJ_T0086974.1 MGP_129S1SvImJ_G0033076.1 mouse_genomes_project 7 132640859 132644433 - MGP_129S1SvImJ_P0086974 9130023H24Rik protein_coding protein_coding MGP_129S1SvImJ_T0102683.1 MGP_129S1SvImJ_G0040516.1 mouse_genomes_project 7 9414184 9416882 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085786.1 MGP_129S1SvImJ_G0032829.1 mouse_genomes_project 7 112140579 112141509 + MGP_129S1SvImJ_P0085786 Olfr513 protein_coding protein_coding MGP_129S1SvImJ_T0015730.1 MGP_129S1SvImJ_G0013819.1 mouse_genomes_project 7 11816994 11821825 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008836.1 MGP_129S1SvImJ_G0007140.1 mouse_genomes_project 7 33489490 33493181 - Gm12762 lincRNA lincRNA MGP_129S1SvImJ_T0005231.1 MGP_129S1SvImJ_G0004451.1 mouse_genomes_project 7 44524572 44525297 + Gm44780 antisense antisense MGP_129S1SvImJ_T0018382.1 MGP_129S1SvImJ_G0015665.1 mouse_genomes_project 7 45210222 45216229 + Gm15545 processed_transcript processed_transcript MGP_129S1SvImJ_T0018383.1 MGP_129S1SvImJ_G0015665.1 mouse_genomes_project 7 45210249 45219047 + Gm15545 processed_transcript processed_transcript MGP_129S1SvImJ_T0018384.1 MGP_129S1SvImJ_G0015665.1 mouse_genomes_project 7 45210256 45215418 + Gm15545 processed_transcript processed_transcript MGP_129S1SvImJ_T0018385.1 MGP_129S1SvImJ_G0015665.1 mouse_genomes_project 7 45210295 45216776 + Gm15545 processed_transcript processed_transcript MGP_129S1SvImJ_T0009058.1 MGP_129S1SvImJ_G0007290.1 mouse_genomes_project 7 138382219 138383596 - Gm28747 lincRNA lincRNA MGP_129S1SvImJ_T0100077.1 MGP_129S1SvImJ_G0038144.1 mouse_genomes_project 7 111488295 111488353 - Gm25424 snRNA snRNA MGP_129S1SvImJ_T0008950.1 MGP_129S1SvImJ_G0007223.1 mouse_genomes_project 7 81423845 81451656 + Gm35040 lincRNA lincRNA MGP_129S1SvImJ_T0082400.1 MGP_129S1SvImJ_G0031883.1 mouse_genomes_project 7 24484282 24736691 + MGP_129S1SvImJ_P0082400 protein_coding protein_coding MGP_129S1SvImJ_T0005329.1 MGP_129S1SvImJ_G0004521.1 mouse_genomes_project 7 146809530 146813212 - Gm16982 antisense antisense MGP_129S1SvImJ_T0011724.1 MGP_129S1SvImJ_G0009840.1 mouse_genomes_project 7 148578634 148578858 + Gm27539 misc_RNA misc_RNA MGP_129S1SvImJ_T0002293.1 MGP_129S1SvImJ_G0002204.1 mouse_genomes_project 7 80608668 80609745 - TEC TEC MGP_129S1SvImJ_T0102806.1 MGP_129S1SvImJ_G0040638.1 mouse_genomes_project 7 106802316 106943122 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0083026.1 MGP_129S1SvImJ_G0032039.1 mouse_genomes_project 7 29706494 29707092 + MGP_129S1SvImJ_P0083026 2200002J24Rik protein_coding protein_coding MGP_129S1SvImJ_T0102710.1 MGP_129S1SvImJ_G0040543.1 mouse_genomes_project 7 13441752 13447579 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0087248.1 MGP_129S1SvImJ_G0033128.1 mouse_genomes_project 7 139042994 139147617 - MGP_129S1SvImJ_P0087248 D7Ertd443e protein_coding protein_coding MGP_129S1SvImJ_T0087249.1 MGP_129S1SvImJ_G0033128.1 mouse_genomes_project 7 139043007 139117895 - MGP_129S1SvImJ_P0087249 D7Ertd443e protein_coding protein_coding MGP_129S1SvImJ_T0087250.1 MGP_129S1SvImJ_G0033128.1 mouse_genomes_project 7 139043345 139135298 - MGP_129S1SvImJ_P0087250 D7Ertd443e protein_coding protein_coding MGP_129S1SvImJ_T0087251.1 MGP_129S1SvImJ_G0033128.1 mouse_genomes_project 7 139043546 139045573 - D7Ertd443e protein_coding retained_intron MGP_129S1SvImJ_T0087252.1 MGP_129S1SvImJ_G0033128.1 mouse_genomes_project 7 139043546 139124825 - MGP_129S1SvImJ_P0087252 D7Ertd443e protein_coding protein_coding MGP_129S1SvImJ_T0087253.1 MGP_129S1SvImJ_G0033128.1 mouse_genomes_project 7 139125461 139159510 - MGP_129S1SvImJ_P0087253 D7Ertd443e protein_coding protein_coding MGP_129S1SvImJ_T0087254.1 MGP_129S1SvImJ_G0033128.1 mouse_genomes_project 7 139125582 139159504 - MGP_129S1SvImJ_P0087254 D7Ertd443e protein_coding protein_coding MGP_129S1SvImJ_T0087255.1 MGP_129S1SvImJ_G0033128.1 mouse_genomes_project 7 139131274 139172696 - D7Ertd443e protein_coding processed_transcript MGP_129S1SvImJ_T0081537.1 MGP_129S1SvImJ_G0031614.1 mouse_genomes_project 7 3801449 3827979 - MGP_129S1SvImJ_P0081537 Peg3 protein_coding protein_coding MGP_129S1SvImJ_T0081538.1 MGP_129S1SvImJ_G0031614.1 mouse_genomes_project 7 3806952 3827977 - MGP_129S1SvImJ_P0081538 Peg3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081539.1 MGP_129S1SvImJ_G0031614.1 mouse_genomes_project 7 3809253 3820773 - MGP_129S1SvImJ_P0081539 Peg3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081540.1 MGP_129S1SvImJ_G0031614.1 mouse_genomes_project 7 3819490 3827977 - Peg3 protein_coding retained_intron MGP_129S1SvImJ_T0085922.1 MGP_129S1SvImJ_G0032866.1 mouse_genomes_project 7 115564350 115666053 + MGP_129S1SvImJ_P0085922 Usp47 protein_coding protein_coding MGP_129S1SvImJ_T0085923.1 MGP_129S1SvImJ_G0032866.1 mouse_genomes_project 7 115564552 115666058 + MGP_129S1SvImJ_P0085923 Usp47 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0102819.1 MGP_129S1SvImJ_G0040651.1 mouse_genomes_project 7 109094881 109107499 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102705.1 MGP_129S1SvImJ_G0040538.1 mouse_genomes_project 7 12131447 12132377 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002298.1 MGP_129S1SvImJ_G0002209.1 mouse_genomes_project 7 81396798 81397836 + TEC TEC MGP_129S1SvImJ_T0005173.1 MGP_129S1SvImJ_G0004410.1 mouse_genomes_project 7 15894137 15996304 - antisense antisense MGP_129S1SvImJ_T0005174.1 MGP_129S1SvImJ_G0004410.1 mouse_genomes_project 7 15897493 15996348 - antisense antisense MGP_129S1SvImJ_T0009061.1 MGP_129S1SvImJ_G0007292.1 mouse_genomes_project 7 140030374 140034432 - 1700120G07Rik lincRNA lincRNA MGP_129S1SvImJ_T0009062.1 MGP_129S1SvImJ_G0007292.1 mouse_genomes_project 7 140031511 140034432 - 1700120G07Rik lincRNA lincRNA MGP_129S1SvImJ_T0085309.1 MGP_129S1SvImJ_G0032585.1 mouse_genomes_project 7 104395499 104491369 + MGP_129S1SvImJ_P0085309 protein_coding protein_coding MGP_129S1SvImJ_T0085310.1 MGP_129S1SvImJ_G0032585.1 mouse_genomes_project 7 104395499 104491369 + MGP_129S1SvImJ_P0085310 protein_coding protein_coding MGP_129S1SvImJ_T0085311.1 MGP_129S1SvImJ_G0032585.1 mouse_genomes_project 7 104395517 104491354 + MGP_129S1SvImJ_P0085311 protein_coding protein_coding MGP_129S1SvImJ_T0085460.1 MGP_129S1SvImJ_G0032632.1 mouse_genomes_project 7 105993665 105994622 + MGP_129S1SvImJ_P0085460 Olfr572 protein_coding protein_coding MGP_129S1SvImJ_T0084008.1 MGP_129S1SvImJ_G0032274.1 mouse_genomes_project 7 47243886 47255403 + MGP_129S1SvImJ_P0084008 Ldha protein_coding protein_coding MGP_129S1SvImJ_T0084009.1 MGP_129S1SvImJ_G0032274.1 mouse_genomes_project 7 47248250 47259027 + MGP_129S1SvImJ_P0084009 Ldha protein_coding protein_coding MGP_129S1SvImJ_T0084010.1 MGP_129S1SvImJ_G0032274.1 mouse_genomes_project 7 47248274 47255412 + MGP_129S1SvImJ_P0084010 Ldha protein_coding protein_coding MGP_129S1SvImJ_T0084011.1 MGP_129S1SvImJ_G0032274.1 mouse_genomes_project 7 47249542 47259026 + MGP_129S1SvImJ_P0084011 Ldha protein_coding protein_coding MGP_129S1SvImJ_T0008969.1 MGP_129S1SvImJ_G0007232.1 mouse_genomes_project 7 90654423 90660570 - Gm26522 lincRNA lincRNA MGP_129S1SvImJ_T0086667.1 MGP_129S1SvImJ_G0033011.1 mouse_genomes_project 7 131288114 131292178 + MGP_129S1SvImJ_P0086667 Cdipt protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086668.1 MGP_129S1SvImJ_G0033011.1 mouse_genomes_project 7 131288136 131292180 + MGP_129S1SvImJ_P0086668 Cdipt protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086669.1 MGP_129S1SvImJ_G0033011.1 mouse_genomes_project 7 131288266 131291330 + MGP_129S1SvImJ_P0086669 Cdipt protein_coding protein_coding MGP_129S1SvImJ_T0086670.1 MGP_129S1SvImJ_G0033011.1 mouse_genomes_project 7 131288408 131291716 + MGP_129S1SvImJ_P0086670 Cdipt protein_coding protein_coding MGP_129S1SvImJ_T0086671.1 MGP_129S1SvImJ_G0033011.1 mouse_genomes_project 7 131288442 131292184 + MGP_129S1SvImJ_P0086671 Cdipt protein_coding protein_coding MGP_129S1SvImJ_T0086672.1 MGP_129S1SvImJ_G0033011.1 mouse_genomes_project 7 131289911 131291154 + Cdipt protein_coding retained_intron MGP_129S1SvImJ_T0005336.1 MGP_129S1SvImJ_G0004525.1 mouse_genomes_project 7 148501127 148581252 - Kcnq1ot1 antisense antisense MGP_129S1SvImJ_T0015702.1 MGP_129S1SvImJ_G0013791.1 mouse_genomes_project 7 1277206 1277384 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009010.1 MGP_129S1SvImJ_G0007258.1 mouse_genomes_project 7 121002199 121054974 + Gm45152 lincRNA lincRNA MGP_129S1SvImJ_T0102746.1 MGP_129S1SvImJ_G0040578.1 mouse_genomes_project 7 44141413 44144455 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102729.1 MGP_129S1SvImJ_G0040561.1 mouse_genomes_project 7 33104161 33104999 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085833.1 MGP_129S1SvImJ_G0032848.1 mouse_genomes_project 7 113202636 113228307 - MGP_129S1SvImJ_P0085833 Nrip3 protein_coding protein_coding MGP_129S1SvImJ_T0085834.1 MGP_129S1SvImJ_G0032848.1 mouse_genomes_project 7 113202640 113227827 - MGP_129S1SvImJ_P0085834 Nrip3 protein_coding protein_coding MGP_129S1SvImJ_T0084981.1 MGP_129S1SvImJ_G0032514.1 mouse_genomes_project 7 95304728 95395991 + MGP_129S1SvImJ_P0084981 Rab30 protein_coding protein_coding MGP_129S1SvImJ_T0084982.1 MGP_129S1SvImJ_G0032514.1 mouse_genomes_project 7 95378656 95395521 + MGP_129S1SvImJ_P0084982 Rab30 protein_coding protein_coding MGP_129S1SvImJ_T0084983.1 MGP_129S1SvImJ_G0032514.1 mouse_genomes_project 7 95378671 95395518 + MGP_129S1SvImJ_P0084983 Rab30 protein_coding protein_coding MGP_129S1SvImJ_T0008900.1 MGP_129S1SvImJ_G0007189.1 mouse_genomes_project 7 69575130 69584811 - Gm16157 lincRNA lincRNA MGP_129S1SvImJ_T0008901.1 MGP_129S1SvImJ_G0007189.1 mouse_genomes_project 7 69575743 69587852 - Gm16157 lincRNA lincRNA MGP_129S1SvImJ_T0087904.1 MGP_129S1SvImJ_G0033289.1 mouse_genomes_project 7 149940604 149947458 - MGP_129S1SvImJ_P0087904 Fadd protein_coding protein_coding MGP_129S1SvImJ_T0086277.1 MGP_129S1SvImJ_G0032950.1 mouse_genomes_project 7 126152176 126158446 - Ndufab1 protein_coding retained_intron MGP_129S1SvImJ_T0086278.1 MGP_129S1SvImJ_G0032950.1 mouse_genomes_project 7 126157476 126159751 - Ndufab1 protein_coding retained_intron MGP_129S1SvImJ_T0086279.1 MGP_129S1SvImJ_G0032950.1 mouse_genomes_project 7 126157482 126168964 - MGP_129S1SvImJ_P0086279 Ndufab1 protein_coding protein_coding MGP_129S1SvImJ_T0086280.1 MGP_129S1SvImJ_G0032950.1 mouse_genomes_project 7 126157491 126160426 - Ndufab1 protein_coding retained_intron MGP_129S1SvImJ_T0086281.1 MGP_129S1SvImJ_G0032950.1 mouse_genomes_project 7 126158184 126168836 - MGP_129S1SvImJ_P0086281 Ndufab1 protein_coding protein_coding MGP_129S1SvImJ_T0086282.1 MGP_129S1SvImJ_G0032950.1 mouse_genomes_project 7 126159783 126168807 - Ndufab1 protein_coding retained_intron MGP_129S1SvImJ_T0086283.1 MGP_129S1SvImJ_G0032950.1 mouse_genomes_project 7 126160675 126167844 - Ndufab1 protein_coding processed_transcript MGP_129S1SvImJ_T0086284.1 MGP_129S1SvImJ_G0032950.1 mouse_genomes_project 7 126163105 126168929 - Ndufab1 protein_coding retained_intron MGP_129S1SvImJ_T0082560.1 MGP_129S1SvImJ_G0031923.1 mouse_genomes_project 7 26506581 26531134 + MGP_129S1SvImJ_P0082560 Zfp626 protein_coding protein_coding MGP_129S1SvImJ_T0082561.1 MGP_129S1SvImJ_G0031923.1 mouse_genomes_project 7 26506643 26525748 + MGP_129S1SvImJ_P0082561 Zfp626 protein_coding protein_coding MGP_129S1SvImJ_T0010942.1 MGP_129S1SvImJ_G0009058.1 mouse_genomes_project 7 131839774 131839911 + Mir7060 miRNA miRNA MGP_129S1SvImJ_T0081552.1 MGP_129S1SvImJ_G0031623.1 mouse_genomes_project 7 7743891 7752057 - MGP_129S1SvImJ_P0081552 Zik1 protein_coding protein_coding MGP_129S1SvImJ_T0085028.1 MGP_129S1SvImJ_G0032526.1 mouse_genomes_project 7 100182574 100246341 + MGP_129S1SvImJ_P0085028 Ints4 protein_coding protein_coding MGP_129S1SvImJ_T0085029.1 MGP_129S1SvImJ_G0032526.1 mouse_genomes_project 7 100182621 100218266 + Ints4 protein_coding retained_intron MGP_129S1SvImJ_T0085030.1 MGP_129S1SvImJ_G0032526.1 mouse_genomes_project 7 100182631 100199871 + Ints4 protein_coding retained_intron MGP_129S1SvImJ_T0085031.1 MGP_129S1SvImJ_G0032526.1 mouse_genomes_project 7 100206381 100211898 + MGP_129S1SvImJ_P0085031 Ints4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085032.1 MGP_129S1SvImJ_G0032526.1 mouse_genomes_project 7 100234102 100240195 + Ints4 protein_coding retained_intron MGP_129S1SvImJ_T0085033.1 MGP_129S1SvImJ_G0032526.1 mouse_genomes_project 7 100240029 100246209 + Ints4 protein_coding retained_intron MGP_129S1SvImJ_T0085034.1 MGP_129S1SvImJ_G0032526.1 mouse_genomes_project 7 100240261 100246342 + Ints4 protein_coding retained_intron MGP_129S1SvImJ_T0008991.1 MGP_129S1SvImJ_G0007249.1 mouse_genomes_project 7 113459417 113467612 - lincRNA lincRNA MGP_129S1SvImJ_T0008992.1 MGP_129S1SvImJ_G0007249.1 mouse_genomes_project 7 113459445 113460275 - lincRNA lincRNA MGP_129S1SvImJ_T0008993.1 MGP_129S1SvImJ_G0007249.1 mouse_genomes_project 7 113459453 113617205 - lincRNA lincRNA MGP_129S1SvImJ_T0008994.1 MGP_129S1SvImJ_G0007249.1 mouse_genomes_project 7 113462105 113467597 - lincRNA lincRNA MGP_129S1SvImJ_T0087905.1 MGP_129S1SvImJ_G0033290.1 mouse_genomes_project 7 149955150 150114688 - MGP_129S1SvImJ_P0087905 Ano1 protein_coding protein_coding MGP_129S1SvImJ_T0087906.1 MGP_129S1SvImJ_G0033290.1 mouse_genomes_project 7 149955150 150114665 - MGP_129S1SvImJ_P0087906 Ano1 protein_coding protein_coding MGP_129S1SvImJ_T0087907.1 MGP_129S1SvImJ_G0033290.1 mouse_genomes_project 7 149955154 150114714 - MGP_129S1SvImJ_P0087907 Ano1 protein_coding protein_coding MGP_129S1SvImJ_T0087908.1 MGP_129S1SvImJ_G0033290.1 mouse_genomes_project 7 149962046 149976020 - Ano1 protein_coding retained_intron MGP_129S1SvImJ_T0087909.1 MGP_129S1SvImJ_G0033290.1 mouse_genomes_project 7 149989340 150042741 - MGP_129S1SvImJ_P0087909 Ano1 protein_coding protein_coding MGP_129S1SvImJ_T0087910.1 MGP_129S1SvImJ_G0033290.1 mouse_genomes_project 7 150019741 150128080 - MGP_129S1SvImJ_P0087910 Ano1 protein_coding protein_coding MGP_129S1SvImJ_T0087911.1 MGP_129S1SvImJ_G0033290.1 mouse_genomes_project 7 150023333 150042738 - Ano1 protein_coding retained_intron MGP_129S1SvImJ_T0087912.1 MGP_129S1SvImJ_G0033290.1 mouse_genomes_project 7 150024839 150052213 - MGP_129S1SvImJ_P0087912 Ano1 protein_coding protein_coding MGP_129S1SvImJ_T0100045.1 MGP_129S1SvImJ_G0038112.1 mouse_genomes_project 7 16661722 16661829 - Gm24464 snRNA snRNA MGP_129S1SvImJ_T0102766.1 MGP_129S1SvImJ_G0040598.1 mouse_genomes_project 7 49206495 49207387 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0084188.1 MGP_129S1SvImJ_G0032323.1 mouse_genomes_project 7 60773322 60803224 - MGP_129S1SvImJ_P0084188 Snurf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084189.1 MGP_129S1SvImJ_G0032323.1 mouse_genomes_project 7 60773322 60803224 - MGP_129S1SvImJ_P0084189 Snurf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084190.1 MGP_129S1SvImJ_G0032323.1 mouse_genomes_project 7 60775588 60779560 - Snurf protein_coding processed_transcript MGP_129S1SvImJ_T0084191.1 MGP_129S1SvImJ_G0032323.1 mouse_genomes_project 7 60779393 60779816 - Snurf protein_coding processed_transcript MGP_129S1SvImJ_T0086475.1 MGP_129S1SvImJ_G0032984.1 mouse_genomes_project 7 130770105 130781834 - MGP_129S1SvImJ_P0086475 Atxn2l protein_coding protein_coding MGP_129S1SvImJ_T0086476.1 MGP_129S1SvImJ_G0032984.1 mouse_genomes_project 7 130770112 130780811 - MGP_129S1SvImJ_P0086476 Atxn2l protein_coding protein_coding MGP_129S1SvImJ_T0086477.1 MGP_129S1SvImJ_G0032984.1 mouse_genomes_project 7 130770183 130781752 - MGP_129S1SvImJ_P0086477 Atxn2l protein_coding protein_coding MGP_129S1SvImJ_T0086478.1 MGP_129S1SvImJ_G0032984.1 mouse_genomes_project 7 130770549 130771773 - MGP_129S1SvImJ_P0086478 Atxn2l protein_coding protein_coding MGP_129S1SvImJ_T0086479.1 MGP_129S1SvImJ_G0032984.1 mouse_genomes_project 7 130771359 130780715 - MGP_129S1SvImJ_P0086479 Atxn2l protein_coding protein_coding MGP_129S1SvImJ_T0086480.1 MGP_129S1SvImJ_G0032984.1 mouse_genomes_project 7 130777546 130780497 - MGP_129S1SvImJ_P0086480 Atxn2l protein_coding protein_coding MGP_129S1SvImJ_T0083125.1 MGP_129S1SvImJ_G0032058.1 mouse_genomes_project 7 30110454 30114370 - MGP_129S1SvImJ_P0083125 Fxyd1 protein_coding protein_coding MGP_129S1SvImJ_T0083126.1 MGP_129S1SvImJ_G0032058.1 mouse_genomes_project 7 30110454 30114185 - MGP_129S1SvImJ_P0083126 Fxyd1 protein_coding protein_coding MGP_129S1SvImJ_T0083127.1 MGP_129S1SvImJ_G0032058.1 mouse_genomes_project 7 30110456 30112309 - Fxyd1 protein_coding retained_intron MGP_129S1SvImJ_T0083128.1 MGP_129S1SvImJ_G0032058.1 mouse_genomes_project 7 30110456 30114443 - MGP_129S1SvImJ_P0083128 Fxyd1 protein_coding protein_coding MGP_129S1SvImJ_T0083129.1 MGP_129S1SvImJ_G0032058.1 mouse_genomes_project 7 30110456 30113576 - MGP_129S1SvImJ_P0083129 Fxyd1 protein_coding protein_coding MGP_129S1SvImJ_T0083130.1 MGP_129S1SvImJ_G0032058.1 mouse_genomes_project 7 30110457 30111899 - MGP_129S1SvImJ_P0083130 Fxyd1 protein_coding protein_coding MGP_129S1SvImJ_T0083131.1 MGP_129S1SvImJ_G0032058.1 mouse_genomes_project 7 30110457 30114432 - MGP_129S1SvImJ_P0083131 Fxyd1 protein_coding protein_coding MGP_129S1SvImJ_T0083132.1 MGP_129S1SvImJ_G0032058.1 mouse_genomes_project 7 30110458 30110970 - Fxyd1 protein_coding retained_intron MGP_129S1SvImJ_T0083133.1 MGP_129S1SvImJ_G0032058.1 mouse_genomes_project 7 30110458 30113583 - MGP_129S1SvImJ_P0083133 Fxyd1 protein_coding protein_coding MGP_129S1SvImJ_T0083134.1 MGP_129S1SvImJ_G0032058.1 mouse_genomes_project 7 30110458 30113564 - MGP_129S1SvImJ_P0083134 Fxyd1 protein_coding protein_coding MGP_129S1SvImJ_T0083135.1 MGP_129S1SvImJ_G0032058.1 mouse_genomes_project 7 30110459 30113594 - MGP_129S1SvImJ_P0083135 Fxyd1 protein_coding protein_coding MGP_129S1SvImJ_T0083136.1 MGP_129S1SvImJ_G0032058.1 mouse_genomes_project 7 30110484 30114358 - MGP_129S1SvImJ_P0083136 Fxyd1 protein_coding protein_coding MGP_129S1SvImJ_T0083137.1 MGP_129S1SvImJ_G0032058.1 mouse_genomes_project 7 30110504 30113595 - MGP_129S1SvImJ_P0083137 Fxyd1 protein_coding protein_coding MGP_129S1SvImJ_T0083138.1 MGP_129S1SvImJ_G0032058.1 mouse_genomes_project 7 30110711 30114484 - MGP_129S1SvImJ_P0083138 Fxyd1 protein_coding protein_coding MGP_129S1SvImJ_T0083139.1 MGP_129S1SvImJ_G0032058.1 mouse_genomes_project 7 30110904 30112821 - Fxyd1 protein_coding retained_intron MGP_129S1SvImJ_T0083140.1 MGP_129S1SvImJ_G0032058.1 mouse_genomes_project 7 30112265 30114399 - Fxyd1 protein_coding retained_intron MGP_129S1SvImJ_T0083141.1 MGP_129S1SvImJ_G0032058.1 mouse_genomes_project 7 30112538 30117335 - Fxyd1 protein_coding retained_intron MGP_129S1SvImJ_T0084949.1 MGP_129S1SvImJ_G0032507.1 mouse_genomes_project 7 92868072 92872704 + MGP_129S1SvImJ_P0084949 Crebzf protein_coding protein_coding MGP_129S1SvImJ_T0084950.1 MGP_129S1SvImJ_G0032507.1 mouse_genomes_project 7 92868124 92874317 + MGP_129S1SvImJ_P0084950 Crebzf protein_coding protein_coding MGP_129S1SvImJ_T0084951.1 MGP_129S1SvImJ_G0032507.1 mouse_genomes_project 7 92869013 92870047 + Crebzf protein_coding processed_transcript MGP_129S1SvImJ_T0084952.1 MGP_129S1SvImJ_G0032507.1 mouse_genomes_project 7 92869013 92869722 + MGP_129S1SvImJ_P0084952 Crebzf protein_coding protein_coding MGP_129S1SvImJ_T0087794.1 MGP_129S1SvImJ_G0033267.1 mouse_genomes_project 7 148286068 148300403 + MGP_129S1SvImJ_P0087794 Tspan32 protein_coding protein_coding MGP_129S1SvImJ_T0087795.1 MGP_129S1SvImJ_G0033267.1 mouse_genomes_project 7 148286082 148288506 + Tspan32 protein_coding retained_intron MGP_129S1SvImJ_T0087796.1 MGP_129S1SvImJ_G0033267.1 mouse_genomes_project 7 148286660 148300561 + MGP_129S1SvImJ_P0087796 Tspan32 protein_coding protein_coding MGP_129S1SvImJ_T0087797.1 MGP_129S1SvImJ_G0033267.1 mouse_genomes_project 7 148286685 148300400 + MGP_129S1SvImJ_P0087797 Tspan32 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087798.1 MGP_129S1SvImJ_G0033267.1 mouse_genomes_project 7 148286693 148300403 + MGP_129S1SvImJ_P0087798 Tspan32 protein_coding protein_coding MGP_129S1SvImJ_T0087799.1 MGP_129S1SvImJ_G0033267.1 mouse_genomes_project 7 148286707 148300403 + MGP_129S1SvImJ_P0087799 Tspan32 protein_coding protein_coding MGP_129S1SvImJ_T0087800.1 MGP_129S1SvImJ_G0033267.1 mouse_genomes_project 7 148286721 148300403 + MGP_129S1SvImJ_P0087800 Tspan32 protein_coding protein_coding MGP_129S1SvImJ_T0087801.1 MGP_129S1SvImJ_G0033267.1 mouse_genomes_project 7 148286721 148300403 + MGP_129S1SvImJ_P0087801 Tspan32 protein_coding protein_coding MGP_129S1SvImJ_T0087802.1 MGP_129S1SvImJ_G0033267.1 mouse_genomes_project 7 148286950 148298590 + MGP_129S1SvImJ_P0087802 Tspan32 protein_coding protein_coding MGP_129S1SvImJ_T0087803.1 MGP_129S1SvImJ_G0033267.1 mouse_genomes_project 7 148298325 148299820 + Tspan32 protein_coding retained_intron MGP_129S1SvImJ_T0008906.1 MGP_129S1SvImJ_G0007191.1 mouse_genomes_project 7 69651427 69665962 - Gm16158 lincRNA lincRNA MGP_129S1SvImJ_T0008907.1 MGP_129S1SvImJ_G0007191.1 mouse_genomes_project 7 69651427 69665943 - Gm16158 lincRNA lincRNA MGP_129S1SvImJ_T0008942.1 MGP_129S1SvImJ_G0007221.1 mouse_genomes_project 7 80688925 80691867 - Gm44730 lincRNA lincRNA MGP_129S1SvImJ_T0008867.1 MGP_129S1SvImJ_G0007164.1 mouse_genomes_project 7 40315632 40324157 + 4933402C06Rik lincRNA lincRNA MGP_129S1SvImJ_T0008868.1 MGP_129S1SvImJ_G0007164.1 mouse_genomes_project 7 40315632 40332995 + 4933402C06Rik lincRNA lincRNA MGP_129S1SvImJ_T0010868.1 MGP_129S1SvImJ_G0008984.1 mouse_genomes_project 7 24347340 24347436 - Gm24865 miRNA miRNA MGP_129S1SvImJ_T0100068.1 MGP_129S1SvImJ_G0038135.1 mouse_genomes_project 7 86349621 86349779 + Gm22177 snRNA snRNA MGP_129S1SvImJ_T0102721.1 MGP_129S1SvImJ_G0040553.1 mouse_genomes_project 7 29993020 29998373 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0086137.1 MGP_129S1SvImJ_G0032907.1 mouse_genomes_project 7 122859661 122882850 - MGP_129S1SvImJ_P0086137 Gprc5b protein_coding protein_coding MGP_129S1SvImJ_T0087691.1 MGP_129S1SvImJ_G0033248.1 mouse_genomes_project 7 147412419 147413591 + MGP_129S1SvImJ_P0087691 protein_coding protein_coding MGP_129S1SvImJ_T0084382.1 MGP_129S1SvImJ_G0032364.1 mouse_genomes_project 7 70075743 70087941 - MGP_129S1SvImJ_P0084382 Arrdc4 protein_coding protein_coding MGP_129S1SvImJ_T0084383.1 MGP_129S1SvImJ_G0032364.1 mouse_genomes_project 7 70080210 70083606 - Arrdc4 protein_coding retained_intron MGP_129S1SvImJ_T0084384.1 MGP_129S1SvImJ_G0032364.1 mouse_genomes_project 7 70080302 70087888 - MGP_129S1SvImJ_P0084384 Arrdc4 protein_coding protein_coding MGP_129S1SvImJ_T0084043.1 MGP_129S1SvImJ_G0032292.1 mouse_genomes_project 7 49171564 49178683 - MGP_129S1SvImJ_P0084043 Mrgprb2 protein_coding protein_coding MGP_129S1SvImJ_T0081561.1 MGP_129S1SvImJ_G0031628.1 mouse_genomes_project 7 8018285 8020322 - MGP_129S1SvImJ_P0081561 Vmn1r71 protein_coding protein_coding MGP_129S1SvImJ_T0010930.1 MGP_129S1SvImJ_G0009046.1 mouse_genomes_project 7 103805243 103805347 - Mir3102 miRNA miRNA MGP_129S1SvImJ_T0015788.1 MGP_129S1SvImJ_G0013877.1 mouse_genomes_project 7 41035194 41038521 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084817.1 MGP_129S1SvImJ_G0032448.1 mouse_genomes_project 7 85695072 85704886 - MGP_129S1SvImJ_P0084817 protein_coding protein_coding MGP_129S1SvImJ_T0081554.1 MGP_129S1SvImJ_G0031625.1 mouse_genomes_project 7 7842167 7843899 - MGP_129S1SvImJ_P0081554 Vmn1r69 protein_coding protein_coding MGP_129S1SvImJ_T0081555.1 MGP_129S1SvImJ_G0031625.1 mouse_genomes_project 7 7843100 7877547 - MGP_129S1SvImJ_P0081555 Vmn1r69 protein_coding protein_coding MGP_129S1SvImJ_T0081556.1 MGP_129S1SvImJ_G0031625.1 mouse_genomes_project 7 7843100 7877547 - MGP_129S1SvImJ_P0081556 Vmn1r69 protein_coding protein_coding MGP_129S1SvImJ_T0085228.1 MGP_129S1SvImJ_G0032573.1 mouse_genomes_project 7 103438536 103476772 - MGP_129S1SvImJ_P0085228 Mrpl48 protein_coding protein_coding MGP_129S1SvImJ_T0085229.1 MGP_129S1SvImJ_G0032573.1 mouse_genomes_project 7 103438541 103440406 - MGP_129S1SvImJ_P0085229 Mrpl48 protein_coding protein_coding MGP_129S1SvImJ_T0085230.1 MGP_129S1SvImJ_G0032573.1 mouse_genomes_project 7 103442016 103468350 - Mrpl48 protein_coding processed_transcript MGP_129S1SvImJ_T0085231.1 MGP_129S1SvImJ_G0032573.1 mouse_genomes_project 7 103443365 103485112 - Mrpl48 protein_coding processed_transcript MGP_129S1SvImJ_T0085232.1 MGP_129S1SvImJ_G0032573.1 mouse_genomes_project 7 103445340 103499919 - Mrpl48 protein_coding processed_transcript MGP_129S1SvImJ_T0085233.1 MGP_129S1SvImJ_G0032573.1 mouse_genomes_project 7 103452606 103476780 - Mrpl48 protein_coding processed_transcript MGP_129S1SvImJ_T0085234.1 MGP_129S1SvImJ_G0032573.1 mouse_genomes_project 7 103459018 103476745 - MGP_129S1SvImJ_P0085234 Mrpl48 protein_coding protein_coding MGP_129S1SvImJ_T0085235.1 MGP_129S1SvImJ_G0032573.1 mouse_genomes_project 7 103459033 103499616 - Mrpl48 protein_coding processed_transcript MGP_129S1SvImJ_T0015728.1 MGP_129S1SvImJ_G0013817.1 mouse_genomes_project 7 11691685 11692139 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002294.1 MGP_129S1SvImJ_G0002205.1 mouse_genomes_project 7 80763250 80764881 - TEC TEC MGP_129S1SvImJ_T0005232.1 MGP_129S1SvImJ_G0004452.1 mouse_genomes_project 7 44675595 44678147 + Gm44646 antisense antisense MGP_129S1SvImJ_T0084614.1 MGP_129S1SvImJ_G0032410.1 mouse_genomes_project 7 82263999 82286531 + MGP_129S1SvImJ_P0084614 Prc1 protein_coding protein_coding MGP_129S1SvImJ_T0084615.1 MGP_129S1SvImJ_G0032410.1 mouse_genomes_project 7 82264000 82286531 + MGP_129S1SvImJ_P0084615 Prc1 protein_coding protein_coding MGP_129S1SvImJ_T0084616.1 MGP_129S1SvImJ_G0032410.1 mouse_genomes_project 7 82264014 82283018 + Prc1 protein_coding retained_intron MGP_129S1SvImJ_T0084617.1 MGP_129S1SvImJ_G0032410.1 mouse_genomes_project 7 82264022 82285856 + MGP_129S1SvImJ_P0084617 Prc1 protein_coding protein_coding MGP_129S1SvImJ_T0084618.1 MGP_129S1SvImJ_G0032410.1 mouse_genomes_project 7 82264023 82274016 + Prc1 protein_coding retained_intron MGP_129S1SvImJ_T0084619.1 MGP_129S1SvImJ_G0032410.1 mouse_genomes_project 7 82264028 82286523 + MGP_129S1SvImJ_P0084619 Prc1 protein_coding protein_coding MGP_129S1SvImJ_T0084620.1 MGP_129S1SvImJ_G0032410.1 mouse_genomes_project 7 82264054 82286526 + MGP_129S1SvImJ_P0084620 Prc1 protein_coding protein_coding MGP_129S1SvImJ_T0084621.1 MGP_129S1SvImJ_G0032410.1 mouse_genomes_project 7 82264062 82274206 + Prc1 protein_coding retained_intron MGP_129S1SvImJ_T0084622.1 MGP_129S1SvImJ_G0032410.1 mouse_genomes_project 7 82273979 82275542 + Prc1 protein_coding retained_intron MGP_129S1SvImJ_T0084623.1 MGP_129S1SvImJ_G0032410.1 mouse_genomes_project 7 82274313 82281153 + MGP_129S1SvImJ_P0084623 Prc1 protein_coding protein_coding MGP_129S1SvImJ_T0084624.1 MGP_129S1SvImJ_G0032410.1 mouse_genomes_project 7 82279657 82286529 + MGP_129S1SvImJ_P0084624 Prc1 protein_coding protein_coding MGP_129S1SvImJ_T0084625.1 MGP_129S1SvImJ_G0032410.1 mouse_genomes_project 7 82281117 82283766 + MGP_129S1SvImJ_P0084625 Prc1 protein_coding protein_coding MGP_129S1SvImJ_T0084626.1 MGP_129S1SvImJ_G0032410.1 mouse_genomes_project 7 82281373 82285789 + MGP_129S1SvImJ_P0084626 Prc1 protein_coding protein_coding MGP_129S1SvImJ_T0084627.1 MGP_129S1SvImJ_G0032410.1 mouse_genomes_project 7 82282579 82283969 + MGP_129S1SvImJ_P0084627 Prc1 protein_coding protein_coding MGP_129S1SvImJ_T0081877.1 MGP_129S1SvImJ_G0031743.1 mouse_genomes_project 7 16623796 16637853 + MGP_129S1SvImJ_P0081877 protein_coding protein_coding MGP_129S1SvImJ_T0081443.1 MGP_129S1SvImJ_G0031566.1 mouse_genomes_project 7 1795294 1816582 - MGP_129S1SvImJ_P0081443 Isoc2b protein_coding protein_coding MGP_129S1SvImJ_T0081699.1 MGP_129S1SvImJ_G0031687.1 mouse_genomes_project 7 12995236 13005776 + MGP_129S1SvImJ_P0081699 Obox5 protein_coding protein_coding MGP_129S1SvImJ_T0081700.1 MGP_129S1SvImJ_G0031687.1 mouse_genomes_project 7 12995482 13006920 + MGP_129S1SvImJ_P0081700 Obox5 protein_coding protein_coding MGP_129S1SvImJ_T0081701.1 MGP_129S1SvImJ_G0031687.1 mouse_genomes_project 7 12995486 13005781 + MGP_129S1SvImJ_P0081701 Obox5 protein_coding protein_coding MGP_129S1SvImJ_T0081887.1 MGP_129S1SvImJ_G0031747.1 mouse_genomes_project 7 16818134 16818646 - Ccdc61 protein_coding retained_intron MGP_129S1SvImJ_T0081888.1 MGP_129S1SvImJ_G0031747.1 mouse_genomes_project 7 16818134 16842883 - MGP_129S1SvImJ_P0081888 Ccdc61 protein_coding protein_coding MGP_129S1SvImJ_T0081889.1 MGP_129S1SvImJ_G0031747.1 mouse_genomes_project 7 16818135 16819825 - MGP_129S1SvImJ_P0081889 Ccdc61 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081890.1 MGP_129S1SvImJ_G0031747.1 mouse_genomes_project 7 16818135 16842866 - MGP_129S1SvImJ_P0081890 Ccdc61 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081891.1 MGP_129S1SvImJ_G0031747.1 mouse_genomes_project 7 16818256 16821240 - MGP_129S1SvImJ_P0081891 Ccdc61 protein_coding protein_coding MGP_129S1SvImJ_T0081892.1 MGP_129S1SvImJ_G0031747.1 mouse_genomes_project 7 16818897 16819631 - Ccdc61 protein_coding retained_intron MGP_129S1SvImJ_T0081893.1 MGP_129S1SvImJ_G0031747.1 mouse_genomes_project 7 16826858 16842866 - MGP_129S1SvImJ_P0081893 Ccdc61 protein_coding protein_coding MGP_129S1SvImJ_T0081894.1 MGP_129S1SvImJ_G0031747.1 mouse_genomes_project 7 16828290 16842857 - MGP_129S1SvImJ_P0081894 Ccdc61 protein_coding protein_coding MGP_129S1SvImJ_T0081640.1 MGP_129S1SvImJ_G0031664.1 mouse_genomes_project 7 10443868 10446258 - Ube2m protein_coding processed_transcript MGP_129S1SvImJ_T0081641.1 MGP_129S1SvImJ_G0031664.1 mouse_genomes_project 7 10443938 10446238 - MGP_129S1SvImJ_P0081641 Ube2m protein_coding protein_coding MGP_129S1SvImJ_T0081642.1 MGP_129S1SvImJ_G0031664.1 mouse_genomes_project 7 10444198 10445259 - MGP_129S1SvImJ_P0081642 Ube2m protein_coding protein_coding MGP_129S1SvImJ_T0081643.1 MGP_129S1SvImJ_G0031664.1 mouse_genomes_project 7 10444224 10446340 - MGP_129S1SvImJ_P0081643 Ube2m protein_coding protein_coding MGP_129S1SvImJ_T0081644.1 MGP_129S1SvImJ_G0031664.1 mouse_genomes_project 7 10444586 10446357 - Ube2m protein_coding retained_intron MGP_129S1SvImJ_T0081645.1 MGP_129S1SvImJ_G0031664.1 mouse_genomes_project 7 10445052 10446882 - MGP_129S1SvImJ_P0081645 Ube2m protein_coding protein_coding MGP_129S1SvImJ_T0081646.1 MGP_129S1SvImJ_G0031664.1 mouse_genomes_project 7 10445176 10446132 - Ube2m protein_coding processed_transcript MGP_129S1SvImJ_T0082195.1 MGP_129S1SvImJ_G0031835.1 mouse_genomes_project 7 22909160 22912748 - MGP_129S1SvImJ_P0082195 Zfp575 protein_coding protein_coding MGP_129S1SvImJ_T0002336.1 MGP_129S1SvImJ_G0002247.1 mouse_genomes_project 7 132186696 132188050 - TEC TEC MGP_129S1SvImJ_T0084167.1 MGP_129S1SvImJ_G0032319.1 mouse_genomes_project 7 58226118 58333835 - MGP_129S1SvImJ_P0084167 Gabra5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0085088.1 MGP_129S1SvImJ_G0032537.1 mouse_genomes_project 7 100943660 101027699 - MGP_129S1SvImJ_P0085088 Acer3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085089.1 MGP_129S1SvImJ_G0032537.1 mouse_genomes_project 7 100944054 101027621 - MGP_129S1SvImJ_P0085089 Acer3 protein_coding protein_coding MGP_129S1SvImJ_T0085090.1 MGP_129S1SvImJ_G0032537.1 mouse_genomes_project 7 100950165 100954108 - Acer3 protein_coding retained_intron MGP_129S1SvImJ_T0085091.1 MGP_129S1SvImJ_G0032537.1 mouse_genomes_project 7 100975569 101027677 - MGP_129S1SvImJ_P0085091 Acer3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081528.1 MGP_129S1SvImJ_G0031607.1 mouse_genomes_project 7 3569502 3570566 + MGP_129S1SvImJ_P0081528 Olfr1346 protein_coding protein_coding MGP_129S1SvImJ_T0087258.1 MGP_129S1SvImJ_G0033131.1 mouse_genomes_project 7 140110791 140115095 + MGP_129S1SvImJ_P0087258 Nps protein_coding protein_coding MGP_129S1SvImJ_T0102786.1 MGP_129S1SvImJ_G0040618.1 mouse_genomes_project 7 88062661 88062969 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0086639.1 MGP_129S1SvImJ_G0033006.1 mouse_genomes_project 7 131172078 131190997 - MGP_129S1SvImJ_P0086639 Taok2 protein_coding protein_coding MGP_129S1SvImJ_T0086640.1 MGP_129S1SvImJ_G0033006.1 mouse_genomes_project 7 131172792 131175294 - MGP_129S1SvImJ_P0086640 Taok2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0086641.1 MGP_129S1SvImJ_G0033006.1 mouse_genomes_project 7 131172902 131173652 - Taok2 protein_coding retained_intron MGP_129S1SvImJ_T0086642.1 MGP_129S1SvImJ_G0033006.1 mouse_genomes_project 7 131175898 131190997 - MGP_129S1SvImJ_P0086642 Taok2 protein_coding protein_coding MGP_129S1SvImJ_T0086643.1 MGP_129S1SvImJ_G0033006.1 mouse_genomes_project 7 131186192 131189253 - Taok2 protein_coding retained_intron MGP_129S1SvImJ_T0083924.1 MGP_129S1SvImJ_G0032253.1 mouse_genomes_project 7 46211166 46222621 - Syngr4 protein_coding processed_transcript MGP_129S1SvImJ_T0083925.1 MGP_129S1SvImJ_G0032253.1 mouse_genomes_project 7 46212824 46221692 - MGP_129S1SvImJ_P0083925 Syngr4 protein_coding protein_coding MGP_129S1SvImJ_T0085571.1 MGP_129S1SvImJ_G0032715.1 mouse_genomes_project 7 107535621 107552748 - MGP_129S1SvImJ_P0085571 Trim30c protein_coding protein_coding MGP_129S1SvImJ_T0010842.1 MGP_129S1SvImJ_G0008958.1 mouse_genomes_project 7 95309 95391 + Mir291a miRNA miRNA MGP_129S1SvImJ_T0008929.1 MGP_129S1SvImJ_G0007211.1 mouse_genomes_project 7 75248227 75248784 - lincRNA lincRNA MGP_129S1SvImJ_T0085759.1 MGP_129S1SvImJ_G0032802.1 mouse_genomes_project 7 111264308 111265391 + MGP_129S1SvImJ_P0085759 Olfr472 protein_coding protein_coding MGP_129S1SvImJ_T0085585.1 MGP_129S1SvImJ_G0032724.1 mouse_genomes_project 7 107767100 107768031 + MGP_129S1SvImJ_P0085585 Olfr657 protein_coding protein_coding MGP_129S1SvImJ_T0005333.1 MGP_129S1SvImJ_G0004523.1 mouse_genomes_project 7 148269981 148271790 - Tspan32os antisense antisense MGP_129S1SvImJ_T0005334.1 MGP_129S1SvImJ_G0004523.1 mouse_genomes_project 7 148269981 148289051 - Tspan32os antisense antisense MGP_129S1SvImJ_T0083945.1 MGP_129S1SvImJ_G0032258.1 mouse_genomes_project 7 46373525 46429153 + MGP_129S1SvImJ_P0083945 Nomo1 protein_coding protein_coding MGP_129S1SvImJ_T0083946.1 MGP_129S1SvImJ_G0032258.1 mouse_genomes_project 7 46393285 46394058 + Nomo1 protein_coding retained_intron MGP_129S1SvImJ_T0083947.1 MGP_129S1SvImJ_G0032258.1 mouse_genomes_project 7 46396716 46399747 + Nomo1 protein_coding retained_intron MGP_129S1SvImJ_T0083948.1 MGP_129S1SvImJ_G0032258.1 mouse_genomes_project 7 46401022 46403627 + Nomo1 protein_coding retained_intron MGP_129S1SvImJ_T0083949.1 MGP_129S1SvImJ_G0032258.1 mouse_genomes_project 7 46427584 46428744 + Nomo1 protein_coding retained_intron MGP_129S1SvImJ_T0084576.1 MGP_129S1SvImJ_G0032401.1 mouse_genomes_project 7 81959268 82029361 + MGP_129S1SvImJ_P0084576 Zfp710 protein_coding protein_coding MGP_129S1SvImJ_T0084577.1 MGP_129S1SvImJ_G0032401.1 mouse_genomes_project 7 81963242 82022341 + MGP_129S1SvImJ_P0084577 Zfp710 protein_coding protein_coding MGP_129S1SvImJ_T0084578.1 MGP_129S1SvImJ_G0032401.1 mouse_genomes_project 7 82022248 82033033 + MGP_129S1SvImJ_P0084578 Zfp710 protein_coding protein_coding MGP_129S1SvImJ_T0015865.1 MGP_129S1SvImJ_G0013954.1 mouse_genomes_project 7 89196707 89197640 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0087122.1 MGP_129S1SvImJ_G0033099.1 mouse_genomes_project 7 135927073 135944578 - MGP_129S1SvImJ_P0087122 Cuzd1 protein_coding protein_coding MGP_129S1SvImJ_T0085769.1 MGP_129S1SvImJ_G0032812.1 mouse_genomes_project 7 111496869 111497967 - MGP_129S1SvImJ_P0085769 protein_coding protein_coding MGP_129S1SvImJ_T0081550.1 MGP_129S1SvImJ_G0031621.1 mouse_genomes_project 7 7516742 7518266 - MGP_129S1SvImJ_P0081550 Vmn1r66 protein_coding protein_coding MGP_129S1SvImJ_T0082821.1 MGP_129S1SvImJ_G0031992.1 mouse_genomes_project 7 28845879 28854242 + MGP_129S1SvImJ_P0082821 Zfp383 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082822.1 MGP_129S1SvImJ_G0031992.1 mouse_genomes_project 7 28846173 28854236 + MGP_129S1SvImJ_P0082822 Zfp383 protein_coding protein_coding MGP_129S1SvImJ_T0081571.1 MGP_129S1SvImJ_G0031638.1 mouse_genomes_project 7 9414183 9416882 + MGP_129S1SvImJ_P0081571 Vmn1r77 protein_coding protein_coding MGP_129S1SvImJ_T0086765.1 MGP_129S1SvImJ_G0033036.1 mouse_genomes_project 7 131750487 131753525 - MGP_129S1SvImJ_P0086765 protein_coding protein_coding MGP_129S1SvImJ_T0002314.1 MGP_129S1SvImJ_G0002225.1 mouse_genomes_project 7 123397329 123399932 + TEC TEC MGP_129S1SvImJ_T0084032.1 MGP_129S1SvImJ_G0032285.1 mouse_genomes_project 7 47906685 47928155 - MGP_129S1SvImJ_P0084032 protein_coding protein_coding MGP_129S1SvImJ_T0084033.1 MGP_129S1SvImJ_G0032285.1 mouse_genomes_project 7 47906686 47960601 - MGP_129S1SvImJ_P0084033 protein_coding protein_coding MGP_129S1SvImJ_T0082013.1 MGP_129S1SvImJ_G0031781.1 mouse_genomes_project 7 17524461 17537032 + MGP_129S1SvImJ_P0082013 Trappc6a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082014.1 MGP_129S1SvImJ_G0031781.1 mouse_genomes_project 7 17524501 17537039 + MGP_129S1SvImJ_P0082014 Trappc6a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082015.1 MGP_129S1SvImJ_G0031781.1 mouse_genomes_project 7 17524503 17537039 + MGP_129S1SvImJ_P0082015 Trappc6a protein_coding protein_coding MGP_129S1SvImJ_T0082016.1 MGP_129S1SvImJ_G0031781.1 mouse_genomes_project 7 17524517 17537035 + MGP_129S1SvImJ_P0082016 Trappc6a protein_coding protein_coding MGP_129S1SvImJ_T0082017.1 MGP_129S1SvImJ_G0031781.1 mouse_genomes_project 7 17524521 17536212 + Trappc6a protein_coding retained_intron MGP_129S1SvImJ_T0082018.1 MGP_129S1SvImJ_G0031781.1 mouse_genomes_project 7 17535313 17537030 + MGP_129S1SvImJ_P0082018 Trappc6a protein_coding protein_coding MGP_129S1SvImJ_T0005221.1 MGP_129S1SvImJ_G0004446.1 mouse_genomes_project 7 35209960 35248305 + E130304I02Rik antisense antisense MGP_129S1SvImJ_T0005222.1 MGP_129S1SvImJ_G0004446.1 mouse_genomes_project 7 35209961 35210396 + E130304I02Rik antisense antisense MGP_129S1SvImJ_T0085848.1 MGP_129S1SvImJ_G0032851.1 mouse_genomes_project 7 113430821 113446294 - MGP_129S1SvImJ_P0085848 Tmem41b protein_coding protein_coding MGP_129S1SvImJ_T0085849.1 MGP_129S1SvImJ_G0032851.1 mouse_genomes_project 7 113434645 113439104 - Tmem41b protein_coding retained_intron MGP_129S1SvImJ_T0085850.1 MGP_129S1SvImJ_G0032851.1 mouse_genomes_project 7 113436767 113446374 - MGP_129S1SvImJ_P0085850 Tmem41b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085851.1 MGP_129S1SvImJ_G0032851.1 mouse_genomes_project 7 113436767 113446487 - MGP_129S1SvImJ_P0085851 Tmem41b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085852.1 MGP_129S1SvImJ_G0032851.1 mouse_genomes_project 7 113436834 113446461 - MGP_129S1SvImJ_P0085852 Tmem41b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085853.1 MGP_129S1SvImJ_G0032851.1 mouse_genomes_project 7 113440164 113446471 - Tmem41b protein_coding retained_intron MGP_129S1SvImJ_T0005326.1 MGP_129S1SvImJ_G0004518.1 mouse_genomes_project 7 137358051 137360558 - Gm15582 antisense antisense MGP_129S1SvImJ_T0082010.1 MGP_129S1SvImJ_G0031779.1 mouse_genomes_project 7 17473665 17512568 + MGP_129S1SvImJ_P0082010 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0082011.1 MGP_129S1SvImJ_G0031779.1 mouse_genomes_project 7 17502440 17512562 + MGP_129S1SvImJ_P0082011 protein_coding protein_coding MGP_129S1SvImJ_T0002292.1 MGP_129S1SvImJ_G0002203.1 mouse_genomes_project 7 80007803 80009292 - TEC TEC MGP_129S1SvImJ_T0009045.1 MGP_129S1SvImJ_G0007280.1 mouse_genomes_project 7 133028759 133031202 - Gm45121 lincRNA lincRNA MGP_129S1SvImJ_T0102823.1 MGP_129S1SvImJ_G0040655.1 mouse_genomes_project 7 109094885 109862159 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0008943.1 MGP_129S1SvImJ_G0007222.1 mouse_genomes_project 7 81386517 81419109 + Mir9-3hg lincRNA lincRNA MGP_129S1SvImJ_T0008944.1 MGP_129S1SvImJ_G0007222.1 mouse_genomes_project 7 81386529 81419314 + Mir9-3hg lincRNA lincRNA MGP_129S1SvImJ_T0008945.1 MGP_129S1SvImJ_G0007222.1 mouse_genomes_project 7 81386608 81422208 + Mir9-3hg lincRNA lincRNA MGP_129S1SvImJ_T0008946.1 MGP_129S1SvImJ_G0007222.1 mouse_genomes_project 7 81386612 81419199 + Mir9-3hg lincRNA lincRNA MGP_129S1SvImJ_T0008947.1 MGP_129S1SvImJ_G0007222.1 mouse_genomes_project 7 81401672 81420397 + Mir9-3hg lincRNA lincRNA MGP_129S1SvImJ_T0008948.1 MGP_129S1SvImJ_G0007222.1 mouse_genomes_project 7 81401875 81419065 + Mir9-3hg lincRNA lincRNA MGP_129S1SvImJ_T0008949.1 MGP_129S1SvImJ_G0007222.1 mouse_genomes_project 7 81414285 81419850 + Mir9-3hg lincRNA lincRNA MGP_129S1SvImJ_T0009053.1 MGP_129S1SvImJ_G0007287.1 mouse_genomes_project 7 135317735 135319744 - Etos1 lincRNA lincRNA MGP_129S1SvImJ_T0084084.1 MGP_129S1SvImJ_G0032302.1 mouse_genomes_project 7 50668883 51243840 + MGP_129S1SvImJ_P0084084 Nell1 protein_coding protein_coding MGP_129S1SvImJ_T0084085.1 MGP_129S1SvImJ_G0032302.1 mouse_genomes_project 7 50668883 51582469 + MGP_129S1SvImJ_P0084085 Nell1 protein_coding protein_coding MGP_129S1SvImJ_T0084086.1 MGP_129S1SvImJ_G0032302.1 mouse_genomes_project 7 50669088 50965591 + Nell1 protein_coding retained_intron MGP_129S1SvImJ_T0084087.1 MGP_129S1SvImJ_G0032302.1 mouse_genomes_project 7 50669353 51580572 + MGP_129S1SvImJ_P0084087 Nell1 protein_coding protein_coding MGP_129S1SvImJ_T0084088.1 MGP_129S1SvImJ_G0032302.1 mouse_genomes_project 7 50788580 50916984 + Nell1 protein_coding processed_transcript MGP_129S1SvImJ_T0084396.1 MGP_129S1SvImJ_G0032369.1 mouse_genomes_project 7 74983373 75105217 - MGP_129S1SvImJ_P0084396 Chd2 protein_coding protein_coding MGP_129S1SvImJ_T0084397.1 MGP_129S1SvImJ_G0032369.1 mouse_genomes_project 7 74983429 75027050 - MGP_129S1SvImJ_P0084397 Chd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084398.1 MGP_129S1SvImJ_G0032369.1 mouse_genomes_project 7 74986723 75004856 - MGP_129S1SvImJ_P0084398 Chd2 protein_coding protein_coding MGP_129S1SvImJ_T0084399.1 MGP_129S1SvImJ_G0032369.1 mouse_genomes_project 7 75006866 75013215 - MGP_129S1SvImJ_P0084399 Chd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084400.1 MGP_129S1SvImJ_G0032369.1 mouse_genomes_project 7 75009435 75019361 - Chd2 protein_coding processed_transcript MGP_129S1SvImJ_T0084401.1 MGP_129S1SvImJ_G0032369.1 mouse_genomes_project 7 75033051 75039478 - Chd2 protein_coding processed_transcript MGP_129S1SvImJ_T0084402.1 MGP_129S1SvImJ_G0032369.1 mouse_genomes_project 7 75033057 75039480 - MGP_129S1SvImJ_P0084402 Chd2 protein_coding protein_coding MGP_129S1SvImJ_T0084403.1 MGP_129S1SvImJ_G0032369.1 mouse_genomes_project 7 75033058 75037304 - Chd2 protein_coding retained_intron MGP_129S1SvImJ_T0084404.1 MGP_129S1SvImJ_G0032369.1 mouse_genomes_project 7 75057150 75061561 - MGP_129S1SvImJ_P0084404 Chd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084405.1 MGP_129S1SvImJ_G0032369.1 mouse_genomes_project 7 75059085 75061480 - MGP_129S1SvImJ_P0084405 Chd2 protein_coding protein_coding MGP_129S1SvImJ_T0084406.1 MGP_129S1SvImJ_G0032369.1 mouse_genomes_project 7 75060423 75105216 - MGP_129S1SvImJ_P0084406 Chd2 protein_coding protein_coding MGP_129S1SvImJ_T0084407.1 MGP_129S1SvImJ_G0032369.1 mouse_genomes_project 7 75061381 75063006 - Chd2 protein_coding retained_intron MGP_129S1SvImJ_T0084408.1 MGP_129S1SvImJ_G0032369.1 mouse_genomes_project 7 75067300 75101092 - MGP_129S1SvImJ_P0084408 Chd2 protein_coding protein_coding MGP_129S1SvImJ_T0084409.1 MGP_129S1SvImJ_G0032369.1 mouse_genomes_project 7 75067330 75105207 - MGP_129S1SvImJ_P0084409 Chd2 protein_coding protein_coding MGP_129S1SvImJ_T0084410.1 MGP_129S1SvImJ_G0032369.1 mouse_genomes_project 7 75101560 75105301 - Chd2 protein_coding retained_intron MGP_129S1SvImJ_T0084411.1 MGP_129S1SvImJ_G0032369.1 mouse_genomes_project 7 75102824 75105217 - Chd2 protein_coding processed_transcript MGP_129S1SvImJ_T0084412.1 MGP_129S1SvImJ_G0032369.1 mouse_genomes_project 7 75103268 75104996 - Chd2 protein_coding processed_transcript MGP_129S1SvImJ_T0086203.1 MGP_129S1SvImJ_G0032929.1 mouse_genomes_project 7 124383815 124452608 + MGP_129S1SvImJ_P0086203 Abca16 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086204.1 MGP_129S1SvImJ_G0032929.1 mouse_genomes_project 7 124399848 124515548 + MGP_129S1SvImJ_P0086204 Abca16 protein_coding protein_coding MGP_129S1SvImJ_T0086205.1 MGP_129S1SvImJ_G0032929.1 mouse_genomes_project 7 124399848 124515548 + MGP_129S1SvImJ_P0086205 Abca16 protein_coding protein_coding MGP_129S1SvImJ_T0086206.1 MGP_129S1SvImJ_G0032929.1 mouse_genomes_project 7 124448330 124462705 + Abca16 protein_coding retained_intron MGP_129S1SvImJ_T0082104.1 MGP_129S1SvImJ_G0031814.1 mouse_genomes_project 7 22351641 22384613 + MGP_129S1SvImJ_P0082104 Zfp180 protein_coding protein_coding MGP_129S1SvImJ_T0082105.1 MGP_129S1SvImJ_G0031814.1 mouse_genomes_project 7 22351641 22384628 + MGP_129S1SvImJ_P0082105 Zfp180 protein_coding protein_coding MGP_129S1SvImJ_T0082106.1 MGP_129S1SvImJ_G0031814.1 mouse_genomes_project 7 22351664 22381481 + MGP_129S1SvImJ_P0082106 Zfp180 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082107.1 MGP_129S1SvImJ_G0031814.1 mouse_genomes_project 7 22351675 22384607 + MGP_129S1SvImJ_P0082107 Zfp180 protein_coding protein_coding MGP_129S1SvImJ_T0082108.1 MGP_129S1SvImJ_G0031814.1 mouse_genomes_project 7 22370045 22374514 + Zfp180 protein_coding retained_intron MGP_129S1SvImJ_T0081759.1 MGP_129S1SvImJ_G0031704.1 mouse_genomes_project 7 13916239 13930319 - MGP_129S1SvImJ_P0081759 C5ar1 protein_coding protein_coding MGP_129S1SvImJ_T0081760.1 MGP_129S1SvImJ_G0031704.1 mouse_genomes_project 7 13916241 13930117 - MGP_129S1SvImJ_P0081760 C5ar1 protein_coding protein_coding MGP_129S1SvImJ_T0015925.1 MGP_129S1SvImJ_G0014014.1 mouse_genomes_project 7 131758253 131758425 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011697.1 MGP_129S1SvImJ_G0009813.1 mouse_genomes_project 7 3941737 3942035 - Gm22649 misc_RNA misc_RNA MGP_129S1SvImJ_T0082921.1 MGP_129S1SvImJ_G0032017.1 mouse_genomes_project 7 29399747 29403516 + MGP_129S1SvImJ_P0082921 Tyrobp protein_coding protein_coding MGP_129S1SvImJ_T0018431.1 MGP_129S1SvImJ_G0015680.1 mouse_genomes_project 7 99599087 99637911 - C230038L03Rik processed_transcript antisense MGP_129S1SvImJ_T0018432.1 MGP_129S1SvImJ_G0015680.1 mouse_genomes_project 7 99610993 99641019 - C230038L03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018433.1 MGP_129S1SvImJ_G0015680.1 mouse_genomes_project 7 99638454 99642359 - C230038L03Rik processed_transcript antisense MGP_129S1SvImJ_T0018434.1 MGP_129S1SvImJ_G0015680.1 mouse_genomes_project 7 99638786 99642765 - C230038L03Rik processed_transcript antisense MGP_129S1SvImJ_T0085586.1 MGP_129S1SvImJ_G0032725.1 mouse_genomes_project 7 107775827 107780771 - MGP_129S1SvImJ_P0085586 protein_coding protein_coding MGP_129S1SvImJ_T0002334.1 MGP_129S1SvImJ_G0002245.1 mouse_genomes_project 7 132016491 132017664 - TEC TEC MGP_129S1SvImJ_T0102681.1 MGP_129S1SvImJ_G0040514.1 mouse_genomes_project 7 9365005 9365204 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0100046.1 MGP_129S1SvImJ_G0038113.1 mouse_genomes_project 7 17212693 17212853 + Gm25134 snRNA snRNA MGP_129S1SvImJ_T0015817.1 MGP_129S1SvImJ_G0013906.1 mouse_genomes_project 7 56265639 56266185 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008854.1 MGP_129S1SvImJ_G0007157.1 mouse_genomes_project 7 37585971 37597540 - Gm45106 lincRNA lincRNA MGP_129S1SvImJ_T0015741.1 MGP_129S1SvImJ_G0013830.1 mouse_genomes_project 7 16041566 16043073 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0087895.1 MGP_129S1SvImJ_G0033288.1 mouse_genomes_project 7 149836754 149915806 - MGP_129S1SvImJ_P0087895 Ppfia1 protein_coding protein_coding MGP_129S1SvImJ_T0087896.1 MGP_129S1SvImJ_G0033288.1 mouse_genomes_project 7 149836762 149875626 - MGP_129S1SvImJ_P0087896 Ppfia1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087897.1 MGP_129S1SvImJ_G0033288.1 mouse_genomes_project 7 149837672 149914610 - MGP_129S1SvImJ_P0087897 Ppfia1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0087898.1 MGP_129S1SvImJ_G0033288.1 mouse_genomes_project 7 149838141 149914614 - MGP_129S1SvImJ_P0087898 Ppfia1 protein_coding protein_coding MGP_129S1SvImJ_T0087899.1 MGP_129S1SvImJ_G0033288.1 mouse_genomes_project 7 149843590 149847955 - Ppfia1 protein_coding processed_transcript MGP_129S1SvImJ_T0087900.1 MGP_129S1SvImJ_G0033288.1 mouse_genomes_project 7 149860031 149863239 - Ppfia1 protein_coding retained_intron MGP_129S1SvImJ_T0087901.1 MGP_129S1SvImJ_G0033288.1 mouse_genomes_project 7 149868884 149871647 - Ppfia1 protein_coding retained_intron MGP_129S1SvImJ_T0087902.1 MGP_129S1SvImJ_G0033288.1 mouse_genomes_project 7 149881594 149914439 - MGP_129S1SvImJ_P0087902 Ppfia1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087903.1 MGP_129S1SvImJ_G0033288.1 mouse_genomes_project 7 149882619 149886694 - Ppfia1 protein_coding retained_intron MGP_129S1SvImJ_T0082704.1 MGP_129S1SvImJ_G0031965.1 mouse_genomes_project 7 27737455 27739299 + MGP_129S1SvImJ_P0082704 Lgals7 protein_coding protein_coding MGP_129S1SvImJ_T0082705.1 MGP_129S1SvImJ_G0031965.1 mouse_genomes_project 7 27737831 27739887 + MGP_129S1SvImJ_P0082705 Lgals7 protein_coding protein_coding MGP_129S1SvImJ_T0082706.1 MGP_129S1SvImJ_G0031965.1 mouse_genomes_project 7 27738057 27738591 + Lgals7 protein_coding processed_transcript MGP_129S1SvImJ_T0008999.1 MGP_129S1SvImJ_G0007253.1 mouse_genomes_project 7 118638725 118645101 - Gm45020 lincRNA lincRNA MGP_129S1SvImJ_T0005254.1 MGP_129S1SvImJ_G0004468.1 mouse_genomes_project 7 81646696 81647881 + Gm44706 antisense antisense MGP_129S1SvImJ_T0084763.1 MGP_129S1SvImJ_G0032430.1 mouse_genomes_project 7 83558333 83562343 - MGP_129S1SvImJ_P0084763 BC048679 protein_coding protein_coding MGP_129S1SvImJ_T0084764.1 MGP_129S1SvImJ_G0032430.1 mouse_genomes_project 7 83558333 83562343 - MGP_129S1SvImJ_P0084764 BC048679 protein_coding protein_coding MGP_129S1SvImJ_T0084885.1 MGP_129S1SvImJ_G0032486.1 mouse_genomes_project 7 89081216 89093163 + MGP_129S1SvImJ_P0084885 Vmn2r77 protein_coding protein_coding MGP_129S1SvImJ_T0101351.1 MGP_129S1SvImJ_G0039418.1 mouse_genomes_project 7 123201376 123201502 - Gm23321 snoRNA snoRNA MGP_129S1SvImJ_T0084773.1 MGP_129S1SvImJ_G0032436.1 mouse_genomes_project 7 83865916 83876897 - MGP_129S1SvImJ_P0084773 3110040N11Rik protein_coding protein_coding MGP_129S1SvImJ_T0084774.1 MGP_129S1SvImJ_G0032436.1 mouse_genomes_project 7 83869117 83876920 - 3110040N11Rik protein_coding processed_transcript MGP_129S1SvImJ_T0084775.1 MGP_129S1SvImJ_G0032436.1 mouse_genomes_project 7 83869117 83876115 - 3110040N11Rik protein_coding processed_transcript MGP_129S1SvImJ_T0084776.1 MGP_129S1SvImJ_G0032436.1 mouse_genomes_project 7 83869136 83876560 - 3110040N11Rik protein_coding processed_transcript MGP_129S1SvImJ_T0084777.1 MGP_129S1SvImJ_G0032436.1 mouse_genomes_project 7 83869190 83876916 - MGP_129S1SvImJ_P0084777 3110040N11Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085654.1 MGP_129S1SvImJ_G0032758.1 mouse_genomes_project 7 108897304 108903517 - MGP_129S1SvImJ_P0085654 Arfip2 protein_coding protein_coding MGP_129S1SvImJ_T0085655.1 MGP_129S1SvImJ_G0032758.1 mouse_genomes_project 7 108897308 108903015 - Arfip2 protein_coding retained_intron MGP_129S1SvImJ_T0085656.1 MGP_129S1SvImJ_G0032758.1 mouse_genomes_project 7 108898722 108903415 - MGP_129S1SvImJ_P0085656 Arfip2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085657.1 MGP_129S1SvImJ_G0032758.1 mouse_genomes_project 7 108898725 108901004 - Arfip2 protein_coding processed_transcript MGP_129S1SvImJ_T0085658.1 MGP_129S1SvImJ_G0032758.1 mouse_genomes_project 7 108898757 108903438 - MGP_129S1SvImJ_P0085658 Arfip2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085659.1 MGP_129S1SvImJ_G0032758.1 mouse_genomes_project 7 108898758 108903452 - MGP_129S1SvImJ_P0085659 Arfip2 protein_coding protein_coding MGP_129S1SvImJ_T0085660.1 MGP_129S1SvImJ_G0032758.1 mouse_genomes_project 7 108900003 108901147 - Arfip2 protein_coding processed_transcript MGP_129S1SvImJ_T0085661.1 MGP_129S1SvImJ_G0032758.1 mouse_genomes_project 7 108900221 108901017 - Arfip2 protein_coding processed_transcript MGP_129S1SvImJ_T0085662.1 MGP_129S1SvImJ_G0032758.1 mouse_genomes_project 7 108900289 108903409 - MGP_129S1SvImJ_P0085662 Arfip2 protein_coding protein_coding MGP_129S1SvImJ_T0085663.1 MGP_129S1SvImJ_G0032758.1 mouse_genomes_project 7 108900949 108903436 - MGP_129S1SvImJ_P0085663 Arfip2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085664.1 MGP_129S1SvImJ_G0032758.1 mouse_genomes_project 7 108901687 108903441 - Arfip2 protein_coding retained_intron MGP_129S1SvImJ_T0086010.1 MGP_129S1SvImJ_G0032887.1 mouse_genomes_project 7 119192786 119760925 - MGP_129S1SvImJ_P0086010 Sox6 protein_coding protein_coding MGP_129S1SvImJ_T0086011.1 MGP_129S1SvImJ_G0032887.1 mouse_genomes_project 7 119193258 119717743 - MGP_129S1SvImJ_P0086011 Sox6 protein_coding protein_coding MGP_129S1SvImJ_T0086012.1 MGP_129S1SvImJ_G0032887.1 mouse_genomes_project 7 119193258 119768497 - MGP_129S1SvImJ_P0086012 Sox6 protein_coding protein_coding MGP_129S1SvImJ_T0086013.1 MGP_129S1SvImJ_G0032887.1 mouse_genomes_project 7 119193258 119760925 - MGP_129S1SvImJ_P0086013 Sox6 protein_coding protein_coding MGP_129S1SvImJ_T0086014.1 MGP_129S1SvImJ_G0032887.1 mouse_genomes_project 7 119196368 119540366 - MGP_129S1SvImJ_P0086014 Sox6 protein_coding protein_coding MGP_129S1SvImJ_T0086015.1 MGP_129S1SvImJ_G0032887.1 mouse_genomes_project 7 119198571 119566717 - MGP_129S1SvImJ_P0086015 Sox6 protein_coding protein_coding MGP_129S1SvImJ_T0086016.1 MGP_129S1SvImJ_G0032887.1 mouse_genomes_project 7 119198571 119566752 - MGP_129S1SvImJ_P0086016 Sox6 protein_coding protein_coding MGP_129S1SvImJ_T0086017.1 MGP_129S1SvImJ_G0032887.1 mouse_genomes_project 7 119198584 119717743 - MGP_129S1SvImJ_P0086017 Sox6 protein_coding protein_coding MGP_129S1SvImJ_T0086018.1 MGP_129S1SvImJ_G0032887.1 mouse_genomes_project 7 119238587 119763378 - Sox6 protein_coding retained_intron MGP_129S1SvImJ_T0086019.1 MGP_129S1SvImJ_G0032887.1 mouse_genomes_project 7 119239021 119320125 - Sox6 protein_coding processed_transcript MGP_129S1SvImJ_T0086020.1 MGP_129S1SvImJ_G0032887.1 mouse_genomes_project 7 119265446 119768549 - Sox6 protein_coding retained_intron MGP_129S1SvImJ_T0086021.1 MGP_129S1SvImJ_G0032887.1 mouse_genomes_project 7 119309134 119386354 - MGP_129S1SvImJ_P0086021 Sox6 protein_coding protein_coding MGP_129S1SvImJ_T0086022.1 MGP_129S1SvImJ_G0032887.1 mouse_genomes_project 7 119319457 119386354 - Sox6 protein_coding retained_intron MGP_129S1SvImJ_T0086023.1 MGP_129S1SvImJ_G0032887.1 mouse_genomes_project 7 119498677 119580247 - MGP_129S1SvImJ_P0086023 Sox6 protein_coding protein_coding MGP_129S1SvImJ_T0086024.1 MGP_129S1SvImJ_G0032887.1 mouse_genomes_project 7 119523165 119764289 - Sox6 protein_coding processed_transcript MGP_129S1SvImJ_T0086025.1 MGP_129S1SvImJ_G0032887.1 mouse_genomes_project 7 119564784 119566763 - Sox6 protein_coding retained_intron MGP_129S1SvImJ_T0081630.1 MGP_129S1SvImJ_G0031662.1 mouse_genomes_project 7 10432794 10439683 + MGP_129S1SvImJ_P0081630 Trim28 protein_coding protein_coding MGP_129S1SvImJ_T0081631.1 MGP_129S1SvImJ_G0031662.1 mouse_genomes_project 7 10436263 10437772 + Trim28 protein_coding retained_intron MGP_129S1SvImJ_T0081632.1 MGP_129S1SvImJ_G0031662.1 mouse_genomes_project 7 10436475 10437150 + Trim28 protein_coding retained_intron MGP_129S1SvImJ_T0081633.1 MGP_129S1SvImJ_G0031662.1 mouse_genomes_project 7 10436667 10438247 + Trim28 protein_coding retained_intron MGP_129S1SvImJ_T0081634.1 MGP_129S1SvImJ_G0031662.1 mouse_genomes_project 7 10437052 10438013 + Trim28 protein_coding retained_intron MGP_129S1SvImJ_T0081635.1 MGP_129S1SvImJ_G0031662.1 mouse_genomes_project 7 10437527 10438574 + Trim28 protein_coding retained_intron MGP_129S1SvImJ_T0081636.1 MGP_129S1SvImJ_G0031662.1 mouse_genomes_project 7 10437738 10438643 + Trim28 protein_coding retained_intron MGP_129S1SvImJ_T0081637.1 MGP_129S1SvImJ_G0031662.1 mouse_genomes_project 7 10438351 10438995 + Trim28 protein_coding retained_intron MGP_129S1SvImJ_T0081638.1 MGP_129S1SvImJ_G0031662.1 mouse_genomes_project 7 10439019 10439680 + Trim28 protein_coding retained_intron MGP_129S1SvImJ_T0084647.1 MGP_129S1SvImJ_G0032412.1 mouse_genomes_project 7 82314431 82316659 + MGP_129S1SvImJ_P0084647 Hddc3 protein_coding protein_coding MGP_129S1SvImJ_T0084648.1 MGP_129S1SvImJ_G0032412.1 mouse_genomes_project 7 82314443 82315307 + MGP_129S1SvImJ_P0084648 Hddc3 protein_coding protein_coding MGP_129S1SvImJ_T0084649.1 MGP_129S1SvImJ_G0032412.1 mouse_genomes_project 7 82314893 82315709 + MGP_129S1SvImJ_P0084649 Hddc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084650.1 MGP_129S1SvImJ_G0032412.1 mouse_genomes_project 7 82315106 82320539 + MGP_129S1SvImJ_P0084650 Hddc3 protein_coding protein_coding MGP_129S1SvImJ_T0102825.1 MGP_129S1SvImJ_G0040657.1 mouse_genomes_project 7 109201956 109205549 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015754.1 MGP_129S1SvImJ_G0013843.1 mouse_genomes_project 7 23894050 23895002 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101771.1 MGP_129S1SvImJ_G0039751.1 mouse_genomes_project 7 132737995 132762199 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101772.1 MGP_129S1SvImJ_G0039751.1 mouse_genomes_project 7 132761860 132762055 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0081872.1 MGP_129S1SvImJ_G0031738.1 mouse_genomes_project 7 16056974 16082946 + MGP_129S1SvImJ_P0081872 Mill1 protein_coding protein_coding MGP_129S1SvImJ_T0005318.1 MGP_129S1SvImJ_G0004512.1 mouse_genomes_project 7 132585617 132587335 - Gm45108 antisense antisense MGP_129S1SvImJ_T0015713.1 MGP_129S1SvImJ_G0013802.1 mouse_genomes_project 7 3496740 3496950 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008875.1 MGP_129S1SvImJ_G0007169.1 mouse_genomes_project 7 43699030 43699504 - Gm44819 lincRNA lincRNA MGP_129S1SvImJ_T0015885.1 MGP_129S1SvImJ_G0013974.1 mouse_genomes_project 7 103064541 103065764 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018370.1 MGP_129S1SvImJ_G0015659.1 mouse_genomes_project 7 26358703 26361904 - Gm44684 processed_transcript processed_transcript MGP_129S1SvImJ_T0015739.1 MGP_129S1SvImJ_G0013828.1 mouse_genomes_project 7 15630931 15631423 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002289.1 MGP_129S1SvImJ_G0002200.1 mouse_genomes_project 7 78342231 78343182 + TEC TEC MGP_129S1SvImJ_T0086606.1 MGP_129S1SvImJ_G0033002.1 mouse_genomes_project 7 131132487 131133516 - MGP_129S1SvImJ_P0086606 4930451I11Rik protein_coding protein_coding MGP_129S1SvImJ_T0086607.1 MGP_129S1SvImJ_G0033002.1 mouse_genomes_project 7 131132488 131133659 - 4930451I11Rik protein_coding processed_transcript MGP_129S1SvImJ_T0086608.1 MGP_129S1SvImJ_G0033002.1 mouse_genomes_project 7 131132496 131133492 - MGP_129S1SvImJ_P0086608 4930451I11Rik protein_coding protein_coding MGP_129S1SvImJ_T0010894.1 MGP_129S1SvImJ_G0009010.1 mouse_genomes_project 7 54795517 54795625 - Gm27921 miRNA miRNA MGP_129S1SvImJ_T0084090.1 MGP_129S1SvImJ_G0032304.1 mouse_genomes_project 7 52242214 52346356 + MGP_129S1SvImJ_P0084090 Ano5 protein_coding protein_coding MGP_129S1SvImJ_T0084091.1 MGP_129S1SvImJ_G0032304.1 mouse_genomes_project 7 52242228 52341493 + MGP_129S1SvImJ_P0084091 Ano5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0083665.1 MGP_129S1SvImJ_G0032181.1 mouse_genomes_project 7 45057017 45063433 + MGP_129S1SvImJ_P0083665 Akt1s1 protein_coding protein_coding MGP_129S1SvImJ_T0083666.1 MGP_129S1SvImJ_G0032181.1 mouse_genomes_project 7 45057250 45063446 + MGP_129S1SvImJ_P0083666 Akt1s1 protein_coding protein_coding MGP_129S1SvImJ_T0083667.1 MGP_129S1SvImJ_G0032181.1 mouse_genomes_project 7 45057370 45063442 + Akt1s1 protein_coding retained_intron MGP_129S1SvImJ_T0083668.1 MGP_129S1SvImJ_G0032181.1 mouse_genomes_project 7 45057607 45060971 + MGP_129S1SvImJ_P0083668 Akt1s1 protein_coding protein_coding MGP_129S1SvImJ_T0083669.1 MGP_129S1SvImJ_G0032181.1 mouse_genomes_project 7 45057655 45062761 + MGP_129S1SvImJ_P0083669 Akt1s1 protein_coding protein_coding MGP_129S1SvImJ_T0083670.1 MGP_129S1SvImJ_G0032181.1 mouse_genomes_project 7 45058033 45062061 + MGP_129S1SvImJ_P0083670 Akt1s1 protein_coding protein_coding MGP_129S1SvImJ_T0083671.1 MGP_129S1SvImJ_G0032181.1 mouse_genomes_project 7 45058042 45063443 + MGP_129S1SvImJ_P0083671 Akt1s1 protein_coding protein_coding MGP_129S1SvImJ_T0083672.1 MGP_129S1SvImJ_G0032181.1 mouse_genomes_project 7 45058422 45060888 + MGP_129S1SvImJ_P0083672 Akt1s1 protein_coding protein_coding MGP_129S1SvImJ_T0083673.1 MGP_129S1SvImJ_G0032181.1 mouse_genomes_project 7 45059518 45060663 + MGP_129S1SvImJ_P0083673 Akt1s1 protein_coding protein_coding MGP_129S1SvImJ_T0083674.1 MGP_129S1SvImJ_G0032181.1 mouse_genomes_project 7 45060595 45062711 + MGP_129S1SvImJ_P0083674 Akt1s1 protein_coding protein_coding MGP_129S1SvImJ_T0083675.1 MGP_129S1SvImJ_G0032181.1 mouse_genomes_project 7 45060944 45062669 + Akt1s1 protein_coding retained_intron MGP_129S1SvImJ_T0086609.1 MGP_129S1SvImJ_G0033003.1 mouse_genomes_project 7 131153816 131155926 + MGP_129S1SvImJ_P0086609 Doc2a protein_coding protein_coding MGP_129S1SvImJ_T0086610.1 MGP_129S1SvImJ_G0033003.1 mouse_genomes_project 7 131153953 131159106 + MGP_129S1SvImJ_P0086610 Doc2a protein_coding protein_coding MGP_129S1SvImJ_T0086611.1 MGP_129S1SvImJ_G0033003.1 mouse_genomes_project 7 131154038 131155153 + Doc2a protein_coding processed_transcript MGP_129S1SvImJ_T0086612.1 MGP_129S1SvImJ_G0033003.1 mouse_genomes_project 7 131154098 131155093 + MGP_129S1SvImJ_P0086612 Doc2a protein_coding protein_coding MGP_129S1SvImJ_T0086613.1 MGP_129S1SvImJ_G0033003.1 mouse_genomes_project 7 131154126 131157740 + MGP_129S1SvImJ_P0086613 Doc2a protein_coding protein_coding MGP_129S1SvImJ_T0086614.1 MGP_129S1SvImJ_G0033003.1 mouse_genomes_project 7 131154327 131155237 + MGP_129S1SvImJ_P0086614 Doc2a protein_coding protein_coding MGP_129S1SvImJ_T0086615.1 MGP_129S1SvImJ_G0033003.1 mouse_genomes_project 7 131154362 131155236 + MGP_129S1SvImJ_P0086615 Doc2a protein_coding protein_coding MGP_129S1SvImJ_T0086616.1 MGP_129S1SvImJ_G0033003.1 mouse_genomes_project 7 131154655 131156161 + MGP_129S1SvImJ_P0086616 Doc2a protein_coding protein_coding MGP_129S1SvImJ_T0086617.1 MGP_129S1SvImJ_G0033003.1 mouse_genomes_project 7 131155197 131158437 + MGP_129S1SvImJ_P0086617 Doc2a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0015888.1 MGP_129S1SvImJ_G0013977.1 mouse_genomes_project 7 103519476 103519913 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002241.1 MGP_129S1SvImJ_G0002153.1 mouse_genomes_project 7 39417184 39420168 + TEC TEC MGP_129S1SvImJ_T0081866.1 MGP_129S1SvImJ_G0031735.1 mouse_genomes_project 7 15823257 15833381 + MGP_129S1SvImJ_P0081866 Ceacam13 protein_coding protein_coding MGP_129S1SvImJ_T0081867.1 MGP_129S1SvImJ_G0031735.1 mouse_genomes_project 7 15823257 15826854 + MGP_129S1SvImJ_P0081867 Ceacam13 protein_coding protein_coding MGP_129S1SvImJ_T0081914.1 MGP_129S1SvImJ_G0031756.1 mouse_genomes_project 7 17027103 17035919 + MGP_129S1SvImJ_P0081914 Dmwd protein_coding protein_coding MGP_129S1SvImJ_T0081915.1 MGP_129S1SvImJ_G0031756.1 mouse_genomes_project 7 17027134 17035919 + MGP_129S1SvImJ_P0081915 Dmwd protein_coding protein_coding MGP_129S1SvImJ_T0081916.1 MGP_129S1SvImJ_G0031756.1 mouse_genomes_project 7 17031134 17035918 + Dmwd protein_coding processed_transcript MGP_129S1SvImJ_T0081917.1 MGP_129S1SvImJ_G0031756.1 mouse_genomes_project 7 17031167 17035645 + Dmwd protein_coding processed_transcript MGP_129S1SvImJ_T0085954.1 MGP_129S1SvImJ_G0032872.1 mouse_genomes_project 7 116566416 116569911 + MGP_129S1SvImJ_P0085954 Rassf10 protein_coding protein_coding MGP_129S1SvImJ_T0082765.1 MGP_129S1SvImJ_G0031981.1 mouse_genomes_project 7 28205028 28211732 + MGP_129S1SvImJ_P0082765 Ppp1r14a protein_coding protein_coding MGP_129S1SvImJ_T0087923.1 MGP_129S1SvImJ_G0033295.1 mouse_genomes_project 7 150309462 150319401 - MGP_129S1SvImJ_P0087923 Ccnd1 protein_coding protein_coding MGP_129S1SvImJ_T0087924.1 MGP_129S1SvImJ_G0033295.1 mouse_genomes_project 7 150316825 150317728 - Ccnd1 protein_coding retained_intron MGP_129S1SvImJ_T0082737.1 MGP_129S1SvImJ_G0031972.1 mouse_genomes_project 7 28059887 28063584 - MGP_129S1SvImJ_P0082737 Fam98c protein_coding protein_coding MGP_129S1SvImJ_T0082738.1 MGP_129S1SvImJ_G0031972.1 mouse_genomes_project 7 28059888 28063557 - Fam98c protein_coding retained_intron MGP_129S1SvImJ_T0082739.1 MGP_129S1SvImJ_G0031972.1 mouse_genomes_project 7 28059888 28063577 - Fam98c protein_coding retained_intron MGP_129S1SvImJ_T0082740.1 MGP_129S1SvImJ_G0031972.1 mouse_genomes_project 7 28059888 28063557 - Fam98c protein_coding retained_intron MGP_129S1SvImJ_T0082741.1 MGP_129S1SvImJ_G0031972.1 mouse_genomes_project 7 28059888 28063557 - MGP_129S1SvImJ_P0082741 Fam98c protein_coding protein_coding MGP_129S1SvImJ_T0082742.1 MGP_129S1SvImJ_G0031972.1 mouse_genomes_project 7 28059895 28063534 - MGP_129S1SvImJ_P0082742 Fam98c protein_coding protein_coding MGP_129S1SvImJ_T0082743.1 MGP_129S1SvImJ_G0031972.1 mouse_genomes_project 7 28059930 28063093 - MGP_129S1SvImJ_P0082743 Fam98c protein_coding protein_coding MGP_129S1SvImJ_T0082744.1 MGP_129S1SvImJ_G0031972.1 mouse_genomes_project 7 28060770 28063608 - MGP_129S1SvImJ_P0082744 Fam98c protein_coding protein_coding MGP_129S1SvImJ_T0082745.1 MGP_129S1SvImJ_G0031972.1 mouse_genomes_project 7 28060801 28062977 - MGP_129S1SvImJ_P0082745 Fam98c protein_coding protein_coding MGP_129S1SvImJ_T0082746.1 MGP_129S1SvImJ_G0031972.1 mouse_genomes_project 7 28060884 28063577 - Fam98c protein_coding processed_transcript MGP_129S1SvImJ_T0018441.1 MGP_129S1SvImJ_G0015686.1 mouse_genomes_project 7 119812481 119821579 - 1700003G18Rik processed_transcript sense_overlapping MGP_129S1SvImJ_T0018442.1 MGP_129S1SvImJ_G0015686.1 mouse_genomes_project 7 119812620 119821526 - 1700003G18Rik processed_transcript sense_overlapping MGP_129S1SvImJ_T0018443.1 MGP_129S1SvImJ_G0015686.1 mouse_genomes_project 7 119820316 119821518 - 1700003G18Rik processed_transcript retained_intron MGP_129S1SvImJ_T0084045.1 MGP_129S1SvImJ_G0032294.1 mouse_genomes_project 7 49392153 49408079 + Zdhhc13 protein_coding processed_transcript MGP_129S1SvImJ_T0084046.1 MGP_129S1SvImJ_G0032294.1 mouse_genomes_project 7 49392232 49432451 + MGP_129S1SvImJ_P0084046 Zdhhc13 protein_coding protein_coding MGP_129S1SvImJ_T0015853.1 MGP_129S1SvImJ_G0013942.1 mouse_genomes_project 7 82201421 82201678 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0083586.1 MGP_129S1SvImJ_G0032165.1 mouse_genomes_project 7 44670158 44675047 + MGP_129S1SvImJ_P0083586 Fam71e1 protein_coding protein_coding MGP_129S1SvImJ_T0083587.1 MGP_129S1SvImJ_G0032165.1 mouse_genomes_project 7 44670165 44674212 + Fam71e1 protein_coding retained_intron MGP_129S1SvImJ_T0083588.1 MGP_129S1SvImJ_G0032165.1 mouse_genomes_project 7 44670176 44670726 + MGP_129S1SvImJ_P0083588 Fam71e1 protein_coding protein_coding MGP_129S1SvImJ_T0083589.1 MGP_129S1SvImJ_G0032165.1 mouse_genomes_project 7 44670235 44675040 + MGP_129S1SvImJ_P0083589 Fam71e1 protein_coding protein_coding MGP_129S1SvImJ_T0083590.1 MGP_129S1SvImJ_G0032165.1 mouse_genomes_project 7 44670245 44675040 + MGP_129S1SvImJ_P0083590 Fam71e1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083591.1 MGP_129S1SvImJ_G0032165.1 mouse_genomes_project 7 44670249 44675393 + Fam71e1 protein_coding retained_intron MGP_129S1SvImJ_T0083592.1 MGP_129S1SvImJ_G0032165.1 mouse_genomes_project 7 44670249 44671590 + Fam71e1 protein_coding retained_intron MGP_129S1SvImJ_T0083593.1 MGP_129S1SvImJ_G0032165.1 mouse_genomes_project 7 44670271 44674241 + Fam71e1 protein_coding retained_intron MGP_129S1SvImJ_T0083594.1 MGP_129S1SvImJ_G0032165.1 mouse_genomes_project 7 44674296 44675039 + Fam71e1 protein_coding processed_transcript MGP_129S1SvImJ_T0081677.1 MGP_129S1SvImJ_G0031673.1 mouse_genomes_project 7 10791418 10802169 + MGP_129S1SvImJ_P0081677 Cabp5 protein_coding protein_coding MGP_129S1SvImJ_T0081678.1 MGP_129S1SvImJ_G0031673.1 mouse_genomes_project 7 10791581 10799594 + MGP_129S1SvImJ_P0081678 Cabp5 protein_coding protein_coding MGP_129S1SvImJ_T0081679.1 MGP_129S1SvImJ_G0031673.1 mouse_genomes_project 7 10791594 10798845 + MGP_129S1SvImJ_P0081679 Cabp5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084192.1 MGP_129S1SvImJ_G0032324.1 mouse_genomes_project 7 60781378 60803271 - MGP_129S1SvImJ_P0084192 Snrpn protein_coding protein_coding MGP_129S1SvImJ_T0084193.1 MGP_129S1SvImJ_G0032324.1 mouse_genomes_project 7 60781385 60952194 - MGP_129S1SvImJ_P0084193 Snrpn protein_coding protein_coding MGP_129S1SvImJ_T0081520.1 MGP_129S1SvImJ_G0031602.1 mouse_genomes_project 7 3439487 3455396 + MGP_129S1SvImJ_P0081520 Zfp78 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0081521.1 MGP_129S1SvImJ_G0031602.1 mouse_genomes_project 7 3447661 3455396 + MGP_129S1SvImJ_P0081521 Zfp78 protein_coding protein_coding MGP_129S1SvImJ_T0082020.1 MGP_129S1SvImJ_G0031783.1 mouse_genomes_project 7 17556629 17590561 - MGP_129S1SvImJ_P0082020 Ppp1r37 protein_coding protein_coding MGP_129S1SvImJ_T0002291.1 MGP_129S1SvImJ_G0002202.1 mouse_genomes_project 7 79186197 79187050 + TEC TEC MGP_129S1SvImJ_T0081469.1 MGP_129S1SvImJ_G0031581.1 mouse_genomes_project 7 2022008 2026346 + MGP_129S1SvImJ_P0081469 protein_coding protein_coding MGP_129S1SvImJ_T0002269.1 MGP_129S1SvImJ_G0002181.1 mouse_genomes_project 7 65660170 65660775 + TEC TEC MGP_129S1SvImJ_T0102812.1 MGP_129S1SvImJ_G0040644.1 mouse_genomes_project 7 107216228 107216690 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0084020.1 MGP_129S1SvImJ_G0032277.1 mouse_genomes_project 7 47331560 47370280 - MGP_129S1SvImJ_P0084020 Uevld protein_coding protein_coding MGP_129S1SvImJ_T0015715.1 MGP_129S1SvImJ_G0013804.1 mouse_genomes_project 7 9588371 9589026 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084918.1 MGP_129S1SvImJ_G0032498.1 mouse_genomes_project 7 92038856 92205979 + protein_coding retained_intron MGP_129S1SvImJ_T0084919.1 MGP_129S1SvImJ_G0032498.1 mouse_genomes_project 7 92038879 92243130 + MGP_129S1SvImJ_P0084919 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0084920.1 MGP_129S1SvImJ_G0032498.1 mouse_genomes_project 7 92038998 92052187 + protein_coding processed_transcript MGP_129S1SvImJ_T0084921.1 MGP_129S1SvImJ_G0032498.1 mouse_genomes_project 7 92039350 92240321 + protein_coding retained_intron MGP_129S1SvImJ_T0084922.1 MGP_129S1SvImJ_G0032498.1 mouse_genomes_project 7 92131814 92215826 + protein_coding processed_transcript MGP_129S1SvImJ_T0084923.1 MGP_129S1SvImJ_G0032498.1 mouse_genomes_project 7 92219424 92243195 + MGP_129S1SvImJ_P0084923 protein_coding protein_coding MGP_129S1SvImJ_T0100049.1 MGP_129S1SvImJ_G0038116.1 mouse_genomes_project 7 37348403 37348509 - Gm22302 snRNA snRNA MGP_129S1SvImJ_T0083015.1 MGP_129S1SvImJ_G0032036.1 mouse_genomes_project 7 29653228 29666222 - MGP_129S1SvImJ_P0083015 Rbm42 protein_coding protein_coding MGP_129S1SvImJ_T0083016.1 MGP_129S1SvImJ_G0032036.1 mouse_genomes_project 7 29653233 29666049 - MGP_129S1SvImJ_P0083016 Rbm42 protein_coding protein_coding MGP_129S1SvImJ_T0083017.1 MGP_129S1SvImJ_G0032036.1 mouse_genomes_project 7 29660006 29661893 - Rbm42 protein_coding retained_intron MGP_129S1SvImJ_T0085170.1 MGP_129S1SvImJ_G0032559.1 mouse_genomes_project 7 102695458 102753996 + MGP_129S1SvImJ_P0085170 Xrra1 protein_coding protein_coding MGP_129S1SvImJ_T0085784.1 MGP_129S1SvImJ_G0032827.1 mouse_genomes_project 7 112051037 112051982 + MGP_129S1SvImJ_P0085784 Olfr510 protein_coding protein_coding MGP_129S1SvImJ_T0015821.1 MGP_129S1SvImJ_G0013910.1 mouse_genomes_project 7 57551038 57552050 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081282.1 MGP_129S1SvImJ_G0031537.1 mouse_genomes_project 7 1043081 1049279 + Ttyh1 protein_coding processed_transcript MGP_129S1SvImJ_T0081283.1 MGP_129S1SvImJ_G0031537.1 mouse_genomes_project 7 1043203 1058640 + Ttyh1 protein_coding retained_intron MGP_129S1SvImJ_T0081284.1 MGP_129S1SvImJ_G0031537.1 mouse_genomes_project 7 1043203 1059038 + MGP_129S1SvImJ_P0081284 Ttyh1 protein_coding protein_coding MGP_129S1SvImJ_T0081285.1 MGP_129S1SvImJ_G0031537.1 mouse_genomes_project 7 1043206 1060370 + MGP_129S1SvImJ_P0081285 Ttyh1 protein_coding protein_coding MGP_129S1SvImJ_T0081286.1 MGP_129S1SvImJ_G0031537.1 mouse_genomes_project 7 1043229 1049310 + Ttyh1 protein_coding processed_transcript MGP_129S1SvImJ_T0081287.1 MGP_129S1SvImJ_G0031537.1 mouse_genomes_project 7 1043258 1059024 + MGP_129S1SvImJ_P0081287 Ttyh1 protein_coding protein_coding MGP_129S1SvImJ_T0081288.1 MGP_129S1SvImJ_G0031537.1 mouse_genomes_project 7 1043261 1049319 + MGP_129S1SvImJ_P0081288 Ttyh1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081289.1 MGP_129S1SvImJ_G0031537.1 mouse_genomes_project 7 1043295 1051956 + MGP_129S1SvImJ_P0081289 Ttyh1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081290.1 MGP_129S1SvImJ_G0031537.1 mouse_genomes_project 7 1043427 1059021 + MGP_129S1SvImJ_P0081290 Ttyh1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081291.1 MGP_129S1SvImJ_G0031537.1 mouse_genomes_project 7 1043893 1049251 + Ttyh1 protein_coding processed_transcript MGP_129S1SvImJ_T0081292.1 MGP_129S1SvImJ_G0031537.1 mouse_genomes_project 7 1045847 1059098 + Ttyh1 protein_coding retained_intron MGP_129S1SvImJ_T0081293.1 MGP_129S1SvImJ_G0031537.1 mouse_genomes_project 7 1048179 1057930 + MGP_129S1SvImJ_P0081293 Ttyh1 protein_coding protein_coding MGP_129S1SvImJ_T0081294.1 MGP_129S1SvImJ_G0031537.1 mouse_genomes_project 7 1049357 1057110 + Ttyh1 protein_coding processed_transcript MGP_129S1SvImJ_T0081295.1 MGP_129S1SvImJ_G0031537.1 mouse_genomes_project 7 1051916 1053810 + Ttyh1 protein_coding retained_intron MGP_129S1SvImJ_T0081296.1 MGP_129S1SvImJ_G0031537.1 mouse_genomes_project 7 1052936 1056888 + Ttyh1 protein_coding retained_intron MGP_129S1SvImJ_T0081297.1 MGP_129S1SvImJ_G0031537.1 mouse_genomes_project 7 1054309 1055581 + Ttyh1 protein_coding retained_intron MGP_129S1SvImJ_T0081298.1 MGP_129S1SvImJ_G0031537.1 mouse_genomes_project 7 1054827 1055725 + Ttyh1 protein_coding retained_intron MGP_129S1SvImJ_T0081299.1 MGP_129S1SvImJ_G0031537.1 mouse_genomes_project 7 1056720 1057663 + Ttyh1 protein_coding retained_intron MGP_129S1SvImJ_T0084093.1 MGP_129S1SvImJ_G0032306.1 mouse_genomes_project 7 52626025 52627716 - MGP_129S1SvImJ_P0084093 Fancf protein_coding protein_coding MGP_129S1SvImJ_T0015884.1 MGP_129S1SvImJ_G0013973.1 mouse_genomes_project 7 101612746 101613110 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084426.1 MGP_129S1SvImJ_G0032373.1 mouse_genomes_project 7 76762973 76968160 - MGP_129S1SvImJ_P0084426 Sv2b protein_coding protein_coding MGP_129S1SvImJ_T0084427.1 MGP_129S1SvImJ_G0032373.1 mouse_genomes_project 7 76762976 76967276 - MGP_129S1SvImJ_P0084427 Sv2b protein_coding protein_coding MGP_129S1SvImJ_T0084428.1 MGP_129S1SvImJ_G0032373.1 mouse_genomes_project 7 76764413 76875629 - MGP_129S1SvImJ_P0084428 Sv2b protein_coding protein_coding MGP_129S1SvImJ_T0084429.1 MGP_129S1SvImJ_G0032373.1 mouse_genomes_project 7 76768022 76803002 - MGP_129S1SvImJ_P0084429 Sv2b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084430.1 MGP_129S1SvImJ_G0032373.1 mouse_genomes_project 7 76812816 76817479 - Sv2b protein_coding processed_transcript MGP_129S1SvImJ_T0084431.1 MGP_129S1SvImJ_G0032373.1 mouse_genomes_project 7 76812816 76817468 - Sv2b protein_coding processed_transcript MGP_129S1SvImJ_T0084432.1 MGP_129S1SvImJ_G0032373.1 mouse_genomes_project 7 76858019 76967206 - Sv2b protein_coding retained_intron MGP_129S1SvImJ_T0085375.1 MGP_129S1SvImJ_G0032596.1 mouse_genomes_project 7 105041239 105044316 - MGP_129S1SvImJ_P0085375 Il18bp protein_coding protein_coding MGP_129S1SvImJ_T0010946.1 MGP_129S1SvImJ_G0009062.1 mouse_genomes_project 7 132909014 132909139 - Gm24365 miRNA miRNA MGP_129S1SvImJ_T0101301.1 MGP_129S1SvImJ_G0039368.1 mouse_genomes_project 7 34291540 34291670 - Gm25922 snoRNA snoRNA MGP_129S1SvImJ_T0086183.1 MGP_129S1SvImJ_G0032921.1 mouse_genomes_project 7 123831283 123854885 + MGP_129S1SvImJ_P0086183 Lyrm1 protein_coding protein_coding MGP_129S1SvImJ_T0086184.1 MGP_129S1SvImJ_G0032921.1 mouse_genomes_project 7 123831289 123854416 + MGP_129S1SvImJ_P0086184 Lyrm1 protein_coding protein_coding MGP_129S1SvImJ_T0086185.1 MGP_129S1SvImJ_G0032921.1 mouse_genomes_project 7 123831714 123854881 + MGP_129S1SvImJ_P0086185 Lyrm1 protein_coding protein_coding MGP_129S1SvImJ_T0086186.1 MGP_129S1SvImJ_G0032921.1 mouse_genomes_project 7 123835530 123854887 + MGP_129S1SvImJ_P0086186 Lyrm1 protein_coding protein_coding MGP_129S1SvImJ_T0085594.1 MGP_129S1SvImJ_G0032732.1 mouse_genomes_project 7 108119855 108120809 + MGP_129S1SvImJ_P0085594 Olfr669 protein_coding protein_coding MGP_129S1SvImJ_T0098632.1 MGP_129S1SvImJ_G0036717.1 mouse_genomes_project 7 18083082 18083201 - n-R5s152 rRNA rRNA MGP_129S1SvImJ_T0085595.1 MGP_129S1SvImJ_G0032733.1 mouse_genomes_project 7 108141119 108142058 - MGP_129S1SvImJ_P0085595 Olfr670 protein_coding protein_coding MGP_129S1SvImJ_T0083142.1 MGP_129S1SvImJ_G0032059.1 mouse_genomes_project 7 30119477 30131139 + MGP_129S1SvImJ_P0083142 Lgi4 protein_coding protein_coding MGP_129S1SvImJ_T0083143.1 MGP_129S1SvImJ_G0032059.1 mouse_genomes_project 7 30120722 30123826 + MGP_129S1SvImJ_P0083143 Lgi4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083144.1 MGP_129S1SvImJ_G0032059.1 mouse_genomes_project 7 30120760 30124232 + MGP_129S1SvImJ_P0083144 Lgi4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083145.1 MGP_129S1SvImJ_G0032059.1 mouse_genomes_project 7 30123706 30124754 + MGP_129S1SvImJ_P0083145 Lgi4 protein_coding protein_coding MGP_129S1SvImJ_T0015875.1 MGP_129S1SvImJ_G0013964.1 mouse_genomes_project 7 99110928 99111400 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102820.1 MGP_129S1SvImJ_G0040652.1 mouse_genomes_project 7 109094884 109738556 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0087281.1 MGP_129S1SvImJ_G0033143.1 mouse_genomes_project 7 143833087 143863082 + Ppp2r2d protein_coding retained_intron MGP_129S1SvImJ_T0087282.1 MGP_129S1SvImJ_G0033143.1 mouse_genomes_project 7 143833394 143861164 + MGP_129S1SvImJ_P0087282 Ppp2r2d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087283.1 MGP_129S1SvImJ_G0033143.1 mouse_genomes_project 7 143833517 143875145 + MGP_129S1SvImJ_P0087283 Ppp2r2d protein_coding protein_coding MGP_129S1SvImJ_T0087284.1 MGP_129S1SvImJ_G0033143.1 mouse_genomes_project 7 143833595 143861207 + Ppp2r2d protein_coding processed_transcript MGP_129S1SvImJ_T0087285.1 MGP_129S1SvImJ_G0033143.1 mouse_genomes_project 7 143833628 143867948 + MGP_129S1SvImJ_P0087285 Ppp2r2d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087286.1 MGP_129S1SvImJ_G0033143.1 mouse_genomes_project 7 143833868 143861182 + Ppp2r2d protein_coding processed_transcript MGP_129S1SvImJ_T0087287.1 MGP_129S1SvImJ_G0033143.1 mouse_genomes_project 7 143859789 143867942 + MGP_129S1SvImJ_P0087287 Ppp2r2d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0002221.1 MGP_129S1SvImJ_G0002133.1 mouse_genomes_project 7 15637825 15639987 - TEC TEC MGP_129S1SvImJ_T0015912.1 MGP_129S1SvImJ_G0014001.1 mouse_genomes_project 7 126953988 126954315 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081780.1 MGP_129S1SvImJ_G0031709.1 mouse_genomes_project 7 14102592 14146563 + MGP_129S1SvImJ_P0081780 Zc3h4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0081781.1 MGP_129S1SvImJ_G0031709.1 mouse_genomes_project 7 14102907 14146560 + MGP_129S1SvImJ_P0081781 Zc3h4 protein_coding protein_coding MGP_129S1SvImJ_T0085226.1 MGP_129S1SvImJ_G0032572.1 mouse_genomes_project 7 103428576 103431663 + MGP_129S1SvImJ_P0085226 Coa4 protein_coding protein_coding MGP_129S1SvImJ_T0085227.1 MGP_129S1SvImJ_G0032572.1 mouse_genomes_project 7 103428708 103430747 + MGP_129S1SvImJ_P0085227 Coa4 protein_coding protein_coding MGP_129S1SvImJ_T0010888.1 MGP_129S1SvImJ_G0009004.1 mouse_genomes_project 7 45357116 45357181 + Mir150 miRNA miRNA MGP_129S1SvImJ_T0085824.1 MGP_129S1SvImJ_G0032844.1 mouse_genomes_project 7 113146894 113155394 + MGP_129S1SvImJ_P0085824 Akip1 protein_coding protein_coding MGP_129S1SvImJ_T0085825.1 MGP_129S1SvImJ_G0032844.1 mouse_genomes_project 7 113146956 113152178 + MGP_129S1SvImJ_P0085825 Akip1 protein_coding protein_coding MGP_129S1SvImJ_T0085826.1 MGP_129S1SvImJ_G0032844.1 mouse_genomes_project 7 113152037 113155173 + Akip1 protein_coding processed_transcript MGP_129S1SvImJ_T0085736.1 MGP_129S1SvImJ_G0032786.1 mouse_genomes_project 7 110362864 110364591 - MGP_129S1SvImJ_P0085736 Olfr2 protein_coding protein_coding MGP_129S1SvImJ_T0100092.1 MGP_129S1SvImJ_G0038159.1 mouse_genomes_project 7 131223624 131223731 - Gm23445 snRNA snRNA MGP_129S1SvImJ_T0102689.1 MGP_129S1SvImJ_G0040522.1 mouse_genomes_project 7 9599858 9600809 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0083013.1 MGP_129S1SvImJ_G0032034.1 mouse_genomes_project 7 29625952 29634909 - MGP_129S1SvImJ_P0083013 Cox6b1 protein_coding protein_coding MGP_129S1SvImJ_T0008985.1 MGP_129S1SvImJ_G0007245.1 mouse_genomes_project 7 102612928 102614463 - F730035P03Rik lincRNA lincRNA MGP_129S1SvImJ_T0082248.1 MGP_129S1SvImJ_G0031850.1 mouse_genomes_project 7 23385978 23388993 - MGP_129S1SvImJ_P0082248 Rabac1 protein_coding protein_coding MGP_129S1SvImJ_T0082249.1 MGP_129S1SvImJ_G0031850.1 mouse_genomes_project 7 23385979 23388223 - Rabac1 protein_coding retained_intron MGP_129S1SvImJ_T0082250.1 MGP_129S1SvImJ_G0031850.1 mouse_genomes_project 7 23385987 23388265 - Rabac1 protein_coding processed_transcript MGP_129S1SvImJ_T0082251.1 MGP_129S1SvImJ_G0031850.1 mouse_genomes_project 7 23385987 23388877 - MGP_129S1SvImJ_P0082251 Rabac1 protein_coding protein_coding MGP_129S1SvImJ_T0082252.1 MGP_129S1SvImJ_G0031850.1 mouse_genomes_project 7 23385988 23388466 - Rabac1 protein_coding processed_transcript MGP_129S1SvImJ_T0082253.1 MGP_129S1SvImJ_G0031850.1 mouse_genomes_project 7 23387725 23388791 - Rabac1 protein_coding retained_intron MGP_129S1SvImJ_T0009027.1 MGP_129S1SvImJ_G0007270.1 mouse_genomes_project 7 131036316 131038100 + 4930448A20Rik lincRNA lincRNA MGP_129S1SvImJ_T0081370.1 MGP_129S1SvImJ_G0031550.1 mouse_genomes_project 7 1459923 1467450 - MGP_129S1SvImJ_P0081370 Syt5 protein_coding protein_coding MGP_129S1SvImJ_T0081371.1 MGP_129S1SvImJ_G0031550.1 mouse_genomes_project 7 1466570 1468424 - MGP_129S1SvImJ_P0081371 Syt5 protein_coding protein_coding MGP_129S1SvImJ_T0081372.1 MGP_129S1SvImJ_G0031550.1 mouse_genomes_project 7 1467175 1467856 - MGP_129S1SvImJ_P0081372 Syt5 protein_coding protein_coding MGP_129S1SvImJ_T0015829.1 MGP_129S1SvImJ_G0013918.1 mouse_genomes_project 7 63565136 63565388 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084858.1 MGP_129S1SvImJ_G0032462.1 mouse_genomes_project 7 87125846 87152808 - MGP_129S1SvImJ_P0084858 Vmn2r65 protein_coding protein_coding MGP_129S1SvImJ_T0101976.1 MGP_129S1SvImJ_G0039851.1 mouse_genomes_project 7 41310748 41311217 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0005305.1 MGP_129S1SvImJ_G0004501.1 mouse_genomes_project 7 126038905 126046262 + Gm44987 antisense antisense MGP_129S1SvImJ_T0085722.1 MGP_129S1SvImJ_G0032773.1 mouse_genomes_project 7 110148573 110149524 - MGP_129S1SvImJ_P0085722 Olfr699 protein_coding protein_coding MGP_129S1SvImJ_T0102749.1 MGP_129S1SvImJ_G0040581.1 mouse_genomes_project 7 47728273 47729191 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0101314.1 MGP_129S1SvImJ_G0039381.1 mouse_genomes_project 7 58980494 58980626 - Gm26288 snoRNA snoRNA MGP_129S1SvImJ_T0005285.1 MGP_129S1SvImJ_G0004488.1 mouse_genomes_project 7 107485957 107486786 - antisense antisense MGP_129S1SvImJ_T0002313.1 MGP_129S1SvImJ_G0002224.1 mouse_genomes_project 7 121162190 121164112 + TEC TEC MGP_129S1SvImJ_T0084723.1 MGP_129S1SvImJ_G0032422.1 mouse_genomes_project 7 82914839 82958001 - Sec11a protein_coding processed_transcript MGP_129S1SvImJ_T0084724.1 MGP_129S1SvImJ_G0032422.1 mouse_genomes_project 7 82917666 82957969 - MGP_129S1SvImJ_P0084724 Sec11a protein_coding protein_coding MGP_129S1SvImJ_T0084725.1 MGP_129S1SvImJ_G0032422.1 mouse_genomes_project 7 82925756 82935908 - Sec11a protein_coding processed_transcript MGP_129S1SvImJ_T0084726.1 MGP_129S1SvImJ_G0032422.1 mouse_genomes_project 7 82925756 82933832 - Sec11a protein_coding retained_intron MGP_129S1SvImJ_T0084727.1 MGP_129S1SvImJ_G0032422.1 mouse_genomes_project 7 82925756 82958236 - MGP_129S1SvImJ_P0084727 Sec11a protein_coding protein_coding MGP_129S1SvImJ_T0084728.1 MGP_129S1SvImJ_G0032422.1 mouse_genomes_project 7 82925945 82926710 - Sec11a protein_coding retained_intron MGP_129S1SvImJ_T0084729.1 MGP_129S1SvImJ_G0032422.1 mouse_genomes_project 7 82926040 82958236 - MGP_129S1SvImJ_P0084729 Sec11a protein_coding protein_coding MGP_129S1SvImJ_T0084730.1 MGP_129S1SvImJ_G0032422.1 mouse_genomes_project 7 82926142 82957967 - Sec11a protein_coding processed_transcript MGP_129S1SvImJ_T0084731.1 MGP_129S1SvImJ_G0032422.1 mouse_genomes_project 7 82926468 82958236 - MGP_129S1SvImJ_P0084731 Sec11a protein_coding protein_coding MGP_129S1SvImJ_T0084732.1 MGP_129S1SvImJ_G0032422.1 mouse_genomes_project 7 82931274 82958198 - Sec11a protein_coding retained_intron MGP_129S1SvImJ_T0085779.1 MGP_129S1SvImJ_G0032822.1 mouse_genomes_project 7 111946688 111947650 - MGP_129S1SvImJ_P0085779 Olfr504 protein_coding protein_coding MGP_129S1SvImJ_T0015695.1 MGP_129S1SvImJ_G0013784.1 mouse_genomes_project 7 865934 866811 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0083348.1 MGP_129S1SvImJ_G0032098.1 mouse_genomes_project 7 36974877 36984598 - MGP_129S1SvImJ_P0083348 Zfp536 protein_coding protein_coding MGP_129S1SvImJ_T0083349.1 MGP_129S1SvImJ_G0032098.1 mouse_genomes_project 7 36983721 37292362 - MGP_129S1SvImJ_P0083349 Zfp536 protein_coding protein_coding MGP_129S1SvImJ_T0083350.1 MGP_129S1SvImJ_G0032098.1 mouse_genomes_project 7 36983726 37292703 - MGP_129S1SvImJ_P0083350 Zfp536 protein_coding protein_coding MGP_129S1SvImJ_T0083351.1 MGP_129S1SvImJ_G0032098.1 mouse_genomes_project 7 36983739 37293721 - MGP_129S1SvImJ_P0083351 Zfp536 protein_coding protein_coding MGP_129S1SvImJ_T0083352.1 MGP_129S1SvImJ_G0032098.1 mouse_genomes_project 7 36983794 37297017 - MGP_129S1SvImJ_P0083352 Zfp536 protein_coding protein_coding MGP_129S1SvImJ_T0083353.1 MGP_129S1SvImJ_G0032098.1 mouse_genomes_project 7 37082648 37293523 - MGP_129S1SvImJ_P0083353 Zfp536 protein_coding protein_coding MGP_129S1SvImJ_T0083354.1 MGP_129S1SvImJ_G0032098.1 mouse_genomes_project 7 37082778 37297785 - MGP_129S1SvImJ_P0083354 Zfp536 protein_coding protein_coding MGP_129S1SvImJ_T0083355.1 MGP_129S1SvImJ_G0032098.1 mouse_genomes_project 7 37229180 37297721 - Zfp536 protein_coding processed_transcript MGP_129S1SvImJ_T0083356.1 MGP_129S1SvImJ_G0032098.1 mouse_genomes_project 7 37235428 37297706 - Zfp536 protein_coding retained_intron MGP_129S1SvImJ_T0083357.1 MGP_129S1SvImJ_G0032098.1 mouse_genomes_project 7 37296522 37297727 - Zfp536 protein_coding retained_intron MGP_129S1SvImJ_T0100063.1 MGP_129S1SvImJ_G0038130.1 mouse_genomes_project 7 70867460 70867567 - Gm23815 snRNA snRNA MGP_129S1SvImJ_T0086285.1 MGP_129S1SvImJ_G0032951.1 mouse_genomes_project 7 126176043 126204000 - MGP_129S1SvImJ_P0086285 Palb2 protein_coding protein_coding MGP_129S1SvImJ_T0086286.1 MGP_129S1SvImJ_G0032951.1 mouse_genomes_project 7 126176043 126204037 - MGP_129S1SvImJ_P0086286 Palb2 protein_coding protein_coding MGP_129S1SvImJ_T0086287.1 MGP_129S1SvImJ_G0032951.1 mouse_genomes_project 7 126176043 126203935 - MGP_129S1SvImJ_P0086287 Palb2 protein_coding protein_coding MGP_129S1SvImJ_T0086288.1 MGP_129S1SvImJ_G0032951.1 mouse_genomes_project 7 126176046 126180878 - Palb2 protein_coding retained_intron MGP_129S1SvImJ_T0086289.1 MGP_129S1SvImJ_G0032951.1 mouse_genomes_project 7 126176048 126195423 - MGP_129S1SvImJ_P0086289 Palb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086290.1 MGP_129S1SvImJ_G0032951.1 mouse_genomes_project 7 126180409 126203979 - MGP_129S1SvImJ_P0086290 Palb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086291.1 MGP_129S1SvImJ_G0032951.1 mouse_genomes_project 7 126180409 126204008 - MGP_129S1SvImJ_P0086291 Palb2 protein_coding protein_coding MGP_129S1SvImJ_T0086292.1 MGP_129S1SvImJ_G0032951.1 mouse_genomes_project 7 126196661 126204010 - Palb2 protein_coding retained_intron MGP_129S1SvImJ_T0086293.1 MGP_129S1SvImJ_G0032951.1 mouse_genomes_project 7 126201929 126204076 - Palb2 protein_coding retained_intron MGP_129S1SvImJ_T0085682.1 MGP_129S1SvImJ_G0032761.1 mouse_genomes_project 7 109001495 109006070 - MGP_129S1SvImJ_P0085682 Rrp8 protein_coding protein_coding MGP_129S1SvImJ_T0085683.1 MGP_129S1SvImJ_G0032761.1 mouse_genomes_project 7 109001692 109006665 - MGP_129S1SvImJ_P0085683 Rrp8 protein_coding protein_coding MGP_129S1SvImJ_T0085684.1 MGP_129S1SvImJ_G0032761.1 mouse_genomes_project 7 109001928 109002970 - Rrp8 protein_coding retained_intron MGP_129S1SvImJ_T0085685.1 MGP_129S1SvImJ_G0032761.1 mouse_genomes_project 7 109002294 109003352 - Rrp8 protein_coding processed_transcript MGP_129S1SvImJ_T0085686.1 MGP_129S1SvImJ_G0032761.1 mouse_genomes_project 7 109002294 109003235 - Rrp8 protein_coding retained_intron MGP_129S1SvImJ_T0085687.1 MGP_129S1SvImJ_G0032761.1 mouse_genomes_project 7 109003980 109005662 - Rrp8 protein_coding processed_transcript MGP_129S1SvImJ_T0015779.1 MGP_129S1SvImJ_G0013868.1 mouse_genomes_project 7 33781500 33782145 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085609.1 MGP_129S1SvImJ_G0032747.1 mouse_genomes_project 7 108588695 108589664 - MGP_129S1SvImJ_P0085609 Olfr691 protein_coding protein_coding MGP_129S1SvImJ_T0010953.1 MGP_129S1SvImJ_G0009069.1 mouse_genomes_project 7 145065204 145065270 - Mir7062 miRNA miRNA MGP_129S1SvImJ_T0083514.1 MGP_129S1SvImJ_G0032149.1 mouse_genomes_project 7 44018445 44031890 + MGP_129S1SvImJ_P0083514 protein_coding protein_coding MGP_129S1SvImJ_T0009014.1 MGP_129S1SvImJ_G0007261.1 mouse_genomes_project 7 125631621 125633310 + 1700025J12Rik lincRNA lincRNA MGP_129S1SvImJ_T0015870.1 MGP_129S1SvImJ_G0013959.1 mouse_genomes_project 7 97024752 97024884 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084015.1 MGP_129S1SvImJ_G0032276.1 mouse_genomes_project 7 47295311 47328314 - MGP_129S1SvImJ_P0084015 protein_coding protein_coding MGP_129S1SvImJ_T0084016.1 MGP_129S1SvImJ_G0032276.1 mouse_genomes_project 7 47295389 47297345 - protein_coding processed_transcript MGP_129S1SvImJ_T0084017.1 MGP_129S1SvImJ_G0032276.1 mouse_genomes_project 7 47307273 47322731 - MGP_129S1SvImJ_P0084017 protein_coding protein_coding MGP_129S1SvImJ_T0084018.1 MGP_129S1SvImJ_G0032276.1 mouse_genomes_project 7 47313863 47316320 - protein_coding retained_intron MGP_129S1SvImJ_T0084019.1 MGP_129S1SvImJ_G0032276.1 mouse_genomes_project 7 47314325 47328282 - MGP_129S1SvImJ_P0084019 protein_coding protein_coding MGP_129S1SvImJ_T0084034.1 MGP_129S1SvImJ_G0032286.1 mouse_genomes_project 7 48599029 48600081 - MGP_129S1SvImJ_P0084034 Mrgprx1 protein_coding protein_coding MGP_129S1SvImJ_T0008941.1 MGP_129S1SvImJ_G0007220.1 mouse_genomes_project 7 80679890 80680167 + 1700011D18Rik lincRNA lincRNA MGP_129S1SvImJ_T0085520.1 MGP_129S1SvImJ_G0032687.1 mouse_genomes_project 7 107101912 107102848 - MGP_129S1SvImJ_P0085520 Olfr66 protein_coding protein_coding MGP_129S1SvImJ_T0085185.1 MGP_129S1SvImJ_G0032564.1 mouse_genomes_project 7 103041975 103050176 + MGP_129S1SvImJ_P0085185 Kcne3 protein_coding protein_coding MGP_129S1SvImJ_T0085186.1 MGP_129S1SvImJ_G0032564.1 mouse_genomes_project 7 103044015 103050176 + MGP_129S1SvImJ_P0085186 Kcne3 protein_coding protein_coding MGP_129S1SvImJ_T0085187.1 MGP_129S1SvImJ_G0032564.1 mouse_genomes_project 7 103044015 103050176 + MGP_129S1SvImJ_P0085187 Kcne3 protein_coding protein_coding MGP_129S1SvImJ_T0085188.1 MGP_129S1SvImJ_G0032564.1 mouse_genomes_project 7 103044015 103050176 + MGP_129S1SvImJ_P0085188 Kcne3 protein_coding protein_coding MGP_129S1SvImJ_T0082666.1 MGP_129S1SvImJ_G0031957.1 mouse_genomes_project 7 27573831 27588964 + MGP_129S1SvImJ_P0082666 Sars2 protein_coding protein_coding MGP_129S1SvImJ_T0102745.1 MGP_129S1SvImJ_G0040577.1 mouse_genomes_project 7 44041304 44134757 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0086166.1 MGP_129S1SvImJ_G0032918.1 mouse_genomes_project 7 123714022 123728273 - protein_coding retained_intron MGP_129S1SvImJ_T0086167.1 MGP_129S1SvImJ_G0032918.1 mouse_genomes_project 7 123715276 123728280 - MGP_129S1SvImJ_P0086167 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086168.1 MGP_129S1SvImJ_G0032918.1 mouse_genomes_project 7 123716341 123728268 - MGP_129S1SvImJ_P0086168 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0086169.1 MGP_129S1SvImJ_G0032918.1 mouse_genomes_project 7 123717943 123719402 - protein_coding retained_intron MGP_129S1SvImJ_T0008995.1 MGP_129S1SvImJ_G0007250.1 mouse_genomes_project 7 117383311 117405826 + Gm29507 lincRNA lincRNA MGP_129S1SvImJ_T0083518.1 MGP_129S1SvImJ_G0032152.1 mouse_genomes_project 7 44036631 44040947 + MGP_129S1SvImJ_P0083518 Klk1b9 protein_coding protein_coding MGP_129S1SvImJ_T0084866.1 MGP_129S1SvImJ_G0032470.1 mouse_genomes_project 7 88516869 88517951 - MGP_129S1SvImJ_P0084866 Olfr310 protein_coding protein_coding MGP_129S1SvImJ_T0100088.1 MGP_129S1SvImJ_G0038155.1 mouse_genomes_project 7 127528546 127528649 - Gm23559 snRNA snRNA MGP_129S1SvImJ_T0015850.1 MGP_129S1SvImJ_G0013939.1 mouse_genomes_project 7 77459373 77459725 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082630.1 MGP_129S1SvImJ_G0031946.1 mouse_genomes_project 7 27224595 27236743 + MGP_129S1SvImJ_P0082630 Gmfg protein_coding protein_coding MGP_129S1SvImJ_T0082631.1 MGP_129S1SvImJ_G0031946.1 mouse_genomes_project 7 27224635 27236700 + MGP_129S1SvImJ_P0082631 Gmfg protein_coding protein_coding MGP_129S1SvImJ_T0082632.1 MGP_129S1SvImJ_G0031946.1 mouse_genomes_project 7 27230452 27236736 + MGP_129S1SvImJ_P0082632 Gmfg protein_coding protein_coding MGP_129S1SvImJ_T0082633.1 MGP_129S1SvImJ_G0031946.1 mouse_genomes_project 7 27230589 27236189 + MGP_129S1SvImJ_P0082633 Gmfg protein_coding protein_coding MGP_129S1SvImJ_T0082634.1 MGP_129S1SvImJ_G0031946.1 mouse_genomes_project 7 27233295 27240264 + Gmfg protein_coding processed_transcript MGP_129S1SvImJ_T0008940.1 MGP_129S1SvImJ_G0007219.1 mouse_genomes_project 7 80650111 80652490 + 5330411O13Rik lincRNA lincRNA MGP_129S1SvImJ_T0098641.1 MGP_129S1SvImJ_G0036726.1 mouse_genomes_project 7 120379958 120380083 - n-R5s157 rRNA rRNA MGP_129S1SvImJ_T0087640.1 MGP_129S1SvImJ_G0033236.1 mouse_genomes_project 7 146668506 146684939 + MGP_129S1SvImJ_P0087640 Tspan4 protein_coding protein_coding MGP_129S1SvImJ_T0087641.1 MGP_129S1SvImJ_G0033236.1 mouse_genomes_project 7 146668509 146684952 + MGP_129S1SvImJ_P0087641 Tspan4 protein_coding protein_coding MGP_129S1SvImJ_T0087642.1 MGP_129S1SvImJ_G0033236.1 mouse_genomes_project 7 146668732 146682756 + MGP_129S1SvImJ_P0087642 Tspan4 protein_coding protein_coding MGP_129S1SvImJ_T0087643.1 MGP_129S1SvImJ_G0033236.1 mouse_genomes_project 7 146675276 146686089 + MGP_129S1SvImJ_P0087643 Tspan4 protein_coding protein_coding MGP_129S1SvImJ_T0087644.1 MGP_129S1SvImJ_G0033236.1 mouse_genomes_project 7 146684624 146686096 + Tspan4 protein_coding retained_intron MGP_129S1SvImJ_T0087645.1 MGP_129S1SvImJ_G0033237.1 mouse_genomes_project 7 146686272 146734691 - MGP_129S1SvImJ_P0087645 Chid1 protein_coding protein_coding MGP_129S1SvImJ_T0087646.1 MGP_129S1SvImJ_G0033237.1 mouse_genomes_project 7 146688532 146734653 - Chid1 protein_coding retained_intron MGP_129S1SvImJ_T0087647.1 MGP_129S1SvImJ_G0033237.1 mouse_genomes_project 7 146689183 146727768 - MGP_129S1SvImJ_P0087647 Chid1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087648.1 MGP_129S1SvImJ_G0033237.1 mouse_genomes_project 7 146689183 146734695 - MGP_129S1SvImJ_P0087648 Chid1 protein_coding protein_coding MGP_129S1SvImJ_T0087649.1 MGP_129S1SvImJ_G0033237.1 mouse_genomes_project 7 146706158 146720792 - Chid1 protein_coding processed_transcript MGP_129S1SvImJ_T0087650.1 MGP_129S1SvImJ_G0033237.1 mouse_genomes_project 7 146709739 146734364 - MGP_129S1SvImJ_P0087650 Chid1 protein_coding protein_coding MGP_129S1SvImJ_T0087651.1 MGP_129S1SvImJ_G0033237.1 mouse_genomes_project 7 146726740 146734666 - Chid1 protein_coding retained_intron MGP_129S1SvImJ_T0102742.1 MGP_129S1SvImJ_G0040574.1 mouse_genomes_project 7 42264744 42264879 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102769.1 MGP_129S1SvImJ_G0040601.1 mouse_genomes_project 7 86972469 86974609 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085484.1 MGP_129S1SvImJ_G0032653.1 mouse_genomes_project 7 106445538 106446486 + MGP_129S1SvImJ_P0085484 Olfr599 protein_coding protein_coding MGP_129S1SvImJ_T0081221.1 MGP_129S1SvImJ_G0031526.1 mouse_genomes_project 7 586656 594300 - MGP_129S1SvImJ_P0081221 Leng1 protein_coding protein_coding MGP_129S1SvImJ_T0081222.1 MGP_129S1SvImJ_G0031526.1 mouse_genomes_project 7 587699 593907 - MGP_129S1SvImJ_P0081222 Leng1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0085806.1 MGP_129S1SvImJ_G0032840.1 mouse_genomes_project 7 112686664 112858682 - Stk33 protein_coding processed_transcript MGP_129S1SvImJ_T0085807.1 MGP_129S1SvImJ_G0032840.1 mouse_genomes_project 7 112686664 112858677 - MGP_129S1SvImJ_P0085807 Stk33 protein_coding protein_coding MGP_129S1SvImJ_T0085808.1 MGP_129S1SvImJ_G0032840.1 mouse_genomes_project 7 112686664 112858418 - MGP_129S1SvImJ_P0085808 Stk33 protein_coding protein_coding MGP_129S1SvImJ_T0085809.1 MGP_129S1SvImJ_G0032840.1 mouse_genomes_project 7 112686664 112858682 - MGP_129S1SvImJ_P0085809 Stk33 protein_coding protein_coding MGP_129S1SvImJ_T0085810.1 MGP_129S1SvImJ_G0032840.1 mouse_genomes_project 7 112687036 112858599 - MGP_129S1SvImJ_P0085810 Stk33 protein_coding protein_coding MGP_129S1SvImJ_T0082657.1 MGP_129S1SvImJ_G0031955.1 mouse_genomes_project 7 27537371 27566351 + MGP_129S1SvImJ_P0082657 Fbxo17 protein_coding protein_coding MGP_129S1SvImJ_T0082658.1 MGP_129S1SvImJ_G0031955.1 mouse_genomes_project 7 27537399 27566345 + MGP_129S1SvImJ_P0082658 Fbxo17 protein_coding protein_coding MGP_129S1SvImJ_T0082659.1 MGP_129S1SvImJ_G0031955.1 mouse_genomes_project 7 27537423 27551150 + Fbxo17 protein_coding retained_intron MGP_129S1SvImJ_T0082660.1 MGP_129S1SvImJ_G0031955.1 mouse_genomes_project 7 27537440 27566351 + MGP_129S1SvImJ_P0082660 Fbxo17 protein_coding protein_coding MGP_129S1SvImJ_T0082661.1 MGP_129S1SvImJ_G0031955.1 mouse_genomes_project 7 27558631 27565689 + MGP_129S1SvImJ_P0082661 Fbxo17 protein_coding protein_coding MGP_129S1SvImJ_T0081373.1 MGP_129S1SvImJ_G0031551.1 mouse_genomes_project 7 1469498 1518476 - MGP_129S1SvImJ_P0081373 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081374.1 MGP_129S1SvImJ_G0031551.1 mouse_genomes_project 7 1469839 1519376 - MGP_129S1SvImJ_P0081374 protein_coding protein_coding MGP_129S1SvImJ_T0081375.1 MGP_129S1SvImJ_G0031551.1 mouse_genomes_project 7 1473759 1483260 - protein_coding retained_intron MGP_129S1SvImJ_T0085956.1 MGP_129S1SvImJ_G0032874.1 mouse_genomes_project 7 116955117 117009421 - MGP_129S1SvImJ_P0085956 Btbd10 protein_coding protein_coding MGP_129S1SvImJ_T0085957.1 MGP_129S1SvImJ_G0032874.1 mouse_genomes_project 7 116955128 116986348 - MGP_129S1SvImJ_P0085957 Btbd10 protein_coding protein_coding MGP_129S1SvImJ_T0085958.1 MGP_129S1SvImJ_G0032874.1 mouse_genomes_project 7 116955137 116991734 - MGP_129S1SvImJ_P0085958 Btbd10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085959.1 MGP_129S1SvImJ_G0032874.1 mouse_genomes_project 7 116966484 116970507 - Btbd10 protein_coding retained_intron MGP_129S1SvImJ_T0085960.1 MGP_129S1SvImJ_G0032874.1 mouse_genomes_project 7 117008698 117009418 - Btbd10 protein_coding processed_transcript MGP_129S1SvImJ_T0085789.1 MGP_129S1SvImJ_G0032832.1 mouse_genomes_project 7 112220928 112222260 - MGP_129S1SvImJ_P0085789 Olfr519 protein_coding protein_coding MGP_129S1SvImJ_T0085790.1 MGP_129S1SvImJ_G0032832.1 mouse_genomes_project 7 112220928 112222410 - MGP_129S1SvImJ_P0085790 Olfr519 protein_coding protein_coding MGP_129S1SvImJ_T0010870.1 MGP_129S1SvImJ_G0008986.1 mouse_genomes_project 7 25789740 25789828 - Mir3101 miRNA miRNA MGP_129S1SvImJ_T0102758.1 MGP_129S1SvImJ_G0040590.1 mouse_genomes_project 7 48544874 48545314 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085780.1 MGP_129S1SvImJ_G0032823.1 mouse_genomes_project 7 111996031 111997039 + MGP_129S1SvImJ_P0085780 Olfr506 protein_coding protein_coding MGP_129S1SvImJ_T0085506.1 MGP_129S1SvImJ_G0032675.1 mouse_genomes_project 7 106906904 106907855 + MGP_129S1SvImJ_P0085506 protein_coding protein_coding MGP_129S1SvImJ_T0087916.1 MGP_129S1SvImJ_G0033293.1 mouse_genomes_project 7 150273134 150277563 + MGP_129S1SvImJ_P0087916 Fgf15 protein_coding protein_coding MGP_129S1SvImJ_T0086370.1 MGP_129S1SvImJ_G0032966.1 mouse_genomes_project 7 129656898 129674466 + MGP_129S1SvImJ_P0086370 Kdm8 protein_coding protein_coding MGP_129S1SvImJ_T0086371.1 MGP_129S1SvImJ_G0032966.1 mouse_genomes_project 7 129656906 129672218 + MGP_129S1SvImJ_P0086371 Kdm8 protein_coding protein_coding MGP_129S1SvImJ_T0086369.1 MGP_129S1SvImJ_G0032965.1 mouse_genomes_project 7 128151987 128592724 + MGP_129S1SvImJ_P0086369 Hs3st4 protein_coding protein_coding MGP_129S1SvImJ_T0084321.1 MGP_129S1SvImJ_G0032354.1 mouse_genomes_project 7 67923152 67941852 + MGP_129S1SvImJ_P0084321 Lins1 protein_coding protein_coding MGP_129S1SvImJ_T0084322.1 MGP_129S1SvImJ_G0032354.1 mouse_genomes_project 7 67923157 67948242 + MGP_129S1SvImJ_P0084322 Lins1 protein_coding protein_coding MGP_129S1SvImJ_T0084323.1 MGP_129S1SvImJ_G0032354.1 mouse_genomes_project 7 67923163 67941716 + MGP_129S1SvImJ_P0084323 Lins1 protein_coding protein_coding MGP_129S1SvImJ_T0084324.1 MGP_129S1SvImJ_G0032354.1 mouse_genomes_project 7 67923212 67943397 + Lins1 protein_coding retained_intron MGP_129S1SvImJ_T0084325.1 MGP_129S1SvImJ_G0032354.1 mouse_genomes_project 7 67923221 67948239 + MGP_129S1SvImJ_P0084325 Lins1 protein_coding protein_coding MGP_129S1SvImJ_T0084326.1 MGP_129S1SvImJ_G0032354.1 mouse_genomes_project 7 67923221 67950751 + MGP_129S1SvImJ_P0084326 Lins1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084327.1 MGP_129S1SvImJ_G0032354.1 mouse_genomes_project 7 67923234 67948242 + MGP_129S1SvImJ_P0084327 Lins1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084328.1 MGP_129S1SvImJ_G0032354.1 mouse_genomes_project 7 67941524 67948182 + MGP_129S1SvImJ_P0084328 Lins1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084329.1 MGP_129S1SvImJ_G0032354.1 mouse_genomes_project 7 67941672 67943870 + MGP_129S1SvImJ_P0084329 Lins1 protein_coding protein_coding MGP_129S1SvImJ_T0084330.1 MGP_129S1SvImJ_G0032354.1 mouse_genomes_project 7 67941817 67944059 + MGP_129S1SvImJ_P0084330 Lins1 protein_coding protein_coding MGP_129S1SvImJ_T0084331.1 MGP_129S1SvImJ_G0032354.1 mouse_genomes_project 7 67942903 67947345 + MGP_129S1SvImJ_P0084331 Lins1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084332.1 MGP_129S1SvImJ_G0032354.1 mouse_genomes_project 7 67943640 67950749 + Lins1 protein_coding retained_intron MGP_129S1SvImJ_T0008897.1 MGP_129S1SvImJ_G0007186.1 mouse_genomes_project 7 67298663 67299235 - Gm45081 lincRNA lincRNA MGP_129S1SvImJ_T0015701.1 MGP_129S1SvImJ_G0013790.1 mouse_genomes_project 7 1221758 1222123 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084233.1 MGP_129S1SvImJ_G0032335.1 mouse_genomes_project 7 65423688 65439149 + Mtmr10 protein_coding retained_intron MGP_129S1SvImJ_T0084234.1 MGP_129S1SvImJ_G0032335.1 mouse_genomes_project 7 65423705 65478805 + MGP_129S1SvImJ_P0084234 Mtmr10 protein_coding protein_coding MGP_129S1SvImJ_T0084235.1 MGP_129S1SvImJ_G0032335.1 mouse_genomes_project 7 65423817 65476028 + MGP_129S1SvImJ_P0084235 Mtmr10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084236.1 MGP_129S1SvImJ_G0032335.1 mouse_genomes_project 7 65436608 65457207 + MGP_129S1SvImJ_P0084236 Mtmr10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0015908.1 MGP_129S1SvImJ_G0013997.1 mouse_genomes_project 7 125250660 125251402 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009071.1 MGP_129S1SvImJ_G0007296.1 mouse_genomes_project 7 150271162 150274064 - Gm26793 lincRNA lincRNA MGP_129S1SvImJ_T0083183.1 MGP_129S1SvImJ_G0032065.1 mouse_genomes_project 7 30463077 30469182 - MGP_129S1SvImJ_P0083183 Scgb2b3 protein_coding protein_coding MGP_129S1SvImJ_T0010944.1 MGP_129S1SvImJ_G0009060.1 mouse_genomes_project 7 132078514 132078590 + Mir762 miRNA miRNA MGP_129S1SvImJ_T0085470.1 MGP_129S1SvImJ_G0032641.1 mouse_genomes_project 7 106206809 106207763 - MGP_129S1SvImJ_P0085470 Olfr586 protein_coding protein_coding MGP_129S1SvImJ_T0101350.1 MGP_129S1SvImJ_G0039417.1 mouse_genomes_project 7 122713120 122713234 + Gm26147 snoRNA snoRNA MGP_129S1SvImJ_T0086337.1 MGP_129S1SvImJ_G0032960.1 mouse_genomes_project 7 127356483 127409434 + MGP_129S1SvImJ_P0086337 Slc5a11 protein_coding protein_coding MGP_129S1SvImJ_T0086338.1 MGP_129S1SvImJ_G0032960.1 mouse_genomes_project 7 127356514 127371937 + Slc5a11 protein_coding processed_transcript MGP_129S1SvImJ_T0086339.1 MGP_129S1SvImJ_G0032960.1 mouse_genomes_project 7 127356516 127416823 + MGP_129S1SvImJ_P0086339 Slc5a11 protein_coding protein_coding MGP_129S1SvImJ_T0086340.1 MGP_129S1SvImJ_G0032960.1 mouse_genomes_project 7 127371836 127382367 + MGP_129S1SvImJ_P0086340 Slc5a11 protein_coding protein_coding MGP_129S1SvImJ_T0086341.1 MGP_129S1SvImJ_G0032960.1 mouse_genomes_project 7 127371836 127390945 + MGP_129S1SvImJ_P0086341 Slc5a11 protein_coding protein_coding MGP_129S1SvImJ_T0086342.1 MGP_129S1SvImJ_G0032960.1 mouse_genomes_project 7 127378560 127416773 + MGP_129S1SvImJ_P0086342 Slc5a11 protein_coding protein_coding MGP_129S1SvImJ_T0086343.1 MGP_129S1SvImJ_G0032960.1 mouse_genomes_project 7 127383263 127393851 + MGP_129S1SvImJ_P0086343 Slc5a11 protein_coding protein_coding MGP_129S1SvImJ_T0086344.1 MGP_129S1SvImJ_G0032960.1 mouse_genomes_project 7 127408942 127411555 + Slc5a11 protein_coding processed_transcript MGP_129S1SvImJ_T0081242.1 MGP_129S1SvImJ_G0031529.1 mouse_genomes_project 7 622154 624103 + MGP_129S1SvImJ_P0081242 Tsen34 protein_coding protein_coding MGP_129S1SvImJ_T0081243.1 MGP_129S1SvImJ_G0031529.1 mouse_genomes_project 7 622666 630346 + MGP_129S1SvImJ_P0081243 Tsen34 protein_coding protein_coding MGP_129S1SvImJ_T0081244.1 MGP_129S1SvImJ_G0031529.1 mouse_genomes_project 7 622893 624483 + MGP_129S1SvImJ_P0081244 Tsen34 protein_coding protein_coding MGP_129S1SvImJ_T0081245.1 MGP_129S1SvImJ_G0031529.1 mouse_genomes_project 7 623054 630100 + MGP_129S1SvImJ_P0081245 Tsen34 protein_coding protein_coding MGP_129S1SvImJ_T0081246.1 MGP_129S1SvImJ_G0031529.1 mouse_genomes_project 7 623056 630334 + MGP_129S1SvImJ_P0081246 Tsen34 protein_coding protein_coding MGP_129S1SvImJ_T0081247.1 MGP_129S1SvImJ_G0031529.1 mouse_genomes_project 7 623092 624922 + Tsen34 protein_coding retained_intron MGP_129S1SvImJ_T0081248.1 MGP_129S1SvImJ_G0031529.1 mouse_genomes_project 7 623100 630326 + MGP_129S1SvImJ_P0081248 Tsen34 protein_coding protein_coding MGP_129S1SvImJ_T0081249.1 MGP_129S1SvImJ_G0031529.1 mouse_genomes_project 7 623120 624506 + MGP_129S1SvImJ_P0081249 Tsen34 protein_coding protein_coding MGP_129S1SvImJ_T0081250.1 MGP_129S1SvImJ_G0031529.1 mouse_genomes_project 7 623589 624390 + MGP_129S1SvImJ_P0081250 Tsen34 protein_coding protein_coding MGP_129S1SvImJ_T0081251.1 MGP_129S1SvImJ_G0031529.1 mouse_genomes_project 7 623804 629745 + MGP_129S1SvImJ_P0081251 Tsen34 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081252.1 MGP_129S1SvImJ_G0031529.1 mouse_genomes_project 7 623819 630326 + MGP_129S1SvImJ_P0081252 Tsen34 protein_coding protein_coding MGP_129S1SvImJ_T0081253.1 MGP_129S1SvImJ_G0031529.1 mouse_genomes_project 7 624485 629745 + MGP_129S1SvImJ_P0081253 Tsen34 protein_coding protein_coding MGP_129S1SvImJ_T0086706.1 MGP_129S1SvImJ_G0033020.1 mouse_genomes_project 7 131410811 131413439 + MGP_129S1SvImJ_P0086706 AI467606 protein_coding protein_coding MGP_129S1SvImJ_T0086707.1 MGP_129S1SvImJ_G0033020.1 mouse_genomes_project 7 131410876 131412446 + MGP_129S1SvImJ_P0086707 AI467606 protein_coding protein_coding MGP_129S1SvImJ_T0102720.1 MGP_129S1SvImJ_G0040552.1 mouse_genomes_project 7 25317627 25325832 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102684.1 MGP_129S1SvImJ_G0040517.1 mouse_genomes_project 7 9473047 9474562 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0010887.1 MGP_129S1SvImJ_G0009003.1 mouse_genomes_project 7 45239873 45239935 - Mir7054 miRNA miRNA MGP_129S1SvImJ_T0083715.1 MGP_129S1SvImJ_G0032196.1 mouse_genomes_project 7 45280718 45288752 - MGP_129S1SvImJ_P0083715 Prrg2 protein_coding protein_coding MGP_129S1SvImJ_T0085766.1 MGP_129S1SvImJ_G0032809.1 mouse_genomes_project 7 111440229 111441168 + MGP_129S1SvImJ_P0085766 Olfr481 protein_coding protein_coding MGP_129S1SvImJ_T0081530.1 MGP_129S1SvImJ_G0031609.1 mouse_genomes_project 7 3582542 3584302 - MGP_129S1SvImJ_P0081530 protein_coding protein_coding MGP_129S1SvImJ_T0083405.1 MGP_129S1SvImJ_G0032111.1 mouse_genomes_project 7 41407316 41429687 + MGP_129S1SvImJ_P0083405 Zfp788 protein_coding protein_coding MGP_129S1SvImJ_T0083406.1 MGP_129S1SvImJ_G0032111.1 mouse_genomes_project 7 41407644 41433017 + MGP_129S1SvImJ_P0083406 Zfp788 protein_coding protein_coding MGP_129S1SvImJ_T0083407.1 MGP_129S1SvImJ_G0032111.1 mouse_genomes_project 7 41407669 41430497 + MGP_129S1SvImJ_P0083407 Zfp788 protein_coding protein_coding MGP_129S1SvImJ_T0083408.1 MGP_129S1SvImJ_G0032111.1 mouse_genomes_project 7 41407671 41431136 + MGP_129S1SvImJ_P0083408 Zfp788 protein_coding protein_coding MGP_129S1SvImJ_T0083409.1 MGP_129S1SvImJ_G0032111.1 mouse_genomes_project 7 41407677 41433070 + MGP_129S1SvImJ_P0083409 Zfp788 protein_coding protein_coding MGP_129S1SvImJ_T0083410.1 MGP_129S1SvImJ_G0032111.1 mouse_genomes_project 7 41407690 41433662 + MGP_129S1SvImJ_P0083410 Zfp788 protein_coding protein_coding MGP_129S1SvImJ_T0083411.1 MGP_129S1SvImJ_G0032111.1 mouse_genomes_project 7 41429722 41432735 + MGP_129S1SvImJ_P0083411 Zfp788 protein_coding protein_coding MGP_129S1SvImJ_T0082309.1 MGP_129S1SvImJ_G0031861.1 mouse_genomes_project 7 23756310 23759033 + MGP_129S1SvImJ_P0082309 Prr19 protein_coding protein_coding MGP_129S1SvImJ_T0081444.1 MGP_129S1SvImJ_G0031567.1 mouse_genomes_project 7 1827172 1848269 + MGP_129S1SvImJ_P0081444 Isoc2a protein_coding protein_coding MGP_129S1SvImJ_T0083435.1 MGP_129S1SvImJ_G0032119.1 mouse_genomes_project 7 43417870 43431656 + MGP_129S1SvImJ_P0083435 Siglecg protein_coding protein_coding MGP_129S1SvImJ_T0083436.1 MGP_129S1SvImJ_G0032119.1 mouse_genomes_project 7 43417905 43431656 + Siglecg protein_coding retained_intron MGP_129S1SvImJ_T0083437.1 MGP_129S1SvImJ_G0032119.1 mouse_genomes_project 7 43417934 43431656 + Siglecg protein_coding retained_intron MGP_129S1SvImJ_T0083438.1 MGP_129S1SvImJ_G0032119.1 mouse_genomes_project 7 43418139 43426305 + Siglecg protein_coding retained_intron MGP_129S1SvImJ_T0081806.1 MGP_129S1SvImJ_G0031718.1 mouse_genomes_project 7 14566285 14591604 + MGP_129S1SvImJ_P0081806 Strn4 protein_coding protein_coding MGP_129S1SvImJ_T0081807.1 MGP_129S1SvImJ_G0031718.1 mouse_genomes_project 7 14566714 14591600 + MGP_129S1SvImJ_P0081807 Strn4 protein_coding protein_coding MGP_129S1SvImJ_T0081808.1 MGP_129S1SvImJ_G0031718.1 mouse_genomes_project 7 14566775 14579205 + MGP_129S1SvImJ_P0081808 Strn4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081809.1 MGP_129S1SvImJ_G0031718.1 mouse_genomes_project 7 14572446 14574586 + Strn4 protein_coding processed_transcript MGP_129S1SvImJ_T0081810.1 MGP_129S1SvImJ_G0031718.1 mouse_genomes_project 7 14573475 14584400 + MGP_129S1SvImJ_P0081810 Strn4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081811.1 MGP_129S1SvImJ_G0031718.1 mouse_genomes_project 7 14574462 14579142 + Strn4 protein_coding retained_intron MGP_129S1SvImJ_T0081812.1 MGP_129S1SvImJ_G0031718.1 mouse_genomes_project 7 14579169 14582030 + Strn4 protein_coding retained_intron MGP_129S1SvImJ_T0081813.1 MGP_129S1SvImJ_G0031718.1 mouse_genomes_project 7 14580537 14581900 + Strn4 protein_coding processed_transcript MGP_129S1SvImJ_T0081814.1 MGP_129S1SvImJ_G0031718.1 mouse_genomes_project 7 14581489 14588660 + MGP_129S1SvImJ_P0081814 Strn4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081815.1 MGP_129S1SvImJ_G0031718.1 mouse_genomes_project 7 14583039 14584416 + Strn4 protein_coding retained_intron MGP_129S1SvImJ_T0081816.1 MGP_129S1SvImJ_G0031718.1 mouse_genomes_project 7 14583590 14585081 + Strn4 protein_coding retained_intron MGP_129S1SvImJ_T0081817.1 MGP_129S1SvImJ_G0031718.1 mouse_genomes_project 7 14586884 14591604 + Strn4 protein_coding retained_intron MGP_129S1SvImJ_T0081818.1 MGP_129S1SvImJ_G0031718.1 mouse_genomes_project 7 14588312 14590909 + MGP_129S1SvImJ_P0081818 Strn4 protein_coding protein_coding MGP_129S1SvImJ_T0081819.1 MGP_129S1SvImJ_G0031718.1 mouse_genomes_project 7 14589232 14590691 + Strn4 protein_coding retained_intron MGP_129S1SvImJ_T0086811.1 MGP_129S1SvImJ_G0033044.1 mouse_genomes_project 7 131933054 131938176 + Phkg2 protein_coding retained_intron MGP_129S1SvImJ_T0086812.1 MGP_129S1SvImJ_G0033044.1 mouse_genomes_project 7 131933094 131944680 + MGP_129S1SvImJ_P0086812 Phkg2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086813.1 MGP_129S1SvImJ_G0033044.1 mouse_genomes_project 7 131933116 131944680 + MGP_129S1SvImJ_P0086813 Phkg2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086814.1 MGP_129S1SvImJ_G0033044.1 mouse_genomes_project 7 131933118 131941519 + Phkg2 protein_coding retained_intron MGP_129S1SvImJ_T0086815.1 MGP_129S1SvImJ_G0033044.1 mouse_genomes_project 7 131933118 131945540 + MGP_129S1SvImJ_P0086815 Phkg2 protein_coding protein_coding MGP_129S1SvImJ_T0086816.1 MGP_129S1SvImJ_G0033044.1 mouse_genomes_project 7 131933135 131945538 + MGP_129S1SvImJ_P0086816 Phkg2 protein_coding protein_coding MGP_129S1SvImJ_T0086817.1 MGP_129S1SvImJ_G0033044.1 mouse_genomes_project 7 131933137 131945538 + MGP_129S1SvImJ_P0086817 Phkg2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086818.1 MGP_129S1SvImJ_G0033044.1 mouse_genomes_project 7 131933196 131944631 + Phkg2 protein_coding retained_intron MGP_129S1SvImJ_T0086819.1 MGP_129S1SvImJ_G0033044.1 mouse_genomes_project 7 131937529 131945533 + MGP_129S1SvImJ_P0086819 Phkg2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086820.1 MGP_129S1SvImJ_G0033044.1 mouse_genomes_project 7 131941512 131944652 + Phkg2 protein_coding retained_intron MGP_129S1SvImJ_T0086821.1 MGP_129S1SvImJ_G0033044.1 mouse_genomes_project 7 131944328 131944919 + Phkg2 protein_coding retained_intron MGP_129S1SvImJ_T0084935.1 MGP_129S1SvImJ_G0032503.1 mouse_genomes_project 7 92541488 92623115 + MGP_129S1SvImJ_P0084935 Picalm protein_coding protein_coding MGP_129S1SvImJ_T0084936.1 MGP_129S1SvImJ_G0032503.1 mouse_genomes_project 7 92541811 92620051 + MGP_129S1SvImJ_P0084936 Picalm protein_coding unknown_likely_coding MGP_129S1SvImJ_T0010934.1 MGP_129S1SvImJ_G0009050.1 mouse_genomes_project 7 114307076 114307183 + miRNA miRNA MGP_129S1SvImJ_T0018369.1 MGP_129S1SvImJ_G0015658.1 mouse_genomes_project 7 26083677 26084911 + Gm44924 processed_transcript processed_transcript MGP_129S1SvImJ_T0015877.1 MGP_129S1SvImJ_G0013966.1 mouse_genomes_project 7 100298910 100299620 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008882.1 MGP_129S1SvImJ_G0007175.1 mouse_genomes_project 7 52506143 52528604 - Gm29296 lincRNA lincRNA MGP_129S1SvImJ_T0098764.1 MGP_129S1SvImJ_G0036849.1 mouse_genomes_project 7 83595494 83595621 + Mir1839 scaRNA scaRNA MGP_129S1SvImJ_T0100073.1 MGP_129S1SvImJ_G0038140.1 mouse_genomes_project 7 98064008 98064115 - Gm25684 snRNA snRNA MGP_129S1SvImJ_T0084393.1 MGP_129S1SvImJ_G0032368.1 mouse_genomes_project 7 74927993 74973760 + MGP_129S1SvImJ_P0084393 Rgma protein_coding protein_coding MGP_129S1SvImJ_T0084394.1 MGP_129S1SvImJ_G0032368.1 mouse_genomes_project 7 74943279 74965244 + MGP_129S1SvImJ_P0084394 Rgma protein_coding protein_coding MGP_129S1SvImJ_T0084395.1 MGP_129S1SvImJ_G0032368.1 mouse_genomes_project 7 74943436 74945408 + Rgma protein_coding retained_intron MGP_129S1SvImJ_T0081685.1 MGP_129S1SvImJ_G0031677.1 mouse_genomes_project 7 11018053 11075029 + MGP_129S1SvImJ_P0081685 protein_coding protein_coding MGP_129S1SvImJ_T0084606.1 MGP_129S1SvImJ_G0032408.1 mouse_genomes_project 7 82239258 82261142 + MGP_129S1SvImJ_P0084606 Vps33b protein_coding protein_coding MGP_129S1SvImJ_T0084607.1 MGP_129S1SvImJ_G0032408.1 mouse_genomes_project 7 82239288 82261140 + MGP_129S1SvImJ_P0084607 Vps33b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084608.1 MGP_129S1SvImJ_G0032408.1 mouse_genomes_project 7 82239343 82255314 + Vps33b protein_coding retained_intron MGP_129S1SvImJ_T0084609.1 MGP_129S1SvImJ_G0032408.1 mouse_genomes_project 7 82239349 82261138 + MGP_129S1SvImJ_P0084609 Vps33b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084610.1 MGP_129S1SvImJ_G0032408.1 mouse_genomes_project 7 82243925 82253639 + Vps33b protein_coding processed_transcript MGP_129S1SvImJ_T0084611.1 MGP_129S1SvImJ_G0032408.1 mouse_genomes_project 7 82259594 82261317 + MGP_129S1SvImJ_P0084611 Vps33b protein_coding protein_coding MGP_129S1SvImJ_T0084612.1 MGP_129S1SvImJ_G0032408.1 mouse_genomes_project 7 82259642 82260465 + Vps33b protein_coding retained_intron MGP_129S1SvImJ_T0082356.1 MGP_129S1SvImJ_G0031874.1 mouse_genomes_project 7 24175775 24181790 - MGP_129S1SvImJ_P0082356 Tmem91 protein_coding protein_coding MGP_129S1SvImJ_T0082357.1 MGP_129S1SvImJ_G0031874.1 mouse_genomes_project 7 24175778 24180097 - MGP_129S1SvImJ_P0082357 Tmem91 protein_coding protein_coding MGP_129S1SvImJ_T0082358.1 MGP_129S1SvImJ_G0031874.1 mouse_genomes_project 7 24175878 24181714 - MGP_129S1SvImJ_P0082358 Tmem91 protein_coding protein_coding MGP_129S1SvImJ_T0082359.1 MGP_129S1SvImJ_G0031874.1 mouse_genomes_project 7 24175878 24181671 - MGP_129S1SvImJ_P0082359 Tmem91 protein_coding protein_coding MGP_129S1SvImJ_T0082360.1 MGP_129S1SvImJ_G0031874.1 mouse_genomes_project 7 24176680 24181743 - Tmem91 protein_coding retained_intron MGP_129S1SvImJ_T0082361.1 MGP_129S1SvImJ_G0031874.1 mouse_genomes_project 7 24177820 24181742 - Tmem91 protein_coding retained_intron MGP_129S1SvImJ_T0102764.1 MGP_129S1SvImJ_G0040596.1 mouse_genomes_project 7 48923856 48924436 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002278.1 MGP_129S1SvImJ_G0002190.1 mouse_genomes_project 7 75316820 75319916 - TEC TEC MGP_129S1SvImJ_T0002279.1 MGP_129S1SvImJ_G0002190.1 mouse_genomes_project 7 75317784 75319809 - TEC TEC MGP_129S1SvImJ_T0085613.1 MGP_129S1SvImJ_G0032750.1 mouse_genomes_project 7 108619107 108622297 + MGP_129S1SvImJ_P0085613 Gm5901 protein_coding protein_coding MGP_129S1SvImJ_T0084573.1 MGP_129S1SvImJ_G0032399.1 mouse_genomes_project 7 81789860 81837811 - MGP_129S1SvImJ_P0084573 Ap3s2 protein_coding protein_coding MGP_129S1SvImJ_T0084574.1 MGP_129S1SvImJ_G0032399.1 mouse_genomes_project 7 81797043 81837758 - MGP_129S1SvImJ_P0084574 Ap3s2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0002274.1 MGP_129S1SvImJ_G0002186.1 mouse_genomes_project 7 74977976 74979624 + TEC TEC MGP_129S1SvImJ_T0082384.1 MGP_129S1SvImJ_G0031879.1 mouse_genomes_project 7 24268748 24302382 - MGP_129S1SvImJ_P0082384 Axl protein_coding protein_coding MGP_129S1SvImJ_T0082385.1 MGP_129S1SvImJ_G0031879.1 mouse_genomes_project 7 24269105 24302400 - MGP_129S1SvImJ_P0082385 Axl protein_coding protein_coding MGP_129S1SvImJ_T0082386.1 MGP_129S1SvImJ_G0031879.1 mouse_genomes_project 7 24272147 24275532 - Axl protein_coding retained_intron MGP_129S1SvImJ_T0082387.1 MGP_129S1SvImJ_G0031879.1 mouse_genomes_project 7 24272838 24275881 - Axl protein_coding retained_intron MGP_129S1SvImJ_T0082388.1 MGP_129S1SvImJ_G0031879.1 mouse_genomes_project 7 24275261 24302395 - Axl protein_coding retained_intron MGP_129S1SvImJ_T0082389.1 MGP_129S1SvImJ_G0031879.1 mouse_genomes_project 7 24277932 24286093 - MGP_129S1SvImJ_P0082389 Axl protein_coding protein_coding MGP_129S1SvImJ_T0082390.1 MGP_129S1SvImJ_G0031879.1 mouse_genomes_project 7 24290179 24299032 - Axl protein_coding retained_intron MGP_129S1SvImJ_T0082391.1 MGP_129S1SvImJ_G0031879.1 mouse_genomes_project 7 24297905 24299538 - Axl protein_coding retained_intron MGP_129S1SvImJ_T0002315.1 MGP_129S1SvImJ_G0002226.1 mouse_genomes_project 7 125288075 125288707 - TEC TEC MGP_129S1SvImJ_T0085473.1 MGP_129S1SvImJ_G0032644.1 mouse_genomes_project 7 106267725 106270466 + MGP_129S1SvImJ_P0085473 Olfr592 protein_coding protein_coding MGP_129S1SvImJ_T0085474.1 MGP_129S1SvImJ_G0032644.1 mouse_genomes_project 7 106269527 106270466 + MGP_129S1SvImJ_P0085474 Olfr592 protein_coding protein_coding MGP_129S1SvImJ_T0081871.1 MGP_129S1SvImJ_G0031737.1 mouse_genomes_project 7 15985844 15991259 + MGP_129S1SvImJ_P0081871 Igfl3 protein_coding protein_coding MGP_129S1SvImJ_T0084862.1 MGP_129S1SvImJ_G0032466.1 mouse_genomes_project 7 87715083 87726162 - MGP_129S1SvImJ_P0084862 Vmn2r70 protein_coding protein_coding MGP_129S1SvImJ_T0084333.1 MGP_129S1SvImJ_G0032355.1 mouse_genomes_project 7 67977179 68061973 + MGP_129S1SvImJ_P0084333 Cers3 protein_coding protein_coding MGP_129S1SvImJ_T0086806.1 MGP_129S1SvImJ_G0033042.1 mouse_genomes_project 7 131873503 131926771 + MGP_129S1SvImJ_P0086806 Gm42715 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086808.1 MGP_129S1SvImJ_G0033042.1 mouse_genomes_project 7 131919111 131922921 + MGP_129S1SvImJ_P0086808 Gm42715 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0015760.1 MGP_129S1SvImJ_G0013849.1 mouse_genomes_project 7 24484306 24484475 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085762.1 MGP_129S1SvImJ_G0032805.1 mouse_genomes_project 7 111357637 111358654 + MGP_129S1SvImJ_P0085762 Olfr477 protein_coding protein_coding MGP_129S1SvImJ_T0081639.1 MGP_129S1SvImJ_G0031663.1 mouse_genomes_project 7 10440653 10443387 - MGP_129S1SvImJ_P0081639 Chmp2a protein_coding protein_coding MGP_129S1SvImJ_T0082343.1 MGP_129S1SvImJ_G0031871.1 mouse_genomes_project 7 24127112 24128884 + MGP_129S1SvImJ_P0082343 B3gnt8 protein_coding protein_coding MGP_129S1SvImJ_T0082344.1 MGP_129S1SvImJ_G0031871.1 mouse_genomes_project 7 24128095 24135559 + MGP_129S1SvImJ_P0082344 B3gnt8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082345.1 MGP_129S1SvImJ_G0031871.1 mouse_genomes_project 7 24128096 24129951 + MGP_129S1SvImJ_P0082345 B3gnt8 protein_coding protein_coding MGP_129S1SvImJ_T0082346.1 MGP_129S1SvImJ_G0031871.1 mouse_genomes_project 7 24128100 24129944 + B3gnt8 protein_coding retained_intron MGP_129S1SvImJ_T0015709.1 MGP_129S1SvImJ_G0013798.1 mouse_genomes_project 7 2934335 2934467 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085797.1 MGP_129S1SvImJ_G0032837.1 mouse_genomes_project 7 112414725 112433661 + MGP_129S1SvImJ_P0085797 Tub protein_coding protein_coding MGP_129S1SvImJ_T0085798.1 MGP_129S1SvImJ_G0032837.1 mouse_genomes_project 7 112430627 112432764 + Tub protein_coding retained_intron MGP_129S1SvImJ_T0081724.1 MGP_129S1SvImJ_G0031697.1 mouse_genomes_project 7 13726284 13750688 + MGP_129S1SvImJ_P0081724 Zfp541 protein_coding protein_coding MGP_129S1SvImJ_T0081314.1 MGP_129S1SvImJ_G0031541.1 mouse_genomes_project 7 1160515 1166204 + MGP_129S1SvImJ_P0081314 Lilra5 protein_coding protein_coding MGP_129S1SvImJ_T0086708.1 MGP_129S1SvImJ_G0033021.1 mouse_genomes_project 7 131426571 131442724 - MGP_129S1SvImJ_P0086708 Qprt protein_coding protein_coding MGP_129S1SvImJ_T0086709.1 MGP_129S1SvImJ_G0033021.1 mouse_genomes_project 7 131428452 131442539 - Qprt protein_coding processed_transcript MGP_129S1SvImJ_T0086710.1 MGP_129S1SvImJ_G0033021.1 mouse_genomes_project 7 131436287 131442516 - Qprt protein_coding processed_transcript MGP_129S1SvImJ_T0015762.1 MGP_129S1SvImJ_G0013851.1 mouse_genomes_project 7 25401407 25403118 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084197.1 MGP_129S1SvImJ_G0032328.1 mouse_genomes_project 7 63500784 63503331 - MGP_129S1SvImJ_P0084197 Mkrn3 protein_coding protein_coding MGP_129S1SvImJ_T0082589.1 MGP_129S1SvImJ_G0031934.1 mouse_genomes_project 7 27040381 27041773 + MGP_129S1SvImJ_P0082589 Eid2 protein_coding protein_coding MGP_129S1SvImJ_T0010947.1 MGP_129S1SvImJ_G0009063.1 mouse_genomes_project 7 135468689 135468757 + Mir7061 miRNA miRNA MGP_129S1SvImJ_T0087414.1 MGP_129S1SvImJ_G0033189.1 mouse_genomes_project 7 145889981 145903301 + MGP_129S1SvImJ_P0087414 Cyp2e1 protein_coding protein_coding MGP_129S1SvImJ_T0085485.1 MGP_129S1SvImJ_G0032654.1 mouse_genomes_project 7 106453459 106454404 - MGP_129S1SvImJ_P0085485 Olfr600 protein_coding protein_coding MGP_129S1SvImJ_T0087165.1 MGP_129S1SvImJ_G0033115.1 mouse_genomes_project 7 137416600 137484701 - MGP_129S1SvImJ_P0087165 Fam53b protein_coding protein_coding MGP_129S1SvImJ_T0087166.1 MGP_129S1SvImJ_G0033115.1 mouse_genomes_project 7 137464032 137519835 - MGP_129S1SvImJ_P0087166 Fam53b protein_coding protein_coding MGP_129S1SvImJ_T0087167.1 MGP_129S1SvImJ_G0033115.1 mouse_genomes_project 7 137464032 137491698 - MGP_129S1SvImJ_P0087167 Fam53b protein_coding protein_coding MGP_129S1SvImJ_T0087168.1 MGP_129S1SvImJ_G0033115.1 mouse_genomes_project 7 137464867 137520469 - MGP_129S1SvImJ_P0087168 Fam53b protein_coding protein_coding MGP_129S1SvImJ_T0087169.1 MGP_129S1SvImJ_G0033115.1 mouse_genomes_project 7 137483892 137513141 - MGP_129S1SvImJ_P0087169 Fam53b protein_coding protein_coding MGP_129S1SvImJ_T0087170.1 MGP_129S1SvImJ_G0033115.1 mouse_genomes_project 7 137484003 137485080 - Fam53b protein_coding processed_transcript MGP_129S1SvImJ_T0087171.1 MGP_129S1SvImJ_G0033115.1 mouse_genomes_project 7 137484062 137508511 - Fam53b protein_coding processed_transcript MGP_129S1SvImJ_T0010912.1 MGP_129S1SvImJ_G0009028.1 mouse_genomes_project 7 63052252 63052323 - Mir344g miRNA miRNA MGP_129S1SvImJ_T0015931.1 MGP_129S1SvImJ_G0014020.1 mouse_genomes_project 7 133123913 133124197 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002267.1 MGP_129S1SvImJ_G0002179.1 mouse_genomes_project 7 65419835 65420436 + TEC TEC MGP_129S1SvImJ_T0008927.1 MGP_129S1SvImJ_G0007209.1 mouse_genomes_project 7 75197741 75198476 - Gm44738 lincRNA lincRNA MGP_129S1SvImJ_T0084934.1 MGP_129S1SvImJ_G0032502.1 mouse_genomes_project 7 92382473 92383573 + MGP_129S1SvImJ_P0084934 protein_coding protein_coding MGP_129S1SvImJ_T0087428.1 MGP_129S1SvImJ_G0033196.1 mouse_genomes_project 7 145994347 146000902 + MGP_129S1SvImJ_P0087428 Ric8a protein_coding protein_coding MGP_129S1SvImJ_T0087429.1 MGP_129S1SvImJ_G0033196.1 mouse_genomes_project 7 145994486 145995514 + Ric8a protein_coding retained_intron MGP_129S1SvImJ_T0087430.1 MGP_129S1SvImJ_G0033196.1 mouse_genomes_project 7 145994593 145995730 + Ric8a protein_coding processed_transcript MGP_129S1SvImJ_T0087431.1 MGP_129S1SvImJ_G0033196.1 mouse_genomes_project 7 145994613 145995714 + Ric8a protein_coding processed_transcript MGP_129S1SvImJ_T0087432.1 MGP_129S1SvImJ_G0033196.1 mouse_genomes_project 7 145994870 146000131 + Ric8a protein_coding retained_intron MGP_129S1SvImJ_T0087433.1 MGP_129S1SvImJ_G0033196.1 mouse_genomes_project 7 145995333 145996906 + Ric8a protein_coding processed_transcript MGP_129S1SvImJ_T0087434.1 MGP_129S1SvImJ_G0033196.1 mouse_genomes_project 7 145997813 146000315 + Ric8a protein_coding retained_intron MGP_129S1SvImJ_T0087435.1 MGP_129S1SvImJ_G0033196.1 mouse_genomes_project 7 145998344 145999791 + Ric8a protein_coding retained_intron MGP_129S1SvImJ_T0011723.1 MGP_129S1SvImJ_G0009839.1 mouse_genomes_project 7 148556936 148557055 + Gm27803 misc_RNA misc_RNA MGP_129S1SvImJ_T0081718.1 MGP_129S1SvImJ_G0031694.1 mouse_genomes_project 7 13582331 13590585 - MGP_129S1SvImJ_P0081718 Gltscr2 protein_coding protein_coding MGP_129S1SvImJ_T0081719.1 MGP_129S1SvImJ_G0031694.1 mouse_genomes_project 7 13582342 13590254 - Gltscr2 protein_coding retained_intron MGP_129S1SvImJ_T0081720.1 MGP_129S1SvImJ_G0031694.1 mouse_genomes_project 7 13587351 13590559 - Gltscr2 protein_coding processed_transcript MGP_129S1SvImJ_T0081577.1 MGP_129S1SvImJ_G0031643.1 mouse_genomes_project 7 9710218 9711214 - MGP_129S1SvImJ_P0081577 Vmn1r83 protein_coding protein_coding MGP_129S1SvImJ_T0083396.1 MGP_129S1SvImJ_G0032109.1 mouse_genomes_project 7 41278606 41297068 - MGP_129S1SvImJ_P0083396 Gm6871 protein_coding protein_coding MGP_129S1SvImJ_T0083397.1 MGP_129S1SvImJ_G0032109.1 mouse_genomes_project 7 41278638 41311134 - MGP_129S1SvImJ_P0083397 Gm6871 protein_coding protein_coding MGP_129S1SvImJ_T0083398.1 MGP_129S1SvImJ_G0032109.1 mouse_genomes_project 7 41279376 41297034 - MGP_129S1SvImJ_P0083398 Gm6871 protein_coding protein_coding MGP_129S1SvImJ_T0083399.1 MGP_129S1SvImJ_G0032109.1 mouse_genomes_project 7 41298339 41311134 - MGP_129S1SvImJ_P0083399 Gm6871 protein_coding protein_coding MGP_129S1SvImJ_T0010928.1 MGP_129S1SvImJ_G0009044.1 mouse_genomes_project 7 98982557 98982656 + Mir6394 miRNA miRNA MGP_129S1SvImJ_T0083737.1 MGP_129S1SvImJ_G0032207.1 mouse_genomes_project 7 45417707 45418551 + MGP_129S1SvImJ_P0083737 Pth2 protein_coding protein_coding MGP_129S1SvImJ_T0087554.1 MGP_129S1SvImJ_G0033225.1 mouse_genomes_project 7 146523425 146549216 + MGP_129S1SvImJ_P0087554 Eps8l2 protein_coding protein_coding MGP_129S1SvImJ_T0087555.1 MGP_129S1SvImJ_G0033225.1 mouse_genomes_project 7 146523501 146549216 + Eps8l2 protein_coding retained_intron MGP_129S1SvImJ_T0087556.1 MGP_129S1SvImJ_G0033225.1 mouse_genomes_project 7 146523532 146539790 + Eps8l2 protein_coding processed_transcript MGP_129S1SvImJ_T0087557.1 MGP_129S1SvImJ_G0033225.1 mouse_genomes_project 7 146523549 146539788 + Eps8l2 protein_coding retained_intron MGP_129S1SvImJ_T0087558.1 MGP_129S1SvImJ_G0033225.1 mouse_genomes_project 7 146523551 146527536 + MGP_129S1SvImJ_P0087558 Eps8l2 protein_coding protein_coding MGP_129S1SvImJ_T0087559.1 MGP_129S1SvImJ_G0033225.1 mouse_genomes_project 7 146527201 146539925 + Eps8l2 protein_coding retained_intron MGP_129S1SvImJ_T0087560.1 MGP_129S1SvImJ_G0033225.1 mouse_genomes_project 7 146543095 146547611 + Eps8l2 protein_coding retained_intron MGP_129S1SvImJ_T0087561.1 MGP_129S1SvImJ_G0033225.1 mouse_genomes_project 7 146543302 146547930 + Eps8l2 protein_coding processed_transcript MGP_129S1SvImJ_T0087562.1 MGP_129S1SvImJ_G0033225.1 mouse_genomes_project 7 146546441 146547928 + Eps8l2 protein_coding processed_transcript MGP_129S1SvImJ_T0087563.1 MGP_129S1SvImJ_G0033225.1 mouse_genomes_project 7 146547732 146548863 + Eps8l2 protein_coding processed_transcript MGP_129S1SvImJ_T0011701.1 MGP_129S1SvImJ_G0009817.1 mouse_genomes_project 7 24396060 24396167 + Gm23921 misc_RNA misc_RNA MGP_129S1SvImJ_T0087470.1 MGP_129S1SvImJ_G0033205.1 mouse_genomes_project 7 146159753 146160938 - MGP_129S1SvImJ_P0087470 Ifitm3 protein_coding protein_coding MGP_129S1SvImJ_T0083394.1 MGP_129S1SvImJ_G0032108.1 mouse_genomes_project 7 41204520 41227629 - MGP_129S1SvImJ_P0083394 AW146154 protein_coding protein_coding MGP_129S1SvImJ_T0083395.1 MGP_129S1SvImJ_G0032108.1 mouse_genomes_project 7 41206936 41208071 - AW146154 protein_coding retained_intron MGP_129S1SvImJ_T0082605.1 MGP_129S1SvImJ_G0031940.1 mouse_genomes_project 7 27133386 27135431 + MGP_129S1SvImJ_P0082605 Rps16 protein_coding protein_coding MGP_129S1SvImJ_T0082606.1 MGP_129S1SvImJ_G0031940.1 mouse_genomes_project 7 27133497 27135431 + Rps16 protein_coding retained_intron MGP_129S1SvImJ_T0082607.1 MGP_129S1SvImJ_G0031940.1 mouse_genomes_project 7 27133658 27135431 + Rps16 protein_coding processed_transcript MGP_129S1SvImJ_T0015855.1 MGP_129S1SvImJ_G0013944.1 mouse_genomes_project 7 82917775 82918099 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0086950.1 MGP_129S1SvImJ_G0033068.1 mouse_genomes_project 7 132387365 132391518 - MGP_129S1SvImJ_P0086950 Pycard protein_coding protein_coding MGP_129S1SvImJ_T0086951.1 MGP_129S1SvImJ_G0033068.1 mouse_genomes_project 7 132389299 132391178 - MGP_129S1SvImJ_P0086951 Pycard protein_coding protein_coding MGP_129S1SvImJ_T0085955.1 MGP_129S1SvImJ_G0032873.1 mouse_genomes_project 7 116831210 116953793 + MGP_129S1SvImJ_P0085955 Arntl protein_coding protein_coding MGP_129S1SvImJ_T0087424.1 MGP_129S1SvImJ_G0033194.1 mouse_genomes_project 7 145982655 145985869 + MGP_129S1SvImJ_P0087424 Odf3 protein_coding protein_coding MGP_129S1SvImJ_T0087425.1 MGP_129S1SvImJ_G0033194.1 mouse_genomes_project 7 145982673 145985859 + MGP_129S1SvImJ_P0087425 Odf3 protein_coding protein_coding MGP_129S1SvImJ_T0087426.1 MGP_129S1SvImJ_G0033194.1 mouse_genomes_project 7 145982674 145985862 + Odf3 protein_coding retained_intron MGP_129S1SvImJ_T0087402.1 MGP_129S1SvImJ_G0033177.1 mouse_genomes_project 7 145506338 145507253 - MGP_129S1SvImJ_P0087402 Olfr531 protein_coding protein_coding MGP_129S1SvImJ_T0083961.1 MGP_129S1SvImJ_G0032262.1 mouse_genomes_project 7 46604288 46678526 + MGP_129S1SvImJ_P0083961 Otog protein_coding protein_coding MGP_129S1SvImJ_T0002239.1 MGP_129S1SvImJ_G0002151.1 mouse_genomes_project 7 37177124 37180384 - TEC TEC MGP_129S1SvImJ_T0085907.1 MGP_129S1SvImJ_G0032864.1 mouse_genomes_project 7 114585615 114586398 - Eif4g2 protein_coding processed_transcript MGP_129S1SvImJ_T0085908.1 MGP_129S1SvImJ_G0032864.1 mouse_genomes_project 7 114585838 114587508 - Eif4g2 protein_coding retained_intron MGP_129S1SvImJ_T0085909.1 MGP_129S1SvImJ_G0032864.1 mouse_genomes_project 7 114585938 114595567 - MGP_129S1SvImJ_P0085909 Eif4g2 protein_coding protein_coding MGP_129S1SvImJ_T0085910.1 MGP_129S1SvImJ_G0032864.1 mouse_genomes_project 7 114586646 114587496 - MGP_129S1SvImJ_P0085910 Eif4g2 protein_coding protein_coding MGP_129S1SvImJ_T0085911.1 MGP_129S1SvImJ_G0032864.1 mouse_genomes_project 7 114587384 114587946 - Eif4g2 protein_coding retained_intron MGP_129S1SvImJ_T0085912.1 MGP_129S1SvImJ_G0032864.1 mouse_genomes_project 7 114588119 114588632 - Eif4g2 protein_coding retained_intron MGP_129S1SvImJ_T0085913.1 MGP_129S1SvImJ_G0032864.1 mouse_genomes_project 7 114588458 114589456 - Eif4g2 protein_coding processed_transcript MGP_129S1SvImJ_T0085914.1 MGP_129S1SvImJ_G0032864.1 mouse_genomes_project 7 114589769 114590998 - Eif4g2 protein_coding retained_intron MGP_129S1SvImJ_T0085915.1 MGP_129S1SvImJ_G0032864.1 mouse_genomes_project 7 114591196 114592611 - Eif4g2 protein_coding retained_intron MGP_129S1SvImJ_T0085916.1 MGP_129S1SvImJ_G0032864.1 mouse_genomes_project 7 114591668 114596267 - MGP_129S1SvImJ_P0085916 Eif4g2 protein_coding protein_coding MGP_129S1SvImJ_T0085917.1 MGP_129S1SvImJ_G0032864.1 mouse_genomes_project 7 114592584 114595443 - MGP_129S1SvImJ_P0085917 Eif4g2 protein_coding protein_coding MGP_129S1SvImJ_T0085918.1 MGP_129S1SvImJ_G0032864.1 mouse_genomes_project 7 114593666 114596075 - Eif4g2 protein_coding retained_intron MGP_129S1SvImJ_T0085919.1 MGP_129S1SvImJ_G0032864.1 mouse_genomes_project 7 114594164 114595101 - MGP_129S1SvImJ_P0085919 Eif4g2 protein_coding protein_coding MGP_129S1SvImJ_T0015890.1 MGP_129S1SvImJ_G0013979.1 mouse_genomes_project 7 106223188 106223489 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102709.1 MGP_129S1SvImJ_G0040542.1 mouse_genomes_project 7 13272218 13272515 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0087398.1 MGP_129S1SvImJ_G0033173.1 mouse_genomes_project 7 145414680 145415730 + MGP_129S1SvImJ_P0087398 Olfr525 protein_coding protein_coding MGP_129S1SvImJ_T0085261.1 MGP_129S1SvImJ_G0032579.1 mouse_genomes_project 7 103861810 103894322 - MGP_129S1SvImJ_P0085261 P2ry6 protein_coding protein_coding MGP_129S1SvImJ_T0015940.1 MGP_129S1SvImJ_G0014029.1 mouse_genomes_project 7 144780928 144782818 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0083986.1 MGP_129S1SvImJ_G0032268.1 mouse_genomes_project 7 47102503 47106232 - MGP_129S1SvImJ_P0083986 Saa3 protein_coding protein_coding MGP_129S1SvImJ_T0084926.1 MGP_129S1SvImJ_G0032500.1 mouse_genomes_project 7 92308390 92341255 - MGP_129S1SvImJ_P0084926 l7Rn6 protein_coding protein_coding MGP_129S1SvImJ_T0084927.1 MGP_129S1SvImJ_G0032500.1 mouse_genomes_project 7 92309356 92341136 - MGP_129S1SvImJ_P0084927 l7Rn6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084928.1 MGP_129S1SvImJ_G0032500.1 mouse_genomes_project 7 92309573 92341154 - MGP_129S1SvImJ_P0084928 l7Rn6 protein_coding protein_coding MGP_129S1SvImJ_T0084929.1 MGP_129S1SvImJ_G0032500.1 mouse_genomes_project 7 92309606 92341068 - MGP_129S1SvImJ_P0084929 l7Rn6 protein_coding protein_coding MGP_129S1SvImJ_T0084930.1 MGP_129S1SvImJ_G0032500.1 mouse_genomes_project 7 92310225 92315497 - l7Rn6 protein_coding retained_intron MGP_129S1SvImJ_T0084931.1 MGP_129S1SvImJ_G0032500.1 mouse_genomes_project 7 92323465 92341235 - l7Rn6 protein_coding processed_transcript MGP_129S1SvImJ_T0081213.1 MGP_129S1SvImJ_G0031525.1 mouse_genomes_project 7 570718 575045 + Cnot3 protein_coding retained_intron MGP_129S1SvImJ_T0081214.1 MGP_129S1SvImJ_G0031525.1 mouse_genomes_project 7 570740 587665 + Cnot3 protein_coding retained_intron MGP_129S1SvImJ_T0081215.1 MGP_129S1SvImJ_G0031525.1 mouse_genomes_project 7 570759 577300 + MGP_129S1SvImJ_P0081215 Cnot3 protein_coding protein_coding MGP_129S1SvImJ_T0081216.1 MGP_129S1SvImJ_G0031525.1 mouse_genomes_project 7 570802 587665 + MGP_129S1SvImJ_P0081216 Cnot3 protein_coding protein_coding MGP_129S1SvImJ_T0081217.1 MGP_129S1SvImJ_G0031525.1 mouse_genomes_project 7 576757 581276 + MGP_129S1SvImJ_P0081217 Cnot3 protein_coding protein_coding MGP_129S1SvImJ_T0081218.1 MGP_129S1SvImJ_G0031525.1 mouse_genomes_project 7 577019 585298 + MGP_129S1SvImJ_P0081218 Cnot3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081219.1 MGP_129S1SvImJ_G0031525.1 mouse_genomes_project 7 584745 587659 + Cnot3 protein_coding retained_intron MGP_129S1SvImJ_T0081220.1 MGP_129S1SvImJ_G0031525.1 mouse_genomes_project 7 585946 587659 + MGP_129S1SvImJ_P0081220 Cnot3 protein_coding protein_coding MGP_129S1SvImJ_T0085519.1 MGP_129S1SvImJ_G0032686.1 mouse_genomes_project 7 107067645 107069145 - MGP_129S1SvImJ_P0085519 Hbb-y protein_coding protein_coding MGP_129S1SvImJ_T0086256.1 MGP_129S1SvImJ_G0032945.1 mouse_genomes_project 7 125913369 125970787 + MGP_129S1SvImJ_P0086256 Scnn1b protein_coding protein_coding MGP_129S1SvImJ_T0086257.1 MGP_129S1SvImJ_G0032945.1 mouse_genomes_project 7 125913408 125970789 + MGP_129S1SvImJ_P0086257 Scnn1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086260.1 MGP_129S1SvImJ_G0032945.1 mouse_genomes_project 7 125947372 125964140 + MGP_129S1SvImJ_P0086260 Scnn1b protein_coding protein_coding MGP_129S1SvImJ_T0085554.1 MGP_129S1SvImJ_G0032711.1 mouse_genomes_project 7 107470672 107486235 + MGP_129S1SvImJ_P0085554 protein_coding protein_coding MGP_129S1SvImJ_T0085557.1 MGP_129S1SvImJ_G0032711.1 mouse_genomes_project 7 107473842 107485943 + MGP_129S1SvImJ_P0085557 protein_coding protein_coding MGP_129S1SvImJ_T0085558.1 MGP_129S1SvImJ_G0032711.1 mouse_genomes_project 7 107473842 107485943 + MGP_129S1SvImJ_P0085558 protein_coding protein_coding MGP_129S1SvImJ_T0081532.1 MGP_129S1SvImJ_G0031611.1 mouse_genomes_project 7 3613083 3614137 - MGP_129S1SvImJ_P0081532 Olfr1349 protein_coding protein_coding MGP_129S1SvImJ_T0083168.1 MGP_129S1SvImJ_G0032062.1 mouse_genomes_project 7 30180103 30191750 - MGP_129S1SvImJ_P0083168 Scn1b protein_coding protein_coding MGP_129S1SvImJ_T0085579.1 MGP_129S1SvImJ_G0032719.1 mouse_genomes_project 7 107689410 107690471 + MGP_129S1SvImJ_P0085579 Olfr652 protein_coding protein_coding MGP_129S1SvImJ_T0085580.1 MGP_129S1SvImJ_G0032719.1 mouse_genomes_project 7 107689490 107690438 + MGP_129S1SvImJ_P0085580 Olfr652 protein_coding protein_coding MGP_129S1SvImJ_T0010906.1 MGP_129S1SvImJ_G0009022.1 mouse_genomes_project 7 62775357 62775417 - Mir344h-1 miRNA miRNA MGP_129S1SvImJ_T0102695.1 MGP_129S1SvImJ_G0040528.1 mouse_genomes_project 7 10901565 10902001 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102731.1 MGP_129S1SvImJ_G0040563.1 mouse_genomes_project 7 33173850 33175032 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002301.1 MGP_129S1SvImJ_G0002212.1 mouse_genomes_project 7 81497183 81499626 - TEC TEC MGP_129S1SvImJ_T0008853.1 MGP_129S1SvImJ_G0007156.1 mouse_genomes_project 7 36810416 36813629 - lincRNA lincRNA MGP_129S1SvImJ_T0084637.1 MGP_129S1SvImJ_G0032411.1 mouse_genomes_project 7 82296716 82312308 - MGP_129S1SvImJ_P0084637 Unc45a protein_coding protein_coding MGP_129S1SvImJ_T0084638.1 MGP_129S1SvImJ_G0032411.1 mouse_genomes_project 7 82296719 82311531 - MGP_129S1SvImJ_P0084638 Unc45a protein_coding protein_coding MGP_129S1SvImJ_T0084639.1 MGP_129S1SvImJ_G0032411.1 mouse_genomes_project 7 82296720 82311483 - MGP_129S1SvImJ_P0084639 Unc45a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084640.1 MGP_129S1SvImJ_G0032411.1 mouse_genomes_project 7 82296750 82311074 - MGP_129S1SvImJ_P0084640 Unc45a protein_coding protein_coding MGP_129S1SvImJ_T0084641.1 MGP_129S1SvImJ_G0032411.1 mouse_genomes_project 7 82305673 82311518 - MGP_129S1SvImJ_P0084641 Unc45a protein_coding protein_coding MGP_129S1SvImJ_T0084642.1 MGP_129S1SvImJ_G0032411.1 mouse_genomes_project 7 82309782 82311513 - Unc45a protein_coding retained_intron MGP_129S1SvImJ_T0084643.1 MGP_129S1SvImJ_G0032411.1 mouse_genomes_project 7 82310332 82311460 - Unc45a protein_coding retained_intron MGP_129S1SvImJ_T0084644.1 MGP_129S1SvImJ_G0032411.1 mouse_genomes_project 7 82310620 82311529 - MGP_129S1SvImJ_P0084644 Unc45a protein_coding protein_coding MGP_129S1SvImJ_T0084645.1 MGP_129S1SvImJ_G0032411.1 mouse_genomes_project 7 82310624 82311531 - Unc45a protein_coding processed_transcript MGP_129S1SvImJ_T0084646.1 MGP_129S1SvImJ_G0032411.1 mouse_genomes_project 7 82311015 82311523 - Unc45a protein_coding retained_intron MGP_129S1SvImJ_T0084482.1 MGP_129S1SvImJ_G0032382.1 mouse_genomes_project 7 80751827 80758638 + MGP_129S1SvImJ_P0084482 Isg20 protein_coding protein_coding MGP_129S1SvImJ_T0084483.1 MGP_129S1SvImJ_G0032382.1 mouse_genomes_project 7 80751861 80758728 + MGP_129S1SvImJ_P0084483 Isg20 protein_coding protein_coding MGP_129S1SvImJ_T0084484.1 MGP_129S1SvImJ_G0032382.1 mouse_genomes_project 7 80752168 80758819 + MGP_129S1SvImJ_P0084484 Isg20 protein_coding protein_coding MGP_129S1SvImJ_T0084485.1 MGP_129S1SvImJ_G0032382.1 mouse_genomes_project 7 80752384 80755439 + Isg20 protein_coding retained_intron MGP_129S1SvImJ_T0084486.1 MGP_129S1SvImJ_G0032382.1 mouse_genomes_project 7 80752638 80758771 + MGP_129S1SvImJ_P0084486 Isg20 protein_coding protein_coding MGP_129S1SvImJ_T0084487.1 MGP_129S1SvImJ_G0032382.1 mouse_genomes_project 7 80752732 80758608 + MGP_129S1SvImJ_P0084487 Isg20 protein_coding protein_coding MGP_129S1SvImJ_T0101349.1 MGP_129S1SvImJ_G0039416.1 mouse_genomes_project 7 121968669 121968801 + Gm25683 snoRNA snoRNA MGP_129S1SvImJ_T0002343.1 MGP_129S1SvImJ_G0002254.1 mouse_genomes_project 7 148408531 148408590 + TEC TEC MGP_129S1SvImJ_T0015812.1 MGP_129S1SvImJ_G0013901.1 mouse_genomes_project 7 48684087 48684361 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102775.1 MGP_129S1SvImJ_G0040607.1 mouse_genomes_project 7 87372900 87373761 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0018471.1 MGP_129S1SvImJ_G0015702.1 mouse_genomes_project 7 147804480 147819440 - Nctc1 processed_transcript antisense MGP_129S1SvImJ_T0018472.1 MGP_129S1SvImJ_G0015702.1 mouse_genomes_project 7 147814543 147819440 - Nctc1 processed_transcript retained_intron MGP_129S1SvImJ_T0005278.1 MGP_129S1SvImJ_G0004485.1 mouse_genomes_project 7 100305467 100353365 - Rsf1os1 antisense antisense MGP_129S1SvImJ_T0002339.1 MGP_129S1SvImJ_G0002250.1 mouse_genomes_project 7 132975451 132976057 + TEC TEC MGP_129S1SvImJ_T0085214.1 MGP_129S1SvImJ_G0032570.1 mouse_genomes_project 7 103377075 103385742 + MGP_129S1SvImJ_P0085214 Ucp2 protein_coding protein_coding MGP_129S1SvImJ_T0085215.1 MGP_129S1SvImJ_G0032570.1 mouse_genomes_project 7 103377102 103380669 + Ucp2 protein_coding retained_intron MGP_129S1SvImJ_T0085216.1 MGP_129S1SvImJ_G0032570.1 mouse_genomes_project 7 103377531 103380884 + MGP_129S1SvImJ_P0085216 Ucp2 protein_coding protein_coding MGP_129S1SvImJ_T0085217.1 MGP_129S1SvImJ_G0032570.1 mouse_genomes_project 7 103377803 103381026 + MGP_129S1SvImJ_P0085217 Ucp2 protein_coding protein_coding MGP_129S1SvImJ_T0085218.1 MGP_129S1SvImJ_G0032570.1 mouse_genomes_project 7 103379799 103381977 + MGP_129S1SvImJ_P0085218 Ucp2 protein_coding protein_coding MGP_129S1SvImJ_T0085219.1 MGP_129S1SvImJ_G0032570.1 mouse_genomes_project 7 103380916 103382346 + Ucp2 protein_coding processed_transcript MGP_129S1SvImJ_T0085220.1 MGP_129S1SvImJ_G0032570.1 mouse_genomes_project 7 103380988 103382461 + Ucp2 protein_coding processed_transcript MGP_129S1SvImJ_T0085221.1 MGP_129S1SvImJ_G0032570.1 mouse_genomes_project 7 103381861 103382332 + Ucp2 protein_coding processed_transcript MGP_129S1SvImJ_T0085222.1 MGP_129S1SvImJ_G0032570.1 mouse_genomes_project 7 103382066 103383023 + Ucp2 protein_coding processed_transcript MGP_129S1SvImJ_T0082324.1 MGP_129S1SvImJ_G0031866.1 mouse_genomes_project 7 23870528 23885174 - MGP_129S1SvImJ_P0082324 Cxcl17 protein_coding protein_coding MGP_129S1SvImJ_T0082325.1 MGP_129S1SvImJ_G0031866.1 mouse_genomes_project 7 23870528 23885174 - MGP_129S1SvImJ_P0082325 Cxcl17 protein_coding protein_coding MGP_129S1SvImJ_T0002245.1 MGP_129S1SvImJ_G0002157.1 mouse_genomes_project 7 43723189 43723642 + TEC TEC MGP_129S1SvImJ_T0085973.1 MGP_129S1SvImJ_G0032877.1 mouse_genomes_project 7 117360002 117360488 - MGP_129S1SvImJ_P0085973 protein_coding protein_coding MGP_129S1SvImJ_T0083868.1 MGP_129S1SvImJ_G0032237.1 mouse_genomes_project 7 45950569 45970516 - MGP_129S1SvImJ_P0083868 Fut2 protein_coding protein_coding MGP_129S1SvImJ_T0082461.1 MGP_129S1SvImJ_G0031903.1 mouse_genomes_project 7 25828318 25849781 - MGP_129S1SvImJ_P0082461 Itpkc protein_coding protein_coding MGP_129S1SvImJ_T0082462.1 MGP_129S1SvImJ_G0031903.1 mouse_genomes_project 7 25829116 25834199 - Itpkc protein_coding processed_transcript MGP_129S1SvImJ_T0082463.1 MGP_129S1SvImJ_G0031903.1 mouse_genomes_project 7 25833711 25835601 - Itpkc protein_coding retained_intron MGP_129S1SvImJ_T0082464.1 MGP_129S1SvImJ_G0031903.1 mouse_genomes_project 7 25846895 25849814 - Itpkc protein_coding retained_intron MGP_129S1SvImJ_T0087467.1 MGP_129S1SvImJ_G0033204.1 mouse_genomes_project 7 146106355 146108960 + MGP_129S1SvImJ_P0087467 Ifitm1 protein_coding protein_coding MGP_129S1SvImJ_T0087468.1 MGP_129S1SvImJ_G0033204.1 mouse_genomes_project 7 146107162 146108960 + MGP_129S1SvImJ_P0087468 Ifitm1 protein_coding protein_coding MGP_129S1SvImJ_T0087469.1 MGP_129S1SvImJ_G0033204.1 mouse_genomes_project 7 146107174 146108960 + MGP_129S1SvImJ_P0087469 Ifitm1 protein_coding protein_coding MGP_129S1SvImJ_T0087543.1 MGP_129S1SvImJ_G0033222.1 mouse_genomes_project 7 146474178 146477172 + MGP_129S1SvImJ_P0087543 Drd4 protein_coding protein_coding MGP_129S1SvImJ_T0086242.1 MGP_129S1SvImJ_G0032938.1 mouse_genomes_project 7 125052529 125054374 - MGP_129S1SvImJ_P0086242 protein_coding protein_coding MGP_129S1SvImJ_T0084882.1 MGP_129S1SvImJ_G0032484.1 mouse_genomes_project 7 88960540 88968091 + MGP_129S1SvImJ_P0084882 Olfr292 protein_coding protein_coding MGP_129S1SvImJ_T0086244.1 MGP_129S1SvImJ_G0032940.1 mouse_genomes_project 7 125083344 125094676 - MGP_129S1SvImJ_P0086244 Igsf6 protein_coding protein_coding MGP_129S1SvImJ_T0085500.1 MGP_129S1SvImJ_G0032669.1 mouse_genomes_project 7 106717066 106717699 + MGP_129S1SvImJ_P0085500 protein_coding protein_coding MGP_129S1SvImJ_T0008837.1 MGP_129S1SvImJ_G0007141.1 mouse_genomes_project 7 33720433 33807983 + Gm12766 lincRNA lincRNA MGP_129S1SvImJ_T0085081.1 MGP_129S1SvImJ_G0032534.1 mouse_genomes_project 7 100848934 100906303 - MGP_129S1SvImJ_P0085081 Capn5 protein_coding protein_coding MGP_129S1SvImJ_T0085082.1 MGP_129S1SvImJ_G0032534.1 mouse_genomes_project 7 100851036 100890474 - MGP_129S1SvImJ_P0085082 Capn5 protein_coding protein_coding MGP_129S1SvImJ_T0085084.1 MGP_129S1SvImJ_G0032534.1 mouse_genomes_project 7 100872007 100890342 - Capn5 protein_coding processed_transcript MGP_129S1SvImJ_T0085085.1 MGP_129S1SvImJ_G0032534.1 mouse_genomes_project 7 100890112 100893024 - MGP_129S1SvImJ_P0085085 Capn5 protein_coding protein_coding MGP_129S1SvImJ_T0085086.1 MGP_129S1SvImJ_G0032534.1 mouse_genomes_project 7 100890129 100893503 - MGP_129S1SvImJ_P0085086 Capn5 protein_coding protein_coding MGP_129S1SvImJ_T0084126.1 MGP_129S1SvImJ_G0032313.1 mouse_genomes_project 7 56651456 56704543 + Cyfip1 protein_coding retained_intron MGP_129S1SvImJ_T0084127.1 MGP_129S1SvImJ_G0032313.1 mouse_genomes_project 7 56651781 56745534 + MGP_129S1SvImJ_P0084127 Cyfip1 protein_coding protein_coding MGP_129S1SvImJ_T0084128.1 MGP_129S1SvImJ_G0032313.1 mouse_genomes_project 7 56651782 56690135 + MGP_129S1SvImJ_P0084128 Cyfip1 protein_coding protein_coding MGP_129S1SvImJ_T0084129.1 MGP_129S1SvImJ_G0032313.1 mouse_genomes_project 7 56651916 56743431 + MGP_129S1SvImJ_P0084129 Cyfip1 protein_coding protein_coding MGP_129S1SvImJ_T0084130.1 MGP_129S1SvImJ_G0032313.1 mouse_genomes_project 7 56651960 56738729 + Cyfip1 protein_coding retained_intron MGP_129S1SvImJ_T0084131.1 MGP_129S1SvImJ_G0032313.1 mouse_genomes_project 7 56651965 56743404 + MGP_129S1SvImJ_P0084131 Cyfip1 protein_coding protein_coding MGP_129S1SvImJ_T0084132.1 MGP_129S1SvImJ_G0032313.1 mouse_genomes_project 7 56684043 56736903 + MGP_129S1SvImJ_P0084132 Cyfip1 protein_coding protein_coding MGP_129S1SvImJ_T0084133.1 MGP_129S1SvImJ_G0032313.1 mouse_genomes_project 7 56709788 56713868 + Cyfip1 protein_coding retained_intron MGP_129S1SvImJ_T0084134.1 MGP_129S1SvImJ_G0032313.1 mouse_genomes_project 7 56710117 56743431 + Cyfip1 protein_coding retained_intron MGP_129S1SvImJ_T0084135.1 MGP_129S1SvImJ_G0032313.1 mouse_genomes_project 7 56710862 56717222 + Cyfip1 protein_coding retained_intron MGP_129S1SvImJ_T0084136.1 MGP_129S1SvImJ_G0032313.1 mouse_genomes_project 7 56721328 56726666 + Cyfip1 protein_coding retained_intron MGP_129S1SvImJ_T0084137.1 MGP_129S1SvImJ_G0032313.1 mouse_genomes_project 7 56741816 56743404 + Cyfip1 protein_coding retained_intron MGP_129S1SvImJ_T0008889.1 MGP_129S1SvImJ_G0007180.1 mouse_genomes_project 7 65170696 65177374 - Gm45054 lincRNA lincRNA MGP_129S1SvImJ_T0101315.1 MGP_129S1SvImJ_G0039382.1 mouse_genomes_project 7 60141869 60141938 - Gm25499 snoRNA snoRNA MGP_129S1SvImJ_T0085931.1 MGP_129S1SvImJ_G0032869.1 mouse_genomes_project 7 115931223 115981361 + MGP_129S1SvImJ_P0085931 Micalcl protein_coding protein_coding MGP_129S1SvImJ_T0085932.1 MGP_129S1SvImJ_G0032869.1 mouse_genomes_project 7 115941430 115963731 + MGP_129S1SvImJ_P0085932 Micalcl protein_coding protein_coding MGP_129S1SvImJ_T0085933.1 MGP_129S1SvImJ_G0032869.1 mouse_genomes_project 7 115941953 115981476 + MGP_129S1SvImJ_P0085933 Micalcl protein_coding protein_coding MGP_129S1SvImJ_T0085934.1 MGP_129S1SvImJ_G0032869.1 mouse_genomes_project 7 115948244 115981476 + MGP_129S1SvImJ_P0085934 Micalcl protein_coding protein_coding MGP_129S1SvImJ_T0085935.1 MGP_129S1SvImJ_G0032869.1 mouse_genomes_project 7 115975488 115981427 + Micalcl protein_coding retained_intron MGP_129S1SvImJ_T0082855.1 MGP_129S1SvImJ_G0032003.1 mouse_genomes_project 7 29144929 29155265 + MGP_129S1SvImJ_P0082855 Gm5113 protein_coding protein_coding MGP_129S1SvImJ_T0002263.1 MGP_129S1SvImJ_G0002175.1 mouse_genomes_project 7 64867095 64867454 + TEC TEC MGP_129S1SvImJ_T0085475.1 MGP_129S1SvImJ_G0032645.1 mouse_genomes_project 7 106292500 106293484 + MGP_129S1SvImJ_P0085475 Olfr593 protein_coding protein_coding MGP_129S1SvImJ_T0102801.1 MGP_129S1SvImJ_G0040633.1 mouse_genomes_project 7 106221821 106222769 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0087257.1 MGP_129S1SvImJ_G0033130.1 mouse_genomes_project 7 139708667 139767741 - MGP_129S1SvImJ_P0087257 Fam196a protein_coding protein_coding MGP_129S1SvImJ_T0015824.1 MGP_129S1SvImJ_G0013913.1 mouse_genomes_project 7 57659954 57660374 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0083415.1 MGP_129S1SvImJ_G0032115.1 mouse_genomes_project 7 42112110 42177381 + MGP_129S1SvImJ_P0083415 Vmn2r61 protein_coding protein_coding MGP_129S1SvImJ_T0083416.1 MGP_129S1SvImJ_G0032115.1 mouse_genomes_project 7 42143728 42158705 + Vmn2r61 protein_coding processed_transcript MGP_129S1SvImJ_T0008812.1 MGP_129S1SvImJ_G0007118.1 mouse_genomes_project 7 10357475 10360064 + Gm29638 lincRNA lincRNA MGP_129S1SvImJ_T0081551.1 MGP_129S1SvImJ_G0031622.1 mouse_genomes_project 7 7707239 7708235 + MGP_129S1SvImJ_P0081551 Vmn1r67 protein_coding protein_coding MGP_129S1SvImJ_T0086954.1 MGP_129S1SvImJ_G0033070.1 mouse_genomes_project 7 132464518 132526061 + MGP_129S1SvImJ_P0086954 protein_coding protein_coding MGP_129S1SvImJ_T0086955.1 MGP_129S1SvImJ_G0033070.1 mouse_genomes_project 7 132464547 132526060 + MGP_129S1SvImJ_P0086955 protein_coding protein_coding MGP_129S1SvImJ_T0086956.1 MGP_129S1SvImJ_G0033070.1 mouse_genomes_project 7 132464557 132524621 + MGP_129S1SvImJ_P0086956 protein_coding protein_coding MGP_129S1SvImJ_T0086958.1 MGP_129S1SvImJ_G0033070.1 mouse_genomes_project 7 132464561 132525080 + MGP_129S1SvImJ_P0086958 protein_coding protein_coding MGP_129S1SvImJ_T0086959.1 MGP_129S1SvImJ_G0033070.1 mouse_genomes_project 7 132464606 132474023 + protein_coding processed_transcript MGP_129S1SvImJ_T0086960.1 MGP_129S1SvImJ_G0033070.1 mouse_genomes_project 7 132464621 132474265 + MGP_129S1SvImJ_P0086960 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082648.1 MGP_129S1SvImJ_G0031953.1 mouse_genomes_project 7 27417167 27445431 - MGP_129S1SvImJ_P0082648 Acp7 protein_coding protein_coding MGP_129S1SvImJ_T0082649.1 MGP_129S1SvImJ_G0031953.1 mouse_genomes_project 7 27429011 27444871 - Acp7 protein_coding processed_transcript MGP_129S1SvImJ_T0082650.1 MGP_129S1SvImJ_G0031953.1 mouse_genomes_project 7 27429500 27444871 - Acp7 protein_coding processed_transcript MGP_129S1SvImJ_T0082651.1 MGP_129S1SvImJ_G0031953.1 mouse_genomes_project 7 27443854 27444864 - Acp7 protein_coding processed_transcript MGP_129S1SvImJ_T0082652.1 MGP_129S1SvImJ_G0031953.1 mouse_genomes_project 7 27443887 27445694 - Acp7 protein_coding processed_transcript MGP_129S1SvImJ_T0082007.1 MGP_129S1SvImJ_G0031777.1 mouse_genomes_project 7 17418215 17420806 - MGP_129S1SvImJ_P0082007 protein_coding protein_coding MGP_129S1SvImJ_T0084599.1 MGP_129S1SvImJ_G0032406.1 mouse_genomes_project 7 82212232 82229068 + MGP_129S1SvImJ_P0084599 Ttll13 protein_coding protein_coding MGP_129S1SvImJ_T0084600.1 MGP_129S1SvImJ_G0032406.1 mouse_genomes_project 7 82212281 82212661 + Ttll13 protein_coding retained_intron MGP_129S1SvImJ_T0084601.1 MGP_129S1SvImJ_G0032406.1 mouse_genomes_project 7 82212411 82227443 + Ttll13 protein_coding retained_intron MGP_129S1SvImJ_T0084602.1 MGP_129S1SvImJ_G0032406.1 mouse_genomes_project 7 82212850 82221153 + Ttll13 protein_coding retained_intron MGP_129S1SvImJ_T0084603.1 MGP_129S1SvImJ_G0032406.1 mouse_genomes_project 7 82213244 82228917 + MGP_129S1SvImJ_P0084603 Ttll13 protein_coding protein_coding MGP_129S1SvImJ_T0010852.1 MGP_129S1SvImJ_G0008968.1 mouse_genomes_project 7 2105328 2105406 - Gm26217 miRNA miRNA MGP_129S1SvImJ_T0102682.1 MGP_129S1SvImJ_G0040515.1 mouse_genomes_project 7 9377849 9379094 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0008860.1 MGP_129S1SvImJ_G0007160.1 mouse_genomes_project 7 39424922 39425493 - lincRNA lincRNA MGP_129S1SvImJ_T0101337.1 MGP_129S1SvImJ_G0039404.1 mouse_genomes_project 7 102469832 102469963 - Gm25409 snoRNA snoRNA MGP_129S1SvImJ_T0008954.1 MGP_129S1SvImJ_G0007226.1 mouse_genomes_project 7 82109795 82111398 + Gm45202 lincRNA lincRNA MGP_129S1SvImJ_T0084872.1 MGP_129S1SvImJ_G0032475.1 mouse_genomes_project 7 88649329 88650331 - MGP_129S1SvImJ_P0084872 Olfr304 protein_coding protein_coding MGP_129S1SvImJ_T0010926.1 MGP_129S1SvImJ_G0009042.1 mouse_genomes_project 7 88551221 88551317 - Gm23192 miRNA miRNA MGP_129S1SvImJ_T0102808.1 MGP_129S1SvImJ_G0040640.1 mouse_genomes_project 7 107043035 107044123 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085799.1 MGP_129S1SvImJ_G0032838.1 mouse_genomes_project 7 112437715 112487121 - MGP_129S1SvImJ_P0085799 Ric3 protein_coding protein_coding MGP_129S1SvImJ_T0085800.1 MGP_129S1SvImJ_G0032838.1 mouse_genomes_project 7 112437715 112460760 - MGP_129S1SvImJ_P0085800 Ric3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085801.1 MGP_129S1SvImJ_G0032838.1 mouse_genomes_project 7 112441351 112487112 - MGP_129S1SvImJ_P0085801 Ric3 protein_coding protein_coding MGP_129S1SvImJ_T0085802.1 MGP_129S1SvImJ_G0032838.1 mouse_genomes_project 7 112448756 112487101 - Ric3 protein_coding retained_intron MGP_129S1SvImJ_T0085803.1 MGP_129S1SvImJ_G0032838.1 mouse_genomes_project 7 112460422 112487112 - Ric3 protein_coding retained_intron MGP_129S1SvImJ_T0085804.1 MGP_129S1SvImJ_G0032838.1 mouse_genomes_project 7 112484533 112487095 - Ric3 protein_coding processed_transcript MGP_129S1SvImJ_T0015786.1 MGP_129S1SvImJ_G0013875.1 mouse_genomes_project 7 39362673 39363216 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015703.1 MGP_129S1SvImJ_G0013792.1 mouse_genomes_project 7 1326596 1327059 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005182.1 MGP_129S1SvImJ_G0004415.1 mouse_genomes_project 7 17860671 17862936 + Gm16175 antisense antisense MGP_129S1SvImJ_T0085168.1 MGP_129S1SvImJ_G0032557.1 mouse_genomes_project 7 102644513 102662939 - MGP_129S1SvImJ_P0085168 Neu3 protein_coding protein_coding MGP_129S1SvImJ_T0099005.1 MGP_129S1SvImJ_G0037078.1 mouse_genomes_project 7 127114694 127115278 + Gm20274 sense_intronic sense_intronic MGP_129S1SvImJ_T0098635.1 MGP_129S1SvImJ_G0036720.1 mouse_genomes_project 7 67598678 67598768 - Gm23957 rRNA rRNA MGP_129S1SvImJ_T0015767.1 MGP_129S1SvImJ_G0013856.1 mouse_genomes_project 7 29716468 29716996 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085791.1 MGP_129S1SvImJ_G0032833.1 mouse_genomes_project 7 112256178 112257233 - MGP_129S1SvImJ_P0085791 Olfr517 protein_coding protein_coding MGP_129S1SvImJ_T0081463.1 MGP_129S1SvImJ_G0031575.1 mouse_genomes_project 7 1971743 1974723 + MGP_129S1SvImJ_P0081463 Zfp524 protein_coding protein_coding MGP_129S1SvImJ_T0015719.1 MGP_129S1SvImJ_G0013808.1 mouse_genomes_project 7 10176296 10176922 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101762.1 MGP_129S1SvImJ_G0039746.1 mouse_genomes_project 7 27287101 27292246 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101763.1 MGP_129S1SvImJ_G0039746.1 mouse_genomes_project 7 27291473 27292028 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0008865.1 MGP_129S1SvImJ_G0007162.1 mouse_genomes_project 7 39889930 39899332 + 4933404I11Rik lincRNA lincRNA MGP_129S1SvImJ_T0086957.1 MGP_129S1SvImJ_G0033071.1 mouse_genomes_project 7 132464561 132532886 + MGP_129S1SvImJ_P0086957 Itgam protein_coding protein_coding MGP_129S1SvImJ_T0086961.1 MGP_129S1SvImJ_G0033071.1 mouse_genomes_project 7 132523966 132531929 + MGP_129S1SvImJ_P0086961 Itgam protein_coding protein_coding MGP_129S1SvImJ_T0081491.1 MGP_129S1SvImJ_G0031595.1 mouse_genomes_project 7 3235572 3248043 + MGP_129S1SvImJ_P0081491 Zfp444 protein_coding protein_coding MGP_129S1SvImJ_T0081492.1 MGP_129S1SvImJ_G0031595.1 mouse_genomes_project 7 3235828 3254472 + MGP_129S1SvImJ_P0081492 Zfp444 protein_coding protein_coding MGP_129S1SvImJ_T0081493.1 MGP_129S1SvImJ_G0031595.1 mouse_genomes_project 7 3235848 3255425 + MGP_129S1SvImJ_P0081493 Zfp444 protein_coding protein_coding MGP_129S1SvImJ_T0081494.1 MGP_129S1SvImJ_G0031595.1 mouse_genomes_project 7 3235859 3254471 + MGP_129S1SvImJ_P0081494 Zfp444 protein_coding protein_coding MGP_129S1SvImJ_T0081495.1 MGP_129S1SvImJ_G0031595.1 mouse_genomes_project 7 3237153 3247915 + MGP_129S1SvImJ_P0081495 Zfp444 protein_coding protein_coding MGP_129S1SvImJ_T0081496.1 MGP_129S1SvImJ_G0031595.1 mouse_genomes_project 7 3237326 3248523 + Zfp444 protein_coding processed_transcript MGP_129S1SvImJ_T0081497.1 MGP_129S1SvImJ_G0031595.1 mouse_genomes_project 7 3237381 3253896 + MGP_129S1SvImJ_P0081497 Zfp444 protein_coding protein_coding MGP_129S1SvImJ_T0081498.1 MGP_129S1SvImJ_G0031595.1 mouse_genomes_project 7 3245547 3252208 + MGP_129S1SvImJ_P0081498 Zfp444 protein_coding protein_coding MGP_129S1SvImJ_T0081499.1 MGP_129S1SvImJ_G0031595.1 mouse_genomes_project 7 3247667 3252283 + MGP_129S1SvImJ_P0081499 Zfp444 protein_coding protein_coding MGP_129S1SvImJ_T0002247.1 MGP_129S1SvImJ_G0002159.1 mouse_genomes_project 7 44470815 44470972 + TEC TEC MGP_129S1SvImJ_T0081445.1 MGP_129S1SvImJ_G0031568.1 mouse_genomes_project 7 1868580 1875367 + MGP_129S1SvImJ_P0081445 Zfp628 protein_coding protein_coding MGP_129S1SvImJ_T0084028.1 MGP_129S1SvImJ_G0032282.1 mouse_genomes_project 7 47604919 47624949 - MGP_129S1SvImJ_P0084028 Mrgpra6 protein_coding protein_coding MGP_129S1SvImJ_T0084029.1 MGP_129S1SvImJ_G0032282.1 mouse_genomes_project 7 47604929 47606801 - MGP_129S1SvImJ_P0084029 Mrgpra6 protein_coding protein_coding MGP_129S1SvImJ_T0087783.1 MGP_129S1SvImJ_G0033263.1 mouse_genomes_project 7 148026425 148027272 - MGP_129S1SvImJ_P0087783 protein_coding protein_coding MGP_129S1SvImJ_T0084857.1 MGP_129S1SvImJ_G0032461.1 mouse_genomes_project 7 87029626 87039114 + MGP_129S1SvImJ_P0084857 Olfr291 protein_coding protein_coding MGP_129S1SvImJ_T0083650.1 MGP_129S1SvImJ_G0032179.1 mouse_genomes_project 7 45021655 45037724 + MGP_129S1SvImJ_P0083650 Il4i1 protein_coding protein_coding MGP_129S1SvImJ_T0083651.1 MGP_129S1SvImJ_G0032179.1 mouse_genomes_project 7 45021937 45048835 + MGP_129S1SvImJ_P0083651 Il4i1 protein_coding protein_coding MGP_129S1SvImJ_T0083652.1 MGP_129S1SvImJ_G0032179.1 mouse_genomes_project 7 45021954 45039865 + Il4i1 protein_coding processed_transcript MGP_129S1SvImJ_T0083653.1 MGP_129S1SvImJ_G0032179.1 mouse_genomes_project 7 45044317 45048840 + MGP_129S1SvImJ_P0083653 Il4i1 protein_coding protein_coding MGP_129S1SvImJ_T0083654.1 MGP_129S1SvImJ_G0032179.1 mouse_genomes_project 7 45044321 45046327 + Il4i1 protein_coding retained_intron MGP_129S1SvImJ_T0083655.1 MGP_129S1SvImJ_G0032179.1 mouse_genomes_project 7 45046721 45047812 + Il4i1 protein_coding retained_intron MGP_129S1SvImJ_T0083656.1 MGP_129S1SvImJ_G0032179.1 mouse_genomes_project 7 45047228 45047799 + MGP_129S1SvImJ_P0083656 Il4i1 protein_coding protein_coding MGP_129S1SvImJ_T0084953.1 MGP_129S1SvImJ_G0032508.1 mouse_genomes_project 7 92877298 92883771 - MGP_129S1SvImJ_P0084953 Tmem126a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084954.1 MGP_129S1SvImJ_G0032508.1 mouse_genomes_project 7 92877303 92883792 - MGP_129S1SvImJ_P0084954 Tmem126a protein_coding protein_coding MGP_129S1SvImJ_T0084955.1 MGP_129S1SvImJ_G0032508.1 mouse_genomes_project 7 92881768 92883771 - Tmem126a protein_coding retained_intron MGP_129S1SvImJ_T0002345.1 MGP_129S1SvImJ_G0002256.1 mouse_genomes_project 7 148631377 148632779 + TEC TEC MGP_129S1SvImJ_T0085668.1 MGP_129S1SvImJ_G0032760.1 mouse_genomes_project 7 108903662 108923424 + Dnhd1 protein_coding processed_transcript MGP_129S1SvImJ_T0085674.1 MGP_129S1SvImJ_G0032760.1 mouse_genomes_project 7 108903679 108950637 + Dnhd1 protein_coding processed_transcript MGP_129S1SvImJ_T0085678.1 MGP_129S1SvImJ_G0032760.1 mouse_genomes_project 7 108915176 108989670 + MGP_129S1SvImJ_P0085678 Dnhd1 protein_coding protein_coding MGP_129S1SvImJ_T0085679.1 MGP_129S1SvImJ_G0032760.1 mouse_genomes_project 7 108915557 108989677 + MGP_129S1SvImJ_P0085679 Dnhd1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0085680.1 MGP_129S1SvImJ_G0032760.1 mouse_genomes_project 7 108940178 108944403 + Dnhd1 protein_coding retained_intron MGP_129S1SvImJ_T0085681.1 MGP_129S1SvImJ_G0032760.1 mouse_genomes_project 7 108944226 108950630 + MGP_129S1SvImJ_P0085681 Dnhd1 protein_coding protein_coding MGP_129S1SvImJ_T0083221.1 MGP_129S1SvImJ_G0032075.1 mouse_genomes_project 7 33495568 33548573 - MGP_129S1SvImJ_P0083221 4931406P16Rik protein_coding protein_coding MGP_129S1SvImJ_T0083222.1 MGP_129S1SvImJ_G0032075.1 mouse_genomes_project 7 33498029 33505155 - MGP_129S1SvImJ_P0083222 4931406P16Rik protein_coding protein_coding MGP_129S1SvImJ_T0083223.1 MGP_129S1SvImJ_G0032075.1 mouse_genomes_project 7 33499030 33504966 - 4931406P16Rik protein_coding retained_intron MGP_129S1SvImJ_T0083225.1 MGP_129S1SvImJ_G0032075.1 mouse_genomes_project 7 33515076 33518252 - 4931406P16Rik protein_coding retained_intron MGP_129S1SvImJ_T0083226.1 MGP_129S1SvImJ_G0032075.1 mouse_genomes_project 7 33547334 33579441 - 4931406P16Rik protein_coding retained_intron MGP_129S1SvImJ_T0083227.1 MGP_129S1SvImJ_G0032075.1 mouse_genomes_project 7 33548853 33579436 - 4931406P16Rik protein_coding processed_transcript MGP_129S1SvImJ_T0083228.1 MGP_129S1SvImJ_G0032075.1 mouse_genomes_project 7 33548939 33571405 - 4931406P16Rik protein_coding processed_transcript MGP_129S1SvImJ_T0083229.1 MGP_129S1SvImJ_G0032075.1 mouse_genomes_project 7 33577957 33579399 - 4931406P16Rik protein_coding processed_transcript MGP_129S1SvImJ_T0002260.1 MGP_129S1SvImJ_G0002172.1 mouse_genomes_project 7 56800083 56801261 - TEC TEC MGP_129S1SvImJ_T0009043.1 MGP_129S1SvImJ_G0007278.1 mouse_genomes_project 7 132378693 132381001 - Gm26690 lincRNA lincRNA MGP_129S1SvImJ_T0084737.1 MGP_129S1SvImJ_G0032424.1 mouse_genomes_project 7 83083733 83136119 + MGP_129S1SvImJ_P0084737 protein_coding protein_coding MGP_129S1SvImJ_T0084738.1 MGP_129S1SvImJ_G0032424.1 mouse_genomes_project 7 83124457 83125320 + protein_coding retained_intron MGP_129S1SvImJ_T0015791.1 MGP_129S1SvImJ_G0013880.1 mouse_genomes_project 7 41449408 41451010 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085062.1 MGP_129S1SvImJ_G0032531.1 mouse_genomes_project 7 100500025 100573282 + Pak1 protein_coding retained_intron MGP_129S1SvImJ_T0085063.1 MGP_129S1SvImJ_G0032531.1 mouse_genomes_project 7 100500025 100637769 + MGP_129S1SvImJ_P0085063 Pak1 protein_coding protein_coding MGP_129S1SvImJ_T0085064.1 MGP_129S1SvImJ_G0032531.1 mouse_genomes_project 7 100543854 100584983 + MGP_129S1SvImJ_P0085064 Pak1 protein_coding protein_coding MGP_129S1SvImJ_T0085065.1 MGP_129S1SvImJ_G0032531.1 mouse_genomes_project 7 100557583 100638267 + MGP_129S1SvImJ_P0085065 Pak1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085066.1 MGP_129S1SvImJ_G0032531.1 mouse_genomes_project 7 100557583 100638267 + MGP_129S1SvImJ_P0085066 Pak1 protein_coding protein_coding MGP_129S1SvImJ_T0085067.1 MGP_129S1SvImJ_G0032531.1 mouse_genomes_project 7 100618619 100637168 + Pak1 protein_coding retained_intron MGP_129S1SvImJ_T0101352.1 MGP_129S1SvImJ_G0039419.1 mouse_genomes_project 7 125059621 125059758 - Gm27991 snoRNA snoRNA MGP_129S1SvImJ_T0084937.1 MGP_129S1SvImJ_G0032504.1 mouse_genomes_project 7 92637554 92679121 - MGP_129S1SvImJ_P0084937 Ccdc83 protein_coding protein_coding MGP_129S1SvImJ_T0084938.1 MGP_129S1SvImJ_G0032504.1 mouse_genomes_project 7 92648050 92679121 - MGP_129S1SvImJ_P0084938 Ccdc83 protein_coding protein_coding MGP_129S1SvImJ_T0084939.1 MGP_129S1SvImJ_G0032504.1 mouse_genomes_project 7 92649407 92679121 - MGP_129S1SvImJ_P0084939 Ccdc83 protein_coding protein_coding MGP_129S1SvImJ_T0098642.1 MGP_129S1SvImJ_G0036727.1 mouse_genomes_project 7 133212772 133212890 - n-R5s158 rRNA rRNA MGP_129S1SvImJ_T0010889.1 MGP_129S1SvImJ_G0009005.1 mouse_genomes_project 7 45362195 45362269 - Mir5121 miRNA miRNA MGP_129S1SvImJ_T0082716.1 MGP_129S1SvImJ_G0031968.1 mouse_genomes_project 7 27858230 27869835 - MGP_129S1SvImJ_P0082716 Eif3k protein_coding protein_coding MGP_129S1SvImJ_T0084200.1 MGP_129S1SvImJ_G0032331.1 mouse_genomes_project 7 64504676 64860222 + MGP_129S1SvImJ_P0084200 Otud7a protein_coding protein_coding MGP_129S1SvImJ_T0084201.1 MGP_129S1SvImJ_G0032331.1 mouse_genomes_project 7 64504702 64712290 + Otud7a protein_coding processed_transcript MGP_129S1SvImJ_T0084202.1 MGP_129S1SvImJ_G0032331.1 mouse_genomes_project 7 64751900 64859183 + MGP_129S1SvImJ_P0084202 Otud7a protein_coding protein_coding MGP_129S1SvImJ_T0084203.1 MGP_129S1SvImJ_G0032331.1 mouse_genomes_project 7 64786277 64859925 + MGP_129S1SvImJ_P0084203 Otud7a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0084204.1 MGP_129S1SvImJ_G0032331.1 mouse_genomes_project 7 64855895 64859119 + MGP_129S1SvImJ_P0084204 Otud7a protein_coding protein_coding MGP_129S1SvImJ_T0010903.1 MGP_129S1SvImJ_G0009019.1 mouse_genomes_project 7 62766329 62766409 - Mir344d-3 miRNA miRNA MGP_129S1SvImJ_T0005240.1 MGP_129S1SvImJ_G0004457.1 mouse_genomes_project 7 57047799 57048764 - Gm44506 antisense antisense MGP_129S1SvImJ_T0084978.1 MGP_129S1SvImJ_G0032513.1 mouse_genomes_project 7 95196099 95228203 - MGP_129S1SvImJ_P0084978 Pcf11 protein_coding protein_coding MGP_129S1SvImJ_T0084979.1 MGP_129S1SvImJ_G0032513.1 mouse_genomes_project 7 95196647 95221802 - MGP_129S1SvImJ_P0084979 Pcf11 protein_coding protein_coding MGP_129S1SvImJ_T0084980.1 MGP_129S1SvImJ_G0032513.1 mouse_genomes_project 7 95199205 95200597 - Pcf11 protein_coding retained_intron MGP_129S1SvImJ_T0085362.1 MGP_129S1SvImJ_G0032594.1 mouse_genomes_project 7 104930071 104940735 - MGP_129S1SvImJ_P0085362 Lrrc51 protein_coding protein_coding MGP_129S1SvImJ_T0085363.1 MGP_129S1SvImJ_G0032594.1 mouse_genomes_project 7 104930076 104940297 - MGP_129S1SvImJ_P0085363 Lrrc51 protein_coding protein_coding MGP_129S1SvImJ_T0085364.1 MGP_129S1SvImJ_G0032594.1 mouse_genomes_project 7 104930076 104940748 - MGP_129S1SvImJ_P0085364 Lrrc51 protein_coding protein_coding MGP_129S1SvImJ_T0085365.1 MGP_129S1SvImJ_G0032594.1 mouse_genomes_project 7 104930077 104954748 - MGP_129S1SvImJ_P0085365 Lrrc51 protein_coding protein_coding MGP_129S1SvImJ_T0085366.1 MGP_129S1SvImJ_G0032594.1 mouse_genomes_project 7 104930077 104954810 - MGP_129S1SvImJ_P0085366 Lrrc51 protein_coding protein_coding MGP_129S1SvImJ_T0085367.1 MGP_129S1SvImJ_G0032594.1 mouse_genomes_project 7 104930077 104940722 - MGP_129S1SvImJ_P0085367 Lrrc51 protein_coding protein_coding MGP_129S1SvImJ_T0085368.1 MGP_129S1SvImJ_G0032594.1 mouse_genomes_project 7 104930081 104940706 - MGP_129S1SvImJ_P0085368 Lrrc51 protein_coding protein_coding MGP_129S1SvImJ_T0085369.1 MGP_129S1SvImJ_G0032594.1 mouse_genomes_project 7 104930088 104954837 - Lrrc51 protein_coding processed_transcript MGP_129S1SvImJ_T0085370.1 MGP_129S1SvImJ_G0032594.1 mouse_genomes_project 7 104930245 104954744 - MGP_129S1SvImJ_P0085370 Lrrc51 protein_coding protein_coding MGP_129S1SvImJ_T0085371.1 MGP_129S1SvImJ_G0032594.1 mouse_genomes_project 7 104930261 104954772 - MGP_129S1SvImJ_P0085371 Lrrc51 protein_coding protein_coding MGP_129S1SvImJ_T0102726.1 MGP_129S1SvImJ_G0040558.1 mouse_genomes_project 7 32997145 32997971 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0086400.1 MGP_129S1SvImJ_G0032973.1 mouse_genomes_project 7 130331643 130384385 - MGP_129S1SvImJ_P0086400 Xpo6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0086401.1 MGP_129S1SvImJ_G0032973.1 mouse_genomes_project 7 130333295 130438896 - MGP_129S1SvImJ_P0086401 Xpo6 protein_coding protein_coding MGP_129S1SvImJ_T0086402.1 MGP_129S1SvImJ_G0032973.1 mouse_genomes_project 7 130333296 130438803 - MGP_129S1SvImJ_P0086402 Xpo6 protein_coding protein_coding MGP_129S1SvImJ_T0086403.1 MGP_129S1SvImJ_G0032973.1 mouse_genomes_project 7 130333301 130341633 - Xpo6 protein_coding retained_intron MGP_129S1SvImJ_T0086404.1 MGP_129S1SvImJ_G0032973.1 mouse_genomes_project 7 130333301 130396535 - Xpo6 protein_coding processed_transcript MGP_129S1SvImJ_T0086405.1 MGP_129S1SvImJ_G0032973.1 mouse_genomes_project 7 130333301 130336390 - MGP_129S1SvImJ_P0086405 Xpo6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086406.1 MGP_129S1SvImJ_G0032973.1 mouse_genomes_project 7 130333314 130338748 - MGP_129S1SvImJ_P0086406 Xpo6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086407.1 MGP_129S1SvImJ_G0032973.1 mouse_genomes_project 7 130333649 130336603 - Xpo6 protein_coding retained_intron MGP_129S1SvImJ_T0086408.1 MGP_129S1SvImJ_G0032973.1 mouse_genomes_project 7 130333926 130338711 - MGP_129S1SvImJ_P0086408 Xpo6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086409.1 MGP_129S1SvImJ_G0032973.1 mouse_genomes_project 7 130336338 130344496 - MGP_129S1SvImJ_P0086409 Xpo6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086410.1 MGP_129S1SvImJ_G0032973.1 mouse_genomes_project 7 130340102 130344428 - MGP_129S1SvImJ_P0086410 Xpo6 protein_coding protein_coding MGP_129S1SvImJ_T0086411.1 MGP_129S1SvImJ_G0032973.1 mouse_genomes_project 7 130344501 130373142 - MGP_129S1SvImJ_P0086411 Xpo6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086412.1 MGP_129S1SvImJ_G0032973.1 mouse_genomes_project 7 130350957 130438817 - Xpo6 protein_coding retained_intron MGP_129S1SvImJ_T0086413.1 MGP_129S1SvImJ_G0032973.1 mouse_genomes_project 7 130360737 130387894 - MGP_129S1SvImJ_P0086413 Xpo6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086414.1 MGP_129S1SvImJ_G0032973.1 mouse_genomes_project 7 130373122 130396676 - MGP_129S1SvImJ_P0086414 Xpo6 protein_coding protein_coding MGP_129S1SvImJ_T0086415.1 MGP_129S1SvImJ_G0032973.1 mouse_genomes_project 7 130384154 130396684 - Xpo6 protein_coding processed_transcript MGP_129S1SvImJ_T0086416.1 MGP_129S1SvImJ_G0032973.1 mouse_genomes_project 7 130386546 130438737 - Xpo6 protein_coding processed_transcript MGP_129S1SvImJ_T0086417.1 MGP_129S1SvImJ_G0032973.1 mouse_genomes_project 7 130387115 130438296 - MGP_129S1SvImJ_P0086417 Xpo6 protein_coding protein_coding MGP_129S1SvImJ_T0086418.1 MGP_129S1SvImJ_G0032973.1 mouse_genomes_project 7 130396671 130438323 - MGP_129S1SvImJ_P0086418 Xpo6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086419.1 MGP_129S1SvImJ_G0032973.1 mouse_genomes_project 7 130404941 130418270 - Xpo6 protein_coding processed_transcript MGP_129S1SvImJ_T0086420.1 MGP_129S1SvImJ_G0032973.1 mouse_genomes_project 7 130416401 130424119 - Xpo6 protein_coding retained_intron MGP_129S1SvImJ_T0084550.1 MGP_129S1SvImJ_G0032392.1 mouse_genomes_project 7 81602130 81619845 - MGP_129S1SvImJ_P0084550 Kif7 protein_coding protein_coding MGP_129S1SvImJ_T0084551.1 MGP_129S1SvImJ_G0032392.1 mouse_genomes_project 7 81602131 81618212 - MGP_129S1SvImJ_P0084551 Kif7 protein_coding protein_coding MGP_129S1SvImJ_T0084552.1 MGP_129S1SvImJ_G0032392.1 mouse_genomes_project 7 81602131 81618212 - MGP_129S1SvImJ_P0084552 Kif7 protein_coding protein_coding MGP_129S1SvImJ_T0084553.1 MGP_129S1SvImJ_G0032392.1 mouse_genomes_project 7 81602555 81619794 - MGP_129S1SvImJ_P0084553 Kif7 protein_coding protein_coding MGP_129S1SvImJ_T0100074.1 MGP_129S1SvImJ_G0038141.1 mouse_genomes_project 7 99612295 99612404 - Gm22226 snRNA snRNA MGP_129S1SvImJ_T0102827.1 MGP_129S1SvImJ_G0040659.1 mouse_genomes_project 7 132751250 132751444 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0018355.1 MGP_129S1SvImJ_G0015653.1 mouse_genomes_project 7 557565 570087 - Gm15927 processed_transcript antisense MGP_129S1SvImJ_T0018356.1 MGP_129S1SvImJ_G0015653.1 mouse_genomes_project 7 567755 568702 - Gm15927 processed_transcript antisense MGP_129S1SvImJ_T0018357.1 MGP_129S1SvImJ_G0015653.1 mouse_genomes_project 7 567756 570055 - Gm15927 processed_transcript retained_intron MGP_129S1SvImJ_T0018358.1 MGP_129S1SvImJ_G0015653.1 mouse_genomes_project 7 569549 570028 - Gm15927 processed_transcript processed_transcript MGP_129S1SvImJ_T0018359.1 MGP_129S1SvImJ_G0015653.1 mouse_genomes_project 7 569764 570338 - Gm15927 processed_transcript processed_transcript MGP_129S1SvImJ_T0085192.1 MGP_129S1SvImJ_G0032566.1 mouse_genomes_project 7 103159365 103194324 + MGP_129S1SvImJ_P0085192 P4ha3 protein_coding protein_coding MGP_129S1SvImJ_T0085193.1 MGP_129S1SvImJ_G0032566.1 mouse_genomes_project 7 103159365 103194324 + MGP_129S1SvImJ_P0085193 P4ha3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085194.1 MGP_129S1SvImJ_G0032566.1 mouse_genomes_project 7 103159387 103172460 + P4ha3 protein_coding retained_intron MGP_129S1SvImJ_T0085195.1 MGP_129S1SvImJ_G0032566.1 mouse_genomes_project 7 103167642 103194323 + MGP_129S1SvImJ_P0085195 P4ha3 protein_coding protein_coding MGP_129S1SvImJ_T0086157.1 MGP_129S1SvImJ_G0032916.1 mouse_genomes_project 7 123640901 123646567 - MGP_129S1SvImJ_P0086157 Thumpd1 protein_coding protein_coding MGP_129S1SvImJ_T0102686.1 MGP_129S1SvImJ_G0040519.1 mouse_genomes_project 7 9479758 9480580 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102685.1 MGP_129S1SvImJ_G0040518.1 mouse_genomes_project 7 9473632 9474466 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0087878.1 MGP_129S1SvImJ_G0033285.1 mouse_genomes_project 7 149197021 149202943 + Gm498 protein_coding processed_transcript MGP_129S1SvImJ_T0087879.1 MGP_129S1SvImJ_G0033285.1 mouse_genomes_project 7 149199323 149228390 + MGP_129S1SvImJ_P0087879 Gm498 protein_coding protein_coding MGP_129S1SvImJ_T0087880.1 MGP_129S1SvImJ_G0033285.1 mouse_genomes_project 7 149199329 149229388 + MGP_129S1SvImJ_P0087880 Gm498 protein_coding protein_coding MGP_129S1SvImJ_T0084984.1 MGP_129S1SvImJ_G0032515.1 mouse_genomes_project 7 95419132 95437146 - MGP_129S1SvImJ_P0084984 Ddias protein_coding protein_coding MGP_129S1SvImJ_T0015910.1 MGP_129S1SvImJ_G0013999.1 mouse_genomes_project 7 126331279 126332003 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010844.1 MGP_129S1SvImJ_G0008960.1 mouse_genomes_project 7 95588 95650 - Mir292b miRNA miRNA MGP_129S1SvImJ_T0083800.1 MGP_129S1SvImJ_G0032221.1 mouse_genomes_project 7 45677845 45694167 - MGP_129S1SvImJ_P0083800 Ruvbl2 protein_coding protein_coding MGP_129S1SvImJ_T0083801.1 MGP_129S1SvImJ_G0032221.1 mouse_genomes_project 7 45677891 45690617 - MGP_129S1SvImJ_P0083801 Ruvbl2 protein_coding protein_coding MGP_129S1SvImJ_T0083802.1 MGP_129S1SvImJ_G0032221.1 mouse_genomes_project 7 45680944 45690703 - MGP_129S1SvImJ_P0083802 Ruvbl2 protein_coding protein_coding MGP_129S1SvImJ_T0084567.1 MGP_129S1SvImJ_G0032397.1 mouse_genomes_project 7 81723690 81726403 + MGP_129S1SvImJ_P0084567 Mesp2 protein_coding protein_coding MGP_129S1SvImJ_T0085623.1 MGP_129S1SvImJ_G0032753.1 mouse_genomes_project 7 108730781 108732372 - MGP_129S1SvImJ_P0085623 Prkcdbp protein_coding protein_coding MGP_129S1SvImJ_T0087038.1 MGP_129S1SvImJ_G0033086.1 mouse_genomes_project 7 133133608 133176887 - MGP_129S1SvImJ_P0087038 Mcmbp protein_coding protein_coding MGP_129S1SvImJ_T0087039.1 MGP_129S1SvImJ_G0033086.1 mouse_genomes_project 7 133134910 133176878 - MGP_129S1SvImJ_P0087039 Mcmbp protein_coding protein_coding MGP_129S1SvImJ_T0087040.1 MGP_129S1SvImJ_G0033086.1 mouse_genomes_project 7 133135330 133136349 - Mcmbp protein_coding processed_transcript MGP_129S1SvImJ_T0087041.1 MGP_129S1SvImJ_G0033086.1 mouse_genomes_project 7 133136452 133139739 - Mcmbp protein_coding retained_intron MGP_129S1SvImJ_T0087042.1 MGP_129S1SvImJ_G0033086.1 mouse_genomes_project 7 133149284 133151533 - Mcmbp protein_coding retained_intron MGP_129S1SvImJ_T0081961.1 MGP_129S1SvImJ_G0031767.1 mouse_genomes_project 7 17233068 17256002 - MGP_129S1SvImJ_P0081961 Vasp protein_coding protein_coding MGP_129S1SvImJ_T0081962.1 MGP_129S1SvImJ_G0031767.1 mouse_genomes_project 7 17233723 17234271 - Vasp protein_coding retained_intron MGP_129S1SvImJ_T0081963.1 MGP_129S1SvImJ_G0031767.1 mouse_genomes_project 7 17236803 17237219 - Vasp protein_coding processed_transcript MGP_129S1SvImJ_T0081964.1 MGP_129S1SvImJ_G0031767.1 mouse_genomes_project 7 17237004 17244365 - Vasp protein_coding processed_transcript MGP_129S1SvImJ_T0083412.1 MGP_129S1SvImJ_G0032112.1 mouse_genomes_project 7 41649245 41669801 - MGP_129S1SvImJ_P0083412 protein_coding protein_coding MGP_129S1SvImJ_T0085450.1 MGP_129S1SvImJ_G0032623.1 mouse_genomes_project 7 105763459 105764516 + MGP_129S1SvImJ_P0085450 Olfr557 protein_coding protein_coding MGP_129S1SvImJ_T0086968.1 MGP_129S1SvImJ_G0033074.1 mouse_genomes_project 7 132560557 132611367 + MGP_129S1SvImJ_P0086968 protein_coding protein_coding MGP_129S1SvImJ_T0086969.1 MGP_129S1SvImJ_G0033074.1 mouse_genomes_project 7 132577186 132611370 + MGP_129S1SvImJ_P0086969 protein_coding protein_coding MGP_129S1SvImJ_T0086970.1 MGP_129S1SvImJ_G0033074.1 mouse_genomes_project 7 132577195 132611367 + MGP_129S1SvImJ_P0086970 protein_coding protein_coding MGP_129S1SvImJ_T0086971.1 MGP_129S1SvImJ_G0033074.1 mouse_genomes_project 7 132609487 132611370 + MGP_129S1SvImJ_P0086971 protein_coding protein_coding MGP_129S1SvImJ_T0086972.1 MGP_129S1SvImJ_G0033074.1 mouse_genomes_project 7 132609749 132629889 + MGP_129S1SvImJ_P0086972 protein_coding protein_coding MGP_129S1SvImJ_T0015933.1 MGP_129S1SvImJ_G0014022.1 mouse_genomes_project 7 133435200 133435885 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085719.1 MGP_129S1SvImJ_G0032770.1 mouse_genomes_project 7 110069559 110072173 - MGP_129S1SvImJ_P0085719 protein_coding protein_coding MGP_129S1SvImJ_T0100081.1 MGP_129S1SvImJ_G0038148.1 mouse_genomes_project 7 113464543 113464684 + Gm23100 snRNA snRNA MGP_129S1SvImJ_T0081563.1 MGP_129S1SvImJ_G0031630.1 mouse_genomes_project 7 8262957 8271803 - MGP_129S1SvImJ_P0081563 Aurkc protein_coding protein_coding MGP_129S1SvImJ_T0083895.1 MGP_129S1SvImJ_G0032246.1 mouse_genomes_project 7 46040696 46072217 - MGP_129S1SvImJ_P0083895 Sult2b1 protein_coding protein_coding MGP_129S1SvImJ_T0083896.1 MGP_129S1SvImJ_G0032246.1 mouse_genomes_project 7 46040713 46052714 - MGP_129S1SvImJ_P0083896 Sult2b1 protein_coding protein_coding MGP_129S1SvImJ_T0083897.1 MGP_129S1SvImJ_G0032246.1 mouse_genomes_project 7 46045774 46052714 - MGP_129S1SvImJ_P0083897 Sult2b1 protein_coding protein_coding MGP_129S1SvImJ_T0083898.1 MGP_129S1SvImJ_G0032246.1 mouse_genomes_project 7 46045808 46052977 - Sult2b1 protein_coding processed_transcript MGP_129S1SvImJ_T0083899.1 MGP_129S1SvImJ_G0032246.1 mouse_genomes_project 7 46071078 46072135 - Sult2b1 protein_coding processed_transcript MGP_129S1SvImJ_T0084800.1 MGP_129S1SvImJ_G0032443.1 mouse_genomes_project 7 84438732 84443063 + Adamtsl3 protein_coding processed_transcript MGP_129S1SvImJ_T0084801.1 MGP_129S1SvImJ_G0032443.1 mouse_genomes_project 7 84438770 84741408 + MGP_129S1SvImJ_P0084801 Adamtsl3 protein_coding protein_coding MGP_129S1SvImJ_T0084802.1 MGP_129S1SvImJ_G0032443.1 mouse_genomes_project 7 84440256 84739394 + MGP_129S1SvImJ_P0084802 Adamtsl3 protein_coding protein_coding MGP_129S1SvImJ_T0084803.1 MGP_129S1SvImJ_G0032443.1 mouse_genomes_project 7 84521208 84582300 + Adamtsl3 protein_coding retained_intron MGP_129S1SvImJ_T0084804.1 MGP_129S1SvImJ_G0032443.1 mouse_genomes_project 7 84738740 84739733 + MGP_129S1SvImJ_P0084804 Adamtsl3 protein_coding protein_coding MGP_129S1SvImJ_T0087361.1 MGP_129S1SvImJ_G0033163.1 mouse_genomes_project 7 145184659 145190283 - MGP_129S1SvImJ_P0087361 Fuom protein_coding protein_coding MGP_129S1SvImJ_T0087362.1 MGP_129S1SvImJ_G0033163.1 mouse_genomes_project 7 145186400 145190286 - MGP_129S1SvImJ_P0087362 Fuom protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087363.1 MGP_129S1SvImJ_G0033163.1 mouse_genomes_project 7 145187359 145190256 - MGP_129S1SvImJ_P0087363 Fuom protein_coding protein_coding MGP_129S1SvImJ_T0087364.1 MGP_129S1SvImJ_G0033163.1 mouse_genomes_project 7 145187359 145190321 - MGP_129S1SvImJ_P0087364 Fuom protein_coding protein_coding MGP_129S1SvImJ_T0087365.1 MGP_129S1SvImJ_G0033163.1 mouse_genomes_project 7 145187361 145187858 - Fuom protein_coding retained_intron MGP_129S1SvImJ_T0087366.1 MGP_129S1SvImJ_G0033163.1 mouse_genomes_project 7 145187363 145190200 - Fuom protein_coding processed_transcript MGP_129S1SvImJ_T0087367.1 MGP_129S1SvImJ_G0033163.1 mouse_genomes_project 7 145187383 145189134 - Fuom protein_coding retained_intron MGP_129S1SvImJ_T0087368.1 MGP_129S1SvImJ_G0033163.1 mouse_genomes_project 7 145187778 145190224 - MGP_129S1SvImJ_P0087368 Fuom protein_coding protein_coding MGP_129S1SvImJ_T0087369.1 MGP_129S1SvImJ_G0033163.1 mouse_genomes_project 7 145188446 145190286 - MGP_129S1SvImJ_P0087369 Fuom protein_coding protein_coding MGP_129S1SvImJ_T0087370.1 MGP_129S1SvImJ_G0033163.1 mouse_genomes_project 7 145188992 145190186 - Fuom protein_coding processed_transcript MGP_129S1SvImJ_T0087371.1 MGP_129S1SvImJ_G0033163.1 mouse_genomes_project 7 145189044 145189846 - Fuom protein_coding processed_transcript MGP_129S1SvImJ_T0087372.1 MGP_129S1SvImJ_G0033163.1 mouse_genomes_project 7 145189053 145190286 - Fuom protein_coding retained_intron MGP_129S1SvImJ_T0087373.1 MGP_129S1SvImJ_G0033163.1 mouse_genomes_project 7 145189168 145190210 - Fuom protein_coding retained_intron MGP_129S1SvImJ_T0015822.1 MGP_129S1SvImJ_G0013911.1 mouse_genomes_project 7 57606815 57607674 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005156.1 MGP_129S1SvImJ_G0004401.1 mouse_genomes_project 7 309686 319017 - Gm44151 antisense antisense MGP_129S1SvImJ_T0086139.1 MGP_129S1SvImJ_G0032909.1 mouse_genomes_project 7 123338932 123355571 - MGP_129S1SvImJ_P0086139 Gp2 protein_coding protein_coding MGP_129S1SvImJ_T0015815.1 MGP_129S1SvImJ_G0013904.1 mouse_genomes_project 7 53544339 53546381 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084860.1 MGP_129S1SvImJ_G0032464.1 mouse_genomes_project 7 87326135 87935442 - MGP_129S1SvImJ_P0084860 protein_coding protein_coding MGP_129S1SvImJ_T0002307.1 MGP_129S1SvImJ_G0002218.1 mouse_genomes_project 7 82584827 82585386 - TEC TEC MGP_129S1SvImJ_T0083799.1 MGP_129S1SvImJ_G0032220.1 mouse_genomes_project 7 45676813 45677855 + MGP_129S1SvImJ_P0083799 Lhb protein_coding protein_coding MGP_129S1SvImJ_T0100072.1 MGP_129S1SvImJ_G0038139.1 mouse_genomes_project 7 94177355 94177500 - Gm23928 snRNA snRNA MGP_129S1SvImJ_T0087381.1 MGP_129S1SvImJ_G0033165.1 mouse_genomes_project 7 145216237 145227198 + MGP_129S1SvImJ_P0087381 Paox protein_coding protein_coding MGP_129S1SvImJ_T0087382.1 MGP_129S1SvImJ_G0033165.1 mouse_genomes_project 7 145216288 145227198 + MGP_129S1SvImJ_P0087382 Paox protein_coding protein_coding MGP_129S1SvImJ_T0085534.1 MGP_129S1SvImJ_G0032701.1 mouse_genomes_project 7 107329283 107330222 + MGP_129S1SvImJ_P0085534 Olfr646 protein_coding protein_coding MGP_129S1SvImJ_T0005158.1 MGP_129S1SvImJ_G0004403.1 mouse_genomes_project 7 995293 1044433 - 9430041J12Rik antisense antisense MGP_129S1SvImJ_T0005159.1 MGP_129S1SvImJ_G0004403.1 mouse_genomes_project 7 995323 1044118 - 9430041J12Rik antisense antisense MGP_129S1SvImJ_T0005160.1 MGP_129S1SvImJ_G0004403.1 mouse_genomes_project 7 995632 1044118 - 9430041J12Rik antisense antisense MGP_129S1SvImJ_T0005161.1 MGP_129S1SvImJ_G0004403.1 mouse_genomes_project 7 1043580 1044118 - 9430041J12Rik antisense pseudogene MGP_129S1SvImJ_T0085510.1 MGP_129S1SvImJ_G0032679.1 mouse_genomes_project 7 106971389 106973479 - MGP_129S1SvImJ_P0085510 Olfr68 protein_coding protein_coding MGP_129S1SvImJ_T0008809.1 MGP_129S1SvImJ_G0007116.1 mouse_genomes_project 7 915674 917402 + 1700095K22Rik lincRNA lincRNA MGP_129S1SvImJ_T0087337.1 MGP_129S1SvImJ_G0033154.1 mouse_genomes_project 7 144969376 144998300 + MGP_129S1SvImJ_P0087337 Kndc1 protein_coding protein_coding MGP_129S1SvImJ_T0087338.1 MGP_129S1SvImJ_G0033154.1 mouse_genomes_project 7 144969376 145017027 + MGP_129S1SvImJ_P0087338 Kndc1 protein_coding protein_coding MGP_129S1SvImJ_T0087339.1 MGP_129S1SvImJ_G0033154.1 mouse_genomes_project 7 144969519 144989023 + MGP_129S1SvImJ_P0087339 Kndc1 protein_coding protein_coding MGP_129S1SvImJ_T0087340.1 MGP_129S1SvImJ_G0033154.1 mouse_genomes_project 7 144998075 145017027 + Kndc1 protein_coding retained_intron MGP_129S1SvImJ_T0081185.1 MGP_129S1SvImJ_G0031519.1 mouse_genomes_project 7 343695 355095 + MGP_129S1SvImJ_P0081185 Cacng6 protein_coding protein_coding MGP_129S1SvImJ_T0081186.1 MGP_129S1SvImJ_G0031519.1 mouse_genomes_project 7 344162 354589 + MGP_129S1SvImJ_P0081186 Cacng6 protein_coding protein_coding MGP_129S1SvImJ_T0086977.1 MGP_129S1SvImJ_G0033078.1 mouse_genomes_project 7 132652957 132665629 + MGP_129S1SvImJ_P0086977 protein_coding protein_coding MGP_129S1SvImJ_T0086978.1 MGP_129S1SvImJ_G0033078.1 mouse_genomes_project 7 132653930 132665322 + MGP_129S1SvImJ_P0086978 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086979.1 MGP_129S1SvImJ_G0033078.1 mouse_genomes_project 7 132653947 132665624 + MGP_129S1SvImJ_P0086979 protein_coding protein_coding MGP_129S1SvImJ_T0086980.1 MGP_129S1SvImJ_G0033078.1 mouse_genomes_project 7 132653965 132665628 + MGP_129S1SvImJ_P0086980 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086981.1 MGP_129S1SvImJ_G0033078.1 mouse_genomes_project 7 132654991 132665628 + protein_coding retained_intron MGP_129S1SvImJ_T0086982.1 MGP_129S1SvImJ_G0033078.1 mouse_genomes_project 7 132654991 132665628 + protein_coding retained_intron MGP_129S1SvImJ_T0086983.1 MGP_129S1SvImJ_G0033078.1 mouse_genomes_project 7 132654991 132665628 + protein_coding retained_intron MGP_129S1SvImJ_T0086984.1 MGP_129S1SvImJ_G0033078.1 mouse_genomes_project 7 132654991 132665628 + protein_coding retained_intron MGP_129S1SvImJ_T0086985.1 MGP_129S1SvImJ_G0033078.1 mouse_genomes_project 7 132654991 132665628 + protein_coding retained_intron MGP_129S1SvImJ_T0086986.1 MGP_129S1SvImJ_G0033078.1 mouse_genomes_project 7 132654991 132665628 + MGP_129S1SvImJ_P0086986 protein_coding protein_coding MGP_129S1SvImJ_T0086987.1 MGP_129S1SvImJ_G0033078.1 mouse_genomes_project 7 132655149 132665284 + MGP_129S1SvImJ_P0086987 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083302.1 MGP_129S1SvImJ_G0032090.1 mouse_genomes_project 7 34861998 34931763 - MGP_129S1SvImJ_P0083302 protein_coding protein_coding MGP_129S1SvImJ_T0083303.1 MGP_129S1SvImJ_G0032090.1 mouse_genomes_project 7 34864092 34931764 - MGP_129S1SvImJ_P0083303 protein_coding protein_coding MGP_129S1SvImJ_T0083304.1 MGP_129S1SvImJ_G0032090.1 mouse_genomes_project 7 34886468 34931919 - MGP_129S1SvImJ_P0083304 protein_coding protein_coding MGP_129S1SvImJ_T0083305.1 MGP_129S1SvImJ_G0032090.1 mouse_genomes_project 7 34886471 34931971 - MGP_129S1SvImJ_P0083305 protein_coding protein_coding MGP_129S1SvImJ_T0083306.1 MGP_129S1SvImJ_G0032090.1 mouse_genomes_project 7 34886500 34897868 - MGP_129S1SvImJ_P0083306 protein_coding protein_coding MGP_129S1SvImJ_T0083307.1 MGP_129S1SvImJ_G0032090.1 mouse_genomes_project 7 34901631 34931919 - MGP_129S1SvImJ_P0083307 protein_coding protein_coding MGP_129S1SvImJ_T0087410.1 MGP_129S1SvImJ_G0033185.1 mouse_genomes_project 7 145766474 145788992 + MGP_129S1SvImJ_P0087410 Olfr53 protein_coding protein_coding MGP_129S1SvImJ_T0084598.1 MGP_129S1SvImJ_G0032405.1 mouse_genomes_project 7 82195865 82207918 + MGP_129S1SvImJ_P0084598 Gdpgp1 protein_coding protein_coding MGP_129S1SvImJ_T0086773.1 MGP_129S1SvImJ_G0033038.1 mouse_genomes_project 7 131791368 131798391 - MGP_129S1SvImJ_P0086773 Zfp689 protein_coding protein_coding MGP_129S1SvImJ_T0086774.1 MGP_129S1SvImJ_G0033038.1 mouse_genomes_project 7 131792987 131798226 - MGP_129S1SvImJ_P0086774 Zfp689 protein_coding protein_coding MGP_129S1SvImJ_T0082286.1 MGP_129S1SvImJ_G0031858.1 mouse_genomes_project 7 23694976 23703105 - MGP_129S1SvImJ_P0082286 Erf protein_coding protein_coding MGP_129S1SvImJ_T0082287.1 MGP_129S1SvImJ_G0031858.1 mouse_genomes_project 7 23697794 23703074 - MGP_129S1SvImJ_P0082287 Erf protein_coding protein_coding MGP_129S1SvImJ_T0010897.1 MGP_129S1SvImJ_G0009013.1 mouse_genomes_project 7 62708551 62708630 - Gm25533 miRNA miRNA MGP_129S1SvImJ_T0085130.1 MGP_129S1SvImJ_G0032545.1 mouse_genomes_project 7 101926254 101956614 - MGP_129S1SvImJ_P0085130 Dgat2 protein_coding protein_coding MGP_129S1SvImJ_T0084880.1 MGP_129S1SvImJ_G0032482.1 mouse_genomes_project 7 88888147 88889155 - MGP_129S1SvImJ_P0084880 Olfr294 protein_coding protein_coding MGP_129S1SvImJ_T0082938.1 MGP_129S1SvImJ_G0032023.1 mouse_genomes_project 7 29490287 29511412 + MGP_129S1SvImJ_P0082938 Prodh2 protein_coding protein_coding MGP_129S1SvImJ_T0082939.1 MGP_129S1SvImJ_G0032023.1 mouse_genomes_project 7 29490323 29506775 + Prodh2 protein_coding processed_transcript MGP_129S1SvImJ_T0082940.1 MGP_129S1SvImJ_G0032023.1 mouse_genomes_project 7 29490323 29504629 + MGP_129S1SvImJ_P0082940 Prodh2 protein_coding protein_coding MGP_129S1SvImJ_T0082941.1 MGP_129S1SvImJ_G0032023.1 mouse_genomes_project 7 29490324 29490953 + Prodh2 protein_coding retained_intron MGP_129S1SvImJ_T0082942.1 MGP_129S1SvImJ_G0032023.1 mouse_genomes_project 7 29490324 29504857 + MGP_129S1SvImJ_P0082942 Prodh2 protein_coding protein_coding MGP_129S1SvImJ_T0082943.1 MGP_129S1SvImJ_G0032023.1 mouse_genomes_project 7 29490346 29504718 + MGP_129S1SvImJ_P0082943 Prodh2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082944.1 MGP_129S1SvImJ_G0032023.1 mouse_genomes_project 7 29490445 29504925 + MGP_129S1SvImJ_P0082944 Prodh2 protein_coding protein_coding MGP_129S1SvImJ_T0082945.1 MGP_129S1SvImJ_G0032023.1 mouse_genomes_project 7 29504956 29511048 + MGP_129S1SvImJ_P0082945 Prodh2 protein_coding protein_coding MGP_129S1SvImJ_T0081268.1 MGP_129S1SvImJ_G0031532.1 mouse_genomes_project 7 692009 698729 - MGP_129S1SvImJ_P0081268 protein_coding protein_coding MGP_129S1SvImJ_T0081481.1 MGP_129S1SvImJ_G0031586.1 mouse_genomes_project 7 2100933 2101946 - MGP_129S1SvImJ_P0081481 Rasl2-9 protein_coding protein_coding MGP_129S1SvImJ_T0008844.1 MGP_129S1SvImJ_G0007147.1 mouse_genomes_project 7 34490914 34497318 - Gm45229 lincRNA lincRNA MGP_129S1SvImJ_T0010932.1 MGP_129S1SvImJ_G0009048.1 mouse_genomes_project 7 104895160 104895256 + Gm22655 miRNA miRNA MGP_129S1SvImJ_T0086557.1 MGP_129S1SvImJ_G0032996.1 mouse_genomes_project 7 131062102 131074005 + MGP_129S1SvImJ_P0086557 Gdpd3 protein_coding protein_coding MGP_129S1SvImJ_T0086558.1 MGP_129S1SvImJ_G0032996.1 mouse_genomes_project 7 131062613 131066593 + Gdpd3 protein_coding retained_intron MGP_129S1SvImJ_T0086559.1 MGP_129S1SvImJ_G0032996.1 mouse_genomes_project 7 131062615 131067042 + Gdpd3 protein_coding retained_intron MGP_129S1SvImJ_T0086560.1 MGP_129S1SvImJ_G0032996.1 mouse_genomes_project 7 131065133 131073987 + MGP_129S1SvImJ_P0086560 Gdpd3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0086561.1 MGP_129S1SvImJ_G0032996.1 mouse_genomes_project 7 131065555 131066416 + Gdpd3 protein_coding retained_intron MGP_129S1SvImJ_T0086562.1 MGP_129S1SvImJ_G0032996.1 mouse_genomes_project 7 131066530 131069553 + Gdpd3 protein_coding retained_intron MGP_129S1SvImJ_T0086563.1 MGP_129S1SvImJ_G0032996.1 mouse_genomes_project 7 131066900 131074009 + Gdpd3 protein_coding retained_intron MGP_129S1SvImJ_T0084072.1 MGP_129S1SvImJ_G0032299.1 mouse_genomes_project 7 50437822 50452649 + MGP_129S1SvImJ_P0084072 Htatip2 protein_coding protein_coding MGP_129S1SvImJ_T0084073.1 MGP_129S1SvImJ_G0032299.1 mouse_genomes_project 7 50437869 50452653 + MGP_129S1SvImJ_P0084073 Htatip2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0002320.1 MGP_129S1SvImJ_G0002231.1 mouse_genomes_project 7 126450897 126453608 + TEC TEC MGP_129S1SvImJ_T0015927.1 MGP_129S1SvImJ_G0014016.1 mouse_genomes_project 7 132414550 132415335 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101336.1 MGP_129S1SvImJ_G0039403.1 mouse_genomes_project 7 102282981 102283129 - Snord15a snoRNA snoRNA MGP_129S1SvImJ_T0082680.1 MGP_129S1SvImJ_G0031961.1 mouse_genomes_project 7 27630059 27642311 + MGP_129S1SvImJ_P0082680 Rinl protein_coding protein_coding MGP_129S1SvImJ_T0008916.1 MGP_129S1SvImJ_G0007200.1 mouse_genomes_project 7 74167707 74168012 - Gm28745 lincRNA lincRNA MGP_129S1SvImJ_T0087664.1 MGP_129S1SvImJ_G0033241.1 mouse_genomes_project 7 146972585 147007228 + MGP_129S1SvImJ_P0087664 Muc5ac protein_coding protein_coding MGP_129S1SvImJ_T0087665.1 MGP_129S1SvImJ_G0033241.1 mouse_genomes_project 7 146972641 147007324 + MGP_129S1SvImJ_P0087665 Muc5ac protein_coding protein_coding MGP_129S1SvImJ_T0087666.1 MGP_129S1SvImJ_G0033241.1 mouse_genomes_project 7 146972680 147006979 + MGP_129S1SvImJ_P0087666 Muc5ac protein_coding protein_coding MGP_129S1SvImJ_T0083018.1 MGP_129S1SvImJ_G0032037.1 mouse_genomes_project 7 29669605 29682453 - MGP_129S1SvImJ_P0083018 Haus5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083019.1 MGP_129S1SvImJ_G0032037.1 mouse_genomes_project 7 29669610 29682514 - MGP_129S1SvImJ_P0083019 Haus5 protein_coding protein_coding MGP_129S1SvImJ_T0083020.1 MGP_129S1SvImJ_G0032037.1 mouse_genomes_project 7 29669832 29672908 - Haus5 protein_coding retained_intron MGP_129S1SvImJ_T0083021.1 MGP_129S1SvImJ_G0032037.1 mouse_genomes_project 7 29673464 29674868 - Haus5 protein_coding retained_intron MGP_129S1SvImJ_T0083022.1 MGP_129S1SvImJ_G0032037.1 mouse_genomes_project 7 29673992 29682480 - Haus5 protein_coding retained_intron MGP_129S1SvImJ_T0083023.1 MGP_129S1SvImJ_G0032037.1 mouse_genomes_project 7 29674752 29676769 - Haus5 protein_coding retained_intron MGP_129S1SvImJ_T0002258.1 MGP_129S1SvImJ_G0002170.1 mouse_genomes_project 7 56740102 56741841 - TEC TEC MGP_129S1SvImJ_T0087416.1 MGP_129S1SvImJ_G0033191.1 mouse_genomes_project 7 145939309 145955283 - MGP_129S1SvImJ_P0087416 Zfp941 protein_coding protein_coding MGP_129S1SvImJ_T0087417.1 MGP_129S1SvImJ_G0033191.1 mouse_genomes_project 7 145941549 145955237 - MGP_129S1SvImJ_P0087417 Zfp941 protein_coding protein_coding MGP_129S1SvImJ_T0087418.1 MGP_129S1SvImJ_G0033191.1 mouse_genomes_project 7 145951568 145955251 - Zfp941 protein_coding processed_transcript MGP_129S1SvImJ_T0081548.1 MGP_129S1SvImJ_G0031619.1 mouse_genomes_project 7 4406779 4423936 - MGP_129S1SvImJ_P0081548 Clcn4 protein_coding protein_coding MGP_129S1SvImJ_T0015883.1 MGP_129S1SvImJ_G0013972.1 mouse_genomes_project 7 101193575 101193892 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005323.1 MGP_129S1SvImJ_G0004517.1 mouse_genomes_project 7 137297279 137299530 + Gm16764 antisense antisense MGP_129S1SvImJ_T0005324.1 MGP_129S1SvImJ_G0004517.1 mouse_genomes_project 7 137297279 137299530 + Gm16764 antisense antisense MGP_129S1SvImJ_T0005325.1 MGP_129S1SvImJ_G0004517.1 mouse_genomes_project 7 137297295 137299530 + Gm16764 antisense antisense MGP_129S1SvImJ_T0084873.1 MGP_129S1SvImJ_G0032476.1 mouse_genomes_project 7 88657776 88658816 - MGP_129S1SvImJ_P0084873 Olfr303 protein_coding protein_coding MGP_129S1SvImJ_T0085456.1 MGP_129S1SvImJ_G0032628.1 mouse_genomes_project 7 105940160 105941111 + MGP_129S1SvImJ_P0085456 Olfr568 protein_coding protein_coding MGP_129S1SvImJ_T0102815.1 MGP_129S1SvImJ_G0040647.1 mouse_genomes_project 7 107785471 107786425 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102792.1 MGP_129S1SvImJ_G0040624.1 mouse_genomes_project 7 88421128 88421999 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0008890.1 MGP_129S1SvImJ_G0007181.1 mouse_genomes_project 7 65194152 65201074 + Gm20670 lincRNA lincRNA MGP_129S1SvImJ_T0082203.1 MGP_129S1SvImJ_G0031838.1 mouse_genomes_project 7 22972805 22977348 + MGP_129S1SvImJ_P0082203 Lypd3 protein_coding protein_coding MGP_129S1SvImJ_T0087881.1 MGP_129S1SvImJ_G0033286.1 mouse_genomes_project 7 149317132 149481241 + MGP_129S1SvImJ_P0087881 Shank2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0087882.1 MGP_129S1SvImJ_G0033286.1 mouse_genomes_project 7 149317132 149481383 + MGP_129S1SvImJ_P0087882 Shank2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0087883.1 MGP_129S1SvImJ_G0033286.1 mouse_genomes_project 7 149341567 149780480 + MGP_129S1SvImJ_P0087883 Shank2 protein_coding protein_coding MGP_129S1SvImJ_T0087884.1 MGP_129S1SvImJ_G0033286.1 mouse_genomes_project 7 149526429 149780480 + MGP_129S1SvImJ_P0087884 Shank2 protein_coding protein_coding MGP_129S1SvImJ_T0087885.1 MGP_129S1SvImJ_G0033286.1 mouse_genomes_project 7 149637284 149778674 + MGP_129S1SvImJ_P0087885 Shank2 protein_coding protein_coding MGP_129S1SvImJ_T0087886.1 MGP_129S1SvImJ_G0033286.1 mouse_genomes_project 7 149637338 149780468 + Shank2 protein_coding retained_intron MGP_129S1SvImJ_T0087887.1 MGP_129S1SvImJ_G0033286.1 mouse_genomes_project 7 149773838 149776663 + Shank2 protein_coding processed_transcript MGP_129S1SvImJ_T0010915.1 MGP_129S1SvImJ_G0009031.1 mouse_genomes_project 7 63158465 63158553 - Mir344i miRNA miRNA MGP_129S1SvImJ_T0083501.1 MGP_129S1SvImJ_G0032143.1 mouse_genomes_project 7 43841352 43847594 + MGP_129S1SvImJ_P0083501 Klk8 protein_coding protein_coding MGP_129S1SvImJ_T0083502.1 MGP_129S1SvImJ_G0032143.1 mouse_genomes_project 7 43841371 43847443 + MGP_129S1SvImJ_P0083502 Klk8 protein_coding protein_coding MGP_129S1SvImJ_T0083503.1 MGP_129S1SvImJ_G0032143.1 mouse_genomes_project 7 43845637 43847598 + Klk8 protein_coding retained_intron MGP_129S1SvImJ_T0100071.1 MGP_129S1SvImJ_G0038138.1 mouse_genomes_project 7 93882446 93882552 - Gm22080 snRNA snRNA MGP_129S1SvImJ_T0010961.1 MGP_129S1SvImJ_G0009077.1 mouse_genomes_project 7 149266607 149266701 + Mir6404 miRNA miRNA MGP_129S1SvImJ_T0010884.1 MGP_129S1SvImJ_G0009000.1 mouse_genomes_project 7 44641052 44641117 + Mir7052 miRNA miRNA MGP_129S1SvImJ_T0005163.1 MGP_129S1SvImJ_G0004405.1 mouse_genomes_project 7 1361998 1384472 - Gm15494 antisense antisense MGP_129S1SvImJ_T0005164.1 MGP_129S1SvImJ_G0004405.1 mouse_genomes_project 7 1364638 1384508 - Gm15494 antisense antisense MGP_129S1SvImJ_T0087441.1 MGP_129S1SvImJ_G0033198.1 mouse_genomes_project 7 146019135 146035867 + MGP_129S1SvImJ_P0087441 Psmd13 protein_coding protein_coding MGP_129S1SvImJ_T0087442.1 MGP_129S1SvImJ_G0033198.1 mouse_genomes_project 7 146019581 146035137 + Psmd13 protein_coding retained_intron MGP_129S1SvImJ_T0087443.1 MGP_129S1SvImJ_G0033198.1 mouse_genomes_project 7 146019596 146024433 + Psmd13 protein_coding processed_transcript MGP_129S1SvImJ_T0087444.1 MGP_129S1SvImJ_G0033198.1 mouse_genomes_project 7 146019605 146024031 + Psmd13 protein_coding processed_transcript MGP_129S1SvImJ_T0087445.1 MGP_129S1SvImJ_G0033198.1 mouse_genomes_project 7 146019619 146026887 + Psmd13 protein_coding processed_transcript MGP_129S1SvImJ_T0087446.1 MGP_129S1SvImJ_G0033198.1 mouse_genomes_project 7 146019634 146024346 + Psmd13 protein_coding retained_intron MGP_129S1SvImJ_T0087447.1 MGP_129S1SvImJ_G0033198.1 mouse_genomes_project 7 146019639 146035458 + MGP_129S1SvImJ_P0087447 Psmd13 protein_coding protein_coding MGP_129S1SvImJ_T0087448.1 MGP_129S1SvImJ_G0033198.1 mouse_genomes_project 7 146019639 146035513 + MGP_129S1SvImJ_P0087448 Psmd13 protein_coding protein_coding MGP_129S1SvImJ_T0087449.1 MGP_129S1SvImJ_G0033198.1 mouse_genomes_project 7 146019639 146035513 + MGP_129S1SvImJ_P0087449 Psmd13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087450.1 MGP_129S1SvImJ_G0033198.1 mouse_genomes_project 7 146020667 146023599 + Psmd13 protein_coding processed_transcript MGP_129S1SvImJ_T0087451.1 MGP_129S1SvImJ_G0033198.1 mouse_genomes_project 7 146026567 146035620 + MGP_129S1SvImJ_P0087451 Psmd13 protein_coding protein_coding MGP_129S1SvImJ_T0087452.1 MGP_129S1SvImJ_G0033198.1 mouse_genomes_project 7 146027556 146035065 + Psmd13 protein_coding retained_intron MGP_129S1SvImJ_T0087453.1 MGP_129S1SvImJ_G0033198.1 mouse_genomes_project 7 146031823 146035868 + MGP_129S1SvImJ_P0087453 Psmd13 protein_coding protein_coding MGP_129S1SvImJ_T0082511.1 MGP_129S1SvImJ_G0031912.1 mouse_genomes_project 7 26130566 26134219 + MGP_129S1SvImJ_P0082511 Sertad3 protein_coding protein_coding MGP_129S1SvImJ_T0100040.1 MGP_129S1SvImJ_G0038107.1 mouse_genomes_project 7 2277175 2277282 - Gm23942 snRNA snRNA MGP_129S1SvImJ_T0081549.1 MGP_129S1SvImJ_G0031620.1 mouse_genomes_project 7 7343823 7360751 - MGP_129S1SvImJ_P0081549 protein_coding protein_coding MGP_129S1SvImJ_T0082841.1 MGP_129S1SvImJ_G0031999.1 mouse_genomes_project 7 29038972 29052132 - MGP_129S1SvImJ_P0082841 Zfp566 protein_coding protein_coding MGP_129S1SvImJ_T0082842.1 MGP_129S1SvImJ_G0031999.1 mouse_genomes_project 7 29042649 29052068 - Zfp566 protein_coding retained_intron MGP_129S1SvImJ_T0081464.1 MGP_129S1SvImJ_G0031576.1 mouse_genomes_project 7 1978639 1991492 + MGP_129S1SvImJ_P0081464 Zfp865 protein_coding protein_coding MGP_129S1SvImJ_T0082019.1 MGP_129S1SvImJ_G0031782.1 mouse_genomes_project 7 17542720 17549048 + MGP_129S1SvImJ_P0082019 Nkpd1 protein_coding protein_coding MGP_129S1SvImJ_T0011712.1 MGP_129S1SvImJ_G0009828.1 mouse_genomes_project 7 97767012 97767306 + Gm23884 misc_RNA misc_RNA MGP_129S1SvImJ_T0087408.1 MGP_129S1SvImJ_G0033183.1 mouse_genomes_project 7 145725720 145730180 + MGP_129S1SvImJ_P0087408 Olfr46 protein_coding protein_coding MGP_129S1SvImJ_T0101334.1 MGP_129S1SvImJ_G0039401.1 mouse_genomes_project 7 101696809 101696931 + Gm23479 snoRNA snoRNA MGP_129S1SvImJ_T0083627.1 MGP_129S1SvImJ_G0032172.1 mouse_genomes_project 7 44786681 44852156 - MGP_129S1SvImJ_P0083627 Myh14 protein_coding protein_coding MGP_129S1SvImJ_T0083628.1 MGP_129S1SvImJ_G0032172.1 mouse_genomes_project 7 44786681 44852156 - MGP_129S1SvImJ_P0083628 Myh14 protein_coding protein_coding MGP_129S1SvImJ_T0082999.1 MGP_129S1SvImJ_G0032030.1 mouse_genomes_project 7 29573322 29575858 + MGP_129S1SvImJ_P0082999 Igflr1 protein_coding protein_coding MGP_129S1SvImJ_T0083000.1 MGP_129S1SvImJ_G0032030.1 mouse_genomes_project 7 29573975 29575855 + MGP_129S1SvImJ_P0083000 Igflr1 protein_coding protein_coding MGP_129S1SvImJ_T0083691.1 MGP_129S1SvImJ_G0032183.1 mouse_genomes_project 7 45071105 45077834 - MGP_129S1SvImJ_P0083691 Ptov1 protein_coding protein_coding MGP_129S1SvImJ_T0084865.1 MGP_129S1SvImJ_G0032469.1 mouse_genomes_project 7 88470449 88491751 - MGP_129S1SvImJ_P0084865 Vmn2r76 protein_coding protein_coding MGP_129S1SvImJ_T0100065.1 MGP_129S1SvImJ_G0038132.1 mouse_genomes_project 7 77335217 77335301 + Gm25282 snRNA snRNA MGP_129S1SvImJ_T0081651.1 MGP_129S1SvImJ_G0031666.1 mouse_genomes_project 7 10494981 10495908 - MGP_129S1SvImJ_P0081651 Vmn1r85 protein_coding protein_coding MGP_129S1SvImJ_T0086550.1 MGP_129S1SvImJ_G0032995.1 mouse_genomes_project 7 131055371 131060614 + MGP_129S1SvImJ_P0086550 Mapk3 protein_coding protein_coding MGP_129S1SvImJ_T0086551.1 MGP_129S1SvImJ_G0032995.1 mouse_genomes_project 7 131055416 131061583 + MGP_129S1SvImJ_P0086551 Mapk3 protein_coding protein_coding MGP_129S1SvImJ_T0086552.1 MGP_129S1SvImJ_G0032995.1 mouse_genomes_project 7 131055421 131060613 + MGP_129S1SvImJ_P0086552 Mapk3 protein_coding protein_coding MGP_129S1SvImJ_T0086553.1 MGP_129S1SvImJ_G0032995.1 mouse_genomes_project 7 131055430 131056778 + Mapk3 protein_coding retained_intron MGP_129S1SvImJ_T0086554.1 MGP_129S1SvImJ_G0032995.1 mouse_genomes_project 7 131055604 131058928 + Mapk3 protein_coding processed_transcript MGP_129S1SvImJ_T0086555.1 MGP_129S1SvImJ_G0032995.1 mouse_genomes_project 7 131056519 131060341 + MGP_129S1SvImJ_P0086555 Mapk3 protein_coding protein_coding MGP_129S1SvImJ_T0086556.1 MGP_129S1SvImJ_G0032995.1 mouse_genomes_project 7 131059045 131060129 + Mapk3 protein_coding retained_intron MGP_129S1SvImJ_T0102787.1 MGP_129S1SvImJ_G0040619.1 mouse_genomes_project 7 88210417 88212020 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0098997.1 MGP_129S1SvImJ_G0037071.1 mouse_genomes_project 7 3486498 3487081 + Gm16306 sense_intronic sense_intronic MGP_129S1SvImJ_T0082801.1 MGP_129S1SvImJ_G0031987.1 mouse_genomes_project 7 28709886 28722319 + MGP_129S1SvImJ_P0082801 Zfp30 protein_coding protein_coding MGP_129S1SvImJ_T0082802.1 MGP_129S1SvImJ_G0031987.1 mouse_genomes_project 7 28709913 28722312 + MGP_129S1SvImJ_P0082802 Zfp30 protein_coding protein_coding MGP_129S1SvImJ_T0082803.1 MGP_129S1SvImJ_G0031987.1 mouse_genomes_project 7 28709938 28719503 + Zfp30 protein_coding retained_intron MGP_129S1SvImJ_T0085149.1 MGP_129S1SvImJ_G0032552.1 mouse_genomes_project 7 102338633 102418246 + MGP_129S1SvImJ_P0085149 Arrb1 protein_coding protein_coding MGP_129S1SvImJ_T0085150.1 MGP_129S1SvImJ_G0032552.1 mouse_genomes_project 7 102338633 102418246 + MGP_129S1SvImJ_P0085150 Arrb1 protein_coding protein_coding MGP_129S1SvImJ_T0085151.1 MGP_129S1SvImJ_G0032552.1 mouse_genomes_project 7 102338829 102415052 + MGP_129S1SvImJ_P0085151 Arrb1 protein_coding protein_coding MGP_129S1SvImJ_T0085152.1 MGP_129S1SvImJ_G0032552.1 mouse_genomes_project 7 102338871 102399242 + MGP_129S1SvImJ_P0085152 Arrb1 protein_coding protein_coding MGP_129S1SvImJ_T0085153.1 MGP_129S1SvImJ_G0032552.1 mouse_genomes_project 7 102342836 102398437 + MGP_129S1SvImJ_P0085153 Arrb1 protein_coding protein_coding MGP_129S1SvImJ_T0085154.1 MGP_129S1SvImJ_G0032552.1 mouse_genomes_project 7 102380698 102398429 + Arrb1 protein_coding processed_transcript MGP_129S1SvImJ_T0085155.1 MGP_129S1SvImJ_G0032552.1 mouse_genomes_project 7 102404883 102412619 + Arrb1 protein_coding retained_intron MGP_129S1SvImJ_T0085156.1 MGP_129S1SvImJ_G0032552.1 mouse_genomes_project 7 102404904 102412633 + Arrb1 protein_coding retained_intron MGP_129S1SvImJ_T0085157.1 MGP_129S1SvImJ_G0032552.1 mouse_genomes_project 7 102404911 102411273 + Arrb1 protein_coding retained_intron MGP_129S1SvImJ_T0085158.1 MGP_129S1SvImJ_G0032552.1 mouse_genomes_project 7 102404913 102411553 + MGP_129S1SvImJ_P0085158 Arrb1 protein_coding protein_coding MGP_129S1SvImJ_T0084037.1 MGP_129S1SvImJ_G0032289.1 mouse_genomes_project 7 49018176 49019299 + MGP_129S1SvImJ_P0084037 Mrgprb8 protein_coding protein_coding MGP_129S1SvImJ_T0087766.1 MGP_129S1SvImJ_G0033261.1 mouse_genomes_project 7 147915803 147923578 - MGP_129S1SvImJ_P0087766 Igf2 protein_coding protein_coding MGP_129S1SvImJ_T0087767.1 MGP_129S1SvImJ_G0033261.1 mouse_genomes_project 7 147915806 147926769 - MGP_129S1SvImJ_P0087767 Igf2 protein_coding protein_coding MGP_129S1SvImJ_T0087768.1 MGP_129S1SvImJ_G0033261.1 mouse_genomes_project 7 147915806 147923548 - MGP_129S1SvImJ_P0087768 Igf2 protein_coding protein_coding MGP_129S1SvImJ_T0087769.1 MGP_129S1SvImJ_G0033261.1 mouse_genomes_project 7 147915806 147928594 - MGP_129S1SvImJ_P0087769 Igf2 protein_coding protein_coding MGP_129S1SvImJ_T0087770.1 MGP_129S1SvImJ_G0033261.1 mouse_genomes_project 7 147915880 147919113 - Igf2 protein_coding processed_transcript MGP_129S1SvImJ_T0087771.1 MGP_129S1SvImJ_G0033261.1 mouse_genomes_project 7 147919838 147934137 - MGP_129S1SvImJ_P0087771 Igf2 protein_coding protein_coding MGP_129S1SvImJ_T0087772.1 MGP_129S1SvImJ_G0033261.1 mouse_genomes_project 7 147920131 147929159 - MGP_129S1SvImJ_P0087772 Igf2 protein_coding protein_coding MGP_129S1SvImJ_T0087773.1 MGP_129S1SvImJ_G0033261.1 mouse_genomes_project 7 147920434 147922100 - MGP_129S1SvImJ_P0087773 Igf2 protein_coding protein_coding MGP_129S1SvImJ_T0087774.1 MGP_129S1SvImJ_G0033261.1 mouse_genomes_project 7 147921524 147928494 - Igf2 protein_coding retained_intron MGP_129S1SvImJ_T0086577.1 MGP_129S1SvImJ_G0032999.1 mouse_genomes_project 7 131084225 131090843 - MGP_129S1SvImJ_P0086577 Ppp4c protein_coding protein_coding MGP_129S1SvImJ_T0086578.1 MGP_129S1SvImJ_G0032999.1 mouse_genomes_project 7 131084227 131090687 - MGP_129S1SvImJ_P0086578 Ppp4c protein_coding protein_coding MGP_129S1SvImJ_T0086579.1 MGP_129S1SvImJ_G0032999.1 mouse_genomes_project 7 131084518 131086770 - MGP_129S1SvImJ_P0086579 Ppp4c protein_coding protein_coding MGP_129S1SvImJ_T0086580.1 MGP_129S1SvImJ_G0032999.1 mouse_genomes_project 7 131084588 131085699 - MGP_129S1SvImJ_P0086580 Ppp4c protein_coding protein_coding MGP_129S1SvImJ_T0086581.1 MGP_129S1SvImJ_G0032999.1 mouse_genomes_project 7 131084648 131090840 - MGP_129S1SvImJ_P0086581 Ppp4c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086582.1 MGP_129S1SvImJ_G0032999.1 mouse_genomes_project 7 131085579 131087404 - MGP_129S1SvImJ_P0086582 Ppp4c protein_coding protein_coding MGP_129S1SvImJ_T0086583.1 MGP_129S1SvImJ_G0032999.1 mouse_genomes_project 7 131085827 131090494 - MGP_129S1SvImJ_P0086583 Ppp4c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086584.1 MGP_129S1SvImJ_G0032999.1 mouse_genomes_project 7 131085930 131087377 - Ppp4c protein_coding retained_intron MGP_129S1SvImJ_T0086585.1 MGP_129S1SvImJ_G0032999.1 mouse_genomes_project 7 131086023 131090813 - Ppp4c protein_coding retained_intron MGP_129S1SvImJ_T0086586.1 MGP_129S1SvImJ_G0032999.1 mouse_genomes_project 7 131088872 131090843 - Ppp4c protein_coding retained_intron MGP_129S1SvImJ_T0086587.1 MGP_129S1SvImJ_G0032999.1 mouse_genomes_project 7 131088896 131090829 - Ppp4c protein_coding retained_intron MGP_129S1SvImJ_T0010945.1 MGP_129S1SvImJ_G0009061.1 mouse_genomes_project 7 132704152 132704219 - Mir3103 miRNA miRNA MGP_129S1SvImJ_T0086152.1 MGP_129S1SvImJ_G0032914.1 mouse_genomes_project 7 123516069 123550228 + MGP_129S1SvImJ_P0086152 Acsm1 protein_coding protein_coding MGP_129S1SvImJ_T0086153.1 MGP_129S1SvImJ_G0032914.1 mouse_genomes_project 7 123527946 123578615 + MGP_129S1SvImJ_P0086153 Acsm1 protein_coding protein_coding MGP_129S1SvImJ_T0086154.1 MGP_129S1SvImJ_G0032914.1 mouse_genomes_project 7 123527978 123578335 + MGP_129S1SvImJ_P0086154 Acsm1 protein_coding protein_coding MGP_129S1SvImJ_T0083282.1 MGP_129S1SvImJ_G0032087.1 mouse_genomes_project 7 34782842 34787525 - MGP_129S1SvImJ_P0083282 Faap24 protein_coding protein_coding MGP_129S1SvImJ_T0083283.1 MGP_129S1SvImJ_G0032087.1 mouse_genomes_project 7 34782995 34787402 - Faap24 protein_coding retained_intron MGP_129S1SvImJ_T0083284.1 MGP_129S1SvImJ_G0032087.1 mouse_genomes_project 7 34783386 34787397 - MGP_129S1SvImJ_P0083284 Faap24 protein_coding protein_coding MGP_129S1SvImJ_T0015727.1 MGP_129S1SvImJ_G0013816.1 mouse_genomes_project 7 11488152 11488366 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102738.1 MGP_129S1SvImJ_G0040570.1 mouse_genomes_project 7 41514022 41514262 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0081426.1 MGP_129S1SvImJ_G0031562.1 mouse_genomes_project 7 1723822 1728922 - MGP_129S1SvImJ_P0081426 Tmem238 protein_coding protein_coding MGP_129S1SvImJ_T0081427.1 MGP_129S1SvImJ_G0031562.1 mouse_genomes_project 7 1724437 1728339 - MGP_129S1SvImJ_P0081427 Tmem238 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0005656.1 MGP_129S1SvImJ_G0004764.1 mouse_genomes_project 7 67061183 67062170 - Gm20684 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0083246.1 MGP_129S1SvImJ_G0032079.1 mouse_genomes_project 7 33994823 34152728 - MGP_129S1SvImJ_P0083246 Chst8 protein_coding protein_coding MGP_129S1SvImJ_T0083247.1 MGP_129S1SvImJ_G0032079.1 mouse_genomes_project 7 33994823 34152728 - MGP_129S1SvImJ_P0083247 Chst8 protein_coding protein_coding MGP_129S1SvImJ_T0083248.1 MGP_129S1SvImJ_G0032079.1 mouse_genomes_project 7 33995114 34152728 - MGP_129S1SvImJ_P0083248 Chst8 protein_coding protein_coding MGP_129S1SvImJ_T0083249.1 MGP_129S1SvImJ_G0032079.1 mouse_genomes_project 7 33996174 34152753 - Chst8 protein_coding processed_transcript MGP_129S1SvImJ_T0083250.1 MGP_129S1SvImJ_G0032079.1 mouse_genomes_project 7 34022828 34025989 - Chst8 protein_coding processed_transcript MGP_129S1SvImJ_T0083251.1 MGP_129S1SvImJ_G0032079.1 mouse_genomes_project 7 34023630 34152714 - Chst8 protein_coding processed_transcript MGP_129S1SvImJ_T0085173.1 MGP_129S1SvImJ_G0032561.1 mouse_genomes_project 7 102860377 102888766 + MGP_129S1SvImJ_P0085173 Chrdl2 protein_coding protein_coding MGP_129S1SvImJ_T0085174.1 MGP_129S1SvImJ_G0032561.1 mouse_genomes_project 7 102863886 102888768 + MGP_129S1SvImJ_P0085174 Chrdl2 protein_coding protein_coding MGP_129S1SvImJ_T0085175.1 MGP_129S1SvImJ_G0032561.1 mouse_genomes_project 7 102876064 102888766 + MGP_129S1SvImJ_P0085175 Chrdl2 protein_coding protein_coding MGP_129S1SvImJ_T0083857.1 MGP_129S1SvImJ_G0032232.1 mouse_genomes_project 7 45913731 45915314 - MGP_129S1SvImJ_P0083857 Fgf21 protein_coding protein_coding MGP_129S1SvImJ_T0015833.1 MGP_129S1SvImJ_G0013922.1 mouse_genomes_project 7 66347324 66347898 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082180.1 MGP_129S1SvImJ_G0031832.1 mouse_genomes_project 7 22858836 22866744 + MGP_129S1SvImJ_P0082180 Irgq protein_coding protein_coding MGP_129S1SvImJ_T0005219.1 MGP_129S1SvImJ_G0004444.1 mouse_genomes_project 7 34472696 34474262 - Gm45091 antisense antisense MGP_129S1SvImJ_T0010935.1 MGP_129S1SvImJ_G0009051.1 mouse_genomes_project 7 116313484 116313613 + Gm44462 miRNA miRNA MGP_129S1SvImJ_T0101761.1 MGP_129S1SvImJ_G0039745.1 mouse_genomes_project 7 9414194 9416909 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0083600.1 MGP_129S1SvImJ_G0032168.1 mouse_genomes_project 7 44707777 44725571 - MGP_129S1SvImJ_P0083600 Pold1 protein_coding protein_coding MGP_129S1SvImJ_T0083601.1 MGP_129S1SvImJ_G0032168.1 mouse_genomes_project 7 44707780 44708949 - Pold1 protein_coding retained_intron MGP_129S1SvImJ_T0083602.1 MGP_129S1SvImJ_G0032168.1 mouse_genomes_project 7 44707782 44725573 - Pold1 protein_coding retained_intron MGP_129S1SvImJ_T0083603.1 MGP_129S1SvImJ_G0032168.1 mouse_genomes_project 7 44707785 44710116 - Pold1 protein_coding retained_intron MGP_129S1SvImJ_T0083604.1 MGP_129S1SvImJ_G0032168.1 mouse_genomes_project 7 44707817 44725562 - MGP_129S1SvImJ_P0083604 Pold1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083605.1 MGP_129S1SvImJ_G0032168.1 mouse_genomes_project 7 44708311 44709220 - Pold1 protein_coding retained_intron MGP_129S1SvImJ_T0083606.1 MGP_129S1SvImJ_G0032168.1 mouse_genomes_project 7 44708926 44710983 - Pold1 protein_coding retained_intron MGP_129S1SvImJ_T0083607.1 MGP_129S1SvImJ_G0032168.1 mouse_genomes_project 7 44712544 44713446 - Pold1 protein_coding retained_intron MGP_129S1SvImJ_T0083608.1 MGP_129S1SvImJ_G0032168.1 mouse_genomes_project 7 44717120 44725457 - MGP_129S1SvImJ_P0083608 Pold1 protein_coding protein_coding MGP_129S1SvImJ_T0085624.1 MGP_129S1SvImJ_G0032754.1 mouse_genomes_project 7 108812126 108816155 + MGP_129S1SvImJ_P0085624 Smpd1 protein_coding protein_coding MGP_129S1SvImJ_T0081300.1 MGP_129S1SvImJ_G0031538.1 mouse_genomes_project 7 1060700 1065859 + MGP_129S1SvImJ_P0081300 Leng8 protein_coding protein_coding MGP_129S1SvImJ_T0081301.1 MGP_129S1SvImJ_G0031538.1 mouse_genomes_project 7 1060710 1063667 + MGP_129S1SvImJ_P0081301 Leng8 protein_coding protein_coding MGP_129S1SvImJ_T0081302.1 MGP_129S1SvImJ_G0031538.1 mouse_genomes_project 7 1060710 1071853 + MGP_129S1SvImJ_P0081302 Leng8 protein_coding protein_coding MGP_129S1SvImJ_T0081303.1 MGP_129S1SvImJ_G0031538.1 mouse_genomes_project 7 1060721 1064120 + MGP_129S1SvImJ_P0081303 Leng8 protein_coding protein_coding MGP_129S1SvImJ_T0081304.1 MGP_129S1SvImJ_G0031538.1 mouse_genomes_project 7 1060727 1071848 + MGP_129S1SvImJ_P0081304 Leng8 protein_coding protein_coding MGP_129S1SvImJ_T0081305.1 MGP_129S1SvImJ_G0031538.1 mouse_genomes_project 7 1060732 1065784 + MGP_129S1SvImJ_P0081305 Leng8 protein_coding protein_coding MGP_129S1SvImJ_T0081306.1 MGP_129S1SvImJ_G0031538.1 mouse_genomes_project 7 1060745 1071849 + Leng8 protein_coding retained_intron MGP_129S1SvImJ_T0081307.1 MGP_129S1SvImJ_G0031538.1 mouse_genomes_project 7 1061229 1064761 + MGP_129S1SvImJ_P0081307 Leng8 protein_coding protein_coding MGP_129S1SvImJ_T0081308.1 MGP_129S1SvImJ_G0031538.1 mouse_genomes_project 7 1065834 1066605 + Leng8 protein_coding retained_intron MGP_129S1SvImJ_T0081309.1 MGP_129S1SvImJ_G0031538.1 mouse_genomes_project 7 1068395 1069318 + Leng8 protein_coding retained_intron MGP_129S1SvImJ_T0087389.1 MGP_129S1SvImJ_G0033167.1 mouse_genomes_project 7 145245015 145249265 - MGP_129S1SvImJ_P0087389 Sprn protein_coding protein_coding MGP_129S1SvImJ_T0087390.1 MGP_129S1SvImJ_G0033167.1 mouse_genomes_project 7 145245351 145247929 - Sprn protein_coding processed_transcript MGP_129S1SvImJ_T0008817.1 MGP_129S1SvImJ_G0007122.1 mouse_genomes_project 7 17293175 17295519 - Gm26802 lincRNA lincRNA MGP_129S1SvImJ_T0011711.1 MGP_129S1SvImJ_G0009827.1 mouse_genomes_project 7 93594407 93594614 - Gm27660 misc_RNA misc_RNA MGP_129S1SvImJ_T0085457.1 MGP_129S1SvImJ_G0032629.1 mouse_genomes_project 7 105950969 105951914 - MGP_129S1SvImJ_P0085457 Olfr569 protein_coding protein_coding MGP_129S1SvImJ_T0102781.1 MGP_129S1SvImJ_G0040613.1 mouse_genomes_project 7 87753724 87754631 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0098630.1 MGP_129S1SvImJ_G0036715.1 mouse_genomes_project 7 3610922 3611030 + n-R5s150 rRNA rRNA MGP_129S1SvImJ_T0085599.1 MGP_129S1SvImJ_G0032737.1 mouse_genomes_project 7 108264914 108265853 + MGP_129S1SvImJ_P0085599 Olfr677 protein_coding protein_coding MGP_129S1SvImJ_T0081684.1 MGP_129S1SvImJ_G0031676.1 mouse_genomes_project 7 11018028 11075029 + MGP_129S1SvImJ_P0081684 protein_coding protein_coding MGP_129S1SvImJ_T0081569.1 MGP_129S1SvImJ_G0031636.1 mouse_genomes_project 7 9239875 9240793 + MGP_129S1SvImJ_P0081569 Vmn1r75 protein_coding protein_coding MGP_129S1SvImJ_T0084158.1 MGP_129S1SvImJ_G0032317.1 mouse_genomes_project 7 57045383 57331555 + MGP_129S1SvImJ_P0084158 Oca2 protein_coding protein_coding MGP_129S1SvImJ_T0084159.1 MGP_129S1SvImJ_G0032317.1 mouse_genomes_project 7 57045384 57060509 + MGP_129S1SvImJ_P0084159 Oca2 protein_coding protein_coding MGP_129S1SvImJ_T0084160.1 MGP_129S1SvImJ_G0032317.1 mouse_genomes_project 7 57045400 57331302 + MGP_129S1SvImJ_P0084160 Oca2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084161.1 MGP_129S1SvImJ_G0032317.1 mouse_genomes_project 7 57045404 57088815 + MGP_129S1SvImJ_P0084161 Oca2 protein_coding protein_coding MGP_129S1SvImJ_T0084162.1 MGP_129S1SvImJ_G0032317.1 mouse_genomes_project 7 57045431 57331550 + MGP_129S1SvImJ_P0084162 Oca2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084163.1 MGP_129S1SvImJ_G0032317.1 mouse_genomes_project 7 57118005 57136301 + Oca2 protein_coding processed_transcript MGP_129S1SvImJ_T0082181.1 MGP_129S1SvImJ_G0031833.1 mouse_genomes_project 7 22869801 22874616 - MGP_129S1SvImJ_P0082181 Pinlyp protein_coding protein_coding MGP_129S1SvImJ_T0081194.1 MGP_129S1SvImJ_G0031522.1 mouse_genomes_project 7 542848 545771 + MGP_129S1SvImJ_P0081194 Ndufa3 protein_coding protein_coding MGP_129S1SvImJ_T0081195.1 MGP_129S1SvImJ_G0031522.1 mouse_genomes_project 7 542855 545596 + Ndufa3 protein_coding retained_intron MGP_129S1SvImJ_T0081196.1 MGP_129S1SvImJ_G0031522.1 mouse_genomes_project 7 542860 543181 + Ndufa3 protein_coding retained_intron MGP_129S1SvImJ_T0081197.1 MGP_129S1SvImJ_G0031522.1 mouse_genomes_project 7 542861 545572 + MGP_129S1SvImJ_P0081197 Ndufa3 protein_coding protein_coding MGP_129S1SvImJ_T0081198.1 MGP_129S1SvImJ_G0031522.1 mouse_genomes_project 7 542866 545607 + MGP_129S1SvImJ_P0081198 Ndufa3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081199.1 MGP_129S1SvImJ_G0031522.1 mouse_genomes_project 7 543092 545529 + MGP_129S1SvImJ_P0081199 Ndufa3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0005306.1 MGP_129S1SvImJ_G0004502.1 mouse_genomes_project 7 126211638 126234955 - Gm15489 antisense antisense MGP_129S1SvImJ_T0102724.1 MGP_129S1SvImJ_G0040556.1 mouse_genomes_project 7 32771776 32773045 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085792.1 MGP_129S1SvImJ_G0032834.1 mouse_genomes_project 7 112273000 112274002 - MGP_129S1SvImJ_P0085792 Olfr518 protein_coding protein_coding MGP_129S1SvImJ_T0082793.1 MGP_129S1SvImJ_G0031984.1 mouse_genomes_project 7 28449319 28467703 + MGP_129S1SvImJ_P0082793 protein_coding protein_coding MGP_129S1SvImJ_T0082794.1 MGP_129S1SvImJ_G0031984.1 mouse_genomes_project 7 28466361 28467701 + MGP_129S1SvImJ_P0082794 protein_coding protein_coding MGP_129S1SvImJ_T0010956.1 MGP_129S1SvImJ_G0009072.1 mouse_genomes_project 7 147197024 147197087 + Mir3104 miRNA miRNA MGP_129S1SvImJ_T0102810.1 MGP_129S1SvImJ_G0040642.1 mouse_genomes_project 7 107179118 107180073 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0086975.1 MGP_129S1SvImJ_G0033077.1 mouse_genomes_project 7 132643743 132644498 + Armc5 protein_coding processed_transcript MGP_129S1SvImJ_T0086976.1 MGP_129S1SvImJ_G0033077.1 mouse_genomes_project 7 132643758 132651196 + MGP_129S1SvImJ_P0086976 Armc5 protein_coding protein_coding MGP_129S1SvImJ_T0086632.1 MGP_129S1SvImJ_G0033005.1 mouse_genomes_project 7 131168372 131171778 + MGP_129S1SvImJ_P0086632 Hirip3 protein_coding protein_coding MGP_129S1SvImJ_T0086633.1 MGP_129S1SvImJ_G0033005.1 mouse_genomes_project 7 131168839 131169805 + Hirip3 protein_coding retained_intron MGP_129S1SvImJ_T0086634.1 MGP_129S1SvImJ_G0033005.1 mouse_genomes_project 7 131168864 131170126 + Hirip3 protein_coding retained_intron MGP_129S1SvImJ_T0086635.1 MGP_129S1SvImJ_G0033005.1 mouse_genomes_project 7 131168867 131170572 + Hirip3 protein_coding processed_transcript MGP_129S1SvImJ_T0086636.1 MGP_129S1SvImJ_G0033005.1 mouse_genomes_project 7 131168881 131169832 + MGP_129S1SvImJ_P0086636 Hirip3 protein_coding protein_coding MGP_129S1SvImJ_T0086637.1 MGP_129S1SvImJ_G0033005.1 mouse_genomes_project 7 131170243 131170929 + Hirip3 protein_coding retained_intron MGP_129S1SvImJ_T0086638.1 MGP_129S1SvImJ_G0033005.1 mouse_genomes_project 7 131170816 131171319 + Hirip3 protein_coding retained_intron MGP_129S1SvImJ_T0086081.1 MGP_129S1SvImJ_G0032896.1 mouse_genomes_project 7 121942541 122069310 - MGP_129S1SvImJ_P0086081 Smg1 protein_coding protein_coding MGP_129S1SvImJ_T0086082.1 MGP_129S1SvImJ_G0032896.1 mouse_genomes_project 7 121949458 122038837 - MGP_129S1SvImJ_P0086082 Smg1 protein_coding protein_coding MGP_129S1SvImJ_T0086083.1 MGP_129S1SvImJ_G0032896.1 mouse_genomes_project 7 121955978 121956996 - MGP_129S1SvImJ_P0086083 Smg1 protein_coding protein_coding MGP_129S1SvImJ_T0086084.1 MGP_129S1SvImJ_G0032896.1 mouse_genomes_project 7 122014679 122069310 - Smg1 protein_coding retained_intron MGP_129S1SvImJ_T0086085.1 MGP_129S1SvImJ_G0032896.1 mouse_genomes_project 7 122021164 122069300 - MGP_129S1SvImJ_P0086085 Smg1 protein_coding protein_coding MGP_129S1SvImJ_T0086086.1 MGP_129S1SvImJ_G0032896.1 mouse_genomes_project 7 122023724 122069022 - Smg1 protein_coding retained_intron MGP_129S1SvImJ_T0101345.1 MGP_129S1SvImJ_G0039412.1 mouse_genomes_project 7 114589306 114589474 - Gm23262 snoRNA snoRNA MGP_129S1SvImJ_T0008886.1 MGP_129S1SvImJ_G0007178.1 mouse_genomes_project 7 65084378 65092225 + Gm45052 lincRNA lincRNA MGP_129S1SvImJ_T0008832.1 MGP_129S1SvImJ_G0007136.1 mouse_genomes_project 7 29174345 29176605 + lincRNA lincRNA MGP_129S1SvImJ_T0081687.1 MGP_129S1SvImJ_G0031679.1 mouse_genomes_project 7 11378280 11453856 - MGP_129S1SvImJ_P0081687 Sult2a2 protein_coding protein_coding MGP_129S1SvImJ_T0018402.1 MGP_129S1SvImJ_G0015671.1 mouse_genomes_project 7 56846722 56857766 - Gm34121 processed_transcript lincRNA MGP_129S1SvImJ_T0018403.1 MGP_129S1SvImJ_G0015671.1 mouse_genomes_project 7 56854183 56857731 - Gm34121 processed_transcript retained_intron MGP_129S1SvImJ_T0005277.1 MGP_129S1SvImJ_G0004484.1 mouse_genomes_project 7 99504126 99508579 - Gm44633 antisense antisense MGP_129S1SvImJ_T0009021.1 MGP_129S1SvImJ_G0007266.1 mouse_genomes_project 7 129575428 129577581 + 4930571K23Rik lincRNA lincRNA MGP_129S1SvImJ_T0009022.1 MGP_129S1SvImJ_G0007266.1 mouse_genomes_project 7 129575579 129577575 + 4930571K23Rik lincRNA lincRNA MGP_129S1SvImJ_T0100051.1 MGP_129S1SvImJ_G0038118.1 mouse_genomes_project 7 39255409 39255520 + Gm26327 snRNA snRNA MGP_129S1SvImJ_T0083264.1 MGP_129S1SvImJ_G0032083.1 mouse_genomes_project 7 34544454 34559221 + MGP_129S1SvImJ_P0083264 Slc7a10 protein_coding protein_coding MGP_129S1SvImJ_T0083265.1 MGP_129S1SvImJ_G0032083.1 mouse_genomes_project 7 34544454 34553556 + MGP_129S1SvImJ_P0083265 Slc7a10 protein_coding protein_coding MGP_129S1SvImJ_T0083266.1 MGP_129S1SvImJ_G0032083.1 mouse_genomes_project 7 34544490 34559020 + MGP_129S1SvImJ_P0083266 Slc7a10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083267.1 MGP_129S1SvImJ_G0032083.1 mouse_genomes_project 7 34544551 34556057 + MGP_129S1SvImJ_P0083267 Slc7a10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083268.1 MGP_129S1SvImJ_G0032083.1 mouse_genomes_project 7 34557020 34559001 + MGP_129S1SvImJ_P0083268 Slc7a10 protein_coding protein_coding MGP_129S1SvImJ_T0082047.1 MGP_129S1SvImJ_G0031792.1 mouse_genomes_project 7 17735962 17739021 - MGP_129S1SvImJ_P0082047 Apoe protein_coding protein_coding MGP_129S1SvImJ_T0082048.1 MGP_129S1SvImJ_G0031792.1 mouse_genomes_project 7 17736119 17738907 - MGP_129S1SvImJ_P0082048 Apoe protein_coding protein_coding MGP_129S1SvImJ_T0082049.1 MGP_129S1SvImJ_G0031792.1 mouse_genomes_project 7 17736124 17738262 - MGP_129S1SvImJ_P0082049 Apoe protein_coding protein_coding MGP_129S1SvImJ_T0082050.1 MGP_129S1SvImJ_G0031792.1 mouse_genomes_project 7 17736124 17738863 - MGP_129S1SvImJ_P0082050 Apoe protein_coding protein_coding MGP_129S1SvImJ_T0082051.1 MGP_129S1SvImJ_G0031792.1 mouse_genomes_project 7 17736124 17738907 - MGP_129S1SvImJ_P0082051 Apoe protein_coding protein_coding MGP_129S1SvImJ_T0082052.1 MGP_129S1SvImJ_G0031792.1 mouse_genomes_project 7 17736472 17738893 - MGP_129S1SvImJ_P0082052 Apoe protein_coding protein_coding MGP_129S1SvImJ_T0082053.1 MGP_129S1SvImJ_G0031792.1 mouse_genomes_project 7 17736473 17738476 - MGP_129S1SvImJ_P0082053 Apoe protein_coding protein_coding MGP_129S1SvImJ_T0082054.1 MGP_129S1SvImJ_G0031792.1 mouse_genomes_project 7 17736696 17738102 - MGP_129S1SvImJ_P0082054 Apoe protein_coding protein_coding MGP_129S1SvImJ_T0082055.1 MGP_129S1SvImJ_G0031792.1 mouse_genomes_project 7 17737092 17738905 - MGP_129S1SvImJ_P0082055 Apoe protein_coding protein_coding MGP_129S1SvImJ_T0082056.1 MGP_129S1SvImJ_G0031792.1 mouse_genomes_project 7 17737108 17738122 - MGP_129S1SvImJ_P0082056 Apoe protein_coding protein_coding MGP_129S1SvImJ_T0102714.1 MGP_129S1SvImJ_G0040547.1 mouse_genomes_project 7 15670863 15734080 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0084566.1 MGP_129S1SvImJ_G0032396.1 mouse_genomes_project 7 81705195 81706743 - MGP_129S1SvImJ_P0084566 Mesp1 protein_coding protein_coding MGP_129S1SvImJ_T0015775.1 MGP_129S1SvImJ_G0013864.1 mouse_genomes_project 7 33203676 33204263 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0083921.1 MGP_129S1SvImJ_G0032252.1 mouse_genomes_project 7 46197527 46199007 + Kdelr1 protein_coding processed_transcript MGP_129S1SvImJ_T0083922.1 MGP_129S1SvImJ_G0032252.1 mouse_genomes_project 7 46197653 46208957 + MGP_129S1SvImJ_P0083922 Kdelr1 protein_coding protein_coding MGP_129S1SvImJ_T0083923.1 MGP_129S1SvImJ_G0032252.1 mouse_genomes_project 7 46206100 46209299 + Kdelr1 protein_coding processed_transcript MGP_129S1SvImJ_T0087734.1 MGP_129S1SvImJ_G0033258.1 mouse_genomes_project 7 147748112 147765382 - MGP_129S1SvImJ_P0087734 protein_coding protein_coding MGP_129S1SvImJ_T0087735.1 MGP_129S1SvImJ_G0033258.1 mouse_genomes_project 7 147749788 147754010 - protein_coding processed_transcript MGP_129S1SvImJ_T0008909.1 MGP_129S1SvImJ_G0007193.1 mouse_genomes_project 7 71803617 71822400 - Gm28258 lincRNA lincRNA MGP_129S1SvImJ_T0100056.1 MGP_129S1SvImJ_G0038123.1 mouse_genomes_project 7 52843958 52844114 - Gm22211 snRNA snRNA MGP_129S1SvImJ_T0082266.1 MGP_129S1SvImJ_G0031853.1 mouse_genomes_project 7 23499301 23503750 + Zfp574 protein_coding processed_transcript MGP_129S1SvImJ_T0082267.1 MGP_129S1SvImJ_G0031853.1 mouse_genomes_project 7 23499380 23504109 + Zfp574 protein_coding processed_transcript MGP_129S1SvImJ_T0082268.1 MGP_129S1SvImJ_G0031853.1 mouse_genomes_project 7 23503938 23510226 + MGP_129S1SvImJ_P0082268 Zfp574 protein_coding protein_coding MGP_129S1SvImJ_T0082269.1 MGP_129S1SvImJ_G0031853.1 mouse_genomes_project 7 23504017 23509214 + MGP_129S1SvImJ_P0082269 Zfp574 protein_coding protein_coding MGP_129S1SvImJ_T0018372.1 MGP_129S1SvImJ_G0015661.1 mouse_genomes_project 7 29653235 29682457 - Gm21982 processed_transcript retained_intron MGP_129S1SvImJ_T0086272.1 MGP_129S1SvImJ_G0032949.1 mouse_genomes_project 7 126131124 126146131 + MGP_129S1SvImJ_P0086272 Ubfd1 protein_coding protein_coding MGP_129S1SvImJ_T0086273.1 MGP_129S1SvImJ_G0032949.1 mouse_genomes_project 7 126131157 126141587 + Ubfd1 protein_coding retained_intron MGP_129S1SvImJ_T0086274.1 MGP_129S1SvImJ_G0032949.1 mouse_genomes_project 7 126131389 126135365 + Ubfd1 protein_coding retained_intron MGP_129S1SvImJ_T0086275.1 MGP_129S1SvImJ_G0032949.1 mouse_genomes_project 7 126131396 126132929 + Ubfd1 protein_coding processed_transcript MGP_129S1SvImJ_T0086276.1 MGP_129S1SvImJ_G0032949.1 mouse_genomes_project 7 126132848 126142575 + MGP_129S1SvImJ_P0086276 Ubfd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0102701.1 MGP_129S1SvImJ_G0040534.1 mouse_genomes_project 7 11891770 11895025 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0087413.1 MGP_129S1SvImJ_G0033188.1 mouse_genomes_project 7 145826698 145830066 + MGP_129S1SvImJ_P0087413 Olfr541 protein_coding protein_coding MGP_129S1SvImJ_T0083494.1 MGP_129S1SvImJ_G0032140.1 mouse_genomes_project 7 43815139 43820907 + MGP_129S1SvImJ_P0083494 Klk11 protein_coding protein_coding MGP_129S1SvImJ_T0083495.1 MGP_129S1SvImJ_G0032140.1 mouse_genomes_project 7 43817972 43820597 + Klk11 protein_coding retained_intron MGP_129S1SvImJ_T0083496.1 MGP_129S1SvImJ_G0032140.1 mouse_genomes_project 7 43817972 43820902 + MGP_129S1SvImJ_P0083496 Klk11 protein_coding protein_coding MGP_129S1SvImJ_T0083497.1 MGP_129S1SvImJ_G0032140.1 mouse_genomes_project 7 43818123 43820704 + Klk11 protein_coding processed_transcript MGP_129S1SvImJ_T0083498.1 MGP_129S1SvImJ_G0032140.1 mouse_genomes_project 7 43818123 43820704 + Klk11 protein_coding processed_transcript MGP_129S1SvImJ_T0085133.1 MGP_129S1SvImJ_G0032547.1 mouse_genomes_project 7 102053490 102127384 + MGP_129S1SvImJ_P0085133 Map6 protein_coding protein_coding MGP_129S1SvImJ_T0085134.1 MGP_129S1SvImJ_G0032547.1 mouse_genomes_project 7 102053490 102127384 + MGP_129S1SvImJ_P0085134 Map6 protein_coding protein_coding MGP_129S1SvImJ_T0085135.1 MGP_129S1SvImJ_G0032547.1 mouse_genomes_project 7 102053532 102109835 + Map6 protein_coding retained_intron MGP_129S1SvImJ_T0085136.1 MGP_129S1SvImJ_G0032547.1 mouse_genomes_project 7 102054389 102127385 + MGP_129S1SvImJ_P0085136 Map6 protein_coding protein_coding MGP_129S1SvImJ_T0085137.1 MGP_129S1SvImJ_G0032547.1 mouse_genomes_project 7 102110682 102111938 + Map6 protein_coding processed_transcript MGP_129S1SvImJ_T0087706.1 MGP_129S1SvImJ_G0033255.1 mouse_genomes_project 7 147687522 147694654 + Syt8 protein_coding processed_transcript MGP_129S1SvImJ_T0087707.1 MGP_129S1SvImJ_G0033255.1 mouse_genomes_project 7 147687618 147693747 + Syt8 protein_coding processed_transcript MGP_129S1SvImJ_T0087708.1 MGP_129S1SvImJ_G0033255.1 mouse_genomes_project 7 147687649 147695175 + MGP_129S1SvImJ_P0087708 Syt8 protein_coding protein_coding MGP_129S1SvImJ_T0087709.1 MGP_129S1SvImJ_G0033255.1 mouse_genomes_project 7 147687673 147695107 + Syt8 protein_coding retained_intron MGP_129S1SvImJ_T0087710.1 MGP_129S1SvImJ_G0033255.1 mouse_genomes_project 7 147687673 147695107 + MGP_129S1SvImJ_P0087710 Syt8 protein_coding protein_coding MGP_129S1SvImJ_T0087711.1 MGP_129S1SvImJ_G0033255.1 mouse_genomes_project 7 147687673 147695107 + MGP_129S1SvImJ_P0087711 Syt8 protein_coding protein_coding MGP_129S1SvImJ_T0087712.1 MGP_129S1SvImJ_G0033255.1 mouse_genomes_project 7 147691619 147695084 + MGP_129S1SvImJ_P0087712 Syt8 protein_coding protein_coding MGP_129S1SvImJ_T0087713.1 MGP_129S1SvImJ_G0033255.1 mouse_genomes_project 7 147692910 147693321 + MGP_129S1SvImJ_P0087713 Syt8 protein_coding protein_coding MGP_129S1SvImJ_T0087714.1 MGP_129S1SvImJ_G0033255.1 mouse_genomes_project 7 147693199 147694763 + Syt8 protein_coding retained_intron MGP_129S1SvImJ_T0087715.1 MGP_129S1SvImJ_G0033255.1 mouse_genomes_project 7 147693793 147695091 + Syt8 protein_coding retained_intron MGP_129S1SvImJ_T0085576.1 MGP_129S1SvImJ_G0032717.1 mouse_genomes_project 7 107624989 107652197 - MGP_129S1SvImJ_P0085576 Trim30d protein_coding protein_coding MGP_129S1SvImJ_T0085577.1 MGP_129S1SvImJ_G0032717.1 mouse_genomes_project 7 107625169 107635152 - MGP_129S1SvImJ_P0085577 Trim30d protein_coding protein_coding MGP_129S1SvImJ_T0010843.1 MGP_129S1SvImJ_G0008959.1 mouse_genomes_project 7 95579 95661 + Mir292 miRNA miRNA MGP_129S1SvImJ_T0082874.1 MGP_129S1SvImJ_G0032008.1 mouse_genomes_project 7 29214358 29216645 - MGP_129S1SvImJ_P0082874 Ovol3 protein_coding protein_coding MGP_129S1SvImJ_T0101966.1 MGP_129S1SvImJ_G0039846.1 mouse_genomes_project 7 14375286 14383542 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101967.1 MGP_129S1SvImJ_G0039846.1 mouse_genomes_project 7 14375644 14378127 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0087403.1 MGP_129S1SvImJ_G0033178.1 mouse_genomes_project 7 145525042 145525972 - MGP_129S1SvImJ_P0087403 Olfr532 protein_coding protein_coding MGP_129S1SvImJ_T0082584.1 MGP_129S1SvImJ_G0031932.1 mouse_genomes_project 7 26938315 26948350 + MGP_129S1SvImJ_P0082584 Fbl protein_coding protein_coding MGP_129S1SvImJ_T0010853.1 MGP_129S1SvImJ_G0008969.1 mouse_genomes_project 7 3902278 3902362 + Mir3099 miRNA miRNA MGP_129S1SvImJ_T0081369.1 MGP_129S1SvImJ_G0031549.1 mouse_genomes_project 7 1443307 1452826 - MGP_129S1SvImJ_P0081369 Dnaaf3 protein_coding protein_coding MGP_129S1SvImJ_T0086952.1 MGP_129S1SvImJ_G0033069.1 mouse_genomes_project 7 132401757 132409107 + MGP_129S1SvImJ_P0086952 Trim72 protein_coding protein_coding MGP_129S1SvImJ_T0086953.1 MGP_129S1SvImJ_G0033069.1 mouse_genomes_project 7 132402186 132408749 + MGP_129S1SvImJ_P0086953 Trim72 protein_coding protein_coding MGP_129S1SvImJ_T0085511.1 MGP_129S1SvImJ_G0032680.1 mouse_genomes_project 7 106971835 106974400 - MGP_129S1SvImJ_P0085511 Olfr69 protein_coding protein_coding MGP_129S1SvImJ_T0085159.1 MGP_129S1SvImJ_G0032553.1 mouse_genomes_project 7 102435510 102438532 - MGP_129S1SvImJ_P0085159 Tpbgl protein_coding protein_coding MGP_129S1SvImJ_T0083798.1 MGP_129S1SvImJ_G0032219.1 mouse_genomes_project 7 45669280 45673108 + MGP_129S1SvImJ_P0083798 Ntf5 protein_coding protein_coding MGP_129S1SvImJ_T0081362.1 MGP_129S1SvImJ_G0031548.1 mouse_genomes_project 7 1438214 1439674 - Tnni3 protein_coding retained_intron MGP_129S1SvImJ_T0081363.1 MGP_129S1SvImJ_G0031548.1 mouse_genomes_project 7 1438214 1442903 - MGP_129S1SvImJ_P0081363 Tnni3 protein_coding protein_coding MGP_129S1SvImJ_T0081364.1 MGP_129S1SvImJ_G0031548.1 mouse_genomes_project 7 1438217 1440944 - Tnni3 protein_coding retained_intron MGP_129S1SvImJ_T0081365.1 MGP_129S1SvImJ_G0031548.1 mouse_genomes_project 7 1440814 1443169 - MGP_129S1SvImJ_P0081365 Tnni3 protein_coding protein_coding MGP_129S1SvImJ_T0081366.1 MGP_129S1SvImJ_G0031548.1 mouse_genomes_project 7 1440853 1444604 - MGP_129S1SvImJ_P0081366 Tnni3 protein_coding protein_coding MGP_129S1SvImJ_T0081367.1 MGP_129S1SvImJ_G0031548.1 mouse_genomes_project 7 1441418 1442817 - Tnni3 protein_coding retained_intron MGP_129S1SvImJ_T0081368.1 MGP_129S1SvImJ_G0031548.1 mouse_genomes_project 7 1441715 1442867 - Tnni3 protein_coding retained_intron MGP_129S1SvImJ_T0083597.1 MGP_129S1SvImJ_G0032167.1 mouse_genomes_project 7 44701021 44707103 - MGP_129S1SvImJ_P0083597 Spib protein_coding protein_coding MGP_129S1SvImJ_T0083598.1 MGP_129S1SvImJ_G0032167.1 mouse_genomes_project 7 44702993 44706306 - MGP_129S1SvImJ_P0083598 Spib protein_coding protein_coding MGP_129S1SvImJ_T0083599.1 MGP_129S1SvImJ_G0032167.1 mouse_genomes_project 7 44702993 44707085 - MGP_129S1SvImJ_P0083599 Spib protein_coding protein_coding MGP_129S1SvImJ_T0083741.1 MGP_129S1SvImJ_G0032210.1 mouse_genomes_project 7 45457628 45476855 + MGP_129S1SvImJ_P0083741 Tead2 protein_coding protein_coding MGP_129S1SvImJ_T0083742.1 MGP_129S1SvImJ_G0032210.1 mouse_genomes_project 7 45457666 45462800 + Tead2 protein_coding retained_intron MGP_129S1SvImJ_T0083743.1 MGP_129S1SvImJ_G0032210.1 mouse_genomes_project 7 45457685 45460082 + Tead2 protein_coding retained_intron MGP_129S1SvImJ_T0083744.1 MGP_129S1SvImJ_G0032210.1 mouse_genomes_project 7 45457698 45467712 + MGP_129S1SvImJ_P0083744 Tead2 protein_coding protein_coding MGP_129S1SvImJ_T0083745.1 MGP_129S1SvImJ_G0032210.1 mouse_genomes_project 7 45457727 45476855 + MGP_129S1SvImJ_P0083745 Tead2 protein_coding protein_coding MGP_129S1SvImJ_T0083746.1 MGP_129S1SvImJ_G0032210.1 mouse_genomes_project 7 45458548 45461045 + MGP_129S1SvImJ_P0083746 Tead2 protein_coding protein_coding MGP_129S1SvImJ_T0083747.1 MGP_129S1SvImJ_G0032210.1 mouse_genomes_project 7 45459086 45462853 + Tead2 protein_coding retained_intron MGP_129S1SvImJ_T0083748.1 MGP_129S1SvImJ_G0032210.1 mouse_genomes_project 7 45459086 45476871 + MGP_129S1SvImJ_P0083748 Tead2 protein_coding protein_coding MGP_129S1SvImJ_T0083749.1 MGP_129S1SvImJ_G0032210.1 mouse_genomes_project 7 45459914 45465661 + Tead2 protein_coding processed_transcript MGP_129S1SvImJ_T0083750.1 MGP_129S1SvImJ_G0032210.1 mouse_genomes_project 7 45461783 45462581 + Tead2 protein_coding retained_intron MGP_129S1SvImJ_T0083751.1 MGP_129S1SvImJ_G0032210.1 mouse_genomes_project 7 45462321 45463076 + Tead2 protein_coding processed_transcript MGP_129S1SvImJ_T0083752.1 MGP_129S1SvImJ_G0032210.1 mouse_genomes_project 7 45475383 45476322 + Tead2 protein_coding processed_transcript MGP_129S1SvImJ_T0102818.1 MGP_129S1SvImJ_G0040650.1 mouse_genomes_project 7 108295727 108298896 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015897.1 MGP_129S1SvImJ_G0013986.1 mouse_genomes_project 7 110540864 110542311 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085860.1 MGP_129S1SvImJ_G0032857.1 mouse_genomes_project 7 113787251 114121511 - MGP_129S1SvImJ_P0085860 Sbf2 protein_coding protein_coding MGP_129S1SvImJ_T0085861.1 MGP_129S1SvImJ_G0032857.1 mouse_genomes_project 7 113787260 114121509 - MGP_129S1SvImJ_P0085861 Sbf2 protein_coding protein_coding MGP_129S1SvImJ_T0085862.1 MGP_129S1SvImJ_G0032857.1 mouse_genomes_project 7 113788636 114121350 - MGP_129S1SvImJ_P0085862 Sbf2 protein_coding protein_coding MGP_129S1SvImJ_T0085863.1 MGP_129S1SvImJ_G0032857.1 mouse_genomes_project 7 113801473 113822130 - Sbf2 protein_coding retained_intron MGP_129S1SvImJ_T0085864.1 MGP_129S1SvImJ_G0032857.1 mouse_genomes_project 7 113810665 113844713 - MGP_129S1SvImJ_P0085864 Sbf2 protein_coding protein_coding MGP_129S1SvImJ_T0085865.1 MGP_129S1SvImJ_G0032857.1 mouse_genomes_project 7 113821028 113834689 - Sbf2 protein_coding retained_intron MGP_129S1SvImJ_T0085866.1 MGP_129S1SvImJ_G0032857.1 mouse_genomes_project 7 113823171 113846991 - MGP_129S1SvImJ_P0085866 Sbf2 protein_coding protein_coding MGP_129S1SvImJ_T0085867.1 MGP_129S1SvImJ_G0032857.1 mouse_genomes_project 7 113861530 114121503 - Sbf2 protein_coding retained_intron MGP_129S1SvImJ_T0085868.1 MGP_129S1SvImJ_G0032857.1 mouse_genomes_project 7 113861841 114121485 - Sbf2 protein_coding retained_intron MGP_129S1SvImJ_T0085869.1 MGP_129S1SvImJ_G0032857.1 mouse_genomes_project 7 113911253 113931825 - MGP_129S1SvImJ_P0085869 Sbf2 protein_coding protein_coding MGP_129S1SvImJ_T0085870.1 MGP_129S1SvImJ_G0032857.1 mouse_genomes_project 7 113914810 114121471 - Sbf2 protein_coding retained_intron MGP_129S1SvImJ_T0085871.1 MGP_129S1SvImJ_G0032857.1 mouse_genomes_project 7 113930818 114121494 - MGP_129S1SvImJ_P0085871 Sbf2 protein_coding protein_coding MGP_129S1SvImJ_T0085872.1 MGP_129S1SvImJ_G0032857.1 mouse_genomes_project 7 113931005 113953932 - MGP_129S1SvImJ_P0085872 Sbf2 protein_coding protein_coding MGP_129S1SvImJ_T0085873.1 MGP_129S1SvImJ_G0032857.1 mouse_genomes_project 7 113953875 114121350 - MGP_129S1SvImJ_P0085873 Sbf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085449.1 MGP_129S1SvImJ_G0032622.1 mouse_genomes_project 7 105741852 105751585 - MGP_129S1SvImJ_P0085449 Trim68 protein_coding protein_coding MGP_129S1SvImJ_T0081578.1 MGP_129S1SvImJ_G0031644.1 mouse_genomes_project 7 9747733 9748690 - MGP_129S1SvImJ_P0081578 Vmn1r84 protein_coding protein_coding MGP_129S1SvImJ_T0005230.1 MGP_129S1SvImJ_G0004450.1 mouse_genomes_project 7 43990373 44037144 - antisense antisense MGP_129S1SvImJ_T0083803.1 MGP_129S1SvImJ_G0032222.1 mouse_genomes_project 7 45690837 45719781 + MGP_129S1SvImJ_P0083803 Gys1 protein_coding protein_coding MGP_129S1SvImJ_T0083804.1 MGP_129S1SvImJ_G0032222.1 mouse_genomes_project 7 45690870 45718992 + MGP_129S1SvImJ_P0083804 Gys1 protein_coding protein_coding MGP_129S1SvImJ_T0083805.1 MGP_129S1SvImJ_G0032222.1 mouse_genomes_project 7 45710741 45714964 + Gys1 protein_coding processed_transcript MGP_129S1SvImJ_T0083806.1 MGP_129S1SvImJ_G0032222.1 mouse_genomes_project 7 45710867 45714988 + Gys1 protein_coding processed_transcript MGP_129S1SvImJ_T0083807.1 MGP_129S1SvImJ_G0032222.1 mouse_genomes_project 7 45711390 45718484 + Gys1 protein_coding retained_intron MGP_129S1SvImJ_T0083808.1 MGP_129S1SvImJ_G0032222.1 mouse_genomes_project 7 45714161 45715253 + Gys1 protein_coding retained_intron MGP_129S1SvImJ_T0081254.1 MGP_129S1SvImJ_G0031530.1 mouse_genomes_project 7 633305 636249 + MGP_129S1SvImJ_P0081254 Rps9 protein_coding protein_coding MGP_129S1SvImJ_T0081255.1 MGP_129S1SvImJ_G0031530.1 mouse_genomes_project 7 633350 636247 + MGP_129S1SvImJ_P0081255 Rps9 protein_coding protein_coding MGP_129S1SvImJ_T0081256.1 MGP_129S1SvImJ_G0031530.1 mouse_genomes_project 7 633353 634190 + Rps9 protein_coding retained_intron MGP_129S1SvImJ_T0081257.1 MGP_129S1SvImJ_G0031530.1 mouse_genomes_project 7 633354 634034 + MGP_129S1SvImJ_P0081257 Rps9 protein_coding protein_coding MGP_129S1SvImJ_T0081258.1 MGP_129S1SvImJ_G0031530.1 mouse_genomes_project 7 633360 634786 + Rps9 protein_coding retained_intron MGP_129S1SvImJ_T0081259.1 MGP_129S1SvImJ_G0031530.1 mouse_genomes_project 7 633364 636212 + MGP_129S1SvImJ_P0081259 Rps9 protein_coding protein_coding MGP_129S1SvImJ_T0081260.1 MGP_129S1SvImJ_G0031530.1 mouse_genomes_project 7 633632 636228 + MGP_129S1SvImJ_P0081260 Rps9 protein_coding protein_coding MGP_129S1SvImJ_T0081261.1 MGP_129S1SvImJ_G0031530.1 mouse_genomes_project 7 633637 635737 + MGP_129S1SvImJ_P0081261 Rps9 protein_coding protein_coding MGP_129S1SvImJ_T0081262.1 MGP_129S1SvImJ_G0031530.1 mouse_genomes_project 7 633676 636246 + MGP_129S1SvImJ_P0081262 Rps9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081263.1 MGP_129S1SvImJ_G0031530.1 mouse_genomes_project 7 634972 635584 + Rps9 protein_coding retained_intron MGP_129S1SvImJ_T0084089.1 MGP_129S1SvImJ_G0032303.1 mouse_genomes_project 7 51291070 51292411 + MGP_129S1SvImJ_P0084089 4933405O20Rik protein_coding protein_coding MGP_129S1SvImJ_T0081783.1 MGP_129S1SvImJ_G0031711.1 mouse_genomes_project 7 14168114 14190011 - MGP_129S1SvImJ_P0081783 Npas1 protein_coding protein_coding MGP_129S1SvImJ_T0085583.1 MGP_129S1SvImJ_G0032722.1 mouse_genomes_project 7 107728602 107729529 - MGP_129S1SvImJ_P0085583 Olfr655 protein_coding protein_coding MGP_129S1SvImJ_T0081529.1 MGP_129S1SvImJ_G0031608.1 mouse_genomes_project 7 3575626 3582239 - MGP_129S1SvImJ_P0081529 Olfr5 protein_coding protein_coding MGP_129S1SvImJ_T0084888.1 MGP_129S1SvImJ_G0032489.1 mouse_genomes_project 7 89586700 89648401 + MGP_129S1SvImJ_P0084888 Nox4 protein_coding protein_coding MGP_129S1SvImJ_T0084889.1 MGP_129S1SvImJ_G0032489.1 mouse_genomes_project 7 89587341 89651746 + Nox4 protein_coding retained_intron MGP_129S1SvImJ_T0084890.1 MGP_129S1SvImJ_G0032489.1 mouse_genomes_project 7 89587341 89632371 + Nox4 protein_coding processed_transcript MGP_129S1SvImJ_T0084891.1 MGP_129S1SvImJ_G0032489.1 mouse_genomes_project 7 89587341 89737951 + MGP_129S1SvImJ_P0084891 Nox4 protein_coding protein_coding MGP_129S1SvImJ_T0084892.1 MGP_129S1SvImJ_G0032489.1 mouse_genomes_project 7 89587341 89740799 + MGP_129S1SvImJ_P0084892 Nox4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084893.1 MGP_129S1SvImJ_G0032489.1 mouse_genomes_project 7 89587341 89734439 + MGP_129S1SvImJ_P0084893 Nox4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084894.1 MGP_129S1SvImJ_G0032489.1 mouse_genomes_project 7 89587341 89740799 + MGP_129S1SvImJ_P0084894 Nox4 protein_coding protein_coding MGP_129S1SvImJ_T0084895.1 MGP_129S1SvImJ_G0032489.1 mouse_genomes_project 7 89587504 89740428 + MGP_129S1SvImJ_P0084895 Nox4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0015848.1 MGP_129S1SvImJ_G0013937.1 mouse_genomes_project 7 77025569 77025773 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082890.1 MGP_129S1SvImJ_G0032012.1 mouse_genomes_project 7 29293254 29298851 + MGP_129S1SvImJ_P0082890 Alkbh6 protein_coding protein_coding MGP_129S1SvImJ_T0082891.1 MGP_129S1SvImJ_G0032012.1 mouse_genomes_project 7 29293314 29298701 + MGP_129S1SvImJ_P0082891 Alkbh6 protein_coding protein_coding MGP_129S1SvImJ_T0082892.1 MGP_129S1SvImJ_G0032012.1 mouse_genomes_project 7 29293314 29298708 + MGP_129S1SvImJ_P0082892 Alkbh6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082893.1 MGP_129S1SvImJ_G0032012.1 mouse_genomes_project 7 29293325 29298850 + Alkbh6 protein_coding retained_intron MGP_129S1SvImJ_T0082894.1 MGP_129S1SvImJ_G0032012.1 mouse_genomes_project 7 29293332 29297051 + Alkbh6 protein_coding retained_intron MGP_129S1SvImJ_T0082895.1 MGP_129S1SvImJ_G0032012.1 mouse_genomes_project 7 29293346 29296963 + Alkbh6 protein_coding retained_intron MGP_129S1SvImJ_T0082896.1 MGP_129S1SvImJ_G0032012.1 mouse_genomes_project 7 29293350 29295596 + Alkbh6 protein_coding processed_transcript MGP_129S1SvImJ_T0082897.1 MGP_129S1SvImJ_G0032012.1 mouse_genomes_project 7 29293391 29297239 + Alkbh6 protein_coding retained_intron MGP_129S1SvImJ_T0082898.1 MGP_129S1SvImJ_G0032012.1 mouse_genomes_project 7 29294315 29297204 + Alkbh6 protein_coding retained_intron MGP_129S1SvImJ_T0082899.1 MGP_129S1SvImJ_G0032012.1 mouse_genomes_project 7 29295672 29296906 + Alkbh6 protein_coding retained_intron MGP_129S1SvImJ_T0082900.1 MGP_129S1SvImJ_G0032012.1 mouse_genomes_project 7 29297217 29298851 + Alkbh6 protein_coding processed_transcript MGP_129S1SvImJ_T0102765.1 MGP_129S1SvImJ_G0040597.1 mouse_genomes_project 7 48923857 48924475 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0101299.1 MGP_129S1SvImJ_G0039366.1 mouse_genomes_project 7 13583266 13583375 - Snord23 snoRNA snoRNA MGP_129S1SvImJ_T0102732.1 MGP_129S1SvImJ_G0040564.1 mouse_genomes_project 7 33204689 33213139 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015909.1 MGP_129S1SvImJ_G0013998.1 mouse_genomes_project 7 126202182 126202596 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0083609.1 MGP_129S1SvImJ_G0032169.1 mouse_genomes_project 7 44726123 44730194 - MGP_129S1SvImJ_P0083609 Nr1h2 protein_coding protein_coding MGP_129S1SvImJ_T0083610.1 MGP_129S1SvImJ_G0032169.1 mouse_genomes_project 7 44726123 44730457 - MGP_129S1SvImJ_P0083610 Nr1h2 protein_coding protein_coding MGP_129S1SvImJ_T0083611.1 MGP_129S1SvImJ_G0032169.1 mouse_genomes_project 7 44726124 44730456 - MGP_129S1SvImJ_P0083611 Nr1h2 protein_coding protein_coding MGP_129S1SvImJ_T0083612.1 MGP_129S1SvImJ_G0032169.1 mouse_genomes_project 7 44726142 44730431 - MGP_129S1SvImJ_P0083612 Nr1h2 protein_coding protein_coding MGP_129S1SvImJ_T0083613.1 MGP_129S1SvImJ_G0032169.1 mouse_genomes_project 7 44726159 44730431 - MGP_129S1SvImJ_P0083613 Nr1h2 protein_coding protein_coding MGP_129S1SvImJ_T0083614.1 MGP_129S1SvImJ_G0032169.1 mouse_genomes_project 7 44726809 44730419 - Nr1h2 protein_coding retained_intron MGP_129S1SvImJ_T0083615.1 MGP_129S1SvImJ_G0032169.1 mouse_genomes_project 7 44726881 44728131 - Nr1h2 protein_coding retained_intron MGP_129S1SvImJ_T0083616.1 MGP_129S1SvImJ_G0032169.1 mouse_genomes_project 7 44727564 44730459 - Nr1h2 protein_coding retained_intron MGP_129S1SvImJ_T0083617.1 MGP_129S1SvImJ_G0032169.1 mouse_genomes_project 7 44727647 44728379 - Nr1h2 protein_coding retained_intron MGP_129S1SvImJ_T0083618.1 MGP_129S1SvImJ_G0032169.1 mouse_genomes_project 7 44728716 44729095 - Nr1h2 protein_coding retained_intron MGP_129S1SvImJ_T0083619.1 MGP_129S1SvImJ_G0032169.1 mouse_genomes_project 7 44729001 44730431 - Nr1h2 protein_coding retained_intron MGP_129S1SvImJ_T0083620.1 MGP_129S1SvImJ_G0032169.1 mouse_genomes_project 7 44729100 44729720 - Nr1h2 protein_coding retained_intron MGP_129S1SvImJ_T0083621.1 MGP_129S1SvImJ_G0032169.1 mouse_genomes_project 7 44729141 44730407 - Nr1h2 protein_coding retained_intron MGP_129S1SvImJ_T0102741.1 MGP_129S1SvImJ_G0040573.1 mouse_genomes_project 7 42240256 42247557 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0101323.1 MGP_129S1SvImJ_G0039390.1 mouse_genomes_project 7 60777654 60777721 - Snord64 snoRNA snoRNA MGP_129S1SvImJ_T0005242.1 MGP_129S1SvImJ_G0004459.1 mouse_genomes_project 7 65475548 65483906 - Gm20457 antisense antisense MGP_129S1SvImJ_T0101343.1 MGP_129S1SvImJ_G0039410.1 mouse_genomes_project 7 113486427 113486560 + Gm25636 snoRNA snoRNA MGP_129S1SvImJ_T0085012.1 MGP_129S1SvImJ_G0032522.1 mouse_genomes_project 7 100058996 100079619 + MGP_129S1SvImJ_P0085012 Alg8 protein_coding protein_coding MGP_129S1SvImJ_T0085013.1 MGP_129S1SvImJ_G0032522.1 mouse_genomes_project 7 100074048 100079185 + Alg8 protein_coding retained_intron MGP_129S1SvImJ_T0085014.1 MGP_129S1SvImJ_G0032522.1 mouse_genomes_project 7 100074305 100079519 + Alg8 protein_coding processed_transcript MGP_129S1SvImJ_T0085015.1 MGP_129S1SvImJ_G0032522.1 mouse_genomes_project 7 100074633 100079082 + Alg8 protein_coding processed_transcript MGP_129S1SvImJ_T0085016.1 MGP_129S1SvImJ_G0032522.1 mouse_genomes_project 7 100075453 100079243 + Alg8 protein_coding retained_intron MGP_129S1SvImJ_T0085017.1 MGP_129S1SvImJ_G0032522.1 mouse_genomes_project 7 100078210 100079326 + Alg8 protein_coding retained_intron MGP_129S1SvImJ_T0083706.1 MGP_129S1SvImJ_G0032193.1 mouse_genomes_project 7 45228767 45241421 - Scaf1 protein_coding retained_intron MGP_129S1SvImJ_T0083707.1 MGP_129S1SvImJ_G0032193.1 mouse_genomes_project 7 45228767 45243811 - MGP_129S1SvImJ_P0083707 Scaf1 protein_coding protein_coding MGP_129S1SvImJ_T0083708.1 MGP_129S1SvImJ_G0032193.1 mouse_genomes_project 7 45228767 45241852 - MGP_129S1SvImJ_P0083708 Scaf1 protein_coding protein_coding MGP_129S1SvImJ_T0083709.1 MGP_129S1SvImJ_G0032193.1 mouse_genomes_project 7 45236143 45243579 - Scaf1 protein_coding processed_transcript MGP_129S1SvImJ_T0083710.1 MGP_129S1SvImJ_G0032193.1 mouse_genomes_project 7 45239605 45241009 - Scaf1 protein_coding retained_intron MGP_129S1SvImJ_T0083711.1 MGP_129S1SvImJ_G0032193.1 mouse_genomes_project 7 45240699 45243305 - MGP_129S1SvImJ_P0083711 Scaf1 protein_coding protein_coding MGP_129S1SvImJ_T0083712.1 MGP_129S1SvImJ_G0032193.1 mouse_genomes_project 7 45241651 45242384 - Scaf1 protein_coding processed_transcript MGP_129S1SvImJ_T0085936.1 MGP_129S1SvImJ_G0032870.1 mouse_genomes_project 7 115999276 116175769 + MGP_129S1SvImJ_P0085936 Parva protein_coding protein_coding MGP_129S1SvImJ_T0085937.1 MGP_129S1SvImJ_G0032870.1 mouse_genomes_project 7 115999473 116177830 + MGP_129S1SvImJ_P0085937 Parva protein_coding protein_coding MGP_129S1SvImJ_T0085938.1 MGP_129S1SvImJ_G0032870.1 mouse_genomes_project 7 115999672 116134444 + MGP_129S1SvImJ_P0085938 Parva protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085939.1 MGP_129S1SvImJ_G0032870.1 mouse_genomes_project 7 116077761 116128120 + Parva protein_coding processed_transcript MGP_129S1SvImJ_T0085940.1 MGP_129S1SvImJ_G0032870.1 mouse_genomes_project 7 116096293 116175110 + MGP_129S1SvImJ_P0085940 Parva protein_coding protein_coding MGP_129S1SvImJ_T0085941.1 MGP_129S1SvImJ_G0032870.1 mouse_genomes_project 7 116150743 116161197 + Parva protein_coding processed_transcript MGP_129S1SvImJ_T0085533.1 MGP_129S1SvImJ_G0032700.1 mouse_genomes_project 7 107308223 107309171 - MGP_129S1SvImJ_P0085533 Olfr645 protein_coding protein_coding MGP_129S1SvImJ_T0101355.1 MGP_129S1SvImJ_G0039422.1 mouse_genomes_project 7 131882065 131882195 + Snora30 snoRNA snoRNA MGP_129S1SvImJ_T0083470.1 MGP_129S1SvImJ_G0032130.1 mouse_genomes_project 7 43543143 43552343 - MGP_129S1SvImJ_P0083470 Cd33 protein_coding protein_coding MGP_129S1SvImJ_T0083471.1 MGP_129S1SvImJ_G0032130.1 mouse_genomes_project 7 43546926 43552029 - MGP_129S1SvImJ_P0083471 Cd33 protein_coding protein_coding MGP_129S1SvImJ_T0083472.1 MGP_129S1SvImJ_G0032130.1 mouse_genomes_project 7 43547457 43551606 - MGP_129S1SvImJ_P0083472 Cd33 protein_coding protein_coding MGP_129S1SvImJ_T0083473.1 MGP_129S1SvImJ_G0032130.1 mouse_genomes_project 7 43549283 43552015 - Cd33 protein_coding retained_intron MGP_129S1SvImJ_T0083474.1 MGP_129S1SvImJ_G0032130.1 mouse_genomes_project 7 43550970 43551882 - Cd33 protein_coding processed_transcript MGP_129S1SvImJ_T0018456.1 MGP_129S1SvImJ_G0015694.1 mouse_genomes_project 7 132837593 132839637 - Gm15503 processed_transcript retained_intron MGP_129S1SvImJ_T0018457.1 MGP_129S1SvImJ_G0015694.1 mouse_genomes_project 7 132839063 132840991 - Gm15503 processed_transcript sense_intronic MGP_129S1SvImJ_T0102772.1 MGP_129S1SvImJ_G0040604.1 mouse_genomes_project 7 87218921 87219441 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0005197.1 MGP_129S1SvImJ_G0004426.1 mouse_genomes_project 7 26698170 26701163 + antisense antisense MGP_129S1SvImJ_T0083952.1 MGP_129S1SvImJ_G0032261.1 mouse_genomes_project 7 46556842 46601801 - MGP_129S1SvImJ_P0083952 Ush1c protein_coding protein_coding MGP_129S1SvImJ_T0083953.1 MGP_129S1SvImJ_G0032261.1 mouse_genomes_project 7 46556849 46601812 - MGP_129S1SvImJ_P0083953 Ush1c protein_coding protein_coding MGP_129S1SvImJ_T0083954.1 MGP_129S1SvImJ_G0032261.1 mouse_genomes_project 7 46556849 46601799 - MGP_129S1SvImJ_P0083954 Ush1c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083955.1 MGP_129S1SvImJ_G0032261.1 mouse_genomes_project 7 46557123 46601773 - MGP_129S1SvImJ_P0083955 Ush1c protein_coding protein_coding MGP_129S1SvImJ_T0083956.1 MGP_129S1SvImJ_G0032261.1 mouse_genomes_project 7 46557142 46601807 - MGP_129S1SvImJ_P0083956 Ush1c protein_coding protein_coding MGP_129S1SvImJ_T0083957.1 MGP_129S1SvImJ_G0032261.1 mouse_genomes_project 7 46557143 46593624 - MGP_129S1SvImJ_P0083957 Ush1c protein_coding protein_coding MGP_129S1SvImJ_T0083958.1 MGP_129S1SvImJ_G0032261.1 mouse_genomes_project 7 46557162 46563560 - Ush1c protein_coding retained_intron MGP_129S1SvImJ_T0083959.1 MGP_129S1SvImJ_G0032261.1 mouse_genomes_project 7 46557214 46601773 - MGP_129S1SvImJ_P0083959 Ush1c protein_coding unknown_likely_coding MGP_129S1SvImJ_T0083960.1 MGP_129S1SvImJ_G0032261.1 mouse_genomes_project 7 46562516 46583057 - Ush1c protein_coding processed_transcript MGP_129S1SvImJ_T0084441.1 MGP_129S1SvImJ_G0032376.1 mouse_genomes_project 7 77948845 78886772 + MGP_129S1SvImJ_P0084441 Agbl1 protein_coding protein_coding MGP_129S1SvImJ_T0084442.1 MGP_129S1SvImJ_G0032376.1 mouse_genomes_project 7 78133877 78443268 + MGP_129S1SvImJ_P0084442 Agbl1 protein_coding protein_coding MGP_129S1SvImJ_T0084443.1 MGP_129S1SvImJ_G0032376.1 mouse_genomes_project 7 78133877 78504562 + MGP_129S1SvImJ_P0084443 Agbl1 protein_coding protein_coding MGP_129S1SvImJ_T0083704.1 MGP_129S1SvImJ_G0032192.1 mouse_genomes_project 7 45222097 45228669 + MGP_129S1SvImJ_P0083704 Irf3 protein_coding protein_coding MGP_129S1SvImJ_T0083705.1 MGP_129S1SvImJ_G0032192.1 mouse_genomes_project 7 45222397 45228213 + MGP_129S1SvImJ_P0083705 Irf3 protein_coding protein_coding MGP_129S1SvImJ_T0015748.1 MGP_129S1SvImJ_G0013837.1 mouse_genomes_project 7 22633865 22636625 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0083516.1 MGP_129S1SvImJ_G0032151.1 mouse_genomes_project 7 44036548 44373083 + MGP_129S1SvImJ_P0083516 Klk1 protein_coding protein_coding MGP_129S1SvImJ_T0083517.1 MGP_129S1SvImJ_G0032151.1 mouse_genomes_project 7 44036626 44372633 + Klk1 protein_coding retained_intron MGP_129S1SvImJ_T0083520.1 MGP_129S1SvImJ_G0032151.1 mouse_genomes_project 7 44168247 44363048 + MGP_129S1SvImJ_P0083520 Klk1 protein_coding protein_coding MGP_129S1SvImJ_T0084210.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65277907 65405809 + MGP_129S1SvImJ_P0084210 Trpm1 protein_coding protein_coding MGP_129S1SvImJ_T0084211.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65277917 65405166 + MGP_129S1SvImJ_P0084211 Trpm1 protein_coding protein_coding MGP_129S1SvImJ_T0084212.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65277917 65358419 + MGP_129S1SvImJ_P0084212 Trpm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084213.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65278000 65405166 + MGP_129S1SvImJ_P0084213 Trpm1 protein_coding protein_coding MGP_129S1SvImJ_T0084214.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65313175 65341563 + Trpm1 protein_coding retained_intron MGP_129S1SvImJ_T0084215.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65313253 65328164 + Trpm1 protein_coding processed_transcript MGP_129S1SvImJ_T0084216.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65313253 65356512 + MGP_129S1SvImJ_P0084216 Trpm1 protein_coding protein_coding MGP_129S1SvImJ_T0084217.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65313344 65356440 + Trpm1 protein_coding retained_intron MGP_129S1SvImJ_T0084218.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65313346 65405791 + MGP_129S1SvImJ_P0084218 Trpm1 protein_coding protein_coding MGP_129S1SvImJ_T0084219.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65313347 65330770 + MGP_129S1SvImJ_P0084219 Trpm1 protein_coding protein_coding MGP_129S1SvImJ_T0084220.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65313349 65350411 + MGP_129S1SvImJ_P0084220 Trpm1 protein_coding protein_coding MGP_129S1SvImJ_T0084221.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65313378 65350411 + MGP_129S1SvImJ_P0084221 Trpm1 protein_coding protein_coding MGP_129S1SvImJ_T0084222.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65313395 65330743 + MGP_129S1SvImJ_P0084222 Trpm1 protein_coding protein_coding MGP_129S1SvImJ_T0084223.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65328142 65330886 + MGP_129S1SvImJ_P0084223 Trpm1 protein_coding protein_coding MGP_129S1SvImJ_T0084224.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65331862 65341032 + Trpm1 protein_coding processed_transcript MGP_129S1SvImJ_T0084225.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65331862 65338470 + MGP_129S1SvImJ_P0084225 Trpm1 protein_coding protein_coding MGP_129S1SvImJ_T0084226.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65340166 65352032 + Trpm1 protein_coding retained_intron MGP_129S1SvImJ_T0084227.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65341051 65355436 + MGP_129S1SvImJ_P0084227 Trpm1 protein_coding protein_coding MGP_129S1SvImJ_T0084228.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65351550 65354899 + Trpm1 protein_coding retained_intron MGP_129S1SvImJ_T0084229.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65358260 65377331 + Trpm1 protein_coding retained_intron MGP_129S1SvImJ_T0084230.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65358627 65364846 + Trpm1 protein_coding processed_transcript MGP_129S1SvImJ_T0084231.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65379557 65404174 + Trpm1 protein_coding retained_intron MGP_129S1SvImJ_T0084232.1 MGP_129S1SvImJ_G0032334.1 mouse_genomes_project 7 65379770 65404054 + MGP_129S1SvImJ_P0084232 Trpm1 protein_coding protein_coding MGP_129S1SvImJ_T0085322.1 MGP_129S1SvImJ_G0032587.1 mouse_genomes_project 7 104829791 104834205 + MGP_129S1SvImJ_P0085322 Phox2a protein_coding protein_coding MGP_129S1SvImJ_T0087888.1 MGP_129S1SvImJ_G0033287.1 mouse_genomes_project 7 149790687 149831024 - MGP_129S1SvImJ_P0087888 Cttn protein_coding protein_coding MGP_129S1SvImJ_T0087889.1 MGP_129S1SvImJ_G0033287.1 mouse_genomes_project 7 149790687 149830760 - MGP_129S1SvImJ_P0087889 Cttn protein_coding protein_coding MGP_129S1SvImJ_T0087890.1 MGP_129S1SvImJ_G0033287.1 mouse_genomes_project 7 149791740 149795012 - Cttn protein_coding retained_intron MGP_129S1SvImJ_T0087891.1 MGP_129S1SvImJ_G0033287.1 mouse_genomes_project 7 149795469 149806678 - Cttn protein_coding retained_intron MGP_129S1SvImJ_T0087892.1 MGP_129S1SvImJ_G0033287.1 mouse_genomes_project 7 149796702 149802806 - Cttn protein_coding processed_transcript MGP_129S1SvImJ_T0087893.1 MGP_129S1SvImJ_G0033287.1 mouse_genomes_project 7 149802703 149809491 - Cttn protein_coding processed_transcript MGP_129S1SvImJ_T0087894.1 MGP_129S1SvImJ_G0033287.1 mouse_genomes_project 7 149813367 149817677 - Cttn protein_coding processed_transcript MGP_129S1SvImJ_T0083547.1 MGP_129S1SvImJ_G0032160.1 mouse_genomes_project 7 44550889 44566619 + MGP_129S1SvImJ_P0083547 Syt3 protein_coding protein_coding MGP_129S1SvImJ_T0083548.1 MGP_129S1SvImJ_G0032160.1 mouse_genomes_project 7 44550914 44552235 + Syt3 protein_coding processed_transcript MGP_129S1SvImJ_T0083549.1 MGP_129S1SvImJ_G0032160.1 mouse_genomes_project 7 44550941 44566776 + MGP_129S1SvImJ_P0083549 Syt3 protein_coding protein_coding MGP_129S1SvImJ_T0083550.1 MGP_129S1SvImJ_G0032160.1 mouse_genomes_project 7 44551391 44552837 + MGP_129S1SvImJ_P0083550 Syt3 protein_coding protein_coding MGP_129S1SvImJ_T0083551.1 MGP_129S1SvImJ_G0032160.1 mouse_genomes_project 7 44551391 44552907 + MGP_129S1SvImJ_P0083551 Syt3 protein_coding protein_coding MGP_129S1SvImJ_T0083552.1 MGP_129S1SvImJ_G0032160.1 mouse_genomes_project 7 44551655 44566353 + MGP_129S1SvImJ_P0083552 Syt3 protein_coding protein_coding MGP_129S1SvImJ_T0008807.1 MGP_129S1SvImJ_G0007114.1 mouse_genomes_project 7 516944 529622 - Gm44920 lincRNA lincRNA MGP_129S1SvImJ_T0083378.1 MGP_129S1SvImJ_G0032102.1 mouse_genomes_project 7 37777263 37788175 - MGP_129S1SvImJ_P0083378 Plekhf1 protein_coding protein_coding MGP_129S1SvImJ_T0100043.1 MGP_129S1SvImJ_G0038110.1 mouse_genomes_project 7 14346897 14347000 - Gm24708 snRNA snRNA MGP_129S1SvImJ_T0081779.1 MGP_129S1SvImJ_G0031708.1 mouse_genomes_project 7 14020719 14089409 - MGP_129S1SvImJ_P0081779 Sae1 protein_coding protein_coding MGP_129S1SvImJ_T0005211.1 MGP_129S1SvImJ_G0004438.1 mouse_genomes_project 7 30214316 30217494 + G630030J09Rik antisense antisense MGP_129S1SvImJ_T0082426.1 MGP_129S1SvImJ_G0031893.1 mouse_genomes_project 7 25522496 25531294 - MGP_129S1SvImJ_P0082426 protein_coding protein_coding MGP_129S1SvImJ_T0087917.1 MGP_129S1SvImJ_G0033294.1 mouse_genomes_project 7 150291823 150310285 + MGP_129S1SvImJ_P0087917 Oraov1 protein_coding protein_coding MGP_129S1SvImJ_T0087918.1 MGP_129S1SvImJ_G0033294.1 mouse_genomes_project 7 150291860 150298575 + MGP_129S1SvImJ_P0087918 Oraov1 protein_coding protein_coding MGP_129S1SvImJ_T0087919.1 MGP_129S1SvImJ_G0033294.1 mouse_genomes_project 7 150291896 150294427 + Oraov1 protein_coding retained_intron MGP_129S1SvImJ_T0087920.1 MGP_129S1SvImJ_G0033294.1 mouse_genomes_project 7 150291898 150293183 + Oraov1 protein_coding processed_transcript MGP_129S1SvImJ_T0087921.1 MGP_129S1SvImJ_G0033294.1 mouse_genomes_project 7 150291905 150309027 + MGP_129S1SvImJ_P0087921 Oraov1 protein_coding protein_coding MGP_129S1SvImJ_T0087922.1 MGP_129S1SvImJ_G0033294.1 mouse_genomes_project 7 150292861 150297270 + Oraov1 protein_coding retained_intron MGP_129S1SvImJ_T0085592.1 MGP_129S1SvImJ_G0032730.1 mouse_genomes_project 7 108098069 108099050 - MGP_129S1SvImJ_P0085592 Olfr667 protein_coding protein_coding MGP_129S1SvImJ_T0087692.1 MGP_129S1SvImJ_G0033249.1 mouse_genomes_project 7 147470541 147471248 - MGP_129S1SvImJ_P0087692 Gm2431 protein_coding protein_coding MGP_129S1SvImJ_T0005319.1 MGP_129S1SvImJ_G0004513.1 mouse_genomes_project 7 132621623 132626858 - Gm44850 antisense antisense MGP_129S1SvImJ_T0008834.1 MGP_129S1SvImJ_G0007138.1 mouse_genomes_project 7 29916064 29917407 + Gm29440 lincRNA lincRNA MGP_129S1SvImJ_T0101353.1 MGP_129S1SvImJ_G0039420.1 mouse_genomes_project 7 128327777 128327906 + Gm25759 snoRNA snoRNA MGP_129S1SvImJ_T0081654.1 MGP_129S1SvImJ_G0031669.1 mouse_genomes_project 7 10620247 10621198 + MGP_129S1SvImJ_P0081654 Vmn1r89 protein_coding protein_coding MGP_129S1SvImJ_T0005294.1 MGP_129S1SvImJ_G0004495.1 mouse_genomes_project 7 119761856 119762428 + Sox6os antisense antisense MGP_129S1SvImJ_T0085781.1 MGP_129S1SvImJ_G0032824.1 mouse_genomes_project 7 112004703 112005654 + MGP_129S1SvImJ_P0085781 Olfr507 protein_coding protein_coding MGP_129S1SvImJ_T0010962.1 MGP_129S1SvImJ_G0009078.1 mouse_genomes_project 7 149348894 149348979 + Mir3105 miRNA miRNA MGP_129S1SvImJ_T0081505.1 MGP_129S1SvImJ_G0031598.1 mouse_genomes_project 7 3318673 3348191 + MGP_129S1SvImJ_P0081505 Gm6792 protein_coding protein_coding MGP_129S1SvImJ_T0081506.1 MGP_129S1SvImJ_G0031598.1 mouse_genomes_project 7 3324332 3348398 + Gm6792 protein_coding processed_transcript MGP_129S1SvImJ_T0081507.1 MGP_129S1SvImJ_G0031598.1 mouse_genomes_project 7 3326118 3348191 + MGP_129S1SvImJ_P0081507 Gm6792 protein_coding protein_coding MGP_129S1SvImJ_T0083365.1 MGP_129S1SvImJ_G0032100.1 mouse_genomes_project 7 37642474 37654265 - MGP_129S1SvImJ_P0083365 Ccne1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0083366.1 MGP_129S1SvImJ_G0032100.1 mouse_genomes_project 7 37642478 37654388 - MGP_129S1SvImJ_P0083366 Ccne1 protein_coding protein_coding MGP_129S1SvImJ_T0083367.1 MGP_129S1SvImJ_G0032100.1 mouse_genomes_project 7 37643162 37643998 - Ccne1 protein_coding retained_intron MGP_129S1SvImJ_T0083368.1 MGP_129S1SvImJ_G0032100.1 mouse_genomes_project 7 37643308 37643866 - Ccne1 protein_coding processed_transcript MGP_129S1SvImJ_T0083369.1 MGP_129S1SvImJ_G0032100.1 mouse_genomes_project 7 37645147 37653753 - MGP_129S1SvImJ_P0083369 Ccne1 protein_coding protein_coding MGP_129S1SvImJ_T0083370.1 MGP_129S1SvImJ_G0032100.1 mouse_genomes_project 7 37647660 37654356 - MGP_129S1SvImJ_P0083370 Ccne1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083109.1 MGP_129S1SvImJ_G0032056.1 mouse_genomes_project 7 30091139 30100766 - MGP_129S1SvImJ_P0083109 Fxyd5 protein_coding protein_coding MGP_129S1SvImJ_T0083110.1 MGP_129S1SvImJ_G0032056.1 mouse_genomes_project 7 30091143 30101401 - MGP_129S1SvImJ_P0083110 Fxyd5 protein_coding protein_coding MGP_129S1SvImJ_T0083111.1 MGP_129S1SvImJ_G0032056.1 mouse_genomes_project 7 30091147 30099351 - Fxyd5 protein_coding retained_intron MGP_129S1SvImJ_T0083112.1 MGP_129S1SvImJ_G0032056.1 mouse_genomes_project 7 30091147 30096360 - Fxyd5 protein_coding retained_intron MGP_129S1SvImJ_T0083113.1 MGP_129S1SvImJ_G0032056.1 mouse_genomes_project 7 30091147 30101045 - MGP_129S1SvImJ_P0083113 Fxyd5 protein_coding protein_coding MGP_129S1SvImJ_T0083114.1 MGP_129S1SvImJ_G0032056.1 mouse_genomes_project 7 30091147 30097975 - MGP_129S1SvImJ_P0083114 Fxyd5 protein_coding protein_coding MGP_129S1SvImJ_T0083115.1 MGP_129S1SvImJ_G0032056.1 mouse_genomes_project 7 30091150 30101005 - MGP_129S1SvImJ_P0083115 Fxyd5 protein_coding protein_coding MGP_129S1SvImJ_T0083116.1 MGP_129S1SvImJ_G0032056.1 mouse_genomes_project 7 30091150 30101005 - MGP_129S1SvImJ_P0083116 Fxyd5 protein_coding protein_coding MGP_129S1SvImJ_T0083117.1 MGP_129S1SvImJ_G0032056.1 mouse_genomes_project 7 30091180 30101073 - MGP_129S1SvImJ_P0083117 Fxyd5 protein_coding protein_coding MGP_129S1SvImJ_T0083118.1 MGP_129S1SvImJ_G0032056.1 mouse_genomes_project 7 30091224 30101067 - MGP_129S1SvImJ_P0083118 Fxyd5 protein_coding protein_coding MGP_129S1SvImJ_T0083119.1 MGP_129S1SvImJ_G0032056.1 mouse_genomes_project 7 30094887 30101043 - MGP_129S1SvImJ_P0083119 Fxyd5 protein_coding protein_coding MGP_129S1SvImJ_T0083120.1 MGP_129S1SvImJ_G0032056.1 mouse_genomes_project 7 30094916 30101040 - MGP_129S1SvImJ_P0083120 Fxyd5 protein_coding protein_coding MGP_129S1SvImJ_T0083121.1 MGP_129S1SvImJ_G0032056.1 mouse_genomes_project 7 30094918 30101014 - MGP_129S1SvImJ_P0083121 Fxyd5 protein_coding protein_coding MGP_129S1SvImJ_T0083122.1 MGP_129S1SvImJ_G0032056.1 mouse_genomes_project 7 30100097 30101067 - Fxyd5 protein_coding retained_intron MGP_129S1SvImJ_T0101977.1 MGP_129S1SvImJ_G0039852.1 mouse_genomes_project 7 41450870 41473350 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101978.1 MGP_129S1SvImJ_G0039852.1 mouse_genomes_project 7 41450883 41481500 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101979.1 MGP_129S1SvImJ_G0039852.1 mouse_genomes_project 7 41450905 41518927 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101980.1 MGP_129S1SvImJ_G0039852.1 mouse_genomes_project 7 41471807 41514261 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101341.1 MGP_129S1SvImJ_G0039408.1 mouse_genomes_project 7 112948511 112948643 + Snora3 snoRNA snoRNA MGP_129S1SvImJ_T0083694.1 MGP_129S1SvImJ_G0032186.1 mouse_genomes_project 7 45109631 45140486 - MGP_129S1SvImJ_P0083694 Ap2a1 protein_coding protein_coding MGP_129S1SvImJ_T0083695.1 MGP_129S1SvImJ_G0032186.1 mouse_genomes_project 7 45109631 45144602 - MGP_129S1SvImJ_P0083695 Ap2a1 protein_coding protein_coding MGP_129S1SvImJ_T0083696.1 MGP_129S1SvImJ_G0032186.1 mouse_genomes_project 7 45109631 45140486 - MGP_129S1SvImJ_P0083696 Ap2a1 protein_coding protein_coding MGP_129S1SvImJ_T0083697.1 MGP_129S1SvImJ_G0032186.1 mouse_genomes_project 7 45109631 45144602 - MGP_129S1SvImJ_P0083697 Ap2a1 protein_coding protein_coding MGP_129S1SvImJ_T0087102.1 MGP_129S1SvImJ_G0033095.1 mouse_genomes_project 7 135418102 135474628 + MGP_129S1SvImJ_P0087102 Plekha1 protein_coding protein_coding MGP_129S1SvImJ_T0087103.1 MGP_129S1SvImJ_G0033095.1 mouse_genomes_project 7 135418231 135450297 + Plekha1 protein_coding retained_intron MGP_129S1SvImJ_T0087104.1 MGP_129S1SvImJ_G0033095.1 mouse_genomes_project 7 135418233 135432495 + Plekha1 protein_coding retained_intron MGP_129S1SvImJ_T0087105.1 MGP_129S1SvImJ_G0033095.1 mouse_genomes_project 7 135418244 135473384 + MGP_129S1SvImJ_P0087105 Plekha1 protein_coding protein_coding MGP_129S1SvImJ_T0087106.1 MGP_129S1SvImJ_G0033095.1 mouse_genomes_project 7 135418249 135470243 + MGP_129S1SvImJ_P0087106 Plekha1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087107.1 MGP_129S1SvImJ_G0033095.1 mouse_genomes_project 7 135418256 135474618 + MGP_129S1SvImJ_P0087107 Plekha1 protein_coding protein_coding MGP_129S1SvImJ_T0087108.1 MGP_129S1SvImJ_G0033095.1 mouse_genomes_project 7 135437900 135441069 + Plekha1 protein_coding retained_intron MGP_129S1SvImJ_T0087109.1 MGP_129S1SvImJ_G0033095.1 mouse_genomes_project 7 135454048 135464373 + Plekha1 protein_coding retained_intron MGP_129S1SvImJ_T0087110.1 MGP_129S1SvImJ_G0033095.1 mouse_genomes_project 7 135459480 135470098 + Plekha1 protein_coding processed_transcript MGP_129S1SvImJ_T0087111.1 MGP_129S1SvImJ_G0033095.1 mouse_genomes_project 7 135461191 135469322 + Plekha1 protein_coding retained_intron MGP_129S1SvImJ_T0087112.1 MGP_129S1SvImJ_G0033095.1 mouse_genomes_project 7 135463850 135472479 + MGP_129S1SvImJ_P0087112 Plekha1 protein_coding protein_coding MGP_129S1SvImJ_T0087113.1 MGP_129S1SvImJ_G0033095.1 mouse_genomes_project 7 135464250 135472217 + Plekha1 protein_coding retained_intron MGP_129S1SvImJ_T0085455.1 MGP_129S1SvImJ_G0032627.1 mouse_genomes_project 7 105919640 105923527 - MGP_129S1SvImJ_P0085455 Olfr566 protein_coding protein_coding MGP_129S1SvImJ_T0102768.1 MGP_129S1SvImJ_G0040600.1 mouse_genomes_project 7 49295985 49296979 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015737.1 MGP_129S1SvImJ_G0013826.1 mouse_genomes_project 7 14915883 14918174 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015742.1 MGP_129S1SvImJ_G0013831.1 mouse_genomes_project 7 16749893 16750463 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085396.1 MGP_129S1SvImJ_G0032600.1 mouse_genomes_project 7 105112277 105127250 + MGP_129S1SvImJ_P0085396 Trpc2 protein_coding protein_coding MGP_129S1SvImJ_T0087015.1 MGP_129S1SvImJ_G0033083.1 mouse_genomes_project 7 132868419 132891644 - MGP_129S1SvImJ_P0087015 Tial1 protein_coding protein_coding MGP_129S1SvImJ_T0087016.1 MGP_129S1SvImJ_G0033083.1 mouse_genomes_project 7 132868867 132891624 - Tial1 protein_coding retained_intron MGP_129S1SvImJ_T0087017.1 MGP_129S1SvImJ_G0033083.1 mouse_genomes_project 7 132870062 132891645 - MGP_129S1SvImJ_P0087017 Tial1 protein_coding protein_coding MGP_129S1SvImJ_T0087018.1 MGP_129S1SvImJ_G0033083.1 mouse_genomes_project 7 132870449 132891295 - MGP_129S1SvImJ_P0087018 Tial1 protein_coding protein_coding MGP_129S1SvImJ_T0087019.1 MGP_129S1SvImJ_G0033083.1 mouse_genomes_project 7 132870863 132873557 - MGP_129S1SvImJ_P0087019 Tial1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087020.1 MGP_129S1SvImJ_G0033083.1 mouse_genomes_project 7 132870934 132891689 - MGP_129S1SvImJ_P0087020 Tial1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087021.1 MGP_129S1SvImJ_G0033083.1 mouse_genomes_project 7 132870934 132891327 - MGP_129S1SvImJ_P0087021 Tial1 protein_coding protein_coding MGP_129S1SvImJ_T0087022.1 MGP_129S1SvImJ_G0033083.1 mouse_genomes_project 7 132870934 132891181 - MGP_129S1SvImJ_P0087022 Tial1 protein_coding protein_coding MGP_129S1SvImJ_T0087023.1 MGP_129S1SvImJ_G0033083.1 mouse_genomes_project 7 132870965 132891318 - MGP_129S1SvImJ_P0087023 Tial1 protein_coding protein_coding MGP_129S1SvImJ_T0087024.1 MGP_129S1SvImJ_G0033083.1 mouse_genomes_project 7 132872465 132876998 - MGP_129S1SvImJ_P0087024 Tial1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087025.1 MGP_129S1SvImJ_G0033083.1 mouse_genomes_project 7 132872940 132874359 - Tial1 protein_coding retained_intron MGP_129S1SvImJ_T0087026.1 MGP_129S1SvImJ_G0033083.1 mouse_genomes_project 7 132873463 132883644 - MGP_129S1SvImJ_P0087026 Tial1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087027.1 MGP_129S1SvImJ_G0033083.1 mouse_genomes_project 7 132875416 132877222 - Tial1 protein_coding retained_intron MGP_129S1SvImJ_T0087028.1 MGP_129S1SvImJ_G0033083.1 mouse_genomes_project 7 132876499 132877530 - Tial1 protein_coding retained_intron MGP_129S1SvImJ_T0015710.1 MGP_129S1SvImJ_G0013799.1 mouse_genomes_project 7 2966937 2967892 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084312.1 MGP_129S1SvImJ_G0032351.1 mouse_genomes_project 7 67592770 67613953 + MGP_129S1SvImJ_P0084312 Gm10974 protein_coding protein_coding MGP_129S1SvImJ_T0083580.1 MGP_129S1SvImJ_G0032164.1 mouse_genomes_project 7 44663514 44670107 - MGP_129S1SvImJ_P0083580 Emc10 protein_coding protein_coding MGP_129S1SvImJ_T0083581.1 MGP_129S1SvImJ_G0032164.1 mouse_genomes_project 7 44663688 44669984 - MGP_129S1SvImJ_P0083581 Emc10 protein_coding protein_coding MGP_129S1SvImJ_T0083582.1 MGP_129S1SvImJ_G0032164.1 mouse_genomes_project 7 44664484 44665594 - Emc10 protein_coding retained_intron MGP_129S1SvImJ_T0083583.1 MGP_129S1SvImJ_G0032164.1 mouse_genomes_project 7 44665310 44670041 - Emc10 protein_coding retained_intron MGP_129S1SvImJ_T0083584.1 MGP_129S1SvImJ_G0032164.1 mouse_genomes_project 7 44665578 44670006 - MGP_129S1SvImJ_P0083584 Emc10 protein_coding protein_coding MGP_129S1SvImJ_T0083585.1 MGP_129S1SvImJ_G0032164.1 mouse_genomes_project 7 44667851 44669975 - Emc10 protein_coding retained_intron MGP_129S1SvImJ_T0083439.1 MGP_129S1SvImJ_G0032120.1 mouse_genomes_project 7 43441562 43442814 + MGP_129S1SvImJ_P0083439 protein_coding protein_coding MGP_129S1SvImJ_T0015732.1 MGP_129S1SvImJ_G0013821.1 mouse_genomes_project 7 14213306 14215923 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008980.1 MGP_129S1SvImJ_G0007241.1 mouse_genomes_project 7 101274479 101298383 - A630091E08Rik lincRNA lincRNA MGP_129S1SvImJ_T0087288.1 MGP_129S1SvImJ_G0033144.1 mouse_genomes_project 7 143889764 143905862 - Bnip3 protein_coding processed_transcript MGP_129S1SvImJ_T0087289.1 MGP_129S1SvImJ_G0033144.1 mouse_genomes_project 7 143889863 143905760 - MGP_129S1SvImJ_P0087289 Bnip3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0087290.1 MGP_129S1SvImJ_G0033144.1 mouse_genomes_project 7 143890093 143894676 - Bnip3 protein_coding processed_transcript MGP_129S1SvImJ_T0087291.1 MGP_129S1SvImJ_G0033144.1 mouse_genomes_project 7 143894939 143905886 - Bnip3 protein_coding processed_transcript MGP_129S1SvImJ_T0087292.1 MGP_129S1SvImJ_G0033144.1 mouse_genomes_project 7 143895109 143905846 - Bnip3 protein_coding processed_transcript MGP_129S1SvImJ_T0087146.1 MGP_129S1SvImJ_G0033106.1 mouse_genomes_project 7 136178921 136180980 + MGP_129S1SvImJ_P0087146 Hmx3 protein_coding protein_coding MGP_129S1SvImJ_T0098380.1 MGP_129S1SvImJ_G0036465.1 mouse_genomes_project 7 84089118 84089732 + pseudogene pseudogene MGP_129S1SvImJ_T0087354.1 MGP_129S1SvImJ_G0033158.1 mouse_genomes_project 7 145074338 145112832 - MGP_129S1SvImJ_P0087354 Tubgcp2 protein_coding protein_coding MGP_129S1SvImJ_T0082254.1 MGP_129S1SvImJ_G0031851.1 mouse_genomes_project 7 23394509 23426833 - MGP_129S1SvImJ_P0082254 Atp1a3 protein_coding protein_coding MGP_129S1SvImJ_T0082255.1 MGP_129S1SvImJ_G0031851.1 mouse_genomes_project 7 23394509 23426896 - MGP_129S1SvImJ_P0082255 Atp1a3 protein_coding protein_coding MGP_129S1SvImJ_T0082256.1 MGP_129S1SvImJ_G0031851.1 mouse_genomes_project 7 23394512 23426881 - MGP_129S1SvImJ_P0082256 Atp1a3 protein_coding protein_coding MGP_129S1SvImJ_T0082257.1 MGP_129S1SvImJ_G0031851.1 mouse_genomes_project 7 23413644 23426845 - Atp1a3 protein_coding retained_intron MGP_129S1SvImJ_T0082258.1 MGP_129S1SvImJ_G0031851.1 mouse_genomes_project 7 23421613 23426895 - Atp1a3 protein_coding retained_intron MGP_129S1SvImJ_T0084021.1 MGP_129S1SvImJ_G0032278.1 mouse_genomes_project 7 47401158 47405374 + protein_coding processed_transcript MGP_129S1SvImJ_T0084022.1 MGP_129S1SvImJ_G0032278.1 mouse_genomes_project 7 47401239 47405382 + protein_coding processed_transcript MGP_129S1SvImJ_T0084023.1 MGP_129S1SvImJ_G0032278.1 mouse_genomes_project 7 47404398 47405375 + MGP_129S1SvImJ_P0084023 protein_coding protein_coding MGP_129S1SvImJ_T0018373.1 MGP_129S1SvImJ_G0015662.1 mouse_genomes_project 7 43728066 43841721 - 2310002F09Rik processed_transcript antisense MGP_129S1SvImJ_T0018374.1 MGP_129S1SvImJ_G0015662.1 mouse_genomes_project 7 43785353 43788681 - 2310002F09Rik processed_transcript antisense MGP_129S1SvImJ_T0018375.1 MGP_129S1SvImJ_G0015662.1 mouse_genomes_project 7 43797597 43798202 - 2310002F09Rik processed_transcript TEC MGP_129S1SvImJ_T0018376.1 MGP_129S1SvImJ_G0015662.1 mouse_genomes_project 7 43840599 43841734 - 2310002F09Rik processed_transcript antisense MGP_129S1SvImJ_T0002312.1 MGP_129S1SvImJ_G0002223.1 mouse_genomes_project 7 120150697 120151650 - TEC TEC MGP_129S1SvImJ_T0102692.1 MGP_129S1SvImJ_G0040525.1 mouse_genomes_project 7 9792113 9792512 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015834.1 MGP_129S1SvImJ_G0013923.1 mouse_genomes_project 7 66577887 66578206 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081965.1 MGP_129S1SvImJ_G0031768.1 mouse_genomes_project 7 17263377 17268831 - MGP_129S1SvImJ_P0081965 Ppm1n protein_coding protein_coding MGP_129S1SvImJ_T0081966.1 MGP_129S1SvImJ_G0031768.1 mouse_genomes_project 7 17263414 17267164 - Ppm1n protein_coding retained_intron MGP_129S1SvImJ_T0081967.1 MGP_129S1SvImJ_G0031768.1 mouse_genomes_project 7 17266583 17266918 - Ppm1n protein_coding retained_intron MGP_129S1SvImJ_T0081968.1 MGP_129S1SvImJ_G0031768.1 mouse_genomes_project 7 17267583 17268368 - Ppm1n protein_coding retained_intron MGP_129S1SvImJ_T0085587.1 MGP_129S1SvImJ_G0032726.1 mouse_genomes_project 7 107805516 107806485 + MGP_129S1SvImJ_P0085587 Olfr659 protein_coding protein_coding MGP_129S1SvImJ_T0102780.1 MGP_129S1SvImJ_G0040612.1 mouse_genomes_project 7 87745930 87746805 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0010957.1 MGP_129S1SvImJ_G0009073.1 mouse_genomes_project 7 147838021 147838105 - Mir675 miRNA miRNA MGP_129S1SvImJ_T0082318.1 MGP_129S1SvImJ_G0031865.1 mouse_genomes_project 7 23846832 23865894 - MGP_129S1SvImJ_P0082318 Lipe protein_coding protein_coding MGP_129S1SvImJ_T0082319.1 MGP_129S1SvImJ_G0031865.1 mouse_genomes_project 7 23847132 23862795 - MGP_129S1SvImJ_P0082319 Lipe protein_coding protein_coding MGP_129S1SvImJ_T0082320.1 MGP_129S1SvImJ_G0031865.1 mouse_genomes_project 7 23850342 23852116 - MGP_129S1SvImJ_P0082320 Lipe protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082321.1 MGP_129S1SvImJ_G0031865.1 mouse_genomes_project 7 23850363 23850998 - Lipe protein_coding retained_intron MGP_129S1SvImJ_T0082322.1 MGP_129S1SvImJ_G0031865.1 mouse_genomes_project 7 23855750 23857667 - MGP_129S1SvImJ_P0082322 Lipe protein_coding protein_coding MGP_129S1SvImJ_T0082323.1 MGP_129S1SvImJ_G0031865.1 mouse_genomes_project 7 23864642 23865893 - MGP_129S1SvImJ_P0082323 Lipe protein_coding protein_coding MGP_129S1SvImJ_T0085560.1 MGP_129S1SvImJ_G0032713.1 mouse_genomes_project 7 107487989 107497552 - MGP_129S1SvImJ_P0085560 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085561.1 MGP_129S1SvImJ_G0032713.1 mouse_genomes_project 7 107487989 107504575 - MGP_129S1SvImJ_P0085561 protein_coding protein_coding MGP_129S1SvImJ_T0085767.1 MGP_129S1SvImJ_G0032810.1 mouse_genomes_project 7 111457790 111458762 - MGP_129S1SvImJ_P0085767 Olfr482 protein_coding protein_coding MGP_129S1SvImJ_T0085518.1 MGP_129S1SvImJ_G0032685.1 mouse_genomes_project 7 107053232 107055278 - MGP_129S1SvImJ_P0085518 Hbb-bh1 protein_coding protein_coding MGP_129S1SvImJ_T0015809.1 MGP_129S1SvImJ_G0013898.1 mouse_genomes_project 7 44456000 44456973 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018440.1 MGP_129S1SvImJ_G0015685.1 mouse_genomes_project 7 116198935 116275227 - 2310014F06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0005216.1 MGP_129S1SvImJ_G0004441.1 mouse_genomes_project 7 33666856 33674404 + Gm12764 antisense antisense MGP_129S1SvImJ_T0081513.1 MGP_129S1SvImJ_G0031600.1 mouse_genomes_project 7 3387726 3403360 - MGP_129S1SvImJ_P0081513 Zfp583 protein_coding protein_coding MGP_129S1SvImJ_T0081514.1 MGP_129S1SvImJ_G0031600.1 mouse_genomes_project 7 3388342 3402509 - MGP_129S1SvImJ_P0081514 Zfp583 protein_coding protein_coding MGP_129S1SvImJ_T0081515.1 MGP_129S1SvImJ_G0031600.1 mouse_genomes_project 7 3388371 3401338 - MGP_129S1SvImJ_P0081515 Zfp583 protein_coding protein_coding MGP_129S1SvImJ_T0081516.1 MGP_129S1SvImJ_G0031600.1 mouse_genomes_project 7 3389695 3403325 - Zfp583 protein_coding processed_transcript MGP_129S1SvImJ_T0081517.1 MGP_129S1SvImJ_G0031600.1 mouse_genomes_project 7 3395268 3403279 - Zfp583 protein_coding processed_transcript MGP_129S1SvImJ_T0081518.1 MGP_129S1SvImJ_G0031600.1 mouse_genomes_project 7 3395722 3403353 - MGP_129S1SvImJ_P0081518 Zfp583 protein_coding protein_coding MGP_129S1SvImJ_T0087394.1 MGP_129S1SvImJ_G0033171.1 mouse_genomes_project 7 145315316 145327999 + MGP_129S1SvImJ_P0087394 Cd163l1 protein_coding protein_coding MGP_129S1SvImJ_T0086382.1 MGP_129S1SvImJ_G0032970.1 mouse_genomes_project 7 129857459 129927055 - MGP_129S1SvImJ_P0086382 Gtf3c1 protein_coding protein_coding MGP_129S1SvImJ_T0086383.1 MGP_129S1SvImJ_G0032970.1 mouse_genomes_project 7 129857459 129927158 - MGP_129S1SvImJ_P0086383 Gtf3c1 protein_coding protein_coding MGP_129S1SvImJ_T0086384.1 MGP_129S1SvImJ_G0032970.1 mouse_genomes_project 7 129860688 129866483 - Gtf3c1 protein_coding retained_intron MGP_129S1SvImJ_T0086385.1 MGP_129S1SvImJ_G0032970.1 mouse_genomes_project 7 129864035 129873848 - MGP_129S1SvImJ_P0086385 Gtf3c1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086386.1 MGP_129S1SvImJ_G0032970.1 mouse_genomes_project 7 129881326 129927138 - Gtf3c1 protein_coding retained_intron MGP_129S1SvImJ_T0086387.1 MGP_129S1SvImJ_G0032970.1 mouse_genomes_project 7 129881638 129927120 - MGP_129S1SvImJ_P0086387 Gtf3c1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086388.1 MGP_129S1SvImJ_G0032970.1 mouse_genomes_project 7 129881758 129888338 - MGP_129S1SvImJ_P0086388 Gtf3c1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086389.1 MGP_129S1SvImJ_G0032970.1 mouse_genomes_project 7 129886988 129889105 - Gtf3c1 protein_coding retained_intron MGP_129S1SvImJ_T0086390.1 MGP_129S1SvImJ_G0032970.1 mouse_genomes_project 7 129910597 129918875 - Gtf3c1 protein_coding retained_intron MGP_129S1SvImJ_T0086391.1 MGP_129S1SvImJ_G0032970.1 mouse_genomes_project 7 129912606 129925914 - MGP_129S1SvImJ_P0086391 Gtf3c1 protein_coding protein_coding MGP_129S1SvImJ_T0081558.1 MGP_129S1SvImJ_G0031627.1 mouse_genomes_project 7 7950748 8000520 + MGP_129S1SvImJ_P0081558 Nlrp4b protein_coding protein_coding MGP_129S1SvImJ_T0081559.1 MGP_129S1SvImJ_G0031627.1 mouse_genomes_project 7 7950776 8000530 + MGP_129S1SvImJ_P0081559 Nlrp4b protein_coding protein_coding MGP_129S1SvImJ_T0081560.1 MGP_129S1SvImJ_G0031627.1 mouse_genomes_project 7 7985257 7997497 + MGP_129S1SvImJ_P0081560 Nlrp4b protein_coding protein_coding MGP_129S1SvImJ_T0018428.1 MGP_129S1SvImJ_G0015678.1 mouse_genomes_project 7 83085248 83092309 + Platr32 processed_transcript processed_transcript MGP_129S1SvImJ_T0086469.1 MGP_129S1SvImJ_G0032983.1 mouse_genomes_project 7 130765764 130769124 + MGP_129S1SvImJ_P0086469 protein_coding protein_coding MGP_129S1SvImJ_T0087358.1 MGP_129S1SvImJ_G0033161.1 mouse_genomes_project 7 145147717 145160386 - MGP_129S1SvImJ_P0087358 Caly protein_coding protein_coding MGP_129S1SvImJ_T0087359.1 MGP_129S1SvImJ_G0033161.1 mouse_genomes_project 7 145147717 145160139 - MGP_129S1SvImJ_P0087359 Caly protein_coding protein_coding MGP_129S1SvImJ_T0084575.1 MGP_129S1SvImJ_G0032400.1 mouse_genomes_project 7 81842614 81852028 - MGP_129S1SvImJ_P0084575 Arpin protein_coding protein_coding MGP_129S1SvImJ_T0015806.1 MGP_129S1SvImJ_G0013895.1 mouse_genomes_project 7 43915978 43916283 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015704.1 MGP_129S1SvImJ_G0013793.1 mouse_genomes_project 7 1326598 1327061 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085601.1 MGP_129S1SvImJ_G0032739.1 mouse_genomes_project 7 108347630 108348582 + MGP_129S1SvImJ_P0085601 protein_coding protein_coding MGP_129S1SvImJ_T0081842.1 MGP_129S1SvImJ_G0031725.1 mouse_genomes_project 7 14734277 14739239 + MGP_129S1SvImJ_P0081842 Pnmal1 protein_coding protein_coding MGP_129S1SvImJ_T0081623.1 MGP_129S1SvImJ_G0031660.1 mouse_genomes_project 7 10386582 10387375 - Slc27a5 protein_coding processed_transcript MGP_129S1SvImJ_T0081624.1 MGP_129S1SvImJ_G0031660.1 mouse_genomes_project 7 10386582 10399547 - MGP_129S1SvImJ_P0081624 Slc27a5 protein_coding protein_coding MGP_129S1SvImJ_T0081625.1 MGP_129S1SvImJ_G0031660.1 mouse_genomes_project 7 10386588 10399589 - MGP_129S1SvImJ_P0081625 Slc27a5 protein_coding protein_coding MGP_129S1SvImJ_T0081626.1 MGP_129S1SvImJ_G0031660.1 mouse_genomes_project 7 10393247 10398201 - Slc27a5 protein_coding retained_intron MGP_129S1SvImJ_T0081627.1 MGP_129S1SvImJ_G0031660.1 mouse_genomes_project 7 10393247 10399074 - MGP_129S1SvImJ_P0081627 Slc27a5 protein_coding protein_coding MGP_129S1SvImJ_T0086538.1 MGP_129S1SvImJ_G0032994.1 mouse_genomes_project 7 130986958 130991405 - MGP_129S1SvImJ_P0086538 Coro1a protein_coding protein_coding MGP_129S1SvImJ_T0086539.1 MGP_129S1SvImJ_G0032994.1 mouse_genomes_project 7 130986958 130992001 - MGP_129S1SvImJ_P0086539 Coro1a protein_coding protein_coding MGP_129S1SvImJ_T0086540.1 MGP_129S1SvImJ_G0032994.1 mouse_genomes_project 7 130987066 130990358 - MGP_129S1SvImJ_P0086540 Coro1a protein_coding protein_coding MGP_129S1SvImJ_T0086541.1 MGP_129S1SvImJ_G0032994.1 mouse_genomes_project 7 130987496 130988413 - Coro1a protein_coding retained_intron MGP_129S1SvImJ_T0086542.1 MGP_129S1SvImJ_G0032994.1 mouse_genomes_project 7 130987540 130988446 - Coro1a protein_coding retained_intron MGP_129S1SvImJ_T0086543.1 MGP_129S1SvImJ_G0032994.1 mouse_genomes_project 7 130988176 130989281 - Coro1a protein_coding retained_intron MGP_129S1SvImJ_T0086544.1 MGP_129S1SvImJ_G0032994.1 mouse_genomes_project 7 130988177 130990359 - MGP_129S1SvImJ_P0086544 Coro1a protein_coding protein_coding MGP_129S1SvImJ_T0086545.1 MGP_129S1SvImJ_G0032994.1 mouse_genomes_project 7 130988515 130989658 - Coro1a protein_coding retained_intron MGP_129S1SvImJ_T0086546.1 MGP_129S1SvImJ_G0032994.1 mouse_genomes_project 7 130988532 130991939 - MGP_129S1SvImJ_P0086546 Coro1a protein_coding protein_coding MGP_129S1SvImJ_T0086547.1 MGP_129S1SvImJ_G0032994.1 mouse_genomes_project 7 130989076 130991732 - MGP_129S1SvImJ_P0086547 Coro1a protein_coding protein_coding MGP_129S1SvImJ_T0086548.1 MGP_129S1SvImJ_G0032994.1 mouse_genomes_project 7 130989087 130994973 - MGP_129S1SvImJ_P0086548 Coro1a protein_coding protein_coding MGP_129S1SvImJ_T0086549.1 MGP_129S1SvImJ_G0032994.1 mouse_genomes_project 7 130990016 130991938 - Coro1a protein_coding retained_intron MGP_129S1SvImJ_T0015881.1 MGP_129S1SvImJ_G0013970.1 mouse_genomes_project 7 101165206 101165520 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010907.1 MGP_129S1SvImJ_G0009023.1 mouse_genomes_project 7 62796863 62796933 - Gm23873 miRNA miRNA MGP_129S1SvImJ_T0081896.1 MGP_129S1SvImJ_G0031749.1 mouse_genomes_project 7 16859444 16897961 + MGP_129S1SvImJ_P0081896 protein_coding protein_coding MGP_129S1SvImJ_T0081269.1 MGP_129S1SvImJ_G0031533.1 mouse_genomes_project 7 695068 698705 - MGP_129S1SvImJ_P0081269 protein_coding protein_coding MGP_129S1SvImJ_T0086873.1 MGP_129S1SvImJ_G0033055.1 mouse_genomes_project 7 132173531 132178345 + Hsd3b7 protein_coding retained_intron MGP_129S1SvImJ_T0086874.1 MGP_129S1SvImJ_G0033055.1 mouse_genomes_project 7 132173531 132178345 + Hsd3b7 protein_coding retained_intron MGP_129S1SvImJ_T0086875.1 MGP_129S1SvImJ_G0033055.1 mouse_genomes_project 7 132173541 132176941 + MGP_129S1SvImJ_P0086875 Hsd3b7 protein_coding protein_coding MGP_129S1SvImJ_T0086876.1 MGP_129S1SvImJ_G0033055.1 mouse_genomes_project 7 132173541 132178345 + MGP_129S1SvImJ_P0086876 Hsd3b7 protein_coding protein_coding MGP_129S1SvImJ_T0086877.1 MGP_129S1SvImJ_G0033055.1 mouse_genomes_project 7 132173563 132176565 + MGP_129S1SvImJ_P0086877 Hsd3b7 protein_coding protein_coding MGP_129S1SvImJ_T0086878.1 MGP_129S1SvImJ_G0033055.1 mouse_genomes_project 7 132173570 132177744 + MGP_129S1SvImJ_P0086878 Hsd3b7 protein_coding protein_coding MGP_129S1SvImJ_T0086879.1 MGP_129S1SvImJ_G0033055.1 mouse_genomes_project 7 132173573 132176813 + MGP_129S1SvImJ_P0086879 Hsd3b7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086880.1 MGP_129S1SvImJ_G0033055.1 mouse_genomes_project 7 132173574 132176766 + Hsd3b7 protein_coding retained_intron MGP_129S1SvImJ_T0086881.1 MGP_129S1SvImJ_G0033055.1 mouse_genomes_project 7 132173585 132176656 + Hsd3b7 protein_coding retained_intron MGP_129S1SvImJ_T0086882.1 MGP_129S1SvImJ_G0033055.1 mouse_genomes_project 7 132173598 132176870 + Hsd3b7 protein_coding retained_intron MGP_129S1SvImJ_T0086883.1 MGP_129S1SvImJ_G0033055.1 mouse_genomes_project 7 132173607 132176581 + MGP_129S1SvImJ_P0086883 Hsd3b7 protein_coding protein_coding MGP_129S1SvImJ_T0086884.1 MGP_129S1SvImJ_G0033055.1 mouse_genomes_project 7 132175471 132176049 + MGP_129S1SvImJ_P0086884 Hsd3b7 protein_coding protein_coding MGP_129S1SvImJ_T0015906.1 MGP_129S1SvImJ_G0013995.1 mouse_genomes_project 7 120554776 120555651 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098634.1 MGP_129S1SvImJ_G0036719.1 mouse_genomes_project 7 34454903 34455022 + Gm22535 rRNA rRNA MGP_129S1SvImJ_T0081566.1 MGP_129S1SvImJ_G0031633.1 mouse_genomes_project 7 9027660 9028581 - MGP_129S1SvImJ_P0081566 Vmn1r72 protein_coding protein_coding MGP_129S1SvImJ_T0087406.1 MGP_129S1SvImJ_G0033181.1 mouse_genomes_project 7 145590595 145596047 - MGP_129S1SvImJ_P0087406 Olfr536 protein_coding protein_coding MGP_129S1SvImJ_T0082815.1 MGP_129S1SvImJ_G0031991.1 mouse_genomes_project 7 28830949 28844230 - MGP_129S1SvImJ_P0082815 Zfp27 protein_coding protein_coding MGP_129S1SvImJ_T0082816.1 MGP_129S1SvImJ_G0031991.1 mouse_genomes_project 7 28831331 28838224 - MGP_129S1SvImJ_P0082816 Zfp27 protein_coding protein_coding MGP_129S1SvImJ_T0082817.1 MGP_129S1SvImJ_G0031991.1 mouse_genomes_project 7 28831332 28843758 - MGP_129S1SvImJ_P0082817 Zfp27 protein_coding protein_coding MGP_129S1SvImJ_T0082818.1 MGP_129S1SvImJ_G0031991.1 mouse_genomes_project 7 28831332 28844187 - MGP_129S1SvImJ_P0082818 Zfp27 protein_coding protein_coding MGP_129S1SvImJ_T0082819.1 MGP_129S1SvImJ_G0031991.1 mouse_genomes_project 7 28831695 28836583 - MGP_129S1SvImJ_P0082819 Zfp27 protein_coding protein_coding MGP_129S1SvImJ_T0082820.1 MGP_129S1SvImJ_G0031991.1 mouse_genomes_project 7 28837972 28843714 - Zfp27 protein_coding processed_transcript MGP_129S1SvImJ_T0010911.1 MGP_129S1SvImJ_G0009027.1 mouse_genomes_project 7 63004871 63004951 - Mir344-2 miRNA miRNA MGP_129S1SvImJ_T0081557.1 MGP_129S1SvImJ_G0031626.1 mouse_genomes_project 7 7897852 7898749 + MGP_129S1SvImJ_P0081557 Vmn1r70 protein_coding protein_coding MGP_129S1SvImJ_T0082776.1 MGP_129S1SvImJ_G0031983.1 mouse_genomes_project 7 28244996 28448766 - MGP_129S1SvImJ_P0082776 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0082777.1 MGP_129S1SvImJ_G0031983.1 mouse_genomes_project 7 28245002 28306476 - MGP_129S1SvImJ_P0082777 protein_coding protein_coding MGP_129S1SvImJ_T0082778.1 MGP_129S1SvImJ_G0031983.1 mouse_genomes_project 7 28245008 28281966 - protein_coding retained_intron MGP_129S1SvImJ_T0082779.1 MGP_129S1SvImJ_G0031983.1 mouse_genomes_project 7 28245962 28281888 - protein_coding retained_intron MGP_129S1SvImJ_T0082780.1 MGP_129S1SvImJ_G0031983.1 mouse_genomes_project 7 28246455 28253173 - MGP_129S1SvImJ_P0082780 protein_coding protein_coding MGP_129S1SvImJ_T0082781.1 MGP_129S1SvImJ_G0031983.1 mouse_genomes_project 7 28246750 28296688 - MGP_129S1SvImJ_P0082781 protein_coding protein_coding MGP_129S1SvImJ_T0082782.1 MGP_129S1SvImJ_G0031983.1 mouse_genomes_project 7 28248029 28266179 - protein_coding retained_intron MGP_129S1SvImJ_T0082783.1 MGP_129S1SvImJ_G0031983.1 mouse_genomes_project 7 28255271 28263373 - protein_coding retained_intron MGP_129S1SvImJ_T0082784.1 MGP_129S1SvImJ_G0031983.1 mouse_genomes_project 7 28294453 28296161 - protein_coding retained_intron MGP_129S1SvImJ_T0082785.1 MGP_129S1SvImJ_G0031983.1 mouse_genomes_project 7 28295573 28296696 - MGP_129S1SvImJ_P0082785 protein_coding protein_coding MGP_129S1SvImJ_T0082786.1 MGP_129S1SvImJ_G0031983.1 mouse_genomes_project 7 28299657 28306616 - protein_coding retained_intron MGP_129S1SvImJ_T0082787.1 MGP_129S1SvImJ_G0031983.1 mouse_genomes_project 7 28314483 28435656 - protein_coding processed_transcript MGP_129S1SvImJ_T0082788.1 MGP_129S1SvImJ_G0031983.1 mouse_genomes_project 7 28330580 28448727 - MGP_129S1SvImJ_P0082788 protein_coding protein_coding MGP_129S1SvImJ_T0082789.1 MGP_129S1SvImJ_G0031983.1 mouse_genomes_project 7 28330685 28448756 - protein_coding processed_transcript MGP_129S1SvImJ_T0082790.1 MGP_129S1SvImJ_G0031983.1 mouse_genomes_project 7 28330758 28448730 - protein_coding processed_transcript MGP_129S1SvImJ_T0082791.1 MGP_129S1SvImJ_G0031983.1 mouse_genomes_project 7 28423923 28448675 - protein_coding processed_transcript MGP_129S1SvImJ_T0082792.1 MGP_129S1SvImJ_G0031983.1 mouse_genomes_project 7 28446885 28448670 - protein_coding processed_transcript MGP_129S1SvImJ_T0100064.1 MGP_129S1SvImJ_G0038131.1 mouse_genomes_project 7 75219288 75219393 - Gm26176 snRNA snRNA MGP_129S1SvImJ_T0102757.1 MGP_129S1SvImJ_G0040589.1 mouse_genomes_project 7 48433222 48434049 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102785.1 MGP_129S1SvImJ_G0040617.1 mouse_genomes_project 7 88000452 88000772 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0081190.1 MGP_129S1SvImJ_G0031521.1 mouse_genomes_project 7 535277 541611 - MGP_129S1SvImJ_P0081190 Oscar protein_coding protein_coding MGP_129S1SvImJ_T0081191.1 MGP_129S1SvImJ_G0031521.1 mouse_genomes_project 7 535277 541635 - MGP_129S1SvImJ_P0081191 Oscar protein_coding protein_coding MGP_129S1SvImJ_T0081192.1 MGP_129S1SvImJ_G0031521.1 mouse_genomes_project 7 535277 541635 - MGP_129S1SvImJ_P0081192 Oscar protein_coding protein_coding MGP_129S1SvImJ_T0081193.1 MGP_129S1SvImJ_G0031521.1 mouse_genomes_project 7 536635 541563 - Oscar protein_coding processed_transcript MGP_129S1SvImJ_T0015784.1 MGP_129S1SvImJ_G0013873.1 mouse_genomes_project 7 39213862 39214645 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100085.1 MGP_129S1SvImJ_G0038152.1 mouse_genomes_project 7 123915792 123915893 + Gm25217 snRNA snRNA MGP_129S1SvImJ_T0085046.1 MGP_129S1SvImJ_G0032528.1 mouse_genomes_project 7 100286105 100289197 + Rsf1 protein_coding retained_intron MGP_129S1SvImJ_T0085047.1 MGP_129S1SvImJ_G0032528.1 mouse_genomes_project 7 100286113 100394234 + Rsf1 protein_coding retained_intron MGP_129S1SvImJ_T0085048.1 MGP_129S1SvImJ_G0032528.1 mouse_genomes_project 7 100286113 100400596 + MGP_129S1SvImJ_P0085048 Rsf1 protein_coding protein_coding MGP_129S1SvImJ_T0085049.1 MGP_129S1SvImJ_G0032528.1 mouse_genomes_project 7 100286123 100347704 + MGP_129S1SvImJ_P0085049 Rsf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085050.1 MGP_129S1SvImJ_G0032528.1 mouse_genomes_project 7 100365420 100369106 + Rsf1 protein_coding retained_intron MGP_129S1SvImJ_T0085051.1 MGP_129S1SvImJ_G0032528.1 mouse_genomes_project 7 100370743 100394422 + MGP_129S1SvImJ_P0085051 Rsf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085052.1 MGP_129S1SvImJ_G0032528.1 mouse_genomes_project 7 100377685 100383994 + Rsf1 protein_coding retained_intron MGP_129S1SvImJ_T0085053.1 MGP_129S1SvImJ_G0032528.1 mouse_genomes_project 7 100378040 100388609 + MGP_129S1SvImJ_P0085053 Rsf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0015808.1 MGP_129S1SvImJ_G0013897.1 mouse_genomes_project 7 44437681 44438630 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084877.1 MGP_129S1SvImJ_G0032480.1 mouse_genomes_project 7 88795345 88796278 + MGP_129S1SvImJ_P0084877 Olfr297 protein_coding protein_coding MGP_129S1SvImJ_T0082701.1 MGP_129S1SvImJ_G0031964.1 mouse_genomes_project 7 27690120 27691827 + protein_coding retained_intron MGP_129S1SvImJ_T0082702.1 MGP_129S1SvImJ_G0031964.1 mouse_genomes_project 7 27690151 27694577 + protein_coding retained_intron MGP_129S1SvImJ_T0082703.1 MGP_129S1SvImJ_G0031964.1 mouse_genomes_project 7 27690486 27698882 + MGP_129S1SvImJ_P0082703 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081541.1 MGP_129S1SvImJ_G0031615.1 mouse_genomes_project 7 3828140 4076264 + MGP_129S1SvImJ_P0081541 Usp29 protein_coding protein_coding MGP_129S1SvImJ_T0081542.1 MGP_129S1SvImJ_G0031615.1 mouse_genomes_project 7 3828298 4070807 + MGP_129S1SvImJ_P0081542 Usp29 protein_coding protein_coding MGP_129S1SvImJ_T0081543.1 MGP_129S1SvImJ_G0031615.1 mouse_genomes_project 7 4056349 4073860 + MGP_129S1SvImJ_P0081543 Usp29 protein_coding protein_coding MGP_129S1SvImJ_T0081544.1 MGP_129S1SvImJ_G0031615.1 mouse_genomes_project 7 4070212 4072822 + MGP_129S1SvImJ_P0081544 Usp29 protein_coding protein_coding MGP_129S1SvImJ_T0084506.1 MGP_129S1SvImJ_G0032387.1 mouse_genomes_project 7 81248753 81267687 - MGP_129S1SvImJ_P0084506 Rlbp1 protein_coding protein_coding MGP_129S1SvImJ_T0084507.1 MGP_129S1SvImJ_G0032387.1 mouse_genomes_project 7 81248754 81267598 - MGP_129S1SvImJ_P0084507 Rlbp1 protein_coding protein_coding MGP_129S1SvImJ_T0084508.1 MGP_129S1SvImJ_G0032387.1 mouse_genomes_project 7 81249428 81251598 - Rlbp1 protein_coding retained_intron MGP_129S1SvImJ_T0084509.1 MGP_129S1SvImJ_G0032387.1 mouse_genomes_project 7 81249804 81264743 - MGP_129S1SvImJ_P0084509 Rlbp1 protein_coding protein_coding MGP_129S1SvImJ_T0084510.1 MGP_129S1SvImJ_G0032387.1 mouse_genomes_project 7 81251278 81267180 - MGP_129S1SvImJ_P0084510 Rlbp1 protein_coding protein_coding MGP_129S1SvImJ_T0084511.1 MGP_129S1SvImJ_G0032387.1 mouse_genomes_project 7 81259163 81267244 - MGP_129S1SvImJ_P0084511 Rlbp1 protein_coding protein_coding MGP_129S1SvImJ_T0084512.1 MGP_129S1SvImJ_G0032387.1 mouse_genomes_project 7 81262263 81267113 - MGP_129S1SvImJ_P0084512 Rlbp1 protein_coding protein_coding MGP_129S1SvImJ_T0084513.1 MGP_129S1SvImJ_G0032387.1 mouse_genomes_project 7 81264493 81267551 - MGP_129S1SvImJ_P0084513 Rlbp1 protein_coding protein_coding MGP_129S1SvImJ_T0008856.1 MGP_129S1SvImJ_G0007159.1 mouse_genomes_project 7 39168615 39177493 + Gm37494 lincRNA lincRNA MGP_129S1SvImJ_T0008857.1 MGP_129S1SvImJ_G0007159.1 mouse_genomes_project 7 39176660 39177891 + Gm37494 lincRNA lincRNA MGP_129S1SvImJ_T0008858.1 MGP_129S1SvImJ_G0007159.1 mouse_genomes_project 7 39176661 39205542 + Gm37494 lincRNA lincRNA MGP_129S1SvImJ_T0008859.1 MGP_129S1SvImJ_G0007159.1 mouse_genomes_project 7 39176685 39189224 + Gm37494 lincRNA lincRNA MGP_129S1SvImJ_T0102798.1 MGP_129S1SvImJ_G0040630.1 mouse_genomes_project 7 92151540 92151753 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002276.1 MGP_129S1SvImJ_G0002188.1 mouse_genomes_project 7 75057445 75058692 - TEC TEC MGP_129S1SvImJ_T0008824.1 MGP_129S1SvImJ_G0007129.1 mouse_genomes_project 7 23591191 23595370 + D930028M14Rik lincRNA lincRNA MGP_129S1SvImJ_T0008825.1 MGP_129S1SvImJ_G0007129.1 mouse_genomes_project 7 23593809 23594961 + D930028M14Rik lincRNA lincRNA MGP_129S1SvImJ_T0082093.1 MGP_129S1SvImJ_G0031805.1 mouse_genomes_project 7 18081014 18130132 + MGP_129S1SvImJ_P0082093 Nlrp9b protein_coding protein_coding MGP_129S1SvImJ_T0082094.1 MGP_129S1SvImJ_G0031805.1 mouse_genomes_project 7 18088702 18130074 + MGP_129S1SvImJ_P0082094 Nlrp9b protein_coding protein_coding MGP_129S1SvImJ_T0015932.1 MGP_129S1SvImJ_G0014021.1 mouse_genomes_project 7 133129863 133130313 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0087391.1 MGP_129S1SvImJ_G0033168.1 mouse_genomes_project 7 145258182 145259258 - MGP_129S1SvImJ_P0087391 Olfr522 protein_coding protein_coding MGP_129S1SvImJ_T0082514.1 MGP_129S1SvImJ_G0031914.1 mouse_genomes_project 7 26159406 26181744 + MGP_129S1SvImJ_P0082514 Prx protein_coding protein_coding MGP_129S1SvImJ_T0082515.1 MGP_129S1SvImJ_G0031914.1 mouse_genomes_project 7 26159406 26181744 + MGP_129S1SvImJ_P0082515 Prx protein_coding protein_coding MGP_129S1SvImJ_T0082516.1 MGP_129S1SvImJ_G0031914.1 mouse_genomes_project 7 26167609 26181564 + MGP_129S1SvImJ_P0082516 Prx protein_coding protein_coding MGP_129S1SvImJ_T0082517.1 MGP_129S1SvImJ_G0031914.1 mouse_genomes_project 7 26167614 26181571 + MGP_129S1SvImJ_P0082517 Prx protein_coding protein_coding MGP_129S1SvImJ_T0082756.1 MGP_129S1SvImJ_G0031978.1 mouse_genomes_project 7 28148845 28158042 + MGP_129S1SvImJ_P0082756 Yif1b protein_coding protein_coding MGP_129S1SvImJ_T0082757.1 MGP_129S1SvImJ_G0031978.1 mouse_genomes_project 7 28148869 28158042 + MGP_129S1SvImJ_P0082757 Yif1b protein_coding protein_coding MGP_129S1SvImJ_T0082758.1 MGP_129S1SvImJ_G0031978.1 mouse_genomes_project 7 28148885 28155354 + MGP_129S1SvImJ_P0082758 Yif1b protein_coding protein_coding MGP_129S1SvImJ_T0082759.1 MGP_129S1SvImJ_G0031978.1 mouse_genomes_project 7 28148968 28158106 + MGP_129S1SvImJ_P0082759 Yif1b protein_coding protein_coding MGP_129S1SvImJ_T0082760.1 MGP_129S1SvImJ_G0031978.1 mouse_genomes_project 7 28148989 28156507 + Yif1b protein_coding processed_transcript MGP_129S1SvImJ_T0081207.1 MGP_129S1SvImJ_G0031524.1 mouse_genomes_project 7 555436 567935 + MGP_129S1SvImJ_P0081207 Prpf31 protein_coding protein_coding MGP_129S1SvImJ_T0081208.1 MGP_129S1SvImJ_G0031524.1 mouse_genomes_project 7 555436 567936 + MGP_129S1SvImJ_P0081208 Prpf31 protein_coding protein_coding MGP_129S1SvImJ_T0081209.1 MGP_129S1SvImJ_G0031524.1 mouse_genomes_project 7 555443 556873 + Prpf31 protein_coding retained_intron MGP_129S1SvImJ_T0081210.1 MGP_129S1SvImJ_G0031524.1 mouse_genomes_project 7 555510 562508 + MGP_129S1SvImJ_P0081210 Prpf31 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081211.1 MGP_129S1SvImJ_G0031524.1 mouse_genomes_project 7 556008 566679 + MGP_129S1SvImJ_P0081211 Prpf31 protein_coding protein_coding MGP_129S1SvImJ_T0081212.1 MGP_129S1SvImJ_G0031524.1 mouse_genomes_project 7 561546 562508 + Prpf31 protein_coding retained_intron MGP_129S1SvImJ_T0087305.1 MGP_129S1SvImJ_G0033148.1 mouse_genomes_project 7 144216276 144223345 + MGP_129S1SvImJ_P0087305 Lrrc27 protein_coding protein_coding MGP_129S1SvImJ_T0087306.1 MGP_129S1SvImJ_G0033148.1 mouse_genomes_project 7 144216537 144237172 + MGP_129S1SvImJ_P0087306 Lrrc27 protein_coding protein_coding MGP_129S1SvImJ_T0087307.1 MGP_129S1SvImJ_G0033148.1 mouse_genomes_project 7 144216545 144253980 + MGP_129S1SvImJ_P0087307 Lrrc27 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0087308.1 MGP_129S1SvImJ_G0033148.1 mouse_genomes_project 7 144219760 144228119 + MGP_129S1SvImJ_P0087308 Lrrc27 protein_coding protein_coding MGP_129S1SvImJ_T0087309.1 MGP_129S1SvImJ_G0033148.1 mouse_genomes_project 7 144225653 144234313 + Lrrc27 protein_coding processed_transcript MGP_129S1SvImJ_T0087310.1 MGP_129S1SvImJ_G0033148.1 mouse_genomes_project 7 144227634 144234406 + Lrrc27 protein_coding retained_intron MGP_129S1SvImJ_T0087311.1 MGP_129S1SvImJ_G0033148.1 mouse_genomes_project 7 144242072 144254174 + Lrrc27 protein_coding processed_transcript MGP_129S1SvImJ_T0087312.1 MGP_129S1SvImJ_G0033148.1 mouse_genomes_project 7 144245775 144254175 + Lrrc27 protein_coding processed_transcript MGP_129S1SvImJ_T0087313.1 MGP_129S1SvImJ_G0033148.1 mouse_genomes_project 7 144248330 144254179 + Lrrc27 protein_coding processed_transcript MGP_129S1SvImJ_T0087539.1 MGP_129S1SvImJ_G0033220.1 mouse_genomes_project 7 146451416 146459118 - MGP_129S1SvImJ_P0087539 Cdhr5 protein_coding protein_coding MGP_129S1SvImJ_T0087540.1 MGP_129S1SvImJ_G0033220.1 mouse_genomes_project 7 146451416 146459118 - MGP_129S1SvImJ_P0087540 Cdhr5 protein_coding protein_coding MGP_129S1SvImJ_T0083966.1 MGP_129S1SvImJ_G0032265.1 mouse_genomes_project 7 46815375 47023876 - MGP_129S1SvImJ_P0083966 Sergef protein_coding protein_coding MGP_129S1SvImJ_T0083967.1 MGP_129S1SvImJ_G0032265.1 mouse_genomes_project 7 46815428 46984708 - Sergef protein_coding processed_transcript MGP_129S1SvImJ_T0083968.1 MGP_129S1SvImJ_G0032265.1 mouse_genomes_project 7 46815681 46996254 - Sergef protein_coding processed_transcript MGP_129S1SvImJ_T0083969.1 MGP_129S1SvImJ_G0032265.1 mouse_genomes_project 7 47015080 47018368 - Sergef protein_coding retained_intron MGP_129S1SvImJ_T0083970.1 MGP_129S1SvImJ_G0032265.1 mouse_genomes_project 7 47015102 47023700 - MGP_129S1SvImJ_P0083970 Sergef protein_coding protein_coding MGP_129S1SvImJ_T0083971.1 MGP_129S1SvImJ_G0032265.1 mouse_genomes_project 7 47015116 47023649 - Sergef protein_coding processed_transcript MGP_129S1SvImJ_T0102789.1 MGP_129S1SvImJ_G0040621.1 mouse_genomes_project 7 88312853 88323497 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0086091.1 MGP_129S1SvImJ_G0032898.1 mouse_genomes_project 7 122319487 122326327 - MGP_129S1SvImJ_P0086091 Itpripl2 protein_coding protein_coding MGP_129S1SvImJ_T0085763.1 MGP_129S1SvImJ_G0032806.1 mouse_genomes_project 7 111392942 111393887 - MGP_129S1SvImJ_P0085763 Olfr478 protein_coding protein_coding MGP_129S1SvImJ_T0010917.1 MGP_129S1SvImJ_G0009033.1 mouse_genomes_project 7 65384659 65384776 - Mir6416 miRNA miRNA MGP_129S1SvImJ_T0084299.1 MGP_129S1SvImJ_G0032348.1 mouse_genomes_project 7 67299410 67309084 + MGP_129S1SvImJ_P0084299 Vimp protein_coding protein_coding MGP_129S1SvImJ_T0084300.1 MGP_129S1SvImJ_G0032348.1 mouse_genomes_project 7 67299438 67307130 + Vimp protein_coding retained_intron MGP_129S1SvImJ_T0084301.1 MGP_129S1SvImJ_G0032348.1 mouse_genomes_project 7 67299439 67309082 + MGP_129S1SvImJ_P0084301 Vimp protein_coding protein_coding MGP_129S1SvImJ_T0084302.1 MGP_129S1SvImJ_G0032348.1 mouse_genomes_project 7 67299448 67308801 + MGP_129S1SvImJ_P0084302 Vimp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084303.1 MGP_129S1SvImJ_G0032348.1 mouse_genomes_project 7 67299475 67309091 + MGP_129S1SvImJ_P0084303 Vimp protein_coding protein_coding MGP_129S1SvImJ_T0085104.1 MGP_129S1SvImJ_G0032540.1 mouse_genomes_project 7 101219694 101228672 + MGP_129S1SvImJ_P0085104 Lrrc32 protein_coding protein_coding MGP_129S1SvImJ_T0085105.1 MGP_129S1SvImJ_G0032540.1 mouse_genomes_project 7 101220111 101232604 + MGP_129S1SvImJ_P0085105 Lrrc32 protein_coding protein_coding MGP_129S1SvImJ_T0085106.1 MGP_129S1SvImJ_G0032540.1 mouse_genomes_project 7 101224639 101232258 + MGP_129S1SvImJ_P0085106 Lrrc32 protein_coding protein_coding MGP_129S1SvImJ_T0085271.1 MGP_129S1SvImJ_G0032582.1 mouse_genomes_project 7 104248295 104263760 - MGP_129S1SvImJ_P0085271 Atg16l2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085272.1 MGP_129S1SvImJ_G0032582.1 mouse_genomes_project 7 104248518 104263821 - MGP_129S1SvImJ_P0085272 Atg16l2 protein_coding protein_coding MGP_129S1SvImJ_T0085273.1 MGP_129S1SvImJ_G0032582.1 mouse_genomes_project 7 104248520 104249363 - Atg16l2 protein_coding retained_intron MGP_129S1SvImJ_T0085274.1 MGP_129S1SvImJ_G0032582.1 mouse_genomes_project 7 104248520 104263804 - MGP_129S1SvImJ_P0085274 Atg16l2 protein_coding protein_coding MGP_129S1SvImJ_T0085275.1 MGP_129S1SvImJ_G0032582.1 mouse_genomes_project 7 104248529 104263984 - MGP_129S1SvImJ_P0085275 Atg16l2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085276.1 MGP_129S1SvImJ_G0032582.1 mouse_genomes_project 7 104248731 104249480 - Atg16l2 protein_coding retained_intron MGP_129S1SvImJ_T0085277.1 MGP_129S1SvImJ_G0032582.1 mouse_genomes_project 7 104249547 104251047 - Atg16l2 protein_coding retained_intron MGP_129S1SvImJ_T0085278.1 MGP_129S1SvImJ_G0032582.1 mouse_genomes_project 7 104250064 104251050 - Atg16l2 protein_coding retained_intron MGP_129S1SvImJ_T0085279.1 MGP_129S1SvImJ_G0032582.1 mouse_genomes_project 7 104250478 104251292 - Atg16l2 protein_coding retained_intron MGP_129S1SvImJ_T0085280.1 MGP_129S1SvImJ_G0032582.1 mouse_genomes_project 7 104250907 104258517 - Atg16l2 protein_coding retained_intron MGP_129S1SvImJ_T0085281.1 MGP_129S1SvImJ_G0032582.1 mouse_genomes_project 7 104251306 104258530 - MGP_129S1SvImJ_P0085281 Atg16l2 protein_coding protein_coding MGP_129S1SvImJ_T0085282.1 MGP_129S1SvImJ_G0032582.1 mouse_genomes_project 7 104253479 104258460 - Atg16l2 protein_coding retained_intron MGP_129S1SvImJ_T0085283.1 MGP_129S1SvImJ_G0032582.1 mouse_genomes_project 7 104257975 104258917 - Atg16l2 protein_coding retained_intron MGP_129S1SvImJ_T0085284.1 MGP_129S1SvImJ_G0032582.1 mouse_genomes_project 7 104258642 104263804 - MGP_129S1SvImJ_P0085284 Atg16l2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087627.1 MGP_129S1SvImJ_G0033233.1 mouse_genomes_project 7 146652395 146659524 + MGP_129S1SvImJ_P0087627 Cracr2b protein_coding protein_coding MGP_129S1SvImJ_T0087628.1 MGP_129S1SvImJ_G0033233.1 mouse_genomes_project 7 146653196 146656337 + MGP_129S1SvImJ_P0087628 Cracr2b protein_coding protein_coding MGP_129S1SvImJ_T0087629.1 MGP_129S1SvImJ_G0033233.1 mouse_genomes_project 7 146653261 146654770 + MGP_129S1SvImJ_P0087629 Cracr2b protein_coding protein_coding MGP_129S1SvImJ_T0087630.1 MGP_129S1SvImJ_G0033233.1 mouse_genomes_project 7 146654418 146656037 + MGP_129S1SvImJ_P0087630 Cracr2b protein_coding protein_coding MGP_129S1SvImJ_T0087631.1 MGP_129S1SvImJ_G0033233.1 mouse_genomes_project 7 146654718 146658983 + MGP_129S1SvImJ_P0087631 Cracr2b protein_coding protein_coding MGP_129S1SvImJ_T0087632.1 MGP_129S1SvImJ_G0033233.1 mouse_genomes_project 7 146655351 146656140 + Cracr2b protein_coding retained_intron MGP_129S1SvImJ_T0087633.1 MGP_129S1SvImJ_G0033233.1 mouse_genomes_project 7 146656401 146658588 + Cracr2b protein_coding retained_intron MGP_129S1SvImJ_T0087634.1 MGP_129S1SvImJ_G0033233.1 mouse_genomes_project 7 146656535 146659269 + Cracr2b protein_coding retained_intron MGP_129S1SvImJ_T0087635.1 MGP_129S1SvImJ_G0033233.1 mouse_genomes_project 7 146658584 146659524 + MGP_129S1SvImJ_P0087635 Cracr2b protein_coding protein_coding MGP_129S1SvImJ_T0005322.1 MGP_129S1SvImJ_G0004516.1 mouse_genomes_project 7 136838072 136839203 + Gm15677 antisense antisense MGP_129S1SvImJ_T0085459.1 MGP_129S1SvImJ_G0032631.1 mouse_genomes_project 7 105974787 105975756 - MGP_129S1SvImJ_P0085459 Olfr571 protein_coding protein_coding MGP_129S1SvImJ_T0015799.1 MGP_129S1SvImJ_G0013888.1 mouse_genomes_project 7 42904885 42905674 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008972.1 MGP_129S1SvImJ_G0007235.1 mouse_genomes_project 7 95293021 95296913 + Gm26981 lincRNA lincRNA MGP_129S1SvImJ_T0102679.1 MGP_129S1SvImJ_G0040512.1 mouse_genomes_project 7 9335369 9335657 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0081762.1 MGP_129S1SvImJ_G0031706.1 mouse_genomes_project 7 13949872 13951600 - Ccdc9 protein_coding retained_intron MGP_129S1SvImJ_T0081763.1 MGP_129S1SvImJ_G0031706.1 mouse_genomes_project 7 13949875 13962633 - MGP_129S1SvImJ_P0081763 Ccdc9 protein_coding protein_coding MGP_129S1SvImJ_T0081764.1 MGP_129S1SvImJ_G0031706.1 mouse_genomes_project 7 13950143 13962595 - MGP_129S1SvImJ_P0081764 Ccdc9 protein_coding protein_coding MGP_129S1SvImJ_T0081765.1 MGP_129S1SvImJ_G0031706.1 mouse_genomes_project 7 13951290 13960902 - MGP_129S1SvImJ_P0081765 Ccdc9 protein_coding protein_coding MGP_129S1SvImJ_T0081766.1 MGP_129S1SvImJ_G0031706.1 mouse_genomes_project 7 13951303 13956534 - Ccdc9 protein_coding retained_intron MGP_129S1SvImJ_T0081767.1 MGP_129S1SvImJ_G0031706.1 mouse_genomes_project 7 13951698 13954215 - MGP_129S1SvImJ_P0081767 Ccdc9 protein_coding protein_coding MGP_129S1SvImJ_T0081768.1 MGP_129S1SvImJ_G0031706.1 mouse_genomes_project 7 13951843 13952527 - Ccdc9 protein_coding retained_intron MGP_129S1SvImJ_T0081769.1 MGP_129S1SvImJ_G0031706.1 mouse_genomes_project 7 13952423 13957003 - Ccdc9 protein_coding retained_intron MGP_129S1SvImJ_T0081770.1 MGP_129S1SvImJ_G0031706.1 mouse_genomes_project 7 13956462 13957644 - Ccdc9 protein_coding processed_transcript MGP_129S1SvImJ_T0081771.1 MGP_129S1SvImJ_G0031706.1 mouse_genomes_project 7 13958348 13962623 - MGP_129S1SvImJ_P0081771 Ccdc9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081772.1 MGP_129S1SvImJ_G0031706.1 mouse_genomes_project 7 13958357 13961379 - MGP_129S1SvImJ_P0081772 Ccdc9 protein_coding protein_coding MGP_129S1SvImJ_T0081773.1 MGP_129S1SvImJ_G0031706.1 mouse_genomes_project 7 13958408 13962617 - MGP_129S1SvImJ_P0081773 Ccdc9 protein_coding protein_coding MGP_129S1SvImJ_T0081774.1 MGP_129S1SvImJ_G0031706.1 mouse_genomes_project 7 13958529 13962616 - Ccdc9 protein_coding retained_intron MGP_129S1SvImJ_T0081775.1 MGP_129S1SvImJ_G0031706.1 mouse_genomes_project 7 13958662 13961868 - MGP_129S1SvImJ_P0081775 Ccdc9 protein_coding protein_coding MGP_129S1SvImJ_T0015938.1 MGP_129S1SvImJ_G0014027.1 mouse_genomes_project 7 142411538 142412551 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011703.1 MGP_129S1SvImJ_G0009819.1 mouse_genomes_project 7 36227170 36227466 - Gm24550 misc_RNA misc_RNA MGP_129S1SvImJ_T0085855.1 MGP_129S1SvImJ_G0032853.1 mouse_genomes_project 7 113521269 113524608 - MGP_129S1SvImJ_P0085855 protein_coding protein_coding MGP_129S1SvImJ_T0002309.1 MGP_129S1SvImJ_G0002220.1 mouse_genomes_project 7 95189785 95190104 + TEC TEC MGP_129S1SvImJ_T0101354.1 MGP_129S1SvImJ_G0039421.1 mouse_genomes_project 7 128692756 128692899 + Gm23168 snoRNA snoRNA MGP_129S1SvImJ_T0081689.1 MGP_129S1SvImJ_G0031681.1 mouse_genomes_project 7 11724009 11766310 - MGP_129S1SvImJ_P0081689 Sult2a6 protein_coding protein_coding MGP_129S1SvImJ_T0081690.1 MGP_129S1SvImJ_G0031681.1 mouse_genomes_project 7 11724017 11766310 - MGP_129S1SvImJ_P0081690 Sult2a6 protein_coding protein_coding MGP_129S1SvImJ_T0102715.1 MGP_129S1SvImJ_G0040548.1 mouse_genomes_project 7 16139757 16149519 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0081490.1 MGP_129S1SvImJ_G0031594.1 mouse_genomes_project 7 3176039 3213844 - MGP_129S1SvImJ_P0081490 Zfp787 protein_coding protein_coding MGP_129S1SvImJ_T0083062.1 MGP_129S1SvImJ_G0032047.1 mouse_genomes_project 7 29885582 29887431 - MGP_129S1SvImJ_P0083062 Ffar3 protein_coding protein_coding MGP_129S1SvImJ_T0083063.1 MGP_129S1SvImJ_G0032047.1 mouse_genomes_project 7 29886186 29887420 - MGP_129S1SvImJ_P0083063 Ffar3 protein_coding protein_coding MGP_129S1SvImJ_T0010952.1 MGP_129S1SvImJ_G0009068.1 mouse_genomes_project 7 145033492 145033564 - Mir202 miRNA miRNA MGP_129S1SvImJ_T0083056.1 MGP_129S1SvImJ_G0032046.1 mouse_genomes_project 7 29844933 29850361 - MGP_129S1SvImJ_P0083056 Ffar2 protein_coding protein_coding MGP_129S1SvImJ_T0083057.1 MGP_129S1SvImJ_G0032046.1 mouse_genomes_project 7 29844942 29847721 - MGP_129S1SvImJ_P0083057 Ffar2 protein_coding protein_coding MGP_129S1SvImJ_T0083058.1 MGP_129S1SvImJ_G0032046.1 mouse_genomes_project 7 29845697 29848234 - MGP_129S1SvImJ_P0083058 Ffar2 protein_coding protein_coding MGP_129S1SvImJ_T0083059.1 MGP_129S1SvImJ_G0032046.1 mouse_genomes_project 7 29846149 29847720 - MGP_129S1SvImJ_P0083059 Ffar2 protein_coding protein_coding MGP_129S1SvImJ_T0083060.1 MGP_129S1SvImJ_G0032046.1 mouse_genomes_project 7 29846267 29847559 - MGP_129S1SvImJ_P0083060 Ffar2 protein_coding protein_coding MGP_129S1SvImJ_T0083061.1 MGP_129S1SvImJ_G0032046.1 mouse_genomes_project 7 29846294 29847729 - MGP_129S1SvImJ_P0083061 Ffar2 protein_coding protein_coding MGP_129S1SvImJ_T0009063.1 MGP_129S1SvImJ_G0007293.1 mouse_genomes_project 7 140498239 140514633 - 5830432E09Rik lincRNA lincRNA MGP_129S1SvImJ_T0009064.1 MGP_129S1SvImJ_G0007293.1 mouse_genomes_project 7 140510806 140514664 - 5830432E09Rik lincRNA lincRNA MGP_129S1SvImJ_T0087101.1 MGP_129S1SvImJ_G0033094.1 mouse_genomes_project 7 135321152 135376253 + MGP_129S1SvImJ_P0087101 Btbd16 protein_coding protein_coding MGP_129S1SvImJ_T0082580.1 MGP_129S1SvImJ_G0031931.1 mouse_genomes_project 7 26886504 26930519 + MGP_129S1SvImJ_P0082580 9530053A07Rik protein_coding protein_coding MGP_129S1SvImJ_T0082581.1 MGP_129S1SvImJ_G0031931.1 mouse_genomes_project 7 26886854 26900802 + 9530053A07Rik protein_coding retained_intron MGP_129S1SvImJ_T0082582.1 MGP_129S1SvImJ_G0031931.1 mouse_genomes_project 7 26886854 26898493 + 9530053A07Rik protein_coding retained_intron MGP_129S1SvImJ_T0082583.1 MGP_129S1SvImJ_G0031931.1 mouse_genomes_project 7 26886854 26930503 + MGP_129S1SvImJ_P0082583 9530053A07Rik protein_coding protein_coding MGP_129S1SvImJ_T0002316.1 MGP_129S1SvImJ_G0002227.1 mouse_genomes_project 7 125879069 125880683 - TEC TEC MGP_129S1SvImJ_T0082951.1 MGP_129S1SvImJ_G0032026.1 mouse_genomes_project 7 29557207 29560475 + Hspb6 protein_coding processed_transcript MGP_129S1SvImJ_T0082952.1 MGP_129S1SvImJ_G0032026.1 mouse_genomes_project 7 29557553 29560474 + Hspb6 protein_coding processed_transcript MGP_129S1SvImJ_T0082953.1 MGP_129S1SvImJ_G0032026.1 mouse_genomes_project 7 29558298 29560478 + MGP_129S1SvImJ_P0082953 Hspb6 protein_coding protein_coding MGP_129S1SvImJ_T0082954.1 MGP_129S1SvImJ_G0032026.1 mouse_genomes_project 7 29558919 29559679 + Hspb6 protein_coding processed_transcript MGP_129S1SvImJ_T0084472.1 MGP_129S1SvImJ_G0032380.1 mouse_genomes_project 7 80653371 80666837 - MGP_129S1SvImJ_P0084472 protein_coding protein_coding MGP_129S1SvImJ_T0084473.1 MGP_129S1SvImJ_G0032380.1 mouse_genomes_project 7 80656132 80679852 - MGP_129S1SvImJ_P0084473 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0084474.1 MGP_129S1SvImJ_G0032380.1 mouse_genomes_project 7 80660684 80675887 - MGP_129S1SvImJ_P0084474 protein_coding protein_coding MGP_129S1SvImJ_T0102730.1 MGP_129S1SvImJ_G0040562.1 mouse_genomes_project 7 33143943 33144921 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0084047.1 MGP_129S1SvImJ_G0032295.1 mouse_genomes_project 7 49435525 49453167 - MGP_129S1SvImJ_P0084047 Csrp3 protein_coding protein_coding MGP_129S1SvImJ_T0084048.1 MGP_129S1SvImJ_G0032295.1 mouse_genomes_project 7 49435525 49448787 - MGP_129S1SvImJ_P0084048 Csrp3 protein_coding protein_coding MGP_129S1SvImJ_T0082834.1 MGP_129S1SvImJ_G0031997.1 mouse_genomes_project 7 29008172 29011458 - Zfp82 protein_coding retained_intron MGP_129S1SvImJ_T0082835.1 MGP_129S1SvImJ_G0031997.1 mouse_genomes_project 7 29009722 29033106 - MGP_129S1SvImJ_P0082835 Zfp82 protein_coding protein_coding MGP_129S1SvImJ_T0082837.1 MGP_129S1SvImJ_G0031997.1 mouse_genomes_project 7 29009729 29017635 - Zfp82 protein_coding retained_intron MGP_129S1SvImJ_T0082838.1 MGP_129S1SvImJ_G0031997.1 mouse_genomes_project 7 29009731 29032346 - MGP_129S1SvImJ_P0082838 Zfp82 protein_coding protein_coding MGP_129S1SvImJ_T0082839.1 MGP_129S1SvImJ_G0031997.1 mouse_genomes_project 7 29010964 29033014 - MGP_129S1SvImJ_P0082839 Zfp82 protein_coding protein_coding MGP_129S1SvImJ_T0082840.1 MGP_129S1SvImJ_G0031997.1 mouse_genomes_project 7 29012934 29033032 - MGP_129S1SvImJ_P0082840 Zfp82 protein_coding protein_coding MGP_129S1SvImJ_T0087808.1 MGP_129S1SvImJ_G0033269.1 mouse_genomes_project 7 148350028 148355437 - MGP_129S1SvImJ_P0087808 Trpm5 protein_coding protein_coding MGP_129S1SvImJ_T0087815.1 MGP_129S1SvImJ_G0033269.1 mouse_genomes_project 7 148351966 148354913 - MGP_129S1SvImJ_P0087815 Trpm5 protein_coding protein_coding MGP_129S1SvImJ_T0087816.1 MGP_129S1SvImJ_G0033269.1 mouse_genomes_project 7 148352092 148355729 - Trpm5 protein_coding retained_intron MGP_129S1SvImJ_T0087817.1 MGP_129S1SvImJ_G0033269.1 mouse_genomes_project 7 148352404 148368090 - Trpm5 protein_coding retained_intron MGP_129S1SvImJ_T0087818.1 MGP_129S1SvImJ_G0033269.1 mouse_genomes_project 7 148352664 148375518 - MGP_129S1SvImJ_P0087818 Trpm5 protein_coding protein_coding MGP_129S1SvImJ_T0087819.1 MGP_129S1SvImJ_G0033269.1 mouse_genomes_project 7 148353053 148368005 - Trpm5 protein_coding retained_intron MGP_129S1SvImJ_T0087820.1 MGP_129S1SvImJ_G0033269.1 mouse_genomes_project 7 148353217 148375482 - MGP_129S1SvImJ_P0087820 Trpm5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087821.1 MGP_129S1SvImJ_G0033269.1 mouse_genomes_project 7 148361591 148362798 - Trpm5 protein_coding retained_intron MGP_129S1SvImJ_T0005209.1 MGP_129S1SvImJ_G0004436.1 mouse_genomes_project 7 30008649 30012589 + antisense antisense MGP_129S1SvImJ_T0008852.1 MGP_129S1SvImJ_G0007155.1 mouse_genomes_project 7 36790756 36796705 + Gm28077 lincRNA lincRNA MGP_129S1SvImJ_T0086909.1 MGP_129S1SvImJ_G0033062.1 mouse_genomes_project 7 132277643 132280198 - MGP_129S1SvImJ_P0086909 Vkorc1 protein_coding protein_coding MGP_129S1SvImJ_T0086910.1 MGP_129S1SvImJ_G0033062.1 mouse_genomes_project 7 132277645 132279832 - MGP_129S1SvImJ_P0086910 Vkorc1 protein_coding protein_coding MGP_129S1SvImJ_T0086911.1 MGP_129S1SvImJ_G0033062.1 mouse_genomes_project 7 132277818 132279890 - MGP_129S1SvImJ_P0086911 Vkorc1 protein_coding protein_coding MGP_129S1SvImJ_T0015750.1 MGP_129S1SvImJ_G0013839.1 mouse_genomes_project 7 23026259 23026596 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082923.1 MGP_129S1SvImJ_G0032019.1 mouse_genomes_project 7 29409752 29416765 + MGP_129S1SvImJ_P0082923 Nfkbid protein_coding protein_coding MGP_129S1SvImJ_T0082924.1 MGP_129S1SvImJ_G0032019.1 mouse_genomes_project 7 29410426 29416764 + MGP_129S1SvImJ_P0082924 Nfkbid protein_coding protein_coding MGP_129S1SvImJ_T0082925.1 MGP_129S1SvImJ_G0032019.1 mouse_genomes_project 7 29411295 29416765 + MGP_129S1SvImJ_P0082925 Nfkbid protein_coding protein_coding MGP_129S1SvImJ_T0082926.1 MGP_129S1SvImJ_G0032019.1 mouse_genomes_project 7 29413590 29414294 + Nfkbid protein_coding retained_intron MGP_129S1SvImJ_T0081180.1 MGP_129S1SvImJ_G0031517.1 mouse_genomes_project 7 236041 283888 + MGP_129S1SvImJ_P0081180 Cacng7 protein_coding protein_coding MGP_129S1SvImJ_T0081181.1 MGP_129S1SvImJ_G0031517.1 mouse_genomes_project 7 241268 282562 + Cacng7 protein_coding retained_intron MGP_129S1SvImJ_T0015795.1 MGP_129S1SvImJ_G0013884.1 mouse_genomes_project 7 42396051 42396306 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084071.1 MGP_129S1SvImJ_G0032298.1 mouse_genomes_project 7 50292573 50297889 - MGP_129S1SvImJ_P0084071 Dbx1 protein_coding protein_coding MGP_129S1SvImJ_T0085625.1 MGP_129S1SvImJ_G0032755.1 mouse_genomes_project 7 108816249 108840903 - MGP_129S1SvImJ_P0085625 Apbb1 protein_coding protein_coding MGP_129S1SvImJ_T0085626.1 MGP_129S1SvImJ_G0032755.1 mouse_genomes_project 7 108816250 108827307 - MGP_129S1SvImJ_P0085626 Apbb1 protein_coding protein_coding MGP_129S1SvImJ_T0085627.1 MGP_129S1SvImJ_G0032755.1 mouse_genomes_project 7 108816250 108827523 - MGP_129S1SvImJ_P0085627 Apbb1 protein_coding protein_coding MGP_129S1SvImJ_T0085628.1 MGP_129S1SvImJ_G0032755.1 mouse_genomes_project 7 108816250 108826787 - MGP_129S1SvImJ_P0085628 Apbb1 protein_coding protein_coding MGP_129S1SvImJ_T0085629.1 MGP_129S1SvImJ_G0032755.1 mouse_genomes_project 7 108816250 108840528 - MGP_129S1SvImJ_P0085629 Apbb1 protein_coding protein_coding MGP_129S1SvImJ_T0085630.1 MGP_129S1SvImJ_G0032755.1 mouse_genomes_project 7 108816252 108840487 - MGP_129S1SvImJ_P0085630 Apbb1 protein_coding protein_coding MGP_129S1SvImJ_T0085631.1 MGP_129S1SvImJ_G0032755.1 mouse_genomes_project 7 108816253 108826966 - Apbb1 protein_coding retained_intron MGP_129S1SvImJ_T0085632.1 MGP_129S1SvImJ_G0032755.1 mouse_genomes_project 7 108816269 108840741 - MGP_129S1SvImJ_P0085632 Apbb1 protein_coding protein_coding MGP_129S1SvImJ_T0085633.1 MGP_129S1SvImJ_G0032755.1 mouse_genomes_project 7 108816289 108827302 - MGP_129S1SvImJ_P0085633 Apbb1 protein_coding protein_coding MGP_129S1SvImJ_T0085634.1 MGP_129S1SvImJ_G0032755.1 mouse_genomes_project 7 108816584 108826787 - MGP_129S1SvImJ_P0085634 Apbb1 protein_coding protein_coding MGP_129S1SvImJ_T0085635.1 MGP_129S1SvImJ_G0032755.1 mouse_genomes_project 7 108816927 108823515 - Apbb1 protein_coding retained_intron MGP_129S1SvImJ_T0085636.1 MGP_129S1SvImJ_G0032755.1 mouse_genomes_project 7 108817234 108825304 - Apbb1 protein_coding retained_intron MGP_129S1SvImJ_T0085637.1 MGP_129S1SvImJ_G0032755.1 mouse_genomes_project 7 108823599 108840442 - MGP_129S1SvImJ_P0085637 Apbb1 protein_coding protein_coding MGP_129S1SvImJ_T0085638.1 MGP_129S1SvImJ_G0032755.1 mouse_genomes_project 7 108824116 108826973 - MGP_129S1SvImJ_P0085638 Apbb1 protein_coding protein_coding MGP_129S1SvImJ_T0085639.1 MGP_129S1SvImJ_G0032755.1 mouse_genomes_project 7 108824559 108827275 - MGP_129S1SvImJ_P0085639 Apbb1 protein_coding protein_coding MGP_129S1SvImJ_T0085640.1 MGP_129S1SvImJ_G0032755.1 mouse_genomes_project 7 108824674 108827283 - MGP_129S1SvImJ_P0085640 Apbb1 protein_coding protein_coding MGP_129S1SvImJ_T0085641.1 MGP_129S1SvImJ_G0032755.1 mouse_genomes_project 7 108825103 108827602 - MGP_129S1SvImJ_P0085641 Apbb1 protein_coding protein_coding MGP_129S1SvImJ_T0085642.1 MGP_129S1SvImJ_G0032755.1 mouse_genomes_project 7 108825177 108826680 - Apbb1 protein_coding retained_intron MGP_129S1SvImJ_T0085643.1 MGP_129S1SvImJ_G0032755.1 mouse_genomes_project 7 108833233 108840438 - MGP_129S1SvImJ_P0085643 Apbb1 protein_coding protein_coding MGP_129S1SvImJ_T0086973.1 MGP_129S1SvImJ_G0033075.1 mouse_genomes_project 7 132611300 132612247 - MGP_129S1SvImJ_P0086973 Cox6a2 protein_coding protein_coding MGP_129S1SvImJ_T0082099.1 MGP_129S1SvImJ_G0031809.1 mouse_genomes_project 7 21879610 21881921 + MGP_129S1SvImJ_P0082099 Vmn1r172 protein_coding protein_coding MGP_129S1SvImJ_T0015943.1 MGP_129S1SvImJ_G0014032.1 mouse_genomes_project 7 148026647 148027244 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084969.1 MGP_129S1SvImJ_G0032511.1 mouse_genomes_project 7 95117507 95121079 + Ccdc90b protein_coding processed_transcript MGP_129S1SvImJ_T0084970.1 MGP_129S1SvImJ_G0032511.1 mouse_genomes_project 7 95117507 95141019 + MGP_129S1SvImJ_P0084970 Ccdc90b protein_coding protein_coding MGP_129S1SvImJ_T0084971.1 MGP_129S1SvImJ_G0032511.1 mouse_genomes_project 7 95117507 95141019 + MGP_129S1SvImJ_P0084971 Ccdc90b protein_coding protein_coding MGP_129S1SvImJ_T0002273.1 MGP_129S1SvImJ_G0002185.1 mouse_genomes_project 7 74958519 74960591 + TEC TEC MGP_129S1SvImJ_T0083484.1 MGP_129S1SvImJ_G0032134.1 mouse_genomes_project 7 43662039 43677851 + MGP_129S1SvImJ_P0083484 Ceacam18 protein_coding protein_coding MGP_129S1SvImJ_T0085985.1 MGP_129S1SvImJ_G0032883.1 mouse_genomes_project 7 118215982 118228789 - MGP_129S1SvImJ_P0085985 Cyp2r1 protein_coding protein_coding MGP_129S1SvImJ_T0085986.1 MGP_129S1SvImJ_G0032883.1 mouse_genomes_project 7 118216038 118228787 - MGP_129S1SvImJ_P0085986 Cyp2r1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085987.1 MGP_129S1SvImJ_G0032883.1 mouse_genomes_project 7 118216049 118228779 - MGP_129S1SvImJ_P0085987 Cyp2r1 protein_coding protein_coding MGP_129S1SvImJ_T0085988.1 MGP_129S1SvImJ_G0032883.1 mouse_genomes_project 7 118216063 118220553 - Cyp2r1 protein_coding processed_transcript MGP_129S1SvImJ_T0085989.1 MGP_129S1SvImJ_G0032883.1 mouse_genomes_project 7 118216063 118220549 - MGP_129S1SvImJ_P0085989 Cyp2r1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085990.1 MGP_129S1SvImJ_G0032883.1 mouse_genomes_project 7 118216065 118228779 - MGP_129S1SvImJ_P0085990 Cyp2r1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084260.1 MGP_129S1SvImJ_G0032341.1 mouse_genomes_project 7 66020856 66026798 - MGP_129S1SvImJ_P0084260 Ndnl2 protein_coding protein_coding MGP_129S1SvImJ_T0010916.1 MGP_129S1SvImJ_G0009032.1 mouse_genomes_project 7 65334581 65334687 + Mir211 miRNA miRNA MGP_129S1SvImJ_T0018470.1 MGP_129S1SvImJ_G0015701.1 mouse_genomes_project 7 147142404 147143200 - processed_transcript processed_transcript MGP_129S1SvImJ_T0085540.1 MGP_129S1SvImJ_G0032706.1 mouse_genomes_project 7 107402184 107403135 - MGP_129S1SvImJ_P0085540 Olfr648 protein_coding protein_coding MGP_129S1SvImJ_T0005168.1 MGP_129S1SvImJ_G0004408.1 mouse_genomes_project 7 4064689 4088472 - Zim3 antisense antisense MGP_129S1SvImJ_T0005169.1 MGP_129S1SvImJ_G0004408.1 mouse_genomes_project 7 4072387 4087505 - Zim3 antisense antisense MGP_129S1SvImJ_T0005170.1 MGP_129S1SvImJ_G0004408.1 mouse_genomes_project 7 4088112 4089229 - Zim3 antisense antisense MGP_129S1SvImJ_T0085328.1 MGP_129S1SvImJ_G0032590.1 mouse_genomes_project 7 104870038 104883976 - MGP_129S1SvImJ_P0085328 Folr1 protein_coding protein_coding MGP_129S1SvImJ_T0085329.1 MGP_129S1SvImJ_G0032590.1 mouse_genomes_project 7 104870038 104880727 - MGP_129S1SvImJ_P0085329 Folr1 protein_coding protein_coding MGP_129S1SvImJ_T0085330.1 MGP_129S1SvImJ_G0032590.1 mouse_genomes_project 7 104870038 104877627 - MGP_129S1SvImJ_P0085330 Folr1 protein_coding protein_coding MGP_129S1SvImJ_T0085331.1 MGP_129S1SvImJ_G0032590.1 mouse_genomes_project 7 104870038 104884000 - MGP_129S1SvImJ_P0085331 Folr1 protein_coding protein_coding MGP_129S1SvImJ_T0085332.1 MGP_129S1SvImJ_G0032590.1 mouse_genomes_project 7 104870038 104884081 - MGP_129S1SvImJ_P0085332 Folr1 protein_coding protein_coding MGP_129S1SvImJ_T0085333.1 MGP_129S1SvImJ_G0032590.1 mouse_genomes_project 7 104870038 104884074 - MGP_129S1SvImJ_P0085333 Folr1 protein_coding protein_coding MGP_129S1SvImJ_T0085334.1 MGP_129S1SvImJ_G0032590.1 mouse_genomes_project 7 104870811 104882844 - MGP_129S1SvImJ_P0085334 Folr1 protein_coding protein_coding MGP_129S1SvImJ_T0085335.1 MGP_129S1SvImJ_G0032590.1 mouse_genomes_project 7 104870821 104884007 - MGP_129S1SvImJ_P0085335 Folr1 protein_coding protein_coding MGP_129S1SvImJ_T0085336.1 MGP_129S1SvImJ_G0032590.1 mouse_genomes_project 7 104870880 104884079 - MGP_129S1SvImJ_P0085336 Folr1 protein_coding protein_coding MGP_129S1SvImJ_T0085337.1 MGP_129S1SvImJ_G0032590.1 mouse_genomes_project 7 104871113 104882617 - MGP_129S1SvImJ_P0085337 Folr1 protein_coding protein_coding MGP_129S1SvImJ_T0085338.1 MGP_129S1SvImJ_G0032590.1 mouse_genomes_project 7 104877404 104884081 - MGP_129S1SvImJ_P0085338 Folr1 protein_coding protein_coding MGP_129S1SvImJ_T0085339.1 MGP_129S1SvImJ_G0032590.1 mouse_genomes_project 7 104877406 104882311 - MGP_129S1SvImJ_P0085339 Folr1 protein_coding protein_coding MGP_129S1SvImJ_T0085340.1 MGP_129S1SvImJ_G0032590.1 mouse_genomes_project 7 104877409 104884080 - MGP_129S1SvImJ_P0085340 Folr1 protein_coding protein_coding MGP_129S1SvImJ_T0085341.1 MGP_129S1SvImJ_G0032590.1 mouse_genomes_project 7 104877442 104881960 - MGP_129S1SvImJ_P0085341 Folr1 protein_coding protein_coding MGP_129S1SvImJ_T0085342.1 MGP_129S1SvImJ_G0032590.1 mouse_genomes_project 7 104877481 104882615 - MGP_129S1SvImJ_P0085342 Folr1 protein_coding protein_coding MGP_129S1SvImJ_T0085343.1 MGP_129S1SvImJ_G0032590.1 mouse_genomes_project 7 104877559 104883877 - MGP_129S1SvImJ_P0085343 Folr1 protein_coding protein_coding MGP_129S1SvImJ_T0085344.1 MGP_129S1SvImJ_G0032590.1 mouse_genomes_project 7 104881757 104883394 - Folr1 protein_coding processed_transcript MGP_129S1SvImJ_T0015725.1 MGP_129S1SvImJ_G0013814.1 mouse_genomes_project 7 11488151 11488365 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010895.1 MGP_129S1SvImJ_G0009011.1 mouse_genomes_project 7 55001491 55001678 - Gm25956 miRNA miRNA MGP_129S1SvImJ_T0082551.1 MGP_129S1SvImJ_G0031920.1 mouse_genomes_project 7 26340377 26358639 - MGP_129S1SvImJ_P0082551 Map3k10 protein_coding protein_coding MGP_129S1SvImJ_T0082552.1 MGP_129S1SvImJ_G0031920.1 mouse_genomes_project 7 26340666 26358643 - MGP_129S1SvImJ_P0082552 Map3k10 protein_coding protein_coding MGP_129S1SvImJ_T0082553.1 MGP_129S1SvImJ_G0031920.1 mouse_genomes_project 7 26348141 26349091 - Map3k10 protein_coding retained_intron MGP_129S1SvImJ_T0082554.1 MGP_129S1SvImJ_G0031920.1 mouse_genomes_project 7 26348163 26358402 - Map3k10 protein_coding retained_intron MGP_129S1SvImJ_T0082555.1 MGP_129S1SvImJ_G0031920.1 mouse_genomes_project 7 26352184 26358626 - MGP_129S1SvImJ_P0082555 Map3k10 protein_coding protein_coding MGP_129S1SvImJ_T0086046.1 MGP_129S1SvImJ_G0032890.1 mouse_genomes_project 7 120068651 120071875 - MGP_129S1SvImJ_P0086046 Rps13 protein_coding protein_coding MGP_129S1SvImJ_T0086047.1 MGP_129S1SvImJ_G0032890.1 mouse_genomes_project 7 120068656 120071813 - MGP_129S1SvImJ_P0086047 Rps13 protein_coding protein_coding MGP_129S1SvImJ_T0086048.1 MGP_129S1SvImJ_G0032890.1 mouse_genomes_project 7 120068657 120070864 - Rps13 protein_coding retained_intron MGP_129S1SvImJ_T0086049.1 MGP_129S1SvImJ_G0032890.1 mouse_genomes_project 7 120068658 120071810 - Rps13 protein_coding retained_intron MGP_129S1SvImJ_T0086050.1 MGP_129S1SvImJ_G0032890.1 mouse_genomes_project 7 120068658 120071815 - Rps13 protein_coding retained_intron MGP_129S1SvImJ_T0086051.1 MGP_129S1SvImJ_G0032890.1 mouse_genomes_project 7 120068658 120071846 - MGP_129S1SvImJ_P0086051 Rps13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086052.1 MGP_129S1SvImJ_G0032890.1 mouse_genomes_project 7 120069197 120071797 - Rps13 protein_coding retained_intron MGP_129S1SvImJ_T0086053.1 MGP_129S1SvImJ_G0032890.1 mouse_genomes_project 7 120070721 120071802 - Rps13 protein_coding retained_intron MGP_129S1SvImJ_T0085899.1 MGP_129S1SvImJ_G0032863.1 mouse_genomes_project 7 114536797 114564188 + MGP_129S1SvImJ_P0085899 Ctr9 protein_coding protein_coding MGP_129S1SvImJ_T0085900.1 MGP_129S1SvImJ_G0032863.1 mouse_genomes_project 7 114536841 114555462 + Ctr9 protein_coding retained_intron MGP_129S1SvImJ_T0085901.1 MGP_129S1SvImJ_G0032863.1 mouse_genomes_project 7 114536859 114538656 + Ctr9 protein_coding retained_intron MGP_129S1SvImJ_T0085902.1 MGP_129S1SvImJ_G0032863.1 mouse_genomes_project 7 114538061 114541903 + Ctr9 protein_coding processed_transcript MGP_129S1SvImJ_T0085903.1 MGP_129S1SvImJ_G0032863.1 mouse_genomes_project 7 114541882 114543221 + Ctr9 protein_coding retained_intron MGP_129S1SvImJ_T0085904.1 MGP_129S1SvImJ_G0032863.1 mouse_genomes_project 7 114554120 114554633 + Ctr9 protein_coding retained_intron MGP_129S1SvImJ_T0085905.1 MGP_129S1SvImJ_G0032863.1 mouse_genomes_project 7 114554120 114555795 + Ctr9 protein_coding retained_intron MGP_129S1SvImJ_T0085906.1 MGP_129S1SvImJ_G0032863.1 mouse_genomes_project 7 114558808 114560181 + Ctr9 protein_coding processed_transcript MGP_129S1SvImJ_T0086704.1 MGP_129S1SvImJ_G0033019.1 mouse_genomes_project 7 131365138 131367658 - MGP_129S1SvImJ_P0086704 Zg16 protein_coding protein_coding MGP_129S1SvImJ_T0086705.1 MGP_129S1SvImJ_G0033019.1 mouse_genomes_project 7 131365138 131366960 - MGP_129S1SvImJ_P0086705 Zg16 protein_coding protein_coding MGP_129S1SvImJ_T0084413.1 MGP_129S1SvImJ_G0032370.1 mouse_genomes_project 7 75319193 75360039 + MGP_129S1SvImJ_P0084413 Fam174b protein_coding protein_coding MGP_129S1SvImJ_T0084414.1 MGP_129S1SvImJ_G0032370.1 mouse_genomes_project 7 75347821 75358277 + MGP_129S1SvImJ_P0084414 Fam174b protein_coding protein_coding MGP_129S1SvImJ_T0084415.1 MGP_129S1SvImJ_G0032370.1 mouse_genomes_project 7 75347885 75359138 + Fam174b protein_coding retained_intron MGP_129S1SvImJ_T0083536.1 MGP_129S1SvImJ_G0032158.1 mouse_genomes_project 7 44466332 44522585 + MGP_129S1SvImJ_P0083536 Shank1 protein_coding protein_coding MGP_129S1SvImJ_T0083537.1 MGP_129S1SvImJ_G0032158.1 mouse_genomes_project 7 44468752 44519651 + MGP_129S1SvImJ_P0083537 Shank1 protein_coding protein_coding MGP_129S1SvImJ_T0083538.1 MGP_129S1SvImJ_G0032158.1 mouse_genomes_project 7 44468771 44519501 + MGP_129S1SvImJ_P0083538 Shank1 protein_coding protein_coding MGP_129S1SvImJ_T0083539.1 MGP_129S1SvImJ_G0032158.1 mouse_genomes_project 7 44496643 44504366 + Shank1 protein_coding processed_transcript MGP_129S1SvImJ_T0083540.1 MGP_129S1SvImJ_G0032158.1 mouse_genomes_project 7 44502762 44512052 + Shank1 protein_coding retained_intron MGP_129S1SvImJ_T0083541.1 MGP_129S1SvImJ_G0032158.1 mouse_genomes_project 7 44511455 44512751 + Shank1 protein_coding retained_intron MGP_129S1SvImJ_T0101318.1 MGP_129S1SvImJ_G0039385.1 mouse_genomes_project 7 60146980 60147068 - Gm22496 snoRNA snoRNA MGP_129S1SvImJ_T0102666.1 MGP_129S1SvImJ_G0040499.1 mouse_genomes_project 7 1138248 1139091 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085463.1 MGP_129S1SvImJ_G0032635.1 mouse_genomes_project 7 106036933 106037872 + MGP_129S1SvImJ_P0085463 Olfr576 protein_coding protein_coding MGP_129S1SvImJ_T0085464.1 MGP_129S1SvImJ_G0032635.1 mouse_genomes_project 7 106036933 106047358 + MGP_129S1SvImJ_P0085464 Olfr576 protein_coding protein_coding MGP_129S1SvImJ_T0085742.1 MGP_129S1SvImJ_G0032792.1 mouse_genomes_project 7 110483745 110484849 + MGP_129S1SvImJ_P0085742 Olfr716 protein_coding protein_coding MGP_129S1SvImJ_T0100102.1 MGP_129S1SvImJ_G0038169.1 mouse_genomes_project 7 147677468 147677576 + Gm26143 snRNA snRNA MGP_129S1SvImJ_T0086106.1 MGP_129S1SvImJ_G0032903.1 mouse_genomes_project 7 122574543 122605856 + MGP_129S1SvImJ_P0086106 Ccp110 protein_coding protein_coding MGP_129S1SvImJ_T0086107.1 MGP_129S1SvImJ_G0032903.1 mouse_genomes_project 7 122577413 122605853 + MGP_129S1SvImJ_P0086107 Ccp110 protein_coding protein_coding MGP_129S1SvImJ_T0086108.1 MGP_129S1SvImJ_G0032903.1 mouse_genomes_project 7 122590443 122605848 + Ccp110 protein_coding retained_intron MGP_129S1SvImJ_T0086109.1 MGP_129S1SvImJ_G0032903.1 mouse_genomes_project 7 122594773 122605856 + Ccp110 protein_coding retained_intron MGP_129S1SvImJ_T0086110.1 MGP_129S1SvImJ_G0032903.1 mouse_genomes_project 7 122599075 122601294 + Ccp110 protein_coding retained_intron MGP_129S1SvImJ_T0087670.1 MGP_129S1SvImJ_G0033243.1 mouse_genomes_project 7 147146835 147203851 + MGP_129S1SvImJ_P0087670 Brsk2 protein_coding protein_coding MGP_129S1SvImJ_T0087671.1 MGP_129S1SvImJ_G0033243.1 mouse_genomes_project 7 147146835 147209092 + MGP_129S1SvImJ_P0087671 Brsk2 protein_coding protein_coding MGP_129S1SvImJ_T0087672.1 MGP_129S1SvImJ_G0033243.1 mouse_genomes_project 7 147149587 147204018 + MGP_129S1SvImJ_P0087672 Brsk2 protein_coding protein_coding MGP_129S1SvImJ_T0087673.1 MGP_129S1SvImJ_G0033243.1 mouse_genomes_project 7 147149669 147207775 + MGP_129S1SvImJ_P0087673 Brsk2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087674.1 MGP_129S1SvImJ_G0033243.1 mouse_genomes_project 7 147149745 147205796 + MGP_129S1SvImJ_P0087674 Brsk2 protein_coding protein_coding MGP_129S1SvImJ_T0087675.1 MGP_129S1SvImJ_G0033243.1 mouse_genomes_project 7 147149748 147209093 + MGP_129S1SvImJ_P0087675 Brsk2 protein_coding protein_coding MGP_129S1SvImJ_T0087676.1 MGP_129S1SvImJ_G0033243.1 mouse_genomes_project 7 147149748 147207078 + MGP_129S1SvImJ_P0087676 Brsk2 protein_coding protein_coding MGP_129S1SvImJ_T0087677.1 MGP_129S1SvImJ_G0033243.1 mouse_genomes_project 7 147186382 147206993 + MGP_129S1SvImJ_P0087677 Brsk2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087678.1 MGP_129S1SvImJ_G0033243.1 mouse_genomes_project 7 147189694 147206993 + MGP_129S1SvImJ_P0087678 Brsk2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087679.1 MGP_129S1SvImJ_G0033243.1 mouse_genomes_project 7 147189734 147208017 + MGP_129S1SvImJ_P0087679 Brsk2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087680.1 MGP_129S1SvImJ_G0033243.1 mouse_genomes_project 7 147190555 147206993 + MGP_129S1SvImJ_P0087680 Brsk2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087681.1 MGP_129S1SvImJ_G0033243.1 mouse_genomes_project 7 147197999 147206996 + MGP_129S1SvImJ_P0087681 Brsk2 protein_coding protein_coding MGP_129S1SvImJ_T0087682.1 MGP_129S1SvImJ_G0033243.1 mouse_genomes_project 7 147198055 147207322 + MGP_129S1SvImJ_P0087682 Brsk2 protein_coding protein_coding MGP_129S1SvImJ_T0087683.1 MGP_129S1SvImJ_G0033243.1 mouse_genomes_project 7 147202315 147208913 + Brsk2 protein_coding processed_transcript MGP_129S1SvImJ_T0087684.1 MGP_129S1SvImJ_G0033243.1 mouse_genomes_project 7 147202343 147207521 + Brsk2 protein_coding processed_transcript MGP_129S1SvImJ_T0087685.1 MGP_129S1SvImJ_G0033243.1 mouse_genomes_project 7 147203506 147206287 + MGP_129S1SvImJ_P0087685 Brsk2 protein_coding protein_coding MGP_129S1SvImJ_T0081470.1 MGP_129S1SvImJ_G0031582.1 mouse_genomes_project 7 2022547 2026602 + MGP_129S1SvImJ_P0081470 Ccdc106 protein_coding protein_coding MGP_129S1SvImJ_T0085721.1 MGP_129S1SvImJ_G0032772.1 mouse_genomes_project 7 110112454 110113390 - MGP_129S1SvImJ_P0085721 Olfr698 protein_coding protein_coding MGP_129S1SvImJ_T0084261.1 MGP_129S1SvImJ_G0032342.1 mouse_genomes_project 7 66463803 66545140 - MGP_129S1SvImJ_P0084261 Tjp1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0084262.1 MGP_129S1SvImJ_G0032342.1 mouse_genomes_project 7 66463810 66545543 - MGP_129S1SvImJ_P0084262 Tjp1 protein_coding protein_coding MGP_129S1SvImJ_T0084263.1 MGP_129S1SvImJ_G0032342.1 mouse_genomes_project 7 66464353 66545319 - MGP_129S1SvImJ_P0084263 Tjp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084264.1 MGP_129S1SvImJ_G0032342.1 mouse_genomes_project 7 66464353 66545319 - MGP_129S1SvImJ_P0084264 Tjp1 protein_coding protein_coding MGP_129S1SvImJ_T0084265.1 MGP_129S1SvImJ_G0032342.1 mouse_genomes_project 7 66465149 66469949 - Tjp1 protein_coding processed_transcript MGP_129S1SvImJ_T0084266.1 MGP_129S1SvImJ_G0032342.1 mouse_genomes_project 7 66513149 66515724 - Tjp1 protein_coding retained_intron MGP_129S1SvImJ_T0084267.1 MGP_129S1SvImJ_G0032342.1 mouse_genomes_project 7 66515543 66714764 - MGP_129S1SvImJ_P0084267 Tjp1 protein_coding protein_coding MGP_129S1SvImJ_T0084268.1 MGP_129S1SvImJ_G0032342.1 mouse_genomes_project 7 66700166 66714849 - Tjp1 protein_coding retained_intron MGP_129S1SvImJ_T0083816.1 MGP_129S1SvImJ_G0032227.1 mouse_genomes_project 7 45765991 45784785 - MGP_129S1SvImJ_P0083816 Nucb1 protein_coding protein_coding MGP_129S1SvImJ_T0083817.1 MGP_129S1SvImJ_G0032227.1 mouse_genomes_project 7 45767289 45777701 - MGP_129S1SvImJ_P0083817 Nucb1 protein_coding protein_coding MGP_129S1SvImJ_T0083818.1 MGP_129S1SvImJ_G0032227.1 mouse_genomes_project 7 45768170 45768607 - Nucb1 protein_coding processed_transcript MGP_129S1SvImJ_T0083819.1 MGP_129S1SvImJ_G0032227.1 mouse_genomes_project 7 45768544 45777695 - Nucb1 protein_coding processed_transcript MGP_129S1SvImJ_T0083820.1 MGP_129S1SvImJ_G0032227.1 mouse_genomes_project 7 45771282 45771954 - Nucb1 protein_coding retained_intron MGP_129S1SvImJ_T0083821.1 MGP_129S1SvImJ_G0032227.1 mouse_genomes_project 7 45771842 45784694 - MGP_129S1SvImJ_P0083821 Nucb1 protein_coding protein_coding MGP_129S1SvImJ_T0083822.1 MGP_129S1SvImJ_G0032227.1 mouse_genomes_project 7 45774708 45784710 - MGP_129S1SvImJ_P0083822 Nucb1 protein_coding protein_coding MGP_129S1SvImJ_T0083823.1 MGP_129S1SvImJ_G0032227.1 mouse_genomes_project 7 45777509 45784768 - Nucb1 protein_coding processed_transcript MGP_129S1SvImJ_T0083824.1 MGP_129S1SvImJ_G0032227.1 mouse_genomes_project 7 45781547 45784764 - Nucb1 protein_coding retained_intron MGP_129S1SvImJ_T0002288.1 MGP_129S1SvImJ_G0002199.1 mouse_genomes_project 7 77762703 77765347 + TEC TEC MGP_129S1SvImJ_T0081582.1 MGP_129S1SvImJ_G0031646.1 mouse_genomes_project 7 9868668 9886466 + MGP_129S1SvImJ_P0081582 Zfp606 protein_coding protein_coding MGP_129S1SvImJ_T0081583.1 MGP_129S1SvImJ_G0031646.1 mouse_genomes_project 7 9868680 9874132 + Zfp606 protein_coding retained_intron MGP_129S1SvImJ_T0081584.1 MGP_129S1SvImJ_G0031646.1 mouse_genomes_project 7 9868738 9885789 + MGP_129S1SvImJ_P0081584 Zfp606 protein_coding protein_coding MGP_129S1SvImJ_T0081585.1 MGP_129S1SvImJ_G0031646.1 mouse_genomes_project 7 9879743 9885780 + Zfp606 protein_coding retained_intron MGP_129S1SvImJ_T0085610.1 MGP_129S1SvImJ_G0032748.1 mouse_genomes_project 7 108612239 108613365 + MGP_129S1SvImJ_P0085610 Olfr692 protein_coding protein_coding MGP_129S1SvImJ_T0082424.1 MGP_129S1SvImJ_G0031892.1 mouse_genomes_project 7 25521953 25531303 - protein_coding retained_intron MGP_129S1SvImJ_T0082425.1 MGP_129S1SvImJ_G0031892.1 mouse_genomes_project 7 25522378 25531299 - MGP_129S1SvImJ_P0082425 protein_coding protein_coding MGP_129S1SvImJ_T0083385.1 MGP_129S1SvImJ_G0032104.1 mouse_genomes_project 7 39144744 39164712 + MGP_129S1SvImJ_P0083385 Zfp619 protein_coding protein_coding MGP_129S1SvImJ_T0085508.1 MGP_129S1SvImJ_G0032677.1 mouse_genomes_project 7 106942177 106943122 - MGP_129S1SvImJ_P0085508 Olfr629 protein_coding protein_coding MGP_129S1SvImJ_T0083735.1 MGP_129S1SvImJ_G0032205.1 mouse_genomes_project 7 45400776 45412849 + MGP_129S1SvImJ_P0083735 Slc17a7 protein_coding protein_coding MGP_129S1SvImJ_T0082437.1 MGP_129S1SvImJ_G0031898.1 mouse_genomes_project 7 25782286 25796473 - MGP_129S1SvImJ_P0082437 Rab4b protein_coding protein_coding MGP_129S1SvImJ_T0082438.1 MGP_129S1SvImJ_G0031898.1 mouse_genomes_project 7 25782288 25796387 - MGP_129S1SvImJ_P0082438 Rab4b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082439.1 MGP_129S1SvImJ_G0031898.1 mouse_genomes_project 7 25782289 25796392 - Rab4b protein_coding retained_intron MGP_129S1SvImJ_T0082441.1 MGP_129S1SvImJ_G0031898.1 mouse_genomes_project 7 25782557 25796465 - Rab4b protein_coding processed_transcript MGP_129S1SvImJ_T0082442.1 MGP_129S1SvImJ_G0031898.1 mouse_genomes_project 7 25786133 25788247 - Rab4b protein_coding retained_intron MGP_129S1SvImJ_T0082443.1 MGP_129S1SvImJ_G0031898.1 mouse_genomes_project 7 25786444 25788194 - Rab4b protein_coding processed_transcript MGP_129S1SvImJ_T0082444.1 MGP_129S1SvImJ_G0031898.1 mouse_genomes_project 7 25789531 25796453 - Rab4b protein_coding processed_transcript MGP_129S1SvImJ_T0082445.1 MGP_129S1SvImJ_G0031898.1 mouse_genomes_project 7 25789562 25796400 - Rab4b protein_coding processed_transcript MGP_129S1SvImJ_T0102698.1 MGP_129S1SvImJ_G0040531.1 mouse_genomes_project 7 11647462 11655172 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0008989.1 MGP_129S1SvImJ_G0007247.1 mouse_genomes_project 7 110589339 110640448 + Platr28 lincRNA lincRNA MGP_129S1SvImJ_T0018467.1 MGP_129S1SvImJ_G0015700.1 mouse_genomes_project 7 146652782 146658419 - Gm10575 processed_transcript processed_transcript MGP_129S1SvImJ_T0018468.1 MGP_129S1SvImJ_G0015700.1 mouse_genomes_project 7 146652784 146660682 - Gm10575 processed_transcript processed_transcript MGP_129S1SvImJ_T0018469.1 MGP_129S1SvImJ_G0015700.1 mouse_genomes_project 7 146653221 146655212 - Gm10575 processed_transcript processed_transcript MGP_129S1SvImJ_T0087471.1 MGP_129S1SvImJ_G0033206.1 mouse_genomes_project 7 146165979 146167060 - MGP_129S1SvImJ_P0087471 Ifitm6 protein_coding protein_coding MGP_129S1SvImJ_T0082122.1 MGP_129S1SvImJ_G0031818.1 mouse_genomes_project 7 22472423 22486647 - MGP_129S1SvImJ_P0082122 Zfp111 protein_coding protein_coding MGP_129S1SvImJ_T0082123.1 MGP_129S1SvImJ_G0031818.1 mouse_genomes_project 7 22475347 22482068 - MGP_129S1SvImJ_P0082123 Zfp111 protein_coding protein_coding MGP_129S1SvImJ_T0082124.1 MGP_129S1SvImJ_G0031818.1 mouse_genomes_project 7 22476555 22489847 - MGP_129S1SvImJ_P0082124 Zfp111 protein_coding protein_coding MGP_129S1SvImJ_T0082125.1 MGP_129S1SvImJ_G0031818.1 mouse_genomes_project 7 22478100 22486569 - Zfp111 protein_coding processed_transcript MGP_129S1SvImJ_T0082126.1 MGP_129S1SvImJ_G0031818.1 mouse_genomes_project 7 22482829 22486625 - Zfp111 protein_coding retained_intron MGP_129S1SvImJ_T0082127.1 MGP_129S1SvImJ_G0031818.1 mouse_genomes_project 7 22484235 22489847 - Zfp111 protein_coding processed_transcript MGP_129S1SvImJ_T0101316.1 MGP_129S1SvImJ_G0039383.1 mouse_genomes_project 7 60143716 60143795 - Gm24966 snoRNA snoRNA MGP_129S1SvImJ_T0085167.1 MGP_129S1SvImJ_G0032556.1 mouse_genomes_project 7 102596693 102597600 + MGP_129S1SvImJ_P0085167 Olfr520 protein_coding protein_coding MGP_129S1SvImJ_T0008970.1 MGP_129S1SvImJ_G0007233.1 mouse_genomes_project 7 92535280 92540731 - 2310010J17Rik lincRNA lincRNA MGP_129S1SvImJ_T0083701.1 MGP_129S1SvImJ_G0032189.1 mouse_genomes_project 7 45197325 45209742 - MGP_129S1SvImJ_P0083701 protein_coding protein_coding MGP_129S1SvImJ_T0081595.1 MGP_129S1SvImJ_G0031653.1 mouse_genomes_project 7 10227786 10243638 + MGP_129S1SvImJ_P0081595 Zfp110 protein_coding protein_coding MGP_129S1SvImJ_T0081596.1 MGP_129S1SvImJ_G0031653.1 mouse_genomes_project 7 10227841 10229128 + Zfp110 protein_coding processed_transcript MGP_129S1SvImJ_T0081597.1 MGP_129S1SvImJ_G0031653.1 mouse_genomes_project 7 10228062 10229720 + Zfp110 protein_coding retained_intron MGP_129S1SvImJ_T0081598.1 MGP_129S1SvImJ_G0031653.1 mouse_genomes_project 7 10228508 10242986 + MGP_129S1SvImJ_P0081598 Zfp110 protein_coding protein_coding MGP_129S1SvImJ_T0081599.1 MGP_129S1SvImJ_G0031653.1 mouse_genomes_project 7 10229324 10237966 + Zfp110 protein_coding processed_transcript MGP_129S1SvImJ_T0082836.1 MGP_129S1SvImJ_G0031998.1 mouse_genomes_project 7 29009727 29052015 - MGP_129S1SvImJ_P0082836 Gm26920 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087225.1 MGP_129S1SvImJ_G0033124.1 mouse_genomes_project 7 138466955 138479246 + MGP_129S1SvImJ_P0087225 Bccip protein_coding protein_coding MGP_129S1SvImJ_T0087226.1 MGP_129S1SvImJ_G0033124.1 mouse_genomes_project 7 138466970 138473547 + Bccip protein_coding retained_intron MGP_129S1SvImJ_T0087227.1 MGP_129S1SvImJ_G0033124.1 mouse_genomes_project 7 138467024 138472414 + Bccip protein_coding processed_transcript MGP_129S1SvImJ_T0087228.1 MGP_129S1SvImJ_G0033124.1 mouse_genomes_project 7 138472842 138479042 + Bccip protein_coding processed_transcript MGP_129S1SvImJ_T0087229.1 MGP_129S1SvImJ_G0033124.1 mouse_genomes_project 7 138475479 138477316 + Bccip protein_coding retained_intron MGP_129S1SvImJ_T0086862.1 MGP_129S1SvImJ_G0033052.1 mouse_genomes_project 7 132142661 132147997 + MGP_129S1SvImJ_P0086862 Orai3 protein_coding protein_coding MGP_129S1SvImJ_T0086863.1 MGP_129S1SvImJ_G0033052.1 mouse_genomes_project 7 132142661 132147997 + MGP_129S1SvImJ_P0086863 Orai3 protein_coding protein_coding MGP_129S1SvImJ_T0086864.1 MGP_129S1SvImJ_G0033052.1 mouse_genomes_project 7 132142661 132147539 + MGP_129S1SvImJ_P0086864 Orai3 protein_coding protein_coding MGP_129S1SvImJ_T0087602.1 MGP_129S1SvImJ_G0033230.1 mouse_genomes_project 7 146626756 146632636 - Pidd1 protein_coding retained_intron MGP_129S1SvImJ_T0087603.1 MGP_129S1SvImJ_G0033230.1 mouse_genomes_project 7 146626756 146632669 - MGP_129S1SvImJ_P0087603 Pidd1 protein_coding protein_coding MGP_129S1SvImJ_T0087604.1 MGP_129S1SvImJ_G0033230.1 mouse_genomes_project 7 146626756 146632000 - MGP_129S1SvImJ_P0087604 Pidd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087605.1 MGP_129S1SvImJ_G0033230.1 mouse_genomes_project 7 146626756 146631997 - MGP_129S1SvImJ_P0087605 Pidd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087606.1 MGP_129S1SvImJ_G0033230.1 mouse_genomes_project 7 146626760 146632652 - Pidd1 protein_coding retained_intron MGP_129S1SvImJ_T0087607.1 MGP_129S1SvImJ_G0033230.1 mouse_genomes_project 7 146626768 146632000 - Pidd1 protein_coding retained_intron MGP_129S1SvImJ_T0087608.1 MGP_129S1SvImJ_G0033230.1 mouse_genomes_project 7 146627158 146631999 - MGP_129S1SvImJ_P0087608 Pidd1 protein_coding protein_coding MGP_129S1SvImJ_T0087609.1 MGP_129S1SvImJ_G0033230.1 mouse_genomes_project 7 146627168 146631964 - MGP_129S1SvImJ_P0087609 Pidd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087610.1 MGP_129S1SvImJ_G0033230.1 mouse_genomes_project 7 146627173 146631964 - Pidd1 protein_coding retained_intron MGP_129S1SvImJ_T0087611.1 MGP_129S1SvImJ_G0033230.1 mouse_genomes_project 7 146628142 146628768 - Pidd1 protein_coding retained_intron MGP_129S1SvImJ_T0087612.1 MGP_129S1SvImJ_G0033230.1 mouse_genomes_project 7 146629693 146630933 - Pidd1 protein_coding retained_intron MGP_129S1SvImJ_T0087613.1 MGP_129S1SvImJ_G0033230.1 mouse_genomes_project 7 146630809 146632638 - Pidd1 protein_coding processed_transcript MGP_129S1SvImJ_T0008918.1 MGP_129S1SvImJ_G0007202.1 mouse_genomes_project 7 74625569 74628763 + Gm44725 lincRNA lincRNA MGP_129S1SvImJ_T0083740.1 MGP_129S1SvImJ_G0032209.1 mouse_genomes_project 7 45445297 45449656 - MGP_129S1SvImJ_P0083740 Dkkl1 protein_coding protein_coding MGP_129S1SvImJ_T0015707.1 MGP_129S1SvImJ_G0013796.1 mouse_genomes_project 7 1558309 1559020 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102725.1 MGP_129S1SvImJ_G0040557.1 mouse_genomes_project 7 32782431 32782801 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0018448.1 MGP_129S1SvImJ_G0015689.1 mouse_genomes_project 7 131066462 131075138 - Gm9967 processed_transcript antisense MGP_129S1SvImJ_T0018449.1 MGP_129S1SvImJ_G0015689.1 mouse_genomes_project 7 131072057 131075126 - Gm9967 processed_transcript antisense MGP_129S1SvImJ_T0018450.1 MGP_129S1SvImJ_G0015689.1 mouse_genomes_project 7 131073324 131075178 - Gm9967 processed_transcript retained_intron MGP_129S1SvImJ_T0083036.1 MGP_129S1SvImJ_G0032043.1 mouse_genomes_project 7 29743474 29768630 + protein_coding processed_transcript MGP_129S1SvImJ_T0083037.1 MGP_129S1SvImJ_G0032043.1 mouse_genomes_project 7 29764420 29768638 + MGP_129S1SvImJ_P0083037 protein_coding protein_coding MGP_129S1SvImJ_T0083038.1 MGP_129S1SvImJ_G0032043.1 mouse_genomes_project 7 29764476 29768637 + MGP_129S1SvImJ_P0083038 protein_coding protein_coding MGP_129S1SvImJ_T0083039.1 MGP_129S1SvImJ_G0032043.1 mouse_genomes_project 7 29764504 29768638 + MGP_129S1SvImJ_P0083039 protein_coding protein_coding MGP_129S1SvImJ_T0083040.1 MGP_129S1SvImJ_G0032043.1 mouse_genomes_project 7 29765244 29768630 + MGP_129S1SvImJ_P0083040 protein_coding protein_coding MGP_129S1SvImJ_T0084932.1 MGP_129S1SvImJ_G0032501.1 mouse_genomes_project 7 92355560 92382708 - MGP_129S1SvImJ_P0084932 Eed protein_coding protein_coding MGP_129S1SvImJ_T0084933.1 MGP_129S1SvImJ_G0032501.1 mouse_genomes_project 7 92378478 92382284 - Eed protein_coding processed_transcript MGP_129S1SvImJ_T0015917.1 MGP_129S1SvImJ_G0014006.1 mouse_genomes_project 7 130412749 130413160 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085401.1 MGP_129S1SvImJ_G0032602.1 mouse_genomes_project 7 105132594 105141981 + MGP_129S1SvImJ_P0085401 Art1 protein_coding protein_coding MGP_129S1SvImJ_T0085760.1 MGP_129S1SvImJ_G0032803.1 mouse_genomes_project 7 111298234 111299956 + MGP_129S1SvImJ_P0085760 Olfr473 protein_coding protein_coding MGP_129S1SvImJ_T0101344.1 MGP_129S1SvImJ_G0039411.1 mouse_genomes_project 7 113509660 113509844 + Snora23 snoRNA snoRNA MGP_129S1SvImJ_T0084273.1 MGP_129S1SvImJ_G0032344.1 mouse_genomes_project 7 66878040 66892231 + MGP_129S1SvImJ_P0084273 Tm2d3 protein_coding protein_coding MGP_129S1SvImJ_T0084274.1 MGP_129S1SvImJ_G0032344.1 mouse_genomes_project 7 66880279 66892222 + MGP_129S1SvImJ_P0084274 Tm2d3 protein_coding protein_coding MGP_129S1SvImJ_T0084275.1 MGP_129S1SvImJ_G0032344.1 mouse_genomes_project 7 66880288 66892233 + MGP_129S1SvImJ_P0084275 Tm2d3 protein_coding protein_coding MGP_129S1SvImJ_T0084276.1 MGP_129S1SvImJ_G0032344.1 mouse_genomes_project 7 66880318 66887092 + MGP_129S1SvImJ_P0084276 Tm2d3 protein_coding protein_coding MGP_129S1SvImJ_T0084277.1 MGP_129S1SvImJ_G0032344.1 mouse_genomes_project 7 66880338 66887239 + MGP_129S1SvImJ_P0084277 Tm2d3 protein_coding protein_coding MGP_129S1SvImJ_T0084278.1 MGP_129S1SvImJ_G0032344.1 mouse_genomes_project 7 66880347 66892220 + MGP_129S1SvImJ_P0084278 Tm2d3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084279.1 MGP_129S1SvImJ_G0032344.1 mouse_genomes_project 7 66880348 66892222 + MGP_129S1SvImJ_P0084279 Tm2d3 protein_coding protein_coding MGP_129S1SvImJ_T0084280.1 MGP_129S1SvImJ_G0032344.1 mouse_genomes_project 7 66880352 66882099 + MGP_129S1SvImJ_P0084280 Tm2d3 protein_coding protein_coding MGP_129S1SvImJ_T0084281.1 MGP_129S1SvImJ_G0032344.1 mouse_genomes_project 7 66880395 66889472 + MGP_129S1SvImJ_P0084281 Tm2d3 protein_coding protein_coding MGP_129S1SvImJ_T0084282.1 MGP_129S1SvImJ_G0032344.1 mouse_genomes_project 7 66880395 66887234 + MGP_129S1SvImJ_P0084282 Tm2d3 protein_coding protein_coding MGP_129S1SvImJ_T0005203.1 MGP_129S1SvImJ_G0004431.1 mouse_genomes_project 7 29513143 29520100 + Arhgap33os antisense antisense MGP_129S1SvImJ_T0081564.1 MGP_129S1SvImJ_G0031631.1 mouse_genomes_project 7 8349506 8354711 - MGP_129S1SvImJ_P0081564 protein_coding protein_coding MGP_129S1SvImJ_T0015879.1 MGP_129S1SvImJ_G0013968.1 mouse_genomes_project 7 100362415 100362893 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081562.1 MGP_129S1SvImJ_G0031629.1 mouse_genomes_project 7 8066487 8071715 - MGP_129S1SvImJ_P0081562 protein_coding protein_coding MGP_129S1SvImJ_T0101340.1 MGP_129S1SvImJ_G0039407.1 mouse_genomes_project 7 109740777 109740913 + Gm22372 snoRNA snoRNA MGP_129S1SvImJ_T0084387.1 MGP_129S1SvImJ_G0032366.1 mouse_genomes_project 7 72828197 72832539 - MGP_129S1SvImJ_P0084387 Gm10295 protein_coding protein_coding MGP_129S1SvImJ_T0085772.1 MGP_129S1SvImJ_G0032815.1 mouse_genomes_project 7 111688011 111688944 + MGP_129S1SvImJ_P0085772 Olfr491 protein_coding protein_coding MGP_129S1SvImJ_T0083777.1 MGP_129S1SvImJ_G0032216.1 mouse_genomes_project 7 45617461 45620154 - MGP_129S1SvImJ_P0083777 Lin7b protein_coding protein_coding MGP_129S1SvImJ_T0083778.1 MGP_129S1SvImJ_G0032216.1 mouse_genomes_project 7 45617463 45618173 - Lin7b protein_coding retained_intron MGP_129S1SvImJ_T0083779.1 MGP_129S1SvImJ_G0032216.1 mouse_genomes_project 7 45618780 45619886 - Lin7b protein_coding retained_intron MGP_129S1SvImJ_T0083780.1 MGP_129S1SvImJ_G0032216.1 mouse_genomes_project 7 45618834 45619756 - Lin7b protein_coding retained_intron MGP_129S1SvImJ_T0083781.1 MGP_129S1SvImJ_G0032216.1 mouse_genomes_project 7 45619133 45619917 - Lin7b protein_coding retained_intron MGP_129S1SvImJ_T0081386.1 MGP_129S1SvImJ_G0031554.1 mouse_genomes_project 7 1578008 1608070 - MGP_129S1SvImJ_P0081386 Hspbp1 protein_coding protein_coding MGP_129S1SvImJ_T0081387.1 MGP_129S1SvImJ_G0031554.1 mouse_genomes_project 7 1579621 1582083 - MGP_129S1SvImJ_P0081387 Hspbp1 protein_coding protein_coding MGP_129S1SvImJ_T0081388.1 MGP_129S1SvImJ_G0031554.1 mouse_genomes_project 7 1581653 1582248 - Hspbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0081389.1 MGP_129S1SvImJ_G0031554.1 mouse_genomes_project 7 1582060 1607996 - MGP_129S1SvImJ_P0081389 Hspbp1 protein_coding protein_coding MGP_129S1SvImJ_T0081390.1 MGP_129S1SvImJ_G0031554.1 mouse_genomes_project 7 1600118 1607663 - MGP_129S1SvImJ_P0081390 Hspbp1 protein_coding protein_coding MGP_129S1SvImJ_T0081391.1 MGP_129S1SvImJ_G0031554.1 mouse_genomes_project 7 1600118 1607983 - MGP_129S1SvImJ_P0081391 Hspbp1 protein_coding protein_coding MGP_129S1SvImJ_T0086759.1 MGP_129S1SvImJ_G0033032.1 mouse_genomes_project 7 131689994 131692623 - MGP_129S1SvImJ_P0086759 Zfp768 protein_coding protein_coding MGP_129S1SvImJ_T0086760.1 MGP_129S1SvImJ_G0033032.1 mouse_genomes_project 7 131689994 131692789 - MGP_129S1SvImJ_P0086760 Zfp768 protein_coding protein_coding MGP_129S1SvImJ_T0086263.1 MGP_129S1SvImJ_G0032947.1 mouse_genomes_project 7 126043884 126080336 - MGP_129S1SvImJ_P0086263 Gga2 protein_coding protein_coding MGP_129S1SvImJ_T0086264.1 MGP_129S1SvImJ_G0032947.1 mouse_genomes_project 7 126043884 126080281 - MGP_129S1SvImJ_P0086264 Gga2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086265.1 MGP_129S1SvImJ_G0032947.1 mouse_genomes_project 7 126045910 126059566 - Gga2 protein_coding retained_intron MGP_129S1SvImJ_T0086266.1 MGP_129S1SvImJ_G0032947.1 mouse_genomes_project 7 126053752 126056191 - Gga2 protein_coding retained_intron MGP_129S1SvImJ_T0086267.1 MGP_129S1SvImJ_G0032947.1 mouse_genomes_project 7 126061822 126080294 - Gga2 protein_coding retained_intron MGP_129S1SvImJ_T0086268.1 MGP_129S1SvImJ_G0032947.1 mouse_genomes_project 7 126067500 126080301 - Gga2 protein_coding retained_intron MGP_129S1SvImJ_T0083488.1 MGP_129S1SvImJ_G0032137.1 mouse_genomes_project 7 43720963 43728394 + MGP_129S1SvImJ_P0083488 Klk14 protein_coding protein_coding MGP_129S1SvImJ_T0082653.1 MGP_129S1SvImJ_G0031954.1 mouse_genomes_project 7 27513364 27522121 + MGP_129S1SvImJ_P0082653 Fbxo27 protein_coding protein_coding MGP_129S1SvImJ_T0082654.1 MGP_129S1SvImJ_G0031954.1 mouse_genomes_project 7 27513430 27521165 + MGP_129S1SvImJ_P0082654 Fbxo27 protein_coding protein_coding MGP_129S1SvImJ_T0082655.1 MGP_129S1SvImJ_G0031954.1 mouse_genomes_project 7 27513554 27514030 + MGP_129S1SvImJ_P0082655 Fbxo27 protein_coding protein_coding MGP_129S1SvImJ_T0082656.1 MGP_129S1SvImJ_G0031954.1 mouse_genomes_project 7 27519432 27520742 + Fbxo27 protein_coding processed_transcript MGP_129S1SvImJ_T0083762.1 MGP_129S1SvImJ_G0032212.1 mouse_genomes_project 7 45522502 45533984 + MGP_129S1SvImJ_P0083762 protein_coding protein_coding MGP_129S1SvImJ_T0083763.1 MGP_129S1SvImJ_G0032212.1 mouse_genomes_project 7 45527478 45530253 + protein_coding processed_transcript MGP_129S1SvImJ_T0083764.1 MGP_129S1SvImJ_G0032212.1 mouse_genomes_project 7 45527729 45531648 + protein_coding retained_intron MGP_129S1SvImJ_T0083765.1 MGP_129S1SvImJ_G0032212.1 mouse_genomes_project 7 45527765 45533571 + MGP_129S1SvImJ_P0083765 protein_coding protein_coding MGP_129S1SvImJ_T0083766.1 MGP_129S1SvImJ_G0032212.1 mouse_genomes_project 7 45527862 45533983 + MGP_129S1SvImJ_P0083766 protein_coding protein_coding MGP_129S1SvImJ_T0083767.1 MGP_129S1SvImJ_G0032212.1 mouse_genomes_project 7 45532125 45533988 + protein_coding retained_intron MGP_129S1SvImJ_T0083963.1 MGP_129S1SvImJ_G0032264.1 mouse_genomes_project 7 46768645 46805562 + MGP_129S1SvImJ_P0083963 Kcnc1 protein_coding protein_coding MGP_129S1SvImJ_T0083964.1 MGP_129S1SvImJ_G0032264.1 mouse_genomes_project 7 46769796 46810585 + MGP_129S1SvImJ_P0083964 Kcnc1 protein_coding protein_coding MGP_129S1SvImJ_T0083965.1 MGP_129S1SvImJ_G0032264.1 mouse_genomes_project 7 46794814 46799943 + Kcnc1 protein_coding processed_transcript MGP_129S1SvImJ_T0082168.1 MGP_129S1SvImJ_G0031829.1 mouse_genomes_project 7 22785338 22799869 + MGP_129S1SvImJ_P0082168 Plaur protein_coding protein_coding MGP_129S1SvImJ_T0082169.1 MGP_129S1SvImJ_G0031829.1 mouse_genomes_project 7 22785339 22788250 + Plaur protein_coding retained_intron MGP_129S1SvImJ_T0082170.1 MGP_129S1SvImJ_G0031829.1 mouse_genomes_project 7 22785349 22796868 + Plaur protein_coding retained_intron MGP_129S1SvImJ_T0082171.1 MGP_129S1SvImJ_G0031829.1 mouse_genomes_project 7 22785354 22799870 + Plaur protein_coding retained_intron MGP_129S1SvImJ_T0082172.1 MGP_129S1SvImJ_G0031829.1 mouse_genomes_project 7 22785354 22795901 + MGP_129S1SvImJ_P0082172 Plaur protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082173.1 MGP_129S1SvImJ_G0031829.1 mouse_genomes_project 7 22785354 22799617 + MGP_129S1SvImJ_P0082173 Plaur protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0002325.1 MGP_129S1SvImJ_G0002236.1 mouse_genomes_project 7 127088404 127089397 - TEC TEC MGP_129S1SvImJ_T0102779.1 MGP_129S1SvImJ_G0040611.1 mouse_genomes_project 7 87674541 87677240 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015721.1 MGP_129S1SvImJ_G0013810.1 mouse_genomes_project 7 10821178 10821968 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082477.1 MGP_129S1SvImJ_G0031906.1 mouse_genomes_project 7 25944309 25978052 - MGP_129S1SvImJ_P0082477 Ltbp4 protein_coding protein_coding MGP_129S1SvImJ_T0082478.1 MGP_129S1SvImJ_G0031906.1 mouse_genomes_project 7 25944313 25974040 - MGP_129S1SvImJ_P0082478 Ltbp4 protein_coding protein_coding MGP_129S1SvImJ_T0082479.1 MGP_129S1SvImJ_G0031906.1 mouse_genomes_project 7 25944315 25978052 - MGP_129S1SvImJ_P0082479 Ltbp4 protein_coding protein_coding MGP_129S1SvImJ_T0082480.1 MGP_129S1SvImJ_G0031906.1 mouse_genomes_project 7 25945171 25973990 - MGP_129S1SvImJ_P0082480 Ltbp4 protein_coding protein_coding MGP_129S1SvImJ_T0082481.1 MGP_129S1SvImJ_G0031906.1 mouse_genomes_project 7 25945252 25946144 - Ltbp4 protein_coding retained_intron MGP_129S1SvImJ_T0082482.1 MGP_129S1SvImJ_G0031906.1 mouse_genomes_project 7 25945796 25949684 - MGP_129S1SvImJ_P0082482 Ltbp4 protein_coding protein_coding MGP_129S1SvImJ_T0082483.1 MGP_129S1SvImJ_G0031906.1 mouse_genomes_project 7 25946733 25949703 - Ltbp4 protein_coding retained_intron MGP_129S1SvImJ_T0082484.1 MGP_129S1SvImJ_G0031906.1 mouse_genomes_project 7 25947935 25949487 - Ltbp4 protein_coding retained_intron MGP_129S1SvImJ_T0082485.1 MGP_129S1SvImJ_G0031906.1 mouse_genomes_project 7 25950584 25974025 - Ltbp4 protein_coding processed_transcript MGP_129S1SvImJ_T0082083.1 MGP_129S1SvImJ_G0031798.1 mouse_genomes_project 7 17911150 17917476 + MGP_129S1SvImJ_P0082083 Gm19345 protein_coding protein_coding MGP_129S1SvImJ_T0087687.1 MGP_129S1SvImJ_G0033245.1 mouse_genomes_project 7 147286088 147301853 - MGP_129S1SvImJ_P0087687 Dusp8 protein_coding protein_coding MGP_129S1SvImJ_T0087688.1 MGP_129S1SvImJ_G0033245.1 mouse_genomes_project 7 147290176 147302424 - MGP_129S1SvImJ_P0087688 Dusp8 protein_coding protein_coding MGP_129S1SvImJ_T0010880.1 MGP_129S1SvImJ_G0008996.1 mouse_genomes_project 7 30099183 30099243 - Mir7050 miRNA miRNA MGP_129S1SvImJ_T0085462.1 MGP_129S1SvImJ_G0032634.1 mouse_genomes_project 7 106021874 106022831 - MGP_129S1SvImJ_P0085462 Olfr575 protein_coding protein_coding MGP_129S1SvImJ_T0086529.1 MGP_129S1SvImJ_G0032992.1 mouse_genomes_project 7 130976839 130982948 - MGP_129S1SvImJ_P0086529 Slx1b protein_coding protein_coding MGP_129S1SvImJ_T0086530.1 MGP_129S1SvImJ_G0032992.1 mouse_genomes_project 7 130977838 130982803 - Slx1b protein_coding retained_intron MGP_129S1SvImJ_T0086531.1 MGP_129S1SvImJ_G0032992.1 mouse_genomes_project 7 130978278 130982909 - Slx1b protein_coding retained_intron MGP_129S1SvImJ_T0086532.1 MGP_129S1SvImJ_G0032992.1 mouse_genomes_project 7 130978278 130982888 - MGP_129S1SvImJ_P0086532 Slx1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0015770.1 MGP_129S1SvImJ_G0013859.1 mouse_genomes_project 7 32882571 32883039 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084788.1 MGP_129S1SvImJ_G0032440.1 mouse_genomes_project 7 83974693 84030470 - MGP_129S1SvImJ_P0084788 Hdgfrp3 protein_coding protein_coding MGP_129S1SvImJ_T0084789.1 MGP_129S1SvImJ_G0032440.1 mouse_genomes_project 7 83985426 84030456 - MGP_129S1SvImJ_P0084789 Hdgfrp3 protein_coding protein_coding MGP_129S1SvImJ_T0084790.1 MGP_129S1SvImJ_G0032440.1 mouse_genomes_project 7 83990764 84030021 - Hdgfrp3 protein_coding retained_intron MGP_129S1SvImJ_T0008840.1 MGP_129S1SvImJ_G0007143.1 mouse_genomes_project 7 33943176 33943894 - Gm44837 lincRNA lincRNA MGP_129S1SvImJ_T0085312.1 MGP_129S1SvImJ_G0032586.1 mouse_genomes_project 7 104669134 104728545 + Clpb protein_coding retained_intron MGP_129S1SvImJ_T0085313.1 MGP_129S1SvImJ_G0032586.1 mouse_genomes_project 7 104669134 104798524 + MGP_129S1SvImJ_P0085313 Clpb protein_coding protein_coding MGP_129S1SvImJ_T0085314.1 MGP_129S1SvImJ_G0032586.1 mouse_genomes_project 7 104669206 104796169 + MGP_129S1SvImJ_P0085314 Clpb protein_coding protein_coding MGP_129S1SvImJ_T0085315.1 MGP_129S1SvImJ_G0032586.1 mouse_genomes_project 7 104669258 104694631 + Clpb protein_coding retained_intron MGP_129S1SvImJ_T0085316.1 MGP_129S1SvImJ_G0032586.1 mouse_genomes_project 7 104669276 104712214 + MGP_129S1SvImJ_P0085316 Clpb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085317.1 MGP_129S1SvImJ_G0032586.1 mouse_genomes_project 7 104669277 104792530 + Clpb protein_coding retained_intron MGP_129S1SvImJ_T0085318.1 MGP_129S1SvImJ_G0032586.1 mouse_genomes_project 7 104687789 104769345 + MGP_129S1SvImJ_P0085318 Clpb protein_coding protein_coding MGP_129S1SvImJ_T0085319.1 MGP_129S1SvImJ_G0032586.1 mouse_genomes_project 7 104688877 104757089 + MGP_129S1SvImJ_P0085319 Clpb protein_coding protein_coding MGP_129S1SvImJ_T0085320.1 MGP_129S1SvImJ_G0032586.1 mouse_genomes_project 7 104769228 104775035 + Clpb protein_coding processed_transcript MGP_129S1SvImJ_T0085321.1 MGP_129S1SvImJ_G0032586.1 mouse_genomes_project 7 104769255 104791275 + Clpb protein_coding processed_transcript MGP_129S1SvImJ_T0002333.1 MGP_129S1SvImJ_G0002244.1 mouse_genomes_project 7 131804542 131805944 + TEC TEC MGP_129S1SvImJ_T0082038.1 MGP_129S1SvImJ_G0031788.1 mouse_genomes_project 7 17663975 17702859 - MGP_129S1SvImJ_P0082038 Clptm1 protein_coding protein_coding MGP_129S1SvImJ_T0083721.1 MGP_129S1SvImJ_G0032201.1 mouse_genomes_project 7 45360924 45364023 - MGP_129S1SvImJ_P0083721 protein_coding protein_coding MGP_129S1SvImJ_T0015920.1 MGP_129S1SvImJ_G0014009.1 mouse_genomes_project 7 131038600 131038829 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008925.1 MGP_129S1SvImJ_G0007208.1 mouse_genomes_project 7 74853045 74857851 + 4930429H19Rik lincRNA lincRNA MGP_129S1SvImJ_T0008926.1 MGP_129S1SvImJ_G0007208.1 mouse_genomes_project 7 74853195 74854620 + 4930429H19Rik lincRNA lincRNA MGP_129S1SvImJ_T0085892.1 MGP_129S1SvImJ_G0032861.1 mouse_genomes_project 7 114356258 114370023 - MGP_129S1SvImJ_P0085892 Lyve1 protein_coding protein_coding MGP_129S1SvImJ_T0087639.1 MGP_129S1SvImJ_G0033235.1 mouse_genomes_project 7 146664768 146668129 - MGP_129S1SvImJ_P0087639 Polr2l protein_coding protein_coding MGP_129S1SvImJ_T0084875.1 MGP_129S1SvImJ_G0032478.1 mouse_genomes_project 7 88734501 88735494 + MGP_129S1SvImJ_P0084875 Olfr299 protein_coding protein_coding MGP_129S1SvImJ_T0002224.1 MGP_129S1SvImJ_G0002136.1 mouse_genomes_project 7 23005019 23005257 + TEC TEC MGP_129S1SvImJ_T0086399.1 MGP_129S1SvImJ_G0032972.1 mouse_genomes_project 7 130104370 130312981 - MGP_129S1SvImJ_P0086399 Gsg1l protein_coding protein_coding MGP_129S1SvImJ_T0101348.1 MGP_129S1SvImJ_G0039415.1 mouse_genomes_project 7 120070852 120070939 - Snord14a snoRNA snoRNA MGP_129S1SvImJ_T0002227.1 MGP_129S1SvImJ_G0002139.1 mouse_genomes_project 7 33636844 33639471 - TEC TEC MGP_129S1SvImJ_T0087405.1 MGP_129S1SvImJ_G0033180.1 mouse_genomes_project 7 145582356 145583347 + MGP_129S1SvImJ_P0087405 Olfr535 protein_coding protein_coding MGP_129S1SvImJ_T0102704.1 MGP_129S1SvImJ_G0040537.1 mouse_genomes_project 7 12089642 12090162 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0084038.1 MGP_129S1SvImJ_G0032290.1 mouse_genomes_project 7 49072937 49085196 - MGP_129S1SvImJ_P0084038 Mrgprb1 protein_coding protein_coding MGP_129S1SvImJ_T0084039.1 MGP_129S1SvImJ_G0032290.1 mouse_genomes_project 7 49075724 49085149 - MGP_129S1SvImJ_P0084039 Mrgprb1 protein_coding protein_coding MGP_129S1SvImJ_T0084040.1 MGP_129S1SvImJ_G0032290.1 mouse_genomes_project 7 49075954 49085100 - MGP_129S1SvImJ_P0084040 Mrgprb1 protein_coding protein_coding MGP_129S1SvImJ_T0005186.1 MGP_129S1SvImJ_G0004419.1 mouse_genomes_project 7 22967400 22974170 - Gm26550 antisense antisense MGP_129S1SvImJ_T0100100.1 MGP_129S1SvImJ_G0038167.1 mouse_genomes_project 7 146355418 146355514 - Gm22019 snRNA snRNA MGP_129S1SvImJ_T0086763.1 MGP_129S1SvImJ_G0033035.1 mouse_genomes_project 7 131736682 131740629 - MGP_129S1SvImJ_P0086763 E430018J23Rik protein_coding protein_coding MGP_129S1SvImJ_T0081874.1 MGP_129S1SvImJ_G0031740.1 mouse_genomes_project 7 16394109 16406670 - MGP_129S1SvImJ_P0081874 Psg25 protein_coding protein_coding MGP_129S1SvImJ_T0082102.1 MGP_129S1SvImJ_G0031812.1 mouse_genomes_project 7 22136469 22137384 + MGP_129S1SvImJ_P0082102 Vmn1r178 protein_coding protein_coding MGP_129S1SvImJ_T0084194.1 MGP_129S1SvImJ_G0032325.1 mouse_genomes_project 7 60794045 60803209 - MGP_129S1SvImJ_P0084194 Gm38393 protein_coding protein_coding MGP_129S1SvImJ_T0083908.1 MGP_129S1SvImJ_G0032248.1 mouse_genomes_project 7 46127816 46135295 - MGP_129S1SvImJ_P0083908 Cyth2 protein_coding protein_coding MGP_129S1SvImJ_T0083909.1 MGP_129S1SvImJ_G0032248.1 mouse_genomes_project 7 46128823 46135481 - MGP_129S1SvImJ_P0083909 Cyth2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083910.1 MGP_129S1SvImJ_G0032248.1 mouse_genomes_project 7 46128833 46135461 - MGP_129S1SvImJ_P0083910 Cyth2 protein_coding protein_coding MGP_129S1SvImJ_T0083911.1 MGP_129S1SvImJ_G0032248.1 mouse_genomes_project 7 46131232 46135451 - Cyth2 protein_coding processed_transcript MGP_129S1SvImJ_T0083912.1 MGP_129S1SvImJ_G0032248.1 mouse_genomes_project 7 46132033 46135760 - MGP_129S1SvImJ_P0083912 Cyth2 protein_coding protein_coding MGP_129S1SvImJ_T0083913.1 MGP_129S1SvImJ_G0032248.1 mouse_genomes_project 7 46132702 46135440 - Cyth2 protein_coding processed_transcript MGP_129S1SvImJ_T0002287.1 MGP_129S1SvImJ_G0002198.1 mouse_genomes_project 7 77707900 77711101 + TEC TEC MGP_129S1SvImJ_T0015722.1 MGP_129S1SvImJ_G0013811.1 mouse_genomes_project 7 10860331 10860653 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102783.1 MGP_129S1SvImJ_G0040615.1 mouse_genomes_project 7 87894389 87895302 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102822.1 MGP_129S1SvImJ_G0040654.1 mouse_genomes_project 7 109094884 109862159 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085733.1 MGP_129S1SvImJ_G0032783.1 mouse_genomes_project 7 110311793 110316039 - MGP_129S1SvImJ_P0085733 Olfr710 protein_coding protein_coding MGP_129S1SvImJ_T0102708.1 MGP_129S1SvImJ_G0040541.1 mouse_genomes_project 7 12315545 12315840 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002236.1 MGP_129S1SvImJ_G0002148.1 mouse_genomes_project 7 36860524 36861726 - TEC TEC MGP_129S1SvImJ_T0015893.1 MGP_129S1SvImJ_G0013982.1 mouse_genomes_project 7 107190366 107193810 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015905.1 MGP_129S1SvImJ_G0013994.1 mouse_genomes_project 7 120239145 120239433 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005223.1 MGP_129S1SvImJ_G0004447.1 mouse_genomes_project 7 37187514 37190062 + 4930505M18Rik antisense antisense MGP_129S1SvImJ_T0081600.1 MGP_129S1SvImJ_G0031654.1 mouse_genomes_project 7 10275836 10288816 + Zfp128 protein_coding retained_intron MGP_129S1SvImJ_T0081601.1 MGP_129S1SvImJ_G0031654.1 mouse_genomes_project 7 10275836 10290373 + MGP_129S1SvImJ_P0081601 Zfp128 protein_coding protein_coding MGP_129S1SvImJ_T0083950.1 MGP_129S1SvImJ_G0032259.1 mouse_genomes_project 7 46448113 46449286 - MGP_129S1SvImJ_P0083950 Kcnj11 protein_coding protein_coding MGP_129S1SvImJ_T0087091.1 MGP_129S1SvImJ_G0033092.1 mouse_genomes_project 7 135055209 135071444 - MGP_129S1SvImJ_P0087091 Nsmce4a protein_coding protein_coding MGP_129S1SvImJ_T0087092.1 MGP_129S1SvImJ_G0033092.1 mouse_genomes_project 7 135055219 135058644 - Nsmce4a protein_coding retained_intron MGP_129S1SvImJ_T0087093.1 MGP_129S1SvImJ_G0033092.1 mouse_genomes_project 7 135056458 135097149 - MGP_129S1SvImJ_P0087093 Nsmce4a protein_coding protein_coding MGP_129S1SvImJ_T0087094.1 MGP_129S1SvImJ_G0033092.1 mouse_genomes_project 7 135058219 135062178 - Nsmce4a protein_coding retained_intron MGP_129S1SvImJ_T0087095.1 MGP_129S1SvImJ_G0033092.1 mouse_genomes_project 7 135059653 135070017 - MGP_129S1SvImJ_P0087095 Nsmce4a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087096.1 MGP_129S1SvImJ_G0033092.1 mouse_genomes_project 7 135062378 135066849 - Nsmce4a protein_coding retained_intron MGP_129S1SvImJ_T0010867.1 MGP_129S1SvImJ_G0008983.1 mouse_genomes_project 7 23670064 23670122 - Mir7048 miRNA miRNA MGP_129S1SvImJ_T0086170.1 MGP_129S1SvImJ_G0032919.1 mouse_genomes_project 7 123728303 123784203 + MGP_129S1SvImJ_P0086170 2610020H08Rik protein_coding protein_coding MGP_129S1SvImJ_T0086171.1 MGP_129S1SvImJ_G0032919.1 mouse_genomes_project 7 123728307 123784203 + MGP_129S1SvImJ_P0086171 2610020H08Rik protein_coding protein_coding MGP_129S1SvImJ_T0086172.1 MGP_129S1SvImJ_G0032919.1 mouse_genomes_project 7 123728448 123754091 + 2610020H08Rik protein_coding retained_intron MGP_129S1SvImJ_T0086173.1 MGP_129S1SvImJ_G0032919.1 mouse_genomes_project 7 123728677 123784073 + MGP_129S1SvImJ_P0086173 2610020H08Rik protein_coding protein_coding MGP_129S1SvImJ_T0086174.1 MGP_129S1SvImJ_G0032919.1 mouse_genomes_project 7 123757334 123766015 + 2610020H08Rik protein_coding processed_transcript MGP_129S1SvImJ_T0086175.1 MGP_129S1SvImJ_G0032919.1 mouse_genomes_project 7 123758785 123761245 + 2610020H08Rik protein_coding retained_intron MGP_129S1SvImJ_T0086176.1 MGP_129S1SvImJ_G0032919.1 mouse_genomes_project 7 123767473 123779299 + 2610020H08Rik protein_coding processed_transcript MGP_129S1SvImJ_T0086177.1 MGP_129S1SvImJ_G0032919.1 mouse_genomes_project 7 123779465 123780696 + 2610020H08Rik protein_coding retained_intron MGP_129S1SvImJ_T0083258.1 MGP_129S1SvImJ_G0032081.1 mouse_genomes_project 7 34395201 34405356 - MGP_129S1SvImJ_P0083258 Cebpg protein_coding protein_coding MGP_129S1SvImJ_T0083259.1 MGP_129S1SvImJ_G0032081.1 mouse_genomes_project 7 34398675 34400285 - Cebpg protein_coding retained_intron MGP_129S1SvImJ_T0083260.1 MGP_129S1SvImJ_G0032081.1 mouse_genomes_project 7 34399094 34404723 - MGP_129S1SvImJ_P0083260 Cebpg protein_coding protein_coding MGP_129S1SvImJ_T0083261.1 MGP_129S1SvImJ_G0032081.1 mouse_genomes_project 7 34399644 34404766 - Cebpg protein_coding processed_transcript MGP_129S1SvImJ_T0087928.1 MGP_129S1SvImJ_G0033298.1 mouse_genomes_project 7 150729862 150740425 + MGP_129S1SvImJ_P0087928 Mrgprd protein_coding protein_coding MGP_129S1SvImJ_T0086736.1 MGP_129S1SvImJ_G0033026.1 mouse_genomes_project 7 131548724 131549419 - Sept1 protein_coding retained_intron MGP_129S1SvImJ_T0086737.1 MGP_129S1SvImJ_G0033026.1 mouse_genomes_project 7 131549051 131553995 - MGP_129S1SvImJ_P0086737 Sept1 protein_coding protein_coding MGP_129S1SvImJ_T0086738.1 MGP_129S1SvImJ_G0033026.1 mouse_genomes_project 7 131549064 131554057 - MGP_129S1SvImJ_P0086738 Sept1 protein_coding protein_coding MGP_129S1SvImJ_T0086739.1 MGP_129S1SvImJ_G0033026.1 mouse_genomes_project 7 131549259 131552625 - Sept1 protein_coding retained_intron MGP_129S1SvImJ_T0086740.1 MGP_129S1SvImJ_G0033026.1 mouse_genomes_project 7 131550178 131553976 - MGP_129S1SvImJ_P0086740 Sept1 protein_coding protein_coding MGP_129S1SvImJ_T0086741.1 MGP_129S1SvImJ_G0033026.1 mouse_genomes_project 7 131552313 131568170 - MGP_129S1SvImJ_P0086741 Sept1 protein_coding protein_coding MGP_129S1SvImJ_T0086742.1 MGP_129S1SvImJ_G0033026.1 mouse_genomes_project 7 131552350 131554012 - Sept1 protein_coding retained_intron MGP_129S1SvImJ_T0086743.1 MGP_129S1SvImJ_G0033026.1 mouse_genomes_project 7 131552557 131553817 - Sept1 protein_coding processed_transcript MGP_129S1SvImJ_T0086744.1 MGP_129S1SvImJ_G0033026.1 mouse_genomes_project 7 131567941 131568654 - Sept1 protein_coding retained_intron MGP_129S1SvImJ_T0081591.1 MGP_129S1SvImJ_G0031652.1 mouse_genomes_project 7 10188473 10209601 - MGP_129S1SvImJ_P0081591 Zfp329 protein_coding protein_coding MGP_129S1SvImJ_T0081592.1 MGP_129S1SvImJ_G0031652.1 mouse_genomes_project 7 10188478 10209605 - MGP_129S1SvImJ_P0081592 Zfp329 protein_coding protein_coding MGP_129S1SvImJ_T0081593.1 MGP_129S1SvImJ_G0031652.1 mouse_genomes_project 7 10189573 10191570 - Zfp329 protein_coding processed_transcript MGP_129S1SvImJ_T0081594.1 MGP_129S1SvImJ_G0031652.1 mouse_genomes_project 7 10189596 10209599 - MGP_129S1SvImJ_P0081594 Zfp329 protein_coding protein_coding MGP_129S1SvImJ_T0102804.1 MGP_129S1SvImJ_G0040636.1 mouse_genomes_project 7 106326246 106327173 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015832.1 MGP_129S1SvImJ_G0013921.1 mouse_genomes_project 7 66343250 66344506 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081533.1 MGP_129S1SvImJ_G0031612.1 mouse_genomes_project 7 3665542 3666469 + MGP_129S1SvImJ_P0081533 Olfr1350 protein_coding protein_coding MGP_129S1SvImJ_T0005187.1 MGP_129S1SvImJ_G0004420.1 mouse_genomes_project 7 23671760 23673323 + 4933430L12Rik antisense antisense MGP_129S1SvImJ_T0102784.1 MGP_129S1SvImJ_G0040616.1 mouse_genomes_project 7 87993567 87994286 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0083891.1 MGP_129S1SvImJ_G0032244.1 mouse_genomes_project 7 46031925 46040201 + MGP_129S1SvImJ_P0083891 Fam83e protein_coding protein_coding MGP_129S1SvImJ_T0083892.1 MGP_129S1SvImJ_G0032244.1 mouse_genomes_project 7 46031933 46035587 + Fam83e protein_coding retained_intron MGP_129S1SvImJ_T0083894.1 MGP_129S1SvImJ_G0032244.1 mouse_genomes_project 7 46036584 46040198 + Fam83e protein_coding processed_transcript MGP_129S1SvImJ_T0085505.1 MGP_129S1SvImJ_G0032674.1 mouse_genomes_project 7 106824810 106825764 - MGP_129S1SvImJ_P0085505 Olfr623 protein_coding protein_coding MGP_129S1SvImJ_T0084175.1 MGP_129S1SvImJ_G0032322.1 mouse_genomes_project 7 60025817 60046753 + MGP_129S1SvImJ_P0084175 Ube3a protein_coding protein_coding MGP_129S1SvImJ_T0084176.1 MGP_129S1SvImJ_G0032322.1 mouse_genomes_project 7 60025817 60073174 + MGP_129S1SvImJ_P0084176 Ube3a protein_coding protein_coding MGP_129S1SvImJ_T0084177.1 MGP_129S1SvImJ_G0032322.1 mouse_genomes_project 7 60025837 60089428 + Ube3a protein_coding retained_intron MGP_129S1SvImJ_T0084178.1 MGP_129S1SvImJ_G0032322.1 mouse_genomes_project 7 60026192 60077167 + Ube3a protein_coding processed_transcript MGP_129S1SvImJ_T0084179.1 MGP_129S1SvImJ_G0032322.1 mouse_genomes_project 7 60026240 60047096 + Ube3a protein_coding processed_transcript MGP_129S1SvImJ_T0084180.1 MGP_129S1SvImJ_G0032322.1 mouse_genomes_project 7 60026298 60077430 + MGP_129S1SvImJ_P0084180 Ube3a protein_coding protein_coding MGP_129S1SvImJ_T0084181.1 MGP_129S1SvImJ_G0032322.1 mouse_genomes_project 7 60026570 60102561 + MGP_129S1SvImJ_P0084181 Ube3a protein_coding protein_coding MGP_129S1SvImJ_T0084182.1 MGP_129S1SvImJ_G0032322.1 mouse_genomes_project 7 60042462 60073084 + MGP_129S1SvImJ_P0084182 Ube3a protein_coding protein_coding MGP_129S1SvImJ_T0084183.1 MGP_129S1SvImJ_G0032322.1 mouse_genomes_project 7 60078013 60083162 + Ube3a protein_coding retained_intron MGP_129S1SvImJ_T0084184.1 MGP_129S1SvImJ_G0032322.1 mouse_genomes_project 7 60084388 60087736 + Ube3a protein_coding retained_intron MGP_129S1SvImJ_T0084185.1 MGP_129S1SvImJ_G0032322.1 mouse_genomes_project 7 60088151 60102563 + MGP_129S1SvImJ_P0084185 Ube3a protein_coding protein_coding MGP_129S1SvImJ_T0084186.1 MGP_129S1SvImJ_G0032322.1 mouse_genomes_project 7 60088907 60102573 + MGP_129S1SvImJ_P0084186 Ube3a protein_coding protein_coding MGP_129S1SvImJ_T0084187.1 MGP_129S1SvImJ_G0032322.1 mouse_genomes_project 7 60101141 60102575 + Ube3a protein_coding retained_intron MGP_129S1SvImJ_T0086215.1 MGP_129S1SvImJ_G0032932.1 mouse_genomes_project 7 124661179 124724345 + MGP_129S1SvImJ_P0086215 BC030336 protein_coding protein_coding MGP_129S1SvImJ_T0085727.1 MGP_129S1SvImJ_G0032777.1 mouse_genomes_project 7 110197621 110198581 + MGP_129S1SvImJ_P0085727 Olfr703 protein_coding protein_coding MGP_129S1SvImJ_T0083184.1 MGP_129S1SvImJ_G0032066.1 mouse_genomes_project 7 32926286 32928762 - MGP_129S1SvImJ_P0083184 Scgb2b24 protein_coding protein_coding MGP_129S1SvImJ_T0015705.1 MGP_129S1SvImJ_G0013794.1 mouse_genomes_project 7 1529047 1529648 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101766.1 MGP_129S1SvImJ_G0039748.1 mouse_genomes_project 7 69948683 69950237 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101767.1 MGP_129S1SvImJ_G0039748.1 mouse_genomes_project 7 69949065 69949785 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0082667.1 MGP_129S1SvImJ_G0031958.1 mouse_genomes_project 7 27591255 27595789 + MGP_129S1SvImJ_P0082667 Ccer2 protein_coding protein_coding MGP_129S1SvImJ_T0087854.1 MGP_129S1SvImJ_G0033280.1 mouse_genomes_project 7 149015549 149021349 - Osbpl5 protein_coding retained_intron MGP_129S1SvImJ_T0087855.1 MGP_129S1SvImJ_G0033280.1 mouse_genomes_project 7 149015549 149067003 - MGP_129S1SvImJ_P0087855 Osbpl5 protein_coding protein_coding MGP_129S1SvImJ_T0087856.1 MGP_129S1SvImJ_G0033280.1 mouse_genomes_project 7 149015549 149068625 - MGP_129S1SvImJ_P0087856 Osbpl5 protein_coding protein_coding MGP_129S1SvImJ_T0087857.1 MGP_129S1SvImJ_G0033280.1 mouse_genomes_project 7 149021051 149021875 - Osbpl5 protein_coding retained_intron MGP_129S1SvImJ_T0087858.1 MGP_129S1SvImJ_G0033280.1 mouse_genomes_project 7 149029731 149031797 - Osbpl5 protein_coding retained_intron MGP_129S1SvImJ_T0087859.1 MGP_129S1SvImJ_G0033280.1 mouse_genomes_project 7 149035728 149084460 - MGP_129S1SvImJ_P0087859 Osbpl5 protein_coding protein_coding MGP_129S1SvImJ_T0087860.1 MGP_129S1SvImJ_G0033280.1 mouse_genomes_project 7 149040173 149066961 - Osbpl5 protein_coding processed_transcript MGP_129S1SvImJ_T0102739.1 MGP_129S1SvImJ_G0040571.1 mouse_genomes_project 7 41876861 41882795 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0083422.1 MGP_129S1SvImJ_G0032117.1 mouse_genomes_project 7 43301066 43318125 - MGP_129S1SvImJ_P0083422 Zfp715 protein_coding protein_coding MGP_129S1SvImJ_T0083423.1 MGP_129S1SvImJ_G0032117.1 mouse_genomes_project 7 43301392 43318141 - MGP_129S1SvImJ_P0083423 Zfp715 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083424.1 MGP_129S1SvImJ_G0032117.1 mouse_genomes_project 7 43301392 43318133 - MGP_129S1SvImJ_P0083424 Zfp715 protein_coding protein_coding MGP_129S1SvImJ_T0083425.1 MGP_129S1SvImJ_G0032117.1 mouse_genomes_project 7 43301392 43316364 - MGP_129S1SvImJ_P0083425 Zfp715 protein_coding protein_coding MGP_129S1SvImJ_T0083426.1 MGP_129S1SvImJ_G0032117.1 mouse_genomes_project 7 43304821 43317973 - MGP_129S1SvImJ_P0083426 Zfp715 protein_coding protein_coding MGP_129S1SvImJ_T0083427.1 MGP_129S1SvImJ_G0032117.1 mouse_genomes_project 7 43306345 43318172 - Zfp715 protein_coding retained_intron MGP_129S1SvImJ_T0083428.1 MGP_129S1SvImJ_G0032117.1 mouse_genomes_project 7 43306479 43317941 - MGP_129S1SvImJ_P0083428 Zfp715 protein_coding protein_coding MGP_129S1SvImJ_T0083718.1 MGP_129S1SvImJ_G0032198.1 mouse_genomes_project 7 45311903 45323946 - MGP_129S1SvImJ_P0083718 Rcn3 protein_coding protein_coding MGP_129S1SvImJ_T0002249.1 MGP_129S1SvImJ_G0002161.1 mouse_genomes_project 7 46718350 46718866 + TEC TEC MGP_129S1SvImJ_T0002232.1 MGP_129S1SvImJ_G0002144.1 mouse_genomes_project 7 36184822 36185981 + TEC TEC MGP_129S1SvImJ_T0011721.1 MGP_129S1SvImJ_G0009837.1 mouse_genomes_project 7 148534887 148535347 + Gm27395 misc_RNA misc_RNA MGP_129S1SvImJ_T0087484.1 MGP_129S1SvImJ_G0033210.1 mouse_genomes_project 7 146260887 146270254 - MGP_129S1SvImJ_P0087484 Sigirr protein_coding protein_coding MGP_129S1SvImJ_T0085251.1 MGP_129S1SvImJ_G0032576.1 mouse_genomes_project 7 103683313 103756461 + MGP_129S1SvImJ_P0085251 Fam168a protein_coding protein_coding MGP_129S1SvImJ_T0085252.1 MGP_129S1SvImJ_G0032576.1 mouse_genomes_project 7 103694107 103755347 + MGP_129S1SvImJ_P0085252 Fam168a protein_coding protein_coding MGP_129S1SvImJ_T0010898.1 MGP_129S1SvImJ_G0009014.1 mouse_genomes_project 7 62716237 62716317 - Gm23962 miRNA miRNA MGP_129S1SvImJ_T0083014.1 MGP_129S1SvImJ_G0032035.1 mouse_genomes_project 7 29646156 29648401 - MGP_129S1SvImJ_P0083014 Etv2 protein_coding protein_coding MGP_129S1SvImJ_T0015922.1 MGP_129S1SvImJ_G0014011.1 mouse_genomes_project 7 131105066 131105370 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082092.1 MGP_129S1SvImJ_G0031804.1 mouse_genomes_project 7 18034052 18064158 + MGP_129S1SvImJ_P0082092 Ceacam20 protein_coding protein_coding MGP_129S1SvImJ_T0081589.1 MGP_129S1SvImJ_G0031650.1 mouse_genomes_project 7 10109514 10123790 - MGP_129S1SvImJ_P0081589 protein_coding protein_coding MGP_129S1SvImJ_T0087134.1 MGP_129S1SvImJ_G0033104.1 mouse_genomes_project 7 136015239 136036757 - MGP_129S1SvImJ_P0087134 Ikzf5 protein_coding protein_coding MGP_129S1SvImJ_T0087135.1 MGP_129S1SvImJ_G0033104.1 mouse_genomes_project 7 136016955 136036733 - MGP_129S1SvImJ_P0087135 Ikzf5 protein_coding protein_coding MGP_129S1SvImJ_T0087136.1 MGP_129S1SvImJ_G0033104.1 mouse_genomes_project 7 136019111 136036614 - MGP_129S1SvImJ_P0087136 Ikzf5 protein_coding protein_coding MGP_129S1SvImJ_T0087137.1 MGP_129S1SvImJ_G0033104.1 mouse_genomes_project 7 136019980 136036731 - MGP_129S1SvImJ_P0087137 Ikzf5 protein_coding protein_coding MGP_129S1SvImJ_T0087138.1 MGP_129S1SvImJ_G0033104.1 mouse_genomes_project 7 136023329 136035316 - MGP_129S1SvImJ_P0087138 Ikzf5 protein_coding protein_coding MGP_129S1SvImJ_T0005312.1 MGP_129S1SvImJ_G0004507.1 mouse_genomes_project 7 131862979 131865411 - 1700008J07Rik antisense antisense MGP_129S1SvImJ_T0100055.1 MGP_129S1SvImJ_G0038122.1 mouse_genomes_project 7 46823035 46823142 + Gm22969 snRNA snRNA MGP_129S1SvImJ_T0005195.1 MGP_129S1SvImJ_G0004424.1 mouse_genomes_project 7 25877062 25885732 - Gm15567 antisense antisense MGP_129S1SvImJ_T0081864.1 MGP_129S1SvImJ_G0031733.1 mouse_genomes_project 7 15646701 15649770 + MGP_129S1SvImJ_P0081864 Ceacam14 protein_coding protein_coding MGP_129S1SvImJ_T0002305.1 MGP_129S1SvImJ_G0002216.1 mouse_genomes_project 7 82053338 82055179 - TEC TEC MGP_129S1SvImJ_T0087836.1 MGP_129S1SvImJ_G0033274.1 mouse_genomes_project 7 148800508 148801505 - MGP_129S1SvImJ_P0087836 Phlda2 protein_coding protein_coding MGP_129S1SvImJ_T0084696.1 MGP_129S1SvImJ_G0032418.1 mouse_genomes_project 7 82700959 82799953 - MGP_129S1SvImJ_P0084696 Iqgap1 protein_coding protein_coding MGP_129S1SvImJ_T0084697.1 MGP_129S1SvImJ_G0032418.1 mouse_genomes_project 7 82716658 82720010 - MGP_129S1SvImJ_P0084697 Iqgap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084698.1 MGP_129S1SvImJ_G0032418.1 mouse_genomes_project 7 82732911 82735688 - Iqgap1 protein_coding retained_intron MGP_129S1SvImJ_T0084699.1 MGP_129S1SvImJ_G0032418.1 mouse_genomes_project 7 82742530 82799800 - Iqgap1 protein_coding retained_intron MGP_129S1SvImJ_T0084700.1 MGP_129S1SvImJ_G0032418.1 mouse_genomes_project 7 82748243 82799818 - Iqgap1 protein_coding retained_intron MGP_129S1SvImJ_T0084701.1 MGP_129S1SvImJ_G0032418.1 mouse_genomes_project 7 82756843 82818362 - MGP_129S1SvImJ_P0084701 Iqgap1 protein_coding protein_coding MGP_129S1SvImJ_T0084702.1 MGP_129S1SvImJ_G0032418.1 mouse_genomes_project 7 82762663 82828469 - MGP_129S1SvImJ_P0084702 Iqgap1 protein_coding protein_coding MGP_129S1SvImJ_T0084703.1 MGP_129S1SvImJ_G0032418.1 mouse_genomes_project 7 82792901 82799809 - Iqgap1 protein_coding retained_intron MGP_129S1SvImJ_T0015823.1 MGP_129S1SvImJ_G0013912.1 mouse_genomes_project 7 57640473 57640734 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015783.1 MGP_129S1SvImJ_G0013872.1 mouse_genomes_project 7 39208090 39208684 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081984.1 MGP_129S1SvImJ_G0031773.1 mouse_genomes_project 7 17356452 17358020 + Ppp1r13l protein_coding processed_transcript MGP_129S1SvImJ_T0081985.1 MGP_129S1SvImJ_G0031773.1 mouse_genomes_project 7 17356473 17366711 + MGP_129S1SvImJ_P0081985 Ppp1r13l protein_coding protein_coding MGP_129S1SvImJ_T0081986.1 MGP_129S1SvImJ_G0031773.1 mouse_genomes_project 7 17357349 17366707 + MGP_129S1SvImJ_P0081986 Ppp1r13l protein_coding protein_coding MGP_129S1SvImJ_T0081987.1 MGP_129S1SvImJ_G0031773.1 mouse_genomes_project 7 17357919 17375317 + MGP_129S1SvImJ_P0081987 Ppp1r13l protein_coding protein_coding MGP_129S1SvImJ_T0081988.1 MGP_129S1SvImJ_G0031773.1 mouse_genomes_project 7 17365288 17366685 + MGP_129S1SvImJ_P0081988 Ppp1r13l protein_coding protein_coding MGP_129S1SvImJ_T0083648.1 MGP_129S1SvImJ_G0032178.1 mouse_genomes_project 7 45017839 45021226 - MGP_129S1SvImJ_P0083648 Atf5 protein_coding protein_coding MGP_129S1SvImJ_T0083649.1 MGP_129S1SvImJ_G0032178.1 mouse_genomes_project 7 45017840 45022167 - MGP_129S1SvImJ_P0083649 Atf5 protein_coding protein_coding MGP_129S1SvImJ_T0082163.1 MGP_129S1SvImJ_G0031828.1 mouse_genomes_project 7 22752982 22766704 - MGP_129S1SvImJ_P0082163 Irgc1 protein_coding protein_coding MGP_129S1SvImJ_T0082164.1 MGP_129S1SvImJ_G0031828.1 mouse_genomes_project 7 22752982 22756590 - MGP_129S1SvImJ_P0082164 Irgc1 protein_coding protein_coding MGP_129S1SvImJ_T0082165.1 MGP_129S1SvImJ_G0031828.1 mouse_genomes_project 7 22754204 22773461 - MGP_129S1SvImJ_P0082165 Irgc1 protein_coding protein_coding MGP_129S1SvImJ_T0082166.1 MGP_129S1SvImJ_G0031828.1 mouse_genomes_project 7 22771769 22773587 - Irgc1 protein_coding processed_transcript MGP_129S1SvImJ_T0082167.1 MGP_129S1SvImJ_G0031828.1 mouse_genomes_project 7 22772172 22773577 - Irgc1 protein_coding processed_transcript MGP_129S1SvImJ_T0015858.1 MGP_129S1SvImJ_G0013947.1 mouse_genomes_project 7 83505089 83505866 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082288.1 MGP_129S1SvImJ_G0031859.1 mouse_genomes_project 7 23722610 23749056 + MGP_129S1SvImJ_P0082288 Cic protein_coding protein_coding MGP_129S1SvImJ_T0082289.1 MGP_129S1SvImJ_G0031859.1 mouse_genomes_project 7 23723293 23726184 + MGP_129S1SvImJ_P0082289 Cic protein_coding protein_coding MGP_129S1SvImJ_T0082290.1 MGP_129S1SvImJ_G0031859.1 mouse_genomes_project 7 23733323 23739866 + Cic protein_coding processed_transcript MGP_129S1SvImJ_T0082291.1 MGP_129S1SvImJ_G0031859.1 mouse_genomes_project 7 23734539 23739829 + Cic protein_coding processed_transcript MGP_129S1SvImJ_T0082292.1 MGP_129S1SvImJ_G0031859.1 mouse_genomes_project 7 23737077 23749045 + MGP_129S1SvImJ_P0082292 Cic protein_coding protein_coding MGP_129S1SvImJ_T0082293.1 MGP_129S1SvImJ_G0031859.1 mouse_genomes_project 7 23737077 23749042 + MGP_129S1SvImJ_P0082293 Cic protein_coding protein_coding MGP_129S1SvImJ_T0082294.1 MGP_129S1SvImJ_G0031859.1 mouse_genomes_project 7 23737706 23746239 + MGP_129S1SvImJ_P0082294 Cic protein_coding protein_coding MGP_129S1SvImJ_T0082295.1 MGP_129S1SvImJ_G0031859.1 mouse_genomes_project 7 23738113 23740092 + Cic protein_coding processed_transcript MGP_129S1SvImJ_T0082296.1 MGP_129S1SvImJ_G0031859.1 mouse_genomes_project 7 23739566 23740581 + Cic protein_coding retained_intron MGP_129S1SvImJ_T0082297.1 MGP_129S1SvImJ_G0031859.1 mouse_genomes_project 7 23740719 23749039 + Cic protein_coding retained_intron MGP_129S1SvImJ_T0082298.1 MGP_129S1SvImJ_G0031859.1 mouse_genomes_project 7 23744159 23744603 + Cic protein_coding retained_intron MGP_129S1SvImJ_T0082299.1 MGP_129S1SvImJ_G0031859.1 mouse_genomes_project 7 23746067 23749042 + MGP_129S1SvImJ_P0082299 Cic protein_coding protein_coding MGP_129S1SvImJ_T0082300.1 MGP_129S1SvImJ_G0031859.1 mouse_genomes_project 7 23746104 23746975 + Cic protein_coding retained_intron MGP_129S1SvImJ_T0082301.1 MGP_129S1SvImJ_G0031859.1 mouse_genomes_project 7 23746831 23747358 + Cic protein_coding retained_intron MGP_129S1SvImJ_T0082302.1 MGP_129S1SvImJ_G0031859.1 mouse_genomes_project 7 23747916 23749042 + MGP_129S1SvImJ_P0082302 Cic protein_coding protein_coding MGP_129S1SvImJ_T0087693.1 MGP_129S1SvImJ_G0033250.1 mouse_genomes_project 7 147493272 147519879 - MGP_129S1SvImJ_P0087693 protein_coding protein_coding MGP_129S1SvImJ_T0086194.1 MGP_129S1SvImJ_G0032926.1 mouse_genomes_project 7 124142076 124164536 - MGP_129S1SvImJ_P0086194 Crym protein_coding protein_coding MGP_129S1SvImJ_T0086195.1 MGP_129S1SvImJ_G0032926.1 mouse_genomes_project 7 124158082 124164536 - Crym protein_coding retained_intron MGP_129S1SvImJ_T0011702.1 MGP_129S1SvImJ_G0009818.1 mouse_genomes_project 7 29296071 29296442 + Gm24757 misc_RNA misc_RNA MGP_129S1SvImJ_T0081545.1 MGP_129S1SvImJ_G0031616.1 mouse_genomes_project 7 4222937 4229694 - MGP_129S1SvImJ_P0081545 Zfp954 protein_coding protein_coding MGP_129S1SvImJ_T0101358.1 MGP_129S1SvImJ_G0039425.1 mouse_genomes_project 7 146639547 146639684 + Snora52 snoRNA snoRNA MGP_129S1SvImJ_T0087862.1 MGP_129S1SvImJ_G0033282.1 mouse_genomes_project 7 149107207 149113342 - MGP_129S1SvImJ_P0087862 Mrgpre protein_coding protein_coding MGP_129S1SvImJ_T0087383.1 MGP_129S1SvImJ_G0033166.1 mouse_genomes_project 7 145230427 145245174 + MGP_129S1SvImJ_P0087383 Mtg1 protein_coding protein_coding MGP_129S1SvImJ_T0087384.1 MGP_129S1SvImJ_G0033166.1 mouse_genomes_project 7 145230512 145236728 + Mtg1 protein_coding retained_intron MGP_129S1SvImJ_T0087385.1 MGP_129S1SvImJ_G0033166.1 mouse_genomes_project 7 145230526 145241861 + Mtg1 protein_coding retained_intron MGP_129S1SvImJ_T0087386.1 MGP_129S1SvImJ_G0033166.1 mouse_genomes_project 7 145230826 145231260 + Mtg1 protein_coding processed_transcript MGP_129S1SvImJ_T0087387.1 MGP_129S1SvImJ_G0033166.1 mouse_genomes_project 7 145234810 145241549 + Mtg1 protein_coding retained_intron MGP_129S1SvImJ_T0087388.1 MGP_129S1SvImJ_G0033166.1 mouse_genomes_project 7 145243346 145244835 + Mtg1 protein_coding processed_transcript MGP_129S1SvImJ_T0086365.1 MGP_129S1SvImJ_G0032964.1 mouse_genomes_project 7 127621772 127646840 - MGP_129S1SvImJ_P0086365 Zkscan2 protein_coding protein_coding MGP_129S1SvImJ_T0086366.1 MGP_129S1SvImJ_G0032964.1 mouse_genomes_project 7 127624132 127627318 - Zkscan2 protein_coding retained_intron MGP_129S1SvImJ_T0086367.1 MGP_129S1SvImJ_G0032964.1 mouse_genomes_project 7 127626530 127631374 - MGP_129S1SvImJ_P0086367 Zkscan2 protein_coding protein_coding MGP_129S1SvImJ_T0086368.1 MGP_129S1SvImJ_G0032964.1 mouse_genomes_project 7 127640606 127646840 - MGP_129S1SvImJ_P0086368 Zkscan2 protein_coding protein_coding MGP_129S1SvImJ_T0081380.1 MGP_129S1SvImJ_G0031553.1 mouse_genomes_project 7 1551373 1576507 - MGP_129S1SvImJ_P0081380 Ppp6r1 protein_coding protein_coding MGP_129S1SvImJ_T0081381.1 MGP_129S1SvImJ_G0031553.1 mouse_genomes_project 7 1555765 1559858 - Ppp6r1 protein_coding retained_intron MGP_129S1SvImJ_T0081382.1 MGP_129S1SvImJ_G0031553.1 mouse_genomes_project 7 1560252 1576478 - Ppp6r1 protein_coding retained_intron MGP_129S1SvImJ_T0081383.1 MGP_129S1SvImJ_G0031553.1 mouse_genomes_project 7 1560990 1563013 - MGP_129S1SvImJ_P0081383 Ppp6r1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081384.1 MGP_129S1SvImJ_G0031553.1 mouse_genomes_project 7 1561831 1567134 - MGP_129S1SvImJ_P0081384 Ppp6r1 protein_coding protein_coding MGP_129S1SvImJ_T0081385.1 MGP_129S1SvImJ_G0031553.1 mouse_genomes_project 7 1562965 1576469 - MGP_129S1SvImJ_P0081385 Ppp6r1 protein_coding protein_coding MGP_129S1SvImJ_T0015918.1 MGP_129S1SvImJ_G0014007.1 mouse_genomes_project 7 130485448 130485696 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082556.1 MGP_129S1SvImJ_G0031921.1 mouse_genomes_project 7 26374082 26394058 + MGP_129S1SvImJ_P0082556 Zfp607b protein_coding protein_coding MGP_129S1SvImJ_T0085488.1 MGP_129S1SvImJ_G0032657.1 mouse_genomes_project 7 106554080 106555875 + MGP_129S1SvImJ_P0085488 protein_coding protein_coding MGP_129S1SvImJ_T0081454.1 MGP_129S1SvImJ_G0031573.1 mouse_genomes_project 7 1936896 1949436 - Zfp579 protein_coding processed_transcript MGP_129S1SvImJ_T0081455.1 MGP_129S1SvImJ_G0031573.1 mouse_genomes_project 7 1946232 1949539 - Zfp579 protein_coding processed_transcript MGP_129S1SvImJ_T0081456.1 MGP_129S1SvImJ_G0031573.1 mouse_genomes_project 7 1946232 1948721 - MGP_129S1SvImJ_P0081456 Zfp579 protein_coding protein_coding MGP_129S1SvImJ_T0081457.1 MGP_129S1SvImJ_G0031573.1 mouse_genomes_project 7 1946234 1949482 - MGP_129S1SvImJ_P0081457 Zfp579 protein_coding protein_coding MGP_129S1SvImJ_T0081458.1 MGP_129S1SvImJ_G0031573.1 mouse_genomes_project 7 1947581 1949466 - MGP_129S1SvImJ_P0081458 Zfp579 protein_coding protein_coding MGP_129S1SvImJ_T0081459.1 MGP_129S1SvImJ_G0031573.1 mouse_genomes_project 7 1948391 1949410 - Zfp579 protein_coding processed_transcript MGP_129S1SvImJ_T0085528.1 MGP_129S1SvImJ_G0032695.1 mouse_genomes_project 7 107248091 107249036 - MGP_129S1SvImJ_P0085528 Olfr640 protein_coding protein_coding MGP_129S1SvImJ_T0087114.1 MGP_129S1SvImJ_G0033096.1 mouse_genomes_project 7 135497290 135548398 + Htra1 protein_coding retained_intron MGP_129S1SvImJ_T0087115.1 MGP_129S1SvImJ_G0033096.1 mouse_genomes_project 7 135497382 135554124 + MGP_129S1SvImJ_P0087115 Htra1 protein_coding protein_coding MGP_129S1SvImJ_T0087116.1 MGP_129S1SvImJ_G0033096.1 mouse_genomes_project 7 135506618 135554124 + Htra1 protein_coding processed_transcript MGP_129S1SvImJ_T0087117.1 MGP_129S1SvImJ_G0033096.1 mouse_genomes_project 7 135550133 135550907 + Htra1 protein_coding retained_intron MGP_129S1SvImJ_T0087118.1 MGP_129S1SvImJ_G0033096.1 mouse_genomes_project 7 135551193 135553860 + Htra1 protein_coding processed_transcript MGP_129S1SvImJ_T0002238.1 MGP_129S1SvImJ_G0002150.1 mouse_genomes_project 7 37022827 37023604 - TEC TEC MGP_129S1SvImJ_T0101972.1 MGP_129S1SvImJ_G0039849.1 mouse_genomes_project 7 32771610 32801558 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101973.1 MGP_129S1SvImJ_G0039849.1 mouse_genomes_project 7 32771776 32773045 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0084149.1 MGP_129S1SvImJ_G0032315.1 mouse_genomes_project 7 56783540 56827661 - MGP_129S1SvImJ_P0084149 Nipa1 protein_coding protein_coding MGP_129S1SvImJ_T0015764.1 MGP_129S1SvImJ_G0013853.1 mouse_genomes_project 7 25760884 25761127 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0087636.1 MGP_129S1SvImJ_G0033234.1 mouse_genomes_project 7 146660272 146664388 + MGP_129S1SvImJ_P0087636 Cd151 protein_coding protein_coding MGP_129S1SvImJ_T0087637.1 MGP_129S1SvImJ_G0033234.1 mouse_genomes_project 7 146660272 146664388 + MGP_129S1SvImJ_P0087637 Cd151 protein_coding protein_coding MGP_129S1SvImJ_T0087638.1 MGP_129S1SvImJ_G0033234.1 mouse_genomes_project 7 146661699 146664388 + MGP_129S1SvImJ_P0087638 Cd151 protein_coding protein_coding MGP_129S1SvImJ_T0102670.1 MGP_129S1SvImJ_G0040503.1 mouse_genomes_project 7 7661116 7664912 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0101347.1 MGP_129S1SvImJ_G0039414.1 mouse_genomes_project 7 118519854 118519986 - Gm24982 snoRNA snoRNA MGP_129S1SvImJ_T0086919.1 MGP_129S1SvImJ_G0033064.1 mouse_genomes_project 7 132302005 132305580 + Kat8 protein_coding retained_intron MGP_129S1SvImJ_T0086920.1 MGP_129S1SvImJ_G0033064.1 mouse_genomes_project 7 132302005 132315370 + MGP_129S1SvImJ_P0086920 Kat8 protein_coding protein_coding MGP_129S1SvImJ_T0086921.1 MGP_129S1SvImJ_G0033064.1 mouse_genomes_project 7 132303644 132310044 + MGP_129S1SvImJ_P0086921 Kat8 protein_coding protein_coding MGP_129S1SvImJ_T0086922.1 MGP_129S1SvImJ_G0033064.1 mouse_genomes_project 7 132309320 132310112 + Kat8 protein_coding retained_intron MGP_129S1SvImJ_T0087097.1 MGP_129S1SvImJ_G0033093.1 mouse_genomes_project 7 135100509 135311883 + MGP_129S1SvImJ_P0087097 Tacc2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0087098.1 MGP_129S1SvImJ_G0033093.1 mouse_genomes_project 7 135103317 135311880 + MGP_129S1SvImJ_P0087098 Tacc2 protein_coding protein_coding MGP_129S1SvImJ_T0087099.1 MGP_129S1SvImJ_G0033093.1 mouse_genomes_project 7 135103317 135311882 + MGP_129S1SvImJ_P0087099 Tacc2 protein_coding protein_coding MGP_129S1SvImJ_T0087100.1 MGP_129S1SvImJ_G0033093.1 mouse_genomes_project 7 135233898 135311882 + MGP_129S1SvImJ_P0087100 Tacc2 protein_coding protein_coding MGP_129S1SvImJ_T0086618.1 MGP_129S1SvImJ_G0033004.1 mouse_genomes_project 7 131157360 131167672 - MGP_129S1SvImJ_P0086618 protein_coding protein_coding MGP_129S1SvImJ_T0086619.1 MGP_129S1SvImJ_G0033004.1 mouse_genomes_project 7 131157980 131167864 - MGP_129S1SvImJ_P0086619 protein_coding protein_coding MGP_129S1SvImJ_T0086620.1 MGP_129S1SvImJ_G0033004.1 mouse_genomes_project 7 131158825 131168186 - MGP_129S1SvImJ_P0086620 protein_coding protein_coding MGP_129S1SvImJ_T0086621.1 MGP_129S1SvImJ_G0033004.1 mouse_genomes_project 7 131158833 131168778 - protein_coding retained_intron MGP_129S1SvImJ_T0086622.1 MGP_129S1SvImJ_G0033004.1 mouse_genomes_project 7 131158980 131168261 - MGP_129S1SvImJ_P0086622 protein_coding protein_coding MGP_129S1SvImJ_T0086623.1 MGP_129S1SvImJ_G0033004.1 mouse_genomes_project 7 131159082 131168133 - protein_coding processed_transcript MGP_129S1SvImJ_T0086624.1 MGP_129S1SvImJ_G0033004.1 mouse_genomes_project 7 131159218 131164131 - MGP_129S1SvImJ_P0086624 protein_coding protein_coding MGP_129S1SvImJ_T0086625.1 MGP_129S1SvImJ_G0033004.1 mouse_genomes_project 7 131159295 131168762 - MGP_129S1SvImJ_P0086625 protein_coding protein_coding MGP_129S1SvImJ_T0086626.1 MGP_129S1SvImJ_G0033004.1 mouse_genomes_project 7 131159330 131168184 - MGP_129S1SvImJ_P0086626 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086627.1 MGP_129S1SvImJ_G0033004.1 mouse_genomes_project 7 131162601 131168270 - protein_coding retained_intron MGP_129S1SvImJ_T0086628.1 MGP_129S1SvImJ_G0033004.1 mouse_genomes_project 7 131164076 131168192 - protein_coding processed_transcript MGP_129S1SvImJ_T0086629.1 MGP_129S1SvImJ_G0033004.1 mouse_genomes_project 7 131164099 131168245 - MGP_129S1SvImJ_P0086629 protein_coding protein_coding MGP_129S1SvImJ_T0086630.1 MGP_129S1SvImJ_G0033004.1 mouse_genomes_project 7 131164114 131168049 - MGP_129S1SvImJ_P0086630 protein_coding protein_coding MGP_129S1SvImJ_T0086631.1 MGP_129S1SvImJ_G0033004.1 mouse_genomes_project 7 131167640 131168249 - protein_coding processed_transcript MGP_129S1SvImJ_T0015736.1 MGP_129S1SvImJ_G0013825.1 mouse_genomes_project 7 14860637 14861102 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082564.1 MGP_129S1SvImJ_G0031926.1 mouse_genomes_project 7 26718997 26745570 - MGP_129S1SvImJ_P0082564 protein_coding protein_coding MGP_129S1SvImJ_T0015756.1 MGP_129S1SvImJ_G0013845.1 mouse_genomes_project 7 24101797 24102374 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101970.1 MGP_129S1SvImJ_G0039848.1 mouse_genomes_project 7 28488310 28516112 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101971.1 MGP_129S1SvImJ_G0039848.1 mouse_genomes_project 7 28490246 28509754 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101307.1 MGP_129S1SvImJ_G0039374.1 mouse_genomes_project 7 45358384 45358471 - Snord35b snoRNA snoRNA MGP_129S1SvImJ_T0085859.1 MGP_129S1SvImJ_G0032856.1 mouse_genomes_project 7 113697922 113762098 + MGP_129S1SvImJ_P0085859 Swap70 protein_coding protein_coding MGP_129S1SvImJ_T0083562.1 MGP_129S1SvImJ_G0032163.1 mouse_genomes_project 7 44638685 44642356 + MGP_129S1SvImJ_P0083562 Josd2 protein_coding protein_coding MGP_129S1SvImJ_T0083563.1 MGP_129S1SvImJ_G0032163.1 mouse_genomes_project 7 44638711 44640884 + Josd2 protein_coding retained_intron MGP_129S1SvImJ_T0083564.1 MGP_129S1SvImJ_G0032163.1 mouse_genomes_project 7 44638727 44642353 + MGP_129S1SvImJ_P0083564 Josd2 protein_coding protein_coding MGP_129S1SvImJ_T0083565.1 MGP_129S1SvImJ_G0032163.1 mouse_genomes_project 7 44638728 44642355 + MGP_129S1SvImJ_P0083565 Josd2 protein_coding protein_coding MGP_129S1SvImJ_T0083566.1 MGP_129S1SvImJ_G0032163.1 mouse_genomes_project 7 44638741 44642240 + MGP_129S1SvImJ_P0083566 Josd2 protein_coding protein_coding MGP_129S1SvImJ_T0083567.1 MGP_129S1SvImJ_G0032163.1 mouse_genomes_project 7 44638744 44642366 + MGP_129S1SvImJ_P0083567 Josd2 protein_coding protein_coding MGP_129S1SvImJ_T0083568.1 MGP_129S1SvImJ_G0032163.1 mouse_genomes_project 7 44638748 44640018 + Josd2 protein_coding retained_intron MGP_129S1SvImJ_T0083569.1 MGP_129S1SvImJ_G0032163.1 mouse_genomes_project 7 44638750 44642352 + MGP_129S1SvImJ_P0083569 Josd2 protein_coding protein_coding MGP_129S1SvImJ_T0083570.1 MGP_129S1SvImJ_G0032163.1 mouse_genomes_project 7 44638755 44640140 + Josd2 protein_coding retained_intron MGP_129S1SvImJ_T0083571.1 MGP_129S1SvImJ_G0032163.1 mouse_genomes_project 7 44638777 44642325 + MGP_129S1SvImJ_P0083571 Josd2 protein_coding protein_coding MGP_129S1SvImJ_T0083572.1 MGP_129S1SvImJ_G0032163.1 mouse_genomes_project 7 44638781 44640055 + Josd2 protein_coding retained_intron MGP_129S1SvImJ_T0083573.1 MGP_129S1SvImJ_G0032163.1 mouse_genomes_project 7 44638790 44641880 + MGP_129S1SvImJ_P0083573 Josd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083574.1 MGP_129S1SvImJ_G0032163.1 mouse_genomes_project 7 44638794 44640554 + Josd2 protein_coding processed_transcript MGP_129S1SvImJ_T0083575.1 MGP_129S1SvImJ_G0032163.1 mouse_genomes_project 7 44638794 44642355 + MGP_129S1SvImJ_P0083575 Josd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083576.1 MGP_129S1SvImJ_G0032163.1 mouse_genomes_project 7 44638799 44642347 + MGP_129S1SvImJ_P0083576 Josd2 protein_coding protein_coding MGP_129S1SvImJ_T0083577.1 MGP_129S1SvImJ_G0032163.1 mouse_genomes_project 7 44638856 44642356 + Josd2 protein_coding retained_intron MGP_129S1SvImJ_T0083578.1 MGP_129S1SvImJ_G0032163.1 mouse_genomes_project 7 44638887 44639676 + Josd2 protein_coding retained_intron MGP_129S1SvImJ_T0083579.1 MGP_129S1SvImJ_G0032163.1 mouse_genomes_project 7 44639531 44642307 + Josd2 protein_coding processed_transcript MGP_129S1SvImJ_T0102811.1 MGP_129S1SvImJ_G0040643.1 mouse_genomes_project 7 107208149 107209055 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0009028.1 MGP_129S1SvImJ_G0007271.1 mouse_genomes_project 7 131099578 131107924 - lincRNA lincRNA MGP_129S1SvImJ_T0082928.1 MGP_129S1SvImJ_G0032021.1 mouse_genomes_project 7 29442094 29452835 - Kirrel2 protein_coding retained_intron MGP_129S1SvImJ_T0082929.1 MGP_129S1SvImJ_G0032021.1 mouse_genomes_project 7 29442096 29452698 - MGP_129S1SvImJ_P0082929 Kirrel2 protein_coding protein_coding MGP_129S1SvImJ_T0082930.1 MGP_129S1SvImJ_G0032021.1 mouse_genomes_project 7 29442628 29446524 - MGP_129S1SvImJ_P0082930 Kirrel2 protein_coding protein_coding MGP_129S1SvImJ_T0082931.1 MGP_129S1SvImJ_G0032021.1 mouse_genomes_project 7 29442676 29452079 - MGP_129S1SvImJ_P0082931 Kirrel2 protein_coding protein_coding MGP_129S1SvImJ_T0082932.1 MGP_129S1SvImJ_G0032021.1 mouse_genomes_project 7 29452213 29452873 - Kirrel2 protein_coding processed_transcript MGP_129S1SvImJ_T0085978.1 MGP_129S1SvImJ_G0032881.1 mouse_genomes_project 7 117925484 117938737 - MGP_129S1SvImJ_P0085978 Psma1 protein_coding protein_coding MGP_129S1SvImJ_T0085979.1 MGP_129S1SvImJ_G0032881.1 mouse_genomes_project 7 117925673 117938645 - Psma1 protein_coding processed_transcript MGP_129S1SvImJ_T0085980.1 MGP_129S1SvImJ_G0032881.1 mouse_genomes_project 7 117931367 117938673 - Psma1 protein_coding retained_intron MGP_129S1SvImJ_T0085981.1 MGP_129S1SvImJ_G0032881.1 mouse_genomes_project 7 117935749 117938662 - Psma1 protein_coding retained_intron MGP_129S1SvImJ_T0085982.1 MGP_129S1SvImJ_G0032882.1 mouse_genomes_project 7 118079449 118209269 + MGP_129S1SvImJ_P0085982 Pde3b protein_coding protein_coding MGP_129S1SvImJ_T0085983.1 MGP_129S1SvImJ_G0032882.1 mouse_genomes_project 7 118176376 118178534 + Pde3b protein_coding retained_intron MGP_129S1SvImJ_T0085984.1 MGP_129S1SvImJ_G0032882.1 mouse_genomes_project 7 118191803 118201040 + Pde3b protein_coding retained_intron MGP_129S1SvImJ_T0085776.1 MGP_129S1SvImJ_G0032819.1 mouse_genomes_project 7 111801765 111802710 + MGP_129S1SvImJ_P0085776 Olfr497 protein_coding protein_coding MGP_129S1SvImJ_T0015854.1 MGP_129S1SvImJ_G0013943.1 mouse_genomes_project 7 82404874 82406405 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008871.1 MGP_129S1SvImJ_G0007167.1 mouse_genomes_project 7 43528580 43533734 - Gm2511 lincRNA lincRNA MGP_129S1SvImJ_T0008872.1 MGP_129S1SvImJ_G0007167.1 mouse_genomes_project 7 43528583 43536386 - Gm2511 lincRNA lincRNA MGP_129S1SvImJ_T0008873.1 MGP_129S1SvImJ_G0007167.1 mouse_genomes_project 7 43532983 43535963 - Gm2511 lincRNA lincRNA MGP_129S1SvImJ_T0002328.1 MGP_129S1SvImJ_G0002239.1 mouse_genomes_project 7 130289880 130291422 - TEC TEC MGP_129S1SvImJ_T0082028.1 MGP_129S1SvImJ_G0031786.1 mouse_genomes_project 7 17609938 17637099 - MGP_129S1SvImJ_P0082028 Clasrp protein_coding protein_coding MGP_129S1SvImJ_T0015856.1 MGP_129S1SvImJ_G0013945.1 mouse_genomes_project 7 83196147 83196495 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005260.1 MGP_129S1SvImJ_G0004472.1 mouse_genomes_project 7 82376919 82379228 + Gm44851 antisense antisense MGP_129S1SvImJ_T0100098.1 MGP_129S1SvImJ_G0038165.1 mouse_genomes_project 7 144202190 144202289 - Gm27975 snRNA snRNA MGP_129S1SvImJ_T0101327.1 MGP_129S1SvImJ_G0039394.1 mouse_genomes_project 7 70305039 70305176 - Gm23795 snoRNA snoRNA MGP_129S1SvImJ_T0005298.1 MGP_129S1SvImJ_G0004497.1 mouse_genomes_project 7 124882683 124885280 - antisense antisense MGP_129S1SvImJ_T0002223.1 MGP_129S1SvImJ_G0002135.1 mouse_genomes_project 7 16930275 16933514 - TEC TEC MGP_129S1SvImJ_T0087216.1 MGP_129S1SvImJ_G0033123.1 mouse_genomes_project 7 138443176 138466717 - Uros protein_coding retained_intron MGP_129S1SvImJ_T0087217.1 MGP_129S1SvImJ_G0033123.1 mouse_genomes_project 7 138443289 138466581 - MGP_129S1SvImJ_P0087217 Uros protein_coding protein_coding MGP_129S1SvImJ_T0087218.1 MGP_129S1SvImJ_G0033123.1 mouse_genomes_project 7 138443289 138466692 - MGP_129S1SvImJ_P0087218 Uros protein_coding protein_coding MGP_129S1SvImJ_T0087219.1 MGP_129S1SvImJ_G0033123.1 mouse_genomes_project 7 138443298 138466904 - MGP_129S1SvImJ_P0087219 Uros protein_coding protein_coding MGP_129S1SvImJ_T0087220.1 MGP_129S1SvImJ_G0033123.1 mouse_genomes_project 7 138443894 138455673 - Uros protein_coding processed_transcript MGP_129S1SvImJ_T0087221.1 MGP_129S1SvImJ_G0033123.1 mouse_genomes_project 7 138449067 138466682 - MGP_129S1SvImJ_P0087221 Uros protein_coding protein_coding MGP_129S1SvImJ_T0087222.1 MGP_129S1SvImJ_G0033123.1 mouse_genomes_project 7 138459461 138460239 - MGP_129S1SvImJ_P0087222 Uros protein_coding protein_coding MGP_129S1SvImJ_T0087223.1 MGP_129S1SvImJ_G0033123.1 mouse_genomes_project 7 138459515 138466680 - MGP_129S1SvImJ_P0087223 Uros protein_coding protein_coding MGP_129S1SvImJ_T0087224.1 MGP_129S1SvImJ_G0033123.1 mouse_genomes_project 7 138459517 138467695 - MGP_129S1SvImJ_P0087224 Uros protein_coding protein_coding MGP_129S1SvImJ_T0015700.1 MGP_129S1SvImJ_G0013789.1 mouse_genomes_project 7 1107853 1108007 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084283.1 MGP_129S1SvImJ_G0032345.1 mouse_genomes_project 7 67061911 67160970 + MGP_129S1SvImJ_P0084283 Pcsk6 protein_coding protein_coding MGP_129S1SvImJ_T0084284.1 MGP_129S1SvImJ_G0032345.1 mouse_genomes_project 7 67062206 67267063 + MGP_129S1SvImJ_P0084284 Pcsk6 protein_coding protein_coding MGP_129S1SvImJ_T0084285.1 MGP_129S1SvImJ_G0032345.1 mouse_genomes_project 7 67062313 67267011 + MGP_129S1SvImJ_P0084285 Pcsk6 protein_coding protein_coding MGP_129S1SvImJ_T0084286.1 MGP_129S1SvImJ_G0032345.1 mouse_genomes_project 7 67063862 67267017 + MGP_129S1SvImJ_P0084286 Pcsk6 protein_coding protein_coding MGP_129S1SvImJ_T0084287.1 MGP_129S1SvImJ_G0032345.1 mouse_genomes_project 7 67160997 67171175 + Pcsk6 protein_coding retained_intron MGP_129S1SvImJ_T0084288.1 MGP_129S1SvImJ_G0032345.1 mouse_genomes_project 7 67254940 67260205 + Pcsk6 protein_coding retained_intron MGP_129S1SvImJ_T0082856.1 MGP_129S1SvImJ_G0032004.1 mouse_genomes_project 7 29160095 29161953 + MGP_129S1SvImJ_P0082856 Cox7a1 protein_coding protein_coding MGP_129S1SvImJ_T0084494.1 MGP_129S1SvImJ_G0032385.1 mouse_genomes_project 7 80989408 80999383 - Mfge8 protein_coding retained_intron MGP_129S1SvImJ_T0084495.1 MGP_129S1SvImJ_G0032385.1 mouse_genomes_project 7 80989408 81004655 - MGP_129S1SvImJ_P0084495 Mfge8 protein_coding protein_coding MGP_129S1SvImJ_T0084496.1 MGP_129S1SvImJ_G0032385.1 mouse_genomes_project 7 80989409 81004662 - MGP_129S1SvImJ_P0084496 Mfge8 protein_coding protein_coding MGP_129S1SvImJ_T0084497.1 MGP_129S1SvImJ_G0032385.1 mouse_genomes_project 7 80989756 81004633 - MGP_129S1SvImJ_P0084497 Mfge8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084498.1 MGP_129S1SvImJ_G0032385.1 mouse_genomes_project 7 80989779 80992628 - Mfge8 protein_coding retained_intron MGP_129S1SvImJ_T0084499.1 MGP_129S1SvImJ_G0032385.1 mouse_genomes_project 7 80992135 80998404 - Mfge8 protein_coding retained_intron MGP_129S1SvImJ_T0084500.1 MGP_129S1SvImJ_G0032385.1 mouse_genomes_project 7 80997474 80998647 - Mfge8 protein_coding retained_intron MGP_129S1SvImJ_T0084501.1 MGP_129S1SvImJ_G0032385.1 mouse_genomes_project 7 80998465 81003167 - Mfge8 protein_coding processed_transcript MGP_129S1SvImJ_T0084502.1 MGP_129S1SvImJ_G0032385.1 mouse_genomes_project 7 81000519 81004591 - Mfge8 protein_coding retained_intron MGP_129S1SvImJ_T0084503.1 MGP_129S1SvImJ_G0032385.1 mouse_genomes_project 7 81000933 81003837 - Mfge8 protein_coding processed_transcript MGP_129S1SvImJ_T0083371.1 MGP_129S1SvImJ_G0032101.1 mouse_genomes_project 7 37741739 37755885 + MGP_129S1SvImJ_P0083371 1600014C10Rik protein_coding protein_coding MGP_129S1SvImJ_T0083372.1 MGP_129S1SvImJ_G0032101.1 mouse_genomes_project 7 37741762 37742422 + 1600014C10Rik protein_coding processed_transcript MGP_129S1SvImJ_T0083373.1 MGP_129S1SvImJ_G0032101.1 mouse_genomes_project 7 37741783 37754911 + MGP_129S1SvImJ_P0083373 1600014C10Rik protein_coding protein_coding MGP_129S1SvImJ_T0083374.1 MGP_129S1SvImJ_G0032101.1 mouse_genomes_project 7 37742175 37755885 + MGP_129S1SvImJ_P0083374 1600014C10Rik protein_coding protein_coding MGP_129S1SvImJ_T0083375.1 MGP_129S1SvImJ_G0032101.1 mouse_genomes_project 7 37742370 37747454 + MGP_129S1SvImJ_P0083375 1600014C10Rik protein_coding protein_coding MGP_129S1SvImJ_T0083376.1 MGP_129S1SvImJ_G0032101.1 mouse_genomes_project 7 37742420 37753293 + MGP_129S1SvImJ_P0083376 1600014C10Rik protein_coding protein_coding MGP_129S1SvImJ_T0083377.1 MGP_129S1SvImJ_G0032101.1 mouse_genomes_project 7 37744786 37753585 + MGP_129S1SvImJ_P0083377 1600014C10Rik protein_coding protein_coding MGP_129S1SvImJ_T0087412.1 MGP_129S1SvImJ_G0033187.1 mouse_genomes_project 7 145811515 145812398 + MGP_129S1SvImJ_P0087412 Olfr45 protein_coding protein_coding MGP_129S1SvImJ_T0005201.1 MGP_129S1SvImJ_G0004429.1 mouse_genomes_project 7 28490096 28492547 - Gm29326 antisense antisense MGP_129S1SvImJ_T0081485.1 MGP_129S1SvImJ_G0031590.1 mouse_genomes_project 7 2301522 2358075 - MGP_129S1SvImJ_P0081485 Nlrp2 protein_coding protein_coding MGP_129S1SvImJ_T0084138.1 MGP_129S1SvImJ_G0032314.1 mouse_genomes_project 7 56744219 56768458 - MGP_129S1SvImJ_P0084138 Nipa2 protein_coding protein_coding MGP_129S1SvImJ_T0084139.1 MGP_129S1SvImJ_G0032314.1 mouse_genomes_project 7 56744219 56768421 - MGP_129S1SvImJ_P0084139 Nipa2 protein_coding protein_coding MGP_129S1SvImJ_T0084140.1 MGP_129S1SvImJ_G0032314.1 mouse_genomes_project 7 56744219 56768227 - MGP_129S1SvImJ_P0084140 Nipa2 protein_coding protein_coding MGP_129S1SvImJ_T0084141.1 MGP_129S1SvImJ_G0032314.1 mouse_genomes_project 7 56744219 56768432 - MGP_129S1SvImJ_P0084141 Nipa2 protein_coding protein_coding MGP_129S1SvImJ_T0084142.1 MGP_129S1SvImJ_G0032314.1 mouse_genomes_project 7 56746181 56768374 - Nipa2 protein_coding processed_transcript MGP_129S1SvImJ_T0084143.1 MGP_129S1SvImJ_G0032314.1 mouse_genomes_project 7 56746446 56751100 - Nipa2 protein_coding retained_intron MGP_129S1SvImJ_T0084144.1 MGP_129S1SvImJ_G0032314.1 mouse_genomes_project 7 56748837 56768458 - MGP_129S1SvImJ_P0084144 Nipa2 protein_coding protein_coding MGP_129S1SvImJ_T0084145.1 MGP_129S1SvImJ_G0032314.1 mouse_genomes_project 7 56748885 56768412 - MGP_129S1SvImJ_P0084145 Nipa2 protein_coding protein_coding MGP_129S1SvImJ_T0084146.1 MGP_129S1SvImJ_G0032314.1 mouse_genomes_project 7 56754982 56768450 - Nipa2 protein_coding retained_intron MGP_129S1SvImJ_T0084147.1 MGP_129S1SvImJ_G0032314.1 mouse_genomes_project 7 56755159 56757977 - Nipa2 protein_coding retained_intron MGP_129S1SvImJ_T0084148.1 MGP_129S1SvImJ_G0032314.1 mouse_genomes_project 7 56757639 56768155 - MGP_129S1SvImJ_P0084148 Nipa2 protein_coding protein_coding MGP_129S1SvImJ_T0005282.1 MGP_129S1SvImJ_G0004487.1 mouse_genomes_project 7 102477617 102483186 + Gm15635 antisense antisense MGP_129S1SvImJ_T0005283.1 MGP_129S1SvImJ_G0004487.1 mouse_genomes_project 7 102481275 102483097 + Gm15635 antisense antisense MGP_129S1SvImJ_T0005284.1 MGP_129S1SvImJ_G0004487.1 mouse_genomes_project 7 102481327 102483559 + Gm15635 antisense antisense MGP_129S1SvImJ_T0010960.1 MGP_129S1SvImJ_G0009076.1 mouse_genomes_project 7 149108932 149108998 + Gm22064 miRNA miRNA MGP_129S1SvImJ_T0082671.1 MGP_129S1SvImJ_G0031960.1 mouse_genomes_project 7 27605645 27629751 + Sirt2 protein_coding processed_transcript MGP_129S1SvImJ_T0082672.1 MGP_129S1SvImJ_G0031960.1 mouse_genomes_project 7 27605662 27629756 + MGP_129S1SvImJ_P0082672 Sirt2 protein_coding protein_coding MGP_129S1SvImJ_T0082673.1 MGP_129S1SvImJ_G0031960.1 mouse_genomes_project 7 27605677 27629753 + MGP_129S1SvImJ_P0082673 Sirt2 protein_coding protein_coding MGP_129S1SvImJ_T0082674.1 MGP_129S1SvImJ_G0031960.1 mouse_genomes_project 7 27606164 27629751 + Sirt2 protein_coding processed_transcript MGP_129S1SvImJ_T0082675.1 MGP_129S1SvImJ_G0031960.1 mouse_genomes_project 7 27615726 27616580 + Sirt2 protein_coding retained_intron MGP_129S1SvImJ_T0082676.1 MGP_129S1SvImJ_G0031960.1 mouse_genomes_project 7 27615876 27624458 + Sirt2 protein_coding retained_intron MGP_129S1SvImJ_T0082677.1 MGP_129S1SvImJ_G0031960.1 mouse_genomes_project 7 27625745 27628890 + Sirt2 protein_coding processed_transcript MGP_129S1SvImJ_T0082678.1 MGP_129S1SvImJ_G0031960.1 mouse_genomes_project 7 27626514 27628749 + Sirt2 protein_coding retained_intron MGP_129S1SvImJ_T0082679.1 MGP_129S1SvImJ_G0031960.1 mouse_genomes_project 7 27626688 27629383 + Sirt2 protein_coding retained_intron MGP_129S1SvImJ_T0086251.1 MGP_129S1SvImJ_G0032942.1 mouse_genomes_project 7 125431729 125437937 + MGP_129S1SvImJ_P0086251 Hs3st2 protein_coding protein_coding MGP_129S1SvImJ_T0086252.1 MGP_129S1SvImJ_G0032942.1 mouse_genomes_project 7 125432160 125535438 + MGP_129S1SvImJ_P0086252 Hs3st2 protein_coding protein_coding MGP_129S1SvImJ_T0085458.1 MGP_129S1SvImJ_G0032630.1 mouse_genomes_project 7 105964923 105965968 + MGP_129S1SvImJ_P0085458 Olfr570 protein_coding protein_coding MGP_129S1SvImJ_T0081686.1 MGP_129S1SvImJ_G0031678.1 mouse_genomes_project 7 11018090 11075022 + MGP_129S1SvImJ_P0081686 protein_coding protein_coding MGP_129S1SvImJ_T0015765.1 MGP_129S1SvImJ_G0013854.1 mouse_genomes_project 7 28791954 28792370 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085596.1 MGP_129S1SvImJ_G0032734.1 mouse_genomes_project 7 108201532 108202471 - MGP_129S1SvImJ_P0085596 Olfr672 protein_coding protein_coding MGP_129S1SvImJ_T0010920.1 MGP_129S1SvImJ_G0009036.1 mouse_genomes_project 7 75404642 75404694 + Mir7234 miRNA miRNA MGP_129S1SvImJ_T0081937.1 MGP_129S1SvImJ_G0031759.1 mouse_genomes_project 7 17052098 17072813 - MGP_129S1SvImJ_P0081937 Gm4969 protein_coding protein_coding MGP_129S1SvImJ_T0081938.1 MGP_129S1SvImJ_G0031759.1 mouse_genomes_project 7 17054603 17072786 - MGP_129S1SvImJ_P0081938 Gm4969 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087061.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134667328 134775513 - MGP_129S1SvImJ_P0087061 Fgfr2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087062.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134667328 134775513 - MGP_129S1SvImJ_P0087062 Fgfr2 protein_coding protein_coding MGP_129S1SvImJ_T0087063.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134668424 134672701 - Fgfr2 protein_coding retained_intron MGP_129S1SvImJ_T0087064.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134668525 134775459 - MGP_129S1SvImJ_P0087064 Fgfr2 protein_coding protein_coding MGP_129S1SvImJ_T0087065.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134668525 134775531 - MGP_129S1SvImJ_P0087065 Fgfr2 protein_coding protein_coding MGP_129S1SvImJ_T0087066.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134668624 134676731 - Fgfr2 protein_coding retained_intron MGP_129S1SvImJ_T0087067.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134668775 134771125 - MGP_129S1SvImJ_P0087067 Fgfr2 protein_coding protein_coding MGP_129S1SvImJ_T0087068.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134668775 134771125 - MGP_129S1SvImJ_P0087068 Fgfr2 protein_coding protein_coding MGP_129S1SvImJ_T0087069.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134668775 134771125 - MGP_129S1SvImJ_P0087069 Fgfr2 protein_coding protein_coding MGP_129S1SvImJ_T0087070.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134668775 134771125 - MGP_129S1SvImJ_P0087070 Fgfr2 protein_coding protein_coding MGP_129S1SvImJ_T0087071.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134668775 134771125 - MGP_129S1SvImJ_P0087071 Fgfr2 protein_coding protein_coding MGP_129S1SvImJ_T0087072.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134668775 134771125 - MGP_129S1SvImJ_P0087072 Fgfr2 protein_coding protein_coding MGP_129S1SvImJ_T0087073.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134668775 134771125 - MGP_129S1SvImJ_P0087073 Fgfr2 protein_coding protein_coding MGP_129S1SvImJ_T0087074.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134668775 134771125 - MGP_129S1SvImJ_P0087074 Fgfr2 protein_coding protein_coding MGP_129S1SvImJ_T0087075.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134668775 134771125 - MGP_129S1SvImJ_P0087075 Fgfr2 protein_coding protein_coding MGP_129S1SvImJ_T0087076.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134668775 134771125 - MGP_129S1SvImJ_P0087076 Fgfr2 protein_coding protein_coding MGP_129S1SvImJ_T0087077.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134668775 134771125 - MGP_129S1SvImJ_P0087077 Fgfr2 protein_coding protein_coding MGP_129S1SvImJ_T0087078.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134668775 134771125 - MGP_129S1SvImJ_P0087078 Fgfr2 protein_coding protein_coding MGP_129S1SvImJ_T0087079.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134668775 134771125 - MGP_129S1SvImJ_P0087079 Fgfr2 protein_coding protein_coding MGP_129S1SvImJ_T0087080.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134674558 134682881 - Fgfr2 protein_coding retained_intron MGP_129S1SvImJ_T0087081.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134682596 134687456 - Fgfr2 protein_coding retained_intron MGP_129S1SvImJ_T0087082.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134685148 134702913 - Fgfr2 protein_coding retained_intron MGP_129S1SvImJ_T0087083.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134689588 134702425 - Fgfr2 protein_coding retained_intron MGP_129S1SvImJ_T0087084.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134705888 134735772 - MGP_129S1SvImJ_P0087084 Fgfr2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087085.1 MGP_129S1SvImJ_G0033090.1 mouse_genomes_project 7 134750303 134773243 - Fgfr2 protein_coding retained_intron MGP_129S1SvImJ_T0082875.1 MGP_129S1SvImJ_G0032009.1 mouse_genomes_project 7 29221105 29265648 - MGP_129S1SvImJ_P0082875 Wdr62 protein_coding protein_coding MGP_129S1SvImJ_T0082876.1 MGP_129S1SvImJ_G0032009.1 mouse_genomes_project 7 29221105 29265625 - MGP_129S1SvImJ_P0082876 Wdr62 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082877.1 MGP_129S1SvImJ_G0032009.1 mouse_genomes_project 7 29221105 29244819 - MGP_129S1SvImJ_P0082877 Wdr62 protein_coding protein_coding MGP_129S1SvImJ_T0082878.1 MGP_129S1SvImJ_G0032009.1 mouse_genomes_project 7 29221110 29221851 - Wdr62 protein_coding processed_transcript MGP_129S1SvImJ_T0082879.1 MGP_129S1SvImJ_G0032009.1 mouse_genomes_project 7 29222664 29223246 - MGP_129S1SvImJ_P0082879 Wdr62 protein_coding protein_coding MGP_129S1SvImJ_T0082880.1 MGP_129S1SvImJ_G0032009.1 mouse_genomes_project 7 29226397 29232838 - Wdr62 protein_coding retained_intron MGP_129S1SvImJ_T0082881.1 MGP_129S1SvImJ_G0032009.1 mouse_genomes_project 7 29230784 29231528 - Wdr62 protein_coding retained_intron MGP_129S1SvImJ_T0086827.1 MGP_129S1SvImJ_G0033046.1 mouse_genomes_project 7 131950999 131967020 + MGP_129S1SvImJ_P0086827 Rnf40 protein_coding protein_coding MGP_129S1SvImJ_T0086828.1 MGP_129S1SvImJ_G0033046.1 mouse_genomes_project 7 131951151 131965815 + MGP_129S1SvImJ_P0086828 Rnf40 protein_coding protein_coding MGP_129S1SvImJ_T0086829.1 MGP_129S1SvImJ_G0033046.1 mouse_genomes_project 7 131951151 131965806 + MGP_129S1SvImJ_P0086829 Rnf40 protein_coding protein_coding MGP_129S1SvImJ_T0086830.1 MGP_129S1SvImJ_G0033046.1 mouse_genomes_project 7 131954647 131956957 + Rnf40 protein_coding retained_intron MGP_129S1SvImJ_T0086831.1 MGP_129S1SvImJ_G0033046.1 mouse_genomes_project 7 131955108 131958463 + Rnf40 protein_coding retained_intron MGP_129S1SvImJ_T0086832.1 MGP_129S1SvImJ_G0033046.1 mouse_genomes_project 7 131959043 131962824 + Rnf40 protein_coding retained_intron MGP_129S1SvImJ_T0087573.1 MGP_129S1SvImJ_G0033228.1 mouse_genomes_project 7 146615089 146618069 - MGP_129S1SvImJ_P0087573 Cend1 protein_coding protein_coding MGP_129S1SvImJ_T0087574.1 MGP_129S1SvImJ_G0033228.1 mouse_genomes_project 7 146615089 146618135 - MGP_129S1SvImJ_P0087574 Cend1 protein_coding protein_coding MGP_129S1SvImJ_T0087575.1 MGP_129S1SvImJ_G0033228.1 mouse_genomes_project 7 146615094 146618062 - MGP_129S1SvImJ_P0087575 Cend1 protein_coding protein_coding MGP_129S1SvImJ_T0087576.1 MGP_129S1SvImJ_G0033228.1 mouse_genomes_project 7 146615094 146617995 - MGP_129S1SvImJ_P0087576 Cend1 protein_coding protein_coding MGP_129S1SvImJ_T0102688.1 MGP_129S1SvImJ_G0040521.1 mouse_genomes_project 7 9520788 9521777 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015857.1 MGP_129S1SvImJ_G0013946.1 mouse_genomes_project 7 83262329 83262842 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084514.1 MGP_129S1SvImJ_G0032388.1 mouse_genomes_project 7 81273938 81285022 + MGP_129S1SvImJ_P0084514 Fanci protein_coding protein_coding MGP_129S1SvImJ_T0084515.1 MGP_129S1SvImJ_G0032388.1 mouse_genomes_project 7 81274299 81292742 + MGP_129S1SvImJ_P0084515 Fanci protein_coding protein_coding MGP_129S1SvImJ_T0084516.1 MGP_129S1SvImJ_G0032388.1 mouse_genomes_project 7 81274303 81335209 + MGP_129S1SvImJ_P0084516 Fanci protein_coding protein_coding MGP_129S1SvImJ_T0084517.1 MGP_129S1SvImJ_G0032388.1 mouse_genomes_project 7 81274344 81335209 + MGP_129S1SvImJ_P0084517 Fanci protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084518.1 MGP_129S1SvImJ_G0032388.1 mouse_genomes_project 7 81282275 81319845 + MGP_129S1SvImJ_P0084518 Fanci protein_coding protein_coding MGP_129S1SvImJ_T0084519.1 MGP_129S1SvImJ_G0032388.1 mouse_genomes_project 7 81296800 81311365 + MGP_129S1SvImJ_P0084519 Fanci protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084520.1 MGP_129S1SvImJ_G0032388.1 mouse_genomes_project 7 81325591 81330670 + MGP_129S1SvImJ_P0084520 Fanci protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082608.1 MGP_129S1SvImJ_G0031941.1 mouse_genomes_project 7 27142338 27154979 - MGP_129S1SvImJ_P0082608 Plekhg2 protein_coding protein_coding MGP_129S1SvImJ_T0082609.1 MGP_129S1SvImJ_G0031941.1 mouse_genomes_project 7 27142339 27155323 - Plekhg2 protein_coding retained_intron MGP_129S1SvImJ_T0082610.1 MGP_129S1SvImJ_G0031941.1 mouse_genomes_project 7 27142339 27146066 - Plekhg2 protein_coding retained_intron MGP_129S1SvImJ_T0082611.1 MGP_129S1SvImJ_G0031941.1 mouse_genomes_project 7 27142339 27154320 - MGP_129S1SvImJ_P0082611 Plekhg2 protein_coding protein_coding MGP_129S1SvImJ_T0082612.1 MGP_129S1SvImJ_G0031941.1 mouse_genomes_project 7 27142339 27155240 - MGP_129S1SvImJ_P0082612 Plekhg2 protein_coding protein_coding MGP_129S1SvImJ_T0082613.1 MGP_129S1SvImJ_G0031941.1 mouse_genomes_project 7 27143826 27155345 - MGP_129S1SvImJ_P0082613 Plekhg2 protein_coding protein_coding MGP_129S1SvImJ_T0082614.1 MGP_129S1SvImJ_G0031941.1 mouse_genomes_project 7 27146728 27148217 - Plekhg2 protein_coding retained_intron MGP_129S1SvImJ_T0082615.1 MGP_129S1SvImJ_G0031941.1 mouse_genomes_project 7 27151134 27154473 - MGP_129S1SvImJ_P0082615 Plekhg2 protein_coding protein_coding MGP_129S1SvImJ_T0082616.1 MGP_129S1SvImJ_G0031941.1 mouse_genomes_project 7 27152826 27154826 - MGP_129S1SvImJ_P0082616 Plekhg2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082617.1 MGP_129S1SvImJ_G0031941.1 mouse_genomes_project 7 27153161 27154254 - MGP_129S1SvImJ_P0082617 Plekhg2 protein_coding protein_coding MGP_129S1SvImJ_T0082282.1 MGP_129S1SvImJ_G0031856.1 mouse_genomes_project 7 23673817 23679874 + MGP_129S1SvImJ_P0082282 Zfp526 protein_coding protein_coding MGP_129S1SvImJ_T0002318.1 MGP_129S1SvImJ_G0002229.1 mouse_genomes_project 7 126243503 126244510 - TEC TEC MGP_129S1SvImJ_T0005276.1 MGP_129S1SvImJ_G0004483.1 mouse_genomes_project 7 99502690 99507754 - Gm15416 antisense antisense MGP_129S1SvImJ_T0009005.1 MGP_129S1SvImJ_G0007255.1 mouse_genomes_project 7 118739096 118775634 + Gm44944 lincRNA lincRNA MGP_129S1SvImJ_T0009006.1 MGP_129S1SvImJ_G0007255.1 mouse_genomes_project 7 118774208 118775923 + Gm44944 lincRNA lincRNA MGP_129S1SvImJ_T0009007.1 MGP_129S1SvImJ_G0007255.1 mouse_genomes_project 7 118775647 118775952 + Gm44944 lincRNA lincRNA MGP_129S1SvImJ_T0081982.1 MGP_129S1SvImJ_G0031772.1 mouse_genomes_project 7 17353583 17356185 - MGP_129S1SvImJ_P0081982 Cd3eap protein_coding protein_coding MGP_129S1SvImJ_T0081983.1 MGP_129S1SvImJ_G0031772.1 mouse_genomes_project 7 17355541 17356187 - Cd3eap protein_coding retained_intron MGP_129S1SvImJ_T0005309.1 MGP_129S1SvImJ_G0004505.1 mouse_genomes_project 7 130932184 130933236 - 2510046G10Rik antisense antisense MGP_129S1SvImJ_T0005310.1 MGP_129S1SvImJ_G0004505.1 mouse_genomes_project 7 130932864 130933212 - 2510046G10Rik antisense antisense MGP_129S1SvImJ_T0081433.1 MGP_129S1SvImJ_G0031564.1 mouse_genomes_project 7 1734363 1760226 - MGP_129S1SvImJ_P0081433 Ube2s protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081434.1 MGP_129S1SvImJ_G0031564.1 mouse_genomes_project 7 1754009 1758994 - Ube2s protein_coding retained_intron MGP_129S1SvImJ_T0081435.1 MGP_129S1SvImJ_G0031564.1 mouse_genomes_project 7 1754998 1760465 - MGP_129S1SvImJ_P0081435 Ube2s protein_coding protein_coding MGP_129S1SvImJ_T0081436.1 MGP_129S1SvImJ_G0031564.1 mouse_genomes_project 7 1756296 1759999 - MGP_129S1SvImJ_P0081436 Ube2s protein_coding protein_coding MGP_129S1SvImJ_T0081437.1 MGP_129S1SvImJ_G0031564.1 mouse_genomes_project 7 1758317 1759781 - MGP_129S1SvImJ_P0081437 Ube2s protein_coding protein_coding MGP_129S1SvImJ_T0082086.1 MGP_129S1SvImJ_G0031801.1 mouse_genomes_project 7 17959856 17976348 - MGP_129S1SvImJ_P0082086 Pvr protein_coding protein_coding MGP_129S1SvImJ_T0082087.1 MGP_129S1SvImJ_G0031801.1 mouse_genomes_project 7 17961352 17966040 - Pvr protein_coding retained_intron MGP_129S1SvImJ_T0082088.1 MGP_129S1SvImJ_G0031801.1 mouse_genomes_project 7 17970844 17976301 - Pvr protein_coding retained_intron MGP_129S1SvImJ_T0082089.1 MGP_129S1SvImJ_G0031801.1 mouse_genomes_project 7 17972343 17976301 - Pvr protein_coding retained_intron MGP_129S1SvImJ_T0086748.1 MGP_129S1SvImJ_G0033028.1 mouse_genomes_project 7 131581709 131592329 + MGP_129S1SvImJ_P0086748 Zfp771 protein_coding protein_coding MGP_129S1SvImJ_T0086749.1 MGP_129S1SvImJ_G0033028.1 mouse_genomes_project 7 131582910 131583521 + Zfp771 protein_coding processed_transcript MGP_129S1SvImJ_T0086750.1 MGP_129S1SvImJ_G0033028.1 mouse_genomes_project 7 131582996 131591398 + MGP_129S1SvImJ_P0086750 Zfp771 protein_coding protein_coding MGP_129S1SvImJ_T0083882.1 MGP_129S1SvImJ_G0032243.1 mouse_genomes_project 7 46024009 46031548 + MGP_129S1SvImJ_P0083882 Rpl18 protein_coding protein_coding MGP_129S1SvImJ_T0083883.1 MGP_129S1SvImJ_G0032243.1 mouse_genomes_project 7 46026603 46031549 + MGP_129S1SvImJ_P0083883 Rpl18 protein_coding protein_coding MGP_129S1SvImJ_T0083884.1 MGP_129S1SvImJ_G0032243.1 mouse_genomes_project 7 46026669 46031549 + MGP_129S1SvImJ_P0083884 Rpl18 protein_coding protein_coding MGP_129S1SvImJ_T0083885.1 MGP_129S1SvImJ_G0032243.1 mouse_genomes_project 7 46027684 46030838 + Rpl18 protein_coding retained_intron MGP_129S1SvImJ_T0083886.1 MGP_129S1SvImJ_G0032243.1 mouse_genomes_project 7 46027741 46031070 + MGP_129S1SvImJ_P0083886 Rpl18 protein_coding protein_coding MGP_129S1SvImJ_T0083887.1 MGP_129S1SvImJ_G0032243.1 mouse_genomes_project 7 46027794 46031499 + Rpl18 protein_coding retained_intron MGP_129S1SvImJ_T0083888.1 MGP_129S1SvImJ_G0032243.1 mouse_genomes_project 7 46030308 46031541 + MGP_129S1SvImJ_P0083888 Rpl18 protein_coding protein_coding MGP_129S1SvImJ_T0083889.1 MGP_129S1SvImJ_G0032243.1 mouse_genomes_project 7 46030333 46031544 + MGP_129S1SvImJ_P0083889 Rpl18 protein_coding protein_coding MGP_129S1SvImJ_T0083890.1 MGP_129S1SvImJ_G0032243.1 mouse_genomes_project 7 46030867 46031544 + Rpl18 protein_coding retained_intron MGP_129S1SvImJ_T0082528.1 MGP_129S1SvImJ_G0031917.1 mouse_genomes_project 7 26217466 26254812 + MGP_129S1SvImJ_P0082528 2310022A10Rik protein_coding protein_coding MGP_129S1SvImJ_T0082529.1 MGP_129S1SvImJ_G0031917.1 mouse_genomes_project 7 26217500 26247426 + MGP_129S1SvImJ_P0082529 2310022A10Rik protein_coding protein_coding MGP_129S1SvImJ_T0082530.1 MGP_129S1SvImJ_G0031917.1 mouse_genomes_project 7 26217503 26218305 + 2310022A10Rik protein_coding processed_transcript MGP_129S1SvImJ_T0082531.1 MGP_129S1SvImJ_G0031917.1 mouse_genomes_project 7 26217519 26254812 + MGP_129S1SvImJ_P0082531 2310022A10Rik protein_coding protein_coding MGP_129S1SvImJ_T0082532.1 MGP_129S1SvImJ_G0031917.1 mouse_genomes_project 7 26224698 26254807 + MGP_129S1SvImJ_P0082532 2310022A10Rik protein_coding protein_coding MGP_129S1SvImJ_T0082533.1 MGP_129S1SvImJ_G0031917.1 mouse_genomes_project 7 26224719 26246035 + 2310022A10Rik protein_coding retained_intron MGP_129S1SvImJ_T0082534.1 MGP_129S1SvImJ_G0031917.1 mouse_genomes_project 7 26233061 26253347 + MGP_129S1SvImJ_P0082534 2310022A10Rik protein_coding protein_coding MGP_129S1SvImJ_T0082535.1 MGP_129S1SvImJ_G0031917.1 mouse_genomes_project 7 26247174 26253133 + 2310022A10Rik protein_coding processed_transcript MGP_129S1SvImJ_T0100087.1 MGP_129S1SvImJ_G0038154.1 mouse_genomes_project 7 126347071 126347178 + Gm23614 snRNA snRNA MGP_129S1SvImJ_T0015828.1 MGP_129S1SvImJ_G0013917.1 mouse_genomes_project 7 62579001 62579460 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102754.1 MGP_129S1SvImJ_G0040586.1 mouse_genomes_project 7 48133290 48134004 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0084196.1 MGP_129S1SvImJ_G0032327.1 mouse_genomes_project 7 63459294 63463956 + MGP_129S1SvImJ_P0084196 Magel2 protein_coding protein_coding MGP_129S1SvImJ_T0005212.1 MGP_129S1SvImJ_G0004439.1 mouse_genomes_project 7 30220438 30230102 + Gm10640 antisense antisense MGP_129S1SvImJ_T0005213.1 MGP_129S1SvImJ_G0004439.1 mouse_genomes_project 7 30228897 30237081 + Gm10640 antisense antisense MGP_129S1SvImJ_T0015696.1 MGP_129S1SvImJ_G0013785.1 mouse_genomes_project 7 893495 894327 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082362.1 MGP_129S1SvImJ_G0031875.1 mouse_genomes_project 7 24188591 24194369 + MGP_129S1SvImJ_P0082362 B9d2 protein_coding protein_coding MGP_129S1SvImJ_T0082363.1 MGP_129S1SvImJ_G0031875.1 mouse_genomes_project 7 24188649 24191460 + MGP_129S1SvImJ_P0082363 B9d2 protein_coding protein_coding MGP_129S1SvImJ_T0082364.1 MGP_129S1SvImJ_G0031875.1 mouse_genomes_project 7 24188667 24191231 + MGP_129S1SvImJ_P0082364 B9d2 protein_coding protein_coding MGP_129S1SvImJ_T0082365.1 MGP_129S1SvImJ_G0031875.1 mouse_genomes_project 7 24188969 24194369 + MGP_129S1SvImJ_P0082365 B9d2 protein_coding protein_coding MGP_129S1SvImJ_T0086345.1 MGP_129S1SvImJ_G0032961.1 mouse_genomes_project 7 127422787 127514769 - MGP_129S1SvImJ_P0086345 Arhgap17 protein_coding protein_coding MGP_129S1SvImJ_T0086346.1 MGP_129S1SvImJ_G0032961.1 mouse_genomes_project 7 127422840 127514804 - MGP_129S1SvImJ_P0086346 Arhgap17 protein_coding protein_coding MGP_129S1SvImJ_T0086347.1 MGP_129S1SvImJ_G0032961.1 mouse_genomes_project 7 127422840 127514804 - MGP_129S1SvImJ_P0086347 Arhgap17 protein_coding protein_coding MGP_129S1SvImJ_T0086348.1 MGP_129S1SvImJ_G0032961.1 mouse_genomes_project 7 127422844 127514796 - MGP_129S1SvImJ_P0086348 Arhgap17 protein_coding protein_coding MGP_129S1SvImJ_T0086349.1 MGP_129S1SvImJ_G0032961.1 mouse_genomes_project 7 127422849 127514821 - MGP_129S1SvImJ_P0086349 Arhgap17 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086350.1 MGP_129S1SvImJ_G0032961.1 mouse_genomes_project 7 127422954 127514803 - MGP_129S1SvImJ_P0086350 Arhgap17 protein_coding protein_coding MGP_129S1SvImJ_T0086351.1 MGP_129S1SvImJ_G0032961.1 mouse_genomes_project 7 127426506 127429811 - Arhgap17 protein_coding retained_intron MGP_129S1SvImJ_T0086352.1 MGP_129S1SvImJ_G0032961.1 mouse_genomes_project 7 127430555 127440160 - Arhgap17 protein_coding retained_intron MGP_129S1SvImJ_T0086353.1 MGP_129S1SvImJ_G0032961.1 mouse_genomes_project 7 127438848 127514833 - Arhgap17 protein_coding retained_intron MGP_129S1SvImJ_T0086354.1 MGP_129S1SvImJ_G0032961.1 mouse_genomes_project 7 127466705 127514833 - MGP_129S1SvImJ_P0086354 Arhgap17 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086355.1 MGP_129S1SvImJ_G0032961.1 mouse_genomes_project 7 127513694 127514794 - Arhgap17 protein_coding retained_intron MGP_129S1SvImJ_T0011720.1 MGP_129S1SvImJ_G0009836.1 mouse_genomes_project 7 147838806 147838876 + Gm27786 misc_RNA misc_RNA MGP_129S1SvImJ_T0082149.1 MGP_129S1SvImJ_G0031824.1 mouse_genomes_project 7 22646520 22647375 - MGP_129S1SvImJ_P0082149 Tescl protein_coding protein_coding MGP_129S1SvImJ_T0085139.1 MGP_129S1SvImJ_G0032549.1 mouse_genomes_project 7 102173503 102261233 + MGP_129S1SvImJ_P0085139 Gdpd5 protein_coding protein_coding MGP_129S1SvImJ_T0085140.1 MGP_129S1SvImJ_G0032549.1 mouse_genomes_project 7 102173535 102261243 + MGP_129S1SvImJ_P0085140 Gdpd5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0011713.1 MGP_129S1SvImJ_G0009829.1 mouse_genomes_project 7 106370321 106370642 + Gm23973 misc_RNA misc_RNA MGP_129S1SvImJ_T0015757.1 MGP_129S1SvImJ_G0013846.1 mouse_genomes_project 7 24308738 24309354 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085236.1 MGP_129S1SvImJ_G0032574.1 mouse_genomes_project 7 103499030 103537372 + MGP_129S1SvImJ_P0085236 Rab6a protein_coding protein_coding MGP_129S1SvImJ_T0085237.1 MGP_129S1SvImJ_G0032574.1 mouse_genomes_project 7 103499207 103537372 + MGP_129S1SvImJ_P0085237 Rab6a protein_coding protein_coding MGP_129S1SvImJ_T0085238.1 MGP_129S1SvImJ_G0032574.1 mouse_genomes_project 7 103499311 103537372 + MGP_129S1SvImJ_P0085238 Rab6a protein_coding protein_coding MGP_129S1SvImJ_T0085239.1 MGP_129S1SvImJ_G0032574.1 mouse_genomes_project 7 103529262 103535471 + Rab6a protein_coding retained_intron MGP_129S1SvImJ_T0015771.1 MGP_129S1SvImJ_G0013860.1 mouse_genomes_project 7 32977078 32977805 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082076.1 MGP_129S1SvImJ_G0031797.1 mouse_genomes_project 7 17859524 17862185 - MGP_129S1SvImJ_P0082076 Bcl3 protein_coding protein_coding MGP_129S1SvImJ_T0082077.1 MGP_129S1SvImJ_G0031797.1 mouse_genomes_project 7 17859524 17873918 - MGP_129S1SvImJ_P0082077 Bcl3 protein_coding protein_coding MGP_129S1SvImJ_T0082078.1 MGP_129S1SvImJ_G0031797.1 mouse_genomes_project 7 17862180 17862953 - Bcl3 protein_coding retained_intron MGP_129S1SvImJ_T0082079.1 MGP_129S1SvImJ_G0031797.1 mouse_genomes_project 7 17862412 17863897 - Bcl3 protein_coding retained_intron MGP_129S1SvImJ_T0082080.1 MGP_129S1SvImJ_G0031797.1 mouse_genomes_project 7 17862558 17867183 - Bcl3 protein_coding processed_transcript MGP_129S1SvImJ_T0082081.1 MGP_129S1SvImJ_G0031797.1 mouse_genomes_project 7 17862649 17873305 - MGP_129S1SvImJ_P0082081 Bcl3 protein_coding protein_coding MGP_129S1SvImJ_T0082082.1 MGP_129S1SvImJ_G0031797.1 mouse_genomes_project 7 17863458 17873918 - Bcl3 protein_coding processed_transcript MGP_129S1SvImJ_T0081835.1 MGP_129S1SvImJ_G0031722.1 mouse_genomes_project 7 14673558 14677970 + MGP_129S1SvImJ_P0081835 Ptgir protein_coding protein_coding MGP_129S1SvImJ_T0081836.1 MGP_129S1SvImJ_G0031722.1 mouse_genomes_project 7 14673582 14677965 + MGP_129S1SvImJ_P0081836 Ptgir protein_coding protein_coding MGP_129S1SvImJ_T0082278.1 MGP_129S1SvImJ_G0031855.1 mouse_genomes_project 7 23648979 23672252 - Dedd2 protein_coding processed_transcript MGP_129S1SvImJ_T0082279.1 MGP_129S1SvImJ_G0031855.1 mouse_genomes_project 7 23651904 23672252 - MGP_129S1SvImJ_P0082279 Dedd2 protein_coding protein_coding MGP_129S1SvImJ_T0082280.1 MGP_129S1SvImJ_G0031855.1 mouse_genomes_project 7 23651905 23673008 - MGP_129S1SvImJ_P0082280 Dedd2 protein_coding protein_coding MGP_129S1SvImJ_T0082281.1 MGP_129S1SvImJ_G0031855.1 mouse_genomes_project 7 23669485 23672264 - Dedd2 protein_coding retained_intron MGP_129S1SvImJ_T0082064.1 MGP_129S1SvImJ_G0031795.1 mouse_genomes_project 7 17806251 17821501 - MGP_129S1SvImJ_P0082064 Bcam protein_coding protein_coding MGP_129S1SvImJ_T0082065.1 MGP_129S1SvImJ_G0031795.1 mouse_genomes_project 7 17806680 17807075 - Bcam protein_coding retained_intron MGP_129S1SvImJ_T0082066.1 MGP_129S1SvImJ_G0031795.1 mouse_genomes_project 7 17813418 17821449 - Bcam protein_coding retained_intron MGP_129S1SvImJ_T0082067.1 MGP_129S1SvImJ_G0031795.1 mouse_genomes_project 7 17816532 17821970 - MGP_129S1SvImJ_P0082067 Bcam protein_coding protein_coding MGP_129S1SvImJ_T0082068.1 MGP_129S1SvImJ_G0031795.1 mouse_genomes_project 7 17817912 17821449 - MGP_129S1SvImJ_P0082068 Bcam protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0015872.1 MGP_129S1SvImJ_G0013961.1 mouse_genomes_project 7 98088873 98090321 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010950.1 MGP_129S1SvImJ_G0009066.1 mouse_genomes_project 7 144851257 144851364 + Mir6401 miRNA miRNA MGP_129S1SvImJ_T0083492.1 MGP_129S1SvImJ_G0032139.1 mouse_genomes_project 7 43809432 43814121 + MGP_129S1SvImJ_P0083492 Klk12 protein_coding protein_coding MGP_129S1SvImJ_T0083493.1 MGP_129S1SvImJ_G0032139.1 mouse_genomes_project 7 43809635 43814011 + MGP_129S1SvImJ_P0083493 Klk12 protein_coding protein_coding MGP_129S1SvImJ_T0087508.1 MGP_129S1SvImJ_G0033216.1 mouse_genomes_project 7 146386185 146390223 - MGP_129S1SvImJ_P0087508 Lmntd2 protein_coding protein_coding MGP_129S1SvImJ_T0087509.1 MGP_129S1SvImJ_G0033216.1 mouse_genomes_project 7 146386185 146390225 - MGP_129S1SvImJ_P0087509 Lmntd2 protein_coding protein_coding MGP_129S1SvImJ_T0082091.1 MGP_129S1SvImJ_G0031803.1 mouse_genomes_project 7 18019614 18020409 + MGP_129S1SvImJ_P0082091 protein_coding protein_coding MGP_129S1SvImJ_T0082314.1 MGP_129S1SvImJ_G0031863.1 mouse_genomes_project 7 23772956 23831362 + MGP_129S1SvImJ_P0082314 Megf8 protein_coding protein_coding MGP_129S1SvImJ_T0082315.1 MGP_129S1SvImJ_G0031863.1 mouse_genomes_project 7 23811422 23831359 + Megf8 protein_coding retained_intron MGP_129S1SvImJ_T0010924.1 MGP_129S1SvImJ_G0009040.1 mouse_genomes_project 7 81867722 81867821 + Gm24541 miRNA miRNA MGP_129S1SvImJ_T0083862.1 MGP_129S1SvImJ_G0032236.1 mouse_genomes_project 7 45941937 45947744 + Mamstr protein_coding retained_intron MGP_129S1SvImJ_T0083863.1 MGP_129S1SvImJ_G0032236.1 mouse_genomes_project 7 45941937 45942960 + Mamstr protein_coding retained_intron MGP_129S1SvImJ_T0083864.1 MGP_129S1SvImJ_G0032236.1 mouse_genomes_project 7 45941953 45947186 + MGP_129S1SvImJ_P0083864 Mamstr protein_coding protein_coding MGP_129S1SvImJ_T0083865.1 MGP_129S1SvImJ_G0032236.1 mouse_genomes_project 7 45943449 45948496 + Mamstr protein_coding retained_intron MGP_129S1SvImJ_T0083866.1 MGP_129S1SvImJ_G0032236.1 mouse_genomes_project 7 45943745 45947716 + Mamstr protein_coding retained_intron MGP_129S1SvImJ_T0083867.1 MGP_129S1SvImJ_G0032236.1 mouse_genomes_project 7 45946358 45946984 + MGP_129S1SvImJ_P0083867 Mamstr protein_coding protein_coding MGP_129S1SvImJ_T0015706.1 MGP_129S1SvImJ_G0013795.1 mouse_genomes_project 7 1529824 1530577 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018453.1 MGP_129S1SvImJ_G0015692.1 mouse_genomes_project 7 131797868 131806259 + B130055M24Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0008938.1 MGP_129S1SvImJ_G0007218.1 mouse_genomes_project 7 77444057 77447066 - AU020206 lincRNA lincRNA MGP_129S1SvImJ_T0008939.1 MGP_129S1SvImJ_G0007218.1 mouse_genomes_project 7 77444781 77457500 - AU020206 lincRNA lincRNA MGP_129S1SvImJ_T0081723.1 MGP_129S1SvImJ_G0031696.1 mouse_genomes_project 7 13617004 13644732 - MGP_129S1SvImJ_P0081723 Gltscr1 protein_coding protein_coding MGP_129S1SvImJ_T0081438.1 MGP_129S1SvImJ_G0031565.1 mouse_genomes_project 7 1774831 1785455 - MGP_129S1SvImJ_P0081438 Shisa7 protein_coding protein_coding MGP_129S1SvImJ_T0081439.1 MGP_129S1SvImJ_G0031565.1 mouse_genomes_project 7 1774832 1795031 - MGP_129S1SvImJ_P0081439 Shisa7 protein_coding protein_coding MGP_129S1SvImJ_T0081440.1 MGP_129S1SvImJ_G0031565.1 mouse_genomes_project 7 1777307 1795031 - MGP_129S1SvImJ_P0081440 Shisa7 protein_coding protein_coding MGP_129S1SvImJ_T0081441.1 MGP_129S1SvImJ_G0031565.1 mouse_genomes_project 7 1779457 1780425 - Shisa7 protein_coding retained_intron MGP_129S1SvImJ_T0081442.1 MGP_129S1SvImJ_G0031565.1 mouse_genomes_project 7 1780688 1783796 - Shisa7 protein_coding retained_intron MGP_129S1SvImJ_T0084867.1 MGP_129S1SvImJ_G0032471.1 mouse_genomes_project 7 88560055 88568221 - MGP_129S1SvImJ_P0084867 Olfr309 protein_coding protein_coding MGP_129S1SvImJ_T0084868.1 MGP_129S1SvImJ_G0032471.1 mouse_genomes_project 7 88560055 88560982 - MGP_129S1SvImJ_P0084868 Olfr309 protein_coding protein_coding MGP_129S1SvImJ_T0086657.1 MGP_129S1SvImJ_G0033009.1 mouse_genomes_project 7 131255898 131260857 - MGP_129S1SvImJ_P0086657 protein_coding protein_coding MGP_129S1SvImJ_T0086658.1 MGP_129S1SvImJ_G0033009.1 mouse_genomes_project 7 131257686 131261280 - MGP_129S1SvImJ_P0086658 protein_coding protein_coding MGP_129S1SvImJ_T0086659.1 MGP_129S1SvImJ_G0033009.1 mouse_genomes_project 7 131257705 131261279 - MGP_129S1SvImJ_P0086659 protein_coding protein_coding MGP_129S1SvImJ_T0082204.1 MGP_129S1SvImJ_G0031839.1 mouse_genomes_project 7 23006293 23010337 - MGP_129S1SvImJ_P0082204 Tex101 protein_coding protein_coding MGP_129S1SvImJ_T0085285.1 MGP_129S1SvImJ_G0032583.1 mouse_genomes_project 7 104278821 104311994 + MGP_129S1SvImJ_P0085285 Stard10 protein_coding protein_coding MGP_129S1SvImJ_T0085286.1 MGP_129S1SvImJ_G0032583.1 mouse_genomes_project 7 104284936 104311505 + MGP_129S1SvImJ_P0085286 Stard10 protein_coding protein_coding MGP_129S1SvImJ_T0085287.1 MGP_129S1SvImJ_G0032583.1 mouse_genomes_project 7 104285205 104308655 + MGP_129S1SvImJ_P0085287 Stard10 protein_coding protein_coding MGP_129S1SvImJ_T0085288.1 MGP_129S1SvImJ_G0032583.1 mouse_genomes_project 7 104285430 104311557 + MGP_129S1SvImJ_P0085288 Stard10 protein_coding protein_coding MGP_129S1SvImJ_T0085289.1 MGP_129S1SvImJ_G0032583.1 mouse_genomes_project 7 104285502 104311676 + MGP_129S1SvImJ_P0085289 Stard10 protein_coding protein_coding MGP_129S1SvImJ_T0085290.1 MGP_129S1SvImJ_G0032583.1 mouse_genomes_project 7 104285687 104309700 + MGP_129S1SvImJ_P0085290 Stard10 protein_coding protein_coding MGP_129S1SvImJ_T0085291.1 MGP_129S1SvImJ_G0032583.1 mouse_genomes_project 7 104307877 104311505 + MGP_129S1SvImJ_P0085291 Stard10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083869.1 MGP_129S1SvImJ_G0032238.1 mouse_genomes_project 7 45982023 45998772 - MGP_129S1SvImJ_P0083869 Sec1 protein_coding protein_coding MGP_129S1SvImJ_T0015818.1 MGP_129S1SvImJ_G0013907.1 mouse_genomes_project 7 56440602 56440960 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0086906.1 MGP_129S1SvImJ_G0033060.1 mouse_genomes_project 7 132269042 132275551 - MGP_129S1SvImJ_P0086906 Prss53 protein_coding protein_coding MGP_129S1SvImJ_T0086907.1 MGP_129S1SvImJ_G0033060.1 mouse_genomes_project 7 132269294 132275548 - MGP_129S1SvImJ_P0086907 Prss53 protein_coding protein_coding MGP_129S1SvImJ_T0010908.1 MGP_129S1SvImJ_G0009024.1 mouse_genomes_project 7 62843349 62843412 - Mir344b miRNA miRNA MGP_129S1SvImJ_T0086193.1 MGP_129S1SvImJ_G0032925.1 mouse_genomes_project 7 124128979 124139427 + MGP_129S1SvImJ_P0086193 Anks4b protein_coding protein_coding MGP_129S1SvImJ_T0008826.1 MGP_129S1SvImJ_G0007130.1 mouse_genomes_project 7 24068858 24071811 - lincRNA lincRNA MGP_129S1SvImJ_T0008924.1 MGP_129S1SvImJ_G0007207.1 mouse_genomes_project 7 74738920 74773139 - Gm30075 lincRNA lincRNA MGP_129S1SvImJ_T0002326.1 MGP_129S1SvImJ_G0002237.1 mouse_genomes_project 7 129264672 129267139 - TEC TEC MGP_129S1SvImJ_T0101332.1 MGP_129S1SvImJ_G0039399.1 mouse_genomes_project 7 95708678 95708804 - Gm25860 snoRNA snoRNA MGP_129S1SvImJ_T0083942.1 MGP_129S1SvImJ_G0032257.1 mouse_genomes_project 7 46304826 46370171 - MGP_129S1SvImJ_P0083942 Abcc6 protein_coding protein_coding MGP_129S1SvImJ_T0083943.1 MGP_129S1SvImJ_G0032257.1 mouse_genomes_project 7 46305332 46306123 - Abcc6 protein_coding retained_intron MGP_129S1SvImJ_T0083944.1 MGP_129S1SvImJ_G0032257.1 mouse_genomes_project 7 46328545 46332975 - Abcc6 protein_coding retained_intron MGP_129S1SvImJ_T0002251.1 MGP_129S1SvImJ_G0002163.1 mouse_genomes_project 7 50110641 50112632 + TEC TEC MGP_129S1SvImJ_T0101768.1 MGP_129S1SvImJ_G0039749.1 mouse_genomes_project 7 109032922 109143672 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0002340.1 MGP_129S1SvImJ_G0002251.1 mouse_genomes_project 7 133157667 133158657 - TEC TEC MGP_129S1SvImJ_T0086301.1 MGP_129S1SvImJ_G0032954.1 mouse_genomes_project 7 126246300 126262584 - MGP_129S1SvImJ_P0086301 Ern2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086302.1 MGP_129S1SvImJ_G0032954.1 mouse_genomes_project 7 126246345 126262581 - MGP_129S1SvImJ_P0086302 Ern2 protein_coding protein_coding MGP_129S1SvImJ_T0086303.1 MGP_129S1SvImJ_G0032954.1 mouse_genomes_project 7 126246465 126260332 - MGP_129S1SvImJ_P0086303 Ern2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0085499.1 MGP_129S1SvImJ_G0032668.1 mouse_genomes_project 7 106717063 106717699 + MGP_129S1SvImJ_P0085499 protein_coding protein_coding MGP_129S1SvImJ_T0081841.1 MGP_129S1SvImJ_G0031724.1 mouse_genomes_project 7 14716801 14720966 + MGP_129S1SvImJ_P0081841 Pnmal2 protein_coding protein_coding MGP_129S1SvImJ_T0005251.1 MGP_129S1SvImJ_G0004466.1 mouse_genomes_project 7 80866910 80903593 - Gm26633 antisense antisense MGP_129S1SvImJ_T0085794.1 MGP_129S1SvImJ_G0032836.1 mouse_genomes_project 7 112334635 112343170 + MGP_129S1SvImJ_P0085794 Eif3f protein_coding protein_coding MGP_129S1SvImJ_T0085795.1 MGP_129S1SvImJ_G0032836.1 mouse_genomes_project 7 112338613 112340695 + Eif3f protein_coding retained_intron MGP_129S1SvImJ_T0085796.1 MGP_129S1SvImJ_G0032836.1 mouse_genomes_project 7 112340526 112341227 + Eif3f protein_coding retained_intron MGP_129S1SvImJ_T0081428.1 MGP_129S1SvImJ_G0031563.1 mouse_genomes_project 7 1732695 1734884 + MGP_129S1SvImJ_P0081428 Rpl28 protein_coding protein_coding MGP_129S1SvImJ_T0081429.1 MGP_129S1SvImJ_G0031563.1 mouse_genomes_project 7 1732811 1734344 + MGP_129S1SvImJ_P0081429 Rpl28 protein_coding protein_coding MGP_129S1SvImJ_T0081430.1 MGP_129S1SvImJ_G0031563.1 mouse_genomes_project 7 1733216 1733644 + Rpl28 protein_coding retained_intron MGP_129S1SvImJ_T0081431.1 MGP_129S1SvImJ_G0031563.1 mouse_genomes_project 7 1733412 1734380 + MGP_129S1SvImJ_P0081431 Rpl28 protein_coding protein_coding MGP_129S1SvImJ_T0081432.1 MGP_129S1SvImJ_G0031563.1 mouse_genomes_project 7 1733669 1734380 + Rpl28 protein_coding retained_intron MGP_129S1SvImJ_T0102696.1 MGP_129S1SvImJ_G0040529.1 mouse_genomes_project 7 11131460 11138415 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085775.1 MGP_129S1SvImJ_G0032818.1 mouse_genomes_project 7 111800679 111801581 + MGP_129S1SvImJ_P0085775 protein_coding protein_coding MGP_129S1SvImJ_T0008902.1 MGP_129S1SvImJ_G0007190.1 mouse_genomes_project 7 69583551 69675859 + lincRNA lincRNA MGP_129S1SvImJ_T0008903.1 MGP_129S1SvImJ_G0007190.1 mouse_genomes_project 7 69587252 69666407 + lincRNA lincRNA MGP_129S1SvImJ_T0008904.1 MGP_129S1SvImJ_G0007190.1 mouse_genomes_project 7 69611057 69675857 + lincRNA lincRNA MGP_129S1SvImJ_T0008905.1 MGP_129S1SvImJ_G0007190.1 mouse_genomes_project 7 69643108 69666486 + lincRNA lincRNA MGP_129S1SvImJ_T0081484.1 MGP_129S1SvImJ_G0031589.1 mouse_genomes_project 7 2189197 2190032 - MGP_129S1SvImJ_P0081484 protein_coding protein_coding MGP_129S1SvImJ_T0081264.1 MGP_129S1SvImJ_G0031531.1 mouse_genomes_project 7 643470 655545 - protein_coding retained_intron MGP_129S1SvImJ_T0081265.1 MGP_129S1SvImJ_G0031531.1 mouse_genomes_project 7 643475 655536 - protein_coding retained_intron MGP_129S1SvImJ_T0081266.1 MGP_129S1SvImJ_G0031531.1 mouse_genomes_project 7 643475 655516 - protein_coding retained_intron MGP_129S1SvImJ_T0081267.1 MGP_129S1SvImJ_G0031531.1 mouse_genomes_project 7 645197 655510 - protein_coding retained_intron MGP_129S1SvImJ_T0084195.1 MGP_129S1SvImJ_G0032326.1 mouse_genomes_project 7 63428965 63430617 + MGP_129S1SvImJ_P0084195 Ndn protein_coding protein_coding MGP_129S1SvImJ_T0102687.1 MGP_129S1SvImJ_G0040520.1 mouse_genomes_project 7 9500825 9502103 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085436.1 MGP_129S1SvImJ_G0032610.1 mouse_genomes_project 7 105543897 105548844 - MGP_129S1SvImJ_P0085436 Olfr545 protein_coding protein_coding MGP_129S1SvImJ_T0081854.1 MGP_129S1SvImJ_G0031728.1 mouse_genomes_project 7 14809319 14844258 - MGP_129S1SvImJ_P0081854 Hif3a protein_coding protein_coding MGP_129S1SvImJ_T0081855.1 MGP_129S1SvImJ_G0031728.1 mouse_genomes_project 7 14813540 14838377 - MGP_129S1SvImJ_P0081855 Hif3a protein_coding protein_coding MGP_129S1SvImJ_T0081856.1 MGP_129S1SvImJ_G0031728.1 mouse_genomes_project 7 14826389 14829323 - MGP_129S1SvImJ_P0081856 Hif3a protein_coding protein_coding MGP_129S1SvImJ_T0081857.1 MGP_129S1SvImJ_G0031728.1 mouse_genomes_project 7 14830662 14844215 - MGP_129S1SvImJ_P0081857 Hif3a protein_coding protein_coding MGP_129S1SvImJ_T0085372.1 MGP_129S1SvImJ_G0032595.1 mouse_genomes_project 7 104992698 105041120 + MGP_129S1SvImJ_P0085372 Numa1 protein_coding protein_coding MGP_129S1SvImJ_T0085373.1 MGP_129S1SvImJ_G0032595.1 mouse_genomes_project 7 104994916 105041123 + MGP_129S1SvImJ_P0085373 Numa1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0085374.1 MGP_129S1SvImJ_G0032595.1 mouse_genomes_project 7 105026437 105041116 + MGP_129S1SvImJ_P0085374 Numa1 protein_coding protein_coding MGP_129S1SvImJ_T0086362.1 MGP_129S1SvImJ_G0032963.1 mouse_genomes_project 7 127608679 127614393 + MGP_129S1SvImJ_P0086362 Aqp8 protein_coding protein_coding MGP_129S1SvImJ_T0086363.1 MGP_129S1SvImJ_G0032963.1 mouse_genomes_project 7 127608700 127614375 + MGP_129S1SvImJ_P0086363 Aqp8 protein_coding protein_coding MGP_129S1SvImJ_T0086364.1 MGP_129S1SvImJ_G0032963.1 mouse_genomes_project 7 127610139 127614387 + Aqp8 protein_coding processed_transcript MGP_129S1SvImJ_T0085761.1 MGP_129S1SvImJ_G0032804.1 mouse_genomes_project 7 111322009 111322942 + MGP_129S1SvImJ_P0085761 Olfr474 protein_coding protein_coding MGP_129S1SvImJ_T0018412.1 MGP_129S1SvImJ_G0015674.1 mouse_genomes_project 7 71795522 71845151 + processed_transcript antisense MGP_129S1SvImJ_T0018413.1 MGP_129S1SvImJ_G0015674.1 mouse_genomes_project 7 71820076 71836493 + processed_transcript antisense MGP_129S1SvImJ_T0018414.1 MGP_129S1SvImJ_G0015674.1 mouse_genomes_project 7 71820076 71845155 + processed_transcript retained_intron MGP_129S1SvImJ_T0018415.1 MGP_129S1SvImJ_G0015674.1 mouse_genomes_project 7 71822294 71822832 + processed_transcript processed_transcript MGP_129S1SvImJ_T0005176.1 MGP_129S1SvImJ_G0004412.1 mouse_genomes_project 7 16933973 16941704 - Mypopos antisense antisense MGP_129S1SvImJ_T0005177.1 MGP_129S1SvImJ_G0004412.1 mouse_genomes_project 7 16934292 16941731 - Mypopos antisense antisense MGP_129S1SvImJ_T0005178.1 MGP_129S1SvImJ_G0004412.1 mouse_genomes_project 7 16935484 16937835 - Mypopos antisense antisense MGP_129S1SvImJ_T0005179.1 MGP_129S1SvImJ_G0004412.1 mouse_genomes_project 7 16937835 16941715 - Mypopos antisense antisense MGP_129S1SvImJ_T0005171.1 MGP_129S1SvImJ_G0004409.1 mouse_genomes_project 7 14336128 14354849 + Gm29443 antisense antisense MGP_129S1SvImJ_T0005172.1 MGP_129S1SvImJ_G0004409.1 mouse_genomes_project 7 14336345 14354948 + Gm29443 antisense antisense MGP_129S1SvImJ_T0008869.1 MGP_129S1SvImJ_G0007165.1 mouse_genomes_project 7 40526595 40535842 + Gm28307 lincRNA lincRNA MGP_129S1SvImJ_T0010937.1 MGP_129S1SvImJ_G0009053.1 mouse_genomes_project 7 118875405 118875485 + Gm27684 miRNA miRNA MGP_129S1SvImJ_T0102680.1 MGP_129S1SvImJ_G0040513.1 mouse_genomes_project 7 9346771 9347611 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0008851.1 MGP_129S1SvImJ_G0007154.1 mouse_genomes_project 7 36629538 36630694 + Gm28075 lincRNA lincRNA MGP_129S1SvImJ_T0015867.1 MGP_129S1SvImJ_G0013956.1 mouse_genomes_project 7 90959485 90960465 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005337.1 MGP_129S1SvImJ_G0004526.1 mouse_genomes_project 7 148609711 148617587 - antisense antisense MGP_129S1SvImJ_T0002283.1 MGP_129S1SvImJ_G0002194.1 mouse_genomes_project 7 77146893 77148289 + TEC TEC MGP_129S1SvImJ_T0085998.1 MGP_129S1SvImJ_G0032885.1 mouse_genomes_project 7 118397893 118402647 + MGP_129S1SvImJ_P0085998 Calcb protein_coding protein_coding MGP_129S1SvImJ_T0085999.1 MGP_129S1SvImJ_G0032885.1 mouse_genomes_project 7 118397925 118402345 + MGP_129S1SvImJ_P0085999 Calcb protein_coding protein_coding MGP_129S1SvImJ_T0086000.1 MGP_129S1SvImJ_G0032885.1 mouse_genomes_project 7 118398761 118399390 + MGP_129S1SvImJ_P0086000 Calcb protein_coding protein_coding MGP_129S1SvImJ_T0082550.1 MGP_129S1SvImJ_G0031919.1 mouse_genomes_project 7 26337927 26341349 + MGP_129S1SvImJ_P0082550 Ttc9b protein_coding protein_coding MGP_129S1SvImJ_T0010881.1 MGP_129S1SvImJ_G0008997.1 mouse_genomes_project 7 34431207 34431277 + Gm25033 miRNA miRNA MGP_129S1SvImJ_T0002256.1 MGP_129S1SvImJ_G0002168.1 mouse_genomes_project 7 55890492 55891910 + TEC TEC MGP_129S1SvImJ_T0085581.1 MGP_129S1SvImJ_G0032720.1 mouse_genomes_project 7 107710929 107711975 + MGP_129S1SvImJ_P0085581 Olfr653 protein_coding protein_coding MGP_129S1SvImJ_T0008810.1 MGP_129S1SvImJ_G0007117.1 mouse_genomes_project 7 10346931 10359945 - 1810019N24Rik lincRNA lincRNA MGP_129S1SvImJ_T0008811.1 MGP_129S1SvImJ_G0007117.1 mouse_genomes_project 7 10348029 10348406 - 1810019N24Rik lincRNA lincRNA MGP_129S1SvImJ_T0008953.1 MGP_129S1SvImJ_G0007225.1 mouse_genomes_project 7 81480379 81486207 - Gm45169 lincRNA lincRNA MGP_129S1SvImJ_T0084101.1 MGP_129S1SvImJ_G0032308.1 mouse_genomes_project 7 52762632 52772452 - MGP_129S1SvImJ_P0084101 Svip protein_coding protein_coding MGP_129S1SvImJ_T0101324.1 MGP_129S1SvImJ_G0039391.1 mouse_genomes_project 7 60779759 60779829 - Snord107 snoRNA snoRNA MGP_129S1SvImJ_T0085525.1 MGP_129S1SvImJ_G0032692.1 mouse_genomes_project 7 107169443 107170382 + MGP_129S1SvImJ_P0085525 Olfr633 protein_coding protein_coding MGP_129S1SvImJ_T0084924.1 MGP_129S1SvImJ_G0032499.1 mouse_genomes_project 7 92250875 92291177 - MGP_129S1SvImJ_P0084924 Ccdc81 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084925.1 MGP_129S1SvImJ_G0032499.1 mouse_genomes_project 7 92251116 92291166 - MGP_129S1SvImJ_P0084925 Ccdc81 protein_coding protein_coding MGP_129S1SvImJ_T0086926.1 MGP_129S1SvImJ_G0033066.1 mouse_genomes_project 7 132323759 132326680 - MGP_129S1SvImJ_P0086926 Prss36 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0086927.1 MGP_129S1SvImJ_G0033066.1 mouse_genomes_project 7 132323767 132326649 - Prss36 protein_coding processed_transcript MGP_129S1SvImJ_T0086928.1 MGP_129S1SvImJ_G0033066.1 mouse_genomes_project 7 132323767 132326609 - Prss36 protein_coding processed_transcript MGP_129S1SvImJ_T0086929.1 MGP_129S1SvImJ_G0033066.1 mouse_genomes_project 7 132323767 132338890 - MGP_129S1SvImJ_P0086929 Prss36 protein_coding protein_coding MGP_129S1SvImJ_T0086930.1 MGP_129S1SvImJ_G0033066.1 mouse_genomes_project 7 132323767 132338890 - MGP_129S1SvImJ_P0086930 Prss36 protein_coding protein_coding MGP_129S1SvImJ_T0086931.1 MGP_129S1SvImJ_G0033066.1 mouse_genomes_project 7 132323928 132326580 - MGP_129S1SvImJ_P0086931 Prss36 protein_coding protein_coding MGP_129S1SvImJ_T0086932.1 MGP_129S1SvImJ_G0033066.1 mouse_genomes_project 7 132324031 132326559 - MGP_129S1SvImJ_P0086932 Prss36 protein_coding protein_coding MGP_129S1SvImJ_T0086933.1 MGP_129S1SvImJ_G0033066.1 mouse_genomes_project 7 132324089 132327227 - Prss36 protein_coding retained_intron MGP_129S1SvImJ_T0086934.1 MGP_129S1SvImJ_G0033066.1 mouse_genomes_project 7 132324136 132326644 - Prss36 protein_coding processed_transcript MGP_129S1SvImJ_T0085022.1 MGP_129S1SvImJ_G0032525.1 mouse_genomes_project 7 100148052 100157356 + MGP_129S1SvImJ_P0085022 Kctd14 protein_coding protein_coding MGP_129S1SvImJ_T0085023.1 MGP_129S1SvImJ_G0032525.1 mouse_genomes_project 7 100149933 100155126 + MGP_129S1SvImJ_P0085023 Kctd14 protein_coding protein_coding MGP_129S1SvImJ_T0085024.1 MGP_129S1SvImJ_G0032525.1 mouse_genomes_project 7 100149933 100157355 + MGP_129S1SvImJ_P0085024 Kctd14 protein_coding protein_coding MGP_129S1SvImJ_T0085025.1 MGP_129S1SvImJ_G0032525.1 mouse_genomes_project 7 100149933 100157355 + MGP_129S1SvImJ_P0085025 Kctd14 protein_coding protein_coding MGP_129S1SvImJ_T0085026.1 MGP_129S1SvImJ_G0032525.1 mouse_genomes_project 7 100149933 100157352 + MGP_129S1SvImJ_P0085026 Kctd14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085027.1 MGP_129S1SvImJ_G0032525.1 mouse_genomes_project 7 100149951 100157354 + MGP_129S1SvImJ_P0085027 Kctd14 protein_coding protein_coding MGP_129S1SvImJ_T0084237.1 MGP_129S1SvImJ_G0032336.1 mouse_genomes_project 7 65484641 65513563 - MGP_129S1SvImJ_P0084237 Fan1 protein_coding protein_coding MGP_129S1SvImJ_T0084238.1 MGP_129S1SvImJ_G0032336.1 mouse_genomes_project 7 65500977 65512856 - Fan1 protein_coding retained_intron MGP_129S1SvImJ_T0084239.1 MGP_129S1SvImJ_G0032336.1 mouse_genomes_project 7 65509638 65513578 - Fan1 protein_coding retained_intron MGP_129S1SvImJ_T0084240.1 MGP_129S1SvImJ_G0032336.1 mouse_genomes_project 7 65510397 65513524 - Fan1 protein_coding retained_intron MGP_129S1SvImJ_T0102817.1 MGP_129S1SvImJ_G0040649.1 mouse_genomes_project 7 107863664 107864630 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0005226.1 MGP_129S1SvImJ_G0004449.1 mouse_genomes_project 7 40466403 40550990 - antisense antisense MGP_129S1SvImJ_T0005227.1 MGP_129S1SvImJ_G0004449.1 mouse_genomes_project 7 40497996 40548377 - antisense antisense MGP_129S1SvImJ_T0005228.1 MGP_129S1SvImJ_G0004449.1 mouse_genomes_project 7 40500109 40525377 - antisense antisense MGP_129S1SvImJ_T0005229.1 MGP_129S1SvImJ_G0004449.1 mouse_genomes_project 7 40525559 40548655 - antisense antisense MGP_129S1SvImJ_T0102793.1 MGP_129S1SvImJ_G0040625.1 mouse_genomes_project 7 88614272 88614900 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0084168.1 MGP_129S1SvImJ_G0032320.1 mouse_genomes_project 7 58237203 58662314 + MGP_129S1SvImJ_P0084168 Gabrb3 protein_coding protein_coding MGP_129S1SvImJ_T0084169.1 MGP_129S1SvImJ_G0032320.1 mouse_genomes_project 7 58415076 58661152 + MGP_129S1SvImJ_P0084169 Gabrb3 protein_coding protein_coding MGP_129S1SvImJ_T0084170.1 MGP_129S1SvImJ_G0032320.1 mouse_genomes_project 7 58415720 58662318 + MGP_129S1SvImJ_P0084170 Gabrb3 protein_coding protein_coding MGP_129S1SvImJ_T0084171.1 MGP_129S1SvImJ_G0032320.1 mouse_genomes_project 7 58415731 58598413 + Gabrb3 protein_coding retained_intron MGP_129S1SvImJ_T0084172.1 MGP_129S1SvImJ_G0032320.1 mouse_genomes_project 7 58416088 58649891 + MGP_129S1SvImJ_P0084172 Gabrb3 protein_coding protein_coding MGP_129S1SvImJ_T0084173.1 MGP_129S1SvImJ_G0032320.1 mouse_genomes_project 7 58624784 58649836 + Gabrb3 protein_coding retained_intron MGP_129S1SvImJ_T0087829.1 MGP_129S1SvImJ_G0033272.1 mouse_genomes_project 7 148753582 148756283 - MGP_129S1SvImJ_P0087829 Cdkn1c protein_coding protein_coding MGP_129S1SvImJ_T0087830.1 MGP_129S1SvImJ_G0033272.1 mouse_genomes_project 7 148753582 148756283 - MGP_129S1SvImJ_P0087830 Cdkn1c protein_coding protein_coding MGP_129S1SvImJ_T0087455.1 MGP_129S1SvImJ_G0033200.1 mouse_genomes_project 7 146054804 146066659 + MGP_129S1SvImJ_P0087455 Nlrp6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0087456.1 MGP_129S1SvImJ_G0033200.1 mouse_genomes_project 7 146058361 146066000 + MGP_129S1SvImJ_P0087456 Nlrp6 protein_coding protein_coding MGP_129S1SvImJ_T0087457.1 MGP_129S1SvImJ_G0033200.1 mouse_genomes_project 7 146058530 146065009 + MGP_129S1SvImJ_P0087457 Nlrp6 protein_coding protein_coding MGP_129S1SvImJ_T0087458.1 MGP_129S1SvImJ_G0033200.1 mouse_genomes_project 7 146059565 146060315 + Nlrp6 protein_coding retained_intron MGP_129S1SvImJ_T0015839.1 MGP_129S1SvImJ_G0013928.1 mouse_genomes_project 7 70982065 70983064 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0083449.1 MGP_129S1SvImJ_G0032126.1 mouse_genomes_project 7 43458068 43477294 + MGP_129S1SvImJ_P0083449 Gm45233 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083451.1 MGP_129S1SvImJ_G0032126.1 mouse_genomes_project 7 43458071 43477377 + MGP_129S1SvImJ_P0083451 Gm45233 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0102703.1 MGP_129S1SvImJ_G0040536.1 mouse_genomes_project 7 12067611 12068053 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085481.1 MGP_129S1SvImJ_G0032650.1 mouse_genomes_project 7 106411784 106412831 + MGP_129S1SvImJ_P0085481 protein_coding protein_coding MGP_129S1SvImJ_T0087926.1 MGP_129S1SvImJ_G0033297.1 mouse_genomes_project 7 150715513 150724265 + MGP_129S1SvImJ_P0087926 Mrgprf protein_coding protein_coding MGP_129S1SvImJ_T0087927.1 MGP_129S1SvImJ_G0033297.1 mouse_genomes_project 7 150715584 150724057 + MGP_129S1SvImJ_P0087927 Mrgprf protein_coding protein_coding MGP_129S1SvImJ_T0082069.1 MGP_129S1SvImJ_G0031796.1 mouse_genomes_project 7 17829679 17840489 - Cblc protein_coding processed_transcript MGP_129S1SvImJ_T0082070.1 MGP_129S1SvImJ_G0031796.1 mouse_genomes_project 7 17830417 17837058 - Cblc protein_coding processed_transcript MGP_129S1SvImJ_T0082071.1 MGP_129S1SvImJ_G0031796.1 mouse_genomes_project 7 17830510 17848277 - MGP_129S1SvImJ_P0082071 Cblc protein_coding protein_coding MGP_129S1SvImJ_T0082072.1 MGP_129S1SvImJ_G0031796.1 mouse_genomes_project 7 17830510 17848293 - MGP_129S1SvImJ_P0082072 Cblc protein_coding protein_coding MGP_129S1SvImJ_T0082073.1 MGP_129S1SvImJ_G0031796.1 mouse_genomes_project 7 17837812 17843727 - Cblc protein_coding processed_transcript MGP_129S1SvImJ_T0082074.1 MGP_129S1SvImJ_G0031796.1 mouse_genomes_project 7 17841857 17844696 - Cblc protein_coding processed_transcript MGP_129S1SvImJ_T0082075.1 MGP_129S1SvImJ_G0031796.1 mouse_genomes_project 7 17843336 17848289 - Cblc protein_coding retained_intron MGP_129S1SvImJ_T0008820.1 MGP_129S1SvImJ_G0007125.1 mouse_genomes_project 7 17821564 17826351 + Gm26600 lincRNA lincRNA MGP_129S1SvImJ_T0002253.1 MGP_129S1SvImJ_G0002165.1 mouse_genomes_project 7 55701536 55703230 + TEC TEC MGP_129S1SvImJ_T0011725.1 MGP_129S1SvImJ_G0009841.1 mouse_genomes_project 7 148738328 148738389 + Gm27901 misc_RNA misc_RNA MGP_129S1SvImJ_T0085483.1 MGP_129S1SvImJ_G0032652.1 mouse_genomes_project 7 106430870 106431851 + MGP_129S1SvImJ_P0085483 Olfr598 protein_coding protein_coding MGP_129S1SvImJ_T0086935.1 MGP_129S1SvImJ_G0033067.1 mouse_genomes_project 7 132362302 132381815 + MGP_129S1SvImJ_P0086935 protein_coding protein_coding MGP_129S1SvImJ_T0086936.1 MGP_129S1SvImJ_G0033067.1 mouse_genomes_project 7 132362335 132378173 + MGP_129S1SvImJ_P0086936 protein_coding protein_coding MGP_129S1SvImJ_T0086937.1 MGP_129S1SvImJ_G0033067.1 mouse_genomes_project 7 132362336 132370472 + protein_coding retained_intron MGP_129S1SvImJ_T0086938.1 MGP_129S1SvImJ_G0033067.1 mouse_genomes_project 7 132362336 132378170 + protein_coding retained_intron MGP_129S1SvImJ_T0086939.1 MGP_129S1SvImJ_G0033067.1 mouse_genomes_project 7 132362353 132378173 + MGP_129S1SvImJ_P0086939 protein_coding protein_coding MGP_129S1SvImJ_T0086940.1 MGP_129S1SvImJ_G0033067.1 mouse_genomes_project 7 132367790 132370472 + protein_coding retained_intron MGP_129S1SvImJ_T0086941.1 MGP_129S1SvImJ_G0033067.1 mouse_genomes_project 7 132368030 132373417 + protein_coding processed_transcript MGP_129S1SvImJ_T0086942.1 MGP_129S1SvImJ_G0033067.1 mouse_genomes_project 7 132370296 132374372 + protein_coding retained_intron MGP_129S1SvImJ_T0086943.1 MGP_129S1SvImJ_G0033067.1 mouse_genomes_project 7 132371126 132372980 + protein_coding retained_intron MGP_129S1SvImJ_T0086944.1 MGP_129S1SvImJ_G0033067.1 mouse_genomes_project 7 132371834 132376374 + protein_coding retained_intron MGP_129S1SvImJ_T0086945.1 MGP_129S1SvImJ_G0033067.1 mouse_genomes_project 7 132373459 132377585 + MGP_129S1SvImJ_P0086945 protein_coding protein_coding MGP_129S1SvImJ_T0086946.1 MGP_129S1SvImJ_G0033067.1 mouse_genomes_project 7 132374276 132376324 + protein_coding retained_intron MGP_129S1SvImJ_T0086947.1 MGP_129S1SvImJ_G0033067.1 mouse_genomes_project 7 132376321 132378148 + MGP_129S1SvImJ_P0086947 protein_coding protein_coding MGP_129S1SvImJ_T0086948.1 MGP_129S1SvImJ_G0033067.1 mouse_genomes_project 7 132376353 132377965 + protein_coding retained_intron MGP_129S1SvImJ_T0086949.1 MGP_129S1SvImJ_G0033067.1 mouse_genomes_project 7 132379197 132381815 + MGP_129S1SvImJ_P0086949 protein_coding protein_coding MGP_129S1SvImJ_T0085445.1 MGP_129S1SvImJ_G0032618.1 mouse_genomes_project 7 105685397 105686378 - MGP_129S1SvImJ_P0085445 Olfr553 protein_coding protein_coding MGP_129S1SvImJ_T0083285.1 MGP_129S1SvImJ_G0032088.1 mouse_genomes_project 7 34787723 34830366 + MGP_129S1SvImJ_P0083285 Cep89 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083286.1 MGP_129S1SvImJ_G0032088.1 mouse_genomes_project 7 34787743 34830368 + MGP_129S1SvImJ_P0083286 Cep89 protein_coding protein_coding MGP_129S1SvImJ_T0083287.1 MGP_129S1SvImJ_G0032088.1 mouse_genomes_project 7 34787795 34801633 + Cep89 protein_coding retained_intron MGP_129S1SvImJ_T0083288.1 MGP_129S1SvImJ_G0032088.1 mouse_genomes_project 7 34787804 34800287 + Cep89 protein_coding processed_transcript MGP_129S1SvImJ_T0083289.1 MGP_129S1SvImJ_G0032088.1 mouse_genomes_project 7 34787818 34800270 + MGP_129S1SvImJ_P0083289 Cep89 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083290.1 MGP_129S1SvImJ_G0032088.1 mouse_genomes_project 7 34806934 34808875 + Cep89 protein_coding processed_transcript MGP_129S1SvImJ_T0083291.1 MGP_129S1SvImJ_G0032088.1 mouse_genomes_project 7 34807026 34811855 + Cep89 protein_coding retained_intron MGP_129S1SvImJ_T0083292.1 MGP_129S1SvImJ_G0032088.1 mouse_genomes_project 7 34808394 34819903 + MGP_129S1SvImJ_P0083292 Cep89 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083293.1 MGP_129S1SvImJ_G0032088.1 mouse_genomes_project 7 34808895 34819404 + Cep89 protein_coding processed_transcript MGP_129S1SvImJ_T0083294.1 MGP_129S1SvImJ_G0032088.1 mouse_genomes_project 7 34818915 34824263 + Cep89 protein_coding retained_intron MGP_129S1SvImJ_T0083295.1 MGP_129S1SvImJ_G0032088.1 mouse_genomes_project 7 34820010 34830360 + MGP_129S1SvImJ_P0083295 Cep89 protein_coding protein_coding MGP_129S1SvImJ_T0005295.1 MGP_129S1SvImJ_G0004496.1 mouse_genomes_project 7 120071934 120072816 + Gm44777 antisense antisense MGP_129S1SvImJ_T0005296.1 MGP_129S1SvImJ_G0004496.1 mouse_genomes_project 7 120071941 120076000 + Gm44777 antisense antisense MGP_129S1SvImJ_T0005297.1 MGP_129S1SvImJ_G0004496.1 mouse_genomes_project 7 120073707 120076320 + Gm44777 antisense antisense MGP_129S1SvImJ_T0082919.1 MGP_129S1SvImJ_G0032015.1 mouse_genomes_project 7 29306287 29308020 + MGP_129S1SvImJ_P0082919 E130208F15Rik protein_coding protein_coding MGP_129S1SvImJ_T0085541.1 MGP_129S1SvImJ_G0032707.1 mouse_genomes_project 7 107413490 107421372 - MGP_129S1SvImJ_P0085541 Olfr649 protein_coding protein_coding MGP_129S1SvImJ_T0085542.1 MGP_129S1SvImJ_G0032707.1 mouse_genomes_project 7 107413491 107414430 - MGP_129S1SvImJ_P0085542 Olfr649 protein_coding protein_coding MGP_129S1SvImJ_T0018401.1 MGP_129S1SvImJ_G0015670.1 mouse_genomes_project 7 56785910 56786845 + Gm15888 processed_transcript processed_transcript MGP_129S1SvImJ_T0015720.1 MGP_129S1SvImJ_G0013809.1 mouse_genomes_project 7 10584928 10586200 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081707.1 MGP_129S1SvImJ_G0031690.1 mouse_genomes_project 7 13456212 13461137 - MGP_129S1SvImJ_P0081707 Obox6 protein_coding protein_coding MGP_129S1SvImJ_T0081171.1 MGP_129S1SvImJ_G0031516.1 mouse_genomes_project 7 187053 202935 + Prkcg protein_coding processed_transcript MGP_129S1SvImJ_T0081176.1 MGP_129S1SvImJ_G0031516.1 mouse_genomes_project 7 202145 233297 + MGP_129S1SvImJ_P0081176 Prkcg protein_coding protein_coding MGP_129S1SvImJ_T0081177.1 MGP_129S1SvImJ_G0031516.1 mouse_genomes_project 7 202268 232573 + MGP_129S1SvImJ_P0081177 Prkcg protein_coding protein_coding MGP_129S1SvImJ_T0081178.1 MGP_129S1SvImJ_G0031516.1 mouse_genomes_project 7 203947 220956 + MGP_129S1SvImJ_P0081178 Prkcg protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081179.1 MGP_129S1SvImJ_G0031516.1 mouse_genomes_project 7 231043 232226 + Prkcg protein_coding retained_intron MGP_129S1SvImJ_T0102821.1 MGP_129S1SvImJ_G0040653.1 mouse_genomes_project 7 109094884 109398380 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0100080.1 MGP_129S1SvImJ_G0038147.1 mouse_genomes_project 7 113448739 113448793 + Gm24842 snRNA snRNA MGP_129S1SvImJ_T0015942.1 MGP_129S1SvImJ_G0014031.1 mouse_genomes_project 7 147546270 147546723 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101342.1 MGP_129S1SvImJ_G0039409.1 mouse_genomes_project 7 112949678 112949808 + Gm24888 snoRNA snoRNA MGP_129S1SvImJ_T0008876.1 MGP_129S1SvImJ_G0007170.1 mouse_genomes_project 7 43908223 43909551 - Gm44707 lincRNA lincRNA MGP_129S1SvImJ_T0084709.1 MGP_129S1SvImJ_G0032420.1 mouse_genomes_project 7 82900683 82911228 - MGP_129S1SvImJ_P0084709 Wdr73 protein_coding protein_coding MGP_129S1SvImJ_T0084710.1 MGP_129S1SvImJ_G0032420.1 mouse_genomes_project 7 82900684 82911191 - Wdr73 protein_coding retained_intron MGP_129S1SvImJ_T0084711.1 MGP_129S1SvImJ_G0032420.1 mouse_genomes_project 7 82900684 82911191 - Wdr73 protein_coding retained_intron MGP_129S1SvImJ_T0084712.1 MGP_129S1SvImJ_G0032420.1 mouse_genomes_project 7 82901219 82911193 - Wdr73 protein_coding retained_intron MGP_129S1SvImJ_T0084713.1 MGP_129S1SvImJ_G0032420.1 mouse_genomes_project 7 82902954 82911178 - Wdr73 protein_coding processed_transcript MGP_129S1SvImJ_T0084714.1 MGP_129S1SvImJ_G0032420.1 mouse_genomes_project 7 82903018 82911179 - MGP_129S1SvImJ_P0084714 Wdr73 protein_coding protein_coding MGP_129S1SvImJ_T0084715.1 MGP_129S1SvImJ_G0032420.1 mouse_genomes_project 7 82903019 82910678 - Wdr73 protein_coding processed_transcript MGP_129S1SvImJ_T0084716.1 MGP_129S1SvImJ_G0032420.1 mouse_genomes_project 7 82903658 82910463 - Wdr73 protein_coding processed_transcript MGP_129S1SvImJ_T0084717.1 MGP_129S1SvImJ_G0032420.1 mouse_genomes_project 7 82907894 82911203 - Wdr73 protein_coding processed_transcript MGP_129S1SvImJ_T0084718.1 MGP_129S1SvImJ_G0032420.1 mouse_genomes_project 7 82910631 82911191 - Wdr73 protein_coding processed_transcript MGP_129S1SvImJ_T0102800.1 MGP_129S1SvImJ_G0040632.1 mouse_genomes_project 7 106009012 106009897 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0084318.1 MGP_129S1SvImJ_G0032353.1 mouse_genomes_project 7 67877070 67922860 - MGP_129S1SvImJ_P0084318 Asb7 protein_coding protein_coding MGP_129S1SvImJ_T0084319.1 MGP_129S1SvImJ_G0032353.1 mouse_genomes_project 7 67877070 67921287 - MGP_129S1SvImJ_P0084319 Asb7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084320.1 MGP_129S1SvImJ_G0032353.1 mouse_genomes_project 7 67909515 67922738 - MGP_129S1SvImJ_P0084320 Asb7 protein_coding protein_coding MGP_129S1SvImJ_T0102672.1 MGP_129S1SvImJ_G0040505.1 mouse_genomes_project 7 7868735 7869109 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0083001.1 MGP_129S1SvImJ_G0032031.1 mouse_genomes_project 7 29576703 29597288 - MGP_129S1SvImJ_P0083001 Kmt2b protein_coding protein_coding MGP_129S1SvImJ_T0083002.1 MGP_129S1SvImJ_G0032031.1 mouse_genomes_project 7 29576703 29597279 - MGP_129S1SvImJ_P0083002 Kmt2b protein_coding protein_coding MGP_129S1SvImJ_T0083003.1 MGP_129S1SvImJ_G0032031.1 mouse_genomes_project 7 29576705 29593902 - MGP_129S1SvImJ_P0083003 Kmt2b protein_coding protein_coding MGP_129S1SvImJ_T0083004.1 MGP_129S1SvImJ_G0032031.1 mouse_genomes_project 7 29577598 29578510 - Kmt2b protein_coding retained_intron MGP_129S1SvImJ_T0083005.1 MGP_129S1SvImJ_G0032031.1 mouse_genomes_project 7 29581013 29582019 - Kmt2b protein_coding retained_intron MGP_129S1SvImJ_T0083006.1 MGP_129S1SvImJ_G0032031.1 mouse_genomes_project 7 29583417 29585009 - Kmt2b protein_coding processed_transcript MGP_129S1SvImJ_T0083007.1 MGP_129S1SvImJ_G0032031.1 mouse_genomes_project 7 29584874 29586839 - Kmt2b protein_coding processed_transcript MGP_129S1SvImJ_T0083008.1 MGP_129S1SvImJ_G0032031.1 mouse_genomes_project 7 29592842 29593636 - Kmt2b protein_coding processed_transcript MGP_129S1SvImJ_T0085498.1 MGP_129S1SvImJ_G0032667.1 mouse_genomes_project 7 106697119 106698073 - MGP_129S1SvImJ_P0085498 Olfr616 protein_coding protein_coding MGP_129S1SvImJ_T0087125.1 MGP_129S1SvImJ_G0033101.1 mouse_genomes_project 7 135959060 135961155 + MGP_129S1SvImJ_P0087125 Fam24a protein_coding protein_coding MGP_129S1SvImJ_T0082723.1 MGP_129S1SvImJ_G0031971.1 mouse_genomes_project 7 28040929 28059919 + MGP_129S1SvImJ_P0082723 Rasgrp4 protein_coding protein_coding MGP_129S1SvImJ_T0082724.1 MGP_129S1SvImJ_G0031971.1 mouse_genomes_project 7 28040929 28059919 + MGP_129S1SvImJ_P0082724 Rasgrp4 protein_coding protein_coding MGP_129S1SvImJ_T0082725.1 MGP_129S1SvImJ_G0031971.1 mouse_genomes_project 7 28040929 28059919 + MGP_129S1SvImJ_P0082725 Rasgrp4 protein_coding protein_coding MGP_129S1SvImJ_T0082726.1 MGP_129S1SvImJ_G0031971.1 mouse_genomes_project 7 28040929 28059919 + MGP_129S1SvImJ_P0082726 Rasgrp4 protein_coding protein_coding MGP_129S1SvImJ_T0082727.1 MGP_129S1SvImJ_G0031971.1 mouse_genomes_project 7 28040929 28059919 + MGP_129S1SvImJ_P0082727 Rasgrp4 protein_coding protein_coding MGP_129S1SvImJ_T0082728.1 MGP_129S1SvImJ_G0031971.1 mouse_genomes_project 7 28040929 28059919 + MGP_129S1SvImJ_P0082728 Rasgrp4 protein_coding protein_coding MGP_129S1SvImJ_T0082729.1 MGP_129S1SvImJ_G0031971.1 mouse_genomes_project 7 28041011 28056688 + Rasgrp4 protein_coding retained_intron MGP_129S1SvImJ_T0082730.1 MGP_129S1SvImJ_G0031971.1 mouse_genomes_project 7 28041011 28061314 + MGP_129S1SvImJ_P0082730 Rasgrp4 protein_coding protein_coding MGP_129S1SvImJ_T0082731.1 MGP_129S1SvImJ_G0031971.1 mouse_genomes_project 7 28041011 28059000 + MGP_129S1SvImJ_P0082731 Rasgrp4 protein_coding protein_coding MGP_129S1SvImJ_T0082732.1 MGP_129S1SvImJ_G0031971.1 mouse_genomes_project 7 28041011 28061335 + MGP_129S1SvImJ_P0082732 Rasgrp4 protein_coding protein_coding MGP_129S1SvImJ_T0082733.1 MGP_129S1SvImJ_G0031971.1 mouse_genomes_project 7 28041060 28058360 + Rasgrp4 protein_coding retained_intron MGP_129S1SvImJ_T0082734.1 MGP_129S1SvImJ_G0031971.1 mouse_genomes_project 7 28041084 28055931 + MGP_129S1SvImJ_P0082734 Rasgrp4 protein_coding protein_coding MGP_129S1SvImJ_T0082735.1 MGP_129S1SvImJ_G0031971.1 mouse_genomes_project 7 28041151 28058885 + MGP_129S1SvImJ_P0082735 Rasgrp4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082736.1 MGP_129S1SvImJ_G0031971.1 mouse_genomes_project 7 28057568 28059000 + MGP_129S1SvImJ_P0082736 Rasgrp4 protein_coding protein_coding MGP_129S1SvImJ_T0083487.1 MGP_129S1SvImJ_G0032136.1 mouse_genomes_project 7 43700205 43706459 + MGP_129S1SvImJ_P0083487 Ctu1 protein_coding protein_coding MGP_129S1SvImJ_T0082457.1 MGP_129S1SvImJ_G0031902.1 mouse_genomes_project 7 25815031 25831333 + MGP_129S1SvImJ_P0082457 protein_coding protein_coding MGP_129S1SvImJ_T0082458.1 MGP_129S1SvImJ_G0031902.1 mouse_genomes_project 7 25815031 25825474 + MGP_129S1SvImJ_P0082458 protein_coding protein_coding MGP_129S1SvImJ_T0082459.1 MGP_129S1SvImJ_G0031902.1 mouse_genomes_project 7 25816368 25825315 + MGP_129S1SvImJ_P0082459 protein_coding protein_coding MGP_129S1SvImJ_T0082460.1 MGP_129S1SvImJ_G0031902.1 mouse_genomes_project 7 25823785 25825474 + MGP_129S1SvImJ_P0082460 protein_coding protein_coding MGP_129S1SvImJ_T0015934.1 MGP_129S1SvImJ_G0014023.1 mouse_genomes_project 7 133489832 133490598 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0083535.1 MGP_129S1SvImJ_G0032157.1 mouse_genomes_project 7 44458772 44462988 - MGP_129S1SvImJ_P0083535 Clec11a protein_coding protein_coding MGP_129S1SvImJ_T0087334.1 MGP_129S1SvImJ_G0033153.1 mouse_genomes_project 7 144906395 144951170 + MGP_129S1SvImJ_P0087334 Adgra1 protein_coding protein_coding MGP_129S1SvImJ_T0087335.1 MGP_129S1SvImJ_G0033153.1 mouse_genomes_project 7 144906586 144918920 + Adgra1 protein_coding processed_transcript MGP_129S1SvImJ_T0087336.1 MGP_129S1SvImJ_G0033153.1 mouse_genomes_project 7 144907183 144913415 + Adgra1 protein_coding retained_intron MGP_129S1SvImJ_T0087411.1 MGP_129S1SvImJ_G0033186.1 mouse_genomes_project 7 145788032 145788992 + MGP_129S1SvImJ_P0087411 Olfr539 protein_coding protein_coding MGP_129S1SvImJ_T0083873.1 MGP_129S1SvImJ_G0032240.1 mouse_genomes_project 7 46007947 46013223 + MGP_129S1SvImJ_P0083873 Car11 protein_coding protein_coding MGP_129S1SvImJ_T0008894.1 MGP_129S1SvImJ_G0007184.1 mouse_genomes_project 7 66767231 66801901 + BC046251 lincRNA lincRNA MGP_129S1SvImJ_T0085198.1 MGP_129S1SvImJ_G0032568.1 mouse_genomes_project 7 103248014 103350005 + MGP_129S1SvImJ_P0085198 C2cd3 protein_coding protein_coding MGP_129S1SvImJ_T0085199.1 MGP_129S1SvImJ_G0032568.1 mouse_genomes_project 7 103248014 103350694 + MGP_129S1SvImJ_P0085199 C2cd3 protein_coding protein_coding MGP_129S1SvImJ_T0085200.1 MGP_129S1SvImJ_G0032568.1 mouse_genomes_project 7 103248027 103302780 + MGP_129S1SvImJ_P0085200 C2cd3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085201.1 MGP_129S1SvImJ_G0032568.1 mouse_genomes_project 7 103248062 103285694 + C2cd3 protein_coding retained_intron MGP_129S1SvImJ_T0085202.1 MGP_129S1SvImJ_G0032568.1 mouse_genomes_project 7 103273505 103335030 + MGP_129S1SvImJ_P0085202 C2cd3 protein_coding protein_coding MGP_129S1SvImJ_T0085203.1 MGP_129S1SvImJ_G0032568.1 mouse_genomes_project 7 103299912 103302504 + C2cd3 protein_coding retained_intron MGP_129S1SvImJ_T0085204.1 MGP_129S1SvImJ_G0032568.1 mouse_genomes_project 7 103308551 103311737 + MGP_129S1SvImJ_P0085204 C2cd3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085205.1 MGP_129S1SvImJ_G0032568.1 mouse_genomes_project 7 103309579 103350696 + MGP_129S1SvImJ_P0085205 C2cd3 protein_coding protein_coding MGP_129S1SvImJ_T0085206.1 MGP_129S1SvImJ_G0032568.1 mouse_genomes_project 7 103322813 103324217 + C2cd3 protein_coding retained_intron MGP_129S1SvImJ_T0085207.1 MGP_129S1SvImJ_G0032568.1 mouse_genomes_project 7 103329401 103335419 + MGP_129S1SvImJ_P0085207 C2cd3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085208.1 MGP_129S1SvImJ_G0032568.1 mouse_genomes_project 7 103331925 103335378 + C2cd3 protein_coding retained_intron MGP_129S1SvImJ_T0085209.1 MGP_129S1SvImJ_G0032568.1 mouse_genomes_project 7 103344743 103350696 + MGP_129S1SvImJ_P0085209 C2cd3 protein_coding protein_coding MGP_129S1SvImJ_T0009047.1 MGP_129S1SvImJ_G0007282.1 mouse_genomes_project 7 133869557 133880538 - lincRNA lincRNA MGP_129S1SvImJ_T0082197.1 MGP_129S1SvImJ_G0031837.1 mouse_genomes_project 7 22943768 22965561 + MGP_129S1SvImJ_P0082197 Phldb3 protein_coding protein_coding MGP_129S1SvImJ_T0082198.1 MGP_129S1SvImJ_G0031837.1 mouse_genomes_project 7 22943830 22965411 + MGP_129S1SvImJ_P0082198 Phldb3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0082199.1 MGP_129S1SvImJ_G0031837.1 mouse_genomes_project 7 22943833 22965411 + MGP_129S1SvImJ_P0082199 Phldb3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0082200.1 MGP_129S1SvImJ_G0031837.1 mouse_genomes_project 7 22944333 22965552 + MGP_129S1SvImJ_P0082200 Phldb3 protein_coding protein_coding MGP_129S1SvImJ_T0082201.1 MGP_129S1SvImJ_G0031837.1 mouse_genomes_project 7 22953813 22962924 + Phldb3 protein_coding retained_intron MGP_129S1SvImJ_T0082202.1 MGP_129S1SvImJ_G0031837.1 mouse_genomes_project 7 22954215 22957104 + Phldb3 protein_coding processed_transcript MGP_129S1SvImJ_T0085582.1 MGP_129S1SvImJ_G0032721.1 mouse_genomes_project 7 107719041 107720067 + MGP_129S1SvImJ_P0085582 Olfr654 protein_coding protein_coding MGP_129S1SvImJ_T0005247.1 MGP_129S1SvImJ_G0004463.1 mouse_genomes_project 7 76020405 76039607 + Gm7580 antisense antisense MGP_129S1SvImJ_T0087436.1 MGP_129S1SvImJ_G0033197.1 mouse_genomes_project 7 146000841 146019037 - MGP_129S1SvImJ_P0087436 Sirt3 protein_coding protein_coding MGP_129S1SvImJ_T0087437.1 MGP_129S1SvImJ_G0033197.1 mouse_genomes_project 7 146000841 146019477 - MGP_129S1SvImJ_P0087437 Sirt3 protein_coding protein_coding MGP_129S1SvImJ_T0087438.1 MGP_129S1SvImJ_G0033197.1 mouse_genomes_project 7 146002191 146015315 - MGP_129S1SvImJ_P0087438 Sirt3 protein_coding protein_coding MGP_129S1SvImJ_T0087439.1 MGP_129S1SvImJ_G0033197.1 mouse_genomes_project 7 146006660 146019037 - MGP_129S1SvImJ_P0087439 Sirt3 protein_coding protein_coding MGP_129S1SvImJ_T0087440.1 MGP_129S1SvImJ_G0033197.1 mouse_genomes_project 7 146013601 146019037 - MGP_129S1SvImJ_P0087440 Sirt3 protein_coding protein_coding MGP_129S1SvImJ_T0084851.1 MGP_129S1SvImJ_G0032459.1 mouse_genomes_project 7 86754345 86777045 - MGP_129S1SvImJ_P0084851 Fah protein_coding protein_coding MGP_129S1SvImJ_T0084852.1 MGP_129S1SvImJ_G0032459.1 mouse_genomes_project 7 86764705 86777943 - MGP_129S1SvImJ_P0084852 Fah protein_coding protein_coding MGP_129S1SvImJ_T0084853.1 MGP_129S1SvImJ_G0032459.1 mouse_genomes_project 7 86770233 86771257 - Fah protein_coding processed_transcript MGP_129S1SvImJ_T0084854.1 MGP_129S1SvImJ_G0032459.1 mouse_genomes_project 7 86770777 86776947 - Fah protein_coding retained_intron MGP_129S1SvImJ_T0011706.1 MGP_129S1SvImJ_G0009822.1 mouse_genomes_project 7 75238208 75238461 + Gm23020 misc_RNA misc_RNA MGP_129S1SvImJ_T0081878.1 MGP_129S1SvImJ_G0031744.1 mouse_genomes_project 7 16730556 16736567 - MGP_129S1SvImJ_P0081878 Psg17 protein_coding protein_coding MGP_129S1SvImJ_T0085774.1 MGP_129S1SvImJ_G0032817.1 mouse_genomes_project 7 111773144 111774137 + MGP_129S1SvImJ_P0085774 protein_coding protein_coding MGP_129S1SvImJ_T0087001.1 MGP_129S1SvImJ_G0033081.1 mouse_genomes_project 7 132687575 132691071 - BC017158 protein_coding retained_intron MGP_129S1SvImJ_T0087002.1 MGP_129S1SvImJ_G0033081.1 mouse_genomes_project 7 132687575 132713933 - MGP_129S1SvImJ_P0087002 BC017158 protein_coding protein_coding MGP_129S1SvImJ_T0087003.1 MGP_129S1SvImJ_G0033081.1 mouse_genomes_project 7 132688336 132713871 - BC017158 protein_coding retained_intron MGP_129S1SvImJ_T0087004.1 MGP_129S1SvImJ_G0033081.1 mouse_genomes_project 7 132688336 132713872 - BC017158 protein_coding retained_intron MGP_129S1SvImJ_T0087005.1 MGP_129S1SvImJ_G0033081.1 mouse_genomes_project 7 132688555 132713858 - MGP_129S1SvImJ_P0087005 BC017158 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087006.1 MGP_129S1SvImJ_G0033081.1 mouse_genomes_project 7 132692187 132713338 - BC017158 protein_coding retained_intron MGP_129S1SvImJ_T0087007.1 MGP_129S1SvImJ_G0033081.1 mouse_genomes_project 7 132692522 132704500 - BC017158 protein_coding retained_intron MGP_129S1SvImJ_T0087008.1 MGP_129S1SvImJ_G0033081.1 mouse_genomes_project 7 132703748 132706433 - MGP_129S1SvImJ_P0087008 BC017158 protein_coding protein_coding MGP_129S1SvImJ_T0085746.1 MGP_129S1SvImJ_G0032795.1 mouse_genomes_project 7 110704051 110770843 + MGP_129S1SvImJ_P0085746 Syt9 protein_coding protein_coding MGP_129S1SvImJ_T0085747.1 MGP_129S1SvImJ_G0032795.1 mouse_genomes_project 7 110704113 110880377 + MGP_129S1SvImJ_P0085747 Syt9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085748.1 MGP_129S1SvImJ_G0032795.1 mouse_genomes_project 7 110704113 110880380 + MGP_129S1SvImJ_P0085748 Syt9 protein_coding protein_coding MGP_129S1SvImJ_T0085749.1 MGP_129S1SvImJ_G0032795.1 mouse_genomes_project 7 110835787 110880377 + Syt9 protein_coding retained_intron MGP_129S1SvImJ_T0085750.1 MGP_129S1SvImJ_G0032795.1 mouse_genomes_project 7 110835821 110880377 + Syt9 protein_coding retained_intron MGP_129S1SvImJ_T0083698.1 MGP_129S1SvImJ_G0032187.1 mouse_genomes_project 7 45158102 45176100 + MGP_129S1SvImJ_P0083698 Tsks protein_coding protein_coding MGP_129S1SvImJ_T0083699.1 MGP_129S1SvImJ_G0032187.1 mouse_genomes_project 7 45158102 45176100 + MGP_129S1SvImJ_P0083699 Tsks protein_coding protein_coding MGP_129S1SvImJ_T0085465.1 MGP_129S1SvImJ_G0032636.1 mouse_genomes_project 7 106045249 106046188 - MGP_129S1SvImJ_P0085465 Olfr577 protein_coding protein_coding MGP_129S1SvImJ_T0086693.1 MGP_129S1SvImJ_G0033017.1 mouse_genomes_project 7 131336316 131340611 - MGP_129S1SvImJ_P0086693 Maz protein_coding unknown_likely_coding MGP_129S1SvImJ_T0086694.1 MGP_129S1SvImJ_G0033017.1 mouse_genomes_project 7 131336325 131340644 - MGP_129S1SvImJ_P0086694 Maz protein_coding protein_coding MGP_129S1SvImJ_T0086695.1 MGP_129S1SvImJ_G0033017.1 mouse_genomes_project 7 131336326 131340506 - MGP_129S1SvImJ_P0086695 Maz protein_coding protein_coding MGP_129S1SvImJ_T0086696.1 MGP_129S1SvImJ_G0033017.1 mouse_genomes_project 7 131337081 131340764 - MGP_129S1SvImJ_P0086696 Maz protein_coding protein_coding MGP_129S1SvImJ_T0086697.1 MGP_129S1SvImJ_G0033017.1 mouse_genomes_project 7 131337241 131339324 - Maz protein_coding retained_intron MGP_129S1SvImJ_T0084053.1 MGP_129S1SvImJ_G0032297.1 mouse_genomes_project 7 49517239 49574923 + Nav2 protein_coding processed_transcript MGP_129S1SvImJ_T0084054.1 MGP_129S1SvImJ_G0032297.1 mouse_genomes_project 7 49570213 49578908 + Nav2 protein_coding retained_intron MGP_129S1SvImJ_T0084055.1 MGP_129S1SvImJ_G0032297.1 mouse_genomes_project 7 49570237 50265517 + MGP_129S1SvImJ_P0084055 Nav2 protein_coding protein_coding MGP_129S1SvImJ_T0084056.1 MGP_129S1SvImJ_G0032297.1 mouse_genomes_project 7 49872307 50046376 + Nav2 protein_coding retained_intron MGP_129S1SvImJ_T0084057.1 MGP_129S1SvImJ_G0032297.1 mouse_genomes_project 7 49872307 50268816 + MGP_129S1SvImJ_P0084057 Nav2 protein_coding protein_coding MGP_129S1SvImJ_T0084058.1 MGP_129S1SvImJ_G0032297.1 mouse_genomes_project 7 49872962 50268819 + MGP_129S1SvImJ_P0084058 Nav2 protein_coding protein_coding MGP_129S1SvImJ_T0084059.1 MGP_129S1SvImJ_G0032297.1 mouse_genomes_project 7 49872963 50136445 + MGP_129S1SvImJ_P0084059 Nav2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084060.1 MGP_129S1SvImJ_G0032297.1 mouse_genomes_project 7 49873086 50268820 + MGP_129S1SvImJ_P0084060 Nav2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0084061.1 MGP_129S1SvImJ_G0032297.1 mouse_genomes_project 7 49932993 50048168 + Nav2 protein_coding retained_intron MGP_129S1SvImJ_T0084062.1 MGP_129S1SvImJ_G0032297.1 mouse_genomes_project 7 49933107 50076136 + Nav2 protein_coding processed_transcript MGP_129S1SvImJ_T0084063.1 MGP_129S1SvImJ_G0032297.1 mouse_genomes_project 7 49933109 49934771 + Nav2 protein_coding retained_intron MGP_129S1SvImJ_T0084064.1 MGP_129S1SvImJ_G0032297.1 mouse_genomes_project 7 49999549 50093112 + Nav2 protein_coding retained_intron MGP_129S1SvImJ_T0084065.1 MGP_129S1SvImJ_G0032297.1 mouse_genomes_project 7 50089239 50105531 + Nav2 protein_coding processed_transcript MGP_129S1SvImJ_T0084066.1 MGP_129S1SvImJ_G0032297.1 mouse_genomes_project 7 50203888 50213358 + MGP_129S1SvImJ_P0084066 Nav2 protein_coding protein_coding MGP_129S1SvImJ_T0084067.1 MGP_129S1SvImJ_G0032297.1 mouse_genomes_project 7 50209498 50212329 + Nav2 protein_coding retained_intron MGP_129S1SvImJ_T0084068.1 MGP_129S1SvImJ_G0032297.1 mouse_genomes_project 7 50233708 50235174 + Nav2 protein_coding retained_intron MGP_129S1SvImJ_T0084069.1 MGP_129S1SvImJ_G0032297.1 mouse_genomes_project 7 50243828 50245407 + Nav2 protein_coding retained_intron MGP_129S1SvImJ_T0084070.1 MGP_129S1SvImJ_G0032297.1 mouse_genomes_project 7 50245951 50248587 + Nav2 protein_coding retained_intron MGP_129S1SvImJ_T0083893.1 MGP_129S1SvImJ_G0032245.1 mouse_genomes_project 7 46035832 46036539 - MGP_129S1SvImJ_P0083893 Spaca4 protein_coding protein_coding MGP_129S1SvImJ_T0015758.1 MGP_129S1SvImJ_G0013847.1 mouse_genomes_project 7 24327478 24327766 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005316.1 MGP_129S1SvImJ_G0004511.1 mouse_genomes_project 7 132399896 132402969 - Gm15533 antisense antisense MGP_129S1SvImJ_T0005317.1 MGP_129S1SvImJ_G0004511.1 mouse_genomes_project 7 132400656 132402999 - Gm15533 antisense antisense MGP_129S1SvImJ_T0015923.1 MGP_129S1SvImJ_G0014012.1 mouse_genomes_project 7 131482493 131483431 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018388.1 MGP_129S1SvImJ_G0015667.1 mouse_genomes_project 7 45862345 45869798 - processed_transcript processed_transcript MGP_129S1SvImJ_T0018389.1 MGP_129S1SvImJ_G0015667.1 mouse_genomes_project 7 45862498 45869798 - processed_transcript processed_transcript MGP_129S1SvImJ_T0018390.1 MGP_129S1SvImJ_G0015667.1 mouse_genomes_project 7 45862662 45869484 - processed_transcript retained_intron MGP_129S1SvImJ_T0018391.1 MGP_129S1SvImJ_G0015667.1 mouse_genomes_project 7 45862685 45869968 - processed_transcript processed_transcript MGP_129S1SvImJ_T0018392.1 MGP_129S1SvImJ_G0015667.1 mouse_genomes_project 7 45862781 45869798 - processed_transcript processed_transcript MGP_129S1SvImJ_T0018393.1 MGP_129S1SvImJ_G0015667.1 mouse_genomes_project 7 45863658 45869814 - processed_transcript retained_intron MGP_129S1SvImJ_T0018394.1 MGP_129S1SvImJ_G0015667.1 mouse_genomes_project 7 45864746 45865637 - processed_transcript processed_transcript MGP_129S1SvImJ_T0018395.1 MGP_129S1SvImJ_G0015667.1 mouse_genomes_project 7 45864773 45869835 - processed_transcript processed_transcript MGP_129S1SvImJ_T0018396.1 MGP_129S1SvImJ_G0015667.1 mouse_genomes_project 7 45868678 45869797 - processed_transcript retained_intron MGP_129S1SvImJ_T0082401.1 MGP_129S1SvImJ_G0031884.1 mouse_genomes_project 7 24810884 24813126 + MGP_129S1SvImJ_P0082401 Vmn1r184 protein_coding protein_coding MGP_129S1SvImJ_T0086424.1 MGP_129S1SvImJ_G0032975.1 mouse_genomes_project 7 130626320 130631976 - MGP_129S1SvImJ_P0086424 Lat protein_coding protein_coding MGP_129S1SvImJ_T0086425.1 MGP_129S1SvImJ_G0032975.1 mouse_genomes_project 7 130626323 130631969 - MGP_129S1SvImJ_P0086425 Lat protein_coding protein_coding MGP_129S1SvImJ_T0086426.1 MGP_129S1SvImJ_G0032975.1 mouse_genomes_project 7 130626400 130627384 - Lat protein_coding retained_intron MGP_129S1SvImJ_T0086427.1 MGP_129S1SvImJ_G0032975.1 mouse_genomes_project 7 130629952 130632005 - Lat protein_coding retained_intron MGP_129S1SvImJ_T0086428.1 MGP_129S1SvImJ_G0032975.1 mouse_genomes_project 7 130630533 130631929 - MGP_129S1SvImJ_P0086428 Lat protein_coding protein_coding MGP_129S1SvImJ_T0086429.1 MGP_129S1SvImJ_G0032975.1 mouse_genomes_project 7 130631091 130631775 - Lat protein_coding retained_intron MGP_129S1SvImJ_T0083252.1 MGP_129S1SvImJ_G0032080.1 mouse_genomes_project 7 34259461 34393488 + MGP_129S1SvImJ_P0083252 Pepd protein_coding protein_coding MGP_129S1SvImJ_T0083253.1 MGP_129S1SvImJ_G0032080.1 mouse_genomes_project 7 34293273 34370568 + MGP_129S1SvImJ_P0083253 Pepd protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083254.1 MGP_129S1SvImJ_G0032080.1 mouse_genomes_project 7 34316944 34389514 + Pepd protein_coding retained_intron MGP_129S1SvImJ_T0083255.1 MGP_129S1SvImJ_G0032080.1 mouse_genomes_project 7 34317171 34328453 + Pepd protein_coding retained_intron MGP_129S1SvImJ_T0083256.1 MGP_129S1SvImJ_G0032080.1 mouse_genomes_project 7 34389261 34393487 + Pepd protein_coding retained_intron MGP_129S1SvImJ_T0083257.1 MGP_129S1SvImJ_G0032080.1 mouse_genomes_project 7 34391969 34393314 + Pepd protein_coding retained_intron MGP_129S1SvImJ_T0087374.1 MGP_129S1SvImJ_G0033164.1 mouse_genomes_project 7 145193459 145207060 - MGP_129S1SvImJ_P0087374 Echs1 protein_coding protein_coding MGP_129S1SvImJ_T0087375.1 MGP_129S1SvImJ_G0033164.1 mouse_genomes_project 7 145193460 145206978 - MGP_129S1SvImJ_P0087375 Echs1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0087376.1 MGP_129S1SvImJ_G0033164.1 mouse_genomes_project 7 145193467 145206973 - Echs1 protein_coding retained_intron MGP_129S1SvImJ_T0087377.1 MGP_129S1SvImJ_G0033164.1 mouse_genomes_project 7 145193833 145202373 - MGP_129S1SvImJ_P0087377 Echs1 protein_coding protein_coding MGP_129S1SvImJ_T0087378.1 MGP_129S1SvImJ_G0033164.1 mouse_genomes_project 7 145197565 145206999 - Echs1 protein_coding retained_intron MGP_129S1SvImJ_T0087379.1 MGP_129S1SvImJ_G0033164.1 mouse_genomes_project 7 145197565 145206999 - Echs1 protein_coding retained_intron MGP_129S1SvImJ_T0087380.1 MGP_129S1SvImJ_G0033164.1 mouse_genomes_project 7 145201105 145206991 - Echs1 protein_coding processed_transcript MGP_129S1SvImJ_T0100084.1 MGP_129S1SvImJ_G0038151.1 mouse_genomes_project 7 122105724 122105829 + Gm23229 snRNA snRNA MGP_129S1SvImJ_T0081575.1 MGP_129S1SvImJ_G0031642.1 mouse_genomes_project 7 9690351 9691269 + MGP_129S1SvImJ_P0081575 Vmn1r82 protein_coding protein_coding MGP_129S1SvImJ_T0081576.1 MGP_129S1SvImJ_G0031642.1 mouse_genomes_project 7 9690354 9691269 + MGP_129S1SvImJ_P0081576 Vmn1r82 protein_coding protein_coding MGP_129S1SvImJ_T0084116.1 MGP_129S1SvImJ_G0032312.1 mouse_genomes_project 7 56600523 56640151 + MGP_129S1SvImJ_P0084116 Tubgcp5 protein_coding protein_coding MGP_129S1SvImJ_T0084117.1 MGP_129S1SvImJ_G0032312.1 mouse_genomes_project 7 56600534 56634808 + Tubgcp5 protein_coding retained_intron MGP_129S1SvImJ_T0084118.1 MGP_129S1SvImJ_G0032312.1 mouse_genomes_project 7 56600537 56639920 + MGP_129S1SvImJ_P0084118 Tubgcp5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084119.1 MGP_129S1SvImJ_G0032312.1 mouse_genomes_project 7 56600561 56639920 + MGP_129S1SvImJ_P0084119 Tubgcp5 protein_coding protein_coding MGP_129S1SvImJ_T0084120.1 MGP_129S1SvImJ_G0032312.1 mouse_genomes_project 7 56600595 56605283 + MGP_129S1SvImJ_P0084120 Tubgcp5 protein_coding protein_coding MGP_129S1SvImJ_T0084121.1 MGP_129S1SvImJ_G0032312.1 mouse_genomes_project 7 56610995 56615320 + Tubgcp5 protein_coding retained_intron MGP_129S1SvImJ_T0084122.1 MGP_129S1SvImJ_G0032312.1 mouse_genomes_project 7 56612648 56624359 + Tubgcp5 protein_coding retained_intron MGP_129S1SvImJ_T0084123.1 MGP_129S1SvImJ_G0032312.1 mouse_genomes_project 7 56623906 56625631 + Tubgcp5 protein_coding retained_intron MGP_129S1SvImJ_T0084124.1 MGP_129S1SvImJ_G0032312.1 mouse_genomes_project 7 56628249 56639409 + Tubgcp5 protein_coding retained_intron MGP_129S1SvImJ_T0084125.1 MGP_129S1SvImJ_G0032312.1 mouse_genomes_project 7 56633989 56639711 + MGP_129S1SvImJ_P0084125 Tubgcp5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0002323.1 MGP_129S1SvImJ_G0002234.1 mouse_genomes_project 7 126688978 126690327 + TEC TEC MGP_129S1SvImJ_T0083951.1 MGP_129S1SvImJ_G0032260.1 mouse_genomes_project 7 46453884 46535934 - MGP_129S1SvImJ_P0083951 Abcc8 protein_coding protein_coding MGP_129S1SvImJ_T0083962.1 MGP_129S1SvImJ_G0032263.1 mouse_genomes_project 7 46747137 46749741 + MGP_129S1SvImJ_P0083962 Myod1 protein_coding protein_coding MGP_129S1SvImJ_T0101325.1 MGP_129S1SvImJ_G0039392.1 mouse_genomes_project 7 63691000 63691128 + Gm22494 snoRNA snoRNA MGP_129S1SvImJ_T0100078.1 MGP_129S1SvImJ_G0038145.1 mouse_genomes_project 7 112479925 112480032 - Gm25450 snRNA snRNA MGP_129S1SvImJ_T0011710.1 MGP_129S1SvImJ_G0009826.1 mouse_genomes_project 7 93591061 93591271 - Gm27470 misc_RNA misc_RNA MGP_129S1SvImJ_T0018435.1 MGP_129S1SvImJ_G0015681.1 mouse_genomes_project 7 100905222 100907415 + Gm16938 processed_transcript processed_transcript MGP_129S1SvImJ_T0018436.1 MGP_129S1SvImJ_G0015681.1 mouse_genomes_project 7 100905269 100907415 + Gm16938 processed_transcript processed_transcript MGP_129S1SvImJ_T0086902.1 MGP_129S1SvImJ_G0033059.1 mouse_genomes_project 7 132259422 132261718 + Zfp646 protein_coding retained_intron MGP_129S1SvImJ_T0086903.1 MGP_129S1SvImJ_G0033059.1 mouse_genomes_project 7 132259997 132263390 + MGP_129S1SvImJ_P0086903 Zfp646 protein_coding protein_coding MGP_129S1SvImJ_T0086904.1 MGP_129S1SvImJ_G0033059.1 mouse_genomes_project 7 132260902 132269198 + MGP_129S1SvImJ_P0086904 Zfp646 protein_coding protein_coding MGP_129S1SvImJ_T0086905.1 MGP_129S1SvImJ_G0033059.1 mouse_genomes_project 7 132262512 132269194 + MGP_129S1SvImJ_P0086905 Zfp646 protein_coding protein_coding MGP_129S1SvImJ_T0081706.1 MGP_129S1SvImJ_G0031689.1 mouse_genomes_project 7 13004615 13005962 + MGP_129S1SvImJ_P0081706 protein_coding protein_coding MGP_129S1SvImJ_T0010951.1 MGP_129S1SvImJ_G0009067.1 mouse_genomes_project 7 145033369 145033426 - Mir7686 miRNA miRNA MGP_129S1SvImJ_T0085068.1 MGP_129S1SvImJ_G0032532.1 mouse_genomes_project 7 100645894 100769310 + MGP_129S1SvImJ_P0085068 Gdpd4 protein_coding protein_coding MGP_129S1SvImJ_T0085069.1 MGP_129S1SvImJ_G0032532.1 mouse_genomes_project 7 100677472 100768370 + MGP_129S1SvImJ_P0085069 Gdpd4 protein_coding protein_coding MGP_129S1SvImJ_T0087151.1 MGP_129S1SvImJ_G0033110.1 mouse_genomes_project 7 136722234 136838641 - MGP_129S1SvImJ_P0087151 Cpxm2 protein_coding protein_coding MGP_129S1SvImJ_T0087152.1 MGP_129S1SvImJ_G0033110.1 mouse_genomes_project 7 136734079 136740548 - Cpxm2 protein_coding retained_intron MGP_129S1SvImJ_T0087153.1 MGP_129S1SvImJ_G0033110.1 mouse_genomes_project 7 136736512 136838524 - Cpxm2 protein_coding retained_intron MGP_129S1SvImJ_T0087154.1 MGP_129S1SvImJ_G0033110.1 mouse_genomes_project 7 136792131 136829523 - Cpxm2 protein_coding processed_transcript MGP_129S1SvImJ_T0010882.1 MGP_129S1SvImJ_G0008998.1 mouse_genomes_project 7 42514191 42514301 - Gm22707 miRNA miRNA MGP_129S1SvImJ_T0005274.1 MGP_129S1SvImJ_G0004481.1 mouse_genomes_project 7 99278463 99313718 - Gm15414 antisense antisense MGP_129S1SvImJ_T0082961.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571196 29573250 + U2af1l4 protein_coding processed_transcript MGP_129S1SvImJ_T0082962.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571202 29573021 + U2af1l4 protein_coding processed_transcript MGP_129S1SvImJ_T0082963.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571214 29572377 + MGP_129S1SvImJ_P0082963 U2af1l4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082964.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571216 29573261 + MGP_129S1SvImJ_P0082964 U2af1l4 protein_coding protein_coding MGP_129S1SvImJ_T0082965.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571220 29573258 + MGP_129S1SvImJ_P0082965 U2af1l4 protein_coding protein_coding MGP_129S1SvImJ_T0082966.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571221 29572503 + U2af1l4 protein_coding retained_intron MGP_129S1SvImJ_T0082967.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571221 29573247 + MGP_129S1SvImJ_P0082967 U2af1l4 protein_coding protein_coding MGP_129S1SvImJ_T0082968.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571224 29572507 + U2af1l4 protein_coding retained_intron MGP_129S1SvImJ_T0082969.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571225 29572504 + U2af1l4 protein_coding retained_intron MGP_129S1SvImJ_T0082970.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571231 29573056 + MGP_129S1SvImJ_P0082970 U2af1l4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082971.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571233 29572694 + MGP_129S1SvImJ_P0082971 U2af1l4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082972.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571234 29573060 + MGP_129S1SvImJ_P0082972 U2af1l4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082973.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571235 29571955 + U2af1l4 protein_coding retained_intron MGP_129S1SvImJ_T0082974.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571237 29573140 + U2af1l4 protein_coding retained_intron MGP_129S1SvImJ_T0082975.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571239 29572634 + MGP_129S1SvImJ_P0082975 U2af1l4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082976.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571239 29575854 + MGP_129S1SvImJ_P0082976 U2af1l4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082977.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571241 29572397 + U2af1l4 protein_coding retained_intron MGP_129S1SvImJ_T0082978.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571243 29573260 + MGP_129S1SvImJ_P0082978 U2af1l4 protein_coding protein_coding MGP_129S1SvImJ_T0082979.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571244 29571954 + U2af1l4 protein_coding retained_intron MGP_129S1SvImJ_T0082980.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571245 29573257 + U2af1l4 protein_coding processed_transcript MGP_129S1SvImJ_T0082981.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571245 29575856 + MGP_129S1SvImJ_P0082981 U2af1l4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082982.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571250 29575851 + MGP_129S1SvImJ_P0082982 U2af1l4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082983.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571251 29573075 + MGP_129S1SvImJ_P0082983 U2af1l4 protein_coding protein_coding MGP_129S1SvImJ_T0082984.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571251 29573075 + MGP_129S1SvImJ_P0082984 U2af1l4 protein_coding protein_coding MGP_129S1SvImJ_T0082985.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571251 29573075 + MGP_129S1SvImJ_P0082985 U2af1l4 protein_coding protein_coding MGP_129S1SvImJ_T0082986.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571251 29573075 + MGP_129S1SvImJ_P0082986 U2af1l4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082987.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571253 29573255 + U2af1l4 protein_coding processed_transcript MGP_129S1SvImJ_T0082988.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571253 29572444 + MGP_129S1SvImJ_P0082988 U2af1l4 protein_coding protein_coding MGP_129S1SvImJ_T0082989.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571254 29575295 + U2af1l4 protein_coding retained_intron MGP_129S1SvImJ_T0082990.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571255 29572372 + U2af1l4 protein_coding retained_intron MGP_129S1SvImJ_T0082991.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571262 29573068 + U2af1l4 protein_coding processed_transcript MGP_129S1SvImJ_T0082992.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571273 29573260 + U2af1l4 protein_coding retained_intron MGP_129S1SvImJ_T0082993.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571288 29572251 + U2af1l4 protein_coding retained_intron MGP_129S1SvImJ_T0082994.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571290 29573075 + MGP_129S1SvImJ_P0082994 U2af1l4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082995.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571292 29573075 + MGP_129S1SvImJ_P0082995 U2af1l4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082996.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571721 29572503 + U2af1l4 protein_coding retained_intron MGP_129S1SvImJ_T0082997.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571766 29572174 + U2af1l4 protein_coding processed_transcript MGP_129S1SvImJ_T0082998.1 MGP_129S1SvImJ_G0032029.1 mouse_genomes_project 7 29571774 29573075 + MGP_129S1SvImJ_P0082998 U2af1l4 protein_coding protein_coding MGP_129S1SvImJ_T0102748.1 MGP_129S1SvImJ_G0040580.1 mouse_genomes_project 7 47655374 47655863 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0081652.1 MGP_129S1SvImJ_G0031667.1 mouse_genomes_project 7 10545201 10546089 - MGP_129S1SvImJ_P0081652 Vmn1r87 protein_coding protein_coding MGP_129S1SvImJ_T0082334.1 MGP_129S1SvImJ_G0031868.1 mouse_genomes_project 7 24000606 24031272 - MGP_129S1SvImJ_P0082334 protein_coding protein_coding MGP_129S1SvImJ_T0082335.1 MGP_129S1SvImJ_G0031868.1 mouse_genomes_project 7 24001404 24031272 - MGP_129S1SvImJ_P0082335 protein_coding protein_coding MGP_129S1SvImJ_T0008986.1 MGP_129S1SvImJ_G0007246.1 mouse_genomes_project 7 103326198 103355379 - Gm10603 lincRNA lincRNA MGP_129S1SvImJ_T0008987.1 MGP_129S1SvImJ_G0007246.1 mouse_genomes_project 7 103339973 103347734 - Gm10603 lincRNA lincRNA MGP_129S1SvImJ_T0008988.1 MGP_129S1SvImJ_G0007246.1 mouse_genomes_project 7 103344109 103355384 - Gm10603 lincRNA lincRNA MGP_129S1SvImJ_T0083702.1 MGP_129S1SvImJ_G0032190.1 mouse_genomes_project 7 45197469 45209640 - MGP_129S1SvImJ_P0083702 protein_coding protein_coding MGP_129S1SvImJ_T0085805.1 MGP_129S1SvImJ_G0032839.1 mouse_genomes_project 7 112541865 112579681 - MGP_129S1SvImJ_P0085805 Lmo1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0083090.1 MGP_129S1SvImJ_G0032052.1 mouse_genomes_project 7 29993011 30009064 - MGP_129S1SvImJ_P0083090 Usf2 protein_coding protein_coding MGP_129S1SvImJ_T0083091.1 MGP_129S1SvImJ_G0032052.1 mouse_genomes_project 7 29993017 30009092 - Usf2 protein_coding processed_transcript MGP_129S1SvImJ_T0083092.1 MGP_129S1SvImJ_G0032052.1 mouse_genomes_project 7 29993017 30009253 - MGP_129S1SvImJ_P0083092 Usf2 protein_coding protein_coding MGP_129S1SvImJ_T0083093.1 MGP_129S1SvImJ_G0032052.1 mouse_genomes_project 7 29993017 30009253 - MGP_129S1SvImJ_P0083093 Usf2 protein_coding protein_coding MGP_129S1SvImJ_T0083094.1 MGP_129S1SvImJ_G0032052.1 mouse_genomes_project 7 29993017 30009253 - MGP_129S1SvImJ_P0083094 Usf2 protein_coding protein_coding MGP_129S1SvImJ_T0083095.1 MGP_129S1SvImJ_G0032052.1 mouse_genomes_project 7 29993017 30008265 - MGP_129S1SvImJ_P0083095 Usf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083096.1 MGP_129S1SvImJ_G0032052.1 mouse_genomes_project 7 29993188 30008275 - Usf2 protein_coding retained_intron MGP_129S1SvImJ_T0083097.1 MGP_129S1SvImJ_G0032052.1 mouse_genomes_project 7 29993278 30008731 - MGP_129S1SvImJ_P0083097 Usf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083099.1 MGP_129S1SvImJ_G0032052.1 mouse_genomes_project 7 30008751 30009443 - Usf2 protein_coding processed_transcript MGP_129S1SvImJ_T0082151.1 MGP_129S1SvImJ_G0031826.1 mouse_genomes_project 7 22686054 22701625 + MGP_129S1SvImJ_P0082151 Kcnn4 protein_coding protein_coding MGP_129S1SvImJ_T0082152.1 MGP_129S1SvImJ_G0031826.1 mouse_genomes_project 7 22686090 22701621 + MGP_129S1SvImJ_P0082152 Kcnn4 protein_coding protein_coding MGP_129S1SvImJ_T0082153.1 MGP_129S1SvImJ_G0031826.1 mouse_genomes_project 7 22686129 22701180 + MGP_129S1SvImJ_P0082153 Kcnn4 protein_coding protein_coding MGP_129S1SvImJ_T0082154.1 MGP_129S1SvImJ_G0031826.1 mouse_genomes_project 7 22698472 22701210 + Kcnn4 protein_coding retained_intron MGP_129S1SvImJ_T0082155.1 MGP_129S1SvImJ_G0031826.1 mouse_genomes_project 7 22699475 22703149 + Kcnn4 protein_coding retained_intron MGP_129S1SvImJ_T0008967.1 MGP_129S1SvImJ_G0007230.1 mouse_genomes_project 7 86331571 86375377 + Gm26708 lincRNA lincRNA MGP_129S1SvImJ_T0102777.1 MGP_129S1SvImJ_G0040609.1 mouse_genomes_project 7 87498308 87537271 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085606.1 MGP_129S1SvImJ_G0032744.1 mouse_genomes_project 7 108562599 108563675 + MGP_129S1SvImJ_P0085606 Olfr689 protein_coding protein_coding MGP_129S1SvImJ_T0086178.1 MGP_129S1SvImJ_G0032920.1 mouse_genomes_project 7 123788422 123831168 - MGP_129S1SvImJ_P0086178 Dcun1d3 protein_coding protein_coding MGP_129S1SvImJ_T0086179.1 MGP_129S1SvImJ_G0032920.1 mouse_genomes_project 7 123791072 123830966 - MGP_129S1SvImJ_P0086179 Dcun1d3 protein_coding protein_coding MGP_129S1SvImJ_T0086180.1 MGP_129S1SvImJ_G0032920.1 mouse_genomes_project 7 123792584 123831714 - MGP_129S1SvImJ_P0086180 Dcun1d3 protein_coding protein_coding MGP_129S1SvImJ_T0086181.1 MGP_129S1SvImJ_G0032920.1 mouse_genomes_project 7 123793252 123797097 - MGP_129S1SvImJ_P0086181 Dcun1d3 protein_coding protein_coding MGP_129S1SvImJ_T0086182.1 MGP_129S1SvImJ_G0032920.1 mouse_genomes_project 7 123794885 123797069 - MGP_129S1SvImJ_P0086182 Dcun1d3 protein_coding protein_coding MGP_129S1SvImJ_T0085486.1 MGP_129S1SvImJ_G0032655.1 mouse_genomes_project 7 106471220 106472165 - MGP_129S1SvImJ_P0085486 protein_coding protein_coding MGP_129S1SvImJ_T0015852.1 MGP_129S1SvImJ_G0013941.1 mouse_genomes_project 7 81296394 81296602 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084044.1 MGP_129S1SvImJ_G0032293.1 mouse_genomes_project 7 49253818 49254827 - MGP_129S1SvImJ_P0084044 Mrgprb3 protein_coding protein_coding MGP_129S1SvImJ_T0101312.1 MGP_129S1SvImJ_G0039379.1 mouse_genomes_project 7 45637892 45638046 + Gm22478 snoRNA snoRNA MGP_129S1SvImJ_T0010933.1 MGP_129S1SvImJ_G0009049.1 mouse_genomes_project 7 112949647 112949767 + miRNA miRNA MGP_129S1SvImJ_T0087293.1 MGP_129S1SvImJ_G0033145.1 mouse_genomes_project 7 143946131 144044767 + MGP_129S1SvImJ_P0087293 Jakmip3 protein_coding protein_coding MGP_129S1SvImJ_T0087294.1 MGP_129S1SvImJ_G0033145.1 mouse_genomes_project 7 143946151 144044761 + MGP_129S1SvImJ_P0087294 Jakmip3 protein_coding protein_coding MGP_129S1SvImJ_T0087295.1 MGP_129S1SvImJ_G0033145.1 mouse_genomes_project 7 144001653 144063888 + MGP_129S1SvImJ_P0087295 Jakmip3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0087296.1 MGP_129S1SvImJ_G0033145.1 mouse_genomes_project 7 144060504 144081481 + MGP_129S1SvImJ_P0087296 Jakmip3 protein_coding protein_coding MGP_129S1SvImJ_T0015837.1 MGP_129S1SvImJ_G0013926.1 mouse_genomes_project 7 69060170 69061175 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005205.1 MGP_129S1SvImJ_G0004433.1 mouse_genomes_project 7 29738441 29758868 + Tmem147os antisense antisense MGP_129S1SvImJ_T0005206.1 MGP_129S1SvImJ_G0004433.1 mouse_genomes_project 7 29741441 29746166 + Tmem147os antisense antisense MGP_129S1SvImJ_T0083429.1 MGP_129S1SvImJ_G0032118.1 mouse_genomes_project 7 43359025 43367141 + Siglecf protein_coding retained_intron MGP_129S1SvImJ_T0083430.1 MGP_129S1SvImJ_G0032118.1 mouse_genomes_project 7 43359025 43367143 + MGP_129S1SvImJ_P0083430 Siglecf protein_coding protein_coding MGP_129S1SvImJ_T0083431.1 MGP_129S1SvImJ_G0032118.1 mouse_genomes_project 7 43359067 43359528 + Siglecf protein_coding processed_transcript MGP_129S1SvImJ_T0083432.1 MGP_129S1SvImJ_G0032118.1 mouse_genomes_project 7 43359092 43367204 + MGP_129S1SvImJ_P0083432 Siglecf protein_coding protein_coding MGP_129S1SvImJ_T0083433.1 MGP_129S1SvImJ_G0032118.1 mouse_genomes_project 7 43359206 43366962 + MGP_129S1SvImJ_P0083433 Siglecf protein_coding protein_coding MGP_129S1SvImJ_T0083434.1 MGP_129S1SvImJ_G0032118.1 mouse_genomes_project 7 43359232 43364291 + MGP_129S1SvImJ_P0083434 Siglecf protein_coding protein_coding MGP_129S1SvImJ_T0081861.1 MGP_129S1SvImJ_G0031730.1 mouse_genomes_project 7 14930602 14947558 + MGP_129S1SvImJ_P0081861 Ceacam3 protein_coding protein_coding MGP_129S1SvImJ_T0002321.1 MGP_129S1SvImJ_G0002232.1 mouse_genomes_project 7 126494925 126498075 + TEC TEC MGP_129S1SvImJ_T0082029.1 MGP_129S1SvImJ_G0031787.1 mouse_genomes_project 7 17638626 17661808 - Relb protein_coding retained_intron MGP_129S1SvImJ_T0082030.1 MGP_129S1SvImJ_G0031787.1 mouse_genomes_project 7 17638626 17661808 - Relb protein_coding retained_intron MGP_129S1SvImJ_T0082031.1 MGP_129S1SvImJ_G0031787.1 mouse_genomes_project 7 17638626 17661808 - Relb protein_coding retained_intron MGP_129S1SvImJ_T0082032.1 MGP_129S1SvImJ_G0031787.1 mouse_genomes_project 7 17638626 17661808 - MGP_129S1SvImJ_P0082032 Relb protein_coding protein_coding MGP_129S1SvImJ_T0082033.1 MGP_129S1SvImJ_G0031787.1 mouse_genomes_project 7 17638626 17661808 - MGP_129S1SvImJ_P0082033 Relb protein_coding protein_coding MGP_129S1SvImJ_T0082034.1 MGP_129S1SvImJ_G0031787.1 mouse_genomes_project 7 17638632 17661808 - MGP_129S1SvImJ_P0082034 Relb protein_coding protein_coding MGP_129S1SvImJ_T0082035.1 MGP_129S1SvImJ_G0031787.1 mouse_genomes_project 7 17648847 17661154 - Relb protein_coding processed_transcript MGP_129S1SvImJ_T0082036.1 MGP_129S1SvImJ_G0031787.1 mouse_genomes_project 7 17650241 17660843 - Relb protein_coding processed_transcript MGP_129S1SvImJ_T0082037.1 MGP_129S1SvImJ_G0031787.1 mouse_genomes_project 7 17650305 17660804 - Relb protein_coding processed_transcript MGP_129S1SvImJ_T0015892.1 MGP_129S1SvImJ_G0013981.1 mouse_genomes_project 7 107040104 107040366 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102776.1 MGP_129S1SvImJ_G0040608.1 mouse_genomes_project 7 87480735 87482187 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0008805.1 MGP_129S1SvImJ_G0007112.1 mouse_genomes_project 7 341183 342946 - 3300002P13Rik lincRNA lincRNA MGP_129S1SvImJ_T0085189.1 MGP_129S1SvImJ_G0032565.1 mouse_genomes_project 7 103095157 103147954 + MGP_129S1SvImJ_P0085189 Pgm2l1 protein_coding protein_coding MGP_129S1SvImJ_T0085190.1 MGP_129S1SvImJ_G0032565.1 mouse_genomes_project 7 103095451 103150017 + MGP_129S1SvImJ_P0085190 Pgm2l1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085191.1 MGP_129S1SvImJ_G0032565.1 mouse_genomes_project 7 103095473 103151476 + MGP_129S1SvImJ_P0085191 Pgm2l1 protein_coding protein_coding MGP_129S1SvImJ_T0084568.1 MGP_129S1SvImJ_G0032398.1 mouse_genomes_project 7 81734633 81758080 - MGP_129S1SvImJ_P0084568 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0084569.1 MGP_129S1SvImJ_G0032398.1 mouse_genomes_project 7 81734641 81738337 - protein_coding retained_intron MGP_129S1SvImJ_T0084570.1 MGP_129S1SvImJ_G0032398.1 mouse_genomes_project 7 81735101 81761688 - MGP_129S1SvImJ_P0084570 protein_coding protein_coding MGP_129S1SvImJ_T0084571.1 MGP_129S1SvImJ_G0032398.1 mouse_genomes_project 7 81755560 81774498 - MGP_129S1SvImJ_P0084571 protein_coding protein_coding MGP_129S1SvImJ_T0084572.1 MGP_129S1SvImJ_G0032398.1 mouse_genomes_project 7 81756118 81761698 - protein_coding processed_transcript MGP_129S1SvImJ_T0086441.1 MGP_129S1SvImJ_G0032977.1 mouse_genomes_project 7 130645481 130663827 - MGP_129S1SvImJ_P0086441 Nfatc2ip protein_coding protein_coding MGP_129S1SvImJ_T0086442.1 MGP_129S1SvImJ_G0032977.1 mouse_genomes_project 7 130647505 130657664 - MGP_129S1SvImJ_P0086442 Nfatc2ip protein_coding protein_coding MGP_129S1SvImJ_T0082174.1 MGP_129S1SvImJ_G0031830.1 mouse_genomes_project 7 22805950 22831574 + MGP_129S1SvImJ_P0082174 Cadm4 protein_coding protein_coding MGP_129S1SvImJ_T0082175.1 MGP_129S1SvImJ_G0031830.1 mouse_genomes_project 7 22826995 22829829 + Cadm4 protein_coding processed_transcript MGP_129S1SvImJ_T0086294.1 MGP_129S1SvImJ_G0032952.1 mouse_genomes_project 7 126204131 126223488 + MGP_129S1SvImJ_P0086294 Dctn5 protein_coding protein_coding MGP_129S1SvImJ_T0086295.1 MGP_129S1SvImJ_G0032952.1 mouse_genomes_project 7 126204144 126223488 + Dctn5 protein_coding retained_intron MGP_129S1SvImJ_T0086296.1 MGP_129S1SvImJ_G0032952.1 mouse_genomes_project 7 126204162 126206222 + MGP_129S1SvImJ_P0086296 Dctn5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086297.1 MGP_129S1SvImJ_G0032952.1 mouse_genomes_project 7 126216572 126223025 + MGP_129S1SvImJ_P0086297 Dctn5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086456.1 MGP_129S1SvImJ_G0032980.1 mouse_genomes_project 7 130719942 130737191 - MGP_129S1SvImJ_P0086456 Atp2a1 protein_coding protein_coding MGP_129S1SvImJ_T0086457.1 MGP_129S1SvImJ_G0032980.1 mouse_genomes_project 7 130719944 130721730 - MGP_129S1SvImJ_P0086457 Atp2a1 protein_coding protein_coding MGP_129S1SvImJ_T0086458.1 MGP_129S1SvImJ_G0032980.1 mouse_genomes_project 7 130720185 130737937 - MGP_129S1SvImJ_P0086458 Atp2a1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0087395.1 MGP_129S1SvImJ_G0033172.1 mouse_genomes_project 7 145342521 145393493 + MGP_129S1SvImJ_P0087395 5830411N06Rik protein_coding protein_coding MGP_129S1SvImJ_T0087396.1 MGP_129S1SvImJ_G0033172.1 mouse_genomes_project 7 145342598 145395643 + MGP_129S1SvImJ_P0087396 5830411N06Rik protein_coding protein_coding MGP_129S1SvImJ_T0087397.1 MGP_129S1SvImJ_G0033172.1 mouse_genomes_project 7 145342601 145395643 + MGP_129S1SvImJ_P0087397 5830411N06Rik protein_coding protein_coding MGP_129S1SvImJ_T0015699.1 MGP_129S1SvImJ_G0013788.1 mouse_genomes_project 7 1106849 1107722 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085169.1 MGP_129S1SvImJ_G0032558.1 mouse_genomes_project 7 102672053 102695124 - MGP_129S1SvImJ_P0085169 Spcs2 protein_coding protein_coding MGP_129S1SvImJ_T0086675.1 MGP_129S1SvImJ_G0033013.1 mouse_genomes_project 7 131314721 131330676 - MGP_129S1SvImJ_P0086675 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0102719.1 MGP_129S1SvImJ_G0040551.1 mouse_genomes_project 7 24778600 24779147 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0005252.1 MGP_129S1SvImJ_G0004467.1 mouse_genomes_project 7 81614313 81616382 + 9330171B17Rik antisense antisense MGP_129S1SvImJ_T0005253.1 MGP_129S1SvImJ_G0004467.1 mouse_genomes_project 7 81614401 81616384 + 9330171B17Rik antisense antisense MGP_129S1SvImJ_T0084049.1 MGP_129S1SvImJ_G0032296.1 mouse_genomes_project 7 49473809 49488975 - MGP_129S1SvImJ_P0084049 E2f8 protein_coding protein_coding MGP_129S1SvImJ_T0084050.1 MGP_129S1SvImJ_G0032296.1 mouse_genomes_project 7 49473809 49488420 - MGP_129S1SvImJ_P0084050 E2f8 protein_coding protein_coding MGP_129S1SvImJ_T0084051.1 MGP_129S1SvImJ_G0032296.1 mouse_genomes_project 7 49479487 49482632 - E2f8 protein_coding retained_intron MGP_129S1SvImJ_T0084052.1 MGP_129S1SvImJ_G0032296.1 mouse_genomes_project 7 49486211 49488383 - E2f8 protein_coding retained_intron MGP_129S1SvImJ_T0087696.1 MGP_129S1SvImJ_G0033253.1 mouse_genomes_project 7 147571199 147583981 - Ifitm10 protein_coding processed_transcript MGP_129S1SvImJ_T0087697.1 MGP_129S1SvImJ_G0033253.1 mouse_genomes_project 7 147571472 147619816 - MGP_129S1SvImJ_P0087697 Ifitm10 protein_coding protein_coding MGP_129S1SvImJ_T0087698.1 MGP_129S1SvImJ_G0033253.1 mouse_genomes_project 7 147571492 147619644 - Ifitm10 protein_coding processed_transcript MGP_129S1SvImJ_T0087699.1 MGP_129S1SvImJ_G0033253.1 mouse_genomes_project 7 147602948 147619634 - MGP_129S1SvImJ_P0087699 Ifitm10 protein_coding protein_coding MGP_129S1SvImJ_T0087700.1 MGP_129S1SvImJ_G0033253.1 mouse_genomes_project 7 147603362 147621122 - MGP_129S1SvImJ_P0087700 Ifitm10 protein_coding protein_coding MGP_129S1SvImJ_T0087701.1 MGP_129S1SvImJ_G0033253.1 mouse_genomes_project 7 147618517 147620256 - Ifitm10 protein_coding processed_transcript MGP_129S1SvImJ_T0087466.1 MGP_129S1SvImJ_G0033203.1 mouse_genomes_project 7 146092298 146093988 - MGP_129S1SvImJ_P0087466 Ifitm2 protein_coding protein_coding MGP_129S1SvImJ_T0086258.1 MGP_129S1SvImJ_G0032946.1 mouse_genomes_project 7 125927582 125930677 - Cog7 protein_coding retained_intron MGP_129S1SvImJ_T0086259.1 MGP_129S1SvImJ_G0032946.1 mouse_genomes_project 7 125928186 126038856 - MGP_129S1SvImJ_P0086259 Cog7 protein_coding protein_coding MGP_129S1SvImJ_T0086261.1 MGP_129S1SvImJ_G0032946.1 mouse_genomes_project 7 125975113 126038856 - MGP_129S1SvImJ_P0086261 Cog7 protein_coding protein_coding MGP_129S1SvImJ_T0086262.1 MGP_129S1SvImJ_G0032946.1 mouse_genomes_project 7 125982678 126038839 - Cog7 protein_coding retained_intron MGP_129S1SvImJ_T0084464.1 MGP_129S1SvImJ_G0032378.1 mouse_genomes_project 7 80606553 80614469 - MGP_129S1SvImJ_P0084464 Mrpl46 protein_coding protein_coding MGP_129S1SvImJ_T0084465.1 MGP_129S1SvImJ_G0032378.1 mouse_genomes_project 7 80606917 80614911 - Mrpl46 protein_coding processed_transcript MGP_129S1SvImJ_T0081468.1 MGP_129S1SvImJ_G0031580.1 mouse_genomes_project 7 2017343 2019534 + MGP_129S1SvImJ_P0081468 Zfp580 protein_coding protein_coding MGP_129S1SvImJ_T0015836.1 MGP_129S1SvImJ_G0013925.1 mouse_genomes_project 7 67414749 67415030 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002228.1 MGP_129S1SvImJ_G0002140.1 mouse_genomes_project 7 33667923 33673243 + TEC TEC MGP_129S1SvImJ_T0081918.1 MGP_129S1SvImJ_G0031757.1 mouse_genomes_project 7 17036992 17046924 + MGP_129S1SvImJ_P0081918 Dmpk protein_coding protein_coding MGP_129S1SvImJ_T0081919.1 MGP_129S1SvImJ_G0031757.1 mouse_genomes_project 7 17037011 17040107 + MGP_129S1SvImJ_P0081919 Dmpk protein_coding protein_coding MGP_129S1SvImJ_T0081920.1 MGP_129S1SvImJ_G0031757.1 mouse_genomes_project 7 17037013 17046924 + MGP_129S1SvImJ_P0081920 Dmpk protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081921.1 MGP_129S1SvImJ_G0031757.1 mouse_genomes_project 7 17037028 17046924 + MGP_129S1SvImJ_P0081921 Dmpk protein_coding protein_coding MGP_129S1SvImJ_T0081922.1 MGP_129S1SvImJ_G0031757.1 mouse_genomes_project 7 17037084 17046924 + MGP_129S1SvImJ_P0081922 Dmpk protein_coding protein_coding MGP_129S1SvImJ_T0081923.1 MGP_129S1SvImJ_G0031757.1 mouse_genomes_project 7 17037853 17040842 + Dmpk protein_coding processed_transcript MGP_129S1SvImJ_T0081924.1 MGP_129S1SvImJ_G0031757.1 mouse_genomes_project 7 17039643 17046922 + Dmpk protein_coding retained_intron MGP_129S1SvImJ_T0081925.1 MGP_129S1SvImJ_G0031757.1 mouse_genomes_project 7 17039643 17046922 + Dmpk protein_coding retained_intron MGP_129S1SvImJ_T0081926.1 MGP_129S1SvImJ_G0031757.1 mouse_genomes_project 7 17039643 17046922 + Dmpk protein_coding processed_transcript MGP_129S1SvImJ_T0081927.1 MGP_129S1SvImJ_G0031757.1 mouse_genomes_project 7 17040409 17042273 + Dmpk protein_coding processed_transcript MGP_129S1SvImJ_T0081928.1 MGP_129S1SvImJ_G0031757.1 mouse_genomes_project 7 17040633 17041772 + Dmpk protein_coding processed_transcript MGP_129S1SvImJ_T0081929.1 MGP_129S1SvImJ_G0031757.1 mouse_genomes_project 7 17040751 17044878 + Dmpk protein_coding processed_transcript MGP_129S1SvImJ_T0081930.1 MGP_129S1SvImJ_G0031757.1 mouse_genomes_project 7 17040886 17042499 + Dmpk protein_coding retained_intron MGP_129S1SvImJ_T0081931.1 MGP_129S1SvImJ_G0031757.1 mouse_genomes_project 7 17041325 17046155 + Dmpk protein_coding processed_transcript MGP_129S1SvImJ_T0081932.1 MGP_129S1SvImJ_G0031757.1 mouse_genomes_project 7 17044594 17045472 + Dmpk protein_coding retained_intron MGP_129S1SvImJ_T0081933.1 MGP_129S1SvImJ_G0031757.1 mouse_genomes_project 7 17044727 17045646 + Dmpk protein_coding processed_transcript MGP_129S1SvImJ_T0081934.1 MGP_129S1SvImJ_G0031757.1 mouse_genomes_project 7 17045328 17046874 + Dmpk protein_coding processed_transcript MGP_129S1SvImJ_T0081935.1 MGP_129S1SvImJ_G0031757.1 mouse_genomes_project 7 17045406 17046309 + Dmpk protein_coding retained_intron MGP_129S1SvImJ_T0084765.1 MGP_129S1SvImJ_G0032431.1 mouse_genomes_project 7 83598917 83633845 - MGP_129S1SvImJ_P0084765 Fsd2 protein_coding protein_coding MGP_129S1SvImJ_T0015711.1 MGP_129S1SvImJ_G0013800.1 mouse_genomes_project 7 3004036 3004985 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010939.1 MGP_129S1SvImJ_G0009055.1 mouse_genomes_project 7 130630405 130630480 - Mir7058 miRNA miRNA MGP_129S1SvImJ_T0008928.1 MGP_129S1SvImJ_G0007210.1 mouse_genomes_project 7 75201657 75209447 + Gm44737 lincRNA lincRNA MGP_129S1SvImJ_T0008831.1 MGP_129S1SvImJ_G0007135.1 mouse_genomes_project 7 28789393 28796934 + Gm26554 lincRNA lincRNA MGP_129S1SvImJ_T0084719.1 MGP_129S1SvImJ_G0032421.1 mouse_genomes_project 7 82912185 82914344 - Nmb protein_coding retained_intron MGP_129S1SvImJ_T0084720.1 MGP_129S1SvImJ_G0032421.1 mouse_genomes_project 7 82912186 82915027 - MGP_129S1SvImJ_P0084720 Nmb protein_coding protein_coding MGP_129S1SvImJ_T0084721.1 MGP_129S1SvImJ_G0032421.1 mouse_genomes_project 7 82912192 82914325 - Nmb protein_coding retained_intron MGP_129S1SvImJ_T0084722.1 MGP_129S1SvImJ_G0032421.1 mouse_genomes_project 7 82912192 82915011 - MGP_129S1SvImJ_P0084722 Nmb protein_coding protein_coding MGP_129S1SvImJ_T0005264.1 MGP_129S1SvImJ_G0004475.1 mouse_genomes_project 7 84873527 84886802 - 4933406J10Rik antisense antisense MGP_129S1SvImJ_T0085724.1 MGP_129S1SvImJ_G0032775.1 mouse_genomes_project 7 110168016 110174577 + MGP_129S1SvImJ_P0085724 Olfr701 protein_coding protein_coding MGP_129S1SvImJ_T0085725.1 MGP_129S1SvImJ_G0032775.1 mouse_genomes_project 7 110168051 110173002 + MGP_129S1SvImJ_P0085725 Olfr701 protein_coding protein_coding MGP_129S1SvImJ_T0002304.1 MGP_129S1SvImJ_G0002215.1 mouse_genomes_project 7 81972175 81976635 + TEC TEC MGP_129S1SvImJ_T0100066.1 MGP_129S1SvImJ_G0038133.1 mouse_genomes_project 7 79687344 79687525 - Gm23239 snRNA snRNA MGP_129S1SvImJ_T0085504.1 MGP_129S1SvImJ_G0032673.1 mouse_genomes_project 7 106802183 106803137 - MGP_129S1SvImJ_P0085504 Olfr622 protein_coding protein_coding MGP_129S1SvImJ_T0002332.1 MGP_129S1SvImJ_G0002243.1 mouse_genomes_project 7 131614722 131616774 + TEC TEC MGP_129S1SvImJ_T0085590.1 MGP_129S1SvImJ_G0032728.1 mouse_genomes_project 7 108062796 108063747 + MGP_129S1SvImJ_P0085590 Olfr665 protein_coding protein_coding MGP_129S1SvImJ_T0087185.1 MGP_129S1SvImJ_G0033118.1 mouse_genomes_project 7 137641471 137696611 + MGP_129S1SvImJ_P0087185 Zranb1 protein_coding protein_coding MGP_129S1SvImJ_T0087186.1 MGP_129S1SvImJ_G0033118.1 mouse_genomes_project 7 137693520 137695428 + Zranb1 protein_coding retained_intron MGP_129S1SvImJ_T0082639.1 MGP_129S1SvImJ_G0031948.1 mouse_genomes_project 7 27272567 27306332 - MGP_129S1SvImJ_P0082639 Ifnl3 protein_coding protein_coding MGP_129S1SvImJ_T0082901.1 MGP_129S1SvImJ_G0032013.1 mouse_genomes_project 7 29299354 29301205 + Syne4 protein_coding processed_transcript MGP_129S1SvImJ_T0082902.1 MGP_129S1SvImJ_G0032013.1 mouse_genomes_project 7 29299363 29303594 + MGP_129S1SvImJ_P0082902 Syne4 protein_coding protein_coding MGP_129S1SvImJ_T0082903.1 MGP_129S1SvImJ_G0032013.1 mouse_genomes_project 7 29299418 29300257 + Syne4 protein_coding retained_intron MGP_129S1SvImJ_T0082904.1 MGP_129S1SvImJ_G0032013.1 mouse_genomes_project 7 29299427 29301639 + MGP_129S1SvImJ_P0082904 Syne4 protein_coding protein_coding MGP_129S1SvImJ_T0082905.1 MGP_129S1SvImJ_G0032013.1 mouse_genomes_project 7 29299432 29301408 + Syne4 protein_coding retained_intron MGP_129S1SvImJ_T0082906.1 MGP_129S1SvImJ_G0032013.1 mouse_genomes_project 7 29299435 29301633 + MGP_129S1SvImJ_P0082906 Syne4 protein_coding protein_coding MGP_129S1SvImJ_T0082907.1 MGP_129S1SvImJ_G0032013.1 mouse_genomes_project 7 29299463 29303594 + MGP_129S1SvImJ_P0082907 Syne4 protein_coding protein_coding MGP_129S1SvImJ_T0082908.1 MGP_129S1SvImJ_G0032013.1 mouse_genomes_project 7 29299697 29300894 + Syne4 protein_coding retained_intron MGP_129S1SvImJ_T0082909.1 MGP_129S1SvImJ_G0032013.1 mouse_genomes_project 7 29299857 29301898 + Syne4 protein_coding retained_intron MGP_129S1SvImJ_T0082910.1 MGP_129S1SvImJ_G0032013.1 mouse_genomes_project 7 29300567 29301415 + Syne4 protein_coding retained_intron MGP_129S1SvImJ_T0082911.1 MGP_129S1SvImJ_G0032013.1 mouse_genomes_project 7 29301319 29303594 + Syne4 protein_coding retained_intron MGP_129S1SvImJ_T0082912.1 MGP_129S1SvImJ_G0032013.1 mouse_genomes_project 7 29301489 29303590 + MGP_129S1SvImJ_P0082912 Syne4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082913.1 MGP_129S1SvImJ_G0032013.1 mouse_genomes_project 7 29301534 29303593 + MGP_129S1SvImJ_P0082913 Syne4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082914.1 MGP_129S1SvImJ_G0032013.1 mouse_genomes_project 7 29301535 29303588 + MGP_129S1SvImJ_P0082914 Syne4 protein_coding protein_coding MGP_129S1SvImJ_T0082915.1 MGP_129S1SvImJ_G0032013.1 mouse_genomes_project 7 29301567 29303592 + MGP_129S1SvImJ_P0082915 Syne4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082916.1 MGP_129S1SvImJ_G0032013.1 mouse_genomes_project 7 29301787 29303588 + Syne4 protein_coding retained_intron MGP_129S1SvImJ_T0082917.1 MGP_129S1SvImJ_G0032013.1 mouse_genomes_project 7 29302313 29303588 + Syne4 protein_coding retained_intron MGP_129S1SvImJ_T0081680.1 MGP_129S1SvImJ_G0031674.1 mouse_genomes_project 7 10827586 10852389 + MGP_129S1SvImJ_P0081680 Bsph1 protein_coding protein_coding MGP_129S1SvImJ_T0081681.1 MGP_129S1SvImJ_G0031674.1 mouse_genomes_project 7 10827601 10852319 + MGP_129S1SvImJ_P0081681 Bsph1 protein_coding protein_coding MGP_129S1SvImJ_T0011708.1 MGP_129S1SvImJ_G0009824.1 mouse_genomes_project 7 76932884 76933207 + Gm24858 misc_RNA misc_RNA MGP_129S1SvImJ_T0082804.1 MGP_129S1SvImJ_G0031988.1 mouse_genomes_project 7 28746785 28762817 + MGP_129S1SvImJ_P0082804 Zfp790 protein_coding protein_coding MGP_129S1SvImJ_T0082805.1 MGP_129S1SvImJ_G0031988.1 mouse_genomes_project 7 28746785 28762817 + MGP_129S1SvImJ_P0082805 Zfp790 protein_coding protein_coding MGP_129S1SvImJ_T0102713.1 MGP_129S1SvImJ_G0040546.1 mouse_genomes_project 7 15421464 15427934 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015768.1 MGP_129S1SvImJ_G0013857.1 mouse_genomes_project 7 30247751 30248538 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082681.1 MGP_129S1SvImJ_G0031962.1 mouse_genomes_project 7 27653413 27666927 + MGP_129S1SvImJ_P0082681 Hnrnpl protein_coding protein_coding MGP_129S1SvImJ_T0082682.1 MGP_129S1SvImJ_G0031962.1 mouse_genomes_project 7 27653678 27661829 + Hnrnpl protein_coding retained_intron MGP_129S1SvImJ_T0082683.1 MGP_129S1SvImJ_G0031962.1 mouse_genomes_project 7 27653680 27666910 + MGP_129S1SvImJ_P0082683 Hnrnpl protein_coding protein_coding MGP_129S1SvImJ_T0082684.1 MGP_129S1SvImJ_G0031962.1 mouse_genomes_project 7 27654390 27659995 + MGP_129S1SvImJ_P0082684 Hnrnpl protein_coding protein_coding MGP_129S1SvImJ_T0082685.1 MGP_129S1SvImJ_G0031962.1 mouse_genomes_project 7 27655763 27666927 + MGP_129S1SvImJ_P0082685 Hnrnpl protein_coding protein_coding MGP_129S1SvImJ_T0082686.1 MGP_129S1SvImJ_G0031962.1 mouse_genomes_project 7 27655810 27666901 + MGP_129S1SvImJ_P0082686 Hnrnpl protein_coding protein_coding MGP_129S1SvImJ_T0082687.1 MGP_129S1SvImJ_G0031962.1 mouse_genomes_project 7 27655813 27661805 + Hnrnpl protein_coding retained_intron MGP_129S1SvImJ_T0082688.1 MGP_129S1SvImJ_G0031962.1 mouse_genomes_project 7 27658225 27666910 + MGP_129S1SvImJ_P0082688 Hnrnpl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082689.1 MGP_129S1SvImJ_G0031962.1 mouse_genomes_project 7 27658258 27659328 + Hnrnpl protein_coding retained_intron MGP_129S1SvImJ_T0082690.1 MGP_129S1SvImJ_G0031962.1 mouse_genomes_project 7 27659704 27663569 + Hnrnpl protein_coding retained_intron MGP_129S1SvImJ_T0082691.1 MGP_129S1SvImJ_G0031962.1 mouse_genomes_project 7 27659975 27665386 + Hnrnpl protein_coding retained_intron MGP_129S1SvImJ_T0082692.1 MGP_129S1SvImJ_G0031962.1 mouse_genomes_project 7 27662702 27663581 + Hnrnpl protein_coding retained_intron MGP_129S1SvImJ_T0082693.1 MGP_129S1SvImJ_G0031962.1 mouse_genomes_project 7 27665875 27666905 + Hnrnpl protein_coding retained_intron MGP_129S1SvImJ_T0082576.1 MGP_129S1SvImJ_G0031930.1 mouse_genomes_project 7 26855841 26858647 - MGP_129S1SvImJ_P0082576 protein_coding protein_coding MGP_129S1SvImJ_T0087652.1 MGP_129S1SvImJ_G0033238.1 mouse_genomes_project 7 146757357 146837286 + MGP_129S1SvImJ_P0087652 Ap2a2 protein_coding protein_coding MGP_129S1SvImJ_T0087653.1 MGP_129S1SvImJ_G0033238.1 mouse_genomes_project 7 146757392 146802622 + Ap2a2 protein_coding retained_intron MGP_129S1SvImJ_T0087654.1 MGP_129S1SvImJ_G0033238.1 mouse_genomes_project 7 146757714 146798322 + MGP_129S1SvImJ_P0087654 Ap2a2 protein_coding protein_coding MGP_129S1SvImJ_T0082008.1 MGP_129S1SvImJ_G0031778.1 mouse_genomes_project 7 17424536 17462219 - MGP_129S1SvImJ_P0082008 Mark4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0082009.1 MGP_129S1SvImJ_G0031778.1 mouse_genomes_project 7 17425478 17462219 - MGP_129S1SvImJ_P0082009 Mark4 protein_coding protein_coding MGP_129S1SvImJ_T0008818.1 MGP_129S1SvImJ_G0007123.1 mouse_genomes_project 7 17378593 17390612 - Gm26852 lincRNA lincRNA MGP_129S1SvImJ_T0087029.1 MGP_129S1SvImJ_G0033084.1 mouse_genomes_project 7 132958711 132983489 + MGP_129S1SvImJ_P0087029 Bag3 protein_coding protein_coding MGP_129S1SvImJ_T0002280.1 MGP_129S1SvImJ_G0002191.1 mouse_genomes_project 7 75335785 75335942 + TEC TEC MGP_129S1SvImJ_T0083522.1 MGP_129S1SvImJ_G0032155.1 mouse_genomes_project 7 44392552 44396740 + MGP_129S1SvImJ_P0083522 protein_coding protein_coding MGP_129S1SvImJ_T0083523.1 MGP_129S1SvImJ_G0032155.1 mouse_genomes_project 7 44392585 44394551 + protein_coding processed_transcript MGP_129S1SvImJ_T0083524.1 MGP_129S1SvImJ_G0032155.1 mouse_genomes_project 7 44392585 44396740 + MGP_129S1SvImJ_P0083524 protein_coding protein_coding MGP_129S1SvImJ_T0083525.1 MGP_129S1SvImJ_G0032155.1 mouse_genomes_project 7 44392595 44393965 + protein_coding processed_transcript MGP_129S1SvImJ_T0083526.1 MGP_129S1SvImJ_G0032155.1 mouse_genomes_project 7 44392597 44396740 + MGP_129S1SvImJ_P0083526 protein_coding protein_coding MGP_129S1SvImJ_T0083527.1 MGP_129S1SvImJ_G0032155.1 mouse_genomes_project 7 44392598 44395854 + protein_coding processed_transcript MGP_129S1SvImJ_T0083528.1 MGP_129S1SvImJ_G0032155.1 mouse_genomes_project 7 44392606 44396280 + protein_coding processed_transcript MGP_129S1SvImJ_T0083529.1 MGP_129S1SvImJ_G0032155.1 mouse_genomes_project 7 44392616 44396327 + protein_coding processed_transcript MGP_129S1SvImJ_T0083530.1 MGP_129S1SvImJ_G0032155.1 mouse_genomes_project 7 44393029 44396600 + MGP_129S1SvImJ_P0083530 protein_coding protein_coding MGP_129S1SvImJ_T0083531.1 MGP_129S1SvImJ_G0032155.1 mouse_genomes_project 7 44393240 44400056 + MGP_129S1SvImJ_P0083531 protein_coding protein_coding MGP_129S1SvImJ_T0083811.1 MGP_129S1SvImJ_G0032225.1 mouse_genomes_project 7 45739330 45760287 - MGP_129S1SvImJ_P0083811 Dhdh protein_coding protein_coding MGP_129S1SvImJ_T0083812.1 MGP_129S1SvImJ_G0032225.1 mouse_genomes_project 7 45743075 45750185 - Dhdh protein_coding processed_transcript MGP_129S1SvImJ_T0084313.1 MGP_129S1SvImJ_G0032352.1 mouse_genomes_project 7 67618898 67659077 - MGP_129S1SvImJ_P0084313 Aldh1a3 protein_coding protein_coding MGP_129S1SvImJ_T0084314.1 MGP_129S1SvImJ_G0032352.1 mouse_genomes_project 7 67627895 67634003 - Aldh1a3 protein_coding retained_intron MGP_129S1SvImJ_T0084315.1 MGP_129S1SvImJ_G0032352.1 mouse_genomes_project 7 67630049 67650780 - MGP_129S1SvImJ_P0084315 Aldh1a3 protein_coding protein_coding MGP_129S1SvImJ_T0084316.1 MGP_129S1SvImJ_G0032352.1 mouse_genomes_project 7 67636511 67658149 - Aldh1a3 protein_coding processed_transcript MGP_129S1SvImJ_T0084317.1 MGP_129S1SvImJ_G0032352.1 mouse_genomes_project 7 67639192 67657261 - Aldh1a3 protein_coding processed_transcript MGP_129S1SvImJ_T0101304.1 MGP_129S1SvImJ_G0039371.1 mouse_genomes_project 7 44395650 44395740 + Snord88c snoRNA snoRNA MGP_129S1SvImJ_T0087242.1 MGP_129S1SvImJ_G0033127.1 mouse_genomes_project 7 138649029 139001846 - MGP_129S1SvImJ_P0087242 Adam12 protein_coding protein_coding MGP_129S1SvImJ_T0087243.1 MGP_129S1SvImJ_G0033127.1 mouse_genomes_project 7 138652018 138730062 - MGP_129S1SvImJ_P0087243 Adam12 protein_coding protein_coding MGP_129S1SvImJ_T0087244.1 MGP_129S1SvImJ_G0033127.1 mouse_genomes_project 7 138746214 139008739 - MGP_129S1SvImJ_P0087244 Adam12 protein_coding protein_coding MGP_129S1SvImJ_T0087245.1 MGP_129S1SvImJ_G0033127.1 mouse_genomes_project 7 138752151 139008880 - MGP_129S1SvImJ_P0087245 Adam12 protein_coding protein_coding MGP_129S1SvImJ_T0087246.1 MGP_129S1SvImJ_G0033127.1 mouse_genomes_project 7 138941253 138943861 - Adam12 protein_coding retained_intron MGP_129S1SvImJ_T0087247.1 MGP_129S1SvImJ_G0033127.1 mouse_genomes_project 7 138964542 139002121 - Adam12 protein_coding processed_transcript MGP_129S1SvImJ_T0018451.1 MGP_129S1SvImJ_G0015690.1 mouse_genomes_project 7 131197901 131203516 + Gm20650 processed_transcript processed_transcript MGP_129S1SvImJ_T0087409.1 MGP_129S1SvImJ_G0033184.1 mouse_genomes_project 7 145755950 145756886 + MGP_129S1SvImJ_P0087409 Olfr61 protein_coding protein_coding MGP_129S1SvImJ_T0081740.1 MGP_129S1SvImJ_G0031700.1 mouse_genomes_project 7 13785774 13817512 + MGP_129S1SvImJ_P0081740 Slc8a2 protein_coding protein_coding MGP_129S1SvImJ_T0083657.1 MGP_129S1SvImJ_G0032180.1 mouse_genomes_project 7 45048931 45056938 - Tbc1d17 protein_coding retained_intron MGP_129S1SvImJ_T0083658.1 MGP_129S1SvImJ_G0032180.1 mouse_genomes_project 7 45049051 45057102 - MGP_129S1SvImJ_P0083658 Tbc1d17 protein_coding protein_coding MGP_129S1SvImJ_T0083659.1 MGP_129S1SvImJ_G0032180.1 mouse_genomes_project 7 45049058 45057106 - MGP_129S1SvImJ_P0083659 Tbc1d17 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083660.1 MGP_129S1SvImJ_G0032180.1 mouse_genomes_project 7 45049059 45056917 - Tbc1d17 protein_coding retained_intron MGP_129S1SvImJ_T0083661.1 MGP_129S1SvImJ_G0032180.1 mouse_genomes_project 7 45051406 45052351 - Tbc1d17 protein_coding retained_intron MGP_129S1SvImJ_T0083662.1 MGP_129S1SvImJ_G0032180.1 mouse_genomes_project 7 45052603 45054027 - Tbc1d17 protein_coding retained_intron MGP_129S1SvImJ_T0083663.1 MGP_129S1SvImJ_G0032180.1 mouse_genomes_project 7 45056052 45056922 - Tbc1d17 protein_coding retained_intron MGP_129S1SvImJ_T0083664.1 MGP_129S1SvImJ_G0032180.1 mouse_genomes_project 7 45056301 45056621 - Tbc1d17 protein_coding retained_intron MGP_129S1SvImJ_T0015878.1 MGP_129S1SvImJ_G0013967.1 mouse_genomes_project 7 100302054 100302562 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085549.1 MGP_129S1SvImJ_G0032709.1 mouse_genomes_project 7 107470343 107490959 - protein_coding processed_transcript MGP_129S1SvImJ_T0085550.1 MGP_129S1SvImJ_G0032709.1 mouse_genomes_project 7 107470346 107504606 - MGP_129S1SvImJ_P0085550 protein_coding protein_coding MGP_129S1SvImJ_T0085551.1 MGP_129S1SvImJ_G0032709.1 mouse_genomes_project 7 107470346 107504607 - MGP_129S1SvImJ_P0085551 protein_coding protein_coding MGP_129S1SvImJ_T0085562.1 MGP_129S1SvImJ_G0032709.1 mouse_genomes_project 7 107493319 107504614 - MGP_129S1SvImJ_P0085562 protein_coding protein_coding MGP_129S1SvImJ_T0085564.1 MGP_129S1SvImJ_G0032709.1 mouse_genomes_project 7 107497098 107504494 - protein_coding processed_transcript MGP_129S1SvImJ_T0085565.1 MGP_129S1SvImJ_G0032709.1 mouse_genomes_project 7 107497980 107504617 - protein_coding retained_intron MGP_129S1SvImJ_T0101356.1 MGP_129S1SvImJ_G0039423.1 mouse_genomes_project 7 139967846 139967979 - Gm24581 snoRNA snoRNA MGP_129S1SvImJ_T0083386.1 MGP_129S1SvImJ_G0032105.1 mouse_genomes_project 7 40548380 40581304 + MGP_129S1SvImJ_P0083386 Vstm2b protein_coding protein_coding MGP_129S1SvImJ_T0083387.1 MGP_129S1SvImJ_G0032105.1 mouse_genomes_project 7 40549330 40580678 + MGP_129S1SvImJ_P0083387 Vstm2b protein_coding protein_coding MGP_129S1SvImJ_T0083388.1 MGP_129S1SvImJ_G0032105.1 mouse_genomes_project 7 40549384 40552841 + MGP_129S1SvImJ_P0083388 Vstm2b protein_coding protein_coding MGP_129S1SvImJ_T0083389.1 MGP_129S1SvImJ_G0032105.1 mouse_genomes_project 7 40550181 40552854 + MGP_129S1SvImJ_P0083389 Vstm2b protein_coding protein_coding MGP_129S1SvImJ_T0084791.1 MGP_129S1SvImJ_G0032441.1 mouse_genomes_project 7 84063807 84089416 - MGP_129S1SvImJ_P0084791 Bnc1 protein_coding protein_coding MGP_129S1SvImJ_T0087324.1 MGP_129S1SvImJ_G0033152.1 mouse_genomes_project 7 144633161 144732740 - MGP_129S1SvImJ_P0087324 protein_coding protein_coding MGP_129S1SvImJ_T0087325.1 MGP_129S1SvImJ_G0033152.1 mouse_genomes_project 7 144633161 144638991 - MGP_129S1SvImJ_P0087325 protein_coding protein_coding MGP_129S1SvImJ_T0087326.1 MGP_129S1SvImJ_G0033152.1 mouse_genomes_project 7 144633161 144650552 - MGP_129S1SvImJ_P0087326 protein_coding protein_coding MGP_129S1SvImJ_T0087327.1 MGP_129S1SvImJ_G0033152.1 mouse_genomes_project 7 144633290 144650532 - protein_coding retained_intron MGP_129S1SvImJ_T0087328.1 MGP_129S1SvImJ_G0033152.1 mouse_genomes_project 7 144646188 144650552 - protein_coding retained_intron MGP_129S1SvImJ_T0087329.1 MGP_129S1SvImJ_G0033152.1 mouse_genomes_project 7 144682789 144732740 - MGP_129S1SvImJ_P0087329 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087330.1 MGP_129S1SvImJ_G0033152.1 mouse_genomes_project 7 144682789 144706493 - MGP_129S1SvImJ_P0087330 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087331.1 MGP_129S1SvImJ_G0033152.1 mouse_genomes_project 7 144689738 144732740 - protein_coding retained_intron MGP_129S1SvImJ_T0087332.1 MGP_129S1SvImJ_G0033152.1 mouse_genomes_project 7 144724830 144732740 - MGP_129S1SvImJ_P0087332 protein_coding protein_coding MGP_129S1SvImJ_T0087333.1 MGP_129S1SvImJ_G0033152.1 mouse_genomes_project 7 144727191 144732740 - protein_coding retained_intron MGP_129S1SvImJ_T0081500.1 MGP_129S1SvImJ_G0031596.1 mouse_genomes_project 7 3260919 3282384 + MGP_129S1SvImJ_P0081500 Galp protein_coding protein_coding MGP_129S1SvImJ_T0081501.1 MGP_129S1SvImJ_G0031596.1 mouse_genomes_project 7 3268396 3277705 + Galp protein_coding processed_transcript MGP_129S1SvImJ_T0082499.1 MGP_129S1SvImJ_G0031910.1 mouse_genomes_project 7 25999177 26100307 - MGP_129S1SvImJ_P0082499 Sptbn4 protein_coding protein_coding MGP_129S1SvImJ_T0082500.1 MGP_129S1SvImJ_G0031910.1 mouse_genomes_project 7 25999177 26042314 - MGP_129S1SvImJ_P0082500 Sptbn4 protein_coding protein_coding MGP_129S1SvImJ_T0082501.1 MGP_129S1SvImJ_G0031910.1 mouse_genomes_project 7 25999177 26046429 - MGP_129S1SvImJ_P0082501 Sptbn4 protein_coding protein_coding MGP_129S1SvImJ_T0082502.1 MGP_129S1SvImJ_G0031910.1 mouse_genomes_project 7 25999177 26044018 - MGP_129S1SvImJ_P0082502 Sptbn4 protein_coding protein_coding MGP_129S1SvImJ_T0082503.1 MGP_129S1SvImJ_G0031910.1 mouse_genomes_project 7 25999181 26101378 - MGP_129S1SvImJ_P0082503 Sptbn4 protein_coding protein_coding MGP_129S1SvImJ_T0082504.1 MGP_129S1SvImJ_G0031910.1 mouse_genomes_project 7 26084742 26101378 - MGP_129S1SvImJ_P0082504 Sptbn4 protein_coding protein_coding MGP_129S1SvImJ_T0082505.1 MGP_129S1SvImJ_G0031910.1 mouse_genomes_project 7 26099660 26100225 - Sptbn4 protein_coding processed_transcript MGP_129S1SvImJ_T0101335.1 MGP_129S1SvImJ_G0039402.1 mouse_genomes_project 7 102279759 102279904 - Snord15b snoRNA snoRNA MGP_129S1SvImJ_T0008937.1 MGP_129S1SvImJ_G0007217.1 mouse_genomes_project 7 76673646 76719032 + Gm44904 lincRNA lincRNA MGP_129S1SvImJ_T0087407.1 MGP_129S1SvImJ_G0033182.1 mouse_genomes_project 7 145671641 145672619 + MGP_129S1SvImJ_P0087407 Olfr538 protein_coding protein_coding MGP_129S1SvImJ_T0098643.1 MGP_129S1SvImJ_G0036728.1 mouse_genomes_project 7 136739324 136739444 + n-R5s159 rRNA rRNA MGP_129S1SvImJ_T0081875.1 MGP_129S1SvImJ_G0031741.1 mouse_genomes_project 7 16595446 16600652 - MGP_129S1SvImJ_P0081875 Psg20 protein_coding protein_coding MGP_129S1SvImJ_T0087404.1 MGP_129S1SvImJ_G0033179.1 mouse_genomes_project 7 145559219 145561938 + MGP_129S1SvImJ_P0087404 Olfr533 protein_coding protein_coding MGP_129S1SvImJ_T0102723.1 MGP_129S1SvImJ_G0040555.1 mouse_genomes_project 7 32761087 32762273 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085184.1 MGP_129S1SvImJ_G0032563.1 mouse_genomes_project 7 103023169 103025195 + MGP_129S1SvImJ_P0085184 Lipt2 protein_coding protein_coding MGP_129S1SvImJ_T0100091.1 MGP_129S1SvImJ_G0038158.1 mouse_genomes_project 7 130846541 130846647 - Gm25579 snRNA snRNA MGP_129S1SvImJ_T0086923.1 MGP_129S1SvImJ_G0033065.1 mouse_genomes_project 7 132315248 132319637 - MGP_129S1SvImJ_P0086923 Prss8 protein_coding protein_coding MGP_129S1SvImJ_T0086924.1 MGP_129S1SvImJ_G0033065.1 mouse_genomes_project 7 132315248 132319637 - MGP_129S1SvImJ_P0086924 Prss8 protein_coding protein_coding MGP_129S1SvImJ_T0086925.1 MGP_129S1SvImJ_G0033065.1 mouse_genomes_project 7 132316294 132319628 - MGP_129S1SvImJ_P0086925 Prss8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0100044.1 MGP_129S1SvImJ_G0038111.1 mouse_genomes_project 7 14725455 14725594 - Gm25815 snRNA snRNA MGP_129S1SvImJ_T0009037.1 MGP_129S1SvImJ_G0007274.1 mouse_genomes_project 7 131383955 131387698 + Gm44939 lincRNA lincRNA MGP_129S1SvImJ_T0082643.1 MGP_129S1SvImJ_G0031952.1 mouse_genomes_project 7 27348635 27354798 - MGP_129S1SvImJ_P0082643 Nccrp1 protein_coding protein_coding MGP_129S1SvImJ_T0083210.1 MGP_129S1SvImJ_G0032074.1 mouse_genomes_project 7 33459150 33489407 - MGP_129S1SvImJ_P0083210 Gpi1 protein_coding protein_coding MGP_129S1SvImJ_T0083211.1 MGP_129S1SvImJ_G0032074.1 mouse_genomes_project 7 33459979 33468211 - Gpi1 protein_coding retained_intron MGP_129S1SvImJ_T0083212.1 MGP_129S1SvImJ_G0032074.1 mouse_genomes_project 7 33460026 33465735 - MGP_129S1SvImJ_P0083212 Gpi1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083213.1 MGP_129S1SvImJ_G0032074.1 mouse_genomes_project 7 33460203 33471288 - MGP_129S1SvImJ_P0083213 Gpi1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083214.1 MGP_129S1SvImJ_G0032074.1 mouse_genomes_project 7 33460227 33486698 - MGP_129S1SvImJ_P0083214 Gpi1 protein_coding protein_coding MGP_129S1SvImJ_T0083215.1 MGP_129S1SvImJ_G0032074.1 mouse_genomes_project 7 33460509 33489328 - MGP_129S1SvImJ_P0083215 Gpi1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083216.1 MGP_129S1SvImJ_G0032074.1 mouse_genomes_project 7 33460635 33464103 - Gpi1 protein_coding retained_intron MGP_129S1SvImJ_T0083217.1 MGP_129S1SvImJ_G0032074.1 mouse_genomes_project 7 33461878 33489313 - MGP_129S1SvImJ_P0083217 Gpi1 protein_coding protein_coding MGP_129S1SvImJ_T0083218.1 MGP_129S1SvImJ_G0032074.1 mouse_genomes_project 7 33473060 33489334 - Gpi1 protein_coding retained_intron MGP_129S1SvImJ_T0083219.1 MGP_129S1SvImJ_G0032074.1 mouse_genomes_project 7 33484824 33488853 - Gpi1 protein_coding processed_transcript MGP_129S1SvImJ_T0083220.1 MGP_129S1SvImJ_G0032074.1 mouse_genomes_project 7 33488211 33489360 - Gpi1 protein_coding retained_intron MGP_129S1SvImJ_T0083032.1 MGP_129S1SvImJ_G0032041.1 mouse_genomes_project 7 29736563 29738397 - MGP_129S1SvImJ_P0083032 Tmem147 protein_coding protein_coding MGP_129S1SvImJ_T0084848.1 MGP_129S1SvImJ_G0032457.1 mouse_genomes_project 7 86288572 86331107 - MGP_129S1SvImJ_P0084848 Abhd17c protein_coding protein_coding MGP_129S1SvImJ_T0084849.1 MGP_129S1SvImJ_G0032457.1 mouse_genomes_project 7 86293462 86327028 - Abhd17c protein_coding processed_transcript MGP_129S1SvImJ_T0010864.1 MGP_129S1SvImJ_G0008980.1 mouse_genomes_project 7 23386236 23386302 - Mir7046 miRNA miRNA MGP_129S1SvImJ_T0102706.1 MGP_129S1SvImJ_G0040539.1 mouse_genomes_project 7 12136955 12137433 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0083733.1 MGP_129S1SvImJ_G0032204.1 mouse_genomes_project 7 45389692 45396920 + MGP_129S1SvImJ_P0083733 Pih1d1 protein_coding protein_coding MGP_129S1SvImJ_T0083734.1 MGP_129S1SvImJ_G0032204.1 mouse_genomes_project 7 45392790 45396920 + MGP_129S1SvImJ_P0083734 Pih1d1 protein_coding protein_coding MGP_129S1SvImJ_T0086962.1 MGP_129S1SvImJ_G0033072.1 mouse_genomes_project 7 132534285 132556840 + MGP_129S1SvImJ_P0086962 Itgax protein_coding protein_coding MGP_129S1SvImJ_T0086963.1 MGP_129S1SvImJ_G0033072.1 mouse_genomes_project 7 132534289 132539203 + MGP_129S1SvImJ_P0086963 Itgax protein_coding protein_coding MGP_129S1SvImJ_T0086964.1 MGP_129S1SvImJ_G0033072.1 mouse_genomes_project 7 132539907 132540614 + Itgax protein_coding retained_intron MGP_129S1SvImJ_T0086965.1 MGP_129S1SvImJ_G0033072.1 mouse_genomes_project 7 132553640 132554390 + Itgax protein_coding retained_intron MGP_129S1SvImJ_T0015930.1 MGP_129S1SvImJ_G0014019.1 mouse_genomes_project 7 133034926 133035216 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0083990.1 MGP_129S1SvImJ_G0032272.1 mouse_genomes_project 7 47156450 47193478 - MGP_129S1SvImJ_P0083990 Hps5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083991.1 MGP_129S1SvImJ_G0032272.1 mouse_genomes_project 7 47156450 47193827 - MGP_129S1SvImJ_P0083991 Hps5 protein_coding protein_coding MGP_129S1SvImJ_T0083992.1 MGP_129S1SvImJ_G0032272.1 mouse_genomes_project 7 47156450 47193799 - MGP_129S1SvImJ_P0083992 Hps5 protein_coding protein_coding MGP_129S1SvImJ_T0083993.1 MGP_129S1SvImJ_G0032272.1 mouse_genomes_project 7 47156456 47193681 - MGP_129S1SvImJ_P0083993 Hps5 protein_coding protein_coding MGP_129S1SvImJ_T0083994.1 MGP_129S1SvImJ_G0032272.1 mouse_genomes_project 7 47156963 47193478 - Hps5 protein_coding retained_intron MGP_129S1SvImJ_T0083995.1 MGP_129S1SvImJ_G0032272.1 mouse_genomes_project 7 47157224 47165974 - Hps5 protein_coding processed_transcript MGP_129S1SvImJ_T0083996.1 MGP_129S1SvImJ_G0032272.1 mouse_genomes_project 7 47158928 47171856 - MGP_129S1SvImJ_P0083996 Hps5 protein_coding protein_coding MGP_129S1SvImJ_T0083997.1 MGP_129S1SvImJ_G0032272.1 mouse_genomes_project 7 47161855 47168927 - MGP_129S1SvImJ_P0083997 Hps5 protein_coding protein_coding MGP_129S1SvImJ_T0083998.1 MGP_129S1SvImJ_G0032272.1 mouse_genomes_project 7 47163935 47165417 - Hps5 protein_coding retained_intron MGP_129S1SvImJ_T0083999.1 MGP_129S1SvImJ_G0032272.1 mouse_genomes_project 7 47172778 47175362 - Hps5 protein_coding retained_intron MGP_129S1SvImJ_T0084000.1 MGP_129S1SvImJ_G0032272.1 mouse_genomes_project 7 47183453 47193864 - MGP_129S1SvImJ_P0084000 Hps5 protein_coding protein_coding MGP_129S1SvImJ_T0084001.1 MGP_129S1SvImJ_G0032272.1 mouse_genomes_project 7 47186099 47193503 - MGP_129S1SvImJ_P0084001 Hps5 protein_coding protein_coding MGP_129S1SvImJ_T0084002.1 MGP_129S1SvImJ_G0032272.1 mouse_genomes_project 7 47186881 47188884 - Hps5 protein_coding processed_transcript MGP_129S1SvImJ_T0002257.1 MGP_129S1SvImJ_G0002169.1 mouse_genomes_project 7 56076153 56078377 + TEC TEC MGP_129S1SvImJ_T0083157.1 MGP_129S1SvImJ_G0032061.1 mouse_genomes_project 7 30160777 30174629 - MGP_129S1SvImJ_P0083157 Hpn protein_coding protein_coding MGP_129S1SvImJ_T0083158.1 MGP_129S1SvImJ_G0032061.1 mouse_genomes_project 7 30160777 30178861 - MGP_129S1SvImJ_P0083158 Hpn protein_coding protein_coding MGP_129S1SvImJ_T0083159.1 MGP_129S1SvImJ_G0032061.1 mouse_genomes_project 7 30160777 30178854 - MGP_129S1SvImJ_P0083159 Hpn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083160.1 MGP_129S1SvImJ_G0032061.1 mouse_genomes_project 7 30160777 30178869 - MGP_129S1SvImJ_P0083160 Hpn protein_coding protein_coding MGP_129S1SvImJ_T0083161.1 MGP_129S1SvImJ_G0032061.1 mouse_genomes_project 7 30160781 30164551 - MGP_129S1SvImJ_P0083161 Hpn protein_coding protein_coding MGP_129S1SvImJ_T0083162.1 MGP_129S1SvImJ_G0032061.1 mouse_genomes_project 7 30160785 30161338 - MGP_129S1SvImJ_P0083162 Hpn protein_coding protein_coding MGP_129S1SvImJ_T0083163.1 MGP_129S1SvImJ_G0032061.1 mouse_genomes_project 7 30161290 30162336 - Hpn protein_coding retained_intron MGP_129S1SvImJ_T0083164.1 MGP_129S1SvImJ_G0032061.1 mouse_genomes_project 7 30164228 30165243 - Hpn protein_coding retained_intron MGP_129S1SvImJ_T0083165.1 MGP_129S1SvImJ_G0032061.1 mouse_genomes_project 7 30164534 30165516 - Hpn protein_coding retained_intron MGP_129S1SvImJ_T0083166.1 MGP_129S1SvImJ_G0032061.1 mouse_genomes_project 7 30172786 30175590 - MGP_129S1SvImJ_P0083166 Hpn protein_coding protein_coding MGP_129S1SvImJ_T0083167.1 MGP_129S1SvImJ_G0032061.1 mouse_genomes_project 7 30174197 30174641 - Hpn protein_coding retained_intron MGP_129S1SvImJ_T0011719.1 MGP_129S1SvImJ_G0009835.1 mouse_genomes_project 7 147837810 147837881 + Gm27483 misc_RNA misc_RNA MGP_129S1SvImJ_T0082641.1 MGP_129S1SvImJ_G0031950.1 mouse_genomes_project 7 27339773 27340472 + MGP_129S1SvImJ_P0082641 Gm10053 protein_coding protein_coding MGP_129S1SvImJ_T0100079.1 MGP_129S1SvImJ_G0038146.1 mouse_genomes_project 7 113220851 113220958 - Gm22822 snRNA snRNA MGP_129S1SvImJ_T0084886.1 MGP_129S1SvImJ_G0032487.1 mouse_genomes_project 7 89292646 89347830 + MGP_129S1SvImJ_P0084886 protein_coding protein_coding MGP_129S1SvImJ_T0101311.1 MGP_129S1SvImJ_G0039378.1 mouse_genomes_project 7 45362659 45362742 - Snord32a snoRNA snoRNA MGP_129S1SvImJ_T0086236.1 MGP_129S1SvImJ_G0032936.1 mouse_genomes_project 7 124971216 124996002 - Cdr2 protein_coding processed_transcript MGP_129S1SvImJ_T0086237.1 MGP_129S1SvImJ_G0032936.1 mouse_genomes_project 7 124971216 124996524 - MGP_129S1SvImJ_P0086237 Cdr2 protein_coding protein_coding MGP_129S1SvImJ_T0081588.1 MGP_129S1SvImJ_G0031649.1 mouse_genomes_project 7 10089242 10123789 - MGP_129S1SvImJ_P0081588 protein_coding protein_coding MGP_129S1SvImJ_T0015886.1 MGP_129S1SvImJ_G0013975.1 mouse_genomes_project 7 103137604 103137907 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008885.1 MGP_129S1SvImJ_G0007177.1 mouse_genomes_project 7 64407946 64504455 - 4930554H23Rik lincRNA lincRNA MGP_129S1SvImJ_T0015844.1 MGP_129S1SvImJ_G0013933.1 mouse_genomes_project 7 75278912 75279278 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085783.1 MGP_129S1SvImJ_G0032826.1 mouse_genomes_project 7 112028717 112029792 - MGP_129S1SvImJ_P0085783 Olfr509 protein_coding protein_coding MGP_129S1SvImJ_T0085537.1 MGP_129S1SvImJ_G0032704.1 mouse_genomes_project 7 107371790 107374088 - MGP_129S1SvImJ_P0085537 Ubqlnl protein_coding protein_coding MGP_129S1SvImJ_T0084241.1 MGP_129S1SvImJ_G0032337.1 mouse_genomes_project 7 65516009 65533729 - MGP_129S1SvImJ_P0084241 Mphosph10 protein_coding protein_coding MGP_129S1SvImJ_T0084242.1 MGP_129S1SvImJ_G0032337.1 mouse_genomes_project 7 65516758 65525984 - Mphosph10 protein_coding retained_intron MGP_129S1SvImJ_T0084243.1 MGP_129S1SvImJ_G0032337.1 mouse_genomes_project 7 65529449 65533697 - Mphosph10 protein_coding retained_intron MGP_129S1SvImJ_T0010846.1 MGP_129S1SvImJ_G0008962.1 mouse_genomes_project 7 96650 96730 + Mir293 miRNA miRNA MGP_129S1SvImJ_T0082433.1 MGP_129S1SvImJ_G0031897.1 mouse_genomes_project 7 25772521 25780665 - MGP_129S1SvImJ_P0082433 Egln2 protein_coding protein_coding MGP_129S1SvImJ_T0082434.1 MGP_129S1SvImJ_G0031897.1 mouse_genomes_project 7 25772522 25774734 - Egln2 protein_coding processed_transcript MGP_129S1SvImJ_T0082435.1 MGP_129S1SvImJ_G0031897.1 mouse_genomes_project 7 25772851 25780276 - MGP_129S1SvImJ_P0082435 Egln2 protein_coding protein_coding MGP_129S1SvImJ_T0082436.1 MGP_129S1SvImJ_G0031897.1 mouse_genomes_project 7 25779395 25780145 - Egln2 protein_coding processed_transcript MGP_129S1SvImJ_T0085603.1 MGP_129S1SvImJ_G0032741.1 mouse_genomes_project 7 108367909 108370059 - MGP_129S1SvImJ_P0085603 protein_coding protein_coding MGP_129S1SvImJ_T0005291.1 MGP_129S1SvImJ_G0004493.1 mouse_genomes_project 7 117172323 117199419 - Far1os antisense antisense MGP_129S1SvImJ_T0005292.1 MGP_129S1SvImJ_G0004493.1 mouse_genomes_project 7 117181094 117208031 - Far1os antisense antisense MGP_129S1SvImJ_T0015941.1 MGP_129S1SvImJ_G0014030.1 mouse_genomes_project 7 145914140 145914627 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101329.1 MGP_129S1SvImJ_G0039396.1 mouse_genomes_project 7 84062858 84062983 + Gm25907 snoRNA snoRNA MGP_129S1SvImJ_T0010860.1 MGP_129S1SvImJ_G0008976.1 mouse_genomes_project 7 17146926 17147024 + Mir330 miRNA miRNA MGP_129S1SvImJ_T0085466.1 MGP_129S1SvImJ_G0032637.1 mouse_genomes_project 7 106056337 106057279 - MGP_129S1SvImJ_P0085466 Olfr578 protein_coding protein_coding MGP_129S1SvImJ_T0008998.1 MGP_129S1SvImJ_G0007252.1 mouse_genomes_project 7 118538819 118542047 - Gm45017 lincRNA lincRNA MGP_129S1SvImJ_T0098999.1 MGP_129S1SvImJ_G0037073.1 mouse_genomes_project 7 73673194 73674234 - sense_intronic sense_intronic MGP_129S1SvImJ_T0102669.1 MGP_129S1SvImJ_G0040502.1 mouse_genomes_project 7 7611537 7642796 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0005266.1 MGP_129S1SvImJ_G0004477.1 mouse_genomes_project 7 85823128 85824517 + 2310044K18Rik antisense antisense MGP_129S1SvImJ_T0082418.1 MGP_129S1SvImJ_G0031889.1 mouse_genomes_project 7 25251205 25272447 - MGP_129S1SvImJ_P0082418 Cyp2b23 protein_coding protein_coding MGP_129S1SvImJ_T0085433.1 MGP_129S1SvImJ_G0032607.1 mouse_genomes_project 7 105313998 105492464 + MGP_129S1SvImJ_P0085433 Stim1 protein_coding protein_coding MGP_129S1SvImJ_T0084074.1 MGP_129S1SvImJ_G0032300.1 mouse_genomes_project 7 50457336 50543354 + MGP_129S1SvImJ_P0084074 Prmt3 protein_coding protein_coding MGP_129S1SvImJ_T0084075.1 MGP_129S1SvImJ_G0032300.1 mouse_genomes_project 7 50457336 50463321 + MGP_129S1SvImJ_P0084075 Prmt3 protein_coding protein_coding MGP_129S1SvImJ_T0084076.1 MGP_129S1SvImJ_G0032300.1 mouse_genomes_project 7 50457427 50462979 + Prmt3 protein_coding processed_transcript MGP_129S1SvImJ_T0084077.1 MGP_129S1SvImJ_G0032300.1 mouse_genomes_project 7 50457427 50511310 + MGP_129S1SvImJ_P0084077 Prmt3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084078.1 MGP_129S1SvImJ_G0032300.1 mouse_genomes_project 7 50457429 50459635 + Prmt3 protein_coding processed_transcript MGP_129S1SvImJ_T0084079.1 MGP_129S1SvImJ_G0032300.1 mouse_genomes_project 7 50457534 50468149 + Prmt3 protein_coding processed_transcript MGP_129S1SvImJ_T0084080.1 MGP_129S1SvImJ_G0032300.1 mouse_genomes_project 7 50458868 50468179 + MGP_129S1SvImJ_P0084080 Prmt3 protein_coding protein_coding MGP_129S1SvImJ_T0084081.1 MGP_129S1SvImJ_G0032300.1 mouse_genomes_project 7 50480145 50511506 + MGP_129S1SvImJ_P0084081 Prmt3 protein_coding protein_coding MGP_129S1SvImJ_T0085607.1 MGP_129S1SvImJ_G0032745.1 mouse_genomes_project 7 108562653 108563676 + MGP_129S1SvImJ_P0085607 protein_coding protein_coding MGP_129S1SvImJ_T0002317.1 MGP_129S1SvImJ_G0002228.1 mouse_genomes_project 7 126162725 126165401 + TEC TEC MGP_129S1SvImJ_T0082520.1 MGP_129S1SvImJ_G0031916.1 mouse_genomes_project 7 26195285 26217452 - MGP_129S1SvImJ_P0082520 Pld3 protein_coding protein_coding MGP_129S1SvImJ_T0082521.1 MGP_129S1SvImJ_G0031916.1 mouse_genomes_project 7 26195285 26217446 - MGP_129S1SvImJ_P0082521 Pld3 protein_coding protein_coding MGP_129S1SvImJ_T0082522.1 MGP_129S1SvImJ_G0031916.1 mouse_genomes_project 7 26195480 26196032 - Pld3 protein_coding retained_intron MGP_129S1SvImJ_T0082523.1 MGP_129S1SvImJ_G0031916.1 mouse_genomes_project 7 26196739 26201111 - Pld3 protein_coding retained_intron MGP_129S1SvImJ_T0082524.1 MGP_129S1SvImJ_G0031916.1 mouse_genomes_project 7 26202821 26217250 - MGP_129S1SvImJ_P0082524 Pld3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082525.1 MGP_129S1SvImJ_G0031916.1 mouse_genomes_project 7 26204391 26217418 - MGP_129S1SvImJ_P0082525 Pld3 protein_coding protein_coding MGP_129S1SvImJ_T0082526.1 MGP_129S1SvImJ_G0031916.1 mouse_genomes_project 7 26204926 26205928 - MGP_129S1SvImJ_P0082526 Pld3 protein_coding protein_coding MGP_129S1SvImJ_T0082527.1 MGP_129S1SvImJ_G0031916.1 mouse_genomes_project 7 26205998 26217385 - Pld3 protein_coding processed_transcript MGP_129S1SvImJ_T0081655.1 MGP_129S1SvImJ_G0031670.1 mouse_genomes_project 7 10652932 10672656 - MGP_129S1SvImJ_P0081655 6330408A02Rik protein_coding protein_coding MGP_129S1SvImJ_T0081656.1 MGP_129S1SvImJ_G0031670.1 mouse_genomes_project 7 10652932 10672117 - MGP_129S1SvImJ_P0081656 6330408A02Rik protein_coding protein_coding MGP_129S1SvImJ_T0081657.1 MGP_129S1SvImJ_G0031670.1 mouse_genomes_project 7 10652933 10672694 - MGP_129S1SvImJ_P0081657 6330408A02Rik protein_coding protein_coding MGP_129S1SvImJ_T0081658.1 MGP_129S1SvImJ_G0031670.1 mouse_genomes_project 7 10659699 10672694 - 6330408A02Rik protein_coding retained_intron MGP_129S1SvImJ_T0081659.1 MGP_129S1SvImJ_G0031670.1 mouse_genomes_project 7 10667218 10672643 - 6330408A02Rik protein_coding retained_intron MGP_129S1SvImJ_T0081660.1 MGP_129S1SvImJ_G0031670.1 mouse_genomes_project 7 10667327 10672395 - 6330408A02Rik protein_coding retained_intron MGP_129S1SvImJ_T0081661.1 MGP_129S1SvImJ_G0031670.1 mouse_genomes_project 7 10671252 10672635 - MGP_129S1SvImJ_P0081661 6330408A02Rik protein_coding protein_coding MGP_129S1SvImJ_T0101302.1 MGP_129S1SvImJ_G0039369.1 mouse_genomes_project 7 34576525 34576651 + Gm24505 snoRNA snoRNA MGP_129S1SvImJ_T0083390.1 MGP_129S1SvImJ_G0032106.1 mouse_genomes_project 7 40650144 40652060 + MGP_129S1SvImJ_P0083390 protein_coding protein_coding MGP_129S1SvImJ_T0005293.1 MGP_129S1SvImJ_G0004494.1 mouse_genomes_project 7 119717930 119738143 + Gm45025 antisense antisense MGP_129S1SvImJ_T0083629.1 MGP_129S1SvImJ_G0032173.1 mouse_genomes_project 7 44787072 44852150 - MGP_129S1SvImJ_P0083629 protein_coding protein_coding MGP_129S1SvImJ_T0084881.1 MGP_129S1SvImJ_G0032483.1 mouse_genomes_project 7 88936559 88937570 + MGP_129S1SvImJ_P0084881 Olfr293 protein_coding protein_coding MGP_129S1SvImJ_T0084874.1 MGP_129S1SvImJ_G0032477.1 mouse_genomes_project 7 88667147 88678214 + MGP_129S1SvImJ_P0084874 Olfr301 protein_coding protein_coding MGP_129S1SvImJ_T0010841.1 MGP_129S1SvImJ_G0008957.1 mouse_genomes_project 7 95028 95086 - Mir290b miRNA miRNA MGP_129S1SvImJ_T0085942.1 MGP_129S1SvImJ_G0032871.1 mouse_genomes_project 7 116274488 116519391 + MGP_129S1SvImJ_P0085942 Tead1 protein_coding protein_coding MGP_129S1SvImJ_T0085943.1 MGP_129S1SvImJ_G0032871.1 mouse_genomes_project 7 116274525 116508701 + MGP_129S1SvImJ_P0085943 Tead1 protein_coding protein_coding MGP_129S1SvImJ_T0085944.1 MGP_129S1SvImJ_G0032871.1 mouse_genomes_project 7 116274678 116443465 + Tead1 protein_coding retained_intron MGP_129S1SvImJ_T0085945.1 MGP_129S1SvImJ_G0032871.1 mouse_genomes_project 7 116342492 116507371 + MGP_129S1SvImJ_P0085945 Tead1 protein_coding protein_coding MGP_129S1SvImJ_T0085946.1 MGP_129S1SvImJ_G0032871.1 mouse_genomes_project 7 116356801 116507371 + MGP_129S1SvImJ_P0085946 Tead1 protein_coding protein_coding MGP_129S1SvImJ_T0085947.1 MGP_129S1SvImJ_G0032871.1 mouse_genomes_project 7 116359784 116408392 + Tead1 protein_coding processed_transcript MGP_129S1SvImJ_T0085948.1 MGP_129S1SvImJ_G0032871.1 mouse_genomes_project 7 116359835 116507371 + MGP_129S1SvImJ_P0085948 Tead1 protein_coding protein_coding MGP_129S1SvImJ_T0085949.1 MGP_129S1SvImJ_G0032871.1 mouse_genomes_project 7 116359880 116507371 + MGP_129S1SvImJ_P0085949 Tead1 protein_coding protein_coding MGP_129S1SvImJ_T0085950.1 MGP_129S1SvImJ_G0032871.1 mouse_genomes_project 7 116359880 116507371 + MGP_129S1SvImJ_P0085950 Tead1 protein_coding protein_coding MGP_129S1SvImJ_T0085951.1 MGP_129S1SvImJ_G0032871.1 mouse_genomes_project 7 116359880 116507371 + MGP_129S1SvImJ_P0085951 Tead1 protein_coding protein_coding MGP_129S1SvImJ_T0085952.1 MGP_129S1SvImJ_G0032871.1 mouse_genomes_project 7 116359933 116470230 + MGP_129S1SvImJ_P0085952 Tead1 protein_coding protein_coding MGP_129S1SvImJ_T0085953.1 MGP_129S1SvImJ_G0032871.1 mouse_genomes_project 7 116359943 116443444 + Tead1 protein_coding retained_intron MGP_129S1SvImJ_T0084771.1 MGP_129S1SvImJ_G0032435.1 mouse_genomes_project 7 83846374 83852666 + MGP_129S1SvImJ_P0084771 protein_coding protein_coding MGP_129S1SvImJ_T0085593.1 MGP_129S1SvImJ_G0032731.1 mouse_genomes_project 7 108106561 108107518 - MGP_129S1SvImJ_P0085593 Olfr668 protein_coding protein_coding MGP_129S1SvImJ_T0015847.1 MGP_129S1SvImJ_G0013936.1 mouse_genomes_project 7 76531128 76531931 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015860.1 MGP_129S1SvImJ_G0013949.1 mouse_genomes_project 7 87012746 87013087 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082829.1 MGP_129S1SvImJ_G0031995.1 mouse_genomes_project 7 28928827 28974954 + MGP_129S1SvImJ_P0082829 Zfp568 protein_coding protein_coding MGP_129S1SvImJ_T0082830.1 MGP_129S1SvImJ_G0031995.1 mouse_genomes_project 7 28930159 28978125 + MGP_129S1SvImJ_P0082830 Zfp568 protein_coding protein_coding MGP_129S1SvImJ_T0082831.1 MGP_129S1SvImJ_G0031995.1 mouse_genomes_project 7 28932633 28973490 + MGP_129S1SvImJ_P0082831 Zfp568 protein_coding protein_coding MGP_129S1SvImJ_T0082832.1 MGP_129S1SvImJ_G0031995.1 mouse_genomes_project 7 28932633 28973490 + MGP_129S1SvImJ_P0082832 Zfp568 protein_coding protein_coding MGP_129S1SvImJ_T0008813.1 MGP_129S1SvImJ_G0007119.1 mouse_genomes_project 7 14340930 14342170 - Gm29442 lincRNA lincRNA MGP_129S1SvImJ_T0082396.1 MGP_129S1SvImJ_G0031881.1 mouse_genomes_project 7 24426916 24460169 + MGP_129S1SvImJ_P0082396 Cyp2b10 protein_coding protein_coding MGP_129S1SvImJ_T0082397.1 MGP_129S1SvImJ_G0031881.1 mouse_genomes_project 7 24426972 24460104 + MGP_129S1SvImJ_P0082397 Cyp2b10 protein_coding protein_coding MGP_129S1SvImJ_T0082398.1 MGP_129S1SvImJ_G0031881.1 mouse_genomes_project 7 24449381 24450046 + Cyp2b10 protein_coding retained_intron MGP_129S1SvImJ_T0010901.1 MGP_129S1SvImJ_G0009017.1 mouse_genomes_project 7 62740956 62741036 - Gm23490 miRNA miRNA MGP_129S1SvImJ_T0085840.1 MGP_129S1SvImJ_G0032850.1 mouse_genomes_project 7 113344779 113347699 - Dennd5a protein_coding retained_intron MGP_129S1SvImJ_T0085841.1 MGP_129S1SvImJ_G0032850.1 mouse_genomes_project 7 113344779 113415881 - MGP_129S1SvImJ_P0085841 Dennd5a protein_coding protein_coding MGP_129S1SvImJ_T0085842.1 MGP_129S1SvImJ_G0032850.1 mouse_genomes_project 7 113344779 113415951 - MGP_129S1SvImJ_P0085842 Dennd5a protein_coding protein_coding MGP_129S1SvImJ_T0085843.1 MGP_129S1SvImJ_G0032850.1 mouse_genomes_project 7 113347379 113348556 - Dennd5a protein_coding retained_intron MGP_129S1SvImJ_T0085844.1 MGP_129S1SvImJ_G0032850.1 mouse_genomes_project 7 113350071 113351464 - Dennd5a protein_coding retained_intron MGP_129S1SvImJ_T0085845.1 MGP_129S1SvImJ_G0032850.1 mouse_genomes_project 7 113358472 113372942 - Dennd5a protein_coding retained_intron MGP_129S1SvImJ_T0085846.1 MGP_129S1SvImJ_G0032850.1 mouse_genomes_project 7 113373542 113378788 - Dennd5a protein_coding processed_transcript MGP_129S1SvImJ_T0085847.1 MGP_129S1SvImJ_G0032850.1 mouse_genomes_project 7 113388876 113415804 - Dennd5a protein_coding processed_transcript MGP_129S1SvImJ_T0011704.1 MGP_129S1SvImJ_G0009820.1 mouse_genomes_project 7 39992821 39993093 + Gm24910 misc_RNA misc_RNA MGP_129S1SvImJ_T0008956.1 MGP_129S1SvImJ_G0007228.1 mouse_genomes_project 7 83589157 83595194 + 2900076A07Rik lincRNA lincRNA MGP_129S1SvImJ_T0008957.1 MGP_129S1SvImJ_G0007228.1 mouse_genomes_project 7 83589170 83595786 + 2900076A07Rik lincRNA lincRNA MGP_129S1SvImJ_T0008958.1 MGP_129S1SvImJ_G0007228.1 mouse_genomes_project 7 83589178 83595078 + 2900076A07Rik lincRNA lincRNA MGP_129S1SvImJ_T0008959.1 MGP_129S1SvImJ_G0007228.1 mouse_genomes_project 7 83589178 83597128 + 2900076A07Rik lincRNA lincRNA MGP_129S1SvImJ_T0008960.1 MGP_129S1SvImJ_G0007228.1 mouse_genomes_project 7 83589213 83594880 + 2900076A07Rik lincRNA lincRNA MGP_129S1SvImJ_T0008961.1 MGP_129S1SvImJ_G0007228.1 mouse_genomes_project 7 83594038 83595151 + 2900076A07Rik lincRNA lincRNA MGP_129S1SvImJ_T0008962.1 MGP_129S1SvImJ_G0007228.1 mouse_genomes_project 7 83594415 83595230 + 2900076A07Rik lincRNA lincRNA MGP_129S1SvImJ_T0008963.1 MGP_129S1SvImJ_G0007228.1 mouse_genomes_project 7 83594430 83597132 + 2900076A07Rik lincRNA lincRNA MGP_129S1SvImJ_T0082095.1 MGP_129S1SvImJ_G0031806.1 mouse_genomes_project 7 21427826 21496614 + MGP_129S1SvImJ_P0082095 protein_coding protein_coding MGP_129S1SvImJ_T0082096.1 MGP_129S1SvImJ_G0031806.1 mouse_genomes_project 7 21490924 21496962 + protein_coding processed_transcript MGP_129S1SvImJ_T0084916.1 MGP_129S1SvImJ_G0032496.1 mouse_genomes_project 7 91923191 91932991 - MGP_129S1SvImJ_P0084916 Prss23 protein_coding protein_coding MGP_129S1SvImJ_T0015891.1 MGP_129S1SvImJ_G0013980.1 mouse_genomes_project 7 106235488 106236151 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084030.1 MGP_129S1SvImJ_G0032283.1 mouse_genomes_project 7 47654889 47671405 - MGP_129S1SvImJ_P0084030 Mrgpra9 protein_coding protein_coding MGP_129S1SvImJ_T0015798.1 MGP_129S1SvImJ_G0013887.1 mouse_genomes_project 7 42903317 42903801 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100042.1 MGP_129S1SvImJ_G0038109.1 mouse_genomes_project 7 13899599 13899722 - Gm26473 snRNA snRNA MGP_129S1SvImJ_T0085507.1 MGP_129S1SvImJ_G0032676.1 mouse_genomes_project 7 106933097 106934048 + MGP_129S1SvImJ_P0085507 protein_coding protein_coding MGP_129S1SvImJ_T0085092.1 MGP_129S1SvImJ_G0032538.1 mouse_genomes_project 7 101073465 101084078 - MGP_129S1SvImJ_P0085092 Tsku protein_coding protein_coding MGP_129S1SvImJ_T0085093.1 MGP_129S1SvImJ_G0032538.1 mouse_genomes_project 7 101073465 101084118 - MGP_129S1SvImJ_P0085093 Tsku protein_coding protein_coding MGP_129S1SvImJ_T0085094.1 MGP_129S1SvImJ_G0032538.1 mouse_genomes_project 7 101073465 101084078 - MGP_129S1SvImJ_P0085094 Tsku protein_coding protein_coding MGP_129S1SvImJ_T0085095.1 MGP_129S1SvImJ_G0032538.1 mouse_genomes_project 7 101073465 101084082 - MGP_129S1SvImJ_P0085095 Tsku protein_coding protein_coding MGP_129S1SvImJ_T0085096.1 MGP_129S1SvImJ_G0032538.1 mouse_genomes_project 7 101073583 101082869 - MGP_129S1SvImJ_P0085096 Tsku protein_coding protein_coding MGP_129S1SvImJ_T0085097.1 MGP_129S1SvImJ_G0032538.1 mouse_genomes_project 7 101073583 101082869 - MGP_129S1SvImJ_P0085097 Tsku protein_coding protein_coding MGP_129S1SvImJ_T0085098.1 MGP_129S1SvImJ_G0032538.1 mouse_genomes_project 7 101073665 101084078 - MGP_129S1SvImJ_P0085098 Tsku protein_coding protein_coding MGP_129S1SvImJ_T0085099.1 MGP_129S1SvImJ_G0032538.1 mouse_genomes_project 7 101076331 101082977 - Tsku protein_coding processed_transcript MGP_129S1SvImJ_T0015937.1 MGP_129S1SvImJ_G0014026.1 mouse_genomes_project 7 140829679 140830665 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081695.1 MGP_129S1SvImJ_G0031684.1 mouse_genomes_project 7 12001917 12029086 - MGP_129S1SvImJ_P0081695 Sult2a7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0081696.1 MGP_129S1SvImJ_G0031684.1 mouse_genomes_project 7 12002034 12030086 - MGP_129S1SvImJ_P0081696 Sult2a7 protein_coding protein_coding MGP_129S1SvImJ_T0086087.1 MGP_129S1SvImJ_G0032897.1 mouse_genomes_project 7 122208463 122277759 - MGP_129S1SvImJ_P0086087 Syt17 protein_coding protein_coding MGP_129S1SvImJ_T0086088.1 MGP_129S1SvImJ_G0032897.1 mouse_genomes_project 7 122208466 122272533 - MGP_129S1SvImJ_P0086088 Syt17 protein_coding protein_coding MGP_129S1SvImJ_T0086089.1 MGP_129S1SvImJ_G0032897.1 mouse_genomes_project 7 122208467 122271526 - Syt17 protein_coding retained_intron MGP_129S1SvImJ_T0086090.1 MGP_129S1SvImJ_G0032897.1 mouse_genomes_project 7 122236803 122278089 - MGP_129S1SvImJ_P0086090 Syt17 protein_coding protein_coding MGP_129S1SvImJ_T0015811.1 MGP_129S1SvImJ_G0013900.1 mouse_genomes_project 7 47221062 47221948 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081721.1 MGP_129S1SvImJ_G0031695.1 mouse_genomes_project 7 13591480 13612081 - MGP_129S1SvImJ_P0081721 Ehd2 protein_coding protein_coding MGP_129S1SvImJ_T0081722.1 MGP_129S1SvImJ_G0031695.1 mouse_genomes_project 7 13602186 13611989 - MGP_129S1SvImJ_P0081722 Ehd2 protein_coding protein_coding MGP_129S1SvImJ_T0085443.1 MGP_129S1SvImJ_G0032616.1 mouse_genomes_project 7 105653296 105654375 - MGP_129S1SvImJ_P0085443 Olfr551 protein_coding protein_coding MGP_129S1SvImJ_T0018399.1 MGP_129S1SvImJ_G0015669.1 mouse_genomes_project 7 56768512 56786863 + A230056P14Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018400.1 MGP_129S1SvImJ_G0015669.1 mouse_genomes_project 7 56768512 56779048 + A230056P14Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0102711.1 MGP_129S1SvImJ_G0040544.1 mouse_genomes_project 7 14759297 14759658 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0082922.1 MGP_129S1SvImJ_G0032018.1 mouse_genomes_project 7 29403655 29407876 - MGP_129S1SvImJ_P0082922 Hcst protein_coding protein_coding MGP_129S1SvImJ_T0083505.1 MGP_129S1SvImJ_G0032145.1 mouse_genomes_project 7 43874311 43883973 + MGP_129S1SvImJ_P0083505 Klk6 protein_coding protein_coding MGP_129S1SvImJ_T0083506.1 MGP_129S1SvImJ_G0032145.1 mouse_genomes_project 7 43874370 43883729 + MGP_129S1SvImJ_P0083506 Klk6 protein_coding protein_coding MGP_129S1SvImJ_T0083507.1 MGP_129S1SvImJ_G0032145.1 mouse_genomes_project 7 43874382 43880537 + MGP_129S1SvImJ_P0083507 Klk6 protein_coding protein_coding MGP_129S1SvImJ_T0083508.1 MGP_129S1SvImJ_G0032145.1 mouse_genomes_project 7 43877347 43883729 + MGP_129S1SvImJ_P0083508 Klk6 protein_coding protein_coding MGP_129S1SvImJ_T0002268.1 MGP_129S1SvImJ_G0002180.1 mouse_genomes_project 7 65420843 65424246 - TEC TEC MGP_129S1SvImJ_T0102676.1 MGP_129S1SvImJ_G0040509.1 mouse_genomes_project 7 9137988 9138166 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0084590.1 MGP_129S1SvImJ_G0032404.1 mouse_genomes_project 7 82190165 82195561 - MGP_129S1SvImJ_P0084590 Cib1 protein_coding protein_coding MGP_129S1SvImJ_T0084591.1 MGP_129S1SvImJ_G0032404.1 mouse_genomes_project 7 82190173 82195625 - MGP_129S1SvImJ_P0084591 Cib1 protein_coding protein_coding MGP_129S1SvImJ_T0084592.1 MGP_129S1SvImJ_G0032404.1 mouse_genomes_project 7 82190173 82195566 - MGP_129S1SvImJ_P0084592 Cib1 protein_coding protein_coding MGP_129S1SvImJ_T0084593.1 MGP_129S1SvImJ_G0032404.1 mouse_genomes_project 7 82190846 82193355 - Cib1 protein_coding retained_intron MGP_129S1SvImJ_T0084594.1 MGP_129S1SvImJ_G0032404.1 mouse_genomes_project 7 82191167 82195598 - Cib1 protein_coding retained_intron MGP_129S1SvImJ_T0084595.1 MGP_129S1SvImJ_G0032404.1 mouse_genomes_project 7 82191407 82195806 - MGP_129S1SvImJ_P0084595 Cib1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084596.1 MGP_129S1SvImJ_G0032404.1 mouse_genomes_project 7 82194446 82195732 - Cib1 protein_coding retained_intron MGP_129S1SvImJ_T0084597.1 MGP_129S1SvImJ_G0032404.1 mouse_genomes_project 7 82194566 82195582 - Cib1 protein_coding retained_intron MGP_129S1SvImJ_T0081187.1 MGP_129S1SvImJ_G0031520.1 mouse_genomes_project 7 406374 421040 - MGP_129S1SvImJ_P0081187 Tarm1 protein_coding protein_coding MGP_129S1SvImJ_T0081188.1 MGP_129S1SvImJ_G0031520.1 mouse_genomes_project 7 408396 421106 - MGP_129S1SvImJ_P0081188 Tarm1 protein_coding protein_coding MGP_129S1SvImJ_T0081189.1 MGP_129S1SvImJ_G0031520.1 mouse_genomes_project 7 409590 421000 - MGP_129S1SvImJ_P0081189 Tarm1 protein_coding protein_coding MGP_129S1SvImJ_T0081972.1 MGP_129S1SvImJ_G0031771.1 mouse_genomes_project 7 17342170 17353256 + MGP_129S1SvImJ_P0081972 Ercc1 protein_coding protein_coding MGP_129S1SvImJ_T0081973.1 MGP_129S1SvImJ_G0031771.1 mouse_genomes_project 7 17342473 17352491 + Ercc1 protein_coding retained_intron MGP_129S1SvImJ_T0081974.1 MGP_129S1SvImJ_G0031771.1 mouse_genomes_project 7 17342479 17347968 + Ercc1 protein_coding retained_intron MGP_129S1SvImJ_T0081975.1 MGP_129S1SvImJ_G0031771.1 mouse_genomes_project 7 17342521 17351861 + MGP_129S1SvImJ_P0081975 Ercc1 protein_coding protein_coding MGP_129S1SvImJ_T0081976.1 MGP_129S1SvImJ_G0031771.1 mouse_genomes_project 7 17342532 17347615 + MGP_129S1SvImJ_P0081976 Ercc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081977.1 MGP_129S1SvImJ_G0031771.1 mouse_genomes_project 7 17345893 17349870 + MGP_129S1SvImJ_P0081977 Ercc1 protein_coding protein_coding MGP_129S1SvImJ_T0081978.1 MGP_129S1SvImJ_G0031771.1 mouse_genomes_project 7 17346904 17351347 + Ercc1 protein_coding processed_transcript MGP_129S1SvImJ_T0081979.1 MGP_129S1SvImJ_G0031771.1 mouse_genomes_project 7 17349332 17352198 + Ercc1 protein_coding retained_intron MGP_129S1SvImJ_T0081980.1 MGP_129S1SvImJ_G0031771.1 mouse_genomes_project 7 17349797 17353254 + MGP_129S1SvImJ_P0081980 Ercc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081981.1 MGP_129S1SvImJ_G0031771.1 mouse_genomes_project 7 17351367 17353255 + Ercc1 protein_coding retained_intron MGP_129S1SvImJ_T0081969.1 MGP_129S1SvImJ_G0031769.1 mouse_genomes_project 7 17271627 17290797 + MGP_129S1SvImJ_P0081969 Rtn2 protein_coding protein_coding MGP_129S1SvImJ_T0081970.1 MGP_129S1SvImJ_G0031769.1 mouse_genomes_project 7 17281731 17290792 + MGP_129S1SvImJ_P0081970 Rtn2 protein_coding protein_coding MGP_129S1SvImJ_T0086111.1 MGP_129S1SvImJ_G0032904.1 mouse_genomes_project 7 122609065 122723510 + MGP_129S1SvImJ_P0086111 9030624J02Rik protein_coding protein_coding MGP_129S1SvImJ_T0086112.1 MGP_129S1SvImJ_G0032904.1 mouse_genomes_project 7 122609525 122656693 + 9030624J02Rik protein_coding processed_transcript MGP_129S1SvImJ_T0086113.1 MGP_129S1SvImJ_G0032904.1 mouse_genomes_project 7 122609540 122722024 + MGP_129S1SvImJ_P0086113 9030624J02Rik protein_coding protein_coding MGP_129S1SvImJ_T0086114.1 MGP_129S1SvImJ_G0032904.1 mouse_genomes_project 7 122609540 122722034 + MGP_129S1SvImJ_P0086114 9030624J02Rik protein_coding protein_coding MGP_129S1SvImJ_T0086115.1 MGP_129S1SvImJ_G0032904.1 mouse_genomes_project 7 122609540 122634522 + MGP_129S1SvImJ_P0086115 9030624J02Rik protein_coding protein_coding MGP_129S1SvImJ_T0086116.1 MGP_129S1SvImJ_G0032904.1 mouse_genomes_project 7 122609542 122618486 + 9030624J02Rik protein_coding retained_intron MGP_129S1SvImJ_T0086117.1 MGP_129S1SvImJ_G0032904.1 mouse_genomes_project 7 122618717 122638807 + 9030624J02Rik protein_coding retained_intron MGP_129S1SvImJ_T0086118.1 MGP_129S1SvImJ_G0032904.1 mouse_genomes_project 7 122622951 122624508 + 9030624J02Rik protein_coding retained_intron MGP_129S1SvImJ_T0086119.1 MGP_129S1SvImJ_G0032904.1 mouse_genomes_project 7 122636485 122722032 + MGP_129S1SvImJ_P0086119 9030624J02Rik protein_coding protein_coding MGP_129S1SvImJ_T0086120.1 MGP_129S1SvImJ_G0032904.1 mouse_genomes_project 7 122667511 122705797 + MGP_129S1SvImJ_P0086120 9030624J02Rik protein_coding protein_coding MGP_129S1SvImJ_T0086121.1 MGP_129S1SvImJ_G0032904.1 mouse_genomes_project 7 122682575 122714547 + 9030624J02Rik protein_coding retained_intron MGP_129S1SvImJ_T0086122.1 MGP_129S1SvImJ_G0032904.1 mouse_genomes_project 7 122685195 122691648 + 9030624J02Rik protein_coding retained_intron MGP_129S1SvImJ_T0086123.1 MGP_129S1SvImJ_G0032904.1 mouse_genomes_project 7 122701240 122706021 + 9030624J02Rik protein_coding retained_intron MGP_129S1SvImJ_T0086124.1 MGP_129S1SvImJ_G0032904.1 mouse_genomes_project 7 122704173 122721844 + 9030624J02Rik protein_coding processed_transcript MGP_129S1SvImJ_T0085827.1 MGP_129S1SvImJ_G0032845.1 mouse_genomes_project 7 113155385 113166922 - MGP_129S1SvImJ_P0085827 BC051019 protein_coding protein_coding MGP_129S1SvImJ_T0085828.1 MGP_129S1SvImJ_G0032845.1 mouse_genomes_project 7 113155388 113166986 - MGP_129S1SvImJ_P0085828 BC051019 protein_coding protein_coding MGP_129S1SvImJ_T0085829.1 MGP_129S1SvImJ_G0032845.1 mouse_genomes_project 7 113159112 113164223 - MGP_129S1SvImJ_P0085829 BC051019 protein_coding protein_coding MGP_129S1SvImJ_T0082303.1 MGP_129S1SvImJ_G0031860.1 mouse_genomes_project 7 23749936 23752861 - MGP_129S1SvImJ_P0082303 Pafah1b3 protein_coding protein_coding MGP_129S1SvImJ_T0082304.1 MGP_129S1SvImJ_G0031860.1 mouse_genomes_project 7 23749944 23751598 - Pafah1b3 protein_coding retained_intron MGP_129S1SvImJ_T0082305.1 MGP_129S1SvImJ_G0031860.1 mouse_genomes_project 7 23750254 23752778 - MGP_129S1SvImJ_P0082305 Pafah1b3 protein_coding protein_coding MGP_129S1SvImJ_T0082306.1 MGP_129S1SvImJ_G0031860.1 mouse_genomes_project 7 23750861 23752833 - MGP_129S1SvImJ_P0082306 Pafah1b3 protein_coding protein_coding MGP_129S1SvImJ_T0082307.1 MGP_129S1SvImJ_G0031860.1 mouse_genomes_project 7 23751515 23752817 - Pafah1b3 protein_coding retained_intron MGP_129S1SvImJ_T0082308.1 MGP_129S1SvImJ_G0031860.1 mouse_genomes_project 7 23751769 23752830 - Pafah1b3 protein_coding processed_transcript MGP_129S1SvImJ_T0081376.1 MGP_129S1SvImJ_G0031552.1 mouse_genomes_project 7 1547918 1550361 - MGP_129S1SvImJ_P0081376 Tmem86b protein_coding protein_coding MGP_129S1SvImJ_T0081377.1 MGP_129S1SvImJ_G0031552.1 mouse_genomes_project 7 1547920 1550066 - MGP_129S1SvImJ_P0081377 Tmem86b protein_coding protein_coding MGP_129S1SvImJ_T0081378.1 MGP_129S1SvImJ_G0031552.1 mouse_genomes_project 7 1548284 1551301 - MGP_129S1SvImJ_P0081378 Tmem86b protein_coding protein_coding MGP_129S1SvImJ_T0081379.1 MGP_129S1SvImJ_G0031552.1 mouse_genomes_project 7 1548482 1550215 - MGP_129S1SvImJ_P0081379 Tmem86b protein_coding protein_coding MGP_129S1SvImJ_T0102802.1 MGP_129S1SvImJ_G0040634.1 mouse_genomes_project 7 106231026 106231968 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015802.1 MGP_129S1SvImJ_G0013891.1 mouse_genomes_project 7 43352428 43352666 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085572.1 MGP_129S1SvImJ_G0032716.1 mouse_genomes_project 7 107572978 107596698 - MGP_129S1SvImJ_P0085572 Trim30a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0085573.1 MGP_129S1SvImJ_G0032716.1 mouse_genomes_project 7 107575290 107576567 - Trim30a protein_coding retained_intron MGP_129S1SvImJ_T0085574.1 MGP_129S1SvImJ_G0032716.1 mouse_genomes_project 7 107575315 107576261 - Trim30a protein_coding processed_transcript MGP_129S1SvImJ_T0085575.1 MGP_129S1SvImJ_G0032716.1 mouse_genomes_project 7 107575630 107576213 - Trim30a protein_coding retained_intron MGP_129S1SvImJ_T0002296.1 MGP_129S1SvImJ_G0002207.1 mouse_genomes_project 7 81176150 81180036 + TEC TEC MGP_129S1SvImJ_T0102674.1 MGP_129S1SvImJ_G0040507.1 mouse_genomes_project 7 7930343 7931205 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0087360.1 MGP_129S1SvImJ_G0033162.1 mouse_genomes_project 7 145175086 145185090 + MGP_129S1SvImJ_P0087360 Prap1 protein_coding protein_coding MGP_129S1SvImJ_T0083322.1 MGP_129S1SvImJ_G0032094.1 mouse_genomes_project 7 35038116 35045419 - MGP_129S1SvImJ_P0083322 Pdcd5 protein_coding protein_coding MGP_129S1SvImJ_T0083323.1 MGP_129S1SvImJ_G0032094.1 mouse_genomes_project 7 35038146 35045107 - MGP_129S1SvImJ_P0083323 Pdcd5 protein_coding protein_coding MGP_129S1SvImJ_T0083324.1 MGP_129S1SvImJ_G0032094.1 mouse_genomes_project 7 35038148 35040953 - Pdcd5 protein_coding retained_intron MGP_129S1SvImJ_T0083325.1 MGP_129S1SvImJ_G0032094.1 mouse_genomes_project 7 35038150 35041764 - Pdcd5 protein_coding retained_intron MGP_129S1SvImJ_T0083326.1 MGP_129S1SvImJ_G0032094.1 mouse_genomes_project 7 35041730 35045402 - Pdcd5 protein_coding retained_intron MGP_129S1SvImJ_T0083327.1 MGP_129S1SvImJ_G0032094.1 mouse_genomes_project 7 35042096 35045378 - Pdcd5 protein_coding retained_intron MGP_129S1SvImJ_T0083328.1 MGP_129S1SvImJ_G0032094.1 mouse_genomes_project 7 35043576 35045364 - Pdcd5 protein_coding retained_intron MGP_129S1SvImJ_T0005286.1 MGP_129S1SvImJ_G0004489.1 mouse_genomes_project 7 107504139 107513466 + Gm15133 antisense antisense MGP_129S1SvImJ_T0005287.1 MGP_129S1SvImJ_G0004489.1 mouse_genomes_project 7 107504140 107513637 + Gm15133 antisense antisense MGP_129S1SvImJ_T0005321.1 MGP_129S1SvImJ_G0004515.1 mouse_genomes_project 7 133180569 133181667 - Gm44672 antisense antisense MGP_129S1SvImJ_T0102778.1 MGP_129S1SvImJ_G0040610.1 mouse_genomes_project 7 87639687 87644740 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0010851.1 MGP_129S1SvImJ_G0008967.1 mouse_genomes_project 7 1358224 1358320 - Gm24605 miRNA miRNA MGP_129S1SvImJ_T0087848.1 MGP_129S1SvImJ_G0033278.1 mouse_genomes_project 7 148945284 149011745 - MGP_129S1SvImJ_P0087848 Tnfrsf23 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087852.1 MGP_129S1SvImJ_G0033278.1 mouse_genomes_project 7 148995750 149011745 - MGP_129S1SvImJ_P0087852 Tnfrsf23 protein_coding protein_coding MGP_129S1SvImJ_T0002259.1 MGP_129S1SvImJ_G0002171.1 mouse_genomes_project 7 56779485 56780812 - TEC TEC MGP_129S1SvImJ_T0087614.1 MGP_129S1SvImJ_G0033231.1 mouse_genomes_project 7 146638114 146642711 + MGP_129S1SvImJ_P0087614 Rplp2 protein_coding protein_coding MGP_129S1SvImJ_T0087615.1 MGP_129S1SvImJ_G0033231.1 mouse_genomes_project 7 146638375 146639361 + Rplp2 protein_coding retained_intron MGP_129S1SvImJ_T0087616.1 MGP_129S1SvImJ_G0033231.1 mouse_genomes_project 7 146638413 146639772 + Rplp2 protein_coding retained_intron MGP_129S1SvImJ_T0087617.1 MGP_129S1SvImJ_G0033231.1 mouse_genomes_project 7 146638456 146642476 + MGP_129S1SvImJ_P0087617 Rplp2 protein_coding protein_coding MGP_129S1SvImJ_T0087618.1 MGP_129S1SvImJ_G0033231.1 mouse_genomes_project 7 146638594 146642476 + MGP_129S1SvImJ_P0087618 Rplp2 protein_coding protein_coding MGP_129S1SvImJ_T0087619.1 MGP_129S1SvImJ_G0033231.1 mouse_genomes_project 7 146641947 146642475 + Rplp2 protein_coding processed_transcript MGP_129S1SvImJ_T0085138.1 MGP_129S1SvImJ_G0032548.1 mouse_genomes_project 7 102135613 102145205 - MGP_129S1SvImJ_P0085138 Serpinh1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0082597.1 MGP_129S1SvImJ_G0031938.1 mouse_genomes_project 7 27087461 27094015 - MGP_129S1SvImJ_P0082597 Timm50 protein_coding protein_coding MGP_129S1SvImJ_T0082598.1 MGP_129S1SvImJ_G0031938.1 mouse_genomes_project 7 27087767 27088608 - Timm50 protein_coding retained_intron MGP_129S1SvImJ_T0082599.1 MGP_129S1SvImJ_G0031938.1 mouse_genomes_project 7 27088371 27089962 - Timm50 protein_coding retained_intron MGP_129S1SvImJ_T0082600.1 MGP_129S1SvImJ_G0031938.1 mouse_genomes_project 7 27091448 27093980 - Timm50 protein_coding retained_intron MGP_129S1SvImJ_T0082601.1 MGP_129S1SvImJ_G0031938.1 mouse_genomes_project 7 27092159 27093999 - Timm50 protein_coding retained_intron MGP_129S1SvImJ_T0082602.1 MGP_129S1SvImJ_G0031938.1 mouse_genomes_project 7 27092856 27093882 - Timm50 protein_coding processed_transcript MGP_129S1SvImJ_T0083273.1 MGP_129S1SvImJ_G0032085.1 mouse_genomes_project 7 34652825 34701062 - MGP_129S1SvImJ_P0083273 Gpatch1 protein_coding protein_coding MGP_129S1SvImJ_T0083274.1 MGP_129S1SvImJ_G0032085.1 mouse_genomes_project 7 34652833 34701043 - MGP_129S1SvImJ_P0083274 Gpatch1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083275.1 MGP_129S1SvImJ_G0032085.1 mouse_genomes_project 7 34662350 34701062 - MGP_129S1SvImJ_P0083275 Gpatch1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083276.1 MGP_129S1SvImJ_G0032085.1 mouse_genomes_project 7 34662383 34664051 - Gpatch1 protein_coding retained_intron MGP_129S1SvImJ_T0083277.1 MGP_129S1SvImJ_G0032085.1 mouse_genomes_project 7 34688167 34701017 - Gpatch1 protein_coding retained_intron MGP_129S1SvImJ_T0098636.1 MGP_129S1SvImJ_G0036721.1 mouse_genomes_project 7 72209669 72209754 + Gm24880 rRNA rRNA MGP_129S1SvImJ_T0102734.1 MGP_129S1SvImJ_G0040566.1 mouse_genomes_project 7 40624321 40628941 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102718.1 MGP_129S1SvImJ_G0040550.1 mouse_genomes_project 7 24715698 24722565 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0082620.1 MGP_129S1SvImJ_G0031944.1 mouse_genomes_project 7 27176829 27184532 + MGP_129S1SvImJ_P0082620 Paf1 protein_coding protein_coding MGP_129S1SvImJ_T0082621.1 MGP_129S1SvImJ_G0031944.1 mouse_genomes_project 7 27176840 27177938 + Paf1 protein_coding retained_intron MGP_129S1SvImJ_T0082622.1 MGP_129S1SvImJ_G0031944.1 mouse_genomes_project 7 27176919 27184527 + Paf1 protein_coding retained_intron MGP_129S1SvImJ_T0082623.1 MGP_129S1SvImJ_G0031944.1 mouse_genomes_project 7 27177039 27180942 + Paf1 protein_coding retained_intron MGP_129S1SvImJ_T0082624.1 MGP_129S1SvImJ_G0031944.1 mouse_genomes_project 7 27177336 27180860 + Paf1 protein_coding retained_intron MGP_129S1SvImJ_T0082625.1 MGP_129S1SvImJ_G0031944.1 mouse_genomes_project 7 27179927 27180964 + Paf1 protein_coding retained_intron MGP_129S1SvImJ_T0082626.1 MGP_129S1SvImJ_G0031944.1 mouse_genomes_project 7 27180589 27181244 + Paf1 protein_coding retained_intron MGP_129S1SvImJ_T0082627.1 MGP_129S1SvImJ_G0031944.1 mouse_genomes_project 7 27180989 27183887 + Paf1 protein_coding retained_intron MGP_129S1SvImJ_T0082628.1 MGP_129S1SvImJ_G0031944.1 mouse_genomes_project 7 27183577 27184204 + Paf1 protein_coding processed_transcript MGP_129S1SvImJ_T0087863.1 MGP_129S1SvImJ_G0033283.1 mouse_genomes_project 7 149124097 149152857 - MGP_129S1SvImJ_P0087863 Nadsyn1 protein_coding protein_coding MGP_129S1SvImJ_T0087864.1 MGP_129S1SvImJ_G0033283.1 mouse_genomes_project 7 149124363 149152803 - MGP_129S1SvImJ_P0087864 Nadsyn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087865.1 MGP_129S1SvImJ_G0033283.1 mouse_genomes_project 7 149124382 149152858 - MGP_129S1SvImJ_P0087865 Nadsyn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087866.1 MGP_129S1SvImJ_G0033283.1 mouse_genomes_project 7 149126362 149127355 - Nadsyn1 protein_coding retained_intron MGP_129S1SvImJ_T0087867.1 MGP_129S1SvImJ_G0033283.1 mouse_genomes_project 7 149142776 149152834 - MGP_129S1SvImJ_P0087867 Nadsyn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087868.1 MGP_129S1SvImJ_G0033283.1 mouse_genomes_project 7 149143299 149152764 - Nadsyn1 protein_coding retained_intron MGP_129S1SvImJ_T0087869.1 MGP_129S1SvImJ_G0033283.1 mouse_genomes_project 7 149143437 149152821 - MGP_129S1SvImJ_P0087869 Nadsyn1 protein_coding protein_coding MGP_129S1SvImJ_T0087870.1 MGP_129S1SvImJ_G0033283.1 mouse_genomes_project 7 149145351 149152865 - Nadsyn1 protein_coding retained_intron MGP_129S1SvImJ_T0083861.1 MGP_129S1SvImJ_G0032235.1 mouse_genomes_project 7 45927225 45941054 + MGP_129S1SvImJ_P0083861 Rasip1 protein_coding protein_coding MGP_129S1SvImJ_T0015880.1 MGP_129S1SvImJ_G0013969.1 mouse_genomes_project 7 100644182 100644573 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015698.1 MGP_129S1SvImJ_G0013787.1 mouse_genomes_project 7 927766 928046 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0083692.1 MGP_129S1SvImJ_G0032184.1 mouse_genomes_project 7 45087405 45101637 - MGP_129S1SvImJ_P0083692 Med25 protein_coding protein_coding MGP_129S1SvImJ_T0018424.1 MGP_129S1SvImJ_G0015676.1 mouse_genomes_project 7 75537127 75546678 + Gm38143 processed_transcript processed_transcript MGP_129S1SvImJ_T0086189.1 MGP_129S1SvImJ_G0032923.1 mouse_genomes_project 7 124045027 124074233 + MGP_129S1SvImJ_P0086189 Tmem159 protein_coding protein_coding MGP_129S1SvImJ_T0086190.1 MGP_129S1SvImJ_G0032923.1 mouse_genomes_project 7 124045046 124047891 + Tmem159 protein_coding retained_intron MGP_129S1SvImJ_T0086191.1 MGP_129S1SvImJ_G0032923.1 mouse_genomes_project 7 124045559 124074239 + MGP_129S1SvImJ_P0086191 Tmem159 protein_coding protein_coding MGP_129S1SvImJ_T0082227.1 MGP_129S1SvImJ_G0031847.1 mouse_genomes_project 7 23307458 23312275 + MGP_129S1SvImJ_P0082227 Cd79a protein_coding protein_coding MGP_129S1SvImJ_T0098638.1 MGP_129S1SvImJ_G0036723.1 mouse_genomes_project 7 92711908 92712021 + n-R5s155 rRNA rRNA MGP_129S1SvImJ_T0087667.1 MGP_129S1SvImJ_G0033242.1 mouse_genomes_project 7 147066706 147094300 - MGP_129S1SvImJ_P0087667 Tollip protein_coding protein_coding MGP_129S1SvImJ_T0087668.1 MGP_129S1SvImJ_G0033242.1 mouse_genomes_project 7 147076251 147094193 - MGP_129S1SvImJ_P0087668 Tollip protein_coding protein_coding MGP_129S1SvImJ_T0087669.1 MGP_129S1SvImJ_G0033242.1 mouse_genomes_project 7 147083877 147094308 - MGP_129S1SvImJ_P0087669 Tollip protein_coding protein_coding MGP_129S1SvImJ_T0005224.1 MGP_129S1SvImJ_G0004448.1 mouse_genomes_project 7 37741085 37741301 - D530033B14Rik antisense antisense MGP_129S1SvImJ_T0005225.1 MGP_129S1SvImJ_G0004448.1 mouse_genomes_project 7 37741281 37754776 - D530033B14Rik antisense antisense MGP_129S1SvImJ_T0082097.1 MGP_129S1SvImJ_G0031807.1 mouse_genomes_project 7 21681859 21682774 - MGP_129S1SvImJ_P0082097 protein_coding protein_coding MGP_129S1SvImJ_T0010840.1 MGP_129S1SvImJ_G0008956.1 mouse_genomes_project 7 95016 95099 + Mir290a miRNA miRNA MGP_129S1SvImJ_T0005244.1 MGP_129S1SvImJ_G0004461.1 mouse_genomes_project 7 74856668 74927884 - A730056A06Rik antisense antisense MGP_129S1SvImJ_T0005245.1 MGP_129S1SvImJ_G0004461.1 mouse_genomes_project 7 74858908 74927893 - A730056A06Rik antisense antisense MGP_129S1SvImJ_T0084805.1 MGP_129S1SvImJ_G0032444.1 mouse_genomes_project 7 84763543 84780147 - MGP_129S1SvImJ_P0084805 Saxo2 protein_coding protein_coding MGP_129S1SvImJ_T0084806.1 MGP_129S1SvImJ_G0032444.1 mouse_genomes_project 7 84765047 84780053 - MGP_129S1SvImJ_P0084806 Saxo2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0084807.1 MGP_129S1SvImJ_G0032444.1 mouse_genomes_project 7 84765871 84780147 - Saxo2 protein_coding processed_transcript MGP_129S1SvImJ_T0084808.1 MGP_129S1SvImJ_G0032444.1 mouse_genomes_project 7 84773765 84780152 - Saxo2 protein_coding retained_intron MGP_129S1SvImJ_T0084809.1 MGP_129S1SvImJ_G0032444.1 mouse_genomes_project 7 84777795 84780152 - Saxo2 protein_coding processed_transcript MGP_129S1SvImJ_T0015944.1 MGP_129S1SvImJ_G0014033.1 mouse_genomes_project 7 148901606 148902162 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082590.1 MGP_129S1SvImJ_G0031935.1 mouse_genomes_project 7 27054054 27056478 + MGP_129S1SvImJ_P0082590 Eid2b protein_coding protein_coding MGP_129S1SvImJ_T0081488.1 MGP_129S1SvImJ_G0031593.1 mouse_genomes_project 7 3085926 3155995 + MGP_129S1SvImJ_P0081488 Nlrp4c protein_coding protein_coding MGP_129S1SvImJ_T0081489.1 MGP_129S1SvImJ_G0031593.1 mouse_genomes_project 7 3086034 3155530 + MGP_129S1SvImJ_P0081489 Nlrp4c protein_coding protein_coding MGP_129S1SvImJ_T0015935.1 MGP_129S1SvImJ_G0014024.1 mouse_genomes_project 7 138498518 138500493 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081524.1 MGP_129S1SvImJ_G0031604.1 mouse_genomes_project 7 3503178 3538791 + MGP_129S1SvImJ_P0081524 Gm20715 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0015929.1 MGP_129S1SvImJ_G0014018.1 mouse_genomes_project 7 132560200 132561104 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0083900.1 MGP_129S1SvImJ_G0032247.1 mouse_genomes_project 7 46103123 46125331 + MGP_129S1SvImJ_P0083900 Lmtk3 protein_coding protein_coding MGP_129S1SvImJ_T0083901.1 MGP_129S1SvImJ_G0032247.1 mouse_genomes_project 7 46103186 46112187 + MGP_129S1SvImJ_P0083901 Lmtk3 protein_coding protein_coding MGP_129S1SvImJ_T0083902.1 MGP_129S1SvImJ_G0032247.1 mouse_genomes_project 7 46103332 46125296 + MGP_129S1SvImJ_P0083902 Lmtk3 protein_coding protein_coding MGP_129S1SvImJ_T0083903.1 MGP_129S1SvImJ_G0032247.1 mouse_genomes_project 7 46106640 46125331 + MGP_129S1SvImJ_P0083903 Lmtk3 protein_coding protein_coding MGP_129S1SvImJ_T0083904.1 MGP_129S1SvImJ_G0032247.1 mouse_genomes_project 7 46106647 46109209 + MGP_129S1SvImJ_P0083904 Lmtk3 protein_coding protein_coding MGP_129S1SvImJ_T0083905.1 MGP_129S1SvImJ_G0032247.1 mouse_genomes_project 7 46106770 46109020 + Lmtk3 protein_coding retained_intron MGP_129S1SvImJ_T0083906.1 MGP_129S1SvImJ_G0032247.1 mouse_genomes_project 7 46107818 46113809 + MGP_129S1SvImJ_P0083906 Lmtk3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083907.1 MGP_129S1SvImJ_G0032247.1 mouse_genomes_project 7 46109164 46113848 + MGP_129S1SvImJ_P0083907 Lmtk3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0002218.1 MGP_129S1SvImJ_G0002130.1 mouse_genomes_project 7 1576147 1577442 + TEC TEC MGP_129S1SvImJ_T0099008.1 MGP_129S1SvImJ_G0037081.1 mouse_genomes_project 7 149829547 149830008 - Gm14376 sense_intronic sense_intronic MGP_129S1SvImJ_T0082101.1 MGP_129S1SvImJ_G0031811.1 mouse_genomes_project 7 22044800 22045715 - MGP_129S1SvImJ_P0082101 protein_coding protein_coding MGP_129S1SvImJ_T0085517.1 MGP_129S1SvImJ_G0032684.1 mouse_genomes_project 7 107050780 107052028 - MGP_129S1SvImJ_P0085517 Hbb-bh2 protein_coding protein_coding MGP_129S1SvImJ_T0086187.1 MGP_129S1SvImJ_G0032922.1 mouse_genomes_project 7 123860831 124037538 - MGP_129S1SvImJ_P0086187 Dnah3 protein_coding protein_coding MGP_129S1SvImJ_T0086188.1 MGP_129S1SvImJ_G0032922.1 mouse_genomes_project 7 123860831 124037538 - MGP_129S1SvImJ_P0086188 Dnah3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0010959.1 MGP_129S1SvImJ_G0009075.1 mouse_genomes_project 7 148874424 148874513 - Mir7064 miRNA miRNA MGP_129S1SvImJ_T0101328.1 MGP_129S1SvImJ_G0039395.1 mouse_genomes_project 7 71358858 71358987 - Gm24120 snoRNA snoRNA MGP_129S1SvImJ_T0010872.1 MGP_129S1SvImJ_G0008988.1 mouse_genomes_project 7 27370146 27370206 - Mir7049 miRNA miRNA MGP_129S1SvImJ_T0085292.1 MGP_129S1SvImJ_G0032584.1 mouse_genomes_project 7 104314456 104383386 + MGP_129S1SvImJ_P0085292 Arap1 protein_coding protein_coding MGP_129S1SvImJ_T0085293.1 MGP_129S1SvImJ_G0032584.1 mouse_genomes_project 7 104332806 104344517 + MGP_129S1SvImJ_P0085293 Arap1 protein_coding protein_coding MGP_129S1SvImJ_T0085294.1 MGP_129S1SvImJ_G0032584.1 mouse_genomes_project 7 104333021 104344391 + MGP_129S1SvImJ_P0085294 Arap1 protein_coding protein_coding MGP_129S1SvImJ_T0085295.1 MGP_129S1SvImJ_G0032584.1 mouse_genomes_project 7 104333547 104344526 + MGP_129S1SvImJ_P0085295 Arap1 protein_coding protein_coding MGP_129S1SvImJ_T0085296.1 MGP_129S1SvImJ_G0032584.1 mouse_genomes_project 7 104344354 104383953 + MGP_129S1SvImJ_P0085296 Arap1 protein_coding protein_coding MGP_129S1SvImJ_T0085297.1 MGP_129S1SvImJ_G0032584.1 mouse_genomes_project 7 104349744 104358101 + MGP_129S1SvImJ_P0085297 Arap1 protein_coding protein_coding MGP_129S1SvImJ_T0085298.1 MGP_129S1SvImJ_G0032584.1 mouse_genomes_project 7 104354400 104357167 + Arap1 protein_coding processed_transcript MGP_129S1SvImJ_T0085299.1 MGP_129S1SvImJ_G0032584.1 mouse_genomes_project 7 104355593 104357771 + MGP_129S1SvImJ_P0085299 Arap1 protein_coding protein_coding MGP_129S1SvImJ_T0085300.1 MGP_129S1SvImJ_G0032584.1 mouse_genomes_project 7 104356970 104358019 + MGP_129S1SvImJ_P0085300 Arap1 protein_coding protein_coding MGP_129S1SvImJ_T0085301.1 MGP_129S1SvImJ_G0032584.1 mouse_genomes_project 7 104356975 104358411 + MGP_129S1SvImJ_P0085301 Arap1 protein_coding protein_coding MGP_129S1SvImJ_T0085302.1 MGP_129S1SvImJ_G0032584.1 mouse_genomes_project 7 104365916 104384652 + MGP_129S1SvImJ_P0085302 Arap1 protein_coding protein_coding MGP_129S1SvImJ_T0085303.1 MGP_129S1SvImJ_G0032584.1 mouse_genomes_project 7 104365936 104384652 + MGP_129S1SvImJ_P0085303 Arap1 protein_coding protein_coding MGP_129S1SvImJ_T0085304.1 MGP_129S1SvImJ_G0032584.1 mouse_genomes_project 7 104366203 104367680 + Arap1 protein_coding retained_intron MGP_129S1SvImJ_T0085305.1 MGP_129S1SvImJ_G0032584.1 mouse_genomes_project 7 104367397 104369907 + Arap1 protein_coding processed_transcript MGP_129S1SvImJ_T0085306.1 MGP_129S1SvImJ_G0032584.1 mouse_genomes_project 7 104369892 104371096 + Arap1 protein_coding processed_transcript MGP_129S1SvImJ_T0085307.1 MGP_129S1SvImJ_G0032584.1 mouse_genomes_project 7 104373571 104381108 + Arap1 protein_coding retained_intron MGP_129S1SvImJ_T0085308.1 MGP_129S1SvImJ_G0032584.1 mouse_genomes_project 7 104379676 104383744 + Arap1 protein_coding retained_intron MGP_129S1SvImJ_T0085171.1 MGP_129S1SvImJ_G0032560.1 mouse_genomes_project 7 102756423 102831698 - MGP_129S1SvImJ_P0085171 Rnf169 protein_coding protein_coding MGP_129S1SvImJ_T0085172.1 MGP_129S1SvImJ_G0032560.1 mouse_genomes_project 7 102773233 102811855 - Rnf169 protein_coding processed_transcript MGP_129S1SvImJ_T0082642.1 MGP_129S1SvImJ_G0031951.1 mouse_genomes_project 7 27345924 27347250 + MGP_129S1SvImJ_P0082642 Sycn protein_coding protein_coding MGP_129S1SvImJ_T0011716.1 MGP_129S1SvImJ_G0009832.1 mouse_genomes_project 7 131361094 131361340 + Gm25333 misc_RNA misc_RNA MGP_129S1SvImJ_T0084985.1 MGP_129S1SvImJ_G0032516.1 mouse_genomes_project 7 95438185 95496206 + MGP_129S1SvImJ_P0084985 Prcp protein_coding protein_coding MGP_129S1SvImJ_T0015814.1 MGP_129S1SvImJ_G0013903.1 mouse_genomes_project 7 48813795 48814432 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100086.1 MGP_129S1SvImJ_G0038153.1 mouse_genomes_project 7 125042179 125042282 - Gm25924 snRNA snRNA MGP_129S1SvImJ_T0087822.1 MGP_129S1SvImJ_G0033271.1 mouse_genomes_project 7 148387221 148431688 + MGP_129S1SvImJ_P0087822 Kcnq1 protein_coding protein_coding MGP_129S1SvImJ_T0087823.1 MGP_129S1SvImJ_G0033271.1 mouse_genomes_project 7 148387374 148431688 + MGP_129S1SvImJ_P0087823 Kcnq1 protein_coding protein_coding MGP_129S1SvImJ_T0087824.1 MGP_129S1SvImJ_G0033271.1 mouse_genomes_project 7 148387604 148431688 + MGP_129S1SvImJ_P0087824 Kcnq1 protein_coding protein_coding MGP_129S1SvImJ_T0087825.1 MGP_129S1SvImJ_G0033271.1 mouse_genomes_project 7 148388113 148717765 + MGP_129S1SvImJ_P0087825 Kcnq1 protein_coding protein_coding MGP_129S1SvImJ_T0087826.1 MGP_129S1SvImJ_G0033271.1 mouse_genomes_project 7 148388410 148716848 + MGP_129S1SvImJ_P0087826 Kcnq1 protein_coding protein_coding MGP_129S1SvImJ_T0087827.1 MGP_129S1SvImJ_G0033271.1 mouse_genomes_project 7 148389210 148431688 + MGP_129S1SvImJ_P0087827 Kcnq1 protein_coding protein_coding MGP_129S1SvImJ_T0087828.1 MGP_129S1SvImJ_G0033271.1 mouse_genomes_project 7 148390053 148431688 + MGP_129S1SvImJ_P0087828 Kcnq1 protein_coding protein_coding MGP_129S1SvImJ_T0081574.1 MGP_129S1SvImJ_G0031641.1 mouse_genomes_project 7 9645518 9646439 - MGP_129S1SvImJ_P0081574 Vmn1r81 protein_coding protein_coding MGP_129S1SvImJ_T0082955.1 MGP_129S1SvImJ_G0032027.1 mouse_genomes_project 7 29560475 29564681 - MGP_129S1SvImJ_P0082955 Lin37 protein_coding protein_coding MGP_129S1SvImJ_T0082956.1 MGP_129S1SvImJ_G0032027.1 mouse_genomes_project 7 29560478 29561056 - Lin37 protein_coding retained_intron MGP_129S1SvImJ_T0082957.1 MGP_129S1SvImJ_G0032027.1 mouse_genomes_project 7 29560479 29564873 - MGP_129S1SvImJ_P0082957 Lin37 protein_coding protein_coding MGP_129S1SvImJ_T0082958.1 MGP_129S1SvImJ_G0032027.1 mouse_genomes_project 7 29560894 29564694 - MGP_129S1SvImJ_P0082958 Lin37 protein_coding protein_coding MGP_129S1SvImJ_T0082959.1 MGP_129S1SvImJ_G0032027.1 mouse_genomes_project 7 29562127 29564674 - Lin37 protein_coding processed_transcript MGP_129S1SvImJ_T0085665.1 MGP_129S1SvImJ_G0032759.1 mouse_genomes_project 7 108903156 108906734 + MGP_129S1SvImJ_P0085665 protein_coding protein_coding MGP_129S1SvImJ_T0085666.1 MGP_129S1SvImJ_G0032759.1 mouse_genomes_project 7 108903548 108904944 + MGP_129S1SvImJ_P0085666 protein_coding protein_coding MGP_129S1SvImJ_T0085667.1 MGP_129S1SvImJ_G0032759.1 mouse_genomes_project 7 108903652 108915488 + MGP_129S1SvImJ_P0085667 protein_coding protein_coding MGP_129S1SvImJ_T0085669.1 MGP_129S1SvImJ_G0032759.1 mouse_genomes_project 7 108903664 108904886 + protein_coding retained_intron MGP_129S1SvImJ_T0085670.1 MGP_129S1SvImJ_G0032759.1 mouse_genomes_project 7 108903664 108916062 + MGP_129S1SvImJ_P0085670 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085671.1 MGP_129S1SvImJ_G0032759.1 mouse_genomes_project 7 108903667 108904940 + MGP_129S1SvImJ_P0085671 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085672.1 MGP_129S1SvImJ_G0032759.1 mouse_genomes_project 7 108903670 108920131 + MGP_129S1SvImJ_P0085672 protein_coding protein_coding MGP_129S1SvImJ_T0085673.1 MGP_129S1SvImJ_G0032759.1 mouse_genomes_project 7 108903671 108906729 + MGP_129S1SvImJ_P0085673 protein_coding protein_coding MGP_129S1SvImJ_T0085675.1 MGP_129S1SvImJ_G0032759.1 mouse_genomes_project 7 108903689 108904850 + protein_coding processed_transcript MGP_129S1SvImJ_T0085676.1 MGP_129S1SvImJ_G0032759.1 mouse_genomes_project 7 108903690 108904926 + MGP_129S1SvImJ_P0085676 protein_coding protein_coding MGP_129S1SvImJ_T0085677.1 MGP_129S1SvImJ_G0032759.1 mouse_genomes_project 7 108903771 108904385 + protein_coding retained_intron MGP_129S1SvImJ_T0085793.1 MGP_129S1SvImJ_G0032835.1 mouse_genomes_project 7 112319287 112330377 - MGP_129S1SvImJ_P0085793 Nlrp10 protein_coding protein_coding MGP_129S1SvImJ_T0002285.1 MGP_129S1SvImJ_G0002196.1 mouse_genomes_project 7 77221477 77230230 + TEC TEC MGP_129S1SvImJ_T0002265.1 MGP_129S1SvImJ_G0002177.1 mouse_genomes_project 7 65330889 65331325 - TEC TEC MGP_129S1SvImJ_T0015825.1 MGP_129S1SvImJ_G0013914.1 mouse_genomes_project 7 57685472 57686075 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0083391.1 MGP_129S1SvImJ_G0032107.1 mouse_genomes_project 7 41074594 41096338 - MGP_129S1SvImJ_P0083391 AI987944 protein_coding protein_coding MGP_129S1SvImJ_T0083392.1 MGP_129S1SvImJ_G0032107.1 mouse_genomes_project 7 41074594 41096286 - MGP_129S1SvImJ_P0083392 AI987944 protein_coding protein_coding MGP_129S1SvImJ_T0083393.1 MGP_129S1SvImJ_G0032107.1 mouse_genomes_project 7 41075461 41096405 - MGP_129S1SvImJ_P0083393 AI987944 protein_coding protein_coding MGP_129S1SvImJ_T0102753.1 MGP_129S1SvImJ_G0040585.1 mouse_genomes_project 7 47995856 47996684 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0081570.1 MGP_129S1SvImJ_G0031637.1 mouse_genomes_project 7 9295646 9296621 - MGP_129S1SvImJ_P0081570 Vmn1r76 protein_coding protein_coding MGP_129S1SvImJ_T0084651.1 MGP_129S1SvImJ_G0032413.1 mouse_genomes_project 7 82319110 82333422 - Man2a2 protein_coding retained_intron MGP_129S1SvImJ_T0084652.1 MGP_129S1SvImJ_G0032413.1 mouse_genomes_project 7 82319110 82342993 - MGP_129S1SvImJ_P0084652 Man2a2 protein_coding protein_coding MGP_129S1SvImJ_T0084653.1 MGP_129S1SvImJ_G0032413.1 mouse_genomes_project 7 82321236 82329671 - MGP_129S1SvImJ_P0084653 Man2a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084654.1 MGP_129S1SvImJ_G0032413.1 mouse_genomes_project 7 82324835 82333632 - Man2a2 protein_coding retained_intron MGP_129S1SvImJ_T0084655.1 MGP_129S1SvImJ_G0032413.1 mouse_genomes_project 7 82329059 82329837 - Man2a2 protein_coding retained_intron MGP_129S1SvImJ_T0084656.1 MGP_129S1SvImJ_G0032413.1 mouse_genomes_project 7 82329642 82333460 - MGP_129S1SvImJ_P0084656 Man2a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084657.1 MGP_129S1SvImJ_G0032413.1 mouse_genomes_project 7 82330275 82342479 - MGP_129S1SvImJ_P0084657 Man2a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084658.1 MGP_129S1SvImJ_G0032413.1 mouse_genomes_project 7 82330440 82342744 - Man2a2 protein_coding retained_intron MGP_129S1SvImJ_T0084659.1 MGP_129S1SvImJ_G0032413.1 mouse_genomes_project 7 82332625 82333620 - Man2a2 protein_coding retained_intron MGP_129S1SvImJ_T0084660.1 MGP_129S1SvImJ_G0032413.1 mouse_genomes_project 7 82341253 82342476 - MGP_129S1SvImJ_P0084660 Man2a2 protein_coding protein_coding MGP_129S1SvImJ_T0084661.1 MGP_129S1SvImJ_G0032413.1 mouse_genomes_project 7 82341281 82342700 - MGP_129S1SvImJ_P0084661 Man2a2 protein_coding protein_coding MGP_129S1SvImJ_T0099006.1 MGP_129S1SvImJ_G0037079.1 mouse_genomes_project 7 128372053 128479014 + Gm15338 sense_intronic sense_intronic MGP_129S1SvImJ_T0086793.1 MGP_129S1SvImJ_G0033041.1 mouse_genomes_project 7 131864524 131881232 + Srcap protein_coding retained_intron MGP_129S1SvImJ_T0086794.1 MGP_129S1SvImJ_G0033041.1 mouse_genomes_project 7 131864524 131888344 + MGP_129S1SvImJ_P0086794 Srcap protein_coding protein_coding MGP_129S1SvImJ_T0086795.1 MGP_129S1SvImJ_G0033041.1 mouse_genomes_project 7 131864543 131877038 + MGP_129S1SvImJ_P0086795 Srcap protein_coding protein_coding MGP_129S1SvImJ_T0086796.1 MGP_129S1SvImJ_G0033041.1 mouse_genomes_project 7 131864568 131879515 + MGP_129S1SvImJ_P0086796 Srcap protein_coding protein_coding MGP_129S1SvImJ_T0086797.1 MGP_129S1SvImJ_G0033041.1 mouse_genomes_project 7 131864653 131869428 + Srcap protein_coding processed_transcript MGP_129S1SvImJ_T0086798.1 MGP_129S1SvImJ_G0033041.1 mouse_genomes_project 7 131864842 131870011 + Srcap protein_coding processed_transcript MGP_129S1SvImJ_T0086799.1 MGP_129S1SvImJ_G0033041.1 mouse_genomes_project 7 131865006 131898258 + MGP_129S1SvImJ_P0086799 Srcap protein_coding protein_coding MGP_129S1SvImJ_T0086800.1 MGP_129S1SvImJ_G0033041.1 mouse_genomes_project 7 131865533 131895398 + Srcap protein_coding retained_intron MGP_129S1SvImJ_T0086801.1 MGP_129S1SvImJ_G0033041.1 mouse_genomes_project 7 131865533 131895398 + MGP_129S1SvImJ_P0086801 Srcap protein_coding protein_coding MGP_129S1SvImJ_T0086802.1 MGP_129S1SvImJ_G0033041.1 mouse_genomes_project 7 131865559 131920187 + MGP_129S1SvImJ_P0086802 Srcap protein_coding protein_coding MGP_129S1SvImJ_T0086803.1 MGP_129S1SvImJ_G0033041.1 mouse_genomes_project 7 131870007 131873889 + Srcap protein_coding retained_intron MGP_129S1SvImJ_T0086804.1 MGP_129S1SvImJ_G0033041.1 mouse_genomes_project 7 131870162 131919796 + MGP_129S1SvImJ_P0086804 Srcap protein_coding protein_coding MGP_129S1SvImJ_T0086805.1 MGP_129S1SvImJ_G0033041.1 mouse_genomes_project 7 131870162 131919796 + MGP_129S1SvImJ_P0086805 Srcap protein_coding protein_coding MGP_129S1SvImJ_T0086807.1 MGP_129S1SvImJ_G0033041.1 mouse_genomes_project 7 131892781 131894814 + Srcap protein_coding retained_intron MGP_129S1SvImJ_T0087485.1 MGP_129S1SvImJ_G0033211.1 mouse_genomes_project 7 146270926 146289240 - MGP_129S1SvImJ_P0087485 Ano9 protein_coding protein_coding MGP_129S1SvImJ_T0100057.1 MGP_129S1SvImJ_G0038124.1 mouse_genomes_project 7 53704352 53704460 + Gm22444 snRNA snRNA MGP_129S1SvImJ_T0082133.1 MGP_129S1SvImJ_G0031822.1 mouse_genomes_project 7 22594937 22605249 - MGP_129S1SvImJ_P0082133 Zfp61 protein_coding protein_coding MGP_129S1SvImJ_T0082134.1 MGP_129S1SvImJ_G0031822.1 mouse_genomes_project 7 22594955 22601562 - MGP_129S1SvImJ_P0082134 Zfp61 protein_coding protein_coding MGP_129S1SvImJ_T0082135.1 MGP_129S1SvImJ_G0031822.1 mouse_genomes_project 7 22594955 22604910 - MGP_129S1SvImJ_P0082135 Zfp61 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0082136.1 MGP_129S1SvImJ_G0031822.1 mouse_genomes_project 7 22595917 22601292 - Zfp61 protein_coding processed_transcript MGP_129S1SvImJ_T0082137.1 MGP_129S1SvImJ_G0031822.1 mouse_genomes_project 7 22596060 22604884 - MGP_129S1SvImJ_P0082137 Zfp61 protein_coding protein_coding MGP_129S1SvImJ_T0082138.1 MGP_129S1SvImJ_G0031822.1 mouse_genomes_project 7 22597257 22601129 - Zfp61 protein_coding retained_intron MGP_129S1SvImJ_T0082139.1 MGP_129S1SvImJ_G0031822.1 mouse_genomes_project 7 22600651 22604872 - Zfp61 protein_coding processed_transcript MGP_129S1SvImJ_T0082140.1 MGP_129S1SvImJ_G0031822.1 mouse_genomes_project 7 22600894 22604975 - Zfp61 protein_coding retained_intron MGP_129S1SvImJ_T0082141.1 MGP_129S1SvImJ_G0031822.1 mouse_genomes_project 7 22603209 22613577 - Zfp61 protein_coding processed_transcript MGP_129S1SvImJ_T0082142.1 MGP_129S1SvImJ_G0031822.1 mouse_genomes_project 7 22603672 22605211 - Zfp61 protein_coding retained_intron MGP_129S1SvImJ_T0009000.1 MGP_129S1SvImJ_G0007254.1 mouse_genomes_project 7 118645253 118686593 + A730082K24Rik lincRNA lincRNA MGP_129S1SvImJ_T0009001.1 MGP_129S1SvImJ_G0007254.1 mouse_genomes_project 7 118645291 118657500 + A730082K24Rik lincRNA lincRNA MGP_129S1SvImJ_T0009002.1 MGP_129S1SvImJ_G0007254.1 mouse_genomes_project 7 118650087 118676620 + A730082K24Rik lincRNA lincRNA MGP_129S1SvImJ_T0009003.1 MGP_129S1SvImJ_G0007254.1 mouse_genomes_project 7 118650102 118676566 + A730082K24Rik lincRNA lincRNA MGP_129S1SvImJ_T0009004.1 MGP_129S1SvImJ_G0007254.1 mouse_genomes_project 7 118650120 118685498 + A730082K24Rik lincRNA lincRNA MGP_129S1SvImJ_T0083835.1 MGP_129S1SvImJ_G0032229.1 mouse_genomes_project 7 45802813 45835308 + MGP_129S1SvImJ_P0083835 Plekha4 protein_coding protein_coding MGP_129S1SvImJ_T0083836.1 MGP_129S1SvImJ_G0032229.1 mouse_genomes_project 7 45802813 45839967 + MGP_129S1SvImJ_P0083836 Plekha4 protein_coding protein_coding MGP_129S1SvImJ_T0083837.1 MGP_129S1SvImJ_G0032229.1 mouse_genomes_project 7 45807993 45839967 + MGP_129S1SvImJ_P0083837 Plekha4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083838.1 MGP_129S1SvImJ_G0032229.1 mouse_genomes_project 7 45808040 45810343 + MGP_129S1SvImJ_P0083838 Plekha4 protein_coding protein_coding MGP_129S1SvImJ_T0083839.1 MGP_129S1SvImJ_G0032229.1 mouse_genomes_project 7 45808106 45839967 + MGP_129S1SvImJ_P0083839 Plekha4 protein_coding protein_coding MGP_129S1SvImJ_T0083840.1 MGP_129S1SvImJ_G0032229.1 mouse_genomes_project 7 45808572 45839770 + MGP_129S1SvImJ_P0083840 Plekha4 protein_coding protein_coding MGP_129S1SvImJ_T0083841.1 MGP_129S1SvImJ_G0032229.1 mouse_genomes_project 7 45835579 45839967 + Plekha4 protein_coding processed_transcript MGP_129S1SvImJ_T0083842.1 MGP_129S1SvImJ_G0032229.1 mouse_genomes_project 7 45838427 45839967 + Plekha4 protein_coding retained_intron MGP_129S1SvImJ_T0087837.1 MGP_129S1SvImJ_G0033275.1 mouse_genomes_project 7 148814944 148852851 - MGP_129S1SvImJ_P0087837 Nap1l4 protein_coding protein_coding MGP_129S1SvImJ_T0010938.1 MGP_129S1SvImJ_G0009054.1 mouse_genomes_project 7 121566287 121566392 + Gm24063 miRNA miRNA MGP_129S1SvImJ_T0002311.1 MGP_129S1SvImJ_G0002222.1 mouse_genomes_project 7 103339032 103339964 + TEC TEC MGP_129S1SvImJ_T0084488.1 MGP_129S1SvImJ_G0032383.1 mouse_genomes_project 7 80903787 80966623 + MGP_129S1SvImJ_P0084488 Acan protein_coding protein_coding MGP_129S1SvImJ_T0084489.1 MGP_129S1SvImJ_G0032383.1 mouse_genomes_project 7 80951287 80966151 + MGP_129S1SvImJ_P0084489 Acan protein_coding protein_coding MGP_129S1SvImJ_T0081732.1 MGP_129S1SvImJ_G0031699.1 mouse_genomes_project 7 13775414 13777044 + Kptn protein_coding retained_intron MGP_129S1SvImJ_T0081733.1 MGP_129S1SvImJ_G0031699.1 mouse_genomes_project 7 13775414 13782991 + MGP_129S1SvImJ_P0081733 Kptn protein_coding protein_coding MGP_129S1SvImJ_T0081734.1 MGP_129S1SvImJ_G0031699.1 mouse_genomes_project 7 13775448 13776492 + Kptn protein_coding retained_intron MGP_129S1SvImJ_T0081735.1 MGP_129S1SvImJ_G0031699.1 mouse_genomes_project 7 13775738 13779340 + Kptn protein_coding retained_intron MGP_129S1SvImJ_T0081736.1 MGP_129S1SvImJ_G0031699.1 mouse_genomes_project 7 13775970 13776483 + Kptn protein_coding retained_intron MGP_129S1SvImJ_T0081737.1 MGP_129S1SvImJ_G0031699.1 mouse_genomes_project 7 13778290 13779303 + Kptn protein_coding retained_intron MGP_129S1SvImJ_T0081738.1 MGP_129S1SvImJ_G0031699.1 mouse_genomes_project 7 13778357 13779482 + Kptn protein_coding retained_intron MGP_129S1SvImJ_T0081739.1 MGP_129S1SvImJ_G0031699.1 mouse_genomes_project 7 13780888 13782839 + Kptn protein_coding retained_intron MGP_129S1SvImJ_T0082618.1 MGP_129S1SvImJ_G0031942.1 mouse_genomes_project 7 27159522 27161996 - MGP_129S1SvImJ_P0082618 Zfp36 protein_coding protein_coding MGP_129S1SvImJ_T0015785.1 MGP_129S1SvImJ_G0013874.1 mouse_genomes_project 7 39288825 39289289 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084586.1 MGP_129S1SvImJ_G0032403.1 mouse_genomes_project 7 82146313 82189542 + MGP_129S1SvImJ_P0084586 Sema4b protein_coding protein_coding MGP_129S1SvImJ_T0084587.1 MGP_129S1SvImJ_G0032403.1 mouse_genomes_project 7 82146350 82184855 + Sema4b protein_coding retained_intron MGP_129S1SvImJ_T0084588.1 MGP_129S1SvImJ_G0032403.1 mouse_genomes_project 7 82159360 82189426 + MGP_129S1SvImJ_P0084588 Sema4b protein_coding protein_coding MGP_129S1SvImJ_T0084589.1 MGP_129S1SvImJ_G0032403.1 mouse_genomes_project 7 82159455 82177069 + Sema4b protein_coding retained_intron MGP_129S1SvImJ_T0085531.1 MGP_129S1SvImJ_G0032698.1 mouse_genomes_project 7 107281912 107282857 - MGP_129S1SvImJ_P0085531 protein_coding protein_coding MGP_129S1SvImJ_T0085962.1 MGP_129S1SvImJ_G0032876.1 mouse_genomes_project 7 117154939 117214555 + MGP_129S1SvImJ_P0085962 Far1 protein_coding protein_coding MGP_129S1SvImJ_T0085963.1 MGP_129S1SvImJ_G0032876.1 mouse_genomes_project 7 117154966 117193574 + Far1 protein_coding retained_intron MGP_129S1SvImJ_T0085964.1 MGP_129S1SvImJ_G0032876.1 mouse_genomes_project 7 117154966 117190650 + MGP_129S1SvImJ_P0085964 Far1 protein_coding protein_coding MGP_129S1SvImJ_T0085965.1 MGP_129S1SvImJ_G0032876.1 mouse_genomes_project 7 117154966 117214555 + MGP_129S1SvImJ_P0085965 Far1 protein_coding protein_coding MGP_129S1SvImJ_T0085966.1 MGP_129S1SvImJ_G0032876.1 mouse_genomes_project 7 117154967 117213502 + MGP_129S1SvImJ_P0085966 Far1 protein_coding protein_coding MGP_129S1SvImJ_T0085967.1 MGP_129S1SvImJ_G0032876.1 mouse_genomes_project 7 117154982 117193109 + MGP_129S1SvImJ_P0085967 Far1 protein_coding protein_coding MGP_129S1SvImJ_T0085968.1 MGP_129S1SvImJ_G0032876.1 mouse_genomes_project 7 117154986 117167407 + Far1 protein_coding retained_intron MGP_129S1SvImJ_T0085969.1 MGP_129S1SvImJ_G0032876.1 mouse_genomes_project 7 117155203 117182459 + MGP_129S1SvImJ_P0085969 Far1 protein_coding protein_coding MGP_129S1SvImJ_T0085970.1 MGP_129S1SvImJ_G0032876.1 mouse_genomes_project 7 117190527 117196212 + Far1 protein_coding retained_intron MGP_129S1SvImJ_T0085971.1 MGP_129S1SvImJ_G0032876.1 mouse_genomes_project 7 117203981 117211194 + Far1 protein_coding retained_intron MGP_129S1SvImJ_T0085972.1 MGP_129S1SvImJ_G0032876.1 mouse_genomes_project 7 117209143 117211249 + Far1 protein_coding retained_intron MGP_129S1SvImJ_T0085608.1 MGP_129S1SvImJ_G0032746.1 mouse_genomes_project 7 108581165 108582227 - MGP_129S1SvImJ_P0085608 Olfr690 protein_coding protein_coding MGP_129S1SvImJ_T0082214.1 MGP_129S1SvImJ_G0031844.1 mouse_genomes_project 7 23275029 23280347 - MGP_129S1SvImJ_P0082214 Lypd4 protein_coding protein_coding MGP_129S1SvImJ_T0082215.1 MGP_129S1SvImJ_G0031844.1 mouse_genomes_project 7 23275734 23280138 - MGP_129S1SvImJ_P0082215 Lypd4 protein_coding protein_coding MGP_129S1SvImJ_T0099007.1 MGP_129S1SvImJ_G0037080.1 mouse_genomes_project 7 134152990 134179687 + Gm33248 sense_intronic sense_intronic MGP_129S1SvImJ_T0086484.1 MGP_129S1SvImJ_G0032986.1 mouse_genomes_project 7 130854395 130869089 - MGP_129S1SvImJ_P0086484 Cln3 protein_coding protein_coding MGP_129S1SvImJ_T0086485.1 MGP_129S1SvImJ_G0032986.1 mouse_genomes_project 7 130854588 130866519 - MGP_129S1SvImJ_P0086485 Cln3 protein_coding protein_coding MGP_129S1SvImJ_T0086486.1 MGP_129S1SvImJ_G0032986.1 mouse_genomes_project 7 130854588 130867552 - MGP_129S1SvImJ_P0086486 Cln3 protein_coding protein_coding MGP_129S1SvImJ_T0086487.1 MGP_129S1SvImJ_G0032986.1 mouse_genomes_project 7 130855274 130866462 - MGP_129S1SvImJ_P0086487 Cln3 protein_coding protein_coding MGP_129S1SvImJ_T0086488.1 MGP_129S1SvImJ_G0032986.1 mouse_genomes_project 7 130855278 130858278 - Cln3 protein_coding processed_transcript MGP_129S1SvImJ_T0086489.1 MGP_129S1SvImJ_G0032986.1 mouse_genomes_project 7 130855296 130855917 - Cln3 protein_coding processed_transcript MGP_129S1SvImJ_T0086490.1 MGP_129S1SvImJ_G0032986.1 mouse_genomes_project 7 130855310 130861037 - Cln3 protein_coding retained_intron MGP_129S1SvImJ_T0086491.1 MGP_129S1SvImJ_G0032986.1 mouse_genomes_project 7 130861532 130867579 - Cln3 protein_coding retained_intron MGP_129S1SvImJ_T0086492.1 MGP_129S1SvImJ_G0032986.1 mouse_genomes_project 7 130862384 130866498 - Cln3 protein_coding processed_transcript MGP_129S1SvImJ_T0086493.1 MGP_129S1SvImJ_G0032986.1 mouse_genomes_project 7 130862420 130866634 - MGP_129S1SvImJ_P0086493 Cln3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086494.1 MGP_129S1SvImJ_G0032986.1 mouse_genomes_project 7 130862436 130867492 - MGP_129S1SvImJ_P0086494 Cln3 protein_coding protein_coding MGP_129S1SvImJ_T0086495.1 MGP_129S1SvImJ_G0032986.1 mouse_genomes_project 7 130862582 130866795 - MGP_129S1SvImJ_P0086495 Cln3 protein_coding protein_coding MGP_129S1SvImJ_T0086496.1 MGP_129S1SvImJ_G0032986.1 mouse_genomes_project 7 130863541 130866386 - Cln3 protein_coding retained_intron MGP_129S1SvImJ_T0086497.1 MGP_129S1SvImJ_G0032986.1 mouse_genomes_project 7 130864102 130866588 - Cln3 protein_coding retained_intron MGP_129S1SvImJ_T0086498.1 MGP_129S1SvImJ_G0032986.1 mouse_genomes_project 7 130864784 130866614 - Cln3 protein_coding processed_transcript MGP_129S1SvImJ_T0086499.1 MGP_129S1SvImJ_G0032986.1 mouse_genomes_project 7 130864929 130866838 - MGP_129S1SvImJ_P0086499 Cln3 protein_coding protein_coding MGP_129S1SvImJ_T0086500.1 MGP_129S1SvImJ_G0032986.1 mouse_genomes_project 7 130864932 130867850 - MGP_129S1SvImJ_P0086500 Cln3 protein_coding protein_coding MGP_129S1SvImJ_T0086501.1 MGP_129S1SvImJ_G0032986.1 mouse_genomes_project 7 130864986 130866826 - MGP_129S1SvImJ_P0086501 Cln3 protein_coding protein_coding MGP_129S1SvImJ_T0086502.1 MGP_129S1SvImJ_G0032986.1 mouse_genomes_project 7 130866593 130868058 - Cln3 protein_coding processed_transcript MGP_129S1SvImJ_T0101360.1 MGP_129S1SvImJ_G0039427.1 mouse_genomes_project 7 148835135 148835262 - Gm23297 snoRNA snoRNA MGP_129S1SvImJ_T0102707.1 MGP_129S1SvImJ_G0040540.1 mouse_genomes_project 7 12214467 12214828 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0005165.1 MGP_129S1SvImJ_G0004406.1 mouse_genomes_project 7 1446912 1448557 + Gm15873 antisense antisense MGP_129S1SvImJ_T0005166.1 MGP_129S1SvImJ_G0004406.1 mouse_genomes_project 7 1447010 1450950 + Gm15873 antisense antisense MGP_129S1SvImJ_T0008973.1 MGP_129S1SvImJ_G0007236.1 mouse_genomes_project 7 95568336 95665578 + Gm26862 lincRNA lincRNA MGP_129S1SvImJ_T0099000.1 MGP_129S1SvImJ_G0037074.1 mouse_genomes_project 7 80368365 80384270 - Gm44606 sense_intronic sense_intronic MGP_129S1SvImJ_T0081579.1 MGP_129S1SvImJ_G0031645.1 mouse_genomes_project 7 9803153 9810752 - MGP_129S1SvImJ_P0081579 Zfp551 protein_coding protein_coding MGP_129S1SvImJ_T0081580.1 MGP_129S1SvImJ_G0031645.1 mouse_genomes_project 7 9804949 9810489 - MGP_129S1SvImJ_P0081580 Zfp551 protein_coding protein_coding MGP_129S1SvImJ_T0081581.1 MGP_129S1SvImJ_G0031645.1 mouse_genomes_project 7 9805102 9810440 - Zfp551 protein_coding processed_transcript MGP_129S1SvImJ_T0082867.1 MGP_129S1SvImJ_G0032007.1 mouse_genomes_project 7 29213236 29214315 + MGP_129S1SvImJ_P0082867 Polr2i protein_coding protein_coding MGP_129S1SvImJ_T0082868.1 MGP_129S1SvImJ_G0032007.1 mouse_genomes_project 7 29213251 29214305 + MGP_129S1SvImJ_P0082868 Polr2i protein_coding protein_coding MGP_129S1SvImJ_T0082869.1 MGP_129S1SvImJ_G0032007.1 mouse_genomes_project 7 29213251 29214306 + MGP_129S1SvImJ_P0082869 Polr2i protein_coding protein_coding MGP_129S1SvImJ_T0082870.1 MGP_129S1SvImJ_G0032007.1 mouse_genomes_project 7 29213261 29214303 + Polr2i protein_coding retained_intron MGP_129S1SvImJ_T0082871.1 MGP_129S1SvImJ_G0032007.1 mouse_genomes_project 7 29213269 29214245 + Polr2i protein_coding retained_intron MGP_129S1SvImJ_T0082872.1 MGP_129S1SvImJ_G0032007.1 mouse_genomes_project 7 29213522 29214307 + Polr2i protein_coding processed_transcript MGP_129S1SvImJ_T0082873.1 MGP_129S1SvImJ_G0032007.1 mouse_genomes_project 7 29213851 29214302 + Polr2i protein_coding retained_intron MGP_129S1SvImJ_T0085444.1 MGP_129S1SvImJ_G0032617.1 mouse_genomes_project 7 105675258 105676212 + MGP_129S1SvImJ_P0085444 Olfr552 protein_coding protein_coding MGP_129S1SvImJ_T0102750.1 MGP_129S1SvImJ_G0040582.1 mouse_genomes_project 7 47832247 47832702 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085706.1 MGP_129S1SvImJ_G0032765.1 mouse_genomes_project 7 109022260 109058238 - MGP_129S1SvImJ_P0085706 Dchs1 protein_coding protein_coding MGP_129S1SvImJ_T0085707.1 MGP_129S1SvImJ_G0032765.1 mouse_genomes_project 7 109022261 109058342 - MGP_129S1SvImJ_P0085707 Dchs1 protein_coding protein_coding MGP_129S1SvImJ_T0085708.1 MGP_129S1SvImJ_G0032765.1 mouse_genomes_project 7 109026247 109027161 - Dchs1 protein_coding retained_intron MGP_129S1SvImJ_T0085709.1 MGP_129S1SvImJ_G0032765.1 mouse_genomes_project 7 109034246 109058240 - MGP_129S1SvImJ_P0085709 Dchs1 protein_coding protein_coding MGP_129S1SvImJ_T0085720.1 MGP_129S1SvImJ_G0032771.1 mouse_genomes_project 7 110101051 110102098 - MGP_129S1SvImJ_P0085720 Olfr697 protein_coding protein_coding MGP_129S1SvImJ_T0087690.1 MGP_129S1SvImJ_G0033247.1 mouse_genomes_project 7 147400919 147401620 - MGP_129S1SvImJ_P0087690 protein_coding protein_coding MGP_129S1SvImJ_T0005183.1 MGP_129S1SvImJ_G0004416.1 mouse_genomes_project 7 17867739 17869813 + Gm16174 antisense antisense MGP_129S1SvImJ_T0085141.1 MGP_129S1SvImJ_G0032550.1 mouse_genomes_project 7 102266278 102274238 + MGP_129S1SvImJ_P0085141 Klhl35 protein_coding protein_coding MGP_129S1SvImJ_T0085142.1 MGP_129S1SvImJ_G0032550.1 mouse_genomes_project 7 102269181 102272002 + MGP_129S1SvImJ_P0085142 Klhl35 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085143.1 MGP_129S1SvImJ_G0032550.1 mouse_genomes_project 7 102270170 102272089 + Klhl35 protein_coding retained_intron MGP_129S1SvImJ_T0085144.1 MGP_129S1SvImJ_G0032550.1 mouse_genomes_project 7 102272041 102273820 + MGP_129S1SvImJ_P0085144 Klhl35 protein_coding protein_coding MGP_129S1SvImJ_T0085925.1 MGP_129S1SvImJ_G0032868.1 mouse_genomes_project 7 115786193 115922293 + MGP_129S1SvImJ_P0085925 Mical2 protein_coding protein_coding MGP_129S1SvImJ_T0085926.1 MGP_129S1SvImJ_G0032868.1 mouse_genomes_project 7 115786227 115913900 + MGP_129S1SvImJ_P0085926 Mical2 protein_coding protein_coding MGP_129S1SvImJ_T0085927.1 MGP_129S1SvImJ_G0032868.1 mouse_genomes_project 7 115786227 115879636 + MGP_129S1SvImJ_P0085927 Mical2 protein_coding protein_coding MGP_129S1SvImJ_T0085928.1 MGP_129S1SvImJ_G0032868.1 mouse_genomes_project 7 115833581 115921074 + MGP_129S1SvImJ_P0085928 Mical2 protein_coding protein_coding MGP_129S1SvImJ_T0085929.1 MGP_129S1SvImJ_G0032868.1 mouse_genomes_project 7 115880249 115913023 + Mical2 protein_coding retained_intron MGP_129S1SvImJ_T0085930.1 MGP_129S1SvImJ_G0032868.1 mouse_genomes_project 7 115912260 115922293 + MGP_129S1SvImJ_P0085930 Mical2 protein_coding protein_coding MGP_129S1SvImJ_T0084255.1 MGP_129S1SvImJ_G0032340.1 mouse_genomes_project 7 65901366 66328211 - MGP_129S1SvImJ_P0084255 Fam189a1 protein_coding protein_coding MGP_129S1SvImJ_T0084256.1 MGP_129S1SvImJ_G0032340.1 mouse_genomes_project 7 65901388 65922438 - Fam189a1 protein_coding processed_transcript MGP_129S1SvImJ_T0084257.1 MGP_129S1SvImJ_G0032340.1 mouse_genomes_project 7 65916513 66081608 - MGP_129S1SvImJ_P0084257 Fam189a1 protein_coding protein_coding MGP_129S1SvImJ_T0084258.1 MGP_129S1SvImJ_G0032340.1 mouse_genomes_project 7 65935475 66328057 - MGP_129S1SvImJ_P0084258 Fam189a1 protein_coding protein_coding MGP_129S1SvImJ_T0084259.1 MGP_129S1SvImJ_G0032340.1 mouse_genomes_project 7 65972851 66008939 - Fam189a1 protein_coding retained_intron MGP_129S1SvImJ_T0087259.1 MGP_129S1SvImJ_G0033132.1 mouse_genomes_project 7 140249394 140252597 + MGP_129S1SvImJ_P0087259 protein_coding protein_coding MGP_129S1SvImJ_T0008912.1 MGP_129S1SvImJ_G0007196.1 mouse_genomes_project 7 72851397 72860865 + lincRNA lincRNA MGP_129S1SvImJ_T0002266.1 MGP_129S1SvImJ_G0002178.1 mouse_genomes_project 7 65343325 65343478 + TEC TEC MGP_129S1SvImJ_T0005243.1 MGP_129S1SvImJ_G0004460.1 mouse_genomes_project 7 73627351 73630048 + Gm45107 antisense antisense MGP_129S1SvImJ_T0083782.1 MGP_129S1SvImJ_G0032217.1 mouse_genomes_project 7 45625973 45645156 - MGP_129S1SvImJ_P0083782 Snrnp70 protein_coding protein_coding MGP_129S1SvImJ_T0083783.1 MGP_129S1SvImJ_G0032217.1 mouse_genomes_project 7 45625979 45633406 - MGP_129S1SvImJ_P0083783 Snrnp70 protein_coding protein_coding MGP_129S1SvImJ_T0083784.1 MGP_129S1SvImJ_G0032217.1 mouse_genomes_project 7 45625982 45645072 - Snrnp70 protein_coding retained_intron MGP_129S1SvImJ_T0083785.1 MGP_129S1SvImJ_G0032217.1 mouse_genomes_project 7 45625983 45645106 - Snrnp70 protein_coding retained_intron MGP_129S1SvImJ_T0083786.1 MGP_129S1SvImJ_G0032217.1 mouse_genomes_project 7 45626666 45641683 - MGP_129S1SvImJ_P0083786 Snrnp70 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083787.1 MGP_129S1SvImJ_G0032217.1 mouse_genomes_project 7 45630873 45633795 - Snrnp70 protein_coding retained_intron MGP_129S1SvImJ_T0083788.1 MGP_129S1SvImJ_G0032217.1 mouse_genomes_project 7 45633060 45644161 - Snrnp70 protein_coding retained_intron MGP_129S1SvImJ_T0083789.1 MGP_129S1SvImJ_G0032217.1 mouse_genomes_project 7 45633228 45637132 - Snrnp70 protein_coding retained_intron MGP_129S1SvImJ_T0083790.1 MGP_129S1SvImJ_G0032217.1 mouse_genomes_project 7 45633278 45644538 - MGP_129S1SvImJ_P0083790 Snrnp70 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083791.1 MGP_129S1SvImJ_G0032217.1 mouse_genomes_project 7 45633293 45644560 - MGP_129S1SvImJ_P0083791 Snrnp70 protein_coding protein_coding MGP_129S1SvImJ_T0083792.1 MGP_129S1SvImJ_G0032217.1 mouse_genomes_project 7 45636310 45644081 - Snrnp70 protein_coding retained_intron MGP_129S1SvImJ_T0083793.1 MGP_129S1SvImJ_G0032217.1 mouse_genomes_project 7 45636751 45645123 - MGP_129S1SvImJ_P0083793 Snrnp70 protein_coding protein_coding MGP_129S1SvImJ_T0083794.1 MGP_129S1SvImJ_G0032217.1 mouse_genomes_project 7 45636795 45642140 - Snrnp70 protein_coding processed_transcript MGP_129S1SvImJ_T0083795.1 MGP_129S1SvImJ_G0032217.1 mouse_genomes_project 7 45640349 45642246 - Snrnp70 protein_coding retained_intron MGP_129S1SvImJ_T0083796.1 MGP_129S1SvImJ_G0032217.1 mouse_genomes_project 7 45641185 45644971 - Snrnp70 protein_coding retained_intron MGP_129S1SvImJ_T0002222.1 MGP_129S1SvImJ_G0002134.1 mouse_genomes_project 7 16787829 16789066 + TEC TEC MGP_129S1SvImJ_T0101974.1 MGP_129S1SvImJ_G0039850.1 mouse_genomes_project 7 39080144 39108168 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101975.1 MGP_129S1SvImJ_G0039850.1 mouse_genomes_project 7 39090450 39105618 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0085503.1 MGP_129S1SvImJ_G0032672.1 mouse_genomes_project 7 106772890 106773832 - MGP_129S1SvImJ_P0085503 Olfr620 protein_coding protein_coding MGP_129S1SvImJ_T0085020.1 MGP_129S1SvImJ_G0032524.1 mouse_genomes_project 7 100106413 100111183 - MGP_129S1SvImJ_P0085020 Thrsp protein_coding protein_coding MGP_129S1SvImJ_T0085021.1 MGP_129S1SvImJ_G0032524.1 mouse_genomes_project 7 100109603 100110972 - Thrsp protein_coding retained_intron MGP_129S1SvImJ_T0083870.1 MGP_129S1SvImJ_G0032239.1 mouse_genomes_project 7 45988345 45998923 + MGP_129S1SvImJ_P0083870 Ntn5 protein_coding protein_coding MGP_129S1SvImJ_T0083871.1 MGP_129S1SvImJ_G0032239.1 mouse_genomes_project 7 45988727 45998926 + MGP_129S1SvImJ_P0083871 Ntn5 protein_coding protein_coding MGP_129S1SvImJ_T0083872.1 MGP_129S1SvImJ_G0032239.1 mouse_genomes_project 7 45988740 45998797 + MGP_129S1SvImJ_P0083872 Ntn5 protein_coding protein_coding MGP_129S1SvImJ_T0018386.1 MGP_129S1SvImJ_G0015666.1 mouse_genomes_project 7 45615726 45617519 + Mtag2 processed_transcript processed_transcript MGP_129S1SvImJ_T0018387.1 MGP_129S1SvImJ_G0015666.1 mouse_genomes_project 7 45616803 45617519 + Mtag2 processed_transcript pseudogene MGP_129S1SvImJ_T0010909.1 MGP_129S1SvImJ_G0009025.1 mouse_genomes_project 7 62892464 62892556 - Mir344c miRNA miRNA MGP_129S1SvImJ_T0087849.1 MGP_129S1SvImJ_G0033279.1 mouse_genomes_project 7 148964471 149011756 - MGP_129S1SvImJ_P0087849 protein_coding protein_coding MGP_129S1SvImJ_T0087850.1 MGP_129S1SvImJ_G0033279.1 mouse_genomes_project 7 148992024 149011744 - MGP_129S1SvImJ_P0087850 protein_coding protein_coding MGP_129S1SvImJ_T0087851.1 MGP_129S1SvImJ_G0033279.1 mouse_genomes_project 7 148992904 149011747 - MGP_129S1SvImJ_P0087851 protein_coding protein_coding MGP_129S1SvImJ_T0087853.1 MGP_129S1SvImJ_G0033279.1 mouse_genomes_project 7 148999068 149011718 - protein_coding processed_transcript MGP_129S1SvImJ_T0083693.1 MGP_129S1SvImJ_G0032185.1 mouse_genomes_project 7 45105319 45109881 + MGP_129S1SvImJ_P0083693 Fuz protein_coding protein_coding MGP_129S1SvImJ_T0098384.1 MGP_129S1SvImJ_G0036469.1 mouse_genomes_project 7 111568341 111569399 + pseudogene pseudogene MGP_129S1SvImJ_T0082100.1 MGP_129S1SvImJ_G0031810.1 mouse_genomes_project 7 21920791 21926234 + MGP_129S1SvImJ_P0082100 Vmn1r173 protein_coding protein_coding MGP_129S1SvImJ_T0005249.1 MGP_129S1SvImJ_G0004465.1 mouse_genomes_project 7 80388433 80390642 + Gm9885 antisense antisense MGP_129S1SvImJ_T0005250.1 MGP_129S1SvImJ_G0004465.1 mouse_genomes_project 7 80388433 80390638 + Gm9885 antisense antisense MGP_129S1SvImJ_T0102702.1 MGP_129S1SvImJ_G0040535.1 mouse_genomes_project 7 12057053 12057753 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015729.1 MGP_129S1SvImJ_G0013818.1 mouse_genomes_project 7 11728278 11730437 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008870.1 MGP_129S1SvImJ_G0007166.1 mouse_genomes_project 7 41096723 41100243 + Gm17102 lincRNA lincRNA MGP_129S1SvImJ_T0086421.1 MGP_129S1SvImJ_G0032974.1 mouse_genomes_project 7 130521909 130546274 + MGP_129S1SvImJ_P0086421 Sbk1 protein_coding protein_coding MGP_129S1SvImJ_T0086422.1 MGP_129S1SvImJ_G0032974.1 mouse_genomes_project 7 130522690 130541188 + MGP_129S1SvImJ_P0086422 Sbk1 protein_coding protein_coding MGP_129S1SvImJ_T0086423.1 MGP_129S1SvImJ_G0032974.1 mouse_genomes_project 7 130542337 130544078 + MGP_129S1SvImJ_P0086423 Sbk1 protein_coding protein_coding MGP_129S1SvImJ_T0010883.1 MGP_129S1SvImJ_G0008999.1 mouse_genomes_project 7 43471286 43471359 + Mir7051 miRNA miRNA MGP_129S1SvImJ_T0087178.1 MGP_129S1SvImJ_G0033117.1 mouse_genomes_project 7 137569588 137595882 + MGP_129S1SvImJ_P0087178 Fam175b protein_coding protein_coding MGP_129S1SvImJ_T0087179.1 MGP_129S1SvImJ_G0033117.1 mouse_genomes_project 7 137569600 137591381 + MGP_129S1SvImJ_P0087179 Fam175b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087180.1 MGP_129S1SvImJ_G0033117.1 mouse_genomes_project 7 137569607 137592082 + MGP_129S1SvImJ_P0087180 Fam175b protein_coding protein_coding MGP_129S1SvImJ_T0087181.1 MGP_129S1SvImJ_G0033117.1 mouse_genomes_project 7 137569612 137586231 + Fam175b protein_coding retained_intron MGP_129S1SvImJ_T0087182.1 MGP_129S1SvImJ_G0033117.1 mouse_genomes_project 7 137569612 137595879 + MGP_129S1SvImJ_P0087182 Fam175b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087183.1 MGP_129S1SvImJ_G0033117.1 mouse_genomes_project 7 137569670 137589114 + Fam175b protein_coding processed_transcript MGP_129S1SvImJ_T0087184.1 MGP_129S1SvImJ_G0033117.1 mouse_genomes_project 7 137589874 137595881 + Fam175b protein_coding retained_intron MGP_129S1SvImJ_T0015804.1 MGP_129S1SvImJ_G0013893.1 mouse_genomes_project 7 43403863 43404593 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102665.1 MGP_129S1SvImJ_G0040498.1 mouse_genomes_project 7 159001 159845 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0084248.1 MGP_129S1SvImJ_G0032339.1 mouse_genomes_project 7 65646610 65899143 + MGP_129S1SvImJ_P0084248 Apba2 protein_coding protein_coding MGP_129S1SvImJ_T0084249.1 MGP_129S1SvImJ_G0032339.1 mouse_genomes_project 7 65646853 65839233 + MGP_129S1SvImJ_P0084249 Apba2 protein_coding protein_coding MGP_129S1SvImJ_T0084250.1 MGP_129S1SvImJ_G0032339.1 mouse_genomes_project 7 65647042 65839297 + MGP_129S1SvImJ_P0084250 Apba2 protein_coding protein_coding MGP_129S1SvImJ_T0084251.1 MGP_129S1SvImJ_G0032339.1 mouse_genomes_project 7 65773777 65899123 + MGP_129S1SvImJ_P0084251 Apba2 protein_coding protein_coding MGP_129S1SvImJ_T0084252.1 MGP_129S1SvImJ_G0032339.1 mouse_genomes_project 7 65873321 65888431 + Apba2 protein_coding processed_transcript MGP_129S1SvImJ_T0084253.1 MGP_129S1SvImJ_G0032339.1 mouse_genomes_project 7 65887751 65898639 + Apba2 protein_coding processed_transcript MGP_129S1SvImJ_T0084254.1 MGP_129S1SvImJ_G0032339.1 mouse_genomes_project 7 65888495 65898678 + MGP_129S1SvImJ_P0084254 Apba2 protein_coding protein_coding MGP_129S1SvImJ_T0087150.1 MGP_129S1SvImJ_G0033109.1 mouse_genomes_project 7 136636839 136668263 + MGP_129S1SvImJ_P0087150 Gpr26 protein_coding protein_coding MGP_129S1SvImJ_T0087275.1 MGP_129S1SvImJ_G0033141.1 mouse_genomes_project 7 143179717 143366055 - MGP_129S1SvImJ_P0087275 Tcerg1l protein_coding protein_coding MGP_129S1SvImJ_T0087276.1 MGP_129S1SvImJ_G0033141.1 mouse_genomes_project 7 143180460 143237620 - Tcerg1l protein_coding processed_transcript MGP_129S1SvImJ_T0087277.1 MGP_129S1SvImJ_G0033141.1 mouse_genomes_project 7 143229294 143366057 - Tcerg1l protein_coding retained_intron MGP_129S1SvImJ_T0086698.1 MGP_129S1SvImJ_G0033018.1 mouse_genomes_project 7 131342836 131344065 - MGP_129S1SvImJ_P0086698 Kif22 protein_coding protein_coding MGP_129S1SvImJ_T0086699.1 MGP_129S1SvImJ_G0033018.1 mouse_genomes_project 7 131342838 131357456 - MGP_129S1SvImJ_P0086699 Kif22 protein_coding protein_coding MGP_129S1SvImJ_T0086700.1 MGP_129S1SvImJ_G0033018.1 mouse_genomes_project 7 131342839 131343224 - Kif22 protein_coding retained_intron MGP_129S1SvImJ_T0086701.1 MGP_129S1SvImJ_G0033018.1 mouse_genomes_project 7 131344211 131347812 - Kif22 protein_coding retained_intron MGP_129S1SvImJ_T0086702.1 MGP_129S1SvImJ_G0033018.1 mouse_genomes_project 7 131347335 131357394 - Kif22 protein_coding retained_intron MGP_129S1SvImJ_T0086703.1 MGP_129S1SvImJ_G0033018.1 mouse_genomes_project 7 131348692 131357391 - MGP_129S1SvImJ_P0086703 Kif22 protein_coding protein_coding MGP_129S1SvImJ_T0018377.1 MGP_129S1SvImJ_G0015663.1 mouse_genomes_project 7 44392524 44410463 + Gm28496 processed_transcript processed_transcript MGP_129S1SvImJ_T0018378.1 MGP_129S1SvImJ_G0015663.1 mouse_genomes_project 7 44392572 44409631 + Gm28496 processed_transcript processed_transcript MGP_129S1SvImJ_T0015777.1 MGP_129S1SvImJ_G0013866.1 mouse_genomes_project 7 33433228 33433561 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085536.1 MGP_129S1SvImJ_G0032703.1 mouse_genomes_project 7 107364208 107366865 - MGP_129S1SvImJ_P0085536 Ubqln3 protein_coding protein_coding MGP_129S1SvImJ_T0083632.1 MGP_129S1SvImJ_G0032176.1 mouse_genomes_project 7 44927430 44943287 - MGP_129S1SvImJ_P0083632 Zfp473 protein_coding protein_coding MGP_129S1SvImJ_T0083633.1 MGP_129S1SvImJ_G0032176.1 mouse_genomes_project 7 44927440 44947614 - MGP_129S1SvImJ_P0083633 Zfp473 protein_coding protein_coding MGP_129S1SvImJ_T0083634.1 MGP_129S1SvImJ_G0032176.1 mouse_genomes_project 7 44927452 44947388 - MGP_129S1SvImJ_P0083634 Zfp473 protein_coding protein_coding MGP_129S1SvImJ_T0083635.1 MGP_129S1SvImJ_G0032176.1 mouse_genomes_project 7 44927464 44947046 - MGP_129S1SvImJ_P0083635 Zfp473 protein_coding protein_coding MGP_129S1SvImJ_T0083636.1 MGP_129S1SvImJ_G0032176.1 mouse_genomes_project 7 44927958 44947303 - MGP_129S1SvImJ_P0083636 Zfp473 protein_coding protein_coding MGP_129S1SvImJ_T0083637.1 MGP_129S1SvImJ_G0032176.1 mouse_genomes_project 7 44930408 44947346 - MGP_129S1SvImJ_P0083637 Zfp473 protein_coding protein_coding MGP_129S1SvImJ_T0083638.1 MGP_129S1SvImJ_G0032176.1 mouse_genomes_project 7 44930559 44950047 - MGP_129S1SvImJ_P0083638 Zfp473 protein_coding protein_coding MGP_129S1SvImJ_T0083308.1 MGP_129S1SvImJ_G0032091.1 mouse_genomes_project 7 34941212 34950330 - MGP_129S1SvImJ_P0083308 Nudt19 protein_coding protein_coding MGP_129S1SvImJ_T0083309.1 MGP_129S1SvImJ_G0032091.1 mouse_genomes_project 7 34941548 34949220 - Nudt19 protein_coding processed_transcript MGP_129S1SvImJ_T0083310.1 MGP_129S1SvImJ_G0032091.1 mouse_genomes_project 7 34942003 34946071 - Nudt19 protein_coding retained_intron MGP_129S1SvImJ_T0084850.1 MGP_129S1SvImJ_G0032458.1 mouse_genomes_project 7 86426747 86589690 - MGP_129S1SvImJ_P0084850 Arnt2 protein_coding protein_coding MGP_129S1SvImJ_T0082196.1 MGP_129S1SvImJ_G0031836.1 mouse_genomes_project 7 22912649 22941931 + MGP_129S1SvImJ_P0082196 Ethe1 protein_coding protein_coding MGP_129S1SvImJ_T0086028.1 MGP_129S1SvImJ_G0032889.1 mouse_genomes_project 7 119853727 119972389 - MGP_129S1SvImJ_P0086028 Plekha7 protein_coding protein_coding MGP_129S1SvImJ_T0086029.1 MGP_129S1SvImJ_G0032889.1 mouse_genomes_project 7 119853735 120051638 - MGP_129S1SvImJ_P0086029 Plekha7 protein_coding protein_coding MGP_129S1SvImJ_T0086030.1 MGP_129S1SvImJ_G0032889.1 mouse_genomes_project 7 119853768 119862919 - MGP_129S1SvImJ_P0086030 Plekha7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0086031.1 MGP_129S1SvImJ_G0032889.1 mouse_genomes_project 7 119856276 119921117 - MGP_129S1SvImJ_P0086031 Plekha7 protein_coding protein_coding MGP_129S1SvImJ_T0086032.1 MGP_129S1SvImJ_G0032889.1 mouse_genomes_project 7 119864004 119931758 - MGP_129S1SvImJ_P0086032 Plekha7 protein_coding protein_coding MGP_129S1SvImJ_T0086033.1 MGP_129S1SvImJ_G0032889.1 mouse_genomes_project 7 119864008 119921395 - MGP_129S1SvImJ_P0086033 Plekha7 protein_coding protein_coding MGP_129S1SvImJ_T0086034.1 MGP_129S1SvImJ_G0032889.1 mouse_genomes_project 7 119865147 120051638 - MGP_129S1SvImJ_P0086034 Plekha7 protein_coding protein_coding MGP_129S1SvImJ_T0086035.1 MGP_129S1SvImJ_G0032889.1 mouse_genomes_project 7 119865244 119972108 - MGP_129S1SvImJ_P0086035 Plekha7 protein_coding protein_coding MGP_129S1SvImJ_T0086036.1 MGP_129S1SvImJ_G0032889.1 mouse_genomes_project 7 119872944 119888151 - MGP_129S1SvImJ_P0086036 Plekha7 protein_coding protein_coding MGP_129S1SvImJ_T0086037.1 MGP_129S1SvImJ_G0032889.1 mouse_genomes_project 7 119886327 119972243 - Plekha7 protein_coding retained_intron MGP_129S1SvImJ_T0086038.1 MGP_129S1SvImJ_G0032889.1 mouse_genomes_project 7 119893458 119894402 - Plekha7 protein_coding retained_intron MGP_129S1SvImJ_T0086039.1 MGP_129S1SvImJ_G0032889.1 mouse_genomes_project 7 119894778 119916307 - Plekha7 protein_coding processed_transcript MGP_129S1SvImJ_T0086040.1 MGP_129S1SvImJ_G0032889.1 mouse_genomes_project 7 119901060 119995140 - MGP_129S1SvImJ_P0086040 Plekha7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086041.1 MGP_129S1SvImJ_G0032889.1 mouse_genomes_project 7 119901183 119918796 - Plekha7 protein_coding processed_transcript MGP_129S1SvImJ_T0086042.1 MGP_129S1SvImJ_G0032889.1 mouse_genomes_project 7 119907526 120051532 - MGP_129S1SvImJ_P0086042 Plekha7 protein_coding protein_coding MGP_129S1SvImJ_T0086043.1 MGP_129S1SvImJ_G0032889.1 mouse_genomes_project 7 119908701 120051341 - Plekha7 protein_coding retained_intron MGP_129S1SvImJ_T0086044.1 MGP_129S1SvImJ_G0032889.1 mouse_genomes_project 7 119908747 119912503 - Plekha7 protein_coding retained_intron MGP_129S1SvImJ_T0086045.1 MGP_129S1SvImJ_G0032889.1 mouse_genomes_project 7 119913070 120001158 - Plekha7 protein_coding processed_transcript MGP_129S1SvImJ_T0086443.1 MGP_129S1SvImJ_G0032978.1 mouse_genomes_project 7 130676600 130682984 - Cd19 protein_coding retained_intron MGP_129S1SvImJ_T0086444.1 MGP_129S1SvImJ_G0032978.1 mouse_genomes_project 7 130676601 130683005 - MGP_129S1SvImJ_P0086444 Cd19 protein_coding protein_coding MGP_129S1SvImJ_T0086445.1 MGP_129S1SvImJ_G0032978.1 mouse_genomes_project 7 130676601 130682988 - MGP_129S1SvImJ_P0086445 Cd19 protein_coding protein_coding MGP_129S1SvImJ_T0086446.1 MGP_129S1SvImJ_G0032978.1 mouse_genomes_project 7 130677512 130677947 - Cd19 protein_coding retained_intron MGP_129S1SvImJ_T0086447.1 MGP_129S1SvImJ_G0032978.1 mouse_genomes_project 7 130681781 130682670 - Cd19 protein_coding retained_intron MGP_129S1SvImJ_T0083987.1 MGP_129S1SvImJ_G0032269.1 mouse_genomes_project 7 47119259 47123669 - MGP_129S1SvImJ_P0083987 Saa4 protein_coding protein_coding MGP_129S1SvImJ_T0081895.1 MGP_129S1SvImJ_G0031748.1 mouse_genomes_project 7 16859357 16904586 + MGP_129S1SvImJ_P0081895 protein_coding protein_coding MGP_129S1SvImJ_T0083676.1 MGP_129S1SvImJ_G0032182.1 mouse_genomes_project 7 45065163 45070687 + MGP_129S1SvImJ_P0083676 Pnkp protein_coding protein_coding MGP_129S1SvImJ_T0083677.1 MGP_129S1SvImJ_G0032182.1 mouse_genomes_project 7 45065175 45065530 + MGP_129S1SvImJ_P0083677 Pnkp protein_coding protein_coding MGP_129S1SvImJ_T0083678.1 MGP_129S1SvImJ_G0032182.1 mouse_genomes_project 7 45065183 45071029 + MGP_129S1SvImJ_P0083678 Pnkp protein_coding protein_coding MGP_129S1SvImJ_T0083679.1 MGP_129S1SvImJ_G0032182.1 mouse_genomes_project 7 45065191 45070693 + Pnkp protein_coding retained_intron MGP_129S1SvImJ_T0083680.1 MGP_129S1SvImJ_G0032182.1 mouse_genomes_project 7 45065197 45068461 + MGP_129S1SvImJ_P0083680 Pnkp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083681.1 MGP_129S1SvImJ_G0032182.1 mouse_genomes_project 7 45065364 45069388 + MGP_129S1SvImJ_P0083681 Pnkp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083682.1 MGP_129S1SvImJ_G0032182.1 mouse_genomes_project 7 45065366 45070686 + MGP_129S1SvImJ_P0083682 Pnkp protein_coding protein_coding MGP_129S1SvImJ_T0083683.1 MGP_129S1SvImJ_G0032182.1 mouse_genomes_project 7 45065372 45070687 + MGP_129S1SvImJ_P0083683 Pnkp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083684.1 MGP_129S1SvImJ_G0032182.1 mouse_genomes_project 7 45065403 45070678 + MGP_129S1SvImJ_P0083684 Pnkp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083685.1 MGP_129S1SvImJ_G0032182.1 mouse_genomes_project 7 45065418 45070687 + MGP_129S1SvImJ_P0083685 Pnkp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083686.1 MGP_129S1SvImJ_G0032182.1 mouse_genomes_project 7 45067707 45070685 + Pnkp protein_coding retained_intron MGP_129S1SvImJ_T0083687.1 MGP_129S1SvImJ_G0032182.1 mouse_genomes_project 7 45068459 45069406 + Pnkp protein_coding retained_intron MGP_129S1SvImJ_T0083688.1 MGP_129S1SvImJ_G0032182.1 mouse_genomes_project 7 45069411 45070687 + MGP_129S1SvImJ_P0083688 Pnkp protein_coding non_stop_decay MGP_129S1SvImJ_T0083689.1 MGP_129S1SvImJ_G0032182.1 mouse_genomes_project 7 45069550 45070685 + MGP_129S1SvImJ_P0083689 Pnkp protein_coding protein_coding MGP_129S1SvImJ_T0083690.1 MGP_129S1SvImJ_G0032182.1 mouse_genomes_project 7 45069733 45070707 + Pnkp protein_coding retained_intron MGP_129S1SvImJ_T0081741.1 MGP_129S1SvImJ_G0031701.1 mouse_genomes_project 7 13832273 13836003 + MGP_129S1SvImJ_P0081741 Meis3 protein_coding protein_coding MGP_129S1SvImJ_T0081742.1 MGP_129S1SvImJ_G0031701.1 mouse_genomes_project 7 13832322 13836001 + MGP_129S1SvImJ_P0081742 Meis3 protein_coding protein_coding MGP_129S1SvImJ_T0081743.1 MGP_129S1SvImJ_G0031701.1 mouse_genomes_project 7 13832458 13847363 + MGP_129S1SvImJ_P0081743 Meis3 protein_coding protein_coding MGP_129S1SvImJ_T0081744.1 MGP_129S1SvImJ_G0031701.1 mouse_genomes_project 7 13832571 13847360 + Meis3 protein_coding retained_intron MGP_129S1SvImJ_T0081745.1 MGP_129S1SvImJ_G0031701.1 mouse_genomes_project 7 13832613 13847363 + MGP_129S1SvImJ_P0081745 Meis3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081746.1 MGP_129S1SvImJ_G0031701.1 mouse_genomes_project 7 13832613 13847363 + MGP_129S1SvImJ_P0081746 Meis3 protein_coding protein_coding MGP_129S1SvImJ_T0081747.1 MGP_129S1SvImJ_G0031701.1 mouse_genomes_project 7 13834908 13835644 + Meis3 protein_coding retained_intron MGP_129S1SvImJ_T0081748.1 MGP_129S1SvImJ_G0031701.1 mouse_genomes_project 7 13836250 13846374 + MGP_129S1SvImJ_P0081748 Meis3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081749.1 MGP_129S1SvImJ_G0031701.1 mouse_genomes_project 7 13843266 13847363 + Meis3 protein_coding retained_intron MGP_129S1SvImJ_T0085502.1 MGP_129S1SvImJ_G0032671.1 mouse_genomes_project 7 106759972 106760935 + MGP_129S1SvImJ_P0085502 Olfr619 protein_coding protein_coding MGP_129S1SvImJ_T0084416.1 MGP_129S1SvImJ_G0032371.1 mouse_genomes_project 7 75527774 75602443 - MGP_129S1SvImJ_P0084416 St8sia2 protein_coding protein_coding MGP_129S1SvImJ_T0084417.1 MGP_129S1SvImJ_G0032371.1 mouse_genomes_project 7 75549486 75602459 - MGP_129S1SvImJ_P0084417 St8sia2 protein_coding protein_coding MGP_129S1SvImJ_T0085591.1 MGP_129S1SvImJ_G0032729.1 mouse_genomes_project 7 108076274 108077549 - MGP_129S1SvImJ_P0085591 Olfr666 protein_coding protein_coding MGP_129S1SvImJ_T0002310.1 MGP_129S1SvImJ_G0002221.1 mouse_genomes_project 7 95192526 95196171 + TEC TEC MGP_129S1SvImJ_T0086314.1 MGP_129S1SvImJ_G0032957.1 mouse_genomes_project 7 126771658 126879373 + MGP_129S1SvImJ_P0086314 Cacng3 protein_coding protein_coding MGP_129S1SvImJ_T0086315.1 MGP_129S1SvImJ_G0032957.1 mouse_genomes_project 7 126772557 126878401 + MGP_129S1SvImJ_P0086315 Cacng3 protein_coding protein_coding MGP_129S1SvImJ_T0086316.1 MGP_129S1SvImJ_G0032957.1 mouse_genomes_project 7 126772584 126878520 + MGP_129S1SvImJ_P0086316 Cacng3 protein_coding protein_coding MGP_129S1SvImJ_T0084758.1 MGP_129S1SvImJ_G0032429.1 mouse_genomes_project 7 83520225 83525122 - Ap3b2 protein_coding retained_intron MGP_129S1SvImJ_T0084759.1 MGP_129S1SvImJ_G0032429.1 mouse_genomes_project 7 83520227 83557984 - MGP_129S1SvImJ_P0084759 Ap3b2 protein_coding protein_coding MGP_129S1SvImJ_T0084760.1 MGP_129S1SvImJ_G0032429.1 mouse_genomes_project 7 83534218 83557765 - Ap3b2 protein_coding retained_intron MGP_129S1SvImJ_T0084761.1 MGP_129S1SvImJ_G0032429.1 mouse_genomes_project 7 83540283 83541571 - Ap3b2 protein_coding processed_transcript MGP_129S1SvImJ_T0084762.1 MGP_129S1SvImJ_G0032429.1 mouse_genomes_project 7 83542802 83557842 - MGP_129S1SvImJ_P0084762 Ap3b2 protein_coding protein_coding MGP_129S1SvImJ_T0008816.1 MGP_129S1SvImJ_G0007121.1 mouse_genomes_project 7 16901743 16904439 - Gm26821 lincRNA lincRNA MGP_129S1SvImJ_T0005330.1 MGP_129S1SvImJ_G0004522.1 mouse_genomes_project 7 147926972 147938745 + Igf2os antisense antisense MGP_129S1SvImJ_T0005331.1 MGP_129S1SvImJ_G0004522.1 mouse_genomes_project 7 147926991 147927984 + Igf2os antisense antisense MGP_129S1SvImJ_T0005332.1 MGP_129S1SvImJ_G0004522.1 mouse_genomes_project 7 147932458 147933413 + Igf2os antisense antisense MGP_129S1SvImJ_T0083475.1 MGP_129S1SvImJ_G0032131.1 mouse_genomes_project 7 43584809 43598015 + MGP_129S1SvImJ_P0083475 Zfp658 protein_coding protein_coding MGP_129S1SvImJ_T0083476.1 MGP_129S1SvImJ_G0032131.1 mouse_genomes_project 7 43587337 43597520 + MGP_129S1SvImJ_P0083476 Zfp658 protein_coding protein_coding MGP_129S1SvImJ_T0081317.1 MGP_129S1SvImJ_G0031543.1 mouse_genomes_project 7 1281208 1311929 - MGP_129S1SvImJ_P0081317 Gp6 protein_coding protein_coding MGP_129S1SvImJ_T0081318.1 MGP_129S1SvImJ_G0031543.1 mouse_genomes_project 7 1286078 1311913 - MGP_129S1SvImJ_P0081318 Gp6 protein_coding protein_coding MGP_129S1SvImJ_T0087043.1 MGP_129S1SvImJ_G0033087.1 mouse_genomes_project 7 133181333 133222597 + MGP_129S1SvImJ_P0087043 Sec23ip protein_coding protein_coding MGP_129S1SvImJ_T0087044.1 MGP_129S1SvImJ_G0033087.1 mouse_genomes_project 7 133181367 133186126 + Sec23ip protein_coding retained_intron MGP_129S1SvImJ_T0087045.1 MGP_129S1SvImJ_G0033087.1 mouse_genomes_project 7 133181425 133190696 + MGP_129S1SvImJ_P0087045 Sec23ip protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087046.1 MGP_129S1SvImJ_G0033087.1 mouse_genomes_project 7 133181810 133186920 + MGP_129S1SvImJ_P0087046 Sec23ip protein_coding protein_coding MGP_129S1SvImJ_T0015752.1 MGP_129S1SvImJ_G0013841.1 mouse_genomes_project 7 23270578 23271104 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015841.1 MGP_129S1SvImJ_G0013930.1 mouse_genomes_project 7 74231941 74232929 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0087544.1 MGP_129S1SvImJ_G0033223.1 mouse_genomes_project 7 146479347 146511479 - MGP_129S1SvImJ_P0087544 Deaf1 protein_coding protein_coding MGP_129S1SvImJ_T0002308.1 MGP_129S1SvImJ_G0002219.1 mouse_genomes_project 7 83595948 83598165 - TEC TEC MGP_129S1SvImJ_T0008996.1 MGP_129S1SvImJ_G0007251.1 mouse_genomes_project 7 117978800 118079330 - 4933406I18Rik lincRNA lincRNA MGP_129S1SvImJ_T0008997.1 MGP_129S1SvImJ_G0007251.1 mouse_genomes_project 7 118025849 118078996 - 4933406I18Rik lincRNA lincRNA MGP_129S1SvImJ_T0084871.1 MGP_129S1SvImJ_G0032474.1 mouse_genomes_project 7 88624112 88625072 - MGP_129S1SvImJ_P0084871 Olfr305 protein_coding protein_coding MGP_129S1SvImJ_T0084108.1 MGP_129S1SvImJ_G0032311.1 mouse_genomes_project 7 56572824 56577154 + MGP_129S1SvImJ_P0084108 Siglech protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084109.1 MGP_129S1SvImJ_G0032311.1 mouse_genomes_project 7 56572830 56578107 + MGP_129S1SvImJ_P0084109 Siglech protein_coding protein_coding MGP_129S1SvImJ_T0084110.1 MGP_129S1SvImJ_G0032311.1 mouse_genomes_project 7 56572830 56578107 + MGP_129S1SvImJ_P0084110 Siglech protein_coding protein_coding MGP_129S1SvImJ_T0084111.1 MGP_129S1SvImJ_G0032311.1 mouse_genomes_project 7 56572872 56584403 + MGP_129S1SvImJ_P0084111 Siglech protein_coding protein_coding MGP_129S1SvImJ_T0084112.1 MGP_129S1SvImJ_G0032311.1 mouse_genomes_project 7 56572872 56584204 + MGP_129S1SvImJ_P0084112 Siglech protein_coding protein_coding MGP_129S1SvImJ_T0084113.1 MGP_129S1SvImJ_G0032311.1 mouse_genomes_project 7 56572882 56583188 + MGP_129S1SvImJ_P0084113 Siglech protein_coding protein_coding MGP_129S1SvImJ_T0084114.1 MGP_129S1SvImJ_G0032311.1 mouse_genomes_project 7 56572882 56583142 + MGP_129S1SvImJ_P0084114 Siglech protein_coding protein_coding MGP_129S1SvImJ_T0084115.1 MGP_129S1SvImJ_G0032311.1 mouse_genomes_project 7 56572907 56584495 + MGP_129S1SvImJ_P0084115 Siglech protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082450.1 MGP_129S1SvImJ_G0031901.1 mouse_genomes_project 7 25804580 25808265 - Snrpa protein_coding retained_intron MGP_129S1SvImJ_T0082451.1 MGP_129S1SvImJ_G0031901.1 mouse_genomes_project 7 25804582 25815011 - MGP_129S1SvImJ_P0082451 Snrpa protein_coding protein_coding MGP_129S1SvImJ_T0082452.1 MGP_129S1SvImJ_G0031901.1 mouse_genomes_project 7 25804582 25815496 - MGP_129S1SvImJ_P0082452 Snrpa protein_coding protein_coding MGP_129S1SvImJ_T0082453.1 MGP_129S1SvImJ_G0031901.1 mouse_genomes_project 7 25804582 25815522 - MGP_129S1SvImJ_P0082453 Snrpa protein_coding protein_coding MGP_129S1SvImJ_T0082454.1 MGP_129S1SvImJ_G0031901.1 mouse_genomes_project 7 25806581 25815011 - MGP_129S1SvImJ_P0082454 Snrpa protein_coding protein_coding MGP_129S1SvImJ_T0082455.1 MGP_129S1SvImJ_G0031901.1 mouse_genomes_project 7 25810964 25815275 - MGP_129S1SvImJ_P0082455 Snrpa protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082456.1 MGP_129S1SvImJ_G0031901.1 mouse_genomes_project 7 25813714 25815404 - Snrpa protein_coding retained_intron MGP_129S1SvImJ_T0083720.1 MGP_129S1SvImJ_G0032200.1 mouse_genomes_project 7 45357747 45359749 - MGP_129S1SvImJ_P0083720 Rps11 protein_coding protein_coding MGP_129S1SvImJ_T0085584.1 MGP_129S1SvImJ_G0032723.1 mouse_genomes_project 7 107748830 107749821 + MGP_129S1SvImJ_P0085584 Olfr656 protein_coding protein_coding MGP_129S1SvImJ_T0009048.1 MGP_129S1SvImJ_G0007283.1 mouse_genomes_project 7 134142354 134224293 + Gm44868 lincRNA lincRNA MGP_129S1SvImJ_T0009049.1 MGP_129S1SvImJ_G0007283.1 mouse_genomes_project 7 134142441 134146101 + Gm44868 lincRNA lincRNA MGP_129S1SvImJ_T0002234.1 MGP_129S1SvImJ_G0002146.1 mouse_genomes_project 7 36201766 36204149 + TEC TEC MGP_129S1SvImJ_T0084778.1 MGP_129S1SvImJ_G0032437.1 mouse_genomes_project 7 83879525 83919999 - MGP_129S1SvImJ_P0084778 Btbd1 protein_coding protein_coding MGP_129S1SvImJ_T0002272.1 MGP_129S1SvImJ_G0002184.1 mouse_genomes_project 7 74132746 74133246 + TEC TEC MGP_129S1SvImJ_T0018362.1 MGP_129S1SvImJ_G0015655.1 mouse_genomes_project 7 3744104 3754722 - Gm44015 processed_transcript lincRNA MGP_129S1SvImJ_T0018363.1 MGP_129S1SvImJ_G0015655.1 mouse_genomes_project 7 3744142 3750724 - Gm44015 processed_transcript retained_intron MGP_129S1SvImJ_T0086155.1 MGP_129S1SvImJ_G0032915.1 mouse_genomes_project 7 123608977 123640373 + MGP_129S1SvImJ_P0086155 Acsm4 protein_coding protein_coding MGP_129S1SvImJ_T0086156.1 MGP_129S1SvImJ_G0032915.1 mouse_genomes_project 7 123612291 123640150 + MGP_129S1SvImJ_P0086156 Acsm4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0086865.1 MGP_129S1SvImJ_G0033053.1 mouse_genomes_project 7 132149562 132173050 + MGP_129S1SvImJ_P0086865 Setd1a protein_coding protein_coding MGP_129S1SvImJ_T0086866.1 MGP_129S1SvImJ_G0033053.1 mouse_genomes_project 7 132150041 132156997 + MGP_129S1SvImJ_P0086866 Setd1a protein_coding protein_coding MGP_129S1SvImJ_T0086867.1 MGP_129S1SvImJ_G0033053.1 mouse_genomes_project 7 132150281 132156624 + MGP_129S1SvImJ_P0086867 Setd1a protein_coding protein_coding MGP_129S1SvImJ_T0086868.1 MGP_129S1SvImJ_G0033053.1 mouse_genomes_project 7 132150281 132173043 + MGP_129S1SvImJ_P0086868 Setd1a protein_coding protein_coding MGP_129S1SvImJ_T0086869.1 MGP_129S1SvImJ_G0033053.1 mouse_genomes_project 7 132150587 132151458 + MGP_129S1SvImJ_P0086869 Setd1a protein_coding protein_coding MGP_129S1SvImJ_T0086870.1 MGP_129S1SvImJ_G0033053.1 mouse_genomes_project 7 132151469 132154796 + Setd1a protein_coding processed_transcript MGP_129S1SvImJ_T0081662.1 MGP_129S1SvImJ_G0031671.1 mouse_genomes_project 7 10671255 10707689 + Lig1 protein_coding processed_transcript MGP_129S1SvImJ_T0081663.1 MGP_129S1SvImJ_G0031671.1 mouse_genomes_project 7 10671285 10707689 + MGP_129S1SvImJ_P0081663 Lig1 protein_coding protein_coding MGP_129S1SvImJ_T0081664.1 MGP_129S1SvImJ_G0031671.1 mouse_genomes_project 7 10672797 10707689 + MGP_129S1SvImJ_P0081664 Lig1 protein_coding protein_coding MGP_129S1SvImJ_T0081665.1 MGP_129S1SvImJ_G0031671.1 mouse_genomes_project 7 10672806 10687859 + MGP_129S1SvImJ_P0081665 Lig1 protein_coding protein_coding MGP_129S1SvImJ_T0081666.1 MGP_129S1SvImJ_G0031671.1 mouse_genomes_project 7 10672826 10688838 + MGP_129S1SvImJ_P0081666 Lig1 protein_coding protein_coding MGP_129S1SvImJ_T0081667.1 MGP_129S1SvImJ_G0031671.1 mouse_genomes_project 7 10672836 10707690 + Lig1 protein_coding processed_transcript MGP_129S1SvImJ_T0081668.1 MGP_129S1SvImJ_G0031671.1 mouse_genomes_project 7 10673236 10707697 + Lig1 protein_coding processed_transcript MGP_129S1SvImJ_T0081669.1 MGP_129S1SvImJ_G0031671.1 mouse_genomes_project 7 10673236 10707689 + MGP_129S1SvImJ_P0081669 Lig1 protein_coding protein_coding MGP_129S1SvImJ_T0081670.1 MGP_129S1SvImJ_G0031671.1 mouse_genomes_project 7 10676484 10707697 + Lig1 protein_coding processed_transcript MGP_129S1SvImJ_T0081671.1 MGP_129S1SvImJ_G0031671.1 mouse_genomes_project 7 10676484 10687586 + MGP_129S1SvImJ_P0081671 Lig1 protein_coding protein_coding MGP_129S1SvImJ_T0081672.1 MGP_129S1SvImJ_G0031671.1 mouse_genomes_project 7 10699147 10702333 + Lig1 protein_coding retained_intron MGP_129S1SvImJ_T0081673.1 MGP_129S1SvImJ_G0031671.1 mouse_genomes_project 7 10703507 10707629 + Lig1 protein_coding retained_intron MGP_129S1SvImJ_T0018463.1 MGP_129S1SvImJ_G0015698.1 mouse_genomes_project 7 145025880 145039124 + Gm16201 processed_transcript processed_transcript MGP_129S1SvImJ_T0018464.1 MGP_129S1SvImJ_G0015698.1 mouse_genomes_project 7 145025924 145054684 + Gm16201 processed_transcript processed_transcript MGP_129S1SvImJ_T0086767.1 MGP_129S1SvImJ_G0033037.1 mouse_genomes_project 7 131767213 131770274 - Zfp688 protein_coding retained_intron MGP_129S1SvImJ_T0086768.1 MGP_129S1SvImJ_G0033037.1 mouse_genomes_project 7 131767213 131770286 - MGP_129S1SvImJ_P0086768 Zfp688 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086769.1 MGP_129S1SvImJ_G0033037.1 mouse_genomes_project 7 131767213 131770281 - MGP_129S1SvImJ_P0086769 Zfp688 protein_coding protein_coding MGP_129S1SvImJ_T0086770.1 MGP_129S1SvImJ_G0033037.1 mouse_genomes_project 7 131767215 131770315 - Zfp688 protein_coding retained_intron MGP_129S1SvImJ_T0086771.1 MGP_129S1SvImJ_G0033037.1 mouse_genomes_project 7 131767592 131770097 - MGP_129S1SvImJ_P0086771 Zfp688 protein_coding protein_coding MGP_129S1SvImJ_T0086772.1 MGP_129S1SvImJ_G0033037.1 mouse_genomes_project 7 131767837 131770214 - MGP_129S1SvImJ_P0086772 Zfp688 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0005234.1 MGP_129S1SvImJ_G0004454.1 mouse_genomes_project 7 45930404 45932429 - antisense antisense MGP_129S1SvImJ_T0005235.1 MGP_129S1SvImJ_G0004454.1 mouse_genomes_project 7 45932287 45932697 - antisense antisense MGP_129S1SvImJ_T0082591.1 MGP_129S1SvImJ_G0031936.1 mouse_genomes_project 7 27062288 27070857 - MGP_129S1SvImJ_P0082591 protein_coding protein_coding MGP_129S1SvImJ_T0082592.1 MGP_129S1SvImJ_G0031936.1 mouse_genomes_project 7 27062288 27070909 - MGP_129S1SvImJ_P0082592 protein_coding protein_coding MGP_129S1SvImJ_T0082593.1 MGP_129S1SvImJ_G0031936.1 mouse_genomes_project 7 27066768 27067891 - MGP_129S1SvImJ_P0082593 protein_coding protein_coding MGP_129S1SvImJ_T0083769.1 MGP_129S1SvImJ_G0032214.1 mouse_genomes_project 7 45581212 45584903 + MGP_129S1SvImJ_P0083769 Hrc protein_coding protein_coding MGP_129S1SvImJ_T0002302.1 MGP_129S1SvImJ_G0002213.1 mouse_genomes_project 7 81741756 81743703 - TEC TEC MGP_129S1SvImJ_T0082882.1 MGP_129S1SvImJ_G0032010.1 mouse_genomes_project 7 29265322 29275634 + MGP_129S1SvImJ_P0082882 protein_coding protein_coding MGP_129S1SvImJ_T0005208.1 MGP_129S1SvImJ_G0004435.1 mouse_genomes_project 7 29903752 29904353 + Gm29439 antisense antisense MGP_129S1SvImJ_T0085785.1 MGP_129S1SvImJ_G0032828.1 mouse_genomes_project 7 112095969 112097025 + MGP_129S1SvImJ_P0085785 Olfr512 protein_coding protein_coding MGP_129S1SvImJ_T0081568.1 MGP_129S1SvImJ_G0031635.1 mouse_genomes_project 7 9209170 9210085 + MGP_129S1SvImJ_P0081568 Vmn1r74 protein_coding protein_coding MGP_129S1SvImJ_T0102699.1 MGP_129S1SvImJ_G0040532.1 mouse_genomes_project 7 11686973 11698565 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0086207.1 MGP_129S1SvImJ_G0032930.1 mouse_genomes_project 7 124617536 124642210 + MGP_129S1SvImJ_P0086207 Uqcrc2 protein_coding protein_coding MGP_129S1SvImJ_T0086208.1 MGP_129S1SvImJ_G0032930.1 mouse_genomes_project 7 124617600 124625578 + Uqcrc2 protein_coding processed_transcript MGP_129S1SvImJ_T0086209.1 MGP_129S1SvImJ_G0032930.1 mouse_genomes_project 7 124617875 124627603 + Uqcrc2 protein_coding processed_transcript MGP_129S1SvImJ_T0086210.1 MGP_129S1SvImJ_G0032930.1 mouse_genomes_project 7 124620022 124641893 + Uqcrc2 protein_coding processed_transcript MGP_129S1SvImJ_T0086211.1 MGP_129S1SvImJ_G0032930.1 mouse_genomes_project 7 124627278 124633291 + Uqcrc2 protein_coding retained_intron MGP_129S1SvImJ_T0086212.1 MGP_129S1SvImJ_G0032930.1 mouse_genomes_project 7 124633640 124640220 + Uqcrc2 protein_coding retained_intron MGP_129S1SvImJ_T0002230.1 MGP_129S1SvImJ_G0002142.1 mouse_genomes_project 7 34661217 34661972 + TEC TEC MGP_129S1SvImJ_T0015838.1 MGP_129S1SvImJ_G0013927.1 mouse_genomes_project 7 70569650 70570653 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0087925.1 MGP_129S1SvImJ_G0033296.1 mouse_genomes_project 7 150661246 150693663 - MGP_129S1SvImJ_P0087925 Tpcn2 protein_coding protein_coding MGP_129S1SvImJ_T0002233.1 MGP_129S1SvImJ_G0002145.1 mouse_genomes_project 7 36196420 36200405 + TEC TEC MGP_129S1SvImJ_T0008908.1 MGP_129S1SvImJ_G0007192.1 mouse_genomes_project 7 71665841 71666645 - Gm29327 lincRNA lincRNA MGP_129S1SvImJ_T0084878.1 MGP_129S1SvImJ_G0032481.1 mouse_genomes_project 7 88854337 88857385 + MGP_129S1SvImJ_P0084878 Olfr295 protein_coding protein_coding MGP_129S1SvImJ_T0084879.1 MGP_129S1SvImJ_G0032481.1 mouse_genomes_project 7 88856455 88857385 + MGP_129S1SvImJ_P0084879 Olfr295 protein_coding protein_coding MGP_129S1SvImJ_T0098633.1 MGP_129S1SvImJ_G0036718.1 mouse_genomes_project 7 28583323 28583439 - n-R5s153 rRNA rRNA MGP_129S1SvImJ_T0085327.1 MGP_129S1SvImJ_G0032589.1 mouse_genomes_project 7 104851489 104856777 - MGP_129S1SvImJ_P0085327 Folr2 protein_coding protein_coding MGP_129S1SvImJ_T0099001.1 MGP_129S1SvImJ_G0037075.1 mouse_genomes_project 7 91753085 91784730 - sense_intronic sense_intronic MGP_129S1SvImJ_T0085035.1 MGP_129S1SvImJ_G0032527.1 mouse_genomes_project 7 100255399 100281867 - MGP_129S1SvImJ_P0085035 Aamdc protein_coding protein_coding MGP_129S1SvImJ_T0085036.1 MGP_129S1SvImJ_G0032527.1 mouse_genomes_project 7 100255402 100285696 - MGP_129S1SvImJ_P0085036 Aamdc protein_coding protein_coding MGP_129S1SvImJ_T0085037.1 MGP_129S1SvImJ_G0032527.1 mouse_genomes_project 7 100255407 100285707 - MGP_129S1SvImJ_P0085037 Aamdc protein_coding protein_coding MGP_129S1SvImJ_T0085038.1 MGP_129S1SvImJ_G0032527.1 mouse_genomes_project 7 100255408 100285615 - MGP_129S1SvImJ_P0085038 Aamdc protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085039.1 MGP_129S1SvImJ_G0032527.1 mouse_genomes_project 7 100255415 100285703 - Aamdc protein_coding processed_transcript MGP_129S1SvImJ_T0085040.1 MGP_129S1SvImJ_G0032527.1 mouse_genomes_project 7 100255610 100285658 - MGP_129S1SvImJ_P0085040 Aamdc protein_coding protein_coding MGP_129S1SvImJ_T0085041.1 MGP_129S1SvImJ_G0032527.1 mouse_genomes_project 7 100255616 100285659 - MGP_129S1SvImJ_P0085041 Aamdc protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085042.1 MGP_129S1SvImJ_G0032527.1 mouse_genomes_project 7 100255633 100285691 - MGP_129S1SvImJ_P0085042 Aamdc protein_coding protein_coding MGP_129S1SvImJ_T0085043.1 MGP_129S1SvImJ_G0032527.1 mouse_genomes_project 7 100255738 100285636 - MGP_129S1SvImJ_P0085043 Aamdc protein_coding protein_coding MGP_129S1SvImJ_T0085044.1 MGP_129S1SvImJ_G0032527.1 mouse_genomes_project 7 100255783 100285599 - MGP_129S1SvImJ_P0085044 Aamdc protein_coding protein_coding MGP_129S1SvImJ_T0085045.1 MGP_129S1SvImJ_G0032527.1 mouse_genomes_project 7 100282113 100284444 - Aamdc protein_coding retained_intron MGP_129S1SvImJ_T0015789.1 MGP_129S1SvImJ_G0013878.1 mouse_genomes_project 7 41173356 41173558 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0086644.1 MGP_129S1SvImJ_G0033007.1 mouse_genomes_project 7 131192464 131198036 - MGP_129S1SvImJ_P0086644 Tmem219 protein_coding protein_coding MGP_129S1SvImJ_T0086645.1 MGP_129S1SvImJ_G0033007.1 mouse_genomes_project 7 131192511 131203704 - MGP_129S1SvImJ_P0086645 Tmem219 protein_coding protein_coding MGP_129S1SvImJ_T0086646.1 MGP_129S1SvImJ_G0033007.1 mouse_genomes_project 7 131192513 131195585 - Tmem219 protein_coding retained_intron MGP_129S1SvImJ_T0086647.1 MGP_129S1SvImJ_G0033007.1 mouse_genomes_project 7 131192513 131230820 - MGP_129S1SvImJ_P0086647 Tmem219 protein_coding protein_coding MGP_129S1SvImJ_T0086648.1 MGP_129S1SvImJ_G0033007.1 mouse_genomes_project 7 131192513 131204533 - MGP_129S1SvImJ_P0086648 Tmem219 protein_coding protein_coding MGP_129S1SvImJ_T0086649.1 MGP_129S1SvImJ_G0033007.1 mouse_genomes_project 7 131192513 131204556 - MGP_129S1SvImJ_P0086649 Tmem219 protein_coding protein_coding MGP_129S1SvImJ_T0086650.1 MGP_129S1SvImJ_G0033007.1 mouse_genomes_project 7 131192515 131203156 - MGP_129S1SvImJ_P0086650 Tmem219 protein_coding protein_coding MGP_129S1SvImJ_T0086651.1 MGP_129S1SvImJ_G0033007.1 mouse_genomes_project 7 131195304 131230822 - MGP_129S1SvImJ_P0086651 Tmem219 protein_coding protein_coding MGP_129S1SvImJ_T0086652.1 MGP_129S1SvImJ_G0033007.1 mouse_genomes_project 7 131197260 131204561 - Tmem219 protein_coding retained_intron MGP_129S1SvImJ_T0086653.1 MGP_129S1SvImJ_G0033007.1 mouse_genomes_project 7 131197882 131230805 - MGP_129S1SvImJ_P0086653 Tmem219 protein_coding protein_coding MGP_129S1SvImJ_T0102826.1 MGP_129S1SvImJ_G0040658.1 mouse_genomes_project 7 109397114 109398380 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0083206.1 MGP_129S1SvImJ_G0032073.1 mouse_genomes_project 7 33441776 33454381 - MGP_129S1SvImJ_P0083206 Pdcd2l protein_coding protein_coding MGP_129S1SvImJ_T0083207.1 MGP_129S1SvImJ_G0032073.1 mouse_genomes_project 7 33441910 33454328 - MGP_129S1SvImJ_P0083207 Pdcd2l protein_coding protein_coding MGP_129S1SvImJ_T0083208.1 MGP_129S1SvImJ_G0032073.1 mouse_genomes_project 7 33446737 33449478 - Pdcd2l protein_coding retained_intron MGP_129S1SvImJ_T0083209.1 MGP_129S1SvImJ_G0032073.1 mouse_genomes_project 7 33449539 33453866 - Pdcd2l protein_coding processed_transcript MGP_129S1SvImJ_T0008930.1 MGP_129S1SvImJ_G0007212.1 mouse_genomes_project 7 75365359 75401480 - Gm10619 lincRNA lincRNA MGP_129S1SvImJ_T0008931.1 MGP_129S1SvImJ_G0007212.1 mouse_genomes_project 7 75393270 75401552 - Gm10619 lincRNA lincRNA MGP_129S1SvImJ_T0085811.1 MGP_129S1SvImJ_G0032841.1 mouse_genomes_project 7 112869842 112917058 - MGP_129S1SvImJ_P0085811 Trim66 protein_coding protein_coding MGP_129S1SvImJ_T0085812.1 MGP_129S1SvImJ_G0032841.1 mouse_genomes_project 7 112874327 112936526 - MGP_129S1SvImJ_P0085812 Trim66 protein_coding protein_coding MGP_129S1SvImJ_T0085813.1 MGP_129S1SvImJ_G0032841.1 mouse_genomes_project 7 112874327 112936526 - MGP_129S1SvImJ_P0085813 Trim66 protein_coding protein_coding MGP_129S1SvImJ_T0085814.1 MGP_129S1SvImJ_G0032841.1 mouse_genomes_project 7 112890563 112896888 - Trim66 protein_coding processed_transcript MGP_129S1SvImJ_T0087423.1 MGP_129S1SvImJ_G0033193.1 mouse_genomes_project 7 145980397 145981620 + MGP_129S1SvImJ_P0087423 Scgb1c1 protein_coding protein_coding MGP_129S1SvImJ_T0085253.1 MGP_129S1SvImJ_G0032577.1 mouse_genomes_project 7 103766639 103783497 - MGP_129S1SvImJ_P0085253 Relt protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085254.1 MGP_129S1SvImJ_G0032577.1 mouse_genomes_project 7 103767339 103773224 - MGP_129S1SvImJ_P0085254 Relt protein_coding protein_coding MGP_129S1SvImJ_T0085255.1 MGP_129S1SvImJ_G0032577.1 mouse_genomes_project 7 103771220 103775538 - MGP_129S1SvImJ_P0085255 Relt protein_coding protein_coding MGP_129S1SvImJ_T0085256.1 MGP_129S1SvImJ_G0032577.1 mouse_genomes_project 7 103771220 103776411 - MGP_129S1SvImJ_P0085256 Relt protein_coding protein_coding MGP_129S1SvImJ_T0085257.1 MGP_129S1SvImJ_G0032577.1 mouse_genomes_project 7 103771230 103783249 - MGP_129S1SvImJ_P0085257 Relt protein_coding protein_coding MGP_129S1SvImJ_T0085258.1 MGP_129S1SvImJ_G0032577.1 mouse_genomes_project 7 103773165 103783489 - MGP_129S1SvImJ_P0085258 Relt protein_coding protein_coding MGP_129S1SvImJ_T0102814.1 MGP_129S1SvImJ_G0040646.1 mouse_genomes_project 7 107431446 107432442 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102790.1 MGP_129S1SvImJ_G0040622.1 mouse_genomes_project 7 88358763 88359660 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102744.1 MGP_129S1SvImJ_G0040576.1 mouse_genomes_project 7 44032822 44034859 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0085522.1 MGP_129S1SvImJ_G0032689.1 mouse_genomes_project 7 107129442 107130390 + MGP_129S1SvImJ_P0085522 protein_coding protein_coding MGP_129S1SvImJ_T0082603.1 MGP_129S1SvImJ_G0031939.1 mouse_genomes_project 7 27096799 27120404 - MGP_129S1SvImJ_P0082603 Supt5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0082604.1 MGP_129S1SvImJ_G0031939.1 mouse_genomes_project 7 27096808 27120366 - MGP_129S1SvImJ_P0082604 Supt5 protein_coding protein_coding MGP_129S1SvImJ_T0008922.1 MGP_129S1SvImJ_G0007206.1 mouse_genomes_project 7 74721420 74724691 + Gm44670 lincRNA lincRNA MGP_129S1SvImJ_T0008923.1 MGP_129S1SvImJ_G0007206.1 mouse_genomes_project 7 74721479 74725126 + Gm44670 lincRNA lincRNA MGP_129S1SvImJ_T0083463.1 MGP_129S1SvImJ_G0032129.1 mouse_genomes_project 7 43506626 43522350 - MGP_129S1SvImJ_P0083463 4931406B18Rik protein_coding protein_coding MGP_129S1SvImJ_T0083464.1 MGP_129S1SvImJ_G0032129.1 mouse_genomes_project 7 43510220 43522044 - MGP_129S1SvImJ_P0083464 4931406B18Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083465.1 MGP_129S1SvImJ_G0032129.1 mouse_genomes_project 7 43510966 43522339 - MGP_129S1SvImJ_P0083465 4931406B18Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083466.1 MGP_129S1SvImJ_G0032129.1 mouse_genomes_project 7 43513078 43520634 - MGP_129S1SvImJ_P0083466 4931406B18Rik protein_coding protein_coding MGP_129S1SvImJ_T0083467.1 MGP_129S1SvImJ_G0032129.1 mouse_genomes_project 7 43514158 43522345 - 4931406B18Rik protein_coding retained_intron MGP_129S1SvImJ_T0083468.1 MGP_129S1SvImJ_G0032129.1 mouse_genomes_project 7 43514806 43522352 - MGP_129S1SvImJ_P0083468 4931406B18Rik protein_coding protein_coding MGP_129S1SvImJ_T0083469.1 MGP_129S1SvImJ_G0032129.1 mouse_genomes_project 7 43517650 43522106 - MGP_129S1SvImJ_P0083469 4931406B18Rik protein_coding protein_coding MGP_129S1SvImJ_T0082864.1 MGP_129S1SvImJ_G0032006.1 mouse_genomes_project 7 29203928 29213192 - MGP_129S1SvImJ_P0082864 Tbcb protein_coding protein_coding MGP_129S1SvImJ_T0082865.1 MGP_129S1SvImJ_G0032006.1 mouse_genomes_project 7 29203930 29206798 - Tbcb protein_coding processed_transcript MGP_129S1SvImJ_T0082866.1 MGP_129S1SvImJ_G0032006.1 mouse_genomes_project 7 29203934 29206859 - Tbcb protein_coding retained_intron MGP_129S1SvImJ_T0008899.1 MGP_129S1SvImJ_G0007188.1 mouse_genomes_project 7 69062120 69080475 - 4833412C05Rik lincRNA lincRNA MGP_129S1SvImJ_T0085501.1 MGP_129S1SvImJ_G0032670.1 mouse_genomes_project 7 106753632 106754589 + MGP_129S1SvImJ_P0085501 Olfr618 protein_coding protein_coding MGP_129S1SvImJ_T0087160.1 MGP_129S1SvImJ_G0033114.1 mouse_genomes_project 7 137311265 137331241 + Lhpp protein_coding processed_transcript MGP_129S1SvImJ_T0087161.1 MGP_129S1SvImJ_G0033114.1 mouse_genomes_project 7 137311266 137407257 + MGP_129S1SvImJ_P0087161 Lhpp protein_coding protein_coding MGP_129S1SvImJ_T0087162.1 MGP_129S1SvImJ_G0033114.1 mouse_genomes_project 7 137311294 137371454 + Lhpp protein_coding processed_transcript MGP_129S1SvImJ_T0087163.1 MGP_129S1SvImJ_G0033114.1 mouse_genomes_project 7 137311335 137406614 + Lhpp protein_coding processed_transcript MGP_129S1SvImJ_T0087164.1 MGP_129S1SvImJ_G0033114.1 mouse_genomes_project 7 137330985 137342180 + Lhpp protein_coding retained_intron MGP_129S1SvImJ_T0085543.1 MGP_129S1SvImJ_G0032708.1 mouse_genomes_project 7 107446638 107455360 + Trim6 protein_coding retained_intron MGP_129S1SvImJ_T0085544.1 MGP_129S1SvImJ_G0032708.1 mouse_genomes_project 7 107446640 107461629 + MGP_129S1SvImJ_P0085544 Trim6 protein_coding protein_coding MGP_129S1SvImJ_T0085545.1 MGP_129S1SvImJ_G0032708.1 mouse_genomes_project 7 107446682 107453736 + MGP_129S1SvImJ_P0085545 Trim6 protein_coding protein_coding MGP_129S1SvImJ_T0085546.1 MGP_129S1SvImJ_G0032708.1 mouse_genomes_project 7 107447274 107453773 + MGP_129S1SvImJ_P0085546 Trim6 protein_coding protein_coding MGP_129S1SvImJ_T0085547.1 MGP_129S1SvImJ_G0032708.1 mouse_genomes_project 7 107449007 107454657 + MGP_129S1SvImJ_P0085547 Trim6 protein_coding protein_coding MGP_129S1SvImJ_T0085548.1 MGP_129S1SvImJ_G0032708.1 mouse_genomes_project 7 107453346 107459514 + MGP_129S1SvImJ_P0085548 Trim6 protein_coding protein_coding MGP_129S1SvImJ_T0098379.1 MGP_129S1SvImJ_G0036464.1 mouse_genomes_project 7 72810435 72810999 - pseudogene pseudogene MGP_129S1SvImJ_T0087564.1 MGP_129S1SvImJ_G0033226.1 mouse_genomes_project 7 146578831 146590245 + MGP_129S1SvImJ_P0087564 Taldo1 protein_coding protein_coding MGP_129S1SvImJ_T0087565.1 MGP_129S1SvImJ_G0033226.1 mouse_genomes_project 7 146578875 146586400 + Taldo1 protein_coding retained_intron MGP_129S1SvImJ_T0087566.1 MGP_129S1SvImJ_G0033226.1 mouse_genomes_project 7 146587430 146589483 + Taldo1 protein_coding retained_intron MGP_129S1SvImJ_T0085439.1 MGP_129S1SvImJ_G0032613.1 mouse_genomes_project 7 105618637 105619588 + MGP_129S1SvImJ_P0085439 Olfr549 protein_coding protein_coding MGP_129S1SvImJ_T0010874.1 MGP_129S1SvImJ_G0008990.1 mouse_genomes_project 7 27982397 27982456 - Mir1963 miRNA miRNA MGP_129S1SvImJ_T0083988.1 MGP_129S1SvImJ_G0032270.1 mouse_genomes_project 7 47134117 47138776 - MGP_129S1SvImJ_P0083988 Saa2 protein_coding protein_coding MGP_129S1SvImJ_T0084388.1 MGP_129S1SvImJ_G0032367.1 mouse_genomes_project 7 73594375 73837809 - MGP_129S1SvImJ_P0084388 Mctp2 protein_coding protein_coding MGP_129S1SvImJ_T0084389.1 MGP_129S1SvImJ_G0032367.1 mouse_genomes_project 7 73596958 73627174 - MGP_129S1SvImJ_P0084389 Mctp2 protein_coding protein_coding MGP_129S1SvImJ_T0084390.1 MGP_129S1SvImJ_G0032367.1 mouse_genomes_project 7 73638303 73679477 - MGP_129S1SvImJ_P0084390 Mctp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084391.1 MGP_129S1SvImJ_G0032367.1 mouse_genomes_project 7 73747803 73751790 - Mctp2 protein_coding retained_intron MGP_129S1SvImJ_T0084392.1 MGP_129S1SvImJ_G0032367.1 mouse_genomes_project 7 73779576 73837809 - Mctp2 protein_coding retained_intron MGP_129S1SvImJ_T0008910.1 MGP_129S1SvImJ_G0007194.1 mouse_genomes_project 7 72690295 72697558 + 6030442E23Rik lincRNA lincRNA MGP_129S1SvImJ_T0081502.1 MGP_129S1SvImJ_G0031597.1 mouse_genomes_project 7 3288519 3308280 + MGP_129S1SvImJ_P0081502 Zscan5b protein_coding protein_coding MGP_129S1SvImJ_T0081503.1 MGP_129S1SvImJ_G0031597.1 mouse_genomes_project 7 3288536 3300545 + MGP_129S1SvImJ_P0081503 Zscan5b protein_coding protein_coding MGP_129S1SvImJ_T0081504.1 MGP_129S1SvImJ_G0031597.1 mouse_genomes_project 7 3299319 3308047 + MGP_129S1SvImJ_P0081504 Zscan5b protein_coding protein_coding MGP_129S1SvImJ_T0085782.1 MGP_129S1SvImJ_G0032825.1 mouse_genomes_project 7 112013084 112014017 + MGP_129S1SvImJ_P0085782 Olfr508 protein_coding protein_coding MGP_129S1SvImJ_T0085524.1 MGP_129S1SvImJ_G0032691.1 mouse_genomes_project 7 107158015 107158969 + MGP_129S1SvImJ_P0085524 Olfr632 protein_coding protein_coding MGP_129S1SvImJ_T0015755.1 MGP_129S1SvImJ_G0013844.1 mouse_genomes_project 7 23919355 23920667 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005255.1 MGP_129S1SvImJ_G0004469.1 mouse_genomes_project 7 81834098 81837803 + Gm26646 antisense antisense MGP_129S1SvImJ_T0005256.1 MGP_129S1SvImJ_G0004469.1 mouse_genomes_project 7 81836130 81837803 + Gm26646 antisense antisense MGP_129S1SvImJ_T0005320.1 MGP_129S1SvImJ_G0004514.1 mouse_genomes_project 7 133164723 133165852 + Gm44674 antisense antisense MGP_129S1SvImJ_T0087577.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146618387 146626536 - MGP_129S1SvImJ_P0087577 Slc25a22 protein_coding protein_coding MGP_129S1SvImJ_T0087578.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146618392 146626471 - Slc25a22 protein_coding retained_intron MGP_129S1SvImJ_T0087579.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146618392 146626275 - MGP_129S1SvImJ_P0087579 Slc25a22 protein_coding protein_coding MGP_129S1SvImJ_T0087580.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146618392 146623238 - MGP_129S1SvImJ_P0087580 Slc25a22 protein_coding protein_coding MGP_129S1SvImJ_T0087581.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146618392 146626281 - MGP_129S1SvImJ_P0087581 Slc25a22 protein_coding protein_coding MGP_129S1SvImJ_T0087582.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146618395 146623985 - Slc25a22 protein_coding retained_intron MGP_129S1SvImJ_T0087583.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146618395 146626282 - MGP_129S1SvImJ_P0087583 Slc25a22 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087584.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146618399 146621397 - MGP_129S1SvImJ_P0087584 Slc25a22 protein_coding protein_coding MGP_129S1SvImJ_T0087585.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146619597 146620682 - Slc25a22 protein_coding retained_intron MGP_129S1SvImJ_T0087586.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146619663 146620703 - Slc25a22 protein_coding retained_intron MGP_129S1SvImJ_T0087587.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146619829 146620242 - MGP_129S1SvImJ_P0087587 Slc25a22 protein_coding protein_coding MGP_129S1SvImJ_T0087588.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146620011 146621492 - Slc25a22 protein_coding retained_intron MGP_129S1SvImJ_T0087589.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146620219 146624041 - MGP_129S1SvImJ_P0087589 Slc25a22 protein_coding protein_coding MGP_129S1SvImJ_T0087590.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146620269 146623067 - MGP_129S1SvImJ_P0087590 Slc25a22 protein_coding protein_coding MGP_129S1SvImJ_T0087591.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146620282 146622959 - MGP_129S1SvImJ_P0087591 Slc25a22 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087592.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146620286 146622651 - MGP_129S1SvImJ_P0087592 Slc25a22 protein_coding protein_coding MGP_129S1SvImJ_T0087593.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146620536 146622614 - Slc25a22 protein_coding retained_intron MGP_129S1SvImJ_T0087594.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146620550 146626237 - MGP_129S1SvImJ_P0087594 Slc25a22 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087595.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146620688 146623967 - Slc25a22 protein_coding processed_transcript MGP_129S1SvImJ_T0087596.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146620754 146626236 - MGP_129S1SvImJ_P0087596 Slc25a22 protein_coding protein_coding MGP_129S1SvImJ_T0087597.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146621228 146623968 - Slc25a22 protein_coding retained_intron MGP_129S1SvImJ_T0087598.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146621344 146623244 - MGP_129S1SvImJ_P0087598 Slc25a22 protein_coding protein_coding MGP_129S1SvImJ_T0087599.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146622240 146623248 - MGP_129S1SvImJ_P0087599 Slc25a22 protein_coding protein_coding MGP_129S1SvImJ_T0087600.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146622573 146623187 - MGP_129S1SvImJ_P0087600 Slc25a22 protein_coding protein_coding MGP_129S1SvImJ_T0087601.1 MGP_129S1SvImJ_G0033229.1 mouse_genomes_project 7 146622605 146623238 - MGP_129S1SvImJ_P0087601 Slc25a22 protein_coding protein_coding MGP_129S1SvImJ_T0010914.1 MGP_129S1SvImJ_G0009030.1 mouse_genomes_project 7 63152075 63152163 - Gm24923 miRNA miRNA MGP_129S1SvImJ_T0015810.1 MGP_129S1SvImJ_G0013899.1 mouse_genomes_project 7 46139678 46141982 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015896.1 MGP_129S1SvImJ_G0013985.1 mouse_genomes_project 7 109780587 109781625 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0083065.1 MGP_129S1SvImJ_G0032049.1 mouse_genomes_project 7 29896604 29910002 - MGP_129S1SvImJ_P0083065 Cd22 protein_coding protein_coding MGP_129S1SvImJ_T0083066.1 MGP_129S1SvImJ_G0032049.1 mouse_genomes_project 7 29897029 29911007 - MGP_129S1SvImJ_P0083066 Cd22 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083067.1 MGP_129S1SvImJ_G0032049.1 mouse_genomes_project 7 29897029 29911243 - MGP_129S1SvImJ_P0083067 Cd22 protein_coding protein_coding MGP_129S1SvImJ_T0083068.1 MGP_129S1SvImJ_G0032049.1 mouse_genomes_project 7 29897029 29911038 - MGP_129S1SvImJ_P0083068 Cd22 protein_coding protein_coding MGP_129S1SvImJ_T0083069.1 MGP_129S1SvImJ_G0032049.1 mouse_genomes_project 7 29897031 29909453 - MGP_129S1SvImJ_P0083069 Cd22 protein_coding protein_coding MGP_129S1SvImJ_T0083070.1 MGP_129S1SvImJ_G0032049.1 mouse_genomes_project 7 29897465 29911308 - MGP_129S1SvImJ_P0083070 Cd22 protein_coding protein_coding MGP_129S1SvImJ_T0083071.1 MGP_129S1SvImJ_G0032049.1 mouse_genomes_project 7 29897491 29911253 - MGP_129S1SvImJ_P0083071 Cd22 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083072.1 MGP_129S1SvImJ_G0032049.1 mouse_genomes_project 7 29897733 29910299 - MGP_129S1SvImJ_P0083072 Cd22 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0083073.1 MGP_129S1SvImJ_G0032049.1 mouse_genomes_project 7 29901670 29904439 - MGP_129S1SvImJ_P0083073 Cd22 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083074.1 MGP_129S1SvImJ_G0032049.1 mouse_genomes_project 7 29907059 29910198 - Cd22 protein_coding processed_transcript MGP_129S1SvImJ_T0083075.1 MGP_129S1SvImJ_G0032049.1 mouse_genomes_project 7 29908434 29911235 - MGP_129S1SvImJ_P0083075 Cd22 protein_coding protein_coding MGP_129S1SvImJ_T0083076.1 MGP_129S1SvImJ_G0032049.1 mouse_genomes_project 7 29908574 29909098 - Cd22 protein_coding retained_intron MGP_129S1SvImJ_T0083077.1 MGP_129S1SvImJ_G0032049.1 mouse_genomes_project 7 29908614 29911252 - Cd22 protein_coding processed_transcript MGP_129S1SvImJ_T0083078.1 MGP_129S1SvImJ_G0032049.1 mouse_genomes_project 7 29908653 29911252 - Cd22 protein_coding processed_transcript MGP_129S1SvImJ_T0083079.1 MGP_129S1SvImJ_G0032049.1 mouse_genomes_project 7 29908729 29911242 - MGP_129S1SvImJ_P0083079 Cd22 protein_coding protein_coding MGP_129S1SvImJ_T0083080.1 MGP_129S1SvImJ_G0032049.1 mouse_genomes_project 7 29910166 29911316 - Cd22 protein_coding processed_transcript MGP_129S1SvImJ_T0015894.1 MGP_129S1SvImJ_G0013983.1 mouse_genomes_project 7 107569353 107570483 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002347.1 MGP_129S1SvImJ_G0002258.1 mouse_genomes_project 7 150139178 150140522 + TEC TEC MGP_129S1SvImJ_T0008919.1 MGP_129S1SvImJ_G0007203.1 mouse_genomes_project 7 74633999 74638318 - Gm6567 lincRNA lincRNA MGP_129S1SvImJ_T0101320.1 MGP_129S1SvImJ_G0039387.1 mouse_genomes_project 7 60147334 60147403 - snoRNA snoRNA MGP_129S1SvImJ_T0083339.1 MGP_129S1SvImJ_G0032096.1 mouse_genomes_project 7 35178691 35210358 - MGP_129S1SvImJ_P0083339 Zfp507 protein_coding protein_coding MGP_129S1SvImJ_T0083340.1 MGP_129S1SvImJ_G0032096.1 mouse_genomes_project 7 35180075 35201413 - MGP_129S1SvImJ_P0083340 Zfp507 protein_coding protein_coding MGP_129S1SvImJ_T0083341.1 MGP_129S1SvImJ_G0032096.1 mouse_genomes_project 7 35182322 35210336 - MGP_129S1SvImJ_P0083341 Zfp507 protein_coding protein_coding MGP_129S1SvImJ_T0083342.1 MGP_129S1SvImJ_G0032096.1 mouse_genomes_project 7 35186294 35186578 - Zfp507 protein_coding processed_transcript MGP_129S1SvImJ_T0083343.1 MGP_129S1SvImJ_G0032096.1 mouse_genomes_project 7 35199133 35210355 - MGP_129S1SvImJ_P0083343 Zfp507 protein_coding protein_coding MGP_129S1SvImJ_T0083344.1 MGP_129S1SvImJ_G0032096.1 mouse_genomes_project 7 35208378 35210323 - Zfp507 protein_coding retained_intron MGP_129S1SvImJ_T0083345.1 MGP_129S1SvImJ_G0032096.1 mouse_genomes_project 7 35209385 35210372 - Zfp507 protein_coding retained_intron MGP_129S1SvImJ_T0083098.1 MGP_129S1SvImJ_G0032053.1 mouse_genomes_project 7 29994785 29996031 - MGP_129S1SvImJ_P0083098 protein_coding protein_coding MGP_129S1SvImJ_T0002270.1 MGP_129S1SvImJ_G0002182.1 mouse_genomes_project 7 65676193 65676665 + TEC TEC MGP_129S1SvImJ_T0082392.1 MGP_129S1SvImJ_G0031880.1 mouse_genomes_project 7 24319776 24334265 - MGP_129S1SvImJ_P0082392 Cyp2s1 protein_coding protein_coding MGP_129S1SvImJ_T0082393.1 MGP_129S1SvImJ_G0031880.1 mouse_genomes_project 7 24319776 24334005 - MGP_129S1SvImJ_P0082393 Cyp2s1 protein_coding protein_coding MGP_129S1SvImJ_T0082394.1 MGP_129S1SvImJ_G0031880.1 mouse_genomes_project 7 24321449 24333910 - Cyp2s1 protein_coding retained_intron MGP_129S1SvImJ_T0082395.1 MGP_129S1SvImJ_G0031880.1 mouse_genomes_project 7 24326645 24332756 - MGP_129S1SvImJ_P0082395 Cyp2s1 protein_coding protein_coding MGP_129S1SvImJ_T0010855.1 MGP_129S1SvImJ_G0008971.1 mouse_genomes_project 7 8241647 8241723 - Gm23087 miRNA miRNA MGP_129S1SvImJ_T0002246.1 MGP_129S1SvImJ_G0002158.1 mouse_genomes_project 7 43752592 43753026 + TEC TEC MGP_129S1SvImJ_T0098640.1 MGP_129S1SvImJ_G0036725.1 mouse_genomes_project 7 116739820 116739931 + Gm23662 rRNA rRNA MGP_129S1SvImJ_T0008893.1 MGP_129S1SvImJ_G0007183.1 mouse_genomes_project 7 66765163 66820436 - lincRNA lincRNA MGP_129S1SvImJ_T0087047.1 MGP_129S1SvImJ_G0033088.1 mouse_genomes_project 7 133718989 133861829 + MGP_129S1SvImJ_P0087047 Plpp4 protein_coding protein_coding MGP_129S1SvImJ_T0087048.1 MGP_129S1SvImJ_G0033088.1 mouse_genomes_project 7 133718996 133788279 + Plpp4 protein_coding retained_intron MGP_129S1SvImJ_T0087049.1 MGP_129S1SvImJ_G0033088.1 mouse_genomes_project 7 133719005 133772327 + Plpp4 protein_coding processed_transcript MGP_129S1SvImJ_T0087050.1 MGP_129S1SvImJ_G0033088.1 mouse_genomes_project 7 133719007 133861724 + MGP_129S1SvImJ_P0087050 Plpp4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087051.1 MGP_129S1SvImJ_G0033088.1 mouse_genomes_project 7 133719013 133861436 + MGP_129S1SvImJ_P0087051 Plpp4 protein_coding protein_coding MGP_129S1SvImJ_T0081682.1 MGP_129S1SvImJ_G0031675.1 mouse_genomes_project 7 10923358 10941681 - MGP_129S1SvImJ_P0081682 Bsph2 protein_coding protein_coding MGP_129S1SvImJ_T0081683.1 MGP_129S1SvImJ_G0031675.1 mouse_genomes_project 7 10923360 10941681 - MGP_129S1SvImJ_P0081683 Bsph2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0015792.1 MGP_129S1SvImJ_G0013881.1 mouse_genomes_project 7 41451499 41452199 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005194.1 MGP_129S1SvImJ_G0004423.1 mouse_genomes_project 7 25735401 25741611 - Gm15883 antisense antisense MGP_129S1SvImJ_T0082883.1 MGP_129S1SvImJ_G0032011.1 mouse_genomes_project 7 29277068 29292905 + MGP_129S1SvImJ_P0082883 Clip3 protein_coding protein_coding MGP_129S1SvImJ_T0082884.1 MGP_129S1SvImJ_G0032011.1 mouse_genomes_project 7 29277124 29278070 + Clip3 protein_coding retained_intron MGP_129S1SvImJ_T0082885.1 MGP_129S1SvImJ_G0032011.1 mouse_genomes_project 7 29277125 29282461 + MGP_129S1SvImJ_P0082885 Clip3 protein_coding protein_coding MGP_129S1SvImJ_T0082886.1 MGP_129S1SvImJ_G0032011.1 mouse_genomes_project 7 29277135 29282217 + MGP_129S1SvImJ_P0082886 Clip3 protein_coding protein_coding MGP_129S1SvImJ_T0082887.1 MGP_129S1SvImJ_G0032011.1 mouse_genomes_project 7 29277354 29282228 + MGP_129S1SvImJ_P0082887 Clip3 protein_coding protein_coding MGP_129S1SvImJ_T0082888.1 MGP_129S1SvImJ_G0032011.1 mouse_genomes_project 7 29282410 29284483 + Clip3 protein_coding processed_transcript MGP_129S1SvImJ_T0082889.1 MGP_129S1SvImJ_G0032011.1 mouse_genomes_project 7 29289230 29291841 + Clip3 protein_coding processed_transcript MGP_129S1SvImJ_T0081617.1 MGP_129S1SvImJ_G0031659.1 mouse_genomes_project 7 10375968 10381528 + MGP_129S1SvImJ_P0081617 Zfp446 protein_coding protein_coding MGP_129S1SvImJ_T0081618.1 MGP_129S1SvImJ_G0031659.1 mouse_genomes_project 7 10375968 10382441 + MGP_129S1SvImJ_P0081618 Zfp446 protein_coding protein_coding MGP_129S1SvImJ_T0081619.1 MGP_129S1SvImJ_G0031659.1 mouse_genomes_project 7 10375968 10381528 + MGP_129S1SvImJ_P0081619 Zfp446 protein_coding protein_coding MGP_129S1SvImJ_T0081620.1 MGP_129S1SvImJ_G0031659.1 mouse_genomes_project 7 10376013 10379595 + Zfp446 protein_coding retained_intron MGP_129S1SvImJ_T0081621.1 MGP_129S1SvImJ_G0031659.1 mouse_genomes_project 7 10376360 10382447 + MGP_129S1SvImJ_P0081621 Zfp446 protein_coding protein_coding MGP_129S1SvImJ_T0081622.1 MGP_129S1SvImJ_G0031659.1 mouse_genomes_project 7 10377642 10382472 + Zfp446 protein_coding retained_intron MGP_129S1SvImJ_T0081460.1 MGP_129S1SvImJ_G0031574.1 mouse_genomes_project 7 1963205 1970496 - MGP_129S1SvImJ_P0081460 Fiz1 protein_coding protein_coding MGP_129S1SvImJ_T0081461.1 MGP_129S1SvImJ_G0031574.1 mouse_genomes_project 7 1963205 1969489 - MGP_129S1SvImJ_P0081461 Fiz1 protein_coding protein_coding MGP_129S1SvImJ_T0081462.1 MGP_129S1SvImJ_G0031574.1 mouse_genomes_project 7 1963205 1970940 - MGP_129S1SvImJ_P0081462 Fiz1 protein_coding protein_coding MGP_129S1SvImJ_T0084780.1 MGP_129S1SvImJ_G0032439.1 mouse_genomes_project 7 83952882 83977519 + MGP_129S1SvImJ_P0084780 Tm6sf1 protein_coding protein_coding MGP_129S1SvImJ_T0084781.1 MGP_129S1SvImJ_G0032439.1 mouse_genomes_project 7 83952901 83967760 + Tm6sf1 protein_coding retained_intron MGP_129S1SvImJ_T0084782.1 MGP_129S1SvImJ_G0032439.1 mouse_genomes_project 7 83952999 83959282 + Tm6sf1 protein_coding processed_transcript MGP_129S1SvImJ_T0084783.1 MGP_129S1SvImJ_G0032439.1 mouse_genomes_project 7 83953032 83977882 + MGP_129S1SvImJ_P0084783 Tm6sf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084784.1 MGP_129S1SvImJ_G0032439.1 mouse_genomes_project 7 83953330 83971806 + MGP_129S1SvImJ_P0084784 Tm6sf1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0084785.1 MGP_129S1SvImJ_G0032439.1 mouse_genomes_project 7 83956572 83976863 + MGP_129S1SvImJ_P0084785 Tm6sf1 protein_coding protein_coding MGP_129S1SvImJ_T0084786.1 MGP_129S1SvImJ_G0032439.1 mouse_genomes_project 7 83963615 83966298 + Tm6sf1 protein_coding retained_intron MGP_129S1SvImJ_T0084787.1 MGP_129S1SvImJ_G0032439.1 mouse_genomes_project 7 83967375 83976851 + Tm6sf1 protein_coding retained_intron MGP_129S1SvImJ_T0085083.1 MGP_129S1SvImJ_G0032535.1 mouse_genomes_project 7 100869850 100871994 - MGP_129S1SvImJ_P0085083 Omp protein_coding protein_coding MGP_129S1SvImJ_T0083915.1 MGP_129S1SvImJ_G0032250.1 mouse_genomes_project 7 46147117 46152684 - MGP_129S1SvImJ_P0083915 Grwd1 protein_coding protein_coding MGP_129S1SvImJ_T0083916.1 MGP_129S1SvImJ_G0032250.1 mouse_genomes_project 7 46147120 46152671 - MGP_129S1SvImJ_P0083916 Grwd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083917.1 MGP_129S1SvImJ_G0032250.1 mouse_genomes_project 7 46147122 46152839 - MGP_129S1SvImJ_P0083917 Grwd1 protein_coding protein_coding MGP_129S1SvImJ_T0083918.1 MGP_129S1SvImJ_G0032250.1 mouse_genomes_project 7 46147953 46152776 - MGP_129S1SvImJ_P0083918 Grwd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0015723.1 MGP_129S1SvImJ_G0013812.1 mouse_genomes_project 7 11053136 11056569 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002243.1 MGP_129S1SvImJ_G0002155.1 mouse_genomes_project 7 40468545 40469038 - TEC TEC MGP_129S1SvImJ_T0015776.1 MGP_129S1SvImJ_G0013865.1 mouse_genomes_project 7 33275199 33275342 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081708.1 MGP_129S1SvImJ_G0031691.1 mouse_genomes_project 7 13492489 13506340 - MGP_129S1SvImJ_P0081708 Crx protein_coding protein_coding MGP_129S1SvImJ_T0081709.1 MGP_129S1SvImJ_G0031691.1 mouse_genomes_project 7 13492490 13498903 - MGP_129S1SvImJ_P0081709 Crx protein_coding protein_coding MGP_129S1SvImJ_T0081710.1 MGP_129S1SvImJ_G0031691.1 mouse_genomes_project 7 13493768 13506244 - Crx protein_coding processed_transcript MGP_129S1SvImJ_T0081711.1 MGP_129S1SvImJ_G0031691.1 mouse_genomes_project 7 13493768 13506216 - MGP_129S1SvImJ_P0081711 Crx protein_coding protein_coding MGP_129S1SvImJ_T0081712.1 MGP_129S1SvImJ_G0031691.1 mouse_genomes_project 7 13494598 13497947 - MGP_129S1SvImJ_P0081712 Crx protein_coding protein_coding MGP_129S1SvImJ_T0005199.1 MGP_129S1SvImJ_G0004428.1 mouse_genomes_project 7 28063053 28064299 + 1110035H17Rik antisense pseudogene MGP_129S1SvImJ_T0005200.1 MGP_129S1SvImJ_G0004428.1 mouse_genomes_project 7 28063053 28064301 + 1110035H17Rik antisense antisense MGP_129S1SvImJ_T0082208.1 MGP_129S1SvImJ_G0031842.1 mouse_genomes_project 7 23113704 23142278 - MGP_129S1SvImJ_P0082208 Cd177 protein_coding protein_coding MGP_129S1SvImJ_T0082209.1 MGP_129S1SvImJ_G0031842.1 mouse_genomes_project 7 23114848 23120543 - Cd177 protein_coding retained_intron MGP_129S1SvImJ_T0084690.1 MGP_129S1SvImJ_G0032417.1 mouse_genomes_project 7 82565930 82676365 - MGP_129S1SvImJ_P0084690 Crtc3 protein_coding protein_coding MGP_129S1SvImJ_T0084691.1 MGP_129S1SvImJ_G0032417.1 mouse_genomes_project 7 82572131 82591216 - MGP_129S1SvImJ_P0084691 Crtc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084692.1 MGP_129S1SvImJ_G0032417.1 mouse_genomes_project 7 82575024 82579250 - Crtc3 protein_coding retained_intron MGP_129S1SvImJ_T0084693.1 MGP_129S1SvImJ_G0032417.1 mouse_genomes_project 7 82575086 82612543 - MGP_129S1SvImJ_P0084693 Crtc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084694.1 MGP_129S1SvImJ_G0032417.1 mouse_genomes_project 7 82599363 82612624 - Crtc3 protein_coding retained_intron MGP_129S1SvImJ_T0084695.1 MGP_129S1SvImJ_G0032417.1 mouse_genomes_project 7 82657239 82676365 - Crtc3 protein_coding retained_intron MGP_129S1SvImJ_T0086848.1 MGP_129S1SvImJ_G0033049.1 mouse_genomes_project 7 132083368 132088825 + MGP_129S1SvImJ_P0086848 Ctf1 protein_coding protein_coding MGP_129S1SvImJ_T0086849.1 MGP_129S1SvImJ_G0033049.1 mouse_genomes_project 7 132083569 132087963 + MGP_129S1SvImJ_P0086849 Ctf1 protein_coding protein_coding MGP_129S1SvImJ_T0086850.1 MGP_129S1SvImJ_G0033049.1 mouse_genomes_project 7 132083576 132088223 + MGP_129S1SvImJ_P0086850 Ctf1 protein_coding protein_coding MGP_129S1SvImJ_T0086851.1 MGP_129S1SvImJ_G0033049.1 mouse_genomes_project 7 132083932 132087659 + Ctf1 protein_coding processed_transcript MGP_129S1SvImJ_T0086852.1 MGP_129S1SvImJ_G0033049.1 mouse_genomes_project 7 132084189 132087672 + Ctf1 protein_coding processed_transcript MGP_129S1SvImJ_T0008877.1 MGP_129S1SvImJ_G0007171.1 mouse_genomes_project 7 44381975 44388990 + Gm36864 lincRNA lincRNA MGP_129S1SvImJ_T0087702.1 MGP_129S1SvImJ_G0033254.1 mouse_genomes_project 7 147618522 147630038 - MGP_129S1SvImJ_P0087702 Ctsd protein_coding protein_coding MGP_129S1SvImJ_T0087703.1 MGP_129S1SvImJ_G0033254.1 mouse_genomes_project 7 147623280 147635409 - MGP_129S1SvImJ_P0087703 Ctsd protein_coding protein_coding MGP_129S1SvImJ_T0087704.1 MGP_129S1SvImJ_G0033254.1 mouse_genomes_project 7 147623299 147635190 - MGP_129S1SvImJ_P0087704 Ctsd protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087705.1 MGP_129S1SvImJ_G0033254.1 mouse_genomes_project 7 147630564 147635190 - Ctsd protein_coding retained_intron MGP_129S1SvImJ_T0085382.1 MGP_129S1SvImJ_G0032598.1 mouse_genomes_project 7 105093235 105112924 + MGP_129S1SvImJ_P0085382 Xndc1 protein_coding protein_coding MGP_129S1SvImJ_T0085383.1 MGP_129S1SvImJ_G0032598.1 mouse_genomes_project 7 105093244 105109456 + Xndc1 protein_coding retained_intron MGP_129S1SvImJ_T0085384.1 MGP_129S1SvImJ_G0032598.1 mouse_genomes_project 7 105093246 105097781 + Xndc1 protein_coding processed_transcript MGP_129S1SvImJ_T0085385.1 MGP_129S1SvImJ_G0032598.1 mouse_genomes_project 7 105093318 105107077 + MGP_129S1SvImJ_P0085385 Xndc1 protein_coding protein_coding MGP_129S1SvImJ_T0085388.1 MGP_129S1SvImJ_G0032598.1 mouse_genomes_project 7 105093483 105112243 + MGP_129S1SvImJ_P0085388 Xndc1 protein_coding protein_coding MGP_129S1SvImJ_T0085392.1 MGP_129S1SvImJ_G0032598.1 mouse_genomes_project 7 105105313 105108427 + Xndc1 protein_coding retained_intron MGP_129S1SvImJ_T0085393.1 MGP_129S1SvImJ_G0032598.1 mouse_genomes_project 7 105107944 105112927 + MGP_129S1SvImJ_P0085393 Xndc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085394.1 MGP_129S1SvImJ_G0032598.1 mouse_genomes_project 7 105110219 105111753 + Xndc1 protein_coding processed_transcript MGP_129S1SvImJ_T0085395.1 MGP_129S1SvImJ_G0032598.1 mouse_genomes_project 7 105110222 105111683 + Xndc1 protein_coding retained_intron MGP_129S1SvImJ_T0083269.1 MGP_129S1SvImJ_G0032084.1 mouse_genomes_project 7 34558132 34561066 - Lrp3 protein_coding processed_transcript MGP_129S1SvImJ_T0083270.1 MGP_129S1SvImJ_G0032084.1 mouse_genomes_project 7 34558983 34561332 - Lrp3 protein_coding retained_intron MGP_129S1SvImJ_T0083271.1 MGP_129S1SvImJ_G0032084.1 mouse_genomes_project 7 34558983 34574902 - MGP_129S1SvImJ_P0083271 Lrp3 protein_coding protein_coding MGP_129S1SvImJ_T0083272.1 MGP_129S1SvImJ_G0032084.1 mouse_genomes_project 7 34558984 34574807 - MGP_129S1SvImJ_P0083272 Lrp3 protein_coding protein_coding MGP_129S1SvImJ_T0085688.1 MGP_129S1SvImJ_G0032762.1 mouse_genomes_project 7 109005880 109012201 + MGP_129S1SvImJ_P0085688 Ilk protein_coding protein_coding MGP_129S1SvImJ_T0085689.1 MGP_129S1SvImJ_G0032762.1 mouse_genomes_project 7 109005959 109012194 + Ilk protein_coding retained_intron MGP_129S1SvImJ_T0085690.1 MGP_129S1SvImJ_G0032762.1 mouse_genomes_project 7 109006013 109012201 + MGP_129S1SvImJ_P0085690 Ilk protein_coding protein_coding MGP_129S1SvImJ_T0085691.1 MGP_129S1SvImJ_G0032762.1 mouse_genomes_project 7 109006021 109010319 + MGP_129S1SvImJ_P0085691 Ilk protein_coding protein_coding MGP_129S1SvImJ_T0085692.1 MGP_129S1SvImJ_G0032762.1 mouse_genomes_project 7 109006389 109010637 + Ilk protein_coding retained_intron MGP_129S1SvImJ_T0085693.1 MGP_129S1SvImJ_G0032762.1 mouse_genomes_project 7 109006411 109010751 + Ilk protein_coding retained_intron MGP_129S1SvImJ_T0085695.1 MGP_129S1SvImJ_G0032762.1 mouse_genomes_project 7 109009463 109011040 + Ilk protein_coding retained_intron MGP_129S1SvImJ_T0085696.1 MGP_129S1SvImJ_G0032762.1 mouse_genomes_project 7 109009786 109010450 + Ilk protein_coding retained_intron MGP_129S1SvImJ_T0085697.1 MGP_129S1SvImJ_G0032762.1 mouse_genomes_project 7 109009786 109011184 + MGP_129S1SvImJ_P0085697 Ilk protein_coding protein_coding MGP_129S1SvImJ_T0085698.1 MGP_129S1SvImJ_G0032762.1 mouse_genomes_project 7 109010247 109011186 + Ilk protein_coding retained_intron MGP_129S1SvImJ_T0085699.1 MGP_129S1SvImJ_G0032762.1 mouse_genomes_project 7 109010457 109011372 + Ilk protein_coding retained_intron MGP_129S1SvImJ_T0085700.1 MGP_129S1SvImJ_G0032762.1 mouse_genomes_project 7 109010858 109012052 + Ilk protein_coding retained_intron MGP_129S1SvImJ_T0085701.1 MGP_129S1SvImJ_G0032762.1 mouse_genomes_project 7 109011056 109011933 + Ilk protein_coding processed_transcript MGP_129S1SvImJ_T0085160.1 MGP_129S1SvImJ_G0032554.1 mouse_genomes_project 7 102473977 102529461 - MGP_129S1SvImJ_P0085160 Slco2b1 protein_coding protein_coding MGP_129S1SvImJ_T0085161.1 MGP_129S1SvImJ_G0032554.1 mouse_genomes_project 7 102474562 102513947 - MGP_129S1SvImJ_P0085161 Slco2b1 protein_coding protein_coding MGP_129S1SvImJ_T0085162.1 MGP_129S1SvImJ_G0032554.1 mouse_genomes_project 7 102474562 102525265 - MGP_129S1SvImJ_P0085162 Slco2b1 protein_coding protein_coding MGP_129S1SvImJ_T0085163.1 MGP_129S1SvImJ_G0032554.1 mouse_genomes_project 7 102476034 102481107 - MGP_129S1SvImJ_P0085163 Slco2b1 protein_coding protein_coding MGP_129S1SvImJ_T0085164.1 MGP_129S1SvImJ_G0032554.1 mouse_genomes_project 7 102504967 102513766 - MGP_129S1SvImJ_P0085164 Slco2b1 protein_coding protein_coding MGP_129S1SvImJ_T0085165.1 MGP_129S1SvImJ_G0032554.1 mouse_genomes_project 7 102506568 102513720 - MGP_129S1SvImJ_P0085165 Slco2b1 protein_coding protein_coding MGP_129S1SvImJ_T0083914.1 MGP_129S1SvImJ_G0032249.1 mouse_genomes_project 7 46137658 46146640 - MGP_129S1SvImJ_P0083914 protein_coding protein_coding MGP_129S1SvImJ_T0081939.1 MGP_129S1SvImJ_G0031760.1 mouse_genomes_project 7 17074303 17096844 + MGP_129S1SvImJ_P0081939 Fbxo46 protein_coding protein_coding MGP_129S1SvImJ_T0081940.1 MGP_129S1SvImJ_G0031760.1 mouse_genomes_project 7 17088020 17094454 + MGP_129S1SvImJ_P0081940 Fbxo46 protein_coding protein_coding MGP_129S1SvImJ_T0082006.1 MGP_129S1SvImJ_G0031776.1 mouse_genomes_project 7 17410448 17420972 + MGP_129S1SvImJ_P0082006 Ckm protein_coding protein_coding MGP_129S1SvImJ_T0087686.1 MGP_129S1SvImJ_G0033244.1 mouse_genomes_project 7 147213398 147267616 - MGP_129S1SvImJ_P0087686 Mob2 protein_coding protein_coding MGP_129S1SvImJ_T0101346.1 MGP_129S1SvImJ_G0039413.1 mouse_genomes_project 7 116203555 116203685 - Gm24154 snoRNA snoRNA MGP_129S1SvImJ_T0085611.1 MGP_129S1SvImJ_G0032749.1 mouse_genomes_project 7 108615220 108644050 - MGP_129S1SvImJ_P0085611 Fam160a2 protein_coding protein_coding MGP_129S1SvImJ_T0085612.1 MGP_129S1SvImJ_G0032749.1 mouse_genomes_project 7 108615220 108644072 - MGP_129S1SvImJ_P0085612 Fam160a2 protein_coding protein_coding MGP_129S1SvImJ_T0085614.1 MGP_129S1SvImJ_G0032749.1 mouse_genomes_project 7 108622619 108644003 - MGP_129S1SvImJ_P0085614 Fam160a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085615.1 MGP_129S1SvImJ_G0032749.1 mouse_genomes_project 7 108622619 108644072 - MGP_129S1SvImJ_P0085615 Fam160a2 protein_coding protein_coding MGP_129S1SvImJ_T0085616.1 MGP_129S1SvImJ_G0032749.1 mouse_genomes_project 7 108622620 108644029 - MGP_129S1SvImJ_P0085616 Fam160a2 protein_coding protein_coding MGP_129S1SvImJ_T0085617.1 MGP_129S1SvImJ_G0032749.1 mouse_genomes_project 7 108622620 108644026 - MGP_129S1SvImJ_P0085617 Fam160a2 protein_coding protein_coding MGP_129S1SvImJ_T0085618.1 MGP_129S1SvImJ_G0032749.1 mouse_genomes_project 7 108623085 108625991 - Fam160a2 protein_coding retained_intron MGP_129S1SvImJ_T0085619.1 MGP_129S1SvImJ_G0032749.1 mouse_genomes_project 7 108629397 108633121 - Fam160a2 protein_coding retained_intron MGP_129S1SvImJ_T0086503.1 MGP_129S1SvImJ_G0032987.1 mouse_genomes_project 7 130868213 130872384 + MGP_129S1SvImJ_P0086503 Apobr protein_coding protein_coding MGP_129S1SvImJ_T0086504.1 MGP_129S1SvImJ_G0032987.1 mouse_genomes_project 7 130868262 130871223 + MGP_129S1SvImJ_P0086504 Apobr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086505.1 MGP_129S1SvImJ_G0032987.1 mouse_genomes_project 7 130868263 130871642 + MGP_129S1SvImJ_P0086505 Apobr protein_coding protein_coding MGP_129S1SvImJ_T0086506.1 MGP_129S1SvImJ_G0032987.1 mouse_genomes_project 7 130870351 130871717 + MGP_129S1SvImJ_P0086506 Apobr protein_coding protein_coding MGP_129S1SvImJ_T0086507.1 MGP_129S1SvImJ_G0032987.1 mouse_genomes_project 7 130870945 130871597 + MGP_129S1SvImJ_P0086507 Apobr protein_coding protein_coding MGP_129S1SvImJ_T0087206.1 MGP_129S1SvImJ_G0033120.1 mouse_genomes_project 7 138340357 138356559 - MGP_129S1SvImJ_P0087206 Tex36 protein_coding protein_coding MGP_129S1SvImJ_T0081702.1 MGP_129S1SvImJ_G0031688.1 mouse_genomes_project 7 13004615 13005962 + MGP_129S1SvImJ_P0081702 protein_coding protein_coding MGP_129S1SvImJ_T0081703.1 MGP_129S1SvImJ_G0031688.1 mouse_genomes_project 7 13004615 13005966 + MGP_129S1SvImJ_P0081703 protein_coding protein_coding MGP_129S1SvImJ_T0081704.1 MGP_129S1SvImJ_G0031688.1 mouse_genomes_project 7 13004615 13005817 + MGP_129S1SvImJ_P0081704 protein_coding protein_coding MGP_129S1SvImJ_T0081705.1 MGP_129S1SvImJ_G0031688.1 mouse_genomes_project 7 13004615 13006368 + MGP_129S1SvImJ_P0081705 protein_coding protein_coding MGP_129S1SvImJ_T0084378.1 MGP_129S1SvImJ_G0032361.1 mouse_genomes_project 7 69001706 69034822 - MGP_129S1SvImJ_P0084378 Synm protein_coding protein_coding MGP_129S1SvImJ_T0084379.1 MGP_129S1SvImJ_G0032361.1 mouse_genomes_project 7 69001706 69034822 - MGP_129S1SvImJ_P0084379 Synm protein_coding protein_coding MGP_129S1SvImJ_T0087472.1 MGP_129S1SvImJ_G0033207.1 mouse_genomes_project 7 146184103 146184593 + MGP_129S1SvImJ_P0087472 Gm17387 protein_coding protein_coding MGP_129S1SvImJ_T0015778.1 MGP_129S1SvImJ_G0013867.1 mouse_genomes_project 7 33660230 33660646 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085730.1 MGP_129S1SvImJ_G0032780.1 mouse_genomes_project 7 110245879 110246830 - MGP_129S1SvImJ_P0085730 protein_coding protein_coding MGP_129S1SvImJ_T0085440.1 MGP_129S1SvImJ_G0032614.1 mouse_genomes_project 7 105622919 105630452 - MGP_129S1SvImJ_P0085440 Trim21 protein_coding protein_coding MGP_129S1SvImJ_T0085441.1 MGP_129S1SvImJ_G0032614.1 mouse_genomes_project 7 105622919 105630452 - MGP_129S1SvImJ_P0085441 Trim21 protein_coding protein_coding MGP_129S1SvImJ_T0100090.1 MGP_129S1SvImJ_G0038157.1 mouse_genomes_project 7 130843361 130843468 - Gm24596 snRNA snRNA MGP_129S1SvImJ_T0008914.1 MGP_129S1SvImJ_G0007198.1 mouse_genomes_project 7 73461211 73476858 - Gm36633 lincRNA lincRNA MGP_129S1SvImJ_T0085778.1 MGP_129S1SvImJ_G0032821.1 mouse_genomes_project 7 111902070 111903129 - MGP_129S1SvImJ_P0085778 Olfr502 protein_coding protein_coding MGP_129S1SvImJ_T0015861.1 MGP_129S1SvImJ_G0013950.1 mouse_genomes_project 7 87103332 87104455 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005273.1 MGP_129S1SvImJ_G0004480.1 mouse_genomes_project 7 99013502 99015984 - Gm15412 antisense antisense MGP_129S1SvImJ_T0082310.1 MGP_129S1SvImJ_G0031862.1 mouse_genomes_project 7 23760990 23763658 + Tmem145 protein_coding retained_intron MGP_129S1SvImJ_T0082311.1 MGP_129S1SvImJ_G0031862.1 mouse_genomes_project 7 23760992 23771988 + MGP_129S1SvImJ_P0082311 Tmem145 protein_coding protein_coding MGP_129S1SvImJ_T0082312.1 MGP_129S1SvImJ_G0031862.1 mouse_genomes_project 7 23760992 23771975 + MGP_129S1SvImJ_P0082312 Tmem145 protein_coding protein_coding MGP_129S1SvImJ_T0082313.1 MGP_129S1SvImJ_G0031862.1 mouse_genomes_project 7 23770832 23771985 + Tmem145 protein_coding retained_intron MGP_129S1SvImJ_T0082044.1 MGP_129S1SvImJ_G0031790.1 mouse_genomes_project 7 17717812 17721157 - MGP_129S1SvImJ_P0082044 Apoc4 protein_coding protein_coding MGP_129S1SvImJ_T0008955.1 MGP_129S1SvImJ_G0007227.1 mouse_genomes_project 7 82267470 82269351 - 6330403N20Rik lincRNA lincRNA MGP_129S1SvImJ_T0015813.1 MGP_129S1SvImJ_G0013902.1 mouse_genomes_project 7 48707574 48708244 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082619.1 MGP_129S1SvImJ_G0031943.1 mouse_genomes_project 7 27168835 27176587 - MGP_129S1SvImJ_P0082619 Med29 protein_coding protein_coding MGP_129S1SvImJ_T0010927.1 MGP_129S1SvImJ_G0009043.1 mouse_genomes_project 7 98922050 98922159 + Mir708 miRNA miRNA MGP_129S1SvImJ_T0008917.1 MGP_129S1SvImJ_G0007201.1 mouse_genomes_project 7 74189417 74189757 - Gm28744 lincRNA lincRNA MGP_129S1SvImJ_T0085754.1 MGP_129S1SvImJ_G0032798.1 mouse_genomes_project 7 110962696 110963864 - MGP_129S1SvImJ_P0085754 5330417H12Rik protein_coding protein_coding MGP_129S1SvImJ_T0084579.1 MGP_129S1SvImJ_G0032402.1 mouse_genomes_project 7 82037377 82057941 - MGP_129S1SvImJ_P0084579 Idh2 protein_coding protein_coding MGP_129S1SvImJ_T0084580.1 MGP_129S1SvImJ_G0032402.1 mouse_genomes_project 7 82037381 82057881 - MGP_129S1SvImJ_P0084580 Idh2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084581.1 MGP_129S1SvImJ_G0032402.1 mouse_genomes_project 7 82037560 82040934 - Idh2 protein_coding retained_intron MGP_129S1SvImJ_T0084582.1 MGP_129S1SvImJ_G0032402.1 mouse_genomes_project 7 82037574 82038560 - Idh2 protein_coding retained_intron MGP_129S1SvImJ_T0084583.1 MGP_129S1SvImJ_G0032402.1 mouse_genomes_project 7 82037590 82057853 - MGP_129S1SvImJ_P0084583 Idh2 protein_coding protein_coding MGP_129S1SvImJ_T0084584.1 MGP_129S1SvImJ_G0032402.1 mouse_genomes_project 7 82038558 82043406 - MGP_129S1SvImJ_P0084584 Idh2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084585.1 MGP_129S1SvImJ_G0032402.1 mouse_genomes_project 7 82040696 82041664 - Idh2 protein_coding retained_intron MGP_129S1SvImJ_T0084604.1 MGP_129S1SvImJ_G0032407.1 mouse_genomes_project 7 82229461 82234931 + MGP_129S1SvImJ_P0084604 Ngrn protein_coding protein_coding MGP_129S1SvImJ_T0084605.1 MGP_129S1SvImJ_G0032407.1 mouse_genomes_project 7 82229466 82234931 + Ngrn protein_coding retained_intron MGP_129S1SvImJ_T0085240.1 MGP_129S1SvImJ_G0032575.1 mouse_genomes_project 7 103541733 103557568 - MGP_129S1SvImJ_P0085240 Plekhb1 protein_coding protein_coding MGP_129S1SvImJ_T0085241.1 MGP_129S1SvImJ_G0032575.1 mouse_genomes_project 7 103542711 103557595 - MGP_129S1SvImJ_P0085241 Plekhb1 protein_coding protein_coding MGP_129S1SvImJ_T0085242.1 MGP_129S1SvImJ_G0032575.1 mouse_genomes_project 7 103542711 103563308 - MGP_129S1SvImJ_P0085242 Plekhb1 protein_coding protein_coding MGP_129S1SvImJ_T0085243.1 MGP_129S1SvImJ_G0032575.1 mouse_genomes_project 7 103542711 103563259 - MGP_129S1SvImJ_P0085243 Plekhb1 protein_coding protein_coding MGP_129S1SvImJ_T0085244.1 MGP_129S1SvImJ_G0032575.1 mouse_genomes_project 7 103542715 103559071 - MGP_129S1SvImJ_P0085244 Plekhb1 protein_coding protein_coding MGP_129S1SvImJ_T0085245.1 MGP_129S1SvImJ_G0032575.1 mouse_genomes_project 7 103542715 103559071 - MGP_129S1SvImJ_P0085245 Plekhb1 protein_coding protein_coding MGP_129S1SvImJ_T0085246.1 MGP_129S1SvImJ_G0032575.1 mouse_genomes_project 7 103543458 103558979 - MGP_129S1SvImJ_P0085246 Plekhb1 protein_coding protein_coding MGP_129S1SvImJ_T0085247.1 MGP_129S1SvImJ_G0032575.1 mouse_genomes_project 7 103543619 103554406 - Plekhb1 protein_coding retained_intron MGP_129S1SvImJ_T0085248.1 MGP_129S1SvImJ_G0032575.1 mouse_genomes_project 7 103543761 103563209 - MGP_129S1SvImJ_P0085248 Plekhb1 protein_coding protein_coding MGP_129S1SvImJ_T0085249.1 MGP_129S1SvImJ_G0032575.1 mouse_genomes_project 7 103544383 103557718 - MGP_129S1SvImJ_P0085249 Plekhb1 protein_coding protein_coding MGP_129S1SvImJ_T0085250.1 MGP_129S1SvImJ_G0032575.1 mouse_genomes_project 7 103544451 103559037 - MGP_129S1SvImJ_P0085250 Plekhb1 protein_coding protein_coding MGP_129S1SvImJ_T0010904.1 MGP_129S1SvImJ_G0009020.1 mouse_genomes_project 7 62773503 62773601 - Gm23917 miRNA miRNA MGP_129S1SvImJ_T0087504.1 MGP_129S1SvImJ_G0033215.1 mouse_genomes_project 7 146370321 146377081 + Lrrc56 protein_coding retained_intron MGP_129S1SvImJ_T0087505.1 MGP_129S1SvImJ_G0033215.1 mouse_genomes_project 7 146370539 146385873 + MGP_129S1SvImJ_P0087505 Lrrc56 protein_coding protein_coding MGP_129S1SvImJ_T0087506.1 MGP_129S1SvImJ_G0033215.1 mouse_genomes_project 7 146371285 146374426 + Lrrc56 protein_coding processed_transcript MGP_129S1SvImJ_T0087507.1 MGP_129S1SvImJ_G0033215.1 mouse_genomes_project 7 146373076 146375978 + Lrrc56 protein_coding processed_transcript MGP_129S1SvImJ_T0083238.1 MGP_129S1SvImJ_G0032078.1 mouse_genomes_project 7 33946325 33966471 - MGP_129S1SvImJ_P0083238 Kctd15 protein_coding protein_coding MGP_129S1SvImJ_T0083239.1 MGP_129S1SvImJ_G0032078.1 mouse_genomes_project 7 33946326 33964911 - MGP_129S1SvImJ_P0083239 Kctd15 protein_coding protein_coding MGP_129S1SvImJ_T0083240.1 MGP_129S1SvImJ_G0032078.1 mouse_genomes_project 7 33946330 33969510 - MGP_129S1SvImJ_P0083240 Kctd15 protein_coding protein_coding MGP_129S1SvImJ_T0083241.1 MGP_129S1SvImJ_G0032078.1 mouse_genomes_project 7 33947493 33958202 - Kctd15 protein_coding processed_transcript MGP_129S1SvImJ_T0083242.1 MGP_129S1SvImJ_G0032078.1 mouse_genomes_project 7 33959444 33966462 - MGP_129S1SvImJ_P0083242 Kctd15 protein_coding protein_coding MGP_129S1SvImJ_T0083243.1 MGP_129S1SvImJ_G0032078.1 mouse_genomes_project 7 33964705 33965100 - Kctd15 protein_coding processed_transcript MGP_129S1SvImJ_T0083244.1 MGP_129S1SvImJ_G0032078.1 mouse_genomes_project 7 33964705 33965386 - Kctd15 protein_coding processed_transcript MGP_129S1SvImJ_T0083245.1 MGP_129S1SvImJ_G0032078.1 mouse_genomes_project 7 33969370 33970726 - Kctd15 protein_coding processed_transcript MGP_129S1SvImJ_T0087316.1 MGP_129S1SvImJ_G0033150.1 mouse_genomes_project 7 144407921 144610058 + MGP_129S1SvImJ_P0087316 Inpp5a protein_coding protein_coding MGP_129S1SvImJ_T0087317.1 MGP_129S1SvImJ_G0033150.1 mouse_genomes_project 7 144407922 144610058 + MGP_129S1SvImJ_P0087317 Inpp5a protein_coding protein_coding MGP_129S1SvImJ_T0087318.1 MGP_129S1SvImJ_G0033150.1 mouse_genomes_project 7 144419290 144609631 + MGP_129S1SvImJ_P0087318 Inpp5a protein_coding protein_coding MGP_129S1SvImJ_T0087319.1 MGP_129S1SvImJ_G0033150.1 mouse_genomes_project 7 144481097 144539494 + Inpp5a protein_coding processed_transcript MGP_129S1SvImJ_T0087320.1 MGP_129S1SvImJ_G0033150.1 mouse_genomes_project 7 144508477 144524781 + Inpp5a protein_coding processed_transcript MGP_129S1SvImJ_T0087321.1 MGP_129S1SvImJ_G0033150.1 mouse_genomes_project 7 144552097 144605615 + Inpp5a protein_coding processed_transcript MGP_129S1SvImJ_T0009023.1 MGP_129S1SvImJ_G0007267.1 mouse_genomes_project 7 129627679 129628800 - Gm44766 lincRNA lincRNA MGP_129S1SvImJ_T0015782.1 MGP_129S1SvImJ_G0013871.1 mouse_genomes_project 7 39060967 39061754 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101317.1 MGP_129S1SvImJ_G0039384.1 mouse_genomes_project 7 60146814 60417335 - snoRNA snoRNA MGP_129S1SvImJ_T0083100.1 MGP_129S1SvImJ_G0032054.1 mouse_genomes_project 7 30012354 30028014 - MGP_129S1SvImJ_P0083100 Lsr protein_coding protein_coding MGP_129S1SvImJ_T0083101.1 MGP_129S1SvImJ_G0032054.1 mouse_genomes_project 7 30012359 30028052 - MGP_129S1SvImJ_P0083101 Lsr protein_coding protein_coding MGP_129S1SvImJ_T0083102.1 MGP_129S1SvImJ_G0032054.1 mouse_genomes_project 7 30012361 30028015 - MGP_129S1SvImJ_P0083102 Lsr protein_coding protein_coding MGP_129S1SvImJ_T0083103.1 MGP_129S1SvImJ_G0032054.1 mouse_genomes_project 7 30012363 30027910 - MGP_129S1SvImJ_P0083103 Lsr protein_coding protein_coding MGP_129S1SvImJ_T0083104.1 MGP_129S1SvImJ_G0032054.1 mouse_genomes_project 7 30012846 30028003 - MGP_129S1SvImJ_P0083104 Lsr protein_coding protein_coding MGP_129S1SvImJ_T0083123.1 MGP_129S1SvImJ_G0032057.1 mouse_genomes_project 7 30101432 30110180 - MGP_129S1SvImJ_P0083123 Fxyd7 protein_coding protein_coding MGP_129S1SvImJ_T0083124.1 MGP_129S1SvImJ_G0032057.1 mouse_genomes_project 7 30101432 30110244 - MGP_129S1SvImJ_P0083124 Fxyd7 protein_coding protein_coding MGP_129S1SvImJ_T0083456.1 MGP_129S1SvImJ_G0032127.1 mouse_genomes_project 7 43476940 43485809 + MGP_129S1SvImJ_P0083456 Vsig10l protein_coding protein_coding MGP_129S1SvImJ_T0083457.1 MGP_129S1SvImJ_G0032127.1 mouse_genomes_project 7 43477022 43484834 + MGP_129S1SvImJ_P0083457 Vsig10l protein_coding protein_coding MGP_129S1SvImJ_T0083458.1 MGP_129S1SvImJ_G0032127.1 mouse_genomes_project 7 43478466 43479123 + Vsig10l protein_coding retained_intron MGP_129S1SvImJ_T0083459.1 MGP_129S1SvImJ_G0032127.1 mouse_genomes_project 7 43479503 43481468 + Vsig10l protein_coding processed_transcript MGP_129S1SvImJ_T0083460.1 MGP_129S1SvImJ_G0032127.1 mouse_genomes_project 7 43481404 43484789 + MGP_129S1SvImJ_P0083460 Vsig10l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0002281.1 MGP_129S1SvImJ_G0002192.1 mouse_genomes_project 7 75381526 75382216 - TEC TEC MGP_129S1SvImJ_T0082850.1 MGP_129S1SvImJ_G0032001.1 mouse_genomes_project 7 29087629 29106597 + MGP_129S1SvImJ_P0082850 Zfp382 protein_coding protein_coding MGP_129S1SvImJ_T0082851.1 MGP_129S1SvImJ_G0032001.1 mouse_genomes_project 7 29087657 29102736 + MGP_129S1SvImJ_P0082851 Zfp382 protein_coding protein_coding MGP_129S1SvImJ_T0082852.1 MGP_129S1SvImJ_G0032001.1 mouse_genomes_project 7 29096343 29105477 + Zfp382 protein_coding retained_intron MGP_129S1SvImJ_T0085434.1 MGP_129S1SvImJ_G0032608.1 mouse_genomes_project 7 105498432 105528192 + MGP_129S1SvImJ_P0085434 Rrm1 protein_coding protein_coding MGP_129S1SvImJ_T0084381.1 MGP_129S1SvImJ_G0032363.1 mouse_genomes_project 7 69534609 69568787 - MGP_129S1SvImJ_P0084381 Pgpep1l protein_coding protein_coding MGP_129S1SvImJ_T0005313.1 MGP_129S1SvImJ_G0004508.1 mouse_genomes_project 7 131918168 131932831 - Gm28198 antisense antisense MGP_129S1SvImJ_T0100095.1 MGP_129S1SvImJ_G0038162.1 mouse_genomes_project 7 133170537 133170639 + Gm23783 snRNA snRNA MGP_129S1SvImJ_T0015763.1 MGP_129S1SvImJ_G0013852.1 mouse_genomes_project 7 25656192 25656550 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082800.1 MGP_129S1SvImJ_G0031986.1 mouse_genomes_project 7 28693870 28705983 + MGP_129S1SvImJ_P0082800 Zfp84 protein_coding protein_coding MGP_129S1SvImJ_T0086481.1 MGP_129S1SvImJ_G0032985.1 mouse_genomes_project 7 130825863 130845904 - MGP_129S1SvImJ_P0086481 Eif3c protein_coding protein_coding MGP_129S1SvImJ_T0086482.1 MGP_129S1SvImJ_G0032985.1 mouse_genomes_project 7 130842076 130845851 - MGP_129S1SvImJ_P0086482 Eif3c protein_coding protein_coding MGP_129S1SvImJ_T0086483.1 MGP_129S1SvImJ_G0032985.1 mouse_genomes_project 7 130842491 130845697 - MGP_129S1SvImJ_P0086483 Eif3c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0009057.1 MGP_129S1SvImJ_G0007289.1 mouse_genomes_project 7 137600244 137641656 - 1500002F19Rik lincRNA lincRNA MGP_129S1SvImJ_T0086144.1 MGP_129S1SvImJ_G0032913.1 mouse_genomes_project 7 123456978 123509585 + MGP_129S1SvImJ_P0086144 Acsm2 protein_coding protein_coding MGP_129S1SvImJ_T0086145.1 MGP_129S1SvImJ_G0032913.1 mouse_genomes_project 7 123463901 123505532 + MGP_129S1SvImJ_P0086145 Acsm2 protein_coding protein_coding MGP_129S1SvImJ_T0086146.1 MGP_129S1SvImJ_G0032913.1 mouse_genomes_project 7 123464116 123509585 + MGP_129S1SvImJ_P0086146 Acsm2 protein_coding protein_coding MGP_129S1SvImJ_T0086147.1 MGP_129S1SvImJ_G0032913.1 mouse_genomes_project 7 123464120 123487358 + MGP_129S1SvImJ_P0086147 Acsm2 protein_coding protein_coding MGP_129S1SvImJ_T0086148.1 MGP_129S1SvImJ_G0032913.1 mouse_genomes_project 7 123464194 123491081 + Acsm2 protein_coding processed_transcript MGP_129S1SvImJ_T0086149.1 MGP_129S1SvImJ_G0032913.1 mouse_genomes_project 7 123489823 123505101 + MGP_129S1SvImJ_P0086149 Acsm2 protein_coding protein_coding MGP_129S1SvImJ_T0086150.1 MGP_129S1SvImJ_G0032913.1 mouse_genomes_project 7 123497781 123501484 + MGP_129S1SvImJ_P0086150 Acsm2 protein_coding protein_coding MGP_129S1SvImJ_T0086151.1 MGP_129S1SvImJ_G0032913.1 mouse_genomes_project 7 123499800 123500390 + Acsm2 protein_coding retained_intron MGP_129S1SvImJ_T0083556.1 MGP_129S1SvImJ_G0032162.1 mouse_genomes_project 7 44636095 44638464 + MGP_129S1SvImJ_P0083556 Aspdh protein_coding protein_coding MGP_129S1SvImJ_T0083557.1 MGP_129S1SvImJ_G0032162.1 mouse_genomes_project 7 44636113 44638040 + MGP_129S1SvImJ_P0083557 Aspdh protein_coding protein_coding MGP_129S1SvImJ_T0083558.1 MGP_129S1SvImJ_G0032162.1 mouse_genomes_project 7 44636121 44637927 + MGP_129S1SvImJ_P0083558 Aspdh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083559.1 MGP_129S1SvImJ_G0032162.1 mouse_genomes_project 7 44636130 44637918 + Aspdh protein_coding retained_intron MGP_129S1SvImJ_T0083560.1 MGP_129S1SvImJ_G0032162.1 mouse_genomes_project 7 44636148 44638022 + Aspdh protein_coding processed_transcript MGP_129S1SvImJ_T0083561.1 MGP_129S1SvImJ_G0032162.1 mouse_genomes_project 7 44637174 44638401 + MGP_129S1SvImJ_P0083561 Aspdh protein_coding protein_coding MGP_129S1SvImJ_T0010955.1 MGP_129S1SvImJ_G0009071.1 mouse_genomes_project 7 146824979 146825070 + Mir7063 miRNA miRNA MGP_129S1SvImJ_T0005246.1 MGP_129S1SvImJ_G0004462.1 mouse_genomes_project 7 75101483 75118310 + Gm44686 antisense antisense MGP_129S1SvImJ_T0005248.1 MGP_129S1SvImJ_G0004464.1 mouse_genomes_project 7 80052250 80053374 + 4921513I08Rik antisense antisense MGP_129S1SvImJ_T0101339.1 MGP_129S1SvImJ_G0039406.1 mouse_genomes_project 7 108905434 108905573 - Gm22504 snoRNA snoRNA MGP_129S1SvImJ_T0002286.1 MGP_129S1SvImJ_G0002197.1 mouse_genomes_project 7 77374155 77375457 + TEC TEC MGP_129S1SvImJ_T0018452.1 MGP_129S1SvImJ_G0015691.1 mouse_genomes_project 7 131252475 131264543 + Gm21984 processed_transcript processed_transcript MGP_129S1SvImJ_T0008934.1 MGP_129S1SvImJ_G0007215.1 mouse_genomes_project 7 76412887 76418145 + Gm30459 lincRNA lincRNA MGP_129S1SvImJ_T0002231.1 MGP_129S1SvImJ_G0002143.1 mouse_genomes_project 7 36169047 36169969 + TEC TEC MGP_129S1SvImJ_T0082717.1 MGP_129S1SvImJ_G0031969.1 mouse_genomes_project 7 27870868 27895379 + MGP_129S1SvImJ_P0082717 Map4k1 protein_coding protein_coding MGP_129S1SvImJ_T0082718.1 MGP_129S1SvImJ_G0031969.1 mouse_genomes_project 7 27870970 27895374 + MGP_129S1SvImJ_P0082718 Map4k1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0081487.1 MGP_129S1SvImJ_G0031592.1 mouse_genomes_project 7 3042303 3045565 - MGP_129S1SvImJ_P0081487 Vmn1r65 protein_coding protein_coding MGP_129S1SvImJ_T0011705.1 MGP_129S1SvImJ_G0009821.1 mouse_genomes_project 7 44385546 44385834 + Gm25386 misc_RNA misc_RNA MGP_129S1SvImJ_T0084815.1 MGP_129S1SvImJ_G0032446.1 mouse_genomes_project 7 85005885 85011184 + MGP_129S1SvImJ_P0084815 Mex3b protein_coding protein_coding MGP_129S1SvImJ_T0005220.1 MGP_129S1SvImJ_G0004445.1 mouse_genomes_project 7 34949392 34950961 + B230322F03Rik antisense antisense MGP_129S1SvImJ_T0015726.1 MGP_129S1SvImJ_G0013815.1 mouse_genomes_project 7 11488151 11488329 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082918.1 MGP_129S1SvImJ_G0032014.1 mouse_genomes_project 7 29305953 29308443 - MGP_129S1SvImJ_P0082918 Sdhaf1 protein_coding protein_coding MGP_129S1SvImJ_T0081843.1 MGP_129S1SvImJ_G0031726.1 mouse_genomes_project 7 14768106 14772693 + MGP_129S1SvImJ_P0081843 Ccdc8 protein_coding protein_coding MGP_129S1SvImJ_T0002237.1 MGP_129S1SvImJ_G0002149.1 mouse_genomes_project 7 36967910 36970213 - TEC TEC MGP_129S1SvImJ_T0085467.1 MGP_129S1SvImJ_G0032638.1 mouse_genomes_project 7 106114944 106116565 + MGP_129S1SvImJ_P0085467 Olfr582 protein_coding protein_coding MGP_129S1SvImJ_T0085509.1 MGP_129S1SvImJ_G0032678.1 mouse_genomes_project 7 106958195 106959261 - MGP_129S1SvImJ_P0085509 Olfr630 protein_coding protein_coding MGP_129S1SvImJ_T0015924.1 MGP_129S1SvImJ_G0014013.1 mouse_genomes_project 7 131744970 131745258 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084024.1 MGP_129S1SvImJ_G0032279.1 mouse_genomes_project 7 47408188 47426986 - MGP_129S1SvImJ_P0084024 Spty2d1 protein_coding protein_coding MGP_129S1SvImJ_T0085732.1 MGP_129S1SvImJ_G0032782.1 mouse_genomes_project 7 110274282 110275418 + MGP_129S1SvImJ_P0085732 protein_coding protein_coding MGP_129S1SvImJ_T0087343.1 MGP_129S1SvImJ_G0033156.1 mouse_genomes_project 7 145048050 145054430 - 6430531B16Rik protein_coding retained_intron MGP_129S1SvImJ_T0087344.1 MGP_129S1SvImJ_G0033156.1 mouse_genomes_project 7 145048050 145054462 - MGP_129S1SvImJ_P0087344 6430531B16Rik protein_coding protein_coding MGP_129S1SvImJ_T0087345.1 MGP_129S1SvImJ_G0033156.1 mouse_genomes_project 7 145051202 145054430 - MGP_129S1SvImJ_P0087345 6430531B16Rik protein_coding protein_coding MGP_129S1SvImJ_T0081829.1 MGP_129S1SvImJ_G0031721.1 mouse_genomes_project 7 14659775 14663377 + MGP_129S1SvImJ_P0081829 Gng8 protein_coding protein_coding MGP_129S1SvImJ_T0081830.1 MGP_129S1SvImJ_G0031721.1 mouse_genomes_project 7 14660201 14663387 + MGP_129S1SvImJ_P0081830 Gng8 protein_coding protein_coding MGP_129S1SvImJ_T0081831.1 MGP_129S1SvImJ_G0031721.1 mouse_genomes_project 7 14660260 14663375 + MGP_129S1SvImJ_P0081831 Gng8 protein_coding protein_coding MGP_129S1SvImJ_T0081832.1 MGP_129S1SvImJ_G0031721.1 mouse_genomes_project 7 14660310 14663378 + Gng8 protein_coding processed_transcript MGP_129S1SvImJ_T0081833.1 MGP_129S1SvImJ_G0031721.1 mouse_genomes_project 7 14662598 14663388 + Gng8 protein_coding retained_intron MGP_129S1SvImJ_T0081834.1 MGP_129S1SvImJ_G0031721.1 mouse_genomes_project 7 14662896 14663315 + Gng8 protein_coding retained_intron MGP_129S1SvImJ_T0102805.1 MGP_129S1SvImJ_G0040637.1 mouse_genomes_project 7 106603169 106604136 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0087689.1 MGP_129S1SvImJ_G0033246.1 mouse_genomes_project 7 147351529 147352789 - MGP_129S1SvImJ_P0087689 protein_coding protein_coding MGP_129S1SvImJ_T0085991.1 MGP_129S1SvImJ_G0032884.1 mouse_genomes_project 7 118306166 118311008 - MGP_129S1SvImJ_P0085991 Calca protein_coding protein_coding MGP_129S1SvImJ_T0085992.1 MGP_129S1SvImJ_G0032884.1 mouse_genomes_project 7 118306256 118307334 - Calca protein_coding retained_intron MGP_129S1SvImJ_T0085993.1 MGP_129S1SvImJ_G0032884.1 mouse_genomes_project 7 118307240 118310958 - MGP_129S1SvImJ_P0085993 Calca protein_coding protein_coding MGP_129S1SvImJ_T0085994.1 MGP_129S1SvImJ_G0032884.1 mouse_genomes_project 7 118307943 118310963 - MGP_129S1SvImJ_P0085994 Calca protein_coding protein_coding MGP_129S1SvImJ_T0085995.1 MGP_129S1SvImJ_G0032884.1 mouse_genomes_project 7 118308060 118310946 - MGP_129S1SvImJ_P0085995 Calca protein_coding protein_coding MGP_129S1SvImJ_T0085996.1 MGP_129S1SvImJ_G0032884.1 mouse_genomes_project 7 118308991 118310957 - MGP_129S1SvImJ_P0085996 Calca protein_coding protein_coding MGP_129S1SvImJ_T0085997.1 MGP_129S1SvImJ_G0032884.1 mouse_genomes_project 7 118309022 118310922 - MGP_129S1SvImJ_P0085997 Calca protein_coding protein_coding MGP_129S1SvImJ_T0008881.1 MGP_129S1SvImJ_G0007174.1 mouse_genomes_project 7 50541252 50542689 - Gm26856 lincRNA lincRNA MGP_129S1SvImJ_T0083700.1 MGP_129S1SvImJ_G0032188.1 mouse_genomes_project 7 45177439 45195432 - MGP_129S1SvImJ_P0083700 Cpt1c protein_coding protein_coding MGP_129S1SvImJ_T0015851.1 MGP_129S1SvImJ_G0013940.1 mouse_genomes_project 7 79068343 79068846 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102824.1 MGP_129S1SvImJ_G0040656.1 mouse_genomes_project 7 109094889 109862159 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0100050.1 MGP_129S1SvImJ_G0038117.1 mouse_genomes_project 7 37735156 37735214 - Gm22203 snRNA snRNA MGP_129S1SvImJ_T0083447.1 MGP_129S1SvImJ_G0032125.1 mouse_genomes_project 7 43458023 43471590 + MGP_129S1SvImJ_P0083447 Etfb protein_coding protein_coding MGP_129S1SvImJ_T0083448.1 MGP_129S1SvImJ_G0032125.1 mouse_genomes_project 7 43458059 43471454 + MGP_129S1SvImJ_P0083448 Etfb protein_coding protein_coding MGP_129S1SvImJ_T0083450.1 MGP_129S1SvImJ_G0032125.1 mouse_genomes_project 7 43458070 43470363 + MGP_129S1SvImJ_P0083450 Etfb protein_coding protein_coding MGP_129S1SvImJ_T0083452.1 MGP_129S1SvImJ_G0032125.1 mouse_genomes_project 7 43458090 43471571 + MGP_129S1SvImJ_P0083452 Etfb protein_coding protein_coding MGP_129S1SvImJ_T0083453.1 MGP_129S1SvImJ_G0032125.1 mouse_genomes_project 7 43466679 43471571 + MGP_129S1SvImJ_P0083453 Etfb protein_coding protein_coding MGP_129S1SvImJ_T0083454.1 MGP_129S1SvImJ_G0032125.1 mouse_genomes_project 7 43470290 43471570 + Etfb protein_coding processed_transcript MGP_129S1SvImJ_T0083455.1 MGP_129S1SvImJ_G0032125.1 mouse_genomes_project 7 43470825 43471573 + Etfb protein_coding processed_transcript MGP_129S1SvImJ_T0011715.1 MGP_129S1SvImJ_G0009831.1 mouse_genomes_project 7 126542165 126542434 + Gm26414 misc_RNA misc_RNA MGP_129S1SvImJ_T0015744.1 MGP_129S1SvImJ_G0013833.1 mouse_genomes_project 7 18011304 18012048 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002262.1 MGP_129S1SvImJ_G0002174.1 mouse_genomes_project 7 58608066 58610305 + TEC TEC MGP_129S1SvImJ_T0015926.1 MGP_129S1SvImJ_G0014015.1 mouse_genomes_project 7 132411134 132411290 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085920.1 MGP_129S1SvImJ_G0032865.1 mouse_genomes_project 7 115002710 115321270 - MGP_129S1SvImJ_P0085920 Galnt18 protein_coding protein_coding MGP_129S1SvImJ_T0085921.1 MGP_129S1SvImJ_G0032865.1 mouse_genomes_project 7 115002710 115321270 - MGP_129S1SvImJ_P0085921 Galnt18 protein_coding protein_coding MGP_129S1SvImJ_T0085264.1 MGP_129S1SvImJ_G0032581.1 mouse_genomes_project 7 104057393 104243286 + MGP_129S1SvImJ_P0085264 Fchsd2 protein_coding protein_coding MGP_129S1SvImJ_T0085265.1 MGP_129S1SvImJ_G0032581.1 mouse_genomes_project 7 104057394 104160075 + Fchsd2 protein_coding processed_transcript MGP_129S1SvImJ_T0085266.1 MGP_129S1SvImJ_G0032581.1 mouse_genomes_project 7 104057399 104243309 + MGP_129S1SvImJ_P0085266 Fchsd2 protein_coding protein_coding MGP_129S1SvImJ_T0085267.1 MGP_129S1SvImJ_G0032581.1 mouse_genomes_project 7 104057423 104155958 + Fchsd2 protein_coding retained_intron MGP_129S1SvImJ_T0085268.1 MGP_129S1SvImJ_G0032581.1 mouse_genomes_project 7 104057498 104146024 + Fchsd2 protein_coding processed_transcript MGP_129S1SvImJ_T0085269.1 MGP_129S1SvImJ_G0032581.1 mouse_genomes_project 7 104057500 104092662 + Fchsd2 protein_coding retained_intron MGP_129S1SvImJ_T0085270.1 MGP_129S1SvImJ_G0032581.1 mouse_genomes_project 7 104201293 104211402 + Fchsd2 protein_coding retained_intron MGP_129S1SvImJ_T0010848.1 MGP_129S1SvImJ_G0008964.1 mouse_genomes_project 7 97067 97136 + Mir295 miRNA miRNA MGP_129S1SvImJ_T0005335.1 MGP_129S1SvImJ_G0004524.1 mouse_genomes_project 7 148417181 148422759 - Gm28821 antisense antisense MGP_129S1SvImJ_T0086833.1 MGP_129S1SvImJ_G0033047.1 mouse_genomes_project 7 131969251 131976654 - MGP_129S1SvImJ_P0086833 Zfp629 protein_coding protein_coding MGP_129S1SvImJ_T0086834.1 MGP_129S1SvImJ_G0033047.1 mouse_genomes_project 7 131969251 131977493 - MGP_129S1SvImJ_P0086834 Zfp629 protein_coding protein_coding MGP_129S1SvImJ_T0086835.1 MGP_129S1SvImJ_G0033047.1 mouse_genomes_project 7 131969251 131977436 - MGP_129S1SvImJ_P0086835 Zfp629 protein_coding protein_coding MGP_129S1SvImJ_T0086836.1 MGP_129S1SvImJ_G0033047.1 mouse_genomes_project 7 131970675 131977088 - MGP_129S1SvImJ_P0086836 Zfp629 protein_coding protein_coding MGP_129S1SvImJ_T0086837.1 MGP_129S1SvImJ_G0033047.1 mouse_genomes_project 7 131970807 131977479 - MGP_129S1SvImJ_P0086837 Zfp629 protein_coding protein_coding MGP_129S1SvImJ_T0086838.1 MGP_129S1SvImJ_G0033047.1 mouse_genomes_project 7 131970976 131978018 - MGP_129S1SvImJ_P0086838 Zfp629 protein_coding protein_coding MGP_129S1SvImJ_T0086839.1 MGP_129S1SvImJ_G0033047.1 mouse_genomes_project 7 131974124 131976581 - MGP_129S1SvImJ_P0086839 Zfp629 protein_coding protein_coding MGP_129S1SvImJ_T0086840.1 MGP_129S1SvImJ_G0033047.1 mouse_genomes_project 7 131974204 131977421 - MGP_129S1SvImJ_P0086840 Zfp629 protein_coding protein_coding MGP_129S1SvImJ_T0086841.1 MGP_129S1SvImJ_G0033047.1 mouse_genomes_project 7 131974271 131976586 - MGP_129S1SvImJ_P0086841 Zfp629 protein_coding protein_coding MGP_129S1SvImJ_T0082512.1 MGP_129S1SvImJ_G0031913.1 mouse_genomes_project 7 26144475 26147894 + MGP_129S1SvImJ_P0082512 Sertad1 protein_coding protein_coding MGP_129S1SvImJ_T0082513.1 MGP_129S1SvImJ_G0031913.1 mouse_genomes_project 7 26144940 26147084 + MGP_129S1SvImJ_P0082513 Sertad1 protein_coding protein_coding MGP_129S1SvImJ_T0101305.1 MGP_129S1SvImJ_G0039372.1 mouse_genomes_project 7 44395933 44396023 + Snord88a snoRNA snoRNA MGP_129S1SvImJ_T0102737.1 MGP_129S1SvImJ_G0040569.1 mouse_genomes_project 7 40645098 40795517 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0015889.1 MGP_129S1SvImJ_G0013978.1 mouse_genomes_project 7 104195573 104196511 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002337.1 MGP_129S1SvImJ_G0002248.1 mouse_genomes_project 7 132283471 132284180 + TEC TEC MGP_129S1SvImJ_T0084843.1 MGP_129S1SvImJ_G0032456.1 mouse_genomes_project 7 86108399 86265908 - MGP_129S1SvImJ_P0084843 Cemip protein_coding protein_coding MGP_129S1SvImJ_T0084844.1 MGP_129S1SvImJ_G0032456.1 mouse_genomes_project 7 86110331 86119881 - Cemip protein_coding retained_intron MGP_129S1SvImJ_T0084845.1 MGP_129S1SvImJ_G0032456.1 mouse_genomes_project 7 86122071 86266100 - Cemip protein_coding retained_intron MGP_129S1SvImJ_T0084846.1 MGP_129S1SvImJ_G0032456.1 mouse_genomes_project 7 86126007 86154330 - Cemip protein_coding retained_intron MGP_129S1SvImJ_T0084847.1 MGP_129S1SvImJ_G0032456.1 mouse_genomes_project 7 86136314 86266100 - Cemip protein_coding retained_intron MGP_129S1SvImJ_T0081936.1 MGP_129S1SvImJ_G0031758.1 mouse_genomes_project 7 17047653 17051606 + MGP_129S1SvImJ_P0081936 Six5 protein_coding protein_coding MGP_129S1SvImJ_T0015780.1 MGP_129S1SvImJ_G0013869.1 mouse_genomes_project 7 34890314 34892577 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0086304.1 MGP_129S1SvImJ_G0032955.1 mouse_genomes_project 7 126297733 126302607 + MGP_129S1SvImJ_P0086304 Chp2 protein_coding protein_coding MGP_129S1SvImJ_T0086305.1 MGP_129S1SvImJ_G0032955.1 mouse_genomes_project 7 126301355 126301966 + Chp2 protein_coding processed_transcript MGP_129S1SvImJ_T0081971.1 MGP_129S1SvImJ_G0031770.1 mouse_genomes_project 7 17297479 17304801 - MGP_129S1SvImJ_P0081971 Fosb protein_coding protein_coding MGP_129S1SvImJ_T0002220.1 MGP_129S1SvImJ_G0002132.1 mouse_genomes_project 7 14840382 14841286 + TEC TEC MGP_129S1SvImJ_T0085715.1 MGP_129S1SvImJ_G0032767.1 mouse_genomes_project 7 109473753 109533628 - MGP_129S1SvImJ_P0085715 protein_coding protein_coding MGP_129S1SvImJ_T0085716.1 MGP_129S1SvImJ_G0032767.1 mouse_genomes_project 7 109494879 109533614 - protein_coding processed_transcript MGP_129S1SvImJ_T0102771.1 MGP_129S1SvImJ_G0040603.1 mouse_genomes_project 7 87058673 87062529 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0100070.1 MGP_129S1SvImJ_G0038137.1 mouse_genomes_project 7 93726892 93726995 + Gm24552 snRNA snRNA MGP_129S1SvImJ_T0087393.1 MGP_129S1SvImJ_G0033170.1 mouse_genomes_project 7 145297632 145298690 - MGP_129S1SvImJ_P0087393 Olfr524 protein_coding protein_coding MGP_129S1SvImJ_T0086564.1 MGP_129S1SvImJ_G0032997.1 mouse_genomes_project 7 131075314 131078874 + MGP_129S1SvImJ_P0086564 Ypel3 protein_coding protein_coding MGP_129S1SvImJ_T0086565.1 MGP_129S1SvImJ_G0032997.1 mouse_genomes_project 7 131075334 131078871 + MGP_129S1SvImJ_P0086565 Ypel3 protein_coding protein_coding MGP_129S1SvImJ_T0086566.1 MGP_129S1SvImJ_G0032997.1 mouse_genomes_project 7 131075337 131076461 + MGP_129S1SvImJ_P0086566 Ypel3 protein_coding protein_coding MGP_129S1SvImJ_T0086567.1 MGP_129S1SvImJ_G0032997.1 mouse_genomes_project 7 131075358 131076786 + Ypel3 protein_coding processed_transcript MGP_129S1SvImJ_T0086568.1 MGP_129S1SvImJ_G0032997.1 mouse_genomes_project 7 131075358 131078873 + Ypel3 protein_coding processed_transcript MGP_129S1SvImJ_T0086569.1 MGP_129S1SvImJ_G0032997.1 mouse_genomes_project 7 131075360 131078874 + MGP_129S1SvImJ_P0086569 Ypel3 protein_coding protein_coding MGP_129S1SvImJ_T0086570.1 MGP_129S1SvImJ_G0032997.1 mouse_genomes_project 7 131075364 131078425 + MGP_129S1SvImJ_P0086570 Ypel3 protein_coding protein_coding MGP_129S1SvImJ_T0086571.1 MGP_129S1SvImJ_G0032997.1 mouse_genomes_project 7 131075506 131076234 + MGP_129S1SvImJ_P0086571 Ypel3 protein_coding protein_coding MGP_129S1SvImJ_T0086572.1 MGP_129S1SvImJ_G0032997.1 mouse_genomes_project 7 131075572 131078806 + MGP_129S1SvImJ_P0086572 Ypel3 protein_coding protein_coding MGP_129S1SvImJ_T0086573.1 MGP_129S1SvImJ_G0032997.1 mouse_genomes_project 7 131075867 131078591 + Ypel3 protein_coding processed_transcript MGP_129S1SvImJ_T0086574.1 MGP_129S1SvImJ_G0032997.1 mouse_genomes_project 7 131075940 131076653 + Ypel3 protein_coding retained_intron MGP_129S1SvImJ_T0083631.1 MGP_129S1SvImJ_G0032175.1 mouse_genomes_project 7 44902949 44914273 + MGP_129S1SvImJ_P0083631 Izumo2 protein_coding protein_coding MGP_129S1SvImJ_T0018445.1 MGP_129S1SvImJ_G0015688.1 mouse_genomes_project 7 128127633 128137446 - Gm26974 processed_transcript lincRNA MGP_129S1SvImJ_T0018446.1 MGP_129S1SvImJ_G0015688.1 mouse_genomes_project 7 128135076 128137060 - Gm26974 processed_transcript lincRNA MGP_129S1SvImJ_T0018447.1 MGP_129S1SvImJ_G0015688.1 mouse_genomes_project 7 128135078 128136564 - Gm26974 processed_transcript retained_intron MGP_129S1SvImJ_T0005180.1 MGP_129S1SvImJ_G0004413.1 mouse_genomes_project 7 17234628 17235876 + 1700058P15Rik antisense antisense MGP_129S1SvImJ_T0087009.1 MGP_129S1SvImJ_G0033082.1 mouse_genomes_project 7 132795811 132846834 - MGP_129S1SvImJ_P0087009 Rgs10 protein_coding protein_coding MGP_129S1SvImJ_T0087010.1 MGP_129S1SvImJ_G0033082.1 mouse_genomes_project 7 132796075 132816393 - Rgs10 protein_coding processed_transcript MGP_129S1SvImJ_T0087011.1 MGP_129S1SvImJ_G0033082.1 mouse_genomes_project 7 132796191 132798470 - Rgs10 protein_coding processed_transcript MGP_129S1SvImJ_T0087012.1 MGP_129S1SvImJ_G0033082.1 mouse_genomes_project 7 132811537 132831138 - Rgs10 protein_coding retained_intron MGP_129S1SvImJ_T0087013.1 MGP_129S1SvImJ_G0033082.1 mouse_genomes_project 7 132829570 132846824 - MGP_129S1SvImJ_P0087013 Rgs10 protein_coding protein_coding MGP_129S1SvImJ_T0087014.1 MGP_129S1SvImJ_G0033082.1 mouse_genomes_project 7 132829841 132847419 - MGP_129S1SvImJ_P0087014 Rgs10 protein_coding protein_coding MGP_129S1SvImJ_T0082350.1 MGP_129S1SvImJ_G0031873.1 mouse_genomes_project 7 24165800 24174669 + MGP_129S1SvImJ_P0082350 Exosc5 protein_coding protein_coding MGP_129S1SvImJ_T0082351.1 MGP_129S1SvImJ_G0031873.1 mouse_genomes_project 7 24165827 24177992 + MGP_129S1SvImJ_P0082351 Exosc5 protein_coding protein_coding MGP_129S1SvImJ_T0082352.1 MGP_129S1SvImJ_G0031873.1 mouse_genomes_project 7 24165848 24174669 + Exosc5 protein_coding retained_intron MGP_129S1SvImJ_T0082353.1 MGP_129S1SvImJ_G0031873.1 mouse_genomes_project 7 24165848 24172943 + MGP_129S1SvImJ_P0082353 Exosc5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082354.1 MGP_129S1SvImJ_G0031873.1 mouse_genomes_project 7 24165854 24171038 + MGP_129S1SvImJ_P0082354 Exosc5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082355.1 MGP_129S1SvImJ_G0031873.1 mouse_genomes_project 7 24171023 24173411 + Exosc5 protein_coding retained_intron MGP_129S1SvImJ_T0085751.1 MGP_129S1SvImJ_G0032796.1 mouse_genomes_project 7 110902089 110929909 + MGP_129S1SvImJ_P0085751 Olfml1 protein_coding protein_coding MGP_129S1SvImJ_T0082853.1 MGP_129S1SvImJ_G0032002.1 mouse_genomes_project 7 29136011 29144782 - MGP_129S1SvImJ_P0082853 Zfp146 protein_coding protein_coding MGP_129S1SvImJ_T0082854.1 MGP_129S1SvImJ_G0032002.1 mouse_genomes_project 7 29137461 29138111 - Zfp146 protein_coding processed_transcript MGP_129S1SvImJ_T0010954.1 MGP_129S1SvImJ_G0009070.1 mouse_genomes_project 7 146398967 146399077 - Mir210 miRNA miRNA MGP_129S1SvImJ_T0082755.1 MGP_129S1SvImJ_G0031977.1 mouse_genomes_project 7 28130172 28141790 - MGP_129S1SvImJ_P0082755 Kcnk6 protein_coding protein_coding MGP_129S1SvImJ_T0015694.1 MGP_129S1SvImJ_G0013783.1 mouse_genomes_project 7 489608 489909 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082182.1 MGP_129S1SvImJ_G0031834.1 mouse_genomes_project 7 22874786 22904311 + MGP_129S1SvImJ_P0082182 Xrcc1 protein_coding protein_coding MGP_129S1SvImJ_T0082183.1 MGP_129S1SvImJ_G0031834.1 mouse_genomes_project 7 22875647 22904314 + MGP_129S1SvImJ_P0082183 Xrcc1 protein_coding protein_coding MGP_129S1SvImJ_T0082184.1 MGP_129S1SvImJ_G0031834.1 mouse_genomes_project 7 22875695 22890943 + Xrcc1 protein_coding retained_intron MGP_129S1SvImJ_T0082185.1 MGP_129S1SvImJ_G0031834.1 mouse_genomes_project 7 22875698 22880756 + Xrcc1 protein_coding processed_transcript MGP_129S1SvImJ_T0082186.1 MGP_129S1SvImJ_G0031834.1 mouse_genomes_project 7 22875782 22877039 + Xrcc1 protein_coding retained_intron MGP_129S1SvImJ_T0082187.1 MGP_129S1SvImJ_G0031834.1 mouse_genomes_project 7 22875830 22897229 + Xrcc1 protein_coding retained_intron MGP_129S1SvImJ_T0082188.1 MGP_129S1SvImJ_G0031834.1 mouse_genomes_project 7 22895858 22897830 + Xrcc1 protein_coding retained_intron MGP_129S1SvImJ_T0082189.1 MGP_129S1SvImJ_G0031834.1 mouse_genomes_project 7 22897651 22901568 + Xrcc1 protein_coding retained_intron MGP_129S1SvImJ_T0082190.1 MGP_129S1SvImJ_G0031834.1 mouse_genomes_project 7 22899991 22901586 + Xrcc1 protein_coding retained_intron MGP_129S1SvImJ_T0082191.1 MGP_129S1SvImJ_G0031834.1 mouse_genomes_project 7 22900146 22901802 + Xrcc1 protein_coding retained_intron MGP_129S1SvImJ_T0082192.1 MGP_129S1SvImJ_G0031834.1 mouse_genomes_project 7 22901405 22904316 + Xrcc1 protein_coding processed_transcript MGP_129S1SvImJ_T0082193.1 MGP_129S1SvImJ_G0031834.1 mouse_genomes_project 7 22902589 22904310 + Xrcc1 protein_coding retained_intron MGP_129S1SvImJ_T0082194.1 MGP_129S1SvImJ_G0031834.1 mouse_genomes_project 7 22903101 22904310 + Xrcc1 protein_coding processed_transcript MGP_129S1SvImJ_T0009041.1 MGP_129S1SvImJ_G0007277.1 mouse_genomes_project 7 132057426 132070211 + Gm44514 lincRNA lincRNA MGP_129S1SvImJ_T0009042.1 MGP_129S1SvImJ_G0007277.1 mouse_genomes_project 7 132065904 132070821 + Gm44514 lincRNA lincRNA MGP_129S1SvImJ_T0085087.1 MGP_129S1SvImJ_G0032536.1 mouse_genomes_project 7 100920426 100927490 - MGP_129S1SvImJ_P0085087 B3gnt6 protein_coding protein_coding MGP_129S1SvImJ_T0018364.1 MGP_129S1SvImJ_G0015656.1 mouse_genomes_project 7 23222184 23245536 + Gm5893 processed_transcript lincRNA MGP_129S1SvImJ_T0018365.1 MGP_129S1SvImJ_G0015656.1 mouse_genomes_project 7 23222184 23245519 + Gm5893 processed_transcript processed_transcript MGP_129S1SvImJ_T0018366.1 MGP_129S1SvImJ_G0015656.1 mouse_genomes_project 7 23225498 23229262 + Gm5893 processed_transcript retained_intron MGP_129S1SvImJ_T0018367.1 MGP_129S1SvImJ_G0015656.1 mouse_genomes_project 7 23231674 23245534 + Gm5893 processed_transcript retained_intron MGP_129S1SvImJ_T0085752.1 MGP_129S1SvImJ_G0032797.1 mouse_genomes_project 7 110933830 111086323 + MGP_129S1SvImJ_P0085752 Ppfibp2 protein_coding protein_coding MGP_129S1SvImJ_T0085753.1 MGP_129S1SvImJ_G0032797.1 mouse_genomes_project 7 110945402 111090011 + MGP_129S1SvImJ_P0085753 Ppfibp2 protein_coding protein_coding MGP_129S1SvImJ_T0083521.1 MGP_129S1SvImJ_G0032154.1 mouse_genomes_project 7 44373395 44381921 - MGP_129S1SvImJ_P0083521 protein_coding protein_coding MGP_129S1SvImJ_T0101313.1 MGP_129S1SvImJ_G0039380.1 mouse_genomes_project 7 58857723 58857857 + Gm23911 snoRNA snoRNA MGP_129S1SvImJ_T0015747.1 MGP_129S1SvImJ_G0013836.1 mouse_genomes_project 7 22632281 22632680 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0008850.1 MGP_129S1SvImJ_G0007153.1 mouse_genomes_project 7 36626001 36629368 - Gm28076 lincRNA lincRNA MGP_129S1SvImJ_T0087260.1 MGP_129S1SvImJ_G0033133.1 mouse_genomes_project 7 140265526 140268775 + MGP_129S1SvImJ_P0087260 Foxi2 protein_coding protein_coding MGP_129S1SvImJ_T0101981.1 MGP_129S1SvImJ_G0039853.1 mouse_genomes_project 7 43968846 43973339 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101982.1 MGP_129S1SvImJ_G0039853.1 mouse_genomes_project 7 43970649 43974466 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0087213.1 MGP_129S1SvImJ_G0033122.1 mouse_genomes_project 7 138431290 138437072 - Mmp21 protein_coding retained_intron MGP_129S1SvImJ_T0087214.1 MGP_129S1SvImJ_G0033122.1 mouse_genomes_project 7 138431290 138437072 - MGP_129S1SvImJ_P0087214 Mmp21 protein_coding protein_coding MGP_129S1SvImJ_T0087215.1 MGP_129S1SvImJ_G0033122.1 mouse_genomes_project 7 138431376 138437072 - MGP_129S1SvImJ_P0087215 Mmp21 protein_coding protein_coding MGP_129S1SvImJ_T0087256.1 MGP_129S1SvImJ_G0033129.1 mouse_genomes_project 7 139480544 140011522 + MGP_129S1SvImJ_P0087256 Dock1 protein_coding protein_coding MGP_129S1SvImJ_T0085731.1 MGP_129S1SvImJ_G0032781.1 mouse_genomes_project 7 110252202 110253474 - MGP_129S1SvImJ_P0085731 protein_coding protein_coding MGP_129S1SvImJ_T0082399.1 MGP_129S1SvImJ_G0031882.1 mouse_genomes_project 7 24484282 24722670 + MGP_129S1SvImJ_P0082399 protein_coding protein_coding MGP_129S1SvImJ_T0083810.1 MGP_129S1SvImJ_G0032224.1 mouse_genomes_project 7 45727313 45732515 - MGP_129S1SvImJ_P0083810 Bax protein_coding protein_coding MGP_129S1SvImJ_T0102675.1 MGP_129S1SvImJ_G0040508.1 mouse_genomes_project 7 9008071 9008993 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0005660.1 MGP_129S1SvImJ_G0004767.1 mouse_genomes_project 7 120183864 120184615 + AV356131 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0086125.1 MGP_129S1SvImJ_G0032905.1 mouse_genomes_project 7 122722766 122737402 - MGP_129S1SvImJ_P0086125 Knop1 protein_coding protein_coding MGP_129S1SvImJ_T0086126.1 MGP_129S1SvImJ_G0032905.1 mouse_genomes_project 7 122722766 122737402 - MGP_129S1SvImJ_P0086126 Knop1 protein_coding protein_coding MGP_129S1SvImJ_T0086127.1 MGP_129S1SvImJ_G0032905.1 mouse_genomes_project 7 122722781 122737405 - MGP_129S1SvImJ_P0086127 Knop1 protein_coding protein_coding MGP_129S1SvImJ_T0086128.1 MGP_129S1SvImJ_G0032905.1 mouse_genomes_project 7 122724327 122737088 - MGP_129S1SvImJ_P0086128 Knop1 protein_coding protein_coding MGP_129S1SvImJ_T0086129.1 MGP_129S1SvImJ_G0032905.1 mouse_genomes_project 7 122726026 122737006 - MGP_129S1SvImJ_P0086129 Knop1 protein_coding protein_coding MGP_129S1SvImJ_T0086130.1 MGP_129S1SvImJ_G0032905.1 mouse_genomes_project 7 122726290 122737658 - MGP_129S1SvImJ_P0086130 Knop1 protein_coding protein_coding MGP_129S1SvImJ_T0086131.1 MGP_129S1SvImJ_G0032905.1 mouse_genomes_project 7 122733209 122734732 - MGP_129S1SvImJ_P0086131 Knop1 protein_coding protein_coding MGP_129S1SvImJ_T0085588.1 MGP_129S1SvImJ_G0032727.1 mouse_genomes_project 7 107820628 107821592 + MGP_129S1SvImJ_P0085588 Olfr661 protein_coding protein_coding MGP_129S1SvImJ_T0085478.1 MGP_129S1SvImJ_G0032648.1 mouse_genomes_project 7 106339971 106350243 - MGP_129S1SvImJ_P0085478 protein_coding protein_coding MGP_129S1SvImJ_T0085480.1 MGP_129S1SvImJ_G0032648.1 mouse_genomes_project 7 106340659 106343254 - MGP_129S1SvImJ_P0085480 protein_coding protein_coding MGP_129S1SvImJ_T0083296.1 MGP_129S1SvImJ_G0032089.1 mouse_genomes_project 7 34841649 34858943 + MGP_129S1SvImJ_P0083296 Slc7a9 protein_coding protein_coding MGP_129S1SvImJ_T0083297.1 MGP_129S1SvImJ_G0032089.1 mouse_genomes_project 7 34841890 34858943 + MGP_129S1SvImJ_P0083297 Slc7a9 protein_coding protein_coding MGP_129S1SvImJ_T0083298.1 MGP_129S1SvImJ_G0032089.1 mouse_genomes_project 7 34841951 34842924 + Slc7a9 protein_coding retained_intron MGP_129S1SvImJ_T0083299.1 MGP_129S1SvImJ_G0032089.1 mouse_genomes_project 7 34841953 34858910 + Slc7a9 protein_coding retained_intron MGP_129S1SvImJ_T0083300.1 MGP_129S1SvImJ_G0032089.1 mouse_genomes_project 7 34842023 34858943 + MGP_129S1SvImJ_P0083300 Slc7a9 protein_coding protein_coding MGP_129S1SvImJ_T0083301.1 MGP_129S1SvImJ_G0032089.1 mouse_genomes_project 7 34842689 34848426 + MGP_129S1SvImJ_P0083301 Slc7a9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0098378.1 MGP_129S1SvImJ_G0036463.1 mouse_genomes_project 7 63194669 63199016 - pseudogene pseudogene MGP_129S1SvImJ_T0081613.1 MGP_129S1SvImJ_G0031657.1 mouse_genomes_project 7 10325400 10329057 + MGP_129S1SvImJ_P0081613 Rnf225 protein_coding protein_coding MGP_129S1SvImJ_T0085402.1 MGP_129S1SvImJ_G0032603.1 mouse_genomes_project 7 105142098 105147498 - MGP_129S1SvImJ_P0085402 Chrna10 protein_coding protein_coding MGP_129S1SvImJ_T0085552.1 MGP_129S1SvImJ_G0032710.1 mouse_genomes_project 7 107470636 107486842 + MGP_129S1SvImJ_P0085552 protein_coding protein_coding MGP_129S1SvImJ_T0085553.1 MGP_129S1SvImJ_G0032710.1 mouse_genomes_project 7 107470638 107486842 + MGP_129S1SvImJ_P0085553 protein_coding protein_coding MGP_129S1SvImJ_T0085555.1 MGP_129S1SvImJ_G0032710.1 mouse_genomes_project 7 107470734 107489835 + MGP_129S1SvImJ_P0085555 protein_coding protein_coding MGP_129S1SvImJ_T0085556.1 MGP_129S1SvImJ_G0032710.1 mouse_genomes_project 7 107470743 107486107 + MGP_129S1SvImJ_P0085556 protein_coding protein_coding MGP_129S1SvImJ_T0085461.1 MGP_129S1SvImJ_G0032633.1 mouse_genomes_project 7 106015674 106016715 + MGP_129S1SvImJ_P0085461 Olfr574 protein_coding protein_coding MGP_129S1SvImJ_T0098386.1 MGP_129S1SvImJ_G0036471.1 mouse_genomes_project 7 116566648 116568075 + pseudogene pseudogene MGP_129S1SvImJ_T0081782.1 MGP_129S1SvImJ_G0031710.1 mouse_genomes_project 7 14165166 14167883 + MGP_129S1SvImJ_P0081782 Tmem160 protein_coding protein_coding MGP_129S1SvImJ_T0008976.1 MGP_129S1SvImJ_G0007238.1 mouse_genomes_project 7 96572463 96895779 + lincRNA lincRNA MGP_129S1SvImJ_T0008977.1 MGP_129S1SvImJ_G0007238.1 mouse_genomes_project 7 96572524 97282871 + lincRNA lincRNA MGP_129S1SvImJ_T0085120.1 MGP_129S1SvImJ_G0032542.1 mouse_genomes_project 7 101449040 101463979 + MGP_129S1SvImJ_P0085120 Prkrir protein_coding protein_coding MGP_129S1SvImJ_T0085121.1 MGP_129S1SvImJ_G0032542.1 mouse_genomes_project 7 101449040 101461284 + MGP_129S1SvImJ_P0085121 Prkrir protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085122.1 MGP_129S1SvImJ_G0032542.1 mouse_genomes_project 7 101449265 101461030 + MGP_129S1SvImJ_P0085122 Prkrir protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085123.1 MGP_129S1SvImJ_G0032542.1 mouse_genomes_project 7 101455793 101461174 + Prkrir protein_coding processed_transcript MGP_129S1SvImJ_T0085452.1 MGP_129S1SvImJ_G0032625.1 mouse_genomes_project 7 105813603 105832350 - MGP_129S1SvImJ_P0085452 Olfr78 protein_coding protein_coding MGP_129S1SvImJ_T0085453.1 MGP_129S1SvImJ_G0032625.1 mouse_genomes_project 7 105813603 105832350 - MGP_129S1SvImJ_P0085453 Olfr78 protein_coding protein_coding MGP_129S1SvImJ_T0082708.1 MGP_129S1SvImJ_G0031967.1 mouse_genomes_project 7 27771018 27846967 - MGP_129S1SvImJ_P0082708 Actn4 protein_coding protein_coding MGP_129S1SvImJ_T0082709.1 MGP_129S1SvImJ_G0031967.1 mouse_genomes_project 7 27771423 27785156 - Actn4 protein_coding processed_transcript MGP_129S1SvImJ_T0082710.1 MGP_129S1SvImJ_G0031967.1 mouse_genomes_project 7 27772002 27772623 - Actn4 protein_coding retained_intron MGP_129S1SvImJ_T0082711.1 MGP_129S1SvImJ_G0031967.1 mouse_genomes_project 7 27773412 27774802 - Actn4 protein_coding retained_intron MGP_129S1SvImJ_T0082712.1 MGP_129S1SvImJ_G0031967.1 mouse_genomes_project 7 27776390 27846850 - MGP_129S1SvImJ_P0082712 Actn4 protein_coding protein_coding MGP_129S1SvImJ_T0082713.1 MGP_129S1SvImJ_G0031967.1 mouse_genomes_project 7 27779685 27785457 - Actn4 protein_coding processed_transcript MGP_129S1SvImJ_T0082714.1 MGP_129S1SvImJ_G0031967.1 mouse_genomes_project 7 27784784 27796996 - MGP_129S1SvImJ_P0082714 Actn4 protein_coding protein_coding MGP_129S1SvImJ_T0082715.1 MGP_129S1SvImJ_G0031967.1 mouse_genomes_project 7 27791152 27831126 - MGP_129S1SvImJ_P0082715 Actn4 protein_coding protein_coding MGP_129S1SvImJ_T0081647.1 MGP_129S1SvImJ_G0031665.1 mouse_genomes_project 7 10451749 10461610 - MGP_129S1SvImJ_P0081647 Mzf1 protein_coding protein_coding MGP_129S1SvImJ_T0081648.1 MGP_129S1SvImJ_G0031665.1 mouse_genomes_project 7 10451753 10462153 - MGP_129S1SvImJ_P0081648 Mzf1 protein_coding protein_coding MGP_129S1SvImJ_T0081649.1 MGP_129S1SvImJ_G0031665.1 mouse_genomes_project 7 10451755 10462810 - Mzf1 protein_coding retained_intron MGP_129S1SvImJ_T0081650.1 MGP_129S1SvImJ_G0031665.1 mouse_genomes_project 7 10456944 10463187 - Mzf1 protein_coding retained_intron MGP_129S1SvImJ_T0086196.1 MGP_129S1SvImJ_G0032927.1 mouse_genomes_project 7 124166365 124217860 + Abca14 protein_coding processed_transcript MGP_129S1SvImJ_T0086197.1 MGP_129S1SvImJ_G0032927.1 mouse_genomes_project 7 124166368 124288438 + MGP_129S1SvImJ_P0086197 Abca14 protein_coding protein_coding MGP_129S1SvImJ_T0086198.1 MGP_129S1SvImJ_G0032927.1 mouse_genomes_project 7 124166408 124176347 + Abca14 protein_coding retained_intron MGP_129S1SvImJ_T0086199.1 MGP_129S1SvImJ_G0032927.1 mouse_genomes_project 7 124166411 124179655 + Abca14 protein_coding processed_transcript MGP_129S1SvImJ_T0084972.1 MGP_129S1SvImJ_G0032512.1 mouse_genomes_project 7 95140447 95189680 - MGP_129S1SvImJ_P0084972 Ankrd42 protein_coding protein_coding MGP_129S1SvImJ_T0084973.1 MGP_129S1SvImJ_G0032512.1 mouse_genomes_project 7 95142907 95189720 - MGP_129S1SvImJ_P0084973 Ankrd42 protein_coding protein_coding MGP_129S1SvImJ_T0084974.1 MGP_129S1SvImJ_G0032512.1 mouse_genomes_project 7 95142923 95189714 - MGP_129S1SvImJ_P0084974 Ankrd42 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084975.1 MGP_129S1SvImJ_G0032512.1 mouse_genomes_project 7 95156594 95161697 - Ankrd42 protein_coding retained_intron MGP_129S1SvImJ_T0084976.1 MGP_129S1SvImJ_G0032512.1 mouse_genomes_project 7 95160502 95189613 - Ankrd42 protein_coding retained_intron MGP_129S1SvImJ_T0084977.1 MGP_129S1SvImJ_G0032512.1 mouse_genomes_project 7 95160754 95189708 - Ankrd42 protein_coding processed_transcript MGP_129S1SvImJ_T0015733.1 MGP_129S1SvImJ_G0013822.1 mouse_genomes_project 7 14235576 14236315 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0085492.1 MGP_129S1SvImJ_G0032661.1 mouse_genomes_project 7 106612768 106613719 + MGP_129S1SvImJ_P0085492 Olfr608 protein_coding protein_coding MGP_129S1SvImJ_T0086234.1 MGP_129S1SvImJ_G0032935.1 mouse_genomes_project 7 124932782 124961759 + MGP_129S1SvImJ_P0086234 Polr3e protein_coding protein_coding MGP_129S1SvImJ_T0086235.1 MGP_129S1SvImJ_G0032935.1 mouse_genomes_project 7 124932782 124961759 + MGP_129S1SvImJ_P0086235 Polr3e protein_coding protein_coding MGP_129S1SvImJ_T0082113.1 MGP_129S1SvImJ_G0031816.1 mouse_genomes_project 7 22410903 22414006 + Zfp235 protein_coding retained_intron MGP_129S1SvImJ_T0082114.1 MGP_129S1SvImJ_G0031816.1 mouse_genomes_project 7 22410908 22414809 + Zfp235 protein_coding processed_transcript MGP_129S1SvImJ_T0082115.1 MGP_129S1SvImJ_G0031816.1 mouse_genomes_project 7 22410930 22421688 + MGP_129S1SvImJ_P0082115 Zfp235 protein_coding protein_coding MGP_129S1SvImJ_T0082116.1 MGP_129S1SvImJ_G0031816.1 mouse_genomes_project 7 22410941 22413383 + Zfp235 protein_coding retained_intron MGP_129S1SvImJ_T0082117.1 MGP_129S1SvImJ_G0031816.1 mouse_genomes_project 7 22410962 22414813 + Zfp235 protein_coding processed_transcript MGP_129S1SvImJ_T0082118.1 MGP_129S1SvImJ_G0031816.1 mouse_genomes_project 7 22410976 22424006 + MGP_129S1SvImJ_P0082118 Zfp235 protein_coding protein_coding MGP_129S1SvImJ_T0010948.1 MGP_129S1SvImJ_G0009064.1 mouse_genomes_project 7 138706410 138706521 - Gm23631 miRNA miRNA MGP_129S1SvImJ_T0085468.1 MGP_129S1SvImJ_G0032639.1 mouse_genomes_project 7 106125192 106136996 + MGP_129S1SvImJ_P0085468 protein_coding protein_coding MGP_129S1SvImJ_T0085821.1 MGP_129S1SvImJ_G0032843.1 mouse_genomes_project 7 112952309 113048825 - MGP_129S1SvImJ_P0085821 St5 protein_coding protein_coding MGP_129S1SvImJ_T0085822.1 MGP_129S1SvImJ_G0032843.1 mouse_genomes_project 7 112952312 113000024 - MGP_129S1SvImJ_P0085822 St5 protein_coding protein_coding MGP_129S1SvImJ_T0085823.1 MGP_129S1SvImJ_G0032843.1 mouse_genomes_project 7 112952318 113048246 - MGP_129S1SvImJ_P0085823 St5 protein_coding protein_coding MGP_129S1SvImJ_T0083009.1 MGP_129S1SvImJ_G0032032.1 mouse_genomes_project 7 29598242 29601504 - MGP_129S1SvImJ_P0083009 Zbtb32 protein_coding protein_coding MGP_129S1SvImJ_T0083010.1 MGP_129S1SvImJ_G0032032.1 mouse_genomes_project 7 29598244 29607438 - MGP_129S1SvImJ_P0083010 Zbtb32 protein_coding protein_coding MGP_129S1SvImJ_T0083011.1 MGP_129S1SvImJ_G0032032.1 mouse_genomes_project 7 29606500 29607478 - Zbtb32 protein_coding processed_transcript MGP_129S1SvImJ_T0101303.1 MGP_129S1SvImJ_G0039370.1 mouse_genomes_project 7 44393888 44393979 + Gm26247 snoRNA snoRNA MGP_129S1SvImJ_T0084704.1 MGP_129S1SvImJ_G0032419.1 mouse_genomes_project 7 82869424 82883387 + MGP_129S1SvImJ_P0084704 Zscan2 protein_coding protein_coding MGP_129S1SvImJ_T0084705.1 MGP_129S1SvImJ_G0032419.1 mouse_genomes_project 7 82869455 82871921 + MGP_129S1SvImJ_P0084705 Zscan2 protein_coding protein_coding MGP_129S1SvImJ_T0084706.1 MGP_129S1SvImJ_G0032419.1 mouse_genomes_project 7 82869457 82884306 + MGP_129S1SvImJ_P0084706 Zscan2 protein_coding protein_coding MGP_129S1SvImJ_T0084707.1 MGP_129S1SvImJ_G0032419.1 mouse_genomes_project 7 82870612 82884955 + MGP_129S1SvImJ_P0084707 Zscan2 protein_coding protein_coding MGP_129S1SvImJ_T0084708.1 MGP_129S1SvImJ_G0032419.1 mouse_genomes_project 7 82871382 82883516 + MGP_129S1SvImJ_P0084708 Zscan2 protein_coding protein_coding MGP_129S1SvImJ_T0087172.1 MGP_129S1SvImJ_G0033116.1 mouse_genomes_project 7 137535149 137561622 - MGP_129S1SvImJ_P0087172 Mettl10 protein_coding protein_coding MGP_129S1SvImJ_T0087173.1 MGP_129S1SvImJ_G0033116.1 mouse_genomes_project 7 137535301 137561565 - MGP_129S1SvImJ_P0087173 Mettl10 protein_coding protein_coding MGP_129S1SvImJ_T0087174.1 MGP_129S1SvImJ_G0033116.1 mouse_genomes_project 7 137535473 137561328 - Mettl10 protein_coding processed_transcript MGP_129S1SvImJ_T0087175.1 MGP_129S1SvImJ_G0033116.1 mouse_genomes_project 7 137539053 137561564 - MGP_129S1SvImJ_P0087175 Mettl10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087176.1 MGP_129S1SvImJ_G0033116.1 mouse_genomes_project 7 137539061 137561534 - MGP_129S1SvImJ_P0087176 Mettl10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087177.1 MGP_129S1SvImJ_G0033116.1 mouse_genomes_project 7 137559054 137561588 - Mettl10 protein_coding processed_transcript MGP_129S1SvImJ_T0085598.1 MGP_129S1SvImJ_G0032736.1 mouse_genomes_project 7 108240587 108241541 + MGP_129S1SvImJ_P0085598 Olfr676 protein_coding protein_coding MGP_129S1SvImJ_T0083722.1 MGP_129S1SvImJ_G0032202.1 mouse_genomes_project 7 45366466 45371701 - MGP_129S1SvImJ_P0083722 protein_coding protein_coding MGP_129S1SvImJ_T0081858.1 MGP_129S1SvImJ_G0031729.1 mouse_genomes_project 7 14853141 14883646 + Psg16 protein_coding retained_intron MGP_129S1SvImJ_T0081859.1 MGP_129S1SvImJ_G0031729.1 mouse_genomes_project 7 14875209 14881140 + MGP_129S1SvImJ_P0081859 Psg16 protein_coding protein_coding MGP_129S1SvImJ_T0081860.1 MGP_129S1SvImJ_G0031729.1 mouse_genomes_project 7 14877623 14889339 + MGP_129S1SvImJ_P0081860 Psg16 protein_coding protein_coding MGP_129S1SvImJ_T0083926.1 MGP_129S1SvImJ_G0032254.1 mouse_genomes_project 7 46222844 46243798 + MGP_129S1SvImJ_P0083926 Tmem143 protein_coding protein_coding MGP_129S1SvImJ_T0083927.1 MGP_129S1SvImJ_G0032254.1 mouse_genomes_project 7 46222984 46243798 + MGP_129S1SvImJ_P0083927 Tmem143 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083928.1 MGP_129S1SvImJ_G0032254.1 mouse_genomes_project 7 46223004 46243794 + MGP_129S1SvImJ_P0083928 Tmem143 protein_coding protein_coding MGP_129S1SvImJ_T0083929.1 MGP_129S1SvImJ_G0032254.1 mouse_genomes_project 7 46223323 46227989 + Tmem143 protein_coding retained_intron MGP_129S1SvImJ_T0083930.1 MGP_129S1SvImJ_G0032254.1 mouse_genomes_project 7 46223326 46234596 + Tmem143 protein_coding processed_transcript MGP_129S1SvImJ_T0083931.1 MGP_129S1SvImJ_G0032254.1 mouse_genomes_project 7 46223332 46233844 + Tmem143 protein_coding retained_intron MGP_129S1SvImJ_T0083932.1 MGP_129S1SvImJ_G0032254.1 mouse_genomes_project 7 46223332 46235905 + MGP_129S1SvImJ_P0083932 Tmem143 protein_coding protein_coding MGP_129S1SvImJ_T0083933.1 MGP_129S1SvImJ_G0032254.1 mouse_genomes_project 7 46235244 46235847 + Tmem143 protein_coding processed_transcript MGP_129S1SvImJ_T0083934.1 MGP_129S1SvImJ_G0032254.1 mouse_genomes_project 7 46242382 46243360 + Tmem143 protein_coding processed_transcript MGP_129S1SvImJ_T0015803.1 MGP_129S1SvImJ_G0013892.1 mouse_genomes_project 7 43397097 43397362 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082927.1 MGP_129S1SvImJ_G0032020.1 mouse_genomes_project 7 29422927 29438326 - MGP_129S1SvImJ_P0082927 Aplp1 protein_coding protein_coding MGP_129S1SvImJ_T0101326.1 MGP_129S1SvImJ_G0039393.1 mouse_genomes_project 7 68828794 68828931 - Gm23233 snoRNA snoRNA MGP_129S1SvImJ_T0015774.1 MGP_129S1SvImJ_G0013863.1 mouse_genomes_project 7 33191978 33192045 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081486.1 MGP_129S1SvImJ_G0031591.1 mouse_genomes_project 7 2357581 2368181 + MGP_129S1SvImJ_P0081486 Gm5065 protein_coding protein_coding MGP_129S1SvImJ_T0084915.1 MGP_129S1SvImJ_G0032495.1 mouse_genomes_project 7 91814339 91820085 + MGP_129S1SvImJ_P0084915 Fzd4 protein_coding protein_coding MGP_129S1SvImJ_T0081820.1 MGP_129S1SvImJ_G0031719.1 mouse_genomes_project 7 14593565 14630913 + MGP_129S1SvImJ_P0081820 Prkd2 protein_coding protein_coding MGP_129S1SvImJ_T0081821.1 MGP_129S1SvImJ_G0031719.1 mouse_genomes_project 7 14593728 14631008 + MGP_129S1SvImJ_P0081821 Prkd2 protein_coding protein_coding MGP_129S1SvImJ_T0081822.1 MGP_129S1SvImJ_G0031719.1 mouse_genomes_project 7 14594824 14600411 + Prkd2 protein_coding processed_transcript MGP_129S1SvImJ_T0081823.1 MGP_129S1SvImJ_G0031719.1 mouse_genomes_project 7 14595898 14599258 + Prkd2 protein_coding processed_transcript MGP_129S1SvImJ_T0081824.1 MGP_129S1SvImJ_G0031719.1 mouse_genomes_project 7 14596464 14602148 + Prkd2 protein_coding retained_intron MGP_129S1SvImJ_T0081825.1 MGP_129S1SvImJ_G0031719.1 mouse_genomes_project 7 14600354 14606752 + Prkd2 protein_coding retained_intron MGP_129S1SvImJ_T0081826.1 MGP_129S1SvImJ_G0031719.1 mouse_genomes_project 7 14622405 14630431 + Prkd2 protein_coding retained_intron MGP_129S1SvImJ_T0081827.1 MGP_129S1SvImJ_G0031719.1 mouse_genomes_project 7 14629790 14630677 + Prkd2 protein_coding retained_intron MGP_129S1SvImJ_T0083723.1 MGP_129S1SvImJ_G0032203.1 mouse_genomes_project 7 45375938 45389821 - Aldh16a1 protein_coding retained_intron MGP_129S1SvImJ_T0083724.1 MGP_129S1SvImJ_G0032203.1 mouse_genomes_project 7 45376159 45389868 - MGP_129S1SvImJ_P0083724 Aldh16a1 protein_coding protein_coding MGP_129S1SvImJ_T0083725.1 MGP_129S1SvImJ_G0032203.1 mouse_genomes_project 7 45377089 45379944 - MGP_129S1SvImJ_P0083725 Aldh16a1 protein_coding protein_coding MGP_129S1SvImJ_T0083726.1 MGP_129S1SvImJ_G0032203.1 mouse_genomes_project 7 45377699 45389879 - MGP_129S1SvImJ_P0083726 Aldh16a1 protein_coding protein_coding MGP_129S1SvImJ_T0083727.1 MGP_129S1SvImJ_G0032203.1 mouse_genomes_project 7 45378033 45379978 - Aldh16a1 protein_coding processed_transcript MGP_129S1SvImJ_T0083728.1 MGP_129S1SvImJ_G0032203.1 mouse_genomes_project 7 45380306 45381289 - Aldh16a1 protein_coding retained_intron MGP_129S1SvImJ_T0083729.1 MGP_129S1SvImJ_G0032203.1 mouse_genomes_project 7 45382652 45389785 - Aldh16a1 protein_coding processed_transcript MGP_129S1SvImJ_T0083730.1 MGP_129S1SvImJ_G0032203.1 mouse_genomes_project 7 45382713 45389742 - Aldh16a1 protein_coding processed_transcript MGP_129S1SvImJ_T0083731.1 MGP_129S1SvImJ_G0032203.1 mouse_genomes_project 7 45382792 45383105 - Aldh16a1 protein_coding processed_transcript MGP_129S1SvImJ_T0083732.1 MGP_129S1SvImJ_G0032203.1 mouse_genomes_project 7 45383137 45384434 - Aldh16a1 protein_coding retained_intron MGP_129S1SvImJ_T0086143.1 MGP_129S1SvImJ_G0032912.1 mouse_genomes_project 7 123425111 123445433 + MGP_129S1SvImJ_P0086143 Acsm5 protein_coding protein_coding MGP_129S1SvImJ_T0102797.1 MGP_129S1SvImJ_G0040629.1 mouse_genomes_project 7 89167526 89168402 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0081223.1 MGP_129S1SvImJ_G0031527.1 mouse_genomes_project 7 594242 606657 - MGP_129S1SvImJ_P0081223 Tmc4 protein_coding protein_coding MGP_129S1SvImJ_T0081224.1 MGP_129S1SvImJ_G0031527.1 mouse_genomes_project 7 594250 595343 - MGP_129S1SvImJ_P0081224 Tmc4 protein_coding protein_coding MGP_129S1SvImJ_T0081225.1 MGP_129S1SvImJ_G0031527.1 mouse_genomes_project 7 594417 599724 - Tmc4 protein_coding retained_intron MGP_129S1SvImJ_T0081226.1 MGP_129S1SvImJ_G0031527.1 mouse_genomes_project 7 599818 605806 - Tmc4 protein_coding retained_intron MGP_129S1SvImJ_T0081227.1 MGP_129S1SvImJ_G0031527.1 mouse_genomes_project 7 599932 606703 - Tmc4 protein_coding retained_intron MGP_129S1SvImJ_T0081228.1 MGP_129S1SvImJ_G0031527.1 mouse_genomes_project 7 604357 606663 - Tmc4 protein_coding retained_intron MGP_129S1SvImJ_T0085100.1 MGP_129S1SvImJ_G0032539.1 mouse_genomes_project 7 101168431 101207884 + MGP_129S1SvImJ_P0085100 Gucy2d protein_coding protein_coding MGP_129S1SvImJ_T0085101.1 MGP_129S1SvImJ_G0032539.1 mouse_genomes_project 7 101171444 101207883 + MGP_129S1SvImJ_P0085101 Gucy2d protein_coding protein_coding MGP_129S1SvImJ_T0085102.1 MGP_129S1SvImJ_G0032539.1 mouse_genomes_project 7 101196139 101203628 + MGP_129S1SvImJ_P0085102 Gucy2d protein_coding protein_coding MGP_129S1SvImJ_T0085103.1 MGP_129S1SvImJ_G0032539.1 mouse_genomes_project 7 101199974 101207883 + Gucy2d protein_coding processed_transcript MGP_129S1SvImJ_T0008933.1 MGP_129S1SvImJ_G0007214.1 mouse_genomes_project 7 75624379 75635881 - Gm45004 lincRNA lincRNA MGP_129S1SvImJ_T0084444.1 MGP_129S1SvImJ_G0032377.1 mouse_genomes_project 7 79969136 80387370 - MGP_129S1SvImJ_P0084444 Ntrk3 protein_coding protein_coding MGP_129S1SvImJ_T0084445.1 MGP_129S1SvImJ_G0032377.1 mouse_genomes_project 7 79975158 79987014 - MGP_129S1SvImJ_P0084445 Ntrk3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084446.1 MGP_129S1SvImJ_G0032377.1 mouse_genomes_project 7 79986650 80386820 - MGP_129S1SvImJ_P0084446 Ntrk3 protein_coding protein_coding MGP_129S1SvImJ_T0084447.1 MGP_129S1SvImJ_G0032377.1 mouse_genomes_project 7 79986677 80386826 - MGP_129S1SvImJ_P0084447 Ntrk3 protein_coding protein_coding MGP_129S1SvImJ_T0084448.1 MGP_129S1SvImJ_G0032377.1 mouse_genomes_project 7 80044376 80060796 - MGP_129S1SvImJ_P0084448 Ntrk3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084449.1 MGP_129S1SvImJ_G0032377.1 mouse_genomes_project 7 80094252 80386944 - MGP_129S1SvImJ_P0084449 Ntrk3 protein_coding protein_coding MGP_129S1SvImJ_T0084450.1 MGP_129S1SvImJ_G0032377.1 mouse_genomes_project 7 80095885 80178454 - Ntrk3 protein_coding processed_transcript MGP_129S1SvImJ_T0084451.1 MGP_129S1SvImJ_G0032377.1 mouse_genomes_project 7 80096193 80152664 - MGP_129S1SvImJ_P0084451 Ntrk3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084452.1 MGP_129S1SvImJ_G0032377.1 mouse_genomes_project 7 80152625 80252131 - Ntrk3 protein_coding processed_transcript MGP_129S1SvImJ_T0084453.1 MGP_129S1SvImJ_G0032377.1 mouse_genomes_project 7 80249634 80386937 - Ntrk3 protein_coding retained_intron MGP_129S1SvImJ_T0084454.1 MGP_129S1SvImJ_G0032377.1 mouse_genomes_project 7 80279349 80380929 - Ntrk3 protein_coding processed_transcript MGP_129S1SvImJ_T0084455.1 MGP_129S1SvImJ_G0032377.1 mouse_genomes_project 7 80324325 80435370 - Ntrk3 protein_coding processed_transcript MGP_129S1SvImJ_T0084456.1 MGP_129S1SvImJ_G0032377.1 mouse_genomes_project 7 80325059 80387365 - MGP_129S1SvImJ_P0084456 Ntrk3 protein_coding protein_coding MGP_129S1SvImJ_T0084457.1 MGP_129S1SvImJ_G0032377.1 mouse_genomes_project 7 80386572 80472260 - MGP_129S1SvImJ_P0084457 Ntrk3 protein_coding protein_coding MGP_129S1SvImJ_T0084458.1 MGP_129S1SvImJ_G0032377.1 mouse_genomes_project 7 80386842 80388302 - Ntrk3 protein_coding processed_transcript MGP_129S1SvImJ_T0084459.1 MGP_129S1SvImJ_G0032377.1 mouse_genomes_project 7 80390669 80545764 - Ntrk3 protein_coding processed_transcript MGP_129S1SvImJ_T0084460.1 MGP_129S1SvImJ_G0032377.1 mouse_genomes_project 7 80396980 80565557 - Ntrk3 protein_coding processed_transcript MGP_129S1SvImJ_T0084461.1 MGP_129S1SvImJ_G0032377.1 mouse_genomes_project 7 80404026 80472645 - Ntrk3 protein_coding processed_transcript MGP_129S1SvImJ_T0084462.1 MGP_129S1SvImJ_G0032377.1 mouse_genomes_project 7 80554244 80565559 - Ntrk3 protein_coding processed_transcript MGP_129S1SvImJ_T0084463.1 MGP_129S1SvImJ_G0032377.1 mouse_genomes_project 7 80558019 80565559 - Ntrk3 protein_coding processed_transcript MGP_129S1SvImJ_T0083624.1 MGP_129S1SvImJ_G0032171.1 mouse_genomes_project 7 44771102 44785612 + MGP_129S1SvImJ_P0083624 Kcnc3 protein_coding protein_coding MGP_129S1SvImJ_T0083625.1 MGP_129S1SvImJ_G0032171.1 mouse_genomes_project 7 44771102 44785612 + MGP_129S1SvImJ_P0083625 Kcnc3 protein_coding protein_coding MGP_129S1SvImJ_T0083626.1 MGP_129S1SvImJ_G0032171.1 mouse_genomes_project 7 44771102 44781743 + MGP_129S1SvImJ_P0083626 Kcnc3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0081898.1 MGP_129S1SvImJ_G0031751.1 mouse_genomes_project 7 16931982 16942273 + MGP_129S1SvImJ_P0081898 Mypop protein_coding protein_coding MGP_129S1SvImJ_T0081899.1 MGP_129S1SvImJ_G0031751.1 mouse_genomes_project 7 16932056 16942275 + MGP_129S1SvImJ_P0081899 Mypop protein_coding protein_coding MGP_129S1SvImJ_T0081900.1 MGP_129S1SvImJ_G0031751.1 mouse_genomes_project 7 16932708 16933840 + Mypop protein_coding retained_intron MGP_129S1SvImJ_T0015904.1 MGP_129S1SvImJ_G0013993.1 mouse_genomes_project 7 118875178 118875518 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0087915.1 MGP_129S1SvImJ_G0033292.1 mouse_genomes_project 7 150238860 150242720 + MGP_129S1SvImJ_P0087915 Fgf4 protein_coding protein_coding MGP_129S1SvImJ_T0005657.1 MGP_129S1SvImJ_G0004765.1 mouse_genomes_project 7 81147454 81148578 - Gm44558 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0005658.1 MGP_129S1SvImJ_G0004765.1 mouse_genomes_project 7 81147458 81148802 - Gm44558 bidirectional_promoter_lncRNA bidirectional_promoter_lncRNA MGP_129S1SvImJ_T0087052.1 MGP_129S1SvImJ_G0033089.1 mouse_genomes_project 7 134071143 134119048 + MGP_129S1SvImJ_P0087052 Wdr11 protein_coding protein_coding MGP_129S1SvImJ_T0087053.1 MGP_129S1SvImJ_G0033089.1 mouse_genomes_project 7 134071188 134108969 + Wdr11 protein_coding retained_intron MGP_129S1SvImJ_T0087054.1 MGP_129S1SvImJ_G0033089.1 mouse_genomes_project 7 134071198 134095513 + Wdr11 protein_coding retained_intron MGP_129S1SvImJ_T0087055.1 MGP_129S1SvImJ_G0033089.1 mouse_genomes_project 7 134072337 134116156 + MGP_129S1SvImJ_P0087055 Wdr11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087056.1 MGP_129S1SvImJ_G0033089.1 mouse_genomes_project 7 134085250 134091019 + Wdr11 protein_coding processed_transcript MGP_129S1SvImJ_T0087057.1 MGP_129S1SvImJ_G0033089.1 mouse_genomes_project 7 134086729 134119046 + Wdr11 protein_coding retained_intron MGP_129S1SvImJ_T0087058.1 MGP_129S1SvImJ_G0033089.1 mouse_genomes_project 7 134091017 134097273 + MGP_129S1SvImJ_P0087058 Wdr11 protein_coding protein_coding MGP_129S1SvImJ_T0087059.1 MGP_129S1SvImJ_G0033089.1 mouse_genomes_project 7 134108377 134119044 + Wdr11 protein_coding retained_intron MGP_129S1SvImJ_T0087060.1 MGP_129S1SvImJ_G0033089.1 mouse_genomes_project 7 134112352 134116981 + MGP_129S1SvImJ_P0087060 Wdr11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085447.1 MGP_129S1SvImJ_G0032620.1 mouse_genomes_project 7 105722823 105723771 + MGP_129S1SvImJ_P0085447 Olfr555 protein_coding protein_coding MGP_129S1SvImJ_T0008974.1 MGP_129S1SvImJ_G0007237.1 mouse_genomes_project 7 95613175 95641692 - Gm9934 lincRNA lincRNA MGP_129S1SvImJ_T0008975.1 MGP_129S1SvImJ_G0007237.1 mouse_genomes_project 7 95627676 95641460 - Gm9934 lincRNA lincRNA MGP_129S1SvImJ_T0087139.1 MGP_129S1SvImJ_G0033105.1 mouse_genomes_project 7 136036836 136077477 + MGP_129S1SvImJ_P0087139 Acadsb protein_coding protein_coding MGP_129S1SvImJ_T0087140.1 MGP_129S1SvImJ_G0033105.1 mouse_genomes_project 7 136036938 136076029 + MGP_129S1SvImJ_P0087140 Acadsb protein_coding protein_coding MGP_129S1SvImJ_T0087141.1 MGP_129S1SvImJ_G0033105.1 mouse_genomes_project 7 136051384 136056938 + Acadsb protein_coding retained_intron MGP_129S1SvImJ_T0087142.1 MGP_129S1SvImJ_G0033105.1 mouse_genomes_project 7 136051419 136055738 + Acadsb protein_coding retained_intron MGP_129S1SvImJ_T0087143.1 MGP_129S1SvImJ_G0033105.1 mouse_genomes_project 7 136055531 136059947 + Acadsb protein_coding retained_intron MGP_129S1SvImJ_T0087144.1 MGP_129S1SvImJ_G0033105.1 mouse_genomes_project 7 136056758 136077475 + Acadsb protein_coding retained_intron MGP_129S1SvImJ_T0087145.1 MGP_129S1SvImJ_G0033105.1 mouse_genomes_project 7 136062050 136067387 + Acadsb protein_coding retained_intron MGP_129S1SvImJ_T0015845.1 MGP_129S1SvImJ_G0013934.1 mouse_genomes_project 7 76350135 76350366 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0087695.1 MGP_129S1SvImJ_G0033252.1 mouse_genomes_project 7 147543930 147544932 + MGP_129S1SvImJ_P0087695 Krtap5-4 protein_coding protein_coding MGP_129S1SvImJ_T0018444.1 MGP_129S1SvImJ_G0015687.1 mouse_genomes_project 7 122069537 122071224 + 4930583K01Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0010929.1 MGP_129S1SvImJ_G0009045.1 mouse_genomes_project 7 102359918 102360013 + Mir326 miRNA miRNA MGP_129S1SvImJ_T0082766.1 MGP_129S1SvImJ_G0031982.1 mouse_genomes_project 7 28224236 28239616 + MGP_129S1SvImJ_P0082766 Dpf1 protein_coding protein_coding MGP_129S1SvImJ_T0082767.1 MGP_129S1SvImJ_G0031982.1 mouse_genomes_project 7 28224261 28239944 + MGP_129S1SvImJ_P0082767 Dpf1 protein_coding protein_coding MGP_129S1SvImJ_T0082768.1 MGP_129S1SvImJ_G0031982.1 mouse_genomes_project 7 28228202 28239248 + MGP_129S1SvImJ_P0082768 Dpf1 protein_coding protein_coding MGP_129S1SvImJ_T0082769.1 MGP_129S1SvImJ_G0031982.1 mouse_genomes_project 7 28228290 28239240 + Dpf1 protein_coding retained_intron MGP_129S1SvImJ_T0082770.1 MGP_129S1SvImJ_G0031982.1 mouse_genomes_project 7 28228290 28239255 + MGP_129S1SvImJ_P0082770 Dpf1 protein_coding protein_coding MGP_129S1SvImJ_T0082771.1 MGP_129S1SvImJ_G0031982.1 mouse_genomes_project 7 28228296 28239940 + Dpf1 protein_coding processed_transcript MGP_129S1SvImJ_T0082772.1 MGP_129S1SvImJ_G0031982.1 mouse_genomes_project 7 28229790 28235563 + MGP_129S1SvImJ_P0082772 Dpf1 protein_coding protein_coding MGP_129S1SvImJ_T0082773.1 MGP_129S1SvImJ_G0031982.1 mouse_genomes_project 7 28229883 28233977 + Dpf1 protein_coding processed_transcript MGP_129S1SvImJ_T0082774.1 MGP_129S1SvImJ_G0031982.1 mouse_genomes_project 7 28235284 28238089 + MGP_129S1SvImJ_P0082774 Dpf1 protein_coding protein_coding MGP_129S1SvImJ_T0082775.1 MGP_129S1SvImJ_G0031982.1 mouse_genomes_project 7 28236494 28238915 + Dpf1 protein_coding retained_intron MGP_129S1SvImJ_T0081546.1 MGP_129S1SvImJ_G0031617.1 mouse_genomes_project 7 4239440 4245349 - MGP_129S1SvImJ_P0081546 Zfp773 protein_coding protein_coding MGP_129S1SvImJ_T0015716.1 MGP_129S1SvImJ_G0013805.1 mouse_genomes_project 7 9907671 9908635 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018360.1 MGP_129S1SvImJ_G0015654.1 mouse_genomes_project 7 2016541 2022933 - processed_transcript processed_transcript MGP_129S1SvImJ_T0018361.1 MGP_129S1SvImJ_G0015654.1 mouse_genomes_project 7 2016542 2022848 - processed_transcript processed_transcript MGP_129S1SvImJ_T0085196.1 MGP_129S1SvImJ_G0032567.1 mouse_genomes_project 7 103200651 103247605 - MGP_129S1SvImJ_P0085196 Ppme1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0085197.1 MGP_129S1SvImJ_G0032567.1 mouse_genomes_project 7 103200657 103247678 - MGP_129S1SvImJ_P0085197 Ppme1 protein_coding protein_coding MGP_129S1SvImJ_T0008935.1 MGP_129S1SvImJ_G0007216.1 mouse_genomes_project 7 76463815 76495130 - 0610006L08Rik lincRNA lincRNA MGP_129S1SvImJ_T0008936.1 MGP_129S1SvImJ_G0007216.1 mouse_genomes_project 7 76468608 76495127 - 0610006L08Rik lincRNA lincRNA MGP_129S1SvImJ_T0015928.1 MGP_129S1SvImJ_G0014017.1 mouse_genomes_project 7 132531547 132531894 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009015.1 MGP_129S1SvImJ_G0007262.1 mouse_genomes_project 7 128676452 128694152 - Gm15339 lincRNA lincRNA MGP_129S1SvImJ_T0084205.1 MGP_129S1SvImJ_G0032332.1 mouse_genomes_project 7 65000459 65057040 - MGP_129S1SvImJ_P0084205 Klf13 protein_coding protein_coding MGP_129S1SvImJ_T0084206.1 MGP_129S1SvImJ_G0032332.1 mouse_genomes_project 7 65005309 65054426 - MGP_129S1SvImJ_P0084206 Klf13 protein_coding protein_coding MGP_129S1SvImJ_T0084207.1 MGP_129S1SvImJ_G0032332.1 mouse_genomes_project 7 65005326 65041639 - MGP_129S1SvImJ_P0084207 Klf13 protein_coding protein_coding MGP_129S1SvImJ_T0084209.1 MGP_129S1SvImJ_G0032332.1 mouse_genomes_project 7 65053523 65054457 - Klf13 protein_coding retained_intron MGP_129S1SvImJ_T0081271.1 MGP_129S1SvImJ_G0031535.1 mouse_genomes_project 7 814485 826420 - MGP_129S1SvImJ_P0081271 protein_coding protein_coding MGP_129S1SvImJ_T0087913.1 MGP_129S1SvImJ_G0033291.1 mouse_genomes_project 7 150214021 150220424 + MGP_129S1SvImJ_P0087913 Fgf3 protein_coding protein_coding MGP_129S1SvImJ_T0087914.1 MGP_129S1SvImJ_G0033291.1 mouse_genomes_project 7 150216299 150222141 + MGP_129S1SvImJ_P0087914 Fgf3 protein_coding protein_coding MGP_129S1SvImJ_T0084823.1 MGP_129S1SvImJ_G0032450.1 mouse_genomes_project 7 85795472 85805819 + MGP_129S1SvImJ_P0084823 Stard5 protein_coding protein_coding MGP_129S1SvImJ_T0084824.1 MGP_129S1SvImJ_G0032450.1 mouse_genomes_project 7 85795513 85796973 + Stard5 protein_coding retained_intron MGP_129S1SvImJ_T0084825.1 MGP_129S1SvImJ_G0032450.1 mouse_genomes_project 7 85795513 85816611 + MGP_129S1SvImJ_P0084825 Stard5 protein_coding protein_coding MGP_129S1SvImJ_T0084826.1 MGP_129S1SvImJ_G0032450.1 mouse_genomes_project 7 85795529 85801576 + Stard5 protein_coding retained_intron MGP_129S1SvImJ_T0084827.1 MGP_129S1SvImJ_G0032450.1 mouse_genomes_project 7 85796054 85796857 + Stard5 protein_coding processed_transcript MGP_129S1SvImJ_T0008866.1 MGP_129S1SvImJ_G0007163.1 mouse_genomes_project 7 40003619 40100865 - Gm28807 lincRNA lincRNA MGP_129S1SvImJ_T0009054.1 MGP_129S1SvImJ_G0007288.1 mouse_genomes_project 7 135751298 135755342 + 1700029B22Rik lincRNA lincRNA MGP_129S1SvImJ_T0009055.1 MGP_129S1SvImJ_G0007288.1 mouse_genomes_project 7 135751303 135755342 + 1700029B22Rik lincRNA lincRNA MGP_129S1SvImJ_T0009056.1 MGP_129S1SvImJ_G0007288.1 mouse_genomes_project 7 135751341 135755320 + 1700029B22Rik lincRNA lincRNA MGP_129S1SvImJ_T0015773.1 MGP_129S1SvImJ_G0013862.1 mouse_genomes_project 7 33080226 33081010 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0084766.1 MGP_129S1SvImJ_G0032432.1 mouse_genomes_project 7 83639686 83666547 + MGP_129S1SvImJ_P0084766 Whamm protein_coding protein_coding MGP_129S1SvImJ_T0083033.1 MGP_129S1SvImJ_G0032042.1 mouse_genomes_project 7 29738637 29741804 - MGP_129S1SvImJ_P0083033 Gapdhs protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083034.1 MGP_129S1SvImJ_G0032042.1 mouse_genomes_project 7 29738642 29750044 - MGP_129S1SvImJ_P0083034 Gapdhs protein_coding protein_coding MGP_129S1SvImJ_T0083035.1 MGP_129S1SvImJ_G0032042.1 mouse_genomes_project 7 29738749 29750066 - MGP_129S1SvImJ_P0083035 Gapdhs protein_coding protein_coding MGP_129S1SvImJ_T0085145.1 MGP_129S1SvImJ_G0032551.1 mouse_genomes_project 7 102278104 102283935 - MGP_129S1SvImJ_P0085145 Rps3 protein_coding protein_coding MGP_129S1SvImJ_T0085146.1 MGP_129S1SvImJ_G0032551.1 mouse_genomes_project 7 102278112 102283848 - MGP_129S1SvImJ_P0085146 Rps3 protein_coding protein_coding MGP_129S1SvImJ_T0085147.1 MGP_129S1SvImJ_G0032551.1 mouse_genomes_project 7 102279089 102283847 - Rps3 protein_coding retained_intron MGP_129S1SvImJ_T0085148.1 MGP_129S1SvImJ_G0032551.1 mouse_genomes_project 7 102279906 102283831 - Rps3 protein_coding retained_intron MGP_129S1SvImJ_T0008849.1 MGP_129S1SvImJ_G0007152.1 mouse_genomes_project 7 36608215 36616812 - Gm28078 lincRNA lincRNA MGP_129S1SvImJ_T0015718.1 MGP_129S1SvImJ_G0013807.1 mouse_genomes_project 7 10131900 10132887 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009011.1 MGP_129S1SvImJ_G0007259.1 mouse_genomes_project 7 124656998 124661080 - 9030407P20Rik lincRNA lincRNA MGP_129S1SvImJ_T0009012.1 MGP_129S1SvImJ_G0007259.1 mouse_genomes_project 7 124657294 124661120 - 9030407P20Rik lincRNA lincRNA MGP_129S1SvImJ_T0081272.1 MGP_129S1SvImJ_G0031536.1 mouse_genomes_project 7 933670 984375 - MGP_129S1SvImJ_P0081272 Lair1 protein_coding protein_coding MGP_129S1SvImJ_T0081273.1 MGP_129S1SvImJ_G0031536.1 mouse_genomes_project 7 937213 984400 - MGP_129S1SvImJ_P0081273 Lair1 protein_coding protein_coding MGP_129S1SvImJ_T0081274.1 MGP_129S1SvImJ_G0031536.1 mouse_genomes_project 7 938199 984370 - MGP_129S1SvImJ_P0081274 Lair1 protein_coding protein_coding MGP_129S1SvImJ_T0081275.1 MGP_129S1SvImJ_G0031536.1 mouse_genomes_project 7 939120 984357 - MGP_129S1SvImJ_P0081275 Lair1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081276.1 MGP_129S1SvImJ_G0031536.1 mouse_genomes_project 7 939147 984335 - MGP_129S1SvImJ_P0081276 Lair1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081277.1 MGP_129S1SvImJ_G0031536.1 mouse_genomes_project 7 939307 950387 - Lair1 protein_coding processed_transcript MGP_129S1SvImJ_T0081278.1 MGP_129S1SvImJ_G0031536.1 mouse_genomes_project 7 939713 984312 - MGP_129S1SvImJ_P0081278 Lair1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081279.1 MGP_129S1SvImJ_G0031536.1 mouse_genomes_project 7 939803 984337 - MGP_129S1SvImJ_P0081279 Lair1 protein_coding protein_coding MGP_129S1SvImJ_T0081280.1 MGP_129S1SvImJ_G0031536.1 mouse_genomes_project 7 939803 984337 - MGP_129S1SvImJ_P0081280 Lair1 protein_coding protein_coding MGP_129S1SvImJ_T0081281.1 MGP_129S1SvImJ_G0031536.1 mouse_genomes_project 7 950541 984344 - Lair1 protein_coding processed_transcript MGP_129S1SvImJ_T0100101.1 MGP_129S1SvImJ_G0038168.1 mouse_genomes_project 7 147284929 147285036 - Gm25416 snRNA snRNA MGP_129S1SvImJ_T0010878.1 MGP_129S1SvImJ_G0008994.1 mouse_genomes_project 7 29557857 29557934 + Gm38670 miRNA miRNA MGP_129S1SvImJ_T0082518.1 MGP_129S1SvImJ_G0031915.1 mouse_genomes_project 7 26186488 26194397 + MGP_129S1SvImJ_P0082518 Hipk4 protein_coding protein_coding MGP_129S1SvImJ_T0082519.1 MGP_129S1SvImJ_G0031915.1 mouse_genomes_project 7 26190280 26194392 + MGP_129S1SvImJ_P0082519 Hipk4 protein_coding protein_coding MGP_129S1SvImJ_T0005262.1 MGP_129S1SvImJ_G0004474.1 mouse_genomes_project 7 82745025 82751653 + Gm44649 antisense antisense MGP_129S1SvImJ_T0005263.1 MGP_129S1SvImJ_G0004474.1 mouse_genomes_project 7 82745048 82746377 + Gm44649 antisense antisense MGP_129S1SvImJ_T0005269.1 MGP_129S1SvImJ_G0004479.1 mouse_genomes_project 7 95297326 95304585 - 4632427E13Rik antisense antisense MGP_129S1SvImJ_T0005270.1 MGP_129S1SvImJ_G0004479.1 mouse_genomes_project 7 95300764 95304594 - 4632427E13Rik antisense antisense MGP_129S1SvImJ_T0005271.1 MGP_129S1SvImJ_G0004479.1 mouse_genomes_project 7 95300784 95304594 - 4632427E13Rik antisense antisense MGP_129S1SvImJ_T0005272.1 MGP_129S1SvImJ_G0004479.1 mouse_genomes_project 7 95303831 95304585 - 4632427E13Rik antisense antisense MGP_129S1SvImJ_T0102700.1 MGP_129S1SvImJ_G0040533.1 mouse_genomes_project 7 11865037 11865608 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0087158.1 MGP_129S1SvImJ_G0033112.1 mouse_genomes_project 7 137252712 137272428 - MGP_129S1SvImJ_P0087158 Oat protein_coding protein_coding MGP_129S1SvImJ_T0081586.1 MGP_129S1SvImJ_G0031647.1 mouse_genomes_project 7 9902785 9927344 + MGP_129S1SvImJ_P0081586 2900092C05Rik protein_coding protein_coding MGP_129S1SvImJ_T0015916.1 MGP_129S1SvImJ_G0014005.1 mouse_genomes_project 7 129758200 129759534 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101300.1 MGP_129S1SvImJ_G0039367.1 mouse_genomes_project 7 27134242 27134367 + AF357399 snoRNA snoRNA MGP_129S1SvImJ_T0008915.1 MGP_129S1SvImJ_G0007199.1 mouse_genomes_project 7 73476012 73540910 + 1700011C11Rik lincRNA lincRNA MGP_129S1SvImJ_T0086054.1 MGP_129S1SvImJ_G0032891.1 mouse_genomes_project 7 120074969 120183739 - MGP_129S1SvImJ_P0086054 Pik3c2a protein_coding protein_coding MGP_129S1SvImJ_T0086055.1 MGP_129S1SvImJ_G0032891.1 mouse_genomes_project 7 120074980 120078289 - Pik3c2a protein_coding retained_intron MGP_129S1SvImJ_T0086056.1 MGP_129S1SvImJ_G0032891.1 mouse_genomes_project 7 120077270 120108590 - MGP_129S1SvImJ_P0086056 Pik3c2a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086057.1 MGP_129S1SvImJ_G0032891.1 mouse_genomes_project 7 120077392 120183739 - MGP_129S1SvImJ_P0086057 Pik3c2a protein_coding protein_coding MGP_129S1SvImJ_T0086058.1 MGP_129S1SvImJ_G0032891.1 mouse_genomes_project 7 120079565 120080307 - Pik3c2a protein_coding retained_intron MGP_129S1SvImJ_T0086059.1 MGP_129S1SvImJ_G0032891.1 mouse_genomes_project 7 120129882 120183737 - MGP_129S1SvImJ_P0086059 Pik3c2a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086060.1 MGP_129S1SvImJ_G0032891.1 mouse_genomes_project 7 120130870 120183729 - Pik3c2a protein_coding retained_intron MGP_129S1SvImJ_T0082562.1 MGP_129S1SvImJ_G0031924.1 mouse_genomes_project 7 26601831 26617754 + MGP_129S1SvImJ_P0082562 Zfp607a protein_coding protein_coding MGP_129S1SvImJ_T0086508.1 MGP_129S1SvImJ_G0032988.1 mouse_genomes_project 7 130872281 130878216 - MGP_129S1SvImJ_P0086508 Il27 protein_coding protein_coding MGP_129S1SvImJ_T0086224.1 MGP_129S1SvImJ_G0032934.1 mouse_genomes_project 7 124846436 124918416 + MGP_129S1SvImJ_P0086224 Eef2k protein_coding protein_coding MGP_129S1SvImJ_T0086225.1 MGP_129S1SvImJ_G0032934.1 mouse_genomes_project 7 124846436 124914588 + MGP_129S1SvImJ_P0086225 Eef2k protein_coding unknown_likely_coding MGP_129S1SvImJ_T0086226.1 MGP_129S1SvImJ_G0032934.1 mouse_genomes_project 7 124847205 124915191 + MGP_129S1SvImJ_P0086226 Eef2k protein_coding protein_coding MGP_129S1SvImJ_T0086227.1 MGP_129S1SvImJ_G0032934.1 mouse_genomes_project 7 124847223 124863800 + MGP_129S1SvImJ_P0086227 Eef2k protein_coding protein_coding MGP_129S1SvImJ_T0086228.1 MGP_129S1SvImJ_G0032934.1 mouse_genomes_project 7 124856462 124891510 + MGP_129S1SvImJ_P0086228 Eef2k protein_coding protein_coding MGP_129S1SvImJ_T0086229.1 MGP_129S1SvImJ_G0032934.1 mouse_genomes_project 7 124856462 124911541 + MGP_129S1SvImJ_P0086229 Eef2k protein_coding protein_coding MGP_129S1SvImJ_T0086230.1 MGP_129S1SvImJ_G0032934.1 mouse_genomes_project 7 124856474 124914693 + MGP_129S1SvImJ_P0086230 Eef2k protein_coding protein_coding MGP_129S1SvImJ_T0086231.1 MGP_129S1SvImJ_G0032934.1 mouse_genomes_project 7 124886204 124891029 + Eef2k protein_coding retained_intron MGP_129S1SvImJ_T0086232.1 MGP_129S1SvImJ_G0032934.1 mouse_genomes_project 7 124900853 124906485 + MGP_129S1SvImJ_P0086232 Eef2k protein_coding protein_coding MGP_129S1SvImJ_T0086233.1 MGP_129S1SvImJ_G0032934.1 mouse_genomes_project 7 124903021 124914775 + Eef2k protein_coding processed_transcript MGP_129S1SvImJ_T0102671.1 MGP_129S1SvImJ_G0040504.1 mouse_genomes_project 7 7806792 7807671 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0082109.1 MGP_129S1SvImJ_G0031815.1 mouse_genomes_project 7 22389231 22404598 + MGP_129S1SvImJ_P0082109 Zfp112 protein_coding protein_coding MGP_129S1SvImJ_T0082110.1 MGP_129S1SvImJ_G0031815.1 mouse_genomes_project 7 22389239 22404139 + MGP_129S1SvImJ_P0082110 Zfp112 protein_coding protein_coding MGP_129S1SvImJ_T0082111.1 MGP_129S1SvImJ_G0031815.1 mouse_genomes_project 7 22389275 22391368 + Zfp112 protein_coding retained_intron MGP_129S1SvImJ_T0082112.1 MGP_129S1SvImJ_G0031815.1 mouse_genomes_project 7 22389289 22409862 + MGP_129S1SvImJ_P0082112 Zfp112 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0085877.1 MGP_129S1SvImJ_G0032859.1 mouse_genomes_project 7 114273092 114316520 + MGP_129S1SvImJ_P0085877 Ampd3 protein_coding protein_coding MGP_129S1SvImJ_T0085878.1 MGP_129S1SvImJ_G0032859.1 mouse_genomes_project 7 114273219 114296162 + Ampd3 protein_coding processed_transcript MGP_129S1SvImJ_T0085879.1 MGP_129S1SvImJ_G0032859.1 mouse_genomes_project 7 114277479 114317006 + MGP_129S1SvImJ_P0085879 Ampd3 protein_coding protein_coding MGP_129S1SvImJ_T0085880.1 MGP_129S1SvImJ_G0032859.1 mouse_genomes_project 7 114277663 114299601 + Ampd3 protein_coding retained_intron MGP_129S1SvImJ_T0085881.1 MGP_129S1SvImJ_G0032859.1 mouse_genomes_project 7 114278547 114293692 + MGP_129S1SvImJ_P0085881 Ampd3 protein_coding protein_coding MGP_129S1SvImJ_T0085882.1 MGP_129S1SvImJ_G0032859.1 mouse_genomes_project 7 114279119 114293614 + MGP_129S1SvImJ_P0085882 Ampd3 protein_coding protein_coding MGP_129S1SvImJ_T0085883.1 MGP_129S1SvImJ_G0032859.1 mouse_genomes_project 7 114282579 114296207 + MGP_129S1SvImJ_P0085883 Ampd3 protein_coding protein_coding MGP_129S1SvImJ_T0083485.1 MGP_129S1SvImJ_G0032135.1 mouse_genomes_project 7 43679629 43688517 - MGP_129S1SvImJ_P0083485 Siglece protein_coding protein_coding MGP_129S1SvImJ_T0083486.1 MGP_129S1SvImJ_G0032135.1 mouse_genomes_project 7 43680100 43687709 - MGP_129S1SvImJ_P0083486 Siglece protein_coding protein_coding MGP_129S1SvImJ_T0085471.1 MGP_129S1SvImJ_G0032642.1 mouse_genomes_project 7 106242158 106243112 - MGP_129S1SvImJ_P0085471 Olfr589 protein_coding protein_coding MGP_129S1SvImJ_T0002217.1 MGP_129S1SvImJ_G0002129.1 mouse_genomes_project 7 410130 411616 - TEC TEC MGP_129S1SvImJ_T0083630.1 MGP_129S1SvImJ_G0032174.1 mouse_genomes_project 7 44863393 44864664 + MGP_129S1SvImJ_P0083630 protein_coding protein_coding MGP_129S1SvImJ_T0085397.1 MGP_129S1SvImJ_G0032601.1 mouse_genomes_project 7 105127732 105133697 - MGP_129S1SvImJ_P0085397 Art5 protein_coding protein_coding MGP_129S1SvImJ_T0085398.1 MGP_129S1SvImJ_G0032601.1 mouse_genomes_project 7 105127733 105131083 - MGP_129S1SvImJ_P0085398 Art5 protein_coding protein_coding MGP_129S1SvImJ_T0085399.1 MGP_129S1SvImJ_G0032601.1 mouse_genomes_project 7 105127967 105130793 - MGP_129S1SvImJ_P0085399 Art5 protein_coding protein_coding MGP_129S1SvImJ_T0085400.1 MGP_129S1SvImJ_G0032601.1 mouse_genomes_project 7 105127967 105130347 - MGP_129S1SvImJ_P0085400 Art5 protein_coding protein_coding MGP_129S1SvImJ_T0081396.1 MGP_129S1SvImJ_G0031556.1 mouse_genomes_project 7 1632654 1652884 - MGP_129S1SvImJ_P0081396 Tmem150b protein_coding protein_coding MGP_129S1SvImJ_T0081398.1 MGP_129S1SvImJ_G0031556.1 mouse_genomes_project 7 1641503 1652717 - MGP_129S1SvImJ_P0081398 Tmem150b protein_coding protein_coding MGP_129S1SvImJ_T0101769.1 MGP_129S1SvImJ_G0039750.1 mouse_genomes_project 7 130399694 130404077 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101770.1 MGP_129S1SvImJ_G0039750.1 mouse_genomes_project 7 130401318 130402275 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0081527.1 MGP_129S1SvImJ_G0031606.1 mouse_genomes_project 7 3557610 3558555 + MGP_129S1SvImJ_P0081527 Olfr1336 protein_coding protein_coding MGP_129S1SvImJ_T0015830.1 MGP_129S1SvImJ_G0013919.1 mouse_genomes_project 7 63565138 63565387 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081602.1 MGP_129S1SvImJ_G0031655.1 mouse_genomes_project 7 10294731 10306124 + MGP_129S1SvImJ_P0081602 Zscan22 protein_coding protein_coding MGP_129S1SvImJ_T0081603.1 MGP_129S1SvImJ_G0031655.1 mouse_genomes_project 7 10294752 10306968 + MGP_129S1SvImJ_P0081603 Zscan22 protein_coding protein_coding MGP_129S1SvImJ_T0081604.1 MGP_129S1SvImJ_G0031655.1 mouse_genomes_project 7 10294757 10305422 + MGP_129S1SvImJ_P0081604 Zscan22 protein_coding protein_coding MGP_129S1SvImJ_T0081605.1 MGP_129S1SvImJ_G0031655.1 mouse_genomes_project 7 10294783 10306127 + MGP_129S1SvImJ_P0081605 Zscan22 protein_coding protein_coding MGP_129S1SvImJ_T0081941.1 MGP_129S1SvImJ_G0031761.1 mouse_genomes_project 7 17096373 17110598 - MGP_129S1SvImJ_P0081941 Qpctl protein_coding protein_coding MGP_129S1SvImJ_T0081942.1 MGP_129S1SvImJ_G0031761.1 mouse_genomes_project 7 17101466 17108835 - Qpctl protein_coding retained_intron MGP_129S1SvImJ_T0010879.1 MGP_129S1SvImJ_G0008995.1 mouse_genomes_project 7 29597941 29597999 + Mir3569 miRNA miRNA MGP_129S1SvImJ_T0087473.1 MGP_129S1SvImJ_G0033208.1 mouse_genomes_project 7 146226112 146236841 + MGP_129S1SvImJ_P0087473 B4galnt4 protein_coding protein_coding MGP_129S1SvImJ_T0083879.1 MGP_129S1SvImJ_G0032242.1 mouse_genomes_project 7 46018027 46026535 - MGP_129S1SvImJ_P0083879 Sphk2 protein_coding protein_coding MGP_129S1SvImJ_T0083880.1 MGP_129S1SvImJ_G0032242.1 mouse_genomes_project 7 46018824 46026435 - MGP_129S1SvImJ_P0083880 Sphk2 protein_coding protein_coding MGP_129S1SvImJ_T0083881.1 MGP_129S1SvImJ_G0032242.1 mouse_genomes_project 7 46018842 46023760 - MGP_129S1SvImJ_P0083881 Sphk2 protein_coding protein_coding MGP_129S1SvImJ_T0085578.1 MGP_129S1SvImJ_G0032718.1 mouse_genomes_project 7 107673023 107673965 + MGP_129S1SvImJ_P0085578 Olfr651 protein_coding protein_coding MGP_129S1SvImJ_T0005190.1 MGP_129S1SvImJ_G0004422.1 mouse_genomes_project 7 23843990 23916749 + antisense antisense MGP_129S1SvImJ_T0005191.1 MGP_129S1SvImJ_G0004422.1 mouse_genomes_project 7 23843994 23852926 + antisense antisense MGP_129S1SvImJ_T0005192.1 MGP_129S1SvImJ_G0004422.1 mouse_genomes_project 7 23851994 23852763 + antisense antisense MGP_129S1SvImJ_T0005193.1 MGP_129S1SvImJ_G0004422.1 mouse_genomes_project 7 23862599 24058073 + antisense antisense MGP_129S1SvImJ_T0082419.1 MGP_129S1SvImJ_G0031890.1 mouse_genomes_project 7 25335653 25352779 + MGP_129S1SvImJ_P0082419 Cyp2b19 protein_coding protein_coding MGP_129S1SvImJ_T0082420.1 MGP_129S1SvImJ_G0031890.1 mouse_genomes_project 7 25335674 25345793 + Cyp2b19 protein_coding retained_intron MGP_129S1SvImJ_T0082421.1 MGP_129S1SvImJ_G0031890.1 mouse_genomes_project 7 25346699 25351540 + Cyp2b19 protein_coding retained_intron MGP_129S1SvImJ_T0010931.1 MGP_129S1SvImJ_G0009047.1 mouse_genomes_project 7 104452443 104452511 + Mir139 miRNA miRNA MGP_129S1SvImJ_T0087119.1 MGP_129S1SvImJ_G0033097.1 mouse_genomes_project 7 135742493 135751174 - MGP_129S1SvImJ_P0087119 4933402N03Rik protein_coding protein_coding MGP_129S1SvImJ_T0100075.1 MGP_129S1SvImJ_G0038142.1 mouse_genomes_project 7 101237352 101237516 + Gm23040 snRNA snRNA MGP_129S1SvImJ_T0081270.1 MGP_129S1SvImJ_G0031534.1 mouse_genomes_project 7 813148 826413 - MGP_129S1SvImJ_P0081270 protein_coding protein_coding MGP_129S1SvImJ_T0081446.1 MGP_129S1SvImJ_G0031569.1 mouse_genomes_project 7 1875614 1878362 + MGP_129S1SvImJ_P0081446 Nat14 protein_coding protein_coding MGP_129S1SvImJ_T0085773.1 MGP_129S1SvImJ_G0032816.1 mouse_genomes_project 7 111717835 111718780 - MGP_129S1SvImJ_P0085773 Olfr493 protein_coding protein_coding MGP_129S1SvImJ_T0085490.1 MGP_129S1SvImJ_G0032659.1 mouse_genomes_project 7 106585763 106586723 + MGP_129S1SvImJ_P0085490 Olfr606 protein_coding protein_coding MGP_129S1SvImJ_T0005188.1 MGP_129S1SvImJ_G0004421.1 mouse_genomes_project 7 23681055 23682627 + 9130221H12Rik antisense antisense MGP_129S1SvImJ_T0005189.1 MGP_129S1SvImJ_G0004421.1 mouse_genomes_project 7 23681091 23682633 + 9130221H12Rik antisense antisense MGP_129S1SvImJ_T0084539.1 MGP_129S1SvImJ_G0032390.1 mouse_genomes_project 7 81486954 81515212 - MGP_129S1SvImJ_P0084539 Rhcg protein_coding unknown_likely_coding MGP_129S1SvImJ_T0084540.1 MGP_129S1SvImJ_G0032390.1 mouse_genomes_project 7 81486956 81515343 - MGP_129S1SvImJ_P0084540 Rhcg protein_coding protein_coding MGP_129S1SvImJ_T0084541.1 MGP_129S1SvImJ_G0032390.1 mouse_genomes_project 7 81486962 81488523 - MGP_129S1SvImJ_P0084541 Rhcg protein_coding protein_coding MGP_129S1SvImJ_T0084542.1 MGP_129S1SvImJ_G0032390.1 mouse_genomes_project 7 81499715 81503822 - MGP_129S1SvImJ_P0084542 Rhcg protein_coding protein_coding MGP_129S1SvImJ_T0102799.1 MGP_129S1SvImJ_G0040631.1 mouse_genomes_project 7 105606283 105607218 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0100053.1 MGP_129S1SvImJ_G0038120.1 mouse_genomes_project 7 45499657 45499759 - Gm23585 snRNA snRNA MGP_129S1SvImJ_T0010845.1 MGP_129S1SvImJ_G0008961.1 mouse_genomes_project 7 95871 95948 + Mir291b miRNA miRNA MGP_129S1SvImJ_T0015772.1 MGP_129S1SvImJ_G0013861.1 mouse_genomes_project 7 33051524 33052283 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011722.1 MGP_129S1SvImJ_G0009838.1 mouse_genomes_project 7 148556423 148556618 + Gm27389 misc_RNA misc_RNA MGP_129S1SvImJ_T0085129.1 MGP_129S1SvImJ_G0032544.1 mouse_genomes_project 7 101647613 101913740 - MGP_129S1SvImJ_P0085129 Uvrag protein_coding protein_coding MGP_129S1SvImJ_T0082402.1 MGP_129S1SvImJ_G0031885.1 mouse_genomes_project 7 24870963 24947019 - MGP_129S1SvImJ_P0082402 Nlrp9c protein_coding protein_coding MGP_129S1SvImJ_T0082403.1 MGP_129S1SvImJ_G0031885.1 mouse_genomes_project 7 24917560 24947024 - MGP_129S1SvImJ_P0082403 Nlrp9c protein_coding protein_coding MGP_129S1SvImJ_T0082404.1 MGP_129S1SvImJ_G0031885.1 mouse_genomes_project 7 24929621 24956496 - Nlrp9c protein_coding retained_intron MGP_129S1SvImJ_T0082405.1 MGP_129S1SvImJ_G0031885.1 mouse_genomes_project 7 24929621 24956492 - Nlrp9c protein_coding processed_transcript MGP_129S1SvImJ_T0082406.1 MGP_129S1SvImJ_G0031885.1 mouse_genomes_project 7 24945047 24956496 - Nlrp9c protein_coding retained_intron MGP_129S1SvImJ_T0084150.1 MGP_129S1SvImJ_G0032316.1 mouse_genomes_project 7 56857987 56875587 + MGP_129S1SvImJ_P0084150 Herc2 protein_coding protein_coding MGP_129S1SvImJ_T0084151.1 MGP_129S1SvImJ_G0032316.1 mouse_genomes_project 7 56858044 57037424 + MGP_129S1SvImJ_P0084151 Herc2 protein_coding protein_coding MGP_129S1SvImJ_T0084152.1 MGP_129S1SvImJ_G0032316.1 mouse_genomes_project 7 56858180 57037387 + MGP_129S1SvImJ_P0084152 Herc2 protein_coding protein_coding MGP_129S1SvImJ_T0084153.1 MGP_129S1SvImJ_G0032316.1 mouse_genomes_project 7 56858557 56917508 + MGP_129S1SvImJ_P0084153 Herc2 protein_coding protein_coding MGP_129S1SvImJ_T0084154.1 MGP_129S1SvImJ_G0032316.1 mouse_genomes_project 7 56858669 57036756 + MGP_129S1SvImJ_P0084154 Herc2 protein_coding protein_coding MGP_129S1SvImJ_T0084155.1 MGP_129S1SvImJ_G0032316.1 mouse_genomes_project 7 56858739 56880535 + Herc2 protein_coding retained_intron MGP_129S1SvImJ_T0084156.1 MGP_129S1SvImJ_G0032316.1 mouse_genomes_project 7 56964996 56970632 + Herc2 protein_coding processed_transcript MGP_129S1SvImJ_T0084157.1 MGP_129S1SvImJ_G0032316.1 mouse_genomes_project 7 57026123 57036725 + MGP_129S1SvImJ_P0084157 Herc2 protein_coding protein_coding MGP_129S1SvImJ_T0081534.1 MGP_129S1SvImJ_G0031613.1 mouse_genomes_project 7 3763809 3788736 - MGP_129S1SvImJ_P0081534 Zim1 protein_coding protein_coding MGP_129S1SvImJ_T0081535.1 MGP_129S1SvImJ_G0031613.1 mouse_genomes_project 7 3768345 3788715 - MGP_129S1SvImJ_P0081535 Zim1 protein_coding protein_coding MGP_129S1SvImJ_T0081536.1 MGP_129S1SvImJ_G0031613.1 mouse_genomes_project 7 3769261 3781011 - MGP_129S1SvImJ_P0081536 Zim1 protein_coding protein_coding MGP_129S1SvImJ_T0086711.1 MGP_129S1SvImJ_G0033022.1 mouse_genomes_project 7 131455538 131462094 - MGP_129S1SvImJ_P0086711 Spn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086712.1 MGP_129S1SvImJ_G0033022.1 mouse_genomes_project 7 131456776 131460846 - MGP_129S1SvImJ_P0086712 Spn protein_coding protein_coding MGP_129S1SvImJ_T0086713.1 MGP_129S1SvImJ_G0033022.1 mouse_genomes_project 7 131457008 131462103 - MGP_129S1SvImJ_P0086713 Spn protein_coding protein_coding MGP_129S1SvImJ_T0084739.1 MGP_129S1SvImJ_G0032425.1 mouse_genomes_project 7 83147202 83206590 + MGP_129S1SvImJ_P0084739 Slc28a1 protein_coding protein_coding MGP_129S1SvImJ_T0084740.1 MGP_129S1SvImJ_G0032425.1 mouse_genomes_project 7 83147257 83206590 + MGP_129S1SvImJ_P0084740 Slc28a1 protein_coding protein_coding MGP_129S1SvImJ_T0008847.1 MGP_129S1SvImJ_G0007150.1 mouse_genomes_project 7 35521891 35525032 + Gm45143 lincRNA lincRNA MGP_129S1SvImJ_T0086372.1 MGP_129S1SvImJ_G0032967.1 mouse_genomes_project 7 129678711 129703438 - MGP_129S1SvImJ_P0086372 Nsmce1 protein_coding protein_coding MGP_129S1SvImJ_T0086373.1 MGP_129S1SvImJ_G0032967.1 mouse_genomes_project 7 129682182 129703241 - MGP_129S1SvImJ_P0086373 Nsmce1 protein_coding protein_coding MGP_129S1SvImJ_T0086374.1 MGP_129S1SvImJ_G0032967.1 mouse_genomes_project 7 129682236 129689629 - Nsmce1 protein_coding processed_transcript MGP_129S1SvImJ_T0085469.1 MGP_129S1SvImJ_G0032640.1 mouse_genomes_project 7 106182468 106183355 + MGP_129S1SvImJ_P0085469 protein_coding protein_coding MGP_129S1SvImJ_T0083937.1 MGP_129S1SvImJ_G0032256.1 mouse_genomes_project 7 46250208 46258291 + MGP_129S1SvImJ_P0083937 Ccdc114 protein_coding protein_coding MGP_129S1SvImJ_T0083938.1 MGP_129S1SvImJ_G0032256.1 mouse_genomes_project 7 46250352 46251204 + Ccdc114 protein_coding retained_intron MGP_129S1SvImJ_T0083939.1 MGP_129S1SvImJ_G0032256.1 mouse_genomes_project 7 46250379 46258297 + MGP_129S1SvImJ_P0083939 Ccdc114 protein_coding protein_coding MGP_129S1SvImJ_T0083940.1 MGP_129S1SvImJ_G0032256.1 mouse_genomes_project 7 46250379 46263209 + MGP_129S1SvImJ_P0083940 Ccdc114 protein_coding protein_coding MGP_129S1SvImJ_T0083941.1 MGP_129S1SvImJ_G0032256.1 mouse_genomes_project 7 46250656 46275364 + MGP_129S1SvImJ_P0083941 Ccdc114 protein_coding protein_coding MGP_129S1SvImJ_T0081879.1 MGP_129S1SvImJ_G0031745.1 mouse_genomes_project 7 16759422 16781588 + MGP_129S1SvImJ_P0081879 Mill2 protein_coding protein_coding MGP_129S1SvImJ_T0081880.1 MGP_129S1SvImJ_G0031745.1 mouse_genomes_project 7 16759445 16786768 + MGP_129S1SvImJ_P0081880 Mill2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081881.1 MGP_129S1SvImJ_G0031745.1 mouse_genomes_project 7 16759448 16789070 + MGP_129S1SvImJ_P0081881 Mill2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0081882.1 MGP_129S1SvImJ_G0031745.1 mouse_genomes_project 7 16759457 16779244 + Mill2 protein_coding processed_transcript MGP_129S1SvImJ_T0083329.1 MGP_129S1SvImJ_G0032095.1 mouse_genomes_project 7 35086414 35156288 - MGP_129S1SvImJ_P0083329 Dpy19l3 protein_coding protein_coding MGP_129S1SvImJ_T0083330.1 MGP_129S1SvImJ_G0032095.1 mouse_genomes_project 7 35091974 35109386 - MGP_129S1SvImJ_P0083330 Dpy19l3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083331.1 MGP_129S1SvImJ_G0032095.1 mouse_genomes_project 7 35108517 35109859 - Dpy19l3 protein_coding retained_intron MGP_129S1SvImJ_T0083332.1 MGP_129S1SvImJ_G0032095.1 mouse_genomes_project 7 35108926 35109945 - Dpy19l3 protein_coding retained_intron MGP_129S1SvImJ_T0083333.1 MGP_129S1SvImJ_G0032095.1 mouse_genomes_project 7 35115453 35130929 - MGP_129S1SvImJ_P0083333 Dpy19l3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0083334.1 MGP_129S1SvImJ_G0032095.1 mouse_genomes_project 7 35117261 35124861 - Dpy19l3 protein_coding retained_intron MGP_129S1SvImJ_T0083335.1 MGP_129S1SvImJ_G0032095.1 mouse_genomes_project 7 35120830 35126653 - Dpy19l3 protein_coding processed_transcript MGP_129S1SvImJ_T0083336.1 MGP_129S1SvImJ_G0032095.1 mouse_genomes_project 7 35126667 35130973 - Dpy19l3 protein_coding retained_intron MGP_129S1SvImJ_T0083337.1 MGP_129S1SvImJ_G0032095.1 mouse_genomes_project 7 35130874 35156233 - Dpy19l3 protein_coding processed_transcript MGP_129S1SvImJ_T0083338.1 MGP_129S1SvImJ_G0032095.1 mouse_genomes_project 7 35153154 35156189 - Dpy19l3 protein_coding retained_intron MGP_129S1SvImJ_T0085070.1 MGP_129S1SvImJ_G0032533.1 mouse_genomes_project 7 100770698 100845113 - MGP_129S1SvImJ_P0085070 Myo7a protein_coding protein_coding MGP_129S1SvImJ_T0085071.1 MGP_129S1SvImJ_G0032533.1 mouse_genomes_project 7 100770706 100846904 - MGP_129S1SvImJ_P0085071 Myo7a protein_coding protein_coding MGP_129S1SvImJ_T0085072.1 MGP_129S1SvImJ_G0032533.1 mouse_genomes_project 7 100770709 100789326 - MGP_129S1SvImJ_P0085072 Myo7a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085073.1 MGP_129S1SvImJ_G0032533.1 mouse_genomes_project 7 100771047 100835225 - MGP_129S1SvImJ_P0085073 Myo7a protein_coding protein_coding MGP_129S1SvImJ_T0085074.1 MGP_129S1SvImJ_G0032533.1 mouse_genomes_project 7 100782223 100785158 - Myo7a protein_coding retained_intron MGP_129S1SvImJ_T0085075.1 MGP_129S1SvImJ_G0032533.1 mouse_genomes_project 7 100801105 100810690 - Myo7a protein_coding processed_transcript MGP_129S1SvImJ_T0085076.1 MGP_129S1SvImJ_G0032533.1 mouse_genomes_project 7 100823649 100838604 - Myo7a protein_coding processed_transcript MGP_129S1SvImJ_T0085077.1 MGP_129S1SvImJ_G0032533.1 mouse_genomes_project 7 100824224 100829362 - Myo7a protein_coding processed_transcript MGP_129S1SvImJ_T0085078.1 MGP_129S1SvImJ_G0032533.1 mouse_genomes_project 7 100824264 100829361 - Myo7a protein_coding processed_transcript MGP_129S1SvImJ_T0085079.1 MGP_129S1SvImJ_G0032533.1 mouse_genomes_project 7 100824273 100846873 - MGP_129S1SvImJ_P0085079 Myo7a protein_coding protein_coding MGP_129S1SvImJ_T0085080.1 MGP_129S1SvImJ_G0032533.1 mouse_genomes_project 7 100834709 100846872 - Myo7a protein_coding processed_transcript MGP_129S1SvImJ_T0081883.1 MGP_129S1SvImJ_G0031746.1 mouse_genomes_project 7 16794738 16816650 + Pglyrp1 protein_coding processed_transcript MGP_129S1SvImJ_T0081884.1 MGP_129S1SvImJ_G0031746.1 mouse_genomes_project 7 16794738 16817711 + Pglyrp1 protein_coding processed_transcript MGP_129S1SvImJ_T0081885.1 MGP_129S1SvImJ_G0031746.1 mouse_genomes_project 7 16808358 16817693 + MGP_129S1SvImJ_P0081885 Pglyrp1 protein_coding protein_coding MGP_129S1SvImJ_T0081886.1 MGP_129S1SvImJ_G0031746.1 mouse_genomes_project 7 16808371 16809319 + Pglyrp1 protein_coding retained_intron MGP_129S1SvImJ_T0005184.1 MGP_129S1SvImJ_G0004417.1 mouse_genomes_project 7 17975840 17985576 + Gm16251 antisense antisense MGP_129S1SvImJ_T0002330.1 MGP_129S1SvImJ_G0002241.1 mouse_genomes_project 7 131246066 131247817 + TEC TEC MGP_129S1SvImJ_T0085835.1 MGP_129S1SvImJ_G0032849.1 mouse_genomes_project 7 113248701 113316759 - MGP_129S1SvImJ_P0085835 Scube2 protein_coding protein_coding MGP_129S1SvImJ_T0085836.1 MGP_129S1SvImJ_G0032849.1 mouse_genomes_project 7 113248701 113316852 - MGP_129S1SvImJ_P0085836 Scube2 protein_coding protein_coding MGP_129S1SvImJ_T0085837.1 MGP_129S1SvImJ_G0032849.1 mouse_genomes_project 7 113248833 113316816 - MGP_129S1SvImJ_P0085837 Scube2 protein_coding protein_coding MGP_129S1SvImJ_T0085838.1 MGP_129S1SvImJ_G0032849.1 mouse_genomes_project 7 113249089 113292353 - Scube2 protein_coding processed_transcript MGP_129S1SvImJ_T0085839.1 MGP_129S1SvImJ_G0032849.1 mouse_genomes_project 7 113250645 113258227 - Scube2 protein_coding processed_transcript MGP_129S1SvImJ_T0005218.1 MGP_129S1SvImJ_G0004443.1 mouse_genomes_project 7 34404809 34405162 + Gm45095 antisense antisense MGP_129S1SvImJ_T0005261.1 MGP_129S1SvImJ_G0004473.1 mouse_genomes_project 7 82620057 82628395 + Gm15880 antisense antisense MGP_129S1SvImJ_T0015693.1 MGP_129S1SvImJ_G0013782.1 mouse_genomes_project 7 182499 183379 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009050.1 MGP_129S1SvImJ_G0007284.1 mouse_genomes_project 7 134322358 134344207 + Gm44778 lincRNA lincRNA MGP_129S1SvImJ_T0005340.1 MGP_129S1SvImJ_G0004529.1 mouse_genomes_project 7 149930744 149946507 + Faddos antisense antisense MGP_129S1SvImJ_T0002216.1 MGP_129S1SvImJ_G0002128.1 mouse_genomes_project 7 240597 240932 + TEC TEC MGP_129S1SvImJ_T0087356.1 MGP_129S1SvImJ_G0033160.1 mouse_genomes_project 7 145124026 145126959 - MGP_129S1SvImJ_P0087356 Msx3 protein_coding protein_coding MGP_129S1SvImJ_T0087357.1 MGP_129S1SvImJ_G0033160.1 mouse_genomes_project 7 145124243 145126958 - MGP_129S1SvImJ_P0087357 Msx3 protein_coding protein_coding MGP_129S1SvImJ_T0005217.1 MGP_129S1SvImJ_G0004442.1 mouse_genomes_project 7 33965257 33974418 + Gm12781 antisense antisense MGP_129S1SvImJ_T0081482.1 MGP_129S1SvImJ_G0031587.1 mouse_genomes_project 7 2123908 2125192 - MGP_129S1SvImJ_P0081482 Vmn1r55 protein_coding protein_coding MGP_129S1SvImJ_T0010850.1 MGP_129S1SvImJ_G0008966.1 mouse_genomes_project 7 581410 581496 + Mir3572 miRNA miRNA MGP_129S1SvImJ_T0081674.1 MGP_129S1SvImJ_G0031672.1 mouse_genomes_project 7 10721763 10753365 + MGP_129S1SvImJ_P0081674 Pla2g4c protein_coding protein_coding MGP_129S1SvImJ_T0081675.1 MGP_129S1SvImJ_G0031672.1 mouse_genomes_project 7 10722775 10754677 + MGP_129S1SvImJ_P0081675 Pla2g4c protein_coding protein_coding MGP_129S1SvImJ_T0081676.1 MGP_129S1SvImJ_G0031672.1 mouse_genomes_project 7 10724978 10754681 + MGP_129S1SvImJ_P0081676 Pla2g4c protein_coding protein_coding MGP_129S1SvImJ_T0085011.1 MGP_129S1SvImJ_G0032521.1 mouse_genomes_project 7 100013374 100032751 + MGP_129S1SvImJ_P0085011 Kctd21 protein_coding protein_coding MGP_129S1SvImJ_T0015805.1 MGP_129S1SvImJ_G0013894.1 mouse_genomes_project 7 43523362 43523915 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102668.1 MGP_129S1SvImJ_G0040501.1 mouse_genomes_project 7 7550931 7551827 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0083738.1 MGP_129S1SvImJ_G0032208.1 mouse_genomes_project 7 45420336 45441447 - MGP_129S1SvImJ_P0083738 Ccdc155 protein_coding protein_coding MGP_129S1SvImJ_T0083739.1 MGP_129S1SvImJ_G0032208.1 mouse_genomes_project 7 45420640 45426753 - Ccdc155 protein_coding retained_intron MGP_129S1SvImJ_T0085770.1 MGP_129S1SvImJ_G0032813.1 mouse_genomes_project 7 111622431 111637598 - MGP_129S1SvImJ_P0085770 Olfr488 protein_coding protein_coding MGP_129S1SvImJ_T0082336.1 MGP_129S1SvImJ_G0031869.1 mouse_genomes_project 7 24115101 24116374 - MGP_129S1SvImJ_P0082336 Erich4 protein_coding protein_coding MGP_129S1SvImJ_T0086243.1 MGP_129S1SvImJ_G0032939.1 mouse_genomes_project 7 125053722 125096980 + MGP_129S1SvImJ_P0086243 Mettl9 protein_coding protein_coding MGP_129S1SvImJ_T0086753.1 MGP_129S1SvImJ_G0033031.1 mouse_genomes_project 7 131638326 131682540 + MGP_129S1SvImJ_P0086753 Itgal protein_coding protein_coding MGP_129S1SvImJ_T0086754.1 MGP_129S1SvImJ_G0033031.1 mouse_genomes_project 7 131638357 131682541 + MGP_129S1SvImJ_P0086754 Itgal protein_coding protein_coding MGP_129S1SvImJ_T0086755.1 MGP_129S1SvImJ_G0033031.1 mouse_genomes_project 7 131638381 131678694 + MGP_129S1SvImJ_P0086755 Itgal protein_coding protein_coding MGP_129S1SvImJ_T0086756.1 MGP_129S1SvImJ_G0033031.1 mouse_genomes_project 7 131638476 131681131 + MGP_129S1SvImJ_P0086756 Itgal protein_coding protein_coding MGP_129S1SvImJ_T0086757.1 MGP_129S1SvImJ_G0033031.1 mouse_genomes_project 7 131639496 131641642 + Itgal protein_coding processed_transcript MGP_129S1SvImJ_T0086758.1 MGP_129S1SvImJ_G0033031.1 mouse_genomes_project 7 131653403 131682540 + MGP_129S1SvImJ_P0086758 Itgal protein_coding protein_coding MGP_129S1SvImJ_T0084092.1 MGP_129S1SvImJ_G0032305.1 mouse_genomes_project 7 52369151 52418388 + MGP_129S1SvImJ_P0084092 Slc17a6 protein_coding protein_coding MGP_129S1SvImJ_T0086966.1 MGP_129S1SvImJ_G0033073.1 mouse_genomes_project 7 132560057 132561965 + MGP_129S1SvImJ_P0086966 Slc25a51 protein_coding protein_coding MGP_129S1SvImJ_T0086967.1 MGP_129S1SvImJ_G0033073.1 mouse_genomes_project 7 132560057 132563615 + MGP_129S1SvImJ_P0086967 Slc25a51 protein_coding protein_coding MGP_129S1SvImJ_T0085729.1 MGP_129S1SvImJ_G0032779.1 mouse_genomes_project 7 110232067 110233018 - MGP_129S1SvImJ_P0085729 protein_coding protein_coding MGP_129S1SvImJ_T0082763.1 MGP_129S1SvImJ_G0031980.1 mouse_genomes_project 7 28166834 28197736 - MGP_129S1SvImJ_P0082763 Spint2 protein_coding protein_coding MGP_129S1SvImJ_T0082764.1 MGP_129S1SvImJ_G0031980.1 mouse_genomes_project 7 28166834 28197736 - MGP_129S1SvImJ_P0082764 Spint2 protein_coding protein_coding MGP_129S1SvImJ_T0081422.1 MGP_129S1SvImJ_G0031560.1 mouse_genomes_project 7 1711629 1717400 - MGP_129S1SvImJ_P0081422 Il11 protein_coding protein_coding MGP_129S1SvImJ_T0081423.1 MGP_129S1SvImJ_G0031560.1 mouse_genomes_project 7 1712494 1722124 - MGP_129S1SvImJ_P0081423 Il11 protein_coding protein_coding MGP_129S1SvImJ_T0102760.1 MGP_129S1SvImJ_G0040592.1 mouse_genomes_project 7 48685434 48686383 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0018461.1 MGP_129S1SvImJ_G0015697.1 mouse_genomes_project 7 139004206 139007439 - A130023I24Rik processed_transcript sense_intronic MGP_129S1SvImJ_T0018462.1 MGP_129S1SvImJ_G0015697.1 mouse_genomes_project 7 139004285 139006052 - A130023I24Rik processed_transcript retained_intron MGP_129S1SvImJ_T0087722.1 MGP_129S1SvImJ_G0033257.1 mouse_genomes_project 7 147717848 147751906 + MGP_129S1SvImJ_P0087722 Lsp1 protein_coding protein_coding MGP_129S1SvImJ_T0087723.1 MGP_129S1SvImJ_G0033257.1 mouse_genomes_project 7 147717885 147751906 + MGP_129S1SvImJ_P0087723 Lsp1 protein_coding protein_coding MGP_129S1SvImJ_T0087724.1 MGP_129S1SvImJ_G0033257.1 mouse_genomes_project 7 147717903 147751642 + MGP_129S1SvImJ_P0087724 Lsp1 protein_coding protein_coding MGP_129S1SvImJ_T0087725.1 MGP_129S1SvImJ_G0033257.1 mouse_genomes_project 7 147728882 147751638 + MGP_129S1SvImJ_P0087725 Lsp1 protein_coding protein_coding MGP_129S1SvImJ_T0087726.1 MGP_129S1SvImJ_G0033257.1 mouse_genomes_project 7 147728911 147745410 + Lsp1 protein_coding retained_intron MGP_129S1SvImJ_T0087727.1 MGP_129S1SvImJ_G0033257.1 mouse_genomes_project 7 147729190 147751639 + MGP_129S1SvImJ_P0087727 Lsp1 protein_coding protein_coding MGP_129S1SvImJ_T0087728.1 MGP_129S1SvImJ_G0033257.1 mouse_genomes_project 7 147732033 147743543 + Lsp1 protein_coding processed_transcript MGP_129S1SvImJ_T0087729.1 MGP_129S1SvImJ_G0033257.1 mouse_genomes_project 7 147734052 147751906 + Lsp1 protein_coding processed_transcript MGP_129S1SvImJ_T0087730.1 MGP_129S1SvImJ_G0033257.1 mouse_genomes_project 7 147740297 147747022 + Lsp1 protein_coding processed_transcript MGP_129S1SvImJ_T0087731.1 MGP_129S1SvImJ_G0033257.1 mouse_genomes_project 7 147740442 147743519 + Lsp1 protein_coding processed_transcript MGP_129S1SvImJ_T0087732.1 MGP_129S1SvImJ_G0033257.1 mouse_genomes_project 7 147746055 147747461 + Lsp1 protein_coding retained_intron MGP_129S1SvImJ_T0087733.1 MGP_129S1SvImJ_G0033257.1 mouse_genomes_project 7 147746851 147751556 + Lsp1 protein_coding retained_intron MGP_129S1SvImJ_T0099002.1 MGP_129S1SvImJ_G0037076.1 mouse_genomes_project 7 120022951 120025674 - sense_intronic sense_intronic MGP_129S1SvImJ_T0099003.1 MGP_129S1SvImJ_G0037076.1 mouse_genomes_project 7 120022951 120025816 - sense_intronic sense_intronic MGP_129S1SvImJ_T0002226.1 MGP_129S1SvImJ_G0002138.1 mouse_genomes_project 7 33511297 33512390 - TEC TEC MGP_129S1SvImJ_T0081786.1 MGP_129S1SvImJ_G0031713.1 mouse_genomes_project 7 14392537 14397190 - MGP_129S1SvImJ_P0081786 Ceacam15 protein_coding protein_coding MGP_129S1SvImJ_T0084082.1 MGP_129S1SvImJ_G0032301.1 mouse_genomes_project 7 50596599 50656882 + MGP_129S1SvImJ_P0084082 Slc6a5 protein_coding protein_coding MGP_129S1SvImJ_T0084083.1 MGP_129S1SvImJ_G0032301.1 mouse_genomes_project 7 50598153 50652502 + MGP_129S1SvImJ_P0084083 Slc6a5 protein_coding protein_coding MGP_129S1SvImJ_T0015882.1 MGP_129S1SvImJ_G0013971.1 mouse_genomes_project 7 101183316 101183876 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005275.1 MGP_129S1SvImJ_G0004482.1 mouse_genomes_project 7 99481698 99491815 - Gm15413 antisense antisense MGP_129S1SvImJ_T0083089.1 MGP_129S1SvImJ_G0032051.1 mouse_genomes_project 7 29961379 29964025 - MGP_129S1SvImJ_P0083089 protein_coding protein_coding MGP_129S1SvImJ_T0005339.1 MGP_129S1SvImJ_G0004528.1 mouse_genomes_project 7 149721790 149762961 - Gm14372 antisense antisense MGP_129S1SvImJ_T0010875.1 MGP_129S1SvImJ_G0008991.1 mouse_genomes_project 7 28698656 28698739 + Mir1964 miRNA miRNA MGP_129S1SvImJ_T0084818.1 MGP_129S1SvImJ_G0032449.1 mouse_genomes_project 7 85745450 85781654 + Tmc3 protein_coding retained_intron MGP_129S1SvImJ_T0084819.1 MGP_129S1SvImJ_G0032449.1 mouse_genomes_project 7 85745454 85752374 + Tmc3 protein_coding retained_intron MGP_129S1SvImJ_T0084820.1 MGP_129S1SvImJ_G0032449.1 mouse_genomes_project 7 85745454 85789157 + MGP_129S1SvImJ_P0084820 Tmc3 protein_coding protein_coding MGP_129S1SvImJ_T0084821.1 MGP_129S1SvImJ_G0032449.1 mouse_genomes_project 7 85745615 85786494 + MGP_129S1SvImJ_P0084821 Tmc3 protein_coding protein_coding MGP_129S1SvImJ_T0084822.1 MGP_129S1SvImJ_G0032449.1 mouse_genomes_project 7 85758034 85759408 + Tmc3 protein_coding retained_intron MGP_129S1SvImJ_T0015796.1 MGP_129S1SvImJ_G0013885.1 mouse_genomes_project 7 42416787 42418522 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101965.1 MGP_129S1SvImJ_G0039845.1 mouse_genomes_project 7 12131565 12203096 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0005202.1 MGP_129S1SvImJ_G0004430.1 mouse_genomes_project 7 29457323 29460708 - Nphs1os antisense antisense MGP_129S1SvImJ_T0086026.1 MGP_129S1SvImJ_G0032888.1 mouse_genomes_project 7 119821747 119832890 + MGP_129S1SvImJ_P0086026 1110004F10Rik protein_coding protein_coding MGP_129S1SvImJ_T0086027.1 MGP_129S1SvImJ_G0032888.1 mouse_genomes_project 7 119821785 119834574 + MGP_129S1SvImJ_P0086027 1110004F10Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084344.1 MGP_129S1SvImJ_G0032358.1 mouse_genomes_project 7 68480079 68624635 - MGP_129S1SvImJ_P0084344 Mef2a protein_coding protein_coding MGP_129S1SvImJ_T0084345.1 MGP_129S1SvImJ_G0032358.1 mouse_genomes_project 7 68480834 68624635 - MGP_129S1SvImJ_P0084345 Mef2a protein_coding protein_coding MGP_129S1SvImJ_T0084346.1 MGP_129S1SvImJ_G0032358.1 mouse_genomes_project 7 68481000 68566779 - MGP_129S1SvImJ_P0084346 Mef2a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084347.1 MGP_129S1SvImJ_G0032358.1 mouse_genomes_project 7 68482955 68624635 - MGP_129S1SvImJ_P0084347 Mef2a protein_coding protein_coding MGP_129S1SvImJ_T0084348.1 MGP_129S1SvImJ_G0032358.1 mouse_genomes_project 7 68484378 68624635 - MGP_129S1SvImJ_P0084348 Mef2a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084349.1 MGP_129S1SvImJ_G0032358.1 mouse_genomes_project 7 68484438 68624635 - MGP_129S1SvImJ_P0084349 Mef2a protein_coding protein_coding MGP_129S1SvImJ_T0084350.1 MGP_129S1SvImJ_G0032358.1 mouse_genomes_project 7 68502024 68624635 - MGP_129S1SvImJ_P0084350 Mef2a protein_coding protein_coding MGP_129S1SvImJ_T0084351.1 MGP_129S1SvImJ_G0032358.1 mouse_genomes_project 7 68601224 68624604 - Mef2a protein_coding processed_transcript MGP_129S1SvImJ_T0087567.1 MGP_129S1SvImJ_G0033227.1 mouse_genomes_project 7 146595271 146601227 - Pddc1 protein_coding retained_intron MGP_129S1SvImJ_T0087568.1 MGP_129S1SvImJ_G0033227.1 mouse_genomes_project 7 146595320 146596468 - Pddc1 protein_coding retained_intron MGP_129S1SvImJ_T0087569.1 MGP_129S1SvImJ_G0033227.1 mouse_genomes_project 7 146595320 146601273 - MGP_129S1SvImJ_P0087569 Pddc1 protein_coding protein_coding MGP_129S1SvImJ_T0087570.1 MGP_129S1SvImJ_G0033227.1 mouse_genomes_project 7 146595322 146601215 - Pddc1 protein_coding retained_intron MGP_129S1SvImJ_T0087571.1 MGP_129S1SvImJ_G0033227.1 mouse_genomes_project 7 146597980 146601202 - Pddc1 protein_coding retained_intron MGP_129S1SvImJ_T0087572.1 MGP_129S1SvImJ_G0033227.1 mouse_genomes_project 7 146598687 146601213 - Pddc1 protein_coding retained_intron MGP_129S1SvImJ_T0015862.1 MGP_129S1SvImJ_G0013951.1 mouse_genomes_project 7 87446314 87446960 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0082380.1 MGP_129S1SvImJ_G0031878.1 mouse_genomes_project 7 24231396 24266095 - MGP_129S1SvImJ_P0082380 Hnrnpul1 protein_coding protein_coding MGP_129S1SvImJ_T0082381.1 MGP_129S1SvImJ_G0031878.1 mouse_genomes_project 7 24248131 24266161 - MGP_129S1SvImJ_P0082381 Hnrnpul1 protein_coding protein_coding MGP_129S1SvImJ_T0082382.1 MGP_129S1SvImJ_G0031878.1 mouse_genomes_project 7 24250820 24253046 - Hnrnpul1 protein_coding retained_intron MGP_129S1SvImJ_T0082383.1 MGP_129S1SvImJ_G0031878.1 mouse_genomes_project 7 24253221 24255836 - Hnrnpul1 protein_coding retained_intron MGP_129S1SvImJ_T0087495.1 MGP_129S1SvImJ_G0033213.1 mouse_genomes_project 7 146334827 146343436 - MGP_129S1SvImJ_P0087495 Rnh1 protein_coding protein_coding MGP_129S1SvImJ_T0087496.1 MGP_129S1SvImJ_G0033213.1 mouse_genomes_project 7 146334827 146347351 - MGP_129S1SvImJ_P0087496 Rnh1 protein_coding protein_coding MGP_129S1SvImJ_T0009013.1 MGP_129S1SvImJ_G0007260.1 mouse_genomes_project 7 125286670 125325136 + Gm45079 lincRNA lincRNA MGP_129S1SvImJ_T0083489.1 MGP_129S1SvImJ_G0032138.1 mouse_genomes_project 7 43749179 43764137 + MGP_129S1SvImJ_P0083489 Klk13 protein_coding protein_coding MGP_129S1SvImJ_T0083490.1 MGP_129S1SvImJ_G0032138.1 mouse_genomes_project 7 43750011 43757914 + MGP_129S1SvImJ_P0083490 Klk13 protein_coding protein_coding MGP_129S1SvImJ_T0083491.1 MGP_129S1SvImJ_G0032138.1 mouse_genomes_project 7 43751571 43760470 + MGP_129S1SvImJ_P0083491 Klk13 protein_coding protein_coding MGP_129S1SvImJ_T0082472.1 MGP_129S1SvImJ_G0031905.1 mouse_genomes_project 7 25887247 25895605 + Numbl protein_coding processed_transcript MGP_129S1SvImJ_T0082473.1 MGP_129S1SvImJ_G0031905.1 mouse_genomes_project 7 25887539 25911896 + MGP_129S1SvImJ_P0082473 Numbl protein_coding protein_coding MGP_129S1SvImJ_T0082474.1 MGP_129S1SvImJ_G0031905.1 mouse_genomes_project 7 25887597 25893762 + Numbl protein_coding processed_transcript MGP_129S1SvImJ_T0082475.1 MGP_129S1SvImJ_G0031905.1 mouse_genomes_project 7 25887620 25911899 + Numbl protein_coding retained_intron MGP_129S1SvImJ_T0082476.1 MGP_129S1SvImJ_G0031905.1 mouse_genomes_project 7 25890174 25911736 + Numbl protein_coding retained_intron MGP_129S1SvImJ_T0008983.1 MGP_129S1SvImJ_G0007244.1 mouse_genomes_project 7 102437364 102440562 + Gm10605 lincRNA lincRNA MGP_129S1SvImJ_T0008984.1 MGP_129S1SvImJ_G0007244.1 mouse_genomes_project 7 102437567 102443135 + Gm10605 lincRNA lincRNA MGP_129S1SvImJ_T0085830.1 MGP_129S1SvImJ_G0032846.1 mouse_genomes_project 7 113170600 113174820 - MGP_129S1SvImJ_P0085830 Ascl3 protein_coding protein_coding MGP_129S1SvImJ_T0008806.1 MGP_129S1SvImJ_G0007113.1 mouse_genomes_project 7 371980 395294 + Gm44160 lincRNA lincRNA MGP_129S1SvImJ_T0102733.1 MGP_129S1SvImJ_G0040565.1 mouse_genomes_project 7 34835492 34838164 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0086751.1 MGP_129S1SvImJ_G0033029.1 mouse_genomes_project 7 131594472 131598223 - MGP_129S1SvImJ_P0086751 Dctpp1 protein_coding protein_coding MGP_129S1SvImJ_T0015753.1 MGP_129S1SvImJ_G0013842.1 mouse_genomes_project 7 23891372 23892046 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0083713.1 MGP_129S1SvImJ_G0032194.1 mouse_genomes_project 7 45243691 45249099 + MGP_129S1SvImJ_P0083713 Rras protein_coding unknown_likely_coding MGP_129S1SvImJ_T0086686.1 MGP_129S1SvImJ_G0033016.1 mouse_genomes_project 7 131331722 131335403 - MGP_129S1SvImJ_P0086686 Prrt2 protein_coding protein_coding MGP_129S1SvImJ_T0086687.1 MGP_129S1SvImJ_G0033016.1 mouse_genomes_project 7 131331734 131335166 - Prrt2 protein_coding retained_intron MGP_129S1SvImJ_T0086688.1 MGP_129S1SvImJ_G0033016.1 mouse_genomes_project 7 131331839 131334094 - MGP_129S1SvImJ_P0086688 Prrt2 protein_coding protein_coding MGP_129S1SvImJ_T0086689.1 MGP_129S1SvImJ_G0033016.1 mouse_genomes_project 7 131332349 131333787 - MGP_129S1SvImJ_P0086689 Prrt2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086690.1 MGP_129S1SvImJ_G0033016.1 mouse_genomes_project 7 131332698 131335148 - Prrt2 protein_coding processed_transcript MGP_129S1SvImJ_T0086691.1 MGP_129S1SvImJ_G0033016.1 mouse_genomes_project 7 131332895 131335329 - MGP_129S1SvImJ_P0086691 Prrt2 protein_coding protein_coding MGP_129S1SvImJ_T0086692.1 MGP_129S1SvImJ_G0033016.1 mouse_genomes_project 7 131333586 131334547 - Prrt2 protein_coding processed_transcript MGP_129S1SvImJ_T0015842.1 MGP_129S1SvImJ_G0013931.1 mouse_genomes_project 7 74522788 74523788 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0081911.1 MGP_129S1SvImJ_G0031755.1 mouse_genomes_project 7 17001660 17025321 + MGP_129S1SvImJ_P0081911 Rsph6a protein_coding protein_coding MGP_129S1SvImJ_T0081912.1 MGP_129S1SvImJ_G0031755.1 mouse_genomes_project 7 17001669 17025321 + MGP_129S1SvImJ_P0081912 Rsph6a protein_coding protein_coding MGP_129S1SvImJ_T0081913.1 MGP_129S1SvImJ_G0031755.1 mouse_genomes_project 7 17004413 17016648 + Rsph6a protein_coding processed_transcript MGP_129S1SvImJ_T0002225.1 MGP_129S1SvImJ_G0002137.1 mouse_genomes_project 7 30273961 30274719 + TEC TEC MGP_129S1SvImJ_T0083753.1 MGP_129S1SvImJ_G0032211.1 mouse_genomes_project 7 45476867 45482078 - MGP_129S1SvImJ_P0083753 Cd37 protein_coding protein_coding MGP_129S1SvImJ_T0083754.1 MGP_129S1SvImJ_G0032211.1 mouse_genomes_project 7 45476872 45482053 - Cd37 protein_coding retained_intron MGP_129S1SvImJ_T0083755.1 MGP_129S1SvImJ_G0032211.1 mouse_genomes_project 7 45476876 45482353 - MGP_129S1SvImJ_P0083755 Cd37 protein_coding protein_coding MGP_129S1SvImJ_T0083756.1 MGP_129S1SvImJ_G0032211.1 mouse_genomes_project 7 45476878 45478735 - Cd37 protein_coding processed_transcript MGP_129S1SvImJ_T0083757.1 MGP_129S1SvImJ_G0032211.1 mouse_genomes_project 7 45477126 45480323 - Cd37 protein_coding processed_transcript MGP_129S1SvImJ_T0083758.1 MGP_129S1SvImJ_G0032211.1 mouse_genomes_project 7 45477405 45482112 - MGP_129S1SvImJ_P0083758 Cd37 protein_coding protein_coding MGP_129S1SvImJ_T0083759.1 MGP_129S1SvImJ_G0032211.1 mouse_genomes_project 7 45477585 45478694 - Cd37 protein_coding processed_transcript MGP_129S1SvImJ_T0083760.1 MGP_129S1SvImJ_G0032211.1 mouse_genomes_project 7 45477973 45482295 - MGP_129S1SvImJ_P0083760 Cd37 protein_coding protein_coding MGP_129S1SvImJ_T0083761.1 MGP_129S1SvImJ_G0032211.1 mouse_genomes_project 7 45480971 45482034 - Cd37 protein_coding retained_intron MGP_129S1SvImJ_T0102691.1 MGP_129S1SvImJ_G0040524.1 mouse_genomes_project 7 9787326 9788017 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0101321.1 MGP_129S1SvImJ_G0039388.1 mouse_genomes_project 7 60418660 60418739 - snoRNA snoRNA MGP_129S1SvImJ_T0084998.1 MGP_129S1SvImJ_G0032518.1 mouse_genomes_project 7 99642383 99757423 + MGP_129S1SvImJ_P0084998 Nars2 protein_coding protein_coding MGP_129S1SvImJ_T0084999.1 MGP_129S1SvImJ_G0032518.1 mouse_genomes_project 7 99642399 99695487 + Nars2 protein_coding processed_transcript MGP_129S1SvImJ_T0085000.1 MGP_129S1SvImJ_G0032518.1 mouse_genomes_project 7 99642440 99732574 + MGP_129S1SvImJ_P0085000 Nars2 protein_coding protein_coding MGP_129S1SvImJ_T0085001.1 MGP_129S1SvImJ_G0032518.1 mouse_genomes_project 7 99716034 99755607 + MGP_129S1SvImJ_P0085001 Nars2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0085002.1 MGP_129S1SvImJ_G0032518.1 mouse_genomes_project 7 99731936 99755637 + MGP_129S1SvImJ_P0085002 Nars2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0082119.1 MGP_129S1SvImJ_G0031817.1 mouse_genomes_project 7 22447988 22454088 + MGP_129S1SvImJ_P0082119 Zfp114 protein_coding protein_coding MGP_129S1SvImJ_T0082120.1 MGP_129S1SvImJ_G0031817.1 mouse_genomes_project 7 22448014 22455339 + MGP_129S1SvImJ_P0082120 Zfp114 protein_coding protein_coding MGP_129S1SvImJ_T0082121.1 MGP_129S1SvImJ_G0031817.1 mouse_genomes_project 7 22450292 22456207 + MGP_129S1SvImJ_P0082121 Zfp114 protein_coding protein_coding MGP_129S1SvImJ_T0083719.1 MGP_129S1SvImJ_G0032199.1 mouse_genomes_project 7 45324705 45336827 - MGP_129S1SvImJ_P0083719 Fcgrt protein_coding protein_coding MGP_129S1SvImJ_T0086392.1 MGP_129S1SvImJ_G0032971.1 mouse_genomes_project 7 129927294 129938782 + D430042O09Rik protein_coding retained_intron MGP_129S1SvImJ_T0086393.1 MGP_129S1SvImJ_G0032971.1 mouse_genomes_project 7 129927319 130100749 + MGP_129S1SvImJ_P0086393 D430042O09Rik protein_coding protein_coding MGP_129S1SvImJ_T0086394.1 MGP_129S1SvImJ_G0032971.1 mouse_genomes_project 7 129927368 129983018 + MGP_129S1SvImJ_P0086394 D430042O09Rik protein_coding protein_coding MGP_129S1SvImJ_T0086395.1 MGP_129S1SvImJ_G0032971.1 mouse_genomes_project 7 130009486 130086651 + D430042O09Rik protein_coding processed_transcript MGP_129S1SvImJ_T0086396.1 MGP_129S1SvImJ_G0032971.1 mouse_genomes_project 7 130054176 130100742 + D430042O09Rik protein_coding retained_intron MGP_129S1SvImJ_T0086397.1 MGP_129S1SvImJ_G0032971.1 mouse_genomes_project 7 130085332 130098195 + MGP_129S1SvImJ_P0086397 D430042O09Rik protein_coding protein_coding MGP_129S1SvImJ_T0086398.1 MGP_129S1SvImJ_G0032971.1 mouse_genomes_project 7 130089921 130093926 + D430042O09Rik protein_coding retained_intron MGP_129S1SvImJ_T0081957.1 MGP_129S1SvImJ_G0031765.1 mouse_genomes_project 7 17179468 17191085 + MGP_129S1SvImJ_P0081957 Gpr4 protein_coding protein_coding MGP_129S1SvImJ_T0086269.1 MGP_129S1SvImJ_G0032948.1 mouse_genomes_project 7 126098234 126130961 - Ears2 protein_coding retained_intron MGP_129S1SvImJ_T0086270.1 MGP_129S1SvImJ_G0032948.1 mouse_genomes_project 7 126099838 126131020 - Ears2 protein_coding retained_intron MGP_129S1SvImJ_T0086271.1 MGP_129S1SvImJ_G0032948.1 mouse_genomes_project 7 126099838 126131213 - MGP_129S1SvImJ_P0086271 Ears2 protein_coding protein_coding MGP_129S1SvImJ_T0083919.1 MGP_129S1SvImJ_G0032251.1 mouse_genomes_project 7 46153786 46190366 - MGP_129S1SvImJ_P0083919 Grin2d protein_coding protein_coding MGP_129S1SvImJ_T0083920.1 MGP_129S1SvImJ_G0032251.1 mouse_genomes_project 7 46189612 46195569 - MGP_129S1SvImJ_P0083920 Grin2d protein_coding protein_coding MGP_129S1SvImJ_T0086871.1 MGP_129S1SvImJ_G0033054.1 mouse_genomes_project 7 132158530 132178345 + MGP_129S1SvImJ_P0086871 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086872.1 MGP_129S1SvImJ_G0033054.1 mouse_genomes_project 7 132172318 132176565 + MGP_129S1SvImJ_P0086872 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0005279.1 MGP_129S1SvImJ_G0004486.1 mouse_genomes_project 7 100358148 100404358 - Rsf1os2 antisense antisense MGP_129S1SvImJ_T0005280.1 MGP_129S1SvImJ_G0004486.1 mouse_genomes_project 7 100401240 100404436 - Rsf1os2 antisense antisense MGP_129S1SvImJ_T0005281.1 MGP_129S1SvImJ_G0004486.1 mouse_genomes_project 7 100403697 100404643 - Rsf1os2 antisense antisense MGP_129S1SvImJ_T0084835.1 MGP_129S1SvImJ_G0032453.1 mouse_genomes_project 7 85942911 85961262 - MGP_129S1SvImJ_P0084835 Cfap161 protein_coding protein_coding MGP_129S1SvImJ_T0084836.1 MGP_129S1SvImJ_G0032453.1 mouse_genomes_project 7 85944431 85961323 - MGP_129S1SvImJ_P0084836 Cfap161 protein_coding protein_coding MGP_129S1SvImJ_T0084837.1 MGP_129S1SvImJ_G0032453.1 mouse_genomes_project 7 85950808 85960614 - MGP_129S1SvImJ_P0084837 Cfap161 protein_coding protein_coding MGP_129S1SvImJ_T0081868.1 MGP_129S1SvImJ_G0031736.1 mouse_genomes_project 7 15886038 15891924 + MGP_129S1SvImJ_P0081868 Ceacam12 protein_coding protein_coding MGP_129S1SvImJ_T0081869.1 MGP_129S1SvImJ_G0031736.1 mouse_genomes_project 7 15886048 15898130 + MGP_129S1SvImJ_P0081869 Ceacam12 protein_coding protein_coding MGP_129S1SvImJ_T0081870.1 MGP_129S1SvImJ_G0031736.1 mouse_genomes_project 7 15886100 15890538 + MGP_129S1SvImJ_P0081870 Ceacam12 protein_coding protein_coding MGP_129S1SvImJ_T0081901.1 MGP_129S1SvImJ_G0031752.1 mouse_genomes_project 7 16944326 16947062 + MGP_129S1SvImJ_P0081901 Irf2bp1 protein_coding protein_coding MGP_129S1SvImJ_T0005328.1 MGP_129S1SvImJ_G0004520.1 mouse_genomes_project 7 145972065 145980540 - C330022C24Rik antisense antisense MGP_129S1SvImJ_T0085787.1 MGP_129S1SvImJ_G0032830.1 mouse_genomes_project 7 112205783 112206716 - MGP_129S1SvImJ_P0085787 Olfr514 protein_coding protein_coding MGP_129S1SvImJ_T0005299.1 MGP_129S1SvImJ_G0004498.1 mouse_genomes_project 7 125345047 125432972 - Gm45077 antisense antisense MGP_129S1SvImJ_T0082371.1 MGP_129S1SvImJ_G0031877.1 mouse_genomes_project 7 24218912 24226899 - MGP_129S1SvImJ_P0082371 Ccdc97 protein_coding protein_coding MGP_129S1SvImJ_T0082372.1 MGP_129S1SvImJ_G0031877.1 mouse_genomes_project 7 24220741 24223913 - Ccdc97 protein_coding processed_transcript MGP_129S1SvImJ_T0082373.1 MGP_129S1SvImJ_G0031877.1 mouse_genomes_project 7 24221940 24226814 - Ccdc97 protein_coding retained_intron MGP_129S1SvImJ_T0082374.1 MGP_129S1SvImJ_G0031877.1 mouse_genomes_project 7 24222628 24226856 - MGP_129S1SvImJ_P0082374 Ccdc97 protein_coding protein_coding MGP_129S1SvImJ_T0082375.1 MGP_129S1SvImJ_G0031877.1 mouse_genomes_project 7 24222716 24224201 - Ccdc97 protein_coding retained_intron MGP_129S1SvImJ_T0082376.1 MGP_129S1SvImJ_G0031877.1 mouse_genomes_project 7 24223710 24226817 - Ccdc97 protein_coding processed_transcript MGP_129S1SvImJ_T0082377.1 MGP_129S1SvImJ_G0031877.1 mouse_genomes_project 7 24223710 24226802 - Ccdc97 protein_coding processed_transcript MGP_129S1SvImJ_T0082378.1 MGP_129S1SvImJ_G0031877.1 mouse_genomes_project 7 24223947 24226866 - Ccdc97 protein_coding processed_transcript MGP_129S1SvImJ_T0082379.1 MGP_129S1SvImJ_G0031877.1 mouse_genomes_project 7 24224712 24226878 - Ccdc97 protein_coding processed_transcript MGP_129S1SvImJ_T0015827.1 MGP_129S1SvImJ_G0013916.1 mouse_genomes_project 7 59671271 59672417 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0083440.1 MGP_129S1SvImJ_G0032121.1 mouse_genomes_project 7 43441610 43449932 + MGP_129S1SvImJ_P0083440 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0008887.1 MGP_129S1SvImJ_G0007179.1 mouse_genomes_project 7 65128005 65156482 + Gm45055 lincRNA lincRNA MGP_129S1SvImJ_T0008888.1 MGP_129S1SvImJ_G0007179.1 mouse_genomes_project 7 65137388 65156452 + Gm45055 lincRNA lincRNA MGP_129S1SvImJ_T0081182.1 MGP_129S1SvImJ_G0031518.1 mouse_genomes_project 7 308774 335251 + MGP_129S1SvImJ_P0081182 Cacng8 protein_coding protein_coding MGP_129S1SvImJ_T0081183.1 MGP_129S1SvImJ_G0031518.1 mouse_genomes_project 7 309240 313050 + MGP_129S1SvImJ_P0081183 Cacng8 protein_coding protein_coding MGP_129S1SvImJ_T0081184.1 MGP_129S1SvImJ_G0031518.1 mouse_genomes_project 7 312214 335251 + MGP_129S1SvImJ_P0081184 Cacng8 protein_coding protein_coding MGP_129S1SvImJ_T0082563.1 MGP_129S1SvImJ_G0031925.1 mouse_genomes_project 7 26671755 26699580 - MGP_129S1SvImJ_P0082563 protein_coding protein_coding MGP_129S1SvImJ_T0081789.1 MGP_129S1SvImJ_G0031715.1 mouse_genomes_project 7 14476679 14490078 + MGP_129S1SvImJ_P0081789 Ap2s1 protein_coding protein_coding MGP_129S1SvImJ_T0081790.1 MGP_129S1SvImJ_G0031715.1 mouse_genomes_project 7 14476713 14489798 + MGP_129S1SvImJ_P0081790 Ap2s1 protein_coding protein_coding MGP_129S1SvImJ_T0081791.1 MGP_129S1SvImJ_G0031715.1 mouse_genomes_project 7 14476741 14489718 + MGP_129S1SvImJ_P0081791 Ap2s1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0081792.1 MGP_129S1SvImJ_G0031715.1 mouse_genomes_project 7 14476807 14489532 + Ap2s1 protein_coding processed_transcript MGP_129S1SvImJ_T0081793.1 MGP_129S1SvImJ_G0031715.1 mouse_genomes_project 7 14487546 14490078 + Ap2s1 protein_coding retained_intron MGP_129S1SvImJ_T0098720.1 MGP_129S1SvImJ_G0036805.1 mouse_genomes_project 7 3828155 3828249 + Gm27675 sRNA sRNA MGP_129S1SvImJ_T0102816.1 MGP_129S1SvImJ_G0040648.1 mouse_genomes_project 7 107813530 107813902 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0005289.1 MGP_129S1SvImJ_G0004491.1 mouse_genomes_project 7 114412842 114413709 + Gm16336 antisense antisense MGP_129S1SvImJ_T0082417.1 MGP_129S1SvImJ_G0031888.1 mouse_genomes_project 7 25180263 25197560 - MGP_129S1SvImJ_P0082417 protein_coding protein_coding MGP_129S1SvImJ_T0082084.1 MGP_129S1SvImJ_G0031799.1 mouse_genomes_project 7 17911244 17920379 - MGP_129S1SvImJ_P0082084 Ceacam16 protein_coding protein_coding MGP_129S1SvImJ_T0085602.1 MGP_129S1SvImJ_G0032740.1 mouse_genomes_project 7 108347634 108348582 + MGP_129S1SvImJ_P0085602 protein_coding protein_coding MGP_129S1SvImJ_T0085491.1 MGP_129S1SvImJ_G0032660.1 mouse_genomes_project 7 106603223 106604138 - MGP_129S1SvImJ_P0085491 protein_coding protein_coding MGP_129S1SvImJ_T0083703.1 MGP_129S1SvImJ_G0032191.1 mouse_genomes_project 7 45215538 45222029 - MGP_129S1SvImJ_P0083703 Bcl2l12 protein_coding protein_coding MGP_129S1SvImJ_T0018368.1 MGP_129S1SvImJ_G0015657.1 mouse_genomes_project 7 25879975 25891049 + Gm44641 processed_transcript processed_transcript MGP_129S1SvImJ_T0087187.1 MGP_129S1SvImJ_G0033119.1 mouse_genomes_project 7 137699883 137728951 - MGP_129S1SvImJ_P0087187 Ctbp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087188.1 MGP_129S1SvImJ_G0033119.1 mouse_genomes_project 7 137699883 137728709 - MGP_129S1SvImJ_P0087188 Ctbp2 protein_coding protein_coding MGP_129S1SvImJ_T0087189.1 MGP_129S1SvImJ_G0033119.1 mouse_genomes_project 7 137699949 137743534 - MGP_129S1SvImJ_P0087189 Ctbp2 protein_coding protein_coding MGP_129S1SvImJ_T0087190.1 MGP_129S1SvImJ_G0033119.1 mouse_genomes_project 7 137703867 137741535 - MGP_129S1SvImJ_P0087190 Ctbp2 protein_coding protein_coding MGP_129S1SvImJ_T0087191.1 MGP_129S1SvImJ_G0033119.1 mouse_genomes_project 7 137707336 137847672 - MGP_129S1SvImJ_P0087191 Ctbp2 protein_coding protein_coding MGP_129S1SvImJ_T0087192.1 MGP_129S1SvImJ_G0033119.1 mouse_genomes_project 7 137727927 137848922 - Ctbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0087193.1 MGP_129S1SvImJ_G0033119.1 mouse_genomes_project 7 137727927 137848819 - Ctbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0087194.1 MGP_129S1SvImJ_G0033119.1 mouse_genomes_project 7 137728117 137848817 - MGP_129S1SvImJ_P0087194 Ctbp2 protein_coding protein_coding MGP_129S1SvImJ_T0087195.1 MGP_129S1SvImJ_G0033119.1 mouse_genomes_project 7 137728191 137838163 - Ctbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0087196.1 MGP_129S1SvImJ_G0033119.1 mouse_genomes_project 7 137728296 137747892 - Ctbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0087197.1 MGP_129S1SvImJ_G0033119.1 mouse_genomes_project 7 137728314 137849121 - Ctbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0087198.1 MGP_129S1SvImJ_G0033119.1 mouse_genomes_project 7 137728582 137848087 - MGP_129S1SvImJ_P0087198 Ctbp2 protein_coding protein_coding MGP_129S1SvImJ_T0087199.1 MGP_129S1SvImJ_G0033119.1 mouse_genomes_project 7 137728624 137848896 - MGP_129S1SvImJ_P0087199 Ctbp2 protein_coding protein_coding MGP_129S1SvImJ_T0087200.1 MGP_129S1SvImJ_G0033119.1 mouse_genomes_project 7 137743465 137849705 - MGP_129S1SvImJ_P0087200 Ctbp2 protein_coding protein_coding MGP_129S1SvImJ_T0087201.1 MGP_129S1SvImJ_G0033119.1 mouse_genomes_project 7 137743483 137837255 - MGP_129S1SvImJ_P0087201 Ctbp2 protein_coding protein_coding MGP_129S1SvImJ_T0087202.1 MGP_129S1SvImJ_G0033119.1 mouse_genomes_project 7 137743484 137848783 - MGP_129S1SvImJ_P0087202 Ctbp2 protein_coding protein_coding MGP_129S1SvImJ_T0087203.1 MGP_129S1SvImJ_G0033119.1 mouse_genomes_project 7 137743527 137849207 - MGP_129S1SvImJ_P0087203 Ctbp2 protein_coding protein_coding MGP_129S1SvImJ_T0087204.1 MGP_129S1SvImJ_G0033119.1 mouse_genomes_project 7 137763428 137849207 - Ctbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0087205.1 MGP_129S1SvImJ_G0033119.1 mouse_genomes_project 7 137802746 137848655 - Ctbp2 protein_coding retained_intron MGP_129S1SvImJ_T0002248.1 MGP_129S1SvImJ_G0002160.1 mouse_genomes_project 7 44553185 44555940 + TEC TEC MGP_129S1SvImJ_T0102763.1 MGP_129S1SvImJ_G0040595.1 mouse_genomes_project 7 48897257 48898242 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0082694.1 MGP_129S1SvImJ_G0031963.1 mouse_genomes_project 7 27669840 27676160 + Ech1 protein_coding retained_intron MGP_129S1SvImJ_T0082695.1 MGP_129S1SvImJ_G0031963.1 mouse_genomes_project 7 27669840 27678265 + MGP_129S1SvImJ_P0082695 Ech1 protein_coding protein_coding MGP_129S1SvImJ_T0082696.1 MGP_129S1SvImJ_G0031963.1 mouse_genomes_project 7 27669972 27671279 + Ech1 protein_coding retained_intron MGP_129S1SvImJ_T0082697.1 MGP_129S1SvImJ_G0031963.1 mouse_genomes_project 7 27670581 27677251 + Ech1 protein_coding processed_transcript MGP_129S1SvImJ_T0082698.1 MGP_129S1SvImJ_G0031963.1 mouse_genomes_project 7 27670827 27678265 + MGP_129S1SvImJ_P0082698 Ech1 protein_coding protein_coding MGP_129S1SvImJ_T0082699.1 MGP_129S1SvImJ_G0031963.1 mouse_genomes_project 7 27676168 27678265 + Ech1 protein_coding retained_intron MGP_129S1SvImJ_T0082700.1 MGP_129S1SvImJ_G0031963.1 mouse_genomes_project 7 27677268 27678265 + Ech1 protein_coding retained_intron MGP_129S1SvImJ_T0015903.1 MGP_129S1SvImJ_G0013992.1 mouse_genomes_project 7 118375789 118376914 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0086525.1 MGP_129S1SvImJ_G0032991.1 mouse_genomes_project 7 130956432 130961618 - MGP_129S1SvImJ_P0086525 Sult1a1 protein_coding protein_coding MGP_129S1SvImJ_T0086526.1 MGP_129S1SvImJ_G0032991.1 mouse_genomes_project 7 130956437 130961543 - MGP_129S1SvImJ_P0086526 Sult1a1 protein_coding protein_coding MGP_129S1SvImJ_T0086527.1 MGP_129S1SvImJ_G0032991.1 mouse_genomes_project 7 130956438 130961543 - MGP_129S1SvImJ_P0086527 Sult1a1 protein_coding protein_coding MGP_129S1SvImJ_T0086528.1 MGP_129S1SvImJ_G0032991.1 mouse_genomes_project 7 130957835 130961561 - MGP_129S1SvImJ_P0086528 Sult1a1 protein_coding protein_coding MGP_129S1SvImJ_T0084521.1 MGP_129S1SvImJ_G0032389.1 mouse_genomes_project 7 81331174 81351061 - MGP_129S1SvImJ_P0084521 Polg protein_coding protein_coding MGP_129S1SvImJ_T0084522.1 MGP_129S1SvImJ_G0032389.1 mouse_genomes_project 7 81334325 81336582 - MGP_129S1SvImJ_P0084522 Polg protein_coding protein_coding MGP_129S1SvImJ_T0084523.1 MGP_129S1SvImJ_G0032389.1 mouse_genomes_project 7 81334326 81340026 - Polg protein_coding retained_intron MGP_129S1SvImJ_T0084524.1 MGP_129S1SvImJ_G0032389.1 mouse_genomes_project 7 81334326 81350886 - Polg protein_coding retained_intron MGP_129S1SvImJ_T0084525.1 MGP_129S1SvImJ_G0032389.1 mouse_genomes_project 7 81334326 81335562 - MGP_129S1SvImJ_P0084525 Polg protein_coding protein_coding MGP_129S1SvImJ_T0084526.1 MGP_129S1SvImJ_G0032389.1 mouse_genomes_project 7 81334507 81350879 - MGP_129S1SvImJ_P0084526 Polg protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084527.1 MGP_129S1SvImJ_G0032389.1 mouse_genomes_project 7 81334521 81350897 - MGP_129S1SvImJ_P0084527 Polg protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0084528.1 MGP_129S1SvImJ_G0032389.1 mouse_genomes_project 7 81335110 81337028 - Polg protein_coding retained_intron MGP_129S1SvImJ_T0084529.1 MGP_129S1SvImJ_G0032389.1 mouse_genomes_project 7 81336534 81336870 - MGP_129S1SvImJ_P0084529 Polg protein_coding protein_coding MGP_129S1SvImJ_T0084530.1 MGP_129S1SvImJ_G0032389.1 mouse_genomes_project 7 81336547 81338732 - MGP_129S1SvImJ_P0084530 Polg protein_coding protein_coding MGP_129S1SvImJ_T0084531.1 MGP_129S1SvImJ_G0032389.1 mouse_genomes_project 7 81336877 81339286 - Polg protein_coding retained_intron MGP_129S1SvImJ_T0084532.1 MGP_129S1SvImJ_G0032389.1 mouse_genomes_project 7 81338891 81341011 - Polg protein_coding retained_intron MGP_129S1SvImJ_T0084533.1 MGP_129S1SvImJ_G0032389.1 mouse_genomes_project 7 81339476 81340340 - Polg protein_coding retained_intron MGP_129S1SvImJ_T0084534.1 MGP_129S1SvImJ_G0032389.1 mouse_genomes_project 7 81340431 81344396 - MGP_129S1SvImJ_P0084534 Polg protein_coding protein_coding MGP_129S1SvImJ_T0084535.1 MGP_129S1SvImJ_G0032389.1 mouse_genomes_project 7 81341015 81344751 - MGP_129S1SvImJ_P0084535 Polg protein_coding protein_coding MGP_129S1SvImJ_T0084536.1 MGP_129S1SvImJ_G0032389.1 mouse_genomes_project 7 81344476 81346742 - Polg protein_coding processed_transcript MGP_129S1SvImJ_T0084537.1 MGP_129S1SvImJ_G0032389.1 mouse_genomes_project 7 81348614 81350893 - Polg protein_coding retained_intron MGP_129S1SvImJ_T0084538.1 MGP_129S1SvImJ_G0032389.1 mouse_genomes_project 7 81349593 81350769 - MGP_129S1SvImJ_P0084538 Polg protein_coding protein_coding MGP_129S1SvImJ_T0083850.1 MGP_129S1SvImJ_G0032231.1 mouse_genomes_project 7 45864751 45884149 + MGP_129S1SvImJ_P0083850 Bcat2 protein_coding protein_coding MGP_129S1SvImJ_T0083851.1 MGP_129S1SvImJ_G0032231.1 mouse_genomes_project 7 45864948 45881332 + Bcat2 protein_coding retained_intron MGP_129S1SvImJ_T0083852.1 MGP_129S1SvImJ_G0032231.1 mouse_genomes_project 7 45864971 45884149 + MGP_129S1SvImJ_P0083852 Bcat2 protein_coding protein_coding MGP_129S1SvImJ_T0083853.1 MGP_129S1SvImJ_G0032231.1 mouse_genomes_project 7 45865594 45884149 + MGP_129S1SvImJ_P0083853 Bcat2 protein_coding protein_coding MGP_129S1SvImJ_T0083854.1 MGP_129S1SvImJ_G0032231.1 mouse_genomes_project 7 45867480 45884149 + MGP_129S1SvImJ_P0083854 Bcat2 protein_coding protein_coding MGP_129S1SvImJ_T0083855.1 MGP_129S1SvImJ_G0032231.1 mouse_genomes_project 7 45869740 45879591 + MGP_129S1SvImJ_P0083855 Bcat2 protein_coding protein_coding MGP_129S1SvImJ_T0083856.1 MGP_129S1SvImJ_G0032231.1 mouse_genomes_project 7 45869862 45879710 + Bcat2 protein_coding retained_intron MGP_129S1SvImJ_T0015697.1 MGP_129S1SvImJ_G0013786.1 mouse_genomes_project 7 918316 918715 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0086298.1 MGP_129S1SvImJ_G0032953.1 mouse_genomes_project 7 126234992 126246281 + MGP_129S1SvImJ_P0086298 Plk1 protein_coding protein_coding MGP_129S1SvImJ_T0086299.1 MGP_129S1SvImJ_G0032953.1 mouse_genomes_project 7 126235060 126239525 + MGP_129S1SvImJ_P0086299 Plk1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0086300.1 MGP_129S1SvImJ_G0032953.1 mouse_genomes_project 7 126235134 126237180 + MGP_129S1SvImJ_P0086300 Plk1 protein_coding protein_coding MGP_129S1SvImJ_T0098383.1 MGP_129S1SvImJ_G0036468.1 mouse_genomes_project 7 107837122 107838081 + pseudogene pseudogene MGP_129S1SvImJ_T0082749.1 MGP_129S1SvImJ_G0031974.1 mouse_genomes_project 7 28077607 28081327 + MGP_129S1SvImJ_P0082749 Ggn protein_coding protein_coding MGP_129S1SvImJ_T0082750.1 MGP_129S1SvImJ_G0031974.1 mouse_genomes_project 7 28077777 28081306 + MGP_129S1SvImJ_P0082750 Ggn protein_coding protein_coding MGP_129S1SvImJ_T0025090.1 MGP_129S1SvImJ_G0017185.1 mouse_genomes_project 10 41217095 41252204 + MGP_129S1SvImJ_P0025090 Snx3 protein_coding protein_coding MGP_129S1SvImJ_T0025091.1 MGP_129S1SvImJ_G0017185.1 mouse_genomes_project 10 41217096 41252787 + MGP_129S1SvImJ_P0025091 Snx3 protein_coding protein_coding MGP_129S1SvImJ_T0025092.1 MGP_129S1SvImJ_G0017185.1 mouse_genomes_project 10 41217355 41252798 + MGP_129S1SvImJ_P0025092 Snx3 protein_coding protein_coding MGP_129S1SvImJ_T0026305.1 MGP_129S1SvImJ_G0017508.1 mouse_genomes_project 10 81214481 81221168 - MGP_129S1SvImJ_P0026305 Abhd17a protein_coding protein_coding MGP_129S1SvImJ_T0026306.1 MGP_129S1SvImJ_G0017508.1 mouse_genomes_project 10 81214482 81221151 - MGP_129S1SvImJ_P0026306 Abhd17a protein_coding protein_coding MGP_129S1SvImJ_T0026307.1 MGP_129S1SvImJ_G0017508.1 mouse_genomes_project 10 81214483 81217452 - MGP_129S1SvImJ_P0026307 Abhd17a protein_coding protein_coding MGP_129S1SvImJ_T0026308.1 MGP_129S1SvImJ_G0017508.1 mouse_genomes_project 10 81217506 81221142 - MGP_129S1SvImJ_P0026308 Abhd17a protein_coding protein_coding MGP_129S1SvImJ_T0027093.1 MGP_129S1SvImJ_G0017728.1 mouse_genomes_project 10 114801640 114994205 + MGP_129S1SvImJ_P0027093 Kcnc2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0026654.1 MGP_129S1SvImJ_G0017601.1 mouse_genomes_project 10 86299438 86577312 + MGP_129S1SvImJ_P0026654 Btbd11 protein_coding protein_coding MGP_129S1SvImJ_T0026655.1 MGP_129S1SvImJ_G0017601.1 mouse_genomes_project 10 86299451 86557433 + MGP_129S1SvImJ_P0026655 Btbd11 protein_coding protein_coding MGP_129S1SvImJ_T0026656.1 MGP_129S1SvImJ_G0017601.1 mouse_genomes_project 10 86514074 86577312 + MGP_129S1SvImJ_P0026656 Btbd11 protein_coding protein_coding MGP_129S1SvImJ_T0026657.1 MGP_129S1SvImJ_G0017601.1 mouse_genomes_project 10 86514084 86521755 + Btbd11 protein_coding processed_transcript MGP_129S1SvImJ_T0026658.1 MGP_129S1SvImJ_G0017601.1 mouse_genomes_project 10 86546189 86558475 + Btbd11 protein_coding retained_intron MGP_129S1SvImJ_T0026659.1 MGP_129S1SvImJ_G0017601.1 mouse_genomes_project 10 86556411 86577309 + Btbd11 protein_coding processed_transcript MGP_129S1SvImJ_T0026660.1 MGP_129S1SvImJ_G0017601.1 mouse_genomes_project 10 86562093 86577312 + Btbd11 protein_coding retained_intron MGP_129S1SvImJ_T0026661.1 MGP_129S1SvImJ_G0017601.1 mouse_genomes_project 10 86571148 86575280 + Btbd11 protein_coding retained_intron MGP_129S1SvImJ_T0024928.1 MGP_129S1SvImJ_G0017134.1 mouse_genomes_project 10 32371136 32376666 - MGP_129S1SvImJ_P0024928 Fam26d protein_coding protein_coding MGP_129S1SvImJ_T0026324.1 MGP_129S1SvImJ_G0017514.1 mouse_genomes_project 10 81325322 81341872 - MGP_129S1SvImJ_P0026324 Mob3a protein_coding protein_coding MGP_129S1SvImJ_T0027596.1 MGP_129S1SvImJ_G0017916.1 mouse_genomes_project 10 133449831 133453789 + MGP_129S1SvImJ_P0027596 Olfr794 protein_coding protein_coding MGP_129S1SvImJ_T0027597.1 MGP_129S1SvImJ_G0017916.1 mouse_genomes_project 10 133452826 133453789 + MGP_129S1SvImJ_P0027597 Olfr794 protein_coding protein_coding MGP_129S1SvImJ_T0024396.1 MGP_129S1SvImJ_G0016974.1 mouse_genomes_project 10 670502 888144 + Plekhg1 protein_coding retained_intron MGP_129S1SvImJ_T0024397.1 MGP_129S1SvImJ_G0016974.1 mouse_genomes_project 10 675019 888104 + Plekhg1 protein_coding retained_intron MGP_129S1SvImJ_T0024398.1 MGP_129S1SvImJ_G0016974.1 mouse_genomes_project 10 806621 918708 + MGP_129S1SvImJ_P0024398 Plekhg1 protein_coding protein_coding MGP_129S1SvImJ_T0024399.1 MGP_129S1SvImJ_G0016974.1 mouse_genomes_project 10 813816 915953 + MGP_129S1SvImJ_P0024399 Plekhg1 protein_coding protein_coding MGP_129S1SvImJ_T0024400.1 MGP_129S1SvImJ_G0016974.1 mouse_genomes_project 10 852102 865547 + Plekhg1 protein_coding retained_intron MGP_129S1SvImJ_T0024401.1 MGP_129S1SvImJ_G0016974.1 mouse_genomes_project 10 852106 918702 + MGP_129S1SvImJ_P0024401 Plekhg1 protein_coding protein_coding MGP_129S1SvImJ_T0024402.1 MGP_129S1SvImJ_G0016974.1 mouse_genomes_project 10 907404 914930 + MGP_129S1SvImJ_P0024402 Plekhg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027348.1 MGP_129S1SvImJ_G0017817.1 mouse_genomes_project 10 130886586 130902092 - MGP_129S1SvImJ_P0027348 Mars protein_coding protein_coding MGP_129S1SvImJ_T0027349.1 MGP_129S1SvImJ_G0017817.1 mouse_genomes_project 10 130886587 130902092 - MGP_129S1SvImJ_P0027349 Mars protein_coding protein_coding MGP_129S1SvImJ_T0027350.1 MGP_129S1SvImJ_G0017817.1 mouse_genomes_project 10 130886591 130901984 - Mars protein_coding retained_intron MGP_129S1SvImJ_T0027351.1 MGP_129S1SvImJ_G0017817.1 mouse_genomes_project 10 130886591 130888164 - MGP_129S1SvImJ_P0027351 Mars protein_coding protein_coding MGP_129S1SvImJ_T0027352.1 MGP_129S1SvImJ_G0017817.1 mouse_genomes_project 10 130886714 130888075 - Mars protein_coding retained_intron MGP_129S1SvImJ_T0027353.1 MGP_129S1SvImJ_G0017817.1 mouse_genomes_project 10 130898341 130899279 - Mars protein_coding retained_intron MGP_129S1SvImJ_T0100437.1 MGP_129S1SvImJ_G0038504.1 mouse_genomes_project 10 62225895 62226804 - Snord98 snoRNA snoRNA MGP_129S1SvImJ_T0026175.1 MGP_129S1SvImJ_G0017483.1 mouse_genomes_project 10 80715639 80722576 - MGP_129S1SvImJ_P0026175 Cbarp protein_coding protein_coding MGP_129S1SvImJ_T0026176.1 MGP_129S1SvImJ_G0017483.1 mouse_genomes_project 10 80715639 80722576 - MGP_129S1SvImJ_P0026176 Cbarp protein_coding protein_coding MGP_129S1SvImJ_T0026177.1 MGP_129S1SvImJ_G0017483.1 mouse_genomes_project 10 80715739 80724461 - MGP_129S1SvImJ_P0026177 Cbarp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026178.1 MGP_129S1SvImJ_G0017483.1 mouse_genomes_project 10 80715739 80724461 - MGP_129S1SvImJ_P0026178 Cbarp protein_coding protein_coding MGP_129S1SvImJ_T0026179.1 MGP_129S1SvImJ_G0017483.1 mouse_genomes_project 10 80717600 80724397 - MGP_129S1SvImJ_P0026179 Cbarp protein_coding unknown_likely_coding MGP_129S1SvImJ_T0026180.1 MGP_129S1SvImJ_G0017483.1 mouse_genomes_project 10 80717724 80719870 - Cbarp protein_coding retained_intron MGP_129S1SvImJ_T0026181.1 MGP_129S1SvImJ_G0017483.1 mouse_genomes_project 10 80718262 80720777 - Cbarp protein_coding retained_intron MGP_129S1SvImJ_T0026182.1 MGP_129S1SvImJ_G0017483.1 mouse_genomes_project 10 80720306 80724459 - MGP_129S1SvImJ_P0026182 Cbarp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026183.1 MGP_129S1SvImJ_G0017483.1 mouse_genomes_project 10 80720346 80724274 - MGP_129S1SvImJ_P0026183 Cbarp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026184.1 MGP_129S1SvImJ_G0017483.1 mouse_genomes_project 10 80720704 80723018 - Cbarp protein_coding processed_transcript MGP_129S1SvImJ_T0026185.1 MGP_129S1SvImJ_G0017483.1 mouse_genomes_project 10 80721833 80723005 - Cbarp protein_coding processed_transcript MGP_129S1SvImJ_T0026186.1 MGP_129S1SvImJ_G0017483.1 mouse_genomes_project 10 80721851 80722541 - Cbarp protein_coding processed_transcript MGP_129S1SvImJ_T0026187.1 MGP_129S1SvImJ_G0017483.1 mouse_genomes_project 10 80721896 80722791 - Cbarp protein_coding retained_intron MGP_129S1SvImJ_T0026188.1 MGP_129S1SvImJ_G0017483.1 mouse_genomes_project 10 80722062 80722783 - Cbarp protein_coding retained_intron MGP_129S1SvImJ_T0026189.1 MGP_129S1SvImJ_G0017483.1 mouse_genomes_project 10 80722535 80723712 - Cbarp protein_coding processed_transcript MGP_129S1SvImJ_T0026190.1 MGP_129S1SvImJ_G0017483.1 mouse_genomes_project 10 80722535 80725977 - MGP_129S1SvImJ_P0026190 Cbarp protein_coding protein_coding MGP_129S1SvImJ_T0012459.1 MGP_129S1SvImJ_G0010548.1 mouse_genomes_project 10 121931202 121932110 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0027354.1 MGP_129S1SvImJ_G0017818.1 mouse_genomes_project 10 130916131 130921761 + MGP_129S1SvImJ_P0027354 Arhgap9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0025023.1 MGP_129S1SvImJ_G0017170.1 mouse_genomes_project 10 39830168 39951433 - MGP_129S1SvImJ_P0025023 Fig4 protein_coding protein_coding MGP_129S1SvImJ_T0025389.1 MGP_129S1SvImJ_G0017286.1 mouse_genomes_project 10 61056938 61065693 + MGP_129S1SvImJ_P0025389 Tysnd1 protein_coding protein_coding MGP_129S1SvImJ_T0025519.1 MGP_129S1SvImJ_G0017317.1 mouse_genomes_project 10 62953024 62953601 - MGP_129S1SvImJ_P0025519 Gm7075 protein_coding protein_coding MGP_129S1SvImJ_T0026649.1 MGP_129S1SvImJ_G0017596.1 mouse_genomes_project 10 85998814 86004291 - MGP_129S1SvImJ_P0026649 Fhl4 protein_coding protein_coding MGP_129S1SvImJ_T0098442.1 MGP_129S1SvImJ_G0036527.1 mouse_genomes_project 10 107919029 107919140 - n-R5s80 rRNA rRNA MGP_129S1SvImJ_T0012429.1 MGP_129S1SvImJ_G0010518.1 mouse_genomes_project 10 51541770 51542205 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009603.1 MGP_129S1SvImJ_G0007719.1 mouse_genomes_project 10 76217322 76217414 + Mir6409 miRNA miRNA MGP_129S1SvImJ_T0009614.1 MGP_129S1SvImJ_G0007730.1 mouse_genomes_project 10 80985119 80985202 + Gm22721 miRNA miRNA MGP_129S1SvImJ_T0012450.1 MGP_129S1SvImJ_G0010539.1 mouse_genomes_project 10 95090743 95091206 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0026638.1 MGP_129S1SvImJ_G0017592.1 mouse_genomes_project 10 85449440 85487198 + MGP_129S1SvImJ_P0026638 Tcp11l2 protein_coding protein_coding MGP_129S1SvImJ_T0026639.1 MGP_129S1SvImJ_G0017592.1 mouse_genomes_project 10 85449711 85468079 + Tcp11l2 protein_coding retained_intron MGP_129S1SvImJ_T0026640.1 MGP_129S1SvImJ_G0017592.1 mouse_genomes_project 10 85467431 85477829 + Tcp11l2 protein_coding retained_intron MGP_129S1SvImJ_T0012404.1 MGP_129S1SvImJ_G0010493.1 mouse_genomes_project 10 8761914 8762643 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000838.1 MGP_129S1SvImJ_G0000772.1 mouse_genomes_project 10 19887470 19889541 - TEC TEC MGP_129S1SvImJ_T0102118.1 MGP_129S1SvImJ_G0039953.1 mouse_genomes_project 10 133259597 133260038 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0006117.1 MGP_129S1SvImJ_G0005123.1 mouse_genomes_project 10 62876812 62891818 + Gm16145 lincRNA lincRNA MGP_129S1SvImJ_T0024525.1 MGP_129S1SvImJ_G0016999.1 mouse_genomes_project 10 4994096 5007135 - MGP_129S1SvImJ_P0024525 Ginm1 protein_coding protein_coding MGP_129S1SvImJ_T0024526.1 MGP_129S1SvImJ_G0016999.1 mouse_genomes_project 10 4994099 4996722 - Ginm1 protein_coding retained_intron MGP_129S1SvImJ_T0024527.1 MGP_129S1SvImJ_G0016999.1 mouse_genomes_project 10 4994105 5007109 - MGP_129S1SvImJ_P0024527 Ginm1 protein_coding protein_coding MGP_129S1SvImJ_T0024528.1 MGP_129S1SvImJ_G0016999.1 mouse_genomes_project 10 5005516 5019045 - Ginm1 protein_coding processed_transcript MGP_129S1SvImJ_T0024529.1 MGP_129S1SvImJ_G0016999.1 mouse_genomes_project 10 5017663 5019069 - Ginm1 protein_coding processed_transcript MGP_129S1SvImJ_T0024530.1 MGP_129S1SvImJ_G0016999.1 mouse_genomes_project 10 5018767 5019067 - MGP_129S1SvImJ_P0024530 Ginm1 protein_coding protein_coding MGP_129S1SvImJ_T0025637.1 MGP_129S1SvImJ_G0017338.1 mouse_genomes_project 10 70381499 70502843 + MGP_129S1SvImJ_P0025637 Fam13c protein_coding protein_coding MGP_129S1SvImJ_T0025638.1 MGP_129S1SvImJ_G0017338.1 mouse_genomes_project 10 70381711 70502843 + MGP_129S1SvImJ_P0025638 Fam13c protein_coding protein_coding MGP_129S1SvImJ_T0025639.1 MGP_129S1SvImJ_G0017338.1 mouse_genomes_project 10 70381757 70502845 + MGP_129S1SvImJ_P0025639 Fam13c protein_coding protein_coding MGP_129S1SvImJ_T0026725.1 MGP_129S1SvImJ_G0017621.1 mouse_genomes_project 10 89159942 89161246 + MGP_129S1SvImJ_P0026725 Pmch protein_coding protein_coding MGP_129S1SvImJ_T0025880.1 MGP_129S1SvImJ_G0017394.1 mouse_genomes_project 10 77553814 77555262 - MGP_129S1SvImJ_P0025880 Gm10941 protein_coding protein_coding MGP_129S1SvImJ_T0017126.1 MGP_129S1SvImJ_G0015131.1 mouse_genomes_project 10 18270222 18274192 - 4930403O15Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0009620.1 MGP_129S1SvImJ_G0007736.1 mouse_genomes_project 10 82130555 82130613 - Mir1191b miRNA miRNA MGP_129S1SvImJ_T0025949.1 MGP_129S1SvImJ_G0017413.1 mouse_genomes_project 10 78390309 78415029 - MGP_129S1SvImJ_P0025949 Pfkl protein_coding protein_coding MGP_129S1SvImJ_T0025950.1 MGP_129S1SvImJ_G0017413.1 mouse_genomes_project 10 78393852 78395566 - Pfkl protein_coding retained_intron MGP_129S1SvImJ_T0025951.1 MGP_129S1SvImJ_G0017413.1 mouse_genomes_project 10 78402453 78405151 - Pfkl protein_coding retained_intron MGP_129S1SvImJ_T0025952.1 MGP_129S1SvImJ_G0017413.1 mouse_genomes_project 10 78405896 78415305 - Pfkl protein_coding processed_transcript MGP_129S1SvImJ_T0027579.1 MGP_129S1SvImJ_G0017902.1 mouse_genomes_project 10 133085123 133092357 + MGP_129S1SvImJ_P0027579 Olfr774 protein_coding protein_coding MGP_129S1SvImJ_T0003098.1 MGP_129S1SvImJ_G0002892.1 mouse_genomes_project 10 89528497 89534149 - Gm16235 antisense antisense MGP_129S1SvImJ_T0003099.1 MGP_129S1SvImJ_G0002892.1 mouse_genomes_project 10 89529415 89530196 - Gm16235 antisense antisense MGP_129S1SvImJ_T0024775.1 MGP_129S1SvImJ_G0017067.1 mouse_genomes_project 10 20180763 20181430 - MGP_129S1SvImJ_P0024775 protein_coding protein_coding MGP_129S1SvImJ_T0027412.1 MGP_129S1SvImJ_G0017832.1 mouse_genomes_project 10 131350841 131360279 + MGP_129S1SvImJ_P0027412 Tac2 protein_coding protein_coding MGP_129S1SvImJ_T0027413.1 MGP_129S1SvImJ_G0017832.1 mouse_genomes_project 10 131351755 131360279 + MGP_129S1SvImJ_P0027413 Tac2 protein_coding protein_coding MGP_129S1SvImJ_T0009602.1 MGP_129S1SvImJ_G0007718.1 mouse_genomes_project 10 62133928 62133979 + Mir7215 miRNA miRNA MGP_129S1SvImJ_T0027622.1 MGP_129S1SvImJ_G0017931.1 mouse_genomes_project 10 133674649 133675881 + MGP_129S1SvImJ_P0027622 protein_coding protein_coding MGP_129S1SvImJ_T0026133.1 MGP_129S1SvImJ_G0017474.1 mouse_genomes_project 10 80542085 80548555 + MGP_129S1SvImJ_P0026133 Grin3b protein_coding protein_coding MGP_129S1SvImJ_T0026134.1 MGP_129S1SvImJ_G0017474.1 mouse_genomes_project 10 80545101 80548080 + MGP_129S1SvImJ_P0026134 Grin3b protein_coding protein_coding MGP_129S1SvImJ_T0026135.1 MGP_129S1SvImJ_G0017474.1 mouse_genomes_project 10 80545773 80548489 + MGP_129S1SvImJ_P0026135 Grin3b protein_coding protein_coding MGP_129S1SvImJ_T0025019.1 MGP_129S1SvImJ_G0017167.1 mouse_genomes_project 10 39447480 39501975 - MGP_129S1SvImJ_P0025019 Cdc40 protein_coding protein_coding MGP_129S1SvImJ_T0025013.1 MGP_129S1SvImJ_G0017163.1 mouse_genomes_project 10 38907233 39069331 + MGP_129S1SvImJ_P0025013 Cdk19 protein_coding protein_coding MGP_129S1SvImJ_T0025014.1 MGP_129S1SvImJ_G0017163.1 mouse_genomes_project 10 38907233 39069331 + MGP_129S1SvImJ_P0025014 Cdk19 protein_coding protein_coding MGP_129S1SvImJ_T0025733.1 MGP_129S1SvImJ_G0017351.1 mouse_genomes_project 10 75197272 75328946 + MGP_129S1SvImJ_P0025733 Bcr protein_coding protein_coding MGP_129S1SvImJ_T0000860.1 MGP_129S1SvImJ_G0000793.1 mouse_genomes_project 10 123470513 123473009 + TEC TEC MGP_129S1SvImJ_T0027536.1 MGP_129S1SvImJ_G0017878.1 mouse_genomes_project 10 132467000 132474132 - MGP_129S1SvImJ_P0027536 Cdk2 protein_coding protein_coding MGP_129S1SvImJ_T0027537.1 MGP_129S1SvImJ_G0017878.1 mouse_genomes_project 10 132467000 132474132 - MGP_129S1SvImJ_P0027537 Cdk2 protein_coding protein_coding MGP_129S1SvImJ_T0025865.1 MGP_129S1SvImJ_G0017391.1 mouse_genomes_project 10 77284635 77295559 + MGP_129S1SvImJ_P0025865 Gm10787 protein_coding protein_coding MGP_129S1SvImJ_T0099157.1 MGP_129S1SvImJ_G0037224.1 mouse_genomes_project 10 9725385 9725550 + Gm23680 snRNA snRNA MGP_129S1SvImJ_T0012418.1 MGP_129S1SvImJ_G0010507.1 mouse_genomes_project 10 29870920 29872223 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0025381.1 MGP_129S1SvImJ_G0017281.1 mouse_genomes_project 10 60824401 60826094 - MGP_129S1SvImJ_P0025381 D830039M14Rik protein_coding protein_coding MGP_129S1SvImJ_T0026327.1 MGP_129S1SvImJ_G0017517.1 mouse_genomes_project 10 81404577 81448459 + MGP_129S1SvImJ_P0026327 Dot1l protein_coding protein_coding MGP_129S1SvImJ_T0026328.1 MGP_129S1SvImJ_G0017517.1 mouse_genomes_project 10 81404579 81447385 + MGP_129S1SvImJ_P0026328 Dot1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026329.1 MGP_129S1SvImJ_G0017517.1 mouse_genomes_project 10 81404834 81415974 + Dot1l protein_coding retained_intron MGP_129S1SvImJ_T0026330.1 MGP_129S1SvImJ_G0017517.1 mouse_genomes_project 10 81429067 81447389 + MGP_129S1SvImJ_P0026330 Dot1l protein_coding protein_coding MGP_129S1SvImJ_T0026331.1 MGP_129S1SvImJ_G0017517.1 mouse_genomes_project 10 81436670 81437928 + Dot1l protein_coding retained_intron MGP_129S1SvImJ_T0026332.1 MGP_129S1SvImJ_G0017517.1 mouse_genomes_project 10 81440569 81447345 + MGP_129S1SvImJ_P0026332 Dot1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026333.1 MGP_129S1SvImJ_G0017517.1 mouse_genomes_project 10 81444451 81446816 + MGP_129S1SvImJ_P0026333 Dot1l protein_coding protein_coding MGP_129S1SvImJ_T0026054.1 MGP_129S1SvImJ_G0017454.1 mouse_genomes_project 10 80246605 80254001 + MGP_129S1SvImJ_P0026054 Bsg protein_coding protein_coding MGP_129S1SvImJ_T0026055.1 MGP_129S1SvImJ_G0017454.1 mouse_genomes_project 10 80246613 80252834 + Bsg protein_coding processed_transcript MGP_129S1SvImJ_T0026056.1 MGP_129S1SvImJ_G0017454.1 mouse_genomes_project 10 80246623 80254083 + MGP_129S1SvImJ_P0026056 Bsg protein_coding protein_coding MGP_129S1SvImJ_T0026057.1 MGP_129S1SvImJ_G0017454.1 mouse_genomes_project 10 80252210 80253816 + Bsg protein_coding retained_intron MGP_129S1SvImJ_T0100441.1 MGP_129S1SvImJ_G0038508.1 mouse_genomes_project 10 71911574 71911705 + Gm22937 snoRNA snoRNA MGP_129S1SvImJ_T0027417.1 MGP_129S1SvImJ_G0017836.1 mouse_genomes_project 10 131391556 131448952 + MGP_129S1SvImJ_P0027417 protein_coding protein_coding MGP_129S1SvImJ_T0100410.1 MGP_129S1SvImJ_G0038477.1 mouse_genomes_project 10 9012017 9012147 + Gm22546 snoRNA snoRNA MGP_129S1SvImJ_T0026543.1 MGP_129S1SvImJ_G0017568.1 mouse_genomes_project 10 82342543 82358470 + BC025920 protein_coding processed_transcript MGP_129S1SvImJ_T0026544.1 MGP_129S1SvImJ_G0017568.1 mouse_genomes_project 10 82342576 82346110 + MGP_129S1SvImJ_P0026544 BC025920 protein_coding protein_coding MGP_129S1SvImJ_T0026545.1 MGP_129S1SvImJ_G0017568.1 mouse_genomes_project 10 82343156 82345819 + MGP_129S1SvImJ_P0026545 BC025920 protein_coding protein_coding MGP_129S1SvImJ_T0026546.1 MGP_129S1SvImJ_G0017568.1 mouse_genomes_project 10 82343156 82345819 + MGP_129S1SvImJ_P0026546 BC025920 protein_coding protein_coding MGP_129S1SvImJ_T0026547.1 MGP_129S1SvImJ_G0017568.1 mouse_genomes_project 10 82343298 82346083 + MGP_129S1SvImJ_P0026547 BC025920 protein_coding protein_coding MGP_129S1SvImJ_T0027443.1 MGP_129S1SvImJ_G0017847.1 mouse_genomes_project 10 131758822 131766995 + MGP_129S1SvImJ_P0027443 Atp5b protein_coding protein_coding MGP_129S1SvImJ_T0027444.1 MGP_129S1SvImJ_G0017847.1 mouse_genomes_project 10 131758855 131759637 + Atp5b protein_coding processed_transcript MGP_129S1SvImJ_T0027445.1 MGP_129S1SvImJ_G0017847.1 mouse_genomes_project 10 131759983 131762583 + Atp5b protein_coding retained_intron MGP_129S1SvImJ_T0027446.1 MGP_129S1SvImJ_G0017847.1 mouse_genomes_project 10 131762379 131766764 + Atp5b protein_coding retained_intron MGP_129S1SvImJ_T0027447.1 MGP_129S1SvImJ_G0017847.1 mouse_genomes_project 10 131762863 131765756 + Atp5b protein_coding processed_transcript MGP_129S1SvImJ_T0027448.1 MGP_129S1SvImJ_G0017847.1 mouse_genomes_project 10 131764284 131765655 + Atp5b protein_coding retained_intron MGP_129S1SvImJ_T0027449.1 MGP_129S1SvImJ_G0017847.1 mouse_genomes_project 10 131765094 131766285 + Atp5b protein_coding retained_intron MGP_129S1SvImJ_T0027450.1 MGP_129S1SvImJ_G0017847.1 mouse_genomes_project 10 131765155 131766877 + Atp5b protein_coding processed_transcript MGP_129S1SvImJ_T0027451.1 MGP_129S1SvImJ_G0017847.1 mouse_genomes_project 10 131765644 131766876 + Atp5b protein_coding processed_transcript MGP_129S1SvImJ_T0025737.1 MGP_129S1SvImJ_G0017354.1 mouse_genomes_project 10 75510848 75692698 - MGP_129S1SvImJ_P0025737 Gucd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025741.1 MGP_129S1SvImJ_G0017354.1 mouse_genomes_project 10 75587540 75686706 - MGP_129S1SvImJ_P0025741 Gucd1 protein_coding protein_coding MGP_129S1SvImJ_T0025743.1 MGP_129S1SvImJ_G0017354.1 mouse_genomes_project 10 75682237 75692621 - MGP_129S1SvImJ_P0025743 Gucd1 protein_coding protein_coding MGP_129S1SvImJ_T0025744.1 MGP_129S1SvImJ_G0017354.1 mouse_genomes_project 10 75684222 75692714 - MGP_129S1SvImJ_P0025744 Gucd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025745.1 MGP_129S1SvImJ_G0017354.1 mouse_genomes_project 10 75684256 75686689 - Gucd1 protein_coding retained_intron MGP_129S1SvImJ_T0025746.1 MGP_129S1SvImJ_G0017354.1 mouse_genomes_project 10 75684389 75692595 - MGP_129S1SvImJ_P0025746 Gucd1 protein_coding protein_coding MGP_129S1SvImJ_T0025747.1 MGP_129S1SvImJ_G0017354.1 mouse_genomes_project 10 75685141 75693277 - MGP_129S1SvImJ_P0025747 Gucd1 protein_coding protein_coding MGP_129S1SvImJ_T0025748.1 MGP_129S1SvImJ_G0017354.1 mouse_genomes_project 10 75686604 75692685 - MGP_129S1SvImJ_P0025748 Gucd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0100446.1 MGP_129S1SvImJ_G0038513.1 mouse_genomes_project 10 92407375 92407621 - Gm24119 snoRNA snoRNA MGP_129S1SvImJ_T0003094.1 MGP_129S1SvImJ_G0002889.1 mouse_genomes_project 10 87893403 87894656 + Gm16280 antisense antisense MGP_129S1SvImJ_T0024832.1 MGP_129S1SvImJ_G0017097.1 mouse_genomes_project 10 23186111 23258860 - Akap7 protein_coding processed_transcript MGP_129S1SvImJ_T0024833.1 MGP_129S1SvImJ_G0017097.1 mouse_genomes_project 10 23186111 23218194 - MGP_129S1SvImJ_P0024833 Akap7 protein_coding protein_coding MGP_129S1SvImJ_T0024834.1 MGP_129S1SvImJ_G0017097.1 mouse_genomes_project 10 23187138 23321682 - MGP_129S1SvImJ_P0024834 Akap7 protein_coding protein_coding MGP_129S1SvImJ_T0024835.1 MGP_129S1SvImJ_G0017097.1 mouse_genomes_project 10 23237288 23311133 - MGP_129S1SvImJ_P0024835 Akap7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0024836.1 MGP_129S1SvImJ_G0017097.1 mouse_genomes_project 10 23287823 23318614 - MGP_129S1SvImJ_P0024836 Akap7 protein_coding protein_coding MGP_129S1SvImJ_T0024837.1 MGP_129S1SvImJ_G0017097.1 mouse_genomes_project 10 23300825 23321625 - MGP_129S1SvImJ_P0024837 Akap7 protein_coding protein_coding MGP_129S1SvImJ_T0024838.1 MGP_129S1SvImJ_G0017097.1 mouse_genomes_project 10 23305418 23319586 - MGP_129S1SvImJ_P0024838 Akap7 protein_coding protein_coding MGP_129S1SvImJ_T0024839.1 MGP_129S1SvImJ_G0017097.1 mouse_genomes_project 10 23305519 23331402 - MGP_129S1SvImJ_P0024839 Akap7 protein_coding protein_coding MGP_129S1SvImJ_T0003069.1 MGP_129S1SvImJ_G0002870.1 mouse_genomes_project 10 76625411 76638836 + 1700094J05Rik antisense antisense MGP_129S1SvImJ_T0003070.1 MGP_129S1SvImJ_G0002870.1 mouse_genomes_project 10 76634984 76635352 + 1700094J05Rik antisense antisense MGP_129S1SvImJ_T0026325.1 MGP_129S1SvImJ_G0017515.1 mouse_genomes_project 10 81342744 81345434 + MGP_129S1SvImJ_P0026325 Izumo4 protein_coding protein_coding MGP_129S1SvImJ_T0000855.1 MGP_129S1SvImJ_G0000788.1 mouse_genomes_project 10 114263849 114264147 + TEC TEC MGP_129S1SvImJ_T0026097.1 MGP_129S1SvImJ_G0017464.1 mouse_genomes_project 10 80416712 80429719 - MGP_129S1SvImJ_P0026097 Plppr3 protein_coding protein_coding MGP_129S1SvImJ_T0026099.1 MGP_129S1SvImJ_G0017464.1 mouse_genomes_project 10 80420017 80429515 - Plppr3 protein_coding retained_intron MGP_129S1SvImJ_T0026100.1 MGP_129S1SvImJ_G0017464.1 mouse_genomes_project 10 80420017 80429719 - Plppr3 protein_coding retained_intron MGP_129S1SvImJ_T0026101.1 MGP_129S1SvImJ_G0017464.1 mouse_genomes_project 10 80420017 80429783 - MGP_129S1SvImJ_P0026101 Plppr3 protein_coding protein_coding MGP_129S1SvImJ_T0026102.1 MGP_129S1SvImJ_G0017464.1 mouse_genomes_project 10 80421648 80422518 - Plppr3 protein_coding retained_intron MGP_129S1SvImJ_T0026103.1 MGP_129S1SvImJ_G0017464.1 mouse_genomes_project 10 80421668 80429373 - MGP_129S1SvImJ_P0026103 Plppr3 protein_coding protein_coding MGP_129S1SvImJ_T0026104.1 MGP_129S1SvImJ_G0017464.1 mouse_genomes_project 10 80421674 80429557 - MGP_129S1SvImJ_P0026104 Plppr3 protein_coding protein_coding MGP_129S1SvImJ_T0026105.1 MGP_129S1SvImJ_G0017464.1 mouse_genomes_project 10 80422090 80429538 - Plppr3 protein_coding processed_transcript MGP_129S1SvImJ_T0026106.1 MGP_129S1SvImJ_G0017464.1 mouse_genomes_project 10 80422144 80429548 - MGP_129S1SvImJ_P0026106 Plppr3 protein_coding protein_coding MGP_129S1SvImJ_T0026107.1 MGP_129S1SvImJ_G0017464.1 mouse_genomes_project 10 80422695 80429519 - MGP_129S1SvImJ_P0026107 Plppr3 protein_coding protein_coding MGP_129S1SvImJ_T0000840.1 MGP_129S1SvImJ_G0000774.1 mouse_genomes_project 10 35561494 35561841 + TEC TEC MGP_129S1SvImJ_T0027036.1 MGP_129S1SvImJ_G0017705.1 mouse_genomes_project 10 108568887 109081788 + MGP_129S1SvImJ_P0027036 Ppfia2 protein_coding protein_coding MGP_129S1SvImJ_T0027037.1 MGP_129S1SvImJ_G0017705.1 mouse_genomes_project 10 108568923 108891932 + MGP_129S1SvImJ_P0027037 Ppfia2 protein_coding protein_coding MGP_129S1SvImJ_T0027335.1 MGP_129S1SvImJ_G0017812.1 mouse_genomes_project 10 130780523 130795097 - MGP_129S1SvImJ_P0027335 Pip4k2c protein_coding protein_coding MGP_129S1SvImJ_T0006095.1 MGP_129S1SvImJ_G0005104.1 mouse_genomes_project 10 15906719 15909692 + Gm10827 lincRNA lincRNA MGP_129S1SvImJ_T0006184.1 MGP_129S1SvImJ_G0005164.1 mouse_genomes_project 10 132246409 132251299 + A430046D13Rik lincRNA lincRNA MGP_129S1SvImJ_T0027620.1 MGP_129S1SvImJ_G0017930.1 mouse_genomes_project 10 133673551 133675280 + MGP_129S1SvImJ_P0027620 Olfr809 protein_coding protein_coding MGP_129S1SvImJ_T0027621.1 MGP_129S1SvImJ_G0017930.1 mouse_genomes_project 10 133674635 133675845 + MGP_129S1SvImJ_P0027621 Olfr809 protein_coding protein_coding MGP_129S1SvImJ_T0098292.1 MGP_129S1SvImJ_G0036377.1 mouse_genomes_project 10 70216575 70219195 - pseudogene pseudogene MGP_129S1SvImJ_T0006089.1 MGP_129S1SvImJ_G0005100.1 mouse_genomes_project 10 8612458 8650881 - 4930432B10Rik lincRNA lincRNA MGP_129S1SvImJ_T0006090.1 MGP_129S1SvImJ_G0005100.1 mouse_genomes_project 10 8623068 8651103 - 4930432B10Rik lincRNA lincRNA MGP_129S1SvImJ_T0027634.1 MGP_129S1SvImJ_G0017941.1 mouse_genomes_project 10 133896737 133906691 - MGP_129S1SvImJ_P0027634 protein_coding protein_coding MGP_129S1SvImJ_T0012464.1 MGP_129S1SvImJ_G0010553.1 mouse_genomes_project 10 131608262 131608549 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0027644.1 MGP_129S1SvImJ_G0017950.1 mouse_genomes_project 10 134400658 134407643 - MGP_129S1SvImJ_P0027644 protein_coding protein_coding MGP_129S1SvImJ_T0026445.1 MGP_129S1SvImJ_G0017552.1 mouse_genomes_project 10 82050270 82055648 - MGP_129S1SvImJ_P0026445 Gipc3 protein_coding protein_coding MGP_129S1SvImJ_T0027236.1 MGP_129S1SvImJ_G0017776.1 mouse_genomes_project 10 123961294 123974335 + MGP_129S1SvImJ_P0027236 4921513I03Rik protein_coding protein_coding MGP_129S1SvImJ_T0027125.1 MGP_129S1SvImJ_G0017743.1 mouse_genomes_project 10 118865029 118867283 - MGP_129S1SvImJ_P0027125 4933416C03Rik protein_coding protein_coding MGP_129S1SvImJ_T0100413.1 MGP_129S1SvImJ_G0038480.1 mouse_genomes_project 10 11704129 11704240 + Gm24343 snoRNA snoRNA MGP_129S1SvImJ_T0024953.1 MGP_129S1SvImJ_G0017147.1 mouse_genomes_project 10 37430544 37476399 + Lama4 protein_coding retained_intron MGP_129S1SvImJ_T0024954.1 MGP_129S1SvImJ_G0017147.1 mouse_genomes_project 10 37430544 37601087 + MGP_129S1SvImJ_P0024954 Lama4 protein_coding protein_coding MGP_129S1SvImJ_T0024955.1 MGP_129S1SvImJ_G0017147.1 mouse_genomes_project 10 37430582 37514995 + Lama4 protein_coding retained_intron MGP_129S1SvImJ_T0024956.1 MGP_129S1SvImJ_G0017147.1 mouse_genomes_project 10 37430599 37503020 + Lama4 protein_coding retained_intron MGP_129S1SvImJ_T0024957.1 MGP_129S1SvImJ_G0017147.1 mouse_genomes_project 10 37430701 37522267 + Lama4 protein_coding retained_intron MGP_129S1SvImJ_T0024958.1 MGP_129S1SvImJ_G0017147.1 mouse_genomes_project 10 37521552 37525415 + Lama4 protein_coding retained_intron MGP_129S1SvImJ_T0024959.1 MGP_129S1SvImJ_G0017147.1 mouse_genomes_project 10 37596691 37600996 + Lama4 protein_coding retained_intron MGP_129S1SvImJ_T0003083.1 MGP_129S1SvImJ_G0002880.1 mouse_genomes_project 10 82123890 82125895 + Gm16104 antisense antisense MGP_129S1SvImJ_T0100415.1 MGP_129S1SvImJ_G0038482.1 mouse_genomes_project 10 19698938 19699047 - Gm23839 snoRNA snoRNA MGP_129S1SvImJ_T0006126.1 MGP_129S1SvImJ_G0005128.1 mouse_genomes_project 10 66634529 66637227 + Gm26576 lincRNA lincRNA MGP_129S1SvImJ_T0026392.1 MGP_129S1SvImJ_G0017537.1 mouse_genomes_project 10 81827187 81836481 + MGP_129S1SvImJ_P0026392 Zbtb7a protein_coding protein_coding MGP_129S1SvImJ_T0026393.1 MGP_129S1SvImJ_G0017537.1 mouse_genomes_project 10 81828238 81844207 + MGP_129S1SvImJ_P0026393 Zbtb7a protein_coding protein_coding MGP_129S1SvImJ_T0026394.1 MGP_129S1SvImJ_G0017537.1 mouse_genomes_project 10 81828516 81840428 + MGP_129S1SvImJ_P0026394 Zbtb7a protein_coding protein_coding MGP_129S1SvImJ_T0026395.1 MGP_129S1SvImJ_G0017537.1 mouse_genomes_project 10 81828533 81836092 + MGP_129S1SvImJ_P0026395 Zbtb7a protein_coding protein_coding MGP_129S1SvImJ_T0026396.1 MGP_129S1SvImJ_G0017537.1 mouse_genomes_project 10 81828545 81844980 + MGP_129S1SvImJ_P0026396 Zbtb7a protein_coding protein_coding MGP_129S1SvImJ_T0026397.1 MGP_129S1SvImJ_G0017537.1 mouse_genomes_project 10 81829937 81840443 + MGP_129S1SvImJ_P0026397 Zbtb7a protein_coding protein_coding MGP_129S1SvImJ_T0027508.1 MGP_129S1SvImJ_G0017866.1 mouse_genomes_project 10 132200818 132234015 + MGP_129S1SvImJ_P0027508 Smarcc2 protein_coding protein_coding MGP_129S1SvImJ_T0027509.1 MGP_129S1SvImJ_G0017866.1 mouse_genomes_project 10 132200818 132234015 + MGP_129S1SvImJ_P0027509 Smarcc2 protein_coding protein_coding MGP_129S1SvImJ_T0027510.1 MGP_129S1SvImJ_G0017866.1 mouse_genomes_project 10 132200818 132234015 + MGP_129S1SvImJ_P0027510 Smarcc2 protein_coding protein_coding MGP_129S1SvImJ_T0027160.1 MGP_129S1SvImJ_G0017755.1 mouse_genomes_project 10 120094642 120101060 - MGP_129S1SvImJ_P0027160 9530003J23Rik protein_coding protein_coding MGP_129S1SvImJ_T0027161.1 MGP_129S1SvImJ_G0017755.1 mouse_genomes_project 10 120096166 120101109 - MGP_129S1SvImJ_P0027161 9530003J23Rik protein_coding protein_coding MGP_129S1SvImJ_T0024901.1 MGP_129S1SvImJ_G0017120.1 mouse_genomes_project 10 29483034 29485940 + MGP_129S1SvImJ_P0024901 Gm5422 protein_coding protein_coding MGP_129S1SvImJ_T0025011.1 MGP_129S1SvImJ_G0017161.1 mouse_genomes_project 10 38796021 38804512 - MGP_129S1SvImJ_P0025011 Gtf3c6 protein_coding protein_coding MGP_129S1SvImJ_T0024805.1 MGP_129S1SvImJ_G0017086.1 mouse_genomes_project 10 22016116 22025980 + MGP_129S1SvImJ_P0024805 protein_coding protein_coding MGP_129S1SvImJ_T0026022.1 MGP_129S1SvImJ_G0017442.1 mouse_genomes_project 10 79639605 79665863 + MGP_129S1SvImJ_P0026022 protein_coding protein_coding MGP_129S1SvImJ_T0026569.1 MGP_129S1SvImJ_G0017573.1 mouse_genomes_project 10 82774158 82799885 + MGP_129S1SvImJ_P0026569 AU041133 protein_coding protein_coding MGP_129S1SvImJ_T0026570.1 MGP_129S1SvImJ_G0017573.1 mouse_genomes_project 10 82784409 82798831 + MGP_129S1SvImJ_P0026570 AU041133 protein_coding protein_coding MGP_129S1SvImJ_T0024848.1 MGP_129S1SvImJ_G0017102.1 mouse_genomes_project 10 24271496 24318259 + MGP_129S1SvImJ_P0024848 Samd3 protein_coding protein_coding MGP_129S1SvImJ_T0024849.1 MGP_129S1SvImJ_G0017102.1 mouse_genomes_project 10 24271496 24304954 + MGP_129S1SvImJ_P0024849 Samd3 protein_coding protein_coding MGP_129S1SvImJ_T0027414.1 MGP_129S1SvImJ_G0017833.1 mouse_genomes_project 10 131367984 131379115 + MGP_129S1SvImJ_P0027414 Zbtb39 protein_coding protein_coding MGP_129S1SvImJ_T0006145.1 MGP_129S1SvImJ_G0005144.1 mouse_genomes_project 10 93403390 93438047 - Rmst lincRNA lincRNA MGP_129S1SvImJ_T0006146.1 MGP_129S1SvImJ_G0005144.1 mouse_genomes_project 10 93403396 93404071 - Rmst lincRNA lincRNA MGP_129S1SvImJ_T0006147.1 MGP_129S1SvImJ_G0005144.1 mouse_genomes_project 10 93403484 93437900 - Rmst lincRNA lincRNA MGP_129S1SvImJ_T0006148.1 MGP_129S1SvImJ_G0005144.1 mouse_genomes_project 10 93409273 93409780 - Rmst lincRNA lincRNA MGP_129S1SvImJ_T0006149.1 MGP_129S1SvImJ_G0005144.1 mouse_genomes_project 10 93415857 93500666 - Rmst lincRNA lincRNA MGP_129S1SvImJ_T0006150.1 MGP_129S1SvImJ_G0005144.1 mouse_genomes_project 10 93415857 93499117 - Rmst lincRNA lincRNA MGP_129S1SvImJ_T0006151.1 MGP_129S1SvImJ_G0005144.1 mouse_genomes_project 10 93418000 93499035 - Rmst lincRNA lincRNA MGP_129S1SvImJ_T0006152.1 MGP_129S1SvImJ_G0005144.1 mouse_genomes_project 10 93467171 93500663 - Rmst lincRNA lincRNA MGP_129S1SvImJ_T0006153.1 MGP_129S1SvImJ_G0005144.1 mouse_genomes_project 10 93468874 93470184 - Rmst lincRNA lincRNA MGP_129S1SvImJ_T0006154.1 MGP_129S1SvImJ_G0005144.1 mouse_genomes_project 10 93468894 93497532 - Rmst lincRNA lincRNA MGP_129S1SvImJ_T0006155.1 MGP_129S1SvImJ_G0005144.1 mouse_genomes_project 10 93468920 93499314 - Rmst lincRNA lincRNA MGP_129S1SvImJ_T0006157.1 MGP_129S1SvImJ_G0005144.1 mouse_genomes_project 10 93496492 93497150 - Rmst lincRNA lincRNA MGP_129S1SvImJ_T0006158.1 MGP_129S1SvImJ_G0005144.1 mouse_genomes_project 10 93496492 93496552 - Rmst lincRNA misc_RNA MGP_129S1SvImJ_T0006159.1 MGP_129S1SvImJ_G0005144.1 mouse_genomes_project 10 93496535 93500666 - Rmst lincRNA lincRNA MGP_129S1SvImJ_T0006164.1 MGP_129S1SvImJ_G0005150.1 mouse_genomes_project 10 97352100 97408514 + 4732465J04Rik lincRNA lincRNA MGP_129S1SvImJ_T0006165.1 MGP_129S1SvImJ_G0005150.1 mouse_genomes_project 10 97389463 97408919 + 4732465J04Rik lincRNA lincRNA MGP_129S1SvImJ_T0027111.1 MGP_129S1SvImJ_G0017739.1 mouse_genomes_project 10 118161766 118305191 - MGP_129S1SvImJ_P0027111 Lgr5 protein_coding protein_coding MGP_129S1SvImJ_T0027112.1 MGP_129S1SvImJ_G0017739.1 mouse_genomes_project 10 118163469 118304904 - MGP_129S1SvImJ_P0027112 Lgr5 protein_coding protein_coding MGP_129S1SvImJ_T0027113.1 MGP_129S1SvImJ_G0017739.1 mouse_genomes_project 10 118163469 118304904 - MGP_129S1SvImJ_P0027113 Lgr5 protein_coding protein_coding MGP_129S1SvImJ_T0027114.1 MGP_129S1SvImJ_G0017739.1 mouse_genomes_project 10 118168103 118170455 - Lgr5 protein_coding retained_intron MGP_129S1SvImJ_T0027115.1 MGP_129S1SvImJ_G0017739.1 mouse_genomes_project 10 118169300 118174545 - Lgr5 protein_coding retained_intron MGP_129S1SvImJ_T0027116.1 MGP_129S1SvImJ_G0017739.1 mouse_genomes_project 10 118174138 118305170 - Lgr5 protein_coding retained_intron MGP_129S1SvImJ_T0027117.1 MGP_129S1SvImJ_G0017739.1 mouse_genomes_project 10 118186190 118305170 - Lgr5 protein_coding retained_intron MGP_129S1SvImJ_T0027118.1 MGP_129S1SvImJ_G0017739.1 mouse_genomes_project 10 118235905 118305154 - Lgr5 protein_coding processed_transcript MGP_129S1SvImJ_T0026444.1 MGP_129S1SvImJ_G0017551.1 mouse_genomes_project 10 82041123 82047777 + MGP_129S1SvImJ_P0026444 Tbxa2r protein_coding protein_coding MGP_129S1SvImJ_T0099217.1 MGP_129S1SvImJ_G0037284.1 mouse_genomes_project 10 132019209 132019315 - Gm23241 snRNA snRNA MGP_129S1SvImJ_T0026954.1 MGP_129S1SvImJ_G0017670.1 mouse_genomes_project 10 97081924 97130094 + MGP_129S1SvImJ_P0026954 Ube2n protein_coding protein_coding MGP_129S1SvImJ_T0026776.1 MGP_129S1SvImJ_G0017634.1 mouse_genomes_project 10 90084658 90406930 - MGP_129S1SvImJ_P0026776 Ano4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026777.1 MGP_129S1SvImJ_G0017634.1 mouse_genomes_project 10 90084659 90406730 - MGP_129S1SvImJ_P0026777 Ano4 protein_coding protein_coding MGP_129S1SvImJ_T0026778.1 MGP_129S1SvImJ_G0017634.1 mouse_genomes_project 10 90084665 90406762 - MGP_129S1SvImJ_P0026778 Ano4 protein_coding protein_coding MGP_129S1SvImJ_T0026779.1 MGP_129S1SvImJ_G0017634.1 mouse_genomes_project 10 90084666 90406440 - MGP_129S1SvImJ_P0026779 Ano4 protein_coding protein_coding MGP_129S1SvImJ_T0026780.1 MGP_129S1SvImJ_G0017634.1 mouse_genomes_project 10 90121228 90141096 - MGP_129S1SvImJ_P0026780 Ano4 protein_coding protein_coding MGP_129S1SvImJ_T0026781.1 MGP_129S1SvImJ_G0017634.1 mouse_genomes_project 10 90135822 90165654 - Ano4 protein_coding processed_transcript MGP_129S1SvImJ_T0026782.1 MGP_129S1SvImJ_G0017634.1 mouse_genomes_project 10 90156212 90406694 - Ano4 protein_coding retained_intron MGP_129S1SvImJ_T0026783.1 MGP_129S1SvImJ_G0017634.1 mouse_genomes_project 10 90175717 90498055 - MGP_129S1SvImJ_P0026783 Ano4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026784.1 MGP_129S1SvImJ_G0017634.1 mouse_genomes_project 10 90204927 90406730 - MGP_129S1SvImJ_P0026784 Ano4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026785.1 MGP_129S1SvImJ_G0017634.1 mouse_genomes_project 10 90205479 90406276 - MGP_129S1SvImJ_P0026785 Ano4 protein_coding protein_coding MGP_129S1SvImJ_T0026786.1 MGP_129S1SvImJ_G0017634.1 mouse_genomes_project 10 90227447 90466653 - MGP_129S1SvImJ_P0026786 Ano4 protein_coding protein_coding MGP_129S1SvImJ_T0026787.1 MGP_129S1SvImJ_G0017634.1 mouse_genomes_project 10 90488454 90498172 - Ano4 protein_coding processed_transcript MGP_129S1SvImJ_T0006101.1 MGP_129S1SvImJ_G0005107.1 mouse_genomes_project 10 19548774 19551914 + Gm29323 lincRNA lincRNA MGP_129S1SvImJ_T0024445.1 MGP_129S1SvImJ_G0016986.1 mouse_genomes_project 10 2887377 2893806 - MGP_129S1SvImJ_P0024445 Fbxo5 protein_coding protein_coding MGP_129S1SvImJ_T0024446.1 MGP_129S1SvImJ_G0016986.1 mouse_genomes_project 10 2890417 2892816 - Fbxo5 protein_coding processed_transcript MGP_129S1SvImJ_T0003117.1 MGP_129S1SvImJ_G0002903.1 mouse_genomes_project 10 122858831 122874457 - Grip1os2 antisense antisense MGP_129S1SvImJ_T0026730.1 MGP_129S1SvImJ_G0017623.1 mouse_genomes_project 10 89215010 89247732 + MGP_129S1SvImJ_P0026730 Nup37 protein_coding protein_coding MGP_129S1SvImJ_T0026731.1 MGP_129S1SvImJ_G0017623.1 mouse_genomes_project 10 89215089 89247732 + MGP_129S1SvImJ_P0026731 Nup37 protein_coding protein_coding MGP_129S1SvImJ_T0024940.1 MGP_129S1SvImJ_G0017142.1 mouse_genomes_project 10 32825833 32961121 + MGP_129S1SvImJ_P0024940 Frk protein_coding protein_coding MGP_129S1SvImJ_T0024941.1 MGP_129S1SvImJ_G0017142.1 mouse_genomes_project 10 32825833 32961121 + MGP_129S1SvImJ_P0024941 Frk protein_coding protein_coding MGP_129S1SvImJ_T0024938.1 MGP_129S1SvImJ_G0017141.1 mouse_genomes_project 10 32736312 32743417 + MGP_129S1SvImJ_P0024938 Col10a1 protein_coding protein_coding MGP_129S1SvImJ_T0024714.1 MGP_129S1SvImJ_G0017049.1 mouse_genomes_project 10 17574488 17578031 - MGP_129S1SvImJ_P0024714 Slc35d3 protein_coding protein_coding MGP_129S1SvImJ_T0024892.1 MGP_129S1SvImJ_G0017115.1 mouse_genomes_project 10 28401772 28406280 - MGP_129S1SvImJ_P0024892 Cenpw protein_coding protein_coding MGP_129S1SvImJ_T0025222.1 MGP_129S1SvImJ_G0017238.1 mouse_genomes_project 10 56850269 56882304 + MGP_129S1SvImJ_P0025222 Hsf2 protein_coding protein_coding MGP_129S1SvImJ_T0012416.1 MGP_129S1SvImJ_G0010505.1 mouse_genomes_project 10 24755717 24756729 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0026471.1 MGP_129S1SvImJ_G0017557.1 mouse_genomes_project 10 82098743 82102668 + MGP_129S1SvImJ_P0026471 Dohh protein_coding protein_coding MGP_129S1SvImJ_T0026472.1 MGP_129S1SvImJ_G0017557.1 mouse_genomes_project 10 82098774 82101767 + MGP_129S1SvImJ_P0026472 Dohh protein_coding protein_coding MGP_129S1SvImJ_T0026473.1 MGP_129S1SvImJ_G0017557.1 mouse_genomes_project 10 82098781 82105876 + MGP_129S1SvImJ_P0026473 Dohh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026474.1 MGP_129S1SvImJ_G0017557.1 mouse_genomes_project 10 82098782 82100417 + Dohh protein_coding retained_intron MGP_129S1SvImJ_T0026475.1 MGP_129S1SvImJ_G0017557.1 mouse_genomes_project 10 82099210 82100310 + MGP_129S1SvImJ_P0026475 Dohh protein_coding protein_coding MGP_129S1SvImJ_T0026476.1 MGP_129S1SvImJ_G0017557.1 mouse_genomes_project 10 82099936 82101997 + MGP_129S1SvImJ_P0026476 Dohh protein_coding protein_coding MGP_129S1SvImJ_T0026477.1 MGP_129S1SvImJ_G0017557.1 mouse_genomes_project 10 82101632 82105174 + MGP_129S1SvImJ_P0026477 Dohh protein_coding protein_coding MGP_129S1SvImJ_T0026478.1 MGP_129S1SvImJ_G0017557.1 mouse_genomes_project 10 82103320 82105583 + Dohh protein_coding processed_transcript MGP_129S1SvImJ_T0026479.1 MGP_129S1SvImJ_G0017557.1 mouse_genomes_project 10 82104644 82105451 + Dohh protein_coding retained_intron MGP_129S1SvImJ_T0012427.1 MGP_129S1SvImJ_G0010516.1 mouse_genomes_project 10 51257246 51257797 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003039.1 MGP_129S1SvImJ_G0002847.1 mouse_genomes_project 10 38069245 38071229 - Gm16364 antisense antisense MGP_129S1SvImJ_T0026270.1 MGP_129S1SvImJ_G0017500.1 mouse_genomes_project 10 80983172 80990351 - MGP_129S1SvImJ_P0026270 Mex3d protein_coding protein_coding MGP_129S1SvImJ_T0026271.1 MGP_129S1SvImJ_G0017500.1 mouse_genomes_project 10 80983174 80990351 - MGP_129S1SvImJ_P0026271 Mex3d protein_coding protein_coding MGP_129S1SvImJ_T0026272.1 MGP_129S1SvImJ_G0017500.1 mouse_genomes_project 10 80983271 80990066 - MGP_129S1SvImJ_P0026272 Mex3d protein_coding protein_coding MGP_129S1SvImJ_T0025801.1 MGP_129S1SvImJ_G0017371.1 mouse_genomes_project 10 76125125 76125897 - MGP_129S1SvImJ_P0025801 Mmp11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025802.1 MGP_129S1SvImJ_G0017371.1 mouse_genomes_project 10 76125125 76134379 - MGP_129S1SvImJ_P0025802 Mmp11 protein_coding protein_coding MGP_129S1SvImJ_T0025803.1 MGP_129S1SvImJ_G0017371.1 mouse_genomes_project 10 76125125 76134406 - MGP_129S1SvImJ_P0025803 Mmp11 protein_coding protein_coding MGP_129S1SvImJ_T0025804.1 MGP_129S1SvImJ_G0017371.1 mouse_genomes_project 10 76125126 76128316 - MGP_129S1SvImJ_P0025804 Mmp11 protein_coding protein_coding MGP_129S1SvImJ_T0025805.1 MGP_129S1SvImJ_G0017371.1 mouse_genomes_project 10 76128663 76129594 - Mmp11 protein_coding retained_intron MGP_129S1SvImJ_T0027437.1 MGP_129S1SvImJ_G0017845.1 mouse_genomes_project 10 131707608 131721938 + MGP_129S1SvImJ_P0027437 Naca protein_coding protein_coding MGP_129S1SvImJ_T0027438.1 MGP_129S1SvImJ_G0017845.1 mouse_genomes_project 10 131707608 131721938 + MGP_129S1SvImJ_P0027438 Naca protein_coding protein_coding MGP_129S1SvImJ_T0027439.1 MGP_129S1SvImJ_G0017845.1 mouse_genomes_project 10 131707862 131721933 + MGP_129S1SvImJ_P0027439 Naca protein_coding unknown_likely_coding MGP_129S1SvImJ_T0027294.1 MGP_129S1SvImJ_G0017799.1 mouse_genomes_project 10 130583192 130605310 - MGP_129S1SvImJ_P0027294 Tsfm protein_coding protein_coding MGP_129S1SvImJ_T0027295.1 MGP_129S1SvImJ_G0017799.1 mouse_genomes_project 10 130596838 130605347 - MGP_129S1SvImJ_P0027295 Tsfm protein_coding protein_coding MGP_129S1SvImJ_T0027296.1 MGP_129S1SvImJ_G0017799.1 mouse_genomes_project 10 130596954 130599604 - Tsfm protein_coding retained_intron MGP_129S1SvImJ_T0027297.1 MGP_129S1SvImJ_G0017799.1 mouse_genomes_project 10 130597132 130604898 - Tsfm protein_coding processed_transcript MGP_129S1SvImJ_T0027298.1 MGP_129S1SvImJ_G0017799.1 mouse_genomes_project 10 130597414 130605266 - Tsfm protein_coding retained_intron MGP_129S1SvImJ_T0027299.1 MGP_129S1SvImJ_G0017799.1 mouse_genomes_project 10 130598741 130605306 - MGP_129S1SvImJ_P0027299 Tsfm protein_coding protein_coding MGP_129S1SvImJ_T0027300.1 MGP_129S1SvImJ_G0017799.1 mouse_genomes_project 10 130603728 130605310 - Tsfm protein_coding retained_intron MGP_129S1SvImJ_T0024394.1 MGP_129S1SvImJ_G0016973.1 mouse_genomes_project 10 461758 476377 + MGP_129S1SvImJ_P0024394 Iyd protein_coding protein_coding MGP_129S1SvImJ_T0024395.1 MGP_129S1SvImJ_G0016973.1 mouse_genomes_project 10 461806 473582 + Iyd protein_coding retained_intron MGP_129S1SvImJ_T0000847.1 MGP_129S1SvImJ_G0000781.1 mouse_genomes_project 10 84904630 84905100 + TEC TEC MGP_129S1SvImJ_T0009616.1 MGP_129S1SvImJ_G0007732.1 mouse_genomes_project 10 81791839 81791899 - Mir5615-1 miRNA miRNA MGP_129S1SvImJ_T0025054.1 MGP_129S1SvImJ_G0017177.1 mouse_genomes_project 10 40181692 40195688 - protein_coding processed_transcript MGP_129S1SvImJ_T0025055.1 MGP_129S1SvImJ_G0017177.1 mouse_genomes_project 10 40181695 40253538 - MGP_129S1SvImJ_P0025055 protein_coding protein_coding MGP_129S1SvImJ_T0025056.1 MGP_129S1SvImJ_G0017177.1 mouse_genomes_project 10 40181695 40230460 - MGP_129S1SvImJ_P0025056 protein_coding protein_coding MGP_129S1SvImJ_T0025057.1 MGP_129S1SvImJ_G0017177.1 mouse_genomes_project 10 40182138 40371850 - MGP_129S1SvImJ_P0025057 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0025058.1 MGP_129S1SvImJ_G0017177.1 mouse_genomes_project 10 40182257 40222256 - MGP_129S1SvImJ_P0025058 protein_coding protein_coding MGP_129S1SvImJ_T0025059.1 MGP_129S1SvImJ_G0017177.1 mouse_genomes_project 10 40191766 40203524 - protein_coding retained_intron MGP_129S1SvImJ_T0025060.1 MGP_129S1SvImJ_G0017177.1 mouse_genomes_project 10 40193446 40371203 - MGP_129S1SvImJ_P0025060 protein_coding protein_coding MGP_129S1SvImJ_T0025061.1 MGP_129S1SvImJ_G0017177.1 mouse_genomes_project 10 40193565 40196256 - protein_coding retained_intron MGP_129S1SvImJ_T0025062.1 MGP_129S1SvImJ_G0017177.1 mouse_genomes_project 10 40223274 40230729 - protein_coding processed_transcript MGP_129S1SvImJ_T0027154.1 MGP_129S1SvImJ_G0017749.1 mouse_genomes_project 10 119768396 119786643 - MGP_129S1SvImJ_P0027154 Gm10271 protein_coding protein_coding MGP_129S1SvImJ_T0011310.1 MGP_129S1SvImJ_G0009426.1 mouse_genomes_project 10 133018025 133018330 - Gm25807 misc_RNA misc_RNA MGP_129S1SvImJ_T0011290.1 MGP_129S1SvImJ_G0009406.1 mouse_genomes_project 10 41207018 41207342 - Gm25277 misc_RNA misc_RNA MGP_129S1SvImJ_T0024563.1 MGP_129S1SvImJ_G0017009.1 mouse_genomes_project 10 7910823 7924706 - MGP_129S1SvImJ_P0024563 Rab32 protein_coding protein_coding MGP_129S1SvImJ_T0024802.1 MGP_129S1SvImJ_G0017083.1 mouse_genomes_project 10 21936161 21937238 + MGP_129S1SvImJ_P0024802 Taar7b protein_coding protein_coding MGP_129S1SvImJ_T0027323.1 MGP_129S1SvImJ_G0017808.1 mouse_genomes_project 10 130746535 130753747 + MGP_129S1SvImJ_P0027323 B4galnt1 protein_coding protein_coding MGP_129S1SvImJ_T0025738.1 MGP_129S1SvImJ_G0017355.1 mouse_genomes_project 10 75577382 75613827 + MGP_129S1SvImJ_P0025738 Upb1 protein_coding protein_coding MGP_129S1SvImJ_T0025739.1 MGP_129S1SvImJ_G0017355.1 mouse_genomes_project 10 75577429 75597245 + Upb1 protein_coding retained_intron MGP_129S1SvImJ_T0025740.1 MGP_129S1SvImJ_G0017355.1 mouse_genomes_project 10 75580514 75600077 + Upb1 protein_coding retained_intron MGP_129S1SvImJ_T0025742.1 MGP_129S1SvImJ_G0017355.1 mouse_genomes_project 10 75600480 75602619 + Upb1 protein_coding retained_intron MGP_129S1SvImJ_T0027613.1 MGP_129S1SvImJ_G0017925.1 mouse_genomes_project 10 133579619 133580546 - MGP_129S1SvImJ_P0027613 Olfr803 protein_coding protein_coding MGP_129S1SvImJ_T0027158.1 MGP_129S1SvImJ_G0017753.1 mouse_genomes_project 10 119895347 120005040 - MGP_129S1SvImJ_P0027158 Frs2 protein_coding protein_coding MGP_129S1SvImJ_T0024772.1 MGP_129S1SvImJ_G0017064.1 mouse_genomes_project 10 19863109 19868198 - MGP_129S1SvImJ_P0024772 protein_coding protein_coding MGP_129S1SvImJ_T0100436.1 MGP_129S1SvImJ_G0038503.1 mouse_genomes_project 10 59003393 59003525 - Gm23803 snoRNA snoRNA MGP_129S1SvImJ_T0025580.1 MGP_129S1SvImJ_G0017334.1 mouse_genomes_project 10 69191907 69208202 - MGP_129S1SvImJ_P0025580 Cdk1 protein_coding protein_coding MGP_129S1SvImJ_T0025581.1 MGP_129S1SvImJ_G0017334.1 mouse_genomes_project 10 69193596 69208167 - MGP_129S1SvImJ_P0025581 Cdk1 protein_coding protein_coding MGP_129S1SvImJ_T0025582.1 MGP_129S1SvImJ_G0017334.1 mouse_genomes_project 10 69195861 69197992 - Cdk1 protein_coding retained_intron MGP_129S1SvImJ_T0025583.1 MGP_129S1SvImJ_G0017334.1 mouse_genomes_project 10 69195992 69200773 - Cdk1 protein_coding retained_intron MGP_129S1SvImJ_T0025584.1 MGP_129S1SvImJ_G0017334.1 mouse_genomes_project 10 69196028 69206093 - MGP_129S1SvImJ_P0025584 Cdk1 protein_coding protein_coding MGP_129S1SvImJ_T0025585.1 MGP_129S1SvImJ_G0017334.1 mouse_genomes_project 10 69196066 69200697 - Cdk1 protein_coding retained_intron MGP_129S1SvImJ_T0025586.1 MGP_129S1SvImJ_G0017334.1 mouse_genomes_project 10 69200267 69208174 - Cdk1 protein_coding retained_intron MGP_129S1SvImJ_T0025388.1 MGP_129S1SvImJ_G0017285.1 mouse_genomes_project 10 61041960 61054720 + MGP_129S1SvImJ_P0025388 Sar1a protein_coding protein_coding MGP_129S1SvImJ_T0026126.1 MGP_129S1SvImJ_G0017471.1 mouse_genomes_project 10 80482158 80487461 + MGP_129S1SvImJ_P0026126 Kiss1r protein_coding protein_coding MGP_129S1SvImJ_T0026940.1 MGP_129S1SvImJ_G0017666.1 mouse_genomes_project 10 96299022 96461885 - MGP_129S1SvImJ_P0026940 Plxnc1 protein_coding protein_coding MGP_129S1SvImJ_T0026941.1 MGP_129S1SvImJ_G0017666.1 mouse_genomes_project 10 96345353 96351938 - Plxnc1 protein_coding retained_intron MGP_129S1SvImJ_T0026942.1 MGP_129S1SvImJ_G0017666.1 mouse_genomes_project 10 96362559 96379136 - MGP_129S1SvImJ_P0026942 Plxnc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026943.1 MGP_129S1SvImJ_G0017666.1 mouse_genomes_project 10 96378917 96437878 - Plxnc1 protein_coding retained_intron MGP_129S1SvImJ_T0024711.1 MGP_129S1SvImJ_G0017046.1 mouse_genomes_project 10 17347062 17360664 + MGP_129S1SvImJ_P0024711 Il22ra2 protein_coding protein_coding MGP_129S1SvImJ_T0026418.1 MGP_129S1SvImJ_G0017545.1 mouse_genomes_project 10 81956311 81970616 + MGP_129S1SvImJ_P0026418 Matk protein_coding protein_coding MGP_129S1SvImJ_T0026419.1 MGP_129S1SvImJ_G0017545.1 mouse_genomes_project 10 81964929 81970996 + MGP_129S1SvImJ_P0026419 Matk protein_coding protein_coding MGP_129S1SvImJ_T0026420.1 MGP_129S1SvImJ_G0017545.1 mouse_genomes_project 10 81964929 81970996 + MGP_129S1SvImJ_P0026420 Matk protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026421.1 MGP_129S1SvImJ_G0017545.1 mouse_genomes_project 10 81964929 81970612 + MGP_129S1SvImJ_P0026421 Matk protein_coding protein_coding MGP_129S1SvImJ_T0026422.1 MGP_129S1SvImJ_G0017545.1 mouse_genomes_project 10 81964935 81970612 + MGP_129S1SvImJ_P0026422 Matk protein_coding protein_coding MGP_129S1SvImJ_T0026423.1 MGP_129S1SvImJ_G0017545.1 mouse_genomes_project 10 81964972 81970616 + Matk protein_coding retained_intron MGP_129S1SvImJ_T0026424.1 MGP_129S1SvImJ_G0017545.1 mouse_genomes_project 10 81965078 81968157 + Matk protein_coding retained_intron MGP_129S1SvImJ_T0026425.1 MGP_129S1SvImJ_G0017545.1 mouse_genomes_project 10 81965460 81967284 + MGP_129S1SvImJ_P0026425 Matk protein_coding protein_coding MGP_129S1SvImJ_T0026426.1 MGP_129S1SvImJ_G0017545.1 mouse_genomes_project 10 81965548 81970606 + MGP_129S1SvImJ_P0026426 Matk protein_coding protein_coding MGP_129S1SvImJ_T0026427.1 MGP_129S1SvImJ_G0017545.1 mouse_genomes_project 10 81965845 81970544 + Matk protein_coding retained_intron MGP_129S1SvImJ_T0026428.1 MGP_129S1SvImJ_G0017545.1 mouse_genomes_project 10 81968800 81970298 + Matk protein_coding retained_intron MGP_129S1SvImJ_T0027483.1 MGP_129S1SvImJ_G0017855.1 mouse_genomes_project 10 131983342 131985497 + MGP_129S1SvImJ_P0027483 Apof protein_coding protein_coding MGP_129S1SvImJ_T0003054.1 MGP_129S1SvImJ_G0002858.1 mouse_genomes_project 10 61766868 61776469 + Hk1os antisense antisense MGP_129S1SvImJ_T0003055.1 MGP_129S1SvImJ_G0002858.1 mouse_genomes_project 10 61767219 61777144 + Hk1os antisense antisense MGP_129S1SvImJ_T0003056.1 MGP_129S1SvImJ_G0002858.1 mouse_genomes_project 10 61767234 61789999 + Hk1os antisense antisense MGP_129S1SvImJ_T0025875.1 MGP_129S1SvImJ_G0017393.1 mouse_genomes_project 10 77325526 77449226 - MGP_129S1SvImJ_P0025875 Col18a1 protein_coding protein_coding MGP_129S1SvImJ_T0025876.1 MGP_129S1SvImJ_G0017393.1 mouse_genomes_project 10 77325529 77391848 - MGP_129S1SvImJ_P0025876 Col18a1 protein_coding protein_coding MGP_129S1SvImJ_T0025877.1 MGP_129S1SvImJ_G0017393.1 mouse_genomes_project 10 77326364 77391877 - MGP_129S1SvImJ_P0025877 Col18a1 protein_coding protein_coding MGP_129S1SvImJ_T0025878.1 MGP_129S1SvImJ_G0017393.1 mouse_genomes_project 10 77355870 77364581 - MGP_129S1SvImJ_P0025878 Col18a1 protein_coding protein_coding MGP_129S1SvImJ_T0025879.1 MGP_129S1SvImJ_G0017393.1 mouse_genomes_project 10 77371461 77392118 - MGP_129S1SvImJ_P0025879 Col18a1 protein_coding protein_coding MGP_129S1SvImJ_T0003096.1 MGP_129S1SvImJ_G0002891.1 mouse_genomes_project 10 88878525 88880511 - Igf1os antisense antisense MGP_129S1SvImJ_T0003097.1 MGP_129S1SvImJ_G0002891.1 mouse_genomes_project 10 88878537 88915430 - Igf1os antisense antisense MGP_129S1SvImJ_T0025136.1 MGP_129S1SvImJ_G0017199.1 mouse_genomes_project 10 42738841 42814290 - MGP_129S1SvImJ_P0025136 Aim1 protein_coding protein_coding MGP_129S1SvImJ_T0025137.1 MGP_129S1SvImJ_G0017199.1 mouse_genomes_project 10 42738845 42970348 - MGP_129S1SvImJ_P0025137 Aim1 protein_coding protein_coding MGP_129S1SvImJ_T0100455.1 MGP_129S1SvImJ_G0038522.1 mouse_genomes_project 10 109302038 109302123 + Gm24745 snoRNA snoRNA MGP_129S1SvImJ_T0026334.1 MGP_129S1SvImJ_G0017518.1 mouse_genomes_project 10 81449097 81451621 - MGP_129S1SvImJ_P0026334 Plekhj1 protein_coding protein_coding MGP_129S1SvImJ_T0026313.1 MGP_129S1SvImJ_G0017511.1 mouse_genomes_project 10 81256651 81274650 + MGP_129S1SvImJ_P0026313 Csnk1g2 protein_coding protein_coding MGP_129S1SvImJ_T0026314.1 MGP_129S1SvImJ_G0017511.1 mouse_genomes_project 10 81263532 81274650 + MGP_129S1SvImJ_P0026314 Csnk1g2 protein_coding protein_coding MGP_129S1SvImJ_T0009609.1 MGP_129S1SvImJ_G0007725.1 mouse_genomes_project 10 78899632 78899695 - Mir6908 miRNA miRNA MGP_129S1SvImJ_T0012462.1 MGP_129S1SvImJ_G0010551.1 mouse_genomes_project 10 130903454 130904454 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024713.1 MGP_129S1SvImJ_G0017048.1 mouse_genomes_project 10 17441893 17489855 + MGP_129S1SvImJ_P0024713 Il20ra protein_coding protein_coding MGP_129S1SvImJ_T0027337.1 MGP_129S1SvImJ_G0017814.1 mouse_genomes_project 10 130853819 130872414 + MGP_129S1SvImJ_P0027337 Dctn2 protein_coding protein_coding MGP_129S1SvImJ_T0024450.1 MGP_129S1SvImJ_G0016988.1 mouse_genomes_project 10 2917854 3028009 - MGP_129S1SvImJ_P0024450 Rgs17 protein_coding protein_coding MGP_129S1SvImJ_T0024451.1 MGP_129S1SvImJ_G0016988.1 mouse_genomes_project 10 2917854 3027995 - MGP_129S1SvImJ_P0024451 Rgs17 protein_coding protein_coding MGP_129S1SvImJ_T0024452.1 MGP_129S1SvImJ_G0016988.1 mouse_genomes_project 10 2924371 3027975 - MGP_129S1SvImJ_P0024452 Rgs17 protein_coding protein_coding MGP_129S1SvImJ_T0024453.1 MGP_129S1SvImJ_G0016988.1 mouse_genomes_project 10 2925301 3027975 - MGP_129S1SvImJ_P0024453 Rgs17 protein_coding protein_coding MGP_129S1SvImJ_T0027534.1 MGP_129S1SvImJ_G0017876.1 mouse_genomes_project 10 132434968 132439000 - MGP_129S1SvImJ_P0027534 Suox protein_coding protein_coding MGP_129S1SvImJ_T0006186.1 MGP_129S1SvImJ_G0005166.1 mouse_genomes_project 10 132773457 132781229 + 9030616G12Rik lincRNA lincRNA MGP_129S1SvImJ_T0025530.1 MGP_129S1SvImJ_G0017321.1 mouse_genomes_project 10 66726096 66832762 - MGP_129S1SvImJ_P0025530 Reep3 protein_coding protein_coding MGP_129S1SvImJ_T0012460.1 MGP_129S1SvImJ_G0010549.1 mouse_genomes_project 10 124138177 124138964 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0027251.1 MGP_129S1SvImJ_G0017785.1 mouse_genomes_project 10 124929442 124970473 + MGP_129S1SvImJ_P0027251 D930020B18Rik protein_coding protein_coding MGP_129S1SvImJ_T0027252.1 MGP_129S1SvImJ_G0017785.1 mouse_genomes_project 10 124929555 124988572 + MGP_129S1SvImJ_P0027252 D930020B18Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027253.1 MGP_129S1SvImJ_G0017785.1 mouse_genomes_project 10 124929648 124988301 + MGP_129S1SvImJ_P0027253 D930020B18Rik protein_coding protein_coding MGP_129S1SvImJ_T0027254.1 MGP_129S1SvImJ_G0017785.1 mouse_genomes_project 10 124929726 124988301 + MGP_129S1SvImJ_P0027254 D930020B18Rik protein_coding protein_coding MGP_129S1SvImJ_T0027187.1 MGP_129S1SvImJ_G0017763.1 mouse_genomes_project 10 120708970 120755501 - MGP_129S1SvImJ_P0027187 Nup107 protein_coding protein_coding MGP_129S1SvImJ_T0027188.1 MGP_129S1SvImJ_G0017763.1 mouse_genomes_project 10 120708989 120755508 - MGP_129S1SvImJ_P0027188 Nup107 protein_coding protein_coding MGP_129S1SvImJ_T0024586.1 MGP_129S1SvImJ_G0017016.1 mouse_genomes_project 10 10327800 10354856 - MGP_129S1SvImJ_P0024586 Stx11 protein_coding protein_coding MGP_129S1SvImJ_T0024587.1 MGP_129S1SvImJ_G0017016.1 mouse_genomes_project 10 10327800 10354856 - MGP_129S1SvImJ_P0024587 Stx11 protein_coding protein_coding MGP_129S1SvImJ_T0006088.1 MGP_129S1SvImJ_G0005099.1 mouse_genomes_project 10 7329258 7493997 + Gm28905 lincRNA lincRNA MGP_129S1SvImJ_T0024933.1 MGP_129S1SvImJ_G0017139.1 mouse_genomes_project 10 32628428 32656556 - Nt5dc1 protein_coding processed_transcript MGP_129S1SvImJ_T0024935.1 MGP_129S1SvImJ_G0017139.1 mouse_genomes_project 10 32645202 32764483 - MGP_129S1SvImJ_P0024935 Nt5dc1 protein_coding protein_coding MGP_129S1SvImJ_T0024936.1 MGP_129S1SvImJ_G0017139.1 mouse_genomes_project 10 32645202 32764470 - MGP_129S1SvImJ_P0024936 Nt5dc1 protein_coding protein_coding MGP_129S1SvImJ_T0024937.1 MGP_129S1SvImJ_G0017139.1 mouse_genomes_project 10 32645858 32764459 - Nt5dc1 protein_coding processed_transcript MGP_129S1SvImJ_T0024939.1 MGP_129S1SvImJ_G0017139.1 mouse_genomes_project 10 32743399 32764412 - MGP_129S1SvImJ_P0024939 Nt5dc1 protein_coding protein_coding MGP_129S1SvImJ_T0025821.1 MGP_129S1SvImJ_G0017379.1 mouse_genomes_project 10 76482077 76489384 + MGP_129S1SvImJ_P0025821 S100b protein_coding protein_coding MGP_129S1SvImJ_T0027558.1 MGP_129S1SvImJ_G0017890.1 mouse_genomes_project 10 132718871 132724514 - MGP_129S1SvImJ_P0027558 Bloc1s1 protein_coding protein_coding MGP_129S1SvImJ_T0027561.1 MGP_129S1SvImJ_G0017890.1 mouse_genomes_project 10 132720903 132724514 - MGP_129S1SvImJ_P0027561 Bloc1s1 protein_coding protein_coding MGP_129S1SvImJ_T0027562.1 MGP_129S1SvImJ_G0017890.1 mouse_genomes_project 10 132720936 132725025 - MGP_129S1SvImJ_P0027562 Bloc1s1 protein_coding protein_coding MGP_129S1SvImJ_T0027563.1 MGP_129S1SvImJ_G0017890.1 mouse_genomes_project 10 132721032 132724016 - Bloc1s1 protein_coding processed_transcript MGP_129S1SvImJ_T0027564.1 MGP_129S1SvImJ_G0017890.1 mouse_genomes_project 10 132723505 132724514 - Bloc1s1 protein_coding retained_intron MGP_129S1SvImJ_T0003052.1 MGP_129S1SvImJ_G0002856.1 mouse_genomes_project 10 58983468 58984446 - Gm17059 antisense antisense MGP_129S1SvImJ_T0006115.1 MGP_129S1SvImJ_G0005121.1 mouse_genomes_project 10 60338286 60344858 - Gm20610 lincRNA lincRNA MGP_129S1SvImJ_T0027186.1 MGP_129S1SvImJ_G0017762.1 mouse_genomes_project 10 120691010 120702828 - MGP_129S1SvImJ_P0027186 Slc35e3 protein_coding protein_coding MGP_129S1SvImJ_T0026042.1 MGP_129S1SvImJ_G0017447.1 mouse_genomes_project 10 80141257 80150515 - MGP_129S1SvImJ_P0026042 C2cd4c protein_coding protein_coding MGP_129S1SvImJ_T0026043.1 MGP_129S1SvImJ_G0017447.1 mouse_genomes_project 10 80141257 80150508 - MGP_129S1SvImJ_P0026043 C2cd4c protein_coding protein_coding MGP_129S1SvImJ_T0027427.1 MGP_129S1SvImJ_G0017842.1 mouse_genomes_project 10 131551436 131564871 + MGP_129S1SvImJ_P0027427 Sdr9c7 protein_coding protein_coding MGP_129S1SvImJ_T0027428.1 MGP_129S1SvImJ_G0017842.1 mouse_genomes_project 10 131551693 131564860 + Sdr9c7 protein_coding processed_transcript MGP_129S1SvImJ_T0027429.1 MGP_129S1SvImJ_G0017842.1 mouse_genomes_project 10 131554969 131563496 + Sdr9c7 protein_coding processed_transcript MGP_129S1SvImJ_T0027430.1 MGP_129S1SvImJ_G0017842.1 mouse_genomes_project 10 131556321 131563447 + Sdr9c7 protein_coding processed_transcript MGP_129S1SvImJ_T0099156.1 MGP_129S1SvImJ_G0037223.1 mouse_genomes_project 10 7442953 7443117 + Gm25682 snRNA snRNA MGP_129S1SvImJ_T0012424.1 MGP_129S1SvImJ_G0010513.1 mouse_genomes_project 10 42138961 42139394 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0025477.1 MGP_129S1SvImJ_G0017307.1 mouse_genomes_project 10 62402289 62430960 + MGP_129S1SvImJ_P0025477 Slc25a16 protein_coding protein_coding MGP_129S1SvImJ_T0025478.1 MGP_129S1SvImJ_G0017307.1 mouse_genomes_project 10 62402323 62414396 + Slc25a16 protein_coding retained_intron MGP_129S1SvImJ_T0025479.1 MGP_129S1SvImJ_G0017307.1 mouse_genomes_project 10 62402336 62428891 + MGP_129S1SvImJ_P0025479 Slc25a16 protein_coding protein_coding MGP_129S1SvImJ_T0025480.1 MGP_129S1SvImJ_G0017307.1 mouse_genomes_project 10 62426903 62428896 + Slc25a16 protein_coding retained_intron MGP_129S1SvImJ_T0026740.1 MGP_129S1SvImJ_G0017625.1 mouse_genomes_project 10 89399924 89437229 - MGP_129S1SvImJ_P0026740 Dram1 protein_coding protein_coding MGP_129S1SvImJ_T0026741.1 MGP_129S1SvImJ_G0017625.1 mouse_genomes_project 10 89399924 89437150 - MGP_129S1SvImJ_P0026741 Dram1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026742.1 MGP_129S1SvImJ_G0017625.1 mouse_genomes_project 10 89418351 89463235 - MGP_129S1SvImJ_P0026742 Dram1 protein_coding protein_coding MGP_129S1SvImJ_T0012447.1 MGP_129S1SvImJ_G0010536.1 mouse_genomes_project 10 81628086 81628343 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009615.1 MGP_129S1SvImJ_G0007731.1 mouse_genomes_project 10 81241083 81241153 + Mir6912 miRNA miRNA MGP_129S1SvImJ_T0026693.1 MGP_129S1SvImJ_G0017612.1 mouse_genomes_project 10 87668287 87681745 - Hsp90b1 protein_coding retained_intron MGP_129S1SvImJ_T0026694.1 MGP_129S1SvImJ_G0017612.1 mouse_genomes_project 10 87668918 87685297 - MGP_129S1SvImJ_P0026694 Hsp90b1 protein_coding protein_coding MGP_129S1SvImJ_T0026695.1 MGP_129S1SvImJ_G0017612.1 mouse_genomes_project 10 87670479 87678215 - MGP_129S1SvImJ_P0026695 Hsp90b1 protein_coding protein_coding MGP_129S1SvImJ_T0026696.1 MGP_129S1SvImJ_G0017612.1 mouse_genomes_project 10 87672099 87673800 - Hsp90b1 protein_coding retained_intron MGP_129S1SvImJ_T0026697.1 MGP_129S1SvImJ_G0017612.1 mouse_genomes_project 10 87681722 87682881 - Hsp90b1 protein_coding retained_intron MGP_129S1SvImJ_T0025286.1 MGP_129S1SvImJ_G0017260.1 mouse_genomes_project 10 58884967 59044933 + MGP_129S1SvImJ_P0025286 Micu1 protein_coding protein_coding MGP_129S1SvImJ_T0025287.1 MGP_129S1SvImJ_G0017260.1 mouse_genomes_project 10 58885053 58929197 + Micu1 protein_coding retained_intron MGP_129S1SvImJ_T0025288.1 MGP_129S1SvImJ_G0017260.1 mouse_genomes_project 10 58885089 59044931 + MGP_129S1SvImJ_P0025288 Micu1 protein_coding protein_coding MGP_129S1SvImJ_T0025289.1 MGP_129S1SvImJ_G0017260.1 mouse_genomes_project 10 58885108 59044931 + MGP_129S1SvImJ_P0025289 Micu1 protein_coding protein_coding MGP_129S1SvImJ_T0025290.1 MGP_129S1SvImJ_G0017260.1 mouse_genomes_project 10 58885118 59044924 + MGP_129S1SvImJ_P0025290 Micu1 protein_coding protein_coding MGP_129S1SvImJ_T0025291.1 MGP_129S1SvImJ_G0017260.1 mouse_genomes_project 10 58885139 58973208 + MGP_129S1SvImJ_P0025291 Micu1 protein_coding protein_coding MGP_129S1SvImJ_T0025292.1 MGP_129S1SvImJ_G0017260.1 mouse_genomes_project 10 58885148 58936006 + Micu1 protein_coding retained_intron MGP_129S1SvImJ_T0025293.1 MGP_129S1SvImJ_G0017260.1 mouse_genomes_project 10 58924384 58925059 + Micu1 protein_coding processed_transcript MGP_129S1SvImJ_T0025294.1 MGP_129S1SvImJ_G0017260.1 mouse_genomes_project 10 58925074 58941475 + MGP_129S1SvImJ_P0025294 Micu1 protein_coding protein_coding MGP_129S1SvImJ_T0025295.1 MGP_129S1SvImJ_G0017260.1 mouse_genomes_project 10 58946713 58973306 + Micu1 protein_coding processed_transcript MGP_129S1SvImJ_T0025296.1 MGP_129S1SvImJ_G0017260.1 mouse_genomes_project 10 59012943 59027024 + Micu1 protein_coding retained_intron MGP_129S1SvImJ_T0025297.1 MGP_129S1SvImJ_G0017260.1 mouse_genomes_project 10 59041972 59044204 + Micu1 protein_coding retained_intron MGP_129S1SvImJ_T0027132.1 MGP_129S1SvImJ_G0017745.1 mouse_genomes_project 10 119191260 119252694 - MGP_129S1SvImJ_P0027132 Kcnmb4 protein_coding protein_coding MGP_129S1SvImJ_T0027133.1 MGP_129S1SvImJ_G0017745.1 mouse_genomes_project 10 119210796 119251175 - MGP_129S1SvImJ_P0027133 Kcnmb4 protein_coding protein_coding MGP_129S1SvImJ_T0027134.1 MGP_129S1SvImJ_G0017745.1 mouse_genomes_project 10 119237882 119251162 - MGP_129S1SvImJ_P0027134 Kcnmb4 protein_coding protein_coding MGP_129S1SvImJ_T0009608.1 MGP_129S1SvImJ_G0007724.1 mouse_genomes_project 10 78889432 78889536 + Mir6410 miRNA miRNA MGP_129S1SvImJ_T0003110.1 MGP_129S1SvImJ_G0002900.1 mouse_genomes_project 10 119250902 119253798 + Kcnmb4os2 antisense antisense MGP_129S1SvImJ_T0003111.1 MGP_129S1SvImJ_G0002900.1 mouse_genomes_project 10 119252843 119254135 + Kcnmb4os2 antisense antisense MGP_129S1SvImJ_T0003112.1 MGP_129S1SvImJ_G0002900.1 mouse_genomes_project 10 119253160 119253803 + Kcnmb4os2 antisense antisense MGP_129S1SvImJ_T0025922.1 MGP_129S1SvImJ_G0017402.1 mouse_genomes_project 10 78033529 78034629 - MGP_129S1SvImJ_P0025922 Gm19402 protein_coding protein_coding MGP_129S1SvImJ_T0024583.1 MGP_129S1SvImJ_G0017015.1 mouse_genomes_project 10 9743963 9912848 - MGP_129S1SvImJ_P0024583 Utrn protein_coding unknown_likely_coding MGP_129S1SvImJ_T0024584.1 MGP_129S1SvImJ_G0017015.1 mouse_genomes_project 10 9743965 10245702 - MGP_129S1SvImJ_P0024584 Utrn protein_coding protein_coding MGP_129S1SvImJ_T0024585.1 MGP_129S1SvImJ_G0017015.1 mouse_genomes_project 10 9989990 10253298 - MGP_129S1SvImJ_P0024585 Utrn protein_coding unknown_likely_coding MGP_129S1SvImJ_T0024902.1 MGP_129S1SvImJ_G0017121.1 mouse_genomes_project 10 29548354 29563161 + MGP_129S1SvImJ_P0024902 Hddc2 protein_coding protein_coding MGP_129S1SvImJ_T0024903.1 MGP_129S1SvImJ_G0017121.1 mouse_genomes_project 10 29548377 29552005 + Hddc2 protein_coding retained_intron MGP_129S1SvImJ_T0024904.1 MGP_129S1SvImJ_G0017121.1 mouse_genomes_project 10 29548379 29552816 + Hddc2 protein_coding retained_intron MGP_129S1SvImJ_T0024905.1 MGP_129S1SvImJ_G0017121.1 mouse_genomes_project 10 29548444 29563141 + MGP_129S1SvImJ_P0024905 Hddc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024906.1 MGP_129S1SvImJ_G0017121.1 mouse_genomes_project 10 29555126 29563159 + Hddc2 protein_coding retained_intron MGP_129S1SvImJ_T0009640.1 MGP_129S1SvImJ_G0007756.1 mouse_genomes_project 10 123610121 123610241 - Mir763 miRNA miRNA MGP_129S1SvImJ_T0024880.1 MGP_129S1SvImJ_G0017110.1 mouse_genomes_project 10 27316994 27373012 + MGP_129S1SvImJ_P0024880 Soga3 protein_coding protein_coding MGP_129S1SvImJ_T0025923.1 MGP_129S1SvImJ_G0017403.1 mouse_genomes_project 10 78051750 78052083 + MGP_129S1SvImJ_P0025923 Gm10272 protein_coding protein_coding MGP_129S1SvImJ_T0009621.1 MGP_129S1SvImJ_G0007737.1 mouse_genomes_project 10 82230445 82230542 + Gm25595 miRNA miRNA MGP_129S1SvImJ_T0003066.1 MGP_129S1SvImJ_G0002867.1 mouse_genomes_project 10 76201087 76202389 - Gm16220 antisense antisense MGP_129S1SvImJ_T0006096.1 MGP_129S1SvImJ_G0005105.1 mouse_genomes_project 10 19222130 19230601 + 1700021A07Rik lincRNA lincRNA MGP_129S1SvImJ_T0006097.1 MGP_129S1SvImJ_G0005105.1 mouse_genomes_project 10 19222218 19229780 + 1700021A07Rik lincRNA lincRNA MGP_129S1SvImJ_T0006098.1 MGP_129S1SvImJ_G0005105.1 mouse_genomes_project 10 19229375 19229684 + 1700021A07Rik lincRNA lincRNA MGP_129S1SvImJ_T0012451.1 MGP_129S1SvImJ_G0010540.1 mouse_genomes_project 10 98055378 98055567 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099190.1 MGP_129S1SvImJ_G0037257.1 mouse_genomes_project 10 80558552 80558659 + Gm26243 snRNA snRNA MGP_129S1SvImJ_T0012410.1 MGP_129S1SvImJ_G0010499.1 mouse_genomes_project 10 19998674 19999614 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024960.1 MGP_129S1SvImJ_G0017148.1 mouse_genomes_project 10 37609670 37623535 - MGP_129S1SvImJ_P0024960 Fam229b protein_coding protein_coding MGP_129S1SvImJ_T0024961.1 MGP_129S1SvImJ_G0017148.1 mouse_genomes_project 10 37609674 37623529 - MGP_129S1SvImJ_P0024961 Fam229b protein_coding protein_coding MGP_129S1SvImJ_T0024962.1 MGP_129S1SvImJ_G0017148.1 mouse_genomes_project 10 37609676 37613955 - MGP_129S1SvImJ_P0024962 Fam229b protein_coding protein_coding MGP_129S1SvImJ_T0024963.1 MGP_129S1SvImJ_G0017148.1 mouse_genomes_project 10 37609676 37623477 - MGP_129S1SvImJ_P0024963 Fam229b protein_coding protein_coding MGP_129S1SvImJ_T0024964.1 MGP_129S1SvImJ_G0017148.1 mouse_genomes_project 10 37609684 37623529 - MGP_129S1SvImJ_P0024964 Fam229b protein_coding protein_coding MGP_129S1SvImJ_T0024965.1 MGP_129S1SvImJ_G0017148.1 mouse_genomes_project 10 37609685 37623529 - MGP_129S1SvImJ_P0024965 Fam229b protein_coding protein_coding MGP_129S1SvImJ_T0024966.1 MGP_129S1SvImJ_G0017148.1 mouse_genomes_project 10 37609686 37613167 - MGP_129S1SvImJ_P0024966 Fam229b protein_coding protein_coding MGP_129S1SvImJ_T0024967.1 MGP_129S1SvImJ_G0017148.1 mouse_genomes_project 10 37609690 37623543 - MGP_129S1SvImJ_P0024967 Fam229b protein_coding protein_coding MGP_129S1SvImJ_T0024968.1 MGP_129S1SvImJ_G0017148.1 mouse_genomes_project 10 37609734 37623529 - MGP_129S1SvImJ_P0024968 Fam229b protein_coding protein_coding MGP_129S1SvImJ_T0024969.1 MGP_129S1SvImJ_G0017148.1 mouse_genomes_project 10 37610485 37623486 - Fam229b protein_coding retained_intron MGP_129S1SvImJ_T0027106.1 MGP_129S1SvImJ_G0017737.1 mouse_genomes_project 10 118073416 118089012 - MGP_129S1SvImJ_P0027106 Thap2 protein_coding protein_coding MGP_129S1SvImJ_T0003084.1 MGP_129S1SvImJ_G0002881.1 mouse_genomes_project 10 82182338 82184152 + Gm16105 antisense antisense MGP_129S1SvImJ_T0024696.1 MGP_129S1SvImJ_G0017041.1 mouse_genomes_project 10 16471412 16476528 - MGP_129S1SvImJ_P0024696 Gm4922 protein_coding protein_coding MGP_129S1SvImJ_T0027263.1 MGP_129S1SvImJ_G0017788.1 mouse_genomes_project 10 125399957 125425178 - MGP_129S1SvImJ_P0027263 Tmem5 protein_coding protein_coding MGP_129S1SvImJ_T0027264.1 MGP_129S1SvImJ_G0017788.1 mouse_genomes_project 10 125403025 125424963 - MGP_129S1SvImJ_P0027264 Tmem5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027265.1 MGP_129S1SvImJ_G0017788.1 mouse_genomes_project 10 125403447 125417194 - Tmem5 protein_coding retained_intron MGP_129S1SvImJ_T0027266.1 MGP_129S1SvImJ_G0017788.1 mouse_genomes_project 10 125416449 125418510 - Tmem5 protein_coding retained_intron MGP_129S1SvImJ_T0027267.1 MGP_129S1SvImJ_G0017788.1 mouse_genomes_project 10 125416826 125423941 - Tmem5 protein_coding retained_intron MGP_129S1SvImJ_T0027268.1 MGP_129S1SvImJ_G0017788.1 mouse_genomes_project 10 125423860 125424933 - Tmem5 protein_coding processed_transcript MGP_129S1SvImJ_T0025271.1 MGP_129S1SvImJ_G0017253.1 mouse_genomes_project 10 58306597 58365858 - MGP_129S1SvImJ_P0025271 Sept10 protein_coding protein_coding MGP_129S1SvImJ_T0027235.1 MGP_129S1SvImJ_G0017775.1 mouse_genomes_project 10 123633018 123639023 - protein_coding retained_intron MGP_129S1SvImJ_T0027629.1 MGP_129S1SvImJ_G0017937.1 mouse_genomes_project 10 133794810 133795743 - MGP_129S1SvImJ_P0027629 protein_coding protein_coding MGP_129S1SvImJ_T0025344.1 MGP_129S1SvImJ_G0017270.1 mouse_genomes_project 10 59626027 59629850 + MGP_129S1SvImJ_P0025344 Gm17455 protein_coding protein_coding MGP_129S1SvImJ_T0100438.1 MGP_129S1SvImJ_G0038505.1 mouse_genomes_project 10 62405052 62405181 - Gm25862 snoRNA snoRNA MGP_129S1SvImJ_T0098801.1 MGP_129S1SvImJ_G0036885.1 mouse_genomes_project 10 73581962 73612103 + Gm15397 sense_intronic sense_intronic MGP_129S1SvImJ_T0024614.1 MGP_129S1SvImJ_G0017019.1 mouse_genomes_project 10 10546354 10575373 - MGP_129S1SvImJ_P0024614 Zc2hc1b protein_coding protein_coding MGP_129S1SvImJ_T0027164.1 MGP_129S1SvImJ_G0017758.1 mouse_genomes_project 10 120182174 120188244 - MGP_129S1SvImJ_P0027164 Lyz1 protein_coding protein_coding MGP_129S1SvImJ_T0026669.1 MGP_129S1SvImJ_G0017604.1 mouse_genomes_project 10 86865838 86867843 + MGP_129S1SvImJ_P0026669 Ascl4 protein_coding protein_coding MGP_129S1SvImJ_T0026670.1 MGP_129S1SvImJ_G0017604.1 mouse_genomes_project 10 86866931 86889403 + MGP_129S1SvImJ_P0026670 Ascl4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0009627.1 MGP_129S1SvImJ_G0007743.1 mouse_genomes_project 10 93952624 93952718 + Gm22582 miRNA miRNA MGP_129S1SvImJ_T0098440.1 MGP_129S1SvImJ_G0036525.1 mouse_genomes_project 10 78975298 78975414 + Gm25164 rRNA rRNA MGP_129S1SvImJ_T0027123.1 MGP_129S1SvImJ_G0017742.1 mouse_genomes_project 10 118766907 119034520 + MGP_129S1SvImJ_P0027123 Ptprr protein_coding protein_coding MGP_129S1SvImJ_T0027124.1 MGP_129S1SvImJ_G0017742.1 mouse_genomes_project 10 118766981 118868325 + Ptprr protein_coding processed_transcript MGP_129S1SvImJ_T0027126.1 MGP_129S1SvImJ_G0017742.1 mouse_genomes_project 10 118900041 119034518 + MGP_129S1SvImJ_P0027126 Ptprr protein_coding protein_coding MGP_129S1SvImJ_T0027127.1 MGP_129S1SvImJ_G0017742.1 mouse_genomes_project 10 118926442 119034520 + MGP_129S1SvImJ_P0027127 Ptprr protein_coding protein_coding MGP_129S1SvImJ_T0027128.1 MGP_129S1SvImJ_G0017742.1 mouse_genomes_project 10 118926535 119034520 + MGP_129S1SvImJ_P0027128 Ptprr protein_coding protein_coding MGP_129S1SvImJ_T0027129.1 MGP_129S1SvImJ_G0017742.1 mouse_genomes_project 10 118926595 119033933 + MGP_129S1SvImJ_P0027129 Ptprr protein_coding protein_coding MGP_129S1SvImJ_T0027130.1 MGP_129S1SvImJ_G0017742.1 mouse_genomes_project 10 118945547 118992945 + Ptprr protein_coding processed_transcript MGP_129S1SvImJ_T0006168.1 MGP_129S1SvImJ_G0005152.1 mouse_genomes_project 10 105064160 105065023 - Gm17028 lincRNA lincRNA MGP_129S1SvImJ_T0025117.1 MGP_129S1SvImJ_G0017191.1 mouse_genomes_project 10 41922155 41923994 + MGP_129S1SvImJ_P0025117 9030612E09Rik protein_coding protein_coding MGP_129S1SvImJ_T0009613.1 MGP_129S1SvImJ_G0007729.1 mouse_genomes_project 10 80876176 80876245 + Mir6911 miRNA miRNA MGP_129S1SvImJ_T0024994.1 MGP_129S1SvImJ_G0017154.1 mouse_genomes_project 10 38418515 38430263 - MGP_129S1SvImJ_P0024994 Mfsd4b4 protein_coding protein_coding MGP_129S1SvImJ_T0024995.1 MGP_129S1SvImJ_G0017154.1 mouse_genomes_project 10 38418515 38426846 - MGP_129S1SvImJ_P0024995 Mfsd4b4 protein_coding protein_coding MGP_129S1SvImJ_T0025130.1 MGP_129S1SvImJ_G0017196.1 mouse_genomes_project 10 42377468 42416577 + MGP_129S1SvImJ_P0025130 F930017D23Rik protein_coding protein_coding MGP_129S1SvImJ_T0003053.1 MGP_129S1SvImJ_G0002857.1 mouse_genomes_project 10 60215054 60225176 + Gm26947 antisense antisense MGP_129S1SvImJ_T0025458.1 MGP_129S1SvImJ_G0017301.1 mouse_genomes_project 10 61971024 62019442 - MGP_129S1SvImJ_P0025458 Kif1bp protein_coding protein_coding MGP_129S1SvImJ_T0025459.1 MGP_129S1SvImJ_G0017301.1 mouse_genomes_project 10 61972053 62008832 - MGP_129S1SvImJ_P0025459 Kif1bp protein_coding protein_coding MGP_129S1SvImJ_T0025460.1 MGP_129S1SvImJ_G0017301.1 mouse_genomes_project 10 61997089 62019379 - MGP_129S1SvImJ_P0025460 Kif1bp protein_coding protein_coding MGP_129S1SvImJ_T0025461.1 MGP_129S1SvImJ_G0017301.1 mouse_genomes_project 10 61997163 62004742 - MGP_129S1SvImJ_P0025461 Kif1bp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025462.1 MGP_129S1SvImJ_G0017301.1 mouse_genomes_project 10 61998219 62002199 - Kif1bp protein_coding retained_intron MGP_129S1SvImJ_T0025463.1 MGP_129S1SvImJ_G0017301.1 mouse_genomes_project 10 62004491 62008820 - Kif1bp protein_coding retained_intron MGP_129S1SvImJ_T0025464.1 MGP_129S1SvImJ_G0017301.1 mouse_genomes_project 10 62008466 62019396 - Kif1bp protein_coding retained_intron MGP_129S1SvImJ_T0027640.1 MGP_129S1SvImJ_G0017946.1 mouse_genomes_project 10 134072204 134073130 - MGP_129S1SvImJ_P0027640 protein_coding protein_coding MGP_129S1SvImJ_T0009637.1 MGP_129S1SvImJ_G0007753.1 mouse_genomes_project 10 110678233 110678327 + Gm25591 miRNA miRNA MGP_129S1SvImJ_T0025398.1 MGP_129S1SvImJ_G0017289.1 mouse_genomes_project 10 61215096 61255248 - Col13a1 protein_coding processed_transcript MGP_129S1SvImJ_T0025399.1 MGP_129S1SvImJ_G0017289.1 mouse_genomes_project 10 61215096 61243269 - MGP_129S1SvImJ_P0025399 Col13a1 protein_coding protein_coding MGP_129S1SvImJ_T0025400.1 MGP_129S1SvImJ_G0017289.1 mouse_genomes_project 10 61215096 61360548 - MGP_129S1SvImJ_P0025400 Col13a1 protein_coding protein_coding MGP_129S1SvImJ_T0025401.1 MGP_129S1SvImJ_G0017289.1 mouse_genomes_project 10 61215096 61360513 - MGP_129S1SvImJ_P0025401 Col13a1 protein_coding protein_coding MGP_129S1SvImJ_T0025402.1 MGP_129S1SvImJ_G0017289.1 mouse_genomes_project 10 61215096 61360513 - MGP_129S1SvImJ_P0025402 Col13a1 protein_coding protein_coding MGP_129S1SvImJ_T0025403.1 MGP_129S1SvImJ_G0017289.1 mouse_genomes_project 10 61225587 61359561 - Col13a1 protein_coding retained_intron MGP_129S1SvImJ_T0025404.1 MGP_129S1SvImJ_G0017289.1 mouse_genomes_project 10 61225716 61228381 - Col13a1 protein_coding retained_intron MGP_129S1SvImJ_T0025979.1 MGP_129S1SvImJ_G0017418.1 mouse_genomes_project 10 78605820 78620068 - MGP_129S1SvImJ_P0025979 Pwp2 protein_coding protein_coding MGP_129S1SvImJ_T0024760.1 MGP_129S1SvImJ_G0017063.1 mouse_genomes_project 10 19702346 19823199 + MGP_129S1SvImJ_P0024760 Sgk1 protein_coding protein_coding MGP_129S1SvImJ_T0024761.1 MGP_129S1SvImJ_G0017063.1 mouse_genomes_project 10 19702531 19719278 + Sgk1 protein_coding processed_transcript MGP_129S1SvImJ_T0024762.1 MGP_129S1SvImJ_G0017063.1 mouse_genomes_project 10 19751211 19813709 + MGP_129S1SvImJ_P0024762 Sgk1 protein_coding protein_coding MGP_129S1SvImJ_T0024763.1 MGP_129S1SvImJ_G0017063.1 mouse_genomes_project 10 19801929 19819199 + MGP_129S1SvImJ_P0024763 Sgk1 protein_coding protein_coding MGP_129S1SvImJ_T0024764.1 MGP_129S1SvImJ_G0017063.1 mouse_genomes_project 10 19815527 19823204 + MGP_129S1SvImJ_P0024764 Sgk1 protein_coding protein_coding MGP_129S1SvImJ_T0024765.1 MGP_129S1SvImJ_G0017063.1 mouse_genomes_project 10 19815527 19819180 + MGP_129S1SvImJ_P0024765 Sgk1 protein_coding protein_coding MGP_129S1SvImJ_T0024766.1 MGP_129S1SvImJ_G0017063.1 mouse_genomes_project 10 19817200 19823197 + MGP_129S1SvImJ_P0024766 Sgk1 protein_coding protein_coding MGP_129S1SvImJ_T0024767.1 MGP_129S1SvImJ_G0017063.1 mouse_genomes_project 10 19817993 19818907 + Sgk1 protein_coding retained_intron MGP_129S1SvImJ_T0024768.1 MGP_129S1SvImJ_G0017063.1 mouse_genomes_project 10 19818001 19823208 + MGP_129S1SvImJ_P0024768 Sgk1 protein_coding protein_coding MGP_129S1SvImJ_T0024769.1 MGP_129S1SvImJ_G0017063.1 mouse_genomes_project 10 19818021 19819647 + Sgk1 protein_coding retained_intron MGP_129S1SvImJ_T0024770.1 MGP_129S1SvImJ_G0017063.1 mouse_genomes_project 10 19818220 19820742 + MGP_129S1SvImJ_P0024770 Sgk1 protein_coding protein_coding MGP_129S1SvImJ_T0024771.1 MGP_129S1SvImJ_G0017063.1 mouse_genomes_project 10 19819896 19821546 + Sgk1 protein_coding retained_intron MGP_129S1SvImJ_T0000858.1 MGP_129S1SvImJ_G0000791.1 mouse_genomes_project 10 120988077 120988427 + TEC TEC MGP_129S1SvImJ_T0099203.1 MGP_129S1SvImJ_G0037270.1 mouse_genomes_project 10 106016754 106016863 + Gm25143 snRNA snRNA MGP_129S1SvImJ_T0098296.1 MGP_129S1SvImJ_G0036381.1 mouse_genomes_project 10 119365205 119367439 + pseudogene pseudogene MGP_129S1SvImJ_T0003074.1 MGP_129S1SvImJ_G0002874.1 mouse_genomes_project 10 80974702 80975237 + Gm15123 antisense antisense MGP_129S1SvImJ_T0026793.1 MGP_129S1SvImJ_G0017637.1 mouse_genomes_project 10 90759093 90813645 - MGP_129S1SvImJ_P0026793 Slc17a8 protein_coding protein_coding MGP_129S1SvImJ_T0003095.1 MGP_129S1SvImJ_G0002890.1 mouse_genomes_project 10 87960307 88020674 + Gm16271 antisense antisense MGP_129S1SvImJ_T0012406.1 MGP_129S1SvImJ_G0010495.1 mouse_genomes_project 10 15461824 15462764 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011307.1 MGP_129S1SvImJ_G0009423.1 mouse_genomes_project 10 117572145 117572470 - Gm25319 misc_RNA misc_RNA MGP_129S1SvImJ_T0006110.1 MGP_129S1SvImJ_G0005116.1 mouse_genomes_project 10 41486414 41488461 - Gm26860 lincRNA lincRNA MGP_129S1SvImJ_T0003116.1 MGP_129S1SvImJ_G0002902.1 mouse_genomes_project 10 122530957 122531903 - Gm16321 antisense antisense MGP_129S1SvImJ_T0006125.1 MGP_129S1SvImJ_G0005127.1 mouse_genomes_project 10 66625367 66633124 - 1110002J07Rik lincRNA lincRNA MGP_129S1SvImJ_T0026083.1 MGP_129S1SvImJ_G0017462.1 mouse_genomes_project 10 80371424 80380655 + MGP_129S1SvImJ_P0026083 Misp protein_coding protein_coding MGP_129S1SvImJ_T0026084.1 MGP_129S1SvImJ_G0017462.1 mouse_genomes_project 10 80373030 80380655 + MGP_129S1SvImJ_P0026084 Misp protein_coding protein_coding MGP_129S1SvImJ_T0026246.1 MGP_129S1SvImJ_G0017495.1 mouse_genomes_project 10 80917845 80920376 - MGP_129S1SvImJ_P0026246 2310011J03Rik protein_coding protein_coding MGP_129S1SvImJ_T0003059.1 MGP_129S1SvImJ_G0002861.1 mouse_genomes_project 10 62554198 62556063 - Gm16143 antisense antisense MGP_129S1SvImJ_T0024705.1 MGP_129S1SvImJ_G0017045.1 mouse_genomes_project 10 17312627 17332151 + MGP_129S1SvImJ_P0024705 Ifngr1 protein_coding protein_coding MGP_129S1SvImJ_T0024706.1 MGP_129S1SvImJ_G0017045.1 mouse_genomes_project 10 17312636 17318539 + Ifngr1 protein_coding retained_intron MGP_129S1SvImJ_T0024707.1 MGP_129S1SvImJ_G0017045.1 mouse_genomes_project 10 17312709 17324343 + MGP_129S1SvImJ_P0024707 Ifngr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024708.1 MGP_129S1SvImJ_G0017045.1 mouse_genomes_project 10 17312726 17322091 + MGP_129S1SvImJ_P0024708 Ifngr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024709.1 MGP_129S1SvImJ_G0017045.1 mouse_genomes_project 10 17312735 17324363 + MGP_129S1SvImJ_P0024709 Ifngr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024710.1 MGP_129S1SvImJ_G0017045.1 mouse_genomes_project 10 17327840 17331178 + Ifngr1 protein_coding retained_intron MGP_129S1SvImJ_T0009650.1 MGP_129S1SvImJ_G0007766.1 mouse_genomes_project 10 131761919 131761997 + Mir677 miRNA miRNA MGP_129S1SvImJ_T0099158.1 MGP_129S1SvImJ_G0037225.1 mouse_genomes_project 10 10173534 10173634 - Gm23044 snRNA snRNA MGP_129S1SvImJ_T0026513.1 MGP_129S1SvImJ_G0017566.1 mouse_genomes_project 10 82306303 82322289 + Tle2 protein_coding retained_intron MGP_129S1SvImJ_T0026514.1 MGP_129S1SvImJ_G0017566.1 mouse_genomes_project 10 82306476 82307655 + MGP_129S1SvImJ_P0026514 Tle2 protein_coding protein_coding MGP_129S1SvImJ_T0026515.1 MGP_129S1SvImJ_G0017566.1 mouse_genomes_project 10 82306481 82312148 + MGP_129S1SvImJ_P0026515 Tle2 protein_coding protein_coding MGP_129S1SvImJ_T0026516.1 MGP_129S1SvImJ_G0017566.1 mouse_genomes_project 10 82307082 82322293 + Tle2 protein_coding retained_intron MGP_129S1SvImJ_T0026517.1 MGP_129S1SvImJ_G0017566.1 mouse_genomes_project 10 82307084 82322296 + MGP_129S1SvImJ_P0026517 Tle2 protein_coding protein_coding MGP_129S1SvImJ_T0026518.1 MGP_129S1SvImJ_G0017566.1 mouse_genomes_project 10 82307153 82322296 + MGP_129S1SvImJ_P0026518 Tle2 protein_coding protein_coding MGP_129S1SvImJ_T0026519.1 MGP_129S1SvImJ_G0017566.1 mouse_genomes_project 10 82307239 82322291 + Tle2 protein_coding retained_intron MGP_129S1SvImJ_T0026520.1 MGP_129S1SvImJ_G0017566.1 mouse_genomes_project 10 82307321 82312458 + MGP_129S1SvImJ_P0026520 Tle2 protein_coding protein_coding MGP_129S1SvImJ_T0026521.1 MGP_129S1SvImJ_G0017566.1 mouse_genomes_project 10 82307354 82322668 + MGP_129S1SvImJ_P0026521 Tle2 protein_coding protein_coding MGP_129S1SvImJ_T0026522.1 MGP_129S1SvImJ_G0017566.1 mouse_genomes_project 10 82312656 82318750 + Tle2 protein_coding retained_intron MGP_129S1SvImJ_T0026523.1 MGP_129S1SvImJ_G0017566.1 mouse_genomes_project 10 82314365 82318707 + Tle2 protein_coding retained_intron MGP_129S1SvImJ_T0026524.1 MGP_129S1SvImJ_G0017566.1 mouse_genomes_project 10 82318914 82319769 + Tle2 protein_coding retained_intron MGP_129S1SvImJ_T0026525.1 MGP_129S1SvImJ_G0017566.1 mouse_genomes_project 10 82319248 82322246 + Tle2 protein_coding retained_intron MGP_129S1SvImJ_T0026526.1 MGP_129S1SvImJ_G0017566.1 mouse_genomes_project 10 82319791 82322296 + MGP_129S1SvImJ_P0026526 Tle2 protein_coding protein_coding MGP_129S1SvImJ_T0026527.1 MGP_129S1SvImJ_G0017566.1 mouse_genomes_project 10 82319821 82322296 + MGP_129S1SvImJ_P0026527 Tle2 protein_coding protein_coding MGP_129S1SvImJ_T0026528.1 MGP_129S1SvImJ_G0017566.1 mouse_genomes_project 10 82320463 82322124 + Tle2 protein_coding retained_intron MGP_129S1SvImJ_T0099152.1 MGP_129S1SvImJ_G0037219.1 mouse_genomes_project 10 1067045 1067202 + Gm25515 snRNA snRNA MGP_129S1SvImJ_T0027078.1 MGP_129S1SvImJ_G0017722.1 mouse_genomes_project 10 113927701 113930061 + MGP_129S1SvImJ_P0027078 Phlda1 protein_coding protein_coding MGP_129S1SvImJ_T0027079.1 MGP_129S1SvImJ_G0017722.1 mouse_genomes_project 10 113929111 113929581 + Phlda1 protein_coding processed_transcript MGP_129S1SvImJ_T0012399.1 MGP_129S1SvImJ_G0010488.1 mouse_genomes_project 10 895747 896646 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0027543.1 MGP_129S1SvImJ_G0017883.1 mouse_genomes_project 10 132593381 132597716 - MGP_129S1SvImJ_P0027543 Tmem198b protein_coding protein_coding MGP_129S1SvImJ_T0027544.1 MGP_129S1SvImJ_G0017883.1 mouse_genomes_project 10 132593450 132597307 - MGP_129S1SvImJ_P0027544 Tmem198b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027545.1 MGP_129S1SvImJ_G0017883.1 mouse_genomes_project 10 132594186 132597063 - MGP_129S1SvImJ_P0027545 Tmem198b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027043.1 MGP_129S1SvImJ_G0017708.1 mouse_genomes_project 10 109676369 109679566 - MGP_129S1SvImJ_P0027043 Myf5 protein_coding protein_coding MGP_129S1SvImJ_T0025202.1 MGP_129S1SvImJ_G0017230.1 mouse_genomes_project 10 52731922 52826007 - MGP_129S1SvImJ_P0025202 Mcm9 protein_coding protein_coding MGP_129S1SvImJ_T0025203.1 MGP_129S1SvImJ_G0017230.1 mouse_genomes_project 10 52732917 52792449 - MGP_129S1SvImJ_P0025203 Mcm9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0027217.1 MGP_129S1SvImJ_G0017771.1 mouse_genomes_project 10 123213746 123246986 - MGP_129S1SvImJ_P0027217 Helb protein_coding protein_coding MGP_129S1SvImJ_T0027218.1 MGP_129S1SvImJ_G0017771.1 mouse_genomes_project 10 123214846 123223931 - Helb protein_coding retained_intron MGP_129S1SvImJ_T0027219.1 MGP_129S1SvImJ_G0017771.1 mouse_genomes_project 10 123214908 123246864 - MGP_129S1SvImJ_P0027219 Helb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026574.1 MGP_129S1SvImJ_G0017576.1 mouse_genomes_project 10 83162022 83169433 - MGP_129S1SvImJ_P0026574 Gm1553 protein_coding protein_coding MGP_129S1SvImJ_T0024649.1 MGP_129S1SvImJ_G0017028.1 mouse_genomes_project 10 12146045 12204027 - MGP_129S1SvImJ_P0024649 Vta1 protein_coding protein_coding MGP_129S1SvImJ_T0024650.1 MGP_129S1SvImJ_G0017028.1 mouse_genomes_project 10 12146645 12203967 - MGP_129S1SvImJ_P0024650 Vta1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024651.1 MGP_129S1SvImJ_G0017028.1 mouse_genomes_project 10 12146953 12162222 - Vta1 protein_coding retained_intron MGP_129S1SvImJ_T0024652.1 MGP_129S1SvImJ_G0017028.1 mouse_genomes_project 10 12147078 12203926 - MGP_129S1SvImJ_P0024652 Vta1 protein_coding protein_coding MGP_129S1SvImJ_T0024653.1 MGP_129S1SvImJ_G0017028.1 mouse_genomes_project 10 12147129 12180667 - MGP_129S1SvImJ_P0024653 Vta1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024654.1 MGP_129S1SvImJ_G0017028.1 mouse_genomes_project 10 12181458 12203932 - Vta1 protein_coding processed_transcript MGP_129S1SvImJ_T0024403.1 MGP_129S1SvImJ_G0016975.1 mouse_genomes_project 10 927542 1125177 + MGP_129S1SvImJ_P0024403 Mthfd1l protein_coding protein_coding MGP_129S1SvImJ_T0024404.1 MGP_129S1SvImJ_G0016975.1 mouse_genomes_project 10 927555 1137150 + MGP_129S1SvImJ_P0024404 Mthfd1l protein_coding protein_coding MGP_129S1SvImJ_T0024405.1 MGP_129S1SvImJ_G0016975.1 mouse_genomes_project 10 927568 1125177 + MGP_129S1SvImJ_P0024405 Mthfd1l protein_coding protein_coding MGP_129S1SvImJ_T0024406.1 MGP_129S1SvImJ_G0016975.1 mouse_genomes_project 10 990421 1008784 + Mthfd1l protein_coding processed_transcript MGP_129S1SvImJ_T0027600.1 MGP_129S1SvImJ_G0017918.1 mouse_genomes_project 10 133510028 133512566 - MGP_129S1SvImJ_P0027600 protein_coding protein_coding MGP_129S1SvImJ_T0026356.1 MGP_129S1SvImJ_G0017527.1 mouse_genomes_project 10 81570152 81571672 - MGP_129S1SvImJ_P0026356 Timm13 protein_coding protein_coding MGP_129S1SvImJ_T0003065.1 MGP_129S1SvImJ_G0002866.1 mouse_genomes_project 10 76140075 76143030 - Gm867 antisense antisense MGP_129S1SvImJ_T0025901.1 MGP_129S1SvImJ_G0017399.1 mouse_genomes_project 10 77916377 77934534 + MGP_129S1SvImJ_P0025901 Pttg1ip protein_coding protein_coding MGP_129S1SvImJ_T0025902.1 MGP_129S1SvImJ_G0017399.1 mouse_genomes_project 10 77916413 77923231 + Pttg1ip protein_coding retained_intron MGP_129S1SvImJ_T0025903.1 MGP_129S1SvImJ_G0017399.1 mouse_genomes_project 10 77916415 77929701 + MGP_129S1SvImJ_P0025903 Pttg1ip protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025904.1 MGP_129S1SvImJ_G0017399.1 mouse_genomes_project 10 77916460 77933137 + MGP_129S1SvImJ_P0025904 Pttg1ip protein_coding protein_coding MGP_129S1SvImJ_T0025905.1 MGP_129S1SvImJ_G0017399.1 mouse_genomes_project 10 77916479 77928713 + MGP_129S1SvImJ_P0025905 Pttg1ip protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025906.1 MGP_129S1SvImJ_G0017399.1 mouse_genomes_project 10 77917066 77933071 + MGP_129S1SvImJ_P0025906 Pttg1ip protein_coding protein_coding MGP_129S1SvImJ_T0025907.1 MGP_129S1SvImJ_G0017399.1 mouse_genomes_project 10 77918602 77928801 + MGP_129S1SvImJ_P0025907 Pttg1ip protein_coding protein_coding MGP_129S1SvImJ_T0025908.1 MGP_129S1SvImJ_G0017399.1 mouse_genomes_project 10 77925195 77933034 + Pttg1ip protein_coding retained_intron MGP_129S1SvImJ_T0025909.1 MGP_129S1SvImJ_G0017399.1 mouse_genomes_project 10 77928138 77932932 + Pttg1ip protein_coding retained_intron MGP_129S1SvImJ_T0027489.1 MGP_129S1SvImJ_G0017859.1 mouse_genomes_project 10 132043709 132048197 + MGP_129S1SvImJ_P0027489 Cnpy2 protein_coding protein_coding MGP_129S1SvImJ_T0024951.1 MGP_129S1SvImJ_G0017145.1 mouse_genomes_project 10 35565125 35570662 - MGP_129S1SvImJ_P0024951 Marcks protein_coding protein_coding MGP_129S1SvImJ_T0009612.1 MGP_129S1SvImJ_G0007728.1 mouse_genomes_project 10 80418824 80418890 + Mir6910 miRNA miRNA MGP_129S1SvImJ_T0006099.1 MGP_129S1SvImJ_G0005106.1 mouse_genomes_project 10 19498308 19519112 + Gm5420 lincRNA lincRNA MGP_129S1SvImJ_T0006100.1 MGP_129S1SvImJ_G0005106.1 mouse_genomes_project 10 19502740 19504367 + Gm5420 lincRNA lincRNA MGP_129S1SvImJ_T0026965.1 MGP_129S1SvImJ_G0017679.1 mouse_genomes_project 10 99426325 99426640 - MGP_129S1SvImJ_P0026965 Gm10754 protein_coding protein_coding MGP_129S1SvImJ_T0009652.1 MGP_129S1SvImJ_G0007768.1 mouse_genomes_project 10 132116547 132116616 + Mir6914 miRNA miRNA MGP_129S1SvImJ_T0025752.1 MGP_129S1SvImJ_G0017358.1 mouse_genomes_project 10 75735832 75750970 + MGP_129S1SvImJ_P0025752 Ggt1 protein_coding protein_coding MGP_129S1SvImJ_T0025753.1 MGP_129S1SvImJ_G0017358.1 mouse_genomes_project 10 75735883 75751017 + MGP_129S1SvImJ_P0025753 Ggt1 protein_coding protein_coding MGP_129S1SvImJ_T0025754.1 MGP_129S1SvImJ_G0017358.1 mouse_genomes_project 10 75738376 75748552 + MGP_129S1SvImJ_P0025754 Ggt1 protein_coding protein_coding MGP_129S1SvImJ_T0025755.1 MGP_129S1SvImJ_G0017358.1 mouse_genomes_project 10 75738383 75750970 + MGP_129S1SvImJ_P0025755 Ggt1 protein_coding protein_coding MGP_129S1SvImJ_T0025756.1 MGP_129S1SvImJ_G0017358.1 mouse_genomes_project 10 75740520 75753632 + MGP_129S1SvImJ_P0025756 Ggt1 protein_coding protein_coding MGP_129S1SvImJ_T0025757.1 MGP_129S1SvImJ_G0017358.1 mouse_genomes_project 10 75740525 75754080 + MGP_129S1SvImJ_P0025757 Ggt1 protein_coding protein_coding MGP_129S1SvImJ_T0025758.1 MGP_129S1SvImJ_G0017358.1 mouse_genomes_project 10 75742861 75753997 + MGP_129S1SvImJ_P0025758 Ggt1 protein_coding protein_coding MGP_129S1SvImJ_T0025759.1 MGP_129S1SvImJ_G0017358.1 mouse_genomes_project 10 75742868 75751017 + MGP_129S1SvImJ_P0025759 Ggt1 protein_coding protein_coding MGP_129S1SvImJ_T0025760.1 MGP_129S1SvImJ_G0017358.1 mouse_genomes_project 10 75742883 75760915 + MGP_129S1SvImJ_P0025760 Ggt1 protein_coding protein_coding MGP_129S1SvImJ_T0025761.1 MGP_129S1SvImJ_G0017358.1 mouse_genomes_project 10 75742884 75750769 + MGP_129S1SvImJ_P0025761 Ggt1 protein_coding protein_coding MGP_129S1SvImJ_T0025762.1 MGP_129S1SvImJ_G0017358.1 mouse_genomes_project 10 75742889 75751017 + MGP_129S1SvImJ_P0025762 Ggt1 protein_coding protein_coding MGP_129S1SvImJ_T0025763.1 MGP_129S1SvImJ_G0017358.1 mouse_genomes_project 10 75742901 75750684 + MGP_129S1SvImJ_P0025763 Ggt1 protein_coding protein_coding MGP_129S1SvImJ_T0025764.1 MGP_129S1SvImJ_G0017358.1 mouse_genomes_project 10 75745751 75753635 + MGP_129S1SvImJ_P0025764 Ggt1 protein_coding protein_coding MGP_129S1SvImJ_T0025765.1 MGP_129S1SvImJ_G0017358.1 mouse_genomes_project 10 75745756 75754075 + MGP_129S1SvImJ_P0025765 Ggt1 protein_coding protein_coding MGP_129S1SvImJ_T0025766.1 MGP_129S1SvImJ_G0017358.1 mouse_genomes_project 10 75745795 75756148 + Ggt1 protein_coding processed_transcript MGP_129S1SvImJ_T0025767.1 MGP_129S1SvImJ_G0017358.1 mouse_genomes_project 10 75747673 75760897 + MGP_129S1SvImJ_P0025767 Ggt1 protein_coding protein_coding MGP_129S1SvImJ_T0025768.1 MGP_129S1SvImJ_G0017358.1 mouse_genomes_project 10 75748111 75754098 + MGP_129S1SvImJ_P0025768 Ggt1 protein_coding protein_coding MGP_129S1SvImJ_T0025769.1 MGP_129S1SvImJ_G0017358.1 mouse_genomes_project 10 75750790 75759618 + MGP_129S1SvImJ_P0025769 Ggt1 protein_coding protein_coding MGP_129S1SvImJ_T0025770.1 MGP_129S1SvImJ_G0017358.1 mouse_genomes_project 10 75756084 75760873 + MGP_129S1SvImJ_P0025770 Ggt1 protein_coding protein_coding MGP_129S1SvImJ_T0025771.1 MGP_129S1SvImJ_G0017358.1 mouse_genomes_project 10 75759819 75760906 + Ggt1 protein_coding retained_intron MGP_129S1SvImJ_T0003077.1 MGP_129S1SvImJ_G0002877.1 mouse_genomes_project 10 81701139 81702601 + Gm16099 antisense antisense MGP_129S1SvImJ_T0003078.1 MGP_129S1SvImJ_G0002877.1 mouse_genomes_project 10 81701411 81702895 + Gm16099 antisense antisense MGP_129S1SvImJ_T0024865.1 MGP_129S1SvImJ_G0017106.1 mouse_genomes_project 10 26186236 26735127 + MGP_129S1SvImJ_P0024865 Ptprk protein_coding protein_coding MGP_129S1SvImJ_T0024866.1 MGP_129S1SvImJ_G0017106.1 mouse_genomes_project 10 26186497 26735056 + MGP_129S1SvImJ_P0024866 Ptprk protein_coding unknown_likely_coding MGP_129S1SvImJ_T0024867.1 MGP_129S1SvImJ_G0017106.1 mouse_genomes_project 10 26598983 26735056 + MGP_129S1SvImJ_P0024867 Ptprk protein_coding unknown_likely_coding MGP_129S1SvImJ_T0012437.1 MGP_129S1SvImJ_G0010526.1 mouse_genomes_project 10 62420013 62420639 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003071.1 MGP_129S1SvImJ_G0002871.1 mouse_genomes_project 10 76798258 76814610 - 4930483K19Rik antisense antisense MGP_129S1SvImJ_T0024660.1 MGP_129S1SvImJ_G0017030.1 mouse_genomes_project 10 12212286 12214878 - MGP_129S1SvImJ_P0024660 Gje1 protein_coding protein_coding MGP_129S1SvImJ_T0026713.1 MGP_129S1SvImJ_G0017619.1 mouse_genomes_project 10 88549694 88617080 + MGP_129S1SvImJ_P0026713 Pah protein_coding protein_coding MGP_129S1SvImJ_T0026714.1 MGP_129S1SvImJ_G0017619.1 mouse_genomes_project 10 88549829 88616978 + MGP_129S1SvImJ_P0026714 Pah protein_coding protein_coding MGP_129S1SvImJ_T0026715.1 MGP_129S1SvImJ_G0017619.1 mouse_genomes_project 10 88549926 88616799 + MGP_129S1SvImJ_P0026715 Pah protein_coding protein_coding MGP_129S1SvImJ_T0026716.1 MGP_129S1SvImJ_G0017619.1 mouse_genomes_project 10 88578898 88602477 + MGP_129S1SvImJ_P0026716 Pah protein_coding protein_coding MGP_129S1SvImJ_T0025668.1 MGP_129S1SvImJ_G0017346.1 mouse_genomes_project 10 72710371 72730394 + MGP_129S1SvImJ_P0025668 Zwint protein_coding protein_coding MGP_129S1SvImJ_T0025669.1 MGP_129S1SvImJ_G0017346.1 mouse_genomes_project 10 72710421 72725221 + MGP_129S1SvImJ_P0025669 Zwint protein_coding protein_coding MGP_129S1SvImJ_T0025670.1 MGP_129S1SvImJ_G0017346.1 mouse_genomes_project 10 72710422 72724597 + MGP_129S1SvImJ_P0025670 Zwint protein_coding protein_coding MGP_129S1SvImJ_T0025671.1 MGP_129S1SvImJ_G0017346.1 mouse_genomes_project 10 72710969 72712125 + Zwint protein_coding retained_intron MGP_129S1SvImJ_T0025672.1 MGP_129S1SvImJ_G0017346.1 mouse_genomes_project 10 72711763 72712915 + Zwint protein_coding retained_intron MGP_129S1SvImJ_T0025673.1 MGP_129S1SvImJ_G0017346.1 mouse_genomes_project 10 72712117 72729754 + Zwint protein_coding processed_transcript MGP_129S1SvImJ_T0009658.1 MGP_129S1SvImJ_G0007774.1 mouse_genomes_project 10 132337976 132338037 - Mir6917 miRNA miRNA MGP_129S1SvImJ_T0099212.1 MGP_129S1SvImJ_G0037279.1 mouse_genomes_project 10 117656939 117657046 + Gm22070 snRNA snRNA MGP_129S1SvImJ_T0025147.1 MGP_129S1SvImJ_G0017206.1 mouse_genomes_project 10 43952416 44046493 + MGP_129S1SvImJ_P0025147 Prep protein_coding protein_coding MGP_129S1SvImJ_T0012420.1 MGP_129S1SvImJ_G0010509.1 mouse_genomes_project 10 38275278 38275888 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0026406.1 MGP_129S1SvImJ_G0017541.1 mouse_genomes_project 10 81880645 81890216 + MGP_129S1SvImJ_P0026406 Dapk3 protein_coding protein_coding MGP_129S1SvImJ_T0026039.1 MGP_129S1SvImJ_G0017446.1 mouse_genomes_project 10 80107567 80121553 - MGP_129S1SvImJ_P0026039 Theg protein_coding protein_coding MGP_129S1SvImJ_T0026040.1 MGP_129S1SvImJ_G0017446.1 mouse_genomes_project 10 80107678 80112961 - Theg protein_coding retained_intron MGP_129S1SvImJ_T0026041.1 MGP_129S1SvImJ_G0017446.1 mouse_genomes_project 10 80107678 80121748 - MGP_129S1SvImJ_P0026041 Theg protein_coding protein_coding MGP_129S1SvImJ_T0027615.1 MGP_129S1SvImJ_G0017927.1 mouse_genomes_project 10 133629167 133637875 - MGP_129S1SvImJ_P0027615 Olfr806 protein_coding protein_coding MGP_129S1SvImJ_T0027616.1 MGP_129S1SvImJ_G0017927.1 mouse_genomes_project 10 133629167 133634261 - MGP_129S1SvImJ_P0027616 Olfr806 protein_coding protein_coding MGP_129S1SvImJ_T0003127.1 MGP_129S1SvImJ_G0002912.1 mouse_genomes_project 10 132269303 132272677 + Gm29585 antisense antisense MGP_129S1SvImJ_T0003128.1 MGP_129S1SvImJ_G0002912.1 mouse_genomes_project 10 132271611 132272698 + Gm29585 antisense antisense MGP_129S1SvImJ_T0003129.1 MGP_129S1SvImJ_G0002912.1 mouse_genomes_project 10 132272368 132297423 + Gm29585 antisense antisense MGP_129S1SvImJ_T0024987.1 MGP_129S1SvImJ_G0017153.1 mouse_genomes_project 10 38255433 38401069 + MGP_129S1SvImJ_P0024987 Rev3l protein_coding protein_coding MGP_129S1SvImJ_T0024988.1 MGP_129S1SvImJ_G0017153.1 mouse_genomes_project 10 38255442 38401026 + MGP_129S1SvImJ_P0024988 Rev3l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024989.1 MGP_129S1SvImJ_G0017153.1 mouse_genomes_project 10 38255679 38401064 + MGP_129S1SvImJ_P0024989 Rev3l protein_coding protein_coding MGP_129S1SvImJ_T0024990.1 MGP_129S1SvImJ_G0017153.1 mouse_genomes_project 10 38351045 38401066 + MGP_129S1SvImJ_P0024990 Rev3l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024991.1 MGP_129S1SvImJ_G0017153.1 mouse_genomes_project 10 38354188 38368681 + Rev3l protein_coding retained_intron MGP_129S1SvImJ_T0024992.1 MGP_129S1SvImJ_G0017153.1 mouse_genomes_project 10 38384782 38388828 + Rev3l protein_coding retained_intron MGP_129S1SvImJ_T0024993.1 MGP_129S1SvImJ_G0017153.1 mouse_genomes_project 10 38392966 38400346 + Rev3l protein_coding retained_intron MGP_129S1SvImJ_T0099185.1 MGP_129S1SvImJ_G0037252.1 mouse_genomes_project 10 65864282 65864388 - Gm22829 snRNA snRNA MGP_129S1SvImJ_T0026021.1 MGP_129S1SvImJ_G0017441.1 mouse_genomes_project 10 79612409 79764366 + MGP_129S1SvImJ_P0026021 Vmn2r81 protein_coding protein_coding MGP_129S1SvImJ_T0026835.1 MGP_129S1SvImJ_G0017642.1 mouse_genomes_project 10 92257083 92359894 - MGP_129S1SvImJ_P0026835 Apaf1 protein_coding protein_coding MGP_129S1SvImJ_T0026836.1 MGP_129S1SvImJ_G0017642.1 mouse_genomes_project 10 92257085 92259363 - Apaf1 protein_coding retained_intron MGP_129S1SvImJ_T0026837.1 MGP_129S1SvImJ_G0017642.1 mouse_genomes_project 10 92257090 92360002 - MGP_129S1SvImJ_P0026837 Apaf1 protein_coding protein_coding MGP_129S1SvImJ_T0026838.1 MGP_129S1SvImJ_G0017642.1 mouse_genomes_project 10 92258374 92359936 - MGP_129S1SvImJ_P0026838 Apaf1 protein_coding protein_coding MGP_129S1SvImJ_T0026839.1 MGP_129S1SvImJ_G0017642.1 mouse_genomes_project 10 92265150 92269824 - Apaf1 protein_coding processed_transcript MGP_129S1SvImJ_T0026840.1 MGP_129S1SvImJ_G0017642.1 mouse_genomes_project 10 92266152 92269132 - Apaf1 protein_coding retained_intron MGP_129S1SvImJ_T0026841.1 MGP_129S1SvImJ_G0017642.1 mouse_genomes_project 10 92336385 92359661 - MGP_129S1SvImJ_P0026841 Apaf1 protein_coding protein_coding MGP_129S1SvImJ_T0026842.1 MGP_129S1SvImJ_G0017642.1 mouse_genomes_project 10 92338192 92360002 - MGP_129S1SvImJ_P0026842 Apaf1 protein_coding protein_coding MGP_129S1SvImJ_T0025317.1 MGP_129S1SvImJ_G0017266.1 mouse_genomes_project 10 59401599 59440425 - MGP_129S1SvImJ_P0025317 Chst3 protein_coding protein_coding MGP_129S1SvImJ_T0025318.1 MGP_129S1SvImJ_G0017266.1 mouse_genomes_project 10 59401601 59408775 - MGP_129S1SvImJ_P0025318 Chst3 protein_coding protein_coding MGP_129S1SvImJ_T0025319.1 MGP_129S1SvImJ_G0017266.1 mouse_genomes_project 10 59405672 59414295 - MGP_129S1SvImJ_P0025319 Chst3 protein_coding protein_coding MGP_129S1SvImJ_T0026802.1 MGP_129S1SvImJ_G0017640.1 mouse_genomes_project 10 90944988 91023764 + MGP_129S1SvImJ_P0026802 Uhrf1bp1l protein_coding protein_coding MGP_129S1SvImJ_T0026202.1 MGP_129S1SvImJ_G0017486.1 mouse_genomes_project 10 80751265 80755991 + MGP_129S1SvImJ_P0026202 Cirbp protein_coding protein_coding MGP_129S1SvImJ_T0026203.1 MGP_129S1SvImJ_G0017486.1 mouse_genomes_project 10 80753457 80757330 + MGP_129S1SvImJ_P0026203 Cirbp protein_coding protein_coding MGP_129S1SvImJ_T0026204.1 MGP_129S1SvImJ_G0017486.1 mouse_genomes_project 10 80753519 80758462 + MGP_129S1SvImJ_P0026204 Cirbp protein_coding protein_coding MGP_129S1SvImJ_T0026205.1 MGP_129S1SvImJ_G0017486.1 mouse_genomes_project 10 80753542 80755804 + Cirbp protein_coding retained_intron MGP_129S1SvImJ_T0026206.1 MGP_129S1SvImJ_G0017486.1 mouse_genomes_project 10 80753565 80756812 + Cirbp protein_coding retained_intron MGP_129S1SvImJ_T0026207.1 MGP_129S1SvImJ_G0017486.1 mouse_genomes_project 10 80755901 80756879 + Cirbp protein_coding retained_intron MGP_129S1SvImJ_T0026208.1 MGP_129S1SvImJ_G0017486.1 mouse_genomes_project 10 80757656 80758373 + Cirbp protein_coding retained_intron MGP_129S1SvImJ_T0099202.1 MGP_129S1SvImJ_G0037269.1 mouse_genomes_project 10 95654217 95654299 - Gm26122 snRNA snRNA MGP_129S1SvImJ_T0027020.1 MGP_129S1SvImJ_G0017699.1 mouse_genomes_project 10 105420434 105473868 + MGP_129S1SvImJ_P0027020 Slc6a15 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0027623.1 MGP_129S1SvImJ_G0017932.1 mouse_genomes_project 10 133689500 133690506 - MGP_129S1SvImJ_P0027623 Olfr810 protein_coding protein_coding MGP_129S1SvImJ_T0024927.1 MGP_129S1SvImJ_G0017133.1 mouse_genomes_project 10 32370115 32446607 + MGP_129S1SvImJ_P0024927 Trappc3l protein_coding protein_coding MGP_129S1SvImJ_T0025793.1 MGP_129S1SvImJ_G0017368.1 mouse_genomes_project 10 76052574 76053528 - MGP_129S1SvImJ_P0025793 Mif protein_coding protein_coding MGP_129S1SvImJ_T0025751.1 MGP_129S1SvImJ_G0017357.1 mouse_genomes_project 10 75724402 75734559 - MGP_129S1SvImJ_P0025751 Lrrc75b protein_coding protein_coding MGP_129S1SvImJ_T0027547.1 MGP_129S1SvImJ_G0017885.1 mouse_genomes_project 10 132611764 132615934 - MGP_129S1SvImJ_P0027547 Ormdl2 protein_coding protein_coding MGP_129S1SvImJ_T0024815.1 MGP_129S1SvImJ_G0017093.1 mouse_genomes_project 10 22626094 22696001 - MGP_129S1SvImJ_P0024815 Enpp1 protein_coding protein_coding MGP_129S1SvImJ_T0024816.1 MGP_129S1SvImJ_G0017093.1 mouse_genomes_project 10 22629615 22696002 - MGP_129S1SvImJ_P0024816 Enpp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024817.1 MGP_129S1SvImJ_G0017093.1 mouse_genomes_project 10 22629986 22695834 - MGP_129S1SvImJ_P0024817 Enpp1 protein_coding protein_coding MGP_129S1SvImJ_T0024818.1 MGP_129S1SvImJ_G0017093.1 mouse_genomes_project 10 22635927 22695840 - Enpp1 protein_coding retained_intron MGP_129S1SvImJ_T0024819.1 MGP_129S1SvImJ_G0017093.1 mouse_genomes_project 10 22656672 22662474 - Enpp1 protein_coding retained_intron MGP_129S1SvImJ_T0026351.1 MGP_129S1SvImJ_G0017523.1 mouse_genomes_project 10 81494838 81506071 - MGP_129S1SvImJ_P0026351 Lingo3 protein_coding protein_coding MGP_129S1SvImJ_T0027173.1 MGP_129S1SvImJ_G0017760.1 mouse_genomes_project 10 120576111 120582051 + Cpm protein_coding processed_transcript MGP_129S1SvImJ_T0027174.1 MGP_129S1SvImJ_G0017760.1 mouse_genomes_project 10 120576111 120615328 + Cpm protein_coding retained_intron MGP_129S1SvImJ_T0027175.1 MGP_129S1SvImJ_G0017760.1 mouse_genomes_project 10 120576111 120635381 + MGP_129S1SvImJ_P0027175 Cpm protein_coding protein_coding MGP_129S1SvImJ_T0027176.1 MGP_129S1SvImJ_G0017760.1 mouse_genomes_project 10 120623952 120632963 + Cpm protein_coding retained_intron MGP_129S1SvImJ_T0027247.1 MGP_129S1SvImJ_G0017782.1 mouse_genomes_project 10 124667483 124736876 - MGP_129S1SvImJ_P0027247 Rassf3 protein_coding protein_coding MGP_129S1SvImJ_T0027440.1 MGP_129S1SvImJ_G0017846.1 mouse_genomes_project 10 131732951 131752462 + MGP_129S1SvImJ_P0027440 Ptges3 protein_coding protein_coding MGP_129S1SvImJ_T0027441.1 MGP_129S1SvImJ_G0017846.1 mouse_genomes_project 10 131733008 131752272 + MGP_129S1SvImJ_P0027441 Ptges3 protein_coding protein_coding MGP_129S1SvImJ_T0027442.1 MGP_129S1SvImJ_G0017846.1 mouse_genomes_project 10 131743950 131747054 + Ptges3 protein_coding retained_intron MGP_129S1SvImJ_T0024921.1 MGP_129S1SvImJ_G0017128.1 mouse_genomes_project 10 32183624 32198531 + MGP_129S1SvImJ_P0024921 Sult3a1 protein_coding protein_coding MGP_129S1SvImJ_T0024704.1 MGP_129S1SvImJ_G0017044.1 mouse_genomes_project 10 17072702 17074753 + MGP_129S1SvImJ_P0024704 Olig3 protein_coding protein_coding MGP_129S1SvImJ_T0026073.1 MGP_129S1SvImJ_G0017458.1 mouse_genomes_project 10 80300589 80309954 - MGP_129S1SvImJ_P0026073 Rnf126 protein_coding protein_coding MGP_129S1SvImJ_T0025082.1 MGP_129S1SvImJ_G0017183.1 mouse_genomes_project 10 40873151 40970972 - MGP_129S1SvImJ_P0025082 Foxo3 protein_coding protein_coding MGP_129S1SvImJ_T0025083.1 MGP_129S1SvImJ_G0017183.1 mouse_genomes_project 10 40877102 40970962 - MGP_129S1SvImJ_P0025083 Foxo3 protein_coding protein_coding MGP_129S1SvImJ_T0025084.1 MGP_129S1SvImJ_G0017183.1 mouse_genomes_project 10 40889246 40970916 - MGP_129S1SvImJ_P0025084 Foxo3 protein_coding protein_coding MGP_129S1SvImJ_T0025085.1 MGP_129S1SvImJ_G0017183.1 mouse_genomes_project 10 40890553 40952658 - MGP_129S1SvImJ_P0025085 Foxo3 protein_coding protein_coding MGP_129S1SvImJ_T0025086.1 MGP_129S1SvImJ_G0017183.1 mouse_genomes_project 10 40940310 40970975 - MGP_129S1SvImJ_P0025086 Foxo3 protein_coding protein_coding MGP_129S1SvImJ_T0027155.1 MGP_129S1SvImJ_G0017750.1 mouse_genomes_project 10 119800368 119841097 + MGP_129S1SvImJ_P0027155 Best3 protein_coding protein_coding MGP_129S1SvImJ_T0009653.1 MGP_129S1SvImJ_G0007769.1 mouse_genomes_project 10 132122536 132122605 + Mir6915 miRNA miRNA MGP_129S1SvImJ_T0006118.1 MGP_129S1SvImJ_G0005124.1 mouse_genomes_project 10 64732357 64733199 - Gm28881 lincRNA lincRNA MGP_129S1SvImJ_T0027618.1 MGP_129S1SvImJ_G0017929.1 mouse_genomes_project 10 133664317 133667271 + MGP_129S1SvImJ_P0027618 Olfr808 protein_coding protein_coding MGP_129S1SvImJ_T0027619.1 MGP_129S1SvImJ_G0017929.1 mouse_genomes_project 10 133666332 133667271 + MGP_129S1SvImJ_P0027619 Olfr808 protein_coding protein_coding MGP_129S1SvImJ_T0026955.1 MGP_129S1SvImJ_G0017671.1 mouse_genomes_project 10 97131442 97150081 - MGP_129S1SvImJ_P0026955 Nudt4 protein_coding protein_coding MGP_129S1SvImJ_T0027046.1 MGP_129S1SvImJ_G0017711.1 mouse_genomes_project 10 109983697 110142793 - MGP_129S1SvImJ_P0027046 Otogl protein_coding protein_coding MGP_129S1SvImJ_T0027356.1 MGP_129S1SvImJ_G0017820.1 mouse_genomes_project 10 130941827 130944195 - MGP_129S1SvImJ_P0027356 Inhbe protein_coding protein_coding MGP_129S1SvImJ_T0024686.1 MGP_129S1SvImJ_G0017038.1 mouse_genomes_project 10 16070703 16208445 + MGP_129S1SvImJ_P0024686 Nhsl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024687.1 MGP_129S1SvImJ_G0017038.1 mouse_genomes_project 10 16087927 16102472 + Nhsl1 protein_coding processed_transcript MGP_129S1SvImJ_T0024688.1 MGP_129S1SvImJ_G0017038.1 mouse_genomes_project 10 16087964 16196666 + Nhsl1 protein_coding retained_intron MGP_129S1SvImJ_T0024689.1 MGP_129S1SvImJ_G0017038.1 mouse_genomes_project 10 16087964 16218048 + MGP_129S1SvImJ_P0024689 Nhsl1 protein_coding protein_coding MGP_129S1SvImJ_T0024690.1 MGP_129S1SvImJ_G0017038.1 mouse_genomes_project 10 16150754 16154308 + Nhsl1 protein_coding retained_intron MGP_129S1SvImJ_T0024691.1 MGP_129S1SvImJ_G0017038.1 mouse_genomes_project 10 16150834 16182231 + Nhsl1 protein_coding processed_transcript MGP_129S1SvImJ_T0024692.1 MGP_129S1SvImJ_G0017038.1 mouse_genomes_project 10 16150847 16210115 + MGP_129S1SvImJ_P0024692 Nhsl1 protein_coding protein_coding MGP_129S1SvImJ_T0024693.1 MGP_129S1SvImJ_G0017038.1 mouse_genomes_project 10 16150847 16218045 + MGP_129S1SvImJ_P0024693 Nhsl1 protein_coding protein_coding MGP_129S1SvImJ_T0024712.1 MGP_129S1SvImJ_G0017047.1 mouse_genomes_project 10 17370721 17389088 + MGP_129S1SvImJ_P0024712 protein_coding protein_coding MGP_129S1SvImJ_T0024425.1 MGP_129S1SvImJ_G0016980.1 mouse_genomes_project 10 1484178 1581461 + MGP_129S1SvImJ_P0024425 Ccdc170 protein_coding protein_coding MGP_129S1SvImJ_T0024426.1 MGP_129S1SvImJ_G0016980.1 mouse_genomes_project 10 1524068 1581461 + MGP_129S1SvImJ_P0024426 Ccdc170 protein_coding protein_coding MGP_129S1SvImJ_T0024427.1 MGP_129S1SvImJ_G0016980.1 mouse_genomes_project 10 1525729 1528442 + MGP_129S1SvImJ_P0024427 Ccdc170 protein_coding protein_coding MGP_129S1SvImJ_T0024428.1 MGP_129S1SvImJ_G0016980.1 mouse_genomes_project 10 1553224 1561958 + Ccdc170 protein_coding processed_transcript MGP_129S1SvImJ_T0009588.1 MGP_129S1SvImJ_G0007704.1 mouse_genomes_project 10 40328300 40328355 + Mir3473b miRNA miRNA MGP_129S1SvImJ_T0102123.1 MGP_129S1SvImJ_G0039958.1 mouse_genomes_project 10 133924530 133924719 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0027016.1 MGP_129S1SvImJ_G0017698.1 mouse_genomes_project 10 105082026 105286074 - MGP_129S1SvImJ_P0027016 Lrriq1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0027017.1 MGP_129S1SvImJ_G0017698.1 mouse_genomes_project 10 105102261 105286187 - MGP_129S1SvImJ_P0027017 Lrriq1 protein_coding protein_coding MGP_129S1SvImJ_T0027018.1 MGP_129S1SvImJ_G0017698.1 mouse_genomes_project 10 105263551 105286187 - MGP_129S1SvImJ_P0027018 Lrriq1 protein_coding protein_coding MGP_129S1SvImJ_T0027019.1 MGP_129S1SvImJ_G0017698.1 mouse_genomes_project 10 105264481 105286158 - MGP_129S1SvImJ_P0027019 Lrriq1 protein_coding protein_coding MGP_129S1SvImJ_T0003124.1 MGP_129S1SvImJ_G0002909.1 mouse_genomes_project 10 131289531 131291177 + Gm16229 antisense antisense MGP_129S1SvImJ_T0027486.1 MGP_129S1SvImJ_G0017857.1 mouse_genomes_project 10 132015950 132017894 - MGP_129S1SvImJ_P0027486 Il23a protein_coding protein_coding MGP_129S1SvImJ_T0024914.1 MGP_129S1SvImJ_G0017125.1 mouse_genomes_project 10 31368058 31785353 + MGP_129S1SvImJ_P0024914 Trdn protein_coding protein_coding MGP_129S1SvImJ_T0024915.1 MGP_129S1SvImJ_G0017125.1 mouse_genomes_project 10 31368299 31783162 + MGP_129S1SvImJ_P0024915 Trdn protein_coding unknown_likely_coding MGP_129S1SvImJ_T0027245.1 MGP_129S1SvImJ_G0017780.1 mouse_genomes_project 10 124505673 124559432 - MGP_129S1SvImJ_P0027245 Tbc1d30 protein_coding protein_coding MGP_129S1SvImJ_T0025065.1 MGP_129S1SvImJ_G0017180.1 mouse_genomes_project 10 40380487 40473592 - MGP_129S1SvImJ_P0025065 Cep57l1 protein_coding protein_coding MGP_129S1SvImJ_T0025066.1 MGP_129S1SvImJ_G0017180.1 mouse_genomes_project 10 40380489 40473626 - MGP_129S1SvImJ_P0025066 Cep57l1 protein_coding protein_coding MGP_129S1SvImJ_T0025067.1 MGP_129S1SvImJ_G0017180.1 mouse_genomes_project 10 40381493 40473601 - MGP_129S1SvImJ_P0025067 Cep57l1 protein_coding protein_coding MGP_129S1SvImJ_T0025068.1 MGP_129S1SvImJ_G0017180.1 mouse_genomes_project 10 40382813 40384537 - MGP_129S1SvImJ_P0025068 Cep57l1 protein_coding protein_coding MGP_129S1SvImJ_T0025069.1 MGP_129S1SvImJ_G0017180.1 mouse_genomes_project 10 40387182 40390565 - Cep57l1 protein_coding retained_intron MGP_129S1SvImJ_T0025070.1 MGP_129S1SvImJ_G0017180.1 mouse_genomes_project 10 40390145 40410455 - Cep57l1 protein_coding retained_intron MGP_129S1SvImJ_T0025071.1 MGP_129S1SvImJ_G0017180.1 mouse_genomes_project 10 40406525 40473591 - Cep57l1 protein_coding retained_intron MGP_129S1SvImJ_T0025072.1 MGP_129S1SvImJ_G0017180.1 mouse_genomes_project 10 40408557 40473609 - Cep57l1 protein_coding retained_intron MGP_129S1SvImJ_T0098289.1 MGP_129S1SvImJ_G0036374.1 mouse_genomes_project 10 57946291 57946860 - pseudogene pseudogene MGP_129S1SvImJ_T0000844.1 MGP_129S1SvImJ_G0000778.1 mouse_genomes_project 10 77254947 77255625 - TEC TEC MGP_129S1SvImJ_T0099189.1 MGP_129S1SvImJ_G0037256.1 mouse_genomes_project 10 80470170 80470277 + Gm24019 snRNA snRNA MGP_129S1SvImJ_T0025807.1 MGP_129S1SvImJ_G0017373.1 mouse_genomes_project 10 76145414 76151759 + MGP_129S1SvImJ_P0025807 Vpreb3 protein_coding protein_coding MGP_129S1SvImJ_T0025808.1 MGP_129S1SvImJ_G0017373.1 mouse_genomes_project 10 76150421 76151779 + MGP_129S1SvImJ_P0025808 Vpreb3 protein_coding protein_coding MGP_129S1SvImJ_T0026675.1 MGP_129S1SvImJ_G0017607.1 mouse_genomes_project 10 86968333 86995804 + MGP_129S1SvImJ_P0026675 Fbxo7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026676.1 MGP_129S1SvImJ_G0017607.1 mouse_genomes_project 10 86968365 86975471 + MGP_129S1SvImJ_P0026676 Fbxo7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026677.1 MGP_129S1SvImJ_G0017607.1 mouse_genomes_project 10 86968369 87001077 + MGP_129S1SvImJ_P0026677 Fbxo7 protein_coding protein_coding MGP_129S1SvImJ_T0026678.1 MGP_129S1SvImJ_G0017607.1 mouse_genomes_project 10 86968535 86995834 + MGP_129S1SvImJ_P0026678 Fbxo7 protein_coding protein_coding MGP_129S1SvImJ_T0026679.1 MGP_129S1SvImJ_G0017607.1 mouse_genomes_project 10 86979317 86999382 + Fbxo7 protein_coding processed_transcript MGP_129S1SvImJ_T0026680.1 MGP_129S1SvImJ_G0017607.1 mouse_genomes_project 10 86989962 86994320 + Fbxo7 protein_coding retained_intron MGP_129S1SvImJ_T0025452.1 MGP_129S1SvImJ_G0017300.1 mouse_genomes_project 10 61925722 61960069 - MGP_129S1SvImJ_P0025452 Srgn protein_coding protein_coding MGP_129S1SvImJ_T0025453.1 MGP_129S1SvImJ_G0017300.1 mouse_genomes_project 10 61926317 61940433 - MGP_129S1SvImJ_P0025453 Srgn protein_coding protein_coding MGP_129S1SvImJ_T0025454.1 MGP_129S1SvImJ_G0017300.1 mouse_genomes_project 10 61926573 61940616 - MGP_129S1SvImJ_P0025454 Srgn protein_coding protein_coding MGP_129S1SvImJ_T0025455.1 MGP_129S1SvImJ_G0017300.1 mouse_genomes_project 10 61930634 61960043 - MGP_129S1SvImJ_P0025455 Srgn protein_coding protein_coding MGP_129S1SvImJ_T0025456.1 MGP_129S1SvImJ_G0017300.1 mouse_genomes_project 10 61940353 61940775 - MGP_129S1SvImJ_P0025456 Srgn protein_coding protein_coding MGP_129S1SvImJ_T0025457.1 MGP_129S1SvImJ_G0017300.1 mouse_genomes_project 10 61940419 61960043 - Srgn protein_coding processed_transcript MGP_129S1SvImJ_T0006112.1 MGP_129S1SvImJ_G0005118.1 mouse_genomes_project 10 56842270 56850238 - 4930467K11Rik lincRNA lincRNA MGP_129S1SvImJ_T0006137.1 MGP_129S1SvImJ_G0005137.1 mouse_genomes_project 10 85356614 85367236 + 4930463O16Rik lincRNA lincRNA MGP_129S1SvImJ_T0006138.1 MGP_129S1SvImJ_G0005137.1 mouse_genomes_project 10 85357055 85361048 + 4930463O16Rik lincRNA lincRNA MGP_129S1SvImJ_T0025131.1 MGP_129S1SvImJ_G0017197.1 mouse_genomes_project 10 42662674 42689952 - MGP_129S1SvImJ_P0025131 Qrsl1 protein_coding protein_coding MGP_129S1SvImJ_T0025132.1 MGP_129S1SvImJ_G0017197.1 mouse_genomes_project 10 42662908 42665591 - Qrsl1 protein_coding retained_intron MGP_129S1SvImJ_T0025133.1 MGP_129S1SvImJ_G0017197.1 mouse_genomes_project 10 42667890 42689952 - Qrsl1 protein_coding retained_intron MGP_129S1SvImJ_T0026315.1 MGP_129S1SvImJ_G0017512.1 mouse_genomes_project 10 81276293 81295013 - MGP_129S1SvImJ_P0026315 protein_coding protein_coding MGP_129S1SvImJ_T0026316.1 MGP_129S1SvImJ_G0017512.1 mouse_genomes_project 10 81276293 81294436 - MGP_129S1SvImJ_P0026316 protein_coding protein_coding MGP_129S1SvImJ_T0026317.1 MGP_129S1SvImJ_G0017512.1 mouse_genomes_project 10 81276299 81278316 - protein_coding retained_intron MGP_129S1SvImJ_T0026318.1 MGP_129S1SvImJ_G0017512.1 mouse_genomes_project 10 81277806 81283000 - protein_coding retained_intron MGP_129S1SvImJ_T0026319.1 MGP_129S1SvImJ_G0017512.1 mouse_genomes_project 10 81278321 81294080 - MGP_129S1SvImJ_P0026319 protein_coding protein_coding MGP_129S1SvImJ_T0026958.1 MGP_129S1SvImJ_G0017674.1 mouse_genomes_project 10 97759575 97761067 + MGP_129S1SvImJ_P0026958 Gm5426 protein_coding protein_coding MGP_129S1SvImJ_T0024695.1 MGP_129S1SvImJ_G0017040.1 mouse_genomes_project 10 16275455 16439142 - MGP_129S1SvImJ_P0024695 Arfgef3 protein_coding protein_coding MGP_129S1SvImJ_T0025928.1 MGP_129S1SvImJ_G0017408.1 mouse_genomes_project 10 78172880 78173844 - MGP_129S1SvImJ_P0025928 Gm19668 protein_coding protein_coding MGP_129S1SvImJ_T0100433.1 MGP_129S1SvImJ_G0038500.1 mouse_genomes_project 10 51029594 51029722 + Gm23906 snoRNA snoRNA MGP_129S1SvImJ_T0006107.1 MGP_129S1SvImJ_G0005113.1 mouse_genomes_project 10 38390716 38392190 - Gm26824 lincRNA lincRNA MGP_129S1SvImJ_T0025303.1 MGP_129S1SvImJ_G0017262.1 mouse_genomes_project 10 59145829 59147925 - MGP_129S1SvImJ_P0025303 Ddit4 protein_coding protein_coding MGP_129S1SvImJ_T0026309.1 MGP_129S1SvImJ_G0017509.1 mouse_genomes_project 10 81234903 81239478 + MGP_129S1SvImJ_P0026309 Adat3 protein_coding protein_coding MGP_129S1SvImJ_T0026312.1 MGP_129S1SvImJ_G0017509.1 mouse_genomes_project 10 81237858 81249656 + MGP_129S1SvImJ_P0026312 Adat3 protein_coding protein_coding MGP_129S1SvImJ_T0024907.1 MGP_129S1SvImJ_G0017122.1 mouse_genomes_project 10 29567330 29617396 - MGP_129S1SvImJ_P0024907 Tpd52l1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0024908.1 MGP_129S1SvImJ_G0017122.1 mouse_genomes_project 10 29567330 29616389 - MGP_129S1SvImJ_P0024908 Tpd52l1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0024909.1 MGP_129S1SvImJ_G0017122.1 mouse_genomes_project 10 29567340 29677344 - MGP_129S1SvImJ_P0024909 Tpd52l1 protein_coding protein_coding MGP_129S1SvImJ_T0026506.1 MGP_129S1SvImJ_G0017563.1 mouse_genomes_project 10 82228129 82233997 - Gna15 protein_coding retained_intron MGP_129S1SvImJ_T0026507.1 MGP_129S1SvImJ_G0017563.1 mouse_genomes_project 10 82228136 82250600 - MGP_129S1SvImJ_P0026507 Gna15 protein_coding protein_coding MGP_129S1SvImJ_T0026508.1 MGP_129S1SvImJ_G0017563.1 mouse_genomes_project 10 82228910 82238463 - Gna15 protein_coding retained_intron MGP_129S1SvImJ_T0009619.1 MGP_129S1SvImJ_G0007735.1 mouse_genomes_project 10 82100662 82100728 + Mir6913 miRNA miRNA MGP_129S1SvImJ_T0025450.1 MGP_129S1SvImJ_G0017299.1 mouse_genomes_project 10 61885271 61918816 - MGP_129S1SvImJ_P0025450 Vps26a protein_coding protein_coding MGP_129S1SvImJ_T0025451.1 MGP_129S1SvImJ_G0017299.1 mouse_genomes_project 10 61885271 61918609 - MGP_129S1SvImJ_P0025451 Vps26a protein_coding protein_coding MGP_129S1SvImJ_T0099179.1 MGP_129S1SvImJ_G0037246.1 mouse_genomes_project 10 53512084 53512191 - Gm26177 snRNA snRNA MGP_129S1SvImJ_T0027577.1 MGP_129S1SvImJ_G0017900.1 mouse_genomes_project 10 132999202 133000156 - MGP_129S1SvImJ_P0027577 Olfr771 protein_coding protein_coding MGP_129S1SvImJ_T0025510.1 MGP_129S1SvImJ_G0017315.1 mouse_genomes_project 10 62839118 62860514 - MGP_129S1SvImJ_P0025510 protein_coding protein_coding MGP_129S1SvImJ_T0025511.1 MGP_129S1SvImJ_G0017315.1 mouse_genomes_project 10 62839118 62857078 - MGP_129S1SvImJ_P0025511 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025512.1 MGP_129S1SvImJ_G0017315.1 mouse_genomes_project 10 62839118 62860514 - MGP_129S1SvImJ_P0025512 protein_coding protein_coding MGP_129S1SvImJ_T0025513.1 MGP_129S1SvImJ_G0017315.1 mouse_genomes_project 10 62839121 62873881 - MGP_129S1SvImJ_P0025513 protein_coding protein_coding MGP_129S1SvImJ_T0025514.1 MGP_129S1SvImJ_G0017315.1 mouse_genomes_project 10 62839169 62860517 - MGP_129S1SvImJ_P0025514 protein_coding protein_coding MGP_129S1SvImJ_T0025515.1 MGP_129S1SvImJ_G0017315.1 mouse_genomes_project 10 62842258 62845744 - protein_coding retained_intron MGP_129S1SvImJ_T0025516.1 MGP_129S1SvImJ_G0017315.1 mouse_genomes_project 10 62851507 62857078 - protein_coding retained_intron MGP_129S1SvImJ_T0009630.1 MGP_129S1SvImJ_G0007746.1 mouse_genomes_project 10 96070376 96070439 - Mir7211 miRNA miRNA MGP_129S1SvImJ_T0027047.1 MGP_129S1SvImJ_G0017712.1 mouse_genomes_project 10 110400249 110518385 + MGP_129S1SvImJ_P0027047 Ppp1r12a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0027048.1 MGP_129S1SvImJ_G0017712.1 mouse_genomes_project 10 110400249 110518667 + MGP_129S1SvImJ_P0027048 Ppp1r12a protein_coding protein_coding MGP_129S1SvImJ_T0009651.1 MGP_129S1SvImJ_G0007767.1 mouse_genomes_project 10 132110493 132110562 - Gm26308 miRNA miRNA MGP_129S1SvImJ_T0100468.1 MGP_129S1SvImJ_G0038535.1 mouse_genomes_project 10 133172716 133172850 + Gm25764 snoRNA snoRNA MGP_129S1SvImJ_T0100420.1 MGP_129S1SvImJ_G0038487.1 mouse_genomes_project 10 25576091 25576163 + Gm23353 snoRNA snoRNA MGP_129S1SvImJ_T0024931.1 MGP_129S1SvImJ_G0017137.1 mouse_genomes_project 10 32489674 32547702 - MGP_129S1SvImJ_P0024931 Dse protein_coding protein_coding MGP_129S1SvImJ_T0027491.1 MGP_129S1SvImJ_G0017861.1 mouse_genomes_project 10 132091235 132097946 - MGP_129S1SvImJ_P0027491 Coq10a protein_coding protein_coding MGP_129S1SvImJ_T0024441.1 MGP_129S1SvImJ_G0016983.1 mouse_genomes_project 10 2130852 2133636 + MGP_129S1SvImJ_P0024441 Gm10097 protein_coding protein_coding MGP_129S1SvImJ_T0098290.1 MGP_129S1SvImJ_G0036375.1 mouse_genomes_project 10 58365963 58370442 + pseudogene pseudogene MGP_129S1SvImJ_T0024804.1 MGP_129S1SvImJ_G0017085.1 mouse_genomes_project 10 21979685 21980951 + MGP_129S1SvImJ_P0024804 Taar7e protein_coding protein_coding MGP_129S1SvImJ_T0026642.1 MGP_129S1SvImJ_G0017594.1 mouse_genomes_project 10 85635300 85796768 + MGP_129S1SvImJ_P0026642 Rfx4 protein_coding protein_coding MGP_129S1SvImJ_T0026643.1 MGP_129S1SvImJ_G0017594.1 mouse_genomes_project 10 85641065 85697175 + Rfx4 protein_coding processed_transcript MGP_129S1SvImJ_T0026644.1 MGP_129S1SvImJ_G0017594.1 mouse_genomes_project 10 85641065 85697175 + Rfx4 protein_coding processed_transcript MGP_129S1SvImJ_T0026645.1 MGP_129S1SvImJ_G0017594.1 mouse_genomes_project 10 85720183 85760587 + Rfx4 protein_coding processed_transcript MGP_129S1SvImJ_T0026646.1 MGP_129S1SvImJ_G0017594.1 mouse_genomes_project 10 85720183 85796914 + MGP_129S1SvImJ_P0026646 Rfx4 protein_coding protein_coding MGP_129S1SvImJ_T0026059.1 MGP_129S1SvImJ_G0017456.1 mouse_genomes_project 10 80278271 80288648 - Polrmt protein_coding retained_intron MGP_129S1SvImJ_T0026060.1 MGP_129S1SvImJ_G0017456.1 mouse_genomes_project 10 80278275 80281518 - MGP_129S1SvImJ_P0026060 Polrmt protein_coding protein_coding MGP_129S1SvImJ_T0026061.1 MGP_129S1SvImJ_G0017456.1 mouse_genomes_project 10 80278276 80288648 - Polrmt protein_coding retained_intron MGP_129S1SvImJ_T0026062.1 MGP_129S1SvImJ_G0017456.1 mouse_genomes_project 10 80278277 80278927 - Polrmt protein_coding processed_transcript MGP_129S1SvImJ_T0026063.1 MGP_129S1SvImJ_G0017456.1 mouse_genomes_project 10 80278278 80288656 - MGP_129S1SvImJ_P0026063 Polrmt protein_coding protein_coding MGP_129S1SvImJ_T0026064.1 MGP_129S1SvImJ_G0017456.1 mouse_genomes_project 10 80278278 80288654 - MGP_129S1SvImJ_P0026064 Polrmt protein_coding protein_coding MGP_129S1SvImJ_T0026065.1 MGP_129S1SvImJ_G0017456.1 mouse_genomes_project 10 80278320 80278912 - Polrmt protein_coding retained_intron MGP_129S1SvImJ_T0026066.1 MGP_129S1SvImJ_G0017456.1 mouse_genomes_project 10 80278321 80279857 - Polrmt protein_coding retained_intron MGP_129S1SvImJ_T0026067.1 MGP_129S1SvImJ_G0017456.1 mouse_genomes_project 10 80278322 80288646 - MGP_129S1SvImJ_P0026067 Polrmt protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026068.1 MGP_129S1SvImJ_G0017456.1 mouse_genomes_project 10 80278355 80279830 - Polrmt protein_coding retained_intron MGP_129S1SvImJ_T0026069.1 MGP_129S1SvImJ_G0017456.1 mouse_genomes_project 10 80278725 80280775 - Polrmt protein_coding retained_intron MGP_129S1SvImJ_T0026070.1 MGP_129S1SvImJ_G0017456.1 mouse_genomes_project 10 80280231 80281519 - Polrmt protein_coding retained_intron MGP_129S1SvImJ_T0026071.1 MGP_129S1SvImJ_G0017456.1 mouse_genomes_project 10 80285810 80288648 - Polrmt protein_coding processed_transcript MGP_129S1SvImJ_T0025635.1 MGP_129S1SvImJ_G0017337.1 mouse_genomes_project 10 70168183 70216995 + MGP_129S1SvImJ_P0025635 Slc16a9 protein_coding protein_coding MGP_129S1SvImJ_T0025636.1 MGP_129S1SvImJ_G0017337.1 mouse_genomes_project 10 70197913 70215107 + Slc16a9 protein_coding retained_intron MGP_129S1SvImJ_T0099184.1 MGP_129S1SvImJ_G0037251.1 mouse_genomes_project 10 63869165 63869273 - Gm23854 snRNA snRNA MGP_129S1SvImJ_T0098435.1 MGP_129S1SvImJ_G0036520.1 mouse_genomes_project 10 28887980 28888074 - Gm24189 rRNA rRNA MGP_129S1SvImJ_T0026326.1 MGP_129S1SvImJ_G0017516.1 mouse_genomes_project 10 81347029 81384464 - MGP_129S1SvImJ_P0026326 Ap3d1 protein_coding protein_coding MGP_129S1SvImJ_T0006084.1 MGP_129S1SvImJ_G0005095.1 mouse_genomes_project 10 277678 280727 - Gm26752 lincRNA lincRNA MGP_129S1SvImJ_T0027515.1 MGP_129S1SvImJ_G0017870.1 mouse_genomes_project 10 132294022 132299838 - MGP_129S1SvImJ_P0027515 Zc3h10 protein_coding protein_coding MGP_129S1SvImJ_T0027516.1 MGP_129S1SvImJ_G0017870.1 mouse_genomes_project 10 132296861 132299807 - Zc3h10 protein_coding processed_transcript MGP_129S1SvImJ_T0027517.1 MGP_129S1SvImJ_G0017870.1 mouse_genomes_project 10 132297143 132299703 - Zc3h10 protein_coding processed_transcript MGP_129S1SvImJ_T0027518.1 MGP_129S1SvImJ_G0017870.1 mouse_genomes_project 10 132297401 132299789 - Zc3h10 protein_coding processed_transcript MGP_129S1SvImJ_T0024615.1 MGP_129S1SvImJ_G0017020.1 mouse_genomes_project 10 10576021 10592080 - MGP_129S1SvImJ_P0024615 Ltv1 protein_coding protein_coding MGP_129S1SvImJ_T0100434.1 MGP_129S1SvImJ_G0038501.1 mouse_genomes_project 10 57827973 57828049 - Gm25055 snoRNA snoRNA MGP_129S1SvImJ_T0003035.1 MGP_129S1SvImJ_G0002843.1 mouse_genomes_project 10 19864093 19868518 + antisense antisense MGP_129S1SvImJ_T0025631.1 MGP_129S1SvImJ_G0017336.1 mouse_genomes_project 10 70005192 70111895 + MGP_129S1SvImJ_P0025631 Ccdc6 protein_coding protein_coding MGP_129S1SvImJ_T0025632.1 MGP_129S1SvImJ_G0017336.1 mouse_genomes_project 10 70091591 70100905 + Ccdc6 protein_coding retained_intron MGP_129S1SvImJ_T0025633.1 MGP_129S1SvImJ_G0017336.1 mouse_genomes_project 10 70092093 70106872 + MGP_129S1SvImJ_P0025633 Ccdc6 protein_coding protein_coding MGP_129S1SvImJ_T0025634.1 MGP_129S1SvImJ_G0017336.1 mouse_genomes_project 10 70092129 70106886 + MGP_129S1SvImJ_P0025634 Ccdc6 protein_coding protein_coding MGP_129S1SvImJ_T0025674.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73169840 74447642 + Pcdh15 protein_coding retained_intron MGP_129S1SvImJ_T0025675.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73169933 73820061 + Pcdh15 protein_coding retained_intron MGP_129S1SvImJ_T0025676.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73169951 73575112 + Pcdh15 protein_coding retained_intron MGP_129S1SvImJ_T0025677.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929437 74764120 + MGP_129S1SvImJ_P0025677 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025678.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929437 74773735 + MGP_129S1SvImJ_P0025678 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025679.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74762017 + MGP_129S1SvImJ_P0025679 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025680.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74774085 + MGP_129S1SvImJ_P0025680 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025681.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74774085 + MGP_129S1SvImJ_P0025681 Pcdh15 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025682.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74775672 + MGP_129S1SvImJ_P0025682 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025683.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74762017 + MGP_129S1SvImJ_P0025683 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025684.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74761889 + MGP_129S1SvImJ_P0025684 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025685.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74775672 + MGP_129S1SvImJ_P0025685 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025686.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74762017 + MGP_129S1SvImJ_P0025686 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025687.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74774085 + MGP_129S1SvImJ_P0025687 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025688.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74774085 + MGP_129S1SvImJ_P0025688 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025689.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74762017 + MGP_129S1SvImJ_P0025689 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025690.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74774085 + MGP_129S1SvImJ_P0025690 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025691.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74774085 + MGP_129S1SvImJ_P0025691 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025692.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74774085 + MGP_129S1SvImJ_P0025692 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025693.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74762017 + MGP_129S1SvImJ_P0025693 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025694.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74779095 + MGP_129S1SvImJ_P0025694 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025695.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74762017 + MGP_129S1SvImJ_P0025695 Pcdh15 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025696.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74762017 + MGP_129S1SvImJ_P0025696 Pcdh15 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025697.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74774085 + MGP_129S1SvImJ_P0025697 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025698.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74762017 + MGP_129S1SvImJ_P0025698 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025699.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74762017 + MGP_129S1SvImJ_P0025699 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025700.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74775836 + MGP_129S1SvImJ_P0025700 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025701.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929453 74762951 + MGP_129S1SvImJ_P0025701 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025702.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929513 74635169 + MGP_129S1SvImJ_P0025702 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025703.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929513 74635169 + MGP_129S1SvImJ_P0025703 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025704.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 73929513 74635169 + MGP_129S1SvImJ_P0025704 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025705.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 74052705 74775430 + MGP_129S1SvImJ_P0025705 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025706.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 74052705 74773576 + MGP_129S1SvImJ_P0025706 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025707.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 74052705 74775526 + MGP_129S1SvImJ_P0025707 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025708.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 74432477 74465784 + Pcdh15 protein_coding processed_transcript MGP_129S1SvImJ_T0025709.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 74485833 74762020 + MGP_129S1SvImJ_P0025709 Pcdh15 protein_coding protein_coding MGP_129S1SvImJ_T0025710.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 74519895 74530820 + Pcdh15 protein_coding retained_intron MGP_129S1SvImJ_T0025711.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 74717029 74753969 + Pcdh15 protein_coding retained_intron MGP_129S1SvImJ_T0025712.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 74760264 74775572 + Pcdh15 protein_coding processed_transcript MGP_129S1SvImJ_T0025713.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 74760761 74766035 + Pcdh15 protein_coding retained_intron MGP_129S1SvImJ_T0025714.1 MGP_129S1SvImJ_G0017347.1 mouse_genomes_project 10 74761186 74771722 + Pcdh15 protein_coding processed_transcript MGP_129S1SvImJ_T0003103.1 MGP_129S1SvImJ_G0002896.1 mouse_genomes_project 10 113149971 113259796 - 1700020G17Rik antisense antisense MGP_129S1SvImJ_T0003104.1 MGP_129S1SvImJ_G0002896.1 mouse_genomes_project 10 113166565 113259826 - 1700020G17Rik antisense antisense MGP_129S1SvImJ_T0003105.1 MGP_129S1SvImJ_G0002896.1 mouse_genomes_project 10 113178192 113259858 - 1700020G17Rik antisense antisense MGP_129S1SvImJ_T0003106.1 MGP_129S1SvImJ_G0002896.1 mouse_genomes_project 10 113202771 113259845 - 1700020G17Rik antisense antisense MGP_129S1SvImJ_T0025151.1 MGP_129S1SvImJ_G0017208.1 mouse_genomes_project 10 44234724 44271312 + MGP_129S1SvImJ_P0025151 Bves protein_coding unknown_likely_coding MGP_129S1SvImJ_T0100466.1 MGP_129S1SvImJ_G0038533.1 mouse_genomes_project 10 131761922 131761994 + Mir677 snoRNA snoRNA MGP_129S1SvImJ_T0098288.1 MGP_129S1SvImJ_G0036373.1 mouse_genomes_project 10 42800311 42800859 + pseudogene pseudogene MGP_129S1SvImJ_T0025650.1 MGP_129S1SvImJ_G0017341.1 mouse_genomes_project 10 70875105 71129523 - MGP_129S1SvImJ_P0025650 Bicc1 protein_coding protein_coding MGP_129S1SvImJ_T0025651.1 MGP_129S1SvImJ_G0017341.1 mouse_genomes_project 10 70880031 71129439 - MGP_129S1SvImJ_P0025651 Bicc1 protein_coding protein_coding MGP_129S1SvImJ_T0025652.1 MGP_129S1SvImJ_G0017341.1 mouse_genomes_project 10 70886362 70900348 - Bicc1 protein_coding retained_intron MGP_129S1SvImJ_T0027420.1 MGP_129S1SvImJ_G0017838.1 mouse_genomes_project 10 131429327 131449915 + MGP_129S1SvImJ_P0027420 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027421.1 MGP_129S1SvImJ_G0017838.1 mouse_genomes_project 10 131429328 131491456 + MGP_129S1SvImJ_P0027421 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027423.1 MGP_129S1SvImJ_G0017838.1 mouse_genomes_project 10 131429373 131448984 + MGP_129S1SvImJ_P0027423 protein_coding protein_coding MGP_129S1SvImJ_T0024531.1 MGP_129S1SvImJ_G0017000.1 mouse_genomes_project 10 5019135 5050649 + MGP_129S1SvImJ_P0024531 Ppil4 protein_coding protein_coding MGP_129S1SvImJ_T0024532.1 MGP_129S1SvImJ_G0017000.1 mouse_genomes_project 10 5019152 5034896 + Ppil4 protein_coding retained_intron MGP_129S1SvImJ_T0024533.1 MGP_129S1SvImJ_G0017000.1 mouse_genomes_project 10 5019165 5040395 + MGP_129S1SvImJ_P0024533 Ppil4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024534.1 MGP_129S1SvImJ_G0017000.1 mouse_genomes_project 10 5027142 5032926 + Ppil4 protein_coding retained_intron MGP_129S1SvImJ_T0025440.1 MGP_129S1SvImJ_G0017296.1 mouse_genomes_project 10 61810245 61851458 - MGP_129S1SvImJ_P0025440 Hkdc1 protein_coding protein_coding MGP_129S1SvImJ_T0025441.1 MGP_129S1SvImJ_G0017296.1 mouse_genomes_project 10 61822844 61828047 - Hkdc1 protein_coding retained_intron MGP_129S1SvImJ_T0025442.1 MGP_129S1SvImJ_G0017296.1 mouse_genomes_project 10 61838802 61840818 - Hkdc1 protein_coding retained_intron MGP_129S1SvImJ_T0025443.1 MGP_129S1SvImJ_G0017296.1 mouse_genomes_project 10 61845349 61851375 - Hkdc1 protein_coding retained_intron MGP_129S1SvImJ_T0006172.1 MGP_129S1SvImJ_G0005156.1 mouse_genomes_project 10 115277006 115338192 + 1700010J16Rik lincRNA lincRNA MGP_129S1SvImJ_T0006173.1 MGP_129S1SvImJ_G0005156.1 mouse_genomes_project 10 115277044 115338195 + 1700010J16Rik lincRNA lincRNA MGP_129S1SvImJ_T0012440.1 MGP_129S1SvImJ_G0010529.1 mouse_genomes_project 10 73282534 73283606 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009599.1 MGP_129S1SvImJ_G0007715.1 mouse_genomes_project 10 60430974 60431073 - Gm44308 miRNA miRNA MGP_129S1SvImJ_T0012438.1 MGP_129S1SvImJ_G0010527.1 mouse_genomes_project 10 67014437 67034002 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099173.1 MGP_129S1SvImJ_G0037240.1 mouse_genomes_project 10 44141025 44141088 + Gm27723 snRNA snRNA MGP_129S1SvImJ_T0100444.1 MGP_129S1SvImJ_G0038511.1 mouse_genomes_project 10 78315244 78315298 - Gm22871 snoRNA snoRNA MGP_129S1SvImJ_T0024998.1 MGP_129S1SvImJ_G0017157.1 mouse_genomes_project 10 38499423 38530455 - MGP_129S1SvImJ_P0024998 protein_coding protein_coding MGP_129S1SvImJ_T0024999.1 MGP_129S1SvImJ_G0017157.1 mouse_genomes_project 10 38510561 38530458 - MGP_129S1SvImJ_P0024999 protein_coding protein_coding MGP_129S1SvImJ_T0025000.1 MGP_129S1SvImJ_G0017157.1 mouse_genomes_project 10 38515515 38530452 - MGP_129S1SvImJ_P0025000 protein_coding protein_coding MGP_129S1SvImJ_T0025001.1 MGP_129S1SvImJ_G0017157.1 mouse_genomes_project 10 38516490 38517144 - MGP_129S1SvImJ_P0025001 protein_coding protein_coding MGP_129S1SvImJ_T0026052.1 MGP_129S1SvImJ_G0017453.1 mouse_genomes_project 10 80227711 80236060 + MGP_129S1SvImJ_P0026052 Gzmm protein_coding protein_coding MGP_129S1SvImJ_T0026053.1 MGP_129S1SvImJ_G0017453.1 mouse_genomes_project 10 80234556 80236059 + Gzmm protein_coding processed_transcript MGP_129S1SvImJ_T0026684.1 MGP_129S1SvImJ_G0017609.1 mouse_genomes_project 10 87129701 87149059 + MGP_129S1SvImJ_P0026684 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0012422.1 MGP_129S1SvImJ_G0010511.1 mouse_genomes_project 10 41142043 41142220 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098802.1 MGP_129S1SvImJ_G0036886.1 mouse_genomes_project 10 81218788 81220617 - Gm29093 sense_intronic sense_intronic MGP_129S1SvImJ_T0025383.1 MGP_129S1SvImJ_G0017283.1 mouse_genomes_project 10 60953743 60988120 + MGP_129S1SvImJ_P0025383 Npffr1 protein_coding protein_coding MGP_129S1SvImJ_T0026125.1 MGP_129S1SvImJ_G0017470.1 mouse_genomes_project 10 80474109 80474394 + MGP_129S1SvImJ_P0026125 Gm26602 protein_coding protein_coding MGP_129S1SvImJ_T0011306.1 MGP_129S1SvImJ_G0009422.1 mouse_genomes_project 10 111369751 111370029 - Gm22097 misc_RNA misc_RNA MGP_129S1SvImJ_T0027385.1 MGP_129S1SvImJ_G0017826.1 mouse_genomes_project 10 131145598 131156154 - MGP_129S1SvImJ_P0027385 Nxph4 protein_coding protein_coding MGP_129S1SvImJ_T0027072.1 MGP_129S1SvImJ_G0017718.1 mouse_genomes_project 10 113308785 113377051 - MGP_129S1SvImJ_P0027072 Zdhhc17 protein_coding protein_coding MGP_129S1SvImJ_T0027073.1 MGP_129S1SvImJ_G0017718.1 mouse_genomes_project 10 113329681 113376988 - MGP_129S1SvImJ_P0027073 Zdhhc17 protein_coding protein_coding MGP_129S1SvImJ_T0025285.1 MGP_129S1SvImJ_G0017259.1 mouse_genomes_project 10 58792556 58792892 + MGP_129S1SvImJ_P0025285 Gm10322 protein_coding protein_coding MGP_129S1SvImJ_T0027242.1 MGP_129S1SvImJ_G0017779.1 mouse_genomes_project 10 124262780 124334962 + MGP_129S1SvImJ_P0027242 Wif1 protein_coding protein_coding MGP_129S1SvImJ_T0027243.1 MGP_129S1SvImJ_G0017779.1 mouse_genomes_project 10 124262844 124334958 + MGP_129S1SvImJ_P0027243 Wif1 protein_coding protein_coding MGP_129S1SvImJ_T0027244.1 MGP_129S1SvImJ_G0017779.1 mouse_genomes_project 10 124317492 124334949 + Wif1 protein_coding retained_intron MGP_129S1SvImJ_T0025354.1 MGP_129S1SvImJ_G0017274.1 mouse_genomes_project 10 60400166 60456133 - MGP_129S1SvImJ_P0025354 Sgpl1 protein_coding protein_coding MGP_129S1SvImJ_T0025355.1 MGP_129S1SvImJ_G0017274.1 mouse_genomes_project 10 60400166 60456103 - MGP_129S1SvImJ_P0025355 Sgpl1 protein_coding protein_coding MGP_129S1SvImJ_T0025356.1 MGP_129S1SvImJ_G0017274.1 mouse_genomes_project 10 60400169 60456103 - MGP_129S1SvImJ_P0025356 Sgpl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025357.1 MGP_129S1SvImJ_G0017274.1 mouse_genomes_project 10 60402349 60404650 - Sgpl1 protein_coding retained_intron MGP_129S1SvImJ_T0025358.1 MGP_129S1SvImJ_G0017274.1 mouse_genomes_project 10 60405719 60407002 - Sgpl1 protein_coding retained_intron MGP_129S1SvImJ_T0025359.1 MGP_129S1SvImJ_G0017274.1 mouse_genomes_project 10 60414964 60456162 - MGP_129S1SvImJ_P0025359 Sgpl1 protein_coding protein_coding MGP_129S1SvImJ_T0025360.1 MGP_129S1SvImJ_G0017274.1 mouse_genomes_project 10 60416878 60456135 - MGP_129S1SvImJ_P0025360 Sgpl1 protein_coding protein_coding MGP_129S1SvImJ_T0025361.1 MGP_129S1SvImJ_G0017274.1 mouse_genomes_project 10 60423289 60456111 - Sgpl1 protein_coding processed_transcript MGP_129S1SvImJ_T0025362.1 MGP_129S1SvImJ_G0017274.1 mouse_genomes_project 10 60429164 60455289 - MGP_129S1SvImJ_P0025362 Sgpl1 protein_coding protein_coding MGP_129S1SvImJ_T0025363.1 MGP_129S1SvImJ_G0017274.1 mouse_genomes_project 10 60454285 60456063 - Sgpl1 protein_coding retained_intron MGP_129S1SvImJ_T0027076.1 MGP_129S1SvImJ_G0017721.1 mouse_genomes_project 10 113890132 113918302 + MGP_129S1SvImJ_P0027076 Nap1l1 protein_coding protein_coding MGP_129S1SvImJ_T0027077.1 MGP_129S1SvImJ_G0017721.1 mouse_genomes_project 10 113897552 113919558 + MGP_129S1SvImJ_P0027077 Nap1l1 protein_coding protein_coding MGP_129S1SvImJ_T0027594.1 MGP_129S1SvImJ_G0017914.1 mouse_genomes_project 10 133376685 133377654 + MGP_129S1SvImJ_P0027594 Olfr790 protein_coding protein_coding MGP_129S1SvImJ_T0006169.1 MGP_129S1SvImJ_G0005153.1 mouse_genomes_project 10 108565521 108569346 - C230021G24Rik lincRNA lincRNA MGP_129S1SvImJ_T0025218.1 MGP_129S1SvImJ_G0017234.1 mouse_genomes_project 10 55314907 55535872 - MGP_129S1SvImJ_P0025218 Tbc1d32 protein_coding protein_coding MGP_129S1SvImJ_T0099171.1 MGP_129S1SvImJ_G0037238.1 mouse_genomes_project 10 43457463 43457551 - Gm22087 snRNA snRNA MGP_129S1SvImJ_T0100425.1 MGP_129S1SvImJ_G0038492.1 mouse_genomes_project 10 36705362 36705430 + Gm24297 snoRNA snoRNA MGP_129S1SvImJ_T0024923.1 MGP_129S1SvImJ_G0017130.1 mouse_genomes_project 10 32254705 32280122 - MGP_129S1SvImJ_P0024923 Zufsp protein_coding protein_coding MGP_129S1SvImJ_T0024847.1 MGP_129S1SvImJ_G0017101.1 mouse_genomes_project 10 24123306 24124499 + MGP_129S1SvImJ_P0024847 Gm9767 protein_coding protein_coding MGP_129S1SvImJ_T0027104.1 MGP_129S1SvImJ_G0017735.1 mouse_genomes_project 10 117987902 118013630 - MGP_129S1SvImJ_P0027104 Rab21 protein_coding protein_coding MGP_129S1SvImJ_T0100405.1 MGP_129S1SvImJ_G0038472.1 mouse_genomes_project 10 5078414 5078535 - Gm24726 snoRNA snoRNA MGP_129S1SvImJ_T0009641.1 MGP_129S1SvImJ_G0007757.1 mouse_genomes_project 10 124906318 124906394 - Gm24330 miRNA miRNA MGP_129S1SvImJ_T0006128.1 MGP_129S1SvImJ_G0005130.1 mouse_genomes_project 10 73282238 73404115 - Gm15398 lincRNA lincRNA MGP_129S1SvImJ_T0025172.1 MGP_129S1SvImJ_G0017214.1 mouse_genomes_project 10 50602728 50614812 + MGP_129S1SvImJ_P0025172 Lilr4b protein_coding protein_coding MGP_129S1SvImJ_T0025173.1 MGP_129S1SvImJ_G0017214.1 mouse_genomes_project 10 50602774 50613853 + Lilr4b protein_coding processed_transcript MGP_129S1SvImJ_T0100429.1 MGP_129S1SvImJ_G0038496.1 mouse_genomes_project 10 39856856 39856988 + Gm25526 snoRNA snoRNA MGP_129S1SvImJ_T0011288.1 MGP_129S1SvImJ_G0009404.1 mouse_genomes_project 10 39494469 39494712 - Gm22948 misc_RNA misc_RNA MGP_129S1SvImJ_T0024929.1 MGP_129S1SvImJ_G0017135.1 mouse_genomes_project 10 32427450 32432618 - MGP_129S1SvImJ_P0024929 Fam26e protein_coding protein_coding MGP_129S1SvImJ_T0024536.1 MGP_129S1SvImJ_G0017002.1 mouse_genomes_project 10 5134517 5153738 - MGP_129S1SvImJ_P0024536 Tab2 protein_coding protein_coding MGP_129S1SvImJ_T0024537.1 MGP_129S1SvImJ_G0017002.1 mouse_genomes_project 10 5136193 5139365 - Tab2 protein_coding retained_intron MGP_129S1SvImJ_T0024538.1 MGP_129S1SvImJ_G0017002.1 mouse_genomes_project 10 5136303 5140351 - Tab2 protein_coding retained_intron MGP_129S1SvImJ_T0024539.1 MGP_129S1SvImJ_G0017002.1 mouse_genomes_project 10 5140356 5162074 - MGP_129S1SvImJ_P0024539 Tab2 protein_coding protein_coding MGP_129S1SvImJ_T0024540.1 MGP_129S1SvImJ_G0017002.1 mouse_genomes_project 10 5148203 5153126 - MGP_129S1SvImJ_P0024540 Tab2 protein_coding protein_coding MGP_129S1SvImJ_T0000848.1 MGP_129S1SvImJ_G0000782.1 mouse_genomes_project 10 88298950 88301288 + TEC TEC MGP_129S1SvImJ_T0000849.1 MGP_129S1SvImJ_G0000782.1 mouse_genomes_project 10 88300193 88300571 + TEC TEC MGP_129S1SvImJ_T0027641.1 MGP_129S1SvImJ_G0017947.1 mouse_genomes_project 10 134160163 134161221 - MGP_129S1SvImJ_P0027641 Olfr827 protein_coding protein_coding MGP_129S1SvImJ_T0025017.1 MGP_129S1SvImJ_G0017165.1 mouse_genomes_project 10 39227236 39251901 + MGP_129S1SvImJ_P0025017 Ddo protein_coding protein_coding MGP_129S1SvImJ_T0000853.1 MGP_129S1SvImJ_G0000786.1 mouse_genomes_project 10 109619413 109620352 - TEC TEC MGP_129S1SvImJ_T0027269.1 MGP_129S1SvImJ_G0017789.1 mouse_genomes_project 10 125745136 125750095 + MGP_129S1SvImJ_P0027269 Avpr1a protein_coding protein_coding MGP_129S1SvImJ_T0027628.1 MGP_129S1SvImJ_G0017936.1 mouse_genomes_project 10 133794810 133795761 - MGP_129S1SvImJ_P0027628 protein_coding protein_coding MGP_129S1SvImJ_T0024565.1 MGP_129S1SvImJ_G0017011.1 mouse_genomes_project 10 8048757 8452053 - MGP_129S1SvImJ_P0024565 Grm1 protein_coding protein_coding MGP_129S1SvImJ_T0024566.1 MGP_129S1SvImJ_G0017011.1 mouse_genomes_project 10 8051286 8452002 - MGP_129S1SvImJ_P0024566 Grm1 protein_coding protein_coding MGP_129S1SvImJ_T0024567.1 MGP_129S1SvImJ_G0017011.1 mouse_genomes_project 10 8051504 8450659 - MGP_129S1SvImJ_P0024567 Grm1 protein_coding protein_coding MGP_129S1SvImJ_T0024568.1 MGP_129S1SvImJ_G0017011.1 mouse_genomes_project 10 8052151 8084240 - Grm1 protein_coding processed_transcript MGP_129S1SvImJ_T0024569.1 MGP_129S1SvImJ_G0017011.1 mouse_genomes_project 10 8115307 8117934 - Grm1 protein_coding processed_transcript MGP_129S1SvImJ_T0024570.1 MGP_129S1SvImJ_G0017011.1 mouse_genomes_project 10 8450191 8451947 - Grm1 protein_coding processed_transcript MGP_129S1SvImJ_T0025787.1 MGP_129S1SvImJ_G0017365.1 mouse_genomes_project 10 75969410 75987177 - MGP_129S1SvImJ_P0025787 Gstt1 protein_coding protein_coding MGP_129S1SvImJ_T0025788.1 MGP_129S1SvImJ_G0017365.1 mouse_genomes_project 10 75969581 75986180 - MGP_129S1SvImJ_P0025788 Gstt1 protein_coding protein_coding MGP_129S1SvImJ_T0025789.1 MGP_129S1SvImJ_G0017365.1 mouse_genomes_project 10 75972392 75986324 - MGP_129S1SvImJ_P0025789 Gstt1 protein_coding protein_coding MGP_129S1SvImJ_T0027320.1 MGP_129S1SvImJ_G0017806.1 mouse_genomes_project 10 130656432 130674090 + MGP_129S1SvImJ_P0027320 Agap2 protein_coding protein_coding MGP_129S1SvImJ_T0027466.1 MGP_129S1SvImJ_G0017851.1 mouse_genomes_project 10 131914439 131916328 - MGP_129S1SvImJ_P0027466 Spryd4 protein_coding protein_coding MGP_129S1SvImJ_T0025543.1 MGP_129S1SvImJ_G0017324.1 mouse_genomes_project 10 67299226 67305338 + MGP_129S1SvImJ_P0025543 Egr2 protein_coding protein_coding MGP_129S1SvImJ_T0025544.1 MGP_129S1SvImJ_G0017324.1 mouse_genomes_project 10 67299334 67305473 + MGP_129S1SvImJ_P0025544 Egr2 protein_coding protein_coding MGP_129S1SvImJ_T0025545.1 MGP_129S1SvImJ_G0017324.1 mouse_genomes_project 10 67302970 67307280 + MGP_129S1SvImJ_P0025545 Egr2 protein_coding protein_coding MGP_129S1SvImJ_T0025546.1 MGP_129S1SvImJ_G0017324.1 mouse_genomes_project 10 67302971 67307280 + MGP_129S1SvImJ_P0025546 Egr2 protein_coding protein_coding MGP_129S1SvImJ_T0025547.1 MGP_129S1SvImJ_G0017324.1 mouse_genomes_project 10 67302971 67303482 + MGP_129S1SvImJ_P0025547 Egr2 protein_coding protein_coding MGP_129S1SvImJ_T0025548.1 MGP_129S1SvImJ_G0017324.1 mouse_genomes_project 10 67303031 67305033 + MGP_129S1SvImJ_P0025548 Egr2 protein_coding protein_coding MGP_129S1SvImJ_T0025549.1 MGP_129S1SvImJ_G0017324.1 mouse_genomes_project 10 67303784 67307280 + MGP_129S1SvImJ_P0025549 Egr2 protein_coding protein_coding MGP_129S1SvImJ_T0099182.1 MGP_129S1SvImJ_G0037249.1 mouse_genomes_project 10 57441709 57441816 - Gm23058 snRNA snRNA MGP_129S1SvImJ_T0024455.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3882081 4123302 + MGP_129S1SvImJ_P0024455 Oprm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024456.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3882081 4191785 + MGP_129S1SvImJ_P0024456 Oprm1 protein_coding protein_coding MGP_129S1SvImJ_T0024457.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3882168 4192130 + MGP_129S1SvImJ_P0024457 Oprm1 protein_coding protein_coding MGP_129S1SvImJ_T0024458.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3882168 3949870 + MGP_129S1SvImJ_P0024458 Oprm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024459.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3882168 3972669 + MGP_129S1SvImJ_P0024459 Oprm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024460.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3882168 3973422 + MGP_129S1SvImJ_P0024460 Oprm1 protein_coding protein_coding MGP_129S1SvImJ_T0024461.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3882168 3972669 + MGP_129S1SvImJ_P0024461 Oprm1 protein_coding protein_coding MGP_129S1SvImJ_T0024462.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3882168 3972669 + MGP_129S1SvImJ_P0024462 Oprm1 protein_coding protein_coding MGP_129S1SvImJ_T0024463.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3882168 3972669 + MGP_129S1SvImJ_P0024463 Oprm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024464.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3909784 3973159 + MGP_129S1SvImJ_P0024464 Oprm1 protein_coding protein_coding MGP_129S1SvImJ_T0024465.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3909877 4191761 + MGP_129S1SvImJ_P0024465 Oprm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024466.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3909992 3951544 + MGP_129S1SvImJ_P0024466 Oprm1 protein_coding protein_coding MGP_129S1SvImJ_T0024467.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3909992 3963199 + MGP_129S1SvImJ_P0024467 Oprm1 protein_coding protein_coding MGP_129S1SvImJ_T0024468.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3909992 3963356 + MGP_129S1SvImJ_P0024468 Oprm1 protein_coding protein_coding MGP_129S1SvImJ_T0024469.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3909992 4191785 + MGP_129S1SvImJ_P0024469 Oprm1 protein_coding protein_coding MGP_129S1SvImJ_T0024470.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3909992 3954870 + MGP_129S1SvImJ_P0024470 Oprm1 protein_coding protein_coding MGP_129S1SvImJ_T0024471.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3909992 4192066 + MGP_129S1SvImJ_P0024471 Oprm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024472.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3909992 4123362 + MGP_129S1SvImJ_P0024472 Oprm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024473.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3909992 3960495 + MGP_129S1SvImJ_P0024473 Oprm1 protein_coding protein_coding MGP_129S1SvImJ_T0024474.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3909992 4192046 + MGP_129S1SvImJ_P0024474 Oprm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024475.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3909992 4123352 + MGP_129S1SvImJ_P0024475 Oprm1 protein_coding protein_coding MGP_129S1SvImJ_T0024476.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3909992 3961734 + MGP_129S1SvImJ_P0024476 Oprm1 protein_coding protein_coding MGP_129S1SvImJ_T0024477.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3909992 4192774 + MGP_129S1SvImJ_P0024477 Oprm1 protein_coding protein_coding MGP_129S1SvImJ_T0024478.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3909992 4191782 + MGP_129S1SvImJ_P0024478 Oprm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024479.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3909992 4191761 + MGP_129S1SvImJ_P0024479 Oprm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024480.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3909992 3963181 + MGP_129S1SvImJ_P0024480 Oprm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024481.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3910020 3961769 + MGP_129S1SvImJ_P0024481 Oprm1 protein_coding protein_coding MGP_129S1SvImJ_T0024482.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3910020 3954676 + MGP_129S1SvImJ_P0024482 Oprm1 protein_coding protein_coding MGP_129S1SvImJ_T0024483.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3910158 4192066 + Oprm1 protein_coding processed_transcript MGP_129S1SvImJ_T0024484.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3910208 3949817 + Oprm1 protein_coding processed_transcript MGP_129S1SvImJ_T0024485.1 MGP_129S1SvImJ_G0016990.1 mouse_genomes_project 10 3910282 3972798 + Oprm1 protein_coding processed_transcript MGP_129S1SvImJ_T0027098.1 MGP_129S1SvImJ_G0017732.1 mouse_genomes_project 10 117048660 117464443 - MGP_129S1SvImJ_P0027098 Trhde protein_coding protein_coding MGP_129S1SvImJ_T0027099.1 MGP_129S1SvImJ_G0017732.1 mouse_genomes_project 10 117216923 117465327 - Trhde protein_coding retained_intron MGP_129S1SvImJ_T0027100.1 MGP_129S1SvImJ_G0017732.1 mouse_genomes_project 10 117450590 117464390 - Trhde protein_coding retained_intron MGP_129S1SvImJ_T0027288.1 MGP_129S1SvImJ_G0017797.1 mouse_genomes_project 10 130546119 130571794 + MGP_129S1SvImJ_P0027288 Ctdsp2 protein_coding protein_coding MGP_129S1SvImJ_T0027289.1 MGP_129S1SvImJ_G0017797.1 mouse_genomes_project 10 130546748 130571792 + MGP_129S1SvImJ_P0027289 Ctdsp2 protein_coding protein_coding MGP_129S1SvImJ_T0099181.1 MGP_129S1SvImJ_G0037248.1 mouse_genomes_project 10 56515515 56515615 + Gm24285 snRNA snRNA MGP_129S1SvImJ_T0009618.1 MGP_129S1SvImJ_G0007734.1 mouse_genomes_project 10 81979227 81979318 + Mir3057 miRNA miRNA MGP_129S1SvImJ_T0025653.1 MGP_129S1SvImJ_G0017342.1 mouse_genomes_project 10 71211806 71224187 - MGP_129S1SvImJ_P0025653 Tfam protein_coding protein_coding MGP_129S1SvImJ_T0025654.1 MGP_129S1SvImJ_G0017342.1 mouse_genomes_project 10 71214793 71221568 - Tfam protein_coding processed_transcript MGP_129S1SvImJ_T0025655.1 MGP_129S1SvImJ_G0017342.1 mouse_genomes_project 10 71214804 71224527 - MGP_129S1SvImJ_P0025655 Tfam protein_coding protein_coding MGP_129S1SvImJ_T0025656.1 MGP_129S1SvImJ_G0017342.1 mouse_genomes_project 10 71215463 71223289 - MGP_129S1SvImJ_P0025656 Tfam protein_coding protein_coding MGP_129S1SvImJ_T0024798.1 MGP_129S1SvImJ_G0017079.1 mouse_genomes_project 10 21896612 21897656 + MGP_129S1SvImJ_P0024798 Taar4 protein_coding protein_coding MGP_129S1SvImJ_T0024911.1 MGP_129S1SvImJ_G0017124.1 mouse_genomes_project 10 29909912 31164435 - MGP_129S1SvImJ_P0024911 Nkain2 protein_coding protein_coding MGP_129S1SvImJ_T0024912.1 MGP_129S1SvImJ_G0017124.1 mouse_genomes_project 10 30576266 30660856 - MGP_129S1SvImJ_P0024912 Nkain2 protein_coding protein_coding MGP_129S1SvImJ_T0024913.1 MGP_129S1SvImJ_G0017124.1 mouse_genomes_project 10 31163878 31164436 - MGP_129S1SvImJ_P0024913 Nkain2 protein_coding protein_coding MGP_129S1SvImJ_T0003125.1 MGP_129S1SvImJ_G0002910.1 mouse_genomes_project 10 131297306 131302583 - Gm16230 antisense antisense MGP_129S1SvImJ_T0025174.1 MGP_129S1SvImJ_G0017215.1 mouse_genomes_project 10 50602777 50614828 + MGP_129S1SvImJ_P0025174 Lilrb4a protein_coding protein_coding MGP_129S1SvImJ_T0025139.1 MGP_129S1SvImJ_G0017201.1 mouse_genomes_project 10 43042467 43069874 + MGP_129S1SvImJ_P0025139 protein_coding protein_coding MGP_129S1SvImJ_T0024879.1 MGP_129S1SvImJ_G0017109.1 mouse_genomes_project 10 27316280 27317193 - MGP_129S1SvImJ_P0024879 Gm9996 protein_coding protein_coding MGP_129S1SvImJ_T0025835.1 MGP_129S1SvImJ_G0017384.1 mouse_genomes_project 10 76712836 76768178 + MGP_129S1SvImJ_P0025835 Mcm3ap protein_coding protein_coding MGP_129S1SvImJ_T0026984.1 MGP_129S1SvImJ_G0017690.1 mouse_genomes_project 10 102310284 102352329 - MGP_129S1SvImJ_P0026984 Tmtc3 protein_coding protein_coding MGP_129S1SvImJ_T0026985.1 MGP_129S1SvImJ_G0017690.1 mouse_genomes_project 10 102339418 102352321 - Tmtc3 protein_coding retained_intron MGP_129S1SvImJ_T0026986.1 MGP_129S1SvImJ_G0017690.1 mouse_genomes_project 10 102340637 102352249 - MGP_129S1SvImJ_P0026986 Tmtc3 protein_coding protein_coding MGP_129S1SvImJ_T0026987.1 MGP_129S1SvImJ_G0017690.1 mouse_genomes_project 10 102341973 102352308 - MGP_129S1SvImJ_P0026987 Tmtc3 protein_coding protein_coding MGP_129S1SvImJ_T0100412.1 MGP_129S1SvImJ_G0038479.1 mouse_genomes_project 10 9730432 9730642 + Gm25139 snoRNA snoRNA MGP_129S1SvImJ_T0012448.1 MGP_129S1SvImJ_G0010537.1 mouse_genomes_project 10 82230296 82230590 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0026666.1 MGP_129S1SvImJ_G0017603.1 mouse_genomes_project 10 86829090 86853981 - MGP_129S1SvImJ_P0026666 Prdm4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0026667.1 MGP_129S1SvImJ_G0017603.1 mouse_genomes_project 10 86829090 86854104 - MGP_129S1SvImJ_P0026667 Prdm4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0026668.1 MGP_129S1SvImJ_G0017603.1 mouse_genomes_project 10 86829099 86853992 - MGP_129S1SvImJ_P0026668 Prdm4 protein_coding protein_coding MGP_129S1SvImJ_T0025049.1 MGP_129S1SvImJ_G0017175.1 mouse_genomes_project 10 40132328 40156085 + MGP_129S1SvImJ_P0025049 Ppil6 protein_coding protein_coding MGP_129S1SvImJ_T0026210.1 MGP_129S1SvImJ_G0017488.1 mouse_genomes_project 10 80766610 80777205 + MGP_129S1SvImJ_P0026210 Efna2 protein_coding protein_coding MGP_129S1SvImJ_T0024942.1 MGP_129S1SvImJ_G0017143.1 mouse_genomes_project 10 34915281 35258664 + MGP_129S1SvImJ_P0024942 Hs3st5 protein_coding protein_coding MGP_129S1SvImJ_T0024943.1 MGP_129S1SvImJ_G0017143.1 mouse_genomes_project 10 34915286 35259280 + MGP_129S1SvImJ_P0024943 Hs3st5 protein_coding protein_coding MGP_129S1SvImJ_T0024944.1 MGP_129S1SvImJ_G0017143.1 mouse_genomes_project 10 34915356 35123463 + Hs3st5 protein_coding retained_intron MGP_129S1SvImJ_T0024945.1 MGP_129S1SvImJ_G0017143.1 mouse_genomes_project 10 34915493 35259288 + MGP_129S1SvImJ_P0024945 Hs3st5 protein_coding protein_coding MGP_129S1SvImJ_T0024946.1 MGP_129S1SvImJ_G0017143.1 mouse_genomes_project 10 34915874 35227531 + Hs3st5 protein_coding processed_transcript MGP_129S1SvImJ_T0027572.1 MGP_129S1SvImJ_G0017898.1 mouse_genomes_project 10 132948869 132949953 - MGP_129S1SvImJ_P0027572 Olfr769 protein_coding protein_coding MGP_129S1SvImJ_T0026641.1 MGP_129S1SvImJ_G0017593.1 mouse_genomes_project 10 85495673 85607967 + MGP_129S1SvImJ_P0026641 Polr3b protein_coding protein_coding MGP_129S1SvImJ_T0027157.1 MGP_129S1SvImJ_G0017752.1 mouse_genomes_project 10 119872436 119885247 - MGP_129S1SvImJ_P0027157 Cct2 protein_coding protein_coding MGP_129S1SvImJ_T0102122.1 MGP_129S1SvImJ_G0039957.1 mouse_genomes_project 10 133859918 133861058 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0026352.1 MGP_129S1SvImJ_G0017524.1 mouse_genomes_project 10 81514990 81519307 - MGP_129S1SvImJ_P0026352 Gm10146 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0026353.1 MGP_129S1SvImJ_G0017524.1 mouse_genomes_project 10 81516949 81519330 - MGP_129S1SvImJ_P0026353 Gm10146 protein_coding protein_coding MGP_129S1SvImJ_T0024392.1 MGP_129S1SvImJ_G0016971.1 mouse_genomes_project 10 159424 174303 - MGP_129S1SvImJ_P0024392 H60c protein_coding protein_coding MGP_129S1SvImJ_T0098295.1 MGP_129S1SvImJ_G0036380.1 mouse_genomes_project 10 81486802 81491036 + pseudogene pseudogene MGP_129S1SvImJ_T0025822.1 MGP_129S1SvImJ_G0017380.1 mouse_genomes_project 10 76487653 76493733 - MGP_129S1SvImJ_P0025822 Dip2a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025823.1 MGP_129S1SvImJ_G0017380.1 mouse_genomes_project 10 76490960 76575956 - MGP_129S1SvImJ_P0025823 Dip2a protein_coding protein_coding MGP_129S1SvImJ_T0025824.1 MGP_129S1SvImJ_G0017380.1 mouse_genomes_project 10 76491258 76514050 - Dip2a protein_coding retained_intron MGP_129S1SvImJ_T0025825.1 MGP_129S1SvImJ_G0017380.1 mouse_genomes_project 10 76491268 76575862 - MGP_129S1SvImJ_P0025825 Dip2a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0025826.1 MGP_129S1SvImJ_G0017380.1 mouse_genomes_project 10 76491275 76575956 - MGP_129S1SvImJ_P0025826 Dip2a protein_coding protein_coding MGP_129S1SvImJ_T0025827.1 MGP_129S1SvImJ_G0017380.1 mouse_genomes_project 10 76491275 76575925 - MGP_129S1SvImJ_P0025827 Dip2a protein_coding protein_coding MGP_129S1SvImJ_T0025828.1 MGP_129S1SvImJ_G0017380.1 mouse_genomes_project 10 76492896 76498796 - Dip2a protein_coding retained_intron MGP_129S1SvImJ_T0025829.1 MGP_129S1SvImJ_G0017380.1 mouse_genomes_project 10 76510799 76520652 - MGP_129S1SvImJ_P0025829 Dip2a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025830.1 MGP_129S1SvImJ_G0017380.1 mouse_genomes_project 10 76523469 76575897 - Dip2a protein_coding retained_intron MGP_129S1SvImJ_T0027033.1 MGP_129S1SvImJ_G0017704.1 mouse_genomes_project 10 107951521 107958287 + Ccdc59 protein_coding retained_intron MGP_129S1SvImJ_T0027034.1 MGP_129S1SvImJ_G0017704.1 mouse_genomes_project 10 107951521 107958287 + MGP_129S1SvImJ_P0027034 Ccdc59 protein_coding protein_coding MGP_129S1SvImJ_T0027035.1 MGP_129S1SvImJ_G0017704.1 mouse_genomes_project 10 107951958 107953437 + Ccdc59 protein_coding retained_intron MGP_129S1SvImJ_T0025012.1 MGP_129S1SvImJ_G0017162.1 mouse_genomes_project 10 38838384 38854933 - MGP_129S1SvImJ_P0025012 Amd1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0003121.1 MGP_129S1SvImJ_G0002906.1 mouse_genomes_project 10 124104412 124107121 + Gm4473 antisense antisense MGP_129S1SvImJ_T0026673.1 MGP_129S1SvImJ_G0017606.1 mouse_genomes_project 10 86903830 86958242 - MGP_129S1SvImJ_P0026673 Bpifc protein_coding protein_coding MGP_129S1SvImJ_T0026674.1 MGP_129S1SvImJ_G0017606.1 mouse_genomes_project 10 86942259 86958203 - MGP_129S1SvImJ_P0026674 Bpifc protein_coding protein_coding MGP_129S1SvImJ_T0027565.1 MGP_129S1SvImJ_G0017891.1 mouse_genomes_project 10 132734816 132760282 + MGP_129S1SvImJ_P0027565 Itga7 protein_coding protein_coding MGP_129S1SvImJ_T0098439.1 MGP_129S1SvImJ_G0036524.1 mouse_genomes_project 10 78754095 78754214 + n-R5s77 rRNA rRNA MGP_129S1SvImJ_T0027044.1 MGP_129S1SvImJ_G0017709.1 mouse_genomes_project 10 109688591 109692818 - MGP_129S1SvImJ_P0027044 Myf6 protein_coding protein_coding MGP_129S1SvImJ_T0026461.1 MGP_129S1SvImJ_G0017555.1 mouse_genomes_project 10 82075420 82077208 - MGP_129S1SvImJ_P0026461 4930404N11Rik protein_coding protein_coding MGP_129S1SvImJ_T0026462.1 MGP_129S1SvImJ_G0017555.1 mouse_genomes_project 10 82076276 82077230 - 4930404N11Rik protein_coding retained_intron MGP_129S1SvImJ_T0026463.1 MGP_129S1SvImJ_G0017555.1 mouse_genomes_project 10 82076377 82078170 - MGP_129S1SvImJ_P0026463 4930404N11Rik protein_coding protein_coding MGP_129S1SvImJ_T0026464.1 MGP_129S1SvImJ_G0017555.1 mouse_genomes_project 10 82076400 82078144 - 4930404N11Rik protein_coding retained_intron MGP_129S1SvImJ_T0102115.1 MGP_129S1SvImJ_G0039950.1 mouse_genomes_project 10 108601471 108601937 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0025550.1 MGP_129S1SvImJ_G0017325.1 mouse_genomes_project 10 67309603 67314046 - MGP_129S1SvImJ_P0025550 Ado protein_coding protein_coding MGP_129S1SvImJ_T0024900.1 MGP_129S1SvImJ_G0017119.1 mouse_genomes_project 10 29055286 29065729 - MGP_129S1SvImJ_P0024900 Hey2 protein_coding protein_coding MGP_129S1SvImJ_T0026843.1 MGP_129S1SvImJ_G0017643.1 mouse_genomes_project 10 92360171 92386137 + MGP_129S1SvImJ_P0026843 Ikbip protein_coding protein_coding MGP_129S1SvImJ_T0026844.1 MGP_129S1SvImJ_G0017643.1 mouse_genomes_project 10 92360288 92378959 + MGP_129S1SvImJ_P0026844 Ikbip protein_coding protein_coding MGP_129S1SvImJ_T0026845.1 MGP_129S1SvImJ_G0017643.1 mouse_genomes_project 10 92360337 92372159 + Ikbip protein_coding processed_transcript MGP_129S1SvImJ_T0026846.1 MGP_129S1SvImJ_G0017643.1 mouse_genomes_project 10 92360351 92372742 + Ikbip protein_coding retained_intron MGP_129S1SvImJ_T0026847.1 MGP_129S1SvImJ_G0017643.1 mouse_genomes_project 10 92374874 92385625 + Ikbip protein_coding processed_transcript MGP_129S1SvImJ_T0012402.1 MGP_129S1SvImJ_G0010491.1 mouse_genomes_project 10 5035641 5036284 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0025241.1 MGP_129S1SvImJ_G0017242.1 mouse_genomes_project 10 57172739 57181556 + MGP_129S1SvImJ_P0025241 Smpdl3a protein_coding protein_coding MGP_129S1SvImJ_T0025242.1 MGP_129S1SvImJ_G0017242.1 mouse_genomes_project 10 57172778 57197075 + MGP_129S1SvImJ_P0025242 Smpdl3a protein_coding protein_coding MGP_129S1SvImJ_T0025243.1 MGP_129S1SvImJ_G0017242.1 mouse_genomes_project 10 57172972 57186464 + Smpdl3a protein_coding processed_transcript MGP_129S1SvImJ_T0025715.1 MGP_129S1SvImJ_G0017348.1 mouse_genomes_project 10 75089589 75166514 - MGP_129S1SvImJ_P0025715 Rsph14 protein_coding protein_coding MGP_129S1SvImJ_T0025716.1 MGP_129S1SvImJ_G0017348.1 mouse_genomes_project 10 75089589 75166502 - MGP_129S1SvImJ_P0025716 Rsph14 protein_coding protein_coding MGP_129S1SvImJ_T0025717.1 MGP_129S1SvImJ_G0017348.1 mouse_genomes_project 10 75089589 75166535 - MGP_129S1SvImJ_P0025717 Rsph14 protein_coding protein_coding MGP_129S1SvImJ_T0025718.1 MGP_129S1SvImJ_G0017348.1 mouse_genomes_project 10 75091782 75166502 - MGP_129S1SvImJ_P0025718 Rsph14 protein_coding protein_coding MGP_129S1SvImJ_T0025719.1 MGP_129S1SvImJ_G0017348.1 mouse_genomes_project 10 75093780 75166511 - MGP_129S1SvImJ_P0025719 Rsph14 protein_coding protein_coding MGP_129S1SvImJ_T0025723.1 MGP_129S1SvImJ_G0017348.1 mouse_genomes_project 10 75156249 75166480 - MGP_129S1SvImJ_P0025723 Rsph14 protein_coding protein_coding MGP_129S1SvImJ_T0025724.1 MGP_129S1SvImJ_G0017348.1 mouse_genomes_project 10 75158455 75166535 - Rsph14 protein_coding retained_intron MGP_129S1SvImJ_T0003108.1 MGP_129S1SvImJ_G0002898.1 mouse_genomes_project 10 117464745 117480185 + Gm15723 antisense antisense MGP_129S1SvImJ_T0026968.1 MGP_129S1SvImJ_G0017682.1 mouse_genomes_project 10 100714337 100831743 + MGP_129S1SvImJ_P0026968 Atp2b1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0026969.1 MGP_129S1SvImJ_G0017682.1 mouse_genomes_project 10 100714788 100831744 + MGP_129S1SvImJ_P0026969 Atp2b1 protein_coding protein_coding MGP_129S1SvImJ_T0024535.1 MGP_129S1SvImJ_G0017001.1 mouse_genomes_project 10 5060424 5103682 + MGP_129S1SvImJ_P0024535 Zc3h12d protein_coding protein_coding MGP_129S1SvImJ_T0009659.1 MGP_129S1SvImJ_G0007775.1 mouse_genomes_project 10 133467730 133468825 - miRNA miRNA MGP_129S1SvImJ_T0098701.1 MGP_129S1SvImJ_G0036786.1 mouse_genomes_project 10 27110916 27111070 - Gm22811 ribozyme ribozyme MGP_129S1SvImJ_T0025304.1 MGP_129S1SvImJ_G0017263.1 mouse_genomes_project 10 59185961 59206472 - MGP_129S1SvImJ_P0025304 Anapc16 protein_coding protein_coding MGP_129S1SvImJ_T0025305.1 MGP_129S1SvImJ_G0017263.1 mouse_genomes_project 10 59186460 59206448 - MGP_129S1SvImJ_P0025305 Anapc16 protein_coding protein_coding MGP_129S1SvImJ_T0025306.1 MGP_129S1SvImJ_G0017263.1 mouse_genomes_project 10 59186956 59188936 - Anapc16 protein_coding processed_transcript MGP_129S1SvImJ_T0025307.1 MGP_129S1SvImJ_G0017263.1 mouse_genomes_project 10 59186975 59206332 - MGP_129S1SvImJ_P0025307 Anapc16 protein_coding protein_coding MGP_129S1SvImJ_T0025308.1 MGP_129S1SvImJ_G0017263.1 mouse_genomes_project 10 59187031 59206423 - MGP_129S1SvImJ_P0025308 Anapc16 protein_coding protein_coding MGP_129S1SvImJ_T0025309.1 MGP_129S1SvImJ_G0017263.1 mouse_genomes_project 10 59187138 59206106 - MGP_129S1SvImJ_P0025309 Anapc16 protein_coding protein_coding MGP_129S1SvImJ_T0025310.1 MGP_129S1SvImJ_G0017263.1 mouse_genomes_project 10 59188918 59189633 - Anapc16 protein_coding retained_intron MGP_129S1SvImJ_T0025311.1 MGP_129S1SvImJ_G0017263.1 mouse_genomes_project 10 59195785 59198249 - Anapc16 protein_coding retained_intron MGP_129S1SvImJ_T0024655.1 MGP_129S1SvImJ_G0017029.1 mouse_genomes_project 10 12204057 12265168 + MGP_129S1SvImJ_P0024655 Nmbr protein_coding protein_coding MGP_129S1SvImJ_T0024656.1 MGP_129S1SvImJ_G0017029.1 mouse_genomes_project 10 12204063 12251721 + Nmbr protein_coding processed_transcript MGP_129S1SvImJ_T0024657.1 MGP_129S1SvImJ_G0017029.1 mouse_genomes_project 10 12204075 12257416 + Nmbr protein_coding processed_transcript MGP_129S1SvImJ_T0024658.1 MGP_129S1SvImJ_G0017029.1 mouse_genomes_project 10 12204087 12265691 + MGP_129S1SvImJ_P0024658 Nmbr protein_coding protein_coding MGP_129S1SvImJ_T0024659.1 MGP_129S1SvImJ_G0017029.1 mouse_genomes_project 10 12204093 12217114 + Nmbr protein_coding retained_intron MGP_129S1SvImJ_T0024661.1 MGP_129S1SvImJ_G0017029.1 mouse_genomes_project 10 12258553 12269233 + MGP_129S1SvImJ_P0024661 Nmbr protein_coding protein_coding MGP_129S1SvImJ_T0024662.1 MGP_129S1SvImJ_G0017029.1 mouse_genomes_project 10 12258615 12268966 + MGP_129S1SvImJ_P0024662 Nmbr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024663.1 MGP_129S1SvImJ_G0017029.1 mouse_genomes_project 10 12258615 12268966 + MGP_129S1SvImJ_P0024663 Nmbr protein_coding protein_coding MGP_129S1SvImJ_T0099213.1 MGP_129S1SvImJ_G0037280.1 mouse_genomes_project 10 120609383 120609490 - Gm25709 snRNA snRNA MGP_129S1SvImJ_T0017158.1 MGP_129S1SvImJ_G0015140.1 mouse_genomes_project 10 107676335 107684420 + Gm15663 processed_transcript antisense MGP_129S1SvImJ_T0017159.1 MGP_129S1SvImJ_G0015140.1 mouse_genomes_project 10 107676941 107686254 + Gm15663 processed_transcript lincRNA MGP_129S1SvImJ_T0006133.1 MGP_129S1SvImJ_G0005133.1 mouse_genomes_project 10 81207670 81209852 + Gm26710 lincRNA lincRNA MGP_129S1SvImJ_T0099167.1 MGP_129S1SvImJ_G0037234.1 mouse_genomes_project 10 29395596 29395703 - Gm23790 snRNA snRNA MGP_129S1SvImJ_T0026619.1 MGP_129S1SvImJ_G0017588.1 mouse_genomes_project 10 84410680 84465466 - MGP_129S1SvImJ_P0026619 Appl2 protein_coding protein_coding MGP_129S1SvImJ_T0026620.1 MGP_129S1SvImJ_G0017588.1 mouse_genomes_project 10 84411044 84413778 - MGP_129S1SvImJ_P0026620 Appl2 protein_coding protein_coding MGP_129S1SvImJ_T0026621.1 MGP_129S1SvImJ_G0017588.1 mouse_genomes_project 10 84411389 84421472 - MGP_129S1SvImJ_P0026621 Appl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026622.1 MGP_129S1SvImJ_G0017588.1 mouse_genomes_project 10 84412551 84414032 - Appl2 protein_coding retained_intron MGP_129S1SvImJ_T0026623.1 MGP_129S1SvImJ_G0017588.1 mouse_genomes_project 10 84413414 84424343 - Appl2 protein_coding retained_intron MGP_129S1SvImJ_T0026624.1 MGP_129S1SvImJ_G0017588.1 mouse_genomes_project 10 84413518 84423732 - Appl2 protein_coding retained_intron MGP_129S1SvImJ_T0026625.1 MGP_129S1SvImJ_G0017588.1 mouse_genomes_project 10 84417623 84465398 - Appl2 protein_coding retained_intron MGP_129S1SvImJ_T0026626.1 MGP_129S1SvImJ_G0017588.1 mouse_genomes_project 10 84417743 84424190 - Appl2 protein_coding retained_intron MGP_129S1SvImJ_T0026627.1 MGP_129S1SvImJ_G0017588.1 mouse_genomes_project 10 84421070 84423566 - Appl2 protein_coding retained_intron MGP_129S1SvImJ_T0026628.1 MGP_129S1SvImJ_G0017588.1 mouse_genomes_project 10 84426720 84440764 - Appl2 protein_coding processed_transcript MGP_129S1SvImJ_T0026629.1 MGP_129S1SvImJ_G0017588.1 mouse_genomes_project 10 84429880 84465393 - MGP_129S1SvImJ_P0026629 Appl2 protein_coding protein_coding MGP_129S1SvImJ_T0026630.1 MGP_129S1SvImJ_G0017588.1 mouse_genomes_project 10 84433174 84465331 - MGP_129S1SvImJ_P0026630 Appl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026631.1 MGP_129S1SvImJ_G0017588.1 mouse_genomes_project 10 84433288 84449905 - Appl2 protein_coding processed_transcript MGP_129S1SvImJ_T0026632.1 MGP_129S1SvImJ_G0017588.1 mouse_genomes_project 10 84437107 84465403 - MGP_129S1SvImJ_P0026632 Appl2 protein_coding protein_coding MGP_129S1SvImJ_T0027281.1 MGP_129S1SvImJ_G0017792.1 mouse_genomes_project 10 126463296 126551026 - MGP_129S1SvImJ_P0027281 Usp15 protein_coding protein_coding MGP_129S1SvImJ_T0027101.1 MGP_129S1SvImJ_G0017733.1 mouse_genomes_project 10 117755837 117870926 - MGP_129S1SvImJ_P0027101 Tph2 protein_coding protein_coding MGP_129S1SvImJ_T0027102.1 MGP_129S1SvImJ_G0017733.1 mouse_genomes_project 10 117859215 117861454 - Tph2 protein_coding processed_transcript MGP_129S1SvImJ_T0102117.1 MGP_129S1SvImJ_G0039952.1 mouse_genomes_project 10 133145263 133145470 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0026662.1 MGP_129S1SvImJ_G0017602.1 mouse_genomes_project 10 86808942 86826226 + MGP_129S1SvImJ_P0026662 Pwp1 protein_coding protein_coding MGP_129S1SvImJ_T0026663.1 MGP_129S1SvImJ_G0017602.1 mouse_genomes_project 10 86808995 86821818 + Pwp1 protein_coding retained_intron MGP_129S1SvImJ_T0026664.1 MGP_129S1SvImJ_G0017602.1 mouse_genomes_project 10 86809017 86819221 + MGP_129S1SvImJ_P0026664 Pwp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026665.1 MGP_129S1SvImJ_G0017602.1 mouse_genomes_project 10 86813365 86821617 + Pwp1 protein_coding retained_intron MGP_129S1SvImJ_T0012428.1 MGP_129S1SvImJ_G0010517.1 mouse_genomes_project 10 51326887 51327447 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0025239.1 MGP_129S1SvImJ_G0017241.1 mouse_genomes_project 10 57162341 57165911 + MGP_129S1SvImJ_P0025239 Fabp7 protein_coding protein_coding MGP_129S1SvImJ_T0025240.1 MGP_129S1SvImJ_G0017241.1 mouse_genomes_project 10 57162383 57164273 + MGP_129S1SvImJ_P0025240 Fabp7 protein_coding protein_coding MGP_129S1SvImJ_T0026405.1 MGP_129S1SvImJ_G0017540.1 mouse_genomes_project 10 81880166 81881423 - MGP_129S1SvImJ_P0026405 4930442H23Rik protein_coding protein_coding MGP_129S1SvImJ_T0099211.1 MGP_129S1SvImJ_G0037278.1 mouse_genomes_project 10 115482389 115482549 + Gm22507 snRNA snRNA MGP_129S1SvImJ_T0024408.1 MGP_129S1SvImJ_G0016977.1 mouse_genomes_project 10 1355012 1378725 - MGP_129S1SvImJ_P0024408 Zbtb2 protein_coding protein_coding MGP_129S1SvImJ_T0027625.1 MGP_129S1SvImJ_G0017934.1 mouse_genomes_project 10 133752599 133756577 - MGP_129S1SvImJ_P0027625 Olfr812 protein_coding protein_coding MGP_129S1SvImJ_T0027626.1 MGP_129S1SvImJ_G0017934.1 mouse_genomes_project 10 133752599 133753642 - MGP_129S1SvImJ_P0027626 Olfr812 protein_coding protein_coding MGP_129S1SvImJ_T0100461.1 MGP_129S1SvImJ_G0038528.1 mouse_genomes_project 10 120043266 120043343 - Gm26311 snoRNA snoRNA MGP_129S1SvImJ_T0024820.1 MGP_129S1SvImJ_G0017094.1 mouse_genomes_project 10 22766367 22836127 - MGP_129S1SvImJ_P0024820 Enpp3 protein_coding protein_coding MGP_129S1SvImJ_T0012431.1 MGP_129S1SvImJ_G0010520.1 mouse_genomes_project 10 57159820 57160268 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0027587.1 MGP_129S1SvImJ_G0017908.1 mouse_genomes_project 10 133275880 133276717 + MGP_129S1SvImJ_P0027587 Olfr784 protein_coding protein_coding MGP_129S1SvImJ_T0017166.1 MGP_129S1SvImJ_G0015144.1 mouse_genomes_project 10 130880061 130881154 - Gm4189 processed_transcript processed_transcript MGP_129S1SvImJ_T0017167.1 MGP_129S1SvImJ_G0015144.1 mouse_genomes_project 10 130880061 130881090 - Gm4189 processed_transcript retained_intron MGP_129S1SvImJ_T0027096.1 MGP_129S1SvImJ_G0017730.1 mouse_genomes_project 10 115479466 115482121 + MGP_129S1SvImJ_P0027096 Gm26596 protein_coding protein_coding MGP_129S1SvImJ_T0027062.1 MGP_129S1SvImJ_G0017716.1 mouse_genomes_project 10 113108730 113112102 + E2f7 protein_coding processed_transcript MGP_129S1SvImJ_T0027063.1 MGP_129S1SvImJ_G0017716.1 mouse_genomes_project 10 113108756 113120506 + MGP_129S1SvImJ_P0027063 E2f7 protein_coding protein_coding MGP_129S1SvImJ_T0027064.1 MGP_129S1SvImJ_G0017716.1 mouse_genomes_project 10 113108759 113132008 + E2f7 protein_coding retained_intron MGP_129S1SvImJ_T0027065.1 MGP_129S1SvImJ_G0017716.1 mouse_genomes_project 10 113108759 113152771 + MGP_129S1SvImJ_P0027065 E2f7 protein_coding protein_coding MGP_129S1SvImJ_T0027066.1 MGP_129S1SvImJ_G0017716.1 mouse_genomes_project 10 113108804 113150897 + MGP_129S1SvImJ_P0027066 E2f7 protein_coding protein_coding MGP_129S1SvImJ_T0027067.1 MGP_129S1SvImJ_G0017716.1 mouse_genomes_project 10 113108863 113118446 + MGP_129S1SvImJ_P0027067 E2f7 protein_coding protein_coding MGP_129S1SvImJ_T0027068.1 MGP_129S1SvImJ_G0017716.1 mouse_genomes_project 10 113118130 113120116 + E2f7 protein_coding processed_transcript MGP_129S1SvImJ_T0027069.1 MGP_129S1SvImJ_G0017716.1 mouse_genomes_project 10 113118200 113138521 + MGP_129S1SvImJ_P0027069 E2f7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027070.1 MGP_129S1SvImJ_G0017716.1 mouse_genomes_project 10 113127724 113129623 + E2f7 protein_coding retained_intron MGP_129S1SvImJ_T0101606.1 MGP_129S1SvImJ_G0039655.1 mouse_genomes_project 10 120532517 120534047 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101607.1 MGP_129S1SvImJ_G0039655.1 mouse_genomes_project 10 120532890 120533453 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0100462.1 MGP_129S1SvImJ_G0038529.1 mouse_genomes_project 10 123776949 123777009 + Gm24298 snoRNA snoRNA MGP_129S1SvImJ_T0024922.1 MGP_129S1SvImJ_G0017129.1 mouse_genomes_project 10 32230753 32240990 + MGP_129S1SvImJ_P0024922 Rsph4a protein_coding protein_coding MGP_129S1SvImJ_T0026585.1 MGP_129S1SvImJ_G0017578.1 mouse_genomes_project 10 83388123 83432717 - MGP_129S1SvImJ_P0026585 Glt8d2 protein_coding protein_coding MGP_129S1SvImJ_T0026586.1 MGP_129S1SvImJ_G0017578.1 mouse_genomes_project 10 83388996 83391158 - Glt8d2 protein_coding retained_intron MGP_129S1SvImJ_T0026587.1 MGP_129S1SvImJ_G0017578.1 mouse_genomes_project 10 83389249 83398844 - MGP_129S1SvImJ_P0026587 Glt8d2 protein_coding protein_coding MGP_129S1SvImJ_T0026588.1 MGP_129S1SvImJ_G0017578.1 mouse_genomes_project 10 83390486 83432684 - MGP_129S1SvImJ_P0026588 Glt8d2 protein_coding protein_coding MGP_129S1SvImJ_T0026589.1 MGP_129S1SvImJ_G0017578.1 mouse_genomes_project 10 83392738 83432684 - MGP_129S1SvImJ_P0026589 Glt8d2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026590.1 MGP_129S1SvImJ_G0017578.1 mouse_genomes_project 10 83403893 83409722 - MGP_129S1SvImJ_P0026590 Glt8d2 protein_coding protein_coding MGP_129S1SvImJ_T0026591.1 MGP_129S1SvImJ_G0017578.1 mouse_genomes_project 10 83408508 83432696 - Glt8d2 protein_coding retained_intron MGP_129S1SvImJ_T0017165.1 MGP_129S1SvImJ_G0015143.1 mouse_genomes_project 10 130878968 130880047 + Gm20492 processed_transcript processed_transcript MGP_129S1SvImJ_T0027571.1 MGP_129S1SvImJ_G0017897.1 mouse_genomes_project 10 132927039 132927978 - MGP_129S1SvImJ_P0027571 Olfr768 protein_coding protein_coding MGP_129S1SvImJ_T0026794.1 MGP_129S1SvImJ_G0017638.1 mouse_genomes_project 10 90832746 90882863 - MGP_129S1SvImJ_P0026794 Scyl2 protein_coding protein_coding MGP_129S1SvImJ_T0026795.1 MGP_129S1SvImJ_G0017638.1 mouse_genomes_project 10 90833694 90848497 - Scyl2 protein_coding processed_transcript MGP_129S1SvImJ_T0026796.1 MGP_129S1SvImJ_G0017638.1 mouse_genomes_project 10 90833977 90882846 - MGP_129S1SvImJ_P0026796 Scyl2 protein_coding protein_coding MGP_129S1SvImJ_T0026797.1 MGP_129S1SvImJ_G0017638.1 mouse_genomes_project 10 90843777 90848201 - Scyl2 protein_coding retained_intron MGP_129S1SvImJ_T0026798.1 MGP_129S1SvImJ_G0017638.1 mouse_genomes_project 10 90844775 90854831 - MGP_129S1SvImJ_P0026798 Scyl2 protein_coding protein_coding MGP_129S1SvImJ_T0026799.1 MGP_129S1SvImJ_G0017638.1 mouse_genomes_project 10 90863964 90882846 - Scyl2 protein_coding retained_intron MGP_129S1SvImJ_T0026800.1 MGP_129S1SvImJ_G0017638.1 mouse_genomes_project 10 90872226 90882841 - Scyl2 protein_coding retained_intron MGP_129S1SvImJ_T0026652.1 MGP_129S1SvImJ_G0017599.1 mouse_genomes_project 10 86033349 86088335 - MGP_129S1SvImJ_P0026652 Cry1 protein_coding protein_coding MGP_129S1SvImJ_T0012430.1 MGP_129S1SvImJ_G0010519.1 mouse_genomes_project 10 56977451 56978007 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0025792.1 MGP_129S1SvImJ_G0017367.1 mouse_genomes_project 10 76023535 76026559 - MGP_129S1SvImJ_P0025792 Gstt2 protein_coding protein_coding MGP_129S1SvImJ_T0025449.1 MGP_129S1SvImJ_G0017298.1 mouse_genomes_project 10 61879918 61881752 + MGP_129S1SvImJ_P0025449 4930507D05Rik protein_coding protein_coding MGP_129S1SvImJ_T0025204.1 MGP_129S1SvImJ_G0017231.1 mouse_genomes_project 10 52792520 52804773 + MGP_129S1SvImJ_P0025204 Asf1a protein_coding protein_coding MGP_129S1SvImJ_T0025495.1 MGP_129S1SvImJ_G0017310.1 mouse_genomes_project 10 62507093 62517272 - MGP_129S1SvImJ_P0025495 Hnrnph3 protein_coding protein_coding MGP_129S1SvImJ_T0025496.1 MGP_129S1SvImJ_G0017310.1 mouse_genomes_project 10 62507093 62517272 - MGP_129S1SvImJ_P0025496 Hnrnph3 protein_coding protein_coding MGP_129S1SvImJ_T0025497.1 MGP_129S1SvImJ_G0017310.1 mouse_genomes_project 10 62507857 62517595 - MGP_129S1SvImJ_P0025497 Hnrnph3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025498.1 MGP_129S1SvImJ_G0017310.1 mouse_genomes_project 10 62507860 62508598 - Hnrnph3 protein_coding retained_intron MGP_129S1SvImJ_T0025499.1 MGP_129S1SvImJ_G0017310.1 mouse_genomes_project 10 62508847 62510514 - Hnrnph3 protein_coding retained_intron MGP_129S1SvImJ_T0025500.1 MGP_129S1SvImJ_G0017310.1 mouse_genomes_project 10 62510236 62517225 - MGP_129S1SvImJ_P0025500 Hnrnph3 protein_coding protein_coding MGP_129S1SvImJ_T0024749.1 MGP_129S1SvImJ_G0017058.1 mouse_genomes_project 10 18917274 18957157 - MGP_129S1SvImJ_P0024749 Myb protein_coding protein_coding MGP_129S1SvImJ_T0024750.1 MGP_129S1SvImJ_G0017058.1 mouse_genomes_project 10 18917615 18957157 - MGP_129S1SvImJ_P0024750 Myb protein_coding protein_coding MGP_129S1SvImJ_T0024751.1 MGP_129S1SvImJ_G0017058.1 mouse_genomes_project 10 18932896 18957102 - Myb protein_coding retained_intron MGP_129S1SvImJ_T0006116.1 MGP_129S1SvImJ_G0005122.1 mouse_genomes_project 10 62809763 62813261 - Gm26789 lincRNA lincRNA MGP_129S1SvImJ_T0027482.1 MGP_129S1SvImJ_G0017854.1 mouse_genomes_project 10 131965376 131967147 + MGP_129S1SvImJ_P0027482 Apon protein_coding protein_coding MGP_129S1SvImJ_T0025022.1 MGP_129S1SvImJ_G0017169.1 mouse_genomes_project 10 39708300 39710598 - MGP_129S1SvImJ_P0025022 Gpr6 protein_coding protein_coding MGP_129S1SvImJ_T0025038.1 MGP_129S1SvImJ_G0017174.1 mouse_genomes_project 10 40127531 40132220 - Smpd2 protein_coding retained_intron MGP_129S1SvImJ_T0025041.1 MGP_129S1SvImJ_G0017174.1 mouse_genomes_project 10 40129061 40132011 - Smpd2 protein_coding retained_intron MGP_129S1SvImJ_T0025042.1 MGP_129S1SvImJ_G0017174.1 mouse_genomes_project 10 40129061 40132230 - MGP_129S1SvImJ_P0025042 Smpd2 protein_coding protein_coding MGP_129S1SvImJ_T0025043.1 MGP_129S1SvImJ_G0017174.1 mouse_genomes_project 10 40129067 40132220 - Smpd2 protein_coding retained_intron MGP_129S1SvImJ_T0025044.1 MGP_129S1SvImJ_G0017174.1 mouse_genomes_project 10 40129438 40130135 - Smpd2 protein_coding retained_intron MGP_129S1SvImJ_T0025045.1 MGP_129S1SvImJ_G0017174.1 mouse_genomes_project 10 40129528 40131987 - MGP_129S1SvImJ_P0025045 Smpd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025046.1 MGP_129S1SvImJ_G0017174.1 mouse_genomes_project 10 40129920 40131569 - Smpd2 protein_coding retained_intron MGP_129S1SvImJ_T0025047.1 MGP_129S1SvImJ_G0017174.1 mouse_genomes_project 10 40130248 40132228 - Smpd2 protein_coding retained_intron MGP_129S1SvImJ_T0025048.1 MGP_129S1SvImJ_G0017174.1 mouse_genomes_project 10 40130906 40132259 - Smpd2 protein_coding retained_intron MGP_129S1SvImJ_T0025020.1 MGP_129S1SvImJ_G0017168.1 mouse_genomes_project 10 39502306 39566423 + MGP_129S1SvImJ_P0025020 Wasf1 protein_coding protein_coding MGP_129S1SvImJ_T0025021.1 MGP_129S1SvImJ_G0017168.1 mouse_genomes_project 10 39502658 39566424 + MGP_129S1SvImJ_P0025021 Wasf1 protein_coding protein_coding MGP_129S1SvImJ_T0024784.1 MGP_129S1SvImJ_G0017071.1 mouse_genomes_project 10 21014719 21266751 - MGP_129S1SvImJ_P0024784 Eya4 protein_coding protein_coding MGP_129S1SvImJ_T0024785.1 MGP_129S1SvImJ_G0017071.1 mouse_genomes_project 10 21015314 21266743 - MGP_129S1SvImJ_P0024785 Eya4 protein_coding protein_coding MGP_129S1SvImJ_T0025776.1 MGP_129S1SvImJ_G0017360.1 mouse_genomes_project 10 75816755 75824146 - MGP_129S1SvImJ_P0025776 Susd2 protein_coding protein_coding MGP_129S1SvImJ_T0025777.1 MGP_129S1SvImJ_G0017360.1 mouse_genomes_project 10 75816755 75824146 - MGP_129S1SvImJ_P0025777 Susd2 protein_coding protein_coding MGP_129S1SvImJ_T0012435.1 MGP_129S1SvImJ_G0010524.1 mouse_genomes_project 10 60631798 60632245 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009649.1 MGP_129S1SvImJ_G0007765.1 mouse_genomes_project 10 130570258 130570379 + Mir546 miRNA miRNA MGP_129S1SvImJ_T0026875.1 MGP_129S1SvImJ_G0017649.1 mouse_genomes_project 10 94644154 94717975 - MGP_129S1SvImJ_P0026875 Elk3 protein_coding protein_coding MGP_129S1SvImJ_T0026876.1 MGP_129S1SvImJ_G0017649.1 mouse_genomes_project 10 94646038 94716274 - MGP_129S1SvImJ_P0026876 Elk3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026877.1 MGP_129S1SvImJ_G0017649.1 mouse_genomes_project 10 94646038 94717809 - MGP_129S1SvImJ_P0026877 Elk3 protein_coding protein_coding MGP_129S1SvImJ_T0026878.1 MGP_129S1SvImJ_G0017649.1 mouse_genomes_project 10 94683683 94717975 - Elk3 protein_coding retained_intron MGP_129S1SvImJ_T0025969.1 MGP_129S1SvImJ_G0017415.1 mouse_genomes_project 10 78452071 78456004 + Dnmt3l protein_coding processed_transcript MGP_129S1SvImJ_T0025970.1 MGP_129S1SvImJ_G0017415.1 mouse_genomes_project 10 78452411 78477671 + MGP_129S1SvImJ_P0025970 Dnmt3l protein_coding protein_coding MGP_129S1SvImJ_T0025971.1 MGP_129S1SvImJ_G0017415.1 mouse_genomes_project 10 78461704 78477671 + MGP_129S1SvImJ_P0025971 Dnmt3l protein_coding protein_coding MGP_129S1SvImJ_T0025972.1 MGP_129S1SvImJ_G0017415.1 mouse_genomes_project 10 78461821 78477665 + MGP_129S1SvImJ_P0025972 Dnmt3l protein_coding protein_coding MGP_129S1SvImJ_T0025973.1 MGP_129S1SvImJ_G0017415.1 mouse_genomes_project 10 78466697 78469231 + Dnmt3l protein_coding retained_intron MGP_129S1SvImJ_T0025974.1 MGP_129S1SvImJ_G0017415.1 mouse_genomes_project 10 78467197 78477664 + MGP_129S1SvImJ_P0025974 Dnmt3l protein_coding protein_coding MGP_129S1SvImJ_T0025975.1 MGP_129S1SvImJ_G0017415.1 mouse_genomes_project 10 78467197 78477664 + MGP_129S1SvImJ_P0025975 Dnmt3l protein_coding protein_coding MGP_129S1SvImJ_T0025976.1 MGP_129S1SvImJ_G0017415.1 mouse_genomes_project 10 78467197 78477664 + MGP_129S1SvImJ_P0025976 Dnmt3l protein_coding protein_coding MGP_129S1SvImJ_T0026488.1 MGP_129S1SvImJ_G0017560.1 mouse_genomes_project 10 82180417 82196959 - MGP_129S1SvImJ_P0026488 Celf5 protein_coding protein_coding MGP_129S1SvImJ_T0026489.1 MGP_129S1SvImJ_G0017560.1 mouse_genomes_project 10 82180418 82208504 - MGP_129S1SvImJ_P0026489 Celf5 protein_coding protein_coding MGP_129S1SvImJ_T0026490.1 MGP_129S1SvImJ_G0017560.1 mouse_genomes_project 10 82182109 82198676 - MGP_129S1SvImJ_P0026490 Celf5 protein_coding protein_coding MGP_129S1SvImJ_T0026491.1 MGP_129S1SvImJ_G0017560.1 mouse_genomes_project 10 82182727 82208479 - MGP_129S1SvImJ_P0026491 Celf5 protein_coding protein_coding MGP_129S1SvImJ_T0026492.1 MGP_129S1SvImJ_G0017560.1 mouse_genomes_project 10 82188194 82193893 - Celf5 protein_coding retained_intron MGP_129S1SvImJ_T0026493.1 MGP_129S1SvImJ_G0017560.1 mouse_genomes_project 10 82188686 82197210 - Celf5 protein_coding retained_intron MGP_129S1SvImJ_T0026494.1 MGP_129S1SvImJ_G0017560.1 mouse_genomes_project 10 82188938 82208467 - Celf5 protein_coding retained_intron MGP_129S1SvImJ_T0026495.1 MGP_129S1SvImJ_G0017560.1 mouse_genomes_project 10 82190624 82196834 - MGP_129S1SvImJ_P0026495 Celf5 protein_coding protein_coding MGP_129S1SvImJ_T0024797.1 MGP_129S1SvImJ_G0017078.1 mouse_genomes_project 10 21885677 21886709 + MGP_129S1SvImJ_P0024797 Taar3 protein_coding protein_coding MGP_129S1SvImJ_T0025566.1 MGP_129S1SvImJ_G0017332.1 mouse_genomes_project 10 69006789 69101426 + MGP_129S1SvImJ_P0025566 Rhobtb1 protein_coding protein_coding MGP_129S1SvImJ_T0025567.1 MGP_129S1SvImJ_G0017332.1 mouse_genomes_project 10 69062059 69142935 + MGP_129S1SvImJ_P0025567 Rhobtb1 protein_coding protein_coding MGP_129S1SvImJ_T0025569.1 MGP_129S1SvImJ_G0017332.1 mouse_genomes_project 10 69068582 69144826 + MGP_129S1SvImJ_P0025569 Rhobtb1 protein_coding protein_coding MGP_129S1SvImJ_T0025570.1 MGP_129S1SvImJ_G0017332.1 mouse_genomes_project 10 69068605 69126710 + Rhobtb1 protein_coding retained_intron MGP_129S1SvImJ_T0025571.1 MGP_129S1SvImJ_G0017332.1 mouse_genomes_project 10 69068624 69143034 + MGP_129S1SvImJ_P0025571 Rhobtb1 protein_coding protein_coding MGP_129S1SvImJ_T0025572.1 MGP_129S1SvImJ_G0017332.1 mouse_genomes_project 10 69069032 69117781 + MGP_129S1SvImJ_P0025572 Rhobtb1 protein_coding protein_coding MGP_129S1SvImJ_T0025573.1 MGP_129S1SvImJ_G0017332.1 mouse_genomes_project 10 69069119 69101436 + MGP_129S1SvImJ_P0025573 Rhobtb1 protein_coding protein_coding MGP_129S1SvImJ_T0025574.1 MGP_129S1SvImJ_G0017332.1 mouse_genomes_project 10 69069142 69144815 + MGP_129S1SvImJ_P0025574 Rhobtb1 protein_coding protein_coding MGP_129S1SvImJ_T0025575.1 MGP_129S1SvImJ_G0017332.1 mouse_genomes_project 10 69071246 69142745 + MGP_129S1SvImJ_P0025575 Rhobtb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025576.1 MGP_129S1SvImJ_G0017332.1 mouse_genomes_project 10 69075277 69101441 + MGP_129S1SvImJ_P0025576 Rhobtb1 protein_coding protein_coding MGP_129S1SvImJ_T0025577.1 MGP_129S1SvImJ_G0017332.1 mouse_genomes_project 10 69117209 69123390 + Rhobtb1 protein_coding processed_transcript MGP_129S1SvImJ_T0025578.1 MGP_129S1SvImJ_G0017332.1 mouse_genomes_project 10 69132401 69143034 + MGP_129S1SvImJ_P0025578 Rhobtb1 protein_coding protein_coding MGP_129S1SvImJ_T0025579.1 MGP_129S1SvImJ_G0017332.1 mouse_genomes_project 10 69132514 69139924 + Rhobtb1 protein_coding processed_transcript MGP_129S1SvImJ_T0024667.1 MGP_129S1SvImJ_G0017033.1 mouse_genomes_project 10 15557539 15603305 - MGP_129S1SvImJ_P0024667 protein_coding protein_coding MGP_129S1SvImJ_T0102114.1 MGP_129S1SvImJ_G0039949.1 mouse_genomes_project 10 107621518 107621702 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0026505.1 MGP_129S1SvImJ_G0017562.1 mouse_genomes_project 10 82223539 82225927 - MGP_129S1SvImJ_P0026505 S1pr4 protein_coding protein_coding MGP_129S1SvImJ_T0100447.1 MGP_129S1SvImJ_G0038514.1 mouse_genomes_project 10 94058828 94058971 - Gm24241 snoRNA snoRNA MGP_129S1SvImJ_T0024668.1 MGP_129S1SvImJ_G0017034.1 mouse_genomes_project 10 15674988 15688079 - MGP_129S1SvImJ_P0024668 Abracl protein_coding protein_coding MGP_129S1SvImJ_T0026979.1 MGP_129S1SvImJ_G0017687.1 mouse_genomes_project 10 101272832 101276110 + MGP_129S1SvImJ_P0026979 Gad1-ps protein_coding protein_coding MGP_129S1SvImJ_T0027074.1 MGP_129S1SvImJ_G0017719.1 mouse_genomes_project 10 113557934 113692225 + MGP_129S1SvImJ_P0027074 Osbpl8 protein_coding protein_coding MGP_129S1SvImJ_T0026239.1 MGP_129S1SvImJ_G0017493.1 mouse_genomes_project 10 80892103 80893739 + MGP_129S1SvImJ_P0026239 Rps15 protein_coding protein_coding MGP_129S1SvImJ_T0003031.1 MGP_129S1SvImJ_G0002840.1 mouse_genomes_project 10 12257031 12259117 - B230364G03Rik antisense antisense MGP_129S1SvImJ_T0026732.1 MGP_129S1SvImJ_G0017624.1 mouse_genomes_project 10 89270608 89317387 + MGP_129S1SvImJ_P0026732 Ccdc53 protein_coding protein_coding MGP_129S1SvImJ_T0026733.1 MGP_129S1SvImJ_G0017624.1 mouse_genomes_project 10 89270661 89285224 + MGP_129S1SvImJ_P0026733 Ccdc53 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026734.1 MGP_129S1SvImJ_G0017624.1 mouse_genomes_project 10 89270667 89317235 + MGP_129S1SvImJ_P0026734 Ccdc53 protein_coding protein_coding MGP_129S1SvImJ_T0026735.1 MGP_129S1SvImJ_G0017624.1 mouse_genomes_project 10 89270686 89294526 + MGP_129S1SvImJ_P0026735 Ccdc53 protein_coding protein_coding MGP_129S1SvImJ_T0026736.1 MGP_129S1SvImJ_G0017624.1 mouse_genomes_project 10 89270699 89284926 + Ccdc53 protein_coding retained_intron MGP_129S1SvImJ_T0026737.1 MGP_129S1SvImJ_G0017624.1 mouse_genomes_project 10 89270778 89294305 + MGP_129S1SvImJ_P0026737 Ccdc53 protein_coding protein_coding MGP_129S1SvImJ_T0026738.1 MGP_129S1SvImJ_G0017624.1 mouse_genomes_project 10 89274063 89306107 + Ccdc53 protein_coding processed_transcript MGP_129S1SvImJ_T0026739.1 MGP_129S1SvImJ_G0017624.1 mouse_genomes_project 10 89306875 89317236 + Ccdc53 protein_coding processed_transcript MGP_129S1SvImJ_T0026548.1 MGP_129S1SvImJ_G0017569.1 mouse_genomes_project 10 82359551 82365077 - MGP_129S1SvImJ_P0026548 Sirt6 protein_coding protein_coding MGP_129S1SvImJ_T0026549.1 MGP_129S1SvImJ_G0017569.1 mouse_genomes_project 10 82359553 82365554 - MGP_129S1SvImJ_P0026549 Sirt6 protein_coding protein_coding MGP_129S1SvImJ_T0026550.1 MGP_129S1SvImJ_G0017569.1 mouse_genomes_project 10 82363283 82365323 - Sirt6 protein_coding retained_intron MGP_129S1SvImJ_T0026551.1 MGP_129S1SvImJ_G0017569.1 mouse_genomes_project 10 82363535 82365014 - MGP_129S1SvImJ_P0026551 Sirt6 protein_coding protein_coding MGP_129S1SvImJ_T0099154.1 MGP_129S1SvImJ_G0037221.1 mouse_genomes_project 10 2430383 2430490 + Gm23573 snRNA snRNA MGP_129S1SvImJ_T0009591.1 MGP_129S1SvImJ_G0007707.1 mouse_genomes_project 10 43982353 43982433 - Gm23766 miRNA miRNA MGP_129S1SvImJ_T0026335.1 MGP_129S1SvImJ_G0017519.1 mouse_genomes_project 10 81451192 81457919 + MGP_129S1SvImJ_P0026335 Sf3a2 protein_coding protein_coding MGP_129S1SvImJ_T0026336.1 MGP_129S1SvImJ_G0017519.1 mouse_genomes_project 10 81451726 81457002 + MGP_129S1SvImJ_P0026336 Sf3a2 protein_coding protein_coding MGP_129S1SvImJ_T0026337.1 MGP_129S1SvImJ_G0017519.1 mouse_genomes_project 10 81451963 81455396 + MGP_129S1SvImJ_P0026337 Sf3a2 protein_coding protein_coding MGP_129S1SvImJ_T0026338.1 MGP_129S1SvImJ_G0017519.1 mouse_genomes_project 10 81455494 81457012 + Sf3a2 protein_coding retained_intron MGP_129S1SvImJ_T0027627.1 MGP_129S1SvImJ_G0017935.1 mouse_genomes_project 10 133768586 133769785 + MGP_129S1SvImJ_P0027627 Olfr813 protein_coding protein_coding MGP_129S1SvImJ_T0009605.1 MGP_129S1SvImJ_G0007721.1 mouse_genomes_project 10 77982805 77982889 + Mir1930 miRNA miRNA MGP_129S1SvImJ_T0009589.1 MGP_129S1SvImJ_G0007705.1 mouse_genomes_project 10 43212449 43212542 + Mir1929 miRNA miRNA MGP_129S1SvImJ_T0025198.1 MGP_129S1SvImJ_G0017227.1 mouse_genomes_project 10 51834601 52278451 + MGP_129S1SvImJ_P0025198 Slc35f1 protein_coding protein_coding MGP_129S1SvImJ_T0006174.1 MGP_129S1SvImJ_G0005157.1 mouse_genomes_project 10 119462280 119466888 + Gm26579 lincRNA lincRNA MGP_129S1SvImJ_T0102124.1 MGP_129S1SvImJ_G0039959.1 mouse_genomes_project 10 134036682 134037434 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0025406.1 MGP_129S1SvImJ_G0017291.1 mouse_genomes_project 10 61500643 61504039 - MGP_129S1SvImJ_P0025406 2010107G23Rik protein_coding protein_coding MGP_129S1SvImJ_T0025407.1 MGP_129S1SvImJ_G0017291.1 mouse_genomes_project 10 61501198 61503934 - MGP_129S1SvImJ_P0025407 2010107G23Rik protein_coding protein_coding MGP_129S1SvImJ_T0025408.1 MGP_129S1SvImJ_G0017291.1 mouse_genomes_project 10 61501198 61503957 - MGP_129S1SvImJ_P0025408 2010107G23Rik protein_coding protein_coding MGP_129S1SvImJ_T0025409.1 MGP_129S1SvImJ_G0017291.1 mouse_genomes_project 10 61501198 61504039 - MGP_129S1SvImJ_P0025409 2010107G23Rik protein_coding protein_coding MGP_129S1SvImJ_T0025410.1 MGP_129S1SvImJ_G0017291.1 mouse_genomes_project 10 61501200 61504002 - MGP_129S1SvImJ_P0025410 2010107G23Rik protein_coding protein_coding MGP_129S1SvImJ_T0025411.1 MGP_129S1SvImJ_G0017291.1 mouse_genomes_project 10 61501823 61532866 - MGP_129S1SvImJ_P0025411 2010107G23Rik protein_coding protein_coding MGP_129S1SvImJ_T0025412.1 MGP_129S1SvImJ_G0017291.1 mouse_genomes_project 10 61501905 61527683 - MGP_129S1SvImJ_P0025412 2010107G23Rik protein_coding protein_coding MGP_129S1SvImJ_T0025413.1 MGP_129S1SvImJ_G0017291.1 mouse_genomes_project 10 61501906 61537581 - MGP_129S1SvImJ_P0025413 2010107G23Rik protein_coding protein_coding MGP_129S1SvImJ_T0025414.1 MGP_129S1SvImJ_G0017291.1 mouse_genomes_project 10 61501908 61503485 - MGP_129S1SvImJ_P0025414 2010107G23Rik protein_coding protein_coding MGP_129S1SvImJ_T0025415.1 MGP_129S1SvImJ_G0017291.1 mouse_genomes_project 10 61502935 61537585 - MGP_129S1SvImJ_P0025415 2010107G23Rik protein_coding protein_coding MGP_129S1SvImJ_T0025417.1 MGP_129S1SvImJ_G0017291.1 mouse_genomes_project 10 61527497 61537595 - 2010107G23Rik protein_coding processed_transcript MGP_129S1SvImJ_T0009585.1 MGP_129S1SvImJ_G0007701.1 mouse_genomes_project 10 22908631 22908701 + Mir6905 miRNA miRNA MGP_129S1SvImJ_T0026702.1 MGP_129S1SvImJ_G0017616.1 mouse_genomes_project 10 87821573 87997647 - MGP_129S1SvImJ_P0026702 Stab2 protein_coding protein_coding MGP_129S1SvImJ_T0026703.1 MGP_129S1SvImJ_G0017616.1 mouse_genomes_project 10 87821696 87875234 - MGP_129S1SvImJ_P0026703 Stab2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026704.1 MGP_129S1SvImJ_G0017616.1 mouse_genomes_project 10 87853361 87860427 - Stab2 protein_coding retained_intron MGP_129S1SvImJ_T0026705.1 MGP_129S1SvImJ_G0017616.1 mouse_genomes_project 10 87855330 87869377 - Stab2 protein_coding retained_intron MGP_129S1SvImJ_T0026706.1 MGP_129S1SvImJ_G0017616.1 mouse_genomes_project 10 87903461 87927864 - Stab2 protein_coding processed_transcript MGP_129S1SvImJ_T0026707.1 MGP_129S1SvImJ_G0017616.1 mouse_genomes_project 10 87978896 87997634 - Stab2 protein_coding processed_transcript MGP_129S1SvImJ_T0026708.1 MGP_129S1SvImJ_G0017616.1 mouse_genomes_project 10 87980579 87997644 - Stab2 protein_coding processed_transcript MGP_129S1SvImJ_T0017147.1 MGP_129S1SvImJ_G0015135.1 mouse_genomes_project 10 40210845 40219328 + 5730435O14Rik processed_transcript antisense MGP_129S1SvImJ_T0017148.1 MGP_129S1SvImJ_G0015135.1 mouse_genomes_project 10 40218425 40219317 + 5730435O14Rik processed_transcript retained_intron MGP_129S1SvImJ_T0000859.1 MGP_129S1SvImJ_G0000792.1 mouse_genomes_project 10 121897163 121899880 + TEC TEC MGP_129S1SvImJ_T0026568.1 MGP_129S1SvImJ_G0017572.1 mouse_genomes_project 10 82753852 82755374 + MGP_129S1SvImJ_P0026568 protein_coding protein_coding MGP_129S1SvImJ_T0027023.1 MGP_129S1SvImJ_G0017702.1 mouse_genomes_project 10 107268817 107317046 - Tmtc2 protein_coding processed_transcript MGP_129S1SvImJ_T0027024.1 MGP_129S1SvImJ_G0017702.1 mouse_genomes_project 10 107268817 107676818 - MGP_129S1SvImJ_P0027024 Tmtc2 protein_coding protein_coding MGP_129S1SvImJ_T0027025.1 MGP_129S1SvImJ_G0017702.1 mouse_genomes_project 10 107270658 107317031 - Tmtc2 protein_coding processed_transcript MGP_129S1SvImJ_T0027026.1 MGP_129S1SvImJ_G0017702.1 mouse_genomes_project 10 107270817 107280885 - Tmtc2 protein_coding processed_transcript MGP_129S1SvImJ_T0027027.1 MGP_129S1SvImJ_G0017702.1 mouse_genomes_project 10 107355874 107676834 - Tmtc2 protein_coding retained_intron MGP_129S1SvImJ_T0027028.1 MGP_129S1SvImJ_G0017702.1 mouse_genomes_project 10 107508787 107637676 - Tmtc2 protein_coding processed_transcript MGP_129S1SvImJ_T0099208.1 MGP_129S1SvImJ_G0037275.1 mouse_genomes_project 10 111675087 111675193 - Gm23041 snRNA snRNA MGP_129S1SvImJ_T0003089.1 MGP_129S1SvImJ_G0002885.1 mouse_genomes_project 10 86966787 86968676 - A230060F14Rik antisense antisense MGP_129S1SvImJ_T0003090.1 MGP_129S1SvImJ_G0002885.1 mouse_genomes_project 10 86968126 86968672 - A230060F14Rik antisense antisense MGP_129S1SvImJ_T0025075.1 MGP_129S1SvImJ_G0017182.1 mouse_genomes_project 10 40581632 40692942 - MGP_129S1SvImJ_P0025075 Armc2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0025076.1 MGP_129S1SvImJ_G0017182.1 mouse_genomes_project 10 40581641 40647853 - Armc2 protein_coding retained_intron MGP_129S1SvImJ_T0025077.1 MGP_129S1SvImJ_G0017182.1 mouse_genomes_project 10 40582683 40647231 - Armc2 protein_coding retained_intron MGP_129S1SvImJ_T0025078.1 MGP_129S1SvImJ_G0017182.1 mouse_genomes_project 10 40583429 40693063 - MGP_129S1SvImJ_P0025078 Armc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025079.1 MGP_129S1SvImJ_G0017182.1 mouse_genomes_project 10 40657851 40664465 - MGP_129S1SvImJ_P0025079 Armc2 protein_coding protein_coding MGP_129S1SvImJ_T0025080.1 MGP_129S1SvImJ_G0017182.1 mouse_genomes_project 10 40671127 40693006 - MGP_129S1SvImJ_P0025080 Armc2 protein_coding protein_coding MGP_129S1SvImJ_T0025081.1 MGP_129S1SvImJ_G0017182.1 mouse_genomes_project 10 40671667 40693008 - MGP_129S1SvImJ_P0025081 Armc2 protein_coding protein_coding MGP_129S1SvImJ_T0101603.1 MGP_129S1SvImJ_G0039653.1 mouse_genomes_project 10 87894121 87897359 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0025932.1 MGP_129S1SvImJ_G0017410.1 mouse_genomes_project 10 78295446 78302403 - MGP_129S1SvImJ_P0025932 Lrrc3 protein_coding protein_coding MGP_129S1SvImJ_T0012436.1 MGP_129S1SvImJ_G0010525.1 mouse_genomes_project 10 60631801 60632163 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024796.1 MGP_129S1SvImJ_G0017077.1 mouse_genomes_project 10 21874694 21877706 + MGP_129S1SvImJ_P0024796 Taar2 protein_coding protein_coding MGP_129S1SvImJ_T0024747.1 MGP_129S1SvImJ_G0017057.1 mouse_genomes_project 10 18727060 18867224 + MGP_129S1SvImJ_P0024747 Ahi1 protein_coding protein_coding MGP_129S1SvImJ_T0024748.1 MGP_129S1SvImJ_G0017057.1 mouse_genomes_project 10 18820002 18867224 + MGP_129S1SvImJ_P0024748 Ahi1 protein_coding protein_coding MGP_129S1SvImJ_T0026310.1 MGP_129S1SvImJ_G0017510.1 mouse_genomes_project 10 81234905 81249656 + MGP_129S1SvImJ_P0026310 Scamp4 protein_coding protein_coding MGP_129S1SvImJ_T0026311.1 MGP_129S1SvImJ_G0017510.1 mouse_genomes_project 10 81235276 81248836 + MGP_129S1SvImJ_P0026311 Scamp4 protein_coding protein_coding MGP_129S1SvImJ_T0000845.1 MGP_129S1SvImJ_G0000779.1 mouse_genomes_project 10 79065265 79068018 - TEC TEC MGP_129S1SvImJ_T0024581.1 MGP_129S1SvImJ_G0017014.1 mouse_genomes_project 10 8716462 8833107 + MGP_129S1SvImJ_P0024581 Epm2a protein_coding protein_coding MGP_129S1SvImJ_T0024582.1 MGP_129S1SvImJ_G0017014.1 mouse_genomes_project 10 8716511 8821302 + Epm2a protein_coding processed_transcript MGP_129S1SvImJ_T0099160.1 MGP_129S1SvImJ_G0037227.1 mouse_genomes_project 10 14721051 14721148 + Gm25382 snRNA snRNA MGP_129S1SvImJ_T0009626.1 MGP_129S1SvImJ_G0007742.1 mouse_genomes_project 10 93470906 93470990 - Mir1251 miRNA miRNA MGP_129S1SvImJ_T0026482.1 MGP_129S1SvImJ_G0017559.1 mouse_genomes_project 10 82110501 82142113 - MGP_129S1SvImJ_P0026482 Nfic protein_coding protein_coding MGP_129S1SvImJ_T0026483.1 MGP_129S1SvImJ_G0017559.1 mouse_genomes_project 10 82113453 82142099 - MGP_129S1SvImJ_P0026483 Nfic protein_coding protein_coding MGP_129S1SvImJ_T0026484.1 MGP_129S1SvImJ_G0017559.1 mouse_genomes_project 10 82113453 82142040 - MGP_129S1SvImJ_P0026484 Nfic protein_coding protein_coding MGP_129S1SvImJ_T0026485.1 MGP_129S1SvImJ_G0017559.1 mouse_genomes_project 10 82113511 82114870 - Nfic protein_coding processed_transcript MGP_129S1SvImJ_T0026486.1 MGP_129S1SvImJ_G0017559.1 mouse_genomes_project 10 82115084 82121957 - MGP_129S1SvImJ_P0026486 Nfic protein_coding protein_coding MGP_129S1SvImJ_T0026487.1 MGP_129S1SvImJ_G0017559.1 mouse_genomes_project 10 82115268 82146957 - MGP_129S1SvImJ_P0026487 Nfic protein_coding protein_coding MGP_129S1SvImJ_T0024564.1 MGP_129S1SvImJ_G0017010.1 mouse_genomes_project 10 8043492 8044003 + MGP_129S1SvImJ_P0024564 Gm10944 protein_coding protein_coding MGP_129S1SvImJ_T0025263.1 MGP_129S1SvImJ_G0017249.1 mouse_genomes_project 10 57721755 57798347 - MGP_129S1SvImJ_P0025263 Edar protein_coding protein_coding MGP_129S1SvImJ_T0026962.1 MGP_129S1SvImJ_G0017677.1 mouse_genomes_project 10 99347403 99353887 + MGP_129S1SvImJ_P0026962 Kera protein_coding protein_coding MGP_129S1SvImJ_T0025981.1 MGP_129S1SvImJ_G0017420.1 mouse_genomes_project 10 78709108 78792251 - MGP_129S1SvImJ_P0025981 Agpat3 protein_coding protein_coding MGP_129S1SvImJ_T0025982.1 MGP_129S1SvImJ_G0017420.1 mouse_genomes_project 10 78711493 78791674 - MGP_129S1SvImJ_P0025982 Agpat3 protein_coding protein_coding MGP_129S1SvImJ_T0025983.1 MGP_129S1SvImJ_G0017420.1 mouse_genomes_project 10 78711493 78738129 - MGP_129S1SvImJ_P0025983 Agpat3 protein_coding protein_coding MGP_129S1SvImJ_T0025984.1 MGP_129S1SvImJ_G0017420.1 mouse_genomes_project 10 78711493 78791862 - MGP_129S1SvImJ_P0025984 Agpat3 protein_coding protein_coding MGP_129S1SvImJ_T0025985.1 MGP_129S1SvImJ_G0017420.1 mouse_genomes_project 10 78711493 78791509 - MGP_129S1SvImJ_P0025985 Agpat3 protein_coding protein_coding MGP_129S1SvImJ_T0025986.1 MGP_129S1SvImJ_G0017420.1 mouse_genomes_project 10 78713541 78735325 - MGP_129S1SvImJ_P0025986 Agpat3 protein_coding protein_coding MGP_129S1SvImJ_T0025987.1 MGP_129S1SvImJ_G0017420.1 mouse_genomes_project 10 78713544 78718367 - Agpat3 protein_coding retained_intron MGP_129S1SvImJ_T0025988.1 MGP_129S1SvImJ_G0017420.1 mouse_genomes_project 10 78724197 78760601 - MGP_129S1SvImJ_P0025988 Agpat3 protein_coding protein_coding MGP_129S1SvImJ_T0025989.1 MGP_129S1SvImJ_G0017420.1 mouse_genomes_project 10 78724243 78747481 - MGP_129S1SvImJ_P0025989 Agpat3 protein_coding protein_coding MGP_129S1SvImJ_T0025990.1 MGP_129S1SvImJ_G0017420.1 mouse_genomes_project 10 78727785 78792298 - MGP_129S1SvImJ_P0025990 Agpat3 protein_coding protein_coding MGP_129S1SvImJ_T0025991.1 MGP_129S1SvImJ_G0017420.1 mouse_genomes_project 10 78727796 78792021 - MGP_129S1SvImJ_P0025991 Agpat3 protein_coding protein_coding MGP_129S1SvImJ_T0027319.1 MGP_129S1SvImJ_G0017805.1 mouse_genomes_project 10 130643305 130647015 - MGP_129S1SvImJ_P0027319 Tspan31 protein_coding protein_coding MGP_129S1SvImJ_T0025980.1 MGP_129S1SvImJ_G0017419.1 mouse_genomes_project 10 78623738 78684071 - MGP_129S1SvImJ_P0025980 Trappc10 protein_coding protein_coding MGP_129S1SvImJ_T0026939.1 MGP_129S1SvImJ_G0017665.1 mouse_genomes_project 10 96191289 96298493 + MGP_129S1SvImJ_P0026939 Cep83 protein_coding protein_coding MGP_129S1SvImJ_T0025181.1 MGP_129S1SvImJ_G0017220.1 mouse_genomes_project 10 51169036 51174948 + MGP_129S1SvImJ_P0025181 Vgll2 protein_coding protein_coding MGP_129S1SvImJ_T0025182.1 MGP_129S1SvImJ_G0017220.1 mouse_genomes_project 10 51169062 51174820 + MGP_129S1SvImJ_P0025182 Vgll2 protein_coding protein_coding MGP_129S1SvImJ_T0006094.1 MGP_129S1SvImJ_G0005103.1 mouse_genomes_project 10 14547699 14694430 - Gm20125 lincRNA lincRNA MGP_129S1SvImJ_T0003063.1 MGP_129S1SvImJ_G0002864.1 mouse_genomes_project 10 70215261 70215980 - Gm7097 antisense antisense MGP_129S1SvImJ_T0025221.1 MGP_129S1SvImJ_G0017237.1 mouse_genomes_project 10 56067316 56070437 + MGP_129S1SvImJ_P0025221 Gm9956 protein_coding protein_coding MGP_129S1SvImJ_T0026360.1 MGP_129S1SvImJ_G0017529.1 mouse_genomes_project 10 81603723 81605837 + MGP_129S1SvImJ_P0026360 Gadd45b protein_coding protein_coding MGP_129S1SvImJ_T0027598.1 MGP_129S1SvImJ_G0017917.1 mouse_genomes_project 10 133492262 133493195 - MGP_129S1SvImJ_P0027598 Olfr796 protein_coding protein_coding MGP_129S1SvImJ_T0027599.1 MGP_129S1SvImJ_G0017917.1 mouse_genomes_project 10 133492262 133496811 - MGP_129S1SvImJ_P0027599 Olfr796 protein_coding protein_coding MGP_129S1SvImJ_T0027165.1 MGP_129S1SvImJ_G0017759.1 mouse_genomes_project 10 120245720 120279867 - MGP_129S1SvImJ_P0027165 Cpsf6 protein_coding protein_coding MGP_129S1SvImJ_T0027166.1 MGP_129S1SvImJ_G0017759.1 mouse_genomes_project 10 120250086 120279870 - MGP_129S1SvImJ_P0027166 Cpsf6 protein_coding protein_coding MGP_129S1SvImJ_T0027167.1 MGP_129S1SvImJ_G0017759.1 mouse_genomes_project 10 120250089 120279826 - MGP_129S1SvImJ_P0027167 Cpsf6 protein_coding protein_coding MGP_129S1SvImJ_T0027168.1 MGP_129S1SvImJ_G0017759.1 mouse_genomes_project 10 120250421 120261951 - MGP_129S1SvImJ_P0027168 Cpsf6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027169.1 MGP_129S1SvImJ_G0017759.1 mouse_genomes_project 10 120254853 120279825 - MGP_129S1SvImJ_P0027169 Cpsf6 protein_coding protein_coding MGP_129S1SvImJ_T0027170.1 MGP_129S1SvImJ_G0017759.1 mouse_genomes_project 10 120256574 120257105 - MGP_129S1SvImJ_P0027170 Cpsf6 protein_coding protein_coding MGP_129S1SvImJ_T0027171.1 MGP_129S1SvImJ_G0017759.1 mouse_genomes_project 10 120259940 120264240 - Cpsf6 protein_coding retained_intron MGP_129S1SvImJ_T0027172.1 MGP_129S1SvImJ_G0017759.1 mouse_genomes_project 10 120267031 120282910 - MGP_129S1SvImJ_P0027172 Cpsf6 protein_coding protein_coding MGP_129S1SvImJ_T0017156.1 MGP_129S1SvImJ_G0015138.1 mouse_genomes_project 10 80407618 80411194 - E130317F20Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0003109.1 MGP_129S1SvImJ_G0002899.1 mouse_genomes_project 10 119191451 119194637 + Kcnmb4os1 antisense antisense MGP_129S1SvImJ_T0027050.1 MGP_129S1SvImJ_G0017714.1 mouse_genomes_project 10 110748646 111292965 - MGP_129S1SvImJ_P0027050 Syt1 protein_coding protein_coding MGP_129S1SvImJ_T0027051.1 MGP_129S1SvImJ_G0017714.1 mouse_genomes_project 10 110748650 111292972 - MGP_129S1SvImJ_P0027051 Syt1 protein_coding protein_coding MGP_129S1SvImJ_T0027052.1 MGP_129S1SvImJ_G0017714.1 mouse_genomes_project 10 110882366 110893339 - Syt1 protein_coding retained_intron MGP_129S1SvImJ_T0027053.1 MGP_129S1SvImJ_G0017714.1 mouse_genomes_project 10 110882422 111291096 - MGP_129S1SvImJ_P0027053 Syt1 protein_coding protein_coding MGP_129S1SvImJ_T0027054.1 MGP_129S1SvImJ_G0017714.1 mouse_genomes_project 10 111174652 111292952 - Syt1 protein_coding retained_intron MGP_129S1SvImJ_T0027055.1 MGP_129S1SvImJ_G0017714.1 mouse_genomes_project 10 111174869 111291085 - Syt1 protein_coding retained_intron MGP_129S1SvImJ_T0027519.1 MGP_129S1SvImJ_G0017871.1 mouse_genomes_project 10 132300184 132302703 - protein_coding retained_intron MGP_129S1SvImJ_T0027520.1 MGP_129S1SvImJ_G0017871.1 mouse_genomes_project 10 132302019 132302656 - protein_coding retained_intron MGP_129S1SvImJ_T0027386.1 MGP_129S1SvImJ_G0017827.1 mouse_genomes_project 10 131159697 131242448 - MGP_129S1SvImJ_P0027386 Lrp1 protein_coding protein_coding MGP_129S1SvImJ_T0027387.1 MGP_129S1SvImJ_G0017827.1 mouse_genomes_project 10 131160135 131161134 - Lrp1 protein_coding retained_intron MGP_129S1SvImJ_T0027388.1 MGP_129S1SvImJ_G0017827.1 mouse_genomes_project 10 131160771 131161679 - Lrp1 protein_coding retained_intron MGP_129S1SvImJ_T0027389.1 MGP_129S1SvImJ_G0017827.1 mouse_genomes_project 10 131163732 131164745 - Lrp1 protein_coding retained_intron MGP_129S1SvImJ_T0027390.1 MGP_129S1SvImJ_G0017827.1 mouse_genomes_project 10 131167931 131171454 - MGP_129S1SvImJ_P0027390 Lrp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027391.1 MGP_129S1SvImJ_G0017827.1 mouse_genomes_project 10 131199624 131203181 - Lrp1 protein_coding retained_intron MGP_129S1SvImJ_T0027392.1 MGP_129S1SvImJ_G0017827.1 mouse_genomes_project 10 131203024 131204756 - MGP_129S1SvImJ_P0027392 Lrp1 protein_coding protein_coding MGP_129S1SvImJ_T0027393.1 MGP_129S1SvImJ_G0017827.1 mouse_genomes_project 10 131208932 131242448 - Lrp1 protein_coding retained_intron MGP_129S1SvImJ_T0027394.1 MGP_129S1SvImJ_G0017827.1 mouse_genomes_project 10 131210461 131242270 - MGP_129S1SvImJ_P0027394 Lrp1 protein_coding protein_coding MGP_129S1SvImJ_T0027395.1 MGP_129S1SvImJ_G0017827.1 mouse_genomes_project 10 131221189 131242222 - MGP_129S1SvImJ_P0027395 Lrp1 protein_coding protein_coding MGP_129S1SvImJ_T0100409.1 MGP_129S1SvImJ_G0038476.1 mouse_genomes_project 10 8703583 8703721 - Gm25979 snoRNA snoRNA MGP_129S1SvImJ_T0006106.1 MGP_129S1SvImJ_G0005112.1 mouse_genomes_project 10 35778006 35820153 + Gm26535 lincRNA lincRNA MGP_129S1SvImJ_T0011301.1 MGP_129S1SvImJ_G0009417.1 mouse_genomes_project 10 93467114 93467240 - Gm27582 misc_RNA misc_RNA MGP_129S1SvImJ_T0024669.1 MGP_129S1SvImJ_G0017035.1 mouse_genomes_project 10 15720117 15797235 + MGP_129S1SvImJ_P0024669 Reps1 protein_coding protein_coding MGP_129S1SvImJ_T0024670.1 MGP_129S1SvImJ_G0017035.1 mouse_genomes_project 10 15720162 15797249 + MGP_129S1SvImJ_P0024670 Reps1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024671.1 MGP_129S1SvImJ_G0017035.1 mouse_genomes_project 10 15720196 15797260 + MGP_129S1SvImJ_P0024671 Reps1 protein_coding protein_coding MGP_129S1SvImJ_T0024672.1 MGP_129S1SvImJ_G0017035.1 mouse_genomes_project 10 15720219 15797247 + MGP_129S1SvImJ_P0024672 Reps1 protein_coding protein_coding MGP_129S1SvImJ_T0024673.1 MGP_129S1SvImJ_G0017035.1 mouse_genomes_project 10 15761419 15776455 + Reps1 protein_coding retained_intron MGP_129S1SvImJ_T0024674.1 MGP_129S1SvImJ_G0017035.1 mouse_genomes_project 10 15764761 15775616 + MGP_129S1SvImJ_P0024674 Reps1 protein_coding protein_coding MGP_129S1SvImJ_T0024675.1 MGP_129S1SvImJ_G0017035.1 mouse_genomes_project 10 15766121 15789163 + MGP_129S1SvImJ_P0024675 Reps1 protein_coding protein_coding MGP_129S1SvImJ_T0024676.1 MGP_129S1SvImJ_G0017035.1 mouse_genomes_project 10 15785911 15792842 + Reps1 protein_coding retained_intron MGP_129S1SvImJ_T0024677.1 MGP_129S1SvImJ_G0017035.1 mouse_genomes_project 10 15793584 15794510 + Reps1 protein_coding retained_intron MGP_129S1SvImJ_T0027357.1 MGP_129S1SvImJ_G0017821.1 mouse_genomes_project 10 130948750 130968282 - MGP_129S1SvImJ_P0027357 Inhbc protein_coding protein_coding MGP_129S1SvImJ_T0012412.1 MGP_129S1SvImJ_G0010501.1 mouse_genomes_project 10 22545997 22547789 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0025812.1 MGP_129S1SvImJ_G0017376.1 mouse_genomes_project 10 76272251 76327560 - MGP_129S1SvImJ_P0025812 Slc5a4b protein_coding protein_coding MGP_129S1SvImJ_T0098287.1 MGP_129S1SvImJ_G0036372.1 mouse_genomes_project 10 15674993 15675230 + pseudogene pseudogene MGP_129S1SvImJ_T0100454.1 MGP_129S1SvImJ_G0038521.1 mouse_genomes_project 10 108166033 108166155 - Gm25342 snoRNA snoRNA MGP_129S1SvImJ_T0025183.1 MGP_129S1SvImJ_G0017221.1 mouse_genomes_project 10 51192173 51331714 - MGP_129S1SvImJ_P0025183 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025184.1 MGP_129S1SvImJ_G0017221.1 mouse_genomes_project 10 51192378 51332002 - MGP_129S1SvImJ_P0025184 protein_coding protein_coding MGP_129S1SvImJ_T0025185.1 MGP_129S1SvImJ_G0017221.1 mouse_genomes_project 10 51192468 51331714 - MGP_129S1SvImJ_P0025185 protein_coding protein_coding MGP_129S1SvImJ_T0025186.1 MGP_129S1SvImJ_G0017221.1 mouse_genomes_project 10 51192468 51331714 - MGP_129S1SvImJ_P0025186 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026019.1 MGP_129S1SvImJ_G0017439.1 mouse_genomes_project 10 79534098 79562617 - MGP_129S1SvImJ_P0026019 2610008E11Rik protein_coding protein_coding MGP_129S1SvImJ_T0025064.1 MGP_129S1SvImJ_G0017179.1 mouse_genomes_project 10 40301118 40356586 - MGP_129S1SvImJ_P0025064 protein_coding protein_coding MGP_129S1SvImJ_T0027383.1 MGP_129S1SvImJ_G0017824.1 mouse_genomes_project 10 131135122 131137336 + MGP_129S1SvImJ_P0027383 Ndufa4l2 protein_coding protein_coding MGP_129S1SvImJ_T0099218.1 MGP_129S1SvImJ_G0037285.1 mouse_genomes_project 10 132745906 132746006 + Gm25494 snRNA snRNA MGP_129S1SvImJ_T0024517.1 MGP_129S1SvImJ_G0016997.1 mouse_genomes_project 10 4902015 4941255 + MGP_129S1SvImJ_P0024517 Lats1 protein_coding protein_coding MGP_129S1SvImJ_T0024518.1 MGP_129S1SvImJ_G0016997.1 mouse_genomes_project 10 4912050 4938385 + MGP_129S1SvImJ_P0024518 Lats1 protein_coding protein_coding MGP_129S1SvImJ_T0025348.1 MGP_129S1SvImJ_G0017271.1 mouse_genomes_project 10 59970514 60014466 - MGP_129S1SvImJ_P0025348 Slc29a3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025349.1 MGP_129S1SvImJ_G0017271.1 mouse_genomes_project 10 59971121 60015452 - MGP_129S1SvImJ_P0025349 Slc29a3 protein_coding protein_coding MGP_129S1SvImJ_T0025350.1 MGP_129S1SvImJ_G0017271.1 mouse_genomes_project 10 59971315 59980772 - Slc29a3 protein_coding retained_intron MGP_129S1SvImJ_T0025351.1 MGP_129S1SvImJ_G0017271.1 mouse_genomes_project 10 59977316 60014477 - Slc29a3 protein_coding processed_transcript MGP_129S1SvImJ_T0025320.1 MGP_129S1SvImJ_G0017267.1 mouse_genomes_project 10 59504201 59529149 + MGP_129S1SvImJ_P0025320 Psap protein_coding protein_coding MGP_129S1SvImJ_T0025321.1 MGP_129S1SvImJ_G0017267.1 mouse_genomes_project 10 59504202 59529152 + MGP_129S1SvImJ_P0025321 Psap protein_coding protein_coding MGP_129S1SvImJ_T0025322.1 MGP_129S1SvImJ_G0017267.1 mouse_genomes_project 10 59504202 59529152 + MGP_129S1SvImJ_P0025322 Psap protein_coding protein_coding MGP_129S1SvImJ_T0025323.1 MGP_129S1SvImJ_G0017267.1 mouse_genomes_project 10 59504202 59529152 + MGP_129S1SvImJ_P0025323 Psap protein_coding protein_coding MGP_129S1SvImJ_T0025324.1 MGP_129S1SvImJ_G0017267.1 mouse_genomes_project 10 59511019 59529152 + MGP_129S1SvImJ_P0025324 Psap protein_coding protein_coding MGP_129S1SvImJ_T0102121.1 MGP_129S1SvImJ_G0039956.1 mouse_genomes_project 10 133508520 133508935 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0027119.1 MGP_129S1SvImJ_G0017740.1 mouse_genomes_project 10 118285394 118298347 + MGP_129S1SvImJ_P0027119 A930009A15Rik protein_coding protein_coding MGP_129S1SvImJ_T0012425.1 MGP_129S1SvImJ_G0010514.1 mouse_genomes_project 10 42612657 42613662 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012455.1 MGP_129S1SvImJ_G0010544.1 mouse_genomes_project 10 107607341 107608265 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0026957.1 MGP_129S1SvImJ_G0017673.1 mouse_genomes_project 10 97561856 97671378 + MGP_129S1SvImJ_P0026957 Eea1 protein_coding protein_coding MGP_129S1SvImJ_T0026726.1 MGP_129S1SvImJ_G0017622.1 mouse_genomes_project 10 89160302 89214960 - MGP_129S1SvImJ_P0026726 Parpbp protein_coding protein_coding MGP_129S1SvImJ_T0026727.1 MGP_129S1SvImJ_G0017622.1 mouse_genomes_project 10 89194129 89214897 - MGP_129S1SvImJ_P0026727 Parpbp protein_coding protein_coding MGP_129S1SvImJ_T0026728.1 MGP_129S1SvImJ_G0017622.1 mouse_genomes_project 10 89194149 89214952 - MGP_129S1SvImJ_P0026728 Parpbp protein_coding protein_coding MGP_129S1SvImJ_T0026729.1 MGP_129S1SvImJ_G0017622.1 mouse_genomes_project 10 89200864 89214897 - MGP_129S1SvImJ_P0026729 Parpbp protein_coding protein_coding MGP_129S1SvImJ_T0027567.1 MGP_129S1SvImJ_G0017893.1 mouse_genomes_project 10 132794282 132795334 + MGP_129S1SvImJ_P0027567 Olfr9 protein_coding protein_coding MGP_129S1SvImJ_T0025063.1 MGP_129S1SvImJ_G0017178.1 mouse_genomes_project 10 40271537 40298078 - MGP_129S1SvImJ_P0025063 protein_coding protein_coding MGP_129S1SvImJ_T0024664.1 MGP_129S1SvImJ_G0017031.1 mouse_genomes_project 10 15366856 15369302 + MGP_129S1SvImJ_P0024664 Cited2 protein_coding protein_coding MGP_129S1SvImJ_T0011305.1 MGP_129S1SvImJ_G0009421.1 mouse_genomes_project 10 97194623 97194948 + Gm23776 misc_RNA misc_RNA MGP_129S1SvImJ_T0024752.1 MGP_129S1SvImJ_G0017059.1 mouse_genomes_project 10 19092621 19168417 + MGP_129S1SvImJ_P0024752 Hbs1l protein_coding protein_coding MGP_129S1SvImJ_T0024753.1 MGP_129S1SvImJ_G0017059.1 mouse_genomes_project 10 19092621 19107747 + MGP_129S1SvImJ_P0024753 Hbs1l protein_coding protein_coding MGP_129S1SvImJ_T0003037.1 MGP_129S1SvImJ_G0002845.1 mouse_genomes_project 10 25514442 25521803 + 4930579H20Rik antisense antisense MGP_129S1SvImJ_T0006130.1 MGP_129S1SvImJ_G0005132.1 mouse_genomes_project 10 78291288 78293986 + 1700009J07Rik lincRNA lincRNA MGP_129S1SvImJ_T0006131.1 MGP_129S1SvImJ_G0005132.1 mouse_genomes_project 10 78291291 78293983 + 1700009J07Rik lincRNA lincRNA MGP_129S1SvImJ_T0006132.1 MGP_129S1SvImJ_G0005132.1 mouse_genomes_project 10 78291299 78292383 + 1700009J07Rik lincRNA lincRNA MGP_129S1SvImJ_T0012463.1 MGP_129S1SvImJ_G0010552.1 mouse_genomes_project 10 131574359 131574651 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0027538.1 MGP_129S1SvImJ_G0017879.1 mouse_genomes_project 10 132475338 132492884 + MGP_129S1SvImJ_P0027538 Pmel protein_coding protein_coding MGP_129S1SvImJ_T0024947.1 MGP_129S1SvImJ_G0017144.1 mouse_genomes_project 10 35404598 35438297 + MGP_129S1SvImJ_P0024947 Hdac2 protein_coding protein_coding MGP_129S1SvImJ_T0024948.1 MGP_129S1SvImJ_G0017144.1 mouse_genomes_project 10 35404624 35426300 + MGP_129S1SvImJ_P0024948 Hdac2 protein_coding protein_coding MGP_129S1SvImJ_T0024949.1 MGP_129S1SvImJ_G0017144.1 mouse_genomes_project 10 35421820 35438296 + Hdac2 protein_coding processed_transcript MGP_129S1SvImJ_T0024950.1 MGP_129S1SvImJ_G0017144.1 mouse_genomes_project 10 35434579 35438019 + Hdac2 protein_coding retained_intron MGP_129S1SvImJ_T0026933.1 MGP_129S1SvImJ_G0017664.1 mouse_genomes_project 10 95791985 95909732 + Tmcc3 protein_coding retained_intron MGP_129S1SvImJ_T0026934.1 MGP_129S1SvImJ_G0017664.1 mouse_genomes_project 10 95792053 96063036 + MGP_129S1SvImJ_P0026934 Tmcc3 protein_coding protein_coding MGP_129S1SvImJ_T0026935.1 MGP_129S1SvImJ_G0017664.1 mouse_genomes_project 10 95792166 95854005 + Tmcc3 protein_coding processed_transcript MGP_129S1SvImJ_T0026936.1 MGP_129S1SvImJ_G0017664.1 mouse_genomes_project 10 95999543 96074092 + MGP_129S1SvImJ_P0026936 Tmcc3 protein_coding protein_coding MGP_129S1SvImJ_T0026937.1 MGP_129S1SvImJ_G0017664.1 mouse_genomes_project 10 96029743 96063162 + MGP_129S1SvImJ_P0026937 Tmcc3 protein_coding protein_coding MGP_129S1SvImJ_T0026938.1 MGP_129S1SvImJ_G0017664.1 mouse_genomes_project 10 96035156 96062907 + MGP_129S1SvImJ_P0026938 Tmcc3 protein_coding protein_coding MGP_129S1SvImJ_T0026407.1 MGP_129S1SvImJ_G0017542.1 mouse_genomes_project 10 81895379 81899247 - MGP_129S1SvImJ_P0026407 Nmrk2 protein_coding protein_coding MGP_129S1SvImJ_T0027492.1 MGP_129S1SvImJ_G0017862.1 mouse_genomes_project 10 132109777 132119206 + Ankrd52 protein_coding retained_intron MGP_129S1SvImJ_T0027493.1 MGP_129S1SvImJ_G0017862.1 mouse_genomes_project 10 132109781 132127714 + MGP_129S1SvImJ_P0027493 Ankrd52 protein_coding protein_coding MGP_129S1SvImJ_T0027494.1 MGP_129S1SvImJ_G0017862.1 mouse_genomes_project 10 132122994 132142381 + MGP_129S1SvImJ_P0027494 Ankrd52 protein_coding protein_coding MGP_129S1SvImJ_T0017125.1 MGP_129S1SvImJ_G0015130.1 mouse_genomes_project 10 4968662 4986953 - Gm20470 processed_transcript processed_transcript MGP_129S1SvImJ_T0027591.1 MGP_129S1SvImJ_G0017911.1 mouse_genomes_project 10 133347293 133348229 + MGP_129S1SvImJ_P0027591 Olfr788 protein_coding protein_coding MGP_129S1SvImJ_T0027258.1 MGP_129S1SvImJ_G0017787.1 mouse_genomes_project 10 125078957 125360404 - MGP_129S1SvImJ_P0027258 Srgap1 protein_coding protein_coding MGP_129S1SvImJ_T0027259.1 MGP_129S1SvImJ_G0017787.1 mouse_genomes_project 10 125078957 125360397 - MGP_129S1SvImJ_P0027259 Srgap1 protein_coding protein_coding MGP_129S1SvImJ_T0027260.1 MGP_129S1SvImJ_G0017787.1 mouse_genomes_project 10 125083197 125105037 - Srgap1 protein_coding processed_transcript MGP_129S1SvImJ_T0027261.1 MGP_129S1SvImJ_G0017787.1 mouse_genomes_project 10 125104571 125121258 - MGP_129S1SvImJ_P0027261 Srgap1 protein_coding protein_coding MGP_129S1SvImJ_T0027262.1 MGP_129S1SvImJ_G0017787.1 mouse_genomes_project 10 125200541 125360404 - Srgap1 protein_coding retained_intron MGP_129S1SvImJ_T0026266.1 MGP_129S1SvImJ_G0017499.1 mouse_genomes_project 10 80959572 80968387 + MGP_129S1SvImJ_P0026266 Plk5 protein_coding protein_coding MGP_129S1SvImJ_T0026267.1 MGP_129S1SvImJ_G0017499.1 mouse_genomes_project 10 80959572 80968387 + MGP_129S1SvImJ_P0026267 Plk5 protein_coding protein_coding MGP_129S1SvImJ_T0026268.1 MGP_129S1SvImJ_G0017499.1 mouse_genomes_project 10 80961090 80963641 + Plk5 protein_coding retained_intron MGP_129S1SvImJ_T0026269.1 MGP_129S1SvImJ_G0017499.1 mouse_genomes_project 10 80962383 80963899 + Plk5 protein_coding retained_intron MGP_129S1SvImJ_T0027103.1 MGP_129S1SvImJ_G0017734.1 mouse_genomes_project 10 117884989 117944519 - MGP_129S1SvImJ_P0027103 Tbc1d15 protein_coding protein_coding MGP_129S1SvImJ_T0026074.1 MGP_129S1SvImJ_G0017459.1 mouse_genomes_project 10 80320959 80326324 + MGP_129S1SvImJ_P0026074 Fstl3 protein_coding protein_coding MGP_129S1SvImJ_T0026075.1 MGP_129S1SvImJ_G0017459.1 mouse_genomes_project 10 80320979 80322787 + Fstl3 protein_coding retained_intron MGP_129S1SvImJ_T0026076.1 MGP_129S1SvImJ_G0017459.1 mouse_genomes_project 10 80324274 80326301 + Fstl3 protein_coding processed_transcript MGP_129S1SvImJ_T0009611.1 MGP_129S1SvImJ_G0007727.1 mouse_genomes_project 10 80061005 80061067 - Mir6909 miRNA miRNA MGP_129S1SvImJ_T0003082.1 MGP_129S1SvImJ_G0002879.1 mouse_genomes_project 10 82012773 82013990 - Gm16315 antisense antisense MGP_129S1SvImJ_T0027270.1 MGP_129S1SvImJ_G0017790.1 mouse_genomes_project 10 125997143 126210953 + Ppm1h protein_coding retained_intron MGP_129S1SvImJ_T0027271.1 MGP_129S1SvImJ_G0017790.1 mouse_genomes_project 10 125997159 126259668 + MGP_129S1SvImJ_P0027271 Ppm1h protein_coding protein_coding MGP_129S1SvImJ_T0027272.1 MGP_129S1SvImJ_G0017790.1 mouse_genomes_project 10 125997163 126283718 + MGP_129S1SvImJ_P0027272 Ppm1h protein_coding protein_coding MGP_129S1SvImJ_T0027273.1 MGP_129S1SvImJ_G0017790.1 mouse_genomes_project 10 126083453 126148095 + Ppm1h protein_coding processed_transcript MGP_129S1SvImJ_T0027274.1 MGP_129S1SvImJ_G0017790.1 mouse_genomes_project 10 126147867 126152277 + Ppm1h protein_coding retained_intron MGP_129S1SvImJ_T0027275.1 MGP_129S1SvImJ_G0017790.1 mouse_genomes_project 10 126148025 126277883 + Ppm1h protein_coding retained_intron MGP_129S1SvImJ_T0027276.1 MGP_129S1SvImJ_G0017790.1 mouse_genomes_project 10 126148070 126217927 + Ppm1h protein_coding processed_transcript MGP_129S1SvImJ_T0027277.1 MGP_129S1SvImJ_G0017790.1 mouse_genomes_project 10 126228496 126278044 + MGP_129S1SvImJ_P0027277 Ppm1h protein_coding protein_coding MGP_129S1SvImJ_T0006091.1 MGP_129S1SvImJ_G0005101.1 mouse_genomes_project 10 10304577 10311039 - B230208H11Rik lincRNA lincRNA MGP_129S1SvImJ_T0006092.1 MGP_129S1SvImJ_G0005101.1 mouse_genomes_project 10 10304608 10311029 - B230208H11Rik lincRNA lincRNA MGP_129S1SvImJ_T0024897.1 MGP_129S1SvImJ_G0017118.1 mouse_genomes_project 10 28858024 28870718 - MGP_129S1SvImJ_P0024897 Ncoa7 protein_coding protein_coding MGP_129S1SvImJ_T0024898.1 MGP_129S1SvImJ_G0017118.1 mouse_genomes_project 10 28858024 29030857 - MGP_129S1SvImJ_P0024898 Ncoa7 protein_coding protein_coding MGP_129S1SvImJ_T0024899.1 MGP_129S1SvImJ_G0017118.1 mouse_genomes_project 10 28862366 28995751 - MGP_129S1SvImJ_P0024899 Ncoa7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0025004.1 MGP_129S1SvImJ_G0017159.1 mouse_genomes_project 10 38577297 38683533 - MGP_129S1SvImJ_P0025004 Slc16a10 protein_coding protein_coding MGP_129S1SvImJ_T0027550.1 MGP_129S1SvImJ_G0017888.1 mouse_genomes_project 10 132707885 132713824 + MGP_129S1SvImJ_P0027550 Cd63 protein_coding protein_coding MGP_129S1SvImJ_T0027551.1 MGP_129S1SvImJ_G0017888.1 mouse_genomes_project 10 132708832 132713824 + MGP_129S1SvImJ_P0027551 Cd63 protein_coding protein_coding MGP_129S1SvImJ_T0027552.1 MGP_129S1SvImJ_G0017888.1 mouse_genomes_project 10 132708876 132713826 + MGP_129S1SvImJ_P0027552 Cd63 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0009648.1 MGP_129S1SvImJ_G0007764.1 mouse_genomes_project 10 130567348 130567432 + Mir26a-2 miRNA miRNA MGP_129S1SvImJ_T0027240.1 MGP_129S1SvImJ_G0017778.1 mouse_genomes_project 10 124133408 124198322 - MGP_129S1SvImJ_P0027240 Lemd3 protein_coding protein_coding MGP_129S1SvImJ_T0027241.1 MGP_129S1SvImJ_G0017778.1 mouse_genomes_project 10 124133847 124198322 - MGP_129S1SvImJ_P0027241 Lemd3 protein_coding protein_coding MGP_129S1SvImJ_T0025507.1 MGP_129S1SvImJ_G0017313.1 mouse_genomes_project 10 62616683 62710039 - MGP_129S1SvImJ_P0025507 Mypn protein_coding protein_coding MGP_129S1SvImJ_T0012461.1 MGP_129S1SvImJ_G0010550.1 mouse_genomes_project 10 125482625 125483586 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024513.1 MGP_129S1SvImJ_G0016996.1 mouse_genomes_project 10 4888375 4899688 + MGP_129S1SvImJ_P0024513 Nup43 protein_coding protein_coding MGP_129S1SvImJ_T0024514.1 MGP_129S1SvImJ_G0016996.1 mouse_genomes_project 10 4888386 4889164 + Nup43 protein_coding retained_intron MGP_129S1SvImJ_T0024515.1 MGP_129S1SvImJ_G0016996.1 mouse_genomes_project 10 4888412 4896887 + Nup43 protein_coding retained_intron MGP_129S1SvImJ_T0024516.1 MGP_129S1SvImJ_G0016996.1 mouse_genomes_project 10 4891647 4896061 + Nup43 protein_coding retained_intron MGP_129S1SvImJ_T0025846.1 MGP_129S1SvImJ_G0017387.1 mouse_genomes_project 10 76829174 76844586 + MGP_129S1SvImJ_P0025846 Ftcd protein_coding protein_coding MGP_129S1SvImJ_T0025847.1 MGP_129S1SvImJ_G0017387.1 mouse_genomes_project 10 76829176 76844337 + MGP_129S1SvImJ_P0025847 Ftcd protein_coding unknown_likely_coding MGP_129S1SvImJ_T0025848.1 MGP_129S1SvImJ_G0017387.1 mouse_genomes_project 10 76829178 76845363 + Ftcd protein_coding retained_intron MGP_129S1SvImJ_T0025849.1 MGP_129S1SvImJ_G0017387.1 mouse_genomes_project 10 76842157 76843593 + Ftcd protein_coding processed_transcript MGP_129S1SvImJ_T0027013.1 MGP_129S1SvImJ_G0017697.1 mouse_genomes_project 10 105037022 105063261 - MGP_129S1SvImJ_P0027013 Alx1 protein_coding protein_coding MGP_129S1SvImJ_T0027014.1 MGP_129S1SvImJ_G0017697.1 mouse_genomes_project 10 105037023 105063075 - MGP_129S1SvImJ_P0027014 Alx1 protein_coding protein_coding MGP_129S1SvImJ_T0027015.1 MGP_129S1SvImJ_G0017697.1 mouse_genomes_project 10 105037327 105055066 - Alx1 protein_coding processed_transcript MGP_129S1SvImJ_T0026050.1 MGP_129S1SvImJ_G0017452.1 mouse_genomes_project 10 80220494 80227086 + MGP_129S1SvImJ_P0026050 Cdc34 protein_coding protein_coding MGP_129S1SvImJ_T0026051.1 MGP_129S1SvImJ_G0017452.1 mouse_genomes_project 10 80220603 80227086 + MGP_129S1SvImJ_P0026051 Cdc34 protein_coding protein_coding MGP_129S1SvImJ_T0027525.1 MGP_129S1SvImJ_G0017874.1 mouse_genomes_project 10 132383083 132385060 - MGP_129S1SvImJ_P0027525 Rps26 protein_coding protein_coding MGP_129S1SvImJ_T0027603.1 MGP_129S1SvImJ_G0017920.1 mouse_genomes_project 10 133534529 133535465 + MGP_129S1SvImJ_P0027603 Olfr799 protein_coding protein_coding MGP_129S1SvImJ_T0024910.1 MGP_129S1SvImJ_G0017123.1 mouse_genomes_project 10 29722672 29842780 - MGP_129S1SvImJ_P0024910 Rnf217 protein_coding protein_coding MGP_129S1SvImJ_T0099168.1 MGP_129S1SvImJ_G0037235.1 mouse_genomes_project 10 37116481 37116588 - Gm22911 snRNA snRNA MGP_129S1SvImJ_T0027162.1 MGP_129S1SvImJ_G0017756.1 mouse_genomes_project 10 120112722 120119029 + MGP_129S1SvImJ_P0027162 Gm10936 protein_coding protein_coding MGP_129S1SvImJ_T0027431.1 MGP_129S1SvImJ_G0017843.1 mouse_genomes_project 10 131653791 131674342 - MGP_129S1SvImJ_P0027431 Hsd17b6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0027089.1 MGP_129S1SvImJ_G0017725.1 mouse_genomes_project 10 114535268 114570787 + MGP_129S1SvImJ_P0027089 Glipr1l1 protein_coding protein_coding MGP_129S1SvImJ_T0026959.1 MGP_129S1SvImJ_G0017675.1 mouse_genomes_project 10 99201578 99250408 + MGP_129S1SvImJ_P0026959 Dcn protein_coding protein_coding MGP_129S1SvImJ_T0026960.1 MGP_129S1SvImJ_G0017675.1 mouse_genomes_project 10 99204428 99250408 + MGP_129S1SvImJ_P0026960 Dcn protein_coding protein_coding MGP_129S1SvImJ_T0025416.1 MGP_129S1SvImJ_G0017292.1 mouse_genomes_project 10 61526066 61527740 + MGP_129S1SvImJ_P0025416 Neurog3 protein_coding protein_coding MGP_129S1SvImJ_T0025929.1 MGP_129S1SvImJ_G0017409.1 mouse_genomes_project 10 78213676 78279199 + MGP_129S1SvImJ_P0025929 Tspear protein_coding protein_coding MGP_129S1SvImJ_T0025930.1 MGP_129S1SvImJ_G0017409.1 mouse_genomes_project 10 78213741 78284484 + MGP_129S1SvImJ_P0025930 Tspear protein_coding protein_coding MGP_129S1SvImJ_T0025931.1 MGP_129S1SvImJ_G0017409.1 mouse_genomes_project 10 78259986 78263406 + Tspear protein_coding retained_intron MGP_129S1SvImJ_T0011286.1 MGP_129S1SvImJ_G0009402.1 mouse_genomes_project 10 10485302 10485539 - Gm27741 misc_RNA misc_RNA MGP_129S1SvImJ_T0024622.1 MGP_129S1SvImJ_G0017022.1 mouse_genomes_project 10 10911665 10913297 + MGP_129S1SvImJ_P0024622 Fuca2 protein_coding protein_coding MGP_129S1SvImJ_T0024623.1 MGP_129S1SvImJ_G0017022.1 mouse_genomes_project 10 10911669 10918870 + MGP_129S1SvImJ_P0024623 Fuca2 protein_coding protein_coding MGP_129S1SvImJ_T0024624.1 MGP_129S1SvImJ_G0017022.1 mouse_genomes_project 10 10913120 10928479 + MGP_129S1SvImJ_P0024624 Fuca2 protein_coding protein_coding MGP_129S1SvImJ_T0024625.1 MGP_129S1SvImJ_G0017022.1 mouse_genomes_project 10 10913120 10931974 + MGP_129S1SvImJ_P0024625 Fuca2 protein_coding protein_coding MGP_129S1SvImJ_T0024626.1 MGP_129S1SvImJ_G0017022.1 mouse_genomes_project 10 10913203 10926034 + Fuca2 protein_coding retained_intron MGP_129S1SvImJ_T0024627.1 MGP_129S1SvImJ_G0017022.1 mouse_genomes_project 10 10919026 10928434 + Fuca2 protein_coding processed_transcript MGP_129S1SvImJ_T0025866.1 MGP_129S1SvImJ_G0017392.1 mouse_genomes_project 10 77305589 77315710 + MGP_129S1SvImJ_P0025866 Slc19a1 protein_coding protein_coding MGP_129S1SvImJ_T0025867.1 MGP_129S1SvImJ_G0017392.1 mouse_genomes_project 10 77305619 77315196 + MGP_129S1SvImJ_P0025867 Slc19a1 protein_coding protein_coding MGP_129S1SvImJ_T0025868.1 MGP_129S1SvImJ_G0017392.1 mouse_genomes_project 10 77306032 77323781 + MGP_129S1SvImJ_P0025868 Slc19a1 protein_coding protein_coding MGP_129S1SvImJ_T0025869.1 MGP_129S1SvImJ_G0017392.1 mouse_genomes_project 10 77306560 77323780 + MGP_129S1SvImJ_P0025869 Slc19a1 protein_coding protein_coding MGP_129S1SvImJ_T0025870.1 MGP_129S1SvImJ_G0017392.1 mouse_genomes_project 10 77306616 77319617 + MGP_129S1SvImJ_P0025870 Slc19a1 protein_coding protein_coding MGP_129S1SvImJ_T0025871.1 MGP_129S1SvImJ_G0017392.1 mouse_genomes_project 10 77306629 77316305 + MGP_129S1SvImJ_P0025871 Slc19a1 protein_coding protein_coding MGP_129S1SvImJ_T0025872.1 MGP_129S1SvImJ_G0017392.1 mouse_genomes_project 10 77306667 77315679 + MGP_129S1SvImJ_P0025872 Slc19a1 protein_coding protein_coding MGP_129S1SvImJ_T0025873.1 MGP_129S1SvImJ_G0017392.1 mouse_genomes_project 10 77315848 77318247 + Slc19a1 protein_coding retained_intron MGP_129S1SvImJ_T0025874.1 MGP_129S1SvImJ_G0017392.1 mouse_genomes_project 10 77316139 77334351 + MGP_129S1SvImJ_P0025874 Slc19a1 protein_coding protein_coding MGP_129S1SvImJ_T0025265.1 MGP_129S1SvImJ_G0017251.1 mouse_genomes_project 10 57839061 57843666 - MGP_129S1SvImJ_P0025265 Gm17542 protein_coding protein_coding MGP_129S1SvImJ_T0026529.1 MGP_129S1SvImJ_G0017567.1 mouse_genomes_project 10 82322726 82331564 - Tle6 protein_coding processed_transcript MGP_129S1SvImJ_T0026530.1 MGP_129S1SvImJ_G0017567.1 mouse_genomes_project 10 82322726 82337145 - MGP_129S1SvImJ_P0026530 Tle6 protein_coding protein_coding MGP_129S1SvImJ_T0026531.1 MGP_129S1SvImJ_G0017567.1 mouse_genomes_project 10 82322727 82327238 - Tle6 protein_coding retained_intron MGP_129S1SvImJ_T0026532.1 MGP_129S1SvImJ_G0017567.1 mouse_genomes_project 10 82322727 82324538 - Tle6 protein_coding processed_transcript MGP_129S1SvImJ_T0026533.1 MGP_129S1SvImJ_G0017567.1 mouse_genomes_project 10 82322727 82337170 - MGP_129S1SvImJ_P0026533 Tle6 protein_coding protein_coding MGP_129S1SvImJ_T0026534.1 MGP_129S1SvImJ_G0017567.1 mouse_genomes_project 10 82322729 82331319 - Tle6 protein_coding processed_transcript MGP_129S1SvImJ_T0026535.1 MGP_129S1SvImJ_G0017567.1 mouse_genomes_project 10 82322955 82324641 - Tle6 protein_coding retained_intron MGP_129S1SvImJ_T0026536.1 MGP_129S1SvImJ_G0017567.1 mouse_genomes_project 10 82325741 82327067 - Tle6 protein_coding retained_intron MGP_129S1SvImJ_T0026537.1 MGP_129S1SvImJ_G0017567.1 mouse_genomes_project 10 82326061 82327631 - Tle6 protein_coding retained_intron MGP_129S1SvImJ_T0026538.1 MGP_129S1SvImJ_G0017567.1 mouse_genomes_project 10 82327031 82331312 - Tle6 protein_coding processed_transcript MGP_129S1SvImJ_T0026539.1 MGP_129S1SvImJ_G0017567.1 mouse_genomes_project 10 82327051 82331305 - Tle6 protein_coding processed_transcript MGP_129S1SvImJ_T0026540.1 MGP_129S1SvImJ_G0017567.1 mouse_genomes_project 10 82327775 82331341 - Tle6 protein_coding processed_transcript MGP_129S1SvImJ_T0026541.1 MGP_129S1SvImJ_G0017567.1 mouse_genomes_project 10 82327815 82337127 - MGP_129S1SvImJ_P0026541 Tle6 protein_coding protein_coding MGP_129S1SvImJ_T0026542.1 MGP_129S1SvImJ_G0017567.1 mouse_genomes_project 10 82327818 82337343 - MGP_129S1SvImJ_P0026542 Tle6 protein_coding protein_coding MGP_129S1SvImJ_T0027097.1 MGP_129S1SvImJ_G0017731.1 mouse_genomes_project 10 116345282 116345661 - MGP_129S1SvImJ_P0027097 protein_coding protein_coding MGP_129S1SvImJ_T0027135.1 MGP_129S1SvImJ_G0017746.1 mouse_genomes_project 10 119265099 119365436 - MGP_129S1SvImJ_P0027135 Cnot2 protein_coding protein_coding MGP_129S1SvImJ_T0027136.1 MGP_129S1SvImJ_G0017746.1 mouse_genomes_project 10 119265103 119365421 - MGP_129S1SvImJ_P0027136 Cnot2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027137.1 MGP_129S1SvImJ_G0017746.1 mouse_genomes_project 10 119265103 119330175 - MGP_129S1SvImJ_P0027137 Cnot2 protein_coding protein_coding MGP_129S1SvImJ_T0027138.1 MGP_129S1SvImJ_G0017746.1 mouse_genomes_project 10 119265104 119365425 - MGP_129S1SvImJ_P0027138 Cnot2 protein_coding protein_coding MGP_129S1SvImJ_T0027139.1 MGP_129S1SvImJ_G0017746.1 mouse_genomes_project 10 119265725 119365436 - MGP_129S1SvImJ_P0027139 Cnot2 protein_coding protein_coding MGP_129S1SvImJ_T0027140.1 MGP_129S1SvImJ_G0017746.1 mouse_genomes_project 10 119266135 119365427 - MGP_129S1SvImJ_P0027140 Cnot2 protein_coding protein_coding MGP_129S1SvImJ_T0027141.1 MGP_129S1SvImJ_G0017746.1 mouse_genomes_project 10 119266138 119318253 - MGP_129S1SvImJ_P0027141 Cnot2 protein_coding protein_coding MGP_129S1SvImJ_T0027142.1 MGP_129S1SvImJ_G0017746.1 mouse_genomes_project 10 119278532 119365408 - Cnot2 protein_coding processed_transcript MGP_129S1SvImJ_T0027143.1 MGP_129S1SvImJ_G0017746.1 mouse_genomes_project 10 119278782 119365418 - Cnot2 protein_coding processed_transcript MGP_129S1SvImJ_T0027144.1 MGP_129S1SvImJ_G0017746.1 mouse_genomes_project 10 119279813 119365415 - Cnot2 protein_coding processed_transcript MGP_129S1SvImJ_T0027145.1 MGP_129S1SvImJ_G0017746.1 mouse_genomes_project 10 119279818 119365410 - Cnot2 protein_coding processed_transcript MGP_129S1SvImJ_T0027146.1 MGP_129S1SvImJ_G0017746.1 mouse_genomes_project 10 119285521 119365390 - MGP_129S1SvImJ_P0027146 Cnot2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027147.1 MGP_129S1SvImJ_G0017746.1 mouse_genomes_project 10 119287862 119365416 - Cnot2 protein_coding processed_transcript MGP_129S1SvImJ_T0027148.1 MGP_129S1SvImJ_G0017746.1 mouse_genomes_project 10 119291272 119365421 - Cnot2 protein_coding processed_transcript MGP_129S1SvImJ_T0027149.1 MGP_129S1SvImJ_G0017746.1 mouse_genomes_project 10 119291272 119365436 - MGP_129S1SvImJ_P0027149 Cnot2 protein_coding protein_coding MGP_129S1SvImJ_T0027150.1 MGP_129S1SvImJ_G0017746.1 mouse_genomes_project 10 119291641 119365408 - Cnot2 protein_coding processed_transcript MGP_129S1SvImJ_T0024680.1 MGP_129S1SvImJ_G0017037.1 mouse_genomes_project 10 15883208 15906663 - MGP_129S1SvImJ_P0024680 Ccdc28a protein_coding protein_coding MGP_129S1SvImJ_T0024681.1 MGP_129S1SvImJ_G0017037.1 mouse_genomes_project 10 15883214 15900789 - MGP_129S1SvImJ_P0024681 Ccdc28a protein_coding protein_coding MGP_129S1SvImJ_T0024682.1 MGP_129S1SvImJ_G0017037.1 mouse_genomes_project 10 15883307 15885868 - Ccdc28a protein_coding retained_intron MGP_129S1SvImJ_T0024683.1 MGP_129S1SvImJ_G0017037.1 mouse_genomes_project 10 15883590 15889153 - MGP_129S1SvImJ_P0024683 Ccdc28a protein_coding protein_coding MGP_129S1SvImJ_T0024684.1 MGP_129S1SvImJ_G0017037.1 mouse_genomes_project 10 15883610 15906665 - MGP_129S1SvImJ_P0024684 Ccdc28a protein_coding protein_coding MGP_129S1SvImJ_T0024685.1 MGP_129S1SvImJ_G0017037.1 mouse_genomes_project 10 15886316 15906645 - MGP_129S1SvImJ_P0024685 Ccdc28a protein_coding protein_coding MGP_129S1SvImJ_T0025660.1 MGP_129S1SvImJ_G0017344.1 mouse_genomes_project 10 71323370 71339282 - MGP_129S1SvImJ_P0025660 Cisd1 protein_coding protein_coding MGP_129S1SvImJ_T0027452.1 MGP_129S1SvImJ_G0017848.1 mouse_genomes_project 10 131769386 131808145 + MGP_129S1SvImJ_P0027452 Baz2a protein_coding protein_coding MGP_129S1SvImJ_T0027453.1 MGP_129S1SvImJ_G0017848.1 mouse_genomes_project 10 131773420 131804168 + MGP_129S1SvImJ_P0027453 Baz2a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0009647.1 MGP_129S1SvImJ_G0007763.1 mouse_genomes_project 10 130252219 130252329 - Mir378d miRNA miRNA MGP_129S1SvImJ_T0100406.1 MGP_129S1SvImJ_G0038473.1 mouse_genomes_project 10 6100487 6100624 - Gm25410 snoRNA snoRNA MGP_129S1SvImJ_T0025640.1 MGP_129S1SvImJ_G0017339.1 mouse_genomes_project 10 70503360 70544504 - MGP_129S1SvImJ_P0025640 Phyhipl protein_coding protein_coding MGP_129S1SvImJ_T0025641.1 MGP_129S1SvImJ_G0017339.1 mouse_genomes_project 10 70503816 70603252 - MGP_129S1SvImJ_P0025641 Phyhipl protein_coding protein_coding MGP_129S1SvImJ_T0025642.1 MGP_129S1SvImJ_G0017339.1 mouse_genomes_project 10 70507978 70544479 - Phyhipl protein_coding retained_intron MGP_129S1SvImJ_T0025643.1 MGP_129S1SvImJ_G0017339.1 mouse_genomes_project 10 70511934 70544687 - Phyhipl protein_coding retained_intron MGP_129S1SvImJ_T0025644.1 MGP_129S1SvImJ_G0017339.1 mouse_genomes_project 10 70515022 70603259 - MGP_129S1SvImJ_P0025644 Phyhipl protein_coding protein_coding MGP_129S1SvImJ_T0025645.1 MGP_129S1SvImJ_G0017339.1 mouse_genomes_project 10 70546445 70599219 - Phyhipl protein_coding processed_transcript MGP_129S1SvImJ_T0025646.1 MGP_129S1SvImJ_G0017339.1 mouse_genomes_project 10 70546529 70603257 - Phyhipl protein_coding processed_transcript MGP_129S1SvImJ_T0025647.1 MGP_129S1SvImJ_G0017339.1 mouse_genomes_project 10 70552484 70552959 - Phyhipl protein_coding processed_transcript MGP_129S1SvImJ_T0025648.1 MGP_129S1SvImJ_G0017339.1 mouse_genomes_project 10 70552994 70571675 - Phyhipl protein_coding processed_transcript MGP_129S1SvImJ_T0025481.1 MGP_129S1SvImJ_G0017308.1 mouse_genomes_project 10 62431487 62461811 + MGP_129S1SvImJ_P0025481 Dna2 protein_coding protein_coding MGP_129S1SvImJ_T0025482.1 MGP_129S1SvImJ_G0017308.1 mouse_genomes_project 10 62431536 62461393 + MGP_129S1SvImJ_P0025482 Dna2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025483.1 MGP_129S1SvImJ_G0017308.1 mouse_genomes_project 10 62431541 62434093 + Dna2 protein_coding retained_intron MGP_129S1SvImJ_T0025484.1 MGP_129S1SvImJ_G0017308.1 mouse_genomes_project 10 62431571 62454009 + Dna2 protein_coding retained_intron MGP_129S1SvImJ_T0025485.1 MGP_129S1SvImJ_G0017308.1 mouse_genomes_project 10 62453563 62461810 + Dna2 protein_coding retained_intron MGP_129S1SvImJ_T0025486.1 MGP_129S1SvImJ_G0017308.1 mouse_genomes_project 10 62453858 62461805 + Dna2 protein_coding retained_intron MGP_129S1SvImJ_T0017127.1 MGP_129S1SvImJ_G0015132.1 mouse_genomes_project 10 22525146 22526045 - Gm15270 processed_transcript processed_transcript MGP_129S1SvImJ_T0017128.1 MGP_129S1SvImJ_G0015132.1 mouse_genomes_project 10 22525152 22576723 - Gm15270 processed_transcript processed_transcript MGP_129S1SvImJ_T0017129.1 MGP_129S1SvImJ_G0015132.1 mouse_genomes_project 10 22559669 22574637 - Gm15270 processed_transcript processed_transcript MGP_129S1SvImJ_T0017130.1 MGP_129S1SvImJ_G0015132.1 mouse_genomes_project 10 22576152 22578016 - Gm15270 processed_transcript processed_transcript MGP_129S1SvImJ_T0026611.1 MGP_129S1SvImJ_G0017585.1 mouse_genomes_project 10 84165114 84173654 + MGP_129S1SvImJ_P0026611 D10Wsu102e protein_coding protein_coding MGP_129S1SvImJ_T0026108.1 MGP_129S1SvImJ_G0017465.1 mouse_genomes_project 10 80429624 80442937 + Prtn3 protein_coding processed_transcript MGP_129S1SvImJ_T0026109.1 MGP_129S1SvImJ_G0017465.1 mouse_genomes_project 10 80439515 80443070 + MGP_129S1SvImJ_P0026109 Prtn3 protein_coding protein_coding MGP_129S1SvImJ_T0026110.1 MGP_129S1SvImJ_G0017465.1 mouse_genomes_project 10 80440875 80443070 + Prtn3 protein_coding retained_intron MGP_129S1SvImJ_T0026111.1 MGP_129S1SvImJ_G0017465.1 mouse_genomes_project 10 80440899 80442285 + Prtn3 protein_coding retained_intron MGP_129S1SvImJ_T0026112.1 MGP_129S1SvImJ_G0017465.1 mouse_genomes_project 10 80440937 80442740 + MGP_129S1SvImJ_P0026112 Prtn3 protein_coding protein_coding MGP_129S1SvImJ_T0026113.1 MGP_129S1SvImJ_G0017465.1 mouse_genomes_project 10 80441678 80442776 + Prtn3 protein_coding retained_intron MGP_129S1SvImJ_T0011287.1 MGP_129S1SvImJ_G0009403.1 mouse_genomes_project 10 23303096 23303349 - Gm26167 misc_RNA misc_RNA MGP_129S1SvImJ_T0099204.1 MGP_129S1SvImJ_G0037271.1 mouse_genomes_project 10 106294868 106294930 - Gm22339 snRNA snRNA MGP_129S1SvImJ_T0009622.1 MGP_129S1SvImJ_G0007738.1 mouse_genomes_project 10 86194526 86194627 - Gm27392 miRNA miRNA MGP_129S1SvImJ_T0100432.1 MGP_129S1SvImJ_G0038499.1 mouse_genomes_project 10 47400442 47400571 + Gm23584 snoRNA snoRNA MGP_129S1SvImJ_T0027286.1 MGP_129S1SvImJ_G0017796.1 mouse_genomes_project 10 130425695 130460126 - MGP_129S1SvImJ_P0027286 Xrcc6bp1 protein_coding protein_coding MGP_129S1SvImJ_T0027287.1 MGP_129S1SvImJ_G0017796.1 mouse_genomes_project 10 130444404 130460126 - MGP_129S1SvImJ_P0027287 Xrcc6bp1 protein_coding protein_coding MGP_129S1SvImJ_T0006134.1 MGP_129S1SvImJ_G0005134.1 mouse_genomes_project 10 81320875 81327243 + Gm26541 lincRNA lincRNA MGP_129S1SvImJ_T0099193.1 MGP_129S1SvImJ_G0037260.1 mouse_genomes_project 10 85487557 85487652 + Gm25657 snRNA snRNA MGP_129S1SvImJ_T0025525.1 MGP_129S1SvImJ_G0017319.1 mouse_genomes_project 10 63469063 63471632 - MGP_129S1SvImJ_P0025525 Gm10118 protein_coding protein_coding MGP_129S1SvImJ_T0025649.1 MGP_129S1SvImJ_G0017340.1 mouse_genomes_project 10 70819719 70886185 + MGP_129S1SvImJ_P0025649 4930533K18Rik protein_coding protein_coding MGP_129S1SvImJ_T0006139.1 MGP_129S1SvImJ_G0005138.1 mouse_genomes_project 10 85420230 85426215 - Platr7 lincRNA lincRNA MGP_129S1SvImJ_T0024786.1 MGP_129S1SvImJ_G0017072.1 mouse_genomes_project 10 21701332 21707457 - MGP_129S1SvImJ_P0024786 Rps12 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0024787.1 MGP_129S1SvImJ_G0017072.1 mouse_genomes_project 10 21705660 21709160 - MGP_129S1SvImJ_P0024787 Rps12 protein_coding protein_coding MGP_129S1SvImJ_T0024925.1 MGP_129S1SvImJ_G0017132.1 mouse_genomes_project 10 32326526 32350219 - MGP_129S1SvImJ_P0024925 Rwdd1 protein_coding protein_coding MGP_129S1SvImJ_T0024926.1 MGP_129S1SvImJ_G0017132.1 mouse_genomes_project 10 32326532 32331219 - Rwdd1 protein_coding retained_intron MGP_129S1SvImJ_T0099186.1 MGP_129S1SvImJ_G0037253.1 mouse_genomes_project 10 66981733 66981834 - Gm26359 snRNA snRNA MGP_129S1SvImJ_T0025833.1 MGP_129S1SvImJ_G0017382.1 mouse_genomes_project 10 76687599 76699981 + MGP_129S1SvImJ_P0025833 2610028H24Rik protein_coding protein_coding MGP_129S1SvImJ_T0026651.1 MGP_129S1SvImJ_G0017598.1 mouse_genomes_project 10 86021082 86029675 - MGP_129S1SvImJ_P0026651 Mterf2 protein_coding protein_coding MGP_129S1SvImJ_T0006162.1 MGP_129S1SvImJ_G0005148.1 mouse_genomes_project 10 96172436 96191113 - Cep83os lincRNA lincRNA MGP_129S1SvImJ_T0026647.1 MGP_129S1SvImJ_G0017595.1 mouse_genomes_project 10 85807970 85906789 + MGP_129S1SvImJ_P0026647 Ric8b protein_coding protein_coding MGP_129S1SvImJ_T0026648.1 MGP_129S1SvImJ_G0017595.1 mouse_genomes_project 10 85808010 85906789 + MGP_129S1SvImJ_P0026648 Ric8b protein_coding protein_coding MGP_129S1SvImJ_T0027617.1 MGP_129S1SvImJ_G0017928.1 mouse_genomes_project 10 133652157 133653154 - MGP_129S1SvImJ_P0027617 Olfr807 protein_coding protein_coding MGP_129S1SvImJ_T0012443.1 MGP_129S1SvImJ_G0010532.1 mouse_genomes_project 10 75793860 75794284 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006113.1 MGP_129S1SvImJ_G0005119.1 mouse_genomes_project 10 60211289 60222366 - Pldi lincRNA lincRNA MGP_129S1SvImJ_T0098700.1 MGP_129S1SvImJ_G0036785.1 mouse_genomes_project 10 2096749 2097031 - Gm25694 ribozyme ribozyme MGP_129S1SvImJ_T0027152.1 MGP_129S1SvImJ_G0017748.1 mouse_genomes_project 10 119708736 119760631 - MGP_129S1SvImJ_P0027152 Rab3ip protein_coding protein_coding MGP_129S1SvImJ_T0027153.1 MGP_129S1SvImJ_G0017748.1 mouse_genomes_project 10 119711142 119760673 - MGP_129S1SvImJ_P0027153 Rab3ip protein_coding unknown_likely_coding MGP_129S1SvImJ_T0003048.1 MGP_129S1SvImJ_G0002852.1 mouse_genomes_project 10 41425100 41425583 - Gm15200 antisense antisense MGP_129S1SvImJ_T0027582.1 MGP_129S1SvImJ_G0017905.1 mouse_genomes_project 10 133124856 133127021 - MGP_129S1SvImJ_P0027582 Olfr777 protein_coding protein_coding MGP_129S1SvImJ_T0027583.1 MGP_129S1SvImJ_G0017905.1 mouse_genomes_project 10 133124856 133125792 - MGP_129S1SvImJ_P0027583 Olfr777 protein_coding protein_coding MGP_129S1SvImJ_T0009604.1 MGP_129S1SvImJ_G0007720.1 mouse_genomes_project 10 76433384 76433468 - Mir678 miRNA miRNA MGP_129S1SvImJ_T0006182.1 MGP_129S1SvImJ_G0005162.1 mouse_genomes_project 10 130777677 130786102 + F420014N23Rik lincRNA lincRNA MGP_129S1SvImJ_T0027604.1 MGP_129S1SvImJ_G0017921.1 mouse_genomes_project 10 133547211 133548147 + MGP_129S1SvImJ_P0027604 Olfr800 protein_coding protein_coding MGP_129S1SvImJ_T0024803.1 MGP_129S1SvImJ_G0017084.1 mouse_genomes_project 10 21969401 21970478 + MGP_129S1SvImJ_P0024803 Taar7d protein_coding protein_coding MGP_129S1SvImJ_T0099176.1 MGP_129S1SvImJ_G0037243.1 mouse_genomes_project 10 47593094 47593178 - Gm24256 snRNA snRNA MGP_129S1SvImJ_T0003120.1 MGP_129S1SvImJ_G0002905.1 mouse_genomes_project 10 123551042 123554303 + 9230105E05Rik antisense antisense MGP_129S1SvImJ_T0025384.1 MGP_129S1SvImJ_G0017284.1 mouse_genomes_project 10 61009036 61035833 + MGP_129S1SvImJ_P0025384 Ppa1 protein_coding protein_coding MGP_129S1SvImJ_T0025385.1 MGP_129S1SvImJ_G0017284.1 mouse_genomes_project 10 61009105 61013305 + Ppa1 protein_coding retained_intron MGP_129S1SvImJ_T0025386.1 MGP_129S1SvImJ_G0017284.1 mouse_genomes_project 10 61024352 61027090 + Ppa1 protein_coding processed_transcript MGP_129S1SvImJ_T0025387.1 MGP_129S1SvImJ_G0017284.1 mouse_genomes_project 10 61025353 61027270 + Ppa1 protein_coding retained_intron MGP_129S1SvImJ_T0011291.1 MGP_129S1SvImJ_G0009407.1 mouse_genomes_project 10 49960909 49961199 - Gm23883 misc_RNA misc_RNA MGP_129S1SvImJ_T0025562.1 MGP_129S1SvImJ_G0017329.1 mouse_genomes_project 10 67887289 68085290 - MGP_129S1SvImJ_P0025562 Arid5b protein_coding protein_coding MGP_129S1SvImJ_T0026892.1 MGP_129S1SvImJ_G0017655.1 mouse_genomes_project 10 95013822 95028316 + MGP_129S1SvImJ_P0026892 4933408J17Rik protein_coding protein_coding MGP_129S1SvImJ_T0027535.1 MGP_129S1SvImJ_G0017877.1 mouse_genomes_project 10 132442381 132446100 - MGP_129S1SvImJ_P0027535 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0024495.1 MGP_129S1SvImJ_G0016992.1 mouse_genomes_project 10 4278977 4295443 - MGP_129S1SvImJ_P0024495 Cnksr3 protein_coding protein_coding MGP_129S1SvImJ_T0024496.1 MGP_129S1SvImJ_G0016992.1 mouse_genomes_project 10 4278977 4377056 - MGP_129S1SvImJ_P0024496 Cnksr3 protein_coding protein_coding MGP_129S1SvImJ_T0099153.1 MGP_129S1SvImJ_G0037220.1 mouse_genomes_project 10 1493211 1493371 + Gm22739 snRNA snRNA MGP_129S1SvImJ_T0026404.1 MGP_129S1SvImJ_G0017539.1 mouse_genomes_project 10 81873647 81880063 + MGP_129S1SvImJ_P0026404 Eef2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0003113.1 MGP_129S1SvImJ_G0002901.1 mouse_genomes_project 10 122517620 122543100 - Grip1os3 antisense antisense MGP_129S1SvImJ_T0003114.1 MGP_129S1SvImJ_G0002901.1 mouse_genomes_project 10 122527047 122543050 - Grip1os3 antisense antisense MGP_129S1SvImJ_T0003115.1 MGP_129S1SvImJ_G0002901.1 mouse_genomes_project 10 122527047 122543649 - Grip1os3 antisense antisense MGP_129S1SvImJ_T0024808.1 MGP_129S1SvImJ_G0017089.1 mouse_genomes_project 10 22059308 22060355 - MGP_129S1SvImJ_P0024808 Taar9 protein_coding protein_coding MGP_129S1SvImJ_T0025895.1 MGP_129S1SvImJ_G0017397.1 mouse_genomes_project 10 77804697 77835714 - MGP_129S1SvImJ_P0025895 Fam207a protein_coding protein_coding MGP_129S1SvImJ_T0025814.1 MGP_129S1SvImJ_G0017378.1 mouse_genomes_project 10 76433280 76466031 - MGP_129S1SvImJ_P0025814 Prmt2 protein_coding protein_coding MGP_129S1SvImJ_T0025815.1 MGP_129S1SvImJ_G0017378.1 mouse_genomes_project 10 76433285 76466003 - MGP_129S1SvImJ_P0025815 Prmt2 protein_coding protein_coding MGP_129S1SvImJ_T0025816.1 MGP_129S1SvImJ_G0017378.1 mouse_genomes_project 10 76433290 76465996 - MGP_129S1SvImJ_P0025816 Prmt2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025817.1 MGP_129S1SvImJ_G0017378.1 mouse_genomes_project 10 76433290 76466002 - MGP_129S1SvImJ_P0025817 Prmt2 protein_coding protein_coding MGP_129S1SvImJ_T0025818.1 MGP_129S1SvImJ_G0017378.1 mouse_genomes_project 10 76434034 76466023 - MGP_129S1SvImJ_P0025818 Prmt2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025819.1 MGP_129S1SvImJ_G0017378.1 mouse_genomes_project 10 76434476 76437255 - Prmt2 protein_coding retained_intron MGP_129S1SvImJ_T0025820.1 MGP_129S1SvImJ_G0017378.1 mouse_genomes_project 10 76434502 76439994 - Prmt2 protein_coding processed_transcript MGP_129S1SvImJ_T0024800.1 MGP_129S1SvImJ_G0017081.1 mouse_genomes_project 10 21921141 21922179 - MGP_129S1SvImJ_P0024800 Taar6 protein_coding protein_coding MGP_129S1SvImJ_T0027542.1 MGP_129S1SvImJ_G0017882.1 mouse_genomes_project 10 132584298 132594170 + MGP_129S1SvImJ_P0027542 Mmp19 protein_coding protein_coding MGP_129S1SvImJ_T0100452.1 MGP_129S1SvImJ_G0038519.1 mouse_genomes_project 10 105164071 105164204 + Gm25376 snoRNA snoRNA MGP_129S1SvImJ_T0026775.1 MGP_129S1SvImJ_G0017633.1 mouse_genomes_project 10 90020667 90065805 + MGP_129S1SvImJ_P0026775 Slc5a8 protein_coding protein_coding MGP_129S1SvImJ_T0100440.1 MGP_129S1SvImJ_G0038507.1 mouse_genomes_project 10 68988027 68988144 + Gm24172 snoRNA snoRNA MGP_129S1SvImJ_T0027309.1 MGP_129S1SvImJ_G0017803.1 mouse_genomes_project 10 130631096 130636176 - MGP_129S1SvImJ_P0027309 March9 protein_coding protein_coding MGP_129S1SvImJ_T0012466.1 MGP_129S1SvImJ_G0010555.1 mouse_genomes_project 10 134087459 134097542 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0025996.1 MGP_129S1SvImJ_G0017425.1 mouse_genomes_project 10 79040923 79050661 + MGP_129S1SvImJ_P0025996 Ilvbl protein_coding unknown_likely_coding MGP_129S1SvImJ_T0025312.1 MGP_129S1SvImJ_G0017264.1 mouse_genomes_project 10 59206141 59309296 + MGP_129S1SvImJ_P0025312 Ascc1 protein_coding protein_coding MGP_129S1SvImJ_T0025313.1 MGP_129S1SvImJ_G0017264.1 mouse_genomes_project 10 59206663 59309296 + MGP_129S1SvImJ_P0025313 Ascc1 protein_coding protein_coding MGP_129S1SvImJ_T0026048.1 MGP_129S1SvImJ_G0017450.1 mouse_genomes_project 10 80201099 80205062 + MGP_129S1SvImJ_P0026048 Madcam1 protein_coding protein_coding MGP_129S1SvImJ_T0000843.1 MGP_129S1SvImJ_G0000777.1 mouse_genomes_project 10 73259202 73259595 - TEC TEC MGP_129S1SvImJ_T0025223.1 MGP_129S1SvImJ_G0017239.1 mouse_genomes_project 10 56884944 56901699 - MGP_129S1SvImJ_P0025223 Serinc1 protein_coding protein_coding MGP_129S1SvImJ_T0025224.1 MGP_129S1SvImJ_G0017239.1 mouse_genomes_project 10 56892205 56901597 - MGP_129S1SvImJ_P0025224 Serinc1 protein_coding protein_coding MGP_129S1SvImJ_T0025225.1 MGP_129S1SvImJ_G0017239.1 mouse_genomes_project 10 56892354 56901579 - MGP_129S1SvImJ_P0025225 Serinc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025226.1 MGP_129S1SvImJ_G0017239.1 mouse_genomes_project 10 56894393 56901646 - Serinc1 protein_coding retained_intron MGP_129S1SvImJ_T0025227.1 MGP_129S1SvImJ_G0017239.1 mouse_genomes_project 10 56894399 56901578 - Serinc1 protein_coding retained_intron MGP_129S1SvImJ_T0099200.1 MGP_129S1SvImJ_G0037267.1 mouse_genomes_project 10 92275487 92275590 + Gm25390 snRNA snRNA MGP_129S1SvImJ_T0100411.1 MGP_129S1SvImJ_G0038478.1 mouse_genomes_project 10 9332770 9332896 + Gm25011 snoRNA snoRNA MGP_129S1SvImJ_T0006105.1 MGP_129S1SvImJ_G0005111.1 mouse_genomes_project 10 32637505 32640501 - Gm26564 lincRNA lincRNA MGP_129S1SvImJ_T0026895.1 MGP_129S1SvImJ_G0017657.1 mouse_genomes_project 10 95258151 95278355 + MGP_129S1SvImJ_P0026895 Usp44 protein_coding protein_coding MGP_129S1SvImJ_T0100407.1 MGP_129S1SvImJ_G0038474.1 mouse_genomes_project 10 7191671 7191802 - Gm25635 snoRNA snoRNA MGP_129S1SvImJ_T0027595.1 MGP_129S1SvImJ_G0017915.1 mouse_genomes_project 10 133401922 133402861 + MGP_129S1SvImJ_P0027595 Olfr791 protein_coding protein_coding MGP_129S1SvImJ_T0027589.1 MGP_129S1SvImJ_G0017910.1 mouse_genomes_project 10 133312670 133322999 + MGP_129S1SvImJ_P0027589 Olfr786 protein_coding protein_coding MGP_129S1SvImJ_T0027590.1 MGP_129S1SvImJ_G0017910.1 mouse_genomes_project 10 133322060 133322999 + MGP_129S1SvImJ_P0027590 Olfr786 protein_coding protein_coding MGP_129S1SvImJ_T0027401.1 MGP_129S1SvImJ_G0017829.1 mouse_genomes_project 10 131286610 131292403 - MGP_129S1SvImJ_P0027401 Nab2 protein_coding protein_coding MGP_129S1SvImJ_T0027402.1 MGP_129S1SvImJ_G0017829.1 mouse_genomes_project 10 131286611 131292325 - MGP_129S1SvImJ_P0027402 Nab2 protein_coding protein_coding MGP_129S1SvImJ_T0027403.1 MGP_129S1SvImJ_G0017829.1 mouse_genomes_project 10 131290617 131291174 - MGP_129S1SvImJ_P0027403 Nab2 protein_coding protein_coding MGP_129S1SvImJ_T0027404.1 MGP_129S1SvImJ_G0017829.1 mouse_genomes_project 10 131290676 131294271 - MGP_129S1SvImJ_P0027404 Nab2 protein_coding protein_coding MGP_129S1SvImJ_T0026195.1 MGP_129S1SvImJ_G0017485.1 mouse_genomes_project 10 80733412 80743845 + MGP_129S1SvImJ_P0026195 Midn protein_coding protein_coding MGP_129S1SvImJ_T0026196.1 MGP_129S1SvImJ_G0017485.1 mouse_genomes_project 10 80733412 80743844 + MGP_129S1SvImJ_P0026196 Midn protein_coding protein_coding MGP_129S1SvImJ_T0026197.1 MGP_129S1SvImJ_G0017485.1 mouse_genomes_project 10 80734313 80735480 + MGP_129S1SvImJ_P0026197 Midn protein_coding protein_coding MGP_129S1SvImJ_T0026198.1 MGP_129S1SvImJ_G0017485.1 mouse_genomes_project 10 80735087 80738896 + Midn protein_coding processed_transcript MGP_129S1SvImJ_T0026199.1 MGP_129S1SvImJ_G0017485.1 mouse_genomes_project 10 80735665 80739077 + MGP_129S1SvImJ_P0026199 Midn protein_coding protein_coding MGP_129S1SvImJ_T0026200.1 MGP_129S1SvImJ_G0017485.1 mouse_genomes_project 10 80736362 80739681 + MGP_129S1SvImJ_P0026200 Midn protein_coding protein_coding MGP_129S1SvImJ_T0026201.1 MGP_129S1SvImJ_G0017485.1 mouse_genomes_project 10 80736446 80738905 + MGP_129S1SvImJ_P0026201 Midn protein_coding protein_coding MGP_129S1SvImJ_T0003036.1 MGP_129S1SvImJ_G0002844.1 mouse_genomes_project 10 23569851 23703335 + Gm29571 antisense antisense MGP_129S1SvImJ_T0006160.1 MGP_129S1SvImJ_G0005146.1 mouse_genomes_project 10 93506785 93721873 - Gm20757 lincRNA lincRNA MGP_129S1SvImJ_T0006102.1 MGP_129S1SvImJ_G0005108.1 mouse_genomes_project 10 19644763 19660959 - Platr6 lincRNA lincRNA MGP_129S1SvImJ_T0027566.1 MGP_129S1SvImJ_G0017892.1 mouse_genomes_project 10 132760281 132762993 - MGP_129S1SvImJ_P0027566 Mettl7b protein_coding protein_coding MGP_129S1SvImJ_T0026247.1 MGP_129S1SvImJ_G0017496.1 mouse_genomes_project 10 80921059 80930218 - Pcsk4 protein_coding retained_intron MGP_129S1SvImJ_T0026248.1 MGP_129S1SvImJ_G0017496.1 mouse_genomes_project 10 80921059 80930220 - MGP_129S1SvImJ_P0026248 Pcsk4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026249.1 MGP_129S1SvImJ_G0017496.1 mouse_genomes_project 10 80921059 80930263 - MGP_129S1SvImJ_P0026249 Pcsk4 protein_coding protein_coding MGP_129S1SvImJ_T0026250.1 MGP_129S1SvImJ_G0017496.1 mouse_genomes_project 10 80921063 80922904 - Pcsk4 protein_coding retained_intron MGP_129S1SvImJ_T0026251.1 MGP_129S1SvImJ_G0017496.1 mouse_genomes_project 10 80921063 80922903 - Pcsk4 protein_coding retained_intron MGP_129S1SvImJ_T0026252.1 MGP_129S1SvImJ_G0017496.1 mouse_genomes_project 10 80921898 80930164 - MGP_129S1SvImJ_P0026252 Pcsk4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024997.1 MGP_129S1SvImJ_G0017156.1 mouse_genomes_project 10 38486670 38501516 - MGP_129S1SvImJ_P0024997 Mfsd4b3 protein_coding protein_coding MGP_129S1SvImJ_T0026762.1 MGP_129S1SvImJ_G0017629.1 mouse_genomes_project 10 89613249 89705222 - MGP_129S1SvImJ_P0026762 Mybpc1 protein_coding protein_coding MGP_129S1SvImJ_T0026763.1 MGP_129S1SvImJ_G0017629.1 mouse_genomes_project 10 89613252 89618183 - Mybpc1 protein_coding retained_intron MGP_129S1SvImJ_T0026764.1 MGP_129S1SvImJ_G0017629.1 mouse_genomes_project 10 89613309 89705095 - MGP_129S1SvImJ_P0026764 Mybpc1 protein_coding protein_coding MGP_129S1SvImJ_T0026765.1 MGP_129S1SvImJ_G0017629.1 mouse_genomes_project 10 89614357 89632441 - MGP_129S1SvImJ_P0026765 Mybpc1 protein_coding protein_coding MGP_129S1SvImJ_T0026766.1 MGP_129S1SvImJ_G0017629.1 mouse_genomes_project 10 89621186 89632493 - Mybpc1 protein_coding retained_intron MGP_129S1SvImJ_T0026767.1 MGP_129S1SvImJ_G0017629.1 mouse_genomes_project 10 89621277 89649269 - MGP_129S1SvImJ_P0026767 Mybpc1 protein_coding protein_coding MGP_129S1SvImJ_T0025420.1 MGP_129S1SvImJ_G0017295.1 mouse_genomes_project 10 61683307 61767155 - MGP_129S1SvImJ_P0025420 Hk1 protein_coding protein_coding MGP_129S1SvImJ_T0025421.1 MGP_129S1SvImJ_G0017295.1 mouse_genomes_project 10 61683556 61807017 - MGP_129S1SvImJ_P0025421 Hk1 protein_coding protein_coding MGP_129S1SvImJ_T0025422.1 MGP_129S1SvImJ_G0017295.1 mouse_genomes_project 10 61683560 61784994 - MGP_129S1SvImJ_P0025422 Hk1 protein_coding protein_coding MGP_129S1SvImJ_T0025423.1 MGP_129S1SvImJ_G0017295.1 mouse_genomes_project 10 61684361 61769335 - MGP_129S1SvImJ_P0025423 Hk1 protein_coding protein_coding MGP_129S1SvImJ_T0025424.1 MGP_129S1SvImJ_G0017295.1 mouse_genomes_project 10 61698969 61707639 - Hk1 protein_coding retained_intron MGP_129S1SvImJ_T0025425.1 MGP_129S1SvImJ_G0017295.1 mouse_genomes_project 10 61713169 61740661 - MGP_129S1SvImJ_P0025425 Hk1 protein_coding protein_coding MGP_129S1SvImJ_T0025426.1 MGP_129S1SvImJ_G0017295.1 mouse_genomes_project 10 61713402 61749821 - MGP_129S1SvImJ_P0025426 Hk1 protein_coding protein_coding MGP_129S1SvImJ_T0025427.1 MGP_129S1SvImJ_G0017295.1 mouse_genomes_project 10 61716296 61769312 - MGP_129S1SvImJ_P0025427 Hk1 protein_coding protein_coding MGP_129S1SvImJ_T0025428.1 MGP_129S1SvImJ_G0017295.1 mouse_genomes_project 10 61716541 61769321 - Hk1 protein_coding retained_intron MGP_129S1SvImJ_T0025429.1 MGP_129S1SvImJ_G0017295.1 mouse_genomes_project 10 61737743 61806961 - MGP_129S1SvImJ_P0025429 Hk1 protein_coding protein_coding MGP_129S1SvImJ_T0025430.1 MGP_129S1SvImJ_G0017295.1 mouse_genomes_project 10 61737743 61802211 - MGP_129S1SvImJ_P0025430 Hk1 protein_coding protein_coding MGP_129S1SvImJ_T0025431.1 MGP_129S1SvImJ_G0017295.1 mouse_genomes_project 10 61737743 61806961 - MGP_129S1SvImJ_P0025431 Hk1 protein_coding protein_coding MGP_129S1SvImJ_T0025432.1 MGP_129S1SvImJ_G0017295.1 mouse_genomes_project 10 61737743 61802211 - MGP_129S1SvImJ_P0025432 Hk1 protein_coding protein_coding MGP_129S1SvImJ_T0025433.1 MGP_129S1SvImJ_G0017295.1 mouse_genomes_project 10 61737743 61802211 - MGP_129S1SvImJ_P0025433 Hk1 protein_coding protein_coding MGP_129S1SvImJ_T0025434.1 MGP_129S1SvImJ_G0017295.1 mouse_genomes_project 10 61737743 61802211 - MGP_129S1SvImJ_P0025434 Hk1 protein_coding protein_coding MGP_129S1SvImJ_T0025435.1 MGP_129S1SvImJ_G0017295.1 mouse_genomes_project 10 61737743 61802211 - MGP_129S1SvImJ_P0025435 Hk1 protein_coding protein_coding MGP_129S1SvImJ_T0025436.1 MGP_129S1SvImJ_G0017295.1 mouse_genomes_project 10 61737743 61802211 - MGP_129S1SvImJ_P0025436 Hk1 protein_coding protein_coding MGP_129S1SvImJ_T0025437.1 MGP_129S1SvImJ_G0017295.1 mouse_genomes_project 10 61737743 61806961 - MGP_129S1SvImJ_P0025437 Hk1 protein_coding protein_coding MGP_129S1SvImJ_T0025438.1 MGP_129S1SvImJ_G0017295.1 mouse_genomes_project 10 61737743 61802211 - MGP_129S1SvImJ_P0025438 Hk1 protein_coding protein_coding MGP_129S1SvImJ_T0025439.1 MGP_129S1SvImJ_G0017295.1 mouse_genomes_project 10 61737788 61788906 - MGP_129S1SvImJ_P0025439 Hk1 protein_coding protein_coding MGP_129S1SvImJ_T0024678.1 MGP_129S1SvImJ_G0017036.1 mouse_genomes_project 10 15801126 15880423 - MGP_129S1SvImJ_P0024678 Ect2l protein_coding protein_coding MGP_129S1SvImJ_T0024679.1 MGP_129S1SvImJ_G0017036.1 mouse_genomes_project 10 15801126 15841882 - MGP_129S1SvImJ_P0024679 Ect2l protein_coding unknown_likely_coding MGP_129S1SvImJ_T0025205.1 MGP_129S1SvImJ_G0017232.1 mouse_genomes_project 10 52828713 52949339 - MGP_129S1SvImJ_P0025205 Fam184a protein_coding protein_coding MGP_129S1SvImJ_T0025206.1 MGP_129S1SvImJ_G0017232.1 mouse_genomes_project 10 52828934 52889502 - MGP_129S1SvImJ_P0025206 Fam184a protein_coding protein_coding MGP_129S1SvImJ_T0025207.1 MGP_129S1SvImJ_G0017232.1 mouse_genomes_project 10 52828937 52850981 - MGP_129S1SvImJ_P0025207 Fam184a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025208.1 MGP_129S1SvImJ_G0017232.1 mouse_genomes_project 10 52828938 52894022 - MGP_129S1SvImJ_P0025208 Fam184a protein_coding protein_coding MGP_129S1SvImJ_T0025209.1 MGP_129S1SvImJ_G0017232.1 mouse_genomes_project 10 52829198 52843040 - MGP_129S1SvImJ_P0025209 Fam184a protein_coding protein_coding MGP_129S1SvImJ_T0025210.1 MGP_129S1SvImJ_G0017232.1 mouse_genomes_project 10 52829202 52833838 - MGP_129S1SvImJ_P0025210 Fam184a protein_coding protein_coding MGP_129S1SvImJ_T0025211.1 MGP_129S1SvImJ_G0017232.1 mouse_genomes_project 10 52833748 52873848 - Fam184a protein_coding processed_transcript MGP_129S1SvImJ_T0025212.1 MGP_129S1SvImJ_G0017232.1 mouse_genomes_project 10 52891675 52949368 - Fam184a protein_coding retained_intron MGP_129S1SvImJ_T0026376.1 MGP_129S1SvImJ_G0017534.1 mouse_genomes_project 10 81747663 81760188 + MGP_129S1SvImJ_P0026376 Thop1 protein_coding protein_coding MGP_129S1SvImJ_T0026377.1 MGP_129S1SvImJ_G0017534.1 mouse_genomes_project 10 81747755 81752506 + Thop1 protein_coding retained_intron MGP_129S1SvImJ_T0026378.1 MGP_129S1SvImJ_G0017534.1 mouse_genomes_project 10 81747787 81756233 + Thop1 protein_coding processed_transcript MGP_129S1SvImJ_T0026379.1 MGP_129S1SvImJ_G0017534.1 mouse_genomes_project 10 81750907 81756384 + Thop1 protein_coding retained_intron MGP_129S1SvImJ_T0026380.1 MGP_129S1SvImJ_G0017534.1 mouse_genomes_project 10 81756496 81757708 + Thop1 protein_coding retained_intron MGP_129S1SvImJ_T0026164.1 MGP_129S1SvImJ_G0017481.1 mouse_genomes_project 10 80638033 80687897 - MGP_129S1SvImJ_P0026164 Sbno2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0026165.1 MGP_129S1SvImJ_G0017481.1 mouse_genomes_project 10 80638459 80687959 - MGP_129S1SvImJ_P0026165 Sbno2 protein_coding protein_coding MGP_129S1SvImJ_T0024777.1 MGP_129S1SvImJ_G0017068.1 mouse_genomes_project 10 20572439 20634385 + MGP_129S1SvImJ_P0024777 Slc2a12 protein_coding protein_coding MGP_129S1SvImJ_T0024778.1 MGP_129S1SvImJ_G0017068.1 mouse_genomes_project 10 20576438 20596724 + Slc2a12 protein_coding processed_transcript MGP_129S1SvImJ_T0025465.1 MGP_129S1SvImJ_G0017302.1 mouse_genomes_project 10 62021204 62044512 - MGP_129S1SvImJ_P0025465 Ddx21 protein_coding protein_coding MGP_129S1SvImJ_T0025778.1 MGP_129S1SvImJ_G0017361.1 mouse_genomes_project 10 75826246 75948456 - MGP_129S1SvImJ_P0025778 Cabin1 protein_coding protein_coding MGP_129S1SvImJ_T0027592.1 MGP_129S1SvImJ_G0017912.1 mouse_genomes_project 10 133361454 133362393 + MGP_129S1SvImJ_P0027592 Olfr789 protein_coding protein_coding MGP_129S1SvImJ_T0006176.1 MGP_129S1SvImJ_G0005159.1 mouse_genomes_project 10 119779030 119781720 + D630029K05Rik lincRNA lincRNA MGP_129S1SvImJ_T0006177.1 MGP_129S1SvImJ_G0005159.1 mouse_genomes_project 10 119779063 119781906 + D630029K05Rik lincRNA lincRNA MGP_129S1SvImJ_T0006178.1 MGP_129S1SvImJ_G0005159.1 mouse_genomes_project 10 119780078 119782036 + D630029K05Rik lincRNA lincRNA MGP_129S1SvImJ_T0006179.1 MGP_129S1SvImJ_G0005159.1 mouse_genomes_project 10 119780597 119783429 + D630029K05Rik lincRNA lincRNA MGP_129S1SvImJ_T0003092.1 MGP_129S1SvImJ_G0002887.1 mouse_genomes_project 10 87074579 87078607 + Gm15990 antisense antisense MGP_129S1SvImJ_T0003034.1 MGP_129S1SvImJ_G0002842.1 mouse_genomes_project 10 18939110 18949843 + Gm26577 antisense antisense MGP_129S1SvImJ_T0024981.1 MGP_129S1SvImJ_G0017152.1 mouse_genomes_project 10 38130577 38175361 + MGP_129S1SvImJ_P0024981 Traf3ip2 protein_coding protein_coding MGP_129S1SvImJ_T0024982.1 MGP_129S1SvImJ_G0017152.1 mouse_genomes_project 10 38144099 38174583 + MGP_129S1SvImJ_P0024982 Traf3ip2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0024983.1 MGP_129S1SvImJ_G0017152.1 mouse_genomes_project 10 38159789 38165315 + Traf3ip2 protein_coding retained_intron MGP_129S1SvImJ_T0024984.1 MGP_129S1SvImJ_G0017152.1 mouse_genomes_project 10 38165679 38170477 + Traf3ip2 protein_coding processed_transcript MGP_129S1SvImJ_T0024985.1 MGP_129S1SvImJ_G0017152.1 mouse_genomes_project 10 38166270 38174877 + Traf3ip2 protein_coding retained_intron MGP_129S1SvImJ_T0024986.1 MGP_129S1SvImJ_G0017152.1 mouse_genomes_project 10 38170111 38174879 + Traf3ip2 protein_coding retained_intron MGP_129S1SvImJ_T0026700.1 MGP_129S1SvImJ_G0017614.1 mouse_genomes_project 10 87712348 87712799 - MGP_129S1SvImJ_P0026700 Fabp3-ps1 protein_coding protein_coding MGP_129S1SvImJ_T0027384.1 MGP_129S1SvImJ_G0017825.1 mouse_genomes_project 10 131137306 131142638 - MGP_129S1SvImJ_P0027384 Shmt2 protein_coding protein_coding MGP_129S1SvImJ_T0026446.1 MGP_129S1SvImJ_G0017553.1 mouse_genomes_project 10 82058409 82062842 - MGP_129S1SvImJ_P0026446 Hmg20b protein_coding protein_coding MGP_129S1SvImJ_T0026447.1 MGP_129S1SvImJ_G0017553.1 mouse_genomes_project 10 82058412 82062731 - Hmg20b protein_coding retained_intron MGP_129S1SvImJ_T0026448.1 MGP_129S1SvImJ_G0017553.1 mouse_genomes_project 10 82058412 82062788 - MGP_129S1SvImJ_P0026448 Hmg20b protein_coding protein_coding MGP_129S1SvImJ_T0026449.1 MGP_129S1SvImJ_G0017553.1 mouse_genomes_project 10 82058412 82062786 - MGP_129S1SvImJ_P0026449 Hmg20b protein_coding protein_coding MGP_129S1SvImJ_T0026450.1 MGP_129S1SvImJ_G0017553.1 mouse_genomes_project 10 82058412 82062553 - MGP_129S1SvImJ_P0026450 Hmg20b protein_coding protein_coding MGP_129S1SvImJ_T0026451.1 MGP_129S1SvImJ_G0017553.1 mouse_genomes_project 10 82058413 82059092 - Hmg20b protein_coding retained_intron MGP_129S1SvImJ_T0026452.1 MGP_129S1SvImJ_G0017553.1 mouse_genomes_project 10 82058413 82062689 - MGP_129S1SvImJ_P0026452 Hmg20b protein_coding protein_coding MGP_129S1SvImJ_T0026453.1 MGP_129S1SvImJ_G0017553.1 mouse_genomes_project 10 82059120 82061447 - MGP_129S1SvImJ_P0026453 Hmg20b protein_coding protein_coding MGP_129S1SvImJ_T0026454.1 MGP_129S1SvImJ_G0017553.1 mouse_genomes_project 10 82059358 82062805 - MGP_129S1SvImJ_P0026454 Hmg20b protein_coding protein_coding MGP_129S1SvImJ_T0026455.1 MGP_129S1SvImJ_G0017553.1 mouse_genomes_project 10 82059359 82060284 - Hmg20b protein_coding retained_intron MGP_129S1SvImJ_T0026456.1 MGP_129S1SvImJ_G0017553.1 mouse_genomes_project 10 82061365 82062681 - Hmg20b protein_coding processed_transcript MGP_129S1SvImJ_T0026457.1 MGP_129S1SvImJ_G0017553.1 mouse_genomes_project 10 82061407 82062679 - Hmg20b protein_coding retained_intron MGP_129S1SvImJ_T0026458.1 MGP_129S1SvImJ_G0017553.1 mouse_genomes_project 10 82061417 82062806 - Hmg20b protein_coding processed_transcript MGP_129S1SvImJ_T0027540.1 MGP_129S1SvImJ_G0017881.1 mouse_genomes_project 10 132537353 132556151 + MGP_129S1SvImJ_P0027540 Pym1 protein_coding protein_coding MGP_129S1SvImJ_T0027541.1 MGP_129S1SvImJ_G0017881.1 mouse_genomes_project 10 132537929 132556151 + MGP_129S1SvImJ_P0027541 Pym1 protein_coding protein_coding MGP_129S1SvImJ_T0025134.1 MGP_129S1SvImJ_G0017198.1 mouse_genomes_project 10 42690013 42736066 + MGP_129S1SvImJ_P0025134 Rtn4ip1 protein_coding protein_coding MGP_129S1SvImJ_T0025135.1 MGP_129S1SvImJ_G0017198.1 mouse_genomes_project 10 42690595 42736075 + MGP_129S1SvImJ_P0025135 Rtn4ip1 protein_coding protein_coding MGP_129S1SvImJ_T0027468.1 MGP_129S1SvImJ_G0017853.1 mouse_genomes_project 10 131941644 131964178 + Timeless protein_coding retained_intron MGP_129S1SvImJ_T0027469.1 MGP_129S1SvImJ_G0017853.1 mouse_genomes_project 10 131941653 131964098 + MGP_129S1SvImJ_P0027469 Timeless protein_coding protein_coding MGP_129S1SvImJ_T0027470.1 MGP_129S1SvImJ_G0017853.1 mouse_genomes_project 10 131941655 131957355 + MGP_129S1SvImJ_P0027470 Timeless protein_coding protein_coding MGP_129S1SvImJ_T0027471.1 MGP_129S1SvImJ_G0017853.1 mouse_genomes_project 10 131943435 131952921 + MGP_129S1SvImJ_P0027471 Timeless protein_coding protein_coding MGP_129S1SvImJ_T0027472.1 MGP_129S1SvImJ_G0017853.1 mouse_genomes_project 10 131943454 131964187 + MGP_129S1SvImJ_P0027472 Timeless protein_coding protein_coding MGP_129S1SvImJ_T0027473.1 MGP_129S1SvImJ_G0017853.1 mouse_genomes_project 10 131951146 131963954 + MGP_129S1SvImJ_P0027473 Timeless protein_coding unknown_likely_coding MGP_129S1SvImJ_T0027474.1 MGP_129S1SvImJ_G0017853.1 mouse_genomes_project 10 131951646 131952861 + Timeless protein_coding retained_intron MGP_129S1SvImJ_T0027475.1 MGP_129S1SvImJ_G0017853.1 mouse_genomes_project 10 131953584 131954256 + Timeless protein_coding retained_intron MGP_129S1SvImJ_T0027476.1 MGP_129S1SvImJ_G0017853.1 mouse_genomes_project 10 131953653 131955174 + Timeless protein_coding processed_transcript MGP_129S1SvImJ_T0027477.1 MGP_129S1SvImJ_G0017853.1 mouse_genomes_project 10 131953874 131954941 + Timeless protein_coding retained_intron MGP_129S1SvImJ_T0027478.1 MGP_129S1SvImJ_G0017853.1 mouse_genomes_project 10 131958525 131959293 + Timeless protein_coding retained_intron MGP_129S1SvImJ_T0027479.1 MGP_129S1SvImJ_G0017853.1 mouse_genomes_project 10 131958580 131964185 + Timeless protein_coding processed_transcript MGP_129S1SvImJ_T0027480.1 MGP_129S1SvImJ_G0017853.1 mouse_genomes_project 10 131960458 131961106 + Timeless protein_coding retained_intron MGP_129S1SvImJ_T0027481.1 MGP_129S1SvImJ_G0017853.1 mouse_genomes_project 10 131960864 131961618 + Timeless protein_coding retained_intron MGP_129S1SvImJ_T0026603.1 MGP_129S1SvImJ_G0017581.1 mouse_genomes_project 10 83627916 83660620 + MGP_129S1SvImJ_P0026603 protein_coding protein_coding MGP_129S1SvImJ_T0009634.1 MGP_129S1SvImJ_G0007750.1 mouse_genomes_project 10 103689499 103689580 + Mir3059 miRNA miRNA MGP_129S1SvImJ_T0098433.1 MGP_129S1SvImJ_G0036518.1 mouse_genomes_project 10 882779 882888 - Gm23023 rRNA rRNA MGP_129S1SvImJ_T0025140.1 MGP_129S1SvImJ_G0017202.1 mouse_genomes_project 10 43042476 43069873 + MGP_129S1SvImJ_P0025140 protein_coding protein_coding MGP_129S1SvImJ_T0098436.1 MGP_129S1SvImJ_G0036521.1 mouse_genomes_project 10 29552141 29552254 - n-R5s76 rRNA rRNA MGP_129S1SvImJ_T0026357.1 MGP_129S1SvImJ_G0017528.1 mouse_genomes_project 10 81572060 81591077 - MGP_129S1SvImJ_P0026357 Lmnb2 protein_coding protein_coding MGP_129S1SvImJ_T0026358.1 MGP_129S1SvImJ_G0017528.1 mouse_genomes_project 10 81573500 81577115 - MGP_129S1SvImJ_P0026358 Lmnb2 protein_coding protein_coding MGP_129S1SvImJ_T0026359.1 MGP_129S1SvImJ_G0017528.1 mouse_genomes_project 10 81582181 81590710 - Lmnb2 protein_coding processed_transcript MGP_129S1SvImJ_T0024996.1 MGP_129S1SvImJ_G0017155.1 mouse_genomes_project 10 38454651 38461546 - MGP_129S1SvImJ_P0024996 Mfsd4b2 protein_coding protein_coding MGP_129S1SvImJ_T0026634.1 MGP_129S1SvImJ_G0017590.1 mouse_genomes_project 10 85229573 85303676 - MGP_129S1SvImJ_P0026634 Nuak1 protein_coding protein_coding MGP_129S1SvImJ_T0026635.1 MGP_129S1SvImJ_G0017590.1 mouse_genomes_project 10 85233964 85251350 - MGP_129S1SvImJ_P0026635 Nuak1 protein_coding protein_coding MGP_129S1SvImJ_T0026743.1 MGP_129S1SvImJ_G0017626.1 mouse_genomes_project 10 89463286 89498989 + MGP_129S1SvImJ_P0026743 Gnptab protein_coding protein_coding MGP_129S1SvImJ_T0026744.1 MGP_129S1SvImJ_G0017626.1 mouse_genomes_project 10 89463378 89498946 + MGP_129S1SvImJ_P0026744 Gnptab protein_coding protein_coding MGP_129S1SvImJ_T0026745.1 MGP_129S1SvImJ_G0017626.1 mouse_genomes_project 10 89463378 89531582 + MGP_129S1SvImJ_P0026745 Gnptab protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026746.1 MGP_129S1SvImJ_G0017626.1 mouse_genomes_project 10 89463380 89531591 + MGP_129S1SvImJ_P0026746 Gnptab protein_coding protein_coding MGP_129S1SvImJ_T0026747.1 MGP_129S1SvImJ_G0017626.1 mouse_genomes_project 10 89513916 89517612 + Gnptab protein_coding processed_transcript MGP_129S1SvImJ_T0026748.1 MGP_129S1SvImJ_G0017626.1 mouse_genomes_project 10 89517684 89525118 + Gnptab protein_coding processed_transcript MGP_129S1SvImJ_T0026749.1 MGP_129S1SvImJ_G0017626.1 mouse_genomes_project 10 89520299 89520985 + Gnptab protein_coding retained_intron MGP_129S1SvImJ_T0024665.1 MGP_129S1SvImJ_G0017032.1 mouse_genomes_project 10 15442961 15454602 + Txlnb protein_coding retained_intron MGP_129S1SvImJ_T0024666.1 MGP_129S1SvImJ_G0017032.1 mouse_genomes_project 10 15442991 15491161 + MGP_129S1SvImJ_P0024666 Txlnb protein_coding protein_coding MGP_129S1SvImJ_T0101599.1 MGP_129S1SvImJ_G0039651.1 mouse_genomes_project 10 7971247 7981615 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101600.1 MGP_129S1SvImJ_G0039651.1 mouse_genomes_project 10 7978352 7979349 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0025487.1 MGP_129S1SvImJ_G0017309.1 mouse_genomes_project 10 62467852 62478192 + Rufy2 protein_coding retained_intron MGP_129S1SvImJ_T0025488.1 MGP_129S1SvImJ_G0017309.1 mouse_genomes_project 10 62467868 62494889 + MGP_129S1SvImJ_P0025488 Rufy2 protein_coding protein_coding MGP_129S1SvImJ_T0025489.1 MGP_129S1SvImJ_G0017309.1 mouse_genomes_project 10 62467871 62506385 + MGP_129S1SvImJ_P0025489 Rufy2 protein_coding protein_coding MGP_129S1SvImJ_T0025490.1 MGP_129S1SvImJ_G0017309.1 mouse_genomes_project 10 62467881 62509640 + MGP_129S1SvImJ_P0025490 Rufy2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025491.1 MGP_129S1SvImJ_G0017309.1 mouse_genomes_project 10 62467891 62494862 + MGP_129S1SvImJ_P0025491 Rufy2 protein_coding protein_coding MGP_129S1SvImJ_T0025492.1 MGP_129S1SvImJ_G0017309.1 mouse_genomes_project 10 62467922 62492642 + MGP_129S1SvImJ_P0025492 Rufy2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025493.1 MGP_129S1SvImJ_G0017309.1 mouse_genomes_project 10 62469057 62477071 + MGP_129S1SvImJ_P0025493 Rufy2 protein_coding protein_coding MGP_129S1SvImJ_T0025494.1 MGP_129S1SvImJ_G0017309.1 mouse_genomes_project 10 62492679 62498419 + Rufy2 protein_coding retained_intron MGP_129S1SvImJ_T0024794.1 MGP_129S1SvImJ_G0017075.1 mouse_genomes_project 10 21823913 21835602 + MGP_129S1SvImJ_P0024794 Vnn1 protein_coding protein_coding MGP_129S1SvImJ_T0025468.1 MGP_129S1SvImJ_G0017304.1 mouse_genomes_project 10 62106937 62183435 - MGP_129S1SvImJ_P0025468 Stox1 protein_coding protein_coding MGP_129S1SvImJ_T0025469.1 MGP_129S1SvImJ_G0017304.1 mouse_genomes_project 10 62106937 62183108 - MGP_129S1SvImJ_P0025469 Stox1 protein_coding protein_coding MGP_129S1SvImJ_T0003068.1 MGP_129S1SvImJ_G0002869.1 mouse_genomes_project 10 76521392 76523088 + Gm16240 antisense antisense MGP_129S1SvImJ_T0099169.1 MGP_129S1SvImJ_G0037236.1 mouse_genomes_project 10 38272345 38272461 + Gm22105 snRNA snRNA MGP_129S1SvImJ_T0026027.1 MGP_129S1SvImJ_G0017445.1 mouse_genomes_project 10 80070221 80085024 - MGP_129S1SvImJ_P0026027 Mier2 protein_coding protein_coding MGP_129S1SvImJ_T0026028.1 MGP_129S1SvImJ_G0017445.1 mouse_genomes_project 10 80070221 80085132 - MGP_129S1SvImJ_P0026028 Mier2 protein_coding protein_coding MGP_129S1SvImJ_T0026029.1 MGP_129S1SvImJ_G0017445.1 mouse_genomes_project 10 80070222 80071937 - MGP_129S1SvImJ_P0026029 Mier2 protein_coding protein_coding MGP_129S1SvImJ_T0026030.1 MGP_129S1SvImJ_G0017445.1 mouse_genomes_project 10 80070897 80072142 - Mier2 protein_coding retained_intron MGP_129S1SvImJ_T0026031.1 MGP_129S1SvImJ_G0017445.1 mouse_genomes_project 10 80071644 80074747 - Mier2 protein_coding retained_intron MGP_129S1SvImJ_T0026032.1 MGP_129S1SvImJ_G0017445.1 mouse_genomes_project 10 80072443 80074329 - Mier2 protein_coding processed_transcript MGP_129S1SvImJ_T0026033.1 MGP_129S1SvImJ_G0017445.1 mouse_genomes_project 10 80078778 80085047 - MGP_129S1SvImJ_P0026033 Mier2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026034.1 MGP_129S1SvImJ_G0017445.1 mouse_genomes_project 10 80078850 80084817 - MGP_129S1SvImJ_P0026034 Mier2 protein_coding protein_coding MGP_129S1SvImJ_T0026035.1 MGP_129S1SvImJ_G0017445.1 mouse_genomes_project 10 80078857 80085054 - MGP_129S1SvImJ_P0026035 Mier2 protein_coding protein_coding MGP_129S1SvImJ_T0026036.1 MGP_129S1SvImJ_G0017445.1 mouse_genomes_project 10 80078882 80080786 - MGP_129S1SvImJ_P0026036 Mier2 protein_coding protein_coding MGP_129S1SvImJ_T0026037.1 MGP_129S1SvImJ_G0017445.1 mouse_genomes_project 10 80079534 80085010 - MGP_129S1SvImJ_P0026037 Mier2 protein_coding protein_coding MGP_129S1SvImJ_T0026038.1 MGP_129S1SvImJ_G0017445.1 mouse_genomes_project 10 80079612 80084538 - MGP_129S1SvImJ_P0026038 Mier2 protein_coding protein_coding MGP_129S1SvImJ_T0025176.1 MGP_129S1SvImJ_G0017217.1 mouse_genomes_project 10 50752287 50770859 - MGP_129S1SvImJ_P0025176 Gprc6a protein_coding protein_coding MGP_129S1SvImJ_T0024447.1 MGP_129S1SvImJ_G0016987.1 mouse_genomes_project 10 2901436 2916096 - MGP_129S1SvImJ_P0024447 Mtrf1l protein_coding protein_coding MGP_129S1SvImJ_T0024448.1 MGP_129S1SvImJ_G0016987.1 mouse_genomes_project 10 2902768 2905317 - Mtrf1l protein_coding processed_transcript MGP_129S1SvImJ_T0024449.1 MGP_129S1SvImJ_G0016987.1 mouse_genomes_project 10 2909918 2915732 - Mtrf1l protein_coding processed_transcript MGP_129S1SvImJ_T0025918.1 MGP_129S1SvImJ_G0017401.1 mouse_genomes_project 10 77963142 77986141 + MGP_129S1SvImJ_P0025918 Ube2g2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025919.1 MGP_129S1SvImJ_G0017401.1 mouse_genomes_project 10 77963193 77987580 + MGP_129S1SvImJ_P0025919 Ube2g2 protein_coding protein_coding MGP_129S1SvImJ_T0025920.1 MGP_129S1SvImJ_G0017401.1 mouse_genomes_project 10 77963197 77983082 + MGP_129S1SvImJ_P0025920 Ube2g2 protein_coding protein_coding MGP_129S1SvImJ_T0025921.1 MGP_129S1SvImJ_G0017401.1 mouse_genomes_project 10 77982767 77986090 + Ube2g2 protein_coding retained_intron MGP_129S1SvImJ_T0027021.1 MGP_129S1SvImJ_G0017700.1 mouse_genomes_project 10 106223741 106225954 + MGP_129S1SvImJ_P0027021 protein_coding protein_coding MGP_129S1SvImJ_T0026151.1 MGP_129S1SvImJ_G0017479.1 mouse_genomes_project 10 80611134 80612371 - Polr2e protein_coding retained_intron MGP_129S1SvImJ_T0026152.1 MGP_129S1SvImJ_G0017479.1 mouse_genomes_project 10 80611134 80614896 - Polr2e protein_coding retained_intron MGP_129S1SvImJ_T0026153.1 MGP_129S1SvImJ_G0017479.1 mouse_genomes_project 10 80611134 80614981 - MGP_129S1SvImJ_P0026153 Polr2e protein_coding protein_coding MGP_129S1SvImJ_T0026154.1 MGP_129S1SvImJ_G0017479.1 mouse_genomes_project 10 80611136 80614836 - Polr2e protein_coding retained_intron MGP_129S1SvImJ_T0026155.1 MGP_129S1SvImJ_G0017479.1 mouse_genomes_project 10 80611360 80614887 - Polr2e protein_coding retained_intron MGP_129S1SvImJ_T0006144.1 MGP_129S1SvImJ_G0005143.1 mouse_genomes_project 10 92443075 92444155 + Gm26765 lincRNA lincRNA MGP_129S1SvImJ_T0009597.1 MGP_129S1SvImJ_G0007713.1 mouse_genomes_project 10 60206086 60206177 + Mir6408 miRNA miRNA MGP_129S1SvImJ_T0024920.1 MGP_129S1SvImJ_G0017127.1 mouse_genomes_project 10 32091467 32105335 - MGP_129S1SvImJ_P0024920 Sult3a2 protein_coding protein_coding MGP_129S1SvImJ_T0003079.1 MGP_129S1SvImJ_G0002878.1 mouse_genomes_project 10 81891818 81895649 + Atcayos antisense antisense MGP_129S1SvImJ_T0003080.1 MGP_129S1SvImJ_G0002878.1 mouse_genomes_project 10 81891892 81908955 + Atcayos antisense antisense MGP_129S1SvImJ_T0003081.1 MGP_129S1SvImJ_G0002878.1 mouse_genomes_project 10 81891900 81911259 + Atcayos antisense antisense MGP_129S1SvImJ_T0006104.1 MGP_129S1SvImJ_G0005110.1 mouse_genomes_project 10 22420150 22425315 + Gm15271 lincRNA lincRNA MGP_129S1SvImJ_T0025272.1 MGP_129S1SvImJ_G0017254.1 mouse_genomes_project 10 58365963 58370445 + MGP_129S1SvImJ_P0025272 Sowahc protein_coding protein_coding MGP_129S1SvImJ_T0025809.1 MGP_129S1SvImJ_G0017374.1 mouse_genomes_project 10 76156635 76217988 + MGP_129S1SvImJ_P0025809 Gm5134 protein_coding protein_coding MGP_129S1SvImJ_T0025810.1 MGP_129S1SvImJ_G0017374.1 mouse_genomes_project 10 76181503 76206751 + Gm5134 protein_coding retained_intron MGP_129S1SvImJ_T0026571.1 MGP_129S1SvImJ_G0017574.1 mouse_genomes_project 10 82885212 82901656 - MGP_129S1SvImJ_P0026571 Zfp938 protein_coding protein_coding MGP_129S1SvImJ_T0026572.1 MGP_129S1SvImJ_G0017574.1 mouse_genomes_project 10 82885216 82901663 - MGP_129S1SvImJ_P0026572 Zfp938 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026374.1 MGP_129S1SvImJ_G0017533.1 mouse_genomes_project 10 81720389 81736497 - MGP_129S1SvImJ_P0026374 Sgta protein_coding unknown_likely_coding MGP_129S1SvImJ_T0026375.1 MGP_129S1SvImJ_G0017533.1 mouse_genomes_project 10 81720395 81736499 - MGP_129S1SvImJ_P0026375 Sgta protein_coding protein_coding MGP_129S1SvImJ_T0026146.1 MGP_129S1SvImJ_G0017478.1 mouse_genomes_project 10 80589569 80606660 + MGP_129S1SvImJ_P0026146 Hmha1 protein_coding protein_coding MGP_129S1SvImJ_T0026147.1 MGP_129S1SvImJ_G0017478.1 mouse_genomes_project 10 80589655 80606657 + Hmha1 protein_coding retained_intron MGP_129S1SvImJ_T0026148.1 MGP_129S1SvImJ_G0017478.1 mouse_genomes_project 10 80589832 80606657 + MGP_129S1SvImJ_P0026148 Hmha1 protein_coding protein_coding MGP_129S1SvImJ_T0026149.1 MGP_129S1SvImJ_G0017478.1 mouse_genomes_project 10 80592334 80606656 + MGP_129S1SvImJ_P0026149 Hmha1 protein_coding protein_coding MGP_129S1SvImJ_T0026150.1 MGP_129S1SvImJ_G0017478.1 mouse_genomes_project 10 80594424 80606650 + Hmha1 protein_coding retained_intron MGP_129S1SvImJ_T0006180.1 MGP_129S1SvImJ_G0005160.1 mouse_genomes_project 10 122141790 122152185 + 1700064J06Rik lincRNA lincRNA MGP_129S1SvImJ_T0099165.1 MGP_129S1SvImJ_G0037232.1 mouse_genomes_project 10 28703922 28704024 + Gm22623 snRNA snRNA MGP_129S1SvImJ_T0027588.1 MGP_129S1SvImJ_G0017909.1 mouse_genomes_project 10 133292863 133293802 + MGP_129S1SvImJ_P0027588 Gm44444 protein_coding protein_coding MGP_129S1SvImJ_T0025177.1 MGP_129S1SvImJ_G0017218.1 mouse_genomes_project 10 50820268 50869825 + Rfx6 protein_coding retained_intron MGP_129S1SvImJ_T0025178.1 MGP_129S1SvImJ_G0017218.1 mouse_genomes_project 10 50820268 50879187 + MGP_129S1SvImJ_P0025178 Rfx6 protein_coding protein_coding MGP_129S1SvImJ_T0025179.1 MGP_129S1SvImJ_G0017218.1 mouse_genomes_project 10 50828032 50879187 + MGP_129S1SvImJ_P0025179 Rfx6 protein_coding protein_coding MGP_129S1SvImJ_T0026712.1 MGP_129S1SvImJ_G0017618.1 mouse_genomes_project 10 88513937 88516779 - MGP_129S1SvImJ_P0026712 Ascl1 protein_coding protein_coding MGP_129S1SvImJ_T0025998.1 MGP_129S1SvImJ_G0017427.1 mouse_genomes_project 10 79078204 79084524 - MGP_129S1SvImJ_P0025998 Olfr1357 protein_coding protein_coding MGP_129S1SvImJ_T0025999.1 MGP_129S1SvImJ_G0017427.1 mouse_genomes_project 10 79078204 79079216 - MGP_129S1SvImJ_P0025999 Olfr1357 protein_coding protein_coding MGP_129S1SvImJ_T0026000.1 MGP_129S1SvImJ_G0017427.1 mouse_genomes_project 10 79078468 79084524 - MGP_129S1SvImJ_P0026000 Olfr1357 protein_coding protein_coding MGP_129S1SvImJ_T0009635.1 MGP_129S1SvImJ_G0007751.1 mouse_genomes_project 10 106349927 106350035 + Mir6411 miRNA miRNA MGP_129S1SvImJ_T0006085.1 MGP_129S1SvImJ_G0005096.1 mouse_genomes_project 10 1382206 1387047 + Gm21781 lincRNA lincRNA MGP_129S1SvImJ_T0009600.1 MGP_129S1SvImJ_G0007716.1 mouse_genomes_project 10 61146034 61146119 + Mir5108 miRNA miRNA MGP_129S1SvImJ_T0024739.1 MGP_129S1SvImJ_G0017055.1 mouse_genomes_project 10 18091615 18106438 + MGP_129S1SvImJ_P0024739 Mtfr2 protein_coding protein_coding MGP_129S1SvImJ_T0025994.1 MGP_129S1SvImJ_G0017423.1 mouse_genomes_project 10 78891371 78920219 - MGP_129S1SvImJ_P0025994 Pdxk protein_coding protein_coding MGP_129S1SvImJ_T0025154.1 MGP_129S1SvImJ_G0017210.1 mouse_genomes_project 10 44473466 44610025 + MGP_129S1SvImJ_P0025154 Hace1 protein_coding protein_coding MGP_129S1SvImJ_T0025155.1 MGP_129S1SvImJ_G0017210.1 mouse_genomes_project 10 44473778 44502443 + MGP_129S1SvImJ_P0025155 Hace1 protein_coding protein_coding MGP_129S1SvImJ_T0025156.1 MGP_129S1SvImJ_G0017210.1 mouse_genomes_project 10 44473917 44502397 + Hace1 protein_coding processed_transcript MGP_129S1SvImJ_T0025157.1 MGP_129S1SvImJ_G0017210.1 mouse_genomes_project 10 44482061 44545393 + Hace1 protein_coding processed_transcript MGP_129S1SvImJ_T0025158.1 MGP_129S1SvImJ_G0017210.1 mouse_genomes_project 10 44569047 44609839 + MGP_129S1SvImJ_P0025158 Hace1 protein_coding protein_coding MGP_129S1SvImJ_T0025159.1 MGP_129S1SvImJ_G0017210.1 mouse_genomes_project 10 44570091 44609839 + MGP_129S1SvImJ_P0025159 Hace1 protein_coding protein_coding MGP_129S1SvImJ_T0025160.1 MGP_129S1SvImJ_G0017210.1 mouse_genomes_project 10 44574650 44609951 + Hace1 protein_coding retained_intron MGP_129S1SvImJ_T0102110.1 MGP_129S1SvImJ_G0039945.1 mouse_genomes_project 10 19930903 19934212 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0024728.1 MGP_129S1SvImJ_G0017053.1 mouse_genomes_project 10 18053186 18054975 - MGP_129S1SvImJ_P0024728 4933406P04Rik protein_coding protein_coding MGP_129S1SvImJ_T0025782.1 MGP_129S1SvImJ_G0017364.1 mouse_genomes_project 10 75959728 75967023 - MGP_129S1SvImJ_P0025782 Gstt3 protein_coding protein_coding MGP_129S1SvImJ_T0025783.1 MGP_129S1SvImJ_G0017364.1 mouse_genomes_project 10 75960413 75962874 - Gstt3 protein_coding processed_transcript MGP_129S1SvImJ_T0025784.1 MGP_129S1SvImJ_G0017364.1 mouse_genomes_project 10 75960533 75966627 - MGP_129S1SvImJ_P0025784 Gstt3 protein_coding protein_coding MGP_129S1SvImJ_T0025785.1 MGP_129S1SvImJ_G0017364.1 mouse_genomes_project 10 75961013 75962478 - MGP_129S1SvImJ_P0025785 Gstt3 protein_coding protein_coding MGP_129S1SvImJ_T0025786.1 MGP_129S1SvImJ_G0017364.1 mouse_genomes_project 10 75962367 75966659 - MGP_129S1SvImJ_P0025786 Gstt3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0000841.1 MGP_129S1SvImJ_G0000775.1 mouse_genomes_project 10 38765654 38768879 - TEC TEC MGP_129S1SvImJ_T0006163.1 MGP_129S1SvImJ_G0005149.1 mouse_genomes_project 10 96974464 96985719 + 5730420D15Rik lincRNA lincRNA MGP_129S1SvImJ_T0027329.1 MGP_129S1SvImJ_G0017811.1 mouse_genomes_project 10 130771770 130778138 - MGP_129S1SvImJ_P0027329 Dtx3 protein_coding protein_coding MGP_129S1SvImJ_T0027330.1 MGP_129S1SvImJ_G0017811.1 mouse_genomes_project 10 130771770 130778138 - MGP_129S1SvImJ_P0027330 Dtx3 protein_coding protein_coding MGP_129S1SvImJ_T0027331.1 MGP_129S1SvImJ_G0017811.1 mouse_genomes_project 10 130772033 130778156 - MGP_129S1SvImJ_P0027331 Dtx3 protein_coding protein_coding MGP_129S1SvImJ_T0027332.1 MGP_129S1SvImJ_G0017811.1 mouse_genomes_project 10 130772217 130776901 - MGP_129S1SvImJ_P0027332 Dtx3 protein_coding protein_coding MGP_129S1SvImJ_T0027333.1 MGP_129S1SvImJ_G0017811.1 mouse_genomes_project 10 130775649 130778157 - MGP_129S1SvImJ_P0027333 Dtx3 protein_coding protein_coding MGP_129S1SvImJ_T0027334.1 MGP_129S1SvImJ_G0017811.1 mouse_genomes_project 10 130776178 130778148 - Dtx3 protein_coding retained_intron MGP_129S1SvImJ_T0009606.1 MGP_129S1SvImJ_G0007722.1 mouse_genomes_project 10 78779967 78780025 - Mir7659 miRNA miRNA MGP_129S1SvImJ_T0027513.1 MGP_129S1SvImJ_G0017868.1 mouse_genomes_project 10 132240244 132245727 - MGP_129S1SvImJ_P0027513 Myl6b protein_coding protein_coding MGP_129S1SvImJ_T0098803.1 MGP_129S1SvImJ_G0036887.1 mouse_genomes_project 10 95154571 95155280 + sense_intronic sense_intronic MGP_129S1SvImJ_T0026156.1 MGP_129S1SvImJ_G0017480.1 mouse_genomes_project 10 80626674 80637483 + protein_coding processed_transcript MGP_129S1SvImJ_T0026157.1 MGP_129S1SvImJ_G0017480.1 mouse_genomes_project 10 80632987 80637483 + MGP_129S1SvImJ_P0026157 protein_coding protein_coding MGP_129S1SvImJ_T0026158.1 MGP_129S1SvImJ_G0017480.1 mouse_genomes_project 10 80633534 80636151 + protein_coding processed_transcript MGP_129S1SvImJ_T0026159.1 MGP_129S1SvImJ_G0017480.1 mouse_genomes_project 10 80633536 80637483 + MGP_129S1SvImJ_P0026159 protein_coding protein_coding MGP_129S1SvImJ_T0026160.1 MGP_129S1SvImJ_G0017480.1 mouse_genomes_project 10 80633964 80637438 + MGP_129S1SvImJ_P0026160 protein_coding protein_coding MGP_129S1SvImJ_T0026161.1 MGP_129S1SvImJ_G0017480.1 mouse_genomes_project 10 80634527 80637262 + MGP_129S1SvImJ_P0026161 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0026162.1 MGP_129S1SvImJ_G0017480.1 mouse_genomes_project 10 80636937 80637409 + protein_coding retained_intron MGP_129S1SvImJ_T0026163.1 MGP_129S1SvImJ_G0017480.1 mouse_genomes_project 10 80637041 80637407 + protein_coding retained_intron MGP_129S1SvImJ_T0027326.1 MGP_129S1SvImJ_G0017810.1 mouse_genomes_project 10 130763909 130769740 - MGP_129S1SvImJ_P0027326 Arhgef25 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0027327.1 MGP_129S1SvImJ_G0017810.1 mouse_genomes_project 10 130763912 130771447 - MGP_129S1SvImJ_P0027327 Arhgef25 protein_coding protein_coding MGP_129S1SvImJ_T0027328.1 MGP_129S1SvImJ_G0017810.1 mouse_genomes_project 10 130763912 130771216 - MGP_129S1SvImJ_P0027328 Arhgef25 protein_coding protein_coding MGP_129S1SvImJ_T0024886.1 MGP_129S1SvImJ_G0017113.1 mouse_genomes_project 10 27522650 27540895 - MGP_129S1SvImJ_P0024886 Rnf146 protein_coding protein_coding MGP_129S1SvImJ_T0024887.1 MGP_129S1SvImJ_G0017113.1 mouse_genomes_project 10 27524643 27540895 - MGP_129S1SvImJ_P0024887 Rnf146 protein_coding protein_coding MGP_129S1SvImJ_T0024888.1 MGP_129S1SvImJ_G0017113.1 mouse_genomes_project 10 27524648 27540493 - MGP_129S1SvImJ_P0024888 Rnf146 protein_coding protein_coding MGP_129S1SvImJ_T0024889.1 MGP_129S1SvImJ_G0017113.1 mouse_genomes_project 10 27525109 27536165 - MGP_129S1SvImJ_P0024889 Rnf146 protein_coding protein_coding MGP_129S1SvImJ_T0024890.1 MGP_129S1SvImJ_G0017113.1 mouse_genomes_project 10 27525670 27540476 - MGP_129S1SvImJ_P0024890 Rnf146 protein_coding protein_coding MGP_129S1SvImJ_T0024846.1 MGP_129S1SvImJ_G0017100.1 mouse_genomes_project 10 24032484 24124104 - MGP_129S1SvImJ_P0024846 Tmem200a protein_coding protein_coding MGP_129S1SvImJ_T0026431.1 MGP_129S1SvImJ_G0017547.1 mouse_genomes_project 10 81975802 81980699 + MGP_129S1SvImJ_P0026431 Apba3 protein_coding protein_coding MGP_129S1SvImJ_T0025587.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69412451 69766296 + protein_coding retained_intron MGP_129S1SvImJ_T0025588.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69412451 69604998 + protein_coding processed_transcript MGP_129S1SvImJ_T0025589.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69412451 69929867 + MGP_129S1SvImJ_P0025589 protein_coding protein_coding MGP_129S1SvImJ_T0025590.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69412494 69744635 + protein_coding retained_intron MGP_129S1SvImJ_T0025591.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69412522 69927081 + MGP_129S1SvImJ_P0025591 protein_coding protein_coding MGP_129S1SvImJ_T0025592.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69412526 69927337 + MGP_129S1SvImJ_P0025592 protein_coding protein_coding MGP_129S1SvImJ_T0025593.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69412526 69927337 + MGP_129S1SvImJ_P0025593 protein_coding protein_coding MGP_129S1SvImJ_T0025594.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69412744 69717802 + MGP_129S1SvImJ_P0025594 protein_coding protein_coding MGP_129S1SvImJ_T0025595.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69412887 69926321 + MGP_129S1SvImJ_P0025595 protein_coding protein_coding MGP_129S1SvImJ_T0025596.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69412901 69918104 + MGP_129S1SvImJ_P0025596 protein_coding protein_coding MGP_129S1SvImJ_T0025597.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69412901 69918104 + MGP_129S1SvImJ_P0025597 protein_coding protein_coding MGP_129S1SvImJ_T0025598.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69412901 69918104 + MGP_129S1SvImJ_P0025598 protein_coding protein_coding MGP_129S1SvImJ_T0025599.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69412901 69918104 + MGP_129S1SvImJ_P0025599 protein_coding protein_coding MGP_129S1SvImJ_T0025600.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69412901 69918104 + MGP_129S1SvImJ_P0025600 protein_coding protein_coding MGP_129S1SvImJ_T0025601.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69589527 69593706 + protein_coding retained_intron MGP_129S1SvImJ_T0025602.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69589599 69918102 + MGP_129S1SvImJ_P0025602 protein_coding protein_coding MGP_129S1SvImJ_T0025603.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69589703 69896480 + protein_coding retained_intron MGP_129S1SvImJ_T0025604.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69589707 69715357 + protein_coding retained_intron MGP_129S1SvImJ_T0025605.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69675622 69701331 + protein_coding retained_intron MGP_129S1SvImJ_T0025606.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69675633 69752373 + MGP_129S1SvImJ_P0025606 protein_coding protein_coding MGP_129S1SvImJ_T0025607.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69677570 69744056 + MGP_129S1SvImJ_P0025607 protein_coding protein_coding MGP_129S1SvImJ_T0025608.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69792885 69926376 + MGP_129S1SvImJ_P0025608 protein_coding protein_coding MGP_129S1SvImJ_T0025609.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69793823 69874589 + MGP_129S1SvImJ_P0025609 protein_coding protein_coding MGP_129S1SvImJ_T0025610.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69809283 69850409 + protein_coding retained_intron MGP_129S1SvImJ_T0025611.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69821637 69822481 + protein_coding retained_intron MGP_129S1SvImJ_T0025612.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69821637 69926412 + MGP_129S1SvImJ_P0025612 protein_coding protein_coding MGP_129S1SvImJ_T0025613.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69821674 69927409 + MGP_129S1SvImJ_P0025613 protein_coding protein_coding MGP_129S1SvImJ_T0025614.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69821915 69927337 + MGP_129S1SvImJ_P0025614 protein_coding protein_coding MGP_129S1SvImJ_T0025615.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69821915 69927337 + MGP_129S1SvImJ_P0025615 protein_coding protein_coding MGP_129S1SvImJ_T0025616.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69821915 69927337 + MGP_129S1SvImJ_P0025616 protein_coding protein_coding MGP_129S1SvImJ_T0025617.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69821947 69918276 + MGP_129S1SvImJ_P0025617 protein_coding protein_coding MGP_129S1SvImJ_T0025618.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69821961 69895750 + protein_coding retained_intron MGP_129S1SvImJ_T0025619.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69822096 69927098 + MGP_129S1SvImJ_P0025619 protein_coding protein_coding MGP_129S1SvImJ_T0025620.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69822222 69927081 + MGP_129S1SvImJ_P0025620 protein_coding protein_coding MGP_129S1SvImJ_T0025621.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69822275 69926450 + MGP_129S1SvImJ_P0025621 protein_coding protein_coding MGP_129S1SvImJ_T0025622.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69874500 69883552 + protein_coding retained_intron MGP_129S1SvImJ_T0025623.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69879720 69900677 + MGP_129S1SvImJ_P0025623 protein_coding protein_coding MGP_129S1SvImJ_T0025624.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69880611 69887350 + MGP_129S1SvImJ_P0025624 protein_coding protein_coding MGP_129S1SvImJ_T0025625.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69881572 69927337 + MGP_129S1SvImJ_P0025625 protein_coding protein_coding MGP_129S1SvImJ_T0025626.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69883373 69900882 + protein_coding retained_intron MGP_129S1SvImJ_T0025627.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69889088 69927083 + MGP_129S1SvImJ_P0025627 protein_coding protein_coding MGP_129S1SvImJ_T0025628.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69891174 69926902 + MGP_129S1SvImJ_P0025628 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025629.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69893330 69899347 + MGP_129S1SvImJ_P0025629 protein_coding protein_coding MGP_129S1SvImJ_T0025630.1 MGP_129S1SvImJ_G0017335.1 mouse_genomes_project 10 69895542 69905903 + protein_coding retained_intron MGP_129S1SvImJ_T0006181.1 MGP_129S1SvImJ_G0005161.1 mouse_genomes_project 10 122499755 122513820 + 1700025F24Rik lincRNA lincRNA MGP_129S1SvImJ_T0026443.1 MGP_129S1SvImJ_G0017550.1 mouse_genomes_project 10 82033494 82038643 + MGP_129S1SvImJ_P0026443 Cactin protein_coding protein_coding MGP_129S1SvImJ_T0025194.1 MGP_129S1SvImJ_G0017225.1 mouse_genomes_project 10 51546082 51559889 + MGP_129S1SvImJ_P0025194 Nepn protein_coding protein_coding MGP_129S1SvImJ_T0025195.1 MGP_129S1SvImJ_G0017225.1 mouse_genomes_project 10 51548714 51563540 + MGP_129S1SvImJ_P0025195 Nepn protein_coding protein_coding MGP_129S1SvImJ_T0009657.1 MGP_129S1SvImJ_G0007773.1 mouse_genomes_project 10 132312747 132312866 - miRNA miRNA MGP_129S1SvImJ_T0026896.1 MGP_129S1SvImJ_G0017658.1 mouse_genomes_project 10 95294782 95332095 - MGP_129S1SvImJ_P0026896 Metap2 protein_coding protein_coding MGP_129S1SvImJ_T0026897.1 MGP_129S1SvImJ_G0017658.1 mouse_genomes_project 10 95296116 95301103 - Metap2 protein_coding retained_intron MGP_129S1SvImJ_T0026898.1 MGP_129S1SvImJ_G0017658.1 mouse_genomes_project 10 95297217 95333487 - MGP_129S1SvImJ_P0026898 Metap2 protein_coding protein_coding MGP_129S1SvImJ_T0026899.1 MGP_129S1SvImJ_G0017658.1 mouse_genomes_project 10 95297218 95332056 - MGP_129S1SvImJ_P0026899 Metap2 protein_coding protein_coding MGP_129S1SvImJ_T0026900.1 MGP_129S1SvImJ_G0017658.1 mouse_genomes_project 10 95297218 95332065 - MGP_129S1SvImJ_P0026900 Metap2 protein_coding protein_coding MGP_129S1SvImJ_T0026901.1 MGP_129S1SvImJ_G0017658.1 mouse_genomes_project 10 95297870 95309730 - MGP_129S1SvImJ_P0026901 Metap2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026902.1 MGP_129S1SvImJ_G0017658.1 mouse_genomes_project 10 95298509 95301038 - Metap2 protein_coding retained_intron MGP_129S1SvImJ_T0026903.1 MGP_129S1SvImJ_G0017658.1 mouse_genomes_project 10 95306913 95309588 - Metap2 protein_coding retained_intron MGP_129S1SvImJ_T0026904.1 MGP_129S1SvImJ_G0017658.1 mouse_genomes_project 10 95307010 95331897 - MGP_129S1SvImJ_P0026904 Metap2 protein_coding protein_coding MGP_129S1SvImJ_T0026905.1 MGP_129S1SvImJ_G0017658.1 mouse_genomes_project 10 95308267 95332095 - MGP_129S1SvImJ_P0026905 Metap2 protein_coding protein_coding MGP_129S1SvImJ_T0026906.1 MGP_129S1SvImJ_G0017658.1 mouse_genomes_project 10 95317609 95332009 - Metap2 protein_coding retained_intron MGP_129S1SvImJ_T0026907.1 MGP_129S1SvImJ_G0017658.1 mouse_genomes_project 10 95317688 95332042 - Metap2 protein_coding retained_intron MGP_129S1SvImJ_T0026908.1 MGP_129S1SvImJ_G0017658.1 mouse_genomes_project 10 95331971 95332579 - Metap2 protein_coding processed_transcript MGP_129S1SvImJ_T0026909.1 MGP_129S1SvImJ_G0017658.1 mouse_genomes_project 10 95332208 95333414 - Metap2 protein_coding processed_transcript MGP_129S1SvImJ_T0026910.1 MGP_129S1SvImJ_G0017658.1 mouse_genomes_project 10 95332325 95339287 - Metap2 protein_coding processed_transcript MGP_129S1SvImJ_T0024799.1 MGP_129S1SvImJ_G0017080.1 mouse_genomes_project 10 21906779 21907793 + MGP_129S1SvImJ_P0024799 Taar5 protein_coding protein_coding MGP_129S1SvImJ_T0026981.1 MGP_129S1SvImJ_G0017689.1 mouse_genomes_project 10 101871848 101963601 + MGP_129S1SvImJ_P0026981 Kitl protein_coding protein_coding MGP_129S1SvImJ_T0026982.1 MGP_129S1SvImJ_G0017689.1 mouse_genomes_project 10 101872044 101938973 + MGP_129S1SvImJ_P0026982 Kitl protein_coding protein_coding MGP_129S1SvImJ_T0026983.1 MGP_129S1SvImJ_G0017689.1 mouse_genomes_project 10 101872134 101959589 + MGP_129S1SvImJ_P0026983 Kitl protein_coding protein_coding MGP_129S1SvImJ_T0012442.1 MGP_129S1SvImJ_G0010531.1 mouse_genomes_project 10 74987109 74987541 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0025245.1 MGP_129S1SvImJ_G0017244.1 mouse_genomes_project 10 57321260 57322801 - MGP_129S1SvImJ_P0025245 Gm4981 protein_coding protein_coding MGP_129S1SvImJ_T0024498.1 MGP_129S1SvImJ_G0016994.1 mouse_genomes_project 10 4792274 4813071 + MGP_129S1SvImJ_P0024498 Lrp11 protein_coding protein_coding MGP_129S1SvImJ_T0024499.1 MGP_129S1SvImJ_G0016994.1 mouse_genomes_project 10 4792291 4839368 + MGP_129S1SvImJ_P0024499 Lrp11 protein_coding protein_coding MGP_129S1SvImJ_T0024500.1 MGP_129S1SvImJ_G0016994.1 mouse_genomes_project 10 4792453 4839368 + MGP_129S1SvImJ_P0024500 Lrp11 protein_coding protein_coding MGP_129S1SvImJ_T0024501.1 MGP_129S1SvImJ_G0016994.1 mouse_genomes_project 10 4792601 4837907 + MGP_129S1SvImJ_P0024501 Lrp11 protein_coding protein_coding MGP_129S1SvImJ_T0024502.1 MGP_129S1SvImJ_G0016994.1 mouse_genomes_project 10 4799228 4837637 + MGP_129S1SvImJ_P0024502 Lrp11 protein_coding protein_coding MGP_129S1SvImJ_T0026974.1 MGP_129S1SvImJ_G0017685.1 mouse_genomes_project 10 100932358 100933484 - MGP_129S1SvImJ_P0026974 Phxr2 protein_coding protein_coding MGP_129S1SvImJ_T0027573.1 MGP_129S1SvImJ_G0017899.1 mouse_genomes_project 10 132974659 132981079 - MGP_129S1SvImJ_P0027573 Olfr770 protein_coding protein_coding MGP_129S1SvImJ_T0027574.1 MGP_129S1SvImJ_G0017899.1 mouse_genomes_project 10 132974659 132975595 - MGP_129S1SvImJ_P0027574 Olfr770 protein_coding protein_coding MGP_129S1SvImJ_T0027575.1 MGP_129S1SvImJ_G0017899.1 mouse_genomes_project 10 132975205 132981822 - MGP_129S1SvImJ_P0027575 Olfr770 protein_coding protein_coding MGP_129S1SvImJ_T0027576.1 MGP_129S1SvImJ_G0017899.1 mouse_genomes_project 10 132975272 132981826 - MGP_129S1SvImJ_P0027576 Olfr770 protein_coding protein_coding MGP_129S1SvImJ_T0099197.1 MGP_129S1SvImJ_G0037264.1 mouse_genomes_project 10 89234302 89234417 - Gm26357 snRNA snRNA MGP_129S1SvImJ_T0026592.1 MGP_129S1SvImJ_G0017579.1 mouse_genomes_project 10 83438102 83451014 + Hcfc2 protein_coding processed_transcript MGP_129S1SvImJ_T0026593.1 MGP_129S1SvImJ_G0017579.1 mouse_genomes_project 10 83440959 83483590 + MGP_129S1SvImJ_P0026593 Hcfc2 protein_coding protein_coding MGP_129S1SvImJ_T0026594.1 MGP_129S1SvImJ_G0017579.1 mouse_genomes_project 10 83441163 83454187 + MGP_129S1SvImJ_P0026594 Hcfc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026595.1 MGP_129S1SvImJ_G0017579.1 mouse_genomes_project 10 83470299 83482574 + MGP_129S1SvImJ_P0026595 Hcfc2 protein_coding protein_coding MGP_129S1SvImJ_T0025024.1 MGP_129S1SvImJ_G0017171.1 mouse_genomes_project 10 39952130 40082644 + MGP_129S1SvImJ_P0025024 Ak9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0025025.1 MGP_129S1SvImJ_G0017171.1 mouse_genomes_project 10 39952170 39994536 + MGP_129S1SvImJ_P0025025 Ak9 protein_coding protein_coding MGP_129S1SvImJ_T0025026.1 MGP_129S1SvImJ_G0017171.1 mouse_genomes_project 10 39997956 40083890 + MGP_129S1SvImJ_P0025026 Ak9 protein_coding protein_coding MGP_129S1SvImJ_T0098805.1 MGP_129S1SvImJ_G0036889.1 mouse_genomes_project 10 123999404 124000520 - Gm15961 sense_intronic sense_intronic MGP_129S1SvImJ_T0027570.1 MGP_129S1SvImJ_G0017896.1 mouse_genomes_project 10 132896246 132915684 - MGP_129S1SvImJ_P0027570 protein_coding protein_coding MGP_129S1SvImJ_T0025171.1 MGP_129S1SvImJ_G0017213.1 mouse_genomes_project 10 49992455 50098405 + MGP_129S1SvImJ_P0025171 Sim1 protein_coding protein_coding MGP_129S1SvImJ_T0024840.1 MGP_129S1SvImJ_G0017098.1 mouse_genomes_project 10 23387604 23557086 + MGP_129S1SvImJ_P0024840 Epb41l2 protein_coding protein_coding MGP_129S1SvImJ_T0024841.1 MGP_129S1SvImJ_G0017098.1 mouse_genomes_project 10 23387746 23524050 + MGP_129S1SvImJ_P0024841 Epb41l2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0024842.1 MGP_129S1SvImJ_G0017098.1 mouse_genomes_project 10 23440109 23557086 + MGP_129S1SvImJ_P0024842 Epb41l2 protein_coding protein_coding MGP_129S1SvImJ_T0024843.1 MGP_129S1SvImJ_G0017098.1 mouse_genomes_project 10 23525970 23557089 + MGP_129S1SvImJ_P0024843 Epb41l2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0026774.1 MGP_129S1SvImJ_G0017632.1 mouse_genomes_project 10 89872755 89959292 - MGP_129S1SvImJ_P0026774 Utp20 protein_coding protein_coding MGP_129S1SvImJ_T0025563.1 MGP_129S1SvImJ_G0017330.1 mouse_genomes_project 10 68245522 68368330 - MGP_129S1SvImJ_P0025563 1700040L02Rik protein_coding protein_coding MGP_129S1SvImJ_T0025564.1 MGP_129S1SvImJ_G0017330.1 mouse_genomes_project 10 68253474 68352179 - MGP_129S1SvImJ_P0025564 1700040L02Rik protein_coding protein_coding MGP_129S1SvImJ_T0011299.1 MGP_129S1SvImJ_G0009415.1 mouse_genomes_project 10 93435767 93436030 - Gm27588 misc_RNA misc_RNA MGP_129S1SvImJ_T0009644.1 MGP_129S1SvImJ_G0007760.1 mouse_genomes_project 10 126326596 126326681 - Mirlet7i miRNA miRNA MGP_129S1SvImJ_T0003091.1 MGP_129S1SvImJ_G0002886.1 mouse_genomes_project 10 87050013 87067328 + 4930486F22Rik antisense antisense MGP_129S1SvImJ_T0024579.1 MGP_129S1SvImJ_G0017013.1 mouse_genomes_project 10 8651211 8668926 + MGP_129S1SvImJ_P0024579 Fbxo30 protein_coding protein_coding MGP_129S1SvImJ_T0024580.1 MGP_129S1SvImJ_G0017013.1 mouse_genomes_project 10 8652255 8666345 + MGP_129S1SvImJ_P0024580 Fbxo30 protein_coding protein_coding MGP_129S1SvImJ_T0006136.1 MGP_129S1SvImJ_G0005136.1 mouse_genomes_project 10 83560806 83576781 + 1700028I16Rik lincRNA lincRNA MGP_129S1SvImJ_T0012426.1 MGP_129S1SvImJ_G0010515.1 mouse_genomes_project 10 43887141 43888979 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0026990.1 MGP_129S1SvImJ_G0017693.1 mouse_genomes_project 10 102459091 102473132 + MGP_129S1SvImJ_P0026990 1700017N19Rik protein_coding protein_coding MGP_129S1SvImJ_T0026991.1 MGP_129S1SvImJ_G0017693.1 mouse_genomes_project 10 102460930 102488081 + MGP_129S1SvImJ_P0026991 1700017N19Rik protein_coding protein_coding MGP_129S1SvImJ_T0026992.1 MGP_129S1SvImJ_G0017693.1 mouse_genomes_project 10 102460950 102488166 + MGP_129S1SvImJ_P0026992 1700017N19Rik protein_coding protein_coding MGP_129S1SvImJ_T0026993.1 MGP_129S1SvImJ_G0017693.1 mouse_genomes_project 10 102460956 102482278 + MGP_129S1SvImJ_P0026993 1700017N19Rik protein_coding protein_coding MGP_129S1SvImJ_T0026994.1 MGP_129S1SvImJ_G0017693.1 mouse_genomes_project 10 102460961 102488160 + MGP_129S1SvImJ_P0026994 1700017N19Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026995.1 MGP_129S1SvImJ_G0017693.1 mouse_genomes_project 10 102460965 102488160 + MGP_129S1SvImJ_P0026995 1700017N19Rik protein_coding protein_coding MGP_129S1SvImJ_T0026996.1 MGP_129S1SvImJ_G0017693.1 mouse_genomes_project 10 102460976 102488083 + MGP_129S1SvImJ_P0026996 1700017N19Rik protein_coding protein_coding MGP_129S1SvImJ_T0026997.1 MGP_129S1SvImJ_G0017693.1 mouse_genomes_project 10 102460988 102488170 + MGP_129S1SvImJ_P0026997 1700017N19Rik protein_coding protein_coding MGP_129S1SvImJ_T0026998.1 MGP_129S1SvImJ_G0017693.1 mouse_genomes_project 10 102478915 102488078 + MGP_129S1SvImJ_P0026998 1700017N19Rik protein_coding protein_coding MGP_129S1SvImJ_T0006086.1 MGP_129S1SvImJ_G0005097.1 mouse_genomes_project 10 6168876 6171153 + Gm26674 lincRNA lincRNA MGP_129S1SvImJ_T0027131.1 MGP_129S1SvImJ_G0017744.1 mouse_genomes_project 10 119062779 119158258 + MGP_129S1SvImJ_P0027131 Ptprb protein_coding protein_coding MGP_129S1SvImJ_T0099172.1 MGP_129S1SvImJ_G0037239.1 mouse_genomes_project 10 43596972 43597087 + Gm22503 snRNA snRNA MGP_129S1SvImJ_T0009582.1 MGP_129S1SvImJ_G0007698.1 mouse_genomes_project 10 5064340 5064434 + Mir5104 miRNA miRNA MGP_129S1SvImJ_T0011300.1 MGP_129S1SvImJ_G0009416.1 mouse_genomes_project 10 93437817 93438020 - Gm27753 misc_RNA misc_RNA MGP_129S1SvImJ_T0100459.1 MGP_129S1SvImJ_G0038526.1 mouse_genomes_project 10 113898320 113898464 + Gm25117 snoRNA snoRNA MGP_129S1SvImJ_T0099163.1 MGP_129S1SvImJ_G0037230.1 mouse_genomes_project 10 22891882 22891989 + Gm23410 snRNA snRNA MGP_129S1SvImJ_T0027585.1 MGP_129S1SvImJ_G0017907.1 mouse_genomes_project 10 133212535 133217389 + MGP_129S1SvImJ_P0027585 Olfr781 protein_coding protein_coding MGP_129S1SvImJ_T0027586.1 MGP_129S1SvImJ_G0017907.1 mouse_genomes_project 10 133216453 133217389 + MGP_129S1SvImJ_P0027586 Olfr781 protein_coding protein_coding MGP_129S1SvImJ_T0099216.1 MGP_129S1SvImJ_G0037283.1 mouse_genomes_project 10 131014850 131014959 - Gm23819 snRNA snRNA MGP_129S1SvImJ_T0026772.1 MGP_129S1SvImJ_G0017631.1 mouse_genomes_project 10 89855924 89860985 + MGP_129S1SvImJ_P0026772 Arl1 protein_coding protein_coding MGP_129S1SvImJ_T0026773.1 MGP_129S1SvImJ_G0017631.1 mouse_genomes_project 10 89856627 89868426 + MGP_129S1SvImJ_P0026773 Arl1 protein_coding protein_coding MGP_129S1SvImJ_T0026893.1 MGP_129S1SvImJ_G0017656.1 mouse_genomes_project 10 95063067 95068168 + MGP_129S1SvImJ_P0026893 Ntn4 protein_coding protein_coding MGP_129S1SvImJ_T0026894.1 MGP_129S1SvImJ_G0017656.1 mouse_genomes_project 10 95063435 95175537 + MGP_129S1SvImJ_P0026894 Ntn4 protein_coding protein_coding MGP_129S1SvImJ_T0025314.1 MGP_129S1SvImJ_G0017265.1 mouse_genomes_project 10 59321463 59347271 + Spock2 protein_coding retained_intron MGP_129S1SvImJ_T0025315.1 MGP_129S1SvImJ_G0017265.1 mouse_genomes_project 10 59321463 59355012 + MGP_129S1SvImJ_P0025315 Spock2 protein_coding protein_coding MGP_129S1SvImJ_T0025316.1 MGP_129S1SvImJ_G0017265.1 mouse_genomes_project 10 59321712 59353722 + MGP_129S1SvImJ_P0025316 Spock2 protein_coding protein_coding MGP_129S1SvImJ_T0027636.1 MGP_129S1SvImJ_G0017943.1 mouse_genomes_project 10 133978001 133982314 + MGP_129S1SvImJ_P0027636 Olfr821 protein_coding protein_coding MGP_129S1SvImJ_T0027637.1 MGP_129S1SvImJ_G0017943.1 mouse_genomes_project 10 133981381 133982314 + MGP_129S1SvImJ_P0027637 Olfr821 protein_coding protein_coding MGP_129S1SvImJ_T0098441.1 MGP_129S1SvImJ_G0036526.1 mouse_genomes_project 10 96329689 96329816 - Gm24186 rRNA rRNA MGP_129S1SvImJ_T0025187.1 MGP_129S1SvImJ_G0017222.1 mouse_genomes_project 10 51376461 51471811 + MGP_129S1SvImJ_P0025187 Dcbld1 protein_coding protein_coding MGP_129S1SvImJ_T0025188.1 MGP_129S1SvImJ_G0017222.1 mouse_genomes_project 10 51376475 51434326 + Dcbld1 protein_coding retained_intron MGP_129S1SvImJ_T0025189.1 MGP_129S1SvImJ_G0017222.1 mouse_genomes_project 10 51376479 51471813 + MGP_129S1SvImJ_P0025189 Dcbld1 protein_coding protein_coding MGP_129S1SvImJ_T0006109.1 MGP_129S1SvImJ_G0005115.1 mouse_genomes_project 10 40258380 40261208 - Gm29095 lincRNA lincRNA MGP_129S1SvImJ_T0003101.1 MGP_129S1SvImJ_G0002894.1 mouse_genomes_project 10 96052092 96102416 - Tmcc3os antisense antisense MGP_129S1SvImJ_T0012405.1 MGP_129S1SvImJ_G0010494.1 mouse_genomes_project 10 11337704 11338712 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0026618.1 MGP_129S1SvImJ_G0017587.1 mouse_genomes_project 10 84354808 84407119 + MGP_129S1SvImJ_P0026618 A230046K03Rik protein_coding protein_coding MGP_129S1SvImJ_T0024616.1 MGP_129S1SvImJ_G0017021.1 mouse_genomes_project 10 10607538 10729263 - MGP_129S1SvImJ_P0024616 Phactr2 protein_coding protein_coding MGP_129S1SvImJ_T0024617.1 MGP_129S1SvImJ_G0017021.1 mouse_genomes_project 10 10613183 10796642 - MGP_129S1SvImJ_P0024617 Phactr2 protein_coding protein_coding MGP_129S1SvImJ_T0024618.1 MGP_129S1SvImJ_G0017021.1 mouse_genomes_project 10 10613183 10884928 - MGP_129S1SvImJ_P0024618 Phactr2 protein_coding protein_coding MGP_129S1SvImJ_T0024619.1 MGP_129S1SvImJ_G0017021.1 mouse_genomes_project 10 10613185 10729392 - MGP_129S1SvImJ_P0024619 Phactr2 protein_coding protein_coding MGP_129S1SvImJ_T0024620.1 MGP_129S1SvImJ_G0017021.1 mouse_genomes_project 10 10614046 10796859 - MGP_129S1SvImJ_P0024620 Phactr2 protein_coding protein_coding MGP_129S1SvImJ_T0024621.1 MGP_129S1SvImJ_G0017021.1 mouse_genomes_project 10 10786335 10796620 - Phactr2 protein_coding processed_transcript MGP_129S1SvImJ_T0003058.1 MGP_129S1SvImJ_G0002860.1 mouse_genomes_project 10 62489239 62490112 + Gm16135 antisense antisense MGP_129S1SvImJ_T0027159.1 MGP_129S1SvImJ_G0017754.1 mouse_genomes_project 10 120077859 120086921 - MGP_129S1SvImJ_P0027159 Yeats4 protein_coding protein_coding MGP_129S1SvImJ_T0027012.1 MGP_129S1SvImJ_G0017696.1 mouse_genomes_project 10 104495750 104532370 + MGP_129S1SvImJ_P0027012 Rassf9 protein_coding protein_coding MGP_129S1SvImJ_T0025125.1 MGP_129S1SvImJ_G0017194.1 mouse_genomes_project 10 42303137 42320317 - MGP_129S1SvImJ_P0025125 1700021F05Rik protein_coding protein_coding MGP_129S1SvImJ_T0025126.1 MGP_129S1SvImJ_G0017194.1 mouse_genomes_project 10 42303149 42320291 - MGP_129S1SvImJ_P0025126 1700021F05Rik protein_coding protein_coding MGP_129S1SvImJ_T0025127.1 MGP_129S1SvImJ_G0017194.1 mouse_genomes_project 10 42303175 42303860 - 1700021F05Rik protein_coding processed_transcript MGP_129S1SvImJ_T0025128.1 MGP_129S1SvImJ_G0017194.1 mouse_genomes_project 10 42312581 42320317 - 1700021F05Rik protein_coding processed_transcript MGP_129S1SvImJ_T0102112.1 MGP_129S1SvImJ_G0039947.1 mouse_genomes_project 10 78976246 78977184 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0024971.1 MGP_129S1SvImJ_G0017150.1 mouse_genomes_project 10 37641774 37655676 - MGP_129S1SvImJ_P0024971 Wisp3 protein_coding protein_coding MGP_129S1SvImJ_T0025260.1 MGP_129S1SvImJ_G0017247.1 mouse_genomes_project 10 57549457 57601122 + MGP_129S1SvImJ_P0025260 Ranbp2 protein_coding protein_coding MGP_129S1SvImJ_T0003075.1 MGP_129S1SvImJ_G0002875.1 mouse_genomes_project 10 80974759 80976021 + Gm15124 antisense antisense MGP_129S1SvImJ_T0012415.1 MGP_129S1SvImJ_G0010504.1 mouse_genomes_project 10 23871677 23872287 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006142.1 MGP_129S1SvImJ_G0005141.1 mouse_genomes_project 10 89463398 89467866 - Gm26546 lincRNA lincRNA MGP_129S1SvImJ_T0027249.1 MGP_129S1SvImJ_G0017784.1 mouse_genomes_project 10 124872438 124910934 - MGP_129S1SvImJ_P0027249 Xpot protein_coding unknown_likely_coding MGP_129S1SvImJ_T0027250.1 MGP_129S1SvImJ_G0017784.1 mouse_genomes_project 10 124872445 124914333 - MGP_129S1SvImJ_P0027250 Xpot protein_coding protein_coding MGP_129S1SvImJ_T0024875.1 MGP_129S1SvImJ_G0017108.1 mouse_genomes_project 10 27127549 27143744 - MGP_129S1SvImJ_P0024875 2310057J18Rik protein_coding protein_coding MGP_129S1SvImJ_T0024876.1 MGP_129S1SvImJ_G0017108.1 mouse_genomes_project 10 27127625 27144653 - MGP_129S1SvImJ_P0024876 2310057J18Rik protein_coding protein_coding MGP_129S1SvImJ_T0024877.1 MGP_129S1SvImJ_G0017108.1 mouse_genomes_project 10 27127627 27129451 - 2310057J18Rik protein_coding retained_intron MGP_129S1SvImJ_T0024878.1 MGP_129S1SvImJ_G0017108.1 mouse_genomes_project 10 27127627 27144663 - MGP_129S1SvImJ_P0024878 2310057J18Rik protein_coding protein_coding MGP_129S1SvImJ_T0012439.1 MGP_129S1SvImJ_G0010528.1 mouse_genomes_project 10 71999940 72000745 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0025298.1 MGP_129S1SvImJ_G0017261.1 mouse_genomes_project 10 59064840 59085340 + MGP_129S1SvImJ_P0025298 Dnajb12 protein_coding protein_coding MGP_129S1SvImJ_T0025299.1 MGP_129S1SvImJ_G0017261.1 mouse_genomes_project 10 59064848 59084052 + MGP_129S1SvImJ_P0025299 Dnajb12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025300.1 MGP_129S1SvImJ_G0017261.1 mouse_genomes_project 10 59064859 59085334 + MGP_129S1SvImJ_P0025300 Dnajb12 protein_coding protein_coding MGP_129S1SvImJ_T0025301.1 MGP_129S1SvImJ_G0017261.1 mouse_genomes_project 10 59064902 59082813 + MGP_129S1SvImJ_P0025301 Dnajb12 protein_coding protein_coding MGP_129S1SvImJ_T0025302.1 MGP_129S1SvImJ_G0017261.1 mouse_genomes_project 10 59064910 59084559 + MGP_129S1SvImJ_P0025302 Dnajb12 protein_coding protein_coding MGP_129S1SvImJ_T0027495.1 MGP_129S1SvImJ_G0017863.1 mouse_genomes_project 10 132129643 132134936 - MGP_129S1SvImJ_P0027495 Slc39a5 protein_coding protein_coding MGP_129S1SvImJ_T0027496.1 MGP_129S1SvImJ_G0017863.1 mouse_genomes_project 10 132129643 132134176 - MGP_129S1SvImJ_P0027496 Slc39a5 protein_coding protein_coding MGP_129S1SvImJ_T0025978.1 MGP_129S1SvImJ_G0017417.1 mouse_genomes_project 10 78596979 78604679 - MGP_129S1SvImJ_P0025978 D10Jhu81e protein_coding protein_coding MGP_129S1SvImJ_T0026044.1 MGP_129S1SvImJ_G0017448.1 mouse_genomes_project 10 80153579 80174189 - MGP_129S1SvImJ_P0026044 Shc2 protein_coding protein_coding MGP_129S1SvImJ_T0026045.1 MGP_129S1SvImJ_G0017448.1 mouse_genomes_project 10 80154526 80159200 - Shc2 protein_coding retained_intron MGP_129S1SvImJ_T0026046.1 MGP_129S1SvImJ_G0017448.1 mouse_genomes_project 10 80156566 80159494 - Shc2 protein_coding retained_intron MGP_129S1SvImJ_T0027080.1 MGP_129S1SvImJ_G0017723.1 mouse_genomes_project 10 114440651 114456350 + MGP_129S1SvImJ_P0027080 Krr1 protein_coding protein_coding MGP_129S1SvImJ_T0027081.1 MGP_129S1SvImJ_G0017723.1 mouse_genomes_project 10 114440744 114444503 + Krr1 protein_coding retained_intron MGP_129S1SvImJ_T0027082.1 MGP_129S1SvImJ_G0017723.1 mouse_genomes_project 10 114440762 114454818 + Krr1 protein_coding retained_intron MGP_129S1SvImJ_T0027083.1 MGP_129S1SvImJ_G0017723.1 mouse_genomes_project 10 114440780 114452605 + MGP_129S1SvImJ_P0027083 Krr1 protein_coding protein_coding MGP_129S1SvImJ_T0011294.1 MGP_129S1SvImJ_G0009410.1 mouse_genomes_project 10 75614767 75615090 + Gm25545 misc_RNA misc_RNA MGP_129S1SvImJ_T0009642.1 MGP_129S1SvImJ_G0007758.1 mouse_genomes_project 10 125962829 125962926 + Mir6412 miRNA miRNA MGP_129S1SvImJ_T0012457.1 MGP_129S1SvImJ_G0010546.1 mouse_genomes_project 10 120352117 120352616 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0025129.1 MGP_129S1SvImJ_G0017195.1 mouse_genomes_project 10 42363169 42368264 + MGP_129S1SvImJ_P0025129 Cd24a protein_coding protein_coding MGP_129S1SvImJ_T0027514.1 MGP_129S1SvImJ_G0017869.1 mouse_genomes_project 10 132257308 132272900 - MGP_129S1SvImJ_P0027514 Esyt1 protein_coding protein_coding MGP_129S1SvImJ_T0024409.1 MGP_129S1SvImJ_G0016978.1 mouse_genomes_project 10 1393908 1428049 - MGP_129S1SvImJ_P0024409 Rmnd1 protein_coding protein_coding MGP_129S1SvImJ_T0024410.1 MGP_129S1SvImJ_G0016978.1 mouse_genomes_project 10 1395302 1401663 - Rmnd1 protein_coding retained_intron MGP_129S1SvImJ_T0024411.1 MGP_129S1SvImJ_G0016978.1 mouse_genomes_project 10 1395602 1428043 - MGP_129S1SvImJ_P0024411 Rmnd1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0024412.1 MGP_129S1SvImJ_G0016978.1 mouse_genomes_project 10 1395679 1401474 - MGP_129S1SvImJ_P0024412 Rmnd1 protein_coding protein_coding MGP_129S1SvImJ_T0024413.1 MGP_129S1SvImJ_G0016978.1 mouse_genomes_project 10 1396117 1408822 - Rmnd1 protein_coding retained_intron MGP_129S1SvImJ_T0024414.1 MGP_129S1SvImJ_G0016978.1 mouse_genomes_project 10 1421658 1428005 - Rmnd1 protein_coding retained_intron MGP_129S1SvImJ_T0024415.1 MGP_129S1SvImJ_G0016978.1 mouse_genomes_project 10 1422807 1427956 - MGP_129S1SvImJ_P0024415 Rmnd1 protein_coding protein_coding MGP_129S1SvImJ_T0024416.1 MGP_129S1SvImJ_G0016978.1 mouse_genomes_project 10 1423009 1427995 - MGP_129S1SvImJ_P0024416 Rmnd1 protein_coding protein_coding MGP_129S1SvImJ_T0024417.1 MGP_129S1SvImJ_G0016978.1 mouse_genomes_project 10 1423087 1427995 - MGP_129S1SvImJ_P0024417 Rmnd1 protein_coding protein_coding MGP_129S1SvImJ_T0024418.1 MGP_129S1SvImJ_G0016978.1 mouse_genomes_project 10 1424195 1427962 - Rmnd1 protein_coding retained_intron MGP_129S1SvImJ_T0099155.1 MGP_129S1SvImJ_G0037222.1 mouse_genomes_project 10 5917311 5917417 + Gm24374 snRNA snRNA MGP_129S1SvImJ_T0025541.1 MGP_129S1SvImJ_G0017323.1 mouse_genomes_project 10 67013668 67034181 - MGP_129S1SvImJ_P0025541 Nrbf2 protein_coding protein_coding MGP_129S1SvImJ_T0025542.1 MGP_129S1SvImJ_G0017323.1 mouse_genomes_project 10 67014819 67034056 - MGP_129S1SvImJ_P0025542 Nrbf2 protein_coding protein_coding MGP_129S1SvImJ_T0027321.1 MGP_129S1SvImJ_G0017807.1 mouse_genomes_project 10 130675179 130702917 - MGP_129S1SvImJ_P0027321 Os9 protein_coding protein_coding MGP_129S1SvImJ_T0027322.1 MGP_129S1SvImJ_G0017807.1 mouse_genomes_project 10 130675179 130702917 - MGP_129S1SvImJ_P0027322 Os9 protein_coding protein_coding MGP_129S1SvImJ_T0100427.1 MGP_129S1SvImJ_G0038494.1 mouse_genomes_project 10 38806627 38806841 + Rnu3a snoRNA snoRNA MGP_129S1SvImJ_T0098437.1 MGP_129S1SvImJ_G0036522.1 mouse_genomes_project 10 40056992 40057097 - Gm27783 rRNA rRNA MGP_129S1SvImJ_T0011297.1 MGP_129S1SvImJ_G0009413.1 mouse_genomes_project 10 93409319 93409512 - Gm27999 misc_RNA misc_RNA MGP_129S1SvImJ_T0006103.1 MGP_129S1SvImJ_G0005109.1 mouse_genomes_project 10 22078490 22084985 + Gm15137 lincRNA lincRNA MGP_129S1SvImJ_T0012445.1 MGP_129S1SvImJ_G0010534.1 mouse_genomes_project 10 76177315 76177589 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003088.1 MGP_129S1SvImJ_G0002884.1 mouse_genomes_project 10 83917584 83920473 - 1700025N21Rik antisense antisense MGP_129S1SvImJ_T0025115.1 MGP_129S1SvImJ_G0017190.1 mouse_genomes_project 10 41741059 41921984 - MGP_129S1SvImJ_P0025115 Sobp protein_coding protein_coding MGP_129S1SvImJ_T0025116.1 MGP_129S1SvImJ_G0017190.1 mouse_genomes_project 10 41920420 41921975 - MGP_129S1SvImJ_P0025116 Sobp protein_coding protein_coding MGP_129S1SvImJ_T0027601.1 MGP_129S1SvImJ_G0017919.1 mouse_genomes_project 10 133511446 133515112 - MGP_129S1SvImJ_P0027601 Olfr798 protein_coding protein_coding MGP_129S1SvImJ_T0027602.1 MGP_129S1SvImJ_G0017919.1 mouse_genomes_project 10 133511446 133513285 - MGP_129S1SvImJ_P0027602 Olfr798 protein_coding protein_coding MGP_129S1SvImJ_T0026354.1 MGP_129S1SvImJ_G0017525.1 mouse_genomes_project 10 81519395 81532822 + MGP_129S1SvImJ_P0026354 Sppl2b protein_coding protein_coding MGP_129S1SvImJ_T0003073.1 MGP_129S1SvImJ_G0002873.1 mouse_genomes_project 10 80880456 80881019 - Gm15122 antisense antisense MGP_129S1SvImJ_T0099183.1 MGP_129S1SvImJ_G0037250.1 mouse_genomes_project 10 62369095 62369201 - Gm26479 snRNA snRNA MGP_129S1SvImJ_T0025050.1 MGP_129S1SvImJ_G0017176.1 mouse_genomes_project 10 40162301 40173894 + MGP_129S1SvImJ_P0025050 Cd164 protein_coding protein_coding MGP_129S1SvImJ_T0025051.1 MGP_129S1SvImJ_G0017176.1 mouse_genomes_project 10 40162388 40168160 + Cd164 protein_coding retained_intron MGP_129S1SvImJ_T0025052.1 MGP_129S1SvImJ_G0017176.1 mouse_genomes_project 10 40162779 40171892 + MGP_129S1SvImJ_P0025052 Cd164 protein_coding protein_coding MGP_129S1SvImJ_T0025053.1 MGP_129S1SvImJ_G0017176.1 mouse_genomes_project 10 40162931 40169764 + Cd164 protein_coding processed_transcript MGP_129S1SvImJ_T0026989.1 MGP_129S1SvImJ_G0017692.1 mouse_genomes_project 10 102441749 102454704 - MGP_129S1SvImJ_P0026989 4930430F08Rik protein_coding protein_coding MGP_129S1SvImJ_T0025834.1 MGP_129S1SvImJ_G0017383.1 mouse_genomes_project 10 76703355 76712980 - MGP_129S1SvImJ_P0025834 Ybey protein_coding protein_coding MGP_129S1SvImJ_T0025419.1 MGP_129S1SvImJ_G0017294.1 mouse_genomes_project 10 61663559 61680443 + MGP_129S1SvImJ_P0025419 Tacr2 protein_coding protein_coding MGP_129S1SvImJ_T0025096.1 MGP_129S1SvImJ_G0017187.1 mouse_genomes_project 10 41307984 41308894 + Ostm1 protein_coding processed_transcript MGP_129S1SvImJ_T0025097.1 MGP_129S1SvImJ_G0017187.1 mouse_genomes_project 10 41307997 41425388 + MGP_129S1SvImJ_P0025097 Ostm1 protein_coding protein_coding MGP_129S1SvImJ_T0025098.1 MGP_129S1SvImJ_G0017187.1 mouse_genomes_project 10 41308000 41427549 + MGP_129S1SvImJ_P0025098 Ostm1 protein_coding protein_coding MGP_129S1SvImJ_T0025099.1 MGP_129S1SvImJ_G0017187.1 mouse_genomes_project 10 41404796 41429515 + MGP_129S1SvImJ_P0025099 Ostm1 protein_coding protein_coding MGP_129S1SvImJ_T0025100.1 MGP_129S1SvImJ_G0017187.1 mouse_genomes_project 10 41404846 41427048 + Ostm1 protein_coding retained_intron MGP_129S1SvImJ_T0017134.1 MGP_129S1SvImJ_G0015134.1 mouse_genomes_project 10 38140056 38255407 - E130307A14Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017135.1 MGP_129S1SvImJ_G0015134.1 mouse_genomes_project 10 38140058 38255406 - E130307A14Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017136.1 MGP_129S1SvImJ_G0015134.1 mouse_genomes_project 10 38141269 38255216 - E130307A14Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017137.1 MGP_129S1SvImJ_G0015134.1 mouse_genomes_project 10 38141299 38255249 - E130307A14Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017138.1 MGP_129S1SvImJ_G0015134.1 mouse_genomes_project 10 38141342 38255401 - E130307A14Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017139.1 MGP_129S1SvImJ_G0015134.1 mouse_genomes_project 10 38141358 38255214 - E130307A14Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017140.1 MGP_129S1SvImJ_G0015134.1 mouse_genomes_project 10 38141620 38255176 - E130307A14Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017141.1 MGP_129S1SvImJ_G0015134.1 mouse_genomes_project 10 38158130 38165212 - E130307A14Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017142.1 MGP_129S1SvImJ_G0015134.1 mouse_genomes_project 10 38158222 38255382 - E130307A14Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017143.1 MGP_129S1SvImJ_G0015134.1 mouse_genomes_project 10 38173950 38251581 - E130307A14Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017144.1 MGP_129S1SvImJ_G0015134.1 mouse_genomes_project 10 38174518 38255406 - E130307A14Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017145.1 MGP_129S1SvImJ_G0015134.1 mouse_genomes_project 10 38198939 38255406 - E130307A14Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017146.1 MGP_129S1SvImJ_G0015134.1 mouse_genomes_project 10 38244812 38255367 - E130307A14Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0009583.1 MGP_129S1SvImJ_G0007699.1 mouse_genomes_project 10 18039407 18039515 - Mir6413 miRNA miRNA MGP_129S1SvImJ_T0017151.1 MGP_129S1SvImJ_G0015137.1 mouse_genomes_project 10 70123592 70135342 + Mrln processed_transcript lincRNA MGP_129S1SvImJ_T0017152.1 MGP_129S1SvImJ_G0015137.1 mouse_genomes_project 10 70123595 70139768 + Mrln processed_transcript lincRNA MGP_129S1SvImJ_T0017153.1 MGP_129S1SvImJ_G0015137.1 mouse_genomes_project 10 70123638 70139637 + Mrln processed_transcript lincRNA MGP_129S1SvImJ_T0017154.1 MGP_129S1SvImJ_G0015137.1 mouse_genomes_project 10 70123653 70129875 + Mrln processed_transcript lincRNA MGP_129S1SvImJ_T0017155.1 MGP_129S1SvImJ_G0015137.1 mouse_genomes_project 10 70136953 70139767 + Mrln processed_transcript retained_intron MGP_129S1SvImJ_T0027639.1 MGP_129S1SvImJ_G0017945.1 mouse_genomes_project 10 134071130 134073130 - MGP_129S1SvImJ_P0027639 protein_coding protein_coding MGP_129S1SvImJ_T0003030.1 MGP_129S1SvImJ_G0002839.1 mouse_genomes_project 10 12158239 12162279 + Gm16234 antisense antisense MGP_129S1SvImJ_T0027194.1 MGP_129S1SvImJ_G0017766.1 mouse_genomes_project 10 121213226 121220209 + MGP_129S1SvImJ_P0027194 Il22 protein_coding protein_coding MGP_129S1SvImJ_T0100442.1 MGP_129S1SvImJ_G0038509.1 mouse_genomes_project 10 72572903 72573036 + Gm24984 snoRNA snoRNA MGP_129S1SvImJ_T0025531.1 MGP_129S1SvImJ_G0017322.1 mouse_genomes_project 10 66830952 66933315 + Jmjd1c protein_coding retained_intron MGP_129S1SvImJ_T0025532.1 MGP_129S1SvImJ_G0017322.1 mouse_genomes_project 10 66831232 66898683 + Jmjd1c protein_coding retained_intron MGP_129S1SvImJ_T0025533.1 MGP_129S1SvImJ_G0017322.1 mouse_genomes_project 10 66831319 66970836 + MGP_129S1SvImJ_P0025533 Jmjd1c protein_coding protein_coding MGP_129S1SvImJ_T0025534.1 MGP_129S1SvImJ_G0017322.1 mouse_genomes_project 10 66863695 67003353 + MGP_129S1SvImJ_P0025534 Jmjd1c protein_coding protein_coding MGP_129S1SvImJ_T0025535.1 MGP_129S1SvImJ_G0017322.1 mouse_genomes_project 10 66863761 67003352 + MGP_129S1SvImJ_P0025535 Jmjd1c protein_coding protein_coding MGP_129S1SvImJ_T0025536.1 MGP_129S1SvImJ_G0017322.1 mouse_genomes_project 10 66927315 66958917 + Jmjd1c protein_coding retained_intron MGP_129S1SvImJ_T0025537.1 MGP_129S1SvImJ_G0017322.1 mouse_genomes_project 10 66927319 66933317 + Jmjd1c protein_coding retained_intron MGP_129S1SvImJ_T0025538.1 MGP_129S1SvImJ_G0017322.1 mouse_genomes_project 10 66960485 66961102 + Jmjd1c protein_coding retained_intron MGP_129S1SvImJ_T0025539.1 MGP_129S1SvImJ_G0017322.1 mouse_genomes_project 10 66984019 66998508 + MGP_129S1SvImJ_P0025539 Jmjd1c protein_coding protein_coding MGP_129S1SvImJ_T0025540.1 MGP_129S1SvImJ_G0017322.1 mouse_genomes_project 10 66984793 66991290 + Jmjd1c protein_coding retained_intron MGP_129S1SvImJ_T0026879.1 MGP_129S1SvImJ_G0017650.1 mouse_genomes_project 10 94868282 94902766 + MGP_129S1SvImJ_P0026879 Lta4h protein_coding protein_coding MGP_129S1SvImJ_T0026880.1 MGP_129S1SvImJ_G0017650.1 mouse_genomes_project 10 94868396 94901906 + MGP_129S1SvImJ_P0026880 Lta4h protein_coding unknown_likely_coding MGP_129S1SvImJ_T0011304.1 MGP_129S1SvImJ_G0009420.1 mouse_genomes_project 10 96465896 96466200 + Gm25266 misc_RNA misc_RNA MGP_129S1SvImJ_T0009592.1 MGP_129S1SvImJ_G0007708.1 mouse_genomes_project 10 44718110 44718225 - Gm27410 miRNA miRNA MGP_129S1SvImJ_T0012401.1 MGP_129S1SvImJ_G0010490.1 mouse_genomes_project 10 4810586 4811316 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003050.1 MGP_129S1SvImJ_G0002854.1 mouse_genomes_project 10 41920709 41921412 + Gm29246 antisense antisense MGP_129S1SvImJ_T0026411.1 MGP_129S1SvImJ_G0017544.1 mouse_genomes_project 10 81934283 81955503 + MGP_129S1SvImJ_P0026411 Zfr2 protein_coding protein_coding MGP_129S1SvImJ_T0026412.1 MGP_129S1SvImJ_G0017544.1 mouse_genomes_project 10 81934283 81938682 + MGP_129S1SvImJ_P0026412 Zfr2 protein_coding protein_coding MGP_129S1SvImJ_T0026413.1 MGP_129S1SvImJ_G0017544.1 mouse_genomes_project 10 81934304 81938706 + Zfr2 protein_coding processed_transcript MGP_129S1SvImJ_T0026414.1 MGP_129S1SvImJ_G0017544.1 mouse_genomes_project 10 81934304 81945802 + Zfr2 protein_coding retained_intron MGP_129S1SvImJ_T0026415.1 MGP_129S1SvImJ_G0017544.1 mouse_genomes_project 10 81934315 81955501 + Zfr2 protein_coding retained_intron MGP_129S1SvImJ_T0026416.1 MGP_129S1SvImJ_G0017544.1 mouse_genomes_project 10 81951795 81955092 + MGP_129S1SvImJ_P0026416 Zfr2 protein_coding protein_coding MGP_129S1SvImJ_T0026417.1 MGP_129S1SvImJ_G0017544.1 mouse_genomes_project 10 81952430 81953926 + Zfr2 protein_coding retained_intron MGP_129S1SvImJ_T0003032.1 MGP_129S1SvImJ_G0002841.1 mouse_genomes_project 10 15437240 15442064 - Gm20655 antisense antisense MGP_129S1SvImJ_T0003033.1 MGP_129S1SvImJ_G0002841.1 mouse_genomes_project 10 15439824 15446664 - Gm20655 antisense antisense MGP_129S1SvImJ_T0025377.1 MGP_129S1SvImJ_G0017277.1 mouse_genomes_project 10 60616647 60626234 + MGP_129S1SvImJ_P0025377 Prf1 protein_coding protein_coding MGP_129S1SvImJ_T0026222.1 MGP_129S1SvImJ_G0017490.1 mouse_genomes_project 10 80844847 80852520 + MGP_129S1SvImJ_P0026222 Ndufs7 protein_coding protein_coding MGP_129S1SvImJ_T0026223.1 MGP_129S1SvImJ_G0017490.1 mouse_genomes_project 10 80845175 80849140 + Ndufs7 protein_coding retained_intron MGP_129S1SvImJ_T0026224.1 MGP_129S1SvImJ_G0017490.1 mouse_genomes_project 10 80845178 80852519 + MGP_129S1SvImJ_P0026224 Ndufs7 protein_coding protein_coding MGP_129S1SvImJ_T0026225.1 MGP_129S1SvImJ_G0017490.1 mouse_genomes_project 10 80845186 80849668 + Ndufs7 protein_coding retained_intron MGP_129S1SvImJ_T0026226.1 MGP_129S1SvImJ_G0017490.1 mouse_genomes_project 10 80845211 80852521 + Ndufs7 protein_coding processed_transcript MGP_129S1SvImJ_T0026227.1 MGP_129S1SvImJ_G0017490.1 mouse_genomes_project 10 80849041 80850867 + Ndufs7 protein_coding retained_intron MGP_129S1SvImJ_T0025379.1 MGP_129S1SvImJ_G0017279.1 mouse_genomes_project 10 60760071 60769748 + MGP_129S1SvImJ_P0025379 Nodal protein_coding protein_coding MGP_129S1SvImJ_T0098297.1 MGP_129S1SvImJ_G0036382.1 mouse_genomes_project 10 130546640 130568305 + pseudogene pseudogene MGP_129S1SvImJ_T0099209.1 MGP_129S1SvImJ_G0037276.1 mouse_genomes_project 10 113268068 113268174 - Gm22236 snRNA snRNA MGP_129S1SvImJ_T0099207.1 MGP_129S1SvImJ_G0037274.1 mouse_genomes_project 10 107113245 107113411 + Gm25587 snRNA snRNA MGP_129S1SvImJ_T0100443.1 MGP_129S1SvImJ_G0038510.1 mouse_genomes_project 10 78314082 78314158 - Gm22394 snoRNA snoRNA MGP_129S1SvImJ_T0100453.1 MGP_129S1SvImJ_G0038520.1 mouse_genomes_project 10 108034072 108034204 - Gm24237 snoRNA snoRNA MGP_129S1SvImJ_T0025568.1 MGP_129S1SvImJ_G0017333.1 mouse_genomes_project 10 69063269 69069047 - MGP_129S1SvImJ_P0025568 A930033H14Rik protein_coding protein_coding MGP_129S1SvImJ_T0025661.1 MGP_129S1SvImJ_G0017345.1 mouse_genomes_project 10 71342090 71382922 + MGP_129S1SvImJ_P0025661 Ipmk protein_coding protein_coding MGP_129S1SvImJ_T0025662.1 MGP_129S1SvImJ_G0017345.1 mouse_genomes_project 10 71342163 71379037 + MGP_129S1SvImJ_P0025662 Ipmk protein_coding protein_coding MGP_129S1SvImJ_T0025663.1 MGP_129S1SvImJ_G0017345.1 mouse_genomes_project 10 71342163 71379276 + MGP_129S1SvImJ_P0025663 Ipmk protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025664.1 MGP_129S1SvImJ_G0017345.1 mouse_genomes_project 10 71342163 71374457 + MGP_129S1SvImJ_P0025664 Ipmk protein_coding protein_coding MGP_129S1SvImJ_T0025665.1 MGP_129S1SvImJ_G0017345.1 mouse_genomes_project 10 71342170 71359142 + Ipmk protein_coding retained_intron MGP_129S1SvImJ_T0025666.1 MGP_129S1SvImJ_G0017345.1 mouse_genomes_project 10 71378785 71440476 + MGP_129S1SvImJ_P0025666 Ipmk protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025667.1 MGP_129S1SvImJ_G0017345.1 mouse_genomes_project 10 71408563 71440623 + Ipmk protein_coding processed_transcript MGP_129S1SvImJ_T0024633.1 MGP_129S1SvImJ_G0017024.1 mouse_genomes_project 10 10972958 10984529 + MGP_129S1SvImJ_P0024633 Adat2 protein_coding protein_coding MGP_129S1SvImJ_T0024571.1 MGP_129S1SvImJ_G0017012.1 mouse_genomes_project 10 8518887 8557906 + MGP_129S1SvImJ_P0024571 Shprh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024572.1 MGP_129S1SvImJ_G0017012.1 mouse_genomes_project 10 8518890 8589368 + MGP_129S1SvImJ_P0024572 Shprh protein_coding protein_coding MGP_129S1SvImJ_T0024573.1 MGP_129S1SvImJ_G0017012.1 mouse_genomes_project 10 8518933 8523987 + Shprh protein_coding retained_intron MGP_129S1SvImJ_T0024574.1 MGP_129S1SvImJ_G0017012.1 mouse_genomes_project 10 8518984 8580494 + MGP_129S1SvImJ_P0024574 Shprh protein_coding protein_coding MGP_129S1SvImJ_T0024575.1 MGP_129S1SvImJ_G0017012.1 mouse_genomes_project 10 8518984 8580494 + MGP_129S1SvImJ_P0024575 Shprh protein_coding protein_coding MGP_129S1SvImJ_T0024576.1 MGP_129S1SvImJ_G0017012.1 mouse_genomes_project 10 8533831 8539623 + MGP_129S1SvImJ_P0024576 Shprh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024577.1 MGP_129S1SvImJ_G0017012.1 mouse_genomes_project 10 8535943 8586013 + Shprh protein_coding retained_intron MGP_129S1SvImJ_T0024578.1 MGP_129S1SvImJ_G0017012.1 mouse_genomes_project 10 8575878 8580553 + Shprh protein_coding retained_intron MGP_129S1SvImJ_T0025335.1 MGP_129S1SvImJ_G0017269.1 mouse_genomes_project 10 59573285 59598994 + MGP_129S1SvImJ_P0025335 Vsir protein_coding protein_coding MGP_129S1SvImJ_T0025336.1 MGP_129S1SvImJ_G0017269.1 mouse_genomes_project 10 59573339 59584635 + Vsir protein_coding processed_transcript MGP_129S1SvImJ_T0025337.1 MGP_129S1SvImJ_G0017269.1 mouse_genomes_project 10 59573341 59584417 + Vsir protein_coding processed_transcript MGP_129S1SvImJ_T0025338.1 MGP_129S1SvImJ_G0017269.1 mouse_genomes_project 10 59573418 59585349 + Vsir protein_coding retained_intron MGP_129S1SvImJ_T0025339.1 MGP_129S1SvImJ_G0017269.1 mouse_genomes_project 10 59573446 59594078 + MGP_129S1SvImJ_P0025339 Vsir protein_coding protein_coding MGP_129S1SvImJ_T0025340.1 MGP_129S1SvImJ_G0017269.1 mouse_genomes_project 10 59573456 59598978 + MGP_129S1SvImJ_P0025340 Vsir protein_coding protein_coding MGP_129S1SvImJ_T0026367.1 MGP_129S1SvImJ_G0017531.1 mouse_genomes_project 10 81695904 81701738 - MGP_129S1SvImJ_P0026367 Diras1 protein_coding protein_coding MGP_129S1SvImJ_T0026368.1 MGP_129S1SvImJ_G0017531.1 mouse_genomes_project 10 81698406 81701991 - MGP_129S1SvImJ_P0026368 Diras1 protein_coding protein_coding MGP_129S1SvImJ_T0102120.1 MGP_129S1SvImJ_G0039955.1 mouse_genomes_project 10 133463624 133464387 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0027336.1 MGP_129S1SvImJ_G0017813.1 mouse_genomes_project 10 130811876 130850924 - MGP_129S1SvImJ_P0027336 Kif5a protein_coding protein_coding MGP_129S1SvImJ_T0011295.1 MGP_129S1SvImJ_G0009411.1 mouse_genomes_project 10 78809536 78809844 - Gm22514 misc_RNA misc_RNA MGP_129S1SvImJ_T0024391.1 MGP_129S1SvImJ_G0016970.1 mouse_genomes_project 10 13354 22882 + MGP_129S1SvImJ_P0024391 9230019H11Rik protein_coding protein_coding MGP_129S1SvImJ_T0009639.1 MGP_129S1SvImJ_G0007755.1 mouse_genomes_project 10 119312932 119313027 - Gm25190 miRNA miRNA MGP_129S1SvImJ_T0100426.1 MGP_129S1SvImJ_G0038493.1 mouse_genomes_project 10 38649817 38649946 + Gm25613 snoRNA snoRNA MGP_129S1SvImJ_T0100431.1 MGP_129S1SvImJ_G0038498.1 mouse_genomes_project 10 45585352 45585483 - Gm23481 snoRNA snoRNA MGP_129S1SvImJ_T0024647.1 MGP_129S1SvImJ_G0017027.1 mouse_genomes_project 10 11888931 12042176 - MGP_129S1SvImJ_P0024647 Adgrg6 protein_coding protein_coding MGP_129S1SvImJ_T0024648.1 MGP_129S1SvImJ_G0017027.1 mouse_genomes_project 10 11892421 12042153 - MGP_129S1SvImJ_P0024648 Adgrg6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0024628.1 MGP_129S1SvImJ_G0017023.1 mouse_genomes_project 10 10938430 10973207 - MGP_129S1SvImJ_P0024628 Pex3 protein_coding protein_coding MGP_129S1SvImJ_T0024629.1 MGP_129S1SvImJ_G0017023.1 mouse_genomes_project 10 10939473 10972963 - MGP_129S1SvImJ_P0024629 Pex3 protein_coding protein_coding MGP_129S1SvImJ_T0024630.1 MGP_129S1SvImJ_G0017023.1 mouse_genomes_project 10 10943554 10950549 - Pex3 protein_coding retained_intron MGP_129S1SvImJ_T0024631.1 MGP_129S1SvImJ_G0017023.1 mouse_genomes_project 10 10945853 10972929 - Pex3 protein_coding processed_transcript MGP_129S1SvImJ_T0024632.1 MGP_129S1SvImJ_G0017023.1 mouse_genomes_project 10 10950314 10972884 - Pex3 protein_coding processed_transcript MGP_129S1SvImJ_T0025280.1 MGP_129S1SvImJ_G0017258.1 mouse_genomes_project 10 58615470 58793186 - MGP_129S1SvImJ_P0025280 Mcu protein_coding protein_coding MGP_129S1SvImJ_T0025281.1 MGP_129S1SvImJ_G0017258.1 mouse_genomes_project 10 58618469 58628073 - MGP_129S1SvImJ_P0025281 Mcu protein_coding protein_coding MGP_129S1SvImJ_T0025282.1 MGP_129S1SvImJ_G0017258.1 mouse_genomes_project 10 58706854 58793169 - MGP_129S1SvImJ_P0025282 Mcu protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025283.1 MGP_129S1SvImJ_G0017258.1 mouse_genomes_project 10 58778688 58793173 - Mcu protein_coding processed_transcript MGP_129S1SvImJ_T0025284.1 MGP_129S1SvImJ_G0017258.1 mouse_genomes_project 10 58779452 58793149 - Mcu protein_coding processed_transcript MGP_129S1SvImJ_T0003076.1 MGP_129S1SvImJ_G0002876.1 mouse_genomes_project 10 81416245 81420498 - antisense antisense MGP_129S1SvImJ_T0009598.1 MGP_129S1SvImJ_G0007714.1 mouse_genomes_project 10 60245114 60245236 + Mir466j miRNA miRNA MGP_129S1SvImJ_T0024793.1 MGP_129S1SvImJ_G0017074.1 mouse_genomes_project 10 21779549 21797946 + MGP_129S1SvImJ_P0024793 Vnn3 protein_coding protein_coding MGP_129S1SvImJ_T0101604.1 MGP_129S1SvImJ_G0039654.1 mouse_genomes_project 10 89854607 89856168 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101605.1 MGP_129S1SvImJ_G0039654.1 mouse_genomes_project 10 89855386 89855783 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0003061.1 MGP_129S1SvImJ_G0002863.1 mouse_genomes_project 10 67817413 67818274 - Gm16212 antisense antisense MGP_129S1SvImJ_T0003062.1 MGP_129S1SvImJ_G0002863.1 mouse_genomes_project 10 67817986 67818597 - Gm16212 antisense antisense MGP_129S1SvImJ_T0024783.1 MGP_129S1SvImJ_G0017070.1 mouse_genomes_project 10 20739086 20741929 - MGP_129S1SvImJ_P0024783 Tcf21 protein_coding protein_coding MGP_129S1SvImJ_T0027084.1 MGP_129S1SvImJ_G0017724.1 mouse_genomes_project 10 114453371 114465172 - MGP_129S1SvImJ_P0027084 Glipr1 protein_coding protein_coding MGP_129S1SvImJ_T0027085.1 MGP_129S1SvImJ_G0017724.1 mouse_genomes_project 10 114453378 114472255 - MGP_129S1SvImJ_P0027085 Glipr1 protein_coding protein_coding MGP_129S1SvImJ_T0027086.1 MGP_129S1SvImJ_G0017724.1 mouse_genomes_project 10 114453383 114461406 - MGP_129S1SvImJ_P0027086 Glipr1 protein_coding protein_coding MGP_129S1SvImJ_T0027087.1 MGP_129S1SvImJ_G0017724.1 mouse_genomes_project 10 114461378 114472265 - Glipr1 protein_coding processed_transcript MGP_129S1SvImJ_T0027088.1 MGP_129S1SvImJ_G0017724.1 mouse_genomes_project 10 114461478 114463733 - Glipr1 protein_coding processed_transcript MGP_129S1SvImJ_T0000837.1 MGP_129S1SvImJ_G0000771.1 mouse_genomes_project 10 16621493 16621783 - TEC TEC MGP_129S1SvImJ_T0027094.1 MGP_129S1SvImJ_G0017729.1 mouse_genomes_project 10 115476399 115479961 - MGP_129S1SvImJ_P0027094 Atxn7l3b protein_coding protein_coding MGP_129S1SvImJ_T0027095.1 MGP_129S1SvImJ_G0017729.1 mouse_genomes_project 10 115478754 115479967 - Atxn7l3b protein_coding processed_transcript MGP_129S1SvImJ_T0026398.1 MGP_129S1SvImJ_G0017538.1 mouse_genomes_project 10 81846804 81861457 - MGP_129S1SvImJ_P0026398 Pias4 protein_coding protein_coding MGP_129S1SvImJ_T0026399.1 MGP_129S1SvImJ_G0017538.1 mouse_genomes_project 10 81847773 81849663 - Pias4 protein_coding retained_intron MGP_129S1SvImJ_T0026400.1 MGP_129S1SvImJ_G0017538.1 mouse_genomes_project 10 81849040 81851550 - Pias4 protein_coding retained_intron MGP_129S1SvImJ_T0026401.1 MGP_129S1SvImJ_G0017538.1 mouse_genomes_project 10 81849210 81861255 - MGP_129S1SvImJ_P0026401 Pias4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026402.1 MGP_129S1SvImJ_G0017538.1 mouse_genomes_project 10 81849397 81850798 - MGP_129S1SvImJ_P0026402 Pias4 protein_coding protein_coding MGP_129S1SvImJ_T0026403.1 MGP_129S1SvImJ_G0017538.1 mouse_genomes_project 10 81856573 81861248 - Pias4 protein_coding retained_intron MGP_129S1SvImJ_T0026604.1 MGP_129S1SvImJ_G0017582.1 mouse_genomes_project 10 83720874 83721531 + MGP_129S1SvImJ_P0026604 Gm4799 protein_coding protein_coding MGP_129S1SvImJ_T0025470.1 MGP_129S1SvImJ_G0017305.1 mouse_genomes_project 10 62202732 62254208 - MGP_129S1SvImJ_P0025470 Ccar1 protein_coding protein_coding MGP_129S1SvImJ_T0102116.1 MGP_129S1SvImJ_G0039951.1 mouse_genomes_project 10 132843315 132844245 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0027553.1 MGP_129S1SvImJ_G0017889.1 mouse_genomes_project 10 132714600 132720287 - MGP_129S1SvImJ_P0027553 Rdh5 protein_coding protein_coding MGP_129S1SvImJ_T0027554.1 MGP_129S1SvImJ_G0017889.1 mouse_genomes_project 10 132714824 132719042 - MGP_129S1SvImJ_P0027554 Rdh5 protein_coding protein_coding MGP_129S1SvImJ_T0027555.1 MGP_129S1SvImJ_G0017889.1 mouse_genomes_project 10 132714853 132715631 - Rdh5 protein_coding retained_intron MGP_129S1SvImJ_T0027556.1 MGP_129S1SvImJ_G0017889.1 mouse_genomes_project 10 132715232 132720262 - MGP_129S1SvImJ_P0027556 Rdh5 protein_coding protein_coding MGP_129S1SvImJ_T0027557.1 MGP_129S1SvImJ_G0017889.1 mouse_genomes_project 10 132718290 132720287 - Rdh5 protein_coding retained_intron MGP_129S1SvImJ_T0027559.1 MGP_129S1SvImJ_G0017889.1 mouse_genomes_project 10 132718913 132719695 - MGP_129S1SvImJ_P0027559 Rdh5 protein_coding protein_coding MGP_129S1SvImJ_T0027560.1 MGP_129S1SvImJ_G0017889.1 mouse_genomes_project 10 132719409 132723878 - MGP_129S1SvImJ_P0027560 Rdh5 protein_coding protein_coding MGP_129S1SvImJ_T0027425.1 MGP_129S1SvImJ_G0017841.1 mouse_genomes_project 10 131536042 131540632 - MGP_129S1SvImJ_P0027425 Rdh7 protein_coding protein_coding MGP_129S1SvImJ_T0027426.1 MGP_129S1SvImJ_G0017841.1 mouse_genomes_project 10 131539288 131540145 - Rdh7 protein_coding processed_transcript MGP_129S1SvImJ_T0027310.1 MGP_129S1SvImJ_G0017804.1 mouse_genomes_project 10 130639525 130644674 + MGP_129S1SvImJ_P0027310 Cdk4 protein_coding protein_coding MGP_129S1SvImJ_T0027311.1 MGP_129S1SvImJ_G0017804.1 mouse_genomes_project 10 130639594 130642994 + MGP_129S1SvImJ_P0027311 Cdk4 protein_coding protein_coding MGP_129S1SvImJ_T0027312.1 MGP_129S1SvImJ_G0017804.1 mouse_genomes_project 10 130639595 130642169 + MGP_129S1SvImJ_P0027312 Cdk4 protein_coding protein_coding MGP_129S1SvImJ_T0027313.1 MGP_129S1SvImJ_G0017804.1 mouse_genomes_project 10 130639600 130642994 + MGP_129S1SvImJ_P0027313 Cdk4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027314.1 MGP_129S1SvImJ_G0017804.1 mouse_genomes_project 10 130639605 130643286 + Cdk4 protein_coding retained_intron MGP_129S1SvImJ_T0027315.1 MGP_129S1SvImJ_G0017804.1 mouse_genomes_project 10 130639607 130641272 + Cdk4 protein_coding retained_intron MGP_129S1SvImJ_T0027316.1 MGP_129S1SvImJ_G0017804.1 mouse_genomes_project 10 130639859 130642223 + MGP_129S1SvImJ_P0027316 Cdk4 protein_coding protein_coding MGP_129S1SvImJ_T0027317.1 MGP_129S1SvImJ_G0017804.1 mouse_genomes_project 10 130640289 130641307 + Cdk4 protein_coding retained_intron MGP_129S1SvImJ_T0027318.1 MGP_129S1SvImJ_G0017804.1 mouse_genomes_project 10 130642067 130643224 + Cdk4 protein_coding retained_intron MGP_129S1SvImJ_T0026963.1 MGP_129S1SvImJ_G0017678.1 mouse_genomes_project 10 99386101 99426124 + MGP_129S1SvImJ_P0026963 Epyc protein_coding protein_coding MGP_129S1SvImJ_T0026964.1 MGP_129S1SvImJ_G0017678.1 mouse_genomes_project 10 99389122 99426678 + MGP_129S1SvImJ_P0026964 Epyc protein_coding protein_coding MGP_129S1SvImJ_T0003060.1 MGP_129S1SvImJ_G0002862.1 mouse_genomes_project 10 62754405 62755491 - 1700120B22Rik antisense antisense MGP_129S1SvImJ_T0026709.1 MGP_129S1SvImJ_G0017617.1 mouse_genomes_project 10 88051512 88226674 + MGP_129S1SvImJ_P0026709 1700113H08Rik protein_coding protein_coding MGP_129S1SvImJ_T0026710.1 MGP_129S1SvImJ_G0017617.1 mouse_genomes_project 10 88051513 88226673 + MGP_129S1SvImJ_P0026710 1700113H08Rik protein_coding protein_coding MGP_129S1SvImJ_T0026711.1 MGP_129S1SvImJ_G0017617.1 mouse_genomes_project 10 88202057 88226672 + MGP_129S1SvImJ_P0026711 1700113H08Rik protein_coding protein_coding MGP_129S1SvImJ_T0000846.1 MGP_129S1SvImJ_G0000780.1 mouse_genomes_project 10 81126695 81127550 + TEC TEC MGP_129S1SvImJ_T0026566.1 MGP_129S1SvImJ_G0017571.1 mouse_genomes_project 10 82702718 82719874 + MGP_129S1SvImJ_P0026566 Zfp873 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0026567.1 MGP_129S1SvImJ_G0017571.1 mouse_genomes_project 10 82712908 82715831 + MGP_129S1SvImJ_P0026567 Zfp873 protein_coding protein_coding MGP_129S1SvImJ_T0025027.1 MGP_129S1SvImJ_G0017172.1 mouse_genomes_project 10 40090687 40107487 + MGP_129S1SvImJ_P0025027 Zbtb24 protein_coding protein_coding MGP_129S1SvImJ_T0009645.1 MGP_129S1SvImJ_G0007761.1 mouse_genomes_project 10 126550966 126551062 - Gm27920 miRNA miRNA MGP_129S1SvImJ_T0024773.1 MGP_129S1SvImJ_G0017065.1 mouse_genomes_project 10 19863111 19868183 - MGP_129S1SvImJ_P0024773 protein_coding protein_coding MGP_129S1SvImJ_T0026258.1 MGP_129S1SvImJ_G0017498.1 mouse_genomes_project 10 80940569 80941545 - Adamtsl5 protein_coding processed_transcript MGP_129S1SvImJ_T0026259.1 MGP_129S1SvImJ_G0017498.1 mouse_genomes_project 10 80941252 80950725 - Adamtsl5 protein_coding retained_intron MGP_129S1SvImJ_T0026260.1 MGP_129S1SvImJ_G0017498.1 mouse_genomes_project 10 80941280 80948432 - Adamtsl5 protein_coding retained_intron MGP_129S1SvImJ_T0026261.1 MGP_129S1SvImJ_G0017498.1 mouse_genomes_project 10 80942300 80950725 - Adamtsl5 protein_coding retained_intron MGP_129S1SvImJ_T0026262.1 MGP_129S1SvImJ_G0017498.1 mouse_genomes_project 10 80942300 80950725 - MGP_129S1SvImJ_P0026262 Adamtsl5 protein_coding protein_coding MGP_129S1SvImJ_T0026263.1 MGP_129S1SvImJ_G0017498.1 mouse_genomes_project 10 80942614 80950727 - MGP_129S1SvImJ_P0026263 Adamtsl5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0026264.1 MGP_129S1SvImJ_G0017498.1 mouse_genomes_project 10 80944198 80950725 - MGP_129S1SvImJ_P0026264 Adamtsl5 protein_coding protein_coding MGP_129S1SvImJ_T0026265.1 MGP_129S1SvImJ_G0017498.1 mouse_genomes_project 10 80944465 80947551 - Adamtsl5 protein_coding processed_transcript MGP_129S1SvImJ_T0027548.1 MGP_129S1SvImJ_G0017886.1 mouse_genomes_project 10 132616073 132677377 + MGP_129S1SvImJ_P0027548 Sarnp protein_coding protein_coding MGP_129S1SvImJ_T0026944.1 MGP_129S1SvImJ_G0017667.1 mouse_genomes_project 10 96709193 96865339 - MGP_129S1SvImJ_P0026944 Cradd protein_coding protein_coding MGP_129S1SvImJ_T0026966.1 MGP_129S1SvImJ_G0017680.1 mouse_genomes_project 10 99440028 99441896 + MGP_129S1SvImJ_P0026966 Ccer1 protein_coding protein_coding MGP_129S1SvImJ_T0100448.1 MGP_129S1SvImJ_G0038515.1 mouse_genomes_project 10 95359408 95359576 - Gm25962 snoRNA snoRNA MGP_129S1SvImJ_T0027633.1 MGP_129S1SvImJ_G0017940.1 mouse_genomes_project 10 133896736 133897809 - MGP_129S1SvImJ_P0027633 Olfr819 protein_coding protein_coding MGP_129S1SvImJ_T0009584.1 MGP_129S1SvImJ_G0007700.1 mouse_genomes_project 10 20659464 20659525 - Mir7663 miRNA miRNA MGP_129S1SvImJ_T0027071.1 MGP_129S1SvImJ_G0017717.1 mouse_genomes_project 10 113284718 113305593 + MGP_129S1SvImJ_P0027071 Csrp2 protein_coding protein_coding MGP_129S1SvImJ_T0024882.1 MGP_129S1SvImJ_G0017112.1 mouse_genomes_project 10 27490058 27524033 + MGP_129S1SvImJ_P0024882 Echdc1 protein_coding protein_coding MGP_129S1SvImJ_T0024883.1 MGP_129S1SvImJ_G0017112.1 mouse_genomes_project 10 27490173 27522817 + MGP_129S1SvImJ_P0024883 Echdc1 protein_coding protein_coding MGP_129S1SvImJ_T0024884.1 MGP_129S1SvImJ_G0017112.1 mouse_genomes_project 10 27490392 27525113 + MGP_129S1SvImJ_P0024884 Echdc1 protein_coding protein_coding MGP_129S1SvImJ_T0024885.1 MGP_129S1SvImJ_G0017112.1 mouse_genomes_project 10 27490555 27510829 + Echdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0027022.1 MGP_129S1SvImJ_G0017701.1 mouse_genomes_project 10 106224617 106225919 + MGP_129S1SvImJ_P0027022 protein_coding protein_coding MGP_129S1SvImJ_T0100421.1 MGP_129S1SvImJ_G0038488.1 mouse_genomes_project 10 27573466 27573594 + Gm24286 snoRNA snoRNA MGP_129S1SvImJ_T0024634.1 MGP_129S1SvImJ_G0017025.1 mouse_genomes_project 10 11066209 11313653 - MGP_129S1SvImJ_P0024634 Aig1 protein_coding protein_coding MGP_129S1SvImJ_T0024635.1 MGP_129S1SvImJ_G0017025.1 mouse_genomes_project 10 11066824 11313495 - MGP_129S1SvImJ_P0024635 Aig1 protein_coding protein_coding MGP_129S1SvImJ_T0024636.1 MGP_129S1SvImJ_G0017025.1 mouse_genomes_project 10 11075612 11313630 - MGP_129S1SvImJ_P0024636 Aig1 protein_coding protein_coding MGP_129S1SvImJ_T0024637.1 MGP_129S1SvImJ_G0017025.1 mouse_genomes_project 10 11076749 11286090 - Aig1 protein_coding processed_transcript MGP_129S1SvImJ_T0024638.1 MGP_129S1SvImJ_G0017025.1 mouse_genomes_project 10 11235271 11304098 - Aig1 protein_coding retained_intron MGP_129S1SvImJ_T0024639.1 MGP_129S1SvImJ_G0017025.1 mouse_genomes_project 10 11266109 11313649 - Aig1 protein_coding retained_intron MGP_129S1SvImJ_T0024640.1 MGP_129S1SvImJ_G0017025.1 mouse_genomes_project 10 11268907 11313502 - Aig1 protein_coding processed_transcript MGP_129S1SvImJ_T0009625.1 MGP_129S1SvImJ_G0007741.1 mouse_genomes_project 10 93404446 93404546 - Mir135a-2 miRNA miRNA MGP_129S1SvImJ_T0003026.1 MGP_129S1SvImJ_G0002836.1 mouse_genomes_project 10 5006398 5007507 + B430219N15Rik antisense antisense MGP_129S1SvImJ_T0003027.1 MGP_129S1SvImJ_G0002836.1 mouse_genomes_project 10 5006485 5007575 + B430219N15Rik antisense antisense MGP_129S1SvImJ_T0024795.1 MGP_129S1SvImJ_G0017076.1 mouse_genomes_project 10 21851356 21852470 + MGP_129S1SvImJ_P0024795 Taar1 protein_coding protein_coding MGP_129S1SvImJ_T0026228.1 MGP_129S1SvImJ_G0017491.1 mouse_genomes_project 10 80855450 80858312 - MGP_129S1SvImJ_P0026228 Gamt protein_coding protein_coding MGP_129S1SvImJ_T0026229.1 MGP_129S1SvImJ_G0017491.1 mouse_genomes_project 10 80855463 80858268 - MGP_129S1SvImJ_P0026229 Gamt protein_coding protein_coding MGP_129S1SvImJ_T0026230.1 MGP_129S1SvImJ_G0017491.1 mouse_genomes_project 10 80855876 80858218 - Gamt protein_coding retained_intron MGP_129S1SvImJ_T0026231.1 MGP_129S1SvImJ_G0017491.1 mouse_genomes_project 10 80856092 80856589 - Gamt protein_coding retained_intron MGP_129S1SvImJ_T0024393.1 MGP_129S1SvImJ_G0016972.1 mouse_genomes_project 10 279741 388069 + MGP_129S1SvImJ_P0024393 Ppp1r14c protein_coding protein_coding MGP_129S1SvImJ_T0027506.1 MGP_129S1SvImJ_G0017865.1 mouse_genomes_project 10 132145292 132178326 + MGP_129S1SvImJ_P0027506 Rnf41 protein_coding protein_coding MGP_129S1SvImJ_T0027507.1 MGP_129S1SvImJ_G0017865.1 mouse_genomes_project 10 132145292 132178326 + MGP_129S1SvImJ_P0027507 Rnf41 protein_coding protein_coding MGP_129S1SvImJ_T0012441.1 MGP_129S1SvImJ_G0010530.1 mouse_genomes_project 10 73786523 73787072 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100456.1 MGP_129S1SvImJ_G0038523.1 mouse_genomes_project 10 110610917 110611051 + Gm23105 snoRNA snoRNA MGP_129S1SvImJ_T0027418.1 MGP_129S1SvImJ_G0017837.1 mouse_genomes_project 10 131411872 131418740 + MGP_129S1SvImJ_P0027418 protein_coding protein_coding MGP_129S1SvImJ_T0027419.1 MGP_129S1SvImJ_G0017837.1 mouse_genomes_project 10 131411882 131448952 + MGP_129S1SvImJ_P0027419 protein_coding protein_coding MGP_129S1SvImJ_T0100469.1 MGP_129S1SvImJ_G0038536.1 mouse_genomes_project 10 133587194 133587318 + Gm24717 snoRNA snoRNA MGP_129S1SvImJ_T0027301.1 MGP_129S1SvImJ_G0017800.1 mouse_genomes_project 10 130605510 130617571 - MGP_129S1SvImJ_P0027301 Mettl21b protein_coding protein_coding MGP_129S1SvImJ_T0006108.1 MGP_129S1SvImJ_G0005114.1 mouse_genomes_project 10 38430353 38442126 + 4930547M16Rik lincRNA lincRNA MGP_129S1SvImJ_T0025143.1 MGP_129S1SvImJ_G0017205.1 mouse_genomes_project 10 43293341 43314934 - MGP_129S1SvImJ_P0025143 Prdm1 protein_coding protein_coding MGP_129S1SvImJ_T0025144.1 MGP_129S1SvImJ_G0017205.1 mouse_genomes_project 10 43294364 43313396 - MGP_129S1SvImJ_P0025144 Prdm1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0025145.1 MGP_129S1SvImJ_G0017205.1 mouse_genomes_project 10 43294457 43314873 - MGP_129S1SvImJ_P0025145 Prdm1 protein_coding protein_coding MGP_129S1SvImJ_T0025146.1 MGP_129S1SvImJ_G0017205.1 mouse_genomes_project 10 43302897 43388616 - Prdm1 protein_coding processed_transcript MGP_129S1SvImJ_T0025657.1 MGP_129S1SvImJ_G0017343.1 mouse_genomes_project 10 71241361 71271683 - MGP_129S1SvImJ_P0025657 Ube2d1 protein_coding protein_coding MGP_129S1SvImJ_T0025658.1 MGP_129S1SvImJ_G0017343.1 mouse_genomes_project 10 71242040 71244323 - Ube2d1 protein_coding retained_intron MGP_129S1SvImJ_T0025659.1 MGP_129S1SvImJ_G0017343.1 mouse_genomes_project 10 71245139 71271639 - Ube2d1 protein_coding retained_intron MGP_129S1SvImJ_T0027197.1 MGP_129S1SvImJ_G0017769.1 mouse_genomes_project 10 122258611 122300191 - MGP_129S1SvImJ_P0027197 Cand1 protein_coding protein_coding MGP_129S1SvImJ_T0027198.1 MGP_129S1SvImJ_G0017769.1 mouse_genomes_project 10 122265679 122267566 - Cand1 protein_coding retained_intron MGP_129S1SvImJ_T0027199.1 MGP_129S1SvImJ_G0017769.1 mouse_genomes_project 10 122271135 122271966 - Cand1 protein_coding retained_intron MGP_129S1SvImJ_T0027200.1 MGP_129S1SvImJ_G0017769.1 mouse_genomes_project 10 122275834 122299439 - MGP_129S1SvImJ_P0027200 Cand1 protein_coding protein_coding MGP_129S1SvImJ_T0012409.1 MGP_129S1SvImJ_G0010498.1 mouse_genomes_project 10 19085130 19086140 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0025790.1 MGP_129S1SvImJ_G0017366.1 mouse_genomes_project 10 76006707 76014235 - MGP_129S1SvImJ_P0025790 Gstt4 protein_coding protein_coding MGP_129S1SvImJ_T0025791.1 MGP_129S1SvImJ_G0017366.1 mouse_genomes_project 10 76006708 76014219 - MGP_129S1SvImJ_P0025791 Gstt4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025995.1 MGP_129S1SvImJ_G0017424.1 mouse_genomes_project 10 78941451 78944724 - MGP_129S1SvImJ_P0025995 Gm9978 protein_coding protein_coding MGP_129S1SvImJ_T0027041.1 MGP_129S1SvImJ_G0017707.1 mouse_genomes_project 10 109450393 109606717 + MGP_129S1SvImJ_P0027041 Lin7a protein_coding protein_coding MGP_129S1SvImJ_T0027042.1 MGP_129S1SvImJ_G0017707.1 mouse_genomes_project 10 109450393 109606717 + MGP_129S1SvImJ_P0027042 Lin7a protein_coding protein_coding MGP_129S1SvImJ_T0003126.1 MGP_129S1SvImJ_G0002911.1 mouse_genomes_project 10 132125546 132129273 - Gm17201 antisense antisense MGP_129S1SvImJ_T0027255.1 MGP_129S1SvImJ_G0017786.1 mouse_genomes_project 10 125032474 125048001 + MGP_129S1SvImJ_P0027255 BC048403 protein_coding protein_coding MGP_129S1SvImJ_T0027256.1 MGP_129S1SvImJ_G0017786.1 mouse_genomes_project 10 125032475 125048014 + MGP_129S1SvImJ_P0027256 BC048403 protein_coding protein_coding MGP_129S1SvImJ_T0027257.1 MGP_129S1SvImJ_G0017786.1 mouse_genomes_project 10 125044741 125046243 + BC048403 protein_coding processed_transcript MGP_129S1SvImJ_T0012453.1 MGP_129S1SvImJ_G0010542.1 mouse_genomes_project 10 104442498 104443443 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0026072.1 MGP_129S1SvImJ_G0017457.1 mouse_genomes_project 10 80297193 80299036 + MGP_129S1SvImJ_P0026072 Fgf22 protein_coding protein_coding MGP_129S1SvImJ_T0025444.1 MGP_129S1SvImJ_G0017297.1 mouse_genomes_project 10 61859644 61880168 - MGP_129S1SvImJ_P0025444 Supv3l1 protein_coding protein_coding MGP_129S1SvImJ_T0025445.1 MGP_129S1SvImJ_G0017297.1 mouse_genomes_project 10 61859690 61880113 - MGP_129S1SvImJ_P0025445 Supv3l1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025446.1 MGP_129S1SvImJ_G0017297.1 mouse_genomes_project 10 61859775 61861057 - Supv3l1 protein_coding retained_intron MGP_129S1SvImJ_T0025447.1 MGP_129S1SvImJ_G0017297.1 mouse_genomes_project 10 61859878 61861404 - Supv3l1 protein_coding retained_intron MGP_129S1SvImJ_T0025448.1 MGP_129S1SvImJ_G0017297.1 mouse_genomes_project 10 61862794 61863563 - Supv3l1 protein_coding processed_transcript MGP_129S1SvImJ_T0026671.1 MGP_129S1SvImJ_G0017605.1 mouse_genomes_project 10 86878885 86900655 - MGP_129S1SvImJ_P0026671 Rtcb protein_coding protein_coding MGP_129S1SvImJ_T0026672.1 MGP_129S1SvImJ_G0017605.1 mouse_genomes_project 10 86892051 86898971 - Rtcb protein_coding retained_intron MGP_129S1SvImJ_T0026007.1 MGP_129S1SvImJ_G0017433.1 mouse_genomes_project 10 79385215 79390074 + MGP_129S1SvImJ_P0026007 Olfr8 protein_coding protein_coding MGP_129S1SvImJ_T0017131.1 MGP_129S1SvImJ_G0015133.1 mouse_genomes_project 10 35571143 35575117 + 5930403N24Rik processed_transcript retained_intron MGP_129S1SvImJ_T0017132.1 MGP_129S1SvImJ_G0015133.1 mouse_genomes_project 10 35571299 35573430 + 5930403N24Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017133.1 MGP_129S1SvImJ_G0015133.1 mouse_genomes_project 10 35571655 35583049 + 5930403N24Rik processed_transcript lincRNA MGP_129S1SvImJ_T0006170.1 MGP_129S1SvImJ_G0005154.1 mouse_genomes_project 10 113927990 113929078 - Gm28592 lincRNA lincRNA MGP_129S1SvImJ_T0027593.1 MGP_129S1SvImJ_G0017913.1 mouse_genomes_project 10 133376612 133377682 + MGP_129S1SvImJ_P0027593 Olfr790 protein_coding protein_coding MGP_129S1SvImJ_T0025228.1 MGP_129S1SvImJ_G0017240.1 mouse_genomes_project 10 57007610 57120239 + MGP_129S1SvImJ_P0025228 Pkib protein_coding protein_coding MGP_129S1SvImJ_T0025229.1 MGP_129S1SvImJ_G0017240.1 mouse_genomes_project 10 57007680 57123467 + MGP_129S1SvImJ_P0025229 Pkib protein_coding protein_coding MGP_129S1SvImJ_T0025230.1 MGP_129S1SvImJ_G0017240.1 mouse_genomes_project 10 57007685 57085479 + Pkib protein_coding retained_intron MGP_129S1SvImJ_T0025231.1 MGP_129S1SvImJ_G0017240.1 mouse_genomes_project 10 57007723 57036219 + Pkib protein_coding retained_intron MGP_129S1SvImJ_T0025232.1 MGP_129S1SvImJ_G0017240.1 mouse_genomes_project 10 57007753 57109540 + MGP_129S1SvImJ_P0025232 Pkib protein_coding protein_coding MGP_129S1SvImJ_T0025233.1 MGP_129S1SvImJ_G0017240.1 mouse_genomes_project 10 57016585 57092670 + Pkib protein_coding processed_transcript MGP_129S1SvImJ_T0025234.1 MGP_129S1SvImJ_G0017240.1 mouse_genomes_project 10 57022629 57117760 + MGP_129S1SvImJ_P0025234 Pkib protein_coding protein_coding MGP_129S1SvImJ_T0025235.1 MGP_129S1SvImJ_G0017240.1 mouse_genomes_project 10 57022680 57117760 + MGP_129S1SvImJ_P0025235 Pkib protein_coding protein_coding MGP_129S1SvImJ_T0025236.1 MGP_129S1SvImJ_G0017240.1 mouse_genomes_project 10 57029494 57118475 + MGP_129S1SvImJ_P0025236 Pkib protein_coding protein_coding MGP_129S1SvImJ_T0025237.1 MGP_129S1SvImJ_G0017240.1 mouse_genomes_project 10 57029507 57117761 + MGP_129S1SvImJ_P0025237 Pkib protein_coding protein_coding MGP_129S1SvImJ_T0025238.1 MGP_129S1SvImJ_G0017240.1 mouse_genomes_project 10 57109370 57117831 + Pkib protein_coding processed_transcript MGP_129S1SvImJ_T0026874.1 MGP_129S1SvImJ_G0017648.1 mouse_genomes_project 10 94543553 94638244 + MGP_129S1SvImJ_P0026874 Cdk17 protein_coding protein_coding MGP_129S1SvImJ_T0027278.1 MGP_129S1SvImJ_G0017791.1 mouse_genomes_project 10 126335148 126418460 - MGP_129S1SvImJ_P0027278 Mon2 protein_coding protein_coding MGP_129S1SvImJ_T0027279.1 MGP_129S1SvImJ_G0017791.1 mouse_genomes_project 10 126335148 126418460 - MGP_129S1SvImJ_P0027279 Mon2 protein_coding protein_coding MGP_129S1SvImJ_T0027280.1 MGP_129S1SvImJ_G0017791.1 mouse_genomes_project 10 126335148 126418460 - MGP_129S1SvImJ_P0027280 Mon2 protein_coding protein_coding MGP_129S1SvImJ_T0006135.1 MGP_129S1SvImJ_G0005135.1 mouse_genomes_project 10 82342641 82346065 - Gm26896 lincRNA lincRNA MGP_129S1SvImJ_T0024893.1 MGP_129S1SvImJ_G0017116.1 mouse_genomes_project 10 28748628 28809328 - MGP_129S1SvImJ_P0024893 Trmt11 protein_coding protein_coding MGP_129S1SvImJ_T0024916.1 MGP_129S1SvImJ_G0017126.1 mouse_genomes_project 10 31821949 31938501 - MGP_129S1SvImJ_P0024916 Clvs2 protein_coding protein_coding MGP_129S1SvImJ_T0024917.1 MGP_129S1SvImJ_G0017126.1 mouse_genomes_project 10 31863211 31937928 - Clvs2 protein_coding processed_transcript MGP_129S1SvImJ_T0024918.1 MGP_129S1SvImJ_G0017126.1 mouse_genomes_project 10 31904997 31938351 - Clvs2 protein_coding processed_transcript MGP_129S1SvImJ_T0024919.1 MGP_129S1SvImJ_G0017126.1 mouse_genomes_project 10 31909395 31938354 - MGP_129S1SvImJ_P0024919 Clvs2 protein_coding protein_coding MGP_129S1SvImJ_T0026339.1 MGP_129S1SvImJ_G0017520.1 mouse_genomes_project 10 81458242 81460628 + MGP_129S1SvImJ_P0026339 Amh protein_coding protein_coding MGP_129S1SvImJ_T0025180.1 MGP_129S1SvImJ_G0017219.1 mouse_genomes_project 10 50897769 50898791 - MGP_129S1SvImJ_P0025180 4933411G06Rik protein_coding protein_coding MGP_129S1SvImJ_T0027490.1 MGP_129S1SvImJ_G0017860.1 mouse_genomes_project 10 132061213 132090618 + MGP_129S1SvImJ_P0027490 Cs protein_coding protein_coding MGP_129S1SvImJ_T0025380.1 MGP_129S1SvImJ_G0017280.1 mouse_genomes_project 10 60776906 60797249 - MGP_129S1SvImJ_P0025380 Eif4ebp2 protein_coding protein_coding MGP_129S1SvImJ_T0101838.1 MGP_129S1SvImJ_G0039790.1 mouse_genomes_project 10 131469209 131488826 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101839.1 MGP_129S1SvImJ_G0039790.1 mouse_genomes_project 10 131469209 131488831 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0027045.1 MGP_129S1SvImJ_G0017710.1 mouse_genomes_project 10 109716324 109931812 - MGP_129S1SvImJ_P0027045 Ptprq protein_coding protein_coding MGP_129S1SvImJ_T0024924.1 MGP_129S1SvImJ_G0017131.1 mouse_genomes_project 10 32324960 32325026 - MGP_129S1SvImJ_P0024924 Gm17567 protein_coding protein_coding MGP_129S1SvImJ_T0024694.1 MGP_129S1SvImJ_G0017039.1 mouse_genomes_project 10 16224299 16231357 - MGP_129S1SvImJ_P0024694 Hebp2 protein_coding protein_coding MGP_129S1SvImJ_T0006111.1 MGP_129S1SvImJ_G0005117.1 mouse_genomes_project 10 53280559 53285719 + Gm16998 lincRNA lincRNA MGP_129S1SvImJ_T0027358.1 MGP_129S1SvImJ_G0017822.1 mouse_genomes_project 10 130979924 131060587 + MGP_129S1SvImJ_P0027358 R3hdm2 protein_coding protein_coding MGP_129S1SvImJ_T0027359.1 MGP_129S1SvImJ_G0017822.1 mouse_genomes_project 10 130980259 131119533 + MGP_129S1SvImJ_P0027359 R3hdm2 protein_coding protein_coding MGP_129S1SvImJ_T0027360.1 MGP_129S1SvImJ_G0017822.1 mouse_genomes_project 10 130995915 131119556 + MGP_129S1SvImJ_P0027360 R3hdm2 protein_coding protein_coding MGP_129S1SvImJ_T0027361.1 MGP_129S1SvImJ_G0017822.1 mouse_genomes_project 10 130995915 131119556 + MGP_129S1SvImJ_P0027361 R3hdm2 protein_coding protein_coding MGP_129S1SvImJ_T0027362.1 MGP_129S1SvImJ_G0017822.1 mouse_genomes_project 10 131036043 131070140 + MGP_129S1SvImJ_P0027362 R3hdm2 protein_coding protein_coding MGP_129S1SvImJ_T0027363.1 MGP_129S1SvImJ_G0017822.1 mouse_genomes_project 10 131036572 131119522 + MGP_129S1SvImJ_P0027363 R3hdm2 protein_coding protein_coding MGP_129S1SvImJ_T0027364.1 MGP_129S1SvImJ_G0017822.1 mouse_genomes_project 10 131036829 131119204 + MGP_129S1SvImJ_P0027364 R3hdm2 protein_coding protein_coding MGP_129S1SvImJ_T0027365.1 MGP_129S1SvImJ_G0017822.1 mouse_genomes_project 10 131036937 131070905 + MGP_129S1SvImJ_P0027365 R3hdm2 protein_coding protein_coding MGP_129S1SvImJ_T0027366.1 MGP_129S1SvImJ_G0017822.1 mouse_genomes_project 10 131060506 131119540 + MGP_129S1SvImJ_P0027366 R3hdm2 protein_coding protein_coding MGP_129S1SvImJ_T0027367.1 MGP_129S1SvImJ_G0017822.1 mouse_genomes_project 10 131060506 131119557 + MGP_129S1SvImJ_P0027367 R3hdm2 protein_coding protein_coding MGP_129S1SvImJ_T0027368.1 MGP_129S1SvImJ_G0017822.1 mouse_genomes_project 10 131060506 131118882 + MGP_129S1SvImJ_P0027368 R3hdm2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027369.1 MGP_129S1SvImJ_G0017822.1 mouse_genomes_project 10 131060506 131118882 + MGP_129S1SvImJ_P0027369 R3hdm2 protein_coding protein_coding MGP_129S1SvImJ_T0027370.1 MGP_129S1SvImJ_G0017822.1 mouse_genomes_project 10 131077575 131083293 + MGP_129S1SvImJ_P0027370 R3hdm2 protein_coding protein_coding MGP_129S1SvImJ_T0027371.1 MGP_129S1SvImJ_G0017822.1 mouse_genomes_project 10 131077601 131083423 + R3hdm2 protein_coding retained_intron MGP_129S1SvImJ_T0027372.1 MGP_129S1SvImJ_G0017822.1 mouse_genomes_project 10 131077605 131119556 + MGP_129S1SvImJ_P0027372 R3hdm2 protein_coding protein_coding MGP_129S1SvImJ_T0027373.1 MGP_129S1SvImJ_G0017822.1 mouse_genomes_project 10 131077645 131103200 + R3hdm2 protein_coding processed_transcript MGP_129S1SvImJ_T0027374.1 MGP_129S1SvImJ_G0017822.1 mouse_genomes_project 10 131100360 131103591 + R3hdm2 protein_coding retained_intron MGP_129S1SvImJ_T0027375.1 MGP_129S1SvImJ_G0017822.1 mouse_genomes_project 10 131104337 131112897 + R3hdm2 protein_coding retained_intron MGP_129S1SvImJ_T0027376.1 MGP_129S1SvImJ_G0017822.1 mouse_genomes_project 10 131104528 131115316 + MGP_129S1SvImJ_P0027376 R3hdm2 protein_coding protein_coding MGP_129S1SvImJ_T0027377.1 MGP_129S1SvImJ_G0017822.1 mouse_genomes_project 10 131112829 131119540 + MGP_129S1SvImJ_P0027377 R3hdm2 protein_coding protein_coding MGP_129S1SvImJ_T0027578.1 MGP_129S1SvImJ_G0017901.1 mouse_genomes_project 10 133030136 133031072 - MGP_129S1SvImJ_P0027578 Olfr773 protein_coding protein_coding MGP_129S1SvImJ_T0025779.1 MGP_129S1SvImJ_G0017362.1 mouse_genomes_project 10 75956844 75958648 - MGP_129S1SvImJ_P0025779 Ddt protein_coding protein_coding MGP_129S1SvImJ_T0025780.1 MGP_129S1SvImJ_G0017362.1 mouse_genomes_project 10 75956847 75959028 - MGP_129S1SvImJ_P0025780 Ddt protein_coding protein_coding MGP_129S1SvImJ_T0026459.1 MGP_129S1SvImJ_G0017554.1 mouse_genomes_project 10 82069845 82078579 + MGP_129S1SvImJ_P0026459 Mfsd12 protein_coding protein_coding MGP_129S1SvImJ_T0026460.1 MGP_129S1SvImJ_G0017554.1 mouse_genomes_project 10 82069906 82073586 + MGP_129S1SvImJ_P0026460 Mfsd12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025844.1 MGP_129S1SvImJ_G0017386.1 mouse_genomes_project 10 76814655 76822337 + MGP_129S1SvImJ_P0025844 Spatc1l protein_coding protein_coding MGP_129S1SvImJ_T0025845.1 MGP_129S1SvImJ_G0017386.1 mouse_genomes_project 10 76814692 76822166 + MGP_129S1SvImJ_P0025845 Spatc1l protein_coding protein_coding MGP_129S1SvImJ_T0099177.1 MGP_129S1SvImJ_G0037244.1 mouse_genomes_project 10 50297749 50297856 + Gm26257 snRNA snRNA MGP_129S1SvImJ_T0025466.1 MGP_129S1SvImJ_G0017303.1 mouse_genomes_project 10 62058962 62097108 - MGP_129S1SvImJ_P0025466 Ddx50 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0025467.1 MGP_129S1SvImJ_G0017303.1 mouse_genomes_project 10 62058965 62097116 - MGP_129S1SvImJ_P0025467 Ddx50 protein_coding protein_coding MGP_129S1SvImJ_T0099174.1 MGP_129S1SvImJ_G0037241.1 mouse_genomes_project 10 45296122 45296229 + Gm25740 snRNA snRNA MGP_129S1SvImJ_T0009638.1 MGP_129S1SvImJ_G0007754.1 mouse_genomes_project 10 111625031 111625114 - Gm44495 miRNA miRNA MGP_129S1SvImJ_T0025977.1 MGP_129S1SvImJ_G0017416.1 mouse_genomes_project 10 78491923 78502056 + MGP_129S1SvImJ_P0025977 Icosl protein_coding protein_coding MGP_129S1SvImJ_T0025002.1 MGP_129S1SvImJ_G0017158.1 mouse_genomes_project 10 38546588 38569032 - MGP_129S1SvImJ_P0025002 Mfsd4b1 protein_coding protein_coding MGP_129S1SvImJ_T0025003.1 MGP_129S1SvImJ_G0017158.1 mouse_genomes_project 10 38551878 38568923 - Mfsd4b1 protein_coding processed_transcript MGP_129S1SvImJ_T0026355.1 MGP_129S1SvImJ_G0017526.1 mouse_genomes_project 10 81548919 81570144 + MGP_129S1SvImJ_P0026355 Tmprss9 protein_coding protein_coding MGP_129S1SvImJ_T0012419.1 MGP_129S1SvImJ_G0010508.1 mouse_genomes_project 10 37928274 37928653 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0026881.1 MGP_129S1SvImJ_G0017651.1 mouse_genomes_project 10 94906629 94940562 + MGP_129S1SvImJ_P0026881 Hal protein_coding protein_coding MGP_129S1SvImJ_T0026882.1 MGP_129S1SvImJ_G0017651.1 mouse_genomes_project 10 94906664 94937760 + MGP_129S1SvImJ_P0026882 Hal protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026883.1 MGP_129S1SvImJ_G0017651.1 mouse_genomes_project 10 94915810 94919985 + Hal protein_coding retained_intron MGP_129S1SvImJ_T0026884.1 MGP_129S1SvImJ_G0017651.1 mouse_genomes_project 10 94920452 94937984 + Hal protein_coding processed_transcript MGP_129S1SvImJ_T0009646.1 MGP_129S1SvImJ_G0007762.1 mouse_genomes_project 10 129567344 129567417 + Gm22183 miRNA miRNA MGP_129S1SvImJ_T0012413.1 MGP_129S1SvImJ_G0010502.1 mouse_genomes_project 10 23871671 23872289 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0027624.1 MGP_129S1SvImJ_G0017933.1 mouse_genomes_project 10 133703721 133706528 - MGP_129S1SvImJ_P0027624 Olfr811 protein_coding protein_coding MGP_129S1SvImJ_T0100424.1 MGP_129S1SvImJ_G0038491.1 mouse_genomes_project 10 36671826 36671958 + Gm24889 snoRNA snoRNA MGP_129S1SvImJ_T0025141.1 MGP_129S1SvImJ_G0017203.1 mouse_genomes_project 10 43042502 43069874 + MGP_129S1SvImJ_P0025141 protein_coding protein_coding MGP_129S1SvImJ_T0027201.1 MGP_129S1SvImJ_G0017770.1 mouse_genomes_project 10 122542304 123217399 + MGP_129S1SvImJ_P0027201 Grip1 protein_coding protein_coding MGP_129S1SvImJ_T0027202.1 MGP_129S1SvImJ_G0017770.1 mouse_genomes_project 10 122542583 123204289 + MGP_129S1SvImJ_P0027202 Grip1 protein_coding protein_coding MGP_129S1SvImJ_T0027203.1 MGP_129S1SvImJ_G0017770.1 mouse_genomes_project 10 122542589 123205831 + MGP_129S1SvImJ_P0027203 Grip1 protein_coding protein_coding MGP_129S1SvImJ_T0027204.1 MGP_129S1SvImJ_G0017770.1 mouse_genomes_project 10 122932645 123205831 + MGP_129S1SvImJ_P0027204 Grip1 protein_coding protein_coding MGP_129S1SvImJ_T0027205.1 MGP_129S1SvImJ_G0017770.1 mouse_genomes_project 10 122932654 123205208 + MGP_129S1SvImJ_P0027205 Grip1 protein_coding protein_coding MGP_129S1SvImJ_T0027206.1 MGP_129S1SvImJ_G0017770.1 mouse_genomes_project 10 122932761 123132909 + Grip1 protein_coding retained_intron MGP_129S1SvImJ_T0027207.1 MGP_129S1SvImJ_G0017770.1 mouse_genomes_project 10 122932768 123204289 + MGP_129S1SvImJ_P0027207 Grip1 protein_coding protein_coding MGP_129S1SvImJ_T0027208.1 MGP_129S1SvImJ_G0017770.1 mouse_genomes_project 10 122932768 123204289 + MGP_129S1SvImJ_P0027208 Grip1 protein_coding protein_coding MGP_129S1SvImJ_T0027209.1 MGP_129S1SvImJ_G0017770.1 mouse_genomes_project 10 122932771 123204209 + MGP_129S1SvImJ_P0027209 Grip1 protein_coding protein_coding MGP_129S1SvImJ_T0027210.1 MGP_129S1SvImJ_G0017770.1 mouse_genomes_project 10 122932781 123217199 + MGP_129S1SvImJ_P0027210 Grip1 protein_coding protein_coding MGP_129S1SvImJ_T0027211.1 MGP_129S1SvImJ_G0017770.1 mouse_genomes_project 10 122966286 123205826 + Grip1 protein_coding retained_intron MGP_129S1SvImJ_T0027212.1 MGP_129S1SvImJ_G0017770.1 mouse_genomes_project 10 123026986 123204209 + Grip1 protein_coding processed_transcript MGP_129S1SvImJ_T0027213.1 MGP_129S1SvImJ_G0017770.1 mouse_genomes_project 10 123113432 123217400 + MGP_129S1SvImJ_P0027213 Grip1 protein_coding protein_coding MGP_129S1SvImJ_T0027214.1 MGP_129S1SvImJ_G0017770.1 mouse_genomes_project 10 123113634 123205703 + MGP_129S1SvImJ_P0027214 Grip1 protein_coding protein_coding MGP_129S1SvImJ_T0027215.1 MGP_129S1SvImJ_G0017770.1 mouse_genomes_project 10 123113782 123204485 + MGP_129S1SvImJ_P0027215 Grip1 protein_coding protein_coding MGP_129S1SvImJ_T0027216.1 MGP_129S1SvImJ_G0017770.1 mouse_genomes_project 10 123113818 123217399 + MGP_129S1SvImJ_P0027216 Grip1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026209.1 MGP_129S1SvImJ_G0017487.1 mouse_genomes_project 10 80758619 80762275 + MGP_129S1SvImJ_P0026209 1600002K03Rik protein_coding protein_coding MGP_129S1SvImJ_T0027283.1 MGP_129S1SvImJ_G0017794.1 mouse_genomes_project 10 128709033 128810892 - MGP_129S1SvImJ_P0027283 Slc16a7 protein_coding protein_coding MGP_129S1SvImJ_T0027284.1 MGP_129S1SvImJ_G0017794.1 mouse_genomes_project 10 128710063 128789947 - MGP_129S1SvImJ_P0027284 Slc16a7 protein_coding protein_coding MGP_129S1SvImJ_T0027580.1 MGP_129S1SvImJ_G0017903.1 mouse_genomes_project 10 133102669 133338697 + MGP_129S1SvImJ_P0027580 protein_coding protein_coding MGP_129S1SvImJ_T0100428.1 MGP_129S1SvImJ_G0038495.1 mouse_genomes_project 10 38806627 38806840 + Rnu3a snoRNA snoRNA MGP_129S1SvImJ_T0026788.1 MGP_129S1SvImJ_G0017635.1 mouse_genomes_project 10 90567698 90610884 - MGP_129S1SvImJ_P0026788 Gas2l3 protein_coding protein_coding MGP_129S1SvImJ_T0026789.1 MGP_129S1SvImJ_G0017635.1 mouse_genomes_project 10 90567698 90610884 - MGP_129S1SvImJ_P0026789 Gas2l3 protein_coding protein_coding MGP_129S1SvImJ_T0024934.1 MGP_129S1SvImJ_G0017140.1 mouse_genomes_project 10 32639035 32642914 + MGP_129S1SvImJ_P0024934 Tspyl4 protein_coding protein_coding MGP_129S1SvImJ_T0025199.1 MGP_129S1SvImJ_G0017228.1 mouse_genomes_project 10 52455493 52560563 - MGP_129S1SvImJ_P0025199 Cep85l protein_coding protein_coding MGP_129S1SvImJ_T0027120.1 MGP_129S1SvImJ_G0017741.1 mouse_genomes_project 10 118552610 118587464 + MGP_129S1SvImJ_P0027120 Tspan8 protein_coding protein_coding MGP_129S1SvImJ_T0027121.1 MGP_129S1SvImJ_G0017741.1 mouse_genomes_project 10 118552610 118587464 + MGP_129S1SvImJ_P0027121 Tspan8 protein_coding protein_coding MGP_129S1SvImJ_T0027122.1 MGP_129S1SvImJ_G0017741.1 mouse_genomes_project 10 118552610 118587464 + MGP_129S1SvImJ_P0027122 Tspan8 protein_coding protein_coding MGP_129S1SvImJ_T0012458.1 MGP_129S1SvImJ_G0010547.1 mouse_genomes_project 10 120532389 120534047 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024443.1 MGP_129S1SvImJ_G0016984.1 mouse_genomes_project 10 2671043 2684915 + MGP_129S1SvImJ_P0024443 Myct1 protein_coding protein_coding MGP_129S1SvImJ_T0026856.1 MGP_129S1SvImJ_G0017645.1 mouse_genomes_project 10 92441131 92465142 - MGP_129S1SvImJ_P0026856 Tmpo protein_coding protein_coding MGP_129S1SvImJ_T0026857.1 MGP_129S1SvImJ_G0017645.1 mouse_genomes_project 10 92441131 92465142 - MGP_129S1SvImJ_P0026857 Tmpo protein_coding protein_coding MGP_129S1SvImJ_T0026858.1 MGP_129S1SvImJ_G0017645.1 mouse_genomes_project 10 92441131 92465142 - MGP_129S1SvImJ_P0026858 Tmpo protein_coding protein_coding MGP_129S1SvImJ_T0026859.1 MGP_129S1SvImJ_G0017645.1 mouse_genomes_project 10 92441131 92465142 - MGP_129S1SvImJ_P0026859 Tmpo protein_coding protein_coding MGP_129S1SvImJ_T0026860.1 MGP_129S1SvImJ_G0017645.1 mouse_genomes_project 10 92453977 92465142 - MGP_129S1SvImJ_P0026860 Tmpo protein_coding protein_coding MGP_129S1SvImJ_T0025720.1 MGP_129S1SvImJ_G0017349.1 mouse_genomes_project 10 75099285 75150247 + MGP_129S1SvImJ_P0025720 Gnaz protein_coding protein_coding MGP_129S1SvImJ_T0025721.1 MGP_129S1SvImJ_G0017349.1 mouse_genomes_project 10 75099317 75124148 + Gnaz protein_coding processed_transcript MGP_129S1SvImJ_T0025722.1 MGP_129S1SvImJ_G0017349.1 mouse_genomes_project 10 75122944 75150236 + MGP_129S1SvImJ_P0025722 Gnaz protein_coding protein_coding MGP_129S1SvImJ_T0012449.1 MGP_129S1SvImJ_G0010538.1 mouse_genomes_project 10 87989091 87989500 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0027237.1 MGP_129S1SvImJ_G0017777.1 mouse_genomes_project 10 123980563 124052055 - Msrb3 protein_coding processed_transcript MGP_129S1SvImJ_T0027238.1 MGP_129S1SvImJ_G0017777.1 mouse_genomes_project 10 123980705 124074021 - MGP_129S1SvImJ_P0027238 Msrb3 protein_coding protein_coding MGP_129S1SvImJ_T0027239.1 MGP_129S1SvImJ_G0017777.1 mouse_genomes_project 10 123980879 124104248 - MGP_129S1SvImJ_P0027239 Msrb3 protein_coding protein_coding MGP_129S1SvImJ_T0017157.1 MGP_129S1SvImJ_G0015139.1 mouse_genomes_project 10 87670197 87671174 - Gm15344 processed_transcript processed_transcript MGP_129S1SvImJ_T0027467.1 MGP_129S1SvImJ_G0017852.1 mouse_genomes_project 10 131935367 131941383 + MGP_129S1SvImJ_P0027467 Mip protein_coding protein_coding MGP_129S1SvImJ_T0027195.1 MGP_129S1SvImJ_G0017767.1 mouse_genomes_project 10 121446973 121451811 + MGP_129S1SvImJ_P0027195 Ifng protein_coding protein_coding MGP_129S1SvImJ_T0027584.1 MGP_129S1SvImJ_G0017906.1 mouse_genomes_project 10 133205141 133206166 + MGP_129S1SvImJ_P0027584 Olfr780 protein_coding protein_coding MGP_129S1SvImJ_T0006114.1 MGP_129S1SvImJ_G0005120.1 mouse_genomes_project 10 60317628 60324398 + Gm20611 lincRNA lincRNA MGP_129S1SvImJ_T0009586.1 MGP_129S1SvImJ_G0007702.1 mouse_genomes_project 10 23063327 23063412 + Gm22566 miRNA miRNA MGP_129S1SvImJ_T0024588.1 MGP_129S1SvImJ_G0017017.1 mouse_genomes_project 10 10390386 10394244 + MGP_129S1SvImJ_P0024588 Sf3b5 protein_coding protein_coding MGP_129S1SvImJ_T0099162.1 MGP_129S1SvImJ_G0037229.1 mouse_genomes_project 10 21077295 21077402 - Gm24655 snRNA snRNA MGP_129S1SvImJ_T0000856.1 MGP_129S1SvImJ_G0000789.1 mouse_genomes_project 10 116628576 116629180 + TEC TEC MGP_129S1SvImJ_T0099194.1 MGP_129S1SvImJ_G0037261.1 mouse_genomes_project 10 85693601 85693698 - Gm24226 snRNA snRNA MGP_129S1SvImJ_T0027190.1 MGP_129S1SvImJ_G0017765.1 mouse_genomes_project 10 121141010 121173372 + MGP_129S1SvImJ_P0027190 Mdm1 protein_coding protein_coding MGP_129S1SvImJ_T0027191.1 MGP_129S1SvImJ_G0017765.1 mouse_genomes_project 10 121141010 121173372 + MGP_129S1SvImJ_P0027191 Mdm1 protein_coding protein_coding MGP_129S1SvImJ_T0027192.1 MGP_129S1SvImJ_G0017765.1 mouse_genomes_project 10 121141010 121173372 + MGP_129S1SvImJ_P0027192 Mdm1 protein_coding protein_coding MGP_129S1SvImJ_T0027193.1 MGP_129S1SvImJ_G0017765.1 mouse_genomes_project 10 121141010 121173372 + MGP_129S1SvImJ_P0027193 Mdm1 protein_coding protein_coding MGP_129S1SvImJ_T0025933.1 MGP_129S1SvImJ_G0017411.1 mouse_genomes_project 10 78309168 78371141 - MGP_129S1SvImJ_P0025933 Trpm2 protein_coding protein_coding MGP_129S1SvImJ_T0025934.1 MGP_129S1SvImJ_G0017411.1 mouse_genomes_project 10 78310611 78368758 - Trpm2 protein_coding processed_transcript MGP_129S1SvImJ_T0025935.1 MGP_129S1SvImJ_G0017411.1 mouse_genomes_project 10 78310749 78333211 - Trpm2 protein_coding retained_intron MGP_129S1SvImJ_T0025936.1 MGP_129S1SvImJ_G0017411.1 mouse_genomes_project 10 78310807 78334408 - Trpm2 protein_coding retained_intron MGP_129S1SvImJ_T0025937.1 MGP_129S1SvImJ_G0017411.1 mouse_genomes_project 10 78317504 78322257 - Trpm2 protein_coding retained_intron MGP_129S1SvImJ_T0025938.1 MGP_129S1SvImJ_G0017411.1 mouse_genomes_project 10 78318735 78339414 - Trpm2 protein_coding retained_intron MGP_129S1SvImJ_T0025939.1 MGP_129S1SvImJ_G0017411.1 mouse_genomes_project 10 78364090 78371091 - MGP_129S1SvImJ_P0025939 Trpm2 protein_coding protein_coding MGP_129S1SvImJ_T0025940.1 MGP_129S1SvImJ_G0017411.1 mouse_genomes_project 10 78368345 78371850 - Trpm2 protein_coding processed_transcript MGP_129S1SvImJ_T0025101.1 MGP_129S1SvImJ_G0017188.1 mouse_genomes_project 10 41486314 41562442 + MGP_129S1SvImJ_P0025101 Sec63 protein_coding protein_coding MGP_129S1SvImJ_T0025102.1 MGP_129S1SvImJ_G0017188.1 mouse_genomes_project 10 41486433 41560285 + Sec63 protein_coding retained_intron MGP_129S1SvImJ_T0025103.1 MGP_129S1SvImJ_G0017188.1 mouse_genomes_project 10 41486624 41542448 + Sec63 protein_coding retained_intron MGP_129S1SvImJ_T0025104.1 MGP_129S1SvImJ_G0017188.1 mouse_genomes_project 10 41547620 41559173 + Sec63 protein_coding processed_transcript MGP_129S1SvImJ_T0025105.1 MGP_129S1SvImJ_G0017188.1 mouse_genomes_project 10 41547620 41559176 + Sec63 protein_coding processed_transcript MGP_129S1SvImJ_T0006187.1 MGP_129S1SvImJ_G0005167.1 mouse_genomes_project 10 132844941 132849788 - lincRNA lincRNA MGP_129S1SvImJ_T0025264.1 MGP_129S1SvImJ_G0017250.1 mouse_genomes_project 10 57827392 57827677 + MGP_129S1SvImJ_P0025264 BB019430 protein_coding protein_coding MGP_129S1SvImJ_T0024754.1 MGP_129S1SvImJ_G0017060.1 mouse_genomes_project 10 19103759 19107757 + MGP_129S1SvImJ_P0024754 protein_coding protein_coding MGP_129S1SvImJ_T0026058.1 MGP_129S1SvImJ_G0017455.1 mouse_genomes_project 10 80258823 80278257 + MGP_129S1SvImJ_P0026058 Hcn2 protein_coding protein_coding MGP_129S1SvImJ_T0024729.1 MGP_129S1SvImJ_G0017054.1 mouse_genomes_project 10 18055150 18086299 + MGP_129S1SvImJ_P0024729 Bclaf1 protein_coding protein_coding MGP_129S1SvImJ_T0024730.1 MGP_129S1SvImJ_G0017054.1 mouse_genomes_project 10 18055153 18084065 + MGP_129S1SvImJ_P0024730 Bclaf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024731.1 MGP_129S1SvImJ_G0017054.1 mouse_genomes_project 10 18055165 18086297 + MGP_129S1SvImJ_P0024731 Bclaf1 protein_coding protein_coding MGP_129S1SvImJ_T0024732.1 MGP_129S1SvImJ_G0017054.1 mouse_genomes_project 10 18055209 18065226 + Bclaf1 protein_coding retained_intron MGP_129S1SvImJ_T0024733.1 MGP_129S1SvImJ_G0017054.1 mouse_genomes_project 10 18055210 18084061 + MGP_129S1SvImJ_P0024733 Bclaf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024734.1 MGP_129S1SvImJ_G0017054.1 mouse_genomes_project 10 18055218 18084062 + MGP_129S1SvImJ_P0024734 Bclaf1 protein_coding protein_coding MGP_129S1SvImJ_T0024735.1 MGP_129S1SvImJ_G0017054.1 mouse_genomes_project 10 18066350 18088410 + MGP_129S1SvImJ_P0024735 Bclaf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024736.1 MGP_129S1SvImJ_G0017054.1 mouse_genomes_project 10 18068672 18076068 + MGP_129S1SvImJ_P0024736 Bclaf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024737.1 MGP_129S1SvImJ_G0017054.1 mouse_genomes_project 10 18071676 18077700 + Bclaf1 protein_coding retained_intron MGP_129S1SvImJ_T0024738.1 MGP_129S1SvImJ_G0017054.1 mouse_genomes_project 10 18077063 18084005 + Bclaf1 protein_coding retained_intron MGP_129S1SvImJ_T0026886.1 MGP_129S1SvImJ_G0017653.1 mouse_genomes_project 10 94961813 95008766 + MGP_129S1SvImJ_P0026886 Ccdc38 protein_coding protein_coding MGP_129S1SvImJ_T0026887.1 MGP_129S1SvImJ_G0017653.1 mouse_genomes_project 10 94971170 94976427 + Ccdc38 protein_coding retained_intron MGP_129S1SvImJ_T0026888.1 MGP_129S1SvImJ_G0017653.1 mouse_genomes_project 10 94975716 94976472 + Ccdc38 protein_coding retained_intron MGP_129S1SvImJ_T0026889.1 MGP_129S1SvImJ_G0017653.1 mouse_genomes_project 10 94975719 95007659 + Ccdc38 protein_coding processed_transcript MGP_129S1SvImJ_T0026890.1 MGP_129S1SvImJ_G0017653.1 mouse_genomes_project 10 94989517 94998676 + Ccdc38 protein_coding processed_transcript MGP_129S1SvImJ_T0026967.1 MGP_129S1SvImJ_G0017681.1 mouse_genomes_project 10 99473011 99474893 - MGP_129S1SvImJ_P0026967 C030005K15Rik protein_coding protein_coding MGP_129S1SvImJ_T0026750.1 MGP_129S1SvImJ_G0017627.1 mouse_genomes_project 10 89536966 89565157 - MGP_129S1SvImJ_P0026750 Chpt1 protein_coding protein_coding MGP_129S1SvImJ_T0026751.1 MGP_129S1SvImJ_G0017627.1 mouse_genomes_project 10 89537225 89569589 - MGP_129S1SvImJ_P0026751 Chpt1 protein_coding protein_coding MGP_129S1SvImJ_T0026755.1 MGP_129S1SvImJ_G0017627.1 mouse_genomes_project 10 89557046 89581931 - MGP_129S1SvImJ_P0026755 Chpt1 protein_coding protein_coding MGP_129S1SvImJ_T0026756.1 MGP_129S1SvImJ_G0017627.1 mouse_genomes_project 10 89561070 89595897 - MGP_129S1SvImJ_P0026756 Chpt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026757.1 MGP_129S1SvImJ_G0017627.1 mouse_genomes_project 10 89561533 89594281 - MGP_129S1SvImJ_P0026757 Chpt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026758.1 MGP_129S1SvImJ_G0017627.1 mouse_genomes_project 10 89561533 89594349 - MGP_129S1SvImJ_P0026758 Chpt1 protein_coding protein_coding MGP_129S1SvImJ_T0026759.1 MGP_129S1SvImJ_G0017627.1 mouse_genomes_project 10 89561555 89594349 - MGP_129S1SvImJ_P0026759 Chpt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026760.1 MGP_129S1SvImJ_G0017627.1 mouse_genomes_project 10 89576321 89594349 - MGP_129S1SvImJ_P0026760 Chpt1 protein_coding protein_coding MGP_129S1SvImJ_T0026761.1 MGP_129S1SvImJ_G0017627.1 mouse_genomes_project 10 89577770 89594349 - MGP_129S1SvImJ_P0026761 Chpt1 protein_coding protein_coding MGP_129S1SvImJ_T0026931.1 MGP_129S1SvImJ_G0017663.1 mouse_genomes_project 10 95772282 95777303 - MGP_129S1SvImJ_P0026931 protein_coding protein_coding MGP_129S1SvImJ_T0026932.1 MGP_129S1SvImJ_G0017663.1 mouse_genomes_project 10 95775621 95777207 - protein_coding retained_intron MGP_129S1SvImJ_T0025005.1 MGP_129S1SvImJ_G0017160.1 mouse_genomes_project 10 38769317 38793821 - MGP_129S1SvImJ_P0025005 Rpf2 protein_coding protein_coding MGP_129S1SvImJ_T0025006.1 MGP_129S1SvImJ_G0017160.1 mouse_genomes_project 10 38769498 38793855 - MGP_129S1SvImJ_P0025006 Rpf2 protein_coding protein_coding MGP_129S1SvImJ_T0025007.1 MGP_129S1SvImJ_G0017160.1 mouse_genomes_project 10 38769754 38773870 - Rpf2 protein_coding processed_transcript MGP_129S1SvImJ_T0025008.1 MGP_129S1SvImJ_G0017160.1 mouse_genomes_project 10 38769884 38793822 - MGP_129S1SvImJ_P0025008 Rpf2 protein_coding protein_coding MGP_129S1SvImJ_T0025009.1 MGP_129S1SvImJ_G0017160.1 mouse_genomes_project 10 38769959 38793846 - MGP_129S1SvImJ_P0025009 Rpf2 protein_coding protein_coding MGP_129S1SvImJ_T0025010.1 MGP_129S1SvImJ_G0017160.1 mouse_genomes_project 10 38771411 38793812 - MGP_129S1SvImJ_P0025010 Rpf2 protein_coding protein_coding MGP_129S1SvImJ_T0025772.1 MGP_129S1SvImJ_G0017359.1 mouse_genomes_project 10 75764054 75792015 + MGP_129S1SvImJ_P0025772 Ggt5 protein_coding protein_coding MGP_129S1SvImJ_T0025773.1 MGP_129S1SvImJ_G0017359.1 mouse_genomes_project 10 75764095 75779961 + MGP_129S1SvImJ_P0025773 Ggt5 protein_coding protein_coding MGP_129S1SvImJ_T0025774.1 MGP_129S1SvImJ_G0017359.1 mouse_genomes_project 10 75764506 75779963 + MGP_129S1SvImJ_P0025774 Ggt5 protein_coding protein_coding MGP_129S1SvImJ_T0025775.1 MGP_129S1SvImJ_G0017359.1 mouse_genomes_project 10 75778640 75784066 + Ggt5 protein_coding processed_transcript MGP_129S1SvImJ_T0025993.1 MGP_129S1SvImJ_G0017422.1 mouse_genomes_project 10 78879871 78881818 + MGP_129S1SvImJ_P0025993 Cstb protein_coding protein_coding MGP_129S1SvImJ_T0026801.1 MGP_129S1SvImJ_G0017639.1 mouse_genomes_project 10 90909587 90930946 - MGP_129S1SvImJ_P0026801 Actr6 protein_coding protein_coding MGP_129S1SvImJ_T0026692.1 MGP_129S1SvImJ_G0017611.1 mouse_genomes_project 10 87633892 87635344 + MGP_129S1SvImJ_P0026692 Gm6729 protein_coding protein_coding MGP_129S1SvImJ_T0009594.1 MGP_129S1SvImJ_G0007710.1 mouse_genomes_project 10 58103542 58103746 + Gm27672 miRNA miRNA MGP_129S1SvImJ_T0026077.1 MGP_129S1SvImJ_G0017460.1 mouse_genomes_project 10 80325167 80332675 - MGP_129S1SvImJ_P0026077 Prss57 protein_coding protein_coding MGP_129S1SvImJ_T0026078.1 MGP_129S1SvImJ_G0017460.1 mouse_genomes_project 10 80325169 80334651 - MGP_129S1SvImJ_P0026078 Prss57 protein_coding protein_coding MGP_129S1SvImJ_T0026079.1 MGP_129S1SvImJ_G0017460.1 mouse_genomes_project 10 80326611 80328251 - MGP_129S1SvImJ_P0026079 Prss57 protein_coding protein_coding MGP_129S1SvImJ_T0026080.1 MGP_129S1SvImJ_G0017460.1 mouse_genomes_project 10 80326789 80328269 - MGP_129S1SvImJ_P0026080 Prss57 protein_coding protein_coding MGP_129S1SvImJ_T0026340.1 MGP_129S1SvImJ_G0017521.1 mouse_genomes_project 10 81461481 81472268 - MGP_129S1SvImJ_P0026340 Jsrp1 protein_coding protein_coding MGP_129S1SvImJ_T0026341.1 MGP_129S1SvImJ_G0017521.1 mouse_genomes_project 10 81461483 81473875 - MGP_129S1SvImJ_P0026341 Jsrp1 protein_coding protein_coding MGP_129S1SvImJ_T0026342.1 MGP_129S1SvImJ_G0017521.1 mouse_genomes_project 10 81461486 81473878 - MGP_129S1SvImJ_P0026342 Jsrp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026343.1 MGP_129S1SvImJ_G0017521.1 mouse_genomes_project 10 81463967 81473881 - MGP_129S1SvImJ_P0026343 Jsrp1 protein_coding protein_coding MGP_129S1SvImJ_T0012434.1 MGP_129S1SvImJ_G0010523.1 mouse_genomes_project 10 60631798 60632239 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0026024.1 MGP_129S1SvImJ_G0017444.1 mouse_genomes_project 10 80056406 80063719 - Plpp2 protein_coding processed_transcript MGP_129S1SvImJ_T0026025.1 MGP_129S1SvImJ_G0017444.1 mouse_genomes_project 10 80057108 80063652 - MGP_129S1SvImJ_P0026025 Plpp2 protein_coding protein_coding MGP_129S1SvImJ_T0026026.1 MGP_129S1SvImJ_G0017444.1 mouse_genomes_project 10 80057463 80063749 - MGP_129S1SvImJ_P0026026 Plpp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024807.1 MGP_129S1SvImJ_G0017088.1 mouse_genomes_project 10 22049879 22054942 - MGP_129S1SvImJ_P0024807 protein_coding protein_coding MGP_129S1SvImJ_T0009587.1 MGP_129S1SvImJ_G0007703.1 mouse_genomes_project 10 26337276 26337359 - Gm22370 miRNA miRNA MGP_129S1SvImJ_T0025148.1 MGP_129S1SvImJ_G0017207.1 mouse_genomes_project 10 44067862 44213902 + MGP_129S1SvImJ_P0025148 Popdc3 protein_coding protein_coding MGP_129S1SvImJ_T0025149.1 MGP_129S1SvImJ_G0017207.1 mouse_genomes_project 10 44182815 44217240 + MGP_129S1SvImJ_P0025149 Popdc3 protein_coding protein_coding MGP_129S1SvImJ_T0025150.1 MGP_129S1SvImJ_G0017207.1 mouse_genomes_project 10 44182912 44216905 + MGP_129S1SvImJ_P0025150 Popdc3 protein_coding protein_coding MGP_129S1SvImJ_T0098702.1 MGP_129S1SvImJ_G0036787.1 mouse_genomes_project 10 41550138 41550443 - Gm26464 ribozyme ribozyme MGP_129S1SvImJ_T0026650.1 MGP_129S1SvImJ_G0017597.1 mouse_genomes_project 10 86004422 86019395 + MGP_129S1SvImJ_P0026650 Tmem263 protein_coding protein_coding MGP_129S1SvImJ_T0009628.1 MGP_129S1SvImJ_G0007744.1 mouse_genomes_project 10 94847564 94847620 + Mir7688 miRNA miRNA MGP_129S1SvImJ_T0025073.1 MGP_129S1SvImJ_G0017181.1 mouse_genomes_project 10 40474552 40573911 + MGP_129S1SvImJ_P0025073 Sesn1 protein_coding protein_coding MGP_129S1SvImJ_T0025074.1 MGP_129S1SvImJ_G0017181.1 mouse_genomes_project 10 40545559 40573911 + MGP_129S1SvImJ_P0025074 Sesn1 protein_coding protein_coding MGP_129S1SvImJ_T0025941.1 MGP_129S1SvImJ_G0017412.1 mouse_genomes_project 10 78381887 78388797 + MGP_129S1SvImJ_P0025941 1810043G02Rik protein_coding protein_coding MGP_129S1SvImJ_T0025942.1 MGP_129S1SvImJ_G0017412.1 mouse_genomes_project 10 78382017 78388618 + 1810043G02Rik protein_coding retained_intron MGP_129S1SvImJ_T0025943.1 MGP_129S1SvImJ_G0017412.1 mouse_genomes_project 10 78382034 78388797 + 1810043G02Rik protein_coding retained_intron MGP_129S1SvImJ_T0025944.1 MGP_129S1SvImJ_G0017412.1 mouse_genomes_project 10 78382036 78390268 + MGP_129S1SvImJ_P0025944 1810043G02Rik protein_coding protein_coding MGP_129S1SvImJ_T0025945.1 MGP_129S1SvImJ_G0017412.1 mouse_genomes_project 10 78382044 78388799 + 1810043G02Rik protein_coding retained_intron MGP_129S1SvImJ_T0025946.1 MGP_129S1SvImJ_G0017412.1 mouse_genomes_project 10 78382056 78383886 + 1810043G02Rik protein_coding processed_transcript MGP_129S1SvImJ_T0025947.1 MGP_129S1SvImJ_G0017412.1 mouse_genomes_project 10 78383856 78387842 + 1810043G02Rik protein_coding processed_transcript MGP_129S1SvImJ_T0025948.1 MGP_129S1SvImJ_G0017412.1 mouse_genomes_project 10 78385127 78386260 + 1810043G02Rik protein_coding processed_transcript MGP_129S1SvImJ_T0025138.1 MGP_129S1SvImJ_G0017200.1 mouse_genomes_project 10 43042466 43069875 + MGP_129S1SvImJ_P0025138 protein_coding protein_coding MGP_129S1SvImJ_T0099196.1 MGP_129S1SvImJ_G0037263.1 mouse_genomes_project 10 88382548 88382655 - Gm23191 snRNA snRNA MGP_129S1SvImJ_T0100467.1 MGP_129S1SvImJ_G0038534.1 mouse_genomes_project 10 132076591 132076726 + Gm23182 snoRNA snoRNA MGP_129S1SvImJ_T0006124.1 MGP_129S1SvImJ_G0005126.1 mouse_genomes_project 10 66329620 66330565 + Gm28139 lincRNA lincRNA MGP_129S1SvImJ_T0026509.1 MGP_129S1SvImJ_G0017564.1 mouse_genomes_project 10 82254923 82272906 - MGP_129S1SvImJ_P0026509 Gna11 protein_coding protein_coding MGP_129S1SvImJ_T0026510.1 MGP_129S1SvImJ_G0017564.1 mouse_genomes_project 10 82256486 82258214 - Gna11 protein_coding retained_intron MGP_129S1SvImJ_T0026511.1 MGP_129S1SvImJ_G0017564.1 mouse_genomes_project 10 82260864 82262865 - Gna11 protein_coding retained_intron MGP_129S1SvImJ_T0025152.1 MGP_129S1SvImJ_G0017209.1 mouse_genomes_project 10 44280450 44379138 - MGP_129S1SvImJ_P0025152 Lin28b protein_coding protein_coding MGP_129S1SvImJ_T0025153.1 MGP_129S1SvImJ_G0017209.1 mouse_genomes_project 10 44284895 44378396 - MGP_129S1SvImJ_P0025153 Lin28b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0026381.1 MGP_129S1SvImJ_G0017535.1 mouse_genomes_project 10 81761952 81778219 - MGP_129S1SvImJ_P0026381 Creb3l3 protein_coding protein_coding MGP_129S1SvImJ_T0026382.1 MGP_129S1SvImJ_G0017535.1 mouse_genomes_project 10 81769288 81771921 - Creb3l3 protein_coding retained_intron MGP_129S1SvImJ_T0026383.1 MGP_129S1SvImJ_G0017535.1 mouse_genomes_project 10 81769968 81771252 - Creb3l3 protein_coding retained_intron MGP_129S1SvImJ_T0026384.1 MGP_129S1SvImJ_G0017535.1 mouse_genomes_project 10 81771976 81778099 - Creb3l3 protein_coding processed_transcript MGP_129S1SvImJ_T0026001.1 MGP_129S1SvImJ_G0017428.1 mouse_genomes_project 10 79174733 79180988 - MGP_129S1SvImJ_P0026001 Casp14 protein_coding protein_coding MGP_129S1SvImJ_T0024972.1 MGP_129S1SvImJ_G0017151.1 mouse_genomes_project 10 37869970 38023489 + MGP_129S1SvImJ_P0024972 Fyn protein_coding protein_coding MGP_129S1SvImJ_T0024973.1 MGP_129S1SvImJ_G0017151.1 mouse_genomes_project 10 37870887 38078548 + MGP_129S1SvImJ_P0024973 Fyn protein_coding protein_coding MGP_129S1SvImJ_T0024974.1 MGP_129S1SvImJ_G0017151.1 mouse_genomes_project 10 37870921 38078539 + MGP_129S1SvImJ_P0024974 Fyn protein_coding protein_coding MGP_129S1SvImJ_T0024975.1 MGP_129S1SvImJ_G0017151.1 mouse_genomes_project 10 37870926 38077590 + MGP_129S1SvImJ_P0024975 Fyn protein_coding protein_coding MGP_129S1SvImJ_T0024976.1 MGP_129S1SvImJ_G0017151.1 mouse_genomes_project 10 37871281 38078541 + MGP_129S1SvImJ_P0024976 Fyn protein_coding protein_coding MGP_129S1SvImJ_T0024977.1 MGP_129S1SvImJ_G0017151.1 mouse_genomes_project 10 37921927 38019680 + MGP_129S1SvImJ_P0024977 Fyn protein_coding protein_coding MGP_129S1SvImJ_T0024978.1 MGP_129S1SvImJ_G0017151.1 mouse_genomes_project 10 37961453 38077522 + MGP_129S1SvImJ_P0024978 Fyn protein_coding protein_coding MGP_129S1SvImJ_T0024979.1 MGP_129S1SvImJ_G0017151.1 mouse_genomes_project 10 37961563 38077522 + MGP_129S1SvImJ_P0024979 Fyn protein_coding protein_coding MGP_129S1SvImJ_T0024980.1 MGP_129S1SvImJ_G0017151.1 mouse_genomes_project 10 38045166 38064599 + Fyn protein_coding processed_transcript MGP_129S1SvImJ_T0000839.1 MGP_129S1SvImJ_G0000773.1 mouse_genomes_project 10 25747060 25748850 - TEC TEC MGP_129S1SvImJ_T0003029.1 MGP_129S1SvImJ_G0002838.1 mouse_genomes_project 10 11610065 11615988 - Gm28289 antisense antisense MGP_129S1SvImJ_T0024407.1 MGP_129S1SvImJ_G0016976.1 mouse_genomes_project 10 1243581 1347720 + MGP_129S1SvImJ_P0024407 Akap12 protein_coding protein_coding MGP_129S1SvImJ_T0100458.1 MGP_129S1SvImJ_G0038525.1 mouse_genomes_project 10 113255605 113255727 - Gm22186 snoRNA snoRNA MGP_129S1SvImJ_T0012465.1 MGP_129S1SvImJ_G0010554.1 mouse_genomes_project 10 134065261 134066232 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0025831.1 MGP_129S1SvImJ_G0017381.1 mouse_genomes_project 10 76583539 76680271 - MGP_129S1SvImJ_P0025831 Pcnt protein_coding protein_coding MGP_129S1SvImJ_T0025832.1 MGP_129S1SvImJ_G0017381.1 mouse_genomes_project 10 76583543 76680116 - MGP_129S1SvImJ_P0025832 Pcnt protein_coding unknown_likely_coding MGP_129S1SvImJ_T0027611.1 MGP_129S1SvImJ_G0017924.1 mouse_genomes_project 10 133569047 133570183 - MGP_129S1SvImJ_P0027611 Olfr802 protein_coding protein_coding MGP_129S1SvImJ_T0027612.1 MGP_129S1SvImJ_G0017924.1 mouse_genomes_project 10 133569047 133573384 - MGP_129S1SvImJ_P0027612 Olfr802 protein_coding protein_coding MGP_129S1SvImJ_T0017160.1 MGP_129S1SvImJ_G0015141.1 mouse_genomes_project 10 123525061 123543594 + 1700006J14Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017161.1 MGP_129S1SvImJ_G0015141.1 mouse_genomes_project 10 123525062 123545094 + 1700006J14Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017162.1 MGP_129S1SvImJ_G0015141.1 mouse_genomes_project 10 123525074 123541482 + 1700006J14Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017163.1 MGP_129S1SvImJ_G0015141.1 mouse_genomes_project 10 123525117 123544587 + 1700006J14Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0024881.1 MGP_129S1SvImJ_G0017111.1 mouse_genomes_project 10 27386303 27404894 + MGP_129S1SvImJ_P0024881 9330159F19Rik protein_coding protein_coding MGP_129S1SvImJ_T0003100.1 MGP_129S1SvImJ_G0002893.1 mouse_genomes_project 10 95102822 95111882 - Gm15915 antisense antisense MGP_129S1SvImJ_T0025882.1 MGP_129S1SvImJ_G0017396.1 mouse_genomes_project 10 77588012 77721472 - MGP_129S1SvImJ_P0025882 Adarb1 protein_coding protein_coding MGP_129S1SvImJ_T0025883.1 MGP_129S1SvImJ_G0017396.1 mouse_genomes_project 10 77588012 77721467 - MGP_129S1SvImJ_P0025883 Adarb1 protein_coding protein_coding MGP_129S1SvImJ_T0025884.1 MGP_129S1SvImJ_G0017396.1 mouse_genomes_project 10 77588013 77721472 - MGP_129S1SvImJ_P0025884 Adarb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025885.1 MGP_129S1SvImJ_G0017396.1 mouse_genomes_project 10 77588013 77721429 - MGP_129S1SvImJ_P0025885 Adarb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025886.1 MGP_129S1SvImJ_G0017396.1 mouse_genomes_project 10 77588013 77721429 - MGP_129S1SvImJ_P0025886 Adarb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025887.1 MGP_129S1SvImJ_G0017396.1 mouse_genomes_project 10 77588014 77721472 - MGP_129S1SvImJ_P0025887 Adarb1 protein_coding protein_coding MGP_129S1SvImJ_T0025888.1 MGP_129S1SvImJ_G0017396.1 mouse_genomes_project 10 77616756 77721413 - Adarb1 protein_coding retained_intron MGP_129S1SvImJ_T0025889.1 MGP_129S1SvImJ_G0017396.1 mouse_genomes_project 10 77616770 77721467 - Adarb1 protein_coding retained_intron MGP_129S1SvImJ_T0025890.1 MGP_129S1SvImJ_G0017396.1 mouse_genomes_project 10 77625142 77721440 - Adarb1 protein_coding retained_intron MGP_129S1SvImJ_T0025891.1 MGP_129S1SvImJ_G0017396.1 mouse_genomes_project 10 77627689 77721056 - Adarb1 protein_coding retained_intron MGP_129S1SvImJ_T0025892.1 MGP_129S1SvImJ_G0017396.1 mouse_genomes_project 10 77627880 77721419 - Adarb1 protein_coding retained_intron MGP_129S1SvImJ_T0025893.1 MGP_129S1SvImJ_G0017396.1 mouse_genomes_project 10 77628066 77642412 - Adarb1 protein_coding retained_intron MGP_129S1SvImJ_T0025894.1 MGP_129S1SvImJ_G0017396.1 mouse_genomes_project 10 77628141 77673567 - Adarb1 protein_coding retained_intron MGP_129S1SvImJ_T0012446.1 MGP_129S1SvImJ_G0010535.1 mouse_genomes_project 10 80449819 80450069 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0026408.1 MGP_129S1SvImJ_G0017543.1 mouse_genomes_project 10 81904349 81931973 - MGP_129S1SvImJ_P0026408 Atcay protein_coding protein_coding MGP_129S1SvImJ_T0026409.1 MGP_129S1SvImJ_G0017543.1 mouse_genomes_project 10 81904349 81931925 - MGP_129S1SvImJ_P0026409 Atcay protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026410.1 MGP_129S1SvImJ_G0017543.1 mouse_genomes_project 10 81910193 81913658 - Atcay protein_coding retained_intron MGP_129S1SvImJ_T0024719.1 MGP_129S1SvImJ_G0017051.1 mouse_genomes_project 10 17666232 17877852 + MGP_129S1SvImJ_P0024719 Map3k5 protein_coding protein_coding MGP_129S1SvImJ_T0024720.1 MGP_129S1SvImJ_G0017051.1 mouse_genomes_project 10 17666286 17876768 + MGP_129S1SvImJ_P0024720 Map3k5 protein_coding protein_coding MGP_129S1SvImJ_T0024721.1 MGP_129S1SvImJ_G0017051.1 mouse_genomes_project 10 17666981 17831373 + MGP_129S1SvImJ_P0024721 Map3k5 protein_coding protein_coding MGP_129S1SvImJ_T0024722.1 MGP_129S1SvImJ_G0017051.1 mouse_genomes_project 10 17682793 17751613 + MGP_129S1SvImJ_P0024722 Map3k5 protein_coding protein_coding MGP_129S1SvImJ_T0024723.1 MGP_129S1SvImJ_G0017051.1 mouse_genomes_project 10 17830739 17836632 + Map3k5 protein_coding processed_transcript MGP_129S1SvImJ_T0024724.1 MGP_129S1SvImJ_G0017051.1 mouse_genomes_project 10 17860155 17863040 + Map3k5 protein_coding retained_intron MGP_129S1SvImJ_T0024725.1 MGP_129S1SvImJ_G0017051.1 mouse_genomes_project 10 17863039 17873651 + Map3k5 protein_coding retained_intron MGP_129S1SvImJ_T0026361.1 MGP_129S1SvImJ_G0017530.1 mouse_genomes_project 10 81622256 81691261 - MGP_129S1SvImJ_P0026361 Gng7 protein_coding protein_coding MGP_129S1SvImJ_T0026362.1 MGP_129S1SvImJ_G0017530.1 mouse_genomes_project 10 81622256 81674196 - MGP_129S1SvImJ_P0026362 Gng7 protein_coding protein_coding MGP_129S1SvImJ_T0026363.1 MGP_129S1SvImJ_G0017530.1 mouse_genomes_project 10 81622256 81691241 - MGP_129S1SvImJ_P0026363 Gng7 protein_coding protein_coding MGP_129S1SvImJ_T0026364.1 MGP_129S1SvImJ_G0017530.1 mouse_genomes_project 10 81622261 81674209 - MGP_129S1SvImJ_P0026364 Gng7 protein_coding protein_coding MGP_129S1SvImJ_T0026365.1 MGP_129S1SvImJ_G0017530.1 mouse_genomes_project 10 81624819 81671031 - MGP_129S1SvImJ_P0026365 Gng7 protein_coding protein_coding MGP_129S1SvImJ_T0026366.1 MGP_129S1SvImJ_G0017530.1 mouse_genomes_project 10 81625344 81691229 - MGP_129S1SvImJ_P0026366 Gng7 protein_coding protein_coding MGP_129S1SvImJ_T0017164.1 MGP_129S1SvImJ_G0015142.1 mouse_genomes_project 10 124059215 124065661 + Gm15910 processed_transcript processed_transcript MGP_129S1SvImJ_T0027410.1 MGP_129S1SvImJ_G0017831.1 mouse_genomes_project 10 131331011 131347251 + MGP_129S1SvImJ_P0027410 Myo1a protein_coding protein_coding MGP_129S1SvImJ_T0027411.1 MGP_129S1SvImJ_G0017831.1 mouse_genomes_project 10 131331097 131360258 + MGP_129S1SvImJ_P0027411 Myo1a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0024697.1 MGP_129S1SvImJ_G0017042.1 mouse_genomes_project 10 16541394 16553369 + MGP_129S1SvImJ_P0024697 Perp protein_coding protein_coding MGP_129S1SvImJ_T0099180.1 MGP_129S1SvImJ_G0037247.1 mouse_genomes_project 10 53937931 53937993 - Gm25602 snRNA snRNA MGP_129S1SvImJ_T0006093.1 MGP_129S1SvImJ_G0005102.1 mouse_genomes_project 10 11416297 11460641 - Gm26835 lincRNA lincRNA MGP_129S1SvImJ_T0100450.1 MGP_129S1SvImJ_G0038517.1 mouse_genomes_project 10 99493636 99493764 - Gm25658 snoRNA snoRNA MGP_129S1SvImJ_T0012398.1 MGP_129S1SvImJ_G0010487.1 mouse_genomes_project 10 810419 810728 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0025193.1 MGP_129S1SvImJ_G0017224.1 mouse_genomes_project 10 51512880 51512967 + MGP_129S1SvImJ_P0025193 Gm26741 protein_coding protein_coding MGP_129S1SvImJ_T0027189.1 MGP_129S1SvImJ_G0017764.1 mouse_genomes_project 10 120780714 120813223 - MGP_129S1SvImJ_P0027189 Rap1b protein_coding protein_coding MGP_129S1SvImJ_T0012433.1 MGP_129S1SvImJ_G0010522.1 mouse_genomes_project 10 60631798 60632163 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0025734.1 MGP_129S1SvImJ_G0017352.1 mouse_genomes_project 10 75358026 75468969 + MGP_129S1SvImJ_P0025734 Specc1l protein_coding protein_coding MGP_129S1SvImJ_T0025735.1 MGP_129S1SvImJ_G0017352.1 mouse_genomes_project 10 75378603 75468969 + MGP_129S1SvImJ_P0025735 Specc1l protein_coding protein_coding MGP_129S1SvImJ_T0027285.1 MGP_129S1SvImJ_G0017795.1 mouse_genomes_project 10 129489869 129544795 + MGP_129S1SvImJ_P0027285 Lrig3 protein_coding protein_coding MGP_129S1SvImJ_T0027497.1 MGP_129S1SvImJ_G0017864.1 mouse_genomes_project 10 132135106 132143405 - MGP_129S1SvImJ_P0027497 Nabp2 protein_coding protein_coding MGP_129S1SvImJ_T0027498.1 MGP_129S1SvImJ_G0017864.1 mouse_genomes_project 10 132135106 132143551 - MGP_129S1SvImJ_P0027498 Nabp2 protein_coding protein_coding MGP_129S1SvImJ_T0027499.1 MGP_129S1SvImJ_G0017864.1 mouse_genomes_project 10 132135185 132143399 - MGP_129S1SvImJ_P0027499 Nabp2 protein_coding protein_coding MGP_129S1SvImJ_T0027500.1 MGP_129S1SvImJ_G0017864.1 mouse_genomes_project 10 132135301 132142520 - Nabp2 protein_coding retained_intron MGP_129S1SvImJ_T0027501.1 MGP_129S1SvImJ_G0017864.1 mouse_genomes_project 10 132135611 132143309 - MGP_129S1SvImJ_P0027501 Nabp2 protein_coding protein_coding MGP_129S1SvImJ_T0027502.1 MGP_129S1SvImJ_G0017864.1 mouse_genomes_project 10 132135621 132144228 - MGP_129S1SvImJ_P0027502 Nabp2 protein_coding protein_coding MGP_129S1SvImJ_T0027503.1 MGP_129S1SvImJ_G0017864.1 mouse_genomes_project 10 132141839 132142857 - MGP_129S1SvImJ_P0027503 Nabp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027504.1 MGP_129S1SvImJ_G0017864.1 mouse_genomes_project 10 132142395 132145169 - MGP_129S1SvImJ_P0027504 Nabp2 protein_coding protein_coding MGP_129S1SvImJ_T0027505.1 MGP_129S1SvImJ_G0017864.1 mouse_genomes_project 10 132142423 132143413 - MGP_129S1SvImJ_P0027505 Nabp2 protein_coding protein_coding MGP_129S1SvImJ_T0027416.1 MGP_129S1SvImJ_G0017835.1 mouse_genomes_project 10 131391490 131403468 + MGP_129S1SvImJ_P0027416 protein_coding protein_coding MGP_129S1SvImJ_T0025378.1 MGP_129S1SvImJ_G0017278.1 mouse_genomes_project 10 60646223 60716515 - MGP_129S1SvImJ_P0025378 Pald1 protein_coding protein_coding MGP_129S1SvImJ_T0026885.1 MGP_129S1SvImJ_G0017652.1 mouse_genomes_project 10 94944597 94961203 - MGP_129S1SvImJ_P0026885 Amdhd1 protein_coding protein_coding MGP_129S1SvImJ_T0006141.1 MGP_129S1SvImJ_G0005140.1 mouse_genomes_project 10 87666396 87672885 + lincRNA lincRNA MGP_129S1SvImJ_T0003102.1 MGP_129S1SvImJ_G0002895.1 mouse_genomes_project 10 100991759 100997104 - Gm16239 antisense antisense MGP_129S1SvImJ_T0006129.1 MGP_129S1SvImJ_G0005131.1 mouse_genomes_project 10 77804705 77836331 + 2810425M01Rik lincRNA lincRNA MGP_129S1SvImJ_T0025175.1 MGP_129S1SvImJ_G0017216.1 mouse_genomes_project 10 50722795 50727856 - MGP_129S1SvImJ_P0025175 Fam162b protein_coding protein_coding MGP_129S1SvImJ_T0025781.1 MGP_129S1SvImJ_G0017363.1 mouse_genomes_project 10 75957065 75966563 - MGP_129S1SvImJ_P0025781 Gm20441 protein_coding protein_coding MGP_129S1SvImJ_T0009633.1 MGP_129S1SvImJ_G0007749.1 mouse_genomes_project 10 99140197 99140282 + Mir3966 miRNA miRNA MGP_129S1SvImJ_T0027511.1 MGP_129S1SvImJ_G0017867.1 mouse_genomes_project 10 132234699 132239899 - MGP_129S1SvImJ_P0027511 Myl6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0027512.1 MGP_129S1SvImJ_G0017867.1 mouse_genomes_project 10 132234701 132239963 - MGP_129S1SvImJ_P0027512 Myl6 protein_coding protein_coding MGP_129S1SvImJ_T0024444.1 MGP_129S1SvImJ_G0016985.1 mouse_genomes_project 10 2721871 2730270 + MGP_129S1SvImJ_P0024444 Vip protein_coding protein_coding MGP_129S1SvImJ_T0026020.1 MGP_129S1SvImJ_G0017440.1 mouse_genomes_project 10 79612407 79665855 + MGP_129S1SvImJ_P0026020 Vmn2r80 protein_coding protein_coding MGP_129S1SvImJ_T0025266.1 MGP_129S1SvImJ_G0017252.1 mouse_genomes_project 10 57947076 58189399 + MGP_129S1SvImJ_P0025266 Sh3rf3 protein_coding protein_coding MGP_129S1SvImJ_T0025267.1 MGP_129S1SvImJ_G0017252.1 mouse_genomes_project 10 57947175 58281459 + MGP_129S1SvImJ_P0025267 Sh3rf3 protein_coding protein_coding MGP_129S1SvImJ_T0025268.1 MGP_129S1SvImJ_G0017252.1 mouse_genomes_project 10 57947776 58148559 + Sh3rf3 protein_coding retained_intron MGP_129S1SvImJ_T0025269.1 MGP_129S1SvImJ_G0017252.1 mouse_genomes_project 10 58205983 58247781 + Sh3rf3 protein_coding retained_intron MGP_129S1SvImJ_T0025270.1 MGP_129S1SvImJ_G0017252.1 mouse_genomes_project 10 58222145 58247259 + Sh3rf3 protein_coding processed_transcript MGP_129S1SvImJ_T0026191.1 MGP_129S1SvImJ_G0017484.1 mouse_genomes_project 10 80723727 80727542 + Atp5d protein_coding processed_transcript MGP_129S1SvImJ_T0026192.1 MGP_129S1SvImJ_G0017484.1 mouse_genomes_project 10 80726598 80730955 + MGP_129S1SvImJ_P0026192 Atp5d protein_coding protein_coding MGP_129S1SvImJ_T0026193.1 MGP_129S1SvImJ_G0017484.1 mouse_genomes_project 10 80727456 80730960 + MGP_129S1SvImJ_P0026193 Atp5d protein_coding protein_coding MGP_129S1SvImJ_T0026194.1 MGP_129S1SvImJ_G0017484.1 mouse_genomes_project 10 80727511 80730954 + MGP_129S1SvImJ_P0026194 Atp5d protein_coding protein_coding MGP_129S1SvImJ_T0025552.1 MGP_129S1SvImJ_G0017327.1 mouse_genomes_project 10 67675531 67702040 - MGP_129S1SvImJ_P0025552 Zfp365 protein_coding protein_coding MGP_129S1SvImJ_T0025553.1 MGP_129S1SvImJ_G0017327.1 mouse_genomes_project 10 67675596 67690683 - Zfp365 protein_coding processed_transcript MGP_129S1SvImJ_T0025554.1 MGP_129S1SvImJ_G0017327.1 mouse_genomes_project 10 67679364 67688369 - Zfp365 protein_coding processed_transcript MGP_129S1SvImJ_T0025555.1 MGP_129S1SvImJ_G0017327.1 mouse_genomes_project 10 67686066 67701813 - Zfp365 protein_coding retained_intron MGP_129S1SvImJ_T0009631.1 MGP_129S1SvImJ_G0007747.1 mouse_genomes_project 10 97145014 97145105 - Mir3058 miRNA miRNA MGP_129S1SvImJ_T0100445.1 MGP_129S1SvImJ_G0038512.1 mouse_genomes_project 10 81876511 81876575 + Snord37 snoRNA snoRNA MGP_129S1SvImJ_T0098438.1 MGP_129S1SvImJ_G0036523.1 mouse_genomes_project 10 43529341 43529452 + Gm27977 rRNA rRNA MGP_129S1SvImJ_T0003044.1 MGP_129S1SvImJ_G0002849.1 mouse_genomes_project 10 38906433 38908027 - Cdk19os antisense antisense MGP_129S1SvImJ_T0003045.1 MGP_129S1SvImJ_G0002849.1 mouse_genomes_project 10 38907017 38908027 - Cdk19os antisense antisense MGP_129S1SvImJ_T0009596.1 MGP_129S1SvImJ_G0007712.1 mouse_genomes_project 10 59432349 59432416 - Gm22117 miRNA miRNA MGP_129S1SvImJ_T0100449.1 MGP_129S1SvImJ_G0038516.1 mouse_genomes_project 10 97513672 97513805 + Gm24433 snoRNA snoRNA MGP_129S1SvImJ_T0026304.1 MGP_129S1SvImJ_G0017507.1 mouse_genomes_project 10 81196125 81206345 - MGP_129S1SvImJ_P0026304 Klf16 protein_coding protein_coding MGP_129S1SvImJ_T0026552.1 MGP_129S1SvImJ_G0017570.1 mouse_genomes_project 10 82366296 82376051 + MGP_129S1SvImJ_P0026552 Ankrd24 protein_coding protein_coding MGP_129S1SvImJ_T0026553.1 MGP_129S1SvImJ_G0017570.1 mouse_genomes_project 10 82366335 82367504 + MGP_129S1SvImJ_P0026553 Ankrd24 protein_coding protein_coding MGP_129S1SvImJ_T0026554.1 MGP_129S1SvImJ_G0017570.1 mouse_genomes_project 10 82366389 82385375 + MGP_129S1SvImJ_P0026554 Ankrd24 protein_coding protein_coding MGP_129S1SvImJ_T0026555.1 MGP_129S1SvImJ_G0017570.1 mouse_genomes_project 10 82366462 82367499 + MGP_129S1SvImJ_P0026555 Ankrd24 protein_coding protein_coding MGP_129S1SvImJ_T0026556.1 MGP_129S1SvImJ_G0017570.1 mouse_genomes_project 10 82371451 82380774 + MGP_129S1SvImJ_P0026556 Ankrd24 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026557.1 MGP_129S1SvImJ_G0017570.1 mouse_genomes_project 10 82371455 82385372 + Ankrd24 protein_coding retained_intron MGP_129S1SvImJ_T0026558.1 MGP_129S1SvImJ_G0017570.1 mouse_genomes_project 10 82371455 82374172 + MGP_129S1SvImJ_P0026558 Ankrd24 protein_coding protein_coding MGP_129S1SvImJ_T0026559.1 MGP_129S1SvImJ_G0017570.1 mouse_genomes_project 10 82371461 82373649 + Ankrd24 protein_coding retained_intron MGP_129S1SvImJ_T0026560.1 MGP_129S1SvImJ_G0017570.1 mouse_genomes_project 10 82371461 82377650 + MGP_129S1SvImJ_P0026560 Ankrd24 protein_coding protein_coding MGP_129S1SvImJ_T0026561.1 MGP_129S1SvImJ_G0017570.1 mouse_genomes_project 10 82371469 82377994 + MGP_129S1SvImJ_P0026561 Ankrd24 protein_coding protein_coding MGP_129S1SvImJ_T0026562.1 MGP_129S1SvImJ_G0017570.1 mouse_genomes_project 10 82378682 82380714 + MGP_129S1SvImJ_P0026562 Ankrd24 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026563.1 MGP_129S1SvImJ_G0017570.1 mouse_genomes_project 10 82378694 82383732 + Ankrd24 protein_coding retained_intron MGP_129S1SvImJ_T0026564.1 MGP_129S1SvImJ_G0017570.1 mouse_genomes_project 10 82381565 82385239 + MGP_129S1SvImJ_P0026564 Ankrd24 protein_coding protein_coding MGP_129S1SvImJ_T0026565.1 MGP_129S1SvImJ_G0017570.1 mouse_genomes_project 10 82384396 82384926 + Ankrd24 protein_coding retained_intron MGP_129S1SvImJ_T0025219.1 MGP_129S1SvImJ_G0017235.1 mouse_genomes_project 10 55408439 55419258 + MGP_129S1SvImJ_P0025219 Msl3l2 protein_coding protein_coding MGP_129S1SvImJ_T0025896.1 MGP_129S1SvImJ_G0017398.1 mouse_genomes_project 10 77850881 77900430 + MGP_129S1SvImJ_P0025896 Itgb2 protein_coding protein_coding MGP_129S1SvImJ_T0025897.1 MGP_129S1SvImJ_G0017398.1 mouse_genomes_project 10 77850976 77880230 + MGP_129S1SvImJ_P0025897 Itgb2 protein_coding protein_coding MGP_129S1SvImJ_T0025898.1 MGP_129S1SvImJ_G0017398.1 mouse_genomes_project 10 77850999 77881707 + MGP_129S1SvImJ_P0025898 Itgb2 protein_coding protein_coding MGP_129S1SvImJ_T0025899.1 MGP_129S1SvImJ_G0017398.1 mouse_genomes_project 10 77851003 77900366 + MGP_129S1SvImJ_P0025899 Itgb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025900.1 MGP_129S1SvImJ_G0017398.1 mouse_genomes_project 10 77851009 77900452 + MGP_129S1SvImJ_P0025900 Itgb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0000852.1 MGP_129S1SvImJ_G0000785.1 mouse_genomes_project 10 107220782 107221489 - TEC TEC MGP_129S1SvImJ_T0009636.1 MGP_129S1SvImJ_G0007752.1 mouse_genomes_project 10 109671846 109671975 + Gm44403 miRNA miRNA MGP_129S1SvImJ_T0006140.1 MGP_129S1SvImJ_G0005139.1 mouse_genomes_project 10 85492568 85495815 - Gm17249 lincRNA lincRNA MGP_129S1SvImJ_T0100422.1 MGP_129S1SvImJ_G0038489.1 mouse_genomes_project 10 33462477 33462611 + Gm26341 snoRNA snoRNA MGP_129S1SvImJ_T0025118.1 MGP_129S1SvImJ_G0017192.1 mouse_genomes_project 10 41977237 42171892 + MGP_129S1SvImJ_P0025118 Pdss2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025119.1 MGP_129S1SvImJ_G0017192.1 mouse_genomes_project 10 41977237 42209940 + MGP_129S1SvImJ_P0025119 Pdss2 protein_coding protein_coding MGP_129S1SvImJ_T0025120.1 MGP_129S1SvImJ_G0017192.1 mouse_genomes_project 10 41977268 42113647 + Pdss2 protein_coding retained_intron MGP_129S1SvImJ_T0025121.1 MGP_129S1SvImJ_G0017192.1 mouse_genomes_project 10 41977351 42236280 + MGP_129S1SvImJ_P0025121 Pdss2 protein_coding protein_coding MGP_129S1SvImJ_T0025122.1 MGP_129S1SvImJ_G0017192.1 mouse_genomes_project 10 41977487 42113244 + Pdss2 protein_coding retained_intron MGP_129S1SvImJ_T0025123.1 MGP_129S1SvImJ_G0017192.1 mouse_genomes_project 10 42159229 42209586 + MGP_129S1SvImJ_P0025123 Pdss2 protein_coding protein_coding MGP_129S1SvImJ_T0100423.1 MGP_129S1SvImJ_G0038490.1 mouse_genomes_project 10 35195440 35195587 - Gm22554 snoRNA snoRNA MGP_129S1SvImJ_T0025924.1 MGP_129S1SvImJ_G0017404.1 mouse_genomes_project 10 78056578 78057131 + MGP_129S1SvImJ_P0025924 Gm10024 protein_coding protein_coding MGP_129S1SvImJ_T0024641.1 MGP_129S1SvImJ_G0017026.1 mouse_genomes_project 10 11415351 11611571 + MGP_129S1SvImJ_P0024641 Hivep2 protein_coding protein_coding MGP_129S1SvImJ_T0024642.1 MGP_129S1SvImJ_G0017026.1 mouse_genomes_project 10 11415655 11612357 + MGP_129S1SvImJ_P0024642 Hivep2 protein_coding protein_coding MGP_129S1SvImJ_T0024643.1 MGP_129S1SvImJ_G0017026.1 mouse_genomes_project 10 11415655 11612356 + MGP_129S1SvImJ_P0024643 Hivep2 protein_coding protein_coding MGP_129S1SvImJ_T0024644.1 MGP_129S1SvImJ_G0017026.1 mouse_genomes_project 10 11415920 11589786 + MGP_129S1SvImJ_P0024644 Hivep2 protein_coding protein_coding MGP_129S1SvImJ_T0024645.1 MGP_129S1SvImJ_G0017026.1 mouse_genomes_project 10 11416234 11458051 + Hivep2 protein_coding retained_intron MGP_129S1SvImJ_T0024646.1 MGP_129S1SvImJ_G0017026.1 mouse_genomes_project 10 11416297 11535442 + Hivep2 protein_coding processed_transcript MGP_129S1SvImJ_T0009629.1 MGP_129S1SvImJ_G0007745.1 mouse_genomes_project 10 95409594 95409690 - Mir331 miRNA miRNA MGP_129S1SvImJ_T0098804.1 MGP_129S1SvImJ_G0036888.1 mouse_genomes_project 10 95886596 95888438 + Gm16155 sense_intronic sense_intronic MGP_129S1SvImJ_T0026115.1 MGP_129S1SvImJ_G0017467.1 mouse_genomes_project 10 80451857 80453661 + MGP_129S1SvImJ_P0026115 Cfd protein_coding protein_coding MGP_129S1SvImJ_T0027302.1 MGP_129S1SvImJ_G0017801.1 mouse_genomes_project 10 130617471 130619266 + MGP_129S1SvImJ_P0027302 Mettl1 protein_coding protein_coding MGP_129S1SvImJ_T0027303.1 MGP_129S1SvImJ_G0017801.1 mouse_genomes_project 10 130618014 130620086 + Mettl1 protein_coding retained_intron MGP_129S1SvImJ_T0027304.1 MGP_129S1SvImJ_G0017801.1 mouse_genomes_project 10 130618036 130623601 + MGP_129S1SvImJ_P0027304 Mettl1 protein_coding protein_coding MGP_129S1SvImJ_T0027305.1 MGP_129S1SvImJ_G0017801.1 mouse_genomes_project 10 130618040 130621983 + MGP_129S1SvImJ_P0027305 Mettl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027642.1 MGP_129S1SvImJ_G0017948.1 mouse_genomes_project 10 134219552 134233490 - MGP_129S1SvImJ_P0027642 Neurod4 protein_coding protein_coding MGP_129S1SvImJ_T0006171.1 MGP_129S1SvImJ_G0005155.1 mouse_genomes_project 10 114020383 114027950 - 4933440J02Rik lincRNA lincRNA MGP_129S1SvImJ_T0025255.1 MGP_129S1SvImJ_G0017246.1 mouse_genomes_project 10 57414918 57523463 + MGP_129S1SvImJ_P0025255 Lims1 protein_coding protein_coding MGP_129S1SvImJ_T0025256.1 MGP_129S1SvImJ_G0017246.1 mouse_genomes_project 10 57491306 57520555 + MGP_129S1SvImJ_P0025256 Lims1 protein_coding protein_coding MGP_129S1SvImJ_T0025257.1 MGP_129S1SvImJ_G0017246.1 mouse_genomes_project 10 57491321 57520350 + MGP_129S1SvImJ_P0025257 Lims1 protein_coding protein_coding MGP_129S1SvImJ_T0025258.1 MGP_129S1SvImJ_G0017246.1 mouse_genomes_project 10 57505300 57507580 + Lims1 protein_coding processed_transcript MGP_129S1SvImJ_T0025259.1 MGP_129S1SvImJ_G0017246.1 mouse_genomes_project 10 57515428 57520436 + Lims1 protein_coding processed_transcript MGP_129S1SvImJ_T0026848.1 MGP_129S1SvImJ_G0017644.1 mouse_genomes_project 10 92405150 92413144 - MGP_129S1SvImJ_P0026848 Slc25a3 protein_coding protein_coding MGP_129S1SvImJ_T0026849.1 MGP_129S1SvImJ_G0017644.1 mouse_genomes_project 10 92405367 92413042 - MGP_129S1SvImJ_P0026849 Slc25a3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026850.1 MGP_129S1SvImJ_G0017644.1 mouse_genomes_project 10 92405368 92413088 - MGP_129S1SvImJ_P0026850 Slc25a3 protein_coding protein_coding MGP_129S1SvImJ_T0026851.1 MGP_129S1SvImJ_G0017644.1 mouse_genomes_project 10 92405384 92413040 - MGP_129S1SvImJ_P0026851 Slc25a3 protein_coding protein_coding MGP_129S1SvImJ_T0026852.1 MGP_129S1SvImJ_G0017644.1 mouse_genomes_project 10 92405587 92408922 - Slc25a3 protein_coding retained_intron MGP_129S1SvImJ_T0026853.1 MGP_129S1SvImJ_G0017644.1 mouse_genomes_project 10 92407257 92409810 - Slc25a3 protein_coding processed_transcript MGP_129S1SvImJ_T0026854.1 MGP_129S1SvImJ_G0017644.1 mouse_genomes_project 10 92407283 92411308 - Slc25a3 protein_coding retained_intron MGP_129S1SvImJ_T0026855.1 MGP_129S1SvImJ_G0017644.1 mouse_genomes_project 10 92408859 92413107 - Slc25a3 protein_coding retained_intron MGP_129S1SvImJ_T0026023.1 MGP_129S1SvImJ_G0017443.1 mouse_genomes_project 10 79993515 80014958 + MGP_129S1SvImJ_P0026023 Vmn2r83 protein_coding protein_coding MGP_129S1SvImJ_T0012454.1 MGP_129S1SvImJ_G0010543.1 mouse_genomes_project 10 105637824 105638820 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0027038.1 MGP_129S1SvImJ_G0017706.1 mouse_genomes_project 10 109084484 109295628 - MGP_129S1SvImJ_P0027038 Acss3 protein_coding protein_coding MGP_129S1SvImJ_T0027039.1 MGP_129S1SvImJ_G0017706.1 mouse_genomes_project 10 109112863 109295628 - MGP_129S1SvImJ_P0027039 Acss3 protein_coding protein_coding MGP_129S1SvImJ_T0027040.1 MGP_129S1SvImJ_G0017706.1 mouse_genomes_project 10 109274402 109295609 - Acss3 protein_coding processed_transcript MGP_129S1SvImJ_T0009656.1 MGP_129S1SvImJ_G0007772.1 mouse_genomes_project 10 132259028 132259091 - Mir6916 miRNA miRNA MGP_129S1SvImJ_T0027487.1 MGP_129S1SvImJ_G0017858.1 mouse_genomes_project 10 132024476 132042602 + MGP_129S1SvImJ_P0027487 Pan2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0027488.1 MGP_129S1SvImJ_G0017858.1 mouse_genomes_project 10 132024482 132042608 + MGP_129S1SvImJ_P0027488 Pan2 protein_coding protein_coding MGP_129S1SvImJ_T0026953.1 MGP_129S1SvImJ_G0017669.1 mouse_genomes_project 10 97042886 97068397 - MGP_129S1SvImJ_P0026953 Mrpl42 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0025196.1 MGP_129S1SvImJ_G0017226.1 mouse_genomes_project 10 51577005 51599651 + MGP_129S1SvImJ_P0025196 Nus1 protein_coding protein_coding MGP_129S1SvImJ_T0025197.1 MGP_129S1SvImJ_G0017226.1 mouse_genomes_project 10 51588389 51592831 + MGP_129S1SvImJ_P0025197 Nus1 protein_coding protein_coding MGP_129S1SvImJ_T0099170.1 MGP_129S1SvImJ_G0037237.1 mouse_genomes_project 10 40035451 40035558 + Gm25626 snRNA snRNA MGP_129S1SvImJ_T0024821.1 MGP_129S1SvImJ_G0017095.1 mouse_genomes_project 10 22866435 22911660 + MGP_129S1SvImJ_P0024821 Med23 protein_coding protein_coding MGP_129S1SvImJ_T0024822.1 MGP_129S1SvImJ_G0017095.1 mouse_genomes_project 10 22866486 22892252 + Med23 protein_coding retained_intron MGP_129S1SvImJ_T0024823.1 MGP_129S1SvImJ_G0017095.1 mouse_genomes_project 10 22866486 22904739 + MGP_129S1SvImJ_P0024823 Med23 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024824.1 MGP_129S1SvImJ_G0017095.1 mouse_genomes_project 10 22866496 22911438 + MGP_129S1SvImJ_P0024824 Med23 protein_coding protein_coding MGP_129S1SvImJ_T0024825.1 MGP_129S1SvImJ_G0017095.1 mouse_genomes_project 10 22866547 22896413 + Med23 protein_coding processed_transcript MGP_129S1SvImJ_T0024826.1 MGP_129S1SvImJ_G0017095.1 mouse_genomes_project 10 22866758 22875029 + MGP_129S1SvImJ_P0024826 Med23 protein_coding protein_coding MGP_129S1SvImJ_T0024827.1 MGP_129S1SvImJ_G0017095.1 mouse_genomes_project 10 22867092 22872115 + Med23 protein_coding retained_intron MGP_129S1SvImJ_T0024828.1 MGP_129S1SvImJ_G0017095.1 mouse_genomes_project 10 22873391 22890504 + MGP_129S1SvImJ_P0024828 Med23 protein_coding protein_coding MGP_129S1SvImJ_T0024829.1 MGP_129S1SvImJ_G0017095.1 mouse_genomes_project 10 22884918 22910997 + MGP_129S1SvImJ_P0024829 Med23 protein_coding protein_coding MGP_129S1SvImJ_T0024830.1 MGP_129S1SvImJ_G0017095.1 mouse_genomes_project 10 22887434 22890496 + Med23 protein_coding retained_intron MGP_129S1SvImJ_T0026596.1 MGP_129S1SvImJ_G0017580.1 mouse_genomes_project 10 83489862 83505311 - MGP_129S1SvImJ_P0026596 Nfyb protein_coding protein_coding MGP_129S1SvImJ_T0026597.1 MGP_129S1SvImJ_G0017580.1 mouse_genomes_project 10 83490454 83505268 - Nfyb protein_coding retained_intron MGP_129S1SvImJ_T0026598.1 MGP_129S1SvImJ_G0017580.1 mouse_genomes_project 10 83491643 83492827 - Nfyb protein_coding retained_intron MGP_129S1SvImJ_T0026599.1 MGP_129S1SvImJ_G0017580.1 mouse_genomes_project 10 83492333 83493716 - Nfyb protein_coding retained_intron MGP_129S1SvImJ_T0026600.1 MGP_129S1SvImJ_G0017580.1 mouse_genomes_project 10 83493581 83504825 - Nfyb protein_coding processed_transcript MGP_129S1SvImJ_T0026601.1 MGP_129S1SvImJ_G0017580.1 mouse_genomes_project 10 83493683 83504808 - MGP_129S1SvImJ_P0026601 Nfyb protein_coding protein_coding MGP_129S1SvImJ_T0026602.1 MGP_129S1SvImJ_G0017580.1 mouse_genomes_project 10 83496231 83498472 - Nfyb protein_coding retained_intron MGP_129S1SvImJ_T0006143.1 MGP_129S1SvImJ_G0005142.1 mouse_genomes_project 10 90882948 90898478 + 1500026H17Rik lincRNA lincRNA MGP_129S1SvImJ_T0026002.1 MGP_129S1SvImJ_G0017429.1 mouse_genomes_project 10 79207447 79213587 - MGP_129S1SvImJ_P0026002 Ccdc105 protein_coding protein_coding MGP_129S1SvImJ_T0024779.1 MGP_129S1SvImJ_G0017069.1 mouse_genomes_project 10 20633976 20661540 - MGP_129S1SvImJ_P0024779 Tbpl1 protein_coding protein_coding MGP_129S1SvImJ_T0024780.1 MGP_129S1SvImJ_G0017069.1 mouse_genomes_project 10 20635475 20662031 - MGP_129S1SvImJ_P0024780 Tbpl1 protein_coding protein_coding MGP_129S1SvImJ_T0024781.1 MGP_129S1SvImJ_G0017069.1 mouse_genomes_project 10 20635617 20636480 - Tbpl1 protein_coding processed_transcript MGP_129S1SvImJ_T0024782.1 MGP_129S1SvImJ_G0017069.1 mouse_genomes_project 10 20641875 20661454 - Tbpl1 protein_coding retained_intron MGP_129S1SvImJ_T0025161.1 MGP_129S1SvImJ_G0017211.1 mouse_genomes_project 10 48100210 48850758 - MGP_129S1SvImJ_P0025161 Grik2 protein_coding protein_coding MGP_129S1SvImJ_T0025162.1 MGP_129S1SvImJ_G0017211.1 mouse_genomes_project 10 48100593 48257388 - Grik2 protein_coding retained_intron MGP_129S1SvImJ_T0025163.1 MGP_129S1SvImJ_G0017211.1 mouse_genomes_project 10 48100593 48845267 - MGP_129S1SvImJ_P0025163 Grik2 protein_coding protein_coding MGP_129S1SvImJ_T0025164.1 MGP_129S1SvImJ_G0017211.1 mouse_genomes_project 10 48101477 48845267 - MGP_129S1SvImJ_P0025164 Grik2 protein_coding protein_coding MGP_129S1SvImJ_T0025165.1 MGP_129S1SvImJ_G0017211.1 mouse_genomes_project 10 48101739 48845417 - MGP_129S1SvImJ_P0025165 Grik2 protein_coding protein_coding MGP_129S1SvImJ_T0025166.1 MGP_129S1SvImJ_G0017211.1 mouse_genomes_project 10 48101878 48104682 - Grik2 protein_coding retained_intron MGP_129S1SvImJ_T0025167.1 MGP_129S1SvImJ_G0017211.1 mouse_genomes_project 10 48106529 48845267 - MGP_129S1SvImJ_P0025167 Grik2 protein_coding protein_coding MGP_129S1SvImJ_T0025168.1 MGP_129S1SvImJ_G0017211.1 mouse_genomes_project 10 48535575 48850746 - MGP_129S1SvImJ_P0025168 Grik2 protein_coding protein_coding MGP_129S1SvImJ_T0024857.1 MGP_129S1SvImJ_G0017105.1 mouse_genomes_project 10 25087100 25097213 - Lama2 protein_coding retained_intron MGP_129S1SvImJ_T0024858.1 MGP_129S1SvImJ_G0017105.1 mouse_genomes_project 10 25088349 25750365 - MGP_129S1SvImJ_P0024858 Lama2 protein_coding protein_coding MGP_129S1SvImJ_T0024859.1 MGP_129S1SvImJ_G0017105.1 mouse_genomes_project 10 25088559 25750318 - MGP_129S1SvImJ_P0024859 Lama2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0024860.1 MGP_129S1SvImJ_G0017105.1 mouse_genomes_project 10 25308711 25750318 - MGP_129S1SvImJ_P0024860 Lama2 protein_coding protein_coding MGP_129S1SvImJ_T0024861.1 MGP_129S1SvImJ_G0017105.1 mouse_genomes_project 10 25386178 25750464 - Lama2 protein_coding retained_intron MGP_129S1SvImJ_T0024862.1 MGP_129S1SvImJ_G0017105.1 mouse_genomes_project 10 25473736 25750388 - Lama2 protein_coding retained_intron MGP_129S1SvImJ_T0024863.1 MGP_129S1SvImJ_G0017105.1 mouse_genomes_project 10 25545431 25753280 - Lama2 protein_coding retained_intron MGP_129S1SvImJ_T0024864.1 MGP_129S1SvImJ_G0017105.1 mouse_genomes_project 10 25599607 25750388 - Lama2 protein_coding processed_transcript MGP_129S1SvImJ_T0026278.1 MGP_129S1SvImJ_G0017502.1 mouse_genomes_project 10 81007034 81010804 - Uqcr11 protein_coding processed_transcript MGP_129S1SvImJ_T0026279.1 MGP_129S1SvImJ_G0017502.1 mouse_genomes_project 10 81007034 81010868 - MGP_129S1SvImJ_P0026279 Uqcr11 protein_coding protein_coding MGP_129S1SvImJ_T0026280.1 MGP_129S1SvImJ_G0017502.1 mouse_genomes_project 10 81007035 81010833 - Uqcr11 protein_coding processed_transcript MGP_129S1SvImJ_T0027092.1 MGP_129S1SvImJ_G0017727.1 mouse_genomes_project 10 114670605 114732960 + MGP_129S1SvImJ_P0027092 protein_coding protein_coding MGP_129S1SvImJ_T0098294.1 MGP_129S1SvImJ_G0036379.1 mouse_genomes_project 10 75764856 75765368 - pseudogene pseudogene MGP_129S1SvImJ_T0024853.1 MGP_129S1SvImJ_G0017104.1 mouse_genomes_project 10 24840674 24961337 + MGP_129S1SvImJ_P0024853 Arhgap18 protein_coding protein_coding MGP_129S1SvImJ_T0024854.1 MGP_129S1SvImJ_G0017104.1 mouse_genomes_project 10 24862141 25026192 + MGP_129S1SvImJ_P0024854 Arhgap18 protein_coding protein_coding MGP_129S1SvImJ_T0024855.1 MGP_129S1SvImJ_G0017104.1 mouse_genomes_project 10 24919233 24948678 + MGP_129S1SvImJ_P0024855 Arhgap18 protein_coding protein_coding MGP_129S1SvImJ_T0024856.1 MGP_129S1SvImJ_G0017104.1 mouse_genomes_project 10 24963761 25026002 + Arhgap18 protein_coding processed_transcript MGP_129S1SvImJ_T0024542.1 MGP_129S1SvImJ_G0017004.1 mouse_genomes_project 10 5995765 6170353 - MGP_129S1SvImJ_P0024542 Sash1 protein_coding protein_coding MGP_129S1SvImJ_T0024543.1 MGP_129S1SvImJ_G0017004.1 mouse_genomes_project 10 6000158 6170141 - MGP_129S1SvImJ_P0024543 Sash1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0003049.1 MGP_129S1SvImJ_G0002853.1 mouse_genomes_project 10 41901769 41903197 + Gm29245 antisense antisense MGP_129S1SvImJ_T0025200.1 MGP_129S1SvImJ_G0017229.1 mouse_genomes_project 10 52518369 52526683 + MGP_129S1SvImJ_P0025200 Pln protein_coding protein_coding MGP_129S1SvImJ_T0025201.1 MGP_129S1SvImJ_G0017229.1 mouse_genomes_project 10 52518369 52526683 + MGP_129S1SvImJ_P0025201 Pln protein_coding protein_coding MGP_129S1SvImJ_T0026790.1 MGP_129S1SvImJ_G0017636.1 mouse_genomes_project 10 90621148 90678678 - MGP_129S1SvImJ_P0026790 Nr1h4 protein_coding protein_coding MGP_129S1SvImJ_T0026791.1 MGP_129S1SvImJ_G0017636.1 mouse_genomes_project 10 90621148 90678669 - MGP_129S1SvImJ_P0026791 Nr1h4 protein_coding protein_coding MGP_129S1SvImJ_T0026792.1 MGP_129S1SvImJ_G0017636.1 mouse_genomes_project 10 90621287 90710067 - MGP_129S1SvImJ_P0026792 Nr1h4 protein_coding protein_coding MGP_129S1SvImJ_T0024519.1 MGP_129S1SvImJ_G0016998.1 mouse_genomes_project 10 4951061 4989002 + MGP_129S1SvImJ_P0024519 Katna1 protein_coding protein_coding MGP_129S1SvImJ_T0024520.1 MGP_129S1SvImJ_G0016998.1 mouse_genomes_project 10 4951061 4989003 + MGP_129S1SvImJ_P0024520 Katna1 protein_coding protein_coding MGP_129S1SvImJ_T0024521.1 MGP_129S1SvImJ_G0016998.1 mouse_genomes_project 10 4951069 4978840 + MGP_129S1SvImJ_P0024521 Katna1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024522.1 MGP_129S1SvImJ_G0016998.1 mouse_genomes_project 10 4974965 4986091 + Katna1 protein_coding retained_intron MGP_129S1SvImJ_T0024523.1 MGP_129S1SvImJ_G0016998.1 mouse_genomes_project 10 4985629 4988917 + MGP_129S1SvImJ_P0024523 Katna1 protein_coding protein_coding MGP_129S1SvImJ_T0024524.1 MGP_129S1SvImJ_G0016998.1 mouse_genomes_project 10 4987086 4989001 + MGP_129S1SvImJ_P0024524 Katna1 protein_coding protein_coding MGP_129S1SvImJ_T0026433.1 MGP_129S1SvImJ_G0017549.1 mouse_genomes_project 10 82004035 82032364 + MGP_129S1SvImJ_P0026433 Pip5k1c protein_coding protein_coding MGP_129S1SvImJ_T0026434.1 MGP_129S1SvImJ_G0017549.1 mouse_genomes_project 10 82004052 82030646 + MGP_129S1SvImJ_P0026434 Pip5k1c protein_coding protein_coding MGP_129S1SvImJ_T0026435.1 MGP_129S1SvImJ_G0017549.1 mouse_genomes_project 10 82004060 82021522 + MGP_129S1SvImJ_P0026435 Pip5k1c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026436.1 MGP_129S1SvImJ_G0017549.1 mouse_genomes_project 10 82004076 82032364 + MGP_129S1SvImJ_P0026436 Pip5k1c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026437.1 MGP_129S1SvImJ_G0017549.1 mouse_genomes_project 10 82004077 82032365 + MGP_129S1SvImJ_P0026437 Pip5k1c protein_coding protein_coding MGP_129S1SvImJ_T0026438.1 MGP_129S1SvImJ_G0017549.1 mouse_genomes_project 10 82023079 82025832 + MGP_129S1SvImJ_P0026438 Pip5k1c protein_coding protein_coding MGP_129S1SvImJ_T0026439.1 MGP_129S1SvImJ_G0017549.1 mouse_genomes_project 10 82025754 82030537 + MGP_129S1SvImJ_P0026439 Pip5k1c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026440.1 MGP_129S1SvImJ_G0017549.1 mouse_genomes_project 10 82025889 82030412 + MGP_129S1SvImJ_P0026440 Pip5k1c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026441.1 MGP_129S1SvImJ_G0017549.1 mouse_genomes_project 10 82026379 82028174 + Pip5k1c protein_coding retained_intron MGP_129S1SvImJ_T0026442.1 MGP_129S1SvImJ_G0017549.1 mouse_genomes_project 10 82029233 82030405 + Pip5k1c protein_coding retained_intron MGP_129S1SvImJ_T0012444.1 MGP_129S1SvImJ_G0010533.1 mouse_genomes_project 10 76147416 76147809 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0026752.1 MGP_129S1SvImJ_G0017628.1 mouse_genomes_project 10 89545439 89561952 + MGP_129S1SvImJ_P0026752 Sycp3 protein_coding protein_coding MGP_129S1SvImJ_T0026753.1 MGP_129S1SvImJ_G0017628.1 mouse_genomes_project 10 89545534 89561953 + MGP_129S1SvImJ_P0026753 Sycp3 protein_coding protein_coding MGP_129S1SvImJ_T0026754.1 MGP_129S1SvImJ_G0017628.1 mouse_genomes_project 10 89545534 89561953 + MGP_129S1SvImJ_P0026754 Sycp3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0100430.1 MGP_129S1SvImJ_G0038497.1 mouse_genomes_project 10 44160148 44160277 - Gm26016 snoRNA snoRNA MGP_129S1SvImJ_T0026429.1 MGP_129S1SvImJ_G0017546.1 mouse_genomes_project 10 81972343 81974565 - MGP_129S1SvImJ_P0026429 Mrpl54 protein_coding protein_coding MGP_129S1SvImJ_T0026430.1 MGP_129S1SvImJ_G0017546.1 mouse_genomes_project 10 81973060 81974555 - Mrpl54 protein_coding retained_intron MGP_129S1SvImJ_T0027056.1 MGP_129S1SvImJ_G0017715.1 mouse_genomes_project 10 111988051 112331116 - MGP_129S1SvImJ_P0027056 Nav3 protein_coding protein_coding MGP_129S1SvImJ_T0027057.1 MGP_129S1SvImJ_G0017715.1 mouse_genomes_project 10 111988051 112141638 - MGP_129S1SvImJ_P0027057 Nav3 protein_coding protein_coding MGP_129S1SvImJ_T0027058.1 MGP_129S1SvImJ_G0017715.1 mouse_genomes_project 10 112025414 112034892 - Nav3 protein_coding processed_transcript MGP_129S1SvImJ_T0027059.1 MGP_129S1SvImJ_G0017715.1 mouse_genomes_project 10 112066790 112079044 - MGP_129S1SvImJ_P0027059 Nav3 protein_coding protein_coding MGP_129S1SvImJ_T0027060.1 MGP_129S1SvImJ_G0017715.1 mouse_genomes_project 10 112203435 112227380 - Nav3 protein_coding retained_intron MGP_129S1SvImJ_T0027061.1 MGP_129S1SvImJ_G0017715.1 mouse_genomes_project 10 112222450 112803118 - Nav3 protein_coding retained_intron MGP_129S1SvImJ_T0024868.1 MGP_129S1SvImJ_G0017107.1 mouse_genomes_project 10 26807923 27043541 + MGP_129S1SvImJ_P0024868 Themis protein_coding protein_coding MGP_129S1SvImJ_T0024869.1 MGP_129S1SvImJ_G0017107.1 mouse_genomes_project 10 26807923 26940356 + MGP_129S1SvImJ_P0024869 Themis protein_coding protein_coding MGP_129S1SvImJ_T0024870.1 MGP_129S1SvImJ_G0017107.1 mouse_genomes_project 10 26807958 26914004 + Themis protein_coding retained_intron MGP_129S1SvImJ_T0024871.1 MGP_129S1SvImJ_G0017107.1 mouse_genomes_project 10 26807960 26948247 + MGP_129S1SvImJ_P0024871 Themis protein_coding protein_coding MGP_129S1SvImJ_T0024872.1 MGP_129S1SvImJ_G0017107.1 mouse_genomes_project 10 26808190 27043544 + MGP_129S1SvImJ_P0024872 Themis protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024873.1 MGP_129S1SvImJ_G0017107.1 mouse_genomes_project 10 26808196 26884838 + MGP_129S1SvImJ_P0024873 Themis protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024874.1 MGP_129S1SvImJ_G0017107.1 mouse_genomes_project 10 26808196 26932536 + MGP_129S1SvImJ_P0024874 Themis protein_coding protein_coding MGP_129S1SvImJ_T0026911.1 MGP_129S1SvImJ_G0017659.1 mouse_genomes_project 10 95384692 95420291 - MGP_129S1SvImJ_P0026911 Vezt protein_coding protein_coding MGP_129S1SvImJ_T0026912.1 MGP_129S1SvImJ_G0017659.1 mouse_genomes_project 10 95407343 95486796 - MGP_129S1SvImJ_P0026912 Vezt protein_coding protein_coding MGP_129S1SvImJ_T0026913.1 MGP_129S1SvImJ_G0017659.1 mouse_genomes_project 10 95413926 95486727 - MGP_129S1SvImJ_P0026913 Vezt protein_coding protein_coding MGP_129S1SvImJ_T0026914.1 MGP_129S1SvImJ_G0017659.1 mouse_genomes_project 10 95417100 95486684 - MGP_129S1SvImJ_P0026914 Vezt protein_coding protein_coding MGP_129S1SvImJ_T0026915.1 MGP_129S1SvImJ_G0017659.1 mouse_genomes_project 10 95417557 95486721 - MGP_129S1SvImJ_P0026915 Vezt protein_coding protein_coding MGP_129S1SvImJ_T0026916.1 MGP_129S1SvImJ_G0017659.1 mouse_genomes_project 10 95433401 95445927 - MGP_129S1SvImJ_P0026916 Vezt protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026917.1 MGP_129S1SvImJ_G0017659.1 mouse_genomes_project 10 95436096 95486756 - MGP_129S1SvImJ_P0026917 Vezt protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026918.1 MGP_129S1SvImJ_G0017659.1 mouse_genomes_project 10 95442467 95486780 - MGP_129S1SvImJ_P0026918 Vezt protein_coding protein_coding MGP_129S1SvImJ_T0026919.1 MGP_129S1SvImJ_G0017659.1 mouse_genomes_project 10 95445863 95470122 - MGP_129S1SvImJ_P0026919 Vezt protein_coding protein_coding MGP_129S1SvImJ_T0026920.1 MGP_129S1SvImJ_G0017659.1 mouse_genomes_project 10 95450724 95486728 - Vezt protein_coding retained_intron MGP_129S1SvImJ_T0026921.1 MGP_129S1SvImJ_G0017659.1 mouse_genomes_project 10 95452902 95486646 - Vezt protein_coding processed_transcript MGP_129S1SvImJ_T0027415.1 MGP_129S1SvImJ_G0017834.1 mouse_genomes_project 10 131379055 131383512 - MGP_129S1SvImJ_P0027415 Gpr182 protein_coding protein_coding MGP_129S1SvImJ_T0099201.1 MGP_129S1SvImJ_G0037268.1 mouse_genomes_project 10 93845802 93845864 + Gm25884 snRNA snRNA MGP_129S1SvImJ_T0027605.1 MGP_129S1SvImJ_G0017922.1 mouse_genomes_project 10 133557024 133557981 - MGP_129S1SvImJ_P0027605 Olfr801 protein_coding protein_coding MGP_129S1SvImJ_T0027608.1 MGP_129S1SvImJ_G0017922.1 mouse_genomes_project 10 133557581 133561304 - MGP_129S1SvImJ_P0027608 Olfr801 protein_coding protein_coding MGP_129S1SvImJ_T0027610.1 MGP_129S1SvImJ_G0017922.1 mouse_genomes_project 10 133559695 133561276 - Olfr801 protein_coding processed_transcript MGP_129S1SvImJ_T0003107.1 MGP_129S1SvImJ_G0002897.1 mouse_genomes_project 10 117420270 117448191 + 4930473D10Rik antisense antisense MGP_129S1SvImJ_T0003038.1 MGP_129S1SvImJ_G0002846.1 mouse_genomes_project 10 31937977 31965045 + Gm15939 antisense antisense MGP_129S1SvImJ_T0026606.1 MGP_129S1SvImJ_G0017584.1 mouse_genomes_project 10 84014546 84126206 - MGP_129S1SvImJ_P0026606 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0026607.1 MGP_129S1SvImJ_G0017584.1 mouse_genomes_project 10 84097270 84100628 - protein_coding processed_transcript MGP_129S1SvImJ_T0026608.1 MGP_129S1SvImJ_G0017584.1 mouse_genomes_project 10 84114787 84122119 - MGP_129S1SvImJ_P0026608 protein_coding protein_coding MGP_129S1SvImJ_T0026609.1 MGP_129S1SvImJ_G0017584.1 mouse_genomes_project 10 84114914 84138021 - MGP_129S1SvImJ_P0026609 protein_coding protein_coding MGP_129S1SvImJ_T0026610.1 MGP_129S1SvImJ_G0017584.1 mouse_genomes_project 10 84115144 84136053 - MGP_129S1SvImJ_P0026610 protein_coding protein_coding MGP_129S1SvImJ_T0027177.1 MGP_129S1SvImJ_G0017761.1 mouse_genomes_project 10 120636917 120662030 - MGP_129S1SvImJ_P0027177 Mdm2 protein_coding protein_coding MGP_129S1SvImJ_T0027178.1 MGP_129S1SvImJ_G0017761.1 mouse_genomes_project 10 120636917 120662030 - MGP_129S1SvImJ_P0027178 Mdm2 protein_coding protein_coding MGP_129S1SvImJ_T0027179.1 MGP_129S1SvImJ_G0017761.1 mouse_genomes_project 10 120636924 120661294 - MGP_129S1SvImJ_P0027179 Mdm2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027180.1 MGP_129S1SvImJ_G0017761.1 mouse_genomes_project 10 120638138 120661957 - Mdm2 protein_coding retained_intron MGP_129S1SvImJ_T0027181.1 MGP_129S1SvImJ_G0017761.1 mouse_genomes_project 10 120638272 120639550 - Mdm2 protein_coding retained_intron MGP_129S1SvImJ_T0027182.1 MGP_129S1SvImJ_G0017761.1 mouse_genomes_project 10 120646044 120661350 - Mdm2 protein_coding processed_transcript MGP_129S1SvImJ_T0027183.1 MGP_129S1SvImJ_G0017761.1 mouse_genomes_project 10 120647312 120661983 - Mdm2 protein_coding processed_transcript MGP_129S1SvImJ_T0027184.1 MGP_129S1SvImJ_G0017761.1 mouse_genomes_project 10 120653530 120661564 - Mdm2 protein_coding processed_transcript MGP_129S1SvImJ_T0027185.1 MGP_129S1SvImJ_G0017761.1 mouse_genomes_project 10 120660989 120661986 - Mdm2 protein_coding retained_intron MGP_129S1SvImJ_T0000854.1 MGP_129S1SvImJ_G0000787.1 mouse_genomes_project 10 112372641 112372933 - TEC TEC MGP_129S1SvImJ_T0024970.1 MGP_129S1SvImJ_G0017149.1 mouse_genomes_project 10 37623651 37641862 + MGP_129S1SvImJ_P0024970 Tube1 protein_coding protein_coding MGP_129S1SvImJ_T0025015.1 MGP_129S1SvImJ_G0017164.1 mouse_genomes_project 10 39158513 39197385 + MGP_129S1SvImJ_P0025015 Slc22a16 protein_coding protein_coding MGP_129S1SvImJ_T0025016.1 MGP_129S1SvImJ_G0017164.1 mouse_genomes_project 10 39158790 39197381 + MGP_129S1SvImJ_P0025016 Slc22a16 protein_coding protein_coding MGP_129S1SvImJ_T0025811.1 MGP_129S1SvImJ_G0017375.1 mouse_genomes_project 10 76245300 76255139 + MGP_129S1SvImJ_P0025811 Zfp280b protein_coding protein_coding MGP_129S1SvImJ_T0024497.1 MGP_129S1SvImJ_G0016993.1 mouse_genomes_project 10 4641952 4654737 - MGP_129S1SvImJ_P0024497 Ulbp1 protein_coding protein_coding MGP_129S1SvImJ_T0026512.1 MGP_129S1SvImJ_G0017565.1 mouse_genomes_project 10 82290892 82298111 + MGP_129S1SvImJ_P0026512 Aes protein_coding protein_coding MGP_129S1SvImJ_T0026961.1 MGP_129S1SvImJ_G0017676.1 mouse_genomes_project 10 99299282 99306481 + MGP_129S1SvImJ_P0026961 Lum protein_coding protein_coding MGP_129S1SvImJ_T0025246.1 MGP_129S1SvImJ_G0017245.1 mouse_genomes_project 10 57340876 57394996 + MGP_129S1SvImJ_P0025246 Gcc2 protein_coding protein_coding MGP_129S1SvImJ_T0025247.1 MGP_129S1SvImJ_G0017245.1 mouse_genomes_project 10 57340892 57356197 + MGP_129S1SvImJ_P0025247 Gcc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025248.1 MGP_129S1SvImJ_G0017245.1 mouse_genomes_project 10 57340914 57394638 + MGP_129S1SvImJ_P0025248 Gcc2 protein_coding protein_coding MGP_129S1SvImJ_T0025249.1 MGP_129S1SvImJ_G0017245.1 mouse_genomes_project 10 57341097 57356069 + MGP_129S1SvImJ_P0025249 Gcc2 protein_coding protein_coding MGP_129S1SvImJ_T0025250.1 MGP_129S1SvImJ_G0017245.1 mouse_genomes_project 10 57341275 57354780 + Gcc2 protein_coding processed_transcript MGP_129S1SvImJ_T0025251.1 MGP_129S1SvImJ_G0017245.1 mouse_genomes_project 10 57360179 57364740 + Gcc2 protein_coding retained_intron MGP_129S1SvImJ_T0025252.1 MGP_129S1SvImJ_G0017245.1 mouse_genomes_project 10 57361690 57370873 + MGP_129S1SvImJ_P0025252 Gcc2 protein_coding protein_coding MGP_129S1SvImJ_T0025253.1 MGP_129S1SvImJ_G0017245.1 mouse_genomes_project 10 57375332 57382176 + Gcc2 protein_coding retained_intron MGP_129S1SvImJ_T0025254.1 MGP_129S1SvImJ_G0017245.1 mouse_genomes_project 10 57387817 57394985 + Gcc2 protein_coding retained_intron MGP_129S1SvImJ_T0027606.1 MGP_129S1SvImJ_G0017923.1 mouse_genomes_project 10 133557083 133557981 - MGP_129S1SvImJ_P0027606 Olfr805 protein_coding protein_coding MGP_129S1SvImJ_T0027607.1 MGP_129S1SvImJ_G0017923.1 mouse_genomes_project 10 133557083 133634511 - MGP_129S1SvImJ_P0027607 Olfr805 protein_coding protein_coding MGP_129S1SvImJ_T0027609.1 MGP_129S1SvImJ_G0017923.1 mouse_genomes_project 10 133557839 133618499 - MGP_129S1SvImJ_P0027609 Olfr805 protein_coding protein_coding MGP_129S1SvImJ_T0026612.1 MGP_129S1SvImJ_G0017586.1 mouse_genomes_project 10 84302193 84344882 - MGP_129S1SvImJ_P0026612 Aldh1l2 protein_coding protein_coding MGP_129S1SvImJ_T0026613.1 MGP_129S1SvImJ_G0017586.1 mouse_genomes_project 10 84304951 84307632 - Aldh1l2 protein_coding processed_transcript MGP_129S1SvImJ_T0026614.1 MGP_129S1SvImJ_G0017586.1 mouse_genomes_project 10 84306354 84309083 - Aldh1l2 protein_coding processed_transcript MGP_129S1SvImJ_T0026615.1 MGP_129S1SvImJ_G0017586.1 mouse_genomes_project 10 84306356 84344949 - Aldh1l2 protein_coding retained_intron MGP_129S1SvImJ_T0026616.1 MGP_129S1SvImJ_G0017586.1 mouse_genomes_project 10 84311378 84319561 - Aldh1l2 protein_coding processed_transcript MGP_129S1SvImJ_T0026617.1 MGP_129S1SvImJ_G0017586.1 mouse_genomes_project 10 84315541 84325215 - Aldh1l2 protein_coding processed_transcript MGP_129S1SvImJ_T0027581.1 MGP_129S1SvImJ_G0017904.1 mouse_genomes_project 10 133116001 133338697 + MGP_129S1SvImJ_P0027581 protein_coding protein_coding MGP_129S1SvImJ_T0024589.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10454065 10522433 + MGP_129S1SvImJ_P0024589 Plagl1 protein_coding protein_coding MGP_129S1SvImJ_T0024590.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484412 10519939 + Plagl1 protein_coding processed_transcript MGP_129S1SvImJ_T0024591.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484433 10520094 + Plagl1 protein_coding processed_transcript MGP_129S1SvImJ_T0024592.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484509 10519978 + Plagl1 protein_coding processed_transcript MGP_129S1SvImJ_T0024593.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484509 10526599 + MGP_129S1SvImJ_P0024593 Plagl1 protein_coding protein_coding MGP_129S1SvImJ_T0024594.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484553 10507746 + Plagl1 protein_coding processed_transcript MGP_129S1SvImJ_T0024595.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484553 10510261 + Plagl1 protein_coding processed_transcript MGP_129S1SvImJ_T0024596.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484553 10510320 + Plagl1 protein_coding processed_transcript MGP_129S1SvImJ_T0024597.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484553 10510243 + Plagl1 protein_coding processed_transcript MGP_129S1SvImJ_T0024598.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484553 10510303 + Plagl1 protein_coding processed_transcript MGP_129S1SvImJ_T0024599.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484553 10520059 + Plagl1 protein_coding processed_transcript MGP_129S1SvImJ_T0024600.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484553 10502603 + Plagl1 protein_coding processed_transcript MGP_129S1SvImJ_T0024601.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484553 10510259 + Plagl1 protein_coding processed_transcript MGP_129S1SvImJ_T0024602.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484553 10500075 + Plagl1 protein_coding retained_intron MGP_129S1SvImJ_T0024603.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484553 10519996 + Plagl1 protein_coding processed_transcript MGP_129S1SvImJ_T0024604.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484553 10519978 + Plagl1 protein_coding processed_transcript MGP_129S1SvImJ_T0024605.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484553 10506088 + Plagl1 protein_coding processed_transcript MGP_129S1SvImJ_T0024606.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484553 10526060 + MGP_129S1SvImJ_P0024606 Plagl1 protein_coding protein_coding MGP_129S1SvImJ_T0024607.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484556 10526047 + MGP_129S1SvImJ_P0024607 Plagl1 protein_coding protein_coding MGP_129S1SvImJ_T0024608.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484562 10506984 + Plagl1 protein_coding retained_intron MGP_129S1SvImJ_T0024609.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484595 10506324 + Plagl1 protein_coding retained_intron MGP_129S1SvImJ_T0024610.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484595 10506424 + Plagl1 protein_coding retained_intron MGP_129S1SvImJ_T0024611.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10484734 10520109 + MGP_129S1SvImJ_P0024611 Plagl1 protein_coding protein_coding MGP_129S1SvImJ_T0024612.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10507004 10522420 + MGP_129S1SvImJ_P0024612 Plagl1 protein_coding protein_coding MGP_129S1SvImJ_T0024613.1 MGP_129S1SvImJ_G0017018.1 mouse_genomes_project 10 10509902 10520146 + MGP_129S1SvImJ_P0024613 Plagl1 protein_coding protein_coding MGP_129S1SvImJ_T0026003.1 MGP_129S1SvImJ_G0017430.1 mouse_genomes_project 10 79245927 79274874 + MGP_129S1SvImJ_P0026003 Slc1a6 protein_coding protein_coding MGP_129S1SvImJ_T0102113.1 MGP_129S1SvImJ_G0039948.1 mouse_genomes_project 10 107320230 107320389 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0003086.1 MGP_129S1SvImJ_G0002883.1 mouse_genomes_project 10 82826649 82851500 + Gm15608 antisense antisense MGP_129S1SvImJ_T0003087.1 MGP_129S1SvImJ_G0002883.1 mouse_genomes_project 10 82833730 82851481 + Gm15608 antisense antisense MGP_129S1SvImJ_T0025736.1 MGP_129S1SvImJ_G0017353.1 mouse_genomes_project 10 75473512 75493349 + MGP_129S1SvImJ_P0025736 Adora2a protein_coding protein_coding MGP_129S1SvImJ_T0027635.1 MGP_129S1SvImJ_G0017942.1 mouse_genomes_project 10 133965000 133966061 + MGP_129S1SvImJ_P0027635 Olfr820 protein_coding protein_coding MGP_129S1SvImJ_T0099187.1 MGP_129S1SvImJ_G0037254.1 mouse_genomes_project 10 75787552 75787665 - Gm26402 snRNA snRNA MGP_129S1SvImJ_T0026973.1 MGP_129S1SvImJ_G0017684.1 mouse_genomes_project 10 100913964 100919053 + MGP_129S1SvImJ_P0026973 Galnt4 protein_coding protein_coding MGP_129S1SvImJ_T0027290.1 MGP_129S1SvImJ_G0017798.1 mouse_genomes_project 10 130572527 130594341 + MGP_129S1SvImJ_P0027290 Avil protein_coding protein_coding MGP_129S1SvImJ_T0027291.1 MGP_129S1SvImJ_G0017798.1 mouse_genomes_project 10 130572557 130578137 + MGP_129S1SvImJ_P0027291 Avil protein_coding protein_coding MGP_129S1SvImJ_T0027292.1 MGP_129S1SvImJ_G0017798.1 mouse_genomes_project 10 130574819 130578209 + MGP_129S1SvImJ_P0027292 Avil protein_coding protein_coding MGP_129S1SvImJ_T0027293.1 MGP_129S1SvImJ_G0017798.1 mouse_genomes_project 10 130574953 130594125 + MGP_129S1SvImJ_P0027293 Avil protein_coding protein_coding MGP_129S1SvImJ_T0026970.1 MGP_129S1SvImJ_G0017683.1 mouse_genomes_project 10 100912841 101010847 + MGP_129S1SvImJ_P0026970 Poc1b protein_coding protein_coding MGP_129S1SvImJ_T0026971.1 MGP_129S1SvImJ_G0017683.1 mouse_genomes_project 10 100912887 101009911 + MGP_129S1SvImJ_P0026971 Poc1b protein_coding protein_coding MGP_129S1SvImJ_T0026972.1 MGP_129S1SvImJ_G0017683.1 mouse_genomes_project 10 100912908 101010933 + MGP_129S1SvImJ_P0026972 Poc1b protein_coding protein_coding MGP_129S1SvImJ_T0026975.1 MGP_129S1SvImJ_G0017683.1 mouse_genomes_project 10 100936645 101005662 + MGP_129S1SvImJ_P0026975 Poc1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026976.1 MGP_129S1SvImJ_G0017683.1 mouse_genomes_project 10 100981960 101009887 + Poc1b protein_coding processed_transcript MGP_129S1SvImJ_T0026977.1 MGP_129S1SvImJ_G0017683.1 mouse_genomes_project 10 101005764 101009709 + Poc1b protein_coding processed_transcript MGP_129S1SvImJ_T0012400.1 MGP_129S1SvImJ_G0010489.1 mouse_genomes_project 10 948019 948463 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0025813.1 MGP_129S1SvImJ_G0017377.1 mouse_genomes_project 10 76369988 76413751 + MGP_129S1SvImJ_P0025813 Slc5a4a protein_coding protein_coding MGP_129S1SvImJ_T0003051.1 MGP_129S1SvImJ_G0002855.1 mouse_genomes_project 10 44180971 44182935 - Gm15934 antisense antisense MGP_129S1SvImJ_T0027424.1 MGP_129S1SvImJ_G0017840.1 mouse_genomes_project 10 131512636 131529270 + MGP_129S1SvImJ_P0027424 BC089597 protein_coding protein_coding MGP_129S1SvImJ_T0026988.1 MGP_129S1SvImJ_G0017691.1 mouse_genomes_project 10 102353270 102443131 + MGP_129S1SvImJ_P0026988 Cep290 protein_coding protein_coding MGP_129S1SvImJ_T0012452.1 MGP_129S1SvImJ_G0010541.1 mouse_genomes_project 10 98128729 98129638 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024788.1 MGP_129S1SvImJ_G0017073.1 mouse_genomes_project 10 21719609 21751625 + MGP_129S1SvImJ_P0024788 Slc18b1 protein_coding protein_coding MGP_129S1SvImJ_T0024789.1 MGP_129S1SvImJ_G0017073.1 mouse_genomes_project 10 21719675 21728417 + MGP_129S1SvImJ_P0024789 Slc18b1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024790.1 MGP_129S1SvImJ_G0017073.1 mouse_genomes_project 10 21719823 21728369 + MGP_129S1SvImJ_P0024790 Slc18b1 protein_coding protein_coding MGP_129S1SvImJ_T0024791.1 MGP_129S1SvImJ_G0017073.1 mouse_genomes_project 10 21728433 21741989 + MGP_129S1SvImJ_P0024791 Slc18b1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024792.1 MGP_129S1SvImJ_G0017073.1 mouse_genomes_project 10 21748228 21750810 + Slc18b1 protein_coding retained_intron MGP_129S1SvImJ_T0024546.1 MGP_129S1SvImJ_G0017007.1 mouse_genomes_project 10 7096934 7245416 - MGP_129S1SvImJ_P0024546 Stxbp5 protein_coding protein_coding MGP_129S1SvImJ_T0024547.1 MGP_129S1SvImJ_G0017007.1 mouse_genomes_project 10 7101345 7245812 - MGP_129S1SvImJ_P0024547 Stxbp5 protein_coding protein_coding MGP_129S1SvImJ_T0024548.1 MGP_129S1SvImJ_G0017007.1 mouse_genomes_project 10 7101383 7139411 - Stxbp5 protein_coding processed_transcript MGP_129S1SvImJ_T0024549.1 MGP_129S1SvImJ_G0017007.1 mouse_genomes_project 10 7101968 7121716 - Stxbp5 protein_coding retained_intron MGP_129S1SvImJ_T0024550.1 MGP_129S1SvImJ_G0017007.1 mouse_genomes_project 10 7102300 7245416 - MGP_129S1SvImJ_P0024550 Stxbp5 protein_coding protein_coding MGP_129S1SvImJ_T0024551.1 MGP_129S1SvImJ_G0017007.1 mouse_genomes_project 10 7108497 7111920 - Stxbp5 protein_coding retained_intron MGP_129S1SvImJ_T0024552.1 MGP_129S1SvImJ_G0017007.1 mouse_genomes_project 10 7108500 7110347 - Stxbp5 protein_coding retained_intron MGP_129S1SvImJ_T0024553.1 MGP_129S1SvImJ_G0017007.1 mouse_genomes_project 10 7108607 7119697 - Stxbp5 protein_coding retained_intron MGP_129S1SvImJ_T0024554.1 MGP_129S1SvImJ_G0017007.1 mouse_genomes_project 10 7110835 7139571 - MGP_129S1SvImJ_P0024554 Stxbp5 protein_coding protein_coding MGP_129S1SvImJ_T0024555.1 MGP_129S1SvImJ_G0017007.1 mouse_genomes_project 10 7111001 7119697 - Stxbp5 protein_coding retained_intron MGP_129S1SvImJ_T0024556.1 MGP_129S1SvImJ_G0017007.1 mouse_genomes_project 10 7130423 7139542 - Stxbp5 protein_coding retained_intron MGP_129S1SvImJ_T0024952.1 MGP_129S1SvImJ_G0017146.1 mouse_genomes_project 10 37296201 37297440 - MGP_129S1SvImJ_P0024952 Rfpl4b protein_coding protein_coding MGP_129S1SvImJ_T0025853.1 MGP_129S1SvImJ_G0017389.1 mouse_genomes_project 10 76968469 76987940 - MGP_129S1SvImJ_P0025853 Col6a1 protein_coding protein_coding MGP_129S1SvImJ_T0025854.1 MGP_129S1SvImJ_G0017389.1 mouse_genomes_project 10 76974693 76978914 - Col6a1 protein_coding retained_intron MGP_129S1SvImJ_T0027282.1 MGP_129S1SvImJ_G0017793.1 mouse_genomes_project 10 126620390 127123281 + MGP_129S1SvImJ_P0027282 Fam19a2 protein_coding protein_coding MGP_129S1SvImJ_T0024810.1 MGP_129S1SvImJ_G0017091.1 mouse_genomes_project 10 22184219 22268630 + MGP_129S1SvImJ_P0024810 Moxd1 protein_coding protein_coding MGP_129S1SvImJ_T0024811.1 MGP_129S1SvImJ_G0017091.1 mouse_genomes_project 10 22184247 22196514 + Moxd1 protein_coding processed_transcript MGP_129S1SvImJ_T0099178.1 MGP_129S1SvImJ_G0037245.1 mouse_genomes_project 10 52061139 52061246 + Gm25664 snRNA snRNA MGP_129S1SvImJ_T0027196.1 MGP_129S1SvImJ_G0017768.1 mouse_genomes_project 10 121895686 121905238 - MGP_129S1SvImJ_P0027196 Dyrk2 protein_coding protein_coding MGP_129S1SvImJ_T0024831.1 MGP_129S1SvImJ_G0017096.1 mouse_genomes_project 10 22913587 22927899 - MGP_129S1SvImJ_P0024831 Arg1 protein_coding protein_coding MGP_129S1SvImJ_T0026114.1 MGP_129S1SvImJ_G0017466.1 mouse_genomes_project 10 80447426 80449324 + MGP_129S1SvImJ_P0026114 Elane protein_coding protein_coding MGP_129S1SvImJ_T0000365.1 MGP_129S1SvImJ_G0000307.1 mouse_genomes_project 10 85918111 85918179 + mt-Tp Mt_tRNA Mt_tRNA MGP_129S1SvImJ_T0009655.1 MGP_129S1SvImJ_G0007771.1 mouse_genomes_project 10 132200262 132200351 + Mir8105 miRNA miRNA MGP_129S1SvImJ_T0026123.1 MGP_129S1SvImJ_G0017469.1 mouse_genomes_project 10 80471028 80482118 - MGP_129S1SvImJ_P0026123 R3hdm4 protein_coding protein_coding MGP_129S1SvImJ_T0026124.1 MGP_129S1SvImJ_G0017469.1 mouse_genomes_project 10 80473631 80482194 - MGP_129S1SvImJ_P0026124 R3hdm4 protein_coding protein_coding MGP_129S1SvImJ_T0006119.1 MGP_129S1SvImJ_G0005125.1 mouse_genomes_project 10 65806256 65953359 - 1700023F02Rik lincRNA lincRNA MGP_129S1SvImJ_T0006120.1 MGP_129S1SvImJ_G0005125.1 mouse_genomes_project 10 65806256 65809702 - 1700023F02Rik lincRNA lincRNA MGP_129S1SvImJ_T0006121.1 MGP_129S1SvImJ_G0005125.1 mouse_genomes_project 10 65806260 65809723 - 1700023F02Rik lincRNA lincRNA MGP_129S1SvImJ_T0006122.1 MGP_129S1SvImJ_G0005125.1 mouse_genomes_project 10 65806260 65809716 - 1700023F02Rik lincRNA lincRNA MGP_129S1SvImJ_T0006123.1 MGP_129S1SvImJ_G0005125.1 mouse_genomes_project 10 65806327 65808728 - 1700023F02Rik lincRNA lincRNA MGP_129S1SvImJ_T0003118.1 MGP_129S1SvImJ_G0002904.1 mouse_genomes_project 10 122939828 122967938 - Grip1os1 antisense antisense MGP_129S1SvImJ_T0003119.1 MGP_129S1SvImJ_G0002904.1 mouse_genomes_project 10 122962722 122967825 - Grip1os1 antisense antisense MGP_129S1SvImJ_T0009643.1 MGP_129S1SvImJ_G0007759.1 mouse_genomes_project 10 125997696 125997797 + Mir8104 miRNA miRNA MGP_129S1SvImJ_T0027011.1 MGP_129S1SvImJ_G0017695.1 mouse_genomes_project 10 104463188 104471650 - MGP_129S1SvImJ_P0027011 Nts protein_coding protein_coding MGP_129S1SvImJ_T0025520.1 MGP_129S1SvImJ_G0017318.1 mouse_genomes_project 10 62962838 64606862 + MGP_129S1SvImJ_P0025520 Ctnna3 protein_coding protein_coding MGP_129S1SvImJ_T0025521.1 MGP_129S1SvImJ_G0017318.1 mouse_genomes_project 10 62991020 64607564 + MGP_129S1SvImJ_P0025521 Ctnna3 protein_coding protein_coding MGP_129S1SvImJ_T0025522.1 MGP_129S1SvImJ_G0017318.1 mouse_genomes_project 10 63040483 64606730 + MGP_129S1SvImJ_P0025522 Ctnna3 protein_coding protein_coding MGP_129S1SvImJ_T0025523.1 MGP_129S1SvImJ_G0017318.1 mouse_genomes_project 10 63114717 63125683 + Ctnna3 protein_coding processed_transcript MGP_129S1SvImJ_T0025524.1 MGP_129S1SvImJ_G0017318.1 mouse_genomes_project 10 63361748 63633131 + Ctnna3 protein_coding processed_transcript MGP_129S1SvImJ_T0100460.1 MGP_129S1SvImJ_G0038527.1 mouse_genomes_project 10 119105015 119105152 + Gm26495 snoRNA snoRNA MGP_129S1SvImJ_T0003093.1 MGP_129S1SvImJ_G0002888.1 mouse_genomes_project 10 87819754 87856457 + Gm16268 antisense antisense MGP_129S1SvImJ_T0012411.1 MGP_129S1SvImJ_G0010500.1 mouse_genomes_project 10 21988070 21988685 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0026369.1 MGP_129S1SvImJ_G0017532.1 mouse_genomes_project 10 81704865 81713748 - MGP_129S1SvImJ_P0026369 Slc39a3 protein_coding protein_coding MGP_129S1SvImJ_T0026370.1 MGP_129S1SvImJ_G0017532.1 mouse_genomes_project 10 81704867 81713630 - MGP_129S1SvImJ_P0026370 Slc39a3 protein_coding protein_coding MGP_129S1SvImJ_T0026371.1 MGP_129S1SvImJ_G0017532.1 mouse_genomes_project 10 81704868 81710234 - MGP_129S1SvImJ_P0026371 Slc39a3 protein_coding protein_coding MGP_129S1SvImJ_T0026372.1 MGP_129S1SvImJ_G0017532.1 mouse_genomes_project 10 81710178 81713604 - Slc39a3 protein_coding processed_transcript MGP_129S1SvImJ_T0026373.1 MGP_129S1SvImJ_G0017532.1 mouse_genomes_project 10 81710204 81713572 - Slc39a3 protein_coding processed_transcript MGP_129S1SvImJ_T0027432.1 MGP_129S1SvImJ_G0017844.1 mouse_genomes_project 10 131682192 131702287 + MGP_129S1SvImJ_P0027432 Prim1 protein_coding protein_coding MGP_129S1SvImJ_T0027433.1 MGP_129S1SvImJ_G0017844.1 mouse_genomes_project 10 131682196 131702341 + MGP_129S1SvImJ_P0027433 Prim1 protein_coding protein_coding MGP_129S1SvImJ_T0027434.1 MGP_129S1SvImJ_G0017844.1 mouse_genomes_project 10 131682220 131702169 + Prim1 protein_coding retained_intron MGP_129S1SvImJ_T0027435.1 MGP_129S1SvImJ_G0017844.1 mouse_genomes_project 10 131689029 131691193 + Prim1 protein_coding retained_intron MGP_129S1SvImJ_T0027436.1 MGP_129S1SvImJ_G0017844.1 mouse_genomes_project 10 131698990 131702337 + Prim1 protein_coding retained_intron MGP_129S1SvImJ_T0026945.1 MGP_129S1SvImJ_G0017668.1 mouse_genomes_project 10 96937500 96968572 - MGP_129S1SvImJ_P0026945 Gm9847 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026946.1 MGP_129S1SvImJ_G0017668.1 mouse_genomes_project 10 96939805 96945097 - Gm9847 protein_coding retained_intron MGP_129S1SvImJ_T0026947.1 MGP_129S1SvImJ_G0017668.1 mouse_genomes_project 10 96940486 96968232 - Gm9847 protein_coding processed_transcript MGP_129S1SvImJ_T0026948.1 MGP_129S1SvImJ_G0017668.1 mouse_genomes_project 10 96953405 96968492 - Gm9847 protein_coding processed_transcript MGP_129S1SvImJ_T0026949.1 MGP_129S1SvImJ_G0017668.1 mouse_genomes_project 10 96967810 96971917 - Gm9847 protein_coding processed_transcript MGP_129S1SvImJ_T0026950.1 MGP_129S1SvImJ_G0017668.1 mouse_genomes_project 10 96968007 96972373 - MGP_129S1SvImJ_P0026950 Gm9847 protein_coding protein_coding MGP_129S1SvImJ_T0026951.1 MGP_129S1SvImJ_G0017668.1 mouse_genomes_project 10 96970597 96973758 - Gm9847 protein_coding processed_transcript MGP_129S1SvImJ_T0026952.1 MGP_129S1SvImJ_G0017668.1 mouse_genomes_project 10 96972180 96973089 - Gm9847 protein_coding processed_transcript MGP_129S1SvImJ_T0099214.1 MGP_129S1SvImJ_G0037281.1 mouse_genomes_project 10 126794222 126794406 + Gm22958 snRNA snRNA MGP_129S1SvImJ_T0011292.1 MGP_129S1SvImJ_G0009408.1 mouse_genomes_project 10 62401215 62401498 + Gm22803 misc_RNA misc_RNA MGP_129S1SvImJ_T0024891.1 MGP_129S1SvImJ_G0017114.1 mouse_genomes_project 10 27632549 27717411 - MGP_129S1SvImJ_P0024891 Rspo3 protein_coding protein_coding MGP_129S1SvImJ_T0025794.1 MGP_129S1SvImJ_G0017369.1 mouse_genomes_project 10 76095710 76098254 + MGP_129S1SvImJ_P0025794 Derl3 protein_coding protein_coding MGP_129S1SvImJ_T0003122.1 MGP_129S1SvImJ_G0002907.1 mouse_genomes_project 10 125078934 125080300 + C030027H14Rik antisense antisense MGP_129S1SvImJ_T0026686.1 MGP_129S1SvImJ_G0017610.1 mouse_genomes_project 10 87258831 87309693 + MGP_129S1SvImJ_P0026686 Timp3 protein_coding protein_coding MGP_129S1SvImJ_T0026687.1 MGP_129S1SvImJ_G0017610.1 mouse_genomes_project 10 87259013 87265227 + Timp3 protein_coding processed_transcript MGP_129S1SvImJ_T0026688.1 MGP_129S1SvImJ_G0017610.1 mouse_genomes_project 10 87259015 87287036 + Timp3 protein_coding processed_transcript MGP_129S1SvImJ_T0026689.1 MGP_129S1SvImJ_G0017610.1 mouse_genomes_project 10 87261313 87304172 + MGP_129S1SvImJ_P0026689 Timp3 protein_coding protein_coding MGP_129S1SvImJ_T0000857.1 MGP_129S1SvImJ_G0000790.1 mouse_genomes_project 10 116990030 116990345 + TEC TEC MGP_129S1SvImJ_T0027546.1 MGP_129S1SvImJ_G0017884.1 mouse_genomes_project 10 132600216 132611719 + MGP_129S1SvImJ_P0027546 Dnajc14 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0099195.1 MGP_129S1SvImJ_G0037262.1 mouse_genomes_project 10 86985031 86985135 - Gm24430 snRNA snRNA MGP_129S1SvImJ_T0025806.1 MGP_129S1SvImJ_G0017372.1 mouse_genomes_project 10 76137925 76140078 + MGP_129S1SvImJ_P0025806 Chchd10 protein_coding protein_coding MGP_129S1SvImJ_T0099188.1 MGP_129S1SvImJ_G0037255.1 mouse_genomes_project 10 80245589 80245696 - Gm25794 snRNA snRNA MGP_129S1SvImJ_T0000862.1 MGP_129S1SvImJ_G0000795.1 mouse_genomes_project 10 123918810 123919884 + TEC TEC MGP_129S1SvImJ_T0024740.1 MGP_129S1SvImJ_G0017056.1 mouse_genomes_project 10 18145586 18496411 - MGP_129S1SvImJ_P0024740 Pde7b protein_coding protein_coding MGP_129S1SvImJ_T0024741.1 MGP_129S1SvImJ_G0017056.1 mouse_genomes_project 10 18146510 18308124 - MGP_129S1SvImJ_P0024741 Pde7b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024742.1 MGP_129S1SvImJ_G0017056.1 mouse_genomes_project 10 18148000 18496029 - MGP_129S1SvImJ_P0024742 Pde7b protein_coding protein_coding MGP_129S1SvImJ_T0024743.1 MGP_129S1SvImJ_G0017056.1 mouse_genomes_project 10 18148000 18308124 - MGP_129S1SvImJ_P0024743 Pde7b protein_coding protein_coding MGP_129S1SvImJ_T0024744.1 MGP_129S1SvImJ_G0017056.1 mouse_genomes_project 10 18155967 18308266 - MGP_129S1SvImJ_P0024744 Pde7b protein_coding protein_coding MGP_129S1SvImJ_T0024745.1 MGP_129S1SvImJ_G0017056.1 mouse_genomes_project 10 18233370 18496365 - Pde7b protein_coding retained_intron MGP_129S1SvImJ_T0024746.1 MGP_129S1SvImJ_G0017056.1 mouse_genomes_project 10 18382445 18496365 - Pde7b protein_coding retained_intron MGP_129S1SvImJ_T0025018.1 MGP_129S1SvImJ_G0017166.1 mouse_genomes_project 10 39288166 39423748 + MGP_129S1SvImJ_P0025018 Mettl24 protein_coding protein_coding MGP_129S1SvImJ_T0026297.1 MGP_129S1SvImJ_G0017506.1 mouse_genomes_project 10 81164459 81189502 - MGP_129S1SvImJ_P0026297 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0026298.1 MGP_129S1SvImJ_G0017506.1 mouse_genomes_project 10 81164465 81172746 - protein_coding retained_intron MGP_129S1SvImJ_T0026299.1 MGP_129S1SvImJ_G0017506.1 mouse_genomes_project 10 81165816 81173712 - protein_coding retained_intron MGP_129S1SvImJ_T0026300.1 MGP_129S1SvImJ_G0017506.1 mouse_genomes_project 10 81165816 81173380 - protein_coding retained_intron MGP_129S1SvImJ_T0026301.1 MGP_129S1SvImJ_G0017506.1 mouse_genomes_project 10 81166159 81167857 - MGP_129S1SvImJ_P0026301 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026302.1 MGP_129S1SvImJ_G0017506.1 mouse_genomes_project 10 81172906 81176372 - MGP_129S1SvImJ_P0026302 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026303.1 MGP_129S1SvImJ_G0017506.1 mouse_genomes_project 10 81174236 81176370 - protein_coding processed_transcript MGP_129S1SvImJ_T0026928.1 MGP_129S1SvImJ_G0017662.1 mouse_genomes_project 10 95669233 95693645 + MGP_129S1SvImJ_P0026928 Ndufa12 protein_coding protein_coding MGP_129S1SvImJ_T0026929.1 MGP_129S1SvImJ_G0017662.1 mouse_genomes_project 10 95669237 95673711 + Ndufa12 protein_coding retained_intron MGP_129S1SvImJ_T0026930.1 MGP_129S1SvImJ_G0017662.1 mouse_genomes_project 10 95670244 95692945 + MGP_129S1SvImJ_P0026930 Ndufa12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024812.1 MGP_129S1SvImJ_G0017092.1 mouse_genomes_project 10 22576347 22579586 + MGP_129S1SvImJ_P0024812 Ctgf protein_coding protein_coding MGP_129S1SvImJ_T0024813.1 MGP_129S1SvImJ_G0017092.1 mouse_genomes_project 10 22576631 22579589 + MGP_129S1SvImJ_P0024813 Ctgf protein_coding protein_coding MGP_129S1SvImJ_T0024814.1 MGP_129S1SvImJ_G0017092.1 mouse_genomes_project 10 22576685 22577278 + MGP_129S1SvImJ_P0024814 Ctgf protein_coding protein_coding MGP_129S1SvImJ_T0000836.1 MGP_129S1SvImJ_G0000770.1 mouse_genomes_project 10 11792078 11792904 + TEC TEC MGP_129S1SvImJ_T0026253.1 MGP_129S1SvImJ_G0017497.1 mouse_genomes_project 10 80930717 80937201 + MGP_129S1SvImJ_P0026253 Reep6 protein_coding protein_coding MGP_129S1SvImJ_T0026254.1 MGP_129S1SvImJ_G0017497.1 mouse_genomes_project 10 80930717 80937201 + MGP_129S1SvImJ_P0026254 Reep6 protein_coding protein_coding MGP_129S1SvImJ_T0026255.1 MGP_129S1SvImJ_G0017497.1 mouse_genomes_project 10 80930909 80937200 + MGP_129S1SvImJ_P0026255 Reep6 protein_coding protein_coding MGP_129S1SvImJ_T0026256.1 MGP_129S1SvImJ_G0017497.1 mouse_genomes_project 10 80930962 80935192 + Reep6 protein_coding retained_intron MGP_129S1SvImJ_T0026257.1 MGP_129S1SvImJ_G0017497.1 mouse_genomes_project 10 80930966 80936342 + MGP_129S1SvImJ_P0026257 Reep6 protein_coding protein_coding MGP_129S1SvImJ_T0026432.1 MGP_129S1SvImJ_G0017548.1 mouse_genomes_project 10 81980659 82002340 - MGP_129S1SvImJ_P0026432 Tjp3 protein_coding protein_coding MGP_129S1SvImJ_T0024755.1 MGP_129S1SvImJ_G0017061.1 mouse_genomes_project 10 19176822 19196053 + MGP_129S1SvImJ_P0024755 Aldh8a1 protein_coding protein_coding MGP_129S1SvImJ_T0024756.1 MGP_129S1SvImJ_G0017061.1 mouse_genomes_project 10 19176831 19184934 + Aldh8a1 protein_coding retained_intron MGP_129S1SvImJ_T0024757.1 MGP_129S1SvImJ_G0017061.1 mouse_genomes_project 10 19176878 19188336 + MGP_129S1SvImJ_P0024757 Aldh8a1 protein_coding protein_coding MGP_129S1SvImJ_T0026295.1 MGP_129S1SvImJ_G0017504.1 mouse_genomes_project 10 81108194 81135139 + MGP_129S1SvImJ_P0026295 Onecut3 protein_coding protein_coding MGP_129S1SvImJ_T0026081.1 MGP_129S1SvImJ_G0017461.1 mouse_genomes_project 10 80338960 80371306 + MGP_129S1SvImJ_P0026081 Palm protein_coding protein_coding MGP_129S1SvImJ_T0026082.1 MGP_129S1SvImJ_G0017461.1 mouse_genomes_project 10 80338960 80371306 + MGP_129S1SvImJ_P0026082 Palm protein_coding protein_coding MGP_129S1SvImJ_T0098291.1 MGP_129S1SvImJ_G0036376.1 mouse_genomes_project 10 63569874 63570239 + pseudogene pseudogene MGP_129S1SvImJ_T0025353.1 MGP_129S1SvImJ_G0017273.1 mouse_genomes_project 10 60386223 60392676 + MGP_129S1SvImJ_P0025353 Pcbd1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0025850.1 MGP_129S1SvImJ_G0017388.1 mouse_genomes_project 10 76850727 76879074 - MGP_129S1SvImJ_P0025850 Col6a2 protein_coding protein_coding MGP_129S1SvImJ_T0025851.1 MGP_129S1SvImJ_G0017388.1 mouse_genomes_project 10 76852798 76878769 - MGP_129S1SvImJ_P0025851 Col6a2 protein_coding protein_coding MGP_129S1SvImJ_T0025852.1 MGP_129S1SvImJ_G0017388.1 mouse_genomes_project 10 76855974 76878769 - Col6a2 protein_coding retained_intron MGP_129S1SvImJ_T0027569.1 MGP_129S1SvImJ_G0017895.1 mouse_genomes_project 10 132867994 132875689 - MGP_129S1SvImJ_P0027569 protein_coding protein_coding MGP_129S1SvImJ_T0027568.1 MGP_129S1SvImJ_G0017894.1 mouse_genomes_project 10 132794282 132833521 + MGP_129S1SvImJ_P0027568 protein_coding protein_coding MGP_129S1SvImJ_T0009624.1 MGP_129S1SvImJ_G0007740.1 mouse_genomes_project 10 87685103 87685236 - Gm25745 miRNA miRNA MGP_129S1SvImJ_T0025749.1 MGP_129S1SvImJ_G0017356.1 mouse_genomes_project 10 75692971 75712875 + MGP_129S1SvImJ_P0025749 Snrpd3 protein_coding protein_coding MGP_129S1SvImJ_T0025750.1 MGP_129S1SvImJ_G0017356.1 mouse_genomes_project 10 75693434 75695287 + Snrpd3 protein_coding retained_intron MGP_129S1SvImJ_T0025910.1 MGP_129S1SvImJ_G0017400.1 mouse_genomes_project 10 77941998 77983125 + MGP_129S1SvImJ_P0025910 Sumo3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025911.1 MGP_129S1SvImJ_G0017400.1 mouse_genomes_project 10 77942010 77957530 + MGP_129S1SvImJ_P0025911 Sumo3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025912.1 MGP_129S1SvImJ_G0017400.1 mouse_genomes_project 10 77942026 77957127 + MGP_129S1SvImJ_P0025912 Sumo3 protein_coding protein_coding MGP_129S1SvImJ_T0025913.1 MGP_129S1SvImJ_G0017400.1 mouse_genomes_project 10 77942026 77957463 + MGP_129S1SvImJ_P0025913 Sumo3 protein_coding protein_coding MGP_129S1SvImJ_T0025914.1 MGP_129S1SvImJ_G0017400.1 mouse_genomes_project 10 77942122 77958247 + MGP_129S1SvImJ_P0025914 Sumo3 protein_coding protein_coding MGP_129S1SvImJ_T0025915.1 MGP_129S1SvImJ_G0017400.1 mouse_genomes_project 10 77942372 77958242 + MGP_129S1SvImJ_P0025915 Sumo3 protein_coding protein_coding MGP_129S1SvImJ_T0025916.1 MGP_129S1SvImJ_G0017400.1 mouse_genomes_project 10 77945854 77957718 + MGP_129S1SvImJ_P0025916 Sumo3 protein_coding protein_coding MGP_129S1SvImJ_T0025917.1 MGP_129S1SvImJ_G0017400.1 mouse_genomes_project 10 77953862 77956880 + Sumo3 protein_coding processed_transcript MGP_129S1SvImJ_T0026925.1 MGP_129S1SvImJ_G0017661.1 mouse_genomes_project 10 95612166 95667412 + MGP_129S1SvImJ_P0026925 Nr2c1 protein_coding protein_coding MGP_129S1SvImJ_T0026926.1 MGP_129S1SvImJ_G0017661.1 mouse_genomes_project 10 95612562 95665884 + MGP_129S1SvImJ_P0026926 Nr2c1 protein_coding protein_coding MGP_129S1SvImJ_T0026927.1 MGP_129S1SvImJ_G0017661.1 mouse_genomes_project 10 95620465 95665554 + MGP_129S1SvImJ_P0026927 Nr2c1 protein_coding protein_coding MGP_129S1SvImJ_T0025397.1 MGP_129S1SvImJ_G0017288.1 mouse_genomes_project 10 61107550 61155438 - MGP_129S1SvImJ_P0025397 H2afy2 protein_coding protein_coding MGP_129S1SvImJ_T0026320.1 MGP_129S1SvImJ_G0017513.1 mouse_genomes_project 10 81304360 81315237 - MGP_129S1SvImJ_P0026320 Mknk2 protein_coding protein_coding MGP_129S1SvImJ_T0026321.1 MGP_129S1SvImJ_G0017513.1 mouse_genomes_project 10 81308965 81311335 - MGP_129S1SvImJ_P0026321 Mknk2 protein_coding protein_coding MGP_129S1SvImJ_T0026322.1 MGP_129S1SvImJ_G0017513.1 mouse_genomes_project 10 81310653 81311295 - MGP_129S1SvImJ_P0026322 Mknk2 protein_coding protein_coding MGP_129S1SvImJ_T0026323.1 MGP_129S1SvImJ_G0017513.1 mouse_genomes_project 10 81310989 81317156 - MGP_129S1SvImJ_P0026323 Mknk2 protein_coding protein_coding MGP_129S1SvImJ_T0026127.1 MGP_129S1SvImJ_G0017472.1 mouse_genomes_project 10 80492258 80523534 + MGP_129S1SvImJ_P0026127 Arid3a protein_coding protein_coding MGP_129S1SvImJ_T0026128.1 MGP_129S1SvImJ_G0017472.1 mouse_genomes_project 10 80492354 80523227 + MGP_129S1SvImJ_P0026128 Arid3a protein_coding protein_coding MGP_129S1SvImJ_T0026129.1 MGP_129S1SvImJ_G0017472.1 mouse_genomes_project 10 80492556 80523219 + MGP_129S1SvImJ_P0026129 Arid3a protein_coding protein_coding MGP_129S1SvImJ_T0026130.1 MGP_129S1SvImJ_G0017472.1 mouse_genomes_project 10 80497190 80497985 + MGP_129S1SvImJ_P0026130 Arid3a protein_coding protein_coding MGP_129S1SvImJ_T0026131.1 MGP_129S1SvImJ_G0017472.1 mouse_genomes_project 10 80514822 80521159 + Arid3a protein_coding processed_transcript MGP_129S1SvImJ_T0011309.1 MGP_129S1SvImJ_G0009425.1 mouse_genomes_project 10 127889299 127889558 + Gm23777 misc_RNA misc_RNA MGP_129S1SvImJ_T0009654.1 MGP_129S1SvImJ_G0007770.1 mouse_genomes_project 10 132136470 132136546 + Gm25361 miRNA miRNA MGP_129S1SvImJ_T0100439.1 MGP_129S1SvImJ_G0038506.1 mouse_genomes_project 10 66167427 66167557 + Gm22594 snoRNA snoRNA MGP_129S1SvImJ_T0100419.1 MGP_129S1SvImJ_G0038486.1 mouse_genomes_project 10 23286498 23286629 - Gm25016 snoRNA snoRNA MGP_129S1SvImJ_T0024850.1 MGP_129S1SvImJ_G0017103.1 mouse_genomes_project 10 24320554 24430899 - MGP_129S1SvImJ_P0024850 L3mbtl3 protein_coding protein_coding MGP_129S1SvImJ_T0024851.1 MGP_129S1SvImJ_G0017103.1 mouse_genomes_project 10 24320557 24430899 - MGP_129S1SvImJ_P0024851 L3mbtl3 protein_coding protein_coding MGP_129S1SvImJ_T0024852.1 MGP_129S1SvImJ_G0017103.1 mouse_genomes_project 10 24321538 24432160 - MGP_129S1SvImJ_P0024852 L3mbtl3 protein_coding protein_coding MGP_129S1SvImJ_T0027422.1 MGP_129S1SvImJ_G0017839.1 mouse_genomes_project 10 131429330 131448984 + MGP_129S1SvImJ_P0027422 protein_coding protein_coding MGP_129S1SvImJ_T0026136.1 MGP_129S1SvImJ_G0017475.1 mouse_genomes_project 10 80546312 80550138 - Tmem259 protein_coding retained_intron MGP_129S1SvImJ_T0026137.1 MGP_129S1SvImJ_G0017475.1 mouse_genomes_project 10 80547254 80550305 - Tmem259 protein_coding retained_intron MGP_129S1SvImJ_T0026138.1 MGP_129S1SvImJ_G0017475.1 mouse_genomes_project 10 80548482 80557377 - MGP_129S1SvImJ_P0026138 Tmem259 protein_coding protein_coding MGP_129S1SvImJ_T0026139.1 MGP_129S1SvImJ_G0017475.1 mouse_genomes_project 10 80548722 80557065 - MGP_129S1SvImJ_P0026139 Tmem259 protein_coding protein_coding MGP_129S1SvImJ_T0026140.1 MGP_129S1SvImJ_G0017475.1 mouse_genomes_project 10 80549327 80550141 - Tmem259 protein_coding retained_intron MGP_129S1SvImJ_T0025795.1 MGP_129S1SvImJ_G0017370.1 mouse_genomes_project 10 76099081 76123521 - MGP_129S1SvImJ_P0025795 Smarcb1 protein_coding protein_coding MGP_129S1SvImJ_T0025796.1 MGP_129S1SvImJ_G0017370.1 mouse_genomes_project 10 76099085 76116127 - Smarcb1 protein_coding retained_intron MGP_129S1SvImJ_T0025797.1 MGP_129S1SvImJ_G0017370.1 mouse_genomes_project 10 76099087 76118482 - Smarcb1 protein_coding retained_intron MGP_129S1SvImJ_T0025798.1 MGP_129S1SvImJ_G0017370.1 mouse_genomes_project 10 76099089 76123518 - MGP_129S1SvImJ_P0025798 Smarcb1 protein_coding protein_coding MGP_129S1SvImJ_T0025799.1 MGP_129S1SvImJ_G0017370.1 mouse_genomes_project 10 76099840 76123493 - MGP_129S1SvImJ_P0025799 Smarcb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025800.1 MGP_129S1SvImJ_G0017370.1 mouse_genomes_project 10 76112236 76117074 - MGP_129S1SvImJ_P0025800 Smarcb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0012456.1 MGP_129S1SvImJ_G0010545.1 mouse_genomes_project 10 108289483 108289876 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0026141.1 MGP_129S1SvImJ_G0017476.1 mouse_genomes_project 10 80561630 80568980 + MGP_129S1SvImJ_P0026141 Cnn2 protein_coding protein_coding MGP_129S1SvImJ_T0026142.1 MGP_129S1SvImJ_G0017476.1 mouse_genomes_project 10 80561669 80567602 + MGP_129S1SvImJ_P0026142 Cnn2 protein_coding protein_coding MGP_129S1SvImJ_T0000861.1 MGP_129S1SvImJ_G0000794.1 mouse_genomes_project 10 123842065 123845743 - TEC TEC MGP_129S1SvImJ_T0026956.1 MGP_129S1SvImJ_G0017672.1 mouse_genomes_project 10 97261909 97262370 - MGP_129S1SvImJ_P0026956 Anapc15-ps protein_coding protein_coding MGP_129S1SvImJ_T0027521.1 MGP_129S1SvImJ_G0017872.1 mouse_genomes_project 10 132311312 132319481 - MGP_129S1SvImJ_P0027521 Pa2g4 protein_coding protein_coding MGP_129S1SvImJ_T0027522.1 MGP_129S1SvImJ_G0017872.1 mouse_genomes_project 10 132312984 132319374 - MGP_129S1SvImJ_P0027522 Pa2g4 protein_coding protein_coding MGP_129S1SvImJ_T0027523.1 MGP_129S1SvImJ_G0017872.1 mouse_genomes_project 10 132316698 132319416 - Pa2g4 protein_coding retained_intron MGP_129S1SvImJ_T0025364.1 MGP_129S1SvImJ_G0017275.1 mouse_genomes_project 10 60482362 60501017 + MGP_129S1SvImJ_P0025364 Tbata protein_coding protein_coding MGP_129S1SvImJ_T0025365.1 MGP_129S1SvImJ_G0017275.1 mouse_genomes_project 10 60482372 60490885 + MGP_129S1SvImJ_P0025365 Tbata protein_coding protein_coding MGP_129S1SvImJ_T0025366.1 MGP_129S1SvImJ_G0017275.1 mouse_genomes_project 10 60482394 60501022 + MGP_129S1SvImJ_P0025366 Tbata protein_coding protein_coding MGP_129S1SvImJ_T0025367.1 MGP_129S1SvImJ_G0017275.1 mouse_genomes_project 10 60484776 60494371 + MGP_129S1SvImJ_P0025367 Tbata protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025368.1 MGP_129S1SvImJ_G0017275.1 mouse_genomes_project 10 60484818 60501003 + MGP_129S1SvImJ_P0025368 Tbata protein_coding unknown_likely_coding MGP_129S1SvImJ_T0025369.1 MGP_129S1SvImJ_G0017275.1 mouse_genomes_project 10 60485668 60490882 + Tbata protein_coding processed_transcript MGP_129S1SvImJ_T0025370.1 MGP_129S1SvImJ_G0017275.1 mouse_genomes_project 10 60485668 60490882 + Tbata protein_coding processed_transcript MGP_129S1SvImJ_T0025371.1 MGP_129S1SvImJ_G0017275.1 mouse_genomes_project 10 60485668 60490882 + Tbata protein_coding processed_transcript MGP_129S1SvImJ_T0025372.1 MGP_129S1SvImJ_G0017275.1 mouse_genomes_project 10 60485668 60490881 + MGP_129S1SvImJ_P0025372 Tbata protein_coding protein_coding MGP_129S1SvImJ_T0025373.1 MGP_129S1SvImJ_G0017275.1 mouse_genomes_project 10 60485791 60490882 + Tbata protein_coding processed_transcript MGP_129S1SvImJ_T0025374.1 MGP_129S1SvImJ_G0017275.1 mouse_genomes_project 10 60486340 60501020 + MGP_129S1SvImJ_P0025374 Tbata protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026049.1 MGP_129S1SvImJ_G0017451.1 mouse_genomes_project 10 80205935 80212639 + MGP_129S1SvImJ_P0026049 Tpgs1 protein_coding protein_coding MGP_129S1SvImJ_T0026014.1 MGP_129S1SvImJ_G0017436.1 mouse_genomes_project 10 79448511 79452183 + MGP_129S1SvImJ_P0026014 Olfr1352 protein_coding protein_coding MGP_129S1SvImJ_T0026015.1 MGP_129S1SvImJ_G0017436.1 mouse_genomes_project 10 79448576 79451720 + MGP_129S1SvImJ_P0026015 Olfr1352 protein_coding protein_coding MGP_129S1SvImJ_T0027224.1 MGP_129S1SvImJ_G0017773.1 mouse_genomes_project 10 123345485 123347111 + Tmbim4 protein_coding processed_transcript MGP_129S1SvImJ_T0027225.1 MGP_129S1SvImJ_G0017773.1 mouse_genomes_project 10 123345507 123347104 + Tmbim4 protein_coding processed_transcript MGP_129S1SvImJ_T0027226.1 MGP_129S1SvImJ_G0017773.1 mouse_genomes_project 10 123345553 123366410 + MGP_129S1SvImJ_P0027226 Tmbim4 protein_coding protein_coding MGP_129S1SvImJ_T0027227.1 MGP_129S1SvImJ_G0017773.1 mouse_genomes_project 10 123346546 123347104 + Tmbim4 protein_coding processed_transcript MGP_129S1SvImJ_T0027228.1 MGP_129S1SvImJ_G0017773.1 mouse_genomes_project 10 123354426 123375081 + MGP_129S1SvImJ_P0027228 Tmbim4 protein_coding protein_coding MGP_129S1SvImJ_T0027229.1 MGP_129S1SvImJ_G0017773.1 mouse_genomes_project 10 123354456 123366565 + MGP_129S1SvImJ_P0027229 Tmbim4 protein_coding protein_coding MGP_129S1SvImJ_T0027230.1 MGP_129S1SvImJ_G0017773.1 mouse_genomes_project 10 123354469 123375003 + MGP_129S1SvImJ_P0027230 Tmbim4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027231.1 MGP_129S1SvImJ_G0017773.1 mouse_genomes_project 10 123370242 123374903 + Tmbim4 protein_coding retained_intron MGP_129S1SvImJ_T0027232.1 MGP_129S1SvImJ_G0017773.1 mouse_genomes_project 10 123372228 123374436 + Tmbim4 protein_coding retained_intron MGP_129S1SvImJ_T0027233.1 MGP_129S1SvImJ_G0017773.1 mouse_genomes_project 10 123372228 123375081 + Tmbim4 protein_coding retained_intron MGP_129S1SvImJ_T0026978.1 MGP_129S1SvImJ_G0017686.1 mouse_genomes_project 10 101082726 101086984 + MGP_129S1SvImJ_P0026978 Dusp6 protein_coding protein_coding MGP_129S1SvImJ_T0026575.1 MGP_129S1SvImJ_G0017577.1 mouse_genomes_project 10 83361787 83386375 + MGP_129S1SvImJ_P0026575 Tdg protein_coding protein_coding MGP_129S1SvImJ_T0026576.1 MGP_129S1SvImJ_G0017577.1 mouse_genomes_project 10 83361804 83373273 + Tdg protein_coding processed_transcript MGP_129S1SvImJ_T0026577.1 MGP_129S1SvImJ_G0017577.1 mouse_genomes_project 10 83362592 83376158 + MGP_129S1SvImJ_P0026577 Tdg protein_coding protein_coding MGP_129S1SvImJ_T0026578.1 MGP_129S1SvImJ_G0017577.1 mouse_genomes_project 10 83373103 83376174 + Tdg protein_coding retained_intron MGP_129S1SvImJ_T0026579.1 MGP_129S1SvImJ_G0017577.1 mouse_genomes_project 10 83373390 83381713 + MGP_129S1SvImJ_P0026579 Tdg protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026580.1 MGP_129S1SvImJ_G0017577.1 mouse_genomes_project 10 83373391 83380896 + MGP_129S1SvImJ_P0026580 Tdg protein_coding protein_coding MGP_129S1SvImJ_T0026581.1 MGP_129S1SvImJ_G0017577.1 mouse_genomes_project 10 83375892 83377434 + Tdg protein_coding retained_intron MGP_129S1SvImJ_T0026582.1 MGP_129S1SvImJ_G0017577.1 mouse_genomes_project 10 83376306 83380415 + Tdg protein_coding retained_intron MGP_129S1SvImJ_T0026583.1 MGP_129S1SvImJ_G0017577.1 mouse_genomes_project 10 83377051 83386212 + MGP_129S1SvImJ_P0026583 Tdg protein_coding protein_coding MGP_129S1SvImJ_T0026584.1 MGP_129S1SvImJ_G0017577.1 mouse_genomes_project 10 83379717 83381066 + Tdg protein_coding retained_intron MGP_129S1SvImJ_T0027454.1 MGP_129S1SvImJ_G0017849.1 mouse_genomes_project 10 131808303 131873442 - MGP_129S1SvImJ_P0027454 Rbms2 protein_coding protein_coding MGP_129S1SvImJ_T0024541.1 MGP_129S1SvImJ_G0017003.1 mouse_genomes_project 10 5467407 5795854 - MGP_129S1SvImJ_P0024541 Ust protein_coding protein_coding MGP_129S1SvImJ_T0026636.1 MGP_129S1SvImJ_G0017591.1 mouse_genomes_project 10 85399122 85406706 - MGP_129S1SvImJ_P0026636 Ckap4 protein_coding protein_coding MGP_129S1SvImJ_T0026637.1 MGP_129S1SvImJ_G0017591.1 mouse_genomes_project 10 85399453 85406854 - MGP_129S1SvImJ_P0026637 Ckap4 protein_coding protein_coding MGP_129S1SvImJ_T0006185.1 MGP_129S1SvImJ_G0005165.1 mouse_genomes_project 10 132406044 132411088 + Gm26876 lincRNA lincRNA MGP_129S1SvImJ_T0025244.1 MGP_129S1SvImJ_G0017243.1 mouse_genomes_project 10 57310925 57322220 - MGP_129S1SvImJ_P0025244 protein_coding protein_coding MGP_129S1SvImJ_T0025725.1 MGP_129S1SvImJ_G0017350.1 mouse_genomes_project 10 75170994 75185191 + Rab36 protein_coding retained_intron MGP_129S1SvImJ_T0025726.1 MGP_129S1SvImJ_G0017350.1 mouse_genomes_project 10 75171002 75191151 + MGP_129S1SvImJ_P0025726 Rab36 protein_coding protein_coding MGP_129S1SvImJ_T0025727.1 MGP_129S1SvImJ_G0017350.1 mouse_genomes_project 10 75171020 75190506 + MGP_129S1SvImJ_P0025727 Rab36 protein_coding protein_coding MGP_129S1SvImJ_T0025728.1 MGP_129S1SvImJ_G0017350.1 mouse_genomes_project 10 75171162 75183975 + Rab36 protein_coding retained_intron MGP_129S1SvImJ_T0025729.1 MGP_129S1SvImJ_G0017350.1 mouse_genomes_project 10 75171209 75182497 + Rab36 protein_coding retained_intron MGP_129S1SvImJ_T0025730.1 MGP_129S1SvImJ_G0017350.1 mouse_genomes_project 10 75171258 75187098 + MGP_129S1SvImJ_P0025730 Rab36 protein_coding protein_coding MGP_129S1SvImJ_T0025731.1 MGP_129S1SvImJ_G0017350.1 mouse_genomes_project 10 75171772 75190464 + MGP_129S1SvImJ_P0025731 Rab36 protein_coding protein_coding MGP_129S1SvImJ_T0025732.1 MGP_129S1SvImJ_G0017350.1 mouse_genomes_project 10 75172159 75187093 + Rab36 protein_coding retained_intron MGP_129S1SvImJ_T0025836.1 MGP_129S1SvImJ_G0017385.1 mouse_genomes_project 10 76783944 76787947 + Lss protein_coding processed_transcript MGP_129S1SvImJ_T0025837.1 MGP_129S1SvImJ_G0017385.1 mouse_genomes_project 10 76783963 76801256 + Lss protein_coding retained_intron MGP_129S1SvImJ_T0025838.1 MGP_129S1SvImJ_G0017385.1 mouse_genomes_project 10 76783963 76807867 + MGP_129S1SvImJ_P0025838 Lss protein_coding protein_coding MGP_129S1SvImJ_T0025839.1 MGP_129S1SvImJ_G0017385.1 mouse_genomes_project 10 76783968 76809526 + Lss protein_coding retained_intron MGP_129S1SvImJ_T0025840.1 MGP_129S1SvImJ_G0017385.1 mouse_genomes_project 10 76784038 76788102 + Lss protein_coding retained_intron MGP_129S1SvImJ_T0025841.1 MGP_129S1SvImJ_G0017385.1 mouse_genomes_project 10 76794269 76795134 + MGP_129S1SvImJ_P0025841 Lss protein_coding protein_coding MGP_129S1SvImJ_T0025842.1 MGP_129S1SvImJ_G0017385.1 mouse_genomes_project 10 76803597 76809006 + Lss protein_coding retained_intron MGP_129S1SvImJ_T0025843.1 MGP_129S1SvImJ_G0017385.1 mouse_genomes_project 10 76804658 76805621 + Lss protein_coding retained_intron MGP_129S1SvImJ_T0027378.1 MGP_129S1SvImJ_G0017823.1 mouse_genomes_project 10 131121871 131129009 + MGP_129S1SvImJ_P0027378 Stac3 protein_coding protein_coding MGP_129S1SvImJ_T0027379.1 MGP_129S1SvImJ_G0017823.1 mouse_genomes_project 10 131121879 131123024 + MGP_129S1SvImJ_P0027379 Stac3 protein_coding protein_coding MGP_129S1SvImJ_T0027380.1 MGP_129S1SvImJ_G0017823.1 mouse_genomes_project 10 131121902 131129001 + MGP_129S1SvImJ_P0027380 Stac3 protein_coding protein_coding MGP_129S1SvImJ_T0027381.1 MGP_129S1SvImJ_G0017823.1 mouse_genomes_project 10 131124676 131127674 + Stac3 protein_coding retained_intron MGP_129S1SvImJ_T0027382.1 MGP_129S1SvImJ_G0017823.1 mouse_genomes_project 10 131127410 131128178 + Stac3 protein_coding retained_intron MGP_129S1SvImJ_T0011289.1 MGP_129S1SvImJ_G0009405.1 mouse_genomes_project 10 41006698 41006943 + Gm23533 misc_RNA misc_RNA MGP_129S1SvImJ_T0025925.1 MGP_129S1SvImJ_G0017405.1 mouse_genomes_project 10 78060928 78061291 + MGP_129S1SvImJ_P0025925 Gm10142 protein_coding protein_coding MGP_129S1SvImJ_T0025325.1 MGP_129S1SvImJ_G0017268.1 mouse_genomes_project 10 59529302 59900817 - MGP_129S1SvImJ_P0025325 Cdh23 protein_coding protein_coding MGP_129S1SvImJ_T0025326.1 MGP_129S1SvImJ_G0017268.1 mouse_genomes_project 10 59529302 59900817 - MGP_129S1SvImJ_P0025326 Cdh23 protein_coding protein_coding MGP_129S1SvImJ_T0025327.1 MGP_129S1SvImJ_G0017268.1 mouse_genomes_project 10 59529304 59943432 - MGP_129S1SvImJ_P0025327 Cdh23 protein_coding protein_coding MGP_129S1SvImJ_T0025328.1 MGP_129S1SvImJ_G0017268.1 mouse_genomes_project 10 59529304 59943432 - MGP_129S1SvImJ_P0025328 Cdh23 protein_coding protein_coding MGP_129S1SvImJ_T0025329.1 MGP_129S1SvImJ_G0017268.1 mouse_genomes_project 10 59529304 59943432 - MGP_129S1SvImJ_P0025329 Cdh23 protein_coding protein_coding MGP_129S1SvImJ_T0025330.1 MGP_129S1SvImJ_G0017268.1 mouse_genomes_project 10 59529839 59548048 - Cdh23 protein_coding processed_transcript MGP_129S1SvImJ_T0025331.1 MGP_129S1SvImJ_G0017268.1 mouse_genomes_project 10 59529839 59548048 - Cdh23 protein_coding processed_transcript MGP_129S1SvImJ_T0025332.1 MGP_129S1SvImJ_G0017268.1 mouse_genomes_project 10 59529864 59900817 - Cdh23 protein_coding retained_intron MGP_129S1SvImJ_T0025333.1 MGP_129S1SvImJ_G0017268.1 mouse_genomes_project 10 59529864 59900817 - Cdh23 protein_coding retained_intron MGP_129S1SvImJ_T0025334.1 MGP_129S1SvImJ_G0017268.1 mouse_genomes_project 10 59529917 59532212 - Cdh23 protein_coding retained_intron MGP_129S1SvImJ_T0025341.1 MGP_129S1SvImJ_G0017268.1 mouse_genomes_project 10 59601754 59613340 - Cdh23 protein_coding retained_intron MGP_129S1SvImJ_T0025342.1 MGP_129S1SvImJ_G0017268.1 mouse_genomes_project 10 59603076 59632747 - Cdh23 protein_coding processed_transcript MGP_129S1SvImJ_T0025343.1 MGP_129S1SvImJ_G0017268.1 mouse_genomes_project 10 59603170 59606497 - Cdh23 protein_coding processed_transcript MGP_129S1SvImJ_T0025345.1 MGP_129S1SvImJ_G0017268.1 mouse_genomes_project 10 59823738 59943432 - Cdh23 protein_coding processed_transcript MGP_129S1SvImJ_T0025346.1 MGP_129S1SvImJ_G0017268.1 mouse_genomes_project 10 59871952 59896517 - Cdh23 protein_coding processed_transcript MGP_129S1SvImJ_T0025347.1 MGP_129S1SvImJ_G0017268.1 mouse_genomes_project 10 59900749 59934199 - Cdh23 protein_coding processed_transcript MGP_129S1SvImJ_T0026717.1 MGP_129S1SvImJ_G0017620.1 mouse_genomes_project 10 88910316 88983014 + MGP_129S1SvImJ_P0026717 Igf1 protein_coding protein_coding MGP_129S1SvImJ_T0026718.1 MGP_129S1SvImJ_G0017620.1 mouse_genomes_project 10 88911116 88989161 + MGP_129S1SvImJ_P0026718 Igf1 protein_coding protein_coding MGP_129S1SvImJ_T0026719.1 MGP_129S1SvImJ_G0017620.1 mouse_genomes_project 10 88911306 88983920 + MGP_129S1SvImJ_P0026719 Igf1 protein_coding protein_coding MGP_129S1SvImJ_T0026720.1 MGP_129S1SvImJ_G0017620.1 mouse_genomes_project 10 88911538 88983012 + MGP_129S1SvImJ_P0026720 Igf1 protein_coding protein_coding MGP_129S1SvImJ_T0026721.1 MGP_129S1SvImJ_G0017620.1 mouse_genomes_project 10 88911659 88967480 + MGP_129S1SvImJ_P0026721 Igf1 protein_coding protein_coding MGP_129S1SvImJ_T0026722.1 MGP_129S1SvImJ_G0017620.1 mouse_genomes_project 10 88912078 88968025 + MGP_129S1SvImJ_P0026722 Igf1 protein_coding protein_coding MGP_129S1SvImJ_T0026723.1 MGP_129S1SvImJ_G0017620.1 mouse_genomes_project 10 88912654 88983018 + MGP_129S1SvImJ_P0026723 Igf1 protein_coding protein_coding MGP_129S1SvImJ_T0026724.1 MGP_129S1SvImJ_G0017620.1 mouse_genomes_project 10 88913377 88982996 + MGP_129S1SvImJ_P0026724 Igf1 protein_coding protein_coding MGP_129S1SvImJ_T0026999.1 MGP_129S1SvImJ_G0017694.1 mouse_genomes_project 10 103598085 103957647 + Mgat4c protein_coding retained_intron MGP_129S1SvImJ_T0027000.1 MGP_129S1SvImJ_G0017694.1 mouse_genomes_project 10 103598085 104370585 + MGP_129S1SvImJ_P0027000 Mgat4c protein_coding protein_coding MGP_129S1SvImJ_T0027001.1 MGP_129S1SvImJ_G0017694.1 mouse_genomes_project 10 103598239 104355392 + Mgat4c protein_coding processed_transcript MGP_129S1SvImJ_T0027002.1 MGP_129S1SvImJ_G0017694.1 mouse_genomes_project 10 103598239 104356012 + MGP_129S1SvImJ_P0027002 Mgat4c protein_coding protein_coding MGP_129S1SvImJ_T0027003.1 MGP_129S1SvImJ_G0017694.1 mouse_genomes_project 10 103598344 104364184 + MGP_129S1SvImJ_P0027003 Mgat4c protein_coding protein_coding MGP_129S1SvImJ_T0027004.1 MGP_129S1SvImJ_G0017694.1 mouse_genomes_project 10 104116612 104367495 + MGP_129S1SvImJ_P0027004 Mgat4c protein_coding protein_coding MGP_129S1SvImJ_T0027005.1 MGP_129S1SvImJ_G0017694.1 mouse_genomes_project 10 104116612 104370588 + MGP_129S1SvImJ_P0027005 Mgat4c protein_coding protein_coding MGP_129S1SvImJ_T0027006.1 MGP_129S1SvImJ_G0017694.1 mouse_genomes_project 10 104116632 104237174 + Mgat4c protein_coding processed_transcript MGP_129S1SvImJ_T0027007.1 MGP_129S1SvImJ_G0017694.1 mouse_genomes_project 10 104116643 104355939 + MGP_129S1SvImJ_P0027007 Mgat4c protein_coding protein_coding MGP_129S1SvImJ_T0027008.1 MGP_129S1SvImJ_G0017694.1 mouse_genomes_project 10 104116659 104237175 + Mgat4c protein_coding processed_transcript MGP_129S1SvImJ_T0027009.1 MGP_129S1SvImJ_G0017694.1 mouse_genomes_project 10 104116833 104370588 + MGP_129S1SvImJ_P0027009 Mgat4c protein_coding protein_coding MGP_129S1SvImJ_T0027010.1 MGP_129S1SvImJ_G0017694.1 mouse_genomes_project 10 104352129 104369432 + MGP_129S1SvImJ_P0027010 Mgat4c protein_coding protein_coding MGP_129S1SvImJ_T0027029.1 MGP_129S1SvImJ_G0017703.1 mouse_genomes_project 10 107872336 107951833 - MGP_129S1SvImJ_P0027029 Mettl25 protein_coding protein_coding MGP_129S1SvImJ_T0027030.1 MGP_129S1SvImJ_G0017703.1 mouse_genomes_project 10 107872402 107951835 - MGP_129S1SvImJ_P0027030 Mettl25 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027031.1 MGP_129S1SvImJ_G0017703.1 mouse_genomes_project 10 107937027 107951826 - MGP_129S1SvImJ_P0027031 Mettl25 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027032.1 MGP_129S1SvImJ_G0017703.1 mouse_genomes_project 10 107949659 107951666 - Mettl25 protein_coding processed_transcript MGP_129S1SvImJ_T0012407.1 MGP_129S1SvImJ_G0010496.1 mouse_genomes_project 10 18274038 18277405 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024544.1 MGP_129S1SvImJ_G0017005.1 mouse_genomes_project 10 6859313 6862464 - MGP_129S1SvImJ_P0024544 Gm9930 protein_coding protein_coding MGP_129S1SvImJ_T0026681.1 MGP_129S1SvImJ_G0017608.1 mouse_genomes_project 10 87002631 87463157 - MGP_129S1SvImJ_P0026681 Syn3 protein_coding protein_coding MGP_129S1SvImJ_T0026682.1 MGP_129S1SvImJ_G0017608.1 mouse_genomes_project 10 87004929 87014340 - Syn3 protein_coding processed_transcript MGP_129S1SvImJ_T0026683.1 MGP_129S1SvImJ_G0017608.1 mouse_genomes_project 10 87017982 87455639 - Syn3 protein_coding retained_intron MGP_129S1SvImJ_T0026685.1 MGP_129S1SvImJ_G0017608.1 mouse_genomes_project 10 87250068 87463183 - MGP_129S1SvImJ_P0026685 Syn3 protein_coding protein_coding MGP_129S1SvImJ_T0026690.1 MGP_129S1SvImJ_G0017608.1 mouse_genomes_project 10 87307960 87455639 - Syn3 protein_coding retained_intron MGP_129S1SvImJ_T0026691.1 MGP_129S1SvImJ_G0017608.1 mouse_genomes_project 10 87311331 87463197 - Syn3 protein_coding retained_intron MGP_129S1SvImJ_T0099191.1 MGP_129S1SvImJ_G0037258.1 mouse_genomes_project 10 81085010 81085114 + Gm25044 snRNA snRNA MGP_129S1SvImJ_T0101837.1 MGP_129S1SvImJ_G0039789.1 mouse_genomes_project 10 19914194 19932190 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0012417.1 MGP_129S1SvImJ_G0010506.1 mouse_genomes_project 10 29805774 29807943 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099175.1 MGP_129S1SvImJ_G0037242.1 mouse_genomes_project 10 45759067 45759229 - Gm25650 snRNA snRNA MGP_129S1SvImJ_T0025278.1 MGP_129S1SvImJ_G0017257.1 mouse_genomes_project 10 58588384 58610203 - MGP_129S1SvImJ_P0025278 Oit3 protein_coding protein_coding MGP_129S1SvImJ_T0025279.1 MGP_129S1SvImJ_G0017257.1 mouse_genomes_project 10 58594762 58599568 - Oit3 protein_coding retained_intron MGP_129S1SvImJ_T0027156.1 MGP_129S1SvImJ_G0017751.1 mouse_genomes_project 10 119866730 119868158 + MGP_129S1SvImJ_P0027156 Lrrc10 protein_coding protein_coding MGP_129S1SvImJ_T0027107.1 MGP_129S1SvImJ_G0017738.1 mouse_genomes_project 10 118089535 118141710 + MGP_129S1SvImJ_P0027107 Zfc3h1 protein_coding protein_coding MGP_129S1SvImJ_T0027108.1 MGP_129S1SvImJ_G0017738.1 mouse_genomes_project 10 118135221 118141709 + Zfc3h1 protein_coding retained_intron MGP_129S1SvImJ_T0027109.1 MGP_129S1SvImJ_G0017738.1 mouse_genomes_project 10 118136423 118139812 + Zfc3h1 protein_coding retained_intron MGP_129S1SvImJ_T0027110.1 MGP_129S1SvImJ_G0017738.1 mouse_genomes_project 10 118140016 118140700 + Zfc3h1 protein_coding retained_intron MGP_129S1SvImJ_T0027614.1 MGP_129S1SvImJ_G0017926.1 mouse_genomes_project 10 133595837 133596782 + MGP_129S1SvImJ_P0027614 Olfr804 protein_coding protein_coding MGP_129S1SvImJ_T0098726.1 MGP_129S1SvImJ_G0036811.1 mouse_genomes_project 10 132172790 132172921 + Gm26347 scaRNA scaRNA MGP_129S1SvImJ_T0027090.1 MGP_129S1SvImJ_G0017726.1 mouse_genomes_project 10 114575630 114606323 + MGP_129S1SvImJ_P0027090 Glipr1l2 protein_coding protein_coding MGP_129S1SvImJ_T0027091.1 MGP_129S1SvImJ_G0017726.1 mouse_genomes_project 10 114575630 114607110 + MGP_129S1SvImJ_P0027091 Glipr1l2 protein_coding protein_coding MGP_129S1SvImJ_T0024801.1 MGP_129S1SvImJ_G0017082.1 mouse_genomes_project 10 21928665 21929727 - MGP_129S1SvImJ_P0024801 Taar7a protein_coding protein_coding MGP_129S1SvImJ_T0011303.1 MGP_129S1SvImJ_G0009419.1 mouse_genomes_project 10 93469582 93469691 - Gm27419 misc_RNA misc_RNA MGP_129S1SvImJ_T0025556.1 MGP_129S1SvImJ_G0017328.1 mouse_genomes_project 10 67766208 67835837 + MGP_129S1SvImJ_P0025556 Rtkn2 protein_coding protein_coding MGP_129S1SvImJ_T0025557.1 MGP_129S1SvImJ_G0017328.1 mouse_genomes_project 10 67766236 67835833 + MGP_129S1SvImJ_P0025557 Rtkn2 protein_coding protein_coding MGP_129S1SvImJ_T0025558.1 MGP_129S1SvImJ_G0017328.1 mouse_genomes_project 10 67766243 67851730 + MGP_129S1SvImJ_P0025558 Rtkn2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025559.1 MGP_129S1SvImJ_G0017328.1 mouse_genomes_project 10 67766336 67851733 + MGP_129S1SvImJ_P0025559 Rtkn2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025560.1 MGP_129S1SvImJ_G0017328.1 mouse_genomes_project 10 67766353 67834268 + MGP_129S1SvImJ_P0025560 Rtkn2 protein_coding protein_coding MGP_129S1SvImJ_T0025561.1 MGP_129S1SvImJ_G0017328.1 mouse_genomes_project 10 67835936 67843090 + Rtkn2 protein_coding processed_transcript MGP_129S1SvImJ_T0026465.1 MGP_129S1SvImJ_G0017556.1 mouse_genomes_project 10 82078575 82091652 - MGP_129S1SvImJ_P0026465 Fzr1 protein_coding protein_coding MGP_129S1SvImJ_T0026466.1 MGP_129S1SvImJ_G0017556.1 mouse_genomes_project 10 82079451 82091587 - MGP_129S1SvImJ_P0026466 Fzr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026467.1 MGP_129S1SvImJ_G0017556.1 mouse_genomes_project 10 82079725 82091599 - Fzr1 protein_coding retained_intron MGP_129S1SvImJ_T0026468.1 MGP_129S1SvImJ_G0017556.1 mouse_genomes_project 10 82079862 82083767 - MGP_129S1SvImJ_P0026468 Fzr1 protein_coding protein_coding MGP_129S1SvImJ_T0026469.1 MGP_129S1SvImJ_G0017556.1 mouse_genomes_project 10 82080629 82081895 - Fzr1 protein_coding retained_intron MGP_129S1SvImJ_T0026470.1 MGP_129S1SvImJ_G0017556.1 mouse_genomes_project 10 82088498 82091516 - Fzr1 protein_coding processed_transcript MGP_129S1SvImJ_T0026701.1 MGP_129S1SvImJ_G0017615.1 mouse_genomes_project 10 87764562 87819050 + MGP_129S1SvImJ_P0026701 Nt5dc3 protein_coding protein_coding MGP_129S1SvImJ_T0025517.1 MGP_129S1SvImJ_G0017316.1 mouse_genomes_project 10 62915826 62938906 + Dnajc12 protein_coding retained_intron MGP_129S1SvImJ_T0025518.1 MGP_129S1SvImJ_G0017316.1 mouse_genomes_project 10 62915953 62938362 + MGP_129S1SvImJ_P0025518 Dnajc12 protein_coding protein_coding MGP_129S1SvImJ_T0027355.1 MGP_129S1SvImJ_G0017819.1 mouse_genomes_project 10 130921979 130935087 - MGP_129S1SvImJ_P0027355 Gli1 protein_coding protein_coding MGP_129S1SvImJ_T0027338.1 MGP_129S1SvImJ_G0017815.1 mouse_genomes_project 10 130872410 130879256 - MGP_129S1SvImJ_P0027338 Mbd6 protein_coding protein_coding MGP_129S1SvImJ_T0027339.1 MGP_129S1SvImJ_G0017815.1 mouse_genomes_project 10 130872410 130876355 - MGP_129S1SvImJ_P0027339 Mbd6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027340.1 MGP_129S1SvImJ_G0017815.1 mouse_genomes_project 10 130872410 130874123 - MGP_129S1SvImJ_P0027340 Mbd6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027341.1 MGP_129S1SvImJ_G0017815.1 mouse_genomes_project 10 130873130 130874813 - MGP_129S1SvImJ_P0027341 Mbd6 protein_coding protein_coding MGP_129S1SvImJ_T0027342.1 MGP_129S1SvImJ_G0017815.1 mouse_genomes_project 10 130873287 130879221 - MGP_129S1SvImJ_P0027342 Mbd6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0027343.1 MGP_129S1SvImJ_G0017815.1 mouse_genomes_project 10 130873980 130874826 - MGP_129S1SvImJ_P0027343 Mbd6 protein_coding protein_coding MGP_129S1SvImJ_T0027344.1 MGP_129S1SvImJ_G0017815.1 mouse_genomes_project 10 130877022 130879219 - MGP_129S1SvImJ_P0027344 Mbd6 protein_coding protein_coding MGP_129S1SvImJ_T0011293.1 MGP_129S1SvImJ_G0009409.1 mouse_genomes_project 10 70444590 70444902 - Gm22320 misc_RNA misc_RNA MGP_129S1SvImJ_T0026013.1 MGP_129S1SvImJ_G0017435.1 mouse_genomes_project 10 79432860 79433875 + MGP_129S1SvImJ_P0026013 Olfr1353 protein_coding protein_coding MGP_129S1SvImJ_T0003047.1 MGP_129S1SvImJ_G0002851.1 mouse_genomes_project 10 40410562 40417737 + BC048559 antisense antisense MGP_129S1SvImJ_T0011308.1 MGP_129S1SvImJ_G0009424.1 mouse_genomes_project 10 117951379 117951685 - Gm22794 misc_RNA misc_RNA MGP_129S1SvImJ_T0025927.1 MGP_129S1SvImJ_G0017407.1 mouse_genomes_project 10 78071607 78071970 + MGP_129S1SvImJ_P0025927 Gm10100 protein_coding protein_coding MGP_129S1SvImJ_T0025926.1 MGP_129S1SvImJ_G0017406.1 mouse_genomes_project 10 78065707 78066378 + MGP_129S1SvImJ_P0025926 Krtap12-1 protein_coding protein_coding MGP_129S1SvImJ_T0025352.1 MGP_129S1SvImJ_G0017272.1 mouse_genomes_project 10 60024273 60100113 - MGP_129S1SvImJ_P0025352 Unc5b protein_coding protein_coding MGP_129S1SvImJ_T0025506.1 MGP_129S1SvImJ_G0017312.1 mouse_genomes_project 10 62606304 62606754 + MGP_129S1SvImJ_P0025506 Atoh7 protein_coding protein_coding MGP_129S1SvImJ_T0098293.1 MGP_129S1SvImJ_G0036378.1 mouse_genomes_project 10 73169952 73170424 + pseudogene pseudogene MGP_129S1SvImJ_T0025220.1 MGP_129S1SvImJ_G0017236.1 mouse_genomes_project 10 55684286 55700175 + MGP_129S1SvImJ_P0025220 Gja1 protein_coding protein_coding MGP_129S1SvImJ_T0102119.1 MGP_129S1SvImJ_G0039954.1 mouse_genomes_project 10 133424257 133425149 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0026980.1 MGP_129S1SvImJ_G0017688.1 mouse_genomes_project 10 101601826 101603780 - MGP_129S1SvImJ_P0026980 Csl protein_coding protein_coding MGP_129S1SvImJ_T0026143.1 MGP_129S1SvImJ_G0017477.1 mouse_genomes_project 10 80569411 80588489 + MGP_129S1SvImJ_P0026143 Abca7 protein_coding protein_coding MGP_129S1SvImJ_T0026144.1 MGP_129S1SvImJ_G0017477.1 mouse_genomes_project 10 80570493 80588470 + MGP_129S1SvImJ_P0026144 Abca7 protein_coding protein_coding MGP_129S1SvImJ_T0026145.1 MGP_129S1SvImJ_G0017477.1 mouse_genomes_project 10 80570532 80588485 + MGP_129S1SvImJ_P0026145 Abca7 protein_coding protein_coding MGP_129S1SvImJ_T0000851.1 MGP_129S1SvImJ_G0000784.1 mouse_genomes_project 10 102666643 102667407 - TEC TEC MGP_129S1SvImJ_T0099166.1 MGP_129S1SvImJ_G0037233.1 mouse_genomes_project 10 29169317 29169424 - Gm24168 snRNA snRNA MGP_129S1SvImJ_T0026480.1 MGP_129S1SvImJ_G0017558.1 mouse_genomes_project 10 82107408 82109212 + MGP_129S1SvImJ_P0026480 Smim24 protein_coding protein_coding MGP_129S1SvImJ_T0026481.1 MGP_129S1SvImJ_G0017558.1 mouse_genomes_project 10 82107969 82109457 + Smim24 protein_coding processed_transcript MGP_129S1SvImJ_T0099161.1 MGP_129S1SvImJ_G0037228.1 mouse_genomes_project 10 17511561 17511663 + Gm25256 snRNA snRNA MGP_129S1SvImJ_T0012414.1 MGP_129S1SvImJ_G0010503.1 mouse_genomes_project 10 23871675 23872241 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0025471.1 MGP_129S1SvImJ_G0017306.1 mouse_genomes_project 10 62267115 62354804 - MGP_129S1SvImJ_P0025471 Tet1 protein_coding protein_coding MGP_129S1SvImJ_T0025472.1 MGP_129S1SvImJ_G0017306.1 mouse_genomes_project 10 62267122 62377930 - MGP_129S1SvImJ_P0025472 Tet1 protein_coding protein_coding MGP_129S1SvImJ_T0025473.1 MGP_129S1SvImJ_G0017306.1 mouse_genomes_project 10 62275167 62277086 - MGP_129S1SvImJ_P0025473 Tet1 protein_coding protein_coding MGP_129S1SvImJ_T0025474.1 MGP_129S1SvImJ_G0017306.1 mouse_genomes_project 10 62275671 62277087 - MGP_129S1SvImJ_P0025474 Tet1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025475.1 MGP_129S1SvImJ_G0017306.1 mouse_genomes_project 10 62275893 62277085 - MGP_129S1SvImJ_P0025475 Tet1 protein_coding protein_coding MGP_129S1SvImJ_T0025476.1 MGP_129S1SvImJ_G0017306.1 mouse_genomes_project 10 62305638 62338652 - Tet1 protein_coding processed_transcript MGP_129S1SvImJ_T0024698.1 MGP_129S1SvImJ_G0017043.1 mouse_genomes_project 10 16706594 16720971 - MGP_129S1SvImJ_P0024698 Tnfaip3 protein_coding protein_coding MGP_129S1SvImJ_T0024699.1 MGP_129S1SvImJ_G0017043.1 mouse_genomes_project 10 16706597 16717527 - MGP_129S1SvImJ_P0024699 Tnfaip3 protein_coding protein_coding MGP_129S1SvImJ_T0024700.1 MGP_129S1SvImJ_G0017043.1 mouse_genomes_project 10 16706613 16720937 - Tnfaip3 protein_coding retained_intron MGP_129S1SvImJ_T0024701.1 MGP_129S1SvImJ_G0017043.1 mouse_genomes_project 10 16712950 16714529 - Tnfaip3 protein_coding retained_intron MGP_129S1SvImJ_T0024702.1 MGP_129S1SvImJ_G0017043.1 mouse_genomes_project 10 16713949 16721218 - MGP_129S1SvImJ_P0024702 Tnfaip3 protein_coding protein_coding MGP_129S1SvImJ_T0024703.1 MGP_129S1SvImJ_G0017043.1 mouse_genomes_project 10 16717079 16720142 - MGP_129S1SvImJ_P0024703 Tnfaip3 protein_coding protein_coding MGP_129S1SvImJ_T0025881.1 MGP_129S1SvImJ_G0017395.1 mouse_genomes_project 10 77555338 77565625 + MGP_129S1SvImJ_P0025881 Pofut2 protein_coding protein_coding MGP_129S1SvImJ_T0027396.1 MGP_129S1SvImJ_G0017828.1 mouse_genomes_project 10 131268807 131286650 + MGP_129S1SvImJ_P0027396 Stat6 protein_coding protein_coding MGP_129S1SvImJ_T0027397.1 MGP_129S1SvImJ_G0017828.1 mouse_genomes_project 10 131268823 131276602 + MGP_129S1SvImJ_P0027397 Stat6 protein_coding protein_coding MGP_129S1SvImJ_T0027398.1 MGP_129S1SvImJ_G0017828.1 mouse_genomes_project 10 131278907 131280844 + Stat6 protein_coding retained_intron MGP_129S1SvImJ_T0027399.1 MGP_129S1SvImJ_G0017828.1 mouse_genomes_project 10 131282589 131283750 + Stat6 protein_coding retained_intron MGP_129S1SvImJ_T0027400.1 MGP_129S1SvImJ_G0017828.1 mouse_genomes_project 10 131285092 131285880 + Stat6 protein_coding retained_intron MGP_129S1SvImJ_T0025551.1 MGP_129S1SvImJ_G0017326.1 mouse_genomes_project 10 67337127 67339349 + MGP_129S1SvImJ_P0025551 Gm10797 protein_coding protein_coding MGP_129S1SvImJ_T0027345.1 MGP_129S1SvImJ_G0017816.1 mouse_genomes_project 10 130881139 130886654 + MGP_129S1SvImJ_P0027345 Ddit3 protein_coding protein_coding MGP_129S1SvImJ_T0027346.1 MGP_129S1SvImJ_G0017816.1 mouse_genomes_project 10 130881158 130886431 + MGP_129S1SvImJ_P0027346 Ddit3 protein_coding protein_coding MGP_129S1SvImJ_T0027347.1 MGP_129S1SvImJ_G0017816.1 mouse_genomes_project 10 130881159 130884948 + Ddit3 protein_coding retained_intron MGP_129S1SvImJ_T0026861.1 MGP_129S1SvImJ_G0017646.1 mouse_genomes_project 10 94054731 94092467 - MGP_129S1SvImJ_P0026861 Nedd1 protein_coding protein_coding MGP_129S1SvImJ_T0102111.1 MGP_129S1SvImJ_G0039946.1 mouse_genomes_project 10 21962528 21963061 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0027151.1 MGP_129S1SvImJ_G0017747.1 mouse_genomes_project 10 119577110 119699080 - MGP_129S1SvImJ_P0027151 Myrfl protein_coding protein_coding MGP_129S1SvImJ_T0027524.1 MGP_129S1SvImJ_G0017873.1 mouse_genomes_project 10 132321069 132343192 - MGP_129S1SvImJ_P0027524 Erbb3 protein_coding protein_coding MGP_129S1SvImJ_T0026211.1 MGP_129S1SvImJ_G0017489.1 mouse_genomes_project 10 80819207 80836677 + MGP_129S1SvImJ_P0026211 Mum1 protein_coding protein_coding MGP_129S1SvImJ_T0026212.1 MGP_129S1SvImJ_G0017489.1 mouse_genomes_project 10 80819428 80836674 + Mum1 protein_coding retained_intron MGP_129S1SvImJ_T0026213.1 MGP_129S1SvImJ_G0017489.1 mouse_genomes_project 10 80819445 80825454 + MGP_129S1SvImJ_P0026213 Mum1 protein_coding protein_coding MGP_129S1SvImJ_T0026214.1 MGP_129S1SvImJ_G0017489.1 mouse_genomes_project 10 80819453 80836672 + Mum1 protein_coding retained_intron MGP_129S1SvImJ_T0026215.1 MGP_129S1SvImJ_G0017489.1 mouse_genomes_project 10 80819524 80821945 + Mum1 protein_coding retained_intron MGP_129S1SvImJ_T0026216.1 MGP_129S1SvImJ_G0017489.1 mouse_genomes_project 10 80826967 80836677 + Mum1 protein_coding retained_intron MGP_129S1SvImJ_T0026217.1 MGP_129S1SvImJ_G0017489.1 mouse_genomes_project 10 80826968 80829888 + Mum1 protein_coding retained_intron MGP_129S1SvImJ_T0026218.1 MGP_129S1SvImJ_G0017489.1 mouse_genomes_project 10 80827033 80836675 + Mum1 protein_coding retained_intron MGP_129S1SvImJ_T0026219.1 MGP_129S1SvImJ_G0017489.1 mouse_genomes_project 10 80828884 80833166 + Mum1 protein_coding retained_intron MGP_129S1SvImJ_T0026220.1 MGP_129S1SvImJ_G0017489.1 mouse_genomes_project 10 80834311 80836674 + Mum1 protein_coding retained_intron MGP_129S1SvImJ_T0026221.1 MGP_129S1SvImJ_G0017489.1 mouse_genomes_project 10 80835385 80836674 + Mum1 protein_coding processed_transcript MGP_129S1SvImJ_T0012403.1 MGP_129S1SvImJ_G0010492.1 mouse_genomes_project 10 7693942 7695154 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100435.1 MGP_129S1SvImJ_G0038502.1 mouse_genomes_project 10 58340963 58341090 + Gm23223 snoRNA snoRNA MGP_129S1SvImJ_T0101601.1 MGP_129S1SvImJ_G0039652.1 mouse_genomes_project 10 27040636 27075241 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101602.1 MGP_129S1SvImJ_G0039652.1 mouse_genomes_project 10 27074802 27083966 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0026605.1 MGP_129S1SvImJ_G0017583.1 mouse_genomes_project 10 83756847 83977760 + MGP_129S1SvImJ_P0026605 Chst11 protein_coding protein_coding MGP_129S1SvImJ_T0000850.1 MGP_129S1SvImJ_G0000783.1 mouse_genomes_project 10 100263642 100264006 - TEC TEC MGP_129S1SvImJ_T0026240.1 MGP_129S1SvImJ_G0017494.1 mouse_genomes_project 10 80895599 80917855 + MGP_129S1SvImJ_P0026240 Apc2 protein_coding protein_coding MGP_129S1SvImJ_T0026241.1 MGP_129S1SvImJ_G0017494.1 mouse_genomes_project 10 80898678 80901953 + MGP_129S1SvImJ_P0026241 Apc2 protein_coding protein_coding MGP_129S1SvImJ_T0026242.1 MGP_129S1SvImJ_G0017494.1 mouse_genomes_project 10 80900434 80902947 + Apc2 protein_coding retained_intron MGP_129S1SvImJ_T0026243.1 MGP_129S1SvImJ_G0017494.1 mouse_genomes_project 10 80900621 80901939 + MGP_129S1SvImJ_P0026243 Apc2 protein_coding protein_coding MGP_129S1SvImJ_T0026244.1 MGP_129S1SvImJ_G0017494.1 mouse_genomes_project 10 80900622 80901998 + MGP_129S1SvImJ_P0026244 Apc2 protein_coding protein_coding MGP_129S1SvImJ_T0026245.1 MGP_129S1SvImJ_G0017494.1 mouse_genomes_project 10 80901411 80917848 + MGP_129S1SvImJ_P0026245 Apc2 protein_coding protein_coding MGP_129S1SvImJ_T0003040.1 MGP_129S1SvImJ_G0002848.1 mouse_genomes_project 10 38071662 38103924 - Gm16365 antisense antisense MGP_129S1SvImJ_T0003041.1 MGP_129S1SvImJ_G0002848.1 mouse_genomes_project 10 38073191 38131311 - Gm16365 antisense antisense MGP_129S1SvImJ_T0003042.1 MGP_129S1SvImJ_G0002848.1 mouse_genomes_project 10 38075546 38131315 - Gm16365 antisense antisense MGP_129S1SvImJ_T0003043.1 MGP_129S1SvImJ_G0002848.1 mouse_genomes_project 10 38111268 38131326 - Gm16365 antisense antisense MGP_129S1SvImJ_T0006175.1 MGP_129S1SvImJ_G0005158.1 mouse_genomes_project 10 119516824 119523737 - 1700030O20Rik lincRNA lincRNA MGP_129S1SvImJ_T0026273.1 MGP_129S1SvImJ_G0017501.1 mouse_genomes_project 10 80995243 81001937 - MGP_129S1SvImJ_P0026273 Mbd3 protein_coding protein_coding MGP_129S1SvImJ_T0026274.1 MGP_129S1SvImJ_G0017501.1 mouse_genomes_project 10 80995244 81002256 - MGP_129S1SvImJ_P0026274 Mbd3 protein_coding protein_coding MGP_129S1SvImJ_T0026275.1 MGP_129S1SvImJ_G0017501.1 mouse_genomes_project 10 80995544 81002128 - MGP_129S1SvImJ_P0026275 Mbd3 protein_coding protein_coding MGP_129S1SvImJ_T0026276.1 MGP_129S1SvImJ_G0017501.1 mouse_genomes_project 10 80995687 80998432 - MGP_129S1SvImJ_P0026276 Mbd3 protein_coding protein_coding MGP_129S1SvImJ_T0026277.1 MGP_129S1SvImJ_G0017501.1 mouse_genomes_project 10 80996607 80998039 - Mbd3 protein_coding processed_transcript MGP_129S1SvImJ_T0025273.1 MGP_129S1SvImJ_G0017255.1 mouse_genomes_project 10 58489132 58540713 + MGP_129S1SvImJ_P0025273 P4ha1 protein_coding protein_coding MGP_129S1SvImJ_T0025274.1 MGP_129S1SvImJ_G0017255.1 mouse_genomes_project 10 58489200 58539368 + MGP_129S1SvImJ_P0025274 P4ha1 protein_coding protein_coding MGP_129S1SvImJ_T0025275.1 MGP_129S1SvImJ_G0017255.1 mouse_genomes_project 10 58489204 58539663 + MGP_129S1SvImJ_P0025275 P4ha1 protein_coding protein_coding MGP_129S1SvImJ_T0026862.1 MGP_129S1SvImJ_G0017647.1 mouse_genomes_project 10 94147261 94418090 - MGP_129S1SvImJ_P0026862 Cfap54 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0026863.1 MGP_129S1SvImJ_G0017647.1 mouse_genomes_project 10 94147261 94456176 - MGP_129S1SvImJ_P0026863 Cfap54 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0026864.1 MGP_129S1SvImJ_G0017647.1 mouse_genomes_project 10 94147269 94456198 - MGP_129S1SvImJ_P0026864 Cfap54 protein_coding protein_coding MGP_129S1SvImJ_T0026865.1 MGP_129S1SvImJ_G0017647.1 mouse_genomes_project 10 94168131 94201714 - MGP_129S1SvImJ_P0026865 Cfap54 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026866.1 MGP_129S1SvImJ_G0017647.1 mouse_genomes_project 10 94271440 94312394 - Cfap54 protein_coding processed_transcript MGP_129S1SvImJ_T0026867.1 MGP_129S1SvImJ_G0017647.1 mouse_genomes_project 10 94287954 94312402 - MGP_129S1SvImJ_P0026867 Cfap54 protein_coding protein_coding MGP_129S1SvImJ_T0026868.1 MGP_129S1SvImJ_G0017647.1 mouse_genomes_project 10 94345450 94413636 - MGP_129S1SvImJ_P0026868 Cfap54 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026869.1 MGP_129S1SvImJ_G0017647.1 mouse_genomes_project 10 94398624 94402011 - Cfap54 protein_coding processed_transcript MGP_129S1SvImJ_T0026870.1 MGP_129S1SvImJ_G0017647.1 mouse_genomes_project 10 94406101 94456198 - MGP_129S1SvImJ_P0026870 Cfap54 protein_coding protein_coding MGP_129S1SvImJ_T0026871.1 MGP_129S1SvImJ_G0017647.1 mouse_genomes_project 10 94414233 94456176 - MGP_129S1SvImJ_P0026871 Cfap54 protein_coding protein_coding MGP_129S1SvImJ_T0026872.1 MGP_129S1SvImJ_G0017647.1 mouse_genomes_project 10 94435504 94456198 - Cfap54 protein_coding retained_intron MGP_129S1SvImJ_T0026873.1 MGP_129S1SvImJ_G0017647.1 mouse_genomes_project 10 94441111 94444603 - Cfap54 protein_coding processed_transcript MGP_129S1SvImJ_T0027105.1 MGP_129S1SvImJ_G0017736.1 mouse_genomes_project 10 118042037 118065733 - MGP_129S1SvImJ_P0027105 Tmem19 protein_coding protein_coding MGP_129S1SvImJ_T0026803.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91082396 92236802 + MGP_129S1SvImJ_P0026803 protein_coding protein_coding MGP_129S1SvImJ_T0026804.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91082425 91755880 + MGP_129S1SvImJ_P0026804 protein_coding protein_coding MGP_129S1SvImJ_T0026805.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91082525 92232975 + MGP_129S1SvImJ_P0026805 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026806.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91082559 91933543 + MGP_129S1SvImJ_P0026806 protein_coding protein_coding MGP_129S1SvImJ_T0026807.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91215595 91257266 + protein_coding processed_transcript MGP_129S1SvImJ_T0026808.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91273733 91295330 + protein_coding processed_transcript MGP_129S1SvImJ_T0026809.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91295362 91303614 + MGP_129S1SvImJ_P0026809 protein_coding protein_coding MGP_129S1SvImJ_T0026810.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91826171 92239883 + MGP_129S1SvImJ_P0026810 protein_coding protein_coding MGP_129S1SvImJ_T0026811.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91826696 92185987 + MGP_129S1SvImJ_P0026811 protein_coding protein_coding MGP_129S1SvImJ_T0026812.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91826821 92236841 + MGP_129S1SvImJ_P0026812 protein_coding protein_coding MGP_129S1SvImJ_T0026813.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91826961 92238042 + MGP_129S1SvImJ_P0026813 protein_coding protein_coding MGP_129S1SvImJ_T0026814.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91827014 92238285 + MGP_129S1SvImJ_P0026814 protein_coding protein_coding MGP_129S1SvImJ_T0026815.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91827056 92236795 + MGP_129S1SvImJ_P0026815 protein_coding protein_coding MGP_129S1SvImJ_T0026816.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91827135 92237447 + MGP_129S1SvImJ_P0026816 protein_coding protein_coding MGP_129S1SvImJ_T0026817.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91827162 92238247 + MGP_129S1SvImJ_P0026817 protein_coding protein_coding MGP_129S1SvImJ_T0026818.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91827180 92238285 + MGP_129S1SvImJ_P0026818 protein_coding protein_coding MGP_129S1SvImJ_T0026819.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91827193 91850235 + protein_coding processed_transcript MGP_129S1SvImJ_T0026820.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91827194 91837433 + MGP_129S1SvImJ_P0026820 protein_coding protein_coding MGP_129S1SvImJ_T0026821.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91827210 91837580 + MGP_129S1SvImJ_P0026821 protein_coding protein_coding MGP_129S1SvImJ_T0026822.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91827245 92237562 + MGP_129S1SvImJ_P0026822 protein_coding protein_coding MGP_129S1SvImJ_T0026823.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91827259 92238574 + MGP_129S1SvImJ_P0026823 protein_coding protein_coding MGP_129S1SvImJ_T0026824.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91827409 92236802 + MGP_129S1SvImJ_P0026824 protein_coding protein_coding MGP_129S1SvImJ_T0026825.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 91827436 92236403 + MGP_129S1SvImJ_P0026825 protein_coding protein_coding MGP_129S1SvImJ_T0026826.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 92090514 92161099 + protein_coding processed_transcript MGP_129S1SvImJ_T0026827.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 92091968 92236795 + MGP_129S1SvImJ_P0026827 protein_coding protein_coding MGP_129S1SvImJ_T0026828.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 92092100 92238040 + MGP_129S1SvImJ_P0026828 protein_coding protein_coding MGP_129S1SvImJ_T0026829.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 92092315 92237867 + MGP_129S1SvImJ_P0026829 protein_coding protein_coding MGP_129S1SvImJ_T0026830.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 92092353 92178504 + protein_coding processed_transcript MGP_129S1SvImJ_T0026831.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 92092377 92186012 + protein_coding processed_transcript MGP_129S1SvImJ_T0026832.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 92158868 92188404 + MGP_129S1SvImJ_P0026832 protein_coding protein_coding MGP_129S1SvImJ_T0026833.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 92158879 92238040 + MGP_129S1SvImJ_P0026833 protein_coding protein_coding MGP_129S1SvImJ_T0026834.1 MGP_129S1SvImJ_G0017641.1 mouse_genomes_project 10 92158959 92236675 + MGP_129S1SvImJ_P0026834 protein_coding protein_coding MGP_129S1SvImJ_T0026166.1 MGP_129S1SvImJ_G0017482.1 mouse_genomes_project 10 80701020 80715658 + MGP_129S1SvImJ_P0026166 Stk11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026167.1 MGP_129S1SvImJ_G0017482.1 mouse_genomes_project 10 80701020 80715871 + MGP_129S1SvImJ_P0026167 Stk11 protein_coding protein_coding MGP_129S1SvImJ_T0026168.1 MGP_129S1SvImJ_G0017482.1 mouse_genomes_project 10 80701564 80715659 + MGP_129S1SvImJ_P0026168 Stk11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026169.1 MGP_129S1SvImJ_G0017482.1 mouse_genomes_project 10 80701571 80703032 + Stk11 protein_coding processed_transcript MGP_129S1SvImJ_T0026170.1 MGP_129S1SvImJ_G0017482.1 mouse_genomes_project 10 80701835 80717590 + MGP_129S1SvImJ_P0026170 Stk11 protein_coding protein_coding MGP_129S1SvImJ_T0026171.1 MGP_129S1SvImJ_G0017482.1 mouse_genomes_project 10 80710007 80715164 + Stk11 protein_coding retained_intron MGP_129S1SvImJ_T0026172.1 MGP_129S1SvImJ_G0017482.1 mouse_genomes_project 10 80710563 80711698 + Stk11 protein_coding retained_intron MGP_129S1SvImJ_T0026173.1 MGP_129S1SvImJ_G0017482.1 mouse_genomes_project 10 80711574 80713388 + Stk11 protein_coding retained_intron MGP_129S1SvImJ_T0026174.1 MGP_129S1SvImJ_G0017482.1 mouse_genomes_project 10 80711870 80715659 + MGP_129S1SvImJ_P0026174 Stk11 protein_coding protein_coding MGP_129S1SvImJ_T0024844.1 MGP_129S1SvImJ_G0017099.1 mouse_genomes_project 10 23561409 23569733 - MGP_129S1SvImJ_P0024844 Smlr1 protein_coding protein_coding MGP_129S1SvImJ_T0024845.1 MGP_129S1SvImJ_G0017099.1 mouse_genomes_project 10 23565717 23569608 - Smlr1 protein_coding retained_intron MGP_129S1SvImJ_T0099199.1 MGP_129S1SvImJ_G0037266.1 mouse_genomes_project 10 91697346 91697441 + Gm22602 snRNA snRNA MGP_129S1SvImJ_T0026768.1 MGP_129S1SvImJ_G0017630.1 mouse_genomes_project 10 89784631 89794101 - MGP_129S1SvImJ_P0026768 Spic protein_coding protein_coding MGP_129S1SvImJ_T0026769.1 MGP_129S1SvImJ_G0017630.1 mouse_genomes_project 10 89784924 89794101 - MGP_129S1SvImJ_P0026769 Spic protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026770.1 MGP_129S1SvImJ_G0017630.1 mouse_genomes_project 10 89785542 89795927 - MGP_129S1SvImJ_P0026770 Spic protein_coding protein_coding MGP_129S1SvImJ_T0026771.1 MGP_129S1SvImJ_G0017630.1 mouse_genomes_project 10 89788577 89794101 - Spic protein_coding retained_intron MGP_129S1SvImJ_T0012408.1 MGP_129S1SvImJ_G0010497.1 mouse_genomes_project 10 18391188 18395130 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0027455.1 MGP_129S1SvImJ_G0017850.1 mouse_genomes_project 10 131898205 131914471 + MGP_129S1SvImJ_P0027455 Gls2 protein_coding protein_coding MGP_129S1SvImJ_T0027456.1 MGP_129S1SvImJ_G0017850.1 mouse_genomes_project 10 131899415 131903822 + MGP_129S1SvImJ_P0027456 Gls2 protein_coding protein_coding MGP_129S1SvImJ_T0027457.1 MGP_129S1SvImJ_G0017850.1 mouse_genomes_project 10 131899497 131914466 + MGP_129S1SvImJ_P0027457 Gls2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027458.1 MGP_129S1SvImJ_G0017850.1 mouse_genomes_project 10 131899500 131904202 + Gls2 protein_coding processed_transcript MGP_129S1SvImJ_T0027459.1 MGP_129S1SvImJ_G0017850.1 mouse_genomes_project 10 131899504 131914536 + MGP_129S1SvImJ_P0027459 Gls2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027460.1 MGP_129S1SvImJ_G0017850.1 mouse_genomes_project 10 131899526 131914466 + MGP_129S1SvImJ_P0027460 Gls2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027461.1 MGP_129S1SvImJ_G0017850.1 mouse_genomes_project 10 131899584 131904360 + Gls2 protein_coding retained_intron MGP_129S1SvImJ_T0027462.1 MGP_129S1SvImJ_G0017850.1 mouse_genomes_project 10 131907798 131908725 + Gls2 protein_coding retained_intron MGP_129S1SvImJ_T0027463.1 MGP_129S1SvImJ_G0017850.1 mouse_genomes_project 10 131908216 131911537 + Gls2 protein_coding processed_transcript MGP_129S1SvImJ_T0027464.1 MGP_129S1SvImJ_G0017850.1 mouse_genomes_project 10 131908297 131914474 + Gls2 protein_coding retained_intron MGP_129S1SvImJ_T0027465.1 MGP_129S1SvImJ_G0017850.1 mouse_genomes_project 10 131911458 131914262 + MGP_129S1SvImJ_P0027465 Gls2 protein_coding protein_coding MGP_129S1SvImJ_T0011302.1 MGP_129S1SvImJ_G0009418.1 mouse_genomes_project 10 93468848 93468956 - Gm27366 misc_RNA misc_RNA MGP_129S1SvImJ_T0026891.1 MGP_129S1SvImJ_G0017654.1 mouse_genomes_project 10 95007626 95014117 - MGP_129S1SvImJ_P0026891 Snrpf protein_coding protein_coding MGP_129S1SvImJ_T0025169.1 MGP_129S1SvImJ_G0017212.1 mouse_genomes_project 10 49661809 49944869 + MGP_129S1SvImJ_P0025169 Ascc3 protein_coding protein_coding MGP_129S1SvImJ_T0025170.1 MGP_129S1SvImJ_G0017212.1 mouse_genomes_project 10 49661834 49944870 + MGP_129S1SvImJ_P0025170 Ascc3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0026085.1 MGP_129S1SvImJ_G0017463.1 mouse_genomes_project 10 80410842 80415950 + protein_coding retained_intron MGP_129S1SvImJ_T0026086.1 MGP_129S1SvImJ_G0017463.1 mouse_genomes_project 10 80410870 80419678 + protein_coding retained_intron MGP_129S1SvImJ_T0026087.1 MGP_129S1SvImJ_G0017463.1 mouse_genomes_project 10 80410878 80415851 + protein_coding processed_transcript MGP_129S1SvImJ_T0026088.1 MGP_129S1SvImJ_G0017463.1 mouse_genomes_project 10 80410889 80419662 + MGP_129S1SvImJ_P0026088 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026089.1 MGP_129S1SvImJ_G0017463.1 mouse_genomes_project 10 80410902 80415252 + MGP_129S1SvImJ_P0026089 protein_coding protein_coding MGP_129S1SvImJ_T0026090.1 MGP_129S1SvImJ_G0017463.1 mouse_genomes_project 10 80410904 80415282 + protein_coding processed_transcript MGP_129S1SvImJ_T0026091.1 MGP_129S1SvImJ_G0017463.1 mouse_genomes_project 10 80410904 80415602 + MGP_129S1SvImJ_P0026091 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026092.1 MGP_129S1SvImJ_G0017463.1 mouse_genomes_project 10 80410951 80419515 + MGP_129S1SvImJ_P0026092 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0026093.1 MGP_129S1SvImJ_G0017463.1 mouse_genomes_project 10 80411275 80415334 + MGP_129S1SvImJ_P0026093 protein_coding protein_coding MGP_129S1SvImJ_T0026094.1 MGP_129S1SvImJ_G0017463.1 mouse_genomes_project 10 80415009 80415625 + MGP_129S1SvImJ_P0026094 protein_coding protein_coding MGP_129S1SvImJ_T0026095.1 MGP_129S1SvImJ_G0017463.1 mouse_genomes_project 10 80415231 80416363 + protein_coding retained_intron MGP_129S1SvImJ_T0026096.1 MGP_129S1SvImJ_G0017463.1 mouse_genomes_project 10 80415887 80419291 + MGP_129S1SvImJ_P0026096 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026098.1 MGP_129S1SvImJ_G0017463.1 mouse_genomes_project 10 80417975 80419288 + protein_coding retained_intron MGP_129S1SvImJ_T0003085.1 MGP_129S1SvImJ_G0002882.1 mouse_genomes_project 10 82304354 82307763 - Gm15917 antisense antisense MGP_129S1SvImJ_T0027246.1 MGP_129S1SvImJ_G0017781.1 mouse_genomes_project 10 124621674 124653589 + MGP_129S1SvImJ_P0027246 Gns protein_coding protein_coding MGP_129S1SvImJ_T0025508.1 MGP_129S1SvImJ_G0017314.1 mouse_genomes_project 10 62755134 62837993 + MGP_129S1SvImJ_P0025508 Herc4 protein_coding protein_coding MGP_129S1SvImJ_T0025509.1 MGP_129S1SvImJ_G0017314.1 mouse_genomes_project 10 62755282 62837982 + MGP_129S1SvImJ_P0025509 Herc4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0011298.1 MGP_129S1SvImJ_G0009414.1 mouse_genomes_project 10 93409641 93409803 - Gm27608 misc_RNA misc_RNA MGP_129S1SvImJ_T0009593.1 MGP_129S1SvImJ_G0007709.1 mouse_genomes_project 10 51178723 51178860 + Gm24084 miRNA miRNA MGP_129S1SvImJ_T0017124.1 MGP_129S1SvImJ_G0015129.1 mouse_genomes_project 10 1402597 1418930 + Gm16153 processed_transcript processed_transcript MGP_129S1SvImJ_T0024930.1 MGP_129S1SvImJ_G0017136.1 mouse_genomes_project 10 32463627 32465531 - MGP_129S1SvImJ_P0024930 Fam26f protein_coding protein_coding MGP_129S1SvImJ_T0025992.1 MGP_129S1SvImJ_G0017421.1 mouse_genomes_project 10 78842750 78856751 - MGP_129S1SvImJ_P0025992 Rrp1 protein_coding protein_coding MGP_129S1SvImJ_T0009595.1 MGP_129S1SvImJ_G0007711.1 mouse_genomes_project 10 59346708 59346766 + Mir6906 miRNA miRNA MGP_129S1SvImJ_T0024454.1 MGP_129S1SvImJ_G0016989.1 mouse_genomes_project 10 3862512 3885333 - MGP_129S1SvImJ_P0024454 Gm10945 protein_coding protein_coding MGP_129S1SvImJ_T0026633.1 MGP_129S1SvImJ_G0017589.1 mouse_genomes_project 10 84543195 84592006 + MGP_129S1SvImJ_P0026633 1500009L16Rik protein_coding protein_coding MGP_129S1SvImJ_T0027234.1 MGP_129S1SvImJ_G0017774.1 mouse_genomes_project 10 123378570 123382795 + MGP_129S1SvImJ_P0027234 protein_coding protein_coding MGP_129S1SvImJ_T0012432.1 MGP_129S1SvImJ_G0010521.1 mouse_genomes_project 10 58892360 58892609 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0027631.1 MGP_129S1SvImJ_G0017939.1 mouse_genomes_project 10 133875068 133876025 - MGP_129S1SvImJ_P0027631 Olfr818 protein_coding protein_coding MGP_129S1SvImJ_T0027632.1 MGP_129S1SvImJ_G0017939.1 mouse_genomes_project 10 133875310 133879050 - MGP_129S1SvImJ_P0027632 Olfr818 protein_coding protein_coding MGP_129S1SvImJ_T0026018.1 MGP_129S1SvImJ_G0017438.1 mouse_genomes_project 10 79503566 79504646 + MGP_129S1SvImJ_P0026018 Olfr57 protein_coding protein_coding MGP_129S1SvImJ_T0012423.1 MGP_129S1SvImJ_G0010512.1 mouse_genomes_project 10 42086694 42087049 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0024503.1 MGP_129S1SvImJ_G0016995.1 mouse_genomes_project 10 4843257 4884139 - MGP_129S1SvImJ_P0024503 Pcmt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024504.1 MGP_129S1SvImJ_G0016995.1 mouse_genomes_project 10 4843257 4884483 - MGP_129S1SvImJ_P0024504 Pcmt1 protein_coding protein_coding MGP_129S1SvImJ_T0024505.1 MGP_129S1SvImJ_G0016995.1 mouse_genomes_project 10 4843265 4884178 - MGP_129S1SvImJ_P0024505 Pcmt1 protein_coding protein_coding MGP_129S1SvImJ_T0024506.1 MGP_129S1SvImJ_G0016995.1 mouse_genomes_project 10 4848970 4860685 - MGP_129S1SvImJ_P0024506 Pcmt1 protein_coding protein_coding MGP_129S1SvImJ_T0024507.1 MGP_129S1SvImJ_G0016995.1 mouse_genomes_project 10 4848970 4884136 - MGP_129S1SvImJ_P0024507 Pcmt1 protein_coding protein_coding MGP_129S1SvImJ_T0024508.1 MGP_129S1SvImJ_G0016995.1 mouse_genomes_project 10 4850891 4884483 - Pcmt1 protein_coding retained_intron MGP_129S1SvImJ_T0024509.1 MGP_129S1SvImJ_G0016995.1 mouse_genomes_project 10 4855559 4901943 - MGP_129S1SvImJ_P0024509 Pcmt1 protein_coding protein_coding MGP_129S1SvImJ_T0024510.1 MGP_129S1SvImJ_G0016995.1 mouse_genomes_project 10 4859124 4862796 - MGP_129S1SvImJ_P0024510 Pcmt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024511.1 MGP_129S1SvImJ_G0016995.1 mouse_genomes_project 10 4859149 4901937 - MGP_129S1SvImJ_P0024511 Pcmt1 protein_coding protein_coding MGP_129S1SvImJ_T0024512.1 MGP_129S1SvImJ_G0016995.1 mouse_genomes_project 10 4860494 4884139 - Pcmt1 protein_coding retained_intron MGP_129S1SvImJ_T0100463.1 MGP_129S1SvImJ_G0038530.1 mouse_genomes_project 10 130387512 130387650 - Gm24179 snoRNA snoRNA MGP_129S1SvImJ_T0026047.1 MGP_129S1SvImJ_G0017449.1 mouse_genomes_project 10 80175864 80181265 - MGP_129S1SvImJ_P0026047 Odf3l2 protein_coding protein_coding MGP_129S1SvImJ_T0025213.1 MGP_129S1SvImJ_G0017233.1 mouse_genomes_project 10 53096721 53280434 - MGP_129S1SvImJ_P0025213 Man1a protein_coding protein_coding MGP_129S1SvImJ_T0025214.1 MGP_129S1SvImJ_G0017233.1 mouse_genomes_project 10 53098948 53280347 - MGP_129S1SvImJ_P0025214 Man1a protein_coding protein_coding MGP_129S1SvImJ_T0025215.1 MGP_129S1SvImJ_G0017233.1 mouse_genomes_project 10 53171239 53280347 - Man1a protein_coding retained_intron MGP_129S1SvImJ_T0025216.1 MGP_129S1SvImJ_G0017233.1 mouse_genomes_project 10 53205176 53280374 - MGP_129S1SvImJ_P0025216 Man1a protein_coding protein_coding MGP_129S1SvImJ_T0025217.1 MGP_129S1SvImJ_G0017233.1 mouse_genomes_project 10 53213305 53280375 - Man1a protein_coding retained_intron MGP_129S1SvImJ_T0024894.1 MGP_129S1SvImJ_G0017117.1 mouse_genomes_project 10 28817094 28827433 - MGP_129S1SvImJ_P0024894 Hint3 protein_coding protein_coding MGP_129S1SvImJ_T0024895.1 MGP_129S1SvImJ_G0017117.1 mouse_genomes_project 10 28817302 28827287 - MGP_129S1SvImJ_P0024895 Hint3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024896.1 MGP_129S1SvImJ_G0017117.1 mouse_genomes_project 10 28817336 28827291 - MGP_129S1SvImJ_P0024896 Hint3 protein_coding protein_coding MGP_129S1SvImJ_T0027248.1 MGP_129S1SvImJ_G0017783.1 mouse_genomes_project 10 124820349 124871860 - MGP_129S1SvImJ_P0027248 Tbk1 protein_coding protein_coding MGP_129S1SvImJ_T0003028.1 MGP_129S1SvImJ_G0002837.1 mouse_genomes_project 10 8583995 8584695 - Gm16577 antisense antisense MGP_129S1SvImJ_T0027539.1 MGP_129S1SvImJ_G0017880.1 mouse_genomes_project 10 132492786 132533569 - MGP_129S1SvImJ_P0027539 Dgka protein_coding protein_coding MGP_129S1SvImJ_T0009610.1 MGP_129S1SvImJ_G0007726.1 mouse_genomes_project 10 78983942 78984064 + Gm27541 miRNA miRNA MGP_129S1SvImJ_T0011296.1 MGP_129S1SvImJ_G0009412.1 mouse_genomes_project 10 93404021 93404176 - Gm27544 misc_RNA misc_RNA MGP_129S1SvImJ_T0003064.1 MGP_129S1SvImJ_G0002865.1 mouse_genomes_project 10 71050472 71051248 + Gm15647 antisense antisense MGP_129S1SvImJ_T0100418.1 MGP_129S1SvImJ_G0038485.1 mouse_genomes_project 10 21708434 21708508 - Gm23130 snoRNA snoRNA MGP_129S1SvImJ_T0026385.1 MGP_129S1SvImJ_G0017536.1 mouse_genomes_project 10 81793140 81816680 + MGP_129S1SvImJ_P0026385 Map2k2 protein_coding protein_coding MGP_129S1SvImJ_T0026386.1 MGP_129S1SvImJ_G0017536.1 mouse_genomes_project 10 81793172 81815866 + MGP_129S1SvImJ_P0026386 Map2k2 protein_coding protein_coding MGP_129S1SvImJ_T0026387.1 MGP_129S1SvImJ_G0017536.1 mouse_genomes_project 10 81793197 81815828 + MGP_129S1SvImJ_P0026387 Map2k2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0026388.1 MGP_129S1SvImJ_G0017536.1 mouse_genomes_project 10 81793570 81811108 + MGP_129S1SvImJ_P0026388 Map2k2 protein_coding protein_coding MGP_129S1SvImJ_T0026389.1 MGP_129S1SvImJ_G0017536.1 mouse_genomes_project 10 81810594 81811310 + Map2k2 protein_coding retained_intron MGP_129S1SvImJ_T0026390.1 MGP_129S1SvImJ_G0017536.1 mouse_genomes_project 10 81812836 81814545 + Map2k2 protein_coding retained_intron MGP_129S1SvImJ_T0026391.1 MGP_129S1SvImJ_G0017536.1 mouse_genomes_project 10 81814142 81815910 + Map2k2 protein_coding retained_intron MGP_129S1SvImJ_T0025855.1 MGP_129S1SvImJ_G0017390.1 mouse_genomes_project 10 77025466 77091561 - MGP_129S1SvImJ_P0025855 Pcbp3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0025856.1 MGP_129S1SvImJ_G0017390.1 mouse_genomes_project 10 77025471 77232669 - MGP_129S1SvImJ_P0025856 Pcbp3 protein_coding protein_coding MGP_129S1SvImJ_T0025857.1 MGP_129S1SvImJ_G0017390.1 mouse_genomes_project 10 77025472 77086383 - Pcbp3 protein_coding processed_transcript MGP_129S1SvImJ_T0025858.1 MGP_129S1SvImJ_G0017390.1 mouse_genomes_project 10 77025472 77090506 - MGP_129S1SvImJ_P0025858 Pcbp3 protein_coding protein_coding MGP_129S1SvImJ_T0025859.1 MGP_129S1SvImJ_G0017390.1 mouse_genomes_project 10 77025474 77232768 - MGP_129S1SvImJ_P0025859 Pcbp3 protein_coding protein_coding MGP_129S1SvImJ_T0025860.1 MGP_129S1SvImJ_G0017390.1 mouse_genomes_project 10 77025846 77061468 - Pcbp3 protein_coding processed_transcript MGP_129S1SvImJ_T0025861.1 MGP_129S1SvImJ_G0017390.1 mouse_genomes_project 10 77025984 77052026 - MGP_129S1SvImJ_P0025861 Pcbp3 protein_coding protein_coding MGP_129S1SvImJ_T0025862.1 MGP_129S1SvImJ_G0017390.1 mouse_genomes_project 10 77026919 77080305 - MGP_129S1SvImJ_P0025862 Pcbp3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025863.1 MGP_129S1SvImJ_G0017390.1 mouse_genomes_project 10 77053406 77173581 - Pcbp3 protein_coding processed_transcript MGP_129S1SvImJ_T0025864.1 MGP_129S1SvImJ_G0017390.1 mouse_genomes_project 10 77061451 77082993 - Pcbp3 protein_coding processed_transcript MGP_129S1SvImJ_T0024419.1 MGP_129S1SvImJ_G0016979.1 mouse_genomes_project 10 1428273 1435583 + MGP_129S1SvImJ_P0024419 Armt1 protein_coding protein_coding MGP_129S1SvImJ_T0024420.1 MGP_129S1SvImJ_G0016979.1 mouse_genomes_project 10 1428280 1446580 + Armt1 protein_coding processed_transcript MGP_129S1SvImJ_T0024421.1 MGP_129S1SvImJ_G0016979.1 mouse_genomes_project 10 1428288 1430753 + Armt1 protein_coding retained_intron MGP_129S1SvImJ_T0024422.1 MGP_129S1SvImJ_G0016979.1 mouse_genomes_project 10 1428293 1452437 + MGP_129S1SvImJ_P0024422 Armt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024423.1 MGP_129S1SvImJ_G0016979.1 mouse_genomes_project 10 1428324 1453594 + MGP_129S1SvImJ_P0024423 Armt1 protein_coding protein_coding MGP_129S1SvImJ_T0024424.1 MGP_129S1SvImJ_G0016979.1 mouse_genomes_project 10 1430159 1436138 + Armt1 protein_coding processed_transcript MGP_129S1SvImJ_T0012421.1 MGP_129S1SvImJ_G0010510.1 mouse_genomes_project 10 41027727 41028205 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009632.1 MGP_129S1SvImJ_G0007748.1 mouse_genomes_project 10 98533633 98533722 - Gm24587 miRNA miRNA MGP_129S1SvImJ_T0009623.1 MGP_129S1SvImJ_G0007739.1 mouse_genomes_project 10 86244963 86245067 + Gm25281 miRNA miRNA MGP_129S1SvImJ_T0003072.1 MGP_129S1SvImJ_G0002872.1 mouse_genomes_project 10 76817148 76822668 - Gm15343 antisense antisense MGP_129S1SvImJ_T0006087.1 MGP_129S1SvImJ_G0005098.1 mouse_genomes_project 10 6796042 6800197 - Gm28904 lincRNA lincRNA MGP_129S1SvImJ_T0025526.1 MGP_129S1SvImJ_G0017320.1 mouse_genomes_project 10 63472669 63645916 - MGP_129S1SvImJ_P0025526 Lrrtm3 protein_coding protein_coding MGP_129S1SvImJ_T0025527.1 MGP_129S1SvImJ_G0017320.1 mouse_genomes_project 10 63474087 63645919 - Lrrtm3 protein_coding processed_transcript MGP_129S1SvImJ_T0025528.1 MGP_129S1SvImJ_G0017320.1 mouse_genomes_project 10 63643137 63645889 - Lrrtm3 protein_coding retained_intron MGP_129S1SvImJ_T0025529.1 MGP_129S1SvImJ_G0017320.1 mouse_genomes_project 10 63644695 63645892 - MGP_129S1SvImJ_P0025529 Lrrtm3 protein_coding protein_coding MGP_129S1SvImJ_T0025405.1 MGP_129S1SvImJ_G0017290.1 mouse_genomes_project 10 61460044 61461574 + MGP_129S1SvImJ_P0025405 protein_coding protein_coding MGP_129S1SvImJ_T0027630.1 MGP_129S1SvImJ_G0017938.1 mouse_genomes_project 10 133841850 133842789 - MGP_129S1SvImJ_P0027630 Olfr816 protein_coding protein_coding MGP_129S1SvImJ_T0026132.1 MGP_129S1SvImJ_G0017473.1 mouse_genomes_project 10 80531520 80540617 + MGP_129S1SvImJ_P0026132 Wdr18 protein_coding protein_coding MGP_129S1SvImJ_T0024715.1 MGP_129S1SvImJ_G0017050.1 mouse_genomes_project 10 17586493 17636000 - MGP_129S1SvImJ_P0024715 Pex7 protein_coding protein_coding MGP_129S1SvImJ_T0024716.1 MGP_129S1SvImJ_G0017050.1 mouse_genomes_project 10 17586661 17635985 - MGP_129S1SvImJ_P0024716 Pex7 protein_coding protein_coding MGP_129S1SvImJ_T0024717.1 MGP_129S1SvImJ_G0017050.1 mouse_genomes_project 10 17587353 17597127 - Pex7 protein_coding retained_intron MGP_129S1SvImJ_T0024718.1 MGP_129S1SvImJ_G0017050.1 mouse_genomes_project 10 17613095 17635856 - MGP_129S1SvImJ_P0024718 Pex7 protein_coding protein_coding MGP_129S1SvImJ_T0003046.1 MGP_129S1SvImJ_G0002850.1 mouse_genomes_project 10 40196600 40199391 + Gm17196 antisense antisense MGP_129S1SvImJ_T0099164.1 MGP_129S1SvImJ_G0037231.1 mouse_genomes_project 10 27528036 27528143 + Gm25596 snRNA snRNA MGP_129S1SvImJ_T0025087.1 MGP_129S1SvImJ_G0017184.1 mouse_genomes_project 10 41009520 41191344 - MGP_129S1SvImJ_P0025087 Lace1 protein_coding protein_coding MGP_129S1SvImJ_T0025088.1 MGP_129S1SvImJ_G0017184.1 mouse_genomes_project 10 41009528 41191358 - MGP_129S1SvImJ_P0025088 Lace1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025089.1 MGP_129S1SvImJ_G0017184.1 mouse_genomes_project 10 41010522 41128523 - MGP_129S1SvImJ_P0025089 Lace1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024557.1 MGP_129S1SvImJ_G0017008.1 mouse_genomes_project 10 7686574 7817249 - MGP_129S1SvImJ_P0024557 protein_coding protein_coding MGP_129S1SvImJ_T0024558.1 MGP_129S1SvImJ_G0017008.1 mouse_genomes_project 10 7686580 7817232 - MGP_129S1SvImJ_P0024558 protein_coding protein_coding MGP_129S1SvImJ_T0024559.1 MGP_129S1SvImJ_G0017008.1 mouse_genomes_project 10 7686580 7765717 - MGP_129S1SvImJ_P0024559 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0024560.1 MGP_129S1SvImJ_G0017008.1 mouse_genomes_project 10 7686809 7817220 - MGP_129S1SvImJ_P0024560 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0024561.1 MGP_129S1SvImJ_G0017008.1 mouse_genomes_project 10 7753867 7777853 - MGP_129S1SvImJ_P0024561 protein_coding protein_coding MGP_129S1SvImJ_T0024562.1 MGP_129S1SvImJ_G0017008.1 mouse_genomes_project 10 7754525 7817232 - MGP_129S1SvImJ_P0024562 protein_coding protein_coding MGP_129S1SvImJ_T0026004.1 MGP_129S1SvImJ_G0017431.1 mouse_genomes_project 10 79309852 79310815 - MGP_129S1SvImJ_P0026004 Olfr1356 protein_coding protein_coding MGP_129S1SvImJ_T0026005.1 MGP_129S1SvImJ_G0017431.1 mouse_genomes_project 10 79309852 79315068 - MGP_129S1SvImJ_P0026005 Olfr1356 protein_coding protein_coding MGP_129S1SvImJ_T0000842.1 MGP_129S1SvImJ_G0000776.1 mouse_genomes_project 10 62604497 62604839 + TEC TEC MGP_129S1SvImJ_T0024758.1 MGP_129S1SvImJ_G0017062.1 mouse_genomes_project 10 19404087 19434588 + MGP_129S1SvImJ_P0024758 1700020N01Rik protein_coding protein_coding MGP_129S1SvImJ_T0024759.1 MGP_129S1SvImJ_G0017062.1 mouse_genomes_project 10 19427349 19433977 + 1700020N01Rik protein_coding processed_transcript MGP_129S1SvImJ_T0027526.1 MGP_129S1SvImJ_G0017875.1 mouse_genomes_project 10 132391083 132406152 - MGP_129S1SvImJ_P0027526 Ikzf4 protein_coding protein_coding MGP_129S1SvImJ_T0027527.1 MGP_129S1SvImJ_G0017875.1 mouse_genomes_project 10 132392601 132405987 - MGP_129S1SvImJ_P0027527 Ikzf4 protein_coding protein_coding MGP_129S1SvImJ_T0027528.1 MGP_129S1SvImJ_G0017875.1 mouse_genomes_project 10 132392654 132406005 - MGP_129S1SvImJ_P0027528 Ikzf4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027529.1 MGP_129S1SvImJ_G0017875.1 mouse_genomes_project 10 132393899 132404809 - MGP_129S1SvImJ_P0027529 Ikzf4 protein_coding protein_coding MGP_129S1SvImJ_T0027530.1 MGP_129S1SvImJ_G0017875.1 mouse_genomes_project 10 132400426 132405957 - MGP_129S1SvImJ_P0027530 Ikzf4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027531.1 MGP_129S1SvImJ_G0017875.1 mouse_genomes_project 10 132401342 132405951 - MGP_129S1SvImJ_P0027531 Ikzf4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027532.1 MGP_129S1SvImJ_G0017875.1 mouse_genomes_project 10 132401368 132405968 - MGP_129S1SvImJ_P0027532 Ikzf4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027533.1 MGP_129S1SvImJ_G0017875.1 mouse_genomes_project 10 132404598 132405987 - Ikzf4 protein_coding processed_transcript MGP_129S1SvImJ_T0027643.1 MGP_129S1SvImJ_G0017949.1 mouse_genomes_project 10 134282304 134326028 + MGP_129S1SvImJ_P0027643 Tespa1 protein_coding protein_coding MGP_129S1SvImJ_T0099198.1 MGP_129S1SvImJ_G0037265.1 mouse_genomes_project 10 91025921 91026028 - Gm26180 snRNA snRNA MGP_129S1SvImJ_T0003057.1 MGP_129S1SvImJ_G0002859.1 mouse_genomes_project 10 62018695 62020071 + 4933428P19Rik antisense antisense MGP_129S1SvImJ_T0026016.1 MGP_129S1SvImJ_G0017437.1 mouse_genomes_project 10 79480488 79486201 + MGP_129S1SvImJ_P0026016 Olfr1351 protein_coding protein_coding MGP_129S1SvImJ_T0026017.1 MGP_129S1SvImJ_G0017437.1 mouse_genomes_project 10 79485241 79486201 + MGP_129S1SvImJ_P0026017 Olfr1351 protein_coding protein_coding MGP_129S1SvImJ_T0024809.1 MGP_129S1SvImJ_G0017090.1 mouse_genomes_project 10 22103567 22145467 + MGP_129S1SvImJ_P0024809 Stx7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0027306.1 MGP_129S1SvImJ_G0017802.1 mouse_genomes_project 10 130624335 130629055 + MGP_129S1SvImJ_P0027306 Cyp27b1 protein_coding protein_coding MGP_129S1SvImJ_T0027307.1 MGP_129S1SvImJ_G0017802.1 mouse_genomes_project 10 130624335 130629092 + MGP_129S1SvImJ_P0027307 Cyp27b1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027308.1 MGP_129S1SvImJ_G0017802.1 mouse_genomes_project 10 130624756 130625952 + Cyp27b1 protein_coding processed_transcript MGP_129S1SvImJ_T0026922.1 MGP_129S1SvImJ_G0017660.1 mouse_genomes_project 10 95486979 95609487 + MGP_129S1SvImJ_P0026922 Fgd6 protein_coding protein_coding MGP_129S1SvImJ_T0026923.1 MGP_129S1SvImJ_G0017660.1 mouse_genomes_project 10 95528732 95548574 + Fgd6 protein_coding processed_transcript MGP_129S1SvImJ_T0026924.1 MGP_129S1SvImJ_G0017660.1 mouse_genomes_project 10 95595250 95603986 + Fgd6 protein_coding retained_intron MGP_129S1SvImJ_T0100464.1 MGP_129S1SvImJ_G0038531.1 mouse_genomes_project 10 131613283 131613414 - Gm23996 snoRNA snoRNA MGP_129S1SvImJ_T0099210.1 MGP_129S1SvImJ_G0037277.1 mouse_genomes_project 10 113518449 113518552 - Gm22101 snRNA snRNA MGP_129S1SvImJ_T0025276.1 MGP_129S1SvImJ_G0017256.1 mouse_genomes_project 10 58567335 58587403 + MGP_129S1SvImJ_P0025276 Pla2g12b protein_coding protein_coding MGP_129S1SvImJ_T0025277.1 MGP_129S1SvImJ_G0017256.1 mouse_genomes_project 10 58574694 58587397 + MGP_129S1SvImJ_P0025277 Pla2g12b protein_coding protein_coding MGP_129S1SvImJ_T0025382.1 MGP_129S1SvImJ_G0017282.1 mouse_genomes_project 10 60824989 60940479 + MGP_129S1SvImJ_P0025382 Lrrc20 protein_coding protein_coding MGP_129S1SvImJ_T0026496.1 MGP_129S1SvImJ_G0017561.1 mouse_genomes_project 10 82212043 82222187 - MGP_129S1SvImJ_P0026496 Ncln protein_coding protein_coding MGP_129S1SvImJ_T0026497.1 MGP_129S1SvImJ_G0017561.1 mouse_genomes_project 10 82212251 82222121 - MGP_129S1SvImJ_P0026497 Ncln protein_coding protein_coding MGP_129S1SvImJ_T0026498.1 MGP_129S1SvImJ_G0017561.1 mouse_genomes_project 10 82212892 82214192 - Ncln protein_coding retained_intron MGP_129S1SvImJ_T0026499.1 MGP_129S1SvImJ_G0017561.1 mouse_genomes_project 10 82213084 82214012 - MGP_129S1SvImJ_P0026499 Ncln protein_coding protein_coding MGP_129S1SvImJ_T0026500.1 MGP_129S1SvImJ_G0017561.1 mouse_genomes_project 10 82213134 82214438 - Ncln protein_coding retained_intron MGP_129S1SvImJ_T0026501.1 MGP_129S1SvImJ_G0017561.1 mouse_genomes_project 10 82213174 82214436 - Ncln protein_coding retained_intron MGP_129S1SvImJ_T0026502.1 MGP_129S1SvImJ_G0017561.1 mouse_genomes_project 10 82214020 82216063 - Ncln protein_coding retained_intron MGP_129S1SvImJ_T0026503.1 MGP_129S1SvImJ_G0017561.1 mouse_genomes_project 10 82216719 82217850 - Ncln protein_coding retained_intron MGP_129S1SvImJ_T0026504.1 MGP_129S1SvImJ_G0017561.1 mouse_genomes_project 10 82219117 82222137 - Ncln protein_coding retained_intron MGP_129S1SvImJ_T0009617.1 MGP_129S1SvImJ_G0007733.1 mouse_genomes_project 10 81791841 81791901 + Mir5615-2 miRNA miRNA MGP_129S1SvImJ_T0024726.1 MGP_129S1SvImJ_G0017052.1 mouse_genomes_project 10 17883513 18018179 + MGP_129S1SvImJ_P0024726 Map7 protein_coding protein_coding MGP_129S1SvImJ_T0024727.1 MGP_129S1SvImJ_G0017052.1 mouse_genomes_project 10 17883962 18021069 + MGP_129S1SvImJ_P0024727 Map7 protein_coding protein_coding MGP_129S1SvImJ_T0006127.1 MGP_129S1SvImJ_G0005129.1 mouse_genomes_project 10 71298965 71302194 + Gm20609 lincRNA lincRNA MGP_129S1SvImJ_T0025418.1 MGP_129S1SvImJ_G0017293.1 mouse_genomes_project 10 61584927 61639795 - MGP_129S1SvImJ_P0025418 Tspan15 protein_coding protein_coding MGP_129S1SvImJ_T0027075.1 MGP_129S1SvImJ_G0017720.1 mouse_genomes_project 10 113699238 113702296 + MGP_129S1SvImJ_P0027075 Bbs10 protein_coding protein_coding MGP_129S1SvImJ_T0100408.1 MGP_129S1SvImJ_G0038475.1 mouse_genomes_project 10 8025358 8025489 + Gm23601 snoRNA snoRNA MGP_129S1SvImJ_T0025190.1 MGP_129S1SvImJ_G0017223.1 mouse_genomes_project 10 51489958 51539236 - MGP_129S1SvImJ_P0025190 Gopc protein_coding protein_coding MGP_129S1SvImJ_T0025191.1 MGP_129S1SvImJ_G0017223.1 mouse_genomes_project 10 51489958 51539236 - MGP_129S1SvImJ_P0025191 Gopc protein_coding protein_coding MGP_129S1SvImJ_T0025192.1 MGP_129S1SvImJ_G0017223.1 mouse_genomes_project 10 51492657 51539010 - MGP_129S1SvImJ_P0025192 Gopc protein_coding unknown_likely_coding MGP_129S1SvImJ_T0027220.1 MGP_129S1SvImJ_G0017772.1 mouse_genomes_project 10 123277620 123345355 - MGP_129S1SvImJ_P0027220 Irak3 protein_coding protein_coding MGP_129S1SvImJ_T0027221.1 MGP_129S1SvImJ_G0017772.1 mouse_genomes_project 10 123278141 123345394 - MGP_129S1SvImJ_P0027221 Irak3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027222.1 MGP_129S1SvImJ_G0017772.1 mouse_genomes_project 10 123302352 123313767 - Irak3 protein_coding processed_transcript MGP_129S1SvImJ_T0027223.1 MGP_129S1SvImJ_G0017772.1 mouse_genomes_project 10 123307267 123345483 - Irak3 protein_coding retained_intron MGP_129S1SvImJ_T0026698.1 MGP_129S1SvImJ_G0017613.1 mouse_genomes_project 10 87685598 87762401 + MGP_129S1SvImJ_P0026698 Ttc41 protein_coding protein_coding MGP_129S1SvImJ_T0026699.1 MGP_129S1SvImJ_G0017613.1 mouse_genomes_project 10 87685598 87705204 + MGP_129S1SvImJ_P0026699 Ttc41 protein_coding protein_coding MGP_129S1SvImJ_T0027484.1 MGP_129S1SvImJ_G0017856.1 mouse_genomes_project 10 131985921 132011423 + MGP_129S1SvImJ_P0027484 Stat2 protein_coding protein_coding MGP_129S1SvImJ_T0027485.1 MGP_129S1SvImJ_G0017856.1 mouse_genomes_project 10 131985921 132011423 + MGP_129S1SvImJ_P0027485 Stat2 protein_coding protein_coding MGP_129S1SvImJ_T0099159.1 MGP_129S1SvImJ_G0037226.1 mouse_genomes_project 10 11335595 11335702 - Gm22995 snRNA snRNA MGP_129S1SvImJ_T0025565.1 MGP_129S1SvImJ_G0017331.1 mouse_genomes_project 10 68563323 68619140 + MGP_129S1SvImJ_P0025565 Tmem26 protein_coding protein_coding MGP_129S1SvImJ_T0027163.1 MGP_129S1SvImJ_G0017757.1 mouse_genomes_project 10 120164477 120186569 - MGP_129S1SvImJ_P0027163 protein_coding protein_coding MGP_129S1SvImJ_T0025093.1 MGP_129S1SvImJ_G0017186.1 mouse_genomes_project 10 41285369 41290923 - MGP_129S1SvImJ_P0025093 Nr2e1 protein_coding protein_coding MGP_129S1SvImJ_T0025094.1 MGP_129S1SvImJ_G0017186.1 mouse_genomes_project 10 41285461 41307069 - MGP_129S1SvImJ_P0025094 Nr2e1 protein_coding protein_coding MGP_129S1SvImJ_T0025095.1 MGP_129S1SvImJ_G0017186.1 mouse_genomes_project 10 41293578 41302207 - MGP_129S1SvImJ_P0025095 Nr2e1 protein_coding protein_coding MGP_129S1SvImJ_T0027324.1 MGP_129S1SvImJ_G0017809.1 mouse_genomes_project 10 130753832 130762038 - MGP_129S1SvImJ_P0027324 Slc26a10 protein_coding protein_coding MGP_129S1SvImJ_T0027325.1 MGP_129S1SvImJ_G0017809.1 mouse_genomes_project 10 130753944 130761671 - MGP_129S1SvImJ_P0027325 Slc26a10 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0099205.1 MGP_129S1SvImJ_G0037272.1 mouse_genomes_project 10 106550541 106550698 - Gm22945 snRNA snRNA MGP_129S1SvImJ_T0099215.1 MGP_129S1SvImJ_G0037282.1 mouse_genomes_project 10 130720294 130720383 - Gm23664 snRNA snRNA MGP_129S1SvImJ_T0026281.1 MGP_129S1SvImJ_G0017503.1 mouse_genomes_project 10 81013551 81038359 - MGP_129S1SvImJ_P0026281 Tcf3 protein_coding protein_coding MGP_129S1SvImJ_T0026282.1 MGP_129S1SvImJ_G0017503.1 mouse_genomes_project 10 81013551 81038369 - MGP_129S1SvImJ_P0026282 Tcf3 protein_coding protein_coding MGP_129S1SvImJ_T0026283.1 MGP_129S1SvImJ_G0017503.1 mouse_genomes_project 10 81013584 81038369 - MGP_129S1SvImJ_P0026283 Tcf3 protein_coding protein_coding MGP_129S1SvImJ_T0026284.1 MGP_129S1SvImJ_G0017503.1 mouse_genomes_project 10 81013584 81038365 - MGP_129S1SvImJ_P0026284 Tcf3 protein_coding protein_coding MGP_129S1SvImJ_T0026285.1 MGP_129S1SvImJ_G0017503.1 mouse_genomes_project 10 81013645 81038343 - MGP_129S1SvImJ_P0026285 Tcf3 protein_coding protein_coding MGP_129S1SvImJ_T0026286.1 MGP_129S1SvImJ_G0017503.1 mouse_genomes_project 10 81013645 81038343 - MGP_129S1SvImJ_P0026286 Tcf3 protein_coding protein_coding MGP_129S1SvImJ_T0026287.1 MGP_129S1SvImJ_G0017503.1 mouse_genomes_project 10 81013657 81035735 - MGP_129S1SvImJ_P0026287 Tcf3 protein_coding protein_coding MGP_129S1SvImJ_T0026288.1 MGP_129S1SvImJ_G0017503.1 mouse_genomes_project 10 81013663 81038357 - MGP_129S1SvImJ_P0026288 Tcf3 protein_coding protein_coding MGP_129S1SvImJ_T0026289.1 MGP_129S1SvImJ_G0017503.1 mouse_genomes_project 10 81013663 81038357 - MGP_129S1SvImJ_P0026289 Tcf3 protein_coding protein_coding MGP_129S1SvImJ_T0026290.1 MGP_129S1SvImJ_G0017503.1 mouse_genomes_project 10 81014091 81035805 - MGP_129S1SvImJ_P0026290 Tcf3 protein_coding protein_coding MGP_129S1SvImJ_T0026291.1 MGP_129S1SvImJ_G0017503.1 mouse_genomes_project 10 81014091 81035708 - MGP_129S1SvImJ_P0026291 Tcf3 protein_coding protein_coding MGP_129S1SvImJ_T0026292.1 MGP_129S1SvImJ_G0017503.1 mouse_genomes_project 10 81016664 81019525 - Tcf3 protein_coding processed_transcript MGP_129S1SvImJ_T0026293.1 MGP_129S1SvImJ_G0017503.1 mouse_genomes_project 10 81019280 81020326 - Tcf3 protein_coding retained_intron MGP_129S1SvImJ_T0026294.1 MGP_129S1SvImJ_G0017503.1 mouse_genomes_project 10 81024120 81025898 - MGP_129S1SvImJ_P0026294 Tcf3 protein_coding protein_coding MGP_129S1SvImJ_T0100451.1 MGP_129S1SvImJ_G0038518.1 mouse_genomes_project 10 103449942 103450074 + Gm26278 snoRNA snoRNA MGP_129S1SvImJ_T0024932.1 MGP_129S1SvImJ_G0017138.1 mouse_genomes_project 10 32622330 32625416 + MGP_129S1SvImJ_P0024932 Tspyl1 protein_coding protein_coding MGP_129S1SvImJ_T0027638.1 MGP_129S1SvImJ_G0017944.1 mouse_genomes_project 10 134017763 134018705 + MGP_129S1SvImJ_P0027638 Olfr822 protein_coding protein_coding MGP_129S1SvImJ_T0024806.1 MGP_129S1SvImJ_G0017087.1 mouse_genomes_project 10 22039373 22054943 - MGP_129S1SvImJ_P0024806 Taar8b protein_coding protein_coding MGP_129S1SvImJ_T0017149.1 MGP_129S1SvImJ_G0015136.1 mouse_genomes_project 10 60943645 60969018 - Gm28447 processed_transcript antisense MGP_129S1SvImJ_T0017150.1 MGP_129S1SvImJ_G0015136.1 mouse_genomes_project 10 60949486 60950463 - Gm28447 processed_transcript retained_intron MGP_129S1SvImJ_T0100414.1 MGP_129S1SvImJ_G0038481.1 mouse_genomes_project 10 12481139 12481269 + Gm23892 snoRNA snoRNA MGP_129S1SvImJ_T0027049.1 MGP_129S1SvImJ_G0017713.1 mouse_genomes_project 10 110577760 110664721 + MGP_129S1SvImJ_P0027049 Pawr protein_coding protein_coding MGP_129S1SvImJ_T0024545.1 MGP_129S1SvImJ_G0017006.1 mouse_genomes_project 10 6961674 7011358 - MGP_129S1SvImJ_P0024545 Samd5 protein_coding protein_coding MGP_129S1SvImJ_T0026653.1 MGP_129S1SvImJ_G0017600.1 mouse_genomes_project 10 86223894 86224956 + MGP_129S1SvImJ_P0026653 Gm8394 protein_coding protein_coding MGP_129S1SvImJ_T0009590.1 MGP_129S1SvImJ_G0007706.1 mouse_genomes_project 10 43790609 43790720 - Gm24271 miRNA miRNA MGP_129S1SvImJ_T0026232.1 MGP_129S1SvImJ_G0017492.1 mouse_genomes_project 10 80858785 80879018 + MGP_129S1SvImJ_P0026232 Dazap1 protein_coding protein_coding MGP_129S1SvImJ_T0026233.1 MGP_129S1SvImJ_G0017492.1 mouse_genomes_project 10 80862294 80886260 + MGP_129S1SvImJ_P0026233 Dazap1 protein_coding protein_coding MGP_129S1SvImJ_T0026234.1 MGP_129S1SvImJ_G0017492.1 mouse_genomes_project 10 80862326 80885745 + MGP_129S1SvImJ_P0026234 Dazap1 protein_coding protein_coding MGP_129S1SvImJ_T0026235.1 MGP_129S1SvImJ_G0017492.1 mouse_genomes_project 10 80862384 80886260 + MGP_129S1SvImJ_P0026235 Dazap1 protein_coding protein_coding MGP_129S1SvImJ_T0026236.1 MGP_129S1SvImJ_G0017492.1 mouse_genomes_project 10 80862434 80876389 + Dazap1 protein_coding processed_transcript MGP_129S1SvImJ_T0026237.1 MGP_129S1SvImJ_G0017492.1 mouse_genomes_project 10 80878435 80883448 + Dazap1 protein_coding retained_intron MGP_129S1SvImJ_T0026238.1 MGP_129S1SvImJ_G0017492.1 mouse_genomes_project 10 80880879 80882534 + Dazap1 protein_coding retained_intron MGP_129S1SvImJ_T0025953.1 MGP_129S1SvImJ_G0017414.1 mouse_genomes_project 10 78437271 78453705 - MGP_129S1SvImJ_P0025953 Aire protein_coding protein_coding MGP_129S1SvImJ_T0025954.1 MGP_129S1SvImJ_G0017414.1 mouse_genomes_project 10 78437271 78453705 - MGP_129S1SvImJ_P0025954 Aire protein_coding protein_coding MGP_129S1SvImJ_T0025955.1 MGP_129S1SvImJ_G0017414.1 mouse_genomes_project 10 78437271 78453705 - MGP_129S1SvImJ_P0025955 Aire protein_coding protein_coding MGP_129S1SvImJ_T0025956.1 MGP_129S1SvImJ_G0017414.1 mouse_genomes_project 10 78437272 78446232 - Aire protein_coding retained_intron MGP_129S1SvImJ_T0025957.1 MGP_129S1SvImJ_G0017414.1 mouse_genomes_project 10 78437272 78453735 - MGP_129S1SvImJ_P0025957 Aire protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025958.1 MGP_129S1SvImJ_G0017414.1 mouse_genomes_project 10 78437280 78453705 - MGP_129S1SvImJ_P0025958 Aire protein_coding protein_coding MGP_129S1SvImJ_T0025959.1 MGP_129S1SvImJ_G0017414.1 mouse_genomes_project 10 78437280 78453705 - MGP_129S1SvImJ_P0025959 Aire protein_coding protein_coding MGP_129S1SvImJ_T0025960.1 MGP_129S1SvImJ_G0017414.1 mouse_genomes_project 10 78437280 78453705 - MGP_129S1SvImJ_P0025960 Aire protein_coding protein_coding MGP_129S1SvImJ_T0025961.1 MGP_129S1SvImJ_G0017414.1 mouse_genomes_project 10 78437280 78453705 - MGP_129S1SvImJ_P0025961 Aire protein_coding protein_coding MGP_129S1SvImJ_T0025962.1 MGP_129S1SvImJ_G0017414.1 mouse_genomes_project 10 78437280 78453705 - MGP_129S1SvImJ_P0025962 Aire protein_coding protein_coding MGP_129S1SvImJ_T0025963.1 MGP_129S1SvImJ_G0017414.1 mouse_genomes_project 10 78437280 78453705 - MGP_129S1SvImJ_P0025963 Aire protein_coding protein_coding MGP_129S1SvImJ_T0025964.1 MGP_129S1SvImJ_G0017414.1 mouse_genomes_project 10 78437280 78453705 - MGP_129S1SvImJ_P0025964 Aire protein_coding protein_coding MGP_129S1SvImJ_T0025965.1 MGP_129S1SvImJ_G0017414.1 mouse_genomes_project 10 78437320 78453705 - MGP_129S1SvImJ_P0025965 Aire protein_coding protein_coding MGP_129S1SvImJ_T0025966.1 MGP_129S1SvImJ_G0017414.1 mouse_genomes_project 10 78437320 78453697 - MGP_129S1SvImJ_P0025966 Aire protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025967.1 MGP_129S1SvImJ_G0017414.1 mouse_genomes_project 10 78438870 78446234 - Aire protein_coding retained_intron MGP_129S1SvImJ_T0025968.1 MGP_129S1SvImJ_G0017414.1 mouse_genomes_project 10 78444302 78451842 - Aire protein_coding retained_intron MGP_129S1SvImJ_T0006166.1 MGP_129S1SvImJ_G0005151.1 mouse_genomes_project 10 101119770 101250294 + B530045E10Rik lincRNA lincRNA MGP_129S1SvImJ_T0006167.1 MGP_129S1SvImJ_G0005151.1 mouse_genomes_project 10 101247769 101250294 + B530045E10Rik lincRNA lincRNA MGP_129S1SvImJ_T0099206.1 MGP_129S1SvImJ_G0037273.1 mouse_genomes_project 10 106939199 106939304 - Gm25522 snRNA snRNA MGP_129S1SvImJ_T0100457.1 MGP_129S1SvImJ_G0038524.1 mouse_genomes_project 10 113161565 113161693 + Gm23698 snoRNA snoRNA MGP_129S1SvImJ_T0100404.1 MGP_129S1SvImJ_G0038471.1 mouse_genomes_project 10 1143900 1144032 + Gm25369 snoRNA snoRNA MGP_129S1SvImJ_T0006161.1 MGP_129S1SvImJ_G0005147.1 mouse_genomes_project 10 95339351 95344050 + 4930471D02Rik lincRNA lincRNA MGP_129S1SvImJ_T0027549.1 MGP_129S1SvImJ_G0017887.1 mouse_genomes_project 10 132682000 132691242 - MGP_129S1SvImJ_P0027549 Gdf11 protein_coding protein_coding MGP_129S1SvImJ_T0099192.1 MGP_129S1SvImJ_G0037259.1 mouse_genomes_project 10 83936855 83936958 - Gm23122 snRNA snRNA MGP_129S1SvImJ_T0025028.1 MGP_129S1SvImJ_G0017173.1 mouse_genomes_project 10 40118207 40128922 + MGP_129S1SvImJ_P0025028 Mical1 protein_coding protein_coding MGP_129S1SvImJ_T0025029.1 MGP_129S1SvImJ_G0017173.1 mouse_genomes_project 10 40118207 40128920 + MGP_129S1SvImJ_P0025029 Mical1 protein_coding protein_coding MGP_129S1SvImJ_T0025030.1 MGP_129S1SvImJ_G0017173.1 mouse_genomes_project 10 40118229 40127115 + Mical1 protein_coding retained_intron MGP_129S1SvImJ_T0025031.1 MGP_129S1SvImJ_G0017173.1 mouse_genomes_project 10 40118261 40128922 + MGP_129S1SvImJ_P0025031 Mical1 protein_coding protein_coding MGP_129S1SvImJ_T0025032.1 MGP_129S1SvImJ_G0017173.1 mouse_genomes_project 10 40118270 40128922 + MGP_129S1SvImJ_P0025032 Mical1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0025033.1 MGP_129S1SvImJ_G0017173.1 mouse_genomes_project 10 40118972 40120079 + MGP_129S1SvImJ_P0025033 Mical1 protein_coding protein_coding MGP_129S1SvImJ_T0025034.1 MGP_129S1SvImJ_G0017173.1 mouse_genomes_project 10 40120371 40123055 + Mical1 protein_coding retained_intron MGP_129S1SvImJ_T0025035.1 MGP_129S1SvImJ_G0017173.1 mouse_genomes_project 10 40121881 40123048 + Mical1 protein_coding retained_intron MGP_129S1SvImJ_T0025036.1 MGP_129S1SvImJ_G0017173.1 mouse_genomes_project 10 40123596 40124606 + Mical1 protein_coding retained_intron MGP_129S1SvImJ_T0025037.1 MGP_129S1SvImJ_G0017173.1 mouse_genomes_project 10 40125963 40126961 + Mical1 protein_coding retained_intron MGP_129S1SvImJ_T0025039.1 MGP_129S1SvImJ_G0017173.1 mouse_genomes_project 10 40128000 40128610 + Mical1 protein_coding retained_intron MGP_129S1SvImJ_T0025040.1 MGP_129S1SvImJ_G0017173.1 mouse_genomes_project 10 40128261 40128920 + Mical1 protein_coding retained_intron MGP_129S1SvImJ_T0006183.1 MGP_129S1SvImJ_G0005163.1 mouse_genomes_project 10 131940158 131944111 - lincRNA lincRNA MGP_129S1SvImJ_T0026573.1 MGP_129S1SvImJ_G0017575.1 mouse_genomes_project 10 83056982 83059206 + MGP_129S1SvImJ_P0026573 protein_coding protein_coding MGP_129S1SvImJ_T0025997.1 MGP_129S1SvImJ_G0017426.1 mouse_genomes_project 10 79050677 79058128 - MGP_129S1SvImJ_P0025997 Syde1 protein_coding protein_coding MGP_129S1SvImJ_T0003123.1 MGP_129S1SvImJ_G0002908.1 mouse_genomes_project 10 131217853 131219176 + Gm16217 antisense antisense MGP_129S1SvImJ_T0100417.1 MGP_129S1SvImJ_G0038484.1 mouse_genomes_project 10 21706199 21706273 - Snord100 snoRNA snoRNA MGP_129S1SvImJ_T0025261.1 MGP_129S1SvImJ_G0017248.1 mouse_genomes_project 10 57604940 57697497 + MGP_129S1SvImJ_P0025261 Ccdc138 protein_coding protein_coding MGP_129S1SvImJ_T0025262.1 MGP_129S1SvImJ_G0017248.1 mouse_genomes_project 10 57605166 57697109 + MGP_129S1SvImJ_P0025262 Ccdc138 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0100465.1 MGP_129S1SvImJ_G0038532.1 mouse_genomes_project 10 131759693 131759767 + Snord59a snoRNA snoRNA MGP_129S1SvImJ_T0006156.1 MGP_129S1SvImJ_G0005145.1 mouse_genomes_project 10 93496490 93499059 + Gm26700 lincRNA lincRNA MGP_129S1SvImJ_T0026296.1 MGP_129S1SvImJ_G0017505.1 mouse_genomes_project 10 81137446 81158389 - MGP_129S1SvImJ_P0026296 Atp8b3 protein_coding protein_coding MGP_129S1SvImJ_T0100416.1 MGP_129S1SvImJ_G0038483.1 mouse_genomes_project 10 21705796 21705925 - Snora33 snoRNA snoRNA MGP_129S1SvImJ_T0025124.1 MGP_129S1SvImJ_G0017193.1 mouse_genomes_project 10 42253074 42292540 + MGP_129S1SvImJ_P0025124 Bend3 protein_coding protein_coding MGP_129S1SvImJ_T0098434.1 MGP_129S1SvImJ_G0036519.1 mouse_genomes_project 10 24414356 24414456 + Gm23757 rRNA rRNA MGP_129S1SvImJ_T0009607.1 MGP_129S1SvImJ_G0007723.1 mouse_genomes_project 10 78852182 78852253 - Mir6907 miRNA miRNA MGP_129S1SvImJ_T0025142.1 MGP_129S1SvImJ_G0017204.1 mouse_genomes_project 10 43111267 43217067 + MGP_129S1SvImJ_P0025142 Atg5 protein_coding protein_coding MGP_129S1SvImJ_T0026116.1 MGP_129S1SvImJ_G0017468.1 mouse_genomes_project 10 80455712 80469897 - MGP_129S1SvImJ_P0026116 Med16 protein_coding protein_coding MGP_129S1SvImJ_T0026117.1 MGP_129S1SvImJ_G0017468.1 mouse_genomes_project 10 80455939 80469874 - MGP_129S1SvImJ_P0026117 Med16 protein_coding protein_coding MGP_129S1SvImJ_T0026118.1 MGP_129S1SvImJ_G0017468.1 mouse_genomes_project 10 80459211 80460661 - Med16 protein_coding retained_intron MGP_129S1SvImJ_T0026119.1 MGP_129S1SvImJ_G0017468.1 mouse_genomes_project 10 80462813 80469794 - Med16 protein_coding retained_intron MGP_129S1SvImJ_T0026120.1 MGP_129S1SvImJ_G0017468.1 mouse_genomes_project 10 80464154 80469886 - MGP_129S1SvImJ_P0026120 Med16 protein_coding protein_coding MGP_129S1SvImJ_T0026121.1 MGP_129S1SvImJ_G0017468.1 mouse_genomes_project 10 80464330 80469297 - MGP_129S1SvImJ_P0026121 Med16 protein_coding protein_coding MGP_129S1SvImJ_T0026122.1 MGP_129S1SvImJ_G0017468.1 mouse_genomes_project 10 80464357 80469899 - MGP_129S1SvImJ_P0026122 Med16 protein_coding protein_coding MGP_129S1SvImJ_T0026344.1 MGP_129S1SvImJ_G0017522.1 mouse_genomes_project 10 81486695 81491322 + MGP_129S1SvImJ_P0026344 Oaz1 protein_coding protein_coding MGP_129S1SvImJ_T0026345.1 MGP_129S1SvImJ_G0017522.1 mouse_genomes_project 10 81486721 81491316 + Oaz1 protein_coding retained_intron MGP_129S1SvImJ_T0026346.1 MGP_129S1SvImJ_G0017522.1 mouse_genomes_project 10 81486722 81490989 + MGP_129S1SvImJ_P0026346 Oaz1 protein_coding protein_coding MGP_129S1SvImJ_T0026347.1 MGP_129S1SvImJ_G0017522.1 mouse_genomes_project 10 81486725 81491322 + MGP_129S1SvImJ_P0026347 Oaz1 protein_coding protein_coding MGP_129S1SvImJ_T0026348.1 MGP_129S1SvImJ_G0017522.1 mouse_genomes_project 10 81486732 81491037 + MGP_129S1SvImJ_P0026348 Oaz1 protein_coding protein_coding MGP_129S1SvImJ_T0026349.1 MGP_129S1SvImJ_G0017522.1 mouse_genomes_project 10 81487751 81491009 + MGP_129S1SvImJ_P0026349 Oaz1 protein_coding protein_coding MGP_129S1SvImJ_T0026350.1 MGP_129S1SvImJ_G0017522.1 mouse_genomes_project 10 81489153 81491317 + MGP_129S1SvImJ_P0026350 Oaz1 protein_coding protein_coding MGP_129S1SvImJ_T0025106.1 MGP_129S1SvImJ_G0017189.1 mouse_genomes_project 10 41590269 41696760 + MGP_129S1SvImJ_P0025106 Scml4 protein_coding protein_coding MGP_129S1SvImJ_T0025107.1 MGP_129S1SvImJ_G0017189.1 mouse_genomes_project 10 41590430 41659394 + MGP_129S1SvImJ_P0025107 Scml4 protein_coding protein_coding MGP_129S1SvImJ_T0025108.1 MGP_129S1SvImJ_G0017189.1 mouse_genomes_project 10 41590554 41662997 + MGP_129S1SvImJ_P0025108 Scml4 protein_coding protein_coding MGP_129S1SvImJ_T0025109.1 MGP_129S1SvImJ_G0017189.1 mouse_genomes_project 10 41590680 41696758 + MGP_129S1SvImJ_P0025109 Scml4 protein_coding protein_coding MGP_129S1SvImJ_T0025110.1 MGP_129S1SvImJ_G0017189.1 mouse_genomes_project 10 41595399 41659259 + MGP_129S1SvImJ_P0025110 Scml4 protein_coding protein_coding MGP_129S1SvImJ_T0025111.1 MGP_129S1SvImJ_G0017189.1 mouse_genomes_project 10 41632193 41663773 + MGP_129S1SvImJ_P0025111 Scml4 protein_coding protein_coding MGP_129S1SvImJ_T0025112.1 MGP_129S1SvImJ_G0017189.1 mouse_genomes_project 10 41662973 41694750 + Scml4 protein_coding retained_intron MGP_129S1SvImJ_T0025113.1 MGP_129S1SvImJ_G0017189.1 mouse_genomes_project 10 41663549 41676809 + Scml4 protein_coding retained_intron MGP_129S1SvImJ_T0025114.1 MGP_129S1SvImJ_G0017189.1 mouse_genomes_project 10 41668508 41694701 + Scml4 protein_coding processed_transcript MGP_129S1SvImJ_T0003067.1 MGP_129S1SvImJ_G0002868.1 mouse_genomes_project 10 76293857 76295630 + Gm16222 antisense antisense MGP_129S1SvImJ_T0024429.1 MGP_129S1SvImJ_G0016981.1 mouse_genomes_project 10 1642183 1951943 + Esr1 protein_coding processed_transcript MGP_129S1SvImJ_T0024430.1 MGP_129S1SvImJ_G0016981.1 mouse_genomes_project 10 1642580 2065710 + MGP_129S1SvImJ_P0024430 Esr1 protein_coding protein_coding MGP_129S1SvImJ_T0024431.1 MGP_129S1SvImJ_G0016981.1 mouse_genomes_project 10 1642587 1708472 + Esr1 protein_coding retained_intron MGP_129S1SvImJ_T0024432.1 MGP_129S1SvImJ_G0016981.1 mouse_genomes_project 10 1642604 1906779 + Esr1 protein_coding retained_intron MGP_129S1SvImJ_T0024433.1 MGP_129S1SvImJ_G0016981.1 mouse_genomes_project 10 1642612 2063857 + MGP_129S1SvImJ_P0024433 Esr1 protein_coding protein_coding MGP_129S1SvImJ_T0024434.1 MGP_129S1SvImJ_G0016981.1 mouse_genomes_project 10 1749291 2060053 + MGP_129S1SvImJ_P0024434 Esr1 protein_coding protein_coding MGP_129S1SvImJ_T0024435.1 MGP_129S1SvImJ_G0016981.1 mouse_genomes_project 10 1749291 2020276 + MGP_129S1SvImJ_P0024435 Esr1 protein_coding protein_coding MGP_129S1SvImJ_T0024436.1 MGP_129S1SvImJ_G0016981.1 mouse_genomes_project 10 1751787 1823878 + Esr1 protein_coding processed_transcript MGP_129S1SvImJ_T0024437.1 MGP_129S1SvImJ_G0016981.1 mouse_genomes_project 10 1974073 2055959 + Esr1 protein_coding processed_transcript MGP_129S1SvImJ_T0024438.1 MGP_129S1SvImJ_G0016981.1 mouse_genomes_project 10 1990989 2059685 + Esr1 protein_coding processed_transcript MGP_129S1SvImJ_T0009601.1 MGP_129S1SvImJ_G0007717.1 mouse_genomes_project 10 61593698 61593759 - Mir7662 miRNA miRNA MGP_129S1SvImJ_T0025375.1 MGP_129S1SvImJ_G0017276.1 mouse_genomes_project 10 60510412 60595824 - MGP_129S1SvImJ_P0025375 Adamts14 protein_coding protein_coding MGP_129S1SvImJ_T0025376.1 MGP_129S1SvImJ_G0017276.1 mouse_genomes_project 10 60511754 60593969 - MGP_129S1SvImJ_P0025376 Adamts14 protein_coding protein_coding MGP_129S1SvImJ_T0024486.1 MGP_129S1SvImJ_G0016991.1 mouse_genomes_project 10 4011777 4123977 - MGP_129S1SvImJ_P0024486 Ipcef1 protein_coding protein_coding MGP_129S1SvImJ_T0024487.1 MGP_129S1SvImJ_G0016991.1 mouse_genomes_project 10 4016401 4123309 - MGP_129S1SvImJ_P0024487 Ipcef1 protein_coding protein_coding MGP_129S1SvImJ_T0024488.1 MGP_129S1SvImJ_G0016991.1 mouse_genomes_project 10 4039835 4207789 - MGP_129S1SvImJ_P0024488 Ipcef1 protein_coding protein_coding MGP_129S1SvImJ_T0024489.1 MGP_129S1SvImJ_G0016991.1 mouse_genomes_project 10 4039835 4175679 - MGP_129S1SvImJ_P0024489 Ipcef1 protein_coding protein_coding MGP_129S1SvImJ_T0024490.1 MGP_129S1SvImJ_G0016991.1 mouse_genomes_project 10 4045816 4123915 - Ipcef1 protein_coding processed_transcript MGP_129S1SvImJ_T0024491.1 MGP_129S1SvImJ_G0016991.1 mouse_genomes_project 10 4045816 4124066 - Ipcef1 protein_coding processed_transcript MGP_129S1SvImJ_T0024492.1 MGP_129S1SvImJ_G0016991.1 mouse_genomes_project 10 4048095 4175661 - MGP_129S1SvImJ_P0024492 Ipcef1 protein_coding protein_coding MGP_129S1SvImJ_T0024493.1 MGP_129S1SvImJ_G0016991.1 mouse_genomes_project 10 4048175 4124135 - Ipcef1 protein_coding processed_transcript MGP_129S1SvImJ_T0024494.1 MGP_129S1SvImJ_G0016991.1 mouse_genomes_project 10 4092947 4149259 - MGP_129S1SvImJ_P0024494 Ipcef1 protein_coding protein_coding MGP_129S1SvImJ_T0025390.1 MGP_129S1SvImJ_G0017287.1 mouse_genomes_project 10 61081619 61107539 + MGP_129S1SvImJ_P0025390 Aifm2 protein_coding protein_coding MGP_129S1SvImJ_T0025391.1 MGP_129S1SvImJ_G0017287.1 mouse_genomes_project 10 61081643 61096809 + Aifm2 protein_coding retained_intron MGP_129S1SvImJ_T0025392.1 MGP_129S1SvImJ_G0017287.1 mouse_genomes_project 10 61081667 61108146 + MGP_129S1SvImJ_P0025392 Aifm2 protein_coding protein_coding MGP_129S1SvImJ_T0025393.1 MGP_129S1SvImJ_G0017287.1 mouse_genomes_project 10 61081679 61107533 + MGP_129S1SvImJ_P0025393 Aifm2 protein_coding protein_coding MGP_129S1SvImJ_T0025394.1 MGP_129S1SvImJ_G0017287.1 mouse_genomes_project 10 61081688 61082592 + Aifm2 protein_coding processed_transcript MGP_129S1SvImJ_T0025395.1 MGP_129S1SvImJ_G0017287.1 mouse_genomes_project 10 61089666 61107539 + MGP_129S1SvImJ_P0025395 Aifm2 protein_coding protein_coding MGP_129S1SvImJ_T0025396.1 MGP_129S1SvImJ_G0017287.1 mouse_genomes_project 10 61097035 61103456 + Aifm2 protein_coding retained_intron MGP_129S1SvImJ_T0009109.1 MGP_129S1SvImJ_G0007326.1 mouse_genomes_project 8 56391648 56392986 + lincRNA lincRNA MGP_129S1SvImJ_T0089011.1 MGP_129S1SvImJ_G0033659.1 mouse_genomes_project 8 67796529 68091468 - MGP_129S1SvImJ_P0089011 Psd3 protein_coding protein_coding MGP_129S1SvImJ_T0089012.1 MGP_129S1SvImJ_G0033659.1 mouse_genomes_project 8 67796529 68091468 - MGP_129S1SvImJ_P0089012 Psd3 protein_coding protein_coding MGP_129S1SvImJ_T0089013.1 MGP_129S1SvImJ_G0033659.1 mouse_genomes_project 8 67796536 67924696 - MGP_129S1SvImJ_P0089013 Psd3 protein_coding protein_coding MGP_129S1SvImJ_T0089014.1 MGP_129S1SvImJ_G0033659.1 mouse_genomes_project 8 67803484 68091468 - MGP_129S1SvImJ_P0089014 Psd3 protein_coding protein_coding MGP_129S1SvImJ_T0089015.1 MGP_129S1SvImJ_G0033659.1 mouse_genomes_project 8 67804318 68024422 - MGP_129S1SvImJ_P0089015 Psd3 protein_coding protein_coding MGP_129S1SvImJ_T0089016.1 MGP_129S1SvImJ_G0033659.1 mouse_genomes_project 8 67818963 67924634 - MGP_129S1SvImJ_P0089016 Psd3 protein_coding protein_coding MGP_129S1SvImJ_T0089017.1 MGP_129S1SvImJ_G0033659.1 mouse_genomes_project 8 67897583 68179290 - Psd3 protein_coding retained_intron MGP_129S1SvImJ_T0089018.1 MGP_129S1SvImJ_G0033659.1 mouse_genomes_project 8 67989352 68017595 - Psd3 protein_coding processed_transcript MGP_129S1SvImJ_T0089019.1 MGP_129S1SvImJ_G0033659.1 mouse_genomes_project 8 68017122 68067644 - Psd3 protein_coding retained_intron MGP_129S1SvImJ_T0101391.1 MGP_129S1SvImJ_G0039458.1 mouse_genomes_project 8 63862074 63862205 + Gm24580 snoRNA snoRNA MGP_129S1SvImJ_T0089974.1 MGP_129S1SvImJ_G0033946.1 mouse_genomes_project 8 94673299 94715712 - MGP_129S1SvImJ_P0089974 Ces1g protein_coding protein_coding MGP_129S1SvImJ_T0089396.1 MGP_129S1SvImJ_G0033764.1 mouse_genomes_project 8 72316947 72330117 + MGP_129S1SvImJ_P0089396 Zfp709 protein_coding protein_coding MGP_129S1SvImJ_T0089397.1 MGP_129S1SvImJ_G0033764.1 mouse_genomes_project 8 72317290 72317657 + Zfp709 protein_coding processed_transcript MGP_129S1SvImJ_T0089564.1 MGP_129S1SvImJ_G0033825.1 mouse_genomes_project 8 83648773 83877321 + MGP_129S1SvImJ_P0089564 Rnf150 protein_coding protein_coding MGP_129S1SvImJ_T0088283.1 MGP_129S1SvImJ_G0033405.1 mouse_genomes_project 8 16319945 16365777 + MGP_129S1SvImJ_P0088283 Agpat5 protein_coding protein_coding MGP_129S1SvImJ_T0088284.1 MGP_129S1SvImJ_G0033405.1 mouse_genomes_project 8 16319947 16357828 + MGP_129S1SvImJ_P0088284 Agpat5 protein_coding protein_coding MGP_129S1SvImJ_T0090988.1 MGP_129S1SvImJ_G0034284.1 mouse_genomes_project 8 128747056 128764703 + MGP_129S1SvImJ_P0090988 Tsnax protein_coding protein_coding MGP_129S1SvImJ_T0090989.1 MGP_129S1SvImJ_G0034284.1 mouse_genomes_project 8 128747256 128762828 + MGP_129S1SvImJ_P0090989 Tsnax protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089950.1 MGP_129S1SvImJ_G0033938.1 mouse_genomes_project 8 94220357 94221358 + MGP_129S1SvImJ_P0089950 Capns2 protein_coding protein_coding MGP_129S1SvImJ_T0015965.1 MGP_129S1SvImJ_G0014054.1 mouse_genomes_project 8 18642702 18643438 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009094.1 MGP_129S1SvImJ_G0007314.1 mouse_genomes_project 8 31339775 31404489 - Gm3985 lincRNA lincRNA MGP_129S1SvImJ_T0009095.1 MGP_129S1SvImJ_G0007314.1 mouse_genomes_project 8 31341750 31397200 - Gm3985 lincRNA lincRNA MGP_129S1SvImJ_T0088321.1 MGP_129S1SvImJ_G0033436.1 mouse_genomes_project 8 19730902 19731882 - MGP_129S1SvImJ_P0088321 Defb11 protein_coding protein_coding MGP_129S1SvImJ_T0090309.1 MGP_129S1SvImJ_G0034073.1 mouse_genomes_project 8 108320065 108349979 + MGP_129S1SvImJ_P0090309 Dus2 protein_coding protein_coding MGP_129S1SvImJ_T0090311.1 MGP_129S1SvImJ_G0034073.1 mouse_genomes_project 8 108344788 108393299 + MGP_129S1SvImJ_P0090311 Dus2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090312.1 MGP_129S1SvImJ_G0034073.1 mouse_genomes_project 8 108344788 108393278 + MGP_129S1SvImJ_P0090312 Dus2 protein_coding protein_coding MGP_129S1SvImJ_T0090313.1 MGP_129S1SvImJ_G0034073.1 mouse_genomes_project 8 108344803 108366207 + Dus2 protein_coding retained_intron MGP_129S1SvImJ_T0090314.1 MGP_129S1SvImJ_G0034073.1 mouse_genomes_project 8 108369199 108384631 + Dus2 protein_coding retained_intron MGP_129S1SvImJ_T0090315.1 MGP_129S1SvImJ_G0034073.1 mouse_genomes_project 8 108388166 108391658 + Dus2 protein_coding retained_intron MGP_129S1SvImJ_T0089074.1 MGP_129S1SvImJ_G0033676.1 mouse_genomes_project 8 70004408 70020936 + MGP_129S1SvImJ_P0089074 Atp13a1 protein_coding protein_coding MGP_129S1SvImJ_T0089865.1 MGP_129S1SvImJ_G0033912.1 mouse_genomes_project 8 88478499 88483123 - MGP_129S1SvImJ_P0089865 Cbln1 protein_coding protein_coding MGP_129S1SvImJ_T0089866.1 MGP_129S1SvImJ_G0033912.1 mouse_genomes_project 8 88478883 88482917 - MGP_129S1SvImJ_P0089866 Cbln1 protein_coding protein_coding MGP_129S1SvImJ_T0009201.1 MGP_129S1SvImJ_G0007393.1 mouse_genomes_project 8 124919443 124925370 + Gm26747 lincRNA lincRNA MGP_129S1SvImJ_T0101395.1 MGP_129S1SvImJ_G0039462.1 mouse_genomes_project 8 68127208 68127339 + Gm22018 snoRNA snoRNA MGP_129S1SvImJ_T0089639.1 MGP_129S1SvImJ_G0033849.1 mouse_genomes_project 8 84895058 84908518 - MGP_129S1SvImJ_P0089639 Il27ra protein_coding protein_coding MGP_129S1SvImJ_T0101401.1 MGP_129S1SvImJ_G0039468.1 mouse_genomes_project 8 83198779 83198915 + Gm25138 snoRNA snoRNA MGP_129S1SvImJ_T0009128.1 MGP_129S1SvImJ_G0007343.1 mouse_genomes_project 8 82439608 82440805 - 4930579O11Rik lincRNA lincRNA MGP_129S1SvImJ_T0009129.1 MGP_129S1SvImJ_G0007343.1 mouse_genomes_project 8 82439636 82440851 - 4930579O11Rik lincRNA lincRNA MGP_129S1SvImJ_T0011050.1 MGP_129S1SvImJ_G0009166.1 mouse_genomes_project 8 126723515 126723582 + Mir7080 miRNA miRNA MGP_129S1SvImJ_T0089569.1 MGP_129S1SvImJ_G0033828.1 mouse_genomes_project 8 84081860 84094164 + MGP_129S1SvImJ_P0089569 Ucp1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089910.1 MGP_129S1SvImJ_G0033924.1 mouse_genomes_project 8 90148724 90165719 - MGP_129S1SvImJ_P0089910 Sall1 protein_coding protein_coding MGP_129S1SvImJ_T0015999.1 MGP_129S1SvImJ_G0014088.1 mouse_genomes_project 8 81670061 81671055 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0090303.1 MGP_129S1SvImJ_G0034071.1 mouse_genomes_project 8 108299757 108307569 - MGP_129S1SvImJ_P0090303 Dpep3 protein_coding protein_coding MGP_129S1SvImJ_T0089580.1 MGP_129S1SvImJ_G0033832.1 mouse_genomes_project 8 84360650 84361746 + MGP_129S1SvImJ_P0089580 Olfr370 protein_coding protein_coding MGP_129S1SvImJ_T0089164.1 MGP_129S1SvImJ_G0033698.1 mouse_genomes_project 8 70546017 70549629 + MGP_129S1SvImJ_P0089164 Homer3 protein_coding protein_coding MGP_129S1SvImJ_T0089165.1 MGP_129S1SvImJ_G0033698.1 mouse_genomes_project 8 70546017 70557437 + MGP_129S1SvImJ_P0089165 Homer3 protein_coding protein_coding MGP_129S1SvImJ_T0089166.1 MGP_129S1SvImJ_G0033698.1 mouse_genomes_project 8 70546189 70557437 + MGP_129S1SvImJ_P0089166 Homer3 protein_coding protein_coding MGP_129S1SvImJ_T0089167.1 MGP_129S1SvImJ_G0033698.1 mouse_genomes_project 8 70546224 70549401 + Homer3 protein_coding retained_intron MGP_129S1SvImJ_T0089168.1 MGP_129S1SvImJ_G0033698.1 mouse_genomes_project 8 70548343 70557429 + MGP_129S1SvImJ_P0089168 Homer3 protein_coding protein_coding MGP_129S1SvImJ_T0089169.1 MGP_129S1SvImJ_G0033698.1 mouse_genomes_project 8 70549029 70554816 + Homer3 protein_coding retained_intron MGP_129S1SvImJ_T0089170.1 MGP_129S1SvImJ_G0033698.1 mouse_genomes_project 8 70552241 70554681 + Homer3 protein_coding retained_intron MGP_129S1SvImJ_T0089171.1 MGP_129S1SvImJ_G0033698.1 mouse_genomes_project 8 70554152 70556546 + MGP_129S1SvImJ_P0089171 Homer3 protein_coding protein_coding MGP_129S1SvImJ_T0088334.1 MGP_129S1SvImJ_G0033444.1 mouse_genomes_project 8 19914125 19965581 - MGP_129S1SvImJ_P0088334 Nek5 protein_coding protein_coding MGP_129S1SvImJ_T0088335.1 MGP_129S1SvImJ_G0033444.1 mouse_genomes_project 8 19914140 19964196 - MGP_129S1SvImJ_P0088335 Nek5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0088535.1 MGP_129S1SvImJ_G0033511.1 mouse_genomes_project 8 26928509 27531105 - MGP_129S1SvImJ_P0088535 Unc5d protein_coding protein_coding MGP_129S1SvImJ_T0088536.1 MGP_129S1SvImJ_G0033511.1 mouse_genomes_project 8 26931464 27142101 - MGP_129S1SvImJ_P0088536 Unc5d protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089540.1 MGP_129S1SvImJ_G0033817.1 mouse_genomes_project 8 81209439 81226783 + MGP_129S1SvImJ_P0089540 Gypa protein_coding protein_coding MGP_129S1SvImJ_T0010963.1 MGP_129S1SvImJ_G0009079.1 mouse_genomes_project 8 2726289 2726358 + Gm22565 miRNA miRNA MGP_129S1SvImJ_T0088209.1 MGP_129S1SvImJ_G0033384.1 mouse_genomes_project 8 10925222 10942307 - Rasa3 protein_coding retained_intron MGP_129S1SvImJ_T0088210.1 MGP_129S1SvImJ_G0033384.1 mouse_genomes_project 8 10925222 11046681 - MGP_129S1SvImJ_P0088210 Rasa3 protein_coding protein_coding MGP_129S1SvImJ_T0088211.1 MGP_129S1SvImJ_G0033384.1 mouse_genomes_project 8 10935738 10936312 - Rasa3 protein_coding retained_intron MGP_129S1SvImJ_T0088212.1 MGP_129S1SvImJ_G0033384.1 mouse_genomes_project 8 10954121 10964421 - Rasa3 protein_coding retained_intron MGP_129S1SvImJ_T0088213.1 MGP_129S1SvImJ_G0033384.1 mouse_genomes_project 8 10954122 11046529 - MGP_129S1SvImJ_P0088213 Rasa3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088214.1 MGP_129S1SvImJ_G0033384.1 mouse_genomes_project 8 10956407 11046561 - Rasa3 protein_coding retained_intron MGP_129S1SvImJ_T0089348.1 MGP_129S1SvImJ_G0033751.1 mouse_genomes_project 8 71943659 71946819 - MGP_129S1SvImJ_P0089348 Bst2 protein_coding protein_coding MGP_129S1SvImJ_T0090421.1 MGP_129S1SvImJ_G0034110.1 mouse_genomes_project 8 112211280 112281893 + MGP_129S1SvImJ_P0090421 Pkd1l3 protein_coding protein_coding MGP_129S1SvImJ_T0090422.1 MGP_129S1SvImJ_G0034110.1 mouse_genomes_project 8 112211280 112283816 + MGP_129S1SvImJ_P0090422 Pkd1l3 protein_coding protein_coding MGP_129S1SvImJ_T0098655.1 MGP_129S1SvImJ_G0036740.1 mouse_genomes_project 8 77150145 77150273 - Gm27355 rRNA rRNA MGP_129S1SvImJ_T0011736.1 MGP_129S1SvImJ_G0009852.1 mouse_genomes_project 8 29947254 29947478 - Gm23539 misc_RNA misc_RNA MGP_129S1SvImJ_T0089045.1 MGP_129S1SvImJ_G0033665.1 mouse_genomes_project 8 69235577 69263380 + MGP_129S1SvImJ_P0089045 Atp6v1b2 protein_coding protein_coding MGP_129S1SvImJ_T0089046.1 MGP_129S1SvImJ_G0033665.1 mouse_genomes_project 8 69235699 69257036 + Atp6v1b2 protein_coding retained_intron MGP_129S1SvImJ_T0089047.1 MGP_129S1SvImJ_G0033665.1 mouse_genomes_project 8 69235718 69251813 + Atp6v1b2 protein_coding retained_intron MGP_129S1SvImJ_T0089048.1 MGP_129S1SvImJ_G0033665.1 mouse_genomes_project 8 69235720 69246170 + Atp6v1b2 protein_coding retained_intron MGP_129S1SvImJ_T0089049.1 MGP_129S1SvImJ_G0033665.1 mouse_genomes_project 8 69251776 69252625 + Atp6v1b2 protein_coding retained_intron MGP_129S1SvImJ_T0089050.1 MGP_129S1SvImJ_G0033665.1 mouse_genomes_project 8 69252689 69258008 + Atp6v1b2 protein_coding retained_intron MGP_129S1SvImJ_T0100119.1 MGP_129S1SvImJ_G0038186.1 mouse_genomes_project 8 59934077 59934181 + Gm26164 snRNA snRNA MGP_129S1SvImJ_T0090601.1 MGP_129S1SvImJ_G0034172.1 mouse_genomes_project 8 120294544 120348518 + MGP_129S1SvImJ_P0090601 Gan protein_coding protein_coding MGP_129S1SvImJ_T0011740.1 MGP_129S1SvImJ_G0009856.1 mouse_genomes_project 8 65382580 65382723 + Gm25403 misc_RNA misc_RNA MGP_129S1SvImJ_T0098650.1 MGP_129S1SvImJ_G0036735.1 mouse_genomes_project 8 46907185 46907309 + n-R5s96 rRNA rRNA MGP_129S1SvImJ_T0009106.1 MGP_129S1SvImJ_G0007323.1 mouse_genomes_project 8 44636006 44645209 - lincRNA lincRNA MGP_129S1SvImJ_T0089465.1 MGP_129S1SvImJ_G0033792.1 mouse_genomes_project 8 75305943 75326314 + MGP_129S1SvImJ_P0089465 Isx protein_coding protein_coding MGP_129S1SvImJ_T0089466.1 MGP_129S1SvImJ_G0033792.1 mouse_genomes_project 8 75306310 75325955 + MGP_129S1SvImJ_P0089466 Isx protein_coding protein_coding MGP_129S1SvImJ_T0089605.1 MGP_129S1SvImJ_G0033840.1 mouse_genomes_project 8 84567953 84587253 - MGP_129S1SvImJ_P0089605 Adgre5 protein_coding protein_coding MGP_129S1SvImJ_T0089606.1 MGP_129S1SvImJ_G0033840.1 mouse_genomes_project 8 84568064 84587096 - MGP_129S1SvImJ_P0089606 Adgre5 protein_coding protein_coding MGP_129S1SvImJ_T0089607.1 MGP_129S1SvImJ_G0033840.1 mouse_genomes_project 8 84568066 84587100 - MGP_129S1SvImJ_P0089607 Adgre5 protein_coding protein_coding MGP_129S1SvImJ_T0089608.1 MGP_129S1SvImJ_G0033840.1 mouse_genomes_project 8 84568520 84569533 - Adgre5 protein_coding retained_intron MGP_129S1SvImJ_T0089609.1 MGP_129S1SvImJ_G0033840.1 mouse_genomes_project 8 84569950 84574210 - Adgre5 protein_coding retained_intron MGP_129S1SvImJ_T0089610.1 MGP_129S1SvImJ_G0033840.1 mouse_genomes_project 8 84573453 84574236 - Adgre5 protein_coding retained_intron MGP_129S1SvImJ_T0089611.1 MGP_129S1SvImJ_G0033840.1 mouse_genomes_project 8 84579446 84587110 - MGP_129S1SvImJ_P0089611 Adgre5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0098394.1 MGP_129S1SvImJ_G0036479.1 mouse_genomes_project 8 90309836 90310426 - pseudogene pseudogene MGP_129S1SvImJ_T0088557.1 MGP_129S1SvImJ_G0033522.1 mouse_genomes_project 8 31884265 31885107 + MGP_129S1SvImJ_P0088557 5930422O12Rik protein_coding protein_coding MGP_129S1SvImJ_T0090801.1 MGP_129S1SvImJ_G0034223.1 mouse_genomes_project 8 125959205 125960818 + MGP_129S1SvImJ_P0090801 Il17c protein_coding protein_coding MGP_129S1SvImJ_T0087929.1 MGP_129S1SvImJ_G0033299.1 mouse_genomes_project 8 40652 173306 - MGP_129S1SvImJ_P0087929 Insr protein_coding unknown_likely_coding MGP_129S1SvImJ_T0087930.1 MGP_129S1SvImJ_G0033299.1 mouse_genomes_project 8 40660 173808 - MGP_129S1SvImJ_P0087930 Insr protein_coding protein_coding MGP_129S1SvImJ_T0087931.1 MGP_129S1SvImJ_G0033299.1 mouse_genomes_project 8 100505 173742 - Insr protein_coding retained_intron MGP_129S1SvImJ_T0009200.1 MGP_129S1SvImJ_G0007392.1 mouse_genomes_project 8 124751498 124858635 - Gm26815 lincRNA lincRNA MGP_129S1SvImJ_T0089818.1 MGP_129S1SvImJ_G0033896.1 mouse_genomes_project 8 86056542 86066856 - MGP_129S1SvImJ_P0089818 Zfp791 protein_coding protein_coding MGP_129S1SvImJ_T0090949.1 MGP_129S1SvImJ_G0034270.1 mouse_genomes_project 8 128044635 128065851 - MGP_129S1SvImJ_P0090949 Pgbd5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0090950.1 MGP_129S1SvImJ_G0034270.1 mouse_genomes_project 8 128044640 128123124 - MGP_129S1SvImJ_P0090950 Pgbd5 protein_coding protein_coding MGP_129S1SvImJ_T0090951.1 MGP_129S1SvImJ_G0034270.1 mouse_genomes_project 8 128044644 128117826 - MGP_129S1SvImJ_P0090951 Pgbd5 protein_coding protein_coding MGP_129S1SvImJ_T0090952.1 MGP_129S1SvImJ_G0034270.1 mouse_genomes_project 8 128047465 128052292 - Pgbd5 protein_coding processed_transcript MGP_129S1SvImJ_T0090953.1 MGP_129S1SvImJ_G0034270.1 mouse_genomes_project 8 128047481 128051843 - Pgbd5 protein_coding retained_intron MGP_129S1SvImJ_T0090284.1 MGP_129S1SvImJ_G0034063.1 mouse_genomes_project 8 108179286 108200633 + MGP_129S1SvImJ_P0090284 Nutf2-ps1 protein_coding protein_coding MGP_129S1SvImJ_T0089563.1 MGP_129S1SvImJ_G0033824.1 mouse_genomes_project 8 83560145 83570720 - MGP_129S1SvImJ_P0089563 Zfp330 protein_coding protein_coding MGP_129S1SvImJ_T0090168.1 MGP_129S1SvImJ_G0034015.1 mouse_genomes_project 8 106768047 106778303 - MGP_129S1SvImJ_P0090168 Cdh16 protein_coding protein_coding MGP_129S1SvImJ_T0011032.1 MGP_129S1SvImJ_G0009148.1 mouse_genomes_project 8 110022767 110022837 + Mir140 miRNA miRNA MGP_129S1SvImJ_T0016021.1 MGP_129S1SvImJ_G0014110.1 mouse_genomes_project 8 127490711 127491078 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0088300.1 MGP_129S1SvImJ_G0033416.1 mouse_genomes_project 8 16675661 16678435 + MGP_129S1SvImJ_P0088300 Defb4 protein_coding protein_coding MGP_129S1SvImJ_T0088104.1 MGP_129S1SvImJ_G0033357.1 mouse_genomes_project 8 8841841 8865997 - MGP_129S1SvImJ_P0088104 Ankrd10 protein_coding protein_coding MGP_129S1SvImJ_T0088105.1 MGP_129S1SvImJ_G0033357.1 mouse_genomes_project 8 8844410 8865997 - MGP_129S1SvImJ_P0088105 Ankrd10 protein_coding protein_coding MGP_129S1SvImJ_T0089514.1 MGP_129S1SvImJ_G0033808.1 mouse_genomes_project 8 79448036 79465900 - MGP_129S1SvImJ_P0089514 Lsm6 protein_coding protein_coding MGP_129S1SvImJ_T0089515.1 MGP_129S1SvImJ_G0033808.1 mouse_genomes_project 8 79449622 79465900 - MGP_129S1SvImJ_P0089515 Lsm6 protein_coding protein_coding MGP_129S1SvImJ_T0089516.1 MGP_129S1SvImJ_G0033808.1 mouse_genomes_project 8 79451208 79453382 - Lsm6 protein_coding retained_intron MGP_129S1SvImJ_T0089517.1 MGP_129S1SvImJ_G0033808.1 mouse_genomes_project 8 79451229 79456386 - Lsm6 protein_coding retained_intron MGP_129S1SvImJ_T0005415.1 MGP_129S1SvImJ_G0004590.1 mouse_genomes_project 8 118752755 118754804 + Gm15655 antisense antisense MGP_129S1SvImJ_T0088526.1 MGP_129S1SvImJ_G0033504.1 mouse_genomes_project 8 25386358 25391482 - MGP_129S1SvImJ_P0088526 Got1l1 protein_coding protein_coding MGP_129S1SvImJ_T0011737.1 MGP_129S1SvImJ_G0009853.1 mouse_genomes_project 8 30070195 30070296 - Gm24184 misc_RNA misc_RNA MGP_129S1SvImJ_T0015996.1 MGP_129S1SvImJ_G0014085.1 mouse_genomes_project 8 80223169 80224144 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009176.1 MGP_129S1SvImJ_G0007373.1 mouse_genomes_project 8 101102307 101110332 + lincRNA lincRNA MGP_129S1SvImJ_T0090059.1 MGP_129S1SvImJ_G0033973.1 mouse_genomes_project 8 96306292 96317185 - MGP_129S1SvImJ_P0090059 Dok4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0088293.1 MGP_129S1SvImJ_G0033410.1 mouse_genomes_project 8 16542469 16547773 - MGP_129S1SvImJ_P0088293 Defb39 protein_coding protein_coding MGP_129S1SvImJ_T0088204.1 MGP_129S1SvImJ_G0033383.1 mouse_genomes_project 8 10908904 10920695 - MGP_129S1SvImJ_P0088204 1700029H14Rik protein_coding protein_coding MGP_129S1SvImJ_T0088205.1 MGP_129S1SvImJ_G0033383.1 mouse_genomes_project 8 10908904 10920682 - MGP_129S1SvImJ_P0088205 1700029H14Rik protein_coding protein_coding MGP_129S1SvImJ_T0088206.1 MGP_129S1SvImJ_G0033383.1 mouse_genomes_project 8 10909182 10920639 - MGP_129S1SvImJ_P0088206 1700029H14Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088207.1 MGP_129S1SvImJ_G0033383.1 mouse_genomes_project 8 10909203 10920638 - MGP_129S1SvImJ_P0088207 1700029H14Rik protein_coding protein_coding MGP_129S1SvImJ_T0088208.1 MGP_129S1SvImJ_G0033383.1 mouse_genomes_project 8 10914121 10920639 - MGP_129S1SvImJ_P0088208 1700029H14Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088233.1 MGP_129S1SvImJ_G0033393.1 mouse_genomes_project 8 11405425 11471612 - MGP_129S1SvImJ_P0088233 Erich1 protein_coding protein_coding MGP_129S1SvImJ_T0090041.1 MGP_129S1SvImJ_G0033970.1 mouse_genomes_project 8 96256095 96278167 - MGP_129S1SvImJ_P0090041 Ciapin1 protein_coding protein_coding MGP_129S1SvImJ_T0090042.1 MGP_129S1SvImJ_G0033970.1 mouse_genomes_project 8 96258834 96263010 - MGP_129S1SvImJ_P0090042 Ciapin1 protein_coding protein_coding MGP_129S1SvImJ_T0090043.1 MGP_129S1SvImJ_G0033970.1 mouse_genomes_project 8 96259208 96260470 - Ciapin1 protein_coding retained_intron MGP_129S1SvImJ_T0090044.1 MGP_129S1SvImJ_G0033970.1 mouse_genomes_project 8 96259294 96263016 - Ciapin1 protein_coding processed_transcript MGP_129S1SvImJ_T0090045.1 MGP_129S1SvImJ_G0033970.1 mouse_genomes_project 8 96259984 96270458 - MGP_129S1SvImJ_P0090045 Ciapin1 protein_coding protein_coding MGP_129S1SvImJ_T0090046.1 MGP_129S1SvImJ_G0033970.1 mouse_genomes_project 8 96260912 96263014 - Ciapin1 protein_coding retained_intron MGP_129S1SvImJ_T0090047.1 MGP_129S1SvImJ_G0033970.1 mouse_genomes_project 8 96261495 96268755 - Ciapin1 protein_coding processed_transcript MGP_129S1SvImJ_T0090048.1 MGP_129S1SvImJ_G0033970.1 mouse_genomes_project 8 96264369 96278074 - MGP_129S1SvImJ_P0090048 Ciapin1 protein_coding protein_coding MGP_129S1SvImJ_T0090049.1 MGP_129S1SvImJ_G0033970.1 mouse_genomes_project 8 96268706 96278070 - Ciapin1 protein_coding processed_transcript MGP_129S1SvImJ_T0090050.1 MGP_129S1SvImJ_G0033970.1 mouse_genomes_project 8 96270451 96277851 - Ciapin1 protein_coding processed_transcript MGP_129S1SvImJ_T0088978.1 MGP_129S1SvImJ_G0033644.1 mouse_genomes_project 8 64760209 64872346 - MGP_129S1SvImJ_P0088978 Klhl2 protein_coding protein_coding MGP_129S1SvImJ_T0010992.1 MGP_129S1SvImJ_G0009108.1 mouse_genomes_project 8 70351114 70351177 - Mir7066 miRNA miRNA MGP_129S1SvImJ_T0005350.1 MGP_129S1SvImJ_G0004538.1 mouse_genomes_project 8 10187462 10192121 - Gm15353 antisense antisense MGP_129S1SvImJ_T0005351.1 MGP_129S1SvImJ_G0004538.1 mouse_genomes_project 8 10187606 10192111 - Gm15353 antisense antisense MGP_129S1SvImJ_T0088542.1 MGP_129S1SvImJ_G0033513.1 mouse_genomes_project 8 29492300 29513006 + MGP_129S1SvImJ_P0088542 Rnf122 protein_coding protein_coding MGP_129S1SvImJ_T0088543.1 MGP_129S1SvImJ_G0033513.1 mouse_genomes_project 8 29492310 29503363 + Rnf122 protein_coding retained_intron MGP_129S1SvImJ_T0088544.1 MGP_129S1SvImJ_G0033513.1 mouse_genomes_project 8 29492628 29511180 + MGP_129S1SvImJ_P0088544 Rnf122 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089007.1 MGP_129S1SvImJ_G0033656.1 mouse_genomes_project 8 67585984 67587331 + MGP_129S1SvImJ_P0089007 Nat1 protein_coding protein_coding MGP_129S1SvImJ_T0099014.1 MGP_129S1SvImJ_G0037087.1 mouse_genomes_project 8 125441026 125441693 - sense_intronic sense_intronic MGP_129S1SvImJ_T0101419.1 MGP_129S1SvImJ_G0039486.1 mouse_genomes_project 8 121361647 121361777 + Gm25200 snoRNA snoRNA MGP_129S1SvImJ_T0088703.1 MGP_129S1SvImJ_G0033570.1 mouse_genomes_project 8 43951922 44072393 + MGP_129S1SvImJ_P0088703 Fat1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0088704.1 MGP_129S1SvImJ_G0033570.1 mouse_genomes_project 8 43952166 44073241 + MGP_129S1SvImJ_P0088704 Fat1 protein_coding protein_coding MGP_129S1SvImJ_T0088705.1 MGP_129S1SvImJ_G0033570.1 mouse_genomes_project 8 43966906 44073241 + MGP_129S1SvImJ_P0088705 Fat1 protein_coding protein_coding MGP_129S1SvImJ_T0088706.1 MGP_129S1SvImJ_G0033570.1 mouse_genomes_project 8 44054341 44073229 + MGP_129S1SvImJ_P0088706 Fat1 protein_coding protein_coding MGP_129S1SvImJ_T0088707.1 MGP_129S1SvImJ_G0033570.1 mouse_genomes_project 8 44065516 44071815 + MGP_129S1SvImJ_P0088707 Fat1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088708.1 MGP_129S1SvImJ_G0033570.1 mouse_genomes_project 8 44065516 44071815 + MGP_129S1SvImJ_P0088708 Fat1 protein_coding protein_coding MGP_129S1SvImJ_T0088709.1 MGP_129S1SvImJ_G0033570.1 mouse_genomes_project 8 44066118 44071484 + Fat1 protein_coding retained_intron MGP_129S1SvImJ_T0089855.1 MGP_129S1SvImJ_G0033908.1 mouse_genomes_project 8 87593834 87695818 + MGP_129S1SvImJ_P0089855 Lonp2 protein_coding protein_coding MGP_129S1SvImJ_T0089856.1 MGP_129S1SvImJ_G0033908.1 mouse_genomes_project 8 87593834 87703071 + MGP_129S1SvImJ_P0089856 Lonp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089857.1 MGP_129S1SvImJ_G0033908.1 mouse_genomes_project 8 87593878 87611969 + Lonp2 protein_coding processed_transcript MGP_129S1SvImJ_T0089858.1 MGP_129S1SvImJ_G0033908.1 mouse_genomes_project 8 87593896 87695818 + MGP_129S1SvImJ_P0089858 Lonp2 protein_coding protein_coding MGP_129S1SvImJ_T0089859.1 MGP_129S1SvImJ_G0033908.1 mouse_genomes_project 8 87601699 87645389 + Lonp2 protein_coding processed_transcript MGP_129S1SvImJ_T0089860.1 MGP_129S1SvImJ_G0033908.1 mouse_genomes_project 8 87621870 87695819 + MGP_129S1SvImJ_P0089860 Lonp2 protein_coding protein_coding MGP_129S1SvImJ_T0089861.1 MGP_129S1SvImJ_G0033908.1 mouse_genomes_project 8 87621870 87695819 + MGP_129S1SvImJ_P0089861 Lonp2 protein_coding protein_coding MGP_129S1SvImJ_T0089511.1 MGP_129S1SvImJ_G0033805.1 mouse_genomes_project 8 79048682 79052318 - MGP_129S1SvImJ_P0089511 Pou4f2 protein_coding protein_coding MGP_129S1SvImJ_T0089548.1 MGP_129S1SvImJ_G0033820.1 mouse_genomes_project 8 81490514 81610436 - MGP_129S1SvImJ_P0089548 Gab1 protein_coding protein_coding MGP_129S1SvImJ_T0005385.1 MGP_129S1SvImJ_G0004565.1 mouse_genomes_project 8 68502352 68506206 + 1700125H03Rik antisense antisense MGP_129S1SvImJ_T0005386.1 MGP_129S1SvImJ_G0004565.1 mouse_genomes_project 8 68502384 68509623 + 1700125H03Rik antisense antisense MGP_129S1SvImJ_T0089320.1 MGP_129S1SvImJ_G0033744.1 mouse_genomes_project 8 71796970 71800841 + MGP_129S1SvImJ_P0089320 Ankle1 protein_coding protein_coding MGP_129S1SvImJ_T0089321.1 MGP_129S1SvImJ_G0033744.1 mouse_genomes_project 8 71796976 71800805 + Ankle1 protein_coding retained_intron MGP_129S1SvImJ_T0089322.1 MGP_129S1SvImJ_G0033744.1 mouse_genomes_project 8 71796982 71800439 + Ankle1 protein_coding retained_intron MGP_129S1SvImJ_T0089323.1 MGP_129S1SvImJ_G0033744.1 mouse_genomes_project 8 71796984 71800446 + MGP_129S1SvImJ_P0089323 Ankle1 protein_coding protein_coding MGP_129S1SvImJ_T0089324.1 MGP_129S1SvImJ_G0033744.1 mouse_genomes_project 8 71798651 71800118 + Ankle1 protein_coding retained_intron MGP_129S1SvImJ_T0090405.1 MGP_129S1SvImJ_G0034105.1 mouse_genomes_project 8 112084845 112143107 + MGP_129S1SvImJ_P0090405 Pmfbp1 protein_coding protein_coding MGP_129S1SvImJ_T0090580.1 MGP_129S1SvImJ_G0034162.1 mouse_genomes_project 8 118728439 118754667 - MGP_129S1SvImJ_P0090580 Maf protein_coding protein_coding MGP_129S1SvImJ_T0090581.1 MGP_129S1SvImJ_G0034162.1 mouse_genomes_project 8 118749112 118755365 - MGP_129S1SvImJ_P0090581 Maf protein_coding protein_coding MGP_129S1SvImJ_T0089625.1 MGP_129S1SvImJ_G0033844.1 mouse_genomes_project 8 84833723 84858129 + MGP_129S1SvImJ_P0089625 Prkaca protein_coding protein_coding MGP_129S1SvImJ_T0090369.1 MGP_129S1SvImJ_G0034096.1 mouse_genomes_project 8 109476519 109480709 - MGP_129S1SvImJ_P0090369 Tmed6 protein_coding protein_coding MGP_129S1SvImJ_T0009105.1 MGP_129S1SvImJ_G0007322.1 mouse_genomes_project 8 40697073 40923051 + 2810404M03Rik lincRNA lincRNA MGP_129S1SvImJ_T0090769.1 MGP_129S1SvImJ_G0034219.1 mouse_genomes_project 8 125475155 125525306 + MGP_129S1SvImJ_P0090769 Banp protein_coding protein_coding MGP_129S1SvImJ_T0090770.1 MGP_129S1SvImJ_G0034219.1 mouse_genomes_project 8 125475897 125555288 + MGP_129S1SvImJ_P0090770 Banp protein_coding protein_coding MGP_129S1SvImJ_T0090771.1 MGP_129S1SvImJ_G0034219.1 mouse_genomes_project 8 125475949 125558405 + MGP_129S1SvImJ_P0090771 Banp protein_coding protein_coding MGP_129S1SvImJ_T0090772.1 MGP_129S1SvImJ_G0034219.1 mouse_genomes_project 8 125475980 125525304 + MGP_129S1SvImJ_P0090772 Banp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090773.1 MGP_129S1SvImJ_G0034219.1 mouse_genomes_project 8 125475985 125555057 + MGP_129S1SvImJ_P0090773 Banp protein_coding protein_coding MGP_129S1SvImJ_T0090774.1 MGP_129S1SvImJ_G0034219.1 mouse_genomes_project 8 125475990 125519689 + MGP_129S1SvImJ_P0090774 Banp protein_coding protein_coding MGP_129S1SvImJ_T0090775.1 MGP_129S1SvImJ_G0034219.1 mouse_genomes_project 8 125476001 125519680 + MGP_129S1SvImJ_P0090775 Banp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090776.1 MGP_129S1SvImJ_G0034219.1 mouse_genomes_project 8 125476010 125519706 + MGP_129S1SvImJ_P0090776 Banp protein_coding protein_coding MGP_129S1SvImJ_T0090777.1 MGP_129S1SvImJ_G0034219.1 mouse_genomes_project 8 125502856 125504912 + Banp protein_coding retained_intron MGP_129S1SvImJ_T0090778.1 MGP_129S1SvImJ_G0034219.1 mouse_genomes_project 8 125502904 125554755 + MGP_129S1SvImJ_P0090778 Banp protein_coding protein_coding MGP_129S1SvImJ_T0090779.1 MGP_129S1SvImJ_G0034219.1 mouse_genomes_project 8 125506746 125518122 + Banp protein_coding retained_intron MGP_129S1SvImJ_T0090780.1 MGP_129S1SvImJ_G0034219.1 mouse_genomes_project 8 125519577 125525361 + Banp protein_coding retained_intron MGP_129S1SvImJ_T0090781.1 MGP_129S1SvImJ_G0034219.1 mouse_genomes_project 8 125519723 125555069 + MGP_129S1SvImJ_P0090781 Banp protein_coding protein_coding MGP_129S1SvImJ_T0090782.1 MGP_129S1SvImJ_G0034219.1 mouse_genomes_project 8 125525211 125554727 + MGP_129S1SvImJ_P0090782 Banp protein_coding protein_coding MGP_129S1SvImJ_T0090783.1 MGP_129S1SvImJ_G0034219.1 mouse_genomes_project 8 125528790 125549761 + Banp protein_coding processed_transcript MGP_129S1SvImJ_T0090784.1 MGP_129S1SvImJ_G0034219.1 mouse_genomes_project 8 125528968 125536337 + Banp protein_coding retained_intron MGP_129S1SvImJ_T0090698.1 MGP_129S1SvImJ_G0034204.1 mouse_genomes_project 8 124094164 124108256 - MGP_129S1SvImJ_P0090698 Emc8 protein_coding protein_coding MGP_129S1SvImJ_T0090699.1 MGP_129S1SvImJ_G0034204.1 mouse_genomes_project 8 124096228 124108290 - Emc8 protein_coding retained_intron MGP_129S1SvImJ_T0090700.1 MGP_129S1SvImJ_G0034204.1 mouse_genomes_project 8 124098101 124108851 - MGP_129S1SvImJ_P0090700 Emc8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090701.1 MGP_129S1SvImJ_G0034204.1 mouse_genomes_project 8 124098274 124108041 - MGP_129S1SvImJ_P0090701 Emc8 protein_coding protein_coding MGP_129S1SvImJ_T0090702.1 MGP_129S1SvImJ_G0034204.1 mouse_genomes_project 8 124098300 124108114 - MGP_129S1SvImJ_P0090702 Emc8 protein_coding protein_coding MGP_129S1SvImJ_T0090703.1 MGP_129S1SvImJ_G0034204.1 mouse_genomes_project 8 124100224 124108281 - MGP_129S1SvImJ_P0090703 Emc8 protein_coding protein_coding MGP_129S1SvImJ_T0090704.1 MGP_129S1SvImJ_G0034204.1 mouse_genomes_project 8 124100897 124108391 - Emc8 protein_coding retained_intron MGP_129S1SvImJ_T0090406.1 MGP_129S1SvImJ_G0034106.1 mouse_genomes_project 8 112148207 112165776 - MGP_129S1SvImJ_P0090406 Dhx38 protein_coding protein_coding MGP_129S1SvImJ_T0102828.1 MGP_129S1SvImJ_G0040660.1 mouse_genomes_project 8 16686638 16689169 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0090298.1 MGP_129S1SvImJ_G0034070.1 mouse_genomes_project 8 108268776 108291584 - MGP_129S1SvImJ_P0090298 Slc12a4 protein_coding protein_coding MGP_129S1SvImJ_T0090299.1 MGP_129S1SvImJ_G0034070.1 mouse_genomes_project 8 108268776 108291655 - MGP_129S1SvImJ_P0090299 Slc12a4 protein_coding protein_coding MGP_129S1SvImJ_T0090300.1 MGP_129S1SvImJ_G0034070.1 mouse_genomes_project 8 108272021 108273504 - Slc12a4 protein_coding retained_intron MGP_129S1SvImJ_T0090301.1 MGP_129S1SvImJ_G0034070.1 mouse_genomes_project 8 108279211 108289960 - MGP_129S1SvImJ_P0090301 Slc12a4 protein_coding protein_coding MGP_129S1SvImJ_T0090302.1 MGP_129S1SvImJ_G0034070.1 mouse_genomes_project 8 108285837 108291614 - Slc12a4 protein_coding retained_intron MGP_129S1SvImJ_T0088007.1 MGP_129S1SvImJ_G0033324.1 mouse_genomes_project 8 1063720 1065445 - MGP_129S1SvImJ_P0088007 Cd209f protein_coding protein_coding MGP_129S1SvImJ_T0088008.1 MGP_129S1SvImJ_G0033324.1 mouse_genomes_project 8 1063745 1065071 - Cd209f protein_coding retained_intron MGP_129S1SvImJ_T0090534.1 MGP_129S1SvImJ_G0034143.1 mouse_genomes_project 8 114447427 114477714 + MGP_129S1SvImJ_P0090534 Zfp1 protein_coding protein_coding MGP_129S1SvImJ_T0090828.1 MGP_129S1SvImJ_G0034231.1 mouse_genomes_project 8 126127334 126129602 - MGP_129S1SvImJ_P0090828 Aprt protein_coding protein_coding MGP_129S1SvImJ_T0088393.1 MGP_129S1SvImJ_G0033464.1 mouse_genomes_project 8 21130596 21144425 - MGP_129S1SvImJ_P0088393 Gins4 protein_coding protein_coding MGP_129S1SvImJ_T0101392.1 MGP_129S1SvImJ_G0039459.1 mouse_genomes_project 8 65925570 65925705 + Gm26123 snoRNA snoRNA MGP_129S1SvImJ_T0009080.1 MGP_129S1SvImJ_G0007304.1 mouse_genomes_project 8 10528073 10536642 + 2810030D12Rik lincRNA lincRNA MGP_129S1SvImJ_T0009081.1 MGP_129S1SvImJ_G0007304.1 mouse_genomes_project 8 10528081 10536654 + 2810030D12Rik lincRNA lincRNA MGP_129S1SvImJ_T0009082.1 MGP_129S1SvImJ_G0007304.1 mouse_genomes_project 8 10528105 10529144 + 2810030D12Rik lincRNA lincRNA MGP_129S1SvImJ_T0009083.1 MGP_129S1SvImJ_G0007304.1 mouse_genomes_project 8 10528173 10536647 + 2810030D12Rik lincRNA lincRNA MGP_129S1SvImJ_T0090058.1 MGP_129S1SvImJ_G0033972.1 mouse_genomes_project 8 96298522 96305406 + MGP_129S1SvImJ_P0090058 Polr2c protein_coding protein_coding MGP_129S1SvImJ_T0087966.1 MGP_129S1SvImJ_G0033311.1 mouse_genomes_project 8 568175 570366 - Pcp2 protein_coding retained_intron MGP_129S1SvImJ_T0087967.1 MGP_129S1SvImJ_G0033311.1 mouse_genomes_project 8 568175 570366 - MGP_129S1SvImJ_P0087967 Pcp2 protein_coding protein_coding MGP_129S1SvImJ_T0087968.1 MGP_129S1SvImJ_G0033311.1 mouse_genomes_project 8 568181 570366 - Pcp2 protein_coding retained_intron MGP_129S1SvImJ_T0087969.1 MGP_129S1SvImJ_G0033311.1 mouse_genomes_project 8 568181 569823 - MGP_129S1SvImJ_P0087969 Pcp2 protein_coding protein_coding MGP_129S1SvImJ_T0087970.1 MGP_129S1SvImJ_G0033311.1 mouse_genomes_project 8 568181 570103 - MGP_129S1SvImJ_P0087970 Pcp2 protein_coding protein_coding MGP_129S1SvImJ_T0087971.1 MGP_129S1SvImJ_G0033311.1 mouse_genomes_project 8 568181 569870 - MGP_129S1SvImJ_P0087971 Pcp2 protein_coding protein_coding MGP_129S1SvImJ_T0087972.1 MGP_129S1SvImJ_G0033311.1 mouse_genomes_project 8 568184 570346 - Pcp2 protein_coding processed_transcript MGP_129S1SvImJ_T0101404.1 MGP_129S1SvImJ_G0039471.1 mouse_genomes_project 8 87955731 87955848 - Gm24781 snoRNA snoRNA MGP_129S1SvImJ_T0011033.1 MGP_129S1SvImJ_G0009149.1 mouse_genomes_project 8 111490042 111490121 + Mir3108 miRNA miRNA MGP_129S1SvImJ_T0089004.1 MGP_129S1SvImJ_G0033653.1 mouse_genomes_project 8 66739942 66747977 - MGP_129S1SvImJ_P0089004 Npy5r protein_coding protein_coding MGP_129S1SvImJ_T0088853.1 MGP_129S1SvImJ_G0033609.1 mouse_genomes_project 8 53179845 53233789 - MGP_129S1SvImJ_P0088853 Neil3 protein_coding protein_coding MGP_129S1SvImJ_T0088854.1 MGP_129S1SvImJ_G0033609.1 mouse_genomes_project 8 53199064 53205247 - Neil3 protein_coding processed_transcript MGP_129S1SvImJ_T0088855.1 MGP_129S1SvImJ_G0033609.1 mouse_genomes_project 8 53199064 53205301 - MGP_129S1SvImJ_P0088855 Neil3 protein_coding protein_coding MGP_129S1SvImJ_T0088856.1 MGP_129S1SvImJ_G0033609.1 mouse_genomes_project 8 53199090 53206382 - MGP_129S1SvImJ_P0088856 Neil3 protein_coding protein_coding MGP_129S1SvImJ_T0088857.1 MGP_129S1SvImJ_G0033609.1 mouse_genomes_project 8 53200303 53233690 - Neil3 protein_coding retained_intron MGP_129S1SvImJ_T0088858.1 MGP_129S1SvImJ_G0033609.1 mouse_genomes_project 8 53203326 53233402 - MGP_129S1SvImJ_P0088858 Neil3 protein_coding protein_coding MGP_129S1SvImJ_T0101399.1 MGP_129S1SvImJ_G0039466.1 mouse_genomes_project 8 76551104 76551231 - Gm22544 snoRNA snoRNA MGP_129S1SvImJ_T0090132.1 MGP_129S1SvImJ_G0034001.1 mouse_genomes_project 8 106278633 106332753 + MGP_129S1SvImJ_P0090132 Bean1 protein_coding protein_coding MGP_129S1SvImJ_T0090133.1 MGP_129S1SvImJ_G0034001.1 mouse_genomes_project 8 106278633 106332753 + MGP_129S1SvImJ_P0090133 Bean1 protein_coding protein_coding MGP_129S1SvImJ_T0090134.1 MGP_129S1SvImJ_G0034001.1 mouse_genomes_project 8 106278633 106332753 + MGP_129S1SvImJ_P0090134 Bean1 protein_coding protein_coding MGP_129S1SvImJ_T0090135.1 MGP_129S1SvImJ_G0034001.1 mouse_genomes_project 8 106278633 106332753 + MGP_129S1SvImJ_P0090135 Bean1 protein_coding protein_coding MGP_129S1SvImJ_T0088275.1 MGP_129S1SvImJ_G0033403.1 mouse_genomes_project 8 16042576 16273257 + MGP_129S1SvImJ_P0088275 Mcph1 protein_coding protein_coding MGP_129S1SvImJ_T0088276.1 MGP_129S1SvImJ_G0033403.1 mouse_genomes_project 8 16042609 16180404 + MGP_129S1SvImJ_P0088276 Mcph1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088277.1 MGP_129S1SvImJ_G0033403.1 mouse_genomes_project 8 16043023 16155576 + Mcph1 protein_coding retained_intron MGP_129S1SvImJ_T0088278.1 MGP_129S1SvImJ_G0033403.1 mouse_genomes_project 8 16043029 16090301 + MGP_129S1SvImJ_P0088278 Mcph1 protein_coding protein_coding MGP_129S1SvImJ_T0088279.1 MGP_129S1SvImJ_G0033403.1 mouse_genomes_project 8 16082962 16089280 + MGP_129S1SvImJ_P0088279 Mcph1 protein_coding protein_coding MGP_129S1SvImJ_T0088280.1 MGP_129S1SvImJ_G0033403.1 mouse_genomes_project 8 16089991 16110462 + MGP_129S1SvImJ_P0088280 Mcph1 protein_coding protein_coding MGP_129S1SvImJ_T0102829.1 MGP_129S1SvImJ_G0040661.1 mouse_genomes_project 8 16775190 16778620 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0098389.1 MGP_129S1SvImJ_G0036474.1 mouse_genomes_project 8 33523054 33524209 + pseudogene pseudogene MGP_129S1SvImJ_T0016016.1 MGP_129S1SvImJ_G0014105.1 mouse_genomes_project 8 114025936 114068498 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0088701.1 MGP_129S1SvImJ_G0033568.1 mouse_genomes_project 8 42607531 42610243 - MGP_129S1SvImJ_P0088701 protein_coding protein_coding MGP_129S1SvImJ_T0090556.1 MGP_129S1SvImJ_G0034155.1 mouse_genomes_project 8 116577654 116587247 + MGP_129S1SvImJ_P0090556 Mon1b protein_coding protein_coding MGP_129S1SvImJ_T0090557.1 MGP_129S1SvImJ_G0034155.1 mouse_genomes_project 8 116577867 116587247 + MGP_129S1SvImJ_P0090557 Mon1b protein_coding protein_coding MGP_129S1SvImJ_T0100135.1 MGP_129S1SvImJ_G0038202.1 mouse_genomes_project 8 104379588 104379651 + Gm24602 snRNA snRNA MGP_129S1SvImJ_T0090940.1 MGP_129S1SvImJ_G0034266.1 mouse_genomes_project 8 127593693 127628267 - MGP_129S1SvImJ_P0090940 Abcb10 protein_coding protein_coding MGP_129S1SvImJ_T0088292.1 MGP_129S1SvImJ_G0033409.1 mouse_genomes_project 8 16516455 16519604 - MGP_129S1SvImJ_P0088292 Defb38 protein_coding protein_coding MGP_129S1SvImJ_T0088565.1 MGP_129S1SvImJ_G0033526.1 mouse_genomes_project 8 32112707 32135668 + Gsr protein_coding processed_transcript MGP_129S1SvImJ_T0088566.1 MGP_129S1SvImJ_G0033526.1 mouse_genomes_project 8 32113406 32160692 + MGP_129S1SvImJ_P0088566 Gsr protein_coding protein_coding MGP_129S1SvImJ_T0088567.1 MGP_129S1SvImJ_G0033526.1 mouse_genomes_project 8 32130669 32146888 + Gsr protein_coding processed_transcript MGP_129S1SvImJ_T0089501.1 MGP_129S1SvImJ_G0033803.1 mouse_genomes_project 8 78250273 78322982 - MGP_129S1SvImJ_P0089501 Ednra protein_coding protein_coding MGP_129S1SvImJ_T0089502.1 MGP_129S1SvImJ_G0033803.1 mouse_genomes_project 8 78256936 78323010 - Ednra protein_coding retained_intron MGP_129S1SvImJ_T0009125.1 MGP_129S1SvImJ_G0007340.1 mouse_genomes_project 8 79958331 79970894 + Gm4890 lincRNA lincRNA MGP_129S1SvImJ_T0090733.1 MGP_129S1SvImJ_G0034209.1 mouse_genomes_project 8 124593539 124596264 + MGP_129S1SvImJ_P0090733 Foxc2 protein_coding protein_coding MGP_129S1SvImJ_T0089353.1 MGP_129S1SvImJ_G0033755.1 mouse_genomes_project 8 71981738 71999062 + MGP_129S1SvImJ_P0089353 Slc27a1 protein_coding protein_coding MGP_129S1SvImJ_T0011005.1 MGP_129S1SvImJ_G0009121.1 mouse_genomes_project 8 84957555 84957643 + Mir709 miRNA miRNA MGP_129S1SvImJ_T0090441.1 MGP_129S1SvImJ_G0034120.1 mouse_genomes_project 8 112716721 112739408 - MGP_129S1SvImJ_P0090441 Gm17720 protein_coding protein_coding MGP_129S1SvImJ_T0088165.1 MGP_129S1SvImJ_G0033368.1 mouse_genomes_project 8 10338595 10348352 + MGP_129S1SvImJ_P0088165 F7 protein_coding protein_coding MGP_129S1SvImJ_T0090248.1 MGP_129S1SvImJ_G0034045.1 mouse_genomes_project 8 107692602 107727350 + Lrrc36 protein_coding processed_transcript MGP_129S1SvImJ_T0090249.1 MGP_129S1SvImJ_G0034045.1 mouse_genomes_project 8 107692653 107707392 + Lrrc36 protein_coding processed_transcript MGP_129S1SvImJ_T0090250.1 MGP_129S1SvImJ_G0034045.1 mouse_genomes_project 8 107692653 107749926 + MGP_129S1SvImJ_P0090250 Lrrc36 protein_coding protein_coding MGP_129S1SvImJ_T0090251.1 MGP_129S1SvImJ_G0034045.1 mouse_genomes_project 8 107708128 107749924 + MGP_129S1SvImJ_P0090251 Lrrc36 protein_coding protein_coding MGP_129S1SvImJ_T0011034.1 MGP_129S1SvImJ_G0009150.1 mouse_genomes_project 8 113166175 113166235 + miRNA miRNA MGP_129S1SvImJ_T0090403.1 MGP_129S1SvImJ_G0034104.1 mouse_genomes_project 8 111243584 111344307 + MGP_129S1SvImJ_P0090403 Zfhx3 protein_coding protein_coding MGP_129S1SvImJ_T0090404.1 MGP_129S1SvImJ_G0034104.1 mouse_genomes_project 8 111254850 111515902 + MGP_129S1SvImJ_P0090404 Zfhx3 protein_coding protein_coding MGP_129S1SvImJ_T0089246.1 MGP_129S1SvImJ_G0033718.1 mouse_genomes_project 8 70959721 70965610 + MGP_129S1SvImJ_P0089246 Lsm4 protein_coding protein_coding MGP_129S1SvImJ_T0089247.1 MGP_129S1SvImJ_G0033718.1 mouse_genomes_project 8 70959905 70964906 + MGP_129S1SvImJ_P0089247 Lsm4 protein_coding protein_coding MGP_129S1SvImJ_T0089248.1 MGP_129S1SvImJ_G0033718.1 mouse_genomes_project 8 70964522 70964974 + Lsm4 protein_coding retained_intron MGP_129S1SvImJ_T0089339.1 MGP_129S1SvImJ_G0033749.1 mouse_genomes_project 8 71886327 71891639 + MGP_129S1SvImJ_P0089339 Gtpbp3 protein_coding protein_coding MGP_129S1SvImJ_T0089340.1 MGP_129S1SvImJ_G0033749.1 mouse_genomes_project 8 71886327 71891639 + MGP_129S1SvImJ_P0089340 Gtpbp3 protein_coding protein_coding MGP_129S1SvImJ_T0089341.1 MGP_129S1SvImJ_G0033749.1 mouse_genomes_project 8 71886945 71891639 + MGP_129S1SvImJ_P0089341 Gtpbp3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089342.1 MGP_129S1SvImJ_G0033749.1 mouse_genomes_project 8 71886952 71898557 + MGP_129S1SvImJ_P0089342 Gtpbp3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089343.1 MGP_129S1SvImJ_G0033749.1 mouse_genomes_project 8 71886958 71887805 + Gtpbp3 protein_coding retained_intron MGP_129S1SvImJ_T0089344.1 MGP_129S1SvImJ_G0033749.1 mouse_genomes_project 8 71886967 71891639 + Gtpbp3 protein_coding retained_intron MGP_129S1SvImJ_T0089345.1 MGP_129S1SvImJ_G0033749.1 mouse_genomes_project 8 71886975 71891639 + MGP_129S1SvImJ_P0089345 Gtpbp3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089346.1 MGP_129S1SvImJ_G0033749.1 mouse_genomes_project 8 71887685 71889644 + Gtpbp3 protein_coding retained_intron MGP_129S1SvImJ_T0088093.1 MGP_129S1SvImJ_G0033353.1 mouse_genomes_project 8 8661631 8690469 - MGP_129S1SvImJ_P0088093 Rab20 protein_coding protein_coding MGP_129S1SvImJ_T0088200.1 MGP_129S1SvImJ_G0033380.1 mouse_genomes_project 8 10756540 10773259 + MGP_129S1SvImJ_P0088200 Grk1 protein_coding protein_coding MGP_129S1SvImJ_T0088394.1 MGP_129S1SvImJ_G0033465.1 mouse_genomes_project 8 21148272 21164790 - MGP_129S1SvImJ_P0088394 Golga7 protein_coding protein_coding MGP_129S1SvImJ_T0088395.1 MGP_129S1SvImJ_G0033465.1 mouse_genomes_project 8 21148272 21164737 - MGP_129S1SvImJ_P0088395 Golga7 protein_coding protein_coding MGP_129S1SvImJ_T0088396.1 MGP_129S1SvImJ_G0033465.1 mouse_genomes_project 8 21149016 21151929 - Golga7 protein_coding retained_intron MGP_129S1SvImJ_T0088981.1 MGP_129S1SvImJ_G0033646.1 mouse_genomes_project 8 65003379 65009375 - MGP_129S1SvImJ_P0088981 Trim75 protein_coding protein_coding MGP_129S1SvImJ_T0101370.1 MGP_129S1SvImJ_G0039437.1 mouse_genomes_project 8 19369252 19369344 - snoRNA snoRNA MGP_129S1SvImJ_T0009205.1 MGP_129S1SvImJ_G0007396.1 mouse_genomes_project 8 125178642 125179106 + Gm27030 lincRNA lincRNA MGP_129S1SvImJ_T0009209.1 MGP_129S1SvImJ_G0007399.1 mouse_genomes_project 8 125800662 125803754 + Gm22 lincRNA lincRNA MGP_129S1SvImJ_T0009210.1 MGP_129S1SvImJ_G0007399.1 mouse_genomes_project 8 125800662 125803758 + Gm22 lincRNA lincRNA MGP_129S1SvImJ_T0100106.1 MGP_129S1SvImJ_G0038173.1 mouse_genomes_project 8 25637956 25638063 - Gm24410 snRNA snRNA MGP_129S1SvImJ_T0089912.1 MGP_129S1SvImJ_G0033926.1 mouse_genomes_project 8 91422444 91525123 - MGP_129S1SvImJ_P0089912 Tox3 protein_coding protein_coding MGP_129S1SvImJ_T0089913.1 MGP_129S1SvImJ_G0033926.1 mouse_genomes_project 8 91428121 91524930 - MGP_129S1SvImJ_P0089913 Tox3 protein_coding protein_coding MGP_129S1SvImJ_T0089914.1 MGP_129S1SvImJ_G0033926.1 mouse_genomes_project 8 91434065 91524925 - MGP_129S1SvImJ_P0089914 Tox3 protein_coding protein_coding MGP_129S1SvImJ_T0005396.1 MGP_129S1SvImJ_G0004574.1 mouse_genomes_project 8 95799858 95807596 - Gm15890 antisense antisense MGP_129S1SvImJ_T0088228.1 MGP_129S1SvImJ_G0033392.1 mouse_genomes_project 8 11324997 11347212 - MGP_129S1SvImJ_P0088228 Tdrp protein_coding protein_coding MGP_129S1SvImJ_T0088229.1 MGP_129S1SvImJ_G0033392.1 mouse_genomes_project 8 11325118 11326376 - Tdrp protein_coding processed_transcript MGP_129S1SvImJ_T0088230.1 MGP_129S1SvImJ_G0033392.1 mouse_genomes_project 8 11326744 11334798 - Tdrp protein_coding processed_transcript MGP_129S1SvImJ_T0088231.1 MGP_129S1SvImJ_G0033392.1 mouse_genomes_project 8 11327101 11347467 - MGP_129S1SvImJ_P0088231 Tdrp protein_coding protein_coding MGP_129S1SvImJ_T0088232.1 MGP_129S1SvImJ_G0033392.1 mouse_genomes_project 8 11345050 11347178 - Tdrp protein_coding retained_intron MGP_129S1SvImJ_T0088009.1 MGP_129S1SvImJ_G0033325.1 mouse_genomes_project 8 1146557 1170246 + protein_coding retained_intron MGP_129S1SvImJ_T0088010.1 MGP_129S1SvImJ_G0033325.1 mouse_genomes_project 8 1146557 1193014 + MGP_129S1SvImJ_P0088010 protein_coding protein_coding MGP_129S1SvImJ_T0088011.1 MGP_129S1SvImJ_G0033325.1 mouse_genomes_project 8 1146557 1178690 + MGP_129S1SvImJ_P0088011 protein_coding protein_coding MGP_129S1SvImJ_T0088012.1 MGP_129S1SvImJ_G0033325.1 mouse_genomes_project 8 1146564 1193187 + MGP_129S1SvImJ_P0088012 protein_coding protein_coding MGP_129S1SvImJ_T0088013.1 MGP_129S1SvImJ_G0033325.1 mouse_genomes_project 8 1146577 1193009 + MGP_129S1SvImJ_P0088013 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088014.1 MGP_129S1SvImJ_G0033325.1 mouse_genomes_project 8 1146591 1186691 + protein_coding retained_intron MGP_129S1SvImJ_T0088015.1 MGP_129S1SvImJ_G0033325.1 mouse_genomes_project 8 1146729 1193009 + MGP_129S1SvImJ_P0088015 protein_coding protein_coding MGP_129S1SvImJ_T0088016.1 MGP_129S1SvImJ_G0033325.1 mouse_genomes_project 8 1170553 1171395 + protein_coding retained_intron MGP_129S1SvImJ_T0088017.1 MGP_129S1SvImJ_G0033325.1 mouse_genomes_project 8 1176276 1188042 + protein_coding processed_transcript MGP_129S1SvImJ_T0088018.1 MGP_129S1SvImJ_G0033325.1 mouse_genomes_project 8 1185769 1190688 + protein_coding retained_intron MGP_129S1SvImJ_T0088019.1 MGP_129S1SvImJ_G0033325.1 mouse_genomes_project 8 1188337 1193005 + protein_coding retained_intron MGP_129S1SvImJ_T0088020.1 MGP_129S1SvImJ_G0033325.1 mouse_genomes_project 8 1188581 1191303 + protein_coding retained_intron MGP_129S1SvImJ_T0088021.1 MGP_129S1SvImJ_G0033325.1 mouse_genomes_project 8 1190691 1191566 + protein_coding retained_intron MGP_129S1SvImJ_T0088022.1 MGP_129S1SvImJ_G0033325.1 mouse_genomes_project 8 1191211 1196213 + MGP_129S1SvImJ_P0088022 protein_coding protein_coding MGP_129S1SvImJ_T0102834.1 MGP_129S1SvImJ_G0040666.1 mouse_genomes_project 8 19527533 19528360 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0098648.1 MGP_129S1SvImJ_G0036733.1 mouse_genomes_project 8 34375138 34375252 + Gm22216 rRNA rRNA MGP_129S1SvImJ_T0088436.1 MGP_129S1SvImJ_G0033476.1 mouse_genomes_project 8 22950434 23015175 - MGP_129S1SvImJ_P0088436 Adam9 protein_coding protein_coding MGP_129S1SvImJ_T0015980.1 MGP_129S1SvImJ_G0014069.1 mouse_genomes_project 8 39671827 39674830 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0088971.1 MGP_129S1SvImJ_G0033643.1 mouse_genomes_project 8 64735605 64753203 - MGP_129S1SvImJ_P0088971 Msmo1 protein_coding protein_coding MGP_129S1SvImJ_T0088972.1 MGP_129S1SvImJ_G0033643.1 mouse_genomes_project 8 64735675 64752992 - Msmo1 protein_coding processed_transcript MGP_129S1SvImJ_T0088973.1 MGP_129S1SvImJ_G0033643.1 mouse_genomes_project 8 64735693 64752989 - Msmo1 protein_coding retained_intron MGP_129S1SvImJ_T0088974.1 MGP_129S1SvImJ_G0033643.1 mouse_genomes_project 8 64736090 64739398 - Msmo1 protein_coding processed_transcript MGP_129S1SvImJ_T0088975.1 MGP_129S1SvImJ_G0033643.1 mouse_genomes_project 8 64741723 64750510 - MGP_129S1SvImJ_P0088975 Msmo1 protein_coding protein_coding MGP_129S1SvImJ_T0088976.1 MGP_129S1SvImJ_G0033643.1 mouse_genomes_project 8 64743039 64752959 - Msmo1 protein_coding retained_intron MGP_129S1SvImJ_T0088977.1 MGP_129S1SvImJ_G0033643.1 mouse_genomes_project 8 64747158 64752959 - MGP_129S1SvImJ_P0088977 Msmo1 protein_coding protein_coding MGP_129S1SvImJ_T0089192.1 MGP_129S1SvImJ_G0033704.1 mouse_genomes_project 8 70648131 70707175 - Crtc1 protein_coding retained_intron MGP_129S1SvImJ_T0089193.1 MGP_129S1SvImJ_G0033704.1 mouse_genomes_project 8 70648131 70707175 - MGP_129S1SvImJ_P0089193 Crtc1 protein_coding protein_coding MGP_129S1SvImJ_T0089194.1 MGP_129S1SvImJ_G0033704.1 mouse_genomes_project 8 70663514 70668581 - Crtc1 protein_coding retained_intron MGP_129S1SvImJ_T0089195.1 MGP_129S1SvImJ_G0033704.1 mouse_genomes_project 8 70670621 70707171 - Crtc1 protein_coding retained_intron MGP_129S1SvImJ_T0089196.1 MGP_129S1SvImJ_G0033704.1 mouse_genomes_project 8 70671898 70698968 - Crtc1 protein_coding processed_transcript MGP_129S1SvImJ_T0011038.1 MGP_129S1SvImJ_G0009154.1 mouse_genomes_project 8 113938429 113938511 + Gm23193 miRNA miRNA MGP_129S1SvImJ_T0005376.1 MGP_129S1SvImJ_G0004557.1 mouse_genomes_project 8 54231449 54266521 - 5330439A09Rik antisense antisense MGP_129S1SvImJ_T0002353.1 MGP_129S1SvImJ_G0002264.1 mouse_genomes_project 8 43224881 43225709 - TEC TEC MGP_129S1SvImJ_T0090361.1 MGP_129S1SvImJ_G0034093.1 mouse_genomes_project 8 109453928 109456414 - MGP_129S1SvImJ_P0090361 Pdf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090364.1 MGP_129S1SvImJ_G0034093.1 mouse_genomes_project 8 109455747 109457855 - MGP_129S1SvImJ_P0090364 Pdf protein_coding protein_coding MGP_129S1SvImJ_T0090401.1 MGP_129S1SvImJ_G0034102.1 mouse_genomes_project 8 109896969 110031221 + MGP_129S1SvImJ_P0090401 Wwp2 protein_coding protein_coding MGP_129S1SvImJ_T0002348.1 MGP_129S1SvImJ_G0002259.1 mouse_genomes_project 8 1518353 1518568 - TEC TEC MGP_129S1SvImJ_T0090764.1 MGP_129S1SvImJ_G0034217.1 mouse_genomes_project 8 125399400 125427742 - MGP_129S1SvImJ_P0090764 Slc7a5 protein_coding protein_coding MGP_129S1SvImJ_T0090765.1 MGP_129S1SvImJ_G0034217.1 mouse_genomes_project 8 125401054 125402167 - Slc7a5 protein_coding retained_intron MGP_129S1SvImJ_T0090766.1 MGP_129S1SvImJ_G0034217.1 mouse_genomes_project 8 125406626 125414758 - Slc7a5 protein_coding processed_transcript MGP_129S1SvImJ_T0089562.1 MGP_129S1SvImJ_G0033823.1 mouse_genomes_project 8 83106432 83191670 - MGP_129S1SvImJ_P0089562 Il15 protein_coding protein_coding MGP_129S1SvImJ_T0090233.1 MGP_129S1SvImJ_G0034041.1 mouse_genomes_project 8 107601474 107621794 - Fhod1 protein_coding retained_intron MGP_129S1SvImJ_T0090234.1 MGP_129S1SvImJ_G0034041.1 mouse_genomes_project 8 107601474 107621838 - MGP_129S1SvImJ_P0090234 Fhod1 protein_coding protein_coding MGP_129S1SvImJ_T0090235.1 MGP_129S1SvImJ_G0034041.1 mouse_genomes_project 8 107603251 107603878 - Fhod1 protein_coding retained_intron MGP_129S1SvImJ_T0090236.1 MGP_129S1SvImJ_G0034041.1 mouse_genomes_project 8 107608859 107610214 - Fhod1 protein_coding retained_intron MGP_129S1SvImJ_T0009118.1 MGP_129S1SvImJ_G0007334.1 mouse_genomes_project 8 71079914 71080923 + 2010320M18Rik lincRNA lincRNA MGP_129S1SvImJ_T0005356.1 MGP_129S1SvImJ_G0004541.1 mouse_genomes_project 8 12383267 12383788 - Gm16350 antisense antisense MGP_129S1SvImJ_T0090898.1 MGP_129S1SvImJ_G0034251.1 mouse_genomes_project 8 126871501 126926891 - MGP_129S1SvImJ_P0090898 Fanca protein_coding protein_coding MGP_129S1SvImJ_T0090899.1 MGP_129S1SvImJ_G0034251.1 mouse_genomes_project 8 126872491 126877427 - Fanca protein_coding processed_transcript MGP_129S1SvImJ_T0090900.1 MGP_129S1SvImJ_G0034251.1 mouse_genomes_project 8 126874212 126881069 - MGP_129S1SvImJ_P0090900 Fanca protein_coding protein_coding MGP_129S1SvImJ_T0090901.1 MGP_129S1SvImJ_G0034251.1 mouse_genomes_project 8 126877361 126879936 - MGP_129S1SvImJ_P0090901 Fanca protein_coding protein_coding MGP_129S1SvImJ_T0090902.1 MGP_129S1SvImJ_G0034251.1 mouse_genomes_project 8 126880870 126887292 - Fanca protein_coding retained_intron MGP_129S1SvImJ_T0090903.1 MGP_129S1SvImJ_G0034251.1 mouse_genomes_project 8 126892348 126926875 - Fanca protein_coding retained_intron MGP_129S1SvImJ_T0090904.1 MGP_129S1SvImJ_G0034251.1 mouse_genomes_project 8 126892567 126919476 - MGP_129S1SvImJ_P0090904 Fanca protein_coding protein_coding MGP_129S1SvImJ_T0090905.1 MGP_129S1SvImJ_G0034251.1 mouse_genomes_project 8 126895525 126898028 - Fanca protein_coding retained_intron MGP_129S1SvImJ_T0090906.1 MGP_129S1SvImJ_G0034251.1 mouse_genomes_project 8 126908614 126926875 - MGP_129S1SvImJ_P0090906 Fanca protein_coding protein_coding MGP_129S1SvImJ_T0090907.1 MGP_129S1SvImJ_G0034251.1 mouse_genomes_project 8 126918401 126926875 - Fanca protein_coding retained_intron MGP_129S1SvImJ_T0089541.1 MGP_129S1SvImJ_G0033818.1 mouse_genomes_project 8 81340509 81418509 + MGP_129S1SvImJ_P0089541 Frem3 protein_coding protein_coding MGP_129S1SvImJ_T0090831.1 MGP_129S1SvImJ_G0034234.1 mouse_genomes_project 8 126172289 126178452 + MGP_129S1SvImJ_P0090831 Trappc2l protein_coding protein_coding MGP_129S1SvImJ_T0090446.1 MGP_129S1SvImJ_G0034124.1 mouse_genomes_project 8 112925329 113288225 + MGP_129S1SvImJ_P0090446 Hydin protein_coding protein_coding MGP_129S1SvImJ_T0009076.1 MGP_129S1SvImJ_G0007300.1 mouse_genomes_project 8 8689759 8692055 + E230013L22Rik lincRNA lincRNA MGP_129S1SvImJ_T0089216.1 MGP_129S1SvImJ_G0033710.1 mouse_genomes_project 8 70776752 70794476 - MGP_129S1SvImJ_P0089216 Kxd1 protein_coding protein_coding MGP_129S1SvImJ_T0089220.1 MGP_129S1SvImJ_G0033710.1 mouse_genomes_project 8 70776930 70800211 - MGP_129S1SvImJ_P0089220 Kxd1 protein_coding protein_coding MGP_129S1SvImJ_T0089221.1 MGP_129S1SvImJ_G0033710.1 mouse_genomes_project 8 70782883 70794493 - MGP_129S1SvImJ_P0089221 Kxd1 protein_coding protein_coding MGP_129S1SvImJ_T0089222.1 MGP_129S1SvImJ_G0033710.1 mouse_genomes_project 8 70783091 70794592 - MGP_129S1SvImJ_P0089222 Kxd1 protein_coding protein_coding MGP_129S1SvImJ_T0089223.1 MGP_129S1SvImJ_G0033710.1 mouse_genomes_project 8 70783614 70794493 - MGP_129S1SvImJ_P0089223 Kxd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089224.1 MGP_129S1SvImJ_G0033710.1 mouse_genomes_project 8 70784177 70800211 - MGP_129S1SvImJ_P0089224 Kxd1 protein_coding protein_coding MGP_129S1SvImJ_T0089225.1 MGP_129S1SvImJ_G0033710.1 mouse_genomes_project 8 70784883 70794403 - MGP_129S1SvImJ_P0089225 Kxd1 protein_coding protein_coding MGP_129S1SvImJ_T0089226.1 MGP_129S1SvImJ_G0033710.1 mouse_genomes_project 8 70789784 70800038 - MGP_129S1SvImJ_P0089226 Kxd1 protein_coding protein_coding MGP_129S1SvImJ_T0089227.1 MGP_129S1SvImJ_G0033710.1 mouse_genomes_project 8 70790444 70794417 - Kxd1 protein_coding retained_intron MGP_129S1SvImJ_T0090541.1 MGP_129S1SvImJ_G0034149.1 mouse_genomes_project 8 114744755 114766652 - MGP_129S1SvImJ_P0090541 Tmem231 protein_coding protein_coding MGP_129S1SvImJ_T0088040.1 MGP_129S1SvImJ_G0033330.1 mouse_genomes_project 8 1238488 1241616 + MGP_129S1SvImJ_P0088040 Snapc2 protein_coding protein_coding MGP_129S1SvImJ_T0090283.1 MGP_129S1SvImJ_G0034062.1 mouse_genomes_project 8 108173630 108175478 + MGP_129S1SvImJ_P0090283 Thap11 protein_coding protein_coding MGP_129S1SvImJ_T0088608.1 MGP_129S1SvImJ_G0033539.1 mouse_genomes_project 8 34207168 34302009 + MGP_129S1SvImJ_P0088608 Mfhas1 protein_coding protein_coding MGP_129S1SvImJ_T0088609.1 MGP_129S1SvImJ_G0033539.1 mouse_genomes_project 8 34226721 34299403 + Mfhas1 protein_coding processed_transcript MGP_129S1SvImJ_T0088817.1 MGP_129S1SvImJ_G0033595.1 mouse_genomes_project 8 46580063 46582282 + MGP_129S1SvImJ_P0088817 protein_coding protein_coding MGP_129S1SvImJ_T0087997.1 MGP_129S1SvImJ_G0033319.1 mouse_genomes_project 8 827385 833846 - MGP_129S1SvImJ_P0087997 Cd209e protein_coding protein_coding MGP_129S1SvImJ_T0002356.1 MGP_129S1SvImJ_G0002267.1 mouse_genomes_project 8 86364982 86365612 + TEC TEC MGP_129S1SvImJ_T0002357.1 MGP_129S1SvImJ_G0002267.1 mouse_genomes_project 8 86364982 86365620 + TEC TEC MGP_129S1SvImJ_T0101405.1 MGP_129S1SvImJ_G0039472.1 mouse_genomes_project 8 90813271 90813403 - Gm24212 snoRNA snoRNA MGP_129S1SvImJ_T0089968.1 MGP_129S1SvImJ_G0033945.1 mouse_genomes_project 8 94629271 94652772 - MGP_129S1SvImJ_P0089968 Ces1f protein_coding protein_coding MGP_129S1SvImJ_T0089969.1 MGP_129S1SvImJ_G0033945.1 mouse_genomes_project 8 94629623 94631775 - Ces1f protein_coding retained_intron MGP_129S1SvImJ_T0089970.1 MGP_129S1SvImJ_G0033945.1 mouse_genomes_project 8 94638428 94640320 - Ces1f protein_coding retained_intron MGP_129S1SvImJ_T0089971.1 MGP_129S1SvImJ_G0033945.1 mouse_genomes_project 8 94638880 94640447 - Ces1f protein_coding retained_intron MGP_129S1SvImJ_T0089972.1 MGP_129S1SvImJ_G0033945.1 mouse_genomes_project 8 94646966 94648389 - Ces1f protein_coding retained_intron MGP_129S1SvImJ_T0089973.1 MGP_129S1SvImJ_G0033945.1 mouse_genomes_project 8 94647275 94652752 - MGP_129S1SvImJ_P0089973 Ces1f protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090933.1 MGP_129S1SvImJ_G0034261.1 mouse_genomes_project 8 127440942 127469528 + MGP_129S1SvImJ_P0090933 Rab4a protein_coding protein_coding MGP_129S1SvImJ_T0090934.1 MGP_129S1SvImJ_G0034261.1 mouse_genomes_project 8 127441025 127468726 + MGP_129S1SvImJ_P0090934 Rab4a protein_coding protein_coding MGP_129S1SvImJ_T0088123.1 MGP_129S1SvImJ_G0033365.1 mouse_genomes_project 8 9913474 9972816 - MGP_129S1SvImJ_P0088123 Tubgcp3 protein_coding protein_coding MGP_129S1SvImJ_T0088124.1 MGP_129S1SvImJ_G0033365.1 mouse_genomes_project 8 9913474 9972667 - MGP_129S1SvImJ_P0088124 Tubgcp3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088125.1 MGP_129S1SvImJ_G0033365.1 mouse_genomes_project 8 9913476 9936815 - Tubgcp3 protein_coding retained_intron MGP_129S1SvImJ_T0088126.1 MGP_129S1SvImJ_G0033365.1 mouse_genomes_project 8 9914372 9936788 - Tubgcp3 protein_coding retained_intron MGP_129S1SvImJ_T0088127.1 MGP_129S1SvImJ_G0033365.1 mouse_genomes_project 8 9920628 9956324 - Tubgcp3 protein_coding retained_intron MGP_129S1SvImJ_T0088128.1 MGP_129S1SvImJ_G0033365.1 mouse_genomes_project 8 9929236 9972691 - Tubgcp3 protein_coding retained_intron MGP_129S1SvImJ_T0088129.1 MGP_129S1SvImJ_G0033365.1 mouse_genomes_project 8 9948748 9954587 - Tubgcp3 protein_coding retained_intron MGP_129S1SvImJ_T0088130.1 MGP_129S1SvImJ_G0033365.1 mouse_genomes_project 8 9952927 9956338 - MGP_129S1SvImJ_P0088130 Tubgcp3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088131.1 MGP_129S1SvImJ_G0033365.1 mouse_genomes_project 8 9952962 9972527 - MGP_129S1SvImJ_P0088131 Tubgcp3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089051.1 MGP_129S1SvImJ_G0033666.1 mouse_genomes_project 8 69282134 69338044 - MGP_129S1SvImJ_P0089051 Lzts1 protein_coding protein_coding MGP_129S1SvImJ_T0089052.1 MGP_129S1SvImJ_G0033666.1 mouse_genomes_project 8 69284969 69290427 - MGP_129S1SvImJ_P0089052 Lzts1 protein_coding protein_coding MGP_129S1SvImJ_T0089053.1 MGP_129S1SvImJ_G0033666.1 mouse_genomes_project 8 69319795 69338034 - Lzts1 protein_coding processed_transcript MGP_129S1SvImJ_T0089054.1 MGP_129S1SvImJ_G0033666.1 mouse_genomes_project 8 69335954 69338024 - Lzts1 protein_coding processed_transcript MGP_129S1SvImJ_T0089055.1 MGP_129S1SvImJ_G0033666.1 mouse_genomes_project 8 69337530 69338008 - Lzts1 protein_coding retained_intron MGP_129S1SvImJ_T0098646.1 MGP_129S1SvImJ_G0036731.1 mouse_genomes_project 8 6691831 6691949 - n-R5s95 rRNA rRNA MGP_129S1SvImJ_T0089451.1 MGP_129S1SvImJ_G0033787.1 mouse_genomes_project 8 73085332 73100641 + MGP_129S1SvImJ_P0089451 Tmem38a protein_coding protein_coding MGP_129S1SvImJ_T0088699.1 MGP_129S1SvImJ_G0033566.1 mouse_genomes_project 8 42219324 42232065 - MGP_129S1SvImJ_P0088699 Zfp42 protein_coding protein_coding MGP_129S1SvImJ_T0089767.1 MGP_129S1SvImJ_G0033882.1 mouse_genomes_project 8 85899539 85908784 - MGP_129S1SvImJ_P0089767 Rnaseh2a protein_coding protein_coding MGP_129S1SvImJ_T0089768.1 MGP_129S1SvImJ_G0033882.1 mouse_genomes_project 8 85900631 85908862 - MGP_129S1SvImJ_P0089768 Rnaseh2a protein_coding protein_coding MGP_129S1SvImJ_T0089769.1 MGP_129S1SvImJ_G0033882.1 mouse_genomes_project 8 85900642 85901080 - Rnaseh2a protein_coding retained_intron MGP_129S1SvImJ_T0089770.1 MGP_129S1SvImJ_G0033882.1 mouse_genomes_project 8 85900937 85908759 - Rnaseh2a protein_coding retained_intron MGP_129S1SvImJ_T0089771.1 MGP_129S1SvImJ_G0033882.1 mouse_genomes_project 8 85908404 85912524 - MGP_129S1SvImJ_P0089771 Rnaseh2a protein_coding protein_coding MGP_129S1SvImJ_T0089772.1 MGP_129S1SvImJ_G0033882.1 mouse_genomes_project 8 85908749 85909675 - MGP_129S1SvImJ_P0089772 Rnaseh2a protein_coding protein_coding MGP_129S1SvImJ_T0089773.1 MGP_129S1SvImJ_G0033882.1 mouse_genomes_project 8 85909026 85912339 - Rnaseh2a protein_coding processed_transcript MGP_129S1SvImJ_T0088132.1 MGP_129S1SvImJ_G0033366.1 mouse_genomes_project 8 10062687 10174420 + MGP_129S1SvImJ_P0088132 Atp11a protein_coding protein_coding MGP_129S1SvImJ_T0088133.1 MGP_129S1SvImJ_G0033366.1 mouse_genomes_project 8 10062689 10174420 + MGP_129S1SvImJ_P0088133 Atp11a protein_coding protein_coding MGP_129S1SvImJ_T0088134.1 MGP_129S1SvImJ_G0033366.1 mouse_genomes_project 8 10062742 10165412 + MGP_129S1SvImJ_P0088134 Atp11a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088135.1 MGP_129S1SvImJ_G0033366.1 mouse_genomes_project 8 10117117 10120085 + Atp11a protein_coding retained_intron MGP_129S1SvImJ_T0088136.1 MGP_129S1SvImJ_G0033366.1 mouse_genomes_project 8 10128097 10134235 + Atp11a protein_coding retained_intron MGP_129S1SvImJ_T0088137.1 MGP_129S1SvImJ_G0033366.1 mouse_genomes_project 8 10140864 10174359 + MGP_129S1SvImJ_P0088137 Atp11a protein_coding protein_coding MGP_129S1SvImJ_T0088138.1 MGP_129S1SvImJ_G0033366.1 mouse_genomes_project 8 10153554 10162958 + MGP_129S1SvImJ_P0088138 Atp11a protein_coding protein_coding MGP_129S1SvImJ_T0088139.1 MGP_129S1SvImJ_G0033366.1 mouse_genomes_project 8 10155540 10157424 + Atp11a protein_coding processed_transcript MGP_129S1SvImJ_T0088140.1 MGP_129S1SvImJ_G0033366.1 mouse_genomes_project 8 10162647 10167897 + MGP_129S1SvImJ_P0088140 Atp11a protein_coding protein_coding MGP_129S1SvImJ_T0088141.1 MGP_129S1SvImJ_G0033366.1 mouse_genomes_project 8 10163653 10167894 + MGP_129S1SvImJ_P0088141 Atp11a protein_coding protein_coding MGP_129S1SvImJ_T0088142.1 MGP_129S1SvImJ_G0033366.1 mouse_genomes_project 8 10167256 10171262 + Atp11a protein_coding retained_intron MGP_129S1SvImJ_T0090184.1 MGP_129S1SvImJ_G0034022.1 mouse_genomes_project 8 107137420 107149935 + MGP_129S1SvImJ_P0090184 Ces2f protein_coding protein_coding MGP_129S1SvImJ_T0090501.1 MGP_129S1SvImJ_G0034137.1 mouse_genomes_project 8 113893730 114014537 - MGP_129S1SvImJ_P0090501 Glg1 protein_coding protein_coding MGP_129S1SvImJ_T0090502.1 MGP_129S1SvImJ_G0034137.1 mouse_genomes_project 8 113896834 113917031 - MGP_129S1SvImJ_P0090502 Glg1 protein_coding protein_coding MGP_129S1SvImJ_T0090503.1 MGP_129S1SvImJ_G0034137.1 mouse_genomes_project 8 113896874 114014521 - MGP_129S1SvImJ_P0090503 Glg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090504.1 MGP_129S1SvImJ_G0034137.1 mouse_genomes_project 8 113897207 114014537 - MGP_129S1SvImJ_P0090504 Glg1 protein_coding protein_coding MGP_129S1SvImJ_T0010990.1 MGP_129S1SvImJ_G0009106.1 mouse_genomes_project 8 65122781 65122865 - Gm23419 miRNA miRNA MGP_129S1SvImJ_T0089441.1 MGP_129S1SvImJ_G0033782.1 mouse_genomes_project 8 72939628 72959022 + MGP_129S1SvImJ_P0089441 1700030K09Rik protein_coding protein_coding MGP_129S1SvImJ_T0089442.1 MGP_129S1SvImJ_G0033782.1 mouse_genomes_project 8 72939680 72958662 + MGP_129S1SvImJ_P0089442 1700030K09Rik protein_coding protein_coding MGP_129S1SvImJ_T0089443.1 MGP_129S1SvImJ_G0033782.1 mouse_genomes_project 8 72953858 72954838 + 1700030K09Rik protein_coding retained_intron MGP_129S1SvImJ_T0100134.1 MGP_129S1SvImJ_G0038201.1 mouse_genomes_project 8 100335285 100335411 - Gm23494 snRNA snRNA MGP_129S1SvImJ_T0002354.1 MGP_129S1SvImJ_G0002265.1 mouse_genomes_project 8 76073116 76073523 - TEC TEC MGP_129S1SvImJ_T0089398.1 MGP_129S1SvImJ_G0033765.1 mouse_genomes_project 8 72355093 72362691 + MGP_129S1SvImJ_P0089398 Zfp882 protein_coding protein_coding MGP_129S1SvImJ_T0089400.1 MGP_129S1SvImJ_G0033765.1 mouse_genomes_project 8 72355142 72360052 + MGP_129S1SvImJ_P0089400 Zfp882 protein_coding protein_coding MGP_129S1SvImJ_T0089401.1 MGP_129S1SvImJ_G0033765.1 mouse_genomes_project 8 72355390 72360056 + MGP_129S1SvImJ_P0089401 Zfp882 protein_coding protein_coding MGP_129S1SvImJ_T0090337.1 MGP_129S1SvImJ_G0034081.1 mouse_genomes_project 8 108611446 108701556 - MGP_129S1SvImJ_P0090337 Smpd3 protein_coding protein_coding MGP_129S1SvImJ_T0090210.1 MGP_129S1SvImJ_G0034031.1 mouse_genomes_project 8 107523881 107529926 - MGP_129S1SvImJ_P0090210 Tradd protein_coding protein_coding MGP_129S1SvImJ_T0090211.1 MGP_129S1SvImJ_G0034031.1 mouse_genomes_project 8 107524785 107525716 - Tradd protein_coding retained_intron MGP_129S1SvImJ_T0090212.1 MGP_129S1SvImJ_G0034031.1 mouse_genomes_project 8 107524878 107529898 - MGP_129S1SvImJ_P0090212 Tradd protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090213.1 MGP_129S1SvImJ_G0034031.1 mouse_genomes_project 8 107525352 107529920 - MGP_129S1SvImJ_P0090213 Tradd protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088324.1 MGP_129S1SvImJ_G0033439.1 mouse_genomes_project 8 19783360 19785431 + MGP_129S1SvImJ_P0088324 Defb13 protein_coding protein_coding MGP_129S1SvImJ_T0009074.1 MGP_129S1SvImJ_G0007299.1 mouse_genomes_project 8 8199487 8249232 + 9530052E02Rik lincRNA lincRNA MGP_129S1SvImJ_T0009075.1 MGP_129S1SvImJ_G0007299.1 mouse_genomes_project 8 8244277 8249237 + 9530052E02Rik lincRNA lincRNA MGP_129S1SvImJ_T0089819.1 MGP_129S1SvImJ_G0033897.1 mouse_genomes_project 8 86166073 86167012 + MGP_129S1SvImJ_P0089819 Olfr371 protein_coding protein_coding MGP_129S1SvImJ_T0088309.1 MGP_129S1SvImJ_G0033424.1 mouse_genomes_project 8 18677226 18682856 - MGP_129S1SvImJ_P0088309 Gm6040 protein_coding protein_coding MGP_129S1SvImJ_T0088689.1 MGP_129S1SvImJ_G0033561.1 mouse_genomes_project 8 40069665 40164975 + MGP_129S1SvImJ_P0088689 Pcm1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0088690.1 MGP_129S1SvImJ_G0033561.1 mouse_genomes_project 8 40069729 40167061 + MGP_129S1SvImJ_P0088690 Pcm1 protein_coding protein_coding MGP_129S1SvImJ_T0088122.1 MGP_129S1SvImJ_G0033364.1 mouse_genomes_project 8 9874229 9900026 + MGP_129S1SvImJ_P0088122 Spaca7 protein_coding protein_coding MGP_129S1SvImJ_T0090425.1 MGP_129S1SvImJ_G0034113.1 mouse_genomes_project 8 112340268 112351562 - MGP_129S1SvImJ_P0090425 Atxn1l protein_coding protein_coding MGP_129S1SvImJ_T0088196.1 MGP_129S1SvImJ_G0033377.1 mouse_genomes_project 8 10627614 10664499 + MGP_129S1SvImJ_P0088196 Tmco3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0088197.1 MGP_129S1SvImJ_G0033377.1 mouse_genomes_project 8 10627644 10666126 + MGP_129S1SvImJ_P0088197 Tmco3 protein_coding protein_coding MGP_129S1SvImJ_T0099010.1 MGP_129S1SvImJ_G0037083.1 mouse_genomes_project 8 67917385 67917775 - sense_intronic sense_intronic MGP_129S1SvImJ_T0102833.1 MGP_129S1SvImJ_G0040665.1 mouse_genomes_project 8 19369512 19369680 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0101375.1 MGP_129S1SvImJ_G0039442.1 mouse_genomes_project 8 29539027 29539131 - Snord13 snoRNA snoRNA MGP_129S1SvImJ_T0089481.1 MGP_129S1SvImJ_G0033797.1 mouse_genomes_project 8 75663869 75674106 + MGP_129S1SvImJ_P0089481 Rasd2 protein_coding protein_coding MGP_129S1SvImJ_T0089482.1 MGP_129S1SvImJ_G0033797.1 mouse_genomes_project 8 75664427 75672408 + MGP_129S1SvImJ_P0089482 Rasd2 protein_coding protein_coding MGP_129S1SvImJ_T0002362.1 MGP_129S1SvImJ_G0002272.1 mouse_genomes_project 8 111417978 111419682 + TEC TEC MGP_129S1SvImJ_T0101361.1 MGP_129S1SvImJ_G0039428.1 mouse_genomes_project 8 3251222 3251366 - Gm24288 snoRNA snoRNA MGP_129S1SvImJ_T0089228.1 MGP_129S1SvImJ_G0033711.1 mouse_genomes_project 8 70799978 70807295 + MGP_129S1SvImJ_P0089228 Fkbp8 protein_coding protein_coding MGP_129S1SvImJ_T0089229.1 MGP_129S1SvImJ_G0033711.1 mouse_genomes_project 8 70800001 70807293 + MGP_129S1SvImJ_P0089229 Fkbp8 protein_coding protein_coding MGP_129S1SvImJ_T0089230.1 MGP_129S1SvImJ_G0033711.1 mouse_genomes_project 8 70800016 70804731 + Fkbp8 protein_coding retained_intron MGP_129S1SvImJ_T0089231.1 MGP_129S1SvImJ_G0033711.1 mouse_genomes_project 8 70800100 70807294 + MGP_129S1SvImJ_P0089231 Fkbp8 protein_coding protein_coding MGP_129S1SvImJ_T0089232.1 MGP_129S1SvImJ_G0033711.1 mouse_genomes_project 8 70800263 70802880 + Fkbp8 protein_coding retained_intron MGP_129S1SvImJ_T0089233.1 MGP_129S1SvImJ_G0033711.1 mouse_genomes_project 8 70801070 70801843 + MGP_129S1SvImJ_P0089233 Fkbp8 protein_coding protein_coding MGP_129S1SvImJ_T0089234.1 MGP_129S1SvImJ_G0033711.1 mouse_genomes_project 8 70803407 70806128 + Fkbp8 protein_coding retained_intron MGP_129S1SvImJ_T0089235.1 MGP_129S1SvImJ_G0033711.1 mouse_genomes_project 8 70804017 70806923 + Fkbp8 protein_coding retained_intron MGP_129S1SvImJ_T0089236.1 MGP_129S1SvImJ_G0033711.1 mouse_genomes_project 8 70804404 70806938 + Fkbp8 protein_coding retained_intron MGP_129S1SvImJ_T0089237.1 MGP_129S1SvImJ_G0033711.1 mouse_genomes_project 8 70804461 70806834 + Fkbp8 protein_coding retained_intron MGP_129S1SvImJ_T0089238.1 MGP_129S1SvImJ_G0033711.1 mouse_genomes_project 8 70806073 70807024 + MGP_129S1SvImJ_P0089238 Fkbp8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089250.1 MGP_129S1SvImJ_G0033720.1 mouse_genomes_project 8 70988303 70988846 - MGP_129S1SvImJ_P0089250 protein_coding protein_coding MGP_129S1SvImJ_T0018517.1 MGP_129S1SvImJ_G0015721.1 mouse_genomes_project 8 88386187 88392058 - Gm27208 processed_transcript lincRNA MGP_129S1SvImJ_T0018518.1 MGP_129S1SvImJ_G0015721.1 mouse_genomes_project 8 88391575 88392680 - Gm27208 processed_transcript TEC MGP_129S1SvImJ_T0090137.1 MGP_129S1SvImJ_G0034003.1 mouse_genomes_project 8 106364883 106380774 + MGP_129S1SvImJ_P0090137 Cklf protein_coding protein_coding MGP_129S1SvImJ_T0090138.1 MGP_129S1SvImJ_G0034003.1 mouse_genomes_project 8 106364912 106385888 + MGP_129S1SvImJ_P0090138 Cklf protein_coding protein_coding MGP_129S1SvImJ_T0088890.1 MGP_129S1SvImJ_G0033621.1 mouse_genomes_project 8 57032203 57037056 + MGP_129S1SvImJ_P0088890 Hand2 protein_coding protein_coding MGP_129S1SvImJ_T0088953.1 MGP_129S1SvImJ_G0033637.1 mouse_genomes_project 8 61876382 61914736 + MGP_129S1SvImJ_P0088953 Ddx60 protein_coding protein_coding MGP_129S1SvImJ_T0088954.1 MGP_129S1SvImJ_G0033637.1 mouse_genomes_project 8 61876384 61989480 + MGP_129S1SvImJ_P0088954 Ddx60 protein_coding protein_coding MGP_129S1SvImJ_T0088955.1 MGP_129S1SvImJ_G0033637.1 mouse_genomes_project 8 61876384 61989486 + MGP_129S1SvImJ_P0088955 Ddx60 protein_coding protein_coding MGP_129S1SvImJ_T0088956.1 MGP_129S1SvImJ_G0033637.1 mouse_genomes_project 8 61876384 61889525 + MGP_129S1SvImJ_P0088956 Ddx60 protein_coding protein_coding MGP_129S1SvImJ_T0088957.1 MGP_129S1SvImJ_G0033637.1 mouse_genomes_project 8 61935993 61940165 + Ddx60 protein_coding retained_intron MGP_129S1SvImJ_T0088958.1 MGP_129S1SvImJ_G0033637.1 mouse_genomes_project 8 61974526 61976886 + Ddx60 protein_coding retained_intron MGP_129S1SvImJ_T0088959.1 MGP_129S1SvImJ_G0033637.1 mouse_genomes_project 8 61978096 61984424 + Ddx60 protein_coding retained_intron MGP_129S1SvImJ_T0016006.1 MGP_129S1SvImJ_G0014095.1 mouse_genomes_project 8 86825554 86826619 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0089358.1 MGP_129S1SvImJ_G0033757.1 mouse_genomes_project 8 72008991 72020639 + MGP_129S1SvImJ_P0089358 Fam129c protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089359.1 MGP_129S1SvImJ_G0033757.1 mouse_genomes_project 8 72011329 72021009 + MGP_129S1SvImJ_P0089359 Fam129c protein_coding protein_coding MGP_129S1SvImJ_T0089360.1 MGP_129S1SvImJ_G0033757.1 mouse_genomes_project 8 72011463 72020997 + Fam129c protein_coding retained_intron MGP_129S1SvImJ_T0089361.1 MGP_129S1SvImJ_G0033757.1 mouse_genomes_project 8 72012905 72014812 + Fam129c protein_coding processed_transcript MGP_129S1SvImJ_T0089362.1 MGP_129S1SvImJ_G0033757.1 mouse_genomes_project 8 72013639 72015306 + Fam129c protein_coding retained_intron MGP_129S1SvImJ_T0089363.1 MGP_129S1SvImJ_G0033757.1 mouse_genomes_project 8 72015338 72016015 + Fam129c protein_coding retained_intron MGP_129S1SvImJ_T0089364.1 MGP_129S1SvImJ_G0033757.1 mouse_genomes_project 8 72015422 72020997 + Fam129c protein_coding retained_intron MGP_129S1SvImJ_T0089365.1 MGP_129S1SvImJ_G0033757.1 mouse_genomes_project 8 72017816 72020644 + MGP_129S1SvImJ_P0089365 Fam129c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089366.1 MGP_129S1SvImJ_G0033757.1 mouse_genomes_project 8 72018033 72021006 + MGP_129S1SvImJ_P0089366 Fam129c protein_coding protein_coding MGP_129S1SvImJ_T0089669.1 MGP_129S1SvImJ_G0033863.1 mouse_genomes_project 8 85281660 85420434 + Cacna1a protein_coding retained_intron MGP_129S1SvImJ_T0089670.1 MGP_129S1SvImJ_G0033863.1 mouse_genomes_project 8 85309538 85547674 + MGP_129S1SvImJ_P0089670 Cacna1a protein_coding protein_coding MGP_129S1SvImJ_T0089671.1 MGP_129S1SvImJ_G0033863.1 mouse_genomes_project 8 85309538 85547490 + MGP_129S1SvImJ_P0089671 Cacna1a protein_coding protein_coding MGP_129S1SvImJ_T0089672.1 MGP_129S1SvImJ_G0033863.1 mouse_genomes_project 8 85448347 85455273 + Cacna1a protein_coding processed_transcript MGP_129S1SvImJ_T0089673.1 MGP_129S1SvImJ_G0033863.1 mouse_genomes_project 8 85474480 85483117 + Cacna1a protein_coding retained_intron MGP_129S1SvImJ_T0089674.1 MGP_129S1SvImJ_G0033863.1 mouse_genomes_project 8 85505302 85515990 + Cacna1a protein_coding retained_intron MGP_129S1SvImJ_T0089675.1 MGP_129S1SvImJ_G0033863.1 mouse_genomes_project 8 85505315 85516952 + Cacna1a protein_coding retained_intron MGP_129S1SvImJ_T0089676.1 MGP_129S1SvImJ_G0033863.1 mouse_genomes_project 8 85505341 85539245 + Cacna1a protein_coding retained_intron MGP_129S1SvImJ_T0089677.1 MGP_129S1SvImJ_G0033863.1 mouse_genomes_project 8 85505844 85521770 + Cacna1a protein_coding processed_transcript MGP_129S1SvImJ_T0101369.1 MGP_129S1SvImJ_G0039436.1 mouse_genomes_project 8 16409670 16409773 + Gm22551 snoRNA snoRNA MGP_129S1SvImJ_T0090062.1 MGP_129S1SvImJ_G0033975.1 mouse_genomes_project 8 96367367 96389205 + MGP_129S1SvImJ_P0090062 Adgrg5 protein_coding protein_coding MGP_129S1SvImJ_T0090063.1 MGP_129S1SvImJ_G0033975.1 mouse_genomes_project 8 96367367 96380462 + MGP_129S1SvImJ_P0090063 Adgrg5 protein_coding protein_coding MGP_129S1SvImJ_T0090064.1 MGP_129S1SvImJ_G0033975.1 mouse_genomes_project 8 96367367 96389215 + MGP_129S1SvImJ_P0090064 Adgrg5 protein_coding protein_coding MGP_129S1SvImJ_T0090065.1 MGP_129S1SvImJ_G0033975.1 mouse_genomes_project 8 96367372 96389205 + MGP_129S1SvImJ_P0090065 Adgrg5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090066.1 MGP_129S1SvImJ_G0033975.1 mouse_genomes_project 8 96380112 96381030 + Adgrg5 protein_coding processed_transcript MGP_129S1SvImJ_T0005347.1 MGP_129S1SvImJ_G0004536.1 mouse_genomes_project 8 10134032 10139565 - Gm15350 antisense antisense MGP_129S1SvImJ_T0005348.1 MGP_129S1SvImJ_G0004536.1 mouse_genomes_project 8 10134032 10137617 - Gm15350 antisense antisense MGP_129S1SvImJ_T0011003.1 MGP_129S1SvImJ_G0009119.1 mouse_genomes_project 8 84869486 84869623 + Mir8111 miRNA miRNA MGP_129S1SvImJ_T0010975.1 MGP_129S1SvImJ_G0009091.1 mouse_genomes_project 8 17074471 17074561 - Gm27852 miRNA miRNA MGP_129S1SvImJ_T0090840.1 MGP_129S1SvImJ_G0034237.1 mouse_genomes_project 8 126346127 126386150 + MGP_129S1SvImJ_P0090840 Acsf3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089106.1 MGP_129S1SvImJ_G0033685.1 mouse_genomes_project 8 70260203 70287994 - MGP_129S1SvImJ_P0089106 Mau2 protein_coding protein_coding MGP_129S1SvImJ_T0089107.1 MGP_129S1SvImJ_G0033685.1 mouse_genomes_project 8 70260203 70288043 - MGP_129S1SvImJ_P0089107 Mau2 protein_coding protein_coding MGP_129S1SvImJ_T0015971.1 MGP_129S1SvImJ_G0014060.1 mouse_genomes_project 8 29603597 29604063 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015976.1 MGP_129S1SvImJ_G0014065.1 mouse_genomes_project 8 34669414 34669793 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100109.1 MGP_129S1SvImJ_G0038176.1 mouse_genomes_project 8 35060372 35060523 - Gm26150 snRNA snRNA MGP_129S1SvImJ_T0090072.1 MGP_129S1SvImJ_G0033980.1 mouse_genomes_project 8 96557257 96593715 - MGP_129S1SvImJ_P0090072 Kifc3 protein_coding protein_coding MGP_129S1SvImJ_T0090073.1 MGP_129S1SvImJ_G0033980.1 mouse_genomes_project 8 96557263 96593786 - MGP_129S1SvImJ_P0090073 Kifc3 protein_coding protein_coding MGP_129S1SvImJ_T0090244.1 MGP_129S1SvImJ_G0034044.1 mouse_genomes_project 8 107658200 107692534 - MGP_129S1SvImJ_P0090244 Kctd19 protein_coding protein_coding MGP_129S1SvImJ_T0090245.1 MGP_129S1SvImJ_G0034044.1 mouse_genomes_project 8 107658200 107692534 - MGP_129S1SvImJ_P0090245 Kctd19 protein_coding protein_coding MGP_129S1SvImJ_T0090246.1 MGP_129S1SvImJ_G0034044.1 mouse_genomes_project 8 107658335 107662042 - MGP_129S1SvImJ_P0090246 Kctd19 protein_coding protein_coding MGP_129S1SvImJ_T0090247.1 MGP_129S1SvImJ_G0034044.1 mouse_genomes_project 8 107670450 107692488 - MGP_129S1SvImJ_P0090247 Kctd19 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088322.1 MGP_129S1SvImJ_G0033437.1 mouse_genomes_project 8 19759329 19762241 - MGP_129S1SvImJ_P0088322 Defb15 protein_coding protein_coding MGP_129S1SvImJ_T0090169.1 MGP_129S1SvImJ_G0034016.1 mouse_genomes_project 8 106783057 106786313 - MGP_129S1SvImJ_P0090169 Rrad protein_coding protein_coding MGP_129S1SvImJ_T0090187.1 MGP_129S1SvImJ_G0034024.1 mouse_genomes_project 8 107200088 107212590 + MGP_129S1SvImJ_P0090187 Ces2h protein_coding protein_coding MGP_129S1SvImJ_T0015946.1 MGP_129S1SvImJ_G0014035.1 mouse_genomes_project 8 821508 821964 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0088307.1 MGP_129S1SvImJ_G0033423.1 mouse_genomes_project 8 18664096 18665935 - MGP_129S1SvImJ_P0088307 Gm15056 protein_coding protein_coding MGP_129S1SvImJ_T0088308.1 MGP_129S1SvImJ_G0033423.1 mouse_genomes_project 8 18664096 18665464 - MGP_129S1SvImJ_P0088308 Gm15056 protein_coding protein_coding MGP_129S1SvImJ_T0090939.1 MGP_129S1SvImJ_G0034265.1 mouse_genomes_project 8 127538183 127590496 - MGP_129S1SvImJ_P0090939 Nup133 protein_coding protein_coding MGP_129S1SvImJ_T0009138.1 MGP_129S1SvImJ_G0007352.1 mouse_genomes_project 8 88110974 88201889 + Gm27246 lincRNA lincRNA MGP_129S1SvImJ_T0088462.1 MGP_129S1SvImJ_G0033482.1 mouse_genomes_project 8 23629128 23650585 - MGP_129S1SvImJ_P0088462 Letm2 protein_coding protein_coding MGP_129S1SvImJ_T0088023.1 MGP_129S1SvImJ_G0033326.1 mouse_genomes_project 8 1194498 1203065 - MGP_129S1SvImJ_P0088023 Prr36 protein_coding protein_coding MGP_129S1SvImJ_T0088024.1 MGP_129S1SvImJ_G0033326.1 mouse_genomes_project 8 1200777 1202665 - MGP_129S1SvImJ_P0088024 Prr36 protein_coding protein_coding MGP_129S1SvImJ_T0088025.1 MGP_129S1SvImJ_G0033326.1 mouse_genomes_project 8 1201700 1202905 - MGP_129S1SvImJ_P0088025 Prr36 protein_coding protein_coding MGP_129S1SvImJ_T0088026.1 MGP_129S1SvImJ_G0033326.1 mouse_genomes_project 8 1202160 1203212 - MGP_129S1SvImJ_P0088026 Prr36 protein_coding protein_coding MGP_129S1SvImJ_T0015981.1 MGP_129S1SvImJ_G0014070.1 mouse_genomes_project 8 40790522 40794575 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015998.1 MGP_129S1SvImJ_G0014087.1 mouse_genomes_project 8 80813560 80814797 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0089747.1 MGP_129S1SvImJ_G0033878.1 mouse_genomes_project 8 85831720 85835090 + MGP_129S1SvImJ_P0089747 Klf1 protein_coding protein_coding MGP_129S1SvImJ_T0015961.1 MGP_129S1SvImJ_G0014050.1 mouse_genomes_project 8 17043427 17052784 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100137.1 MGP_129S1SvImJ_G0038204.1 mouse_genomes_project 8 109414727 109414837 - Gm22085 snRNA snRNA MGP_129S1SvImJ_T0102832.1 MGP_129S1SvImJ_G0040664.1 mouse_genomes_project 8 18612217 18613215 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0090808.1 MGP_129S1SvImJ_G0034228.1 mouse_genomes_project 8 126015802 126025923 + MGP_129S1SvImJ_P0090808 Ctu2 protein_coding protein_coding MGP_129S1SvImJ_T0090809.1 MGP_129S1SvImJ_G0034228.1 mouse_genomes_project 8 126015868 126026969 + MGP_129S1SvImJ_P0090809 Ctu2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090810.1 MGP_129S1SvImJ_G0034228.1 mouse_genomes_project 8 126015872 126024572 + Ctu2 protein_coding retained_intron MGP_129S1SvImJ_T0090811.1 MGP_129S1SvImJ_G0034228.1 mouse_genomes_project 8 126015872 126020926 + MGP_129S1SvImJ_P0090811 Ctu2 protein_coding protein_coding MGP_129S1SvImJ_T0090812.1 MGP_129S1SvImJ_G0034228.1 mouse_genomes_project 8 126015879 126022056 + MGP_129S1SvImJ_P0090812 Ctu2 protein_coding protein_coding MGP_129S1SvImJ_T0090813.1 MGP_129S1SvImJ_G0034228.1 mouse_genomes_project 8 126015902 126021661 + Ctu2 protein_coding retained_intron MGP_129S1SvImJ_T0090814.1 MGP_129S1SvImJ_G0034228.1 mouse_genomes_project 8 126019405 126020958 + Ctu2 protein_coding retained_intron MGP_129S1SvImJ_T0090815.1 MGP_129S1SvImJ_G0034228.1 mouse_genomes_project 8 126023752 126024571 + Ctu2 protein_coding retained_intron MGP_129S1SvImJ_T0090816.1 MGP_129S1SvImJ_G0034228.1 mouse_genomes_project 8 126023787 126024575 + MGP_129S1SvImJ_P0090816 Ctu2 protein_coding protein_coding MGP_129S1SvImJ_T0090649.1 MGP_129S1SvImJ_G0034193.1 mouse_genomes_project 8 123170694 123202060 - MGP_129S1SvImJ_P0090649 Cotl1 protein_coding protein_coding MGP_129S1SvImJ_T0090650.1 MGP_129S1SvImJ_G0034193.1 mouse_genomes_project 8 123170694 123202117 - MGP_129S1SvImJ_P0090650 Cotl1 protein_coding protein_coding MGP_129S1SvImJ_T0088041.1 MGP_129S1SvImJ_G0033331.1 mouse_genomes_project 8 1243042 1244670 - MGP_129S1SvImJ_P0088041 Ctxn1 protein_coding protein_coding MGP_129S1SvImJ_T0090370.1 MGP_129S1SvImJ_G0034097.1 mouse_genomes_project 8 109484034 109514500 - MGP_129S1SvImJ_P0090370 Terf2 protein_coding protein_coding MGP_129S1SvImJ_T0090371.1 MGP_129S1SvImJ_G0034097.1 mouse_genomes_project 8 109484036 109514145 - MGP_129S1SvImJ_P0090371 Terf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090372.1 MGP_129S1SvImJ_G0034097.1 mouse_genomes_project 8 109484036 109514500 - MGP_129S1SvImJ_P0090372 Terf2 protein_coding protein_coding MGP_129S1SvImJ_T0090373.1 MGP_129S1SvImJ_G0034097.1 mouse_genomes_project 8 109484562 109514469 - MGP_129S1SvImJ_P0090373 Terf2 protein_coding protein_coding MGP_129S1SvImJ_T0090374.1 MGP_129S1SvImJ_G0034097.1 mouse_genomes_project 8 109490151 109514502 - MGP_129S1SvImJ_P0090374 Terf2 protein_coding protein_coding MGP_129S1SvImJ_T0090375.1 MGP_129S1SvImJ_G0034097.1 mouse_genomes_project 8 109490953 109494510 - Terf2 protein_coding retained_intron MGP_129S1SvImJ_T0090376.1 MGP_129S1SvImJ_G0034097.1 mouse_genomes_project 8 109494062 109498052 - Terf2 protein_coding retained_intron MGP_129S1SvImJ_T0090377.1 MGP_129S1SvImJ_G0034097.1 mouse_genomes_project 8 109494071 109499828 - Terf2 protein_coding retained_intron MGP_129S1SvImJ_T0099015.1 MGP_129S1SvImJ_G0037088.1 mouse_genomes_project 8 126630806 126632945 + 2810013P06Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0018478.1 MGP_129S1SvImJ_G0015705.1 mouse_genomes_project 8 4906972 4912125 + Gm28262 processed_transcript lincRNA MGP_129S1SvImJ_T0018479.1 MGP_129S1SvImJ_G0015705.1 mouse_genomes_project 8 4912088 4917616 + Gm28262 processed_transcript TEC MGP_129S1SvImJ_T0088615.1 MGP_129S1SvImJ_G0033543.1 mouse_genomes_project 8 34869774 34905604 - MGP_129S1SvImJ_P0088615 Lonrf1 protein_coding protein_coding MGP_129S1SvImJ_T0098645.1 MGP_129S1SvImJ_G0036730.1 mouse_genomes_project 8 2313323 2313442 - n-R5s94 rRNA rRNA MGP_129S1SvImJ_T0090008.1 MGP_129S1SvImJ_G0033958.1 mouse_genomes_project 8 95623296 95729942 + MGP_129S1SvImJ_P0090008 Nup93 protein_coding protein_coding MGP_129S1SvImJ_T0090009.1 MGP_129S1SvImJ_G0033958.1 mouse_genomes_project 8 95638136 95730165 + MGP_129S1SvImJ_P0090009 Nup93 protein_coding protein_coding MGP_129S1SvImJ_T0089203.1 MGP_129S1SvImJ_G0033708.1 mouse_genomes_project 8 70772578 70775008 - 2810428I15Rik protein_coding retained_intron MGP_129S1SvImJ_T0089204.1 MGP_129S1SvImJ_G0033708.1 mouse_genomes_project 8 70772581 70774399 - 2810428I15Rik protein_coding retained_intron MGP_129S1SvImJ_T0089205.1 MGP_129S1SvImJ_G0033708.1 mouse_genomes_project 8 70772581 70774713 - 2810428I15Rik protein_coding processed_transcript MGP_129S1SvImJ_T0089206.1 MGP_129S1SvImJ_G0033708.1 mouse_genomes_project 8 70772581 70775039 - MGP_129S1SvImJ_P0089206 2810428I15Rik protein_coding protein_coding MGP_129S1SvImJ_T0089207.1 MGP_129S1SvImJ_G0033708.1 mouse_genomes_project 8 70772585 70775024 - MGP_129S1SvImJ_P0089207 2810428I15Rik protein_coding protein_coding MGP_129S1SvImJ_T0089208.1 MGP_129S1SvImJ_G0033708.1 mouse_genomes_project 8 70772684 70774395 - 2810428I15Rik protein_coding retained_intron MGP_129S1SvImJ_T0089209.1 MGP_129S1SvImJ_G0033708.1 mouse_genomes_project 8 70773531 70774986 - 2810428I15Rik protein_coding retained_intron MGP_129S1SvImJ_T0089210.1 MGP_129S1SvImJ_G0033708.1 mouse_genomes_project 8 70774137 70775000 - 2810428I15Rik protein_coding retained_intron MGP_129S1SvImJ_T0088979.1 MGP_129S1SvImJ_G0033645.1 mouse_genomes_project 8 64973430 64997345 + MGP_129S1SvImJ_P0088979 Tmem192 protein_coding protein_coding MGP_129S1SvImJ_T0088980.1 MGP_129S1SvImJ_G0033645.1 mouse_genomes_project 8 64973430 64997345 + MGP_129S1SvImJ_P0088980 Tmem192 protein_coding protein_coding MGP_129S1SvImJ_T0088534.1 MGP_129S1SvImJ_G0033510.1 mouse_genomes_project 8 25666367 25723338 + MGP_129S1SvImJ_P0088534 protein_coding protein_coding MGP_129S1SvImJ_T0090150.1 MGP_129S1SvImJ_G0034011.1 mouse_genomes_project 8 106585478 106648590 - MGP_129S1SvImJ_P0090150 Terb1 protein_coding protein_coding MGP_129S1SvImJ_T0090151.1 MGP_129S1SvImJ_G0034011.1 mouse_genomes_project 8 106585796 106648586 - MGP_129S1SvImJ_P0090151 Terb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090152.1 MGP_129S1SvImJ_G0034011.1 mouse_genomes_project 8 106585797 106648585 - MGP_129S1SvImJ_P0090152 Terb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090153.1 MGP_129S1SvImJ_G0034011.1 mouse_genomes_project 8 106586520 106648613 - MGP_129S1SvImJ_P0090153 Terb1 protein_coding protein_coding MGP_129S1SvImJ_T0009177.1 MGP_129S1SvImJ_G0007374.1 mouse_genomes_project 8 104583698 104584781 + lincRNA lincRNA MGP_129S1SvImJ_T0088576.1 MGP_129S1SvImJ_G0033529.1 mouse_genomes_project 8 32249282 32263510 - MGP_129S1SvImJ_P0088576 Rbpms protein_coding unknown_likely_coding MGP_129S1SvImJ_T0088577.1 MGP_129S1SvImJ_G0033529.1 mouse_genomes_project 8 32249286 32412104 - MGP_129S1SvImJ_P0088577 Rbpms protein_coding protein_coding MGP_129S1SvImJ_T0088578.1 MGP_129S1SvImJ_G0033529.1 mouse_genomes_project 8 32249287 32412092 - MGP_129S1SvImJ_P0088578 Rbpms protein_coding protein_coding MGP_129S1SvImJ_T0088579.1 MGP_129S1SvImJ_G0033529.1 mouse_genomes_project 8 32249290 32412057 - MGP_129S1SvImJ_P0088579 Rbpms protein_coding protein_coding MGP_129S1SvImJ_T0088580.1 MGP_129S1SvImJ_G0033529.1 mouse_genomes_project 8 32250426 32412067 - MGP_129S1SvImJ_P0088580 Rbpms protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088581.1 MGP_129S1SvImJ_G0033529.1 mouse_genomes_project 8 32250697 32314271 - MGP_129S1SvImJ_P0088581 Rbpms protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088582.1 MGP_129S1SvImJ_G0033529.1 mouse_genomes_project 8 32250706 32273403 - MGP_129S1SvImJ_P0088582 Rbpms protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088583.1 MGP_129S1SvImJ_G0033529.1 mouse_genomes_project 8 32250709 32273366 - MGP_129S1SvImJ_P0088583 Rbpms protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088584.1 MGP_129S1SvImJ_G0033529.1 mouse_genomes_project 8 32250711 32326335 - Rbpms protein_coding processed_transcript MGP_129S1SvImJ_T0088585.1 MGP_129S1SvImJ_G0033529.1 mouse_genomes_project 8 32250717 32263841 - Rbpms protein_coding retained_intron MGP_129S1SvImJ_T0088586.1 MGP_129S1SvImJ_G0033529.1 mouse_genomes_project 8 32270508 32412056 - MGP_129S1SvImJ_P0088586 Rbpms protein_coding protein_coding MGP_129S1SvImJ_T0088587.1 MGP_129S1SvImJ_G0033529.1 mouse_genomes_project 8 32273308 32313029 - MGP_129S1SvImJ_P0088587 Rbpms protein_coding protein_coding MGP_129S1SvImJ_T0088588.1 MGP_129S1SvImJ_G0033529.1 mouse_genomes_project 8 32273330 32364658 - MGP_129S1SvImJ_P0088588 Rbpms protein_coding protein_coding MGP_129S1SvImJ_T0088589.1 MGP_129S1SvImJ_G0033529.1 mouse_genomes_project 8 32337840 32366660 - Rbpms protein_coding processed_transcript MGP_129S1SvImJ_T0090214.1 MGP_129S1SvImJ_G0034032.1 mouse_genomes_project 8 107529964 107534643 + MGP_129S1SvImJ_P0090214 Fbxl8 protein_coding protein_coding MGP_129S1SvImJ_T0090215.1 MGP_129S1SvImJ_G0034032.1 mouse_genomes_project 8 107529998 107534487 + MGP_129S1SvImJ_P0090215 Fbxl8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089367.1 MGP_129S1SvImJ_G0033758.1 mouse_genomes_project 8 72023886 72038207 + MGP_129S1SvImJ_P0089367 Colgalt1 protein_coding protein_coding MGP_129S1SvImJ_T0088831.1 MGP_129S1SvImJ_G0033599.1 mouse_genomes_project 8 46858217 46859880 + MGP_129S1SvImJ_P0088831 protein_coding protein_coding MGP_129S1SvImJ_T0088077.1 MGP_129S1SvImJ_G0033342.1 mouse_genomes_project 8 5734758 5737682 + MGP_129S1SvImJ_P0088077 protein_coding protein_coding MGP_129S1SvImJ_T0009144.1 MGP_129S1SvImJ_G0007357.1 mouse_genomes_project 8 88470111 88473434 + Gm19872 lincRNA lincRNA MGP_129S1SvImJ_T0015978.1 MGP_129S1SvImJ_G0014067.1 mouse_genomes_project 8 36521344 36522360 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101379.1 MGP_129S1SvImJ_G0039446.1 mouse_genomes_project 8 41446870 41446932 - Gm23531 snoRNA snoRNA MGP_129S1SvImJ_T0088600.1 MGP_129S1SvImJ_G0033531.1 mouse_genomes_project 8 32615397 32626547 + MGP_129S1SvImJ_P0088600 Mboat4 protein_coding protein_coding MGP_129S1SvImJ_T0088485.1 MGP_129S1SvImJ_G0033487.1 mouse_genomes_project 8 23832420 23854819 - MGP_129S1SvImJ_P0088485 Bag4 protein_coding protein_coding MGP_129S1SvImJ_T0100128.1 MGP_129S1SvImJ_G0038195.1 mouse_genomes_project 8 82934519 82934582 - Gm25267 snRNA snRNA MGP_129S1SvImJ_T0088837.1 MGP_129S1SvImJ_G0033605.1 mouse_genomes_project 8 47335529 47369956 + MGP_129S1SvImJ_P0088837 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088838.1 MGP_129S1SvImJ_G0033605.1 mouse_genomes_project 8 47335532 47366010 + protein_coding retained_intron MGP_129S1SvImJ_T0088839.1 MGP_129S1SvImJ_G0033605.1 mouse_genomes_project 8 47335556 47366916 + protein_coding processed_transcript MGP_129S1SvImJ_T0088840.1 MGP_129S1SvImJ_G0033605.1 mouse_genomes_project 8 47335578 47381510 + MGP_129S1SvImJ_P0088840 protein_coding protein_coding MGP_129S1SvImJ_T0088841.1 MGP_129S1SvImJ_G0033605.1 mouse_genomes_project 8 47335630 47368748 + MGP_129S1SvImJ_P0088841 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0010966.1 MGP_129S1SvImJ_G0009082.1 mouse_genomes_project 8 8865936 8865979 - Mir7238 miRNA miRNA MGP_129S1SvImJ_T0098402.1 MGP_129S1SvImJ_G0036487.1 mouse_genomes_project 8 127496538 127497541 + pseudogene pseudogene MGP_129S1SvImJ_T0088759.1 MGP_129S1SvImJ_G0033582.1 mouse_genomes_project 8 45081207 45084173 - MGP_129S1SvImJ_P0088759 Ankrd37 protein_coding protein_coding MGP_129S1SvImJ_T0088760.1 MGP_129S1SvImJ_G0033582.1 mouse_genomes_project 8 45081216 45084173 - Ankrd37 protein_coding processed_transcript MGP_129S1SvImJ_T0088761.1 MGP_129S1SvImJ_G0033582.1 mouse_genomes_project 8 45081219 45083872 - Ankrd37 protein_coding retained_intron MGP_129S1SvImJ_T0088762.1 MGP_129S1SvImJ_G0033582.1 mouse_genomes_project 8 45081270 45082174 - Ankrd37 protein_coding processed_transcript MGP_129S1SvImJ_T0088763.1 MGP_129S1SvImJ_G0033582.1 mouse_genomes_project 8 45082437 45084155 - Ankrd37 protein_coding retained_intron MGP_129S1SvImJ_T0089626.1 MGP_129S1SvImJ_G0033845.1 mouse_genomes_project 8 84862060 84864061 + MGP_129S1SvImJ_P0089626 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089424.1 MGP_129S1SvImJ_G0033773.1 mouse_genomes_project 8 72641811 72668224 + MGP_129S1SvImJ_P0089424 Rab8a protein_coding protein_coding MGP_129S1SvImJ_T0089425.1 MGP_129S1SvImJ_G0033773.1 mouse_genomes_project 8 72641924 72658346 + Rab8a protein_coding processed_transcript MGP_129S1SvImJ_T0089426.1 MGP_129S1SvImJ_G0033773.1 mouse_genomes_project 8 72641970 72658540 + Rab8a protein_coding retained_intron MGP_129S1SvImJ_T0010969.1 MGP_129S1SvImJ_G0009085.1 mouse_genomes_project 8 10256453 10256583 + Gm38671 miRNA miRNA MGP_129S1SvImJ_T0088428.1 MGP_129S1SvImJ_G0033475.1 mouse_genomes_project 8 22826843 22947184 - MGP_129S1SvImJ_P0088428 Adam32 protein_coding protein_coding MGP_129S1SvImJ_T0088429.1 MGP_129S1SvImJ_G0033475.1 mouse_genomes_project 8 22826846 22850778 - Adam32 protein_coding retained_intron MGP_129S1SvImJ_T0088430.1 MGP_129S1SvImJ_G0033475.1 mouse_genomes_project 8 22826846 22858473 - MGP_129S1SvImJ_P0088430 Adam32 protein_coding protein_coding MGP_129S1SvImJ_T0088431.1 MGP_129S1SvImJ_G0033475.1 mouse_genomes_project 8 22826849 22947175 - MGP_129S1SvImJ_P0088431 Adam32 protein_coding protein_coding MGP_129S1SvImJ_T0088432.1 MGP_129S1SvImJ_G0033475.1 mouse_genomes_project 8 22826849 22873587 - MGP_129S1SvImJ_P0088432 Adam32 protein_coding protein_coding MGP_129S1SvImJ_T0088433.1 MGP_129S1SvImJ_G0033475.1 mouse_genomes_project 8 22826908 22849652 - MGP_129S1SvImJ_P0088433 Adam32 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088434.1 MGP_129S1SvImJ_G0033475.1 mouse_genomes_project 8 22909453 22947161 - MGP_129S1SvImJ_P0088434 Adam32 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088435.1 MGP_129S1SvImJ_G0033475.1 mouse_genomes_project 8 22917652 22947184 - Adam32 protein_coding retained_intron MGP_129S1SvImJ_T0088702.1 MGP_129S1SvImJ_G0033569.1 mouse_genomes_project 8 42607560 42663271 - MGP_129S1SvImJ_P0088702 protein_coding protein_coding MGP_129S1SvImJ_T0015991.1 MGP_129S1SvImJ_G0014080.1 mouse_genomes_project 8 72922396 72922799 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009167.1 MGP_129S1SvImJ_G0007368.1 mouse_genomes_project 8 93627947 93630662 - Gm21817 lincRNA lincRNA MGP_129S1SvImJ_T0088713.1 MGP_129S1SvImJ_G0033573.1 mouse_genomes_project 8 44299564 44325891 - MGP_129S1SvImJ_P0088713 protein_coding protein_coding MGP_129S1SvImJ_T0088110.1 MGP_129S1SvImJ_G0033359.1 mouse_genomes_project 8 8975674 9077149 + MGP_129S1SvImJ_P0088110 Arhgef7 protein_coding protein_coding MGP_129S1SvImJ_T0088111.1 MGP_129S1SvImJ_G0033359.1 mouse_genomes_project 8 8975821 9078807 + MGP_129S1SvImJ_P0088111 Arhgef7 protein_coding protein_coding MGP_129S1SvImJ_T0088112.1 MGP_129S1SvImJ_G0033359.1 mouse_genomes_project 8 9034903 9089307 + MGP_129S1SvImJ_P0088112 Arhgef7 protein_coding protein_coding MGP_129S1SvImJ_T0088113.1 MGP_129S1SvImJ_G0033359.1 mouse_genomes_project 8 9066449 9070433 + Arhgef7 protein_coding processed_transcript MGP_129S1SvImJ_T0088114.1 MGP_129S1SvImJ_G0033359.1 mouse_genomes_project 8 9084325 9086388 + Arhgef7 protein_coding processed_transcript MGP_129S1SvImJ_T0090341.1 MGP_129S1SvImJ_G0034085.1 mouse_genomes_project 8 108956539 109027659 + MGP_129S1SvImJ_P0090341 Cdh1 protein_coding protein_coding MGP_129S1SvImJ_T0090342.1 MGP_129S1SvImJ_G0034085.1 mouse_genomes_project 8 108956567 109026775 + MGP_129S1SvImJ_P0090342 Cdh1 protein_coding protein_coding MGP_129S1SvImJ_T0090343.1 MGP_129S1SvImJ_G0034085.1 mouse_genomes_project 8 108957331 109010107 + Cdh1 protein_coding processed_transcript MGP_129S1SvImJ_T0011049.1 MGP_129S1SvImJ_G0009165.1 mouse_genomes_project 8 126698855 126698924 + Mir7079 miRNA miRNA MGP_129S1SvImJ_T0088245.1 MGP_129S1SvImJ_G0033397.1 mouse_genomes_project 8 12301018 12315811 + MGP_129S1SvImJ_P0088245 Cln8 protein_coding protein_coding MGP_129S1SvImJ_T0088246.1 MGP_129S1SvImJ_G0033397.1 mouse_genomes_project 8 12309137 12316154 + MGP_129S1SvImJ_P0088246 Cln8 protein_coding protein_coding MGP_129S1SvImJ_T0088247.1 MGP_129S1SvImJ_G0033397.1 mouse_genomes_project 8 12309203 12322811 + MGP_129S1SvImJ_P0088247 Cln8 protein_coding protein_coding MGP_129S1SvImJ_T0088248.1 MGP_129S1SvImJ_G0033397.1 mouse_genomes_project 8 12310096 12315881 + MGP_129S1SvImJ_P0088248 Cln8 protein_coding protein_coding MGP_129S1SvImJ_T0088249.1 MGP_129S1SvImJ_G0033397.1 mouse_genomes_project 8 12310451 12316014 + MGP_129S1SvImJ_P0088249 Cln8 protein_coding protein_coding MGP_129S1SvImJ_T0015950.1 MGP_129S1SvImJ_G0014039.1 mouse_genomes_project 8 2119398 2119886 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005358.1 MGP_129S1SvImJ_G0004543.1 mouse_genomes_project 8 13600294 13608633 + antisense antisense MGP_129S1SvImJ_T0090201.1 MGP_129S1SvImJ_G0034029.1 mouse_genomes_project 8 107484076 107517700 + MGP_129S1SvImJ_P0090201 D230025D16Rik protein_coding protein_coding MGP_129S1SvImJ_T0090202.1 MGP_129S1SvImJ_G0034029.1 mouse_genomes_project 8 107484137 107515772 + D230025D16Rik protein_coding retained_intron MGP_129S1SvImJ_T0090203.1 MGP_129S1SvImJ_G0034029.1 mouse_genomes_project 8 107484137 107517403 + MGP_129S1SvImJ_P0090203 D230025D16Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090204.1 MGP_129S1SvImJ_G0034029.1 mouse_genomes_project 8 107484198 107517700 + MGP_129S1SvImJ_P0090204 D230025D16Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090205.1 MGP_129S1SvImJ_G0034029.1 mouse_genomes_project 8 107489883 107501301 + MGP_129S1SvImJ_P0090205 D230025D16Rik protein_coding protein_coding MGP_129S1SvImJ_T0090206.1 MGP_129S1SvImJ_G0034029.1 mouse_genomes_project 8 107511139 107516412 + D230025D16Rik protein_coding retained_intron MGP_129S1SvImJ_T0089781.1 MGP_129S1SvImJ_G0033886.1 mouse_genomes_project 8 85951631 85960434 - MGP_129S1SvImJ_P0089781 Best2 protein_coding protein_coding MGP_129S1SvImJ_T0090356.1 MGP_129S1SvImJ_G0034091.1 mouse_genomes_project 8 109329803 109419417 + MGP_129S1SvImJ_P0090356 Sntb2 protein_coding protein_coding MGP_129S1SvImJ_T0089439.1 MGP_129S1SvImJ_G0033781.1 mouse_genomes_project 8 72915486 72939619 - MGP_129S1SvImJ_P0089439 Calr3 protein_coding protein_coding MGP_129S1SvImJ_T0089440.1 MGP_129S1SvImJ_G0033781.1 mouse_genomes_project 8 72915493 72929112 - MGP_129S1SvImJ_P0089440 Calr3 protein_coding protein_coding MGP_129S1SvImJ_T0015949.1 MGP_129S1SvImJ_G0014038.1 mouse_genomes_project 8 1862676 1863190 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010971.1 MGP_129S1SvImJ_G0009087.1 mouse_genomes_project 8 10515533 10515601 - Mir1968 miRNA miRNA MGP_129S1SvImJ_T0088487.1 MGP_129S1SvImJ_G0033489.1 mouse_genomes_project 8 23880303 23886547 + MGP_129S1SvImJ_P0088487 Star protein_coding protein_coding MGP_129S1SvImJ_T0101377.1 MGP_129S1SvImJ_G0039444.1 mouse_genomes_project 8 37783515 37783648 - Gm23128 snoRNA snoRNA MGP_129S1SvImJ_T0090272.1 MGP_129S1SvImJ_G0034054.1 mouse_genomes_project 8 108000937 108003860 - MGP_129S1SvImJ_P0090272 Acd protein_coding protein_coding MGP_129S1SvImJ_T0090663.1 MGP_129S1SvImJ_G0034196.1 mouse_genomes_project 8 123360866 123427945 + MGP_129S1SvImJ_P0090663 Crispld2 protein_coding protein_coding MGP_129S1SvImJ_T0090664.1 MGP_129S1SvImJ_G0034196.1 mouse_genomes_project 8 123360936 123426728 + MGP_129S1SvImJ_P0090664 Crispld2 protein_coding protein_coding MGP_129S1SvImJ_T0090665.1 MGP_129S1SvImJ_G0034196.1 mouse_genomes_project 8 123377138 123426728 + MGP_129S1SvImJ_P0090665 Crispld2 protein_coding protein_coding MGP_129S1SvImJ_T0090666.1 MGP_129S1SvImJ_G0034196.1 mouse_genomes_project 8 123388356 123390846 + Crispld2 protein_coding processed_transcript MGP_129S1SvImJ_T0090667.1 MGP_129S1SvImJ_G0034196.1 mouse_genomes_project 8 123405951 123425623 + Crispld2 protein_coding retained_intron MGP_129S1SvImJ_T0089550.1 MGP_129S1SvImJ_G0033822.1 mouse_genomes_project 8 82097769 82511218 + MGP_129S1SvImJ_P0089550 Inpp4b protein_coding protein_coding MGP_129S1SvImJ_T0089551.1 MGP_129S1SvImJ_G0033822.1 mouse_genomes_project 8 82097771 82840220 + MGP_129S1SvImJ_P0089551 Inpp4b protein_coding protein_coding MGP_129S1SvImJ_T0089552.1 MGP_129S1SvImJ_G0033822.1 mouse_genomes_project 8 82097775 82893885 + MGP_129S1SvImJ_P0089552 Inpp4b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089553.1 MGP_129S1SvImJ_G0033822.1 mouse_genomes_project 8 82097775 82896137 + MGP_129S1SvImJ_P0089553 Inpp4b protein_coding protein_coding MGP_129S1SvImJ_T0089554.1 MGP_129S1SvImJ_G0033822.1 mouse_genomes_project 8 82097775 82893653 + MGP_129S1SvImJ_P0089554 Inpp4b protein_coding protein_coding MGP_129S1SvImJ_T0089555.1 MGP_129S1SvImJ_G0033822.1 mouse_genomes_project 8 82486109 82893658 + MGP_129S1SvImJ_P0089555 Inpp4b protein_coding protein_coding MGP_129S1SvImJ_T0089556.1 MGP_129S1SvImJ_G0033822.1 mouse_genomes_project 8 82534131 82580713 + Inpp4b protein_coding processed_transcript MGP_129S1SvImJ_T0089557.1 MGP_129S1SvImJ_G0033822.1 mouse_genomes_project 8 82537062 82654945 + Inpp4b protein_coding processed_transcript MGP_129S1SvImJ_T0089558.1 MGP_129S1SvImJ_G0033822.1 mouse_genomes_project 8 82540683 82840220 + MGP_129S1SvImJ_P0089558 Inpp4b protein_coding protein_coding MGP_129S1SvImJ_T0089559.1 MGP_129S1SvImJ_G0033822.1 mouse_genomes_project 8 82612803 82724099 + Inpp4b protein_coding processed_transcript MGP_129S1SvImJ_T0089560.1 MGP_129S1SvImJ_G0033822.1 mouse_genomes_project 8 82625704 82893667 + MGP_129S1SvImJ_P0089560 Inpp4b protein_coding protein_coding MGP_129S1SvImJ_T0089561.1 MGP_129S1SvImJ_G0033822.1 mouse_genomes_project 8 82665478 82677625 + Inpp4b protein_coding processed_transcript MGP_129S1SvImJ_T0089068.1 MGP_129S1SvImJ_G0033672.1 mouse_genomes_project 8 69913400 69917797 - MGP_129S1SvImJ_P0089068 Zfp869 protein_coding protein_coding MGP_129S1SvImJ_T0010972.1 MGP_129S1SvImJ_G0009088.1 mouse_genomes_project 8 11253371 11253465 + miRNA miRNA MGP_129S1SvImJ_T0100146.1 MGP_129S1SvImJ_G0038213.1 mouse_genomes_project 8 126066151 126066258 - Gm26497 snRNA snRNA MGP_129S1SvImJ_T0090680.1 MGP_129S1SvImJ_G0034199.1 mouse_genomes_project 8 123559296 123571812 - MGP_129S1SvImJ_P0090680 Fam92b protein_coding protein_coding MGP_129S1SvImJ_T0090681.1 MGP_129S1SvImJ_G0034199.1 mouse_genomes_project 8 123560285 123571709 - Fam92b protein_coding retained_intron MGP_129S1SvImJ_T0090682.1 MGP_129S1SvImJ_G0034199.1 mouse_genomes_project 8 123564639 123571773 - MGP_129S1SvImJ_P0090682 Fam92b protein_coding protein_coding MGP_129S1SvImJ_T0090683.1 MGP_129S1SvImJ_G0034199.1 mouse_genomes_project 8 123569062 123571793 - Fam92b protein_coding retained_intron MGP_129S1SvImJ_T0090484.1 MGP_129S1SvImJ_G0034134.1 mouse_genomes_project 8 113752542 113756349 + MGP_129S1SvImJ_P0090484 Aars protein_coding protein_coding MGP_129S1SvImJ_T0090485.1 MGP_129S1SvImJ_G0034134.1 mouse_genomes_project 8 113753277 113764510 + Aars protein_coding retained_intron MGP_129S1SvImJ_T0090486.1 MGP_129S1SvImJ_G0034134.1 mouse_genomes_project 8 113753300 113777050 + MGP_129S1SvImJ_P0090486 Aars protein_coding protein_coding MGP_129S1SvImJ_T0090487.1 MGP_129S1SvImJ_G0034134.1 mouse_genomes_project 8 113753314 113766129 + Aars protein_coding retained_intron MGP_129S1SvImJ_T0090488.1 MGP_129S1SvImJ_G0034134.1 mouse_genomes_project 8 113761117 113762201 + Aars protein_coding retained_intron MGP_129S1SvImJ_T0090489.1 MGP_129S1SvImJ_G0034134.1 mouse_genomes_project 8 113762470 113764508 + Aars protein_coding retained_intron MGP_129S1SvImJ_T0090490.1 MGP_129S1SvImJ_G0034134.1 mouse_genomes_project 8 113767297 113769397 + Aars protein_coding retained_intron MGP_129S1SvImJ_T0090434.1 MGP_129S1SvImJ_G0034116.1 mouse_genomes_project 8 112567368 112583417 - MGP_129S1SvImJ_P0090434 Marveld3 protein_coding protein_coding MGP_129S1SvImJ_T0090435.1 MGP_129S1SvImJ_G0034116.1 mouse_genomes_project 8 112572795 112583452 - MGP_129S1SvImJ_P0090435 Marveld3 protein_coding protein_coding MGP_129S1SvImJ_T0090436.1 MGP_129S1SvImJ_G0034116.1 mouse_genomes_project 8 112580879 112583302 - Marveld3 protein_coding retained_intron MGP_129S1SvImJ_T0089399.1 MGP_129S1SvImJ_G0033766.1 mouse_genomes_project 8 72355120 72393928 + MGP_129S1SvImJ_P0089399 Zfp617 protein_coding protein_coding MGP_129S1SvImJ_T0089402.1 MGP_129S1SvImJ_G0033766.1 mouse_genomes_project 8 72384344 72394455 + MGP_129S1SvImJ_P0089402 Zfp617 protein_coding protein_coding MGP_129S1SvImJ_T0088716.1 MGP_129S1SvImJ_G0033575.1 mouse_genomes_project 8 44377421 44399792 - MGP_129S1SvImJ_P0088716 Fam149a protein_coding protein_coding MGP_129S1SvImJ_T0088717.1 MGP_129S1SvImJ_G0033575.1 mouse_genomes_project 8 44377429 44426147 - MGP_129S1SvImJ_P0088717 Fam149a protein_coding protein_coding MGP_129S1SvImJ_T0088718.1 MGP_129S1SvImJ_G0033575.1 mouse_genomes_project 8 44379463 44399689 - MGP_129S1SvImJ_P0088718 Fam149a protein_coding protein_coding MGP_129S1SvImJ_T0089636.1 MGP_129S1SvImJ_G0033848.1 mouse_genomes_project 8 84884754 84893960 + Palm3 protein_coding retained_intron MGP_129S1SvImJ_T0089637.1 MGP_129S1SvImJ_G0033848.1 mouse_genomes_project 8 84884754 84895067 + MGP_129S1SvImJ_P0089637 Palm3 protein_coding protein_coding MGP_129S1SvImJ_T0089638.1 MGP_129S1SvImJ_G0033848.1 mouse_genomes_project 8 84890862 84891837 + Palm3 protein_coding retained_intron MGP_129S1SvImJ_T0089742.1 MGP_129S1SvImJ_G0033877.1 mouse_genomes_project 8 85813631 85821455 - MGP_129S1SvImJ_P0089742 Gcdh protein_coding protein_coding MGP_129S1SvImJ_T0089743.1 MGP_129S1SvImJ_G0033877.1 mouse_genomes_project 8 85818507 85821059 - Gcdh protein_coding retained_intron MGP_129S1SvImJ_T0089744.1 MGP_129S1SvImJ_G0033877.1 mouse_genomes_project 8 85818706 85820441 - Gcdh protein_coding retained_intron MGP_129S1SvImJ_T0089745.1 MGP_129S1SvImJ_G0033877.1 mouse_genomes_project 8 85820425 85821249 - Gcdh protein_coding retained_intron MGP_129S1SvImJ_T0089746.1 MGP_129S1SvImJ_G0033877.1 mouse_genomes_project 8 85820868 85821695 - MGP_129S1SvImJ_P0089746 Gcdh protein_coding protein_coding MGP_129S1SvImJ_T0101406.1 MGP_129S1SvImJ_G0039473.1 mouse_genomes_project 8 92276859 92276991 - Gm22428 snoRNA snoRNA MGP_129S1SvImJ_T0089652.1 MGP_129S1SvImJ_G0033857.1 mouse_genomes_project 8 85020453 85033371 + MGP_129S1SvImJ_P0089652 4930432K21Rik protein_coding protein_coding MGP_129S1SvImJ_T0089653.1 MGP_129S1SvImJ_G0033857.1 mouse_genomes_project 8 85020581 85047239 + MGP_129S1SvImJ_P0089653 4930432K21Rik protein_coding protein_coding MGP_129S1SvImJ_T0089654.1 MGP_129S1SvImJ_G0033857.1 mouse_genomes_project 8 85020674 85047238 + MGP_129S1SvImJ_P0089654 4930432K21Rik protein_coding protein_coding MGP_129S1SvImJ_T0090598.1 MGP_129S1SvImJ_G0034171.1 mouse_genomes_project 8 120227386 120270084 + MGP_129S1SvImJ_P0090598 Bco1 protein_coding protein_coding MGP_129S1SvImJ_T0090599.1 MGP_129S1SvImJ_G0034171.1 mouse_genomes_project 8 120227397 120267585 + MGP_129S1SvImJ_P0090599 Bco1 protein_coding protein_coding MGP_129S1SvImJ_T0090600.1 MGP_129S1SvImJ_G0034171.1 mouse_genomes_project 8 120227530 120269683 + MGP_129S1SvImJ_P0090600 Bco1 protein_coding protein_coding MGP_129S1SvImJ_T0088810.1 MGP_129S1SvImJ_G0033593.1 mouse_genomes_project 8 46140568 46183368 + Enpp6 protein_coding retained_intron MGP_129S1SvImJ_T0088811.1 MGP_129S1SvImJ_G0033593.1 mouse_genomes_project 8 46140570 46241953 + Enpp6 protein_coding retained_intron MGP_129S1SvImJ_T0088812.1 MGP_129S1SvImJ_G0033593.1 mouse_genomes_project 8 46140570 46241953 + MGP_129S1SvImJ_P0088812 Enpp6 protein_coding protein_coding MGP_129S1SvImJ_T0088813.1 MGP_129S1SvImJ_G0033593.1 mouse_genomes_project 8 46140597 46235181 + MGP_129S1SvImJ_P0088813 Enpp6 protein_coding protein_coding MGP_129S1SvImJ_T0088814.1 MGP_129S1SvImJ_G0033593.1 mouse_genomes_project 8 46224527 46235867 + MGP_129S1SvImJ_P0088814 Enpp6 protein_coding protein_coding MGP_129S1SvImJ_T0087933.1 MGP_129S1SvImJ_G0033301.1 mouse_genomes_project 8 255039 360107 + MGP_129S1SvImJ_P0087933 Arhgef18 protein_coding protein_coding MGP_129S1SvImJ_T0087934.1 MGP_129S1SvImJ_G0033301.1 mouse_genomes_project 8 293051 354752 + Arhgef18 protein_coding retained_intron MGP_129S1SvImJ_T0087935.1 MGP_129S1SvImJ_G0033301.1 mouse_genomes_project 8 293118 329433 + Arhgef18 protein_coding processed_transcript MGP_129S1SvImJ_T0087936.1 MGP_129S1SvImJ_G0033301.1 mouse_genomes_project 8 293118 329801 + MGP_129S1SvImJ_P0087936 Arhgef18 protein_coding protein_coding MGP_129S1SvImJ_T0087937.1 MGP_129S1SvImJ_G0033301.1 mouse_genomes_project 8 337988 362199 + Arhgef18 protein_coding retained_intron MGP_129S1SvImJ_T0087938.1 MGP_129S1SvImJ_G0033301.1 mouse_genomes_project 8 354869 359840 + Arhgef18 protein_coding retained_intron MGP_129S1SvImJ_T0009101.1 MGP_129S1SvImJ_G0007318.1 mouse_genomes_project 8 32735974 32745324 + Gm29243 lincRNA lincRNA MGP_129S1SvImJ_T0089718.1 MGP_129S1SvImJ_G0033870.1 mouse_genomes_project 8 85731999 85741414 - MGP_129S1SvImJ_P0089718 Dand5 protein_coding protein_coding MGP_129S1SvImJ_T0090954.1 MGP_129S1SvImJ_G0034271.1 mouse_genomes_project 8 128209581 128240812 + MGP_129S1SvImJ_P0090954 Cog2 protein_coding protein_coding MGP_129S1SvImJ_T0090955.1 MGP_129S1SvImJ_G0034271.1 mouse_genomes_project 8 128209618 128218746 + MGP_129S1SvImJ_P0090955 Cog2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090956.1 MGP_129S1SvImJ_G0034271.1 mouse_genomes_project 8 128209619 128234589 + Cog2 protein_coding retained_intron MGP_129S1SvImJ_T0090957.1 MGP_129S1SvImJ_G0034271.1 mouse_genomes_project 8 128209633 128218718 + MGP_129S1SvImJ_P0090957 Cog2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090958.1 MGP_129S1SvImJ_G0034271.1 mouse_genomes_project 8 128224023 128233208 + Cog2 protein_coding retained_intron MGP_129S1SvImJ_T0089817.1 MGP_129S1SvImJ_G0033895.1 mouse_genomes_project 8 86031125 86045840 + MGP_129S1SvImJ_P0089817 Man2b1 protein_coding protein_coding MGP_129S1SvImJ_T0005370.1 MGP_129S1SvImJ_G0004551.1 mouse_genomes_project 8 39871813 39874104 + Gm16192 antisense antisense MGP_129S1SvImJ_T0088169.1 MGP_129S1SvImJ_G0033370.1 mouse_genomes_project 8 10374432 10389727 + MGP_129S1SvImJ_P0088169 Proz protein_coding protein_coding MGP_129S1SvImJ_T0018528.1 MGP_129S1SvImJ_G0015727.1 mouse_genomes_project 8 125905787 125908193 + Gm20681 processed_transcript processed_transcript MGP_129S1SvImJ_T0088257.1 MGP_129S1SvImJ_G0033399.1 mouse_genomes_project 8 12439395 12462810 + MGP_129S1SvImJ_P0088257 Kbtbd11 protein_coding protein_coding MGP_129S1SvImJ_T0088258.1 MGP_129S1SvImJ_G0033399.1 mouse_genomes_project 8 12439686 12456573 + Kbtbd11 protein_coding processed_transcript MGP_129S1SvImJ_T0088259.1 MGP_129S1SvImJ_G0033399.1 mouse_genomes_project 8 12456768 12462810 + MGP_129S1SvImJ_P0088259 Kbtbd11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088260.1 MGP_129S1SvImJ_G0033399.1 mouse_genomes_project 8 12461869 12462441 + Kbtbd11 protein_coding processed_transcript MGP_129S1SvImJ_T0090846.1 MGP_129S1SvImJ_G0034240.1 mouse_genomes_project 8 126655204 126673614 + MGP_129S1SvImJ_P0090846 Spg7 protein_coding protein_coding MGP_129S1SvImJ_T0090847.1 MGP_129S1SvImJ_G0034240.1 mouse_genomes_project 8 126655250 126691819 + MGP_129S1SvImJ_P0090847 Spg7 protein_coding protein_coding MGP_129S1SvImJ_T0090848.1 MGP_129S1SvImJ_G0034240.1 mouse_genomes_project 8 126657436 126691819 + MGP_129S1SvImJ_P0090848 Spg7 protein_coding protein_coding MGP_129S1SvImJ_T0090849.1 MGP_129S1SvImJ_G0034240.1 mouse_genomes_project 8 126657538 126691708 + MGP_129S1SvImJ_P0090849 Spg7 protein_coding protein_coding MGP_129S1SvImJ_T0090850.1 MGP_129S1SvImJ_G0034240.1 mouse_genomes_project 8 126657733 126691812 + MGP_129S1SvImJ_P0090850 Spg7 protein_coding protein_coding MGP_129S1SvImJ_T0090851.1 MGP_129S1SvImJ_G0034240.1 mouse_genomes_project 8 126657765 126691810 + Spg7 protein_coding retained_intron MGP_129S1SvImJ_T0090852.1 MGP_129S1SvImJ_G0034240.1 mouse_genomes_project 8 126666051 126682549 + MGP_129S1SvImJ_P0090852 Spg7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090853.1 MGP_129S1SvImJ_G0034240.1 mouse_genomes_project 8 126674035 126682575 + Spg7 protein_coding retained_intron MGP_129S1SvImJ_T0090854.1 MGP_129S1SvImJ_G0034240.1 mouse_genomes_project 8 126674407 126691812 + MGP_129S1SvImJ_P0090854 Spg7 protein_coding protein_coding MGP_129S1SvImJ_T0090855.1 MGP_129S1SvImJ_G0034240.1 mouse_genomes_project 8 126680815 126688149 + Spg7 protein_coding retained_intron MGP_129S1SvImJ_T0090856.1 MGP_129S1SvImJ_G0034240.1 mouse_genomes_project 8 126680985 126685316 + Spg7 protein_coding processed_transcript MGP_129S1SvImJ_T0090857.1 MGP_129S1SvImJ_G0034240.1 mouse_genomes_project 8 126685275 126691812 + MGP_129S1SvImJ_P0090857 Spg7 protein_coding protein_coding MGP_129S1SvImJ_T0087998.1 MGP_129S1SvImJ_G0033320.1 mouse_genomes_project 8 850961 857947 - MGP_129S1SvImJ_P0087998 Cd209d protein_coding protein_coding MGP_129S1SvImJ_T0089512.1 MGP_129S1SvImJ_G0033806.1 mouse_genomes_project 8 79130820 79134606 - MGP_129S1SvImJ_P0089512 protein_coding protein_coding MGP_129S1SvImJ_T0011746.1 MGP_129S1SvImJ_G0009862.1 mouse_genomes_project 8 107462606 107462695 + Gm24629 misc_RNA misc_RNA MGP_129S1SvImJ_T0089815.1 MGP_129S1SvImJ_G0033894.1 mouse_genomes_project 8 86028841 86030212 + Wdr83os protein_coding retained_intron MGP_129S1SvImJ_T0089816.1 MGP_129S1SvImJ_G0033894.1 mouse_genomes_project 8 86028879 86030210 + MGP_129S1SvImJ_P0089816 Wdr83os protein_coding protein_coding MGP_129S1SvImJ_T0090875.1 MGP_129S1SvImJ_G0034247.1 mouse_genomes_project 8 126825444 126832860 + MGP_129S1SvImJ_P0090875 Cdk10 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089867.1 MGP_129S1SvImJ_G0033913.1 mouse_genomes_project 8 88577707 88603585 + MGP_129S1SvImJ_P0089867 4933402J07Rik protein_coding protein_coding MGP_129S1SvImJ_T0101407.1 MGP_129S1SvImJ_G0039474.1 mouse_genomes_project 8 97254165 97254301 - Gm26493 snoRNA snoRNA MGP_129S1SvImJ_T0088606.1 MGP_129S1SvImJ_G0033537.1 mouse_genomes_project 8 33984345 33998609 + MGP_129S1SvImJ_P0088606 Ppp1r3b protein_coding protein_coding MGP_129S1SvImJ_T0098398.1 MGP_129S1SvImJ_G0036483.1 mouse_genomes_project 8 121027005 121028178 + pseudogene pseudogene MGP_129S1SvImJ_T0090097.1 MGP_129S1SvImJ_G0033989.1 mouse_genomes_project 8 97045133 97063096 - MGP_129S1SvImJ_P0090097 Prss54 protein_coding protein_coding MGP_129S1SvImJ_T0090098.1 MGP_129S1SvImJ_G0033989.1 mouse_genomes_project 8 97045292 97062838 - MGP_129S1SvImJ_P0090098 Prss54 protein_coding protein_coding MGP_129S1SvImJ_T0090402.1 MGP_129S1SvImJ_G0034103.1 mouse_genomes_project 8 110053894 110062887 - MGP_129S1SvImJ_P0090402 Psmd7 protein_coding protein_coding MGP_129S1SvImJ_T0090354.1 MGP_129S1SvImJ_G0034089.1 mouse_genomes_project 8 109287671 109320396 + MGP_129S1SvImJ_P0090354 Cirh1a protein_coding protein_coding MGP_129S1SvImJ_T0009117.1 MGP_129S1SvImJ_G0007333.1 mouse_genomes_project 8 68347974 68353092 - lincRNA lincRNA MGP_129S1SvImJ_T0089989.1 MGP_129S1SvImJ_G0033950.1 mouse_genomes_project 8 95358608 95401070 - MGP_129S1SvImJ_P0089989 Amfr protein_coding protein_coding MGP_129S1SvImJ_T0089990.1 MGP_129S1SvImJ_G0033950.1 mouse_genomes_project 8 95359921 95361936 - Amfr protein_coding retained_intron MGP_129S1SvImJ_T0089991.1 MGP_129S1SvImJ_G0033950.1 mouse_genomes_project 8 95359977 95360981 - Amfr protein_coding processed_transcript MGP_129S1SvImJ_T0089992.1 MGP_129S1SvImJ_G0033950.1 mouse_genomes_project 8 95387703 95400528 - MGP_129S1SvImJ_P0089992 Amfr protein_coding protein_coding MGP_129S1SvImJ_T0088298.1 MGP_129S1SvImJ_G0033414.1 mouse_genomes_project 8 16644751 16646441 + MGP_129S1SvImJ_P0088298 Spag11a protein_coding protein_coding MGP_129S1SvImJ_T0089942.1 MGP_129S1SvImJ_G0033933.1 mouse_genomes_project 8 93056617 93060001 - MGP_129S1SvImJ_P0089942 Irx3 protein_coding protein_coding MGP_129S1SvImJ_T0089943.1 MGP_129S1SvImJ_G0033933.1 mouse_genomes_project 8 93056617 93060000 - MGP_129S1SvImJ_P0089943 Irx3 protein_coding protein_coding MGP_129S1SvImJ_T0090379.1 MGP_129S1SvImJ_G0034099.1 mouse_genomes_project 8 109738435 109779631 + Nfat5 protein_coding retained_intron MGP_129S1SvImJ_T0090380.1 MGP_129S1SvImJ_G0034099.1 mouse_genomes_project 8 109738435 109835699 + MGP_129S1SvImJ_P0090380 Nfat5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090381.1 MGP_129S1SvImJ_G0034099.1 mouse_genomes_project 8 109738435 109828363 + MGP_129S1SvImJ_P0090381 Nfat5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090382.1 MGP_129S1SvImJ_G0034099.1 mouse_genomes_project 8 109738474 109778263 + Nfat5 protein_coding retained_intron MGP_129S1SvImJ_T0090383.1 MGP_129S1SvImJ_G0034099.1 mouse_genomes_project 8 109738524 109828314 + MGP_129S1SvImJ_P0090383 Nfat5 protein_coding protein_coding MGP_129S1SvImJ_T0090384.1 MGP_129S1SvImJ_G0034099.1 mouse_genomes_project 8 109738524 109835690 + MGP_129S1SvImJ_P0090384 Nfat5 protein_coding protein_coding MGP_129S1SvImJ_T0090385.1 MGP_129S1SvImJ_G0034099.1 mouse_genomes_project 8 109738791 109829183 + MGP_129S1SvImJ_P0090385 Nfat5 protein_coding protein_coding MGP_129S1SvImJ_T0090386.1 MGP_129S1SvImJ_G0034099.1 mouse_genomes_project 8 109790454 109829248 + MGP_129S1SvImJ_P0090386 Nfat5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0090387.1 MGP_129S1SvImJ_G0034099.1 mouse_genomes_project 8 109791673 109812057 + Nfat5 protein_coding retained_intron MGP_129S1SvImJ_T0090388.1 MGP_129S1SvImJ_G0034099.1 mouse_genomes_project 8 109791673 109823541 + Nfat5 protein_coding retained_intron MGP_129S1SvImJ_T0090389.1 MGP_129S1SvImJ_G0034099.1 mouse_genomes_project 8 109792078 109826795 + MGP_129S1SvImJ_P0090389 Nfat5 protein_coding protein_coding MGP_129S1SvImJ_T0090390.1 MGP_129S1SvImJ_G0034099.1 mouse_genomes_project 8 109800429 109817910 + MGP_129S1SvImJ_P0090390 Nfat5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090391.1 MGP_129S1SvImJ_G0034099.1 mouse_genomes_project 8 109812041 109829702 + MGP_129S1SvImJ_P0090391 Nfat5 protein_coding protein_coding MGP_129S1SvImJ_T0011734.1 MGP_129S1SvImJ_G0009850.1 mouse_genomes_project 8 23740359 23740681 + Gm23094 misc_RNA misc_RNA MGP_129S1SvImJ_T0011046.1 MGP_129S1SvImJ_G0009162.1 mouse_genomes_project 8 124561989 124562087 - Gm27530 miRNA miRNA MGP_129S1SvImJ_T0018492.1 MGP_129S1SvImJ_G0015714.1 mouse_genomes_project 8 48102254 48130520 + Gm19744 processed_transcript lincRNA MGP_129S1SvImJ_T0018493.1 MGP_129S1SvImJ_G0015714.1 mouse_genomes_project 8 48102317 48106082 + Gm19744 processed_transcript lincRNA MGP_129S1SvImJ_T0018494.1 MGP_129S1SvImJ_G0015714.1 mouse_genomes_project 8 48102392 48103705 + Gm19744 processed_transcript antisense MGP_129S1SvImJ_T0018495.1 MGP_129S1SvImJ_G0015714.1 mouse_genomes_project 8 48102636 48103110 + Gm19744 processed_transcript retained_intron MGP_129S1SvImJ_T0018496.1 MGP_129S1SvImJ_G0015714.1 mouse_genomes_project 8 48102698 48103204 + Gm19744 processed_transcript antisense MGP_129S1SvImJ_T0018497.1 MGP_129S1SvImJ_G0015714.1 mouse_genomes_project 8 48115361 48131405 + Gm19744 processed_transcript lincRNA MGP_129S1SvImJ_T0089129.1 MGP_129S1SvImJ_G0033694.1 mouse_genomes_project 8 70428255 70438174 + Tmem161a protein_coding processed_transcript MGP_129S1SvImJ_T0089130.1 MGP_129S1SvImJ_G0033694.1 mouse_genomes_project 8 70428304 70440911 + MGP_129S1SvImJ_P0089130 Tmem161a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089131.1 MGP_129S1SvImJ_G0033694.1 mouse_genomes_project 8 70428312 70440119 + MGP_129S1SvImJ_P0089131 Tmem161a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089132.1 MGP_129S1SvImJ_G0033694.1 mouse_genomes_project 8 70428315 70432739 + Tmem161a protein_coding retained_intron MGP_129S1SvImJ_T0089133.1 MGP_129S1SvImJ_G0033694.1 mouse_genomes_project 8 70428315 70433013 + Tmem161a protein_coding processed_transcript MGP_129S1SvImJ_T0089134.1 MGP_129S1SvImJ_G0033694.1 mouse_genomes_project 8 70428318 70437982 + MGP_129S1SvImJ_P0089134 Tmem161a protein_coding protein_coding MGP_129S1SvImJ_T0089135.1 MGP_129S1SvImJ_G0033694.1 mouse_genomes_project 8 70428337 70439383 + MGP_129S1SvImJ_P0089135 Tmem161a protein_coding protein_coding MGP_129S1SvImJ_T0089136.1 MGP_129S1SvImJ_G0033694.1 mouse_genomes_project 8 70430175 70440111 + MGP_129S1SvImJ_P0089136 Tmem161a protein_coding protein_coding MGP_129S1SvImJ_T0089137.1 MGP_129S1SvImJ_G0033694.1 mouse_genomes_project 8 70432428 70433146 + Tmem161a protein_coding retained_intron MGP_129S1SvImJ_T0089138.1 MGP_129S1SvImJ_G0033694.1 mouse_genomes_project 8 70432823 70434626 + Tmem161a protein_coding processed_transcript MGP_129S1SvImJ_T0089139.1 MGP_129S1SvImJ_G0033694.1 mouse_genomes_project 8 70433074 70438456 + MGP_129S1SvImJ_P0089139 Tmem161a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089140.1 MGP_129S1SvImJ_G0033694.1 mouse_genomes_project 8 70434468 70438557 + Tmem161a protein_coding retained_intron MGP_129S1SvImJ_T0089141.1 MGP_129S1SvImJ_G0033694.1 mouse_genomes_project 8 70437782 70439276 + Tmem161a protein_coding retained_intron MGP_129S1SvImJ_T0088313.1 MGP_129S1SvImJ_G0033428.1 mouse_genomes_project 8 19091472 19092599 - MGP_129S1SvImJ_P0088313 protein_coding protein_coding MGP_129S1SvImJ_T0090931.1 MGP_129S1SvImJ_G0034260.1 mouse_genomes_project 8 127265142 127267200 + Rhou protein_coding retained_intron MGP_129S1SvImJ_T0090932.1 MGP_129S1SvImJ_G0034260.1 mouse_genomes_project 8 127265142 127275083 + MGP_129S1SvImJ_P0090932 Rhou protein_coding protein_coding MGP_129S1SvImJ_T0005426.1 MGP_129S1SvImJ_G0004600.1 mouse_genomes_project 8 127997532 128005375 - Gm15775 antisense antisense MGP_129S1SvImJ_T0018523.1 MGP_129S1SvImJ_G0015724.1 mouse_genomes_project 8 108479059 108481760 + 1810019D21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018524.1 MGP_129S1SvImJ_G0015724.1 mouse_genomes_project 8 108479094 108481551 + 1810019D21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018525.1 MGP_129S1SvImJ_G0015724.1 mouse_genomes_project 8 108480724 108482185 + 1810019D21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0098715.1 MGP_129S1SvImJ_G0036800.1 mouse_genomes_project 8 69578359 69578655 + Gm25661 ribozyme ribozyme MGP_129S1SvImJ_T0009079.1 MGP_129S1SvImJ_G0007303.1 mouse_genomes_project 8 10007398 10020628 - Gm15348 lincRNA lincRNA MGP_129S1SvImJ_T0089732.1 MGP_129S1SvImJ_G0033875.1 mouse_genomes_project 8 85782645 85794733 + MGP_129S1SvImJ_P0089732 Farsa protein_coding protein_coding MGP_129S1SvImJ_T0089733.1 MGP_129S1SvImJ_G0033875.1 mouse_genomes_project 8 85782651 85794732 + Farsa protein_coding retained_intron MGP_129S1SvImJ_T0089734.1 MGP_129S1SvImJ_G0033875.1 mouse_genomes_project 8 85782665 85792497 + Farsa protein_coding retained_intron MGP_129S1SvImJ_T0089735.1 MGP_129S1SvImJ_G0033875.1 mouse_genomes_project 8 85782673 85794733 + MGP_129S1SvImJ_P0089735 Farsa protein_coding protein_coding MGP_129S1SvImJ_T0089736.1 MGP_129S1SvImJ_G0033875.1 mouse_genomes_project 8 85782676 85794732 + MGP_129S1SvImJ_P0089736 Farsa protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089737.1 MGP_129S1SvImJ_G0033875.1 mouse_genomes_project 8 85793038 85794486 + Farsa protein_coding retained_intron MGP_129S1SvImJ_T0088310.1 MGP_129S1SvImJ_G0033425.1 mouse_genomes_project 8 18705218 18706262 - MGP_129S1SvImJ_P0088310 AY761185 protein_coding protein_coding MGP_129S1SvImJ_T0009113.1 MGP_129S1SvImJ_G0007330.1 mouse_genomes_project 8 61196073 61203422 - 1700001D01Rik lincRNA lincRNA MGP_129S1SvImJ_T0090459.1 MGP_129S1SvImJ_G0034128.1 mouse_genomes_project 8 113500774 113537079 - MGP_129S1SvImJ_P0090459 Sf3b3 protein_coding protein_coding MGP_129S1SvImJ_T0011052.1 MGP_129S1SvImJ_G0009168.1 mouse_genomes_project 8 128800677 128800735 + Gm22197 miRNA miRNA MGP_129S1SvImJ_T0018519.1 MGP_129S1SvImJ_G0015722.1 mouse_genomes_project 8 97322314 97336823 + 4930513N10Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018520.1 MGP_129S1SvImJ_G0015722.1 mouse_genomes_project 8 97322457 97325685 + 4930513N10Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018521.1 MGP_129S1SvImJ_G0015722.1 mouse_genomes_project 8 97324517 97336792 + 4930513N10Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0090330.1 MGP_129S1SvImJ_G0034080.1 mouse_genomes_project 8 108564873 108611693 + MGP_129S1SvImJ_P0090330 Prmt7 protein_coding protein_coding MGP_129S1SvImJ_T0090331.1 MGP_129S1SvImJ_G0034080.1 mouse_genomes_project 8 108564960 108590553 + MGP_129S1SvImJ_P0090331 Prmt7 protein_coding protein_coding MGP_129S1SvImJ_T0090332.1 MGP_129S1SvImJ_G0034080.1 mouse_genomes_project 8 108564974 108598349 + Prmt7 protein_coding retained_intron MGP_129S1SvImJ_T0090333.1 MGP_129S1SvImJ_G0034080.1 mouse_genomes_project 8 108565155 108581250 + MGP_129S1SvImJ_P0090333 Prmt7 protein_coding protein_coding MGP_129S1SvImJ_T0090334.1 MGP_129S1SvImJ_G0034080.1 mouse_genomes_project 8 108566463 108593223 + MGP_129S1SvImJ_P0090334 Prmt7 protein_coding protein_coding MGP_129S1SvImJ_T0090335.1 MGP_129S1SvImJ_G0034080.1 mouse_genomes_project 8 108589688 108592558 + Prmt7 protein_coding processed_transcript MGP_129S1SvImJ_T0090336.1 MGP_129S1SvImJ_G0034080.1 mouse_genomes_project 8 108592924 108599887 + Prmt7 protein_coding processed_transcript MGP_129S1SvImJ_T0091051.1 MGP_129S1SvImJ_G0034300.1 mouse_genomes_project 8 132303632 132466759 + MGP_129S1SvImJ_P0091051 Nrp1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089787.1 MGP_129S1SvImJ_G0033890.1 mouse_genomes_project 8 86006823 86013774 + MGP_129S1SvImJ_P0089787 Fbxw9 protein_coding protein_coding MGP_129S1SvImJ_T0089788.1 MGP_129S1SvImJ_G0033890.1 mouse_genomes_project 8 86006824 86013776 + Fbxw9 protein_coding retained_intron MGP_129S1SvImJ_T0089789.1 MGP_129S1SvImJ_G0033890.1 mouse_genomes_project 8 86006865 86011459 + Fbxw9 protein_coding retained_intron MGP_129S1SvImJ_T0089790.1 MGP_129S1SvImJ_G0033890.1 mouse_genomes_project 8 86007297 86013769 + Fbxw9 protein_coding retained_intron MGP_129S1SvImJ_T0089791.1 MGP_129S1SvImJ_G0033890.1 mouse_genomes_project 8 86007335 86013539 + Fbxw9 protein_coding processed_transcript MGP_129S1SvImJ_T0089792.1 MGP_129S1SvImJ_G0033890.1 mouse_genomes_project 8 86011241 86012983 + Fbxw9 protein_coding retained_intron MGP_129S1SvImJ_T0089793.1 MGP_129S1SvImJ_G0033890.1 mouse_genomes_project 8 86012225 86013020 + Fbxw9 protein_coding processed_transcript MGP_129S1SvImJ_T0089794.1 MGP_129S1SvImJ_G0033890.1 mouse_genomes_project 8 86012279 86013022 + Fbxw9 protein_coding retained_intron MGP_129S1SvImJ_T0089795.1 MGP_129S1SvImJ_G0033890.1 mouse_genomes_project 8 86012720 86013556 + Fbxw9 protein_coding retained_intron MGP_129S1SvImJ_T0005344.1 MGP_129S1SvImJ_G0004533.1 mouse_genomes_project 8 8391888 8408556 + Gm15418 antisense antisense MGP_129S1SvImJ_T0005373.1 MGP_129S1SvImJ_G0004554.1 mouse_genomes_project 8 44778062 44879351 - Sorbs2os antisense antisense MGP_129S1SvImJ_T0088347.1 MGP_129S1SvImJ_G0033449.1 mouse_genomes_project 8 20129589 20219198 + MGP_129S1SvImJ_P0088347 Tpte protein_coding protein_coding MGP_129S1SvImJ_T0005374.1 MGP_129S1SvImJ_G0004555.1 mouse_genomes_project 8 45246577 45250067 + Gm15634 antisense antisense MGP_129S1SvImJ_T0088929.1 MGP_129S1SvImJ_G0033633.1 mouse_genomes_project 8 60877588 61027800 + MGP_129S1SvImJ_P0088929 Nek1 protein_coding protein_coding MGP_129S1SvImJ_T0088930.1 MGP_129S1SvImJ_G0033633.1 mouse_genomes_project 8 60877588 61027807 + MGP_129S1SvImJ_P0088930 Nek1 protein_coding protein_coding MGP_129S1SvImJ_T0088931.1 MGP_129S1SvImJ_G0033633.1 mouse_genomes_project 8 60877593 60930194 + Nek1 protein_coding retained_intron MGP_129S1SvImJ_T0088932.1 MGP_129S1SvImJ_G0033633.1 mouse_genomes_project 8 60877618 61027810 + MGP_129S1SvImJ_P0088932 Nek1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0088933.1 MGP_129S1SvImJ_G0033633.1 mouse_genomes_project 8 60877632 61002965 + Nek1 protein_coding retained_intron MGP_129S1SvImJ_T0088934.1 MGP_129S1SvImJ_G0033633.1 mouse_genomes_project 8 60877634 60915787 + Nek1 protein_coding retained_intron MGP_129S1SvImJ_T0088935.1 MGP_129S1SvImJ_G0033633.1 mouse_genomes_project 8 60877634 60915264 + Nek1 protein_coding retained_intron MGP_129S1SvImJ_T0088936.1 MGP_129S1SvImJ_G0033633.1 mouse_genomes_project 8 60935485 60978105 + MGP_129S1SvImJ_P0088936 Nek1 protein_coding protein_coding MGP_129S1SvImJ_T0089931.1 MGP_129S1SvImJ_G0033931.1 mouse_genomes_project 8 92439016 92540120 - MGP_129S1SvImJ_P0089931 Rpgrip1l protein_coding protein_coding MGP_129S1SvImJ_T0089932.1 MGP_129S1SvImJ_G0033931.1 mouse_genomes_project 8 92440942 92540081 - MGP_129S1SvImJ_P0089932 Rpgrip1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089933.1 MGP_129S1SvImJ_G0033931.1 mouse_genomes_project 8 92496481 92503619 - Rpgrip1l protein_coding retained_intron MGP_129S1SvImJ_T0089934.1 MGP_129S1SvImJ_G0033931.1 mouse_genomes_project 8 92534832 92537901 - MGP_129S1SvImJ_P0089934 Rpgrip1l protein_coding protein_coding MGP_129S1SvImJ_T0089147.1 MGP_129S1SvImJ_G0033696.1 mouse_genomes_project 8 70481677 70494536 - MGP_129S1SvImJ_P0089147 Armc6 protein_coding protein_coding MGP_129S1SvImJ_T0089148.1 MGP_129S1SvImJ_G0033696.1 mouse_genomes_project 8 70481703 70484317 - Armc6 protein_coding retained_intron MGP_129S1SvImJ_T0089149.1 MGP_129S1SvImJ_G0033696.1 mouse_genomes_project 8 70481982 70483789 - Armc6 protein_coding retained_intron MGP_129S1SvImJ_T0089150.1 MGP_129S1SvImJ_G0033696.1 mouse_genomes_project 8 70484713 70486705 - Armc6 protein_coding retained_intron MGP_129S1SvImJ_T0089151.1 MGP_129S1SvImJ_G0033696.1 mouse_genomes_project 8 70486137 70494519 - Armc6 protein_coding retained_intron MGP_129S1SvImJ_T0089152.1 MGP_129S1SvImJ_G0033696.1 mouse_genomes_project 8 70486845 70494190 - MGP_129S1SvImJ_P0089152 Armc6 protein_coding protein_coding MGP_129S1SvImJ_T0089720.1 MGP_129S1SvImJ_G0033872.1 mouse_genomes_project 8 85757598 85761639 - MGP_129S1SvImJ_P0089720 Rad23a protein_coding protein_coding MGP_129S1SvImJ_T0089721.1 MGP_129S1SvImJ_G0033872.1 mouse_genomes_project 8 85758231 85764234 - MGP_129S1SvImJ_P0089721 Rad23a protein_coding protein_coding MGP_129S1SvImJ_T0089722.1 MGP_129S1SvImJ_G0033872.1 mouse_genomes_project 8 85758489 85764258 - MGP_129S1SvImJ_P0089722 Rad23a protein_coding protein_coding MGP_129S1SvImJ_T0089723.1 MGP_129S1SvImJ_G0033872.1 mouse_genomes_project 8 85759211 85764258 - MGP_129S1SvImJ_P0089723 Rad23a protein_coding protein_coding MGP_129S1SvImJ_T0089724.1 MGP_129S1SvImJ_G0033872.1 mouse_genomes_project 8 85761313 85762258 - Rad23a protein_coding retained_intron MGP_129S1SvImJ_T0089725.1 MGP_129S1SvImJ_G0033872.1 mouse_genomes_project 8 85761326 85762272 - Rad23a protein_coding retained_intron MGP_129S1SvImJ_T0089726.1 MGP_129S1SvImJ_G0033872.1 mouse_genomes_project 8 85761890 85764229 - Rad23a protein_coding retained_intron MGP_129S1SvImJ_T0089382.1 MGP_129S1SvImJ_G0033761.1 mouse_genomes_project 8 72103122 72104485 + MGP_129S1SvImJ_P0089382 Insl3 protein_coding protein_coding MGP_129S1SvImJ_T0090921.1 MGP_129S1SvImJ_G0034257.1 mouse_genomes_project 8 127082074 127110016 + MGP_129S1SvImJ_P0090921 Afg3l1 protein_coding protein_coding MGP_129S1SvImJ_T0090922.1 MGP_129S1SvImJ_G0034257.1 mouse_genomes_project 8 127082074 127110016 + MGP_129S1SvImJ_P0090922 Afg3l1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090923.1 MGP_129S1SvImJ_G0034257.1 mouse_genomes_project 8 127082111 127086904 + Afg3l1 protein_coding retained_intron MGP_129S1SvImJ_T0090924.1 MGP_129S1SvImJ_G0034257.1 mouse_genomes_project 8 127085976 127095824 + Afg3l1 protein_coding processed_transcript MGP_129S1SvImJ_T0090925.1 MGP_129S1SvImJ_G0034257.1 mouse_genomes_project 8 127099066 127105040 + Afg3l1 protein_coding retained_intron MGP_129S1SvImJ_T0090926.1 MGP_129S1SvImJ_G0034257.1 mouse_genomes_project 8 127107184 127107714 + Afg3l1 protein_coding retained_intron MGP_129S1SvImJ_T0009155.1 MGP_129S1SvImJ_G0007362.1 mouse_genomes_project 8 89239412 89239881 + 9430002A10Rik lincRNA lincRNA MGP_129S1SvImJ_T0009156.1 MGP_129S1SvImJ_G0007362.1 mouse_genomes_project 8 89239412 89239887 + 9430002A10Rik lincRNA lincRNA MGP_129S1SvImJ_T0018484.1 MGP_129S1SvImJ_G0015709.1 mouse_genomes_project 8 23595133 23603722 - Gm16159 processed_transcript processed_transcript MGP_129S1SvImJ_T0018485.1 MGP_129S1SvImJ_G0015709.1 mouse_genomes_project 8 23600316 23601199 - Gm16159 processed_transcript processed_transcript MGP_129S1SvImJ_T0090651.1 MGP_129S1SvImJ_G0034194.1 mouse_genomes_project 8 123229276 123243940 + MGP_129S1SvImJ_P0090651 Klhl36 protein_coding protein_coding MGP_129S1SvImJ_T0089279.1 MGP_129S1SvImJ_G0033736.1 mouse_genomes_project 8 71248502 71250108 + MGP_129S1SvImJ_P0089279 protein_coding protein_coding MGP_129S1SvImJ_T0089420.1 MGP_129S1SvImJ_G0033770.1 mouse_genomes_project 8 72568510 72572424 + MGP_129S1SvImJ_P0089420 Olfr373 protein_coding protein_coding MGP_129S1SvImJ_T0089542.1 MGP_129S1SvImJ_G0033819.1 mouse_genomes_project 8 81421420 81464235 - MGP_129S1SvImJ_P0089542 Smarca5 protein_coding protein_coding MGP_129S1SvImJ_T0089543.1 MGP_129S1SvImJ_G0033819.1 mouse_genomes_project 8 81430544 81464235 - Smarca5 protein_coding processed_transcript MGP_129S1SvImJ_T0089544.1 MGP_129S1SvImJ_G0033819.1 mouse_genomes_project 8 81434485 81436758 - Smarca5 protein_coding retained_intron MGP_129S1SvImJ_T0089545.1 MGP_129S1SvImJ_G0033819.1 mouse_genomes_project 8 81434797 81435921 - Smarca5 protein_coding retained_intron MGP_129S1SvImJ_T0089546.1 MGP_129S1SvImJ_G0033819.1 mouse_genomes_project 8 81441010 81442617 - Smarca5 protein_coding retained_intron MGP_129S1SvImJ_T0089547.1 MGP_129S1SvImJ_G0033819.1 mouse_genomes_project 8 81450449 81451463 - Smarca5 protein_coding retained_intron MGP_129S1SvImJ_T0088753.1 MGP_129S1SvImJ_G0033581.1 mouse_genomes_project 8 45058103 45081264 + MGP_129S1SvImJ_P0088753 Ufsp2 protein_coding protein_coding MGP_129S1SvImJ_T0088754.1 MGP_129S1SvImJ_G0033581.1 mouse_genomes_project 8 45058109 45081163 + Ufsp2 protein_coding retained_intron MGP_129S1SvImJ_T0088755.1 MGP_129S1SvImJ_G0033581.1 mouse_genomes_project 8 45058119 45063302 + Ufsp2 protein_coding retained_intron MGP_129S1SvImJ_T0088756.1 MGP_129S1SvImJ_G0033581.1 mouse_genomes_project 8 45058125 45067806 + Ufsp2 protein_coding processed_transcript MGP_129S1SvImJ_T0088757.1 MGP_129S1SvImJ_G0033581.1 mouse_genomes_project 8 45058153 45062831 + Ufsp2 protein_coding processed_transcript MGP_129S1SvImJ_T0088758.1 MGP_129S1SvImJ_G0033581.1 mouse_genomes_project 8 45079433 45081166 + Ufsp2 protein_coding retained_intron MGP_129S1SvImJ_T0100114.1 MGP_129S1SvImJ_G0038181.1 mouse_genomes_project 8 49917196 49917259 + Gm23986 snRNA snRNA MGP_129S1SvImJ_T0090221.1 MGP_129S1SvImJ_G0034034.1 mouse_genomes_project 8 107541763 107547256 + MGP_129S1SvImJ_P0090221 Nol3 protein_coding protein_coding MGP_129S1SvImJ_T0089954.1 MGP_129S1SvImJ_G0033940.1 mouse_genomes_project 8 94344829 94371669 - MGP_129S1SvImJ_P0089954 Ces1a protein_coding protein_coding MGP_129S1SvImJ_T0088519.1 MGP_129S1SvImJ_G0033501.1 mouse_genomes_project 8 25269468 25311054 + MGP_129S1SvImJ_P0088519 Adgra2 protein_coding protein_coding MGP_129S1SvImJ_T0088520.1 MGP_129S1SvImJ_G0033501.1 mouse_genomes_project 8 25269483 25311055 + MGP_129S1SvImJ_P0088520 Adgra2 protein_coding protein_coding MGP_129S1SvImJ_T0088521.1 MGP_129S1SvImJ_G0033501.1 mouse_genomes_project 8 25300510 25305212 + MGP_129S1SvImJ_P0088521 Adgra2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088522.1 MGP_129S1SvImJ_G0033501.1 mouse_genomes_project 8 25303746 25309242 + MGP_129S1SvImJ_P0088522 Adgra2 protein_coding protein_coding MGP_129S1SvImJ_T0018498.1 MGP_129S1SvImJ_G0015715.1 mouse_genomes_project 8 57015468 57031957 - AV026068 processed_transcript lincRNA MGP_129S1SvImJ_T0018499.1 MGP_129S1SvImJ_G0015715.1 mouse_genomes_project 8 57015468 57031539 - AV026068 processed_transcript lincRNA MGP_129S1SvImJ_T0018500.1 MGP_129S1SvImJ_G0015715.1 mouse_genomes_project 8 57015468 57031615 - AV026068 processed_transcript retained_intron MGP_129S1SvImJ_T0018501.1 MGP_129S1SvImJ_G0015715.1 mouse_genomes_project 8 57015468 57032080 - AV026068 processed_transcript lincRNA MGP_129S1SvImJ_T0018502.1 MGP_129S1SvImJ_G0015715.1 mouse_genomes_project 8 57015474 57016560 - AV026068 processed_transcript lincRNA MGP_129S1SvImJ_T0018503.1 MGP_129S1SvImJ_G0015715.1 mouse_genomes_project 8 57016444 57032051 - AV026068 processed_transcript retained_intron MGP_129S1SvImJ_T0018504.1 MGP_129S1SvImJ_G0015715.1 mouse_genomes_project 8 57018151 57031989 - AV026068 processed_transcript retained_intron MGP_129S1SvImJ_T0018505.1 MGP_129S1SvImJ_G0015715.1 mouse_genomes_project 8 57025505 57031970 - AV026068 processed_transcript retained_intron MGP_129S1SvImJ_T0088328.1 MGP_129S1SvImJ_G0033442.1 mouse_genomes_project 8 19827774 19900817 - MGP_129S1SvImJ_P0088328 Atp7b protein_coding protein_coding MGP_129S1SvImJ_T0088329.1 MGP_129S1SvImJ_G0033442.1 mouse_genomes_project 8 19829635 19900531 - MGP_129S1SvImJ_P0088329 Atp7b protein_coding protein_coding MGP_129S1SvImJ_T0089060.1 MGP_129S1SvImJ_G0033669.1 mouse_genomes_project 8 69554653 69555040 - MGP_129S1SvImJ_P0089060 protein_coding protein_coding MGP_129S1SvImJ_T0090140.1 MGP_129S1SvImJ_G0034005.1 mouse_genomes_project 8 106398862 106441392 - MGP_129S1SvImJ_P0090140 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090141.1 MGP_129S1SvImJ_G0034005.1 mouse_genomes_project 8 106414961 106441365 - MGP_129S1SvImJ_P0090141 protein_coding protein_coding MGP_129S1SvImJ_T0090142.1 MGP_129S1SvImJ_G0034005.1 mouse_genomes_project 8 106414979 106440084 - MGP_129S1SvImJ_P0090142 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090143.1 MGP_129S1SvImJ_G0034005.1 mouse_genomes_project 8 106415262 106441343 - MGP_129S1SvImJ_P0090143 protein_coding protein_coding MGP_129S1SvImJ_T0090144.1 MGP_129S1SvImJ_G0034005.1 mouse_genomes_project 8 106415881 106441456 - MGP_129S1SvImJ_P0090144 protein_coding protein_coding MGP_129S1SvImJ_T0089006.1 MGP_129S1SvImJ_G0033655.1 mouse_genomes_project 8 66933091 66965225 + MGP_129S1SvImJ_P0089006 Naf1 protein_coding protein_coding MGP_129S1SvImJ_T0090734.1 MGP_129S1SvImJ_G0034210.1 mouse_genomes_project 8 124605294 124607999 + MGP_129S1SvImJ_P0090734 Foxl1 protein_coding protein_coding MGP_129S1SvImJ_T0088069.1 MGP_129S1SvImJ_G0033336.1 mouse_genomes_project 8 1595908 1613962 + MGP_129S1SvImJ_P0088069 Zfp958 protein_coding protein_coding MGP_129S1SvImJ_T0088070.1 MGP_129S1SvImJ_G0033336.1 mouse_genomes_project 8 1610252 1613793 + MGP_129S1SvImJ_P0088070 Zfp958 protein_coding protein_coding MGP_129S1SvImJ_T0090710.1 MGP_129S1SvImJ_G0034206.1 mouse_genomes_project 8 124187578 124209006 + MGP_129S1SvImJ_P0090710 Irf8 protein_coding protein_coding MGP_129S1SvImJ_T0090711.1 MGP_129S1SvImJ_G0034206.1 mouse_genomes_project 8 124187579 124194455 + Irf8 protein_coding retained_intron MGP_129S1SvImJ_T0090712.1 MGP_129S1SvImJ_G0034206.1 mouse_genomes_project 8 124187605 124205790 + MGP_129S1SvImJ_P0090712 Irf8 protein_coding protein_coding MGP_129S1SvImJ_T0090713.1 MGP_129S1SvImJ_G0034206.1 mouse_genomes_project 8 124189859 124207893 + MGP_129S1SvImJ_P0090713 Irf8 protein_coding protein_coding MGP_129S1SvImJ_T0090715.1 MGP_129S1SvImJ_G0034206.1 mouse_genomes_project 8 124197791 124206045 + Irf8 protein_coding retained_intron MGP_129S1SvImJ_T0090716.1 MGP_129S1SvImJ_G0034206.1 mouse_genomes_project 8 124204520 124206023 + Irf8 protein_coding processed_transcript MGP_129S1SvImJ_T0018527.1 MGP_129S1SvImJ_G0015726.1 mouse_genomes_project 8 113866405 113881828 - 9430091E24Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0089586.1 MGP_129S1SvImJ_G0033835.1 mouse_genomes_project 8 84441965 84445719 + MGP_129S1SvImJ_P0089586 Dnajb1 protein_coding protein_coding MGP_129S1SvImJ_T0016012.1 MGP_129S1SvImJ_G0014101.1 mouse_genomes_project 8 100822549 100825253 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0090514.1 MGP_129S1SvImJ_G0034140.1 mouse_genomes_project 8 114230024 114303882 - MGP_129S1SvImJ_P0090514 Wdr59 protein_coding protein_coding MGP_129S1SvImJ_T0090515.1 MGP_129S1SvImJ_G0034140.1 mouse_genomes_project 8 114230024 114303882 - MGP_129S1SvImJ_P0090515 Wdr59 protein_coding protein_coding MGP_129S1SvImJ_T0018490.1 MGP_129S1SvImJ_G0015712.1 mouse_genomes_project 8 44081264 44085809 - AY512931 processed_transcript processed_transcript MGP_129S1SvImJ_T0089922.1 MGP_129S1SvImJ_G0033930.1 mouse_genomes_project 8 92333753 92352838 - MGP_129S1SvImJ_P0089922 Aktip protein_coding protein_coding MGP_129S1SvImJ_T0089926.1 MGP_129S1SvImJ_G0033930.1 mouse_genomes_project 8 92345237 92355940 - MGP_129S1SvImJ_P0089926 Aktip protein_coding protein_coding MGP_129S1SvImJ_T0089927.1 MGP_129S1SvImJ_G0033930.1 mouse_genomes_project 8 92345237 92355417 - MGP_129S1SvImJ_P0089927 Aktip protein_coding protein_coding MGP_129S1SvImJ_T0089928.1 MGP_129S1SvImJ_G0033930.1 mouse_genomes_project 8 92346192 92355498 - MGP_129S1SvImJ_P0089928 Aktip protein_coding protein_coding MGP_129S1SvImJ_T0089929.1 MGP_129S1SvImJ_G0033930.1 mouse_genomes_project 8 92346354 92355502 - MGP_129S1SvImJ_P0089929 Aktip protein_coding protein_coding MGP_129S1SvImJ_T0089930.1 MGP_129S1SvImJ_G0033930.1 mouse_genomes_project 8 92352771 92353576 - Aktip protein_coding processed_transcript MGP_129S1SvImJ_T0090605.1 MGP_129S1SvImJ_G0034175.1 mouse_genomes_project 8 120868034 120878170 - MGP_129S1SvImJ_P0090605 Sdr42e1 protein_coding protein_coding MGP_129S1SvImJ_T0090606.1 MGP_129S1SvImJ_G0034175.1 mouse_genomes_project 8 120868037 120880312 - MGP_129S1SvImJ_P0090606 Sdr42e1 protein_coding protein_coding MGP_129S1SvImJ_T0090607.1 MGP_129S1SvImJ_G0034175.1 mouse_genomes_project 8 120869968 120880312 - MGP_129S1SvImJ_P0090607 Sdr42e1 protein_coding protein_coding MGP_129S1SvImJ_T0099012.1 MGP_129S1SvImJ_G0037085.1 mouse_genomes_project 8 123476758 123479435 + Gm15898 sense_intronic sense_intronic MGP_129S1SvImJ_T0016004.1 MGP_129S1SvImJ_G0014093.1 mouse_genomes_project 8 84157877 84158355 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005389.1 MGP_129S1SvImJ_G0004568.1 mouse_genomes_project 8 69260135 69260847 + antisense antisense MGP_129S1SvImJ_T0010984.1 MGP_129S1SvImJ_G0009100.1 mouse_genomes_project 8 37041609 37041679 - Mir383 miRNA miRNA MGP_129S1SvImJ_T0015990.1 MGP_129S1SvImJ_G0014079.1 mouse_genomes_project 8 68926491 68927116 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0089261.1 MGP_129S1SvImJ_G0033725.1 mouse_genomes_project 8 71063723 71067616 - MGP_129S1SvImJ_P0089261 Ifi30 protein_coding protein_coding MGP_129S1SvImJ_T0088603.1 MGP_129S1SvImJ_G0033534.1 mouse_genomes_project 8 32850788 32851249 + MGP_129S1SvImJ_P0088603 protein_coding protein_coding MGP_129S1SvImJ_T0087996.1 MGP_129S1SvImJ_G0033318.1 mouse_genomes_project 8 702517 708104 - MGP_129S1SvImJ_P0087996 Cd209a protein_coding protein_coding MGP_129S1SvImJ_T0101424.1 MGP_129S1SvImJ_G0039491.1 mouse_genomes_project 8 132991428 132991560 + Gm22545 snoRNA snoRNA MGP_129S1SvImJ_T0089498.1 MGP_129S1SvImJ_G0033802.1 mouse_genomes_project 8 78182057 78198814 - MGP_129S1SvImJ_P0089498 Tmem184c protein_coding protein_coding MGP_129S1SvImJ_T0089499.1 MGP_129S1SvImJ_G0033802.1 mouse_genomes_project 8 78191412 78198859 - MGP_129S1SvImJ_P0089499 Tmem184c protein_coding protein_coding MGP_129S1SvImJ_T0089500.1 MGP_129S1SvImJ_G0033802.1 mouse_genomes_project 8 78194909 78198829 - MGP_129S1SvImJ_P0089500 Tmem184c protein_coding protein_coding MGP_129S1SvImJ_T0005410.1 MGP_129S1SvImJ_G0004585.1 mouse_genomes_project 8 115428218 115444233 - Gm26994 antisense antisense MGP_129S1SvImJ_T0089005.1 MGP_129S1SvImJ_G0033654.1 mouse_genomes_project 8 66758032 66767608 + MGP_129S1SvImJ_P0089005 Npy1r protein_coding protein_coding MGP_129S1SvImJ_T0101403.1 MGP_129S1SvImJ_G0039470.1 mouse_genomes_project 8 85995705 85995775 + Gm25506 snoRNA snoRNA MGP_129S1SvImJ_T0016017.1 MGP_129S1SvImJ_G0014106.1 mouse_genomes_project 8 114078028 114078235 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0088659.1 MGP_129S1SvImJ_G0033555.1 mouse_genomes_project 8 39355427 39441179 - MGP_129S1SvImJ_P0088659 Mtmr7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088660.1 MGP_129S1SvImJ_G0033555.1 mouse_genomes_project 8 39355433 39441166 - MGP_129S1SvImJ_P0088660 Mtmr7 protein_coding protein_coding MGP_129S1SvImJ_T0088661.1 MGP_129S1SvImJ_G0033555.1 mouse_genomes_project 8 39358211 39394450 - MGP_129S1SvImJ_P0088661 Mtmr7 protein_coding protein_coding MGP_129S1SvImJ_T0088662.1 MGP_129S1SvImJ_G0033555.1 mouse_genomes_project 8 39359018 39441182 - MGP_129S1SvImJ_P0088662 Mtmr7 protein_coding protein_coding MGP_129S1SvImJ_T0088663.1 MGP_129S1SvImJ_G0033555.1 mouse_genomes_project 8 39369261 39441149 - MGP_129S1SvImJ_P0088663 Mtmr7 protein_coding protein_coding MGP_129S1SvImJ_T0088664.1 MGP_129S1SvImJ_G0033555.1 mouse_genomes_project 8 39410784 39441187 - Mtmr7 protein_coding processed_transcript MGP_129S1SvImJ_T0090498.1 MGP_129S1SvImJ_G0034136.1 mouse_genomes_project 8 113827516 113848381 + MGP_129S1SvImJ_P0090498 Pdpr protein_coding protein_coding MGP_129S1SvImJ_T0090499.1 MGP_129S1SvImJ_G0034136.1 mouse_genomes_project 8 113827527 113874404 + MGP_129S1SvImJ_P0090499 Pdpr protein_coding protein_coding MGP_129S1SvImJ_T0090500.1 MGP_129S1SvImJ_G0034136.1 mouse_genomes_project 8 113827541 113872477 + MGP_129S1SvImJ_P0090500 Pdpr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0009114.1 MGP_129S1SvImJ_G0007331.1 mouse_genomes_project 8 65114798 65156986 - lincRNA lincRNA MGP_129S1SvImJ_T0090550.1 MGP_129S1SvImJ_G0034154.1 mouse_genomes_project 8 115444700 115743612 + Cntnap4 protein_coding retained_intron MGP_129S1SvImJ_T0090551.1 MGP_129S1SvImJ_G0034154.1 mouse_genomes_project 8 115444700 115766867 + MGP_129S1SvImJ_P0090551 Cntnap4 protein_coding protein_coding MGP_129S1SvImJ_T0090552.1 MGP_129S1SvImJ_G0034154.1 mouse_genomes_project 8 115444700 115766855 + MGP_129S1SvImJ_P0090552 Cntnap4 protein_coding protein_coding MGP_129S1SvImJ_T0090553.1 MGP_129S1SvImJ_G0034154.1 mouse_genomes_project 8 115444712 115676105 + Cntnap4 protein_coding retained_intron MGP_129S1SvImJ_T0090554.1 MGP_129S1SvImJ_G0034154.1 mouse_genomes_project 8 115612419 115615801 + Cntnap4 protein_coding processed_transcript MGP_129S1SvImJ_T0090555.1 MGP_129S1SvImJ_G0034154.1 mouse_genomes_project 8 115660241 115680594 + Cntnap4 protein_coding processed_transcript MGP_129S1SvImJ_T0089945.1 MGP_129S1SvImJ_G0033935.1 mouse_genomes_project 8 93980638 93987245 + MGP_129S1SvImJ_P0089945 Irx6 protein_coding protein_coding MGP_129S1SvImJ_T0089946.1 MGP_129S1SvImJ_G0033935.1 mouse_genomes_project 8 93981116 93987245 + MGP_129S1SvImJ_P0089946 Irx6 protein_coding protein_coding MGP_129S1SvImJ_T0088119.1 MGP_129S1SvImJ_G0033361.1 mouse_genomes_project 8 9561301 9563140 + MGP_129S1SvImJ_P0088119 A230072I06Rik protein_coding protein_coding MGP_129S1SvImJ_T0088498.1 MGP_129S1SvImJ_G0033493.1 mouse_genomes_project 8 24062614 24078859 - MGP_129S1SvImJ_P0088498 Pomk protein_coding protein_coding MGP_129S1SvImJ_T0101363.1 MGP_129S1SvImJ_G0039430.1 mouse_genomes_project 8 11253377 11253507 + Gm24698 snoRNA snoRNA MGP_129S1SvImJ_T0090571.1 MGP_129S1SvImJ_G0034161.1 mouse_genomes_project 8 117417105 118373081 + MGP_129S1SvImJ_P0090571 Wwox protein_coding protein_coding MGP_129S1SvImJ_T0090572.1 MGP_129S1SvImJ_G0034161.1 mouse_genomes_project 8 117417145 117711396 + MGP_129S1SvImJ_P0090572 Wwox protein_coding protein_coding MGP_129S1SvImJ_T0090573.1 MGP_129S1SvImJ_G0034161.1 mouse_genomes_project 8 117417145 117869667 + MGP_129S1SvImJ_P0090573 Wwox protein_coding protein_coding MGP_129S1SvImJ_T0090574.1 MGP_129S1SvImJ_G0034161.1 mouse_genomes_project 8 117417152 117431266 + Wwox protein_coding processed_transcript MGP_129S1SvImJ_T0090575.1 MGP_129S1SvImJ_G0034161.1 mouse_genomes_project 8 117417152 117451931 + MGP_129S1SvImJ_P0090575 Wwox protein_coding protein_coding MGP_129S1SvImJ_T0090576.1 MGP_129S1SvImJ_G0034161.1 mouse_genomes_project 8 117425679 117499892 + Wwox protein_coding processed_transcript MGP_129S1SvImJ_T0090577.1 MGP_129S1SvImJ_G0034161.1 mouse_genomes_project 8 117598081 117699145 + Wwox protein_coding processed_transcript MGP_129S1SvImJ_T0090578.1 MGP_129S1SvImJ_G0034161.1 mouse_genomes_project 8 117704948 118372516 + Wwox protein_coding processed_transcript MGP_129S1SvImJ_T0090579.1 MGP_129S1SvImJ_G0034161.1 mouse_genomes_project 8 117704948 118031696 + Wwox protein_coding processed_transcript MGP_129S1SvImJ_T0100143.1 MGP_129S1SvImJ_G0038210.1 mouse_genomes_project 8 118635411 118635515 - Gm23677 snRNA snRNA MGP_129S1SvImJ_T0088349.1 MGP_129S1SvImJ_G0033451.1 mouse_genomes_project 8 20260251 20280415 + MGP_129S1SvImJ_P0088349 Mrps31 protein_coding protein_coding MGP_129S1SvImJ_T0101393.1 MGP_129S1SvImJ_G0039460.1 mouse_genomes_project 8 66993202 66993331 - Gm25275 snoRNA snoRNA MGP_129S1SvImJ_T0091018.1 MGP_129S1SvImJ_G0034293.1 mouse_genomes_project 8 130173092 130173535 + MGP_129S1SvImJ_P0091018 protein_coding protein_coding MGP_129S1SvImJ_T0090338.1 MGP_129S1SvImJ_G0034082.1 mouse_genomes_project 8 108778885 108789436 + MGP_129S1SvImJ_P0090338 Zfp90 protein_coding protein_coding MGP_129S1SvImJ_T0101380.1 MGP_129S1SvImJ_G0039447.1 mouse_genomes_project 8 42304027 42304157 + Gm22986 snoRNA snoRNA MGP_129S1SvImJ_T0088318.1 MGP_129S1SvImJ_G0033433.1 mouse_genomes_project 8 19615214 19619261 + MGP_129S1SvImJ_P0088318 Defb2 protein_coding protein_coding MGP_129S1SvImJ_T0088052.1 MGP_129S1SvImJ_G0033334.1 mouse_genomes_project 8 1311772 1349702 + MGP_129S1SvImJ_P0088052 Ccl25 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088053.1 MGP_129S1SvImJ_G0033334.1 mouse_genomes_project 8 1311789 1337384 + MGP_129S1SvImJ_P0088053 Ccl25 protein_coding non_stop_decay MGP_129S1SvImJ_T0088054.1 MGP_129S1SvImJ_G0033334.1 mouse_genomes_project 8 1311792 1337384 + MGP_129S1SvImJ_P0088054 Ccl25 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088055.1 MGP_129S1SvImJ_G0033334.1 mouse_genomes_project 8 1311795 1349358 + MGP_129S1SvImJ_P0088055 Ccl25 protein_coding protein_coding MGP_129S1SvImJ_T0088056.1 MGP_129S1SvImJ_G0033334.1 mouse_genomes_project 8 1311798 1342695 + MGP_129S1SvImJ_P0088056 Ccl25 protein_coding protein_coding MGP_129S1SvImJ_T0088057.1 MGP_129S1SvImJ_G0033334.1 mouse_genomes_project 8 1311803 1321186 + Ccl25 protein_coding processed_transcript MGP_129S1SvImJ_T0088058.1 MGP_129S1SvImJ_G0033334.1 mouse_genomes_project 8 1338184 1349724 + MGP_129S1SvImJ_P0088058 Ccl25 protein_coding protein_coding MGP_129S1SvImJ_T0088059.1 MGP_129S1SvImJ_G0033334.1 mouse_genomes_project 8 1338184 1347645 + MGP_129S1SvImJ_P0088059 Ccl25 protein_coding protein_coding MGP_129S1SvImJ_T0090276.1 MGP_129S1SvImJ_G0034057.1 mouse_genomes_project 8 108011594 108013548 + MGP_129S1SvImJ_P0090276 4933405L10Rik protein_coding protein_coding MGP_129S1SvImJ_T0089438.1 MGP_129S1SvImJ_G0033780.1 mouse_genomes_project 8 72824219 72912850 - MGP_129S1SvImJ_P0089438 Eps15l1 protein_coding protein_coding MGP_129S1SvImJ_T0088842.1 MGP_129S1SvImJ_G0033606.1 mouse_genomes_project 8 47449331 47683869 - MGP_129S1SvImJ_P0088842 Tenm3 protein_coding protein_coding MGP_129S1SvImJ_T0088843.1 MGP_129S1SvImJ_G0033606.1 mouse_genomes_project 8 47451347 48102622 - MGP_129S1SvImJ_P0088843 Tenm3 protein_coding protein_coding MGP_129S1SvImJ_T0088844.1 MGP_129S1SvImJ_G0033606.1 mouse_genomes_project 8 47451370 47923318 - MGP_129S1SvImJ_P0088844 Tenm3 protein_coding protein_coding MGP_129S1SvImJ_T0088845.1 MGP_129S1SvImJ_G0033606.1 mouse_genomes_project 8 47507877 47532041 - Tenm3 protein_coding processed_transcript MGP_129S1SvImJ_T0088846.1 MGP_129S1SvImJ_G0033606.1 mouse_genomes_project 8 47567044 47797623 - MGP_129S1SvImJ_P0088846 Tenm3 protein_coding protein_coding MGP_129S1SvImJ_T0088847.1 MGP_129S1SvImJ_G0033606.1 mouse_genomes_project 8 47633254 47797969 - MGP_129S1SvImJ_P0088847 Tenm3 protein_coding protein_coding MGP_129S1SvImJ_T0088848.1 MGP_129S1SvImJ_G0033606.1 mouse_genomes_project 8 47633254 47797776 - MGP_129S1SvImJ_P0088848 Tenm3 protein_coding protein_coding MGP_129S1SvImJ_T0089838.1 MGP_129S1SvImJ_G0033905.1 mouse_genomes_project 8 86673563 86807000 - MGP_129S1SvImJ_P0089838 Itfg1 protein_coding protein_coding MGP_129S1SvImJ_T0089073.1 MGP_129S1SvImJ_G0033675.1 mouse_genomes_project 8 69975318 69989831 - MGP_129S1SvImJ_P0089073 Zfp866 protein_coding protein_coding MGP_129S1SvImJ_T0089880.1 MGP_129S1SvImJ_G0033916.1 mouse_genomes_project 8 89196299 89236867 + MGP_129S1SvImJ_P0089880 Heatr3 protein_coding protein_coding MGP_129S1SvImJ_T0089881.1 MGP_129S1SvImJ_G0033916.1 mouse_genomes_project 8 89196300 89236837 + MGP_129S1SvImJ_P0089881 Heatr3 protein_coding protein_coding MGP_129S1SvImJ_T0089882.1 MGP_129S1SvImJ_G0033916.1 mouse_genomes_project 8 89222072 89223757 + Heatr3 protein_coding retained_intron MGP_129S1SvImJ_T0089883.1 MGP_129S1SvImJ_G0033916.1 mouse_genomes_project 8 89226510 89236867 + Heatr3 protein_coding retained_intron MGP_129S1SvImJ_T0089884.1 MGP_129S1SvImJ_G0033916.1 mouse_genomes_project 8 89229466 89231815 + Heatr3 protein_coding retained_intron MGP_129S1SvImJ_T0090093.1 MGP_129S1SvImJ_G0033985.1 mouse_genomes_project 8 96833730 96857207 + MGP_129S1SvImJ_P0090093 Mmp15 protein_coding protein_coding MGP_129S1SvImJ_T0010994.1 MGP_129S1SvImJ_G0009110.1 mouse_genomes_project 8 71210491 71210554 - Mir7067 miRNA miRNA MGP_129S1SvImJ_T0015985.1 MGP_129S1SvImJ_G0014074.1 mouse_genomes_project 8 61007744 61008117 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0088348.1 MGP_129S1SvImJ_G0033450.1 mouse_genomes_project 8 20223333 20246370 - MGP_129S1SvImJ_P0088348 Slc25a15 protein_coding protein_coding MGP_129S1SvImJ_T0090444.1 MGP_129S1SvImJ_G0034123.1 mouse_genomes_project 8 112869199 112874749 + MGP_129S1SvImJ_P0090444 Cmtr2 protein_coding protein_coding MGP_129S1SvImJ_T0090445.1 MGP_129S1SvImJ_G0034123.1 mouse_genomes_project 8 112871523 112878021 + MGP_129S1SvImJ_P0090445 Cmtr2 protein_coding protein_coding MGP_129S1SvImJ_T0088891.1 MGP_129S1SvImJ_G0033622.1 mouse_genomes_project 8 57180087 57206311 + MGP_129S1SvImJ_P0088891 Scrg1 protein_coding protein_coding MGP_129S1SvImJ_T0088796.1 MGP_129S1SvImJ_G0033589.1 mouse_genomes_project 8 45655639 45684050 + MGP_129S1SvImJ_P0088796 Cenpu protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088797.1 MGP_129S1SvImJ_G0033589.1 mouse_genomes_project 8 45655644 45683627 + MGP_129S1SvImJ_P0088797 Cenpu protein_coding protein_coding MGP_129S1SvImJ_T0088798.1 MGP_129S1SvImJ_G0033589.1 mouse_genomes_project 8 45655645 45659821 + Cenpu protein_coding retained_intron MGP_129S1SvImJ_T0088799.1 MGP_129S1SvImJ_G0033589.1 mouse_genomes_project 8 45655671 45682411 + MGP_129S1SvImJ_P0088799 Cenpu protein_coding protein_coding MGP_129S1SvImJ_T0088800.1 MGP_129S1SvImJ_G0033589.1 mouse_genomes_project 8 45663655 45666030 + Cenpu protein_coding processed_transcript MGP_129S1SvImJ_T0088801.1 MGP_129S1SvImJ_G0033589.1 mouse_genomes_project 8 45665300 45676873 + Cenpu protein_coding retained_intron MGP_129S1SvImJ_T0088802.1 MGP_129S1SvImJ_G0033589.1 mouse_genomes_project 8 45677215 45682421 + Cenpu protein_coding retained_intron MGP_129S1SvImJ_T0005371.1 MGP_129S1SvImJ_G0004552.1 mouse_genomes_project 8 39885343 39898380 + Gm16193 antisense antisense MGP_129S1SvImJ_T0090001.1 MGP_129S1SvImJ_G0033953.1 mouse_genomes_project 8 95457815 95488679 - MGP_129S1SvImJ_P0090001 Bbs2 protein_coding protein_coding MGP_129S1SvImJ_T0090002.1 MGP_129S1SvImJ_G0033953.1 mouse_genomes_project 8 95458005 95460075 - Bbs2 protein_coding processed_transcript MGP_129S1SvImJ_T0090003.1 MGP_129S1SvImJ_G0033953.1 mouse_genomes_project 8 95465006 95469611 - Bbs2 protein_coding processed_transcript MGP_129S1SvImJ_T0098391.1 MGP_129S1SvImJ_G0036476.1 mouse_genomes_project 8 80362980 80363539 - pseudogene pseudogene MGP_129S1SvImJ_T0009173.1 MGP_129S1SvImJ_G0007372.1 mouse_genomes_project 8 95842154 95853405 - 9330175E14Rik lincRNA lincRNA MGP_129S1SvImJ_T0009174.1 MGP_129S1SvImJ_G0007372.1 mouse_genomes_project 8 95849072 95853530 - 9330175E14Rik lincRNA lincRNA MGP_129S1SvImJ_T0009175.1 MGP_129S1SvImJ_G0007372.1 mouse_genomes_project 8 95852374 95854361 - 9330175E14Rik lincRNA lincRNA MGP_129S1SvImJ_T0016009.1 MGP_129S1SvImJ_G0014098.1 mouse_genomes_project 8 96275526 96276325 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0089549.1 MGP_129S1SvImJ_G0033821.1 mouse_genomes_project 8 81722976 81759084 - MGP_129S1SvImJ_P0089549 Usp38 protein_coding protein_coding MGP_129S1SvImJ_T0005412.1 MGP_129S1SvImJ_G0004587.1 mouse_genomes_project 8 117579778 117583382 - Gm16116 antisense antisense MGP_129S1SvImJ_T0090357.1 MGP_129S1SvImJ_G0034092.1 mouse_genomes_project 8 109439456 109454992 + MGP_129S1SvImJ_P0090357 Vps4a protein_coding protein_coding MGP_129S1SvImJ_T0090358.1 MGP_129S1SvImJ_G0034092.1 mouse_genomes_project 8 109447402 109454992 + MGP_129S1SvImJ_P0090358 Vps4a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0090359.1 MGP_129S1SvImJ_G0034092.1 mouse_genomes_project 8 109448250 109451918 + Vps4a protein_coding retained_intron MGP_129S1SvImJ_T0090360.1 MGP_129S1SvImJ_G0034092.1 mouse_genomes_project 8 109451485 109452337 + Vps4a protein_coding retained_intron MGP_129S1SvImJ_T0088315.1 MGP_129S1SvImJ_G0033430.1 mouse_genomes_project 8 19480906 19481882 - MGP_129S1SvImJ_P0088315 protein_coding protein_coding MGP_129S1SvImJ_T0090256.1 MGP_129S1SvImJ_G0034048.1 mouse_genomes_project 8 107806257 107811367 + MGP_129S1SvImJ_P0090256 Hsd11b2 protein_coding protein_coding MGP_129S1SvImJ_T0101387.1 MGP_129S1SvImJ_G0039454.1 mouse_genomes_project 8 57293895 57294009 + Gm25379 snoRNA snoRNA MGP_129S1SvImJ_T0015952.1 MGP_129S1SvImJ_G0014041.1 mouse_genomes_project 8 7980943 7981384 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010998.1 MGP_129S1SvImJ_G0009114.1 mouse_genomes_project 8 73511772 73511852 + Mir28b miRNA miRNA MGP_129S1SvImJ_T0088563.1 MGP_129S1SvImJ_G0033524.1 mouse_genomes_project 8 32056972 32076823 + MGP_129S1SvImJ_P0088563 Ppp2cb protein_coding protein_coding MGP_129S1SvImJ_T0089153.1 MGP_129S1SvImJ_G0033697.1 mouse_genomes_project 8 70494607 70527227 + MGP_129S1SvImJ_P0089153 Sugp2 protein_coding protein_coding MGP_129S1SvImJ_T0089154.1 MGP_129S1SvImJ_G0033697.1 mouse_genomes_project 8 70494685 70502732 + MGP_129S1SvImJ_P0089154 Sugp2 protein_coding protein_coding MGP_129S1SvImJ_T0089155.1 MGP_129S1SvImJ_G0033697.1 mouse_genomes_project 8 70494691 70516622 + Sugp2 protein_coding retained_intron MGP_129S1SvImJ_T0089156.1 MGP_129S1SvImJ_G0033697.1 mouse_genomes_project 8 70496448 70502984 + MGP_129S1SvImJ_P0089156 Sugp2 protein_coding protein_coding MGP_129S1SvImJ_T0089157.1 MGP_129S1SvImJ_G0033697.1 mouse_genomes_project 8 70503664 70520129 + Sugp2 protein_coding retained_intron MGP_129S1SvImJ_T0089158.1 MGP_129S1SvImJ_G0033697.1 mouse_genomes_project 8 70508044 70513723 + Sugp2 protein_coding retained_intron MGP_129S1SvImJ_T0089159.1 MGP_129S1SvImJ_G0033697.1 mouse_genomes_project 8 70513918 70543106 + Sugp2 protein_coding processed_transcript MGP_129S1SvImJ_T0089160.1 MGP_129S1SvImJ_G0033697.1 mouse_genomes_project 8 70519334 70521261 + Sugp2 protein_coding retained_intron MGP_129S1SvImJ_T0089161.1 MGP_129S1SvImJ_G0033697.1 mouse_genomes_project 8 70521606 70524960 + Sugp2 protein_coding processed_transcript MGP_129S1SvImJ_T0089162.1 MGP_129S1SvImJ_G0033697.1 mouse_genomes_project 8 70522296 70524960 + Sugp2 protein_coding retained_intron MGP_129S1SvImJ_T0089163.1 MGP_129S1SvImJ_G0033697.1 mouse_genomes_project 8 70536822 70543105 + Sugp2 protein_coding processed_transcript MGP_129S1SvImJ_T0089627.1 MGP_129S1SvImJ_G0033846.1 mouse_genomes_project 8 84865140 84868421 + MGP_129S1SvImJ_P0089627 1700067K01Rik protein_coding protein_coding MGP_129S1SvImJ_T0089628.1 MGP_129S1SvImJ_G0033846.1 mouse_genomes_project 8 84865342 84868320 + MGP_129S1SvImJ_P0089628 1700067K01Rik protein_coding protein_coding MGP_129S1SvImJ_T0089629.1 MGP_129S1SvImJ_G0033846.1 mouse_genomes_project 8 84865342 84868314 + MGP_129S1SvImJ_P0089629 1700067K01Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089630.1 MGP_129S1SvImJ_G0033846.1 mouse_genomes_project 8 84865983 84866941 + 1700067K01Rik protein_coding retained_intron MGP_129S1SvImJ_T0100139.1 MGP_129S1SvImJ_G0038206.1 mouse_genomes_project 8 113086273 113086380 - Gm23627 snRNA snRNA MGP_129S1SvImJ_T0090440.1 MGP_129S1SvImJ_G0034119.1 mouse_genomes_project 8 112713683 112725233 + MGP_129S1SvImJ_P0090440 Zfp612 protein_coding protein_coding MGP_129S1SvImJ_T0088312.1 MGP_129S1SvImJ_G0033427.1 mouse_genomes_project 8 19091454 19092601 - MGP_129S1SvImJ_P0088312 protein_coding protein_coding MGP_129S1SvImJ_T0088444.1 MGP_129S1SvImJ_G0033480.1 mouse_genomes_project 8 23165685 23212428 - MGP_129S1SvImJ_P0088444 Tacc1 protein_coding protein_coding MGP_129S1SvImJ_T0088445.1 MGP_129S1SvImJ_G0033480.1 mouse_genomes_project 8 23165685 23212428 - MGP_129S1SvImJ_P0088445 Tacc1 protein_coding protein_coding MGP_129S1SvImJ_T0090423.1 MGP_129S1SvImJ_G0034111.1 mouse_genomes_project 8 112282465 112307126 - MGP_129S1SvImJ_P0090423 Ist1 protein_coding protein_coding MGP_129S1SvImJ_T0005428.1 MGP_129S1SvImJ_G0004602.1 mouse_genomes_project 8 129689827 129703399 + A730098A19Rik antisense antisense MGP_129S1SvImJ_T0011017.1 MGP_129S1SvImJ_G0009133.1 mouse_genomes_project 8 87555217 87555342 + Gm44348 miRNA miRNA MGP_129S1SvImJ_T0088291.1 MGP_129S1SvImJ_G0033408.1 mouse_genomes_project 8 16474907 16479736 - MGP_129S1SvImJ_P0088291 Defb37 protein_coding protein_coding MGP_129S1SvImJ_T0015955.1 MGP_129S1SvImJ_G0014044.1 mouse_genomes_project 8 10402716 10403638 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0089994.1 MGP_129S1SvImJ_G0033952.1 mouse_genomes_project 8 95425991 95457783 + MGP_129S1SvImJ_P0089994 Ogfod1 protein_coding protein_coding MGP_129S1SvImJ_T0089995.1 MGP_129S1SvImJ_G0033952.1 mouse_genomes_project 8 95426031 95457783 + MGP_129S1SvImJ_P0089995 Ogfod1 protein_coding protein_coding MGP_129S1SvImJ_T0089996.1 MGP_129S1SvImJ_G0033952.1 mouse_genomes_project 8 95426053 95428245 + Ogfod1 protein_coding retained_intron MGP_129S1SvImJ_T0089997.1 MGP_129S1SvImJ_G0033952.1 mouse_genomes_project 8 95426056 95446498 + Ogfod1 protein_coding processed_transcript MGP_129S1SvImJ_T0089998.1 MGP_129S1SvImJ_G0033952.1 mouse_genomes_project 8 95426084 95457783 + MGP_129S1SvImJ_P0089998 Ogfod1 protein_coding protein_coding MGP_129S1SvImJ_T0089999.1 MGP_129S1SvImJ_G0033952.1 mouse_genomes_project 8 95426089 95444836 + Ogfod1 protein_coding processed_transcript MGP_129S1SvImJ_T0090000.1 MGP_129S1SvImJ_G0033952.1 mouse_genomes_project 8 95443783 95446499 + Ogfod1 protein_coding retained_intron MGP_129S1SvImJ_T0090960.1 MGP_129S1SvImJ_G0034273.1 mouse_genomes_project 8 128266969 128312944 + MGP_129S1SvImJ_P0090960 Capn9 protein_coding protein_coding MGP_129S1SvImJ_T0090961.1 MGP_129S1SvImJ_G0034273.1 mouse_genomes_project 8 128266971 128281033 + MGP_129S1SvImJ_P0090961 Capn9 protein_coding protein_coding MGP_129S1SvImJ_T0090962.1 MGP_129S1SvImJ_G0034273.1 mouse_genomes_project 8 128305580 128308841 + Capn9 protein_coding processed_transcript MGP_129S1SvImJ_T0101409.1 MGP_129S1SvImJ_G0039476.1 mouse_genomes_project 8 97266788 97266921 - Gm26265 snoRNA snoRNA MGP_129S1SvImJ_T0009154.1 MGP_129S1SvImJ_G0007361.1 mouse_genomes_project 8 89093535 89172174 - lincRNA lincRNA MGP_129S1SvImJ_T0090010.1 MGP_129S1SvImJ_G0033959.1 mouse_genomes_project 8 95744293 95781353 + MGP_129S1SvImJ_P0090010 Slc12a3 protein_coding protein_coding MGP_129S1SvImJ_T0088079.1 MGP_129S1SvImJ_G0033344.1 mouse_genomes_project 8 6308570 6904310 - MGP_129S1SvImJ_P0088079 Fam155a protein_coding protein_coding MGP_129S1SvImJ_T0088636.1 MGP_129S1SvImJ_G0033550.1 mouse_genomes_project 8 39075677 39084284 - MGP_129S1SvImJ_P0088636 Fgf20 protein_coding protein_coding MGP_129S1SvImJ_T0088637.1 MGP_129S1SvImJ_G0033550.1 mouse_genomes_project 8 39077118 39110020 - MGP_129S1SvImJ_P0088637 Fgf20 protein_coding protein_coding MGP_129S1SvImJ_T0090108.1 MGP_129S1SvImJ_G0033992.1 mouse_genomes_project 8 97222117 97222984 + Setd6 protein_coding processed_transcript MGP_129S1SvImJ_T0090109.1 MGP_129S1SvImJ_G0033992.1 mouse_genomes_project 8 97222134 97225199 + MGP_129S1SvImJ_P0090109 Setd6 protein_coding protein_coding MGP_129S1SvImJ_T0090110.1 MGP_129S1SvImJ_G0033992.1 mouse_genomes_project 8 97222364 97223440 + Setd6 protein_coding processed_transcript MGP_129S1SvImJ_T0090111.1 MGP_129S1SvImJ_G0033992.1 mouse_genomes_project 8 97222813 97224708 + Setd6 protein_coding processed_transcript MGP_129S1SvImJ_T0090112.1 MGP_129S1SvImJ_G0033992.1 mouse_genomes_project 8 97222822 97224255 + Setd6 protein_coding processed_transcript MGP_129S1SvImJ_T0090113.1 MGP_129S1SvImJ_G0033992.1 mouse_genomes_project 8 97223211 97225060 + Setd6 protein_coding processed_transcript MGP_129S1SvImJ_T0090644.1 MGP_129S1SvImJ_G0034189.1 mouse_genomes_project 8 122965303 122976796 - MGP_129S1SvImJ_P0090644 Kcng4 protein_coding protein_coding MGP_129S1SvImJ_T0090645.1 MGP_129S1SvImJ_G0034189.1 mouse_genomes_project 8 122965303 122977130 - MGP_129S1SvImJ_P0090645 Kcng4 protein_coding protein_coding MGP_129S1SvImJ_T0005392.1 MGP_129S1SvImJ_G0004570.1 mouse_genomes_project 8 81227839 81230471 - 4930505O20Rik antisense antisense MGP_129S1SvImJ_T0090891.1 MGP_129S1SvImJ_G0034250.1 mouse_genomes_project 8 126857369 126872947 + MGP_129S1SvImJ_P0090891 Zfp276 protein_coding protein_coding MGP_129S1SvImJ_T0090892.1 MGP_129S1SvImJ_G0034250.1 mouse_genomes_project 8 126857460 126860826 + Zfp276 protein_coding retained_intron MGP_129S1SvImJ_T0090893.1 MGP_129S1SvImJ_G0034250.1 mouse_genomes_project 8 126857473 126872945 + Zfp276 protein_coding retained_intron MGP_129S1SvImJ_T0090894.1 MGP_129S1SvImJ_G0034250.1 mouse_genomes_project 8 126857875 126868270 + MGP_129S1SvImJ_P0090894 Zfp276 protein_coding protein_coding MGP_129S1SvImJ_T0090895.1 MGP_129S1SvImJ_G0034250.1 mouse_genomes_project 8 126861503 126871324 + Zfp276 protein_coding retained_intron MGP_129S1SvImJ_T0090896.1 MGP_129S1SvImJ_G0034250.1 mouse_genomes_project 8 126862636 126871119 + Zfp276 protein_coding retained_intron MGP_129S1SvImJ_T0090897.1 MGP_129S1SvImJ_G0034250.1 mouse_genomes_project 8 126868020 126868843 + Zfp276 protein_coding retained_intron MGP_129S1SvImJ_T0089475.1 MGP_129S1SvImJ_G0033794.1 mouse_genomes_project 8 75483182 75524102 + MGP_129S1SvImJ_P0089475 Tom1 protein_coding protein_coding MGP_129S1SvImJ_T0089476.1 MGP_129S1SvImJ_G0033794.1 mouse_genomes_project 8 75483182 75524102 + MGP_129S1SvImJ_P0089476 Tom1 protein_coding protein_coding MGP_129S1SvImJ_T0088530.1 MGP_129S1SvImJ_G0033506.1 mouse_genomes_project 8 25457570 25475381 + MGP_129S1SvImJ_P0088530 Eif4ebp1 protein_coding protein_coding MGP_129S1SvImJ_T0100150.1 MGP_129S1SvImJ_G0038217.1 mouse_genomes_project 8 132607854 132607961 + Gm26002 snRNA snRNA MGP_129S1SvImJ_T0089618.1 MGP_129S1SvImJ_G0033842.1 mouse_genomes_project 8 84791921 84815048 - MGP_129S1SvImJ_P0089618 Gm10644 protein_coding protein_coding MGP_129S1SvImJ_T0088607.1 MGP_129S1SvImJ_G0033538.1 mouse_genomes_project 8 34082334 34106460 - MGP_129S1SvImJ_P0088607 Eri1 protein_coding protein_coding MGP_129S1SvImJ_T0009121.1 MGP_129S1SvImJ_G0007337.1 mouse_genomes_project 8 72995126 73007595 + Gm17435 lincRNA lincRNA MGP_129S1SvImJ_T0088314.1 MGP_129S1SvImJ_G0033429.1 mouse_genomes_project 8 19368595 19369737 - MGP_129S1SvImJ_P0088314 protein_coding protein_coding MGP_129S1SvImJ_T0090705.1 MGP_129S1SvImJ_G0034205.1 mouse_genomes_project 8 124108532 124114491 + MGP_129S1SvImJ_P0090705 Cox4i1 protein_coding protein_coding MGP_129S1SvImJ_T0090706.1 MGP_129S1SvImJ_G0034205.1 mouse_genomes_project 8 124108538 124110099 + Cox4i1 protein_coding retained_intron MGP_129S1SvImJ_T0090707.1 MGP_129S1SvImJ_G0034205.1 mouse_genomes_project 8 124108613 124114323 + MGP_129S1SvImJ_P0090707 Cox4i1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090708.1 MGP_129S1SvImJ_G0034205.1 mouse_genomes_project 8 124112867 124114391 + Cox4i1 protein_coding retained_intron MGP_129S1SvImJ_T0090709.1 MGP_129S1SvImJ_G0034205.1 mouse_genomes_project 8 124113429 124114485 + Cox4i1 protein_coding retained_intron MGP_129S1SvImJ_T0015954.1 MGP_129S1SvImJ_G0014043.1 mouse_genomes_project 8 10334512 10334782 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0090277.1 MGP_129S1SvImJ_G0034058.1 mouse_genomes_project 8 108018339 108069968 - MGP_129S1SvImJ_P0090277 Gfod2 protein_coding protein_coding MGP_129S1SvImJ_T0090278.1 MGP_129S1SvImJ_G0034058.1 mouse_genomes_project 8 108021903 108069934 - MGP_129S1SvImJ_P0090278 Gfod2 protein_coding protein_coding MGP_129S1SvImJ_T0090279.1 MGP_129S1SvImJ_G0034058.1 mouse_genomes_project 8 108033156 108069900 - Gfod2 protein_coding processed_transcript MGP_129S1SvImJ_T0090100.1 MGP_129S1SvImJ_G0033991.1 mouse_genomes_project 8 97170286 97213718 + MGP_129S1SvImJ_P0090100 Ndrg4 protein_coding protein_coding MGP_129S1SvImJ_T0090101.1 MGP_129S1SvImJ_G0033991.1 mouse_genomes_project 8 97171376 97221168 + MGP_129S1SvImJ_P0090101 Ndrg4 protein_coding protein_coding MGP_129S1SvImJ_T0090102.1 MGP_129S1SvImJ_G0033991.1 mouse_genomes_project 8 97171391 97221159 + MGP_129S1SvImJ_P0090102 Ndrg4 protein_coding protein_coding MGP_129S1SvImJ_T0090103.1 MGP_129S1SvImJ_G0033991.1 mouse_genomes_project 8 97171548 97221155 + MGP_129S1SvImJ_P0090103 Ndrg4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090104.1 MGP_129S1SvImJ_G0033991.1 mouse_genomes_project 8 97211137 97217347 + Ndrg4 protein_coding processed_transcript MGP_129S1SvImJ_T0090105.1 MGP_129S1SvImJ_G0033991.1 mouse_genomes_project 8 97213683 97217845 + Ndrg4 protein_coding retained_intron MGP_129S1SvImJ_T0090106.1 MGP_129S1SvImJ_G0033991.1 mouse_genomes_project 8 97214480 97220121 + Ndrg4 protein_coding processed_transcript MGP_129S1SvImJ_T0090107.1 MGP_129S1SvImJ_G0033991.1 mouse_genomes_project 8 97218099 97219418 + Ndrg4 protein_coding retained_intron MGP_129S1SvImJ_T0088517.1 MGP_129S1SvImJ_G0033500.1 mouse_genomes_project 8 25219889 25233466 + MGP_129S1SvImJ_P0088517 Prosc protein_coding protein_coding MGP_129S1SvImJ_T0088518.1 MGP_129S1SvImJ_G0033500.1 mouse_genomes_project 8 25219889 25227575 + MGP_129S1SvImJ_P0088518 Prosc protein_coding protein_coding MGP_129S1SvImJ_T0088311.1 MGP_129S1SvImJ_G0033426.1 mouse_genomes_project 8 18854306 18855451 - MGP_129S1SvImJ_P0088311 protein_coding protein_coding MGP_129S1SvImJ_T0088494.1 MGP_129S1SvImJ_G0033491.1 mouse_genomes_project 8 23923113 24013284 + MGP_129S1SvImJ_P0088494 Kcnu1 protein_coding protein_coding MGP_129S1SvImJ_T0088495.1 MGP_129S1SvImJ_G0033491.1 mouse_genomes_project 8 23984690 24013285 + MGP_129S1SvImJ_P0088495 Kcnu1 protein_coding protein_coding MGP_129S1SvImJ_T0088496.1 MGP_129S1SvImJ_G0033491.1 mouse_genomes_project 8 23984702 23994667 + MGP_129S1SvImJ_P0088496 Kcnu1 protein_coding protein_coding MGP_129S1SvImJ_T0015992.1 MGP_129S1SvImJ_G0014081.1 mouse_genomes_project 8 74264797 74265280 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015966.1 MGP_129S1SvImJ_G0014055.1 mouse_genomes_project 8 18643600 18644723 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0089480.1 MGP_129S1SvImJ_G0033796.1 mouse_genomes_project 8 75569704 75588641 + MGP_129S1SvImJ_P0089480 Mcm5 protein_coding protein_coding MGP_129S1SvImJ_T0090145.1 MGP_129S1SvImJ_G0034006.1 mouse_genomes_project 8 106451506 106451727 + MGP_129S1SvImJ_P0090145 Gm11020 protein_coding protein_coding MGP_129S1SvImJ_T0098390.1 MGP_129S1SvImJ_G0036475.1 mouse_genomes_project 8 75875065 75875607 + pseudogene pseudogene MGP_129S1SvImJ_T0016011.1 MGP_129S1SvImJ_G0014100.1 mouse_genomes_project 8 99173844 99174834 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009172.1 MGP_129S1SvImJ_G0007371.1 mouse_genomes_project 8 95798542 95800244 + Gm15889 lincRNA lincRNA MGP_129S1SvImJ_T0098392.1 MGP_129S1SvImJ_G0036477.1 mouse_genomes_project 8 89196523 89196954 - pseudogene pseudogene MGP_129S1SvImJ_T0089116.1 MGP_129S1SvImJ_G0033690.1 mouse_genomes_project 8 70379250 70387870 - MGP_129S1SvImJ_P0089116 Rfxank protein_coding protein_coding MGP_129S1SvImJ_T0089118.1 MGP_129S1SvImJ_G0033690.1 mouse_genomes_project 8 70382027 70387895 - MGP_129S1SvImJ_P0089118 Rfxank protein_coding unknown_likely_coding MGP_129S1SvImJ_T0009120.1 MGP_129S1SvImJ_G0007336.1 mouse_genomes_project 8 72616891 72620327 - Gm26586 lincRNA lincRNA MGP_129S1SvImJ_T0088081.1 MGP_129S1SvImJ_G0033346.1 mouse_genomes_project 8 7107933 7114629 - MGP_129S1SvImJ_P0088081 Lig4 protein_coding protein_coding MGP_129S1SvImJ_T0101423.1 MGP_129S1SvImJ_G0039490.1 mouse_genomes_project 8 132733516 132733643 + Gm26100 snoRNA snoRNA MGP_129S1SvImJ_T0087992.1 MGP_129S1SvImJ_G0033316.1 mouse_genomes_project 8 628706 644073 - MGP_129S1SvImJ_P0087992 Fcer2a protein_coding protein_coding MGP_129S1SvImJ_T0089056.1 MGP_129S1SvImJ_G0033667.1 mouse_genomes_project 8 69367309 69392645 + MGP_129S1SvImJ_P0089056 Zfp930 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089057.1 MGP_129S1SvImJ_G0033667.1 mouse_genomes_project 8 69388441 69391079 + MGP_129S1SvImJ_P0089057 Zfp930 protein_coding protein_coding MGP_129S1SvImJ_T0090546.1 MGP_129S1SvImJ_G0034152.1 mouse_genomes_project 8 114834233 114852140 - MGP_129S1SvImJ_P0090546 Kars protein_coding protein_coding MGP_129S1SvImJ_T0090547.1 MGP_129S1SvImJ_G0034152.1 mouse_genomes_project 8 114834237 114852175 - MGP_129S1SvImJ_P0090547 Kars protein_coding protein_coding MGP_129S1SvImJ_T0090548.1 MGP_129S1SvImJ_G0034152.1 mouse_genomes_project 8 114834237 114852118 - MGP_129S1SvImJ_P0090548 Kars protein_coding protein_coding MGP_129S1SvImJ_T0016010.1 MGP_129S1SvImJ_G0014099.1 mouse_genomes_project 8 97065111 97066549 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0090590.1 MGP_129S1SvImJ_G0034166.1 mouse_genomes_project 8 120041573 120061337 + MGP_129S1SvImJ_P0090590 Cenpn protein_coding protein_coding MGP_129S1SvImJ_T0090608.1 MGP_129S1SvImJ_G0034176.1 mouse_genomes_project 8 120911989 120982095 + MGP_129S1SvImJ_P0090608 Hsd17b2 protein_coding protein_coding MGP_129S1SvImJ_T0005355.1 MGP_129S1SvImJ_G0004540.1 mouse_genomes_project 8 10390797 10397454 + Gm17023 antisense antisense MGP_129S1SvImJ_T0090610.1 MGP_129S1SvImJ_G0034178.1 mouse_genomes_project 8 121532476 122627771 + MGP_129S1SvImJ_P0090610 Cdh13 protein_coding protein_coding MGP_129S1SvImJ_T0090611.1 MGP_129S1SvImJ_G0034178.1 mouse_genomes_project 8 121532498 122128094 + Cdh13 protein_coding retained_intron MGP_129S1SvImJ_T0090612.1 MGP_129S1SvImJ_G0034178.1 mouse_genomes_project 8 121532518 122250984 + Cdh13 protein_coding retained_intron MGP_129S1SvImJ_T0090613.1 MGP_129S1SvImJ_G0034178.1 mouse_genomes_project 8 121532539 122026534 + Cdh13 protein_coding retained_intron MGP_129S1SvImJ_T0090614.1 MGP_129S1SvImJ_G0034178.1 mouse_genomes_project 8 121532540 122492332 + Cdh13 protein_coding retained_intron MGP_129S1SvImJ_T0090615.1 MGP_129S1SvImJ_G0034178.1 mouse_genomes_project 8 121563157 122132561 + Cdh13 protein_coding processed_transcript MGP_129S1SvImJ_T0090616.1 MGP_129S1SvImJ_G0034178.1 mouse_genomes_project 8 122576535 122615908 + Cdh13 protein_coding processed_transcript MGP_129S1SvImJ_T0090694.1 MGP_129S1SvImJ_G0034202.1 mouse_genomes_project 8 124043061 124073457 - MGP_129S1SvImJ_P0090694 1190005I06Rik protein_coding protein_coding MGP_129S1SvImJ_T0090696.1 MGP_129S1SvImJ_G0034202.1 mouse_genomes_project 8 124043260 124087884 - MGP_129S1SvImJ_P0090696 1190005I06Rik protein_coding protein_coding MGP_129S1SvImJ_T0090697.1 MGP_129S1SvImJ_G0034202.1 mouse_genomes_project 8 124043394 124073328 - MGP_129S1SvImJ_P0090697 1190005I06Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0015964.1 MGP_129S1SvImJ_G0014053.1 mouse_genomes_project 8 18628844 18629989 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0089028.1 MGP_129S1SvImJ_G0033662.1 mouse_genomes_project 8 68921640 68957011 + MGP_129S1SvImJ_P0089028 Ints10 protein_coding protein_coding MGP_129S1SvImJ_T0089029.1 MGP_129S1SvImJ_G0033662.1 mouse_genomes_project 8 68921646 68950146 + MGP_129S1SvImJ_P0089029 Ints10 protein_coding protein_coding MGP_129S1SvImJ_T0089030.1 MGP_129S1SvImJ_G0033662.1 mouse_genomes_project 8 68921667 68926420 + Ints10 protein_coding retained_intron MGP_129S1SvImJ_T0089031.1 MGP_129S1SvImJ_G0033662.1 mouse_genomes_project 8 68921667 68957009 + MGP_129S1SvImJ_P0089031 Ints10 protein_coding protein_coding MGP_129S1SvImJ_T0089032.1 MGP_129S1SvImJ_G0033662.1 mouse_genomes_project 8 68921685 68926420 + Ints10 protein_coding retained_intron MGP_129S1SvImJ_T0089033.1 MGP_129S1SvImJ_G0033662.1 mouse_genomes_project 8 68921726 68957009 + MGP_129S1SvImJ_P0089033 Ints10 protein_coding protein_coding MGP_129S1SvImJ_T0089034.1 MGP_129S1SvImJ_G0033662.1 mouse_genomes_project 8 68939482 68942130 + Ints10 protein_coding retained_intron MGP_129S1SvImJ_T0089035.1 MGP_129S1SvImJ_G0033662.1 mouse_genomes_project 8 68948520 68955119 + MGP_129S1SvImJ_P0089035 Ints10 protein_coding protein_coding MGP_129S1SvImJ_T0090974.1 MGP_129S1SvImJ_G0034276.1 mouse_genomes_project 8 128426425 128438265 + MGP_129S1SvImJ_P0090974 Arv1 protein_coding protein_coding MGP_129S1SvImJ_T0087953.1 MGP_129S1SvImJ_G0033306.1 mouse_genomes_project 8 436130 464891 + MGP_129S1SvImJ_P0087953 Pnpla6 protein_coding protein_coding MGP_129S1SvImJ_T0087954.1 MGP_129S1SvImJ_G0033306.1 mouse_genomes_project 8 436130 464891 + MGP_129S1SvImJ_P0087954 Pnpla6 protein_coding protein_coding MGP_129S1SvImJ_T0088876.1 MGP_129S1SvImJ_G0033616.1 mouse_genomes_project 8 55546271 55588557 - MGP_129S1SvImJ_P0088876 Adam29 protein_coding protein_coding MGP_129S1SvImJ_T0088512.1 MGP_129S1SvImJ_G0033497.1 mouse_genomes_project 8 24255870 24260599 + MGP_129S1SvImJ_P0088512 Thap1 protein_coding protein_coding MGP_129S1SvImJ_T0088513.1 MGP_129S1SvImJ_G0033497.1 mouse_genomes_project 8 24255913 24257071 + Thap1 protein_coding retained_intron MGP_129S1SvImJ_T0088880.1 MGP_129S1SvImJ_G0033619.1 mouse_genomes_project 8 56236902 56265042 - MGP_129S1SvImJ_P0088880 Cep44 protein_coding protein_coding MGP_129S1SvImJ_T0088881.1 MGP_129S1SvImJ_G0033619.1 mouse_genomes_project 8 56236902 56252226 - MGP_129S1SvImJ_P0088881 Cep44 protein_coding protein_coding MGP_129S1SvImJ_T0088882.1 MGP_129S1SvImJ_G0033619.1 mouse_genomes_project 8 56249667 56265028 - MGP_129S1SvImJ_P0088882 Cep44 protein_coding protein_coding MGP_129S1SvImJ_T0088883.1 MGP_129S1SvImJ_G0033619.1 mouse_genomes_project 8 56250954 56264984 - MGP_129S1SvImJ_P0088883 Cep44 protein_coding protein_coding MGP_129S1SvImJ_T0088884.1 MGP_129S1SvImJ_G0033619.1 mouse_genomes_project 8 56251021 56265057 - MGP_129S1SvImJ_P0088884 Cep44 protein_coding protein_coding MGP_129S1SvImJ_T0088885.1 MGP_129S1SvImJ_G0033619.1 mouse_genomes_project 8 56252212 56265232 - MGP_129S1SvImJ_P0088885 Cep44 protein_coding protein_coding MGP_129S1SvImJ_T0088886.1 MGP_129S1SvImJ_G0033619.1 mouse_genomes_project 8 56263165 56264442 - Cep44 protein_coding processed_transcript MGP_129S1SvImJ_T0088887.1 MGP_129S1SvImJ_G0033619.1 mouse_genomes_project 8 56263513 56264988 - Cep44 protein_coding processed_transcript MGP_129S1SvImJ_T0100142.1 MGP_129S1SvImJ_G0038209.1 mouse_genomes_project 8 116461999 116462161 - Gm24291 snRNA snRNA MGP_129S1SvImJ_T0089961.1 MGP_129S1SvImJ_G0033943.1 mouse_genomes_project 8 94534335 94568459 - MGP_129S1SvImJ_P0089961 Ces1d protein_coding protein_coding MGP_129S1SvImJ_T0089962.1 MGP_129S1SvImJ_G0033943.1 mouse_genomes_project 8 94534570 94538675 - Ces1d protein_coding processed_transcript MGP_129S1SvImJ_T0089963.1 MGP_129S1SvImJ_G0033943.1 mouse_genomes_project 8 94534596 94543995 - Ces1d protein_coding processed_transcript MGP_129S1SvImJ_T0089964.1 MGP_129S1SvImJ_G0033943.1 mouse_genomes_project 8 94565425 94568398 - Ces1d protein_coding processed_transcript MGP_129S1SvImJ_T0089864.1 MGP_129S1SvImJ_G0033911.1 mouse_genomes_project 8 87823636 87870223 - MGP_129S1SvImJ_P0089864 N4bp1 protein_coding protein_coding MGP_129S1SvImJ_T0090582.1 MGP_129S1SvImJ_G0034163.1 mouse_genomes_project 8 119594389 119605279 + MGP_129S1SvImJ_P0090582 Dynlrb2 protein_coding protein_coding MGP_129S1SvImJ_T0088523.1 MGP_129S1SvImJ_G0033502.1 mouse_genomes_project 8 25311450 25316251 - MGP_129S1SvImJ_P0088523 Brf2 protein_coding protein_coding MGP_129S1SvImJ_T0090945.1 MGP_129S1SvImJ_G0034269.1 mouse_genomes_project 8 127902230 128021595 + MGP_129S1SvImJ_P0090945 Galnt2 protein_coding protein_coding MGP_129S1SvImJ_T0090946.1 MGP_129S1SvImJ_G0034269.1 mouse_genomes_project 8 127902347 128007890 + Galnt2 protein_coding processed_transcript MGP_129S1SvImJ_T0090947.1 MGP_129S1SvImJ_G0034269.1 mouse_genomes_project 8 127967863 127996484 + Galnt2 protein_coding processed_transcript MGP_129S1SvImJ_T0090948.1 MGP_129S1SvImJ_G0034269.1 mouse_genomes_project 8 127968126 128021597 + Galnt2 protein_coding processed_transcript MGP_129S1SvImJ_T0090584.1 MGP_129S1SvImJ_G0034165.1 mouse_genomes_project 8 120010878 120016718 - Cmc2 protein_coding retained_intron MGP_129S1SvImJ_T0090585.1 MGP_129S1SvImJ_G0034165.1 mouse_genomes_project 8 120010878 120041289 - MGP_129S1SvImJ_P0090585 Cmc2 protein_coding protein_coding MGP_129S1SvImJ_T0090586.1 MGP_129S1SvImJ_G0034165.1 mouse_genomes_project 8 120011472 120041256 - MGP_129S1SvImJ_P0090586 Cmc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090587.1 MGP_129S1SvImJ_G0034165.1 mouse_genomes_project 8 120011726 120041273 - MGP_129S1SvImJ_P0090587 Cmc2 protein_coding protein_coding MGP_129S1SvImJ_T0090588.1 MGP_129S1SvImJ_G0034165.1 mouse_genomes_project 8 120011808 120041280 - Cmc2 protein_coding processed_transcript MGP_129S1SvImJ_T0090589.1 MGP_129S1SvImJ_G0034165.1 mouse_genomes_project 8 120011825 120041199 - MGP_129S1SvImJ_P0090589 Cmc2 protein_coding protein_coding MGP_129S1SvImJ_T0090447.1 MGP_129S1SvImJ_G0034125.1 mouse_genomes_project 8 113297637 113399468 + MGP_129S1SvImJ_P0090447 Vac14 protein_coding protein_coding MGP_129S1SvImJ_T0100131.1 MGP_129S1SvImJ_G0038198.1 mouse_genomes_project 8 90734951 90735058 - Gm26331 snRNA snRNA MGP_129S1SvImJ_T0011021.1 MGP_129S1SvImJ_G0009137.1 mouse_genomes_project 8 95739408 95739479 + Mir138-2 miRNA miRNA MGP_129S1SvImJ_T0090147.1 MGP_129S1SvImJ_G0034008.1 mouse_genomes_project 8 106469448 106478072 + MGP_129S1SvImJ_P0090147 Cmtm3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0088551.1 MGP_129S1SvImJ_G0033518.1 mouse_genomes_project 8 30231842 30339757 - MGP_129S1SvImJ_P0088551 Nrg1 protein_coding protein_coding MGP_129S1SvImJ_T0011027.1 MGP_129S1SvImJ_G0009143.1 mouse_genomes_project 8 107573954 107574063 - Gm27320 miRNA miRNA MGP_129S1SvImJ_T0090604.1 MGP_129S1SvImJ_G0034174.1 mouse_genomes_project 8 120682130 120842264 + MGP_129S1SvImJ_P0090604 Plcg2 protein_coding protein_coding MGP_129S1SvImJ_T0087932.1 MGP_129S1SvImJ_G0033300.1 mouse_genomes_project 8 254732 290394 + MGP_129S1SvImJ_P0087932 A430078G23Rik protein_coding protein_coding MGP_129S1SvImJ_T0088071.1 MGP_129S1SvImJ_G0033337.1 mouse_genomes_project 8 1685923 1686751 - MGP_129S1SvImJ_P0088071 protein_coding protein_coding MGP_129S1SvImJ_T0090345.1 MGP_129S1SvImJ_G0034087.1 mouse_genomes_project 8 109264029 109276614 + MGP_129S1SvImJ_P0090345 Has3 protein_coding protein_coding MGP_129S1SvImJ_T0090346.1 MGP_129S1SvImJ_G0034087.1 mouse_genomes_project 8 109264623 109274987 + MGP_129S1SvImJ_P0090346 Has3 protein_coding protein_coding MGP_129S1SvImJ_T0090347.1 MGP_129S1SvImJ_G0034087.1 mouse_genomes_project 8 109264678 109278280 + MGP_129S1SvImJ_P0090347 Has3 protein_coding protein_coding MGP_129S1SvImJ_T0091000.1 MGP_129S1SvImJ_G0034287.1 mouse_genomes_project 8 129452232 129455774 + MGP_129S1SvImJ_P0091000 Map10 protein_coding protein_coding MGP_129S1SvImJ_T0088815.1 MGP_129S1SvImJ_G0033594.1 mouse_genomes_project 8 46326147 46507469 - MGP_129S1SvImJ_P0088815 Stox2 protein_coding protein_coding MGP_129S1SvImJ_T0088816.1 MGP_129S1SvImJ_G0033594.1 mouse_genomes_project 8 46326147 46441174 - MGP_129S1SvImJ_P0088816 Stox2 protein_coding protein_coding MGP_129S1SvImJ_T0090328.1 MGP_129S1SvImJ_G0034078.1 mouse_genomes_project 8 108516119 108551490 + MGP_129S1SvImJ_P0090328 Slc7a6 protein_coding protein_coding MGP_129S1SvImJ_T0088638.1 MGP_129S1SvImJ_G0033551.1 mouse_genomes_project 8 39109150 39183017 + MGP_129S1SvImJ_P0088638 Micu3 protein_coding protein_coding MGP_129S1SvImJ_T0088639.1 MGP_129S1SvImJ_G0033551.1 mouse_genomes_project 8 39109850 39183599 + MGP_129S1SvImJ_P0088639 Micu3 protein_coding protein_coding MGP_129S1SvImJ_T0088640.1 MGP_129S1SvImJ_G0033551.1 mouse_genomes_project 8 39161813 39173958 + Micu3 protein_coding retained_intron MGP_129S1SvImJ_T0089783.1 MGP_129S1SvImJ_G0033888.1 mouse_genomes_project 8 85972724 85976165 + MGP_129S1SvImJ_P0089783 2310036O22Rik protein_coding protein_coding MGP_129S1SvImJ_T0089368.1 MGP_129S1SvImJ_G0033759.1 mouse_genomes_project 8 72037714 72084743 - MGP_129S1SvImJ_P0089368 Unc13a protein_coding protein_coding MGP_129S1SvImJ_T0089369.1 MGP_129S1SvImJ_G0033759.1 mouse_genomes_project 8 72042369 72084722 - MGP_129S1SvImJ_P0089369 Unc13a protein_coding protein_coding MGP_129S1SvImJ_T0089370.1 MGP_129S1SvImJ_G0033759.1 mouse_genomes_project 8 72047735 72054363 - MGP_129S1SvImJ_P0089370 Unc13a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089371.1 MGP_129S1SvImJ_G0033759.1 mouse_genomes_project 8 72048000 72055534 - Unc13a protein_coding retained_intron MGP_129S1SvImJ_T0089372.1 MGP_129S1SvImJ_G0033759.1 mouse_genomes_project 8 72054425 72058895 - MGP_129S1SvImJ_P0089372 Unc13a protein_coding protein_coding MGP_129S1SvImJ_T0089373.1 MGP_129S1SvImJ_G0033759.1 mouse_genomes_project 8 72055963 72084633 - MGP_129S1SvImJ_P0089373 Unc13a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089374.1 MGP_129S1SvImJ_G0033759.1 mouse_genomes_project 8 72066567 72071463 - MGP_129S1SvImJ_P0089374 Unc13a protein_coding protein_coding MGP_129S1SvImJ_T0089375.1 MGP_129S1SvImJ_G0033759.1 mouse_genomes_project 8 72073331 72084727 - Unc13a protein_coding retained_intron MGP_129S1SvImJ_T0089376.1 MGP_129S1SvImJ_G0033759.1 mouse_genomes_project 8 72073336 72081072 - Unc13a protein_coding retained_intron MGP_129S1SvImJ_T0091019.1 MGP_129S1SvImJ_G0034294.1 mouse_genomes_project 8 130248834 130251766 + MGP_129S1SvImJ_P0091019 Coa6 protein_coding protein_coding MGP_129S1SvImJ_T0089719.1 MGP_129S1SvImJ_G0033871.1 mouse_genomes_project 8 85755111 85759074 + MGP_129S1SvImJ_P0089719 Gadd45gip1 protein_coding protein_coding MGP_129S1SvImJ_T0089599.1 MGP_129S1SvImJ_G0033839.1 mouse_genomes_project 8 84559916 84568051 + MGP_129S1SvImJ_P0089599 Ddx39 protein_coding protein_coding MGP_129S1SvImJ_T0089600.1 MGP_129S1SvImJ_G0033839.1 mouse_genomes_project 8 84560007 84567977 + Ddx39 protein_coding retained_intron MGP_129S1SvImJ_T0089601.1 MGP_129S1SvImJ_G0033839.1 mouse_genomes_project 8 84560007 84567978 + MGP_129S1SvImJ_P0089601 Ddx39 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089602.1 MGP_129S1SvImJ_G0033839.1 mouse_genomes_project 8 84560011 84572795 + MGP_129S1SvImJ_P0089602 Ddx39 protein_coding protein_coding MGP_129S1SvImJ_T0089603.1 MGP_129S1SvImJ_G0033839.1 mouse_genomes_project 8 84560287 84568051 + MGP_129S1SvImJ_P0089603 Ddx39 protein_coding protein_coding MGP_129S1SvImJ_T0089604.1 MGP_129S1SvImJ_G0033839.1 mouse_genomes_project 8 84564319 84565997 + Ddx39 protein_coding retained_intron MGP_129S1SvImJ_T0088770.1 MGP_129S1SvImJ_G0033584.1 mouse_genomes_project 8 45121925 45218612 - MGP_129S1SvImJ_P0088770 Snx25 protein_coding protein_coding MGP_129S1SvImJ_T0088771.1 MGP_129S1SvImJ_G0033584.1 mouse_genomes_project 8 45121925 45244563 - MGP_129S1SvImJ_P0088771 Snx25 protein_coding protein_coding MGP_129S1SvImJ_T0088772.1 MGP_129S1SvImJ_G0033584.1 mouse_genomes_project 8 45121930 45243557 - MGP_129S1SvImJ_P0088772 Snx25 protein_coding protein_coding MGP_129S1SvImJ_T0088773.1 MGP_129S1SvImJ_G0033584.1 mouse_genomes_project 8 45121936 45211210 - Snx25 protein_coding retained_intron MGP_129S1SvImJ_T0088774.1 MGP_129S1SvImJ_G0033584.1 mouse_genomes_project 8 45122117 45173313 - MGP_129S1SvImJ_P0088774 Snx25 protein_coding protein_coding MGP_129S1SvImJ_T0088775.1 MGP_129S1SvImJ_G0033584.1 mouse_genomes_project 8 45138061 45145110 - Snx25 protein_coding processed_transcript MGP_129S1SvImJ_T0088776.1 MGP_129S1SvImJ_G0033584.1 mouse_genomes_project 8 45144733 45218599 - MGP_129S1SvImJ_P0088776 Snx25 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088777.1 MGP_129S1SvImJ_G0033584.1 mouse_genomes_project 8 45144777 45183834 - Snx25 protein_coding processed_transcript MGP_129S1SvImJ_T0088778.1 MGP_129S1SvImJ_G0033584.1 mouse_genomes_project 8 45172870 45199943 - Snx25 protein_coding retained_intron MGP_129S1SvImJ_T0088336.1 MGP_129S1SvImJ_G0033445.1 mouse_genomes_project 8 19968816 20010176 - MGP_129S1SvImJ_P0088336 Nek3 protein_coding protein_coding MGP_129S1SvImJ_T0088337.1 MGP_129S1SvImJ_G0033445.1 mouse_genomes_project 8 19968816 20010199 - MGP_129S1SvImJ_P0088337 Nek3 protein_coding protein_coding MGP_129S1SvImJ_T0088338.1 MGP_129S1SvImJ_G0033445.1 mouse_genomes_project 8 19968819 20006151 - MGP_129S1SvImJ_P0088338 Nek3 protein_coding protein_coding MGP_129S1SvImJ_T0088339.1 MGP_129S1SvImJ_G0033445.1 mouse_genomes_project 8 19969219 19972837 - Nek3 protein_coding retained_intron MGP_129S1SvImJ_T0090876.1 MGP_129S1SvImJ_G0034248.1 mouse_genomes_project 8 126833679 126837631 - MGP_129S1SvImJ_P0090876 Spata2l protein_coding protein_coding MGP_129S1SvImJ_T0090877.1 MGP_129S1SvImJ_G0034248.1 mouse_genomes_project 8 126833682 126837634 - MGP_129S1SvImJ_P0090877 Spata2l protein_coding protein_coding MGP_129S1SvImJ_T0005380.1 MGP_129S1SvImJ_G0004560.1 mouse_genomes_project 8 61013619 61098771 - Gm16178 antisense antisense MGP_129S1SvImJ_T0089327.1 MGP_129S1SvImJ_G0033747.1 mouse_genomes_project 8 71864616 71867672 + Dda1 protein_coding processed_transcript MGP_129S1SvImJ_T0089328.1 MGP_129S1SvImJ_G0033747.1 mouse_genomes_project 8 71864616 71871525 + Dda1 protein_coding processed_transcript MGP_129S1SvImJ_T0089329.1 MGP_129S1SvImJ_G0033747.1 mouse_genomes_project 8 71864616 71867801 + Dda1 protein_coding retained_intron MGP_129S1SvImJ_T0089330.1 MGP_129S1SvImJ_G0033747.1 mouse_genomes_project 8 71864616 71871525 + Dda1 protein_coding processed_transcript MGP_129S1SvImJ_T0089331.1 MGP_129S1SvImJ_G0033747.1 mouse_genomes_project 8 71864616 71871525 + MGP_129S1SvImJ_P0089331 Dda1 protein_coding protein_coding MGP_129S1SvImJ_T0089332.1 MGP_129S1SvImJ_G0033747.1 mouse_genomes_project 8 71864616 71871525 + MGP_129S1SvImJ_P0089332 Dda1 protein_coding protein_coding MGP_129S1SvImJ_T0089333.1 MGP_129S1SvImJ_G0033747.1 mouse_genomes_project 8 71864622 71871525 + MGP_129S1SvImJ_P0089333 Dda1 protein_coding protein_coding MGP_129S1SvImJ_T0089334.1 MGP_129S1SvImJ_G0033747.1 mouse_genomes_project 8 71864628 71868208 + Dda1 protein_coding retained_intron MGP_129S1SvImJ_T0089335.1 MGP_129S1SvImJ_G0033747.1 mouse_genomes_project 8 71864628 71870401 + Dda1 protein_coding retained_intron MGP_129S1SvImJ_T0089336.1 MGP_129S1SvImJ_G0033747.1 mouse_genomes_project 8 71864702 71868041 + Dda1 protein_coding retained_intron MGP_129S1SvImJ_T0089337.1 MGP_129S1SvImJ_G0033747.1 mouse_genomes_project 8 71865827 71871525 + Dda1 protein_coding processed_transcript MGP_129S1SvImJ_T0089008.1 MGP_129S1SvImJ_G0033657.1 mouse_genomes_project 8 67590093 67597803 + MGP_129S1SvImJ_P0089008 Nat2 protein_coding protein_coding MGP_129S1SvImJ_T0089009.1 MGP_129S1SvImJ_G0033657.1 mouse_genomes_project 8 67590174 67597807 + MGP_129S1SvImJ_P0089009 Nat2 protein_coding protein_coding MGP_129S1SvImJ_T0100130.1 MGP_129S1SvImJ_G0038197.1 mouse_genomes_project 8 87650545 87650653 - Gm22305 snRNA snRNA MGP_129S1SvImJ_T0011750.1 MGP_129S1SvImJ_G0009866.1 mouse_genomes_project 8 124164526 124164781 - Gm24239 misc_RNA misc_RNA MGP_129S1SvImJ_T0090635.1 MGP_129S1SvImJ_G0034185.1 mouse_genomes_project 8 122891892 122907426 - MGP_129S1SvImJ_P0090635 Hsdl1 protein_coding protein_coding MGP_129S1SvImJ_T0089663.1 MGP_129S1SvImJ_G0033862.1 mouse_genomes_project 8 85138720 85151023 - MGP_129S1SvImJ_P0089663 Ccdc130 protein_coding protein_coding MGP_129S1SvImJ_T0089664.1 MGP_129S1SvImJ_G0033862.1 mouse_genomes_project 8 85138729 85142333 - Ccdc130 protein_coding retained_intron MGP_129S1SvImJ_T0089665.1 MGP_129S1SvImJ_G0033862.1 mouse_genomes_project 8 85139541 85147246 - MGP_129S1SvImJ_P0089665 Ccdc130 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089666.1 MGP_129S1SvImJ_G0033862.1 mouse_genomes_project 8 85140822 85142572 - Ccdc130 protein_coding retained_intron MGP_129S1SvImJ_T0089667.1 MGP_129S1SvImJ_G0033862.1 mouse_genomes_project 8 85144333 85150785 - MGP_129S1SvImJ_P0089667 Ccdc130 protein_coding protein_coding MGP_129S1SvImJ_T0089668.1 MGP_129S1SvImJ_G0033862.1 mouse_genomes_project 8 85144608 85150782 - Ccdc130 protein_coding retained_intron MGP_129S1SvImJ_T0010978.1 MGP_129S1SvImJ_G0009094.1 mouse_genomes_project 8 21040304 21040394 - Mir3107 miRNA miRNA MGP_129S1SvImJ_T0089294.1 MGP_129S1SvImJ_G0033739.1 mouse_genomes_project 8 71756298 71759171 + MGP_129S1SvImJ_P0089294 Use1 protein_coding protein_coding MGP_129S1SvImJ_T0089295.1 MGP_129S1SvImJ_G0033739.1 mouse_genomes_project 8 71756392 71759174 + MGP_129S1SvImJ_P0089295 Use1 protein_coding protein_coding MGP_129S1SvImJ_T0089296.1 MGP_129S1SvImJ_G0033739.1 mouse_genomes_project 8 71756455 71757257 + MGP_129S1SvImJ_P0089296 Use1 protein_coding protein_coding MGP_129S1SvImJ_T0089297.1 MGP_129S1SvImJ_G0033739.1 mouse_genomes_project 8 71756667 71759174 + Use1 protein_coding retained_intron MGP_129S1SvImJ_T0089298.1 MGP_129S1SvImJ_G0033739.1 mouse_genomes_project 8 71756667 71759174 + Use1 protein_coding retained_intron MGP_129S1SvImJ_T0089299.1 MGP_129S1SvImJ_G0033739.1 mouse_genomes_project 8 71756667 71759174 + MGP_129S1SvImJ_P0089299 Use1 protein_coding protein_coding MGP_129S1SvImJ_T0089300.1 MGP_129S1SvImJ_G0033739.1 mouse_genomes_project 8 71756693 71758273 + Use1 protein_coding retained_intron MGP_129S1SvImJ_T0089301.1 MGP_129S1SvImJ_G0033739.1 mouse_genomes_project 8 71756693 71758440 + Use1 protein_coding retained_intron MGP_129S1SvImJ_T0089302.1 MGP_129S1SvImJ_G0033739.1 mouse_genomes_project 8 71756834 71758127 + Use1 protein_coding retained_intron MGP_129S1SvImJ_T0089303.1 MGP_129S1SvImJ_G0033739.1 mouse_genomes_project 8 71757091 71757664 + Use1 protein_coding retained_intron MGP_129S1SvImJ_T0089304.1 MGP_129S1SvImJ_G0033739.1 mouse_genomes_project 8 71757230 71759174 + Use1 protein_coding retained_intron MGP_129S1SvImJ_T0089305.1 MGP_129S1SvImJ_G0033739.1 mouse_genomes_project 8 71758233 71759113 + Use1 protein_coding retained_intron MGP_129S1SvImJ_T0090339.1 MGP_129S1SvImJ_G0034083.1 mouse_genomes_project 8 108842985 108850638 + MGP_129S1SvImJ_P0090339 6030452D12Rik protein_coding protein_coding MGP_129S1SvImJ_T0088574.1 MGP_129S1SvImJ_G0033528.1 mouse_genomes_project 8 32204466 32209947 - MGP_129S1SvImJ_P0088574 Smim18 protein_coding protein_coding MGP_129S1SvImJ_T0090273.1 MGP_129S1SvImJ_G0034055.1 mouse_genomes_project 8 108003918 108006797 + MGP_129S1SvImJ_P0090273 Pard6a protein_coding protein_coding MGP_129S1SvImJ_T0090274.1 MGP_129S1SvImJ_G0034055.1 mouse_genomes_project 8 108004950 108006796 + MGP_129S1SvImJ_P0090274 Pard6a protein_coding protein_coding MGP_129S1SvImJ_T0089115.1 MGP_129S1SvImJ_G0033689.1 mouse_genomes_project 8 70341836 70369272 - MGP_129S1SvImJ_P0089115 Ncan protein_coding protein_coding MGP_129S1SvImJ_T0009093.1 MGP_129S1SvImJ_G0007313.1 mouse_genomes_project 8 30433334 30441854 + Gm26578 lincRNA lincRNA MGP_129S1SvImJ_T0090643.1 MGP_129S1SvImJ_G0034188.1 mouse_genomes_project 8 122951709 122958392 + MGP_129S1SvImJ_P0090643 Adad2 protein_coding protein_coding MGP_129S1SvImJ_T0015989.1 MGP_129S1SvImJ_G0014078.1 mouse_genomes_project 8 66658824 66659121 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0090908.1 MGP_129S1SvImJ_G0034252.1 mouse_genomes_project 8 126943264 126981247 + MGP_129S1SvImJ_P0090908 Spire2 protein_coding protein_coding MGP_129S1SvImJ_T0015977.1 MGP_129S1SvImJ_G0014066.1 mouse_genomes_project 8 35022070 35023115 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102836.1 MGP_129S1SvImJ_G0040668.1 mouse_genomes_project 8 101379839 101381228 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0009078.1 MGP_129S1SvImJ_G0007302.1 mouse_genomes_project 8 9564693 9565095 + Gm29175 lincRNA lincRNA MGP_129S1SvImJ_T0089318.1 MGP_129S1SvImJ_G0033742.1 mouse_genomes_project 8 71774601 71786835 - MGP_129S1SvImJ_P0089318 Ushbp1 protein_coding protein_coding MGP_129S1SvImJ_T0009171.1 MGP_129S1SvImJ_G0007370.1 mouse_genomes_project 8 95132200 95192944 - Gm26843 lincRNA lincRNA MGP_129S1SvImJ_T0011043.1 MGP_129S1SvImJ_G0009159.1 mouse_genomes_project 8 120741236 120741291 - Gm27361 miRNA miRNA MGP_129S1SvImJ_T0089277.1 MGP_129S1SvImJ_G0033734.1 mouse_genomes_project 8 71209645 71212431 - MGP_129S1SvImJ_P0089277 Rpl18a protein_coding protein_coding MGP_129S1SvImJ_T0088888.1 MGP_129S1SvImJ_G0033620.1 mouse_genomes_project 8 56264317 56305753 + MGP_129S1SvImJ_P0088888 Fbxo8 protein_coding protein_coding MGP_129S1SvImJ_T0088889.1 MGP_129S1SvImJ_G0033620.1 mouse_genomes_project 8 56265274 56285289 + Fbxo8 protein_coding retained_intron MGP_129S1SvImJ_T0098649.1 MGP_129S1SvImJ_G0036734.1 mouse_genomes_project 8 43607670 43607777 + Gm26089 rRNA rRNA MGP_129S1SvImJ_T0090506.1 MGP_129S1SvImJ_G0034138.1 mouse_genomes_project 8 114079907 114111361 - MGP_129S1SvImJ_P0090506 Mlkl protein_coding protein_coding MGP_129S1SvImJ_T0090507.1 MGP_129S1SvImJ_G0034138.1 mouse_genomes_project 8 114079910 114111361 - MGP_129S1SvImJ_P0090507 Mlkl protein_coding protein_coding MGP_129S1SvImJ_T0090508.1 MGP_129S1SvImJ_G0034138.1 mouse_genomes_project 8 114079912 114086066 - Mlkl protein_coding processed_transcript MGP_129S1SvImJ_T0090509.1 MGP_129S1SvImJ_G0034138.1 mouse_genomes_project 8 114105008 114110977 - MGP_129S1SvImJ_P0090509 Mlkl protein_coding protein_coding MGP_129S1SvImJ_T0018513.1 MGP_129S1SvImJ_G0015719.1 mouse_genomes_project 8 85770789 85772007 + 1700122E12Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018514.1 MGP_129S1SvImJ_G0015719.1 mouse_genomes_project 8 85771039 85771808 + 1700122E12Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0089459.1 MGP_129S1SvImJ_G0033789.1 mouse_genomes_project 8 73218194 73236491 + MGP_129S1SvImJ_P0089459 Sin3b protein_coding protein_coding MGP_129S1SvImJ_T0089460.1 MGP_129S1SvImJ_G0033789.1 mouse_genomes_project 8 73218194 73255978 + MGP_129S1SvImJ_P0089460 Sin3b protein_coding protein_coding MGP_129S1SvImJ_T0011025.1 MGP_129S1SvImJ_G0009141.1 mouse_genomes_project 8 104628659 104628754 - Gm26301 miRNA miRNA MGP_129S1SvImJ_T0089711.1 MGP_129S1SvImJ_G0033868.1 mouse_genomes_project 8 85614231 85617489 + MGP_129S1SvImJ_P0089711 Lyl1 protein_coding protein_coding MGP_129S1SvImJ_T0016000.1 MGP_129S1SvImJ_G0014089.1 mouse_genomes_project 8 82063212 82064185 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0089648.1 MGP_129S1SvImJ_G0033856.1 mouse_genomes_project 8 85003412 85020294 - MGP_129S1SvImJ_P0089648 Cc2d1a protein_coding protein_coding MGP_129S1SvImJ_T0089649.1 MGP_129S1SvImJ_G0033856.1 mouse_genomes_project 8 85003412 85020365 - MGP_129S1SvImJ_P0089649 Cc2d1a protein_coding protein_coding MGP_129S1SvImJ_T0089650.1 MGP_129S1SvImJ_G0033856.1 mouse_genomes_project 8 85003421 85009285 - Cc2d1a protein_coding retained_intron MGP_129S1SvImJ_T0089651.1 MGP_129S1SvImJ_G0033856.1 mouse_genomes_project 8 85018883 85020326 - Cc2d1a protein_coding processed_transcript MGP_129S1SvImJ_T0010981.1 MGP_129S1SvImJ_G0009097.1 mouse_genomes_project 8 25843397 25843479 + Gm44493 miRNA miRNA MGP_129S1SvImJ_T0088305.1 MGP_129S1SvImJ_G0033421.1 mouse_genomes_project 8 17027408 17030059 + MGP_129S1SvImJ_P0088305 Defb7 protein_coding protein_coding MGP_129S1SvImJ_T0100104.1 MGP_129S1SvImJ_G0038171.1 mouse_genomes_project 8 20697585 20697703 - Gm24735 snRNA snRNA MGP_129S1SvImJ_T0098399.1 MGP_129S1SvImJ_G0036484.1 mouse_genomes_project 8 124605294 124606384 + pseudogene pseudogene MGP_129S1SvImJ_T0011001.1 MGP_129S1SvImJ_G0009117.1 mouse_genomes_project 8 84789034 84789148 - Gm44450 miRNA miRNA MGP_129S1SvImJ_T0088983.1 MGP_129S1SvImJ_G0033648.1 mouse_genomes_project 8 65036913 65042626 - MGP_129S1SvImJ_P0088983 protein_coding protein_coding MGP_129S1SvImJ_T0088984.1 MGP_129S1SvImJ_G0033648.1 mouse_genomes_project 8 65038793 65061389 - protein_coding processed_transcript MGP_129S1SvImJ_T0088985.1 MGP_129S1SvImJ_G0033648.1 mouse_genomes_project 8 65050823 65061465 - MGP_129S1SvImJ_P0088985 protein_coding protein_coding MGP_129S1SvImJ_T0088986.1 MGP_129S1SvImJ_G0033648.1 mouse_genomes_project 8 65050823 65061629 - MGP_129S1SvImJ_P0088986 protein_coding protein_coding MGP_129S1SvImJ_T0090228.1 MGP_129S1SvImJ_G0034040.1 mouse_genomes_project 8 107598665 107601369 + MGP_129S1SvImJ_P0090228 Tmem208 protein_coding protein_coding MGP_129S1SvImJ_T0090229.1 MGP_129S1SvImJ_G0034040.1 mouse_genomes_project 8 107598673 107601367 + MGP_129S1SvImJ_P0090229 Tmem208 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090230.1 MGP_129S1SvImJ_G0034040.1 mouse_genomes_project 8 107598699 107601364 + MGP_129S1SvImJ_P0090230 Tmem208 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090231.1 MGP_129S1SvImJ_G0034040.1 mouse_genomes_project 8 107598706 107607526 + MGP_129S1SvImJ_P0090231 Tmem208 protein_coding protein_coding MGP_129S1SvImJ_T0090232.1 MGP_129S1SvImJ_G0034040.1 mouse_genomes_project 8 107598766 107607108 + MGP_129S1SvImJ_P0090232 Tmem208 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0010970.1 MGP_129S1SvImJ_G0009086.1 mouse_genomes_project 8 10452254 10452315 + Mir7065 miRNA miRNA MGP_129S1SvImJ_T0089525.1 MGP_129S1SvImJ_G0033810.1 mouse_genomes_project 8 79872524 79911806 - MGP_129S1SvImJ_P0089525 1700011L22Rik protein_coding protein_coding MGP_129S1SvImJ_T0011747.1 MGP_129S1SvImJ_G0009863.1 mouse_genomes_project 8 108411850 108412110 - Gm27956 misc_RNA misc_RNA MGP_129S1SvImJ_T0090789.1 MGP_129S1SvImJ_G0034221.1 mouse_genomes_project 8 125887470 125891201 - MGP_129S1SvImJ_P0090789 Trhr2 protein_coding protein_coding MGP_129S1SvImJ_T0011023.1 MGP_129S1SvImJ_G0009139.1 mouse_genomes_project 8 97261256 97261320 - Mir7073 miRNA miRNA MGP_129S1SvImJ_T0088224.1 MGP_129S1SvImJ_G0033389.1 mouse_genomes_project 8 11262061 11267544 - MGP_129S1SvImJ_P0088224 Coprs protein_coding protein_coding MGP_129S1SvImJ_T0090310.1 MGP_129S1SvImJ_G0034074.1 mouse_genomes_project 8 108342902 108345164 - MGP_129S1SvImJ_P0090310 Ddx28 protein_coding protein_coding MGP_129S1SvImJ_T0011022.1 MGP_129S1SvImJ_G0009138.1 mouse_genomes_project 8 95933453 95933513 + Mir7072 miRNA miRNA MGP_129S1SvImJ_T0088547.1 MGP_129S1SvImJ_G0033516.1 mouse_genomes_project 8 29575123 29626907 + MGP_129S1SvImJ_P0088547 Fut10 protein_coding protein_coding MGP_129S1SvImJ_T0088548.1 MGP_129S1SvImJ_G0033516.1 mouse_genomes_project 8 29575130 29655890 + MGP_129S1SvImJ_P0088548 Fut10 protein_coding protein_coding MGP_129S1SvImJ_T0088549.1 MGP_129S1SvImJ_G0033516.1 mouse_genomes_project 8 29589046 29625140 + Fut10 protein_coding processed_transcript MGP_129S1SvImJ_T0089731.1 MGP_129S1SvImJ_G0033874.1 mouse_genomes_project 8 85779736 85782601 - MGP_129S1SvImJ_P0089731 protein_coding protein_coding MGP_129S1SvImJ_T0090593.1 MGP_129S1SvImJ_G0034169.1 mouse_genomes_project 8 120102321 120115721 - MGP_129S1SvImJ_P0090593 Gcsh protein_coding protein_coding MGP_129S1SvImJ_T0090594.1 MGP_129S1SvImJ_G0034169.1 mouse_genomes_project 8 120104347 120113542 - Gcsh protein_coding processed_transcript MGP_129S1SvImJ_T0088484.1 MGP_129S1SvImJ_G0033486.1 mouse_genomes_project 8 23821344 23837588 + MGP_129S1SvImJ_P0088484 protein_coding protein_coding MGP_129S1SvImJ_T0089944.1 MGP_129S1SvImJ_G0033934.1 mouse_genomes_project 8 93648972 93654229 + MGP_129S1SvImJ_P0089944 Irx5 protein_coding protein_coding MGP_129S1SvImJ_T0090454.1 MGP_129S1SvImJ_G0034127.1 mouse_genomes_project 8 113423285 113424155 - Il34 protein_coding processed_transcript MGP_129S1SvImJ_T0090455.1 MGP_129S1SvImJ_G0034127.1 mouse_genomes_project 8 113423296 113496186 - MGP_129S1SvImJ_P0090455 Il34 protein_coding protein_coding MGP_129S1SvImJ_T0090456.1 MGP_129S1SvImJ_G0034127.1 mouse_genomes_project 8 113423296 113496155 - MGP_129S1SvImJ_P0090456 Il34 protein_coding protein_coding MGP_129S1SvImJ_T0090457.1 MGP_129S1SvImJ_G0034127.1 mouse_genomes_project 8 113440434 113479397 - Il34 protein_coding processed_transcript MGP_129S1SvImJ_T0090458.1 MGP_129S1SvImJ_G0034127.1 mouse_genomes_project 8 113440723 113496207 - Il34 protein_coding processed_transcript MGP_129S1SvImJ_T0090754.1 MGP_129S1SvImJ_G0034216.1 mouse_genomes_project 8 125326239 125356939 - MGP_129S1SvImJ_P0090754 Klhdc4 protein_coding protein_coding MGP_129S1SvImJ_T0090755.1 MGP_129S1SvImJ_G0034216.1 mouse_genomes_project 8 125326259 125356910 - Klhdc4 protein_coding retained_intron MGP_129S1SvImJ_T0090756.1 MGP_129S1SvImJ_G0034216.1 mouse_genomes_project 8 125326270 125327355 - Klhdc4 protein_coding retained_intron MGP_129S1SvImJ_T0090757.1 MGP_129S1SvImJ_G0034216.1 mouse_genomes_project 8 125326473 125356850 - MGP_129S1SvImJ_P0090757 Klhdc4 protein_coding protein_coding MGP_129S1SvImJ_T0090758.1 MGP_129S1SvImJ_G0034216.1 mouse_genomes_project 8 125326473 125356850 - MGP_129S1SvImJ_P0090758 Klhdc4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090759.1 MGP_129S1SvImJ_G0034216.1 mouse_genomes_project 8 125326473 125356850 - MGP_129S1SvImJ_P0090759 Klhdc4 protein_coding protein_coding MGP_129S1SvImJ_T0090760.1 MGP_129S1SvImJ_G0034216.1 mouse_genomes_project 8 125328095 125336719 - Klhdc4 protein_coding processed_transcript MGP_129S1SvImJ_T0090761.1 MGP_129S1SvImJ_G0034216.1 mouse_genomes_project 8 125329388 125331523 - Klhdc4 protein_coding retained_intron MGP_129S1SvImJ_T0090762.1 MGP_129S1SvImJ_G0034216.1 mouse_genomes_project 8 125352473 125356879 - Klhdc4 protein_coding retained_intron MGP_129S1SvImJ_T0090763.1 MGP_129S1SvImJ_G0034216.1 mouse_genomes_project 8 125352767 125356874 - MGP_129S1SvImJ_P0090763 Klhdc4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0009179.1 MGP_129S1SvImJ_G0007376.1 mouse_genomes_project 8 107922014 107936452 - Gm5914 lincRNA lincRNA MGP_129S1SvImJ_T0009180.1 MGP_129S1SvImJ_G0007376.1 mouse_genomes_project 8 107922028 107936587 - Gm5914 lincRNA lincRNA MGP_129S1SvImJ_T0088764.1 MGP_129S1SvImJ_G0033583.1 mouse_genomes_project 8 45083608 45116312 + MGP_129S1SvImJ_P0088764 Lrp2bp protein_coding protein_coding MGP_129S1SvImJ_T0088765.1 MGP_129S1SvImJ_G0033583.1 mouse_genomes_project 8 45083613 45116043 + MGP_129S1SvImJ_P0088765 Lrp2bp protein_coding protein_coding MGP_129S1SvImJ_T0088766.1 MGP_129S1SvImJ_G0033583.1 mouse_genomes_project 8 45096598 45118142 + MGP_129S1SvImJ_P0088766 Lrp2bp protein_coding protein_coding MGP_129S1SvImJ_T0088767.1 MGP_129S1SvImJ_G0033583.1 mouse_genomes_project 8 45096607 45116300 + MGP_129S1SvImJ_P0088767 Lrp2bp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088768.1 MGP_129S1SvImJ_G0033583.1 mouse_genomes_project 8 45097746 45102327 + Lrp2bp protein_coding processed_transcript MGP_129S1SvImJ_T0088769.1 MGP_129S1SvImJ_G0033583.1 mouse_genomes_project 8 45108639 45118113 + Lrp2bp protein_coding processed_transcript MGP_129S1SvImJ_T0088698.1 MGP_129S1SvImJ_G0033565.1 mouse_genomes_project 8 42098002 42108703 + MGP_129S1SvImJ_P0088698 Triml2 protein_coding protein_coding MGP_129S1SvImJ_T0088006.1 MGP_129S1SvImJ_G0033323.1 mouse_genomes_project 8 1063720 1065363 - MGP_129S1SvImJ_P0088006 protein_coding protein_coding MGP_129S1SvImJ_T0088414.1 MGP_129S1SvImJ_G0033473.1 mouse_genomes_project 8 22678780 22691480 - MGP_129S1SvImJ_P0088414 Adam3 protein_coding protein_coding MGP_129S1SvImJ_T0088415.1 MGP_129S1SvImJ_G0033473.1 mouse_genomes_project 8 22678787 22730514 - MGP_129S1SvImJ_P0088415 Adam3 protein_coding protein_coding MGP_129S1SvImJ_T0088416.1 MGP_129S1SvImJ_G0033473.1 mouse_genomes_project 8 22678856 22730460 - MGP_129S1SvImJ_P0088416 Adam3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088417.1 MGP_129S1SvImJ_G0033473.1 mouse_genomes_project 8 22682317 22730450 - MGP_129S1SvImJ_P0088417 Adam3 protein_coding protein_coding MGP_129S1SvImJ_T0088418.1 MGP_129S1SvImJ_G0033473.1 mouse_genomes_project 8 22711435 22730450 - MGP_129S1SvImJ_P0088418 Adam3 protein_coding protein_coding MGP_129S1SvImJ_T0088419.1 MGP_129S1SvImJ_G0033473.1 mouse_genomes_project 8 22719711 22730447 - Adam3 protein_coding processed_transcript MGP_129S1SvImJ_T0088420.1 MGP_129S1SvImJ_G0033473.1 mouse_genomes_project 8 22719785 22730462 - Adam3 protein_coding processed_transcript MGP_129S1SvImJ_T0088421.1 MGP_129S1SvImJ_G0033473.1 mouse_genomes_project 8 22719786 22730487 - Adam3 protein_coding processed_transcript MGP_129S1SvImJ_T0088422.1 MGP_129S1SvImJ_G0033473.1 mouse_genomes_project 8 22719825 22730450 - MGP_129S1SvImJ_P0088422 Adam3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088423.1 MGP_129S1SvImJ_G0033473.1 mouse_genomes_project 8 22719850 22730444 - MGP_129S1SvImJ_P0088423 Adam3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0005417.1 MGP_129S1SvImJ_G0004592.1 mouse_genomes_project 8 123411344 123420439 - Gm15684 antisense antisense MGP_129S1SvImJ_T0089485.1 MGP_129S1SvImJ_G0033799.1 mouse_genomes_project 8 77453043 77462055 + MGP_129S1SvImJ_P0089485 Nr3c2 protein_coding protein_coding MGP_129S1SvImJ_T0089486.1 MGP_129S1SvImJ_G0033799.1 mouse_genomes_project 8 77453373 77818130 + MGP_129S1SvImJ_P0089486 Nr3c2 protein_coding protein_coding MGP_129S1SvImJ_T0089487.1 MGP_129S1SvImJ_G0033799.1 mouse_genomes_project 8 77455883 77816114 + MGP_129S1SvImJ_P0089487 Nr3c2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089488.1 MGP_129S1SvImJ_G0033799.1 mouse_genomes_project 8 77455883 77818125 + MGP_129S1SvImJ_P0089488 Nr3c2 protein_coding protein_coding MGP_129S1SvImJ_T0089489.1 MGP_129S1SvImJ_G0033799.1 mouse_genomes_project 8 77455942 77462298 + MGP_129S1SvImJ_P0089489 Nr3c2 protein_coding protein_coding MGP_129S1SvImJ_T0089490.1 MGP_129S1SvImJ_G0033799.1 mouse_genomes_project 8 77456071 77816781 + MGP_129S1SvImJ_P0089490 Nr3c2 protein_coding protein_coding MGP_129S1SvImJ_T0089491.1 MGP_129S1SvImJ_G0033799.1 mouse_genomes_project 8 77461913 77815648 + MGP_129S1SvImJ_P0089491 Nr3c2 protein_coding protein_coding MGP_129S1SvImJ_T0089492.1 MGP_129S1SvImJ_G0033799.1 mouse_genomes_project 8 77699324 77757739 + Nr3c2 protein_coding processed_transcript MGP_129S1SvImJ_T0090432.1 MGP_129S1SvImJ_G0034115.1 mouse_genomes_project 8 112484644 112521890 + Phlpp2 protein_coding retained_intron MGP_129S1SvImJ_T0090433.1 MGP_129S1SvImJ_G0034115.1 mouse_genomes_project 8 112484721 112560336 + MGP_129S1SvImJ_P0090433 Phlpp2 protein_coding protein_coding MGP_129S1SvImJ_T0088671.1 MGP_129S1SvImJ_G0033558.1 mouse_genomes_project 8 39753596 39770334 + Pdgfrl protein_coding retained_intron MGP_129S1SvImJ_T0088672.1 MGP_129S1SvImJ_G0033558.1 mouse_genomes_project 8 39753612 39822806 + MGP_129S1SvImJ_P0088672 Pdgfrl protein_coding protein_coding MGP_129S1SvImJ_T0009206.1 MGP_129S1SvImJ_G0007397.1 mouse_genomes_project 8 125368556 125379254 + Gm26812 lincRNA lincRNA MGP_129S1SvImJ_T0009207.1 MGP_129S1SvImJ_G0007397.1 mouse_genomes_project 8 125370248 125378966 + Gm26812 lincRNA lincRNA MGP_129S1SvImJ_T0088003.1 MGP_129S1SvImJ_G0033322.1 mouse_genomes_project 8 908683 914646 - MGP_129S1SvImJ_P0088003 Cd209c protein_coding protein_coding MGP_129S1SvImJ_T0088004.1 MGP_129S1SvImJ_G0033322.1 mouse_genomes_project 8 908755 916458 - MGP_129S1SvImJ_P0088004 Cd209c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088005.1 MGP_129S1SvImJ_G0033322.1 mouse_genomes_project 8 912758 916363 - MGP_129S1SvImJ_P0088005 Cd209c protein_coding unknown_likely_coding MGP_129S1SvImJ_T0088486.1 MGP_129S1SvImJ_G0033488.1 mouse_genomes_project 8 23855200 23875787 + MGP_129S1SvImJ_P0088486 Lsm1 protein_coding protein_coding MGP_129S1SvImJ_T0088183.1 MGP_129S1SvImJ_G0033373.1 mouse_genomes_project 8 10484848 10501811 + MGP_129S1SvImJ_P0088183 Lamp1 protein_coding protein_coding MGP_129S1SvImJ_T0101415.1 MGP_129S1SvImJ_G0039482.1 mouse_genomes_project 8 113532665 113532741 - Gm22193 snoRNA snoRNA MGP_129S1SvImJ_T0090263.1 MGP_129S1SvImJ_G0034052.1 mouse_genomes_project 8 107935655 107982606 + Ctcf protein_coding processed_transcript MGP_129S1SvImJ_T0090264.1 MGP_129S1SvImJ_G0034052.1 mouse_genomes_project 8 107935666 107983881 + MGP_129S1SvImJ_P0090264 Ctcf protein_coding protein_coding MGP_129S1SvImJ_T0090265.1 MGP_129S1SvImJ_G0034052.1 mouse_genomes_project 8 107936036 107963556 + Ctcf protein_coding processed_transcript MGP_129S1SvImJ_T0090266.1 MGP_129S1SvImJ_G0034052.1 mouse_genomes_project 8 107936167 107963273 + Ctcf protein_coding processed_transcript MGP_129S1SvImJ_T0090267.1 MGP_129S1SvImJ_G0034052.1 mouse_genomes_project 8 107975432 107981576 + Ctcf protein_coding retained_intron MGP_129S1SvImJ_T0090268.1 MGP_129S1SvImJ_G0034052.1 mouse_genomes_project 8 107975432 107978989 + Ctcf protein_coding processed_transcript MGP_129S1SvImJ_T0091024.1 MGP_129S1SvImJ_G0034298.1 mouse_genomes_project 8 130808846 130832737 - MGP_129S1SvImJ_P0091024 Rbm34 protein_coding protein_coding MGP_129S1SvImJ_T0100138.1 MGP_129S1SvImJ_G0038205.1 mouse_genomes_project 8 112455784 112455886 - Gm25321 snRNA snRNA MGP_129S1SvImJ_T0091016.1 MGP_129S1SvImJ_G0034291.1 mouse_genomes_project 8 129792619 129831545 + MGP_129S1SvImJ_P0091016 Kcnk1 protein_coding protein_coding MGP_129S1SvImJ_T0005413.1 MGP_129S1SvImJ_G0004588.1 mouse_genomes_project 8 117629115 117631684 - Gm16117 antisense antisense MGP_129S1SvImJ_T0089108.1 MGP_129S1SvImJ_G0033686.1 mouse_genomes_project 8 70288121 70317762 + MGP_129S1SvImJ_P0089108 Sugp1 protein_coding protein_coding MGP_129S1SvImJ_T0090817.1 MGP_129S1SvImJ_G0034229.1 mouse_genomes_project 8 126024528 126099280 - MGP_129S1SvImJ_P0090817 Piezo1 protein_coding protein_coding MGP_129S1SvImJ_T0090818.1 MGP_129S1SvImJ_G0034229.1 mouse_genomes_project 8 126024542 126042600 - MGP_129S1SvImJ_P0090818 Piezo1 protein_coding protein_coding MGP_129S1SvImJ_T0090819.1 MGP_129S1SvImJ_G0034229.1 mouse_genomes_project 8 126024551 126027611 - Piezo1 protein_coding retained_intron MGP_129S1SvImJ_T0090820.1 MGP_129S1SvImJ_G0034229.1 mouse_genomes_project 8 126024812 126042599 - MGP_129S1SvImJ_P0090820 Piezo1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090821.1 MGP_129S1SvImJ_G0034229.1 mouse_genomes_project 8 126024812 126098989 - MGP_129S1SvImJ_P0090821 Piezo1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0090822.1 MGP_129S1SvImJ_G0034229.1 mouse_genomes_project 8 126024871 126025831 - Piezo1 protein_coding retained_intron MGP_129S1SvImJ_T0090823.1 MGP_129S1SvImJ_G0034229.1 mouse_genomes_project 8 126024910 126025507 - Piezo1 protein_coding retained_intron MGP_129S1SvImJ_T0090824.1 MGP_129S1SvImJ_G0034229.1 mouse_genomes_project 8 126026197 126026700 - Piezo1 protein_coding retained_intron MGP_129S1SvImJ_T0090825.1 MGP_129S1SvImJ_G0034229.1 mouse_genomes_project 8 126027695 126028455 - Piezo1 protein_coding retained_intron MGP_129S1SvImJ_T0090826.1 MGP_129S1SvImJ_G0034229.1 mouse_genomes_project 8 126028754 126040918 - MGP_129S1SvImJ_P0090826 Piezo1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088437.1 MGP_129S1SvImJ_G0033477.1 mouse_genomes_project 8 23015604 23021014 + MGP_129S1SvImJ_P0088437 Tm2d2 protein_coding protein_coding MGP_129S1SvImJ_T0089101.1 MGP_129S1SvImJ_G0033683.1 mouse_genomes_project 8 70131105 70132440 + MGP_129S1SvImJ_P0089101 Tssk6 protein_coding protein_coding MGP_129S1SvImJ_T0088330.1 MGP_129S1SvImJ_G0033443.1 mouse_genomes_project 8 19901232 19912137 + MGP_129S1SvImJ_P0088330 Alg11 protein_coding protein_coding MGP_129S1SvImJ_T0088331.1 MGP_129S1SvImJ_G0033443.1 mouse_genomes_project 8 19901233 19912137 + MGP_129S1SvImJ_P0088331 Alg11 protein_coding protein_coding MGP_129S1SvImJ_T0088332.1 MGP_129S1SvImJ_G0033443.1 mouse_genomes_project 8 19901251 19905959 + MGP_129S1SvImJ_P0088332 Alg11 protein_coding protein_coding MGP_129S1SvImJ_T0088333.1 MGP_129S1SvImJ_G0033443.1 mouse_genomes_project 8 19909525 19910389 + Alg11 protein_coding processed_transcript MGP_129S1SvImJ_T0005341.1 MGP_129S1SvImJ_G0004530.1 mouse_genomes_project 8 152706 153644 + Gm16180 antisense antisense MGP_129S1SvImJ_T0089260.1 MGP_129S1SvImJ_G0033724.1 mouse_genomes_project 8 71059586 71061860 - MGP_129S1SvImJ_P0089260 Mpv17l2 protein_coding protein_coding MGP_129S1SvImJ_T0089069.1 MGP_129S1SvImJ_G0033673.1 mouse_genomes_project 8 69955928 69964208 - MGP_129S1SvImJ_P0089069 Zfp963 protein_coding protein_coding MGP_129S1SvImJ_T0089071.1 MGP_129S1SvImJ_G0033673.1 mouse_genomes_project 8 69957223 69964216 - MGP_129S1SvImJ_P0089071 Zfp963 protein_coding protein_coding MGP_129S1SvImJ_T0089467.1 MGP_129S1SvImJ_G0033793.1 mouse_genomes_project 8 75435993 75481475 + MGP_129S1SvImJ_P0089467 Hmgxb4 protein_coding protein_coding MGP_129S1SvImJ_T0089468.1 MGP_129S1SvImJ_G0033793.1 mouse_genomes_project 8 75436316 75442436 + Hmgxb4 protein_coding processed_transcript MGP_129S1SvImJ_T0089469.1 MGP_129S1SvImJ_G0033793.1 mouse_genomes_project 8 75436316 75481481 + MGP_129S1SvImJ_P0089469 Hmgxb4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089470.1 MGP_129S1SvImJ_G0033793.1 mouse_genomes_project 8 75436328 75441858 + Hmgxb4 protein_coding processed_transcript MGP_129S1SvImJ_T0089471.1 MGP_129S1SvImJ_G0033793.1 mouse_genomes_project 8 75436349 75443734 + Hmgxb4 protein_coding retained_intron MGP_129S1SvImJ_T0089472.1 MGP_129S1SvImJ_G0033793.1 mouse_genomes_project 8 75442867 75478693 + MGP_129S1SvImJ_P0089472 Hmgxb4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089473.1 MGP_129S1SvImJ_G0033793.1 mouse_genomes_project 8 75463587 75481416 + MGP_129S1SvImJ_P0089473 Hmgxb4 protein_coding protein_coding MGP_129S1SvImJ_T0089474.1 MGP_129S1SvImJ_G0033793.1 mouse_genomes_project 8 75470220 75471442 + Hmgxb4 protein_coding retained_intron MGP_129S1SvImJ_T0090281.1 MGP_129S1SvImJ_G0034060.1 mouse_genomes_project 8 108142214 108161510 + MGP_129S1SvImJ_P0090281 Tsnaxip1 protein_coding protein_coding MGP_129S1SvImJ_T0090479.1 MGP_129S1SvImJ_G0034132.1 mouse_genomes_project 8 113681016 113703643 - MGP_129S1SvImJ_P0090479 Ddx19a protein_coding protein_coding MGP_129S1SvImJ_T0090480.1 MGP_129S1SvImJ_G0034132.1 mouse_genomes_project 8 113684751 113686840 - Ddx19a protein_coding retained_intron MGP_129S1SvImJ_T0090481.1 MGP_129S1SvImJ_G0034132.1 mouse_genomes_project 8 113686678 113703613 - Ddx19a protein_coding retained_intron MGP_129S1SvImJ_T0005427.1 MGP_129S1SvImJ_G0004601.1 mouse_genomes_project 8 128979909 128982833 - Gm16237 antisense antisense MGP_129S1SvImJ_T0090096.1 MGP_129S1SvImJ_G0033988.1 mouse_genomes_project 8 97016898 97044889 + MGP_129S1SvImJ_P0090096 Ccdc113 protein_coding protein_coding MGP_129S1SvImJ_T0009107.1 MGP_129S1SvImJ_G0007324.1 mouse_genomes_project 8 45853770 45862302 - lincRNA lincRNA MGP_129S1SvImJ_T0088531.1 MGP_129S1SvImJ_G0033507.1 mouse_genomes_project 8 25556031 25561707 + MGP_129S1SvImJ_P0088531 Tex24 protein_coding protein_coding MGP_129S1SvImJ_T0088166.1 MGP_129S1SvImJ_G0033369.1 mouse_genomes_project 8 10349864 10369343 + MGP_129S1SvImJ_P0088166 F10 protein_coding protein_coding MGP_129S1SvImJ_T0088167.1 MGP_129S1SvImJ_G0033369.1 mouse_genomes_project 8 10349924 10369325 + MGP_129S1SvImJ_P0088167 F10 protein_coding protein_coding MGP_129S1SvImJ_T0088168.1 MGP_129S1SvImJ_G0033369.1 mouse_genomes_project 8 10350129 10359611 + MGP_129S1SvImJ_P0088168 F10 protein_coding protein_coding MGP_129S1SvImJ_T0088438.1 MGP_129S1SvImJ_G0033478.1 mouse_genomes_project 8 23023202 23036722 - MGP_129S1SvImJ_P0088438 Htra4 protein_coding protein_coding MGP_129S1SvImJ_T0088439.1 MGP_129S1SvImJ_G0033478.1 mouse_genomes_project 8 23027413 23035090 - Htra4 protein_coding retained_intron MGP_129S1SvImJ_T0088101.1 MGP_129S1SvImJ_G0033355.1 mouse_genomes_project 8 8725827 8765097 - MGP_129S1SvImJ_P0088101 Cars2 protein_coding protein_coding MGP_129S1SvImJ_T0088102.1 MGP_129S1SvImJ_G0033355.1 mouse_genomes_project 8 8725829 8765003 - MGP_129S1SvImJ_P0088102 Cars2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0010964.1 MGP_129S1SvImJ_G0009080.1 mouse_genomes_project 8 5763018 5763088 - Mir7654 miRNA miRNA MGP_129S1SvImJ_T0088962.1 MGP_129S1SvImJ_G0033639.1 mouse_genomes_project 8 62909432 63341066 + MGP_129S1SvImJ_P0088962 Spock3 protein_coding protein_coding MGP_129S1SvImJ_T0088963.1 MGP_129S1SvImJ_G0033639.1 mouse_genomes_project 8 62909655 63341074 + MGP_129S1SvImJ_P0088963 Spock3 protein_coding protein_coding MGP_129S1SvImJ_T0088964.1 MGP_129S1SvImJ_G0033639.1 mouse_genomes_project 8 62909784 63121844 + Spock3 protein_coding retained_intron MGP_129S1SvImJ_T0088965.1 MGP_129S1SvImJ_G0033639.1 mouse_genomes_project 8 62909784 63341317 + MGP_129S1SvImJ_P0088965 Spock3 protein_coding protein_coding MGP_129S1SvImJ_T0088966.1 MGP_129S1SvImJ_G0033639.1 mouse_genomes_project 8 62910223 63341308 + MGP_129S1SvImJ_P0088966 Spock3 protein_coding protein_coding MGP_129S1SvImJ_T0088967.1 MGP_129S1SvImJ_G0033639.1 mouse_genomes_project 8 62910348 62927339 + Spock3 protein_coding processed_transcript MGP_129S1SvImJ_T0100148.1 MGP_129S1SvImJ_G0038215.1 mouse_genomes_project 8 128033040 128033126 + Gm24459 snRNA snRNA MGP_129S1SvImJ_T0089448.1 MGP_129S1SvImJ_G0033786.1 mouse_genomes_project 8 73078615 73084300 - MGP_129S1SvImJ_P0089448 Smim7 protein_coding protein_coding MGP_129S1SvImJ_T0089449.1 MGP_129S1SvImJ_G0033786.1 mouse_genomes_project 8 73080912 73084261 - MGP_129S1SvImJ_P0089449 Smim7 protein_coding protein_coding MGP_129S1SvImJ_T0089450.1 MGP_129S1SvImJ_G0033786.1 mouse_genomes_project 8 73083799 73084274 - Smim7 protein_coding retained_intron MGP_129S1SvImJ_T0088440.1 MGP_129S1SvImJ_G0033479.1 mouse_genomes_project 8 23036903 23105531 - MGP_129S1SvImJ_P0088440 Plekha2 protein_coding protein_coding MGP_129S1SvImJ_T0088441.1 MGP_129S1SvImJ_G0033479.1 mouse_genomes_project 8 23038598 23105322 - MGP_129S1SvImJ_P0088441 Plekha2 protein_coding protein_coding MGP_129S1SvImJ_T0088442.1 MGP_129S1SvImJ_G0033479.1 mouse_genomes_project 8 23040726 23105109 - MGP_129S1SvImJ_P0088442 Plekha2 protein_coding protein_coding MGP_129S1SvImJ_T0088443.1 MGP_129S1SvImJ_G0033479.1 mouse_genomes_project 8 23060148 23094707 - MGP_129S1SvImJ_P0088443 Plekha2 protein_coding protein_coding MGP_129S1SvImJ_T0005399.1 MGP_129S1SvImJ_G0004577.1 mouse_genomes_project 8 106796667 106811260 + 1700082M22Rik antisense antisense MGP_129S1SvImJ_T0005400.1 MGP_129S1SvImJ_G0004577.1 mouse_genomes_project 8 106805289 106811120 + 1700082M22Rik antisense antisense MGP_129S1SvImJ_T0089513.1 MGP_129S1SvImJ_G0033807.1 mouse_genomes_project 8 79135012 79373964 + MGP_129S1SvImJ_P0089513 Slc10a7 protein_coding protein_coding MGP_129S1SvImJ_T0010997.1 MGP_129S1SvImJ_G0009113.1 mouse_genomes_project 8 72968251 72968325 - Mir7068 miRNA miRNA MGP_129S1SvImJ_T0005390.1 MGP_129S1SvImJ_G0004569.1 mouse_genomes_project 8 78101123 78102604 + 0610038B21Rik antisense antisense MGP_129S1SvImJ_T0005391.1 MGP_129S1SvImJ_G0004569.1 mouse_genomes_project 8 78102139 78107890 + 0610038B21Rik antisense antisense MGP_129S1SvImJ_T0090255.1 MGP_129S1SvImJ_G0034047.1 mouse_genomes_project 8 107758257 107782957 - MGP_129S1SvImJ_P0090255 Zdhhc1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0005372.1 MGP_129S1SvImJ_G0004553.1 mouse_genomes_project 8 44037251 44042421 - Gm2366 antisense antisense MGP_129S1SvImJ_T0089796.1 MGP_129S1SvImJ_G0033891.1 mouse_genomes_project 8 86014219 86014634 - MGP_129S1SvImJ_P0089796 Gm5741 protein_coding protein_coding MGP_129S1SvImJ_T0089679.1 MGP_129S1SvImJ_G0033865.1 mouse_genomes_project 8 85580309 85600177 - MGP_129S1SvImJ_P0089679 Nacc1 protein_coding protein_coding MGP_129S1SvImJ_T0087942.1 MGP_129S1SvImJ_G0033303.1 mouse_genomes_project 8 379758 401649 + MGP_129S1SvImJ_P0087942 1700019B03Rik protein_coding protein_coding MGP_129S1SvImJ_T0087943.1 MGP_129S1SvImJ_G0033303.1 mouse_genomes_project 8 379758 401649 + MGP_129S1SvImJ_P0087943 1700019B03Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0087944.1 MGP_129S1SvImJ_G0033303.1 mouse_genomes_project 8 384739 401652 + MGP_129S1SvImJ_P0087944 1700019B03Rik protein_coding protein_coding MGP_129S1SvImJ_T0010980.1 MGP_129S1SvImJ_G0009096.1 mouse_genomes_project 8 24323313 24325161 + miRNA miRNA MGP_129S1SvImJ_T0100125.1 MGP_129S1SvImJ_G0038192.1 mouse_genomes_project 8 78155738 78155846 - Gm23468 snRNA snRNA MGP_129S1SvImJ_T0090130.1 MGP_129S1SvImJ_G0033999.1 mouse_genomes_project 8 104541865 104552527 - MGP_129S1SvImJ_P0090130 protein_coding protein_coding MGP_129S1SvImJ_T0090909.1 MGP_129S1SvImJ_G0034253.1 mouse_genomes_project 8 126985551 127014544 + MGP_129S1SvImJ_P0090909 Tcf25 protein_coding protein_coding MGP_129S1SvImJ_T0090910.1 MGP_129S1SvImJ_G0034253.1 mouse_genomes_project 8 126985562 127016826 + MGP_129S1SvImJ_P0090910 Tcf25 protein_coding protein_coding MGP_129S1SvImJ_T0002363.1 MGP_129S1SvImJ_G0002273.1 mouse_genomes_project 8 123491139 123492664 + TEC TEC MGP_129S1SvImJ_T0090189.1 MGP_129S1SvImJ_G0034026.1 mouse_genomes_project 8 107273907 107276768 + Ces3b protein_coding retained_intron MGP_129S1SvImJ_T0090190.1 MGP_129S1SvImJ_G0034026.1 mouse_genomes_project 8 107273909 107284074 + MGP_129S1SvImJ_P0090190 Ces3b protein_coding protein_coding MGP_129S1SvImJ_T0090191.1 MGP_129S1SvImJ_G0034026.1 mouse_genomes_project 8 107273917 107283736 + MGP_129S1SvImJ_P0090191 Ces3b protein_coding protein_coding MGP_129S1SvImJ_T0090192.1 MGP_129S1SvImJ_G0034026.1 mouse_genomes_project 8 107279089 107283268 + MGP_129S1SvImJ_P0090192 Ces3b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089065.1 MGP_129S1SvImJ_G0033671.1 mouse_genomes_project 8 69861160 69872048 + Zfp964 protein_coding retained_intron MGP_129S1SvImJ_T0089066.1 MGP_129S1SvImJ_G0033671.1 mouse_genomes_project 8 69861173 69882596 + MGP_129S1SvImJ_P0089066 Zfp964 protein_coding protein_coding MGP_129S1SvImJ_T0089067.1 MGP_129S1SvImJ_G0033671.1 mouse_genomes_project 8 69868432 69873329 + MGP_129S1SvImJ_P0089067 Zfp964 protein_coding protein_coding MGP_129S1SvImJ_T0088411.1 MGP_129S1SvImJ_G0033472.1 mouse_genomes_project 8 22599170 22676268 - MGP_129S1SvImJ_P0088411 Adam18 protein_coding protein_coding MGP_129S1SvImJ_T0088412.1 MGP_129S1SvImJ_G0033472.1 mouse_genomes_project 8 22599170 22676268 - MGP_129S1SvImJ_P0088412 Adam18 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088413.1 MGP_129S1SvImJ_G0033472.1 mouse_genomes_project 8 22599174 22627548 - Adam18 protein_coding processed_transcript MGP_129S1SvImJ_T0009190.1 MGP_129S1SvImJ_G0007384.1 mouse_genomes_project 8 123597017 123626596 - A330074K22Rik lincRNA lincRNA MGP_129S1SvImJ_T0100127.1 MGP_129S1SvImJ_G0038194.1 mouse_genomes_project 8 79666444 79666551 - Gm22044 snRNA snRNA MGP_129S1SvImJ_T0090858.1 MGP_129S1SvImJ_G0034241.1 mouse_genomes_project 8 126696243 126699125 + MGP_129S1SvImJ_P0090858 protein_coding protein_coding MGP_129S1SvImJ_T0009130.1 MGP_129S1SvImJ_G0007344.1 mouse_genomes_project 8 84746681 84759073 - Gm26721 lincRNA lincRNA MGP_129S1SvImJ_T0018482.1 MGP_129S1SvImJ_G0015707.1 mouse_genomes_project 8 16110272 16140808 - Gm16725 processed_transcript processed_transcript MGP_129S1SvImJ_T0090016.1 MGP_129S1SvImJ_G0033961.1 mouse_genomes_project 8 95853545 95955289 + MGP_129S1SvImJ_P0090016 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0090017.1 MGP_129S1SvImJ_G0033961.1 mouse_genomes_project 8 95899259 95935193 + protein_coding retained_intron MGP_129S1SvImJ_T0090018.1 MGP_129S1SvImJ_G0033961.1 mouse_genomes_project 8 95906984 95916549 + MGP_129S1SvImJ_P0090018 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090019.1 MGP_129S1SvImJ_G0033961.1 mouse_genomes_project 8 95949457 95951536 + protein_coding retained_intron MGP_129S1SvImJ_T0090020.1 MGP_129S1SvImJ_G0033961.1 mouse_genomes_project 8 95953093 95955295 + protein_coding retained_intron MGP_129S1SvImJ_T0090021.1 MGP_129S1SvImJ_G0033961.1 mouse_genomes_project 8 95953093 95955291 + MGP_129S1SvImJ_P0090021 protein_coding protein_coding MGP_129S1SvImJ_T0089774.1 MGP_129S1SvImJ_G0033883.1 mouse_genomes_project 8 85912375 85918841 + MGP_129S1SvImJ_P0089774 Prdx2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089775.1 MGP_129S1SvImJ_G0033883.1 mouse_genomes_project 8 85912450 85914869 + Prdx2 protein_coding retained_intron MGP_129S1SvImJ_T0089776.1 MGP_129S1SvImJ_G0033883.1 mouse_genomes_project 8 85912450 85913884 + Prdx2 protein_coding retained_intron MGP_129S1SvImJ_T0089777.1 MGP_129S1SvImJ_G0033883.1 mouse_genomes_project 8 85912613 85914387 + MGP_129S1SvImJ_P0089777 Prdx2 protein_coding protein_coding MGP_129S1SvImJ_T0089778.1 MGP_129S1SvImJ_G0033883.1 mouse_genomes_project 8 85914214 85917010 + Prdx2 protein_coding retained_intron MGP_129S1SvImJ_T0005425.1 MGP_129S1SvImJ_G0004599.1 mouse_genomes_project 8 127977888 127979264 - 1810008B01Rik antisense antisense MGP_129S1SvImJ_T0090437.1 MGP_129S1SvImJ_G0034117.1 mouse_genomes_project 8 112613371 112622738 + MGP_129S1SvImJ_P0090437 Tat protein_coding protein_coding MGP_129S1SvImJ_T0090438.1 MGP_129S1SvImJ_G0034117.1 mouse_genomes_project 8 112613440 112617629 + MGP_129S1SvImJ_P0090438 Tat protein_coding protein_coding MGP_129S1SvImJ_T0090170.1 MGP_129S1SvImJ_G0034017.1 mouse_genomes_project 8 106794699 106796826 - MGP_129S1SvImJ_P0090170 Fam96b protein_coding protein_coding MGP_129S1SvImJ_T0090171.1 MGP_129S1SvImJ_G0034017.1 mouse_genomes_project 8 106794701 106796560 - Fam96b protein_coding retained_intron MGP_129S1SvImJ_T0090172.1 MGP_129S1SvImJ_G0034017.1 mouse_genomes_project 8 106794708 106796562 - MGP_129S1SvImJ_P0090172 Fam96b protein_coding protein_coding MGP_129S1SvImJ_T0090804.1 MGP_129S1SvImJ_G0034226.1 mouse_genomes_project 8 125992518 125999006 - MGP_129S1SvImJ_P0090804 Snai3 protein_coding protein_coding MGP_129S1SvImJ_T0100117.1 MGP_129S1SvImJ_G0038184.1 mouse_genomes_project 8 53077988 53078050 + Gm22841 snRNA snRNA MGP_129S1SvImJ_T0005405.1 MGP_129S1SvImJ_G0004581.1 mouse_genomes_project 8 111470327 111475093 - Gm20686 antisense antisense MGP_129S1SvImJ_T0088748.1 MGP_129S1SvImJ_G0033578.1 mouse_genomes_project 8 44956730 44994603 + MGP_129S1SvImJ_P0088748 Pdlim3 protein_coding protein_coding MGP_129S1SvImJ_T0089538.1 MGP_129S1SvImJ_G0033816.1 mouse_genomes_project 8 80663927 80688083 - Hhip protein_coding processed_transcript MGP_129S1SvImJ_T0089539.1 MGP_129S1SvImJ_G0033816.1 mouse_genomes_project 8 80668090 80757966 - MGP_129S1SvImJ_P0089539 Hhip protein_coding protein_coding MGP_129S1SvImJ_T0088537.1 MGP_129S1SvImJ_G0033512.1 mouse_genomes_project 8 29469969 29477521 + MGP_129S1SvImJ_P0088537 Dusp26 protein_coding protein_coding MGP_129S1SvImJ_T0088538.1 MGP_129S1SvImJ_G0033512.1 mouse_genomes_project 8 29470136 29477520 + MGP_129S1SvImJ_P0088538 Dusp26 protein_coding protein_coding MGP_129S1SvImJ_T0088539.1 MGP_129S1SvImJ_G0033512.1 mouse_genomes_project 8 29470302 29472715 + Dusp26 protein_coding retained_intron MGP_129S1SvImJ_T0088540.1 MGP_129S1SvImJ_G0033512.1 mouse_genomes_project 8 29472132 29477520 + MGP_129S1SvImJ_P0088540 Dusp26 protein_coding protein_coding MGP_129S1SvImJ_T0088541.1 MGP_129S1SvImJ_G0033512.1 mouse_genomes_project 8 29474480 29477061 + Dusp26 protein_coding processed_transcript MGP_129S1SvImJ_T0090070.1 MGP_129S1SvImJ_G0033978.1 mouse_genomes_project 8 96511048 96535520 + MGP_129S1SvImJ_P0090070 Drc7 protein_coding protein_coding MGP_129S1SvImJ_T0009112.1 MGP_129S1SvImJ_G0007329.1 mouse_genomes_project 8 60866938 60869410 + B230317F23Rik lincRNA lincRNA MGP_129S1SvImJ_T0088818.1 MGP_129S1SvImJ_G0033596.1 mouse_genomes_project 8 46659212 46702535 - MGP_129S1SvImJ_P0088818 Trappc11 protein_coding protein_coding MGP_129S1SvImJ_T0088819.1 MGP_129S1SvImJ_G0033596.1 mouse_genomes_project 8 46659225 46694088 - Trappc11 protein_coding retained_intron MGP_129S1SvImJ_T0088820.1 MGP_129S1SvImJ_G0033596.1 mouse_genomes_project 8 46659226 46702538 - Trappc11 protein_coding retained_intron MGP_129S1SvImJ_T0088821.1 MGP_129S1SvImJ_G0033596.1 mouse_genomes_project 8 46673300 46680405 - MGP_129S1SvImJ_P0088821 Trappc11 protein_coding protein_coding MGP_129S1SvImJ_T0088822.1 MGP_129S1SvImJ_G0033596.1 mouse_genomes_project 8 46693722 46697100 - Trappc11 protein_coding retained_intron MGP_129S1SvImJ_T0100110.1 MGP_129S1SvImJ_G0038177.1 mouse_genomes_project 8 36030710 36030812 - Gm25126 snRNA snRNA MGP_129S1SvImJ_T0090542.1 MGP_129S1SvImJ_G0034150.1 mouse_genomes_project 8 114776793 114790979 + MGP_129S1SvImJ_P0090542 Gabarapl2 protein_coding protein_coding MGP_129S1SvImJ_T0090543.1 MGP_129S1SvImJ_G0034150.1 mouse_genomes_project 8 114776848 114777862 + Gabarapl2 protein_coding retained_intron MGP_129S1SvImJ_T0088553.1 MGP_129S1SvImJ_G0033520.1 mouse_genomes_project 8 31683995 31839922 - MGP_129S1SvImJ_P0088553 Wrn protein_coding protein_coding MGP_129S1SvImJ_T0088554.1 MGP_129S1SvImJ_G0033520.1 mouse_genomes_project 8 31683995 31839922 - MGP_129S1SvImJ_P0088554 Wrn protein_coding protein_coding MGP_129S1SvImJ_T0090802.1 MGP_129S1SvImJ_G0034224.1 mouse_genomes_project 8 125961950 125970122 - MGP_129S1SvImJ_P0090802 Cyba protein_coding protein_coding MGP_129S1SvImJ_T0089419.1 MGP_129S1SvImJ_G0033769.1 mouse_genomes_project 8 72523884 72527347 + MGP_129S1SvImJ_P0089419 Olfr372 protein_coding protein_coding MGP_129S1SvImJ_T0009160.1 MGP_129S1SvImJ_G0007365.1 mouse_genomes_project 8 93173738 93179234 - Gm28515 lincRNA lincRNA MGP_129S1SvImJ_T0101364.1 MGP_129S1SvImJ_G0039431.1 mouse_genomes_project 8 11661825 11661956 - Gm26184 snoRNA snoRNA MGP_129S1SvImJ_T0088590.1 MGP_129S1SvImJ_G0033530.1 mouse_genomes_project 8 32590569 32595287 - Dctn6 protein_coding retained_intron MGP_129S1SvImJ_T0088591.1 MGP_129S1SvImJ_G0033530.1 mouse_genomes_project 8 32590572 32609949 - MGP_129S1SvImJ_P0088591 Dctn6 protein_coding protein_coding MGP_129S1SvImJ_T0088592.1 MGP_129S1SvImJ_G0033530.1 mouse_genomes_project 8 32590712 32609689 - MGP_129S1SvImJ_P0088592 Dctn6 protein_coding protein_coding MGP_129S1SvImJ_T0088593.1 MGP_129S1SvImJ_G0033530.1 mouse_genomes_project 8 32590727 32608967 - Dctn6 protein_coding processed_transcript MGP_129S1SvImJ_T0088594.1 MGP_129S1SvImJ_G0033530.1 mouse_genomes_project 8 32590745 32605446 - MGP_129S1SvImJ_P0088594 Dctn6 protein_coding protein_coding MGP_129S1SvImJ_T0088595.1 MGP_129S1SvImJ_G0033530.1 mouse_genomes_project 8 32590756 32593087 - Dctn6 protein_coding retained_intron MGP_129S1SvImJ_T0088596.1 MGP_129S1SvImJ_G0033530.1 mouse_genomes_project 8 32590787 32609005 - MGP_129S1SvImJ_P0088596 Dctn6 protein_coding protein_coding MGP_129S1SvImJ_T0088597.1 MGP_129S1SvImJ_G0033530.1 mouse_genomes_project 8 32592672 32597938 - Dctn6 protein_coding retained_intron MGP_129S1SvImJ_T0088598.1 MGP_129S1SvImJ_G0033530.1 mouse_genomes_project 8 32594946 32609630 - Dctn6 protein_coding retained_intron MGP_129S1SvImJ_T0088599.1 MGP_129S1SvImJ_G0033530.1 mouse_genomes_project 8 32595160 32609616 - MGP_129S1SvImJ_P0088599 Dctn6 protein_coding protein_coding MGP_129S1SvImJ_T0015948.1 MGP_129S1SvImJ_G0014037.1 mouse_genomes_project 8 1823166 1823519 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015982.1 MGP_129S1SvImJ_G0014071.1 mouse_genomes_project 8 40962937 40964587 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0088877.1 MGP_129S1SvImJ_G0033617.1 mouse_genomes_project 8 55623086 55728791 + Glra3 protein_coding processed_transcript MGP_129S1SvImJ_T0088878.1 MGP_129S1SvImJ_G0033617.1 mouse_genomes_project 8 55623135 55811408 + MGP_129S1SvImJ_P0088878 Glra3 protein_coding protein_coding MGP_129S1SvImJ_T0089354.1 MGP_129S1SvImJ_G0033756.1 mouse_genomes_project 8 72004459 72014815 + MGP_129S1SvImJ_P0089354 Pgls protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089355.1 MGP_129S1SvImJ_G0033756.1 mouse_genomes_project 8 72004486 72007948 + Pgls protein_coding retained_intron MGP_129S1SvImJ_T0089356.1 MGP_129S1SvImJ_G0033756.1 mouse_genomes_project 8 72004492 72008551 + MGP_129S1SvImJ_P0089356 Pgls protein_coding protein_coding MGP_129S1SvImJ_T0089357.1 MGP_129S1SvImJ_G0033756.1 mouse_genomes_project 8 72004512 72007388 + MGP_129S1SvImJ_P0089357 Pgls protein_coding protein_coding MGP_129S1SvImJ_T0009162.1 MGP_129S1SvImJ_G0007367.1 mouse_genomes_project 8 93617350 93638046 - Crnde lincRNA lincRNA MGP_129S1SvImJ_T0009163.1 MGP_129S1SvImJ_G0007367.1 mouse_genomes_project 8 93617350 93647296 - Crnde lincRNA lincRNA MGP_129S1SvImJ_T0009164.1 MGP_129S1SvImJ_G0007367.1 mouse_genomes_project 8 93617350 93647007 - Crnde lincRNA lincRNA MGP_129S1SvImJ_T0009165.1 MGP_129S1SvImJ_G0007367.1 mouse_genomes_project 8 93617562 93647067 - Crnde lincRNA lincRNA MGP_129S1SvImJ_T0009166.1 MGP_129S1SvImJ_G0007367.1 mouse_genomes_project 8 93627491 93646940 - Crnde lincRNA lincRNA MGP_129S1SvImJ_T0009168.1 MGP_129S1SvImJ_G0007367.1 mouse_genomes_project 8 93636069 93638046 - Crnde lincRNA lincRNA MGP_129S1SvImJ_T0009169.1 MGP_129S1SvImJ_G0007367.1 mouse_genomes_project 8 93638106 93647045 - Crnde lincRNA lincRNA MGP_129S1SvImJ_T0088074.1 MGP_129S1SvImJ_G0033340.1 mouse_genomes_project 8 2640690 2642433 + MGP_129S1SvImJ_P0088074 protein_coding protein_coding MGP_129S1SvImJ_T0087993.1 MGP_129S1SvImJ_G0033317.1 mouse_genomes_project 8 659074 669560 - MGP_129S1SvImJ_P0087993 Clec4g protein_coding protein_coding MGP_129S1SvImJ_T0087994.1 MGP_129S1SvImJ_G0033317.1 mouse_genomes_project 8 668070 672658 - MGP_129S1SvImJ_P0087994 Clec4g protein_coding protein_coding MGP_129S1SvImJ_T0087995.1 MGP_129S1SvImJ_G0033317.1 mouse_genomes_project 8 669220 670660 - Clec4g protein_coding retained_intron MGP_129S1SvImJ_T0015973.1 MGP_129S1SvImJ_G0014062.1 mouse_genomes_project 8 32829120 32829507 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0090226.1 MGP_129S1SvImJ_G0034038.1 mouse_genomes_project 8 107571748 107576786 + MGP_129S1SvImJ_P0090226 Elmo3 protein_coding protein_coding MGP_129S1SvImJ_T0088474.1 MGP_129S1SvImJ_G0033484.1 mouse_genomes_project 8 23786880 23791797 + MGP_129S1SvImJ_P0088474 Plpp5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088475.1 MGP_129S1SvImJ_G0033484.1 mouse_genomes_project 8 23786880 23791797 + MGP_129S1SvImJ_P0088475 Plpp5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088476.1 MGP_129S1SvImJ_G0033484.1 mouse_genomes_project 8 23786883 23791797 + Plpp5 protein_coding retained_intron MGP_129S1SvImJ_T0088477.1 MGP_129S1SvImJ_G0033484.1 mouse_genomes_project 8 23786883 23791797 + MGP_129S1SvImJ_P0088477 Plpp5 protein_coding protein_coding MGP_129S1SvImJ_T0088478.1 MGP_129S1SvImJ_G0033484.1 mouse_genomes_project 8 23786883 23791797 + MGP_129S1SvImJ_P0088478 Plpp5 protein_coding protein_coding MGP_129S1SvImJ_T0088479.1 MGP_129S1SvImJ_G0033484.1 mouse_genomes_project 8 23786919 23788971 + Plpp5 protein_coding retained_intron MGP_129S1SvImJ_T0088480.1 MGP_129S1SvImJ_G0033484.1 mouse_genomes_project 8 23787201 23791793 + Plpp5 protein_coding retained_intron MGP_129S1SvImJ_T0088481.1 MGP_129S1SvImJ_G0033484.1 mouse_genomes_project 8 23787275 23791797 + Plpp5 protein_coding processed_transcript MGP_129S1SvImJ_T0088482.1 MGP_129S1SvImJ_G0033484.1 mouse_genomes_project 8 23789777 23791358 + Plpp5 protein_coding retained_intron MGP_129S1SvImJ_T0018515.1 MGP_129S1SvImJ_G0015720.1 mouse_genomes_project 8 85998654 86007229 - A230103J11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018516.1 MGP_129S1SvImJ_G0015720.1 mouse_genomes_project 8 85998683 86007212 - A230103J11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0089036.1 MGP_129S1SvImJ_G0033663.1 mouse_genomes_project 8 69010061 69038852 + MGP_129S1SvImJ_P0089036 Lpl protein_coding protein_coding MGP_129S1SvImJ_T0089037.1 MGP_129S1SvImJ_G0033663.1 mouse_genomes_project 8 69010125 69039365 + MGP_129S1SvImJ_P0089037 Lpl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089038.1 MGP_129S1SvImJ_G0033663.1 mouse_genomes_project 8 69010227 69021898 + Lpl protein_coding retained_intron MGP_129S1SvImJ_T0089039.1 MGP_129S1SvImJ_G0033663.1 mouse_genomes_project 8 69022970 69028044 + Lpl protein_coding processed_transcript MGP_129S1SvImJ_T0088222.1 MGP_129S1SvImJ_G0033388.1 mouse_genomes_project 8 11247035 11258909 + MGP_129S1SvImJ_P0088222 Champ1 protein_coding protein_coding MGP_129S1SvImJ_T0088223.1 MGP_129S1SvImJ_G0033388.1 mouse_genomes_project 8 11247098 11257081 + MGP_129S1SvImJ_P0088223 Champ1 protein_coding protein_coding MGP_129S1SvImJ_T0005379.1 MGP_129S1SvImJ_G0004559.1 mouse_genomes_project 8 58304202 58305231 + Gm15882 antisense antisense MGP_129S1SvImJ_T0088115.1 MGP_129S1SvImJ_G0033360.1 mouse_genomes_project 8 9094551 9114473 + MGP_129S1SvImJ_P0088115 Tex29 protein_coding protein_coding MGP_129S1SvImJ_T0088116.1 MGP_129S1SvImJ_G0033360.1 mouse_genomes_project 8 9094688 9101875 + Tex29 protein_coding processed_transcript MGP_129S1SvImJ_T0088117.1 MGP_129S1SvImJ_G0033360.1 mouse_genomes_project 8 9094996 9114417 + MGP_129S1SvImJ_P0088117 Tex29 protein_coding protein_coding MGP_129S1SvImJ_T0088118.1 MGP_129S1SvImJ_G0033360.1 mouse_genomes_project 8 9096138 9114469 + Tex29 protein_coding processed_transcript MGP_129S1SvImJ_T0089576.1 MGP_129S1SvImJ_G0033830.1 mouse_genomes_project 8 84150884 84185785 + MGP_129S1SvImJ_P0089576 Mgat4d protein_coding protein_coding MGP_129S1SvImJ_T0089577.1 MGP_129S1SvImJ_G0033830.1 mouse_genomes_project 8 84163289 84188783 + Mgat4d protein_coding processed_transcript MGP_129S1SvImJ_T0015945.1 MGP_129S1SvImJ_G0014034.1 mouse_genomes_project 8 821508 821808 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0090648.1 MGP_129S1SvImJ_G0034192.1 mouse_genomes_project 8 123117327 123135081 - MGP_129S1SvImJ_P0090648 Tldc1 protein_coding protein_coding MGP_129S1SvImJ_T0089243.1 MGP_129S1SvImJ_G0033716.1 mouse_genomes_project 8 70908458 70911162 - MGP_129S1SvImJ_P0089243 Gdf15 protein_coding protein_coding MGP_129S1SvImJ_T0089244.1 MGP_129S1SvImJ_G0033716.1 mouse_genomes_project 8 70908459 70911523 - MGP_129S1SvImJ_P0089244 Gdf15 protein_coding protein_coding MGP_129S1SvImJ_T0088190.1 MGP_129S1SvImJ_G0033376.1 mouse_genomes_project 8 10594611 10627757 - MGP_129S1SvImJ_P0088190 Dcun1d2 protein_coding protein_coding MGP_129S1SvImJ_T0088191.1 MGP_129S1SvImJ_G0033376.1 mouse_genomes_project 8 10594612 10627462 - MGP_129S1SvImJ_P0088191 Dcun1d2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088192.1 MGP_129S1SvImJ_G0033376.1 mouse_genomes_project 8 10594613 10627756 - Dcun1d2 protein_coding processed_transcript MGP_129S1SvImJ_T0088193.1 MGP_129S1SvImJ_G0033376.1 mouse_genomes_project 8 10596545 10627438 - MGP_129S1SvImJ_P0088193 Dcun1d2 protein_coding protein_coding MGP_129S1SvImJ_T0088194.1 MGP_129S1SvImJ_G0033376.1 mouse_genomes_project 8 10598551 10627465 - MGP_129S1SvImJ_P0088194 Dcun1d2 protein_coding protein_coding MGP_129S1SvImJ_T0088195.1 MGP_129S1SvImJ_G0033376.1 mouse_genomes_project 8 10617550 10620614 - Dcun1d2 protein_coding retained_intron MGP_129S1SvImJ_T0089918.1 MGP_129S1SvImJ_G0033929.1 mouse_genomes_project 8 92288856 92345568 + MGP_129S1SvImJ_P0089918 Rbl2 protein_coding protein_coding MGP_129S1SvImJ_T0089919.1 MGP_129S1SvImJ_G0033929.1 mouse_genomes_project 8 92288893 92298766 + Rbl2 protein_coding retained_intron MGP_129S1SvImJ_T0089920.1 MGP_129S1SvImJ_G0033929.1 mouse_genomes_project 8 92328492 92336822 + Rbl2 protein_coding retained_intron MGP_129S1SvImJ_T0089921.1 MGP_129S1SvImJ_G0033929.1 mouse_genomes_project 8 92328529 92335768 + Rbl2 protein_coding processed_transcript MGP_129S1SvImJ_T0089923.1 MGP_129S1SvImJ_G0033929.1 mouse_genomes_project 8 92333954 92337562 + Rbl2 protein_coding retained_intron MGP_129S1SvImJ_T0089924.1 MGP_129S1SvImJ_G0033929.1 mouse_genomes_project 8 92335373 92337502 + Rbl2 protein_coding retained_intron MGP_129S1SvImJ_T0089925.1 MGP_129S1SvImJ_G0033929.1 mouse_genomes_project 8 92336846 92337824 + Rbl2 protein_coding retained_intron MGP_129S1SvImJ_T0010967.1 MGP_129S1SvImJ_G0009083.1 mouse_genomes_project 8 9686707 9686793 + Gm25239 miRNA miRNA MGP_129S1SvImJ_T0002349.1 MGP_129S1SvImJ_G0002260.1 mouse_genomes_project 8 10602750 10603836 - TEC TEC MGP_129S1SvImJ_T0089117.1 MGP_129S1SvImJ_G0033691.1 mouse_genomes_project 8 70379771 70382374 + MGP_129S1SvImJ_P0089117 Nr2c2ap protein_coding protein_coding MGP_129S1SvImJ_T0088301.1 MGP_129S1SvImJ_G0033417.1 mouse_genomes_project 8 16701624 16704215 + MGP_129S1SvImJ_P0088301 Defb6 protein_coding protein_coding MGP_129S1SvImJ_T0101414.1 MGP_129S1SvImJ_G0039481.1 mouse_genomes_project 8 113528810 113528899 - Snord111 snoRNA snoRNA MGP_129S1SvImJ_T0090609.1 MGP_129S1SvImJ_G0034177.1 mouse_genomes_project 8 121016592 121026873 - MGP_129S1SvImJ_P0090609 Mphosph6 protein_coding protein_coding MGP_129S1SvImJ_T0101411.1 MGP_129S1SvImJ_G0039478.1 mouse_genomes_project 8 103364603 103364728 - Gm22223 snoRNA snoRNA MGP_129S1SvImJ_T0090750.1 MGP_129S1SvImJ_G0034215.1 mouse_genomes_project 8 125258438 125319507 + Jph3 protein_coding processed_transcript MGP_129S1SvImJ_T0090751.1 MGP_129S1SvImJ_G0034215.1 mouse_genomes_project 8 125260355 125320708 + MGP_129S1SvImJ_P0090751 Jph3 protein_coding protein_coding MGP_129S1SvImJ_T0090752.1 MGP_129S1SvImJ_G0034215.1 mouse_genomes_project 8 125260359 125324173 + MGP_129S1SvImJ_P0090752 Jph3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090753.1 MGP_129S1SvImJ_G0034215.1 mouse_genomes_project 8 125283366 125312456 + Jph3 protein_coding retained_intron MGP_129S1SvImJ_T0088907.1 MGP_129S1SvImJ_G0033627.1 mouse_genomes_project 8 58737884 58740427 + MGP_129S1SvImJ_P0088907 BC030500 protein_coding protein_coding MGP_129S1SvImJ_T0088908.1 MGP_129S1SvImJ_G0033627.1 mouse_genomes_project 8 58738386 58739326 + MGP_129S1SvImJ_P0088908 BC030500 protein_coding protein_coding MGP_129S1SvImJ_T0087965.1 MGP_129S1SvImJ_G0033310.1 mouse_genomes_project 8 566366 569036 + MGP_129S1SvImJ_P0087965 Pet100 protein_coding protein_coding MGP_129S1SvImJ_T0011745.1 MGP_129S1SvImJ_G0009861.1 mouse_genomes_project 8 96131182 96131452 - Gm22846 misc_RNA misc_RNA MGP_129S1SvImJ_T0101386.1 MGP_129S1SvImJ_G0039453.1 mouse_genomes_project 8 56223459 56223591 - Gm24375 snoRNA snoRNA MGP_129S1SvImJ_T0088558.1 MGP_129S1SvImJ_G0033523.1 mouse_genomes_project 8 31968238 32008036 + MGP_129S1SvImJ_P0088558 Tex15 protein_coding protein_coding MGP_129S1SvImJ_T0088559.1 MGP_129S1SvImJ_G0033523.1 mouse_genomes_project 8 31968822 32026226 + MGP_129S1SvImJ_P0088559 Tex15 protein_coding protein_coding MGP_129S1SvImJ_T0088560.1 MGP_129S1SvImJ_G0033523.1 mouse_genomes_project 8 31968822 32039523 + MGP_129S1SvImJ_P0088560 Tex15 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088561.1 MGP_129S1SvImJ_G0033523.1 mouse_genomes_project 8 31968848 32039476 + MGP_129S1SvImJ_P0088561 Tex15 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0088562.1 MGP_129S1SvImJ_G0033523.1 mouse_genomes_project 8 32023211 32039523 + MGP_129S1SvImJ_P0088562 Tex15 protein_coding protein_coding MGP_129S1SvImJ_T0088143.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10181390 10187731 + MGP_129S1SvImJ_P0088143 Mcf2l protein_coding protein_coding MGP_129S1SvImJ_T0088144.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10181411 10331625 + MGP_129S1SvImJ_P0088144 Mcf2l protein_coding protein_coding MGP_129S1SvImJ_T0088145.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10181532 10198502 + Mcf2l protein_coding processed_transcript MGP_129S1SvImJ_T0088146.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10223861 10333479 + MGP_129S1SvImJ_P0088146 Mcf2l protein_coding protein_coding MGP_129S1SvImJ_T0088147.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10224498 10333083 + MGP_129S1SvImJ_P0088147 Mcf2l protein_coding protein_coding MGP_129S1SvImJ_T0088148.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10224516 10304682 + Mcf2l protein_coding processed_transcript MGP_129S1SvImJ_T0088149.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10224580 10331882 + MGP_129S1SvImJ_P0088149 Mcf2l protein_coding protein_coding MGP_129S1SvImJ_T0088150.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10235221 10330651 + MGP_129S1SvImJ_P0088150 Mcf2l protein_coding protein_coding MGP_129S1SvImJ_T0088151.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10256417 10300676 + Mcf2l protein_coding retained_intron MGP_129S1SvImJ_T0088152.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10256465 10326509 + MGP_129S1SvImJ_P0088152 Mcf2l protein_coding protein_coding MGP_129S1SvImJ_T0088153.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10256626 10333080 + MGP_129S1SvImJ_P0088153 Mcf2l protein_coding protein_coding MGP_129S1SvImJ_T0088154.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10257927 10331848 + MGP_129S1SvImJ_P0088154 Mcf2l protein_coding protein_coding MGP_129S1SvImJ_T0088155.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10257995 10333075 + MGP_129S1SvImJ_P0088155 Mcf2l protein_coding protein_coding MGP_129S1SvImJ_T0088156.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10296800 10329942 + MGP_129S1SvImJ_P0088156 Mcf2l protein_coding protein_coding MGP_129S1SvImJ_T0088157.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10296805 10324028 + MGP_129S1SvImJ_P0088157 Mcf2l protein_coding protein_coding MGP_129S1SvImJ_T0088158.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10296820 10333079 + MGP_129S1SvImJ_P0088158 Mcf2l protein_coding protein_coding MGP_129S1SvImJ_T0088159.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10323975 10333101 + MGP_129S1SvImJ_P0088159 Mcf2l protein_coding protein_coding MGP_129S1SvImJ_T0088160.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10323991 10330568 + MGP_129S1SvImJ_P0088160 Mcf2l protein_coding protein_coding MGP_129S1SvImJ_T0088161.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10324299 10329913 + MGP_129S1SvImJ_P0088161 Mcf2l protein_coding protein_coding MGP_129S1SvImJ_T0088162.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10325543 10327845 + Mcf2l protein_coding retained_intron MGP_129S1SvImJ_T0088163.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10326042 10331571 + MGP_129S1SvImJ_P0088163 Mcf2l protein_coding protein_coding MGP_129S1SvImJ_T0088164.1 MGP_129S1SvImJ_G0033367.1 mouse_genomes_project 8 10329655 10331579 + Mcf2l protein_coding retained_intron MGP_129S1SvImJ_T0009115.1 MGP_129S1SvImJ_G0007332.1 mouse_genomes_project 8 68217174 68238759 - lincRNA lincRNA MGP_129S1SvImJ_T0009116.1 MGP_129S1SvImJ_G0007332.1 mouse_genomes_project 8 68237796 68238973 - lincRNA lincRNA MGP_129S1SvImJ_T0011019.1 MGP_129S1SvImJ_G0009135.1 mouse_genomes_project 8 90146200 90146317 + Mir8110 miRNA miRNA MGP_129S1SvImJ_T0088027.1 MGP_129S1SvImJ_G0033327.1 mouse_genomes_project 8 1212493 1222893 + MGP_129S1SvImJ_P0088027 Lrrc8e protein_coding protein_coding MGP_129S1SvImJ_T0089797.1 MGP_129S1SvImJ_G0033892.1 mouse_genomes_project 8 86019818 86023092 + MGP_129S1SvImJ_P0089797 Dhps protein_coding protein_coding MGP_129S1SvImJ_T0089798.1 MGP_129S1SvImJ_G0033892.1 mouse_genomes_project 8 86019857 86023086 + MGP_129S1SvImJ_P0089798 Dhps protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089799.1 MGP_129S1SvImJ_G0033892.1 mouse_genomes_project 8 86019867 86020872 + Dhps protein_coding retained_intron MGP_129S1SvImJ_T0089800.1 MGP_129S1SvImJ_G0033892.1 mouse_genomes_project 8 86020362 86021508 + Dhps protein_coding retained_intron MGP_129S1SvImJ_T0089801.1 MGP_129S1SvImJ_G0033892.1 mouse_genomes_project 8 86020981 86021940 + Dhps protein_coding retained_intron MGP_129S1SvImJ_T0089802.1 MGP_129S1SvImJ_G0033892.1 mouse_genomes_project 8 86020981 86023081 + Dhps protein_coding retained_intron MGP_129S1SvImJ_T0089803.1 MGP_129S1SvImJ_G0033892.1 mouse_genomes_project 8 86021507 86022378 + Dhps protein_coding retained_intron MGP_129S1SvImJ_T0089804.1 MGP_129S1SvImJ_G0033892.1 mouse_genomes_project 8 86022628 86023081 + Dhps protein_coding retained_intron MGP_129S1SvImJ_T0090179.1 MGP_129S1SvImJ_G0034020.1 mouse_genomes_project 8 107003331 107027383 + Ces2c protein_coding processed_transcript MGP_129S1SvImJ_T0090180.1 MGP_129S1SvImJ_G0034020.1 mouse_genomes_project 8 107018864 107021404 + Ces2c protein_coding processed_transcript MGP_129S1SvImJ_T0090181.1 MGP_129S1SvImJ_G0034020.1 mouse_genomes_project 8 107018872 107025917 + MGP_129S1SvImJ_P0090181 Ces2c protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089096.1 MGP_129S1SvImJ_G0033681.1 mouse_genomes_project 8 70116919 70123087 - MGP_129S1SvImJ_P0089096 Yjefn3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089097.1 MGP_129S1SvImJ_G0033681.1 mouse_genomes_project 8 70116926 70131634 - MGP_129S1SvImJ_P0089097 Yjefn3 protein_coding protein_coding MGP_129S1SvImJ_T0089098.1 MGP_129S1SvImJ_G0033681.1 mouse_genomes_project 8 70116926 70120093 - MGP_129S1SvImJ_P0089098 Yjefn3 protein_coding protein_coding MGP_129S1SvImJ_T0089099.1 MGP_129S1SvImJ_G0033681.1 mouse_genomes_project 8 70116928 70117314 - Yjefn3 protein_coding processed_transcript MGP_129S1SvImJ_T0088909.1 MGP_129S1SvImJ_G0033628.1 mouse_genomes_project 8 60319038 60383570 - MGP_129S1SvImJ_P0088909 Gm10283 protein_coding protein_coding MGP_129S1SvImJ_T0090237.1 MGP_129S1SvImJ_G0034042.1 mouse_genomes_project 8 107622142 107645296 + MGP_129S1SvImJ_P0090237 Slc9a5 protein_coding protein_coding MGP_129S1SvImJ_T0090473.1 MGP_129S1SvImJ_G0034130.1 mouse_genomes_project 8 113574169 113598782 - MGP_129S1SvImJ_P0090473 Fuk protein_coding protein_coding MGP_129S1SvImJ_T0090911.1 MGP_129S1SvImJ_G0034254.1 mouse_genomes_project 8 127019758 127023392 + MGP_129S1SvImJ_P0090911 Mc1r protein_coding protein_coding MGP_129S1SvImJ_T0089993.1 MGP_129S1SvImJ_G0033951.1 mouse_genomes_project 8 95406173 95425815 - MGP_129S1SvImJ_P0089993 Nudt21 protein_coding protein_coding MGP_129S1SvImJ_T0090173.1 MGP_129S1SvImJ_G0034018.1 mouse_genomes_project 8 106900016 106909502 + MGP_129S1SvImJ_P0090173 Ces2a protein_coding protein_coding MGP_129S1SvImJ_T0090174.1 MGP_129S1SvImJ_G0034018.1 mouse_genomes_project 8 106900031 106909506 + MGP_129S1SvImJ_P0090174 Ces2a protein_coding protein_coding MGP_129S1SvImJ_T0090175.1 MGP_129S1SvImJ_G0034018.1 mouse_genomes_project 8 106900041 106904613 + Ces2a protein_coding processed_transcript MGP_129S1SvImJ_T0090176.1 MGP_129S1SvImJ_G0034018.1 mouse_genomes_project 8 106906695 106909116 + Ces2a protein_coding retained_intron MGP_129S1SvImJ_T0089403.1 MGP_129S1SvImJ_G0033767.1 mouse_genomes_project 8 72412327 72434111 + MGP_129S1SvImJ_P0089403 Zfp961 protein_coding protein_coding MGP_129S1SvImJ_T0089404.1 MGP_129S1SvImJ_G0033767.1 mouse_genomes_project 8 72412337 72434111 + Zfp961 protein_coding processed_transcript MGP_129S1SvImJ_T0089405.1 MGP_129S1SvImJ_G0033767.1 mouse_genomes_project 8 72412355 72433701 + Zfp961 protein_coding processed_transcript MGP_129S1SvImJ_T0089406.1 MGP_129S1SvImJ_G0033767.1 mouse_genomes_project 8 72412356 72432059 + Zfp961 protein_coding processed_transcript MGP_129S1SvImJ_T0089407.1 MGP_129S1SvImJ_G0033767.1 mouse_genomes_project 8 72412359 72431834 + Zfp961 protein_coding processed_transcript MGP_129S1SvImJ_T0089408.1 MGP_129S1SvImJ_G0033767.1 mouse_genomes_project 8 72412360 72432110 + MGP_129S1SvImJ_P0089408 Zfp961 protein_coding protein_coding MGP_129S1SvImJ_T0089409.1 MGP_129S1SvImJ_G0033767.1 mouse_genomes_project 8 72412366 72431950 + Zfp961 protein_coding processed_transcript MGP_129S1SvImJ_T0089410.1 MGP_129S1SvImJ_G0033767.1 mouse_genomes_project 8 72412369 72432299 + Zfp961 protein_coding processed_transcript MGP_129S1SvImJ_T0089411.1 MGP_129S1SvImJ_G0033767.1 mouse_genomes_project 8 72412370 72430025 + Zfp961 protein_coding processed_transcript MGP_129S1SvImJ_T0089412.1 MGP_129S1SvImJ_G0033767.1 mouse_genomes_project 8 72412370 72432760 + MGP_129S1SvImJ_P0089412 Zfp961 protein_coding protein_coding MGP_129S1SvImJ_T0089413.1 MGP_129S1SvImJ_G0033767.1 mouse_genomes_project 8 72412380 72458797 + Zfp961 protein_coding processed_transcript MGP_129S1SvImJ_T0089414.1 MGP_129S1SvImJ_G0033767.1 mouse_genomes_project 8 72412380 72435491 + MGP_129S1SvImJ_P0089414 Zfp961 protein_coding protein_coding MGP_129S1SvImJ_T0089415.1 MGP_129S1SvImJ_G0033767.1 mouse_genomes_project 8 72414774 72431957 + Zfp961 protein_coding processed_transcript MGP_129S1SvImJ_T0088085.1 MGP_129S1SvImJ_G0033349.1 mouse_genomes_project 8 7390146 7787399 + MGP_129S1SvImJ_P0088085 Myo16 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0088086.1 MGP_129S1SvImJ_G0033349.1 mouse_genomes_project 8 7413883 7787390 + MGP_129S1SvImJ_P0088086 Myo16 protein_coding protein_coding MGP_129S1SvImJ_T0088170.1 MGP_129S1SvImJ_G0033371.1 mouse_genomes_project 8 10391909 10421604 - MGP_129S1SvImJ_P0088170 Pcid2 protein_coding protein_coding MGP_129S1SvImJ_T0088171.1 MGP_129S1SvImJ_G0033371.1 mouse_genomes_project 8 10391909 10421604 - MGP_129S1SvImJ_P0088171 Pcid2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088172.1 MGP_129S1SvImJ_G0033371.1 mouse_genomes_project 8 10394437 10402891 - Pcid2 protein_coding processed_transcript MGP_129S1SvImJ_T0088173.1 MGP_129S1SvImJ_G0033371.1 mouse_genomes_project 8 10394609 10420963 - Pcid2 protein_coding processed_transcript MGP_129S1SvImJ_T0088174.1 MGP_129S1SvImJ_G0033371.1 mouse_genomes_project 8 10401513 10414729 - MGP_129S1SvImJ_P0088174 Pcid2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088175.1 MGP_129S1SvImJ_G0033371.1 mouse_genomes_project 8 10401562 10420953 - MGP_129S1SvImJ_P0088175 Pcid2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090294.1 MGP_129S1SvImJ_G0034066.1 mouse_genomes_project 8 108220675 108255522 + MGP_129S1SvImJ_P0090294 Pskh1 protein_coding protein_coding MGP_129S1SvImJ_T0088631.1 MGP_129S1SvImJ_G0033547.1 mouse_genomes_project 8 36235558 37462034 - MGP_129S1SvImJ_P0088631 Sgcz protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088632.1 MGP_129S1SvImJ_G0033547.1 mouse_genomes_project 8 36235814 37462034 - MGP_129S1SvImJ_P0088632 Sgcz protein_coding protein_coding MGP_129S1SvImJ_T0010965.1 MGP_129S1SvImJ_G0009081.1 mouse_genomes_project 8 6904019 6904172 - miRNA miRNA MGP_129S1SvImJ_T0005393.1 MGP_129S1SvImJ_G0004571.1 mouse_genomes_project 8 85515113 85521057 - Gm16183 antisense antisense MGP_129S1SvImJ_T0088892.1 MGP_129S1SvImJ_G0033623.1 mouse_genomes_project 8 57211396 57216551 - MGP_129S1SvImJ_P0088892 Sap30 protein_coding protein_coding MGP_129S1SvImJ_T0090071.1 MGP_129S1SvImJ_G0033979.1 mouse_genomes_project 8 96538584 96557306 + MGP_129S1SvImJ_P0090071 Katnb1 protein_coding protein_coding MGP_129S1SvImJ_T0088861.1 MGP_129S1SvImJ_G0033612.1 mouse_genomes_project 8 54211271 54252540 + MGP_129S1SvImJ_P0088861 Asb5 protein_coding protein_coding MGP_129S1SvImJ_T0011000.1 MGP_129S1SvImJ_G0009116.1 mouse_genomes_project 8 84568580 84568687 - Mir1668 miRNA miRNA MGP_129S1SvImJ_T0090963.1 MGP_129S1SvImJ_G0034274.1 mouse_genomes_project 8 128333987 128363003 - MGP_129S1SvImJ_P0090963 2310022B05Rik protein_coding protein_coding MGP_129S1SvImJ_T0011013.1 MGP_129S1SvImJ_G0009129.1 mouse_genomes_project 8 85858693 85858802 - Gm24197 miRNA miRNA MGP_129S1SvImJ_T0088550.1 MGP_129S1SvImJ_G0033517.1 mouse_genomes_project 8 30143196 30145903 - MGP_129S1SvImJ_P0088550 protein_coding protein_coding MGP_129S1SvImJ_T0009096.1 MGP_129S1SvImJ_G0007315.1 mouse_genomes_project 8 32188804 32190078 - 1700104B16Rik lincRNA lincRNA MGP_129S1SvImJ_T0009097.1 MGP_129S1SvImJ_G0007315.1 mouse_genomes_project 8 32188804 32190083 - 1700104B16Rik lincRNA lincRNA MGP_129S1SvImJ_T0089211.1 MGP_129S1SvImJ_G0033709.1 mouse_genomes_project 8 70776743 70779163 - MGP_129S1SvImJ_P0089211 Uba52 protein_coding protein_coding MGP_129S1SvImJ_T0089212.1 MGP_129S1SvImJ_G0033709.1 mouse_genomes_project 8 70776743 70779389 - MGP_129S1SvImJ_P0089212 Uba52 protein_coding protein_coding MGP_129S1SvImJ_T0089213.1 MGP_129S1SvImJ_G0033709.1 mouse_genomes_project 8 70776743 70779158 - MGP_129S1SvImJ_P0089213 Uba52 protein_coding protein_coding MGP_129S1SvImJ_T0089214.1 MGP_129S1SvImJ_G0033709.1 mouse_genomes_project 8 70776744 70779187 - Uba52 protein_coding retained_intron MGP_129S1SvImJ_T0089215.1 MGP_129S1SvImJ_G0033709.1 mouse_genomes_project 8 70776746 70779225 - MGP_129S1SvImJ_P0089215 Uba52 protein_coding protein_coding MGP_129S1SvImJ_T0089217.1 MGP_129S1SvImJ_G0033709.1 mouse_genomes_project 8 70776808 70779609 - MGP_129S1SvImJ_P0089217 Uba52 protein_coding protein_coding MGP_129S1SvImJ_T0089218.1 MGP_129S1SvImJ_G0033709.1 mouse_genomes_project 8 70776812 70778423 - MGP_129S1SvImJ_P0089218 Uba52 protein_coding protein_coding MGP_129S1SvImJ_T0089219.1 MGP_129S1SvImJ_G0033709.1 mouse_genomes_project 8 70776910 70778745 - MGP_129S1SvImJ_P0089219 Uba52 protein_coding protein_coding MGP_129S1SvImJ_T0089070.1 MGP_129S1SvImJ_G0033674.1 mouse_genomes_project 8 69957128 69989925 - MGP_129S1SvImJ_P0089070 Gm20422 protein_coding protein_coding MGP_129S1SvImJ_T0089072.1 MGP_129S1SvImJ_G0033674.1 mouse_genomes_project 8 69957450 69981901 - MGP_129S1SvImJ_P0089072 Gm20422 protein_coding protein_coding MGP_129S1SvImJ_T0089655.1 MGP_129S1SvImJ_G0033858.1 mouse_genomes_project 8 85048384 85051215 - MGP_129S1SvImJ_P0089655 Nanos3 protein_coding protein_coding MGP_129S1SvImJ_T0089102.1 MGP_129S1SvImJ_G0033684.1 mouse_genomes_project 8 70135961 70231858 - MGP_129S1SvImJ_P0089102 Gatad2a protein_coding protein_coding MGP_129S1SvImJ_T0089103.1 MGP_129S1SvImJ_G0033684.1 mouse_genomes_project 8 70135961 70205598 - MGP_129S1SvImJ_P0089103 Gatad2a protein_coding protein_coding MGP_129S1SvImJ_T0089104.1 MGP_129S1SvImJ_G0033684.1 mouse_genomes_project 8 70135961 70231858 - MGP_129S1SvImJ_P0089104 Gatad2a protein_coding protein_coding MGP_129S1SvImJ_T0089105.1 MGP_129S1SvImJ_G0033684.1 mouse_genomes_project 8 70136016 70182079 - MGP_129S1SvImJ_P0089105 Gatad2a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0088397.1 MGP_129S1SvImJ_G0033466.1 mouse_genomes_project 8 21335309 21374813 + MGP_129S1SvImJ_P0088397 Sfrp1 protein_coding protein_coding MGP_129S1SvImJ_T0090491.1 MGP_129S1SvImJ_G0034135.1 mouse_genomes_project 8 113778359 113813071 - MGP_129S1SvImJ_P0090491 Clec18a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090492.1 MGP_129S1SvImJ_G0034135.1 mouse_genomes_project 8 113778359 113813071 - MGP_129S1SvImJ_P0090492 Clec18a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090493.1 MGP_129S1SvImJ_G0034135.1 mouse_genomes_project 8 113778359 113813071 - MGP_129S1SvImJ_P0090493 Clec18a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090494.1 MGP_129S1SvImJ_G0034135.1 mouse_genomes_project 8 113792652 113813071 - MGP_129S1SvImJ_P0090494 Clec18a protein_coding protein_coding MGP_129S1SvImJ_T0090495.1 MGP_129S1SvImJ_G0034135.1 mouse_genomes_project 8 113792652 113812845 - MGP_129S1SvImJ_P0090495 Clec18a protein_coding protein_coding MGP_129S1SvImJ_T0090496.1 MGP_129S1SvImJ_G0034135.1 mouse_genomes_project 8 113792653 113813071 - MGP_129S1SvImJ_P0090496 Clec18a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090497.1 MGP_129S1SvImJ_G0034135.1 mouse_genomes_project 8 113792653 113824877 - MGP_129S1SvImJ_P0090497 Clec18a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088852.1 MGP_129S1SvImJ_G0033608.1 mouse_genomes_project 8 53097128 53110325 + MGP_129S1SvImJ_P0088852 Aga protein_coding protein_coding MGP_129S1SvImJ_T0009136.1 MGP_129S1SvImJ_G0007350.1 mouse_genomes_project 8 87906249 87906920 - Gm27168 lincRNA lincRNA MGP_129S1SvImJ_T0089431.1 MGP_129S1SvImJ_G0033777.1 mouse_genomes_project 8 72706335 72710414 + MGP_129S1SvImJ_P0089431 Fam32a protein_coding protein_coding MGP_129S1SvImJ_T0090006.1 MGP_129S1SvImJ_G0033956.1 mouse_genomes_project 8 95574415 95575365 + MGP_129S1SvImJ_P0090006 Mt2 protein_coding protein_coding MGP_129S1SvImJ_T0090964.1 MGP_129S1SvImJ_G0034275.1 mouse_genomes_project 8 128371202 128426281 - MGP_129S1SvImJ_P0090964 Ttc13 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0090965.1 MGP_129S1SvImJ_G0034275.1 mouse_genomes_project 8 128371212 128426270 - MGP_129S1SvImJ_P0090965 Ttc13 protein_coding protein_coding MGP_129S1SvImJ_T0090966.1 MGP_129S1SvImJ_G0034275.1 mouse_genomes_project 8 128371212 128426251 - MGP_129S1SvImJ_P0090966 Ttc13 protein_coding protein_coding MGP_129S1SvImJ_T0090967.1 MGP_129S1SvImJ_G0034275.1 mouse_genomes_project 8 128371212 128426259 - MGP_129S1SvImJ_P0090967 Ttc13 protein_coding protein_coding MGP_129S1SvImJ_T0090968.1 MGP_129S1SvImJ_G0034275.1 mouse_genomes_project 8 128373325 128374096 - Ttc13 protein_coding retained_intron MGP_129S1SvImJ_T0090969.1 MGP_129S1SvImJ_G0034275.1 mouse_genomes_project 8 128373831 128375357 - Ttc13 protein_coding retained_intron MGP_129S1SvImJ_T0090970.1 MGP_129S1SvImJ_G0034275.1 mouse_genomes_project 8 128373975 128378765 - Ttc13 protein_coding retained_intron MGP_129S1SvImJ_T0090971.1 MGP_129S1SvImJ_G0034275.1 mouse_genomes_project 8 128378851 128382343 - Ttc13 protein_coding retained_intron MGP_129S1SvImJ_T0090972.1 MGP_129S1SvImJ_G0034275.1 mouse_genomes_project 8 128379358 128381935 - Ttc13 protein_coding retained_intron MGP_129S1SvImJ_T0090973.1 MGP_129S1SvImJ_G0034275.1 mouse_genomes_project 8 128410607 128426268 - Ttc13 protein_coding retained_intron MGP_129S1SvImJ_T0088184.1 MGP_129S1SvImJ_G0033374.1 mouse_genomes_project 8 10503341 10527978 - MGP_129S1SvImJ_P0088184 Grtp1 protein_coding protein_coding MGP_129S1SvImJ_T0101410.1 MGP_129S1SvImJ_G0039477.1 mouse_genomes_project 8 97855032 97855164 - Gm22780 snoRNA snoRNA MGP_129S1SvImJ_T0016013.1 MGP_129S1SvImJ_G0014102.1 mouse_genomes_project 8 101822246 101822754 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009196.1 MGP_129S1SvImJ_G0007390.1 mouse_genomes_project 8 124528202 124558369 - Fendrr lincRNA lincRNA MGP_129S1SvImJ_T0009197.1 MGP_129S1SvImJ_G0007390.1 mouse_genomes_project 8 124532123 124533734 - Fendrr lincRNA lincRNA MGP_129S1SvImJ_T0009198.1 MGP_129S1SvImJ_G0007390.1 mouse_genomes_project 8 124532439 124558447 - Fendrr lincRNA lincRNA MGP_129S1SvImJ_T0088499.1 MGP_129S1SvImJ_G0033494.1 mouse_genomes_project 8 24083469 24107520 - MGP_129S1SvImJ_P0088499 Fnta protein_coding protein_coding MGP_129S1SvImJ_T0018529.1 MGP_129S1SvImJ_G0015728.1 mouse_genomes_project 8 128543953 128573320 + Gm16163 processed_transcript processed_transcript MGP_129S1SvImJ_T0089444.1 MGP_129S1SvImJ_G0033783.1 mouse_genomes_project 8 72958509 72976166 - MGP_129S1SvImJ_P0089444 Cherp protein_coding protein_coding MGP_129S1SvImJ_T0011002.1 MGP_129S1SvImJ_G0009118.1 mouse_genomes_project 8 84789279 84789422 - Gm44330 miRNA miRNA MGP_129S1SvImJ_T0088779.1 MGP_129S1SvImJ_G0033585.1 mouse_genomes_project 8 45243622 45265105 + MGP_129S1SvImJ_P0088779 protein_coding protein_coding MGP_129S1SvImJ_T0088780.1 MGP_129S1SvImJ_G0033585.1 mouse_genomes_project 8 45258518 45291480 + MGP_129S1SvImJ_P0088780 protein_coding protein_coding MGP_129S1SvImJ_T0088781.1 MGP_129S1SvImJ_G0033585.1 mouse_genomes_project 8 45258559 45265709 + protein_coding processed_transcript MGP_129S1SvImJ_T0088782.1 MGP_129S1SvImJ_G0033585.1 mouse_genomes_project 8 45258582 45265354 + MGP_129S1SvImJ_P0088782 protein_coding protein_coding MGP_129S1SvImJ_T0088783.1 MGP_129S1SvImJ_G0033585.1 mouse_genomes_project 8 45258602 45291476 + MGP_129S1SvImJ_P0088783 protein_coding protein_coding MGP_129S1SvImJ_T0088784.1 MGP_129S1SvImJ_G0033585.1 mouse_genomes_project 8 45264231 45291478 + MGP_129S1SvImJ_P0088784 protein_coding protein_coding MGP_129S1SvImJ_T0090978.1 MGP_129S1SvImJ_G0034279.1 mouse_genomes_project 8 128551610 128572646 - MGP_129S1SvImJ_P0090978 2810004N23Rik protein_coding protein_coding MGP_129S1SvImJ_T0088446.1 MGP_129S1SvImJ_G0033481.1 mouse_genomes_project 8 23559097 23603207 + MGP_129S1SvImJ_P0088446 Fgfr1 protein_coding protein_coding MGP_129S1SvImJ_T0088447.1 MGP_129S1SvImJ_G0033481.1 mouse_genomes_project 8 23564213 23626351 + MGP_129S1SvImJ_P0088447 Fgfr1 protein_coding protein_coding MGP_129S1SvImJ_T0088448.1 MGP_129S1SvImJ_G0033481.1 mouse_genomes_project 8 23564213 23626351 + MGP_129S1SvImJ_P0088448 Fgfr1 protein_coding protein_coding MGP_129S1SvImJ_T0088449.1 MGP_129S1SvImJ_G0033481.1 mouse_genomes_project 8 23564233 23626351 + MGP_129S1SvImJ_P0088449 Fgfr1 protein_coding protein_coding MGP_129S1SvImJ_T0088450.1 MGP_129S1SvImJ_G0033481.1 mouse_genomes_project 8 23564236 23625417 + MGP_129S1SvImJ_P0088450 Fgfr1 protein_coding protein_coding MGP_129S1SvImJ_T0088451.1 MGP_129S1SvImJ_G0033481.1 mouse_genomes_project 8 23564261 23624906 + MGP_129S1SvImJ_P0088451 Fgfr1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0088452.1 MGP_129S1SvImJ_G0033481.1 mouse_genomes_project 8 23564336 23603297 + Fgfr1 protein_coding processed_transcript MGP_129S1SvImJ_T0088453.1 MGP_129S1SvImJ_G0033481.1 mouse_genomes_project 8 23564760 23625415 + MGP_129S1SvImJ_P0088453 Fgfr1 protein_coding protein_coding MGP_129S1SvImJ_T0088454.1 MGP_129S1SvImJ_G0033481.1 mouse_genomes_project 8 23565280 23603368 + MGP_129S1SvImJ_P0088454 Fgfr1 protein_coding protein_coding MGP_129S1SvImJ_T0088455.1 MGP_129S1SvImJ_G0033481.1 mouse_genomes_project 8 23578756 23625213 + MGP_129S1SvImJ_P0088455 Fgfr1 protein_coding protein_coding MGP_129S1SvImJ_T0088456.1 MGP_129S1SvImJ_G0033481.1 mouse_genomes_project 8 23603255 23619329 + Fgfr1 protein_coding processed_transcript MGP_129S1SvImJ_T0088457.1 MGP_129S1SvImJ_G0033481.1 mouse_genomes_project 8 23605712 23611333 + Fgfr1 protein_coding retained_intron MGP_129S1SvImJ_T0088458.1 MGP_129S1SvImJ_G0033481.1 mouse_genomes_project 8 23611023 23625421 + Fgfr1 protein_coding retained_intron MGP_129S1SvImJ_T0088459.1 MGP_129S1SvImJ_G0033481.1 mouse_genomes_project 8 23614468 23625420 + Fgfr1 protein_coding retained_intron MGP_129S1SvImJ_T0088460.1 MGP_129S1SvImJ_G0033481.1 mouse_genomes_project 8 23618608 23623031 + Fgfr1 protein_coding retained_intron MGP_129S1SvImJ_T0088461.1 MGP_129S1SvImJ_G0033481.1 mouse_genomes_project 8 23618845 23623093 + Fgfr1 protein_coding retained_intron MGP_129S1SvImJ_T0090177.1 MGP_129S1SvImJ_G0034019.1 mouse_genomes_project 8 106998045 107008514 + MGP_129S1SvImJ_P0090177 Ces2b protein_coding protein_coding MGP_129S1SvImJ_T0090178.1 MGP_129S1SvImJ_G0034019.1 mouse_genomes_project 8 106998074 107027356 + MGP_129S1SvImJ_P0090178 Ces2b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0101383.1 MGP_129S1SvImJ_G0039450.1 mouse_genomes_project 8 46609825 46609959 + Gm22857 snoRNA snoRNA MGP_129S1SvImJ_T0005414.1 MGP_129S1SvImJ_G0004589.1 mouse_genomes_project 8 117691251 117700812 - Gm16118 antisense antisense MGP_129S1SvImJ_T0089678.1 MGP_129S1SvImJ_G0033864.1 mouse_genomes_project 8 85568761 85570281 - MGP_129S1SvImJ_P0089678 Ier2 protein_coding protein_coding MGP_129S1SvImJ_T0090617.1 MGP_129S1SvImJ_G0034179.1 mouse_genomes_project 8 122643030 122649476 + MGP_129S1SvImJ_P0090617 Hsbp1 protein_coding protein_coding MGP_129S1SvImJ_T0015963.1 MGP_129S1SvImJ_G0014052.1 mouse_genomes_project 8 17163612 17164203 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010974.1 MGP_129S1SvImJ_G0009090.1 mouse_genomes_project 8 13545931 13546013 - Mir3106 miRNA miRNA MGP_129S1SvImJ_T0090767.1 MGP_129S1SvImJ_G0034218.1 mouse_genomes_project 8 125438343 125468634 - MGP_129S1SvImJ_P0090767 Car5a protein_coding protein_coding MGP_129S1SvImJ_T0090768.1 MGP_129S1SvImJ_G0034218.1 mouse_genomes_project 8 125440040 125450868 - Car5a protein_coding processed_transcript MGP_129S1SvImJ_T0101385.1 MGP_129S1SvImJ_G0039452.1 mouse_genomes_project 8 52551653 52551769 + Gm23666 snoRNA snoRNA MGP_129S1SvImJ_T0088893.1 MGP_129S1SvImJ_G0033624.1 mouse_genomes_project 8 57245537 57251447 + MGP_129S1SvImJ_P0088893 Hmgb2 protein_coding protein_coding MGP_129S1SvImJ_T0090424.1 MGP_129S1SvImJ_G0034112.1 mouse_genomes_project 8 112319325 112338750 + MGP_129S1SvImJ_P0090424 Zfp821 protein_coding protein_coding MGP_129S1SvImJ_T0088633.1 MGP_129S1SvImJ_G0033548.1 mouse_genomes_project 8 37801550 37945560 + MGP_129S1SvImJ_P0088633 Tusc3 protein_coding protein_coding MGP_129S1SvImJ_T0089821.1 MGP_129S1SvImJ_G0033899.1 mouse_genomes_project 8 86222248 86232760 + MGP_129S1SvImJ_P0089821 Orc6 protein_coding protein_coding MGP_129S1SvImJ_T0089822.1 MGP_129S1SvImJ_G0033899.1 mouse_genomes_project 8 86222248 86232760 + MGP_129S1SvImJ_P0089822 Orc6 protein_coding protein_coding MGP_129S1SvImJ_T0090034.1 MGP_129S1SvImJ_G0033967.1 mouse_genomes_project 8 96182773 96188846 + MGP_129S1SvImJ_P0090034 Ccl22 protein_coding protein_coding MGP_129S1SvImJ_T0090035.1 MGP_129S1SvImJ_G0033967.1 mouse_genomes_project 8 96182863 96187020 + Ccl22 protein_coding processed_transcript MGP_129S1SvImJ_T0090275.1 MGP_129S1SvImJ_G0034056.1 mouse_genomes_project 8 108006958 108011237 - MGP_129S1SvImJ_P0090275 Enkd1 protein_coding protein_coding MGP_129S1SvImJ_T0005362.1 MGP_129S1SvImJ_G0004546.1 mouse_genomes_project 8 20677959 20681750 + 1700041G16Rik antisense antisense MGP_129S1SvImJ_T0005363.1 MGP_129S1SvImJ_G0004546.1 mouse_genomes_project 8 20680491 20680949 + 1700041G16Rik antisense antisense MGP_129S1SvImJ_T0090193.1 MGP_129S1SvImJ_G0034027.1 mouse_genomes_project 8 107380273 107404042 + MGP_129S1SvImJ_P0090193 Ces4a protein_coding protein_coding MGP_129S1SvImJ_T0005397.1 MGP_129S1SvImJ_G0004575.1 mouse_genomes_project 8 100680575 100701368 + Gm15679 antisense antisense MGP_129S1SvImJ_T0088687.1 MGP_129S1SvImJ_G0033560.1 mouse_genomes_project 8 40028131 40050990 - MGP_129S1SvImJ_P0088687 Fgl1 protein_coding protein_coding MGP_129S1SvImJ_T0088688.1 MGP_129S1SvImJ_G0033560.1 mouse_genomes_project 8 40034311 40050987 - Fgl1 protein_coding retained_intron MGP_129S1SvImJ_T0089904.1 MGP_129S1SvImJ_G0033922.1 mouse_genomes_project 8 89739100 89782033 + MGP_129S1SvImJ_P0089904 Nod2 protein_coding protein_coding MGP_129S1SvImJ_T0089905.1 MGP_129S1SvImJ_G0033922.1 mouse_genomes_project 8 89739169 89758571 + Nod2 protein_coding retained_intron MGP_129S1SvImJ_T0089906.1 MGP_129S1SvImJ_G0033922.1 mouse_genomes_project 8 89739367 89787162 + MGP_129S1SvImJ_P0089906 Nod2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089907.1 MGP_129S1SvImJ_G0033922.1 mouse_genomes_project 8 89744022 89782032 + MGP_129S1SvImJ_P0089907 Nod2 protein_coding protein_coding MGP_129S1SvImJ_T0090628.1 MGP_129S1SvImJ_G0034183.1 mouse_genomes_project 8 122793092 122828666 - MGP_129S1SvImJ_P0090628 Slc38a8 protein_coding protein_coding MGP_129S1SvImJ_T0090629.1 MGP_129S1SvImJ_G0034183.1 mouse_genomes_project 8 122799011 122817383 - MGP_129S1SvImJ_P0090629 Slc38a8 protein_coding protein_coding MGP_129S1SvImJ_T0090630.1 MGP_129S1SvImJ_G0034183.1 mouse_genomes_project 8 122799589 122813412 - Slc38a8 protein_coding retained_intron MGP_129S1SvImJ_T0090631.1 MGP_129S1SvImJ_G0034183.1 mouse_genomes_project 8 122812716 122828262 - MGP_129S1SvImJ_P0090631 Slc38a8 protein_coding protein_coding MGP_129S1SvImJ_T0090632.1 MGP_129S1SvImJ_G0034183.1 mouse_genomes_project 8 122816480 122828663 - MGP_129S1SvImJ_P0090632 Slc38a8 protein_coding protein_coding MGP_129S1SvImJ_T0089494.1 MGP_129S1SvImJ_G0033801.1 mouse_genomes_project 8 78135764 78168063 + MGP_129S1SvImJ_P0089494 Prmt9 protein_coding protein_coding MGP_129S1SvImJ_T0089495.1 MGP_129S1SvImJ_G0033801.1 mouse_genomes_project 8 78135774 78150269 + Prmt9 protein_coding retained_intron MGP_129S1SvImJ_T0089496.1 MGP_129S1SvImJ_G0033801.1 mouse_genomes_project 8 78135777 78168063 + MGP_129S1SvImJ_P0089496 Prmt9 protein_coding protein_coding MGP_129S1SvImJ_T0089497.1 MGP_129S1SvImJ_G0033801.1 mouse_genomes_project 8 78149952 78151384 + Prmt9 protein_coding retained_intron MGP_129S1SvImJ_T0088483.1 MGP_129S1SvImJ_G0033485.1 mouse_genomes_project 8 23792254 23821247 - MGP_129S1SvImJ_P0088483 Ddhd2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089462.1 MGP_129S1SvImJ_G0033791.1 mouse_genomes_project 8 73316097 73861306 - MGP_129S1SvImJ_P0089462 Large protein_coding protein_coding MGP_129S1SvImJ_T0089463.1 MGP_129S1SvImJ_G0033791.1 mouse_genomes_project 8 73316097 73860322 - MGP_129S1SvImJ_P0089463 Large protein_coding protein_coding MGP_129S1SvImJ_T0089464.1 MGP_129S1SvImJ_G0033791.1 mouse_genomes_project 8 73540043 73600131 - Large protein_coding retained_intron MGP_129S1SvImJ_T0088037.1 MGP_129S1SvImJ_G0033329.1 mouse_genomes_project 8 1233598 1236808 + MGP_129S1SvImJ_P0088037 Tgfbr3l protein_coding protein_coding MGP_129S1SvImJ_T0088038.1 MGP_129S1SvImJ_G0033329.1 mouse_genomes_project 8 1234017 1234906 + Tgfbr3l protein_coding processed_transcript MGP_129S1SvImJ_T0088039.1 MGP_129S1SvImJ_G0033329.1 mouse_genomes_project 8 1235713 1236808 + Tgfbr3l protein_coding processed_transcript MGP_129S1SvImJ_T0089383.1 MGP_129S1SvImJ_G0033762.1 mouse_genomes_project 8 72105648 72117733 - MGP_129S1SvImJ_P0089383 B3gnt3 protein_coding protein_coding MGP_129S1SvImJ_T0088216.1 MGP_129S1SvImJ_G0033386.1 mouse_genomes_project 8 11120105 11149169 + MGP_129S1SvImJ_P0088216 Cdc16 protein_coding protein_coding MGP_129S1SvImJ_T0088217.1 MGP_129S1SvImJ_G0033386.1 mouse_genomes_project 8 11120106 11125490 + Cdc16 protein_coding processed_transcript MGP_129S1SvImJ_T0088218.1 MGP_129S1SvImJ_G0033386.1 mouse_genomes_project 8 11120144 11128940 + Cdc16 protein_coding processed_transcript MGP_129S1SvImJ_T0088219.1 MGP_129S1SvImJ_G0033386.1 mouse_genomes_project 8 11121196 11125493 + Cdc16 protein_coding retained_intron MGP_129S1SvImJ_T0088220.1 MGP_129S1SvImJ_G0033386.1 mouse_genomes_project 8 11146232 11149169 + Cdc16 protein_coding retained_intron MGP_129S1SvImJ_T0009212.1 MGP_129S1SvImJ_G0007401.1 mouse_genomes_project 8 127359026 127377544 - lincRNA lincRNA MGP_129S1SvImJ_T0089377.1 MGP_129S1SvImJ_G0033760.1 mouse_genomes_project 8 72089364 72104485 + MGP_129S1SvImJ_P0089377 Jak3 protein_coding protein_coding MGP_129S1SvImJ_T0089378.1 MGP_129S1SvImJ_G0033760.1 mouse_genomes_project 8 72089364 72102465 + MGP_129S1SvImJ_P0089378 Jak3 protein_coding protein_coding MGP_129S1SvImJ_T0089379.1 MGP_129S1SvImJ_G0033760.1 mouse_genomes_project 8 72089620 72094235 + Jak3 protein_coding retained_intron MGP_129S1SvImJ_T0089380.1 MGP_129S1SvImJ_G0033760.1 mouse_genomes_project 8 72090617 72102467 + MGP_129S1SvImJ_P0089380 Jak3 protein_coding protein_coding MGP_129S1SvImJ_T0089381.1 MGP_129S1SvImJ_G0033760.1 mouse_genomes_project 8 72091401 72104134 + Jak3 protein_coding retained_intron MGP_129S1SvImJ_T0090011.1 MGP_129S1SvImJ_G0033960.1 mouse_genomes_project 8 95807061 95815996 + MGP_129S1SvImJ_P0090011 Herpud1 protein_coding protein_coding MGP_129S1SvImJ_T0090012.1 MGP_129S1SvImJ_G0033960.1 mouse_genomes_project 8 95807118 95815977 + MGP_129S1SvImJ_P0090012 Herpud1 protein_coding protein_coding MGP_129S1SvImJ_T0090013.1 MGP_129S1SvImJ_G0033960.1 mouse_genomes_project 8 95808176 95813089 + Herpud1 protein_coding processed_transcript MGP_129S1SvImJ_T0090014.1 MGP_129S1SvImJ_G0033960.1 mouse_genomes_project 8 95808222 95812929 + Herpud1 protein_coding processed_transcript MGP_129S1SvImJ_T0090015.1 MGP_129S1SvImJ_G0033960.1 mouse_genomes_project 8 95814153 95815528 + Herpud1 protein_coding retained_intron MGP_129S1SvImJ_T0088106.1 MGP_129S1SvImJ_G0033358.1 mouse_genomes_project 8 8893250 8924690 - MGP_129S1SvImJ_P0088106 1700016D06Rik protein_coding protein_coding MGP_129S1SvImJ_T0088107.1 MGP_129S1SvImJ_G0033358.1 mouse_genomes_project 8 8893804 8899016 - 1700016D06Rik protein_coding processed_transcript MGP_129S1SvImJ_T0088108.1 MGP_129S1SvImJ_G0033358.1 mouse_genomes_project 8 8893805 8946736 - MGP_129S1SvImJ_P0088108 1700016D06Rik protein_coding protein_coding MGP_129S1SvImJ_T0088109.1 MGP_129S1SvImJ_G0033358.1 mouse_genomes_project 8 8893806 8900875 - MGP_129S1SvImJ_P0088109 1700016D06Rik protein_coding protein_coding MGP_129S1SvImJ_T0088602.1 MGP_129S1SvImJ_G0033533.1 mouse_genomes_project 8 32661268 32677592 + MGP_129S1SvImJ_P0088602 Saraf protein_coding protein_coding MGP_129S1SvImJ_T0011037.1 MGP_129S1SvImJ_G0009153.1 mouse_genomes_project 8 113761339 113761416 - Gm24103 miRNA miRNA MGP_129S1SvImJ_T0090392.1 MGP_129S1SvImJ_G0034100.1 mouse_genomes_project 8 109844404 109859363 - MGP_129S1SvImJ_P0090392 Nqo1 protein_coding protein_coding MGP_129S1SvImJ_T0088263.1 MGP_129S1SvImJ_G0033401.1 mouse_genomes_project 8 12490962 12569280 + MGP_129S1SvImJ_P0088263 Myom2 protein_coding protein_coding MGP_129S1SvImJ_T0088264.1 MGP_129S1SvImJ_G0033401.1 mouse_genomes_project 8 12492154 12497144 + Myom2 protein_coding processed_transcript MGP_129S1SvImJ_T0088265.1 MGP_129S1SvImJ_G0033401.1 mouse_genomes_project 8 12493363 12508276 + Myom2 protein_coding retained_intron MGP_129S1SvImJ_T0088266.1 MGP_129S1SvImJ_G0033401.1 mouse_genomes_project 8 12537715 12542766 + Myom2 protein_coding retained_intron MGP_129S1SvImJ_T0088267.1 MGP_129S1SvImJ_G0033401.1 mouse_genomes_project 8 12554849 12566923 + Myom2 protein_coding processed_transcript MGP_129S1SvImJ_T0088700.1 MGP_129S1SvImJ_G0033567.1 mouse_genomes_project 8 42607531 42610279 - MGP_129S1SvImJ_P0088700 protein_coding protein_coding MGP_129S1SvImJ_T0009092.1 MGP_129S1SvImJ_G0007312.1 mouse_genomes_project 8 28910030 28920710 + 4933433F19Rik lincRNA lincRNA MGP_129S1SvImJ_T0090544.1 MGP_129S1SvImJ_G0034151.1 mouse_genomes_project 8 114805025 114833080 - MGP_129S1SvImJ_P0090544 Adat1 protein_coding protein_coding MGP_129S1SvImJ_T0090545.1 MGP_129S1SvImJ_G0034151.1 mouse_genomes_project 8 114811728 114833027 - MGP_129S1SvImJ_P0090545 Adat1 protein_coding protein_coding MGP_129S1SvImJ_T0088370.1 MGP_129S1SvImJ_G0033458.1 mouse_genomes_project 8 20616685 20647668 + MGP_129S1SvImJ_P0088370 Plat protein_coding protein_coding MGP_129S1SvImJ_T0011749.1 MGP_129S1SvImJ_G0009865.1 mouse_genomes_project 8 115456293 115456398 + Gm22664 misc_RNA misc_RNA MGP_129S1SvImJ_T0016022.1 MGP_129S1SvImJ_G0014111.1 mouse_genomes_project 8 127645648 127646339 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0089527.1 MGP_129S1SvImJ_G0033812.1 mouse_genomes_project 8 79998830 80061529 - MGP_129S1SvImJ_P0089527 Smad1 protein_coding protein_coding MGP_129S1SvImJ_T0089528.1 MGP_129S1SvImJ_G0033812.1 mouse_genomes_project 8 80002011 80061529 - MGP_129S1SvImJ_P0089528 Smad1 protein_coding protein_coding MGP_129S1SvImJ_T0089529.1 MGP_129S1SvImJ_G0033812.1 mouse_genomes_project 8 80015787 80061529 - MGP_129S1SvImJ_P0089529 Smad1 protein_coding protein_coding MGP_129S1SvImJ_T0005398.1 MGP_129S1SvImJ_G0004576.1 mouse_genomes_project 8 106285914 106292695 - Gm10631 antisense antisense MGP_129S1SvImJ_T0090538.1 MGP_129S1SvImJ_G0034146.1 mouse_genomes_project 8 114584775 114674987 - MGP_129S1SvImJ_P0090538 Cfdp1 protein_coding protein_coding MGP_129S1SvImJ_T0099050.1 MGP_129S1SvImJ_G0037118.1 mouse_genomes_project 8 9676103 9732347 + Gm5607 sense_overlapping sense_overlapping MGP_129S1SvImJ_T0099051.1 MGP_129S1SvImJ_G0037118.1 mouse_genomes_project 8 9676103 9732368 + Gm5607 sense_overlapping sense_overlapping MGP_129S1SvImJ_T0089590.1 MGP_129S1SvImJ_G0033838.1 mouse_genomes_project 8 84509265 84542294 - MGP_129S1SvImJ_P0089590 Pkn1 protein_coding protein_coding MGP_129S1SvImJ_T0089591.1 MGP_129S1SvImJ_G0033838.1 mouse_genomes_project 8 84509594 84537187 - MGP_129S1SvImJ_P0089591 Pkn1 protein_coding protein_coding MGP_129S1SvImJ_T0089592.1 MGP_129S1SvImJ_G0033838.1 mouse_genomes_project 8 84509602 84542212 - MGP_129S1SvImJ_P0089592 Pkn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089593.1 MGP_129S1SvImJ_G0033838.1 mouse_genomes_project 8 84509630 84515034 - Pkn1 protein_coding retained_intron MGP_129S1SvImJ_T0089594.1 MGP_129S1SvImJ_G0033838.1 mouse_genomes_project 8 84510090 84511284 - Pkn1 protein_coding processed_transcript MGP_129S1SvImJ_T0089595.1 MGP_129S1SvImJ_G0033838.1 mouse_genomes_project 8 84512530 84513097 - Pkn1 protein_coding retained_intron MGP_129S1SvImJ_T0089596.1 MGP_129S1SvImJ_G0033838.1 mouse_genomes_project 8 84512983 84517274 - Pkn1 protein_coding processed_transcript MGP_129S1SvImJ_T0089597.1 MGP_129S1SvImJ_G0033838.1 mouse_genomes_project 8 84517222 84521073 - Pkn1 protein_coding retained_intron MGP_129S1SvImJ_T0089598.1 MGP_129S1SvImJ_G0033838.1 mouse_genomes_project 8 84533042 84542282 - Pkn1 protein_coding retained_intron MGP_129S1SvImJ_T0011726.1 MGP_129S1SvImJ_G0009842.1 mouse_genomes_project 8 560574 560901 + Gm22204 misc_RNA misc_RNA MGP_129S1SvImJ_T0089432.1 MGP_129S1SvImJ_G0033778.1 mouse_genomes_project 8 72713040 72730245 + MGP_129S1SvImJ_P0089432 Ap1m1 protein_coding protein_coding MGP_129S1SvImJ_T0089433.1 MGP_129S1SvImJ_G0033778.1 mouse_genomes_project 8 72713132 72722938 + MGP_129S1SvImJ_P0089433 Ap1m1 protein_coding protein_coding MGP_129S1SvImJ_T0089434.1 MGP_129S1SvImJ_G0033778.1 mouse_genomes_project 8 72713345 72724874 + MGP_129S1SvImJ_P0089434 Ap1m1 protein_coding protein_coding MGP_129S1SvImJ_T0089435.1 MGP_129S1SvImJ_G0033778.1 mouse_genomes_project 8 72725913 72729467 + Ap1m1 protein_coding retained_intron MGP_129S1SvImJ_T0089436.1 MGP_129S1SvImJ_G0033778.1 mouse_genomes_project 8 72725993 72729773 + Ap1m1 protein_coding retained_intron MGP_129S1SvImJ_T0089578.1 MGP_129S1SvImJ_G0033831.1 mouse_genomes_project 8 84196321 84237978 + MGP_129S1SvImJ_P0089578 Clgn protein_coding protein_coding MGP_129S1SvImJ_T0089579.1 MGP_129S1SvImJ_G0033831.1 mouse_genomes_project 8 84196332 84236257 + MGP_129S1SvImJ_P0089579 Clgn protein_coding protein_coding MGP_129S1SvImJ_T0088937.1 MGP_129S1SvImJ_G0033634.1 mouse_genomes_project 8 61132767 61315412 + MGP_129S1SvImJ_P0088937 Sh3rf1 protein_coding protein_coding MGP_129S1SvImJ_T0088605.1 MGP_129S1SvImJ_G0033536.1 mouse_genomes_project 8 33381913 33523690 - MGP_129S1SvImJ_P0088605 Tnks protein_coding protein_coding MGP_129S1SvImJ_T0090460.1 MGP_129S1SvImJ_G0034129.1 mouse_genomes_project 8 113537299 113544006 + MGP_129S1SvImJ_P0090460 Cog4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090461.1 MGP_129S1SvImJ_G0034129.1 mouse_genomes_project 8 113537309 113542623 + MGP_129S1SvImJ_P0090461 Cog4 protein_coding protein_coding MGP_129S1SvImJ_T0090462.1 MGP_129S1SvImJ_G0034129.1 mouse_genomes_project 8 113537314 113540551 + Cog4 protein_coding retained_intron MGP_129S1SvImJ_T0090463.1 MGP_129S1SvImJ_G0034129.1 mouse_genomes_project 8 113537326 113544070 + Cog4 protein_coding processed_transcript MGP_129S1SvImJ_T0090464.1 MGP_129S1SvImJ_G0034129.1 mouse_genomes_project 8 113537326 113544061 + MGP_129S1SvImJ_P0090464 Cog4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090465.1 MGP_129S1SvImJ_G0034129.1 mouse_genomes_project 8 113537326 113573939 + MGP_129S1SvImJ_P0090465 Cog4 protein_coding protein_coding MGP_129S1SvImJ_T0090466.1 MGP_129S1SvImJ_G0034129.1 mouse_genomes_project 8 113537326 113544107 + MGP_129S1SvImJ_P0090466 Cog4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090467.1 MGP_129S1SvImJ_G0034129.1 mouse_genomes_project 8 113537329 113573572 + MGP_129S1SvImJ_P0090467 Cog4 protein_coding protein_coding MGP_129S1SvImJ_T0090468.1 MGP_129S1SvImJ_G0034129.1 mouse_genomes_project 8 113540148 113573928 + MGP_129S1SvImJ_P0090468 Cog4 protein_coding protein_coding MGP_129S1SvImJ_T0090469.1 MGP_129S1SvImJ_G0034129.1 mouse_genomes_project 8 113549956 113560152 + Cog4 protein_coding retained_intron MGP_129S1SvImJ_T0090470.1 MGP_129S1SvImJ_G0034129.1 mouse_genomes_project 8 113550111 113573572 + MGP_129S1SvImJ_P0090470 Cog4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090471.1 MGP_129S1SvImJ_G0034129.1 mouse_genomes_project 8 113554828 113558383 + Cog4 protein_coding retained_intron MGP_129S1SvImJ_T0090472.1 MGP_129S1SvImJ_G0034129.1 mouse_genomes_project 8 113572718 113573463 + Cog4 protein_coding retained_intron MGP_129S1SvImJ_T0011036.1 MGP_129S1SvImJ_G0009152.1 mouse_genomes_project 8 113725667 113725748 - Mir3473d miRNA miRNA MGP_129S1SvImJ_T0101421.1 MGP_129S1SvImJ_G0039488.1 mouse_genomes_project 8 125191189 125191268 - Gm23299 snoRNA snoRNA MGP_129S1SvImJ_T0089805.1 MGP_129S1SvImJ_G0033893.1 mouse_genomes_project 8 86022964 86028572 - Wdr83 protein_coding retained_intron MGP_129S1SvImJ_T0089806.1 MGP_129S1SvImJ_G0033893.1 mouse_genomes_project 8 86022964 86028501 - Wdr83 protein_coding retained_intron MGP_129S1SvImJ_T0089807.1 MGP_129S1SvImJ_G0033893.1 mouse_genomes_project 8 86022964 86028615 - MGP_129S1SvImJ_P0089807 Wdr83 protein_coding protein_coding MGP_129S1SvImJ_T0089808.1 MGP_129S1SvImJ_G0033893.1 mouse_genomes_project 8 86022965 86027784 - Wdr83 protein_coding retained_intron MGP_129S1SvImJ_T0089809.1 MGP_129S1SvImJ_G0033893.1 mouse_genomes_project 8 86022966 86024037 - MGP_129S1SvImJ_P0089809 Wdr83 protein_coding protein_coding MGP_129S1SvImJ_T0089810.1 MGP_129S1SvImJ_G0033893.1 mouse_genomes_project 8 86022967 86024221 - Wdr83 protein_coding retained_intron MGP_129S1SvImJ_T0089811.1 MGP_129S1SvImJ_G0033893.1 mouse_genomes_project 8 86022981 86029172 - Wdr83 protein_coding retained_intron MGP_129S1SvImJ_T0089812.1 MGP_129S1SvImJ_G0033893.1 mouse_genomes_project 8 86023757 86028542 - MGP_129S1SvImJ_P0089812 Wdr83 protein_coding protein_coding MGP_129S1SvImJ_T0089813.1 MGP_129S1SvImJ_G0033893.1 mouse_genomes_project 8 86024053 86028543 - MGP_129S1SvImJ_P0089813 Wdr83 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089814.1 MGP_129S1SvImJ_G0033893.1 mouse_genomes_project 8 86027563 86028538 - Wdr83 protein_coding retained_intron MGP_129S1SvImJ_T0088344.1 MGP_129S1SvImJ_G0033448.1 mouse_genomes_project 8 20072517 20108910 + MGP_129S1SvImJ_P0088344 Thsd1 protein_coding protein_coding MGP_129S1SvImJ_T0088345.1 MGP_129S1SvImJ_G0033448.1 mouse_genomes_project 8 20072549 20107956 + MGP_129S1SvImJ_P0088345 Thsd1 protein_coding protein_coding MGP_129S1SvImJ_T0088346.1 MGP_129S1SvImJ_G0033448.1 mouse_genomes_project 8 20072566 20107954 + Thsd1 protein_coding processed_transcript MGP_129S1SvImJ_T0090089.1 MGP_129S1SvImJ_G0033983.1 mouse_genomes_project 8 96807905 96813722 - MGP_129S1SvImJ_P0090089 Zfp319 protein_coding protein_coding MGP_129S1SvImJ_T0101402.1 MGP_129S1SvImJ_G0039469.1 mouse_genomes_project 8 85272505 85272638 - Gm23626 snoRNA snoRNA MGP_129S1SvImJ_T0089242.1 MGP_129S1SvImJ_G0033715.1 mouse_genomes_project 8 70892503 70896549 + MGP_129S1SvImJ_P0089242 Lrrc25 protein_coding protein_coding MGP_129S1SvImJ_T0090154.1 MGP_129S1SvImJ_G0034012.1 mouse_genomes_project 8 106649730 106663884 - Nae1 protein_coding processed_transcript MGP_129S1SvImJ_T0090155.1 MGP_129S1SvImJ_G0034012.1 mouse_genomes_project 8 106649730 106676006 - MGP_129S1SvImJ_P0090155 Nae1 protein_coding protein_coding MGP_129S1SvImJ_T0090156.1 MGP_129S1SvImJ_G0034012.1 mouse_genomes_project 8 106649730 106676005 - MGP_129S1SvImJ_P0090156 Nae1 protein_coding protein_coding MGP_129S1SvImJ_T0090157.1 MGP_129S1SvImJ_G0034012.1 mouse_genomes_project 8 106649736 106656994 - Nae1 protein_coding retained_intron MGP_129S1SvImJ_T0090158.1 MGP_129S1SvImJ_G0034012.1 mouse_genomes_project 8 106649739 106658048 - Nae1 protein_coding retained_intron MGP_129S1SvImJ_T0090159.1 MGP_129S1SvImJ_G0034012.1 mouse_genomes_project 8 106651896 106657054 - Nae1 protein_coding retained_intron MGP_129S1SvImJ_T0090160.1 MGP_129S1SvImJ_G0034012.1 mouse_genomes_project 8 106657541 106668618 - Nae1 protein_coding retained_intron MGP_129S1SvImJ_T0090161.1 MGP_129S1SvImJ_G0034012.1 mouse_genomes_project 8 106659790 106663916 - Nae1 protein_coding retained_intron MGP_129S1SvImJ_T0090162.1 MGP_129S1SvImJ_G0034012.1 mouse_genomes_project 8 106663607 106675957 - Nae1 protein_coding retained_intron MGP_129S1SvImJ_T0090163.1 MGP_129S1SvImJ_G0034012.1 mouse_genomes_project 8 106664036 106668037 - Nae1 protein_coding retained_intron MGP_129S1SvImJ_T0090164.1 MGP_129S1SvImJ_G0034012.1 mouse_genomes_project 8 106668732 106675983 - Nae1 protein_coding retained_intron MGP_129S1SvImJ_T0101422.1 MGP_129S1SvImJ_G0039489.1 mouse_genomes_project 8 130804959 130805093 - Gm26397 snoRNA snoRNA MGP_129S1SvImJ_T0089197.1 MGP_129S1SvImJ_G0033705.1 mouse_genomes_project 8 70718522 70745437 - MGP_129S1SvImJ_P0089197 Klhl26 protein_coding protein_coding MGP_129S1SvImJ_T0089198.1 MGP_129S1SvImJ_G0033705.1 mouse_genomes_project 8 70718522 70745437 - MGP_129S1SvImJ_P0089198 Klhl26 protein_coding protein_coding MGP_129S1SvImJ_T0090410.1 MGP_129S1SvImJ_G0034109.1 mouse_genomes_project 8 112193344 112211232 - MGP_129S1SvImJ_P0090410 Dhodh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090411.1 MGP_129S1SvImJ_G0034109.1 mouse_genomes_project 8 112195248 112196053 - Dhodh protein_coding processed_transcript MGP_129S1SvImJ_T0090412.1 MGP_129S1SvImJ_G0034109.1 mouse_genomes_project 8 112195474 112213372 - MGP_129S1SvImJ_P0090412 Dhodh protein_coding protein_coding MGP_129S1SvImJ_T0090413.1 MGP_129S1SvImJ_G0034109.1 mouse_genomes_project 8 112195478 112213623 - MGP_129S1SvImJ_P0090413 Dhodh protein_coding protein_coding MGP_129S1SvImJ_T0090414.1 MGP_129S1SvImJ_G0034109.1 mouse_genomes_project 8 112195902 112198284 - Dhodh protein_coding retained_intron MGP_129S1SvImJ_T0090415.1 MGP_129S1SvImJ_G0034109.1 mouse_genomes_project 8 112195974 112196952 - Dhodh protein_coding retained_intron MGP_129S1SvImJ_T0090416.1 MGP_129S1SvImJ_G0034109.1 mouse_genomes_project 8 112196047 112203448 - Dhodh protein_coding retained_intron MGP_129S1SvImJ_T0090417.1 MGP_129S1SvImJ_G0034109.1 mouse_genomes_project 8 112198031 112213366 - MGP_129S1SvImJ_P0090417 Dhodh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090418.1 MGP_129S1SvImJ_G0034109.1 mouse_genomes_project 8 112203258 112213420 - Dhodh protein_coding retained_intron MGP_129S1SvImJ_T0090419.1 MGP_129S1SvImJ_G0034109.1 mouse_genomes_project 8 112203267 112213420 - Dhodh protein_coding retained_intron MGP_129S1SvImJ_T0090420.1 MGP_129S1SvImJ_G0034109.1 mouse_genomes_project 8 112205239 112213673 - MGP_129S1SvImJ_P0090420 Dhodh protein_coding protein_coding MGP_129S1SvImJ_T0089738.1 MGP_129S1SvImJ_G0033876.1 mouse_genomes_project 8 85797575 85814098 + MGP_129S1SvImJ_P0089738 Syce2 protein_coding protein_coding MGP_129S1SvImJ_T0089739.1 MGP_129S1SvImJ_G0033876.1 mouse_genomes_project 8 85797575 85814863 + MGP_129S1SvImJ_P0089739 Syce2 protein_coding protein_coding MGP_129S1SvImJ_T0089740.1 MGP_129S1SvImJ_G0033876.1 mouse_genomes_project 8 85797654 85814108 + MGP_129S1SvImJ_P0089740 Syce2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089741.1 MGP_129S1SvImJ_G0033876.1 mouse_genomes_project 8 85797899 85812633 + Syce2 protein_coding retained_intron MGP_129S1SvImJ_T0088697.1 MGP_129S1SvImJ_G0033564.1 mouse_genomes_project 8 42046793 42058288 - MGP_129S1SvImJ_P0088697 Triml1 protein_coding protein_coding MGP_129S1SvImJ_T0089269.1 MGP_129S1SvImJ_G0033728.1 mouse_genomes_project 8 71111568 71124545 + MGP_129S1SvImJ_P0089269 Il12rb1 protein_coding protein_coding MGP_129S1SvImJ_T0090938.1 MGP_129S1SvImJ_G0034264.1 mouse_genomes_project 8 127532834 127535805 - MGP_129S1SvImJ_P0090938 Acta1 protein_coding protein_coding MGP_129S1SvImJ_T0005359.1 MGP_129S1SvImJ_G0004544.1 mouse_genomes_project 8 13814906 13817623 + Gm16347 antisense antisense MGP_129S1SvImJ_T0005360.1 MGP_129S1SvImJ_G0004544.1 mouse_genomes_project 8 13814917 13818760 + Gm16347 antisense antisense MGP_129S1SvImJ_T0016018.1 MGP_129S1SvImJ_G0014107.1 mouse_genomes_project 8 119588485 119591904 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0089445.1 MGP_129S1SvImJ_G0033784.1 mouse_genomes_project 8 72981563 72994807 - MGP_129S1SvImJ_P0089445 Slc35e1 protein_coding protein_coding MGP_129S1SvImJ_T0089446.1 MGP_129S1SvImJ_G0033784.1 mouse_genomes_project 8 72985532 72994410 - MGP_129S1SvImJ_P0089446 Slc35e1 protein_coding protein_coding MGP_129S1SvImJ_T0090832.1 MGP_129S1SvImJ_G0034235.1 mouse_genomes_project 8 126182063 126185328 - MGP_129S1SvImJ_P0090832 Pabpn1l protein_coding protein_coding MGP_129S1SvImJ_T0089350.1 MGP_129S1SvImJ_G0033753.1 mouse_genomes_project 8 71967306 71971877 - MGP_129S1SvImJ_P0089350 Tmem221 protein_coding protein_coding MGP_129S1SvImJ_T0090668.1 MGP_129S1SvImJ_G0034197.1 mouse_genomes_project 8 123460333 123483181 - MGP_129S1SvImJ_P0090668 Zdhhc7 protein_coding protein_coding MGP_129S1SvImJ_T0090669.1 MGP_129S1SvImJ_G0034197.1 mouse_genomes_project 8 123461641 123467109 - Zdhhc7 protein_coding retained_intron MGP_129S1SvImJ_T0090670.1 MGP_129S1SvImJ_G0034197.1 mouse_genomes_project 8 123465495 123468349 - Zdhhc7 protein_coding retained_intron MGP_129S1SvImJ_T0090671.1 MGP_129S1SvImJ_G0034197.1 mouse_genomes_project 8 123465685 123468542 - Zdhhc7 protein_coding retained_intron MGP_129S1SvImJ_T0090672.1 MGP_129S1SvImJ_G0034197.1 mouse_genomes_project 8 123474673 123482771 - Zdhhc7 protein_coding processed_transcript MGP_129S1SvImJ_T0009170.1 MGP_129S1SvImJ_G0007369.1 mouse_genomes_project 8 93657969 93658408 - lincRNA lincRNA MGP_129S1SvImJ_T0090296.1 MGP_129S1SvImJ_G0034068.1 mouse_genomes_project 8 108260886 108263551 - MGP_129S1SvImJ_P0090296 Psmb10 protein_coding protein_coding MGP_129S1SvImJ_T0098395.1 MGP_129S1SvImJ_G0036480.1 mouse_genomes_project 8 96414279 96419351 - pseudogene pseudogene MGP_129S1SvImJ_T0010986.1 MGP_129S1SvImJ_G0009102.1 mouse_genomes_project 8 46765249 46765329 + Gm27409 miRNA miRNA MGP_129S1SvImJ_T0088503.1 MGP_129S1SvImJ_G0033496.1 mouse_genomes_project 8 24214609 24239550 + MGP_129S1SvImJ_P0088503 Rnf170 protein_coding protein_coding MGP_129S1SvImJ_T0088504.1 MGP_129S1SvImJ_G0033496.1 mouse_genomes_project 8 24214619 24237004 + MGP_129S1SvImJ_P0088504 Rnf170 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088505.1 MGP_129S1SvImJ_G0033496.1 mouse_genomes_project 8 24214622 24236803 + MGP_129S1SvImJ_P0088505 Rnf170 protein_coding protein_coding MGP_129S1SvImJ_T0088506.1 MGP_129S1SvImJ_G0033496.1 mouse_genomes_project 8 24214627 24224384 + MGP_129S1SvImJ_P0088506 Rnf170 protein_coding protein_coding MGP_129S1SvImJ_T0088507.1 MGP_129S1SvImJ_G0033496.1 mouse_genomes_project 8 24214715 24224775 + MGP_129S1SvImJ_P0088507 Rnf170 protein_coding protein_coding MGP_129S1SvImJ_T0088508.1 MGP_129S1SvImJ_G0033496.1 mouse_genomes_project 8 24214805 24238327 + MGP_129S1SvImJ_P0088508 Rnf170 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088509.1 MGP_129S1SvImJ_G0033496.1 mouse_genomes_project 8 24214903 24224384 + MGP_129S1SvImJ_P0088509 Rnf170 protein_coding protein_coding MGP_129S1SvImJ_T0088510.1 MGP_129S1SvImJ_G0033496.1 mouse_genomes_project 8 24215719 24221470 + MGP_129S1SvImJ_P0088510 Rnf170 protein_coding protein_coding MGP_129S1SvImJ_T0088511.1 MGP_129S1SvImJ_G0033496.1 mouse_genomes_project 8 24219108 24236757 + MGP_129S1SvImJ_P0088511 Rnf170 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0100107.1 MGP_129S1SvImJ_G0038174.1 mouse_genomes_project 8 26002523 26002626 - Gm24202 snRNA snRNA MGP_129S1SvImJ_T0089002.1 MGP_129S1SvImJ_G0033652.1 mouse_genomes_project 8 66577151 66579172 + MGP_129S1SvImJ_P0089002 Tktl2 protein_coding protein_coding MGP_129S1SvImJ_T0089003.1 MGP_129S1SvImJ_G0033652.1 mouse_genomes_project 8 66577154 66583737 + MGP_129S1SvImJ_P0089003 Tktl2 protein_coding protein_coding MGP_129S1SvImJ_T0016014.1 MGP_129S1SvImJ_G0014103.1 mouse_genomes_project 8 107017088 107018113 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018510.1 MGP_129S1SvImJ_G0015718.1 mouse_genomes_project 8 78199020 78280289 + processed_transcript processed_transcript MGP_129S1SvImJ_T0018511.1 MGP_129S1SvImJ_G0015718.1 mouse_genomes_project 8 78246492 78370553 + processed_transcript processed_transcript MGP_129S1SvImJ_T0018512.1 MGP_129S1SvImJ_G0015718.1 mouse_genomes_project 8 78365941 78369781 + processed_transcript processed_transcript MGP_129S1SvImJ_T0015994.1 MGP_129S1SvImJ_G0014083.1 mouse_genomes_project 8 77413901 77414694 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0090393.1 MGP_129S1SvImJ_G0034101.1 mouse_genomes_project 8 109869918 109882494 - MGP_129S1SvImJ_P0090393 Nob1 protein_coding protein_coding MGP_129S1SvImJ_T0090394.1 MGP_129S1SvImJ_G0034101.1 mouse_genomes_project 8 109869924 109879001 - Nob1 protein_coding retained_intron MGP_129S1SvImJ_T0090395.1 MGP_129S1SvImJ_G0034101.1 mouse_genomes_project 8 109869924 109882480 - MGP_129S1SvImJ_P0090395 Nob1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090396.1 MGP_129S1SvImJ_G0034101.1 mouse_genomes_project 8 109873676 109882425 - Nob1 protein_coding retained_intron MGP_129S1SvImJ_T0090397.1 MGP_129S1SvImJ_G0034101.1 mouse_genomes_project 8 109875133 109882490 - Nob1 protein_coding retained_intron MGP_129S1SvImJ_T0090398.1 MGP_129S1SvImJ_G0034101.1 mouse_genomes_project 8 109875494 109879766 - Nob1 protein_coding processed_transcript MGP_129S1SvImJ_T0090399.1 MGP_129S1SvImJ_G0034101.1 mouse_genomes_project 8 109875592 109876105 - Nob1 protein_coding retained_intron MGP_129S1SvImJ_T0090400.1 MGP_129S1SvImJ_G0034101.1 mouse_genomes_project 8 109875788 109882465 - MGP_129S1SvImJ_P0090400 Nob1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090830.1 MGP_129S1SvImJ_G0034233.1 mouse_genomes_project 8 126147084 126147409 + MGP_129S1SvImJ_P0090830 protein_coding protein_coding MGP_129S1SvImJ_T0090116.1 MGP_129S1SvImJ_G0033994.1 mouse_genomes_project 8 97351427 97369846 - MGP_129S1SvImJ_P0090116 Slc38a7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0090117.1 MGP_129S1SvImJ_G0033994.1 mouse_genomes_project 8 97356243 97358022 - Slc38a7 protein_coding retained_intron MGP_129S1SvImJ_T0090118.1 MGP_129S1SvImJ_G0033994.1 mouse_genomes_project 8 97358220 97360196 - Slc38a7 protein_coding retained_intron MGP_129S1SvImJ_T0002350.1 MGP_129S1SvImJ_G0002261.1 mouse_genomes_project 8 10624983 10627098 - TEC TEC MGP_129S1SvImJ_T0090119.1 MGP_129S1SvImJ_G0033995.1 mouse_genomes_project 8 97383454 97409312 - MGP_129S1SvImJ_P0090119 Got2 protein_coding protein_coding MGP_129S1SvImJ_T0090120.1 MGP_129S1SvImJ_G0033995.1 mouse_genomes_project 8 97386147 97391684 - Got2 protein_coding processed_transcript MGP_129S1SvImJ_T0090285.1 MGP_129S1SvImJ_G0034064.1 mouse_genomes_project 8 108201111 108213456 + MGP_129S1SvImJ_P0090285 Edc4 protein_coding protein_coding MGP_129S1SvImJ_T0090286.1 MGP_129S1SvImJ_G0034064.1 mouse_genomes_project 8 108201181 108213439 + MGP_129S1SvImJ_P0090286 Edc4 protein_coding protein_coding MGP_129S1SvImJ_T0090287.1 MGP_129S1SvImJ_G0034064.1 mouse_genomes_project 8 108201307 108215139 + MGP_129S1SvImJ_P0090287 Edc4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090288.1 MGP_129S1SvImJ_G0034064.1 mouse_genomes_project 8 108207199 108208376 + Edc4 protein_coding retained_intron MGP_129S1SvImJ_T0090289.1 MGP_129S1SvImJ_G0034064.1 mouse_genomes_project 8 108207608 108209763 + MGP_129S1SvImJ_P0090289 Edc4 protein_coding protein_coding MGP_129S1SvImJ_T0090290.1 MGP_129S1SvImJ_G0034064.1 mouse_genomes_project 8 108207622 108208944 + MGP_129S1SvImJ_P0090290 Edc4 protein_coding protein_coding MGP_129S1SvImJ_T0090291.1 MGP_129S1SvImJ_G0034064.1 mouse_genomes_project 8 108210498 108211559 + Edc4 protein_coding retained_intron MGP_129S1SvImJ_T0090990.1 MGP_129S1SvImJ_G0034285.1 mouse_genomes_project 8 128787505 129016667 + MGP_129S1SvImJ_P0090990 protein_coding protein_coding MGP_129S1SvImJ_T0090991.1 MGP_129S1SvImJ_G0034285.1 mouse_genomes_project 8 128787505 129016667 + MGP_129S1SvImJ_P0090991 protein_coding protein_coding MGP_129S1SvImJ_T0090992.1 MGP_129S1SvImJ_G0034285.1 mouse_genomes_project 8 128787505 129016667 + MGP_129S1SvImJ_P0090992 protein_coding protein_coding MGP_129S1SvImJ_T0090993.1 MGP_129S1SvImJ_G0034285.1 mouse_genomes_project 8 128787505 129017374 + MGP_129S1SvImJ_P0090993 protein_coding protein_coding MGP_129S1SvImJ_T0090994.1 MGP_129S1SvImJ_G0034285.1 mouse_genomes_project 8 128787505 129016667 + MGP_129S1SvImJ_P0090994 protein_coding protein_coding MGP_129S1SvImJ_T0090995.1 MGP_129S1SvImJ_G0034285.1 mouse_genomes_project 8 128787505 129017374 + MGP_129S1SvImJ_P0090995 protein_coding protein_coding MGP_129S1SvImJ_T0090996.1 MGP_129S1SvImJ_G0034285.1 mouse_genomes_project 8 128787519 128830752 + MGP_129S1SvImJ_P0090996 protein_coding protein_coding MGP_129S1SvImJ_T0090997.1 MGP_129S1SvImJ_G0034285.1 mouse_genomes_project 8 128787540 129016664 + MGP_129S1SvImJ_P0090997 protein_coding protein_coding MGP_129S1SvImJ_T0090998.1 MGP_129S1SvImJ_G0034285.1 mouse_genomes_project 8 128825482 128843033 + protein_coding processed_transcript MGP_129S1SvImJ_T0011020.1 MGP_129S1SvImJ_G0009136.1 mouse_genomes_project 8 94232155 94232213 - Gm22151 miRNA miRNA MGP_129S1SvImJ_T0090718.1 MGP_129S1SvImJ_G0034208.1 mouse_genomes_project 8 124569006 124585697 - MGP_129S1SvImJ_P0090718 Mthfsd protein_coding protein_coding MGP_129S1SvImJ_T0090719.1 MGP_129S1SvImJ_G0034208.1 mouse_genomes_project 8 124572390 124578564 - Mthfsd protein_coding processed_transcript MGP_129S1SvImJ_T0090720.1 MGP_129S1SvImJ_G0034208.1 mouse_genomes_project 8 124574931 124585706 - MGP_129S1SvImJ_P0090720 Mthfsd protein_coding protein_coding MGP_129S1SvImJ_T0090721.1 MGP_129S1SvImJ_G0034208.1 mouse_genomes_project 8 124574933 124585674 - Mthfsd protein_coding processed_transcript MGP_129S1SvImJ_T0090722.1 MGP_129S1SvImJ_G0034208.1 mouse_genomes_project 8 124574935 124585689 - MGP_129S1SvImJ_P0090722 Mthfsd protein_coding protein_coding MGP_129S1SvImJ_T0090723.1 MGP_129S1SvImJ_G0034208.1 mouse_genomes_project 8 124575145 124578972 - Mthfsd protein_coding retained_intron MGP_129S1SvImJ_T0090724.1 MGP_129S1SvImJ_G0034208.1 mouse_genomes_project 8 124575229 124585771 - MGP_129S1SvImJ_P0090724 Mthfsd protein_coding protein_coding MGP_129S1SvImJ_T0090725.1 MGP_129S1SvImJ_G0034208.1 mouse_genomes_project 8 124575315 124585758 - Mthfsd protein_coding retained_intron MGP_129S1SvImJ_T0090726.1 MGP_129S1SvImJ_G0034208.1 mouse_genomes_project 8 124576086 124585667 - Mthfsd protein_coding processed_transcript MGP_129S1SvImJ_T0090727.1 MGP_129S1SvImJ_G0034208.1 mouse_genomes_project 8 124576386 124583011 - Mthfsd protein_coding processed_transcript MGP_129S1SvImJ_T0090728.1 MGP_129S1SvImJ_G0034208.1 mouse_genomes_project 8 124578554 124585677 - MGP_129S1SvImJ_P0090728 Mthfsd protein_coding protein_coding MGP_129S1SvImJ_T0090729.1 MGP_129S1SvImJ_G0034208.1 mouse_genomes_project 8 124580101 124585022 - Mthfsd protein_coding retained_intron MGP_129S1SvImJ_T0090730.1 MGP_129S1SvImJ_G0034208.1 mouse_genomes_project 8 124581230 124583068 - Mthfsd protein_coding processed_transcript MGP_129S1SvImJ_T0090731.1 MGP_129S1SvImJ_G0034208.1 mouse_genomes_project 8 124581477 124585692 - Mthfsd protein_coding processed_transcript MGP_129S1SvImJ_T0090732.1 MGP_129S1SvImJ_G0034208.1 mouse_genomes_project 8 124581853 124585722 - Mthfsd protein_coding processed_transcript MGP_129S1SvImJ_T0015958.1 MGP_129S1SvImJ_G0014047.1 mouse_genomes_project 8 16119323 16119698 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100105.1 MGP_129S1SvImJ_G0038172.1 mouse_genomes_project 8 22936620 22936723 + Gm23898 snRNA snRNA MGP_129S1SvImJ_T0088078.1 MGP_129S1SvImJ_G0033343.1 mouse_genomes_project 8 5739520 5763463 - MGP_129S1SvImJ_P0088078 Arglu1 protein_coding protein_coding MGP_129S1SvImJ_T0010979.1 MGP_129S1SvImJ_G0009095.1 mouse_genomes_project 8 23170243 23170352 - Mir8108 miRNA miRNA MGP_129S1SvImJ_T0089820.1 MGP_129S1SvImJ_G0033898.1 mouse_genomes_project 8 86183112 86222130 - MGP_129S1SvImJ_P0089820 Vps35 protein_coding protein_coding MGP_129S1SvImJ_T0090259.1 MGP_129S1SvImJ_G0034050.1 mouse_genomes_project 8 107858836 107936495 - MGP_129S1SvImJ_P0090259 Agrp protein_coding protein_coding MGP_129S1SvImJ_T0090260.1 MGP_129S1SvImJ_G0034050.1 mouse_genomes_project 8 107858836 107860437 - MGP_129S1SvImJ_P0090260 Agrp protein_coding protein_coding MGP_129S1SvImJ_T0090261.1 MGP_129S1SvImJ_G0034050.1 mouse_genomes_project 8 107858936 107874224 - MGP_129S1SvImJ_P0090261 Agrp protein_coding protein_coding MGP_129S1SvImJ_T0089862.1 MGP_129S1SvImJ_G0033909.1 mouse_genomes_project 8 87703137 87725197 - MGP_129S1SvImJ_P0089862 Siah1a protein_coding protein_coding MGP_129S1SvImJ_T0090007.1 MGP_129S1SvImJ_G0033957.1 mouse_genomes_project 8 95580878 95582115 + MGP_129S1SvImJ_P0090007 Mt1 protein_coding protein_coding MGP_129S1SvImJ_T0088355.1 MGP_129S1SvImJ_G0033456.1 mouse_genomes_project 8 20484142 20513623 - MGP_129S1SvImJ_P0088355 Polb protein_coding protein_coding MGP_129S1SvImJ_T0088201.1 MGP_129S1SvImJ_G0033381.1 mouse_genomes_project 8 10790303 10816282 + MGP_129S1SvImJ_P0088201 Tmem255b protein_coding protein_coding MGP_129S1SvImJ_T0088202.1 MGP_129S1SvImJ_G0033381.1 mouse_genomes_project 8 10790303 10816282 + MGP_129S1SvImJ_P0088202 Tmem255b protein_coding protein_coding MGP_129S1SvImJ_T0089178.1 MGP_129S1SvImJ_G0033700.1 mouse_genomes_project 8 70566041 70576496 + MGP_129S1SvImJ_P0089178 Cope protein_coding protein_coding MGP_129S1SvImJ_T0089179.1 MGP_129S1SvImJ_G0033700.1 mouse_genomes_project 8 70566264 70569945 + Cope protein_coding retained_intron MGP_129S1SvImJ_T0089180.1 MGP_129S1SvImJ_G0033700.1 mouse_genomes_project 8 70566292 70576499 + Cope protein_coding retained_intron MGP_129S1SvImJ_T0089181.1 MGP_129S1SvImJ_G0033700.1 mouse_genomes_project 8 70566296 70573998 + MGP_129S1SvImJ_P0089181 Cope protein_coding protein_coding MGP_129S1SvImJ_T0089182.1 MGP_129S1SvImJ_G0033700.1 mouse_genomes_project 8 70566316 70570450 + Cope protein_coding retained_intron MGP_129S1SvImJ_T0089183.1 MGP_129S1SvImJ_G0033700.1 mouse_genomes_project 8 70566319 70576278 + MGP_129S1SvImJ_P0089183 Cope protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089184.1 MGP_129S1SvImJ_G0033700.1 mouse_genomes_project 8 70569221 70576496 + MGP_129S1SvImJ_P0089184 Cope protein_coding protein_coding MGP_129S1SvImJ_T0089185.1 MGP_129S1SvImJ_G0033700.1 mouse_genomes_project 8 70572032 70576496 + MGP_129S1SvImJ_P0089185 Cope protein_coding protein_coding MGP_129S1SvImJ_T0015970.1 MGP_129S1SvImJ_G0014059.1 mouse_genomes_project 8 26443651 26444639 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0089830.1 MGP_129S1SvImJ_G0033902.1 mouse_genomes_project 8 86428984 86463777 + MGP_129S1SvImJ_P0089830 Gpt2 protein_coding protein_coding MGP_129S1SvImJ_T0089831.1 MGP_129S1SvImJ_G0033902.1 mouse_genomes_project 8 86429015 86461064 + MGP_129S1SvImJ_P0089831 Gpt2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089832.1 MGP_129S1SvImJ_G0033902.1 mouse_genomes_project 8 86429017 86429716 + Gpt2 protein_coding processed_transcript MGP_129S1SvImJ_T0089833.1 MGP_129S1SvImJ_G0033902.1 mouse_genomes_project 8 86452181 86457728 + Gpt2 protein_coding retained_intron MGP_129S1SvImJ_T0089834.1 MGP_129S1SvImJ_G0033902.1 mouse_genomes_project 8 86455650 86461910 + Gpt2 protein_coding processed_transcript MGP_129S1SvImJ_T0090561.1 MGP_129S1SvImJ_G0034158.1 mouse_genomes_project 8 117095163 117117401 + MGP_129S1SvImJ_P0090561 Nudt7 protein_coding protein_coding MGP_129S1SvImJ_T0090562.1 MGP_129S1SvImJ_G0034158.1 mouse_genomes_project 8 117095180 117114966 + MGP_129S1SvImJ_P0090562 Nudt7 protein_coding protein_coding MGP_129S1SvImJ_T0090563.1 MGP_129S1SvImJ_G0034158.1 mouse_genomes_project 8 117095224 117114976 + MGP_129S1SvImJ_P0090563 Nudt7 protein_coding protein_coding MGP_129S1SvImJ_T0090564.1 MGP_129S1SvImJ_G0034158.1 mouse_genomes_project 8 117095247 117114970 + MGP_129S1SvImJ_P0090564 Nudt7 protein_coding protein_coding MGP_129S1SvImJ_T0090565.1 MGP_129S1SvImJ_G0034158.1 mouse_genomes_project 8 117095248 117111072 + MGP_129S1SvImJ_P0090565 Nudt7 protein_coding protein_coding MGP_129S1SvImJ_T0089583.1 MGP_129S1SvImJ_G0033834.1 mouse_genomes_project 8 84393845 84419076 - MGP_129S1SvImJ_P0089583 Tecr protein_coding protein_coding MGP_129S1SvImJ_T0089584.1 MGP_129S1SvImJ_G0033834.1 mouse_genomes_project 8 84393845 84419076 - MGP_129S1SvImJ_P0089584 Tecr protein_coding protein_coding MGP_129S1SvImJ_T0089585.1 MGP_129S1SvImJ_G0033834.1 mouse_genomes_project 8 84393845 84419014 - MGP_129S1SvImJ_P0089585 Tecr protein_coding protein_coding MGP_129S1SvImJ_T0088090.1 MGP_129S1SvImJ_G0033352.1 mouse_genomes_project 8 8518706 8657119 + MGP_129S1SvImJ_P0088090 Col4a2 protein_coding protein_coding MGP_129S1SvImJ_T0088091.1 MGP_129S1SvImJ_G0033352.1 mouse_genomes_project 8 8611752 8628103 + MGP_129S1SvImJ_P0088091 Col4a2 protein_coding protein_coding MGP_129S1SvImJ_T0088092.1 MGP_129S1SvImJ_G0033352.1 mouse_genomes_project 8 8648940 8651534 + Col4a2 protein_coding processed_transcript MGP_129S1SvImJ_T0090985.1 MGP_129S1SvImJ_G0034281.1 mouse_genomes_project 8 128604825 128612219 - MGP_129S1SvImJ_P0090985 Exoc8 protein_coding protein_coding MGP_129S1SvImJ_T0011016.1 MGP_129S1SvImJ_G0009132.1 mouse_genomes_project 8 86654696 86654813 + Mir8109 miRNA miRNA MGP_129S1SvImJ_T0088319.1 MGP_129S1SvImJ_G0033434.1 mouse_genomes_project 8 19635863 19643047 + MGP_129S1SvImJ_P0088319 Defb10 protein_coding protein_coding MGP_129S1SvImJ_T0090004.1 MGP_129S1SvImJ_G0033954.1 mouse_genomes_project 8 95533111 95534939 + MGP_129S1SvImJ_P0090004 Mt4 protein_coding protein_coding MGP_129S1SvImJ_T0005381.1 MGP_129S1SvImJ_G0004561.1 mouse_genomes_project 8 61784820 61871130 + 4930512H18Rik antisense antisense MGP_129S1SvImJ_T0101420.1 MGP_129S1SvImJ_G0039487.1 mouse_genomes_project 8 121993941 121994029 + Gm22999 snoRNA snoRNA MGP_129S1SvImJ_T0089680.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85597829 85603256 + Trmt1 protein_coding retained_intron MGP_129S1SvImJ_T0089681.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85597841 85598635 + Trmt1 protein_coding processed_transcript MGP_129S1SvImJ_T0089682.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85597861 85603642 + MGP_129S1SvImJ_P0089682 Trmt1 protein_coding protein_coding MGP_129S1SvImJ_T0089683.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85601180 85612585 + MGP_129S1SvImJ_P0089683 Trmt1 protein_coding protein_coding MGP_129S1SvImJ_T0089684.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85601561 85612564 + MGP_129S1SvImJ_P0089684 Trmt1 protein_coding protein_coding MGP_129S1SvImJ_T0089685.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85601571 85603059 + Trmt1 protein_coding processed_transcript MGP_129S1SvImJ_T0089686.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85601571 85603690 + Trmt1 protein_coding retained_intron MGP_129S1SvImJ_T0089687.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85601571 85608304 + MGP_129S1SvImJ_P0089687 Trmt1 protein_coding protein_coding MGP_129S1SvImJ_T0089688.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85601578 85612563 + MGP_129S1SvImJ_P0089688 Trmt1 protein_coding protein_coding MGP_129S1SvImJ_T0089689.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85601583 85609694 + MGP_129S1SvImJ_P0089689 Trmt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089690.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85601586 85608075 + MGP_129S1SvImJ_P0089690 Trmt1 protein_coding protein_coding MGP_129S1SvImJ_T0089691.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85601597 85612585 + Trmt1 protein_coding retained_intron MGP_129S1SvImJ_T0089692.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85601597 85603548 + Trmt1 protein_coding retained_intron MGP_129S1SvImJ_T0089693.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85601598 85603131 + Trmt1 protein_coding retained_intron MGP_129S1SvImJ_T0089694.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85601599 85602293 + Trmt1 protein_coding retained_intron MGP_129S1SvImJ_T0089695.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85601600 85603128 + Trmt1 protein_coding processed_transcript MGP_129S1SvImJ_T0089696.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85601600 85608247 + MGP_129S1SvImJ_P0089696 Trmt1 protein_coding protein_coding MGP_129S1SvImJ_T0089697.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85601600 85608223 + MGP_129S1SvImJ_P0089697 Trmt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089698.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85601603 85604345 + Trmt1 protein_coding processed_transcript MGP_129S1SvImJ_T0089699.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85601782 85612562 + MGP_129S1SvImJ_P0089699 Trmt1 protein_coding protein_coding MGP_129S1SvImJ_T0089700.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85601795 85608013 + MGP_129S1SvImJ_P0089700 Trmt1 protein_coding protein_coding MGP_129S1SvImJ_T0089701.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85601950 85608304 + Trmt1 protein_coding processed_transcript MGP_129S1SvImJ_T0089702.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85602708 85609901 + Trmt1 protein_coding processed_transcript MGP_129S1SvImJ_T0089703.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85607695 85610205 + Trmt1 protein_coding retained_intron MGP_129S1SvImJ_T0089704.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85609612 85610290 + Trmt1 protein_coding retained_intron MGP_129S1SvImJ_T0089705.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85609743 85611029 + MGP_129S1SvImJ_P0089705 Trmt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089706.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85610090 85610723 + Trmt1 protein_coding retained_intron MGP_129S1SvImJ_T0089707.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85611165 85612563 + MGP_129S1SvImJ_P0089707 Trmt1 protein_coding protein_coding MGP_129S1SvImJ_T0089708.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85611847 85612563 + Trmt1 protein_coding retained_intron MGP_129S1SvImJ_T0089709.1 MGP_129S1SvImJ_G0033866.1 mouse_genomes_project 8 85611957 85612428 + Trmt1 protein_coding retained_intron MGP_129S1SvImJ_T0101389.1 MGP_129S1SvImJ_G0039456.1 mouse_genomes_project 8 62745844 62745958 + Gm22324 snoRNA snoRNA MGP_129S1SvImJ_T0089911.1 MGP_129S1SvImJ_G0033925.1 mouse_genomes_project 8 90265331 90265838 - MGP_129S1SvImJ_P0089911 protein_coding protein_coding MGP_129S1SvImJ_T0088835.1 MGP_129S1SvImJ_G0033603.1 mouse_genomes_project 8 47029388 47031742 + MGP_129S1SvImJ_P0088835 protein_coding protein_coding MGP_129S1SvImJ_T0090516.1 MGP_129S1SvImJ_G0034141.1 mouse_genomes_project 8 114318434 114426253 + MGP_129S1SvImJ_P0090516 Znrf1 protein_coding protein_coding MGP_129S1SvImJ_T0090517.1 MGP_129S1SvImJ_G0034141.1 mouse_genomes_project 8 114319413 114426563 + MGP_129S1SvImJ_P0090517 Znrf1 protein_coding protein_coding MGP_129S1SvImJ_T0090518.1 MGP_129S1SvImJ_G0034141.1 mouse_genomes_project 8 114319413 114426563 + MGP_129S1SvImJ_P0090518 Znrf1 protein_coding protein_coding MGP_129S1SvImJ_T0090519.1 MGP_129S1SvImJ_G0034141.1 mouse_genomes_project 8 114330336 114424311 + MGP_129S1SvImJ_P0090519 Znrf1 protein_coding protein_coding MGP_129S1SvImJ_T0090520.1 MGP_129S1SvImJ_G0034141.1 mouse_genomes_project 8 114330614 114423506 + MGP_129S1SvImJ_P0090520 Znrf1 protein_coding protein_coding MGP_129S1SvImJ_T0090521.1 MGP_129S1SvImJ_G0034141.1 mouse_genomes_project 8 114330764 114426143 + MGP_129S1SvImJ_P0090521 Znrf1 protein_coding protein_coding MGP_129S1SvImJ_T0090522.1 MGP_129S1SvImJ_G0034141.1 mouse_genomes_project 8 114330957 114422469 + MGP_129S1SvImJ_P0090522 Znrf1 protein_coding protein_coding MGP_129S1SvImJ_T0090523.1 MGP_129S1SvImJ_G0034141.1 mouse_genomes_project 8 114330981 114423034 + MGP_129S1SvImJ_P0090523 Znrf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090524.1 MGP_129S1SvImJ_G0034141.1 mouse_genomes_project 8 114331837 114423104 + MGP_129S1SvImJ_P0090524 Znrf1 protein_coding protein_coding MGP_129S1SvImJ_T0090525.1 MGP_129S1SvImJ_G0034141.1 mouse_genomes_project 8 114331837 114426563 + MGP_129S1SvImJ_P0090525 Znrf1 protein_coding protein_coding MGP_129S1SvImJ_T0090526.1 MGP_129S1SvImJ_G0034141.1 mouse_genomes_project 8 114331959 114409919 + Znrf1 protein_coding processed_transcript MGP_129S1SvImJ_T0090527.1 MGP_129S1SvImJ_G0034141.1 mouse_genomes_project 8 114334752 114422197 + MGP_129S1SvImJ_P0090527 Znrf1 protein_coding protein_coding MGP_129S1SvImJ_T0090528.1 MGP_129S1SvImJ_G0034141.1 mouse_genomes_project 8 114359629 114407351 + Znrf1 protein_coding processed_transcript MGP_129S1SvImJ_T0090529.1 MGP_129S1SvImJ_G0034141.1 mouse_genomes_project 8 114407302 114423495 + MGP_129S1SvImJ_P0090529 Znrf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090530.1 MGP_129S1SvImJ_G0034141.1 mouse_genomes_project 8 114409850 114422308 + MGP_129S1SvImJ_P0090530 Znrf1 protein_coding protein_coding MGP_129S1SvImJ_T0011732.1 MGP_129S1SvImJ_G0009848.1 mouse_genomes_project 8 8942232 8942476 - Gm27854 misc_RNA misc_RNA MGP_129S1SvImJ_T0009184.1 MGP_129S1SvImJ_G0007380.1 mouse_genomes_project 8 111637892 111829387 + D030068K23Rik lincRNA lincRNA MGP_129S1SvImJ_T0009185.1 MGP_129S1SvImJ_G0007380.1 mouse_genomes_project 8 111637893 111803757 + D030068K23Rik lincRNA lincRNA MGP_129S1SvImJ_T0009186.1 MGP_129S1SvImJ_G0007380.1 mouse_genomes_project 8 111824937 111851329 + D030068K23Rik lincRNA lincRNA MGP_129S1SvImJ_T0089384.1 MGP_129S1SvImJ_G0033763.1 mouse_genomes_project 8 72124566 72137373 - MGP_129S1SvImJ_P0089384 Fcho1 protein_coding protein_coding MGP_129S1SvImJ_T0089385.1 MGP_129S1SvImJ_G0033763.1 mouse_genomes_project 8 72124573 72141780 - MGP_129S1SvImJ_P0089385 Fcho1 protein_coding protein_coding MGP_129S1SvImJ_T0089386.1 MGP_129S1SvImJ_G0033763.1 mouse_genomes_project 8 72124599 72141730 - Fcho1 protein_coding retained_intron MGP_129S1SvImJ_T0089387.1 MGP_129S1SvImJ_G0033763.1 mouse_genomes_project 8 72124832 72141730 - MGP_129S1SvImJ_P0089387 Fcho1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089388.1 MGP_129S1SvImJ_G0033763.1 mouse_genomes_project 8 72125816 72127286 - Fcho1 protein_coding retained_intron MGP_129S1SvImJ_T0089389.1 MGP_129S1SvImJ_G0033763.1 mouse_genomes_project 8 72125868 72128359 - Fcho1 protein_coding retained_intron MGP_129S1SvImJ_T0089390.1 MGP_129S1SvImJ_G0033763.1 mouse_genomes_project 8 72128719 72131721 - MGP_129S1SvImJ_P0089390 Fcho1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089391.1 MGP_129S1SvImJ_G0033763.1 mouse_genomes_project 8 72130527 72132773 - Fcho1 protein_coding retained_intron MGP_129S1SvImJ_T0089392.1 MGP_129S1SvImJ_G0033763.1 mouse_genomes_project 8 72131934 72141768 - MGP_129S1SvImJ_P0089392 Fcho1 protein_coding protein_coding MGP_129S1SvImJ_T0089393.1 MGP_129S1SvImJ_G0033763.1 mouse_genomes_project 8 72132029 72137931 - Fcho1 protein_coding processed_transcript MGP_129S1SvImJ_T0089394.1 MGP_129S1SvImJ_G0033763.1 mouse_genomes_project 8 72132954 72141711 - Fcho1 protein_coding retained_intron MGP_129S1SvImJ_T0089395.1 MGP_129S1SvImJ_G0033763.1 mouse_genomes_project 8 72133352 72139413 - MGP_129S1SvImJ_P0089395 Fcho1 protein_coding protein_coding MGP_129S1SvImJ_T0090031.1 MGP_129S1SvImJ_G0033965.1 mouse_genomes_project 8 96097184 96106634 + MGP_129S1SvImJ_P0090031 Arl2bp protein_coding protein_coding MGP_129S1SvImJ_T0090032.1 MGP_129S1SvImJ_G0033965.1 mouse_genomes_project 8 96097655 96106634 + MGP_129S1SvImJ_P0090032 Arl2bp protein_coding protein_coding MGP_129S1SvImJ_T0090652.1 MGP_129S1SvImJ_G0034195.1 mouse_genomes_project 8 123275043 123324031 + MGP_129S1SvImJ_P0090652 Usp10 protein_coding protein_coding MGP_129S1SvImJ_T0090653.1 MGP_129S1SvImJ_G0034195.1 mouse_genomes_project 8 123275497 123324036 + MGP_129S1SvImJ_P0090653 Usp10 protein_coding protein_coding MGP_129S1SvImJ_T0090654.1 MGP_129S1SvImJ_G0034195.1 mouse_genomes_project 8 123275516 123319103 + Usp10 protein_coding processed_transcript MGP_129S1SvImJ_T0090655.1 MGP_129S1SvImJ_G0034195.1 mouse_genomes_project 8 123275540 123318410 + MGP_129S1SvImJ_P0090655 Usp10 protein_coding protein_coding MGP_129S1SvImJ_T0090656.1 MGP_129S1SvImJ_G0034195.1 mouse_genomes_project 8 123310361 123315002 + Usp10 protein_coding processed_transcript MGP_129S1SvImJ_T0090657.1 MGP_129S1SvImJ_G0034195.1 mouse_genomes_project 8 123314586 123319767 + Usp10 protein_coding retained_intron MGP_129S1SvImJ_T0090658.1 MGP_129S1SvImJ_G0034195.1 mouse_genomes_project 8 123314697 123318879 + Usp10 protein_coding retained_intron MGP_129S1SvImJ_T0090659.1 MGP_129S1SvImJ_G0034195.1 mouse_genomes_project 8 123318438 123321793 + Usp10 protein_coding retained_intron MGP_129S1SvImJ_T0090660.1 MGP_129S1SvImJ_G0034195.1 mouse_genomes_project 8 123319127 123321287 + Usp10 protein_coding retained_intron MGP_129S1SvImJ_T0090661.1 MGP_129S1SvImJ_G0034195.1 mouse_genomes_project 8 123319750 123323345 + MGP_129S1SvImJ_P0090661 Usp10 protein_coding protein_coding MGP_129S1SvImJ_T0090662.1 MGP_129S1SvImJ_G0034195.1 mouse_genomes_project 8 123322681 123324033 + Usp10 protein_coding processed_transcript MGP_129S1SvImJ_T0009189.1 MGP_129S1SvImJ_G0007383.1 mouse_genomes_project 8 123483280 123485603 + A130014A01Rik lincRNA lincRNA MGP_129S1SvImJ_T0100124.1 MGP_129S1SvImJ_G0038191.1 mouse_genomes_project 8 77767795 77767967 + Gm23260 snRNA snRNA MGP_129S1SvImJ_T0090864.1 MGP_129S1SvImJ_G0034243.1 mouse_genomes_project 8 126736587 126751881 - MGP_129S1SvImJ_P0090864 Sult5a1 protein_coding protein_coding MGP_129S1SvImJ_T0090865.1 MGP_129S1SvImJ_G0034243.1 mouse_genomes_project 8 126736589 126751881 - MGP_129S1SvImJ_P0090865 Sult5a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090866.1 MGP_129S1SvImJ_G0034243.1 mouse_genomes_project 8 126739146 126751868 - MGP_129S1SvImJ_P0090866 Sult5a1 protein_coding protein_coding MGP_129S1SvImJ_T0090867.1 MGP_129S1SvImJ_G0034243.1 mouse_genomes_project 8 126741820 126751839 - MGP_129S1SvImJ_P0090867 Sult5a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090868.1 MGP_129S1SvImJ_G0034243.1 mouse_genomes_project 8 126750612 126751885 - Sult5a1 protein_coding retained_intron MGP_129S1SvImJ_T0090869.1 MGP_129S1SvImJ_G0034243.1 mouse_genomes_project 8 126750881 126751926 - Sult5a1 protein_coding retained_intron MGP_129S1SvImJ_T0090355.1 MGP_129S1SvImJ_G0034090.1 mouse_genomes_project 8 109322312 109329656 - MGP_129S1SvImJ_P0090355 protein_coding protein_coding MGP_129S1SvImJ_T0089310.1 MGP_129S1SvImJ_G0033741.1 mouse_genomes_project 8 71763804 71771583 - Nr2f6 protein_coding processed_transcript MGP_129S1SvImJ_T0089311.1 MGP_129S1SvImJ_G0033741.1 mouse_genomes_project 8 71763808 71771637 - MGP_129S1SvImJ_P0089311 Nr2f6 protein_coding protein_coding MGP_129S1SvImJ_T0089312.1 MGP_129S1SvImJ_G0033741.1 mouse_genomes_project 8 71764315 71765478 - Nr2f6 protein_coding processed_transcript MGP_129S1SvImJ_T0089313.1 MGP_129S1SvImJ_G0033741.1 mouse_genomes_project 8 71764340 71765478 - Nr2f6 protein_coding processed_transcript MGP_129S1SvImJ_T0089314.1 MGP_129S1SvImJ_G0033741.1 mouse_genomes_project 8 71764805 71765478 - Nr2f6 protein_coding processed_transcript MGP_129S1SvImJ_T0089315.1 MGP_129S1SvImJ_G0033741.1 mouse_genomes_project 8 71765439 71770586 - Nr2f6 protein_coding processed_transcript MGP_129S1SvImJ_T0089316.1 MGP_129S1SvImJ_G0033741.1 mouse_genomes_project 8 71765439 71770767 - MGP_129S1SvImJ_P0089316 Nr2f6 protein_coding protein_coding MGP_129S1SvImJ_T0089317.1 MGP_129S1SvImJ_G0033741.1 mouse_genomes_project 8 71765506 71770854 - MGP_129S1SvImJ_P0089317 Nr2f6 protein_coding protein_coding MGP_129S1SvImJ_T0009142.1 MGP_129S1SvImJ_G0007355.1 mouse_genomes_project 8 88359674 88378199 - Gm27207 lincRNA lincRNA MGP_129S1SvImJ_T0090252.1 MGP_129S1SvImJ_G0034046.1 mouse_genomes_project 8 107753332 107757366 - MGP_129S1SvImJ_P0090252 Tppp3 protein_coding protein_coding MGP_129S1SvImJ_T0090253.1 MGP_129S1SvImJ_G0034046.1 mouse_genomes_project 8 107753508 107755250 - MGP_129S1SvImJ_P0090253 Tppp3 protein_coding protein_coding MGP_129S1SvImJ_T0090254.1 MGP_129S1SvImJ_G0034046.1 mouse_genomes_project 8 107753522 107754502 - MGP_129S1SvImJ_P0090254 Tppp3 protein_coding protein_coding MGP_129S1SvImJ_T0089908.1 MGP_129S1SvImJ_G0033923.1 mouse_genomes_project 8 89790375 89847629 + MGP_129S1SvImJ_P0089908 Cyld protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089909.1 MGP_129S1SvImJ_G0033923.1 mouse_genomes_project 8 89798605 89847625 + MGP_129S1SvImJ_P0089909 Cyld protein_coding protein_coding MGP_129S1SvImJ_T0089114.1 MGP_129S1SvImJ_G0033688.1 mouse_genomes_project 8 70332487 70339793 + MGP_129S1SvImJ_P0089114 Hapln4 protein_coding protein_coding MGP_129S1SvImJ_T0099013.1 MGP_129S1SvImJ_G0037086.1 mouse_genomes_project 8 123945033 123946105 + Gm26971 sense_intronic sense_intronic MGP_129S1SvImJ_T0002351.1 MGP_129S1SvImJ_G0002262.1 mouse_genomes_project 8 12453756 12457901 - TEC TEC MGP_129S1SvImJ_T0009192.1 MGP_129S1SvImJ_G0007386.1 mouse_genomes_project 8 124032857 124033583 + Gm26739 lincRNA lincRNA MGP_129S1SvImJ_T0089581.1 MGP_129S1SvImJ_G0033833.1 mouse_genomes_project 8 84387454 84393772 + MGP_129S1SvImJ_P0089581 Ndufb7 protein_coding protein_coding MGP_129S1SvImJ_T0089582.1 MGP_129S1SvImJ_G0033833.1 mouse_genomes_project 8 84387541 84393772 + Ndufb7 protein_coding retained_intron MGP_129S1SvImJ_T0088987.1 MGP_129S1SvImJ_G0033649.1 mouse_genomes_project 8 65104350 65106798 + MGP_129S1SvImJ_P0088987 Gm10663 protein_coding protein_coding MGP_129S1SvImJ_T0088860.1 MGP_129S1SvImJ_G0033611.1 mouse_genomes_project 8 54174182 54183718 - MGP_129S1SvImJ_P0088860 Spcs3 protein_coding protein_coding MGP_129S1SvImJ_T0011054.1 MGP_129S1SvImJ_G0009170.1 mouse_genomes_project 8 132304270 132304350 + Mir1903 miRNA miRNA MGP_129S1SvImJ_T0015979.1 MGP_129S1SvImJ_G0014068.1 mouse_genomes_project 8 36831764 36834576 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0088198.1 MGP_129S1SvImJ_G0033378.1 mouse_genomes_project 8 10684063 10724314 + MGP_129S1SvImJ_P0088198 Tfdp1 protein_coding protein_coding MGP_129S1SvImJ_T0088666.1 MGP_129S1SvImJ_G0033557.1 mouse_genomes_project 8 39681267 39741473 + MGP_129S1SvImJ_P0088666 Slc7a2 protein_coding protein_coding MGP_129S1SvImJ_T0088667.1 MGP_129S1SvImJ_G0033557.1 mouse_genomes_project 8 39681283 39748356 + MGP_129S1SvImJ_P0088667 Slc7a2 protein_coding protein_coding MGP_129S1SvImJ_T0088668.1 MGP_129S1SvImJ_G0033557.1 mouse_genomes_project 8 39681449 39720348 + MGP_129S1SvImJ_P0088668 Slc7a2 protein_coding protein_coding MGP_129S1SvImJ_T0088669.1 MGP_129S1SvImJ_G0033557.1 mouse_genomes_project 8 39693854 39748118 + MGP_129S1SvImJ_P0088669 Slc7a2 protein_coding protein_coding MGP_129S1SvImJ_T0088670.1 MGP_129S1SvImJ_G0033557.1 mouse_genomes_project 8 39719801 39741143 + MGP_129S1SvImJ_P0088670 Slc7a2 protein_coding protein_coding MGP_129S1SvImJ_T0088320.1 MGP_129S1SvImJ_G0033435.1 mouse_genomes_project 8 19702899 19706793 - MGP_129S1SvImJ_P0088320 Defb9 protein_coding protein_coding MGP_129S1SvImJ_T0090690.1 MGP_129S1SvImJ_G0034201.1 mouse_genomes_project 8 124011011 124021193 - Gins2 protein_coding retained_intron MGP_129S1SvImJ_T0090691.1 MGP_129S1SvImJ_G0034201.1 mouse_genomes_project 8 124011011 124021517 - MGP_129S1SvImJ_P0090691 Gins2 protein_coding protein_coding MGP_129S1SvImJ_T0090692.1 MGP_129S1SvImJ_G0034201.1 mouse_genomes_project 8 124013922 124018586 - Gins2 protein_coding retained_intron MGP_129S1SvImJ_T0090693.1 MGP_129S1SvImJ_G0034201.1 mouse_genomes_project 8 124014533 124021247 - Gins2 protein_coding processed_transcript MGP_129S1SvImJ_T0011741.1 MGP_129S1SvImJ_G0009857.1 mouse_genomes_project 8 80668135 80668310 + Gm27820 misc_RNA misc_RNA MGP_129S1SvImJ_T0005409.1 MGP_129S1SvImJ_G0004584.1 mouse_genomes_project 8 113495920 113497760 + Gm15895 antisense antisense MGP_129S1SvImJ_T0088325.1 MGP_129S1SvImJ_G0033440.1 mouse_genomes_project 8 19794949 19800557 + MGP_129S1SvImJ_P0088325 Fam90a1a protein_coding protein_coding MGP_129S1SvImJ_T0101412.1 MGP_129S1SvImJ_G0039479.1 mouse_genomes_project 8 108317238 108317369 - Gm22972 snoRNA snoRNA MGP_129S1SvImJ_T0089326.1 MGP_129S1SvImJ_G0033746.1 mouse_genomes_project 8 71858869 71859693 + MGP_129S1SvImJ_P0089326 Mrpl34 protein_coding protein_coding MGP_129S1SvImJ_T0098388.1 MGP_129S1SvImJ_G0036473.1 mouse_genomes_project 8 23650109 23651130 + pseudogene pseudogene MGP_129S1SvImJ_T0089274.1 MGP_129S1SvImJ_G0033731.1 mouse_genomes_project 8 71175253 71177553 + MGP_129S1SvImJ_P0089274 protein_coding protein_coding MGP_129S1SvImJ_T0090297.1 MGP_129S1SvImJ_G0034069.1 mouse_genomes_project 8 108264709 108268569 - MGP_129S1SvImJ_P0090297 Lcat protein_coding protein_coding MGP_129S1SvImJ_T0015993.1 MGP_129S1SvImJ_G0014082.1 mouse_genomes_project 8 76824107 76825115 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0088832.1 MGP_129S1SvImJ_G0033600.1 mouse_genomes_project 8 46897241 46901867 - MGP_129S1SvImJ_P0088832 Cdkn2aip protein_coding protein_coding MGP_129S1SvImJ_T0088968.1 MGP_129S1SvImJ_G0033640.1 mouse_genomes_project 8 63909269 63943353 - MGP_129S1SvImJ_P0088968 Sgol2b protein_coding protein_coding MGP_129S1SvImJ_T0011042.1 MGP_129S1SvImJ_G0009158.1 mouse_genomes_project 8 120633879 120633943 + Mir7078 miRNA miRNA MGP_129S1SvImJ_T0005377.1 MGP_129S1SvImJ_G0004558.1 mouse_genomes_project 8 57032207 57036772 - Gm28063 antisense antisense MGP_129S1SvImJ_T0005378.1 MGP_129S1SvImJ_G0004558.1 mouse_genomes_project 8 57032225 57036772 - Gm28063 antisense antisense MGP_129S1SvImJ_T0011738.1 MGP_129S1SvImJ_G0009854.1 mouse_genomes_project 8 45202024 45202297 + Gm23030 misc_RNA misc_RNA MGP_129S1SvImJ_T0089427.1 MGP_129S1SvImJ_G0033774.1 mouse_genomes_project 8 72673468 72684893 + MGP_129S1SvImJ_P0089427 Hsh2d protein_coding protein_coding MGP_129S1SvImJ_T0089428.1 MGP_129S1SvImJ_G0033774.1 mouse_genomes_project 8 72677404 72684930 + MGP_129S1SvImJ_P0089428 Hsh2d protein_coding protein_coding MGP_129S1SvImJ_T0087990.1 MGP_129S1SvImJ_G0033314.1 mouse_genomes_project 8 611430 614097 + MGP_129S1SvImJ_P0087990 Mcemp1 protein_coding protein_coding MGP_129S1SvImJ_T0005357.1 MGP_129S1SvImJ_G0004542.1 mouse_genomes_project 8 12444564 12448364 - 5830468F06Rik antisense antisense MGP_129S1SvImJ_T0088235.1 MGP_129S1SvImJ_G0033395.1 mouse_genomes_project 8 11477147 12268011 + MGP_129S1SvImJ_P0088235 Dlgap2 protein_coding protein_coding MGP_129S1SvImJ_T0088236.1 MGP_129S1SvImJ_G0033395.1 mouse_genomes_project 8 11477157 12268583 + MGP_129S1SvImJ_P0088236 Dlgap2 protein_coding protein_coding MGP_129S1SvImJ_T0088237.1 MGP_129S1SvImJ_G0033395.1 mouse_genomes_project 8 11565028 12267611 + MGP_129S1SvImJ_P0088237 Dlgap2 protein_coding protein_coding MGP_129S1SvImJ_T0088238.1 MGP_129S1SvImJ_G0033395.1 mouse_genomes_project 8 11565028 12268011 + MGP_129S1SvImJ_P0088238 Dlgap2 protein_coding protein_coding MGP_129S1SvImJ_T0088239.1 MGP_129S1SvImJ_G0033395.1 mouse_genomes_project 8 11784920 11915185 + Dlgap2 protein_coding processed_transcript MGP_129S1SvImJ_T0088240.1 MGP_129S1SvImJ_G0033395.1 mouse_genomes_project 8 11785134 11940128 + Dlgap2 protein_coding processed_transcript MGP_129S1SvImJ_T0088241.1 MGP_129S1SvImJ_G0033395.1 mouse_genomes_project 8 11785182 12252666 + Dlgap2 protein_coding retained_intron MGP_129S1SvImJ_T0088242.1 MGP_129S1SvImJ_G0033395.1 mouse_genomes_project 8 12156568 12178108 + Dlgap2 protein_coding processed_transcript MGP_129S1SvImJ_T0088244.1 MGP_129S1SvImJ_G0033395.1 mouse_genomes_project 8 12197742 12268301 + Dlgap2 protein_coding processed_transcript MGP_129S1SvImJ_T0015957.1 MGP_129S1SvImJ_G0014046.1 mouse_genomes_project 8 12531099 12532127 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0090069.1 MGP_129S1SvImJ_G0033977.1 mouse_genomes_project 8 96471599 96501189 + MGP_129S1SvImJ_P0090069 Adgrg3 protein_coding protein_coding MGP_129S1SvImJ_T0089976.1 MGP_129S1SvImJ_G0033948.1 mouse_genomes_project 8 94868816 94904335 - MGP_129S1SvImJ_P0089976 Ces5a protein_coding protein_coding MGP_129S1SvImJ_T0009137.1 MGP_129S1SvImJ_G0007351.1 mouse_genomes_project 8 88089622 88097308 + Gm5118 lincRNA lincRNA MGP_129S1SvImJ_T0089422.1 MGP_129S1SvImJ_G0033772.1 mouse_genomes_project 8 72614477 72624198 + Tpm4 protein_coding processed_transcript MGP_129S1SvImJ_T0089423.1 MGP_129S1SvImJ_G0033772.1 mouse_genomes_project 8 72614761 72633888 + MGP_129S1SvImJ_P0089423 Tpm4 protein_coding protein_coding MGP_129S1SvImJ_T0089186.1 MGP_129S1SvImJ_G0033701.1 mouse_genomes_project 8 70579274 70595264 + MGP_129S1SvImJ_P0089186 protein_coding protein_coding MGP_129S1SvImJ_T0089187.1 MGP_129S1SvImJ_G0033701.1 mouse_genomes_project 8 70579274 70595269 + MGP_129S1SvImJ_P0089187 protein_coding protein_coding MGP_129S1SvImJ_T0089188.1 MGP_129S1SvImJ_G0033701.1 mouse_genomes_project 8 70581850 70586192 + protein_coding retained_intron MGP_129S1SvImJ_T0015983.1 MGP_129S1SvImJ_G0014072.1 mouse_genomes_project 8 51775953 51776926 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0089447.1 MGP_129S1SvImJ_G0033785.1 mouse_genomes_project 8 72996706 73052729 - MGP_129S1SvImJ_P0089447 Med26 protein_coding protein_coding MGP_129S1SvImJ_T0089199.1 MGP_129S1SvImJ_G0033706.1 mouse_genomes_project 8 70752269 70755753 - MGP_129S1SvImJ_P0089199 Tmem59l protein_coding protein_coding MGP_129S1SvImJ_T0009077.1 MGP_129S1SvImJ_G0007301.1 mouse_genomes_project 8 8960846 8970192 + 1700128E19Rik lincRNA lincRNA MGP_129S1SvImJ_T0089947.1 MGP_129S1SvImJ_G0033936.1 mouse_genomes_project 8 94142332 94170213 + MGP_129S1SvImJ_P0089947 Mmp2 protein_coding protein_coding MGP_129S1SvImJ_T0011742.1 MGP_129S1SvImJ_G0009858.1 mouse_genomes_project 8 84598782 84599068 + Gm22024 misc_RNA misc_RNA MGP_129S1SvImJ_T0005384.1 MGP_129S1SvImJ_G0004564.1 mouse_genomes_project 8 68073667 68094909 + Gm15991 antisense antisense MGP_129S1SvImJ_T0088317.1 MGP_129S1SvImJ_G0033432.1 mouse_genomes_project 8 19603427 19609920 + MGP_129S1SvImJ_P0088317 Defb50 protein_coding protein_coding MGP_129S1SvImJ_T0089280.1 MGP_129S1SvImJ_G0033737.1 mouse_genomes_project 8 71604272 71633462 - MGP_129S1SvImJ_P0089280 Haus8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089281.1 MGP_129S1SvImJ_G0033737.1 mouse_genomes_project 8 71607119 71633935 - MGP_129S1SvImJ_P0089281 Haus8 protein_coding protein_coding MGP_129S1SvImJ_T0089282.1 MGP_129S1SvImJ_G0033737.1 mouse_genomes_project 8 71607119 71633378 - MGP_129S1SvImJ_P0089282 Haus8 protein_coding protein_coding MGP_129S1SvImJ_T0089283.1 MGP_129S1SvImJ_G0033737.1 mouse_genomes_project 8 71611427 71633462 - Haus8 protein_coding processed_transcript MGP_129S1SvImJ_T0089284.1 MGP_129S1SvImJ_G0033737.1 mouse_genomes_project 8 71612022 71612638 - Haus8 protein_coding retained_intron MGP_129S1SvImJ_T0089285.1 MGP_129S1SvImJ_G0033737.1 mouse_genomes_project 8 71612049 71633480 - Haus8 protein_coding processed_transcript MGP_129S1SvImJ_T0089286.1 MGP_129S1SvImJ_G0033737.1 mouse_genomes_project 8 71613022 71633444 - Haus8 protein_coding retained_intron MGP_129S1SvImJ_T0089287.1 MGP_129S1SvImJ_G0033737.1 mouse_genomes_project 8 71617793 71633360 - Haus8 protein_coding processed_transcript MGP_129S1SvImJ_T0009182.1 MGP_129S1SvImJ_G0007378.1 mouse_genomes_project 8 108642208 108662071 + Gm10629 lincRNA lincRNA MGP_129S1SvImJ_T0100144.1 MGP_129S1SvImJ_G0038211.1 mouse_genomes_project 8 121676065 121676172 - Gm24035 snRNA snRNA MGP_129S1SvImJ_T0089338.1 MGP_129S1SvImJ_G0033748.1 mouse_genomes_project 8 71871449 71883241 - MGP_129S1SvImJ_P0089338 Ano8 protein_coding protein_coding MGP_129S1SvImJ_T0089021.1 MGP_129S1SvImJ_G0033661.1 mouse_genomes_project 8 68490714 68863279 - MGP_129S1SvImJ_P0089021 Csgalnact1 protein_coding protein_coding MGP_129S1SvImJ_T0089022.1 MGP_129S1SvImJ_G0033661.1 mouse_genomes_project 8 68491899 68863247 - MGP_129S1SvImJ_P0089022 Csgalnact1 protein_coding protein_coding MGP_129S1SvImJ_T0089023.1 MGP_129S1SvImJ_G0033661.1 mouse_genomes_project 8 68522104 68863235 - MGP_129S1SvImJ_P0089023 Csgalnact1 protein_coding protein_coding MGP_129S1SvImJ_T0089024.1 MGP_129S1SvImJ_G0033661.1 mouse_genomes_project 8 68601147 68863248 - Csgalnact1 protein_coding processed_transcript MGP_129S1SvImJ_T0089025.1 MGP_129S1SvImJ_G0033661.1 mouse_genomes_project 8 68694108 68863247 - Csgalnact1 protein_coding processed_transcript MGP_129S1SvImJ_T0089026.1 MGP_129S1SvImJ_G0033661.1 mouse_genomes_project 8 68694207 68863248 - Csgalnact1 protein_coding processed_transcript MGP_129S1SvImJ_T0089027.1 MGP_129S1SvImJ_G0033661.1 mouse_genomes_project 8 68783339 68863248 - Csgalnact1 protein_coding processed_transcript MGP_129S1SvImJ_T0010982.1 MGP_129S1SvImJ_G0009098.1 mouse_genomes_project 8 32673244 32673335 - Mir6395 miRNA miRNA MGP_129S1SvImJ_T0090292.1 MGP_129S1SvImJ_G0034065.1 mouse_genomes_project 8 108213797 108215254 + MGP_129S1SvImJ_P0090292 Nrn1l protein_coding protein_coding MGP_129S1SvImJ_T0090293.1 MGP_129S1SvImJ_G0034065.1 mouse_genomes_project 8 108213802 108215248 + MGP_129S1SvImJ_P0090293 Nrn1l protein_coding protein_coding MGP_129S1SvImJ_T0090482.1 MGP_129S1SvImJ_G0034133.1 mouse_genomes_project 8 113712487 113751150 - MGP_129S1SvImJ_P0090482 Ddx19b protein_coding protein_coding MGP_129S1SvImJ_T0090483.1 MGP_129S1SvImJ_G0034133.1 mouse_genomes_project 8 113716841 113743055 - MGP_129S1SvImJ_P0090483 Ddx19b protein_coding protein_coding MGP_129S1SvImJ_T0011044.1 MGP_129S1SvImJ_G0009160.1 mouse_genomes_project 8 123856379 123856470 - Gm22715 miRNA miRNA MGP_129S1SvImJ_T0101368.1 MGP_129S1SvImJ_G0039435.1 mouse_genomes_project 8 16071398 16071527 - Gm25763 snoRNA snoRNA MGP_129S1SvImJ_T0005395.1 MGP_129S1SvImJ_G0004573.1 mouse_genomes_project 8 92874061 92882325 - Gm3235 antisense antisense MGP_129S1SvImJ_T0089010.1 MGP_129S1SvImJ_G0033658.1 mouse_genomes_project 8 67623082 67648320 + MGP_129S1SvImJ_P0089010 Nat3 protein_coding protein_coding MGP_129S1SvImJ_T0089325.1 MGP_129S1SvImJ_G0033745.1 mouse_genomes_project 8 71850638 71857601 - MGP_129S1SvImJ_P0089325 Abhd8 protein_coding protein_coding MGP_129S1SvImJ_T0089477.1 MGP_129S1SvImJ_G0033795.1 mouse_genomes_project 8 75552529 75559233 + MGP_129S1SvImJ_P0089477 Hmox1 protein_coding protein_coding MGP_129S1SvImJ_T0089478.1 MGP_129S1SvImJ_G0033795.1 mouse_genomes_project 8 75552579 75555083 + Hmox1 protein_coding retained_intron MGP_129S1SvImJ_T0089479.1 MGP_129S1SvImJ_G0033795.1 mouse_genomes_project 8 75552788 75555836 + MGP_129S1SvImJ_P0089479 Hmox1 protein_coding protein_coding MGP_129S1SvImJ_T0090535.1 MGP_129S1SvImJ_G0034144.1 mouse_genomes_project 8 114494981 114499468 - MGP_129S1SvImJ_P0090535 Ctrb1 protein_coding protein_coding MGP_129S1SvImJ_T0005420.1 MGP_129S1SvImJ_G0004595.1 mouse_genomes_project 8 125427879 125429876 + BC048644 antisense antisense MGP_129S1SvImJ_T0005421.1 MGP_129S1SvImJ_G0004595.1 mouse_genomes_project 8 125427879 125440415 + BC048644 antisense antisense MGP_129S1SvImJ_T0009102.1 MGP_129S1SvImJ_G0007319.1 mouse_genomes_project 8 32888643 32911082 + lincRNA lincRNA MGP_129S1SvImJ_T0090225.1 MGP_129S1SvImJ_G0034037.1 mouse_genomes_project 8 107562881 107571517 + MGP_129S1SvImJ_P0090225 E2f4 protein_coding protein_coding MGP_129S1SvImJ_T0090874.1 MGP_129S1SvImJ_G0034246.1 mouse_genomes_project 8 126807676 126819344 + MGP_129S1SvImJ_P0090874 Spata33 protein_coding protein_coding MGP_129S1SvImJ_T0090095.1 MGP_129S1SvImJ_G0033987.1 mouse_genomes_project 8 96925568 96969262 - MGP_129S1SvImJ_P0090095 Csnk2a2 protein_coding protein_coding MGP_129S1SvImJ_T0089890.1 MGP_129S1SvImJ_G0033918.1 mouse_genomes_project 8 89349240 89409137 + MGP_129S1SvImJ_P0089890 Adcy7 protein_coding protein_coding MGP_129S1SvImJ_T0089891.1 MGP_129S1SvImJ_G0033918.1 mouse_genomes_project 8 89360403 89409137 + MGP_129S1SvImJ_P0089891 Adcy7 protein_coding protein_coding MGP_129S1SvImJ_T0089892.1 MGP_129S1SvImJ_G0033918.1 mouse_genomes_project 8 89366985 89409137 + MGP_129S1SvImJ_P0089892 Adcy7 protein_coding protein_coding MGP_129S1SvImJ_T0089893.1 MGP_129S1SvImJ_G0033918.1 mouse_genomes_project 8 89372119 89409137 + MGP_129S1SvImJ_P0089893 Adcy7 protein_coding protein_coding MGP_129S1SvImJ_T0016020.1 MGP_129S1SvImJ_G0014109.1 mouse_genomes_project 8 124174780 124175461 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009152.1 MGP_129S1SvImJ_G0007359.1 mouse_genomes_project 8 88486585 88503223 - Gm27016 lincRNA lincRNA MGP_129S1SvImJ_T0009193.1 MGP_129S1SvImJ_G0007387.1 mouse_genomes_project 8 124084205 124093938 + Gm26537 lincRNA lincRNA MGP_129S1SvImJ_T0090912.1 MGP_129S1SvImJ_G0034255.1 mouse_genomes_project 8 127024071 127036706 + MGP_129S1SvImJ_P0090912 Tubb3 protein_coding protein_coding MGP_129S1SvImJ_T0015951.1 MGP_129S1SvImJ_G0014040.1 mouse_genomes_project 8 2119746 2120745 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101366.1 MGP_129S1SvImJ_G0039433.1 mouse_genomes_project 8 15691601 15691711 - Gm25665 snoRNA snoRNA MGP_129S1SvImJ_T0016023.1 MGP_129S1SvImJ_G0014112.1 mouse_genomes_project 8 131469475 131469910 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0088103.1 MGP_129S1SvImJ_G0033356.1 mouse_genomes_project 8 8772866 8781182 + MGP_129S1SvImJ_P0088103 Ing1 protein_coding protein_coding MGP_129S1SvImJ_T0015975.1 MGP_129S1SvImJ_G0014064.1 mouse_genomes_project 8 33715585 33716118 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011729.1 MGP_129S1SvImJ_G0009845.1 mouse_genomes_project 8 1260203 1260483 + Gm26102 misc_RNA misc_RNA MGP_129S1SvImJ_T0088524.1 MGP_129S1SvImJ_G0033503.1 mouse_genomes_project 8 25326362 25363158 - MGP_129S1SvImJ_P0088524 Rab11fip1 protein_coding protein_coding MGP_129S1SvImJ_T0088525.1 MGP_129S1SvImJ_G0033503.1 mouse_genomes_project 8 25326362 25363158 - MGP_129S1SvImJ_P0088525 Rab11fip1 protein_coding protein_coding MGP_129S1SvImJ_T0091022.1 MGP_129S1SvImJ_G0034297.1 mouse_genomes_project 8 130788136 130807594 - MGP_129S1SvImJ_P0091022 Tomm20 protein_coding protein_coding MGP_129S1SvImJ_T0091023.1 MGP_129S1SvImJ_G0034297.1 mouse_genomes_project 8 130793802 130807689 - MGP_129S1SvImJ_P0091023 Tomm20 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0098387.1 MGP_129S1SvImJ_G0036472.1 mouse_genomes_project 8 7008936 7009286 - pseudogene pseudogene MGP_129S1SvImJ_T0009108.1 MGP_129S1SvImJ_G0007325.1 mouse_genomes_project 8 46446006 46615788 - lincRNA lincRNA MGP_129S1SvImJ_T0016008.1 MGP_129S1SvImJ_G0014097.1 mouse_genomes_project 8 90309839 90310454 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0087957.1 MGP_129S1SvImJ_G0033308.1 mouse_genomes_project 8 527822 554129 + MGP_129S1SvImJ_P0087957 Camsap3 protein_coding protein_coding MGP_129S1SvImJ_T0087958.1 MGP_129S1SvImJ_G0033308.1 mouse_genomes_project 8 527822 554129 + MGP_129S1SvImJ_P0087958 Camsap3 protein_coding protein_coding MGP_129S1SvImJ_T0087959.1 MGP_129S1SvImJ_G0033308.1 mouse_genomes_project 8 528179 554104 + MGP_129S1SvImJ_P0087959 Camsap3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0088970.1 MGP_129S1SvImJ_G0033642.1 mouse_genomes_project 8 64596236 64705607 - MGP_129S1SvImJ_P0088970 Cpe protein_coding protein_coding MGP_129S1SvImJ_T0090717.1 MGP_129S1SvImJ_G0034207.1 mouse_genomes_project 8 124561766 124565525 + MGP_129S1SvImJ_P0090717 Foxf1 protein_coding protein_coding MGP_129S1SvImJ_T0011026.1 MGP_129S1SvImJ_G0009142.1 mouse_genomes_project 8 106867958 106868033 - Gm44328 miRNA miRNA MGP_129S1SvImJ_T0088323.1 MGP_129S1SvImJ_G0033438.1 mouse_genomes_project 8 19772762 19772981 + MGP_129S1SvImJ_P0088323 Defb35 protein_coding protein_coding MGP_129S1SvImJ_T0098651.1 MGP_129S1SvImJ_G0036736.1 mouse_genomes_project 8 47106579 47106692 + n-R5s97 rRNA rRNA MGP_129S1SvImJ_T0090602.1 MGP_129S1SvImJ_G0034173.1 mouse_genomes_project 8 120409853 120635778 + MGP_129S1SvImJ_P0090602 Cmip protein_coding protein_coding MGP_129S1SvImJ_T0090603.1 MGP_129S1SvImJ_G0034173.1 mouse_genomes_project 8 120514341 120635778 + MGP_129S1SvImJ_P0090603 Cmip protein_coding protein_coding MGP_129S1SvImJ_T0088072.1 MGP_129S1SvImJ_G0033338.1 mouse_genomes_project 8 1749912 1789508 - MGP_129S1SvImJ_P0088072 Shcbp1 protein_coding protein_coding MGP_129S1SvImJ_T0005349.1 MGP_129S1SvImJ_G0004537.1 mouse_genomes_project 8 10166049 10184929 - Gm15347 antisense antisense MGP_129S1SvImJ_T0018483.1 MGP_129S1SvImJ_G0015708.1 mouse_genomes_project 8 23034811 23039534 + Gm16933 processed_transcript processed_transcript MGP_129S1SvImJ_T0090827.1 MGP_129S1SvImJ_G0034230.1 mouse_genomes_project 8 126119379 126124472 + MGP_129S1SvImJ_P0090827 Cdt1 protein_coding protein_coding MGP_129S1SvImJ_T0101374.1 MGP_129S1SvImJ_G0039441.1 mouse_genomes_project 8 23689582 23689712 + Gm24992 snoRNA snoRNA MGP_129S1SvImJ_T0088610.1 MGP_129S1SvImJ_G0033540.1 mouse_genomes_project 8 34394009 34447239 + MGP_129S1SvImJ_P0088610 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0010993.1 MGP_129S1SvImJ_G0009109.1 mouse_genomes_project 8 71101224 71101282 + Mir7240 miRNA miRNA MGP_129S1SvImJ_T0101398.1 MGP_129S1SvImJ_G0039465.1 mouse_genomes_project 8 73675634 73675774 - Gm22532 snoRNA snoRNA MGP_129S1SvImJ_T0090121.1 MGP_129S1SvImJ_G0033996.1 mouse_genomes_project 8 100693093 101102093 - MGP_129S1SvImJ_P0090121 Cdh8 protein_coding protein_coding MGP_129S1SvImJ_T0090122.1 MGP_129S1SvImJ_G0033996.1 mouse_genomes_project 8 100693505 101102093 - MGP_129S1SvImJ_P0090122 Cdh8 protein_coding protein_coding MGP_129S1SvImJ_T0090123.1 MGP_129S1SvImJ_G0033996.1 mouse_genomes_project 8 100697397 101102105 - MGP_129S1SvImJ_P0090123 Cdh8 protein_coding protein_coding MGP_129S1SvImJ_T0090124.1 MGP_129S1SvImJ_G0033996.1 mouse_genomes_project 8 100697588 101102137 - MGP_129S1SvImJ_P0090124 Cdh8 protein_coding protein_coding MGP_129S1SvImJ_T0090125.1 MGP_129S1SvImJ_G0033996.1 mouse_genomes_project 8 100697588 101101985 - MGP_129S1SvImJ_P0090125 Cdh8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090126.1 MGP_129S1SvImJ_G0033996.1 mouse_genomes_project 8 100847813 100957583 - Cdh8 protein_coding retained_intron MGP_129S1SvImJ_T0090127.1 MGP_129S1SvImJ_G0033996.1 mouse_genomes_project 8 100899097 101102105 - MGP_129S1SvImJ_P0090127 Cdh8 protein_coding protein_coding MGP_129S1SvImJ_T0087945.1 MGP_129S1SvImJ_G0033304.1 mouse_genomes_project 8 409988 414102 + MGP_129S1SvImJ_P0087945 Zfp358 protein_coding protein_coding MGP_129S1SvImJ_T0101396.1 MGP_129S1SvImJ_G0039463.1 mouse_genomes_project 8 70371410 70371536 - Gm25906 snoRNA snoRNA MGP_129S1SvImJ_T0100112.1 MGP_129S1SvImJ_G0038179.1 mouse_genomes_project 8 44929785 44929911 - Gm25309 snRNA snRNA MGP_129S1SvImJ_T0011015.1 MGP_129S1SvImJ_G0009131.1 mouse_genomes_project 8 86059455 86059512 - Gm23388 miRNA miRNA MGP_129S1SvImJ_T0101384.1 MGP_129S1SvImJ_G0039451.1 mouse_genomes_project 8 48227991 48228123 - Gm25830 snoRNA snoRNA MGP_129S1SvImJ_T0088568.1 MGP_129S1SvImJ_G0033527.1 mouse_genomes_project 8 32190096 32243557 + MGP_129S1SvImJ_P0088568 Gtf2e2 protein_coding protein_coding MGP_129S1SvImJ_T0088569.1 MGP_129S1SvImJ_G0033527.1 mouse_genomes_project 8 32190305 32243557 + MGP_129S1SvImJ_P0088569 Gtf2e2 protein_coding protein_coding MGP_129S1SvImJ_T0088570.1 MGP_129S1SvImJ_G0033527.1 mouse_genomes_project 8 32190396 32214848 + MGP_129S1SvImJ_P0088570 Gtf2e2 protein_coding protein_coding MGP_129S1SvImJ_T0088571.1 MGP_129S1SvImJ_G0033527.1 mouse_genomes_project 8 32190574 32196150 + MGP_129S1SvImJ_P0088571 Gtf2e2 protein_coding protein_coding MGP_129S1SvImJ_T0088572.1 MGP_129S1SvImJ_G0033527.1 mouse_genomes_project 8 32190602 32243566 + MGP_129S1SvImJ_P0088572 Gtf2e2 protein_coding protein_coding MGP_129S1SvImJ_T0088573.1 MGP_129S1SvImJ_G0033527.1 mouse_genomes_project 8 32191707 32221882 + MGP_129S1SvImJ_P0088573 Gtf2e2 protein_coding protein_coding MGP_129S1SvImJ_T0088575.1 MGP_129S1SvImJ_G0033527.1 mouse_genomes_project 8 32230420 32243171 + Gtf2e2 protein_coding processed_transcript MGP_129S1SvImJ_T0090409.1 MGP_129S1SvImJ_G0034108.1 mouse_genomes_project 8 112175287 112179330 - MGP_129S1SvImJ_P0090409 Hp protein_coding protein_coding MGP_129S1SvImJ_T0089640.1 MGP_129S1SvImJ_G0033850.1 mouse_genomes_project 8 84908907 84910988 - MGP_129S1SvImJ_P0089640 Rln3 protein_coding protein_coding MGP_129S1SvImJ_T0010985.1 MGP_129S1SvImJ_G0009101.1 mouse_genomes_project 8 39109567 39109622 - Mir7666 miRNA miRNA MGP_129S1SvImJ_T0011007.1 MGP_129S1SvImJ_G0009123.1 mouse_genomes_project 8 85053461 85053550 - Mir181c miRNA miRNA MGP_129S1SvImJ_T0088621.1 MGP_129S1SvImJ_G0033545.1 mouse_genomes_project 8 35241739 35414427 - MGP_129S1SvImJ_P0088621 Dlc1 protein_coding protein_coding MGP_129S1SvImJ_T0088622.1 MGP_129S1SvImJ_G0033545.1 mouse_genomes_project 8 35241739 35291085 - MGP_129S1SvImJ_P0088622 Dlc1 protein_coding protein_coding MGP_129S1SvImJ_T0088623.1 MGP_129S1SvImJ_G0033545.1 mouse_genomes_project 8 35244207 35643936 - MGP_129S1SvImJ_P0088623 Dlc1 protein_coding protein_coding MGP_129S1SvImJ_T0088624.1 MGP_129S1SvImJ_G0033545.1 mouse_genomes_project 8 35246162 35251134 - Dlc1 protein_coding retained_intron MGP_129S1SvImJ_T0088625.1 MGP_129S1SvImJ_G0033545.1 mouse_genomes_project 8 35266723 35291016 - Dlc1 protein_coding retained_intron MGP_129S1SvImJ_T0088626.1 MGP_129S1SvImJ_G0033545.1 mouse_genomes_project 8 35532043 35643851 - Dlc1 protein_coding retained_intron MGP_129S1SvImJ_T0088627.1 MGP_129S1SvImJ_G0033545.1 mouse_genomes_project 8 35543128 35643916 - Dlc1 protein_coding retained_intron MGP_129S1SvImJ_T0088628.1 MGP_129S1SvImJ_G0033545.1 mouse_genomes_project 8 35627096 35643930 - Dlc1 protein_coding retained_intron MGP_129S1SvImJ_T0088629.1 MGP_129S1SvImJ_G0033545.1 mouse_genomes_project 8 35630067 35644636 - MGP_129S1SvImJ_P0088629 Dlc1 protein_coding protein_coding MGP_129S1SvImJ_T0088341.1 MGP_129S1SvImJ_G0033447.1 mouse_genomes_project 8 20037273 20066044 + MGP_129S1SvImJ_P0088341 Vps36 protein_coding protein_coding MGP_129S1SvImJ_T0088342.1 MGP_129S1SvImJ_G0033447.1 mouse_genomes_project 8 20037306 20050917 + Vps36 protein_coding processed_transcript MGP_129S1SvImJ_T0088343.1 MGP_129S1SvImJ_G0033447.1 mouse_genomes_project 8 20062193 20063833 + Vps36 protein_coding retained_intron MGP_129S1SvImJ_T0089952.1 MGP_129S1SvImJ_G0033939.1 mouse_genomes_project 8 94281812 94323790 + MGP_129S1SvImJ_P0089952 Slc6a2 protein_coding protein_coding MGP_129S1SvImJ_T0089953.1 MGP_129S1SvImJ_G0033939.1 mouse_genomes_project 8 94282781 94326532 + MGP_129S1SvImJ_P0089953 Slc6a2 protein_coding protein_coding MGP_129S1SvImJ_T0011727.1 MGP_129S1SvImJ_G0009843.1 mouse_genomes_project 8 682493 682808 - Gm23886 misc_RNA misc_RNA MGP_129S1SvImJ_T0090182.1 MGP_129S1SvImJ_G0034021.1 mouse_genomes_project 8 107116324 107124739 + MGP_129S1SvImJ_P0090182 Ces2e protein_coding protein_coding MGP_129S1SvImJ_T0090183.1 MGP_129S1SvImJ_G0034021.1 mouse_genomes_project 8 107116324 107124739 + MGP_129S1SvImJ_P0090183 Ces2e protein_coding protein_coding MGP_129S1SvImJ_T0089727.1 MGP_129S1SvImJ_G0033873.1 mouse_genomes_project 8 85765450 85770536 - MGP_129S1SvImJ_P0089727 Calr protein_coding protein_coding MGP_129S1SvImJ_T0089728.1 MGP_129S1SvImJ_G0033873.1 mouse_genomes_project 8 85766193 85768517 - Calr protein_coding retained_intron MGP_129S1SvImJ_T0089729.1 MGP_129S1SvImJ_G0033873.1 mouse_genomes_project 8 85769037 85770432 - Calr protein_coding retained_intron MGP_129S1SvImJ_T0089730.1 MGP_129S1SvImJ_G0033873.1 mouse_genomes_project 8 85769351 85770428 - Calr protein_coding retained_intron MGP_129S1SvImJ_T0088463.1 MGP_129S1SvImJ_G0033483.1 mouse_genomes_project 8 23654797 23738624 + MGP_129S1SvImJ_P0088463 Whsc1l1 protein_coding protein_coding MGP_129S1SvImJ_T0088464.1 MGP_129S1SvImJ_G0033483.1 mouse_genomes_project 8 23655480 23736264 + Whsc1l1 protein_coding retained_intron MGP_129S1SvImJ_T0088465.1 MGP_129S1SvImJ_G0033483.1 mouse_genomes_project 8 23655480 23786487 + MGP_129S1SvImJ_P0088465 Whsc1l1 protein_coding protein_coding MGP_129S1SvImJ_T0088466.1 MGP_129S1SvImJ_G0033483.1 mouse_genomes_project 8 23655480 23781788 + MGP_129S1SvImJ_P0088466 Whsc1l1 protein_coding protein_coding MGP_129S1SvImJ_T0088467.1 MGP_129S1SvImJ_G0033483.1 mouse_genomes_project 8 23655480 23739382 + MGP_129S1SvImJ_P0088467 Whsc1l1 protein_coding protein_coding MGP_129S1SvImJ_T0088468.1 MGP_129S1SvImJ_G0033483.1 mouse_genomes_project 8 23655515 23724956 + Whsc1l1 protein_coding retained_intron MGP_129S1SvImJ_T0088469.1 MGP_129S1SvImJ_G0033483.1 mouse_genomes_project 8 23697915 23786487 + MGP_129S1SvImJ_P0088469 Whsc1l1 protein_coding protein_coding MGP_129S1SvImJ_T0088470.1 MGP_129S1SvImJ_G0033483.1 mouse_genomes_project 8 23735792 23739360 + Whsc1l1 protein_coding retained_intron MGP_129S1SvImJ_T0088471.1 MGP_129S1SvImJ_G0033483.1 mouse_genomes_project 8 23755309 23781788 + MGP_129S1SvImJ_P0088471 Whsc1l1 protein_coding protein_coding MGP_129S1SvImJ_T0088472.1 MGP_129S1SvImJ_G0033483.1 mouse_genomes_project 8 23759660 23773920 + Whsc1l1 protein_coding retained_intron MGP_129S1SvImJ_T0088473.1 MGP_129S1SvImJ_G0033483.1 mouse_genomes_project 8 23761090 23762117 + Whsc1l1 protein_coding retained_intron MGP_129S1SvImJ_T0088988.1 MGP_129S1SvImJ_G0033650.1 mouse_genomes_project 8 65634059 66533890 + protein_coding processed_transcript MGP_129S1SvImJ_T0088989.1 MGP_129S1SvImJ_G0033650.1 mouse_genomes_project 8 65634168 66533301 + MGP_129S1SvImJ_P0088989 protein_coding protein_coding MGP_129S1SvImJ_T0088990.1 MGP_129S1SvImJ_G0033650.1 mouse_genomes_project 8 65634184 66533643 + MGP_129S1SvImJ_P0088990 protein_coding protein_coding MGP_129S1SvImJ_T0088991.1 MGP_129S1SvImJ_G0033650.1 mouse_genomes_project 8 65634196 65992238 + protein_coding retained_intron MGP_129S1SvImJ_T0088992.1 MGP_129S1SvImJ_G0033650.1 mouse_genomes_project 8 65634245 66535567 + MGP_129S1SvImJ_P0088992 protein_coding protein_coding MGP_129S1SvImJ_T0088993.1 MGP_129S1SvImJ_G0033650.1 mouse_genomes_project 8 65634684 66534357 + MGP_129S1SvImJ_P0088993 protein_coding protein_coding MGP_129S1SvImJ_T0088994.1 MGP_129S1SvImJ_G0033650.1 mouse_genomes_project 8 65991066 66535555 + MGP_129S1SvImJ_P0088994 protein_coding protein_coding MGP_129S1SvImJ_T0088995.1 MGP_129S1SvImJ_G0033650.1 mouse_genomes_project 8 66157814 66535555 + MGP_129S1SvImJ_P0088995 protein_coding protein_coding MGP_129S1SvImJ_T0088996.1 MGP_129S1SvImJ_G0033650.1 mouse_genomes_project 8 66157814 66535555 + MGP_129S1SvImJ_P0088996 protein_coding protein_coding MGP_129S1SvImJ_T0088997.1 MGP_129S1SvImJ_G0033650.1 mouse_genomes_project 8 66447666 66534351 + MGP_129S1SvImJ_P0088997 protein_coding protein_coding MGP_129S1SvImJ_T0088998.1 MGP_129S1SvImJ_G0033650.1 mouse_genomes_project 8 66447673 66534361 + MGP_129S1SvImJ_P0088998 protein_coding protein_coding MGP_129S1SvImJ_T0089587.1 MGP_129S1SvImJ_G0033836.1 mouse_genomes_project 8 84490606 84504300 + MGP_129S1SvImJ_P0089587 Gipc1 protein_coding protein_coding MGP_129S1SvImJ_T0011733.1 MGP_129S1SvImJ_G0009849.1 mouse_genomes_project 8 9645692 9646009 + Gm22207 misc_RNA misc_RNA MGP_129S1SvImJ_T0090976.1 MGP_129S1SvImJ_G0034278.1 mouse_genomes_project 8 128501542 128546958 + MGP_129S1SvImJ_P0090976 Trim67 protein_coding protein_coding MGP_129S1SvImJ_T0090977.1 MGP_129S1SvImJ_G0034278.1 mouse_genomes_project 8 128501615 128546969 + MGP_129S1SvImJ_P0090977 Trim67 protein_coding protein_coding MGP_129S1SvImJ_T0088828.1 MGP_129S1SvImJ_G0033598.1 mouse_genomes_project 8 46850009 46857985 - MGP_129S1SvImJ_P0088828 Ing2 protein_coding protein_coding MGP_129S1SvImJ_T0088829.1 MGP_129S1SvImJ_G0033598.1 mouse_genomes_project 8 46850009 46856516 - MGP_129S1SvImJ_P0088829 Ing2 protein_coding protein_coding MGP_129S1SvImJ_T0088830.1 MGP_129S1SvImJ_G0033598.1 mouse_genomes_project 8 46851586 46858383 - MGP_129S1SvImJ_P0088830 Ing2 protein_coding protein_coding MGP_129S1SvImJ_T0089657.1 MGP_129S1SvImJ_G0033860.1 mouse_genomes_project 8 85125733 85130198 - MGP_129S1SvImJ_P0089657 D8Ertd738e protein_coding protein_coding MGP_129S1SvImJ_T0005429.1 MGP_129S1SvImJ_G0004603.1 mouse_genomes_project 8 130396007 130424268 + Gm26759 antisense antisense MGP_129S1SvImJ_T0005352.1 MGP_129S1SvImJ_G0004539.1 mouse_genomes_project 8 10207588 10224225 - Gm15351 antisense antisense MGP_129S1SvImJ_T0005353.1 MGP_129S1SvImJ_G0004539.1 mouse_genomes_project 8 10221123 10224364 - Gm15351 antisense antisense MGP_129S1SvImJ_T0005354.1 MGP_129S1SvImJ_G0004539.1 mouse_genomes_project 8 10223189 10224079 - Gm15351 antisense antisense MGP_129S1SvImJ_T0098657.1 MGP_129S1SvImJ_G0036742.1 mouse_genomes_project 8 131506428 131506546 + Gm22968 rRNA rRNA MGP_129S1SvImJ_T0088809.1 MGP_129S1SvImJ_G0033592.1 mouse_genomes_project 8 45862531 45979117 + MGP_129S1SvImJ_P0088809 Irf2 protein_coding protein_coding MGP_129S1SvImJ_T0088234.1 MGP_129S1SvImJ_G0033394.1 mouse_genomes_project 8 11471745 11473875 + MGP_129S1SvImJ_P0088234 protein_coding protein_coding MGP_129S1SvImJ_T0009139.1 MGP_129S1SvImJ_G0007353.1 mouse_genomes_project 8 88171879 88203311 - Gm10637 lincRNA lincRNA MGP_129S1SvImJ_T0009140.1 MGP_129S1SvImJ_G0007353.1 mouse_genomes_project 8 88198572 88203322 - Gm10637 lincRNA lincRNA MGP_129S1SvImJ_T0009089.1 MGP_129S1SvImJ_G0007310.1 mouse_genomes_project 8 25832459 25848981 + Gm1698 lincRNA lincRNA MGP_129S1SvImJ_T0011009.1 MGP_129S1SvImJ_G0009125.1 mouse_genomes_project 8 85084352 85084439 + Mir27a miRNA miRNA MGP_129S1SvImJ_T0088545.1 MGP_129S1SvImJ_G0033514.1 mouse_genomes_project 8 29539479 29553130 + MGP_129S1SvImJ_P0088545 Tti2 protein_coding protein_coding MGP_129S1SvImJ_T0090227.1 MGP_129S1SvImJ_G0034039.1 mouse_genomes_project 8 107580850 107598550 - MGP_129S1SvImJ_P0090227 protein_coding protein_coding MGP_129S1SvImJ_T0088611.1 MGP_129S1SvImJ_G0033541.1 mouse_genomes_project 8 34453915 34455768 - MGP_129S1SvImJ_P0088611 Cldn23 protein_coding protein_coding MGP_129S1SvImJ_T0088863.1 MGP_129S1SvImJ_G0033614.1 mouse_genomes_project 8 54287572 54378543 - MGP_129S1SvImJ_P0088863 Wdr17 protein_coding protein_coding MGP_129S1SvImJ_T0088864.1 MGP_129S1SvImJ_G0033614.1 mouse_genomes_project 8 54287750 54384252 - MGP_129S1SvImJ_P0088864 Wdr17 protein_coding protein_coding MGP_129S1SvImJ_T0088865.1 MGP_129S1SvImJ_G0033614.1 mouse_genomes_project 8 54288130 54306398 - Wdr17 protein_coding retained_intron MGP_129S1SvImJ_T0088866.1 MGP_129S1SvImJ_G0033614.1 mouse_genomes_project 8 54288136 54384232 - MGP_129S1SvImJ_P0088866 Wdr17 protein_coding protein_coding MGP_129S1SvImJ_T0088867.1 MGP_129S1SvImJ_G0033614.1 mouse_genomes_project 8 54288270 54384209 - MGP_129S1SvImJ_P0088867 Wdr17 protein_coding protein_coding MGP_129S1SvImJ_T0088868.1 MGP_129S1SvImJ_G0033614.1 mouse_genomes_project 8 54307004 54311803 - Wdr17 protein_coding retained_intron MGP_129S1SvImJ_T0088869.1 MGP_129S1SvImJ_G0033614.1 mouse_genomes_project 8 54323837 54351810 - MGP_129S1SvImJ_P0088869 Wdr17 protein_coding protein_coding MGP_129S1SvImJ_T0088870.1 MGP_129S1SvImJ_G0033614.1 mouse_genomes_project 8 54323881 54384214 - Wdr17 protein_coding processed_transcript MGP_129S1SvImJ_T0088871.1 MGP_129S1SvImJ_G0033614.1 mouse_genomes_project 8 54349100 54384212 - MGP_129S1SvImJ_P0088871 Wdr17 protein_coding protein_coding MGP_129S1SvImJ_T0088872.1 MGP_129S1SvImJ_G0033614.1 mouse_genomes_project 8 54349432 54384338 - Wdr17 protein_coding processed_transcript MGP_129S1SvImJ_T0088873.1 MGP_129S1SvImJ_G0033614.1 mouse_genomes_project 8 54354981 54538510 - MGP_129S1SvImJ_P0088873 Wdr17 protein_coding protein_coding MGP_129S1SvImJ_T0088874.1 MGP_129S1SvImJ_G0033614.1 mouse_genomes_project 8 54358021 54368364 - MGP_129S1SvImJ_P0088874 Wdr17 protein_coding protein_coding MGP_129S1SvImJ_T0016005.1 MGP_129S1SvImJ_G0014094.1 mouse_genomes_project 8 86105384 86105609 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0089239.1 MGP_129S1SvImJ_G0033712.1 mouse_genomes_project 8 70811635 70868440 + MGP_129S1SvImJ_P0089239 Ell protein_coding protein_coding MGP_129S1SvImJ_T0015947.1 MGP_129S1SvImJ_G0014036.1 mouse_genomes_project 8 951424 958957 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0089848.1 MGP_129S1SvImJ_G0033907.1 mouse_genomes_project 8 87450060 87548636 - MGP_129S1SvImJ_P0089848 Abcc12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089849.1 MGP_129S1SvImJ_G0033907.1 mouse_genomes_project 8 87473782 87548667 - MGP_129S1SvImJ_P0089849 Abcc12 protein_coding protein_coding MGP_129S1SvImJ_T0089850.1 MGP_129S1SvImJ_G0033907.1 mouse_genomes_project 8 87473786 87505065 - MGP_129S1SvImJ_P0089850 Abcc12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089851.1 MGP_129S1SvImJ_G0033907.1 mouse_genomes_project 8 87474044 87539461 - MGP_129S1SvImJ_P0089851 Abcc12 protein_coding protein_coding MGP_129S1SvImJ_T0089852.1 MGP_129S1SvImJ_G0033907.1 mouse_genomes_project 8 87474044 87539461 - MGP_129S1SvImJ_P0089852 Abcc12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089853.1 MGP_129S1SvImJ_G0033907.1 mouse_genomes_project 8 87474044 87539461 - MGP_129S1SvImJ_P0089853 Abcc12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089854.1 MGP_129S1SvImJ_G0033907.1 mouse_genomes_project 8 87504278 87548667 - MGP_129S1SvImJ_P0089854 Abcc12 protein_coding protein_coding MGP_129S1SvImJ_T0090067.1 MGP_129S1SvImJ_G0033976.1 mouse_genomes_project 8 96428447 96467037 + MGP_129S1SvImJ_P0090067 Adgrg1 protein_coding protein_coding MGP_129S1SvImJ_T0090068.1 MGP_129S1SvImJ_G0033976.1 mouse_genomes_project 8 96435805 96467037 + MGP_129S1SvImJ_P0090068 Adgrg1 protein_coding protein_coding MGP_129S1SvImJ_T0088516.1 MGP_129S1SvImJ_G0033499.1 mouse_genomes_project 8 25197585 25216776 + MGP_129S1SvImJ_P0088516 Erlin2 protein_coding protein_coding MGP_129S1SvImJ_T0088616.1 MGP_129S1SvImJ_G0033544.1 mouse_genomes_project 8 35117803 35178432 + MGP_129S1SvImJ_P0088616 6430573F11Rik protein_coding protein_coding MGP_129S1SvImJ_T0088617.1 MGP_129S1SvImJ_G0033544.1 mouse_genomes_project 8 35117829 35179793 + MGP_129S1SvImJ_P0088617 6430573F11Rik protein_coding protein_coding MGP_129S1SvImJ_T0088618.1 MGP_129S1SvImJ_G0033544.1 mouse_genomes_project 8 35118437 35177067 + MGP_129S1SvImJ_P0088618 6430573F11Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088619.1 MGP_129S1SvImJ_G0033544.1 mouse_genomes_project 8 35153092 35178485 + MGP_129S1SvImJ_P0088619 6430573F11Rik protein_coding protein_coding MGP_129S1SvImJ_T0088620.1 MGP_129S1SvImJ_G0033544.1 mouse_genomes_project 8 35171129 35178069 + 6430573F11Rik protein_coding processed_transcript MGP_129S1SvImJ_T0018486.1 MGP_129S1SvImJ_G0015710.1 mouse_genomes_project 8 39849509 39856220 + B430010I23Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018487.1 MGP_129S1SvImJ_G0015710.1 mouse_genomes_project 8 39849779 39852579 + B430010I23Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0089823.1 MGP_129S1SvImJ_G0033900.1 mouse_genomes_project 8 86250134 86287403 - MGP_129S1SvImJ_P0089823 Mylk3 protein_coding protein_coding MGP_129S1SvImJ_T0089824.1 MGP_129S1SvImJ_G0033900.1 mouse_genomes_project 8 86250278 86307699 - MGP_129S1SvImJ_P0089824 Mylk3 protein_coding protein_coding MGP_129S1SvImJ_T0089825.1 MGP_129S1SvImJ_G0033900.1 mouse_genomes_project 8 86252937 86287426 - MGP_129S1SvImJ_P0089825 Mylk3 protein_coding protein_coding MGP_129S1SvImJ_T0089826.1 MGP_129S1SvImJ_G0033900.1 mouse_genomes_project 8 86280413 86312884 - MGP_129S1SvImJ_P0089826 Mylk3 protein_coding protein_coding MGP_129S1SvImJ_T0089827.1 MGP_129S1SvImJ_G0033900.1 mouse_genomes_project 8 86281588 86307755 - Mylk3 protein_coding retained_intron MGP_129S1SvImJ_T0009153.1 MGP_129S1SvImJ_G0007360.1 mouse_genomes_project 8 88507821 88509004 - 1700120C18Rik lincRNA lincRNA MGP_129S1SvImJ_T0009110.1 MGP_129S1SvImJ_G0007327.1 mouse_genomes_project 8 57044641 57053150 + lincRNA lincRNA MGP_129S1SvImJ_T0090367.1 MGP_129S1SvImJ_G0034095.1 mouse_genomes_project 8 109469650 109475994 + MGP_129S1SvImJ_P0090367 Nip7 protein_coding protein_coding MGP_129S1SvImJ_T0090368.1 MGP_129S1SvImJ_G0034095.1 mouse_genomes_project 8 109469650 109475994 + MGP_129S1SvImJ_P0090368 Nip7 protein_coding protein_coding MGP_129S1SvImJ_T0088304.1 MGP_129S1SvImJ_G0033420.1 mouse_genomes_project 8 16986924 16987137 - MGP_129S1SvImJ_P0088304 Defb8 protein_coding protein_coding MGP_129S1SvImJ_T0088302.1 MGP_129S1SvImJ_G0033418.1 mouse_genomes_project 8 16715939 16718137 + MGP_129S1SvImJ_P0088302 Defb46 protein_coding protein_coding MGP_129S1SvImJ_T0090570.1 MGP_129S1SvImJ_G0034160.1 mouse_genomes_project 8 117388929 117403440 + MGP_129S1SvImJ_P0090570 Clec3a protein_coding protein_coding MGP_129S1SvImJ_T0009208.1 MGP_129S1SvImJ_G0007398.1 mouse_genomes_project 8 125375089 125375916 - lincRNA lincRNA MGP_129S1SvImJ_T0098397.1 MGP_129S1SvImJ_G0036482.1 mouse_genomes_project 8 119874307 119875643 - pseudogene pseudogene MGP_129S1SvImJ_T0088215.1 MGP_129S1SvImJ_G0033385.1 mouse_genomes_project 8 11075019 11102372 + MGP_129S1SvImJ_P0088215 protein_coding protein_coding MGP_129S1SvImJ_T0009132.1 MGP_129S1SvImJ_G0007346.1 mouse_genomes_project 8 85084600 85085287 + Gm26532 lincRNA lincRNA MGP_129S1SvImJ_T0005403.1 MGP_129S1SvImJ_G0004579.1 mouse_genomes_project 8 108258076 108271030 + Gm16156 antisense antisense MGP_129S1SvImJ_T0009072.1 MGP_129S1SvImJ_G0007297.1 mouse_genomes_project 8 4424018 4486299 + Gm17215 lincRNA lincRNA MGP_129S1SvImJ_T0090316.1 MGP_129S1SvImJ_G0034075.1 mouse_genomes_project 8 108399050 108474197 + MGP_129S1SvImJ_P0090316 Nfatc3 protein_coding protein_coding MGP_129S1SvImJ_T0090317.1 MGP_129S1SvImJ_G0034075.1 mouse_genomes_project 8 108399338 108462019 + MGP_129S1SvImJ_P0090317 Nfatc3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0090673.1 MGP_129S1SvImJ_G0034198.1 mouse_genomes_project 8 123495849 123558206 + MGP_129S1SvImJ_P0090673 6430548M08Rik protein_coding protein_coding MGP_129S1SvImJ_T0090674.1 MGP_129S1SvImJ_G0034198.1 mouse_genomes_project 8 123495849 123544772 + MGP_129S1SvImJ_P0090674 6430548M08Rik protein_coding protein_coding MGP_129S1SvImJ_T0090675.1 MGP_129S1SvImJ_G0034198.1 mouse_genomes_project 8 123495850 123558204 + MGP_129S1SvImJ_P0090675 6430548M08Rik protein_coding protein_coding MGP_129S1SvImJ_T0090676.1 MGP_129S1SvImJ_G0034198.1 mouse_genomes_project 8 123532945 123534001 + MGP_129S1SvImJ_P0090676 6430548M08Rik protein_coding protein_coding MGP_129S1SvImJ_T0090677.1 MGP_129S1SvImJ_G0034198.1 mouse_genomes_project 8 123533186 123542743 + MGP_129S1SvImJ_P0090677 6430548M08Rik protein_coding protein_coding MGP_129S1SvImJ_T0090678.1 MGP_129S1SvImJ_G0034198.1 mouse_genomes_project 8 123533411 123555788 + MGP_129S1SvImJ_P0090678 6430548M08Rik protein_coding protein_coding MGP_129S1SvImJ_T0090679.1 MGP_129S1SvImJ_G0034198.1 mouse_genomes_project 8 123548763 123554286 + 6430548M08Rik protein_coding processed_transcript MGP_129S1SvImJ_T0009178.1 MGP_129S1SvImJ_G0007375.1 mouse_genomes_project 8 107419840 107425446 + Gm3830 lincRNA lincRNA MGP_129S1SvImJ_T0088787.1 MGP_129S1SvImJ_G0033587.1 mouse_genomes_project 8 45392126 45394752 - MGP_129S1SvImJ_P0088787 Helt protein_coding protein_coding MGP_129S1SvImJ_T0089644.1 MGP_129S1SvImJ_G0033854.1 mouse_genomes_project 8 84968553 84977651 - MGP_129S1SvImJ_P0089644 Dcaf15 protein_coding protein_coding MGP_129S1SvImJ_T0089645.1 MGP_129S1SvImJ_G0033854.1 mouse_genomes_project 8 84968931 84977626 - MGP_129S1SvImJ_P0089645 Dcaf15 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089641.1 MGP_129S1SvImJ_G0033851.1 mouse_genomes_project 8 84934832 84936411 - MGP_129S1SvImJ_P0089641 Gm10643 protein_coding protein_coding MGP_129S1SvImJ_T0089058.1 MGP_129S1SvImJ_G0033668.1 mouse_genomes_project 8 69440285 69478781 + MGP_129S1SvImJ_P0089058 D130040H23Rik protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089059.1 MGP_129S1SvImJ_G0033668.1 mouse_genomes_project 8 69476487 69478863 + MGP_129S1SvImJ_P0089059 D130040H23Rik protein_coding protein_coding MGP_129S1SvImJ_T0090510.1 MGP_129S1SvImJ_G0034139.1 mouse_genomes_project 8 114118109 114141901 - Fa2h protein_coding processed_transcript MGP_129S1SvImJ_T0090511.1 MGP_129S1SvImJ_G0034139.1 mouse_genomes_project 8 114118115 114170893 - MGP_129S1SvImJ_P0090511 Fa2h protein_coding protein_coding MGP_129S1SvImJ_T0090512.1 MGP_129S1SvImJ_G0034139.1 mouse_genomes_project 8 114118739 114121032 - Fa2h protein_coding processed_transcript MGP_129S1SvImJ_T0090513.1 MGP_129S1SvImJ_G0034139.1 mouse_genomes_project 8 114120444 114170887 - Fa2h protein_coding retained_intron MGP_129S1SvImJ_T0090986.1 MGP_129S1SvImJ_G0034282.1 mouse_genomes_project 8 128612399 128620547 + MGP_129S1SvImJ_P0090986 Sprtn protein_coding protein_coding MGP_129S1SvImJ_T0090318.1 MGP_129S1SvImJ_G0034076.1 mouse_genomes_project 8 108473978 108480634 - MGP_129S1SvImJ_P0090318 Esrp2 protein_coding protein_coding MGP_129S1SvImJ_T0090319.1 MGP_129S1SvImJ_G0034076.1 mouse_genomes_project 8 108475884 108480473 - MGP_129S1SvImJ_P0090319 Esrp2 protein_coding protein_coding MGP_129S1SvImJ_T0090320.1 MGP_129S1SvImJ_G0034076.1 mouse_genomes_project 8 108476387 108476735 - Esrp2 protein_coding processed_transcript MGP_129S1SvImJ_T0090321.1 MGP_129S1SvImJ_G0034076.1 mouse_genomes_project 8 108476474 108478384 - Esrp2 protein_coding retained_intron MGP_129S1SvImJ_T0090322.1 MGP_129S1SvImJ_G0034076.1 mouse_genomes_project 8 108476927 108477788 - Esrp2 protein_coding retained_intron MGP_129S1SvImJ_T0090323.1 MGP_129S1SvImJ_G0034076.1 mouse_genomes_project 8 108477187 108477788 - Esrp2 protein_coding retained_intron MGP_129S1SvImJ_T0090324.1 MGP_129S1SvImJ_G0034076.1 mouse_genomes_project 8 108477461 108478756 - Esrp2 protein_coding retained_intron MGP_129S1SvImJ_T0090325.1 MGP_129S1SvImJ_G0034076.1 mouse_genomes_project 8 108477618 108478601 - Esrp2 protein_coding retained_intron MGP_129S1SvImJ_T0090326.1 MGP_129S1SvImJ_G0034076.1 mouse_genomes_project 8 108479842 108480345 - Esrp2 protein_coding retained_intron MGP_129S1SvImJ_T0088409.1 MGP_129S1SvImJ_G0033471.1 mouse_genomes_project 8 22580542 22591974 - MGP_129S1SvImJ_P0088409 Ido1 protein_coding protein_coding MGP_129S1SvImJ_T0088410.1 MGP_129S1SvImJ_G0033471.1 mouse_genomes_project 8 22580542 22593317 - MGP_129S1SvImJ_P0088410 Ido1 protein_coding protein_coding MGP_129S1SvImJ_T0088424.1 MGP_129S1SvImJ_G0033474.1 mouse_genomes_project 8 22731754 22799398 - MGP_129S1SvImJ_P0088424 Adam5 protein_coding protein_coding MGP_129S1SvImJ_T0088425.1 MGP_129S1SvImJ_G0033474.1 mouse_genomes_project 8 22731754 22808001 - MGP_129S1SvImJ_P0088425 Adam5 protein_coding protein_coding MGP_129S1SvImJ_T0088426.1 MGP_129S1SvImJ_G0033474.1 mouse_genomes_project 8 22731863 22807927 - Adam5 protein_coding processed_transcript MGP_129S1SvImJ_T0088427.1 MGP_129S1SvImJ_G0033474.1 mouse_genomes_project 8 22737723 22808311 - MGP_129S1SvImJ_P0088427 Adam5 protein_coding protein_coding MGP_129S1SvImJ_T0089717.1 MGP_129S1SvImJ_G0033869.1 mouse_genomes_project 8 85636590 85640430 + MGP_129S1SvImJ_P0089717 G430095P16Rik protein_coding protein_coding MGP_129S1SvImJ_T0015987.1 MGP_129S1SvImJ_G0014076.1 mouse_genomes_project 8 63764213 63765215 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0089271.1 MGP_129S1SvImJ_G0033730.1 mouse_genomes_project 8 71152440 71169093 - MGP_129S1SvImJ_P0089271 Kcnn1 protein_coding protein_coding MGP_129S1SvImJ_T0089272.1 MGP_129S1SvImJ_G0033730.1 mouse_genomes_project 8 71152440 71169093 - MGP_129S1SvImJ_P0089272 Kcnn1 protein_coding protein_coding MGP_129S1SvImJ_T0089273.1 MGP_129S1SvImJ_G0033730.1 mouse_genomes_project 8 71153563 71169041 - MGP_129S1SvImJ_P0089273 Kcnn1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089868.1 MGP_129S1SvImJ_G0033914.1 mouse_genomes_project 8 88683902 88929475 - MGP_129S1SvImJ_P0089868 Zfp423 protein_coding protein_coding MGP_129S1SvImJ_T0089869.1 MGP_129S1SvImJ_G0033914.1 mouse_genomes_project 8 88684569 88993571 - MGP_129S1SvImJ_P0089869 Zfp423 protein_coding protein_coding MGP_129S1SvImJ_T0089870.1 MGP_129S1SvImJ_G0033914.1 mouse_genomes_project 8 88810606 88988165 - MGP_129S1SvImJ_P0089870 Zfp423 protein_coding protein_coding MGP_129S1SvImJ_T0089871.1 MGP_129S1SvImJ_G0033914.1 mouse_genomes_project 8 88810761 88832923 - MGP_129S1SvImJ_P0089871 Zfp423 protein_coding protein_coding MGP_129S1SvImJ_T0089872.1 MGP_129S1SvImJ_G0033914.1 mouse_genomes_project 8 88810930 88978348 - Zfp423 protein_coding processed_transcript MGP_129S1SvImJ_T0089873.1 MGP_129S1SvImJ_G0033914.1 mouse_genomes_project 8 88810947 88983027 - Zfp423 protein_coding processed_transcript MGP_129S1SvImJ_T0090262.1 MGP_129S1SvImJ_G0034051.1 mouse_genomes_project 8 107902921 107919873 + MGP_129S1SvImJ_P0090262 Fam65a protein_coding protein_coding MGP_129S1SvImJ_T0002352.1 MGP_129S1SvImJ_G0002263.1 mouse_genomes_project 8 21110067 21110918 + TEC TEC MGP_129S1SvImJ_T0011012.1 MGP_129S1SvImJ_G0009128.1 mouse_genomes_project 8 85793422 85793484 + Mir7069 miRNA miRNA MGP_129S1SvImJ_T0090362.1 MGP_129S1SvImJ_G0034094.1 mouse_genomes_project 8 109455519 109469463 - MGP_129S1SvImJ_P0090362 Cog8 protein_coding protein_coding MGP_129S1SvImJ_T0090363.1 MGP_129S1SvImJ_G0034094.1 mouse_genomes_project 8 109455525 109469458 - MGP_129S1SvImJ_P0090363 Cog8 protein_coding protein_coding MGP_129S1SvImJ_T0090365.1 MGP_129S1SvImJ_G0034094.1 mouse_genomes_project 8 109465455 109467035 - Cog8 protein_coding retained_intron MGP_129S1SvImJ_T0090366.1 MGP_129S1SvImJ_G0034094.1 mouse_genomes_project 8 109465685 109469272 - MGP_129S1SvImJ_P0090366 Cog8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0010999.1 MGP_129S1SvImJ_G0009115.1 mouse_genomes_project 8 74140583 74140692 - Gm23255 miRNA miRNA MGP_129S1SvImJ_T0090930.1 MGP_129S1SvImJ_G0034259.1 mouse_genomes_project 8 127124938 127142749 + MGP_129S1SvImJ_P0090930 Gas8 protein_coding protein_coding MGP_129S1SvImJ_T0090595.1 MGP_129S1SvImJ_G0034170.1 mouse_genomes_project 8 120117639 120213997 - MGP_129S1SvImJ_P0090595 Pkd1l2 protein_coding protein_coding MGP_129S1SvImJ_T0090596.1 MGP_129S1SvImJ_G0034170.1 mouse_genomes_project 8 120129440 120145718 - Pkd1l2 protein_coding retained_intron MGP_129S1SvImJ_T0090597.1 MGP_129S1SvImJ_G0034170.1 mouse_genomes_project 8 120145172 120153110 - Pkd1l2 protein_coding retained_intron MGP_129S1SvImJ_T0090448.1 MGP_129S1SvImJ_G0034126.1 mouse_genomes_project 8 113400547 113422857 + MGP_129S1SvImJ_P0090448 Mtss1l protein_coding protein_coding MGP_129S1SvImJ_T0090449.1 MGP_129S1SvImJ_G0034126.1 mouse_genomes_project 8 113401928 113423327 + MGP_129S1SvImJ_P0090449 Mtss1l protein_coding protein_coding MGP_129S1SvImJ_T0090450.1 MGP_129S1SvImJ_G0034126.1 mouse_genomes_project 8 113407871 113413467 + Mtss1l protein_coding processed_transcript MGP_129S1SvImJ_T0090451.1 MGP_129S1SvImJ_G0034126.1 mouse_genomes_project 8 113408800 113419110 + MGP_129S1SvImJ_P0090451 Mtss1l protein_coding protein_coding MGP_129S1SvImJ_T0090452.1 MGP_129S1SvImJ_G0034126.1 mouse_genomes_project 8 113408811 113419530 + MGP_129S1SvImJ_P0090452 Mtss1l protein_coding protein_coding MGP_129S1SvImJ_T0090453.1 MGP_129S1SvImJ_G0034126.1 mouse_genomes_project 8 113418573 113419838 + Mtss1l protein_coding retained_intron MGP_129S1SvImJ_T0005394.1 MGP_129S1SvImJ_G0004572.1 mouse_genomes_project 8 86266162 86266586 + antisense antisense MGP_129S1SvImJ_T0089885.1 MGP_129S1SvImJ_G0033917.1 mouse_genomes_project 8 89272564 89334557 + MGP_129S1SvImJ_P0089885 Papd5 protein_coding protein_coding MGP_129S1SvImJ_T0089886.1 MGP_129S1SvImJ_G0033917.1 mouse_genomes_project 8 89272564 89334557 + MGP_129S1SvImJ_P0089886 Papd5 protein_coding protein_coding MGP_129S1SvImJ_T0089887.1 MGP_129S1SvImJ_G0033917.1 mouse_genomes_project 8 89272565 89334557 + MGP_129S1SvImJ_P0089887 Papd5 protein_coding protein_coding MGP_129S1SvImJ_T0089888.1 MGP_129S1SvImJ_G0033917.1 mouse_genomes_project 8 89319539 89324640 + Papd5 protein_coding retained_intron MGP_129S1SvImJ_T0089889.1 MGP_129S1SvImJ_G0033917.1 mouse_genomes_project 8 89327390 89332834 + MGP_129S1SvImJ_P0089889 Papd5 protein_coding protein_coding MGP_129S1SvImJ_T0090439.1 MGP_129S1SvImJ_G0034118.1 mouse_genomes_project 8 112653038 112668707 - MGP_129S1SvImJ_P0090439 Chst4 protein_coding protein_coding MGP_129S1SvImJ_T0016001.1 MGP_129S1SvImJ_G0014090.1 mouse_genomes_project 8 82558785 82559136 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0090735.1 MGP_129S1SvImJ_G0034211.1 mouse_genomes_project 8 125042739 125058698 - MGP_129S1SvImJ_P0090735 1700018B08Rik protein_coding protein_coding MGP_129S1SvImJ_T0090736.1 MGP_129S1SvImJ_G0034211.1 mouse_genomes_project 8 125042787 125058613 - MGP_129S1SvImJ_P0090736 1700018B08Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090737.1 MGP_129S1SvImJ_G0034211.1 mouse_genomes_project 8 125042787 125058613 - MGP_129S1SvImJ_P0090737 1700018B08Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090738.1 MGP_129S1SvImJ_G0034211.1 mouse_genomes_project 8 125043773 125061064 - MGP_129S1SvImJ_P0090738 1700018B08Rik protein_coding protein_coding MGP_129S1SvImJ_T0010988.1 MGP_129S1SvImJ_G0009104.1 mouse_genomes_project 8 56275492 56275601 + Gm25992 miRNA miRNA MGP_129S1SvImJ_T0090426.1 MGP_129S1SvImJ_G0034114.1 mouse_genomes_project 8 112390414 112480537 + MGP_129S1SvImJ_P0090426 Ap1g1 protein_coding protein_coding MGP_129S1SvImJ_T0090427.1 MGP_129S1SvImJ_G0034114.1 mouse_genomes_project 8 112390757 112418736 + Ap1g1 protein_coding processed_transcript MGP_129S1SvImJ_T0090428.1 MGP_129S1SvImJ_G0034114.1 mouse_genomes_project 8 112390766 112477691 + MGP_129S1SvImJ_P0090428 Ap1g1 protein_coding protein_coding MGP_129S1SvImJ_T0090429.1 MGP_129S1SvImJ_G0034114.1 mouse_genomes_project 8 112458314 112465928 + Ap1g1 protein_coding retained_intron MGP_129S1SvImJ_T0090430.1 MGP_129S1SvImJ_G0034114.1 mouse_genomes_project 8 112474780 112476623 + Ap1g1 protein_coding retained_intron MGP_129S1SvImJ_T0090431.1 MGP_129S1SvImJ_G0034114.1 mouse_genomes_project 8 112479440 112480536 + MGP_129S1SvImJ_P0090431 Ap1g1 protein_coding protein_coding MGP_129S1SvImJ_T0088356.1 MGP_129S1SvImJ_G0033457.1 mouse_genomes_project 8 20519395 20568810 - MGP_129S1SvImJ_P0088356 Ikbkb protein_coding protein_coding MGP_129S1SvImJ_T0088357.1 MGP_129S1SvImJ_G0033457.1 mouse_genomes_project 8 20519396 20568772 - MGP_129S1SvImJ_P0088357 Ikbkb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088358.1 MGP_129S1SvImJ_G0033457.1 mouse_genomes_project 8 20519396 20568766 - MGP_129S1SvImJ_P0088358 Ikbkb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088359.1 MGP_129S1SvImJ_G0033457.1 mouse_genomes_project 8 20519951 20568821 - MGP_129S1SvImJ_P0088359 Ikbkb protein_coding protein_coding MGP_129S1SvImJ_T0088360.1 MGP_129S1SvImJ_G0033457.1 mouse_genomes_project 8 20520291 20521666 - MGP_129S1SvImJ_P0088360 Ikbkb protein_coding protein_coding MGP_129S1SvImJ_T0088361.1 MGP_129S1SvImJ_G0033457.1 mouse_genomes_project 8 20520540 20568810 - Ikbkb protein_coding retained_intron MGP_129S1SvImJ_T0088362.1 MGP_129S1SvImJ_G0033457.1 mouse_genomes_project 8 20528194 20529210 - Ikbkb protein_coding retained_intron MGP_129S1SvImJ_T0088363.1 MGP_129S1SvImJ_G0033457.1 mouse_genomes_project 8 20536167 20568772 - Ikbkb protein_coding retained_intron MGP_129S1SvImJ_T0088364.1 MGP_129S1SvImJ_G0033457.1 mouse_genomes_project 8 20541397 20568771 - Ikbkb protein_coding retained_intron MGP_129S1SvImJ_T0088365.1 MGP_129S1SvImJ_G0033457.1 mouse_genomes_project 8 20542942 20555439 - MGP_129S1SvImJ_P0088365 Ikbkb protein_coding protein_coding MGP_129S1SvImJ_T0088366.1 MGP_129S1SvImJ_G0033457.1 mouse_genomes_project 8 20550504 20568791 - Ikbkb protein_coding retained_intron MGP_129S1SvImJ_T0088367.1 MGP_129S1SvImJ_G0033457.1 mouse_genomes_project 8 20553213 20568806 - Ikbkb protein_coding retained_intron MGP_129S1SvImJ_T0088368.1 MGP_129S1SvImJ_G0033457.1 mouse_genomes_project 8 20564248 20568795 - Ikbkb protein_coding retained_intron MGP_129S1SvImJ_T0088369.1 MGP_129S1SvImJ_G0033457.1 mouse_genomes_project 8 20564687 20568757 - Ikbkb protein_coding processed_transcript MGP_129S1SvImJ_T0088527.1 MGP_129S1SvImJ_G0033505.1 mouse_genomes_project 8 25420885 25424698 - MGP_129S1SvImJ_P0088527 Adrb3 protein_coding protein_coding MGP_129S1SvImJ_T0088528.1 MGP_129S1SvImJ_G0033505.1 mouse_genomes_project 8 25421110 25423693 - MGP_129S1SvImJ_P0088528 Adrb3 protein_coding protein_coding MGP_129S1SvImJ_T0088529.1 MGP_129S1SvImJ_G0033505.1 mouse_genomes_project 8 25421908 25423604 - MGP_129S1SvImJ_P0088529 Adrb3 protein_coding protein_coding MGP_129S1SvImJ_T0089430.1 MGP_129S1SvImJ_G0033776.1 mouse_genomes_project 8 72698105 72700470 - MGP_129S1SvImJ_P0089430 Gm11034 protein_coding protein_coding MGP_129S1SvImJ_T0088392.1 MGP_129S1SvImJ_G0033463.1 mouse_genomes_project 8 21071573 21110009 - MGP_129S1SvImJ_P0088392 Gpat4 protein_coding protein_coding MGP_129S1SvImJ_T0100103.1 MGP_129S1SvImJ_G0038170.1 mouse_genomes_project 8 10622136 10622239 - Gm25014 snRNA snRNA MGP_129S1SvImJ_T0089955.1 MGP_129S1SvImJ_G0033941.1 mouse_genomes_project 8 94381102 94420718 - MGP_129S1SvImJ_P0089955 Ces1b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089956.1 MGP_129S1SvImJ_G0033941.1 mouse_genomes_project 8 94381107 94406112 - MGP_129S1SvImJ_P0089956 Ces1b protein_coding protein_coding MGP_129S1SvImJ_T0089643.1 MGP_129S1SvImJ_G0033853.1 mouse_genomes_project 8 84938125 84968471 + MGP_129S1SvImJ_P0089643 Rfx1 protein_coding protein_coding MGP_129S1SvImJ_T0088084.1 MGP_129S1SvImJ_G0033348.1 mouse_genomes_project 8 7146994 7178094 + MGP_129S1SvImJ_P0088084 Tnfsf13b protein_coding protein_coding MGP_129S1SvImJ_T0011751.1 MGP_129S1SvImJ_G0009867.1 mouse_genomes_project 8 127129364 127129645 + Gm22314 misc_RNA misc_RNA MGP_129S1SvImJ_T0018480.1 MGP_129S1SvImJ_G0015706.1 mouse_genomes_project 8 9972753 9974054 + 4931415C17Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018481.1 MGP_129S1SvImJ_G0015706.1 mouse_genomes_project 8 9972994 9979779 + 4931415C17Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018507.1 MGP_129S1SvImJ_G0015717.1 mouse_genomes_project 8 77134585 77453587 - processed_transcript processed_transcript MGP_129S1SvImJ_T0018508.1 MGP_129S1SvImJ_G0015717.1 mouse_genomes_project 8 77296343 77453775 - processed_transcript processed_transcript MGP_129S1SvImJ_T0018509.1 MGP_129S1SvImJ_G0015717.1 mouse_genomes_project 8 77390956 77454223 - processed_transcript retained_intron MGP_129S1SvImJ_T0090194.1 MGP_129S1SvImJ_G0034028.1 mouse_genomes_project 8 107425751 107477003 + MGP_129S1SvImJ_P0090194 Cbfb protein_coding protein_coding MGP_129S1SvImJ_T0090195.1 MGP_129S1SvImJ_G0034028.1 mouse_genomes_project 8 107425821 107476995 + MGP_129S1SvImJ_P0090195 Cbfb protein_coding protein_coding MGP_129S1SvImJ_T0090196.1 MGP_129S1SvImJ_G0034028.1 mouse_genomes_project 8 107425821 107476995 + MGP_129S1SvImJ_P0090196 Cbfb protein_coding protein_coding MGP_129S1SvImJ_T0090197.1 MGP_129S1SvImJ_G0034028.1 mouse_genomes_project 8 107428197 107476995 + MGP_129S1SvImJ_P0090197 Cbfb protein_coding protein_coding MGP_129S1SvImJ_T0090198.1 MGP_129S1SvImJ_G0034028.1 mouse_genomes_project 8 107428361 107436642 + Cbfb protein_coding retained_intron MGP_129S1SvImJ_T0090199.1 MGP_129S1SvImJ_G0034028.1 mouse_genomes_project 8 107428744 107453169 + Cbfb protein_coding processed_transcript MGP_129S1SvImJ_T0090200.1 MGP_129S1SvImJ_G0034028.1 mouse_genomes_project 8 107428816 107453149 + Cbfb protein_coding processed_transcript MGP_129S1SvImJ_T0089915.1 MGP_129S1SvImJ_G0033927.1 mouse_genomes_project 8 92034282 92269967 + MGP_129S1SvImJ_P0089915 Chd9 protein_coding protein_coding MGP_129S1SvImJ_T0089917.1 MGP_129S1SvImJ_G0033927.1 mouse_genomes_project 8 92115510 92267431 + MGP_129S1SvImJ_P0089917 Chd9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0090560.1 MGP_129S1SvImJ_G0034157.1 mouse_genomes_project 8 116641266 116801276 - MGP_129S1SvImJ_P0090560 Adamts18 protein_coding protein_coding MGP_129S1SvImJ_T0101773.1 MGP_129S1SvImJ_G0039752.1 mouse_genomes_project 8 72362799 72367586 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101774.1 MGP_129S1SvImJ_G0039752.1 mouse_genomes_project 8 72365937 72366560 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0089780.1 MGP_129S1SvImJ_G0033885.1 mouse_genomes_project 8 85934630 85947994 + MGP_129S1SvImJ_P0089780 Hook2 protein_coding protein_coding MGP_129S1SvImJ_T0009126.1 MGP_129S1SvImJ_G0007341.1 mouse_genomes_project 8 81669918 81675156 - Gm27048 lincRNA lincRNA MGP_129S1SvImJ_T0005388.1 MGP_129S1SvImJ_G0004567.1 mouse_genomes_project 8 69189419 69204789 + Gm15716 antisense antisense MGP_129S1SvImJ_T0087988.1 MGP_129S1SvImJ_G0033313.1 mouse_genomes_project 8 601388 605787 + MGP_129S1SvImJ_P0087988 Retn protein_coding protein_coding MGP_129S1SvImJ_T0087989.1 MGP_129S1SvImJ_G0033313.1 mouse_genomes_project 8 601388 603735 + MGP_129S1SvImJ_P0087989 Retn protein_coding protein_coding MGP_129S1SvImJ_T0002359.1 MGP_129S1SvImJ_G0002269.1 mouse_genomes_project 8 107931394 107933959 + TEC TEC MGP_129S1SvImJ_T0102831.1 MGP_129S1SvImJ_G0040663.1 mouse_genomes_project 8 17011250 17013130 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0009087.1 MGP_129S1SvImJ_G0007308.1 mouse_genomes_project 8 24975202 24987114 - lincRNA lincRNA MGP_129S1SvImJ_T0009124.1 MGP_129S1SvImJ_G0007339.1 mouse_genomes_project 8 78213549 78220390 + 1700092C02Rik lincRNA lincRNA MGP_129S1SvImJ_T0089537.1 MGP_129S1SvImJ_G0033815.1 mouse_genomes_project 8 80401191 80472681 + MGP_129S1SvImJ_P0089537 Anapc10 protein_coding protein_coding MGP_129S1SvImJ_T0098396.1 MGP_129S1SvImJ_G0036481.1 mouse_genomes_project 8 105844992 105848547 - pseudogene pseudogene MGP_129S1SvImJ_T0088199.1 MGP_129S1SvImJ_G0033379.1 mouse_genomes_project 8 10737213 10746155 - MGP_129S1SvImJ_P0088199 Atp4b protein_coding protein_coding MGP_129S1SvImJ_T0088532.1 MGP_129S1SvImJ_G0033508.1 mouse_genomes_project 8 25580784 25611123 + MGP_129S1SvImJ_P0088532 Chrnb3 protein_coding protein_coding MGP_129S1SvImJ_T0090295.1 MGP_129S1SvImJ_G0034067.1 mouse_genomes_project 8 108255737 108257606 - MGP_129S1SvImJ_P0090295 Ctrl protein_coding protein_coding MGP_129S1SvImJ_T0089526.1 MGP_129S1SvImJ_G0033811.1 mouse_genomes_project 8 79931141 79947989 - MGP_129S1SvImJ_P0089526 Mmaa protein_coding unknown_likely_coding MGP_129S1SvImJ_T0090937.1 MGP_129S1SvImJ_G0034263.1 mouse_genomes_project 8 127490675 127491118 + MGP_129S1SvImJ_P0090937 protein_coding protein_coding MGP_129S1SvImJ_T0090975.1 MGP_129S1SvImJ_G0034277.1 mouse_genomes_project 8 128444223 128455719 - MGP_129S1SvImJ_P0090975 Fam89a protein_coding protein_coding MGP_129S1SvImJ_T0088875.1 MGP_129S1SvImJ_G0033615.1 mouse_genomes_project 8 54610897 54732385 + MGP_129S1SvImJ_P0088875 Gpm6a protein_coding protein_coding MGP_129S1SvImJ_T0090165.1 MGP_129S1SvImJ_G0034013.1 mouse_genomes_project 8 106683285 106692773 + MGP_129S1SvImJ_P0090165 Car7 protein_coding protein_coding MGP_129S1SvImJ_T0090166.1 MGP_129S1SvImJ_G0034013.1 mouse_genomes_project 8 106690305 106691489 + Car7 protein_coding retained_intron MGP_129S1SvImJ_T0015960.1 MGP_129S1SvImJ_G0014049.1 mouse_genomes_project 8 16749954 16750792 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0090090.1 MGP_129S1SvImJ_G0033984.1 mouse_genomes_project 8 96814096 96825792 + Usb1 protein_coding retained_intron MGP_129S1SvImJ_T0090091.1 MGP_129S1SvImJ_G0033984.1 mouse_genomes_project 8 96814133 96829034 + MGP_129S1SvImJ_P0090091 Usb1 protein_coding protein_coding MGP_129S1SvImJ_T0090092.1 MGP_129S1SvImJ_G0033984.1 mouse_genomes_project 8 96826671 96828351 + Usb1 protein_coding retained_intron MGP_129S1SvImJ_T0090979.1 MGP_129S1SvImJ_G0034280.1 mouse_genomes_project 8 128572649 128604583 + MGP_129S1SvImJ_P0090979 Gnpat protein_coding protein_coding MGP_129S1SvImJ_T0090980.1 MGP_129S1SvImJ_G0034280.1 mouse_genomes_project 8 128572688 128601254 + MGP_129S1SvImJ_P0090980 Gnpat protein_coding protein_coding MGP_129S1SvImJ_T0090981.1 MGP_129S1SvImJ_G0034280.1 mouse_genomes_project 8 128597971 128601575 + Gnpat protein_coding retained_intron MGP_129S1SvImJ_T0090982.1 MGP_129S1SvImJ_G0034280.1 mouse_genomes_project 8 128598040 128604074 + Gnpat protein_coding retained_intron MGP_129S1SvImJ_T0090983.1 MGP_129S1SvImJ_G0034280.1 mouse_genomes_project 8 128600022 128601433 + Gnpat protein_coding retained_intron MGP_129S1SvImJ_T0090984.1 MGP_129S1SvImJ_G0034280.1 mouse_genomes_project 8 128602154 128604144 + Gnpat protein_coding retained_intron MGP_129S1SvImJ_T0090224.1 MGP_129S1SvImJ_G0034036.1 mouse_genomes_project 8 107555142 107561317 - MGP_129S1SvImJ_P0090224 Exoc3l protein_coding protein_coding MGP_129S1SvImJ_T0090633.1 MGP_129S1SvImJ_G0034184.1 mouse_genomes_project 8 122835155 122889010 - MGP_129S1SvImJ_P0090633 Mbtps1 protein_coding protein_coding MGP_129S1SvImJ_T0090634.1 MGP_129S1SvImJ_G0034184.1 mouse_genomes_project 8 122835155 122889010 - MGP_129S1SvImJ_P0090634 Mbtps1 protein_coding protein_coding MGP_129S1SvImJ_T0089109.1 MGP_129S1SvImJ_G0033687.1 mouse_genomes_project 8 70320243 70327345 + MGP_129S1SvImJ_P0089109 Tm6sf2 protein_coding protein_coding MGP_129S1SvImJ_T0089110.1 MGP_129S1SvImJ_G0033687.1 mouse_genomes_project 8 70320251 70327331 + MGP_129S1SvImJ_P0089110 Tm6sf2 protein_coding protein_coding MGP_129S1SvImJ_T0089111.1 MGP_129S1SvImJ_G0033687.1 mouse_genomes_project 8 70321603 70322993 + Tm6sf2 protein_coding retained_intron MGP_129S1SvImJ_T0089112.1 MGP_129S1SvImJ_G0033687.1 mouse_genomes_project 8 70322707 70325408 + Tm6sf2 protein_coding retained_intron MGP_129S1SvImJ_T0089113.1 MGP_129S1SvImJ_G0033687.1 mouse_genomes_project 8 70324685 70325899 + Tm6sf2 protein_coding retained_intron MGP_129S1SvImJ_T0091060.1 MGP_129S1SvImJ_G0034304.1 mouse_genomes_project 8 132949474 133041026 - MGP_129S1SvImJ_P0091060 Ccdc7a protein_coding protein_coding MGP_129S1SvImJ_T0091061.1 MGP_129S1SvImJ_G0034304.1 mouse_genomes_project 8 132949572 133040997 - MGP_129S1SvImJ_P0091061 Ccdc7a protein_coding protein_coding MGP_129S1SvImJ_T0091063.1 MGP_129S1SvImJ_G0034304.1 mouse_genomes_project 8 133012602 133041001 - MGP_129S1SvImJ_P0091063 Ccdc7a protein_coding protein_coding MGP_129S1SvImJ_T0016015.1 MGP_129S1SvImJ_G0014104.1 mouse_genomes_project 8 107959768 107960209 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0088371.1 MGP_129S1SvImJ_G0033459.1 mouse_genomes_project 8 20654082 20677810 - MGP_129S1SvImJ_P0088371 Ap3m2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0098644.1 MGP_129S1SvImJ_G0036729.1 mouse_genomes_project 8 2067406 2067525 - n-R5s93 rRNA rRNA MGP_129S1SvImJ_T0091056.1 MGP_129S1SvImJ_G0034302.1 mouse_genomes_project 8 132714485 132766536 - MGP_129S1SvImJ_P0091056 Gm3952 protein_coding protein_coding MGP_129S1SvImJ_T0009122.1 MGP_129S1SvImJ_G0007338.1 mouse_genomes_project 8 75054853 75267078 - lincRNA lincRNA MGP_129S1SvImJ_T0009123.1 MGP_129S1SvImJ_G0007338.1 mouse_genomes_project 8 75258598 75267051 - lincRNA lincRNA MGP_129S1SvImJ_T0090028.1 MGP_129S1SvImJ_G0033964.1 mouse_genomes_project 8 96034552 96090744 + MGP_129S1SvImJ_P0090028 Rspry1 protein_coding protein_coding MGP_129S1SvImJ_T0090029.1 MGP_129S1SvImJ_G0033964.1 mouse_genomes_project 8 96034575 96054808 + MGP_129S1SvImJ_P0090029 Rspry1 protein_coding protein_coding MGP_129S1SvImJ_T0090030.1 MGP_129S1SvImJ_G0033964.1 mouse_genomes_project 8 96057933 96061486 + Rspry1 protein_coding retained_intron MGP_129S1SvImJ_T0088564.1 MGP_129S1SvImJ_G0033525.1 mouse_genomes_project 8 32076614 32102405 - MGP_129S1SvImJ_P0088564 Ubxn8 protein_coding protein_coding MGP_129S1SvImJ_T0087999.1 MGP_129S1SvImJ_G0033321.1 mouse_genomes_project 8 889133 898349 - MGP_129S1SvImJ_P0087999 Cd209b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088000.1 MGP_129S1SvImJ_G0033321.1 mouse_genomes_project 8 889135 898338 - MGP_129S1SvImJ_P0088000 Cd209b protein_coding protein_coding MGP_129S1SvImJ_T0088001.1 MGP_129S1SvImJ_G0033321.1 mouse_genomes_project 8 890084 898338 - MGP_129S1SvImJ_P0088001 Cd209b protein_coding protein_coding MGP_129S1SvImJ_T0088002.1 MGP_129S1SvImJ_G0033321.1 mouse_genomes_project 8 890155 898318 - MGP_129S1SvImJ_P0088002 Cd209b protein_coding protein_coding MGP_129S1SvImJ_T0088290.1 MGP_129S1SvImJ_G0033407.1 mouse_genomes_project 8 16459375 16462690 - MGP_129S1SvImJ_P0088290 Defb40 protein_coding protein_coding MGP_129S1SvImJ_T0016007.1 MGP_129S1SvImJ_G0014096.1 mouse_genomes_project 8 90265332 90265657 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0088546.1 MGP_129S1SvImJ_G0033515.1 mouse_genomes_project 8 29548147 29557219 - MGP_129S1SvImJ_P0088546 Mak16 protein_coding protein_coding MGP_129S1SvImJ_T0088403.1 MGP_129S1SvImJ_G0033468.1 mouse_genomes_project 8 22143114 22155039 + MGP_129S1SvImJ_P0088403 protein_coding protein_coding MGP_129S1SvImJ_T0089948.1 MGP_129S1SvImJ_G0033937.1 mouse_genomes_project 8 94172142 94237940 + MGP_129S1SvImJ_P0089948 Lpcat2 protein_coding protein_coding MGP_129S1SvImJ_T0089949.1 MGP_129S1SvImJ_G0033937.1 mouse_genomes_project 8 94172272 94186497 + Lpcat2 protein_coding processed_transcript MGP_129S1SvImJ_T0089951.1 MGP_129S1SvImJ_G0033937.1 mouse_genomes_project 8 94224875 94236701 + Lpcat2 protein_coding processed_transcript MGP_129S1SvImJ_T0090051.1 MGP_129S1SvImJ_G0033971.1 mouse_genomes_project 8 96278129 96295707 + MGP_129S1SvImJ_P0090051 Coq9 protein_coding protein_coding MGP_129S1SvImJ_T0090052.1 MGP_129S1SvImJ_G0033971.1 mouse_genomes_project 8 96278213 96291594 + Coq9 protein_coding retained_intron MGP_129S1SvImJ_T0090053.1 MGP_129S1SvImJ_G0033971.1 mouse_genomes_project 8 96278223 96282570 + Coq9 protein_coding retained_intron MGP_129S1SvImJ_T0090054.1 MGP_129S1SvImJ_G0033971.1 mouse_genomes_project 8 96278237 96294007 + Coq9 protein_coding retained_intron MGP_129S1SvImJ_T0090055.1 MGP_129S1SvImJ_G0033971.1 mouse_genomes_project 8 96278237 96294082 + MGP_129S1SvImJ_P0090055 Coq9 protein_coding protein_coding MGP_129S1SvImJ_T0090056.1 MGP_129S1SvImJ_G0033971.1 mouse_genomes_project 8 96291000 96291794 + Coq9 protein_coding retained_intron MGP_129S1SvImJ_T0090057.1 MGP_129S1SvImJ_G0033971.1 mouse_genomes_project 8 96294326 96295149 + Coq9 protein_coding retained_intron MGP_129S1SvImJ_T0090188.1 MGP_129S1SvImJ_G0034025.1 mouse_genomes_project 8 107236748 107246529 + MGP_129S1SvImJ_P0090188 Ces3a protein_coding protein_coding MGP_129S1SvImJ_T0090280.1 MGP_129S1SvImJ_G0034059.1 mouse_genomes_project 8 108081087 108141821 - MGP_129S1SvImJ_P0090280 Ranbp10 protein_coding protein_coding MGP_129S1SvImJ_T0009073.1 MGP_129S1SvImJ_G0007298.1 mouse_genomes_project 8 8111383 8115414 - 3930402G23Rik lincRNA lincRNA MGP_129S1SvImJ_T0090592.1 MGP_129S1SvImJ_G0034168.1 mouse_genomes_project 8 120090108 120099455 - MGP_129S1SvImJ_P0090592 1700030J22Rik protein_coding protein_coding MGP_129S1SvImJ_T0089916.1 MGP_129S1SvImJ_G0033928.1 mouse_genomes_project 8 92114384 92114861 - MGP_129S1SvImJ_P0089916 protein_coding protein_coding MGP_129S1SvImJ_T0089061.1 MGP_129S1SvImJ_G0033670.1 mouse_genomes_project 8 69827184 69841541 - MGP_129S1SvImJ_P0089061 Zfp868 protein_coding protein_coding MGP_129S1SvImJ_T0089062.1 MGP_129S1SvImJ_G0033670.1 mouse_genomes_project 8 69827741 69835700 - MGP_129S1SvImJ_P0089062 Zfp868 protein_coding protein_coding MGP_129S1SvImJ_T0089063.1 MGP_129S1SvImJ_G0033670.1 mouse_genomes_project 8 69828747 69830387 - Zfp868 protein_coding retained_intron MGP_129S1SvImJ_T0089064.1 MGP_129S1SvImJ_G0033670.1 mouse_genomes_project 8 69835213 69841538 - Zfp868 protein_coding retained_intron MGP_129S1SvImJ_T0088299.1 MGP_129S1SvImJ_G0033415.1 mouse_genomes_project 8 16671137 16671993 + MGP_129S1SvImJ_P0088299 Defb14 protein_coding protein_coding MGP_129S1SvImJ_T0018488.1 MGP_129S1SvImJ_G0015711.1 mouse_genomes_project 8 40053968 40056672 + Gm16348 processed_transcript processed_transcript MGP_129S1SvImJ_T0018489.1 MGP_129S1SvImJ_G0015711.1 mouse_genomes_project 8 40053969 40056304 + Gm16348 processed_transcript processed_transcript MGP_129S1SvImJ_T0089125.1 MGP_129S1SvImJ_G0033693.1 mouse_genomes_project 8 70402966 70420687 + MGP_129S1SvImJ_P0089125 protein_coding protein_coding MGP_129S1SvImJ_T0089126.1 MGP_129S1SvImJ_G0033693.1 mouse_genomes_project 8 70402966 70420687 + MGP_129S1SvImJ_P0089126 protein_coding protein_coding MGP_129S1SvImJ_T0089127.1 MGP_129S1SvImJ_G0033693.1 mouse_genomes_project 8 70402969 70420686 + MGP_129S1SvImJ_P0089127 protein_coding protein_coding MGP_129S1SvImJ_T0089128.1 MGP_129S1SvImJ_G0033693.1 mouse_genomes_project 8 70402969 70420686 + MGP_129S1SvImJ_P0089128 protein_coding protein_coding MGP_129S1SvImJ_T0089351.1 MGP_129S1SvImJ_G0033754.1 mouse_genomes_project 8 71973573 71979418 - MGP_129S1SvImJ_P0089351 Nxnl1 protein_coding protein_coding MGP_129S1SvImJ_T0089352.1 MGP_129S1SvImJ_G0033754.1 mouse_genomes_project 8 71973573 71979466 - MGP_129S1SvImJ_P0089352 Nxnl1 protein_coding protein_coding MGP_129S1SvImJ_T0011735.1 MGP_129S1SvImJ_G0009851.1 mouse_genomes_project 8 24346910 24347169 - Gm22227 misc_RNA misc_RNA MGP_129S1SvImJ_T0100122.1 MGP_129S1SvImJ_G0038189.1 mouse_genomes_project 8 67293408 67293532 - Gm24274 snRNA snRNA MGP_129S1SvImJ_T0088404.1 MGP_129S1SvImJ_G0033469.1 mouse_genomes_project 8 22423467 22425272 - MGP_129S1SvImJ_P0088404 1810011O10Rik protein_coding protein_coding MGP_129S1SvImJ_T0015968.1 MGP_129S1SvImJ_G0014057.1 mouse_genomes_project 8 20076105 20076396 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0089631.1 MGP_129S1SvImJ_G0033847.1 mouse_genomes_project 8 84873573 84875510 - MGP_129S1SvImJ_P0089631 2210011C24Rik protein_coding protein_coding MGP_129S1SvImJ_T0089632.1 MGP_129S1SvImJ_G0033847.1 mouse_genomes_project 8 84873590 84874763 - MGP_129S1SvImJ_P0089632 2210011C24Rik protein_coding protein_coding MGP_129S1SvImJ_T0089633.1 MGP_129S1SvImJ_G0033847.1 mouse_genomes_project 8 84874118 84874763 - MGP_129S1SvImJ_P0089633 2210011C24Rik protein_coding protein_coding MGP_129S1SvImJ_T0089634.1 MGP_129S1SvImJ_G0033847.1 mouse_genomes_project 8 84874795 84875523 - MGP_129S1SvImJ_P0089634 2210011C24Rik protein_coding protein_coding MGP_129S1SvImJ_T0089635.1 MGP_129S1SvImJ_G0033847.1 mouse_genomes_project 8 84874803 84875508 - MGP_129S1SvImJ_P0089635 2210011C24Rik protein_coding protein_coding MGP_129S1SvImJ_T0089894.1 MGP_129S1SvImJ_G0033919.1 mouse_genomes_project 8 89410203 89412098 - Brd7 protein_coding processed_transcript MGP_129S1SvImJ_T0089895.1 MGP_129S1SvImJ_G0033919.1 mouse_genomes_project 8 89410214 89441181 - MGP_129S1SvImJ_P0089895 Brd7 protein_coding protein_coding MGP_129S1SvImJ_T0089896.1 MGP_129S1SvImJ_G0033919.1 mouse_genomes_project 8 89411965 89413099 - Brd7 protein_coding processed_transcript MGP_129S1SvImJ_T0089897.1 MGP_129S1SvImJ_G0033919.1 mouse_genomes_project 8 89411984 89414663 - Brd7 protein_coding retained_intron MGP_129S1SvImJ_T0089898.1 MGP_129S1SvImJ_G0033919.1 mouse_genomes_project 8 89412064 89422000 - Brd7 protein_coding processed_transcript MGP_129S1SvImJ_T0089899.1 MGP_129S1SvImJ_G0033919.1 mouse_genomes_project 8 89412726 89421922 - Brd7 protein_coding processed_transcript MGP_129S1SvImJ_T0089900.1 MGP_129S1SvImJ_G0033919.1 mouse_genomes_project 8 89436531 89441004 - Brd7 protein_coding processed_transcript MGP_129S1SvImJ_T0002360.1 MGP_129S1SvImJ_G0002270.1 mouse_genomes_project 8 109539360 109540143 + TEC TEC MGP_129S1SvImJ_T0100120.1 MGP_129S1SvImJ_G0038187.1 mouse_genomes_project 8 65690109 65690216 - Gm23515 snRNA snRNA MGP_129S1SvImJ_T0011039.1 MGP_129S1SvImJ_G0009155.1 mouse_genomes_project 8 114231440 114231563 + Mir1957b miRNA miRNA MGP_129S1SvImJ_T0088340.1 MGP_129S1SvImJ_G0033446.1 mouse_genomes_project 8 20011934 20030363 - MGP_129S1SvImJ_P0088340 Ckap2 protein_coding protein_coding MGP_129S1SvImJ_T0099009.1 MGP_129S1SvImJ_G0037082.1 mouse_genomes_project 8 32359638 32360606 - Gm26978 sense_intronic sense_intronic MGP_129S1SvImJ_T0009100.1 MGP_129S1SvImJ_G0007317.1 mouse_genomes_project 8 32594792 32596382 + Gm26768 lincRNA lincRNA MGP_129S1SvImJ_T0088719.1 MGP_129S1SvImJ_G0033576.1 mouse_genomes_project 8 44444712 44459465 - MGP_129S1SvImJ_P0088719 Tlr3 protein_coding protein_coding MGP_129S1SvImJ_T0088720.1 MGP_129S1SvImJ_G0033576.1 mouse_genomes_project 8 44444958 44459534 - MGP_129S1SvImJ_P0088720 Tlr3 protein_coding protein_coding MGP_129S1SvImJ_T0005361.1 MGP_129S1SvImJ_G0004545.1 mouse_genomes_project 8 20547638 20557020 + Gm15346 antisense antisense MGP_129S1SvImJ_T0090136.1 MGP_129S1SvImJ_G0034002.1 mouse_genomes_project 8 106340351 106362549 - MGP_129S1SvImJ_P0090136 Tk2 protein_coding protein_coding MGP_129S1SvImJ_T0089710.1 MGP_129S1SvImJ_G0033867.1 mouse_genomes_project 8 85612652 85620933 - Nfix protein_coding processed_transcript MGP_129S1SvImJ_T0089712.1 MGP_129S1SvImJ_G0033867.1 mouse_genomes_project 8 85617485 85620431 - Nfix protein_coding processed_transcript MGP_129S1SvImJ_T0089713.1 MGP_129S1SvImJ_G0033867.1 mouse_genomes_project 8 85617486 85686889 - MGP_129S1SvImJ_P0089713 Nfix protein_coding protein_coding MGP_129S1SvImJ_T0089714.1 MGP_129S1SvImJ_G0033867.1 mouse_genomes_project 8 85621328 85715430 - MGP_129S1SvImJ_P0089714 Nfix protein_coding protein_coding MGP_129S1SvImJ_T0089715.1 MGP_129S1SvImJ_G0033867.1 mouse_genomes_project 8 85621349 85626779 - Nfix protein_coding retained_intron MGP_129S1SvImJ_T0089716.1 MGP_129S1SvImJ_G0033867.1 mouse_genomes_project 8 85626505 85715430 - MGP_129S1SvImJ_P0089716 Nfix protein_coding protein_coding MGP_129S1SvImJ_T0090094.1 MGP_129S1SvImJ_G0033986.1 mouse_genomes_project 8 96896152 96914309 - MGP_129S1SvImJ_P0090094 Cfap20 protein_coding protein_coding MGP_129S1SvImJ_T0015959.1 MGP_129S1SvImJ_G0014048.1 mouse_genomes_project 8 16527247 16533004 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100118.1 MGP_129S1SvImJ_G0038185.1 mouse_genomes_project 8 59416670 59416778 + Gm24847 snRNA snRNA MGP_129S1SvImJ_T0088788.1 MGP_129S1SvImJ_G0033588.1 mouse_genomes_project 8 45575161 45639653 + MGP_129S1SvImJ_P0088788 Acsl1 protein_coding protein_coding MGP_129S1SvImJ_T0088789.1 MGP_129S1SvImJ_G0033588.1 mouse_genomes_project 8 45575219 45620426 + Acsl1 protein_coding retained_intron MGP_129S1SvImJ_T0088790.1 MGP_129S1SvImJ_G0033588.1 mouse_genomes_project 8 45575303 45614920 + MGP_129S1SvImJ_P0088790 Acsl1 protein_coding protein_coding MGP_129S1SvImJ_T0088791.1 MGP_129S1SvImJ_G0033588.1 mouse_genomes_project 8 45594106 45639183 + MGP_129S1SvImJ_P0088791 Acsl1 protein_coding protein_coding MGP_129S1SvImJ_T0088792.1 MGP_129S1SvImJ_G0033588.1 mouse_genomes_project 8 45594106 45609162 + MGP_129S1SvImJ_P0088792 Acsl1 protein_coding protein_coding MGP_129S1SvImJ_T0088793.1 MGP_129S1SvImJ_G0033588.1 mouse_genomes_project 8 45595967 45638082 + MGP_129S1SvImJ_P0088793 Acsl1 protein_coding protein_coding MGP_129S1SvImJ_T0088794.1 MGP_129S1SvImJ_G0033588.1 mouse_genomes_project 8 45630365 45632244 + Acsl1 protein_coding retained_intron MGP_129S1SvImJ_T0088795.1 MGP_129S1SvImJ_G0033588.1 mouse_genomes_project 8 45634655 45638057 + MGP_129S1SvImJ_P0088795 Acsl1 protein_coding protein_coding MGP_129S1SvImJ_T0088080.1 MGP_129S1SvImJ_G0033345.1 mouse_genomes_project 8 6995987 7002003 + MGP_129S1SvImJ_P0088080 Gm10217 protein_coding protein_coding MGP_129S1SvImJ_T0088326.1 MGP_129S1SvImJ_G0033441.1 mouse_genomes_project 8 19806023 19811541 + MGP_129S1SvImJ_P0088326 Ccdc70 protein_coding protein_coding MGP_129S1SvImJ_T0088327.1 MGP_129S1SvImJ_G0033441.1 mouse_genomes_project 8 19806851 19811565 + MGP_129S1SvImJ_P0088327 Ccdc70 protein_coding protein_coding MGP_129S1SvImJ_T0100149.1 MGP_129S1SvImJ_G0038216.1 mouse_genomes_project 8 130916281 130916452 + Gm22730 snRNA snRNA MGP_129S1SvImJ_T0089268.1 MGP_129S1SvImJ_G0033727.1 mouse_genomes_project 8 71081216 71095536 - MGP_129S1SvImJ_P0089268 Mast3 protein_coding protein_coding MGP_129S1SvImJ_T0090913.1 MGP_129S1SvImJ_G0034256.1 mouse_genomes_project 8 127051597 127074967 + MGP_129S1SvImJ_P0090913 Def8 protein_coding protein_coding MGP_129S1SvImJ_T0090914.1 MGP_129S1SvImJ_G0034256.1 mouse_genomes_project 8 127051597 127070937 + MGP_129S1SvImJ_P0090914 Def8 protein_coding protein_coding MGP_129S1SvImJ_T0090915.1 MGP_129S1SvImJ_G0034256.1 mouse_genomes_project 8 127051597 127074967 + MGP_129S1SvImJ_P0090915 Def8 protein_coding protein_coding MGP_129S1SvImJ_T0090916.1 MGP_129S1SvImJ_G0034256.1 mouse_genomes_project 8 127051607 127063290 + MGP_129S1SvImJ_P0090916 Def8 protein_coding protein_coding MGP_129S1SvImJ_T0090917.1 MGP_129S1SvImJ_G0034256.1 mouse_genomes_project 8 127051616 127074967 + MGP_129S1SvImJ_P0090917 Def8 protein_coding protein_coding MGP_129S1SvImJ_T0090918.1 MGP_129S1SvImJ_G0034256.1 mouse_genomes_project 8 127051619 127063226 + MGP_129S1SvImJ_P0090918 Def8 protein_coding protein_coding MGP_129S1SvImJ_T0090919.1 MGP_129S1SvImJ_G0034256.1 mouse_genomes_project 8 127051623 127065948 + MGP_129S1SvImJ_P0090919 Def8 protein_coding protein_coding MGP_129S1SvImJ_T0090920.1 MGP_129S1SvImJ_G0034256.1 mouse_genomes_project 8 127051919 127074959 + MGP_129S1SvImJ_P0090920 Def8 protein_coding protein_coding MGP_129S1SvImJ_T0101372.1 MGP_129S1SvImJ_G0039439.1 mouse_genomes_project 8 22682412 22682536 + Gm26208 snoRNA snoRNA MGP_129S1SvImJ_T0015984.1 MGP_129S1SvImJ_G0014073.1 mouse_genomes_project 8 58506471 58507413 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005416.1 MGP_129S1SvImJ_G0004591.1 mouse_genomes_project 8 120160763 120167906 + Gm15395 antisense antisense MGP_129S1SvImJ_T0005408.1 MGP_129S1SvImJ_G0004583.1 mouse_genomes_project 8 113440190 113443946 + Gm15894 antisense antisense MGP_129S1SvImJ_T0098400.1 MGP_129S1SvImJ_G0036485.1 mouse_genomes_project 8 125980816 125982802 + pseudogene pseudogene MGP_129S1SvImJ_T0088898.1 MGP_129S1SvImJ_G0033626.1 mouse_genomes_project 8 57522631 57741516 - MGP_129S1SvImJ_P0088898 Galntl6 protein_coding protein_coding MGP_129S1SvImJ_T0088899.1 MGP_129S1SvImJ_G0033626.1 mouse_genomes_project 8 57522639 58738770 - MGP_129S1SvImJ_P0088899 Galntl6 protein_coding protein_coding MGP_129S1SvImJ_T0088900.1 MGP_129S1SvImJ_G0033626.1 mouse_genomes_project 8 57524799 57741594 - MGP_129S1SvImJ_P0088900 Galntl6 protein_coding protein_coding MGP_129S1SvImJ_T0088901.1 MGP_129S1SvImJ_G0033626.1 mouse_genomes_project 8 57544521 57601833 - Galntl6 protein_coding processed_transcript MGP_129S1SvImJ_T0088902.1 MGP_129S1SvImJ_G0033626.1 mouse_genomes_project 8 58205546 58737757 - Galntl6 protein_coding retained_intron MGP_129S1SvImJ_T0088903.1 MGP_129S1SvImJ_G0033626.1 mouse_genomes_project 8 58205632 58737706 - MGP_129S1SvImJ_P0088903 Galntl6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088904.1 MGP_129S1SvImJ_G0033626.1 mouse_genomes_project 8 58205752 58507670 - MGP_129S1SvImJ_P0088904 Galntl6 protein_coding protein_coding MGP_129S1SvImJ_T0088905.1 MGP_129S1SvImJ_G0033626.1 mouse_genomes_project 8 58282412 58507692 - Galntl6 protein_coding processed_transcript MGP_129S1SvImJ_T0088906.1 MGP_129S1SvImJ_G0033626.1 mouse_genomes_project 8 58318054 58737990 - MGP_129S1SvImJ_P0088906 Galntl6 protein_coding protein_coding MGP_129S1SvImJ_T0090829.1 MGP_129S1SvImJ_G0034232.1 mouse_genomes_project 8 126130948 126172151 - MGP_129S1SvImJ_P0090829 Galns protein_coding protein_coding MGP_129S1SvImJ_T0098652.1 MGP_129S1SvImJ_G0036737.1 mouse_genomes_project 8 54523874 54523993 + n-R5s98 rRNA rRNA MGP_129S1SvImJ_T0089975.1 MGP_129S1SvImJ_G0033947.1 mouse_genomes_project 8 94723831 94735569 - MGP_129S1SvImJ_P0089975 Ces1h protein_coding protein_coding MGP_129S1SvImJ_T0002365.1 MGP_129S1SvImJ_G0002275.1 mouse_genomes_project 8 124126891 124127758 + TEC TEC MGP_129S1SvImJ_T0090646.1 MGP_129S1SvImJ_G0034190.1 mouse_genomes_project 8 123009332 123032081 + MGP_129S1SvImJ_P0090646 Wfdc1 protein_coding protein_coding MGP_129S1SvImJ_T0018491.1 MGP_129S1SvImJ_G0015713.1 mouse_genomes_project 8 44778065 44793659 + processed_transcript processed_transcript MGP_129S1SvImJ_T0101418.1 MGP_129S1SvImJ_G0039485.1 mouse_genomes_project 8 116452967 116453098 - Gm25766 snoRNA snoRNA MGP_129S1SvImJ_T0088094.1 MGP_129S1SvImJ_G0033354.1 mouse_genomes_project 8 8709278 8725016 + MGP_129S1SvImJ_P0088094 Carkd protein_coding protein_coding MGP_129S1SvImJ_T0088095.1 MGP_129S1SvImJ_G0033354.1 mouse_genomes_project 8 8709339 8726765 + MGP_129S1SvImJ_P0088095 Carkd protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088096.1 MGP_129S1SvImJ_G0033354.1 mouse_genomes_project 8 8709340 8725016 + MGP_129S1SvImJ_P0088096 Carkd protein_coding protein_coding MGP_129S1SvImJ_T0088097.1 MGP_129S1SvImJ_G0033354.1 mouse_genomes_project 8 8709365 8718847 + Carkd protein_coding retained_intron MGP_129S1SvImJ_T0088098.1 MGP_129S1SvImJ_G0033354.1 mouse_genomes_project 8 8709405 8721967 + Carkd protein_coding retained_intron MGP_129S1SvImJ_T0088099.1 MGP_129S1SvImJ_G0033354.1 mouse_genomes_project 8 8709425 8724774 + MGP_129S1SvImJ_P0088099 Carkd protein_coding protein_coding MGP_129S1SvImJ_T0088100.1 MGP_129S1SvImJ_G0033354.1 mouse_genomes_project 8 8721692 8724996 + Carkd protein_coding retained_intron MGP_129S1SvImJ_T0090620.1 MGP_129S1SvImJ_G0034181.1 mouse_genomes_project 8 122745623 122754580 + MGP_129S1SvImJ_P0090620 Osgin1 protein_coding protein_coding MGP_129S1SvImJ_T0090621.1 MGP_129S1SvImJ_G0034181.1 mouse_genomes_project 8 122748621 122754519 + Osgin1 protein_coding processed_transcript MGP_129S1SvImJ_T0090622.1 MGP_129S1SvImJ_G0034181.1 mouse_genomes_project 8 122748652 122757765 + MGP_129S1SvImJ_P0090622 Osgin1 protein_coding protein_coding MGP_129S1SvImJ_T0090623.1 MGP_129S1SvImJ_G0034181.1 mouse_genomes_project 8 122748666 122757759 + Osgin1 protein_coding retained_intron MGP_129S1SvImJ_T0090624.1 MGP_129S1SvImJ_G0034181.1 mouse_genomes_project 8 122748688 122756560 + Osgin1 protein_coding retained_intron MGP_129S1SvImJ_T0090257.1 MGP_129S1SvImJ_G0034049.1 mouse_genomes_project 8 107811847 107858186 - MGP_129S1SvImJ_P0090257 Atp6v0d1 protein_coding protein_coding MGP_129S1SvImJ_T0090258.1 MGP_129S1SvImJ_G0034049.1 mouse_genomes_project 8 107818033 107828841 - Atp6v0d1 protein_coding retained_intron MGP_129S1SvImJ_T0100111.1 MGP_129S1SvImJ_G0038178.1 mouse_genomes_project 8 41661467 41661573 + Gm26181 snRNA snRNA MGP_129S1SvImJ_T0090739.1 MGP_129S1SvImJ_G0034212.1 mouse_genomes_project 8 125065956 125096005 - MGP_129S1SvImJ_P0090739 Fbxo31 protein_coding protein_coding MGP_129S1SvImJ_T0090740.1 MGP_129S1SvImJ_G0034212.1 mouse_genomes_project 8 125070990 125075802 - Fbxo31 protein_coding processed_transcript MGP_129S1SvImJ_T0090741.1 MGP_129S1SvImJ_G0034212.1 mouse_genomes_project 8 125072614 125076666 - Fbxo31 protein_coding retained_intron MGP_129S1SvImJ_T0090742.1 MGP_129S1SvImJ_G0034212.1 mouse_genomes_project 8 125081033 125095989 - MGP_129S1SvImJ_P0090742 Fbxo31 protein_coding protein_coding MGP_129S1SvImJ_T0101371.1 MGP_129S1SvImJ_G0039438.1 mouse_genomes_project 8 21204367 21204499 - Gm24335 snoRNA snoRNA MGP_129S1SvImJ_T0089763.1 MGP_129S1SvImJ_G0033881.1 mouse_genomes_project 8 85889064 85899547 + MGP_129S1SvImJ_P0089763 Rtbdn protein_coding protein_coding MGP_129S1SvImJ_T0089764.1 MGP_129S1SvImJ_G0033881.1 mouse_genomes_project 8 85889064 85899547 + MGP_129S1SvImJ_P0089764 Rtbdn protein_coding protein_coding MGP_129S1SvImJ_T0089765.1 MGP_129S1SvImJ_G0033881.1 mouse_genomes_project 8 85891784 85899547 + MGP_129S1SvImJ_P0089765 Rtbdn protein_coding protein_coding MGP_129S1SvImJ_T0089766.1 MGP_129S1SvImJ_G0033881.1 mouse_genomes_project 8 85893098 85899455 + MGP_129S1SvImJ_P0089766 Rtbdn protein_coding protein_coding MGP_129S1SvImJ_T0011045.1 MGP_129S1SvImJ_G0009161.1 mouse_genomes_project 8 123969065 123969124 + Mir7687 miRNA miRNA MGP_129S1SvImJ_T0088879.1 MGP_129S1SvImJ_G0033618.1 mouse_genomes_project 8 55983753 56010982 + MGP_129S1SvImJ_P0088879 Hpgd protein_coding protein_coding MGP_129S1SvImJ_T0089646.1 MGP_129S1SvImJ_G0033855.1 mouse_genomes_project 8 84996617 85003112 + MGP_129S1SvImJ_P0089646 Podnl1 protein_coding protein_coding MGP_129S1SvImJ_T0089647.1 MGP_129S1SvImJ_G0033855.1 mouse_genomes_project 8 84998447 85003101 + Podnl1 protein_coding retained_intron MGP_129S1SvImJ_T0011040.1 MGP_129S1SvImJ_G0009156.1 mouse_genomes_project 8 114498058 114498132 - Mir7076 miRNA miRNA MGP_129S1SvImJ_T0018526.1 MGP_129S1SvImJ_G0015725.1 mouse_genomes_project 8 112543334 112552875 + Gm16349 processed_transcript processed_transcript MGP_129S1SvImJ_T0089977.1 MGP_129S1SvImJ_G0033949.1 mouse_genomes_project 8 95192617 95337538 + MGP_129S1SvImJ_P0089977 Gnao1 protein_coding protein_coding MGP_129S1SvImJ_T0089978.1 MGP_129S1SvImJ_G0033949.1 mouse_genomes_project 8 95194735 95195823 + Gnao1 protein_coding retained_intron MGP_129S1SvImJ_T0089979.1 MGP_129S1SvImJ_G0033949.1 mouse_genomes_project 8 95194842 95343384 + MGP_129S1SvImJ_P0089979 Gnao1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089980.1 MGP_129S1SvImJ_G0033949.1 mouse_genomes_project 8 95194892 95356401 + MGP_129S1SvImJ_P0089980 Gnao1 protein_coding protein_coding MGP_129S1SvImJ_T0089981.1 MGP_129S1SvImJ_G0033949.1 mouse_genomes_project 8 95194894 95355970 + MGP_129S1SvImJ_P0089981 Gnao1 protein_coding protein_coding MGP_129S1SvImJ_T0089982.1 MGP_129S1SvImJ_G0033949.1 mouse_genomes_project 8 95195368 95344641 + Gnao1 protein_coding processed_transcript MGP_129S1SvImJ_T0089983.1 MGP_129S1SvImJ_G0033949.1 mouse_genomes_project 8 95283238 95355177 + MGP_129S1SvImJ_P0089983 Gnao1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089984.1 MGP_129S1SvImJ_G0033949.1 mouse_genomes_project 8 95336639 95337810 + Gnao1 protein_coding retained_intron MGP_129S1SvImJ_T0089985.1 MGP_129S1SvImJ_G0033949.1 mouse_genomes_project 8 95337539 95355074 + MGP_129S1SvImJ_P0089985 Gnao1 protein_coding protein_coding MGP_129S1SvImJ_T0089986.1 MGP_129S1SvImJ_G0033949.1 mouse_genomes_project 8 95337539 95355095 + MGP_129S1SvImJ_P0089986 Gnao1 protein_coding protein_coding MGP_129S1SvImJ_T0089987.1 MGP_129S1SvImJ_G0033949.1 mouse_genomes_project 8 95340078 95343712 + Gnao1 protein_coding processed_transcript MGP_129S1SvImJ_T0089988.1 MGP_129S1SvImJ_G0033949.1 mouse_genomes_project 8 95349859 95354031 + Gnao1 protein_coding retained_intron MGP_129S1SvImJ_T0090022.1 MGP_129S1SvImJ_G0033962.1 mouse_genomes_project 8 95961047 95999793 + MGP_129S1SvImJ_P0090022 Cpne2 protein_coding protein_coding MGP_129S1SvImJ_T0090023.1 MGP_129S1SvImJ_G0033962.1 mouse_genomes_project 8 95961096 95978161 + Cpne2 protein_coding retained_intron MGP_129S1SvImJ_T0090024.1 MGP_129S1SvImJ_G0033962.1 mouse_genomes_project 8 95961124 95979156 + Cpne2 protein_coding processed_transcript MGP_129S1SvImJ_T0090025.1 MGP_129S1SvImJ_G0033962.1 mouse_genomes_project 8 95961124 95999654 + MGP_129S1SvImJ_P0090025 Cpne2 protein_coding protein_coding MGP_129S1SvImJ_T0090026.1 MGP_129S1SvImJ_G0033962.1 mouse_genomes_project 8 95991897 95999380 + Cpne2 protein_coding retained_intron MGP_129S1SvImJ_T0002364.1 MGP_129S1SvImJ_G0002274.1 mouse_genomes_project 8 123964641 123965476 - TEC TEC MGP_129S1SvImJ_T0088641.1 MGP_129S1SvImJ_G0033552.1 mouse_genomes_project 8 39228848 39288528 + MGP_129S1SvImJ_P0088641 Zdhhc2 protein_coding protein_coding MGP_129S1SvImJ_T0088642.1 MGP_129S1SvImJ_G0033552.1 mouse_genomes_project 8 39228854 39312787 + MGP_129S1SvImJ_P0088642 Zdhhc2 protein_coding protein_coding MGP_129S1SvImJ_T0088643.1 MGP_129S1SvImJ_G0033552.1 mouse_genomes_project 8 39228855 39272657 + Zdhhc2 protein_coding retained_intron MGP_129S1SvImJ_T0088644.1 MGP_129S1SvImJ_G0033552.1 mouse_genomes_project 8 39228873 39287067 + MGP_129S1SvImJ_P0088644 Zdhhc2 protein_coding protein_coding MGP_129S1SvImJ_T0088645.1 MGP_129S1SvImJ_G0033552.1 mouse_genomes_project 8 39230367 39261018 + Zdhhc2 protein_coding processed_transcript MGP_129S1SvImJ_T0088653.1 MGP_129S1SvImJ_G0033552.1 mouse_genomes_project 8 39303085 39312789 + Zdhhc2 protein_coding processed_transcript MGP_129S1SvImJ_T0088051.1 MGP_129S1SvImJ_G0033333.1 mouse_genomes_project 8 1270205 1311663 - MGP_129S1SvImJ_P0088051 Elavl1 protein_coding protein_coding MGP_129S1SvImJ_T0011028.1 MGP_129S1SvImJ_G0009144.1 mouse_genomes_project 8 107574526 107574623 - Mir328 miRNA miRNA MGP_129S1SvImJ_T0089835.1 MGP_129S1SvImJ_G0033903.1 mouse_genomes_project 8 86474628 86492217 - MGP_129S1SvImJ_P0089835 Dnaja2 protein_coding protein_coding MGP_129S1SvImJ_T0011004.1 MGP_129S1SvImJ_G0009120.1 mouse_genomes_project 8 84874866 84874985 - Mir1199 miRNA miRNA MGP_129S1SvImJ_T0088285.1 MGP_129S1SvImJ_G0033406.1 mouse_genomes_project 8 16409410 16428698 - Xkr5 protein_coding processed_transcript MGP_129S1SvImJ_T0088286.1 MGP_129S1SvImJ_G0033406.1 mouse_genomes_project 8 16409410 16428802 - MGP_129S1SvImJ_P0088286 Xkr5 protein_coding protein_coding MGP_129S1SvImJ_T0088287.1 MGP_129S1SvImJ_G0033406.1 mouse_genomes_project 8 16409410 16428800 - MGP_129S1SvImJ_P0088287 Xkr5 protein_coding protein_coding MGP_129S1SvImJ_T0088288.1 MGP_129S1SvImJ_G0033406.1 mouse_genomes_project 8 16409413 16428743 - MGP_129S1SvImJ_P0088288 Xkr5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088289.1 MGP_129S1SvImJ_G0033406.1 mouse_genomes_project 8 16409769 16428764 - MGP_129S1SvImJ_P0088289 Xkr5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088352.1 MGP_129S1SvImJ_G0033453.1 mouse_genomes_project 8 20330455 20421763 + MGP_129S1SvImJ_P0088352 Slc20a2 protein_coding protein_coding MGP_129S1SvImJ_T0088696.1 MGP_129S1SvImJ_G0033563.1 mouse_genomes_project 8 40233956 40255258 - MGP_129S1SvImJ_P0088696 Frg1 protein_coding protein_coding MGP_129S1SvImJ_T0018522.1 MGP_129S1SvImJ_G0015723.1 mouse_genomes_project 8 101082883 101191181 - Gm15680 processed_transcript processed_transcript MGP_129S1SvImJ_T0088533.1 MGP_129S1SvImJ_G0033509.1 mouse_genomes_project 8 25618188 25630627 - MGP_129S1SvImJ_P0088533 Chrna6 protein_coding protein_coding MGP_129S1SvImJ_T0090148.1 MGP_129S1SvImJ_G0034009.1 mouse_genomes_project 8 106479496 106529179 - MGP_129S1SvImJ_P0090148 Cmtm4 protein_coding protein_coding MGP_129S1SvImJ_T0010987.1 MGP_129S1SvImJ_G0009103.1 mouse_genomes_project 8 51514897 51515047 - Gm44387 miRNA miRNA MGP_129S1SvImJ_T0088601.1 MGP_129S1SvImJ_G0033532.1 mouse_genomes_project 8 32640894 32652444 - MGP_129S1SvImJ_P0088601 Leprotl1 protein_coding protein_coding MGP_129S1SvImJ_T0090083.1 MGP_129S1SvImJ_G0033982.1 mouse_genomes_project 8 96791004 96793590 + MGP_129S1SvImJ_P0090083 Tepp protein_coding protein_coding MGP_129S1SvImJ_T0090084.1 MGP_129S1SvImJ_G0033982.1 mouse_genomes_project 8 96791024 96802314 + MGP_129S1SvImJ_P0090084 Tepp protein_coding protein_coding MGP_129S1SvImJ_T0090085.1 MGP_129S1SvImJ_G0033982.1 mouse_genomes_project 8 96792037 96803100 + MGP_129S1SvImJ_P0090085 Tepp protein_coding protein_coding MGP_129S1SvImJ_T0090086.1 MGP_129S1SvImJ_G0033982.1 mouse_genomes_project 8 96792041 96803100 + MGP_129S1SvImJ_P0090086 Tepp protein_coding protein_coding MGP_129S1SvImJ_T0090087.1 MGP_129S1SvImJ_G0033982.1 mouse_genomes_project 8 96802208 96808092 + Tepp protein_coding retained_intron MGP_129S1SvImJ_T0090088.1 MGP_129S1SvImJ_G0033982.1 mouse_genomes_project 8 96802266 96807980 + MGP_129S1SvImJ_P0090088 Tepp protein_coding protein_coding MGP_129S1SvImJ_T0089656.1 MGP_129S1SvImJ_G0033859.1 mouse_genomes_project 8 85086546 85112826 - MGP_129S1SvImJ_P0089656 Zswim4 protein_coding protein_coding MGP_129S1SvImJ_T0087973.1 MGP_129S1SvImJ_G0033312.1 mouse_genomes_project 8 575765 589308 + MGP_129S1SvImJ_P0087973 Stxbp2 protein_coding protein_coding MGP_129S1SvImJ_T0087974.1 MGP_129S1SvImJ_G0033312.1 mouse_genomes_project 8 575960 581340 + Stxbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0087975.1 MGP_129S1SvImJ_G0033312.1 mouse_genomes_project 8 575961 581485 + Stxbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0087976.1 MGP_129S1SvImJ_G0033312.1 mouse_genomes_project 8 575961 578734 + Stxbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0087977.1 MGP_129S1SvImJ_G0033312.1 mouse_genomes_project 8 575965 579546 + Stxbp2 protein_coding retained_intron MGP_129S1SvImJ_T0087978.1 MGP_129S1SvImJ_G0033312.1 mouse_genomes_project 8 575973 581588 + Stxbp2 protein_coding retained_intron MGP_129S1SvImJ_T0087979.1 MGP_129S1SvImJ_G0033312.1 mouse_genomes_project 8 575978 588459 + MGP_129S1SvImJ_P0087979 Stxbp2 protein_coding protein_coding MGP_129S1SvImJ_T0087980.1 MGP_129S1SvImJ_G0033312.1 mouse_genomes_project 8 577725 578876 + Stxbp2 protein_coding retained_intron MGP_129S1SvImJ_T0087981.1 MGP_129S1SvImJ_G0033312.1 mouse_genomes_project 8 581261 581565 + Stxbp2 protein_coding retained_intron MGP_129S1SvImJ_T0087982.1 MGP_129S1SvImJ_G0033312.1 mouse_genomes_project 8 583045 586669 + Stxbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0087983.1 MGP_129S1SvImJ_G0033312.1 mouse_genomes_project 8 585468 588458 + Stxbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0087984.1 MGP_129S1SvImJ_G0033312.1 mouse_genomes_project 8 586394 587605 + Stxbp2 protein_coding retained_intron MGP_129S1SvImJ_T0087985.1 MGP_129S1SvImJ_G0033312.1 mouse_genomes_project 8 586422 587690 + Stxbp2 protein_coding retained_intron MGP_129S1SvImJ_T0087986.1 MGP_129S1SvImJ_G0033312.1 mouse_genomes_project 8 586495 588452 + Stxbp2 protein_coding retained_intron MGP_129S1SvImJ_T0087987.1 MGP_129S1SvImJ_G0033312.1 mouse_genomes_project 8 587279 588459 + Stxbp2 protein_coding retained_intron MGP_129S1SvImJ_T0090959.1 MGP_129S1SvImJ_G0034272.1 mouse_genomes_project 8 128245437 128260823 - MGP_129S1SvImJ_P0090959 Agt protein_coding protein_coding MGP_129S1SvImJ_T0011730.1 MGP_129S1SvImJ_G0009846.1 mouse_genomes_project 8 4586461 4586660 + Gm27585 misc_RNA misc_RNA MGP_129S1SvImJ_T0090871.1 MGP_129S1SvImJ_G0034245.1 mouse_genomes_project 8 126797171 126807579 - MGP_129S1SvImJ_P0090871 Chmp1a protein_coding protein_coding MGP_129S1SvImJ_T0090872.1 MGP_129S1SvImJ_G0034245.1 mouse_genomes_project 8 126800982 126804588 - Chmp1a protein_coding retained_intron MGP_129S1SvImJ_T0090873.1 MGP_129S1SvImJ_G0034245.1 mouse_genomes_project 8 126804405 126807582 - Chmp1a protein_coding retained_intron MGP_129S1SvImJ_T0101362.1 MGP_129S1SvImJ_G0039429.1 mouse_genomes_project 8 4702366 4702495 + Gm25169 snoRNA snoRNA MGP_129S1SvImJ_T0088226.1 MGP_129S1SvImJ_G0033391.1 mouse_genomes_project 8 11283304 11312701 + MGP_129S1SvImJ_P0088226 Fbxo25 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0088227.1 MGP_129S1SvImJ_G0033391.1 mouse_genomes_project 8 11283328 11313570 + MGP_129S1SvImJ_P0088227 Fbxo25 protein_coding protein_coding MGP_129S1SvImJ_T0100129.1 MGP_129S1SvImJ_G0038196.1 mouse_genomes_project 8 86240873 86240980 + Gm22336 snRNA snRNA MGP_129S1SvImJ_T0005387.1 MGP_129S1SvImJ_G0004566.1 mouse_genomes_project 8 68596703 68598235 + Gm15656 antisense antisense MGP_129S1SvImJ_T0090348.1 MGP_129S1SvImJ_G0034088.1 mouse_genomes_project 8 109277574 109287625 - MGP_129S1SvImJ_P0090348 Chtf8 protein_coding protein_coding MGP_129S1SvImJ_T0090349.1 MGP_129S1SvImJ_G0034088.1 mouse_genomes_project 8 109277742 109287247 - MGP_129S1SvImJ_P0090349 Chtf8 protein_coding protein_coding MGP_129S1SvImJ_T0090350.1 MGP_129S1SvImJ_G0034088.1 mouse_genomes_project 8 109277742 109287625 - MGP_129S1SvImJ_P0090350 Chtf8 protein_coding protein_coding MGP_129S1SvImJ_T0090351.1 MGP_129S1SvImJ_G0034088.1 mouse_genomes_project 8 109279978 109287623 - MGP_129S1SvImJ_P0090351 Chtf8 protein_coding protein_coding MGP_129S1SvImJ_T0090352.1 MGP_129S1SvImJ_G0034088.1 mouse_genomes_project 8 109280077 109287547 - MGP_129S1SvImJ_P0090352 Chtf8 protein_coding protein_coding MGP_129S1SvImJ_T0090353.1 MGP_129S1SvImJ_G0034088.1 mouse_genomes_project 8 109280154 109287633 - MGP_129S1SvImJ_P0090353 Chtf8 protein_coding protein_coding MGP_129S1SvImJ_T0005346.1 MGP_129S1SvImJ_G0004535.1 mouse_genomes_project 8 9093055 9094478 - Gm15875 antisense antisense MGP_129S1SvImJ_T0089437.1 MGP_129S1SvImJ_G0033779.1 mouse_genomes_project 8 72800535 72803160 + MGP_129S1SvImJ_P0089437 Klf2 protein_coding protein_coding MGP_129S1SvImJ_T0088497.1 MGP_129S1SvImJ_G0033492.1 mouse_genomes_project 8 24024009 24056632 - MGP_129S1SvImJ_P0088497 Hgsnat protein_coding protein_coding MGP_129S1SvImJ_T0009161.1 MGP_129S1SvImJ_G0007366.1 mouse_genomes_project 8 93294051 93309209 + Gm28516 lincRNA lincRNA MGP_129S1SvImJ_T0088969.1 MGP_129S1SvImJ_G0033641.1 mouse_genomes_project 8 64008298 64222363 - MGP_129S1SvImJ_P0088969 Tll1 protein_coding protein_coding MGP_129S1SvImJ_T0101417.1 MGP_129S1SvImJ_G0039484.1 mouse_genomes_project 8 114197141 114197273 + Gm24793 snoRNA snoRNA MGP_129S1SvImJ_T0089566.1 MGP_129S1SvImJ_G0033827.1 mouse_genomes_project 8 83954503 84067176 + MGP_129S1SvImJ_P0089566 Tbc1d9 protein_coding protein_coding MGP_129S1SvImJ_T0089567.1 MGP_129S1SvImJ_G0033827.1 mouse_genomes_project 8 83955011 84067689 + MGP_129S1SvImJ_P0089567 Tbc1d9 protein_coding protein_coding MGP_129S1SvImJ_T0089568.1 MGP_129S1SvImJ_G0033827.1 mouse_genomes_project 8 84054098 84065703 + Tbc1d9 protein_coding retained_intron MGP_129S1SvImJ_T0009157.1 MGP_129S1SvImJ_G0007363.1 mouse_genomes_project 8 93058499 93068237 + Irx3os lincRNA lincRNA MGP_129S1SvImJ_T0009158.1 MGP_129S1SvImJ_G0007363.1 mouse_genomes_project 8 93060259 93065913 + Irx3os lincRNA lincRNA MGP_129S1SvImJ_T0089452.1 MGP_129S1SvImJ_G0033788.1 mouse_genomes_project 8 73136031 73188660 + MGP_129S1SvImJ_P0089452 Nwd1 protein_coding protein_coding MGP_129S1SvImJ_T0089453.1 MGP_129S1SvImJ_G0033788.1 mouse_genomes_project 8 73136042 73202937 + MGP_129S1SvImJ_P0089453 Nwd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089454.1 MGP_129S1SvImJ_G0033788.1 mouse_genomes_project 8 73136091 73209678 + MGP_129S1SvImJ_P0089454 Nwd1 protein_coding protein_coding MGP_129S1SvImJ_T0089455.1 MGP_129S1SvImJ_G0033788.1 mouse_genomes_project 8 73136108 73206823 + MGP_129S1SvImJ_P0089455 Nwd1 protein_coding protein_coding MGP_129S1SvImJ_T0089456.1 MGP_129S1SvImJ_G0033788.1 mouse_genomes_project 8 73143914 73203007 + MGP_129S1SvImJ_P0089456 Nwd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089457.1 MGP_129S1SvImJ_G0033788.1 mouse_genomes_project 8 73147520 73202968 + MGP_129S1SvImJ_P0089457 Nwd1 protein_coding protein_coding MGP_129S1SvImJ_T0089458.1 MGP_129S1SvImJ_G0033788.1 mouse_genomes_project 8 73174295 73188057 + Nwd1 protein_coding processed_transcript MGP_129S1SvImJ_T0011728.1 MGP_129S1SvImJ_G0009844.1 mouse_genomes_project 8 1089033 1089286 - Gm23888 misc_RNA misc_RNA MGP_129S1SvImJ_T0016019.1 MGP_129S1SvImJ_G0014108.1 mouse_genomes_project 8 120260076 120260480 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0089461.1 MGP_129S1SvImJ_G0033790.1 mouse_genomes_project 8 73259643 73263003 + MGP_129S1SvImJ_P0089461 F2rl3 protein_coding protein_coding MGP_129S1SvImJ_T0009203.1 MGP_129S1SvImJ_G0007395.1 mouse_genomes_project 8 125061125 125064859 + 1700030M09Rik lincRNA lincRNA MGP_129S1SvImJ_T0009204.1 MGP_129S1SvImJ_G0007395.1 mouse_genomes_project 8 125061131 125064169 + 1700030M09Rik lincRNA lincRNA MGP_129S1SvImJ_T0088316.1 MGP_129S1SvImJ_G0033431.1 mouse_genomes_project 8 19554785 19570306 + MGP_129S1SvImJ_P0088316 Defb1 protein_coding protein_coding MGP_129S1SvImJ_T0089306.1 MGP_129S1SvImJ_G0033740.1 mouse_genomes_project 8 71760962 71764070 + MGP_129S1SvImJ_P0089306 Ocel1 protein_coding protein_coding MGP_129S1SvImJ_T0089307.1 MGP_129S1SvImJ_G0033740.1 mouse_genomes_project 8 71761003 71763371 + MGP_129S1SvImJ_P0089307 Ocel1 protein_coding protein_coding MGP_129S1SvImJ_T0089308.1 MGP_129S1SvImJ_G0033740.1 mouse_genomes_project 8 71761010 71769049 + MGP_129S1SvImJ_P0089308 Ocel1 protein_coding protein_coding MGP_129S1SvImJ_T0089309.1 MGP_129S1SvImJ_G0033740.1 mouse_genomes_project 8 71762154 71762637 + Ocel1 protein_coding retained_intron MGP_129S1SvImJ_T0090238.1 MGP_129S1SvImJ_G0034043.1 mouse_genomes_project 8 107646210 107657635 + MGP_129S1SvImJ_P0090238 Plekhg4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0090239.1 MGP_129S1SvImJ_G0034043.1 mouse_genomes_project 8 107648667 107650954 + MGP_129S1SvImJ_P0090239 Plekhg4 protein_coding protein_coding MGP_129S1SvImJ_T0090240.1 MGP_129S1SvImJ_G0034043.1 mouse_genomes_project 8 107650297 107658253 + MGP_129S1SvImJ_P0090240 Plekhg4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090241.1 MGP_129S1SvImJ_G0034043.1 mouse_genomes_project 8 107650774 107657635 + MGP_129S1SvImJ_P0090241 Plekhg4 protein_coding protein_coding MGP_129S1SvImJ_T0090242.1 MGP_129S1SvImJ_G0034043.1 mouse_genomes_project 8 107650774 107658256 + MGP_129S1SvImJ_P0090242 Plekhg4 protein_coding protein_coding MGP_129S1SvImJ_T0090243.1 MGP_129S1SvImJ_G0034043.1 mouse_genomes_project 8 107655887 107658249 + Plekhg4 protein_coding retained_intron MGP_129S1SvImJ_T0101365.1 MGP_129S1SvImJ_G0039432.1 mouse_genomes_project 8 14259833 14259953 + Gm25278 snoRNA snoRNA MGP_129S1SvImJ_T0089100.1 MGP_129S1SvImJ_G0033682.1 mouse_genomes_project 8 70123299 70131480 - MGP_129S1SvImJ_P0089100 Ndufa13 protein_coding protein_coding MGP_129S1SvImJ_T0088372.1 MGP_129S1SvImJ_G0033460.1 mouse_genomes_project 8 20734960 20824396 + MGP_129S1SvImJ_P0088372 Kat6a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0088373.1 MGP_129S1SvImJ_G0033460.1 mouse_genomes_project 8 20794116 20803944 + Kat6a protein_coding processed_transcript MGP_129S1SvImJ_T0090943.1 MGP_129S1SvImJ_G0034268.1 mouse_genomes_project 8 127672460 127701311 + MGP_129S1SvImJ_P0090943 Urb2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0090944.1 MGP_129S1SvImJ_G0034268.1 mouse_genomes_project 8 127672489 127701312 + MGP_129S1SvImJ_P0090944 Urb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0005369.1 MGP_129S1SvImJ_G0004550.1 mouse_genomes_project 8 32282798 32302611 + Gm26632 antisense antisense MGP_129S1SvImJ_T0090443.1 MGP_129S1SvImJ_G0034122.1 mouse_genomes_project 8 112783023 112813733 - MGP_129S1SvImJ_P0090443 Calb2 protein_coding protein_coding MGP_129S1SvImJ_T0088646.1 MGP_129S1SvImJ_G0033553.1 mouse_genomes_project 8 39295221 39314276 - MGP_129S1SvImJ_P0088646 Cnot7 protein_coding protein_coding MGP_129S1SvImJ_T0088647.1 MGP_129S1SvImJ_G0033553.1 mouse_genomes_project 8 39295223 39318371 - MGP_129S1SvImJ_P0088647 Cnot7 protein_coding protein_coding MGP_129S1SvImJ_T0088648.1 MGP_129S1SvImJ_G0033553.1 mouse_genomes_project 8 39295224 39314240 - Cnot7 protein_coding retained_intron MGP_129S1SvImJ_T0088649.1 MGP_129S1SvImJ_G0033553.1 mouse_genomes_project 8 39295228 39314240 - MGP_129S1SvImJ_P0088649 Cnot7 protein_coding protein_coding MGP_129S1SvImJ_T0088650.1 MGP_129S1SvImJ_G0033553.1 mouse_genomes_project 8 39295718 39313825 - MGP_129S1SvImJ_P0088650 Cnot7 protein_coding protein_coding MGP_129S1SvImJ_T0088651.1 MGP_129S1SvImJ_G0033553.1 mouse_genomes_project 8 39296696 39303634 - Cnot7 protein_coding processed_transcript MGP_129S1SvImJ_T0088652.1 MGP_129S1SvImJ_G0033553.1 mouse_genomes_project 8 39298313 39310225 - Cnot7 protein_coding retained_intron MGP_129S1SvImJ_T0088654.1 MGP_129S1SvImJ_G0033553.1 mouse_genomes_project 8 39303294 39310142 - Cnot7 protein_coding processed_transcript MGP_129S1SvImJ_T0088655.1 MGP_129S1SvImJ_G0033553.1 mouse_genomes_project 8 39309874 39314244 - Cnot7 protein_coding processed_transcript MGP_129S1SvImJ_T0088656.1 MGP_129S1SvImJ_G0033553.1 mouse_genomes_project 8 39312543 39318359 - Cnot7 protein_coding processed_transcript MGP_129S1SvImJ_T0088657.1 MGP_129S1SvImJ_G0033553.1 mouse_genomes_project 8 39312623 39313825 - Cnot7 protein_coding processed_transcript MGP_129S1SvImJ_T0010973.1 MGP_129S1SvImJ_G0009089.1 mouse_genomes_project 8 11744322 11744430 + Gm44347 miRNA miRNA MGP_129S1SvImJ_T0090128.1 MGP_129S1SvImJ_G0033997.1 mouse_genomes_project 8 104502903 104685229 - MGP_129S1SvImJ_P0090128 Cdh11 protein_coding protein_coding MGP_129S1SvImJ_T0088808.1 MGP_129S1SvImJ_G0033591.1 mouse_genomes_project 8 45725059 45749868 + MGP_129S1SvImJ_P0088808 Casp3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0009141.1 MGP_129S1SvImJ_G0007354.1 mouse_genomes_project 8 88206497 88296884 + Gm27169 lincRNA lincRNA MGP_129S1SvImJ_T0101381.1 MGP_129S1SvImJ_G0039448.1 mouse_genomes_project 8 44629709 44629846 - Gm23604 snoRNA snoRNA MGP_129S1SvImJ_T0087955.1 MGP_129S1SvImJ_G0033307.1 mouse_genomes_project 8 503947 509556 + protein_coding retained_intron MGP_129S1SvImJ_T0087956.1 MGP_129S1SvImJ_G0033307.1 mouse_genomes_project 8 503952 518122 + protein_coding retained_intron MGP_129S1SvImJ_T0090005.1 MGP_129S1SvImJ_G0033955.1 mouse_genomes_project 8 95551937 95553443 + MGP_129S1SvImJ_P0090005 Mt3 protein_coding protein_coding MGP_129S1SvImJ_T0102835.1 MGP_129S1SvImJ_G0040667.1 mouse_genomes_project 8 68754782 68755082 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0089416.1 MGP_129S1SvImJ_G0033768.1 mouse_genomes_project 8 72453867 72474896 - MGP_129S1SvImJ_P0089416 Cyp4f18 protein_coding protein_coding MGP_129S1SvImJ_T0089417.1 MGP_129S1SvImJ_G0033768.1 mouse_genomes_project 8 72453868 72458305 - Cyp4f18 protein_coding processed_transcript MGP_129S1SvImJ_T0089418.1 MGP_129S1SvImJ_G0033768.1 mouse_genomes_project 8 72454940 72458620 - Cyp4f18 protein_coding processed_transcript MGP_129S1SvImJ_T0100136.1 MGP_129S1SvImJ_G0038203.1 mouse_genomes_project 8 106645648 106645755 + Gm22148 snRNA snRNA MGP_129S1SvImJ_T0091017.1 MGP_129S1SvImJ_G0034292.1 mouse_genomes_project 8 130119501 130224186 + MGP_129S1SvImJ_P0091017 Slc35f3 protein_coding protein_coding MGP_129S1SvImJ_T0089874.1 MGP_129S1SvImJ_G0033915.1 mouse_genomes_project 8 89172335 89193553 + MGP_129S1SvImJ_P0089874 Cnep1r1 protein_coding protein_coding MGP_129S1SvImJ_T0089875.1 MGP_129S1SvImJ_G0033915.1 mouse_genomes_project 8 89172344 89189289 + Cnep1r1 protein_coding processed_transcript MGP_129S1SvImJ_T0089876.1 MGP_129S1SvImJ_G0033915.1 mouse_genomes_project 8 89172353 89193557 + MGP_129S1SvImJ_P0089876 Cnep1r1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089877.1 MGP_129S1SvImJ_G0033915.1 mouse_genomes_project 8 89172366 89192927 + Cnep1r1 protein_coding retained_intron MGP_129S1SvImJ_T0089878.1 MGP_129S1SvImJ_G0033915.1 mouse_genomes_project 8 89172366 89190122 + MGP_129S1SvImJ_P0089878 Cnep1r1 protein_coding protein_coding MGP_129S1SvImJ_T0089879.1 MGP_129S1SvImJ_G0033915.1 mouse_genomes_project 8 89172373 89189505 + MGP_129S1SvImJ_P0089879 Cnep1r1 protein_coding protein_coding MGP_129S1SvImJ_T0088920.1 MGP_129S1SvImJ_G0033632.1 mouse_genomes_project 8 60792720 60838089 - MGP_129S1SvImJ_P0088920 Clcn3 protein_coding protein_coding MGP_129S1SvImJ_T0088921.1 MGP_129S1SvImJ_G0033632.1 mouse_genomes_project 8 60793197 60806442 - Clcn3 protein_coding processed_transcript MGP_129S1SvImJ_T0088922.1 MGP_129S1SvImJ_G0033632.1 mouse_genomes_project 8 60794232 60838216 - MGP_129S1SvImJ_P0088922 Clcn3 protein_coding protein_coding MGP_129S1SvImJ_T0088923.1 MGP_129S1SvImJ_G0033632.1 mouse_genomes_project 8 60794259 60838701 - Clcn3 protein_coding retained_intron MGP_129S1SvImJ_T0088924.1 MGP_129S1SvImJ_G0033632.1 mouse_genomes_project 8 60794259 60866741 - MGP_129S1SvImJ_P0088924 Clcn3 protein_coding protein_coding MGP_129S1SvImJ_T0088925.1 MGP_129S1SvImJ_G0033632.1 mouse_genomes_project 8 60794259 60866741 - MGP_129S1SvImJ_P0088925 Clcn3 protein_coding protein_coding MGP_129S1SvImJ_T0088926.1 MGP_129S1SvImJ_G0033632.1 mouse_genomes_project 8 60811763 60838247 - Clcn3 protein_coding retained_intron MGP_129S1SvImJ_T0088927.1 MGP_129S1SvImJ_G0033632.1 mouse_genomes_project 8 60818826 60866746 - Clcn3 protein_coding retained_intron MGP_129S1SvImJ_T0088928.1 MGP_129S1SvImJ_G0033632.1 mouse_genomes_project 8 60822109 60866788 - Clcn3 protein_coding retained_intron MGP_129S1SvImJ_T0015974.1 MGP_129S1SvImJ_G0014063.1 mouse_genomes_project 8 32844636 32845848 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0089075.1 MGP_129S1SvImJ_G0033677.1 mouse_genomes_project 8 70021865 70035005 + MGP_129S1SvImJ_P0089075 Gmip protein_coding protein_coding MGP_129S1SvImJ_T0089076.1 MGP_129S1SvImJ_G0033677.1 mouse_genomes_project 8 70021876 70032117 + MGP_129S1SvImJ_P0089076 Gmip protein_coding protein_coding MGP_129S1SvImJ_T0089077.1 MGP_129S1SvImJ_G0033677.1 mouse_genomes_project 8 70023675 70027008 + Gmip protein_coding processed_transcript MGP_129S1SvImJ_T0089078.1 MGP_129S1SvImJ_G0033677.1 mouse_genomes_project 8 70023831 70024808 + Gmip protein_coding processed_transcript MGP_129S1SvImJ_T0089079.1 MGP_129S1SvImJ_G0033677.1 mouse_genomes_project 8 70026418 70027256 + Gmip protein_coding retained_intron MGP_129S1SvImJ_T0089080.1 MGP_129S1SvImJ_G0033677.1 mouse_genomes_project 8 70027039 70029387 + Gmip protein_coding processed_transcript MGP_129S1SvImJ_T0089081.1 MGP_129S1SvImJ_G0033677.1 mouse_genomes_project 8 70029850 70030737 + Gmip protein_coding retained_intron MGP_129S1SvImJ_T0089082.1 MGP_129S1SvImJ_G0033677.1 mouse_genomes_project 8 70030970 70032122 + MGP_129S1SvImJ_P0089082 Gmip protein_coding protein_coding MGP_129S1SvImJ_T0089083.1 MGP_129S1SvImJ_G0033677.1 mouse_genomes_project 8 70031206 70034462 + Gmip protein_coding processed_transcript MGP_129S1SvImJ_T0101373.1 MGP_129S1SvImJ_G0039440.1 mouse_genomes_project 8 23665020 23665151 - Gm23184 snoRNA snoRNA MGP_129S1SvImJ_T0088353.1 MGP_129S1SvImJ_G0033454.1 mouse_genomes_project 8 20429241 20447832 - MGP_129S1SvImJ_P0088353 protein_coding protein_coding MGP_129S1SvImJ_T0011006.1 MGP_129S1SvImJ_G0009122.1 mouse_genomes_project 8 85053304 85053376 - Mir181d miRNA miRNA MGP_129S1SvImJ_T0088555.1 MGP_129S1SvImJ_G0033521.1 mouse_genomes_project 8 31840720 31873045 + MGP_129S1SvImJ_P0088555 Purg protein_coding protein_coding MGP_129S1SvImJ_T0088556.1 MGP_129S1SvImJ_G0033521.1 mouse_genomes_project 8 31840720 31841927 + MGP_129S1SvImJ_P0088556 Purg protein_coding protein_coding MGP_129S1SvImJ_T0009098.1 MGP_129S1SvImJ_G0007316.1 mouse_genomes_project 8 32542337 32550874 + Gm9951 lincRNA lincRNA MGP_129S1SvImJ_T0009099.1 MGP_129S1SvImJ_G0007316.1 mouse_genomes_project 8 32549647 32552080 + Gm9951 lincRNA lincRNA MGP_129S1SvImJ_T0089249.1 MGP_129S1SvImJ_G0033719.1 mouse_genomes_project 8 70986506 70989904 + MGP_129S1SvImJ_P0089249 Jund protein_coding protein_coding MGP_129S1SvImJ_T0089270.1 MGP_129S1SvImJ_G0033729.1 mouse_genomes_project 8 71143881 71150118 - MGP_129S1SvImJ_P0089270 Arrdc2 protein_coding protein_coding MGP_129S1SvImJ_T0015988.1 MGP_129S1SvImJ_G0014077.1 mouse_genomes_project 8 65846759 65847044 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009145.1 MGP_129S1SvImJ_G0007358.1 mouse_genomes_project 8 88483342 88534974 + Gm2694 lincRNA lincRNA MGP_129S1SvImJ_T0009146.1 MGP_129S1SvImJ_G0007358.1 mouse_genomes_project 8 88483342 88531524 + Gm2694 lincRNA lincRNA MGP_129S1SvImJ_T0009147.1 MGP_129S1SvImJ_G0007358.1 mouse_genomes_project 8 88483342 88534975 + Gm2694 lincRNA lincRNA MGP_129S1SvImJ_T0009148.1 MGP_129S1SvImJ_G0007358.1 mouse_genomes_project 8 88483374 88534973 + Gm2694 lincRNA lincRNA MGP_129S1SvImJ_T0009149.1 MGP_129S1SvImJ_G0007358.1 mouse_genomes_project 8 88483646 88534429 + Gm2694 lincRNA lincRNA MGP_129S1SvImJ_T0009150.1 MGP_129S1SvImJ_G0007358.1 mouse_genomes_project 8 88483664 88534975 + Gm2694 lincRNA lincRNA MGP_129S1SvImJ_T0009151.1 MGP_129S1SvImJ_G0007358.1 mouse_genomes_project 8 88483687 88511745 + Gm2694 lincRNA lincRNA MGP_129S1SvImJ_T0088374.1 MGP_129S1SvImJ_G0033461.1 mouse_genomes_project 8 20860750 21047665 + MGP_129S1SvImJ_P0088374 Ank1 protein_coding protein_coding MGP_129S1SvImJ_T0088375.1 MGP_129S1SvImJ_G0033461.1 mouse_genomes_project 8 20861863 21048226 + MGP_129S1SvImJ_P0088375 Ank1 protein_coding protein_coding MGP_129S1SvImJ_T0088376.1 MGP_129S1SvImJ_G0033461.1 mouse_genomes_project 8 20862117 21046039 + MGP_129S1SvImJ_P0088376 Ank1 protein_coding protein_coding MGP_129S1SvImJ_T0088377.1 MGP_129S1SvImJ_G0033461.1 mouse_genomes_project 8 20923974 21046522 + MGP_129S1SvImJ_P0088377 Ank1 protein_coding protein_coding MGP_129S1SvImJ_T0088378.1 MGP_129S1SvImJ_G0033461.1 mouse_genomes_project 8 20924003 21047013 + MGP_129S1SvImJ_P0088378 Ank1 protein_coding protein_coding MGP_129S1SvImJ_T0088379.1 MGP_129S1SvImJ_G0033461.1 mouse_genomes_project 8 20924106 21047013 + MGP_129S1SvImJ_P0088379 Ank1 protein_coding protein_coding MGP_129S1SvImJ_T0088380.1 MGP_129S1SvImJ_G0033461.1 mouse_genomes_project 8 20948435 21048229 + MGP_129S1SvImJ_P0088380 Ank1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088381.1 MGP_129S1SvImJ_G0033461.1 mouse_genomes_project 8 20948451 21048229 + MGP_129S1SvImJ_P0088381 Ank1 protein_coding protein_coding MGP_129S1SvImJ_T0088382.1 MGP_129S1SvImJ_G0033461.1 mouse_genomes_project 8 20948487 21048229 + MGP_129S1SvImJ_P0088382 Ank1 protein_coding protein_coding MGP_129S1SvImJ_T0088383.1 MGP_129S1SvImJ_G0033461.1 mouse_genomes_project 8 20948701 21047420 + MGP_129S1SvImJ_P0088383 Ank1 protein_coding protein_coding MGP_129S1SvImJ_T0088384.1 MGP_129S1SvImJ_G0033461.1 mouse_genomes_project 8 20948701 21047420 + MGP_129S1SvImJ_P0088384 Ank1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088385.1 MGP_129S1SvImJ_G0033461.1 mouse_genomes_project 8 20986821 21020243 + MGP_129S1SvImJ_P0088385 Ank1 protein_coding protein_coding MGP_129S1SvImJ_T0088386.1 MGP_129S1SvImJ_G0033461.1 mouse_genomes_project 8 21017541 21024822 + Ank1 protein_coding retained_intron MGP_129S1SvImJ_T0088387.1 MGP_129S1SvImJ_G0033461.1 mouse_genomes_project 8 21036803 21047011 + MGP_129S1SvImJ_P0088387 Ank1 protein_coding protein_coding MGP_129S1SvImJ_T0088388.1 MGP_129S1SvImJ_G0033461.1 mouse_genomes_project 8 21036878 21046426 + MGP_129S1SvImJ_P0088388 Ank1 protein_coding protein_coding MGP_129S1SvImJ_T0088389.1 MGP_129S1SvImJ_G0033461.1 mouse_genomes_project 8 21037050 21046037 + MGP_129S1SvImJ_P0088389 Ank1 protein_coding protein_coding MGP_129S1SvImJ_T0088390.1 MGP_129S1SvImJ_G0033461.1 mouse_genomes_project 8 21037866 21046101 + Ank1 protein_coding retained_intron MGP_129S1SvImJ_T0101367.1 MGP_129S1SvImJ_G0039434.1 mouse_genomes_project 8 15952124 15952255 - Gm24469 snoRNA snoRNA MGP_129S1SvImJ_T0088721.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44554434 44887959 + MGP_129S1SvImJ_P0088721 Sorbs2 protein_coding protein_coding MGP_129S1SvImJ_T0088722.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44554440 44836596 + Sorbs2 protein_coding retained_intron MGP_129S1SvImJ_T0088723.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44554444 44855494 + MGP_129S1SvImJ_P0088723 Sorbs2 protein_coding protein_coding MGP_129S1SvImJ_T0088724.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44554464 44835127 + MGP_129S1SvImJ_P0088724 Sorbs2 protein_coding protein_coding MGP_129S1SvImJ_T0088725.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44678243 44801427 + MGP_129S1SvImJ_P0088725 Sorbs2 protein_coding protein_coding MGP_129S1SvImJ_T0088726.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44678470 44801449 + MGP_129S1SvImJ_P0088726 Sorbs2 protein_coding protein_coding MGP_129S1SvImJ_T0088727.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44678683 44702168 + Sorbs2 protein_coding processed_transcript MGP_129S1SvImJ_T0088728.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44678699 44802252 + MGP_129S1SvImJ_P0088728 Sorbs2 protein_coding protein_coding MGP_129S1SvImJ_T0088729.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44711867 44881195 + MGP_129S1SvImJ_P0088729 Sorbs2 protein_coding protein_coding MGP_129S1SvImJ_T0088730.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44712245 44835127 + MGP_129S1SvImJ_P0088730 Sorbs2 protein_coding protein_coding MGP_129S1SvImJ_T0088731.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44712251 44887956 + MGP_129S1SvImJ_P0088731 Sorbs2 protein_coding protein_coding MGP_129S1SvImJ_T0088732.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44712271 44801286 + Sorbs2 protein_coding retained_intron MGP_129S1SvImJ_T0088733.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44712284 44802209 + MGP_129S1SvImJ_P0088733 Sorbs2 protein_coding protein_coding MGP_129S1SvImJ_T0088734.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44712359 44798039 + Sorbs2 protein_coding retained_intron MGP_129S1SvImJ_T0088735.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44712379 44830903 + MGP_129S1SvImJ_P0088735 Sorbs2 protein_coding protein_coding MGP_129S1SvImJ_T0088736.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44715568 44815490 + MGP_129S1SvImJ_P0088736 Sorbs2 protein_coding protein_coding MGP_129S1SvImJ_T0088737.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44742829 44815539 + MGP_129S1SvImJ_P0088737 Sorbs2 protein_coding protein_coding MGP_129S1SvImJ_T0088738.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44742833 44815499 + MGP_129S1SvImJ_P0088738 Sorbs2 protein_coding protein_coding MGP_129S1SvImJ_T0088739.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44787709 44887965 + MGP_129S1SvImJ_P0088739 Sorbs2 protein_coding protein_coding MGP_129S1SvImJ_T0088740.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44820116 44887957 + MGP_129S1SvImJ_P0088740 Sorbs2 protein_coding protein_coding MGP_129S1SvImJ_T0088741.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44820850 44859823 + Sorbs2 protein_coding processed_transcript MGP_129S1SvImJ_T0088742.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44828088 44852967 + MGP_129S1SvImJ_P0088742 Sorbs2 protein_coding protein_coding MGP_129S1SvImJ_T0088743.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44828804 44852935 + MGP_129S1SvImJ_P0088743 Sorbs2 protein_coding protein_coding MGP_129S1SvImJ_T0088744.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44830603 44834142 + Sorbs2 protein_coding retained_intron MGP_129S1SvImJ_T0088745.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44833917 44855168 + MGP_129S1SvImJ_P0088745 Sorbs2 protein_coding protein_coding MGP_129S1SvImJ_T0088746.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44863261 44863973 + Sorbs2 protein_coding retained_intron MGP_129S1SvImJ_T0088747.1 MGP_129S1SvImJ_G0033577.1 mouse_genomes_project 8 44865857 44867421 + Sorbs2 protein_coding processed_transcript MGP_129S1SvImJ_T0090549.1 MGP_129S1SvImJ_G0034153.1 mouse_genomes_project 8 114852210 114863343 + MGP_129S1SvImJ_P0090549 Terf2ip protein_coding protein_coding MGP_129S1SvImJ_T0088087.1 MGP_129S1SvImJ_G0033350.1 mouse_genomes_project 8 8178620 8200096 - MGP_129S1SvImJ_P0088087 Irs2 protein_coding protein_coding MGP_129S1SvImJ_T0088121.1 MGP_129S1SvImJ_G0033363.1 mouse_genomes_project 8 9856709 9874497 - MGP_129S1SvImJ_P0088121 protein_coding protein_coding MGP_129S1SvImJ_T0088911.1 MGP_129S1SvImJ_G0033630.1 mouse_genomes_project 8 60517085 60559790 + MGP_129S1SvImJ_P0088911 Mfap3l protein_coding protein_coding MGP_129S1SvImJ_T0088912.1 MGP_129S1SvImJ_G0033630.1 mouse_genomes_project 8 60517118 60561583 + MGP_129S1SvImJ_P0088912 Mfap3l protein_coding protein_coding MGP_129S1SvImJ_T0088913.1 MGP_129S1SvImJ_G0033630.1 mouse_genomes_project 8 60539029 60557316 + MGP_129S1SvImJ_P0088913 Mfap3l protein_coding protein_coding MGP_129S1SvImJ_T0088914.1 MGP_129S1SvImJ_G0033630.1 mouse_genomes_project 8 60539465 60557212 + MGP_129S1SvImJ_P0088914 Mfap3l protein_coding protein_coding MGP_129S1SvImJ_T0090442.1 MGP_129S1SvImJ_G0034121.1 mouse_genomes_project 8 112746400 112748391 + MGP_129S1SvImJ_P0090442 Gm21964 protein_coding protein_coding MGP_129S1SvImJ_T0101397.1 MGP_129S1SvImJ_G0039464.1 mouse_genomes_project 8 71210746 71210877 - Snora68 snoRNA snoRNA MGP_129S1SvImJ_T0089189.1 MGP_129S1SvImJ_G0033702.1 mouse_genomes_project 8 70595198 70618905 - MGP_129S1SvImJ_P0089189 Upf1 protein_coding protein_coding MGP_129S1SvImJ_T0089190.1 MGP_129S1SvImJ_G0033702.1 mouse_genomes_project 8 70596041 70618647 - MGP_129S1SvImJ_P0089190 Upf1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0005423.1 MGP_129S1SvImJ_G0004597.1 mouse_genomes_project 8 126268362 126270662 + Gm10612 antisense antisense MGP_129S1SvImJ_T0089503.1 MGP_129S1SvImJ_G0033804.1 mouse_genomes_project 8 78816904 78824583 + MGP_129S1SvImJ_P0089503 Ttc29 protein_coding protein_coding MGP_129S1SvImJ_T0089504.1 MGP_129S1SvImJ_G0033804.1 mouse_genomes_project 8 78816909 78824441 + MGP_129S1SvImJ_P0089504 Ttc29 protein_coding protein_coding MGP_129S1SvImJ_T0089505.1 MGP_129S1SvImJ_G0033804.1 mouse_genomes_project 8 78816922 78821626 + Ttc29 protein_coding processed_transcript MGP_129S1SvImJ_T0089506.1 MGP_129S1SvImJ_G0033804.1 mouse_genomes_project 8 78816949 79005973 + MGP_129S1SvImJ_P0089506 Ttc29 protein_coding protein_coding MGP_129S1SvImJ_T0089507.1 MGP_129S1SvImJ_G0033804.1 mouse_genomes_project 8 78816957 78821570 + Ttc29 protein_coding processed_transcript MGP_129S1SvImJ_T0089508.1 MGP_129S1SvImJ_G0033804.1 mouse_genomes_project 8 78822401 79005330 + MGP_129S1SvImJ_P0089508 Ttc29 protein_coding protein_coding MGP_129S1SvImJ_T0089509.1 MGP_129S1SvImJ_G0033804.1 mouse_genomes_project 8 78855256 78880658 + Ttc29 protein_coding retained_intron MGP_129S1SvImJ_T0089510.1 MGP_129S1SvImJ_G0033804.1 mouse_genomes_project 8 79001255 79005421 + Ttc29 protein_coding processed_transcript MGP_129S1SvImJ_T0090269.1 MGP_129S1SvImJ_G0034053.1 mouse_genomes_project 8 107989052 107996426 + MGP_129S1SvImJ_P0090269 Rltpr protein_coding unknown_likely_coding MGP_129S1SvImJ_T0090270.1 MGP_129S1SvImJ_G0034053.1 mouse_genomes_project 8 107993684 108000957 + MGP_129S1SvImJ_P0090270 Rltpr protein_coding protein_coding MGP_129S1SvImJ_T0090271.1 MGP_129S1SvImJ_G0034053.1 mouse_genomes_project 8 107996662 108000982 + MGP_129S1SvImJ_P0090271 Rltpr protein_coding unknown_likely_coding MGP_129S1SvImJ_T0090803.1 MGP_129S1SvImJ_G0034225.1 mouse_genomes_project 8 125970777 125980583 - MGP_129S1SvImJ_P0090803 Mvd protein_coding protein_coding MGP_129S1SvImJ_T0100115.1 MGP_129S1SvImJ_G0038182.1 mouse_genomes_project 8 51551390 51551529 + Gm24929 snRNA snRNA MGP_129S1SvImJ_T0090536.1 MGP_129S1SvImJ_G0034145.1 mouse_genomes_project 8 114520668 114543448 - MGP_129S1SvImJ_P0090536 Bcar1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0090537.1 MGP_129S1SvImJ_G0034145.1 mouse_genomes_project 8 114520685 114555246 - MGP_129S1SvImJ_P0090537 Bcar1 protein_coding protein_coding MGP_129S1SvImJ_T0011048.1 MGP_129S1SvImJ_G0009164.1 mouse_genomes_project 8 126184853 126184964 - Mir6396 miRNA miRNA MGP_129S1SvImJ_T0088673.1 MGP_129S1SvImJ_G0033559.1 mouse_genomes_project 8 39822934 39970742 - MGP_129S1SvImJ_P0088673 Mtus1 protein_coding protein_coding MGP_129S1SvImJ_T0088674.1 MGP_129S1SvImJ_G0033559.1 mouse_genomes_project 8 39822938 39951828 - MGP_129S1SvImJ_P0088674 Mtus1 protein_coding protein_coding MGP_129S1SvImJ_T0088675.1 MGP_129S1SvImJ_G0033559.1 mouse_genomes_project 8 39822938 39887026 - MGP_129S1SvImJ_P0088675 Mtus1 protein_coding protein_coding MGP_129S1SvImJ_T0088676.1 MGP_129S1SvImJ_G0033559.1 mouse_genomes_project 8 39823072 39873899 - MGP_129S1SvImJ_P0088676 Mtus1 protein_coding protein_coding MGP_129S1SvImJ_T0088677.1 MGP_129S1SvImJ_G0033559.1 mouse_genomes_project 8 39830760 39832196 - Mtus1 protein_coding retained_intron MGP_129S1SvImJ_T0088678.1 MGP_129S1SvImJ_G0033559.1 mouse_genomes_project 8 39832666 39848801 - Mtus1 protein_coding processed_transcript MGP_129S1SvImJ_T0088679.1 MGP_129S1SvImJ_G0033559.1 mouse_genomes_project 8 39832823 39848815 - MGP_129S1SvImJ_P0088679 Mtus1 protein_coding protein_coding MGP_129S1SvImJ_T0088680.1 MGP_129S1SvImJ_G0033559.1 mouse_genomes_project 8 39834342 39848366 - MGP_129S1SvImJ_P0088680 Mtus1 protein_coding protein_coding MGP_129S1SvImJ_T0088681.1 MGP_129S1SvImJ_G0033559.1 mouse_genomes_project 8 39846386 39871645 - Mtus1 protein_coding processed_transcript MGP_129S1SvImJ_T0088682.1 MGP_129S1SvImJ_G0033559.1 mouse_genomes_project 8 39851010 39887015 - Mtus1 protein_coding processed_transcript MGP_129S1SvImJ_T0088683.1 MGP_129S1SvImJ_G0033559.1 mouse_genomes_project 8 39851571 39854906 - Mtus1 protein_coding retained_intron MGP_129S1SvImJ_T0088684.1 MGP_129S1SvImJ_G0033559.1 mouse_genomes_project 8 39882119 39970742 - MGP_129S1SvImJ_P0088684 Mtus1 protein_coding protein_coding MGP_129S1SvImJ_T0088685.1 MGP_129S1SvImJ_G0033559.1 mouse_genomes_project 8 39882274 39920294 - MGP_129S1SvImJ_P0088685 Mtus1 protein_coding protein_coding MGP_129S1SvImJ_T0088686.1 MGP_129S1SvImJ_G0033559.1 mouse_genomes_project 8 39922080 39970734 - MGP_129S1SvImJ_P0088686 Mtus1 protein_coding protein_coding MGP_129S1SvImJ_T0011743.1 MGP_129S1SvImJ_G0009859.1 mouse_genomes_project 8 88658512 88658867 + Gm24841 misc_RNA misc_RNA MGP_129S1SvImJ_T0090531.1 MGP_129S1SvImJ_G0034142.1 mouse_genomes_project 8 114424317 114429120 - Ldhd protein_coding retained_intron MGP_129S1SvImJ_T0090532.1 MGP_129S1SvImJ_G0034142.1 mouse_genomes_project 8 114426035 114430868 - Ldhd protein_coding retained_intron MGP_129S1SvImJ_T0090533.1 MGP_129S1SvImJ_G0034142.1 mouse_genomes_project 8 114426803 114430907 - MGP_129S1SvImJ_P0090533 Ldhd protein_coding protein_coding MGP_129S1SvImJ_T0101400.1 MGP_129S1SvImJ_G0039467.1 mouse_genomes_project 8 77713589 77713719 - Gm24838 snoRNA snoRNA MGP_129S1SvImJ_T0009135.1 MGP_129S1SvImJ_G0007349.1 mouse_genomes_project 8 87887276 87903524 + Gm27167 lincRNA lincRNA MGP_129S1SvImJ_T0101388.1 MGP_129S1SvImJ_G0039455.1 mouse_genomes_project 8 60691727 60691835 - Gm23329 snoRNA snoRNA MGP_129S1SvImJ_T0091015.1 MGP_129S1SvImJ_G0034290.1 mouse_genomes_project 8 129705704 129742688 + MGP_129S1SvImJ_P0091015 BC021891 protein_coding protein_coding MGP_129S1SvImJ_T0089756.1 MGP_129S1SvImJ_G0033880.1 mouse_genomes_project 8 85841686 85877652 - MGP_129S1SvImJ_P0089756 protein_coding protein_coding MGP_129S1SvImJ_T0089757.1 MGP_129S1SvImJ_G0033880.1 mouse_genomes_project 8 85841689 85854720 - protein_coding retained_intron MGP_129S1SvImJ_T0089758.1 MGP_129S1SvImJ_G0033880.1 mouse_genomes_project 8 85841691 85877658 - MGP_129S1SvImJ_P0089758 protein_coding protein_coding MGP_129S1SvImJ_T0089760.1 MGP_129S1SvImJ_G0033880.1 mouse_genomes_project 8 85851126 85858915 - protein_coding retained_intron MGP_129S1SvImJ_T0089761.1 MGP_129S1SvImJ_G0033880.1 mouse_genomes_project 8 85854334 85866668 - protein_coding retained_intron MGP_129S1SvImJ_T0089762.1 MGP_129S1SvImJ_G0033880.1 mouse_genomes_project 8 85875221 85877643 - protein_coding retained_intron MGP_129S1SvImJ_T0088405.1 MGP_129S1SvImJ_G0033470.1 mouse_genomes_project 8 22521254 22548291 - Ido2 protein_coding processed_transcript MGP_129S1SvImJ_T0088406.1 MGP_129S1SvImJ_G0033470.1 mouse_genomes_project 8 22521814 22572724 - MGP_129S1SvImJ_P0088406 Ido2 protein_coding protein_coding MGP_129S1SvImJ_T0088407.1 MGP_129S1SvImJ_G0033470.1 mouse_genomes_project 8 22522814 22530159 - Ido2 protein_coding retained_intron MGP_129S1SvImJ_T0088408.1 MGP_129S1SvImJ_G0033470.1 mouse_genomes_project 8 22544451 22548248 - Ido2 protein_coding processed_transcript MGP_129S1SvImJ_T0100121.1 MGP_129S1SvImJ_G0038188.1 mouse_genomes_project 8 66029056 66029163 - Gm24205 snRNA snRNA MGP_129S1SvImJ_T0088073.1 MGP_129S1SvImJ_G0033339.1 mouse_genomes_project 8 2087662 2107247 - MGP_129S1SvImJ_P0088073 Slc10a2 protein_coding protein_coding MGP_129S1SvImJ_T0005345.1 MGP_129S1SvImJ_G0004534.1 mouse_genomes_project 8 8606002 8624741 - Gm15419 antisense antisense MGP_129S1SvImJ_T0009143.1 MGP_129S1SvImJ_G0007356.1 mouse_genomes_project 8 88468084 88469076 + 4930535O05Rik lincRNA lincRNA MGP_129S1SvImJ_T0090407.1 MGP_129S1SvImJ_G0034107.1 mouse_genomes_project 8 112166066 112174209 + MGP_129S1SvImJ_P0090407 Txnl4b protein_coding protein_coding MGP_129S1SvImJ_T0090408.1 MGP_129S1SvImJ_G0034107.1 mouse_genomes_project 8 112169045 112173681 + MGP_129S1SvImJ_P0090408 Txnl4b protein_coding protein_coding MGP_129S1SvImJ_T0010983.1 MGP_129S1SvImJ_G0009099.1 mouse_genomes_project 8 34392201 34392328 - Gm44474 miRNA miRNA MGP_129S1SvImJ_T0098647.1 MGP_129S1SvImJ_G0036732.1 mouse_genomes_project 8 12882262 12882355 + Gm24222 rRNA rRNA MGP_129S1SvImJ_T0002367.1 MGP_129S1SvImJ_G0002277.1 mouse_genomes_project 8 125472453 125473252 - TEC TEC MGP_129S1SvImJ_T0088859.1 MGP_129S1SvImJ_G0033610.1 mouse_genomes_project 8 53717329 53829276 + MGP_129S1SvImJ_P0088859 Vegfc protein_coding protein_coding MGP_129S1SvImJ_T0089828.1 MGP_129S1SvImJ_G0033901.1 mouse_genomes_project 8 86339193 86365138 - MGP_129S1SvImJ_P0089828 4921524J17Rik protein_coding protein_coding MGP_129S1SvImJ_T0089829.1 MGP_129S1SvImJ_G0033901.1 mouse_genomes_project 8 86339287 86365021 - MGP_129S1SvImJ_P0089829 4921524J17Rik protein_coding unknown_likely_coding MGP_129S1SvImJ_T0009119.1 MGP_129S1SvImJ_G0007335.1 mouse_genomes_project 8 71333706 71355185 - lincRNA lincRNA MGP_129S1SvImJ_T0090566.1 MGP_129S1SvImJ_G0034159.1 mouse_genomes_project 8 117169721 117194921 + Vat1l protein_coding processed_transcript MGP_129S1SvImJ_T0090567.1 MGP_129S1SvImJ_G0034159.1 mouse_genomes_project 8 117169739 117345794 + MGP_129S1SvImJ_P0090567 Vat1l protein_coding protein_coding MGP_129S1SvImJ_T0090568.1 MGP_129S1SvImJ_G0034159.1 mouse_genomes_project 8 117169743 117194915 + MGP_129S1SvImJ_P0090568 Vat1l protein_coding protein_coding MGP_129S1SvImJ_T0090569.1 MGP_129S1SvImJ_G0034159.1 mouse_genomes_project 8 117339812 117345793 + Vat1l protein_coding retained_intron MGP_129S1SvImJ_T0099011.1 MGP_129S1SvImJ_G0037084.1 mouse_genomes_project 8 86964660 86967061 + Hm629797 sense_intronic sense_intronic MGP_129S1SvImJ_T0090785.1 MGP_129S1SvImJ_G0034220.1 mouse_genomes_project 8 125813199 125867828 + MGP_129S1SvImJ_P0090785 Zfpm1 protein_coding protein_coding MGP_129S1SvImJ_T0090786.1 MGP_129S1SvImJ_G0034220.1 mouse_genomes_project 8 125838032 125854487 + Zfpm1 protein_coding processed_transcript MGP_129S1SvImJ_T0090787.1 MGP_129S1SvImJ_G0034220.1 mouse_genomes_project 8 125864273 125865606 + Zfpm1 protein_coding processed_transcript MGP_129S1SvImJ_T0090788.1 MGP_129S1SvImJ_G0034220.1 mouse_genomes_project 8 125864361 125866338 + MGP_129S1SvImJ_P0090788 Zfpm1 protein_coding protein_coding MGP_129S1SvImJ_T0010996.1 MGP_129S1SvImJ_G0009112.1 mouse_genomes_project 8 72044362 72044422 - Mir6769b miRNA miRNA MGP_129S1SvImJ_T0091009.1 MGP_129S1SvImJ_G0034289.1 mouse_genomes_project 8 129537280 129690231 - MGP_129S1SvImJ_P0091009 Pcnx2 protein_coding protein_coding MGP_129S1SvImJ_T0091010.1 MGP_129S1SvImJ_G0034289.1 mouse_genomes_project 8 129537281 129630635 - Pcnx2 protein_coding retained_intron MGP_129S1SvImJ_T0091011.1 MGP_129S1SvImJ_G0034289.1 mouse_genomes_project 8 129537283 129559946 - Pcnx2 protein_coding retained_intron MGP_129S1SvImJ_T0091012.1 MGP_129S1SvImJ_G0034289.1 mouse_genomes_project 8 129615617 129619041 - Pcnx2 protein_coding retained_intron MGP_129S1SvImJ_T0091013.1 MGP_129S1SvImJ_G0034289.1 mouse_genomes_project 8 129628391 129690231 - MGP_129S1SvImJ_P0091013 Pcnx2 protein_coding protein_coding MGP_129S1SvImJ_T0091014.1 MGP_129S1SvImJ_G0034289.1 mouse_genomes_project 8 129651921 129690189 - Pcnx2 protein_coding processed_transcript MGP_129S1SvImJ_T0090149.1 MGP_129S1SvImJ_G0034010.1 mouse_genomes_project 8 106555714 106581807 - MGP_129S1SvImJ_P0090149 Dync1li2 protein_coding protein_coding MGP_129S1SvImJ_T0089278.1 MGP_129S1SvImJ_G0033735.1 mouse_genomes_project 8 71220719 71233468 + MGP_129S1SvImJ_P0089278 Map1s protein_coding protein_coding MGP_129S1SvImJ_T0088250.1 MGP_129S1SvImJ_G0033398.1 mouse_genomes_project 8 12332871 12429496 + MGP_129S1SvImJ_P0088250 Arhgef10 protein_coding protein_coding MGP_129S1SvImJ_T0088251.1 MGP_129S1SvImJ_G0033398.1 mouse_genomes_project 8 12332925 12351183 + Arhgef10 protein_coding retained_intron MGP_129S1SvImJ_T0088252.1 MGP_129S1SvImJ_G0033398.1 mouse_genomes_project 8 12332932 12383404 + MGP_129S1SvImJ_P0088252 Arhgef10 protein_coding protein_coding MGP_129S1SvImJ_T0088253.1 MGP_129S1SvImJ_G0033398.1 mouse_genomes_project 8 12332946 12429496 + MGP_129S1SvImJ_P0088253 Arhgef10 protein_coding protein_coding MGP_129S1SvImJ_T0088254.1 MGP_129S1SvImJ_G0033398.1 mouse_genomes_project 8 12368213 12429493 + MGP_129S1SvImJ_P0088254 Arhgef10 protein_coding protein_coding MGP_129S1SvImJ_T0088255.1 MGP_129S1SvImJ_G0033398.1 mouse_genomes_project 8 12417757 12418518 + Arhgef10 protein_coding processed_transcript MGP_129S1SvImJ_T0088256.1 MGP_129S1SvImJ_G0033398.1 mouse_genomes_project 8 12423399 12429485 + Arhgef10 protein_coding processed_transcript MGP_129S1SvImJ_T0088500.1 MGP_129S1SvImJ_G0033495.1 mouse_genomes_project 8 24113607 24214464 - MGP_129S1SvImJ_P0088500 Hook3 protein_coding protein_coding MGP_129S1SvImJ_T0088501.1 MGP_129S1SvImJ_G0033495.1 mouse_genomes_project 8 24130275 24163075 - MGP_129S1SvImJ_P0088501 Hook3 protein_coding protein_coding MGP_129S1SvImJ_T0088502.1 MGP_129S1SvImJ_G0033495.1 mouse_genomes_project 8 24130284 24138014 - Hook3 protein_coding retained_intron MGP_129S1SvImJ_T0088042.1 MGP_129S1SvImJ_G0033332.1 mouse_genomes_project 8 1245126 1261232 - Timm44 protein_coding retained_intron MGP_129S1SvImJ_T0088043.1 MGP_129S1SvImJ_G0033332.1 mouse_genomes_project 8 1245126 1261260 - MGP_129S1SvImJ_P0088043 Timm44 protein_coding protein_coding MGP_129S1SvImJ_T0088044.1 MGP_129S1SvImJ_G0033332.1 mouse_genomes_project 8 1245144 1261218 - MGP_129S1SvImJ_P0088044 Timm44 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088045.1 MGP_129S1SvImJ_G0033332.1 mouse_genomes_project 8 1245379 1246131 - Timm44 protein_coding retained_intron MGP_129S1SvImJ_T0088046.1 MGP_129S1SvImJ_G0033332.1 mouse_genomes_project 8 1245495 1252395 - Timm44 protein_coding retained_intron MGP_129S1SvImJ_T0088047.1 MGP_129S1SvImJ_G0033332.1 mouse_genomes_project 8 1251462 1252332 - Timm44 protein_coding retained_intron MGP_129S1SvImJ_T0088048.1 MGP_129S1SvImJ_G0033332.1 mouse_genomes_project 8 1251643 1253012 - Timm44 protein_coding retained_intron MGP_129S1SvImJ_T0088049.1 MGP_129S1SvImJ_G0033332.1 mouse_genomes_project 8 1252693 1261229 - Timm44 protein_coding processed_transcript MGP_129S1SvImJ_T0088050.1 MGP_129S1SvImJ_G0033332.1 mouse_genomes_project 8 1252751 1261220 - Timm44 protein_coding retained_intron MGP_129S1SvImJ_T0090591.1 MGP_129S1SvImJ_G0034167.1 mouse_genomes_project 8 120063226 120080207 + MGP_129S1SvImJ_P0090591 Atmin protein_coding protein_coding MGP_129S1SvImJ_T0090833.1 MGP_129S1SvImJ_G0034236.1 mouse_genomes_project 8 126194037 126269610 - MGP_129S1SvImJ_P0090833 Cbfa2t3 protein_coding protein_coding MGP_129S1SvImJ_T0090834.1 MGP_129S1SvImJ_G0034236.1 mouse_genomes_project 8 126194764 126246887 - MGP_129S1SvImJ_P0090834 Cbfa2t3 protein_coding protein_coding MGP_129S1SvImJ_T0090835.1 MGP_129S1SvImJ_G0034236.1 mouse_genomes_project 8 126195238 126246990 - MGP_129S1SvImJ_P0090835 Cbfa2t3 protein_coding protein_coding MGP_129S1SvImJ_T0090836.1 MGP_129S1SvImJ_G0034236.1 mouse_genomes_project 8 126205888 126247509 - MGP_129S1SvImJ_P0090836 Cbfa2t3 protein_coding protein_coding MGP_129S1SvImJ_T0090837.1 MGP_129S1SvImJ_G0034236.1 mouse_genomes_project 8 126205892 126215372 - Cbfa2t3 protein_coding processed_transcript MGP_129S1SvImJ_T0090838.1 MGP_129S1SvImJ_G0034236.1 mouse_genomes_project 8 126209878 126246926 - Cbfa2t3 protein_coding processed_transcript MGP_129S1SvImJ_T0090839.1 MGP_129S1SvImJ_G0034236.1 mouse_genomes_project 8 126218917 126269403 - Cbfa2t3 protein_coding retained_intron MGP_129S1SvImJ_T0016003.1 MGP_129S1SvImJ_G0014092.1 mouse_genomes_project 8 83376861 83377819 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009103.1 MGP_129S1SvImJ_G0007320.1 mouse_genomes_project 8 34202182 34208361 - Gm16793 lincRNA lincRNA MGP_129S1SvImJ_T0100132.1 MGP_129S1SvImJ_G0038199.1 mouse_genomes_project 8 93310699 93310803 + Gm24254 snRNA snRNA MGP_129S1SvImJ_T0090540.1 MGP_129S1SvImJ_G0034148.1 mouse_genomes_project 8 114714967 114741018 - MGP_129S1SvImJ_P0090540 Chst5 protein_coding protein_coding MGP_129S1SvImJ_T0005382.1 MGP_129S1SvImJ_G0004562.1 mouse_genomes_project 8 66445995 66448908 - Gm15354 antisense antisense MGP_129S1SvImJ_T0090114.1 MGP_129S1SvImJ_G0033993.1 mouse_genomes_project 8 97225645 97322947 - MGP_129S1SvImJ_P0090114 Cnot1 protein_coding protein_coding MGP_129S1SvImJ_T0090115.1 MGP_129S1SvImJ_G0033993.1 mouse_genomes_project 8 97225645 97322947 - MGP_129S1SvImJ_P0090115 Cnot1 protein_coding protein_coding MGP_129S1SvImJ_T0018476.1 MGP_129S1SvImJ_G0015704.1 mouse_genomes_project 8 1142528 1191845 - 4932443L11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018477.1 MGP_129S1SvImJ_G0015704.1 mouse_genomes_project 8 1158134 1191250 - 4932443L11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0009131.1 MGP_129S1SvImJ_G0007345.1 mouse_genomes_project 8 85067310 85073525 - Gm26887 lincRNA lincRNA MGP_129S1SvImJ_T0090474.1 MGP_129S1SvImJ_G0034131.1 mouse_genomes_project 8 113620818 113678501 + MGP_129S1SvImJ_P0090474 St3gal2 protein_coding protein_coding MGP_129S1SvImJ_T0090475.1 MGP_129S1SvImJ_G0034131.1 mouse_genomes_project 8 113620818 113675844 + MGP_129S1SvImJ_P0090475 St3gal2 protein_coding protein_coding MGP_129S1SvImJ_T0090476.1 MGP_129S1SvImJ_G0034131.1 mouse_genomes_project 8 113620854 113663008 + St3gal2 protein_coding processed_transcript MGP_129S1SvImJ_T0090477.1 MGP_129S1SvImJ_G0034131.1 mouse_genomes_project 8 113635444 113663207 + St3gal2 protein_coding processed_transcript MGP_129S1SvImJ_T0090478.1 MGP_129S1SvImJ_G0034131.1 mouse_genomes_project 8 113644426 113663033 + St3gal2 protein_coding processed_transcript MGP_129S1SvImJ_T0002366.1 MGP_129S1SvImJ_G0002276.1 mouse_genomes_project 8 124620560 124621238 + TEC TEC MGP_129S1SvImJ_T0088185.1 MGP_129S1SvImJ_G0033375.1 mouse_genomes_project 8 10555462 10592811 - MGP_129S1SvImJ_P0088185 protein_coding protein_coding MGP_129S1SvImJ_T0088186.1 MGP_129S1SvImJ_G0033375.1 mouse_genomes_project 8 10569446 10592811 - MGP_129S1SvImJ_P0088186 protein_coding protein_coding MGP_129S1SvImJ_T0088187.1 MGP_129S1SvImJ_G0033375.1 mouse_genomes_project 8 10576624 10577448 - protein_coding retained_intron MGP_129S1SvImJ_T0088188.1 MGP_129S1SvImJ_G0033375.1 mouse_genomes_project 8 10576872 10592720 - MGP_129S1SvImJ_P0088188 protein_coding protein_coding MGP_129S1SvImJ_T0088189.1 MGP_129S1SvImJ_G0033375.1 mouse_genomes_project 8 10577004 10592745 - MGP_129S1SvImJ_P0088189 protein_coding protein_coding MGP_129S1SvImJ_T0010989.1 MGP_129S1SvImJ_G0009105.1 mouse_genomes_project 8 64522257 64522367 - Mir710 miRNA miRNA MGP_129S1SvImJ_T0087960.1 MGP_129S1SvImJ_G0033309.1 mouse_genomes_project 8 553475 566121 - Xab2 protein_coding retained_intron MGP_129S1SvImJ_T0087961.1 MGP_129S1SvImJ_G0033309.1 mouse_genomes_project 8 555141 566132 - MGP_129S1SvImJ_P0087961 Xab2 protein_coding protein_coding MGP_129S1SvImJ_T0087962.1 MGP_129S1SvImJ_G0033309.1 mouse_genomes_project 8 555144 566118 - Xab2 protein_coding retained_intron MGP_129S1SvImJ_T0087963.1 MGP_129S1SvImJ_G0033309.1 mouse_genomes_project 8 559367 566086 - MGP_129S1SvImJ_P0087963 Xab2 protein_coding protein_coding MGP_129S1SvImJ_T0087964.1 MGP_129S1SvImJ_G0033309.1 mouse_genomes_project 8 561040 566098 - MGP_129S1SvImJ_P0087964 Xab2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0009104.1 MGP_129S1SvImJ_G0007321.1 mouse_genomes_project 8 39681266 39684493 - Gm26584 lincRNA lincRNA MGP_129S1SvImJ_T0002361.1 MGP_129S1SvImJ_G0002271.1 mouse_genomes_project 8 111281702 111286910 + TEC TEC MGP_129S1SvImJ_T0009183.1 MGP_129S1SvImJ_G0007379.1 mouse_genomes_project 8 108937375 108948021 + 1110028F18Rik lincRNA lincRNA MGP_129S1SvImJ_T0089245.1 MGP_129S1SvImJ_G0033717.1 mouse_genomes_project 8 70926737 70942069 - MGP_129S1SvImJ_P0089245 Pgpep1 protein_coding protein_coding MGP_129S1SvImJ_T0089901.1 MGP_129S1SvImJ_G0033920.1 mouse_genomes_project 8 89605482 89685293 + MGP_129S1SvImJ_P0089901 Nkd1 protein_coding protein_coding MGP_129S1SvImJ_T0089902.1 MGP_129S1SvImJ_G0033920.1 mouse_genomes_project 8 89611784 89685293 + MGP_129S1SvImJ_P0089902 Nkd1 protein_coding protein_coding MGP_129S1SvImJ_T0089493.1 MGP_129S1SvImJ_G0033800.1 mouse_genomes_project 8 77823483 78101975 - MGP_129S1SvImJ_P0089493 Arhgap10 protein_coding protein_coding MGP_129S1SvImJ_T0089252.1 MGP_129S1SvImJ_G0033722.1 mouse_genomes_project 8 71014602 71044113 + MGP_129S1SvImJ_P0089252 Pde4c protein_coding protein_coding MGP_129S1SvImJ_T0089253.1 MGP_129S1SvImJ_G0033722.1 mouse_genomes_project 8 71014946 71050451 + MGP_129S1SvImJ_P0089253 Pde4c protein_coding protein_coding MGP_129S1SvImJ_T0089254.1 MGP_129S1SvImJ_G0033722.1 mouse_genomes_project 8 71014947 71050438 + MGP_129S1SvImJ_P0089254 Pde4c protein_coding protein_coding MGP_129S1SvImJ_T0089255.1 MGP_129S1SvImJ_G0033722.1 mouse_genomes_project 8 71023749 71043960 + Pde4c protein_coding processed_transcript MGP_129S1SvImJ_T0089256.1 MGP_129S1SvImJ_G0033722.1 mouse_genomes_project 8 71041145 71048531 + Pde4c protein_coding retained_intron MGP_129S1SvImJ_T0089257.1 MGP_129S1SvImJ_G0033722.1 mouse_genomes_project 8 71045949 71048871 + Pde4c protein_coding retained_intron MGP_129S1SvImJ_T0010968.1 MGP_129S1SvImJ_G0009084.1 mouse_genomes_project 8 9964794 9964898 + Gm26483 miRNA miRNA MGP_129S1SvImJ_T0009127.1 MGP_129S1SvImJ_G0007342.1 mouse_genomes_project 8 81757753 81786514 + lincRNA lincRNA MGP_129S1SvImJ_T0011748.1 MGP_129S1SvImJ_G0009864.1 mouse_genomes_project 8 113166042 113166333 + Gm22701 misc_RNA misc_RNA MGP_129S1SvImJ_T0009188.1 MGP_129S1SvImJ_G0007382.1 mouse_genomes_project 8 113554957 113643837 - Gm26816 lincRNA lincRNA MGP_129S1SvImJ_T0009133.1 MGP_129S1SvImJ_G0007347.1 mouse_genomes_project 8 85572511 85579230 + Gm26664 lincRNA lincRNA MGP_129S1SvImJ_T0090583.1 MGP_129S1SvImJ_G0034164.1 mouse_genomes_project 8 119661794 119838219 - MGP_129S1SvImJ_P0090583 Cdyl2 protein_coding protein_coding MGP_129S1SvImJ_T0090636.1 MGP_129S1SvImJ_G0034186.1 mouse_genomes_project 8 122907460 122935495 + MGP_129S1SvImJ_P0090636 Dnaaf1 protein_coding protein_coding MGP_129S1SvImJ_T0090637.1 MGP_129S1SvImJ_G0034186.1 mouse_genomes_project 8 122907552 122934706 + MGP_129S1SvImJ_P0090637 Dnaaf1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0098656.1 MGP_129S1SvImJ_G0036741.1 mouse_genomes_project 8 118068364 118068464 - Gm22556 rRNA rRNA MGP_129S1SvImJ_T0089903.1 MGP_129S1SvImJ_G0033921.1 mouse_genomes_project 8 89718619 89728020 - MGP_129S1SvImJ_P0089903 Snx20 protein_coding protein_coding MGP_129S1SvImJ_T0100113.1 MGP_129S1SvImJ_G0038180.1 mouse_genomes_project 8 45371186 45371283 + Gm24669 snRNA snRNA MGP_129S1SvImJ_T0088665.1 MGP_129S1SvImJ_G0033556.1 mouse_genomes_project 8 39482514 39489544 + MGP_129S1SvImJ_P0088665 Adam24 protein_coding protein_coding MGP_129S1SvImJ_T0011051.1 MGP_129S1SvImJ_G0009167.1 mouse_genomes_project 8 127674542 127674624 + Mir1967 miRNA miRNA MGP_129S1SvImJ_T0005401.1 MGP_129S1SvImJ_G0004578.1 mouse_genomes_project 8 107858462 107860823 + Gm38250 antisense antisense MGP_129S1SvImJ_T0005402.1 MGP_129S1SvImJ_G0004578.1 mouse_genomes_project 8 107858489 107872488 + Gm38250 antisense antisense MGP_129S1SvImJ_T0089095.1 MGP_129S1SvImJ_G0033680.1 mouse_genomes_project 8 70109510 70116826 - MGP_129S1SvImJ_P0089095 Cilp2 protein_coding protein_coding MGP_129S1SvImJ_T0090878.1 MGP_129S1SvImJ_G0034249.1 mouse_genomes_project 8 126844730 126857397 - Vps9d1 protein_coding retained_intron MGP_129S1SvImJ_T0090879.1 MGP_129S1SvImJ_G0034249.1 mouse_genomes_project 8 126844730 126857351 - MGP_129S1SvImJ_P0090879 Vps9d1 protein_coding protein_coding MGP_129S1SvImJ_T0090880.1 MGP_129S1SvImJ_G0034249.1 mouse_genomes_project 8 126844730 126857538 - MGP_129S1SvImJ_P0090880 Vps9d1 protein_coding protein_coding MGP_129S1SvImJ_T0090881.1 MGP_129S1SvImJ_G0034249.1 mouse_genomes_project 8 126844732 126857338 - Vps9d1 protein_coding retained_intron MGP_129S1SvImJ_T0090882.1 MGP_129S1SvImJ_G0034249.1 mouse_genomes_project 8 126844732 126857284 - MGP_129S1SvImJ_P0090882 Vps9d1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090883.1 MGP_129S1SvImJ_G0034249.1 mouse_genomes_project 8 126844733 126857267 - MGP_129S1SvImJ_P0090883 Vps9d1 protein_coding protein_coding MGP_129S1SvImJ_T0090884.1 MGP_129S1SvImJ_G0034249.1 mouse_genomes_project 8 126847321 126857280 - Vps9d1 protein_coding retained_intron MGP_129S1SvImJ_T0090885.1 MGP_129S1SvImJ_G0034249.1 mouse_genomes_project 8 126847517 126849305 - Vps9d1 protein_coding processed_transcript MGP_129S1SvImJ_T0090886.1 MGP_129S1SvImJ_G0034249.1 mouse_genomes_project 8 126848890 126850371 - Vps9d1 protein_coding processed_transcript MGP_129S1SvImJ_T0090887.1 MGP_129S1SvImJ_G0034249.1 mouse_genomes_project 8 126849231 126850388 - Vps9d1 protein_coding retained_intron MGP_129S1SvImJ_T0090888.1 MGP_129S1SvImJ_G0034249.1 mouse_genomes_project 8 126850927 126851358 - Vps9d1 protein_coding retained_intron MGP_129S1SvImJ_T0090889.1 MGP_129S1SvImJ_G0034249.1 mouse_genomes_project 8 126851202 126854235 - Vps9d1 protein_coding retained_intron MGP_129S1SvImJ_T0090890.1 MGP_129S1SvImJ_G0034249.1 mouse_genomes_project 8 126852075 126857225 - Vps9d1 protein_coding retained_intron MGP_129S1SvImJ_T0005365.1 MGP_129S1SvImJ_G0004548.1 mouse_genomes_project 8 24176417 24196133 + 1700047A11Rik antisense antisense MGP_129S1SvImJ_T0005366.1 MGP_129S1SvImJ_G0004548.1 mouse_genomes_project 8 24176424 24183087 + 1700047A11Rik antisense antisense MGP_129S1SvImJ_T0087939.1 MGP_129S1SvImJ_G0033302.1 mouse_genomes_project 8 362707 373391 - MGP_129S1SvImJ_P0087939 Pex11g protein_coding protein_coding MGP_129S1SvImJ_T0087940.1 MGP_129S1SvImJ_G0033302.1 mouse_genomes_project 8 362710 373356 - MGP_129S1SvImJ_P0087940 Pex11g protein_coding protein_coding MGP_129S1SvImJ_T0087941.1 MGP_129S1SvImJ_G0033302.1 mouse_genomes_project 8 368895 373381 - MGP_129S1SvImJ_P0087941 Pex11g protein_coding protein_coding MGP_129S1SvImJ_T0005422.1 MGP_129S1SvImJ_G0004596.1 mouse_genomes_project 8 125475079 125476051 - Gm27011 antisense antisense MGP_129S1SvImJ_T0009086.1 MGP_129S1SvImJ_G0007307.1 mouse_genomes_project 8 22408560 22426296 + Gm26714 lincRNA lincRNA MGP_129S1SvImJ_T0088833.1 MGP_129S1SvImJ_G0033601.1 mouse_genomes_project 8 46901201 46902957 + MGP_129S1SvImJ_P0088833 protein_coding protein_coding MGP_129S1SvImJ_T0089349.1 MGP_129S1SvImJ_G0033752.1 mouse_genomes_project 8 71956477 71961373 + MGP_129S1SvImJ_P0089349 Mvb12a protein_coding protein_coding MGP_129S1SvImJ_T0005418.1 MGP_129S1SvImJ_G0004593.1 mouse_genomes_project 8 125058865 125060225 + Gm27045 antisense antisense MGP_129S1SvImJ_T0090927.1 MGP_129S1SvImJ_G0034258.1 mouse_genomes_project 8 127110817 127121546 - MGP_129S1SvImJ_P0090927 Dbndd1 protein_coding protein_coding MGP_129S1SvImJ_T0090928.1 MGP_129S1SvImJ_G0034258.1 mouse_genomes_project 8 127111786 127121481 - MGP_129S1SvImJ_P0090928 Dbndd1 protein_coding protein_coding MGP_129S1SvImJ_T0090929.1 MGP_129S1SvImJ_G0034258.1 mouse_genomes_project 8 127111786 127121554 - MGP_129S1SvImJ_P0090929 Dbndd1 protein_coding protein_coding MGP_129S1SvImJ_T0088398.1 MGP_129S1SvImJ_G0033467.1 mouse_genomes_project 8 21571497 21855604 + MGP_129S1SvImJ_P0088398 Zmat4 protein_coding protein_coding MGP_129S1SvImJ_T0088399.1 MGP_129S1SvImJ_G0033467.1 mouse_genomes_project 8 21609027 22026339 + MGP_129S1SvImJ_P0088399 Zmat4 protein_coding protein_coding MGP_129S1SvImJ_T0088400.1 MGP_129S1SvImJ_G0033467.1 mouse_genomes_project 8 21609027 22124492 + MGP_129S1SvImJ_P0088400 Zmat4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088401.1 MGP_129S1SvImJ_G0033467.1 mouse_genomes_project 8 21643495 21752107 + MGP_129S1SvImJ_P0088401 Zmat4 protein_coding protein_coding MGP_129S1SvImJ_T0088402.1 MGP_129S1SvImJ_G0033467.1 mouse_genomes_project 8 21883146 21976428 + Zmat4 protein_coding retained_intron MGP_129S1SvImJ_T0101413.1 MGP_129S1SvImJ_G0039480.1 mouse_genomes_project 8 112454512 112454597 + Snord71 snoRNA snoRNA MGP_129S1SvImJ_T0088488.1 MGP_129S1SvImJ_G0033490.1 mouse_genomes_project 8 23888348 23910892 - MGP_129S1SvImJ_P0088488 Ash2l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088489.1 MGP_129S1SvImJ_G0033490.1 mouse_genomes_project 8 23888694 23910899 - MGP_129S1SvImJ_P0088489 Ash2l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088490.1 MGP_129S1SvImJ_G0033490.1 mouse_genomes_project 8 23889224 23910927 - MGP_129S1SvImJ_P0088490 Ash2l protein_coding protein_coding MGP_129S1SvImJ_T0088491.1 MGP_129S1SvImJ_G0033490.1 mouse_genomes_project 8 23894569 23895396 - Ash2l protein_coding retained_intron MGP_129S1SvImJ_T0088492.1 MGP_129S1SvImJ_G0033490.1 mouse_genomes_project 8 23894964 23901163 - Ash2l protein_coding retained_intron MGP_129S1SvImJ_T0088493.1 MGP_129S1SvImJ_G0033490.1 mouse_genomes_project 8 23898811 23900619 - Ash2l protein_coding processed_transcript MGP_129S1SvImJ_T0011047.1 MGP_129S1SvImJ_G0009163.1 mouse_genomes_project 8 125506448 125506511 + Mir7237 miRNA miRNA MGP_129S1SvImJ_T0011010.1 MGP_129S1SvImJ_G0009126.1 mouse_genomes_project 8 85084495 85084602 + Mir24-2 miRNA miRNA MGP_129S1SvImJ_T0101408.1 MGP_129S1SvImJ_G0039475.1 mouse_genomes_project 8 97266788 97266923 - Gm26265 snoRNA snoRNA MGP_129S1SvImJ_T0089262.1 MGP_129S1SvImJ_G0033726.1 mouse_genomes_project 8 71069122 71079813 - MGP_129S1SvImJ_P0089262 Pik3r2 protein_coding protein_coding MGP_129S1SvImJ_T0089263.1 MGP_129S1SvImJ_G0033726.1 mouse_genomes_project 8 71069407 71070335 - MGP_129S1SvImJ_P0089263 Pik3r2 protein_coding protein_coding MGP_129S1SvImJ_T0089264.1 MGP_129S1SvImJ_G0033726.1 mouse_genomes_project 8 71069586 71070611 - Pik3r2 protein_coding retained_intron MGP_129S1SvImJ_T0089265.1 MGP_129S1SvImJ_G0033726.1 mouse_genomes_project 8 71072939 71076250 - Pik3r2 protein_coding retained_intron MGP_129S1SvImJ_T0089266.1 MGP_129S1SvImJ_G0033726.1 mouse_genomes_project 8 71073319 71077787 - MGP_129S1SvImJ_P0089266 Pik3r2 protein_coding protein_coding MGP_129S1SvImJ_T0089267.1 MGP_129S1SvImJ_G0033726.1 mouse_genomes_project 8 71078108 71079779 - Pik3r2 protein_coding processed_transcript MGP_129S1SvImJ_T0091020.1 MGP_129S1SvImJ_G0034295.1 mouse_genomes_project 8 130252983 130306345 - MGP_129S1SvImJ_P0091020 Tarbp1 protein_coding protein_coding MGP_129S1SvImJ_T0009111.1 MGP_129S1SvImJ_G0007328.1 mouse_genomes_project 8 57216744 57242562 + 2500002B13Rik lincRNA lincRNA MGP_129S1SvImJ_T0090941.1 MGP_129S1SvImJ_G0034267.1 mouse_genomes_project 8 127643341 127672291 - MGP_129S1SvImJ_P0090941 Taf5l protein_coding protein_coding MGP_129S1SvImJ_T0090942.1 MGP_129S1SvImJ_G0034267.1 mouse_genomes_project 8 127643341 127670386 - MGP_129S1SvImJ_P0090942 Taf5l protein_coding protein_coding MGP_129S1SvImJ_T0088938.1 MGP_129S1SvImJ_G0033635.1 mouse_genomes_project 8 61408587 61428252 + MGP_129S1SvImJ_P0088938 Cbr4 protein_coding protein_coding MGP_129S1SvImJ_T0088939.1 MGP_129S1SvImJ_G0033635.1 mouse_genomes_project 8 61408588 61412441 + MGP_129S1SvImJ_P0088939 Cbr4 protein_coding protein_coding MGP_129S1SvImJ_T0088940.1 MGP_129S1SvImJ_G0033635.1 mouse_genomes_project 8 61408608 61412759 + Cbr4 protein_coding retained_intron MGP_129S1SvImJ_T0088941.1 MGP_129S1SvImJ_G0033635.1 mouse_genomes_project 8 61408622 61428099 + Cbr4 protein_coding retained_intron MGP_129S1SvImJ_T0088942.1 MGP_129S1SvImJ_G0033635.1 mouse_genomes_project 8 61412263 61428099 + Cbr4 protein_coding retained_intron MGP_129S1SvImJ_T0088943.1 MGP_129S1SvImJ_G0033635.1 mouse_genomes_project 8 61419598 61428159 + Cbr4 protein_coding retained_intron MGP_129S1SvImJ_T0089142.1 MGP_129S1SvImJ_G0033695.1 mouse_genomes_project 8 70441583 70473669 - Slc25a42 protein_coding retained_intron MGP_129S1SvImJ_T0089143.1 MGP_129S1SvImJ_G0033695.1 mouse_genomes_project 8 70441583 70473620 - MGP_129S1SvImJ_P0089143 Slc25a42 protein_coding protein_coding MGP_129S1SvImJ_T0089144.1 MGP_129S1SvImJ_G0033695.1 mouse_genomes_project 8 70441583 70473669 - MGP_129S1SvImJ_P0089144 Slc25a42 protein_coding protein_coding MGP_129S1SvImJ_T0089145.1 MGP_129S1SvImJ_G0033695.1 mouse_genomes_project 8 70444875 70473669 - Slc25a42 protein_coding retained_intron MGP_129S1SvImJ_T0089146.1 MGP_129S1SvImJ_G0033695.1 mouse_genomes_project 8 70449555 70473669 - Slc25a42 protein_coding retained_intron MGP_129S1SvImJ_T0101416.1 MGP_129S1SvImJ_G0039483.1 mouse_genomes_project 8 113624012 113624160 + Gm26132 snoRNA snoRNA MGP_129S1SvImJ_T0088894.1 MGP_129S1SvImJ_G0033625.1 mouse_genomes_project 8 57261957 57400054 - MGP_129S1SvImJ_P0088894 Galnt7 protein_coding protein_coding MGP_129S1SvImJ_T0088895.1 MGP_129S1SvImJ_G0033625.1 mouse_genomes_project 8 57262829 57400054 - MGP_129S1SvImJ_P0088895 Galnt7 protein_coding protein_coding MGP_129S1SvImJ_T0088896.1 MGP_129S1SvImJ_G0033625.1 mouse_genomes_project 8 57264153 57282583 - Galnt7 protein_coding processed_transcript MGP_129S1SvImJ_T0088897.1 MGP_129S1SvImJ_G0033625.1 mouse_genomes_project 8 57286124 57400054 - Galnt7 protein_coding retained_intron MGP_129S1SvImJ_T0088658.1 MGP_129S1SvImJ_G0033554.1 mouse_genomes_project 8 39314304 39355467 + MGP_129S1SvImJ_P0088658 Vps37a protein_coding protein_coding MGP_129S1SvImJ_T0088075.1 MGP_129S1SvImJ_G0033341.1 mouse_genomes_project 8 5690611 5733731 - MGP_129S1SvImJ_P0088075 Efnb2 protein_coding protein_coding MGP_129S1SvImJ_T0088076.1 MGP_129S1SvImJ_G0033341.1 mouse_genomes_project 8 5693774 5712337 - MGP_129S1SvImJ_P0088076 Efnb2 protein_coding protein_coding MGP_129S1SvImJ_T0088999.1 MGP_129S1SvImJ_G0033651.1 mouse_genomes_project 8 66538237 66551411 - Tma16 protein_coding retained_intron MGP_129S1SvImJ_T0089000.1 MGP_129S1SvImJ_G0033651.1 mouse_genomes_project 8 66541271 66551433 - MGP_129S1SvImJ_P0089000 Tma16 protein_coding protein_coding MGP_129S1SvImJ_T0089001.1 MGP_129S1SvImJ_G0033651.1 mouse_genomes_project 8 66547307 66551444 - Tma16 protein_coding retained_intron MGP_129S1SvImJ_T0005411.1 MGP_129S1SvImJ_G0004586.1 mouse_genomes_project 8 117310736 117323073 - 4933408N05Rik antisense antisense MGP_129S1SvImJ_T0101378.1 MGP_129S1SvImJ_G0039445.1 mouse_genomes_project 8 37783516 37783648 - Gm23128 snoRNA snoRNA MGP_129S1SvImJ_T0089565.1 MGP_129S1SvImJ_G0033826.1 mouse_genomes_project 8 83954228 83955322 - MGP_129S1SvImJ_P0089565 Gm10645 protein_coding protein_coding MGP_129S1SvImJ_T0009134.1 MGP_129S1SvImJ_G0007348.1 mouse_genomes_project 8 87870647 87871526 + 2010110E17Rik lincRNA lincRNA MGP_129S1SvImJ_T0087991.1 MGP_129S1SvImJ_G0033315.1 mouse_genomes_project 8 623358 628225 + MGP_129S1SvImJ_P0087991 Trappc5 protein_coding protein_coding MGP_129S1SvImJ_T0089570.1 MGP_129S1SvImJ_G0033829.1 mouse_genomes_project 8 84111616 84135595 - MGP_129S1SvImJ_P0089570 Elmod2 protein_coding protein_coding MGP_129S1SvImJ_T0089571.1 MGP_129S1SvImJ_G0033829.1 mouse_genomes_project 8 84112006 84135595 - MGP_129S1SvImJ_P0089571 Elmod2 protein_coding protein_coding MGP_129S1SvImJ_T0089572.1 MGP_129S1SvImJ_G0033829.1 mouse_genomes_project 8 84114704 84124640 - Elmod2 protein_coding retained_intron MGP_129S1SvImJ_T0089573.1 MGP_129S1SvImJ_G0033829.1 mouse_genomes_project 8 84116980 84134557 - Elmod2 protein_coding retained_intron MGP_129S1SvImJ_T0089574.1 MGP_129S1SvImJ_G0033829.1 mouse_genomes_project 8 84124231 84135513 - Elmod2 protein_coding retained_intron MGP_129S1SvImJ_T0089575.1 MGP_129S1SvImJ_G0033829.1 mouse_genomes_project 8 84128708 84135513 - Elmod2 protein_coding retained_intron MGP_129S1SvImJ_T0009194.1 MGP_129S1SvImJ_G0007388.1 mouse_genomes_project 8 124343091 124345365 + Gm26878 lincRNA lincRNA MGP_129S1SvImJ_T0015986.1 MGP_129S1SvImJ_G0014075.1 mouse_genomes_project 8 61287182 61287660 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0089779.1 MGP_129S1SvImJ_G0033884.1 mouse_genomes_project 8 85920943 85922784 - MGP_129S1SvImJ_P0089779 Junb protein_coding protein_coding MGP_129S1SvImJ_T0088803.1 MGP_129S1SvImJ_G0033590.1 mouse_genomes_project 8 45679621 45724941 - MGP_129S1SvImJ_P0088803 Primpol protein_coding protein_coding MGP_129S1SvImJ_T0088804.1 MGP_129S1SvImJ_G0033590.1 mouse_genomes_project 8 45680204 45724941 - Primpol protein_coding retained_intron MGP_129S1SvImJ_T0088805.1 MGP_129S1SvImJ_G0033590.1 mouse_genomes_project 8 45690687 45700472 - Primpol protein_coding processed_transcript MGP_129S1SvImJ_T0088806.1 MGP_129S1SvImJ_G0033590.1 mouse_genomes_project 8 45712896 45720756 - MGP_129S1SvImJ_P0088806 Primpol protein_coding protein_coding MGP_129S1SvImJ_T0088807.1 MGP_129S1SvImJ_G0033590.1 mouse_genomes_project 8 45718518 45724953 - Primpol protein_coding retained_intron MGP_129S1SvImJ_T0088785.1 MGP_129S1SvImJ_G0033586.1 mouse_genomes_project 8 45302684 45307172 - MGP_129S1SvImJ_P0088785 Slc25a4 protein_coding protein_coding MGP_129S1SvImJ_T0088786.1 MGP_129S1SvImJ_G0033586.1 mouse_genomes_project 8 45303857 45306918 - Slc25a4 protein_coding retained_intron MGP_129S1SvImJ_T0089839.1 MGP_129S1SvImJ_G0033906.1 mouse_genomes_project 8 86807009 86852971 + Phkb protein_coding processed_transcript MGP_129S1SvImJ_T0089840.1 MGP_129S1SvImJ_G0033906.1 mouse_genomes_project 8 86807041 86901133 + MGP_129S1SvImJ_P0089840 Phkb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089841.1 MGP_129S1SvImJ_G0033906.1 mouse_genomes_project 8 86807052 87036364 + MGP_129S1SvImJ_P0089841 Phkb protein_coding protein_coding MGP_129S1SvImJ_T0089842.1 MGP_129S1SvImJ_G0033906.1 mouse_genomes_project 8 86807058 86883336 + Phkb protein_coding processed_transcript MGP_129S1SvImJ_T0089843.1 MGP_129S1SvImJ_G0033906.1 mouse_genomes_project 8 86807066 86883070 + MGP_129S1SvImJ_P0089843 Phkb protein_coding protein_coding MGP_129S1SvImJ_T0089844.1 MGP_129S1SvImJ_G0033906.1 mouse_genomes_project 8 86808837 86865179 + MGP_129S1SvImJ_P0089844 Phkb protein_coding protein_coding MGP_129S1SvImJ_T0089845.1 MGP_129S1SvImJ_G0033906.1 mouse_genomes_project 8 86809101 86853058 + MGP_129S1SvImJ_P0089845 Phkb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089846.1 MGP_129S1SvImJ_G0033906.1 mouse_genomes_project 8 86992213 87005550 + MGP_129S1SvImJ_P0089846 Phkb protein_coding protein_coding MGP_129S1SvImJ_T0089847.1 MGP_129S1SvImJ_G0033906.1 mouse_genomes_project 8 87010802 87035629 + Phkb protein_coding processed_transcript MGP_129S1SvImJ_T0090859.1 MGP_129S1SvImJ_G0034242.1 mouse_genomes_project 8 126710786 126728613 + Cpne7 protein_coding retained_intron MGP_129S1SvImJ_T0090860.1 MGP_129S1SvImJ_G0034242.1 mouse_genomes_project 8 126710790 126728615 + MGP_129S1SvImJ_P0090860 Cpne7 protein_coding protein_coding MGP_129S1SvImJ_T0090861.1 MGP_129S1SvImJ_G0034242.1 mouse_genomes_project 8 126710859 126728615 + Cpne7 protein_coding retained_intron MGP_129S1SvImJ_T0090862.1 MGP_129S1SvImJ_G0034242.1 mouse_genomes_project 8 126719939 126720796 + Cpne7 protein_coding processed_transcript MGP_129S1SvImJ_T0090863.1 MGP_129S1SvImJ_G0034242.1 mouse_genomes_project 8 126722040 126725301 + Cpne7 protein_coding retained_intron MGP_129S1SvImJ_T0087946.1 MGP_129S1SvImJ_G0033305.1 mouse_genomes_project 8 417488 435979 + MGP_129S1SvImJ_P0087946 Mcoln1 protein_coding protein_coding MGP_129S1SvImJ_T0087947.1 MGP_129S1SvImJ_G0033305.1 mouse_genomes_project 8 417535 427642 + MGP_129S1SvImJ_P0087947 Mcoln1 protein_coding protein_coding MGP_129S1SvImJ_T0087948.1 MGP_129S1SvImJ_G0033305.1 mouse_genomes_project 8 426480 435979 + Mcoln1 protein_coding retained_intron MGP_129S1SvImJ_T0087949.1 MGP_129S1SvImJ_G0033305.1 mouse_genomes_project 8 431360 433705 + Mcoln1 protein_coding retained_intron MGP_129S1SvImJ_T0087950.1 MGP_129S1SvImJ_G0033305.1 mouse_genomes_project 8 432289 433490 + Mcoln1 protein_coding retained_intron MGP_129S1SvImJ_T0087951.1 MGP_129S1SvImJ_G0033305.1 mouse_genomes_project 8 433364 435971 + Mcoln1 protein_coding retained_intron MGP_129S1SvImJ_T0087952.1 MGP_129S1SvImJ_G0033305.1 mouse_genomes_project 8 435308 435979 + Mcoln1 protein_coding retained_intron MGP_129S1SvImJ_T0088176.1 MGP_129S1SvImJ_G0033372.1 mouse_genomes_project 8 10421765 10464907 + MGP_129S1SvImJ_P0088176 Cul4a protein_coding protein_coding MGP_129S1SvImJ_T0088177.1 MGP_129S1SvImJ_G0033372.1 mouse_genomes_project 8 10421884 10440006 + MGP_129S1SvImJ_P0088177 Cul4a protein_coding protein_coding MGP_129S1SvImJ_T0088178.1 MGP_129S1SvImJ_G0033372.1 mouse_genomes_project 8 10422080 10437534 + Cul4a protein_coding retained_intron MGP_129S1SvImJ_T0088179.1 MGP_129S1SvImJ_G0033372.1 mouse_genomes_project 8 10439308 10464329 + MGP_129S1SvImJ_P0088179 Cul4a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088180.1 MGP_129S1SvImJ_G0033372.1 mouse_genomes_project 8 10456005 10458761 + Cul4a protein_coding retained_intron MGP_129S1SvImJ_T0088181.1 MGP_129S1SvImJ_G0033372.1 mouse_genomes_project 8 10456469 10462724 + Cul4a protein_coding processed_transcript MGP_129S1SvImJ_T0088182.1 MGP_129S1SvImJ_G0033372.1 mouse_genomes_project 8 10460399 10464907 + Cul4a protein_coding retained_intron MGP_129S1SvImJ_T0009211.1 MGP_129S1SvImJ_G0007400.1 mouse_genomes_project 8 126836515 126844734 + 4933417D19Rik lincRNA lincRNA MGP_129S1SvImJ_T0088862.1 MGP_129S1SvImJ_G0033613.1 mouse_genomes_project 8 54266314 54276268 + MGP_129S1SvImJ_P0088862 Spata4 protein_coding protein_coding MGP_129S1SvImJ_T0005367.1 MGP_129S1SvImJ_G0004549.1 mouse_genomes_project 8 25219711 25220377 - Proscos antisense antisense MGP_129S1SvImJ_T0005368.1 MGP_129S1SvImJ_G0004549.1 mouse_genomes_project 8 25219716 25220332 - Proscos antisense antisense MGP_129S1SvImJ_T0009159.1 MGP_129S1SvImJ_G0007364.1 mouse_genomes_project 8 93131887 93139081 + Gm28511 lincRNA lincRNA MGP_129S1SvImJ_T0100147.1 MGP_129S1SvImJ_G0038214.1 mouse_genomes_project 8 126559714 126559821 - Gm24445 snRNA snRNA MGP_129S1SvImJ_T0090036.1 MGP_129S1SvImJ_G0033968.1 mouse_genomes_project 8 96209146 96216077 + Cx3cl1 protein_coding processed_transcript MGP_129S1SvImJ_T0090037.1 MGP_129S1SvImJ_G0033968.1 mouse_genomes_project 8 96209146 96219551 + MGP_129S1SvImJ_P0090037 Cx3cl1 protein_coding protein_coding MGP_129S1SvImJ_T0090038.1 MGP_129S1SvImJ_G0033968.1 mouse_genomes_project 8 96209341 96216770 + MGP_129S1SvImJ_P0090038 Cx3cl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090039.1 MGP_129S1SvImJ_G0033968.1 mouse_genomes_project 8 96209362 96217154 + MGP_129S1SvImJ_P0090039 Cx3cl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090805.1 MGP_129S1SvImJ_G0034227.1 mouse_genomes_project 8 126004456 126015724 - MGP_129S1SvImJ_P0090805 Rnf166 protein_coding protein_coding MGP_129S1SvImJ_T0090806.1 MGP_129S1SvImJ_G0034227.1 mouse_genomes_project 8 126005170 126006536 - Rnf166 protein_coding retained_intron MGP_129S1SvImJ_T0090807.1 MGP_129S1SvImJ_G0034227.1 mouse_genomes_project 8 126006317 126015348 - Rnf166 protein_coding processed_transcript MGP_129S1SvImJ_T0011035.1 MGP_129S1SvImJ_G0009151.1 mouse_genomes_project 8 113228502 113228599 - Gm44489 miRNA miRNA MGP_129S1SvImJ_T0011739.1 MGP_129S1SvImJ_G0009855.1 mouse_genomes_project 8 64955540 64955631 + Gm26210 misc_RNA misc_RNA MGP_129S1SvImJ_T0005404.1 MGP_129S1SvImJ_G0004580.1 mouse_genomes_project 8 109437724 109439393 - Gm16208 antisense antisense MGP_129S1SvImJ_T0011030.1 MGP_129S1SvImJ_G0009146.1 mouse_genomes_project 8 108276967 108277030 - Mir7074 miRNA miRNA MGP_129S1SvImJ_T0011041.1 MGP_129S1SvImJ_G0009157.1 mouse_genomes_project 8 120627642 120627699 + Mir7077 miRNA miRNA MGP_129S1SvImJ_T0091057.1 MGP_129S1SvImJ_G0034303.1 mouse_genomes_project 8 132926509 133041003 - MGP_129S1SvImJ_P0091057 Ccdc7b protein_coding protein_coding MGP_129S1SvImJ_T0091058.1 MGP_129S1SvImJ_G0034303.1 mouse_genomes_project 8 132926510 133040914 - MGP_129S1SvImJ_P0091058 Ccdc7b protein_coding protein_coding MGP_129S1SvImJ_T0091059.1 MGP_129S1SvImJ_G0034303.1 mouse_genomes_project 8 132926567 133040932 - MGP_129S1SvImJ_P0091059 Ccdc7b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091062.1 MGP_129S1SvImJ_G0034303.1 mouse_genomes_project 8 132949575 133040997 - MGP_129S1SvImJ_P0091062 Ccdc7b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0015972.1 MGP_129S1SvImJ_G0014061.1 mouse_genomes_project 8 30929717 30930814 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0089429.1 MGP_129S1SvImJ_G0033775.1 mouse_genomes_project 8 72688834 72697449 - MGP_129S1SvImJ_P0089429 Cib3 protein_coding protein_coding MGP_129S1SvImJ_T0015969.1 MGP_129S1SvImJ_G0014058.1 mouse_genomes_project 8 21025231 21025486 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005406.1 MGP_129S1SvImJ_G0004582.1 mouse_genomes_project 8 112476316 112484535 - Gm17344 antisense antisense MGP_129S1SvImJ_T0005407.1 MGP_129S1SvImJ_G0004582.1 mouse_genomes_project 8 112478057 112484558 - Gm17344 antisense antisense MGP_129S1SvImJ_T0100126.1 MGP_129S1SvImJ_G0038193.1 mouse_genomes_project 8 78408414 78408520 + Gm23981 snRNA snRNA MGP_129S1SvImJ_T0088604.1 MGP_129S1SvImJ_G0033535.1 mouse_genomes_project 8 33360083 33372643 + MGP_129S1SvImJ_P0088604 Dusp4 protein_coding protein_coding MGP_129S1SvImJ_T0090216.1 MGP_129S1SvImJ_G0034033.1 mouse_genomes_project 8 107535117 107541003 + MGP_129S1SvImJ_P0090216 Hsf4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090217.1 MGP_129S1SvImJ_G0034033.1 mouse_genomes_project 8 107535145 107541160 + MGP_129S1SvImJ_P0090217 Hsf4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090218.1 MGP_129S1SvImJ_G0034033.1 mouse_genomes_project 8 107535190 107540975 + MGP_129S1SvImJ_P0090218 Hsf4 protein_coding protein_coding MGP_129S1SvImJ_T0090219.1 MGP_129S1SvImJ_G0034033.1 mouse_genomes_project 8 107535190 107540975 + MGP_129S1SvImJ_P0090219 Hsf4 protein_coding protein_coding MGP_129S1SvImJ_T0090220.1 MGP_129S1SvImJ_G0034033.1 mouse_genomes_project 8 107535190 107541162 + MGP_129S1SvImJ_P0090220 Hsf4 protein_coding protein_coding MGP_129S1SvImJ_T0090695.1 MGP_129S1SvImJ_G0034203.1 mouse_genomes_project 8 124043245 124108357 - MGP_129S1SvImJ_P0090695 Gm27021 protein_coding protein_coding MGP_129S1SvImJ_T0098393.1 MGP_129S1SvImJ_G0036478.1 mouse_genomes_project 8 90264912 90265825 - pseudogene pseudogene MGP_129S1SvImJ_T0090282.1 MGP_129S1SvImJ_G0034061.1 mouse_genomes_project 8 108161511 108170552 - MGP_129S1SvImJ_P0090282 Cenpt protein_coding protein_coding MGP_129S1SvImJ_T0089836.1 MGP_129S1SvImJ_G0033904.1 mouse_genomes_project 8 86587751 86644768 - MGP_129S1SvImJ_P0089836 Neto2 protein_coding protein_coding MGP_129S1SvImJ_T0089837.1 MGP_129S1SvImJ_G0033904.1 mouse_genomes_project 8 86587878 86654719 - MGP_129S1SvImJ_P0089837 Neto2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089612.1 MGP_129S1SvImJ_G0033841.1 mouse_genomes_project 8 84760110 84801505 + MGP_129S1SvImJ_P0089612 Adgrl1 protein_coding protein_coding MGP_129S1SvImJ_T0089613.1 MGP_129S1SvImJ_G0033841.1 mouse_genomes_project 8 84760146 84799564 + MGP_129S1SvImJ_P0089613 Adgrl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089614.1 MGP_129S1SvImJ_G0033841.1 mouse_genomes_project 8 84760259 84799564 + MGP_129S1SvImJ_P0089614 Adgrl1 protein_coding protein_coding MGP_129S1SvImJ_T0089615.1 MGP_129S1SvImJ_G0033841.1 mouse_genomes_project 8 84760274 84799539 + MGP_129S1SvImJ_P0089615 Adgrl1 protein_coding protein_coding MGP_129S1SvImJ_T0089616.1 MGP_129S1SvImJ_G0033841.1 mouse_genomes_project 8 84760274 84799539 + MGP_129S1SvImJ_P0089616 Adgrl1 protein_coding protein_coding MGP_129S1SvImJ_T0089617.1 MGP_129S1SvImJ_G0033841.1 mouse_genomes_project 8 84782661 84789644 + Adgrl1 protein_coding processed_transcript MGP_129S1SvImJ_T0089619.1 MGP_129S1SvImJ_G0033841.1 mouse_genomes_project 8 84794168 84797046 + Adgrl1 protein_coding retained_intron MGP_129S1SvImJ_T0089620.1 MGP_129S1SvImJ_G0033841.1 mouse_genomes_project 8 84795704 84797379 + Adgrl1 protein_coding retained_intron MGP_129S1SvImJ_T0089621.1 MGP_129S1SvImJ_G0033841.1 mouse_genomes_project 8 84797205 84798416 + MGP_129S1SvImJ_P0089621 Adgrl1 protein_coding protein_coding MGP_129S1SvImJ_T0088268.1 MGP_129S1SvImJ_G0033402.1 mouse_genomes_project 8 13270562 14951690 - MGP_129S1SvImJ_P0088268 Csmd1 protein_coding protein_coding MGP_129S1SvImJ_T0088269.1 MGP_129S1SvImJ_G0033402.1 mouse_genomes_project 8 13270570 13361307 - Csmd1 protein_coding retained_intron MGP_129S1SvImJ_T0088270.1 MGP_129S1SvImJ_G0033402.1 mouse_genomes_project 8 13456137 14951690 - Csmd1 protein_coding processed_transcript MGP_129S1SvImJ_T0088271.1 MGP_129S1SvImJ_G0033402.1 mouse_genomes_project 8 13671206 14951690 - Csmd1 protein_coding retained_intron MGP_129S1SvImJ_T0088272.1 MGP_129S1SvImJ_G0033402.1 mouse_genomes_project 8 13729258 14951995 - Csmd1 protein_coding processed_transcript MGP_129S1SvImJ_T0088273.1 MGP_129S1SvImJ_G0033402.1 mouse_genomes_project 8 14628266 14951794 - Csmd1 protein_coding retained_intron MGP_129S1SvImJ_T0088274.1 MGP_129S1SvImJ_G0033402.1 mouse_genomes_project 8 14792144 14951786 - Csmd1 protein_coding processed_transcript MGP_129S1SvImJ_T0088350.1 MGP_129S1SvImJ_G0033452.1 mouse_genomes_project 8 20316166 20330635 - MGP_129S1SvImJ_P0088350 Smim19 protein_coding protein_coding MGP_129S1SvImJ_T0088351.1 MGP_129S1SvImJ_G0033452.1 mouse_genomes_project 8 20316166 20330635 - MGP_129S1SvImJ_P0088351 Smim19 protein_coding protein_coding MGP_129S1SvImJ_T0090746.1 MGP_129S1SvImJ_G0034214.1 mouse_genomes_project 8 125118647 125122594 - MGP_129S1SvImJ_P0090746 Zcchc14 protein_coding protein_coding MGP_129S1SvImJ_T0090747.1 MGP_129S1SvImJ_G0034214.1 mouse_genomes_project 8 125120573 125172701 - MGP_129S1SvImJ_P0090747 Zcchc14 protein_coding protein_coding MGP_129S1SvImJ_T0090748.1 MGP_129S1SvImJ_G0034214.1 mouse_genomes_project 8 125124293 125125283 - Zcchc14 protein_coding retained_intron MGP_129S1SvImJ_T0090749.1 MGP_129S1SvImJ_G0034214.1 mouse_genomes_project 8 125126612 125148269 - Zcchc14 protein_coding retained_intron MGP_129S1SvImJ_T0088354.1 MGP_129S1SvImJ_G0033455.1 mouse_genomes_project 8 20479874 20483560 + MGP_129S1SvImJ_P0088354 Dkk4 protein_coding protein_coding MGP_129S1SvImJ_T0102830.1 MGP_129S1SvImJ_G0040662.1 mouse_genomes_project 8 16852871 16853822 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0090870.1 MGP_129S1SvImJ_G0034244.1 mouse_genomes_project 8 126775015 126794716 + MGP_129S1SvImJ_P0090870 Dpep1 protein_coding protein_coding MGP_129S1SvImJ_T0015956.1 MGP_129S1SvImJ_G0014045.1 mouse_genomes_project 8 11517609 11518216 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0090841.1 MGP_129S1SvImJ_G0034238.1 mouse_genomes_project 8 126416774 126435970 + MGP_129S1SvImJ_P0090841 Cdh15 protein_coding protein_coding MGP_129S1SvImJ_T0100108.1 MGP_129S1SvImJ_G0038175.1 mouse_genomes_project 8 30625794 30625914 + Gm22140 snRNA snRNA MGP_129S1SvImJ_T0088060.1 MGP_129S1SvImJ_G0033335.1 mouse_genomes_project 8 1486612 1515100 + MGP_129S1SvImJ_P0088060 Cers4 protein_coding protein_coding MGP_129S1SvImJ_T0088061.1 MGP_129S1SvImJ_G0033335.1 mouse_genomes_project 8 1486726 1512177 + MGP_129S1SvImJ_P0088061 Cers4 protein_coding protein_coding MGP_129S1SvImJ_T0088062.1 MGP_129S1SvImJ_G0033335.1 mouse_genomes_project 8 1486785 1528800 + MGP_129S1SvImJ_P0088062 Cers4 protein_coding protein_coding MGP_129S1SvImJ_T0088063.1 MGP_129S1SvImJ_G0033335.1 mouse_genomes_project 8 1486987 1520137 + MGP_129S1SvImJ_P0088063 Cers4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088064.1 MGP_129S1SvImJ_G0033335.1 mouse_genomes_project 8 1487034 1521567 + Cers4 protein_coding retained_intron MGP_129S1SvImJ_T0088065.1 MGP_129S1SvImJ_G0033335.1 mouse_genomes_project 8 1487037 1521409 + MGP_129S1SvImJ_P0088065 Cers4 protein_coding protein_coding MGP_129S1SvImJ_T0088066.1 MGP_129S1SvImJ_G0033335.1 mouse_genomes_project 8 1487043 1518910 + Cers4 protein_coding retained_intron MGP_129S1SvImJ_T0088067.1 MGP_129S1SvImJ_G0033335.1 mouse_genomes_project 8 1487067 1519001 + Cers4 protein_coding retained_intron MGP_129S1SvImJ_T0088068.1 MGP_129S1SvImJ_G0033335.1 mouse_genomes_project 8 1487106 1516969 + Cers4 protein_coding retained_intron MGP_129S1SvImJ_T0090329.1 MGP_129S1SvImJ_G0034079.1 mouse_genomes_project 8 108553223 108564871 - MGP_129S1SvImJ_P0090329 Slc7a6os protein_coding protein_coding MGP_129S1SvImJ_T0088243.1 MGP_129S1SvImJ_G0033396.1 mouse_genomes_project 8 12160774 12162877 - MGP_129S1SvImJ_P0088243 protein_coding protein_coding MGP_129S1SvImJ_T0088749.1 MGP_129S1SvImJ_G0033579.1 mouse_genomes_project 8 45002433 45011959 + MGP_129S1SvImJ_P0088749 protein_coding protein_coding MGP_129S1SvImJ_T0088750.1 MGP_129S1SvImJ_G0033579.1 mouse_genomes_project 8 45002519 45009314 + MGP_129S1SvImJ_P0088750 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0010995.1 MGP_129S1SvImJ_G0009111.1 mouse_genomes_project 8 71243331 71243425 + Mir1969 miRNA miRNA MGP_129S1SvImJ_T0011024.1 MGP_129S1SvImJ_G0009140.1 mouse_genomes_project 8 98201080 98201156 + Gm24132 miRNA miRNA MGP_129S1SvImJ_T0089421.1 MGP_129S1SvImJ_G0033771.1 mouse_genomes_project 8 72579366 72583851 + MGP_129S1SvImJ_P0089421 Olfr374 protein_coding protein_coding MGP_129S1SvImJ_T0009191.1 MGP_129S1SvImJ_G0007385.1 mouse_genomes_project 8 124021743 124028107 + Gm10614 lincRNA lincRNA MGP_129S1SvImJ_T0088710.1 MGP_129S1SvImJ_G0033571.1 mouse_genomes_project 8 44089161 44108579 + MGP_129S1SvImJ_P0088710 Mtnr1a protein_coding protein_coding MGP_129S1SvImJ_T0088711.1 MGP_129S1SvImJ_G0033571.1 mouse_genomes_project 8 44089398 44107579 + MGP_129S1SvImJ_P0088711 Mtnr1a protein_coding protein_coding MGP_129S1SvImJ_T0100123.1 MGP_129S1SvImJ_G0038190.1 mouse_genomes_project 8 76803286 76803393 - Gm22509 snRNA snRNA MGP_129S1SvImJ_T0089251.1 MGP_129S1SvImJ_G0033721.1 mouse_genomes_project 8 71007909 71012137 + MGP_129S1SvImJ_P0089251 Gm3336 protein_coding protein_coding MGP_129S1SvImJ_T0016002.1 MGP_129S1SvImJ_G0014091.1 mouse_genomes_project 8 82596504 82598121 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0088028.1 MGP_129S1SvImJ_G0033328.1 mouse_genomes_project 8 1224175 1233282 + MGP_129S1SvImJ_P0088028 protein_coding protein_coding MGP_129S1SvImJ_T0088029.1 MGP_129S1SvImJ_G0033328.1 mouse_genomes_project 8 1224243 1233282 + MGP_129S1SvImJ_P0088029 protein_coding protein_coding MGP_129S1SvImJ_T0088030.1 MGP_129S1SvImJ_G0033328.1 mouse_genomes_project 8 1224243 1233282 + MGP_129S1SvImJ_P0088030 protein_coding protein_coding MGP_129S1SvImJ_T0088031.1 MGP_129S1SvImJ_G0033328.1 mouse_genomes_project 8 1224279 1236808 + MGP_129S1SvImJ_P0088031 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088032.1 MGP_129S1SvImJ_G0033328.1 mouse_genomes_project 8 1224324 1231240 + MGP_129S1SvImJ_P0088032 protein_coding protein_coding MGP_129S1SvImJ_T0088033.1 MGP_129S1SvImJ_G0033328.1 mouse_genomes_project 8 1225518 1233282 + MGP_129S1SvImJ_P0088033 protein_coding protein_coding MGP_129S1SvImJ_T0088034.1 MGP_129S1SvImJ_G0033328.1 mouse_genomes_project 8 1228674 1231252 + MGP_129S1SvImJ_P0088034 protein_coding protein_coding MGP_129S1SvImJ_T0088035.1 MGP_129S1SvImJ_G0033328.1 mouse_genomes_project 8 1229867 1231587 + protein_coding processed_transcript MGP_129S1SvImJ_T0088036.1 MGP_129S1SvImJ_G0033328.1 mouse_genomes_project 8 1230047 1231711 + protein_coding retained_intron MGP_129S1SvImJ_T0089119.1 MGP_129S1SvImJ_G0033692.1 mouse_genomes_project 8 70388171 70397286 + MGP_129S1SvImJ_P0089119 protein_coding protein_coding MGP_129S1SvImJ_T0089120.1 MGP_129S1SvImJ_G0033692.1 mouse_genomes_project 8 70388373 70395572 + protein_coding retained_intron MGP_129S1SvImJ_T0089121.1 MGP_129S1SvImJ_G0033692.1 mouse_genomes_project 8 70388377 70420687 + MGP_129S1SvImJ_P0089121 protein_coding protein_coding MGP_129S1SvImJ_T0089122.1 MGP_129S1SvImJ_G0033692.1 mouse_genomes_project 8 70388379 70395586 + MGP_129S1SvImJ_P0089122 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089123.1 MGP_129S1SvImJ_G0033692.1 mouse_genomes_project 8 70388389 70397291 + MGP_129S1SvImJ_P0089123 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089124.1 MGP_129S1SvImJ_G0033692.1 mouse_genomes_project 8 70388943 70397349 + MGP_129S1SvImJ_P0089124 protein_coding protein_coding MGP_129S1SvImJ_T0011744.1 MGP_129S1SvImJ_G0009860.1 mouse_genomes_project 8 92406019 92406284 - Gm23408 misc_RNA misc_RNA MGP_129S1SvImJ_T0089276.1 MGP_129S1SvImJ_G0033733.1 mouse_genomes_project 8 71197489 71207684 - MGP_129S1SvImJ_P0089276 Slc5a5 protein_coding protein_coding MGP_129S1SvImJ_T0090647.1 MGP_129S1SvImJ_G0034191.1 mouse_genomes_project 8 123049430 123114459 + MGP_129S1SvImJ_P0090647 Atp2c2 protein_coding protein_coding MGP_129S1SvImJ_T0088982.1 MGP_129S1SvImJ_G0033647.1 mouse_genomes_project 8 65021403 65042626 - MGP_129S1SvImJ_P0088982 Trim60 protein_coding protein_coding MGP_129S1SvImJ_T0089240.1 MGP_129S1SvImJ_G0033713.1 mouse_genomes_project 8 70870113 70872922 + MGP_129S1SvImJ_P0089240 Isyna1 protein_coding protein_coding MGP_129S1SvImJ_T0089241.1 MGP_129S1SvImJ_G0033714.1 mouse_genomes_project 8 70873119 70883909 - MGP_129S1SvImJ_P0089241 Ssbp4 protein_coding protein_coding MGP_129S1SvImJ_T0089288.1 MGP_129S1SvImJ_G0033738.1 mouse_genomes_project 8 71633715 71748340 + MGP_129S1SvImJ_P0089288 Myo9b protein_coding protein_coding MGP_129S1SvImJ_T0089289.1 MGP_129S1SvImJ_G0033738.1 mouse_genomes_project 8 71633715 71748340 + MGP_129S1SvImJ_P0089289 Myo9b protein_coding protein_coding MGP_129S1SvImJ_T0089290.1 MGP_129S1SvImJ_G0033738.1 mouse_genomes_project 8 71633715 71748340 + MGP_129S1SvImJ_P0089290 Myo9b protein_coding protein_coding MGP_129S1SvImJ_T0089291.1 MGP_129S1SvImJ_G0033738.1 mouse_genomes_project 8 71633769 71715113 + MGP_129S1SvImJ_P0089291 Myo9b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089292.1 MGP_129S1SvImJ_G0033738.1 mouse_genomes_project 8 71633771 71729984 + MGP_129S1SvImJ_P0089292 Myo9b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089293.1 MGP_129S1SvImJ_G0033738.1 mouse_genomes_project 8 71730568 71747605 + MGP_129S1SvImJ_P0089293 Myo9b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089863.1 MGP_129S1SvImJ_G0033910.1 mouse_genomes_project 8 87724889 87725794 + MGP_129S1SvImJ_P0089863 Gm10638 protein_coding protein_coding MGP_129S1SvImJ_T0002355.1 MGP_129S1SvImJ_G0002266.1 mouse_genomes_project 8 85076731 85078911 + TEC TEC MGP_129S1SvImJ_T0089784.1 MGP_129S1SvImJ_G0033889.1 mouse_genomes_project 8 85982737 86003084 + MGP_129S1SvImJ_P0089784 Tnpo2 protein_coding protein_coding MGP_129S1SvImJ_T0089785.1 MGP_129S1SvImJ_G0033889.1 mouse_genomes_project 8 85982990 86003084 + MGP_129S1SvImJ_P0089785 Tnpo2 protein_coding protein_coding MGP_129S1SvImJ_T0089786.1 MGP_129S1SvImJ_G0033889.1 mouse_genomes_project 8 85984213 86003088 + MGP_129S1SvImJ_P0089786 Tnpo2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0090684.1 MGP_129S1SvImJ_G0034200.1 mouse_genomes_project 8 123628724 123986010 + MGP_129S1SvImJ_P0090684 Gse1 protein_coding protein_coding MGP_129S1SvImJ_T0090685.1 MGP_129S1SvImJ_G0034200.1 mouse_genomes_project 8 123907201 124013769 + MGP_129S1SvImJ_P0090685 Gse1 protein_coding protein_coding MGP_129S1SvImJ_T0090686.1 MGP_129S1SvImJ_G0034200.1 mouse_genomes_project 8 123963606 124011859 + MGP_129S1SvImJ_P0090686 Gse1 protein_coding protein_coding MGP_129S1SvImJ_T0090687.1 MGP_129S1SvImJ_G0034200.1 mouse_genomes_project 8 123965178 124011705 + MGP_129S1SvImJ_P0090687 Gse1 protein_coding protein_coding MGP_129S1SvImJ_T0090688.1 MGP_129S1SvImJ_G0034200.1 mouse_genomes_project 8 124003659 124005651 + Gse1 protein_coding retained_intron MGP_129S1SvImJ_T0090689.1 MGP_129S1SvImJ_G0034200.1 mouse_genomes_project 8 124003707 124007589 + Gse1 protein_coding processed_transcript MGP_129S1SvImJ_T0009090.1 MGP_129S1SvImJ_G0007311.1 mouse_genomes_project 8 26871924 26874075 + Gm26795 lincRNA lincRNA MGP_129S1SvImJ_T0009091.1 MGP_129S1SvImJ_G0007311.1 mouse_genomes_project 8 26871951 26872728 + Gm26795 lincRNA lincRNA MGP_129S1SvImJ_T0018506.1 MGP_129S1SvImJ_G0015716.1 mouse_genomes_project 8 72627010 72641471 - Gm16091 processed_transcript processed_transcript MGP_129S1SvImJ_T0010977.1 MGP_129S1SvImJ_G0009093.1 mouse_genomes_project 8 21040286 21040414 + Mir486 miRNA miRNA MGP_129S1SvImJ_T0089258.1 MGP_129S1SvImJ_G0033723.1 mouse_genomes_project 8 71056794 71059619 + MGP_129S1SvImJ_P0089258 Rab3a protein_coding protein_coding MGP_129S1SvImJ_T0089259.1 MGP_129S1SvImJ_G0033723.1 mouse_genomes_project 8 71057395 71058638 + Rab3a protein_coding retained_intron MGP_129S1SvImJ_T0088120.1 MGP_129S1SvImJ_G0033362.1 mouse_genomes_project 8 9685586 9690430 + MGP_129S1SvImJ_P0088120 Sox1 protein_coding protein_coding MGP_129S1SvImJ_T0089536.1 MGP_129S1SvImJ_G0033814.1 mouse_genomes_project 8 80366156 80401112 - MGP_129S1SvImJ_P0089536 Abce1 protein_coding protein_coding MGP_129S1SvImJ_T0088691.1 MGP_129S1SvImJ_G0033562.1 mouse_genomes_project 8 40173169 40211379 - MGP_129S1SvImJ_P0088691 Asah1 protein_coding protein_coding MGP_129S1SvImJ_T0088692.1 MGP_129S1SvImJ_G0033562.1 mouse_genomes_project 8 40173631 40184081 - Asah1 protein_coding retained_intron MGP_129S1SvImJ_T0088693.1 MGP_129S1SvImJ_G0033562.1 mouse_genomes_project 8 40174297 40176792 - Asah1 protein_coding retained_intron MGP_129S1SvImJ_T0088694.1 MGP_129S1SvImJ_G0033562.1 mouse_genomes_project 8 40180223 40211241 - MGP_129S1SvImJ_P0088694 Asah1 protein_coding protein_coding MGP_129S1SvImJ_T0088695.1 MGP_129S1SvImJ_G0033562.1 mouse_genomes_project 8 40188051 40211379 - MGP_129S1SvImJ_P0088695 Asah1 protein_coding protein_coding MGP_129S1SvImJ_T0011053.1 MGP_129S1SvImJ_G0009169.1 mouse_genomes_project 8 132215230 132215308 - Mir21c miRNA miRNA MGP_129S1SvImJ_T0090060.1 MGP_129S1SvImJ_G0033974.1 mouse_genomes_project 8 96344699 96361791 - MGP_129S1SvImJ_P0090060 Ccdc102a protein_coding protein_coding MGP_129S1SvImJ_T0090061.1 MGP_129S1SvImJ_G0033974.1 mouse_genomes_project 8 96357258 96361215 - MGP_129S1SvImJ_P0090061 Ccdc102a protein_coding protein_coding MGP_129S1SvImJ_T0100140.1 MGP_129S1SvImJ_G0038207.1 mouse_genomes_project 8 114704620 114704724 + Gm23853 snRNA snRNA MGP_129S1SvImJ_T0088294.1 MGP_129S1SvImJ_G0033411.1 mouse_genomes_project 8 16595260 16596111 - MGP_129S1SvImJ_P0088294 protein_coding protein_coding MGP_129S1SvImJ_T0009085.1 MGP_129S1SvImJ_G0007306.1 mouse_genomes_project 8 20334048 20337121 + Gm17491 lincRNA lincRNA MGP_129S1SvImJ_T0089965.1 MGP_129S1SvImJ_G0033944.1 mouse_genomes_project 8 94571660 94603146 - MGP_129S1SvImJ_P0089965 Ces1e protein_coding protein_coding MGP_129S1SvImJ_T0089966.1 MGP_129S1SvImJ_G0033944.1 mouse_genomes_project 8 94571846 94603145 - MGP_129S1SvImJ_P0089966 Ces1e protein_coding protein_coding MGP_129S1SvImJ_T0089967.1 MGP_129S1SvImJ_G0033944.1 mouse_genomes_project 8 94582952 94592134 - Ces1e protein_coding retained_intron MGP_129S1SvImJ_T0090935.1 MGP_129S1SvImJ_G0034262.1 mouse_genomes_project 8 127475072 127496407 - MGP_129S1SvImJ_P0090935 Ccsap protein_coding protein_coding MGP_129S1SvImJ_T0090936.1 MGP_129S1SvImJ_G0034262.1 mouse_genomes_project 8 127475085 127497086 - MGP_129S1SvImJ_P0090936 Ccsap protein_coding protein_coding MGP_129S1SvImJ_T0090790.1 MGP_129S1SvImJ_G0034222.1 mouse_genomes_project 8 125908357 125954546 + MGP_129S1SvImJ_P0090790 Zc3h18 protein_coding protein_coding MGP_129S1SvImJ_T0090791.1 MGP_129S1SvImJ_G0034222.1 mouse_genomes_project 8 125908381 125954554 + MGP_129S1SvImJ_P0090791 Zc3h18 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0090792.1 MGP_129S1SvImJ_G0034222.1 mouse_genomes_project 8 125908391 125954547 + MGP_129S1SvImJ_P0090792 Zc3h18 protein_coding protein_coding MGP_129S1SvImJ_T0090793.1 MGP_129S1SvImJ_G0034222.1 mouse_genomes_project 8 125908392 125915480 + MGP_129S1SvImJ_P0090793 Zc3h18 protein_coding protein_coding MGP_129S1SvImJ_T0090794.1 MGP_129S1SvImJ_G0034222.1 mouse_genomes_project 8 125908396 125921498 + Zc3h18 protein_coding retained_intron MGP_129S1SvImJ_T0090795.1 MGP_129S1SvImJ_G0034222.1 mouse_genomes_project 8 125908429 125954546 + MGP_129S1SvImJ_P0090795 Zc3h18 protein_coding protein_coding MGP_129S1SvImJ_T0090796.1 MGP_129S1SvImJ_G0034222.1 mouse_genomes_project 8 125935034 125937896 + Zc3h18 protein_coding processed_transcript MGP_129S1SvImJ_T0090797.1 MGP_129S1SvImJ_G0034222.1 mouse_genomes_project 8 125935104 125943172 + MGP_129S1SvImJ_P0090797 Zc3h18 protein_coding protein_coding MGP_129S1SvImJ_T0090798.1 MGP_129S1SvImJ_G0034222.1 mouse_genomes_project 8 125939611 125954546 + Zc3h18 protein_coding retained_intron MGP_129S1SvImJ_T0090799.1 MGP_129S1SvImJ_G0034222.1 mouse_genomes_project 8 125939786 125942673 + Zc3h18 protein_coding retained_intron MGP_129S1SvImJ_T0090800.1 MGP_129S1SvImJ_G0034222.1 mouse_genomes_project 8 125943093 125948017 + MGP_129S1SvImJ_P0090800 Zc3h18 protein_coding protein_coding MGP_129S1SvImJ_T0088910.1 MGP_129S1SvImJ_G0033629.1 mouse_genomes_project 8 60386495 60430151 + MGP_129S1SvImJ_P0088910 Aadat protein_coding protein_coding MGP_129S1SvImJ_T0089319.1 MGP_129S1SvImJ_G0033743.1 mouse_genomes_project 8 71787871 71795733 + MGP_129S1SvImJ_P0089319 Babam1 protein_coding protein_coding MGP_129S1SvImJ_T0005343.1 MGP_129S1SvImJ_G0004532.1 mouse_genomes_project 8 661809 696309 + Gm16553 antisense antisense MGP_129S1SvImJ_T0088714.1 MGP_129S1SvImJ_G0033574.1 mouse_genomes_project 8 44299793 44341096 - MGP_129S1SvImJ_P0088714 Cyp4v3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088715.1 MGP_129S1SvImJ_G0033574.1 mouse_genomes_project 8 44337575 44373921 - MGP_129S1SvImJ_P0088715 Cyp4v3 protein_coding protein_coding MGP_129S1SvImJ_T0088391.1 MGP_129S1SvImJ_G0033462.1 mouse_genomes_project 8 21051900 21057588 + MGP_129S1SvImJ_P0088391 Nkx6-3 protein_coding protein_coding MGP_129S1SvImJ_T0089086.1 MGP_129S1SvImJ_G0033679.1 mouse_genomes_project 8 70045571 70101557 + MGP_129S1SvImJ_P0089086 Pbx4 protein_coding protein_coding MGP_129S1SvImJ_T0089087.1 MGP_129S1SvImJ_G0033679.1 mouse_genomes_project 8 70045704 70081528 + Pbx4 protein_coding retained_intron MGP_129S1SvImJ_T0089088.1 MGP_129S1SvImJ_G0033679.1 mouse_genomes_project 8 70045717 70101557 + MGP_129S1SvImJ_P0089088 Pbx4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089089.1 MGP_129S1SvImJ_G0033679.1 mouse_genomes_project 8 70045740 70099951 + MGP_129S1SvImJ_P0089089 Pbx4 protein_coding protein_coding MGP_129S1SvImJ_T0089090.1 MGP_129S1SvImJ_G0033679.1 mouse_genomes_project 8 70045742 70101557 + MGP_129S1SvImJ_P0089090 Pbx4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089091.1 MGP_129S1SvImJ_G0033679.1 mouse_genomes_project 8 70045770 70101557 + MGP_129S1SvImJ_P0089091 Pbx4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089092.1 MGP_129S1SvImJ_G0033679.1 mouse_genomes_project 8 70062940 70092680 + Pbx4 protein_coding processed_transcript MGP_129S1SvImJ_T0089093.1 MGP_129S1SvImJ_G0033679.1 mouse_genomes_project 8 70093818 70099903 + Pbx4 protein_coding retained_intron MGP_129S1SvImJ_T0089094.1 MGP_129S1SvImJ_G0033679.1 mouse_genomes_project 8 70094015 70101557 + Pbx4 protein_coding retained_intron MGP_129S1SvImJ_T0089588.1 MGP_129S1SvImJ_G0033837.1 mouse_genomes_project 8 84506336 84510772 + Ptger1 protein_coding retained_intron MGP_129S1SvImJ_T0089589.1 MGP_129S1SvImJ_G0033837.1 mouse_genomes_project 8 84506366 84512254 + MGP_129S1SvImJ_P0089589 Ptger1 protein_coding protein_coding MGP_129S1SvImJ_T0015962.1 MGP_129S1SvImJ_G0014051.1 mouse_genomes_project 8 17075056 17077737 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0090074.1 MGP_129S1SvImJ_G0033981.1 mouse_genomes_project 8 96712843 96787041 - MGP_129S1SvImJ_P0090074 Cngb1 protein_coding protein_coding MGP_129S1SvImJ_T0090075.1 MGP_129S1SvImJ_G0033981.1 mouse_genomes_project 8 96714779 96758892 - MGP_129S1SvImJ_P0090075 Cngb1 protein_coding protein_coding MGP_129S1SvImJ_T0090076.1 MGP_129S1SvImJ_G0033981.1 mouse_genomes_project 8 96714785 96758912 - MGP_129S1SvImJ_P0090076 Cngb1 protein_coding protein_coding MGP_129S1SvImJ_T0090077.1 MGP_129S1SvImJ_G0033981.1 mouse_genomes_project 8 96770036 96784315 - Cngb1 protein_coding retained_intron MGP_129S1SvImJ_T0090078.1 MGP_129S1SvImJ_G0033981.1 mouse_genomes_project 8 96770036 96784315 - Cngb1 protein_coding retained_intron MGP_129S1SvImJ_T0090079.1 MGP_129S1SvImJ_G0033981.1 mouse_genomes_project 8 96770036 96773121 - Cngb1 protein_coding retained_intron MGP_129S1SvImJ_T0090080.1 MGP_129S1SvImJ_G0033981.1 mouse_genomes_project 8 96770036 96787041 - MGP_129S1SvImJ_P0090080 Cngb1 protein_coding protein_coding MGP_129S1SvImJ_T0090081.1 MGP_129S1SvImJ_G0033981.1 mouse_genomes_project 8 96770036 96773521 - MGP_129S1SvImJ_P0090081 Cngb1 protein_coding protein_coding MGP_129S1SvImJ_T0090082.1 MGP_129S1SvImJ_G0033981.1 mouse_genomes_project 8 96770039 96787026 - Cngb1 protein_coding retained_intron MGP_129S1SvImJ_T0090167.1 MGP_129S1SvImJ_G0034014.1 mouse_genomes_project 8 106742920 106748286 + MGP_129S1SvImJ_P0090167 Pdp2 protein_coding protein_coding MGP_129S1SvImJ_T0089200.1 MGP_129S1SvImJ_G0033707.1 mouse_genomes_project 8 70761463 70772368 + MGP_129S1SvImJ_P0089200 Crlf1 protein_coding protein_coding MGP_129S1SvImJ_T0089201.1 MGP_129S1SvImJ_G0033707.1 mouse_genomes_project 8 70761666 70769223 + MGP_129S1SvImJ_P0089201 Crlf1 protein_coding protein_coding MGP_129S1SvImJ_T0089202.1 MGP_129S1SvImJ_G0033707.1 mouse_genomes_project 8 70769425 70772317 + MGP_129S1SvImJ_P0089202 Crlf1 protein_coding protein_coding MGP_129S1SvImJ_T0090207.1 MGP_129S1SvImJ_G0034030.1 mouse_genomes_project 8 107517284 107519800 - MGP_129S1SvImJ_P0090207 B3gnt9 protein_coding protein_coding MGP_129S1SvImJ_T0090208.1 MGP_129S1SvImJ_G0034030.1 mouse_genomes_project 8 107517285 107519798 - MGP_129S1SvImJ_P0090208 B3gnt9 protein_coding protein_coding MGP_129S1SvImJ_T0090209.1 MGP_129S1SvImJ_G0034030.1 mouse_genomes_project 8 107518968 107519798 - MGP_129S1SvImJ_P0090209 B3gnt9 protein_coding protein_coding MGP_129S1SvImJ_T0089275.1 MGP_129S1SvImJ_G0033732.1 mouse_genomes_project 8 71180344 71186939 - MGP_129S1SvImJ_P0089275 Ccdc124 protein_coding protein_coding MGP_129S1SvImJ_T0089622.1 MGP_129S1SvImJ_G0033843.1 mouse_genomes_project 8 84815349 84830954 + MGP_129S1SvImJ_P0089622 Asf1b protein_coding protein_coding MGP_129S1SvImJ_T0089623.1 MGP_129S1SvImJ_G0033843.1 mouse_genomes_project 8 84815556 84828602 + Asf1b protein_coding processed_transcript MGP_129S1SvImJ_T0089624.1 MGP_129S1SvImJ_G0033843.1 mouse_genomes_project 8 84825795 84829300 + Asf1b protein_coding retained_intron MGP_129S1SvImJ_T0011011.1 MGP_129S1SvImJ_G0009127.1 mouse_genomes_project 8 85084505 85084588 - Mir3074-2 miRNA miRNA MGP_129S1SvImJ_T0089172.1 MGP_129S1SvImJ_G0033699.1 mouse_genomes_project 8 70555942 70566013 - MGP_129S1SvImJ_P0089172 Ddx49 protein_coding protein_coding MGP_129S1SvImJ_T0089173.1 MGP_129S1SvImJ_G0033699.1 mouse_genomes_project 8 70555953 70565976 - Ddx49 protein_coding retained_intron MGP_129S1SvImJ_T0089174.1 MGP_129S1SvImJ_G0033699.1 mouse_genomes_project 8 70556662 70558813 - Ddx49 protein_coding retained_intron MGP_129S1SvImJ_T0089175.1 MGP_129S1SvImJ_G0033699.1 mouse_genomes_project 8 70557873 70565997 - MGP_129S1SvImJ_P0089175 Ddx49 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089176.1 MGP_129S1SvImJ_G0033699.1 mouse_genomes_project 8 70558895 70565987 - Ddx49 protein_coding retained_intron MGP_129S1SvImJ_T0089177.1 MGP_129S1SvImJ_G0033699.1 mouse_genomes_project 8 70564435 70565958 - Ddx49 protein_coding retained_intron MGP_129S1SvImJ_T0090139.1 MGP_129S1SvImJ_G0034004.1 mouse_genomes_project 8 106398557 106415518 - MGP_129S1SvImJ_P0090139 Cmtm2a protein_coding protein_coding MGP_129S1SvImJ_T0005342.1 MGP_129S1SvImJ_G0004531.1 mouse_genomes_project 8 616943 618089 - antisense antisense MGP_129S1SvImJ_T0011014.1 MGP_129S1SvImJ_G0009130.1 mouse_genomes_project 8 86008854 86008941 + Mir7070 miRNA miRNA MGP_129S1SvImJ_T0088823.1 MGP_129S1SvImJ_G0033597.1 mouse_genomes_project 8 46702731 46724789 + MGP_129S1SvImJ_P0088823 Rwdd4a protein_coding protein_coding MGP_129S1SvImJ_T0088824.1 MGP_129S1SvImJ_G0033597.1 mouse_genomes_project 8 46702731 46723243 + MGP_129S1SvImJ_P0088824 Rwdd4a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088825.1 MGP_129S1SvImJ_G0033597.1 mouse_genomes_project 8 46702753 46715483 + MGP_129S1SvImJ_P0088825 Rwdd4a protein_coding protein_coding MGP_129S1SvImJ_T0088826.1 MGP_129S1SvImJ_G0033597.1 mouse_genomes_project 8 46719871 46723254 + Rwdd4a protein_coding processed_transcript MGP_129S1SvImJ_T0088827.1 MGP_129S1SvImJ_G0033597.1 mouse_genomes_project 8 46722421 46724919 + Rwdd4a protein_coding retained_intron MGP_129S1SvImJ_T0009088.1 MGP_129S1SvImJ_G0007309.1 mouse_genomes_project 8 25330499 25337250 + lincRNA lincRNA MGP_129S1SvImJ_T0089020.1 MGP_129S1SvImJ_G0033660.1 mouse_genomes_project 8 68407008 68481642 + MGP_129S1SvImJ_P0089020 Sh2d4a protein_coding protein_coding MGP_129S1SvImJ_T0101394.1 MGP_129S1SvImJ_G0039461.1 mouse_genomes_project 8 67365416 67365566 - Gm24677 snoRNA snoRNA MGP_129S1SvImJ_T0091001.1 MGP_129S1SvImJ_G0034288.1 mouse_genomes_project 8 129515736 129531072 + Ntpcr protein_coding processed_transcript MGP_129S1SvImJ_T0091002.1 MGP_129S1SvImJ_G0034288.1 mouse_genomes_project 8 129515801 129533582 + MGP_129S1SvImJ_P0091002 Ntpcr protein_coding protein_coding MGP_129S1SvImJ_T0091003.1 MGP_129S1SvImJ_G0034288.1 mouse_genomes_project 8 129515805 129523909 + Ntpcr protein_coding processed_transcript MGP_129S1SvImJ_T0091004.1 MGP_129S1SvImJ_G0034288.1 mouse_genomes_project 8 129518863 129533807 + Ntpcr protein_coding processed_transcript MGP_129S1SvImJ_T0091005.1 MGP_129S1SvImJ_G0034288.1 mouse_genomes_project 8 129519975 129534008 + MGP_129S1SvImJ_P0091005 Ntpcr protein_coding protein_coding MGP_129S1SvImJ_T0091006.1 MGP_129S1SvImJ_G0034288.1 mouse_genomes_project 8 129520005 129522102 + Ntpcr protein_coding retained_intron MGP_129S1SvImJ_T0091007.1 MGP_129S1SvImJ_G0034288.1 mouse_genomes_project 8 129520010 129524952 + MGP_129S1SvImJ_P0091007 Ntpcr protein_coding protein_coding MGP_129S1SvImJ_T0091008.1 MGP_129S1SvImJ_G0034288.1 mouse_genomes_project 8 129521607 129533770 + MGP_129S1SvImJ_P0091008 Ntpcr protein_coding protein_coding MGP_129S1SvImJ_T0091021.1 MGP_129S1SvImJ_G0034296.1 mouse_genomes_project 8 130421576 130428258 - MGP_129S1SvImJ_P0091021 Irf2bp2 protein_coding protein_coding MGP_129S1SvImJ_T0011731.1 MGP_129S1SvImJ_G0009847.1 mouse_genomes_project 8 4590080 4590282 + Gm27545 misc_RNA misc_RNA MGP_129S1SvImJ_T0009195.1 MGP_129S1SvImJ_G0007389.1 mouse_genomes_project 8 124473959 124474223 + Gm28324 lincRNA lincRNA MGP_129S1SvImJ_T0089748.1 MGP_129S1SvImJ_G0033879.1 mouse_genomes_project 8 85838342 85841253 + MGP_129S1SvImJ_P0089748 Dnase2a protein_coding protein_coding MGP_129S1SvImJ_T0089749.1 MGP_129S1SvImJ_G0033879.1 mouse_genomes_project 8 85838342 85841492 + MGP_129S1SvImJ_P0089749 Dnase2a protein_coding protein_coding MGP_129S1SvImJ_T0089750.1 MGP_129S1SvImJ_G0033879.1 mouse_genomes_project 8 85838429 85838983 + Dnase2a protein_coding retained_intron MGP_129S1SvImJ_T0089751.1 MGP_129S1SvImJ_G0033879.1 mouse_genomes_project 8 85838429 85839251 + Dnase2a protein_coding retained_intron MGP_129S1SvImJ_T0089752.1 MGP_129S1SvImJ_G0033879.1 mouse_genomes_project 8 85838472 85839708 + MGP_129S1SvImJ_P0089752 Dnase2a protein_coding protein_coding MGP_129S1SvImJ_T0089753.1 MGP_129S1SvImJ_G0033879.1 mouse_genomes_project 8 85838503 85844263 + Dnase2a protein_coding processed_transcript MGP_129S1SvImJ_T0089754.1 MGP_129S1SvImJ_G0033879.1 mouse_genomes_project 8 85838513 85839747 + MGP_129S1SvImJ_P0089754 Dnase2a protein_coding protein_coding MGP_129S1SvImJ_T0089755.1 MGP_129S1SvImJ_G0033879.1 mouse_genomes_project 8 85839617 85841245 + Dnase2a protein_coding processed_transcript MGP_129S1SvImJ_T0089759.1 MGP_129S1SvImJ_G0033879.1 mouse_genomes_project 8 85843174 85852657 + Dnase2a protein_coding processed_transcript MGP_129S1SvImJ_T0101390.1 MGP_129S1SvImJ_G0039457.1 mouse_genomes_project 8 63072792 63072926 - Gm24236 snoRNA snoRNA MGP_129S1SvImJ_T0009202.1 MGP_129S1SvImJ_G0007394.1 mouse_genomes_project 8 124934551 124934953 + Gm26784 lincRNA lincRNA MGP_129S1SvImJ_T0089518.1 MGP_129S1SvImJ_G0033809.1 mouse_genomes_project 8 79680506 79855964 + MGP_129S1SvImJ_P0089518 Zfp827 protein_coding protein_coding MGP_129S1SvImJ_T0089519.1 MGP_129S1SvImJ_G0033809.1 mouse_genomes_project 8 79680506 79727451 + MGP_129S1SvImJ_P0089519 Zfp827 protein_coding protein_coding MGP_129S1SvImJ_T0089520.1 MGP_129S1SvImJ_G0033809.1 mouse_genomes_project 8 79680656 79853077 + MGP_129S1SvImJ_P0089520 Zfp827 protein_coding protein_coding MGP_129S1SvImJ_T0089521.1 MGP_129S1SvImJ_G0033809.1 mouse_genomes_project 8 79776495 79855987 + MGP_129S1SvImJ_P0089521 Zfp827 protein_coding protein_coding MGP_129S1SvImJ_T0089522.1 MGP_129S1SvImJ_G0033809.1 mouse_genomes_project 8 79778651 79855413 + MGP_129S1SvImJ_P0089522 Zfp827 protein_coding protein_coding MGP_129S1SvImJ_T0089523.1 MGP_129S1SvImJ_G0033809.1 mouse_genomes_project 8 79836605 79853075 + MGP_129S1SvImJ_P0089523 Zfp827 protein_coding protein_coding MGP_129S1SvImJ_T0089524.1 MGP_129S1SvImJ_G0033809.1 mouse_genomes_project 8 79839770 79851982 + MGP_129S1SvImJ_P0089524 Zfp827 protein_coding protein_coding MGP_129S1SvImJ_T0009187.1 MGP_129S1SvImJ_G0007381.1 mouse_genomes_project 8 112923600 112925815 - Gm26832 lincRNA lincRNA MGP_129S1SvImJ_T0088203.1 MGP_129S1SvImJ_G0033382.1 mouse_genomes_project 8 10820203 10849348 - MGP_129S1SvImJ_P0088203 Gas6 protein_coding protein_coding MGP_129S1SvImJ_T0101382.1 MGP_129S1SvImJ_G0039449.1 mouse_genomes_project 8 44629710 44629842 - Gm23604 snoRNA snoRNA MGP_129S1SvImJ_T0088630.1 MGP_129S1SvImJ_G0033546.1 mouse_genomes_project 8 35684957 35686884 + MGP_129S1SvImJ_P0088630 AI429214 protein_coding protein_coding MGP_129S1SvImJ_T0090842.1 MGP_129S1SvImJ_G0034239.1 mouse_genomes_project 8 126453607 126551682 - MGP_129S1SvImJ_P0090842 Ankrd11 protein_coding protein_coding MGP_129S1SvImJ_T0090843.1 MGP_129S1SvImJ_G0034239.1 mouse_genomes_project 8 126454092 126551682 - MGP_129S1SvImJ_P0090843 Ankrd11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090844.1 MGP_129S1SvImJ_G0034239.1 mouse_genomes_project 8 126467357 126487517 - MGP_129S1SvImJ_P0090844 Ankrd11 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0090845.1 MGP_129S1SvImJ_G0034239.1 mouse_genomes_project 8 126476412 126551662 - Ankrd11 protein_coding retained_intron MGP_129S1SvImJ_T0088088.1 MGP_129S1SvImJ_G0033351.1 mouse_genomes_project 8 8402530 8518728 - MGP_129S1SvImJ_P0088088 Col4a1 protein_coding protein_coding MGP_129S1SvImJ_T0088089.1 MGP_129S1SvImJ_G0033351.1 mouse_genomes_project 8 8416397 8420774 - Col4a1 protein_coding processed_transcript MGP_129S1SvImJ_T0090539.1 MGP_129S1SvImJ_G0034147.1 mouse_genomes_project 8 114687032 114700003 - MGP_129S1SvImJ_P0090539 Tmem170 protein_coding protein_coding MGP_129S1SvImJ_T0090743.1 MGP_129S1SvImJ_G0034213.1 mouse_genomes_project 8 125108515 125117058 + MGP_129S1SvImJ_P0090743 Map1lc3b protein_coding protein_coding MGP_129S1SvImJ_T0090744.1 MGP_129S1SvImJ_G0034213.1 mouse_genomes_project 8 125108631 125111264 + Map1lc3b protein_coding retained_intron MGP_129S1SvImJ_T0090745.1 MGP_129S1SvImJ_G0034213.1 mouse_genomes_project 8 125108635 125116344 + Map1lc3b protein_coding retained_intron MGP_129S1SvImJ_T0009084.1 MGP_129S1SvImJ_G0007305.1 mouse_genomes_project 8 20246469 20247345 + 1810012K16Rik lincRNA lincRNA MGP_129S1SvImJ_T0089191.1 MGP_129S1SvImJ_G0033703.1 mouse_genomes_project 8 70639243 70647842 + MGP_129S1SvImJ_P0089191 Comp protein_coding protein_coding MGP_129S1SvImJ_T0100145.1 MGP_129S1SvImJ_G0038212.1 mouse_genomes_project 8 125357795 125357902 + Gm24283 snRNA snRNA MGP_129S1SvImJ_T0088296.1 MGP_129S1SvImJ_G0033413.1 mouse_genomes_project 8 16626636 16628889 + MGP_129S1SvImJ_P0088296 Spag11b protein_coding protein_coding MGP_129S1SvImJ_T0088297.1 MGP_129S1SvImJ_G0033413.1 mouse_genomes_project 8 16626675 16628628 + MGP_129S1SvImJ_P0088297 Spag11b protein_coding protein_coding MGP_129S1SvImJ_T0088514.1 MGP_129S1SvImJ_G0033498.1 mouse_genomes_project 8 25146496 25150622 + MGP_129S1SvImJ_P0088514 Zfp703 protein_coding protein_coding MGP_129S1SvImJ_T0088515.1 MGP_129S1SvImJ_G0033498.1 mouse_genomes_project 8 25146496 25150622 + MGP_129S1SvImJ_P0088515 Zfp703 protein_coding protein_coding MGP_129S1SvImJ_T0088225.1 MGP_129S1SvImJ_G0033390.1 mouse_genomes_project 8 11273082 11273880 + MGP_129S1SvImJ_P0088225 protein_coding protein_coding MGP_129S1SvImJ_T0090222.1 MGP_129S1SvImJ_G0034035.1 mouse_genomes_project 8 107545726 107554747 - MGP_129S1SvImJ_P0090222 4931428F04Rik protein_coding protein_coding MGP_129S1SvImJ_T0090223.1 MGP_129S1SvImJ_G0034035.1 mouse_genomes_project 8 107545726 107554747 - MGP_129S1SvImJ_P0090223 4931428F04Rik protein_coding protein_coding MGP_129S1SvImJ_T0089642.1 MGP_129S1SvImJ_G0033852.1 mouse_genomes_project 8 84936509 84938577 - MGP_129S1SvImJ_P0089642 protein_coding protein_coding MGP_129S1SvImJ_T0100116.1 MGP_129S1SvImJ_G0038183.1 mouse_genomes_project 8 53077899 53077961 + Gm27964 snRNA snRNA MGP_129S1SvImJ_T0011018.1 MGP_129S1SvImJ_G0009134.1 mouse_genomes_project 8 89196643 89196711 + Mir7071 miRNA miRNA MGP_129S1SvImJ_T0089530.1 MGP_129S1SvImJ_G0033813.1 mouse_genomes_project 8 80321830 80360978 + MGP_129S1SvImJ_P0089530 Otud4 protein_coding protein_coding MGP_129S1SvImJ_T0089531.1 MGP_129S1SvImJ_G0033813.1 mouse_genomes_project 8 80321916 80360926 + MGP_129S1SvImJ_P0089531 Otud4 protein_coding protein_coding MGP_129S1SvImJ_T0089532.1 MGP_129S1SvImJ_G0033813.1 mouse_genomes_project 8 80333470 80342474 + Otud4 protein_coding retained_intron MGP_129S1SvImJ_T0089533.1 MGP_129S1SvImJ_G0033813.1 mouse_genomes_project 8 80333882 80344497 + Otud4 protein_coding retained_intron MGP_129S1SvImJ_T0089534.1 MGP_129S1SvImJ_G0033813.1 mouse_genomes_project 8 80344337 80351743 + MGP_129S1SvImJ_P0089534 Otud4 protein_coding protein_coding MGP_129S1SvImJ_T0089535.1 MGP_129S1SvImJ_G0033813.1 mouse_genomes_project 8 80350076 80354632 + MGP_129S1SvImJ_P0089535 Otud4 protein_coding protein_coding MGP_129S1SvImJ_T0090999.1 MGP_129S1SvImJ_G0034286.1 mouse_genomes_project 8 129182711 129293503 - MGP_129S1SvImJ_P0090999 Sipa1l2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0088960.1 MGP_129S1SvImJ_G0033638.1 mouse_genomes_project 8 62014565 62081065 - MGP_129S1SvImJ_P0088960 Anxa10 protein_coding protein_coding MGP_129S1SvImJ_T0088961.1 MGP_129S1SvImJ_G0033638.1 mouse_genomes_project 8 62015044 62081071 - MGP_129S1SvImJ_P0088961 Anxa10 protein_coding protein_coding MGP_129S1SvImJ_T0088634.1 MGP_129S1SvImJ_G0033549.1 mouse_genomes_project 8 38357083 38423975 - MGP_129S1SvImJ_P0088634 Msr1 protein_coding protein_coding MGP_129S1SvImJ_T0088635.1 MGP_129S1SvImJ_G0033549.1 mouse_genomes_project 8 38379710 38423975 - MGP_129S1SvImJ_P0088635 Msr1 protein_coding protein_coding MGP_129S1SvImJ_T0090131.1 MGP_129S1SvImJ_G0034000.1 mouse_genomes_project 8 106205659 106251048 + MGP_129S1SvImJ_P0090131 Cdh5 protein_coding protein_coding MGP_129S1SvImJ_T0089935.1 MGP_129S1SvImJ_G0033932.1 mouse_genomes_project 8 92540389 92920957 + MGP_129S1SvImJ_P0089935 Fto protein_coding protein_coding MGP_129S1SvImJ_T0089936.1 MGP_129S1SvImJ_G0033932.1 mouse_genomes_project 8 92540392 92670819 + Fto protein_coding retained_intron MGP_129S1SvImJ_T0089937.1 MGP_129S1SvImJ_G0033932.1 mouse_genomes_project 8 92540415 92765491 + Fto protein_coding retained_intron MGP_129S1SvImJ_T0089938.1 MGP_129S1SvImJ_G0033932.1 mouse_genomes_project 8 92540425 92719752 + Fto protein_coding retained_intron MGP_129S1SvImJ_T0089939.1 MGP_129S1SvImJ_G0033932.1 mouse_genomes_project 8 92619923 92642042 + MGP_129S1SvImJ_P0089939 Fto protein_coding protein_coding MGP_129S1SvImJ_T0089940.1 MGP_129S1SvImJ_G0033932.1 mouse_genomes_project 8 92622745 92641666 + MGP_129S1SvImJ_P0089940 Fto protein_coding protein_coding MGP_129S1SvImJ_T0089941.1 MGP_129S1SvImJ_G0033932.1 mouse_genomes_project 8 92695151 92919464 + Fto protein_coding processed_transcript MGP_129S1SvImJ_T0090040.1 MGP_129S1SvImJ_G0033969.1 mouse_genomes_project 8 96245313 96246896 + MGP_129S1SvImJ_P0090040 Ccl17 protein_coding protein_coding MGP_129S1SvImJ_T0009199.1 MGP_129S1SvImJ_G0007391.1 mouse_genomes_project 8 124684919 124689168 - 5033426O07Rik lincRNA lincRNA MGP_129S1SvImJ_T0088281.1 MGP_129S1SvImJ_G0033404.1 mouse_genomes_project 8 16155892 16210705 - MGP_129S1SvImJ_P0088281 Angpt2 protein_coding protein_coding MGP_129S1SvImJ_T0088282.1 MGP_129S1SvImJ_G0033404.1 mouse_genomes_project 8 16157720 16166708 - Angpt2 protein_coding processed_transcript MGP_129S1SvImJ_T0015997.1 MGP_129S1SvImJ_G0014086.1 mouse_genomes_project 8 80392906 80393849 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0015967.1 MGP_129S1SvImJ_G0014056.1 mouse_genomes_project 8 19598019 19598460 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0090558.1 MGP_129S1SvImJ_G0034156.1 mouse_genomes_project 8 116585281 116597374 + MGP_129S1SvImJ_P0090558 Syce1l protein_coding protein_coding MGP_129S1SvImJ_T0090559.1 MGP_129S1SvImJ_G0034156.1 mouse_genomes_project 8 116585281 116597374 + MGP_129S1SvImJ_P0090559 Syce1l protein_coding protein_coding MGP_129S1SvImJ_T0089658.1 MGP_129S1SvImJ_G0033861.1 mouse_genomes_project 8 85130342 85137757 - MGP_129S1SvImJ_P0089658 Mri1 protein_coding protein_coding MGP_129S1SvImJ_T0089659.1 MGP_129S1SvImJ_G0033861.1 mouse_genomes_project 8 85131457 85136846 - MGP_129S1SvImJ_P0089659 Mri1 protein_coding protein_coding MGP_129S1SvImJ_T0089660.1 MGP_129S1SvImJ_G0033861.1 mouse_genomes_project 8 85134351 85137680 - MGP_129S1SvImJ_P0089660 Mri1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0089661.1 MGP_129S1SvImJ_G0033861.1 mouse_genomes_project 8 85134665 85137759 - Mri1 protein_coding processed_transcript MGP_129S1SvImJ_T0089662.1 MGP_129S1SvImJ_G0033861.1 mouse_genomes_project 8 85136222 85137759 - Mri1 protein_coding retained_intron MGP_129S1SvImJ_T0090027.1 MGP_129S1SvImJ_G0033963.1 mouse_genomes_project 8 96005897 96034324 - MGP_129S1SvImJ_P0090027 Fam192a protein_coding protein_coding MGP_129S1SvImJ_T0088836.1 MGP_129S1SvImJ_G0033604.1 mouse_genomes_project 8 47032350 47205814 - MGP_129S1SvImJ_P0088836 Wwc2 protein_coding protein_coding MGP_129S1SvImJ_T0090625.1 MGP_129S1SvImJ_G0034182.1 mouse_genomes_project 8 122758221 122786127 + MGP_129S1SvImJ_P0090625 Necab2 protein_coding protein_coding MGP_129S1SvImJ_T0090626.1 MGP_129S1SvImJ_G0034182.1 mouse_genomes_project 8 122758263 122785898 + Necab2 protein_coding processed_transcript MGP_129S1SvImJ_T0090627.1 MGP_129S1SvImJ_G0034182.1 mouse_genomes_project 8 122765922 122784432 + MGP_129S1SvImJ_P0090627 Necab2 protein_coding protein_coding MGP_129S1SvImJ_T0100141.1 MGP_129S1SvImJ_G0038208.1 mouse_genomes_project 8 114911533 114911640 + Gm22827 snRNA snRNA MGP_129S1SvImJ_T0101376.1 MGP_129S1SvImJ_G0039443.1 mouse_genomes_project 8 32152993 32154172 + Gm23123 snoRNA snoRNA MGP_129S1SvImJ_T0088751.1 MGP_129S1SvImJ_G0033580.1 mouse_genomes_project 8 45022121 45057828 - MGP_129S1SvImJ_P0088751 1700029J07Rik protein_coding protein_coding MGP_129S1SvImJ_T0088752.1 MGP_129S1SvImJ_G0033580.1 mouse_genomes_project 8 45022123 45057828 - MGP_129S1SvImJ_P0088752 1700029J07Rik protein_coding protein_coding MGP_129S1SvImJ_T0089084.1 MGP_129S1SvImJ_G0033678.1 mouse_genomes_project 8 70035507 70044393 + MGP_129S1SvImJ_P0089084 Lpar2 protein_coding protein_coding MGP_129S1SvImJ_T0089085.1 MGP_129S1SvImJ_G0033678.1 mouse_genomes_project 8 70035643 70044394 + MGP_129S1SvImJ_P0089085 Lpar2 protein_coding protein_coding MGP_129S1SvImJ_T0088712.1 MGP_129S1SvImJ_G0033572.1 mouse_genomes_project 8 44269615 44291019 - MGP_129S1SvImJ_P0088712 F11 protein_coding protein_coding MGP_129S1SvImJ_T0100133.1 MGP_129S1SvImJ_G0038200.1 mouse_genomes_project 8 98809758 98809860 + Gm25160 snRNA snRNA MGP_129S1SvImJ_T0011008.1 MGP_129S1SvImJ_G0009124.1 mouse_genomes_project 8 85084198 85084273 + Mir23a miRNA miRNA MGP_129S1SvImJ_T0005375.1 MGP_129S1SvImJ_G0004556.1 mouse_genomes_project 8 46179480 46190781 - 4930579M01Rik antisense antisense MGP_129S1SvImJ_T0015995.1 MGP_129S1SvImJ_G0014084.1 mouse_genomes_project 8 79515607 79517341 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009181.1 MGP_129S1SvImJ_G0007377.1 mouse_genomes_project 8 108593066 108789275 - Gm26786 lincRNA lincRNA MGP_129S1SvImJ_T0005383.1 MGP_129S1SvImJ_G0004563.1 mouse_genomes_project 8 66504225 66507584 - Gm15356 antisense antisense MGP_129S1SvImJ_T0091052.1 MGP_129S1SvImJ_G0034301.1 mouse_genomes_project 8 132647911 132701704 + MGP_129S1SvImJ_P0091052 Itgb1 protein_coding protein_coding MGP_129S1SvImJ_T0091053.1 MGP_129S1SvImJ_G0034301.1 mouse_genomes_project 8 132648014 132701121 + MGP_129S1SvImJ_P0091053 Itgb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091054.1 MGP_129S1SvImJ_G0034301.1 mouse_genomes_project 8 132648127 132679311 + Itgb1 protein_coding retained_intron MGP_129S1SvImJ_T0091055.1 MGP_129S1SvImJ_G0034301.1 mouse_genomes_project 8 132692836 132700893 + MGP_129S1SvImJ_P0091055 Itgb1 protein_coding protein_coding MGP_129S1SvImJ_T0088552.1 MGP_129S1SvImJ_G0033519.1 mouse_genomes_project 8 30369070 30433940 - MGP_129S1SvImJ_P0088552 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0011031.1 MGP_129S1SvImJ_G0009147.1 mouse_genomes_project 8 109513979 109514061 - Mir7075 miRNA miRNA MGP_129S1SvImJ_T0088612.1 MGP_129S1SvImJ_G0033542.1 mouse_genomes_project 8 34743138 34796252 + MGP_129S1SvImJ_P0088612 D8Ertd82e protein_coding protein_coding MGP_129S1SvImJ_T0088613.1 MGP_129S1SvImJ_G0033542.1 mouse_genomes_project 8 34743171 34754918 + D8Ertd82e protein_coding retained_intron MGP_129S1SvImJ_T0088614.1 MGP_129S1SvImJ_G0033542.1 mouse_genomes_project 8 34743171 34751055 + D8Ertd82e protein_coding retained_intron MGP_129S1SvImJ_T0010976.1 MGP_129S1SvImJ_G0009092.1 mouse_genomes_project 8 20992680 20992805 - Gm44365 miRNA miRNA MGP_129S1SvImJ_T0088295.1 MGP_129S1SvImJ_G0033412.1 mouse_genomes_project 8 16609812 16612602 + MGP_129S1SvImJ_P0088295 Defb34 protein_coding protein_coding MGP_129S1SvImJ_T0015953.1 MGP_129S1SvImJ_G0014042.1 mouse_genomes_project 8 10284360 10284564 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0088834.1 MGP_129S1SvImJ_G0033602.1 mouse_genomes_project 8 47026805 47027710 + MGP_129S1SvImJ_P0088834 protein_coding protein_coding MGP_129S1SvImJ_T0089957.1 MGP_129S1SvImJ_G0033942.1 mouse_genomes_project 8 94421184 94448438 - MGP_129S1SvImJ_P0089957 Ces1c protein_coding unknown_likely_coding MGP_129S1SvImJ_T0089958.1 MGP_129S1SvImJ_G0033942.1 mouse_genomes_project 8 94424119 94448451 - MGP_129S1SvImJ_P0089958 Ces1c protein_coding protein_coding MGP_129S1SvImJ_T0089959.1 MGP_129S1SvImJ_G0033942.1 mouse_genomes_project 8 94430988 94448463 - Ces1c protein_coding retained_intron MGP_129S1SvImJ_T0089960.1 MGP_129S1SvImJ_G0033942.1 mouse_genomes_project 8 94435753 94441893 - MGP_129S1SvImJ_P0089960 Ces1c protein_coding protein_coding MGP_129S1SvImJ_T0088261.1 MGP_129S1SvImJ_G0033400.1 mouse_genomes_project 8 12475500 12479967 - MGP_129S1SvImJ_P0088261 BB014433 protein_coding protein_coding MGP_129S1SvImJ_T0088262.1 MGP_129S1SvImJ_G0033400.1 mouse_genomes_project 8 12476348 12479976 - MGP_129S1SvImJ_P0088262 BB014433 protein_coding protein_coding MGP_129S1SvImJ_T0011029.1 MGP_129S1SvImJ_G0009145.1 mouse_genomes_project 8 107913144 107913252 + Mir1966 miRNA miRNA MGP_129S1SvImJ_T0088306.1 MGP_129S1SvImJ_G0033422.1 mouse_genomes_project 8 18656150 18661199 + MGP_129S1SvImJ_P0088306 Defb33 protein_coding protein_coding MGP_129S1SvImJ_T0091025.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 130939010 131522281 + MGP_129S1SvImJ_P0091025 Pard3 protein_coding protein_coding MGP_129S1SvImJ_T0091026.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 130939173 131338800 + MGP_129S1SvImJ_P0091026 Pard3 protein_coding protein_coding MGP_129S1SvImJ_T0091027.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 130939173 131522596 + MGP_129S1SvImJ_P0091027 Pard3 protein_coding protein_coding MGP_129S1SvImJ_T0091028.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 130939215 131317691 + Pard3 protein_coding retained_intron MGP_129S1SvImJ_T0091029.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 130939362 131522281 + MGP_129S1SvImJ_P0091029 Pard3 protein_coding protein_coding MGP_129S1SvImJ_T0091030.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 130939376 131175524 + MGP_129S1SvImJ_P0091030 Pard3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091031.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 130939376 131275207 + MGP_129S1SvImJ_P0091031 Pard3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091032.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 130939412 131521119 + MGP_129S1SvImJ_P0091032 Pard3 protein_coding protein_coding MGP_129S1SvImJ_T0091033.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 130939412 131521119 + MGP_129S1SvImJ_P0091033 Pard3 protein_coding protein_coding MGP_129S1SvImJ_T0091034.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 130939462 131332242 + MGP_129S1SvImJ_P0091034 Pard3 protein_coding protein_coding MGP_129S1SvImJ_T0091035.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 130939462 131380144 + MGP_129S1SvImJ_P0091035 Pard3 protein_coding protein_coding MGP_129S1SvImJ_T0091036.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 130939462 131332242 + MGP_129S1SvImJ_P0091036 Pard3 protein_coding protein_coding MGP_129S1SvImJ_T0091037.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 130939462 131332242 + MGP_129S1SvImJ_P0091037 Pard3 protein_coding protein_coding MGP_129S1SvImJ_T0091038.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 130939462 131522281 + MGP_129S1SvImJ_P0091038 Pard3 protein_coding protein_coding MGP_129S1SvImJ_T0091039.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 130939464 131332173 + MGP_129S1SvImJ_P0091039 Pard3 protein_coding protein_coding MGP_129S1SvImJ_T0091040.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 130939471 131308088 + MGP_129S1SvImJ_P0091040 Pard3 protein_coding protein_coding MGP_129S1SvImJ_T0091041.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 130948337 131332173 + MGP_129S1SvImJ_P0091041 Pard3 protein_coding protein_coding MGP_129S1SvImJ_T0091042.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 131198314 131339119 + MGP_129S1SvImJ_P0091042 Pard3 protein_coding protein_coding MGP_129S1SvImJ_T0091043.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 131261387 131266764 + Pard3 protein_coding retained_intron MGP_129S1SvImJ_T0091044.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 131262283 131304133 + MGP_129S1SvImJ_P0091044 Pard3 protein_coding protein_coding MGP_129S1SvImJ_T0091045.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 131276324 131281816 + Pard3 protein_coding retained_intron MGP_129S1SvImJ_T0091046.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 131294161 131306178 + MGP_129S1SvImJ_P0091046 Pard3 protein_coding protein_coding MGP_129S1SvImJ_T0091047.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 131310291 131339123 + MGP_129S1SvImJ_P0091047 Pard3 protein_coding protein_coding MGP_129S1SvImJ_T0091048.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 131316138 131380035 + Pard3 protein_coding retained_intron MGP_129S1SvImJ_T0091049.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 131353721 131380051 + MGP_129S1SvImJ_P0091049 Pard3 protein_coding protein_coding MGP_129S1SvImJ_T0091050.1 MGP_129S1SvImJ_G0034299.1 mouse_genomes_project 8 131488440 131521162 + Pard3 protein_coding processed_transcript MGP_129S1SvImJ_T0089040.1 MGP_129S1SvImJ_G0033664.1 mouse_genomes_project 8 69182267 69236154 - MGP_129S1SvImJ_P0089040 Slc18a1 protein_coding protein_coding MGP_129S1SvImJ_T0089041.1 MGP_129S1SvImJ_G0033664.1 mouse_genomes_project 8 69206484 69219611 - Slc18a1 protein_coding retained_intron MGP_129S1SvImJ_T0089042.1 MGP_129S1SvImJ_G0033664.1 mouse_genomes_project 8 69211545 69217888 - Slc18a1 protein_coding retained_intron MGP_129S1SvImJ_T0089043.1 MGP_129S1SvImJ_G0033664.1 mouse_genomes_project 8 69217480 69236167 - Slc18a1 protein_coding processed_transcript MGP_129S1SvImJ_T0089044.1 MGP_129S1SvImJ_G0033664.1 mouse_genomes_project 8 69217548 69236141 - Slc18a1 protein_coding processed_transcript MGP_129S1SvImJ_T0090033.1 MGP_129S1SvImJ_G0033966.1 mouse_genomes_project 8 96107111 96129446 - MGP_129S1SvImJ_P0090033 Pllp protein_coding protein_coding MGP_129S1SvImJ_T0002358.1 MGP_129S1SvImJ_G0002268.1 mouse_genomes_project 8 101779355 101781374 + TEC TEC MGP_129S1SvImJ_T0098401.1 MGP_129S1SvImJ_G0036486.1 mouse_genomes_project 8 126147085 126147471 + pseudogene pseudogene MGP_129S1SvImJ_T0090618.1 MGP_129S1SvImJ_G0034180.1 mouse_genomes_project 8 122706310 122721928 + MGP_129S1SvImJ_P0090618 Mlycd protein_coding protein_coding MGP_129S1SvImJ_T0090619.1 MGP_129S1SvImJ_G0034180.1 mouse_genomes_project 8 122706330 122721913 + Mlycd protein_coding retained_intron MGP_129S1SvImJ_T0088221.1 MGP_129S1SvImJ_G0033387.1 mouse_genomes_project 8 11152845 11166670 + MGP_129S1SvImJ_P0088221 Upf3a protein_coding protein_coding MGP_129S1SvImJ_T0005424.1 MGP_129S1SvImJ_G0004598.1 mouse_genomes_project 8 127472793 127475027 - 2810455O05Rik antisense antisense MGP_129S1SvImJ_T0088915.1 MGP_129S1SvImJ_G0033631.1 mouse_genomes_project 8 60771040 60789853 + MGP_129S1SvImJ_P0088915 Hpf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088916.1 MGP_129S1SvImJ_G0033631.1 mouse_genomes_project 8 60771067 60789851 + MGP_129S1SvImJ_P0088916 Hpf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088917.1 MGP_129S1SvImJ_G0033631.1 mouse_genomes_project 8 60771073 60789858 + MGP_129S1SvImJ_P0088917 Hpf1 protein_coding protein_coding MGP_129S1SvImJ_T0088918.1 MGP_129S1SvImJ_G0033631.1 mouse_genomes_project 8 60771073 60788263 + MGP_129S1SvImJ_P0088918 Hpf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0088919.1 MGP_129S1SvImJ_G0033631.1 mouse_genomes_project 8 60771111 60777675 + Hpf1 protein_coding retained_intron MGP_129S1SvImJ_T0098653.1 MGP_129S1SvImJ_G0036738.1 mouse_genomes_project 8 64177735 64177857 + Gm22586 rRNA rRNA MGP_129S1SvImJ_T0090638.1 MGP_129S1SvImJ_G0034187.1 mouse_genomes_project 8 122935015 122944235 - MGP_129S1SvImJ_P0090638 Taf1c protein_coding protein_coding MGP_129S1SvImJ_T0090639.1 MGP_129S1SvImJ_G0034187.1 mouse_genomes_project 8 122935015 122944235 - MGP_129S1SvImJ_P0090639 Taf1c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0090640.1 MGP_129S1SvImJ_G0034187.1 mouse_genomes_project 8 122935859 122936886 - Taf1c protein_coding processed_transcript MGP_129S1SvImJ_T0090641.1 MGP_129S1SvImJ_G0034187.1 mouse_genomes_project 8 122936427 122937754 - Taf1c protein_coding retained_intron MGP_129S1SvImJ_T0090642.1 MGP_129S1SvImJ_G0034187.1 mouse_genomes_project 8 122936668 122938619 - Taf1c protein_coding processed_transcript MGP_129S1SvImJ_T0089483.1 MGP_129S1SvImJ_G0033798.1 mouse_genomes_project 8 75933594 76509916 + MGP_129S1SvImJ_P0089483 1700007B14Rik protein_coding protein_coding MGP_129S1SvImJ_T0089484.1 MGP_129S1SvImJ_G0033798.1 mouse_genomes_project 8 75933883 76509941 + MGP_129S1SvImJ_P0089484 1700007B14Rik protein_coding protein_coding MGP_129S1SvImJ_T0090327.1 MGP_129S1SvImJ_G0034077.1 mouse_genomes_project 8 108497639 108511948 + MGP_129S1SvImJ_P0090327 Pla2g15 protein_coding protein_coding MGP_129S1SvImJ_T0005419.1 MGP_129S1SvImJ_G0004594.1 mouse_genomes_project 8 125337813 125339027 + Gm20406 antisense antisense MGP_129S1SvImJ_T0088303.1 MGP_129S1SvImJ_G0033419.1 mouse_genomes_project 8 16767876 16769821 + MGP_129S1SvImJ_P0088303 Defb3 protein_coding protein_coding MGP_129S1SvImJ_T0010991.1 MGP_129S1SvImJ_G0009107.1 mouse_genomes_project 8 67728556 67728649 - Gm44391 miRNA miRNA MGP_129S1SvImJ_T0088082.1 MGP_129S1SvImJ_G0033347.1 mouse_genomes_project 8 7114649 7129098 + MGP_129S1SvImJ_P0088082 Abhd13 protein_coding protein_coding MGP_129S1SvImJ_T0088083.1 MGP_129S1SvImJ_G0033347.1 mouse_genomes_project 8 7114659 7129098 + MGP_129S1SvImJ_P0088083 Abhd13 protein_coding protein_coding MGP_129S1SvImJ_T0089347.1 MGP_129S1SvImJ_G0033750.1 mouse_genomes_project 8 71896725 71915897 - MGP_129S1SvImJ_P0089347 Plvap protein_coding protein_coding MGP_129S1SvImJ_T0002368.1 MGP_129S1SvImJ_G0002278.1 mouse_genomes_project 8 127020751 127021404 - TEC TEC MGP_129S1SvImJ_T0090146.1 MGP_129S1SvImJ_G0034007.1 mouse_genomes_project 8 106452176 106461155 + MGP_129S1SvImJ_P0090146 Cmtm2b protein_coding protein_coding MGP_129S1SvImJ_T0005364.1 MGP_129S1SvImJ_G0004547.1 mouse_genomes_project 8 21036567 21047317 - Gm15816 antisense antisense MGP_129S1SvImJ_T0088944.1 MGP_129S1SvImJ_G0033636.1 mouse_genomes_project 8 61436196 61523176 - MGP_129S1SvImJ_P0088944 Palld protein_coding protein_coding MGP_129S1SvImJ_T0088945.1 MGP_129S1SvImJ_G0033636.1 mouse_genomes_project 8 61438015 61848725 - MGP_129S1SvImJ_P0088945 Palld protein_coding protein_coding MGP_129S1SvImJ_T0088946.1 MGP_129S1SvImJ_G0033636.1 mouse_genomes_project 8 61438021 61691993 - MGP_129S1SvImJ_P0088946 Palld protein_coding protein_coding MGP_129S1SvImJ_T0088947.1 MGP_129S1SvImJ_G0033636.1 mouse_genomes_project 8 61439692 61440668 - Palld protein_coding retained_intron MGP_129S1SvImJ_T0088948.1 MGP_129S1SvImJ_G0033636.1 mouse_genomes_project 8 61439788 61848746 - MGP_129S1SvImJ_P0088948 Palld protein_coding protein_coding MGP_129S1SvImJ_T0088949.1 MGP_129S1SvImJ_G0033636.1 mouse_genomes_project 8 61440680 61519348 - MGP_129S1SvImJ_P0088949 Palld protein_coding protein_coding MGP_129S1SvImJ_T0088950.1 MGP_129S1SvImJ_G0033636.1 mouse_genomes_project 8 61449890 61460459 - Palld protein_coding retained_intron MGP_129S1SvImJ_T0088951.1 MGP_129S1SvImJ_G0033636.1 mouse_genomes_project 8 61615728 61692002 - Palld protein_coding retained_intron MGP_129S1SvImJ_T0088952.1 MGP_129S1SvImJ_G0033636.1 mouse_genomes_project 8 61639462 61691993 - Palld protein_coding retained_intron MGP_129S1SvImJ_T0098654.1 MGP_129S1SvImJ_G0036739.1 mouse_genomes_project 8 72584601 72584688 + Gm24747 rRNA rRNA MGP_129S1SvImJ_T0090344.1 MGP_129S1SvImJ_G0034086.1 mouse_genomes_project 8 109036243 109231750 + MGP_129S1SvImJ_P0090344 Tango6 protein_coding protein_coding MGP_129S1SvImJ_T0090185.1 MGP_129S1SvImJ_G0034023.1 mouse_genomes_project 8 107155690 107164358 + MGP_129S1SvImJ_P0090185 Ces2g protein_coding protein_coding MGP_129S1SvImJ_T0090186.1 MGP_129S1SvImJ_G0034023.1 mouse_genomes_project 8 107155755 107164349 + MGP_129S1SvImJ_P0090186 Ces2g protein_coding unknown_likely_coding MGP_129S1SvImJ_T0090378.1 MGP_129S1SvImJ_G0034098.1 mouse_genomes_project 8 109574890 109620368 + MGP_129S1SvImJ_P0090378 Cyb5b protein_coding protein_coding MGP_129S1SvImJ_T0089782.1 MGP_129S1SvImJ_G0033887.1 mouse_genomes_project 8 85963961 85971138 - MGP_129S1SvImJ_P0089782 Asna1 protein_coding protein_coding MGP_129S1SvImJ_T0090304.1 MGP_129S1SvImJ_G0034072.1 mouse_genomes_project 8 108313681 108320478 - MGP_129S1SvImJ_P0090304 Dpep2 protein_coding protein_coding MGP_129S1SvImJ_T0090305.1 MGP_129S1SvImJ_G0034072.1 mouse_genomes_project 8 108313682 108328730 - MGP_129S1SvImJ_P0090305 Dpep2 protein_coding protein_coding MGP_129S1SvImJ_T0090306.1 MGP_129S1SvImJ_G0034072.1 mouse_genomes_project 8 108313687 108320488 - MGP_129S1SvImJ_P0090306 Dpep2 protein_coding protein_coding MGP_129S1SvImJ_T0090307.1 MGP_129S1SvImJ_G0034072.1 mouse_genomes_project 8 108316484 108320451 - Dpep2 protein_coding retained_intron MGP_129S1SvImJ_T0090308.1 MGP_129S1SvImJ_G0034072.1 mouse_genomes_project 8 108317236 108320479 - Dpep2 protein_coding retained_intron MGP_129S1SvImJ_T0090987.1 MGP_129S1SvImJ_G0034283.1 mouse_genomes_project 8 128625329 128670044 - MGP_129S1SvImJ_P0090987 Egln1 protein_coding protein_coding MGP_129S1SvImJ_T0090099.1 MGP_129S1SvImJ_G0033990.1 mouse_genomes_project 8 97123550 97136154 + MGP_129S1SvImJ_P0090099 Gins3 protein_coding protein_coding MGP_129S1SvImJ_T0090129.1 MGP_129S1SvImJ_G0033998.1 mouse_genomes_project 8 104535231 104552532 - MGP_129S1SvImJ_P0090129 protein_coding protein_coding MGP_129S1SvImJ_T0090340.1 MGP_129S1SvImJ_G0034084.1 mouse_genomes_project 8 108854208 108903122 + MGP_129S1SvImJ_P0090340 Cdh3 protein_coding protein_coding MGP_129S1SvImJ_T0018625.1 MGP_129S1SvImJ_G0015763.1 mouse_genomes_project 9 116778674 116788494 + processed_transcript processed_transcript MGP_129S1SvImJ_T0018626.1 MGP_129S1SvImJ_G0015763.1 mouse_genomes_project 9 116778702 116787711 + processed_transcript processed_transcript MGP_129S1SvImJ_T0018627.1 MGP_129S1SvImJ_G0015763.1 mouse_genomes_project 9 116778794 116781556 + processed_transcript processed_transcript MGP_129S1SvImJ_T0016056.1 MGP_129S1SvImJ_G0014145.1 mouse_genomes_project 9 56523256 56523937 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005546.1 MGP_129S1SvImJ_G0004682.1 mouse_genomes_project 9 108457192 108459823 + Gm28111 antisense antisense MGP_129S1SvImJ_T0091657.1 MGP_129S1SvImJ_G0034531.1 mouse_genomes_project 9 33004767 33017873 + Srpr protein_coding processed_transcript MGP_129S1SvImJ_T0091670.1 MGP_129S1SvImJ_G0034531.1 mouse_genomes_project 9 33015487 33021562 + MGP_129S1SvImJ_P0091670 Srpr protein_coding protein_coding MGP_129S1SvImJ_T0091671.1 MGP_129S1SvImJ_G0034531.1 mouse_genomes_project 9 33016230 33017188 + Srpr protein_coding retained_intron MGP_129S1SvImJ_T0091672.1 MGP_129S1SvImJ_G0034531.1 mouse_genomes_project 9 33019235 33052351 + MGP_129S1SvImJ_P0091672 Srpr protein_coding protein_coding MGP_129S1SvImJ_T0093040.1 MGP_129S1SvImJ_G0034999.1 mouse_genomes_project 9 70479462 70493068 - MGP_129S1SvImJ_P0093040 Ccnb2 protein_coding protein_coding MGP_129S1SvImJ_T0093883.1 MGP_129S1SvImJ_G0035186.1 mouse_genomes_project 9 104069158 104110893 + MGP_129S1SvImJ_P0093883 Ky protein_coding protein_coding MGP_129S1SvImJ_T0093884.1 MGP_129S1SvImJ_G0035186.1 mouse_genomes_project 9 104085084 104091777 + Ky protein_coding retained_intron MGP_129S1SvImJ_T0092816.1 MGP_129S1SvImJ_G0034942.1 mouse_genomes_project 9 64058741 64389208 + MGP_129S1SvImJ_P0092816 Megf11 protein_coding protein_coding MGP_129S1SvImJ_T0092817.1 MGP_129S1SvImJ_G0034942.1 mouse_genomes_project 9 64058741 64380978 + MGP_129S1SvImJ_P0092817 Megf11 protein_coding protein_coding MGP_129S1SvImJ_T0092818.1 MGP_129S1SvImJ_G0034942.1 mouse_genomes_project 9 64058741 64387293 + MGP_129S1SvImJ_P0092818 Megf11 protein_coding protein_coding MGP_129S1SvImJ_T0092819.1 MGP_129S1SvImJ_G0034942.1 mouse_genomes_project 9 64058798 64329326 + Megf11 protein_coding retained_intron MGP_129S1SvImJ_T0092820.1 MGP_129S1SvImJ_G0034942.1 mouse_genomes_project 9 64163632 64391441 + MGP_129S1SvImJ_P0092820 Megf11 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0092821.1 MGP_129S1SvImJ_G0034942.1 mouse_genomes_project 9 64169921 64177657 + Megf11 protein_coding processed_transcript MGP_129S1SvImJ_T0092822.1 MGP_129S1SvImJ_G0034942.1 mouse_genomes_project 9 64170186 64367757 + Megf11 protein_coding retained_intron MGP_129S1SvImJ_T0092823.1 MGP_129S1SvImJ_G0034942.1 mouse_genomes_project 9 64217099 64315531 + Megf11 protein_coding processed_transcript MGP_129S1SvImJ_T0092824.1 MGP_129S1SvImJ_G0034942.1 mouse_genomes_project 9 64339981 64372409 + MGP_129S1SvImJ_P0092824 Megf11 protein_coding protein_coding MGP_129S1SvImJ_T0092825.1 MGP_129S1SvImJ_G0034942.1 mouse_genomes_project 9 64373784 64385936 + Megf11 protein_coding processed_transcript MGP_129S1SvImJ_T0009304.1 MGP_129S1SvImJ_G0007477.1 mouse_genomes_project 9 91813392 91817937 - Gm28703 lincRNA lincRNA MGP_129S1SvImJ_T0092427.1 MGP_129S1SvImJ_G0034834.1 mouse_genomes_project 9 54019572 54026807 + MGP_129S1SvImJ_P0092427 Psma4 protein_coding protein_coding MGP_129S1SvImJ_T0092428.1 MGP_129S1SvImJ_G0034834.1 mouse_genomes_project 9 54019580 54025166 + Psma4 protein_coding retained_intron MGP_129S1SvImJ_T0092429.1 MGP_129S1SvImJ_G0034834.1 mouse_genomes_project 9 54019587 54023815 + Psma4 protein_coding retained_intron MGP_129S1SvImJ_T0092430.1 MGP_129S1SvImJ_G0034834.1 mouse_genomes_project 9 54019597 54021589 + Psma4 protein_coding processed_transcript MGP_129S1SvImJ_T0092431.1 MGP_129S1SvImJ_G0034834.1 mouse_genomes_project 9 54019597 54025711 + MGP_129S1SvImJ_P0092431 Psma4 protein_coding protein_coding MGP_129S1SvImJ_T0092432.1 MGP_129S1SvImJ_G0034834.1 mouse_genomes_project 9 54019672 54022209 + Psma4 protein_coding retained_intron MGP_129S1SvImJ_T0092433.1 MGP_129S1SvImJ_G0034834.1 mouse_genomes_project 9 54019886 54025079 + MGP_129S1SvImJ_P0092433 Psma4 protein_coding protein_coding MGP_129S1SvImJ_T0099025.1 MGP_129S1SvImJ_G0037097.1 mouse_genomes_project 9 110552122 110552764 - Gm38163 sense_intronic sense_intronic MGP_129S1SvImJ_T0016045.1 MGP_129S1SvImJ_G0014134.1 mouse_genomes_project 9 34452632 34453024 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0093583.1 MGP_129S1SvImJ_G0035120.1 mouse_genomes_project 9 91026115 91051158 - Morf4l1 protein_coding retained_intron MGP_129S1SvImJ_T0093584.1 MGP_129S1SvImJ_G0035120.1 mouse_genomes_project 9 91026762 91051093 - MGP_129S1SvImJ_P0093584 Morf4l1 protein_coding protein_coding MGP_129S1SvImJ_T0093585.1 MGP_129S1SvImJ_G0035120.1 mouse_genomes_project 9 91026846 91050807 - Morf4l1 protein_coding processed_transcript MGP_129S1SvImJ_T0093586.1 MGP_129S1SvImJ_G0035120.1 mouse_genomes_project 9 91028623 91030331 - Morf4l1 protein_coding retained_intron MGP_129S1SvImJ_T0093587.1 MGP_129S1SvImJ_G0035120.1 mouse_genomes_project 9 91031395 91032302 - Morf4l1 protein_coding retained_intron MGP_129S1SvImJ_T0093588.1 MGP_129S1SvImJ_G0035120.1 mouse_genomes_project 9 91032298 91051047 - Morf4l1 protein_coding processed_transcript MGP_129S1SvImJ_T0093589.1 MGP_129S1SvImJ_G0035120.1 mouse_genomes_project 9 91036323 91051128 - Morf4l1 protein_coding retained_intron MGP_129S1SvImJ_T0093590.1 MGP_129S1SvImJ_G0035120.1 mouse_genomes_project 9 91044164 91051101 - Morf4l1 protein_coding retained_intron MGP_129S1SvImJ_T0011117.1 MGP_129S1SvImJ_G0009233.1 mouse_genomes_project 9 110010562 110010648 + Mir7088 miRNA miRNA MGP_129S1SvImJ_T0095022.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114327205 114457732 - MGP_129S1SvImJ_P0095022 Arpp21 protein_coding protein_coding MGP_129S1SvImJ_T0095023.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114327205 114459765 - MGP_129S1SvImJ_P0095023 Arpp21 protein_coding protein_coding MGP_129S1SvImJ_T0095024.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114327205 114457962 - MGP_129S1SvImJ_P0095024 Arpp21 protein_coding protein_coding MGP_129S1SvImJ_T0095025.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114327205 114459765 - MGP_129S1SvImJ_P0095025 Arpp21 protein_coding protein_coding MGP_129S1SvImJ_T0095026.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114327348 114457775 - MGP_129S1SvImJ_P0095026 Arpp21 protein_coding protein_coding MGP_129S1SvImJ_T0095027.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114327350 114511037 - Arpp21 protein_coding retained_intron MGP_129S1SvImJ_T0095028.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114327372 114511630 - MGP_129S1SvImJ_P0095028 Arpp21 protein_coding protein_coding MGP_129S1SvImJ_T0095029.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114327374 114509110 - MGP_129S1SvImJ_P0095029 Arpp21 protein_coding protein_coding MGP_129S1SvImJ_T0095030.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114327851 114459646 - MGP_129S1SvImJ_P0095030 Arpp21 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095031.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114379274 114494003 - MGP_129S1SvImJ_P0095031 Arpp21 protein_coding protein_coding MGP_129S1SvImJ_T0095032.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114424501 114511455 - Arpp21 protein_coding retained_intron MGP_129S1SvImJ_T0095033.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114425514 114511630 - MGP_129S1SvImJ_P0095033 Arpp21 protein_coding protein_coding MGP_129S1SvImJ_T0095034.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114430883 114494093 - MGP_129S1SvImJ_P0095034 Arpp21 protein_coding protein_coding MGP_129S1SvImJ_T0095035.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114447649 114510240 - Arpp21 protein_coding retained_intron MGP_129S1SvImJ_T0095036.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114451126 114494068 - MGP_129S1SvImJ_P0095036 Arpp21 protein_coding protein_coding MGP_129S1SvImJ_T0095037.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114451172 114494068 - MGP_129S1SvImJ_P0095037 Arpp21 protein_coding protein_coding MGP_129S1SvImJ_T0095038.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114451210 114510429 - MGP_129S1SvImJ_P0095038 Arpp21 protein_coding protein_coding MGP_129S1SvImJ_T0095039.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114452090 114459925 - MGP_129S1SvImJ_P0095039 Arpp21 protein_coding protein_coding MGP_129S1SvImJ_T0095040.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114452090 114459928 - MGP_129S1SvImJ_P0095040 Arpp21 protein_coding protein_coding MGP_129S1SvImJ_T0095041.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114453030 114459903 - Arpp21 protein_coding retained_intron MGP_129S1SvImJ_T0095042.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114453036 114459948 - Arpp21 protein_coding processed_transcript MGP_129S1SvImJ_T0095043.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114453065 114459925 - Arpp21 protein_coding processed_transcript MGP_129S1SvImJ_T0095044.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114454710 114459879 - Arpp21 protein_coding retained_intron MGP_129S1SvImJ_T0095045.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114454740 114458106 - Arpp21 protein_coding processed_transcript MGP_129S1SvImJ_T0095046.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114454783 114457962 - Arpp21 protein_coding processed_transcript MGP_129S1SvImJ_T0095047.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114455037 114457949 - Arpp21 protein_coding retained_intron MGP_129S1SvImJ_T0095048.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114457740 114508511 - Arpp21 protein_coding processed_transcript MGP_129S1SvImJ_T0095049.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114459590 114510486 - Arpp21 protein_coding processed_transcript MGP_129S1SvImJ_T0095050.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114459627 114512552 - Arpp21 protein_coding processed_transcript MGP_129S1SvImJ_T0095051.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114459660 114460439 - Arpp21 protein_coding processed_transcript MGP_129S1SvImJ_T0095052.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114459928 114460473 - Arpp21 protein_coding processed_transcript MGP_129S1SvImJ_T0095053.1 MGP_129S1SvImJ_G0035376.1 mouse_genomes_project 9 114478294 114494046 - Arpp21 protein_coding retained_intron MGP_129S1SvImJ_T0101494.1 MGP_129S1SvImJ_G0039561.1 mouse_genomes_project 9 110387749 110387858 - Gm25456 snoRNA snoRNA MGP_129S1SvImJ_T0098669.1 MGP_129S1SvImJ_G0036754.1 mouse_genomes_project 9 97754044 97754160 - n-R5s87 rRNA rRNA MGP_129S1SvImJ_T0016037.1 MGP_129S1SvImJ_G0014126.1 mouse_genomes_project 9 28942565 28942943 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011067.1 MGP_129S1SvImJ_G0009183.1 mouse_genomes_project 9 18213404 18213482 - Mir1900 miRNA miRNA MGP_129S1SvImJ_T0092118.1 MGP_129S1SvImJ_G0034731.1 mouse_genomes_project 9 43660789 43674797 + MGP_129S1SvImJ_P0092118 Scn2b protein_coding protein_coding MGP_129S1SvImJ_T0092119.1 MGP_129S1SvImJ_G0034731.1 mouse_genomes_project 9 43660794 43674795 + MGP_129S1SvImJ_P0092119 Scn2b protein_coding protein_coding MGP_129S1SvImJ_T0092358.1 MGP_129S1SvImJ_G0034807.1 mouse_genomes_project 9 52095222 52253820 - MGP_129S1SvImJ_P0092358 Ddx10 protein_coding protein_coding MGP_129S1SvImJ_T0002416.1 MGP_129S1SvImJ_G0002326.1 mouse_genomes_project 9 83779556 83782361 + TEC TEC MGP_129S1SvImJ_T0100202.1 MGP_129S1SvImJ_G0038269.1 mouse_genomes_project 9 89407553 89407669 - Gm22985 snRNA snRNA MGP_129S1SvImJ_T0005567.1 MGP_129S1SvImJ_G0004698.1 mouse_genomes_project 9 111575348 111594410 + antisense antisense MGP_129S1SvImJ_T0094579.1 MGP_129S1SvImJ_G0035302.1 mouse_genomes_project 9 110468724 110476953 + MGP_129S1SvImJ_P0094579 Qars protein_coding protein_coding MGP_129S1SvImJ_T0094580.1 MGP_129S1SvImJ_G0035302.1 mouse_genomes_project 9 110469069 110472099 + Qars protein_coding retained_intron MGP_129S1SvImJ_T0094581.1 MGP_129S1SvImJ_G0035302.1 mouse_genomes_project 9 110469069 110473210 + Qars protein_coding retained_intron MGP_129S1SvImJ_T0094582.1 MGP_129S1SvImJ_G0035302.1 mouse_genomes_project 9 110469069 110472083 + Qars protein_coding retained_intron MGP_129S1SvImJ_T0094583.1 MGP_129S1SvImJ_G0035302.1 mouse_genomes_project 9 110469082 110476948 + MGP_129S1SvImJ_P0094583 Qars protein_coding protein_coding MGP_129S1SvImJ_T0094584.1 MGP_129S1SvImJ_G0035302.1 mouse_genomes_project 9 110470490 110476948 + MGP_129S1SvImJ_P0094584 Qars protein_coding protein_coding MGP_129S1SvImJ_T0094585.1 MGP_129S1SvImJ_G0035302.1 mouse_genomes_project 9 110472561 110474409 + Qars protein_coding retained_intron MGP_129S1SvImJ_T0094586.1 MGP_129S1SvImJ_G0035302.1 mouse_genomes_project 9 110472621 110473903 + Qars protein_coding retained_intron MGP_129S1SvImJ_T0094587.1 MGP_129S1SvImJ_G0035302.1 mouse_genomes_project 9 110474117 110475198 + Qars protein_coding retained_intron MGP_129S1SvImJ_T0094588.1 MGP_129S1SvImJ_G0035302.1 mouse_genomes_project 9 110474120 110476170 + MGP_129S1SvImJ_P0094588 Qars protein_coding protein_coding MGP_129S1SvImJ_T0094589.1 MGP_129S1SvImJ_G0035302.1 mouse_genomes_project 9 110474141 110474975 + Qars protein_coding processed_transcript MGP_129S1SvImJ_T0094590.1 MGP_129S1SvImJ_G0035302.1 mouse_genomes_project 9 110474555 110475142 + Qars protein_coding retained_intron MGP_129S1SvImJ_T0094591.1 MGP_129S1SvImJ_G0035302.1 mouse_genomes_project 9 110474737 110475370 + Qars protein_coding retained_intron MGP_129S1SvImJ_T0094592.1 MGP_129S1SvImJ_G0035302.1 mouse_genomes_project 9 110475075 110476948 + MGP_129S1SvImJ_P0094592 Qars protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094593.1 MGP_129S1SvImJ_G0035302.1 mouse_genomes_project 9 110475759 110476207 + Qars protein_coding retained_intron MGP_129S1SvImJ_T0094594.1 MGP_129S1SvImJ_G0035302.1 mouse_genomes_project 9 110475762 110476941 + Qars protein_coding retained_intron MGP_129S1SvImJ_T0094595.1 MGP_129S1SvImJ_G0035302.1 mouse_genomes_project 9 110475830 110476948 + Qars protein_coding retained_intron MGP_129S1SvImJ_T0002459.1 MGP_129S1SvImJ_G0002368.1 mouse_genomes_project 9 103525846 103526894 + TEC TEC MGP_129S1SvImJ_T0016026.1 MGP_129S1SvImJ_G0014115.1 mouse_genomes_project 9 11805746 11807167 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009244.1 MGP_129S1SvImJ_G0007430.1 mouse_genomes_project 9 42973706 42975464 + C030014I23Rik lincRNA lincRNA MGP_129S1SvImJ_T0009245.1 MGP_129S1SvImJ_G0007430.1 mouse_genomes_project 9 42974559 42977911 + C030014I23Rik lincRNA lincRNA MGP_129S1SvImJ_T0091604.1 MGP_129S1SvImJ_G0034518.1 mouse_genomes_project 9 28948205 29006724 + MGP_129S1SvImJ_P0091604 Prdm10 protein_coding protein_coding MGP_129S1SvImJ_T0091605.1 MGP_129S1SvImJ_G0034518.1 mouse_genomes_project 9 28987249 29065682 + MGP_129S1SvImJ_P0091605 Prdm10 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091606.1 MGP_129S1SvImJ_G0034518.1 mouse_genomes_project 9 28989548 29006713 + Prdm10 protein_coding retained_intron MGP_129S1SvImJ_T0091607.1 MGP_129S1SvImJ_G0034518.1 mouse_genomes_project 9 28989877 29062489 + MGP_129S1SvImJ_P0091607 Prdm10 protein_coding protein_coding MGP_129S1SvImJ_T0011087.1 MGP_129S1SvImJ_G0009203.1 mouse_genomes_project 9 50018931 50019015 - Mir34b miRNA miRNA MGP_129S1SvImJ_T0011760.1 MGP_129S1SvImJ_G0009876.1 mouse_genomes_project 9 78646264 78646595 - Rn7sk misc_RNA misc_RNA MGP_129S1SvImJ_T0002437.1 MGP_129S1SvImJ_G0002346.1 mouse_genomes_project 9 92785392 92786217 - TEC TEC MGP_129S1SvImJ_T0093566.1 MGP_129S1SvImJ_G0035117.1 mouse_genomes_project 9 90654250 90667457 - MGP_129S1SvImJ_P0093566 Ankrd34c protein_coding protein_coding MGP_129S1SvImJ_T0093567.1 MGP_129S1SvImJ_G0035117.1 mouse_genomes_project 9 90657468 90667427 - MGP_129S1SvImJ_P0093567 Ankrd34c protein_coding protein_coding MGP_129S1SvImJ_T0095055.1 MGP_129S1SvImJ_G0035378.1 mouse_genomes_project 9 116015082 116072932 - MGP_129S1SvImJ_P0095055 Pdcd6ip protein_coding protein_coding MGP_129S1SvImJ_T0095056.1 MGP_129S1SvImJ_G0035378.1 mouse_genomes_project 9 116017810 116072917 - MGP_129S1SvImJ_P0095056 Pdcd6ip protein_coding protein_coding MGP_129S1SvImJ_T0095057.1 MGP_129S1SvImJ_G0035378.1 mouse_genomes_project 9 116018904 116020629 - Pdcd6ip protein_coding retained_intron MGP_129S1SvImJ_T0095058.1 MGP_129S1SvImJ_G0035378.1 mouse_genomes_project 9 116022969 116025749 - Pdcd6ip protein_coding retained_intron MGP_129S1SvImJ_T0095059.1 MGP_129S1SvImJ_G0035378.1 mouse_genomes_project 9 116037754 116048935 - Pdcd6ip protein_coding processed_transcript MGP_129S1SvImJ_T0095060.1 MGP_129S1SvImJ_G0035378.1 mouse_genomes_project 9 116051032 116062578 - Pdcd6ip protein_coding retained_intron MGP_129S1SvImJ_T0095298.1 MGP_129S1SvImJ_G0035453.1 mouse_genomes_project 9 124864746 124877953 + MGP_129S1SvImJ_P0095298 Ackr2 protein_coding protein_coding MGP_129S1SvImJ_T0092554.1 MGP_129S1SvImJ_G0034876.1 mouse_genomes_project 9 56927388 56933695 + MGP_129S1SvImJ_P0092554 Cyp1a1 protein_coding protein_coding MGP_129S1SvImJ_T0093206.1 MGP_129S1SvImJ_G0035032.1 mouse_genomes_project 9 75218480 75309221 + MGP_129S1SvImJ_P0093206 Fam214a protein_coding protein_coding MGP_129S1SvImJ_T0093207.1 MGP_129S1SvImJ_G0035032.1 mouse_genomes_project 9 75242502 75309221 + MGP_129S1SvImJ_P0093207 Fam214a protein_coding protein_coding MGP_129S1SvImJ_T0091196.1 MGP_129S1SvImJ_G0034350.1 mouse_genomes_project 9 11441326 11451998 + MGP_129S1SvImJ_P0091196 Cwc15 protein_coding protein_coding MGP_129S1SvImJ_T0101456.1 MGP_129S1SvImJ_G0039523.1 mouse_genomes_project 9 51277053 51277186 + Gm25562 snoRNA snoRNA MGP_129S1SvImJ_T0092436.1 MGP_129S1SvImJ_G0034836.1 mouse_genomes_project 9 54090743 54106017 - MGP_129S1SvImJ_P0092436 Chrna3 protein_coding protein_coding MGP_129S1SvImJ_T0091197.1 MGP_129S1SvImJ_G0034351.1 mouse_genomes_project 9 11495699 11561082 - MGP_129S1SvImJ_P0091197 Amotl1 protein_coding protein_coding MGP_129S1SvImJ_T0091198.1 MGP_129S1SvImJ_G0034351.1 mouse_genomes_project 9 11503631 11507010 - Amotl1 protein_coding retained_intron MGP_129S1SvImJ_T0091199.1 MGP_129S1SvImJ_G0034351.1 mouse_genomes_project 9 11540061 11561783 - MGP_129S1SvImJ_P0091199 Amotl1 protein_coding protein_coding MGP_129S1SvImJ_T0091200.1 MGP_129S1SvImJ_G0034351.1 mouse_genomes_project 9 11540095 11560886 - MGP_129S1SvImJ_P0091200 Amotl1 protein_coding protein_coding MGP_129S1SvImJ_T0002470.1 MGP_129S1SvImJ_G0002379.1 mouse_genomes_project 9 105918151 105919664 + TEC TEC MGP_129S1SvImJ_T0094903.1 MGP_129S1SvImJ_G0035351.1 mouse_genomes_project 9 112786924 112790242 - MGP_129S1SvImJ_P0094903 Nradd protein_coding protein_coding MGP_129S1SvImJ_T0094904.1 MGP_129S1SvImJ_G0035351.1 mouse_genomes_project 9 112787297 112789112 - MGP_129S1SvImJ_P0094904 Nradd protein_coding protein_coding MGP_129S1SvImJ_T0094905.1 MGP_129S1SvImJ_G0035351.1 mouse_genomes_project 9 112787674 112790168 - MGP_129S1SvImJ_P0094905 Nradd protein_coding protein_coding MGP_129S1SvImJ_T0094906.1 MGP_129S1SvImJ_G0035351.1 mouse_genomes_project 9 112788369 112790221 - Nradd protein_coding retained_intron MGP_129S1SvImJ_T0011063.1 MGP_129S1SvImJ_G0009179.1 mouse_genomes_project 9 12298137 12298204 + miRNA miRNA MGP_129S1SvImJ_T0100189.1 MGP_129S1SvImJ_G0038256.1 mouse_genomes_project 9 70604915 70605022 - Gm23730 snRNA snRNA MGP_129S1SvImJ_T0005501.1 MGP_129S1SvImJ_G0004652.1 mouse_genomes_project 9 80218270 80220402 + 4930562D21Rik antisense antisense MGP_129S1SvImJ_T0002483.1 MGP_129S1SvImJ_G0002392.1 mouse_genomes_project 9 110509955 110512021 + TEC TEC MGP_129S1SvImJ_T0091801.1 MGP_129S1SvImJ_G0034575.1 mouse_genomes_project 9 35825839 35826887 + MGP_129S1SvImJ_P0091801 Olfr876 protein_coding protein_coding MGP_129S1SvImJ_T0091404.1 MGP_129S1SvImJ_G0034445.1 mouse_genomes_project 9 18436392 18442973 - MGP_129S1SvImJ_P0091404 S1pr5 protein_coding protein_coding MGP_129S1SvImJ_T0092189.1 MGP_129S1SvImJ_G0034751.1 mouse_genomes_project 9 44900981 44904268 + MGP_129S1SvImJ_P0092189 Apoa5 protein_coding protein_coding MGP_129S1SvImJ_T0092190.1 MGP_129S1SvImJ_G0034751.1 mouse_genomes_project 9 44901426 44904268 + MGP_129S1SvImJ_P0092190 Apoa5 protein_coding protein_coding MGP_129S1SvImJ_T0094068.1 MGP_129S1SvImJ_G0035218.1 mouse_genomes_project 9 107607910 107725200 - MGP_129S1SvImJ_P0094068 Col6a5 protein_coding protein_coding MGP_129S1SvImJ_T0094069.1 MGP_129S1SvImJ_G0035218.1 mouse_genomes_project 9 107610448 107725200 - MGP_129S1SvImJ_P0094069 Col6a5 protein_coding protein_coding MGP_129S1SvImJ_T0094070.1 MGP_129S1SvImJ_G0035218.1 mouse_genomes_project 9 107627643 107633733 - Col6a5 protein_coding retained_intron MGP_129S1SvImJ_T0094754.1 MGP_129S1SvImJ_G0035325.1 mouse_genomes_project 9 111032716 111040930 - MGP_129S1SvImJ_P0094754 Tma7 protein_coding protein_coding MGP_129S1SvImJ_T0094755.1 MGP_129S1SvImJ_G0035325.1 mouse_genomes_project 9 111036039 111041139 - MGP_129S1SvImJ_P0094755 Tma7 protein_coding protein_coding MGP_129S1SvImJ_T0094756.1 MGP_129S1SvImJ_G0035325.1 mouse_genomes_project 9 111040615 111040917 - Tma7 protein_coding retained_intron MGP_129S1SvImJ_T0011084.1 MGP_129S1SvImJ_G0009200.1 mouse_genomes_project 9 44545371 44545441 - Mir7087 miRNA miRNA MGP_129S1SvImJ_T0091454.1 MGP_129S1SvImJ_G0034459.1 mouse_genomes_project 9 18853108 18947666 + MGP_129S1SvImJ_P0091454 Smarca4 protein_coding protein_coding MGP_129S1SvImJ_T0091455.1 MGP_129S1SvImJ_G0034459.1 mouse_genomes_project 9 18853108 18947653 + MGP_129S1SvImJ_P0091455 Smarca4 protein_coding protein_coding MGP_129S1SvImJ_T0091456.1 MGP_129S1SvImJ_G0034459.1 mouse_genomes_project 9 18853203 18946802 + MGP_129S1SvImJ_P0091456 Smarca4 protein_coding protein_coding MGP_129S1SvImJ_T0091457.1 MGP_129S1SvImJ_G0034459.1 mouse_genomes_project 9 18874701 18926585 + MGP_129S1SvImJ_P0091457 Smarca4 protein_coding protein_coding MGP_129S1SvImJ_T0011079.1 MGP_129S1SvImJ_G0009195.1 mouse_genomes_project 9 39880956 39881033 + Mir125b-1 miRNA miRNA MGP_129S1SvImJ_T0091311.1 MGP_129S1SvImJ_G0034410.1 mouse_genomes_project 9 17234426 17370870 + MGP_129S1SvImJ_P0091311 Olfr872 protein_coding protein_coding MGP_129S1SvImJ_T0095189.1 MGP_129S1SvImJ_G0035420.1 mouse_genomes_project 9 122221118 122246452 + MGP_129S1SvImJ_P0095189 Exog protein_coding protein_coding MGP_129S1SvImJ_T0095190.1 MGP_129S1SvImJ_G0035420.1 mouse_genomes_project 9 122221146 122245165 + MGP_129S1SvImJ_P0095190 Exog protein_coding protein_coding MGP_129S1SvImJ_T0009341.1 MGP_129S1SvImJ_G0007507.1 mouse_genomes_project 9 110534898 110536540 + 4833445I07Rik lincRNA lincRNA MGP_129S1SvImJ_T0009342.1 MGP_129S1SvImJ_G0007507.1 mouse_genomes_project 9 110535258 110536140 + 4833445I07Rik lincRNA lincRNA MGP_129S1SvImJ_T0093047.1 MGP_129S1SvImJ_G0035004.1 mouse_genomes_project 9 70787425 70889743 + MGP_129S1SvImJ_P0093047 Adam10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093048.1 MGP_129S1SvImJ_G0035004.1 mouse_genomes_project 9 70787425 70891590 + MGP_129S1SvImJ_P0093048 Adam10 protein_coding protein_coding MGP_129S1SvImJ_T0093049.1 MGP_129S1SvImJ_G0035004.1 mouse_genomes_project 9 70787444 70857622 + MGP_129S1SvImJ_P0093049 Adam10 protein_coding protein_coding MGP_129S1SvImJ_T0093050.1 MGP_129S1SvImJ_G0035004.1 mouse_genomes_project 9 70887414 70889739 + Adam10 protein_coding retained_intron MGP_129S1SvImJ_T0016079.1 MGP_129S1SvImJ_G0014168.1 mouse_genomes_project 9 74619992 74620470 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101427.1 MGP_129S1SvImJ_G0039494.1 mouse_genomes_project 9 12295847 12295970 + Gm25500 snoRNA snoRNA MGP_129S1SvImJ_T0091336.1 MGP_129S1SvImJ_G0034420.1 mouse_genomes_project 9 17635437 17662516 - MGP_129S1SvImJ_P0091336 Zfp266 protein_coding protein_coding MGP_129S1SvImJ_T0091337.1 MGP_129S1SvImJ_G0034420.1 mouse_genomes_project 9 17639425 17662507 - MGP_129S1SvImJ_P0091337 Zfp266 protein_coding protein_coding MGP_129S1SvImJ_T0005554.1 MGP_129S1SvImJ_G0004688.1 mouse_genomes_project 9 109434223 109443830 - Gm9917 antisense antisense MGP_129S1SvImJ_T0005555.1 MGP_129S1SvImJ_G0004688.1 mouse_genomes_project 9 109438251 109443833 - Gm9917 antisense antisense MGP_129S1SvImJ_T0005556.1 MGP_129S1SvImJ_G0004688.1 mouse_genomes_project 9 109439157 109442342 - Gm9917 antisense antisense MGP_129S1SvImJ_T0005557.1 MGP_129S1SvImJ_G0004688.1 mouse_genomes_project 9 109439761 109442198 - Gm9917 antisense antisense MGP_129S1SvImJ_T0091699.1 MGP_129S1SvImJ_G0034541.1 mouse_genomes_project 9 33458709 33461795 - MGP_129S1SvImJ_P0091699 Pate3 protein_coding protein_coding MGP_129S1SvImJ_T0016133.1 MGP_129S1SvImJ_G0014222.1 mouse_genomes_project 9 96750053 96750495 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095167.1 MGP_129S1SvImJ_G0035415.1 mouse_genomes_project 9 121987000 122090980 - MGP_129S1SvImJ_P0095167 Oxsr1 protein_coding protein_coding MGP_129S1SvImJ_T0095168.1 MGP_129S1SvImJ_G0035415.1 mouse_genomes_project 9 121989238 122090875 - MGP_129S1SvImJ_P0095168 Oxsr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095169.1 MGP_129S1SvImJ_G0035415.1 mouse_genomes_project 9 121989713 121991931 - Oxsr1 protein_coding retained_intron MGP_129S1SvImJ_T0095170.1 MGP_129S1SvImJ_G0035415.1 mouse_genomes_project 9 121991336 122013246 - MGP_129S1SvImJ_P0095170 Oxsr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092426.1 MGP_129S1SvImJ_G0034833.1 mouse_genomes_project 9 54019033 54019781 - MGP_129S1SvImJ_P0092426 AY074887 protein_coding protein_coding MGP_129S1SvImJ_T0016122.1 MGP_129S1SvImJ_G0014211.1 mouse_genomes_project 9 92231688 92232130 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011122.1 MGP_129S1SvImJ_G0009238.1 mouse_genomes_project 9 110835465 110835551 + Gm23156 miRNA miRNA MGP_129S1SvImJ_T0002473.1 MGP_129S1SvImJ_G0002382.1 mouse_genomes_project 9 106885354 106886763 + TEC TEC MGP_129S1SvImJ_T0002410.1 MGP_129S1SvImJ_G0002320.1 mouse_genomes_project 9 75999347 76000035 + TEC TEC MGP_129S1SvImJ_T0091831.1 MGP_129S1SvImJ_G0034604.1 mouse_genomes_project 9 36603920 36606617 + MGP_129S1SvImJ_P0091831 Olfr910 protein_coding protein_coding MGP_129S1SvImJ_T0092596.1 MGP_129S1SvImJ_G0034885.1 mouse_genomes_project 9 57426021 57428978 - MGP_129S1SvImJ_P0092596 Islr protein_coding protein_coding MGP_129S1SvImJ_T0092597.1 MGP_129S1SvImJ_G0034885.1 mouse_genomes_project 9 57426021 57428311 - MGP_129S1SvImJ_P0092597 Islr protein_coding protein_coding MGP_129S1SvImJ_T0092853.1 MGP_129S1SvImJ_G0034954.1 mouse_genomes_project 9 65073124 65087310 + MGP_129S1SvImJ_P0092853 Pdcd7 protein_coding protein_coding MGP_129S1SvImJ_T0093773.1 MGP_129S1SvImJ_G0035157.1 mouse_genomes_project 9 99895321 99909553 - MGP_129S1SvImJ_P0093773 Mrps22 protein_coding protein_coding MGP_129S1SvImJ_T0093774.1 MGP_129S1SvImJ_G0035157.1 mouse_genomes_project 9 99901823 99909538 - Mrps22 protein_coding retained_intron MGP_129S1SvImJ_T0092773.1 MGP_129S1SvImJ_G0034931.1 mouse_genomes_project 9 63214289 63253183 + MGP_129S1SvImJ_P0092773 Aagab protein_coding protein_coding MGP_129S1SvImJ_T0092025.1 MGP_129S1SvImJ_G0034699.1 mouse_genomes_project 9 42772092 42784031 - MGP_129S1SvImJ_P0092025 Hinfp protein_coding protein_coding MGP_129S1SvImJ_T0016124.1 MGP_129S1SvImJ_G0014213.1 mouse_genomes_project 9 93598276 93598424 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091460.1 MGP_129S1SvImJ_G0034462.1 mouse_genomes_project 9 19021461 19060878 - MGP_129S1SvImJ_P0091460 Kank2 protein_coding protein_coding MGP_129S1SvImJ_T0016164.1 MGP_129S1SvImJ_G0014253.1 mouse_genomes_project 9 110279794 110280158 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0094400.1 MGP_129S1SvImJ_G0035274.1 mouse_genomes_project 9 109850593 109864632 + MGP_129S1SvImJ_P0094400 Camkv protein_coding protein_coding MGP_129S1SvImJ_T0094401.1 MGP_129S1SvImJ_G0035274.1 mouse_genomes_project 9 109850817 109864618 + Camkv protein_coding retained_intron MGP_129S1SvImJ_T0094402.1 MGP_129S1SvImJ_G0035274.1 mouse_genomes_project 9 109850827 109861129 + MGP_129S1SvImJ_P0094402 Camkv protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094403.1 MGP_129S1SvImJ_G0035274.1 mouse_genomes_project 9 109852219 109860478 + MGP_129S1SvImJ_P0094403 Camkv protein_coding protein_coding MGP_129S1SvImJ_T0094404.1 MGP_129S1SvImJ_G0035274.1 mouse_genomes_project 9 109860199 109864624 + MGP_129S1SvImJ_P0094404 Camkv protein_coding protein_coding MGP_129S1SvImJ_T0092541.1 MGP_129S1SvImJ_G0034868.1 mouse_genomes_project 9 56751292 56754491 + MGP_129S1SvImJ_P0092541 Fam219b protein_coding protein_coding MGP_129S1SvImJ_T0016068.1 MGP_129S1SvImJ_G0014157.1 mouse_genomes_project 9 72049928 72050637 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0092951.1 MGP_129S1SvImJ_G0034981.1 mouse_genomes_project 9 66683513 66714356 - MGP_129S1SvImJ_P0092951 Aph1c protein_coding protein_coding MGP_129S1SvImJ_T0093618.1 MGP_129S1SvImJ_G0035125.1 mouse_genomes_project 9 93241291 93259982 + MGP_129S1SvImJ_P0093618 Plscr5 protein_coding protein_coding MGP_129S1SvImJ_T0091673.1 MGP_129S1SvImJ_G0034533.1 mouse_genomes_project 9 33021501 33075867 - MGP_129S1SvImJ_P0091673 Fam118b protein_coding protein_coding MGP_129S1SvImJ_T0091674.1 MGP_129S1SvImJ_G0034533.1 mouse_genomes_project 9 33021567 33075892 - MGP_129S1SvImJ_P0091674 Fam118b protein_coding protein_coding MGP_129S1SvImJ_T0091675.1 MGP_129S1SvImJ_G0034533.1 mouse_genomes_project 9 33021567 33075864 - MGP_129S1SvImJ_P0091675 Fam118b protein_coding protein_coding MGP_129S1SvImJ_T0091676.1 MGP_129S1SvImJ_G0034533.1 mouse_genomes_project 9 33021782 33041747 - MGP_129S1SvImJ_P0091676 Fam118b protein_coding protein_coding MGP_129S1SvImJ_T0091677.1 MGP_129S1SvImJ_G0034533.1 mouse_genomes_project 9 33027850 33075854 - MGP_129S1SvImJ_P0091677 Fam118b protein_coding protein_coding MGP_129S1SvImJ_T0091678.1 MGP_129S1SvImJ_G0034533.1 mouse_genomes_project 9 33038361 33075867 - Fam118b protein_coding retained_intron MGP_129S1SvImJ_T0091679.1 MGP_129S1SvImJ_G0034533.1 mouse_genomes_project 9 33074402 33075867 - Fam118b protein_coding retained_intron MGP_129S1SvImJ_T0100191.1 MGP_129S1SvImJ_G0038258.1 mouse_genomes_project 9 72263209 72263308 - Gm25045 snRNA snRNA MGP_129S1SvImJ_T0009230.1 MGP_129S1SvImJ_G0007419.1 mouse_genomes_project 9 32389872 32390651 - Gm26662 lincRNA lincRNA MGP_129S1SvImJ_T0092537.1 MGP_129S1SvImJ_G0034864.1 mouse_genomes_project 9 56618941 56643819 - MGP_129S1SvImJ_P0092537 Ppcdc protein_coding unknown_likely_coding MGP_129S1SvImJ_T0095322.1 MGP_129S1SvImJ_G0035463.1 mouse_genomes_project 9 125838324 125845974 - MGP_129S1SvImJ_P0095322 Gm35549 protein_coding protein_coding MGP_129S1SvImJ_T0095323.1 MGP_129S1SvImJ_G0035463.1 mouse_genomes_project 9 125838324 125845974 - MGP_129S1SvImJ_P0095323 Gm35549 protein_coding protein_coding MGP_129S1SvImJ_T0095324.1 MGP_129S1SvImJ_G0035463.1 mouse_genomes_project 9 125838324 125845974 - MGP_129S1SvImJ_P0095324 Gm35549 protein_coding protein_coding MGP_129S1SvImJ_T0016034.1 MGP_129S1SvImJ_G0014123.1 mouse_genomes_project 9 22218818 22219812 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002441.1 MGP_129S1SvImJ_G0002350.1 mouse_genomes_project 9 97390564 97393562 + TEC TEC MGP_129S1SvImJ_T0091835.1 MGP_129S1SvImJ_G0034608.1 mouse_genomes_project 9 36717432 36718365 - MGP_129S1SvImJ_P0091835 Olfr916 protein_coding protein_coding MGP_129S1SvImJ_T0091318.1 MGP_129S1SvImJ_G0034417.1 mouse_genomes_project 9 17460426 17513216 - MGP_129S1SvImJ_P0091318 Zfp560 protein_coding protein_coding MGP_129S1SvImJ_T0091319.1 MGP_129S1SvImJ_G0034417.1 mouse_genomes_project 9 17467821 17513216 - Zfp560 protein_coding retained_intron MGP_129S1SvImJ_T0005528.1 MGP_129S1SvImJ_G0004667.1 mouse_genomes_project 9 98334438 98337646 + Gm16185 antisense antisense MGP_129S1SvImJ_T0016096.1 MGP_129S1SvImJ_G0014185.1 mouse_genomes_project 9 81522578 81525442 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098658.1 MGP_129S1SvImJ_G0036743.1 mouse_genomes_project 9 9749048 9749169 + Gm25365 rRNA rRNA MGP_129S1SvImJ_T0095210.1 MGP_129S1SvImJ_G0035431.1 mouse_genomes_project 9 122929697 122947050 + MGP_129S1SvImJ_P0095210 Slc25a38 protein_coding protein_coding MGP_129S1SvImJ_T0095211.1 MGP_129S1SvImJ_G0035431.1 mouse_genomes_project 9 122929728 122941498 + MGP_129S1SvImJ_P0095211 Slc25a38 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095212.1 MGP_129S1SvImJ_G0035431.1 mouse_genomes_project 9 122929731 122941127 + Slc25a38 protein_coding processed_transcript MGP_129S1SvImJ_T0095213.1 MGP_129S1SvImJ_G0035431.1 mouse_genomes_project 9 122929731 122930921 + Slc25a38 protein_coding processed_transcript MGP_129S1SvImJ_T0095214.1 MGP_129S1SvImJ_G0035431.1 mouse_genomes_project 9 122929747 122946197 + MGP_129S1SvImJ_P0095214 Slc25a38 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095215.1 MGP_129S1SvImJ_G0035431.1 mouse_genomes_project 9 122935671 122943017 + MGP_129S1SvImJ_P0095215 Slc25a38 protein_coding protein_coding MGP_129S1SvImJ_T0095216.1 MGP_129S1SvImJ_G0035431.1 mouse_genomes_project 9 122935810 122941102 + Slc25a38 protein_coding processed_transcript MGP_129S1SvImJ_T0016069.1 MGP_129S1SvImJ_G0014158.1 mouse_genomes_project 9 72090634 72090733 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095206.1 MGP_129S1SvImJ_G0035428.1 mouse_genomes_project 9 122782145 122795705 - MGP_129S1SvImJ_P0095206 Csrnp1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0095289.1 MGP_129S1SvImJ_G0035450.1 mouse_genomes_project 9 124744394 124752919 - MGP_129S1SvImJ_P0095289 Hhatl protein_coding protein_coding MGP_129S1SvImJ_T0095290.1 MGP_129S1SvImJ_G0035450.1 mouse_genomes_project 9 124744400 124751445 - MGP_129S1SvImJ_P0095290 Hhatl protein_coding protein_coding MGP_129S1SvImJ_T0091929.1 MGP_129S1SvImJ_G0034670.1 mouse_genomes_project 9 39039891 39040733 + protein_coding retained_intron MGP_129S1SvImJ_T0094231.1 MGP_129S1SvImJ_G0035252.1 mouse_genomes_project 9 109263390 109401314 + MGP_129S1SvImJ_P0094231 Cacna2d2 protein_coding protein_coding MGP_129S1SvImJ_T0094232.1 MGP_129S1SvImJ_G0035252.1 mouse_genomes_project 9 109263390 109401314 + MGP_129S1SvImJ_P0094232 Cacna2d2 protein_coding protein_coding MGP_129S1SvImJ_T0094233.1 MGP_129S1SvImJ_G0035252.1 mouse_genomes_project 9 109263631 109400962 + MGP_129S1SvImJ_P0094233 Cacna2d2 protein_coding protein_coding MGP_129S1SvImJ_T0094234.1 MGP_129S1SvImJ_G0035252.1 mouse_genomes_project 9 109263631 109401314 + MGP_129S1SvImJ_P0094234 Cacna2d2 protein_coding protein_coding MGP_129S1SvImJ_T0094235.1 MGP_129S1SvImJ_G0035252.1 mouse_genomes_project 9 109263788 109401314 + MGP_129S1SvImJ_P0094235 Cacna2d2 protein_coding protein_coding MGP_129S1SvImJ_T0094236.1 MGP_129S1SvImJ_G0035252.1 mouse_genomes_project 9 109263833 109399462 + MGP_129S1SvImJ_P0094236 Cacna2d2 protein_coding protein_coding MGP_129S1SvImJ_T0094237.1 MGP_129S1SvImJ_G0035252.1 mouse_genomes_project 9 109375686 109383596 + Cacna2d2 protein_coding processed_transcript MGP_129S1SvImJ_T0094238.1 MGP_129S1SvImJ_G0035252.1 mouse_genomes_project 9 109379345 109383958 + Cacna2d2 protein_coding processed_transcript MGP_129S1SvImJ_T0094239.1 MGP_129S1SvImJ_G0035252.1 mouse_genomes_project 9 109393508 109395482 + Cacna2d2 protein_coding retained_intron MGP_129S1SvImJ_T0094240.1 MGP_129S1SvImJ_G0035252.1 mouse_genomes_project 9 109398654 109399565 + Cacna2d2 protein_coding retained_intron MGP_129S1SvImJ_T0092365.1 MGP_129S1SvImJ_G0034811.1 mouse_genomes_project 9 52459773 52561164 - MGP_129S1SvImJ_P0092365 Atm protein_coding protein_coding MGP_129S1SvImJ_T0092366.1 MGP_129S1SvImJ_G0034811.1 mouse_genomes_project 9 52460385 52561136 - MGP_129S1SvImJ_P0092366 Atm protein_coding unknown_likely_coding MGP_129S1SvImJ_T0092367.1 MGP_129S1SvImJ_G0034811.1 mouse_genomes_project 9 52460744 52463196 - Atm protein_coding retained_intron MGP_129S1SvImJ_T0092368.1 MGP_129S1SvImJ_G0034811.1 mouse_genomes_project 9 52466013 52474751 - MGP_129S1SvImJ_P0092368 Atm protein_coding protein_coding MGP_129S1SvImJ_T0092369.1 MGP_129S1SvImJ_G0034811.1 mouse_genomes_project 9 52546275 52561097 - Atm protein_coding retained_intron MGP_129S1SvImJ_T0092370.1 MGP_129S1SvImJ_G0034811.1 mouse_genomes_project 9 52551623 52561032 - MGP_129S1SvImJ_P0092370 Atm protein_coding protein_coding MGP_129S1SvImJ_T0016107.1 MGP_129S1SvImJ_G0014196.1 mouse_genomes_project 9 87139164 87139708 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0093558.1 MGP_129S1SvImJ_G0035111.1 mouse_genomes_project 9 89465695 89473222 + MGP_129S1SvImJ_P0093558 protein_coding protein_coding MGP_129S1SvImJ_T0093338.1 MGP_129S1SvImJ_G0035067.1 mouse_genomes_project 9 78878742 78881329 - MGP_129S1SvImJ_P0093338 Ooep protein_coding protein_coding MGP_129S1SvImJ_T0002382.1 MGP_129S1SvImJ_G0002292.1 mouse_genomes_project 9 55406239 55407808 + TEC TEC MGP_129S1SvImJ_T0094160.1 MGP_129S1SvImJ_G0035237.1 mouse_genomes_project 9 108317398 108361151 - Iqcf3 protein_coding processed_transcript MGP_129S1SvImJ_T0094162.1 MGP_129S1SvImJ_G0035237.1 mouse_genomes_project 9 108359847 108379488 - MGP_129S1SvImJ_P0094162 Iqcf3 protein_coding protein_coding MGP_129S1SvImJ_T0094163.1 MGP_129S1SvImJ_G0035237.1 mouse_genomes_project 9 108360256 108379486 - MGP_129S1SvImJ_P0094163 Iqcf3 protein_coding protein_coding MGP_129S1SvImJ_T0094164.1 MGP_129S1SvImJ_G0035237.1 mouse_genomes_project 9 108369590 108379456 - MGP_129S1SvImJ_P0094164 Iqcf3 protein_coding protein_coding MGP_129S1SvImJ_T0094165.1 MGP_129S1SvImJ_G0035237.1 mouse_genomes_project 9 108370137 108379456 - MGP_129S1SvImJ_P0094165 Iqcf3 protein_coding protein_coding MGP_129S1SvImJ_T0091472.1 MGP_129S1SvImJ_G0034467.1 mouse_genomes_project 9 19200509 19208736 + MGP_129S1SvImJ_P0091472 Ccdc159 protein_coding protein_coding MGP_129S1SvImJ_T0091473.1 MGP_129S1SvImJ_G0034467.1 mouse_genomes_project 9 19200509 19208736 + MGP_129S1SvImJ_P0091473 Ccdc159 protein_coding protein_coding MGP_129S1SvImJ_T0093564.1 MGP_129S1SvImJ_G0035116.1 mouse_genomes_project 9 90628857 90634718 - MGP_129S1SvImJ_P0093564 Tmed3 protein_coding protein_coding MGP_129S1SvImJ_T0093565.1 MGP_129S1SvImJ_G0035116.1 mouse_genomes_project 9 90632895 90634473 - Tmed3 protein_coding retained_intron MGP_129S1SvImJ_T0091619.1 MGP_129S1SvImJ_G0034521.1 mouse_genomes_project 9 29548595 29624871 - MGP_129S1SvImJ_P0091619 Barx2 protein_coding protein_coding MGP_129S1SvImJ_T0011758.1 MGP_129S1SvImJ_G0009874.1 mouse_genomes_project 9 61530475 61530568 + Gm23221 misc_RNA misc_RNA MGP_129S1SvImJ_T0092875.1 MGP_129S1SvImJ_G0034964.1 mouse_genomes_project 9 65394347 65434316 + MGP_129S1SvImJ_P0092875 Rbpms2 protein_coding protein_coding MGP_129S1SvImJ_T0092876.1 MGP_129S1SvImJ_G0034964.1 mouse_genomes_project 9 65395305 65434293 + MGP_129S1SvImJ_P0092876 Rbpms2 protein_coding protein_coding MGP_129S1SvImJ_T0092877.1 MGP_129S1SvImJ_G0034964.1 mouse_genomes_project 9 65395551 65434323 + MGP_129S1SvImJ_P0092877 Rbpms2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0005438.1 MGP_129S1SvImJ_G0004608.1 mouse_genomes_project 9 18274227 18312006 + 1700084C06Rik antisense antisense MGP_129S1SvImJ_T0094185.1 MGP_129S1SvImJ_G0035244.1 mouse_genomes_project 9 108663579 108730277 + MGP_129S1SvImJ_P0094185 Vprbp protein_coding protein_coding MGP_129S1SvImJ_T0094186.1 MGP_129S1SvImJ_G0035244.1 mouse_genomes_project 9 108673325 108731219 + MGP_129S1SvImJ_P0094186 Vprbp protein_coding protein_coding MGP_129S1SvImJ_T0094188.1 MGP_129S1SvImJ_G0035244.1 mouse_genomes_project 9 108701019 108703218 + Vprbp protein_coding retained_intron MGP_129S1SvImJ_T0094190.1 MGP_129S1SvImJ_G0035244.1 mouse_genomes_project 9 108724556 108730443 + MGP_129S1SvImJ_P0094190 Vprbp protein_coding protein_coding MGP_129S1SvImJ_T0005585.1 MGP_129S1SvImJ_G0004712.1 mouse_genomes_project 9 126989059 126990074 + Gm15247 antisense antisense MGP_129S1SvImJ_T0094959.1 MGP_129S1SvImJ_G0035364.1 mouse_genomes_project 9 113106589 113109335 - MGP_129S1SvImJ_P0094959 Gm590 protein_coding protein_coding MGP_129S1SvImJ_T0094486.1 MGP_129S1SvImJ_G0035286.1 mouse_genomes_project 9 110014468 110023603 - MGP_129S1SvImJ_P0094486 Apeh protein_coding protein_coding MGP_129S1SvImJ_T0094487.1 MGP_129S1SvImJ_G0035286.1 mouse_genomes_project 9 110014478 110015093 - Apeh protein_coding retained_intron MGP_129S1SvImJ_T0094488.1 MGP_129S1SvImJ_G0035286.1 mouse_genomes_project 9 110014478 110023536 - Apeh protein_coding retained_intron MGP_129S1SvImJ_T0094489.1 MGP_129S1SvImJ_G0035286.1 mouse_genomes_project 9 110014978 110015533 - Apeh protein_coding retained_intron MGP_129S1SvImJ_T0094490.1 MGP_129S1SvImJ_G0035286.1 mouse_genomes_project 9 110015212 110017585 - Apeh protein_coding retained_intron MGP_129S1SvImJ_T0094491.1 MGP_129S1SvImJ_G0035286.1 mouse_genomes_project 9 110015840 110023546 - Apeh protein_coding retained_intron MGP_129S1SvImJ_T0094492.1 MGP_129S1SvImJ_G0035286.1 mouse_genomes_project 9 110021413 110023090 - Apeh protein_coding retained_intron MGP_129S1SvImJ_T0094493.1 MGP_129S1SvImJ_G0035286.1 mouse_genomes_project 9 110021692 110023549 - MGP_129S1SvImJ_P0094493 Apeh protein_coding protein_coding MGP_129S1SvImJ_T0094109.1 MGP_129S1SvImJ_G0035228.1 mouse_genomes_project 9 108238394 108240182 + MGP_129S1SvImJ_P0094109 protein_coding protein_coding MGP_129S1SvImJ_T0016171.1 MGP_129S1SvImJ_G0014260.1 mouse_genomes_project 9 119680570 119680932 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002413.1 MGP_129S1SvImJ_G0002323.1 mouse_genomes_project 9 77730257 77731267 - TEC TEC MGP_129S1SvImJ_T0091868.1 MGP_129S1SvImJ_G0034635.1 mouse_genomes_project 9 37682004 37682946 - MGP_129S1SvImJ_P0091868 Olfr958 protein_coding protein_coding MGP_129S1SvImJ_T0011107.1 MGP_129S1SvImJ_G0009223.1 mouse_genomes_project 9 78018096 78018170 + Gm25250 miRNA miRNA MGP_129S1SvImJ_T0011077.1 MGP_129S1SvImJ_G0009193.1 mouse_genomes_project 9 39828091 39828171 + Mir100 miRNA miRNA MGP_129S1SvImJ_T0094658.1 MGP_129S1SvImJ_G0035312.1 mouse_genomes_project 9 110774763 110797326 + MGP_129S1SvImJ_P0094658 Ip6k2 protein_coding protein_coding MGP_129S1SvImJ_T0094659.1 MGP_129S1SvImJ_G0035312.1 mouse_genomes_project 9 110774763 110788959 + MGP_129S1SvImJ_P0094659 Ip6k2 protein_coding protein_coding MGP_129S1SvImJ_T0094660.1 MGP_129S1SvImJ_G0035312.1 mouse_genomes_project 9 110774789 110789804 + Ip6k2 protein_coding retained_intron MGP_129S1SvImJ_T0094661.1 MGP_129S1SvImJ_G0035312.1 mouse_genomes_project 9 110774830 110788662 + MGP_129S1SvImJ_P0094661 Ip6k2 protein_coding protein_coding MGP_129S1SvImJ_T0094662.1 MGP_129S1SvImJ_G0035312.1 mouse_genomes_project 9 110774832 110787947 + Ip6k2 protein_coding retained_intron MGP_129S1SvImJ_T0094663.1 MGP_129S1SvImJ_G0035312.1 mouse_genomes_project 9 110774832 110788315 + MGP_129S1SvImJ_P0094663 Ip6k2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094664.1 MGP_129S1SvImJ_G0035312.1 mouse_genomes_project 9 110786963 110797331 + MGP_129S1SvImJ_P0094664 Ip6k2 protein_coding protein_coding MGP_129S1SvImJ_T0094665.1 MGP_129S1SvImJ_G0035312.1 mouse_genomes_project 9 110786963 110790239 + MGP_129S1SvImJ_P0094665 Ip6k2 protein_coding protein_coding MGP_129S1SvImJ_T0094666.1 MGP_129S1SvImJ_G0035312.1 mouse_genomes_project 9 110787033 110788412 + MGP_129S1SvImJ_P0094666 Ip6k2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094667.1 MGP_129S1SvImJ_G0035312.1 mouse_genomes_project 9 110787100 110788964 + MGP_129S1SvImJ_P0094667 Ip6k2 protein_coding protein_coding MGP_129S1SvImJ_T0094668.1 MGP_129S1SvImJ_G0035312.1 mouse_genomes_project 9 110787321 110788663 + MGP_129S1SvImJ_P0094668 Ip6k2 protein_coding protein_coding MGP_129S1SvImJ_T0094669.1 MGP_129S1SvImJ_G0035312.1 mouse_genomes_project 9 110789156 110790342 + Ip6k2 protein_coding retained_intron MGP_129S1SvImJ_T0091788.1 MGP_129S1SvImJ_G0034567.1 mouse_genomes_project 9 35538090 35543023 + MGP_129S1SvImJ_P0091788 Vsig2 protein_coding protein_coding MGP_129S1SvImJ_T0009321.1 MGP_129S1SvImJ_G0007489.1 mouse_genomes_project 9 99480446 99481073 - 2610303G11Rik lincRNA lincRNA MGP_129S1SvImJ_T0092222.1 MGP_129S1SvImJ_G0034761.1 mouse_genomes_project 9 47265077 47271696 - MGP_129S1SvImJ_P0092222 Rbm7 protein_coding protein_coding MGP_129S1SvImJ_T0016029.1 MGP_129S1SvImJ_G0014118.1 mouse_genomes_project 9 19799937 19800450 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005532.1 MGP_129S1SvImJ_G0004670.1 mouse_genomes_project 9 99897142 99898398 + Gm37637 antisense antisense MGP_129S1SvImJ_T0093962.1 MGP_129S1SvImJ_G0035202.1 mouse_genomes_project 9 105646058 105686296 + Nphp3 protein_coding retained_intron MGP_129S1SvImJ_T0093963.1 MGP_129S1SvImJ_G0035202.1 mouse_genomes_project 9 105646060 105692223 + MGP_129S1SvImJ_P0093963 Nphp3 protein_coding protein_coding MGP_129S1SvImJ_T0093964.1 MGP_129S1SvImJ_G0035202.1 mouse_genomes_project 9 105646168 105691514 + MGP_129S1SvImJ_P0093964 Nphp3 protein_coding protein_coding MGP_129S1SvImJ_T0093965.1 MGP_129S1SvImJ_G0035202.1 mouse_genomes_project 9 105646168 105809445 + MGP_129S1SvImJ_P0093965 Nphp3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093966.1 MGP_129S1SvImJ_G0035202.1 mouse_genomes_project 9 105646272 105662326 + Nphp3 protein_coding retained_intron MGP_129S1SvImJ_T0093967.1 MGP_129S1SvImJ_G0035202.1 mouse_genomes_project 9 105646281 105690730 + MGP_129S1SvImJ_P0093967 Nphp3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093968.1 MGP_129S1SvImJ_G0035202.1 mouse_genomes_project 9 105678427 105680982 + Nphp3 protein_coding retained_intron MGP_129S1SvImJ_T0093969.1 MGP_129S1SvImJ_G0035202.1 mouse_genomes_project 9 105682407 105685101 + MGP_129S1SvImJ_P0093969 Nphp3 protein_coding protein_coding MGP_129S1SvImJ_T0095297.1 MGP_129S1SvImJ_G0035452.1 mouse_genomes_project 9 124813642 124823087 - MGP_129S1SvImJ_P0095297 Higd1a protein_coding protein_coding MGP_129S1SvImJ_T0016177.1 MGP_129S1SvImJ_G0014266.1 mouse_genomes_project 9 126814099 126814374 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101492.1 MGP_129S1SvImJ_G0039559.1 mouse_genomes_project 9 109004491 109004621 + Gm23595 snoRNA snoRNA MGP_129S1SvImJ_T0101498.1 MGP_129S1SvImJ_G0039565.1 mouse_genomes_project 9 114814297 114814430 + Gm24957 snoRNA snoRNA MGP_129S1SvImJ_T0093703.1 MGP_129S1SvImJ_G0035143.1 mouse_genomes_project 9 97517693 97552290 - MGP_129S1SvImJ_P0093703 Atp1b3 protein_coding protein_coding MGP_129S1SvImJ_T0093704.1 MGP_129S1SvImJ_G0035143.1 mouse_genomes_project 9 97523706 97528606 - Atp1b3 protein_coding retained_intron MGP_129S1SvImJ_T0093705.1 MGP_129S1SvImJ_G0035143.1 mouse_genomes_project 9 97530829 97536043 - Atp1b3 protein_coding processed_transcript MGP_129S1SvImJ_T0091947.1 MGP_129S1SvImJ_G0034676.1 mouse_genomes_project 9 40593837 40605413 - MGP_129S1SvImJ_P0091947 Sc5d protein_coding protein_coding MGP_129S1SvImJ_T0091948.1 MGP_129S1SvImJ_G0034676.1 mouse_genomes_project 9 40595794 40605313 - MGP_129S1SvImJ_P0091948 Sc5d protein_coding protein_coding MGP_129S1SvImJ_T0018599.1 MGP_129S1SvImJ_G0015754.1 mouse_genomes_project 9 97982834 97991744 + C430002N11Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018600.1 MGP_129S1SvImJ_G0015754.1 mouse_genomes_project 9 97982847 97992539 + C430002N11Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018601.1 MGP_129S1SvImJ_G0015754.1 mouse_genomes_project 9 97982847 98005067 + C430002N11Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018602.1 MGP_129S1SvImJ_G0015754.1 mouse_genomes_project 9 97982857 97991756 + C430002N11Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018603.1 MGP_129S1SvImJ_G0015754.1 mouse_genomes_project 9 97982873 97991435 + C430002N11Rik processed_transcript lincRNA MGP_129S1SvImJ_T0002486.1 MGP_129S1SvImJ_G0002395.1 mouse_genomes_project 9 112127359 112128299 + TEC TEC MGP_129S1SvImJ_T0092637.1 MGP_129S1SvImJ_G0034896.1 mouse_genomes_project 9 58181094 58341695 - MGP_129S1SvImJ_P0092637 Neo1 protein_coding protein_coding MGP_129S1SvImJ_T0092638.1 MGP_129S1SvImJ_G0034896.1 mouse_genomes_project 9 58183689 58342094 - MGP_129S1SvImJ_P0092638 Neo1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0093606.1 MGP_129S1SvImJ_G0035124.1 mouse_genomes_project 9 92377683 92393635 + MGP_129S1SvImJ_P0093606 Zic4 protein_coding protein_coding MGP_129S1SvImJ_T0093607.1 MGP_129S1SvImJ_G0035124.1 mouse_genomes_project 9 92383186 92383953 + Zic4 protein_coding processed_transcript MGP_129S1SvImJ_T0093608.1 MGP_129S1SvImJ_G0035124.1 mouse_genomes_project 9 92383631 92393977 + MGP_129S1SvImJ_P0093608 Zic4 protein_coding protein_coding MGP_129S1SvImJ_T0093609.1 MGP_129S1SvImJ_G0035124.1 mouse_genomes_project 9 92383713 92395703 + Zic4 protein_coding retained_intron MGP_129S1SvImJ_T0093610.1 MGP_129S1SvImJ_G0035124.1 mouse_genomes_project 9 92383789 92403589 + MGP_129S1SvImJ_P0093610 Zic4 protein_coding protein_coding MGP_129S1SvImJ_T0093611.1 MGP_129S1SvImJ_G0035124.1 mouse_genomes_project 9 92384309 92394260 + Zic4 protein_coding retained_intron MGP_129S1SvImJ_T0093612.1 MGP_129S1SvImJ_G0035124.1 mouse_genomes_project 9 92385815 92393909 + MGP_129S1SvImJ_P0093612 Zic4 protein_coding protein_coding MGP_129S1SvImJ_T0093613.1 MGP_129S1SvImJ_G0035124.1 mouse_genomes_project 9 92386024 92402754 + MGP_129S1SvImJ_P0093613 Zic4 protein_coding protein_coding MGP_129S1SvImJ_T0093614.1 MGP_129S1SvImJ_G0035124.1 mouse_genomes_project 9 92386161 92388729 + Zic4 protein_coding retained_intron MGP_129S1SvImJ_T0093615.1 MGP_129S1SvImJ_G0035124.1 mouse_genomes_project 9 92392916 92399151 + Zic4 protein_coding retained_intron MGP_129S1SvImJ_T0093616.1 MGP_129S1SvImJ_G0035124.1 mouse_genomes_project 9 92393361 92405178 + MGP_129S1SvImJ_P0093616 Zic4 protein_coding protein_coding MGP_129S1SvImJ_T0093617.1 MGP_129S1SvImJ_G0035124.1 mouse_genomes_project 9 92397162 92403840 + Zic4 protein_coding processed_transcript MGP_129S1SvImJ_T0101465.1 MGP_129S1SvImJ_G0039532.1 mouse_genomes_project 9 65751169 65751301 - Gm22657 snoRNA snoRNA MGP_129S1SvImJ_T0009297.1 MGP_129S1SvImJ_G0007472.1 mouse_genomes_project 9 89133396 89136538 + Gm28231 lincRNA lincRNA MGP_129S1SvImJ_T0101428.1 MGP_129S1SvImJ_G0039495.1 mouse_genomes_project 9 12297097 12297228 + Gm24455 snoRNA snoRNA MGP_129S1SvImJ_T0093444.1 MGP_129S1SvImJ_G0035088.1 mouse_genomes_project 9 84464122 84498227 - MGP_129S1SvImJ_P0093444 Elovl4 protein_coding protein_coding MGP_129S1SvImJ_T0093445.1 MGP_129S1SvImJ_G0035088.1 mouse_genomes_project 9 84466137 84498252 - MGP_129S1SvImJ_P0093445 Elovl4 protein_coding protein_coding MGP_129S1SvImJ_T0098407.1 MGP_129S1SvImJ_G0036492.1 mouse_genomes_project 9 37826806 37827709 - pseudogene pseudogene MGP_129S1SvImJ_T0091572.1 MGP_129S1SvImJ_G0034509.1 mouse_genomes_project 9 24883594 24888480 + MGP_129S1SvImJ_P0091572 Spata19 protein_coding protein_coding MGP_129S1SvImJ_T0092261.1 MGP_129S1SvImJ_G0034782.1 mouse_genomes_project 9 49503196 49504616 + MGP_129S1SvImJ_P0092261 Timm8b protein_coding protein_coding MGP_129S1SvImJ_T0091388.1 MGP_129S1SvImJ_G0034439.1 mouse_genomes_project 9 18249820 18255813 - MGP_129S1SvImJ_P0091388 Fdx1l protein_coding protein_coding MGP_129S1SvImJ_T0092950.1 MGP_129S1SvImJ_G0034980.1 mouse_genomes_project 9 66663627 66665660 + MGP_129S1SvImJ_P0092950 Gm10647 protein_coding protein_coding MGP_129S1SvImJ_T0101484.1 MGP_129S1SvImJ_G0039551.1 mouse_genomes_project 9 96752239 96752349 + Gm25582 snoRNA snoRNA MGP_129S1SvImJ_T0101786.1 MGP_129S1SvImJ_G0039759.1 mouse_genomes_project 9 111921034 111927711 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101787.1 MGP_129S1SvImJ_G0039759.1 mouse_genomes_project 9 111923296 111927715 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101788.1 MGP_129S1SvImJ_G0039759.1 mouse_genomes_project 9 111923494 111926391 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0092924.1 MGP_129S1SvImJ_G0034975.1 mouse_genomes_project 9 66183623 66211334 + Herc1 protein_coding retained_intron MGP_129S1SvImJ_T0092925.1 MGP_129S1SvImJ_G0034975.1 mouse_genomes_project 9 66183699 66354337 + MGP_129S1SvImJ_P0092925 Herc1 protein_coding protein_coding MGP_129S1SvImJ_T0092926.1 MGP_129S1SvImJ_G0034975.1 mouse_genomes_project 9 66282299 66294459 + Herc1 protein_coding retained_intron MGP_129S1SvImJ_T0092927.1 MGP_129S1SvImJ_G0034975.1 mouse_genomes_project 9 66293285 66306070 + MGP_129S1SvImJ_P0092927 Herc1 protein_coding protein_coding MGP_129S1SvImJ_T0092928.1 MGP_129S1SvImJ_G0034975.1 mouse_genomes_project 9 66309930 66319248 + Herc1 protein_coding retained_intron MGP_129S1SvImJ_T0092929.1 MGP_129S1SvImJ_G0034975.1 mouse_genomes_project 9 66341455 66345421 + Herc1 protein_coding retained_intron MGP_129S1SvImJ_T0092930.1 MGP_129S1SvImJ_G0034975.1 mouse_genomes_project 9 66345154 66353155 + Herc1 protein_coding retained_intron MGP_129S1SvImJ_T0016169.1 MGP_129S1SvImJ_G0014258.1 mouse_genomes_project 9 113275266 113275622 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011103.1 MGP_129S1SvImJ_G0009219.1 mouse_genomes_project 9 70914522 70914604 - Gm25149 miRNA miRNA MGP_129S1SvImJ_T0095300.1 MGP_129S1SvImJ_G0035455.1 mouse_genomes_project 9 124904336 124913220 + MGP_129S1SvImJ_P0095300 1700048O20Rik protein_coding protein_coding MGP_129S1SvImJ_T0009344.1 MGP_129S1SvImJ_G0007509.1 mouse_genomes_project 9 111850530 111857752 - lincRNA lincRNA MGP_129S1SvImJ_T0009345.1 MGP_129S1SvImJ_G0007509.1 mouse_genomes_project 9 111850536 111858387 - lincRNA lincRNA MGP_129S1SvImJ_T0009346.1 MGP_129S1SvImJ_G0007509.1 mouse_genomes_project 9 111850536 111858329 - lincRNA lincRNA MGP_129S1SvImJ_T0101488.1 MGP_129S1SvImJ_G0039555.1 mouse_genomes_project 9 102710785 102710912 + Gm24338 snoRNA snoRNA MGP_129S1SvImJ_T0091824.1 MGP_129S1SvImJ_G0034597.1 mouse_genomes_project 9 36484548 36485484 + MGP_129S1SvImJ_P0091824 Olfr901 protein_coding protein_coding MGP_129S1SvImJ_T0092219.1 MGP_129S1SvImJ_G0034758.1 mouse_genomes_project 9 47147795 47173916 + MGP_129S1SvImJ_P0092219 Nxpe4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091959.1 MGP_129S1SvImJ_G0034679.1 mouse_genomes_project 9 40865620 41315486 - MGP_129S1SvImJ_P0091959 Grik4 protein_coding protein_coding MGP_129S1SvImJ_T0091960.1 MGP_129S1SvImJ_G0034679.1 mouse_genomes_project 9 40868641 41177230 - MGP_129S1SvImJ_P0091960 Grik4 protein_coding protein_coding MGP_129S1SvImJ_T0095006.1 MGP_129S1SvImJ_G0035372.1 mouse_genomes_project 9 113504681 113511837 + MGP_129S1SvImJ_P0095006 Epm2aip1 protein_coding protein_coding MGP_129S1SvImJ_T0095007.1 MGP_129S1SvImJ_G0035372.1 mouse_genomes_project 9 113504697 113511841 + MGP_129S1SvImJ_P0095007 Epm2aip1 protein_coding protein_coding MGP_129S1SvImJ_T0095008.1 MGP_129S1SvImJ_G0035372.1 mouse_genomes_project 9 113506854 113510281 + Epm2aip1 protein_coding processed_transcript MGP_129S1SvImJ_T0093777.1 MGP_129S1SvImJ_G0035160.1 mouse_genomes_project 9 100185083 100186900 + MGP_129S1SvImJ_P0093777 Prr23a3 protein_coding protein_coding MGP_129S1SvImJ_T0093828.1 MGP_129S1SvImJ_G0035174.1 mouse_genomes_project 9 101072310 101096596 - MGP_129S1SvImJ_P0093828 Cldn18 protein_coding protein_coding MGP_129S1SvImJ_T0093829.1 MGP_129S1SvImJ_G0035174.1 mouse_genomes_project 9 101076317 101103795 - MGP_129S1SvImJ_P0093829 Cldn18 protein_coding protein_coding MGP_129S1SvImJ_T0093830.1 MGP_129S1SvImJ_G0035174.1 mouse_genomes_project 9 101076679 101096542 - MGP_129S1SvImJ_P0093830 Cldn18 protein_coding protein_coding MGP_129S1SvImJ_T0093831.1 MGP_129S1SvImJ_G0035174.1 mouse_genomes_project 9 101077219 101103795 - MGP_129S1SvImJ_P0093831 Cldn18 protein_coding protein_coding MGP_129S1SvImJ_T0092097.1 MGP_129S1SvImJ_G0034722.1 mouse_genomes_project 9 43443710 43451726 - MGP_129S1SvImJ_P0092097 Atp5l protein_coding protein_coding MGP_129S1SvImJ_T0094167.1 MGP_129S1SvImJ_G0035240.1 mouse_genomes_project 9 108441529 108442623 + MGP_129S1SvImJ_P0094167 Iqcf6 protein_coding protein_coding MGP_129S1SvImJ_T0002403.1 MGP_129S1SvImJ_G0002313.1 mouse_genomes_project 9 73068123 73070033 + TEC TEC MGP_129S1SvImJ_T0101500.1 MGP_129S1SvImJ_G0039567.1 mouse_genomes_project 9 122061764 122061893 - Gm22729 snoRNA snoRNA MGP_129S1SvImJ_T0091117.1 MGP_129S1SvImJ_G0034327.1 mouse_genomes_project 9 4552331 4559835 + MGP_129S1SvImJ_P0091117 Mmp7 protein_coding protein_coding MGP_129S1SvImJ_T0091422.1 MGP_129S1SvImJ_G0034452.1 mouse_genomes_project 9 18625028 18635909 + MGP_129S1SvImJ_P0091422 Qtrt1 protein_coding protein_coding MGP_129S1SvImJ_T0016075.1 MGP_129S1SvImJ_G0014164.1 mouse_genomes_project 9 72776856 72777671 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011061.1 MGP_129S1SvImJ_G0009177.1 mouse_genomes_project 9 10543145 10543246 + Gm22643 miRNA miRNA MGP_129S1SvImJ_T0091192.1 MGP_129S1SvImJ_G0034347.1 mouse_genomes_project 9 11213009 11262794 + MGP_129S1SvImJ_P0091192 Sesn3 protein_coding protein_coding MGP_129S1SvImJ_T0093355.1 MGP_129S1SvImJ_G0035074.1 mouse_genomes_project 9 80125053 80250682 - MGP_129S1SvImJ_P0093355 Col12a1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0093356.1 MGP_129S1SvImJ_G0035074.1 mouse_genomes_project 9 80125059 80139111 - MGP_129S1SvImJ_P0093356 Col12a1 protein_coding protein_coding MGP_129S1SvImJ_T0093357.1 MGP_129S1SvImJ_G0035074.1 mouse_genomes_project 9 80125059 80250711 - MGP_129S1SvImJ_P0093357 Col12a1 protein_coding protein_coding MGP_129S1SvImJ_T0093358.1 MGP_129S1SvImJ_G0035074.1 mouse_genomes_project 9 80127820 80250913 - MGP_129S1SvImJ_P0093358 Col12a1 protein_coding protein_coding MGP_129S1SvImJ_T0093359.1 MGP_129S1SvImJ_G0035074.1 mouse_genomes_project 9 80221497 80250913 - Col12a1 protein_coding retained_intron MGP_129S1SvImJ_T0093360.1 MGP_129S1SvImJ_G0035074.1 mouse_genomes_project 9 80244734 80251024 - Col12a1 protein_coding retained_intron MGP_129S1SvImJ_T0093361.1 MGP_129S1SvImJ_G0035074.1 mouse_genomes_project 9 80247105 80250687 - Col12a1 protein_coding retained_intron MGP_129S1SvImJ_T0016078.1 MGP_129S1SvImJ_G0014167.1 mouse_genomes_project 9 73907374 73907534 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091886.1 MGP_129S1SvImJ_G0034647.1 mouse_genomes_project 9 37960338 37961111 + MGP_129S1SvImJ_P0091886 Olfr969 protein_coding protein_coding MGP_129S1SvImJ_T0091818.1 MGP_129S1SvImJ_G0034591.1 mouse_genomes_project 9 36318030 36318981 + MGP_129S1SvImJ_P0091818 Olfr895 protein_coding protein_coding MGP_129S1SvImJ_T0095200.1 MGP_129S1SvImJ_G0035425.1 mouse_genomes_project 9 122709291 122887632 - MGP_129S1SvImJ_P0095200 Cx3cr1 protein_coding protein_coding MGP_129S1SvImJ_T0095208.1 MGP_129S1SvImJ_G0035425.1 mouse_genomes_project 9 122865132 122887631 - MGP_129S1SvImJ_P0095208 Cx3cr1 protein_coding protein_coding MGP_129S1SvImJ_T0092120.1 MGP_129S1SvImJ_G0034732.1 mouse_genomes_project 9 43684497 43700245 + MGP_129S1SvImJ_P0092120 Scn4b protein_coding protein_coding MGP_129S1SvImJ_T0094782.1 MGP_129S1SvImJ_G0035337.1 mouse_genomes_project 9 111927757 111937146 + MGP_129S1SvImJ_P0094782 Nme6 protein_coding protein_coding MGP_129S1SvImJ_T0094783.1 MGP_129S1SvImJ_G0035337.1 mouse_genomes_project 9 111927766 111937591 + MGP_129S1SvImJ_P0094783 Nme6 protein_coding protein_coding MGP_129S1SvImJ_T0094784.1 MGP_129S1SvImJ_G0035337.1 mouse_genomes_project 9 111927779 111928598 + Nme6 protein_coding retained_intron MGP_129S1SvImJ_T0094785.1 MGP_129S1SvImJ_G0035337.1 mouse_genomes_project 9 111927779 111937492 + Nme6 protein_coding processed_transcript MGP_129S1SvImJ_T0094786.1 MGP_129S1SvImJ_G0035337.1 mouse_genomes_project 9 111927789 111936656 + MGP_129S1SvImJ_P0094786 Nme6 protein_coding protein_coding MGP_129S1SvImJ_T0094787.1 MGP_129S1SvImJ_G0035337.1 mouse_genomes_project 9 111927794 111937276 + Nme6 protein_coding processed_transcript MGP_129S1SvImJ_T0094788.1 MGP_129S1SvImJ_G0035337.1 mouse_genomes_project 9 111927795 111937573 + Nme6 protein_coding processed_transcript MGP_129S1SvImJ_T0094789.1 MGP_129S1SvImJ_G0035337.1 mouse_genomes_project 9 111927815 111930634 + Nme6 protein_coding retained_intron MGP_129S1SvImJ_T0094790.1 MGP_129S1SvImJ_G0035337.1 mouse_genomes_project 9 111927894 111937203 + MGP_129S1SvImJ_P0094790 Nme6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094791.1 MGP_129S1SvImJ_G0035337.1 mouse_genomes_project 9 111928038 111937341 + MGP_129S1SvImJ_P0094791 Nme6 protein_coding protein_coding MGP_129S1SvImJ_T0094792.1 MGP_129S1SvImJ_G0035337.1 mouse_genomes_project 9 111928050 111937278 + MGP_129S1SvImJ_P0094792 Nme6 protein_coding protein_coding MGP_129S1SvImJ_T0094793.1 MGP_129S1SvImJ_G0035337.1 mouse_genomes_project 9 111928055 111937197 + Nme6 protein_coding processed_transcript MGP_129S1SvImJ_T0094794.1 MGP_129S1SvImJ_G0035337.1 mouse_genomes_project 9 111928199 111936243 + Nme6 protein_coding retained_intron MGP_129S1SvImJ_T0094795.1 MGP_129S1SvImJ_G0035337.1 mouse_genomes_project 9 111928201 111937164 + Nme6 protein_coding processed_transcript MGP_129S1SvImJ_T0094796.1 MGP_129S1SvImJ_G0035337.1 mouse_genomes_project 9 111928299 111937733 + Nme6 protein_coding processed_transcript MGP_129S1SvImJ_T0011102.1 MGP_129S1SvImJ_G0009218.1 mouse_genomes_project 9 70477467 70477527 - Mir5626 miRNA miRNA MGP_129S1SvImJ_T0091423.1 MGP_129S1SvImJ_G0034453.1 mouse_genomes_project 9 18640539 18726933 + MGP_129S1SvImJ_P0091423 Dnm2 protein_coding protein_coding MGP_129S1SvImJ_T0091424.1 MGP_129S1SvImJ_G0034453.1 mouse_genomes_project 9 18640563 18726317 + MGP_129S1SvImJ_P0091424 Dnm2 protein_coding protein_coding MGP_129S1SvImJ_T0091425.1 MGP_129S1SvImJ_G0034453.1 mouse_genomes_project 9 18640576 18726319 + MGP_129S1SvImJ_P0091425 Dnm2 protein_coding protein_coding MGP_129S1SvImJ_T0091426.1 MGP_129S1SvImJ_G0034453.1 mouse_genomes_project 9 18640599 18688411 + MGP_129S1SvImJ_P0091426 Dnm2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091427.1 MGP_129S1SvImJ_G0034453.1 mouse_genomes_project 9 18640602 18726305 + MGP_129S1SvImJ_P0091427 Dnm2 protein_coding protein_coding MGP_129S1SvImJ_T0091428.1 MGP_129S1SvImJ_G0034453.1 mouse_genomes_project 9 18640607 18726303 + MGP_129S1SvImJ_P0091428 Dnm2 protein_coding protein_coding MGP_129S1SvImJ_T0091429.1 MGP_129S1SvImJ_G0034453.1 mouse_genomes_project 9 18640727 18710334 + MGP_129S1SvImJ_P0091429 Dnm2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091430.1 MGP_129S1SvImJ_G0034453.1 mouse_genomes_project 9 18640727 18725581 + MGP_129S1SvImJ_P0091430 Dnm2 protein_coding protein_coding MGP_129S1SvImJ_T0091431.1 MGP_129S1SvImJ_G0034453.1 mouse_genomes_project 9 18640874 18711853 + Dnm2 protein_coding processed_transcript MGP_129S1SvImJ_T0091432.1 MGP_129S1SvImJ_G0034453.1 mouse_genomes_project 9 18640875 18726933 + MGP_129S1SvImJ_P0091432 Dnm2 protein_coding protein_coding MGP_129S1SvImJ_T0091433.1 MGP_129S1SvImJ_G0034453.1 mouse_genomes_project 9 18677200 18677664 + Dnm2 protein_coding processed_transcript MGP_129S1SvImJ_T0091434.1 MGP_129S1SvImJ_G0034453.1 mouse_genomes_project 9 18697177 18719738 + MGP_129S1SvImJ_P0091434 Dnm2 protein_coding protein_coding MGP_129S1SvImJ_T0091435.1 MGP_129S1SvImJ_G0034453.1 mouse_genomes_project 9 18701001 18726938 + Dnm2 protein_coding retained_intron MGP_129S1SvImJ_T0091436.1 MGP_129S1SvImJ_G0034453.1 mouse_genomes_project 9 18714369 18723801 + Dnm2 protein_coding retained_intron MGP_129S1SvImJ_T0091437.1 MGP_129S1SvImJ_G0034453.1 mouse_genomes_project 9 18724285 18725578 + Dnm2 protein_coding processed_transcript MGP_129S1SvImJ_T0092752.1 MGP_129S1SvImJ_G0034924.1 mouse_genomes_project 9 62404845 62424107 + MGP_129S1SvImJ_P0092752 Cln6 protein_coding protein_coding MGP_129S1SvImJ_T0092753.1 MGP_129S1SvImJ_G0034924.1 mouse_genomes_project 9 62404852 62418119 + MGP_129S1SvImJ_P0092753 Cln6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092754.1 MGP_129S1SvImJ_G0034924.1 mouse_genomes_project 9 62418115 62422812 + MGP_129S1SvImJ_P0092754 Cln6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092755.1 MGP_129S1SvImJ_G0034924.1 mouse_genomes_project 9 62419133 62423263 + MGP_129S1SvImJ_P0092755 Cln6 protein_coding protein_coding MGP_129S1SvImJ_T0092458.1 MGP_129S1SvImJ_G0034841.1 mouse_genomes_project 9 54420205 54537623 + MGP_129S1SvImJ_P0092458 Tmem266 protein_coding protein_coding MGP_129S1SvImJ_T0092459.1 MGP_129S1SvImJ_G0034841.1 mouse_genomes_project 9 54420241 54537623 + MGP_129S1SvImJ_P0092459 Tmem266 protein_coding protein_coding MGP_129S1SvImJ_T0092460.1 MGP_129S1SvImJ_G0034841.1 mouse_genomes_project 9 54426492 54536636 + Tmem266 protein_coding processed_transcript MGP_129S1SvImJ_T0011131.1 MGP_129S1SvImJ_G0009247.1 mouse_genomes_project 9 120662933 120663020 + Gm22008 miRNA miRNA MGP_129S1SvImJ_T0009277.1 MGP_129S1SvImJ_G0007455.1 mouse_genomes_project 9 72957904 72960104 - Gm27204 lincRNA lincRNA MGP_129S1SvImJ_T0009221.1 MGP_129S1SvImJ_G0007410.1 mouse_genomes_project 9 22566415 22586542 + Gm29642 lincRNA lincRNA MGP_129S1SvImJ_T0094105.1 MGP_129S1SvImJ_G0035227.1 mouse_genomes_project 9 108167482 108175973 + MGP_129S1SvImJ_P0094105 Dusp7 protein_coding protein_coding MGP_129S1SvImJ_T0094106.1 MGP_129S1SvImJ_G0035227.1 mouse_genomes_project 9 108168459 108169716 + Dusp7 protein_coding processed_transcript MGP_129S1SvImJ_T0094107.1 MGP_129S1SvImJ_G0035227.1 mouse_genomes_project 9 108169584 108172705 + MGP_129S1SvImJ_P0094107 Dusp7 protein_coding protein_coding MGP_129S1SvImJ_T0094108.1 MGP_129S1SvImJ_G0035227.1 mouse_genomes_project 9 108173479 108175970 + Dusp7 protein_coding processed_transcript MGP_129S1SvImJ_T0093666.1 MGP_129S1SvImJ_G0035139.1 mouse_genomes_project 9 97005021 97016882 + Atr protein_coding retained_intron MGP_129S1SvImJ_T0093667.1 MGP_129S1SvImJ_G0035139.1 mouse_genomes_project 9 97005021 97109605 + MGP_129S1SvImJ_P0093667 Atr protein_coding protein_coding MGP_129S1SvImJ_T0093668.1 MGP_129S1SvImJ_G0035139.1 mouse_genomes_project 9 97005063 97060057 + Atr protein_coding retained_intron MGP_129S1SvImJ_T0093669.1 MGP_129S1SvImJ_G0035139.1 mouse_genomes_project 9 97005074 97012106 + Atr protein_coding retained_intron MGP_129S1SvImJ_T0093670.1 MGP_129S1SvImJ_G0035139.1 mouse_genomes_project 9 97005079 97009180 + Atr protein_coding retained_intron MGP_129S1SvImJ_T0093671.1 MGP_129S1SvImJ_G0035139.1 mouse_genomes_project 9 97005093 97018474 + Atr protein_coding retained_intron MGP_129S1SvImJ_T0093672.1 MGP_129S1SvImJ_G0035139.1 mouse_genomes_project 9 97005149 97109585 + MGP_129S1SvImJ_P0093672 Atr protein_coding unknown_likely_coding MGP_129S1SvImJ_T0093673.1 MGP_129S1SvImJ_G0035139.1 mouse_genomes_project 9 97038076 97041973 + Atr protein_coding retained_intron MGP_129S1SvImJ_T0093674.1 MGP_129S1SvImJ_G0035139.1 mouse_genomes_project 9 97060539 97062040 + Atr protein_coding retained_intron MGP_129S1SvImJ_T0093675.1 MGP_129S1SvImJ_G0035139.1 mouse_genomes_project 9 97070461 97074619 + Atr protein_coding retained_intron MGP_129S1SvImJ_T0093676.1 MGP_129S1SvImJ_G0035139.1 mouse_genomes_project 9 97090778 97092549 + Atr protein_coding retained_intron MGP_129S1SvImJ_T0094556.1 MGP_129S1SvImJ_G0035300.1 mouse_genomes_project 9 110439580 110440226 + MGP_129S1SvImJ_P0094556 Lamb2 protein_coding protein_coding MGP_129S1SvImJ_T0094557.1 MGP_129S1SvImJ_G0035300.1 mouse_genomes_project 9 110439701 110450340 + MGP_129S1SvImJ_P0094557 Lamb2 protein_coding protein_coding MGP_129S1SvImJ_T0094558.1 MGP_129S1SvImJ_G0035300.1 mouse_genomes_project 9 110439716 110440498 + MGP_129S1SvImJ_P0094558 Lamb2 protein_coding protein_coding MGP_129S1SvImJ_T0094559.1 MGP_129S1SvImJ_G0035300.1 mouse_genomes_project 9 110439722 110440431 + MGP_129S1SvImJ_P0094559 Lamb2 protein_coding protein_coding MGP_129S1SvImJ_T0094560.1 MGP_129S1SvImJ_G0035300.1 mouse_genomes_project 9 110439725 110440029 + Lamb2 protein_coding retained_intron MGP_129S1SvImJ_T0094561.1 MGP_129S1SvImJ_G0035300.1 mouse_genomes_project 9 110447627 110448481 + Lamb2 protein_coding retained_intron MGP_129S1SvImJ_T0094562.1 MGP_129S1SvImJ_G0035300.1 mouse_genomes_project 9 110448686 110449342 + Lamb2 protein_coding retained_intron MGP_129S1SvImJ_T0102837.1 MGP_129S1SvImJ_G0040669.1 mouse_genomes_project 9 17034428 17034801 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0092470.1 MGP_129S1SvImJ_G0034844.1 mouse_genomes_project 9 54668015 55038281 - MGP_129S1SvImJ_P0092470 Scaper protein_coding protein_coding MGP_129S1SvImJ_T0092471.1 MGP_129S1SvImJ_G0034844.1 mouse_genomes_project 9 54868972 55056473 - MGP_129S1SvImJ_P0092471 Scaper protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091300.1 MGP_129S1SvImJ_G0034399.1 mouse_genomes_project 9 16695567 16719541 + MGP_129S1SvImJ_P0091300 Zfp317 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0011765.1 MGP_129S1SvImJ_G0009881.1 mouse_genomes_project 9 108452645 108452905 + Gm26185 misc_RNA misc_RNA MGP_129S1SvImJ_T0091901.1 MGP_129S1SvImJ_G0034662.1 mouse_genomes_project 9 38321766 38322882 - MGP_129S1SvImJ_P0091901 Olfr985 protein_coding protein_coding MGP_129S1SvImJ_T0005475.1 MGP_129S1SvImJ_G0004633.1 mouse_genomes_project 9 57014787 57072258 + antisense antisense MGP_129S1SvImJ_T0005476.1 MGP_129S1SvImJ_G0004633.1 mouse_genomes_project 9 57064133 57072592 + antisense antisense MGP_129S1SvImJ_T0005477.1 MGP_129S1SvImJ_G0004633.1 mouse_genomes_project 9 57065642 57072497 + antisense antisense MGP_129S1SvImJ_T0091711.1 MGP_129S1SvImJ_G0034549.1 mouse_genomes_project 9 34389244 34390819 + MGP_129S1SvImJ_P0091711 Gm9513 protein_coding protein_coding MGP_129S1SvImJ_T0002420.1 MGP_129S1SvImJ_G0002330.1 mouse_genomes_project 9 87376469 87376583 - TEC TEC MGP_129S1SvImJ_T0002421.1 MGP_129S1SvImJ_G0002330.1 mouse_genomes_project 9 87376469 87376941 - TEC TEC MGP_129S1SvImJ_T0005488.1 MGP_129S1SvImJ_G0004641.1 mouse_genomes_project 9 69340000 69355345 - Gm15511 antisense antisense MGP_129S1SvImJ_T0009290.1 MGP_129S1SvImJ_G0007467.1 mouse_genomes_project 9 82056954 82062524 + Gm27226 lincRNA lincRNA MGP_129S1SvImJ_T0091895.1 MGP_129S1SvImJ_G0034656.1 mouse_genomes_project 9 38167962 38169007 - MGP_129S1SvImJ_P0091895 Olfr979 protein_coding protein_coding MGP_129S1SvImJ_T0092651.1 MGP_129S1SvImJ_G0034902.1 mouse_genomes_project 9 58931895 58962105 + MGP_129S1SvImJ_P0092651 Celf6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092652.1 MGP_129S1SvImJ_G0034902.1 mouse_genomes_project 9 58932170 58962105 + MGP_129S1SvImJ_P0092652 Celf6 protein_coding protein_coding MGP_129S1SvImJ_T0092653.1 MGP_129S1SvImJ_G0034902.1 mouse_genomes_project 9 58932170 58962105 + MGP_129S1SvImJ_P0092653 Celf6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092654.1 MGP_129S1SvImJ_G0034902.1 mouse_genomes_project 9 58932356 58963982 + MGP_129S1SvImJ_P0092654 Celf6 protein_coding protein_coding MGP_129S1SvImJ_T0092655.1 MGP_129S1SvImJ_G0034902.1 mouse_genomes_project 9 58957496 58958250 + Celf6 protein_coding retained_intron MGP_129S1SvImJ_T0092656.1 MGP_129S1SvImJ_G0034902.1 mouse_genomes_project 9 58958871 58960940 + Celf6 protein_coding retained_intron MGP_129S1SvImJ_T0092838.1 MGP_129S1SvImJ_G0034947.1 mouse_genomes_project 9 64683362 64718939 - MGP_129S1SvImJ_P0092838 Hacd3 protein_coding protein_coding MGP_129S1SvImJ_T0093162.1 MGP_129S1SvImJ_G0035022.1 mouse_genomes_project 9 73181144 73189013 - MGP_129S1SvImJ_P0093162 Ccpg1os protein_coding protein_coding MGP_129S1SvImJ_T0093163.1 MGP_129S1SvImJ_G0035022.1 mouse_genomes_project 9 73186133 73189019 - Ccpg1os protein_coding retained_intron MGP_129S1SvImJ_T0092984.1 MGP_129S1SvImJ_G0034987.1 mouse_genomes_project 9 67672204 67673698 + MGP_129S1SvImJ_P0092984 C2cd4b protein_coding protein_coding MGP_129S1SvImJ_T0094432.1 MGP_129S1SvImJ_G0035279.1 mouse_genomes_project 9 109908784 109915972 + MGP_129S1SvImJ_P0094432 Cdhr4 protein_coding protein_coding MGP_129S1SvImJ_T0094433.1 MGP_129S1SvImJ_G0035279.1 mouse_genomes_project 9 109911977 109914350 + MGP_129S1SvImJ_P0094433 Cdhr4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094434.1 MGP_129S1SvImJ_G0035279.1 mouse_genomes_project 9 109912013 109912862 + Cdhr4 protein_coding retained_intron MGP_129S1SvImJ_T0094435.1 MGP_129S1SvImJ_G0035279.1 mouse_genomes_project 9 109912019 109915960 + Cdhr4 protein_coding retained_intron MGP_129S1SvImJ_T0094436.1 MGP_129S1SvImJ_G0035279.1 mouse_genomes_project 9 109912043 109912646 + Cdhr4 protein_coding retained_intron MGP_129S1SvImJ_T0094437.1 MGP_129S1SvImJ_G0035279.1 mouse_genomes_project 9 109912050 109915963 + Cdhr4 protein_coding retained_intron MGP_129S1SvImJ_T0094438.1 MGP_129S1SvImJ_G0035279.1 mouse_genomes_project 9 109912070 109913218 + Cdhr4 protein_coding retained_intron MGP_129S1SvImJ_T0094439.1 MGP_129S1SvImJ_G0035279.1 mouse_genomes_project 9 109912193 109913950 + Cdhr4 protein_coding processed_transcript MGP_129S1SvImJ_T0094440.1 MGP_129S1SvImJ_G0035279.1 mouse_genomes_project 9 109912231 109915972 + MGP_129S1SvImJ_P0094440 Cdhr4 protein_coding protein_coding MGP_129S1SvImJ_T0094441.1 MGP_129S1SvImJ_G0035279.1 mouse_genomes_project 9 109912285 109913445 + Cdhr4 protein_coding retained_intron MGP_129S1SvImJ_T0094443.1 MGP_129S1SvImJ_G0035279.1 mouse_genomes_project 9 109912903 109915967 + MGP_129S1SvImJ_P0094443 Cdhr4 protein_coding protein_coding MGP_129S1SvImJ_T0094444.1 MGP_129S1SvImJ_G0035279.1 mouse_genomes_project 9 109913659 109915968 + MGP_129S1SvImJ_P0094444 Cdhr4 protein_coding protein_coding MGP_129S1SvImJ_T0094445.1 MGP_129S1SvImJ_G0035279.1 mouse_genomes_project 9 109913880 109915965 + MGP_129S1SvImJ_P0094445 Cdhr4 protein_coding protein_coding MGP_129S1SvImJ_T0094446.1 MGP_129S1SvImJ_G0035279.1 mouse_genomes_project 9 109913965 109915967 + MGP_129S1SvImJ_P0094446 Cdhr4 protein_coding protein_coding MGP_129S1SvImJ_T0094620.1 MGP_129S1SvImJ_G0035306.1 mouse_genomes_project 9 110537251 110540140 + MGP_129S1SvImJ_P0094620 Dalrd3 protein_coding protein_coding MGP_129S1SvImJ_T0094621.1 MGP_129S1SvImJ_G0035306.1 mouse_genomes_project 9 110537275 110538885 + MGP_129S1SvImJ_P0094621 Dalrd3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094622.1 MGP_129S1SvImJ_G0035306.1 mouse_genomes_project 9 110537279 110538052 + Dalrd3 protein_coding retained_intron MGP_129S1SvImJ_T0094623.1 MGP_129S1SvImJ_G0035306.1 mouse_genomes_project 9 110538061 110539347 + Dalrd3 protein_coding retained_intron MGP_129S1SvImJ_T0094624.1 MGP_129S1SvImJ_G0035306.1 mouse_genomes_project 9 110538372 110539206 + Dalrd3 protein_coding retained_intron MGP_129S1SvImJ_T0094625.1 MGP_129S1SvImJ_G0035306.1 mouse_genomes_project 9 110538602 110540139 + Dalrd3 protein_coding retained_intron MGP_129S1SvImJ_T0094626.1 MGP_129S1SvImJ_G0035306.1 mouse_genomes_project 9 110538883 110539897 + MGP_129S1SvImJ_P0094626 Dalrd3 protein_coding protein_coding MGP_129S1SvImJ_T0094627.1 MGP_129S1SvImJ_G0035306.1 mouse_genomes_project 9 110539632 110540137 + Dalrd3 protein_coding retained_intron MGP_129S1SvImJ_T0094629.1 MGP_129S1SvImJ_G0035306.1 mouse_genomes_project 9 110539757 110540021 + MGP_129S1SvImJ_P0094629 Dalrd3 protein_coding protein_coding MGP_129S1SvImJ_T0100192.1 MGP_129S1SvImJ_G0038259.1 mouse_genomes_project 9 72402944 72403048 - Gm25163 snRNA snRNA MGP_129S1SvImJ_T0011754.1 MGP_129S1SvImJ_G0009870.1 mouse_genomes_project 9 18917254 18917438 + Gm27373 misc_RNA misc_RNA MGP_129S1SvImJ_T0092498.1 MGP_129S1SvImJ_G0034857.1 mouse_genomes_project 9 56160190 56232008 + MGP_129S1SvImJ_P0092498 Ptpn9 protein_coding protein_coding MGP_129S1SvImJ_T0092598.1 MGP_129S1SvImJ_G0034886.1 mouse_genomes_project 9 57468382 57474370 - MGP_129S1SvImJ_P0092598 Islr2 protein_coding protein_coding MGP_129S1SvImJ_T0092599.1 MGP_129S1SvImJ_G0034886.1 mouse_genomes_project 9 57468382 57476404 - MGP_129S1SvImJ_P0092599 Islr2 protein_coding protein_coding MGP_129S1SvImJ_T0092600.1 MGP_129S1SvImJ_G0034886.1 mouse_genomes_project 9 57468382 57474619 - MGP_129S1SvImJ_P0092600 Islr2 protein_coding protein_coding MGP_129S1SvImJ_T0092601.1 MGP_129S1SvImJ_G0034886.1 mouse_genomes_project 9 57468382 57473884 - MGP_129S1SvImJ_P0092601 Islr2 protein_coding protein_coding MGP_129S1SvImJ_T0092602.1 MGP_129S1SvImJ_G0034886.1 mouse_genomes_project 9 57468382 57473800 - MGP_129S1SvImJ_P0092602 Islr2 protein_coding protein_coding MGP_129S1SvImJ_T0094744.1 MGP_129S1SvImJ_G0035323.1 mouse_genomes_project 9 111014748 111016550 - MGP_129S1SvImJ_P0094744 Trex1 protein_coding protein_coding MGP_129S1SvImJ_T0094746.1 MGP_129S1SvImJ_G0035323.1 mouse_genomes_project 9 111014753 111016067 - MGP_129S1SvImJ_P0094746 Trex1 protein_coding protein_coding MGP_129S1SvImJ_T0094535.1 MGP_129S1SvImJ_G0035296.1 mouse_genomes_project 9 110358583 110386190 - MGP_129S1SvImJ_P0094535 Ccdc36 protein_coding protein_coding MGP_129S1SvImJ_T0011120.1 MGP_129S1SvImJ_G0009236.1 mouse_genomes_project 9 110535684 110535758 + Mir191 miRNA miRNA MGP_129S1SvImJ_T0093126.1 MGP_129S1SvImJ_G0035015.1 mouse_genomes_project 9 72613137 72657392 - MGP_129S1SvImJ_P0093126 Tex9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093127.1 MGP_129S1SvImJ_G0035015.1 mouse_genomes_project 9 72623130 72637544 - Tex9 protein_coding retained_intron MGP_129S1SvImJ_T0093128.1 MGP_129S1SvImJ_G0035015.1 mouse_genomes_project 9 72623861 72657648 - MGP_129S1SvImJ_P0093128 Tex9 protein_coding protein_coding MGP_129S1SvImJ_T0093129.1 MGP_129S1SvImJ_G0035015.1 mouse_genomes_project 9 72623889 72657643 - MGP_129S1SvImJ_P0093129 Tex9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093130.1 MGP_129S1SvImJ_G0035015.1 mouse_genomes_project 9 72623965 72657537 - MGP_129S1SvImJ_P0093130 Tex9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093131.1 MGP_129S1SvImJ_G0035015.1 mouse_genomes_project 9 72623987 72657433 - MGP_129S1SvImJ_P0093131 Tex9 protein_coding protein_coding MGP_129S1SvImJ_T0093132.1 MGP_129S1SvImJ_G0035015.1 mouse_genomes_project 9 72624712 72657397 - Tex9 protein_coding retained_intron MGP_129S1SvImJ_T0093133.1 MGP_129S1SvImJ_G0035015.1 mouse_genomes_project 9 72624731 72642328 - Tex9 protein_coding processed_transcript MGP_129S1SvImJ_T0093134.1 MGP_129S1SvImJ_G0035015.1 mouse_genomes_project 9 72624761 72652651 - MGP_129S1SvImJ_P0093134 Tex9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093135.1 MGP_129S1SvImJ_G0035015.1 mouse_genomes_project 9 72639785 72640627 - Tex9 protein_coding retained_intron MGP_129S1SvImJ_T0093136.1 MGP_129S1SvImJ_G0035015.1 mouse_genomes_project 9 72639885 72649233 - MGP_129S1SvImJ_P0093136 Tex9 protein_coding protein_coding MGP_129S1SvImJ_T0093137.1 MGP_129S1SvImJ_G0035015.1 mouse_genomes_project 9 72639886 72657375 - MGP_129S1SvImJ_P0093137 Tex9 protein_coding protein_coding MGP_129S1SvImJ_T0093138.1 MGP_129S1SvImJ_G0035015.1 mouse_genomes_project 9 72642264 72657525 - Tex9 protein_coding retained_intron MGP_129S1SvImJ_T0093139.1 MGP_129S1SvImJ_G0035015.1 mouse_genomes_project 9 72642443 72657371 - Tex9 protein_coding retained_intron MGP_129S1SvImJ_T0016046.1 MGP_129S1SvImJ_G0014135.1 mouse_genomes_project 9 35693687 35694681 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0093778.1 MGP_129S1SvImJ_G0035161.1 mouse_genomes_project 9 100223804 100225308 + MGP_129S1SvImJ_P0093778 7420426K07Rik protein_coding protein_coding MGP_129S1SvImJ_T0098674.1 MGP_129S1SvImJ_G0036759.1 mouse_genomes_project 9 118154427 118154546 - n-R5s92 rRNA rRNA MGP_129S1SvImJ_T0016052.1 MGP_129S1SvImJ_G0014141.1 mouse_genomes_project 9 44426884 44429745 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005537.1 MGP_129S1SvImJ_G0004675.1 mouse_genomes_project 9 106935048 106938424 + Gm20643 antisense antisense MGP_129S1SvImJ_T0011100.1 MGP_129S1SvImJ_G0009216.1 mouse_genomes_project 9 67639762 67639841 - Mir7242 miRNA miRNA MGP_129S1SvImJ_T0101480.1 MGP_129S1SvImJ_G0039547.1 mouse_genomes_project 9 89482784 89482853 - Gm24463 snoRNA snoRNA MGP_129S1SvImJ_T0095198.1 MGP_129S1SvImJ_G0035423.1 mouse_genomes_project 9 122552019 122628895 - MGP_129S1SvImJ_P0095198 Scn11a protein_coding protein_coding MGP_129S1SvImJ_T0009213.1 MGP_129S1SvImJ_G0007402.1 mouse_genomes_project 9 10151312 10151715 - Gm29176 lincRNA lincRNA MGP_129S1SvImJ_T0016119.1 MGP_129S1SvImJ_G0014208.1 mouse_genomes_project 9 91723163 91723455 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0092700.1 MGP_129S1SvImJ_G0034912.1 mouse_genomes_project 9 60215112 60310928 + MGP_129S1SvImJ_P0092700 Uaca protein_coding protein_coding MGP_129S1SvImJ_T0091898.1 MGP_129S1SvImJ_G0034659.1 mouse_genomes_project 9 38258921 38259887 + MGP_129S1SvImJ_P0091898 Olfr982 protein_coding protein_coding MGP_129S1SvImJ_T0093520.1 MGP_129S1SvImJ_G0035103.1 mouse_genomes_project 9 88009482 88045958 + MGP_129S1SvImJ_P0093520 Mrap2 protein_coding protein_coding MGP_129S1SvImJ_T0093521.1 MGP_129S1SvImJ_G0035103.1 mouse_genomes_project 9 88009482 88045958 + MGP_129S1SvImJ_P0093521 Mrap2 protein_coding protein_coding MGP_129S1SvImJ_T0093522.1 MGP_129S1SvImJ_G0035103.1 mouse_genomes_project 9 88009519 88045958 + MGP_129S1SvImJ_P0093522 Mrap2 protein_coding protein_coding MGP_129S1SvImJ_T0092109.1 MGP_129S1SvImJ_G0034726.1 mouse_genomes_project 9 43535065 43546331 - MGP_129S1SvImJ_P0092109 Cd3e protein_coding protein_coding MGP_129S1SvImJ_T0095398.1 MGP_129S1SvImJ_G0035491.1 mouse_genomes_project 9 127135754 127146293 + MGP_129S1SvImJ_P0095398 Ccr3 protein_coding protein_coding MGP_129S1SvImJ_T0009247.1 MGP_129S1SvImJ_G0007432.1 mouse_genomes_project 9 44962980 44966038 - 4930448E22Rik lincRNA lincRNA MGP_129S1SvImJ_T0091064.1 MGP_129S1SvImJ_G0034305.1 mouse_genomes_project 9 21672 84599 + MGP_129S1SvImJ_P0091064 Alkbh8 protein_coding protein_coding MGP_129S1SvImJ_T0091065.1 MGP_129S1SvImJ_G0034305.1 mouse_genomes_project 9 21725 83148 + MGP_129S1SvImJ_P0091065 Alkbh8 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091066.1 MGP_129S1SvImJ_G0034305.1 mouse_genomes_project 9 24634 83391 + MGP_129S1SvImJ_P0091066 Alkbh8 protein_coding protein_coding MGP_129S1SvImJ_T0092910.1 MGP_129S1SvImJ_G0034970.1 mouse_genomes_project 9 65862549 65869461 + MGP_129S1SvImJ_P0092910 Ppib protein_coding protein_coding MGP_129S1SvImJ_T0016142.1 MGP_129S1SvImJ_G0014231.1 mouse_genomes_project 9 98493055 98493341 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100181.1 MGP_129S1SvImJ_G0038248.1 mouse_genomes_project 9 64905464 64905580 - Gm25313 snRNA snRNA MGP_129S1SvImJ_T0005458.1 MGP_129S1SvImJ_G0004624.1 mouse_genomes_project 9 44874002 44874899 - Gm10680 antisense antisense MGP_129S1SvImJ_T0091618.1 MGP_129S1SvImJ_G0034520.1 mouse_genomes_project 9 29116383 29153917 - MGP_129S1SvImJ_P0091618 Tmem45b protein_coding protein_coding MGP_129S1SvImJ_T0100194.1 MGP_129S1SvImJ_G0038261.1 mouse_genomes_project 9 73171789 73171896 + Gm23567 snRNA snRNA MGP_129S1SvImJ_T0002489.1 MGP_129S1SvImJ_G0002398.1 mouse_genomes_project 9 112516398 112519779 - TEC TEC MGP_129S1SvImJ_T0098659.1 MGP_129S1SvImJ_G0036744.1 mouse_genomes_project 9 32774039 32774169 + Gm23702 rRNA rRNA MGP_129S1SvImJ_T0011073.1 MGP_129S1SvImJ_G0009189.1 mouse_genomes_project 9 25809642 25809739 + Gm44316 miRNA miRNA MGP_129S1SvImJ_T0095257.1 MGP_129S1SvImJ_G0035443.1 mouse_genomes_project 9 124517676 124584435 - MGP_129S1SvImJ_P0095257 Lyzl4 protein_coding protein_coding MGP_129S1SvImJ_T0095258.1 MGP_129S1SvImJ_G0035443.1 mouse_genomes_project 9 124517682 124584965 - MGP_129S1SvImJ_P0095258 Lyzl4 protein_coding protein_coding MGP_129S1SvImJ_T0095259.1 MGP_129S1SvImJ_G0035443.1 mouse_genomes_project 9 124523920 124584395 - MGP_129S1SvImJ_P0095259 Lyzl4 protein_coding protein_coding MGP_129S1SvImJ_T0092548.1 MGP_129S1SvImJ_G0034871.1 mouse_genomes_project 9 56809442 56816215 + MGP_129S1SvImJ_P0092548 Ulk3 protein_coding protein_coding MGP_129S1SvImJ_T0094942.1 MGP_129S1SvImJ_G0035359.1 mouse_genomes_project 9 113020969 113027667 + MGP_129S1SvImJ_P0094942 Prss45 protein_coding protein_coding MGP_129S1SvImJ_T0094943.1 MGP_129S1SvImJ_G0035359.1 mouse_genomes_project 9 113020969 113027664 + MGP_129S1SvImJ_P0094943 Prss45 protein_coding protein_coding MGP_129S1SvImJ_T0091326.1 MGP_129S1SvImJ_G0034419.1 mouse_genomes_project 9 17608957 17618699 - MGP_129S1SvImJ_P0091326 Zfp426 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091327.1 MGP_129S1SvImJ_G0034419.1 mouse_genomes_project 9 17609116 17633139 - MGP_129S1SvImJ_P0091327 Zfp426 protein_coding protein_coding MGP_129S1SvImJ_T0091328.1 MGP_129S1SvImJ_G0034419.1 mouse_genomes_project 9 17610233 17633139 - MGP_129S1SvImJ_P0091328 Zfp426 protein_coding protein_coding MGP_129S1SvImJ_T0091329.1 MGP_129S1SvImJ_G0034419.1 mouse_genomes_project 9 17610402 17618586 - MGP_129S1SvImJ_P0091329 Zfp426 protein_coding protein_coding MGP_129S1SvImJ_T0091330.1 MGP_129S1SvImJ_G0034419.1 mouse_genomes_project 9 17611392 17613869 - Zfp426 protein_coding retained_intron MGP_129S1SvImJ_T0091331.1 MGP_129S1SvImJ_G0034419.1 mouse_genomes_project 9 17611538 17633128 - MGP_129S1SvImJ_P0091331 Zfp426 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091332.1 MGP_129S1SvImJ_G0034419.1 mouse_genomes_project 9 17611583 17631204 - MGP_129S1SvImJ_P0091332 Zfp426 protein_coding protein_coding MGP_129S1SvImJ_T0091333.1 MGP_129S1SvImJ_G0034419.1 mouse_genomes_project 9 17613511 17618683 - MGP_129S1SvImJ_P0091333 Zfp426 protein_coding protein_coding MGP_129S1SvImJ_T0091334.1 MGP_129S1SvImJ_G0034419.1 mouse_genomes_project 9 17615342 17633098 - MGP_129S1SvImJ_P0091334 Zfp426 protein_coding protein_coding MGP_129S1SvImJ_T0091335.1 MGP_129S1SvImJ_G0034419.1 mouse_genomes_project 9 17616850 17633108 - MGP_129S1SvImJ_P0091335 Zfp426 protein_coding protein_coding MGP_129S1SvImJ_T0092858.1 MGP_129S1SvImJ_G0034958.1 mouse_genomes_project 9 65142757 65154910 - MGP_129S1SvImJ_P0092858 Slc51b protein_coding protein_coding MGP_129S1SvImJ_T0098405.1 MGP_129S1SvImJ_G0036490.1 mouse_genomes_project 9 36238880 36239807 + pseudogene pseudogene MGP_129S1SvImJ_T0002417.1 MGP_129S1SvImJ_G0002327.1 mouse_genomes_project 9 84121198 84123819 + TEC TEC MGP_129S1SvImJ_T0095009.1 MGP_129S1SvImJ_G0035373.1 mouse_genomes_project 9 113546654 113632605 + MGP_129S1SvImJ_P0095009 Trank1 protein_coding protein_coding MGP_129S1SvImJ_T0095010.1 MGP_129S1SvImJ_G0035373.1 mouse_genomes_project 9 113546855 113594495 + Trank1 protein_coding processed_transcript MGP_129S1SvImJ_T0095011.1 MGP_129S1SvImJ_G0035373.1 mouse_genomes_project 9 113547011 113581725 + MGP_129S1SvImJ_P0095011 Trank1 protein_coding protein_coding MGP_129S1SvImJ_T0095012.1 MGP_129S1SvImJ_G0035373.1 mouse_genomes_project 9 113547144 113620977 + MGP_129S1SvImJ_P0095012 Trank1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0095013.1 MGP_129S1SvImJ_G0035373.1 mouse_genomes_project 9 113611802 113632605 + Trank1 protein_coding processed_transcript MGP_129S1SvImJ_T0095014.1 MGP_129S1SvImJ_G0035373.1 mouse_genomes_project 9 113611865 113626056 + Trank1 protein_coding processed_transcript MGP_129S1SvImJ_T0095015.1 MGP_129S1SvImJ_G0035373.1 mouse_genomes_project 9 113611870 113622166 + Trank1 protein_coding processed_transcript MGP_129S1SvImJ_T0095016.1 MGP_129S1SvImJ_G0035373.1 mouse_genomes_project 9 113621878 113632559 + MGP_129S1SvImJ_P0095016 Trank1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0095017.1 MGP_129S1SvImJ_G0035373.1 mouse_genomes_project 9 113623166 113626974 + Trank1 protein_coding retained_intron MGP_129S1SvImJ_T0094778.1 MGP_129S1SvImJ_G0035335.1 mouse_genomes_project 9 111701661 111764514 - MGP_129S1SvImJ_P0094778 Fbxw25 protein_coding protein_coding MGP_129S1SvImJ_T0016118.1 MGP_129S1SvImJ_G0014207.1 mouse_genomes_project 9 91720861 91721458 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101493.1 MGP_129S1SvImJ_G0039560.1 mouse_genomes_project 9 109902306 109902434 + Gm24944 snoRNA snoRNA MGP_129S1SvImJ_T0092250.1 MGP_129S1SvImJ_G0034775.1 mouse_genomes_project 9 48349028 48396704 + MGP_129S1SvImJ_P0092250 Gm11149 protein_coding protein_coding MGP_129S1SvImJ_T0092665.1 MGP_129S1SvImJ_G0034906.1 mouse_genomes_project 9 59103461 59123327 - MGP_129S1SvImJ_P0092665 Senp8 protein_coding protein_coding MGP_129S1SvImJ_T0092666.1 MGP_129S1SvImJ_G0034906.1 mouse_genomes_project 9 59103461 59123327 - MGP_129S1SvImJ_P0092666 Senp8 protein_coding protein_coding MGP_129S1SvImJ_T0098664.1 MGP_129S1SvImJ_G0036749.1 mouse_genomes_project 9 63675753 63675848 + Gm25606 rRNA rRNA MGP_129S1SvImJ_T0091521.1 MGP_129S1SvImJ_G0034490.1 mouse_genomes_project 9 20569448 20833381 + MGP_129S1SvImJ_P0091521 Bmper protein_coding protein_coding MGP_129S1SvImJ_T0092032.1 MGP_129S1SvImJ_G0034705.1 mouse_genomes_project 9 42863841 42876752 + MGP_129S1SvImJ_P0092032 Hyou1 protein_coding protein_coding MGP_129S1SvImJ_T0092033.1 MGP_129S1SvImJ_G0034705.1 mouse_genomes_project 9 42863897 42875915 + MGP_129S1SvImJ_P0092033 Hyou1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092034.1 MGP_129S1SvImJ_G0034705.1 mouse_genomes_project 9 42863908 42875128 + Hyou1 protein_coding retained_intron MGP_129S1SvImJ_T0092035.1 MGP_129S1SvImJ_G0034705.1 mouse_genomes_project 9 42863924 42876746 + MGP_129S1SvImJ_P0092035 Hyou1 protein_coding protein_coding MGP_129S1SvImJ_T0092036.1 MGP_129S1SvImJ_G0034705.1 mouse_genomes_project 9 42863935 42870442 + Hyou1 protein_coding retained_intron MGP_129S1SvImJ_T0092037.1 MGP_129S1SvImJ_G0034705.1 mouse_genomes_project 9 42863974 42875494 + MGP_129S1SvImJ_P0092037 Hyou1 protein_coding protein_coding MGP_129S1SvImJ_T0092038.1 MGP_129S1SvImJ_G0034705.1 mouse_genomes_project 9 42864880 42868519 + MGP_129S1SvImJ_P0092038 Hyou1 protein_coding protein_coding MGP_129S1SvImJ_T0092039.1 MGP_129S1SvImJ_G0034705.1 mouse_genomes_project 9 42875052 42875704 + Hyou1 protein_coding retained_intron MGP_129S1SvImJ_T0095084.1 MGP_129S1SvImJ_G0035393.1 mouse_genomes_project 9 117192571 117211131 + MGP_129S1SvImJ_P0095084 Cmtm6 protein_coding protein_coding MGP_129S1SvImJ_T0009252.1 MGP_129S1SvImJ_G0007435.1 mouse_genomes_project 9 52272311 52290563 + 4930510E17Rik lincRNA lincRNA MGP_129S1SvImJ_T0091288.1 MGP_129S1SvImJ_G0034387.1 mouse_genomes_project 9 16184778 16185733 + MGP_129S1SvImJ_P0091288 Olfr836 protein_coding protein_coding MGP_129S1SvImJ_T0093744.1 MGP_129S1SvImJ_G0035149.1 mouse_genomes_project 9 98322149 98362933 - MGP_129S1SvImJ_P0093744 Slc25a36 protein_coding protein_coding MGP_129S1SvImJ_T0093745.1 MGP_129S1SvImJ_G0035149.1 mouse_genomes_project 9 98322753 98333589 - MGP_129S1SvImJ_P0093745 Slc25a36 protein_coding protein_coding MGP_129S1SvImJ_T0093746.1 MGP_129S1SvImJ_G0035149.1 mouse_genomes_project 9 98328232 98362783 - MGP_129S1SvImJ_P0093746 Slc25a36 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093747.1 MGP_129S1SvImJ_G0035149.1 mouse_genomes_project 9 98328518 98334374 - Slc25a36 protein_coding retained_intron MGP_129S1SvImJ_T0093748.1 MGP_129S1SvImJ_G0035149.1 mouse_genomes_project 9 98329509 98339063 - Slc25a36 protein_coding processed_transcript MGP_129S1SvImJ_T0093749.1 MGP_129S1SvImJ_G0035149.1 mouse_genomes_project 9 98329675 98339180 - Slc25a36 protein_coding processed_transcript MGP_129S1SvImJ_T0093750.1 MGP_129S1SvImJ_G0035149.1 mouse_genomes_project 9 98338737 98349252 - MGP_129S1SvImJ_P0093750 Slc25a36 protein_coding protein_coding MGP_129S1SvImJ_T0093751.1 MGP_129S1SvImJ_G0035149.1 mouse_genomes_project 9 98341836 98362763 - Slc25a36 protein_coding retained_intron MGP_129S1SvImJ_T0093752.1 MGP_129S1SvImJ_G0035149.1 mouse_genomes_project 9 98348334 98362809 - Slc25a36 protein_coding retained_intron MGP_129S1SvImJ_T0094774.1 MGP_129S1SvImJ_G0035332.1 mouse_genomes_project 9 111482606 111484848 - Fbxw19 protein_coding retained_intron MGP_129S1SvImJ_T0094775.1 MGP_129S1SvImJ_G0035332.1 mouse_genomes_project 9 111484605 111571922 - MGP_129S1SvImJ_P0094775 Fbxw19 protein_coding protein_coding MGP_129S1SvImJ_T0094907.1 MGP_129S1SvImJ_G0035352.1 mouse_genomes_project 9 112790578 112819961 - MGP_129S1SvImJ_P0094907 Nbeal2 protein_coding protein_coding MGP_129S1SvImJ_T0094908.1 MGP_129S1SvImJ_G0035352.1 mouse_genomes_project 9 112790578 112819961 - MGP_129S1SvImJ_P0094908 Nbeal2 protein_coding protein_coding MGP_129S1SvImJ_T0094909.1 MGP_129S1SvImJ_G0035352.1 mouse_genomes_project 9 112790661 112819942 - MGP_129S1SvImJ_P0094909 Nbeal2 protein_coding protein_coding MGP_129S1SvImJ_T0094910.1 MGP_129S1SvImJ_G0035352.1 mouse_genomes_project 9 112790832 112804415 - MGP_129S1SvImJ_P0094910 Nbeal2 protein_coding protein_coding MGP_129S1SvImJ_T0094911.1 MGP_129S1SvImJ_G0035352.1 mouse_genomes_project 9 112790832 112797841 - MGP_129S1SvImJ_P0094911 Nbeal2 protein_coding protein_coding MGP_129S1SvImJ_T0094912.1 MGP_129S1SvImJ_G0035352.1 mouse_genomes_project 9 112794025 112794668 - Nbeal2 protein_coding retained_intron MGP_129S1SvImJ_T0094913.1 MGP_129S1SvImJ_G0035352.1 mouse_genomes_project 9 112794697 112795458 - Nbeal2 protein_coding retained_intron MGP_129S1SvImJ_T0094914.1 MGP_129S1SvImJ_G0035352.1 mouse_genomes_project 9 112795359 112800239 - MGP_129S1SvImJ_P0094914 Nbeal2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094915.1 MGP_129S1SvImJ_G0035352.1 mouse_genomes_project 9 112796855 112797670 - Nbeal2 protein_coding retained_intron MGP_129S1SvImJ_T0094916.1 MGP_129S1SvImJ_G0035352.1 mouse_genomes_project 9 112800417 112800885 - Nbeal2 protein_coding retained_intron MGP_129S1SvImJ_T0094917.1 MGP_129S1SvImJ_G0035352.1 mouse_genomes_project 9 112804115 112811170 - MGP_129S1SvImJ_P0094917 Nbeal2 protein_coding protein_coding MGP_129S1SvImJ_T0002471.1 MGP_129S1SvImJ_G0002380.1 mouse_genomes_project 9 105961448 105964430 - TEC TEC MGP_129S1SvImJ_T0091498.1 MGP_129S1SvImJ_G0034480.1 mouse_genomes_project 9 19459012 19460525 + MGP_129S1SvImJ_P0091498 Pigyl protein_coding protein_coding MGP_129S1SvImJ_T0091499.1 MGP_129S1SvImJ_G0034480.1 mouse_genomes_project 9 19459112 19460492 + MGP_129S1SvImJ_P0091499 Pigyl protein_coding protein_coding MGP_129S1SvImJ_T0091581.1 MGP_129S1SvImJ_G0034511.1 mouse_genomes_project 9 26547709 27561527 - MGP_129S1SvImJ_P0091581 Ntm protein_coding protein_coding MGP_129S1SvImJ_T0091582.1 MGP_129S1SvImJ_G0034511.1 mouse_genomes_project 9 26548961 26985030 - MGP_129S1SvImJ_P0091582 Ntm protein_coding protein_coding MGP_129S1SvImJ_T0091583.1 MGP_129S1SvImJ_G0034511.1 mouse_genomes_project 9 26549180 26567208 - MGP_129S1SvImJ_P0091583 Ntm protein_coding protein_coding MGP_129S1SvImJ_T0091584.1 MGP_129S1SvImJ_G0034511.1 mouse_genomes_project 9 26549443 26567208 - MGP_129S1SvImJ_P0091584 Ntm protein_coding protein_coding MGP_129S1SvImJ_T0091585.1 MGP_129S1SvImJ_G0034511.1 mouse_genomes_project 9 26562050 26984562 - MGP_129S1SvImJ_P0091585 Ntm protein_coding protein_coding MGP_129S1SvImJ_T0091586.1 MGP_129S1SvImJ_G0034511.1 mouse_genomes_project 9 26562176 26742302 - Ntm protein_coding processed_transcript MGP_129S1SvImJ_T0091587.1 MGP_129S1SvImJ_G0034511.1 mouse_genomes_project 9 26562199 26666648 - Ntm protein_coding processed_transcript MGP_129S1SvImJ_T0091588.1 MGP_129S1SvImJ_G0034511.1 mouse_genomes_project 9 26566186 27561528 - Ntm protein_coding retained_intron MGP_129S1SvImJ_T0091589.1 MGP_129S1SvImJ_G0034511.1 mouse_genomes_project 9 26733097 27561528 - Ntm protein_coding retained_intron MGP_129S1SvImJ_T0091590.1 MGP_129S1SvImJ_G0034511.1 mouse_genomes_project 9 26984413 27561517 - Ntm protein_coding processed_transcript MGP_129S1SvImJ_T0091591.1 MGP_129S1SvImJ_G0034511.1 mouse_genomes_project 9 27540241 27561539 - Ntm protein_coding processed_transcript MGP_129S1SvImJ_T0091206.1 MGP_129S1SvImJ_G0034354.1 mouse_genomes_project 9 11709722 11714315 - MGP_129S1SvImJ_P0091206 1700012B09Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091207.1 MGP_129S1SvImJ_G0034354.1 mouse_genomes_project 9 11709728 11723644 - MGP_129S1SvImJ_P0091207 1700012B09Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091208.1 MGP_129S1SvImJ_G0034354.1 mouse_genomes_project 9 11709730 11714271 - MGP_129S1SvImJ_P0091208 1700012B09Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091209.1 MGP_129S1SvImJ_G0034354.1 mouse_genomes_project 9 11711321 11723661 - MGP_129S1SvImJ_P0091209 1700012B09Rik protein_coding protein_coding MGP_129S1SvImJ_T0091210.1 MGP_129S1SvImJ_G0034354.1 mouse_genomes_project 9 11711321 11723644 - MGP_129S1SvImJ_P0091210 1700012B09Rik protein_coding protein_coding MGP_129S1SvImJ_T0094743.1 MGP_129S1SvImJ_G0035322.1 mouse_genomes_project 9 111014748 111032223 - MGP_129S1SvImJ_P0094743 Gm42641 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094745.1 MGP_129S1SvImJ_G0035322.1 mouse_genomes_project 9 111014751 111032272 - Gm42641 protein_coding retained_intron MGP_129S1SvImJ_T0094747.1 MGP_129S1SvImJ_G0035322.1 mouse_genomes_project 9 111015285 111017154 - MGP_129S1SvImJ_P0094747 Gm42641 protein_coding protein_coding MGP_129S1SvImJ_T0091850.1 MGP_129S1SvImJ_G0034617.1 mouse_genomes_project 9 36935202 36936133 + MGP_129S1SvImJ_P0091850 Olfr26 protein_coding protein_coding MGP_129S1SvImJ_T0091806.1 MGP_129S1SvImJ_G0034580.1 mouse_genomes_project 9 36070028 36070958 + MGP_129S1SvImJ_P0091806 Olfr883 protein_coding protein_coding MGP_129S1SvImJ_T0002451.1 MGP_129S1SvImJ_G0002360.1 mouse_genomes_project 9 102339528 102342553 + TEC TEC MGP_129S1SvImJ_T0094848.1 MGP_129S1SvImJ_G0035342.1 mouse_genomes_project 9 112249980 112281134 + MGP_129S1SvImJ_P0094848 Smarcc1 protein_coding protein_coding MGP_129S1SvImJ_T0094849.1 MGP_129S1SvImJ_G0035342.1 mouse_genomes_project 9 112266035 112378563 + MGP_129S1SvImJ_P0094849 Smarcc1 protein_coding protein_coding MGP_129S1SvImJ_T0094850.1 MGP_129S1SvImJ_G0035342.1 mouse_genomes_project 9 112266092 112349277 + Smarcc1 protein_coding retained_intron MGP_129S1SvImJ_T0094851.1 MGP_129S1SvImJ_G0035342.1 mouse_genomes_project 9 112266092 112318542 + MGP_129S1SvImJ_P0094851 Smarcc1 protein_coding protein_coding MGP_129S1SvImJ_T0094852.1 MGP_129S1SvImJ_G0035342.1 mouse_genomes_project 9 112266092 112373734 + MGP_129S1SvImJ_P0094852 Smarcc1 protein_coding protein_coding MGP_129S1SvImJ_T0094853.1 MGP_129S1SvImJ_G0035342.1 mouse_genomes_project 9 112266092 112378563 + MGP_129S1SvImJ_P0094853 Smarcc1 protein_coding protein_coding MGP_129S1SvImJ_T0094854.1 MGP_129S1SvImJ_G0035342.1 mouse_genomes_project 9 112319970 112341565 + Smarcc1 protein_coding retained_intron MGP_129S1SvImJ_T0094855.1 MGP_129S1SvImJ_G0035342.1 mouse_genomes_project 9 112373350 112375838 + MGP_129S1SvImJ_P0094855 Smarcc1 protein_coding protein_coding MGP_129S1SvImJ_T0094856.1 MGP_129S1SvImJ_G0035342.1 mouse_genomes_project 9 112374831 112375829 + Smarcc1 protein_coding retained_intron MGP_129S1SvImJ_T0092258.1 MGP_129S1SvImJ_G0034780.1 mouse_genomes_project 9 49471811 49480766 + MGP_129S1SvImJ_P0092258 Il18 protein_coding protein_coding MGP_129S1SvImJ_T0092259.1 MGP_129S1SvImJ_G0034780.1 mouse_genomes_project 9 49471811 49480766 + MGP_129S1SvImJ_P0092259 Il18 protein_coding protein_coding MGP_129S1SvImJ_T0091390.1 MGP_129S1SvImJ_G0034441.1 mouse_genomes_project 9 18286644 18314858 - MGP_129S1SvImJ_P0091390 Tyk2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091391.1 MGP_129S1SvImJ_G0034441.1 mouse_genomes_project 9 18286649 18310951 - MGP_129S1SvImJ_P0091391 Tyk2 protein_coding protein_coding MGP_129S1SvImJ_T0092422.1 MGP_129S1SvImJ_G0034832.1 mouse_genomes_project 9 53988631 54018728 + MGP_129S1SvImJ_P0092422 Hykk protein_coding protein_coding MGP_129S1SvImJ_T0092423.1 MGP_129S1SvImJ_G0034832.1 mouse_genomes_project 9 53988659 53997327 + Hykk protein_coding retained_intron MGP_129S1SvImJ_T0092424.1 MGP_129S1SvImJ_G0034832.1 mouse_genomes_project 9 53988660 54005814 + Hykk protein_coding retained_intron MGP_129S1SvImJ_T0092425.1 MGP_129S1SvImJ_G0034832.1 mouse_genomes_project 9 53988695 53990593 + Hykk protein_coding processed_transcript MGP_129S1SvImJ_T0011088.1 MGP_129S1SvImJ_G0009204.1 mouse_genomes_project 9 51080033 51080124 - Gm27686 miRNA miRNA MGP_129S1SvImJ_T0018579.1 MGP_129S1SvImJ_G0015745.1 mouse_genomes_project 9 75111278 75116170 + Gm16551 processed_transcript lincRNA MGP_129S1SvImJ_T0018580.1 MGP_129S1SvImJ_G0015745.1 mouse_genomes_project 9 75111730 75124605 + Gm16551 processed_transcript lincRNA MGP_129S1SvImJ_T0018581.1 MGP_129S1SvImJ_G0015745.1 mouse_genomes_project 9 75111796 75112661 + Gm16551 processed_transcript retained_intron MGP_129S1SvImJ_T0018582.1 MGP_129S1SvImJ_G0015745.1 mouse_genomes_project 9 75111819 75116169 + Gm16551 processed_transcript lincRNA MGP_129S1SvImJ_T0018583.1 MGP_129S1SvImJ_G0015745.1 mouse_genomes_project 9 75112288 75114501 + Gm16551 processed_transcript retained_intron MGP_129S1SvImJ_T0101462.1 MGP_129S1SvImJ_G0039529.1 mouse_genomes_project 9 63822430 63822529 + Gm23136 snoRNA snoRNA MGP_129S1SvImJ_T0093727.1 MGP_129S1SvImJ_G0035147.1 mouse_genomes_project 9 98051581 98124064 - MGP_129S1SvImJ_P0093727 Pxylp1 protein_coding protein_coding MGP_129S1SvImJ_T0093728.1 MGP_129S1SvImJ_G0035147.1 mouse_genomes_project 9 98051589 98124080 - MGP_129S1SvImJ_P0093728 Pxylp1 protein_coding protein_coding MGP_129S1SvImJ_T0093729.1 MGP_129S1SvImJ_G0035147.1 mouse_genomes_project 9 98051589 98124125 - MGP_129S1SvImJ_P0093729 Pxylp1 protein_coding protein_coding MGP_129S1SvImJ_T0093730.1 MGP_129S1SvImJ_G0035147.1 mouse_genomes_project 9 98051831 98124084 - MGP_129S1SvImJ_P0093730 Pxylp1 protein_coding protein_coding MGP_129S1SvImJ_T0093731.1 MGP_129S1SvImJ_G0035147.1 mouse_genomes_project 9 98053661 98124079 - MGP_129S1SvImJ_P0093731 Pxylp1 protein_coding protein_coding MGP_129S1SvImJ_T0093732.1 MGP_129S1SvImJ_G0035147.1 mouse_genomes_project 9 98053832 98091292 - MGP_129S1SvImJ_P0093732 Pxylp1 protein_coding protein_coding MGP_129S1SvImJ_T0093733.1 MGP_129S1SvImJ_G0035147.1 mouse_genomes_project 9 98067313 98083313 - Pxylp1 protein_coding processed_transcript MGP_129S1SvImJ_T0093734.1 MGP_129S1SvImJ_G0035147.1 mouse_genomes_project 9 98067423 98127320 - MGP_129S1SvImJ_P0093734 Pxylp1 protein_coding protein_coding MGP_129S1SvImJ_T0093735.1 MGP_129S1SvImJ_G0035147.1 mouse_genomes_project 9 98068112 98124071 - Pxylp1 protein_coding retained_intron MGP_129S1SvImJ_T0093736.1 MGP_129S1SvImJ_G0035147.1 mouse_genomes_project 9 98068229 98091369 - MGP_129S1SvImJ_P0093736 Pxylp1 protein_coding protein_coding MGP_129S1SvImJ_T0093737.1 MGP_129S1SvImJ_G0035147.1 mouse_genomes_project 9 98084858 98091371 - Pxylp1 protein_coding processed_transcript MGP_129S1SvImJ_T0093738.1 MGP_129S1SvImJ_G0035147.1 mouse_genomes_project 9 98089192 98126741 - Pxylp1 protein_coding processed_transcript MGP_129S1SvImJ_T0093739.1 MGP_129S1SvImJ_G0035147.1 mouse_genomes_project 9 98122281 98124084 - Pxylp1 protein_coding retained_intron MGP_129S1SvImJ_T0101439.1 MGP_129S1SvImJ_G0039506.1 mouse_genomes_project 9 18059537 18059617 + Gm23008 snoRNA snoRNA MGP_129S1SvImJ_T0005490.1 MGP_129S1SvImJ_G0004643.1 mouse_genomes_project 9 70018637 70020206 - Gm28731 antisense antisense MGP_129S1SvImJ_T0094143.1 MGP_129S1SvImJ_G0035233.1 mouse_genomes_project 9 108273724 108275702 - MGP_129S1SvImJ_P0094143 Gpr62 protein_coding protein_coding MGP_129S1SvImJ_T0011083.1 MGP_129S1SvImJ_G0009199.1 mouse_genomes_project 9 43818293 43818358 - Mir7086 miRNA miRNA MGP_129S1SvImJ_T0092253.1 MGP_129S1SvImJ_G0034776.1 mouse_genomes_project 9 49383143 49395499 + MGP_129S1SvImJ_P0092253 Plet1 protein_coding protein_coding MGP_129S1SvImJ_T0092254.1 MGP_129S1SvImJ_G0034776.1 mouse_genomes_project 9 49383145 49391882 + MGP_129S1SvImJ_P0092254 Plet1 protein_coding protein_coding MGP_129S1SvImJ_T0092953.1 MGP_129S1SvImJ_G0034983.1 mouse_genomes_project 9 66827895 66831177 + MGP_129S1SvImJ_P0092953 Rps27l protein_coding protein_coding MGP_129S1SvImJ_T0092954.1 MGP_129S1SvImJ_G0034983.1 mouse_genomes_project 9 66827900 66831179 + MGP_129S1SvImJ_P0092954 Rps27l protein_coding protein_coding MGP_129S1SvImJ_T0092955.1 MGP_129S1SvImJ_G0034983.1 mouse_genomes_project 9 66827975 66831133 + MGP_129S1SvImJ_P0092955 Rps27l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092956.1 MGP_129S1SvImJ_G0034983.1 mouse_genomes_project 9 66828164 66831181 + Rps27l protein_coding processed_transcript MGP_129S1SvImJ_T0092957.1 MGP_129S1SvImJ_G0034983.1 mouse_genomes_project 9 66829451 66831133 + MGP_129S1SvImJ_P0092957 Rps27l protein_coding protein_coding MGP_129S1SvImJ_T0092958.1 MGP_129S1SvImJ_G0034983.1 mouse_genomes_project 9 66830227 66831176 + Rps27l protein_coding retained_intron MGP_129S1SvImJ_T0092531.1 MGP_129S1SvImJ_G0034860.1 mouse_genomes_project 9 56311789 56317121 - MGP_129S1SvImJ_P0092531 Neil1 protein_coding protein_coding MGP_129S1SvImJ_T0092532.1 MGP_129S1SvImJ_G0034860.1 mouse_genomes_project 9 56312059 56317299 - MGP_129S1SvImJ_P0092532 Neil1 protein_coding protein_coding MGP_129S1SvImJ_T0092533.1 MGP_129S1SvImJ_G0034860.1 mouse_genomes_project 9 56312245 56316028 - MGP_129S1SvImJ_P0092533 Neil1 protein_coding protein_coding MGP_129S1SvImJ_T0091833.1 MGP_129S1SvImJ_G0034606.1 mouse_genomes_project 9 36647338 36649562 + MGP_129S1SvImJ_P0091833 Olfr913 protein_coding protein_coding MGP_129S1SvImJ_T0009266.1 MGP_129S1SvImJ_G0007447.1 mouse_genomes_project 9 63678560 63682832 + 1110036E04Rik lincRNA lincRNA MGP_129S1SvImJ_T0093591.1 MGP_129S1SvImJ_G0035121.1 mouse_genomes_project 9 91105444 91147715 + MGP_129S1SvImJ_P0093591 Adamts7 protein_coding protein_coding MGP_129S1SvImJ_T0093592.1 MGP_129S1SvImJ_G0035121.1 mouse_genomes_project 9 91105453 91155685 + MGP_129S1SvImJ_P0093592 Adamts7 protein_coding protein_coding MGP_129S1SvImJ_T0093593.1 MGP_129S1SvImJ_G0035121.1 mouse_genomes_project 9 91105499 91147715 + MGP_129S1SvImJ_P0093593 Adamts7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093594.1 MGP_129S1SvImJ_G0035121.1 mouse_genomes_project 9 91105577 91147605 + MGP_129S1SvImJ_P0093594 Adamts7 protein_coding protein_coding MGP_129S1SvImJ_T0093595.1 MGP_129S1SvImJ_G0035121.1 mouse_genomes_project 9 91105601 91147717 + MGP_129S1SvImJ_P0093595 Adamts7 protein_coding protein_coding MGP_129S1SvImJ_T0093596.1 MGP_129S1SvImJ_G0035121.1 mouse_genomes_project 9 91136270 91139181 + Adamts7 protein_coding retained_intron MGP_129S1SvImJ_T0093597.1 MGP_129S1SvImJ_G0035121.1 mouse_genomes_project 9 91138599 91141103 + Adamts7 protein_coding processed_transcript MGP_129S1SvImJ_T0093598.1 MGP_129S1SvImJ_G0035121.1 mouse_genomes_project 9 91142743 91147712 + Adamts7 protein_coding retained_intron MGP_129S1SvImJ_T0009243.1 MGP_129S1SvImJ_G0007429.1 mouse_genomes_project 9 42581807 42598429 - Gm10687 lincRNA lincRNA MGP_129S1SvImJ_T0016086.1 MGP_129S1SvImJ_G0014175.1 mouse_genomes_project 9 77158522 77159420 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002370.1 MGP_129S1SvImJ_G0002280.1 mouse_genomes_project 9 22104776 22106630 - TEC TEC MGP_129S1SvImJ_T0011093.1 MGP_129S1SvImJ_G0009209.1 mouse_genomes_project 9 61642551 61642628 - Mir5133 miRNA miRNA MGP_129S1SvImJ_T0002495.1 MGP_129S1SvImJ_G0002404.1 mouse_genomes_project 9 121070435 121071273 - TEC TEC MGP_129S1SvImJ_T0011069.1 MGP_129S1SvImJ_G0009185.1 mouse_genomes_project 9 18716921 18716991 - Mir199a-1 miRNA miRNA MGP_129S1SvImJ_T0091143.1 MGP_129S1SvImJ_G0034332.1 mouse_genomes_project 9 4916835 4940179 - MGP_129S1SvImJ_P0091143 9230110C19Rik protein_coding protein_coding MGP_129S1SvImJ_T0005545.1 MGP_129S1SvImJ_G0004681.1 mouse_genomes_project 9 108260534 108261272 - Gm28959 antisense antisense MGP_129S1SvImJ_T0093065.1 MGP_129S1SvImJ_G0035007.1 mouse_genomes_project 9 71326579 71408944 + MGP_129S1SvImJ_P0093065 Aldh1a2 protein_coding protein_coding MGP_129S1SvImJ_T0016175.1 MGP_129S1SvImJ_G0014264.1 mouse_genomes_project 9 124171291 124171639 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016153.1 MGP_129S1SvImJ_G0014242.1 mouse_genomes_project 9 104116275 104117776 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0092393.1 MGP_129S1SvImJ_G0034821.1 mouse_genomes_project 9 53201810 53232631 - MGP_129S1SvImJ_P0092393 Cyp19a1 protein_coding protein_coding MGP_129S1SvImJ_T0093340.1 MGP_129S1SvImJ_G0035069.1 mouse_genomes_project 9 78936595 78950443 - MGP_129S1SvImJ_P0093340 Mb21d1 protein_coding protein_coding MGP_129S1SvImJ_T0093341.1 MGP_129S1SvImJ_G0035069.1 mouse_genomes_project 9 78937405 78950476 - MGP_129S1SvImJ_P0093341 Mb21d1 protein_coding protein_coding MGP_129S1SvImJ_T0093342.1 MGP_129S1SvImJ_G0035069.1 mouse_genomes_project 9 78937855 78950124 - MGP_129S1SvImJ_P0093342 Mb21d1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0005493.1 MGP_129S1SvImJ_G0004645.1 mouse_genomes_project 9 72603920 72604622 - Gm27231 antisense antisense MGP_129S1SvImJ_T0092241.1 MGP_129S1SvImJ_G0034770.1 mouse_genomes_project 9 48086536 48096748 + MGP_129S1SvImJ_P0092241 Gm4894 protein_coding protein_coding MGP_129S1SvImJ_T0091482.1 MGP_129S1SvImJ_G0034473.1 mouse_genomes_project 9 19278347 19291432 + MGP_129S1SvImJ_P0091482 Prkcsh protein_coding protein_coding MGP_129S1SvImJ_T0091483.1 MGP_129S1SvImJ_G0034473.1 mouse_genomes_project 9 19278347 19291432 + MGP_129S1SvImJ_P0091483 Prkcsh protein_coding protein_coding MGP_129S1SvImJ_T0092376.1 MGP_129S1SvImJ_G0034814.1 mouse_genomes_project 9 52647526 52707061 - MGP_129S1SvImJ_P0092376 Cul5 protein_coding protein_coding MGP_129S1SvImJ_T0092377.1 MGP_129S1SvImJ_G0034814.1 mouse_genomes_project 9 52647526 52709568 - MGP_129S1SvImJ_P0092377 Cul5 protein_coding protein_coding MGP_129S1SvImJ_T0092378.1 MGP_129S1SvImJ_G0034814.1 mouse_genomes_project 9 52649544 52655591 - Cul5 protein_coding retained_intron MGP_129S1SvImJ_T0092379.1 MGP_129S1SvImJ_G0034814.1 mouse_genomes_project 9 52649968 52707065 - MGP_129S1SvImJ_P0092379 Cul5 protein_coding protein_coding MGP_129S1SvImJ_T0092380.1 MGP_129S1SvImJ_G0034814.1 mouse_genomes_project 9 52651372 52706840 - MGP_129S1SvImJ_P0092380 Cul5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0092381.1 MGP_129S1SvImJ_G0034814.1 mouse_genomes_project 9 52663617 52683704 - Cul5 protein_coding retained_intron MGP_129S1SvImJ_T0092382.1 MGP_129S1SvImJ_G0034814.1 mouse_genomes_project 9 52668307 52707041 - Cul5 protein_coding retained_intron MGP_129S1SvImJ_T0092383.1 MGP_129S1SvImJ_G0034814.1 mouse_genomes_project 9 52678382 52683800 - Cul5 protein_coding retained_intron MGP_129S1SvImJ_T0092384.1 MGP_129S1SvImJ_G0034814.1 mouse_genomes_project 9 52683558 52693643 - Cul5 protein_coding processed_transcript MGP_129S1SvImJ_T0092385.1 MGP_129S1SvImJ_G0034814.1 mouse_genomes_project 9 52690314 52706626 - MGP_129S1SvImJ_P0092385 Cul5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0016039.1 MGP_129S1SvImJ_G0014128.1 mouse_genomes_project 9 31720531 31720763 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016137.1 MGP_129S1SvImJ_G0014226.1 mouse_genomes_project 9 97790371 97790576 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018546.1 MGP_129S1SvImJ_G0015735.1 mouse_genomes_project 9 39015719 39019088 - Gm16096 processed_transcript processed_transcript MGP_129S1SvImJ_T0018547.1 MGP_129S1SvImJ_G0015735.1 mouse_genomes_project 9 39015725 39018364 - Gm16096 processed_transcript processed_transcript MGP_129S1SvImJ_T0093844.1 MGP_129S1SvImJ_G0035178.1 mouse_genomes_project 9 101994690 102013593 - MGP_129S1SvImJ_P0093844 Slc35g2 protein_coding protein_coding MGP_129S1SvImJ_T0093845.1 MGP_129S1SvImJ_G0035178.1 mouse_genomes_project 9 101994692 101995418 - Slc35g2 protein_coding processed_transcript MGP_129S1SvImJ_T0016167.1 MGP_129S1SvImJ_G0014256.1 mouse_genomes_project 9 112034223 112034623 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0092948.1 MGP_129S1SvImJ_G0034979.1 mouse_genomes_project 9 66635605 66662079 - MGP_129S1SvImJ_P0092948 Aph1b protein_coding protein_coding MGP_129S1SvImJ_T0092949.1 MGP_129S1SvImJ_G0034979.1 mouse_genomes_project 9 66644619 66661954 - MGP_129S1SvImJ_P0092949 Aph1b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0094378.1 MGP_129S1SvImJ_G0035270.1 mouse_genomes_project 9 109676569 109785789 - MGP_129S1SvImJ_P0094378 Rbm6 protein_coding protein_coding MGP_129S1SvImJ_T0094379.1 MGP_129S1SvImJ_G0035270.1 mouse_genomes_project 9 109676573 109785781 - MGP_129S1SvImJ_P0094379 Rbm6 protein_coding protein_coding MGP_129S1SvImJ_T0094380.1 MGP_129S1SvImJ_G0035270.1 mouse_genomes_project 9 109676577 109785723 - MGP_129S1SvImJ_P0094380 Rbm6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094381.1 MGP_129S1SvImJ_G0035270.1 mouse_genomes_project 9 109681125 109685448 - Rbm6 protein_coding retained_intron MGP_129S1SvImJ_T0094382.1 MGP_129S1SvImJ_G0035270.1 mouse_genomes_project 9 109694659 109698669 - Rbm6 protein_coding retained_intron MGP_129S1SvImJ_T0094383.1 MGP_129S1SvImJ_G0035270.1 mouse_genomes_project 9 109694892 109699177 - MGP_129S1SvImJ_P0094383 Rbm6 protein_coding protein_coding MGP_129S1SvImJ_T0094384.1 MGP_129S1SvImJ_G0035270.1 mouse_genomes_project 9 109699185 109785693 - MGP_129S1SvImJ_P0094384 Rbm6 protein_coding protein_coding MGP_129S1SvImJ_T0094385.1 MGP_129S1SvImJ_G0035270.1 mouse_genomes_project 9 109707697 109785695 - Rbm6 protein_coding processed_transcript MGP_129S1SvImJ_T0094386.1 MGP_129S1SvImJ_G0035270.1 mouse_genomes_project 9 109719067 109757553 - Rbm6 protein_coding processed_transcript MGP_129S1SvImJ_T0094387.1 MGP_129S1SvImJ_G0035270.1 mouse_genomes_project 9 109740630 109785704 - Rbm6 protein_coding retained_intron MGP_129S1SvImJ_T0094388.1 MGP_129S1SvImJ_G0035270.1 mouse_genomes_project 9 109757438 109761928 - Rbm6 protein_coding retained_intron MGP_129S1SvImJ_T0094389.1 MGP_129S1SvImJ_G0035270.1 mouse_genomes_project 9 109765874 109785735 - MGP_129S1SvImJ_P0094389 Rbm6 protein_coding protein_coding MGP_129S1SvImJ_T0094390.1 MGP_129S1SvImJ_G0035270.1 mouse_genomes_project 9 109765925 109785381 - MGP_129S1SvImJ_P0094390 Rbm6 protein_coding protein_coding MGP_129S1SvImJ_T0094391.1 MGP_129S1SvImJ_G0035270.1 mouse_genomes_project 9 109771701 109785682 - Rbm6 protein_coding retained_intron MGP_129S1SvImJ_T0094392.1 MGP_129S1SvImJ_G0035270.1 mouse_genomes_project 9 109781798 109786197 - Rbm6 protein_coding retained_intron MGP_129S1SvImJ_T0091799.1 MGP_129S1SvImJ_G0034573.1 mouse_genomes_project 9 35759387 35760209 + MGP_129S1SvImJ_P0091799 protein_coding protein_coding MGP_129S1SvImJ_T0093083.1 MGP_129S1SvImJ_G0035012.1 mouse_genomes_project 9 71980517 72253021 - MGP_129S1SvImJ_P0093083 Tcf12 protein_coding protein_coding MGP_129S1SvImJ_T0093084.1 MGP_129S1SvImJ_G0035012.1 mouse_genomes_project 9 71982073 72036549 - Tcf12 protein_coding retained_intron MGP_129S1SvImJ_T0093085.1 MGP_129S1SvImJ_G0035012.1 mouse_genomes_project 9 71982089 72252995 - MGP_129S1SvImJ_P0093085 Tcf12 protein_coding protein_coding MGP_129S1SvImJ_T0093086.1 MGP_129S1SvImJ_G0035012.1 mouse_genomes_project 9 71982094 72036857 - MGP_129S1SvImJ_P0093086 Tcf12 protein_coding protein_coding MGP_129S1SvImJ_T0093087.1 MGP_129S1SvImJ_G0035012.1 mouse_genomes_project 9 71982098 72252980 - MGP_129S1SvImJ_P0093087 Tcf12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093088.1 MGP_129S1SvImJ_G0035012.1 mouse_genomes_project 9 71982544 72252824 - MGP_129S1SvImJ_P0093088 Tcf12 protein_coding protein_coding MGP_129S1SvImJ_T0093089.1 MGP_129S1SvImJ_G0035012.1 mouse_genomes_project 9 71983333 72253045 - MGP_129S1SvImJ_P0093089 Tcf12 protein_coding protein_coding MGP_129S1SvImJ_T0093090.1 MGP_129S1SvImJ_G0035012.1 mouse_genomes_project 9 71987718 72036552 - MGP_129S1SvImJ_P0093090 Tcf12 protein_coding protein_coding MGP_129S1SvImJ_T0093091.1 MGP_129S1SvImJ_G0035012.1 mouse_genomes_project 9 71987721 72252986 - MGP_129S1SvImJ_P0093091 Tcf12 protein_coding protein_coding MGP_129S1SvImJ_T0093092.1 MGP_129S1SvImJ_G0035012.1 mouse_genomes_project 9 71996427 72252375 - MGP_129S1SvImJ_P0093092 Tcf12 protein_coding protein_coding MGP_129S1SvImJ_T0093093.1 MGP_129S1SvImJ_G0035012.1 mouse_genomes_project 9 72007794 72024281 - Tcf12 protein_coding processed_transcript MGP_129S1SvImJ_T0093094.1 MGP_129S1SvImJ_G0035012.1 mouse_genomes_project 9 72015560 72250945 - MGP_129S1SvImJ_P0093094 Tcf12 protein_coding protein_coding MGP_129S1SvImJ_T0093095.1 MGP_129S1SvImJ_G0035012.1 mouse_genomes_project 9 72015560 72036448 - MGP_129S1SvImJ_P0093095 Tcf12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093096.1 MGP_129S1SvImJ_G0035012.1 mouse_genomes_project 9 72022301 72136157 - MGP_129S1SvImJ_P0093096 Tcf12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093097.1 MGP_129S1SvImJ_G0035012.1 mouse_genomes_project 9 72022691 72136155 - MGP_129S1SvImJ_P0093097 Tcf12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093098.1 MGP_129S1SvImJ_G0035012.1 mouse_genomes_project 9 72023312 72252945 - MGP_129S1SvImJ_P0093098 Tcf12 protein_coding protein_coding MGP_129S1SvImJ_T0093099.1 MGP_129S1SvImJ_G0035012.1 mouse_genomes_project 9 72023333 72252773 - MGP_129S1SvImJ_P0093099 Tcf12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093100.1 MGP_129S1SvImJ_G0035012.1 mouse_genomes_project 9 72024006 72063770 - MGP_129S1SvImJ_P0093100 Tcf12 protein_coding protein_coding MGP_129S1SvImJ_T0093101.1 MGP_129S1SvImJ_G0035012.1 mouse_genomes_project 9 72024784 72252965 - MGP_129S1SvImJ_P0093101 Tcf12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093102.1 MGP_129S1SvImJ_G0035012.1 mouse_genomes_project 9 72084180 72253021 - Tcf12 protein_coding retained_intron MGP_129S1SvImJ_T0093103.1 MGP_129S1SvImJ_G0035012.1 mouse_genomes_project 9 72247360 72251702 - Tcf12 protein_coding retained_intron MGP_129S1SvImJ_T0100210.1 MGP_129S1SvImJ_G0038277.1 mouse_genomes_project 9 105155648 105155751 - Gm26360 snRNA snRNA MGP_129S1SvImJ_T0002431.1 MGP_129S1SvImJ_G0002340.1 mouse_genomes_project 9 92131009 92132926 - TEC TEC MGP_129S1SvImJ_T0093302.1 MGP_129S1SvImJ_G0035056.1 mouse_genomes_project 9 78518149 78531284 + MGP_129S1SvImJ_P0093302 Gcm1 protein_coding protein_coding MGP_129S1SvImJ_T0094257.1 MGP_129S1SvImJ_G0035257.1 mouse_genomes_project 9 109427026 109437669 + MGP_129S1SvImJ_P0094257 Rassf1 protein_coding protein_coding MGP_129S1SvImJ_T0094258.1 MGP_129S1SvImJ_G0035257.1 mouse_genomes_project 9 109427033 109429978 + Rassf1 protein_coding retained_intron MGP_129S1SvImJ_T0094259.1 MGP_129S1SvImJ_G0035257.1 mouse_genomes_project 9 109427038 109437665 + MGP_129S1SvImJ_P0094259 Rassf1 protein_coding protein_coding MGP_129S1SvImJ_T0094260.1 MGP_129S1SvImJ_G0035257.1 mouse_genomes_project 9 109427061 109437665 + MGP_129S1SvImJ_P0094260 Rassf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094261.1 MGP_129S1SvImJ_G0035257.1 mouse_genomes_project 9 109430054 109437665 + MGP_129S1SvImJ_P0094261 Rassf1 protein_coding protein_coding MGP_129S1SvImJ_T0094262.1 MGP_129S1SvImJ_G0035257.1 mouse_genomes_project 9 109430794 109433214 + Rassf1 protein_coding processed_transcript MGP_129S1SvImJ_T0094263.1 MGP_129S1SvImJ_G0035257.1 mouse_genomes_project 9 109432024 109437665 + Rassf1 protein_coding processed_transcript MGP_129S1SvImJ_T0094264.1 MGP_129S1SvImJ_G0035257.1 mouse_genomes_project 9 109432156 109437665 + Rassf1 protein_coding retained_intron MGP_129S1SvImJ_T0094265.1 MGP_129S1SvImJ_G0035257.1 mouse_genomes_project 9 109433348 109437233 + Rassf1 protein_coding retained_intron MGP_129S1SvImJ_T0094266.1 MGP_129S1SvImJ_G0035257.1 mouse_genomes_project 9 109433355 109435829 + Rassf1 protein_coding retained_intron MGP_129S1SvImJ_T0092175.1 MGP_129S1SvImJ_G0034746.1 mouse_genomes_project 9 44572513 44593914 - MGP_129S1SvImJ_P0092175 Pafah1b2 protein_coding protein_coding MGP_129S1SvImJ_T0092779.1 MGP_129S1SvImJ_G0034933.1 mouse_genomes_project 9 63574822 63648032 - MGP_129S1SvImJ_P0092779 Smad6 protein_coding protein_coding MGP_129S1SvImJ_T0092780.1 MGP_129S1SvImJ_G0034933.1 mouse_genomes_project 9 63575756 63642960 - Smad6 protein_coding processed_transcript MGP_129S1SvImJ_T0092781.1 MGP_129S1SvImJ_G0034933.1 mouse_genomes_project 9 63647733 63648005 - MGP_129S1SvImJ_P0092781 Smad6 protein_coding protein_coding MGP_129S1SvImJ_T0018541.1 MGP_129S1SvImJ_G0015733.1 mouse_genomes_project 9 33982101 33984746 - Gm3428 processed_transcript TEC MGP_129S1SvImJ_T0018542.1 MGP_129S1SvImJ_G0015733.1 mouse_genomes_project 9 33982782 33984690 - Gm3428 processed_transcript lincRNA MGP_129S1SvImJ_T0018543.1 MGP_129S1SvImJ_G0015733.1 mouse_genomes_project 9 33982823 33984742 - Gm3428 processed_transcript lincRNA MGP_129S1SvImJ_T0018594.1 MGP_129S1SvImJ_G0015751.1 mouse_genomes_project 9 89401407 89403807 - Snhg5 processed_transcript lincRNA MGP_129S1SvImJ_T0018595.1 MGP_129S1SvImJ_G0015751.1 mouse_genomes_project 9 89401409 89403768 - Snhg5 processed_transcript lincRNA MGP_129S1SvImJ_T0018596.1 MGP_129S1SvImJ_G0015751.1 mouse_genomes_project 9 89401414 89402843 - Snhg5 processed_transcript lincRNA MGP_129S1SvImJ_T0091112.1 MGP_129S1SvImJ_G0034324.1 mouse_genomes_project 9 4420806 4430841 + MGP_129S1SvImJ_P0091112 Mmp8 protein_coding protein_coding MGP_129S1SvImJ_T0002480.1 MGP_129S1SvImJ_G0002389.1 mouse_genomes_project 9 110127598 110128420 - TEC TEC MGP_129S1SvImJ_T0016161.1 MGP_129S1SvImJ_G0014250.1 mouse_genomes_project 9 108903981 108905184 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0093955.1 MGP_129S1SvImJ_G0035200.1 mouse_genomes_project 9 105051625 105106243 - MGP_129S1SvImJ_P0093955 Bfsp2 protein_coding protein_coding MGP_129S1SvImJ_T0093956.1 MGP_129S1SvImJ_G0035200.1 mouse_genomes_project 9 105051629 105080969 - Bfsp2 protein_coding processed_transcript MGP_129S1SvImJ_T0091477.1 MGP_129S1SvImJ_G0034470.1 mouse_genomes_project 9 19232965 19237643 - MGP_129S1SvImJ_P0091477 Epor protein_coding protein_coding MGP_129S1SvImJ_T0091478.1 MGP_129S1SvImJ_G0034470.1 mouse_genomes_project 9 19233125 19236713 - MGP_129S1SvImJ_P0091478 Epor protein_coding unknown_likely_coding MGP_129S1SvImJ_T0101987.1 MGP_129S1SvImJ_G0035402.1 mouse_genomes_project 9 120549741 120671026 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101988.1 MGP_129S1SvImJ_G0035402.1 mouse_genomes_project 9 120591087 120671188 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101989.1 MGP_129S1SvImJ_G0035402.1 mouse_genomes_project 9 120640768 120671188 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101990.1 MGP_129S1SvImJ_G0035402.1 mouse_genomes_project 9 120669848 120695800 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0005519.1 MGP_129S1SvImJ_G0004662.1 mouse_genomes_project 9 97100217 97118286 - Gm16794 antisense antisense MGP_129S1SvImJ_T0005520.1 MGP_129S1SvImJ_G0004662.1 mouse_genomes_project 9 97101103 97113535 - Gm16794 antisense antisense MGP_129S1SvImJ_T0005521.1 MGP_129S1SvImJ_G0004662.1 mouse_genomes_project 9 97103154 97113544 - Gm16794 antisense antisense MGP_129S1SvImJ_T0005522.1 MGP_129S1SvImJ_G0004662.1 mouse_genomes_project 9 97103841 97114293 - Gm16794 antisense antisense MGP_129S1SvImJ_T0100177.1 MGP_129S1SvImJ_G0038244.1 mouse_genomes_project 9 54673760 54673851 - Gm23407 snRNA snRNA MGP_129S1SvImJ_T0011123.1 MGP_129S1SvImJ_G0009239.1 mouse_genomes_project 9 110915337 110915419 + Mir711 miRNA miRNA MGP_129S1SvImJ_T0011128.1 MGP_129S1SvImJ_G0009244.1 mouse_genomes_project 9 114381690 114381766 - Mir128-2 miRNA miRNA MGP_129S1SvImJ_T0094538.1 MGP_129S1SvImJ_G0035298.1 mouse_genomes_project 9 110406334 110420230 - MGP_129S1SvImJ_P0094538 Klhdc8b protein_coding protein_coding MGP_129S1SvImJ_T0094539.1 MGP_129S1SvImJ_G0035298.1 mouse_genomes_project 9 110406356 110411409 - Klhdc8b protein_coding retained_intron MGP_129S1SvImJ_T0094540.1 MGP_129S1SvImJ_G0035298.1 mouse_genomes_project 9 110406356 110409495 - Klhdc8b protein_coding retained_intron MGP_129S1SvImJ_T0094541.1 MGP_129S1SvImJ_G0035298.1 mouse_genomes_project 9 110406356 110411068 - MGP_129S1SvImJ_P0094541 Klhdc8b protein_coding protein_coding MGP_129S1SvImJ_T0094542.1 MGP_129S1SvImJ_G0035298.1 mouse_genomes_project 9 110406530 110411095 - MGP_129S1SvImJ_P0094542 Klhdc8b protein_coding protein_coding MGP_129S1SvImJ_T0094543.1 MGP_129S1SvImJ_G0035298.1 mouse_genomes_project 9 110406671 110419725 - MGP_129S1SvImJ_P0094543 Klhdc8b protein_coding protein_coding MGP_129S1SvImJ_T0094544.1 MGP_129S1SvImJ_G0035298.1 mouse_genomes_project 9 110406966 110409060 - Klhdc8b protein_coding processed_transcript MGP_129S1SvImJ_T0094545.1 MGP_129S1SvImJ_G0035298.1 mouse_genomes_project 9 110409945 110411457 - Klhdc8b protein_coding processed_transcript MGP_129S1SvImJ_T0094546.1 MGP_129S1SvImJ_G0035298.1 mouse_genomes_project 9 110409966 110411492 - Klhdc8b protein_coding retained_intron MGP_129S1SvImJ_T0094547.1 MGP_129S1SvImJ_G0035298.1 mouse_genomes_project 9 110411278 110419578 - Klhdc8b protein_coding processed_transcript MGP_129S1SvImJ_T0094548.1 MGP_129S1SvImJ_G0035298.1 mouse_genomes_project 9 110413363 110419578 - Klhdc8b protein_coding retained_intron MGP_129S1SvImJ_T0094549.1 MGP_129S1SvImJ_G0035298.1 mouse_genomes_project 9 110413365 110415587 - Klhdc8b protein_coding retained_intron MGP_129S1SvImJ_T0094550.1 MGP_129S1SvImJ_G0035298.1 mouse_genomes_project 9 110413556 110419722 - Klhdc8b protein_coding processed_transcript MGP_129S1SvImJ_T0094551.1 MGP_129S1SvImJ_G0035298.1 mouse_genomes_project 9 110417083 110418727 - Klhdc8b protein_coding retained_intron MGP_129S1SvImJ_T0094552.1 MGP_129S1SvImJ_G0035298.1 mouse_genomes_project 9 110417880 110419577 - Klhdc8b protein_coding retained_intron MGP_129S1SvImJ_T0009263.1 MGP_129S1SvImJ_G0007445.1 mouse_genomes_project 9 60830981 60832378 - Gm10655 lincRNA lincRNA MGP_129S1SvImJ_T0009264.1 MGP_129S1SvImJ_G0007445.1 mouse_genomes_project 9 60831062 60831812 - Gm10655 lincRNA lincRNA MGP_129S1SvImJ_T0100162.1 MGP_129S1SvImJ_G0038229.1 mouse_genomes_project 9 27905074 27905181 - Gm26435 snRNA snRNA MGP_129S1SvImJ_T0091885.1 MGP_129S1SvImJ_G0034646.1 mouse_genomes_project 9 37918714 37919741 - MGP_129S1SvImJ_P0091885 Olfr968 protein_coding protein_coding MGP_129S1SvImJ_T0092137.1 MGP_129S1SvImJ_G0034739.1 mouse_genomes_project 9 43990837 44334775 + MGP_129S1SvImJ_P0092137 Dscaml1 protein_coding protein_coding MGP_129S1SvImJ_T0092782.1 MGP_129S1SvImJ_G0034934.1 mouse_genomes_project 9 63750272 63773865 + MGP_129S1SvImJ_P0092782 Lctl protein_coding protein_coding MGP_129S1SvImJ_T0092783.1 MGP_129S1SvImJ_G0034934.1 mouse_genomes_project 9 63750297 63751261 + Lctl protein_coding retained_intron MGP_129S1SvImJ_T0092784.1 MGP_129S1SvImJ_G0034934.1 mouse_genomes_project 9 63750354 63751137 + Lctl protein_coding processed_transcript MGP_129S1SvImJ_T0092785.1 MGP_129S1SvImJ_G0034934.1 mouse_genomes_project 9 63750384 63773861 + MGP_129S1SvImJ_P0092785 Lctl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092786.1 MGP_129S1SvImJ_G0034934.1 mouse_genomes_project 9 63754743 63773852 + MGP_129S1SvImJ_P0092786 Lctl protein_coding protein_coding MGP_129S1SvImJ_T0092787.1 MGP_129S1SvImJ_G0034934.1 mouse_genomes_project 9 63755166 63759904 + Lctl protein_coding retained_intron MGP_129S1SvImJ_T0094496.1 MGP_129S1SvImJ_G0035288.1 mouse_genomes_project 9 110142935 110207986 - MGP_129S1SvImJ_P0094496 Dag1 protein_coding protein_coding MGP_129S1SvImJ_T0094497.1 MGP_129S1SvImJ_G0035288.1 mouse_genomes_project 9 110144245 110207843 - MGP_129S1SvImJ_P0094497 Dag1 protein_coding protein_coding MGP_129S1SvImJ_T0094498.1 MGP_129S1SvImJ_G0035288.1 mouse_genomes_project 9 110144256 110207946 - MGP_129S1SvImJ_P0094498 Dag1 protein_coding protein_coding MGP_129S1SvImJ_T0094499.1 MGP_129S1SvImJ_G0035288.1 mouse_genomes_project 9 110144259 110207764 - MGP_129S1SvImJ_P0094499 Dag1 protein_coding protein_coding MGP_129S1SvImJ_T0094500.1 MGP_129S1SvImJ_G0035288.1 mouse_genomes_project 9 110156478 110207779 - MGP_129S1SvImJ_P0094500 Dag1 protein_coding protein_coding MGP_129S1SvImJ_T0094501.1 MGP_129S1SvImJ_G0035288.1 mouse_genomes_project 9 110156516 110207737 - MGP_129S1SvImJ_P0094501 Dag1 protein_coding protein_coding MGP_129S1SvImJ_T0094502.1 MGP_129S1SvImJ_G0035288.1 mouse_genomes_project 9 110194516 110207779 - Dag1 protein_coding retained_intron MGP_129S1SvImJ_T0093619.1 MGP_129S1SvImJ_G0035126.1 mouse_genomes_project 9 93299451 93321551 + MGP_129S1SvImJ_P0093619 Plscr1 protein_coding protein_coding MGP_129S1SvImJ_T0093620.1 MGP_129S1SvImJ_G0035126.1 mouse_genomes_project 9 93300043 93321248 + MGP_129S1SvImJ_P0093620 Plscr1 protein_coding protein_coding MGP_129S1SvImJ_T0093621.1 MGP_129S1SvImJ_G0035126.1 mouse_genomes_project 9 93315541 93321250 + Plscr1 protein_coding retained_intron MGP_129S1SvImJ_T0005511.1 MGP_129S1SvImJ_G0004658.1 mouse_genomes_project 9 95820290 95826907 - Gm16262 antisense antisense MGP_129S1SvImJ_T0095018.1 MGP_129S1SvImJ_G0035374.1 mouse_genomes_project 9 113679875 113730629 + MGP_129S1SvImJ_P0095018 Dclk3 protein_coding protein_coding MGP_129S1SvImJ_T0093339.1 MGP_129S1SvImJ_G0035068.1 mouse_genomes_project 9 78900434 78928560 + MGP_129S1SvImJ_P0093339 Ddx43 protein_coding protein_coding MGP_129S1SvImJ_T0009361.1 MGP_129S1SvImJ_G0007521.1 mouse_genomes_project 9 123816789 123818268 - 1700020M21Rik lincRNA lincRNA MGP_129S1SvImJ_T0095358.1 MGP_129S1SvImJ_G0035478.1 mouse_genomes_project 9 126584898 126646022 + MGP_129S1SvImJ_P0095358 Sacm1l protein_coding protein_coding MGP_129S1SvImJ_T0095359.1 MGP_129S1SvImJ_G0035478.1 mouse_genomes_project 9 126584906 126646027 + MGP_129S1SvImJ_P0095359 Sacm1l protein_coding unknown_likely_coding MGP_129S1SvImJ_T0016055.1 MGP_129S1SvImJ_G0014144.1 mouse_genomes_project 9 54398566 54399659 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0093568.1 MGP_129S1SvImJ_G0035118.1 mouse_genomes_project 9 90834444 90840381 + MGP_129S1SvImJ_P0093568 Rasgrf1 protein_coding protein_coding MGP_129S1SvImJ_T0093569.1 MGP_129S1SvImJ_G0035118.1 mouse_genomes_project 9 90834445 90840368 + MGP_129S1SvImJ_P0093569 Rasgrf1 protein_coding protein_coding MGP_129S1SvImJ_T0093570.1 MGP_129S1SvImJ_G0035118.1 mouse_genomes_project 9 90834445 90952763 + MGP_129S1SvImJ_P0093570 Rasgrf1 protein_coding protein_coding MGP_129S1SvImJ_T0093571.1 MGP_129S1SvImJ_G0035118.1 mouse_genomes_project 9 90834448 90851302 + Rasgrf1 protein_coding retained_intron MGP_129S1SvImJ_T0093633.1 MGP_129S1SvImJ_G0035130.1 mouse_genomes_project 9 93600563 93672008 + MGP_129S1SvImJ_P0093633 Plod2 protein_coding protein_coding MGP_129S1SvImJ_T0093634.1 MGP_129S1SvImJ_G0035130.1 mouse_genomes_project 9 93600604 93672000 + MGP_129S1SvImJ_P0093634 Plod2 protein_coding protein_coding MGP_129S1SvImJ_T0093635.1 MGP_129S1SvImJ_G0035130.1 mouse_genomes_project 9 93635023 93655264 + Plod2 protein_coding retained_intron MGP_129S1SvImJ_T0093636.1 MGP_129S1SvImJ_G0035130.1 mouse_genomes_project 9 93658924 93664646 + Plod2 protein_coding retained_intron MGP_129S1SvImJ_T0093637.1 MGP_129S1SvImJ_G0035130.1 mouse_genomes_project 9 93664921 93666197 + Plod2 protein_coding retained_intron MGP_129S1SvImJ_T0011065.1 MGP_129S1SvImJ_G0009181.1 mouse_genomes_project 9 17134768 17134835 + Gm26231 miRNA miRNA MGP_129S1SvImJ_T0092220.1 MGP_129S1SvImJ_G0034759.1 mouse_genomes_project 9 47196989 47208937 + MGP_129S1SvImJ_P0092220 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0011072.1 MGP_129S1SvImJ_G0009188.1 mouse_genomes_project 9 19404177 19404247 - Mir7084 miRNA miRNA MGP_129S1SvImJ_T0005552.1 MGP_129S1SvImJ_G0004686.1 mouse_genomes_project 9 109310142 109311235 - Gm17118 antisense antisense MGP_129S1SvImJ_T0094131.1 MGP_129S1SvImJ_G0035232.1 mouse_genomes_project 9 108263882 108273775 + MGP_129S1SvImJ_P0094131 Pcbp4 protein_coding protein_coding MGP_129S1SvImJ_T0094132.1 MGP_129S1SvImJ_G0035232.1 mouse_genomes_project 9 108263889 108271730 + MGP_129S1SvImJ_P0094132 Pcbp4 protein_coding protein_coding MGP_129S1SvImJ_T0094133.1 MGP_129S1SvImJ_G0035232.1 mouse_genomes_project 9 108265642 108266398 + Pcbp4 protein_coding processed_transcript MGP_129S1SvImJ_T0094134.1 MGP_129S1SvImJ_G0035232.1 mouse_genomes_project 9 108266055 108271035 + MGP_129S1SvImJ_P0094134 Pcbp4 protein_coding protein_coding MGP_129S1SvImJ_T0094135.1 MGP_129S1SvImJ_G0035232.1 mouse_genomes_project 9 108270354 108270825 + Pcbp4 protein_coding retained_intron MGP_129S1SvImJ_T0094136.1 MGP_129S1SvImJ_G0035232.1 mouse_genomes_project 9 108270616 108271293 + MGP_129S1SvImJ_P0094136 Pcbp4 protein_coding protein_coding MGP_129S1SvImJ_T0094137.1 MGP_129S1SvImJ_G0035232.1 mouse_genomes_project 9 108271012 108273312 + MGP_129S1SvImJ_P0094137 Pcbp4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094138.1 MGP_129S1SvImJ_G0035232.1 mouse_genomes_project 9 108271228 108271967 + Pcbp4 protein_coding retained_intron MGP_129S1SvImJ_T0094139.1 MGP_129S1SvImJ_G0035232.1 mouse_genomes_project 9 108271253 108272746 + MGP_129S1SvImJ_P0094139 Pcbp4 protein_coding protein_coding MGP_129S1SvImJ_T0094140.1 MGP_129S1SvImJ_G0035232.1 mouse_genomes_project 9 108271548 108272217 + Pcbp4 protein_coding processed_transcript MGP_129S1SvImJ_T0094141.1 MGP_129S1SvImJ_G0035232.1 mouse_genomes_project 9 108271675 108273458 + MGP_129S1SvImJ_P0094141 Pcbp4 protein_coding protein_coding MGP_129S1SvImJ_T0094142.1 MGP_129S1SvImJ_G0035232.1 mouse_genomes_project 9 108271858 108272477 + Pcbp4 protein_coding retained_intron MGP_129S1SvImJ_T0016172.1 MGP_129S1SvImJ_G0014261.1 mouse_genomes_project 9 120047268 120049490 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0093562.1 MGP_129S1SvImJ_G0035115.1 mouse_genomes_project 9 90510744 90546587 - MGP_129S1SvImJ_P0093562 AF529169 protein_coding protein_coding MGP_129S1SvImJ_T0093563.1 MGP_129S1SvImJ_G0035115.1 mouse_genomes_project 9 90514637 90526901 - MGP_129S1SvImJ_P0093563 AF529169 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094714.1 MGP_129S1SvImJ_G0035320.1 mouse_genomes_project 9 110939209 110988761 + MGP_129S1SvImJ_P0094714 Pfkfb4 protein_coding protein_coding MGP_129S1SvImJ_T0094715.1 MGP_129S1SvImJ_G0035320.1 mouse_genomes_project 9 110939333 110988761 + MGP_129S1SvImJ_P0094715 Pfkfb4 protein_coding protein_coding MGP_129S1SvImJ_T0094716.1 MGP_129S1SvImJ_G0035320.1 mouse_genomes_project 9 110939379 110946701 + Pfkfb4 protein_coding retained_intron MGP_129S1SvImJ_T0094717.1 MGP_129S1SvImJ_G0035320.1 mouse_genomes_project 9 110939423 110940333 + Pfkfb4 protein_coding retained_intron MGP_129S1SvImJ_T0094718.1 MGP_129S1SvImJ_G0035320.1 mouse_genomes_project 9 110939447 110987245 + Pfkfb4 protein_coding retained_intron MGP_129S1SvImJ_T0094719.1 MGP_129S1SvImJ_G0035320.1 mouse_genomes_project 9 110939447 110987245 + MGP_129S1SvImJ_P0094719 Pfkfb4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094720.1 MGP_129S1SvImJ_G0035320.1 mouse_genomes_project 9 110939447 110987245 + MGP_129S1SvImJ_P0094720 Pfkfb4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094721.1 MGP_129S1SvImJ_G0035320.1 mouse_genomes_project 9 110946319 110962095 + Pfkfb4 protein_coding processed_transcript MGP_129S1SvImJ_T0094722.1 MGP_129S1SvImJ_G0035320.1 mouse_genomes_project 9 110962624 110985428 + MGP_129S1SvImJ_P0094722 Pfkfb4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094723.1 MGP_129S1SvImJ_G0035320.1 mouse_genomes_project 9 110968859 110988730 + Pfkfb4 protein_coding processed_transcript MGP_129S1SvImJ_T0095173.1 MGP_129S1SvImJ_G0035417.1 mouse_genomes_project 9 122101824 122104901 + MGP_129S1SvImJ_P0095173 Acaa1a protein_coding protein_coding MGP_129S1SvImJ_T0095175.1 MGP_129S1SvImJ_G0035417.1 mouse_genomes_project 9 122103195 122109932 + MGP_129S1SvImJ_P0095175 Acaa1a protein_coding protein_coding MGP_129S1SvImJ_T0095176.1 MGP_129S1SvImJ_G0035417.1 mouse_genomes_project 9 122103442 122114870 + MGP_129S1SvImJ_P0095176 Acaa1a protein_coding protein_coding MGP_129S1SvImJ_T0095177.1 MGP_129S1SvImJ_G0035417.1 mouse_genomes_project 9 122103538 122114871 + MGP_129S1SvImJ_P0095177 Acaa1a protein_coding protein_coding MGP_129S1SvImJ_T0095178.1 MGP_129S1SvImJ_G0035417.1 mouse_genomes_project 9 122103562 122115474 + Acaa1a protein_coding retained_intron MGP_129S1SvImJ_T0095179.1 MGP_129S1SvImJ_G0035417.1 mouse_genomes_project 9 122103605 122106857 + Acaa1a protein_coding retained_intron MGP_129S1SvImJ_T0095180.1 MGP_129S1SvImJ_G0035417.1 mouse_genomes_project 9 122103663 122115209 + MGP_129S1SvImJ_P0095180 Acaa1a protein_coding protein_coding MGP_129S1SvImJ_T0095181.1 MGP_129S1SvImJ_G0035417.1 mouse_genomes_project 9 122104921 122114225 + MGP_129S1SvImJ_P0095181 Acaa1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095182.1 MGP_129S1SvImJ_G0035417.1 mouse_genomes_project 9 122108246 122110904 + Acaa1a protein_coding retained_intron MGP_129S1SvImJ_T0095183.1 MGP_129S1SvImJ_G0035417.1 mouse_genomes_project 9 122108628 122114732 + MGP_129S1SvImJ_P0095183 Acaa1a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0095184.1 MGP_129S1SvImJ_G0035417.1 mouse_genomes_project 9 122110653 122113735 + Acaa1a protein_coding retained_intron MGP_129S1SvImJ_T0016105.1 MGP_129S1SvImJ_G0014194.1 mouse_genomes_project 9 85842042 85842487 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091110.1 MGP_129S1SvImJ_G0034322.1 mouse_genomes_project 9 4330058 4344934 + MGP_129S1SvImJ_P0091110 Mmp1a protein_coding protein_coding MGP_129S1SvImJ_T0005430.1 MGP_129S1SvImJ_G0004604.1 mouse_genomes_project 9 4529656 4555881 - AV064505 antisense antisense MGP_129S1SvImJ_T0011085.1 MGP_129S1SvImJ_G0009201.1 mouse_genomes_project 9 47283255 47283342 - Gm23653 miRNA miRNA MGP_129S1SvImJ_T0011763.1 MGP_129S1SvImJ_G0009879.1 mouse_genomes_project 9 100019820 100019927 - Gm27919 misc_RNA misc_RNA MGP_129S1SvImJ_T0091069.1 MGP_129S1SvImJ_G0034308.1 mouse_genomes_project 9 1007093 1022752 - MGP_129S1SvImJ_P0091069 Aasdhppt protein_coding protein_coding MGP_129S1SvImJ_T0092615.1 MGP_129S1SvImJ_G0034890.1 mouse_genomes_project 9 57647705 57659941 - MGP_129S1SvImJ_P0092615 Tbc1d21 protein_coding protein_coding MGP_129S1SvImJ_T0093046.1 MGP_129S1SvImJ_G0035003.1 mouse_genomes_project 9 70763547 70765155 + MGP_129S1SvImJ_P0093046 Gm10642 protein_coding protein_coding MGP_129S1SvImJ_T0092098.1 MGP_129S1SvImJ_G0034723.1 mouse_genomes_project 9 43454115 43498116 - MGP_129S1SvImJ_P0092098 Ube4a protein_coding protein_coding MGP_129S1SvImJ_T0092099.1 MGP_129S1SvImJ_G0034723.1 mouse_genomes_project 9 43456832 43498156 - MGP_129S1SvImJ_P0092099 Ube4a protein_coding protein_coding MGP_129S1SvImJ_T0092100.1 MGP_129S1SvImJ_G0034723.1 mouse_genomes_project 9 43464748 43498075 - MGP_129S1SvImJ_P0092100 Ube4a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092101.1 MGP_129S1SvImJ_G0034723.1 mouse_genomes_project 9 43464849 43498081 - MGP_129S1SvImJ_P0092101 Ube4a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092102.1 MGP_129S1SvImJ_G0034723.1 mouse_genomes_project 9 43477635 43498113 - Ube4a protein_coding retained_intron MGP_129S1SvImJ_T0092103.1 MGP_129S1SvImJ_G0034723.1 mouse_genomes_project 9 43484544 43498110 - MGP_129S1SvImJ_P0092103 Ube4a protein_coding protein_coding MGP_129S1SvImJ_T0092104.1 MGP_129S1SvImJ_G0034723.1 mouse_genomes_project 9 43489195 43498092 - Ube4a protein_coding retained_intron MGP_129S1SvImJ_T0101430.1 MGP_129S1SvImJ_G0039497.1 mouse_genomes_project 9 12298140 12298277 + Gm25791 snoRNA snoRNA MGP_129S1SvImJ_T0091294.1 MGP_129S1SvImJ_G0034393.1 mouse_genomes_project 9 16475195 16476134 + MGP_129S1SvImJ_P0091294 Olfr849 protein_coding protein_coding MGP_129S1SvImJ_T0095061.1 MGP_129S1SvImJ_G0035379.1 mouse_genomes_project 9 116108473 116157645 + MGP_129S1SvImJ_P0095061 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0093639.1 MGP_129S1SvImJ_G0035132.1 mouse_genomes_project 9 95794703 96361147 + MGP_129S1SvImJ_P0093639 Slc9a9 protein_coding protein_coding MGP_129S1SvImJ_T0093640.1 MGP_129S1SvImJ_G0035132.1 mouse_genomes_project 9 95794726 95844227 + Slc9a9 protein_coding processed_transcript MGP_129S1SvImJ_T0093641.1 MGP_129S1SvImJ_G0035132.1 mouse_genomes_project 9 96058789 96361154 + MGP_129S1SvImJ_P0093641 Slc9a9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0093642.1 MGP_129S1SvImJ_G0035132.1 mouse_genomes_project 9 96248957 96251818 + Slc9a9 protein_coding retained_intron MGP_129S1SvImJ_T0091230.1 MGP_129S1SvImJ_G0034362.1 mouse_genomes_project 9 12238717 12259685 - MGP_129S1SvImJ_P0091230 Med17 protein_coding protein_coding MGP_129S1SvImJ_T0098671.1 MGP_129S1SvImJ_G0036756.1 mouse_genomes_project 9 104112419 104112531 + Gm25669 rRNA rRNA MGP_129S1SvImJ_T0093834.1 MGP_129S1SvImJ_G0035176.1 mouse_genomes_project 9 101893488 101927838 - MGP_129S1SvImJ_P0093834 Il20rb protein_coding protein_coding MGP_129S1SvImJ_T0093835.1 MGP_129S1SvImJ_G0035176.1 mouse_genomes_project 9 101893490 101904877 - Il20rb protein_coding retained_intron MGP_129S1SvImJ_T0093836.1 MGP_129S1SvImJ_G0035176.1 mouse_genomes_project 9 101893573 101897533 - Il20rb protein_coding processed_transcript MGP_129S1SvImJ_T0093837.1 MGP_129S1SvImJ_G0035176.1 mouse_genomes_project 9 101894299 101897505 - Il20rb protein_coding retained_intron MGP_129S1SvImJ_T0093838.1 MGP_129S1SvImJ_G0035176.1 mouse_genomes_project 9 101894846 101910979 - Il20rb protein_coding processed_transcript MGP_129S1SvImJ_T0093839.1 MGP_129S1SvImJ_G0035176.1 mouse_genomes_project 9 101903709 101927435 - Il20rb protein_coding retained_intron MGP_129S1SvImJ_T0092135.1 MGP_129S1SvImJ_G0034738.1 mouse_genomes_project 9 43962218 43969419 + MGP_129S1SvImJ_P0092135 Fxyd2 protein_coding protein_coding MGP_129S1SvImJ_T0092136.1 MGP_129S1SvImJ_G0034738.1 mouse_genomes_project 9 43965243 43969445 + MGP_129S1SvImJ_P0092136 Fxyd2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0016092.1 MGP_129S1SvImJ_G0014181.1 mouse_genomes_project 9 77992939 77994140 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009265.1 MGP_129S1SvImJ_G0007446.1 mouse_genomes_project 9 62367463 62370818 + Gm26609 lincRNA lincRNA MGP_129S1SvImJ_T0098661.1 MGP_129S1SvImJ_G0036746.1 mouse_genomes_project 9 34970416 34970525 + n-R5s82 rRNA rRNA MGP_129S1SvImJ_T0005523.1 MGP_129S1SvImJ_G0004663.1 mouse_genomes_project 9 97179964 97181436 - antisense antisense MGP_129S1SvImJ_T0016047.1 MGP_129S1SvImJ_G0014136.1 mouse_genomes_project 9 35706487 35706983 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091155.1 MGP_129S1SvImJ_G0034339.1 mouse_genomes_project 9 6544247 7823913 - MGP_129S1SvImJ_P0091155 Cntn5 protein_coding protein_coding MGP_129S1SvImJ_T0091156.1 MGP_129S1SvImJ_G0034339.1 mouse_genomes_project 9 6544325 7823962 - MGP_129S1SvImJ_P0091156 Cntn5 protein_coding protein_coding MGP_129S1SvImJ_T0091157.1 MGP_129S1SvImJ_G0034339.1 mouse_genomes_project 9 6544719 7321323 - MGP_129S1SvImJ_P0091157 Cntn5 protein_coding protein_coding MGP_129S1SvImJ_T0091158.1 MGP_129S1SvImJ_G0034339.1 mouse_genomes_project 9 6544719 7321323 - MGP_129S1SvImJ_P0091158 Cntn5 protein_coding protein_coding MGP_129S1SvImJ_T0091159.1 MGP_129S1SvImJ_G0034339.1 mouse_genomes_project 9 7543150 7823636 - Cntn5 protein_coding retained_intron MGP_129S1SvImJ_T0095075.1 MGP_129S1SvImJ_G0035384.1 mouse_genomes_project 9 116521346 116562874 + MGP_129S1SvImJ_P0095075 4921528I07Rik protein_coding protein_coding MGP_129S1SvImJ_T0016174.1 MGP_129S1SvImJ_G0014263.1 mouse_genomes_project 9 123231919 123232346 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095325.1 MGP_129S1SvImJ_G0035464.1 mouse_genomes_project 9 125853498 125864346 - MGP_129S1SvImJ_P0095325 Zfp445 protein_coding protein_coding MGP_129S1SvImJ_T0002411.1 MGP_129S1SvImJ_G0002321.1 mouse_genomes_project 9 76411911 76415382 + TEC TEC MGP_129S1SvImJ_T0016057.1 MGP_129S1SvImJ_G0014146.1 mouse_genomes_project 9 57999960 58000128 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091832.1 MGP_129S1SvImJ_G0034605.1 mouse_genomes_project 9 36603943 36606617 + MGP_129S1SvImJ_P0091832 protein_coding protein_coding MGP_129S1SvImJ_T0093019.1 MGP_129S1SvImJ_G0034995.1 mouse_genomes_project 9 70045142 70055460 + MGP_129S1SvImJ_P0093019 Gtf2a2 protein_coding protein_coding MGP_129S1SvImJ_T0093020.1 MGP_129S1SvImJ_G0034995.1 mouse_genomes_project 9 70045146 70055332 + Gtf2a2 protein_coding retained_intron MGP_129S1SvImJ_T0093021.1 MGP_129S1SvImJ_G0034995.1 mouse_genomes_project 9 70045157 70055331 + MGP_129S1SvImJ_P0093021 Gtf2a2 protein_coding protein_coding MGP_129S1SvImJ_T0093022.1 MGP_129S1SvImJ_G0034995.1 mouse_genomes_project 9 70045158 70055332 + MGP_129S1SvImJ_P0093022 Gtf2a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093023.1 MGP_129S1SvImJ_G0034995.1 mouse_genomes_project 9 70045160 70055109 + Gtf2a2 protein_coding processed_transcript MGP_129S1SvImJ_T0093024.1 MGP_129S1SvImJ_G0034995.1 mouse_genomes_project 9 70045163 70050815 + Gtf2a2 protein_coding retained_intron MGP_129S1SvImJ_T0093025.1 MGP_129S1SvImJ_G0034995.1 mouse_genomes_project 9 70045163 70055331 + MGP_129S1SvImJ_P0093025 Gtf2a2 protein_coding protein_coding MGP_129S1SvImJ_T0093026.1 MGP_129S1SvImJ_G0034995.1 mouse_genomes_project 9 70045166 70052068 + MGP_129S1SvImJ_P0093026 Gtf2a2 protein_coding protein_coding MGP_129S1SvImJ_T0093027.1 MGP_129S1SvImJ_G0034995.1 mouse_genomes_project 9 70045171 70052063 + Gtf2a2 protein_coding retained_intron MGP_129S1SvImJ_T0093028.1 MGP_129S1SvImJ_G0034995.1 mouse_genomes_project 9 70045176 70048231 + Gtf2a2 protein_coding retained_intron MGP_129S1SvImJ_T0093029.1 MGP_129S1SvImJ_G0034995.1 mouse_genomes_project 9 70045187 70052080 + MGP_129S1SvImJ_P0093029 Gtf2a2 protein_coding protein_coding MGP_129S1SvImJ_T0093030.1 MGP_129S1SvImJ_G0034995.1 mouse_genomes_project 9 70045235 70055332 + MGP_129S1SvImJ_P0093030 Gtf2a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093031.1 MGP_129S1SvImJ_G0034995.1 mouse_genomes_project 9 70048404 70055331 + Gtf2a2 protein_coding processed_transcript MGP_129S1SvImJ_T0093032.1 MGP_129S1SvImJ_G0034995.1 mouse_genomes_project 9 70049411 70052504 + Gtf2a2 protein_coding retained_intron MGP_129S1SvImJ_T0093033.1 MGP_129S1SvImJ_G0034995.1 mouse_genomes_project 9 70051641 70055331 + Gtf2a2 protein_coding retained_intron MGP_129S1SvImJ_T0011071.1 MGP_129S1SvImJ_G0009187.1 mouse_genomes_project 9 19074947 19075007 - Mir7083 miRNA miRNA MGP_129S1SvImJ_T0095270.1 MGP_129S1SvImJ_G0035447.1 mouse_genomes_project 9 124671071 124697113 + MGP_129S1SvImJ_P0095270 Nktr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095271.1 MGP_129S1SvImJ_G0035447.1 mouse_genomes_project 9 124671078 124711238 + MGP_129S1SvImJ_P0095271 Nktr protein_coding protein_coding MGP_129S1SvImJ_T0095272.1 MGP_129S1SvImJ_G0035447.1 mouse_genomes_project 9 124671080 124697031 + MGP_129S1SvImJ_P0095272 Nktr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095273.1 MGP_129S1SvImJ_G0035447.1 mouse_genomes_project 9 124671117 124695547 + MGP_129S1SvImJ_P0095273 Nktr protein_coding protein_coding MGP_129S1SvImJ_T0095274.1 MGP_129S1SvImJ_G0035447.1 mouse_genomes_project 9 124671119 124683382 + Nktr protein_coding retained_intron MGP_129S1SvImJ_T0095275.1 MGP_129S1SvImJ_G0035447.1 mouse_genomes_project 9 124671145 124689930 + Nktr protein_coding retained_intron MGP_129S1SvImJ_T0095276.1 MGP_129S1SvImJ_G0035447.1 mouse_genomes_project 9 124671171 124683397 + MGP_129S1SvImJ_P0095276 Nktr protein_coding unknown_likely_coding MGP_129S1SvImJ_T0095277.1 MGP_129S1SvImJ_G0035447.1 mouse_genomes_project 9 124671200 124673360 + Nktr protein_coding processed_transcript MGP_129S1SvImJ_T0095278.1 MGP_129S1SvImJ_G0035447.1 mouse_genomes_project 9 124671234 124702588 + MGP_129S1SvImJ_P0095278 Nktr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095279.1 MGP_129S1SvImJ_G0035447.1 mouse_genomes_project 9 124671268 124704235 + MGP_129S1SvImJ_P0095279 Nktr protein_coding protein_coding MGP_129S1SvImJ_T0095280.1 MGP_129S1SvImJ_G0035447.1 mouse_genomes_project 9 124671642 124684884 + MGP_129S1SvImJ_P0095280 Nktr protein_coding protein_coding MGP_129S1SvImJ_T0095281.1 MGP_129S1SvImJ_G0035447.1 mouse_genomes_project 9 124682766 124684952 + Nktr protein_coding retained_intron MGP_129S1SvImJ_T0095282.1 MGP_129S1SvImJ_G0035447.1 mouse_genomes_project 9 124684515 124697067 + Nktr protein_coding retained_intron MGP_129S1SvImJ_T0095283.1 MGP_129S1SvImJ_G0035447.1 mouse_genomes_project 9 124705180 124708791 + MGP_129S1SvImJ_P0095283 Nktr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095284.1 MGP_129S1SvImJ_G0035447.1 mouse_genomes_project 9 124705609 124707042 + Nktr protein_coding retained_intron MGP_129S1SvImJ_T0095285.1 MGP_129S1SvImJ_G0035447.1 mouse_genomes_project 9 124706061 124709252 + MGP_129S1SvImJ_P0095285 Nktr protein_coding protein_coding MGP_129S1SvImJ_T0095286.1 MGP_129S1SvImJ_G0035447.1 mouse_genomes_project 9 124706921 124708751 + Nktr protein_coding retained_intron MGP_129S1SvImJ_T0093044.1 MGP_129S1SvImJ_G0035001.1 mouse_genomes_project 9 70641161 70694570 + MGP_129S1SvImJ_P0093044 Sltm protein_coding protein_coding MGP_129S1SvImJ_T0100165.1 MGP_129S1SvImJ_G0038232.1 mouse_genomes_project 9 35845391 35845590 - Gm24764 snRNA snRNA MGP_129S1SvImJ_T0099018.1 MGP_129S1SvImJ_G0037090.1 mouse_genomes_project 9 27167185 27169212 - Gm15521 sense_intronic sense_intronic MGP_129S1SvImJ_T0091713.1 MGP_129S1SvImJ_G0034551.1 mouse_genomes_project 9 34492243 34493601 - MGP_129S1SvImJ_P0091713 Gm17689 protein_coding protein_coding MGP_129S1SvImJ_T0091304.1 MGP_129S1SvImJ_G0034403.1 mouse_genomes_project 9 16989568 16990866 - MGP_129S1SvImJ_P0091304 protein_coding protein_coding MGP_129S1SvImJ_T0092539.1 MGP_129S1SvImJ_G0034866.1 mouse_genomes_project 9 56716341 56717689 + MGP_129S1SvImJ_P0092539 Rpp25 protein_coding protein_coding MGP_129S1SvImJ_T0091896.1 MGP_129S1SvImJ_G0034657.1 mouse_genomes_project 9 38173761 38174694 - MGP_129S1SvImJ_P0091896 Olfr980 protein_coding protein_coding MGP_129S1SvImJ_T0016070.1 MGP_129S1SvImJ_G0014159.1 mouse_genomes_project 9 72269919 72270724 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0093255.1 MGP_129S1SvImJ_G0035046.1 mouse_genomes_project 9 76359784 76489659 + MGP_129S1SvImJ_P0093255 Hmgcll1 protein_coding protein_coding MGP_129S1SvImJ_T0093256.1 MGP_129S1SvImJ_G0035046.1 mouse_genomes_project 9 76359784 76489659 + MGP_129S1SvImJ_P0093256 Hmgcll1 protein_coding protein_coding MGP_129S1SvImJ_T0093257.1 MGP_129S1SvImJ_G0035046.1 mouse_genomes_project 9 76359913 76487497 + MGP_129S1SvImJ_P0093257 Hmgcll1 protein_coding protein_coding MGP_129S1SvImJ_T0093258.1 MGP_129S1SvImJ_G0035046.1 mouse_genomes_project 9 76359940 76401371 + Hmgcll1 protein_coding retained_intron MGP_129S1SvImJ_T0093259.1 MGP_129S1SvImJ_G0035046.1 mouse_genomes_project 9 76359940 76420557 + Hmgcll1 protein_coding retained_intron MGP_129S1SvImJ_T0093260.1 MGP_129S1SvImJ_G0035046.1 mouse_genomes_project 9 76359940 76417258 + Hmgcll1 protein_coding retained_intron MGP_129S1SvImJ_T0093261.1 MGP_129S1SvImJ_G0035046.1 mouse_genomes_project 9 76359973 76487408 + MGP_129S1SvImJ_P0093261 Hmgcll1 protein_coding protein_coding MGP_129S1SvImJ_T0011082.1 MGP_129S1SvImJ_G0009198.1 mouse_genomes_project 9 42885920 42885986 + Mir7085 miRNA miRNA MGP_129S1SvImJ_T0092508.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56299749 56303137 + MGP_129S1SvImJ_P0092508 Man2c1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092509.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56299749 56311712 + MGP_129S1SvImJ_P0092509 Man2c1 protein_coding protein_coding MGP_129S1SvImJ_T0092510.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56299827 56305778 + MGP_129S1SvImJ_P0092510 Man2c1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092511.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56299827 56309700 + MGP_129S1SvImJ_P0092511 Man2c1 protein_coding protein_coding MGP_129S1SvImJ_T0092512.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56299829 56304113 + Man2c1 protein_coding retained_intron MGP_129S1SvImJ_T0092513.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56299829 56311193 + MGP_129S1SvImJ_P0092513 Man2c1 protein_coding protein_coding MGP_129S1SvImJ_T0092514.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56299836 56300313 + Man2c1 protein_coding processed_transcript MGP_129S1SvImJ_T0092515.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56299845 56306792 + MGP_129S1SvImJ_P0092515 Man2c1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092516.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56299845 56311194 + MGP_129S1SvImJ_P0092516 Man2c1 protein_coding protein_coding MGP_129S1SvImJ_T0092517.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56299845 56308387 + MGP_129S1SvImJ_P0092517 Man2c1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092518.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56300433 56304087 + Man2c1 protein_coding retained_intron MGP_129S1SvImJ_T0092519.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56303924 56306512 + Man2c1 protein_coding retained_intron MGP_129S1SvImJ_T0092520.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56304573 56305985 + MGP_129S1SvImJ_P0092520 Man2c1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092521.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56305726 56306826 + Man2c1 protein_coding retained_intron MGP_129S1SvImJ_T0092522.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56307031 56309718 + MGP_129S1SvImJ_P0092522 Man2c1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092523.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56307414 56309401 + MGP_129S1SvImJ_P0092523 Man2c1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092524.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56307856 56308983 + Man2c1 protein_coding retained_intron MGP_129S1SvImJ_T0092525.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56308488 56311203 + Man2c1 protein_coding retained_intron MGP_129S1SvImJ_T0092526.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56308488 56309702 + Man2c1 protein_coding retained_intron MGP_129S1SvImJ_T0092527.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56308866 56310169 + Man2c1 protein_coding retained_intron MGP_129S1SvImJ_T0092528.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56309267 56311197 + Man2c1 protein_coding retained_intron MGP_129S1SvImJ_T0092529.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56309672 56311203 + Man2c1 protein_coding retained_intron MGP_129S1SvImJ_T0092530.1 MGP_129S1SvImJ_G0034859.1 mouse_genomes_project 9 56310367 56311197 + Man2c1 protein_coding retained_intron MGP_129S1SvImJ_T0098408.1 MGP_129S1SvImJ_G0036493.1 mouse_genomes_project 9 42858466 42859252 - pseudogene pseudogene MGP_129S1SvImJ_T0095351.1 MGP_129S1SvImJ_G0035473.1 mouse_genomes_project 9 126172727 126183553 + MGP_129S1SvImJ_P0095351 Clec3b protein_coding protein_coding MGP_129S1SvImJ_T0099020.1 MGP_129S1SvImJ_G0037092.1 mouse_genomes_project 9 55380043 55381518 - Gm29322 sense_intronic sense_intronic MGP_129S1SvImJ_T0005534.1 MGP_129S1SvImJ_G0004672.1 mouse_genomes_project 9 101094934 101138948 + Gm16004 antisense antisense MGP_129S1SvImJ_T0018535.1 MGP_129S1SvImJ_G0015732.1 mouse_genomes_project 9 32917353 32932527 + 4930581F22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018536.1 MGP_129S1SvImJ_G0015732.1 mouse_genomes_project 9 32917392 32919876 + 4930581F22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018537.1 MGP_129S1SvImJ_G0015732.1 mouse_genomes_project 9 32919020 32925246 + 4930581F22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018538.1 MGP_129S1SvImJ_G0015732.1 mouse_genomes_project 9 32919587 32927996 + 4930581F22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018539.1 MGP_129S1SvImJ_G0015732.1 mouse_genomes_project 9 32919671 32925674 + 4930581F22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018540.1 MGP_129S1SvImJ_G0015732.1 mouse_genomes_project 9 32919801 32928503 + 4930581F22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0093503.1 MGP_129S1SvImJ_G0035099.1 mouse_genomes_project 9 87596058 87611098 + MGP_129S1SvImJ_P0093503 Prss35 protein_coding protein_coding MGP_129S1SvImJ_T0093504.1 MGP_129S1SvImJ_G0035099.1 mouse_genomes_project 9 87596058 87611269 + MGP_129S1SvImJ_P0093504 Prss35 protein_coding protein_coding MGP_129S1SvImJ_T0091225.1 MGP_129S1SvImJ_G0034359.1 mouse_genomes_project 9 11967631 12010611 - MGP_129S1SvImJ_P0091225 Panx1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091226.1 MGP_129S1SvImJ_G0034359.1 mouse_genomes_project 9 11967984 12010170 - MGP_129S1SvImJ_P0091226 Panx1 protein_coding protein_coding MGP_129S1SvImJ_T0091227.1 MGP_129S1SvImJ_G0034359.1 mouse_genomes_project 9 11969764 11972354 - Panx1 protein_coding retained_intron MGP_129S1SvImJ_T0016048.1 MGP_129S1SvImJ_G0014137.1 mouse_genomes_project 9 36232931 36233966 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0094553.1 MGP_129S1SvImJ_G0035299.1 mouse_genomes_project 9 110419175 110424590 + MGP_129S1SvImJ_P0094553 Ccdc71 protein_coding protein_coding MGP_129S1SvImJ_T0094554.1 MGP_129S1SvImJ_G0035299.1 mouse_genomes_project 9 110419183 110421917 + MGP_129S1SvImJ_P0094554 Ccdc71 protein_coding protein_coding MGP_129S1SvImJ_T0094555.1 MGP_129S1SvImJ_G0035299.1 mouse_genomes_project 9 110420068 110424458 + MGP_129S1SvImJ_P0094555 Ccdc71 protein_coding protein_coding MGP_129S1SvImJ_T0005489.1 MGP_129S1SvImJ_G0004642.1 mouse_genomes_project 9 69471948 69474518 - Gm16144 antisense antisense MGP_129S1SvImJ_T0091274.1 MGP_129S1SvImJ_G0034376.1 mouse_genomes_project 9 15485963 15508455 - MGP_129S1SvImJ_P0091274 Zfp558 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091275.1 MGP_129S1SvImJ_G0034376.1 mouse_genomes_project 9 15486580 15503731 - MGP_129S1SvImJ_P0091275 Zfp558 protein_coding protein_coding MGP_129S1SvImJ_T0091276.1 MGP_129S1SvImJ_G0034376.1 mouse_genomes_project 9 15490045 15508460 - Zfp558 protein_coding processed_transcript MGP_129S1SvImJ_T0091277.1 MGP_129S1SvImJ_G0034376.1 mouse_genomes_project 9 15503061 15503594 - Zfp558 protein_coding processed_transcript MGP_129S1SvImJ_T0005454.1 MGP_129S1SvImJ_G0004621.1 mouse_genomes_project 9 43720051 43722215 + Gm17099 antisense antisense MGP_129S1SvImJ_T0009348.1 MGP_129S1SvImJ_G0007511.1 mouse_genomes_project 9 112821478 112822255 + Gm42470 lincRNA lincRNA MGP_129S1SvImJ_T0091111.1 MGP_129S1SvImJ_G0034323.1 mouse_genomes_project 9 4364789 4374650 + MGP_129S1SvImJ_P0091111 Mmp10 protein_coding protein_coding MGP_129S1SvImJ_T0009256.1 MGP_129S1SvImJ_G0007439.1 mouse_genomes_project 9 56744982 56751301 - Gm26631 lincRNA lincRNA MGP_129S1SvImJ_T0091505.1 MGP_129S1SvImJ_G0034485.1 mouse_genomes_project 9 19634789 19696666 - MGP_129S1SvImJ_P0091505 Anln protein_coding protein_coding MGP_129S1SvImJ_T0093066.1 MGP_129S1SvImJ_G0035008.1 mouse_genomes_project 9 71597090 71604424 - MGP_129S1SvImJ_P0093066 Polr2m protein_coding protein_coding MGP_129S1SvImJ_T0093071.1 MGP_129S1SvImJ_G0035008.1 mouse_genomes_project 9 71600099 71604538 - MGP_129S1SvImJ_P0093071 Polr2m protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093104.1 MGP_129S1SvImJ_G0035013.1 mouse_genomes_project 9 72425873 72493801 + MGP_129S1SvImJ_P0093104 Zfp280d protein_coding protein_coding MGP_129S1SvImJ_T0093105.1 MGP_129S1SvImJ_G0035013.1 mouse_genomes_project 9 72425900 72516179 + MGP_129S1SvImJ_P0093105 Zfp280d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093106.1 MGP_129S1SvImJ_G0035013.1 mouse_genomes_project 9 72425901 72517266 + MGP_129S1SvImJ_P0093106 Zfp280d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093107.1 MGP_129S1SvImJ_G0035013.1 mouse_genomes_project 9 72425909 72441481 + Zfp280d protein_coding processed_transcript MGP_129S1SvImJ_T0093108.1 MGP_129S1SvImJ_G0035013.1 mouse_genomes_project 9 72425973 72440169 + Zfp280d protein_coding processed_transcript MGP_129S1SvImJ_T0093109.1 MGP_129S1SvImJ_G0035013.1 mouse_genomes_project 9 72425975 72451603 + Zfp280d protein_coding retained_intron MGP_129S1SvImJ_T0093110.1 MGP_129S1SvImJ_G0035013.1 mouse_genomes_project 9 72447716 72517285 + MGP_129S1SvImJ_P0093110 Zfp280d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093111.1 MGP_129S1SvImJ_G0035013.1 mouse_genomes_project 9 72447748 72517401 + MGP_129S1SvImJ_P0093111 Zfp280d protein_coding protein_coding MGP_129S1SvImJ_T0093112.1 MGP_129S1SvImJ_G0035013.1 mouse_genomes_project 9 72451154 72475467 + MGP_129S1SvImJ_P0093112 Zfp280d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093113.1 MGP_129S1SvImJ_G0035013.1 mouse_genomes_project 9 72459568 72461675 + Zfp280d protein_coding retained_intron MGP_129S1SvImJ_T0093114.1 MGP_129S1SvImJ_G0035013.1 mouse_genomes_project 9 72464522 72466099 + Zfp280d protein_coding processed_transcript MGP_129S1SvImJ_T0093115.1 MGP_129S1SvImJ_G0035013.1 mouse_genomes_project 9 72464562 72476526 + MGP_129S1SvImJ_P0093115 Zfp280d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093116.1 MGP_129S1SvImJ_G0035013.1 mouse_genomes_project 9 72465083 72472174 + Zfp280d protein_coding retained_intron MGP_129S1SvImJ_T0093117.1 MGP_129S1SvImJ_G0035013.1 mouse_genomes_project 9 72475473 72481949 + Zfp280d protein_coding retained_intron MGP_129S1SvImJ_T0093118.1 MGP_129S1SvImJ_G0035013.1 mouse_genomes_project 9 72480889 72482977 + Zfp280d protein_coding retained_intron MGP_129S1SvImJ_T0093119.1 MGP_129S1SvImJ_G0035013.1 mouse_genomes_project 9 72483721 72487225 + Zfp280d protein_coding retained_intron MGP_129S1SvImJ_T0093120.1 MGP_129S1SvImJ_G0035013.1 mouse_genomes_project 9 72483767 72515715 + MGP_129S1SvImJ_P0093120 Zfp280d protein_coding protein_coding MGP_129S1SvImJ_T0093121.1 MGP_129S1SvImJ_G0035013.1 mouse_genomes_project 9 72491390 72516436 + MGP_129S1SvImJ_P0093121 Zfp280d protein_coding protein_coding MGP_129S1SvImJ_T0093122.1 MGP_129S1SvImJ_G0035013.1 mouse_genomes_project 9 72513961 72517396 + MGP_129S1SvImJ_P0093122 Zfp280d protein_coding protein_coding MGP_129S1SvImJ_T0092575.1 MGP_129S1SvImJ_G0034883.1 mouse_genomes_project 9 57294073 57385127 - MGP_129S1SvImJ_P0092575 Ccdc33 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0092576.1 MGP_129S1SvImJ_G0034883.1 mouse_genomes_project 9 57294080 57367639 - MGP_129S1SvImJ_P0092576 Ccdc33 protein_coding protein_coding MGP_129S1SvImJ_T0092577.1 MGP_129S1SvImJ_G0034883.1 mouse_genomes_project 9 57294081 57385206 - MGP_129S1SvImJ_P0092577 Ccdc33 protein_coding protein_coding MGP_129S1SvImJ_T0092578.1 MGP_129S1SvImJ_G0034883.1 mouse_genomes_project 9 57294085 57367567 - MGP_129S1SvImJ_P0092578 Ccdc33 protein_coding protein_coding MGP_129S1SvImJ_T0092579.1 MGP_129S1SvImJ_G0034883.1 mouse_genomes_project 9 57294122 57296380 - Ccdc33 protein_coding retained_intron MGP_129S1SvImJ_T0092580.1 MGP_129S1SvImJ_G0034883.1 mouse_genomes_project 9 57298635 57307424 - Ccdc33 protein_coding processed_transcript MGP_129S1SvImJ_T0092582.1 MGP_129S1SvImJ_G0034883.1 mouse_genomes_project 9 57332834 57380743 - Ccdc33 protein_coding processed_transcript MGP_129S1SvImJ_T0092583.1 MGP_129S1SvImJ_G0034883.1 mouse_genomes_project 9 57342350 57347407 - Ccdc33 protein_coding retained_intron MGP_129S1SvImJ_T0092586.1 MGP_129S1SvImJ_G0034883.1 mouse_genomes_project 9 57351663 57367639 - Ccdc33 protein_coding retained_intron MGP_129S1SvImJ_T0092587.1 MGP_129S1SvImJ_G0034883.1 mouse_genomes_project 9 57377129 57385190 - MGP_129S1SvImJ_P0092587 Ccdc33 protein_coding protein_coding MGP_129S1SvImJ_T0092960.1 MGP_129S1SvImJ_G0034985.1 mouse_genomes_project 9 66904154 66930898 - MGP_129S1SvImJ_P0092960 Tpm1 protein_coding protein_coding MGP_129S1SvImJ_T0092961.1 MGP_129S1SvImJ_G0034985.1 mouse_genomes_project 9 66904154 66930759 - MGP_129S1SvImJ_P0092961 Tpm1 protein_coding protein_coding MGP_129S1SvImJ_T0092962.1 MGP_129S1SvImJ_G0034985.1 mouse_genomes_project 9 66904154 66925399 - MGP_129S1SvImJ_P0092962 Tpm1 protein_coding protein_coding MGP_129S1SvImJ_T0092963.1 MGP_129S1SvImJ_G0034985.1 mouse_genomes_project 9 66904156 66925294 - MGP_129S1SvImJ_P0092963 Tpm1 protein_coding protein_coding MGP_129S1SvImJ_T0092964.1 MGP_129S1SvImJ_G0034985.1 mouse_genomes_project 9 66904157 66930701 - MGP_129S1SvImJ_P0092964 Tpm1 protein_coding protein_coding MGP_129S1SvImJ_T0092965.1 MGP_129S1SvImJ_G0034985.1 mouse_genomes_project 9 66904157 66925454 - MGP_129S1SvImJ_P0092965 Tpm1 protein_coding protein_coding MGP_129S1SvImJ_T0092966.1 MGP_129S1SvImJ_G0034985.1 mouse_genomes_project 9 66904170 66930693 - MGP_129S1SvImJ_P0092966 Tpm1 protein_coding protein_coding MGP_129S1SvImJ_T0092967.1 MGP_129S1SvImJ_G0034985.1 mouse_genomes_project 9 66904170 66930678 - MGP_129S1SvImJ_P0092967 Tpm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092968.1 MGP_129S1SvImJ_G0034985.1 mouse_genomes_project 9 66904179 66930767 - MGP_129S1SvImJ_P0092968 Tpm1 protein_coding protein_coding MGP_129S1SvImJ_T0092969.1 MGP_129S1SvImJ_G0034985.1 mouse_genomes_project 9 66904186 66925270 - MGP_129S1SvImJ_P0092969 Tpm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092970.1 MGP_129S1SvImJ_G0034985.1 mouse_genomes_project 9 66905886 66930664 - MGP_129S1SvImJ_P0092970 Tpm1 protein_coding protein_coding MGP_129S1SvImJ_T0092971.1 MGP_129S1SvImJ_G0034985.1 mouse_genomes_project 9 66905888 66925198 - MGP_129S1SvImJ_P0092971 Tpm1 protein_coding protein_coding MGP_129S1SvImJ_T0092972.1 MGP_129S1SvImJ_G0034985.1 mouse_genomes_project 9 66909448 66930705 - MGP_129S1SvImJ_P0092972 Tpm1 protein_coding protein_coding MGP_129S1SvImJ_T0092973.1 MGP_129S1SvImJ_G0034985.1 mouse_genomes_project 9 66909448 66930756 - MGP_129S1SvImJ_P0092973 Tpm1 protein_coding protein_coding MGP_129S1SvImJ_T0092974.1 MGP_129S1SvImJ_G0034985.1 mouse_genomes_project 9 66909522 66925333 - MGP_129S1SvImJ_P0092974 Tpm1 protein_coding protein_coding MGP_129S1SvImJ_T0092975.1 MGP_129S1SvImJ_G0034985.1 mouse_genomes_project 9 66909545 66930635 - MGP_129S1SvImJ_P0092975 Tpm1 protein_coding protein_coding MGP_129S1SvImJ_T0092976.1 MGP_129S1SvImJ_G0034985.1 mouse_genomes_project 9 66909604 66925222 - MGP_129S1SvImJ_P0092976 Tpm1 protein_coding protein_coding MGP_129S1SvImJ_T0092977.1 MGP_129S1SvImJ_G0034985.1 mouse_genomes_project 9 66910404 66930754 - MGP_129S1SvImJ_P0092977 Tpm1 protein_coding protein_coding MGP_129S1SvImJ_T0092978.1 MGP_129S1SvImJ_G0034985.1 mouse_genomes_project 9 66911476 66914318 - Tpm1 protein_coding processed_transcript MGP_129S1SvImJ_T0092979.1 MGP_129S1SvImJ_G0034985.1 mouse_genomes_project 9 66913712 66930610 - Tpm1 protein_coding retained_intron MGP_129S1SvImJ_T0092980.1 MGP_129S1SvImJ_G0034985.1 mouse_genomes_project 9 66915283 66930683 - Tpm1 protein_coding processed_transcript MGP_129S1SvImJ_T0005539.1 MGP_129S1SvImJ_G0004677.1 mouse_genomes_project 9 107204876 107214523 + Gm19667 antisense antisense MGP_129S1SvImJ_T0092229.1 MGP_129S1SvImJ_G0034764.1 mouse_genomes_project 9 47427260 47624895 - MGP_129S1SvImJ_P0092229 Zbtb16 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0092015.1 MGP_129S1SvImJ_G0034698.1 mouse_genomes_project 9 42749806 42755187 - Abcg4 protein_coding retained_intron MGP_129S1SvImJ_T0092016.1 MGP_129S1SvImJ_G0034698.1 mouse_genomes_project 9 42749806 42763925 - MGP_129S1SvImJ_P0092016 Abcg4 protein_coding protein_coding MGP_129S1SvImJ_T0092017.1 MGP_129S1SvImJ_G0034698.1 mouse_genomes_project 9 42749808 42764995 - MGP_129S1SvImJ_P0092017 Abcg4 protein_coding protein_coding MGP_129S1SvImJ_T0092018.1 MGP_129S1SvImJ_G0034698.1 mouse_genomes_project 9 42751070 42756411 - Abcg4 protein_coding retained_intron MGP_129S1SvImJ_T0092019.1 MGP_129S1SvImJ_G0034698.1 mouse_genomes_project 9 42751713 42756173 - MGP_129S1SvImJ_P0092019 Abcg4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092020.1 MGP_129S1SvImJ_G0034698.1 mouse_genomes_project 9 42753660 42763917 - Abcg4 protein_coding processed_transcript MGP_129S1SvImJ_T0092021.1 MGP_129S1SvImJ_G0034698.1 mouse_genomes_project 9 42754081 42756364 - Abcg4 protein_coding retained_intron MGP_129S1SvImJ_T0092022.1 MGP_129S1SvImJ_G0034698.1 mouse_genomes_project 9 42757220 42758243 - Abcg4 protein_coding retained_intron MGP_129S1SvImJ_T0092023.1 MGP_129S1SvImJ_G0034698.1 mouse_genomes_project 9 42758430 42764735 - MGP_129S1SvImJ_P0092023 Abcg4 protein_coding protein_coding MGP_129S1SvImJ_T0092024.1 MGP_129S1SvImJ_G0034698.1 mouse_genomes_project 9 42758493 42764516 - MGP_129S1SvImJ_P0092024 Abcg4 protein_coding protein_coding MGP_129S1SvImJ_T0101504.1 MGP_129S1SvImJ_G0039571.1 mouse_genomes_project 9 126188320 126188453 + Gm23323 snoRNA snoRNA MGP_129S1SvImJ_T0011080.1 MGP_129S1SvImJ_G0009196.1 mouse_genomes_project 9 40788766 40788835 + Gm44311 miRNA miRNA MGP_129S1SvImJ_T0092549.1 MGP_129S1SvImJ_G0034872.1 mouse_genomes_project 9 56820000 56826277 - MGP_129S1SvImJ_P0092549 Cplx3 protein_coding protein_coding MGP_129S1SvImJ_T0101472.1 MGP_129S1SvImJ_G0039539.1 mouse_genomes_project 9 77114696 77114816 - Gm22938 snoRNA snoRNA MGP_129S1SvImJ_T0092493.1 MGP_129S1SvImJ_G0034852.1 mouse_genomes_project 9 56006910 56010258 - MGP_129S1SvImJ_P0092493 Odf3l1 protein_coding protein_coding MGP_129S1SvImJ_T0016027.1 MGP_129S1SvImJ_G0014116.1 mouse_genomes_project 9 17034464 17034801 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091892.1 MGP_129S1SvImJ_G0034653.1 mouse_genomes_project 9 38117860 38118793 - MGP_129S1SvImJ_P0091892 Olfr975 protein_coding protein_coding MGP_129S1SvImJ_T0092055.1 MGP_129S1SvImJ_G0034716.1 mouse_genomes_project 9 43210410 43252318 - MGP_129S1SvImJ_P0092055 Phldb1 protein_coding protein_coding MGP_129S1SvImJ_T0092056.1 MGP_129S1SvImJ_G0034716.1 mouse_genomes_project 9 43210414 43239856 - MGP_129S1SvImJ_P0092056 Phldb1 protein_coding protein_coding MGP_129S1SvImJ_T0092057.1 MGP_129S1SvImJ_G0034716.1 mouse_genomes_project 9 43210414 43259188 - MGP_129S1SvImJ_P0092057 Phldb1 protein_coding protein_coding MGP_129S1SvImJ_T0092058.1 MGP_129S1SvImJ_G0034716.1 mouse_genomes_project 9 43210414 43237477 - MGP_129S1SvImJ_P0092058 Phldb1 protein_coding protein_coding MGP_129S1SvImJ_T0092059.1 MGP_129S1SvImJ_G0034716.1 mouse_genomes_project 9 43210414 43237502 - MGP_129S1SvImJ_P0092059 Phldb1 protein_coding protein_coding MGP_129S1SvImJ_T0092060.1 MGP_129S1SvImJ_G0034716.1 mouse_genomes_project 9 43210414 43252297 - MGP_129S1SvImJ_P0092060 Phldb1 protein_coding protein_coding MGP_129S1SvImJ_T0092061.1 MGP_129S1SvImJ_G0034716.1 mouse_genomes_project 9 43210416 43252318 - MGP_129S1SvImJ_P0092061 Phldb1 protein_coding protein_coding MGP_129S1SvImJ_T0092062.1 MGP_129S1SvImJ_G0034716.1 mouse_genomes_project 9 43210416 43240613 - MGP_129S1SvImJ_P0092062 Phldb1 protein_coding protein_coding MGP_129S1SvImJ_T0092063.1 MGP_129S1SvImJ_G0034716.1 mouse_genomes_project 9 43210416 43225937 - MGP_129S1SvImJ_P0092063 Phldb1 protein_coding protein_coding MGP_129S1SvImJ_T0092064.1 MGP_129S1SvImJ_G0034716.1 mouse_genomes_project 9 43211741 43222034 - Phldb1 protein_coding retained_intron MGP_129S1SvImJ_T0092065.1 MGP_129S1SvImJ_G0034716.1 mouse_genomes_project 9 43218553 43220612 - Phldb1 protein_coding retained_intron MGP_129S1SvImJ_T0092066.1 MGP_129S1SvImJ_G0034716.1 mouse_genomes_project 9 43221922 43228313 - MGP_129S1SvImJ_P0092066 Phldb1 protein_coding protein_coding MGP_129S1SvImJ_T0092067.1 MGP_129S1SvImJ_G0034716.1 mouse_genomes_project 9 43225165 43235176 - MGP_129S1SvImJ_P0092067 Phldb1 protein_coding protein_coding MGP_129S1SvImJ_T0092068.1 MGP_129S1SvImJ_G0034716.1 mouse_genomes_project 9 43227775 43232650 - MGP_129S1SvImJ_P0092068 Phldb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092069.1 MGP_129S1SvImJ_G0034716.1 mouse_genomes_project 9 43240356 43245638 - MGP_129S1SvImJ_P0092069 Phldb1 protein_coding protein_coding MGP_129S1SvImJ_T0092070.1 MGP_129S1SvImJ_G0034716.1 mouse_genomes_project 9 43240526 43245601 - MGP_129S1SvImJ_P0092070 Phldb1 protein_coding protein_coding MGP_129S1SvImJ_T0092071.1 MGP_129S1SvImJ_G0034716.1 mouse_genomes_project 9 43242552 43251568 - Phldb1 protein_coding retained_intron MGP_129S1SvImJ_T0092072.1 MGP_129S1SvImJ_G0034716.1 mouse_genomes_project 9 43250227 43250703 - Phldb1 protein_coding processed_transcript MGP_129S1SvImJ_T0005461.1 MGP_129S1SvImJ_G0004626.1 mouse_genomes_project 9 50202169 50207879 + 2010007H06Rik antisense antisense MGP_129S1SvImJ_T0005462.1 MGP_129S1SvImJ_G0004626.1 mouse_genomes_project 9 50203951 50204579 + 2010007H06Rik antisense antisense MGP_129S1SvImJ_T0011759.1 MGP_129S1SvImJ_G0009875.1 mouse_genomes_project 9 77177393 77177686 - Gm23791 misc_RNA misc_RNA MGP_129S1SvImJ_T0016140.1 MGP_129S1SvImJ_G0014229.1 mouse_genomes_project 9 98468966 98470803 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0092197.1 MGP_129S1SvImJ_G0034753.1 mouse_genomes_project 9 44915353 44928073 + Bud13 protein_coding retained_intron MGP_129S1SvImJ_T0092198.1 MGP_129S1SvImJ_G0034753.1 mouse_genomes_project 9 44915353 44932753 + MGP_129S1SvImJ_P0092198 Bud13 protein_coding protein_coding MGP_129S1SvImJ_T0092199.1 MGP_129S1SvImJ_G0034753.1 mouse_genomes_project 9 44920930 44932753 + MGP_129S1SvImJ_P0092199 Bud13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092200.1 MGP_129S1SvImJ_G0034753.1 mouse_genomes_project 9 44920952 44924523 + Bud13 protein_coding retained_intron MGP_129S1SvImJ_T0091889.1 MGP_129S1SvImJ_G0034650.1 mouse_genomes_project 9 38045113 38045992 + MGP_129S1SvImJ_P0091889 Olfr972 protein_coding protein_coding MGP_129S1SvImJ_T0092041.1 MGP_129S1SvImJ_G0034707.1 mouse_genomes_project 9 42889201 42893833 - MGP_129S1SvImJ_P0092041 Trappc4 protein_coding protein_coding MGP_129S1SvImJ_T0002439.1 MGP_129S1SvImJ_G0002348.1 mouse_genomes_project 9 96518535 96519629 + TEC TEC MGP_129S1SvImJ_T0094459.1 MGP_129S1SvImJ_G0035282.1 mouse_genomes_project 9 109975438 109978991 + MGP_129S1SvImJ_P0094459 Gmppb protein_coding protein_coding MGP_129S1SvImJ_T0094460.1 MGP_129S1SvImJ_G0035282.1 mouse_genomes_project 9 109975465 109975778 + Gmppb protein_coding processed_transcript MGP_129S1SvImJ_T0094461.1 MGP_129S1SvImJ_G0035282.1 mouse_genomes_project 9 109975485 109978106 + Gmppb protein_coding retained_intron MGP_129S1SvImJ_T0094462.1 MGP_129S1SvImJ_G0035282.1 mouse_genomes_project 9 109975521 109977892 + MGP_129S1SvImJ_P0094462 Gmppb protein_coding protein_coding MGP_129S1SvImJ_T0094463.1 MGP_129S1SvImJ_G0035282.1 mouse_genomes_project 9 109975651 109977715 + Gmppb protein_coding retained_intron MGP_129S1SvImJ_T0092373.1 MGP_129S1SvImJ_G0034813.1 mouse_genomes_project 9 52607540 52643339 - MGP_129S1SvImJ_P0092373 Acat1 protein_coding protein_coding MGP_129S1SvImJ_T0092374.1 MGP_129S1SvImJ_G0034813.1 mouse_genomes_project 9 52609505 52610776 - Acat1 protein_coding processed_transcript MGP_129S1SvImJ_T0092375.1 MGP_129S1SvImJ_G0034813.1 mouse_genomes_project 9 52624731 52643287 - Acat1 protein_coding retained_intron MGP_129S1SvImJ_T0009226.1 MGP_129S1SvImJ_G0007415.1 mouse_genomes_project 9 30660114 30685451 - Gm27162 lincRNA lincRNA MGP_129S1SvImJ_T0011124.1 MGP_129S1SvImJ_G0009240.1 mouse_genomes_project 9 111994702 111994770 + Mir7089 miRNA miRNA MGP_129S1SvImJ_T0016160.1 MGP_129S1SvImJ_G0014249.1 mouse_genomes_project 9 107897677 107898275 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091989.1 MGP_129S1SvImJ_G0034692.1 mouse_genomes_project 9 42561179 42563122 + MGP_129S1SvImJ_P0091989 C1qtnf5 protein_coding protein_coding MGP_129S1SvImJ_T0091990.1 MGP_129S1SvImJ_G0034692.1 mouse_genomes_project 9 42561188 42563120 + MGP_129S1SvImJ_P0091990 C1qtnf5 protein_coding protein_coding MGP_129S1SvImJ_T0091991.1 MGP_129S1SvImJ_G0034692.1 mouse_genomes_project 9 42561208 42563119 + MGP_129S1SvImJ_P0091991 C1qtnf5 protein_coding protein_coding MGP_129S1SvImJ_T0091992.1 MGP_129S1SvImJ_G0034692.1 mouse_genomes_project 9 42561243 42562428 + MGP_129S1SvImJ_P0091992 C1qtnf5 protein_coding protein_coding MGP_129S1SvImJ_T0091993.1 MGP_129S1SvImJ_G0034692.1 mouse_genomes_project 9 42561248 42563119 + MGP_129S1SvImJ_P0091993 C1qtnf5 protein_coding protein_coding MGP_129S1SvImJ_T0091994.1 MGP_129S1SvImJ_G0034692.1 mouse_genomes_project 9 42561255 42561842 + MGP_129S1SvImJ_P0091994 C1qtnf5 protein_coding protein_coding MGP_129S1SvImJ_T0091995.1 MGP_129S1SvImJ_G0034692.1 mouse_genomes_project 9 42561309 42562707 + MGP_129S1SvImJ_P0091995 C1qtnf5 protein_coding protein_coding MGP_129S1SvImJ_T0091996.1 MGP_129S1SvImJ_G0034692.1 mouse_genomes_project 9 42561449 42562479 + MGP_129S1SvImJ_P0091996 C1qtnf5 protein_coding protein_coding MGP_129S1SvImJ_T0100204.1 MGP_129S1SvImJ_G0038271.1 mouse_genomes_project 9 91314382 91314559 + Gm22866 snRNA snRNA MGP_129S1SvImJ_T0093237.1 MGP_129S1SvImJ_G0035038.1 mouse_genomes_project 9 75673426 75696500 - Mapk6 protein_coding processed_transcript MGP_129S1SvImJ_T0093238.1 MGP_129S1SvImJ_G0035038.1 mouse_genomes_project 9 75693395 75718637 - MGP_129S1SvImJ_P0093238 Mapk6 protein_coding protein_coding MGP_129S1SvImJ_T0093239.1 MGP_129S1SvImJ_G0035038.1 mouse_genomes_project 9 75693397 75719283 - MGP_129S1SvImJ_P0093239 Mapk6 protein_coding protein_coding MGP_129S1SvImJ_T0093240.1 MGP_129S1SvImJ_G0035038.1 mouse_genomes_project 9 75700473 75705724 - Mapk6 protein_coding retained_intron MGP_129S1SvImJ_T0093241.1 MGP_129S1SvImJ_G0035038.1 mouse_genomes_project 9 75701118 75719274 - Mapk6 protein_coding retained_intron MGP_129S1SvImJ_T0093242.1 MGP_129S1SvImJ_G0035038.1 mouse_genomes_project 9 75706375 75718861 - Mapk6 protein_coding processed_transcript MGP_129S1SvImJ_T0093243.1 MGP_129S1SvImJ_G0035038.1 mouse_genomes_project 9 75706528 75719263 - Mapk6 protein_coding processed_transcript MGP_129S1SvImJ_T0091838.1 MGP_129S1SvImJ_G0034611.1 mouse_genomes_project 9 36759625 36760573 - MGP_129S1SvImJ_P0091838 Olfr919 protein_coding protein_coding MGP_129S1SvImJ_T0091813.1 MGP_129S1SvImJ_G0034586.1 mouse_genomes_project 9 36193766 36194711 + MGP_129S1SvImJ_P0091813 Olfr890 protein_coding protein_coding MGP_129S1SvImJ_T0009235.1 MGP_129S1SvImJ_G0007423.1 mouse_genomes_project 9 33982782 33984690 - lincRNA lincRNA MGP_129S1SvImJ_T0009236.1 MGP_129S1SvImJ_G0007423.1 mouse_genomes_project 9 33982823 33984742 - lincRNA lincRNA MGP_129S1SvImJ_T0092931.1 MGP_129S1SvImJ_G0034976.1 mouse_genomes_project 9 66354020 66360149 - MGP_129S1SvImJ_P0092931 Fbxl22 protein_coding protein_coding MGP_129S1SvImJ_T0091658.1 MGP_129S1SvImJ_G0034532.1 mouse_genomes_project 9 33008534 33015269 - MGP_129S1SvImJ_P0091658 Foxred1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091659.1 MGP_129S1SvImJ_G0034532.1 mouse_genomes_project 9 33008536 33015287 - Foxred1 protein_coding retained_intron MGP_129S1SvImJ_T0091660.1 MGP_129S1SvImJ_G0034532.1 mouse_genomes_project 9 33008536 33015303 - Foxred1 protein_coding retained_intron MGP_129S1SvImJ_T0091661.1 MGP_129S1SvImJ_G0034532.1 mouse_genomes_project 9 33008536 33015334 - MGP_129S1SvImJ_P0091661 Foxred1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091662.1 MGP_129S1SvImJ_G0034532.1 mouse_genomes_project 9 33008536 33015313 - MGP_129S1SvImJ_P0091662 Foxred1 protein_coding protein_coding MGP_129S1SvImJ_T0091663.1 MGP_129S1SvImJ_G0034532.1 mouse_genomes_project 9 33008536 33015388 - MGP_129S1SvImJ_P0091663 Foxred1 protein_coding protein_coding MGP_129S1SvImJ_T0091664.1 MGP_129S1SvImJ_G0034532.1 mouse_genomes_project 9 33009193 33010250 - Foxred1 protein_coding retained_intron MGP_129S1SvImJ_T0091665.1 MGP_129S1SvImJ_G0034532.1 mouse_genomes_project 9 33009512 33010562 - MGP_129S1SvImJ_P0091665 Foxred1 protein_coding protein_coding MGP_129S1SvImJ_T0091666.1 MGP_129S1SvImJ_G0034532.1 mouse_genomes_project 9 33010414 33015279 - Foxred1 protein_coding retained_intron MGP_129S1SvImJ_T0091667.1 MGP_129S1SvImJ_G0034532.1 mouse_genomes_project 9 33010550 33015329 - MGP_129S1SvImJ_P0091667 Foxred1 protein_coding protein_coding MGP_129S1SvImJ_T0091668.1 MGP_129S1SvImJ_G0034532.1 mouse_genomes_project 9 33011865 33015255 - MGP_129S1SvImJ_P0091668 Foxred1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091669.1 MGP_129S1SvImJ_G0034532.1 mouse_genomes_project 9 33011875 33015230 - MGP_129S1SvImJ_P0091669 Foxred1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095415.1 MGP_129S1SvImJ_G0035496.1 mouse_genomes_project 9 127686329 127691526 + MGP_129S1SvImJ_P0095415 Nlrp4g protein_coding protein_coding MGP_129S1SvImJ_T0002414.1 MGP_129S1SvImJ_G0002324.1 mouse_genomes_project 9 77786043 77786594 + TEC TEC MGP_129S1SvImJ_T0094984.1 MGP_129S1SvImJ_G0035370.1 mouse_genomes_project 9 113333046 113420210 + MGP_129S1SvImJ_P0094984 Lrrfip2 protein_coding protein_coding MGP_129S1SvImJ_T0094985.1 MGP_129S1SvImJ_G0035370.1 mouse_genomes_project 9 113333565 113451469 + MGP_129S1SvImJ_P0094985 Lrrfip2 protein_coding protein_coding MGP_129S1SvImJ_T0094986.1 MGP_129S1SvImJ_G0035370.1 mouse_genomes_project 9 113333567 113450026 + MGP_129S1SvImJ_P0094986 Lrrfip2 protein_coding protein_coding MGP_129S1SvImJ_T0094987.1 MGP_129S1SvImJ_G0035370.1 mouse_genomes_project 9 113333578 113451471 + MGP_129S1SvImJ_P0094987 Lrrfip2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0094988.1 MGP_129S1SvImJ_G0035370.1 mouse_genomes_project 9 113333589 113451469 + MGP_129S1SvImJ_P0094988 Lrrfip2 protein_coding protein_coding MGP_129S1SvImJ_T0094989.1 MGP_129S1SvImJ_G0035370.1 mouse_genomes_project 9 113333900 113450026 + MGP_129S1SvImJ_P0094989 Lrrfip2 protein_coding protein_coding MGP_129S1SvImJ_T0094990.1 MGP_129S1SvImJ_G0035370.1 mouse_genomes_project 9 113335122 113450026 + MGP_129S1SvImJ_P0094990 Lrrfip2 protein_coding protein_coding MGP_129S1SvImJ_T0094992.1 MGP_129S1SvImJ_G0035370.1 mouse_genomes_project 9 113405849 113440098 + MGP_129S1SvImJ_P0094992 Lrrfip2 protein_coding protein_coding MGP_129S1SvImJ_T0094993.1 MGP_129S1SvImJ_G0035370.1 mouse_genomes_project 9 113413788 113451469 + Lrrfip2 protein_coding processed_transcript MGP_129S1SvImJ_T0094994.1 MGP_129S1SvImJ_G0035370.1 mouse_genomes_project 9 113419889 113427023 + Lrrfip2 protein_coding retained_intron MGP_129S1SvImJ_T0094995.1 MGP_129S1SvImJ_G0035370.1 mouse_genomes_project 9 113440091 113442341 + Lrrfip2 protein_coding retained_intron MGP_129S1SvImJ_T0094996.1 MGP_129S1SvImJ_G0035370.1 mouse_genomes_project 9 113444975 113449757 + Lrrfip2 protein_coding retained_intron MGP_129S1SvImJ_T0093779.1 MGP_129S1SvImJ_G0035162.1 mouse_genomes_project 9 100285705 100288204 + MGP_129S1SvImJ_P0093779 Foxl2 protein_coding protein_coding MGP_129S1SvImJ_T0009308.1 MGP_129S1SvImJ_G0007481.1 mouse_genomes_project 9 93769845 93796092 + lincRNA lincRNA MGP_129S1SvImJ_T0009309.1 MGP_129S1SvImJ_G0007481.1 mouse_genomes_project 9 93771105 93848921 + lincRNA lincRNA MGP_129S1SvImJ_T0011060.1 MGP_129S1SvImJ_G0009176.1 mouse_genomes_project 9 6778854 6778945 + Mir6237 miRNA miRNA MGP_129S1SvImJ_T0093559.1 MGP_129S1SvImJ_G0035112.1 mouse_genomes_project 9 89465695 89473228 + MGP_129S1SvImJ_P0093559 protein_coding protein_coding MGP_129S1SvImJ_T0098666.1 MGP_129S1SvImJ_G0036751.1 mouse_genomes_project 9 74306246 74306365 + n-R5s86 rRNA rRNA MGP_129S1SvImJ_T0093440.1 MGP_129S1SvImJ_G0035087.1 mouse_genomes_project 9 84224860 84316757 + MGP_129S1SvImJ_P0093440 Sh3bgrl2 protein_coding protein_coding MGP_129S1SvImJ_T0093441.1 MGP_129S1SvImJ_G0035087.1 mouse_genomes_project 9 84224862 84225545 + Sh3bgrl2 protein_coding retained_intron MGP_129S1SvImJ_T0093442.1 MGP_129S1SvImJ_G0035087.1 mouse_genomes_project 9 84224883 84316256 + MGP_129S1SvImJ_P0093442 Sh3bgrl2 protein_coding protein_coding MGP_129S1SvImJ_T0093443.1 MGP_129S1SvImJ_G0035087.1 mouse_genomes_project 9 84224910 84279644 + MGP_129S1SvImJ_P0093443 Sh3bgrl2 protein_coding protein_coding MGP_129S1SvImJ_T0095264.1 MGP_129S1SvImJ_G0035445.1 mouse_genomes_project 9 124629373 124656072 - MGP_129S1SvImJ_P0095264 Sec22c protein_coding protein_coding MGP_129S1SvImJ_T0095265.1 MGP_129S1SvImJ_G0035445.1 mouse_genomes_project 9 124633938 124656508 - MGP_129S1SvImJ_P0095265 Sec22c protein_coding protein_coding MGP_129S1SvImJ_T0095266.1 MGP_129S1SvImJ_G0035445.1 mouse_genomes_project 9 124635467 124656022 - MGP_129S1SvImJ_P0095266 Sec22c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095267.1 MGP_129S1SvImJ_G0035445.1 mouse_genomes_project 9 124639172 124641448 - Sec22c protein_coding retained_intron MGP_129S1SvImJ_T0095268.1 MGP_129S1SvImJ_G0035445.1 mouse_genomes_project 9 124646590 124656533 - MGP_129S1SvImJ_P0095268 Sec22c protein_coding protein_coding MGP_129S1SvImJ_T0092337.1 MGP_129S1SvImJ_G0034795.1 mouse_genomes_project 9 49969697 49990405 - MGP_129S1SvImJ_P0092337 Layn protein_coding protein_coding MGP_129S1SvImJ_T0094482.1 MGP_129S1SvImJ_G0035285.1 mouse_genomes_project 9 110009500 110014068 + MGP_129S1SvImJ_P0094482 Mst1 protein_coding protein_coding MGP_129S1SvImJ_T0094483.1 MGP_129S1SvImJ_G0035285.1 mouse_genomes_project 9 110009518 110014060 + MGP_129S1SvImJ_P0094483 Mst1 protein_coding protein_coding MGP_129S1SvImJ_T0094484.1 MGP_129S1SvImJ_G0035285.1 mouse_genomes_project 9 110009547 110011379 + MGP_129S1SvImJ_P0094484 Mst1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094485.1 MGP_129S1SvImJ_G0035285.1 mouse_genomes_project 9 110013369 110014063 + MGP_129S1SvImJ_P0094485 Mst1 protein_coding protein_coding MGP_129S1SvImJ_T0002438.1 MGP_129S1SvImJ_G0002347.1 mouse_genomes_project 9 93597141 93601210 - TEC TEC MGP_129S1SvImJ_T0091363.1 MGP_129S1SvImJ_G0034425.1 mouse_genomes_project 9 17815691 17877051 - MGP_129S1SvImJ_P0091363 Olfm2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091364.1 MGP_129S1SvImJ_G0034425.1 mouse_genomes_project 9 17815989 17878490 - MGP_129S1SvImJ_P0091364 Olfm2 protein_coding protein_coding MGP_129S1SvImJ_T0092553.1 MGP_129S1SvImJ_G0034875.1 mouse_genomes_project 9 56906746 56913457 - MGP_129S1SvImJ_P0092553 Cyp1a2 protein_coding protein_coding MGP_129S1SvImJ_T0009351.1 MGP_129S1SvImJ_G0007514.1 mouse_genomes_project 9 114510890 114512634 + 2900079G21Rik lincRNA lincRNA MGP_129S1SvImJ_T0009352.1 MGP_129S1SvImJ_G0007514.1 mouse_genomes_project 9 114510907 114561220 + 2900079G21Rik lincRNA lincRNA MGP_129S1SvImJ_T0009353.1 MGP_129S1SvImJ_G0007514.1 mouse_genomes_project 9 114510994 114512632 + 2900079G21Rik lincRNA lincRNA MGP_129S1SvImJ_T0009354.1 MGP_129S1SvImJ_G0007514.1 mouse_genomes_project 9 114534540 114630428 + 2900079G21Rik lincRNA lincRNA MGP_129S1SvImJ_T0005452.1 MGP_129S1SvImJ_G0004620.1 mouse_genomes_project 9 40821222 40853135 + Gm16322 antisense antisense MGP_129S1SvImJ_T0005453.1 MGP_129S1SvImJ_G0004620.1 mouse_genomes_project 9 40822241 40849884 + Gm16322 antisense antisense MGP_129S1SvImJ_T0005536.1 MGP_129S1SvImJ_G0004674.1 mouse_genomes_project 9 105185824 105194614 + 4932413F04Rik antisense antisense MGP_129S1SvImJ_T0093656.1 MGP_129S1SvImJ_G0035137.1 mouse_genomes_project 9 96838279 96889094 - MGP_129S1SvImJ_P0093656 Trpc1 protein_coding protein_coding MGP_129S1SvImJ_T0093657.1 MGP_129S1SvImJ_G0035137.1 mouse_genomes_project 9 96839824 96889094 - MGP_129S1SvImJ_P0093657 Trpc1 protein_coding protein_coding MGP_129S1SvImJ_T0093658.1 MGP_129S1SvImJ_G0035137.1 mouse_genomes_project 9 96839824 96889094 - MGP_129S1SvImJ_P0093658 Trpc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093659.1 MGP_129S1SvImJ_G0035137.1 mouse_genomes_project 9 96839824 96889094 - MGP_129S1SvImJ_P0093659 Trpc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093660.1 MGP_129S1SvImJ_G0035137.1 mouse_genomes_project 9 96850841 96853949 - Trpc1 protein_coding retained_intron MGP_129S1SvImJ_T0093661.1 MGP_129S1SvImJ_G0035137.1 mouse_genomes_project 9 96856555 96869117 - MGP_129S1SvImJ_P0093661 Trpc1 protein_coding protein_coding MGP_129S1SvImJ_T0093662.1 MGP_129S1SvImJ_G0035137.1 mouse_genomes_project 9 96887773 96889111 - Trpc1 protein_coding retained_intron MGP_129S1SvImJ_T0091821.1 MGP_129S1SvImJ_G0034594.1 mouse_genomes_project 9 36413610 36414606 + MGP_129S1SvImJ_P0091821 Olfr250 protein_coding protein_coding MGP_129S1SvImJ_T0002466.1 MGP_129S1SvImJ_G0002375.1 mouse_genomes_project 9 105071741 105072059 + TEC TEC MGP_129S1SvImJ_T0093622.1 MGP_129S1SvImJ_G0035127.1 mouse_genomes_project 9 93324994 93347791 + MGP_129S1SvImJ_P0093622 Plscr2 protein_coding protein_coding MGP_129S1SvImJ_T0093623.1 MGP_129S1SvImJ_G0035127.1 mouse_genomes_project 9 93325018 93331465 + MGP_129S1SvImJ_P0093623 Plscr2 protein_coding protein_coding MGP_129S1SvImJ_T0093624.1 MGP_129S1SvImJ_G0035127.1 mouse_genomes_project 9 93340978 93341841 + Plscr2 protein_coding retained_intron MGP_129S1SvImJ_T0011133.1 MGP_129S1SvImJ_G0009249.1 mouse_genomes_project 9 123862914 123862976 + Mir7090 miRNA miRNA MGP_129S1SvImJ_T0092294.1 MGP_129S1SvImJ_G0034788.1 mouse_genomes_project 9 49650807 49652083 - MGP_129S1SvImJ_P0092294 Hspb2 protein_coding protein_coding MGP_129S1SvImJ_T0093303.1 MGP_129S1SvImJ_G0035057.1 mouse_genomes_project 9 78547333 78575927 - MGP_129S1SvImJ_P0093303 Fbxo9 protein_coding protein_coding MGP_129S1SvImJ_T0093304.1 MGP_129S1SvImJ_G0035057.1 mouse_genomes_project 9 78547336 78576336 - MGP_129S1SvImJ_P0093304 Fbxo9 protein_coding protein_coding MGP_129S1SvImJ_T0093305.1 MGP_129S1SvImJ_G0035057.1 mouse_genomes_project 9 78547675 78550389 - Fbxo9 protein_coding retained_intron MGP_129S1SvImJ_T0093306.1 MGP_129S1SvImJ_G0035057.1 mouse_genomes_project 9 78551355 78553344 - Fbxo9 protein_coding retained_intron MGP_129S1SvImJ_T0093307.1 MGP_129S1SvImJ_G0035057.1 mouse_genomes_project 9 78561198 78575875 - MGP_129S1SvImJ_P0093307 Fbxo9 protein_coding protein_coding MGP_129S1SvImJ_T0093308.1 MGP_129S1SvImJ_G0035057.1 mouse_genomes_project 9 78567074 78575858 - MGP_129S1SvImJ_P0093308 Fbxo9 protein_coding protein_coding MGP_129S1SvImJ_T0092854.1 MGP_129S1SvImJ_G0034955.1 mouse_genomes_project 9 65088727 65109571 + MGP_129S1SvImJ_P0092854 Ubap1l protein_coding protein_coding MGP_129S1SvImJ_T0094951.1 MGP_129S1SvImJ_G0035363.1 mouse_genomes_project 9 113071445 113074298 + Als2cl protein_coding processed_transcript MGP_129S1SvImJ_T0094952.1 MGP_129S1SvImJ_G0035363.1 mouse_genomes_project 9 113071749 113092108 + MGP_129S1SvImJ_P0094952 Als2cl protein_coding protein_coding MGP_129S1SvImJ_T0094953.1 MGP_129S1SvImJ_G0035363.1 mouse_genomes_project 9 113071781 113092114 + MGP_129S1SvImJ_P0094953 Als2cl protein_coding protein_coding MGP_129S1SvImJ_T0094954.1 MGP_129S1SvImJ_G0035363.1 mouse_genomes_project 9 113071808 113076469 + MGP_129S1SvImJ_P0094954 Als2cl protein_coding protein_coding MGP_129S1SvImJ_T0094955.1 MGP_129S1SvImJ_G0035363.1 mouse_genomes_project 9 113071912 113092111 + MGP_129S1SvImJ_P0094955 Als2cl protein_coding protein_coding MGP_129S1SvImJ_T0094956.1 MGP_129S1SvImJ_G0035363.1 mouse_genomes_project 9 113077336 113078897 + Als2cl protein_coding retained_intron MGP_129S1SvImJ_T0094957.1 MGP_129S1SvImJ_G0035363.1 mouse_genomes_project 9 113077877 113081723 + Als2cl protein_coding retained_intron MGP_129S1SvImJ_T0094958.1 MGP_129S1SvImJ_G0035363.1 mouse_genomes_project 9 113079565 113092112 + Als2cl protein_coding processed_transcript MGP_129S1SvImJ_T0091450.1 MGP_129S1SvImJ_G0034457.1 mouse_genomes_project 9 18821028 18825151 - MGP_129S1SvImJ_P0091450 Yipf2 protein_coding protein_coding MGP_129S1SvImJ_T0091451.1 MGP_129S1SvImJ_G0034457.1 mouse_genomes_project 9 18821028 18825151 - MGP_129S1SvImJ_P0091451 Yipf2 protein_coding protein_coding MGP_129S1SvImJ_T0091452.1 MGP_129S1SvImJ_G0034457.1 mouse_genomes_project 9 18821028 18825151 - MGP_129S1SvImJ_P0091452 Yipf2 protein_coding protein_coding MGP_129S1SvImJ_T0016113.1 MGP_129S1SvImJ_G0014202.1 mouse_genomes_project 9 89156872 89157694 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016128.1 MGP_129S1SvImJ_G0014217.1 mouse_genomes_project 9 94464527 94465530 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100196.1 MGP_129S1SvImJ_G0038263.1 mouse_genomes_project 9 76315792 76315876 - Gm25300 snRNA snRNA MGP_129S1SvImJ_T0095054.1 MGP_129S1SvImJ_G0035377.1 mouse_genomes_project 9 115848640 115860094 - MGP_129S1SvImJ_P0095054 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0099021.1 MGP_129S1SvImJ_G0037093.1 mouse_genomes_project 9 89319219 89321372 - Gm28229 sense_intronic sense_intronic MGP_129S1SvImJ_T0093654.1 MGP_129S1SvImJ_G0035136.1 mouse_genomes_project 9 96767237 96831292 + MGP_129S1SvImJ_P0093654 Pcolce2 protein_coding protein_coding MGP_129S1SvImJ_T0093655.1 MGP_129S1SvImJ_G0035136.1 mouse_genomes_project 9 96811557 96827879 + Pcolce2 protein_coding processed_transcript MGP_129S1SvImJ_T0094536.1 MGP_129S1SvImJ_G0035297.1 mouse_genomes_project 9 110394185 110405207 + MGP_129S1SvImJ_P0094536 BC048562 protein_coding protein_coding MGP_129S1SvImJ_T0094537.1 MGP_129S1SvImJ_G0035297.1 mouse_genomes_project 9 110394197 110405007 + BC048562 protein_coding processed_transcript MGP_129S1SvImJ_T0016145.1 MGP_129S1SvImJ_G0014234.1 mouse_genomes_project 9 101339241 101340067 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091628.1 MGP_129S1SvImJ_G0034524.1 mouse_genomes_project 9 30121970 30149473 + MGP_129S1SvImJ_P0091628 Kcnj1 protein_coding protein_coding MGP_129S1SvImJ_T0091629.1 MGP_129S1SvImJ_G0034524.1 mouse_genomes_project 9 30144275 30149473 + MGP_129S1SvImJ_P0091629 Kcnj1 protein_coding protein_coding MGP_129S1SvImJ_T0005484.1 MGP_129S1SvImJ_G0004639.1 mouse_genomes_project 9 66665263 66669461 - BC050972 antisense antisense MGP_129S1SvImJ_T0005485.1 MGP_129S1SvImJ_G0004639.1 mouse_genomes_project 9 66665496 66669161 - BC050972 antisense antisense MGP_129S1SvImJ_T0005486.1 MGP_129S1SvImJ_G0004639.1 mouse_genomes_project 9 66665525 66670963 - BC050972 antisense antisense MGP_129S1SvImJ_T0009253.1 MGP_129S1SvImJ_G0007436.1 mouse_genomes_project 9 55756536 55764323 + Gm26868 lincRNA lincRNA MGP_129S1SvImJ_T0009286.1 MGP_129S1SvImJ_G0007463.1 mouse_genomes_project 9 78646875 78649841 + C920006O11Rik lincRNA lincRNA MGP_129S1SvImJ_T0092558.1 MGP_129S1SvImJ_G0034878.1 mouse_genomes_project 9 56988038 57002844 - MGP_129S1SvImJ_P0092558 Clk3 protein_coding protein_coding MGP_129S1SvImJ_T0094078.1 MGP_129S1SvImJ_G0035221.1 mouse_genomes_project 9 107951270 107973075 + MGP_129S1SvImJ_P0094078 Wdr82 protein_coding protein_coding MGP_129S1SvImJ_T0094079.1 MGP_129S1SvImJ_G0035221.1 mouse_genomes_project 9 107951271 107956061 + Wdr82 protein_coding retained_intron MGP_129S1SvImJ_T0094080.1 MGP_129S1SvImJ_G0035221.1 mouse_genomes_project 9 107958724 107968456 + MGP_129S1SvImJ_P0094080 Wdr82 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091854.1 MGP_129S1SvImJ_G0034621.1 mouse_genomes_project 9 37072939 37073866 - MGP_129S1SvImJ_P0091854 Olfr935 protein_coding protein_coding MGP_129S1SvImJ_T0094867.1 MGP_129S1SvImJ_G0035345.1 mouse_genomes_project 9 112476784 112517432 + MGP_129S1SvImJ_P0094867 Scap protein_coding protein_coding MGP_129S1SvImJ_T0094868.1 MGP_129S1SvImJ_G0035345.1 mouse_genomes_project 9 112476792 112497667 + Scap protein_coding retained_intron MGP_129S1SvImJ_T0094869.1 MGP_129S1SvImJ_G0035345.1 mouse_genomes_project 9 112476852 112530388 + MGP_129S1SvImJ_P0094869 Scap protein_coding protein_coding MGP_129S1SvImJ_T0094870.1 MGP_129S1SvImJ_G0035345.1 mouse_genomes_project 9 112477046 112497515 + MGP_129S1SvImJ_P0094870 Scap protein_coding protein_coding MGP_129S1SvImJ_T0094871.1 MGP_129S1SvImJ_G0035345.1 mouse_genomes_project 9 112477132 112516664 + MGP_129S1SvImJ_P0094871 Scap protein_coding protein_coding MGP_129S1SvImJ_T0094872.1 MGP_129S1SvImJ_G0035345.1 mouse_genomes_project 9 112488555 112497515 + MGP_129S1SvImJ_P0094872 Scap protein_coding protein_coding MGP_129S1SvImJ_T0094873.1 MGP_129S1SvImJ_G0035345.1 mouse_genomes_project 9 112505474 112507975 + Scap protein_coding retained_intron MGP_129S1SvImJ_T0094874.1 MGP_129S1SvImJ_G0035345.1 mouse_genomes_project 9 112505907 112516633 + Scap protein_coding processed_transcript MGP_129S1SvImJ_T0094875.1 MGP_129S1SvImJ_G0035345.1 mouse_genomes_project 9 112518660 112521040 + Scap protein_coding retained_intron MGP_129S1SvImJ_T0094876.1 MGP_129S1SvImJ_G0035345.1 mouse_genomes_project 9 112522633 112523117 + Scap protein_coding retained_intron MGP_129S1SvImJ_T0093686.1 MGP_129S1SvImJ_G0035141.1 mouse_genomes_project 9 97281712 97353059 + MGP_129S1SvImJ_P0093686 Gk5 protein_coding protein_coding MGP_129S1SvImJ_T0093687.1 MGP_129S1SvImJ_G0035141.1 mouse_genomes_project 9 97281725 97357477 + MGP_129S1SvImJ_P0093687 Gk5 protein_coding protein_coding MGP_129S1SvImJ_T0093688.1 MGP_129S1SvImJ_G0035141.1 mouse_genomes_project 9 97281782 97355679 + MGP_129S1SvImJ_P0093688 Gk5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093689.1 MGP_129S1SvImJ_G0035141.1 mouse_genomes_project 9 97286569 97307669 + Gk5 protein_coding processed_transcript MGP_129S1SvImJ_T0093690.1 MGP_129S1SvImJ_G0035141.1 mouse_genomes_project 9 97343762 97346313 + Gk5 protein_coding retained_intron MGP_129S1SvImJ_T0005581.1 MGP_129S1SvImJ_G0004709.1 mouse_genomes_project 9 124526830 124543813 + Lyzl4os antisense antisense MGP_129S1SvImJ_T0005582.1 MGP_129S1SvImJ_G0004709.1 mouse_genomes_project 9 124526853 124554057 + Lyzl4os antisense antisense MGP_129S1SvImJ_T0095087.1 MGP_129S1SvImJ_G0035395.1 mouse_genomes_project 9 117251075 117318884 - MGP_129S1SvImJ_P0095087 Cmtm8 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0093264.1 MGP_129S1SvImJ_G0035048.1 mouse_genomes_project 9 76586593 76692879 - MGP_129S1SvImJ_P0093264 Hcrtr2 protein_coding protein_coding MGP_129S1SvImJ_T0093265.1 MGP_129S1SvImJ_G0035048.1 mouse_genomes_project 9 76590699 76693124 - MGP_129S1SvImJ_P0093265 Hcrtr2 protein_coding protein_coding MGP_129S1SvImJ_T0093266.1 MGP_129S1SvImJ_G0035048.1 mouse_genomes_project 9 76690943 76692590 - Hcrtr2 protein_coding retained_intron MGP_129S1SvImJ_T0092759.1 MGP_129S1SvImJ_G0034927.1 mouse_genomes_project 9 62727276 62738060 - MGP_129S1SvImJ_P0092759 Skor1 protein_coding protein_coding MGP_129S1SvImJ_T0092760.1 MGP_129S1SvImJ_G0034927.1 mouse_genomes_project 9 62727276 62736110 - MGP_129S1SvImJ_P0092760 Skor1 protein_coding protein_coding MGP_129S1SvImJ_T0092761.1 MGP_129S1SvImJ_G0034927.1 mouse_genomes_project 9 62727282 62736079 - MGP_129S1SvImJ_P0092761 Skor1 protein_coding protein_coding MGP_129S1SvImJ_T0009349.1 MGP_129S1SvImJ_G0007512.1 mouse_genomes_project 9 113788770 113793689 - Gm42523 lincRNA lincRNA MGP_129S1SvImJ_T0092355.1 MGP_129S1SvImJ_G0034805.1 mouse_genomes_project 9 51088323 51145166 - MGP_129S1SvImJ_P0092355 Zc3h12c protein_coding protein_coding MGP_129S1SvImJ_T0092356.1 MGP_129S1SvImJ_G0034805.1 mouse_genomes_project 9 51091768 51145580 - MGP_129S1SvImJ_P0092356 Zc3h12c protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091791.1 MGP_129S1SvImJ_G0034569.1 mouse_genomes_project 9 35605220 35615642 - MGP_129S1SvImJ_P0091791 Spa17 protein_coding protein_coding MGP_129S1SvImJ_T0093362.1 MGP_129S1SvImJ_G0035075.1 mouse_genomes_project 9 80292656 80297283 - MGP_129S1SvImJ_P0093362 Cox7a2 protein_coding protein_coding MGP_129S1SvImJ_T0101469.1 MGP_129S1SvImJ_G0039536.1 mouse_genomes_project 9 70552652 70552765 + Gm24615 snoRNA snoRNA MGP_129S1SvImJ_T0095303.1 MGP_129S1SvImJ_G0035458.1 mouse_genomes_project 9 125092412 125113564 + MGP_129S1SvImJ_P0095303 Snrk protein_coding protein_coding MGP_129S1SvImJ_T0095304.1 MGP_129S1SvImJ_G0035458.1 mouse_genomes_project 9 125092439 125113672 + MGP_129S1SvImJ_P0095304 Snrk protein_coding protein_coding MGP_129S1SvImJ_T0095305.1 MGP_129S1SvImJ_G0035458.1 mouse_genomes_project 9 125092468 125148096 + MGP_129S1SvImJ_P0095305 Snrk protein_coding protein_coding MGP_129S1SvImJ_T0095306.1 MGP_129S1SvImJ_G0035458.1 mouse_genomes_project 9 125092476 125142807 + MGP_129S1SvImJ_P0095306 Snrk protein_coding protein_coding MGP_129S1SvImJ_T0095307.1 MGP_129S1SvImJ_G0035458.1 mouse_genomes_project 9 125092488 125113519 + MGP_129S1SvImJ_P0095307 Snrk protein_coding protein_coding MGP_129S1SvImJ_T0095308.1 MGP_129S1SvImJ_G0035458.1 mouse_genomes_project 9 125092881 125113364 + Snrk protein_coding processed_transcript MGP_129S1SvImJ_T0095309.1 MGP_129S1SvImJ_G0035458.1 mouse_genomes_project 9 125137897 125142809 + Snrk protein_coding retained_intron MGP_129S1SvImJ_T0095310.1 MGP_129S1SvImJ_G0035458.1 mouse_genomes_project 9 125140286 125142908 + Snrk protein_coding retained_intron MGP_129S1SvImJ_T0016121.1 MGP_129S1SvImJ_G0014210.1 mouse_genomes_project 9 91901836 91902128 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091816.1 MGP_129S1SvImJ_G0034589.1 mouse_genomes_project 9 36269357 36270306 + MGP_129S1SvImJ_P0091816 Olfr894 protein_coding protein_coding MGP_129S1SvImJ_T0092142.1 MGP_129S1SvImJ_G0034741.1 mouse_genomes_project 9 44431166 44456941 + MGP_129S1SvImJ_P0092142 Bace1 protein_coding protein_coding MGP_129S1SvImJ_T0092143.1 MGP_129S1SvImJ_G0034741.1 mouse_genomes_project 9 44431166 44455058 + MGP_129S1SvImJ_P0092143 Bace1 protein_coding protein_coding MGP_129S1SvImJ_T0092144.1 MGP_129S1SvImJ_G0034741.1 mouse_genomes_project 9 44431826 44449770 + MGP_129S1SvImJ_P0092144 Bace1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092145.1 MGP_129S1SvImJ_G0034741.1 mouse_genomes_project 9 44432500 44447304 + Bace1 protein_coding processed_transcript MGP_129S1SvImJ_T0092146.1 MGP_129S1SvImJ_G0034741.1 mouse_genomes_project 9 44445321 44454801 + Bace1 protein_coding retained_intron MGP_129S1SvImJ_T0092147.1 MGP_129S1SvImJ_G0034741.1 mouse_genomes_project 9 44447223 44452940 + MGP_129S1SvImJ_P0092147 Bace1 protein_coding protein_coding MGP_129S1SvImJ_T0093753.1 MGP_129S1SvImJ_G0035150.1 mouse_genomes_project 9 98604649 98626553 - MGP_129S1SvImJ_P0093753 Trim42 protein_coding protein_coding MGP_129S1SvImJ_T0094125.1 MGP_129S1SvImJ_G0035231.1 mouse_genomes_project 9 108256156 108259945 + MGP_129S1SvImJ_P0094125 Abhd14b protein_coding protein_coding MGP_129S1SvImJ_T0094126.1 MGP_129S1SvImJ_G0035231.1 mouse_genomes_project 9 108256160 108259970 + MGP_129S1SvImJ_P0094126 Abhd14b protein_coding protein_coding MGP_129S1SvImJ_T0094127.1 MGP_129S1SvImJ_G0035231.1 mouse_genomes_project 9 108256573 108260466 + MGP_129S1SvImJ_P0094127 Abhd14b protein_coding protein_coding MGP_129S1SvImJ_T0094128.1 MGP_129S1SvImJ_G0035231.1 mouse_genomes_project 9 108256986 108261276 + MGP_129S1SvImJ_P0094128 Abhd14b protein_coding protein_coding MGP_129S1SvImJ_T0094129.1 MGP_129S1SvImJ_G0035231.1 mouse_genomes_project 9 108257021 108260434 + MGP_129S1SvImJ_P0094129 Abhd14b protein_coding protein_coding MGP_129S1SvImJ_T0094130.1 MGP_129S1SvImJ_G0035231.1 mouse_genomes_project 9 108257060 108260406 + MGP_129S1SvImJ_P0094130 Abhd14b protein_coding protein_coding MGP_129S1SvImJ_T0095207.1 MGP_129S1SvImJ_G0035429.1 mouse_genomes_project 9 122828033 122837877 - MGP_129S1SvImJ_P0095207 Xirp1 protein_coding protein_coding MGP_129S1SvImJ_T0095408.1 MGP_129S1SvImJ_G0035494.1 mouse_genomes_project 9 127450375 127473681 - MGP_129S1SvImJ_P0095408 2010315B03Rik protein_coding protein_coding MGP_129S1SvImJ_T0095409.1 MGP_129S1SvImJ_G0035494.1 mouse_genomes_project 9 127452193 127473627 - MGP_129S1SvImJ_P0095409 2010315B03Rik protein_coding protein_coding MGP_129S1SvImJ_T0095410.1 MGP_129S1SvImJ_G0035494.1 mouse_genomes_project 9 127452383 127472888 - MGP_129S1SvImJ_P0095410 2010315B03Rik protein_coding protein_coding MGP_129S1SvImJ_T0095411.1 MGP_129S1SvImJ_G0035494.1 mouse_genomes_project 9 127452395 127473656 - MGP_129S1SvImJ_P0095411 2010315B03Rik protein_coding protein_coding MGP_129S1SvImJ_T0095412.1 MGP_129S1SvImJ_G0035494.1 mouse_genomes_project 9 127459268 127473656 - 2010315B03Rik protein_coding processed_transcript MGP_129S1SvImJ_T0100212.1 MGP_129S1SvImJ_G0038279.1 mouse_genomes_project 9 107766811 107766888 + Gm24631 snRNA snRNA MGP_129S1SvImJ_T0091564.1 MGP_129S1SvImJ_G0034504.1 mouse_genomes_project 9 24456119 24467759 + MGP_129S1SvImJ_P0091564 Thyn1 protein_coding protein_coding MGP_129S1SvImJ_T0009357.1 MGP_129S1SvImJ_G0007517.1 mouse_genomes_project 9 121072067 121076345 - lincRNA lincRNA MGP_129S1SvImJ_T0091969.1 MGP_129S1SvImJ_G0034686.1 mouse_genomes_project 9 42168713 42232306 + MGP_129S1SvImJ_P0091969 Nectin1 protein_coding protein_coding MGP_129S1SvImJ_T0093146.1 MGP_129S1SvImJ_G0035017.1 mouse_genomes_project 9 72835928 72931075 + MGP_129S1SvImJ_P0093146 Nedd4 protein_coding protein_coding MGP_129S1SvImJ_T0093147.1 MGP_129S1SvImJ_G0035017.1 mouse_genomes_project 9 72836020 72845632 + Nedd4 protein_coding retained_intron MGP_129S1SvImJ_T0093148.1 MGP_129S1SvImJ_G0035017.1 mouse_genomes_project 9 72836064 72898904 + MGP_129S1SvImJ_P0093148 Nedd4 protein_coding protein_coding MGP_129S1SvImJ_T0093149.1 MGP_129S1SvImJ_G0035017.1 mouse_genomes_project 9 72836069 72890072 + MGP_129S1SvImJ_P0093149 Nedd4 protein_coding protein_coding MGP_129S1SvImJ_T0093150.1 MGP_129S1SvImJ_G0035017.1 mouse_genomes_project 9 72836072 72836884 + Nedd4 protein_coding processed_transcript MGP_129S1SvImJ_T0093151.1 MGP_129S1SvImJ_G0035017.1 mouse_genomes_project 9 72842254 72845613 + Nedd4 protein_coding retained_intron MGP_129S1SvImJ_T0093152.1 MGP_129S1SvImJ_G0035017.1 mouse_genomes_project 9 72842265 72898469 + MGP_129S1SvImJ_P0093152 Nedd4 protein_coding protein_coding MGP_129S1SvImJ_T0093153.1 MGP_129S1SvImJ_G0035017.1 mouse_genomes_project 9 72920696 72929382 + MGP_129S1SvImJ_P0093153 Nedd4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093154.1 MGP_129S1SvImJ_G0035017.1 mouse_genomes_project 9 72922670 72928374 + Nedd4 protein_coding retained_intron MGP_129S1SvImJ_T0093155.1 MGP_129S1SvImJ_G0035017.1 mouse_genomes_project 9 72927065 72928486 + Nedd4 protein_coding retained_intron MGP_129S1SvImJ_T0016143.1 MGP_129S1SvImJ_G0014232.1 mouse_genomes_project 9 99599695 99600272 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098410.1 MGP_129S1SvImJ_G0036495.1 mouse_genomes_project 9 112163382 112166561 + pseudogene pseudogene MGP_129S1SvImJ_T0093913.1 MGP_129S1SvImJ_G0035191.1 mouse_genomes_project 9 104419454 104497576 + MGP_129S1SvImJ_P0093913 Ryk protein_coding protein_coding MGP_129S1SvImJ_T0093914.1 MGP_129S1SvImJ_G0035191.1 mouse_genomes_project 9 104419509 104497987 + MGP_129S1SvImJ_P0093914 Ryk protein_coding protein_coding MGP_129S1SvImJ_T0093915.1 MGP_129S1SvImJ_G0035191.1 mouse_genomes_project 9 104419519 104498339 + MGP_129S1SvImJ_P0093915 Ryk protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093916.1 MGP_129S1SvImJ_G0035191.1 mouse_genomes_project 9 104429867 104447503 + Ryk protein_coding processed_transcript MGP_129S1SvImJ_T0093917.1 MGP_129S1SvImJ_G0035191.1 mouse_genomes_project 9 104459214 104471757 + Ryk protein_coding retained_intron MGP_129S1SvImJ_T0093918.1 MGP_129S1SvImJ_G0035191.1 mouse_genomes_project 9 104488587 104489579 + Ryk protein_coding retained_intron MGP_129S1SvImJ_T0094769.1 MGP_129S1SvImJ_G0035329.1 mouse_genomes_project 9 111162532 111182123 - MGP_129S1SvImJ_P0094769 Fbxw13 protein_coding protein_coding MGP_129S1SvImJ_T0094770.1 MGP_129S1SvImJ_G0035329.1 mouse_genomes_project 9 111162553 111182110 - MGP_129S1SvImJ_P0094770 Fbxw13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094771.1 MGP_129S1SvImJ_G0035329.1 mouse_genomes_project 9 111164829 111181668 - MGP_129S1SvImJ_P0094771 Fbxw13 protein_coding protein_coding MGP_129S1SvImJ_T0091594.1 MGP_129S1SvImJ_G0034514.1 mouse_genomes_project 9 28583955 28607872 + MGP_129S1SvImJ_P0091594 Adamts8 protein_coding protein_coding MGP_129S1SvImJ_T0091595.1 MGP_129S1SvImJ_G0034514.1 mouse_genomes_project 9 28584851 28608854 + MGP_129S1SvImJ_P0091595 Adamts8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0016165.1 MGP_129S1SvImJ_G0014254.1 mouse_genomes_project 9 110527894 110532885 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016081.1 MGP_129S1SvImJ_G0014170.1 mouse_genomes_project 9 74957434 74957741 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091719.1 MGP_129S1SvImJ_G0034554.1 mouse_genomes_project 9 34609744 34628539 - MGP_129S1SvImJ_P0091719 Chek1 protein_coding protein_coding MGP_129S1SvImJ_T0091720.1 MGP_129S1SvImJ_G0034554.1 mouse_genomes_project 9 34609744 34628823 - MGP_129S1SvImJ_P0091720 Chek1 protein_coding protein_coding MGP_129S1SvImJ_T0091721.1 MGP_129S1SvImJ_G0034554.1 mouse_genomes_project 9 34610690 34628750 - MGP_129S1SvImJ_P0091721 Chek1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091722.1 MGP_129S1SvImJ_G0034554.1 mouse_genomes_project 9 34611407 34628033 - MGP_129S1SvImJ_P0091722 Chek1 protein_coding protein_coding MGP_129S1SvImJ_T0091723.1 MGP_129S1SvImJ_G0034554.1 mouse_genomes_project 9 34611407 34628033 - MGP_129S1SvImJ_P0091723 Chek1 protein_coding protein_coding MGP_129S1SvImJ_T0091724.1 MGP_129S1SvImJ_G0034554.1 mouse_genomes_project 9 34614998 34624165 - Chek1 protein_coding retained_intron MGP_129S1SvImJ_T0091725.1 MGP_129S1SvImJ_G0034554.1 mouse_genomes_project 9 34624068 34629230 - Chek1 protein_coding processed_transcript MGP_129S1SvImJ_T0091726.1 MGP_129S1SvImJ_G0034554.1 mouse_genomes_project 9 34625022 34628735 - Chek1 protein_coding retained_intron MGP_129S1SvImJ_T0091727.1 MGP_129S1SvImJ_G0034554.1 mouse_genomes_project 9 34625281 34628616 - MGP_129S1SvImJ_P0091727 Chek1 protein_coding protein_coding MGP_129S1SvImJ_T0091301.1 MGP_129S1SvImJ_G0034400.1 mouse_genomes_project 9 16786476 16787470 + MGP_129S1SvImJ_P0091301 Olfr857 protein_coding protein_coding MGP_129S1SvImJ_T0011772.1 MGP_129S1SvImJ_G0009888.1 mouse_genomes_project 9 125813313 125813581 + Gm25341 misc_RNA misc_RNA MGP_129S1SvImJ_T0091938.1 MGP_129S1SvImJ_G0034674.1 mouse_genomes_project 9 39262893 39409915 - MGP_129S1SvImJ_P0091938 Ubash3b protein_coding protein_coding MGP_129S1SvImJ_T0091939.1 MGP_129S1SvImJ_G0034674.1 mouse_genomes_project 9 39302976 39414316 - Ubash3b protein_coding processed_transcript MGP_129S1SvImJ_T0091940.1 MGP_129S1SvImJ_G0034674.1 mouse_genomes_project 9 39303004 39409991 - MGP_129S1SvImJ_P0091940 Ubash3b protein_coding protein_coding MGP_129S1SvImJ_T0091941.1 MGP_129S1SvImJ_G0034674.1 mouse_genomes_project 9 39303062 39414484 - MGP_129S1SvImJ_P0091941 Ubash3b protein_coding protein_coding MGP_129S1SvImJ_T0091942.1 MGP_129S1SvImJ_G0034674.1 mouse_genomes_project 9 39412317 39414493 - Ubash3b protein_coding processed_transcript MGP_129S1SvImJ_T0016114.1 MGP_129S1SvImJ_G0014203.1 mouse_genomes_project 9 90686696 90687159 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091906.1 MGP_129S1SvImJ_G0034666.1 mouse_genomes_project 9 38474519 38494563 + MGP_129S1SvImJ_P0091906 Scn3b protein_coding protein_coding MGP_129S1SvImJ_T0091907.1 MGP_129S1SvImJ_G0034666.1 mouse_genomes_project 9 38474649 38484894 + Scn3b protein_coding processed_transcript MGP_129S1SvImJ_T0091908.1 MGP_129S1SvImJ_G0034666.1 mouse_genomes_project 9 38474660 38483551 + Scn3b protein_coding retained_intron MGP_129S1SvImJ_T0091909.1 MGP_129S1SvImJ_G0034666.1 mouse_genomes_project 9 38474809 38482797 + Scn3b protein_coding retained_intron MGP_129S1SvImJ_T0091910.1 MGP_129S1SvImJ_G0034666.1 mouse_genomes_project 9 38475067 38494533 + MGP_129S1SvImJ_P0091910 Scn3b protein_coding protein_coding MGP_129S1SvImJ_T0009255.1 MGP_129S1SvImJ_G0007438.1 mouse_genomes_project 9 56347294 56359307 + 1700041C23Rik lincRNA lincRNA MGP_129S1SvImJ_T0016136.1 MGP_129S1SvImJ_G0014225.1 mouse_genomes_project 9 97741594 97742288 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0018631.1 MGP_129S1SvImJ_G0015767.1 mouse_genomes_project 9 126995271 127000361 + G530011O06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0092293.1 MGP_129S1SvImJ_G0034787.1 mouse_genomes_project 9 49639438 49646231 - MGP_129S1SvImJ_P0092293 2310030G06Rik protein_coding protein_coding MGP_129S1SvImJ_T0094473.1 MGP_129S1SvImJ_G0035284.1 mouse_genomes_project 9 109979348 109981896 + MGP_129S1SvImJ_P0094473 Amigo3 protein_coding protein_coding MGP_129S1SvImJ_T0002450.1 MGP_129S1SvImJ_G0002359.1 mouse_genomes_project 9 102159537 102160624 + TEC TEC MGP_129S1SvImJ_T0092552.1 MGP_129S1SvImJ_G0034874.1 mouse_genomes_project 9 56852009 56859594 - MGP_129S1SvImJ_P0092552 Csk protein_coding unknown_likely_coding MGP_129S1SvImJ_T0092614.1 MGP_129S1SvImJ_G0034889.1 mouse_genomes_project 9 57569874 57600340 - MGP_129S1SvImJ_P0092614 Loxl1 protein_coding protein_coding MGP_129S1SvImJ_T0000373.1 MGP_129S1SvImJ_G0000315.1 mouse_genomes_project 9 126129684 126129753 + mt-Ta Mt_tRNA Mt_tRNA MGP_129S1SvImJ_T0005487.1 MGP_129S1SvImJ_G0004640.1 mouse_genomes_project 9 66714328 66715172 + Gm17098 antisense antisense MGP_129S1SvImJ_T0092029.1 MGP_129S1SvImJ_G0034703.1 mouse_genomes_project 9 42820767 42829074 - MGP_129S1SvImJ_P0092029 Hmbs protein_coding protein_coding MGP_129S1SvImJ_T0092030.1 MGP_129S1SvImJ_G0034703.1 mouse_genomes_project 9 42820767 42830904 - MGP_129S1SvImJ_P0092030 Hmbs protein_coding protein_coding MGP_129S1SvImJ_T0091714.1 MGP_129S1SvImJ_G0034552.1 mouse_genomes_project 9 34543305 34546154 - MGP_129S1SvImJ_P0091714 A630095E13Rik protein_coding protein_coding MGP_129S1SvImJ_T0091715.1 MGP_129S1SvImJ_G0034552.1 mouse_genomes_project 9 34543305 34546154 - MGP_129S1SvImJ_P0091715 A630095E13Rik protein_coding protein_coding MGP_129S1SvImJ_T0091716.1 MGP_129S1SvImJ_G0034552.1 mouse_genomes_project 9 34543307 34550923 - A630095E13Rik protein_coding retained_intron MGP_129S1SvImJ_T0093529.1 MGP_129S1SvImJ_G0035106.1 mouse_genomes_project 9 89198017 89244813 + MGP_129S1SvImJ_P0093529 Nt5e protein_coding protein_coding MGP_129S1SvImJ_T0093530.1 MGP_129S1SvImJ_G0035106.1 mouse_genomes_project 9 89200086 89203670 + Nt5e protein_coding retained_intron MGP_129S1SvImJ_T0093531.1 MGP_129S1SvImJ_G0035106.1 mouse_genomes_project 9 89200101 89240540 + Nt5e protein_coding retained_intron MGP_129S1SvImJ_T0093814.1 MGP_129S1SvImJ_G0035171.1 mouse_genomes_project 9 100951488 100960601 + MGP_129S1SvImJ_P0093814 Dbr1 protein_coding protein_coding MGP_129S1SvImJ_T0093815.1 MGP_129S1SvImJ_G0035171.1 mouse_genomes_project 9 100951517 100958541 + MGP_129S1SvImJ_P0093815 Dbr1 protein_coding protein_coding MGP_129S1SvImJ_T0093816.1 MGP_129S1SvImJ_G0035171.1 mouse_genomes_project 9 100951769 100958149 + MGP_129S1SvImJ_P0093816 Dbr1 protein_coding protein_coding MGP_129S1SvImJ_T0093817.1 MGP_129S1SvImJ_G0035171.1 mouse_genomes_project 9 100951797 100958158 + MGP_129S1SvImJ_P0093817 Dbr1 protein_coding protein_coding MGP_129S1SvImJ_T0093818.1 MGP_129S1SvImJ_G0035171.1 mouse_genomes_project 9 100956301 100959938 + MGP_129S1SvImJ_P0093818 Dbr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093819.1 MGP_129S1SvImJ_G0035171.1 mouse_genomes_project 9 100956396 100958789 + MGP_129S1SvImJ_P0093819 Dbr1 protein_coding protein_coding MGP_129S1SvImJ_T0092495.1 MGP_129S1SvImJ_G0034854.1 mouse_genomes_project 9 56075437 56087117 - MGP_129S1SvImJ_P0092495 Snx33 protein_coding protein_coding MGP_129S1SvImJ_T0094805.1 MGP_129S1SvImJ_G0035340.1 mouse_genomes_project 9 112041304 112214613 + MGP_129S1SvImJ_P0094805 Map4 protein_coding protein_coding MGP_129S1SvImJ_T0094806.1 MGP_129S1SvImJ_G0035340.1 mouse_genomes_project 9 112041644 112127125 + MGP_129S1SvImJ_P0094806 Map4 protein_coding protein_coding MGP_129S1SvImJ_T0094807.1 MGP_129S1SvImJ_G0035340.1 mouse_genomes_project 9 112041708 112214605 + MGP_129S1SvImJ_P0094807 Map4 protein_coding protein_coding MGP_129S1SvImJ_T0094808.1 MGP_129S1SvImJ_G0035340.1 mouse_genomes_project 9 112086505 112124667 + Map4 protein_coding processed_transcript MGP_129S1SvImJ_T0094809.1 MGP_129S1SvImJ_G0035340.1 mouse_genomes_project 9 112150099 112154251 + Map4 protein_coding processed_transcript MGP_129S1SvImJ_T0094810.1 MGP_129S1SvImJ_G0035340.1 mouse_genomes_project 9 112162835 112203477 + MGP_129S1SvImJ_P0094810 Map4 protein_coding protein_coding MGP_129S1SvImJ_T0094811.1 MGP_129S1SvImJ_G0035340.1 mouse_genomes_project 9 112181611 112214604 + MGP_129S1SvImJ_P0094811 Map4 protein_coding protein_coding MGP_129S1SvImJ_T0094812.1 MGP_129S1SvImJ_G0035340.1 mouse_genomes_project 9 112181615 112213831 + MGP_129S1SvImJ_P0094812 Map4 protein_coding protein_coding MGP_129S1SvImJ_T0094813.1 MGP_129S1SvImJ_G0035340.1 mouse_genomes_project 9 112181633 112214611 + MGP_129S1SvImJ_P0094813 Map4 protein_coding protein_coding MGP_129S1SvImJ_T0094814.1 MGP_129S1SvImJ_G0035340.1 mouse_genomes_project 9 112193369 112199524 + Map4 protein_coding processed_transcript MGP_129S1SvImJ_T0094815.1 MGP_129S1SvImJ_G0035340.1 mouse_genomes_project 9 112198355 112212745 + MGP_129S1SvImJ_P0094815 Map4 protein_coding protein_coding MGP_129S1SvImJ_T0094816.1 MGP_129S1SvImJ_G0035340.1 mouse_genomes_project 9 112198355 112213155 + MGP_129S1SvImJ_P0094816 Map4 protein_coding protein_coding MGP_129S1SvImJ_T0094817.1 MGP_129S1SvImJ_G0035340.1 mouse_genomes_project 9 112199595 112212453 + MGP_129S1SvImJ_P0094817 Map4 protein_coding protein_coding MGP_129S1SvImJ_T0094818.1 MGP_129S1SvImJ_G0035340.1 mouse_genomes_project 9 112199619 112212572 + MGP_129S1SvImJ_P0094818 Map4 protein_coding protein_coding MGP_129S1SvImJ_T0094819.1 MGP_129S1SvImJ_G0035340.1 mouse_genomes_project 9 112208261 112210693 + Map4 protein_coding retained_intron MGP_129S1SvImJ_T0094820.1 MGP_129S1SvImJ_G0035340.1 mouse_genomes_project 9 112208710 112212808 + MGP_129S1SvImJ_P0094820 Map4 protein_coding protein_coding MGP_129S1SvImJ_T0094821.1 MGP_129S1SvImJ_G0035340.1 mouse_genomes_project 9 112210457 112213155 + MGP_129S1SvImJ_P0094821 Map4 protein_coding protein_coding MGP_129S1SvImJ_T0092497.1 MGP_129S1SvImJ_G0034856.1 mouse_genomes_project 9 56109532 56146012 + MGP_129S1SvImJ_P0092497 Snupn protein_coding protein_coding MGP_129S1SvImJ_T0093004.1 MGP_129S1SvImJ_G0034992.1 mouse_genomes_project 9 69447520 69486746 + MGP_129S1SvImJ_P0093004 Anxa2 protein_coding protein_coding MGP_129S1SvImJ_T0093005.1 MGP_129S1SvImJ_G0034992.1 mouse_genomes_project 9 69447616 69480193 + MGP_129S1SvImJ_P0093005 Anxa2 protein_coding protein_coding MGP_129S1SvImJ_T0093006.1 MGP_129S1SvImJ_G0034992.1 mouse_genomes_project 9 69447966 69478795 + MGP_129S1SvImJ_P0093006 Anxa2 protein_coding protein_coding MGP_129S1SvImJ_T0093007.1 MGP_129S1SvImJ_G0034992.1 mouse_genomes_project 9 69473384 69486746 + Anxa2 protein_coding retained_intron MGP_129S1SvImJ_T0093008.1 MGP_129S1SvImJ_G0034992.1 mouse_genomes_project 9 69475030 69486464 + MGP_129S1SvImJ_P0093008 Anxa2 protein_coding protein_coding MGP_129S1SvImJ_T0093009.1 MGP_129S1SvImJ_G0034992.1 mouse_genomes_project 9 69481718 69483044 + Anxa2 protein_coding retained_intron MGP_129S1SvImJ_T0011090.1 MGP_129S1SvImJ_G0009206.1 mouse_genomes_project 9 52420838 52420920 - Mir130c miRNA miRNA MGP_129S1SvImJ_T0101496.1 MGP_129S1SvImJ_G0039563.1 mouse_genomes_project 9 112253951 112254089 - Gm23377 snoRNA snoRNA MGP_129S1SvImJ_T0016095.1 MGP_129S1SvImJ_G0014184.1 mouse_genomes_project 9 80638082 80638410 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0092046.1 MGP_129S1SvImJ_G0034712.1 mouse_genomes_project 9 42978694 43007598 + MGP_129S1SvImJ_P0092046 Bcl9l protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091188.1 MGP_129S1SvImJ_G0034346.1 mouse_genomes_project 9 10747133 10766009 + MGP_129S1SvImJ_P0091188 Fam76b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091189.1 MGP_129S1SvImJ_G0034346.1 mouse_genomes_project 9 10747133 10766009 + MGP_129S1SvImJ_P0091189 Fam76b protein_coding protein_coding MGP_129S1SvImJ_T0091190.1 MGP_129S1SvImJ_G0034346.1 mouse_genomes_project 9 10747152 10750698 + Fam76b protein_coding retained_intron MGP_129S1SvImJ_T0091191.1 MGP_129S1SvImJ_G0034346.1 mouse_genomes_project 9 10756143 10759507 + Fam76b protein_coding retained_intron MGP_129S1SvImJ_T0092465.1 MGP_129S1SvImJ_G0034843.1 mouse_genomes_project 9 54656840 54660739 + MGP_129S1SvImJ_P0092465 Isl2 protein_coding protein_coding MGP_129S1SvImJ_T0092466.1 MGP_129S1SvImJ_G0034843.1 mouse_genomes_project 9 54659316 54664351 + MGP_129S1SvImJ_P0092466 Isl2 protein_coding protein_coding MGP_129S1SvImJ_T0092467.1 MGP_129S1SvImJ_G0034843.1 mouse_genomes_project 9 54659375 54664351 + MGP_129S1SvImJ_P0092467 Isl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092468.1 MGP_129S1SvImJ_G0034843.1 mouse_genomes_project 9 54659375 54664349 + MGP_129S1SvImJ_P0092468 Isl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092469.1 MGP_129S1SvImJ_G0034843.1 mouse_genomes_project 9 54660504 54662449 + Isl2 protein_coding retained_intron MGP_129S1SvImJ_T0092341.1 MGP_129S1SvImJ_G0034799.1 mouse_genomes_project 9 50193929 50202211 - MGP_129S1SvImJ_P0092341 Gm684 protein_coding protein_coding MGP_129S1SvImJ_T0016127.1 MGP_129S1SvImJ_G0014216.1 mouse_genomes_project 9 94034998 94035305 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091261.1 MGP_129S1SvImJ_G0034372.1 mouse_genomes_project 9 15342926 15423884 - MGP_129S1SvImJ_P0091261 Naalad2 protein_coding protein_coding MGP_129S1SvImJ_T0091262.1 MGP_129S1SvImJ_G0034372.1 mouse_genomes_project 9 15343995 15408334 - MGP_129S1SvImJ_P0091262 Naalad2 protein_coding protein_coding MGP_129S1SvImJ_T0091263.1 MGP_129S1SvImJ_G0034372.1 mouse_genomes_project 9 15343996 15415083 - MGP_129S1SvImJ_P0091263 Naalad2 protein_coding protein_coding MGP_129S1SvImJ_T0091264.1 MGP_129S1SvImJ_G0034372.1 mouse_genomes_project 9 15403075 15408220 - Naalad2 protein_coding retained_intron MGP_129S1SvImJ_T0091265.1 MGP_129S1SvImJ_G0034372.1 mouse_genomes_project 9 15407355 15429318 - MGP_129S1SvImJ_P0091265 Naalad2 protein_coding protein_coding MGP_129S1SvImJ_T0091266.1 MGP_129S1SvImJ_G0034372.1 mouse_genomes_project 9 15408126 15429320 - MGP_129S1SvImJ_P0091266 Naalad2 protein_coding protein_coding MGP_129S1SvImJ_T0091267.1 MGP_129S1SvImJ_G0034372.1 mouse_genomes_project 9 15410351 15429341 - MGP_129S1SvImJ_P0091267 Naalad2 protein_coding protein_coding MGP_129S1SvImJ_T0091268.1 MGP_129S1SvImJ_G0034372.1 mouse_genomes_project 9 15410457 15429322 - Naalad2 protein_coding processed_transcript MGP_129S1SvImJ_T0092214.1 MGP_129S1SvImJ_G0034757.1 mouse_genomes_project 9 47086006 47111190 - MGP_129S1SvImJ_P0092214 Nxpe2 protein_coding protein_coding MGP_129S1SvImJ_T0092215.1 MGP_129S1SvImJ_G0034757.1 mouse_genomes_project 9 47087144 47111126 - MGP_129S1SvImJ_P0092215 Nxpe2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092216.1 MGP_129S1SvImJ_G0034757.1 mouse_genomes_project 9 47095414 47123766 - MGP_129S1SvImJ_P0092216 Nxpe2 protein_coding protein_coding MGP_129S1SvImJ_T0092217.1 MGP_129S1SvImJ_G0034757.1 mouse_genomes_project 9 47100177 47111146 - Nxpe2 protein_coding processed_transcript MGP_129S1SvImJ_T0092218.1 MGP_129S1SvImJ_G0034757.1 mouse_genomes_project 9 47100505 47123766 - Nxpe2 protein_coding processed_transcript MGP_129S1SvImJ_T0100176.1 MGP_129S1SvImJ_G0038243.1 mouse_genomes_project 9 51753225 51753343 + Gm22242 snRNA snRNA MGP_129S1SvImJ_T0093252.1 MGP_129S1SvImJ_G0035044.1 mouse_genomes_project 9 75971123 76016477 - MGP_129S1SvImJ_P0093252 Scg3 protein_coding protein_coding MGP_129S1SvImJ_T0093309.1 MGP_129S1SvImJ_G0035058.1 mouse_genomes_project 9 78576462 78638140 + MGP_129S1SvImJ_P0093309 Ick protein_coding protein_coding MGP_129S1SvImJ_T0093310.1 MGP_129S1SvImJ_G0035058.1 mouse_genomes_project 9 78576505 78580700 + MGP_129S1SvImJ_P0093310 Ick protein_coding protein_coding MGP_129S1SvImJ_T0093311.1 MGP_129S1SvImJ_G0035058.1 mouse_genomes_project 9 78580113 78585737 + Ick protein_coding processed_transcript MGP_129S1SvImJ_T0093312.1 MGP_129S1SvImJ_G0035058.1 mouse_genomes_project 9 78580511 78601389 + Ick protein_coding retained_intron MGP_129S1SvImJ_T0093313.1 MGP_129S1SvImJ_G0035058.1 mouse_genomes_project 9 78580554 78592924 + MGP_129S1SvImJ_P0093313 Ick protein_coding protein_coding MGP_129S1SvImJ_T0093314.1 MGP_129S1SvImJ_G0035058.1 mouse_genomes_project 9 78580570 78635615 + MGP_129S1SvImJ_P0093314 Ick protein_coding protein_coding MGP_129S1SvImJ_T0093315.1 MGP_129S1SvImJ_G0035058.1 mouse_genomes_project 9 78580585 78642309 + MGP_129S1SvImJ_P0093315 Ick protein_coding protein_coding MGP_129S1SvImJ_T0093316.1 MGP_129S1SvImJ_G0035058.1 mouse_genomes_project 9 78623928 78640655 + Ick protein_coding retained_intron MGP_129S1SvImJ_T0018530.1 MGP_129S1SvImJ_G0015729.1 mouse_genomes_project 9 4856018 4867292 + Gm20416 processed_transcript processed_transcript MGP_129S1SvImJ_T0016120.1 MGP_129S1SvImJ_G0014209.1 mouse_genomes_project 9 91739405 91739568 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091070.1 MGP_129S1SvImJ_G0034309.1 mouse_genomes_project 9 1023000 1044893 + MGP_129S1SvImJ_P0091070 Kbtbd3 protein_coding protein_coding MGP_129S1SvImJ_T0093912.1 MGP_129S1SvImJ_G0035190.1 mouse_genomes_project 9 104317618 104336001 + MGP_129S1SvImJ_P0093912 Gm5627 protein_coding protein_coding MGP_129S1SvImJ_T0092603.1 MGP_129S1SvImJ_G0034887.1 mouse_genomes_project 9 57489246 57523254 - MGP_129S1SvImJ_P0092603 Pml protein_coding protein_coding MGP_129S1SvImJ_T0092604.1 MGP_129S1SvImJ_G0034887.1 mouse_genomes_project 9 57490153 57523350 - MGP_129S1SvImJ_P0092604 Pml protein_coding protein_coding MGP_129S1SvImJ_T0092605.1 MGP_129S1SvImJ_G0034887.1 mouse_genomes_project 9 57490619 57505584 - Pml protein_coding retained_intron MGP_129S1SvImJ_T0092606.1 MGP_129S1SvImJ_G0034887.1 mouse_genomes_project 9 57491828 57523224 - MGP_129S1SvImJ_P0092606 Pml protein_coding protein_coding MGP_129S1SvImJ_T0092607.1 MGP_129S1SvImJ_G0034887.1 mouse_genomes_project 9 57492340 57502326 - Pml protein_coding processed_transcript MGP_129S1SvImJ_T0092608.1 MGP_129S1SvImJ_G0034887.1 mouse_genomes_project 9 57493108 57523350 - MGP_129S1SvImJ_P0092608 Pml protein_coding protein_coding MGP_129S1SvImJ_T0092609.1 MGP_129S1SvImJ_G0034887.1 mouse_genomes_project 9 57502046 57523350 - MGP_129S1SvImJ_P0092609 Pml protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092610.1 MGP_129S1SvImJ_G0034887.1 mouse_genomes_project 9 57502589 57505594 - Pml protein_coding retained_intron MGP_129S1SvImJ_T0092611.1 MGP_129S1SvImJ_G0034887.1 mouse_genomes_project 9 57518846 57523187 - MGP_129S1SvImJ_P0092611 Pml protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092612.1 MGP_129S1SvImJ_G0034887.1 mouse_genomes_project 9 57518891 57523350 - MGP_129S1SvImJ_P0092612 Pml protein_coding protein_coding MGP_129S1SvImJ_T0101467.1 MGP_129S1SvImJ_G0039534.1 mouse_genomes_project 9 68438015 68438088 + Gm22962 snoRNA snoRNA MGP_129S1SvImJ_T0101985.1 MGP_129S1SvImJ_G0039855.1 mouse_genomes_project 9 100831005 100845731 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101986.1 MGP_129S1SvImJ_G0039855.1 mouse_genomes_project 9 100845219 100849520 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0002443.1 MGP_129S1SvImJ_G0002352.1 mouse_genomes_project 9 99217627 99219177 - TEC TEC MGP_129S1SvImJ_T0092721.1 MGP_129S1SvImJ_G0034916.1 mouse_genomes_project 9 61417868 61451101 - MGP_129S1SvImJ_P0092721 Kif23 protein_coding protein_coding MGP_129S1SvImJ_T0092722.1 MGP_129S1SvImJ_G0034916.1 mouse_genomes_project 9 61418248 61450924 - MGP_129S1SvImJ_P0092722 Kif23 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0011105.1 MGP_129S1SvImJ_G0009221.1 mouse_genomes_project 9 72677622 72677748 - Gm28010 miRNA miRNA MGP_129S1SvImJ_T0011762.1 MGP_129S1SvImJ_G0009878.1 mouse_genomes_project 9 90958054 90958322 + Gm23759 misc_RNA misc_RNA MGP_129S1SvImJ_T0002388.1 MGP_129S1SvImJ_G0002298.1 mouse_genomes_project 9 72081328 72083322 - TEC TEC MGP_129S1SvImJ_T0092047.1 MGP_129S1SvImJ_G0034713.1 mouse_genomes_project 9 43007476 43022747 - MGP_129S1SvImJ_P0092047 Cxcr5 protein_coding protein_coding MGP_129S1SvImJ_T0092048.1 MGP_129S1SvImJ_G0034713.1 mouse_genomes_project 9 43007476 43052567 - MGP_129S1SvImJ_P0092048 Cxcr5 protein_coding protein_coding MGP_129S1SvImJ_T0093496.1 MGP_129S1SvImJ_G0035097.1 mouse_genomes_project 9 87401634 87404377 + MGP_129S1SvImJ_P0093496 Rwdd2a protein_coding protein_coding MGP_129S1SvImJ_T0093497.1 MGP_129S1SvImJ_G0035097.1 mouse_genomes_project 9 87401659 87404543 + MGP_129S1SvImJ_P0093497 Rwdd2a protein_coding protein_coding MGP_129S1SvImJ_T0093498.1 MGP_129S1SvImJ_G0035097.1 mouse_genomes_project 9 87401696 87404484 + MGP_129S1SvImJ_P0093498 Rwdd2a protein_coding protein_coding MGP_129S1SvImJ_T0005566.1 MGP_129S1SvImJ_G0004697.1 mouse_genomes_project 9 111441818 111465233 + antisense antisense MGP_129S1SvImJ_T0009280.1 MGP_129S1SvImJ_G0007458.1 mouse_genomes_project 9 75111756 75155881 + Gm20649 lincRNA lincRNA MGP_129S1SvImJ_T0011068.1 MGP_129S1SvImJ_G0009184.1 mouse_genomes_project 9 18257795 18257887 - Mir7082 miRNA miRNA MGP_129S1SvImJ_T0093871.1 MGP_129S1SvImJ_G0035182.1 mouse_genomes_project 9 102587561 102739826 - MGP_129S1SvImJ_P0093871 Ppp2r3a protein_coding protein_coding MGP_129S1SvImJ_T0093872.1 MGP_129S1SvImJ_G0035182.1 mouse_genomes_project 9 102587763 102684375 - MGP_129S1SvImJ_P0093872 Ppp2r3a protein_coding protein_coding MGP_129S1SvImJ_T0093873.1 MGP_129S1SvImJ_G0035182.1 mouse_genomes_project 9 102590360 102609993 - Ppp2r3a protein_coding processed_transcript MGP_129S1SvImJ_T0093874.1 MGP_129S1SvImJ_G0035182.1 mouse_genomes_project 9 102609112 102684153 - Ppp2r3a protein_coding retained_intron MGP_129S1SvImJ_T0093875.1 MGP_129S1SvImJ_G0035182.1 mouse_genomes_project 9 102677908 102684307 - Ppp2r3a protein_coding retained_intron MGP_129S1SvImJ_T0093876.1 MGP_129S1SvImJ_G0035182.1 mouse_genomes_project 9 102682767 102686221 - Ppp2r3a protein_coding retained_intron MGP_129S1SvImJ_T0093877.1 MGP_129S1SvImJ_G0035182.1 mouse_genomes_project 9 102691865 102697512 - Ppp2r3a protein_coding processed_transcript MGP_129S1SvImJ_T0011130.1 MGP_129S1SvImJ_G0009246.1 mouse_genomes_project 9 117931225 117931423 - miRNA miRNA MGP_129S1SvImJ_T0005457.1 MGP_129S1SvImJ_G0004623.1 mouse_genomes_project 9 44449368 44450948 - Gm16536 antisense antisense MGP_129S1SvImJ_T0092255.1 MGP_129S1SvImJ_G0034777.1 mouse_genomes_project 9 49411629 49418981 - MGP_129S1SvImJ_P0092255 Pts protein_coding protein_coding MGP_129S1SvImJ_T0094024.1 MGP_129S1SvImJ_G0035214.1 mouse_genomes_project 9 107130268 107140152 + MGP_129S1SvImJ_P0094024 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0094025.1 MGP_129S1SvImJ_G0035214.1 mouse_genomes_project 9 107130283 107137030 + protein_coding retained_intron MGP_129S1SvImJ_T0094026.1 MGP_129S1SvImJ_G0035214.1 mouse_genomes_project 9 107130298 107140305 + protein_coding retained_intron MGP_129S1SvImJ_T0094027.1 MGP_129S1SvImJ_G0035214.1 mouse_genomes_project 9 107130427 107136500 + MGP_129S1SvImJ_P0094027 protein_coding protein_coding MGP_129S1SvImJ_T0094028.1 MGP_129S1SvImJ_G0035214.1 mouse_genomes_project 9 107132103 107140011 + MGP_129S1SvImJ_P0094028 protein_coding protein_coding MGP_129S1SvImJ_T0094029.1 MGP_129S1SvImJ_G0035214.1 mouse_genomes_project 9 107132701 107140166 + MGP_129S1SvImJ_P0094029 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094030.1 MGP_129S1SvImJ_G0035214.1 mouse_genomes_project 9 107132701 107145414 + MGP_129S1SvImJ_P0094030 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094031.1 MGP_129S1SvImJ_G0035214.1 mouse_genomes_project 9 107135677 107140166 + protein_coding processed_transcript MGP_129S1SvImJ_T0094032.1 MGP_129S1SvImJ_G0035214.1 mouse_genomes_project 9 107136361 107140596 + MGP_129S1SvImJ_P0094032 protein_coding protein_coding MGP_129S1SvImJ_T0092842.1 MGP_129S1SvImJ_G0034949.1 mouse_genomes_project 9 64804048 64842100 + MGP_129S1SvImJ_P0092842 Igdcc4 protein_coding protein_coding MGP_129S1SvImJ_T0092843.1 MGP_129S1SvImJ_G0034949.1 mouse_genomes_project 9 64804097 64839740 + MGP_129S1SvImJ_P0092843 Igdcc4 protein_coding protein_coding MGP_129S1SvImJ_T0016094.1 MGP_129S1SvImJ_G0014183.1 mouse_genomes_project 9 80380468 80380748 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0093298.1 MGP_129S1SvImJ_G0035055.1 mouse_genomes_project 9 78377626 78450580 + MGP_129S1SvImJ_P0093298 Elovl5 protein_coding protein_coding MGP_129S1SvImJ_T0093299.1 MGP_129S1SvImJ_G0035055.1 mouse_genomes_project 9 78377696 78420065 + Elovl5 protein_coding retained_intron MGP_129S1SvImJ_T0093300.1 MGP_129S1SvImJ_G0035055.1 mouse_genomes_project 9 78382849 78445909 + MGP_129S1SvImJ_P0093300 Elovl5 protein_coding protein_coding MGP_129S1SvImJ_T0093301.1 MGP_129S1SvImJ_G0035055.1 mouse_genomes_project 9 78402140 78423352 + MGP_129S1SvImJ_P0093301 Elovl5 protein_coding protein_coding MGP_129S1SvImJ_T0002435.1 MGP_129S1SvImJ_G0002344.1 mouse_genomes_project 9 92363085 92363825 - TEC TEC MGP_129S1SvImJ_T0092404.1 MGP_129S1SvImJ_G0034824.1 mouse_genomes_project 9 53580307 53586342 + MGP_129S1SvImJ_P0092404 Sh2d7 protein_coding protein_coding MGP_129S1SvImJ_T0092405.1 MGP_129S1SvImJ_G0034824.1 mouse_genomes_project 9 53580311 53584976 + MGP_129S1SvImJ_P0092405 Sh2d7 protein_coding protein_coding MGP_129S1SvImJ_T0002402.1 MGP_129S1SvImJ_G0002312.1 mouse_genomes_project 9 72906256 72910528 + TEC TEC MGP_129S1SvImJ_T0011056.1 MGP_129S1SvImJ_G0009172.1 mouse_genomes_project 9 1176003 1176087 - Gm23811 miRNA miRNA MGP_129S1SvImJ_T0016163.1 MGP_129S1SvImJ_G0014252.1 mouse_genomes_project 9 110098770 110099293 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016148.1 MGP_129S1SvImJ_G0014237.1 mouse_genomes_project 9 102534632 102534983 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091972.1 MGP_129S1SvImJ_G0034689.1 mouse_genomes_project 9 42517203 42548060 + MGP_129S1SvImJ_P0091972 Usp2 protein_coding protein_coding MGP_129S1SvImJ_T0091973.1 MGP_129S1SvImJ_G0034689.1 mouse_genomes_project 9 42517260 42546401 + MGP_129S1SvImJ_P0091973 Usp2 protein_coding protein_coding MGP_129S1SvImJ_T0091974.1 MGP_129S1SvImJ_G0034689.1 mouse_genomes_project 9 42519625 42546426 + MGP_129S1SvImJ_P0091974 Usp2 protein_coding protein_coding MGP_129S1SvImJ_T0091975.1 MGP_129S1SvImJ_G0034689.1 mouse_genomes_project 9 42522381 42526100 + MGP_129S1SvImJ_P0091975 Usp2 protein_coding protein_coding MGP_129S1SvImJ_T0091976.1 MGP_129S1SvImJ_G0034689.1 mouse_genomes_project 9 42536089 42546398 + MGP_129S1SvImJ_P0091976 Usp2 protein_coding protein_coding MGP_129S1SvImJ_T0091977.1 MGP_129S1SvImJ_G0034689.1 mouse_genomes_project 9 42536090 42546911 + MGP_129S1SvImJ_P0091977 Usp2 protein_coding protein_coding MGP_129S1SvImJ_T0091978.1 MGP_129S1SvImJ_G0034689.1 mouse_genomes_project 9 42539662 42544972 + MGP_129S1SvImJ_P0091978 Usp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091979.1 MGP_129S1SvImJ_G0034689.1 mouse_genomes_project 9 42544939 42546797 + Usp2 protein_coding processed_transcript MGP_129S1SvImJ_T0091980.1 MGP_129S1SvImJ_G0034689.1 mouse_genomes_project 9 42545145 42546405 + Usp2 protein_coding processed_transcript MGP_129S1SvImJ_T0091684.1 MGP_129S1SvImJ_G0034535.1 mouse_genomes_project 9 33231300 33265644 + MGP_129S1SvImJ_P0091684 Cdon protein_coding protein_coding MGP_129S1SvImJ_T0091685.1 MGP_129S1SvImJ_G0034535.1 mouse_genomes_project 9 33231726 33265619 + MGP_129S1SvImJ_P0091685 Cdon protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091686.1 MGP_129S1SvImJ_G0034535.1 mouse_genomes_project 9 33231769 33320746 + MGP_129S1SvImJ_P0091686 Cdon protein_coding protein_coding MGP_129S1SvImJ_T0091687.1 MGP_129S1SvImJ_G0034535.1 mouse_genomes_project 9 33233767 33284426 + MGP_129S1SvImJ_P0091687 Cdon protein_coding protein_coding MGP_129S1SvImJ_T0091688.1 MGP_129S1SvImJ_G0034535.1 mouse_genomes_project 9 33262352 33320745 + MGP_129S1SvImJ_P0091688 Cdon protein_coding protein_coding MGP_129S1SvImJ_T0091689.1 MGP_129S1SvImJ_G0034535.1 mouse_genomes_project 9 33267722 33283355 + MGP_129S1SvImJ_P0091689 Cdon protein_coding protein_coding MGP_129S1SvImJ_T0005513.1 MGP_129S1SvImJ_G0004660.1 mouse_genomes_project 9 96745339 96778078 - Gm16126 antisense antisense MGP_129S1SvImJ_T0009347.1 MGP_129S1SvImJ_G0007510.1 mouse_genomes_project 9 112429763 112434712 - Gm42775 lincRNA lincRNA MGP_129S1SvImJ_T0009335.1 MGP_129S1SvImJ_G0007502.1 mouse_genomes_project 9 107902230 107903402 - Gm29208 lincRNA lincRNA MGP_129S1SvImJ_T0091313.1 MGP_129S1SvImJ_G0034412.1 mouse_genomes_project 9 17279374 17281342 - MGP_129S1SvImJ_P0091313 protein_coding protein_coding MGP_129S1SvImJ_T0095352.1 MGP_129S1SvImJ_G0035474.1 mouse_genomes_project 9 126196799 126234958 - MGP_129S1SvImJ_P0095352 Cdcp1 protein_coding protein_coding MGP_129S1SvImJ_T0095353.1 MGP_129S1SvImJ_G0035474.1 mouse_genomes_project 9 126199032 126204028 - Cdcp1 protein_coding retained_intron MGP_129S1SvImJ_T0095354.1 MGP_129S1SvImJ_G0035474.1 mouse_genomes_project 9 126206603 126234919 - Cdcp1 protein_coding retained_intron MGP_129S1SvImJ_T0095191.1 MGP_129S1SvImJ_G0035421.1 mouse_genomes_project 9 122266253 122350273 - MGP_129S1SvImJ_P0095191 Scn5a protein_coding protein_coding MGP_129S1SvImJ_T0095192.1 MGP_129S1SvImJ_G0035421.1 mouse_genomes_project 9 122266255 122366620 - MGP_129S1SvImJ_P0095192 Scn5a protein_coding protein_coding MGP_129S1SvImJ_T0095193.1 MGP_129S1SvImJ_G0035421.1 mouse_genomes_project 9 122267169 122366620 - MGP_129S1SvImJ_P0095193 Scn5a protein_coding protein_coding MGP_129S1SvImJ_T0095194.1 MGP_129S1SvImJ_G0035421.1 mouse_genomes_project 9 122268423 122350219 - MGP_129S1SvImJ_P0095194 Scn5a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0095195.1 MGP_129S1SvImJ_G0035421.1 mouse_genomes_project 9 122268423 122350219 - MGP_129S1SvImJ_P0095195 Scn5a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0095196.1 MGP_129S1SvImJ_G0035421.1 mouse_genomes_project 9 122350131 122351098 - MGP_129S1SvImJ_P0095196 Scn5a protein_coding protein_coding MGP_129S1SvImJ_T0095085.1 MGP_129S1SvImJ_G0035394.1 mouse_genomes_project 9 117218588 117243569 - MGP_129S1SvImJ_P0095085 Cmtm7 protein_coding protein_coding MGP_129S1SvImJ_T0095086.1 MGP_129S1SvImJ_G0035394.1 mouse_genomes_project 9 117218588 117243569 - MGP_129S1SvImJ_P0095086 Cmtm7 protein_coding protein_coding MGP_129S1SvImJ_T0100208.1 MGP_129S1SvImJ_G0038275.1 mouse_genomes_project 9 97091442 97091620 + Gm24004 snRNA snRNA MGP_129S1SvImJ_T0016115.1 MGP_129S1SvImJ_G0014204.1 mouse_genomes_project 9 90959990 90960637 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091535.1 MGP_129S1SvImJ_G0034495.1 mouse_genomes_project 9 22107450 22163716 - MGP_129S1SvImJ_P0091535 Tbx20 protein_coding protein_coding MGP_129S1SvImJ_T0091536.1 MGP_129S1SvImJ_G0034495.1 mouse_genomes_project 9 22127847 22163716 - MGP_129S1SvImJ_P0091536 Tbx20 protein_coding protein_coding MGP_129S1SvImJ_T0091295.1 MGP_129S1SvImJ_G0034394.1 mouse_genomes_project 9 16520534 16521482 - MGP_129S1SvImJ_P0091295 Olfr850 protein_coding protein_coding MGP_129S1SvImJ_T0005584.1 MGP_129S1SvImJ_G0004711.1 mouse_genomes_project 9 126691987 126693925 + Gm17120 antisense antisense MGP_129S1SvImJ_T0100159.1 MGP_129S1SvImJ_G0038226.1 mouse_genomes_project 9 17362535 17362631 - Gm25425 snRNA snRNA MGP_129S1SvImJ_T0093010.1 MGP_129S1SvImJ_G0034993.1 mouse_genomes_project 9 69768159 69771385 - MGP_129S1SvImJ_P0093010 Foxb1 protein_coding protein_coding MGP_129S1SvImJ_T0091930.1 MGP_129S1SvImJ_G0034671.1 mouse_genomes_project 9 39125937 39129827 + MGP_129S1SvImJ_P0091930 Bsx protein_coding protein_coding MGP_129S1SvImJ_T0091879.1 MGP_129S1SvImJ_G0034640.1 mouse_genomes_project 9 37781354 37782417 + MGP_129S1SvImJ_P0091879 Olfr961 protein_coding protein_coding MGP_129S1SvImJ_T0091305.1 MGP_129S1SvImJ_G0034404.1 mouse_genomes_project 9 17023662 17029044 + MGP_129S1SvImJ_P0091305 Olfr77 protein_coding protein_coding MGP_129S1SvImJ_T0093067.1 MGP_129S1SvImJ_G0035009.1 mouse_genomes_project 9 71597952 71714620 - MGP_129S1SvImJ_P0093067 Gcom1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093068.1 MGP_129S1SvImJ_G0035009.1 mouse_genomes_project 9 71597952 71714620 - MGP_129S1SvImJ_P0093068 Gcom1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093069.1 MGP_129S1SvImJ_G0035009.1 mouse_genomes_project 9 71597952 71714620 - MGP_129S1SvImJ_P0093069 Gcom1 protein_coding protein_coding MGP_129S1SvImJ_T0093070.1 MGP_129S1SvImJ_G0035009.1 mouse_genomes_project 9 71597952 71714620 - MGP_129S1SvImJ_P0093070 Gcom1 protein_coding protein_coding MGP_129S1SvImJ_T0094405.1 MGP_129S1SvImJ_G0035275.1 mouse_genomes_project 9 109865076 109886463 + Traip protein_coding retained_intron MGP_129S1SvImJ_T0094406.1 MGP_129S1SvImJ_G0035275.1 mouse_genomes_project 9 109865896 109887208 + MGP_129S1SvImJ_P0094406 Traip protein_coding protein_coding MGP_129S1SvImJ_T0094407.1 MGP_129S1SvImJ_G0035275.1 mouse_genomes_project 9 109865907 109873426 + Traip protein_coding processed_transcript MGP_129S1SvImJ_T0094408.1 MGP_129S1SvImJ_G0035275.1 mouse_genomes_project 9 109865928 109875984 + MGP_129S1SvImJ_P0094408 Traip protein_coding protein_coding MGP_129S1SvImJ_T0094409.1 MGP_129S1SvImJ_G0035275.1 mouse_genomes_project 9 109875329 109876600 + Traip protein_coding processed_transcript MGP_129S1SvImJ_T0094410.1 MGP_129S1SvImJ_G0035275.1 mouse_genomes_project 9 109877110 109883582 + Traip protein_coding retained_intron MGP_129S1SvImJ_T0094411.1 MGP_129S1SvImJ_G0035275.1 mouse_genomes_project 9 109877171 109883679 + Traip protein_coding retained_intron MGP_129S1SvImJ_T0091463.1 MGP_129S1SvImJ_G0034464.1 mouse_genomes_project 9 19100462 19102299 + MGP_129S1SvImJ_P0091463 Angptl8 protein_coding protein_coding MGP_129S1SvImJ_T0093785.1 MGP_129S1SvImJ_G0035165.1 mouse_genomes_project 9 100379511 100496710 - MGP_129S1SvImJ_P0093785 Pik3cb protein_coding unknown_likely_coding MGP_129S1SvImJ_T0093786.1 MGP_129S1SvImJ_G0035165.1 mouse_genomes_project 9 100379522 100496663 - MGP_129S1SvImJ_P0093786 Pik3cb protein_coding protein_coding MGP_129S1SvImJ_T0093787.1 MGP_129S1SvImJ_G0035165.1 mouse_genomes_project 9 100381269 100496501 - MGP_129S1SvImJ_P0093787 Pik3cb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093788.1 MGP_129S1SvImJ_G0035165.1 mouse_genomes_project 9 100453171 100497197 - MGP_129S1SvImJ_P0093788 Pik3cb protein_coding protein_coding MGP_129S1SvImJ_T0091863.1 MGP_129S1SvImJ_G0034630.1 mouse_genomes_project 9 37346048 37347011 - MGP_129S1SvImJ_P0091863 Olfr945 protein_coding protein_coding MGP_129S1SvImJ_T0095078.1 MGP_129S1SvImJ_G0035387.1 mouse_genomes_project 9 116816421 116830659 + MGP_129S1SvImJ_P0095078 Tmppe protein_coding protein_coding MGP_129S1SvImJ_T0091698.1 MGP_129S1SvImJ_G0034540.1 mouse_genomes_project 9 33423091 33431736 - MGP_129S1SvImJ_P0091698 Pate4 protein_coding protein_coding MGP_129S1SvImJ_T0093321.1 MGP_129S1SvImJ_G0035063.1 mouse_genomes_project 9 78747648 78762143 + MGP_129S1SvImJ_P0093321 protein_coding protein_coding MGP_129S1SvImJ_T0093325.1 MGP_129S1SvImJ_G0035063.1 mouse_genomes_project 9 78752280 78762054 + protein_coding retained_intron MGP_129S1SvImJ_T0093431.1 MGP_129S1SvImJ_G0035086.1 mouse_genomes_project 9 84059917 84099258 - MGP_129S1SvImJ_P0093431 Lca5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093432.1 MGP_129S1SvImJ_G0035086.1 mouse_genomes_project 9 84061004 84114787 - MGP_129S1SvImJ_P0093432 Lca5 protein_coding protein_coding MGP_129S1SvImJ_T0093433.1 MGP_129S1SvImJ_G0035086.1 mouse_genomes_project 9 84063059 84114687 - MGP_129S1SvImJ_P0093433 Lca5 protein_coding protein_coding MGP_129S1SvImJ_T0093434.1 MGP_129S1SvImJ_G0035086.1 mouse_genomes_project 9 84070550 84071785 - Lca5 protein_coding retained_intron MGP_129S1SvImJ_T0093435.1 MGP_129S1SvImJ_G0035086.1 mouse_genomes_project 9 84094543 84114753 - Lca5 protein_coding retained_intron MGP_129S1SvImJ_T0093436.1 MGP_129S1SvImJ_G0035086.1 mouse_genomes_project 9 84095519 84106997 - MGP_129S1SvImJ_P0093436 Lca5 protein_coding protein_coding MGP_129S1SvImJ_T0093437.1 MGP_129S1SvImJ_G0035086.1 mouse_genomes_project 9 84095724 84099266 - Lca5 protein_coding retained_intron MGP_129S1SvImJ_T0093438.1 MGP_129S1SvImJ_G0035086.1 mouse_genomes_project 9 84099045 84114776 - MGP_129S1SvImJ_P0093438 Lca5 protein_coding protein_coding MGP_129S1SvImJ_T0093439.1 MGP_129S1SvImJ_G0035086.1 mouse_genomes_project 9 84099136 84114722 - Lca5 protein_coding processed_transcript MGP_129S1SvImJ_T0100171.1 MGP_129S1SvImJ_G0038238.1 mouse_genomes_project 9 44472112 44472211 - Gm24646 snRNA snRNA MGP_129S1SvImJ_T0091862.1 MGP_129S1SvImJ_G0034629.1 mouse_genomes_project 9 37323971 37324916 - MGP_129S1SvImJ_P0091862 Olfr1537 protein_coding protein_coding MGP_129S1SvImJ_T0011091.1 MGP_129S1SvImJ_G0009207.1 mouse_genomes_project 9 53767357 53767424 + Mir5710 miRNA miRNA MGP_129S1SvImJ_T0091882.1 MGP_129S1SvImJ_G0034643.1 mouse_genomes_project 9 37864565 37865504 + MGP_129S1SvImJ_P0091882 Olfr965 protein_coding protein_coding MGP_129S1SvImJ_T0009307.1 MGP_129S1SvImJ_G0007480.1 mouse_genomes_project 9 93352015 93355820 - Gm29139 lincRNA lincRNA MGP_129S1SvImJ_T0092043.1 MGP_129S1SvImJ_G0034709.1 mouse_genomes_project 9 42896460 42905681 - MGP_129S1SvImJ_P0092043 Ccdc84 protein_coding protein_coding MGP_129S1SvImJ_T0092911.1 MGP_129S1SvImJ_G0034971.1 mouse_genomes_project 9 65868007 65872563 - MGP_129S1SvImJ_P0092911 Snx22 protein_coding protein_coding MGP_129S1SvImJ_T0091567.1 MGP_129S1SvImJ_G0034507.1 mouse_genomes_project 9 24561041 24622967 - MGP_129S1SvImJ_P0091567 Jam3 protein_coding protein_coding MGP_129S1SvImJ_T0091568.1 MGP_129S1SvImJ_G0034507.1 mouse_genomes_project 9 24564324 24622964 - MGP_129S1SvImJ_P0091568 Jam3 protein_coding protein_coding MGP_129S1SvImJ_T0091807.1 MGP_129S1SvImJ_G0034581.1 mouse_genomes_project 9 36091710 36093283 + MGP_129S1SvImJ_P0091807 Olfr884 protein_coding protein_coding MGP_129S1SvImJ_T0091808.1 MGP_129S1SvImJ_G0034581.1 mouse_genomes_project 9 36092353 36093283 + MGP_129S1SvImJ_P0091808 Olfr884 protein_coding protein_coding MGP_129S1SvImJ_T0091537.1 MGP_129S1SvImJ_G0034496.1 mouse_genomes_project 9 22517878 22566083 - MGP_129S1SvImJ_P0091537 Herpud2 protein_coding protein_coding MGP_129S1SvImJ_T0091680.1 MGP_129S1SvImJ_G0034534.1 mouse_genomes_project 9 33075950 33084008 + MGP_129S1SvImJ_P0091680 Rpusd4 protein_coding protein_coding MGP_129S1SvImJ_T0091681.1 MGP_129S1SvImJ_G0034534.1 mouse_genomes_project 9 33080382 33083253 + Rpusd4 protein_coding retained_intron MGP_129S1SvImJ_T0091682.1 MGP_129S1SvImJ_G0034534.1 mouse_genomes_project 9 33080738 33081853 + Rpusd4 protein_coding retained_intron MGP_129S1SvImJ_T0091683.1 MGP_129S1SvImJ_G0034534.1 mouse_genomes_project 9 33083239 33085751 + MGP_129S1SvImJ_P0091683 Rpusd4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0005564.1 MGP_129S1SvImJ_G0004695.1 mouse_genomes_project 9 110285644 110288575 - antisense antisense MGP_129S1SvImJ_T0092042.1 MGP_129S1SvImJ_G0034708.1 mouse_genomes_project 9 42893999 42896706 + MGP_129S1SvImJ_P0092042 Rps25 protein_coding protein_coding MGP_129S1SvImJ_T0101477.1 MGP_129S1SvImJ_G0039544.1 mouse_genomes_project 9 87549847 87549975 + Gm22138 snoRNA snoRNA MGP_129S1SvImJ_T0093740.1 MGP_129S1SvImJ_G0035148.1 mouse_genomes_project 9 98185581 98262253 - MGP_129S1SvImJ_P0093740 Spsb4 protein_coding protein_coding MGP_129S1SvImJ_T0093741.1 MGP_129S1SvImJ_G0035148.1 mouse_genomes_project 9 98185584 98227647 - Spsb4 protein_coding processed_transcript MGP_129S1SvImJ_T0093742.1 MGP_129S1SvImJ_G0035148.1 mouse_genomes_project 9 98186071 98215425 - Spsb4 protein_coding processed_transcript MGP_129S1SvImJ_T0093743.1 MGP_129S1SvImJ_G0035148.1 mouse_genomes_project 9 98237494 98262174 - Spsb4 protein_coding retained_intron MGP_129S1SvImJ_T0091504.1 MGP_129S1SvImJ_G0034484.1 mouse_genomes_project 9 19574301 19606836 - MGP_129S1SvImJ_P0091504 Zfp810 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0092571.1 MGP_129S1SvImJ_G0034882.1 mouse_genomes_project 9 57264600 57284789 + MGP_129S1SvImJ_P0092571 Cyp11a1 protein_coding protein_coding MGP_129S1SvImJ_T0092572.1 MGP_129S1SvImJ_G0034882.1 mouse_genomes_project 9 57275339 57292459 + MGP_129S1SvImJ_P0092572 Cyp11a1 protein_coding protein_coding MGP_129S1SvImJ_T0092573.1 MGP_129S1SvImJ_G0034882.1 mouse_genomes_project 9 57275665 57286433 + Cyp11a1 protein_coding retained_intron MGP_129S1SvImJ_T0092574.1 MGP_129S1SvImJ_G0034882.1 mouse_genomes_project 9 57281442 57290679 + MGP_129S1SvImJ_P0092574 Cyp11a1 protein_coding protein_coding MGP_129S1SvImJ_T0100167.1 MGP_129S1SvImJ_G0038234.1 mouse_genomes_project 9 42339260 42339365 - Gm23326 snRNA snRNA MGP_129S1SvImJ_T0016062.1 MGP_129S1SvImJ_G0014151.1 mouse_genomes_project 9 59224916 59225193 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091804.1 MGP_129S1SvImJ_G0034578.1 mouse_genomes_project 9 35947368 35948433 + MGP_129S1SvImJ_P0091804 Olfr878 protein_coding protein_coding MGP_129S1SvImJ_T0011752.1 MGP_129S1SvImJ_G0009868.1 mouse_genomes_project 9 15598220 15598526 + Gm25295 misc_RNA misc_RNA MGP_129S1SvImJ_T0093208.1 MGP_129S1SvImJ_G0035033.1 mouse_genomes_project 9 75315614 75341140 + MGP_129S1SvImJ_P0093208 Arpp19 protein_coding protein_coding MGP_129S1SvImJ_T0093209.1 MGP_129S1SvImJ_G0035033.1 mouse_genomes_project 9 75315614 75341121 + MGP_129S1SvImJ_P0093209 Arpp19 protein_coding protein_coding MGP_129S1SvImJ_T0093210.1 MGP_129S1SvImJ_G0035033.1 mouse_genomes_project 9 75315677 75316474 + Arpp19 protein_coding retained_intron MGP_129S1SvImJ_T0093211.1 MGP_129S1SvImJ_G0035033.1 mouse_genomes_project 9 75315677 75337665 + MGP_129S1SvImJ_P0093211 Arpp19 protein_coding protein_coding MGP_129S1SvImJ_T0093212.1 MGP_129S1SvImJ_G0035033.1 mouse_genomes_project 9 75315679 75338537 + MGP_129S1SvImJ_P0093212 Arpp19 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093213.1 MGP_129S1SvImJ_G0035033.1 mouse_genomes_project 9 75315718 75341140 + MGP_129S1SvImJ_P0093213 Arpp19 protein_coding protein_coding MGP_129S1SvImJ_T0093214.1 MGP_129S1SvImJ_G0035033.1 mouse_genomes_project 9 75315749 75337720 + MGP_129S1SvImJ_P0093214 Arpp19 protein_coding protein_coding MGP_129S1SvImJ_T0093215.1 MGP_129S1SvImJ_G0035033.1 mouse_genomes_project 9 75315819 75337649 + MGP_129S1SvImJ_P0093215 Arpp19 protein_coding protein_coding MGP_129S1SvImJ_T0093216.1 MGP_129S1SvImJ_G0035033.1 mouse_genomes_project 9 75315917 75337632 + MGP_129S1SvImJ_P0093216 Arpp19 protein_coding protein_coding MGP_129S1SvImJ_T0093217.1 MGP_129S1SvImJ_G0035033.1 mouse_genomes_project 9 75331049 75338210 + MGP_129S1SvImJ_P0093217 Arpp19 protein_coding protein_coding MGP_129S1SvImJ_T0093218.1 MGP_129S1SvImJ_G0035033.1 mouse_genomes_project 9 75331123 75338903 + MGP_129S1SvImJ_P0093218 Arpp19 protein_coding protein_coding MGP_129S1SvImJ_T0091287.1 MGP_129S1SvImJ_G0034386.1 mouse_genomes_project 9 16099616 16100552 + MGP_129S1SvImJ_P0091287 Olfr835 protein_coding protein_coding MGP_129S1SvImJ_T0095230.1 MGP_129S1SvImJ_G0035438.1 mouse_genomes_project 9 123442284 123443011 + MGP_129S1SvImJ_P0095230 5830454E08Rik protein_coding protein_coding MGP_129S1SvImJ_T0018574.1 MGP_129S1SvImJ_G0015743.1 mouse_genomes_project 9 72553280 72566055 + Gm27230 processed_transcript lincRNA MGP_129S1SvImJ_T0018575.1 MGP_129S1SvImJ_G0015743.1 mouse_genomes_project 9 72553286 72564294 + Gm27230 processed_transcript lincRNA MGP_129S1SvImJ_T0018576.1 MGP_129S1SvImJ_G0015743.1 mouse_genomes_project 9 72564962 72565636 + Gm27230 processed_transcript retained_intron MGP_129S1SvImJ_T0092540.1 MGP_129S1SvImJ_G0034867.1 mouse_genomes_project 9 56733660 56746119 + MGP_129S1SvImJ_P0092540 Cox5a protein_coding protein_coding MGP_129S1SvImJ_T0094918.1 MGP_129S1SvImJ_G0035353.1 mouse_genomes_project 9 112822302 112883616 + MGP_129S1SvImJ_P0094918 Ccdc12 protein_coding protein_coding MGP_129S1SvImJ_T0094919.1 MGP_129S1SvImJ_G0035353.1 mouse_genomes_project 9 112822324 112823478 + Ccdc12 protein_coding retained_intron MGP_129S1SvImJ_T0094920.1 MGP_129S1SvImJ_G0035353.1 mouse_genomes_project 9 112822329 112873239 + Ccdc12 protein_coding retained_intron MGP_129S1SvImJ_T0094921.1 MGP_129S1SvImJ_G0035353.1 mouse_genomes_project 9 112822337 112883265 + MGP_129S1SvImJ_P0094921 Ccdc12 protein_coding protein_coding MGP_129S1SvImJ_T0094922.1 MGP_129S1SvImJ_G0035353.1 mouse_genomes_project 9 112822341 112880747 + Ccdc12 protein_coding retained_intron MGP_129S1SvImJ_T0094923.1 MGP_129S1SvImJ_G0035353.1 mouse_genomes_project 9 112822411 112883523 + Ccdc12 protein_coding processed_transcript MGP_129S1SvImJ_T0094924.1 MGP_129S1SvImJ_G0035353.1 mouse_genomes_project 9 112833458 112883295 + Ccdc12 protein_coding processed_transcript MGP_129S1SvImJ_T0094925.1 MGP_129S1SvImJ_G0035353.1 mouse_genomes_project 9 112881903 112883597 + MGP_129S1SvImJ_P0094925 Ccdc12 protein_coding protein_coding MGP_129S1SvImJ_T0094926.1 MGP_129S1SvImJ_G0035353.1 mouse_genomes_project 9 112882020 112883603 + Ccdc12 protein_coding retained_intron MGP_129S1SvImJ_T0094927.1 MGP_129S1SvImJ_G0035353.1 mouse_genomes_project 9 112882053 112883474 + Ccdc12 protein_coding retained_intron MGP_129S1SvImJ_T0095065.1 MGP_129S1SvImJ_G0035381.1 mouse_genomes_project 9 116318127 116369241 + MGP_129S1SvImJ_P0095065 Ubp1 protein_coding protein_coding MGP_129S1SvImJ_T0095066.1 MGP_129S1SvImJ_G0035381.1 mouse_genomes_project 9 116318127 116369241 + MGP_129S1SvImJ_P0095066 Ubp1 protein_coding protein_coding MGP_129S1SvImJ_T0095067.1 MGP_129S1SvImJ_G0035381.1 mouse_genomes_project 9 116320813 116368857 + MGP_129S1SvImJ_P0095067 Ubp1 protein_coding protein_coding MGP_129S1SvImJ_T0002467.1 MGP_129S1SvImJ_G0002376.1 mouse_genomes_project 9 105170149 105172299 - TEC TEC MGP_129S1SvImJ_T0011059.1 MGP_129S1SvImJ_G0009175.1 mouse_genomes_project 9 6560165 6560266 - Gm26195 miRNA miRNA MGP_129S1SvImJ_T0002454.1 MGP_129S1SvImJ_G0002363.1 mouse_genomes_project 9 102600297 102605771 + TEC TEC MGP_129S1SvImJ_T0093159.1 MGP_129S1SvImJ_G0035020.1 mouse_genomes_project 9 73160962 73175421 + MGP_129S1SvImJ_P0093159 Dyx1c1 protein_coding protein_coding MGP_129S1SvImJ_T0093160.1 MGP_129S1SvImJ_G0035020.1 mouse_genomes_project 9 73160962 73175424 + MGP_129S1SvImJ_P0093160 Dyx1c1 protein_coding protein_coding MGP_129S1SvImJ_T0009299.1 MGP_129S1SvImJ_G0007474.1 mouse_genomes_project 9 90730309 90733503 + 1700017I07Rik lincRNA lincRNA MGP_129S1SvImJ_T0009306.1 MGP_129S1SvImJ_G0007479.1 mouse_genomes_project 9 92420263 92602035 + Gm29478 lincRNA lincRNA MGP_129S1SvImJ_T0091924.1 MGP_129S1SvImJ_G0034668.1 mouse_genomes_project 9 38896361 38896763 + MGP_129S1SvImJ_P0091924 Gm21915 protein_coding protein_coding MGP_129S1SvImJ_T0009240.1 MGP_129S1SvImJ_G0007426.1 mouse_genomes_project 9 39460584 39482395 + lincRNA lincRNA MGP_129S1SvImJ_T0091797.1 MGP_129S1SvImJ_G0034572.1 mouse_genomes_project 9 35666197 35675427 - MGP_129S1SvImJ_P0091797 Panx3 protein_coding protein_coding MGP_129S1SvImJ_T0091798.1 MGP_129S1SvImJ_G0034572.1 mouse_genomes_project 9 35670434 35675378 - MGP_129S1SvImJ_P0091798 Panx3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092550.1 MGP_129S1SvImJ_G0034873.1 mouse_genomes_project 9 56827080 56844401 - MGP_129S1SvImJ_P0092550 Lman1l protein_coding protein_coding MGP_129S1SvImJ_T0092551.1 MGP_129S1SvImJ_G0034873.1 mouse_genomes_project 9 56827080 56844401 - MGP_129S1SvImJ_P0092551 Lman1l protein_coding protein_coding MGP_129S1SvImJ_T0091637.1 MGP_129S1SvImJ_G0034527.1 mouse_genomes_project 9 32284362 32287633 + MGP_129S1SvImJ_P0091637 Kirrel3 protein_coding protein_coding MGP_129S1SvImJ_T0091638.1 MGP_129S1SvImJ_G0034527.1 mouse_genomes_project 9 32284593 32309015 + Kirrel3 protein_coding processed_transcript MGP_129S1SvImJ_T0091639.1 MGP_129S1SvImJ_G0034527.1 mouse_genomes_project 9 32284594 32849184 + MGP_129S1SvImJ_P0091639 Kirrel3 protein_coding protein_coding MGP_129S1SvImJ_T0091640.1 MGP_129S1SvImJ_G0034527.1 mouse_genomes_project 9 32287207 32850620 + MGP_129S1SvImJ_P0091640 Kirrel3 protein_coding protein_coding MGP_129S1SvImJ_T0091641.1 MGP_129S1SvImJ_G0034527.1 mouse_genomes_project 9 32287269 32850620 + MGP_129S1SvImJ_P0091641 Kirrel3 protein_coding protein_coding MGP_129S1SvImJ_T0091642.1 MGP_129S1SvImJ_G0034527.1 mouse_genomes_project 9 32287269 32844816 + MGP_129S1SvImJ_P0091642 Kirrel3 protein_coding protein_coding MGP_129S1SvImJ_T0091643.1 MGP_129S1SvImJ_G0034527.1 mouse_genomes_project 9 32287302 32850214 + MGP_129S1SvImJ_P0091643 Kirrel3 protein_coding protein_coding MGP_129S1SvImJ_T0091644.1 MGP_129S1SvImJ_G0034527.1 mouse_genomes_project 9 32287410 32850214 + MGP_129S1SvImJ_P0091644 Kirrel3 protein_coding protein_coding MGP_129S1SvImJ_T0091645.1 MGP_129S1SvImJ_G0034527.1 mouse_genomes_project 9 32830371 32844814 + MGP_129S1SvImJ_P0091645 Kirrel3 protein_coding protein_coding MGP_129S1SvImJ_T0101436.1 MGP_129S1SvImJ_G0039503.1 mouse_genomes_project 9 12309570 12309646 - Gm24339 snoRNA snoRNA MGP_129S1SvImJ_T0018607.1 MGP_129S1SvImJ_G0015756.1 mouse_genomes_project 9 100279892 100285398 - Foxl2os processed_transcript lincRNA MGP_129S1SvImJ_T0018608.1 MGP_129S1SvImJ_G0015756.1 mouse_genomes_project 9 100283888 100284383 - Foxl2os processed_transcript retained_intron MGP_129S1SvImJ_T0018609.1 MGP_129S1SvImJ_G0015756.1 mouse_genomes_project 9 100283970 100284897 - Foxl2os processed_transcript retained_intron MGP_129S1SvImJ_T0100193.1 MGP_129S1SvImJ_G0038260.1 mouse_genomes_project 9 72804789 72804896 + Gm23057 snRNA snRNA MGP_129S1SvImJ_T0093631.1 MGP_129S1SvImJ_G0035129.1 mouse_genomes_project 9 93508161 93547308 + MGP_129S1SvImJ_P0093631 Plscr4 protein_coding protein_coding MGP_129S1SvImJ_T0093632.1 MGP_129S1SvImJ_G0035129.1 mouse_genomes_project 9 93508182 93540215 + Plscr4 protein_coding retained_intron MGP_129S1SvImJ_T0091861.1 MGP_129S1SvImJ_G0034628.1 mouse_genomes_project 9 37303571 37304507 + MGP_129S1SvImJ_P0091861 Olfr944 protein_coding protein_coding MGP_129S1SvImJ_T0091983.1 MGP_129S1SvImJ_G0034691.1 mouse_genomes_project 9 42555660 42563122 + MGP_129S1SvImJ_P0091983 Mfrp protein_coding protein_coding MGP_129S1SvImJ_T0091984.1 MGP_129S1SvImJ_G0034691.1 mouse_genomes_project 9 42555669 42560460 + MGP_129S1SvImJ_P0091984 Mfrp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091985.1 MGP_129S1SvImJ_G0034691.1 mouse_genomes_project 9 42555685 42563119 + MGP_129S1SvImJ_P0091985 Mfrp protein_coding protein_coding MGP_129S1SvImJ_T0091986.1 MGP_129S1SvImJ_G0034691.1 mouse_genomes_project 9 42555701 42563119 + MGP_129S1SvImJ_P0091986 Mfrp protein_coding protein_coding MGP_129S1SvImJ_T0091987.1 MGP_129S1SvImJ_G0034691.1 mouse_genomes_project 9 42555719 42557238 + MGP_129S1SvImJ_P0091987 Mfrp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091988.1 MGP_129S1SvImJ_G0034691.1 mouse_genomes_project 9 42559116 42560362 + MGP_129S1SvImJ_P0091988 Mfrp protein_coding protein_coding MGP_129S1SvImJ_T0002447.1 MGP_129S1SvImJ_G0002356.1 mouse_genomes_project 9 100672569 100675438 + TEC TEC MGP_129S1SvImJ_T0005561.1 MGP_129S1SvImJ_G0004692.1 mouse_genomes_project 9 109907971 109911944 - 4921523L03Rik antisense antisense MGP_129S1SvImJ_T0005448.1 MGP_129S1SvImJ_G0004616.1 mouse_genomes_project 9 34677001 34700126 + Gm26787 antisense antisense MGP_129S1SvImJ_T0093553.1 MGP_129S1SvImJ_G0035110.1 mouse_genomes_project 9 89428697 89454362 + MGP_129S1SvImJ_P0093553 Zfp949 protein_coding protein_coding MGP_129S1SvImJ_T0093554.1 MGP_129S1SvImJ_G0035110.1 mouse_genomes_project 9 89428721 89450578 + MGP_129S1SvImJ_P0093554 Zfp949 protein_coding protein_coding MGP_129S1SvImJ_T0093555.1 MGP_129S1SvImJ_G0035110.1 mouse_genomes_project 9 89428762 89451475 + Zfp949 protein_coding retained_intron MGP_129S1SvImJ_T0093556.1 MGP_129S1SvImJ_G0035110.1 mouse_genomes_project 9 89428777 89435173 + MGP_129S1SvImJ_P0093556 Zfp949 protein_coding protein_coding MGP_129S1SvImJ_T0093557.1 MGP_129S1SvImJ_G0035110.1 mouse_genomes_project 9 89428860 89454362 + MGP_129S1SvImJ_P0093557 Zfp949 protein_coding protein_coding MGP_129S1SvImJ_T0005512.1 MGP_129S1SvImJ_G0004659.1 mouse_genomes_project 9 96633373 96634692 + Gm28424 antisense antisense MGP_129S1SvImJ_T0100154.1 MGP_129S1SvImJ_G0038221.1 mouse_genomes_project 9 10274905 10275012 + Gm26189 snRNA snRNA MGP_129S1SvImJ_T0093527.1 MGP_129S1SvImJ_G0035105.1 mouse_genomes_project 9 88559433 88587811 - MGP_129S1SvImJ_P0093527 Tbx18 protein_coding protein_coding MGP_129S1SvImJ_T0093528.1 MGP_129S1SvImJ_G0035105.1 mouse_genomes_project 9 88580936 88587047 - Tbx18 protein_coding processed_transcript MGP_129S1SvImJ_T0005502.1 MGP_129S1SvImJ_G0004653.1 mouse_genomes_project 9 80848588 80850742 - Gm27227 antisense antisense MGP_129S1SvImJ_T0011764.1 MGP_129S1SvImJ_G0009880.1 mouse_genomes_project 9 104587736 104588058 + Gm25842 misc_RNA misc_RNA MGP_129S1SvImJ_T0091830.1 MGP_129S1SvImJ_G0034603.1 mouse_genomes_project 9 36586778 36587718 + MGP_129S1SvImJ_P0091830 Olfr911-ps1 protein_coding protein_coding MGP_129S1SvImJ_T0091728.1 MGP_129S1SvImJ_G0034555.1 mouse_genomes_project 9 34634426 34661155 - MGP_129S1SvImJ_P0091728 Stt3a protein_coding protein_coding MGP_129S1SvImJ_T0091729.1 MGP_129S1SvImJ_G0034555.1 mouse_genomes_project 9 34634925 34676746 - MGP_129S1SvImJ_P0091729 Stt3a protein_coding protein_coding MGP_129S1SvImJ_T0091730.1 MGP_129S1SvImJ_G0034555.1 mouse_genomes_project 9 34658621 34676711 - MGP_129S1SvImJ_P0091730 Stt3a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091731.1 MGP_129S1SvImJ_G0034555.1 mouse_genomes_project 9 34668374 34669378 - Stt3a protein_coding retained_intron MGP_129S1SvImJ_T0091732.1 MGP_129S1SvImJ_G0034555.1 mouse_genomes_project 9 34668797 34676442 - MGP_129S1SvImJ_P0091732 Stt3a protein_coding protein_coding MGP_129S1SvImJ_T0091733.1 MGP_129S1SvImJ_G0034555.1 mouse_genomes_project 9 34671734 34676665 - Stt3a protein_coding retained_intron MGP_129S1SvImJ_T0091734.1 MGP_129S1SvImJ_G0034555.1 mouse_genomes_project 9 34671954 34676708 - Stt3a protein_coding retained_intron MGP_129S1SvImJ_T0091857.1 MGP_129S1SvImJ_G0034624.1 mouse_genomes_project 9 37133941 37134877 - MGP_129S1SvImJ_P0091857 Olfr937 protein_coding protein_coding MGP_129S1SvImJ_T0100180.1 MGP_129S1SvImJ_G0038247.1 mouse_genomes_project 9 63042453 63042595 + Gm25995 snRNA snRNA MGP_129S1SvImJ_T0091968.1 MGP_129S1SvImJ_G0034685.1 mouse_genomes_project 9 41704225 41729588 + MGP_129S1SvImJ_P0091968 Trim29 protein_coding protein_coding MGP_129S1SvImJ_T0092699.1 MGP_129S1SvImJ_G0034911.1 mouse_genomes_project 9 60135038 60153943 + MGP_129S1SvImJ_P0092699 Larp6 protein_coding protein_coding MGP_129S1SvImJ_T0005479.1 MGP_129S1SvImJ_G0004635.1 mouse_genomes_project 9 57384197 57385372 + Gm16131 antisense antisense MGP_129S1SvImJ_T0093196.1 MGP_129S1SvImJ_G0035029.1 mouse_genomes_project 9 73710808 74213491 - MGP_129S1SvImJ_P0093196 Unc13c protein_coding protein_coding MGP_129S1SvImJ_T0093197.1 MGP_129S1SvImJ_G0035029.1 mouse_genomes_project 9 73710812 74213489 - MGP_129S1SvImJ_P0093197 Unc13c protein_coding unknown_likely_coding MGP_129S1SvImJ_T0093198.1 MGP_129S1SvImJ_G0035029.1 mouse_genomes_project 9 73712250 74177617 - MGP_129S1SvImJ_P0093198 Unc13c protein_coding protein_coding MGP_129S1SvImJ_T0011110.1 MGP_129S1SvImJ_G0009226.1 mouse_genomes_project 9 95880194 95880256 + Mir7656 miRNA miRNA MGP_129S1SvImJ_T0092802.1 MGP_129S1SvImJ_G0034937.1 mouse_genomes_project 9 63825069 63828468 + MGP_129S1SvImJ_P0092802 Snapc5 protein_coding protein_coding MGP_129S1SvImJ_T0094748.1 MGP_129S1SvImJ_G0035324.1 mouse_genomes_project 9 111016562 111032276 - MGP_129S1SvImJ_P0094748 Atrip protein_coding protein_coding MGP_129S1SvImJ_T0094749.1 MGP_129S1SvImJ_G0035324.1 mouse_genomes_project 9 111016600 111032204 - MGP_129S1SvImJ_P0094749 Atrip protein_coding protein_coding MGP_129S1SvImJ_T0094750.1 MGP_129S1SvImJ_G0035324.1 mouse_genomes_project 9 111016625 111020426 - Atrip protein_coding retained_intron MGP_129S1SvImJ_T0094751.1 MGP_129S1SvImJ_G0035324.1 mouse_genomes_project 9 111017476 111023530 - MGP_129S1SvImJ_P0094751 Atrip protein_coding protein_coding MGP_129S1SvImJ_T0094752.1 MGP_129S1SvImJ_G0035324.1 mouse_genomes_project 9 111025612 111027666 - Atrip protein_coding retained_intron MGP_129S1SvImJ_T0094753.1 MGP_129S1SvImJ_G0035324.1 mouse_genomes_project 9 111029890 111032218 - Atrip protein_coding retained_intron MGP_129S1SvImJ_T0092489.1 MGP_129S1SvImJ_G0034850.1 mouse_genomes_project 9 55560481 55639359 + MGP_129S1SvImJ_P0092489 Hmg20a protein_coding protein_coding MGP_129S1SvImJ_T0091708.1 MGP_129S1SvImJ_G0034547.1 mouse_genomes_project 9 33725925 33730588 + 9230113P08Rik protein_coding retained_intron MGP_129S1SvImJ_T0091709.1 MGP_129S1SvImJ_G0034547.1 mouse_genomes_project 9 33725944 33729335 + MGP_129S1SvImJ_P0091709 9230113P08Rik protein_coding protein_coding MGP_129S1SvImJ_T0095091.1 MGP_129S1SvImJ_G0035397.1 mouse_genomes_project 9 117462814 117731664 + MGP_129S1SvImJ_P0095091 Osbpl10 protein_coding protein_coding MGP_129S1SvImJ_T0095092.1 MGP_129S1SvImJ_G0035397.1 mouse_genomes_project 9 117476377 117731666 + MGP_129S1SvImJ_P0095092 Osbpl10 protein_coding protein_coding MGP_129S1SvImJ_T0095093.1 MGP_129S1SvImJ_G0035397.1 mouse_genomes_project 9 117483784 117665079 + MGP_129S1SvImJ_P0095093 Osbpl10 protein_coding protein_coding MGP_129S1SvImJ_T0095094.1 MGP_129S1SvImJ_G0035397.1 mouse_genomes_project 9 117501308 117731660 + MGP_129S1SvImJ_P0095094 Osbpl10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095095.1 MGP_129S1SvImJ_G0035397.1 mouse_genomes_project 9 117540122 117554959 + MGP_129S1SvImJ_P0095095 Osbpl10 protein_coding protein_coding MGP_129S1SvImJ_T0095096.1 MGP_129S1SvImJ_G0035397.1 mouse_genomes_project 9 117554925 117731664 + MGP_129S1SvImJ_P0095096 Osbpl10 protein_coding protein_coding MGP_129S1SvImJ_T0095097.1 MGP_129S1SvImJ_G0035397.1 mouse_genomes_project 9 117574018 117718396 + Osbpl10 protein_coding processed_transcript MGP_129S1SvImJ_T0095098.1 MGP_129S1SvImJ_G0035397.1 mouse_genomes_project 9 117609106 117716802 + Osbpl10 protein_coding processed_transcript MGP_129S1SvImJ_T0095369.1 MGP_129S1SvImJ_G0035482.1 mouse_genomes_project 9 126751412 126776428 - Lztfl1 protein_coding processed_transcript MGP_129S1SvImJ_T0095370.1 MGP_129S1SvImJ_G0035482.1 mouse_genomes_project 9 126754017 126776331 - MGP_129S1SvImJ_P0095370 Lztfl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095371.1 MGP_129S1SvImJ_G0035482.1 mouse_genomes_project 9 126759451 126771873 - MGP_129S1SvImJ_P0095371 Lztfl1 protein_coding protein_coding MGP_129S1SvImJ_T0095372.1 MGP_129S1SvImJ_G0035482.1 mouse_genomes_project 9 126759483 126776405 - MGP_129S1SvImJ_P0095372 Lztfl1 protein_coding protein_coding MGP_129S1SvImJ_T0095373.1 MGP_129S1SvImJ_G0035482.1 mouse_genomes_project 9 126765436 126767443 - Lztfl1 protein_coding retained_intron MGP_129S1SvImJ_T0095374.1 MGP_129S1SvImJ_G0035482.1 mouse_genomes_project 9 126767182 126776356 - Lztfl1 protein_coding processed_transcript MGP_129S1SvImJ_T0095375.1 MGP_129S1SvImJ_G0035482.1 mouse_genomes_project 9 126771726 126776350 - Lztfl1 protein_coding processed_transcript MGP_129S1SvImJ_T0095376.1 MGP_129S1SvImJ_G0035482.1 mouse_genomes_project 9 126771730 126776352 - Lztfl1 protein_coding processed_transcript MGP_129S1SvImJ_T0095377.1 MGP_129S1SvImJ_G0035482.1 mouse_genomes_project 9 126774131 126776385 - Lztfl1 protein_coding retained_intron MGP_129S1SvImJ_T0091704.1 MGP_129S1SvImJ_G0034543.1 mouse_genomes_project 9 33553016 33554220 + MGP_129S1SvImJ_P0091704 Gm17677 protein_coding protein_coding MGP_129S1SvImJ_T0091100.1 MGP_129S1SvImJ_G0034318.1 mouse_genomes_project 9 4040124 4063286 + MGP_129S1SvImJ_P0091100 Dcun1d5 protein_coding protein_coding MGP_129S1SvImJ_T0092026.1 MGP_129S1SvImJ_G0034700.1 mouse_genomes_project 9 42788685 42801501 - MGP_129S1SvImJ_P0092026 C2cd2l protein_coding protein_coding MGP_129S1SvImJ_T0092885.1 MGP_129S1SvImJ_G0034967.1 mouse_genomes_project 9 65626755 65681442 - MGP_129S1SvImJ_P0092885 Trip4 protein_coding protein_coding MGP_129S1SvImJ_T0092886.1 MGP_129S1SvImJ_G0034967.1 mouse_genomes_project 9 65632385 65648494 - Trip4 protein_coding retained_intron MGP_129S1SvImJ_T0092887.1 MGP_129S1SvImJ_G0034967.1 mouse_genomes_project 9 65676016 65707773 - MGP_129S1SvImJ_P0092887 Trip4 protein_coding protein_coding MGP_129S1SvImJ_T0092891.1 MGP_129S1SvImJ_G0034967.1 mouse_genomes_project 9 65691043 65707706 - Trip4 protein_coding processed_transcript MGP_129S1SvImJ_T0092892.1 MGP_129S1SvImJ_G0034967.1 mouse_genomes_project 9 65691381 65707773 - Trip4 protein_coding processed_transcript MGP_129S1SvImJ_T0092893.1 MGP_129S1SvImJ_G0034967.1 mouse_genomes_project 9 65691847 65707781 - Trip4 protein_coding processed_transcript MGP_129S1SvImJ_T0092894.1 MGP_129S1SvImJ_G0034967.1 mouse_genomes_project 9 65694756 65707773 - Trip4 protein_coding retained_intron MGP_129S1SvImJ_T0092126.1 MGP_129S1SvImJ_G0034734.1 mouse_genomes_project 9 43729136 43741197 + BC049352 protein_coding lincRNA MGP_129S1SvImJ_T0092127.1 MGP_129S1SvImJ_G0034734.1 mouse_genomes_project 9 43729163 43798470 + BC049352 protein_coding lincRNA MGP_129S1SvImJ_T0092128.1 MGP_129S1SvImJ_G0034734.1 mouse_genomes_project 9 43743975 43798470 + BC049352 protein_coding lincRNA MGP_129S1SvImJ_T0092129.1 MGP_129S1SvImJ_G0034734.1 mouse_genomes_project 9 43743975 43798430 + MGP_129S1SvImJ_P0092129 BC049352 protein_coding protein_coding MGP_129S1SvImJ_T0091883.1 MGP_129S1SvImJ_G0034644.1 mouse_genomes_project 9 37882143 37883082 + MGP_129S1SvImJ_P0091883 Olfr150 protein_coding protein_coding MGP_129S1SvImJ_T0091480.1 MGP_129S1SvImJ_G0034472.1 mouse_genomes_project 9 19265247 19277947 - MGP_129S1SvImJ_P0091480 Ccdc151 protein_coding protein_coding MGP_129S1SvImJ_T0091481.1 MGP_129S1SvImJ_G0034472.1 mouse_genomes_project 9 19265247 19277947 - MGP_129S1SvImJ_P0091481 Ccdc151 protein_coding protein_coding MGP_129S1SvImJ_T0092138.1 MGP_129S1SvImJ_G0034740.1 mouse_genomes_project 9 44350329 44419716 - MGP_129S1SvImJ_P0092138 Cep164 protein_coding protein_coding MGP_129S1SvImJ_T0092139.1 MGP_129S1SvImJ_G0034740.1 mouse_genomes_project 9 44350331 44419610 - MGP_129S1SvImJ_P0092139 Cep164 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0092140.1 MGP_129S1SvImJ_G0034740.1 mouse_genomes_project 9 44354125 44355896 - Cep164 protein_coding retained_intron MGP_129S1SvImJ_T0092141.1 MGP_129S1SvImJ_G0034740.1 mouse_genomes_project 9 44363628 44387953 - MGP_129S1SvImJ_P0092141 Cep164 protein_coding protein_coding MGP_129S1SvImJ_T0016093.1 MGP_129S1SvImJ_G0014182.1 mouse_genomes_project 9 78893283 78893861 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091961.1 MGP_129S1SvImJ_G0034680.1 mouse_genomes_project 9 41334877 41487283 - MGP_129S1SvImJ_P0091961 Arhgef12 protein_coding protein_coding MGP_129S1SvImJ_T0091962.1 MGP_129S1SvImJ_G0034680.1 mouse_genomes_project 9 41334878 41487051 - MGP_129S1SvImJ_P0091962 Arhgef12 protein_coding protein_coding MGP_129S1SvImJ_T0100216.1 MGP_129S1SvImJ_G0038283.1 mouse_genomes_project 9 110724611 110724718 - Gm24259 snRNA snRNA MGP_129S1SvImJ_T0093644.1 MGP_129S1SvImJ_G0035134.1 mouse_genomes_project 9 96569714 96633117 - MGP_129S1SvImJ_P0093644 U2surp protein_coding protein_coding MGP_129S1SvImJ_T0093645.1 MGP_129S1SvImJ_G0035134.1 mouse_genomes_project 9 96573786 96633219 - MGP_129S1SvImJ_P0093645 U2surp protein_coding protein_coding MGP_129S1SvImJ_T0093646.1 MGP_129S1SvImJ_G0035134.1 mouse_genomes_project 9 96574162 96633218 - MGP_129S1SvImJ_P0093646 U2surp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093647.1 MGP_129S1SvImJ_G0035134.1 mouse_genomes_project 9 96574213 96633084 - MGP_129S1SvImJ_P0093647 U2surp protein_coding unknown_likely_coding MGP_129S1SvImJ_T0093648.1 MGP_129S1SvImJ_G0035134.1 mouse_genomes_project 9 96593450 96597703 - U2surp protein_coding retained_intron MGP_129S1SvImJ_T0093649.1 MGP_129S1SvImJ_G0035134.1 mouse_genomes_project 9 96610767 96633082 - MGP_129S1SvImJ_P0093649 U2surp protein_coding protein_coding MGP_129S1SvImJ_T0093650.1 MGP_129S1SvImJ_G0035134.1 mouse_genomes_project 9 96612909 96633079 - MGP_129S1SvImJ_P0093650 U2surp protein_coding protein_coding MGP_129S1SvImJ_T0093651.1 MGP_129S1SvImJ_G0035134.1 mouse_genomes_project 9 96623235 96633108 - U2surp protein_coding retained_intron MGP_129S1SvImJ_T0093652.1 MGP_129S1SvImJ_G0035134.1 mouse_genomes_project 9 96630256 96633102 - U2surp protein_coding retained_intron MGP_129S1SvImJ_T0091229.1 MGP_129S1SvImJ_G0034361.1 mouse_genomes_project 9 12216335 12237759 + MGP_129S1SvImJ_P0091229 Vstm5 protein_coding protein_coding MGP_129S1SvImJ_T0091193.1 MGP_129S1SvImJ_G0034348.1 mouse_genomes_project 9 11290726 11320176 - MGP_129S1SvImJ_P0091193 Endod1 protein_coding protein_coding MGP_129S1SvImJ_T0091856.1 MGP_129S1SvImJ_G0034623.1 mouse_genomes_project 9 37123618 37124554 - MGP_129S1SvImJ_P0091856 Olfr936 protein_coding protein_coding MGP_129S1SvImJ_T0094055.1 MGP_129S1SvImJ_G0035216.1 mouse_genomes_project 9 107375864 107416377 + Pik3r4 protein_coding retained_intron MGP_129S1SvImJ_T0094056.1 MGP_129S1SvImJ_G0035216.1 mouse_genomes_project 9 107375867 107377640 + MGP_129S1SvImJ_P0094056 Pik3r4 protein_coding protein_coding MGP_129S1SvImJ_T0094057.1 MGP_129S1SvImJ_G0035216.1 mouse_genomes_project 9 107375894 107389259 + Pik3r4 protein_coding retained_intron MGP_129S1SvImJ_T0094058.1 MGP_129S1SvImJ_G0035216.1 mouse_genomes_project 9 107375901 107397404 + Pik3r4 protein_coding retained_intron MGP_129S1SvImJ_T0094059.1 MGP_129S1SvImJ_G0035216.1 mouse_genomes_project 9 107375916 107424614 + MGP_129S1SvImJ_P0094059 Pik3r4 protein_coding protein_coding MGP_129S1SvImJ_T0094060.1 MGP_129S1SvImJ_G0035216.1 mouse_genomes_project 9 107376050 107424739 + MGP_129S1SvImJ_P0094060 Pik3r4 protein_coding protein_coding MGP_129S1SvImJ_T0094061.1 MGP_129S1SvImJ_G0035216.1 mouse_genomes_project 9 107376081 107381690 + MGP_129S1SvImJ_P0094061 Pik3r4 protein_coding protein_coding MGP_129S1SvImJ_T0094062.1 MGP_129S1SvImJ_G0035216.1 mouse_genomes_project 9 107391972 107402597 + MGP_129S1SvImJ_P0094062 Pik3r4 protein_coding protein_coding MGP_129S1SvImJ_T0094063.1 MGP_129S1SvImJ_G0035216.1 mouse_genomes_project 9 107394740 107396944 + Pik3r4 protein_coding retained_intron MGP_129S1SvImJ_T0094064.1 MGP_129S1SvImJ_G0035216.1 mouse_genomes_project 9 107418782 107423477 + Pik3r4 protein_coding retained_intron MGP_129S1SvImJ_T0092808.1 MGP_129S1SvImJ_G0034940.1 mouse_genomes_project 9 63940824 63972138 + MGP_129S1SvImJ_P0092808 Tipin protein_coding unknown_likely_coding MGP_129S1SvImJ_T0002476.1 MGP_129S1SvImJ_G0002385.1 mouse_genomes_project 9 109520148 109521892 - TEC TEC MGP_129S1SvImJ_T0009330.1 MGP_129S1SvImJ_G0007498.1 mouse_genomes_project 9 104268583 104269550 + 4930533D04Rik lincRNA lincRNA MGP_129S1SvImJ_T0094018.1 MGP_129S1SvImJ_G0035212.1 mouse_genomes_project 9 106869329 106871072 - MGP_129S1SvImJ_P0094018 1700080E11Rik protein_coding protein_coding MGP_129S1SvImJ_T0094019.1 MGP_129S1SvImJ_G0035212.1 mouse_genomes_project 9 106870291 106871056 - MGP_129S1SvImJ_P0094019 1700080E11Rik protein_coding protein_coding MGP_129S1SvImJ_T0092749.1 MGP_129S1SvImJ_G0034922.1 mouse_genomes_project 9 62223353 62340823 + MGP_129S1SvImJ_P0092749 Itga11 protein_coding protein_coding MGP_129S1SvImJ_T0092750.1 MGP_129S1SvImJ_G0034922.1 mouse_genomes_project 9 62223387 62333938 + Itga11 protein_coding retained_intron MGP_129S1SvImJ_T0092888.1 MGP_129S1SvImJ_G0034968.1 mouse_genomes_project 9 65686665 65700996 + MGP_129S1SvImJ_P0092888 2810417H13Rik protein_coding protein_coding MGP_129S1SvImJ_T0092889.1 MGP_129S1SvImJ_G0034968.1 mouse_genomes_project 9 65686748 65690286 + 2810417H13Rik protein_coding retained_intron MGP_129S1SvImJ_T0092890.1 MGP_129S1SvImJ_G0034968.1 mouse_genomes_project 9 65686790 65689614 + 2810417H13Rik protein_coding retained_intron MGP_129S1SvImJ_T0092856.1 MGP_129S1SvImJ_G0034957.1 mouse_genomes_project 9 65128585 65144858 + MGP_129S1SvImJ_P0092856 Rasl12 protein_coding protein_coding MGP_129S1SvImJ_T0092857.1 MGP_129S1SvImJ_G0034957.1 mouse_genomes_project 9 65128585 65142713 + MGP_129S1SvImJ_P0092857 Rasl12 protein_coding protein_coding MGP_129S1SvImJ_T0005483.1 MGP_129S1SvImJ_G0004638.1 mouse_genomes_project 9 66426220 66436263 + Gm15563 antisense antisense MGP_129S1SvImJ_T0011135.1 MGP_129S1SvImJ_G0009251.1 mouse_genomes_project 9 125680141 125680240 + Mir138-1 miRNA miRNA MGP_129S1SvImJ_T0091981.1 MGP_129S1SvImJ_G0034690.1 mouse_genomes_project 9 42548244 42569521 - MGP_129S1SvImJ_P0091981 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091982.1 MGP_129S1SvImJ_G0034690.1 mouse_genomes_project 9 42548256 42557029 - protein_coding processed_transcript MGP_129S1SvImJ_T0009219.1 MGP_129S1SvImJ_G0007408.1 mouse_genomes_project 9 18961216 18966913 - Gm26511 lincRNA lincRNA MGP_129S1SvImJ_T0093204.1 MGP_129S1SvImJ_G0035031.1 mouse_genomes_project 9 75126390 75156186 + MGP_129S1SvImJ_P0093204 Onecut1 protein_coding protein_coding MGP_129S1SvImJ_T0093205.1 MGP_129S1SvImJ_G0035031.1 mouse_genomes_project 9 75130952 75154765 + Onecut1 protein_coding processed_transcript MGP_129S1SvImJ_T0091272.1 MGP_129S1SvImJ_G0034374.1 mouse_genomes_project 9 15455976 15458279 + MGP_129S1SvImJ_P0091272 Gm5612 protein_coding protein_coding MGP_129S1SvImJ_T0091076.1 MGP_129S1SvImJ_G0034313.1 mouse_genomes_project 9 2070460 2090013 + MGP_129S1SvImJ_P0091076 protein_coding protein_coding MGP_129S1SvImJ_T0091077.1 MGP_129S1SvImJ_G0034313.1 mouse_genomes_project 9 2070481 2106187 + MGP_129S1SvImJ_P0091077 protein_coding protein_coding MGP_129S1SvImJ_T0091078.1 MGP_129S1SvImJ_G0034313.1 mouse_genomes_project 9 2070492 2098644 + protein_coding retained_intron MGP_129S1SvImJ_T0091079.1 MGP_129S1SvImJ_G0034313.1 mouse_genomes_project 9 2070492 2097767 + MGP_129S1SvImJ_P0091079 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091080.1 MGP_129S1SvImJ_G0034313.1 mouse_genomes_project 9 2070497 2088041 + protein_coding retained_intron MGP_129S1SvImJ_T0091081.1 MGP_129S1SvImJ_G0034313.1 mouse_genomes_project 9 2070540 2106143 + MGP_129S1SvImJ_P0091081 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091082.1 MGP_129S1SvImJ_G0034313.1 mouse_genomes_project 9 2087699 2105494 + MGP_129S1SvImJ_P0091082 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091083.1 MGP_129S1SvImJ_G0034313.1 mouse_genomes_project 9 2089647 2096651 + protein_coding retained_intron MGP_129S1SvImJ_T0091858.1 MGP_129S1SvImJ_G0034625.1 mouse_genomes_project 9 37160213 37161332 - MGP_129S1SvImJ_P0091858 Olfr938 protein_coding protein_coding MGP_129S1SvImJ_T0002469.1 MGP_129S1SvImJ_G0002378.1 mouse_genomes_project 9 105692009 105694182 - TEC TEC MGP_129S1SvImJ_T0092849.1 MGP_129S1SvImJ_G0034953.1 mouse_genomes_project 9 65016877 65057738 + MGP_129S1SvImJ_P0092849 Clpx protein_coding protein_coding MGP_129S1SvImJ_T0092850.1 MGP_129S1SvImJ_G0034953.1 mouse_genomes_project 9 65016912 65057739 + MGP_129S1SvImJ_P0092850 Clpx protein_coding protein_coding MGP_129S1SvImJ_T0092851.1 MGP_129S1SvImJ_G0034953.1 mouse_genomes_project 9 65016949 65033997 + Clpx protein_coding retained_intron MGP_129S1SvImJ_T0092852.1 MGP_129S1SvImJ_G0034953.1 mouse_genomes_project 9 65034900 65045043 + MGP_129S1SvImJ_P0092852 Clpx protein_coding protein_coding MGP_129S1SvImJ_T0098406.1 MGP_129S1SvImJ_G0036491.1 mouse_genomes_project 9 36579081 36580014 + pseudogene pseudogene MGP_129S1SvImJ_T0016166.1 MGP_129S1SvImJ_G0014255.1 mouse_genomes_project 9 111582788 111584001 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0092406.1 MGP_129S1SvImJ_G0034825.1 mouse_genomes_project 9 53586115 53601439 - MGP_129S1SvImJ_P0092406 Cib2 protein_coding protein_coding MGP_129S1SvImJ_T0091800.1 MGP_129S1SvImJ_G0034574.1 mouse_genomes_project 9 35792889 35793893 + MGP_129S1SvImJ_P0091800 protein_coding protein_coding MGP_129S1SvImJ_T0011058.1 MGP_129S1SvImJ_G0009174.1 mouse_genomes_project 9 5141861 5141957 + Mir1899 miRNA miRNA MGP_129S1SvImJ_T0094997.1 MGP_129S1SvImJ_G0035371.1 mouse_genomes_project 9 113454017 113504300 - MGP_129S1SvImJ_P0094997 Mlh1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094998.1 MGP_129S1SvImJ_G0035371.1 mouse_genomes_project 9 113454041 113504544 - MGP_129S1SvImJ_P0094998 Mlh1 protein_coding protein_coding MGP_129S1SvImJ_T0094999.1 MGP_129S1SvImJ_G0035371.1 mouse_genomes_project 9 113454318 113456403 - Mlh1 protein_coding retained_intron MGP_129S1SvImJ_T0095000.1 MGP_129S1SvImJ_G0035371.1 mouse_genomes_project 9 113455650 113456715 - Mlh1 protein_coding retained_intron MGP_129S1SvImJ_T0095001.1 MGP_129S1SvImJ_G0035371.1 mouse_genomes_project 9 113455668 113504354 - Mlh1 protein_coding retained_intron MGP_129S1SvImJ_T0095002.1 MGP_129S1SvImJ_G0035371.1 mouse_genomes_project 9 113467060 113479558 - Mlh1 protein_coding retained_intron MGP_129S1SvImJ_T0095003.1 MGP_129S1SvImJ_G0035371.1 mouse_genomes_project 9 113467346 113489578 - MGP_129S1SvImJ_P0095003 Mlh1 protein_coding protein_coding MGP_129S1SvImJ_T0095004.1 MGP_129S1SvImJ_G0035371.1 mouse_genomes_project 9 113481020 113493608 - MGP_129S1SvImJ_P0095004 Mlh1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095005.1 MGP_129S1SvImJ_G0035371.1 mouse_genomes_project 9 113489274 113504288 - Mlh1 protein_coding processed_transcript MGP_129S1SvImJ_T0016085.1 MGP_129S1SvImJ_G0014174.1 mouse_genomes_project 9 77051722 77052098 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0094928.1 MGP_129S1SvImJ_G0035354.1 mouse_genomes_project 9 112894094 112920165 - MGP_129S1SvImJ_P0094928 Pth1r protein_coding protein_coding MGP_129S1SvImJ_T0094929.1 MGP_129S1SvImJ_G0035354.1 mouse_genomes_project 9 112894097 112914322 - MGP_129S1SvImJ_P0094929 Pth1r protein_coding protein_coding MGP_129S1SvImJ_T0094930.1 MGP_129S1SvImJ_G0035354.1 mouse_genomes_project 9 112894146 112916004 - MGP_129S1SvImJ_P0094930 Pth1r protein_coding protein_coding MGP_129S1SvImJ_T0094931.1 MGP_129S1SvImJ_G0035354.1 mouse_genomes_project 9 112899461 112920099 - MGP_129S1SvImJ_P0094931 Pth1r protein_coding protein_coding MGP_129S1SvImJ_T0094932.1 MGP_129S1SvImJ_G0035354.1 mouse_genomes_project 9 112903592 112920188 - MGP_129S1SvImJ_P0094932 Pth1r protein_coding protein_coding MGP_129S1SvImJ_T0092045.1 MGP_129S1SvImJ_G0034711.1 mouse_genomes_project 9 42944823 42946891 - MGP_129S1SvImJ_P0092045 Upk2 protein_coding protein_coding MGP_129S1SvImJ_T0091548.1 MGP_129S1SvImJ_G0034500.1 mouse_genomes_project 9 24202489 24245873 - MGP_129S1SvImJ_P0091548 Glb1l2 protein_coding protein_coding MGP_129S1SvImJ_T0091549.1 MGP_129S1SvImJ_G0034500.1 mouse_genomes_project 9 24202490 24245909 - MGP_129S1SvImJ_P0091549 Glb1l2 protein_coding protein_coding MGP_129S1SvImJ_T0091550.1 MGP_129S1SvImJ_G0034500.1 mouse_genomes_project 9 24203213 24245862 - MGP_129S1SvImJ_P0091550 Glb1l2 protein_coding protein_coding MGP_129S1SvImJ_T0091551.1 MGP_129S1SvImJ_G0034500.1 mouse_genomes_project 9 24204648 24242025 - MGP_129S1SvImJ_P0091551 Glb1l2 protein_coding protein_coding MGP_129S1SvImJ_T0091552.1 MGP_129S1SvImJ_G0034500.1 mouse_genomes_project 9 24206942 24207916 - Glb1l2 protein_coding retained_intron MGP_129S1SvImJ_T0091553.1 MGP_129S1SvImJ_G0034500.1 mouse_genomes_project 9 24213503 24231643 - Glb1l2 protein_coding retained_intron MGP_129S1SvImJ_T0091554.1 MGP_129S1SvImJ_G0034500.1 mouse_genomes_project 9 24220160 24245863 - MGP_129S1SvImJ_P0091554 Glb1l2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092731.1 MGP_129S1SvImJ_G0034919.1 mouse_genomes_project 9 61799135 61810673 - MGP_129S1SvImJ_P0092731 Spesp1 protein_coding protein_coding MGP_129S1SvImJ_T0091381.1 MGP_129S1SvImJ_G0034432.1 mouse_genomes_project 9 18075759 18121308 - MGP_129S1SvImJ_P0091381 Dnmt1 protein_coding protein_coding MGP_129S1SvImJ_T0091393.1 MGP_129S1SvImJ_G0034443.1 mouse_genomes_project 9 18354270 18405897 + MGP_129S1SvImJ_P0091393 Pde4a protein_coding protein_coding MGP_129S1SvImJ_T0091394.1 MGP_129S1SvImJ_G0034443.1 mouse_genomes_project 9 18372545 18404276 + Pde4a protein_coding retained_intron MGP_129S1SvImJ_T0091395.1 MGP_129S1SvImJ_G0034443.1 mouse_genomes_project 9 18375030 18384394 + Pde4a protein_coding retained_intron MGP_129S1SvImJ_T0091396.1 MGP_129S1SvImJ_G0034443.1 mouse_genomes_project 9 18375032 18404276 + MGP_129S1SvImJ_P0091396 Pde4a protein_coding protein_coding MGP_129S1SvImJ_T0091397.1 MGP_129S1SvImJ_G0034443.1 mouse_genomes_project 9 18383092 18385655 + Pde4a protein_coding retained_intron MGP_129S1SvImJ_T0091398.1 MGP_129S1SvImJ_G0034443.1 mouse_genomes_project 9 18387546 18404276 + MGP_129S1SvImJ_P0091398 Pde4a protein_coding protein_coding MGP_129S1SvImJ_T0091647.1 MGP_129S1SvImJ_G0034529.1 mouse_genomes_project 9 32926013 32978965 - MGP_129S1SvImJ_P0091647 Dcps protein_coding protein_coding MGP_129S1SvImJ_T0091648.1 MGP_129S1SvImJ_G0034529.1 mouse_genomes_project 9 32926017 32978963 - MGP_129S1SvImJ_P0091648 Dcps protein_coding protein_coding MGP_129S1SvImJ_T0091649.1 MGP_129S1SvImJ_G0034529.1 mouse_genomes_project 9 32927912 32978897 - MGP_129S1SvImJ_P0091649 Dcps protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091815.1 MGP_129S1SvImJ_G0034588.1 mouse_genomes_project 9 36257823 36258765 + MGP_129S1SvImJ_P0091815 Olfr893 protein_coding protein_coding MGP_129S1SvImJ_T0094181.1 MGP_129S1SvImJ_G0035243.1 mouse_genomes_project 9 108507134 108620092 - MGP_129S1SvImJ_P0094181 Rad54l2 protein_coding protein_coding MGP_129S1SvImJ_T0094182.1 MGP_129S1SvImJ_G0035243.1 mouse_genomes_project 9 108507841 108512351 - MGP_129S1SvImJ_P0094182 Rad54l2 protein_coding protein_coding MGP_129S1SvImJ_T0094183.1 MGP_129S1SvImJ_G0035243.1 mouse_genomes_project 9 108547644 108548582 - MGP_129S1SvImJ_P0094183 Rad54l2 protein_coding protein_coding MGP_129S1SvImJ_T0094184.1 MGP_129S1SvImJ_G0035243.1 mouse_genomes_project 9 108617661 108620074 - Rad54l2 protein_coding retained_intron MGP_129S1SvImJ_T0016151.1 MGP_129S1SvImJ_G0014240.1 mouse_genomes_project 9 102925626 102925990 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0093709.1 MGP_129S1SvImJ_G0035145.1 mouse_genomes_project 9 97743732 97844550 - MGP_129S1SvImJ_P0093709 Rasa2 protein_coding protein_coding MGP_129S1SvImJ_T0093710.1 MGP_129S1SvImJ_G0035145.1 mouse_genomes_project 9 97746742 97749616 - Rasa2 protein_coding retained_intron MGP_129S1SvImJ_T0093711.1 MGP_129S1SvImJ_G0035145.1 mouse_genomes_project 9 97750718 97844469 - MGP_129S1SvImJ_P0093711 Rasa2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093712.1 MGP_129S1SvImJ_G0035145.1 mouse_genomes_project 9 97761020 97776402 - Rasa2 protein_coding retained_intron MGP_129S1SvImJ_T0093713.1 MGP_129S1SvImJ_G0035145.1 mouse_genomes_project 9 97761727 97768302 - Rasa2 protein_coding retained_intron MGP_129S1SvImJ_T0093714.1 MGP_129S1SvImJ_G0035145.1 mouse_genomes_project 9 97776246 97784860 - Rasa2 protein_coding retained_intron MGP_129S1SvImJ_T0009327.1 MGP_129S1SvImJ_G0007495.1 mouse_genomes_project 9 102831085 102836864 + Gm28979 lincRNA lincRNA MGP_129S1SvImJ_T0101426.1 MGP_129S1SvImJ_G0039493.1 mouse_genomes_project 9 1869510 1869645 + Gm24896 snoRNA snoRNA MGP_129S1SvImJ_T0091071.1 MGP_129S1SvImJ_G0034310.1 mouse_genomes_project 9 1104844 1108170 + MGP_129S1SvImJ_P0091071 Msantd4 protein_coding protein_coding MGP_129S1SvImJ_T0011106.1 MGP_129S1SvImJ_G0009222.1 mouse_genomes_project 9 73211688 73211810 + Gm27353 miRNA miRNA MGP_129S1SvImJ_T0091852.1 MGP_129S1SvImJ_G0034619.1 mouse_genomes_project 9 37050454 37051457 + MGP_129S1SvImJ_P0091852 Olfr933 protein_coding protein_coding MGP_129S1SvImJ_T0091735.1 MGP_129S1SvImJ_G0034556.1 mouse_genomes_project 9 34696627 34715114 - MGP_129S1SvImJ_P0091735 Ei24 protein_coding protein_coding MGP_129S1SvImJ_T0091736.1 MGP_129S1SvImJ_G0034556.1 mouse_genomes_project 9 34696627 34715031 - MGP_129S1SvImJ_P0091736 Ei24 protein_coding protein_coding MGP_129S1SvImJ_T0091737.1 MGP_129S1SvImJ_G0034556.1 mouse_genomes_project 9 34697346 34700665 - Ei24 protein_coding retained_intron MGP_129S1SvImJ_T0091738.1 MGP_129S1SvImJ_G0034556.1 mouse_genomes_project 9 34697643 34700170 - Ei24 protein_coding retained_intron MGP_129S1SvImJ_T0091739.1 MGP_129S1SvImJ_G0034556.1 mouse_genomes_project 9 34700233 34703502 - Ei24 protein_coding retained_intron MGP_129S1SvImJ_T0091740.1 MGP_129S1SvImJ_G0034556.1 mouse_genomes_project 9 34703093 34714778 - MGP_129S1SvImJ_P0091740 Ei24 protein_coding protein_coding MGP_129S1SvImJ_T0091741.1 MGP_129S1SvImJ_G0034556.1 mouse_genomes_project 9 34703102 34708024 - MGP_129S1SvImJ_P0091741 Ei24 protein_coding protein_coding MGP_129S1SvImJ_T0091742.1 MGP_129S1SvImJ_G0034556.1 mouse_genomes_project 9 34704011 34715119 - MGP_129S1SvImJ_P0091742 Ei24 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092440.1 MGP_129S1SvImJ_G0034839.1 mouse_genomes_project 9 54292268 54311074 + MGP_129S1SvImJ_P0092440 Fbxo22 protein_coding protein_coding MGP_129S1SvImJ_T0092441.1 MGP_129S1SvImJ_G0034839.1 mouse_genomes_project 9 54292329 54311072 + MGP_129S1SvImJ_P0092441 Fbxo22 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092442.1 MGP_129S1SvImJ_G0034839.1 mouse_genomes_project 9 54292331 54311065 + MGP_129S1SvImJ_P0092442 Fbxo22 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092443.1 MGP_129S1SvImJ_G0034839.1 mouse_genomes_project 9 54292533 54311072 + MGP_129S1SvImJ_P0092443 Fbxo22 protein_coding protein_coding MGP_129S1SvImJ_T0092444.1 MGP_129S1SvImJ_G0034839.1 mouse_genomes_project 9 54297006 54305529 + MGP_129S1SvImJ_P0092444 Fbxo22 protein_coding protein_coding MGP_129S1SvImJ_T0093925.1 MGP_129S1SvImJ_G0035194.1 mouse_genomes_project 9 104797658 104814779 - MGP_129S1SvImJ_P0093925 Srprb protein_coding protein_coding MGP_129S1SvImJ_T0093926.1 MGP_129S1SvImJ_G0035194.1 mouse_genomes_project 9 104798716 104814771 - Srprb protein_coding retained_intron MGP_129S1SvImJ_T0093928.1 MGP_129S1SvImJ_G0035194.1 mouse_genomes_project 9 104799880 104801791 - Srprb protein_coding processed_transcript MGP_129S1SvImJ_T0091220.1 MGP_129S1SvImJ_G0034358.1 mouse_genomes_project 9 11849813 11867889 - MGP_129S1SvImJ_P0091220 Izumo1r protein_coding protein_coding MGP_129S1SvImJ_T0091221.1 MGP_129S1SvImJ_G0034358.1 mouse_genomes_project 9 11857053 11867954 - MGP_129S1SvImJ_P0091221 Izumo1r protein_coding protein_coding MGP_129S1SvImJ_T0091222.1 MGP_129S1SvImJ_G0034358.1 mouse_genomes_project 9 11864027 11867937 - MGP_129S1SvImJ_P0091222 Izumo1r protein_coding protein_coding MGP_129S1SvImJ_T0091223.1 MGP_129S1SvImJ_G0034358.1 mouse_genomes_project 9 11864032 11867761 - MGP_129S1SvImJ_P0091223 Izumo1r protein_coding protein_coding MGP_129S1SvImJ_T0091224.1 MGP_129S1SvImJ_G0034358.1 mouse_genomes_project 9 11864774 11867759 - MGP_129S1SvImJ_P0091224 Izumo1r protein_coding protein_coding MGP_129S1SvImJ_T0091829.1 MGP_129S1SvImJ_G0034602.1 mouse_genomes_project 9 36566243 36567176 + MGP_129S1SvImJ_P0091829 Olfr907 protein_coding protein_coding MGP_129S1SvImJ_T0011086.1 MGP_129S1SvImJ_G0009202.1 mouse_genomes_project 9 50018420 50018497 - Mir34c miRNA miRNA MGP_129S1SvImJ_T0002377.1 MGP_129S1SvImJ_G0002287.1 mouse_genomes_project 9 32226849 32247645 - TEC TEC MGP_129S1SvImJ_T0101490.1 MGP_129S1SvImJ_G0039557.1 mouse_genomes_project 9 104619851 104619984 - Gm22595 snoRNA snoRNA MGP_129S1SvImJ_T0094523.1 MGP_129S1SvImJ_G0035294.1 mouse_genomes_project 9 110298363 110347534 + MGP_129S1SvImJ_P0094523 Usp4 protein_coding protein_coding MGP_129S1SvImJ_T0094524.1 MGP_129S1SvImJ_G0035294.1 mouse_genomes_project 9 110298384 110338639 + MGP_129S1SvImJ_P0094524 Usp4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094525.1 MGP_129S1SvImJ_G0035294.1 mouse_genomes_project 9 110298407 110310535 + Usp4 protein_coding retained_intron MGP_129S1SvImJ_T0094526.1 MGP_129S1SvImJ_G0035294.1 mouse_genomes_project 9 110298423 110347509 + MGP_129S1SvImJ_P0094526 Usp4 protein_coding protein_coding MGP_129S1SvImJ_T0094527.1 MGP_129S1SvImJ_G0035294.1 mouse_genomes_project 9 110309175 110310650 + Usp4 protein_coding processed_transcript MGP_129S1SvImJ_T0094528.1 MGP_129S1SvImJ_G0035294.1 mouse_genomes_project 9 110312416 110315435 + Usp4 protein_coding retained_intron MGP_129S1SvImJ_T0094529.1 MGP_129S1SvImJ_G0035294.1 mouse_genomes_project 9 110320494 110322804 + Usp4 protein_coding retained_intron MGP_129S1SvImJ_T0094530.1 MGP_129S1SvImJ_G0035294.1 mouse_genomes_project 9 110325254 110347248 + MGP_129S1SvImJ_P0094530 Usp4 protein_coding protein_coding MGP_129S1SvImJ_T0094531.1 MGP_129S1SvImJ_G0035294.1 mouse_genomes_project 9 110334069 110346781 + MGP_129S1SvImJ_P0094531 Usp4 protein_coding protein_coding MGP_129S1SvImJ_T0094532.1 MGP_129S1SvImJ_G0035294.1 mouse_genomes_project 9 110345864 110347234 + Usp4 protein_coding retained_intron MGP_129S1SvImJ_T0094797.1 MGP_129S1SvImJ_G0035338.1 mouse_genomes_project 9 111941447 111943653 - MGP_129S1SvImJ_P0094797 Camp protein_coding protein_coding MGP_129S1SvImJ_T0002400.1 MGP_129S1SvImJ_G0002310.1 mouse_genomes_project 9 72869402 72872904 + TEC TEC MGP_129S1SvImJ_T0016157.1 MGP_129S1SvImJ_G0014246.1 mouse_genomes_project 9 105825234 105825847 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095357.1 MGP_129S1SvImJ_G0035477.1 mouse_genomes_project 9 126528575 126576280 + MGP_129S1SvImJ_P0095357 Limd1 protein_coding protein_coding MGP_129S1SvImJ_T0016077.1 MGP_129S1SvImJ_G0014166.1 mouse_genomes_project 9 73272761 73273068 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091507.1 MGP_129S1SvImJ_G0034487.1 mouse_genomes_project 9 19768332 19788378 - MGP_129S1SvImJ_P0091507 Rp9 protein_coding protein_coding MGP_129S1SvImJ_T0091763.1 MGP_129S1SvImJ_G0034559.1 mouse_genomes_project 9 35167259 35185362 + MGP_129S1SvImJ_P0091763 Tmem218 protein_coding protein_coding MGP_129S1SvImJ_T0093172.1 MGP_129S1SvImJ_G0035024.1 mouse_genomes_project 9 73213886 73249359 - MGP_129S1SvImJ_P0093172 Pigb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093173.1 MGP_129S1SvImJ_G0035024.1 mouse_genomes_project 9 73214948 73222119 - MGP_129S1SvImJ_P0093173 Pigb protein_coding protein_coding MGP_129S1SvImJ_T0093175.1 MGP_129S1SvImJ_G0035024.1 mouse_genomes_project 9 73220172 73248680 - MGP_129S1SvImJ_P0093175 Pigb protein_coding protein_coding MGP_129S1SvImJ_T0093176.1 MGP_129S1SvImJ_G0035024.1 mouse_genomes_project 9 73221125 73248632 - MGP_129S1SvImJ_P0093176 Pigb protein_coding protein_coding MGP_129S1SvImJ_T0093178.1 MGP_129S1SvImJ_G0035024.1 mouse_genomes_project 9 73222158 73248680 - MGP_129S1SvImJ_P0093178 Pigb protein_coding protein_coding MGP_129S1SvImJ_T0093179.1 MGP_129S1SvImJ_G0035024.1 mouse_genomes_project 9 73224073 73225667 - Pigb protein_coding retained_intron MGP_129S1SvImJ_T0093180.1 MGP_129S1SvImJ_G0035024.1 mouse_genomes_project 9 73228807 73245554 - MGP_129S1SvImJ_P0093180 Pigb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093181.1 MGP_129S1SvImJ_G0035024.1 mouse_genomes_project 9 73237665 73241080 - Pigb protein_coding retained_intron MGP_129S1SvImJ_T0093182.1 MGP_129S1SvImJ_G0035024.1 mouse_genomes_project 9 73241751 73243539 - Pigb protein_coding retained_intron MGP_129S1SvImJ_T0002465.1 MGP_129S1SvImJ_G0002374.1 mouse_genomes_project 9 105057495 105059703 + TEC TEC MGP_129S1SvImJ_T0005468.1 MGP_129S1SvImJ_G0004629.1 mouse_genomes_project 9 53312121 53340990 - Gldnos antisense antisense MGP_129S1SvImJ_T0094242.1 MGP_129S1SvImJ_G0035254.1 mouse_genomes_project 9 109414507 109417366 - MGP_129S1SvImJ_P0094242 Cyb561d2 protein_coding protein_coding MGP_129S1SvImJ_T0094243.1 MGP_129S1SvImJ_G0035254.1 mouse_genomes_project 9 109415075 109417694 - MGP_129S1SvImJ_P0094243 Cyb561d2 protein_coding protein_coding MGP_129S1SvImJ_T0094244.1 MGP_129S1SvImJ_G0035254.1 mouse_genomes_project 9 109415081 109417025 - MGP_129S1SvImJ_P0094244 Cyb561d2 protein_coding protein_coding MGP_129S1SvImJ_T0094245.1 MGP_129S1SvImJ_G0035254.1 mouse_genomes_project 9 109415377 109417625 - Cyb561d2 protein_coding processed_transcript MGP_129S1SvImJ_T0094246.1 MGP_129S1SvImJ_G0035254.1 mouse_genomes_project 9 109415542 109417628 - MGP_129S1SvImJ_P0094246 Cyb561d2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0016146.1 MGP_129S1SvImJ_G0014235.1 mouse_genomes_project 9 101830633 101830898 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009288.1 MGP_129S1SvImJ_G0007465.1 mouse_genomes_project 9 80686734 80689921 - Gm17477 lincRNA lincRNA MGP_129S1SvImJ_T0091341.1 MGP_129S1SvImJ_G0034422.1 mouse_genomes_project 9 17765011 17785580 - MGP_129S1SvImJ_P0091341 Fbxl12 protein_coding protein_coding MGP_129S1SvImJ_T0091342.1 MGP_129S1SvImJ_G0034422.1 mouse_genomes_project 9 17765123 17788023 - Fbxl12 protein_coding processed_transcript MGP_129S1SvImJ_T0091343.1 MGP_129S1SvImJ_G0034422.1 mouse_genomes_project 9 17779885 17788035 - MGP_129S1SvImJ_P0091343 Fbxl12 protein_coding protein_coding MGP_129S1SvImJ_T0091344.1 MGP_129S1SvImJ_G0034422.1 mouse_genomes_project 9 17779922 17781478 - MGP_129S1SvImJ_P0091344 Fbxl12 protein_coding protein_coding MGP_129S1SvImJ_T0091345.1 MGP_129S1SvImJ_G0034422.1 mouse_genomes_project 9 17779922 17788023 - MGP_129S1SvImJ_P0091345 Fbxl12 protein_coding protein_coding MGP_129S1SvImJ_T0091346.1 MGP_129S1SvImJ_G0034422.1 mouse_genomes_project 9 17779923 17788035 - MGP_129S1SvImJ_P0091346 Fbxl12 protein_coding protein_coding MGP_129S1SvImJ_T0091347.1 MGP_129S1SvImJ_G0034422.1 mouse_genomes_project 9 17779925 17788047 - MGP_129S1SvImJ_P0091347 Fbxl12 protein_coding protein_coding MGP_129S1SvImJ_T0091348.1 MGP_129S1SvImJ_G0034422.1 mouse_genomes_project 9 17779925 17786073 - MGP_129S1SvImJ_P0091348 Fbxl12 protein_coding protein_coding MGP_129S1SvImJ_T0091349.1 MGP_129S1SvImJ_G0034422.1 mouse_genomes_project 9 17780938 17788038 - MGP_129S1SvImJ_P0091349 Fbxl12 protein_coding protein_coding MGP_129S1SvImJ_T0091350.1 MGP_129S1SvImJ_G0034422.1 mouse_genomes_project 9 17784829 17788018 - Fbxl12 protein_coding retained_intron MGP_129S1SvImJ_T0005547.1 MGP_129S1SvImJ_G0004683.1 mouse_genomes_project 9 108741795 108744090 + 4930524O07Rik antisense antisense MGP_129S1SvImJ_T0005548.1 MGP_129S1SvImJ_G0004683.1 mouse_genomes_project 9 108742419 108744088 + 4930524O07Rik antisense antisense MGP_129S1SvImJ_T0005549.1 MGP_129S1SvImJ_G0004683.1 mouse_genomes_project 9 108742862 108745437 + 4930524O07Rik antisense antisense MGP_129S1SvImJ_T0018586.1 MGP_129S1SvImJ_G0015747.1 mouse_genomes_project 9 80334262 80343882 + 4930429F24Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0094086.1 MGP_129S1SvImJ_G0035223.1 mouse_genomes_project 9 107984932 108000159 + MGP_129S1SvImJ_P0094086 Twf2 protein_coding protein_coding MGP_129S1SvImJ_T0094087.1 MGP_129S1SvImJ_G0035223.1 mouse_genomes_project 9 107984961 107997013 + MGP_129S1SvImJ_P0094087 Twf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094088.1 MGP_129S1SvImJ_G0035223.1 mouse_genomes_project 9 107984969 107997592 + MGP_129S1SvImJ_P0094088 Twf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094089.1 MGP_129S1SvImJ_G0035223.1 mouse_genomes_project 9 107990036 108000157 + MGP_129S1SvImJ_P0094089 Twf2 protein_coding protein_coding MGP_129S1SvImJ_T0094090.1 MGP_129S1SvImJ_G0035223.1 mouse_genomes_project 9 107998997 107999791 + Twf2 protein_coding retained_intron MGP_129S1SvImJ_T0092031.1 MGP_129S1SvImJ_G0034704.1 mouse_genomes_project 9 42834776 42852708 - MGP_129S1SvImJ_P0092031 Vps11 protein_coding protein_coding MGP_129S1SvImJ_T0005447.1 MGP_129S1SvImJ_G0004615.1 mouse_genomes_project 9 32731318 32742595 - Kirrel3os antisense antisense MGP_129S1SvImJ_T0093156.1 MGP_129S1SvImJ_G0035018.1 mouse_genomes_project 9 72997353 73118584 + MGP_129S1SvImJ_P0093156 Prtg protein_coding protein_coding MGP_129S1SvImJ_T0093157.1 MGP_129S1SvImJ_G0035018.1 mouse_genomes_project 9 73111927 73113606 + Prtg protein_coding retained_intron MGP_129S1SvImJ_T0092867.1 MGP_129S1SvImJ_G0034963.1 mouse_genomes_project 9 65343687 65352345 + MGP_129S1SvImJ_P0092867 Pif1 protein_coding protein_coding MGP_129S1SvImJ_T0092868.1 MGP_129S1SvImJ_G0034963.1 mouse_genomes_project 9 65343709 65344365 + MGP_129S1SvImJ_P0092868 Pif1 protein_coding protein_coding MGP_129S1SvImJ_T0092869.1 MGP_129S1SvImJ_G0034963.1 mouse_genomes_project 9 65343720 65352343 + MGP_129S1SvImJ_P0092869 Pif1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092870.1 MGP_129S1SvImJ_G0034963.1 mouse_genomes_project 9 65343732 65347020 + Pif1 protein_coding retained_intron MGP_129S1SvImJ_T0092871.1 MGP_129S1SvImJ_G0034963.1 mouse_genomes_project 9 65343732 65352348 + MGP_129S1SvImJ_P0092871 Pif1 protein_coding protein_coding MGP_129S1SvImJ_T0092872.1 MGP_129S1SvImJ_G0034963.1 mouse_genomes_project 9 65343740 65352348 + Pif1 protein_coding retained_intron MGP_129S1SvImJ_T0092873.1 MGP_129S1SvImJ_G0034963.1 mouse_genomes_project 9 65343748 65352348 + MGP_129S1SvImJ_P0092873 Pif1 protein_coding protein_coding MGP_129S1SvImJ_T0092874.1 MGP_129S1SvImJ_G0034963.1 mouse_genomes_project 9 65343753 65344808 + MGP_129S1SvImJ_P0092874 Pif1 protein_coding protein_coding MGP_129S1SvImJ_T0009273.1 MGP_129S1SvImJ_G0007451.1 mouse_genomes_project 9 70214106 70245491 - Gm26849 lincRNA lincRNA MGP_129S1SvImJ_T0100220.1 MGP_129S1SvImJ_G0038287.1 mouse_genomes_project 9 121145049 121145130 - Gm22479 snRNA snRNA MGP_129S1SvImJ_T0091943.1 MGP_129S1SvImJ_G0034675.1 mouse_genomes_project 9 40284330 40456092 - MGP_129S1SvImJ_P0091943 Sorl1 protein_coding protein_coding MGP_129S1SvImJ_T0091944.1 MGP_129S1SvImJ_G0034675.1 mouse_genomes_project 9 40289356 40293564 - Sorl1 protein_coding retained_intron MGP_129S1SvImJ_T0091945.1 MGP_129S1SvImJ_G0034675.1 mouse_genomes_project 9 40296564 40303545 - Sorl1 protein_coding retained_intron MGP_129S1SvImJ_T0091946.1 MGP_129S1SvImJ_G0034675.1 mouse_genomes_project 9 40303482 40304812 - Sorl1 protein_coding processed_transcript MGP_129S1SvImJ_T0101491.1 MGP_129S1SvImJ_G0039558.1 mouse_genomes_project 9 106158066 106158208 - Gm25904 snoRNA snoRNA MGP_129S1SvImJ_T0094563.1 MGP_129S1SvImJ_G0035301.1 mouse_genomes_project 9 110450411 110461550 + MGP_129S1SvImJ_P0094563 Usp19 protein_coding protein_coding MGP_129S1SvImJ_T0094564.1 MGP_129S1SvImJ_G0035301.1 mouse_genomes_project 9 110450649 110462188 + MGP_129S1SvImJ_P0094564 Usp19 protein_coding protein_coding MGP_129S1SvImJ_T0094565.1 MGP_129S1SvImJ_G0035301.1 mouse_genomes_project 9 110450654 110462168 + MGP_129S1SvImJ_P0094565 Usp19 protein_coding protein_coding MGP_129S1SvImJ_T0094566.1 MGP_129S1SvImJ_G0035301.1 mouse_genomes_project 9 110450654 110462168 + MGP_129S1SvImJ_P0094566 Usp19 protein_coding protein_coding MGP_129S1SvImJ_T0094567.1 MGP_129S1SvImJ_G0035301.1 mouse_genomes_project 9 110450665 110462168 + MGP_129S1SvImJ_P0094567 Usp19 protein_coding protein_coding MGP_129S1SvImJ_T0094568.1 MGP_129S1SvImJ_G0035301.1 mouse_genomes_project 9 110452501 110454730 + Usp19 protein_coding retained_intron MGP_129S1SvImJ_T0094569.1 MGP_129S1SvImJ_G0035301.1 mouse_genomes_project 9 110453275 110454040 + MGP_129S1SvImJ_P0094569 Usp19 protein_coding protein_coding MGP_129S1SvImJ_T0094570.1 MGP_129S1SvImJ_G0035301.1 mouse_genomes_project 9 110454147 110455000 + Usp19 protein_coding retained_intron MGP_129S1SvImJ_T0094571.1 MGP_129S1SvImJ_G0035301.1 mouse_genomes_project 9 110454176 110455303 + Usp19 protein_coding retained_intron MGP_129S1SvImJ_T0094572.1 MGP_129S1SvImJ_G0035301.1 mouse_genomes_project 9 110454437 110461550 + MGP_129S1SvImJ_P0094572 Usp19 protein_coding protein_coding MGP_129S1SvImJ_T0094573.1 MGP_129S1SvImJ_G0035301.1 mouse_genomes_project 9 110455378 110456319 + Usp19 protein_coding retained_intron MGP_129S1SvImJ_T0094574.1 MGP_129S1SvImJ_G0035301.1 mouse_genomes_project 9 110456202 110458413 + Usp19 protein_coding retained_intron MGP_129S1SvImJ_T0094575.1 MGP_129S1SvImJ_G0035301.1 mouse_genomes_project 9 110456844 110458575 + Usp19 protein_coding retained_intron MGP_129S1SvImJ_T0094576.1 MGP_129S1SvImJ_G0035301.1 mouse_genomes_project 9 110456944 110459053 + MGP_129S1SvImJ_P0094576 Usp19 protein_coding protein_coding MGP_129S1SvImJ_T0094577.1 MGP_129S1SvImJ_G0035301.1 mouse_genomes_project 9 110458558 110459476 + Usp19 protein_coding retained_intron MGP_129S1SvImJ_T0094578.1 MGP_129S1SvImJ_G0035301.1 mouse_genomes_project 9 110460000 110461548 + Usp19 protein_coding retained_intron MGP_129S1SvImJ_T0093832.1 MGP_129S1SvImJ_G0035175.1 mouse_genomes_project 9 101264699 101266764 - MGP_129S1SvImJ_P0093832 Sox14 protein_coding protein_coding MGP_129S1SvImJ_T0093833.1 MGP_129S1SvImJ_G0035175.1 mouse_genomes_project 9 101264813 101266249 - MGP_129S1SvImJ_P0093833 Sox14 protein_coding protein_coding MGP_129S1SvImJ_T0016162.1 MGP_129S1SvImJ_G0014251.1 mouse_genomes_project 9 109039813 109041082 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095186.1 MGP_129S1SvImJ_G0035419.1 mouse_genomes_project 9 122177232 122209698 + MGP_129S1SvImJ_P0095186 Acvr2b protein_coding protein_coding MGP_129S1SvImJ_T0095187.1 MGP_129S1SvImJ_G0035419.1 mouse_genomes_project 9 122177289 122209698 + MGP_129S1SvImJ_P0095187 Acvr2b protein_coding protein_coding MGP_129S1SvImJ_T0095188.1 MGP_129S1SvImJ_G0035419.1 mouse_genomes_project 9 122177334 122209658 + MGP_129S1SvImJ_P0095188 Acvr2b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0011767.1 MGP_129S1SvImJ_G0009883.1 mouse_genomes_project 9 113470440 113470716 - Gm24860 misc_RNA misc_RNA MGP_129S1SvImJ_T0094694.1 MGP_129S1SvImJ_G0035316.1 mouse_genomes_project 9 110857313 110858258 + MGP_129S1SvImJ_P0094694 Tmem89 protein_coding protein_coding MGP_129S1SvImJ_T0094695.1 MGP_129S1SvImJ_G0035316.1 mouse_genomes_project 9 110857313 110858258 + MGP_129S1SvImJ_P0094695 Tmem89 protein_coding protein_coding MGP_129S1SvImJ_T0093297.1 MGP_129S1SvImJ_G0035054.1 mouse_genomes_project 9 78205493 78246989 + MGP_129S1SvImJ_P0093297 Gclc protein_coding protein_coding MGP_129S1SvImJ_T0094270.1 MGP_129S1SvImJ_G0035259.1 mouse_genomes_project 9 109443362 109448192 + MGP_129S1SvImJ_P0094270 Hyal2 protein_coding protein_coding MGP_129S1SvImJ_T0094271.1 MGP_129S1SvImJ_G0035259.1 mouse_genomes_project 9 109443362 109445807 + MGP_129S1SvImJ_P0094271 Hyal2 protein_coding protein_coding MGP_129S1SvImJ_T0094272.1 MGP_129S1SvImJ_G0035259.1 mouse_genomes_project 9 109444529 109448189 + MGP_129S1SvImJ_P0094272 Hyal2 protein_coding protein_coding MGP_129S1SvImJ_T0094273.1 MGP_129S1SvImJ_G0035259.1 mouse_genomes_project 9 109444553 109447376 + MGP_129S1SvImJ_P0094273 Hyal2 protein_coding protein_coding MGP_129S1SvImJ_T0094274.1 MGP_129S1SvImJ_G0035259.1 mouse_genomes_project 9 109444807 109446025 + MGP_129S1SvImJ_P0094274 Hyal2 protein_coding protein_coding MGP_129S1SvImJ_T0094275.1 MGP_129S1SvImJ_G0035259.1 mouse_genomes_project 9 109445217 109448185 + MGP_129S1SvImJ_P0094275 Hyal2 protein_coding protein_coding MGP_129S1SvImJ_T0094276.1 MGP_129S1SvImJ_G0035259.1 mouse_genomes_project 9 109446622 109447616 + Hyal2 protein_coding retained_intron MGP_129S1SvImJ_T0005576.1 MGP_129S1SvImJ_G0004707.1 mouse_genomes_project 9 121605206 121640941 - Gm2415 antisense antisense MGP_129S1SvImJ_T0005577.1 MGP_129S1SvImJ_G0004707.1 mouse_genomes_project 9 121605289 121640951 - Gm2415 antisense antisense MGP_129S1SvImJ_T0005578.1 MGP_129S1SvImJ_G0004707.1 mouse_genomes_project 9 121617551 121640940 - Gm2415 antisense antisense MGP_129S1SvImJ_T0005579.1 MGP_129S1SvImJ_G0004707.1 mouse_genomes_project 9 121639161 121641137 - Gm2415 antisense antisense MGP_129S1SvImJ_T0093499.1 MGP_129S1SvImJ_G0035098.1 mouse_genomes_project 9 87412181 87541982 - MGP_129S1SvImJ_P0093499 Me1 protein_coding protein_coding MGP_129S1SvImJ_T0093500.1 MGP_129S1SvImJ_G0035098.1 mouse_genomes_project 9 87412216 87533473 - MGP_129S1SvImJ_P0093500 Me1 protein_coding protein_coding MGP_129S1SvImJ_T0093501.1 MGP_129S1SvImJ_G0035098.1 mouse_genomes_project 9 87413915 87459974 - Me1 protein_coding processed_transcript MGP_129S1SvImJ_T0093502.1 MGP_129S1SvImJ_G0035098.1 mouse_genomes_project 9 87454788 87460007 - Me1 protein_coding processed_transcript MGP_129S1SvImJ_T0091855.1 MGP_129S1SvImJ_G0034622.1 mouse_genomes_project 9 37100327 37101388 - MGP_129S1SvImJ_P0091855 Olfr146 protein_coding protein_coding MGP_129S1SvImJ_T0092352.1 MGP_129S1SvImJ_G0034804.1 mouse_genomes_project 9 51021647 51063885 + MGP_129S1SvImJ_P0092352 Rdx protein_coding protein_coding MGP_129S1SvImJ_T0092353.1 MGP_129S1SvImJ_G0034804.1 mouse_genomes_project 9 51022436 51063885 + MGP_129S1SvImJ_P0092353 Rdx protein_coding protein_coding MGP_129S1SvImJ_T0092354.1 MGP_129S1SvImJ_G0034804.1 mouse_genomes_project 9 51022436 51049566 + MGP_129S1SvImJ_P0092354 Rdx protein_coding protein_coding MGP_129S1SvImJ_T0016152.1 MGP_129S1SvImJ_G0014241.1 mouse_genomes_project 9 102938297 102939150 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0094007.1 MGP_129S1SvImJ_G0035210.1 mouse_genomes_project 9 106774759 106803221 + MGP_129S1SvImJ_P0094007 Mrpl3 protein_coding protein_coding MGP_129S1SvImJ_T0094008.1 MGP_129S1SvImJ_G0035210.1 mouse_genomes_project 9 106774759 106799801 + MGP_129S1SvImJ_P0094008 Mrpl3 protein_coding protein_coding MGP_129S1SvImJ_T0094009.1 MGP_129S1SvImJ_G0035210.1 mouse_genomes_project 9 106774790 106783444 + MGP_129S1SvImJ_P0094009 Mrpl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094010.1 MGP_129S1SvImJ_G0035210.1 mouse_genomes_project 9 106774790 106777123 + MGP_129S1SvImJ_P0094010 Mrpl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094011.1 MGP_129S1SvImJ_G0035210.1 mouse_genomes_project 9 106774821 106800795 + MGP_129S1SvImJ_P0094011 Mrpl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094012.1 MGP_129S1SvImJ_G0035210.1 mouse_genomes_project 9 106794448 106797393 + Mrpl3 protein_coding retained_intron MGP_129S1SvImJ_T0092161.1 MGP_129S1SvImJ_G0034745.1 mouse_genomes_project 9 44543707 44560726 - MGP_129S1SvImJ_P0092161 Sidt2 protein_coding protein_coding MGP_129S1SvImJ_T0092162.1 MGP_129S1SvImJ_G0034745.1 mouse_genomes_project 9 44543725 44560466 - MGP_129S1SvImJ_P0092162 Sidt2 protein_coding protein_coding MGP_129S1SvImJ_T0092163.1 MGP_129S1SvImJ_G0034745.1 mouse_genomes_project 9 44545155 44546894 - MGP_129S1SvImJ_P0092163 Sidt2 protein_coding protein_coding MGP_129S1SvImJ_T0092164.1 MGP_129S1SvImJ_G0034745.1 mouse_genomes_project 9 44547846 44550156 - Sidt2 protein_coding retained_intron MGP_129S1SvImJ_T0092165.1 MGP_129S1SvImJ_G0034745.1 mouse_genomes_project 9 44548274 44550557 - Sidt2 protein_coding retained_intron MGP_129S1SvImJ_T0092166.1 MGP_129S1SvImJ_G0034745.1 mouse_genomes_project 9 44549096 44552310 - MGP_129S1SvImJ_P0092166 Sidt2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092167.1 MGP_129S1SvImJ_G0034745.1 mouse_genomes_project 9 44549898 44553309 - Sidt2 protein_coding retained_intron MGP_129S1SvImJ_T0092168.1 MGP_129S1SvImJ_G0034745.1 mouse_genomes_project 9 44550726 44553773 - MGP_129S1SvImJ_P0092168 Sidt2 protein_coding protein_coding MGP_129S1SvImJ_T0092169.1 MGP_129S1SvImJ_G0034745.1 mouse_genomes_project 9 44550814 44560660 - MGP_129S1SvImJ_P0092169 Sidt2 protein_coding protein_coding MGP_129S1SvImJ_T0092170.1 MGP_129S1SvImJ_G0034745.1 mouse_genomes_project 9 44550876 44557332 - MGP_129S1SvImJ_P0092170 Sidt2 protein_coding protein_coding MGP_129S1SvImJ_T0092171.1 MGP_129S1SvImJ_G0034745.1 mouse_genomes_project 9 44551192 44557273 - MGP_129S1SvImJ_P0092171 Sidt2 protein_coding protein_coding MGP_129S1SvImJ_T0092172.1 MGP_129S1SvImJ_G0034745.1 mouse_genomes_project 9 44551229 44557505 - MGP_129S1SvImJ_P0092172 Sidt2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092173.1 MGP_129S1SvImJ_G0034745.1 mouse_genomes_project 9 44551264 44553825 - MGP_129S1SvImJ_P0092173 Sidt2 protein_coding protein_coding MGP_129S1SvImJ_T0092174.1 MGP_129S1SvImJ_G0034745.1 mouse_genomes_project 9 44557942 44560713 - Sidt2 protein_coding retained_intron MGP_129S1SvImJ_T0100184.1 MGP_129S1SvImJ_G0038251.1 mouse_genomes_project 9 66195792 66195894 - Gm23428 snRNA snRNA MGP_129S1SvImJ_T0016141.1 MGP_129S1SvImJ_G0014230.1 mouse_genomes_project 9 98487041 98488140 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091465.1 MGP_129S1SvImJ_G0034465.1 mouse_genomes_project 9 19178970 19189672 - MGP_129S1SvImJ_P0091465 Rab3d protein_coding protein_coding MGP_129S1SvImJ_T0091466.1 MGP_129S1SvImJ_G0034465.1 mouse_genomes_project 9 19178989 19189619 - MGP_129S1SvImJ_P0091466 Rab3d protein_coding protein_coding MGP_129S1SvImJ_T0091467.1 MGP_129S1SvImJ_G0034465.1 mouse_genomes_project 9 19180121 19189597 - MGP_129S1SvImJ_P0091467 Rab3d protein_coding protein_coding MGP_129S1SvImJ_T0091468.1 MGP_129S1SvImJ_G0034465.1 mouse_genomes_project 9 19186371 19189569 - MGP_129S1SvImJ_P0091468 Rab3d protein_coding protein_coding MGP_129S1SvImJ_T0091469.1 MGP_129S1SvImJ_G0034465.1 mouse_genomes_project 9 19187094 19189601 - Rab3d protein_coding retained_intron MGP_129S1SvImJ_T0094209.1 MGP_129S1SvImJ_G0035248.1 mouse_genomes_project 9 109111334 109146256 - MGP_129S1SvImJ_P0094209 Mapkapk3 protein_coding protein_coding MGP_129S1SvImJ_T0094210.1 MGP_129S1SvImJ_G0035248.1 mouse_genomes_project 9 109111342 109146126 - Mapkapk3 protein_coding retained_intron MGP_129S1SvImJ_T0094211.1 MGP_129S1SvImJ_G0035248.1 mouse_genomes_project 9 109112452 109113699 - Mapkapk3 protein_coding retained_intron MGP_129S1SvImJ_T0094212.1 MGP_129S1SvImJ_G0035248.1 mouse_genomes_project 9 109112591 109145723 - MGP_129S1SvImJ_P0094212 Mapkapk3 protein_coding protein_coding MGP_129S1SvImJ_T0094213.1 MGP_129S1SvImJ_G0035248.1 mouse_genomes_project 9 109115184 109118332 - Mapkapk3 protein_coding processed_transcript MGP_129S1SvImJ_T0094214.1 MGP_129S1SvImJ_G0035248.1 mouse_genomes_project 9 109115952 109146158 - Mapkapk3 protein_coding retained_intron MGP_129S1SvImJ_T0094215.1 MGP_129S1SvImJ_G0035248.1 mouse_genomes_project 9 109120123 109137378 - MGP_129S1SvImJ_P0094215 Mapkapk3 protein_coding protein_coding MGP_129S1SvImJ_T0094216.1 MGP_129S1SvImJ_G0035248.1 mouse_genomes_project 9 109141093 109146158 - Mapkapk3 protein_coding processed_transcript MGP_129S1SvImJ_T0093561.1 MGP_129S1SvImJ_G0035114.1 mouse_genomes_project 9 89964032 89977943 - MGP_129S1SvImJ_P0093561 protein_coding protein_coding MGP_129S1SvImJ_T0092836.1 MGP_129S1SvImJ_G0034946.1 mouse_genomes_project 9 64655205 64683352 + MGP_129S1SvImJ_P0092836 Vwa9 protein_coding protein_coding MGP_129S1SvImJ_T0092837.1 MGP_129S1SvImJ_G0034946.1 mouse_genomes_project 9 64655310 64683352 + MGP_129S1SvImJ_P0092837 Vwa9 protein_coding protein_coding MGP_129S1SvImJ_T0002409.1 MGP_129S1SvImJ_G0002319.1 mouse_genomes_project 9 74106768 74109870 - TEC TEC MGP_129S1SvImJ_T0101468.1 MGP_129S1SvImJ_G0039535.1 mouse_genomes_project 9 70193940 70194071 - Gm24257 snoRNA snoRNA MGP_129S1SvImJ_T0091522.1 MGP_129S1SvImJ_G0034491.1 mouse_genomes_project 9 21440746 21634013 + MGP_129S1SvImJ_P0091522 Npsr1 protein_coding protein_coding MGP_129S1SvImJ_T0091523.1 MGP_129S1SvImJ_G0034491.1 mouse_genomes_project 9 21440768 21660507 + MGP_129S1SvImJ_P0091523 Npsr1 protein_coding protein_coding MGP_129S1SvImJ_T0091524.1 MGP_129S1SvImJ_G0034491.1 mouse_genomes_project 9 21604419 21657922 + MGP_129S1SvImJ_P0091524 Npsr1 protein_coding protein_coding MGP_129S1SvImJ_T0091525.1 MGP_129S1SvImJ_G0034491.1 mouse_genomes_project 9 21644487 21658980 + Npsr1 protein_coding processed_transcript MGP_129S1SvImJ_T0005450.1 MGP_129S1SvImJ_G0004618.1 mouse_genomes_project 9 38950329 38951356 - Gm16095 antisense antisense MGP_129S1SvImJ_T0093164.1 MGP_129S1SvImJ_G0035023.1 mouse_genomes_project 9 73189065 73222803 + MGP_129S1SvImJ_P0093164 Ccpg1 protein_coding protein_coding MGP_129S1SvImJ_T0093165.1 MGP_129S1SvImJ_G0035023.1 mouse_genomes_project 9 73189140 73208223 + MGP_129S1SvImJ_P0093165 Ccpg1 protein_coding protein_coding MGP_129S1SvImJ_T0093166.1 MGP_129S1SvImJ_G0035023.1 mouse_genomes_project 9 73189214 73220400 + MGP_129S1SvImJ_P0093166 Ccpg1 protein_coding protein_coding MGP_129S1SvImJ_T0093167.1 MGP_129S1SvImJ_G0035023.1 mouse_genomes_project 9 73189222 73191689 + Ccpg1 protein_coding retained_intron MGP_129S1SvImJ_T0093168.1 MGP_129S1SvImJ_G0035023.1 mouse_genomes_project 9 73189241 73222801 + MGP_129S1SvImJ_P0093168 Ccpg1 protein_coding protein_coding MGP_129S1SvImJ_T0093169.1 MGP_129S1SvImJ_G0035023.1 mouse_genomes_project 9 73189241 73222463 + MGP_129S1SvImJ_P0093169 Ccpg1 protein_coding protein_coding MGP_129S1SvImJ_T0093170.1 MGP_129S1SvImJ_G0035023.1 mouse_genomes_project 9 73189244 73208495 + Ccpg1 protein_coding retained_intron MGP_129S1SvImJ_T0093171.1 MGP_129S1SvImJ_G0035023.1 mouse_genomes_project 9 73189255 73220393 + MGP_129S1SvImJ_P0093171 Ccpg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093174.1 MGP_129S1SvImJ_G0035023.1 mouse_genomes_project 9 73216355 73218445 + Ccpg1 protein_coding retained_intron MGP_129S1SvImJ_T0093177.1 MGP_129S1SvImJ_G0035023.1 mouse_genomes_project 9 73221434 73222803 + Ccpg1 protein_coding retained_intron MGP_129S1SvImJ_T0009214.1 MGP_129S1SvImJ_G0007403.1 mouse_genomes_project 9 11807067 11809290 + Gm16302 lincRNA lincRNA MGP_129S1SvImJ_T0005560.1 MGP_129S1SvImJ_G0004691.1 mouse_genomes_project 9 109849996 109851314 - Gm37974 antisense antisense MGP_129S1SvImJ_T0091823.1 MGP_129S1SvImJ_G0034596.1 mouse_genomes_project 9 36452920 36455031 + MGP_129S1SvImJ_P0091823 Olfr147 protein_coding protein_coding MGP_129S1SvImJ_T0100161.1 MGP_129S1SvImJ_G0038228.1 mouse_genomes_project 9 20091396 20091481 - Gm27639 snRNA snRNA MGP_129S1SvImJ_T0092221.1 MGP_129S1SvImJ_G0034760.1 mouse_genomes_project 9 47244855 47256921 - MGP_129S1SvImJ_P0092221 Rexo2 protein_coding protein_coding MGP_129S1SvImJ_T0005503.1 MGP_129S1SvImJ_G0004654.1 mouse_genomes_project 9 82237253 82251499 + D430036J16Rik antisense antisense MGP_129S1SvImJ_T0005504.1 MGP_129S1SvImJ_G0004654.1 mouse_genomes_project 9 82237632 82252026 + D430036J16Rik antisense antisense MGP_129S1SvImJ_T0005505.1 MGP_129S1SvImJ_G0004654.1 mouse_genomes_project 9 82237735 82251065 + D430036J16Rik antisense antisense MGP_129S1SvImJ_T0005506.1 MGP_129S1SvImJ_G0004654.1 mouse_genomes_project 9 82238060 82251955 + D430036J16Rik antisense antisense MGP_129S1SvImJ_T0005507.1 MGP_129S1SvImJ_G0004654.1 mouse_genomes_project 9 82238120 82251222 + D430036J16Rik antisense antisense MGP_129S1SvImJ_T0005570.1 MGP_129S1SvImJ_G0004701.1 mouse_genomes_project 9 113181362 113183037 + 1700061E17Rik antisense antisense MGP_129S1SvImJ_T0093367.1 MGP_129S1SvImJ_G0035077.1 mouse_genomes_project 9 80356824 80525003 - MGP_129S1SvImJ_P0093367 Filip1 protein_coding protein_coding MGP_129S1SvImJ_T0093368.1 MGP_129S1SvImJ_G0035077.1 mouse_genomes_project 9 80356830 80373738 - Filip1 protein_coding processed_transcript MGP_129S1SvImJ_T0093369.1 MGP_129S1SvImJ_G0035077.1 mouse_genomes_project 9 80362440 80509335 - MGP_129S1SvImJ_P0093369 Filip1 protein_coding protein_coding MGP_129S1SvImJ_T0095260.1 MGP_129S1SvImJ_G0035444.1 mouse_genomes_project 9 124585584 124621937 + MGP_129S1SvImJ_P0095260 Vipr1 protein_coding protein_coding MGP_129S1SvImJ_T0095261.1 MGP_129S1SvImJ_G0035444.1 mouse_genomes_project 9 124585919 124607867 + Vipr1 protein_coding processed_transcript MGP_129S1SvImJ_T0095262.1 MGP_129S1SvImJ_G0035444.1 mouse_genomes_project 9 124613597 124614890 + Vipr1 protein_coding retained_intron MGP_129S1SvImJ_T0095263.1 MGP_129S1SvImJ_G0035444.1 mouse_genomes_project 9 124617695 124618492 + Vipr1 protein_coding retained_intron MGP_129S1SvImJ_T0005463.1 MGP_129S1SvImJ_G0004627.1 mouse_genomes_project 9 50785412 50828494 - Arhgap20os antisense antisense MGP_129S1SvImJ_T0005464.1 MGP_129S1SvImJ_G0004627.1 mouse_genomes_project 9 50792105 50828381 - Arhgap20os antisense antisense MGP_129S1SvImJ_T0005465.1 MGP_129S1SvImJ_G0004627.1 mouse_genomes_project 9 50792113 50828493 - Arhgap20os antisense antisense MGP_129S1SvImJ_T0005466.1 MGP_129S1SvImJ_G0004627.1 mouse_genomes_project 9 50792970 50828366 - Arhgap20os antisense antisense MGP_129S1SvImJ_T0002468.1 MGP_129S1SvImJ_G0002377.1 mouse_genomes_project 9 105225671 105227259 - TEC TEC MGP_129S1SvImJ_T0099024.1 MGP_129S1SvImJ_G0037096.1 mouse_genomes_project 9 110341829 110345194 + sense_intronic sense_intronic MGP_129S1SvImJ_T0092726.1 MGP_129S1SvImJ_G0034918.1 mouse_genomes_project 9 61571832 61585190 - MGP_129S1SvImJ_P0092726 Glce protein_coding protein_coding MGP_129S1SvImJ_T0092727.1 MGP_129S1SvImJ_G0034918.1 mouse_genomes_project 9 61571832 61642644 - MGP_129S1SvImJ_P0092727 Glce protein_coding protein_coding MGP_129S1SvImJ_T0092728.1 MGP_129S1SvImJ_G0034918.1 mouse_genomes_project 9 61574596 61585424 - Glce protein_coding retained_intron MGP_129S1SvImJ_T0092729.1 MGP_129S1SvImJ_G0034918.1 mouse_genomes_project 9 61585051 61642689 - MGP_129S1SvImJ_P0092729 Glce protein_coding protein_coding MGP_129S1SvImJ_T0092730.1 MGP_129S1SvImJ_G0034918.1 mouse_genomes_project 9 61594902 61642643 - Glce protein_coding processed_transcript MGP_129S1SvImJ_T0091508.1 MGP_129S1SvImJ_G0034488.1 mouse_genomes_project 9 19774311 19782084 + MGP_129S1SvImJ_P0091508 Gm17545 protein_coding protein_coding MGP_129S1SvImJ_T0093077.1 MGP_129S1SvImJ_G0035011.1 mouse_genomes_project 9 71748774 71904883 - MGP_129S1SvImJ_P0093077 Cgnl1 protein_coding protein_coding MGP_129S1SvImJ_T0093078.1 MGP_129S1SvImJ_G0035011.1 mouse_genomes_project 9 71748774 71904883 - MGP_129S1SvImJ_P0093078 Cgnl1 protein_coding protein_coding MGP_129S1SvImJ_T0093079.1 MGP_129S1SvImJ_G0035011.1 mouse_genomes_project 9 71751124 71753364 - Cgnl1 protein_coding retained_intron MGP_129S1SvImJ_T0093080.1 MGP_129S1SvImJ_G0035011.1 mouse_genomes_project 9 71751476 71904841 - MGP_129S1SvImJ_P0093080 Cgnl1 protein_coding protein_coding MGP_129S1SvImJ_T0093081.1 MGP_129S1SvImJ_G0035011.1 mouse_genomes_project 9 71752592 71753585 - Cgnl1 protein_coding retained_intron MGP_129S1SvImJ_T0093082.1 MGP_129S1SvImJ_G0035011.1 mouse_genomes_project 9 71754891 71770733 - Cgnl1 protein_coding processed_transcript MGP_129S1SvImJ_T0093971.1 MGP_129S1SvImJ_G0035204.1 mouse_genomes_project 9 105695000 105713635 - MGP_129S1SvImJ_P0093971 Uba5 protein_coding protein_coding MGP_129S1SvImJ_T0093972.1 MGP_129S1SvImJ_G0035204.1 mouse_genomes_project 9 105696049 105705180 - MGP_129S1SvImJ_P0093972 Uba5 protein_coding protein_coding MGP_129S1SvImJ_T0093973.1 MGP_129S1SvImJ_G0035204.1 mouse_genomes_project 9 105697983 105713564 - MGP_129S1SvImJ_P0093973 Uba5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093974.1 MGP_129S1SvImJ_G0035204.1 mouse_genomes_project 9 105705762 105710964 - Uba5 protein_coding retained_intron MGP_129S1SvImJ_T0101431.1 MGP_129S1SvImJ_G0039498.1 mouse_genomes_project 9 12298484 12298617 + Gm22620 snoRNA snoRNA MGP_129S1SvImJ_T0095331.1 MGP_129S1SvImJ_G0035468.1 mouse_genomes_project 9 125962540 126034479 + MGP_129S1SvImJ_P0095331 Kif15 protein_coding protein_coding MGP_129S1SvImJ_T0094033.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107138376 107195447 - MGP_129S1SvImJ_P0094033 Atp2c1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094034.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107138376 107256908 - MGP_129S1SvImJ_P0094034 Atp2c1 protein_coding protein_coding MGP_129S1SvImJ_T0094035.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107138383 107228744 - MGP_129S1SvImJ_P0094035 Atp2c1 protein_coding protein_coding MGP_129S1SvImJ_T0094036.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107144161 107229421 - MGP_129S1SvImJ_P0094036 Atp2c1 protein_coding protein_coding MGP_129S1SvImJ_T0094037.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107144541 107229460 - MGP_129S1SvImJ_P0094037 Atp2c1 protein_coding protein_coding MGP_129S1SvImJ_T0094038.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107144542 107257018 - MGP_129S1SvImJ_P0094038 Atp2c1 protein_coding protein_coding MGP_129S1SvImJ_T0094039.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107146104 107172503 - Atp2c1 protein_coding processed_transcript MGP_129S1SvImJ_T0094040.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107147891 107152513 - Atp2c1 protein_coding retained_intron MGP_129S1SvImJ_T0094041.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107154329 107168655 - Atp2c1 protein_coding retained_intron MGP_129S1SvImJ_T0094042.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107157018 107229404 - MGP_129S1SvImJ_P0094042 Atp2c1 protein_coding protein_coding MGP_129S1SvImJ_T0094043.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107171105 107178016 - Atp2c1 protein_coding retained_intron MGP_129S1SvImJ_T0094044.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107180733 107228786 - Atp2c1 protein_coding processed_transcript MGP_129S1SvImJ_T0094045.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107186641 107204747 - MGP_129S1SvImJ_P0094045 Atp2c1 protein_coding protein_coding MGP_129S1SvImJ_T0094046.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107187611 107229374 - MGP_129S1SvImJ_P0094046 Atp2c1 protein_coding protein_coding MGP_129S1SvImJ_T0094047.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107188275 107229822 - Atp2c1 protein_coding retained_intron MGP_129S1SvImJ_T0094048.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107188331 107228937 - MGP_129S1SvImJ_P0094048 Atp2c1 protein_coding protein_coding MGP_129S1SvImJ_T0094049.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107194060 107263077 - Atp2c1 protein_coding processed_transcript MGP_129S1SvImJ_T0094050.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107194060 107229810 - MGP_129S1SvImJ_P0094050 Atp2c1 protein_coding protein_coding MGP_129S1SvImJ_T0094051.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107195433 107229432 - MGP_129S1SvImJ_P0094051 Atp2c1 protein_coding protein_coding MGP_129S1SvImJ_T0094052.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107199036 107228991 - MGP_129S1SvImJ_P0094052 Atp2c1 protein_coding protein_coding MGP_129S1SvImJ_T0094053.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107203459 107229432 - Atp2c1 protein_coding retained_intron MGP_129S1SvImJ_T0094054.1 MGP_129S1SvImJ_G0035215.1 mouse_genomes_project 9 107255762 107257175 - Atp2c1 protein_coding retained_intron MGP_129S1SvImJ_T0092581.1 MGP_129S1SvImJ_G0034884.1 mouse_genomes_project 9 57329123 57410041 + protein_coding retained_intron MGP_129S1SvImJ_T0092584.1 MGP_129S1SvImJ_G0034884.1 mouse_genomes_project 9 57344647 57409232 + MGP_129S1SvImJ_P0092584 protein_coding protein_coding MGP_129S1SvImJ_T0092585.1 MGP_129S1SvImJ_G0034884.1 mouse_genomes_project 9 57344722 57407445 + MGP_129S1SvImJ_P0092585 protein_coding protein_coding MGP_129S1SvImJ_T0092588.1 MGP_129S1SvImJ_G0034884.1 mouse_genomes_project 9 57397512 57408881 + MGP_129S1SvImJ_P0092588 protein_coding protein_coding MGP_129S1SvImJ_T0092589.1 MGP_129S1SvImJ_G0034884.1 mouse_genomes_project 9 57399906 57408454 + MGP_129S1SvImJ_P0092589 protein_coding protein_coding MGP_129S1SvImJ_T0092590.1 MGP_129S1SvImJ_G0034884.1 mouse_genomes_project 9 57402026 57409206 + MGP_129S1SvImJ_P0092590 protein_coding protein_coding MGP_129S1SvImJ_T0092591.1 MGP_129S1SvImJ_G0034884.1 mouse_genomes_project 9 57402084 57409122 + MGP_129S1SvImJ_P0092591 protein_coding protein_coding MGP_129S1SvImJ_T0092592.1 MGP_129S1SvImJ_G0034884.1 mouse_genomes_project 9 57402384 57423719 + MGP_129S1SvImJ_P0092592 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0092593.1 MGP_129S1SvImJ_G0034884.1 mouse_genomes_project 9 57402544 57409128 + MGP_129S1SvImJ_P0092593 protein_coding protein_coding MGP_129S1SvImJ_T0092594.1 MGP_129S1SvImJ_G0034884.1 mouse_genomes_project 9 57402674 57409138 + MGP_129S1SvImJ_P0092594 protein_coding protein_coding MGP_129S1SvImJ_T0092595.1 MGP_129S1SvImJ_G0034884.1 mouse_genomes_project 9 57402819 57407376 + MGP_129S1SvImJ_P0092595 protein_coding protein_coding MGP_129S1SvImJ_T0093296.1 MGP_129S1SvImJ_G0035053.1 mouse_genomes_project 9 78083381 78110450 + MGP_129S1SvImJ_P0093296 Klhl31 protein_coding protein_coding MGP_129S1SvImJ_T0091809.1 MGP_129S1SvImJ_G0034582.1 mouse_genomes_project 9 36109539 36110469 + MGP_129S1SvImJ_P0091809 Olfr885 protein_coding protein_coding MGP_129S1SvImJ_T0005553.1 MGP_129S1SvImJ_G0004687.1 mouse_genomes_project 9 109423061 109426240 - Gm34106 antisense antisense MGP_129S1SvImJ_T0091072.1 MGP_129S1SvImJ_G0034311.1 mouse_genomes_project 9 1138263 1535750 - MGP_129S1SvImJ_P0091072 Gria4 protein_coding protein_coding MGP_129S1SvImJ_T0091073.1 MGP_129S1SvImJ_G0034311.1 mouse_genomes_project 9 1138263 1535750 - MGP_129S1SvImJ_P0091073 Gria4 protein_coding protein_coding MGP_129S1SvImJ_T0091074.1 MGP_129S1SvImJ_G0034311.1 mouse_genomes_project 9 1202491 1535750 - MGP_129S1SvImJ_P0091074 Gria4 protein_coding protein_coding MGP_129S1SvImJ_T0091309.1 MGP_129S1SvImJ_G0034408.1 mouse_genomes_project 9 17156768 17157764 - MGP_129S1SvImJ_P0091309 Olfr867 protein_coding protein_coding MGP_129S1SvImJ_T0092742.1 MGP_129S1SvImJ_G0034921.1 mouse_genomes_project 9 61962497 62074296 - MGP_129S1SvImJ_P0092742 Coro2b protein_coding protein_coding MGP_129S1SvImJ_T0092743.1 MGP_129S1SvImJ_G0034921.1 mouse_genomes_project 9 61968471 61970885 - MGP_129S1SvImJ_P0092743 Coro2b protein_coding protein_coding MGP_129S1SvImJ_T0092744.1 MGP_129S1SvImJ_G0034921.1 mouse_genomes_project 9 61970819 62045434 - MGP_129S1SvImJ_P0092744 Coro2b protein_coding protein_coding MGP_129S1SvImJ_T0092745.1 MGP_129S1SvImJ_G0034921.1 mouse_genomes_project 9 61971146 61972137 - Coro2b protein_coding retained_intron MGP_129S1SvImJ_T0092746.1 MGP_129S1SvImJ_G0034921.1 mouse_genomes_project 9 61972220 61982983 - MGP_129S1SvImJ_P0092746 Coro2b protein_coding protein_coding MGP_129S1SvImJ_T0092747.1 MGP_129S1SvImJ_G0034921.1 mouse_genomes_project 9 61975375 62055221 - MGP_129S1SvImJ_P0092747 Coro2b protein_coding protein_coding MGP_129S1SvImJ_T0092748.1 MGP_129S1SvImJ_G0034921.1 mouse_genomes_project 9 61986754 62074212 - Coro2b protein_coding retained_intron MGP_129S1SvImJ_T0094772.1 MGP_129S1SvImJ_G0035330.1 mouse_genomes_project 9 111278380 111610932 - MGP_129S1SvImJ_P0094772 protein_coding protein_coding MGP_129S1SvImJ_T0091782.1 MGP_129S1SvImJ_G0034565.1 mouse_genomes_project 9 35480074 35521183 + MGP_129S1SvImJ_P0091782 protein_coding protein_coding MGP_129S1SvImJ_T0094091.1 MGP_129S1SvImJ_G0035224.1 mouse_genomes_project 9 108007547 108011832 + MGP_129S1SvImJ_P0094091 Tlr9 protein_coding protein_coding MGP_129S1SvImJ_T0092296.1 MGP_129S1SvImJ_G0034790.1 mouse_genomes_project 9 49664837 49667245 - MGP_129S1SvImJ_P0092296 1110032A03Rik protein_coding protein_coding MGP_129S1SvImJ_T0092297.1 MGP_129S1SvImJ_G0034790.1 mouse_genomes_project 9 49664865 49677910 - 1110032A03Rik protein_coding retained_intron MGP_129S1SvImJ_T0092298.1 MGP_129S1SvImJ_G0034790.1 mouse_genomes_project 9 49664868 49665704 - 1110032A03Rik protein_coding retained_intron MGP_129S1SvImJ_T0092299.1 MGP_129S1SvImJ_G0034790.1 mouse_genomes_project 9 49664979 49669286 - MGP_129S1SvImJ_P0092299 1110032A03Rik protein_coding protein_coding MGP_129S1SvImJ_T0092300.1 MGP_129S1SvImJ_G0034790.1 mouse_genomes_project 9 49664995 49669295 - MGP_129S1SvImJ_P0092300 1110032A03Rik protein_coding protein_coding MGP_129S1SvImJ_T0092301.1 MGP_129S1SvImJ_G0034790.1 mouse_genomes_project 9 49665839 49669233 - 1110032A03Rik protein_coding processed_transcript MGP_129S1SvImJ_T0092302.1 MGP_129S1SvImJ_G0034790.1 mouse_genomes_project 9 49665953 49669304 - 1110032A03Rik protein_coding processed_transcript MGP_129S1SvImJ_T0092306.1 MGP_129S1SvImJ_G0034790.1 mouse_genomes_project 9 49669728 49672171 - 1110032A03Rik protein_coding processed_transcript MGP_129S1SvImJ_T0101779.1 MGP_129S1SvImJ_G0039756.1 mouse_genomes_project 9 57474981 57480887 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101780.1 MGP_129S1SvImJ_G0039756.1 mouse_genomes_project 9 57480116 57480633 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0092835.1 MGP_129S1SvImJ_G0034945.1 mouse_genomes_project 9 64616824 64645564 - MGP_129S1SvImJ_P0092835 Slc24a1 protein_coding protein_coding MGP_129S1SvImJ_T0093470.1 MGP_129S1SvImJ_G0035094.1 mouse_genomes_project 9 87130341 87286902 - MGP_129S1SvImJ_P0093470 Ube2cbp protein_coding protein_coding MGP_129S1SvImJ_T0093471.1 MGP_129S1SvImJ_G0035094.1 mouse_genomes_project 9 87130760 87286902 - MGP_129S1SvImJ_P0093471 Ube2cbp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0100169.1 MGP_129S1SvImJ_G0038236.1 mouse_genomes_project 9 43428778 43428896 + Gm26249 snRNA snRNA MGP_129S1SvImJ_T0095080.1 MGP_129S1SvImJ_G0035389.1 mouse_genomes_project 9 116939845 117001056 - MGP_129S1SvImJ_P0095080 Trim71 protein_coding protein_coding MGP_129S1SvImJ_T0091147.1 MGP_129S1SvImJ_G0034336.1 mouse_genomes_project 9 5771464 5841866 + MGP_129S1SvImJ_P0091147 Pgr protein_coding protein_coding MGP_129S1SvImJ_T0091148.1 MGP_129S1SvImJ_G0034336.1 mouse_genomes_project 9 5772050 5821178 + Pgr protein_coding retained_intron MGP_129S1SvImJ_T0091149.1 MGP_129S1SvImJ_G0034336.1 mouse_genomes_project 9 5772099 5838641 + MGP_129S1SvImJ_P0091149 Pgr protein_coding protein_coding MGP_129S1SvImJ_T0009305.1 MGP_129S1SvImJ_G0007478.1 mouse_genomes_project 9 92349158 92354054 + Gm28652 lincRNA lincRNA MGP_129S1SvImJ_T0091118.1 MGP_129S1SvImJ_G0034328.1 mouse_genomes_project 9 4621165 4652791 + MGP_129S1SvImJ_P0091118 Tmem123 protein_coding protein_coding MGP_129S1SvImJ_T0091119.1 MGP_129S1SvImJ_G0034328.1 mouse_genomes_project 9 4621274 4649506 + MGP_129S1SvImJ_P0091119 Tmem123 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091120.1 MGP_129S1SvImJ_G0034328.1 mouse_genomes_project 9 4621290 4652786 + MGP_129S1SvImJ_P0091120 Tmem123 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092570.1 MGP_129S1SvImJ_G0034881.1 mouse_genomes_project 9 57192912 57217365 + MGP_129S1SvImJ_P0092570 Sema7a protein_coding protein_coding MGP_129S1SvImJ_T0094649.1 MGP_129S1SvImJ_G0035310.1 mouse_genomes_project 9 110642164 110644470 + Slc25a20 protein_coding retained_intron MGP_129S1SvImJ_T0094650.1 MGP_129S1SvImJ_G0035310.1 mouse_genomes_project 9 110642174 110664128 + MGP_129S1SvImJ_P0094650 Slc25a20 protein_coding protein_coding MGP_129S1SvImJ_T0094651.1 MGP_129S1SvImJ_G0035310.1 mouse_genomes_project 9 110651633 110660343 + Slc25a20 protein_coding retained_intron MGP_129S1SvImJ_T0091380.1 MGP_129S1SvImJ_G0034431.1 mouse_genomes_project 9 18063129 18067400 - MGP_129S1SvImJ_P0091380 Eif3g protein_coding protein_coding MGP_129S1SvImJ_T0091826.1 MGP_129S1SvImJ_G0034599.1 mouse_genomes_project 9 36519259 36520192 + MGP_129S1SvImJ_P0091826 Olfr904 protein_coding protein_coding MGP_129S1SvImJ_T0092751.1 MGP_129S1SvImJ_G0034923.1 mouse_genomes_project 9 62350611 62374757 - MGP_129S1SvImJ_P0092751 Fem1b protein_coding protein_coding MGP_129S1SvImJ_T0092040.1 MGP_129S1SvImJ_G0034706.1 mouse_genomes_project 9 42882464 42888468 + MGP_129S1SvImJ_P0092040 Slc37a4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0101486.1 MGP_129S1SvImJ_G0039553.1 mouse_genomes_project 9 101133236 101133363 - Gm23949 snoRNA snoRNA MGP_129S1SvImJ_T0095171.1 MGP_129S1SvImJ_G0035416.1 mouse_genomes_project 9 122098082 122102190 - MGP_129S1SvImJ_P0095171 Myd88 protein_coding protein_coding MGP_129S1SvImJ_T0095172.1 MGP_129S1SvImJ_G0035416.1 mouse_genomes_project 9 122098094 122102151 - Myd88 protein_coding retained_intron MGP_129S1SvImJ_T0095174.1 MGP_129S1SvImJ_G0035416.1 mouse_genomes_project 9 122101838 122103560 - MGP_129S1SvImJ_P0095174 Myd88 protein_coding protein_coding MGP_129S1SvImJ_T0098662.1 MGP_129S1SvImJ_G0036747.1 mouse_genomes_project 9 59436303 59436414 - Gm23668 rRNA rRNA MGP_129S1SvImJ_T0002392.1 MGP_129S1SvImJ_G0002302.1 mouse_genomes_project 9 72177690 72180373 - TEC TEC MGP_129S1SvImJ_T0092223.1 MGP_129S1SvImJ_G0034762.1 mouse_genomes_project 9 47271710 47272330 + MGP_129S1SvImJ_P0092223 Gm5617 protein_coding protein_coding MGP_129S1SvImJ_T0094277.1 MGP_129S1SvImJ_G0035260.1 mouse_genomes_project 9 109457501 109462280 + MGP_129S1SvImJ_P0094277 Hyal1 protein_coding protein_coding MGP_129S1SvImJ_T0094278.1 MGP_129S1SvImJ_G0035260.1 mouse_genomes_project 9 109457512 109460133 + MGP_129S1SvImJ_P0094278 Hyal1 protein_coding protein_coding MGP_129S1SvImJ_T0094279.1 MGP_129S1SvImJ_G0035260.1 mouse_genomes_project 9 109457532 109461553 + MGP_129S1SvImJ_P0094279 Hyal1 protein_coding protein_coding MGP_129S1SvImJ_T0094280.1 MGP_129S1SvImJ_G0035260.1 mouse_genomes_project 9 109457564 109459989 + MGP_129S1SvImJ_P0094280 Hyal1 protein_coding protein_coding MGP_129S1SvImJ_T0094287.1 MGP_129S1SvImJ_G0035260.1 mouse_genomes_project 9 109460167 109462246 + Hyal1 protein_coding retained_intron MGP_129S1SvImJ_T0002406.1 MGP_129S1SvImJ_G0002316.1 mouse_genomes_project 9 73230755 73232599 + TEC TEC MGP_129S1SvImJ_T0016109.1 MGP_129S1SvImJ_G0014198.1 mouse_genomes_project 9 88628722 88629224 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0092461.1 MGP_129S1SvImJ_G0034842.1 mouse_genomes_project 9 54562679 54629158 - MGP_129S1SvImJ_P0092461 Etfa protein_coding protein_coding MGP_129S1SvImJ_T0092462.1 MGP_129S1SvImJ_G0034842.1 mouse_genomes_project 9 54585800 54602938 - Etfa protein_coding processed_transcript MGP_129S1SvImJ_T0092463.1 MGP_129S1SvImJ_G0034842.1 mouse_genomes_project 9 54602161 54629035 - Etfa protein_coding processed_transcript MGP_129S1SvImJ_T0092464.1 MGP_129S1SvImJ_G0034842.1 mouse_genomes_project 9 54604250 54628723 - Etfa protein_coding processed_transcript MGP_129S1SvImJ_T0095311.1 MGP_129S1SvImJ_G0035459.1 mouse_genomes_project 9 125154272 125281572 - MGP_129S1SvImJ_P0095311 Ano10 protein_coding protein_coding MGP_129S1SvImJ_T0095217.1 MGP_129S1SvImJ_G0035432.1 mouse_genomes_project 9 122951593 122960003 + MGP_129S1SvImJ_P0095217 Rpsa protein_coding protein_coding MGP_129S1SvImJ_T0011055.1 MGP_129S1SvImJ_G0009171.1 mouse_genomes_project 9 1090579 1090646 - Gm23992 miRNA miRNA MGP_129S1SvImJ_T0092244.1 MGP_129S1SvImJ_G0034773.1 mouse_genomes_project 9 48265435 48316015 - MGP_129S1SvImJ_P0092244 Ttc12 protein_coding protein_coding MGP_129S1SvImJ_T0092245.1 MGP_129S1SvImJ_G0034773.1 mouse_genomes_project 9 48286037 48316005 - Ttc12 protein_coding retained_intron MGP_129S1SvImJ_T0091822.1 MGP_129S1SvImJ_G0034595.1 mouse_genomes_project 9 36424503 36426078 + MGP_129S1SvImJ_P0091822 Olfr251 protein_coding protein_coding MGP_129S1SvImJ_T0092027.1 MGP_129S1SvImJ_G0034701.1 mouse_genomes_project 9 42808630 42816566 + MGP_129S1SvImJ_P0092027 Dpagt1 protein_coding protein_coding MGP_129S1SvImJ_T0098672.1 MGP_129S1SvImJ_G0036757.1 mouse_genomes_project 9 104609017 104609121 - n-R5s89 rRNA rRNA MGP_129S1SvImJ_T0094757.1 MGP_129S1SvImJ_G0035326.1 mouse_genomes_project 9 111041044 111051063 + MGP_129S1SvImJ_P0094757 Ccdc51 protein_coding protein_coding MGP_129S1SvImJ_T0095348.1 MGP_129S1SvImJ_G0035472.1 mouse_genomes_project 9 126135528 126158266 + MGP_129S1SvImJ_P0095348 Exosc7 protein_coding protein_coding MGP_129S1SvImJ_T0095349.1 MGP_129S1SvImJ_G0035472.1 mouse_genomes_project 9 126135571 126141970 + Exosc7 protein_coding retained_intron MGP_129S1SvImJ_T0095350.1 MGP_129S1SvImJ_G0035472.1 mouse_genomes_project 9 126148527 126153067 + Exosc7 protein_coding processed_transcript MGP_129S1SvImJ_T0091952.1 MGP_129S1SvImJ_G0034678.1 mouse_genomes_project 9 40758209 40818926 - MGP_129S1SvImJ_P0091952 Tbcel protein_coding protein_coding MGP_129S1SvImJ_T0091953.1 MGP_129S1SvImJ_G0034678.1 mouse_genomes_project 9 40758209 40803320 - MGP_129S1SvImJ_P0091953 Tbcel protein_coding protein_coding MGP_129S1SvImJ_T0091954.1 MGP_129S1SvImJ_G0034678.1 mouse_genomes_project 9 40759337 40807194 - MGP_129S1SvImJ_P0091954 Tbcel protein_coding protein_coding MGP_129S1SvImJ_T0091955.1 MGP_129S1SvImJ_G0034678.1 mouse_genomes_project 9 40759909 40774154 - Tbcel protein_coding processed_transcript MGP_129S1SvImJ_T0091956.1 MGP_129S1SvImJ_G0034678.1 mouse_genomes_project 9 40761594 40818933 - MGP_129S1SvImJ_P0091956 Tbcel protein_coding protein_coding MGP_129S1SvImJ_T0091957.1 MGP_129S1SvImJ_G0034678.1 mouse_genomes_project 9 40761708 40818886 - MGP_129S1SvImJ_P0091957 Tbcel protein_coding protein_coding MGP_129S1SvImJ_T0091958.1 MGP_129S1SvImJ_G0034678.1 mouse_genomes_project 9 40795906 40855326 - MGP_129S1SvImJ_P0091958 Tbcel protein_coding protein_coding MGP_129S1SvImJ_T0100175.1 MGP_129S1SvImJ_G0038242.1 mouse_genomes_project 9 49793824 49793930 + Gm25558 snRNA snRNA MGP_129S1SvImJ_T0091168.1 MGP_129S1SvImJ_G0034344.1 mouse_genomes_project 9 10667359 10725545 + MGP_129S1SvImJ_P0091168 Mtmr2 protein_coding protein_coding MGP_129S1SvImJ_T0091169.1 MGP_129S1SvImJ_G0034344.1 mouse_genomes_project 9 10668130 10725545 + MGP_129S1SvImJ_P0091169 Mtmr2 protein_coding protein_coding MGP_129S1SvImJ_T0091170.1 MGP_129S1SvImJ_G0034344.1 mouse_genomes_project 9 10668134 10702593 + Mtmr2 protein_coding processed_transcript MGP_129S1SvImJ_T0091171.1 MGP_129S1SvImJ_G0034344.1 mouse_genomes_project 9 10668146 10725545 + MGP_129S1SvImJ_P0091171 Mtmr2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091172.1 MGP_129S1SvImJ_G0034344.1 mouse_genomes_project 9 10668268 10705107 + MGP_129S1SvImJ_P0091172 Mtmr2 protein_coding protein_coding MGP_129S1SvImJ_T0091173.1 MGP_129S1SvImJ_G0034344.1 mouse_genomes_project 9 10668338 10705107 + MGP_129S1SvImJ_P0091173 Mtmr2 protein_coding protein_coding MGP_129S1SvImJ_T0091174.1 MGP_129S1SvImJ_G0034344.1 mouse_genomes_project 9 10684992 10710932 + MGP_129S1SvImJ_P0091174 Mtmr2 protein_coding protein_coding MGP_129S1SvImJ_T0091175.1 MGP_129S1SvImJ_G0034344.1 mouse_genomes_project 9 10685755 10705105 + Mtmr2 protein_coding processed_transcript MGP_129S1SvImJ_T0091176.1 MGP_129S1SvImJ_G0034344.1 mouse_genomes_project 9 10714865 10725544 + Mtmr2 protein_coding retained_intron MGP_129S1SvImJ_T0005451.1 MGP_129S1SvImJ_G0004619.1 mouse_genomes_project 9 40347881 40360512 + Gm16214 antisense antisense MGP_129S1SvImJ_T0091819.1 MGP_129S1SvImJ_G0034592.1 mouse_genomes_project 9 36370781 36371849 + MGP_129S1SvImJ_P0091819 Olfr25 protein_coding protein_coding MGP_129S1SvImJ_T0011066.1 MGP_129S1SvImJ_G0009182.1 mouse_genomes_project 9 18082633 18082708 - Mir7081 miRNA miRNA MGP_129S1SvImJ_T0011768.1 MGP_129S1SvImJ_G0009884.1 mouse_genomes_project 9 115744583 115744880 + Gm22492 misc_RNA misc_RNA MGP_129S1SvImJ_T0002391.1 MGP_129S1SvImJ_G0002301.1 mouse_genomes_project 9 72147037 72148684 - TEC TEC MGP_129S1SvImJ_T0095126.1 MGP_129S1SvImJ_G0035404.1 mouse_genomes_project 9 120722831 120802995 - MGP_129S1SvImJ_P0095126 Cmc1 protein_coding protein_coding MGP_129S1SvImJ_T0009326.1 MGP_129S1SvImJ_G0007494.1 mouse_genomes_project 9 101884898 101886489 + Gm28166 lincRNA lincRNA MGP_129S1SvImJ_T0095333.1 MGP_129S1SvImJ_G0035470.1 mouse_genomes_project 9 126051635 126052728 + Tgm4 protein_coding processed_transcript MGP_129S1SvImJ_T0095334.1 MGP_129S1SvImJ_G0035470.1 mouse_genomes_project 9 126051637 126067896 + Tgm4 protein_coding processed_transcript MGP_129S1SvImJ_T0095335.1 MGP_129S1SvImJ_G0035470.1 mouse_genomes_project 9 126051637 126085435 + MGP_129S1SvImJ_P0095335 Tgm4 protein_coding protein_coding MGP_129S1SvImJ_T0095336.1 MGP_129S1SvImJ_G0035470.1 mouse_genomes_project 9 126057268 126065468 + Tgm4 protein_coding retained_intron MGP_129S1SvImJ_T0094946.1 MGP_129S1SvImJ_G0035361.1 mouse_genomes_project 9 113045926 113053972 + MGP_129S1SvImJ_P0094946 Prss50 protein_coding protein_coding MGP_129S1SvImJ_T0094947.1 MGP_129S1SvImJ_G0035361.1 mouse_genomes_project 9 113049128 113053971 + MGP_129S1SvImJ_P0094947 Prss50 protein_coding protein_coding MGP_129S1SvImJ_T0016176.1 MGP_129S1SvImJ_G0014265.1 mouse_genomes_project 9 126340833 126341260 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0092632.1 MGP_129S1SvImJ_G0034894.1 mouse_genomes_project 9 57958645 57965133 - Rec114 protein_coding processed_transcript MGP_129S1SvImJ_T0092633.1 MGP_129S1SvImJ_G0034894.1 mouse_genomes_project 9 57958673 57970111 - Rec114 protein_coding processed_transcript MGP_129S1SvImJ_T0092634.1 MGP_129S1SvImJ_G0034894.1 mouse_genomes_project 9 57958676 57966209 - MGP_129S1SvImJ_P0092634 Rec114 protein_coding protein_coding MGP_129S1SvImJ_T0092635.1 MGP_129S1SvImJ_G0034894.1 mouse_genomes_project 9 57958737 58047407 - MGP_129S1SvImJ_P0092635 Rec114 protein_coding protein_coding MGP_129S1SvImJ_T0093267.1 MGP_129S1SvImJ_G0035049.1 mouse_genomes_project 9 76879799 76963596 - MGP_129S1SvImJ_P0093267 Fam83b protein_coding protein_coding MGP_129S1SvImJ_T0093268.1 MGP_129S1SvImJ_G0035049.1 mouse_genomes_project 9 76880450 76938776 - MGP_129S1SvImJ_P0093268 Fam83b protein_coding protein_coding MGP_129S1SvImJ_T0016032.1 MGP_129S1SvImJ_G0014121.1 mouse_genomes_project 9 22218651 22219953 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0093923.1 MGP_129S1SvImJ_G0035193.1 mouse_genomes_project 9 104714397 104769040 + Rab6b protein_coding processed_transcript MGP_129S1SvImJ_T0093924.1 MGP_129S1SvImJ_G0035193.1 mouse_genomes_project 9 104714417 104791669 + MGP_129S1SvImJ_P0093924 Rab6b protein_coding protein_coding MGP_129S1SvImJ_T0005573.1 MGP_129S1SvImJ_G0004704.1 mouse_genomes_project 9 117678264 117683893 - Gm4665 antisense antisense MGP_129S1SvImJ_T0100188.1 MGP_129S1SvImJ_G0038255.1 mouse_genomes_project 9 70600533 70600632 + Gm23588 snRNA snRNA MGP_129S1SvImJ_T0092359.1 MGP_129S1SvImJ_G0034808.1 mouse_genomes_project 9 52311976 52396822 + MGP_129S1SvImJ_P0092359 Exph5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0092360.1 MGP_129S1SvImJ_G0034808.1 mouse_genomes_project 9 52312171 52393170 + MGP_129S1SvImJ_P0092360 Exph5 protein_coding protein_coding MGP_129S1SvImJ_T0092361.1 MGP_129S1SvImJ_G0034808.1 mouse_genomes_project 9 52354217 52384609 + Exph5 protein_coding retained_intron MGP_129S1SvImJ_T0092362.1 MGP_129S1SvImJ_G0034808.1 mouse_genomes_project 9 52354322 52369960 + Exph5 protein_coding retained_intron MGP_129S1SvImJ_T0002457.1 MGP_129S1SvImJ_G0002366.1 mouse_genomes_project 9 102673922 102676617 - TEC TEC MGP_129S1SvImJ_T0091827.1 MGP_129S1SvImJ_G0034600.1 mouse_genomes_project 9 36534057 36534994 + MGP_129S1SvImJ_P0091827 Olfr905 protein_coding protein_coding MGP_129S1SvImJ_T0092834.1 MGP_129S1SvImJ_G0034944.1 mouse_genomes_project 9 64494423 64613631 + MGP_129S1SvImJ_P0092834 Dennd4a protein_coding protein_coding MGP_129S1SvImJ_T0092534.1 MGP_129S1SvImJ_G0034861.1 mouse_genomes_project 9 56326386 56329645 - MGP_129S1SvImJ_P0092534 Commd4 protein_coding protein_coding MGP_129S1SvImJ_T0094198.1 MGP_129S1SvImJ_G0035247.1 mouse_genomes_project 9 108743078 109086995 - MGP_129S1SvImJ_P0094198 Dock3 protein_coding protein_coding MGP_129S1SvImJ_T0094199.1 MGP_129S1SvImJ_G0035247.1 mouse_genomes_project 9 108743359 108765136 - MGP_129S1SvImJ_P0094199 Dock3 protein_coding protein_coding MGP_129S1SvImJ_T0094200.1 MGP_129S1SvImJ_G0035247.1 mouse_genomes_project 9 108747030 108752038 - MGP_129S1SvImJ_P0094200 Dock3 protein_coding protein_coding MGP_129S1SvImJ_T0094201.1 MGP_129S1SvImJ_G0035247.1 mouse_genomes_project 9 108758712 108760766 - Dock3 protein_coding processed_transcript MGP_129S1SvImJ_T0094202.1 MGP_129S1SvImJ_G0035247.1 mouse_genomes_project 9 108763493 108765438 - Dock3 protein_coding retained_intron MGP_129S1SvImJ_T0094203.1 MGP_129S1SvImJ_G0035247.1 mouse_genomes_project 9 108766636 108803235 - MGP_129S1SvImJ_P0094203 Dock3 protein_coding protein_coding MGP_129S1SvImJ_T0094204.1 MGP_129S1SvImJ_G0035247.1 mouse_genomes_project 9 108793589 108819627 - MGP_129S1SvImJ_P0094204 Dock3 protein_coding protein_coding MGP_129S1SvImJ_T0094205.1 MGP_129S1SvImJ_G0035247.1 mouse_genomes_project 9 108879449 108881319 - Dock3 protein_coding retained_intron MGP_129S1SvImJ_T0094206.1 MGP_129S1SvImJ_G0035247.1 mouse_genomes_project 9 108907064 109086954 - Dock3 protein_coding retained_intron MGP_129S1SvImJ_T0094207.1 MGP_129S1SvImJ_G0035247.1 mouse_genomes_project 9 108933404 109086942 - Dock3 protein_coding retained_intron MGP_129S1SvImJ_T0094208.1 MGP_129S1SvImJ_G0035247.1 mouse_genomes_project 9 108956448 109086668 - Dock3 protein_coding retained_intron MGP_129S1SvImJ_T0093784.1 MGP_129S1SvImJ_G0035164.1 mouse_genomes_project 9 100344606 100378584 - MGP_129S1SvImJ_P0093784 Gm1123 protein_coding protein_coding MGP_129S1SvImJ_T0101460.1 MGP_129S1SvImJ_G0039527.1 mouse_genomes_project 9 63821192 63821291 + Snord16a snoRNA snoRNA MGP_129S1SvImJ_T0093869.1 MGP_129S1SvImJ_G0035181.1 mouse_genomes_project 9 102559093 102583770 + MGP_129S1SvImJ_P0093869 Msl2 protein_coding protein_coding MGP_129S1SvImJ_T0093870.1 MGP_129S1SvImJ_G0035181.1 mouse_genomes_project 9 102559753 102585991 + MGP_129S1SvImJ_P0093870 Msl2 protein_coding protein_coding MGP_129S1SvImJ_T0099023.1 MGP_129S1SvImJ_G0037095.1 mouse_genomes_project 9 103705937 103708415 - Gm29388 sense_intronic sense_intronic MGP_129S1SvImJ_T0092394.1 MGP_129S1SvImJ_G0034822.1 mouse_genomes_project 9 53331231 53382125 + MGP_129S1SvImJ_P0092394 Gldn protein_coding protein_coding MGP_129S1SvImJ_T0005455.1 MGP_129S1SvImJ_G0004622.1 mouse_genomes_project 9 43869365 43873143 - 1700003G13Rik antisense antisense MGP_129S1SvImJ_T0005456.1 MGP_129S1SvImJ_G0004622.1 mouse_genomes_project 9 43869366 43873164 - 1700003G13Rik antisense antisense MGP_129S1SvImJ_T0095142.1 MGP_129S1SvImJ_G0035409.1 mouse_genomes_project 9 121766601 121785232 + Vill protein_coding retained_intron MGP_129S1SvImJ_T0095143.1 MGP_129S1SvImJ_G0035409.1 mouse_genomes_project 9 121766601 121771833 + Vill protein_coding retained_intron MGP_129S1SvImJ_T0095144.1 MGP_129S1SvImJ_G0035409.1 mouse_genomes_project 9 121766601 121785226 + MGP_129S1SvImJ_P0095144 Vill protein_coding protein_coding MGP_129S1SvImJ_T0095145.1 MGP_129S1SvImJ_G0035409.1 mouse_genomes_project 9 121766625 121785033 + MGP_129S1SvImJ_P0095145 Vill protein_coding protein_coding MGP_129S1SvImJ_T0095146.1 MGP_129S1SvImJ_G0035409.1 mouse_genomes_project 9 121766688 121772204 + MGP_129S1SvImJ_P0095146 Vill protein_coding protein_coding MGP_129S1SvImJ_T0095147.1 MGP_129S1SvImJ_G0035409.1 mouse_genomes_project 9 121777178 121785033 + MGP_129S1SvImJ_P0095147 Vill protein_coding protein_coding MGP_129S1SvImJ_T0095148.1 MGP_129S1SvImJ_G0035409.1 mouse_genomes_project 9 121777184 121785044 + MGP_129S1SvImJ_P0095148 Vill protein_coding protein_coding MGP_129S1SvImJ_T0095149.1 MGP_129S1SvImJ_G0035409.1 mouse_genomes_project 9 121777185 121783796 + MGP_129S1SvImJ_P0095149 Vill protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095150.1 MGP_129S1SvImJ_G0035409.1 mouse_genomes_project 9 121777188 121780546 + MGP_129S1SvImJ_P0095150 Vill protein_coding protein_coding MGP_129S1SvImJ_T0095151.1 MGP_129S1SvImJ_G0035409.1 mouse_genomes_project 9 121777212 121779074 + Vill protein_coding processed_transcript MGP_129S1SvImJ_T0018628.1 MGP_129S1SvImJ_G0015764.1 mouse_genomes_project 9 119884017 119886178 + Gm17396 processed_transcript processed_transcript MGP_129S1SvImJ_T0094464.1 MGP_129S1SvImJ_G0035283.1 mouse_genomes_project 9 109977729 110012411 - MGP_129S1SvImJ_P0094464 Rnf123 protein_coding protein_coding MGP_129S1SvImJ_T0094465.1 MGP_129S1SvImJ_G0035283.1 mouse_genomes_project 9 109977861 110008366 - MGP_129S1SvImJ_P0094465 Rnf123 protein_coding protein_coding MGP_129S1SvImJ_T0094466.1 MGP_129S1SvImJ_G0035283.1 mouse_genomes_project 9 109977866 110008805 - Rnf123 protein_coding retained_intron MGP_129S1SvImJ_T0094467.1 MGP_129S1SvImJ_G0035283.1 mouse_genomes_project 9 109977866 110008366 - MGP_129S1SvImJ_P0094467 Rnf123 protein_coding protein_coding MGP_129S1SvImJ_T0094468.1 MGP_129S1SvImJ_G0035283.1 mouse_genomes_project 9 109977866 110008440 - MGP_129S1SvImJ_P0094468 Rnf123 protein_coding protein_coding MGP_129S1SvImJ_T0094469.1 MGP_129S1SvImJ_G0035283.1 mouse_genomes_project 9 109977882 109978420 - Rnf123 protein_coding retained_intron MGP_129S1SvImJ_T0094470.1 MGP_129S1SvImJ_G0035283.1 mouse_genomes_project 9 109978414 109985930 - MGP_129S1SvImJ_P0094470 Rnf123 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094471.1 MGP_129S1SvImJ_G0035283.1 mouse_genomes_project 9 109978423 110008440 - MGP_129S1SvImJ_P0094471 Rnf123 protein_coding protein_coding MGP_129S1SvImJ_T0094472.1 MGP_129S1SvImJ_G0035283.1 mouse_genomes_project 9 109978431 109978889 - Rnf123 protein_coding retained_intron MGP_129S1SvImJ_T0094474.1 MGP_129S1SvImJ_G0035283.1 mouse_genomes_project 9 109982093 110008793 - Rnf123 protein_coding retained_intron MGP_129S1SvImJ_T0094475.1 MGP_129S1SvImJ_G0035283.1 mouse_genomes_project 9 109982260 109983234 - Rnf123 protein_coding retained_intron MGP_129S1SvImJ_T0094476.1 MGP_129S1SvImJ_G0035283.1 mouse_genomes_project 9 109982754 109985965 - MGP_129S1SvImJ_P0094476 Rnf123 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094477.1 MGP_129S1SvImJ_G0035283.1 mouse_genomes_project 9 109984361 109988189 - Rnf123 protein_coding retained_intron MGP_129S1SvImJ_T0094478.1 MGP_129S1SvImJ_G0035283.1 mouse_genomes_project 9 110000522 110007326 - MGP_129S1SvImJ_P0094478 Rnf123 protein_coding protein_coding MGP_129S1SvImJ_T0094479.1 MGP_129S1SvImJ_G0035283.1 mouse_genomes_project 9 110000581 110008370 - MGP_129S1SvImJ_P0094479 Rnf123 protein_coding protein_coding MGP_129S1SvImJ_T0094480.1 MGP_129S1SvImJ_G0035283.1 mouse_genomes_project 9 110000808 110008331 - MGP_129S1SvImJ_P0094480 Rnf123 protein_coding protein_coding MGP_129S1SvImJ_T0094481.1 MGP_129S1SvImJ_G0035283.1 mouse_genomes_project 9 110006778 110012409 - MGP_129S1SvImJ_P0094481 Rnf123 protein_coding protein_coding MGP_129S1SvImJ_T0093663.1 MGP_129S1SvImJ_G0035138.1 mouse_genomes_project 9 96891376 96992720 - MGP_129S1SvImJ_P0093663 Pls1 protein_coding protein_coding MGP_129S1SvImJ_T0093664.1 MGP_129S1SvImJ_G0035138.1 mouse_genomes_project 9 96925321 96960946 - MGP_129S1SvImJ_P0093664 Pls1 protein_coding protein_coding MGP_129S1SvImJ_T0093665.1 MGP_129S1SvImJ_G0035138.1 mouse_genomes_project 9 96926694 96992745 - Pls1 protein_coding processed_transcript MGP_129S1SvImJ_T0002418.1 MGP_129S1SvImJ_G0002328.1 mouse_genomes_project 9 86099873 86101714 - TEC TEC MGP_129S1SvImJ_T0091317.1 MGP_129S1SvImJ_G0034416.1 mouse_genomes_project 9 17442719 17478884 - MGP_129S1SvImJ_P0091317 Olfr18 protein_coding protein_coding MGP_129S1SvImJ_T0091476.1 MGP_129S1SvImJ_G0034469.1 mouse_genomes_project 9 19230687 19232337 + MGP_129S1SvImJ_P0091476 Swsap1 protein_coding protein_coding MGP_129S1SvImJ_T0095388.1 MGP_129S1SvImJ_G0035486.1 mouse_genomes_project 9 126981406 126994742 - MGP_129S1SvImJ_P0095388 protein_coding protein_coding MGP_129S1SvImJ_T0095389.1 MGP_129S1SvImJ_G0035486.1 mouse_genomes_project 9 126991765 127002525 - protein_coding processed_transcript MGP_129S1SvImJ_T0095390.1 MGP_129S1SvImJ_G0035486.1 mouse_genomes_project 9 126991765 127002525 - protein_coding processed_transcript MGP_129S1SvImJ_T0095391.1 MGP_129S1SvImJ_G0035486.1 mouse_genomes_project 9 126991765 127000145 - protein_coding processed_transcript MGP_129S1SvImJ_T0095392.1 MGP_129S1SvImJ_G0035486.1 mouse_genomes_project 9 126991765 127000145 - protein_coding processed_transcript MGP_129S1SvImJ_T0095393.1 MGP_129S1SvImJ_G0035486.1 mouse_genomes_project 9 126991765 127000145 - protein_coding processed_transcript MGP_129S1SvImJ_T0093625.1 MGP_129S1SvImJ_G0035128.1 mouse_genomes_project 9 93360052 93380876 + 1700057G04Rik protein_coding processed_transcript MGP_129S1SvImJ_T0093626.1 MGP_129S1SvImJ_G0035128.1 mouse_genomes_project 9 93360052 93397299 + MGP_129S1SvImJ_P0093626 1700057G04Rik protein_coding protein_coding MGP_129S1SvImJ_T0093627.1 MGP_129S1SvImJ_G0035128.1 mouse_genomes_project 9 93360052 93411487 + MGP_129S1SvImJ_P0093627 1700057G04Rik protein_coding protein_coding MGP_129S1SvImJ_T0093628.1 MGP_129S1SvImJ_G0035128.1 mouse_genomes_project 9 93360083 93404687 + 1700057G04Rik protein_coding processed_transcript MGP_129S1SvImJ_T0093629.1 MGP_129S1SvImJ_G0035128.1 mouse_genomes_project 9 93397120 93411430 + MGP_129S1SvImJ_P0093629 1700057G04Rik protein_coding protein_coding MGP_129S1SvImJ_T0093630.1 MGP_129S1SvImJ_G0035128.1 mouse_genomes_project 9 93404700 93411487 + MGP_129S1SvImJ_P0093630 1700057G04Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093269.1 MGP_129S1SvImJ_G0035050.1 mouse_genomes_project 9 77361771 77454147 - MGP_129S1SvImJ_P0093269 Tinag protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093270.1 MGP_129S1SvImJ_G0035050.1 mouse_genomes_project 9 77361771 77454192 - MGP_129S1SvImJ_P0093270 Tinag protein_coding protein_coding MGP_129S1SvImJ_T0093805.1 MGP_129S1SvImJ_G0035169.1 mouse_genomes_project 9 100753923 100808139 - MGP_129S1SvImJ_P0093805 Mras protein_coding protein_coding MGP_129S1SvImJ_T0093806.1 MGP_129S1SvImJ_G0035169.1 mouse_genomes_project 9 100756431 100807639 - MGP_129S1SvImJ_P0093806 Mras protein_coding protein_coding MGP_129S1SvImJ_T0093807.1 MGP_129S1SvImJ_G0035169.1 mouse_genomes_project 9 100756482 100795282 - MGP_129S1SvImJ_P0093807 Mras protein_coding protein_coding MGP_129S1SvImJ_T0093808.1 MGP_129S1SvImJ_G0035169.1 mouse_genomes_project 9 100758236 100763199 - Mras protein_coding retained_intron MGP_129S1SvImJ_T0093809.1 MGP_129S1SvImJ_G0035169.1 mouse_genomes_project 9 100761343 100770830 - Mras protein_coding retained_intron MGP_129S1SvImJ_T0093810.1 MGP_129S1SvImJ_G0035169.1 mouse_genomes_project 9 100761504 100789538 - MGP_129S1SvImJ_P0093810 Mras protein_coding protein_coding MGP_129S1SvImJ_T0011104.1 MGP_129S1SvImJ_G0009220.1 mouse_genomes_project 9 72168669 72168745 + Gm27450 miRNA miRNA MGP_129S1SvImJ_T0005494.1 MGP_129S1SvImJ_G0004646.1 mouse_genomes_project 9 72784251 72787283 - Gm27241 antisense antisense MGP_129S1SvImJ_T0005495.1 MGP_129S1SvImJ_G0004646.1 mouse_genomes_project 9 72784385 72787455 - Gm27241 antisense antisense MGP_129S1SvImJ_T0098409.1 MGP_129S1SvImJ_G0036494.1 mouse_genomes_project 9 68797959 68798393 + pseudogene pseudogene MGP_129S1SvImJ_T0101489.1 MGP_129S1SvImJ_G0039556.1 mouse_genomes_project 9 102886148 102886280 - Gm24638 snoRNA snoRNA MGP_129S1SvImJ_T0016150.1 MGP_129S1SvImJ_G0014239.1 mouse_genomes_project 9 102826613 102826866 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005563.1 MGP_129S1SvImJ_G0004694.1 mouse_genomes_project 9 109928186 109937277 - Gm38134 antisense antisense MGP_129S1SvImJ_T0092159.1 MGP_129S1SvImJ_G0034743.1 mouse_genomes_project 9 44503072 44533978 + MGP_129S1SvImJ_P0092159 Pcsk7 protein_coding protein_coding MGP_129S1SvImJ_T0094636.1 MGP_129S1SvImJ_G0035309.1 mouse_genomes_project 9 110572503 110602340 - MGP_129S1SvImJ_P0094636 Arih2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0094637.1 MGP_129S1SvImJ_G0035309.1 mouse_genomes_project 9 110572506 110628517 - MGP_129S1SvImJ_P0094637 Arih2 protein_coding protein_coding MGP_129S1SvImJ_T0094638.1 MGP_129S1SvImJ_G0035309.1 mouse_genomes_project 9 110572511 110576174 - Arih2 protein_coding retained_intron MGP_129S1SvImJ_T0094639.1 MGP_129S1SvImJ_G0035309.1 mouse_genomes_project 9 110574250 110628522 - MGP_129S1SvImJ_P0094639 Arih2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094640.1 MGP_129S1SvImJ_G0035309.1 mouse_genomes_project 9 110574372 110578257 - MGP_129S1SvImJ_P0094640 Arih2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094641.1 MGP_129S1SvImJ_G0035309.1 mouse_genomes_project 9 110574507 110576919 - Arih2 protein_coding retained_intron MGP_129S1SvImJ_T0094642.1 MGP_129S1SvImJ_G0035309.1 mouse_genomes_project 9 110574838 110577522 - Arih2 protein_coding retained_intron MGP_129S1SvImJ_T0094643.1 MGP_129S1SvImJ_G0035309.1 mouse_genomes_project 9 110579469 110628523 - MGP_129S1SvImJ_P0094643 Arih2 protein_coding protein_coding MGP_129S1SvImJ_T0094644.1 MGP_129S1SvImJ_G0035309.1 mouse_genomes_project 9 110579553 110622117 - MGP_129S1SvImJ_P0094644 Arih2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094645.1 MGP_129S1SvImJ_G0035309.1 mouse_genomes_project 9 110584341 110601666 - Arih2 protein_coding retained_intron MGP_129S1SvImJ_T0094646.1 MGP_129S1SvImJ_G0035309.1 mouse_genomes_project 9 110585341 110628455 - Arih2 protein_coding retained_intron MGP_129S1SvImJ_T0094647.1 MGP_129S1SvImJ_G0035309.1 mouse_genomes_project 9 110586358 110628479 - MGP_129S1SvImJ_P0094647 Arih2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094648.1 MGP_129S1SvImJ_G0035309.1 mouse_genomes_project 9 110622717 110628506 - Arih2 protein_coding retained_intron MGP_129S1SvImJ_T0009359.1 MGP_129S1SvImJ_G0007519.1 mouse_genomes_project 9 122216473 122221026 - 4930516B21Rik lincRNA lincRNA MGP_129S1SvImJ_T0091900.1 MGP_129S1SvImJ_G0034661.1 mouse_genomes_project 9 38291691 38292636 - MGP_129S1SvImJ_P0091900 Olfr984 protein_coding protein_coding MGP_129S1SvImJ_T0002432.1 MGP_129S1SvImJ_G0002341.1 mouse_genomes_project 9 92272595 92275074 - TEC TEC MGP_129S1SvImJ_T0091500.1 MGP_129S1SvImJ_G0034481.1 mouse_genomes_project 9 19485734 19500294 + MGP_129S1SvImJ_P0091500 Zfp872 protein_coding protein_coding MGP_129S1SvImJ_T0091501.1 MGP_129S1SvImJ_G0034481.1 mouse_genomes_project 9 19495237 19498795 + MGP_129S1SvImJ_P0091501 Zfp872 protein_coding protein_coding MGP_129S1SvImJ_T0094354.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109640704 109674001 - MGP_129S1SvImJ_P0094354 Rbm5 protein_coding protein_coding MGP_129S1SvImJ_T0094355.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109640829 109673986 - Rbm5 protein_coding retained_intron MGP_129S1SvImJ_T0094356.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109640830 109662012 - Rbm5 protein_coding retained_intron MGP_129S1SvImJ_T0094357.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109640834 109673985 - MGP_129S1SvImJ_P0094357 Rbm5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094358.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109640834 109673992 - MGP_129S1SvImJ_P0094358 Rbm5 protein_coding protein_coding MGP_129S1SvImJ_T0094359.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109642307 109644630 - MGP_129S1SvImJ_P0094359 Rbm5 protein_coding protein_coding MGP_129S1SvImJ_T0094360.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109643676 109644578 - Rbm5 protein_coding retained_intron MGP_129S1SvImJ_T0094361.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109644612 109651763 - Rbm5 protein_coding retained_intron MGP_129S1SvImJ_T0094362.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109645537 109651652 - Rbm5 protein_coding retained_intron MGP_129S1SvImJ_T0094363.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109646386 109673956 - MGP_129S1SvImJ_P0094363 Rbm5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094364.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109646487 109653655 - MGP_129S1SvImJ_P0094364 Rbm5 protein_coding protein_coding MGP_129S1SvImJ_T0094365.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109652033 109653707 - Rbm5 protein_coding retained_intron MGP_129S1SvImJ_T0094366.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109652240 109655587 - Rbm5 protein_coding retained_intron MGP_129S1SvImJ_T0094367.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109653625 109656099 - Rbm5 protein_coding retained_intron MGP_129S1SvImJ_T0094368.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109653654 109670602 - MGP_129S1SvImJ_P0094368 Rbm5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094369.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109655591 109673977 - MGP_129S1SvImJ_P0094369 Rbm5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094370.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109655595 109658688 - Rbm5 protein_coding retained_intron MGP_129S1SvImJ_T0094371.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109655619 109673500 - MGP_129S1SvImJ_P0094371 Rbm5 protein_coding protein_coding MGP_129S1SvImJ_T0094372.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109659898 109673964 - Rbm5 protein_coding retained_intron MGP_129S1SvImJ_T0094373.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109661767 109673964 - MGP_129S1SvImJ_P0094373 Rbm5 protein_coding protein_coding MGP_129S1SvImJ_T0094374.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109661832 109673950 - MGP_129S1SvImJ_P0094374 Rbm5 protein_coding protein_coding MGP_129S1SvImJ_T0094375.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109668218 109673994 - Rbm5 protein_coding retained_intron MGP_129S1SvImJ_T0094376.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109669731 109673991 - Rbm5 protein_coding retained_intron MGP_129S1SvImJ_T0094377.1 MGP_129S1SvImJ_G0035269.1 mouse_genomes_project 9 109672189 109673964 - Rbm5 protein_coding retained_intron MGP_129S1SvImJ_T0101449.1 MGP_129S1SvImJ_G0039516.1 mouse_genomes_project 9 39044033 39044119 + Snord14c snoRNA snoRNA MGP_129S1SvImJ_T0100219.1 MGP_129S1SvImJ_G0038286.1 mouse_genomes_project 9 117312533 117312637 + Gm23889 snRNA snRNA MGP_129S1SvImJ_T0092959.1 MGP_129S1SvImJ_G0034984.1 mouse_genomes_project 9 66836179 66856447 - MGP_129S1SvImJ_P0092959 Lactb protein_coding protein_coding MGP_129S1SvImJ_T0016042.1 MGP_129S1SvImJ_G0014131.1 mouse_genomes_project 9 33389555 33389844 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091860.1 MGP_129S1SvImJ_G0034627.1 mouse_genomes_project 9 37241026 37270667 + MGP_129S1SvImJ_P0091860 Olfr943 protein_coding protein_coding MGP_129S1SvImJ_T0101497.1 MGP_129S1SvImJ_G0039564.1 mouse_genomes_project 9 112253952 112254078 - Gm23377 snoRNA snoRNA MGP_129S1SvImJ_T0091690.1 MGP_129S1SvImJ_G0034536.1 mouse_genomes_project 9 33351102 33373938 - MGP_129S1SvImJ_P0091690 Ddx25 protein_coding protein_coding MGP_129S1SvImJ_T0018588.1 MGP_129S1SvImJ_G0015749.1 mouse_genomes_project 9 83812123 83813573 + Gm29054 processed_transcript TEC MGP_129S1SvImJ_T0018589.1 MGP_129S1SvImJ_G0015749.1 mouse_genomes_project 9 83812154 83813490 + Gm29054 processed_transcript antisense MGP_129S1SvImJ_T0101476.1 MGP_129S1SvImJ_G0039543.1 mouse_genomes_project 9 86556468 86556598 - Gm22830 snoRNA snoRNA MGP_129S1SvImJ_T0091201.1 MGP_129S1SvImJ_G0034352.1 mouse_genomes_project 9 11646909 11657145 - MGP_129S1SvImJ_P0091201 Piwil4 protein_coding protein_coding MGP_129S1SvImJ_T0091202.1 MGP_129S1SvImJ_G0034352.1 mouse_genomes_project 9 11653852 11694067 - MGP_129S1SvImJ_P0091202 Piwil4 protein_coding protein_coding MGP_129S1SvImJ_T0091203.1 MGP_129S1SvImJ_G0034352.1 mouse_genomes_project 9 11653853 11671821 - MGP_129S1SvImJ_P0091203 Piwil4 protein_coding protein_coding MGP_129S1SvImJ_T0091204.1 MGP_129S1SvImJ_G0034352.1 mouse_genomes_project 9 11654432 11694079 - MGP_129S1SvImJ_P0091204 Piwil4 protein_coding protein_coding MGP_129S1SvImJ_T0093944.1 MGP_129S1SvImJ_G0035198.1 mouse_genomes_project 9 104917673 104964664 + MGP_129S1SvImJ_P0093944 Topbp1 protein_coding protein_coding MGP_129S1SvImJ_T0093945.1 MGP_129S1SvImJ_G0035198.1 mouse_genomes_project 9 104917689 104918450 + Topbp1 protein_coding retained_intron MGP_129S1SvImJ_T0093946.1 MGP_129S1SvImJ_G0035198.1 mouse_genomes_project 9 104917961 104923996 + MGP_129S1SvImJ_P0093946 Topbp1 protein_coding protein_coding MGP_129S1SvImJ_T0093947.1 MGP_129S1SvImJ_G0035198.1 mouse_genomes_project 9 104942322 104951470 + Topbp1 protein_coding retained_intron MGP_129S1SvImJ_T0093948.1 MGP_129S1SvImJ_G0035198.1 mouse_genomes_project 9 104942348 104944151 + Topbp1 protein_coding retained_intron MGP_129S1SvImJ_T0093949.1 MGP_129S1SvImJ_G0035198.1 mouse_genomes_project 9 104947227 104956269 + MGP_129S1SvImJ_P0093949 Topbp1 protein_coding protein_coding MGP_129S1SvImJ_T0093950.1 MGP_129S1SvImJ_G0035198.1 mouse_genomes_project 9 104957861 104960952 + MGP_129S1SvImJ_P0093950 Topbp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093951.1 MGP_129S1SvImJ_G0035198.1 mouse_genomes_project 9 104959831 104961313 + Topbp1 protein_coding retained_intron MGP_129S1SvImJ_T0093952.1 MGP_129S1SvImJ_G0035198.1 mouse_genomes_project 9 104960452 104964137 + Topbp1 protein_coding retained_intron MGP_129S1SvImJ_T0091374.1 MGP_129S1SvImJ_G0034430.1 mouse_genomes_project 9 18057154 18060957 + MGP_129S1SvImJ_P0091374 Ppan protein_coding protein_coding MGP_129S1SvImJ_T0091375.1 MGP_129S1SvImJ_G0034430.1 mouse_genomes_project 9 18057229 18059115 + Ppan protein_coding retained_intron MGP_129S1SvImJ_T0091376.1 MGP_129S1SvImJ_G0034430.1 mouse_genomes_project 9 18057246 18058456 + Ppan protein_coding retained_intron MGP_129S1SvImJ_T0091377.1 MGP_129S1SvImJ_G0034430.1 mouse_genomes_project 9 18057264 18060957 + Ppan protein_coding retained_intron MGP_129S1SvImJ_T0091378.1 MGP_129S1SvImJ_G0034430.1 mouse_genomes_project 9 18059418 18060135 + Ppan protein_coding retained_intron MGP_129S1SvImJ_T0091379.1 MGP_129S1SvImJ_G0034430.1 mouse_genomes_project 9 18059987 18060463 + Ppan protein_coding retained_intron MGP_129S1SvImJ_T0018629.1 MGP_129S1SvImJ_G0015765.1 mouse_genomes_project 9 125367008 125386348 - A730085K08Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0091102.1 MGP_129S1SvImJ_G0034320.1 mouse_genomes_project 9 4203271 4208678 + MGP_129S1SvImJ_P0091102 Mmp12 protein_coding protein_coding MGP_129S1SvImJ_T0091103.1 MGP_129S1SvImJ_G0034320.1 mouse_genomes_project 9 4206264 4229802 + MGP_129S1SvImJ_P0091103 Mmp12 protein_coding protein_coding MGP_129S1SvImJ_T0091104.1 MGP_129S1SvImJ_G0034320.1 mouse_genomes_project 9 4206264 4220776 + MGP_129S1SvImJ_P0091104 Mmp12 protein_coding protein_coding MGP_129S1SvImJ_T0091105.1 MGP_129S1SvImJ_G0034320.1 mouse_genomes_project 9 4206296 4217978 + Mmp12 protein_coding retained_intron MGP_129S1SvImJ_T0091106.1 MGP_129S1SvImJ_G0034320.1 mouse_genomes_project 9 4206296 4207224 + Mmp12 protein_coding processed_transcript MGP_129S1SvImJ_T0091107.1 MGP_129S1SvImJ_G0034320.1 mouse_genomes_project 9 4206296 4219203 + MGP_129S1SvImJ_P0091107 Mmp12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091108.1 MGP_129S1SvImJ_G0034320.1 mouse_genomes_project 9 4206405 4218642 + MGP_129S1SvImJ_P0091108 Mmp12 protein_coding protein_coding MGP_129S1SvImJ_T0091902.1 MGP_129S1SvImJ_G0034663.1 mouse_genomes_project 9 38344992 38347746 + MGP_129S1SvImJ_P0091902 Tmem225 protein_coding protein_coding MGP_129S1SvImJ_T0093800.1 MGP_129S1SvImJ_G0035168.1 mouse_genomes_project 9 100674949 100725686 - MGP_129S1SvImJ_P0093800 Esyt3 protein_coding protein_coding MGP_129S1SvImJ_T0093801.1 MGP_129S1SvImJ_G0035168.1 mouse_genomes_project 9 100683181 100687125 - Esyt3 protein_coding retained_intron MGP_129S1SvImJ_T0093802.1 MGP_129S1SvImJ_G0035168.1 mouse_genomes_project 9 100683225 100689432 - MGP_129S1SvImJ_P0093802 Esyt3 protein_coding protein_coding MGP_129S1SvImJ_T0093803.1 MGP_129S1SvImJ_G0035168.1 mouse_genomes_project 9 100697234 100706097 - Esyt3 protein_coding retained_intron MGP_129S1SvImJ_T0093804.1 MGP_129S1SvImJ_G0035168.1 mouse_genomes_project 9 100722766 100725725 - Esyt3 protein_coding retained_intron MGP_129S1SvImJ_T0095312.1 MGP_129S1SvImJ_G0035460.1 mouse_genomes_project 9 125337300 125367958 + MGP_129S1SvImJ_P0095312 Abhd5 protein_coding protein_coding MGP_129S1SvImJ_T0095313.1 MGP_129S1SvImJ_G0035460.1 mouse_genomes_project 9 125337422 125367958 + MGP_129S1SvImJ_P0095313 Abhd5 protein_coding protein_coding MGP_129S1SvImJ_T0095314.1 MGP_129S1SvImJ_G0035460.1 mouse_genomes_project 9 125337422 125366259 + MGP_129S1SvImJ_P0095314 Abhd5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095315.1 MGP_129S1SvImJ_G0035460.1 mouse_genomes_project 9 125337424 125344898 + Abhd5 protein_coding processed_transcript MGP_129S1SvImJ_T0095316.1 MGP_129S1SvImJ_G0035460.1 mouse_genomes_project 9 125337424 125364366 + MGP_129S1SvImJ_P0095316 Abhd5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095317.1 MGP_129S1SvImJ_G0035460.1 mouse_genomes_project 9 125350086 125354695 + MGP_129S1SvImJ_P0095317 Abhd5 protein_coding protein_coding MGP_129S1SvImJ_T0093140.1 MGP_129S1SvImJ_G0035016.1 mouse_genomes_project 9 72699380 72773998 + Rfx7 protein_coding processed_transcript MGP_129S1SvImJ_T0093141.1 MGP_129S1SvImJ_G0035016.1 mouse_genomes_project 9 72699473 72790311 + MGP_129S1SvImJ_P0093141 Rfx7 protein_coding protein_coding MGP_129S1SvImJ_T0093142.1 MGP_129S1SvImJ_G0035016.1 mouse_genomes_project 9 72699746 72782885 + MGP_129S1SvImJ_P0093142 Rfx7 protein_coding protein_coding MGP_129S1SvImJ_T0093143.1 MGP_129S1SvImJ_G0035016.1 mouse_genomes_project 9 72699878 72782948 + MGP_129S1SvImJ_P0093143 Rfx7 protein_coding protein_coding MGP_129S1SvImJ_T0093144.1 MGP_129S1SvImJ_G0035016.1 mouse_genomes_project 9 72768610 72771368 + Rfx7 protein_coding retained_intron MGP_129S1SvImJ_T0093145.1 MGP_129S1SvImJ_G0035016.1 mouse_genomes_project 9 72780868 72782936 + Rfx7 protein_coding retained_intron MGP_129S1SvImJ_T0099019.1 MGP_129S1SvImJ_G0037091.1 mouse_genomes_project 9 39880938 39881248 + Gm28119 sense_intronic sense_intronic MGP_129S1SvImJ_T0094776.1 MGP_129S1SvImJ_G0035333.1 mouse_genomes_project 9 111594238 111681631 - MGP_129S1SvImJ_P0094776 protein_coding protein_coding MGP_129S1SvImJ_T0002430.1 MGP_129S1SvImJ_G0002339.1 mouse_genomes_project 9 91097884 91101243 - TEC TEC MGP_129S1SvImJ_T0093505.1 MGP_129S1SvImJ_G0035100.1 mouse_genomes_project 9 87618787 87736800 - MGP_129S1SvImJ_P0093505 Snap91 protein_coding protein_coding MGP_129S1SvImJ_T0093506.1 MGP_129S1SvImJ_G0035100.1 mouse_genomes_project 9 87618797 87664072 - Snap91 protein_coding retained_intron MGP_129S1SvImJ_T0093507.1 MGP_129S1SvImJ_G0035100.1 mouse_genomes_project 9 87618800 87736810 - MGP_129S1SvImJ_P0093507 Snap91 protein_coding protein_coding MGP_129S1SvImJ_T0093508.1 MGP_129S1SvImJ_G0035100.1 mouse_genomes_project 9 87618800 87736810 - MGP_129S1SvImJ_P0093508 Snap91 protein_coding protein_coding MGP_129S1SvImJ_T0093509.1 MGP_129S1SvImJ_G0035100.1 mouse_genomes_project 9 87619542 87736775 - MGP_129S1SvImJ_P0093509 Snap91 protein_coding protein_coding MGP_129S1SvImJ_T0093510.1 MGP_129S1SvImJ_G0035100.1 mouse_genomes_project 9 87628252 87654017 - Snap91 protein_coding retained_intron MGP_129S1SvImJ_T0093511.1 MGP_129S1SvImJ_G0035100.1 mouse_genomes_project 9 87647908 87654191 - Snap91 protein_coding retained_intron MGP_129S1SvImJ_T0093512.1 MGP_129S1SvImJ_G0035100.1 mouse_genomes_project 9 87661799 87684581 - Snap91 protein_coding processed_transcript MGP_129S1SvImJ_T0093513.1 MGP_129S1SvImJ_G0035100.1 mouse_genomes_project 9 87678204 87737015 - Snap91 protein_coding retained_intron MGP_129S1SvImJ_T0093514.1 MGP_129S1SvImJ_G0035100.1 mouse_genomes_project 9 87690367 87736758 - MGP_129S1SvImJ_P0093514 Snap91 protein_coding protein_coding MGP_129S1SvImJ_T0016126.1 MGP_129S1SvImJ_G0014215.1 mouse_genomes_project 9 93745684 93746498 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091161.1 MGP_129S1SvImJ_G0034341.1 mouse_genomes_project 9 10243951 10285780 + MGP_129S1SvImJ_P0091161 Ccdc82 protein_coding protein_coding MGP_129S1SvImJ_T0091162.1 MGP_129S1SvImJ_G0034341.1 mouse_genomes_project 9 10243964 10250522 + MGP_129S1SvImJ_P0091162 Ccdc82 protein_coding protein_coding MGP_129S1SvImJ_T0091405.1 MGP_129S1SvImJ_G0034446.1 mouse_genomes_project 9 18461029 18470096 + MGP_129S1SvImJ_P0091405 Atg4d protein_coding protein_coding MGP_129S1SvImJ_T0094100.1 MGP_129S1SvImJ_G0035226.1 mouse_genomes_project 9 108079891 108148674 + MGP_129S1SvImJ_P0094100 Poc1a protein_coding protein_coding MGP_129S1SvImJ_T0094101.1 MGP_129S1SvImJ_G0035226.1 mouse_genomes_project 9 108080210 108148687 + MGP_129S1SvImJ_P0094101 Poc1a protein_coding protein_coding MGP_129S1SvImJ_T0094102.1 MGP_129S1SvImJ_G0035226.1 mouse_genomes_project 9 108089681 108149408 + Poc1a protein_coding processed_transcript MGP_129S1SvImJ_T0094103.1 MGP_129S1SvImJ_G0035226.1 mouse_genomes_project 9 108099574 108148672 + Poc1a protein_coding processed_transcript MGP_129S1SvImJ_T0094104.1 MGP_129S1SvImJ_G0035226.1 mouse_genomes_project 9 108126292 108148673 + Poc1a protein_coding processed_transcript MGP_129S1SvImJ_T0016104.1 MGP_129S1SvImJ_G0014193.1 mouse_genomes_project 9 85716176 85721684 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095103.1 MGP_129S1SvImJ_G0035401.1 mouse_genomes_project 9 119165163 119883945 - MGP_129S1SvImJ_P0095103 Rbms3 protein_coding protein_coding MGP_129S1SvImJ_T0095104.1 MGP_129S1SvImJ_G0035401.1 mouse_genomes_project 9 119169716 119883961 - MGP_129S1SvImJ_P0095104 Rbms3 protein_coding protein_coding MGP_129S1SvImJ_T0095105.1 MGP_129S1SvImJ_G0035401.1 mouse_genomes_project 9 119169999 119426399 - MGP_129S1SvImJ_P0095105 Rbms3 protein_coding protein_coding MGP_129S1SvImJ_T0095106.1 MGP_129S1SvImJ_G0035401.1 mouse_genomes_project 9 119170442 119883608 - MGP_129S1SvImJ_P0095106 Rbms3 protein_coding protein_coding MGP_129S1SvImJ_T0095107.1 MGP_129S1SvImJ_G0035401.1 mouse_genomes_project 9 119170442 120285127 - MGP_129S1SvImJ_P0095107 Rbms3 protein_coding protein_coding MGP_129S1SvImJ_T0095108.1 MGP_129S1SvImJ_G0035401.1 mouse_genomes_project 9 119170443 119883599 - MGP_129S1SvImJ_P0095108 Rbms3 protein_coding protein_coding MGP_129S1SvImJ_T0095109.1 MGP_129S1SvImJ_G0035401.1 mouse_genomes_project 9 119170941 119883965 - MGP_129S1SvImJ_P0095109 Rbms3 protein_coding protein_coding MGP_129S1SvImJ_T0095110.1 MGP_129S1SvImJ_G0035401.1 mouse_genomes_project 9 119175238 119426412 - MGP_129S1SvImJ_P0095110 Rbms3 protein_coding protein_coding MGP_129S1SvImJ_T0095111.1 MGP_129S1SvImJ_G0035401.1 mouse_genomes_project 9 119272290 119883964 - Rbms3 protein_coding retained_intron MGP_129S1SvImJ_T0095112.1 MGP_129S1SvImJ_G0035401.1 mouse_genomes_project 9 119408950 119883283 - MGP_129S1SvImJ_P0095112 Rbms3 protein_coding protein_coding MGP_129S1SvImJ_T0095113.1 MGP_129S1SvImJ_G0035401.1 mouse_genomes_project 9 119452345 119883961 - Rbms3 protein_coding processed_transcript MGP_129S1SvImJ_T0095114.1 MGP_129S1SvImJ_G0035401.1 mouse_genomes_project 9 119550305 119883079 - Rbms3 protein_coding processed_transcript MGP_129S1SvImJ_T0091291.1 MGP_129S1SvImJ_G0034390.1 mouse_genomes_project 9 16386706 16387648 + MGP_129S1SvImJ_P0091291 Olfr845 protein_coding protein_coding MGP_129S1SvImJ_T0009328.1 MGP_129S1SvImJ_G0007496.1 mouse_genomes_project 9 103906625 103915412 + Gm26846 lincRNA lincRNA MGP_129S1SvImJ_T0100156.1 MGP_129S1SvImJ_G0038223.1 mouse_genomes_project 9 15735472 15735574 + Gm24546 snRNA snRNA MGP_129S1SvImJ_T0101445.1 MGP_129S1SvImJ_G0039512.1 mouse_genomes_project 9 32945953 32946097 + Gm24262 snoRNA snoRNA MGP_129S1SvImJ_T0092555.1 MGP_129S1SvImJ_G0034877.1 mouse_genomes_project 9 56938387 56989827 + MGP_129S1SvImJ_P0092555 Edc3 protein_coding protein_coding MGP_129S1SvImJ_T0092556.1 MGP_129S1SvImJ_G0034877.1 mouse_genomes_project 9 56938402 56988731 + MGP_129S1SvImJ_P0092556 Edc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092557.1 MGP_129S1SvImJ_G0034877.1 mouse_genomes_project 9 56938414 56945817 + MGP_129S1SvImJ_P0092557 Edc3 protein_coding protein_coding MGP_129S1SvImJ_T0016049.1 MGP_129S1SvImJ_G0014138.1 mouse_genomes_project 9 39958682 39959663 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002425.1 MGP_129S1SvImJ_G0002334.1 mouse_genomes_project 9 88050247 88051323 - TEC TEC MGP_129S1SvImJ_T0016051.1 MGP_129S1SvImJ_G0014140.1 mouse_genomes_project 9 43810898 43811134 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091383.1 MGP_129S1SvImJ_G0034434.1 mouse_genomes_project 9 18176563 18182663 + MGP_129S1SvImJ_P0091383 Mrpl4 protein_coding protein_coding MGP_129S1SvImJ_T0002369.1 MGP_129S1SvImJ_G0002279.1 mouse_genomes_project 9 18470796 18473492 + TEC TEC MGP_129S1SvImJ_T0016149.1 MGP_129S1SvImJ_G0014238.1 mouse_genomes_project 9 102774229 102774635 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009319.1 MGP_129S1SvImJ_G0007487.1 mouse_genomes_project 9 98293659 98314690 - Gm19325 lincRNA lincRNA MGP_129S1SvImJ_T0093970.1 MGP_129S1SvImJ_G0035203.1 mouse_genomes_project 9 105687250 105725496 + MGP_129S1SvImJ_P0093970 Gm28305 protein_coding protein_coding MGP_129S1SvImJ_T0101781.1 MGP_129S1SvImJ_G0039757.1 mouse_genomes_project 9 78932502 78934384 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101782.1 MGP_129S1SvImJ_G0039757.1 mouse_genomes_project 9 78932878 78934964 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101783.1 MGP_129S1SvImJ_G0039757.1 mouse_genomes_project 9 78933429 78936875 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0016066.1 MGP_129S1SvImJ_G0014155.1 mouse_genomes_project 9 70975661 70976504 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009276.1 MGP_129S1SvImJ_G0007454.1 mouse_genomes_project 9 72684990 72698996 - 4930509E16Rik lincRNA lincRNA MGP_129S1SvImJ_T0100174.1 MGP_129S1SvImJ_G0038241.1 mouse_genomes_project 9 48670582 48670689 - Gm25633 snRNA snRNA MGP_129S1SvImJ_T0009298.1 MGP_129S1SvImJ_G0007473.1 mouse_genomes_project 9 89497995 89506624 - Gm29415 lincRNA lincRNA MGP_129S1SvImJ_T0009216.1 MGP_129S1SvImJ_G0007405.1 mouse_genomes_project 9 17755021 17759732 - Gm26521 lincRNA lincRNA MGP_129S1SvImJ_T0098673.1 MGP_129S1SvImJ_G0036758.1 mouse_genomes_project 9 113869159 113869277 - n-R5s90 rRNA rRNA MGP_129S1SvImJ_T0002399.1 MGP_129S1SvImJ_G0002309.1 mouse_genomes_project 9 72865086 72866569 + TEC TEC MGP_129S1SvImJ_T0092236.1 MGP_129S1SvImJ_G0034769.1 mouse_genomes_project 9 47922221 47926124 + Tmprss5 protein_coding retained_intron MGP_129S1SvImJ_T0092237.1 MGP_129S1SvImJ_G0034769.1 mouse_genomes_project 9 47922221 47937019 + MGP_129S1SvImJ_P0092237 Tmprss5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092238.1 MGP_129S1SvImJ_G0034769.1 mouse_genomes_project 9 47922314 47936425 + MGP_129S1SvImJ_P0092238 Tmprss5 protein_coding protein_coding MGP_129S1SvImJ_T0092239.1 MGP_129S1SvImJ_G0034769.1 mouse_genomes_project 9 47922314 47936425 + MGP_129S1SvImJ_P0092239 Tmprss5 protein_coding protein_coding MGP_129S1SvImJ_T0092240.1 MGP_129S1SvImJ_G0034769.1 mouse_genomes_project 9 47928434 47937019 + MGP_129S1SvImJ_P0092240 Tmprss5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094337.1 MGP_129S1SvImJ_G0035267.1 mouse_genomes_project 9 109567689 109572717 - MGP_129S1SvImJ_P0094337 Gnat1 protein_coding protein_coding MGP_129S1SvImJ_T0094338.1 MGP_129S1SvImJ_G0035267.1 mouse_genomes_project 9 109567692 109572639 - Gnat1 protein_coding retained_intron MGP_129S1SvImJ_T0094339.1 MGP_129S1SvImJ_G0035267.1 mouse_genomes_project 9 109568512 109569657 - Gnat1 protein_coding retained_intron MGP_129S1SvImJ_T0094340.1 MGP_129S1SvImJ_G0035267.1 mouse_genomes_project 9 109569460 109571429 - Gnat1 protein_coding processed_transcript MGP_129S1SvImJ_T0094341.1 MGP_129S1SvImJ_G0035267.1 mouse_genomes_project 9 109570146 109572619 - Gnat1 protein_coding retained_intron MGP_129S1SvImJ_T0016147.1 MGP_129S1SvImJ_G0014236.1 mouse_genomes_project 9 102072251 102073243 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0093706.1 MGP_129S1SvImJ_G0035144.1 mouse_genomes_project 9 97669201 97676987 - MGP_129S1SvImJ_P0093706 Rnf7 protein_coding protein_coding MGP_129S1SvImJ_T0093707.1 MGP_129S1SvImJ_G0035144.1 mouse_genomes_project 9 97670018 97676922 - MGP_129S1SvImJ_P0093707 Rnf7 protein_coding protein_coding MGP_129S1SvImJ_T0093708.1 MGP_129S1SvImJ_G0035144.1 mouse_genomes_project 9 97672067 97676900 - Rnf7 protein_coding processed_transcript MGP_129S1SvImJ_T0093775.1 MGP_129S1SvImJ_G0035158.1 mouse_genomes_project 9 100176593 100177693 + MGP_129S1SvImJ_P0093775 protein_coding protein_coding MGP_129S1SvImJ_T0092657.1 MGP_129S1SvImJ_G0034903.1 mouse_genomes_project 9 58972105 59011034 + MGP_129S1SvImJ_P0092657 Parp6 protein_coding protein_coding MGP_129S1SvImJ_T0016025.1 MGP_129S1SvImJ_G0014114.1 mouse_genomes_project 9 11689542 11690070 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091890.1 MGP_129S1SvImJ_G0034651.1 mouse_genomes_project 9 38078153 38079077 + MGP_129S1SvImJ_P0091890 Olfr229 protein_coding protein_coding MGP_129S1SvImJ_T0009315.1 MGP_129S1SvImJ_G0007484.1 mouse_genomes_project 9 95792002 95793613 - Gm29395 lincRNA lincRNA MGP_129S1SvImJ_T0095068.1 MGP_129S1SvImJ_G0035382.1 mouse_genomes_project 9 116354567 116422787 - MGP_129S1SvImJ_P0095068 Fbxl2 protein_coding protein_coding MGP_129S1SvImJ_T0095069.1 MGP_129S1SvImJ_G0035382.1 mouse_genomes_project 9 116368746 116422819 - MGP_129S1SvImJ_P0095069 Fbxl2 protein_coding protein_coding MGP_129S1SvImJ_T0095070.1 MGP_129S1SvImJ_G0035382.1 mouse_genomes_project 9 116370078 116422784 - MGP_129S1SvImJ_P0095070 Fbxl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095071.1 MGP_129S1SvImJ_G0035382.1 mouse_genomes_project 9 116375379 116385555 - Fbxl2 protein_coding retained_intron MGP_129S1SvImJ_T0095072.1 MGP_129S1SvImJ_G0035382.1 mouse_genomes_project 9 116383445 116422832 - Fbxl2 protein_coding retained_intron MGP_129S1SvImJ_T0095073.1 MGP_129S1SvImJ_G0035382.1 mouse_genomes_project 9 116399661 116443185 - Fbxl2 protein_coding processed_transcript MGP_129S1SvImJ_T0009278.1 MGP_129S1SvImJ_G0007456.1 mouse_genomes_project 9 73418325 73502768 + Gm27211 lincRNA lincRNA MGP_129S1SvImJ_T0016112.1 MGP_129S1SvImJ_G0014201.1 mouse_genomes_project 9 89007512 89008098 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0092569.1 MGP_129S1SvImJ_G0034880.1 mouse_genomes_project 9 57162331 57181439 + MGP_129S1SvImJ_P0092569 Ubl7 protein_coding protein_coding MGP_129S1SvImJ_T0092260.1 MGP_129S1SvImJ_G0034781.1 mouse_genomes_project 9 49495619 49503145 - MGP_129S1SvImJ_P0092260 Sdhd protein_coding protein_coding MGP_129S1SvImJ_T0095413.1 MGP_129S1SvImJ_G0035495.1 mouse_genomes_project 9 127586917 127595207 - MGP_129S1SvImJ_P0095413 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0095414.1 MGP_129S1SvImJ_G0035495.1 mouse_genomes_project 9 127589177 127589433 - MGP_129S1SvImJ_P0095414 protein_coding protein_coding MGP_129S1SvImJ_T0091556.1 MGP_129S1SvImJ_G0034502.1 mouse_genomes_project 9 24324938 24366685 - MGP_129S1SvImJ_P0091556 Gm1110 protein_coding protein_coding MGP_129S1SvImJ_T0091256.1 MGP_129S1SvImJ_G0034368.1 mouse_genomes_project 9 12710357 12740124 + MGP_129S1SvImJ_P0091256 Slc36a4 protein_coding protein_coding MGP_129S1SvImJ_T0092649.1 MGP_129S1SvImJ_G0034900.1 mouse_genomes_project 9 58869630 58878774 - MGP_129S1SvImJ_P0092649 Tmem202 protein_coding protein_coding MGP_129S1SvImJ_T0005551.1 MGP_129S1SvImJ_G0004685.1 mouse_genomes_project 9 109287692 109294413 - Gm17141 antisense antisense MGP_129S1SvImJ_T0002379.1 MGP_129S1SvImJ_G0002289.1 mouse_genomes_project 9 32348655 32367820 + TEC TEC MGP_129S1SvImJ_T0016061.1 MGP_129S1SvImJ_G0014150.1 mouse_genomes_project 9 59142042 59142529 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005439.1 MGP_129S1SvImJ_G0004609.1 mouse_genomes_project 9 19495133 19511567 - 1810064F22Rik antisense antisense MGP_129S1SvImJ_T0005440.1 MGP_129S1SvImJ_G0004609.1 mouse_genomes_project 9 19504508 19511588 - 1810064F22Rik antisense antisense MGP_129S1SvImJ_T0005441.1 MGP_129S1SvImJ_G0004609.1 mouse_genomes_project 9 19505068 19506274 - 1810064F22Rik antisense antisense MGP_129S1SvImJ_T0011081.1 MGP_129S1SvImJ_G0009197.1 mouse_genomes_project 9 42819383 42819524 - Gm44335 miRNA miRNA MGP_129S1SvImJ_T0091389.1 MGP_129S1SvImJ_G0034440.1 mouse_genomes_project 9 18256466 18274461 - MGP_129S1SvImJ_P0091389 Raver1 protein_coding protein_coding MGP_129S1SvImJ_T0011074.1 MGP_129S1SvImJ_G0009190.1 mouse_genomes_project 9 29797461 29797587 + Gm44453 miRNA miRNA MGP_129S1SvImJ_T0101440.1 MGP_129S1SvImJ_G0039507.1 mouse_genomes_project 9 21700060 21700155 + Gm22380 snoRNA snoRNA MGP_129S1SvImJ_T0094281.1 MGP_129S1SvImJ_G0035261.1 mouse_genomes_project 9 109459457 109464084 + MGP_129S1SvImJ_P0094281 Nat6 protein_coding protein_coding MGP_129S1SvImJ_T0094282.1 MGP_129S1SvImJ_G0035261.1 mouse_genomes_project 9 109459457 109464084 + MGP_129S1SvImJ_P0094282 Nat6 protein_coding protein_coding MGP_129S1SvImJ_T0094283.1 MGP_129S1SvImJ_G0035261.1 mouse_genomes_project 9 109459457 109464084 + MGP_129S1SvImJ_P0094283 Nat6 protein_coding protein_coding MGP_129S1SvImJ_T0094284.1 MGP_129S1SvImJ_G0035261.1 mouse_genomes_project 9 109459457 109464084 + MGP_129S1SvImJ_P0094284 Nat6 protein_coding protein_coding MGP_129S1SvImJ_T0094285.1 MGP_129S1SvImJ_G0035261.1 mouse_genomes_project 9 109459457 109464084 + MGP_129S1SvImJ_P0094285 Nat6 protein_coding protein_coding MGP_129S1SvImJ_T0094286.1 MGP_129S1SvImJ_G0035261.1 mouse_genomes_project 9 109459457 109464084 + MGP_129S1SvImJ_P0094286 Nat6 protein_coding protein_coding MGP_129S1SvImJ_T0094288.1 MGP_129S1SvImJ_G0035261.1 mouse_genomes_project 9 109460691 109464615 + MGP_129S1SvImJ_P0094288 Nat6 protein_coding protein_coding MGP_129S1SvImJ_T0091307.1 MGP_129S1SvImJ_G0034406.1 mouse_genomes_project 9 17034371 17034826 - MGP_129S1SvImJ_P0091307 protein_coding protein_coding MGP_129S1SvImJ_T0091566.1 MGP_129S1SvImJ_G0034506.1 mouse_genomes_project 9 24492057 24558463 + MGP_129S1SvImJ_P0091566 Ncapd3 protein_coding protein_coding MGP_129S1SvImJ_T0093363.1 MGP_129S1SvImJ_G0035076.1 mouse_genomes_project 9 80306350 80334052 - MGP_129S1SvImJ_P0093363 Tmem30a protein_coding protein_coding MGP_129S1SvImJ_T0093364.1 MGP_129S1SvImJ_G0035076.1 mouse_genomes_project 9 80306350 80334129 - MGP_129S1SvImJ_P0093364 Tmem30a protein_coding protein_coding MGP_129S1SvImJ_T0093365.1 MGP_129S1SvImJ_G0035076.1 mouse_genomes_project 9 80309932 80334052 - Tmem30a protein_coding retained_intron MGP_129S1SvImJ_T0093366.1 MGP_129S1SvImJ_G0035076.1 mouse_genomes_project 9 80314344 80334052 - Tmem30a protein_coding retained_intron MGP_129S1SvImJ_T0011114.1 MGP_129S1SvImJ_G0009230.1 mouse_genomes_project 9 107933401 107933491 + Mir135a-1 miRNA miRNA MGP_129S1SvImJ_T0002490.1 MGP_129S1SvImJ_G0002399.1 mouse_genomes_project 9 112705233 112707320 + TEC TEC MGP_129S1SvImJ_T0095218.1 MGP_129S1SvImJ_G0035433.1 mouse_genomes_project 9 122977141 122996644 + MGP_129S1SvImJ_P0095218 Mobp protein_coding protein_coding MGP_129S1SvImJ_T0095219.1 MGP_129S1SvImJ_G0035433.1 mouse_genomes_project 9 122977141 123003357 + MGP_129S1SvImJ_P0095219 Mobp protein_coding protein_coding MGP_129S1SvImJ_T0095220.1 MGP_129S1SvImJ_G0035433.1 mouse_genomes_project 9 122977141 123008750 + MGP_129S1SvImJ_P0095220 Mobp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095221.1 MGP_129S1SvImJ_G0035433.1 mouse_genomes_project 9 122977141 123003357 + MGP_129S1SvImJ_P0095221 Mobp protein_coding protein_coding MGP_129S1SvImJ_T0016170.1 MGP_129S1SvImJ_G0014259.1 mouse_genomes_project 9 119672018 119672574 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016168.1 MGP_129S1SvImJ_G0014257.1 mouse_genomes_project 9 112087921 112089125 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0093599.1 MGP_129S1SvImJ_G0035122.1 mouse_genomes_project 9 91149641 91226893 - MGP_129S1SvImJ_P0093599 Tbc1d2b protein_coding protein_coding MGP_129S1SvImJ_T0093600.1 MGP_129S1SvImJ_G0035122.1 mouse_genomes_project 9 91185166 91226928 - MGP_129S1SvImJ_P0093600 Tbc1d2b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093601.1 MGP_129S1SvImJ_G0035122.1 mouse_genomes_project 9 91194364 91226895 - MGP_129S1SvImJ_P0093601 Tbc1d2b protein_coding protein_coding MGP_129S1SvImJ_T0093602.1 MGP_129S1SvImJ_G0035122.1 mouse_genomes_project 9 91197251 91212011 - Tbc1d2b protein_coding processed_transcript MGP_129S1SvImJ_T0092389.1 MGP_129S1SvImJ_G0034818.1 mouse_genomes_project 9 52929013 52929493 + MGP_129S1SvImJ_P0092389 Gm16380 protein_coding protein_coding MGP_129S1SvImJ_T0091538.1 MGP_129S1SvImJ_G0034497.1 mouse_genomes_project 9 22663925 22722674 + MGP_129S1SvImJ_P0091538 Sept7 protein_coding protein_coding MGP_129S1SvImJ_T0091539.1 MGP_129S1SvImJ_G0034497.1 mouse_genomes_project 9 22663925 22722674 + MGP_129S1SvImJ_P0091539 Sept7 protein_coding protein_coding MGP_129S1SvImJ_T0093244.1 MGP_129S1SvImJ_G0035039.1 mouse_genomes_project 9 75754680 75755245 - MGP_129S1SvImJ_P0093244 A130057D12Rik protein_coding protein_coding MGP_129S1SvImJ_T0002433.1 MGP_129S1SvImJ_G0002342.1 mouse_genomes_project 9 92335797 92338229 - TEC TEC MGP_129S1SvImJ_T0094936.1 MGP_129S1SvImJ_G0035356.1 mouse_genomes_project 9 112976095 112981690 + MGP_129S1SvImJ_P0094936 Prss42 protein_coding protein_coding MGP_129S1SvImJ_T0091870.1 MGP_129S1SvImJ_G0034637.1 mouse_genomes_project 9 37719891 37736734 - MGP_129S1SvImJ_P0091870 AW551984 protein_coding protein_coding MGP_129S1SvImJ_T0091871.1 MGP_129S1SvImJ_G0034637.1 mouse_genomes_project 9 37720005 37736296 - MGP_129S1SvImJ_P0091871 AW551984 protein_coding protein_coding MGP_129S1SvImJ_T0091872.1 MGP_129S1SvImJ_G0034637.1 mouse_genomes_project 9 37721457 37723481 - AW551984 protein_coding retained_intron MGP_129S1SvImJ_T0091873.1 MGP_129S1SvImJ_G0034637.1 mouse_genomes_project 9 37723086 37724731 - AW551984 protein_coding retained_intron MGP_129S1SvImJ_T0091874.1 MGP_129S1SvImJ_G0034637.1 mouse_genomes_project 9 37732267 37737013 - MGP_129S1SvImJ_P0091874 AW551984 protein_coding protein_coding MGP_129S1SvImJ_T0091875.1 MGP_129S1SvImJ_G0034637.1 mouse_genomes_project 9 37732904 37736236 - AW551984 protein_coding retained_intron MGP_129S1SvImJ_T0091876.1 MGP_129S1SvImJ_G0034637.1 mouse_genomes_project 9 37733165 37735986 - MGP_129S1SvImJ_P0091876 AW551984 protein_coding protein_coding MGP_129S1SvImJ_T0092357.1 MGP_129S1SvImJ_G0034806.1 mouse_genomes_project 9 51673225 51679599 - MGP_129S1SvImJ_P0092357 AI593442 protein_coding protein_coding MGP_129S1SvImJ_T0011062.1 MGP_129S1SvImJ_G0009178.1 mouse_genomes_project 9 12295906 12295965 + Mir7650 miRNA miRNA MGP_129S1SvImJ_T0018630.1 MGP_129S1SvImJ_G0015766.1 mouse_genomes_project 9 126735508 126760326 + Gm17200 processed_transcript processed_transcript MGP_129S1SvImJ_T0092943.1 MGP_129S1SvImJ_G0034978.1 mouse_genomes_project 9 66572746 66625659 + MGP_129S1SvImJ_P0092943 Car12 protein_coding protein_coding MGP_129S1SvImJ_T0092944.1 MGP_129S1SvImJ_G0034978.1 mouse_genomes_project 9 66572787 66613288 + Car12 protein_coding retained_intron MGP_129S1SvImJ_T0092945.1 MGP_129S1SvImJ_G0034978.1 mouse_genomes_project 9 66572788 66606739 + Car12 protein_coding retained_intron MGP_129S1SvImJ_T0092946.1 MGP_129S1SvImJ_G0034978.1 mouse_genomes_project 9 66572790 66625656 + MGP_129S1SvImJ_P0092946 Car12 protein_coding protein_coding MGP_129S1SvImJ_T0092947.1 MGP_129S1SvImJ_G0034978.1 mouse_genomes_project 9 66606570 66623131 + MGP_129S1SvImJ_P0092947 Car12 protein_coding protein_coding MGP_129S1SvImJ_T0091459.1 MGP_129S1SvImJ_G0034461.1 mouse_genomes_project 9 19008485 19013299 - MGP_129S1SvImJ_P0091459 Spc24 protein_coding protein_coding MGP_129S1SvImJ_T0091964.1 MGP_129S1SvImJ_G0034682.1 mouse_genomes_project 9 41506325 41596631 - MGP_129S1SvImJ_P0091964 Pou2f3 protein_coding protein_coding MGP_129S1SvImJ_T0091965.1 MGP_129S1SvImJ_G0034682.1 mouse_genomes_project 9 41506921 41592209 - MGP_129S1SvImJ_P0091965 Pou2f3 protein_coding protein_coding MGP_129S1SvImJ_T0091236.1 MGP_129S1SvImJ_G0034365.1 mouse_genomes_project 9 12300021 12316499 - MGP_129S1SvImJ_P0091236 Cep295 protein_coding protein_coding MGP_129S1SvImJ_T0091237.1 MGP_129S1SvImJ_G0034365.1 mouse_genomes_project 9 12300021 12341356 - MGP_129S1SvImJ_P0091237 Cep295 protein_coding protein_coding MGP_129S1SvImJ_T0091238.1 MGP_129S1SvImJ_G0034365.1 mouse_genomes_project 9 12300023 12316606 - Cep295 protein_coding retained_intron MGP_129S1SvImJ_T0091239.1 MGP_129S1SvImJ_G0034365.1 mouse_genomes_project 9 12300026 12324201 - Cep295 protein_coding retained_intron MGP_129S1SvImJ_T0091240.1 MGP_129S1SvImJ_G0034365.1 mouse_genomes_project 9 12300107 12341311 - MGP_129S1SvImJ_P0091240 Cep295 protein_coding protein_coding MGP_129S1SvImJ_T0091241.1 MGP_129S1SvImJ_G0034365.1 mouse_genomes_project 9 12300203 12338271 - MGP_129S1SvImJ_P0091241 Cep295 protein_coding protein_coding MGP_129S1SvImJ_T0091242.1 MGP_129S1SvImJ_G0034365.1 mouse_genomes_project 9 12300379 12301064 - Cep295 protein_coding retained_intron MGP_129S1SvImJ_T0091243.1 MGP_129S1SvImJ_G0034365.1 mouse_genomes_project 9 12306105 12309286 - MGP_129S1SvImJ_P0091243 Cep295 protein_coding protein_coding MGP_129S1SvImJ_T0091244.1 MGP_129S1SvImJ_G0034365.1 mouse_genomes_project 9 12308648 12315085 - MGP_129S1SvImJ_P0091244 Cep295 protein_coding protein_coding MGP_129S1SvImJ_T0091245.1 MGP_129S1SvImJ_G0034365.1 mouse_genomes_project 9 12308711 12310183 - Cep295 protein_coding retained_intron MGP_129S1SvImJ_T0091246.1 MGP_129S1SvImJ_G0034365.1 mouse_genomes_project 9 12327037 12334467 - Cep295 protein_coding processed_transcript MGP_129S1SvImJ_T0091247.1 MGP_129S1SvImJ_G0034365.1 mouse_genomes_project 9 12328226 12334997 - Cep295 protein_coding retained_intron MGP_129S1SvImJ_T0091248.1 MGP_129S1SvImJ_G0034365.1 mouse_genomes_project 9 12330148 12335378 - Cep295 protein_coding retained_intron MGP_129S1SvImJ_T0009228.1 MGP_129S1SvImJ_G0007417.1 mouse_genomes_project 9 31777836 31792227 + lincRNA lincRNA MGP_129S1SvImJ_T0101425.1 MGP_129S1SvImJ_G0039492.1 mouse_genomes_project 9 44288 44418 + Gm24918 snoRNA snoRNA MGP_129S1SvImJ_T0101457.1 MGP_129S1SvImJ_G0039524.1 mouse_genomes_project 9 52674357 52674486 + Gm22304 snoRNA snoRNA MGP_129S1SvImJ_T0092619.1 MGP_129S1SvImJ_G0034893.1 mouse_genomes_project 9 57880754 57957114 + MGP_129S1SvImJ_P0092619 Nptn protein_coding protein_coding MGP_129S1SvImJ_T0092620.1 MGP_129S1SvImJ_G0034893.1 mouse_genomes_project 9 57880806 57958674 + MGP_129S1SvImJ_P0092620 Nptn protein_coding protein_coding MGP_129S1SvImJ_T0092621.1 MGP_129S1SvImJ_G0034893.1 mouse_genomes_project 9 57880888 57946471 + MGP_129S1SvImJ_P0092621 Nptn protein_coding non_stop_decay MGP_129S1SvImJ_T0092622.1 MGP_129S1SvImJ_G0034893.1 mouse_genomes_project 9 57880920 57958674 + MGP_129S1SvImJ_P0092622 Nptn protein_coding protein_coding MGP_129S1SvImJ_T0092623.1 MGP_129S1SvImJ_G0034893.1 mouse_genomes_project 9 57880921 57949597 + MGP_129S1SvImJ_P0092623 Nptn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092624.1 MGP_129S1SvImJ_G0034893.1 mouse_genomes_project 9 57880921 57957114 + MGP_129S1SvImJ_P0092624 Nptn protein_coding protein_coding MGP_129S1SvImJ_T0092625.1 MGP_129S1SvImJ_G0034893.1 mouse_genomes_project 9 57880950 57957114 + MGP_129S1SvImJ_P0092625 Nptn protein_coding protein_coding MGP_129S1SvImJ_T0092626.1 MGP_129S1SvImJ_G0034893.1 mouse_genomes_project 9 57880955 57957758 + MGP_129S1SvImJ_P0092626 Nptn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092627.1 MGP_129S1SvImJ_G0034893.1 mouse_genomes_project 9 57880958 57949459 + Nptn protein_coding processed_transcript MGP_129S1SvImJ_T0092628.1 MGP_129S1SvImJ_G0034893.1 mouse_genomes_project 9 57934435 57963777 + MGP_129S1SvImJ_P0092628 Nptn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092629.1 MGP_129S1SvImJ_G0034893.1 mouse_genomes_project 9 57934436 57961001 + MGP_129S1SvImJ_P0092629 Nptn protein_coding protein_coding MGP_129S1SvImJ_T0092630.1 MGP_129S1SvImJ_G0034893.1 mouse_genomes_project 9 57955994 57957853 + Nptn protein_coding retained_intron MGP_129S1SvImJ_T0092631.1 MGP_129S1SvImJ_G0034893.1 mouse_genomes_project 9 57957771 57958614 + Nptn protein_coding processed_transcript MGP_129S1SvImJ_T0101478.1 MGP_129S1SvImJ_G0039545.1 mouse_genomes_project 9 88743965 88744097 - Gm25528 snoRNA snoRNA MGP_129S1SvImJ_T0016063.1 MGP_129S1SvImJ_G0014152.1 mouse_genomes_project 9 63043304 63044214 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091966.1 MGP_129S1SvImJ_G0034683.1 mouse_genomes_project 9 41607727 41626263 - MGP_129S1SvImJ_P0091966 Oaf protein_coding protein_coding MGP_129S1SvImJ_T0018590.1 MGP_129S1SvImJ_G0015750.1 mouse_genomes_project 9 86617078 86640001 - 9330154J02Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018591.1 MGP_129S1SvImJ_G0015750.1 mouse_genomes_project 9 86617078 86640847 - 9330154J02Rik processed_transcript antisense MGP_129S1SvImJ_T0018592.1 MGP_129S1SvImJ_G0015750.1 mouse_genomes_project 9 86617139 86641039 - 9330154J02Rik processed_transcript antisense MGP_129S1SvImJ_T0018593.1 MGP_129S1SvImJ_G0015750.1 mouse_genomes_project 9 86618363 86640000 - 9330154J02Rik processed_transcript retained_intron MGP_129S1SvImJ_T0091540.1 MGP_129S1SvImJ_G0034498.1 mouse_genomes_project 9 22906834 23033152 + MGP_129S1SvImJ_P0091540 Eepd1 protein_coding protein_coding MGP_129S1SvImJ_T0091541.1 MGP_129S1SvImJ_G0034498.1 mouse_genomes_project 9 22908150 22912597 + Eepd1 protein_coding processed_transcript MGP_129S1SvImJ_T0094704.1 MGP_129S1SvImJ_G0035318.1 mouse_genomes_project 9 110899023 110930326 + MGP_129S1SvImJ_P0094704 Col7a1 protein_coding protein_coding MGP_129S1SvImJ_T0094705.1 MGP_129S1SvImJ_G0035318.1 mouse_genomes_project 9 110899182 110930326 + MGP_129S1SvImJ_P0094705 Col7a1 protein_coding protein_coding MGP_129S1SvImJ_T0094706.1 MGP_129S1SvImJ_G0035318.1 mouse_genomes_project 9 110899182 110929963 + MGP_129S1SvImJ_P0094706 Col7a1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0094707.1 MGP_129S1SvImJ_G0035318.1 mouse_genomes_project 9 110899924 110900854 + Col7a1 protein_coding retained_intron MGP_129S1SvImJ_T0094708.1 MGP_129S1SvImJ_G0035318.1 mouse_genomes_project 9 110913079 110913758 + Col7a1 protein_coding retained_intron MGP_129S1SvImJ_T0094709.1 MGP_129S1SvImJ_G0035318.1 mouse_genomes_project 9 110915108 110925666 + Col7a1 protein_coding retained_intron MGP_129S1SvImJ_T0094710.1 MGP_129S1SvImJ_G0035318.1 mouse_genomes_project 9 110920778 110922632 + Col7a1 protein_coding retained_intron MGP_129S1SvImJ_T0094711.1 MGP_129S1SvImJ_G0035318.1 mouse_genomes_project 9 110928104 110929954 + Col7a1 protein_coding retained_intron MGP_129S1SvImJ_T0094712.1 MGP_129S1SvImJ_G0035318.1 mouse_genomes_project 9 110928337 110929367 + Col7a1 protein_coding retained_intron MGP_129S1SvImJ_T0002453.1 MGP_129S1SvImJ_G0002362.1 mouse_genomes_project 9 102597395 102599435 + TEC TEC MGP_129S1SvImJ_T0091967.1 MGP_129S1SvImJ_G0034684.1 mouse_genomes_project 9 41649343 41673556 + MGP_129S1SvImJ_P0091967 protein_coding protein_coding MGP_129S1SvImJ_T0009233.1 MGP_129S1SvImJ_G0007422.1 mouse_genomes_project 9 33805279 33814071 - Gm27187 lincRNA lincRNA MGP_129S1SvImJ_T0009234.1 MGP_129S1SvImJ_G0007422.1 mouse_genomes_project 9 33805326 33814185 - Gm27187 lincRNA lincRNA MGP_129S1SvImJ_T0016036.1 MGP_129S1SvImJ_G0014125.1 mouse_genomes_project 9 28748939 28749732 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0092390.1 MGP_129S1SvImJ_G0034819.1 mouse_genomes_project 9 52954020 53014509 - MGP_129S1SvImJ_P0092390 Elmod1 protein_coding protein_coding MGP_129S1SvImJ_T0092391.1 MGP_129S1SvImJ_G0034819.1 mouse_genomes_project 9 52954020 52981852 - MGP_129S1SvImJ_P0092391 Elmod1 protein_coding protein_coding MGP_129S1SvImJ_T0092108.1 MGP_129S1SvImJ_G0034725.1 mouse_genomes_project 9 43516691 43521952 + MGP_129S1SvImJ_P0092108 Cd3d protein_coding protein_coding MGP_129S1SvImJ_T0091793.1 MGP_129S1SvImJ_G0034571.1 mouse_genomes_project 9 35652779 35663506 - Tbrg1 protein_coding retained_intron MGP_129S1SvImJ_T0091794.1 MGP_129S1SvImJ_G0034571.1 mouse_genomes_project 9 35652779 35663605 - MGP_129S1SvImJ_P0091794 Tbrg1 protein_coding protein_coding MGP_129S1SvImJ_T0091795.1 MGP_129S1SvImJ_G0034571.1 mouse_genomes_project 9 35655506 35663451 - Tbrg1 protein_coding retained_intron MGP_129S1SvImJ_T0091796.1 MGP_129S1SvImJ_G0034571.1 mouse_genomes_project 9 35658894 35663461 - Tbrg1 protein_coding retained_intron MGP_129S1SvImJ_T0093638.1 MGP_129S1SvImJ_G0035131.1 mouse_genomes_project 9 95639950 95661627 - MGP_129S1SvImJ_P0093638 1190002N15Rik protein_coding protein_coding MGP_129S1SvImJ_T0091710.1 MGP_129S1SvImJ_G0034548.1 mouse_genomes_project 9 34347773 34350824 + MGP_129S1SvImJ_P0091710 Gm7257 protein_coding protein_coding MGP_129S1SvImJ_T0091694.1 MGP_129S1SvImJ_G0034538.1 mouse_genomes_project 9 33376229 33385807 - MGP_129S1SvImJ_P0091694 Hyls1 protein_coding protein_coding MGP_129S1SvImJ_T0091695.1 MGP_129S1SvImJ_G0034538.1 mouse_genomes_project 9 33379866 33385506 - Hyls1 protein_coding retained_intron MGP_129S1SvImJ_T0092230.1 MGP_129S1SvImJ_G0034765.1 mouse_genomes_project 9 47691580 47703313 - MGP_129S1SvImJ_P0092230 Htr3a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0092231.1 MGP_129S1SvImJ_G0034765.1 mouse_genomes_project 9 47691587 47703447 - MGP_129S1SvImJ_P0092231 Htr3a protein_coding protein_coding MGP_129S1SvImJ_T0095185.1 MGP_129S1SvImJ_G0035418.1 mouse_genomes_project 9 122123889 122167119 + MGP_129S1SvImJ_P0095185 Xylb protein_coding protein_coding MGP_129S1SvImJ_T0016087.1 MGP_129S1SvImJ_G0014176.1 mouse_genomes_project 9 77277157 77277455 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091151.1 MGP_129S1SvImJ_G0034338.1 mouse_genomes_project 9 5868120 6123271 - MGP_129S1SvImJ_P0091151 Arhgap42 protein_coding protein_coding MGP_129S1SvImJ_T0091152.1 MGP_129S1SvImJ_G0034338.1 mouse_genomes_project 9 5868176 6122949 - MGP_129S1SvImJ_P0091152 Arhgap42 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091153.1 MGP_129S1SvImJ_G0034338.1 mouse_genomes_project 9 5884947 6123271 - Arhgap42 protein_coding retained_intron MGP_129S1SvImJ_T0091154.1 MGP_129S1SvImJ_G0034338.1 mouse_genomes_project 9 6026629 6123196 - MGP_129S1SvImJ_P0091154 Arhgap42 protein_coding protein_coding MGP_129S1SvImJ_T0093236.1 MGP_129S1SvImJ_G0035037.1 mouse_genomes_project 9 75645369 75649252 + MGP_129S1SvImJ_P0093236 Bcl2l10 protein_coding protein_coding MGP_129S1SvImJ_T0092490.1 MGP_129S1SvImJ_G0034851.1 mouse_genomes_project 9 55768416 55840804 - MGP_129S1SvImJ_P0092490 Lingo1 protein_coding protein_coding MGP_129S1SvImJ_T0092491.1 MGP_129S1SvImJ_G0034851.1 mouse_genomes_project 9 55769029 55785572 - MGP_129S1SvImJ_P0092491 Lingo1 protein_coding protein_coding MGP_129S1SvImJ_T0092492.1 MGP_129S1SvImJ_G0034851.1 mouse_genomes_project 9 55769046 55797608 - MGP_129S1SvImJ_P0092492 Lingo1 protein_coding protein_coding MGP_129S1SvImJ_T0091789.1 MGP_129S1SvImJ_G0034568.1 mouse_genomes_project 9 35543309 35551680 - MGP_129S1SvImJ_P0091789 Nrgn protein_coding protein_coding MGP_129S1SvImJ_T0091790.1 MGP_129S1SvImJ_G0034568.1 mouse_genomes_project 9 35543771 35544956 - Nrgn protein_coding processed_transcript MGP_129S1SvImJ_T0009336.1 MGP_129S1SvImJ_G0007503.1 mouse_genomes_project 9 109097080 109099867 + 1700039M15Rik lincRNA lincRNA MGP_129S1SvImJ_T0095079.1 MGP_129S1SvImJ_G0035388.1 mouse_genomes_project 9 116919936 116927987 - MGP_129S1SvImJ_P0095079 Ccr4 protein_coding protein_coding MGP_129S1SvImJ_T0094948.1 MGP_129S1SvImJ_G0035362.1 mouse_genomes_project 9 113054782 113071600 - MGP_129S1SvImJ_P0094948 Tmie protein_coding unknown_likely_coding MGP_129S1SvImJ_T0094949.1 MGP_129S1SvImJ_G0035362.1 mouse_genomes_project 9 113067012 113070883 - Tmie protein_coding processed_transcript MGP_129S1SvImJ_T0094950.1 MGP_129S1SvImJ_G0035362.1 mouse_genomes_project 9 113067060 113067606 - Tmie protein_coding retained_intron MGP_129S1SvImJ_T0091286.1 MGP_129S1SvImJ_G0034385.1 mouse_genomes_project 9 16052451 16053390 + MGP_129S1SvImJ_P0091286 Olfr834 protein_coding protein_coding MGP_129S1SvImJ_T0092496.1 MGP_129S1SvImJ_G0034855.1 mouse_genomes_project 9 56096144 56097068 + MGP_129S1SvImJ_P0092496 Imp3 protein_coding protein_coding MGP_129S1SvImJ_T0016071.1 MGP_129S1SvImJ_G0014160.1 mouse_genomes_project 9 72319898 72321335 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0092438.1 MGP_129S1SvImJ_G0034838.1 mouse_genomes_project 9 54230508 54290878 + MGP_129S1SvImJ_P0092438 Ube2q2 protein_coding protein_coding MGP_129S1SvImJ_T0092439.1 MGP_129S1SvImJ_G0034838.1 mouse_genomes_project 9 54277695 54289554 + Ube2q2 protein_coding retained_intron MGP_129S1SvImJ_T0093235.1 MGP_129S1SvImJ_G0035036.1 mouse_genomes_project 9 75607964 75642575 + MGP_129S1SvImJ_P0093235 Gnb5 protein_coding protein_coding MGP_129S1SvImJ_T0016158.1 MGP_129S1SvImJ_G0014247.1 mouse_genomes_project 9 106006306 106007021 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095384.1 MGP_129S1SvImJ_G0035484.1 mouse_genomes_project 9 126858285 126863543 + MGP_129S1SvImJ_P0095384 Cxcr6 protein_coding protein_coding MGP_129S1SvImJ_T0011076.1 MGP_129S1SvImJ_G0009192.1 mouse_genomes_project 9 37157926 37158010 + Gm25032 miRNA miRNA MGP_129S1SvImJ_T0011115.1 MGP_129S1SvImJ_G0009231.1 mouse_genomes_project 9 107960875 107960963 + Mirlet7g miRNA miRNA MGP_129S1SvImJ_T0016031.1 MGP_129S1SvImJ_G0014120.1 mouse_genomes_project 9 20002963 20003431 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095382.1 MGP_129S1SvImJ_G0035483.1 mouse_genomes_project 9 126840345 126903814 - MGP_129S1SvImJ_P0095382 Fyco1 protein_coding protein_coding MGP_129S1SvImJ_T0095383.1 MGP_129S1SvImJ_G0035483.1 mouse_genomes_project 9 126840721 126903477 - MGP_129S1SvImJ_P0095383 Fyco1 protein_coding protein_coding MGP_129S1SvImJ_T0095385.1 MGP_129S1SvImJ_G0035483.1 mouse_genomes_project 9 126881945 126903796 - MGP_129S1SvImJ_P0095385 Fyco1 protein_coding protein_coding MGP_129S1SvImJ_T0095386.1 MGP_129S1SvImJ_G0035483.1 mouse_genomes_project 9 126890010 126903801 - Fyco1 protein_coding retained_intron MGP_129S1SvImJ_T0100199.1 MGP_129S1SvImJ_G0038266.1 mouse_genomes_project 9 84894097 84894282 + Gm26146 snRNA snRNA MGP_129S1SvImJ_T0092130.1 MGP_129S1SvImJ_G0034735.1 mouse_genomes_project 9 43802288 43820826 - MGP_129S1SvImJ_P0092130 Il10ra protein_coding protein_coding MGP_129S1SvImJ_T0092131.1 MGP_129S1SvImJ_G0034735.1 mouse_genomes_project 9 43802291 43820826 - MGP_129S1SvImJ_P0092131 Il10ra protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092132.1 MGP_129S1SvImJ_G0034735.1 mouse_genomes_project 9 43802978 43820823 - MGP_129S1SvImJ_P0092132 Il10ra protein_coding protein_coding MGP_129S1SvImJ_T0091596.1 MGP_129S1SvImJ_G0034515.1 mouse_genomes_project 9 28682178 28720879 + MGP_129S1SvImJ_P0091596 Zbtb44 protein_coding protein_coding MGP_129S1SvImJ_T0091597.1 MGP_129S1SvImJ_G0034515.1 mouse_genomes_project 9 28705219 28720607 + MGP_129S1SvImJ_P0091597 Zbtb44 protein_coding protein_coding MGP_129S1SvImJ_T0092184.1 MGP_129S1SvImJ_G0034749.1 mouse_genomes_project 9 44863036 44866630 - MGP_129S1SvImJ_P0092184 Apoc3 protein_coding protein_coding MGP_129S1SvImJ_T0092185.1 MGP_129S1SvImJ_G0034749.1 mouse_genomes_project 9 44863154 44866669 - MGP_129S1SvImJ_P0092185 Apoc3 protein_coding protein_coding MGP_129S1SvImJ_T0092186.1 MGP_129S1SvImJ_G0034749.1 mouse_genomes_project 9 44863301 44867006 - MGP_129S1SvImJ_P0092186 Apoc3 protein_coding protein_coding MGP_129S1SvImJ_T0092187.1 MGP_129S1SvImJ_G0034749.1 mouse_genomes_project 9 44865802 44866839 - MGP_129S1SvImJ_P0092187 Apoc3 protein_coding protein_coding MGP_129S1SvImJ_T0011070.1 MGP_129S1SvImJ_G0009186.1 mouse_genomes_project 9 18848855 18848988 - Mir1946b miRNA miRNA MGP_129S1SvImJ_T0093532.1 MGP_129S1SvImJ_G0035107.1 mouse_genomes_project 9 89250583 89316671 - MGP_129S1SvImJ_P0093532 Snx14 protein_coding protein_coding MGP_129S1SvImJ_T0093533.1 MGP_129S1SvImJ_G0035107.1 mouse_genomes_project 9 89250585 89272776 - Snx14 protein_coding retained_intron MGP_129S1SvImJ_T0093534.1 MGP_129S1SvImJ_G0035107.1 mouse_genomes_project 9 89250585 89316618 - MGP_129S1SvImJ_P0093534 Snx14 protein_coding protein_coding MGP_129S1SvImJ_T0093535.1 MGP_129S1SvImJ_G0035107.1 mouse_genomes_project 9 89250597 89316678 - MGP_129S1SvImJ_P0093535 Snx14 protein_coding protein_coding MGP_129S1SvImJ_T0093536.1 MGP_129S1SvImJ_G0035107.1 mouse_genomes_project 9 89250600 89316634 - MGP_129S1SvImJ_P0093536 Snx14 protein_coding protein_coding MGP_129S1SvImJ_T0093537.1 MGP_129S1SvImJ_G0035107.1 mouse_genomes_project 9 89255396 89316649 - MGP_129S1SvImJ_P0093537 Snx14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093538.1 MGP_129S1SvImJ_G0035107.1 mouse_genomes_project 9 89266339 89268651 - Snx14 protein_coding retained_intron MGP_129S1SvImJ_T0093540.1 MGP_129S1SvImJ_G0035107.1 mouse_genomes_project 9 89297665 89316632 - Snx14 protein_coding retained_intron MGP_129S1SvImJ_T0094503.1 MGP_129S1SvImJ_G0035289.1 mouse_genomes_project 9 110235923 110241841 + MGP_129S1SvImJ_P0094503 Nicn1 protein_coding protein_coding MGP_129S1SvImJ_T0094504.1 MGP_129S1SvImJ_G0035289.1 mouse_genomes_project 9 110235938 110238887 + Nicn1 protein_coding retained_intron MGP_129S1SvImJ_T0094505.1 MGP_129S1SvImJ_G0035289.1 mouse_genomes_project 9 110235949 110238855 + Nicn1 protein_coding processed_transcript MGP_129S1SvImJ_T0094506.1 MGP_129S1SvImJ_G0035289.1 mouse_genomes_project 9 110239197 110240123 + Nicn1 protein_coding retained_intron MGP_129S1SvImJ_T0016097.1 MGP_129S1SvImJ_G0014186.1 mouse_genomes_project 9 81608057 81608929 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0092345.1 MGP_129S1SvImJ_G0034802.1 mouse_genomes_project 9 50712441 50739802 + Arhgap20 protein_coding retained_intron MGP_129S1SvImJ_T0092346.1 MGP_129S1SvImJ_G0034802.1 mouse_genomes_project 9 50712449 50778282 + Arhgap20 protein_coding retained_intron MGP_129S1SvImJ_T0092347.1 MGP_129S1SvImJ_G0034802.1 mouse_genomes_project 9 50712456 50807354 + MGP_129S1SvImJ_P0092347 Arhgap20 protein_coding protein_coding MGP_129S1SvImJ_T0092348.1 MGP_129S1SvImJ_G0034802.1 mouse_genomes_project 9 50712680 50807363 + MGP_129S1SvImJ_P0092348 Arhgap20 protein_coding protein_coding MGP_129S1SvImJ_T0092349.1 MGP_129S1SvImJ_G0034802.1 mouse_genomes_project 9 50766638 50781996 + Arhgap20 protein_coding processed_transcript MGP_129S1SvImJ_T0092350.1 MGP_129S1SvImJ_G0034802.1 mouse_genomes_project 9 50784370 50802147 + Arhgap20 protein_coding processed_transcript MGP_129S1SvImJ_T0002386.1 MGP_129S1SvImJ_G0002296.1 mouse_genomes_project 9 71989818 71993027 - TEC TEC MGP_129S1SvImJ_T0091373.1 MGP_129S1SvImJ_G0034429.1 mouse_genomes_project 9 18042983 18048847 - MGP_129S1SvImJ_P0091373 Angptl6 protein_coding protein_coding MGP_129S1SvImJ_T0005559.1 MGP_129S1SvImJ_G0004690.1 mouse_genomes_project 9 109664385 109665161 + Gm37850 antisense antisense MGP_129S1SvImJ_T0011761.1 MGP_129S1SvImJ_G0009877.1 mouse_genomes_project 9 80591437 80591723 + Gm25433 misc_RNA misc_RNA MGP_129S1SvImJ_T0009358.1 MGP_129S1SvImJ_G0007518.1 mouse_genomes_project 9 121639560 121640459 + Gm16295 lincRNA lincRNA MGP_129S1SvImJ_T0091314.1 MGP_129S1SvImJ_G0034413.1 mouse_genomes_project 9 17279374 17280309 - MGP_129S1SvImJ_P0091314 protein_coding protein_coding MGP_129S1SvImJ_T0016135.1 MGP_129S1SvImJ_G0014224.1 mouse_genomes_project 9 97445113 97445354 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0092421.1 MGP_129S1SvImJ_G0034831.1 mouse_genomes_project 9 53931236 53983332 + MGP_129S1SvImJ_P0092421 Ireb2 protein_coding protein_coding MGP_129S1SvImJ_T0101776.1 MGP_129S1SvImJ_G0039754.1 mouse_genomes_project 9 38702457 38703105 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101777.1 MGP_129S1SvImJ_G0039754.1 mouse_genomes_project 9 38702492 38703075 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0009220.1 MGP_129S1SvImJ_G0007409.1 mouse_genomes_project 9 19357916 19374210 + Gm16845 lincRNA lincRNA MGP_129S1SvImJ_T0016072.1 MGP_129S1SvImJ_G0014161.1 mouse_genomes_project 9 72358123 72358739 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101453.1 MGP_129S1SvImJ_G0039520.1 mouse_genomes_project 9 42881302 42881421 - Gm26306 snoRNA snoRNA MGP_129S1SvImJ_T0005443.1 MGP_129S1SvImJ_G0004611.1 mouse_genomes_project 9 21690085 21774201 + Gm10701 antisense antisense MGP_129S1SvImJ_T0091116.1 MGP_129S1SvImJ_G0034326.1 mouse_genomes_project 9 4487924 4535176 + MGP_129S1SvImJ_P0091116 Mmp20 protein_coding protein_coding MGP_129S1SvImJ_T0094020.1 MGP_129S1SvImJ_G0035213.1 mouse_genomes_project 9 106885203 107127907 - MGP_129S1SvImJ_P0094020 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094021.1 MGP_129S1SvImJ_G0035213.1 mouse_genomes_project 9 106885203 107129965 - MGP_129S1SvImJ_P0094021 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0094022.1 MGP_129S1SvImJ_G0035213.1 mouse_genomes_project 9 106968571 107130171 - MGP_129S1SvImJ_P0094022 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094023.1 MGP_129S1SvImJ_G0035213.1 mouse_genomes_project 9 107020777 107130142 - MGP_129S1SvImJ_P0094023 protein_coding protein_coding MGP_129S1SvImJ_T0100206.1 MGP_129S1SvImJ_G0038273.1 mouse_genomes_project 9 95400868 95401025 + Gm24200 snRNA snRNA MGP_129S1SvImJ_T0091365.1 MGP_129S1SvImJ_G0034426.1 mouse_genomes_project 9 17928228 17976538 - MGP_129S1SvImJ_P0091365 Col5a3 protein_coding protein_coding MGP_129S1SvImJ_T0091366.1 MGP_129S1SvImJ_G0034426.1 mouse_genomes_project 9 17941528 17976538 - Col5a3 protein_coding retained_intron MGP_129S1SvImJ_T0005431.1 MGP_129S1SvImJ_G0004605.1 mouse_genomes_project 9 6120537 6143646 + Gm16833 antisense antisense MGP_129S1SvImJ_T0005432.1 MGP_129S1SvImJ_G0004605.1 mouse_genomes_project 9 6143445 6143646 + Gm16833 antisense antisense MGP_129S1SvImJ_T0092473.1 MGP_129S1SvImJ_G0034846.1 mouse_genomes_project 9 55176728 55198232 + MGP_129S1SvImJ_P0092473 Rcn2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092474.1 MGP_129S1SvImJ_G0034846.1 mouse_genomes_project 9 55176740 55195427 + MGP_129S1SvImJ_P0092474 Rcn2 protein_coding protein_coding MGP_129S1SvImJ_T0092475.1 MGP_129S1SvImJ_G0034846.1 mouse_genomes_project 9 55176753 55179111 + Rcn2 protein_coding retained_intron MGP_129S1SvImJ_T0092476.1 MGP_129S1SvImJ_G0034846.1 mouse_genomes_project 9 55176768 55189473 + Rcn2 protein_coding retained_intron MGP_129S1SvImJ_T0092388.1 MGP_129S1SvImJ_G0034817.1 mouse_genomes_project 9 52900855 52904449 + MGP_129S1SvImJ_P0092388 Sln protein_coding protein_coding MGP_129S1SvImJ_T0002374.1 MGP_129S1SvImJ_G0002284.1 mouse_genomes_project 9 30281240 30283039 - TEC TEC MGP_129S1SvImJ_T0093957.1 MGP_129S1SvImJ_G0035201.1 mouse_genomes_project 9 105108769 105322482 - MGP_129S1SvImJ_P0093957 Tmem108 protein_coding protein_coding MGP_129S1SvImJ_T0093958.1 MGP_129S1SvImJ_G0035201.1 mouse_genomes_project 9 105109600 105392215 - MGP_129S1SvImJ_P0093958 Tmem108 protein_coding protein_coding MGP_129S1SvImJ_T0093959.1 MGP_129S1SvImJ_G0035201.1 mouse_genomes_project 9 105110258 105392172 - MGP_129S1SvImJ_P0093959 Tmem108 protein_coding protein_coding MGP_129S1SvImJ_T0093960.1 MGP_129S1SvImJ_G0035201.1 mouse_genomes_project 9 105110261 105119428 - Tmem108 protein_coding retained_intron MGP_129S1SvImJ_T0093961.1 MGP_129S1SvImJ_G0035201.1 mouse_genomes_project 9 105382656 105392168 - Tmem108 protein_coding retained_intron MGP_129S1SvImJ_T0092675.1 MGP_129S1SvImJ_G0034908.1 mouse_genomes_project 9 59332806 59350591 - Nr2e3 protein_coding retained_intron MGP_129S1SvImJ_T0092676.1 MGP_129S1SvImJ_G0034908.1 mouse_genomes_project 9 59332806 59340078 - Nr2e3 protein_coding retained_intron MGP_129S1SvImJ_T0092677.1 MGP_129S1SvImJ_G0034908.1 mouse_genomes_project 9 59332806 59340161 - MGP_129S1SvImJ_P0092677 Nr2e3 protein_coding protein_coding MGP_129S1SvImJ_T0092678.1 MGP_129S1SvImJ_G0034908.1 mouse_genomes_project 9 59333022 59340154 - Nr2e3 protein_coding retained_intron MGP_129S1SvImJ_T0092679.1 MGP_129S1SvImJ_G0034908.1 mouse_genomes_project 9 59333163 59340118 - Nr2e3 protein_coding retained_intron MGP_129S1SvImJ_T0092680.1 MGP_129S1SvImJ_G0034908.1 mouse_genomes_project 9 59336793 59338835 - Nr2e3 protein_coding retained_intron MGP_129S1SvImJ_T0092681.1 MGP_129S1SvImJ_G0034908.1 mouse_genomes_project 9 59337414 59339438 - Nr2e3 protein_coding processed_transcript MGP_129S1SvImJ_T0092682.1 MGP_129S1SvImJ_G0034908.1 mouse_genomes_project 9 59338641 59350587 - Nr2e3 protein_coding processed_transcript MGP_129S1SvImJ_T0092683.1 MGP_129S1SvImJ_G0034908.1 mouse_genomes_project 9 59338761 59340118 - Nr2e3 protein_coding retained_intron MGP_129S1SvImJ_T0005583.1 MGP_129S1SvImJ_G0004710.1 mouse_genomes_project 9 124785103 124796078 + Gm17163 antisense antisense MGP_129S1SvImJ_T0091384.1 MGP_129S1SvImJ_G0034435.1 mouse_genomes_project 9 18192792 18209953 + MGP_129S1SvImJ_P0091384 Icam1 protein_coding protein_coding MGP_129S1SvImJ_T0092988.1 MGP_129S1SvImJ_G0034990.1 mouse_genomes_project 9 68595200 68606344 + Rora protein_coding processed_transcript MGP_129S1SvImJ_T0092989.1 MGP_129S1SvImJ_G0034990.1 mouse_genomes_project 9 68595200 69379315 + MGP_129S1SvImJ_P0092989 Rora protein_coding protein_coding MGP_129S1SvImJ_T0092990.1 MGP_129S1SvImJ_G0034990.1 mouse_genomes_project 9 68595305 69355592 + MGP_129S1SvImJ_P0092990 Rora protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092991.1 MGP_129S1SvImJ_G0034990.1 mouse_genomes_project 9 68596717 68605558 + Rora protein_coding processed_transcript MGP_129S1SvImJ_T0092992.1 MGP_129S1SvImJ_G0034990.1 mouse_genomes_project 9 69177328 69234276 + Rora protein_coding processed_transcript MGP_129S1SvImJ_T0092993.1 MGP_129S1SvImJ_G0034990.1 mouse_genomes_project 9 69275888 69370883 + MGP_129S1SvImJ_P0092993 Rora protein_coding protein_coding MGP_129S1SvImJ_T0002415.1 MGP_129S1SvImJ_G0002325.1 mouse_genomes_project 9 82670209 82670813 + TEC TEC MGP_129S1SvImJ_T0094628.1 MGP_129S1SvImJ_G0035307.1 mouse_genomes_project 9 110539676 110546101 - MGP_129S1SvImJ_P0094628 Wdr6 protein_coding protein_coding MGP_129S1SvImJ_T0092499.1 MGP_129S1SvImJ_G0034858.1 mouse_genomes_project 9 56241513 56258933 + MGP_129S1SvImJ_P0092499 Sin3a protein_coding protein_coding MGP_129S1SvImJ_T0092500.1 MGP_129S1SvImJ_G0034858.1 mouse_genomes_project 9 56244811 56297422 + MGP_129S1SvImJ_P0092500 Sin3a protein_coding protein_coding MGP_129S1SvImJ_T0092501.1 MGP_129S1SvImJ_G0034858.1 mouse_genomes_project 9 56245849 56297420 + MGP_129S1SvImJ_P0092501 Sin3a protein_coding protein_coding MGP_129S1SvImJ_T0092502.1 MGP_129S1SvImJ_G0034858.1 mouse_genomes_project 9 56245872 56297422 + MGP_129S1SvImJ_P0092502 Sin3a protein_coding protein_coding MGP_129S1SvImJ_T0092503.1 MGP_129S1SvImJ_G0034858.1 mouse_genomes_project 9 56246101 56264837 + MGP_129S1SvImJ_P0092503 Sin3a protein_coding protein_coding MGP_129S1SvImJ_T0092504.1 MGP_129S1SvImJ_G0034858.1 mouse_genomes_project 9 56250631 56297422 + MGP_129S1SvImJ_P0092504 Sin3a protein_coding protein_coding MGP_129S1SvImJ_T0092505.1 MGP_129S1SvImJ_G0034858.1 mouse_genomes_project 9 56256018 56297422 + MGP_129S1SvImJ_P0092505 Sin3a protein_coding protein_coding MGP_129S1SvImJ_T0092506.1 MGP_129S1SvImJ_G0034858.1 mouse_genomes_project 9 56264681 56267314 + Sin3a protein_coding retained_intron MGP_129S1SvImJ_T0092507.1 MGP_129S1SvImJ_G0034858.1 mouse_genomes_project 9 56282595 56294244 + Sin3a protein_coding retained_intron MGP_129S1SvImJ_T0101446.1 MGP_129S1SvImJ_G0039513.1 mouse_genomes_project 9 35128946 35129061 - Gm25273 snoRNA snoRNA MGP_129S1SvImJ_T0002460.1 MGP_129S1SvImJ_G0002369.1 mouse_genomes_project 9 103591976 103597534 - TEC TEC MGP_129S1SvImJ_T0016106.1 MGP_129S1SvImJ_G0014195.1 mouse_genomes_project 9 86586756 86587564 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100203.1 MGP_129S1SvImJ_G0038270.1 mouse_genomes_project 9 91268928 91269099 + Gm22717 snRNA snRNA MGP_129S1SvImJ_T0092188.1 MGP_129S1SvImJ_G0034750.1 mouse_genomes_project 9 44872077 44874829 + MGP_129S1SvImJ_P0092188 Apoa4 protein_coding protein_coding MGP_129S1SvImJ_T0091092.1 MGP_129S1SvImJ_G0034317.1 mouse_genomes_project 9 3775521 4040005 - MGP_129S1SvImJ_P0091092 Dync2h1 protein_coding protein_coding MGP_129S1SvImJ_T0091093.1 MGP_129S1SvImJ_G0034317.1 mouse_genomes_project 9 3775521 4031419 - MGP_129S1SvImJ_P0091093 Dync2h1 protein_coding protein_coding MGP_129S1SvImJ_T0091094.1 MGP_129S1SvImJ_G0034317.1 mouse_genomes_project 9 3776322 4031330 - MGP_129S1SvImJ_P0091094 Dync2h1 protein_coding protein_coding MGP_129S1SvImJ_T0091095.1 MGP_129S1SvImJ_G0034317.1 mouse_genomes_project 9 3776483 4031330 - MGP_129S1SvImJ_P0091095 Dync2h1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091096.1 MGP_129S1SvImJ_G0034317.1 mouse_genomes_project 9 3792927 3802310 - Dync2h1 protein_coding retained_intron MGP_129S1SvImJ_T0091097.1 MGP_129S1SvImJ_G0034317.1 mouse_genomes_project 9 3874649 3963770 - MGP_129S1SvImJ_P0091097 Dync2h1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091098.1 MGP_129S1SvImJ_G0034317.1 mouse_genomes_project 9 3995951 4031417 - Dync2h1 protein_coding retained_intron MGP_129S1SvImJ_T0091099.1 MGP_129S1SvImJ_G0034317.1 mouse_genomes_project 9 4003437 4031338 - MGP_129S1SvImJ_P0091099 Dync2h1 protein_coding protein_coding MGP_129S1SvImJ_T0091281.1 MGP_129S1SvImJ_G0034380.1 mouse_genomes_project 9 15880804 15881743 - MGP_129S1SvImJ_P0091281 Olfr828 protein_coding protein_coding MGP_129S1SvImJ_T0009340.1 MGP_129S1SvImJ_G0007506.1 mouse_genomes_project 9 109479285 109479752 + Gm38150 lincRNA lincRNA MGP_129S1SvImJ_T0093320.1 MGP_129S1SvImJ_G0035062.1 mouse_genomes_project 9 78737323 78738281 + MGP_129S1SvImJ_P0093320 Dppa5a protein_coding protein_coding MGP_129S1SvImJ_T0093763.1 MGP_129S1SvImJ_G0035155.1 mouse_genomes_project 9 99786530 99812030 + MGP_129S1SvImJ_P0093763 Rbp2 protein_coding protein_coding MGP_129S1SvImJ_T0093764.1 MGP_129S1SvImJ_G0035155.1 mouse_genomes_project 9 99786581 99811898 + MGP_129S1SvImJ_P0093764 Rbp2 protein_coding protein_coding MGP_129S1SvImJ_T0093765.1 MGP_129S1SvImJ_G0035155.1 mouse_genomes_project 9 99790986 99812020 + MGP_129S1SvImJ_P0093765 Rbp2 protein_coding protein_coding MGP_129S1SvImJ_T0093766.1 MGP_129S1SvImJ_G0035155.1 mouse_genomes_project 9 99792146 99799335 + Rbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0094252.1 MGP_129S1SvImJ_G0035256.1 mouse_genomes_project 9 109422790 109426791 + MGP_129S1SvImJ_P0094252 Zmynd10 protein_coding protein_coding MGP_129S1SvImJ_T0094253.1 MGP_129S1SvImJ_G0035256.1 mouse_genomes_project 9 109422796 109423362 + Zmynd10 protein_coding processed_transcript MGP_129S1SvImJ_T0094254.1 MGP_129S1SvImJ_G0035256.1 mouse_genomes_project 9 109422946 109426791 + MGP_129S1SvImJ_P0094254 Zmynd10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094255.1 MGP_129S1SvImJ_G0035256.1 mouse_genomes_project 9 109424639 109425687 + Zmynd10 protein_coding retained_intron MGP_129S1SvImJ_T0094256.1 MGP_129S1SvImJ_G0035256.1 mouse_genomes_project 9 109425960 109426691 + Zmynd10 protein_coding retained_intron MGP_129S1SvImJ_T0091706.1 MGP_129S1SvImJ_G0034545.1 mouse_genomes_project 9 33583022 33584608 - MGP_129S1SvImJ_P0091706 Gm17727 protein_coding protein_coding MGP_129S1SvImJ_T0095116.1 MGP_129S1SvImJ_G0035403.1 mouse_genomes_project 9 120696039 120722142 + MGP_129S1SvImJ_P0095116 Azi2 protein_coding protein_coding MGP_129S1SvImJ_T0095117.1 MGP_129S1SvImJ_G0035403.1 mouse_genomes_project 9 120696097 120719470 + MGP_129S1SvImJ_P0095117 Azi2 protein_coding protein_coding MGP_129S1SvImJ_T0095118.1 MGP_129S1SvImJ_G0035403.1 mouse_genomes_project 9 120696119 120717225 + MGP_129S1SvImJ_P0095118 Azi2 protein_coding protein_coding MGP_129S1SvImJ_T0095119.1 MGP_129S1SvImJ_G0035403.1 mouse_genomes_project 9 120696156 120728082 + MGP_129S1SvImJ_P0095119 Azi2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095120.1 MGP_129S1SvImJ_G0035403.1 mouse_genomes_project 9 120696227 120705748 + Azi2 protein_coding retained_intron MGP_129S1SvImJ_T0095121.1 MGP_129S1SvImJ_G0035403.1 mouse_genomes_project 9 120704842 120719220 + MGP_129S1SvImJ_P0095121 Azi2 protein_coding protein_coding MGP_129S1SvImJ_T0095122.1 MGP_129S1SvImJ_G0035403.1 mouse_genomes_project 9 120704903 120707112 + Azi2 protein_coding retained_intron MGP_129S1SvImJ_T0095123.1 MGP_129S1SvImJ_G0035403.1 mouse_genomes_project 9 120706339 120718615 + MGP_129S1SvImJ_P0095123 Azi2 protein_coding protein_coding MGP_129S1SvImJ_T0095124.1 MGP_129S1SvImJ_G0035403.1 mouse_genomes_project 9 120710941 120718517 + Azi2 protein_coding retained_intron MGP_129S1SvImJ_T0095125.1 MGP_129S1SvImJ_G0035403.1 mouse_genomes_project 9 120715810 120718991 + MGP_129S1SvImJ_P0095125 Azi2 protein_coding protein_coding MGP_129S1SvImJ_T0091312.1 MGP_129S1SvImJ_G0034411.1 mouse_genomes_project 9 17234432 17246702 + MGP_129S1SvImJ_P0091312 Olfr869 protein_coding protein_coding MGP_129S1SvImJ_T0091557.1 MGP_129S1SvImJ_G0034503.1 mouse_genomes_project 9 24421343 24436455 - Acad8 protein_coding retained_intron MGP_129S1SvImJ_T0091558.1 MGP_129S1SvImJ_G0034503.1 mouse_genomes_project 9 24421343 24456009 - MGP_129S1SvImJ_P0091558 Acad8 protein_coding protein_coding MGP_129S1SvImJ_T0091559.1 MGP_129S1SvImJ_G0034503.1 mouse_genomes_project 9 24421352 24455993 - MGP_129S1SvImJ_P0091559 Acad8 protein_coding protein_coding MGP_129S1SvImJ_T0091560.1 MGP_129S1SvImJ_G0034503.1 mouse_genomes_project 9 24422583 24425166 - Acad8 protein_coding retained_intron MGP_129S1SvImJ_T0091561.1 MGP_129S1SvImJ_G0034503.1 mouse_genomes_project 9 24426409 24455952 - MGP_129S1SvImJ_P0091561 Acad8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091562.1 MGP_129S1SvImJ_G0034503.1 mouse_genomes_project 9 24426470 24455950 - MGP_129S1SvImJ_P0091562 Acad8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091563.1 MGP_129S1SvImJ_G0034503.1 mouse_genomes_project 9 24436424 24455949 - Acad8 protein_coding retained_intron MGP_129S1SvImJ_T0092437.1 MGP_129S1SvImJ_G0034837.1 mouse_genomes_project 9 54107624 54128778 - MGP_129S1SvImJ_P0092437 Chrnb4 protein_coding protein_coding MGP_129S1SvImJ_T0094222.1 MGP_129S1SvImJ_G0035250.1 mouse_genomes_project 9 109183642 109194750 - MGP_129S1SvImJ_P0094222 Hemk1 protein_coding protein_coding MGP_129S1SvImJ_T0094223.1 MGP_129S1SvImJ_G0035250.1 mouse_genomes_project 9 109184250 109194718 - Hemk1 protein_coding retained_intron MGP_129S1SvImJ_T0094224.1 MGP_129S1SvImJ_G0035250.1 mouse_genomes_project 9 109184268 109193059 - Hemk1 protein_coding processed_transcript MGP_129S1SvImJ_T0094225.1 MGP_129S1SvImJ_G0035250.1 mouse_genomes_project 9 109184270 109186011 - Hemk1 protein_coding retained_intron MGP_129S1SvImJ_T0094226.1 MGP_129S1SvImJ_G0035250.1 mouse_genomes_project 9 109184549 109194733 - MGP_129S1SvImJ_P0094226 Hemk1 protein_coding protein_coding MGP_129S1SvImJ_T0094227.1 MGP_129S1SvImJ_G0035250.1 mouse_genomes_project 9 109185918 109187228 - Hemk1 protein_coding retained_intron MGP_129S1SvImJ_T0094228.1 MGP_129S1SvImJ_G0035250.1 mouse_genomes_project 9 109191541 109194702 - Hemk1 protein_coding retained_intron MGP_129S1SvImJ_T0101481.1 MGP_129S1SvImJ_G0039548.1 mouse_genomes_project 9 89747303 89747372 - snoRNA snoRNA MGP_129S1SvImJ_T0093327.1 MGP_129S1SvImJ_G0035065.1 mouse_genomes_project 9 78819385 78823626 + MGP_129S1SvImJ_P0093327 protein_coding protein_coding MGP_129S1SvImJ_T0093328.1 MGP_129S1SvImJ_G0035065.1 mouse_genomes_project 9 78821573 78823594 + MGP_129S1SvImJ_P0093328 protein_coding protein_coding MGP_129S1SvImJ_T0093329.1 MGP_129S1SvImJ_G0035065.1 mouse_genomes_project 9 78821588 78823594 + protein_coding processed_transcript MGP_129S1SvImJ_T0093334.1 MGP_129S1SvImJ_G0035065.1 mouse_genomes_project 9 78822150 78823294 + MGP_129S1SvImJ_P0093334 protein_coding protein_coding MGP_129S1SvImJ_T0093336.1 MGP_129S1SvImJ_G0035065.1 mouse_genomes_project 9 78822636 78823626 + MGP_129S1SvImJ_P0093336 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091630.1 MGP_129S1SvImJ_G0034525.1 mouse_genomes_project 9 30172382 30297398 - MGP_129S1SvImJ_P0091630 Fli1 protein_coding protein_coding MGP_129S1SvImJ_T0091631.1 MGP_129S1SvImJ_G0034525.1 mouse_genomes_project 9 30178233 30298664 - MGP_129S1SvImJ_P0091631 Fli1 protein_coding protein_coding MGP_129S1SvImJ_T0094944.1 MGP_129S1SvImJ_G0035360.1 mouse_genomes_project 9 113030795 113044481 + MGP_129S1SvImJ_P0094944 Prss46 protein_coding protein_coding MGP_129S1SvImJ_T0094945.1 MGP_129S1SvImJ_G0035360.1 mouse_genomes_project 9 113036523 113044475 + MGP_129S1SvImJ_P0094945 Prss46 protein_coding protein_coding MGP_129S1SvImJ_T0091133.1 MGP_129S1SvImJ_G0034331.1 mouse_genomes_project 9 4808130 4899201 - MGP_129S1SvImJ_P0091133 Yap1 protein_coding protein_coding MGP_129S1SvImJ_T0091134.1 MGP_129S1SvImJ_G0034331.1 mouse_genomes_project 9 4808130 4899209 - MGP_129S1SvImJ_P0091134 Yap1 protein_coding protein_coding MGP_129S1SvImJ_T0091135.1 MGP_129S1SvImJ_G0034331.1 mouse_genomes_project 9 4811407 4896265 - MGP_129S1SvImJ_P0091135 Yap1 protein_coding protein_coding MGP_129S1SvImJ_T0091136.1 MGP_129S1SvImJ_G0034331.1 mouse_genomes_project 9 4811407 4899003 - MGP_129S1SvImJ_P0091136 Yap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091137.1 MGP_129S1SvImJ_G0034331.1 mouse_genomes_project 9 4811407 4899003 - MGP_129S1SvImJ_P0091137 Yap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091138.1 MGP_129S1SvImJ_G0034331.1 mouse_genomes_project 9 4811407 4899003 - MGP_129S1SvImJ_P0091138 Yap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091139.1 MGP_129S1SvImJ_G0034331.1 mouse_genomes_project 9 4852486 4856002 - Yap1 protein_coding processed_transcript MGP_129S1SvImJ_T0091140.1 MGP_129S1SvImJ_G0034331.1 mouse_genomes_project 9 4864086 4898317 - Yap1 protein_coding processed_transcript MGP_129S1SvImJ_T0091141.1 MGP_129S1SvImJ_G0034331.1 mouse_genomes_project 9 4864128 4898335 - Yap1 protein_coding processed_transcript MGP_129S1SvImJ_T0091142.1 MGP_129S1SvImJ_G0034331.1 mouse_genomes_project 9 4890225 4899209 - Yap1 protein_coding retained_intron MGP_129S1SvImJ_T0094289.1 MGP_129S1SvImJ_G0035262.1 mouse_genomes_project 9 109461392 109468686 + MGP_129S1SvImJ_P0094289 Hyal3 protein_coding protein_coding MGP_129S1SvImJ_T0094290.1 MGP_129S1SvImJ_G0035262.1 mouse_genomes_project 9 109461867 109472162 + MGP_129S1SvImJ_P0094290 Hyal3 protein_coding protein_coding MGP_129S1SvImJ_T0094291.1 MGP_129S1SvImJ_G0035262.1 mouse_genomes_project 9 109465316 109468515 + MGP_129S1SvImJ_P0094291 Hyal3 protein_coding protein_coding MGP_129S1SvImJ_T0101432.1 MGP_129S1SvImJ_G0039499.1 mouse_genomes_project 9 12298817 12298891 + Gm24357 snoRNA snoRNA MGP_129S1SvImJ_T0002408.1 MGP_129S1SvImJ_G0002318.1 mouse_genomes_project 9 73788898 73790926 - TEC TEC MGP_129S1SvImJ_T0095319.1 MGP_129S1SvImJ_G0035462.1 mouse_genomes_project 9 125806298 125837006 + MGP_129S1SvImJ_P0095319 Tcaim protein_coding protein_coding MGP_129S1SvImJ_T0095320.1 MGP_129S1SvImJ_G0035462.1 mouse_genomes_project 9 125806320 125812609 + Tcaim protein_coding processed_transcript MGP_129S1SvImJ_T0095321.1 MGP_129S1SvImJ_G0035462.1 mouse_genomes_project 9 125806355 125836999 + MGP_129S1SvImJ_P0095321 Tcaim protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094676.1 MGP_129S1SvImJ_G0035314.1 mouse_genomes_project 9 110817321 110843943 + MGP_129S1SvImJ_P0094676 Celsr3 protein_coding protein_coding MGP_129S1SvImJ_T0094677.1 MGP_129S1SvImJ_G0035314.1 mouse_genomes_project 9 110818119 110843950 + MGP_129S1SvImJ_P0094677 Celsr3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0094678.1 MGP_129S1SvImJ_G0035314.1 mouse_genomes_project 9 110822741 110823822 + MGP_129S1SvImJ_P0094678 Celsr3 protein_coding protein_coding MGP_129S1SvImJ_T0094679.1 MGP_129S1SvImJ_G0035314.1 mouse_genomes_project 9 110825473 110827575 + Celsr3 protein_coding retained_intron MGP_129S1SvImJ_T0094680.1 MGP_129S1SvImJ_G0035314.1 mouse_genomes_project 9 110833596 110834213 + Celsr3 protein_coding retained_intron MGP_129S1SvImJ_T0094681.1 MGP_129S1SvImJ_G0035314.1 mouse_genomes_project 9 110834222 110834908 + Celsr3 protein_coding retained_intron MGP_129S1SvImJ_T0094682.1 MGP_129S1SvImJ_G0035314.1 mouse_genomes_project 9 110834240 110839722 + MGP_129S1SvImJ_P0094682 Celsr3 protein_coding protein_coding MGP_129S1SvImJ_T0005449.1 MGP_129S1SvImJ_G0004617.1 mouse_genomes_project 9 34959720 34964632 + Gm3896 antisense antisense MGP_129S1SvImJ_T0101479.1 MGP_129S1SvImJ_G0039546.1 mouse_genomes_project 9 88882289 88882419 - Gm23176 snoRNA snoRNA MGP_129S1SvImJ_T0091775.1 MGP_129S1SvImJ_G0034564.1 mouse_genomes_project 9 35391374 35394560 - Robo3 protein_coding retained_intron MGP_129S1SvImJ_T0091776.1 MGP_129S1SvImJ_G0034564.1 mouse_genomes_project 9 35391750 35398297 - Robo3 protein_coding retained_intron MGP_129S1SvImJ_T0091777.1 MGP_129S1SvImJ_G0034564.1 mouse_genomes_project 9 35391750 35419625 - MGP_129S1SvImJ_P0091777 Robo3 protein_coding protein_coding MGP_129S1SvImJ_T0091778.1 MGP_129S1SvImJ_G0034564.1 mouse_genomes_project 9 35391750 35407659 - MGP_129S1SvImJ_P0091778 Robo3 protein_coding protein_coding MGP_129S1SvImJ_T0091779.1 MGP_129S1SvImJ_G0034564.1 mouse_genomes_project 9 35391867 35407659 - Robo3 protein_coding retained_intron MGP_129S1SvImJ_T0091780.1 MGP_129S1SvImJ_G0034564.1 mouse_genomes_project 9 35392093 35419463 - MGP_129S1SvImJ_P0091780 Robo3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091781.1 MGP_129S1SvImJ_G0034564.1 mouse_genomes_project 9 35393107 35394487 - Robo3 protein_coding retained_intron MGP_129S1SvImJ_T0011757.1 MGP_129S1SvImJ_G0009873.1 mouse_genomes_project 9 53578510 53578728 + Gm25980 misc_RNA misc_RNA MGP_129S1SvImJ_T0016030.1 MGP_129S1SvImJ_G0014119.1 mouse_genomes_project 9 19994095 19994890 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100172.1 MGP_129S1SvImJ_G0038239.1 mouse_genomes_project 9 45300109 45300216 - Gm22805 snRNA snRNA MGP_129S1SvImJ_T0100195.1 MGP_129S1SvImJ_G0038262.1 mouse_genomes_project 9 74617904 74618019 + Gm24141 snRNA snRNA MGP_129S1SvImJ_T0093811.1 MGP_129S1SvImJ_G0035170.1 mouse_genomes_project 9 100852107 100944599 - MGP_129S1SvImJ_P0093811 Armc8 protein_coding protein_coding MGP_129S1SvImJ_T0093812.1 MGP_129S1SvImJ_G0035170.1 mouse_genomes_project 9 100895462 100944346 - MGP_129S1SvImJ_P0093812 Armc8 protein_coding protein_coding MGP_129S1SvImJ_T0093813.1 MGP_129S1SvImJ_G0035170.1 mouse_genomes_project 9 100927079 100944363 - Armc8 protein_coding retained_intron MGP_129S1SvImJ_T0091828.1 MGP_129S1SvImJ_G0034601.1 mouse_genomes_project 9 36552033 36552969 + MGP_129S1SvImJ_P0091828 Olfr906 protein_coding protein_coding MGP_129S1SvImJ_T0091315.1 MGP_129S1SvImJ_G0034414.1 mouse_genomes_project 9 17405439 17412210 + MGP_129S1SvImJ_P0091315 Olfr39 protein_coding protein_coding MGP_129S1SvImJ_T0093780.1 MGP_129S1SvImJ_G0035163.1 mouse_genomes_project 9 100321755 100339506 + MGP_129S1SvImJ_P0093780 Faim protein_coding protein_coding MGP_129S1SvImJ_T0093781.1 MGP_129S1SvImJ_G0035163.1 mouse_genomes_project 9 100321764 100326026 + Faim protein_coding retained_intron MGP_129S1SvImJ_T0093782.1 MGP_129S1SvImJ_G0035163.1 mouse_genomes_project 9 100321770 100328602 + Faim protein_coding retained_intron MGP_129S1SvImJ_T0093783.1 MGP_129S1SvImJ_G0035163.1 mouse_genomes_project 9 100327194 100339490 + MGP_129S1SvImJ_P0093783 Faim protein_coding protein_coding MGP_129S1SvImJ_T0091146.1 MGP_129S1SvImJ_G0034335.1 mouse_genomes_project 9 5438887 5567266 + MGP_129S1SvImJ_P0091146 Trpc6 protein_coding protein_coding MGP_129S1SvImJ_T0018572.1 MGP_129S1SvImJ_G0015741.1 mouse_genomes_project 9 63665719 63668694 - 1700055C04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0016028.1 MGP_129S1SvImJ_G0014117.1 mouse_genomes_project 9 18759304 18759663 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091217.1 MGP_129S1SvImJ_G0034357.1 mouse_genomes_project 9 11822558 11833138 + MGP_129S1SvImJ_P0091217 Gpr83 protein_coding protein_coding MGP_129S1SvImJ_T0091218.1 MGP_129S1SvImJ_G0034357.1 mouse_genomes_project 9 11822602 11832659 + MGP_129S1SvImJ_P0091218 Gpr83 protein_coding protein_coding MGP_129S1SvImJ_T0091219.1 MGP_129S1SvImJ_G0034357.1 mouse_genomes_project 9 11827688 11833138 + Gpr83 protein_coding retained_intron MGP_129S1SvImJ_T0091502.1 MGP_129S1SvImJ_G0034482.1 mouse_genomes_project 9 19523194 19540720 + MGP_129S1SvImJ_P0091502 Zfp809 protein_coding protein_coding MGP_129S1SvImJ_T0094652.1 MGP_129S1SvImJ_G0035311.1 mouse_genomes_project 9 110668679 110712988 + MGP_129S1SvImJ_P0094652 Prkar2a protein_coding protein_coding MGP_129S1SvImJ_T0094653.1 MGP_129S1SvImJ_G0035311.1 mouse_genomes_project 9 110671507 110738445 + MGP_129S1SvImJ_P0094653 Prkar2a protein_coding protein_coding MGP_129S1SvImJ_T0094654.1 MGP_129S1SvImJ_G0035311.1 mouse_genomes_project 9 110671821 110735003 + MGP_129S1SvImJ_P0094654 Prkar2a protein_coding protein_coding MGP_129S1SvImJ_T0094655.1 MGP_129S1SvImJ_G0035311.1 mouse_genomes_project 9 110699820 110732272 + MGP_129S1SvImJ_P0094655 Prkar2a protein_coding protein_coding MGP_129S1SvImJ_T0094656.1 MGP_129S1SvImJ_G0035311.1 mouse_genomes_project 9 110725542 110726853 + Prkar2a protein_coding retained_intron MGP_129S1SvImJ_T0094657.1 MGP_129S1SvImJ_G0035311.1 mouse_genomes_project 9 110736253 110737512 + Prkar2a protein_coding processed_transcript MGP_129S1SvImJ_T0018531.1 MGP_129S1SvImJ_G0015730.1 mouse_genomes_project 9 12313679 12318452 + Gm16568 processed_transcript processed_transcript MGP_129S1SvImJ_T0009274.1 MGP_129S1SvImJ_G0007452.1 mouse_genomes_project 9 72355320 72378832 - Gm27188 lincRNA lincRNA MGP_129S1SvImJ_T0093199.1 MGP_129S1SvImJ_G0035030.1 mouse_genomes_project 9 74360089 74392798 + Wdr72 protein_coding processed_transcript MGP_129S1SvImJ_T0093200.1 MGP_129S1SvImJ_G0035030.1 mouse_genomes_project 9 74360089 74533934 + MGP_129S1SvImJ_P0093200 Wdr72 protein_coding protein_coding MGP_129S1SvImJ_T0093201.1 MGP_129S1SvImJ_G0035030.1 mouse_genomes_project 9 74360137 74363241 + Wdr72 protein_coding processed_transcript MGP_129S1SvImJ_T0093202.1 MGP_129S1SvImJ_G0035030.1 mouse_genomes_project 9 74382050 74532454 + MGP_129S1SvImJ_P0093202 Wdr72 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0093203.1 MGP_129S1SvImJ_G0035030.1 mouse_genomes_project 9 74524022 74534039 + Wdr72 protein_coding processed_transcript MGP_129S1SvImJ_T0005444.1 MGP_129S1SvImJ_G0004612.1 mouse_genomes_project 9 26613623 26624024 + Gm15520 antisense antisense MGP_129S1SvImJ_T0092205.1 MGP_129S1SvImJ_G0034756.1 mouse_genomes_project 9 46267323 46593570 + MGP_129S1SvImJ_P0092205 Cadm1 protein_coding protein_coding MGP_129S1SvImJ_T0092206.1 MGP_129S1SvImJ_G0034756.1 mouse_genomes_project 9 46267361 46590773 + MGP_129S1SvImJ_P0092206 Cadm1 protein_coding protein_coding MGP_129S1SvImJ_T0092207.1 MGP_129S1SvImJ_G0034756.1 mouse_genomes_project 9 46267394 46597828 + MGP_129S1SvImJ_P0092207 Cadm1 protein_coding protein_coding MGP_129S1SvImJ_T0092208.1 MGP_129S1SvImJ_G0034756.1 mouse_genomes_project 9 46267407 46593565 + MGP_129S1SvImJ_P0092208 Cadm1 protein_coding protein_coding MGP_129S1SvImJ_T0092209.1 MGP_129S1SvImJ_G0034756.1 mouse_genomes_project 9 46267407 46591215 + MGP_129S1SvImJ_P0092209 Cadm1 protein_coding protein_coding MGP_129S1SvImJ_T0092210.1 MGP_129S1SvImJ_G0034756.1 mouse_genomes_project 9 46267502 46559170 + Cadm1 protein_coding retained_intron MGP_129S1SvImJ_T0092211.1 MGP_129S1SvImJ_G0034756.1 mouse_genomes_project 9 46267502 46531683 + Cadm1 protein_coding retained_intron MGP_129S1SvImJ_T0092212.1 MGP_129S1SvImJ_G0034756.1 mouse_genomes_project 9 46267523 46554123 + Cadm1 protein_coding processed_transcript MGP_129S1SvImJ_T0092213.1 MGP_129S1SvImJ_G0034756.1 mouse_genomes_project 9 46267523 46590576 + MGP_129S1SvImJ_P0092213 Cadm1 protein_coding protein_coding MGP_129S1SvImJ_T0091164.1 MGP_129S1SvImJ_G0034343.1 mouse_genomes_project 9 10541909 10631114 + MGP_129S1SvImJ_P0091164 protein_coding protein_coding MGP_129S1SvImJ_T0091165.1 MGP_129S1SvImJ_G0034343.1 mouse_genomes_project 9 10543742 10629069 + MGP_129S1SvImJ_P0091165 protein_coding protein_coding MGP_129S1SvImJ_T0091166.1 MGP_129S1SvImJ_G0034343.1 mouse_genomes_project 9 10584544 10629071 + protein_coding processed_transcript MGP_129S1SvImJ_T0091167.1 MGP_129S1SvImJ_G0034343.1 mouse_genomes_project 9 10584544 10631259 + MGP_129S1SvImJ_P0091167 protein_coding protein_coding MGP_129S1SvImJ_T0091257.1 MGP_129S1SvImJ_G0034369.1 mouse_genomes_project 9 12825511 12876993 - MGP_129S1SvImJ_P0091257 Mtnr1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091258.1 MGP_129S1SvImJ_G0034369.1 mouse_genomes_project 9 12865197 12876897 - MGP_129S1SvImJ_P0091258 Mtnr1b protein_coding protein_coding MGP_129S1SvImJ_T0094724.1 MGP_129S1SvImJ_G0035321.1 mouse_genomes_project 9 110992361 111014593 + MGP_129S1SvImJ_P0094724 Shisa5 protein_coding protein_coding MGP_129S1SvImJ_T0094725.1 MGP_129S1SvImJ_G0035321.1 mouse_genomes_project 9 110992381 111014540 + MGP_129S1SvImJ_P0094725 Shisa5 protein_coding protein_coding MGP_129S1SvImJ_T0094726.1 MGP_129S1SvImJ_G0035321.1 mouse_genomes_project 9 110992398 111014540 + Shisa5 protein_coding retained_intron MGP_129S1SvImJ_T0094727.1 MGP_129S1SvImJ_G0035321.1 mouse_genomes_project 9 110994212 111013559 + MGP_129S1SvImJ_P0094727 Shisa5 protein_coding protein_coding MGP_129S1SvImJ_T0094728.1 MGP_129S1SvImJ_G0035321.1 mouse_genomes_project 9 110994402 111008199 + MGP_129S1SvImJ_P0094728 Shisa5 protein_coding protein_coding MGP_129S1SvImJ_T0094729.1 MGP_129S1SvImJ_G0035321.1 mouse_genomes_project 9 111007904 111013771 + MGP_129S1SvImJ_P0094729 Shisa5 protein_coding protein_coding MGP_129S1SvImJ_T0094730.1 MGP_129S1SvImJ_G0035321.1 mouse_genomes_project 9 111007963 111013194 + MGP_129S1SvImJ_P0094730 Shisa5 protein_coding protein_coding MGP_129S1SvImJ_T0094731.1 MGP_129S1SvImJ_G0035321.1 mouse_genomes_project 9 111007967 111013840 + MGP_129S1SvImJ_P0094731 Shisa5 protein_coding protein_coding MGP_129S1SvImJ_T0094732.1 MGP_129S1SvImJ_G0035321.1 mouse_genomes_project 9 111007988 111013168 + MGP_129S1SvImJ_P0094732 Shisa5 protein_coding protein_coding MGP_129S1SvImJ_T0094733.1 MGP_129S1SvImJ_G0035321.1 mouse_genomes_project 9 111008006 111013829 + MGP_129S1SvImJ_P0094733 Shisa5 protein_coding protein_coding MGP_129S1SvImJ_T0094734.1 MGP_129S1SvImJ_G0035321.1 mouse_genomes_project 9 111008008 111013227 + MGP_129S1SvImJ_P0094734 Shisa5 protein_coding protein_coding MGP_129S1SvImJ_T0094735.1 MGP_129S1SvImJ_G0035321.1 mouse_genomes_project 9 111008010 111013547 + MGP_129S1SvImJ_P0094735 Shisa5 protein_coding protein_coding MGP_129S1SvImJ_T0094736.1 MGP_129S1SvImJ_G0035321.1 mouse_genomes_project 9 111008019 111013190 + MGP_129S1SvImJ_P0094736 Shisa5 protein_coding protein_coding MGP_129S1SvImJ_T0094737.1 MGP_129S1SvImJ_G0035321.1 mouse_genomes_project 9 111008243 111013674 + MGP_129S1SvImJ_P0094737 Shisa5 protein_coding protein_coding MGP_129S1SvImJ_T0094738.1 MGP_129S1SvImJ_G0035321.1 mouse_genomes_project 9 111009662 111013518 + Shisa5 protein_coding processed_transcript MGP_129S1SvImJ_T0094739.1 MGP_129S1SvImJ_G0035321.1 mouse_genomes_project 9 111011682 111014023 + MGP_129S1SvImJ_P0094739 Shisa5 protein_coding protein_coding MGP_129S1SvImJ_T0094740.1 MGP_129S1SvImJ_G0035321.1 mouse_genomes_project 9 111011767 111013367 + Shisa5 protein_coding processed_transcript MGP_129S1SvImJ_T0094741.1 MGP_129S1SvImJ_G0035321.1 mouse_genomes_project 9 111011831 111013307 + Shisa5 protein_coding processed_transcript MGP_129S1SvImJ_T0094742.1 MGP_129S1SvImJ_G0035321.1 mouse_genomes_project 9 111012755 111013291 + Shisa5 protein_coding retained_intron MGP_129S1SvImJ_T0095227.1 MGP_129S1SvImJ_G0035436.1 mouse_genomes_project 9 123400006 123431982 + MGP_129S1SvImJ_P0095227 Entpd3 protein_coding protein_coding MGP_129S1SvImJ_T0095228.1 MGP_129S1SvImJ_G0035436.1 mouse_genomes_project 9 123421792 123424699 + Entpd3 protein_coding retained_intron MGP_129S1SvImJ_T0009366.1 MGP_129S1SvImJ_G0007524.1 mouse_genomes_project 9 125893550 125912709 - A530083I20Rik lincRNA lincRNA MGP_129S1SvImJ_T0009367.1 MGP_129S1SvImJ_G0007524.1 mouse_genomes_project 9 125903841 125912695 - A530083I20Rik lincRNA lincRNA MGP_129S1SvImJ_T0091453.1 MGP_129S1SvImJ_G0034458.1 mouse_genomes_project 9 18825041 18828290 + MGP_129S1SvImJ_P0091453 1810026J23Rik protein_coding protein_coding MGP_129S1SvImJ_T0091820.1 MGP_129S1SvImJ_G0034593.1 mouse_genomes_project 9 36391068 36392019 + MGP_129S1SvImJ_P0091820 Olfr898 protein_coding protein_coding MGP_129S1SvImJ_T0002396.1 MGP_129S1SvImJ_G0002306.1 mouse_genomes_project 9 72539631 72542383 + TEC TEC MGP_129S1SvImJ_T0092445.1 MGP_129S1SvImJ_G0034840.1 mouse_genomes_project 9 54304721 54375197 - Nrg4 protein_coding processed_transcript MGP_129S1SvImJ_T0092446.1 MGP_129S1SvImJ_G0034840.1 mouse_genomes_project 9 54304722 54375227 - MGP_129S1SvImJ_P0092446 Nrg4 protein_coding protein_coding MGP_129S1SvImJ_T0092447.1 MGP_129S1SvImJ_G0034840.1 mouse_genomes_project 9 54305721 54331387 - Nrg4 protein_coding processed_transcript MGP_129S1SvImJ_T0092448.1 MGP_129S1SvImJ_G0034840.1 mouse_genomes_project 9 54305797 54375189 - MGP_129S1SvImJ_P0092448 Nrg4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092449.1 MGP_129S1SvImJ_G0034840.1 mouse_genomes_project 9 54305800 54420060 - MGP_129S1SvImJ_P0092449 Nrg4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092450.1 MGP_129S1SvImJ_G0034840.1 mouse_genomes_project 9 54305801 54375174 - MGP_129S1SvImJ_P0092450 Nrg4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092451.1 MGP_129S1SvImJ_G0034840.1 mouse_genomes_project 9 54305865 54375183 - Nrg4 protein_coding processed_transcript MGP_129S1SvImJ_T0092452.1 MGP_129S1SvImJ_G0034840.1 mouse_genomes_project 9 54310872 54375174 - MGP_129S1SvImJ_P0092452 Nrg4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092453.1 MGP_129S1SvImJ_G0034840.1 mouse_genomes_project 9 54329625 54375204 - MGP_129S1SvImJ_P0092453 Nrg4 protein_coding protein_coding MGP_129S1SvImJ_T0092454.1 MGP_129S1SvImJ_G0034840.1 mouse_genomes_project 9 54330989 54420155 - Nrg4 protein_coding processed_transcript MGP_129S1SvImJ_T0092455.1 MGP_129S1SvImJ_G0034840.1 mouse_genomes_project 9 54339621 54375189 - Nrg4 protein_coding processed_transcript MGP_129S1SvImJ_T0092456.1 MGP_129S1SvImJ_G0034840.1 mouse_genomes_project 9 54349824 54375200 - Nrg4 protein_coding processed_transcript MGP_129S1SvImJ_T0092457.1 MGP_129S1SvImJ_G0034840.1 mouse_genomes_project 9 54399482 54418501 - Nrg4 protein_coding processed_transcript MGP_129S1SvImJ_T0091205.1 MGP_129S1SvImJ_G0034353.1 mouse_genomes_project 9 11701608 11705272 - MGP_129S1SvImJ_P0091205 Fut4 protein_coding protein_coding MGP_129S1SvImJ_T0094881.1 MGP_129S1SvImJ_G0035347.1 mouse_genomes_project 9 112566531 112569803 + MGP_129S1SvImJ_P0094881 Ngp protein_coding protein_coding MGP_129S1SvImJ_T0011095.1 MGP_129S1SvImJ_G0009211.1 mouse_genomes_project 9 63880422 63880549 + Gm24106 miRNA miRNA MGP_129S1SvImJ_T0091484.1 MGP_129S1SvImJ_G0034474.1 mouse_genomes_project 9 19292217 19338943 - MGP_129S1SvImJ_P0091484 Elavl3 protein_coding protein_coding MGP_129S1SvImJ_T0091485.1 MGP_129S1SvImJ_G0034474.1 mouse_genomes_project 9 19300944 19313965 - MGP_129S1SvImJ_P0091485 Elavl3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0093820.1 MGP_129S1SvImJ_G0035172.1 mouse_genomes_project 9 100988510 100999549 + MGP_129S1SvImJ_P0093820 A4gnt protein_coding protein_coding MGP_129S1SvImJ_T0092484.1 MGP_129S1SvImJ_G0034848.1 mouse_genomes_project 9 55276728 55302099 - MGP_129S1SvImJ_P0092484 Tspan3 protein_coding protein_coding MGP_129S1SvImJ_T0018573.1 MGP_129S1SvImJ_G0015742.1 mouse_genomes_project 9 63712731 63720152 + Scarletltr processed_transcript processed_transcript MGP_129S1SvImJ_T0002494.1 MGP_129S1SvImJ_G0002403.1 mouse_genomes_project 9 116721322 116722289 - TEC TEC MGP_129S1SvImJ_T0101499.1 MGP_129S1SvImJ_G0039566.1 mouse_genomes_project 9 116147033 116147150 - Gm25059 snoRNA snoRNA MGP_129S1SvImJ_T0005445.1 MGP_129S1SvImJ_G0004613.1 mouse_genomes_project 9 30261835 30272111 + Gm27201 antisense antisense MGP_129S1SvImJ_T0095197.1 MGP_129S1SvImJ_G0035422.1 mouse_genomes_project 9 122399303 122514399 - MGP_129S1SvImJ_P0095197 Scn10a protein_coding protein_coding MGP_129S1SvImJ_T0092407.1 MGP_129S1SvImJ_G0034826.1 mouse_genomes_project 9 53638240 53656385 + MGP_129S1SvImJ_P0092407 Idh3a protein_coding protein_coding MGP_129S1SvImJ_T0102839.1 MGP_129S1SvImJ_G0040671.1 mouse_genomes_project 9 126990641 126997267 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0093975.1 MGP_129S1SvImJ_G0035205.1 mouse_genomes_project 9 105714265 105716213 + Acad11 protein_coding retained_intron MGP_129S1SvImJ_T0093976.1 MGP_129S1SvImJ_G0035205.1 mouse_genomes_project 9 105714304 105781450 + MGP_129S1SvImJ_P0093976 Acad11 protein_coding protein_coding MGP_129S1SvImJ_T0093978.1 MGP_129S1SvImJ_G0035205.1 mouse_genomes_project 9 105742091 105766315 + Acad11 protein_coding processed_transcript MGP_129S1SvImJ_T0093979.1 MGP_129S1SvImJ_G0035205.1 mouse_genomes_project 9 105747878 105760929 + MGP_129S1SvImJ_P0093979 Acad11 protein_coding protein_coding MGP_129S1SvImJ_T0093982.1 MGP_129S1SvImJ_G0035205.1 mouse_genomes_project 9 105763286 105766653 + Acad11 protein_coding retained_intron MGP_129S1SvImJ_T0093983.1 MGP_129S1SvImJ_G0035205.1 mouse_genomes_project 9 105777637 105780815 + Acad11 protein_coding processed_transcript MGP_129S1SvImJ_T0092639.1 MGP_129S1SvImJ_G0034897.1 mouse_genomes_project 9 58608007 58637336 + MGP_129S1SvImJ_P0092639 Adpgk protein_coding protein_coding MGP_129S1SvImJ_T0092640.1 MGP_129S1SvImJ_G0034897.1 mouse_genomes_project 9 58608069 58637307 + MGP_129S1SvImJ_P0092640 Adpgk protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091282.1 MGP_129S1SvImJ_G0034381.1 mouse_genomes_project 9 15925931 15926897 + MGP_129S1SvImJ_P0091282 Olfr829 protein_coding protein_coding MGP_129S1SvImJ_T0095081.1 MGP_129S1SvImJ_G0035390.1 mouse_genomes_project 9 116949637 116950365 + MGP_129S1SvImJ_P0095081 protein_coding protein_coding MGP_129S1SvImJ_T0009324.1 MGP_129S1SvImJ_G0007492.1 mouse_genomes_project 9 101428458 101440810 + 4930519F24Rik lincRNA lincRNA MGP_129S1SvImJ_T0092985.1 MGP_129S1SvImJ_G0034988.1 mouse_genomes_project 9 67749157 67750956 - MGP_129S1SvImJ_P0092985 C2cd4a protein_coding protein_coding MGP_129S1SvImJ_T0092477.1 MGP_129S1SvImJ_G0034847.1 mouse_genomes_project 9 55227351 55269674 + MGP_129S1SvImJ_P0092477 Pstpip1 protein_coding protein_coding MGP_129S1SvImJ_T0092478.1 MGP_129S1SvImJ_G0034847.1 mouse_genomes_project 9 55227365 55269662 + Pstpip1 protein_coding retained_intron MGP_129S1SvImJ_T0092479.1 MGP_129S1SvImJ_G0034847.1 mouse_genomes_project 9 55227365 55269658 + Pstpip1 protein_coding retained_intron MGP_129S1SvImJ_T0092480.1 MGP_129S1SvImJ_G0034847.1 mouse_genomes_project 9 55261216 55266878 + Pstpip1 protein_coding processed_transcript MGP_129S1SvImJ_T0092481.1 MGP_129S1SvImJ_G0034847.1 mouse_genomes_project 9 55263019 55264687 + Pstpip1 protein_coding retained_intron MGP_129S1SvImJ_T0092482.1 MGP_129S1SvImJ_G0034847.1 mouse_genomes_project 9 55263984 55266937 + Pstpip1 protein_coding retained_intron MGP_129S1SvImJ_T0092483.1 MGP_129S1SvImJ_G0034847.1 mouse_genomes_project 9 55263984 55264977 + Pstpip1 protein_coding retained_intron MGP_129S1SvImJ_T0016090.1 MGP_129S1SvImJ_G0014179.1 mouse_genomes_project 9 77512539 77514741 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002394.1 MGP_129S1SvImJ_G0002304.1 mouse_genomes_project 9 72508853 72510412 + TEC TEC MGP_129S1SvImJ_T0093984.1 MGP_129S1SvImJ_G0035207.1 mouse_genomes_project 9 105807243 105918977 - MGP_129S1SvImJ_P0093984 Dnajc13 protein_coding protein_coding MGP_129S1SvImJ_T0093985.1 MGP_129S1SvImJ_G0035207.1 mouse_genomes_project 9 105808013 105809458 - Dnajc13 protein_coding retained_intron MGP_129S1SvImJ_T0093986.1 MGP_129S1SvImJ_G0035207.1 mouse_genomes_project 9 105808134 105812856 - Dnajc13 protein_coding processed_transcript MGP_129S1SvImJ_T0093987.1 MGP_129S1SvImJ_G0035207.1 mouse_genomes_project 9 105808228 105813114 - Dnajc13 protein_coding retained_intron MGP_129S1SvImJ_T0093988.1 MGP_129S1SvImJ_G0035207.1 mouse_genomes_project 9 105808278 105902877 - MGP_129S1SvImJ_P0093988 Dnajc13 protein_coding protein_coding MGP_129S1SvImJ_T0093989.1 MGP_129S1SvImJ_G0035207.1 mouse_genomes_project 9 105812845 105818785 - MGP_129S1SvImJ_P0093989 Dnajc13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093990.1 MGP_129S1SvImJ_G0035207.1 mouse_genomes_project 9 105818097 105821073 - MGP_129S1SvImJ_P0093990 Dnajc13 protein_coding protein_coding MGP_129S1SvImJ_T0093991.1 MGP_129S1SvImJ_G0035207.1 mouse_genomes_project 9 105820782 105824054 - Dnajc13 protein_coding retained_intron MGP_129S1SvImJ_T0093992.1 MGP_129S1SvImJ_G0035207.1 mouse_genomes_project 9 105838059 105842961 - Dnajc13 protein_coding retained_intron MGP_129S1SvImJ_T0093993.1 MGP_129S1SvImJ_G0035207.1 mouse_genomes_project 9 105845095 105857610 - MGP_129S1SvImJ_P0093993 Dnajc13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093994.1 MGP_129S1SvImJ_G0035207.1 mouse_genomes_project 9 105848510 105856510 - Dnajc13 protein_coding retained_intron MGP_129S1SvImJ_T0093995.1 MGP_129S1SvImJ_G0035207.1 mouse_genomes_project 9 105852050 105859006 - Dnajc13 protein_coding retained_intron MGP_129S1SvImJ_T0093996.1 MGP_129S1SvImJ_G0035207.1 mouse_genomes_project 9 105879749 105880389 - Dnajc13 protein_coding retained_intron MGP_129S1SvImJ_T0093997.1 MGP_129S1SvImJ_G0035207.1 mouse_genomes_project 9 105888916 105918950 - Dnajc13 protein_coding retained_intron MGP_129S1SvImJ_T0092472.1 MGP_129S1SvImJ_G0034845.1 mouse_genomes_project 9 55091264 55101521 - MGP_129S1SvImJ_P0092472 4930563M21Rik protein_coding protein_coding MGP_129S1SvImJ_T0093715.1 MGP_129S1SvImJ_G0035146.1 mouse_genomes_project 9 97895680 97969157 - MGP_129S1SvImJ_P0093715 Zbtb38 protein_coding protein_coding MGP_129S1SvImJ_T0093716.1 MGP_129S1SvImJ_G0035146.1 mouse_genomes_project 9 97898311 97948128 - MGP_129S1SvImJ_P0093716 Zbtb38 protein_coding protein_coding MGP_129S1SvImJ_T0093717.1 MGP_129S1SvImJ_G0035146.1 mouse_genomes_project 9 97899146 97933748 - MGP_129S1SvImJ_P0093717 Zbtb38 protein_coding non_stop_decay MGP_129S1SvImJ_T0093718.1 MGP_129S1SvImJ_G0035146.1 mouse_genomes_project 9 97900286 97934198 - MGP_129S1SvImJ_P0093718 Zbtb38 protein_coding protein_coding MGP_129S1SvImJ_T0093719.1 MGP_129S1SvImJ_G0035146.1 mouse_genomes_project 9 97901365 97933463 - MGP_129S1SvImJ_P0093719 Zbtb38 protein_coding protein_coding MGP_129S1SvImJ_T0093720.1 MGP_129S1SvImJ_G0035146.1 mouse_genomes_project 9 97932107 97945491 - Zbtb38 protein_coding processed_transcript MGP_129S1SvImJ_T0093721.1 MGP_129S1SvImJ_G0035146.1 mouse_genomes_project 9 97946305 97969011 - Zbtb38 protein_coding retained_intron MGP_129S1SvImJ_T0093722.1 MGP_129S1SvImJ_G0035146.1 mouse_genomes_project 9 97946305 97947796 - Zbtb38 protein_coding processed_transcript MGP_129S1SvImJ_T0093723.1 MGP_129S1SvImJ_G0035146.1 mouse_genomes_project 9 97947913 97949223 - Zbtb38 protein_coding processed_transcript MGP_129S1SvImJ_T0093724.1 MGP_129S1SvImJ_G0035146.1 mouse_genomes_project 9 97948010 97949122 - Zbtb38 protein_coding retained_intron MGP_129S1SvImJ_T0093725.1 MGP_129S1SvImJ_G0035146.1 mouse_genomes_project 9 97963606 97969053 - Zbtb38 protein_coding retained_intron MGP_129S1SvImJ_T0093726.1 MGP_129S1SvImJ_G0035146.1 mouse_genomes_project 9 97963804 97969019 - Zbtb38 protein_coding processed_transcript MGP_129S1SvImJ_T0002481.1 MGP_129S1SvImJ_G0002390.1 mouse_genomes_project 9 110429203 110430217 + TEC TEC MGP_129S1SvImJ_T0002376.1 MGP_129S1SvImJ_G0002286.1 mouse_genomes_project 9 30725930 30727284 + TEC TEC MGP_129S1SvImJ_T0092723.1 MGP_129S1SvImJ_G0034917.1 mouse_genomes_project 9 61459059 61536630 - Paqr5 protein_coding processed_transcript MGP_129S1SvImJ_T0092724.1 MGP_129S1SvImJ_G0034917.1 mouse_genomes_project 9 61459316 61536685 - MGP_129S1SvImJ_P0092724 Paqr5 protein_coding protein_coding MGP_129S1SvImJ_T0092725.1 MGP_129S1SvImJ_G0034917.1 mouse_genomes_project 9 61461624 61483138 - MGP_129S1SvImJ_P0092725 Paqr5 protein_coding protein_coding MGP_129S1SvImJ_T0092416.1 MGP_129S1SvImJ_G0034829.1 mouse_genomes_project 9 53773772 53795154 - MGP_129S1SvImJ_P0092416 Wdr61 protein_coding protein_coding MGP_129S1SvImJ_T0092417.1 MGP_129S1SvImJ_G0034829.1 mouse_genomes_project 9 53776192 53795175 - MGP_129S1SvImJ_P0092417 Wdr61 protein_coding protein_coding MGP_129S1SvImJ_T0092418.1 MGP_129S1SvImJ_G0034829.1 mouse_genomes_project 9 53778257 53779852 - Wdr61 protein_coding retained_intron MGP_129S1SvImJ_T0092419.1 MGP_129S1SvImJ_G0034829.1 mouse_genomes_project 9 53781562 53783395 - Wdr61 protein_coding retained_intron MGP_129S1SvImJ_T0093422.1 MGP_129S1SvImJ_G0035085.1 mouse_genomes_project 9 83775365 83776243 - Hmgn3 protein_coding processed_transcript MGP_129S1SvImJ_T0093423.1 MGP_129S1SvImJ_G0035085.1 mouse_genomes_project 9 83775365 83812894 - MGP_129S1SvImJ_P0093423 Hmgn3 protein_coding protein_coding MGP_129S1SvImJ_T0093424.1 MGP_129S1SvImJ_G0035085.1 mouse_genomes_project 9 83775365 83812679 - MGP_129S1SvImJ_P0093424 Hmgn3 protein_coding protein_coding MGP_129S1SvImJ_T0093425.1 MGP_129S1SvImJ_G0035085.1 mouse_genomes_project 9 83775365 83812814 - MGP_129S1SvImJ_P0093425 Hmgn3 protein_coding protein_coding MGP_129S1SvImJ_T0093426.1 MGP_129S1SvImJ_G0035085.1 mouse_genomes_project 9 83775365 83812739 - MGP_129S1SvImJ_P0093426 Hmgn3 protein_coding protein_coding MGP_129S1SvImJ_T0093427.1 MGP_129S1SvImJ_G0035085.1 mouse_genomes_project 9 83775385 83776549 - Hmgn3 protein_coding retained_intron MGP_129S1SvImJ_T0093428.1 MGP_129S1SvImJ_G0035085.1 mouse_genomes_project 9 83775598 83777987 - Hmgn3 protein_coding retained_intron MGP_129S1SvImJ_T0093429.1 MGP_129S1SvImJ_G0035085.1 mouse_genomes_project 9 83775795 83812726 - MGP_129S1SvImJ_P0093429 Hmgn3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093430.1 MGP_129S1SvImJ_G0035085.1 mouse_genomes_project 9 83776137 83776511 - Hmgn3 protein_coding retained_intron MGP_129S1SvImJ_T0094430.1 MGP_129S1SvImJ_G0035278.1 mouse_genomes_project 9 109899158 109900814 - MGP_129S1SvImJ_P0094430 Fam212a protein_coding protein_coding MGP_129S1SvImJ_T0094431.1 MGP_129S1SvImJ_G0035278.1 mouse_genomes_project 9 109899568 109900567 - MGP_129S1SvImJ_P0094431 Fam212a protein_coding protein_coding MGP_129S1SvImJ_T0093158.1 MGP_129S1SvImJ_G0035019.1 mouse_genomes_project 9 73126736 73154383 + MGP_129S1SvImJ_P0093158 Pygo1 protein_coding protein_coding MGP_129S1SvImJ_T0005544.1 MGP_129S1SvImJ_G0004680.1 mouse_genomes_project 9 108108689 108134665 - Gm29123 antisense antisense MGP_129S1SvImJ_T0093035.1 MGP_129S1SvImJ_G0034997.1 mouse_genomes_project 9 70129791 70186762 - MGP_129S1SvImJ_P0093035 Fam81a protein_coding protein_coding MGP_129S1SvImJ_T0093036.1 MGP_129S1SvImJ_G0034997.1 mouse_genomes_project 9 70142871 70143398 - Fam81a protein_coding retained_intron MGP_129S1SvImJ_T0093037.1 MGP_129S1SvImJ_G0034997.1 mouse_genomes_project 9 70170131 70186987 - MGP_129S1SvImJ_P0093037 Fam81a protein_coding protein_coding MGP_129S1SvImJ_T0093038.1 MGP_129S1SvImJ_G0034997.1 mouse_genomes_project 9 70170162 70187702 - MGP_129S1SvImJ_P0093038 Fam81a protein_coding protein_coding MGP_129S1SvImJ_T0099022.1 MGP_129S1SvImJ_G0037094.1 mouse_genomes_project 9 101973154 101973605 - Gm28586 sense_intronic sense_intronic MGP_129S1SvImJ_T0091163.1 MGP_129S1SvImJ_G0034342.1 mouse_genomes_project 9 10341327 10342703 + MGP_129S1SvImJ_P0091163 Phxr4 protein_coding protein_coding MGP_129S1SvImJ_T0094969.1 MGP_129S1SvImJ_G0035368.1 mouse_genomes_project 9 113216146 113241030 + MGP_129S1SvImJ_P0094969 Ltf protein_coding protein_coding MGP_129S1SvImJ_T0094970.1 MGP_129S1SvImJ_G0035368.1 mouse_genomes_project 9 113216167 113219979 + MGP_129S1SvImJ_P0094970 Ltf protein_coding protein_coding MGP_129S1SvImJ_T0094971.1 MGP_129S1SvImJ_G0035368.1 mouse_genomes_project 9 113216167 113243304 + MGP_129S1SvImJ_P0094971 Ltf protein_coding protein_coding MGP_129S1SvImJ_T0094972.1 MGP_129S1SvImJ_G0035368.1 mouse_genomes_project 9 113216167 113241030 + MGP_129S1SvImJ_P0094972 Ltf protein_coding protein_coding MGP_129S1SvImJ_T0094973.1 MGP_129S1SvImJ_G0035368.1 mouse_genomes_project 9 113216185 113222524 + MGP_129S1SvImJ_P0094973 Ltf protein_coding protein_coding MGP_129S1SvImJ_T0094974.1 MGP_129S1SvImJ_G0035368.1 mouse_genomes_project 9 113219931 113224924 + MGP_129S1SvImJ_P0094974 Ltf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094975.1 MGP_129S1SvImJ_G0035368.1 mouse_genomes_project 9 113221901 113223019 + Ltf protein_coding retained_intron MGP_129S1SvImJ_T0094976.1 MGP_129S1SvImJ_G0035368.1 mouse_genomes_project 9 113224625 113225997 + Ltf protein_coding retained_intron MGP_129S1SvImJ_T0094977.1 MGP_129S1SvImJ_G0035368.1 mouse_genomes_project 9 113224863 113236343 + MGP_129S1SvImJ_P0094977 Ltf protein_coding protein_coding MGP_129S1SvImJ_T0094978.1 MGP_129S1SvImJ_G0035368.1 mouse_genomes_project 9 113231663 113241014 + MGP_129S1SvImJ_P0094978 Ltf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094979.1 MGP_129S1SvImJ_G0035368.1 mouse_genomes_project 9 113236173 113241014 + Ltf protein_coding retained_intron MGP_129S1SvImJ_T0094980.1 MGP_129S1SvImJ_G0035368.1 mouse_genomes_project 9 113239341 113242863 + MGP_129S1SvImJ_P0094980 Ltf protein_coding protein_coding MGP_129S1SvImJ_T0009295.1 MGP_129S1SvImJ_G0007470.1 mouse_genomes_project 9 84377655 84379397 + Gm2109 lincRNA lincRNA MGP_129S1SvImJ_T0095287.1 MGP_129S1SvImJ_G0035448.1 mouse_genomes_project 9 124716229 124727939 + MGP_129S1SvImJ_P0095287 Zfp651 protein_coding protein_coding MGP_129S1SvImJ_T0101784.1 MGP_129S1SvImJ_G0039758.1 mouse_genomes_project 9 109148805 109149688 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101785.1 MGP_129S1SvImJ_G0039758.1 mouse_genomes_project 9 109149374 109154121 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0102838.1 MGP_129S1SvImJ_G0040670.1 mouse_genomes_project 9 126984944 126997267 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0091743.1 MGP_129S1SvImJ_G0034557.1 mouse_genomes_project 9 34741277 34775087 + MGP_129S1SvImJ_P0091743 Fez1 protein_coding protein_coding MGP_129S1SvImJ_T0091744.1 MGP_129S1SvImJ_G0034557.1 mouse_genomes_project 9 34751985 34806032 + MGP_129S1SvImJ_P0091744 Fez1 protein_coding protein_coding MGP_129S1SvImJ_T0091745.1 MGP_129S1SvImJ_G0034557.1 mouse_genomes_project 9 34752961 34789648 + MGP_129S1SvImJ_P0091745 Fez1 protein_coding protein_coding MGP_129S1SvImJ_T0091746.1 MGP_129S1SvImJ_G0034557.1 mouse_genomes_project 9 34766633 34805748 + MGP_129S1SvImJ_P0091746 Fez1 protein_coding protein_coding MGP_129S1SvImJ_T0091747.1 MGP_129S1SvImJ_G0034557.1 mouse_genomes_project 9 34766752 34794887 + MGP_129S1SvImJ_P0091747 Fez1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091748.1 MGP_129S1SvImJ_G0034557.1 mouse_genomes_project 9 34795984 34797872 + MGP_129S1SvImJ_P0091748 Fez1 protein_coding protein_coding MGP_129S1SvImJ_T0091749.1 MGP_129S1SvImJ_G0034557.1 mouse_genomes_project 9 34797209 34805908 + Fez1 protein_coding retained_intron MGP_129S1SvImJ_T0091750.1 MGP_129S1SvImJ_G0034557.1 mouse_genomes_project 9 34797609 34806028 + MGP_129S1SvImJ_P0091750 Fez1 protein_coding protein_coding MGP_129S1SvImJ_T0094765.1 MGP_129S1SvImJ_G0035328.1 mouse_genomes_project 9 111115917 111144248 - MGP_129S1SvImJ_P0094765 Fbxw21 protein_coding protein_coding MGP_129S1SvImJ_T0094766.1 MGP_129S1SvImJ_G0035328.1 mouse_genomes_project 9 111118831 111144228 - MGP_129S1SvImJ_P0094766 Fbxw21 protein_coding protein_coding MGP_129S1SvImJ_T0094767.1 MGP_129S1SvImJ_G0035328.1 mouse_genomes_project 9 111119746 111125469 - Fbxw21 protein_coding processed_transcript MGP_129S1SvImJ_T0094768.1 MGP_129S1SvImJ_G0035328.1 mouse_genomes_project 9 111125519 111144227 - MGP_129S1SvImJ_P0094768 Fbxw21 protein_coding protein_coding MGP_129S1SvImJ_T0093343.1 MGP_129S1SvImJ_G0035070.1 mouse_genomes_project 9 78954870 78955804 - MGP_129S1SvImJ_P0093343 Gm17324 protein_coding protein_coding MGP_129S1SvImJ_T0005543.1 MGP_129S1SvImJ_G0004679.1 mouse_genomes_project 9 108036199 108039295 + antisense antisense MGP_129S1SvImJ_T0092148.1 MGP_129S1SvImJ_G0034742.1 mouse_genomes_project 9 44455962 44503383 - MGP_129S1SvImJ_P0092148 Rnf214 protein_coding protein_coding MGP_129S1SvImJ_T0092149.1 MGP_129S1SvImJ_G0034742.1 mouse_genomes_project 9 44456232 44503391 - MGP_129S1SvImJ_P0092149 Rnf214 protein_coding protein_coding MGP_129S1SvImJ_T0092150.1 MGP_129S1SvImJ_G0034742.1 mouse_genomes_project 9 44456232 44502911 - MGP_129S1SvImJ_P0092150 Rnf214 protein_coding protein_coding MGP_129S1SvImJ_T0092151.1 MGP_129S1SvImJ_G0034742.1 mouse_genomes_project 9 44456831 44502877 - Rnf214 protein_coding retained_intron MGP_129S1SvImJ_T0092152.1 MGP_129S1SvImJ_G0034742.1 mouse_genomes_project 9 44456840 44503375 - MGP_129S1SvImJ_P0092152 Rnf214 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092153.1 MGP_129S1SvImJ_G0034742.1 mouse_genomes_project 9 44457375 44503408 - MGP_129S1SvImJ_P0092153 Rnf214 protein_coding protein_coding MGP_129S1SvImJ_T0092154.1 MGP_129S1SvImJ_G0034742.1 mouse_genomes_project 9 44461474 44462087 - Rnf214 protein_coding retained_intron MGP_129S1SvImJ_T0092155.1 MGP_129S1SvImJ_G0034742.1 mouse_genomes_project 9 44464165 44464840 - Rnf214 protein_coding retained_intron MGP_129S1SvImJ_T0092156.1 MGP_129S1SvImJ_G0034742.1 mouse_genomes_project 9 44483033 44491062 - Rnf214 protein_coding retained_intron MGP_129S1SvImJ_T0092157.1 MGP_129S1SvImJ_G0034742.1 mouse_genomes_project 9 44483371 44502891 - MGP_129S1SvImJ_P0092157 Rnf214 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092158.1 MGP_129S1SvImJ_G0034742.1 mouse_genomes_project 9 44488553 44495172 - Rnf214 protein_coding retained_intron MGP_129S1SvImJ_T0092117.1 MGP_129S1SvImJ_G0034730.1 mouse_genomes_project 9 43649967 43681663 - MGP_129S1SvImJ_P0092117 Gm10684 protein_coding protein_coding MGP_129S1SvImJ_T0092762.1 MGP_129S1SvImJ_G0034928.1 mouse_genomes_project 9 62753985 62971044 - MGP_129S1SvImJ_P0092762 Map2k5 protein_coding protein_coding MGP_129S1SvImJ_T0092308.1 MGP_129S1SvImJ_G0034792.1 mouse_genomes_project 9 49677408 49749831 + MGP_129S1SvImJ_P0092308 Alg9 protein_coding protein_coding MGP_129S1SvImJ_T0092309.1 MGP_129S1SvImJ_G0034792.1 mouse_genomes_project 9 49677694 49749845 + MGP_129S1SvImJ_P0092309 Alg9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092310.1 MGP_129S1SvImJ_G0034792.1 mouse_genomes_project 9 49677756 49693490 + MGP_129S1SvImJ_P0092310 Alg9 protein_coding protein_coding MGP_129S1SvImJ_T0092311.1 MGP_129S1SvImJ_G0034792.1 mouse_genomes_project 9 49677935 49685753 + Alg9 protein_coding processed_transcript MGP_129S1SvImJ_T0092312.1 MGP_129S1SvImJ_G0034792.1 mouse_genomes_project 9 49678505 49681484 + Alg9 protein_coding processed_transcript MGP_129S1SvImJ_T0092313.1 MGP_129S1SvImJ_G0034792.1 mouse_genomes_project 9 49706269 49749067 + MGP_129S1SvImJ_P0092313 Alg9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092314.1 MGP_129S1SvImJ_G0034792.1 mouse_genomes_project 9 49712875 49749665 + MGP_129S1SvImJ_P0092314 Alg9 protein_coding protein_coding MGP_129S1SvImJ_T0092315.1 MGP_129S1SvImJ_G0034792.1 mouse_genomes_project 9 49727185 49749275 + Alg9 protein_coding processed_transcript MGP_129S1SvImJ_T0092316.1 MGP_129S1SvImJ_G0034792.1 mouse_genomes_project 9 49741905 49749394 + Alg9 protein_coding processed_transcript MGP_129S1SvImJ_T0011101.1 MGP_129S1SvImJ_G0009217.1 mouse_genomes_project 9 69450830 69450918 + Mir3109 miRNA miRNA MGP_129S1SvImJ_T0093653.1 MGP_129S1SvImJ_G0035135.1 mouse_genomes_project 9 96683735 96692098 + MGP_129S1SvImJ_P0093653 Paqr9 protein_coding protein_coding MGP_129S1SvImJ_T0101447.1 MGP_129S1SvImJ_G0039514.1 mouse_genomes_project 9 36574195 36574319 + Gm23271 snoRNA snoRNA MGP_129S1SvImJ_T0093821.1 MGP_129S1SvImJ_G0035173.1 mouse_genomes_project 9 101007793 101016094 + MGP_129S1SvImJ_P0093821 Dzip1l protein_coding protein_coding MGP_129S1SvImJ_T0093822.1 MGP_129S1SvImJ_G0035173.1 mouse_genomes_project 9 101007839 101052108 + MGP_129S1SvImJ_P0093822 Dzip1l protein_coding protein_coding MGP_129S1SvImJ_T0093823.1 MGP_129S1SvImJ_G0035173.1 mouse_genomes_project 9 101007875 101052108 + MGP_129S1SvImJ_P0093823 Dzip1l protein_coding protein_coding MGP_129S1SvImJ_T0093824.1 MGP_129S1SvImJ_G0035173.1 mouse_genomes_project 9 101008140 101052108 + MGP_129S1SvImJ_P0093824 Dzip1l protein_coding protein_coding MGP_129S1SvImJ_T0093825.1 MGP_129S1SvImJ_G0035173.1 mouse_genomes_project 9 101013158 101052015 + MGP_129S1SvImJ_P0093825 Dzip1l protein_coding protein_coding MGP_129S1SvImJ_T0093826.1 MGP_129S1SvImJ_G0035173.1 mouse_genomes_project 9 101022250 101029068 + Dzip1l protein_coding processed_transcript MGP_129S1SvImJ_T0093827.1 MGP_129S1SvImJ_G0035173.1 mouse_genomes_project 9 101028347 101031817 + Dzip1l protein_coding retained_intron MGP_129S1SvImJ_T0016125.1 MGP_129S1SvImJ_G0014214.1 mouse_genomes_project 9 93676055 93676521 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002404.1 MGP_129S1SvImJ_G0002314.1 mouse_genomes_project 9 73092791 73094232 + TEC TEC MGP_129S1SvImJ_T0009287.1 MGP_129S1SvImJ_G0007464.1 mouse_genomes_project 9 79770368 79770807 + Gm28620 lincRNA lincRNA MGP_129S1SvImJ_T0095399.1 MGP_129S1SvImJ_G0035492.1 mouse_genomes_project 9 127230854 127242413 + MGP_129S1SvImJ_P0095399 Ccr2 protein_coding protein_coding MGP_129S1SvImJ_T0095400.1 MGP_129S1SvImJ_G0035492.1 mouse_genomes_project 9 127231051 127237992 + MGP_129S1SvImJ_P0095400 Ccr2 protein_coding protein_coding MGP_129S1SvImJ_T0095401.1 MGP_129S1SvImJ_G0035492.1 mouse_genomes_project 9 127231076 127237402 + MGP_129S1SvImJ_P0095401 Ccr2 protein_coding protein_coding MGP_129S1SvImJ_T0095402.1 MGP_129S1SvImJ_G0035492.1 mouse_genomes_project 9 127234485 127237992 + MGP_129S1SvImJ_P0095402 Ccr2 protein_coding protein_coding MGP_129S1SvImJ_T0091608.1 MGP_129S1SvImJ_G0034519.1 mouse_genomes_project 9 29071305 29111923 + MGP_129S1SvImJ_P0091608 Nfrkb protein_coding protein_coding MGP_129S1SvImJ_T0091609.1 MGP_129S1SvImJ_G0034519.1 mouse_genomes_project 9 29071310 29111923 + MGP_129S1SvImJ_P0091609 Nfrkb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091610.1 MGP_129S1SvImJ_G0034519.1 mouse_genomes_project 9 29071317 29083239 + MGP_129S1SvImJ_P0091610 Nfrkb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091611.1 MGP_129S1SvImJ_G0034519.1 mouse_genomes_project 9 29071318 29107809 + MGP_129S1SvImJ_P0091611 Nfrkb protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091612.1 MGP_129S1SvImJ_G0034519.1 mouse_genomes_project 9 29071319 29107934 + MGP_129S1SvImJ_P0091612 Nfrkb protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091613.1 MGP_129S1SvImJ_G0034519.1 mouse_genomes_project 9 29071326 29111923 + MGP_129S1SvImJ_P0091613 Nfrkb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091614.1 MGP_129S1SvImJ_G0034519.1 mouse_genomes_project 9 29081281 29087690 + Nfrkb protein_coding retained_intron MGP_129S1SvImJ_T0091615.1 MGP_129S1SvImJ_G0034519.1 mouse_genomes_project 9 29085723 29087662 + Nfrkb protein_coding retained_intron MGP_129S1SvImJ_T0091616.1 MGP_129S1SvImJ_G0034519.1 mouse_genomes_project 9 29087710 29111923 + Nfrkb protein_coding retained_intron MGP_129S1SvImJ_T0091617.1 MGP_129S1SvImJ_G0034519.1 mouse_genomes_project 9 29098311 29099357 + Nfrkb protein_coding retained_intron MGP_129S1SvImJ_T0091382.1 MGP_129S1SvImJ_G0034433.1 mouse_genomes_project 9 18134522 18147266 - MGP_129S1SvImJ_P0091382 S1pr2 protein_coding protein_coding MGP_129S1SvImJ_T0016035.1 MGP_129S1SvImJ_G0014124.1 mouse_genomes_project 9 22511152 22511230 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009320.1 MGP_129S1SvImJ_G0007488.1 mouse_genomes_project 9 98315565 98320618 + Gm26767 lincRNA lincRNA MGP_129S1SvImJ_T0092720.1 MGP_129S1SvImJ_G0034915.1 mouse_genomes_project 9 61413869 61415124 - MGP_129S1SvImJ_P0092720 Rplp1 protein_coding protein_coding MGP_129S1SvImJ_T0092090.1 MGP_129S1SvImJ_G0034720.1 mouse_genomes_project 9 43328905 43332453 - MGP_129S1SvImJ_P0092090 Ttc36 protein_coding protein_coding MGP_129S1SvImJ_T0092044.1 MGP_129S1SvImJ_G0034710.1 mouse_genomes_project 9 42922695 42929363 - MGP_129S1SvImJ_P0092044 Foxr1 protein_coding protein_coding MGP_129S1SvImJ_T0016130.1 MGP_129S1SvImJ_G0014219.1 mouse_genomes_project 9 95537195 95537541 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0092274.1 MGP_129S1SvImJ_G0034785.1 mouse_genomes_project 9 49529604 49558188 - MGP_129S1SvImJ_P0092274 Dlat protein_coding protein_coding MGP_129S1SvImJ_T0092275.1 MGP_129S1SvImJ_G0034785.1 mouse_genomes_project 9 49531496 49540524 - Dlat protein_coding retained_intron MGP_129S1SvImJ_T0092276.1 MGP_129S1SvImJ_G0034785.1 mouse_genomes_project 9 49532428 49542353 - Dlat protein_coding processed_transcript MGP_129S1SvImJ_T0092277.1 MGP_129S1SvImJ_G0034785.1 mouse_genomes_project 9 49534872 49540225 - Dlat protein_coding retained_intron MGP_129S1SvImJ_T0092278.1 MGP_129S1SvImJ_G0034785.1 mouse_genomes_project 9 49535190 49543898 - Dlat protein_coding processed_transcript MGP_129S1SvImJ_T0092279.1 MGP_129S1SvImJ_G0034785.1 mouse_genomes_project 9 49540195 49546134 - Dlat protein_coding retained_intron MGP_129S1SvImJ_T0009303.1 MGP_129S1SvImJ_G0007476.1 mouse_genomes_project 9 91028623 91030331 + Gm26882 lincRNA lincRNA MGP_129S1SvImJ_T0093517.1 MGP_129S1SvImJ_G0035102.1 mouse_genomes_project 9 87890341 87949382 + MGP_129S1SvImJ_P0093517 Cyb5r4 protein_coding protein_coding MGP_129S1SvImJ_T0093518.1 MGP_129S1SvImJ_G0035102.1 mouse_genomes_project 9 87890414 87941902 + Cyb5r4 protein_coding processed_transcript MGP_129S1SvImJ_T0093519.1 MGP_129S1SvImJ_G0035102.1 mouse_genomes_project 9 87897840 87915849 + Cyb5r4 protein_coding retained_intron MGP_129S1SvImJ_T0095222.1 MGP_129S1SvImJ_G0035434.1 mouse_genomes_project 9 123143505 123329802 + MGP_129S1SvImJ_P0095222 Myrip protein_coding protein_coding MGP_129S1SvImJ_T0095223.1 MGP_129S1SvImJ_G0035434.1 mouse_genomes_project 9 123234358 123277411 + MGP_129S1SvImJ_P0095223 Myrip protein_coding protein_coding MGP_129S1SvImJ_T0095224.1 MGP_129S1SvImJ_G0035434.1 mouse_genomes_project 9 123260495 123269958 + Myrip protein_coding processed_transcript MGP_129S1SvImJ_T0095225.1 MGP_129S1SvImJ_G0035434.1 mouse_genomes_project 9 123280155 123285233 + Myrip protein_coding processed_transcript MGP_129S1SvImJ_T0091997.1 MGP_129S1SvImJ_G0034693.1 mouse_genomes_project 9 42598412 42602869 + MGP_129S1SvImJ_P0091997 Mcam protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091998.1 MGP_129S1SvImJ_G0034693.1 mouse_genomes_project 9 42598592 42605735 + MGP_129S1SvImJ_P0091998 Mcam protein_coding protein_coding MGP_129S1SvImJ_T0091999.1 MGP_129S1SvImJ_G0034693.1 mouse_genomes_project 9 42600486 42601211 + MGP_129S1SvImJ_P0091999 Mcam protein_coding protein_coding MGP_129S1SvImJ_T0092000.1 MGP_129S1SvImJ_G0034693.1 mouse_genomes_project 9 42600803 42603616 + Mcam protein_coding retained_intron MGP_129S1SvImJ_T0091971.1 MGP_129S1SvImJ_G0034688.1 mouse_genomes_project 9 42488489 42493710 + MGP_129S1SvImJ_P0091971 Thy1 protein_coding protein_coding MGP_129S1SvImJ_T0091067.1 MGP_129S1SvImJ_G0034306.1 mouse_genomes_project 9 103631 180523 + MGP_129S1SvImJ_P0091067 Cwf19l2 protein_coding protein_coding MGP_129S1SvImJ_T0002373.1 MGP_129S1SvImJ_G0002283.1 mouse_genomes_project 9 30261167 30263806 - TEC TEC MGP_129S1SvImJ_T0002445.1 MGP_129S1SvImJ_G0002354.1 mouse_genomes_project 9 100019842 100020357 - TEC TEC MGP_129S1SvImJ_T0005496.1 MGP_129S1SvImJ_G0004647.1 mouse_genomes_project 9 72789094 72789922 - Gm27232 antisense antisense MGP_129S1SvImJ_T0100155.1 MGP_129S1SvImJ_G0038222.1 mouse_genomes_project 9 12189886 12190041 - Gm22658 snRNA snRNA MGP_129S1SvImJ_T0091881.1 MGP_129S1SvImJ_G0034642.1 mouse_genomes_project 9 37847044 37848074 - MGP_129S1SvImJ_P0091881 Olfr149 protein_coding protein_coding MGP_129S1SvImJ_T0092801.1 MGP_129S1SvImJ_G0034936.1 mouse_genomes_project 9 63819156 63824335 + MGP_129S1SvImJ_P0092801 Rpl4 protein_coding protein_coding MGP_129S1SvImJ_T0091399.1 MGP_129S1SvImJ_G0034444.1 mouse_genomes_project 9 18423210 18432813 - MGP_129S1SvImJ_P0091399 Keap1 protein_coding protein_coding MGP_129S1SvImJ_T0091400.1 MGP_129S1SvImJ_G0034444.1 mouse_genomes_project 9 18423211 18432552 - MGP_129S1SvImJ_P0091400 Keap1 protein_coding protein_coding MGP_129S1SvImJ_T0091401.1 MGP_129S1SvImJ_G0034444.1 mouse_genomes_project 9 18423547 18432294 - MGP_129S1SvImJ_P0091401 Keap1 protein_coding protein_coding MGP_129S1SvImJ_T0091402.1 MGP_129S1SvImJ_G0034444.1 mouse_genomes_project 9 18424113 18432560 - MGP_129S1SvImJ_P0091402 Keap1 protein_coding protein_coding MGP_129S1SvImJ_T0091403.1 MGP_129S1SvImJ_G0034444.1 mouse_genomes_project 9 18429603 18430674 - Keap1 protein_coding processed_transcript MGP_129S1SvImJ_T0094779.1 MGP_129S1SvImJ_G0035336.1 mouse_genomes_project 9 111903883 111913682 + MGP_129S1SvImJ_P0094779 Spink8 protein_coding protein_coding MGP_129S1SvImJ_T0094780.1 MGP_129S1SvImJ_G0035336.1 mouse_genomes_project 9 111909448 111919729 + MGP_129S1SvImJ_P0094780 Spink8 protein_coding protein_coding MGP_129S1SvImJ_T0094781.1 MGP_129S1SvImJ_G0035336.1 mouse_genomes_project 9 111909531 111919724 + MGP_129S1SvImJ_P0094781 Spink8 protein_coding protein_coding MGP_129S1SvImJ_T0091814.1 MGP_129S1SvImJ_G0034587.1 mouse_genomes_project 9 36228017 36228968 - MGP_129S1SvImJ_P0091814 Olfr891 protein_coding protein_coding MGP_129S1SvImJ_T0094172.1 MGP_129S1SvImJ_G0035242.1 mouse_genomes_project 9 108476308 108504860 - MGP_129S1SvImJ_P0094172 Tex264 protein_coding protein_coding MGP_129S1SvImJ_T0094173.1 MGP_129S1SvImJ_G0035242.1 mouse_genomes_project 9 108476308 108504719 - MGP_129S1SvImJ_P0094173 Tex264 protein_coding protein_coding MGP_129S1SvImJ_T0094174.1 MGP_129S1SvImJ_G0035242.1 mouse_genomes_project 9 108476314 108504952 - MGP_129S1SvImJ_P0094174 Tex264 protein_coding protein_coding MGP_129S1SvImJ_T0094175.1 MGP_129S1SvImJ_G0035242.1 mouse_genomes_project 9 108476554 108481548 - Tex264 protein_coding processed_transcript MGP_129S1SvImJ_T0094176.1 MGP_129S1SvImJ_G0035242.1 mouse_genomes_project 9 108476610 108504956 - Tex264 protein_coding processed_transcript MGP_129S1SvImJ_T0094177.1 MGP_129S1SvImJ_G0035242.1 mouse_genomes_project 9 108476799 108504964 - Tex264 protein_coding processed_transcript MGP_129S1SvImJ_T0094178.1 MGP_129S1SvImJ_G0035242.1 mouse_genomes_project 9 108479960 108504946 - Tex264 protein_coding processed_transcript MGP_129S1SvImJ_T0094179.1 MGP_129S1SvImJ_G0035242.1 mouse_genomes_project 9 108495587 108504342 - Tex264 protein_coding processed_transcript MGP_129S1SvImJ_T0094180.1 MGP_129S1SvImJ_G0035242.1 mouse_genomes_project 9 108503972 108504940 - Tex264 protein_coding processed_transcript MGP_129S1SvImJ_T0094427.1 MGP_129S1SvImJ_G0035277.1 mouse_genomes_project 9 109897993 109911295 + Gm20661 protein_coding retained_intron MGP_129S1SvImJ_T0094428.1 MGP_129S1SvImJ_G0035277.1 mouse_genomes_project 9 109898028 109910330 + Gm20661 protein_coding retained_intron MGP_129S1SvImJ_T0094429.1 MGP_129S1SvImJ_G0035277.1 mouse_genomes_project 9 109898222 109910850 + MGP_129S1SvImJ_P0094429 Gm20661 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091899.1 MGP_129S1SvImJ_G0034660.1 mouse_genomes_project 9 38281007 38282549 - MGP_129S1SvImJ_P0091899 Olfr983 protein_coding protein_coding MGP_129S1SvImJ_T0018568.1 MGP_129S1SvImJ_G0015740.1 mouse_genomes_project 9 62992558 63098828 + Gm16759 processed_transcript lincRNA MGP_129S1SvImJ_T0018569.1 MGP_129S1SvImJ_G0015740.1 mouse_genomes_project 9 62993331 63174939 + Gm16759 processed_transcript lincRNA MGP_129S1SvImJ_T0018570.1 MGP_129S1SvImJ_G0015740.1 mouse_genomes_project 9 62993338 63021294 + Gm16759 processed_transcript lincRNA MGP_129S1SvImJ_T0018571.1 MGP_129S1SvImJ_G0015740.1 mouse_genomes_project 9 63136317 63173270 + Gm16759 processed_transcript processed_transcript MGP_129S1SvImJ_T0091479.1 MGP_129S1SvImJ_G0034471.1 mouse_genomes_project 9 19245593 19264830 - MGP_129S1SvImJ_P0091479 Rgl3 protein_coding protein_coding MGP_129S1SvImJ_T0091696.1 MGP_129S1SvImJ_G0034539.1 mouse_genomes_project 9 33385692 33503514 + MGP_129S1SvImJ_P0091696 Pate2 protein_coding protein_coding MGP_129S1SvImJ_T0091697.1 MGP_129S1SvImJ_G0034539.1 mouse_genomes_project 9 33389316 33460050 + Pate2 protein_coding processed_transcript MGP_129S1SvImJ_T0091700.1 MGP_129S1SvImJ_G0034539.1 mouse_genomes_project 9 33484675 33487926 + MGP_129S1SvImJ_P0091700 Pate2 protein_coding protein_coding MGP_129S1SvImJ_T0091701.1 MGP_129S1SvImJ_G0034539.1 mouse_genomes_project 9 33484687 33486452 + Pate2 protein_coding retained_intron MGP_129S1SvImJ_T0093472.1 MGP_129S1SvImJ_G0035095.1 mouse_genomes_project 9 87289102 87385683 + MGP_129S1SvImJ_P0093472 Dopey1 protein_coding protein_coding MGP_129S1SvImJ_T0093473.1 MGP_129S1SvImJ_G0035095.1 mouse_genomes_project 9 87289118 87336365 + Dopey1 protein_coding retained_intron MGP_129S1SvImJ_T0093474.1 MGP_129S1SvImJ_G0035095.1 mouse_genomes_project 9 87289122 87384078 + MGP_129S1SvImJ_P0093474 Dopey1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0093475.1 MGP_129S1SvImJ_G0035095.1 mouse_genomes_project 9 87289127 87331265 + Dopey1 protein_coding retained_intron MGP_129S1SvImJ_T0093476.1 MGP_129S1SvImJ_G0035095.1 mouse_genomes_project 9 87289159 87332389 + Dopey1 protein_coding retained_intron MGP_129S1SvImJ_T0093477.1 MGP_129S1SvImJ_G0035095.1 mouse_genomes_project 9 87289159 87341107 + MGP_129S1SvImJ_P0093477 Dopey1 protein_coding protein_coding MGP_129S1SvImJ_T0093478.1 MGP_129S1SvImJ_G0035095.1 mouse_genomes_project 9 87289162 87385561 + MGP_129S1SvImJ_P0093478 Dopey1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093479.1 MGP_129S1SvImJ_G0035095.1 mouse_genomes_project 9 87308939 87385563 + MGP_129S1SvImJ_P0093479 Dopey1 protein_coding protein_coding MGP_129S1SvImJ_T0093480.1 MGP_129S1SvImJ_G0035095.1 mouse_genomes_project 9 87312569 87315376 + Dopey1 protein_coding retained_intron MGP_129S1SvImJ_T0093481.1 MGP_129S1SvImJ_G0035095.1 mouse_genomes_project 9 87314904 87317826 + Dopey1 protein_coding retained_intron MGP_129S1SvImJ_T0093482.1 MGP_129S1SvImJ_G0035095.1 mouse_genomes_project 9 87325119 87329092 + Dopey1 protein_coding retained_intron MGP_129S1SvImJ_T0093483.1 MGP_129S1SvImJ_G0035095.1 mouse_genomes_project 9 87331735 87335642 + Dopey1 protein_coding retained_intron MGP_129S1SvImJ_T0093484.1 MGP_129S1SvImJ_G0035095.1 mouse_genomes_project 9 87332027 87344454 + Dopey1 protein_coding retained_intron MGP_129S1SvImJ_T0093485.1 MGP_129S1SvImJ_G0035095.1 mouse_genomes_project 9 87350245 87354188 + MGP_129S1SvImJ_P0093485 Dopey1 protein_coding protein_coding MGP_129S1SvImJ_T0093486.1 MGP_129S1SvImJ_G0035095.1 mouse_genomes_project 9 87352594 87376274 + Dopey1 protein_coding retained_intron MGP_129S1SvImJ_T0093487.1 MGP_129S1SvImJ_G0035095.1 mouse_genomes_project 9 87358432 87384382 + Dopey1 protein_coding retained_intron MGP_129S1SvImJ_T0093488.1 MGP_129S1SvImJ_G0035095.1 mouse_genomes_project 9 87361100 87384387 + MGP_129S1SvImJ_P0093488 Dopey1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093489.1 MGP_129S1SvImJ_G0035095.1 mouse_genomes_project 9 87372564 87378904 + Dopey1 protein_coding retained_intron MGP_129S1SvImJ_T0093490.1 MGP_129S1SvImJ_G0035095.1 mouse_genomes_project 9 87379403 87384387 + Dopey1 protein_coding retained_intron MGP_129S1SvImJ_T0093840.1 MGP_129S1SvImJ_G0035177.1 mouse_genomes_project 9 101933342 101988637 - MGP_129S1SvImJ_P0093840 Nck1 protein_coding protein_coding MGP_129S1SvImJ_T0093841.1 MGP_129S1SvImJ_G0035177.1 mouse_genomes_project 9 101936052 101947908 - MGP_129S1SvImJ_P0093841 Nck1 protein_coding protein_coding MGP_129S1SvImJ_T0093842.1 MGP_129S1SvImJ_G0035177.1 mouse_genomes_project 9 101938626 101988625 - MGP_129S1SvImJ_P0093842 Nck1 protein_coding protein_coding MGP_129S1SvImJ_T0093843.1 MGP_129S1SvImJ_G0035177.1 mouse_genomes_project 9 101938849 101988234 - MGP_129S1SvImJ_P0093843 Nck1 protein_coding protein_coding MGP_129S1SvImJ_T0016050.1 MGP_129S1SvImJ_G0014139.1 mouse_genomes_project 9 42821090 42822203 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095226.1 MGP_129S1SvImJ_G0035435.1 mouse_genomes_project 9 123347953 123350482 + MGP_129S1SvImJ_P0095226 Eif1b protein_coding protein_coding MGP_129S1SvImJ_T0091712.1 MGP_129S1SvImJ_G0034550.1 mouse_genomes_project 9 34447104 34456666 - MGP_129S1SvImJ_P0091712 Gm5615 protein_coding protein_coding MGP_129S1SvImJ_T0009261.1 MGP_129S1SvImJ_G0007444.1 mouse_genomes_project 9 60158279 60185461 + 1700036A12Rik lincRNA lincRNA MGP_129S1SvImJ_T0009262.1 MGP_129S1SvImJ_G0007444.1 mouse_genomes_project 9 60184787 60185141 + 1700036A12Rik lincRNA lincRNA MGP_129S1SvImJ_T0009260.1 MGP_129S1SvImJ_G0007443.1 mouse_genomes_project 9 60110068 60112739 + B930082K07Rik lincRNA lincRNA MGP_129S1SvImJ_T0091702.1 MGP_129S1SvImJ_G0034542.1 mouse_genomes_project 9 33498275 33500567 - MGP_129S1SvImJ_P0091702 Pate1 protein_coding protein_coding MGP_129S1SvImJ_T0091703.1 MGP_129S1SvImJ_G0034542.1 mouse_genomes_project 9 33498621 33500586 - Pate1 protein_coding retained_intron MGP_129S1SvImJ_T0091792.1 MGP_129S1SvImJ_G0034570.1 mouse_genomes_project 9 35615768 35651915 + MGP_129S1SvImJ_P0091792 Siae protein_coding protein_coding MGP_129S1SvImJ_T0093011.1 MGP_129S1SvImJ_G0034994.1 mouse_genomes_project 9 70019703 70039618 + MGP_129S1SvImJ_P0093011 Bnip2 protein_coding protein_coding MGP_129S1SvImJ_T0093012.1 MGP_129S1SvImJ_G0034994.1 mouse_genomes_project 9 70019741 70039556 + MGP_129S1SvImJ_P0093012 Bnip2 protein_coding protein_coding MGP_129S1SvImJ_T0093013.1 MGP_129S1SvImJ_G0034994.1 mouse_genomes_project 9 70019752 70035305 + MGP_129S1SvImJ_P0093013 Bnip2 protein_coding protein_coding MGP_129S1SvImJ_T0093014.1 MGP_129S1SvImJ_G0034994.1 mouse_genomes_project 9 70019754 70030456 + MGP_129S1SvImJ_P0093014 Bnip2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093015.1 MGP_129S1SvImJ_G0034994.1 mouse_genomes_project 9 70025716 70038416 + MGP_129S1SvImJ_P0093015 Bnip2 protein_coding protein_coding MGP_129S1SvImJ_T0093016.1 MGP_129S1SvImJ_G0034994.1 mouse_genomes_project 9 70028473 70033536 + Bnip2 protein_coding retained_intron MGP_129S1SvImJ_T0093017.1 MGP_129S1SvImJ_G0034994.1 mouse_genomes_project 9 70029529 70034935 + Bnip2 protein_coding processed_transcript MGP_129S1SvImJ_T0093018.1 MGP_129S1SvImJ_G0034994.1 mouse_genomes_project 9 70034676 70036060 + MGP_129S1SvImJ_P0093018 Bnip2 protein_coding protein_coding MGP_129S1SvImJ_T0091387.1 MGP_129S1SvImJ_G0034438.1 mouse_genomes_project 9 18244722 18249394 - MGP_129S1SvImJ_P0091387 Zglp1 protein_coding protein_coding MGP_129S1SvImJ_T0101441.1 MGP_129S1SvImJ_G0039508.1 mouse_genomes_project 9 22362704 22362838 + Gm23893 snoRNA snoRNA MGP_129S1SvImJ_T0092243.1 MGP_129S1SvImJ_G0034772.1 mouse_genomes_project 9 48238824 48254253 - MGP_129S1SvImJ_P0092243 Ankk1 protein_coding protein_coding MGP_129S1SvImJ_T0092912.1 MGP_129S1SvImJ_G0034972.1 mouse_genomes_project 9 65890803 65929613 - MGP_129S1SvImJ_P0092912 Snx1 protein_coding protein_coding MGP_129S1SvImJ_T0092913.1 MGP_129S1SvImJ_G0034972.1 mouse_genomes_project 9 65891794 65894019 - Snx1 protein_coding retained_intron MGP_129S1SvImJ_T0092914.1 MGP_129S1SvImJ_G0034972.1 mouse_genomes_project 9 65896858 65899247 - Snx1 protein_coding retained_intron MGP_129S1SvImJ_T0092915.1 MGP_129S1SvImJ_G0034972.1 mouse_genomes_project 9 65899214 65905664 - Snx1 protein_coding retained_intron MGP_129S1SvImJ_T0092916.1 MGP_129S1SvImJ_G0034972.1 mouse_genomes_project 9 65900061 65931318 - MGP_129S1SvImJ_P0092916 Snx1 protein_coding protein_coding MGP_129S1SvImJ_T0092917.1 MGP_129S1SvImJ_G0034972.1 mouse_genomes_project 9 65908383 65909637 - Snx1 protein_coding retained_intron MGP_129S1SvImJ_T0092918.1 MGP_129S1SvImJ_G0034972.1 mouse_genomes_project 9 65913058 65929524 - Snx1 protein_coding retained_intron MGP_129S1SvImJ_T0016110.1 MGP_129S1SvImJ_G0014199.1 mouse_genomes_project 9 88900748 88901336 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002446.1 MGP_129S1SvImJ_G0002355.1 mouse_genomes_project 9 100611355 100613110 - TEC TEC MGP_129S1SvImJ_T0002485.1 MGP_129S1SvImJ_G0002394.1 mouse_genomes_project 9 110895442 110895981 - TEC TEC MGP_129S1SvImJ_T0009254.1 MGP_129S1SvImJ_G0007437.1 mouse_genomes_project 9 56244689 56245487 - 2700012I20Rik lincRNA lincRNA MGP_129S1SvImJ_T0091803.1 MGP_129S1SvImJ_G0034577.1 mouse_genomes_project 9 35926253 35927304 + MGP_129S1SvImJ_P0091803 Olfr145 protein_coding protein_coding MGP_129S1SvImJ_T0005535.1 MGP_129S1SvImJ_G0004673.1 mouse_genomes_project 9 105097798 105118764 + Gm16252 antisense antisense MGP_129S1SvImJ_T0101463.1 MGP_129S1SvImJ_G0039530.1 mouse_genomes_project 9 63822892 63822963 + Gm22455 snoRNA snoRNA MGP_129S1SvImJ_T0094670.1 MGP_129S1SvImJ_G0035313.1 mouse_genomes_project 9 110799359 110809837 + MGP_129S1SvImJ_P0094670 Nckipsd protein_coding protein_coding MGP_129S1SvImJ_T0094671.1 MGP_129S1SvImJ_G0035313.1 mouse_genomes_project 9 110799364 110802141 + MGP_129S1SvImJ_P0094671 Nckipsd protein_coding protein_coding MGP_129S1SvImJ_T0094672.1 MGP_129S1SvImJ_G0035313.1 mouse_genomes_project 9 110799412 110802597 + MGP_129S1SvImJ_P0094672 Nckipsd protein_coding protein_coding MGP_129S1SvImJ_T0094673.1 MGP_129S1SvImJ_G0035313.1 mouse_genomes_project 9 110802916 110805073 + MGP_129S1SvImJ_P0094673 Nckipsd protein_coding protein_coding MGP_129S1SvImJ_T0094674.1 MGP_129S1SvImJ_G0035313.1 mouse_genomes_project 9 110804419 110805318 + Nckipsd protein_coding retained_intron MGP_129S1SvImJ_T0094675.1 MGP_129S1SvImJ_G0035313.1 mouse_genomes_project 9 110805827 110807114 + Nckipsd protein_coding retained_intron MGP_129S1SvImJ_T0093776.1 MGP_129S1SvImJ_G0035159.1 mouse_genomes_project 9 100176663 100177693 + MGP_129S1SvImJ_P0093776 protein_coding protein_coding MGP_129S1SvImJ_T0094937.1 MGP_129S1SvImJ_G0035357.1 mouse_genomes_project 9 113000417 113004424 + MGP_129S1SvImJ_P0094937 Prss44 protein_coding protein_coding MGP_129S1SvImJ_T0094938.1 MGP_129S1SvImJ_G0035357.1 mouse_genomes_project 9 113000450 113010933 + MGP_129S1SvImJ_P0094938 Prss44 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094939.1 MGP_129S1SvImJ_G0035357.1 mouse_genomes_project 9 113000874 113002953 + MGP_129S1SvImJ_P0094939 Prss44 protein_coding protein_coding MGP_129S1SvImJ_T0094940.1 MGP_129S1SvImJ_G0035357.1 mouse_genomes_project 9 113001640 113003373 + Prss44 protein_coding retained_intron MGP_129S1SvImJ_T0094533.1 MGP_129S1SvImJ_G0035295.1 mouse_genomes_project 9 110347793 110368612 + MGP_129S1SvImJ_P0094533 1700102P08Rik protein_coding protein_coding MGP_129S1SvImJ_T0094534.1 MGP_129S1SvImJ_G0035295.1 mouse_genomes_project 9 110347822 110352760 + MGP_129S1SvImJ_P0094534 1700102P08Rik protein_coding protein_coding MGP_129S1SvImJ_T0092559.1 MGP_129S1SvImJ_G0034879.1 mouse_genomes_project 9 57028643 57074983 - MGP_129S1SvImJ_P0092559 Arid3b protein_coding protein_coding MGP_129S1SvImJ_T0092560.1 MGP_129S1SvImJ_G0034879.1 mouse_genomes_project 9 57028646 57074985 - MGP_129S1SvImJ_P0092560 Arid3b protein_coding protein_coding MGP_129S1SvImJ_T0092561.1 MGP_129S1SvImJ_G0034879.1 mouse_genomes_project 9 57028649 57029937 - Arid3b protein_coding processed_transcript MGP_129S1SvImJ_T0092562.1 MGP_129S1SvImJ_G0034879.1 mouse_genomes_project 9 57028801 57072533 - MGP_129S1SvImJ_P0092562 Arid3b protein_coding protein_coding MGP_129S1SvImJ_T0092563.1 MGP_129S1SvImJ_G0034879.1 mouse_genomes_project 9 57030449 57034493 - MGP_129S1SvImJ_P0092563 Arid3b protein_coding protein_coding MGP_129S1SvImJ_T0092564.1 MGP_129S1SvImJ_G0034879.1 mouse_genomes_project 9 57030711 57074755 - MGP_129S1SvImJ_P0092564 Arid3b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092565.1 MGP_129S1SvImJ_G0034879.1 mouse_genomes_project 9 57032957 57075038 - MGP_129S1SvImJ_P0092565 Arid3b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092566.1 MGP_129S1SvImJ_G0034879.1 mouse_genomes_project 9 57032958 57075070 - MGP_129S1SvImJ_P0092566 Arid3b protein_coding protein_coding MGP_129S1SvImJ_T0092567.1 MGP_129S1SvImJ_G0034879.1 mouse_genomes_project 9 57036421 57058784 - MGP_129S1SvImJ_P0092567 Arid3b protein_coding protein_coding MGP_129S1SvImJ_T0092568.1 MGP_129S1SvImJ_G0034879.1 mouse_genomes_project 9 57046502 57075047 - Arid3b protein_coding retained_intron MGP_129S1SvImJ_T0092434.1 MGP_129S1SvImJ_G0034835.1 mouse_genomes_project 9 54051934 54087182 + MGP_129S1SvImJ_P0092434 Chrna5 protein_coding protein_coding MGP_129S1SvImJ_T0092435.1 MGP_129S1SvImJ_G0034835.1 mouse_genomes_project 9 54052670 54085978 + MGP_129S1SvImJ_P0092435 Chrna5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0016088.1 MGP_129S1SvImJ_G0014177.1 mouse_genomes_project 9 77399387 77399592 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009218.1 MGP_129S1SvImJ_G0007407.1 mouse_genomes_project 9 18618433 18624912 - Gm16853 lincRNA lincRNA MGP_129S1SvImJ_T0005498.1 MGP_129S1SvImJ_G0004649.1 mouse_genomes_project 9 76688845 76690115 + Gm27234 antisense antisense MGP_129S1SvImJ_T0016155.1 MGP_129S1SvImJ_G0014244.1 mouse_genomes_project 9 105035730 105036107 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095130.1 MGP_129S1SvImJ_G0035406.1 mouse_genomes_project 9 121187628 121267432 + MGP_129S1SvImJ_P0095130 Golga4 protein_coding protein_coding MGP_129S1SvImJ_T0095131.1 MGP_129S1SvImJ_G0035406.1 mouse_genomes_project 9 121187796 121264481 + MGP_129S1SvImJ_P0095131 Golga4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0002496.1 MGP_129S1SvImJ_G0002405.1 mouse_genomes_project 9 123009759 123010393 + TEC TEC MGP_129S1SvImJ_T0091627.1 MGP_129S1SvImJ_G0034523.1 mouse_genomes_project 9 30056398 30088480 - MGP_129S1SvImJ_P0091627 Kcnj5 protein_coding protein_coding MGP_129S1SvImJ_T0100185.1 MGP_129S1SvImJ_G0038252.1 mouse_genomes_project 9 66862042 66862140 - Gm24225 snRNA snRNA MGP_129S1SvImJ_T0091817.1 MGP_129S1SvImJ_G0034590.1 mouse_genomes_project 9 36297750 36298692 + MGP_129S1SvImJ_P0091817 Olfr143 protein_coding protein_coding MGP_129S1SvImJ_T0016040.1 MGP_129S1SvImJ_G0014129.1 mouse_genomes_project 9 31997393 31997955 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0092847.1 MGP_129S1SvImJ_G0034952.1 mouse_genomes_project 9 64984717 65000142 + MGP_129S1SvImJ_P0092847 protein_coding protein_coding MGP_129S1SvImJ_T0092848.1 MGP_129S1SvImJ_G0034952.1 mouse_genomes_project 9 64985361 65000072 + MGP_129S1SvImJ_P0092848 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093350.1 MGP_129S1SvImJ_G0035072.1 mouse_genomes_project 9 79064073 79106967 - MGP_129S1SvImJ_P0093350 Slc17a5 protein_coding protein_coding MGP_129S1SvImJ_T0093351.1 MGP_129S1SvImJ_G0035072.1 mouse_genomes_project 9 79064091 79106941 - MGP_129S1SvImJ_P0093351 Slc17a5 protein_coding protein_coding MGP_129S1SvImJ_T0093352.1 MGP_129S1SvImJ_G0035072.1 mouse_genomes_project 9 79088778 79106953 - MGP_129S1SvImJ_P0093352 Slc17a5 protein_coding protein_coding MGP_129S1SvImJ_T0100170.1 MGP_129S1SvImJ_G0038237.1 mouse_genomes_project 9 44206930 44207035 - Gm22069 snRNA snRNA MGP_129S1SvImJ_T0093253.1 MGP_129S1SvImJ_G0035045.1 mouse_genomes_project 9 76106132 76244345 + MGP_129S1SvImJ_P0093253 Bmp5 protein_coding protein_coding MGP_129S1SvImJ_T0093254.1 MGP_129S1SvImJ_G0035045.1 mouse_genomes_project 9 76162045 76177353 + Bmp5 protein_coding processed_transcript MGP_129S1SvImJ_T0016098.1 MGP_129S1SvImJ_G0014187.1 mouse_genomes_project 9 82850169 82850920 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095231.1 MGP_129S1SvImJ_G0035439.1 mouse_genomes_project 9 123837050 123858464 + MGP_129S1SvImJ_P0095231 Ctnnb1 protein_coding protein_coding MGP_129S1SvImJ_T0095232.1 MGP_129S1SvImJ_G0035439.1 mouse_genomes_project 9 123841221 123868336 + MGP_129S1SvImJ_P0095232 Ctnnb1 protein_coding protein_coding MGP_129S1SvImJ_T0095233.1 MGP_129S1SvImJ_G0035439.1 mouse_genomes_project 9 123841296 123868335 + MGP_129S1SvImJ_P0095233 Ctnnb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095234.1 MGP_129S1SvImJ_G0035439.1 mouse_genomes_project 9 123841307 123864276 + Ctnnb1 protein_coding retained_intron MGP_129S1SvImJ_T0095235.1 MGP_129S1SvImJ_G0035439.1 mouse_genomes_project 9 123841399 123868335 + MGP_129S1SvImJ_P0095235 Ctnnb1 protein_coding protein_coding MGP_129S1SvImJ_T0095236.1 MGP_129S1SvImJ_G0035439.1 mouse_genomes_project 9 123841444 123859539 + MGP_129S1SvImJ_P0095236 Ctnnb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095237.1 MGP_129S1SvImJ_G0035439.1 mouse_genomes_project 9 123841639 123859122 + MGP_129S1SvImJ_P0095237 Ctnnb1 protein_coding protein_coding MGP_129S1SvImJ_T0095238.1 MGP_129S1SvImJ_G0035439.1 mouse_genomes_project 9 123858049 123867346 + MGP_129S1SvImJ_P0095238 Ctnnb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095239.1 MGP_129S1SvImJ_G0035439.1 mouse_genomes_project 9 123858917 123863228 + MGP_129S1SvImJ_P0095239 Ctnnb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095240.1 MGP_129S1SvImJ_G0035439.1 mouse_genomes_project 9 123862953 123863670 + Ctnnb1 protein_coding processed_transcript MGP_129S1SvImJ_T0095241.1 MGP_129S1SvImJ_G0035439.1 mouse_genomes_project 9 123863125 123865468 + Ctnnb1 protein_coding processed_transcript MGP_129S1SvImJ_T0095242.1 MGP_129S1SvImJ_G0035439.1 mouse_genomes_project 9 123863285 123865363 + MGP_129S1SvImJ_P0095242 Ctnnb1 protein_coding protein_coding MGP_129S1SvImJ_T0095243.1 MGP_129S1SvImJ_G0035439.1 mouse_genomes_project 9 123863742 123866854 + MGP_129S1SvImJ_P0095243 Ctnnb1 protein_coding protein_coding MGP_129S1SvImJ_T0095244.1 MGP_129S1SvImJ_G0035439.1 mouse_genomes_project 9 123864695 123865653 + Ctnnb1 protein_coding retained_intron MGP_129S1SvImJ_T0091416.1 MGP_129S1SvImJ_G0034450.1 mouse_genomes_project 9 18526362 18563985 + MGP_129S1SvImJ_P0091416 Slc44a2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091417.1 MGP_129S1SvImJ_G0034450.1 mouse_genomes_project 9 18544931 18563978 + MGP_129S1SvImJ_P0091417 Slc44a2 protein_coding protein_coding MGP_129S1SvImJ_T0009325.1 MGP_129S1SvImJ_G0007493.1 mouse_genomes_project 9 101743280 101745194 - Gm28167 lincRNA lincRNA MGP_129S1SvImJ_T0009224.1 MGP_129S1SvImJ_G0007413.1 mouse_genomes_project 9 28735354 28737213 - Gm17508 lincRNA lincRNA MGP_129S1SvImJ_T0002497.1 MGP_129S1SvImJ_G0002406.1 mouse_genomes_project 9 124711034 124716140 - TEC TEC MGP_129S1SvImJ_T0091493.1 MGP_129S1SvImJ_G0034478.1 mouse_genomes_project 9 19403222 19404403 - MGP_129S1SvImJ_P0091493 Elof1 protein_coding protein_coding MGP_129S1SvImJ_T0091494.1 MGP_129S1SvImJ_G0034478.1 mouse_genomes_project 9 19403223 19407382 - MGP_129S1SvImJ_P0091494 Elof1 protein_coding protein_coding MGP_129S1SvImJ_T0093899.1 MGP_129S1SvImJ_G0035189.1 mouse_genomes_project 9 104294658 104298699 + MGP_129S1SvImJ_P0093899 Amotl2 protein_coding protein_coding MGP_129S1SvImJ_T0093900.1 MGP_129S1SvImJ_G0035189.1 mouse_genomes_project 9 104294788 104311392 + MGP_129S1SvImJ_P0093900 Amotl2 protein_coding protein_coding MGP_129S1SvImJ_T0093901.1 MGP_129S1SvImJ_G0035189.1 mouse_genomes_project 9 104295275 104298711 + MGP_129S1SvImJ_P0093901 Amotl2 protein_coding protein_coding MGP_129S1SvImJ_T0093902.1 MGP_129S1SvImJ_G0035189.1 mouse_genomes_project 9 104295654 104311397 + MGP_129S1SvImJ_P0093902 Amotl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093903.1 MGP_129S1SvImJ_G0035189.1 mouse_genomes_project 9 104295816 104311400 + MGP_129S1SvImJ_P0093903 Amotl2 protein_coding protein_coding MGP_129S1SvImJ_T0093904.1 MGP_129S1SvImJ_G0035189.1 mouse_genomes_project 9 104296415 104298370 + MGP_129S1SvImJ_P0093904 Amotl2 protein_coding protein_coding MGP_129S1SvImJ_T0093905.1 MGP_129S1SvImJ_G0035189.1 mouse_genomes_project 9 104296456 104298378 + MGP_129S1SvImJ_P0093905 Amotl2 protein_coding protein_coding MGP_129S1SvImJ_T0093906.1 MGP_129S1SvImJ_G0035189.1 mouse_genomes_project 9 104296471 104298190 + MGP_129S1SvImJ_P0093906 Amotl2 protein_coding protein_coding MGP_129S1SvImJ_T0093907.1 MGP_129S1SvImJ_G0035189.1 mouse_genomes_project 9 104296554 104306481 + MGP_129S1SvImJ_P0093907 Amotl2 protein_coding protein_coding MGP_129S1SvImJ_T0093908.1 MGP_129S1SvImJ_G0035189.1 mouse_genomes_project 9 104300280 104306304 + Amotl2 protein_coding processed_transcript MGP_129S1SvImJ_T0093909.1 MGP_129S1SvImJ_G0035189.1 mouse_genomes_project 9 104300498 104311397 + Amotl2 protein_coding retained_intron MGP_129S1SvImJ_T0093910.1 MGP_129S1SvImJ_G0035189.1 mouse_genomes_project 9 104306308 104310320 + Amotl2 protein_coding processed_transcript MGP_129S1SvImJ_T0093911.1 MGP_129S1SvImJ_G0035189.1 mouse_genomes_project 9 104308709 104310306 + Amotl2 protein_coding retained_intron MGP_129S1SvImJ_T0093491.1 MGP_129S1SvImJ_G0035096.1 mouse_genomes_project 9 87384133 87401471 - MGP_129S1SvImJ_P0093491 Pgm3 protein_coding protein_coding MGP_129S1SvImJ_T0093492.1 MGP_129S1SvImJ_G0035096.1 mouse_genomes_project 9 87384757 87401472 - MGP_129S1SvImJ_P0093492 Pgm3 protein_coding protein_coding MGP_129S1SvImJ_T0093493.1 MGP_129S1SvImJ_G0035096.1 mouse_genomes_project 9 87385012 87387700 - Pgm3 protein_coding retained_intron MGP_129S1SvImJ_T0093494.1 MGP_129S1SvImJ_G0035096.1 mouse_genomes_project 9 87385437 87401437 - Pgm3 protein_coding retained_intron MGP_129S1SvImJ_T0093495.1 MGP_129S1SvImJ_G0035096.1 mouse_genomes_project 9 87386282 87401486 - Pgm3 protein_coding retained_intron MGP_129S1SvImJ_T0091289.1 MGP_129S1SvImJ_G0034388.1 mouse_genomes_project 9 16303372 16304479 - MGP_129S1SvImJ_P0091289 Olfr843 protein_coding protein_coding MGP_129S1SvImJ_T0092616.1 MGP_129S1SvImJ_G0034891.1 mouse_genomes_project 9 57783716 57795911 + MGP_129S1SvImJ_P0092616 6030419C18Rik protein_coding protein_coding MGP_129S1SvImJ_T0094187.1 MGP_129S1SvImJ_G0035245.1 mouse_genomes_project 9 108682558 108742121 - MGP_129S1SvImJ_P0094187 Manf protein_coding protein_coding MGP_129S1SvImJ_T0094189.1 MGP_129S1SvImJ_G0035245.1 mouse_genomes_project 9 108719055 108740533 - MGP_129S1SvImJ_P0094189 Manf protein_coding protein_coding MGP_129S1SvImJ_T0094193.1 MGP_129S1SvImJ_G0035245.1 mouse_genomes_project 9 108737665 108742228 - MGP_129S1SvImJ_P0094193 Manf protein_coding protein_coding MGP_129S1SvImJ_T0094194.1 MGP_129S1SvImJ_G0035245.1 mouse_genomes_project 9 108739003 108741664 - MGP_129S1SvImJ_P0094194 Manf protein_coding protein_coding MGP_129S1SvImJ_T0094195.1 MGP_129S1SvImJ_G0035245.1 mouse_genomes_project 9 108739334 108742119 - MGP_129S1SvImJ_P0094195 Manf protein_coding protein_coding MGP_129S1SvImJ_T0094196.1 MGP_129S1SvImJ_G0035245.1 mouse_genomes_project 9 108740280 108742164 - Manf protein_coding retained_intron MGP_129S1SvImJ_T0094197.1 MGP_129S1SvImJ_G0035245.1 mouse_genomes_project 9 108740812 108742166 - Manf protein_coding retained_intron MGP_129S1SvImJ_T0092014.1 MGP_129S1SvImJ_G0034697.1 mouse_genomes_project 9 42725980 42744444 - MGP_129S1SvImJ_P0092014 Nlrx1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0094191.1 MGP_129S1SvImJ_G0035246.1 mouse_genomes_project 9 108731144 108737679 - MGP_129S1SvImJ_P0094191 Rbm15b protein_coding protein_coding MGP_129S1SvImJ_T0094192.1 MGP_129S1SvImJ_G0035246.1 mouse_genomes_project 9 108734973 108735842 - MGP_129S1SvImJ_P0094192 Rbm15b protein_coding protein_coding MGP_129S1SvImJ_T0091751.1 MGP_129S1SvImJ_G0034558.1 mouse_genomes_project 9 34822657 35029851 - MGP_129S1SvImJ_P0091751 Pknox2 protein_coding protein_coding MGP_129S1SvImJ_T0091752.1 MGP_129S1SvImJ_G0034558.1 mouse_genomes_project 9 34822657 35029818 - MGP_129S1SvImJ_P0091752 Pknox2 protein_coding protein_coding MGP_129S1SvImJ_T0091753.1 MGP_129S1SvImJ_G0034558.1 mouse_genomes_project 9 34822660 35029818 - MGP_129S1SvImJ_P0091753 Pknox2 protein_coding protein_coding MGP_129S1SvImJ_T0091754.1 MGP_129S1SvImJ_G0034558.1 mouse_genomes_project 9 34824153 34906299 - MGP_129S1SvImJ_P0091754 Pknox2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091755.1 MGP_129S1SvImJ_G0034558.1 mouse_genomes_project 9 34824317 35029821 - Pknox2 protein_coding processed_transcript MGP_129S1SvImJ_T0091756.1 MGP_129S1SvImJ_G0034558.1 mouse_genomes_project 9 34855230 35029821 - Pknox2 protein_coding retained_intron MGP_129S1SvImJ_T0091757.1 MGP_129S1SvImJ_G0034558.1 mouse_genomes_project 9 34867511 35029821 - Pknox2 protein_coding retained_intron MGP_129S1SvImJ_T0091758.1 MGP_129S1SvImJ_G0034558.1 mouse_genomes_project 9 34869283 35029821 - MGP_129S1SvImJ_P0091758 Pknox2 protein_coding protein_coding MGP_129S1SvImJ_T0091759.1 MGP_129S1SvImJ_G0034558.1 mouse_genomes_project 9 34869296 35089937 - MGP_129S1SvImJ_P0091759 Pknox2 protein_coding protein_coding MGP_129S1SvImJ_T0091760.1 MGP_129S1SvImJ_G0034558.1 mouse_genomes_project 9 34869312 35029818 - MGP_129S1SvImJ_P0091760 Pknox2 protein_coding protein_coding MGP_129S1SvImJ_T0091761.1 MGP_129S1SvImJ_G0034558.1 mouse_genomes_project 9 34888792 35099582 - MGP_129S1SvImJ_P0091761 Pknox2 protein_coding protein_coding MGP_129S1SvImJ_T0091762.1 MGP_129S1SvImJ_G0034558.1 mouse_genomes_project 9 34928650 35089934 - Pknox2 protein_coding processed_transcript MGP_129S1SvImJ_T0018562.1 MGP_129S1SvImJ_G0015737.1 mouse_genomes_project 9 42561235 42562895 - Gm20444 processed_transcript processed_transcript MGP_129S1SvImJ_T0091897.1 MGP_129S1SvImJ_G0034658.1 mouse_genomes_project 9 38190082 38191079 + MGP_129S1SvImJ_P0091897 Olfr981 protein_coding protein_coding MGP_129S1SvImJ_T0092684.1 MGP_129S1SvImJ_G0034909.1 mouse_genomes_project 9 59357826 59912718 - MGP_129S1SvImJ_P0092684 Thsd4 protein_coding protein_coding MGP_129S1SvImJ_T0092685.1 MGP_129S1SvImJ_G0034909.1 mouse_genomes_project 9 59357826 59926806 - MGP_129S1SvImJ_P0092685 Thsd4 protein_coding protein_coding MGP_129S1SvImJ_T0092686.1 MGP_129S1SvImJ_G0034909.1 mouse_genomes_project 9 59360624 59535549 - MGP_129S1SvImJ_P0092686 Thsd4 protein_coding protein_coding MGP_129S1SvImJ_T0092687.1 MGP_129S1SvImJ_G0034909.1 mouse_genomes_project 9 59385106 59393651 - Thsd4 protein_coding retained_intron MGP_129S1SvImJ_T0092688.1 MGP_129S1SvImJ_G0034909.1 mouse_genomes_project 9 59838095 59939837 - MGP_129S1SvImJ_P0092688 Thsd4 protein_coding protein_coding MGP_129S1SvImJ_T0092689.1 MGP_129S1SvImJ_G0034909.1 mouse_genomes_project 9 59925645 59926778 - Thsd4 protein_coding processed_transcript MGP_129S1SvImJ_T0098765.1 MGP_129S1SvImJ_G0036850.1 mouse_genomes_project 9 63963750 63963885 + Gm24289 scaRNA scaRNA MGP_129S1SvImJ_T0100201.1 MGP_129S1SvImJ_G0038268.1 mouse_genomes_project 9 87545057 87545171 - Gm25949 snRNA snRNA MGP_129S1SvImJ_T0094395.1 MGP_129S1SvImJ_G0035272.1 mouse_genomes_project 9 109820517 109834033 + MGP_129S1SvImJ_P0094395 Mst1r protein_coding protein_coding MGP_129S1SvImJ_T0094396.1 MGP_129S1SvImJ_G0035272.1 mouse_genomes_project 9 109820551 109834031 + MGP_129S1SvImJ_P0094396 Mst1r protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094397.1 MGP_129S1SvImJ_G0035272.1 mouse_genomes_project 9 109828652 109829378 + Mst1r protein_coding retained_intron MGP_129S1SvImJ_T0094398.1 MGP_129S1SvImJ_G0035272.1 mouse_genomes_project 9 109829873 109830554 + Mst1r protein_coding retained_intron MGP_129S1SvImJ_T0101473.1 MGP_129S1SvImJ_G0039540.1 mouse_genomes_project 9 78478603 78478730 - Gm23609 snoRNA snoRNA MGP_129S1SvImJ_T0101483.1 MGP_129S1SvImJ_G0039550.1 mouse_genomes_project 9 93586046 93586177 - Gm25417 snoRNA snoRNA MGP_129S1SvImJ_T0009284.1 MGP_129S1SvImJ_G0007461.1 mouse_genomes_project 9 77455079 77460353 + Gm19541 lincRNA lincRNA MGP_129S1SvImJ_T0091764.1 MGP_129S1SvImJ_G0034560.1 mouse_genomes_project 9 35193148 35221237 - MGP_129S1SvImJ_P0091764 Slc37a2 protein_coding protein_coding MGP_129S1SvImJ_T0091765.1 MGP_129S1SvImJ_G0034560.1 mouse_genomes_project 9 35194315 35220913 - MGP_129S1SvImJ_P0091765 Slc37a2 protein_coding protein_coding MGP_129S1SvImJ_T0091766.1 MGP_129S1SvImJ_G0034560.1 mouse_genomes_project 9 35194511 35199154 - Slc37a2 protein_coding retained_intron MGP_129S1SvImJ_T0018548.1 MGP_129S1SvImJ_G0015736.1 mouse_genomes_project 9 39646628 39888920 + processed_transcript lincRNA MGP_129S1SvImJ_T0018549.1 MGP_129S1SvImJ_G0015736.1 mouse_genomes_project 9 39646757 39776957 + processed_transcript lincRNA MGP_129S1SvImJ_T0018550.1 MGP_129S1SvImJ_G0015736.1 mouse_genomes_project 9 39646792 39715751 + processed_transcript lincRNA MGP_129S1SvImJ_T0018551.1 MGP_129S1SvImJ_G0015736.1 mouse_genomes_project 9 39763328 39889377 + processed_transcript lincRNA MGP_129S1SvImJ_T0018552.1 MGP_129S1SvImJ_G0015736.1 mouse_genomes_project 9 39763436 39914014 + processed_transcript lincRNA MGP_129S1SvImJ_T0018553.1 MGP_129S1SvImJ_G0015736.1 mouse_genomes_project 9 39878564 39891729 + processed_transcript lincRNA MGP_129S1SvImJ_T0018554.1 MGP_129S1SvImJ_G0015736.1 mouse_genomes_project 9 39879045 39891732 + processed_transcript lincRNA MGP_129S1SvImJ_T0018555.1 MGP_129S1SvImJ_G0015736.1 mouse_genomes_project 9 39879773 39891730 + processed_transcript processed_transcript MGP_129S1SvImJ_T0018556.1 MGP_129S1SvImJ_G0015736.1 mouse_genomes_project 9 39880284 39911594 + processed_transcript lincRNA MGP_129S1SvImJ_T0018557.1 MGP_129S1SvImJ_G0015736.1 mouse_genomes_project 9 39880298 39913818 + processed_transcript lincRNA MGP_129S1SvImJ_T0018558.1 MGP_129S1SvImJ_G0015736.1 mouse_genomes_project 9 39880370 39891389 + processed_transcript lincRNA MGP_129S1SvImJ_T0018559.1 MGP_129S1SvImJ_G0015736.1 mouse_genomes_project 9 39887396 39891640 + processed_transcript retained_intron MGP_129S1SvImJ_T0018560.1 MGP_129S1SvImJ_G0015736.1 mouse_genomes_project 9 39899321 39911560 + processed_transcript lincRNA MGP_129S1SvImJ_T0018561.1 MGP_129S1SvImJ_G0015736.1 mouse_genomes_project 9 39913065 39916599 + processed_transcript retained_intron MGP_129S1SvImJ_T0093572.1 MGP_129S1SvImJ_G0035119.1 mouse_genomes_project 9 90980429 90997401 + MGP_129S1SvImJ_P0093572 Ctsh protein_coding protein_coding MGP_129S1SvImJ_T0093573.1 MGP_129S1SvImJ_G0035119.1 mouse_genomes_project 9 90980544 91008898 + MGP_129S1SvImJ_P0093573 Ctsh protein_coding protein_coding MGP_129S1SvImJ_T0093574.1 MGP_129S1SvImJ_G0035119.1 mouse_genomes_project 9 90980783 91008896 + Ctsh protein_coding retained_intron MGP_129S1SvImJ_T0093575.1 MGP_129S1SvImJ_G0035119.1 mouse_genomes_project 9 90980798 90981620 + Ctsh protein_coding retained_intron MGP_129S1SvImJ_T0093576.1 MGP_129S1SvImJ_G0035119.1 mouse_genomes_project 9 90980814 90996218 + MGP_129S1SvImJ_P0093576 Ctsh protein_coding protein_coding MGP_129S1SvImJ_T0093577.1 MGP_129S1SvImJ_G0035119.1 mouse_genomes_project 9 90980815 91008896 + MGP_129S1SvImJ_P0093577 Ctsh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093578.1 MGP_129S1SvImJ_G0035119.1 mouse_genomes_project 9 90980831 90999321 + Ctsh protein_coding retained_intron MGP_129S1SvImJ_T0093579.1 MGP_129S1SvImJ_G0035119.1 mouse_genomes_project 9 90980836 91008550 + MGP_129S1SvImJ_P0093579 Ctsh protein_coding protein_coding MGP_129S1SvImJ_T0093580.1 MGP_129S1SvImJ_G0035119.1 mouse_genomes_project 9 90992107 90993577 + Ctsh protein_coding retained_intron MGP_129S1SvImJ_T0093581.1 MGP_129S1SvImJ_G0035119.1 mouse_genomes_project 9 90994503 91003862 + Ctsh protein_coding retained_intron MGP_129S1SvImJ_T0093582.1 MGP_129S1SvImJ_G0035119.1 mouse_genomes_project 9 91003672 91008558 + Ctsh protein_coding retained_intron MGP_129S1SvImJ_T0093863.1 MGP_129S1SvImJ_G0035180.1 mouse_genomes_project 9 102451406 102506626 - MGP_129S1SvImJ_P0093863 Pccb protein_coding protein_coding MGP_129S1SvImJ_T0093864.1 MGP_129S1SvImJ_G0035180.1 mouse_genomes_project 9 102451406 102506605 - MGP_129S1SvImJ_P0093864 Pccb protein_coding protein_coding MGP_129S1SvImJ_T0093865.1 MGP_129S1SvImJ_G0035180.1 mouse_genomes_project 9 102453747 102454984 - Pccb protein_coding retained_intron MGP_129S1SvImJ_T0093866.1 MGP_129S1SvImJ_G0035180.1 mouse_genomes_project 9 102464965 102506594 - MGP_129S1SvImJ_P0093866 Pccb protein_coding protein_coding MGP_129S1SvImJ_T0093867.1 MGP_129S1SvImJ_G0035180.1 mouse_genomes_project 9 102481118 102506547 - Pccb protein_coding processed_transcript MGP_129S1SvImJ_T0093868.1 MGP_129S1SvImJ_G0035180.1 mouse_genomes_project 9 102493195 102506609 - MGP_129S1SvImJ_P0093868 Pccb protein_coding protein_coding MGP_129S1SvImJ_T0100214.1 MGP_129S1SvImJ_G0038281.1 mouse_genomes_project 9 108946784 108946891 + Gm22454 snRNA snRNA MGP_129S1SvImJ_T0005572.1 MGP_129S1SvImJ_G0004703.1 mouse_genomes_project 9 117241674 117243833 + Gm9888 antisense antisense MGP_129S1SvImJ_T0018584.1 MGP_129S1SvImJ_G0015746.1 mouse_genomes_project 9 77985384 77986893 + Gm19569 processed_transcript lincRNA MGP_129S1SvImJ_T0018585.1 MGP_129S1SvImJ_G0015746.1 mouse_genomes_project 9 77985627 77986893 + Gm19569 processed_transcript retained_intron MGP_129S1SvImJ_T0093453.1 MGP_129S1SvImJ_G0035090.1 mouse_genomes_project 9 84625207 84817186 + MGP_129S1SvImJ_P0093453 Bckdhb protein_coding protein_coding MGP_129S1SvImJ_T0093454.1 MGP_129S1SvImJ_G0035090.1 mouse_genomes_project 9 84625232 84758295 + MGP_129S1SvImJ_P0093454 Bckdhb protein_coding protein_coding MGP_129S1SvImJ_T0093455.1 MGP_129S1SvImJ_G0035090.1 mouse_genomes_project 9 84643365 84817187 + MGP_129S1SvImJ_P0093455 Bckdhb protein_coding protein_coding MGP_129S1SvImJ_T0093456.1 MGP_129S1SvImJ_G0035090.1 mouse_genomes_project 9 84725024 84817145 + Bckdhb protein_coding processed_transcript MGP_129S1SvImJ_T0093457.1 MGP_129S1SvImJ_G0035090.1 mouse_genomes_project 9 84735515 84817186 + Bckdhb protein_coding processed_transcript MGP_129S1SvImJ_T0093458.1 MGP_129S1SvImJ_G0035090.1 mouse_genomes_project 9 84799399 84817187 + Bckdhb protein_coding processed_transcript MGP_129S1SvImJ_T0091934.1 MGP_129S1SvImJ_G0034673.1 mouse_genomes_project 9 39225009 39236671 - MGP_129S1SvImJ_P0091934 Crtam protein_coding protein_coding MGP_129S1SvImJ_T0091935.1 MGP_129S1SvImJ_G0034673.1 mouse_genomes_project 9 39225052 39256369 - MGP_129S1SvImJ_P0091935 Crtam protein_coding protein_coding MGP_129S1SvImJ_T0091936.1 MGP_129S1SvImJ_G0034673.1 mouse_genomes_project 9 39225054 39256369 - MGP_129S1SvImJ_P0091936 Crtam protein_coding protein_coding MGP_129S1SvImJ_T0091937.1 MGP_129S1SvImJ_G0034673.1 mouse_genomes_project 9 39225055 39256411 - MGP_129S1SvImJ_P0091937 Crtam protein_coding protein_coding MGP_129S1SvImJ_T0095356.1 MGP_129S1SvImJ_G0035476.1 mouse_genomes_project 9 126404922 126508878 + MGP_129S1SvImJ_P0095356 Lars2 protein_coding protein_coding MGP_129S1SvImJ_T0094342.1 MGP_129S1SvImJ_G0035268.1 mouse_genomes_project 9 109574500 109605255 - MGP_129S1SvImJ_P0094342 Sema3f protein_coding protein_coding MGP_129S1SvImJ_T0094343.1 MGP_129S1SvImJ_G0035268.1 mouse_genomes_project 9 109575419 109600337 - MGP_129S1SvImJ_P0094343 Sema3f protein_coding protein_coding MGP_129S1SvImJ_T0094344.1 MGP_129S1SvImJ_G0035268.1 mouse_genomes_project 9 109576123 109577764 - Sema3f protein_coding retained_intron MGP_129S1SvImJ_T0094345.1 MGP_129S1SvImJ_G0035268.1 mouse_genomes_project 9 109576123 109604799 - MGP_129S1SvImJ_P0094345 Sema3f protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094346.1 MGP_129S1SvImJ_G0035268.1 mouse_genomes_project 9 109576993 109580248 - MGP_129S1SvImJ_P0094346 Sema3f protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094347.1 MGP_129S1SvImJ_G0035268.1 mouse_genomes_project 9 109577009 109577800 - Sema3f protein_coding retained_intron MGP_129S1SvImJ_T0094348.1 MGP_129S1SvImJ_G0035268.1 mouse_genomes_project 9 109577132 109577774 - Sema3f protein_coding retained_intron MGP_129S1SvImJ_T0094349.1 MGP_129S1SvImJ_G0035268.1 mouse_genomes_project 9 109580205 109585657 - Sema3f protein_coding processed_transcript MGP_129S1SvImJ_T0094350.1 MGP_129S1SvImJ_G0035268.1 mouse_genomes_project 9 109580672 109585585 - MGP_129S1SvImJ_P0094350 Sema3f protein_coding protein_coding MGP_129S1SvImJ_T0094351.1 MGP_129S1SvImJ_G0035268.1 mouse_genomes_project 9 109580686 109582862 - Sema3f protein_coding retained_intron MGP_129S1SvImJ_T0094352.1 MGP_129S1SvImJ_G0035268.1 mouse_genomes_project 9 109581256 109604260 - MGP_129S1SvImJ_P0094352 Sema3f protein_coding protein_coding MGP_129S1SvImJ_T0094353.1 MGP_129S1SvImJ_G0035268.1 mouse_genomes_project 9 109582630 109585646 - MGP_129S1SvImJ_P0094353 Sema3f protein_coding protein_coding MGP_129S1SvImJ_T0092420.1 MGP_129S1SvImJ_G0034830.1 mouse_genomes_project 9 53826755 53835254 + MGP_129S1SvImJ_P0092420 Crabp1 protein_coding protein_coding MGP_129S1SvImJ_T0018612.1 MGP_129S1SvImJ_G0015758.1 mouse_genomes_project 9 105050307 105086842 + 5830418P13Rik processed_transcript antisense MGP_129S1SvImJ_T0018613.1 MGP_129S1SvImJ_G0015758.1 mouse_genomes_project 9 105051842 105052983 + 5830418P13Rik processed_transcript retained_intron MGP_129S1SvImJ_T0018614.1 MGP_129S1SvImJ_G0015758.1 mouse_genomes_project 9 105051866 105054496 + 5830418P13Rik processed_transcript antisense MGP_129S1SvImJ_T0009331.1 MGP_129S1SvImJ_G0007499.1 mouse_genomes_project 9 104349366 104349626 - Gm28621 lincRNA lincRNA MGP_129S1SvImJ_T0005442.1 MGP_129S1SvImJ_G0004610.1 mouse_genomes_project 9 21640292 21644411 - Gm15600 antisense antisense MGP_129S1SvImJ_T0016102.1 MGP_129S1SvImJ_G0014191.1 mouse_genomes_project 9 84168516 84168922 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005433.1 MGP_129S1SvImJ_G0004606.1 mouse_genomes_project 9 11656716 11672406 + Gm10706 antisense antisense MGP_129S1SvImJ_T0094964.1 MGP_129S1SvImJ_G0035366.1 mouse_genomes_project 9 113150970 113168252 + MGP_129S1SvImJ_P0094964 Lrrc2 protein_coding protein_coding MGP_129S1SvImJ_T0094965.1 MGP_129S1SvImJ_G0035366.1 mouse_genomes_project 9 113151000 113177042 + MGP_129S1SvImJ_P0094965 Lrrc2 protein_coding protein_coding MGP_129S1SvImJ_T0094966.1 MGP_129S1SvImJ_G0035366.1 mouse_genomes_project 9 113158057 113173972 + MGP_129S1SvImJ_P0094966 Lrrc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093370.1 MGP_129S1SvImJ_G0035078.1 mouse_genomes_project 9 80631578 80660684 + Senp6 protein_coding retained_intron MGP_129S1SvImJ_T0093371.1 MGP_129S1SvImJ_G0035078.1 mouse_genomes_project 9 80631578 80712734 + MGP_129S1SvImJ_P0093371 Senp6 protein_coding protein_coding MGP_129S1SvImJ_T0093372.1 MGP_129S1SvImJ_G0035078.1 mouse_genomes_project 9 80631611 80681594 + MGP_129S1SvImJ_P0093372 Senp6 protein_coding protein_coding MGP_129S1SvImJ_T0093373.1 MGP_129S1SvImJ_G0035078.1 mouse_genomes_project 9 80631774 80712562 + MGP_129S1SvImJ_P0093373 Senp6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093374.1 MGP_129S1SvImJ_G0035078.1 mouse_genomes_project 9 80632199 80711643 + MGP_129S1SvImJ_P0093374 Senp6 protein_coding protein_coding MGP_129S1SvImJ_T0093375.1 MGP_129S1SvImJ_G0035078.1 mouse_genomes_project 9 80632492 80653724 + Senp6 protein_coding processed_transcript MGP_129S1SvImJ_T0093376.1 MGP_129S1SvImJ_G0035078.1 mouse_genomes_project 9 80658509 80689963 + MGP_129S1SvImJ_P0093376 Senp6 protein_coding protein_coding MGP_129S1SvImJ_T0093377.1 MGP_129S1SvImJ_G0035078.1 mouse_genomes_project 9 80669392 80711493 + MGP_129S1SvImJ_P0093377 Senp6 protein_coding protein_coding MGP_129S1SvImJ_T0093378.1 MGP_129S1SvImJ_G0035078.1 mouse_genomes_project 9 80681862 80686587 + MGP_129S1SvImJ_P0093378 Senp6 protein_coding protein_coding MGP_129S1SvImJ_T0093379.1 MGP_129S1SvImJ_G0035078.1 mouse_genomes_project 9 80681879 80690035 + Senp6 protein_coding processed_transcript MGP_129S1SvImJ_T0093380.1 MGP_129S1SvImJ_G0035078.1 mouse_genomes_project 9 80691779 80704394 + MGP_129S1SvImJ_P0093380 Senp6 protein_coding protein_coding MGP_129S1SvImJ_T0093381.1 MGP_129S1SvImJ_G0035078.1 mouse_genomes_project 9 80704194 80711952 + Senp6 protein_coding retained_intron MGP_129S1SvImJ_T0093382.1 MGP_129S1SvImJ_G0035078.1 mouse_genomes_project 9 80706856 80711490 + Senp6 protein_coding retained_intron MGP_129S1SvImJ_T0093383.1 MGP_129S1SvImJ_G0035078.1 mouse_genomes_project 9 80709825 80711786 + Senp6 protein_coding retained_intron MGP_129S1SvImJ_T0018619.1 MGP_129S1SvImJ_G0015761.1 mouse_genomes_project 9 110814939 110816100 - Gm35025 processed_transcript lincRNA MGP_129S1SvImJ_T0018620.1 MGP_129S1SvImJ_G0015761.1 mouse_genomes_project 9 110815071 110815821 - Gm35025 processed_transcript lincRNA MGP_129S1SvImJ_T0018621.1 MGP_129S1SvImJ_G0015761.1 mouse_genomes_project 9 110815168 110815863 - Gm35025 processed_transcript TEC MGP_129S1SvImJ_T0094777.1 MGP_129S1SvImJ_G0035334.1 mouse_genomes_project 9 111596741 111681640 - MGP_129S1SvImJ_P0094777 protein_coding protein_coding MGP_129S1SvImJ_T0093929.1 MGP_129S1SvImJ_G0035196.1 mouse_genomes_project 9 104816642 104842808 - MGP_129S1SvImJ_P0093929 Trf protein_coding protein_coding MGP_129S1SvImJ_T0093930.1 MGP_129S1SvImJ_G0035196.1 mouse_genomes_project 9 104821335 104842979 - MGP_129S1SvImJ_P0093930 Trf protein_coding protein_coding MGP_129S1SvImJ_T0093931.1 MGP_129S1SvImJ_G0035196.1 mouse_genomes_project 9 104821565 104824518 - Trf protein_coding retained_intron MGP_129S1SvImJ_T0093932.1 MGP_129S1SvImJ_G0035196.1 mouse_genomes_project 9 104823079 104832428 - MGP_129S1SvImJ_P0093932 Trf protein_coding protein_coding MGP_129S1SvImJ_T0093933.1 MGP_129S1SvImJ_G0035196.1 mouse_genomes_project 9 104823147 104834633 - MGP_129S1SvImJ_P0093933 Trf protein_coding protein_coding MGP_129S1SvImJ_T0093934.1 MGP_129S1SvImJ_G0035196.1 mouse_genomes_project 9 104828351 104842805 - MGP_129S1SvImJ_P0093934 Trf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093935.1 MGP_129S1SvImJ_G0035196.1 mouse_genomes_project 9 104833456 104835245 - Trf protein_coding retained_intron MGP_129S1SvImJ_T0093936.1 MGP_129S1SvImJ_G0035196.1 mouse_genomes_project 9 104834666 104842801 - MGP_129S1SvImJ_P0093936 Trf protein_coding protein_coding MGP_129S1SvImJ_T0093937.1 MGP_129S1SvImJ_G0035196.1 mouse_genomes_project 9 104835654 104841030 - MGP_129S1SvImJ_P0093937 Trf protein_coding protein_coding MGP_129S1SvImJ_T0091488.1 MGP_129S1SvImJ_G0034476.1 mouse_genomes_project 9 19359130 19373515 - MGP_129S1SvImJ_P0091488 Ecsit protein_coding protein_coding MGP_129S1SvImJ_T0091489.1 MGP_129S1SvImJ_G0034476.1 mouse_genomes_project 9 19359130 19373526 - MGP_129S1SvImJ_P0091489 Ecsit protein_coding protein_coding MGP_129S1SvImJ_T0091490.1 MGP_129S1SvImJ_G0034476.1 mouse_genomes_project 9 19359130 19373490 - MGP_129S1SvImJ_P0091490 Ecsit protein_coding protein_coding MGP_129S1SvImJ_T0091491.1 MGP_129S1SvImJ_G0034476.1 mouse_genomes_project 9 19360363 19373515 - MGP_129S1SvImJ_P0091491 Ecsit protein_coding protein_coding MGP_129S1SvImJ_T0094857.1 MGP_129S1SvImJ_G0035343.1 mouse_genomes_project 9 112382167 112398193 + MGP_129S1SvImJ_P0094857 Cspg5 protein_coding protein_coding MGP_129S1SvImJ_T0094858.1 MGP_129S1SvImJ_G0035343.1 mouse_genomes_project 9 112382167 112398194 + MGP_129S1SvImJ_P0094858 Cspg5 protein_coding protein_coding MGP_129S1SvImJ_T0094859.1 MGP_129S1SvImJ_G0035343.1 mouse_genomes_project 9 112383867 112385990 + Cspg5 protein_coding retained_intron MGP_129S1SvImJ_T0094860.1 MGP_129S1SvImJ_G0035343.1 mouse_genomes_project 9 112383915 112398181 + MGP_129S1SvImJ_P0094860 Cspg5 protein_coding protein_coding MGP_129S1SvImJ_T0094861.1 MGP_129S1SvImJ_G0035343.1 mouse_genomes_project 9 112384449 112398193 + MGP_129S1SvImJ_P0094861 Cspg5 protein_coding protein_coding MGP_129S1SvImJ_T0093055.1 MGP_129S1SvImJ_G0035006.1 mouse_genomes_project 9 71227940 71279081 - MGP_129S1SvImJ_P0093055 Aqp9 protein_coding protein_coding MGP_129S1SvImJ_T0093056.1 MGP_129S1SvImJ_G0035006.1 mouse_genomes_project 9 71227942 71279052 - MGP_129S1SvImJ_P0093056 Aqp9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093057.1 MGP_129S1SvImJ_G0035006.1 mouse_genomes_project 9 71227943 71278426 - MGP_129S1SvImJ_P0093057 Aqp9 protein_coding protein_coding MGP_129S1SvImJ_T0093058.1 MGP_129S1SvImJ_G0035006.1 mouse_genomes_project 9 71229129 71284494 - MGP_129S1SvImJ_P0093058 Aqp9 protein_coding protein_coding MGP_129S1SvImJ_T0093059.1 MGP_129S1SvImJ_G0035006.1 mouse_genomes_project 9 71278765 71281052 - Aqp9 protein_coding processed_transcript MGP_129S1SvImJ_T0093060.1 MGP_129S1SvImJ_G0035006.1 mouse_genomes_project 9 71278821 71283731 - Aqp9 protein_coding processed_transcript MGP_129S1SvImJ_T0093061.1 MGP_129S1SvImJ_G0035006.1 mouse_genomes_project 9 71279266 71284519 - Aqp9 protein_coding processed_transcript MGP_129S1SvImJ_T0093062.1 MGP_129S1SvImJ_G0035006.1 mouse_genomes_project 9 71279266 71283471 - Aqp9 protein_coding processed_transcript MGP_129S1SvImJ_T0093063.1 MGP_129S1SvImJ_G0035006.1 mouse_genomes_project 9 71279267 71284514 - Aqp9 protein_coding processed_transcript MGP_129S1SvImJ_T0093064.1 MGP_129S1SvImJ_G0035006.1 mouse_genomes_project 9 71280966 71283687 - Aqp9 protein_coding processed_transcript MGP_129S1SvImJ_T0093251.1 MGP_129S1SvImJ_G0035043.1 mouse_genomes_project 9 75953487 75965478 + MGP_129S1SvImJ_P0093251 Lysmd2 protein_coding protein_coding MGP_129S1SvImJ_T0093192.1 MGP_129S1SvImJ_G0035028.1 mouse_genomes_project 9 73331473 73343532 + MGP_129S1SvImJ_P0093192 Rsl24d1 protein_coding protein_coding MGP_129S1SvImJ_T0093193.1 MGP_129S1SvImJ_G0035028.1 mouse_genomes_project 9 73331495 73344153 + MGP_129S1SvImJ_P0093193 Rsl24d1 protein_coding protein_coding MGP_129S1SvImJ_T0093194.1 MGP_129S1SvImJ_G0035028.1 mouse_genomes_project 9 73331550 73343389 + MGP_129S1SvImJ_P0093194 Rsl24d1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093195.1 MGP_129S1SvImJ_G0035028.1 mouse_genomes_project 9 73332643 73343202 + MGP_129S1SvImJ_P0093195 Rsl24d1 protein_coding protein_coding MGP_129S1SvImJ_T0099052.1 MGP_129S1SvImJ_G0037119.1 mouse_genomes_project 9 126823816 126841776 - Gm17021 sense_overlapping sense_overlapping MGP_129S1SvImJ_T0092204.1 MGP_129S1SvImJ_G0034755.1 mouse_genomes_project 9 45701223 45706337 + MGP_129S1SvImJ_P0092204 Gm4791 protein_coding protein_coding MGP_129S1SvImJ_T0101471.1 MGP_129S1SvImJ_G0039538.1 mouse_genomes_project 9 75038396 75038539 + Gm22315 snoRNA snoRNA MGP_129S1SvImJ_T0100179.1 MGP_129S1SvImJ_G0038246.1 mouse_genomes_project 9 62722374 62722481 + Gm25064 snRNA snRNA MGP_129S1SvImJ_T0100168.1 MGP_129S1SvImJ_G0038235.1 mouse_genomes_project 9 42972212 42972327 - Gm22540 snRNA snRNA MGP_129S1SvImJ_T0092339.1 MGP_129S1SvImJ_G0034797.1 mouse_genomes_project 9 50033613 50037310 + MGP_129S1SvImJ_P0092339 Btg4 protein_coding protein_coding MGP_129S1SvImJ_T0091573.1 MGP_129S1SvImJ_G0034510.1 mouse_genomes_project 9 25295683 25296427 + Opcml protein_coding processed_transcript MGP_129S1SvImJ_T0091574.1 MGP_129S1SvImJ_G0034510.1 mouse_genomes_project 9 25295855 26478781 + MGP_129S1SvImJ_P0091574 Opcml protein_coding protein_coding MGP_129S1SvImJ_T0091575.1 MGP_129S1SvImJ_G0034510.1 mouse_genomes_project 9 25296210 25541766 + Opcml protein_coding processed_transcript MGP_129S1SvImJ_T0091576.1 MGP_129S1SvImJ_G0034510.1 mouse_genomes_project 9 25924164 25926967 + Opcml protein_coding processed_transcript MGP_129S1SvImJ_T0091577.1 MGP_129S1SvImJ_G0034510.1 mouse_genomes_project 9 25924812 26474429 + MGP_129S1SvImJ_P0091577 Opcml protein_coding protein_coding MGP_129S1SvImJ_T0091578.1 MGP_129S1SvImJ_G0034510.1 mouse_genomes_project 9 25925098 26361186 + Opcml protein_coding retained_intron MGP_129S1SvImJ_T0091579.1 MGP_129S1SvImJ_G0034510.1 mouse_genomes_project 9 25925184 26179123 + Opcml protein_coding processed_transcript MGP_129S1SvImJ_T0091580.1 MGP_129S1SvImJ_G0034510.1 mouse_genomes_project 9 26192072 26205678 + Opcml protein_coding processed_transcript MGP_129S1SvImJ_T0091770.1 MGP_129S1SvImJ_G0034562.1 mouse_genomes_project 9 35341807 35362321 + MGP_129S1SvImJ_P0091770 Hepacam protein_coding protein_coding MGP_129S1SvImJ_T0000374.1 MGP_129S1SvImJ_G0000316.1 mouse_genomes_project 9 126129754 126129821 - mt-Tw Mt_tRNA Mt_tRNA MGP_129S1SvImJ_T0009267.1 MGP_129S1SvImJ_G0007448.1 mouse_genomes_project 9 67671479 67672976 - M5C1000I18Rik lincRNA lincRNA MGP_129S1SvImJ_T0009268.1 MGP_129S1SvImJ_G0007448.1 mouse_genomes_project 9 67671480 67672998 - M5C1000I18Rik lincRNA lincRNA MGP_129S1SvImJ_T0009269.1 MGP_129S1SvImJ_G0007448.1 mouse_genomes_project 9 67671480 67672976 - M5C1000I18Rik lincRNA lincRNA MGP_129S1SvImJ_T0095337.1 MGP_129S1SvImJ_G0035471.1 mouse_genomes_project 9 126084033 126135461 - MGP_129S1SvImJ_P0095337 Zdhhc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095338.1 MGP_129S1SvImJ_G0035471.1 mouse_genomes_project 9 126092192 126135519 - MGP_129S1SvImJ_P0095338 Zdhhc3 protein_coding protein_coding MGP_129S1SvImJ_T0095339.1 MGP_129S1SvImJ_G0035471.1 mouse_genomes_project 9 126094878 126135494 - MGP_129S1SvImJ_P0095339 Zdhhc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095340.1 MGP_129S1SvImJ_G0035471.1 mouse_genomes_project 9 126095546 126135480 - MGP_129S1SvImJ_P0095340 Zdhhc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095341.1 MGP_129S1SvImJ_G0035471.1 mouse_genomes_project 9 126096086 126135492 - MGP_129S1SvImJ_P0095341 Zdhhc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095342.1 MGP_129S1SvImJ_G0035471.1 mouse_genomes_project 9 126096346 126122673 - MGP_129S1SvImJ_P0095342 Zdhhc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095343.1 MGP_129S1SvImJ_G0035471.1 mouse_genomes_project 9 126098404 126135435 - MGP_129S1SvImJ_P0095343 Zdhhc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095344.1 MGP_129S1SvImJ_G0035471.1 mouse_genomes_project 9 126100890 126135518 - Zdhhc3 protein_coding retained_intron MGP_129S1SvImJ_T0095345.1 MGP_129S1SvImJ_G0035471.1 mouse_genomes_project 9 126102338 126135438 - MGP_129S1SvImJ_P0095345 Zdhhc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095346.1 MGP_129S1SvImJ_G0035471.1 mouse_genomes_project 9 126107075 126135492 - MGP_129S1SvImJ_P0095346 Zdhhc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095347.1 MGP_129S1SvImJ_G0035471.1 mouse_genomes_project 9 126122643 126135146 - MGP_129S1SvImJ_P0095347 Zdhhc3 protein_coding protein_coding MGP_129S1SvImJ_T0093161.1 MGP_129S1SvImJ_G0035021.1 mouse_genomes_project 9 73161029 73222782 + MGP_129S1SvImJ_P0093161 Gm44503 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093461.1 MGP_129S1SvImJ_G0035092.1 mouse_genomes_project 9 86465186 86529286 - MGP_129S1SvImJ_P0093461 Ibtk protein_coding protein_coding MGP_129S1SvImJ_T0093462.1 MGP_129S1SvImJ_G0035092.1 mouse_genomes_project 9 86465380 86529286 - MGP_129S1SvImJ_P0093462 Ibtk protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093463.1 MGP_129S1SvImJ_G0035092.1 mouse_genomes_project 9 86465394 86499528 - Ibtk protein_coding retained_intron MGP_129S1SvImJ_T0093464.1 MGP_129S1SvImJ_G0035092.1 mouse_genomes_project 9 86486844 86497246 - Ibtk protein_coding retained_intron MGP_129S1SvImJ_T0093465.1 MGP_129S1SvImJ_G0035092.1 mouse_genomes_project 9 86498887 86529266 - Ibtk protein_coding retained_intron MGP_129S1SvImJ_T0093466.1 MGP_129S1SvImJ_G0035092.1 mouse_genomes_project 9 86506995 86510130 - Ibtk protein_coding retained_intron MGP_129S1SvImJ_T0002462.1 MGP_129S1SvImJ_G0002371.1 mouse_genomes_project 9 103833351 103835437 + TEC TEC MGP_129S1SvImJ_T0092073.1 MGP_129S1SvImJ_G0034717.1 mouse_genomes_project 9 43270532 43297818 - MGP_129S1SvImJ_P0092073 Arcn1 protein_coding protein_coding MGP_129S1SvImJ_T0092074.1 MGP_129S1SvImJ_G0034717.1 mouse_genomes_project 9 43285010 43297771 - Arcn1 protein_coding retained_intron MGP_129S1SvImJ_T0092075.1 MGP_129S1SvImJ_G0034717.1 mouse_genomes_project 9 43285963 43290021 - Arcn1 protein_coding processed_transcript MGP_129S1SvImJ_T0101435.1 MGP_129S1SvImJ_G0039502.1 mouse_genomes_project 9 12309370 12309440 - Scarna9 snoRNA snoRNA MGP_129S1SvImJ_T0094449.1 MGP_129S1SvImJ_G0035281.1 mouse_genomes_project 9 109918814 109973375 + MGP_129S1SvImJ_P0094449 Ip6k1 protein_coding protein_coding MGP_129S1SvImJ_T0094450.1 MGP_129S1SvImJ_G0035281.1 mouse_genomes_project 9 109918942 109969466 + MGP_129S1SvImJ_P0094450 Ip6k1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094451.1 MGP_129S1SvImJ_G0035281.1 mouse_genomes_project 9 109918947 109970312 + Ip6k1 protein_coding processed_transcript MGP_129S1SvImJ_T0094452.1 MGP_129S1SvImJ_G0035281.1 mouse_genomes_project 9 109918956 109970710 + Ip6k1 protein_coding retained_intron MGP_129S1SvImJ_T0094453.1 MGP_129S1SvImJ_G0035281.1 mouse_genomes_project 9 109918959 109956074 + MGP_129S1SvImJ_P0094453 Ip6k1 protein_coding protein_coding MGP_129S1SvImJ_T0094454.1 MGP_129S1SvImJ_G0035281.1 mouse_genomes_project 9 109918984 109963247 + MGP_129S1SvImJ_P0094454 Ip6k1 protein_coding protein_coding MGP_129S1SvImJ_T0094455.1 MGP_129S1SvImJ_G0035281.1 mouse_genomes_project 9 109945318 109970208 + MGP_129S1SvImJ_P0094455 Ip6k1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094456.1 MGP_129S1SvImJ_G0035281.1 mouse_genomes_project 9 109945350 109952950 + Ip6k1 protein_coding processed_transcript MGP_129S1SvImJ_T0094457.1 MGP_129S1SvImJ_G0035281.1 mouse_genomes_project 9 109952918 109970744 + MGP_129S1SvImJ_P0094457 Ip6k1 protein_coding protein_coding MGP_129S1SvImJ_T0094458.1 MGP_129S1SvImJ_G0035281.1 mouse_genomes_project 9 109969481 109970140 + MGP_129S1SvImJ_P0094458 Ip6k1 protein_coding protein_coding MGP_129S1SvImJ_T0002478.1 MGP_129S1SvImJ_G0002387.1 mouse_genomes_project 9 109725769 109726845 - TEC TEC MGP_129S1SvImJ_T0005580.1 MGP_129S1SvImJ_G0004708.1 mouse_genomes_project 9 123832289 123838637 - 4930593C16Rik antisense antisense MGP_129S1SvImJ_T0011132.1 MGP_129S1SvImJ_G0009248.1 mouse_genomes_project 9 121745759 121745849 + Mir26a-1 miRNA miRNA MGP_129S1SvImJ_T0100151.1 MGP_129S1SvImJ_G0038218.1 mouse_genomes_project 9 94252 94356 + Gm23275 snRNA snRNA MGP_129S1SvImJ_T0099026.1 MGP_129S1SvImJ_G0037098.1 mouse_genomes_project 9 117699266 117702772 + Gm27002 sense_intronic sense_intronic MGP_129S1SvImJ_T0101778.1 MGP_129S1SvImJ_G0039755.1 mouse_genomes_project 9 56096176 56096735 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0005568.1 MGP_129S1SvImJ_G0004699.1 mouse_genomes_project 9 112110418 112113286 - Gm43732 antisense antisense MGP_129S1SvImJ_T0009285.1 MGP_129S1SvImJ_G0007462.1 mouse_genomes_project 9 77795087 77832224 - 5730403I07Rik lincRNA lincRNA MGP_129S1SvImJ_T0100158.1 MGP_129S1SvImJ_G0038225.1 mouse_genomes_project 9 17319727 17319872 - Gm26290 snRNA snRNA MGP_129S1SvImJ_T0101444.1 MGP_129S1SvImJ_G0039511.1 mouse_genomes_project 9 31705653 31705784 + Gm25439 snoRNA snoRNA MGP_129S1SvImJ_T0011094.1 MGP_129S1SvImJ_G0009210.1 mouse_genomes_project 9 61765401 61765506 - Gm25603 miRNA miRNA MGP_129S1SvImJ_T0092224.1 MGP_129S1SvImJ_G0034763.1 mouse_genomes_project 9 47368894 47374394 - Nnmt protein_coding processed_transcript MGP_129S1SvImJ_T0092225.1 MGP_129S1SvImJ_G0034763.1 mouse_genomes_project 9 47368894 47382004 - MGP_129S1SvImJ_P0092225 Nnmt protein_coding protein_coding MGP_129S1SvImJ_T0092226.1 MGP_129S1SvImJ_G0034763.1 mouse_genomes_project 9 47368894 47382004 - MGP_129S1SvImJ_P0092226 Nnmt protein_coding protein_coding MGP_129S1SvImJ_T0092227.1 MGP_129S1SvImJ_G0034763.1 mouse_genomes_project 9 47368908 47374468 - Nnmt protein_coding processed_transcript MGP_129S1SvImJ_T0092228.1 MGP_129S1SvImJ_G0034763.1 mouse_genomes_project 9 47380146 47381928 - Nnmt protein_coding retained_intron MGP_129S1SvImJ_T0093677.1 MGP_129S1SvImJ_G0035140.1 mouse_genomes_project 9 97113653 97215091 + MGP_129S1SvImJ_P0093677 Xrn1 protein_coding protein_coding MGP_129S1SvImJ_T0093678.1 MGP_129S1SvImJ_G0035140.1 mouse_genomes_project 9 97113660 97221061 + MGP_129S1SvImJ_P0093678 Xrn1 protein_coding protein_coding MGP_129S1SvImJ_T0093679.1 MGP_129S1SvImJ_G0035140.1 mouse_genomes_project 9 97113686 97126674 + MGP_129S1SvImJ_P0093679 Xrn1 protein_coding protein_coding MGP_129S1SvImJ_T0093680.1 MGP_129S1SvImJ_G0035140.1 mouse_genomes_project 9 97113725 97159883 + Xrn1 protein_coding retained_intron MGP_129S1SvImJ_T0093681.1 MGP_129S1SvImJ_G0035140.1 mouse_genomes_project 9 97113752 97215091 + Xrn1 protein_coding retained_intron MGP_129S1SvImJ_T0093682.1 MGP_129S1SvImJ_G0035140.1 mouse_genomes_project 9 97113755 97172249 + MGP_129S1SvImJ_P0093682 Xrn1 protein_coding protein_coding MGP_129S1SvImJ_T0093683.1 MGP_129S1SvImJ_G0035140.1 mouse_genomes_project 9 97130697 97134312 + Xrn1 protein_coding retained_intron MGP_129S1SvImJ_T0093684.1 MGP_129S1SvImJ_G0035140.1 mouse_genomes_project 9 97132469 97137827 + Xrn1 protein_coding retained_intron MGP_129S1SvImJ_T0093685.1 MGP_129S1SvImJ_G0035140.1 mouse_genomes_project 9 97179493 97182538 + Xrn1 protein_coding retained_intron MGP_129S1SvImJ_T0005472.1 MGP_129S1SvImJ_G0004632.1 mouse_genomes_project 9 56269383 56300350 - Man2c1os antisense antisense MGP_129S1SvImJ_T0005473.1 MGP_129S1SvImJ_G0004632.1 mouse_genomes_project 9 56297163 56299958 - Man2c1os antisense antisense MGP_129S1SvImJ_T0005474.1 MGP_129S1SvImJ_G0004632.1 mouse_genomes_project 9 56299035 56300304 - Man2c1os antisense antisense MGP_129S1SvImJ_T0016060.1 MGP_129S1SvImJ_G0014149.1 mouse_genomes_project 9 59142037 59142529 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0094110.1 MGP_129S1SvImJ_G0035229.1 mouse_genomes_project 9 108241574 108246889 - MGP_129S1SvImJ_P0094110 Acy1 protein_coding protein_coding MGP_129S1SvImJ_T0094111.1 MGP_129S1SvImJ_G0035229.1 mouse_genomes_project 9 108241577 108246747 - Acy1 protein_coding retained_intron MGP_129S1SvImJ_T0094112.1 MGP_129S1SvImJ_G0035229.1 mouse_genomes_project 9 108241583 108243287 - Acy1 protein_coding retained_intron MGP_129S1SvImJ_T0094113.1 MGP_129S1SvImJ_G0035229.1 mouse_genomes_project 9 108243292 108244951 - Acy1 protein_coding retained_intron MGP_129S1SvImJ_T0094114.1 MGP_129S1SvImJ_G0035229.1 mouse_genomes_project 9 108243534 108246772 - MGP_129S1SvImJ_P0094114 Acy1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094115.1 MGP_129S1SvImJ_G0035229.1 mouse_genomes_project 9 108243665 108246889 - MGP_129S1SvImJ_P0094115 Acy1 protein_coding protein_coding MGP_129S1SvImJ_T0094116.1 MGP_129S1SvImJ_G0035229.1 mouse_genomes_project 9 108245466 108246757 - MGP_129S1SvImJ_P0094116 Acy1 protein_coding protein_coding MGP_129S1SvImJ_T0005538.1 MGP_129S1SvImJ_G0004676.1 mouse_genomes_project 9 107064693 107072939 + antisense antisense MGP_129S1SvImJ_T0092932.1 MGP_129S1SvImJ_G0034977.1 mouse_genomes_project 9 66360192 66447345 - MGP_129S1SvImJ_P0092932 Usp3 protein_coding protein_coding MGP_129S1SvImJ_T0092933.1 MGP_129S1SvImJ_G0034977.1 mouse_genomes_project 9 66363452 66447203 - MGP_129S1SvImJ_P0092933 Usp3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092934.1 MGP_129S1SvImJ_G0034977.1 mouse_genomes_project 9 66364445 66447239 - MGP_129S1SvImJ_P0092934 Usp3 protein_coding protein_coding MGP_129S1SvImJ_T0092935.1 MGP_129S1SvImJ_G0034977.1 mouse_genomes_project 9 66365095 66447161 - Usp3 protein_coding retained_intron MGP_129S1SvImJ_T0092936.1 MGP_129S1SvImJ_G0034977.1 mouse_genomes_project 9 66365293 66447209 - MGP_129S1SvImJ_P0092936 Usp3 protein_coding protein_coding MGP_129S1SvImJ_T0092937.1 MGP_129S1SvImJ_G0034977.1 mouse_genomes_project 9 66365467 66367555 - Usp3 protein_coding retained_intron MGP_129S1SvImJ_T0092938.1 MGP_129S1SvImJ_G0034977.1 mouse_genomes_project 9 66365626 66368036 - Usp3 protein_coding retained_intron MGP_129S1SvImJ_T0092939.1 MGP_129S1SvImJ_G0034977.1 mouse_genomes_project 9 66373876 66377618 - Usp3 protein_coding retained_intron MGP_129S1SvImJ_T0092940.1 MGP_129S1SvImJ_G0034977.1 mouse_genomes_project 9 66374191 66390674 - Usp3 protein_coding processed_transcript MGP_129S1SvImJ_T0092941.1 MGP_129S1SvImJ_G0034977.1 mouse_genomes_project 9 66395785 66421174 - Usp3 protein_coding retained_intron MGP_129S1SvImJ_T0092942.1 MGP_129S1SvImJ_G0034977.1 mouse_genomes_project 9 66399548 66430258 - Usp3 protein_coding processed_transcript MGP_129S1SvImJ_T0016033.1 MGP_129S1SvImJ_G0014122.1 mouse_genomes_project 9 22218818 22219821 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098663.1 MGP_129S1SvImJ_G0036748.1 mouse_genomes_project 9 62049824 62049933 + n-R5s84 rRNA rRNA MGP_129S1SvImJ_T0091486.1 MGP_129S1SvImJ_G0034475.1 mouse_genomes_project 9 19342329 19358230 - MGP_129S1SvImJ_P0091486 Zfp653 protein_coding protein_coding MGP_129S1SvImJ_T0091487.1 MGP_129S1SvImJ_G0034475.1 mouse_genomes_project 9 19342329 19358230 - MGP_129S1SvImJ_P0091487 Zfp653 protein_coding protein_coding MGP_129S1SvImJ_T0098403.1 MGP_129S1SvImJ_G0036488.1 mouse_genomes_project 9 16038249 16038518 - pseudogene pseudogene MGP_129S1SvImJ_T0091144.1 MGP_129S1SvImJ_G0034333.1 mouse_genomes_project 9 4973085 5036050 - MGP_129S1SvImJ_P0091144 Cep126 protein_coding protein_coding MGP_129S1SvImJ_T0094596.1 MGP_129S1SvImJ_G0035303.1 mouse_genomes_project 9 110477817 110499069 + MGP_129S1SvImJ_P0094596 Qrich1 protein_coding protein_coding MGP_129S1SvImJ_T0094597.1 MGP_129S1SvImJ_G0035303.1 mouse_genomes_project 9 110478098 110494048 + MGP_129S1SvImJ_P0094597 Qrich1 protein_coding protein_coding MGP_129S1SvImJ_T0094598.1 MGP_129S1SvImJ_G0035303.1 mouse_genomes_project 9 110478114 110511982 + MGP_129S1SvImJ_P0094598 Qrich1 protein_coding protein_coding MGP_129S1SvImJ_T0094599.1 MGP_129S1SvImJ_G0035303.1 mouse_genomes_project 9 110478121 110527352 + MGP_129S1SvImJ_P0094599 Qrich1 protein_coding protein_coding MGP_129S1SvImJ_T0094600.1 MGP_129S1SvImJ_G0035303.1 mouse_genomes_project 9 110478125 110527524 + MGP_129S1SvImJ_P0094600 Qrich1 protein_coding protein_coding MGP_129S1SvImJ_T0094601.1 MGP_129S1SvImJ_G0035303.1 mouse_genomes_project 9 110478163 110494034 + MGP_129S1SvImJ_P0094601 Qrich1 protein_coding protein_coding MGP_129S1SvImJ_T0094602.1 MGP_129S1SvImJ_G0035303.1 mouse_genomes_project 9 110478166 110494074 + MGP_129S1SvImJ_P0094602 Qrich1 protein_coding protein_coding MGP_129S1SvImJ_T0094603.1 MGP_129S1SvImJ_G0035303.1 mouse_genomes_project 9 110478167 110511751 + MGP_129S1SvImJ_P0094603 Qrich1 protein_coding protein_coding MGP_129S1SvImJ_T0094604.1 MGP_129S1SvImJ_G0035303.1 mouse_genomes_project 9 110480711 110495802 + Qrich1 protein_coding retained_intron MGP_129S1SvImJ_T0094605.1 MGP_129S1SvImJ_G0035303.1 mouse_genomes_project 9 110480735 110494070 + MGP_129S1SvImJ_P0094605 Qrich1 protein_coding protein_coding MGP_129S1SvImJ_T0094606.1 MGP_129S1SvImJ_G0035303.1 mouse_genomes_project 9 110493586 110498819 + MGP_129S1SvImJ_P0094606 Qrich1 protein_coding protein_coding MGP_129S1SvImJ_T0094607.1 MGP_129S1SvImJ_G0035303.1 mouse_genomes_project 9 110523579 110526928 + Qrich1 protein_coding retained_intron MGP_129S1SvImJ_T0094608.1 MGP_129S1SvImJ_G0035303.1 mouse_genomes_project 9 110523917 110526759 + Qrich1 protein_coding retained_intron MGP_129S1SvImJ_T0091302.1 MGP_129S1SvImJ_G0034401.1 mouse_genomes_project 9 16872337 16876033 + MGP_129S1SvImJ_P0091302 protein_coding protein_coding MGP_129S1SvImJ_T0093879.1 MGP_129S1SvImJ_G0035184.1 mouse_genomes_project 9 103440565 103915411 - MGP_129S1SvImJ_P0093879 Ephb1 protein_coding protein_coding MGP_129S1SvImJ_T0093880.1 MGP_129S1SvImJ_G0035184.1 mouse_genomes_project 9 103441008 103915411 - MGP_129S1SvImJ_P0093880 Ephb1 protein_coding protein_coding MGP_129S1SvImJ_T0093882.1 MGP_129S1SvImJ_G0035184.1 mouse_genomes_project 9 103579063 103915411 - MGP_129S1SvImJ_P0093882 Ephb1 protein_coding protein_coding MGP_129S1SvImJ_T0100160.1 MGP_129S1SvImJ_G0038227.1 mouse_genomes_project 9 17618293 17618407 + Gm23316 snRNA snRNA MGP_129S1SvImJ_T0002422.1 MGP_129S1SvImJ_G0002331.1 mouse_genomes_project 9 87530249 87531408 - TEC TEC MGP_129S1SvImJ_T0009225.1 MGP_129S1SvImJ_G0007414.1 mouse_genomes_project 9 30584646 30606537 + Gm3331 lincRNA lincRNA MGP_129S1SvImJ_T0002390.1 MGP_129S1SvImJ_G0002300.1 mouse_genomes_project 9 72137057 72139483 - TEC TEC MGP_129S1SvImJ_T0100157.1 MGP_129S1SvImJ_G0038224.1 mouse_genomes_project 9 17282830 17282983 + Gm25914 snRNA snRNA MGP_129S1SvImJ_T0092859.1 MGP_129S1SvImJ_G0034959.1 mouse_genomes_project 9 65169179 65188416 + MGP_129S1SvImJ_P0092859 Mtfmt protein_coding protein_coding MGP_129S1SvImJ_T0092860.1 MGP_129S1SvImJ_G0034959.1 mouse_genomes_project 9 65169185 65187775 + Mtfmt protein_coding retained_intron MGP_129S1SvImJ_T0092861.1 MGP_129S1SvImJ_G0034959.1 mouse_genomes_project 9 65170404 65182644 + Mtfmt protein_coding processed_transcript MGP_129S1SvImJ_T0092862.1 MGP_129S1SvImJ_G0034959.1 mouse_genomes_project 9 65178922 65187483 + Mtfmt protein_coding retained_intron MGP_129S1SvImJ_T0091495.1 MGP_129S1SvImJ_G0034479.1 mouse_genomes_project 9 19416950 19422085 - MGP_129S1SvImJ_P0091495 Acp5 protein_coding protein_coding MGP_129S1SvImJ_T0091496.1 MGP_129S1SvImJ_G0034479.1 mouse_genomes_project 9 19416950 19425945 - MGP_129S1SvImJ_P0091496 Acp5 protein_coding protein_coding MGP_129S1SvImJ_T0091497.1 MGP_129S1SvImJ_G0034479.1 mouse_genomes_project 9 19416950 19420818 - MGP_129S1SvImJ_P0091497 Acp5 protein_coding protein_coding MGP_129S1SvImJ_T0095099.1 MGP_129S1SvImJ_G0035398.1 mouse_genomes_project 9 117742029 117815420 - MGP_129S1SvImJ_P0095099 Stt3b protein_coding protein_coding MGP_129S1SvImJ_T0002436.1 MGP_129S1SvImJ_G0002345.1 mouse_genomes_project 9 92395235 92396119 - TEC TEC MGP_129S1SvImJ_T0009329.1 MGP_129S1SvImJ_G0007497.1 mouse_genomes_project 9 104123958 104135302 + Gm29387 lincRNA lincRNA MGP_129S1SvImJ_T0092701.1 MGP_129S1SvImJ_G0034913.1 mouse_genomes_project 9 60246498 60267006 - MGP_129S1SvImJ_P0092701 Gm9869 protein_coding protein_coding MGP_129S1SvImJ_T0094292.1 MGP_129S1SvImJ_G0035263.1 mouse_genomes_project 9 109472444 109477880 + MGP_129S1SvImJ_P0094292 Ifrd2 protein_coding protein_coding MGP_129S1SvImJ_T0094293.1 MGP_129S1SvImJ_G0035263.1 mouse_genomes_project 9 109472528 109477880 + Ifrd2 protein_coding retained_intron MGP_129S1SvImJ_T0094294.1 MGP_129S1SvImJ_G0035263.1 mouse_genomes_project 9 109472559 109476496 + MGP_129S1SvImJ_P0094294 Ifrd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094295.1 MGP_129S1SvImJ_G0035263.1 mouse_genomes_project 9 109475237 109476109 + Ifrd2 protein_coding retained_intron MGP_129S1SvImJ_T0094296.1 MGP_129S1SvImJ_G0035263.1 mouse_genomes_project 9 109475908 109477550 + MGP_129S1SvImJ_P0094296 Ifrd2 protein_coding protein_coding MGP_129S1SvImJ_T0094297.1 MGP_129S1SvImJ_G0035263.1 mouse_genomes_project 9 109476926 109477596 + MGP_129S1SvImJ_P0094297 Ifrd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094298.1 MGP_129S1SvImJ_G0035263.1 mouse_genomes_project 9 109477468 109478231 + Ifrd2 protein_coding processed_transcript MGP_129S1SvImJ_T0091292.1 MGP_129S1SvImJ_G0034391.1 mouse_genomes_project 9 16408439 16409381 - MGP_129S1SvImJ_P0091292 Olfr846 protein_coding protein_coding MGP_129S1SvImJ_T0002384.1 MGP_129S1SvImJ_G0002294.1 mouse_genomes_project 9 57851808 57852839 + TEC TEC MGP_129S1SvImJ_T0091296.1 MGP_129S1SvImJ_G0034395.1 mouse_genomes_project 9 16544404 16545343 + MGP_129S1SvImJ_P0091296 Olfr851 protein_coding protein_coding MGP_129S1SvImJ_T0091113.1 MGP_129S1SvImJ_G0034325.1 mouse_genomes_project 9 4433531 4445148 + MGP_129S1SvImJ_P0091113 Mmp27 protein_coding protein_coding MGP_129S1SvImJ_T0091114.1 MGP_129S1SvImJ_G0034325.1 mouse_genomes_project 9 4433593 4445143 + MGP_129S1SvImJ_P0091114 Mmp27 protein_coding protein_coding MGP_129S1SvImJ_T0091115.1 MGP_129S1SvImJ_G0034325.1 mouse_genomes_project 9 4433598 4445618 + MGP_129S1SvImJ_P0091115 Mmp27 protein_coding protein_coding MGP_129S1SvImJ_T0101502.1 MGP_129S1SvImJ_G0039569.1 mouse_genomes_project 9 122955475 122955678 + Gm26448 snoRNA snoRNA MGP_129S1SvImJ_T0093403.1 MGP_129S1SvImJ_G0035083.1 mouse_genomes_project 9 83480547 83499837 + MGP_129S1SvImJ_P0093403 Irak1bp1 protein_coding protein_coding MGP_129S1SvImJ_T0093404.1 MGP_129S1SvImJ_G0035083.1 mouse_genomes_project 9 83480813 83499170 + MGP_129S1SvImJ_P0093404 Irak1bp1 protein_coding protein_coding MGP_129S1SvImJ_T0091068.1 MGP_129S1SvImJ_G0034307.1 mouse_genomes_project 9 228927 586743 + MGP_129S1SvImJ_P0091068 Gucy1a2 protein_coding protein_coding MGP_129S1SvImJ_T0091297.1 MGP_129S1SvImJ_G0034396.1 mouse_genomes_project 9 16582589 16583507 - MGP_129S1SvImJ_P0091297 Olfr853 protein_coding protein_coding MGP_129S1SvImJ_T0009289.1 MGP_129S1SvImJ_G0007466.1 mouse_genomes_project 9 81778797 81801229 + Gm26713 lincRNA lincRNA MGP_129S1SvImJ_T0016084.1 MGP_129S1SvImJ_G0014173.1 mouse_genomes_project 9 77044022 77044776 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0092387.1 MGP_129S1SvImJ_G0034816.1 mouse_genomes_project 9 52809240 52861339 + MGP_129S1SvImJ_P0092387 Slc35f2 protein_coding protein_coding MGP_129S1SvImJ_T0092895.1 MGP_129S1SvImJ_G0034969.1 mouse_genomes_project 9 65707910 65843788 + MGP_129S1SvImJ_P0092895 Csnk1g1 protein_coding protein_coding MGP_129S1SvImJ_T0092896.1 MGP_129S1SvImJ_G0034969.1 mouse_genomes_project 9 65707960 65799158 + Csnk1g1 protein_coding retained_intron MGP_129S1SvImJ_T0092897.1 MGP_129S1SvImJ_G0034969.1 mouse_genomes_project 9 65707963 65846896 + MGP_129S1SvImJ_P0092897 Csnk1g1 protein_coding protein_coding MGP_129S1SvImJ_T0092898.1 MGP_129S1SvImJ_G0034969.1 mouse_genomes_project 9 65707972 65846902 + MGP_129S1SvImJ_P0092898 Csnk1g1 protein_coding protein_coding MGP_129S1SvImJ_T0092899.1 MGP_129S1SvImJ_G0034969.1 mouse_genomes_project 9 65708006 65757472 + MGP_129S1SvImJ_P0092899 Csnk1g1 protein_coding protein_coding MGP_129S1SvImJ_T0092900.1 MGP_129S1SvImJ_G0034969.1 mouse_genomes_project 9 65708016 65774279 + Csnk1g1 protein_coding retained_intron MGP_129S1SvImJ_T0092901.1 MGP_129S1SvImJ_G0034969.1 mouse_genomes_project 9 65708074 65842320 + MGP_129S1SvImJ_P0092901 Csnk1g1 protein_coding protein_coding MGP_129S1SvImJ_T0092902.1 MGP_129S1SvImJ_G0034969.1 mouse_genomes_project 9 65709457 65844957 + MGP_129S1SvImJ_P0092902 Csnk1g1 protein_coding protein_coding MGP_129S1SvImJ_T0092903.1 MGP_129S1SvImJ_G0034969.1 mouse_genomes_project 9 65725700 65832767 + MGP_129S1SvImJ_P0092903 Csnk1g1 protein_coding protein_coding MGP_129S1SvImJ_T0092904.1 MGP_129S1SvImJ_G0034969.1 mouse_genomes_project 9 65757160 65846892 + MGP_129S1SvImJ_P0092904 Csnk1g1 protein_coding protein_coding MGP_129S1SvImJ_T0092905.1 MGP_129S1SvImJ_G0034969.1 mouse_genomes_project 9 65804386 65834244 + MGP_129S1SvImJ_P0092905 Csnk1g1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092906.1 MGP_129S1SvImJ_G0034969.1 mouse_genomes_project 9 65806697 65811320 + Csnk1g1 protein_coding retained_intron MGP_129S1SvImJ_T0092907.1 MGP_129S1SvImJ_G0034969.1 mouse_genomes_project 9 65806721 65841609 + MGP_129S1SvImJ_P0092907 Csnk1g1 protein_coding protein_coding MGP_129S1SvImJ_T0092908.1 MGP_129S1SvImJ_G0034969.1 mouse_genomes_project 9 65807064 65832767 + MGP_129S1SvImJ_P0092908 Csnk1g1 protein_coding protein_coding MGP_129S1SvImJ_T0092909.1 MGP_129S1SvImJ_G0034969.1 mouse_genomes_project 9 65837898 65841627 + Csnk1g1 protein_coding retained_intron MGP_129S1SvImJ_T0093542.1 MGP_129S1SvImJ_G0035109.1 mouse_genomes_project 9 89324727 89361389 - MGP_129S1SvImJ_P0093542 Syncrip protein_coding protein_coding MGP_129S1SvImJ_T0093543.1 MGP_129S1SvImJ_G0035109.1 mouse_genomes_project 9 89330155 89359568 - MGP_129S1SvImJ_P0093543 Syncrip protein_coding protein_coding MGP_129S1SvImJ_T0093544.1 MGP_129S1SvImJ_G0035109.1 mouse_genomes_project 9 89330357 89360998 - MGP_129S1SvImJ_P0093544 Syncrip protein_coding protein_coding MGP_129S1SvImJ_T0093545.1 MGP_129S1SvImJ_G0035109.1 mouse_genomes_project 9 89330406 89361063 - MGP_129S1SvImJ_P0093545 Syncrip protein_coding protein_coding MGP_129S1SvImJ_T0093546.1 MGP_129S1SvImJ_G0035109.1 mouse_genomes_project 9 89331655 89361016 - MGP_129S1SvImJ_P0093546 Syncrip protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093547.1 MGP_129S1SvImJ_G0035109.1 mouse_genomes_project 9 89333841 89361073 - MGP_129S1SvImJ_P0093547 Syncrip protein_coding protein_coding MGP_129S1SvImJ_T0093548.1 MGP_129S1SvImJ_G0035109.1 mouse_genomes_project 9 89333841 89359556 - MGP_129S1SvImJ_P0093548 Syncrip protein_coding protein_coding MGP_129S1SvImJ_T0093549.1 MGP_129S1SvImJ_G0035109.1 mouse_genomes_project 9 89343393 89359547 - Syncrip protein_coding retained_intron MGP_129S1SvImJ_T0093550.1 MGP_129S1SvImJ_G0035109.1 mouse_genomes_project 9 89355656 89359972 - MGP_129S1SvImJ_P0093550 Syncrip protein_coding protein_coding MGP_129S1SvImJ_T0093551.1 MGP_129S1SvImJ_G0035109.1 mouse_genomes_project 9 89357525 89360027 - Syncrip protein_coding retained_intron MGP_129S1SvImJ_T0093552.1 MGP_129S1SvImJ_G0035109.1 mouse_genomes_project 9 89358464 89361389 - MGP_129S1SvImJ_P0093552 Syncrip protein_coding protein_coding MGP_129S1SvImJ_T0095291.1 MGP_129S1SvImJ_G0035451.1 mouse_genomes_project 9 124758038 124804548 - MGP_129S1SvImJ_P0095291 Ccdc13 protein_coding protein_coding MGP_129S1SvImJ_T0095292.1 MGP_129S1SvImJ_G0035451.1 mouse_genomes_project 9 124758044 124774979 - MGP_129S1SvImJ_P0095292 Ccdc13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095293.1 MGP_129S1SvImJ_G0035451.1 mouse_genomes_project 9 124758579 124775125 - Ccdc13 protein_coding retained_intron MGP_129S1SvImJ_T0095294.1 MGP_129S1SvImJ_G0035451.1 mouse_genomes_project 9 124759983 124774961 - MGP_129S1SvImJ_P0095294 Ccdc13 protein_coding protein_coding MGP_129S1SvImJ_T0095295.1 MGP_129S1SvImJ_G0035451.1 mouse_genomes_project 9 124760494 124775064 - Ccdc13 protein_coding retained_intron MGP_129S1SvImJ_T0095296.1 MGP_129S1SvImJ_G0035451.1 mouse_genomes_project 9 124782176 124795964 - Ccdc13 protein_coding retained_intron MGP_129S1SvImJ_T0009362.1 MGP_129S1SvImJ_G0007522.1 mouse_genomes_project 9 125289038 125293839 - Gm26797 lincRNA lincRNA MGP_129S1SvImJ_T0094152.1 MGP_129S1SvImJ_G0035235.1 mouse_genomes_project 9 108290148 108297163 + Rrp9 protein_coding processed_transcript MGP_129S1SvImJ_T0094153.1 MGP_129S1SvImJ_G0035235.1 mouse_genomes_project 9 108291454 108300713 + MGP_129S1SvImJ_P0094153 Rrp9 protein_coding protein_coding MGP_129S1SvImJ_T0094154.1 MGP_129S1SvImJ_G0035235.1 mouse_genomes_project 9 108291503 108300705 + Rrp9 protein_coding retained_intron MGP_129S1SvImJ_T0094155.1 MGP_129S1SvImJ_G0035235.1 mouse_genomes_project 9 108291515 108292176 + Rrp9 protein_coding retained_intron MGP_129S1SvImJ_T0094156.1 MGP_129S1SvImJ_G0035235.1 mouse_genomes_project 9 108299142 108300711 + MGP_129S1SvImJ_P0094156 Rrp9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094157.1 MGP_129S1SvImJ_G0035235.1 mouse_genomes_project 9 108299752 108300713 + Rrp9 protein_coding retained_intron MGP_129S1SvImJ_T0101433.1 MGP_129S1SvImJ_G0039500.1 mouse_genomes_project 9 12299595 12299695 + snoRNA snoRNA MGP_129S1SvImJ_T0009337.1 MGP_129S1SvImJ_G0007504.1 mouse_genomes_project 9 109208297 109209069 - 4930429P21Rik lincRNA lincRNA MGP_129S1SvImJ_T0009338.1 MGP_129S1SvImJ_G0007504.1 mouse_genomes_project 9 109208806 109211024 - 4930429P21Rik lincRNA lincRNA MGP_129S1SvImJ_T0094617.1 MGP_129S1SvImJ_G0035305.1 mouse_genomes_project 9 110533242 110534276 - Ndufaf3 protein_coding retained_intron MGP_129S1SvImJ_T0094618.1 MGP_129S1SvImJ_G0035305.1 mouse_genomes_project 9 110533324 110534293 - MGP_129S1SvImJ_P0094618 Ndufaf3 protein_coding protein_coding MGP_129S1SvImJ_T0094619.1 MGP_129S1SvImJ_G0035305.1 mouse_genomes_project 9 110533542 110534296 - Ndufaf3 protein_coding retained_intron MGP_129S1SvImJ_T0091864.1 MGP_129S1SvImJ_G0034631.1 mouse_genomes_project 9 37409151 37410117 - MGP_129S1SvImJ_P0091864 Olfr948 protein_coding protein_coding MGP_129S1SvImJ_T0093560.1 MGP_129S1SvImJ_G0035113.1 mouse_genomes_project 9 89851200 89856280 + MGP_129S1SvImJ_P0093560 protein_coding protein_coding MGP_129S1SvImJ_T0095153.1 MGP_129S1SvImJ_G0035411.1 mouse_genomes_project 9 121816016 121838936 + Dlec1 protein_coding retained_intron MGP_129S1SvImJ_T0095154.1 MGP_129S1SvImJ_G0035411.1 mouse_genomes_project 9 121816016 121861906 + MGP_129S1SvImJ_P0095154 Dlec1 protein_coding protein_coding MGP_129S1SvImJ_T0095155.1 MGP_129S1SvImJ_G0035411.1 mouse_genomes_project 9 121816016 121861354 + MGP_129S1SvImJ_P0095155 Dlec1 protein_coding protein_coding MGP_129S1SvImJ_T0095156.1 MGP_129S1SvImJ_G0035411.1 mouse_genomes_project 9 121816047 121848352 + MGP_129S1SvImJ_P0095156 Dlec1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095157.1 MGP_129S1SvImJ_G0035411.1 mouse_genomes_project 9 121833193 121857940 + Dlec1 protein_coding retained_intron MGP_129S1SvImJ_T0095158.1 MGP_129S1SvImJ_G0035411.1 mouse_genomes_project 9 121840674 121841893 + Dlec1 protein_coding retained_intron MGP_129S1SvImJ_T0095159.1 MGP_129S1SvImJ_G0035411.1 mouse_genomes_project 9 121842029 121848350 + Dlec1 protein_coding retained_intron MGP_129S1SvImJ_T0095160.1 MGP_129S1SvImJ_G0035411.1 mouse_genomes_project 9 121842180 121843900 + Dlec1 protein_coding retained_intron MGP_129S1SvImJ_T0009257.1 MGP_129S1SvImJ_G0007440.1 mouse_genomes_project 9 57254357 57265641 + Gm17322 lincRNA lincRNA MGP_129S1SvImJ_T0093603.1 MGP_129S1SvImJ_G0035123.1 mouse_genomes_project 9 92371693 92380776 - MGP_129S1SvImJ_P0093603 Zic1 protein_coding protein_coding MGP_129S1SvImJ_T0093604.1 MGP_129S1SvImJ_G0035123.1 mouse_genomes_project 9 92376263 92380608 - MGP_129S1SvImJ_P0093604 Zic1 protein_coding protein_coding MGP_129S1SvImJ_T0093605.1 MGP_129S1SvImJ_G0035123.1 mouse_genomes_project 9 92376851 92378317 - Zic1 protein_coding processed_transcript MGP_129S1SvImJ_T0091126.1 MGP_129S1SvImJ_G0034330.1 mouse_genomes_project 9 4704651 4741344 - MGP_129S1SvImJ_P0091126 Birc3 protein_coding protein_coding MGP_129S1SvImJ_T0091127.1 MGP_129S1SvImJ_G0034330.1 mouse_genomes_project 9 4705646 4717104 - MGP_129S1SvImJ_P0091127 Birc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091128.1 MGP_129S1SvImJ_G0034330.1 mouse_genomes_project 9 4712896 4741303 - MGP_129S1SvImJ_P0091128 Birc3 protein_coding protein_coding MGP_129S1SvImJ_T0091129.1 MGP_129S1SvImJ_G0034330.1 mouse_genomes_project 9 4717568 4741490 - MGP_129S1SvImJ_P0091129 Birc3 protein_coding protein_coding MGP_129S1SvImJ_T0091130.1 MGP_129S1SvImJ_G0034330.1 mouse_genomes_project 9 4717587 4741506 - MGP_129S1SvImJ_P0091130 Birc3 protein_coding protein_coding MGP_129S1SvImJ_T0091131.1 MGP_129S1SvImJ_G0034330.1 mouse_genomes_project 9 4722970 4741177 - Birc3 protein_coding processed_transcript MGP_129S1SvImJ_T0091132.1 MGP_129S1SvImJ_G0034330.1 mouse_genomes_project 9 4725425 4741217 - Birc3 protein_coding processed_transcript MGP_129S1SvImJ_T0011057.1 MGP_129S1SvImJ_G0009173.1 mouse_genomes_project 9 4641496 4641547 + Mir5618 miRNA miRNA MGP_129S1SvImJ_T0091109.1 MGP_129S1SvImJ_G0034321.1 mouse_genomes_project 9 4308437 4319058 + MGP_129S1SvImJ_P0091109 Mmp3 protein_coding protein_coding MGP_129S1SvImJ_T0005471.1 MGP_129S1SvImJ_G0004631.1 mouse_genomes_project 9 55399880 55410421 + Peak1os antisense antisense MGP_129S1SvImJ_T0092351.1 MGP_129S1SvImJ_G0034803.1 mouse_genomes_project 9 50902942 50923177 - MGP_129S1SvImJ_P0092351 Fdx1 protein_coding protein_coding MGP_129S1SvImJ_T0100164.1 MGP_129S1SvImJ_G0038231.1 mouse_genomes_project 9 33288153 33288315 + Gm25630 snRNA snRNA MGP_129S1SvImJ_T0009222.1 MGP_129S1SvImJ_G0007411.1 mouse_genomes_project 9 22586653 22587100 + Gm29375 lincRNA lincRNA MGP_129S1SvImJ_T0091091.1 MGP_129S1SvImJ_G0034316.1 mouse_genomes_project 9 3114303 3115823 - MGP_129S1SvImJ_P0091091 Ddi1 protein_coding protein_coding MGP_129S1SvImJ_T0093885.1 MGP_129S1SvImJ_G0035187.1 mouse_genomes_project 9 104151058 104153067 - Cep63 protein_coding TEC MGP_129S1SvImJ_T0093886.1 MGP_129S1SvImJ_G0035187.1 mouse_genomes_project 9 104153038 104197431 - MGP_129S1SvImJ_P0093886 Cep63 protein_coding protein_coding MGP_129S1SvImJ_T0093887.1 MGP_129S1SvImJ_G0035187.1 mouse_genomes_project 9 104153145 104194891 - MGP_129S1SvImJ_P0093887 Cep63 protein_coding protein_coding MGP_129S1SvImJ_T0093888.1 MGP_129S1SvImJ_G0035187.1 mouse_genomes_project 9 104153151 104153635 - Cep63 protein_coding retained_intron MGP_129S1SvImJ_T0093889.1 MGP_129S1SvImJ_G0035187.1 mouse_genomes_project 9 104157996 104193271 - Cep63 protein_coding retained_intron MGP_129S1SvImJ_T0093890.1 MGP_129S1SvImJ_G0035187.1 mouse_genomes_project 9 104165814 104170348 - Cep63 protein_coding retained_intron MGP_129S1SvImJ_T0093891.1 MGP_129S1SvImJ_G0035187.1 mouse_genomes_project 9 104186620 104197330 - MGP_129S1SvImJ_P0093891 Cep63 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093892.1 MGP_129S1SvImJ_G0035187.1 mouse_genomes_project 9 104190123 104197816 - MGP_129S1SvImJ_P0093892 Cep63 protein_coding protein_coding MGP_129S1SvImJ_T0093893.1 MGP_129S1SvImJ_G0035187.1 mouse_genomes_project 9 104190173 104197816 - MGP_129S1SvImJ_P0093893 Cep63 protein_coding protein_coding MGP_129S1SvImJ_T0091251.1 MGP_129S1SvImJ_G0034367.1 mouse_genomes_project 9 12553991 12619677 - MGP_129S1SvImJ_P0091251 Ccdc67 protein_coding protein_coding MGP_129S1SvImJ_T0091252.1 MGP_129S1SvImJ_G0034367.1 mouse_genomes_project 9 12553997 12622198 - MGP_129S1SvImJ_P0091252 Ccdc67 protein_coding protein_coding MGP_129S1SvImJ_T0091253.1 MGP_129S1SvImJ_G0034367.1 mouse_genomes_project 9 12554683 12622168 - MGP_129S1SvImJ_P0091253 Ccdc67 protein_coding protein_coding MGP_129S1SvImJ_T0091254.1 MGP_129S1SvImJ_G0034367.1 mouse_genomes_project 9 12564200 12577034 - Ccdc67 protein_coding processed_transcript MGP_129S1SvImJ_T0091255.1 MGP_129S1SvImJ_G0034367.1 mouse_genomes_project 9 12573125 12622179 - MGP_129S1SvImJ_P0091255 Ccdc67 protein_coding protein_coding MGP_129S1SvImJ_T0005481.1 MGP_129S1SvImJ_G0004637.1 mouse_genomes_project 9 66258227 66261123 - Gm28379 antisense antisense MGP_129S1SvImJ_T0005482.1 MGP_129S1SvImJ_G0004637.1 mouse_genomes_project 9 66258784 66289890 - Gm28379 antisense antisense MGP_129S1SvImJ_T0091931.1 MGP_129S1SvImJ_G0034672.1 mouse_genomes_project 9 39146973 39216400 - MGP_129S1SvImJ_P0091931 Jhy protein_coding protein_coding MGP_129S1SvImJ_T0091932.1 MGP_129S1SvImJ_G0034672.1 mouse_genomes_project 9 39146975 39149743 - Jhy protein_coding retained_intron MGP_129S1SvImJ_T0091933.1 MGP_129S1SvImJ_G0034672.1 mouse_genomes_project 9 39213206 39214646 - MGP_129S1SvImJ_P0091933 Jhy protein_coding protein_coding MGP_129S1SvImJ_T0005530.1 MGP_129S1SvImJ_G0004669.1 mouse_genomes_project 9 99291556 99293906 + 4921534H16Rik antisense antisense MGP_129S1SvImJ_T0005531.1 MGP_129S1SvImJ_G0004669.1 mouse_genomes_project 9 99291556 99300298 + 4921534H16Rik antisense antisense MGP_129S1SvImJ_T0095329.1 MGP_129S1SvImJ_G0035467.1 mouse_genomes_project 9 125956548 125962460 - MGP_129S1SvImJ_P0095329 1110059G10Rik protein_coding protein_coding MGP_129S1SvImJ_T0095330.1 MGP_129S1SvImJ_G0035467.1 mouse_genomes_project 9 125958994 125962413 - MGP_129S1SvImJ_P0095330 1110059G10Rik protein_coding protein_coding MGP_129S1SvImJ_T0009323.1 MGP_129S1SvImJ_G0007491.1 mouse_genomes_project 9 100735599 100737042 + Gm28087 lincRNA lincRNA MGP_129S1SvImJ_T0091506.1 MGP_129S1SvImJ_G0034486.1 mouse_genomes_project 9 19725019 19764712 + MGP_129S1SvImJ_P0091506 9530077C05Rik protein_coding protein_coding MGP_129S1SvImJ_T0101458.1 MGP_129S1SvImJ_G0039525.1 mouse_genomes_project 9 59828576 59828699 + Gm22099 snoRNA snoRNA MGP_129S1SvImJ_T0094074.1 MGP_129S1SvImJ_G0035220.1 mouse_genomes_project 9 107932106 107937399 - MGP_129S1SvImJ_P0094074 protein_coding protein_coding MGP_129S1SvImJ_T0094075.1 MGP_129S1SvImJ_G0035220.1 mouse_genomes_project 9 107932118 107937419 - MGP_129S1SvImJ_P0094075 protein_coding protein_coding MGP_129S1SvImJ_T0094076.1 MGP_129S1SvImJ_G0035220.1 mouse_genomes_project 9 107936570 107937398 - MGP_129S1SvImJ_P0094076 protein_coding protein_coding MGP_129S1SvImJ_T0094077.1 MGP_129S1SvImJ_G0035220.1 mouse_genomes_project 9 107936869 107937391 - MGP_129S1SvImJ_P0094077 protein_coding protein_coding MGP_129S1SvImJ_T0101442.1 MGP_129S1SvImJ_G0039509.1 mouse_genomes_project 9 22965589 22965698 - Gm25861 snoRNA snoRNA MGP_129S1SvImJ_T0092547.1 MGP_129S1SvImJ_G0034870.1 mouse_genomes_project 9 56777240 56808788 + MGP_129S1SvImJ_P0092547 Scamp2 protein_coding protein_coding MGP_129S1SvImJ_T0011755.1 MGP_129S1SvImJ_G0009871.1 mouse_genomes_project 9 40869002 40869061 - Gm24420 misc_RNA misc_RNA MGP_129S1SvImJ_T0092538.1 MGP_129S1SvImJ_G0034865.1 mouse_genomes_project 9 56645704 56674032 - MGP_129S1SvImJ_P0092538 Scamp5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0000372.1 MGP_129S1SvImJ_G0000314.1 mouse_genomes_project 9 126129611 126129682 + mt-Tn Mt_tRNA Mt_tRNA MGP_129S1SvImJ_T0002372.1 MGP_129S1SvImJ_G0002282.1 mouse_genomes_project 9 30229457 30232502 - TEC TEC MGP_129S1SvImJ_T0011766.1 MGP_129S1SvImJ_G0009882.1 mouse_genomes_project 9 112241462 112241590 - Gm27855 misc_RNA misc_RNA MGP_129S1SvImJ_T0101450.1 MGP_129S1SvImJ_G0039517.1 mouse_genomes_project 9 39044447 39044533 + Snord14d snoRNA snoRNA MGP_129S1SvImJ_T0091306.1 MGP_129S1SvImJ_G0034405.1 mouse_genomes_project 9 17034336 17034823 - MGP_129S1SvImJ_P0091306 protein_coding protein_coding MGP_129S1SvImJ_T0091279.1 MGP_129S1SvImJ_G0034378.1 mouse_genomes_project 9 15520991 15532596 - MGP_129S1SvImJ_P0091279 protein_coding protein_coding MGP_129S1SvImJ_T0091290.1 MGP_129S1SvImJ_G0034389.1 mouse_genomes_project 9 16363843 16364773 + MGP_129S1SvImJ_P0091290 protein_coding protein_coding MGP_129S1SvImJ_T0002405.1 MGP_129S1SvImJ_G0002315.1 mouse_genomes_project 9 73174644 73175918 - TEC TEC MGP_129S1SvImJ_T0091414.1 MGP_129S1SvImJ_G0034449.1 mouse_genomes_project 9 18494952 18515781 - MGP_129S1SvImJ_P0091414 Ap1m2 protein_coding protein_coding MGP_129S1SvImJ_T0091415.1 MGP_129S1SvImJ_G0034449.1 mouse_genomes_project 9 18494952 18515781 - MGP_129S1SvImJ_P0091415 Ap1m2 protein_coding protein_coding MGP_129S1SvImJ_T0100213.1 MGP_129S1SvImJ_G0038280.1 mouse_genomes_project 9 108652656 108652761 - Gm22384 snRNA snRNA MGP_129S1SvImJ_T0093187.1 MGP_129S1SvImJ_G0035026.1 mouse_genomes_project 9 73319954 73321006 + MGP_129S1SvImJ_P0093187 Khdc3 protein_coding protein_coding MGP_129S1SvImJ_T0093188.1 MGP_129S1SvImJ_G0035026.1 mouse_genomes_project 9 73320516 73322557 + MGP_129S1SvImJ_P0093188 Khdc3 protein_coding protein_coding MGP_129S1SvImJ_T0093189.1 MGP_129S1SvImJ_G0035026.1 mouse_genomes_project 9 73320516 73322557 + MGP_129S1SvImJ_P0093189 Khdc3 protein_coding protein_coding MGP_129S1SvImJ_T0093191.1 MGP_129S1SvImJ_G0035026.1 mouse_genomes_project 9 73320628 73322311 + MGP_129S1SvImJ_P0093191 Khdc3 protein_coding protein_coding MGP_129S1SvImJ_T0018598.1 MGP_129S1SvImJ_G0015753.1 mouse_genomes_project 9 96766608 96767902 - Gm16127 processed_transcript processed_transcript MGP_129S1SvImJ_T0092878.1 MGP_129S1SvImJ_G0034965.1 mouse_genomes_project 9 65443279 65468196 + protein_coding processed_transcript MGP_129S1SvImJ_T0092879.1 MGP_129S1SvImJ_G0034965.1 mouse_genomes_project 9 65445873 65465859 + protein_coding processed_transcript MGP_129S1SvImJ_T0092880.1 MGP_129S1SvImJ_G0034965.1 mouse_genomes_project 9 65452698 65466581 + protein_coding retained_intron MGP_129S1SvImJ_T0092881.1 MGP_129S1SvImJ_G0034965.1 mouse_genomes_project 9 65452710 65466572 + MGP_129S1SvImJ_P0092881 protein_coding protein_coding MGP_129S1SvImJ_T0009360.1 MGP_129S1SvImJ_G0007520.1 mouse_genomes_project 9 122700378 122702539 - Gm2449 lincRNA lincRNA MGP_129S1SvImJ_T0018604.1 MGP_129S1SvImJ_G0015755.1 mouse_genomes_project 9 99867243 99868607 - 4930579K19Rik processed_transcript lincRNA MGP_129S1SvImJ_T0018605.1 MGP_129S1SvImJ_G0015755.1 mouse_genomes_project 9 99867474 99868626 - 4930579K19Rik processed_transcript TEC MGP_129S1SvImJ_T0018606.1 MGP_129S1SvImJ_G0015755.1 mouse_genomes_project 9 99867974 99868626 - 4930579K19Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0101454.1 MGP_129S1SvImJ_G0039521.1 mouse_genomes_project 9 43260794 43260929 - Gm24166 snoRNA snoRNA MGP_129S1SvImJ_T0094168.1 MGP_129S1SvImJ_G0035241.1 mouse_genomes_project 9 108459353 108464398 - MGP_129S1SvImJ_P0094168 Grm2 protein_coding protein_coding MGP_129S1SvImJ_T0094169.1 MGP_129S1SvImJ_G0035241.1 mouse_genomes_project 9 108459375 108472293 - MGP_129S1SvImJ_P0094169 Grm2 protein_coding protein_coding MGP_129S1SvImJ_T0094170.1 MGP_129S1SvImJ_G0035241.1 mouse_genomes_project 9 108461149 108472295 - MGP_129S1SvImJ_P0094170 Grm2 protein_coding protein_coding MGP_129S1SvImJ_T0094171.1 MGP_129S1SvImJ_G0035241.1 mouse_genomes_project 9 108461248 108462884 - Grm2 protein_coding processed_transcript MGP_129S1SvImJ_T0091837.1 MGP_129S1SvImJ_G0034610.1 mouse_genomes_project 9 36733981 36734959 - MGP_129S1SvImJ_P0091837 Olfr918 protein_coding protein_coding MGP_129S1SvImJ_T0101464.1 MGP_129S1SvImJ_G0039531.1 mouse_genomes_project 9 64572996 64573138 - Gm24347 snoRNA snoRNA MGP_129S1SvImJ_T0093246.1 MGP_129S1SvImJ_G0035041.1 mouse_genomes_project 9 75815888 75884592 - MGP_129S1SvImJ_P0093246 Tmod3 protein_coding protein_coding MGP_129S1SvImJ_T0093247.1 MGP_129S1SvImJ_G0035041.1 mouse_genomes_project 9 75818207 75839239 - MGP_129S1SvImJ_P0093247 Tmod3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0093233.1 MGP_129S1SvImJ_G0035035.1 mouse_genomes_project 9 75523777 75602025 + MGP_129S1SvImJ_P0093233 Myo5c protein_coding protein_coding MGP_129S1SvImJ_T0093234.1 MGP_129S1SvImJ_G0035035.1 mouse_genomes_project 9 75523912 75602035 + MGP_129S1SvImJ_P0093234 Myo5c protein_coding unknown_likely_coding MGP_129S1SvImJ_T0092076.1 MGP_129S1SvImJ_G0034718.1 mouse_genomes_project 9 43302523 43322205 + MGP_129S1SvImJ_P0092076 Ift46 protein_coding protein_coding MGP_129S1SvImJ_T0092077.1 MGP_129S1SvImJ_G0034718.1 mouse_genomes_project 9 43302548 43311586 + MGP_129S1SvImJ_P0092077 Ift46 protein_coding protein_coding MGP_129S1SvImJ_T0092078.1 MGP_129S1SvImJ_G0034718.1 mouse_genomes_project 9 43302639 43315775 + Ift46 protein_coding processed_transcript MGP_129S1SvImJ_T0092079.1 MGP_129S1SvImJ_G0034718.1 mouse_genomes_project 9 43302642 43304007 + Ift46 protein_coding processed_transcript MGP_129S1SvImJ_T0092080.1 MGP_129S1SvImJ_G0034718.1 mouse_genomes_project 9 43302688 43313499 + MGP_129S1SvImJ_P0092080 Ift46 protein_coding protein_coding MGP_129S1SvImJ_T0092081.1 MGP_129S1SvImJ_G0034718.1 mouse_genomes_project 9 43302851 43311578 + MGP_129S1SvImJ_P0092081 Ift46 protein_coding protein_coding MGP_129S1SvImJ_T0092082.1 MGP_129S1SvImJ_G0034718.1 mouse_genomes_project 9 43303288 43311647 + MGP_129S1SvImJ_P0092082 Ift46 protein_coding protein_coding MGP_129S1SvImJ_T0092083.1 MGP_129S1SvImJ_G0034718.1 mouse_genomes_project 9 43305987 43320387 + MGP_129S1SvImJ_P0092083 Ift46 protein_coding protein_coding MGP_129S1SvImJ_T0092084.1 MGP_129S1SvImJ_G0034718.1 mouse_genomes_project 9 43307367 43311656 + Ift46 protein_coding retained_intron MGP_129S1SvImJ_T0092085.1 MGP_129S1SvImJ_G0034718.1 mouse_genomes_project 9 43313752 43317055 + Ift46 protein_coding processed_transcript MGP_129S1SvImJ_T0092086.1 MGP_129S1SvImJ_G0034718.1 mouse_genomes_project 9 43318936 43320228 + Ift46 protein_coding retained_intron MGP_129S1SvImJ_T0095302.1 MGP_129S1SvImJ_G0035457.1 mouse_genomes_project 9 124947568 124964020 - MGP_129S1SvImJ_P0095302 Pomgnt2 protein_coding protein_coding MGP_129S1SvImJ_T0016043.1 MGP_129S1SvImJ_G0014132.1 mouse_genomes_project 9 33405791 33406061 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091320.1 MGP_129S1SvImJ_G0034418.1 mouse_genomes_project 9 17569256 17600450 - MGP_129S1SvImJ_P0091320 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091321.1 MGP_129S1SvImJ_G0034418.1 mouse_genomes_project 9 17573330 17600409 - protein_coding retained_intron MGP_129S1SvImJ_T0091322.1 MGP_129S1SvImJ_G0034418.1 mouse_genomes_project 9 17575361 17600441 - protein_coding retained_intron MGP_129S1SvImJ_T0091323.1 MGP_129S1SvImJ_G0034418.1 mouse_genomes_project 9 17576598 17579673 - protein_coding processed_transcript MGP_129S1SvImJ_T0091324.1 MGP_129S1SvImJ_G0034418.1 mouse_genomes_project 9 17580328 17600614 - protein_coding retained_intron MGP_129S1SvImJ_T0091325.1 MGP_129S1SvImJ_G0034418.1 mouse_genomes_project 9 17582616 17600279 - MGP_129S1SvImJ_P0091325 protein_coding protein_coding MGP_129S1SvImJ_T0092952.1 MGP_129S1SvImJ_G0034982.1 mouse_genomes_project 9 66723307 66798802 - MGP_129S1SvImJ_P0092952 Rab8b protein_coding protein_coding MGP_129S1SvImJ_T0101459.1 MGP_129S1SvImJ_G0039526.1 mouse_genomes_project 9 63820817 63820885 + Gm23344 snoRNA snoRNA MGP_129S1SvImJ_T0091278.1 MGP_129S1SvImJ_G0034377.1 mouse_genomes_project 9 15508570 15516523 + MGP_129S1SvImJ_P0091278 Mbd3l1 protein_coding protein_coding MGP_129S1SvImJ_T0094683.1 MGP_129S1SvImJ_G0035315.1 mouse_genomes_project 9 110844256 110845259 + Slc26a6 protein_coding processed_transcript MGP_129S1SvImJ_T0094684.1 MGP_129S1SvImJ_G0035315.1 mouse_genomes_project 9 110844321 110853119 + MGP_129S1SvImJ_P0094684 Slc26a6 protein_coding protein_coding MGP_129S1SvImJ_T0094685.1 MGP_129S1SvImJ_G0035315.1 mouse_genomes_project 9 110845011 110851804 + MGP_129S1SvImJ_P0094685 Slc26a6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094686.1 MGP_129S1SvImJ_G0035315.1 mouse_genomes_project 9 110845011 110855253 + MGP_129S1SvImJ_P0094686 Slc26a6 protein_coding protein_coding MGP_129S1SvImJ_T0094687.1 MGP_129S1SvImJ_G0035315.1 mouse_genomes_project 9 110845017 110853119 + MGP_129S1SvImJ_P0094687 Slc26a6 protein_coding protein_coding MGP_129S1SvImJ_T0094688.1 MGP_129S1SvImJ_G0035315.1 mouse_genomes_project 9 110845048 110853119 + Slc26a6 protein_coding retained_intron MGP_129S1SvImJ_T0094689.1 MGP_129S1SvImJ_G0035315.1 mouse_genomes_project 9 110845068 110853119 + Slc26a6 protein_coding retained_intron MGP_129S1SvImJ_T0094690.1 MGP_129S1SvImJ_G0035315.1 mouse_genomes_project 9 110845109 110853119 + MGP_129S1SvImJ_P0094690 Slc26a6 protein_coding protein_coding MGP_129S1SvImJ_T0094691.1 MGP_129S1SvImJ_G0035315.1 mouse_genomes_project 9 110845200 110855748 + MGP_129S1SvImJ_P0094691 Slc26a6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0094692.1 MGP_129S1SvImJ_G0035315.1 mouse_genomes_project 9 110846637 110853119 + MGP_129S1SvImJ_P0094692 Slc26a6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094693.1 MGP_129S1SvImJ_G0035315.1 mouse_genomes_project 9 110855104 110855744 + MGP_129S1SvImJ_P0094693 Slc26a6 protein_coding protein_coding MGP_129S1SvImJ_T0091308.1 MGP_129S1SvImJ_G0034407.1 mouse_genomes_project 9 17126485 17127562 - MGP_129S1SvImJ_P0091308 Olfr866 protein_coding protein_coding MGP_129S1SvImJ_T0002375.1 MGP_129S1SvImJ_G0002285.1 mouse_genomes_project 9 30291235 30293070 - TEC TEC MGP_129S1SvImJ_T0016073.1 MGP_129S1SvImJ_G0014162.1 mouse_genomes_project 9 72442413 72442858 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016099.1 MGP_129S1SvImJ_G0014188.1 mouse_genomes_project 9 83174183 83174511 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091534.1 MGP_129S1SvImJ_G0034494.1 mouse_genomes_project 9 21981248 21981891 + MGP_129S1SvImJ_P0091534 Cypt4 protein_coding protein_coding MGP_129S1SvImJ_T0100205.1 MGP_129S1SvImJ_G0038272.1 mouse_genomes_project 9 92866300 92866405 + Gm26101 snRNA snRNA MGP_129S1SvImJ_T0092317.1 MGP_129S1SvImJ_G0034793.1 mouse_genomes_project 9 49751602 49768028 + Ppp2r1b protein_coding processed_transcript MGP_129S1SvImJ_T0092318.1 MGP_129S1SvImJ_G0034793.1 mouse_genomes_project 9 49763192 49798650 + MGP_129S1SvImJ_P0092318 Ppp2r1b protein_coding protein_coding MGP_129S1SvImJ_T0092319.1 MGP_129S1SvImJ_G0034793.1 mouse_genomes_project 9 49763192 49800083 + MGP_129S1SvImJ_P0092319 Ppp2r1b protein_coding protein_coding MGP_129S1SvImJ_T0092320.1 MGP_129S1SvImJ_G0034793.1 mouse_genomes_project 9 49763205 49787265 + MGP_129S1SvImJ_P0092320 Ppp2r1b protein_coding protein_coding MGP_129S1SvImJ_T0092321.1 MGP_129S1SvImJ_G0034793.1 mouse_genomes_project 9 49763225 49785921 + MGP_129S1SvImJ_P0092321 Ppp2r1b protein_coding protein_coding MGP_129S1SvImJ_T0092322.1 MGP_129S1SvImJ_G0034793.1 mouse_genomes_project 9 49763231 49798657 + MGP_129S1SvImJ_P0092322 Ppp2r1b protein_coding protein_coding MGP_129S1SvImJ_T0092323.1 MGP_129S1SvImJ_G0034793.1 mouse_genomes_project 9 49763232 49798650 + MGP_129S1SvImJ_P0092323 Ppp2r1b protein_coding protein_coding MGP_129S1SvImJ_T0092324.1 MGP_129S1SvImJ_G0034793.1 mouse_genomes_project 9 49763234 49785767 + MGP_129S1SvImJ_P0092324 Ppp2r1b protein_coding protein_coding MGP_129S1SvImJ_T0092325.1 MGP_129S1SvImJ_G0034793.1 mouse_genomes_project 9 49763247 49786241 + MGP_129S1SvImJ_P0092325 Ppp2r1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092326.1 MGP_129S1SvImJ_G0034793.1 mouse_genomes_project 9 49776416 49785862 + MGP_129S1SvImJ_P0092326 Ppp2r1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092327.1 MGP_129S1SvImJ_G0034793.1 mouse_genomes_project 9 49779006 49783894 + Ppp2r1b protein_coding processed_transcript MGP_129S1SvImJ_T0092328.1 MGP_129S1SvImJ_G0034793.1 mouse_genomes_project 9 49783916 49784968 + Ppp2r1b protein_coding retained_intron MGP_129S1SvImJ_T0094967.1 MGP_129S1SvImJ_G0035367.1 mouse_genomes_project 9 113180105 113184900 - MGP_129S1SvImJ_P0094967 Rtp3 protein_coding protein_coding MGP_129S1SvImJ_T0094968.1 MGP_129S1SvImJ_G0035367.1 mouse_genomes_project 9 113182214 113185770 - MGP_129S1SvImJ_P0094968 Rtp3 protein_coding protein_coding MGP_129S1SvImJ_T0092535.1 MGP_129S1SvImJ_G0034862.1 mouse_genomes_project 9 56419991 56434843 + MGP_129S1SvImJ_P0092535 Trcg1 protein_coding protein_coding MGP_129S1SvImJ_T0002448.1 MGP_129S1SvImJ_G0002357.1 mouse_genomes_project 9 100687247 100687938 + TEC TEC MGP_129S1SvImJ_T0101482.1 MGP_129S1SvImJ_G0039549.1 mouse_genomes_project 9 89954718 89954787 + snoRNA snoRNA MGP_129S1SvImJ_T0092051.1 MGP_129S1SvImJ_G0034715.1 mouse_genomes_project 9 43196356 43210412 + MGP_129S1SvImJ_P0092051 Treh protein_coding protein_coding MGP_129S1SvImJ_T0092052.1 MGP_129S1SvImJ_G0034715.1 mouse_genomes_project 9 43196358 43210411 + MGP_129S1SvImJ_P0092052 Treh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092053.1 MGP_129S1SvImJ_G0034715.1 mouse_genomes_project 9 43196372 43210412 + MGP_129S1SvImJ_P0092053 Treh protein_coding protein_coding MGP_129S1SvImJ_T0092054.1 MGP_129S1SvImJ_G0034715.1 mouse_genomes_project 9 43207405 43210123 + MGP_129S1SvImJ_P0092054 Treh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092542.1 MGP_129S1SvImJ_G0034869.1 mouse_genomes_project 9 56758814 56767324 - MGP_129S1SvImJ_P0092542 Mpi protein_coding protein_coding MGP_129S1SvImJ_T0092543.1 MGP_129S1SvImJ_G0034869.1 mouse_genomes_project 9 56762824 56766827 - Mpi protein_coding retained_intron MGP_129S1SvImJ_T0092544.1 MGP_129S1SvImJ_G0034869.1 mouse_genomes_project 9 56763153 56764236 - Mpi protein_coding retained_intron MGP_129S1SvImJ_T0092545.1 MGP_129S1SvImJ_G0034869.1 mouse_genomes_project 9 56763693 56767270 - MGP_129S1SvImJ_P0092545 Mpi protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092546.1 MGP_129S1SvImJ_G0034869.1 mouse_genomes_project 9 56764538 56767277 - Mpi protein_coding retained_intron MGP_129S1SvImJ_T0094960.1 MGP_129S1SvImJ_G0035365.1 mouse_genomes_project 9 113136412 113143360 - MGP_129S1SvImJ_P0094960 Tdgf1 protein_coding protein_coding MGP_129S1SvImJ_T0094961.1 MGP_129S1SvImJ_G0035365.1 mouse_genomes_project 9 113137067 113143296 - MGP_129S1SvImJ_P0094961 Tdgf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094962.1 MGP_129S1SvImJ_G0035365.1 mouse_genomes_project 9 113139168 113143277 - MGP_129S1SvImJ_P0094962 Tdgf1 protein_coding protein_coding MGP_129S1SvImJ_T0094963.1 MGP_129S1SvImJ_G0035365.1 mouse_genomes_project 9 113139682 113142075 - MGP_129S1SvImJ_P0094963 Tdgf1 protein_coding protein_coding MGP_129S1SvImJ_T0091598.1 MGP_129S1SvImJ_G0034516.1 mouse_genomes_project 9 28744139 28789862 - MGP_129S1SvImJ_P0091598 St14 protein_coding protein_coding MGP_129S1SvImJ_T0091599.1 MGP_129S1SvImJ_G0034516.1 mouse_genomes_project 9 28754020 28789805 - St14 protein_coding retained_intron MGP_129S1SvImJ_T0091600.1 MGP_129S1SvImJ_G0034516.1 mouse_genomes_project 9 28754620 28758486 - St14 protein_coding retained_intron MGP_129S1SvImJ_T0091601.1 MGP_129S1SvImJ_G0034516.1 mouse_genomes_project 9 28762838 28789805 - MGP_129S1SvImJ_P0091601 St14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0009238.1 MGP_129S1SvImJ_G0007424.1 mouse_genomes_project 9 34568669 34594455 - 1700027I24Rik lincRNA lincRNA MGP_129S1SvImJ_T0100187.1 MGP_129S1SvImJ_G0038254.1 mouse_genomes_project 9 68395201 68395309 - Gm22169 snRNA snRNA MGP_129S1SvImJ_T0091802.1 MGP_129S1SvImJ_G0034576.1 mouse_genomes_project 9 35882777 35883713 + MGP_129S1SvImJ_P0091802 Olfr877 protein_coding protein_coding MGP_129S1SvImJ_T0005459.1 MGP_129S1SvImJ_G0004625.1 mouse_genomes_project 9 49373670 49397844 - Plet1os antisense antisense MGP_129S1SvImJ_T0005460.1 MGP_129S1SvImJ_G0004625.1 mouse_genomes_project 9 49373674 49394828 - Plet1os antisense antisense MGP_129S1SvImJ_T0091542.1 MGP_129S1SvImJ_G0034499.1 mouse_genomes_project 9 24173158 24200798 + MGP_129S1SvImJ_P0091542 B3gat1 protein_coding protein_coding MGP_129S1SvImJ_T0091543.1 MGP_129S1SvImJ_G0034499.1 mouse_genomes_project 9 24173233 24195512 + MGP_129S1SvImJ_P0091543 B3gat1 protein_coding protein_coding MGP_129S1SvImJ_T0091544.1 MGP_129S1SvImJ_G0034499.1 mouse_genomes_project 9 24173254 24202541 + MGP_129S1SvImJ_P0091544 B3gat1 protein_coding protein_coding MGP_129S1SvImJ_T0091545.1 MGP_129S1SvImJ_G0034499.1 mouse_genomes_project 9 24173281 24197415 + MGP_129S1SvImJ_P0091545 B3gat1 protein_coding protein_coding MGP_129S1SvImJ_T0091546.1 MGP_129S1SvImJ_G0034499.1 mouse_genomes_project 9 24190994 24200786 + MGP_129S1SvImJ_P0091546 B3gat1 protein_coding protein_coding MGP_129S1SvImJ_T0091547.1 MGP_129S1SvImJ_G0034499.1 mouse_genomes_project 9 24194716 24202547 + MGP_129S1SvImJ_P0091547 B3gat1 protein_coding protein_coding MGP_129S1SvImJ_T0093401.1 MGP_129S1SvImJ_G0035082.1 mouse_genomes_project 9 82496327 82853669 + MGP_129S1SvImJ_P0093401 Mei4 protein_coding protein_coding MGP_129S1SvImJ_T0093402.1 MGP_129S1SvImJ_G0035082.1 mouse_genomes_project 9 82496355 82667417 + MGP_129S1SvImJ_P0093402 Mei4 protein_coding protein_coding MGP_129S1SvImJ_T0005540.1 MGP_129S1SvImJ_G0004678.1 mouse_genomes_project 9 107926384 107938987 + D030055H07Rik antisense antisense MGP_129S1SvImJ_T0005541.1 MGP_129S1SvImJ_G0004678.1 mouse_genomes_project 9 107934227 107939033 + D030055H07Rik antisense antisense MGP_129S1SvImJ_T0005542.1 MGP_129S1SvImJ_G0004678.1 mouse_genomes_project 9 107935615 107939483 + D030055H07Rik antisense antisense MGP_129S1SvImJ_T0091887.1 MGP_129S1SvImJ_G0034648.1 mouse_genomes_project 9 37985904 37987400 + MGP_129S1SvImJ_P0091887 Olfr970 protein_coding protein_coding MGP_129S1SvImJ_T0002479.1 MGP_129S1SvImJ_G0002388.1 mouse_genomes_project 9 110126065 110126795 - TEC TEC MGP_129S1SvImJ_T0011119.1 MGP_129S1SvImJ_G0009235.1 mouse_genomes_project 9 110535660 110535780 - Gm24083 miRNA miRNA MGP_129S1SvImJ_T0011770.1 MGP_129S1SvImJ_G0009886.1 mouse_genomes_project 9 123678748 123679069 - Gm23624 misc_RNA misc_RNA MGP_129S1SvImJ_T0094862.1 MGP_129S1SvImJ_G0035344.1 mouse_genomes_project 9 112447038 112464925 + MGP_129S1SvImJ_P0094862 Elp6 protein_coding protein_coding MGP_129S1SvImJ_T0094863.1 MGP_129S1SvImJ_G0035344.1 mouse_genomes_project 9 112447069 112465704 + MGP_129S1SvImJ_P0094863 Elp6 protein_coding protein_coding MGP_129S1SvImJ_T0094864.1 MGP_129S1SvImJ_G0035344.1 mouse_genomes_project 9 112447105 112463174 + MGP_129S1SvImJ_P0094864 Elp6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094865.1 MGP_129S1SvImJ_G0035344.1 mouse_genomes_project 9 112447361 112458346 + MGP_129S1SvImJ_P0094865 Elp6 protein_coding protein_coding MGP_129S1SvImJ_T0094866.1 MGP_129S1SvImJ_G0035344.1 mouse_genomes_project 9 112452216 112456566 + Elp6 protein_coding retained_intron MGP_129S1SvImJ_T0092191.1 MGP_129S1SvImJ_G0034752.1 mouse_genomes_project 9 44905545 44913835 + MGP_129S1SvImJ_P0092191 Zpr1 protein_coding protein_coding MGP_129S1SvImJ_T0092192.1 MGP_129S1SvImJ_G0034752.1 mouse_genomes_project 9 44905545 44913518 + MGP_129S1SvImJ_P0092192 Zpr1 protein_coding protein_coding MGP_129S1SvImJ_T0092193.1 MGP_129S1SvImJ_G0034752.1 mouse_genomes_project 9 44905637 44908138 + MGP_129S1SvImJ_P0092193 Zpr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092194.1 MGP_129S1SvImJ_G0034752.1 mouse_genomes_project 9 44905980 44909086 + Zpr1 protein_coding retained_intron MGP_129S1SvImJ_T0092195.1 MGP_129S1SvImJ_G0034752.1 mouse_genomes_project 9 44907805 44908958 + Zpr1 protein_coding retained_intron MGP_129S1SvImJ_T0092196.1 MGP_129S1SvImJ_G0034752.1 mouse_genomes_project 9 44908482 44910005 + Zpr1 protein_coding retained_intron MGP_129S1SvImJ_T0094507.1 MGP_129S1SvImJ_G0035290.1 mouse_genomes_project 9 110242195 110246943 + Amt protein_coding processed_transcript MGP_129S1SvImJ_T0094508.1 MGP_129S1SvImJ_G0035290.1 mouse_genomes_project 9 110242212 110247663 + MGP_129S1SvImJ_P0094508 Amt protein_coding protein_coding MGP_129S1SvImJ_T0094509.1 MGP_129S1SvImJ_G0035290.1 mouse_genomes_project 9 110242252 110242874 + Amt protein_coding retained_intron MGP_129S1SvImJ_T0094510.1 MGP_129S1SvImJ_G0035290.1 mouse_genomes_project 9 110242264 110244786 + Amt protein_coding retained_intron MGP_129S1SvImJ_T0101487.1 MGP_129S1SvImJ_G0039554.1 mouse_genomes_project 9 101336386 101336520 + Gm23594 snoRNA snoRNA MGP_129S1SvImJ_T0093039.1 MGP_129S1SvImJ_G0034998.1 mouse_genomes_project 9 70258611 70471841 + MGP_129S1SvImJ_P0093039 Myo1e protein_coding protein_coding MGP_129S1SvImJ_T0091925.1 MGP_129S1SvImJ_G0034669.1 mouse_genomes_project 9 38911749 38995461 + Clmp protein_coding processed_transcript MGP_129S1SvImJ_T0091926.1 MGP_129S1SvImJ_G0034669.1 mouse_genomes_project 9 38911800 39020222 + MGP_129S1SvImJ_P0091926 Clmp protein_coding protein_coding MGP_129S1SvImJ_T0091927.1 MGP_129S1SvImJ_G0034669.1 mouse_genomes_project 9 38911823 38995584 + Clmp protein_coding retained_intron MGP_129S1SvImJ_T0091928.1 MGP_129S1SvImJ_G0034669.1 mouse_genomes_project 9 39009412 39017380 + Clmp protein_coding processed_transcript MGP_129S1SvImJ_T0091474.1 MGP_129S1SvImJ_G0034468.1 mouse_genomes_project 9 19209363 19223842 + MGP_129S1SvImJ_P0091474 Plppr2 protein_coding protein_coding MGP_129S1SvImJ_T0091475.1 MGP_129S1SvImJ_G0034468.1 mouse_genomes_project 9 19211320 19222948 + MGP_129S1SvImJ_P0091475 Plppr2 protein_coding protein_coding MGP_129S1SvImJ_T0093353.1 MGP_129S1SvImJ_G0035073.1 mouse_genomes_project 9 79136784 79238876 + MGP_129S1SvImJ_P0093353 Cd109 protein_coding protein_coding MGP_129S1SvImJ_T0093354.1 MGP_129S1SvImJ_G0035073.1 mouse_genomes_project 9 79137001 79139327 + Cd109 protein_coding processed_transcript MGP_129S1SvImJ_T0094117.1 MGP_129S1SvImJ_G0035230.1 mouse_genomes_project 9 108248638 108256047 - MGP_129S1SvImJ_P0094117 Abhd14a protein_coding protein_coding MGP_129S1SvImJ_T0094118.1 MGP_129S1SvImJ_G0035230.1 mouse_genomes_project 9 108248641 108256047 - MGP_129S1SvImJ_P0094118 Abhd14a protein_coding protein_coding MGP_129S1SvImJ_T0094119.1 MGP_129S1SvImJ_G0035230.1 mouse_genomes_project 9 108248643 108255932 - MGP_129S1SvImJ_P0094119 Abhd14a protein_coding protein_coding MGP_129S1SvImJ_T0094120.1 MGP_129S1SvImJ_G0035230.1 mouse_genomes_project 9 108248697 108255812 - MGP_129S1SvImJ_P0094120 Abhd14a protein_coding protein_coding MGP_129S1SvImJ_T0094121.1 MGP_129S1SvImJ_G0035230.1 mouse_genomes_project 9 108248969 108253361 - MGP_129S1SvImJ_P0094121 Abhd14a protein_coding protein_coding MGP_129S1SvImJ_T0094122.1 MGP_129S1SvImJ_G0035230.1 mouse_genomes_project 9 108249274 108255989 - MGP_129S1SvImJ_P0094122 Abhd14a protein_coding protein_coding MGP_129S1SvImJ_T0094123.1 MGP_129S1SvImJ_G0035230.1 mouse_genomes_project 9 108249354 108255886 - MGP_129S1SvImJ_P0094123 Abhd14a protein_coding protein_coding MGP_129S1SvImJ_T0094124.1 MGP_129S1SvImJ_G0035230.1 mouse_genomes_project 9 108251948 108252666 - Abhd14a protein_coding retained_intron MGP_129S1SvImJ_T0092133.1 MGP_129S1SvImJ_G0034736.1 mouse_genomes_project 9 43870201 43900345 + MGP_129S1SvImJ_P0092133 Tmprss13 protein_coding protein_coding MGP_129S1SvImJ_T0095327.1 MGP_129S1SvImJ_G0035466.1 mouse_genomes_project 9 125931342 125939295 + MGP_129S1SvImJ_P0095327 Zfp105 protein_coding protein_coding MGP_129S1SvImJ_T0095328.1 MGP_129S1SvImJ_G0035466.1 mouse_genomes_project 9 125931369 125937945 + MGP_129S1SvImJ_P0095328 Zfp105 protein_coding protein_coding MGP_129S1SvImJ_T0094013.1 MGP_129S1SvImJ_G0035211.1 mouse_genomes_project 9 106847636 106850035 - MGP_129S1SvImJ_P0094013 Nudt16 protein_coding protein_coding MGP_129S1SvImJ_T0094014.1 MGP_129S1SvImJ_G0035211.1 mouse_genomes_project 9 106848065 106850528 - MGP_129S1SvImJ_P0094014 Nudt16 protein_coding protein_coding MGP_129S1SvImJ_T0094015.1 MGP_129S1SvImJ_G0035211.1 mouse_genomes_project 9 106848395 106850503 - Nudt16 protein_coding retained_intron MGP_129S1SvImJ_T0094016.1 MGP_129S1SvImJ_G0035211.1 mouse_genomes_project 9 106848395 106850503 - Nudt16 protein_coding retained_intron MGP_129S1SvImJ_T0094017.1 MGP_129S1SvImJ_G0035211.1 mouse_genomes_project 9 106848929 106850496 - MGP_129S1SvImJ_P0094017 Nudt16 protein_coding protein_coding MGP_129S1SvImJ_T0095132.1 MGP_129S1SvImJ_G0035407.1 mouse_genomes_project 9 121293036 121615988 + MGP_129S1SvImJ_P0095132 Itga9 protein_coding protein_coding MGP_129S1SvImJ_T0095133.1 MGP_129S1SvImJ_G0035407.1 mouse_genomes_project 9 121375833 121517402 + Itga9 protein_coding processed_transcript MGP_129S1SvImJ_T0095134.1 MGP_129S1SvImJ_G0035407.1 mouse_genomes_project 9 121406821 121612691 + MGP_129S1SvImJ_P0095134 Itga9 protein_coding protein_coding MGP_129S1SvImJ_T0095135.1 MGP_129S1SvImJ_G0035407.1 mouse_genomes_project 9 121517454 121556263 + MGP_129S1SvImJ_P0095135 Itga9 protein_coding protein_coding MGP_129S1SvImJ_T0095136.1 MGP_129S1SvImJ_G0035407.1 mouse_genomes_project 9 121552042 121587073 + Itga9 protein_coding processed_transcript MGP_129S1SvImJ_T0095137.1 MGP_129S1SvImJ_G0035407.1 mouse_genomes_project 9 121587201 121612280 + Itga9 protein_coding processed_transcript MGP_129S1SvImJ_T0092091.1 MGP_129S1SvImJ_G0034721.1 mouse_genomes_project 9 43332855 43412519 - MGP_129S1SvImJ_P0092091 Kmt2a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0092092.1 MGP_129S1SvImJ_G0034721.1 mouse_genomes_project 9 43332856 43412541 - MGP_129S1SvImJ_P0092092 Kmt2a protein_coding protein_coding MGP_129S1SvImJ_T0092093.1 MGP_129S1SvImJ_G0034721.1 mouse_genomes_project 9 43332856 43412519 - MGP_129S1SvImJ_P0092093 Kmt2a protein_coding protein_coding MGP_129S1SvImJ_T0092094.1 MGP_129S1SvImJ_G0034721.1 mouse_genomes_project 9 43344078 43349520 - MGP_129S1SvImJ_P0092094 Kmt2a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092095.1 MGP_129S1SvImJ_G0034721.1 mouse_genomes_project 9 43352139 43377838 - MGP_129S1SvImJ_P0092095 Kmt2a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092096.1 MGP_129S1SvImJ_G0034721.1 mouse_genomes_project 9 43371235 43412541 - MGP_129S1SvImJ_P0092096 Kmt2a protein_coding protein_coding MGP_129S1SvImJ_T0092690.1 MGP_129S1SvImJ_G0034910.1 mouse_genomes_project 9 59988093 60110475 - MGP_129S1SvImJ_P0092690 Lrrc49 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092691.1 MGP_129S1SvImJ_G0034910.1 mouse_genomes_project 9 60008072 60109790 - MGP_129S1SvImJ_P0092691 Lrrc49 protein_coding protein_coding MGP_129S1SvImJ_T0092692.1 MGP_129S1SvImJ_G0034910.1 mouse_genomes_project 9 60008072 60110469 - MGP_129S1SvImJ_P0092692 Lrrc49 protein_coding protein_coding MGP_129S1SvImJ_T0092693.1 MGP_129S1SvImJ_G0034910.1 mouse_genomes_project 9 60008074 60110509 - MGP_129S1SvImJ_P0092693 Lrrc49 protein_coding protein_coding MGP_129S1SvImJ_T0092694.1 MGP_129S1SvImJ_G0034910.1 mouse_genomes_project 9 60008084 60109884 - MGP_129S1SvImJ_P0092694 Lrrc49 protein_coding protein_coding MGP_129S1SvImJ_T0092695.1 MGP_129S1SvImJ_G0034910.1 mouse_genomes_project 9 60008663 60019296 - Lrrc49 protein_coding retained_intron MGP_129S1SvImJ_T0092696.1 MGP_129S1SvImJ_G0034910.1 mouse_genomes_project 9 60030421 60110253 - Lrrc49 protein_coding retained_intron MGP_129S1SvImJ_T0092697.1 MGP_129S1SvImJ_G0034910.1 mouse_genomes_project 9 60030975 60071448 - Lrrc49 protein_coding processed_transcript MGP_129S1SvImJ_T0092698.1 MGP_129S1SvImJ_G0034910.1 mouse_genomes_project 9 60102926 60110022 - MGP_129S1SvImJ_P0092698 Lrrc49 protein_coding protein_coding MGP_129S1SvImJ_T0094161.1 MGP_129S1SvImJ_G0035238.1 mouse_genomes_project 9 108328825 108330265 + MGP_129S1SvImJ_P0094161 Iqcf5 protein_coding protein_coding MGP_129S1SvImJ_T0095074.1 MGP_129S1SvImJ_G0035383.1 mouse_genomes_project 9 116455747 116504235 + MGP_129S1SvImJ_P0095074 Susd5 protein_coding protein_coding MGP_129S1SvImJ_T0092659.1 MGP_129S1SvImJ_G0034905.1 mouse_genomes_project 9 59044330 59082266 + MGP_129S1SvImJ_P0092659 Gramd2 protein_coding protein_coding MGP_129S1SvImJ_T0092660.1 MGP_129S1SvImJ_G0034905.1 mouse_genomes_project 9 59075979 59086906 + MGP_129S1SvImJ_P0092660 Gramd2 protein_coding protein_coding MGP_129S1SvImJ_T0092661.1 MGP_129S1SvImJ_G0034905.1 mouse_genomes_project 9 59076106 59084767 + MGP_129S1SvImJ_P0092661 Gramd2 protein_coding protein_coding MGP_129S1SvImJ_T0092662.1 MGP_129S1SvImJ_G0034905.1 mouse_genomes_project 9 59078499 59082184 + Gramd2 protein_coding retained_intron MGP_129S1SvImJ_T0092663.1 MGP_129S1SvImJ_G0034905.1 mouse_genomes_project 9 59079523 59084657 + MGP_129S1SvImJ_P0092663 Gramd2 protein_coding protein_coding MGP_129S1SvImJ_T0092664.1 MGP_129S1SvImJ_G0034905.1 mouse_genomes_project 9 59082458 59086906 + Gramd2 protein_coding retained_intron MGP_129S1SvImJ_T0094609.1 MGP_129S1SvImJ_G0035304.1 mouse_genomes_project 9 110527646 110532950 + MGP_129S1SvImJ_P0094609 Impdh2 protein_coding protein_coding MGP_129S1SvImJ_T0094610.1 MGP_129S1SvImJ_G0035304.1 mouse_genomes_project 9 110527799 110530702 + MGP_129S1SvImJ_P0094610 Impdh2 protein_coding protein_coding MGP_129S1SvImJ_T0094611.1 MGP_129S1SvImJ_G0035304.1 mouse_genomes_project 9 110527830 110529064 + Impdh2 protein_coding retained_intron MGP_129S1SvImJ_T0094612.1 MGP_129S1SvImJ_G0035304.1 mouse_genomes_project 9 110527840 110529738 + Impdh2 protein_coding retained_intron MGP_129S1SvImJ_T0094613.1 MGP_129S1SvImJ_G0035304.1 mouse_genomes_project 9 110530500 110532760 + MGP_129S1SvImJ_P0094613 Impdh2 protein_coding protein_coding MGP_129S1SvImJ_T0094614.1 MGP_129S1SvImJ_G0035304.1 mouse_genomes_project 9 110530634 110531536 + Impdh2 protein_coding retained_intron MGP_129S1SvImJ_T0094615.1 MGP_129S1SvImJ_G0035304.1 mouse_genomes_project 9 110532565 110532935 + Impdh2 protein_coding retained_intron MGP_129S1SvImJ_T0094616.1 MGP_129S1SvImJ_G0035304.1 mouse_genomes_project 9 110532569 110532930 + Impdh2 protein_coding retained_intron MGP_129S1SvImJ_T0009310.1 MGP_129S1SvImJ_G0007482.1 mouse_genomes_project 9 93954390 93974285 + Gm28054 lincRNA lincRNA MGP_129S1SvImJ_T0100215.1 MGP_129S1SvImJ_G0038282.1 mouse_genomes_project 9 109818872 109818971 + Gm23856 snRNA snRNA MGP_129S1SvImJ_T0016111.1 MGP_129S1SvImJ_G0014200.1 mouse_genomes_project 9 88988673 88990144 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0092763.1 MGP_129S1SvImJ_G0034929.1 mouse_genomes_project 9 62988404 62992785 - 2300009A05Rik protein_coding processed_transcript MGP_129S1SvImJ_T0092764.1 MGP_129S1SvImJ_G0034929.1 mouse_genomes_project 9 62988404 62993199 - MGP_129S1SvImJ_P0092764 2300009A05Rik protein_coding protein_coding MGP_129S1SvImJ_T0092765.1 MGP_129S1SvImJ_G0034929.1 mouse_genomes_project 9 62988405 62992785 - 2300009A05Rik protein_coding processed_transcript MGP_129S1SvImJ_T0092766.1 MGP_129S1SvImJ_G0034929.1 mouse_genomes_project 9 62991433 62993204 - 2300009A05Rik protein_coding retained_intron MGP_129S1SvImJ_T0018532.1 MGP_129S1SvImJ_G0015731.1 mouse_genomes_project 9 18417690 18418728 + Gm16754 processed_transcript retained_intron MGP_129S1SvImJ_T0018533.1 MGP_129S1SvImJ_G0015731.1 mouse_genomes_project 9 18417690 18426120 + Gm16754 processed_transcript antisense MGP_129S1SvImJ_T0018534.1 MGP_129S1SvImJ_G0015731.1 mouse_genomes_project 9 18417722 18426527 + Gm16754 processed_transcript antisense MGP_129S1SvImJ_T0092235.1 MGP_129S1SvImJ_G0034768.1 mouse_genomes_project 9 47870122 47897952 + MGP_129S1SvImJ_P0092235 Zw10 protein_coding protein_coding MGP_129S1SvImJ_T0009350.1 MGP_129S1SvImJ_G0007513.1 mouse_genomes_project 9 114504199 114504863 + 2310075C17Rik lincRNA lincRNA MGP_129S1SvImJ_T0011099.1 MGP_129S1SvImJ_G0009215.1 mouse_genomes_project 9 67637986 67638050 - Mir7241 miRNA miRNA MGP_129S1SvImJ_T0094412.1 MGP_129S1SvImJ_G0035276.1 mouse_genomes_project 9 109890439 109891006 + Uba7 protein_coding processed_transcript MGP_129S1SvImJ_T0094413.1 MGP_129S1SvImJ_G0035276.1 mouse_genomes_project 9 109890468 109898992 + MGP_129S1SvImJ_P0094413 Uba7 protein_coding protein_coding MGP_129S1SvImJ_T0094414.1 MGP_129S1SvImJ_G0035276.1 mouse_genomes_project 9 109890504 109898992 + Uba7 protein_coding retained_intron MGP_129S1SvImJ_T0094415.1 MGP_129S1SvImJ_G0035276.1 mouse_genomes_project 9 109890509 109898992 + Uba7 protein_coding retained_intron MGP_129S1SvImJ_T0094416.1 MGP_129S1SvImJ_G0035276.1 mouse_genomes_project 9 109890516 109895434 + Uba7 protein_coding retained_intron MGP_129S1SvImJ_T0094417.1 MGP_129S1SvImJ_G0035276.1 mouse_genomes_project 9 109890540 109891085 + Uba7 protein_coding processed_transcript MGP_129S1SvImJ_T0094418.1 MGP_129S1SvImJ_G0035276.1 mouse_genomes_project 9 109890540 109898992 + Uba7 protein_coding retained_intron MGP_129S1SvImJ_T0094419.1 MGP_129S1SvImJ_G0035276.1 mouse_genomes_project 9 109890589 109898994 + MGP_129S1SvImJ_P0094419 Uba7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094420.1 MGP_129S1SvImJ_G0035276.1 mouse_genomes_project 9 109890890 109898996 + MGP_129S1SvImJ_P0094420 Uba7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094421.1 MGP_129S1SvImJ_G0035276.1 mouse_genomes_project 9 109891242 109891901 + Uba7 protein_coding retained_intron MGP_129S1SvImJ_T0094422.1 MGP_129S1SvImJ_G0035276.1 mouse_genomes_project 9 109891825 109892459 + Uba7 protein_coding retained_intron MGP_129S1SvImJ_T0094423.1 MGP_129S1SvImJ_G0035276.1 mouse_genomes_project 9 109894673 109897720 + Uba7 protein_coding retained_intron MGP_129S1SvImJ_T0094424.1 MGP_129S1SvImJ_G0035276.1 mouse_genomes_project 9 109895824 109898135 + Uba7 protein_coding retained_intron MGP_129S1SvImJ_T0094425.1 MGP_129S1SvImJ_G0035276.1 mouse_genomes_project 9 109897960 109898989 + Uba7 protein_coding retained_intron MGP_129S1SvImJ_T0094426.1 MGP_129S1SvImJ_G0035276.1 mouse_genomes_project 9 109897970 109898887 + Uba7 protein_coding retained_intron MGP_129S1SvImJ_T0091503.1 MGP_129S1SvImJ_G0034483.1 mouse_genomes_project 9 19544950 19557539 - MGP_129S1SvImJ_P0091503 Zfp599 protein_coding protein_coding MGP_129S1SvImJ_T0011089.1 MGP_129S1SvImJ_G0009205.1 mouse_genomes_project 9 51091985 51092102 + Mir6244 miRNA miRNA MGP_129S1SvImJ_T0005529.1 MGP_129S1SvImJ_G0004668.1 mouse_genomes_project 9 98604703 98626540 + Gm15891 antisense antisense MGP_129S1SvImJ_T0011112.1 MGP_129S1SvImJ_G0009228.1 mouse_genomes_project 9 106095410 106095485 + Mir2136 miRNA miRNA MGP_129S1SvImJ_T0091492.1 MGP_129S1SvImJ_G0034477.1 mouse_genomes_project 9 19389165 19399895 + MGP_129S1SvImJ_P0091492 Cnn1 protein_coding protein_coding MGP_129S1SvImJ_T0005550.1 MGP_129S1SvImJ_G0004684.1 mouse_genomes_project 9 109157280 109158739 - Gm17041 antisense antisense MGP_129S1SvImJ_T0002398.1 MGP_129S1SvImJ_G0002308.1 mouse_genomes_project 9 72763999 72766027 + TEC TEC MGP_129S1SvImJ_T0093248.1 MGP_129S1SvImJ_G0035042.1 mouse_genomes_project 9 75893338 75939011 - MGP_129S1SvImJ_P0093248 Tmod2 protein_coding protein_coding MGP_129S1SvImJ_T0093249.1 MGP_129S1SvImJ_G0035042.1 mouse_genomes_project 9 75893338 75926776 - MGP_129S1SvImJ_P0093249 Tmod2 protein_coding protein_coding MGP_129S1SvImJ_T0093250.1 MGP_129S1SvImJ_G0035042.1 mouse_genomes_project 9 75901433 75925295 - MGP_129S1SvImJ_P0093250 Tmod2 protein_coding protein_coding MGP_129S1SvImJ_T0092919.1 MGP_129S1SvImJ_G0034973.1 mouse_genomes_project 9 65931341 65944538 + MGP_129S1SvImJ_P0092919 Fam96a protein_coding protein_coding MGP_129S1SvImJ_T0100211.1 MGP_129S1SvImJ_G0038278.1 mouse_genomes_project 9 107407061 107407148 - Gm22720 snRNA snRNA MGP_129S1SvImJ_T0005569.1 MGP_129S1SvImJ_G0004700.1 mouse_genomes_project 9 112835875 112841441 - Gm42762 antisense antisense MGP_129S1SvImJ_T0091385.1 MGP_129S1SvImJ_G0034436.1 mouse_genomes_project 9 18210528 18211687 + MGP_129S1SvImJ_P0091385 Icam4 protein_coding protein_coding MGP_129S1SvImJ_T0092176.1 MGP_129S1SvImJ_G0034747.1 mouse_genomes_project 9 44623490 44854245 + MGP_129S1SvImJ_P0092176 Sik3 protein_coding protein_coding MGP_129S1SvImJ_T0092177.1 MGP_129S1SvImJ_G0034747.1 mouse_genomes_project 9 44625734 44852326 + MGP_129S1SvImJ_P0092177 Sik3 protein_coding protein_coding MGP_129S1SvImJ_T0092178.1 MGP_129S1SvImJ_G0034747.1 mouse_genomes_project 9 44625870 44851285 + MGP_129S1SvImJ_P0092178 Sik3 protein_coding protein_coding MGP_129S1SvImJ_T0092179.1 MGP_129S1SvImJ_G0034747.1 mouse_genomes_project 9 44625902 44831739 + MGP_129S1SvImJ_P0092179 Sik3 protein_coding protein_coding MGP_129S1SvImJ_T0092180.1 MGP_129S1SvImJ_G0034747.1 mouse_genomes_project 9 44781228 44854239 + Sik3 protein_coding processed_transcript MGP_129S1SvImJ_T0092181.1 MGP_129S1SvImJ_G0034747.1 mouse_genomes_project 9 44849621 44851285 + MGP_129S1SvImJ_P0092181 Sik3 protein_coding protein_coding MGP_129S1SvImJ_T0095403.1 MGP_129S1SvImJ_G0035493.1 mouse_genomes_project 9 127250057 127255621 + MGP_129S1SvImJ_P0095403 Ccr5 protein_coding protein_coding MGP_129S1SvImJ_T0095404.1 MGP_129S1SvImJ_G0035493.1 mouse_genomes_project 9 127250087 127253710 + Ccr5 protein_coding processed_transcript MGP_129S1SvImJ_T0095405.1 MGP_129S1SvImJ_G0035493.1 mouse_genomes_project 9 127250087 127260327 + MGP_129S1SvImJ_P0095405 Ccr5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095406.1 MGP_129S1SvImJ_G0035493.1 mouse_genomes_project 9 127250095 127253174 + MGP_129S1SvImJ_P0095406 Ccr5 protein_coding protein_coding MGP_129S1SvImJ_T0095407.1 MGP_129S1SvImJ_G0035493.1 mouse_genomes_project 9 127255123 127258686 + Ccr5 protein_coding processed_transcript MGP_129S1SvImJ_T0005558.1 MGP_129S1SvImJ_G0004689.1 mouse_genomes_project 9 109456298 109472228 - Gm16343 antisense antisense MGP_129S1SvImJ_T0092386.1 MGP_129S1SvImJ_G0034815.1 mouse_genomes_project 9 52723662 52747035 - MGP_129S1SvImJ_P0092386 Rab39 protein_coding protein_coding MGP_129S1SvImJ_T0092342.1 MGP_129S1SvImJ_G0034800.1 mouse_genomes_project 9 50213108 50257989 - MGP_129S1SvImJ_P0092342 1810046K07Rik protein_coding protein_coding MGP_129S1SvImJ_T0092343.1 MGP_129S1SvImJ_G0034800.1 mouse_genomes_project 9 50213866 50238728 - MGP_129S1SvImJ_P0092343 1810046K07Rik protein_coding protein_coding MGP_129S1SvImJ_T0095229.1 MGP_129S1SvImJ_G0035437.1 mouse_genomes_project 9 123435180 123439592 + MGP_129S1SvImJ_P0095229 Rpl14 protein_coding protein_coding MGP_129S1SvImJ_T0100166.1 MGP_129S1SvImJ_G0038233.1 mouse_genomes_project 9 39608099 39608205 - Gm25401 snRNA snRNA MGP_129S1SvImJ_T0091771.1 MGP_129S1SvImJ_G0034563.1 mouse_genomes_project 9 35377628 35389729 + Robo4 protein_coding retained_intron MGP_129S1SvImJ_T0091772.1 MGP_129S1SvImJ_G0034563.1 mouse_genomes_project 9 35377628 35389733 + MGP_129S1SvImJ_P0091772 Robo4 protein_coding protein_coding MGP_129S1SvImJ_T0091773.1 MGP_129S1SvImJ_G0034563.1 mouse_genomes_project 9 35377764 35389731 + MGP_129S1SvImJ_P0091773 Robo4 protein_coding protein_coding MGP_129S1SvImJ_T0091774.1 MGP_129S1SvImJ_G0034563.1 mouse_genomes_project 9 35377777 35389732 + MGP_129S1SvImJ_P0091774 Robo4 protein_coding protein_coding MGP_129S1SvImJ_T0002449.1 MGP_129S1SvImJ_G0002358.1 mouse_genomes_project 9 101589287 101590442 - TEC TEC MGP_129S1SvImJ_T0016108.1 MGP_129S1SvImJ_G0014197.1 mouse_genomes_project 9 88264606 88265084 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011756.1 MGP_129S1SvImJ_G0009872.1 mouse_genomes_project 9 42854473 42854750 + Gm22141 misc_RNA misc_RNA MGP_129S1SvImJ_T0092732.1 MGP_129S1SvImJ_G0034920.1 mouse_genomes_project 9 61876222 61916533 + Anp32a protein_coding processed_transcript MGP_129S1SvImJ_T0092733.1 MGP_129S1SvImJ_G0034920.1 mouse_genomes_project 9 61876258 61918444 + MGP_129S1SvImJ_P0092733 Anp32a protein_coding protein_coding MGP_129S1SvImJ_T0092734.1 MGP_129S1SvImJ_G0034920.1 mouse_genomes_project 9 61876830 61913584 + MGP_129S1SvImJ_P0092734 Anp32a protein_coding protein_coding MGP_129S1SvImJ_T0092735.1 MGP_129S1SvImJ_G0034920.1 mouse_genomes_project 9 61877003 61916504 + MGP_129S1SvImJ_P0092735 Anp32a protein_coding protein_coding MGP_129S1SvImJ_T0092736.1 MGP_129S1SvImJ_G0034920.1 mouse_genomes_project 9 61877392 61912449 + MGP_129S1SvImJ_P0092736 Anp32a protein_coding protein_coding MGP_129S1SvImJ_T0092737.1 MGP_129S1SvImJ_G0034920.1 mouse_genomes_project 9 61878991 61912462 + Anp32a protein_coding processed_transcript MGP_129S1SvImJ_T0092738.1 MGP_129S1SvImJ_G0034920.1 mouse_genomes_project 9 61879722 61913581 + Anp32a protein_coding processed_transcript MGP_129S1SvImJ_T0092739.1 MGP_129S1SvImJ_G0034920.1 mouse_genomes_project 9 61903150 61912542 + Anp32a protein_coding processed_transcript MGP_129S1SvImJ_T0092740.1 MGP_129S1SvImJ_G0034920.1 mouse_genomes_project 9 61903156 61916139 + Anp32a protein_coding processed_transcript MGP_129S1SvImJ_T0092741.1 MGP_129S1SvImJ_G0034920.1 mouse_genomes_project 9 61912304 61917412 + Anp32a protein_coding retained_intron MGP_129S1SvImJ_T0091228.1 MGP_129S1SvImJ_G0034360.1 mouse_genomes_project 9 12016971 12091558 - MGP_129S1SvImJ_P0091228 Hephl1 protein_coding protein_coding MGP_129S1SvImJ_T0009296.1 MGP_129S1SvImJ_G0007471.1 mouse_genomes_project 9 85500380 85514599 + 4930554C24Rik lincRNA lincRNA MGP_129S1SvImJ_T0091904.1 MGP_129S1SvImJ_G0034665.1 mouse_genomes_project 9 38390995 38415088 + MGP_129S1SvImJ_P0091904 Zfp202 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091905.1 MGP_129S1SvImJ_G0034665.1 mouse_genomes_project 9 38391059 38413353 + MGP_129S1SvImJ_P0091905 Zfp202 protein_coding protein_coding MGP_129S1SvImJ_T0101434.1 MGP_129S1SvImJ_G0039501.1 mouse_genomes_project 9 12299782 12299915 + snoRNA snoRNA MGP_129S1SvImJ_T0101495.1 MGP_129S1SvImJ_G0039562.1 mouse_genomes_project 9 110786211 110786358 - Gm23034 snoRNA snoRNA MGP_129S1SvImJ_T0100209.1 MGP_129S1SvImJ_G0038276.1 mouse_genomes_project 9 103936216 103936319 + Gm22894 snRNA snRNA MGP_129S1SvImJ_T0092803.1 MGP_129S1SvImJ_G0034938.1 mouse_genomes_project 9 63831704 63909630 - MGP_129S1SvImJ_P0092803 Map2k1 protein_coding protein_coding MGP_129S1SvImJ_T0092804.1 MGP_129S1SvImJ_G0034938.1 mouse_genomes_project 9 63832463 63833799 - Map2k1 protein_coding retained_intron MGP_129S1SvImJ_T0092805.1 MGP_129S1SvImJ_G0034938.1 mouse_genomes_project 9 63832671 63834191 - Map2k1 protein_coding retained_intron MGP_129S1SvImJ_T0092806.1 MGP_129S1SvImJ_G0034938.1 mouse_genomes_project 9 63833223 63841618 - Map2k1 protein_coding processed_transcript MGP_129S1SvImJ_T0092807.1 MGP_129S1SvImJ_G0034939.1 mouse_genomes_project 9 63891100 63893540 + MGP_129S1SvImJ_P0092807 Uchl4 protein_coding protein_coding MGP_129S1SvImJ_T0095301.1 MGP_129S1SvImJ_G0035456.1 mouse_genomes_project 9 124918366 124946171 + MGP_129S1SvImJ_P0095301 Fam198a protein_coding protein_coding MGP_129S1SvImJ_T0091891.1 MGP_129S1SvImJ_G0034652.1 mouse_genomes_project 9 38110235 38111315 + MGP_129S1SvImJ_P0091891 Olfr974 protein_coding protein_coding MGP_129S1SvImJ_T0098668.1 MGP_129S1SvImJ_G0036753.1 mouse_genomes_project 9 97695035 97695117 - Gm27289 rRNA rRNA MGP_129S1SvImJ_T0002444.1 MGP_129S1SvImJ_G0002353.1 mouse_genomes_project 9 99794419 99795599 + TEC TEC MGP_129S1SvImJ_T0092105.1 MGP_129S1SvImJ_G0034724.1 mouse_genomes_project 9 43503273 43515331 - MGP_129S1SvImJ_P0092105 Cd3g protein_coding protein_coding MGP_129S1SvImJ_T0092106.1 MGP_129S1SvImJ_G0034724.1 mouse_genomes_project 9 43503469 43504539 - Cd3g protein_coding retained_intron MGP_129S1SvImJ_T0092107.1 MGP_129S1SvImJ_G0034724.1 mouse_genomes_project 9 43507289 43515331 - MGP_129S1SvImJ_P0092107 Cd3g protein_coding protein_coding MGP_129S1SvImJ_T0093396.1 MGP_129S1SvImJ_G0035080.1 mouse_genomes_project 9 80899405 81041646 - MGP_129S1SvImJ_P0093396 Impg1 protein_coding protein_coding MGP_129S1SvImJ_T0093397.1 MGP_129S1SvImJ_G0035080.1 mouse_genomes_project 9 80900042 81041689 - MGP_129S1SvImJ_P0093397 Impg1 protein_coding protein_coding MGP_129S1SvImJ_T0093398.1 MGP_129S1SvImJ_G0035080.1 mouse_genomes_project 9 80976138 81041646 - MGP_129S1SvImJ_P0093398 Impg1 protein_coding protein_coding MGP_129S1SvImJ_T0091767.1 MGP_129S1SvImJ_G0034561.1 mouse_genomes_project 9 35244124 35322598 - MGP_129S1SvImJ_P0091767 Ccdc15 protein_coding protein_coding MGP_129S1SvImJ_T0091768.1 MGP_129S1SvImJ_G0034561.1 mouse_genomes_project 9 35244563 35322532 - MGP_129S1SvImJ_P0091768 Ccdc15 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091769.1 MGP_129S1SvImJ_G0034561.1 mouse_genomes_project 9 35252242 35322499 - MGP_129S1SvImJ_P0091769 Ccdc15 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0018615.1 MGP_129S1SvImJ_G0015759.1 mouse_genomes_project 9 109977864 109984786 + Gm20529 processed_transcript processed_transcript MGP_129S1SvImJ_T0018577.1 MGP_129S1SvImJ_G0015744.1 mouse_genomes_project 9 73248698 73251747 + 2310009A05Rik processed_transcript antisense MGP_129S1SvImJ_T0018578.1 MGP_129S1SvImJ_G0015744.1 mouse_genomes_project 9 73248710 73251349 + 2310009A05Rik processed_transcript retained_intron MGP_129S1SvImJ_T0002434.1 MGP_129S1SvImJ_G0002343.1 mouse_genomes_project 9 92346798 92348625 - TEC TEC MGP_129S1SvImJ_T0095387.1 MGP_129S1SvImJ_G0035485.1 mouse_genomes_project 9 126904373 126913423 - MGP_129S1SvImJ_P0095387 Xcr1 protein_coding protein_coding MGP_129S1SvImJ_T0095162.1 MGP_129S1SvImJ_G0035413.1 mouse_genomes_project 9 121880680 121883171 + MGP_129S1SvImJ_P0095162 Gm10608 protein_coding protein_coding MGP_129S1SvImJ_T0093927.1 MGP_129S1SvImJ_G0035195.1 mouse_genomes_project 9 104799687 104842842 - MGP_129S1SvImJ_P0093927 Gm20425 protein_coding protein_coding MGP_129S1SvImJ_T0002455.1 MGP_129S1SvImJ_G0002364.1 mouse_genomes_project 9 102634933 102636817 + TEC TEC MGP_129S1SvImJ_T0011753.1 MGP_129S1SvImJ_G0009869.1 mouse_genomes_project 9 17965786 17966107 + Gm26274 misc_RNA misc_RNA MGP_129S1SvImJ_T0094267.1 MGP_129S1SvImJ_G0035258.1 mouse_genomes_project 9 109438656 109441517 + MGP_129S1SvImJ_P0094267 Tusc2 protein_coding protein_coding MGP_129S1SvImJ_T0094268.1 MGP_129S1SvImJ_G0035258.1 mouse_genomes_project 9 109438755 109439353 + Tusc2 protein_coding processed_transcript MGP_129S1SvImJ_T0094269.1 MGP_129S1SvImJ_G0035258.1 mouse_genomes_project 9 109438774 109440400 + MGP_129S1SvImJ_P0094269 Tusc2 protein_coding protein_coding MGP_129S1SvImJ_T0091293.1 MGP_129S1SvImJ_G0034392.1 mouse_genomes_project 9 16423467 16424406 - MGP_129S1SvImJ_P0091293 Olfr847 protein_coding protein_coding MGP_129S1SvImJ_T0095394.1 MGP_129S1SvImJ_G0035487.1 mouse_genomes_project 9 126995502 126995811 + MGP_129S1SvImJ_P0095394 Gm21860 protein_coding protein_coding MGP_129S1SvImJ_T0091284.1 MGP_129S1SvImJ_G0034383.1 mouse_genomes_project 9 15996649 16009816 - MGP_129S1SvImJ_P0091284 protein_coding protein_coding MGP_129S1SvImJ_T0092758.1 MGP_129S1SvImJ_G0034926.1 mouse_genomes_project 9 62449637 62560298 - MGP_129S1SvImJ_P0092758 Pias1 protein_coding protein_coding MGP_129S1SvImJ_T0094877.1 MGP_129S1SvImJ_G0035346.1 mouse_genomes_project 9 112530519 112553525 - MGP_129S1SvImJ_P0094877 Ptpn23 protein_coding protein_coding MGP_129S1SvImJ_T0094878.1 MGP_129S1SvImJ_G0035346.1 mouse_genomes_project 9 112530761 112531685 - MGP_129S1SvImJ_P0094878 Ptpn23 protein_coding protein_coding MGP_129S1SvImJ_T0094879.1 MGP_129S1SvImJ_G0035346.1 mouse_genomes_project 9 112531277 112532087 - Ptpn23 protein_coding retained_intron MGP_129S1SvImJ_T0094880.1 MGP_129S1SvImJ_G0035346.1 mouse_genomes_project 9 112534622 112535847 - Ptpn23 protein_coding retained_intron MGP_129S1SvImJ_T0094158.1 MGP_129S1SvImJ_G0035236.1 mouse_genomes_project 9 108314159 108316441 + MGP_129S1SvImJ_P0094158 Iqcf1 protein_coding protein_coding MGP_129S1SvImJ_T0094159.1 MGP_129S1SvImJ_G0035236.1 mouse_genomes_project 9 108314184 108316446 + MGP_129S1SvImJ_P0094159 Iqcf1 protein_coding protein_coding MGP_129S1SvImJ_T0092767.1 MGP_129S1SvImJ_G0034930.1 mouse_genomes_project 9 63016444 63214128 - MGP_129S1SvImJ_P0092767 Iqch protein_coding protein_coding MGP_129S1SvImJ_T0092768.1 MGP_129S1SvImJ_G0034930.1 mouse_genomes_project 9 63016609 63214083 - MGP_129S1SvImJ_P0092768 Iqch protein_coding protein_coding MGP_129S1SvImJ_T0092769.1 MGP_129S1SvImJ_G0034930.1 mouse_genomes_project 9 63016609 63214083 - MGP_129S1SvImJ_P0092769 Iqch protein_coding protein_coding MGP_129S1SvImJ_T0092770.1 MGP_129S1SvImJ_G0034930.1 mouse_genomes_project 9 63016651 63214118 - MGP_129S1SvImJ_P0092770 Iqch protein_coding protein_coding MGP_129S1SvImJ_T0092771.1 MGP_129S1SvImJ_G0034930.1 mouse_genomes_project 9 63016824 63214052 - MGP_129S1SvImJ_P0092771 Iqch protein_coding protein_coding MGP_129S1SvImJ_T0092772.1 MGP_129S1SvImJ_G0034930.1 mouse_genomes_project 9 63192524 63214120 - Iqch protein_coding retained_intron MGP_129S1SvImJ_T0011096.1 MGP_129S1SvImJ_G0009212.1 mouse_genomes_project 9 64406720 64406827 - miRNA miRNA MGP_129S1SvImJ_T0009356.1 MGP_129S1SvImJ_G0007516.1 mouse_genomes_project 9 120803029 120823215 + Gm17399 lincRNA lincRNA MGP_129S1SvImJ_T0002440.1 MGP_129S1SvImJ_G0002349.1 mouse_genomes_project 9 97191335 97193562 + TEC TEC MGP_129S1SvImJ_T0002381.1 MGP_129S1SvImJ_G0002291.1 mouse_genomes_project 9 33641351 33642424 + TEC TEC MGP_129S1SvImJ_T0005491.1 MGP_129S1SvImJ_G0004644.1 mouse_genomes_project 9 72515502 72571487 - BC065403 antisense antisense MGP_129S1SvImJ_T0005492.1 MGP_129S1SvImJ_G0004644.1 mouse_genomes_project 9 72570186 72571409 - BC065403 antisense antisense MGP_129S1SvImJ_T0093878.1 MGP_129S1SvImJ_G0035183.1 mouse_genomes_project 9 102938097 102938928 - MGP_129S1SvImJ_P0093878 Gm5145 protein_coding protein_coding MGP_129S1SvImJ_T0095152.1 MGP_129S1SvImJ_G0035410.1 mouse_genomes_project 9 121785233 121806965 - MGP_129S1SvImJ_P0095152 Plcd1 protein_coding protein_coding MGP_129S1SvImJ_T0091351.1 MGP_129S1SvImJ_G0034423.1 mouse_genomes_project 9 17786144 17791023 + Ubl5 protein_coding retained_intron MGP_129S1SvImJ_T0091352.1 MGP_129S1SvImJ_G0034423.1 mouse_genomes_project 9 17786593 17791212 + MGP_129S1SvImJ_P0091352 Ubl5 protein_coding protein_coding MGP_129S1SvImJ_T0091353.1 MGP_129S1SvImJ_G0034423.1 mouse_genomes_project 9 17787346 17791025 + MGP_129S1SvImJ_P0091353 Ubl5 protein_coding protein_coding MGP_129S1SvImJ_T0091354.1 MGP_129S1SvImJ_G0034423.1 mouse_genomes_project 9 17787615 17788930 + MGP_129S1SvImJ_P0091354 Ubl5 protein_coding protein_coding MGP_129S1SvImJ_T0091355.1 MGP_129S1SvImJ_G0034423.1 mouse_genomes_project 9 17788100 17791023 + MGP_129S1SvImJ_P0091355 Ubl5 protein_coding protein_coding MGP_129S1SvImJ_T0091356.1 MGP_129S1SvImJ_G0034423.1 mouse_genomes_project 9 17788113 17790146 + Ubl5 protein_coding retained_intron MGP_129S1SvImJ_T0091357.1 MGP_129S1SvImJ_G0034423.1 mouse_genomes_project 9 17788113 17791388 + MGP_129S1SvImJ_P0091357 Ubl5 protein_coding protein_coding MGP_129S1SvImJ_T0091358.1 MGP_129S1SvImJ_G0034423.1 mouse_genomes_project 9 17788114 17791023 + MGP_129S1SvImJ_P0091358 Ubl5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091359.1 MGP_129S1SvImJ_G0034423.1 mouse_genomes_project 9 17788147 17791017 + MGP_129S1SvImJ_P0091359 Ubl5 protein_coding protein_coding MGP_129S1SvImJ_T0091360.1 MGP_129S1SvImJ_G0034423.1 mouse_genomes_project 9 17788320 17791023 + MGP_129S1SvImJ_P0091360 Ubl5 protein_coding protein_coding MGP_129S1SvImJ_T0091361.1 MGP_129S1SvImJ_G0034423.1 mouse_genomes_project 9 17788497 17791024 + MGP_129S1SvImJ_P0091361 Ubl5 protein_coding protein_coding MGP_129S1SvImJ_T0092809.1 MGP_129S1SvImJ_G0034941.1 mouse_genomes_project 9 63974699 64009514 - MGP_129S1SvImJ_P0092809 Dis3l protein_coding protein_coding MGP_129S1SvImJ_T0092810.1 MGP_129S1SvImJ_G0034941.1 mouse_genomes_project 9 63974699 64008818 - MGP_129S1SvImJ_P0092810 Dis3l protein_coding protein_coding MGP_129S1SvImJ_T0092811.1 MGP_129S1SvImJ_G0034941.1 mouse_genomes_project 9 63974731 64009492 - MGP_129S1SvImJ_P0092811 Dis3l protein_coding protein_coding MGP_129S1SvImJ_T0092812.1 MGP_129S1SvImJ_G0034941.1 mouse_genomes_project 9 63991530 64009517 - Dis3l protein_coding retained_intron MGP_129S1SvImJ_T0092813.1 MGP_129S1SvImJ_G0034941.1 mouse_genomes_project 9 63997886 64004959 - MGP_129S1SvImJ_P0092813 Dis3l protein_coding protein_coding MGP_129S1SvImJ_T0092814.1 MGP_129S1SvImJ_G0034941.1 mouse_genomes_project 9 64004994 64009124 - Dis3l protein_coding processed_transcript MGP_129S1SvImJ_T0092815.1 MGP_129S1SvImJ_G0034941.1 mouse_genomes_project 9 64007817 64009618 - Dis3l protein_coding retained_intron MGP_129S1SvImJ_T0002491.1 MGP_129S1SvImJ_G0002400.1 mouse_genomes_project 9 113084681 113087484 - TEC TEC MGP_129S1SvImJ_T0092994.1 MGP_129S1SvImJ_G0034991.1 mouse_genomes_project 9 69388712 69423280 + MGP_129S1SvImJ_P0092994 Ice2 protein_coding protein_coding MGP_129S1SvImJ_T0092995.1 MGP_129S1SvImJ_G0034991.1 mouse_genomes_project 9 69388729 69422227 + Ice2 protein_coding retained_intron MGP_129S1SvImJ_T0092996.1 MGP_129S1SvImJ_G0034991.1 mouse_genomes_project 9 69388733 69397461 + MGP_129S1SvImJ_P0092996 Ice2 protein_coding protein_coding MGP_129S1SvImJ_T0092997.1 MGP_129S1SvImJ_G0034991.1 mouse_genomes_project 9 69388739 69397835 + MGP_129S1SvImJ_P0092997 Ice2 protein_coding protein_coding MGP_129S1SvImJ_T0092998.1 MGP_129S1SvImJ_G0034991.1 mouse_genomes_project 9 69388741 69397473 + MGP_129S1SvImJ_P0092998 Ice2 protein_coding protein_coding MGP_129S1SvImJ_T0092999.1 MGP_129S1SvImJ_G0034991.1 mouse_genomes_project 9 69388743 69398092 + MGP_129S1SvImJ_P0092999 Ice2 protein_coding protein_coding MGP_129S1SvImJ_T0093000.1 MGP_129S1SvImJ_G0034991.1 mouse_genomes_project 9 69388763 69400316 + MGP_129S1SvImJ_P0093000 Ice2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093001.1 MGP_129S1SvImJ_G0034991.1 mouse_genomes_project 9 69389454 69397320 + Ice2 protein_coding retained_intron MGP_129S1SvImJ_T0093002.1 MGP_129S1SvImJ_G0034991.1 mouse_genomes_project 9 69406882 69415853 + Ice2 protein_coding processed_transcript MGP_129S1SvImJ_T0093003.1 MGP_129S1SvImJ_G0034991.1 mouse_genomes_project 9 69407040 69417172 + Ice2 protein_coding retained_intron MGP_129S1SvImJ_T0091280.1 MGP_129S1SvImJ_G0034379.1 mouse_genomes_project 9 15815822 15816876 - MGP_129S1SvImJ_P0091280 Olfr24 protein_coding protein_coding MGP_129S1SvImJ_T0093894.1 MGP_129S1SvImJ_G0035188.1 mouse_genomes_project 9 104197602 104205732 + MGP_129S1SvImJ_P0093894 Anapc13 protein_coding protein_coding MGP_129S1SvImJ_T0093895.1 MGP_129S1SvImJ_G0035188.1 mouse_genomes_project 9 104197630 104205557 + MGP_129S1SvImJ_P0093895 Anapc13 protein_coding protein_coding MGP_129S1SvImJ_T0093896.1 MGP_129S1SvImJ_G0035188.1 mouse_genomes_project 9 104197969 104205549 + MGP_129S1SvImJ_P0093896 Anapc13 protein_coding protein_coding MGP_129S1SvImJ_T0093897.1 MGP_129S1SvImJ_G0035188.1 mouse_genomes_project 9 104197985 104205549 + MGP_129S1SvImJ_P0093897 Anapc13 protein_coding protein_coding MGP_129S1SvImJ_T0093898.1 MGP_129S1SvImJ_G0035188.1 mouse_genomes_project 9 104199818 104201034 + Anapc13 protein_coding retained_intron MGP_129S1SvImJ_T0094773.1 MGP_129S1SvImJ_G0035331.1 mouse_genomes_project 9 111451862 111501067 - MGP_129S1SvImJ_P0094773 protein_coding protein_coding MGP_129S1SvImJ_T0002428.1 MGP_129S1SvImJ_G0002337.1 mouse_genomes_project 9 90147735 90148788 + TEC TEC MGP_129S1SvImJ_T0091866.1 MGP_129S1SvImJ_G0034633.1 mouse_genomes_project 9 37604589 37614370 - MGP_129S1SvImJ_P0091866 Olfr44 protein_coding protein_coding MGP_129S1SvImJ_T0094247.1 MGP_129S1SvImJ_G0035255.1 mouse_genomes_project 9 109417726 109421206 + MGP_129S1SvImJ_P0094247 Nprl2 protein_coding protein_coding MGP_129S1SvImJ_T0094248.1 MGP_129S1SvImJ_G0035255.1 mouse_genomes_project 9 109417741 109420134 + MGP_129S1SvImJ_P0094248 Nprl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094249.1 MGP_129S1SvImJ_G0035255.1 mouse_genomes_project 9 109417745 109421195 + Nprl2 protein_coding retained_intron MGP_129S1SvImJ_T0094250.1 MGP_129S1SvImJ_G0035255.1 mouse_genomes_project 9 109417761 109419188 + Nprl2 protein_coding retained_intron MGP_129S1SvImJ_T0094251.1 MGP_129S1SvImJ_G0035255.1 mouse_genomes_project 9 109419476 109419960 + Nprl2 protein_coding retained_intron MGP_129S1SvImJ_T0009232.1 MGP_129S1SvImJ_G0007421.1 mouse_genomes_project 9 33710398 34189069 - lincRNA lincRNA MGP_129S1SvImJ_T0009237.1 MGP_129S1SvImJ_G0007421.1 mouse_genomes_project 9 34187850 34188511 - lincRNA lincRNA MGP_129S1SvImJ_T0091234.1 MGP_129S1SvImJ_G0034364.1 mouse_genomes_project 9 12289509 12295400 + MGP_129S1SvImJ_P0091234 Taf1d protein_coding protein_coding MGP_129S1SvImJ_T0091235.1 MGP_129S1SvImJ_G0034364.1 mouse_genomes_project 9 12289509 12295400 + MGP_129S1SvImJ_P0091235 Taf1d protein_coding protein_coding MGP_129S1SvImJ_T0005524.1 MGP_129S1SvImJ_G0004664.1 mouse_genomes_project 9 97189812 97203392 - Gm28085 antisense antisense MGP_129S1SvImJ_T0091691.1 MGP_129S1SvImJ_G0034537.1 mouse_genomes_project 9 33374004 33382547 + Pus3 protein_coding retained_intron MGP_129S1SvImJ_T0091692.1 MGP_129S1SvImJ_G0034537.1 mouse_genomes_project 9 33374869 33382810 + MGP_129S1SvImJ_P0091692 Pus3 protein_coding protein_coding MGP_129S1SvImJ_T0091693.1 MGP_129S1SvImJ_G0034537.1 mouse_genomes_project 9 33374875 33382248 + MGP_129S1SvImJ_P0091693 Pus3 protein_coding protein_coding MGP_129S1SvImJ_T0005469.1 MGP_129S1SvImJ_G0004630.1 mouse_genomes_project 9 54657717 54658716 - Gm17226 antisense antisense MGP_129S1SvImJ_T0005470.1 MGP_129S1SvImJ_G0004630.1 mouse_genomes_project 9 54657728 54659057 - Gm17226 antisense antisense MGP_129S1SvImJ_T0016103.1 MGP_129S1SvImJ_G0014192.1 mouse_genomes_project 9 84659447 84661048 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005514.1 MGP_129S1SvImJ_G0004661.1 mouse_genomes_project 9 97002842 97004942 - 1700065D16Rik antisense antisense MGP_129S1SvImJ_T0005515.1 MGP_129S1SvImJ_G0004661.1 mouse_genomes_project 9 97002844 97005296 - 1700065D16Rik antisense antisense MGP_129S1SvImJ_T0005516.1 MGP_129S1SvImJ_G0004661.1 mouse_genomes_project 9 97002844 97005747 - 1700065D16Rik antisense antisense MGP_129S1SvImJ_T0005517.1 MGP_129S1SvImJ_G0004661.1 mouse_genomes_project 9 97002845 97005296 - 1700065D16Rik antisense antisense MGP_129S1SvImJ_T0005518.1 MGP_129S1SvImJ_G0004661.1 mouse_genomes_project 9 97002976 97005745 - 1700065D16Rik antisense antisense MGP_129S1SvImJ_T0092338.1 MGP_129S1SvImJ_G0034796.1 mouse_genomes_project 9 49994600 50017467 - MGP_129S1SvImJ_P0092338 4833427G06Rik protein_coding protein_coding MGP_129S1SvImJ_T0016038.1 MGP_129S1SvImJ_G0014127.1 mouse_genomes_project 9 30390822 30391240 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009279.1 MGP_129S1SvImJ_G0007457.1 mouse_genomes_project 9 74822556 74823210 - Gm28622 lincRNA lincRNA MGP_129S1SvImJ_T0091231.1 MGP_129S1SvImJ_G0034363.1 mouse_genomes_project 9 12263154 12283129 - MGP_129S1SvImJ_P0091231 4931406C07Rik protein_coding protein_coding MGP_129S1SvImJ_T0091232.1 MGP_129S1SvImJ_G0034363.1 mouse_genomes_project 9 12263154 12289744 - MGP_129S1SvImJ_P0091232 4931406C07Rik protein_coding protein_coding MGP_129S1SvImJ_T0091233.1 MGP_129S1SvImJ_G0034363.1 mouse_genomes_project 9 12263154 12289463 - MGP_129S1SvImJ_P0091233 4931406C07Rik protein_coding protein_coding MGP_129S1SvImJ_T0092013.1 MGP_129S1SvImJ_G0034696.1 mouse_genomes_project 9 42719018 42723137 - MGP_129S1SvImJ_P0092013 Pdzd3 protein_coding protein_coding MGP_129S1SvImJ_T0100197.1 MGP_129S1SvImJ_G0038264.1 mouse_genomes_project 9 83088837 83088898 - Gm22836 snRNA snRNA MGP_129S1SvImJ_T0091160.1 MGP_129S1SvImJ_G0034340.1 mouse_genomes_project 9 10239029 10243308 - MGP_129S1SvImJ_P0091160 Jrkl protein_coding protein_coding MGP_129S1SvImJ_T0093760.1 MGP_129S1SvImJ_G0035153.1 mouse_genomes_project 9 99599694 99600277 + MGP_129S1SvImJ_P0093760 protein_coding protein_coding MGP_129S1SvImJ_T0009231.1 MGP_129S1SvImJ_G0007420.1 mouse_genomes_project 9 33329401 33331355 - lincRNA lincRNA MGP_129S1SvImJ_T0005497.1 MGP_129S1SvImJ_G0004648.1 mouse_genomes_project 9 76241857 76360111 - Gm26903 antisense antisense MGP_129S1SvImJ_T0091880.1 MGP_129S1SvImJ_G0034641.1 mouse_genomes_project 9 37804371 37805307 + MGP_129S1SvImJ_P0091880 Olfr963 protein_coding protein_coding MGP_129S1SvImJ_T0002395.1 MGP_129S1SvImJ_G0002305.1 mouse_genomes_project 9 72511007 72511992 + TEC TEC MGP_129S1SvImJ_T0094092.1 MGP_129S1SvImJ_G0035225.1 mouse_genomes_project 9 108018455 108035970 - MGP_129S1SvImJ_P0094092 Alas1 protein_coding protein_coding MGP_129S1SvImJ_T0094093.1 MGP_129S1SvImJ_G0035225.1 mouse_genomes_project 9 108018458 108036366 - MGP_129S1SvImJ_P0094093 Alas1 protein_coding protein_coding MGP_129S1SvImJ_T0094094.1 MGP_129S1SvImJ_G0035225.1 mouse_genomes_project 9 108018943 108036096 - MGP_129S1SvImJ_P0094094 Alas1 protein_coding protein_coding MGP_129S1SvImJ_T0094095.1 MGP_129S1SvImJ_G0035225.1 mouse_genomes_project 9 108018958 108030057 - Alas1 protein_coding processed_transcript MGP_129S1SvImJ_T0094096.1 MGP_129S1SvImJ_G0035225.1 mouse_genomes_project 9 108019211 108025172 - MGP_129S1SvImJ_P0094096 Alas1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094097.1 MGP_129S1SvImJ_G0035225.1 mouse_genomes_project 9 108021842 108023525 - Alas1 protein_coding retained_intron MGP_129S1SvImJ_T0094098.1 MGP_129S1SvImJ_G0035225.1 mouse_genomes_project 9 108023118 108026473 - Alas1 protein_coding retained_intron MGP_129S1SvImJ_T0094099.1 MGP_129S1SvImJ_G0035225.1 mouse_genomes_project 9 108025257 108036092 - MGP_129S1SvImJ_P0094099 Alas1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0016100.1 MGP_129S1SvImJ_G0014189.1 mouse_genomes_project 9 83738935 83739101 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095355.1 MGP_129S1SvImJ_G0035475.1 mouse_genomes_project 9 126288598 126290330 - MGP_129S1SvImJ_P0095355 Tmem158 protein_coding protein_coding MGP_129S1SvImJ_T0091442.1 MGP_129S1SvImJ_G0034456.1 mouse_genomes_project 9 18799855 18820990 + MGP_129S1SvImJ_P0091442 Carm1 protein_coding protein_coding MGP_129S1SvImJ_T0091443.1 MGP_129S1SvImJ_G0034456.1 mouse_genomes_project 9 18801772 18821787 + Carm1 protein_coding retained_intron MGP_129S1SvImJ_T0091444.1 MGP_129S1SvImJ_G0034456.1 mouse_genomes_project 9 18801772 18811785 + Carm1 protein_coding processed_transcript MGP_129S1SvImJ_T0091445.1 MGP_129S1SvImJ_G0034456.1 mouse_genomes_project 9 18801772 18821787 + MGP_129S1SvImJ_P0091445 Carm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091446.1 MGP_129S1SvImJ_G0034456.1 mouse_genomes_project 9 18801772 18821787 + MGP_129S1SvImJ_P0091446 Carm1 protein_coding protein_coding MGP_129S1SvImJ_T0091447.1 MGP_129S1SvImJ_G0034456.1 mouse_genomes_project 9 18807421 18812657 + Carm1 protein_coding processed_transcript MGP_129S1SvImJ_T0091448.1 MGP_129S1SvImJ_G0034456.1 mouse_genomes_project 9 18819537 18820520 + Carm1 protein_coding processed_transcript MGP_129S1SvImJ_T0091449.1 MGP_129S1SvImJ_G0034456.1 mouse_genomes_project 9 18819722 18820449 + Carm1 protein_coding processed_transcript MGP_129S1SvImJ_T0016131.1 MGP_129S1SvImJ_G0014220.1 mouse_genomes_project 9 96521743 96522725 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0093881.1 MGP_129S1SvImJ_G0035185.1 mouse_genomes_project 9 103461171 103465927 + MGP_129S1SvImJ_P0093881 9630041A04Rik protein_coding protein_coding MGP_129S1SvImJ_T0091848.1 MGP_129S1SvImJ_G0034615.1 mouse_genomes_project 9 36895370 36896502 + MGP_129S1SvImJ_P0091848 Olfr922 protein_coding protein_coding MGP_129S1SvImJ_T0002472.1 MGP_129S1SvImJ_G0002381.1 mouse_genomes_project 9 106787998 106791277 + TEC TEC MGP_129S1SvImJ_T0094888.1 MGP_129S1SvImJ_G0035349.1 mouse_genomes_project 9 112633941 112646895 + MGP_129S1SvImJ_P0094888 Kif9 protein_coding protein_coding MGP_129S1SvImJ_T0094889.1 MGP_129S1SvImJ_G0035349.1 mouse_genomes_project 9 112633977 112686265 + MGP_129S1SvImJ_P0094889 Kif9 protein_coding protein_coding MGP_129S1SvImJ_T0094890.1 MGP_129S1SvImJ_G0035349.1 mouse_genomes_project 9 112633977 112686124 + MGP_129S1SvImJ_P0094890 Kif9 protein_coding protein_coding MGP_129S1SvImJ_T0094891.1 MGP_129S1SvImJ_G0035349.1 mouse_genomes_project 9 112633977 112683217 + MGP_129S1SvImJ_P0094891 Kif9 protein_coding protein_coding MGP_129S1SvImJ_T0094892.1 MGP_129S1SvImJ_G0035349.1 mouse_genomes_project 9 112635188 112684923 + MGP_129S1SvImJ_P0094892 Kif9 protein_coding protein_coding MGP_129S1SvImJ_T0095395.1 MGP_129S1SvImJ_G0035488.1 mouse_genomes_project 9 127004318 127005375 - MGP_129S1SvImJ_P0095395 protein_coding protein_coding MGP_129S1SvImJ_T0092844.1 MGP_129S1SvImJ_G0034950.1 mouse_genomes_project 9 64845315 64893807 + MGP_129S1SvImJ_P0092844 Igdcc3 protein_coding protein_coding MGP_129S1SvImJ_T0092845.1 MGP_129S1SvImJ_G0034950.1 mouse_genomes_project 9 64845576 64893284 + MGP_129S1SvImJ_P0092845 Igdcc3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0094217.1 MGP_129S1SvImJ_G0035249.1 mouse_genomes_project 9 109152330 109158888 + MGP_129S1SvImJ_P0094217 Cish protein_coding protein_coding MGP_129S1SvImJ_T0094218.1 MGP_129S1SvImJ_G0035249.1 mouse_genomes_project 9 109153638 109159686 + MGP_129S1SvImJ_P0094218 Cish protein_coding protein_coding MGP_129S1SvImJ_T0094219.1 MGP_129S1SvImJ_G0035249.1 mouse_genomes_project 9 109153835 109158844 + Cish protein_coding processed_transcript MGP_129S1SvImJ_T0094220.1 MGP_129S1SvImJ_G0035249.1 mouse_genomes_project 9 109153840 109157452 + MGP_129S1SvImJ_P0094220 Cish protein_coding protein_coding MGP_129S1SvImJ_T0094221.1 MGP_129S1SvImJ_G0035249.1 mouse_genomes_project 9 109156056 109157359 + Cish protein_coding processed_transcript MGP_129S1SvImJ_T0091392.1 MGP_129S1SvImJ_G0034442.1 mouse_genomes_project 9 18322098 18333439 - MGP_129S1SvImJ_P0091392 Cdc37 protein_coding protein_coding MGP_129S1SvImJ_T0002385.1 MGP_129S1SvImJ_G0002295.1 mouse_genomes_project 9 71977830 71979566 - TEC TEC MGP_129S1SvImJ_T0091316.1 MGP_129S1SvImJ_G0034415.1 mouse_genomes_project 9 17428951 17430013 + MGP_129S1SvImJ_P0091316 Olfr873 protein_coding protein_coding MGP_129S1SvImJ_T0094511.1 MGP_129S1SvImJ_G0035291.1 mouse_genomes_project 9 110248318 110251351 - MGP_129S1SvImJ_P0094511 Tcta protein_coding protein_coding MGP_129S1SvImJ_T0094512.1 MGP_129S1SvImJ_G0035291.1 mouse_genomes_project 9 110249014 110251521 - MGP_129S1SvImJ_P0094512 Tcta protein_coding protein_coding MGP_129S1SvImJ_T0094513.1 MGP_129S1SvImJ_G0035291.1 mouse_genomes_project 9 110249250 110251309 - MGP_129S1SvImJ_P0094513 Tcta protein_coding protein_coding MGP_129S1SvImJ_T0002452.1 MGP_129S1SvImJ_G0002361.1 mouse_genomes_project 9 102574497 102576098 + TEC TEC MGP_129S1SvImJ_T0005571.1 MGP_129S1SvImJ_G0004702.1 mouse_genomes_project 9 113806882 113807496 + Gm43236 antisense antisense MGP_129S1SvImJ_T0091836.1 MGP_129S1SvImJ_G0034609.1 mouse_genomes_project 9 36726440 36727370 - MGP_129S1SvImJ_P0091836 Olfr917 protein_coding protein_coding MGP_129S1SvImJ_T0091177.1 MGP_129S1SvImJ_G0034345.1 mouse_genomes_project 9 10726855 10746409 - MGP_129S1SvImJ_P0091177 Cep57 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091178.1 MGP_129S1SvImJ_G0034345.1 mouse_genomes_project 9 10726858 10746470 - MGP_129S1SvImJ_P0091178 Cep57 protein_coding protein_coding MGP_129S1SvImJ_T0091179.1 MGP_129S1SvImJ_G0034345.1 mouse_genomes_project 9 10726888 10746373 - MGP_129S1SvImJ_P0091179 Cep57 protein_coding protein_coding MGP_129S1SvImJ_T0091180.1 MGP_129S1SvImJ_G0034345.1 mouse_genomes_project 9 10727612 10746443 - MGP_129S1SvImJ_P0091180 Cep57 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091181.1 MGP_129S1SvImJ_G0034345.1 mouse_genomes_project 9 10727670 10746588 - MGP_129S1SvImJ_P0091181 Cep57 protein_coding protein_coding MGP_129S1SvImJ_T0091182.1 MGP_129S1SvImJ_G0034345.1 mouse_genomes_project 9 10727810 10729478 - Cep57 protein_coding retained_intron MGP_129S1SvImJ_T0091183.1 MGP_129S1SvImJ_G0034345.1 mouse_genomes_project 9 10727879 10738083 - MGP_129S1SvImJ_P0091183 Cep57 protein_coding protein_coding MGP_129S1SvImJ_T0091184.1 MGP_129S1SvImJ_G0034345.1 mouse_genomes_project 9 10729783 10738327 - MGP_129S1SvImJ_P0091184 Cep57 protein_coding protein_coding MGP_129S1SvImJ_T0091185.1 MGP_129S1SvImJ_G0034345.1 mouse_genomes_project 9 10732473 10738363 - Cep57 protein_coding retained_intron MGP_129S1SvImJ_T0091186.1 MGP_129S1SvImJ_G0034345.1 mouse_genomes_project 9 10732849 10746471 - MGP_129S1SvImJ_P0091186 Cep57 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091187.1 MGP_129S1SvImJ_G0034345.1 mouse_genomes_project 9 10732864 10735815 - Cep57 protein_coding retained_intron MGP_129S1SvImJ_T0094696.1 MGP_129S1SvImJ_G0035317.1 mouse_genomes_project 9 110881271 110895063 + MGP_129S1SvImJ_P0094696 Uqcrc1 protein_coding protein_coding MGP_129S1SvImJ_T0094697.1 MGP_129S1SvImJ_G0035317.1 mouse_genomes_project 9 110881352 110890335 + MGP_129S1SvImJ_P0094697 Uqcrc1 protein_coding protein_coding MGP_129S1SvImJ_T0094698.1 MGP_129S1SvImJ_G0035317.1 mouse_genomes_project 9 110881353 110890151 + MGP_129S1SvImJ_P0094698 Uqcrc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094699.1 MGP_129S1SvImJ_G0035317.1 mouse_genomes_project 9 110881530 110889870 + Uqcrc1 protein_coding retained_intron MGP_129S1SvImJ_T0094700.1 MGP_129S1SvImJ_G0035317.1 mouse_genomes_project 9 110887971 110890457 + MGP_129S1SvImJ_P0094700 Uqcrc1 protein_coding protein_coding MGP_129S1SvImJ_T0094701.1 MGP_129S1SvImJ_G0035317.1 mouse_genomes_project 9 110891604 110895059 + Uqcrc1 protein_coding retained_intron MGP_129S1SvImJ_T0094702.1 MGP_129S1SvImJ_G0035317.1 mouse_genomes_project 9 110892856 110894980 + MGP_129S1SvImJ_P0094702 Uqcrc1 protein_coding protein_coding MGP_129S1SvImJ_T0094703.1 MGP_129S1SvImJ_G0035317.1 mouse_genomes_project 9 110893750 110894552 + Uqcrc1 protein_coding retained_intron MGP_129S1SvImJ_T0002482.1 MGP_129S1SvImJ_G0002391.1 mouse_genomes_project 9 110496006 110497940 + TEC TEC MGP_129S1SvImJ_T0092242.1 MGP_129S1SvImJ_G0034771.1 mouse_genomes_project 9 48163148 48230857 + MGP_129S1SvImJ_P0092242 Drd2 protein_coding protein_coding MGP_129S1SvImJ_T0094241.1 MGP_129S1SvImJ_G0035253.1 mouse_genomes_project 9 109409441 109414174 + MGP_129S1SvImJ_P0094241 Tmem115 protein_coding protein_coding MGP_129S1SvImJ_T0093467.1 MGP_129S1SvImJ_G0035093.1 mouse_genomes_project 9 86639277 86643746 + MGP_129S1SvImJ_P0093467 Tpbg protein_coding protein_coding MGP_129S1SvImJ_T0093468.1 MGP_129S1SvImJ_G0035093.1 mouse_genomes_project 9 86639762 86643746 + MGP_129S1SvImJ_P0093468 Tpbg protein_coding protein_coding MGP_129S1SvImJ_T0093469.1 MGP_129S1SvImJ_G0035093.1 mouse_genomes_project 9 86640076 86640641 + Tpbg protein_coding processed_transcript MGP_129S1SvImJ_T0092413.1 MGP_129S1SvImJ_G0034828.1 mouse_genomes_project 9 53757880 53773799 + MGP_129S1SvImJ_P0092413 Dnaja4 protein_coding protein_coding MGP_129S1SvImJ_T0092414.1 MGP_129S1SvImJ_G0034828.1 mouse_genomes_project 9 53758521 53768379 + MGP_129S1SvImJ_P0092414 Dnaja4 protein_coding protein_coding MGP_129S1SvImJ_T0092415.1 MGP_129S1SvImJ_G0034828.1 mouse_genomes_project 9 53758566 53775353 + MGP_129S1SvImJ_P0092415 Dnaja4 protein_coding protein_coding MGP_129S1SvImJ_T0002458.1 MGP_129S1SvImJ_G0002367.1 mouse_genomes_project 9 103429285 103431689 - TEC TEC MGP_129S1SvImJ_T0094081.1 MGP_129S1SvImJ_G0035222.1 mouse_genomes_project 9 107976052 107981224 - MGP_129S1SvImJ_P0094081 Ppm1m protein_coding protein_coding MGP_129S1SvImJ_T0094082.1 MGP_129S1SvImJ_G0035222.1 mouse_genomes_project 9 107976052 107980852 - MGP_129S1SvImJ_P0094082 Ppm1m protein_coding protein_coding MGP_129S1SvImJ_T0094083.1 MGP_129S1SvImJ_G0035222.1 mouse_genomes_project 9 107976827 107978778 - MGP_129S1SvImJ_P0094083 Ppm1m protein_coding protein_coding MGP_129S1SvImJ_T0094084.1 MGP_129S1SvImJ_G0035222.1 mouse_genomes_project 9 107979424 107980248 - Ppm1m protein_coding retained_intron MGP_129S1SvImJ_T0094085.1 MGP_129S1SvImJ_G0035222.1 mouse_genomes_project 9 107979834 107981691 - Ppm1m protein_coding processed_transcript MGP_129S1SvImJ_T0092371.1 MGP_129S1SvImJ_G0034812.1 mouse_genomes_project 9 52561470 52600290 + MGP_129S1SvImJ_P0092371 Npat protein_coding protein_coding MGP_129S1SvImJ_T0092372.1 MGP_129S1SvImJ_G0034812.1 mouse_genomes_project 9 52589487 52593164 + Npat protein_coding retained_intron MGP_129S1SvImJ_T0016138.1 MGP_129S1SvImJ_G0014227.1 mouse_genomes_project 9 98037400 98037668 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0093977.1 MGP_129S1SvImJ_G0035206.1 mouse_genomes_project 9 105733769 105754937 - Ackr4 protein_coding processed_transcript MGP_129S1SvImJ_T0093980.1 MGP_129S1SvImJ_G0035206.1 mouse_genomes_project 9 105750498 105780729 - MGP_129S1SvImJ_P0093980 Ackr4 protein_coding protein_coding MGP_129S1SvImJ_T0093981.1 MGP_129S1SvImJ_G0035206.1 mouse_genomes_project 9 105750629 105755396 - MGP_129S1SvImJ_P0093981 Ackr4 protein_coding protein_coding MGP_129S1SvImJ_T0095332.1 MGP_129S1SvImJ_G0035469.1 mouse_genomes_project 9 126038253 126040387 + MGP_129S1SvImJ_P0095332 Tmem42 protein_coding protein_coding MGP_129S1SvImJ_T0095209.1 MGP_129S1SvImJ_G0035430.1 mouse_genomes_project 9 122911261 122914039 + MGP_129S1SvImJ_P0095209 Ccr8 protein_coding protein_coding MGP_129S1SvImJ_T0091869.1 MGP_129S1SvImJ_G0034636.1 mouse_genomes_project 9 37704771 37705826 - MGP_129S1SvImJ_P0091869 Olfr959 protein_coding protein_coding MGP_129S1SvImJ_T0018616.1 MGP_129S1SvImJ_G0015760.1 mouse_genomes_project 9 110064872 110069202 + 4930447F24Rik processed_transcript antisense MGP_129S1SvImJ_T0018617.1 MGP_129S1SvImJ_G0015760.1 mouse_genomes_project 9 110068152 110069865 + 4930447F24Rik processed_transcript antisense MGP_129S1SvImJ_T0018618.1 MGP_129S1SvImJ_G0015760.1 mouse_genomes_project 9 110068625 110069013 + 4930447F24Rik processed_transcript retained_intron MGP_129S1SvImJ_T0016059.1 MGP_129S1SvImJ_G0014148.1 mouse_genomes_project 9 58818403 58818878 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002407.1 MGP_129S1SvImJ_G0002317.1 mouse_genomes_project 9 73353488 73355721 + TEC TEC MGP_129S1SvImJ_T0002493.1 MGP_129S1SvImJ_G0002402.1 mouse_genomes_project 9 113648297 113649793 + TEC TEC MGP_129S1SvImJ_T0092392.1 MGP_129S1SvImJ_G0034820.1 mouse_genomes_project 9 53057569 53097565 - MGP_129S1SvImJ_P0092392 Tnfaip8l3 protein_coding protein_coding MGP_129S1SvImJ_T0092329.1 MGP_129S1SvImJ_G0034794.1 mouse_genomes_project 9 49798653 49918662 - MGP_129S1SvImJ_P0092329 Sik2 protein_coding protein_coding MGP_129S1SvImJ_T0092330.1 MGP_129S1SvImJ_G0034794.1 mouse_genomes_project 9 49798653 49918562 - MGP_129S1SvImJ_P0092330 Sik2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092331.1 MGP_129S1SvImJ_G0034794.1 mouse_genomes_project 9 49798653 49918525 - MGP_129S1SvImJ_P0092331 Sik2 protein_coding protein_coding MGP_129S1SvImJ_T0092332.1 MGP_129S1SvImJ_G0034794.1 mouse_genomes_project 9 49798653 49918525 - MGP_129S1SvImJ_P0092332 Sik2 protein_coding protein_coding MGP_129S1SvImJ_T0092333.1 MGP_129S1SvImJ_G0034794.1 mouse_genomes_project 9 49836811 49918615 - Sik2 protein_coding processed_transcript MGP_129S1SvImJ_T0092334.1 MGP_129S1SvImJ_G0034794.1 mouse_genomes_project 9 49839202 49918573 - Sik2 protein_coding processed_transcript MGP_129S1SvImJ_T0092335.1 MGP_129S1SvImJ_G0034794.1 mouse_genomes_project 9 49842472 49918589 - Sik2 protein_coding retained_intron MGP_129S1SvImJ_T0092336.1 MGP_129S1SvImJ_G0034794.1 mouse_genomes_project 9 49905153 49918600 - Sik2 protein_coding retained_intron MGP_129S1SvImJ_T0095368.1 MGP_129S1SvImJ_G0035481.1 mouse_genomes_project 9 126735851 126834443 + MGP_129S1SvImJ_P0095368 Ccr9 protein_coding protein_coding MGP_129S1SvImJ_T0095378.1 MGP_129S1SvImJ_G0035481.1 mouse_genomes_project 9 126818843 126834441 + MGP_129S1SvImJ_P0095378 Ccr9 protein_coding protein_coding MGP_129S1SvImJ_T0095379.1 MGP_129S1SvImJ_G0035481.1 mouse_genomes_project 9 126818859 126834003 + MGP_129S1SvImJ_P0095379 Ccr9 protein_coding protein_coding MGP_129S1SvImJ_T0095380.1 MGP_129S1SvImJ_G0035481.1 mouse_genomes_project 9 126818861 126834449 + MGP_129S1SvImJ_P0095380 Ccr9 protein_coding protein_coding MGP_129S1SvImJ_T0095381.1 MGP_129S1SvImJ_G0035481.1 mouse_genomes_project 9 126827159 126835934 + MGP_129S1SvImJ_P0095381 Ccr9 protein_coding protein_coding MGP_129S1SvImJ_T0092920.1 MGP_129S1SvImJ_G0034974.1 mouse_genomes_project 9 65966430 66090087 + MGP_129S1SvImJ_P0092920 Dapk2 protein_coding protein_coding MGP_129S1SvImJ_T0092921.1 MGP_129S1SvImJ_G0034974.1 mouse_genomes_project 9 65966442 66035939 + Dapk2 protein_coding retained_intron MGP_129S1SvImJ_T0092922.1 MGP_129S1SvImJ_G0034974.1 mouse_genomes_project 9 66034605 66086807 + MGP_129S1SvImJ_P0092922 Dapk2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092923.1 MGP_129S1SvImJ_G0034974.1 mouse_genomes_project 9 66086241 66089560 + Dapk2 protein_coding retained_intron MGP_129S1SvImJ_T0018597.1 MGP_129S1SvImJ_G0015752.1 mouse_genomes_project 9 89730167 89748396 - processed_transcript antisense MGP_129S1SvImJ_T0009332.1 MGP_129S1SvImJ_G0007500.1 mouse_genomes_project 9 105557377 105603581 - Gm29154 lincRNA lincRNA MGP_129S1SvImJ_T0009333.1 MGP_129S1SvImJ_G0007500.1 mouse_genomes_project 9 105557480 105602873 - Gm29154 lincRNA lincRNA MGP_129S1SvImJ_T0016065.1 MGP_129S1SvImJ_G0014154.1 mouse_genomes_project 9 65631542 65632059 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002456.1 MGP_129S1SvImJ_G0002365.1 mouse_genomes_project 9 102671878 102673232 - TEC TEC MGP_129S1SvImJ_T0091386.1 MGP_129S1SvImJ_G0034437.1 mouse_genomes_project 9 18213191 18221810 + MGP_129S1SvImJ_P0091386 Icam5 protein_coding protein_coding MGP_129S1SvImJ_T0000371.1 MGP_129S1SvImJ_G0000313.1 mouse_genomes_project 9 126129513 126129580 + mt-Tc Mt_tRNA Mt_tRNA MGP_129S1SvImJ_T0092395.1 MGP_129S1SvImJ_G0034823.1 mouse_genomes_project 9 53402651 53544038 - MGP_129S1SvImJ_P0092395 Dmxl2 protein_coding protein_coding MGP_129S1SvImJ_T0092396.1 MGP_129S1SvImJ_G0034823.1 mouse_genomes_project 9 53402657 53419324 - Dmxl2 protein_coding retained_intron MGP_129S1SvImJ_T0092397.1 MGP_129S1SvImJ_G0034823.1 mouse_genomes_project 9 53402753 53483052 - MGP_129S1SvImJ_P0092397 Dmxl2 protein_coding protein_coding MGP_129S1SvImJ_T0092398.1 MGP_129S1SvImJ_G0034823.1 mouse_genomes_project 9 53403604 53543908 - MGP_129S1SvImJ_P0092398 Dmxl2 protein_coding protein_coding MGP_129S1SvImJ_T0092399.1 MGP_129S1SvImJ_G0034823.1 mouse_genomes_project 9 53452934 53514488 - MGP_129S1SvImJ_P0092399 Dmxl2 protein_coding protein_coding MGP_129S1SvImJ_T0092400.1 MGP_129S1SvImJ_G0034823.1 mouse_genomes_project 9 53461330 53543983 - Dmxl2 protein_coding retained_intron MGP_129S1SvImJ_T0092401.1 MGP_129S1SvImJ_G0034823.1 mouse_genomes_project 9 53482962 53484633 - Dmxl2 protein_coding processed_transcript MGP_129S1SvImJ_T0092402.1 MGP_129S1SvImJ_G0034823.1 mouse_genomes_project 9 53513000 53544038 - Dmxl2 protein_coding retained_intron MGP_129S1SvImJ_T0092403.1 MGP_129S1SvImJ_G0034823.1 mouse_genomes_project 9 53514174 53544172 - MGP_129S1SvImJ_P0092403 Dmxl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0011126.1 MGP_129S1SvImJ_G0009242.1 mouse_genomes_project 9 112801796 112801913 - Mir8107 miRNA miRNA MGP_129S1SvImJ_T0091283.1 MGP_129S1SvImJ_G0034382.1 mouse_genomes_project 9 15939013 15939961 + MGP_129S1SvImJ_P0091283 Olfr830 protein_coding protein_coding MGP_129S1SvImJ_T0092028.1 MGP_129S1SvImJ_G0034702.1 mouse_genomes_project 9 42817655 42820496 + MGP_129S1SvImJ_P0092028 H2afx protein_coding protein_coding MGP_129S1SvImJ_T0009229.1 MGP_129S1SvImJ_G0007418.1 mouse_genomes_project 9 31829958 31849715 + 7630403G23Rik lincRNA lincRNA MGP_129S1SvImJ_T0092256.1 MGP_129S1SvImJ_G0034778.1 mouse_genomes_project 9 49423456 49446695 - MGP_129S1SvImJ_P0092256 Bco2 protein_coding protein_coding MGP_129S1SvImJ_T0091963.1 MGP_129S1SvImJ_G0034681.1 mouse_genomes_project 9 41490217 41498902 - MGP_129S1SvImJ_P0091963 Tmem136 protein_coding protein_coding MGP_129S1SvImJ_T0093399.1 MGP_129S1SvImJ_G0035081.1 mouse_genomes_project 9 82233989 82239531 - MGP_129S1SvImJ_P0093399 Htr1b protein_coding protein_coding MGP_129S1SvImJ_T0093400.1 MGP_129S1SvImJ_G0035081.1 mouse_genomes_project 9 82237045 82238318 - MGP_129S1SvImJ_P0093400 Htr1b protein_coding protein_coding MGP_129S1SvImJ_T0091338.1 MGP_129S1SvImJ_G0034421.1 mouse_genomes_project 9 17723372 17737087 + MGP_129S1SvImJ_P0091338 Zfp846 protein_coding protein_coding MGP_129S1SvImJ_T0091339.1 MGP_129S1SvImJ_G0034421.1 mouse_genomes_project 9 17723573 17737089 + MGP_129S1SvImJ_P0091339 Zfp846 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091340.1 MGP_129S1SvImJ_G0034421.1 mouse_genomes_project 9 17729789 17736366 + MGP_129S1SvImJ_P0091340 Zfp846 protein_coding protein_coding MGP_129S1SvImJ_T0009275.1 MGP_129S1SvImJ_G0007453.1 mouse_genomes_project 9 72570809 72571420 + Gm27255 lincRNA lincRNA MGP_129S1SvImJ_T0093344.1 MGP_129S1SvImJ_G0035071.1 mouse_genomes_project 9 78955225 78990127 + MGP_129S1SvImJ_P0093344 Mto1 protein_coding protein_coding MGP_129S1SvImJ_T0093345.1 MGP_129S1SvImJ_G0035071.1 mouse_genomes_project 9 78955225 78990127 + MGP_129S1SvImJ_P0093345 Mto1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093346.1 MGP_129S1SvImJ_G0035071.1 mouse_genomes_project 9 78955230 78957482 + Mto1 protein_coding retained_intron MGP_129S1SvImJ_T0093347.1 MGP_129S1SvImJ_G0035071.1 mouse_genomes_project 9 78975874 78983606 + Mto1 protein_coding retained_intron MGP_129S1SvImJ_T0093348.1 MGP_129S1SvImJ_G0035071.1 mouse_genomes_project 9 78976167 78991324 + MGP_129S1SvImJ_P0093348 Mto1 protein_coding protein_coding MGP_129S1SvImJ_T0093349.1 MGP_129S1SvImJ_G0035071.1 mouse_genomes_project 9 78983257 78989808 + Mto1 protein_coding retained_intron MGP_129S1SvImJ_T0092087.1 MGP_129S1SvImJ_G0034719.1 mouse_genomes_project 9 43323271 43328748 - Tmem25 protein_coding processed_transcript MGP_129S1SvImJ_T0092088.1 MGP_129S1SvImJ_G0034719.1 mouse_genomes_project 9 43323271 43328748 - MGP_129S1SvImJ_P0092088 Tmem25 protein_coding protein_coding MGP_129S1SvImJ_T0092089.1 MGP_129S1SvImJ_G0034719.1 mouse_genomes_project 9 43323271 43328813 - MGP_129S1SvImJ_P0092089 Tmem25 protein_coding protein_coding MGP_129S1SvImJ_T0011129.1 MGP_129S1SvImJ_G0009245.1 mouse_genomes_project 9 117898481 117898604 + Mir467h miRNA miRNA MGP_129S1SvImJ_T0005467.1 MGP_129S1SvImJ_G0004628.1 mouse_genomes_project 9 52706799 52720818 + Gm16124 antisense antisense MGP_129S1SvImJ_T0005533.1 MGP_129S1SvImJ_G0004671.1 mouse_genomes_project 9 100663995 100669662 - 4930422M22Rik antisense antisense MGP_129S1SvImJ_T0091632.1 MGP_129S1SvImJ_G0034526.1 mouse_genomes_project 9 30397927 30500339 + Ets1 protein_coding retained_intron MGP_129S1SvImJ_T0091633.1 MGP_129S1SvImJ_G0034526.1 mouse_genomes_project 9 30397945 30414078 + Ets1 protein_coding retained_intron MGP_129S1SvImJ_T0091634.1 MGP_129S1SvImJ_G0034526.1 mouse_genomes_project 9 30463974 30525469 + MGP_129S1SvImJ_P0091634 Ets1 protein_coding protein_coding MGP_129S1SvImJ_T0091635.1 MGP_129S1SvImJ_G0034526.1 mouse_genomes_project 9 30464309 30528283 + MGP_129S1SvImJ_P0091635 Ets1 protein_coding protein_coding MGP_129S1SvImJ_T0091636.1 MGP_129S1SvImJ_G0034526.1 mouse_genomes_project 9 30464309 30524895 + MGP_129S1SvImJ_P0091636 Ets1 protein_coding protein_coding MGP_129S1SvImJ_T0002426.1 MGP_129S1SvImJ_G0002335.1 mouse_genomes_project 9 88585834 88588640 + TEC TEC MGP_129S1SvImJ_T0092111.1 MGP_129S1SvImJ_G0034728.1 mouse_genomes_project 9 43595420 43618978 + MGP_129S1SvImJ_P0092111 Mpzl3 protein_coding protein_coding MGP_129S1SvImJ_T0092112.1 MGP_129S1SvImJ_G0034728.1 mouse_genomes_project 9 43595422 43605420 + Mpzl3 protein_coding retained_intron MGP_129S1SvImJ_T0092113.1 MGP_129S1SvImJ_G0034728.1 mouse_genomes_project 9 43595443 43607089 + MGP_129S1SvImJ_P0092113 Mpzl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092114.1 MGP_129S1SvImJ_G0034728.1 mouse_genomes_project 9 43599498 43605904 + Mpzl3 protein_coding retained_intron MGP_129S1SvImJ_T0092115.1 MGP_129S1SvImJ_G0034728.1 mouse_genomes_project 9 43612126 43616704 + Mpzl3 protein_coding retained_intron MGP_129S1SvImJ_T0092134.1 MGP_129S1SvImJ_G0034737.1 mouse_genomes_project 9 43928391 43955259 + MGP_129S1SvImJ_P0092134 Fxyd6 protein_coding protein_coding MGP_129S1SvImJ_T0016154.1 MGP_129S1SvImJ_G0014243.1 mouse_genomes_project 9 104120766 104120967 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101503.1 MGP_129S1SvImJ_G0039570.1 mouse_genomes_project 9 122958048 122958197 + Snora62 snoRNA snoRNA MGP_129S1SvImJ_T0091569.1 MGP_129S1SvImJ_G0034508.1 mouse_genomes_project 9 24781484 24812100 + MGP_129S1SvImJ_P0091569 Igsf9b protein_coding protein_coding MGP_129S1SvImJ_T0091570.1 MGP_129S1SvImJ_G0034508.1 mouse_genomes_project 9 24781486 24816728 + MGP_129S1SvImJ_P0091570 Igsf9b protein_coding protein_coding MGP_129S1SvImJ_T0091571.1 MGP_129S1SvImJ_G0034508.1 mouse_genomes_project 9 24781710 24833200 + MGP_129S1SvImJ_P0091571 Igsf9b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091310.1 MGP_129S1SvImJ_G0034409.1 mouse_genomes_project 9 17197444 17200510 + MGP_129S1SvImJ_P0091310 Olfr868 protein_coding protein_coding MGP_129S1SvImJ_T0101443.1 MGP_129S1SvImJ_G0039510.1 mouse_genomes_project 9 22999398 22999526 - Gm25346 snoRNA snoRNA MGP_129S1SvImJ_T0091458.1 MGP_129S1SvImJ_G0034460.1 mouse_genomes_project 9 18967038 19000985 + MGP_129S1SvImJ_P0091458 Ldlr protein_coding protein_coding MGP_129S1SvImJ_T0095138.1 MGP_129S1SvImJ_G0035408.1 mouse_genomes_project 9 121641134 121757952 + MGP_129S1SvImJ_P0095138 Ctdspl protein_coding protein_coding MGP_129S1SvImJ_T0095139.1 MGP_129S1SvImJ_G0035408.1 mouse_genomes_project 9 121641321 121754610 + MGP_129S1SvImJ_P0095139 Ctdspl protein_coding protein_coding MGP_129S1SvImJ_T0095140.1 MGP_129S1SvImJ_G0035408.1 mouse_genomes_project 9 121644324 121747592 + Ctdspl protein_coding processed_transcript MGP_129S1SvImJ_T0095141.1 MGP_129S1SvImJ_G0035408.1 mouse_genomes_project 9 121746964 121754870 + Ctdspl protein_coding retained_intron MGP_129S1SvImJ_T0091368.1 MGP_129S1SvImJ_G0034428.1 mouse_genomes_project 9 18037814 18043458 + MGP_129S1SvImJ_P0091368 A230050P20Rik protein_coding protein_coding MGP_129S1SvImJ_T0091369.1 MGP_129S1SvImJ_G0034428.1 mouse_genomes_project 9 18037830 18043458 + A230050P20Rik protein_coding retained_intron MGP_129S1SvImJ_T0091370.1 MGP_129S1SvImJ_G0034428.1 mouse_genomes_project 9 18037852 18039270 + A230050P20Rik protein_coding processed_transcript MGP_129S1SvImJ_T0091371.1 MGP_129S1SvImJ_G0034428.1 mouse_genomes_project 9 18038451 18042946 + A230050P20Rik protein_coding retained_intron MGP_129S1SvImJ_T0091372.1 MGP_129S1SvImJ_G0034428.1 mouse_genomes_project 9 18039946 18042296 + A230050P20Rik protein_coding retained_intron MGP_129S1SvImJ_T0091461.1 MGP_129S1SvImJ_G0034463.1 mouse_genomes_project 9 19062190 19100012 - MGP_129S1SvImJ_P0091461 Dock6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091462.1 MGP_129S1SvImJ_G0034463.1 mouse_genomes_project 9 19062515 19119569 - MGP_129S1SvImJ_P0091462 Dock6 protein_coding protein_coding MGP_129S1SvImJ_T0091464.1 MGP_129S1SvImJ_G0034463.1 mouse_genomes_project 9 19102467 19119522 - MGP_129S1SvImJ_P0091464 Dock6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0093515.1 MGP_129S1SvImJ_G0035101.1 mouse_genomes_project 9 87883900 87888257 + MGP_129S1SvImJ_P0093515 Ripply2 protein_coding protein_coding MGP_129S1SvImJ_T0093516.1 MGP_129S1SvImJ_G0035101.1 mouse_genomes_project 9 87883999 87888256 + MGP_129S1SvImJ_P0093516 Ripply2 protein_coding protein_coding MGP_129S1SvImJ_T0095254.1 MGP_129S1SvImJ_G0035441.1 mouse_genomes_project 9 124306304 124392114 + MGP_129S1SvImJ_P0095254 Trak1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0095255.1 MGP_129S1SvImJ_G0035441.1 mouse_genomes_project 9 124310371 124411063 + MGP_129S1SvImJ_P0095255 Trak1 protein_coding protein_coding MGP_129S1SvImJ_T0101451.1 MGP_129S1SvImJ_G0039518.1 mouse_genomes_project 9 39047011 39047101 + Snord14e snoRNA snoRNA MGP_129S1SvImJ_T0100163.1 MGP_129S1SvImJ_G0038230.1 mouse_genomes_project 9 30199023 30199130 - Gm22060 snRNA snRNA MGP_129S1SvImJ_T0092116.1 MGP_129S1SvImJ_G0034729.1 mouse_genomes_project 9 43620748 43651315 + MGP_129S1SvImJ_P0092116 Amica1 protein_coding protein_coding MGP_129S1SvImJ_T0093523.1 MGP_129S1SvImJ_G0035104.1 mouse_genomes_project 9 88051486 88127084 - MGP_129S1SvImJ_P0093523 Cep162 protein_coding protein_coding MGP_129S1SvImJ_T0093524.1 MGP_129S1SvImJ_G0035104.1 mouse_genomes_project 9 88073555 88080767 - Cep162 protein_coding processed_transcript MGP_129S1SvImJ_T0093525.1 MGP_129S1SvImJ_G0035104.1 mouse_genomes_project 9 88097457 88100468 - Cep162 protein_coding retained_intron MGP_129S1SvImJ_T0093526.1 MGP_129S1SvImJ_G0035104.1 mouse_genomes_project 9 88098209 88126836 - Cep162 protein_coding retained_intron MGP_129S1SvImJ_T0095161.1 MGP_129S1SvImJ_G0035412.1 mouse_genomes_project 9 121861694 121878481 - MGP_129S1SvImJ_P0095161 Acaa1b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0100190.1 MGP_129S1SvImJ_G0038257.1 mouse_genomes_project 9 70633120 70633228 + Gm22229 snRNA snRNA MGP_129S1SvImJ_T0093762.1 MGP_129S1SvImJ_G0035154.1 mouse_genomes_project 9 99724424 99751750 + MGP_129S1SvImJ_P0093762 Rbp1 protein_coding protein_coding MGP_129S1SvImJ_T0095083.1 MGP_129S1SvImJ_G0035392.1 mouse_genomes_project 9 117143841 117183149 + MGP_129S1SvImJ_P0095083 Dync1li1 protein_coding protein_coding MGP_129S1SvImJ_T0016156.1 MGP_129S1SvImJ_G0014245.1 mouse_genomes_project 9 105523349 105523743 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011108.1 MGP_129S1SvImJ_G0009224.1 mouse_genomes_project 9 90729699 90729768 - Mir184 miRNA miRNA MGP_129S1SvImJ_T0094065.1 MGP_129S1SvImJ_G0035217.1 mouse_genomes_project 9 107424890 107577598 - MGP_129S1SvImJ_P0094065 protein_coding protein_coding MGP_129S1SvImJ_T0094066.1 MGP_129S1SvImJ_G0035217.1 mouse_genomes_project 9 107426510 107577523 - MGP_129S1SvImJ_P0094066 protein_coding protein_coding MGP_129S1SvImJ_T0094067.1 MGP_129S1SvImJ_G0035217.1 mouse_genomes_project 9 107518260 107555130 - MGP_129S1SvImJ_P0094067 protein_coding protein_coding MGP_129S1SvImJ_T0091851.1 MGP_129S1SvImJ_G0034618.1 mouse_genomes_project 9 37010089 37011016 + MGP_129S1SvImJ_P0091851 protein_coding protein_coding MGP_129S1SvImJ_T0092846.1 MGP_129S1SvImJ_G0034951.1 mouse_genomes_project 9 64925796 64955378 + MGP_129S1SvImJ_P0092846 Parp16 protein_coding protein_coding MGP_129S1SvImJ_T0016083.1 MGP_129S1SvImJ_G0014172.1 mouse_genomes_project 9 75420505 75421728 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0093271.1 MGP_129S1SvImJ_G0035051.1 mouse_genomes_project 9 77517448 77556408 - protein_coding retained_intron MGP_129S1SvImJ_T0093272.1 MGP_129S1SvImJ_G0035051.1 mouse_genomes_project 9 77517448 77773285 - MGP_129S1SvImJ_P0093272 protein_coding protein_coding MGP_129S1SvImJ_T0093273.1 MGP_129S1SvImJ_G0035051.1 mouse_genomes_project 9 77517448 77773278 - MGP_129S1SvImJ_P0093273 protein_coding protein_coding MGP_129S1SvImJ_T0093274.1 MGP_129S1SvImJ_G0035051.1 mouse_genomes_project 9 77517453 77773216 - MGP_129S1SvImJ_P0093274 protein_coding protein_coding MGP_129S1SvImJ_T0093275.1 MGP_129S1SvImJ_G0035051.1 mouse_genomes_project 9 77517453 77773208 - MGP_129S1SvImJ_P0093275 protein_coding protein_coding MGP_129S1SvImJ_T0093276.1 MGP_129S1SvImJ_G0035051.1 mouse_genomes_project 9 77517456 77773331 - MGP_129S1SvImJ_P0093276 protein_coding protein_coding MGP_129S1SvImJ_T0093277.1 MGP_129S1SvImJ_G0035051.1 mouse_genomes_project 9 77517456 77679531 - MGP_129S1SvImJ_P0093277 protein_coding protein_coding MGP_129S1SvImJ_T0093278.1 MGP_129S1SvImJ_G0035051.1 mouse_genomes_project 9 77517479 77556157 - MGP_129S1SvImJ_P0093278 protein_coding protein_coding MGP_129S1SvImJ_T0093279.1 MGP_129S1SvImJ_G0035051.1 mouse_genomes_project 9 77517677 77679577 - MGP_129S1SvImJ_P0093279 protein_coding protein_coding MGP_129S1SvImJ_T0093280.1 MGP_129S1SvImJ_G0035051.1 mouse_genomes_project 9 77517758 77679654 - MGP_129S1SvImJ_P0093280 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0093281.1 MGP_129S1SvImJ_G0035051.1 mouse_genomes_project 9 77579060 77773276 - MGP_129S1SvImJ_P0093281 protein_coding protein_coding MGP_129S1SvImJ_T0093282.1 MGP_129S1SvImJ_G0035051.1 mouse_genomes_project 9 77652041 77773266 - MGP_129S1SvImJ_P0093282 protein_coding protein_coding MGP_129S1SvImJ_T0093283.1 MGP_129S1SvImJ_G0035051.1 mouse_genomes_project 9 77652044 77679540 - MGP_129S1SvImJ_P0093283 protein_coding protein_coding MGP_129S1SvImJ_T0093284.1 MGP_129S1SvImJ_G0035051.1 mouse_genomes_project 9 77652072 77766041 - MGP_129S1SvImJ_P0093284 protein_coding protein_coding MGP_129S1SvImJ_T0093285.1 MGP_129S1SvImJ_G0035051.1 mouse_genomes_project 9 77676899 77679812 - protein_coding retained_intron MGP_129S1SvImJ_T0093286.1 MGP_129S1SvImJ_G0035051.1 mouse_genomes_project 9 77771840 77781609 - protein_coding processed_transcript MGP_129S1SvImJ_T0092839.1 MGP_129S1SvImJ_G0034948.1 mouse_genomes_project 9 64729608 64783960 + MGP_129S1SvImJ_P0092839 Dpp8 protein_coding protein_coding MGP_129S1SvImJ_T0092840.1 MGP_129S1SvImJ_G0034948.1 mouse_genomes_project 9 64729872 64782300 + MGP_129S1SvImJ_P0092840 Dpp8 protein_coding protein_coding MGP_129S1SvImJ_T0092841.1 MGP_129S1SvImJ_G0034948.1 mouse_genomes_project 9 64732146 64751415 + MGP_129S1SvImJ_P0092841 Dpp8 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0005446.1 MGP_129S1SvImJ_G0004614.1 mouse_genomes_project 9 30478964 30480484 - Gm27240 antisense antisense MGP_129S1SvImJ_T0018587.1 MGP_129S1SvImJ_G0015748.1 mouse_genomes_project 9 80450217 80450650 + Gm3211 processed_transcript processed_transcript MGP_129S1SvImJ_T0002477.1 MGP_129S1SvImJ_G0002386.1 mouse_genomes_project 9 109573086 109574285 + TEC TEC MGP_129S1SvImJ_T0095326.1 MGP_129S1SvImJ_G0035465.1 mouse_genomes_project 9 125895308 125907095 + MGP_129S1SvImJ_P0095326 Zkscan7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0092774.1 MGP_129S1SvImJ_G0034932.1 mouse_genomes_project 9 63258060 63370076 - MGP_129S1SvImJ_P0092774 Smad3 protein_coding protein_coding MGP_129S1SvImJ_T0092775.1 MGP_129S1SvImJ_G0034932.1 mouse_genomes_project 9 63266061 63277822 - MGP_129S1SvImJ_P0092775 Smad3 protein_coding protein_coding MGP_129S1SvImJ_T0092776.1 MGP_129S1SvImJ_G0034932.1 mouse_genomes_project 9 63266089 63322931 - MGP_129S1SvImJ_P0092776 Smad3 protein_coding protein_coding MGP_129S1SvImJ_T0092777.1 MGP_129S1SvImJ_G0034932.1 mouse_genomes_project 9 63277422 63363176 - MGP_129S1SvImJ_P0092777 Smad3 protein_coding protein_coding MGP_129S1SvImJ_T0092778.1 MGP_129S1SvImJ_G0034932.1 mouse_genomes_project 9 63279087 63353875 - Smad3 protein_coding processed_transcript MGP_129S1SvImJ_T0095396.1 MGP_129S1SvImJ_G0035489.1 mouse_genomes_project 9 127072790 127075231 - MGP_129S1SvImJ_P0095396 Ccr1 protein_coding protein_coding MGP_129S1SvImJ_T0091650.1 MGP_129S1SvImJ_G0034530.1 mouse_genomes_project 9 32989160 33004884 - MGP_129S1SvImJ_P0091650 Tirap protein_coding protein_coding MGP_129S1SvImJ_T0091651.1 MGP_129S1SvImJ_G0034530.1 mouse_genomes_project 9 32991411 33004581 - MGP_129S1SvImJ_P0091651 Tirap protein_coding protein_coding MGP_129S1SvImJ_T0091652.1 MGP_129S1SvImJ_G0034530.1 mouse_genomes_project 9 32991411 33004521 - MGP_129S1SvImJ_P0091652 Tirap protein_coding protein_coding MGP_129S1SvImJ_T0091653.1 MGP_129S1SvImJ_G0034530.1 mouse_genomes_project 9 32991973 33004563 - MGP_129S1SvImJ_P0091653 Tirap protein_coding protein_coding MGP_129S1SvImJ_T0091654.1 MGP_129S1SvImJ_G0034530.1 mouse_genomes_project 9 32993366 33004476 - MGP_129S1SvImJ_P0091654 Tirap protein_coding protein_coding MGP_129S1SvImJ_T0091655.1 MGP_129S1SvImJ_G0034530.1 mouse_genomes_project 9 32993663 32996038 - MGP_129S1SvImJ_P0091655 Tirap protein_coding protein_coding MGP_129S1SvImJ_T0091656.1 MGP_129S1SvImJ_G0034530.1 mouse_genomes_project 9 32995674 33004092 - MGP_129S1SvImJ_P0091656 Tirap protein_coding protein_coding MGP_129S1SvImJ_T0016074.1 MGP_129S1SvImJ_G0014163.1 mouse_genomes_project 9 72718976 72719184 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0016058.1 MGP_129S1SvImJ_G0014147.1 mouse_genomes_project 9 58446703 58448316 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0005586.1 MGP_129S1SvImJ_G0004713.1 mouse_genomes_project 9 126990570 126995142 + antisense antisense MGP_129S1SvImJ_T0009223.1 MGP_129S1SvImJ_G0007412.1 mouse_genomes_project 9 24668436 24669727 - lincRNA lincRNA MGP_129S1SvImJ_T0092267.1 MGP_129S1SvImJ_G0034784.1 mouse_genomes_project 9 49518398 49526100 + MGP_129S1SvImJ_P0092267 Pih1d2 protein_coding protein_coding MGP_129S1SvImJ_T0092268.1 MGP_129S1SvImJ_G0034784.1 mouse_genomes_project 9 49518410 49523612 + Pih1d2 protein_coding retained_intron MGP_129S1SvImJ_T0092269.1 MGP_129S1SvImJ_G0034784.1 mouse_genomes_project 9 49518414 49522861 + MGP_129S1SvImJ_P0092269 Pih1d2 protein_coding protein_coding MGP_129S1SvImJ_T0092270.1 MGP_129S1SvImJ_G0034784.1 mouse_genomes_project 9 49518460 49526103 + MGP_129S1SvImJ_P0092270 Pih1d2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092271.1 MGP_129S1SvImJ_G0034784.1 mouse_genomes_project 9 49518598 49519897 + Pih1d2 protein_coding retained_intron MGP_129S1SvImJ_T0092272.1 MGP_129S1SvImJ_G0034784.1 mouse_genomes_project 9 49518627 49522283 + MGP_129S1SvImJ_P0092272 Pih1d2 protein_coding protein_coding MGP_129S1SvImJ_T0092273.1 MGP_129S1SvImJ_G0034784.1 mouse_genomes_project 9 49519085 49522158 + MGP_129S1SvImJ_P0092273 Pih1d2 protein_coding protein_coding MGP_129S1SvImJ_T0009258.1 MGP_129S1SvImJ_G0007441.1 mouse_genomes_project 9 57660075 57663755 + 1700072B07Rik lincRNA lincRNA MGP_129S1SvImJ_T0094323.1 MGP_129S1SvImJ_G0035266.1 mouse_genomes_project 9 109539804 109549903 - MGP_129S1SvImJ_P0094323 Slc38a3 protein_coding protein_coding MGP_129S1SvImJ_T0094324.1 MGP_129S1SvImJ_G0035266.1 mouse_genomes_project 9 109540334 109559647 - MGP_129S1SvImJ_P0094324 Slc38a3 protein_coding protein_coding MGP_129S1SvImJ_T0094325.1 MGP_129S1SvImJ_G0035266.1 mouse_genomes_project 9 109540336 109561273 - Slc38a3 protein_coding retained_intron MGP_129S1SvImJ_T0094326.1 MGP_129S1SvImJ_G0035266.1 mouse_genomes_project 9 109540340 109559699 - MGP_129S1SvImJ_P0094326 Slc38a3 protein_coding protein_coding MGP_129S1SvImJ_T0094327.1 MGP_129S1SvImJ_G0035266.1 mouse_genomes_project 9 109540340 109561238 - MGP_129S1SvImJ_P0094327 Slc38a3 protein_coding protein_coding MGP_129S1SvImJ_T0094328.1 MGP_129S1SvImJ_G0035266.1 mouse_genomes_project 9 109545401 109547016 - MGP_129S1SvImJ_P0094328 Slc38a3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094329.1 MGP_129S1SvImJ_G0035266.1 mouse_genomes_project 9 109545431 109546603 - MGP_129S1SvImJ_P0094329 Slc38a3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094330.1 MGP_129S1SvImJ_G0035266.1 mouse_genomes_project 9 109545451 109546394 - Slc38a3 protein_coding retained_intron MGP_129S1SvImJ_T0094331.1 MGP_129S1SvImJ_G0035266.1 mouse_genomes_project 9 109546775 109547635 - Slc38a3 protein_coding retained_intron MGP_129S1SvImJ_T0094332.1 MGP_129S1SvImJ_G0035266.1 mouse_genomes_project 9 109547270 109549593 - Slc38a3 protein_coding processed_transcript MGP_129S1SvImJ_T0094333.1 MGP_129S1SvImJ_G0035266.1 mouse_genomes_project 9 109548003 109561791 - MGP_129S1SvImJ_P0094333 Slc38a3 protein_coding protein_coding MGP_129S1SvImJ_T0094334.1 MGP_129S1SvImJ_G0035266.1 mouse_genomes_project 9 109548184 109561270 - MGP_129S1SvImJ_P0094334 Slc38a3 protein_coding protein_coding MGP_129S1SvImJ_T0094335.1 MGP_129S1SvImJ_G0035266.1 mouse_genomes_project 9 109549009 109557693 - MGP_129S1SvImJ_P0094335 Slc38a3 protein_coding protein_coding MGP_129S1SvImJ_T0094336.1 MGP_129S1SvImJ_G0035266.1 mouse_genomes_project 9 109549592 109561283 - Slc38a3 protein_coding processed_transcript MGP_129S1SvImJ_T0094144.1 MGP_129S1SvImJ_G0035234.1 mouse_genomes_project 9 108281445 108291135 - MGP_129S1SvImJ_P0094144 Parp3 protein_coding protein_coding MGP_129S1SvImJ_T0094145.1 MGP_129S1SvImJ_G0035234.1 mouse_genomes_project 9 108281751 108290562 - MGP_129S1SvImJ_P0094145 Parp3 protein_coding protein_coding MGP_129S1SvImJ_T0094146.1 MGP_129S1SvImJ_G0035234.1 mouse_genomes_project 9 108282113 108290355 - Parp3 protein_coding retained_intron MGP_129S1SvImJ_T0094147.1 MGP_129S1SvImJ_G0035234.1 mouse_genomes_project 9 108282113 108290855 - MGP_129S1SvImJ_P0094147 Parp3 protein_coding protein_coding MGP_129S1SvImJ_T0094148.1 MGP_129S1SvImJ_G0035234.1 mouse_genomes_project 9 108282119 108283147 - Parp3 protein_coding retained_intron MGP_129S1SvImJ_T0094149.1 MGP_129S1SvImJ_G0035234.1 mouse_genomes_project 9 108285546 108290290 - MGP_129S1SvImJ_P0094149 Parp3 protein_coding protein_coding MGP_129S1SvImJ_T0094150.1 MGP_129S1SvImJ_G0035234.1 mouse_genomes_project 9 108285753 108290782 - Parp3 protein_coding retained_intron MGP_129S1SvImJ_T0094151.1 MGP_129S1SvImJ_G0035234.1 mouse_genomes_project 9 108285783 108290581 - MGP_129S1SvImJ_P0094151 Parp3 protein_coding protein_coding MGP_129S1SvImJ_T0011109.1 MGP_129S1SvImJ_G0009225.1 mouse_genomes_project 9 93316504 93316608 - Mir6386 miRNA miRNA MGP_129S1SvImJ_T0009311.1 MGP_129S1SvImJ_G0007483.1 mouse_genomes_project 9 94038660 94063788 - 1700034K08Rik lincRNA lincRNA MGP_129S1SvImJ_T0009312.1 MGP_129S1SvImJ_G0007483.1 mouse_genomes_project 9 94038660 94048776 - 1700034K08Rik lincRNA lincRNA MGP_129S1SvImJ_T0009313.1 MGP_129S1SvImJ_G0007483.1 mouse_genomes_project 9 94038741 94063794 - 1700034K08Rik lincRNA lincRNA MGP_129S1SvImJ_T0009314.1 MGP_129S1SvImJ_G0007483.1 mouse_genomes_project 9 94059737 94063785 - 1700034K08Rik lincRNA lincRNA MGP_129S1SvImJ_T0091867.1 MGP_129S1SvImJ_G0034634.1 mouse_genomes_project 9 37631501 37632437 - MGP_129S1SvImJ_P0091867 Olfr957 protein_coding protein_coding MGP_129S1SvImJ_T0092344.1 MGP_129S1SvImJ_G0034801.1 mouse_genomes_project 9 50559580 50563470 + MGP_129S1SvImJ_P0092344 Gm7293 protein_coding protein_coding MGP_129S1SvImJ_T0095397.1 MGP_129S1SvImJ_G0035490.1 mouse_genomes_project 9 127083884 127085344 - MGP_129S1SvImJ_P0095397 Ccr1l1 protein_coding protein_coding MGP_129S1SvImJ_T0093953.1 MGP_129S1SvImJ_G0035199.1 mouse_genomes_project 9 104970479 104981931 - MGP_129S1SvImJ_P0093953 Cdv3 protein_coding protein_coding MGP_129S1SvImJ_T0093954.1 MGP_129S1SvImJ_G0035199.1 mouse_genomes_project 9 104977920 104981293 - Cdv3 protein_coding retained_intron MGP_129S1SvImJ_T0016053.1 MGP_129S1SvImJ_G0014142.1 mouse_genomes_project 9 47860748 47861441 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095201.1 MGP_129S1SvImJ_G0035426.1 mouse_genomes_project 9 122733305 122747193 - MGP_129S1SvImJ_P0095201 Gorasp1 protein_coding protein_coding MGP_129S1SvImJ_T0002393.1 MGP_129S1SvImJ_G0002303.1 mouse_genomes_project 9 72467552 72469553 + TEC TEC MGP_129S1SvImJ_T0091526.1 MGP_129S1SvImJ_G0034492.1 mouse_genomes_project 9 21766597 21843332 - MGP_129S1SvImJ_P0091526 Dpy19l1 protein_coding protein_coding MGP_129S1SvImJ_T0091527.1 MGP_129S1SvImJ_G0034492.1 mouse_genomes_project 9 21766599 21859533 - MGP_129S1SvImJ_P0091527 Dpy19l1 protein_coding protein_coding MGP_129S1SvImJ_T0091528.1 MGP_129S1SvImJ_G0034492.1 mouse_genomes_project 9 21766624 21859533 - MGP_129S1SvImJ_P0091528 Dpy19l1 protein_coding protein_coding MGP_129S1SvImJ_T0091529.1 MGP_129S1SvImJ_G0034492.1 mouse_genomes_project 9 21766872 21779479 - Dpy19l1 protein_coding retained_intron MGP_129S1SvImJ_T0091530.1 MGP_129S1SvImJ_G0034492.1 mouse_genomes_project 9 21777808 21781938 - Dpy19l1 protein_coding retained_intron MGP_129S1SvImJ_T0091531.1 MGP_129S1SvImJ_G0034492.1 mouse_genomes_project 9 21836620 21853565 - Dpy19l1 protein_coding processed_transcript MGP_129S1SvImJ_T0009271.1 MGP_129S1SvImJ_G0007450.1 mouse_genomes_project 9 69769189 69851047 + B230323A14Rik lincRNA lincRNA MGP_129S1SvImJ_T0009272.1 MGP_129S1SvImJ_G0007450.1 mouse_genomes_project 9 69771590 69850401 + B230323A14Rik lincRNA lincRNA MGP_129S1SvImJ_T0093287.1 MGP_129S1SvImJ_G0035052.1 mouse_genomes_project 9 77864649 77985296 - MGP_129S1SvImJ_P0093287 Lrrc1 protein_coding protein_coding MGP_129S1SvImJ_T0093288.1 MGP_129S1SvImJ_G0035052.1 mouse_genomes_project 9 77864807 77984521 - MGP_129S1SvImJ_P0093288 Lrrc1 protein_coding protein_coding MGP_129S1SvImJ_T0093289.1 MGP_129S1SvImJ_G0035052.1 mouse_genomes_project 9 77864901 77884060 - Lrrc1 protein_coding processed_transcript MGP_129S1SvImJ_T0093290.1 MGP_129S1SvImJ_G0035052.1 mouse_genomes_project 9 77864916 77877568 - MGP_129S1SvImJ_P0093290 Lrrc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093291.1 MGP_129S1SvImJ_G0035052.1 mouse_genomes_project 9 77868880 77877864 - Lrrc1 protein_coding retained_intron MGP_129S1SvImJ_T0093292.1 MGP_129S1SvImJ_G0035052.1 mouse_genomes_project 9 77884065 77985276 - MGP_129S1SvImJ_P0093292 Lrrc1 protein_coding protein_coding MGP_129S1SvImJ_T0093293.1 MGP_129S1SvImJ_G0035052.1 mouse_genomes_project 9 77893422 77934728 - Lrrc1 protein_coding processed_transcript MGP_129S1SvImJ_T0093294.1 MGP_129S1SvImJ_G0035052.1 mouse_genomes_project 9 77907458 77985274 - Lrrc1 protein_coding processed_transcript MGP_129S1SvImJ_T0093295.1 MGP_129S1SvImJ_G0035052.1 mouse_genomes_project 9 77980938 77985216 - Lrrc1 protein_coding retained_intron MGP_129S1SvImJ_T0094933.1 MGP_129S1SvImJ_G0035355.1 mouse_genomes_project 9 112913837 112943762 + MGP_129S1SvImJ_P0094933 Myl3 protein_coding protein_coding MGP_129S1SvImJ_T0094934.1 MGP_129S1SvImJ_G0035355.1 mouse_genomes_project 9 112937017 112944057 + MGP_129S1SvImJ_P0094934 Myl3 protein_coding protein_coding MGP_129S1SvImJ_T0094935.1 MGP_129S1SvImJ_G0035355.1 mouse_genomes_project 9 112943043 112944406 + Myl3 protein_coding retained_intron MGP_129S1SvImJ_T0094003.1 MGP_129S1SvImJ_G0035209.1 mouse_genomes_project 9 106225439 106579995 + MGP_129S1SvImJ_P0094003 Cpne4 protein_coding protein_coding MGP_129S1SvImJ_T0094004.1 MGP_129S1SvImJ_G0035209.1 mouse_genomes_project 9 106245740 106579747 + MGP_129S1SvImJ_P0094004 Cpne4 protein_coding protein_coding MGP_129S1SvImJ_T0094005.1 MGP_129S1SvImJ_G0035209.1 mouse_genomes_project 9 106248556 106754358 + MGP_129S1SvImJ_P0094005 Cpne4 protein_coding protein_coding MGP_129S1SvImJ_T0094006.1 MGP_129S1SvImJ_G0035209.1 mouse_genomes_project 9 106248860 106754358 + MGP_129S1SvImJ_P0094006 Cpne4 protein_coding protein_coding MGP_129S1SvImJ_T0092485.1 MGP_129S1SvImJ_G0034849.1 mouse_genomes_project 9 55341597 55384812 - MGP_129S1SvImJ_P0092485 Peak1 protein_coding protein_coding MGP_129S1SvImJ_T0092486.1 MGP_129S1SvImJ_G0034849.1 mouse_genomes_project 9 55341598 55402633 - MGP_129S1SvImJ_P0092486 Peak1 protein_coding protein_coding MGP_129S1SvImJ_T0092487.1 MGP_129S1SvImJ_G0034849.1 mouse_genomes_project 9 55402547 55559880 - MGP_129S1SvImJ_P0092487 Peak1 protein_coding protein_coding MGP_129S1SvImJ_T0092488.1 MGP_129S1SvImJ_G0034849.1 mouse_genomes_project 9 55558534 55559888 - Peak1 protein_coding retained_intron MGP_129S1SvImJ_T0009246.1 MGP_129S1SvImJ_G0007431.1 mouse_genomes_project 9 43975712 43991770 - 4833428L15Rik lincRNA lincRNA MGP_129S1SvImJ_T0002423.1 MGP_129S1SvImJ_G0002332.1 mouse_genomes_project 9 87558066 87560597 + TEC TEC MGP_129S1SvImJ_T0016080.1 MGP_129S1SvImJ_G0014169.1 mouse_genomes_project 9 74830230 74830420 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011064.1 MGP_129S1SvImJ_G0009180.1 mouse_genomes_project 9 15130390 15130501 - Gm44498 miRNA miRNA MGP_129S1SvImJ_T0011769.1 MGP_129S1SvImJ_G0009885.1 mouse_genomes_project 9 120952168 120952475 + Gm22198 misc_RNA misc_RNA MGP_129S1SvImJ_T0095127.1 MGP_129S1SvImJ_G0035405.1 mouse_genomes_project 9 121157862 121165013 + MGP_129S1SvImJ_P0095127 Eomes protein_coding protein_coding MGP_129S1SvImJ_T0095128.1 MGP_129S1SvImJ_G0035405.1 mouse_genomes_project 9 121157994 121165779 + MGP_129S1SvImJ_P0095128 Eomes protein_coding protein_coding MGP_129S1SvImJ_T0095129.1 MGP_129S1SvImJ_G0035405.1 mouse_genomes_project 9 121158507 121162404 + MGP_129S1SvImJ_P0095129 Eomes protein_coding protein_coding MGP_129S1SvImJ_T0011134.1 MGP_129S1SvImJ_G0009250.1 mouse_genomes_project 9 125257109 125257248 - Mir8106 miRNA miRNA MGP_129S1SvImJ_T0009227.1 MGP_129S1SvImJ_G0007416.1 mouse_genomes_project 9 30784957 30842884 + lincRNA lincRNA MGP_129S1SvImJ_T0093319.1 MGP_129S1SvImJ_G0035061.1 mouse_genomes_project 9 78705403 78797433 + protein_coding retained_intron MGP_129S1SvImJ_T0093322.1 MGP_129S1SvImJ_G0035061.1 mouse_genomes_project 9 78747648 78762143 + MGP_129S1SvImJ_P0093322 protein_coding protein_coding MGP_129S1SvImJ_T0093323.1 MGP_129S1SvImJ_G0035061.1 mouse_genomes_project 9 78747648 78762142 + MGP_129S1SvImJ_P0093323 protein_coding protein_coding MGP_129S1SvImJ_T0093072.1 MGP_129S1SvImJ_G0035010.1 mouse_genomes_project 9 71622519 71714715 - Myzap protein_coding retained_intron MGP_129S1SvImJ_T0093073.1 MGP_129S1SvImJ_G0035010.1 mouse_genomes_project 9 71622519 71714715 - MGP_129S1SvImJ_P0093073 Myzap protein_coding protein_coding MGP_129S1SvImJ_T0093074.1 MGP_129S1SvImJ_G0035010.1 mouse_genomes_project 9 71623231 71714620 - MGP_129S1SvImJ_P0093074 Myzap protein_coding protein_coding MGP_129S1SvImJ_T0093075.1 MGP_129S1SvImJ_G0035010.1 mouse_genomes_project 9 71681756 71702268 - MGP_129S1SvImJ_P0093075 Myzap protein_coding protein_coding MGP_129S1SvImJ_T0093076.1 MGP_129S1SvImJ_G0035010.1 mouse_genomes_project 9 71685352 71714697 - MGP_129S1SvImJ_P0093076 Myzap protein_coding protein_coding MGP_129S1SvImJ_T0016144.1 MGP_129S1SvImJ_G0014233.1 mouse_genomes_project 9 100586069 100586589 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091367.1 MGP_129S1SvImJ_G0034427.1 mouse_genomes_project 9 17980025 17991946 + MGP_129S1SvImJ_P0091367 Rdh8 protein_coding protein_coding MGP_129S1SvImJ_T0095100.1 MGP_129S1SvImJ_G0035399.1 mouse_genomes_project 9 118475277 118642177 + MGP_129S1SvImJ_P0095100 Gadl1 protein_coding protein_coding MGP_129S1SvImJ_T0093183.1 MGP_129S1SvImJ_G0035025.1 mouse_genomes_project 9 73253814 73315687 + MGP_129S1SvImJ_P0093183 Rab27a protein_coding protein_coding MGP_129S1SvImJ_T0093184.1 MGP_129S1SvImJ_G0035025.1 mouse_genomes_project 9 73253817 73315651 + MGP_129S1SvImJ_P0093184 Rab27a protein_coding protein_coding MGP_129S1SvImJ_T0093185.1 MGP_129S1SvImJ_G0035025.1 mouse_genomes_project 9 73253944 73302432 + Rab27a protein_coding retained_intron MGP_129S1SvImJ_T0093186.1 MGP_129S1SvImJ_G0035025.1 mouse_genomes_project 9 73312891 73314473 + Rab27a protein_coding retained_intron MGP_129S1SvImJ_T0091646.1 MGP_129S1SvImJ_G0034528.1 mouse_genomes_project 9 32860535 32917436 - MGP_129S1SvImJ_P0091646 St3gal4 protein_coding protein_coding MGP_129S1SvImJ_T0091888.1 MGP_129S1SvImJ_G0034649.1 mouse_genomes_project 9 38006356 38007280 + MGP_129S1SvImJ_P0091888 Olfr971 protein_coding protein_coding MGP_129S1SvImJ_T0101475.1 MGP_129S1SvImJ_G0039542.1 mouse_genomes_project 9 86249454 86249590 + Gm25125 snoRNA snoRNA MGP_129S1SvImJ_T0091783.1 MGP_129S1SvImJ_G0034566.1 mouse_genomes_project 9 35525112 35537155 + MGP_129S1SvImJ_P0091783 Esam protein_coding protein_coding MGP_129S1SvImJ_T0091784.1 MGP_129S1SvImJ_G0034566.1 mouse_genomes_project 9 35525815 35535950 + MGP_129S1SvImJ_P0091784 Esam protein_coding protein_coding MGP_129S1SvImJ_T0091785.1 MGP_129S1SvImJ_G0034566.1 mouse_genomes_project 9 35527284 35528676 + MGP_129S1SvImJ_P0091785 Esam protein_coding protein_coding MGP_129S1SvImJ_T0091786.1 MGP_129S1SvImJ_G0034566.1 mouse_genomes_project 9 35527958 35533037 + MGP_129S1SvImJ_P0091786 Esam protein_coding protein_coding MGP_129S1SvImJ_T0091787.1 MGP_129S1SvImJ_G0034566.1 mouse_genomes_project 9 35535087 35536328 + Esam protein_coding retained_intron MGP_129S1SvImJ_T0016132.1 MGP_129S1SvImJ_G0014221.1 mouse_genomes_project 9 96536707 96537425 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002412.1 MGP_129S1SvImJ_G0002322.1 mouse_genomes_project 9 77146062 77150651 + TEC TEC MGP_129S1SvImJ_T0091705.1 MGP_129S1SvImJ_G0034544.1 mouse_genomes_project 9 33583022 33596424 - MGP_129S1SvImJ_P0091705 Gm27235 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0009251.1 MGP_129S1SvImJ_G0007434.1 mouse_genomes_project 9 47864417 47870007 - 1700042D02Rik lincRNA lincRNA MGP_129S1SvImJ_T0002488.1 MGP_129S1SvImJ_G0002397.1 mouse_genomes_project 9 112471465 112474052 - TEC TEC MGP_129S1SvImJ_T0092262.1 MGP_129S1SvImJ_G0034783.1 mouse_genomes_project 9 49504535 49518542 - MGP_129S1SvImJ_P0092262 AU019823 protein_coding protein_coding MGP_129S1SvImJ_T0092263.1 MGP_129S1SvImJ_G0034783.1 mouse_genomes_project 9 49504539 49518542 - MGP_129S1SvImJ_P0092263 AU019823 protein_coding protein_coding MGP_129S1SvImJ_T0092264.1 MGP_129S1SvImJ_G0034783.1 mouse_genomes_project 9 49508692 49518345 - MGP_129S1SvImJ_P0092264 AU019823 protein_coding protein_coding MGP_129S1SvImJ_T0092265.1 MGP_129S1SvImJ_G0034783.1 mouse_genomes_project 9 49508801 49518359 - MGP_129S1SvImJ_P0092265 AU019823 protein_coding protein_coding MGP_129S1SvImJ_T0092266.1 MGP_129S1SvImJ_G0034783.1 mouse_genomes_project 9 49508834 49518342 - MGP_129S1SvImJ_P0092266 AU019823 protein_coding protein_coding MGP_129S1SvImJ_T0016067.1 MGP_129S1SvImJ_G0014156.1 mouse_genomes_project 9 71965100 71965362 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091101.1 MGP_129S1SvImJ_G0034319.1 mouse_genomes_project 9 4129447 4140267 + MGP_129S1SvImJ_P0091101 Mmp13 protein_coding protein_coding MGP_129S1SvImJ_T0011097.1 MGP_129S1SvImJ_G0009213.1 mouse_genomes_project 9 64668047 64668172 - Gm25640 miRNA miRNA MGP_129S1SvImJ_T0091439.1 MGP_129S1SvImJ_G0034455.1 mouse_genomes_project 9 18747582 18771474 + MGP_129S1SvImJ_P0091439 AB124611 protein_coding protein_coding MGP_129S1SvImJ_T0091440.1 MGP_129S1SvImJ_G0034455.1 mouse_genomes_project 9 18747607 18771467 + MGP_129S1SvImJ_P0091440 AB124611 protein_coding protein_coding MGP_129S1SvImJ_T0091441.1 MGP_129S1SvImJ_G0034455.1 mouse_genomes_project 9 18747634 18771472 + MGP_129S1SvImJ_P0091441 AB124611 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093384.1 MGP_129S1SvImJ_G0035079.1 mouse_genomes_project 9 80734232 80897841 + MGP_129S1SvImJ_P0093384 Myo6 protein_coding protein_coding MGP_129S1SvImJ_T0093385.1 MGP_129S1SvImJ_G0035079.1 mouse_genomes_project 9 80734239 80738955 + Myo6 protein_coding retained_intron MGP_129S1SvImJ_T0093386.1 MGP_129S1SvImJ_G0035079.1 mouse_genomes_project 9 80734241 80897840 + MGP_129S1SvImJ_P0093386 Myo6 protein_coding protein_coding MGP_129S1SvImJ_T0093387.1 MGP_129S1SvImJ_G0035079.1 mouse_genomes_project 9 80734428 80894207 + MGP_129S1SvImJ_P0093387 Myo6 protein_coding protein_coding MGP_129S1SvImJ_T0093388.1 MGP_129S1SvImJ_G0035079.1 mouse_genomes_project 9 80796803 80894160 + MGP_129S1SvImJ_P0093388 Myo6 protein_coding protein_coding MGP_129S1SvImJ_T0093389.1 MGP_129S1SvImJ_G0035079.1 mouse_genomes_project 9 80796821 80897841 + MGP_129S1SvImJ_P0093389 Myo6 protein_coding protein_coding MGP_129S1SvImJ_T0093390.1 MGP_129S1SvImJ_G0035079.1 mouse_genomes_project 9 80796829 80897841 + MGP_129S1SvImJ_P0093390 Myo6 protein_coding protein_coding MGP_129S1SvImJ_T0093391.1 MGP_129S1SvImJ_G0035079.1 mouse_genomes_project 9 80845817 80851955 + Myo6 protein_coding retained_intron MGP_129S1SvImJ_T0093392.1 MGP_129S1SvImJ_G0035079.1 mouse_genomes_project 9 80870729 80871824 + Myo6 protein_coding retained_intron MGP_129S1SvImJ_T0093393.1 MGP_129S1SvImJ_G0035079.1 mouse_genomes_project 9 80871596 80877927 + Myo6 protein_coding retained_intron MGP_129S1SvImJ_T0093394.1 MGP_129S1SvImJ_G0035079.1 mouse_genomes_project 9 80891874 80893905 + Myo6 protein_coding processed_transcript MGP_129S1SvImJ_T0093395.1 MGP_129S1SvImJ_G0035079.1 mouse_genomes_project 9 80893023 80894713 + Myo6 protein_coding retained_intron MGP_129S1SvImJ_T0091565.1 MGP_129S1SvImJ_G0034505.1 mouse_genomes_project 9 24464931 24491988 - MGP_129S1SvImJ_P0091565 Vps26b protein_coding protein_coding MGP_129S1SvImJ_T0009259.1 MGP_129S1SvImJ_G0007442.1 mouse_genomes_project 9 57748314 57763872 + 4930461G14Rik lincRNA lincRNA MGP_129S1SvImJ_T0002429.1 MGP_129S1SvImJ_G0002338.1 mouse_genomes_project 9 90163338 90167217 - TEC TEC MGP_129S1SvImJ_T0101485.1 MGP_129S1SvImJ_G0039552.1 mouse_genomes_project 9 98711315 98711442 - Gm25607 snoRNA snoRNA MGP_129S1SvImJ_T0091849.1 MGP_129S1SvImJ_G0034616.1 mouse_genomes_project 9 36907711 36908779 + MGP_129S1SvImJ_P0091849 Olfr923 protein_coding protein_coding MGP_129S1SvImJ_T0011111.1 MGP_129S1SvImJ_G0009227.1 mouse_genomes_project 9 103863163 103863215 - Mir7243 miRNA miRNA MGP_129S1SvImJ_T0101775.1 MGP_129S1SvImJ_G0039753.1 mouse_genomes_project 9 11805746 11807167 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0018544.1 MGP_129S1SvImJ_G0015734.1 mouse_genomes_project 9 38530636 38552244 + 1700110K17Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0018545.1 MGP_129S1SvImJ_G0015734.1 mouse_genomes_project 9 38540674 38552238 + 1700110K17Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0091839.1 MGP_129S1SvImJ_G0034612.1 mouse_genomes_project 9 36781748 36806826 + MGP_129S1SvImJ_P0091839 Vwa5a protein_coding protein_coding MGP_129S1SvImJ_T0091840.1 MGP_129S1SvImJ_G0034612.1 mouse_genomes_project 9 36781752 36806251 + MGP_129S1SvImJ_P0091840 Vwa5a protein_coding protein_coding MGP_129S1SvImJ_T0091841.1 MGP_129S1SvImJ_G0034612.1 mouse_genomes_project 9 36782518 36786097 + MGP_129S1SvImJ_P0091841 Vwa5a protein_coding protein_coding MGP_129S1SvImJ_T0091842.1 MGP_129S1SvImJ_G0034612.1 mouse_genomes_project 9 36791972 36798208 + Vwa5a protein_coding retained_intron MGP_129S1SvImJ_T0091843.1 MGP_129S1SvImJ_G0034612.1 mouse_genomes_project 9 36797999 36799635 + Vwa5a protein_coding retained_intron MGP_129S1SvImJ_T0091844.1 MGP_129S1SvImJ_G0034612.1 mouse_genomes_project 9 36799475 36801479 + Vwa5a protein_coding retained_intron MGP_129S1SvImJ_T0091845.1 MGP_129S1SvImJ_G0034612.1 mouse_genomes_project 9 36799673 36805409 + MGP_129S1SvImJ_P0091845 Vwa5a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094941.1 MGP_129S1SvImJ_G0035358.1 mouse_genomes_project 9 113013086 113018221 + MGP_129S1SvImJ_P0094941 Prss43 protein_coding protein_coding MGP_129S1SvImJ_T0100173.1 MGP_129S1SvImJ_G0038240.1 mouse_genomes_project 9 46262778 46262885 - Gm22286 snRNA snRNA MGP_129S1SvImJ_T0016101.1 MGP_129S1SvImJ_G0014190.1 mouse_genomes_project 9 84150699 84151087 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009215.1 MGP_129S1SvImJ_G0007404.1 mouse_genomes_project 9 17571062 17705741 + lincRNA lincRNA MGP_129S1SvImJ_T0098660.1 MGP_129S1SvImJ_G0036745.1 mouse_genomes_project 9 33316677 33316785 - Gm24188 rRNA rRNA MGP_129S1SvImJ_T0009291.1 MGP_129S1SvImJ_G0007468.1 mouse_genomes_project 9 82910627 82913824 + 1700063H06Rik lincRNA lincRNA MGP_129S1SvImJ_T0094514.1 MGP_129S1SvImJ_G0035292.1 mouse_genomes_project 9 110251489 110286979 + MGP_129S1SvImJ_P0094514 Rhoa protein_coding protein_coding MGP_129S1SvImJ_T0094515.1 MGP_129S1SvImJ_G0035292.1 mouse_genomes_project 9 110251799 110256901 + Rhoa protein_coding retained_intron MGP_129S1SvImJ_T0094516.1 MGP_129S1SvImJ_G0035292.1 mouse_genomes_project 9 110252157 110286148 + MGP_129S1SvImJ_P0094516 Rhoa protein_coding protein_coding MGP_129S1SvImJ_T0094517.1 MGP_129S1SvImJ_G0035292.1 mouse_genomes_project 9 110252189 110279465 + MGP_129S1SvImJ_P0094517 Rhoa protein_coding protein_coding MGP_129S1SvImJ_T0094518.1 MGP_129S1SvImJ_G0035292.1 mouse_genomes_project 9 110279108 110286165 + Rhoa protein_coding retained_intron MGP_129S1SvImJ_T0005509.1 MGP_129S1SvImJ_G0004656.1 mouse_genomes_project 9 84103822 84129724 + Gm2087 antisense antisense MGP_129S1SvImJ_T0100182.1 MGP_129S1SvImJ_G0038249.1 mouse_genomes_project 9 64911408 64911524 - Rnu5g snRNA snRNA MGP_129S1SvImJ_T0091893.1 MGP_129S1SvImJ_G0034654.1 mouse_genomes_project 9 38127077 38130890 - MGP_129S1SvImJ_P0091893 Olfr976 protein_coding protein_coding MGP_129S1SvImJ_T0011113.1 MGP_129S1SvImJ_G0009229.1 mouse_genomes_project 9 106711619 106711723 + Gm23391 miRNA miRNA MGP_129S1SvImJ_T0009316.1 MGP_129S1SvImJ_G0007485.1 mouse_genomes_project 9 97628878 97631241 - BC043934 lincRNA lincRNA MGP_129S1SvImJ_T0009317.1 MGP_129S1SvImJ_G0007485.1 mouse_genomes_project 9 97628879 97630537 - BC043934 lincRNA lincRNA MGP_129S1SvImJ_T0009355.1 MGP_129S1SvImJ_G0007515.1 mouse_genomes_project 9 120546885 120554944 + Gm26614 lincRNA lincRNA MGP_129S1SvImJ_T0092641.1 MGP_129S1SvImJ_G0034898.1 mouse_genomes_project 9 58642499 58679999 - MGP_129S1SvImJ_P0092641 Bbs4 protein_coding protein_coding MGP_129S1SvImJ_T0092986.1 MGP_129S1SvImJ_G0034989.1 mouse_genomes_project 9 67759953 67920826 + MGP_129S1SvImJ_P0092986 Vps13c protein_coding protein_coding MGP_129S1SvImJ_T0092987.1 MGP_129S1SvImJ_G0034989.1 mouse_genomes_project 9 67759984 67908530 + MGP_129S1SvImJ_P0092987 Vps13c protein_coding unknown_likely_coding MGP_129S1SvImJ_T0005565.1 MGP_129S1SvImJ_G0004696.1 mouse_genomes_project 9 111052420 111056366 - Gm7628 antisense antisense MGP_129S1SvImJ_T0092494.1 MGP_129S1SvImJ_G0034853.1 mouse_genomes_project 9 56023343 56058106 + MGP_129S1SvImJ_P0092494 Cspg4 protein_coding protein_coding MGP_129S1SvImJ_T0091303.1 MGP_129S1SvImJ_G0034402.1 mouse_genomes_project 9 16875199 16876033 + MGP_129S1SvImJ_P0091303 protein_coding protein_coding MGP_129S1SvImJ_T0009248.1 MGP_129S1SvImJ_G0007433.1 mouse_genomes_project 9 45602543 45617773 + 2900052N01Rik lincRNA lincRNA MGP_129S1SvImJ_T0009249.1 MGP_129S1SvImJ_G0007433.1 mouse_genomes_project 9 45602653 45617773 + 2900052N01Rik lincRNA lincRNA MGP_129S1SvImJ_T0009250.1 MGP_129S1SvImJ_G0007433.1 mouse_genomes_project 9 45602677 45612974 + 2900052N01Rik lincRNA lincRNA MGP_129S1SvImJ_T0092182.1 MGP_129S1SvImJ_G0034748.1 mouse_genomes_project 9 44858666 44860553 + MGP_129S1SvImJ_P0092182 Apoa1 protein_coding protein_coding MGP_129S1SvImJ_T0092183.1 MGP_129S1SvImJ_G0034748.1 mouse_genomes_project 9 44858807 44860060 + Apoa1 protein_coding retained_intron MGP_129S1SvImJ_T0093330.1 MGP_129S1SvImJ_G0035066.1 mouse_genomes_project 9 78821588 78823594 + MGP_129S1SvImJ_P0093330 protein_coding protein_coding MGP_129S1SvImJ_T0093331.1 MGP_129S1SvImJ_G0035066.1 mouse_genomes_project 9 78822029 78823618 + MGP_129S1SvImJ_P0093331 protein_coding protein_coding MGP_129S1SvImJ_T0093332.1 MGP_129S1SvImJ_G0035066.1 mouse_genomes_project 9 78822053 78823094 + protein_coding retained_intron MGP_129S1SvImJ_T0093333.1 MGP_129S1SvImJ_G0035066.1 mouse_genomes_project 9 78822053 78822565 + MGP_129S1SvImJ_P0093333 protein_coding protein_coding MGP_129S1SvImJ_T0093335.1 MGP_129S1SvImJ_G0035066.1 mouse_genomes_project 9 78822179 78823441 + MGP_129S1SvImJ_P0093335 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0005510.1 MGP_129S1SvImJ_G0004657.1 mouse_genomes_project 9 87541488 87547272 + A330041J22Rik antisense antisense MGP_129S1SvImJ_T0094071.1 MGP_129S1SvImJ_G0035219.1 mouse_genomes_project 9 107754607 107763419 - Col6a4 protein_coding processed_transcript MGP_129S1SvImJ_T0094072.1 MGP_129S1SvImJ_G0035219.1 mouse_genomes_project 9 107755618 107868235 - MGP_129S1SvImJ_P0094072 Col6a4 protein_coding protein_coding MGP_129S1SvImJ_T0094073.1 MGP_129S1SvImJ_G0035219.1 mouse_genomes_project 9 107841321 107842671 - Col6a4 protein_coding processed_transcript MGP_129S1SvImJ_T0011078.1 MGP_129S1SvImJ_G0009194.1 mouse_genomes_project 9 39833376 39833472 + Mirlet7a-2 miRNA miRNA MGP_129S1SvImJ_T0005526.1 MGP_129S1SvImJ_G0004666.1 mouse_genomes_project 9 98259375 98265449 + Gm16010 antisense antisense MGP_129S1SvImJ_T0005527.1 MGP_129S1SvImJ_G0004666.1 mouse_genomes_project 9 98260883 98261855 + Gm16010 antisense antisense MGP_129S1SvImJ_T0011121.1 MGP_129S1SvImJ_G0009237.1 mouse_genomes_project 9 110536142 110536227 + Mir425 miRNA miRNA MGP_129S1SvImJ_T0095077.1 MGP_129S1SvImJ_G0035386.1 mouse_genomes_project 9 116816402 116902834 + MGP_129S1SvImJ_P0095077 Glb1 protein_coding protein_coding MGP_129S1SvImJ_T0091260.1 MGP_129S1SvImJ_G0034371.1 mouse_genomes_project 9 15307314 15329043 + MGP_129S1SvImJ_P0091260 Chordc1 protein_coding protein_coding MGP_129S1SvImJ_T0016091.1 MGP_129S1SvImJ_G0014180.1 mouse_genomes_project 9 77722237 77722639 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0094822.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112214977 112250103 - MGP_129S1SvImJ_P0094822 Dhx30 protein_coding protein_coding MGP_129S1SvImJ_T0094823.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112214977 112249706 - MGP_129S1SvImJ_P0094823 Dhx30 protein_coding protein_coding MGP_129S1SvImJ_T0094824.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112214977 112249695 - MGP_129S1SvImJ_P0094824 Dhx30 protein_coding protein_coding MGP_129S1SvImJ_T0094825.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112214977 112231711 - MGP_129S1SvImJ_P0094825 Dhx30 protein_coding protein_coding MGP_129S1SvImJ_T0094826.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112214978 112242446 - Dhx30 protein_coding retained_intron MGP_129S1SvImJ_T0094827.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112214978 112215649 - MGP_129S1SvImJ_P0094827 Dhx30 protein_coding protein_coding MGP_129S1SvImJ_T0094828.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112214978 112249710 - MGP_129S1SvImJ_P0094828 Dhx30 protein_coding protein_coding MGP_129S1SvImJ_T0094829.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112214978 112247350 - MGP_129S1SvImJ_P0094829 Dhx30 protein_coding protein_coding MGP_129S1SvImJ_T0094830.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112214978 112215708 - MGP_129S1SvImJ_P0094830 Dhx30 protein_coding protein_coding MGP_129S1SvImJ_T0094831.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112214979 112249684 - MGP_129S1SvImJ_P0094831 Dhx30 protein_coding protein_coding MGP_129S1SvImJ_T0094832.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112214980 112249608 - MGP_129S1SvImJ_P0094832 Dhx30 protein_coding protein_coding MGP_129S1SvImJ_T0094833.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112215175 112216173 - MGP_129S1SvImJ_P0094833 Dhx30 protein_coding protein_coding MGP_129S1SvImJ_T0094834.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112216976 112218112 - Dhx30 protein_coding retained_intron MGP_129S1SvImJ_T0094835.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112218600 112222118 - Dhx30 protein_coding retained_intron MGP_129S1SvImJ_T0094836.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112220447 112242921 - Dhx30 protein_coding retained_intron MGP_129S1SvImJ_T0094837.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112223606 112231663 - MGP_129S1SvImJ_P0094837 Dhx30 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094838.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112223714 112249057 - MGP_129S1SvImJ_P0094838 Dhx30 protein_coding protein_coding MGP_129S1SvImJ_T0094839.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112223756 112231662 - MGP_129S1SvImJ_P0094839 Dhx30 protein_coding protein_coding MGP_129S1SvImJ_T0094840.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112229374 112247579 - MGP_129S1SvImJ_P0094840 Dhx30 protein_coding protein_coding MGP_129S1SvImJ_T0094841.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112229462 112249360 - MGP_129S1SvImJ_P0094841 Dhx30 protein_coding protein_coding MGP_129S1SvImJ_T0094842.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112241564 112249692 - MGP_129S1SvImJ_P0094842 Dhx30 protein_coding protein_coding MGP_129S1SvImJ_T0094843.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112245350 112249704 - Dhx30 protein_coding processed_transcript MGP_129S1SvImJ_T0094844.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112246448 112249647 - Dhx30 protein_coding retained_intron MGP_129S1SvImJ_T0094845.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112247386 112249905 - Dhx30 protein_coding processed_transcript MGP_129S1SvImJ_T0094846.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112247694 112249381 - Dhx30 protein_coding processed_transcript MGP_129S1SvImJ_T0094847.1 MGP_129S1SvImJ_G0035341.1 mouse_genomes_project 9 112247763 112249658 - Dhx30 protein_coding processed_transcript MGP_129S1SvImJ_T0091859.1 MGP_129S1SvImJ_G0034626.1 mouse_genomes_project 9 37219047 37220033 + MGP_129S1SvImJ_P0091859 Olfr27 protein_coding protein_coding MGP_129S1SvImJ_T0009339.1 MGP_129S1SvImJ_G0007505.1 mouse_genomes_project 9 109478686 109484279 - lincRNA lincRNA MGP_129S1SvImJ_T0094393.1 MGP_129S1SvImJ_G0035271.1 mouse_genomes_project 9 109801784 109816771 + MGP_129S1SvImJ_P0094393 Mon1a protein_coding protein_coding MGP_129S1SvImJ_T0094394.1 MGP_129S1SvImJ_G0035271.1 mouse_genomes_project 9 109801815 109816776 + MGP_129S1SvImJ_P0094394 Mon1a protein_coding protein_coding MGP_129S1SvImJ_T0002383.1 MGP_129S1SvImJ_G0002293.1 mouse_genomes_project 9 55555872 55557906 - TEC TEC MGP_129S1SvImJ_T0016054.1 MGP_129S1SvImJ_G0014143.1 mouse_genomes_project 9 49050345 49051348 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002475.1 MGP_129S1SvImJ_G0002384.1 mouse_genomes_project 9 107866939 107869905 + TEC TEC MGP_129S1SvImJ_T0100183.1 MGP_129S1SvImJ_G0038250.1 mouse_genomes_project 9 65696656 65696763 + Gm23248 snRNA snRNA MGP_129S1SvImJ_T0091145.1 MGP_129S1SvImJ_G0034334.1 mouse_genomes_project 9 5117153 5137517 + MGP_129S1SvImJ_P0091145 1700128F08Rik protein_coding protein_coding MGP_129S1SvImJ_T0101429.1 MGP_129S1SvImJ_G0039496.1 mouse_genomes_project 9 12297369 12297440 + Gm24299 snoRNA snoRNA MGP_129S1SvImJ_T0016134.1 MGP_129S1SvImJ_G0014223.1 mouse_genomes_project 9 96806806 96807395 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091846.1 MGP_129S1SvImJ_G0034613.1 mouse_genomes_project 9 36816284 36820352 + MGP_129S1SvImJ_P0091846 Olfr920 protein_coding protein_coding MGP_129S1SvImJ_T0093123.1 MGP_129S1SvImJ_G0035014.1 mouse_genomes_project 9 72600848 72611568 + MGP_129S1SvImJ_P0093123 Mns1 protein_coding protein_coding MGP_129S1SvImJ_T0093124.1 MGP_129S1SvImJ_G0035014.1 mouse_genomes_project 9 72601359 72615498 + MGP_129S1SvImJ_P0093124 Mns1 protein_coding protein_coding MGP_129S1SvImJ_T0093125.1 MGP_129S1SvImJ_G0035014.1 mouse_genomes_project 9 72601368 72624811 + MGP_129S1SvImJ_P0093125 Mns1 protein_coding protein_coding MGP_129S1SvImJ_T0091532.1 MGP_129S1SvImJ_G0034493.1 mouse_genomes_project 9 21914991 22077040 - MGP_129S1SvImJ_P0091532 Dpy19l2 protein_coding protein_coding MGP_129S1SvImJ_T0091533.1 MGP_129S1SvImJ_G0034493.1 mouse_genomes_project 9 21915980 22076811 - MGP_129S1SvImJ_P0091533 Dpy19l2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0009217.1 MGP_129S1SvImJ_G0007406.1 mouse_genomes_project 9 18217063 18220556 - Gm26592 lincRNA lincRNA MGP_129S1SvImJ_T0011127.1 MGP_129S1SvImJ_G0009243.1 mouse_genomes_project 9 113117892 113117969 + Gm24269 miRNA miRNA MGP_129S1SvImJ_T0016064.1 MGP_129S1SvImJ_G0014153.1 mouse_genomes_project 9 65020146 65020534 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0094713.1 MGP_129S1SvImJ_G0035319.1 mouse_genomes_project 9 110933441 110934596 + MGP_129S1SvImJ_P0094713 Ucn2 protein_coding protein_coding MGP_129S1SvImJ_T0092201.1 MGP_129S1SvImJ_G0034754.1 mouse_genomes_project 9 44937366 44955292 - MGP_129S1SvImJ_P0092201 4931429L15Rik protein_coding protein_coding MGP_129S1SvImJ_T0092202.1 MGP_129S1SvImJ_G0034754.1 mouse_genomes_project 9 44938024 44946903 - MGP_129S1SvImJ_P0092202 4931429L15Rik protein_coding protein_coding MGP_129S1SvImJ_T0092203.1 MGP_129S1SvImJ_G0034754.1 mouse_genomes_project 9 44945614 44951262 - MGP_129S1SvImJ_P0092203 4931429L15Rik protein_coding protein_coding MGP_129S1SvImJ_T0095163.1 MGP_129S1SvImJ_G0035414.1 mouse_genomes_project 9 121893902 121916702 - MGP_129S1SvImJ_P0095163 Slc22a14 protein_coding protein_coding MGP_129S1SvImJ_T0095164.1 MGP_129S1SvImJ_G0035414.1 mouse_genomes_project 9 121893903 122134184 - MGP_129S1SvImJ_P0095164 Slc22a14 protein_coding protein_coding MGP_129S1SvImJ_T0095165.1 MGP_129S1SvImJ_G0035414.1 mouse_genomes_project 9 121894115 121898084 - MGP_129S1SvImJ_P0095165 Slc22a14 protein_coding protein_coding MGP_129S1SvImJ_T0095166.1 MGP_129S1SvImJ_G0035414.1 mouse_genomes_project 9 121905397 121916657 - MGP_129S1SvImJ_P0095166 Slc22a14 protein_coding protein_coding MGP_129S1SvImJ_T0092001.1 MGP_129S1SvImJ_G0034694.1 mouse_genomes_project 9 42606885 42705763 - MGP_129S1SvImJ_P0092001 Cbl protein_coding protein_coding MGP_129S1SvImJ_T0092002.1 MGP_129S1SvImJ_G0034694.1 mouse_genomes_project 9 42606886 42705703 - MGP_129S1SvImJ_P0092002 Cbl protein_coding protein_coding MGP_129S1SvImJ_T0092003.1 MGP_129S1SvImJ_G0034694.1 mouse_genomes_project 9 42606891 42610974 - Cbl protein_coding processed_transcript MGP_129S1SvImJ_T0092004.1 MGP_129S1SvImJ_G0034694.1 mouse_genomes_project 9 42614086 42705710 - MGP_129S1SvImJ_P0092004 Cbl protein_coding protein_coding MGP_129S1SvImJ_T0092005.1 MGP_129S1SvImJ_G0034694.1 mouse_genomes_project 9 42617317 42705698 - MGP_129S1SvImJ_P0092005 Cbl protein_coding protein_coding MGP_129S1SvImJ_T0092006.1 MGP_129S1SvImJ_G0034694.1 mouse_genomes_project 9 42618956 42620156 - MGP_129S1SvImJ_P0092006 Cbl protein_coding protein_coding MGP_129S1SvImJ_T0092007.1 MGP_129S1SvImJ_G0034694.1 mouse_genomes_project 9 42619515 42620129 - Cbl protein_coding retained_intron MGP_129S1SvImJ_T0092008.1 MGP_129S1SvImJ_G0034694.1 mouse_genomes_project 9 42619675 42622949 - Cbl protein_coding retained_intron MGP_129S1SvImJ_T0092009.1 MGP_129S1SvImJ_G0034694.1 mouse_genomes_project 9 42625941 42633031 - MGP_129S1SvImJ_P0092009 Cbl protein_coding protein_coding MGP_129S1SvImJ_T0092010.1 MGP_129S1SvImJ_G0034694.1 mouse_genomes_project 9 42638118 42656761 - Cbl protein_coding processed_transcript MGP_129S1SvImJ_T0092011.1 MGP_129S1SvImJ_G0034694.1 mouse_genomes_project 9 42642461 42705255 - MGP_129S1SvImJ_P0092011 Cbl protein_coding protein_coding MGP_129S1SvImJ_T0100217.1 MGP_129S1SvImJ_G0038284.1 mouse_genomes_project 9 113281656 113281719 + Gm26409 snRNA snRNA MGP_129S1SvImJ_T0009292.1 MGP_129S1SvImJ_G0007469.1 mouse_genomes_project 9 83902699 83916057 - Gm27216 lincRNA lincRNA MGP_129S1SvImJ_T0009293.1 MGP_129S1SvImJ_G0007469.1 mouse_genomes_project 9 83902709 83916575 - Gm27216 lincRNA lincRNA MGP_129S1SvImJ_T0009294.1 MGP_129S1SvImJ_G0007469.1 mouse_genomes_project 9 83902726 83916522 - Gm27216 lincRNA lincRNA MGP_129S1SvImJ_T0016129.1 MGP_129S1SvImJ_G0014218.1 mouse_genomes_project 9 95528180 95528754 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091707.1 MGP_129S1SvImJ_G0034546.1 mouse_genomes_project 9 33594372 33596435 - MGP_129S1SvImJ_P0091707 D730048I06Rik protein_coding protein_coding MGP_129S1SvImJ_T0018563.1 MGP_129S1SvImJ_G0015738.1 mouse_genomes_project 9 56225832 56241281 - Gm10658 processed_transcript processed_transcript MGP_129S1SvImJ_T0018564.1 MGP_129S1SvImJ_G0015738.1 mouse_genomes_project 9 56226405 56241440 - Gm10658 processed_transcript processed_transcript MGP_129S1SvImJ_T0093405.1 MGP_129S1SvImJ_G0035084.1 mouse_genomes_project 9 83523247 83632558 - MGP_129S1SvImJ_P0093405 Phip protein_coding unknown_likely_coding MGP_129S1SvImJ_T0093406.1 MGP_129S1SvImJ_G0035084.1 mouse_genomes_project 9 83523253 83632783 - MGP_129S1SvImJ_P0093406 Phip protein_coding protein_coding MGP_129S1SvImJ_T0093407.1 MGP_129S1SvImJ_G0035084.1 mouse_genomes_project 9 83527416 83553345 - Phip protein_coding retained_intron MGP_129S1SvImJ_T0093408.1 MGP_129S1SvImJ_G0035084.1 mouse_genomes_project 9 83545997 83549283 - Phip protein_coding retained_intron MGP_129S1SvImJ_T0093409.1 MGP_129S1SvImJ_G0035084.1 mouse_genomes_project 9 83551125 83632675 - Phip protein_coding retained_intron MGP_129S1SvImJ_T0093410.1 MGP_129S1SvImJ_G0035084.1 mouse_genomes_project 9 83551611 83553065 - Phip protein_coding retained_intron MGP_129S1SvImJ_T0093411.1 MGP_129S1SvImJ_G0035084.1 mouse_genomes_project 9 83554137 83558086 - Phip protein_coding retained_intron MGP_129S1SvImJ_T0093412.1 MGP_129S1SvImJ_G0035084.1 mouse_genomes_project 9 83557628 83589520 - MGP_129S1SvImJ_P0093412 Phip protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093413.1 MGP_129S1SvImJ_G0035084.1 mouse_genomes_project 9 83560415 83566066 - Phip protein_coding retained_intron MGP_129S1SvImJ_T0093414.1 MGP_129S1SvImJ_G0035084.1 mouse_genomes_project 9 83570179 83632693 - Phip protein_coding retained_intron MGP_129S1SvImJ_T0093415.1 MGP_129S1SvImJ_G0035084.1 mouse_genomes_project 9 83570791 83584064 - MGP_129S1SvImJ_P0093415 Phip protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093416.1 MGP_129S1SvImJ_G0035084.1 mouse_genomes_project 9 83572910 83574699 - Phip protein_coding retained_intron MGP_129S1SvImJ_T0093417.1 MGP_129S1SvImJ_G0035084.1 mouse_genomes_project 9 83582792 83585096 - Phip protein_coding retained_intron MGP_129S1SvImJ_T0093418.1 MGP_129S1SvImJ_G0035084.1 mouse_genomes_project 9 83584102 83630669 - MGP_129S1SvImJ_P0093418 Phip protein_coding protein_coding MGP_129S1SvImJ_T0093419.1 MGP_129S1SvImJ_G0035084.1 mouse_genomes_project 9 83586910 83589977 - Phip protein_coding retained_intron MGP_129S1SvImJ_T0093420.1 MGP_129S1SvImJ_G0035084.1 mouse_genomes_project 9 83601312 83632683 - Phip protein_coding retained_intron MGP_129S1SvImJ_T0093421.1 MGP_129S1SvImJ_G0035084.1 mouse_genomes_project 9 83612611 83632686 - Phip protein_coding retained_intron MGP_129S1SvImJ_T0002371.1 MGP_129S1SvImJ_G0002281.1 mouse_genomes_project 9 27631746 27678828 - TEC TEC MGP_129S1SvImJ_T0092613.1 MGP_129S1SvImJ_G0034888.1 mouse_genomes_project 9 57526722 57536865 + MGP_129S1SvImJ_P0092613 Stoml1 protein_coding protein_coding MGP_129S1SvImJ_T0011092.1 MGP_129S1SvImJ_G0009208.1 mouse_genomes_project 9 57493208 57493313 + Mir6385 miRNA miRNA MGP_129S1SvImJ_T0093791.1 MGP_129S1SvImJ_G0035167.1 mouse_genomes_project 9 100612871 100634908 + MGP_129S1SvImJ_P0093791 Cep70 protein_coding protein_coding MGP_129S1SvImJ_T0093792.1 MGP_129S1SvImJ_G0035167.1 mouse_genomes_project 9 100612946 100665393 + MGP_129S1SvImJ_P0093792 Cep70 protein_coding protein_coding MGP_129S1SvImJ_T0093793.1 MGP_129S1SvImJ_G0035167.1 mouse_genomes_project 9 100612957 100624377 + Cep70 protein_coding retained_intron MGP_129S1SvImJ_T0093794.1 MGP_129S1SvImJ_G0035167.1 mouse_genomes_project 9 100612965 100636074 + MGP_129S1SvImJ_P0093794 Cep70 protein_coding protein_coding MGP_129S1SvImJ_T0093795.1 MGP_129S1SvImJ_G0035167.1 mouse_genomes_project 9 100612967 100662974 + MGP_129S1SvImJ_P0093795 Cep70 protein_coding protein_coding MGP_129S1SvImJ_T0093796.1 MGP_129S1SvImJ_G0035167.1 mouse_genomes_project 9 100612986 100633779 + MGP_129S1SvImJ_P0093796 Cep70 protein_coding protein_coding MGP_129S1SvImJ_T0093797.1 MGP_129S1SvImJ_G0035167.1 mouse_genomes_project 9 100613030 100643122 + MGP_129S1SvImJ_P0093797 Cep70 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093798.1 MGP_129S1SvImJ_G0035167.1 mouse_genomes_project 9 100615791 100634212 + Cep70 protein_coding retained_intron MGP_129S1SvImJ_T0093799.1 MGP_129S1SvImJ_G0035167.1 mouse_genomes_project 9 100656450 100661340 + Cep70 protein_coding retained_intron MGP_129S1SvImJ_T0092826.1 MGP_129S1SvImJ_G0034943.1 mouse_genomes_project 9 64396599 64419071 - MGP_129S1SvImJ_P0092826 Rab11a protein_coding protein_coding MGP_129S1SvImJ_T0092827.1 MGP_129S1SvImJ_G0034943.1 mouse_genomes_project 9 64396701 64405817 - Rab11a protein_coding retained_intron MGP_129S1SvImJ_T0092828.1 MGP_129S1SvImJ_G0034943.1 mouse_genomes_project 9 64396802 64406807 - MGP_129S1SvImJ_P0092828 Rab11a protein_coding protein_coding MGP_129S1SvImJ_T0092829.1 MGP_129S1SvImJ_G0034943.1 mouse_genomes_project 9 64396866 64406550 - Rab11a protein_coding processed_transcript MGP_129S1SvImJ_T0092830.1 MGP_129S1SvImJ_G0034943.1 mouse_genomes_project 9 64396945 64418952 - MGP_129S1SvImJ_P0092830 Rab11a protein_coding protein_coding MGP_129S1SvImJ_T0092831.1 MGP_129S1SvImJ_G0034943.1 mouse_genomes_project 9 64397039 64418952 - MGP_129S1SvImJ_P0092831 Rab11a protein_coding protein_coding MGP_129S1SvImJ_T0092832.1 MGP_129S1SvImJ_G0034943.1 mouse_genomes_project 9 64397049 64419081 - MGP_129S1SvImJ_P0092832 Rab11a protein_coding protein_coding MGP_129S1SvImJ_T0092833.1 MGP_129S1SvImJ_G0034943.1 mouse_genomes_project 9 64406787 64417844 - Rab11a protein_coding processed_transcript MGP_129S1SvImJ_T0091269.1 MGP_129S1SvImJ_G0034373.1 mouse_genomes_project 9 15430763 15439103 + MGP_129S1SvImJ_P0091269 Ubtfl1 protein_coding protein_coding MGP_129S1SvImJ_T0091270.1 MGP_129S1SvImJ_G0034373.1 mouse_genomes_project 9 15430765 15438926 + MGP_129S1SvImJ_P0091270 Ubtfl1 protein_coding protein_coding MGP_129S1SvImJ_T0091271.1 MGP_129S1SvImJ_G0034373.1 mouse_genomes_project 9 15435888 15437537 + MGP_129S1SvImJ_P0091271 Ubtfl1 protein_coding protein_coding MGP_129S1SvImJ_T0009242.1 MGP_129S1SvImJ_G0007428.1 mouse_genomes_project 9 42571500 42580015 + Gm26737 lincRNA lincRNA MGP_129S1SvImJ_T0009334.1 MGP_129S1SvImJ_G0007501.1 mouse_genomes_project 9 106026347 106050489 + Gm28548 lincRNA lincRNA MGP_129S1SvImJ_T0092303.1 MGP_129S1SvImJ_G0034791.1 mouse_genomes_project 9 49669372 49673892 + Fdxacb1 protein_coding retained_intron MGP_129S1SvImJ_T0092304.1 MGP_129S1SvImJ_G0034791.1 mouse_genomes_project 9 49669385 49672814 + MGP_129S1SvImJ_P0092304 Fdxacb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092305.1 MGP_129S1SvImJ_G0034791.1 mouse_genomes_project 9 49669386 49673830 + MGP_129S1SvImJ_P0092305 Fdxacb1 protein_coding protein_coding MGP_129S1SvImJ_T0092307.1 MGP_129S1SvImJ_G0034791.1 mouse_genomes_project 9 49671204 49672760 + MGP_129S1SvImJ_P0092307 Fdxacb1 protein_coding protein_coding MGP_129S1SvImJ_T0092536.1 MGP_129S1SvImJ_G0034863.1 mouse_genomes_project 9 56437288 56447613 - MGP_129S1SvImJ_P0092536 1700017B05Rik protein_coding protein_coding MGP_129S1SvImJ_T0009343.1 MGP_129S1SvImJ_G0007508.1 mouse_genomes_project 9 110938645 110939002 - Gm38004 lincRNA lincRNA MGP_129S1SvImJ_T0100200.1 MGP_129S1SvImJ_G0038267.1 mouse_genomes_project 9 85375933 85376097 + Gm26126 snRNA snRNA MGP_129S1SvImJ_T0094229.1 MGP_129S1SvImJ_G0035251.1 mouse_genomes_project 9 109197016 109205676 + MGP_129S1SvImJ_P0094229 6430571L13Rik protein_coding protein_coding MGP_129S1SvImJ_T0094230.1 MGP_129S1SvImJ_G0035251.1 mouse_genomes_project 9 109204143 109209451 + 6430571L13Rik protein_coding processed_transcript MGP_129S1SvImJ_T0002463.1 MGP_129S1SvImJ_G0002372.1 mouse_genomes_project 9 104275731 104278548 - TEC TEC MGP_129S1SvImJ_T0018622.1 MGP_129S1SvImJ_G0015762.1 mouse_genomes_project 9 113184685 113205077 + Gm10030 processed_transcript antisense MGP_129S1SvImJ_T0018623.1 MGP_129S1SvImJ_G0015762.1 mouse_genomes_project 9 113197421 113203573 + Gm10030 processed_transcript retained_intron MGP_129S1SvImJ_T0018624.1 MGP_129S1SvImJ_G0015762.1 mouse_genomes_project 9 113201858 113203878 + Gm10030 processed_transcript processed_transcript MGP_129S1SvImJ_T0091812.1 MGP_129S1SvImJ_G0034585.1 mouse_genomes_project 9 36165305 36166234 + MGP_129S1SvImJ_P0091812 Olfr889 protein_coding protein_coding MGP_129S1SvImJ_T0094442.1 MGP_129S1SvImJ_G0035280.1 mouse_genomes_project 9 109912636 109969877 + Gm20662 protein_coding retained_intron MGP_129S1SvImJ_T0094447.1 MGP_129S1SvImJ_G0035280.1 mouse_genomes_project 9 109914276 109952992 + MGP_129S1SvImJ_P0094447 Gm20662 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094448.1 MGP_129S1SvImJ_G0035280.1 mouse_genomes_project 9 109914314 109952984 + MGP_129S1SvImJ_P0094448 Gm20662 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092408.1 MGP_129S1SvImJ_G0034827.1 mouse_genomes_project 9 53656600 53713956 - MGP_129S1SvImJ_P0092408 Acsbg1 protein_coding protein_coding MGP_129S1SvImJ_T0092409.1 MGP_129S1SvImJ_G0034827.1 mouse_genomes_project 9 53680633 53694978 - MGP_129S1SvImJ_P0092409 Acsbg1 protein_coding protein_coding MGP_129S1SvImJ_T0092410.1 MGP_129S1SvImJ_G0034827.1 mouse_genomes_project 9 53680659 53699165 - MGP_129S1SvImJ_P0092410 Acsbg1 protein_coding protein_coding MGP_129S1SvImJ_T0092411.1 MGP_129S1SvImJ_G0034827.1 mouse_genomes_project 9 53680679 53713781 - MGP_129S1SvImJ_P0092411 Acsbg1 protein_coding protein_coding MGP_129S1SvImJ_T0092412.1 MGP_129S1SvImJ_G0034827.1 mouse_genomes_project 9 53698001 53699036 - Acsbg1 protein_coding retained_intron MGP_129S1SvImJ_T0005508.1 MGP_129S1SvImJ_G0004655.1 mouse_genomes_project 9 82399441 82491077 - Gm26907 antisense antisense MGP_129S1SvImJ_T0093045.1 MGP_129S1SvImJ_G0035002.1 mouse_genomes_project 9 70701607 70764471 - MGP_129S1SvImJ_P0093045 Fam63b protein_coding protein_coding MGP_129S1SvImJ_T0093459.1 MGP_129S1SvImJ_G0035091.1 mouse_genomes_project 9 86077829 86084731 - MGP_129S1SvImJ_P0093459 Fam46a protein_coding protein_coding MGP_129S1SvImJ_T0093460.1 MGP_129S1SvImJ_G0035091.1 mouse_genomes_project 9 86077829 86084507 - MGP_129S1SvImJ_P0093460 Fam46a protein_coding protein_coding MGP_129S1SvImJ_T0009239.1 MGP_129S1SvImJ_G0007425.1 mouse_genomes_project 9 38744889 38747365 + Gm17540 lincRNA lincRNA MGP_129S1SvImJ_T0100153.1 MGP_129S1SvImJ_G0038220.1 mouse_genomes_project 9 6177545 6177607 + Gm22815 snRNA snRNA MGP_129S1SvImJ_T0002424.1 MGP_129S1SvImJ_G0002333.1 mouse_genomes_project 9 87639863 87642168 - TEC TEC MGP_129S1SvImJ_T0005478.1 MGP_129S1SvImJ_G0004634.1 mouse_genomes_project 9 57297677 57314388 + Gm16130 antisense antisense MGP_129S1SvImJ_T0091805.1 MGP_129S1SvImJ_G0034579.1 mouse_genomes_project 9 36032689 36033637 + MGP_129S1SvImJ_P0091805 Olfr881 protein_coding protein_coding MGP_129S1SvImJ_T0002442.1 MGP_129S1SvImJ_G0002351.1 mouse_genomes_project 9 98554207 98556087 + TEC TEC MGP_129S1SvImJ_T0098665.1 MGP_129S1SvImJ_G0036750.1 mouse_genomes_project 9 65629728 65629841 + n-R5s85 rRNA rRNA MGP_129S1SvImJ_T0091249.1 MGP_129S1SvImJ_G0034366.1 mouse_genomes_project 9 12495749 12539416 + MGP_129S1SvImJ_P0091249 Smco4 protein_coding protein_coding MGP_129S1SvImJ_T0091250.1 MGP_129S1SvImJ_G0034366.1 mouse_genomes_project 9 12512629 12539413 + MGP_129S1SvImJ_P0091250 Smco4 protein_coding protein_coding MGP_129S1SvImJ_T0092232.1 MGP_129S1SvImJ_G0034766.1 mouse_genomes_project 9 47729659 47758987 - MGP_129S1SvImJ_P0092232 Htr3b protein_coding protein_coding MGP_129S1SvImJ_T0101461.1 MGP_129S1SvImJ_G0039528.1 mouse_genomes_project 9 63821642 63821712 + Gm22571 snoRNA snoRNA MGP_129S1SvImJ_T0092280.1 MGP_129S1SvImJ_G0034786.1 mouse_genomes_project 9 49562742 49627927 - MGP_129S1SvImJ_P0092280 Dixdc1 protein_coding protein_coding MGP_129S1SvImJ_T0092281.1 MGP_129S1SvImJ_G0034786.1 mouse_genomes_project 9 49562746 49599557 - Dixdc1 protein_coding retained_intron MGP_129S1SvImJ_T0092282.1 MGP_129S1SvImJ_G0034786.1 mouse_genomes_project 9 49562746 49628019 - MGP_129S1SvImJ_P0092282 Dixdc1 protein_coding protein_coding MGP_129S1SvImJ_T0092283.1 MGP_129S1SvImJ_G0034786.1 mouse_genomes_project 9 49566183 49596959 - Dixdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0092284.1 MGP_129S1SvImJ_G0034786.1 mouse_genomes_project 9 49566183 49598780 - MGP_129S1SvImJ_P0092284 Dixdc1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0092285.1 MGP_129S1SvImJ_G0034786.1 mouse_genomes_project 9 49566183 49639265 - MGP_129S1SvImJ_P0092285 Dixdc1 protein_coding protein_coding MGP_129S1SvImJ_T0092286.1 MGP_129S1SvImJ_G0034786.1 mouse_genomes_project 9 49566247 49584809 - Dixdc1 protein_coding retained_intron MGP_129S1SvImJ_T0092287.1 MGP_129S1SvImJ_G0034786.1 mouse_genomes_project 9 49577105 49594021 - MGP_129S1SvImJ_P0092287 Dixdc1 protein_coding protein_coding MGP_129S1SvImJ_T0092288.1 MGP_129S1SvImJ_G0034786.1 mouse_genomes_project 9 49590337 49599632 - Dixdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0092289.1 MGP_129S1SvImJ_G0034786.1 mouse_genomes_project 9 49593689 49598835 - Dixdc1 protein_coding retained_intron MGP_129S1SvImJ_T0092290.1 MGP_129S1SvImJ_G0034786.1 mouse_genomes_project 9 49593867 49597971 - Dixdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0092291.1 MGP_129S1SvImJ_G0034786.1 mouse_genomes_project 9 49609498 49639195 - MGP_129S1SvImJ_P0092291 Dixdc1 protein_coding protein_coding MGP_129S1SvImJ_T0092292.1 MGP_129S1SvImJ_G0034786.1 mouse_genomes_project 9 49610002 49627890 - MGP_129S1SvImJ_P0092292 Dixdc1 protein_coding protein_coding MGP_129S1SvImJ_T0091089.1 MGP_129S1SvImJ_G0034315.1 mouse_genomes_project 9 3007957 3234490 + MGP_129S1SvImJ_P0091089 Pdgfd protein_coding protein_coding MGP_129S1SvImJ_T0091090.1 MGP_129S1SvImJ_G0034315.1 mouse_genomes_project 9 3008006 3235809 + MGP_129S1SvImJ_P0091090 Pdgfd protein_coding protein_coding MGP_129S1SvImJ_T0092363.1 MGP_129S1SvImJ_G0034809.1 mouse_genomes_project 9 52401589 52421901 + MGP_129S1SvImJ_P0092363 Kdelc2 protein_coding protein_coding MGP_129S1SvImJ_T0018610.1 MGP_129S1SvImJ_G0015757.1 mouse_genomes_project 9 103289122 103380595 - Gm29521 processed_transcript lincRNA MGP_129S1SvImJ_T0018611.1 MGP_129S1SvImJ_G0015757.1 mouse_genomes_project 9 103377426 103380637 - Gm29521 processed_transcript retained_intron MGP_129S1SvImJ_T0009318.1 MGP_129S1SvImJ_G0007486.1 mouse_genomes_project 9 97715609 97722387 - lincRNA lincRNA MGP_129S1SvImJ_T0091717.1 MGP_129S1SvImJ_G0034553.1 mouse_genomes_project 9 34594485 34600103 + MGP_129S1SvImJ_P0091717 Acrv1 protein_coding protein_coding MGP_129S1SvImJ_T0091718.1 MGP_129S1SvImJ_G0034553.1 mouse_genomes_project 9 34594519 34598625 + Acrv1 protein_coding retained_intron MGP_129S1SvImJ_T0093262.1 MGP_129S1SvImJ_G0035047.1 mouse_genomes_project 9 76520672 76574476 - MGP_129S1SvImJ_P0093262 Gfral protein_coding protein_coding MGP_129S1SvImJ_T0093263.1 MGP_129S1SvImJ_G0035047.1 mouse_genomes_project 9 76520672 76574476 - MGP_129S1SvImJ_P0093263 Gfral protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095318.1 MGP_129S1SvImJ_G0035461.1 mouse_genomes_project 9 125747404 125802834 + MGP_129S1SvImJ_P0095318 Topaz1 protein_coding protein_coding MGP_129S1SvImJ_T0092160.1 MGP_129S1SvImJ_G0034744.1 mouse_genomes_project 9 44533913 44541909 - MGP_129S1SvImJ_P0092160 Tagln protein_coding protein_coding MGP_129S1SvImJ_T0094519.1 MGP_129S1SvImJ_G0035293.1 mouse_genomes_project 9 110289204 110290104 + Gpx1 protein_coding retained_intron MGP_129S1SvImJ_T0094520.1 MGP_129S1SvImJ_G0035293.1 mouse_genomes_project 9 110289355 110290645 + MGP_129S1SvImJ_P0094520 Gpx1 protein_coding protein_coding MGP_129S1SvImJ_T0094521.1 MGP_129S1SvImJ_G0035293.1 mouse_genomes_project 9 110289544 110290552 + MGP_129S1SvImJ_P0094521 Gpx1 protein_coding protein_coding MGP_129S1SvImJ_T0094522.1 MGP_129S1SvImJ_G0035293.1 mouse_genomes_project 9 110289577 110290552 + MGP_129S1SvImJ_P0094522 Gpx1 protein_coding protein_coding MGP_129S1SvImJ_T0100207.1 MGP_129S1SvImJ_G0038274.1 mouse_genomes_project 9 95765447 95765543 + Gm24178 snRNA snRNA MGP_129S1SvImJ_T0005499.1 MGP_129S1SvImJ_G0004650.1 mouse_genomes_project 9 78899616 78900816 - 4930542C12Rik antisense antisense MGP_129S1SvImJ_T0091470.1 MGP_129S1SvImJ_G0034466.1 mouse_genomes_project 9 19194492 19200574 - MGP_129S1SvImJ_P0091470 Tmem205 protein_coding protein_coding MGP_129S1SvImJ_T0091471.1 MGP_129S1SvImJ_G0034466.1 mouse_genomes_project 9 19194492 19200574 - MGP_129S1SvImJ_P0091471 Tmem205 protein_coding protein_coding MGP_129S1SvImJ_T0009241.1 MGP_129S1SvImJ_G0007427.1 mouse_genomes_project 9 41868541 41869437 + Gm28215 lincRNA lincRNA MGP_129S1SvImJ_T0016089.1 MGP_129S1SvImJ_G0014178.1 mouse_genomes_project 9 77399584 77399822 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0094166.1 MGP_129S1SvImJ_G0035239.1 mouse_genomes_project 9 108386081 108388619 - MGP_129S1SvImJ_P0094166 Iqcf4 protein_coding protein_coding MGP_129S1SvImJ_T0091865.1 MGP_129S1SvImJ_G0034632.1 mouse_genomes_project 9 37497039 37497984 + MGP_129S1SvImJ_P0091865 Olfr951 protein_coding protein_coding MGP_129S1SvImJ_T0094399.1 MGP_129S1SvImJ_G0035273.1 mouse_genomes_project 9 109843388 109847381 + MGP_129S1SvImJ_P0094399 Actl11 protein_coding protein_coding MGP_129S1SvImJ_T0093789.1 MGP_129S1SvImJ_G0035166.1 mouse_genomes_project 9 100597529 100606744 - MGP_129S1SvImJ_P0093789 Faiml protein_coding protein_coding MGP_129S1SvImJ_T0093790.1 MGP_129S1SvImJ_G0035166.1 mouse_genomes_project 9 100597621 100605875 - MGP_129S1SvImJ_P0093790 Faiml protein_coding protein_coding MGP_129S1SvImJ_T0093691.1 MGP_129S1SvImJ_G0035142.1 mouse_genomes_project 9 97369347 97500907 + MGP_129S1SvImJ_P0093691 Tfdp2 protein_coding protein_coding MGP_129S1SvImJ_T0093692.1 MGP_129S1SvImJ_G0035142.1 mouse_genomes_project 9 97369366 97500914 + MGP_129S1SvImJ_P0093692 Tfdp2 protein_coding protein_coding MGP_129S1SvImJ_T0093693.1 MGP_129S1SvImJ_G0035142.1 mouse_genomes_project 9 97369378 97501924 + MGP_129S1SvImJ_P0093693 Tfdp2 protein_coding protein_coding MGP_129S1SvImJ_T0093694.1 MGP_129S1SvImJ_G0035142.1 mouse_genomes_project 9 97369410 97420607 + Tfdp2 protein_coding processed_transcript MGP_129S1SvImJ_T0093695.1 MGP_129S1SvImJ_G0035142.1 mouse_genomes_project 9 97375169 97475850 + MGP_129S1SvImJ_P0093695 Tfdp2 protein_coding protein_coding MGP_129S1SvImJ_T0093696.1 MGP_129S1SvImJ_G0035142.1 mouse_genomes_project 9 97432649 97492585 + MGP_129S1SvImJ_P0093696 Tfdp2 protein_coding protein_coding MGP_129S1SvImJ_T0093697.1 MGP_129S1SvImJ_G0035142.1 mouse_genomes_project 9 97432686 97466004 + MGP_129S1SvImJ_P0093697 Tfdp2 protein_coding protein_coding MGP_129S1SvImJ_T0093698.1 MGP_129S1SvImJ_G0035142.1 mouse_genomes_project 9 97432703 97500910 + MGP_129S1SvImJ_P0093698 Tfdp2 protein_coding protein_coding MGP_129S1SvImJ_T0093699.1 MGP_129S1SvImJ_G0035142.1 mouse_genomes_project 9 97434737 97501848 + MGP_129S1SvImJ_P0093699 Tfdp2 protein_coding protein_coding MGP_129S1SvImJ_T0093700.1 MGP_129S1SvImJ_G0035142.1 mouse_genomes_project 9 97469255 97472406 + Tfdp2 protein_coding retained_intron MGP_129S1SvImJ_T0093701.1 MGP_129S1SvImJ_G0035142.1 mouse_genomes_project 9 97487082 97490233 + Tfdp2 protein_coding retained_intron MGP_129S1SvImJ_T0093702.1 MGP_129S1SvImJ_G0035142.1 mouse_genomes_project 9 97492568 97500846 + MGP_129S1SvImJ_P0093702 Tfdp2 protein_coding protein_coding MGP_129S1SvImJ_T0101474.1 MGP_129S1SvImJ_G0039541.1 mouse_genomes_project 9 82898333 82898464 + Gm23748 snoRNA snoRNA MGP_129S1SvImJ_T0092667.1 MGP_129S1SvImJ_G0034907.1 mouse_genomes_project 9 59123573 59316608 + MGP_129S1SvImJ_P0092667 Myo9a protein_coding protein_coding MGP_129S1SvImJ_T0092668.1 MGP_129S1SvImJ_G0034907.1 mouse_genomes_project 9 59123573 59316608 + MGP_129S1SvImJ_P0092668 Myo9a protein_coding protein_coding MGP_129S1SvImJ_T0092669.1 MGP_129S1SvImJ_G0034907.1 mouse_genomes_project 9 59123573 59316608 + MGP_129S1SvImJ_P0092669 Myo9a protein_coding protein_coding MGP_129S1SvImJ_T0092670.1 MGP_129S1SvImJ_G0034907.1 mouse_genomes_project 9 59253533 59270376 + Myo9a protein_coding processed_transcript MGP_129S1SvImJ_T0092671.1 MGP_129S1SvImJ_G0034907.1 mouse_genomes_project 9 59283455 59293132 + Myo9a protein_coding retained_intron MGP_129S1SvImJ_T0092672.1 MGP_129S1SvImJ_G0034907.1 mouse_genomes_project 9 59292704 59297508 + Myo9a protein_coding retained_intron MGP_129S1SvImJ_T0092673.1 MGP_129S1SvImJ_G0034907.1 mouse_genomes_project 9 59293957 59299431 + Myo9a protein_coding retained_intron MGP_129S1SvImJ_T0092674.1 MGP_129S1SvImJ_G0034907.1 mouse_genomes_project 9 59296755 59297798 + Myo9a protein_coding retained_intron MGP_129S1SvImJ_T0091810.1 MGP_129S1SvImJ_G0034583.1 mouse_genomes_project 9 36132927 36133857 + MGP_129S1SvImJ_P0091810 Olfr887 protein_coding protein_coding MGP_129S1SvImJ_T0095360.1 MGP_129S1SvImJ_G0035479.1 mouse_genomes_project 9 126647245 126689174 - MGP_129S1SvImJ_P0095360 Slc6a20b protein_coding protein_coding MGP_129S1SvImJ_T0095361.1 MGP_129S1SvImJ_G0035479.1 mouse_genomes_project 9 126648317 126685161 - Slc6a20b protein_coding processed_transcript MGP_129S1SvImJ_T0095362.1 MGP_129S1SvImJ_G0035479.1 mouse_genomes_project 9 126648323 126688936 - MGP_129S1SvImJ_P0095362 Slc6a20b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095363.1 MGP_129S1SvImJ_G0035479.1 mouse_genomes_project 9 126663309 126688892 - MGP_129S1SvImJ_P0095363 Slc6a20b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095364.1 MGP_129S1SvImJ_G0035479.1 mouse_genomes_project 9 126664915 126689110 - Slc6a20b protein_coding processed_transcript MGP_129S1SvImJ_T0093317.1 MGP_129S1SvImJ_G0035059.1 mouse_genomes_project 9 78662738 78680099 + MGP_129S1SvImJ_P0093317 Gsta4 protein_coding protein_coding MGP_129S1SvImJ_T0091884.1 MGP_129S1SvImJ_G0034645.1 mouse_genomes_project 9 37895516 37896449 + MGP_129S1SvImJ_P0091884 Olfr967 protein_coding protein_coding MGP_129S1SvImJ_T0002492.1 MGP_129S1SvImJ_G0002401.1 mouse_genomes_project 9 113253285 113253698 - TEC TEC MGP_129S1SvImJ_T0092012.1 MGP_129S1SvImJ_G0034695.1 mouse_genomes_project 9 42712348 42719013 + MGP_129S1SvImJ_P0092012 Ccdc153 protein_coding protein_coding MGP_129S1SvImJ_T0091413.1 MGP_129S1SvImJ_G0034448.1 mouse_genomes_project 9 18488595 18491340 - MGP_129S1SvImJ_P0091413 Cdkn2d protein_coding protein_coding MGP_129S1SvImJ_T0091847.1 MGP_129S1SvImJ_G0034614.1 mouse_genomes_project 9 36842840 36846109 + MGP_129S1SvImJ_P0091847 Olfr921 protein_coding protein_coding MGP_129S1SvImJ_T0093998.1 MGP_129S1SvImJ_G0035208.1 mouse_genomes_project 9 105947824 105999915 - MGP_129S1SvImJ_P0093998 Acpp protein_coding protein_coding MGP_129S1SvImJ_T0093999.1 MGP_129S1SvImJ_G0035208.1 mouse_genomes_project 9 105950557 105960746 - Acpp protein_coding processed_transcript MGP_129S1SvImJ_T0094000.1 MGP_129S1SvImJ_G0035208.1 mouse_genomes_project 9 105958520 105999894 - MGP_129S1SvImJ_P0094000 Acpp protein_coding protein_coding MGP_129S1SvImJ_T0094001.1 MGP_129S1SvImJ_G0035208.1 mouse_genomes_project 9 105966194 105999869 - Acpp protein_coding retained_intron MGP_129S1SvImJ_T0094002.1 MGP_129S1SvImJ_G0035208.1 mouse_genomes_project 9 105979094 105999894 - Acpp protein_coding retained_intron MGP_129S1SvImJ_T0016082.1 MGP_129S1SvImJ_G0014171.1 mouse_genomes_project 9 75385704 75386247 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091834.1 MGP_129S1SvImJ_G0034607.1 mouse_genomes_project 9 36660135 36661086 + MGP_129S1SvImJ_P0091834 Olfr914 protein_coding protein_coding MGP_129S1SvImJ_T0092233.1 MGP_129S1SvImJ_G0034767.1 mouse_genomes_project 9 47783678 47855673 + MGP_129S1SvImJ_P0092233 Usp28 protein_coding protein_coding MGP_129S1SvImJ_T0092234.1 MGP_129S1SvImJ_G0034767.1 mouse_genomes_project 9 47783735 47855670 + MGP_129S1SvImJ_P0092234 Usp28 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0002419.1 MGP_129S1SvImJ_G0002329.1 mouse_genomes_project 9 86529029 86530381 + TEC TEC MGP_129S1SvImJ_T0009322.1 MGP_129S1SvImJ_G0007490.1 mouse_genomes_project 9 100064868 100140265 - E330023G01Rik lincRNA lincRNA MGP_129S1SvImJ_T0002461.1 MGP_129S1SvImJ_G0002370.1 mouse_genomes_project 9 103728423 103732792 + TEC TEC MGP_129S1SvImJ_T0093051.1 MGP_129S1SvImJ_G0035005.1 mouse_genomes_project 9 70913092 71053163 - MGP_129S1SvImJ_P0093051 Lipc protein_coding protein_coding MGP_129S1SvImJ_T0093052.1 MGP_129S1SvImJ_G0035005.1 mouse_genomes_project 9 70913230 70941939 - MGP_129S1SvImJ_P0093052 Lipc protein_coding unknown_likely_coding MGP_129S1SvImJ_T0093053.1 MGP_129S1SvImJ_G0035005.1 mouse_genomes_project 9 70913230 70950038 - MGP_129S1SvImJ_P0093053 Lipc protein_coding unknown_likely_coding MGP_129S1SvImJ_T0093054.1 MGP_129S1SvImJ_G0035005.1 mouse_genomes_project 9 70913230 70942376 - MGP_129S1SvImJ_P0093054 Lipc protein_coding unknown_likely_coding MGP_129S1SvImJ_T0100178.1 MGP_129S1SvImJ_G0038245.1 mouse_genomes_project 9 62610912 62611070 + Gm24526 snRNA snRNA MGP_129S1SvImJ_T0091259.1 MGP_129S1SvImJ_G0034370.1 mouse_genomes_project 9 12921699 13401397 - MGP_129S1SvImJ_P0091259 Fat3 protein_coding protein_coding MGP_129S1SvImJ_T0091298.1 MGP_129S1SvImJ_G0034397.1 mouse_genomes_project 9 16605793 16606741 - MGP_129S1SvImJ_P0091298 Olfr854 protein_coding protein_coding MGP_129S1SvImJ_T0095076.1 MGP_129S1SvImJ_G0035385.1 mouse_genomes_project 9 116786591 116802201 - MGP_129S1SvImJ_P0095076 Crtap protein_coding protein_coding MGP_129S1SvImJ_T0095299.1 MGP_129S1SvImJ_G0035454.1 mouse_genomes_project 9 124881243 124883193 - MGP_129S1SvImJ_P0095299 Cyp8b1 protein_coding protein_coding MGP_129S1SvImJ_T0093219.1 MGP_129S1SvImJ_G0035034.1 mouse_genomes_project 9 75352284 75403807 + Myo5a protein_coding retained_intron MGP_129S1SvImJ_T0093220.1 MGP_129S1SvImJ_G0035034.1 mouse_genomes_project 9 75352463 75514300 + MGP_129S1SvImJ_P0093220 Myo5a protein_coding protein_coding MGP_129S1SvImJ_T0093221.1 MGP_129S1SvImJ_G0035034.1 mouse_genomes_project 9 75352481 75418553 + Myo5a protein_coding retained_intron MGP_129S1SvImJ_T0093222.1 MGP_129S1SvImJ_G0035034.1 mouse_genomes_project 9 75352661 75509152 + MGP_129S1SvImJ_P0093222 Myo5a protein_coding protein_coding MGP_129S1SvImJ_T0093223.1 MGP_129S1SvImJ_G0035034.1 mouse_genomes_project 9 75352840 75465836 + MGP_129S1SvImJ_P0093223 Myo5a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093224.1 MGP_129S1SvImJ_G0035034.1 mouse_genomes_project 9 75352875 75509555 + MGP_129S1SvImJ_P0093224 Myo5a protein_coding protein_coding MGP_129S1SvImJ_T0093225.1 MGP_129S1SvImJ_G0035034.1 mouse_genomes_project 9 75429464 75436091 + Myo5a protein_coding retained_intron MGP_129S1SvImJ_T0093226.1 MGP_129S1SvImJ_G0035034.1 mouse_genomes_project 9 75473463 75509086 + Myo5a protein_coding processed_transcript MGP_129S1SvImJ_T0093227.1 MGP_129S1SvImJ_G0035034.1 mouse_genomes_project 9 75473526 75484816 + Myo5a protein_coding retained_intron MGP_129S1SvImJ_T0093228.1 MGP_129S1SvImJ_G0035034.1 mouse_genomes_project 9 75475175 75486916 + MGP_129S1SvImJ_P0093228 Myo5a protein_coding protein_coding MGP_129S1SvImJ_T0093229.1 MGP_129S1SvImJ_G0035034.1 mouse_genomes_project 9 75475274 75508595 + MGP_129S1SvImJ_P0093229 Myo5a protein_coding protein_coding MGP_129S1SvImJ_T0093230.1 MGP_129S1SvImJ_G0035034.1 mouse_genomes_project 9 75475276 75491949 + MGP_129S1SvImJ_P0093230 Myo5a protein_coding protein_coding MGP_129S1SvImJ_T0093231.1 MGP_129S1SvImJ_G0035034.1 mouse_genomes_project 9 75480655 75483708 + Myo5a protein_coding retained_intron MGP_129S1SvImJ_T0093232.1 MGP_129S1SvImJ_G0035034.1 mouse_genomes_project 9 75484488 75494382 + Myo5a protein_coding retained_intron MGP_129S1SvImJ_T0099016.1 MGP_129S1SvImJ_G0037089.1 mouse_genomes_project 9 25711122 25712480 + Gm15606 sense_intronic sense_intronic MGP_129S1SvImJ_T0099017.1 MGP_129S1SvImJ_G0037089.1 mouse_genomes_project 9 25711175 25712757 + Gm15606 sense_intronic sense_intronic MGP_129S1SvImJ_T0092864.1 MGP_129S1SvImJ_G0034961.1 mouse_genomes_project 9 65237708 65262916 - MGP_129S1SvImJ_P0092864 Ankdd1a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0092865.1 MGP_129S1SvImJ_G0034961.1 mouse_genomes_project 9 65241165 65258077 - MGP_129S1SvImJ_P0092865 Ankdd1a protein_coding protein_coding MGP_129S1SvImJ_T0002397.1 MGP_129S1SvImJ_G0002307.1 mouse_genomes_project 9 72603603 72606840 + TEC TEC MGP_129S1SvImJ_T0093034.1 MGP_129S1SvImJ_G0034996.1 mouse_genomes_project 9 70066459 70073045 - MGP_129S1SvImJ_P0093034 Gcnt3 protein_coding protein_coding MGP_129S1SvImJ_T0005525.1 MGP_129S1SvImJ_G0004665.1 mouse_genomes_project 9 97919731 97925356 + A930006L05Rik antisense antisense MGP_129S1SvImJ_T0091970.1 MGP_129S1SvImJ_G0034687.1 mouse_genomes_project 9 42256124 42258692 + MGP_129S1SvImJ_P0091970 Gm3898 protein_coding protein_coding MGP_129S1SvImJ_T0098670.1 MGP_129S1SvImJ_G0036755.1 mouse_genomes_project 9 103682708 103682826 + n-R5s88 rRNA rRNA MGP_129S1SvImJ_T0093190.1 MGP_129S1SvImJ_G0035027.1 mouse_genomes_project 9 73320588 73335750 + MGP_129S1SvImJ_P0093190 Gm20509 protein_coding protein_coding MGP_129S1SvImJ_T0092788.1 MGP_129S1SvImJ_G0034935.1 mouse_genomes_project 9 63772890 63818874 - MGP_129S1SvImJ_P0092788 Zwilch protein_coding protein_coding MGP_129S1SvImJ_T0092789.1 MGP_129S1SvImJ_G0034935.1 mouse_genomes_project 9 63773415 63818628 - MGP_129S1SvImJ_P0092789 Zwilch protein_coding protein_coding MGP_129S1SvImJ_T0092790.1 MGP_129S1SvImJ_G0034935.1 mouse_genomes_project 9 63773458 63786260 - Zwilch protein_coding retained_intron MGP_129S1SvImJ_T0092791.1 MGP_129S1SvImJ_G0034935.1 mouse_genomes_project 9 63777861 63818664 - MGP_129S1SvImJ_P0092791 Zwilch protein_coding protein_coding MGP_129S1SvImJ_T0092792.1 MGP_129S1SvImJ_G0034935.1 mouse_genomes_project 9 63777938 63792754 - MGP_129S1SvImJ_P0092792 Zwilch protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092793.1 MGP_129S1SvImJ_G0034935.1 mouse_genomes_project 9 63777940 63789402 - MGP_129S1SvImJ_P0092793 Zwilch protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092794.1 MGP_129S1SvImJ_G0034935.1 mouse_genomes_project 9 63786232 63799420 - Zwilch protein_coding retained_intron MGP_129S1SvImJ_T0092795.1 MGP_129S1SvImJ_G0034935.1 mouse_genomes_project 9 63789418 63799668 - Zwilch protein_coding retained_intron MGP_129S1SvImJ_T0092796.1 MGP_129S1SvImJ_G0034935.1 mouse_genomes_project 9 63799105 63818683 - MGP_129S1SvImJ_P0092796 Zwilch protein_coding protein_coding MGP_129S1SvImJ_T0092797.1 MGP_129S1SvImJ_G0034935.1 mouse_genomes_project 9 63804899 63818676 - MGP_129S1SvImJ_P0092797 Zwilch protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092798.1 MGP_129S1SvImJ_G0034935.1 mouse_genomes_project 9 63805318 63818658 - MGP_129S1SvImJ_P0092798 Zwilch protein_coding protein_coding MGP_129S1SvImJ_T0092799.1 MGP_129S1SvImJ_G0034935.1 mouse_genomes_project 9 63806606 63818660 - MGP_129S1SvImJ_P0092799 Zwilch protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092800.1 MGP_129S1SvImJ_G0034935.1 mouse_genomes_project 9 63812021 63818673 - Zwilch protein_coding retained_intron MGP_129S1SvImJ_T0002380.1 MGP_129S1SvImJ_G0002290.1 mouse_genomes_project 9 33173495 33174648 - TEC TEC MGP_129S1SvImJ_T0009270.1 MGP_129S1SvImJ_G0007449.1 mouse_genomes_project 9 68167375 68167747 + Gm28195 lincRNA lincRNA MGP_129S1SvImJ_T0009363.1 MGP_129S1SvImJ_G0007523.1 mouse_genomes_project 9 125568538 125676227 + 9530059O14Rik lincRNA lincRNA MGP_129S1SvImJ_T0009364.1 MGP_129S1SvImJ_G0007523.1 mouse_genomes_project 9 125568542 125579421 + 9530059O14Rik lincRNA lincRNA MGP_129S1SvImJ_T0009365.1 MGP_129S1SvImJ_G0007523.1 mouse_genomes_project 9 125568543 125676858 + 9530059O14Rik lincRNA lincRNA MGP_129S1SvImJ_T0002401.1 MGP_129S1SvImJ_G0002311.1 mouse_genomes_project 9 72895078 72895287 + TEC TEC MGP_129S1SvImJ_T0094798.1 MGP_129S1SvImJ_G0035339.1 mouse_genomes_project 9 111980710 111998954 + MGP_129S1SvImJ_P0094798 Cdc25a protein_coding protein_coding MGP_129S1SvImJ_T0094799.1 MGP_129S1SvImJ_G0035339.1 mouse_genomes_project 9 111981071 111986613 + MGP_129S1SvImJ_P0094799 Cdc25a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094800.1 MGP_129S1SvImJ_G0035339.1 mouse_genomes_project 9 111981437 111997707 + MGP_129S1SvImJ_P0094800 Cdc25a protein_coding protein_coding MGP_129S1SvImJ_T0094802.1 MGP_129S1SvImJ_G0035339.1 mouse_genomes_project 9 111989389 111995060 + Cdc25a protein_coding retained_intron MGP_129S1SvImJ_T0094803.1 MGP_129S1SvImJ_G0035339.1 mouse_genomes_project 9 111992775 111997427 + Cdc25a protein_coding retained_intron MGP_129S1SvImJ_T0094804.1 MGP_129S1SvImJ_G0035339.1 mouse_genomes_project 9 111993895 111994430 + Cdc25a protein_coding retained_intron MGP_129S1SvImJ_T0016076.1 MGP_129S1SvImJ_G0014165.1 mouse_genomes_project 9 73022110 73022417 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0093919.1 MGP_129S1SvImJ_G0035192.1 mouse_genomes_project 9 104584533 104618342 + Slco2a1 protein_coding processed_transcript MGP_129S1SvImJ_T0093920.1 MGP_129S1SvImJ_G0035192.1 mouse_genomes_project 9 104605611 104693193 + MGP_129S1SvImJ_P0093920 Slco2a1 protein_coding protein_coding MGP_129S1SvImJ_T0093921.1 MGP_129S1SvImJ_G0035192.1 mouse_genomes_project 9 104605763 104609518 + Slco2a1 protein_coding retained_intron MGP_129S1SvImJ_T0093922.1 MGP_129S1SvImJ_G0035192.1 mouse_genomes_project 9 104606108 104698636 + MGP_129S1SvImJ_P0093922 Slco2a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0005434.1 MGP_129S1SvImJ_G0004607.1 mouse_genomes_project 9 17754736 17764165 + Fbxl12os antisense antisense MGP_129S1SvImJ_T0005435.1 MGP_129S1SvImJ_G0004607.1 mouse_genomes_project 9 17754923 17762242 + Fbxl12os antisense antisense MGP_129S1SvImJ_T0005436.1 MGP_129S1SvImJ_G0004607.1 mouse_genomes_project 9 17755071 17762247 + Fbxl12os antisense antisense MGP_129S1SvImJ_T0005437.1 MGP_129S1SvImJ_G0004607.1 mouse_genomes_project 9 17761978 17763144 + Fbxl12os antisense antisense MGP_129S1SvImJ_T0093846.1 MGP_129S1SvImJ_G0035179.1 mouse_genomes_project 9 102042275 102194311 + MGP_129S1SvImJ_P0093846 Stag1 protein_coding protein_coding MGP_129S1SvImJ_T0093847.1 MGP_129S1SvImJ_G0035179.1 mouse_genomes_project 9 102091220 102260311 + MGP_129S1SvImJ_P0093847 Stag1 protein_coding protein_coding MGP_129S1SvImJ_T0093848.1 MGP_129S1SvImJ_G0035179.1 mouse_genomes_project 9 102091220 102423366 + MGP_129S1SvImJ_P0093848 Stag1 protein_coding protein_coding MGP_129S1SvImJ_T0093849.1 MGP_129S1SvImJ_G0035179.1 mouse_genomes_project 9 102091372 102195960 + Stag1 protein_coding retained_intron MGP_129S1SvImJ_T0093850.1 MGP_129S1SvImJ_G0035179.1 mouse_genomes_project 9 102091385 102169053 + Stag1 protein_coding retained_intron MGP_129S1SvImJ_T0093851.1 MGP_129S1SvImJ_G0035179.1 mouse_genomes_project 9 102091385 102169072 + Stag1 protein_coding retained_intron MGP_129S1SvImJ_T0093852.1 MGP_129S1SvImJ_G0035179.1 mouse_genomes_project 9 102091385 102423365 + MGP_129S1SvImJ_P0093852 Stag1 protein_coding protein_coding MGP_129S1SvImJ_T0093853.1 MGP_129S1SvImJ_G0035179.1 mouse_genomes_project 9 102091388 102329762 + MGP_129S1SvImJ_P0093853 Stag1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093854.1 MGP_129S1SvImJ_G0035179.1 mouse_genomes_project 9 102091408 102422220 + MGP_129S1SvImJ_P0093854 Stag1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093855.1 MGP_129S1SvImJ_G0035179.1 mouse_genomes_project 9 102091540 102422227 + MGP_129S1SvImJ_P0093855 Stag1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093856.1 MGP_129S1SvImJ_G0035179.1 mouse_genomes_project 9 102091542 102239617 + MGP_129S1SvImJ_P0093856 Stag1 protein_coding protein_coding MGP_129S1SvImJ_T0093857.1 MGP_129S1SvImJ_G0035179.1 mouse_genomes_project 9 102260223 102422237 + Stag1 protein_coding processed_transcript MGP_129S1SvImJ_T0093858.1 MGP_129S1SvImJ_G0035179.1 mouse_genomes_project 9 102297389 102311659 + Stag1 protein_coding retained_intron MGP_129S1SvImJ_T0093859.1 MGP_129S1SvImJ_G0035179.1 mouse_genomes_project 9 102307461 102421655 + MGP_129S1SvImJ_P0093859 Stag1 protein_coding protein_coding MGP_129S1SvImJ_T0093860.1 MGP_129S1SvImJ_G0035179.1 mouse_genomes_project 9 102310636 102318290 + Stag1 protein_coding retained_intron MGP_129S1SvImJ_T0093861.1 MGP_129S1SvImJ_G0035179.1 mouse_genomes_project 9 102351971 102416501 + MGP_129S1SvImJ_P0093861 Stag1 protein_coding protein_coding MGP_129S1SvImJ_T0093862.1 MGP_129S1SvImJ_G0035179.1 mouse_genomes_project 9 102420589 102424196 + Stag1 protein_coding retained_intron MGP_129S1SvImJ_T0092636.1 MGP_129S1SvImJ_G0034895.1 mouse_genomes_project 9 58128588 58167358 + MGP_129S1SvImJ_P0092636 Hcn4 protein_coding protein_coding MGP_129S1SvImJ_T0091602.1 MGP_129S1SvImJ_G0034517.1 mouse_genomes_project 9 28807570 28873259 - MGP_129S1SvImJ_P0091602 Aplp2 protein_coding protein_coding MGP_129S1SvImJ_T0091603.1 MGP_129S1SvImJ_G0034517.1 mouse_genomes_project 9 28807570 28873259 - MGP_129S1SvImJ_P0091603 Aplp2 protein_coding protein_coding MGP_129S1SvImJ_T0016139.1 MGP_129S1SvImJ_G0014228.1 mouse_genomes_project 9 98288826 98289127 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0095101.1 MGP_129S1SvImJ_G0035400.1 mouse_genomes_project 9 118657610 118751207 - MGP_129S1SvImJ_P0095101 Tgfbr2 protein_coding protein_coding MGP_129S1SvImJ_T0095102.1 MGP_129S1SvImJ_G0035400.1 mouse_genomes_project 9 118657610 118751207 - MGP_129S1SvImJ_P0095102 Tgfbr2 protein_coding protein_coding MGP_129S1SvImJ_T0092617.1 MGP_129S1SvImJ_G0034892.1 mouse_genomes_project 9 57821104 57837956 - MGP_129S1SvImJ_P0092617 Cd276 protein_coding protein_coding MGP_129S1SvImJ_T0092618.1 MGP_129S1SvImJ_G0034892.1 mouse_genomes_project 9 57821106 57852142 - MGP_129S1SvImJ_P0092618 Cd276 protein_coding protein_coding MGP_129S1SvImJ_T0092295.1 MGP_129S1SvImJ_G0034789.1 mouse_genomes_project 9 49652483 49656378 + MGP_129S1SvImJ_P0092295 Cryab protein_coding protein_coding MGP_129S1SvImJ_T0091194.1 MGP_129S1SvImJ_G0034349.1 mouse_genomes_project 9 11394176 11441194 - MGP_129S1SvImJ_P0091194 Kdm4d protein_coding protein_coding MGP_129S1SvImJ_T0091195.1 MGP_129S1SvImJ_G0034349.1 mouse_genomes_project 9 11394844 11441112 - MGP_129S1SvImJ_P0091195 Kdm4d protein_coding protein_coding MGP_129S1SvImJ_T0092866.1 MGP_129S1SvImJ_G0034962.1 mouse_genomes_project 9 65302406 65330845 - MGP_129S1SvImJ_P0092866 Plekho2 protein_coding protein_coding MGP_129S1SvImJ_T0095019.1 MGP_129S1SvImJ_G0035375.1 mouse_genomes_project 9 113806896 113949696 - MGP_129S1SvImJ_P0095019 Stac protein_coding protein_coding MGP_129S1SvImJ_T0095020.1 MGP_129S1SvImJ_G0035375.1 mouse_genomes_project 9 113806896 113949573 - MGP_129S1SvImJ_P0095020 Stac protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095021.1 MGP_129S1SvImJ_G0035375.1 mouse_genomes_project 9 113890077 113949677 - Stac protein_coding processed_transcript MGP_129S1SvImJ_T0100218.1 MGP_129S1SvImJ_G0038285.1 mouse_genomes_project 9 117040645 117040750 - Gm23232 snRNA snRNA MGP_129S1SvImJ_T0095269.1 MGP_129S1SvImJ_G0035446.1 mouse_genomes_project 9 124661431 124663964 + MGP_129S1SvImJ_P0095269 Deb1 protein_coding protein_coding MGP_129S1SvImJ_T0092246.1 MGP_129S1SvImJ_G0034774.1 mouse_genomes_project 9 48332764 48640683 - MGP_129S1SvImJ_P0092246 Ncam1 protein_coding protein_coding MGP_129S1SvImJ_T0092247.1 MGP_129S1SvImJ_G0034774.1 mouse_genomes_project 9 48332776 48402309 - MGP_129S1SvImJ_P0092247 Ncam1 protein_coding protein_coding MGP_129S1SvImJ_T0092248.1 MGP_129S1SvImJ_G0034774.1 mouse_genomes_project 9 48335720 48640630 - MGP_129S1SvImJ_P0092248 Ncam1 protein_coding protein_coding MGP_129S1SvImJ_T0092249.1 MGP_129S1SvImJ_G0034774.1 mouse_genomes_project 9 48347937 48640648 - MGP_129S1SvImJ_P0092249 Ncam1 protein_coding protein_coding MGP_129S1SvImJ_T0092251.1 MGP_129S1SvImJ_G0034774.1 mouse_genomes_project 9 48354356 48375358 - MGP_129S1SvImJ_P0092251 Ncam1 protein_coding protein_coding MGP_129S1SvImJ_T0092252.1 MGP_129S1SvImJ_G0034774.1 mouse_genomes_project 9 48362005 48640516 - MGP_129S1SvImJ_P0092252 Ncam1 protein_coding protein_coding MGP_129S1SvImJ_T0091273.1 MGP_129S1SvImJ_G0034375.1 mouse_genomes_project 9 15472712 15475569 + MGP_129S1SvImJ_P0091273 Mbd3l2 protein_coding protein_coding MGP_129S1SvImJ_T0095256.1 MGP_129S1SvImJ_G0035442.1 mouse_genomes_project 9 124428446 124434715 - MGP_129S1SvImJ_P0095256 Cck protein_coding protein_coding MGP_129S1SvImJ_T0094882.1 MGP_129S1SvImJ_G0035348.1 mouse_genomes_project 9 112572694 112633578 - MGP_129S1SvImJ_P0094882 Klhl18 protein_coding protein_coding MGP_129S1SvImJ_T0094883.1 MGP_129S1SvImJ_G0035348.1 mouse_genomes_project 9 112572702 112633574 - MGP_129S1SvImJ_P0094883 Klhl18 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094884.1 MGP_129S1SvImJ_G0035348.1 mouse_genomes_project 9 112572702 112633673 - MGP_129S1SvImJ_P0094884 Klhl18 protein_coding protein_coding MGP_129S1SvImJ_T0094885.1 MGP_129S1SvImJ_G0035348.1 mouse_genomes_project 9 112579316 112581179 - Klhl18 protein_coding retained_intron MGP_129S1SvImJ_T0094886.1 MGP_129S1SvImJ_G0035348.1 mouse_genomes_project 9 112584789 112604695 - MGP_129S1SvImJ_P0094886 Klhl18 protein_coding protein_coding MGP_129S1SvImJ_T0094887.1 MGP_129S1SvImJ_G0035348.1 mouse_genomes_project 9 112586008 112595981 - Klhl18 protein_coding retained_intron MGP_129S1SvImJ_T0095199.1 MGP_129S1SvImJ_G0035424.1 mouse_genomes_project 9 122702570 122734212 + MGP_129S1SvImJ_P0095199 Wdr48 protein_coding protein_coding MGP_129S1SvImJ_T0092650.1 MGP_129S1SvImJ_G0034901.1 mouse_genomes_project 9 58893741 58919055 + MGP_129S1SvImJ_P0092650 Hexa protein_coding protein_coding MGP_129S1SvImJ_T0092658.1 MGP_129S1SvImJ_G0034904.1 mouse_genomes_project 9 59017055 59041467 + MGP_129S1SvImJ_P0092658 Pkm protein_coding unknown_likely_coding MGP_129S1SvImJ_T0002487.1 MGP_129S1SvImJ_G0002396.1 mouse_genomes_project 9 112167273 112168904 + TEC TEC MGP_129S1SvImJ_T0011771.1 MGP_129S1SvImJ_G0009887.1 mouse_genomes_project 9 124164838 124165084 + Gm22987 misc_RNA misc_RNA MGP_129S1SvImJ_T0009282.1 MGP_129S1SvImJ_G0007460.1 mouse_genomes_project 9 75719461 75728343 + 4933433G15Rik lincRNA lincRNA MGP_129S1SvImJ_T0009283.1 MGP_129S1SvImJ_G0007460.1 mouse_genomes_project 9 75719461 75726171 + 4933433G15Rik lincRNA lincRNA MGP_129S1SvImJ_T0002427.1 MGP_129S1SvImJ_G0002336.1 mouse_genomes_project 9 88597728 88599557 - TEC TEC MGP_129S1SvImJ_T0095062.1 MGP_129S1SvImJ_G0035380.1 mouse_genomes_project 9 116185112 116297547 + MGP_129S1SvImJ_P0095062 Clasp2 protein_coding protein_coding MGP_129S1SvImJ_T0095063.1 MGP_129S1SvImJ_G0035380.1 mouse_genomes_project 9 116185112 116297547 + MGP_129S1SvImJ_P0095063 Clasp2 protein_coding protein_coding MGP_129S1SvImJ_T0095064.1 MGP_129S1SvImJ_G0035380.1 mouse_genomes_project 9 116185126 116296002 + MGP_129S1SvImJ_P0095064 Clasp2 protein_coding protein_coding MGP_129S1SvImJ_T0091555.1 MGP_129S1SvImJ_G0034501.1 mouse_genomes_project 9 24258292 24299709 - MGP_129S1SvImJ_P0091555 Glb1l3 protein_coding protein_coding MGP_129S1SvImJ_T0005480.1 MGP_129S1SvImJ_G0004636.1 mouse_genomes_project 9 59341328 59348976 + Gm7616 antisense antisense MGP_129S1SvImJ_T0093041.1 MGP_129S1SvImJ_G0035000.1 mouse_genomes_project 9 70496935 70585898 - MGP_129S1SvImJ_P0093041 Rnf111 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0093042.1 MGP_129S1SvImJ_G0035000.1 mouse_genomes_project 9 70496942 70585851 - MGP_129S1SvImJ_P0093042 Rnf111 protein_coding protein_coding MGP_129S1SvImJ_T0093043.1 MGP_129S1SvImJ_G0035000.1 mouse_genomes_project 9 70496943 70585480 - MGP_129S1SvImJ_P0093043 Rnf111 protein_coding protein_coding MGP_129S1SvImJ_T0091509.1 MGP_129S1SvImJ_G0034489.1 mouse_genomes_project 9 19795718 20215476 + MGP_129S1SvImJ_P0091509 Bbs9 protein_coding protein_coding MGP_129S1SvImJ_T0091510.1 MGP_129S1SvImJ_G0034489.1 mouse_genomes_project 9 19795725 20215470 + MGP_129S1SvImJ_P0091510 Bbs9 protein_coding protein_coding MGP_129S1SvImJ_T0091511.1 MGP_129S1SvImJ_G0034489.1 mouse_genomes_project 9 19795734 19834936 + MGP_129S1SvImJ_P0091511 Bbs9 protein_coding protein_coding MGP_129S1SvImJ_T0091512.1 MGP_129S1SvImJ_G0034489.1 mouse_genomes_project 9 19795734 20215470 + MGP_129S1SvImJ_P0091512 Bbs9 protein_coding protein_coding MGP_129S1SvImJ_T0091513.1 MGP_129S1SvImJ_G0034489.1 mouse_genomes_project 9 19795870 19834982 + MGP_129S1SvImJ_P0091513 Bbs9 protein_coding protein_coding MGP_129S1SvImJ_T0091514.1 MGP_129S1SvImJ_G0034489.1 mouse_genomes_project 9 19810804 20215476 + MGP_129S1SvImJ_P0091514 Bbs9 protein_coding protein_coding MGP_129S1SvImJ_T0091515.1 MGP_129S1SvImJ_G0034489.1 mouse_genomes_project 9 19833345 19903373 + Bbs9 protein_coding processed_transcript MGP_129S1SvImJ_T0091516.1 MGP_129S1SvImJ_G0034489.1 mouse_genomes_project 9 19898279 19951909 + Bbs9 protein_coding processed_transcript MGP_129S1SvImJ_T0091517.1 MGP_129S1SvImJ_G0034489.1 mouse_genomes_project 9 19958538 20215476 + MGP_129S1SvImJ_P0091517 Bbs9 protein_coding protein_coding MGP_129S1SvImJ_T0091518.1 MGP_129S1SvImJ_G0034489.1 mouse_genomes_project 9 19966494 20215476 + MGP_129S1SvImJ_P0091518 Bbs9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091519.1 MGP_129S1SvImJ_G0034489.1 mouse_genomes_project 9 19981811 20005626 + Bbs9 protein_coding retained_intron MGP_129S1SvImJ_T0091520.1 MGP_129S1SvImJ_G0034489.1 mouse_genomes_project 9 20003862 20215470 + Bbs9 protein_coding retained_intron MGP_129S1SvImJ_T0094299.1 MGP_129S1SvImJ_G0035264.1 mouse_genomes_project 9 109484877 109492723 - MGP_129S1SvImJ_P0094299 Sema3b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094300.1 MGP_129S1SvImJ_G0035264.1 mouse_genomes_project 9 109485420 109496432 - MGP_129S1SvImJ_P0094300 Sema3b protein_coding protein_coding MGP_129S1SvImJ_T0094301.1 MGP_129S1SvImJ_G0035264.1 mouse_genomes_project 9 109485556 109496402 - MGP_129S1SvImJ_P0094301 Sema3b protein_coding protein_coding MGP_129S1SvImJ_T0094302.1 MGP_129S1SvImJ_G0035264.1 mouse_genomes_project 9 109485557 109493860 - MGP_129S1SvImJ_P0094302 Sema3b protein_coding protein_coding MGP_129S1SvImJ_T0094303.1 MGP_129S1SvImJ_G0035264.1 mouse_genomes_project 9 109485558 109496396 - MGP_129S1SvImJ_P0094303 Sema3b protein_coding protein_coding MGP_129S1SvImJ_T0094304.1 MGP_129S1SvImJ_G0035264.1 mouse_genomes_project 9 109485558 109492604 - MGP_129S1SvImJ_P0094304 Sema3b protein_coding protein_coding MGP_129S1SvImJ_T0094305.1 MGP_129S1SvImJ_G0035264.1 mouse_genomes_project 9 109487011 109488515 - Sema3b protein_coding retained_intron MGP_129S1SvImJ_T0094306.1 MGP_129S1SvImJ_G0035264.1 mouse_genomes_project 9 109488823 109489375 - Sema3b protein_coding retained_intron MGP_129S1SvImJ_T0094307.1 MGP_129S1SvImJ_G0035264.1 mouse_genomes_project 9 109490360 109492471 - MGP_129S1SvImJ_P0094307 Sema3b protein_coding protein_coding MGP_129S1SvImJ_T0094308.1 MGP_129S1SvImJ_G0035264.1 mouse_genomes_project 9 109490515 109494120 - MGP_129S1SvImJ_P0094308 Sema3b protein_coding protein_coding MGP_129S1SvImJ_T0094309.1 MGP_129S1SvImJ_G0035264.1 mouse_genomes_project 9 109490547 109493887 - MGP_129S1SvImJ_P0094309 Sema3b protein_coding protein_coding MGP_129S1SvImJ_T0094310.1 MGP_129S1SvImJ_G0035264.1 mouse_genomes_project 9 109491367 109493885 - MGP_129S1SvImJ_P0094310 Sema3b protein_coding protein_coding MGP_129S1SvImJ_T0094311.1 MGP_129S1SvImJ_G0035264.1 mouse_genomes_project 9 109492248 109496423 - MGP_129S1SvImJ_P0094311 Sema3b protein_coding protein_coding MGP_129S1SvImJ_T0094312.1 MGP_129S1SvImJ_G0035264.1 mouse_genomes_project 9 109492292 109494389 - Sema3b protein_coding processed_transcript MGP_129S1SvImJ_T0095245.1 MGP_129S1SvImJ_G0035440.1 mouse_genomes_project 9 123868096 124014114 - Ulk4 protein_coding processed_transcript MGP_129S1SvImJ_T0095246.1 MGP_129S1SvImJ_G0035440.1 mouse_genomes_project 9 123872282 123948199 - Ulk4 protein_coding retained_intron MGP_129S1SvImJ_T0095247.1 MGP_129S1SvImJ_G0035440.1 mouse_genomes_project 9 123872282 124212865 - MGP_129S1SvImJ_P0095247 Ulk4 protein_coding protein_coding MGP_129S1SvImJ_T0095248.1 MGP_129S1SvImJ_G0035440.1 mouse_genomes_project 9 123874232 124212838 - MGP_129S1SvImJ_P0095248 Ulk4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095249.1 MGP_129S1SvImJ_G0035440.1 mouse_genomes_project 9 123978710 124212849 - MGP_129S1SvImJ_P0095249 Ulk4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095250.1 MGP_129S1SvImJ_G0035440.1 mouse_genomes_project 9 123978714 124212840 - MGP_129S1SvImJ_P0095250 Ulk4 protein_coding protein_coding MGP_129S1SvImJ_T0095251.1 MGP_129S1SvImJ_G0035440.1 mouse_genomes_project 9 124008581 124212865 - Ulk4 protein_coding retained_intron MGP_129S1SvImJ_T0095252.1 MGP_129S1SvImJ_G0035440.1 mouse_genomes_project 9 124064112 124184016 - MGP_129S1SvImJ_P0095252 Ulk4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0095253.1 MGP_129S1SvImJ_G0035440.1 mouse_genomes_project 9 124067606 124109599 - Ulk4 protein_coding processed_transcript MGP_129S1SvImJ_T0016044.1 MGP_129S1SvImJ_G0014133.1 mouse_genomes_project 9 34399907 34400106 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100186.1 MGP_129S1SvImJ_G0038253.1 mouse_genomes_project 9 66986167 66986315 + Gm22145 snRNA snRNA MGP_129S1SvImJ_T0101438.1 MGP_129S1SvImJ_G0039505.1 mouse_genomes_project 9 18058257 18058342 + Gm24067 snoRNA snoRNA MGP_129S1SvImJ_T0091299.1 MGP_129S1SvImJ_G0034398.1 mouse_genomes_project 9 16625863 16626855 + MGP_129S1SvImJ_P0091299 Olfr855 protein_coding protein_coding MGP_129S1SvImJ_T0101437.1 MGP_129S1SvImJ_G0039504.1 mouse_genomes_project 9 16471967 16472096 + Gm23048 snoRNA snoRNA MGP_129S1SvImJ_T0016041.1 MGP_129S1SvImJ_G0014130.1 mouse_genomes_project 9 33089529 33089847 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009281.1 MGP_129S1SvImJ_G0007459.1 mouse_genomes_project 9 75116204 75118679 - Gm28182 lincRNA lincRNA MGP_129S1SvImJ_T0101455.1 MGP_129S1SvImJ_G0039522.1 mouse_genomes_project 9 45226330 45226460 + Gm22659 snoRNA snoRNA MGP_129S1SvImJ_T0011098.1 MGP_129S1SvImJ_G0009214.1 mouse_genomes_project 9 67119114 67119181 - Mir190a miRNA miRNA MGP_129S1SvImJ_T0091211.1 MGP_129S1SvImJ_G0034355.1 mouse_genomes_project 9 11733893 11736649 - MGP_129S1SvImJ_P0091211 Ankrd49 protein_coding protein_coding MGP_129S1SvImJ_T0101466.1 MGP_129S1SvImJ_G0039533.1 mouse_genomes_project 9 68214838 68214968 + Gm22382 snoRNA snoRNA MGP_129S1SvImJ_T0092110.1 MGP_129S1SvImJ_G0034727.1 mouse_genomes_project 9 43582123 43594251 + MGP_129S1SvImJ_P0092110 Mpzl2 protein_coding protein_coding MGP_129S1SvImJ_T0016173.1 MGP_129S1SvImJ_G0014262.1 mouse_genomes_project 9 123157743 123158333 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0093754.1 MGP_129S1SvImJ_G0035151.1 mouse_genomes_project 9 98716194 99321297 - MGP_129S1SvImJ_P0093754 Clstn2 protein_coding protein_coding MGP_129S1SvImJ_T0093755.1 MGP_129S1SvImJ_G0035151.1 mouse_genomes_project 9 98725058 99321099 - MGP_129S1SvImJ_P0093755 Clstn2 protein_coding protein_coding MGP_129S1SvImJ_T0092257.1 MGP_129S1SvImJ_G0034779.1 mouse_genomes_project 9 49450819 49454776 - MGP_129S1SvImJ_P0092257 Tex12 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091853.1 MGP_129S1SvImJ_G0034620.1 mouse_genomes_project 9 37059485 37060418 - MGP_129S1SvImJ_P0091853 Olfr934 protein_coding protein_coding MGP_129S1SvImJ_T0093446.1 MGP_129S1SvImJ_G0035089.1 mouse_genomes_project 9 84527664 84564086 + Ttk protein_coding retained_intron MGP_129S1SvImJ_T0093447.1 MGP_129S1SvImJ_G0035089.1 mouse_genomes_project 9 84527665 84566982 + MGP_129S1SvImJ_P0093447 Ttk protein_coding protein_coding MGP_129S1SvImJ_T0093448.1 MGP_129S1SvImJ_G0035089.1 mouse_genomes_project 9 84527692 84566979 + MGP_129S1SvImJ_P0093448 Ttk protein_coding protein_coding MGP_129S1SvImJ_T0093449.1 MGP_129S1SvImJ_G0035089.1 mouse_genomes_project 9 84527708 84530473 + Ttk protein_coding retained_intron MGP_129S1SvImJ_T0093450.1 MGP_129S1SvImJ_G0035089.1 mouse_genomes_project 9 84527715 84537320 + Ttk protein_coding processed_transcript MGP_129S1SvImJ_T0093451.1 MGP_129S1SvImJ_G0035089.1 mouse_genomes_project 9 84527740 84535985 + MGP_129S1SvImJ_P0093451 Ttk protein_coding protein_coding MGP_129S1SvImJ_T0093452.1 MGP_129S1SvImJ_G0035089.1 mouse_genomes_project 9 84528756 84566661 + MGP_129S1SvImJ_P0093452 Ttk protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091620.1 MGP_129S1SvImJ_G0034522.1 mouse_genomes_project 9 29846675 30009691 + MGP_129S1SvImJ_P0091620 Arhgap32 protein_coding protein_coding MGP_129S1SvImJ_T0091621.1 MGP_129S1SvImJ_G0034522.1 mouse_genomes_project 9 29846675 30001784 + MGP_129S1SvImJ_P0091621 Arhgap32 protein_coding protein_coding MGP_129S1SvImJ_T0091622.1 MGP_129S1SvImJ_G0034522.1 mouse_genomes_project 9 29860114 29916062 + MGP_129S1SvImJ_P0091622 Arhgap32 protein_coding protein_coding MGP_129S1SvImJ_T0091623.1 MGP_129S1SvImJ_G0034522.1 mouse_genomes_project 9 29916006 29944373 + Arhgap32 protein_coding retained_intron MGP_129S1SvImJ_T0091624.1 MGP_129S1SvImJ_G0034522.1 mouse_genomes_project 9 29943457 30001854 + MGP_129S1SvImJ_P0091624 Arhgap32 protein_coding protein_coding MGP_129S1SvImJ_T0091625.1 MGP_129S1SvImJ_G0034522.1 mouse_genomes_project 9 29963332 29985349 + MGP_129S1SvImJ_P0091625 Arhgap32 protein_coding protein_coding MGP_129S1SvImJ_T0091626.1 MGP_129S1SvImJ_G0034522.1 mouse_genomes_project 9 29984529 29988830 + Arhgap32 protein_coding retained_intron MGP_129S1SvImJ_T0018565.1 MGP_129S1SvImJ_G0015739.1 mouse_genomes_project 9 59347442 59352762 - Gm15507 processed_transcript processed_transcript MGP_129S1SvImJ_T0018566.1 MGP_129S1SvImJ_G0015739.1 mouse_genomes_project 9 59347644 59352762 - Gm15507 processed_transcript processed_transcript MGP_129S1SvImJ_T0018567.1 MGP_129S1SvImJ_G0015739.1 mouse_genomes_project 9 59350527 59352792 - Gm15507 processed_transcript processed_transcript MGP_129S1SvImJ_T0016116.1 MGP_129S1SvImJ_G0014205.1 mouse_genomes_project 9 91169308 91169592 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011116.1 MGP_129S1SvImJ_G0009232.1 mouse_genomes_project 9 109086706 109086794 - Gm22238 miRNA miRNA MGP_129S1SvImJ_T0091084.1 MGP_129S1SvImJ_G0034314.1 mouse_genomes_project 9 2118807 2146204 + MGP_129S1SvImJ_P0091084 Casp12 protein_coding protein_coding MGP_129S1SvImJ_T0091085.1 MGP_129S1SvImJ_G0034314.1 mouse_genomes_project 9 2118853 2146052 + MGP_129S1SvImJ_P0091085 Casp12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0091086.1 MGP_129S1SvImJ_G0034314.1 mouse_genomes_project 9 2118856 2126673 + Casp12 protein_coding retained_intron MGP_129S1SvImJ_T0091087.1 MGP_129S1SvImJ_G0034314.1 mouse_genomes_project 9 2118873 2127676 + Casp12 protein_coding retained_intron MGP_129S1SvImJ_T0091088.1 MGP_129S1SvImJ_G0034314.1 mouse_genomes_project 9 2118881 2131636 + MGP_129S1SvImJ_P0091088 Casp12 protein_coding protein_coding MGP_129S1SvImJ_T0093643.1 MGP_129S1SvImJ_G0035133.1 mouse_genomes_project 9 96510296 96517797 - MGP_129S1SvImJ_P0093643 Chst2 protein_coding protein_coding MGP_129S1SvImJ_T0093326.1 MGP_129S1SvImJ_G0035064.1 mouse_genomes_project 9 78796090 78797533 + MGP_129S1SvImJ_P0093326 protein_coding protein_coding MGP_129S1SvImJ_T0101501.1 MGP_129S1SvImJ_G0039568.1 mouse_genomes_project 9 122954904 122955060 + Gm24044 snoRNA snoRNA MGP_129S1SvImJ_T0101448.1 MGP_129S1SvImJ_G0039515.1 mouse_genomes_project 9 37668078 37668205 - Gm24278 snoRNA snoRNA MGP_129S1SvImJ_T0005500.1 MGP_129S1SvImJ_G0004651.1 mouse_genomes_project 9 79150306 79151063 - 4921509A06Rik antisense antisense MGP_129S1SvImJ_T0092340.1 MGP_129S1SvImJ_G0034798.1 mouse_genomes_project 9 50133353 50164712 + MGP_129S1SvImJ_P0092340 Pou2af1 protein_coding protein_coding MGP_129S1SvImJ_T0005562.1 MGP_129S1SvImJ_G0004693.1 mouse_genomes_project 9 109914403 109918718 - 4930535L15Rik antisense antisense MGP_129S1SvImJ_T0100198.1 MGP_129S1SvImJ_G0038265.1 mouse_genomes_project 9 83113213 83113310 - Gm24393 snRNA snRNA MGP_129S1SvImJ_T0091418.1 MGP_129S1SvImJ_G0034451.1 mouse_genomes_project 9 18577797 18613693 + MGP_129S1SvImJ_P0091418 Ilf3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0091419.1 MGP_129S1SvImJ_G0034451.1 mouse_genomes_project 9 18577881 18614995 + MGP_129S1SvImJ_P0091419 Ilf3 protein_coding protein_coding MGP_129S1SvImJ_T0091420.1 MGP_129S1SvImJ_G0034451.1 mouse_genomes_project 9 18577881 18618553 + MGP_129S1SvImJ_P0091420 Ilf3 protein_coding protein_coding MGP_129S1SvImJ_T0091421.1 MGP_129S1SvImJ_G0034451.1 mouse_genomes_project 9 18616069 18618562 + MGP_129S1SvImJ_P0091421 Ilf3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0093756.1 MGP_129S1SvImJ_G0035152.1 mouse_genomes_project 9 99584735 99699743 + MGP_129S1SvImJ_P0093756 Nmnat3 protein_coding protein_coding MGP_129S1SvImJ_T0093757.1 MGP_129S1SvImJ_G0035152.1 mouse_genomes_project 9 99584755 99663551 + Nmnat3 protein_coding processed_transcript MGP_129S1SvImJ_T0093758.1 MGP_129S1SvImJ_G0035152.1 mouse_genomes_project 9 99593911 99651147 + Nmnat3 protein_coding retained_intron MGP_129S1SvImJ_T0093759.1 MGP_129S1SvImJ_G0035152.1 mouse_genomes_project 9 99593911 99721900 + MGP_129S1SvImJ_P0093759 Nmnat3 protein_coding protein_coding MGP_129S1SvImJ_T0093761.1 MGP_129S1SvImJ_G0035152.1 mouse_genomes_project 9 99649445 99711669 + MGP_129S1SvImJ_P0093761 Nmnat3 protein_coding protein_coding MGP_129S1SvImJ_T0093938.1 MGP_129S1SvImJ_G0035197.1 mouse_genomes_project 9 104866737 104904909 - MGP_129S1SvImJ_P0093938 1300017J02Rik protein_coding protein_coding MGP_129S1SvImJ_T0093939.1 MGP_129S1SvImJ_G0035197.1 mouse_genomes_project 9 104866738 104873014 - 1300017J02Rik protein_coding retained_intron MGP_129S1SvImJ_T0093940.1 MGP_129S1SvImJ_G0035197.1 mouse_genomes_project 9 104866840 104904836 - MGP_129S1SvImJ_P0093940 1300017J02Rik protein_coding protein_coding MGP_129S1SvImJ_T0093941.1 MGP_129S1SvImJ_G0035197.1 mouse_genomes_project 9 104868053 104882475 - MGP_129S1SvImJ_P0093941 1300017J02Rik protein_coding protein_coding MGP_129S1SvImJ_T0093942.1 MGP_129S1SvImJ_G0035197.1 mouse_genomes_project 9 104887042 104904909 - 1300017J02Rik protein_coding processed_transcript MGP_129S1SvImJ_T0093943.1 MGP_129S1SvImJ_G0035197.1 mouse_genomes_project 9 104899342 104917540 - MGP_129S1SvImJ_P0093943 1300017J02Rik protein_coding protein_coding MGP_129S1SvImJ_T0091811.1 MGP_129S1SvImJ_G0034584.1 mouse_genomes_project 9 36158488 36159433 + MGP_129S1SvImJ_P0091811 Olfr888 protein_coding protein_coding MGP_129S1SvImJ_T0091894.1 MGP_129S1SvImJ_G0034655.1 mouse_genomes_project 9 38161535 38162471 + MGP_129S1SvImJ_P0091894 Olfr978 protein_coding protein_coding MGP_129S1SvImJ_T0092364.1 MGP_129S1SvImJ_G0034810.1 mouse_genomes_project 9 52425294 52453435 + MGP_129S1SvImJ_P0092364 4930550C14Rik protein_coding protein_coding MGP_129S1SvImJ_T0016117.1 MGP_129S1SvImJ_G0014206.1 mouse_genomes_project 9 91169317 91169641 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002484.1 MGP_129S1SvImJ_G0002393.1 mouse_genomes_project 9 110816350 110816692 + TEC TEC MGP_129S1SvImJ_T0091911.1 MGP_129S1SvImJ_G0034667.1 mouse_genomes_project 9 38499358 38554976 - MGP_129S1SvImJ_P0091911 Gramd1b protein_coding protein_coding MGP_129S1SvImJ_T0091912.1 MGP_129S1SvImJ_G0034667.1 mouse_genomes_project 9 38499364 38745118 - MGP_129S1SvImJ_P0091912 Gramd1b protein_coding protein_coding MGP_129S1SvImJ_T0091913.1 MGP_129S1SvImJ_G0034667.1 mouse_genomes_project 9 38499370 38668708 - MGP_129S1SvImJ_P0091913 Gramd1b protein_coding protein_coding MGP_129S1SvImJ_T0091914.1 MGP_129S1SvImJ_G0034667.1 mouse_genomes_project 9 38504000 38603447 - MGP_129S1SvImJ_P0091914 Gramd1b protein_coding protein_coding MGP_129S1SvImJ_T0091915.1 MGP_129S1SvImJ_G0034667.1 mouse_genomes_project 9 38504031 38668802 - MGP_129S1SvImJ_P0091915 Gramd1b protein_coding protein_coding MGP_129S1SvImJ_T0091916.1 MGP_129S1SvImJ_G0034667.1 mouse_genomes_project 9 38504114 38554598 - MGP_129S1SvImJ_P0091916 Gramd1b protein_coding protein_coding MGP_129S1SvImJ_T0091917.1 MGP_129S1SvImJ_G0034667.1 mouse_genomes_project 9 38506150 38513116 - Gramd1b protein_coding retained_intron MGP_129S1SvImJ_T0091918.1 MGP_129S1SvImJ_G0034667.1 mouse_genomes_project 9 38523958 38540729 - Gramd1b protein_coding retained_intron MGP_129S1SvImJ_T0091919.1 MGP_129S1SvImJ_G0034667.1 mouse_genomes_project 9 38524722 38603745 - Gramd1b protein_coding processed_transcript MGP_129S1SvImJ_T0091920.1 MGP_129S1SvImJ_G0034667.1 mouse_genomes_project 9 38524724 38603731 - Gramd1b protein_coding processed_transcript MGP_129S1SvImJ_T0091921.1 MGP_129S1SvImJ_G0034667.1 mouse_genomes_project 9 38540686 38680373 - Gramd1b protein_coding processed_transcript MGP_129S1SvImJ_T0091922.1 MGP_129S1SvImJ_G0034667.1 mouse_genomes_project 9 38540699 38680363 - Gramd1b protein_coding processed_transcript MGP_129S1SvImJ_T0091923.1 MGP_129S1SvImJ_G0034667.1 mouse_genomes_project 9 38540746 38587734 - Gramd1b protein_coding processed_transcript MGP_129S1SvImJ_T0091406.1 MGP_129S1SvImJ_G0034447.1 mouse_genomes_project 9 18469184 18488102 - MGP_129S1SvImJ_P0091406 Kri1 protein_coding protein_coding MGP_129S1SvImJ_T0091407.1 MGP_129S1SvImJ_G0034447.1 mouse_genomes_project 9 18469363 18488086 - MGP_129S1SvImJ_P0091407 Kri1 protein_coding protein_coding MGP_129S1SvImJ_T0091408.1 MGP_129S1SvImJ_G0034447.1 mouse_genomes_project 9 18469595 18471121 - Kri1 protein_coding retained_intron MGP_129S1SvImJ_T0091409.1 MGP_129S1SvImJ_G0034447.1 mouse_genomes_project 9 18476286 18488102 - Kri1 protein_coding retained_intron MGP_129S1SvImJ_T0091410.1 MGP_129S1SvImJ_G0034447.1 mouse_genomes_project 9 18478368 18488089 - Kri1 protein_coding retained_intron MGP_129S1SvImJ_T0091411.1 MGP_129S1SvImJ_G0034447.1 mouse_genomes_project 9 18479328 18488102 - Kri1 protein_coding retained_intron MGP_129S1SvImJ_T0091412.1 MGP_129S1SvImJ_G0034447.1 mouse_genomes_project 9 18487657 18488089 - Kri1 protein_coding retained_intron MGP_129S1SvImJ_T0091121.1 MGP_129S1SvImJ_G0034329.1 mouse_genomes_project 9 4673687 4693292 - MGP_129S1SvImJ_P0091121 Birc2 protein_coding protein_coding MGP_129S1SvImJ_T0091122.1 MGP_129S1SvImJ_G0034329.1 mouse_genomes_project 9 4673696 4691477 - MGP_129S1SvImJ_P0091122 Birc2 protein_coding protein_coding MGP_129S1SvImJ_T0091123.1 MGP_129S1SvImJ_G0034329.1 mouse_genomes_project 9 4691005 4693040 - Birc2 protein_coding processed_transcript MGP_129S1SvImJ_T0091124.1 MGP_129S1SvImJ_G0034329.1 mouse_genomes_project 9 4691969 4693298 - Birc2 protein_coding retained_intron MGP_129S1SvImJ_T0091125.1 MGP_129S1SvImJ_G0034329.1 mouse_genomes_project 9 4692921 4693299 - MGP_129S1SvImJ_P0091125 Birc2 protein_coding protein_coding MGP_129S1SvImJ_T0092855.1 MGP_129S1SvImJ_G0034956.1 mouse_genomes_project 9 65118906 65121875 - MGP_129S1SvImJ_P0092855 Kbtbd13 protein_coding protein_coding MGP_129S1SvImJ_T0011075.1 MGP_129S1SvImJ_G0009191.1 mouse_genomes_project 9 37125562 37125636 - Gm25529 miRNA miRNA MGP_129S1SvImJ_T0091949.1 MGP_129S1SvImJ_G0034677.1 mouse_genomes_project 9 40671979 40686345 - Tecta protein_coding processed_transcript MGP_129S1SvImJ_T0091950.1 MGP_129S1SvImJ_G0034677.1 mouse_genomes_project 9 40671982 40745841 - MGP_129S1SvImJ_P0091950 Tecta protein_coding protein_coding MGP_129S1SvImJ_T0091951.1 MGP_129S1SvImJ_G0034677.1 mouse_genomes_project 9 40672055 40745639 - MGP_129S1SvImJ_P0091951 Tecta protein_coding protein_coding MGP_129S1SvImJ_T0091362.1 MGP_129S1SvImJ_G0034424.1 mouse_genomes_project 9 17796401 17812954 + MGP_129S1SvImJ_P0091362 Pin1 protein_coding protein_coding MGP_129S1SvImJ_T0094494.1 MGP_129S1SvImJ_G0035287.1 mouse_genomes_project 9 110025087 110127452 - MGP_129S1SvImJ_P0094494 Bsn protein_coding protein_coding MGP_129S1SvImJ_T0094495.1 MGP_129S1SvImJ_G0035287.1 mouse_genomes_project 9 110025088 110039391 - MGP_129S1SvImJ_P0094495 Bsn protein_coding protein_coding MGP_129S1SvImJ_T0095202.1 MGP_129S1SvImJ_G0035427.1 mouse_genomes_project 9 122747240 122777476 + MGP_129S1SvImJ_P0095202 Ttc21a protein_coding protein_coding MGP_129S1SvImJ_T0095203.1 MGP_129S1SvImJ_G0035427.1 mouse_genomes_project 9 122747269 122776736 + Ttc21a protein_coding retained_intron MGP_129S1SvImJ_T0095204.1 MGP_129S1SvImJ_G0035427.1 mouse_genomes_project 9 122747270 122772353 + Ttc21a protein_coding retained_intron MGP_129S1SvImJ_T0095205.1 MGP_129S1SvImJ_G0035427.1 mouse_genomes_project 9 122771294 122775852 + Ttc21a protein_coding retained_intron MGP_129S1SvImJ_T0092882.1 MGP_129S1SvImJ_G0034966.1 mouse_genomes_project 9 65475654 65619710 - MGP_129S1SvImJ_P0092882 Zfp609 protein_coding protein_coding MGP_129S1SvImJ_T0092883.1 MGP_129S1SvImJ_G0034966.1 mouse_genomes_project 9 65483134 65484409 - Zfp609 protein_coding processed_transcript MGP_129S1SvImJ_T0092884.1 MGP_129S1SvImJ_G0034966.1 mouse_genomes_project 9 65584432 65586887 - MGP_129S1SvImJ_P0092884 Zfp609 protein_coding protein_coding MGP_129S1SvImJ_T0092756.1 MGP_129S1SvImJ_G0034925.1 mouse_genomes_project 9 62430631 62445479 + MGP_129S1SvImJ_P0092756 Calml4 protein_coding protein_coding MGP_129S1SvImJ_T0092757.1 MGP_129S1SvImJ_G0034925.1 mouse_genomes_project 9 62430631 62445479 + MGP_129S1SvImJ_P0092757 Calml4 protein_coding protein_coding MGP_129S1SvImJ_T0092049.1 MGP_129S1SvImJ_G0034714.1 mouse_genomes_project 9 43113747 43154555 + MGP_129S1SvImJ_P0092049 Ddx6 protein_coding protein_coding MGP_129S1SvImJ_T0092050.1 MGP_129S1SvImJ_G0034714.1 mouse_genomes_project 9 43114064 43148290 + MGP_129S1SvImJ_P0092050 Ddx6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0009300.1 MGP_129S1SvImJ_G0007475.1 mouse_genomes_project 9 90753197 90792086 + 4930524O08Rik lincRNA lincRNA MGP_129S1SvImJ_T0009301.1 MGP_129S1SvImJ_G0007475.1 mouse_genomes_project 9 90753622 90766989 + 4930524O08Rik lincRNA lincRNA MGP_129S1SvImJ_T0009302.1 MGP_129S1SvImJ_G0007475.1 mouse_genomes_project 9 90753660 90766331 + 4930524O08Rik lincRNA lincRNA MGP_129S1SvImJ_T0002387.1 MGP_129S1SvImJ_G0002297.1 mouse_genomes_project 9 72037161 72039899 - TEC TEC MGP_129S1SvImJ_T0098667.1 MGP_129S1SvImJ_G0036752.1 mouse_genomes_project 9 88069644 88069778 + Gm24649 rRNA rRNA MGP_129S1SvImJ_T0091075.1 MGP_129S1SvImJ_G0034312.1 mouse_genomes_project 9 2060227 2068900 + MGP_129S1SvImJ_P0091075 Casp1 protein_coding protein_coding MGP_129S1SvImJ_T0091438.1 MGP_129S1SvImJ_G0034454.1 mouse_genomes_project 9 18726558 18729365 - MGP_129S1SvImJ_P0091438 Tmed1 protein_coding protein_coding MGP_129S1SvImJ_T0005574.1 MGP_129S1SvImJ_G0004705.1 mouse_genomes_project 9 117694318 117695774 - Gm26962 antisense antisense MGP_129S1SvImJ_T0092642.1 MGP_129S1SvImJ_G0034899.1 mouse_genomes_project 9 58733270 58833314 - MGP_129S1SvImJ_P0092642 Arih1 protein_coding protein_coding MGP_129S1SvImJ_T0092643.1 MGP_129S1SvImJ_G0034899.1 mouse_genomes_project 9 58738125 58833318 - MGP_129S1SvImJ_P0092643 Arih1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092644.1 MGP_129S1SvImJ_G0034899.1 mouse_genomes_project 9 58738306 58833047 - MGP_129S1SvImJ_P0092644 Arih1 protein_coding protein_coding MGP_129S1SvImJ_T0092645.1 MGP_129S1SvImJ_G0034899.1 mouse_genomes_project 9 58739891 58750824 - MGP_129S1SvImJ_P0092645 Arih1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092646.1 MGP_129S1SvImJ_G0034899.1 mouse_genomes_project 9 58739976 58751077 - Arih1 protein_coding retained_intron MGP_129S1SvImJ_T0092647.1 MGP_129S1SvImJ_G0034899.1 mouse_genomes_project 9 58770852 58832756 - Arih1 protein_coding retained_intron MGP_129S1SvImJ_T0092648.1 MGP_129S1SvImJ_G0034899.1 mouse_genomes_project 9 58782284 58832783 - Arih1 protein_coding retained_intron MGP_129S1SvImJ_T0091877.1 MGP_129S1SvImJ_G0034638.1 mouse_genomes_project 9 37746138 37747155 + MGP_129S1SvImJ_P0091877 Olfr148 protein_coding protein_coding MGP_129S1SvImJ_T0011125.1 MGP_129S1SvImJ_G0009241.1 mouse_genomes_project 9 112418057 112418180 + Mir6236 miRNA miRNA MGP_129S1SvImJ_T0092863.1 MGP_129S1SvImJ_G0034960.1 mouse_genomes_project 9 65196276 65223797 + MGP_129S1SvImJ_P0092863 Spg21 protein_coding protein_coding MGP_129S1SvImJ_T0091825.1 MGP_129S1SvImJ_G0034598.1 mouse_genomes_project 9 36500806 36501862 + MGP_129S1SvImJ_P0091825 Olfr902 protein_coding protein_coding MGP_129S1SvImJ_T0091285.1 MGP_129S1SvImJ_G0034384.1 mouse_genomes_project 9 16009373 16010309 + MGP_129S1SvImJ_P0091285 Olfr832 protein_coding protein_coding MGP_129S1SvImJ_T0002464.1 MGP_129S1SvImJ_G0002373.1 mouse_genomes_project 9 104723543 104726017 + TEC TEC MGP_129S1SvImJ_T0002474.1 MGP_129S1SvImJ_G0002383.1 mouse_genomes_project 9 107469438 107470063 + TEC TEC MGP_129S1SvImJ_T0011118.1 MGP_129S1SvImJ_G0009234.1 mouse_genomes_project 9 110032081 110032199 - miRNA miRNA MGP_129S1SvImJ_T0016123.1 MGP_129S1SvImJ_G0014212.1 mouse_genomes_project 9 93388313 93388841 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091878.1 MGP_129S1SvImJ_G0034639.1 mouse_genomes_project 9 37755692 37756759 + MGP_129S1SvImJ_P0091878 Olfr960 protein_coding protein_coding MGP_129S1SvImJ_T0002378.1 MGP_129S1SvImJ_G0002288.1 mouse_genomes_project 9 32320138 32321048 + TEC TEC MGP_129S1SvImJ_T0095088.1 MGP_129S1SvImJ_G0035396.1 mouse_genomes_project 9 117374189 117412171 - MGP_129S1SvImJ_P0095088 Gpd1l protein_coding protein_coding MGP_129S1SvImJ_T0095089.1 MGP_129S1SvImJ_G0035396.1 mouse_genomes_project 9 117378191 117412335 - MGP_129S1SvImJ_P0095089 Gpd1l protein_coding protein_coding MGP_129S1SvImJ_T0095090.1 MGP_129S1SvImJ_G0035396.1 mouse_genomes_project 9 117387678 117397802 - Gpd1l protein_coding processed_transcript MGP_129S1SvImJ_T0092981.1 MGP_129S1SvImJ_G0034986.1 mouse_genomes_project 9 67098226 67284477 - MGP_129S1SvImJ_P0092981 Tln2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0092982.1 MGP_129S1SvImJ_G0034986.1 mouse_genomes_project 9 67098234 67450935 - MGP_129S1SvImJ_P0092982 Tln2 protein_coding protein_coding MGP_129S1SvImJ_T0092983.1 MGP_129S1SvImJ_G0034986.1 mouse_genomes_project 9 67102284 67429137 - MGP_129S1SvImJ_P0092983 Tln2 protein_coding protein_coding MGP_129S1SvImJ_T0094981.1 MGP_129S1SvImJ_G0035369.1 mouse_genomes_project 9 113254983 113257766 - MGP_129S1SvImJ_P0094981 Ccrl2 protein_coding protein_coding MGP_129S1SvImJ_T0094982.1 MGP_129S1SvImJ_G0035369.1 mouse_genomes_project 9 113255328 113258015 - MGP_129S1SvImJ_P0094982 Ccrl2 protein_coding protein_coding MGP_129S1SvImJ_T0094983.1 MGP_129S1SvImJ_G0035369.1 mouse_genomes_project 9 113256525 113257742 - MGP_129S1SvImJ_P0094983 Ccrl2 protein_coding protein_coding MGP_129S1SvImJ_T0092702.1 MGP_129S1SvImJ_G0034914.1 mouse_genomes_project 9 60832550 60881529 + MGP_129S1SvImJ_P0092702 Tle3 protein_coding protein_coding MGP_129S1SvImJ_T0092703.1 MGP_129S1SvImJ_G0034914.1 mouse_genomes_project 9 60832567 60880941 + MGP_129S1SvImJ_P0092703 Tle3 protein_coding protein_coding MGP_129S1SvImJ_T0092704.1 MGP_129S1SvImJ_G0034914.1 mouse_genomes_project 9 60833042 60881519 + MGP_129S1SvImJ_P0092704 Tle3 protein_coding protein_coding MGP_129S1SvImJ_T0092705.1 MGP_129S1SvImJ_G0034914.1 mouse_genomes_project 9 60833403 60881518 + MGP_129S1SvImJ_P0092705 Tle3 protein_coding protein_coding MGP_129S1SvImJ_T0092706.1 MGP_129S1SvImJ_G0034914.1 mouse_genomes_project 9 60833565 60871395 + MGP_129S1SvImJ_P0092706 Tle3 protein_coding protein_coding MGP_129S1SvImJ_T0092707.1 MGP_129S1SvImJ_G0034914.1 mouse_genomes_project 9 60833569 60880873 + MGP_129S1SvImJ_P0092707 Tle3 protein_coding protein_coding MGP_129S1SvImJ_T0092708.1 MGP_129S1SvImJ_G0034914.1 mouse_genomes_project 9 60833600 60869339 + MGP_129S1SvImJ_P0092708 Tle3 protein_coding protein_coding MGP_129S1SvImJ_T0092709.1 MGP_129S1SvImJ_G0034914.1 mouse_genomes_project 9 60833601 60881522 + MGP_129S1SvImJ_P0092709 Tle3 protein_coding protein_coding MGP_129S1SvImJ_T0092710.1 MGP_129S1SvImJ_G0034914.1 mouse_genomes_project 9 60833622 60879756 + MGP_129S1SvImJ_P0092710 Tle3 protein_coding protein_coding MGP_129S1SvImJ_T0092711.1 MGP_129S1SvImJ_G0034914.1 mouse_genomes_project 9 60833666 60863782 + MGP_129S1SvImJ_P0092711 Tle3 protein_coding protein_coding MGP_129S1SvImJ_T0092712.1 MGP_129S1SvImJ_G0034914.1 mouse_genomes_project 9 60833698 60880016 + MGP_129S1SvImJ_P0092712 Tle3 protein_coding protein_coding MGP_129S1SvImJ_T0092713.1 MGP_129S1SvImJ_G0034914.1 mouse_genomes_project 9 60833719 60881112 + MGP_129S1SvImJ_P0092713 Tle3 protein_coding protein_coding MGP_129S1SvImJ_T0092714.1 MGP_129S1SvImJ_G0034914.1 mouse_genomes_project 9 60833856 60880016 + MGP_129S1SvImJ_P0092714 Tle3 protein_coding protein_coding MGP_129S1SvImJ_T0092715.1 MGP_129S1SvImJ_G0034914.1 mouse_genomes_project 9 60834514 60856523 + MGP_129S1SvImJ_P0092715 Tle3 protein_coding protein_coding MGP_129S1SvImJ_T0092716.1 MGP_129S1SvImJ_G0034914.1 mouse_genomes_project 9 60835709 60880016 + MGP_129S1SvImJ_P0092716 Tle3 protein_coding protein_coding MGP_129S1SvImJ_T0092717.1 MGP_129S1SvImJ_G0034914.1 mouse_genomes_project 9 60863748 60872164 + Tle3 protein_coding processed_transcript MGP_129S1SvImJ_T0092718.1 MGP_129S1SvImJ_G0034914.1 mouse_genomes_project 9 60864350 60880871 + Tle3 protein_coding retained_intron MGP_129S1SvImJ_T0092719.1 MGP_129S1SvImJ_G0034914.1 mouse_genomes_project 9 60871966 60881451 + Tle3 protein_coding processed_transcript MGP_129S1SvImJ_T0091150.1 MGP_129S1SvImJ_G0034337.1 mouse_genomes_project 9 5845044 5849038 + MGP_129S1SvImJ_P0091150 Gm16485 protein_coding protein_coding MGP_129S1SvImJ_T0093539.1 MGP_129S1SvImJ_G0035108.1 mouse_genomes_project 9 89284035 89334320 - MGP_129S1SvImJ_P0093539 Gm20537 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0093541.1 MGP_129S1SvImJ_G0035108.1 mouse_genomes_project 9 89298596 89334205 - MGP_129S1SvImJ_P0093541 Gm20537 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0101452.1 MGP_129S1SvImJ_G0039519.1 mouse_genomes_project 9 40659973 40660105 - Gm26272 snoRNA snoRNA MGP_129S1SvImJ_T0098404.1 MGP_129S1SvImJ_G0036489.1 mouse_genomes_project 9 16203888 16204837 + pseudogene pseudogene MGP_129S1SvImJ_T0016024.1 MGP_129S1SvImJ_G0014113.1 mouse_genomes_project 9 9823797 9824782 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0091903.1 MGP_129S1SvImJ_G0034664.1 mouse_genomes_project 9 38385676 38386692 + MGP_129S1SvImJ_P0091903 Olfr986 protein_coding protein_coding MGP_129S1SvImJ_T0101470.1 MGP_129S1SvImJ_G0039537.1 mouse_genomes_project 9 74042255 74042385 - Gm25105 snoRNA snoRNA MGP_129S1SvImJ_T0094630.1 MGP_129S1SvImJ_G0035308.1 mouse_genomes_project 9 110546224 110566654 - MGP_129S1SvImJ_P0094630 P4htm protein_coding protein_coding MGP_129S1SvImJ_T0094631.1 MGP_129S1SvImJ_G0035308.1 mouse_genomes_project 9 110546541 110546920 - P4htm protein_coding processed_transcript MGP_129S1SvImJ_T0094632.1 MGP_129S1SvImJ_G0035308.1 mouse_genomes_project 9 110547951 110550295 - P4htm protein_coding retained_intron MGP_129S1SvImJ_T0094633.1 MGP_129S1SvImJ_G0035308.1 mouse_genomes_project 9 110548909 110566563 - P4htm protein_coding retained_intron MGP_129S1SvImJ_T0094634.1 MGP_129S1SvImJ_G0035308.1 mouse_genomes_project 9 110550349 110566567 - MGP_129S1SvImJ_P0094634 P4htm protein_coding protein_coding MGP_129S1SvImJ_T0094635.1 MGP_129S1SvImJ_G0035308.1 mouse_genomes_project 9 110550349 110566333 - MGP_129S1SvImJ_P0094635 P4htm protein_coding protein_coding MGP_129S1SvImJ_T0094313.1 MGP_129S1SvImJ_G0035265.1 mouse_genomes_project 9 109502994 109524725 - MGP_129S1SvImJ_P0094313 Gnai2 protein_coding protein_coding MGP_129S1SvImJ_T0094314.1 MGP_129S1SvImJ_G0035265.1 mouse_genomes_project 9 109502994 109524670 - MGP_129S1SvImJ_P0094314 Gnai2 protein_coding protein_coding MGP_129S1SvImJ_T0094315.1 MGP_129S1SvImJ_G0035265.1 mouse_genomes_project 9 109503809 109504917 - Gnai2 protein_coding retained_intron MGP_129S1SvImJ_T0094316.1 MGP_129S1SvImJ_G0035265.1 mouse_genomes_project 9 109504525 109505381 - Gnai2 protein_coding retained_intron MGP_129S1SvImJ_T0094317.1 MGP_129S1SvImJ_G0035265.1 mouse_genomes_project 9 109505094 109506254 - Gnai2 protein_coding retained_intron MGP_129S1SvImJ_T0094318.1 MGP_129S1SvImJ_G0035265.1 mouse_genomes_project 9 109505369 109515988 - MGP_129S1SvImJ_P0094318 Gnai2 protein_coding protein_coding MGP_129S1SvImJ_T0094319.1 MGP_129S1SvImJ_G0035265.1 mouse_genomes_project 9 109508585 109524692 - Gnai2 protein_coding retained_intron MGP_129S1SvImJ_T0094320.1 MGP_129S1SvImJ_G0035265.1 mouse_genomes_project 9 109509021 109509954 - Gnai2 protein_coding retained_intron MGP_129S1SvImJ_T0094321.1 MGP_129S1SvImJ_G0035265.1 mouse_genomes_project 9 109509143 109524695 - MGP_129S1SvImJ_P0094321 Gnai2 protein_coding protein_coding MGP_129S1SvImJ_T0094322.1 MGP_129S1SvImJ_G0035265.1 mouse_genomes_project 9 109524457 109524701 - MGP_129S1SvImJ_P0094322 Gnai2 protein_coding protein_coding MGP_129S1SvImJ_T0095365.1 MGP_129S1SvImJ_G0035480.1 mouse_genomes_project 9 126692717 126736219 - MGP_129S1SvImJ_P0095365 Slc6a20a protein_coding protein_coding MGP_129S1SvImJ_T0095366.1 MGP_129S1SvImJ_G0035480.1 mouse_genomes_project 9 126693595 126736219 - MGP_129S1SvImJ_P0095366 Slc6a20a protein_coding protein_coding MGP_129S1SvImJ_T0095367.1 MGP_129S1SvImJ_G0035480.1 mouse_genomes_project 9 126712394 126736195 - MGP_129S1SvImJ_P0095367 Slc6a20a protein_coding protein_coding MGP_129S1SvImJ_T0092121.1 MGP_129S1SvImJ_G0034733.1 mouse_genomes_project 9 43719780 43752281 - MGP_129S1SvImJ_P0092121 Tmprss4 protein_coding protein_coding MGP_129S1SvImJ_T0092122.1 MGP_129S1SvImJ_G0034733.1 mouse_genomes_project 9 43719781 43752279 - MGP_129S1SvImJ_P0092122 Tmprss4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092123.1 MGP_129S1SvImJ_G0034733.1 mouse_genomes_project 9 43720359 43752249 - Tmprss4 protein_coding processed_transcript MGP_129S1SvImJ_T0092124.1 MGP_129S1SvImJ_G0034733.1 mouse_genomes_project 9 43720359 43752165 - MGP_129S1SvImJ_P0092124 Tmprss4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0092125.1 MGP_129S1SvImJ_G0034733.1 mouse_genomes_project 9 43721850 43727783 - Tmprss4 protein_coding retained_intron MGP_129S1SvImJ_T0016159.1 MGP_129S1SvImJ_G0014248.1 mouse_genomes_project 9 107282185 107282588 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0094893.1 MGP_129S1SvImJ_G0035350.1 mouse_genomes_project 9 112694622 112784422 + MGP_129S1SvImJ_P0094893 Setd2 protein_coding protein_coding MGP_129S1SvImJ_T0094894.1 MGP_129S1SvImJ_G0035350.1 mouse_genomes_project 9 112709991 112784403 + MGP_129S1SvImJ_P0094894 Setd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094895.1 MGP_129S1SvImJ_G0035350.1 mouse_genomes_project 9 112713317 112726435 + MGP_129S1SvImJ_P0094895 Setd2 protein_coding protein_coding MGP_129S1SvImJ_T0094896.1 MGP_129S1SvImJ_G0035350.1 mouse_genomes_project 9 112723143 112729759 + Setd2 protein_coding retained_intron MGP_129S1SvImJ_T0094897.1 MGP_129S1SvImJ_G0035350.1 mouse_genomes_project 9 112723225 112732552 + Setd2 protein_coding retained_intron MGP_129S1SvImJ_T0094898.1 MGP_129S1SvImJ_G0035350.1 mouse_genomes_project 9 112735400 112784396 + MGP_129S1SvImJ_P0094898 Setd2 protein_coding protein_coding MGP_129S1SvImJ_T0094899.1 MGP_129S1SvImJ_G0035350.1 mouse_genomes_project 9 112735662 112756961 + MGP_129S1SvImJ_P0094899 Setd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094900.1 MGP_129S1SvImJ_G0035350.1 mouse_genomes_project 9 112756825 112769283 + Setd2 protein_coding retained_intron MGP_129S1SvImJ_T0094901.1 MGP_129S1SvImJ_G0035350.1 mouse_genomes_project 9 112766321 112783937 + MGP_129S1SvImJ_P0094901 Setd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0094902.1 MGP_129S1SvImJ_G0035350.1 mouse_genomes_project 9 112783389 112784396 + Setd2 protein_coding retained_intron MGP_129S1SvImJ_T0091592.1 MGP_129S1SvImJ_G0034512.1 mouse_genomes_project 9 28041049 28081985 + MGP_129S1SvImJ_P0091592 Snx19 protein_coding protein_coding MGP_129S1SvImJ_T0094758.1 MGP_129S1SvImJ_G0035327.1 mouse_genomes_project 9 111053966 111079331 + MGP_129S1SvImJ_P0094758 Plxnb1 protein_coding protein_coding MGP_129S1SvImJ_T0094759.1 MGP_129S1SvImJ_G0035327.1 mouse_genomes_project 9 111054521 111059090 + MGP_129S1SvImJ_P0094759 Plxnb1 protein_coding protein_coding MGP_129S1SvImJ_T0094760.1 MGP_129S1SvImJ_G0035327.1 mouse_genomes_project 9 111055279 111059090 + MGP_129S1SvImJ_P0094760 Plxnb1 protein_coding protein_coding MGP_129S1SvImJ_T0094761.1 MGP_129S1SvImJ_G0035327.1 mouse_genomes_project 9 111063570 111068293 + MGP_129S1SvImJ_P0094761 Plxnb1 protein_coding protein_coding MGP_129S1SvImJ_T0094762.1 MGP_129S1SvImJ_G0035327.1 mouse_genomes_project 9 111064119 111065426 + Plxnb1 protein_coding retained_intron MGP_129S1SvImJ_T0094763.1 MGP_129S1SvImJ_G0035327.1 mouse_genomes_project 9 111064581 111065550 + Plxnb1 protein_coding retained_intron MGP_129S1SvImJ_T0094764.1 MGP_129S1SvImJ_G0035327.1 mouse_genomes_project 9 111065412 111068322 + Plxnb1 protein_coding retained_intron MGP_129S1SvImJ_T0095082.1 MGP_129S1SvImJ_G0035391.1 mouse_genomes_project 9 117022858 117085810 - MGP_129S1SvImJ_P0095082 Cnot10 protein_coding protein_coding MGP_129S1SvImJ_T0095288.1 MGP_129S1SvImJ_G0035449.1 mouse_genomes_project 9 124733677 124744198 + MGP_129S1SvImJ_P0095288 Klhl40 protein_coding protein_coding MGP_129S1SvImJ_T0091593.1 MGP_129S1SvImJ_G0034513.1 mouse_genomes_project 9 28535526 28558761 - MGP_129S1SvImJ_P0091593 Adamts15 protein_coding protein_coding MGP_129S1SvImJ_T0091212.1 MGP_129S1SvImJ_G0034356.1 mouse_genomes_project 9 11738338 11795004 + MGP_129S1SvImJ_P0091212 Mre11a protein_coding protein_coding MGP_129S1SvImJ_T0091213.1 MGP_129S1SvImJ_G0034356.1 mouse_genomes_project 9 11738360 11797481 + MGP_129S1SvImJ_P0091213 Mre11a protein_coding protein_coding MGP_129S1SvImJ_T0091214.1 MGP_129S1SvImJ_G0034356.1 mouse_genomes_project 9 11738386 11753325 + MGP_129S1SvImJ_P0091214 Mre11a protein_coding protein_coding MGP_129S1SvImJ_T0091215.1 MGP_129S1SvImJ_G0034356.1 mouse_genomes_project 9 11750862 11767865 + MGP_129S1SvImJ_P0091215 Mre11a protein_coding protein_coding MGP_129S1SvImJ_T0091216.1 MGP_129S1SvImJ_G0034356.1 mouse_genomes_project 9 11750875 11757535 + MGP_129S1SvImJ_P0091216 Mre11a protein_coding protein_coding MGP_129S1SvImJ_T0093767.1 MGP_129S1SvImJ_G0035156.1 mouse_genomes_project 9 99868735 99872331 + Copb2 protein_coding retained_intron MGP_129S1SvImJ_T0093768.1 MGP_129S1SvImJ_G0035156.1 mouse_genomes_project 9 99868745 99894974 + MGP_129S1SvImJ_P0093768 Copb2 protein_coding protein_coding MGP_129S1SvImJ_T0093769.1 MGP_129S1SvImJ_G0035156.1 mouse_genomes_project 9 99886542 99887814 + Copb2 protein_coding retained_intron MGP_129S1SvImJ_T0093770.1 MGP_129S1SvImJ_G0035156.1 mouse_genomes_project 9 99893436 99894421 + Copb2 protein_coding retained_intron MGP_129S1SvImJ_T0093771.1 MGP_129S1SvImJ_G0035156.1 mouse_genomes_project 9 99893937 99894623 + Copb2 protein_coding retained_intron MGP_129S1SvImJ_T0093772.1 MGP_129S1SvImJ_G0035156.1 mouse_genomes_project 9 99894138 99894853 + Copb2 protein_coding retained_intron MGP_129S1SvImJ_T0093245.1 MGP_129S1SvImJ_G0035040.1 mouse_genomes_project 9 75755116 75781988 + MGP_129S1SvImJ_P0093245 Leo1 protein_coding protein_coding MGP_129S1SvImJ_T0100152.1 MGP_129S1SvImJ_G0038219.1 mouse_genomes_project 9 3570453 3570558 - Gm23097 snRNA snRNA MGP_129S1SvImJ_T0005575.1 MGP_129S1SvImJ_G0004706.1 mouse_genomes_project 9 118539652 118552031 - Gm16142 antisense antisense MGP_129S1SvImJ_T0002389.1 MGP_129S1SvImJ_G0002299.1 mouse_genomes_project 9 72124658 72126953 - TEC TEC MGP_129S1SvImJ_T0028742.1 MGP_129S1SvImJ_G0018210.1 mouse_genomes_project 11 47986720 47987557 - MGP_129S1SvImJ_P0028742 Psme2b protein_coding protein_coding MGP_129S1SvImJ_T0009774.1 MGP_129S1SvImJ_G0007890.1 mouse_genomes_project 11 111441365 111441434 + Mir7223 miRNA miRNA MGP_129S1SvImJ_T0102126.1 MGP_129S1SvImJ_G0039961.1 mouse_genomes_project 11 25607528 25608482 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0009669.1 MGP_129S1SvImJ_G0007785.1 mouse_genomes_project 11 21800488 21800593 + Gm44381 miRNA miRNA MGP_129S1SvImJ_T0029753.1 MGP_129S1SvImJ_G0018482.1 mouse_genomes_project 11 67301939 67312074 + MGP_129S1SvImJ_P0029753 Tmem220 protein_coding protein_coding MGP_129S1SvImJ_T0029754.1 MGP_129S1SvImJ_G0018482.1 mouse_genomes_project 11 67301939 67311588 + MGP_129S1SvImJ_P0029754 Tmem220 protein_coding protein_coding MGP_129S1SvImJ_T0034157.1 MGP_129S1SvImJ_G0019521.1 mouse_genomes_project 11 125153915 125155287 + Aspscr1 protein_coding retained_intron MGP_129S1SvImJ_T0034158.1 MGP_129S1SvImJ_G0019521.1 mouse_genomes_project 11 125153968 125156861 + Aspscr1 protein_coding retained_intron MGP_129S1SvImJ_T0034159.1 MGP_129S1SvImJ_G0019521.1 mouse_genomes_project 11 125154005 125186840 + MGP_129S1SvImJ_P0034159 Aspscr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034160.1 MGP_129S1SvImJ_G0019521.1 mouse_genomes_project 11 125154011 125194365 + MGP_129S1SvImJ_P0034160 Aspscr1 protein_coding protein_coding MGP_129S1SvImJ_T0034161.1 MGP_129S1SvImJ_G0019521.1 mouse_genomes_project 11 125154025 125193987 + MGP_129S1SvImJ_P0034161 Aspscr1 protein_coding protein_coding MGP_129S1SvImJ_T0034162.1 MGP_129S1SvImJ_G0019521.1 mouse_genomes_project 11 125154040 125174185 + MGP_129S1SvImJ_P0034162 Aspscr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034163.1 MGP_129S1SvImJ_G0019521.1 mouse_genomes_project 11 125154301 125174288 + MGP_129S1SvImJ_P0034163 Aspscr1 protein_coding protein_coding MGP_129S1SvImJ_T0034164.1 MGP_129S1SvImJ_G0019521.1 mouse_genomes_project 11 125154316 125174284 + MGP_129S1SvImJ_P0034164 Aspscr1 protein_coding protein_coding MGP_129S1SvImJ_T0034165.1 MGP_129S1SvImJ_G0019521.1 mouse_genomes_project 11 125154316 125159332 + MGP_129S1SvImJ_P0034165 Aspscr1 protein_coding protein_coding MGP_129S1SvImJ_T0034166.1 MGP_129S1SvImJ_G0019521.1 mouse_genomes_project 11 125154334 125174244 + MGP_129S1SvImJ_P0034166 Aspscr1 protein_coding protein_coding MGP_129S1SvImJ_T0034167.1 MGP_129S1SvImJ_G0019521.1 mouse_genomes_project 11 125154346 125171818 + MGP_129S1SvImJ_P0034167 Aspscr1 protein_coding protein_coding MGP_129S1SvImJ_T0034168.1 MGP_129S1SvImJ_G0019521.1 mouse_genomes_project 11 125157539 125194357 + MGP_129S1SvImJ_P0034168 Aspscr1 protein_coding protein_coding MGP_129S1SvImJ_T0034169.1 MGP_129S1SvImJ_G0019521.1 mouse_genomes_project 11 125158104 125159324 + MGP_129S1SvImJ_P0034169 Aspscr1 protein_coding protein_coding MGP_129S1SvImJ_T0034170.1 MGP_129S1SvImJ_G0019521.1 mouse_genomes_project 11 125158217 125174414 + MGP_129S1SvImJ_P0034170 Aspscr1 protein_coding protein_coding MGP_129S1SvImJ_T0034171.1 MGP_129S1SvImJ_G0019521.1 mouse_genomes_project 11 125171809 125194358 + MGP_129S1SvImJ_P0034171 Aspscr1 protein_coding protein_coding MGP_129S1SvImJ_T0034172.1 MGP_129S1SvImJ_G0019521.1 mouse_genomes_project 11 125174390 125194358 + MGP_129S1SvImJ_P0034172 Aspscr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034173.1 MGP_129S1SvImJ_G0019521.1 mouse_genomes_project 11 125174426 125194156 + MGP_129S1SvImJ_P0034173 Aspscr1 protein_coding protein_coding MGP_129S1SvImJ_T0034174.1 MGP_129S1SvImJ_G0019521.1 mouse_genomes_project 11 125187789 125194359 + MGP_129S1SvImJ_P0034174 Aspscr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034175.1 MGP_129S1SvImJ_G0019521.1 mouse_genomes_project 11 125193572 125194357 + Aspscr1 protein_coding retained_intron MGP_129S1SvImJ_T0034176.1 MGP_129S1SvImJ_G0019521.1 mouse_genomes_project 11 125193674 125194362 + Aspscr1 protein_coding retained_intron MGP_129S1SvImJ_T0034177.1 MGP_129S1SvImJ_G0019521.1 mouse_genomes_project 11 125193772 125194360 + Aspscr1 protein_coding retained_intron MGP_129S1SvImJ_T0027799.1 MGP_129S1SvImJ_G0017979.1 mouse_genomes_project 11 1150806 1154991 + MGP_129S1SvImJ_P0027799 Gatsl3 protein_coding protein_coding MGP_129S1SvImJ_T0031931.1 MGP_129S1SvImJ_G0019013.1 mouse_genomes_project 11 99171993 99178593 - MGP_129S1SvImJ_P0031931 Nfe2l1 protein_coding protein_coding MGP_129S1SvImJ_T0031932.1 MGP_129S1SvImJ_G0019013.1 mouse_genomes_project 11 99171993 99184517 - MGP_129S1SvImJ_P0031932 Nfe2l1 protein_coding protein_coding MGP_129S1SvImJ_T0031933.1 MGP_129S1SvImJ_G0019013.1 mouse_genomes_project 11 99172178 99182299 - MGP_129S1SvImJ_P0031933 Nfe2l1 protein_coding protein_coding MGP_129S1SvImJ_T0031934.1 MGP_129S1SvImJ_G0019013.1 mouse_genomes_project 11 99174672 99178707 - MGP_129S1SvImJ_P0031934 Nfe2l1 protein_coding protein_coding MGP_129S1SvImJ_T0031935.1 MGP_129S1SvImJ_G0019013.1 mouse_genomes_project 11 99175049 99178588 - MGP_129S1SvImJ_P0031935 Nfe2l1 protein_coding protein_coding MGP_129S1SvImJ_T0031936.1 MGP_129S1SvImJ_G0019013.1 mouse_genomes_project 11 99175925 99177305 - Nfe2l1 protein_coding processed_transcript MGP_129S1SvImJ_T0031937.1 MGP_129S1SvImJ_G0019013.1 mouse_genomes_project 11 99176802 99179132 - Nfe2l1 protein_coding processed_transcript MGP_129S1SvImJ_T0031938.1 MGP_129S1SvImJ_G0019013.1 mouse_genomes_project 11 99182312 99184081 - Nfe2l1 protein_coding processed_transcript MGP_129S1SvImJ_T0006295.1 MGP_129S1SvImJ_G0005259.1 mouse_genomes_project 11 76519873 76538074 - Gm26836 lincRNA lincRNA MGP_129S1SvImJ_T0032262.1 MGP_129S1SvImJ_G0019094.1 mouse_genomes_project 11 102146461 102161625 - MGP_129S1SvImJ_P0032262 Krt23 protein_coding protein_coding MGP_129S1SvImJ_T0030934.1 MGP_129S1SvImJ_G0018758.1 mouse_genomes_project 11 78888525 78937694 + MGP_129S1SvImJ_P0030934 Sez6 protein_coding protein_coding MGP_129S1SvImJ_T0030935.1 MGP_129S1SvImJ_G0018758.1 mouse_genomes_project 11 78888564 78937694 + Sez6 protein_coding retained_intron MGP_129S1SvImJ_T0030936.1 MGP_129S1SvImJ_G0018758.1 mouse_genomes_project 11 78888642 78922754 + Sez6 protein_coding retained_intron MGP_129S1SvImJ_T0030937.1 MGP_129S1SvImJ_G0018758.1 mouse_genomes_project 11 78888737 78937686 + MGP_129S1SvImJ_P0030937 Sez6 protein_coding protein_coding MGP_129S1SvImJ_T0030938.1 MGP_129S1SvImJ_G0018758.1 mouse_genomes_project 11 78888764 78936707 + Sez6 protein_coding retained_intron MGP_129S1SvImJ_T0030939.1 MGP_129S1SvImJ_G0018758.1 mouse_genomes_project 11 78910082 78913540 + Sez6 protein_coding processed_transcript MGP_129S1SvImJ_T0030940.1 MGP_129S1SvImJ_G0018758.1 mouse_genomes_project 11 78912630 78937694 + MGP_129S1SvImJ_P0030940 Sez6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030941.1 MGP_129S1SvImJ_G0018758.1 mouse_genomes_project 11 78927644 78933134 + MGP_129S1SvImJ_P0030941 Sez6 protein_coding protein_coding MGP_129S1SvImJ_T0030942.1 MGP_129S1SvImJ_G0018758.1 mouse_genomes_project 11 78931818 78933020 + Sez6 protein_coding retained_intron MGP_129S1SvImJ_T0028524.1 MGP_129S1SvImJ_G0018148.1 mouse_genomes_project 11 32295796 32306413 + MGP_129S1SvImJ_P0028524 Kcnmb1 protein_coding protein_coding MGP_129S1SvImJ_T0032737.1 MGP_129S1SvImJ_G0019232.1 mouse_genomes_project 11 105314973 105331832 - MGP_129S1SvImJ_P0032737 Slc4a1 protein_coding protein_coding MGP_129S1SvImJ_T0032738.1 MGP_129S1SvImJ_G0019232.1 mouse_genomes_project 11 105325636 105327123 - Slc4a1 protein_coding processed_transcript MGP_129S1SvImJ_T0032739.1 MGP_129S1SvImJ_G0019232.1 mouse_genomes_project 11 105326716 105330256 - Slc4a1 protein_coding processed_transcript MGP_129S1SvImJ_T0032740.1 MGP_129S1SvImJ_G0019232.1 mouse_genomes_project 11 105326749 105331799 - Slc4a1 protein_coding processed_transcript MGP_129S1SvImJ_T0032741.1 MGP_129S1SvImJ_G0019232.1 mouse_genomes_project 11 105327938 105332755 - Slc4a1 protein_coding processed_transcript MGP_129S1SvImJ_T0031622.1 MGP_129S1SvImJ_G0018935.1 mouse_genomes_project 11 91779458 91801709 - MGP_129S1SvImJ_P0031622 Pctp protein_coding protein_coding MGP_129S1SvImJ_T0027818.1 MGP_129S1SvImJ_G0017984.1 mouse_genomes_project 11 1588388 1590017 + MGP_129S1SvImJ_P0027818 Gm11032 protein_coding protein_coding MGP_129S1SvImJ_T0029775.1 MGP_129S1SvImJ_G0018488.1 mouse_genomes_project 11 67533504 67555896 + MGP_129S1SvImJ_P0029775 Myh4 protein_coding protein_coding MGP_129S1SvImJ_T0029776.1 MGP_129S1SvImJ_G0018488.1 mouse_genomes_project 11 67536072 67555855 + MGP_129S1SvImJ_P0029776 Myh4 protein_coding protein_coding MGP_129S1SvImJ_T0028143.1 MGP_129S1SvImJ_G0018059.1 mouse_genomes_project 11 14661818 14667150 + C1d protein_coding processed_transcript MGP_129S1SvImJ_T0028144.1 MGP_129S1SvImJ_G0018059.1 mouse_genomes_project 11 14661831 14668534 + C1d protein_coding processed_transcript MGP_129S1SvImJ_T0028145.1 MGP_129S1SvImJ_G0018059.1 mouse_genomes_project 11 14661833 14673416 + MGP_129S1SvImJ_P0028145 C1d protein_coding protein_coding MGP_129S1SvImJ_T0028146.1 MGP_129S1SvImJ_G0018059.1 mouse_genomes_project 11 14661927 14670864 + MGP_129S1SvImJ_P0028146 C1d protein_coding protein_coding MGP_129S1SvImJ_T0028147.1 MGP_129S1SvImJ_G0018059.1 mouse_genomes_project 11 14667860 14670800 + C1d protein_coding processed_transcript MGP_129S1SvImJ_T0031902.1 MGP_129S1SvImJ_G0019007.1 mouse_genomes_project 11 98636480 98661028 + MGP_129S1SvImJ_P0031902 Hoxb3 protein_coding protein_coding MGP_129S1SvImJ_T0031903.1 MGP_129S1SvImJ_G0019007.1 mouse_genomes_project 11 98641206 98657401 + MGP_129S1SvImJ_P0031903 Hoxb3 protein_coding protein_coding MGP_129S1SvImJ_T0031904.1 MGP_129S1SvImJ_G0019007.1 mouse_genomes_project 11 98654058 98654872 + Hoxb3 protein_coding processed_transcript MGP_129S1SvImJ_T0031905.1 MGP_129S1SvImJ_G0019007.1 mouse_genomes_project 11 98656866 98659605 + MGP_129S1SvImJ_P0031905 Hoxb3 protein_coding protein_coding MGP_129S1SvImJ_T0031060.1 MGP_129S1SvImJ_G0018785.1 mouse_genomes_project 11 79532027 79542519 + MGP_129S1SvImJ_P0031060 Poldip2 protein_coding protein_coding MGP_129S1SvImJ_T0031061.1 MGP_129S1SvImJ_G0018785.1 mouse_genomes_project 11 79532222 79533818 + Poldip2 protein_coding processed_transcript MGP_129S1SvImJ_T0031062.1 MGP_129S1SvImJ_G0018785.1 mouse_genomes_project 11 79532250 79541954 + MGP_129S1SvImJ_P0031062 Poldip2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031063.1 MGP_129S1SvImJ_G0018785.1 mouse_genomes_project 11 79536066 79537721 + Poldip2 protein_coding retained_intron MGP_129S1SvImJ_T0031064.1 MGP_129S1SvImJ_G0018785.1 mouse_genomes_project 11 79536656 79538374 + Poldip2 protein_coding retained_intron MGP_129S1SvImJ_T0031065.1 MGP_129S1SvImJ_G0018785.1 mouse_genomes_project 11 79538119 79539050 + Poldip2 protein_coding retained_intron MGP_129S1SvImJ_T0031759.1 MGP_129S1SvImJ_G0018963.1 mouse_genomes_project 11 96738954 96754412 + MGP_129S1SvImJ_P0031759 Lrrc59 protein_coding protein_coding MGP_129S1SvImJ_T0031760.1 MGP_129S1SvImJ_G0018963.1 mouse_genomes_project 11 96739001 96744449 + Lrrc59 protein_coding retained_intron MGP_129S1SvImJ_T0031358.1 MGP_129S1SvImJ_G0018873.1 mouse_genomes_project 11 86281518 86325430 - MGP_129S1SvImJ_P0031358 Ggnbp2 protein_coding protein_coding MGP_129S1SvImJ_T0031359.1 MGP_129S1SvImJ_G0018873.1 mouse_genomes_project 11 86281518 86325402 - MGP_129S1SvImJ_P0031359 Ggnbp2 protein_coding protein_coding MGP_129S1SvImJ_T0031360.1 MGP_129S1SvImJ_G0018873.1 mouse_genomes_project 11 86281518 86325351 - MGP_129S1SvImJ_P0031360 Ggnbp2 protein_coding protein_coding MGP_129S1SvImJ_T0031361.1 MGP_129S1SvImJ_G0018873.1 mouse_genomes_project 11 86281963 86321167 - MGP_129S1SvImJ_P0031361 Ggnbp2 protein_coding protein_coding MGP_129S1SvImJ_T0031362.1 MGP_129S1SvImJ_G0018873.1 mouse_genomes_project 11 86282018 86325259 - MGP_129S1SvImJ_P0031362 Ggnbp2 protein_coding protein_coding MGP_129S1SvImJ_T0031363.1 MGP_129S1SvImJ_G0018873.1 mouse_genomes_project 11 86282129 86325353 - MGP_129S1SvImJ_P0031363 Ggnbp2 protein_coding protein_coding MGP_129S1SvImJ_T0031364.1 MGP_129S1SvImJ_G0018873.1 mouse_genomes_project 11 86283293 86286983 - MGP_129S1SvImJ_P0031364 Ggnbp2 protein_coding protein_coding MGP_129S1SvImJ_T0031365.1 MGP_129S1SvImJ_G0018873.1 mouse_genomes_project 11 86283669 86325338 - MGP_129S1SvImJ_P0031365 Ggnbp2 protein_coding protein_coding MGP_129S1SvImJ_T0031366.1 MGP_129S1SvImJ_G0018873.1 mouse_genomes_project 11 86286935 86288499 - Ggnbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0031367.1 MGP_129S1SvImJ_G0018873.1 mouse_genomes_project 11 86302864 86308957 - Ggnbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0031368.1 MGP_129S1SvImJ_G0018873.1 mouse_genomes_project 11 86304432 86311122 - Ggnbp2 protein_coding retained_intron MGP_129S1SvImJ_T0031369.1 MGP_129S1SvImJ_G0018873.1 mouse_genomes_project 11 86311181 86325104 - MGP_129S1SvImJ_P0031369 Ggnbp2 protein_coding protein_coding MGP_129S1SvImJ_T0031370.1 MGP_129S1SvImJ_G0018873.1 mouse_genomes_project 11 86319791 86325392 - Ggnbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0030585.1 MGP_129S1SvImJ_G0018669.1 mouse_genomes_project 11 74281223 74282162 - MGP_129S1SvImJ_P0030585 Olfr385 protein_coding protein_coding MGP_129S1SvImJ_T0012475.1 MGP_129S1SvImJ_G0010564.1 mouse_genomes_project 11 1163083 1163595 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029715.1 MGP_129S1SvImJ_G0018473.1 mouse_genomes_project 11 65165971 65189576 + MGP_129S1SvImJ_P0029715 Elac2 protein_coding protein_coding MGP_129S1SvImJ_T0029716.1 MGP_129S1SvImJ_G0018473.1 mouse_genomes_project 11 65166004 65188835 + MGP_129S1SvImJ_P0029716 Elac2 protein_coding protein_coding MGP_129S1SvImJ_T0029717.1 MGP_129S1SvImJ_G0018473.1 mouse_genomes_project 11 65166005 65167575 + Elac2 protein_coding processed_transcript MGP_129S1SvImJ_T0029718.1 MGP_129S1SvImJ_G0018473.1 mouse_genomes_project 11 65166007 65189107 + MGP_129S1SvImJ_P0029718 Elac2 protein_coding protein_coding MGP_129S1SvImJ_T0029719.1 MGP_129S1SvImJ_G0018473.1 mouse_genomes_project 11 65166024 65189574 + Elac2 protein_coding processed_transcript MGP_129S1SvImJ_T0029720.1 MGP_129S1SvImJ_G0018473.1 mouse_genomes_project 11 65172388 65179404 + MGP_129S1SvImJ_P0029720 Elac2 protein_coding protein_coding MGP_129S1SvImJ_T0029721.1 MGP_129S1SvImJ_G0018473.1 mouse_genomes_project 11 65187842 65189395 + Elac2 protein_coding processed_transcript MGP_129S1SvImJ_T0031497.1 MGP_129S1SvImJ_G0018904.1 mouse_genomes_project 11 89009562 89181408 + MGP_129S1SvImJ_P0031497 Tex14 protein_coding protein_coding MGP_129S1SvImJ_T0031498.1 MGP_129S1SvImJ_G0018904.1 mouse_genomes_project 11 89033823 89104746 + MGP_129S1SvImJ_P0031498 Tex14 protein_coding protein_coding MGP_129S1SvImJ_T0031499.1 MGP_129S1SvImJ_G0018904.1 mouse_genomes_project 11 89161146 89180542 + MGP_129S1SvImJ_P0031499 Tex14 protein_coding protein_coding MGP_129S1SvImJ_T0031500.1 MGP_129S1SvImJ_G0018904.1 mouse_genomes_project 11 89163426 89181404 + MGP_129S1SvImJ_P0031500 Tex14 protein_coding protein_coding MGP_129S1SvImJ_T0031501.1 MGP_129S1SvImJ_G0018904.1 mouse_genomes_project 11 89167553 89181251 + Tex14 protein_coding processed_transcript MGP_129S1SvImJ_T0028606.1 MGP_129S1SvImJ_G0018170.1 mouse_genomes_project 11 41897040 41906636 + Atp10b protein_coding processed_transcript MGP_129S1SvImJ_T0028607.1 MGP_129S1SvImJ_G0018170.1 mouse_genomes_project 11 41898751 42009244 + MGP_129S1SvImJ_P0028607 Atp10b protein_coding protein_coding MGP_129S1SvImJ_T0028608.1 MGP_129S1SvImJ_G0018170.1 mouse_genomes_project 11 41903022 41949706 + Atp10b protein_coding processed_transcript MGP_129S1SvImJ_T0101616.1 MGP_129S1SvImJ_G0039661.1 mouse_genomes_project 11 121658912 121659988 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101617.1 MGP_129S1SvImJ_G0039661.1 mouse_genomes_project 11 121658971 121659398 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0003304.1 MGP_129S1SvImJ_G0003054.1 mouse_genomes_project 11 101163986 101164769 + antisense antisense MGP_129S1SvImJ_T0033496.1 MGP_129S1SvImJ_G0019396.1 mouse_genomes_project 11 119650799 119655770 - Mif4gd protein_coding processed_transcript MGP_129S1SvImJ_T0033497.1 MGP_129S1SvImJ_G0019396.1 mouse_genomes_project 11 119650799 119655810 - Mif4gd protein_coding processed_transcript MGP_129S1SvImJ_T0033498.1 MGP_129S1SvImJ_G0019396.1 mouse_genomes_project 11 119650799 119655852 - MGP_129S1SvImJ_P0033498 Mif4gd protein_coding protein_coding MGP_129S1SvImJ_T0033499.1 MGP_129S1SvImJ_G0019396.1 mouse_genomes_project 11 119650799 119655386 - MGP_129S1SvImJ_P0033499 Mif4gd protein_coding protein_coding MGP_129S1SvImJ_T0033500.1 MGP_129S1SvImJ_G0019396.1 mouse_genomes_project 11 119651030 119655761 - MGP_129S1SvImJ_P0033500 Mif4gd protein_coding protein_coding MGP_129S1SvImJ_T0033501.1 MGP_129S1SvImJ_G0019396.1 mouse_genomes_project 11 119651088 119655713 - Mif4gd protein_coding processed_transcript MGP_129S1SvImJ_T0033502.1 MGP_129S1SvImJ_G0019396.1 mouse_genomes_project 11 119651298 119655782 - Mif4gd protein_coding processed_transcript MGP_129S1SvImJ_T0033503.1 MGP_129S1SvImJ_G0019396.1 mouse_genomes_project 11 119651393 119655009 - MGP_129S1SvImJ_P0033503 Mif4gd protein_coding protein_coding MGP_129S1SvImJ_T0033504.1 MGP_129S1SvImJ_G0019396.1 mouse_genomes_project 11 119652058 119655787 - Mif4gd protein_coding processed_transcript MGP_129S1SvImJ_T0033505.1 MGP_129S1SvImJ_G0019396.1 mouse_genomes_project 11 119654984 119655803 - Mif4gd protein_coding processed_transcript MGP_129S1SvImJ_T0017208.1 MGP_129S1SvImJ_G0015163.1 mouse_genomes_project 11 28307820 28323827 + Gm8098 processed_transcript processed_transcript MGP_129S1SvImJ_T0029223.1 MGP_129S1SvImJ_G0018341.1 mouse_genomes_project 11 57675433 57730843 + MGP_129S1SvImJ_P0029223 Larp1 protein_coding protein_coding MGP_129S1SvImJ_T0029224.1 MGP_129S1SvImJ_G0018341.1 mouse_genomes_project 11 57675433 57730846 + MGP_129S1SvImJ_P0029224 Larp1 protein_coding protein_coding MGP_129S1SvImJ_T0029225.1 MGP_129S1SvImJ_G0018341.1 mouse_genomes_project 11 57710492 57711892 + Larp1 protein_coding retained_intron MGP_129S1SvImJ_T0009662.1 MGP_129S1SvImJ_G0007778.1 mouse_genomes_project 11 2057568 2057672 + miRNA miRNA MGP_129S1SvImJ_T0032275.1 MGP_129S1SvImJ_G0019105.1 mouse_genomes_project 11 102295045 102296886 - MGP_129S1SvImJ_P0032275 Krtap2-4 protein_coding protein_coding MGP_129S1SvImJ_T0003376.1 MGP_129S1SvImJ_G0003111.1 mouse_genomes_project 11 122767603 122778429 - Gm11747 antisense antisense MGP_129S1SvImJ_T0028793.1 MGP_129S1SvImJ_G0018226.1 mouse_genomes_project 11 48446675 48447611 + MGP_129S1SvImJ_P0028793 Olfr1390 protein_coding protein_coding MGP_129S1SvImJ_T0017201.1 MGP_129S1SvImJ_G0015159.1 mouse_genomes_project 11 20789543 20797538 + Gm12059 processed_transcript processed_transcript MGP_129S1SvImJ_T0033401.1 MGP_129S1SvImJ_G0019377.1 mouse_genomes_project 11 119273529 119283767 - Fdxr protein_coding processed_transcript MGP_129S1SvImJ_T0033402.1 MGP_129S1SvImJ_G0019377.1 mouse_genomes_project 11 119273529 119283903 - MGP_129S1SvImJ_P0033402 Fdxr protein_coding protein_coding MGP_129S1SvImJ_T0033403.1 MGP_129S1SvImJ_G0019377.1 mouse_genomes_project 11 119273853 119274520 - Fdxr protein_coding processed_transcript MGP_129S1SvImJ_T0033404.1 MGP_129S1SvImJ_G0019377.1 mouse_genomes_project 11 119278679 119283577 - Fdxr protein_coding processed_transcript MGP_129S1SvImJ_T0017245.1 MGP_129S1SvImJ_G0015185.1 mouse_genomes_project 11 76208614 76213752 + Mir22hg processed_transcript processed_transcript MGP_129S1SvImJ_T0017246.1 MGP_129S1SvImJ_G0015185.1 mouse_genomes_project 11 76208719 76211105 + Mir22hg processed_transcript processed_transcript MGP_129S1SvImJ_T0012499.1 MGP_129S1SvImJ_G0010588.1 mouse_genomes_project 11 10308983 10309701 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0030654.1 MGP_129S1SvImJ_G0018700.1 mouse_genomes_project 11 75566422 75612803 - MGP_129S1SvImJ_P0030654 Sgsm2 protein_coding protein_coding MGP_129S1SvImJ_T0030655.1 MGP_129S1SvImJ_G0018700.1 mouse_genomes_project 11 75566427 75612803 - MGP_129S1SvImJ_P0030655 Sgsm2 protein_coding protein_coding MGP_129S1SvImJ_T0030656.1 MGP_129S1SvImJ_G0018700.1 mouse_genomes_project 11 75573674 75577649 - Sgsm2 protein_coding retained_intron MGP_129S1SvImJ_T0030657.1 MGP_129S1SvImJ_G0018700.1 mouse_genomes_project 11 75584518 75586182 - Sgsm2 protein_coding retained_intron MGP_129S1SvImJ_T0030658.1 MGP_129S1SvImJ_G0018700.1 mouse_genomes_project 11 75584528 75585478 - Sgsm2 protein_coding retained_intron MGP_129S1SvImJ_T0030506.1 MGP_129S1SvImJ_G0018643.1 mouse_genomes_project 11 73245213 73338111 + MGP_129S1SvImJ_P0030506 Ube2g1 protein_coding protein_coding MGP_129S1SvImJ_T0030507.1 MGP_129S1SvImJ_G0018643.1 mouse_genomes_project 11 73245213 73338111 + MGP_129S1SvImJ_P0030507 Ube2g1 protein_coding protein_coding MGP_129S1SvImJ_T0030508.1 MGP_129S1SvImJ_G0018643.1 mouse_genomes_project 11 73245249 73331771 + Ube2g1 protein_coding retained_intron MGP_129S1SvImJ_T0100510.1 MGP_129S1SvImJ_G0038577.1 mouse_genomes_project 11 70125693 70126632 - Gm24029 snoRNA snoRNA MGP_129S1SvImJ_T0006224.1 MGP_129S1SvImJ_G0005199.1 mouse_genomes_project 11 29942393 29976554 - D630024D03Rik lincRNA lincRNA MGP_129S1SvImJ_T0006225.1 MGP_129S1SvImJ_G0005199.1 mouse_genomes_project 11 29952968 29976605 - D630024D03Rik lincRNA lincRNA MGP_129S1SvImJ_T0006226.1 MGP_129S1SvImJ_G0005199.1 mouse_genomes_project 11 29970190 29976554 - D630024D03Rik lincRNA lincRNA MGP_129S1SvImJ_T0032549.1 MGP_129S1SvImJ_G0019195.1 mouse_genomes_project 11 104169579 104174575 + MGP_129S1SvImJ_P0032549 Aoc2 protein_coding protein_coding MGP_129S1SvImJ_T0032550.1 MGP_129S1SvImJ_G0019195.1 mouse_genomes_project 11 104169603 104174367 + MGP_129S1SvImJ_P0032550 Aoc2 protein_coding protein_coding MGP_129S1SvImJ_T0031615.1 MGP_129S1SvImJ_G0018931.1 mouse_genomes_project 11 90841555 90861906 + MGP_129S1SvImJ_P0031615 Gm525 protein_coding protein_coding MGP_129S1SvImJ_T0031616.1 MGP_129S1SvImJ_G0018931.1 mouse_genomes_project 11 90842734 90861831 + MGP_129S1SvImJ_P0031616 Gm525 protein_coding protein_coding MGP_129S1SvImJ_T0099254.1 MGP_129S1SvImJ_G0037321.1 mouse_genomes_project 11 73539983 73540145 + Gm26121 snRNA snRNA MGP_129S1SvImJ_T0030692.1 MGP_129S1SvImJ_G0018708.1 mouse_genomes_project 11 76041575 76093340 - MGP_129S1SvImJ_P0030692 Rpa1 protein_coding protein_coding MGP_129S1SvImJ_T0030693.1 MGP_129S1SvImJ_G0018708.1 mouse_genomes_project 11 76043759 76093326 - MGP_129S1SvImJ_P0030693 Rpa1 protein_coding protein_coding MGP_129S1SvImJ_T0030694.1 MGP_129S1SvImJ_G0018708.1 mouse_genomes_project 11 76044716 76087251 - Rpa1 protein_coding processed_transcript MGP_129S1SvImJ_T0030695.1 MGP_129S1SvImJ_G0018708.1 mouse_genomes_project 11 76061131 76093311 - Rpa1 protein_coding retained_intron MGP_129S1SvImJ_T0030696.1 MGP_129S1SvImJ_G0018708.1 mouse_genomes_project 11 76087040 76093309 - Rpa1 protein_coding processed_transcript MGP_129S1SvImJ_T0031519.1 MGP_129S1SvImJ_G0018907.1 mouse_genomes_project 11 89219874 89243996 + MGP_129S1SvImJ_P0031519 Mtmr4 protein_coding protein_coding MGP_129S1SvImJ_T0031520.1 MGP_129S1SvImJ_G0018907.1 mouse_genomes_project 11 89219931 89243996 + MGP_129S1SvImJ_P0031520 Mtmr4 protein_coding protein_coding MGP_129S1SvImJ_T0031521.1 MGP_129S1SvImJ_G0018907.1 mouse_genomes_project 11 89219938 89226646 + MGP_129S1SvImJ_P0031521 Mtmr4 protein_coding protein_coding MGP_129S1SvImJ_T0031522.1 MGP_129S1SvImJ_G0018907.1 mouse_genomes_project 11 89220176 89225432 + MGP_129S1SvImJ_P0031522 Mtmr4 protein_coding protein_coding MGP_129S1SvImJ_T0031523.1 MGP_129S1SvImJ_G0018907.1 mouse_genomes_project 11 89220609 89242866 + MGP_129S1SvImJ_P0031523 Mtmr4 protein_coding protein_coding MGP_129S1SvImJ_T0031524.1 MGP_129S1SvImJ_G0018907.1 mouse_genomes_project 11 89223362 89228778 + MGP_129S1SvImJ_P0031524 Mtmr4 protein_coding protein_coding MGP_129S1SvImJ_T0006239.1 MGP_129S1SvImJ_G0005212.1 mouse_genomes_project 11 41848359 41858447 - Gm12145 lincRNA lincRNA MGP_129S1SvImJ_T0033414.1 MGP_129S1SvImJ_G0019382.1 mouse_genomes_project 11 119366583 119387062 - MGP_129S1SvImJ_P0033414 Hid1 protein_coding protein_coding MGP_129S1SvImJ_T0033415.1 MGP_129S1SvImJ_G0019382.1 mouse_genomes_project 11 119366583 119387099 - MGP_129S1SvImJ_P0033415 Hid1 protein_coding protein_coding MGP_129S1SvImJ_T0033416.1 MGP_129S1SvImJ_G0019382.1 mouse_genomes_project 11 119367885 119369880 - Hid1 protein_coding processed_transcript MGP_129S1SvImJ_T0033417.1 MGP_129S1SvImJ_G0019382.1 mouse_genomes_project 11 119372988 119374287 - Hid1 protein_coding processed_transcript MGP_129S1SvImJ_T0033418.1 MGP_129S1SvImJ_G0019382.1 mouse_genomes_project 11 119374272 119387010 - MGP_129S1SvImJ_P0033418 Hid1 protein_coding protein_coding MGP_129S1SvImJ_T0033419.1 MGP_129S1SvImJ_G0019382.1 mouse_genomes_project 11 119375606 119379662 - Hid1 protein_coding processed_transcript MGP_129S1SvImJ_T0033420.1 MGP_129S1SvImJ_G0019382.1 mouse_genomes_project 11 119375701 119386952 - Hid1 protein_coding processed_transcript MGP_129S1SvImJ_T0033421.1 MGP_129S1SvImJ_G0019382.1 mouse_genomes_project 11 119378017 119378658 - Hid1 protein_coding processed_transcript MGP_129S1SvImJ_T0033167.1 MGP_129S1SvImJ_G0019322.1 mouse_genomes_project 11 111123796 111137072 - MGP_129S1SvImJ_P0033167 Cacng1 protein_coding protein_coding MGP_129S1SvImJ_T0031259.1 MGP_129S1SvImJ_G0018843.1 mouse_genomes_project 11 84594057 84606106 - MGP_129S1SvImJ_P0031259 Slfn14 protein_coding protein_coding MGP_129S1SvImJ_T0030709.1 MGP_129S1SvImJ_G0018711.1 mouse_genomes_project 11 76176559 76184500 - MGP_129S1SvImJ_P0030709 Serpinf2 protein_coding protein_coding MGP_129S1SvImJ_T0030710.1 MGP_129S1SvImJ_G0018711.1 mouse_genomes_project 11 76176563 76185101 - MGP_129S1SvImJ_P0030710 Serpinf2 protein_coding protein_coding MGP_129S1SvImJ_T0030711.1 MGP_129S1SvImJ_G0018711.1 mouse_genomes_project 11 76180749 76185191 - MGP_129S1SvImJ_P0030711 Serpinf2 protein_coding protein_coding MGP_129S1SvImJ_T0030712.1 MGP_129S1SvImJ_G0018711.1 mouse_genomes_project 11 76181268 76185178 - MGP_129S1SvImJ_P0030712 Serpinf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0102158.1 MGP_129S1SvImJ_G0039993.1 mouse_genomes_project 11 102379016 102379139 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0012521.1 MGP_129S1SvImJ_G0010610.1 mouse_genomes_project 11 17195631 17196276 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006392.1 MGP_129S1SvImJ_G0005327.1 mouse_genomes_project 11 123425552 123429845 + Gm26508 lincRNA lincRNA MGP_129S1SvImJ_T0032398.1 MGP_129S1SvImJ_G0019163.1 mouse_genomes_project 11 103394249 103419633 - MGP_129S1SvImJ_P0032398 Zfp385c protein_coding protein_coding MGP_129S1SvImJ_T0032399.1 MGP_129S1SvImJ_G0019163.1 mouse_genomes_project 11 103396667 103420624 - Zfp385c protein_coding processed_transcript MGP_129S1SvImJ_T0032400.1 MGP_129S1SvImJ_G0019163.1 mouse_genomes_project 11 103397430 103428709 - MGP_129S1SvImJ_P0032400 Zfp385c protein_coding protein_coding MGP_129S1SvImJ_T0032401.1 MGP_129S1SvImJ_G0019163.1 mouse_genomes_project 11 103405226 103457979 - MGP_129S1SvImJ_P0032401 Zfp385c protein_coding protein_coding MGP_129S1SvImJ_T0006318.1 MGP_129S1SvImJ_G0005274.1 mouse_genomes_project 11 88650232 88650934 - Gm11479 lincRNA lincRNA MGP_129S1SvImJ_T0009738.1 MGP_129S1SvImJ_G0007854.1 mouse_genomes_project 11 86351881 86351948 + Gm23564 miRNA miRNA MGP_129S1SvImJ_T0100489.1 MGP_129S1SvImJ_G0038556.1 mouse_genomes_project 11 24974498 24974617 - Gm24850 snoRNA snoRNA MGP_129S1SvImJ_T0099223.1 MGP_129S1SvImJ_G0037290.1 mouse_genomes_project 11 12763593 12763700 + Gm24707 snRNA snRNA MGP_129S1SvImJ_T0029229.1 MGP_129S1SvImJ_G0018343.1 mouse_genomes_project 11 57791669 57842640 - MGP_129S1SvImJ_P0029229 Gemin5 protein_coding protein_coding MGP_129S1SvImJ_T0029230.1 MGP_129S1SvImJ_G0018343.1 mouse_genomes_project 11 57792957 57842640 - MGP_129S1SvImJ_P0029230 Gemin5 protein_coding protein_coding MGP_129S1SvImJ_T0029231.1 MGP_129S1SvImJ_G0018343.1 mouse_genomes_project 11 57792957 57842640 - MGP_129S1SvImJ_P0029231 Gemin5 protein_coding protein_coding MGP_129S1SvImJ_T0029232.1 MGP_129S1SvImJ_G0018343.1 mouse_genomes_project 11 57809607 57812282 - Gemin5 protein_coding processed_transcript MGP_129S1SvImJ_T0029233.1 MGP_129S1SvImJ_G0018343.1 mouse_genomes_project 11 57827617 57834874 - MGP_129S1SvImJ_P0029233 Gemin5 protein_coding protein_coding MGP_129S1SvImJ_T0012595.1 MGP_129S1SvImJ_G0010684.1 mouse_genomes_project 11 44921342 44921684 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009736.1 MGP_129S1SvImJ_G0007852.1 mouse_genomes_project 11 84310682 84310745 - Mir7679 miRNA miRNA MGP_129S1SvImJ_T0006223.1 MGP_129S1SvImJ_G0005198.1 mouse_genomes_project 11 27629232 27663495 - Gm12092 lincRNA lincRNA MGP_129S1SvImJ_T0028281.1 MGP_129S1SvImJ_G0018090.1 mouse_genomes_project 11 21415952 21437285 - MGP_129S1SvImJ_P0028281 Pex13 protein_coding protein_coding MGP_129S1SvImJ_T0028282.1 MGP_129S1SvImJ_G0018090.1 mouse_genomes_project 11 21420437 21437178 - MGP_129S1SvImJ_P0028282 Pex13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028283.1 MGP_129S1SvImJ_G0018090.1 mouse_genomes_project 11 21427184 21437168 - Pex13 protein_coding processed_transcript MGP_129S1SvImJ_T0028284.1 MGP_129S1SvImJ_G0018090.1 mouse_genomes_project 11 21427437 21436999 - Pex13 protein_coding processed_transcript MGP_129S1SvImJ_T0032572.1 MGP_129S1SvImJ_G0019203.1 mouse_genomes_project 11 104315935 104326725 + MGP_129S1SvImJ_P0032572 Ifi35 protein_coding protein_coding MGP_129S1SvImJ_T0032573.1 MGP_129S1SvImJ_G0019203.1 mouse_genomes_project 11 104315972 104326152 + Ifi35 protein_coding retained_intron MGP_129S1SvImJ_T0032574.1 MGP_129S1SvImJ_G0019203.1 mouse_genomes_project 11 104316098 104326491 + MGP_129S1SvImJ_P0032574 Ifi35 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0100529.1 MGP_129S1SvImJ_G0038596.1 mouse_genomes_project 11 94863770 94863912 + Gm25113 snoRNA snoRNA MGP_129S1SvImJ_T0100535.1 MGP_129S1SvImJ_G0038602.1 mouse_genomes_project 11 101649716 101649838 - Gm23451 snoRNA snoRNA MGP_129S1SvImJ_T0029361.1 MGP_129S1SvImJ_G0018399.1 mouse_genomes_project 11 59298902 59310179 - MGP_129S1SvImJ_P0029361 Zfp867 protein_coding protein_coding MGP_129S1SvImJ_T0028498.1 MGP_129S1SvImJ_G0018139.1 mouse_genomes_project 11 31072202 31079599 - MGP_129S1SvImJ_P0028498 Smim23 protein_coding protein_coding MGP_129S1SvImJ_T0028499.1 MGP_129S1SvImJ_G0018139.1 mouse_genomes_project 11 31074046 31079642 - MGP_129S1SvImJ_P0028499 Smim23 protein_coding protein_coding MGP_129S1SvImJ_T0028686.1 MGP_129S1SvImJ_G0018192.1 mouse_genomes_project 11 45238980 45306493 - MGP_129S1SvImJ_P0028686 Itk protein_coding protein_coding MGP_129S1SvImJ_T0028687.1 MGP_129S1SvImJ_G0018192.1 mouse_genomes_project 11 45238980 45306515 - MGP_129S1SvImJ_P0028687 Itk protein_coding protein_coding MGP_129S1SvImJ_T0028688.1 MGP_129S1SvImJ_G0018192.1 mouse_genomes_project 11 45259415 45306457 - MGP_129S1SvImJ_P0028688 Itk protein_coding protein_coding MGP_129S1SvImJ_T0028689.1 MGP_129S1SvImJ_G0018192.1 mouse_genomes_project 11 45279208 45306461 - Itk protein_coding retained_intron MGP_129S1SvImJ_T0009789.1 MGP_129S1SvImJ_G0007905.1 mouse_genomes_project 11 125104880 125104934 - Mir6936 miRNA miRNA MGP_129S1SvImJ_T0029046.1 MGP_129S1SvImJ_G0018298.1 mouse_genomes_project 11 52908002 52926844 + MGP_129S1SvImJ_P0029046 Sept8 protein_coding protein_coding MGP_129S1SvImJ_T0029047.1 MGP_129S1SvImJ_G0018298.1 mouse_genomes_project 11 52908491 52935559 + MGP_129S1SvImJ_P0029047 Sept8 protein_coding protein_coding MGP_129S1SvImJ_T0029048.1 MGP_129S1SvImJ_G0018298.1 mouse_genomes_project 11 52908515 52941029 + MGP_129S1SvImJ_P0029048 Sept8 protein_coding protein_coding MGP_129S1SvImJ_T0029049.1 MGP_129S1SvImJ_G0018298.1 mouse_genomes_project 11 52908545 52935560 + MGP_129S1SvImJ_P0029049 Sept8 protein_coding protein_coding MGP_129S1SvImJ_T0029050.1 MGP_129S1SvImJ_G0018298.1 mouse_genomes_project 11 52908653 52933362 + MGP_129S1SvImJ_P0029050 Sept8 protein_coding protein_coding MGP_129S1SvImJ_T0029051.1 MGP_129S1SvImJ_G0018298.1 mouse_genomes_project 11 52908672 52933311 + MGP_129S1SvImJ_P0029051 Sept8 protein_coding protein_coding MGP_129S1SvImJ_T0029052.1 MGP_129S1SvImJ_G0018298.1 mouse_genomes_project 11 52920788 52929507 + Sept8 protein_coding processed_transcript MGP_129S1SvImJ_T0012467.1 MGP_129S1SvImJ_G0010556.1 mouse_genomes_project 11 35770 41620 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100534.1 MGP_129S1SvImJ_G0038601.1 mouse_genomes_project 11 101631318 101631433 + Gm26394 snoRNA snoRNA MGP_129S1SvImJ_T0006207.1 MGP_129S1SvImJ_G0005186.1 mouse_genomes_project 11 21866607 21867416 + Gm12063 lincRNA lincRNA MGP_129S1SvImJ_T0029346.1 MGP_129S1SvImJ_G0018395.1 mouse_genomes_project 11 59134222 59162435 + MGP_129S1SvImJ_P0029346 Wnt9a protein_coding protein_coding MGP_129S1SvImJ_T0029347.1 MGP_129S1SvImJ_G0018395.1 mouse_genomes_project 11 59134224 59162435 + MGP_129S1SvImJ_P0029347 Wnt9a protein_coding protein_coding MGP_129S1SvImJ_T0030053.1 MGP_129S1SvImJ_G0018550.1 mouse_genomes_project 11 70145261 70155097 - MGP_129S1SvImJ_P0030053 Tnfsf12 protein_coding protein_coding MGP_129S1SvImJ_T0030054.1 MGP_129S1SvImJ_G0018550.1 mouse_genomes_project 11 70146351 70154769 - MGP_129S1SvImJ_P0030054 Tnfsf12 protein_coding protein_coding MGP_129S1SvImJ_T0009751.1 MGP_129S1SvImJ_G0007867.1 mouse_genomes_project 11 99532277 99532333 - Mir7235 miRNA miRNA MGP_129S1SvImJ_T0029372.1 MGP_129S1SvImJ_G0018404.1 mouse_genomes_project 11 59509666 59577288 + protein_coding processed_transcript MGP_129S1SvImJ_T0029373.1 MGP_129S1SvImJ_G0018404.1 mouse_genomes_project 11 59510856 59631152 + MGP_129S1SvImJ_P0029373 protein_coding protein_coding MGP_129S1SvImJ_T0029374.1 MGP_129S1SvImJ_G0018404.1 mouse_genomes_project 11 59510868 59626515 + MGP_129S1SvImJ_P0029374 protein_coding protein_coding MGP_129S1SvImJ_T0029375.1 MGP_129S1SvImJ_G0018404.1 mouse_genomes_project 11 59510868 59631146 + MGP_129S1SvImJ_P0029375 protein_coding protein_coding MGP_129S1SvImJ_T0029376.1 MGP_129S1SvImJ_G0018404.1 mouse_genomes_project 11 59510868 59626515 + MGP_129S1SvImJ_P0029376 protein_coding protein_coding MGP_129S1SvImJ_T0029377.1 MGP_129S1SvImJ_G0018404.1 mouse_genomes_project 11 59577283 59626894 + MGP_129S1SvImJ_P0029377 protein_coding protein_coding MGP_129S1SvImJ_T0029378.1 MGP_129S1SvImJ_G0018404.1 mouse_genomes_project 11 59581152 59626515 + MGP_129S1SvImJ_P0029378 protein_coding protein_coding MGP_129S1SvImJ_T0029379.1 MGP_129S1SvImJ_G0018404.1 mouse_genomes_project 11 59590360 59599036 + protein_coding processed_transcript MGP_129S1SvImJ_T0029380.1 MGP_129S1SvImJ_G0018404.1 mouse_genomes_project 11 59610218 59626515 + MGP_129S1SvImJ_P0029380 protein_coding protein_coding MGP_129S1SvImJ_T0033914.1 MGP_129S1SvImJ_G0019474.1 mouse_genomes_project 11 123425552 123436252 - MGP_129S1SvImJ_P0033914 Cbx4 protein_coding protein_coding MGP_129S1SvImJ_T0033915.1 MGP_129S1SvImJ_G0019474.1 mouse_genomes_project 11 123429352 123436252 - Cbx4 protein_coding processed_transcript MGP_129S1SvImJ_T0028428.1 MGP_129S1SvImJ_G0018121.1 mouse_genomes_project 11 29490724 29503496 - MGP_129S1SvImJ_P0028428 Stc2 protein_coding protein_coding MGP_129S1SvImJ_T0028429.1 MGP_129S1SvImJ_G0018121.1 mouse_genomes_project 11 29491403 29502525 - Stc2 protein_coding processed_transcript MGP_129S1SvImJ_T0028430.1 MGP_129S1SvImJ_G0018121.1 mouse_genomes_project 11 29498858 29501588 - Stc2 protein_coding processed_transcript MGP_129S1SvImJ_T0028431.1 MGP_129S1SvImJ_G0018121.1 mouse_genomes_project 11 29501420 29503469 - Stc2 protein_coding processed_transcript MGP_129S1SvImJ_T0028432.1 MGP_129S1SvImJ_G0018121.1 mouse_genomes_project 11 29501424 29502478 - Stc2 protein_coding processed_transcript MGP_129S1SvImJ_T0006210.1 MGP_129S1SvImJ_G0005189.1 mouse_genomes_project 11 22231336 22531256 + lincRNA lincRNA MGP_129S1SvImJ_T0012681.1 MGP_129S1SvImJ_G0010770.1 mouse_genomes_project 11 74085450 74085837 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0027712.1 MGP_129S1SvImJ_G0017960.1 mouse_genomes_project 11 388904 391569 + Selm protein_coding processed_transcript MGP_129S1SvImJ_T0027713.1 MGP_129S1SvImJ_G0017960.1 mouse_genomes_project 11 388922 391351 + Selm protein_coding processed_transcript MGP_129S1SvImJ_T0027714.1 MGP_129S1SvImJ_G0017960.1 mouse_genomes_project 11 389087 391572 + MGP_129S1SvImJ_P0027714 Selm protein_coding protein_coding MGP_129S1SvImJ_T0027741.1 MGP_129S1SvImJ_G0017967.1 mouse_genomes_project 11 829027 844999 - MGP_129S1SvImJ_P0027741 Tcn2 protein_coding protein_coding MGP_129S1SvImJ_T0027742.1 MGP_129S1SvImJ_G0017967.1 mouse_genomes_project 11 829027 845166 - MGP_129S1SvImJ_P0027742 Tcn2 protein_coding protein_coding MGP_129S1SvImJ_T0027743.1 MGP_129S1SvImJ_G0017967.1 mouse_genomes_project 11 829027 845365 - MGP_129S1SvImJ_P0027743 Tcn2 protein_coding protein_coding MGP_129S1SvImJ_T0027744.1 MGP_129S1SvImJ_G0017967.1 mouse_genomes_project 11 829027 845284 - MGP_129S1SvImJ_P0027744 Tcn2 protein_coding protein_coding MGP_129S1SvImJ_T0027745.1 MGP_129S1SvImJ_G0017967.1 mouse_genomes_project 11 829027 845250 - MGP_129S1SvImJ_P0027745 Tcn2 protein_coding protein_coding MGP_129S1SvImJ_T0027746.1 MGP_129S1SvImJ_G0017967.1 mouse_genomes_project 11 829027 845201 - MGP_129S1SvImJ_P0027746 Tcn2 protein_coding protein_coding MGP_129S1SvImJ_T0027747.1 MGP_129S1SvImJ_G0017967.1 mouse_genomes_project 11 829027 845014 - MGP_129S1SvImJ_P0027747 Tcn2 protein_coding protein_coding MGP_129S1SvImJ_T0009675.1 MGP_129S1SvImJ_G0007791.1 mouse_genomes_project 11 26749206 26749314 + Mir217 miRNA miRNA MGP_129S1SvImJ_T0031422.1 MGP_129S1SvImJ_G0018884.1 mouse_genomes_project 11 87377970 87382712 - MGP_129S1SvImJ_P0031422 Gm11444 protein_coding protein_coding MGP_129S1SvImJ_T0031423.1 MGP_129S1SvImJ_G0018885.1 mouse_genomes_project 11 87419266 87452152 + MGP_129S1SvImJ_P0031423 Tbx4 protein_coding protein_coding MGP_129S1SvImJ_T0031424.1 MGP_129S1SvImJ_G0018885.1 mouse_genomes_project 11 87422906 87452154 + MGP_129S1SvImJ_P0031424 Tbx4 protein_coding protein_coding MGP_129S1SvImJ_T0031425.1 MGP_129S1SvImJ_G0018885.1 mouse_genomes_project 11 87428200 87450798 + MGP_129S1SvImJ_P0031425 Tbx4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0030262.1 MGP_129S1SvImJ_G0018594.1 mouse_genomes_project 11 70965914 70969277 + Arrb2 protein_coding retained_intron MGP_129S1SvImJ_T0030263.1 MGP_129S1SvImJ_G0018594.1 mouse_genomes_project 11 70965916 70973955 + MGP_129S1SvImJ_P0030263 Arrb2 protein_coding protein_coding MGP_129S1SvImJ_T0030264.1 MGP_129S1SvImJ_G0018594.1 mouse_genomes_project 11 70965916 70973955 + MGP_129S1SvImJ_P0030264 Arrb2 protein_coding protein_coding MGP_129S1SvImJ_T0030265.1 MGP_129S1SvImJ_G0018594.1 mouse_genomes_project 11 70965924 70974109 + MGP_129S1SvImJ_P0030265 Arrb2 protein_coding protein_coding MGP_129S1SvImJ_T0030266.1 MGP_129S1SvImJ_G0018594.1 mouse_genomes_project 11 70965956 70970886 + MGP_129S1SvImJ_P0030266 Arrb2 protein_coding protein_coding MGP_129S1SvImJ_T0030267.1 MGP_129S1SvImJ_G0018594.1 mouse_genomes_project 11 70965961 70972028 + MGP_129S1SvImJ_P0030267 Arrb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030268.1 MGP_129S1SvImJ_G0018594.1 mouse_genomes_project 11 70966010 70974084 + MGP_129S1SvImJ_P0030268 Arrb2 protein_coding protein_coding MGP_129S1SvImJ_T0030269.1 MGP_129S1SvImJ_G0018594.1 mouse_genomes_project 11 70969979 70973514 + Arrb2 protein_coding retained_intron MGP_129S1SvImJ_T0030270.1 MGP_129S1SvImJ_G0018594.1 mouse_genomes_project 11 70970183 70972003 + Arrb2 protein_coding retained_intron MGP_129S1SvImJ_T0030271.1 MGP_129S1SvImJ_G0018594.1 mouse_genomes_project 11 70970572 70972834 + Arrb2 protein_coding retained_intron MGP_129S1SvImJ_T0030272.1 MGP_129S1SvImJ_G0018594.1 mouse_genomes_project 11 70971862 70973509 + Arrb2 protein_coding retained_intron MGP_129S1SvImJ_T0003220.1 MGP_129S1SvImJ_G0002988.1 mouse_genomes_project 11 63012030 63014513 - Tvp23bos antisense antisense MGP_129S1SvImJ_T0028501.1 MGP_129S1SvImJ_G0018141.1 mouse_genomes_project 11 31430868 31441788 - MGP_129S1SvImJ_P0028501 Npm1 protein_coding protein_coding MGP_129S1SvImJ_T0028502.1 MGP_129S1SvImJ_G0018141.1 mouse_genomes_project 11 31431089 31441654 - MGP_129S1SvImJ_P0028502 Npm1 protein_coding protein_coding MGP_129S1SvImJ_T0028503.1 MGP_129S1SvImJ_G0018141.1 mouse_genomes_project 11 31431092 31433047 - Npm1 protein_coding processed_transcript MGP_129S1SvImJ_T0028504.1 MGP_129S1SvImJ_G0018141.1 mouse_genomes_project 11 31433508 31441659 - MGP_129S1SvImJ_P0028504 Npm1 protein_coding protein_coding MGP_129S1SvImJ_T0028505.1 MGP_129S1SvImJ_G0018141.1 mouse_genomes_project 11 31433909 31441658 - MGP_129S1SvImJ_P0028505 Npm1 protein_coding protein_coding MGP_129S1SvImJ_T0028506.1 MGP_129S1SvImJ_G0018141.1 mouse_genomes_project 11 31434607 31435859 - Npm1 protein_coding processed_transcript MGP_129S1SvImJ_T0028644.1 MGP_129S1SvImJ_G0018180.1 mouse_genomes_project 11 43233901 43247814 + MGP_129S1SvImJ_P0028644 Il12b protein_coding protein_coding MGP_129S1SvImJ_T0028645.1 MGP_129S1SvImJ_G0018180.1 mouse_genomes_project 11 43233901 43247838 + MGP_129S1SvImJ_P0028645 Il12b protein_coding protein_coding MGP_129S1SvImJ_T0003190.1 MGP_129S1SvImJ_G0002963.1 mouse_genomes_project 11 54705762 54711586 - Slc36a1os antisense antisense MGP_129S1SvImJ_T0003191.1 MGP_129S1SvImJ_G0002963.1 mouse_genomes_project 11 54706996 54711768 - Slc36a1os antisense antisense MGP_129S1SvImJ_T0027783.1 MGP_129S1SvImJ_G0017976.1 mouse_genomes_project 11 1069074 1075617 - Ccdc157 protein_coding processed_transcript MGP_129S1SvImJ_T0027784.1 MGP_129S1SvImJ_G0017976.1 mouse_genomes_project 11 1069074 1090304 - MGP_129S1SvImJ_P0027784 Ccdc157 protein_coding protein_coding MGP_129S1SvImJ_T0027785.1 MGP_129S1SvImJ_G0017976.1 mouse_genomes_project 11 1069074 1090306 - MGP_129S1SvImJ_P0027785 Ccdc157 protein_coding protein_coding MGP_129S1SvImJ_T0027786.1 MGP_129S1SvImJ_G0017976.1 mouse_genomes_project 11 1076765 1090231 - Ccdc157 protein_coding processed_transcript MGP_129S1SvImJ_T0027787.1 MGP_129S1SvImJ_G0017976.1 mouse_genomes_project 11 1077959 1090231 - Ccdc157 protein_coding processed_transcript MGP_129S1SvImJ_T0027788.1 MGP_129S1SvImJ_G0017976.1 mouse_genomes_project 11 1079442 1090265 - Ccdc157 protein_coding processed_transcript MGP_129S1SvImJ_T0033805.1 MGP_129S1SvImJ_G0019449.1 mouse_genomes_project 11 122046790 122061582 - MGP_129S1SvImJ_P0033805 Tmc6 protein_coding protein_coding MGP_129S1SvImJ_T0033806.1 MGP_129S1SvImJ_G0019449.1 mouse_genomes_project 11 122046790 122060591 - MGP_129S1SvImJ_P0033806 Tmc6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033807.1 MGP_129S1SvImJ_G0019449.1 mouse_genomes_project 11 122046862 122049876 - Tmc6 protein_coding retained_intron MGP_129S1SvImJ_T0033808.1 MGP_129S1SvImJ_G0019449.1 mouse_genomes_project 11 122050876 122054020 - MGP_129S1SvImJ_P0033808 Tmc6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033809.1 MGP_129S1SvImJ_G0019449.1 mouse_genomes_project 11 122056325 122061564 - MGP_129S1SvImJ_P0033809 Tmc6 protein_coding protein_coding MGP_129S1SvImJ_T0033810.1 MGP_129S1SvImJ_G0019449.1 mouse_genomes_project 11 122056685 122060593 - MGP_129S1SvImJ_P0033810 Tmc6 protein_coding protein_coding MGP_129S1SvImJ_T0033811.1 MGP_129S1SvImJ_G0019449.1 mouse_genomes_project 11 122059684 122061887 - MGP_129S1SvImJ_P0033811 Tmc6 protein_coding protein_coding MGP_129S1SvImJ_T0033812.1 MGP_129S1SvImJ_G0019449.1 mouse_genomes_project 11 122059880 122063141 - MGP_129S1SvImJ_P0033812 Tmc6 protein_coding protein_coding MGP_129S1SvImJ_T0033813.1 MGP_129S1SvImJ_G0019449.1 mouse_genomes_project 11 122060134 122061601 - MGP_129S1SvImJ_P0033813 Tmc6 protein_coding protein_coding MGP_129S1SvImJ_T0031776.1 MGP_129S1SvImJ_G0018968.1 mouse_genomes_project 11 96865993 96867203 + MGP_129S1SvImJ_P0031776 Cdc34b protein_coding protein_coding MGP_129S1SvImJ_T0031777.1 MGP_129S1SvImJ_G0018968.1 mouse_genomes_project 11 96865993 96867633 + MGP_129S1SvImJ_P0031777 Cdc34b protein_coding protein_coding MGP_129S1SvImJ_T0102146.1 MGP_129S1SvImJ_G0039981.1 mouse_genomes_project 11 76946189 76946651 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0027905.1 MGP_129S1SvImJ_G0018001.1 mouse_genomes_project 11 2581605 2589210 + MGP_129S1SvImJ_P0027905 Xbp1 protein_coding protein_coding MGP_129S1SvImJ_T0027906.1 MGP_129S1SvImJ_G0018001.1 mouse_genomes_project 11 2581951 2587319 + Xbp1 protein_coding retained_intron MGP_129S1SvImJ_T0027907.1 MGP_129S1SvImJ_G0018001.1 mouse_genomes_project 11 2582608 2588236 + MGP_129S1SvImJ_P0027907 Xbp1 protein_coding protein_coding MGP_129S1SvImJ_T0027908.1 MGP_129S1SvImJ_G0018001.1 mouse_genomes_project 11 2582868 2588398 + MGP_129S1SvImJ_P0027908 Xbp1 protein_coding protein_coding MGP_129S1SvImJ_T0028890.1 MGP_129S1SvImJ_G0018253.1 mouse_genomes_project 11 50024887 50033846 - MGP_129S1SvImJ_P0028890 Zfp879 protein_coding protein_coding MGP_129S1SvImJ_T0102165.1 MGP_129S1SvImJ_G0040000.1 mouse_genomes_project 11 125253251 125255327 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0031154.1 MGP_129S1SvImJ_G0018810.1 mouse_genomes_project 11 81455986 81512158 + MGP_129S1SvImJ_P0031154 Rhbdl3 protein_coding protein_coding MGP_129S1SvImJ_T0031155.1 MGP_129S1SvImJ_G0018810.1 mouse_genomes_project 11 81474768 81479237 + Rhbdl3 protein_coding retained_intron MGP_129S1SvImJ_T0031156.1 MGP_129S1SvImJ_G0018810.1 mouse_genomes_project 11 81502584 81509887 + Rhbdl3 protein_coding retained_intron MGP_129S1SvImJ_T0031809.1 MGP_129S1SvImJ_G0018978.1 mouse_genomes_project 11 97330263 97336080 - MGP_129S1SvImJ_P0031809 Dlx4 protein_coding protein_coding MGP_129S1SvImJ_T0031810.1 MGP_129S1SvImJ_G0018978.1 mouse_genomes_project 11 97333443 97335618 - Dlx4 protein_coding processed_transcript MGP_129S1SvImJ_T0003297.1 MGP_129S1SvImJ_G0003047.1 mouse_genomes_project 11 99114079 99115547 + Gm11537 antisense antisense MGP_129S1SvImJ_T0102148.1 MGP_129S1SvImJ_G0039983.1 mouse_genomes_project 11 85054793 85055637 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0100501.1 MGP_129S1SvImJ_G0038568.1 mouse_genomes_project 11 55840660 55840726 - Gm24253 snoRNA snoRNA MGP_129S1SvImJ_T0031440.1 MGP_129S1SvImJ_G0018888.1 mouse_genomes_project 11 87816156 87908342 - MGP_129S1SvImJ_P0031440 Med13 protein_coding protein_coding MGP_129S1SvImJ_T0031441.1 MGP_129S1SvImJ_G0018888.1 mouse_genomes_project 11 87821938 87828023 - Med13 protein_coding processed_transcript MGP_129S1SvImJ_T0031442.1 MGP_129S1SvImJ_G0018888.1 mouse_genomes_project 11 87824765 87828415 - Med13 protein_coding retained_intron MGP_129S1SvImJ_T0031443.1 MGP_129S1SvImJ_G0018888.1 mouse_genomes_project 11 87881743 87882921 - Med13 protein_coding retained_intron MGP_129S1SvImJ_T0028827.1 MGP_129S1SvImJ_G0018240.1 mouse_genomes_project 11 49174778 49260955 + MGP_129S1SvImJ_P0028827 Rnf130 protein_coding protein_coding MGP_129S1SvImJ_T0028828.1 MGP_129S1SvImJ_G0018240.1 mouse_genomes_project 11 49177375 49261144 + MGP_129S1SvImJ_P0028828 Rnf130 protein_coding protein_coding MGP_129S1SvImJ_T0028829.1 MGP_129S1SvImJ_G0018240.1 mouse_genomes_project 11 49250065 49261149 + Rnf130 protein_coding processed_transcript MGP_129S1SvImJ_T0030960.1 MGP_129S1SvImJ_G0018762.1 mouse_genomes_project 11 79042056 79051660 - Eral1 protein_coding retained_intron MGP_129S1SvImJ_T0030961.1 MGP_129S1SvImJ_G0018762.1 mouse_genomes_project 11 79042056 79051660 - MGP_129S1SvImJ_P0030961 Eral1 protein_coding protein_coding MGP_129S1SvImJ_T0030962.1 MGP_129S1SvImJ_G0018762.1 mouse_genomes_project 11 79043211 79044652 - Eral1 protein_coding retained_intron MGP_129S1SvImJ_T0031962.1 MGP_129S1SvImJ_G0019018.1 mouse_genomes_project 11 99326812 99351211 - MGP_129S1SvImJ_P0031962 Sp2 protein_coding protein_coding MGP_129S1SvImJ_T0031963.1 MGP_129S1SvImJ_G0019018.1 mouse_genomes_project 11 99326813 99351234 - MGP_129S1SvImJ_P0031963 Sp2 protein_coding protein_coding MGP_129S1SvImJ_T0031964.1 MGP_129S1SvImJ_G0019018.1 mouse_genomes_project 11 99326945 99342140 - MGP_129S1SvImJ_P0031964 Sp2 protein_coding protein_coding MGP_129S1SvImJ_T0031965.1 MGP_129S1SvImJ_G0019018.1 mouse_genomes_project 11 99327691 99356485 - MGP_129S1SvImJ_P0031965 Sp2 protein_coding protein_coding MGP_129S1SvImJ_T0012538.1 MGP_129S1SvImJ_G0010627.1 mouse_genomes_project 11 20059830 20061735 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033911.1 MGP_129S1SvImJ_G0019473.1 mouse_genomes_project 11 123381384 123387610 - MGP_129S1SvImJ_P0033911 Cbx8 protein_coding protein_coding MGP_129S1SvImJ_T0033912.1 MGP_129S1SvImJ_G0019473.1 mouse_genomes_project 11 123385693 123387472 - Cbx8 protein_coding processed_transcript MGP_129S1SvImJ_T0033913.1 MGP_129S1SvImJ_G0019473.1 mouse_genomes_project 11 123385824 123387552 - Cbx8 protein_coding processed_transcript MGP_129S1SvImJ_T0012551.1 MGP_129S1SvImJ_G0010640.1 mouse_genomes_project 11 25410548 25411024 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012623.1 MGP_129S1SvImJ_G0010712.1 mouse_genomes_project 11 53869069 53869367 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031258.1 MGP_129S1SvImJ_G0018842.1 mouse_genomes_project 11 84505168 84533069 + MGP_129S1SvImJ_P0031258 Slfn3 protein_coding protein_coding MGP_129S1SvImJ_T0033686.1 MGP_129S1SvImJ_G0019429.1 mouse_genomes_project 11 120586843 120613710 - Prpsap1 protein_coding processed_transcript MGP_129S1SvImJ_T0033687.1 MGP_129S1SvImJ_G0019429.1 mouse_genomes_project 11 120586843 120613744 - MGP_129S1SvImJ_P0033687 Prpsap1 protein_coding protein_coding MGP_129S1SvImJ_T0033688.1 MGP_129S1SvImJ_G0019429.1 mouse_genomes_project 11 120587297 120594306 - Prpsap1 protein_coding processed_transcript MGP_129S1SvImJ_T0033689.1 MGP_129S1SvImJ_G0019429.1 mouse_genomes_project 11 120587374 120589242 - Prpsap1 protein_coding processed_transcript MGP_129S1SvImJ_T0033690.1 MGP_129S1SvImJ_G0019429.1 mouse_genomes_project 11 120587398 120593725 - Prpsap1 protein_coding processed_transcript MGP_129S1SvImJ_T0033691.1 MGP_129S1SvImJ_G0019429.1 mouse_genomes_project 11 120594045 120617591 - MGP_129S1SvImJ_P0033691 Prpsap1 protein_coding protein_coding MGP_129S1SvImJ_T0033692.1 MGP_129S1SvImJ_G0019429.1 mouse_genomes_project 11 120594277 120613685 - Prpsap1 protein_coding processed_transcript MGP_129S1SvImJ_T0033693.1 MGP_129S1SvImJ_G0019429.1 mouse_genomes_project 11 120594519 120613731 - MGP_129S1SvImJ_P0033693 Prpsap1 protein_coding protein_coding MGP_129S1SvImJ_T0033694.1 MGP_129S1SvImJ_G0019429.1 mouse_genomes_project 11 120608928 120613723 - Prpsap1 protein_coding processed_transcript MGP_129S1SvImJ_T0030625.1 MGP_129S1SvImJ_G0018692.1 mouse_genomes_project 11 75028029 75029078 - MGP_129S1SvImJ_P0030625 Olfr411 protein_coding protein_coding MGP_129S1SvImJ_T0030626.1 MGP_129S1SvImJ_G0018692.1 mouse_genomes_project 11 75028297 75034026 - MGP_129S1SvImJ_P0030626 Olfr411 protein_coding protein_coding MGP_129S1SvImJ_T0012622.1 MGP_129S1SvImJ_G0010711.1 mouse_genomes_project 11 53667516 53667776 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031209.1 MGP_129S1SvImJ_G0018828.1 mouse_genomes_project 11 83986968 84036582 - MGP_129S1SvImJ_P0031209 Cct6b protein_coding protein_coding MGP_129S1SvImJ_T0031210.1 MGP_129S1SvImJ_G0018828.1 mouse_genomes_project 11 83986968 84036597 - MGP_129S1SvImJ_P0031210 Cct6b protein_coding protein_coding MGP_129S1SvImJ_T0009742.1 MGP_129S1SvImJ_G0007858.1 mouse_genomes_project 11 89388855 89388970 - Mir142b miRNA miRNA MGP_129S1SvImJ_T0030074.1 MGP_129S1SvImJ_G0018557.1 mouse_genomes_project 11 70299756 70301656 - MGP_129S1SvImJ_P0030074 4933402P03Rik protein_coding protein_coding MGP_129S1SvImJ_T0003372.1 MGP_129S1SvImJ_G0003107.1 mouse_genomes_project 11 122064267 122065997 - Gm11723 antisense antisense MGP_129S1SvImJ_T0030770.1 MGP_129S1SvImJ_G0018724.1 mouse_genomes_project 11 76609632 76722040 - MGP_129S1SvImJ_P0030770 Rph3al protein_coding protein_coding MGP_129S1SvImJ_T0030771.1 MGP_129S1SvImJ_G0018724.1 mouse_genomes_project 11 76610770 76692792 - MGP_129S1SvImJ_P0030771 Rph3al protein_coding protein_coding MGP_129S1SvImJ_T0030772.1 MGP_129S1SvImJ_G0018724.1 mouse_genomes_project 11 76681451 76709167 - MGP_129S1SvImJ_P0030772 Rph3al protein_coding protein_coding MGP_129S1SvImJ_T0030773.1 MGP_129S1SvImJ_G0018724.1 mouse_genomes_project 11 76682467 76721999 - MGP_129S1SvImJ_P0030773 Rph3al protein_coding protein_coding MGP_129S1SvImJ_T0030774.1 MGP_129S1SvImJ_G0018724.1 mouse_genomes_project 11 76688300 76722731 - MGP_129S1SvImJ_P0030774 Rph3al protein_coding protein_coding MGP_129S1SvImJ_T0009746.1 MGP_129S1SvImJ_G0007862.1 mouse_genomes_project 11 98230296 98230388 - Mir3063 miRNA miRNA MGP_129S1SvImJ_T0028324.1 MGP_129S1SvImJ_G0018099.1 mouse_genomes_project 11 24456042 24456646 + MGP_129S1SvImJ_P0028324 Gm6899 protein_coding protein_coding MGP_129S1SvImJ_T0006307.1 MGP_129S1SvImJ_G0005267.1 mouse_genomes_project 11 83222990 83226354 + Gm11419 lincRNA lincRNA MGP_129S1SvImJ_T0028747.1 MGP_129S1SvImJ_G0018214.1 mouse_genomes_project 11 48100341 48191706 + MGP_129S1SvImJ_P0028747 Olfr56 protein_coding protein_coding MGP_129S1SvImJ_T0028748.1 MGP_129S1SvImJ_G0018214.1 mouse_genomes_project 11 48100341 48191706 + MGP_129S1SvImJ_P0028748 Olfr56 protein_coding protein_coding MGP_129S1SvImJ_T0028749.1 MGP_129S1SvImJ_G0018214.1 mouse_genomes_project 11 48100341 48191706 + MGP_129S1SvImJ_P0028749 Olfr56 protein_coding protein_coding MGP_129S1SvImJ_T0028752.1 MGP_129S1SvImJ_G0018214.1 mouse_genomes_project 11 48141269 48181501 + Olfr56 protein_coding retained_intron MGP_129S1SvImJ_T0028754.1 MGP_129S1SvImJ_G0018214.1 mouse_genomes_project 11 48141287 48191639 + MGP_129S1SvImJ_P0028754 Olfr56 protein_coding protein_coding MGP_129S1SvImJ_T0028757.1 MGP_129S1SvImJ_G0018214.1 mouse_genomes_project 11 48173092 48191638 + MGP_129S1SvImJ_P0028757 Olfr56 protein_coding protein_coding MGP_129S1SvImJ_T0029704.1 MGP_129S1SvImJ_G0018467.1 mouse_genomes_project 11 63154157 63191971 + MGP_129S1SvImJ_P0029704 Tekt3 protein_coding protein_coding MGP_129S1SvImJ_T0027779.1 MGP_129S1SvImJ_G0017975.1 mouse_genomes_project 11 1063153 1069124 + MGP_129S1SvImJ_P0027779 Rnf215 protein_coding protein_coding MGP_129S1SvImJ_T0027780.1 MGP_129S1SvImJ_G0017975.1 mouse_genomes_project 11 1063165 1065320 + MGP_129S1SvImJ_P0027780 Rnf215 protein_coding protein_coding MGP_129S1SvImJ_T0027781.1 MGP_129S1SvImJ_G0017975.1 mouse_genomes_project 11 1063233 1065169 + MGP_129S1SvImJ_P0027781 Rnf215 protein_coding protein_coding MGP_129S1SvImJ_T0027782.1 MGP_129S1SvImJ_G0017975.1 mouse_genomes_project 11 1063453 1065107 + Rnf215 protein_coding processed_transcript MGP_129S1SvImJ_T0012560.1 MGP_129S1SvImJ_G0010649.1 mouse_genomes_project 11 27882298 27882770 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029053.1 MGP_129S1SvImJ_G0018299.1 mouse_genomes_project 11 52960390 52995590 + MGP_129S1SvImJ_P0029053 Kif3a protein_coding protein_coding MGP_129S1SvImJ_T0029054.1 MGP_129S1SvImJ_G0018299.1 mouse_genomes_project 11 52960390 52996448 + MGP_129S1SvImJ_P0029054 Kif3a protein_coding protein_coding MGP_129S1SvImJ_T0029055.1 MGP_129S1SvImJ_G0018299.1 mouse_genomes_project 11 52960408 52995587 + MGP_129S1SvImJ_P0029055 Kif3a protein_coding protein_coding MGP_129S1SvImJ_T0029056.1 MGP_129S1SvImJ_G0018299.1 mouse_genomes_project 11 52960537 52995544 + MGP_129S1SvImJ_P0029056 Kif3a protein_coding protein_coding MGP_129S1SvImJ_T0029057.1 MGP_129S1SvImJ_G0018299.1 mouse_genomes_project 11 52960727 52972142 + Kif3a protein_coding processed_transcript MGP_129S1SvImJ_T0029058.1 MGP_129S1SvImJ_G0018299.1 mouse_genomes_project 11 52960872 52972767 + MGP_129S1SvImJ_P0029058 Kif3a protein_coding protein_coding MGP_129S1SvImJ_T0029059.1 MGP_129S1SvImJ_G0018299.1 mouse_genomes_project 11 52972126 52979878 + MGP_129S1SvImJ_P0029059 Kif3a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029060.1 MGP_129S1SvImJ_G0018299.1 mouse_genomes_project 11 52986932 52995785 + MGP_129S1SvImJ_P0029060 Kif3a protein_coding protein_coding MGP_129S1SvImJ_T0098818.1 MGP_129S1SvImJ_G0036900.1 mouse_genomes_project 11 123207246 123208210 - Gm11749 sense_intronic sense_intronic MGP_129S1SvImJ_T0027892.1 MGP_129S1SvImJ_G0017998.1 mouse_genomes_project 11 2129213 2180453 - MGP_129S1SvImJ_P0027892 Emid1 protein_coding protein_coding MGP_129S1SvImJ_T0027893.1 MGP_129S1SvImJ_G0017998.1 mouse_genomes_project 11 2129213 2159157 - MGP_129S1SvImJ_P0027893 Emid1 protein_coding protein_coding MGP_129S1SvImJ_T0027894.1 MGP_129S1SvImJ_G0017998.1 mouse_genomes_project 11 2129214 2180436 - MGP_129S1SvImJ_P0027894 Emid1 protein_coding protein_coding MGP_129S1SvImJ_T0027895.1 MGP_129S1SvImJ_G0017998.1 mouse_genomes_project 11 2129219 2158034 - MGP_129S1SvImJ_P0027895 Emid1 protein_coding protein_coding MGP_129S1SvImJ_T0027896.1 MGP_129S1SvImJ_G0017998.1 mouse_genomes_project 11 2129593 2157621 - Emid1 protein_coding retained_intron MGP_129S1SvImJ_T0027897.1 MGP_129S1SvImJ_G0017998.1 mouse_genomes_project 11 2129855 2157442 - MGP_129S1SvImJ_P0027897 Emid1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027898.1 MGP_129S1SvImJ_G0017998.1 mouse_genomes_project 11 2160353 2180433 - MGP_129S1SvImJ_P0027898 Emid1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027899.1 MGP_129S1SvImJ_G0017998.1 mouse_genomes_project 11 2163782 2178480 - Emid1 protein_coding processed_transcript MGP_129S1SvImJ_T0003330.1 MGP_129S1SvImJ_G0003075.1 mouse_genomes_project 11 107394195 107402660 - Gm11659 antisense antisense MGP_129S1SvImJ_T0003207.1 MGP_129S1SvImJ_G0002976.1 mouse_genomes_project 11 60110952 60112073 + Gm12265 antisense antisense MGP_129S1SvImJ_T0100509.1 MGP_129S1SvImJ_G0038576.1 mouse_genomes_project 11 69479241 69479376 + Snord118 snoRNA snoRNA MGP_129S1SvImJ_T0009761.1 MGP_129S1SvImJ_G0007877.1 mouse_genomes_project 11 104200643 104200722 - Gm25593 miRNA miRNA MGP_129S1SvImJ_T0030343.1 MGP_129S1SvImJ_G0018610.1 mouse_genomes_project 11 71200659 71205961 + MGP_129S1SvImJ_P0030343 Eno3 protein_coding protein_coding MGP_129S1SvImJ_T0030344.1 MGP_129S1SvImJ_G0018610.1 mouse_genomes_project 11 71200659 71204262 + MGP_129S1SvImJ_P0030344 Eno3 protein_coding protein_coding MGP_129S1SvImJ_T0030345.1 MGP_129S1SvImJ_G0018610.1 mouse_genomes_project 11 71200661 71205961 + MGP_129S1SvImJ_P0030345 Eno3 protein_coding protein_coding MGP_129S1SvImJ_T0030346.1 MGP_129S1SvImJ_G0018610.1 mouse_genomes_project 11 71200742 71201875 + MGP_129S1SvImJ_P0030346 Eno3 protein_coding protein_coding MGP_129S1SvImJ_T0030347.1 MGP_129S1SvImJ_G0018610.1 mouse_genomes_project 11 71201144 71201904 + MGP_129S1SvImJ_P0030347 Eno3 protein_coding protein_coding MGP_129S1SvImJ_T0030348.1 MGP_129S1SvImJ_G0018610.1 mouse_genomes_project 11 71201252 71205958 + MGP_129S1SvImJ_P0030348 Eno3 protein_coding protein_coding MGP_129S1SvImJ_T0030349.1 MGP_129S1SvImJ_G0018610.1 mouse_genomes_project 11 71201795 71204301 + Eno3 protein_coding retained_intron MGP_129S1SvImJ_T0030350.1 MGP_129S1SvImJ_G0018610.1 mouse_genomes_project 11 71204229 71205712 + MGP_129S1SvImJ_P0030350 Eno3 protein_coding protein_coding MGP_129S1SvImJ_T0033587.1 MGP_129S1SvImJ_G0019409.1 mouse_genomes_project 11 120089544 120093812 - MGP_129S1SvImJ_P0033587 Galk1 protein_coding protein_coding MGP_129S1SvImJ_T0031234.1 MGP_129S1SvImJ_G0018833.1 mouse_genomes_project 11 84174951 84189854 + MGP_129S1SvImJ_P0031234 Fndc8 protein_coding protein_coding MGP_129S1SvImJ_T0006230.1 MGP_129S1SvImJ_G0005203.1 mouse_genomes_project 11 31160606 31185094 - Gm12111 lincRNA lincRNA MGP_129S1SvImJ_T0032985.1 MGP_129S1SvImJ_G0019283.1 mouse_genomes_project 11 108399009 108509935 + MGP_129S1SvImJ_P0032985 Tlk2 protein_coding protein_coding MGP_129S1SvImJ_T0032986.1 MGP_129S1SvImJ_G0019283.1 mouse_genomes_project 11 108400948 108435092 + Tlk2 protein_coding retained_intron MGP_129S1SvImJ_T0032987.1 MGP_129S1SvImJ_G0019283.1 mouse_genomes_project 11 108401794 108508156 + MGP_129S1SvImJ_P0032987 Tlk2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0032988.1 MGP_129S1SvImJ_G0019283.1 mouse_genomes_project 11 108401970 108435795 + MGP_129S1SvImJ_P0032988 Tlk2 protein_coding protein_coding MGP_129S1SvImJ_T0032989.1 MGP_129S1SvImJ_G0019283.1 mouse_genomes_project 11 108405357 108508151 + MGP_129S1SvImJ_P0032989 Tlk2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032990.1 MGP_129S1SvImJ_G0019283.1 mouse_genomes_project 11 108405357 108502431 + MGP_129S1SvImJ_P0032990 Tlk2 protein_coding protein_coding MGP_129S1SvImJ_T0032991.1 MGP_129S1SvImJ_G0019283.1 mouse_genomes_project 11 108405357 108502845 + MGP_129S1SvImJ_P0032991 Tlk2 protein_coding protein_coding MGP_129S1SvImJ_T0032992.1 MGP_129S1SvImJ_G0019283.1 mouse_genomes_project 11 108405357 108508151 + MGP_129S1SvImJ_P0032992 Tlk2 protein_coding protein_coding MGP_129S1SvImJ_T0032993.1 MGP_129S1SvImJ_G0019283.1 mouse_genomes_project 11 108432652 108464652 + Tlk2 protein_coding retained_intron MGP_129S1SvImJ_T0032994.1 MGP_129S1SvImJ_G0019283.1 mouse_genomes_project 11 108434089 108473531 + MGP_129S1SvImJ_P0032994 Tlk2 protein_coding protein_coding MGP_129S1SvImJ_T0032995.1 MGP_129S1SvImJ_G0019283.1 mouse_genomes_project 11 108470797 108471714 + Tlk2 protein_coding retained_intron MGP_129S1SvImJ_T0032996.1 MGP_129S1SvImJ_G0019283.1 mouse_genomes_project 11 108476817 108495868 + Tlk2 protein_coding processed_transcript MGP_129S1SvImJ_T0031981.1 MGP_129S1SvImJ_G0019024.1 mouse_genomes_project 11 99480762 99499508 - MGP_129S1SvImJ_P0031981 Tbx21 protein_coding protein_coding MGP_129S1SvImJ_T0030048.1 MGP_129S1SvImJ_G0018548.1 mouse_genomes_project 11 70141588 70155346 - MGP_129S1SvImJ_P0030048 Tnfsfm13 protein_coding protein_coding MGP_129S1SvImJ_T0030051.1 MGP_129S1SvImJ_G0018548.1 mouse_genomes_project 11 70142059 70155058 - MGP_129S1SvImJ_P0030051 Tnfsfm13 protein_coding protein_coding MGP_129S1SvImJ_T0030052.1 MGP_129S1SvImJ_G0018548.1 mouse_genomes_project 11 70142242 70155057 - MGP_129S1SvImJ_P0030052 Tnfsfm13 protein_coding protein_coding MGP_129S1SvImJ_T0031734.1 MGP_129S1SvImJ_G0018957.1 mouse_genomes_project 11 96574614 96580804 - Spata20 protein_coding processed_transcript MGP_129S1SvImJ_T0031735.1 MGP_129S1SvImJ_G0018957.1 mouse_genomes_project 11 96574614 96581051 - MGP_129S1SvImJ_P0031735 Spata20 protein_coding protein_coding MGP_129S1SvImJ_T0031736.1 MGP_129S1SvImJ_G0018957.1 mouse_genomes_project 11 96578781 96580115 - Spata20 protein_coding processed_transcript MGP_129S1SvImJ_T0031737.1 MGP_129S1SvImJ_G0018957.1 mouse_genomes_project 11 96579055 96580802 - Spata20 protein_coding processed_transcript MGP_129S1SvImJ_T0031738.1 MGP_129S1SvImJ_G0018957.1 mouse_genomes_project 11 96580310 96581874 - Spata20 protein_coding processed_transcript MGP_129S1SvImJ_T0032382.1 MGP_129S1SvImJ_G0019161.1 mouse_genomes_project 11 103345529 103347498 - Dnajc7 protein_coding processed_transcript MGP_129S1SvImJ_T0032383.1 MGP_129S1SvImJ_G0019161.1 mouse_genomes_project 11 103345529 103386824 - MGP_129S1SvImJ_P0032383 Dnajc7 protein_coding protein_coding MGP_129S1SvImJ_T0032384.1 MGP_129S1SvImJ_G0019161.1 mouse_genomes_project 11 103345975 103348204 - Dnajc7 protein_coding processed_transcript MGP_129S1SvImJ_T0032385.1 MGP_129S1SvImJ_G0019161.1 mouse_genomes_project 11 103347051 103353729 - Dnajc7 protein_coding processed_transcript MGP_129S1SvImJ_T0032386.1 MGP_129S1SvImJ_G0019161.1 mouse_genomes_project 11 103353587 103386233 - MGP_129S1SvImJ_P0032386 Dnajc7 protein_coding protein_coding MGP_129S1SvImJ_T0032387.1 MGP_129S1SvImJ_G0019161.1 mouse_genomes_project 11 103353594 103386254 - Dnajc7 protein_coding processed_transcript MGP_129S1SvImJ_T0032388.1 MGP_129S1SvImJ_G0019161.1 mouse_genomes_project 11 103353719 103359414 - Dnajc7 protein_coding processed_transcript MGP_129S1SvImJ_T0032389.1 MGP_129S1SvImJ_G0019161.1 mouse_genomes_project 11 103355664 103376148 - MGP_129S1SvImJ_P0032389 Dnajc7 protein_coding protein_coding MGP_129S1SvImJ_T0032390.1 MGP_129S1SvImJ_G0019161.1 mouse_genomes_project 11 103360132 103386236 - Dnajc7 protein_coding processed_transcript MGP_129S1SvImJ_T0032391.1 MGP_129S1SvImJ_G0019161.1 mouse_genomes_project 11 103361041 103386316 - Dnajc7 protein_coding processed_transcript MGP_129S1SvImJ_T0032482.1 MGP_129S1SvImJ_G0019182.1 mouse_genomes_project 11 103934356 103943735 + MGP_129S1SvImJ_P0032482 Tubg1 protein_coding protein_coding MGP_129S1SvImJ_T0032483.1 MGP_129S1SvImJ_G0019182.1 mouse_genomes_project 11 103934564 103943739 + MGP_129S1SvImJ_P0032483 Tubg1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0032484.1 MGP_129S1SvImJ_G0019182.1 mouse_genomes_project 11 103938918 103943144 + Tubg1 protein_coding processed_transcript MGP_129S1SvImJ_T0012511.1 MGP_129S1SvImJ_G0010600.1 mouse_genomes_project 11 14492314 14492469 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033714.1 MGP_129S1SvImJ_G0019432.1 mouse_genomes_project 11 120721467 120732624 + Aanat protein_coding processed_transcript MGP_129S1SvImJ_T0033715.1 MGP_129S1SvImJ_G0019432.1 mouse_genomes_project 11 120728989 120732971 + MGP_129S1SvImJ_P0033715 Aanat protein_coding protein_coding MGP_129S1SvImJ_T0033716.1 MGP_129S1SvImJ_G0019432.1 mouse_genomes_project 11 120728989 120732836 + MGP_129S1SvImJ_P0033716 Aanat protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033717.1 MGP_129S1SvImJ_G0019432.1 mouse_genomes_project 11 120730876 120732836 + MGP_129S1SvImJ_P0033717 Aanat protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033718.1 MGP_129S1SvImJ_G0019432.1 mouse_genomes_project 11 120731071 120731556 + Aanat protein_coding processed_transcript MGP_129S1SvImJ_T0099285.1 MGP_129S1SvImJ_G0037352.1 mouse_genomes_project 11 104490617 104490808 + Gm26316 snRNA snRNA MGP_129S1SvImJ_T0030527.1 MGP_129S1SvImJ_G0018647.1 mouse_genomes_project 11 73626118 73660286 + MGP_129S1SvImJ_P0030527 Atp2a3 protein_coding protein_coding MGP_129S1SvImJ_T0030528.1 MGP_129S1SvImJ_G0018647.1 mouse_genomes_project 11 73626118 73660286 + MGP_129S1SvImJ_P0030528 Atp2a3 protein_coding protein_coding MGP_129S1SvImJ_T0030529.1 MGP_129S1SvImJ_G0018647.1 mouse_genomes_project 11 73626118 73660286 + MGP_129S1SvImJ_P0030529 Atp2a3 protein_coding protein_coding MGP_129S1SvImJ_T0030530.1 MGP_129S1SvImJ_G0018647.1 mouse_genomes_project 11 73626118 73660287 + MGP_129S1SvImJ_P0030530 Atp2a3 protein_coding protein_coding MGP_129S1SvImJ_T0030531.1 MGP_129S1SvImJ_G0018647.1 mouse_genomes_project 11 73626118 73660287 + MGP_129S1SvImJ_P0030531 Atp2a3 protein_coding protein_coding MGP_129S1SvImJ_T0030532.1 MGP_129S1SvImJ_G0018647.1 mouse_genomes_project 11 73626239 73635699 + Atp2a3 protein_coding retained_intron MGP_129S1SvImJ_T0030533.1 MGP_129S1SvImJ_G0018647.1 mouse_genomes_project 11 73649340 73650789 + Atp2a3 protein_coding processed_transcript MGP_129S1SvImJ_T0012509.1 MGP_129S1SvImJ_G0010598.1 mouse_genomes_project 11 14018450 14019363 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032224.1 MGP_129S1SvImJ_G0019080.1 mouse_genomes_project 11 101624746 101656779 - MGP_129S1SvImJ_P0032224 Top2a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0032225.1 MGP_129S1SvImJ_G0019080.1 mouse_genomes_project 11 101624747 101656902 - MGP_129S1SvImJ_P0032225 Top2a protein_coding protein_coding MGP_129S1SvImJ_T0032226.1 MGP_129S1SvImJ_G0019080.1 mouse_genomes_project 11 101624875 101627529 - Top2a protein_coding processed_transcript MGP_129S1SvImJ_T0032227.1 MGP_129S1SvImJ_G0019080.1 mouse_genomes_project 11 101625271 101627175 - Top2a protein_coding processed_transcript MGP_129S1SvImJ_T0032228.1 MGP_129S1SvImJ_G0019080.1 mouse_genomes_project 11 101631757 101633071 - Top2a protein_coding processed_transcript MGP_129S1SvImJ_T0032229.1 MGP_129S1SvImJ_G0019080.1 mouse_genomes_project 11 101635434 101638343 - Top2a protein_coding processed_transcript MGP_129S1SvImJ_T0032230.1 MGP_129S1SvImJ_G0019080.1 mouse_genomes_project 11 101649278 101654932 - Top2a protein_coding processed_transcript MGP_129S1SvImJ_T0032231.1 MGP_129S1SvImJ_G0019080.1 mouse_genomes_project 11 101654806 101656891 - Top2a protein_coding processed_transcript MGP_129S1SvImJ_T0033019.1 MGP_129S1SvImJ_G0019288.1 mouse_genomes_project 11 109234277 109257791 + MGP_129S1SvImJ_P0033019 Ace protein_coding protein_coding MGP_129S1SvImJ_T0033020.1 MGP_129S1SvImJ_G0019288.1 mouse_genomes_project 11 109237657 109257087 + MGP_129S1SvImJ_P0033020 Ace protein_coding protein_coding MGP_129S1SvImJ_T0033021.1 MGP_129S1SvImJ_G0019288.1 mouse_genomes_project 11 109241540 109257080 + MGP_129S1SvImJ_P0033021 Ace protein_coding protein_coding MGP_129S1SvImJ_T0033022.1 MGP_129S1SvImJ_G0019288.1 mouse_genomes_project 11 109242935 109252940 + Ace protein_coding processed_transcript MGP_129S1SvImJ_T0003272.1 MGP_129S1SvImJ_G0003029.1 mouse_genomes_project 11 88699189 88704528 - Gm11491 antisense antisense MGP_129S1SvImJ_T0003273.1 MGP_129S1SvImJ_G0003029.1 mouse_genomes_project 11 88699407 88704581 - Gm11491 antisense antisense MGP_129S1SvImJ_T0012667.1 MGP_129S1SvImJ_G0010756.1 mouse_genomes_project 11 70084587 70084769 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003188.1 MGP_129S1SvImJ_G0002961.1 mouse_genomes_project 11 54306916 54311964 + Lyrm7os antisense antisense MGP_129S1SvImJ_T0032269.1 MGP_129S1SvImJ_G0019099.1 mouse_genomes_project 11 102234723 102235023 - MGP_129S1SvImJ_P0032269 Gm11939 protein_coding protein_coding MGP_129S1SvImJ_T0027967.1 MGP_129S1SvImJ_G0018017.1 mouse_genomes_project 11 3304518 3323642 - MGP_129S1SvImJ_P0027967 Npc1l1 protein_coding protein_coding MGP_129S1SvImJ_T0012663.1 MGP_129S1SvImJ_G0010752.1 mouse_genomes_project 11 68363318 68363989 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003170.1 MGP_129S1SvImJ_G0002945.1 mouse_genomes_project 11 45257228 45259958 + Gm12167 antisense antisense MGP_129S1SvImJ_T0031421.1 MGP_129S1SvImJ_G0018883.1 mouse_genomes_project 11 87363721 87373137 + MGP_129S1SvImJ_P0031421 Tbx2 protein_coding protein_coding MGP_129S1SvImJ_T0017291.1 MGP_129S1SvImJ_G0015212.1 mouse_genomes_project 11 106827898 106828483 + Gm11642 processed_transcript processed_transcript MGP_129S1SvImJ_T0003210.1 MGP_129S1SvImJ_G0002979.1 mouse_genomes_project 11 61492328 61493150 + Gm12272 antisense antisense MGP_129S1SvImJ_T0029620.1 MGP_129S1SvImJ_G0018450.1 mouse_genomes_project 11 62265208 62284632 + MGP_129S1SvImJ_P0029620 Adora2b protein_coding protein_coding MGP_129S1SvImJ_T0006273.1 MGP_129S1SvImJ_G0005243.1 mouse_genomes_project 11 65020683 65023835 - Gm12292 lincRNA lincRNA MGP_129S1SvImJ_T0031778.1 MGP_129S1SvImJ_G0018969.1 mouse_genomes_project 11 96912811 96918259 - MGP_129S1SvImJ_P0031778 Tmem92 protein_coding protein_coding MGP_129S1SvImJ_T0031779.1 MGP_129S1SvImJ_G0018969.1 mouse_genomes_project 11 96913358 96918056 - MGP_129S1SvImJ_P0031779 Tmem92 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031780.1 MGP_129S1SvImJ_G0018969.1 mouse_genomes_project 11 96913358 96918056 - MGP_129S1SvImJ_P0031780 Tmem92 protein_coding protein_coding MGP_129S1SvImJ_T0031198.1 MGP_129S1SvImJ_G0018823.1 mouse_genomes_project 11 83301855 83309730 + MGP_129S1SvImJ_P0031198 Ccl11 protein_coding protein_coding MGP_129S1SvImJ_T0003196.1 MGP_129S1SvImJ_G0002968.1 mouse_genomes_project 11 57797714 57800177 + Gm12246 antisense antisense MGP_129S1SvImJ_T0028433.1 MGP_129S1SvImJ_G0018122.1 mouse_genomes_project 11 29808130 29819352 - MGP_129S1SvImJ_P0028433 Bod1 protein_coding protein_coding MGP_129S1SvImJ_T0028434.1 MGP_129S1SvImJ_G0018122.1 mouse_genomes_project 11 29814161 29819194 - MGP_129S1SvImJ_P0028434 Bod1 protein_coding protein_coding MGP_129S1SvImJ_T0032047.1 MGP_129S1SvImJ_G0019039.1 mouse_genomes_project 11 100210199 100215889 - Cwc25 protein_coding processed_transcript MGP_129S1SvImJ_T0032048.1 MGP_129S1SvImJ_G0019039.1 mouse_genomes_project 11 100210333 100236207 - MGP_129S1SvImJ_P0032048 Cwc25 protein_coding protein_coding MGP_129S1SvImJ_T0032049.1 MGP_129S1SvImJ_G0019039.1 mouse_genomes_project 11 100212386 100219554 - MGP_129S1SvImJ_P0032049 Cwc25 protein_coding protein_coding MGP_129S1SvImJ_T0032050.1 MGP_129S1SvImJ_G0019039.1 mouse_genomes_project 11 100225916 100236191 - MGP_129S1SvImJ_P0032050 Cwc25 protein_coding protein_coding MGP_129S1SvImJ_T0029454.1 MGP_129S1SvImJ_G0018418.1 mouse_genomes_project 11 60333705 60340966 + Drg2 protein_coding retained_intron MGP_129S1SvImJ_T0029455.1 MGP_129S1SvImJ_G0018418.1 mouse_genomes_project 11 60333705 60347340 + MGP_129S1SvImJ_P0029455 Drg2 protein_coding protein_coding MGP_129S1SvImJ_T0029456.1 MGP_129S1SvImJ_G0018418.1 mouse_genomes_project 11 60333738 60341764 + Drg2 protein_coding retained_intron MGP_129S1SvImJ_T0029457.1 MGP_129S1SvImJ_G0018418.1 mouse_genomes_project 11 60338541 60339448 + Drg2 protein_coding retained_intron MGP_129S1SvImJ_T0029458.1 MGP_129S1SvImJ_G0018418.1 mouse_genomes_project 11 60340619 60342159 + Drg2 protein_coding retained_intron MGP_129S1SvImJ_T0032294.1 MGP_129S1SvImJ_G0019124.1 mouse_genomes_project 11 102571042 102572187 + MGP_129S1SvImJ_P0032294 Gm11568 protein_coding protein_coding MGP_129S1SvImJ_T0017222.1 MGP_129S1SvImJ_G0015172.1 mouse_genomes_project 11 58011020 58012472 + 1700047K16Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0003262.1 MGP_129S1SvImJ_G0003023.1 mouse_genomes_project 11 84054324 84055766 - Gm11423 antisense antisense MGP_129S1SvImJ_T0003263.1 MGP_129S1SvImJ_G0003023.1 mouse_genomes_project 11 84054554 84055766 - Gm11423 antisense antisense MGP_129S1SvImJ_T0017169.1 MGP_129S1SvImJ_G0015146.1 mouse_genomes_project 11 158399 172340 + Gm11944 processed_transcript processed_transcript MGP_129S1SvImJ_T0028715.1 MGP_129S1SvImJ_G0018201.1 mouse_genomes_project 11 45762230 45797934 + MGP_129S1SvImJ_P0028715 Timd4 protein_coding protein_coding MGP_129S1SvImJ_T0000871.1 MGP_129S1SvImJ_G0000804.1 mouse_genomes_project 11 43460969 43468413 - TEC TEC MGP_129S1SvImJ_T0028806.1 MGP_129S1SvImJ_G0018236.1 mouse_genomes_project 11 48810669 48856154 - MGP_129S1SvImJ_P0028806 Cnot6 protein_coding protein_coding MGP_129S1SvImJ_T0028807.1 MGP_129S1SvImJ_G0018236.1 mouse_genomes_project 11 48813864 48843373 - Cnot6 protein_coding processed_transcript MGP_129S1SvImJ_T0028808.1 MGP_129S1SvImJ_G0018236.1 mouse_genomes_project 11 48813879 48856141 - MGP_129S1SvImJ_P0028808 Cnot6 protein_coding protein_coding MGP_129S1SvImJ_T0028809.1 MGP_129S1SvImJ_G0018236.1 mouse_genomes_project 11 48816550 48819185 - Cnot6 protein_coding processed_transcript MGP_129S1SvImJ_T0028810.1 MGP_129S1SvImJ_G0018236.1 mouse_genomes_project 11 48819936 48821509 - Cnot6 protein_coding processed_transcript MGP_129S1SvImJ_T0028015.1 MGP_129S1SvImJ_G0018028.1 mouse_genomes_project 11 3764369 3775984 - MGP_129S1SvImJ_P0028015 Tbrg4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028016.1 MGP_129S1SvImJ_G0018028.1 mouse_genomes_project 11 3764370 3776008 - MGP_129S1SvImJ_P0028016 Tbrg4 protein_coding protein_coding MGP_129S1SvImJ_T0028017.1 MGP_129S1SvImJ_G0018028.1 mouse_genomes_project 11 3765194 3775984 - MGP_129S1SvImJ_P0028017 Tbrg4 protein_coding protein_coding MGP_129S1SvImJ_T0028018.1 MGP_129S1SvImJ_G0018028.1 mouse_genomes_project 11 3765196 3775984 - MGP_129S1SvImJ_P0028018 Tbrg4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028019.1 MGP_129S1SvImJ_G0018028.1 mouse_genomes_project 11 3766025 3766802 - Tbrg4 protein_coding retained_intron MGP_129S1SvImJ_T0028020.1 MGP_129S1SvImJ_G0018028.1 mouse_genomes_project 11 3768327 3769687 - Tbrg4 protein_coding processed_transcript MGP_129S1SvImJ_T0028021.1 MGP_129S1SvImJ_G0018028.1 mouse_genomes_project 11 3768357 3769217 - Tbrg4 protein_coding retained_intron MGP_129S1SvImJ_T0028022.1 MGP_129S1SvImJ_G0018028.1 mouse_genomes_project 11 3768773 3770023 - Tbrg4 protein_coding retained_intron MGP_129S1SvImJ_T0028023.1 MGP_129S1SvImJ_G0018028.1 mouse_genomes_project 11 3768951 3769837 - Tbrg4 protein_coding processed_transcript MGP_129S1SvImJ_T0028024.1 MGP_129S1SvImJ_G0018028.1 mouse_genomes_project 11 3769768 3776008 - MGP_129S1SvImJ_P0028024 Tbrg4 protein_coding protein_coding MGP_129S1SvImJ_T0028025.1 MGP_129S1SvImJ_G0018028.1 mouse_genomes_project 11 3771971 3775963 - Tbrg4 protein_coding processed_transcript MGP_129S1SvImJ_T0028026.1 MGP_129S1SvImJ_G0018028.1 mouse_genomes_project 11 3772655 3774230 - MGP_129S1SvImJ_P0028026 Tbrg4 protein_coding protein_coding MGP_129S1SvImJ_T0032300.1 MGP_129S1SvImJ_G0019130.1 mouse_genomes_project 11 102676370 102677447 + MGP_129S1SvImJ_P0032300 Krtap9-5 protein_coding protein_coding MGP_129S1SvImJ_T0099251.1 MGP_129S1SvImJ_G0037318.1 mouse_genomes_project 11 69656816 69656921 + Gm23194 snRNA snRNA MGP_129S1SvImJ_T0030519.1 MGP_129S1SvImJ_G0018646.1 mouse_genomes_project 11 73447131 73509498 + Zzef1 protein_coding retained_intron MGP_129S1SvImJ_T0030520.1 MGP_129S1SvImJ_G0018646.1 mouse_genomes_project 11 73447131 73590331 + MGP_129S1SvImJ_P0030520 Zzef1 protein_coding protein_coding MGP_129S1SvImJ_T0030521.1 MGP_129S1SvImJ_G0018646.1 mouse_genomes_project 11 73447159 73590329 + MGP_129S1SvImJ_P0030521 Zzef1 protein_coding protein_coding MGP_129S1SvImJ_T0030522.1 MGP_129S1SvImJ_G0018646.1 mouse_genomes_project 11 73447202 73587930 + MGP_129S1SvImJ_P0030522 Zzef1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0030523.1 MGP_129S1SvImJ_G0018646.1 mouse_genomes_project 11 73498689 73508863 + Zzef1 protein_coding processed_transcript MGP_129S1SvImJ_T0030524.1 MGP_129S1SvImJ_G0018646.1 mouse_genomes_project 11 73573486 73589023 + Zzef1 protein_coding retained_intron MGP_129S1SvImJ_T0030525.1 MGP_129S1SvImJ_G0018646.1 mouse_genomes_project 11 73576133 73580078 + Zzef1 protein_coding retained_intron MGP_129S1SvImJ_T0030526.1 MGP_129S1SvImJ_G0018646.1 mouse_genomes_project 11 73582023 73590331 + Zzef1 protein_coding retained_intron MGP_129S1SvImJ_T0006330.1 MGP_129S1SvImJ_G0005282.1 mouse_genomes_project 11 90893867 90896154 - Gm11497 lincRNA lincRNA MGP_129S1SvImJ_T0032446.1 MGP_129S1SvImJ_G0019174.1 mouse_genomes_project 11 103752795 103768960 - MGP_129S1SvImJ_P0032446 Ptrf protein_coding protein_coding MGP_129S1SvImJ_T0032447.1 MGP_129S1SvImJ_G0019174.1 mouse_genomes_project 11 103762479 103768624 - Ptrf protein_coding processed_transcript MGP_129S1SvImJ_T0099238.1 MGP_129S1SvImJ_G0037305.1 mouse_genomes_project 11 46907557 46907718 - Gm23039 snRNA snRNA MGP_129S1SvImJ_T0032334.1 MGP_129S1SvImJ_G0019151.1 mouse_genomes_project 11 103107229 103115991 - MGP_129S1SvImJ_P0032334 Hap1 protein_coding protein_coding MGP_129S1SvImJ_T0032335.1 MGP_129S1SvImJ_G0019151.1 mouse_genomes_project 11 103108760 103115950 - MGP_129S1SvImJ_P0032335 Hap1 protein_coding protein_coding MGP_129S1SvImJ_T0032336.1 MGP_129S1SvImJ_G0019151.1 mouse_genomes_project 11 103109199 103113903 - MGP_129S1SvImJ_P0032336 Hap1 protein_coding protein_coding MGP_129S1SvImJ_T0032337.1 MGP_129S1SvImJ_G0019151.1 mouse_genomes_project 11 103109319 103111769 - MGP_129S1SvImJ_P0032337 Hap1 protein_coding protein_coding MGP_129S1SvImJ_T0032338.1 MGP_129S1SvImJ_G0019151.1 mouse_genomes_project 11 103112119 103115246 - MGP_129S1SvImJ_P0032338 Hap1 protein_coding protein_coding MGP_129S1SvImJ_T0029264.1 MGP_129S1SvImJ_G0018355.1 mouse_genomes_project 11 58190258 58191324 - MGP_129S1SvImJ_P0029264 Olfr30 protein_coding protein_coding MGP_129S1SvImJ_T0032326.1 MGP_129S1SvImJ_G0019148.1 mouse_genomes_project 11 103021895 103024986 - Krt42 protein_coding retained_intron MGP_129S1SvImJ_T0032327.1 MGP_129S1SvImJ_G0019148.1 mouse_genomes_project 11 103021900 103028880 - MGP_129S1SvImJ_P0032327 Krt42 protein_coding protein_coding MGP_129S1SvImJ_T0012717.1 MGP_129S1SvImJ_G0010806.1 mouse_genomes_project 11 88203228 88203827 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032932.1 MGP_129S1SvImJ_G0019271.1 mouse_genomes_project 11 107089788 107110524 + MGP_129S1SvImJ_P0032932 Arf2 protein_coding protein_coding MGP_129S1SvImJ_T0032933.1 MGP_129S1SvImJ_G0019271.1 mouse_genomes_project 11 107089920 107110524 + MGP_129S1SvImJ_P0032933 Arf2 protein_coding protein_coding MGP_129S1SvImJ_T0032934.1 MGP_129S1SvImJ_G0019271.1 mouse_genomes_project 11 107096014 107107085 + Arf2 protein_coding retained_intron MGP_129S1SvImJ_T0032935.1 MGP_129S1SvImJ_G0019271.1 mouse_genomes_project 11 107104775 107108814 + MGP_129S1SvImJ_P0032935 Arf2 protein_coding protein_coding MGP_129S1SvImJ_T0017219.1 MGP_129S1SvImJ_G0015171.1 mouse_genomes_project 11 57429805 57439739 - processed_transcript processed_transcript MGP_129S1SvImJ_T0017220.1 MGP_129S1SvImJ_G0015171.1 mouse_genomes_project 11 57429825 57439736 - processed_transcript processed_transcript MGP_129S1SvImJ_T0017221.1 MGP_129S1SvImJ_G0015171.1 mouse_genomes_project 11 57429936 57439720 - processed_transcript processed_transcript MGP_129S1SvImJ_T0099287.1 MGP_129S1SvImJ_G0037354.1 mouse_genomes_project 11 104547024 104547484 + Gm24950 snRNA snRNA MGP_129S1SvImJ_T0032253.1 MGP_129S1SvImJ_G0019086.1 mouse_genomes_project 11 101933311 101941058 - MGP_129S1SvImJ_P0032253 Krt24 protein_coding protein_coding MGP_129S1SvImJ_T0017257.1 MGP_129S1SvImJ_G0015191.1 mouse_genomes_project 11 84923561 84982865 + E230016K23Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017258.1 MGP_129S1SvImJ_G0015191.1 mouse_genomes_project 11 84923589 84947332 + E230016K23Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017259.1 MGP_129S1SvImJ_G0015191.1 mouse_genomes_project 11 84980833 84982075 + E230016K23Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0032166.1 MGP_129S1SvImJ_G0019068.1 mouse_genomes_project 11 101274347 101288536 + MGP_129S1SvImJ_P0032166 Psmd3 protein_coding protein_coding MGP_129S1SvImJ_T0032167.1 MGP_129S1SvImJ_G0019068.1 mouse_genomes_project 11 101274358 101285064 + Psmd3 protein_coding retained_intron MGP_129S1SvImJ_T0032168.1 MGP_129S1SvImJ_G0019068.1 mouse_genomes_project 11 101274384 101287598 + Psmd3 protein_coding retained_intron MGP_129S1SvImJ_T0032169.1 MGP_129S1SvImJ_G0019068.1 mouse_genomes_project 11 101279582 101286388 + MGP_129S1SvImJ_P0032169 Psmd3 protein_coding protein_coding MGP_129S1SvImJ_T0032170.1 MGP_129S1SvImJ_G0019068.1 mouse_genomes_project 11 101283007 101284016 + Psmd3 protein_coding retained_intron MGP_129S1SvImJ_T0100518.1 MGP_129S1SvImJ_G0038585.1 mouse_genomes_project 11 77919528 77919649 + Gm22772 snoRNA snoRNA MGP_129S1SvImJ_T0030165.1 MGP_129S1SvImJ_G0018574.1 mouse_genomes_project 11 70474384 70484617 + MGP_129S1SvImJ_P0030165 Ctdnep1 protein_coding protein_coding MGP_129S1SvImJ_T0030166.1 MGP_129S1SvImJ_G0018574.1 mouse_genomes_project 11 70477154 70484128 + Ctdnep1 protein_coding retained_intron MGP_129S1SvImJ_T0030167.1 MGP_129S1SvImJ_G0018574.1 mouse_genomes_project 11 70483650 70484737 + Ctdnep1 protein_coding retained_intron MGP_129S1SvImJ_T0030168.1 MGP_129S1SvImJ_G0018574.1 mouse_genomes_project 11 70483670 70484982 + Ctdnep1 protein_coding processed_transcript MGP_129S1SvImJ_T0017319.1 MGP_129S1SvImJ_G0015223.1 mouse_genomes_project 11 123959473 123982124 + Gm11762 processed_transcript processed_transcript MGP_129S1SvImJ_T0032184.1 MGP_129S1SvImJ_G0019071.1 mouse_genomes_project 11 101340816 101353559 + Thra protein_coding processed_transcript MGP_129S1SvImJ_T0032185.1 MGP_129S1SvImJ_G0019071.1 mouse_genomes_project 11 101340979 101353819 + Thra protein_coding processed_transcript MGP_129S1SvImJ_T0032186.1 MGP_129S1SvImJ_G0019071.1 mouse_genomes_project 11 101341080 101353622 + Thra protein_coding processed_transcript MGP_129S1SvImJ_T0032187.1 MGP_129S1SvImJ_G0019071.1 mouse_genomes_project 11 101341987 101359242 + Thra protein_coding processed_transcript MGP_129S1SvImJ_T0032188.1 MGP_129S1SvImJ_G0019071.1 mouse_genomes_project 11 101341987 101370520 + MGP_129S1SvImJ_P0032188 Thra protein_coding protein_coding MGP_129S1SvImJ_T0032189.1 MGP_129S1SvImJ_G0019071.1 mouse_genomes_project 11 101342049 101366645 + MGP_129S1SvImJ_P0032189 Thra protein_coding protein_coding MGP_129S1SvImJ_T0032190.1 MGP_129S1SvImJ_G0019071.1 mouse_genomes_project 11 101342334 101358542 + MGP_129S1SvImJ_P0032190 Thra protein_coding protein_coding MGP_129S1SvImJ_T0032191.1 MGP_129S1SvImJ_G0019071.1 mouse_genomes_project 11 101344391 101353958 + Thra protein_coding processed_transcript MGP_129S1SvImJ_T0032192.1 MGP_129S1SvImJ_G0019071.1 mouse_genomes_project 11 101353766 101369907 + MGP_129S1SvImJ_P0032192 Thra protein_coding protein_coding MGP_129S1SvImJ_T0006283.1 MGP_129S1SvImJ_G0005250.1 mouse_genomes_project 11 71610245 71611818 - 6330403K07Rik lincRNA lincRNA MGP_129S1SvImJ_T0012606.1 MGP_129S1SvImJ_G0010695.1 mouse_genomes_project 11 48923450 48923829 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033408.1 MGP_129S1SvImJ_G0019380.1 mouse_genomes_project 11 119332894 119339761 - MGP_129S1SvImJ_P0033408 Ush1g protein_coding protein_coding MGP_129S1SvImJ_T0030833.1 MGP_129S1SvImJ_G0018737.1 mouse_genomes_project 11 77525922 77549291 + MGP_129S1SvImJ_P0030833 Tusc5 protein_coding protein_coding MGP_129S1SvImJ_T0033729.1 MGP_129S1SvImJ_G0019436.1 mouse_genomes_project 11 120818032 120822183 + MGP_129S1SvImJ_P0033729 1810032O08Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033730.1 MGP_129S1SvImJ_G0019436.1 mouse_genomes_project 11 120818041 120822183 + MGP_129S1SvImJ_P0033730 1810032O08Rik protein_coding protein_coding MGP_129S1SvImJ_T0033731.1 MGP_129S1SvImJ_G0019436.1 mouse_genomes_project 11 120818041 120822180 + MGP_129S1SvImJ_P0033731 1810032O08Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033732.1 MGP_129S1SvImJ_G0019436.1 mouse_genomes_project 11 120818068 120818998 + 1810032O08Rik protein_coding retained_intron MGP_129S1SvImJ_T0033733.1 MGP_129S1SvImJ_G0019436.1 mouse_genomes_project 11 120818080 120820965 + MGP_129S1SvImJ_P0033733 1810032O08Rik protein_coding protein_coding MGP_129S1SvImJ_T0033734.1 MGP_129S1SvImJ_G0019436.1 mouse_genomes_project 11 120818253 120820350 + MGP_129S1SvImJ_P0033734 1810032O08Rik protein_coding protein_coding MGP_129S1SvImJ_T0033735.1 MGP_129S1SvImJ_G0019436.1 mouse_genomes_project 11 120819067 120822184 + MGP_129S1SvImJ_P0033735 1810032O08Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0100496.1 MGP_129S1SvImJ_G0038563.1 mouse_genomes_project 11 47828900 47828967 + Gm25296 snoRNA snoRNA MGP_129S1SvImJ_T0099281.1 MGP_129S1SvImJ_G0037348.1 mouse_genomes_project 11 101025028 101025162 - Gm25106 snRNA snRNA MGP_129S1SvImJ_T0034304.1 MGP_129S1SvImJ_G0019552.1 mouse_genomes_project 11 126168956 126225906 - MGP_129S1SvImJ_P0034304 B3gntl1 protein_coding protein_coding MGP_129S1SvImJ_T0034305.1 MGP_129S1SvImJ_G0019552.1 mouse_genomes_project 11 126180027 126225906 - MGP_129S1SvImJ_P0034305 B3gntl1 protein_coding protein_coding MGP_129S1SvImJ_T0006355.1 MGP_129S1SvImJ_G0005299.1 mouse_genomes_project 11 105619767 105625402 - 2810433D01Rik lincRNA lincRNA MGP_129S1SvImJ_T0006356.1 MGP_129S1SvImJ_G0005299.1 mouse_genomes_project 11 105622286 105625352 - 2810433D01Rik lincRNA lincRNA MGP_129S1SvImJ_T0030014.1 MGP_129S1SvImJ_G0018544.1 mouse_genomes_project 11 70113639 70119548 - MGP_129S1SvImJ_P0030014 Mpdu1 protein_coding protein_coding MGP_129S1SvImJ_T0030015.1 MGP_129S1SvImJ_G0018544.1 mouse_genomes_project 11 70113903 70119470 - MGP_129S1SvImJ_P0030015 Mpdu1 protein_coding protein_coding MGP_129S1SvImJ_T0030016.1 MGP_129S1SvImJ_G0018544.1 mouse_genomes_project 11 70113969 70119493 - MGP_129S1SvImJ_P0030016 Mpdu1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030017.1 MGP_129S1SvImJ_G0018544.1 mouse_genomes_project 11 70114071 70115223 - Mpdu1 protein_coding retained_intron MGP_129S1SvImJ_T0030018.1 MGP_129S1SvImJ_G0018544.1 mouse_genomes_project 11 70114096 70119493 - MGP_129S1SvImJ_P0030018 Mpdu1 protein_coding protein_coding MGP_129S1SvImJ_T0030019.1 MGP_129S1SvImJ_G0018544.1 mouse_genomes_project 11 70114104 70119424 - MGP_129S1SvImJ_P0030019 Mpdu1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030020.1 MGP_129S1SvImJ_G0018544.1 mouse_genomes_project 11 70114155 70115196 - Mpdu1 protein_coding retained_intron MGP_129S1SvImJ_T0030021.1 MGP_129S1SvImJ_G0018544.1 mouse_genomes_project 11 70114675 70119410 - Mpdu1 protein_coding retained_intron MGP_129S1SvImJ_T0030022.1 MGP_129S1SvImJ_G0018544.1 mouse_genomes_project 11 70115289 70119466 - Mpdu1 protein_coding retained_intron MGP_129S1SvImJ_T0030023.1 MGP_129S1SvImJ_G0018544.1 mouse_genomes_project 11 70115418 70116348 - Mpdu1 protein_coding retained_intron MGP_129S1SvImJ_T0027725.1 MGP_129S1SvImJ_G0017962.1 mouse_genomes_project 11 537264 580916 + MGP_129S1SvImJ_P0027725 Morc2a protein_coding protein_coding MGP_129S1SvImJ_T0027726.1 MGP_129S1SvImJ_G0017962.1 mouse_genomes_project 11 537529 558624 + MGP_129S1SvImJ_P0027726 Morc2a protein_coding protein_coding MGP_129S1SvImJ_T0027727.1 MGP_129S1SvImJ_G0017962.1 mouse_genomes_project 11 538023 581023 + MGP_129S1SvImJ_P0027727 Morc2a protein_coding protein_coding MGP_129S1SvImJ_T0027728.1 MGP_129S1SvImJ_G0017962.1 mouse_genomes_project 11 569120 574453 + Morc2a protein_coding processed_transcript MGP_129S1SvImJ_T0027729.1 MGP_129S1SvImJ_G0017962.1 mouse_genomes_project 11 569575 574235 + Morc2a protein_coding processed_transcript MGP_129S1SvImJ_T0030238.1 MGP_129S1SvImJ_G0018588.1 mouse_genomes_project 11 70755745 70760370 - MGP_129S1SvImJ_P0030238 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030243.1 MGP_129S1SvImJ_G0018588.1 mouse_genomes_project 11 70755789 70760343 - MGP_129S1SvImJ_P0030243 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028130.1 MGP_129S1SvImJ_G0018053.1 mouse_genomes_project 11 14344341 14347414 + MGP_129S1SvImJ_P0028130 Fbxo48 protein_coding protein_coding MGP_129S1SvImJ_T0028131.1 MGP_129S1SvImJ_G0018053.1 mouse_genomes_project 11 14344376 14347739 + MGP_129S1SvImJ_P0028131 Fbxo48 protein_coding protein_coding MGP_129S1SvImJ_T0003286.1 MGP_129S1SvImJ_G0003039.1 mouse_genomes_project 11 97527139 97528537 - Gm11521 antisense antisense MGP_129S1SvImJ_T0031192.1 MGP_129S1SvImJ_G0018819.1 mouse_genomes_project 11 83097652 83103395 + 5530401A14Rik protein_coding processed_transcript MGP_129S1SvImJ_T0031193.1 MGP_129S1SvImJ_G0018819.1 mouse_genomes_project 11 83097658 83131558 + MGP_129S1SvImJ_P0031193 5530401A14Rik protein_coding protein_coding MGP_129S1SvImJ_T0028245.1 MGP_129S1SvImJ_G0018084.1 mouse_genomes_project 11 20722236 20735682 + MGP_129S1SvImJ_P0028245 Fam161a protein_coding protein_coding MGP_129S1SvImJ_T0028246.1 MGP_129S1SvImJ_G0018084.1 mouse_genomes_project 11 20723146 20744683 + MGP_129S1SvImJ_P0028246 Fam161a protein_coding protein_coding MGP_129S1SvImJ_T0028247.1 MGP_129S1SvImJ_G0018084.1 mouse_genomes_project 11 20723170 20739187 + MGP_129S1SvImJ_P0028247 Fam161a protein_coding protein_coding MGP_129S1SvImJ_T0028248.1 MGP_129S1SvImJ_G0018084.1 mouse_genomes_project 11 20728091 20739177 + MGP_129S1SvImJ_P0028248 Fam161a protein_coding protein_coding MGP_129S1SvImJ_T0028249.1 MGP_129S1SvImJ_G0018084.1 mouse_genomes_project 11 20735915 20746011 + MGP_129S1SvImJ_P0028249 Fam161a protein_coding protein_coding MGP_129S1SvImJ_T0028250.1 MGP_129S1SvImJ_G0018084.1 mouse_genomes_project 11 20736001 20739176 + MGP_129S1SvImJ_P0028250 Fam161a protein_coding protein_coding MGP_129S1SvImJ_T0009732.1 MGP_129S1SvImJ_G0007848.1 mouse_genomes_project 11 79160456 79160517 + Mir7653 miRNA miRNA MGP_129S1SvImJ_T0012790.1 MGP_129S1SvImJ_G0010879.1 mouse_genomes_project 11 119627364 119627901 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098300.1 MGP_129S1SvImJ_G0036385.1 mouse_genomes_project 11 71078233 71078811 - pseudogene pseudogene MGP_129S1SvImJ_T0032291.1 MGP_129S1SvImJ_G0019121.1 mouse_genomes_project 11 102524271 102526043 - MGP_129S1SvImJ_P0032291 Gm11564 protein_coding protein_coding MGP_129S1SvImJ_T0028799.1 MGP_129S1SvImJ_G0018232.1 mouse_genomes_project 11 48620589 48621623 + MGP_129S1SvImJ_P0028799 Olfr1384 protein_coding protein_coding MGP_129S1SvImJ_T0028266.1 MGP_129S1SvImJ_G0018087.1 mouse_genomes_project 11 21247567 21256557 - MGP_129S1SvImJ_P0028266 Ahsa2 protein_coding protein_coding MGP_129S1SvImJ_T0028267.1 MGP_129S1SvImJ_G0018087.1 mouse_genomes_project 11 21248601 21251325 - Ahsa2 protein_coding processed_transcript MGP_129S1SvImJ_T0028268.1 MGP_129S1SvImJ_G0018087.1 mouse_genomes_project 11 21249339 21250443 - Ahsa2 protein_coding processed_transcript MGP_129S1SvImJ_T0028269.1 MGP_129S1SvImJ_G0018087.1 mouse_genomes_project 11 21249416 21256873 - MGP_129S1SvImJ_P0028269 Ahsa2 protein_coding protein_coding MGP_129S1SvImJ_T0028270.1 MGP_129S1SvImJ_G0018087.1 mouse_genomes_project 11 21249445 21250096 - Ahsa2 protein_coding processed_transcript MGP_129S1SvImJ_T0028271.1 MGP_129S1SvImJ_G0018087.1 mouse_genomes_project 11 21250127 21256924 - MGP_129S1SvImJ_P0028271 Ahsa2 protein_coding protein_coding MGP_129S1SvImJ_T0028272.1 MGP_129S1SvImJ_G0018087.1 mouse_genomes_project 11 21252172 21256914 - MGP_129S1SvImJ_P0028272 Ahsa2 protein_coding protein_coding MGP_129S1SvImJ_T0012497.1 MGP_129S1SvImJ_G0010586.1 mouse_genomes_project 11 8586721 8587551 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028333.1 MGP_129S1SvImJ_G0018102.1 mouse_genomes_project 11 26850100 26925754 + MGP_129S1SvImJ_P0028333 Efemp1 protein_coding protein_coding MGP_129S1SvImJ_T0028334.1 MGP_129S1SvImJ_G0018102.1 mouse_genomes_project 11 26850140 26920537 + Efemp1 protein_coding processed_transcript MGP_129S1SvImJ_T0028335.1 MGP_129S1SvImJ_G0018102.1 mouse_genomes_project 11 26914675 26925754 + MGP_129S1SvImJ_P0028335 Efemp1 protein_coding protein_coding MGP_129S1SvImJ_T0029570.1 MGP_129S1SvImJ_G0018442.1 mouse_genomes_project 11 61481834 61543482 - MGP_129S1SvImJ_P0029570 Epn2 protein_coding protein_coding MGP_129S1SvImJ_T0029571.1 MGP_129S1SvImJ_G0018442.1 mouse_genomes_project 11 61481834 61543466 - MGP_129S1SvImJ_P0029571 Epn2 protein_coding protein_coding MGP_129S1SvImJ_T0029572.1 MGP_129S1SvImJ_G0018442.1 mouse_genomes_project 11 61481834 61543466 - MGP_129S1SvImJ_P0029572 Epn2 protein_coding protein_coding MGP_129S1SvImJ_T0029573.1 MGP_129S1SvImJ_G0018442.1 mouse_genomes_project 11 61481834 61543482 - MGP_129S1SvImJ_P0029573 Epn2 protein_coding protein_coding MGP_129S1SvImJ_T0029574.1 MGP_129S1SvImJ_G0018442.1 mouse_genomes_project 11 61481835 61543484 - MGP_129S1SvImJ_P0029574 Epn2 protein_coding protein_coding MGP_129S1SvImJ_T0029575.1 MGP_129S1SvImJ_G0018442.1 mouse_genomes_project 11 61481835 61543484 - MGP_129S1SvImJ_P0029575 Epn2 protein_coding protein_coding MGP_129S1SvImJ_T0029576.1 MGP_129S1SvImJ_G0018442.1 mouse_genomes_project 11 61487753 61510942 - MGP_129S1SvImJ_P0029576 Epn2 protein_coding protein_coding MGP_129S1SvImJ_T0029577.1 MGP_129S1SvImJ_G0018442.1 mouse_genomes_project 11 61497233 61508879 - MGP_129S1SvImJ_P0029577 Epn2 protein_coding protein_coding MGP_129S1SvImJ_T0029578.1 MGP_129S1SvImJ_G0018442.1 mouse_genomes_project 11 61498983 61511111 - Epn2 protein_coding retained_intron MGP_129S1SvImJ_T0029579.1 MGP_129S1SvImJ_G0018442.1 mouse_genomes_project 11 61511074 61543455 - MGP_129S1SvImJ_P0029579 Epn2 protein_coding protein_coding MGP_129S1SvImJ_T0029580.1 MGP_129S1SvImJ_G0018442.1 mouse_genomes_project 11 61511260 61543455 - MGP_129S1SvImJ_P0029580 Epn2 protein_coding protein_coding MGP_129S1SvImJ_T0029581.1 MGP_129S1SvImJ_G0018442.1 mouse_genomes_project 11 61511317 61543459 - Epn2 protein_coding processed_transcript MGP_129S1SvImJ_T0029582.1 MGP_129S1SvImJ_G0018442.1 mouse_genomes_project 11 61519270 61543467 - Epn2 protein_coding processed_transcript MGP_129S1SvImJ_T0031190.1 MGP_129S1SvImJ_G0018818.1 mouse_genomes_project 11 82066271 83206063 - MGP_129S1SvImJ_P0031190 Asic2 protein_coding protein_coding MGP_129S1SvImJ_T0031191.1 MGP_129S1SvImJ_G0018818.1 mouse_genomes_project 11 82066271 82349835 - MGP_129S1SvImJ_P0031191 Asic2 protein_coding protein_coding MGP_129S1SvImJ_T0029852.1 MGP_129S1SvImJ_G0018507.1 mouse_genomes_project 11 69283808 69287838 + MGP_129S1SvImJ_P0029852 protein_coding protein_coding MGP_129S1SvImJ_T0029853.1 MGP_129S1SvImJ_G0018507.1 mouse_genomes_project 11 69283835 69287814 + MGP_129S1SvImJ_P0029853 protein_coding protein_coding MGP_129S1SvImJ_T0029854.1 MGP_129S1SvImJ_G0018507.1 mouse_genomes_project 11 69283852 69286623 + MGP_129S1SvImJ_P0029854 protein_coding protein_coding MGP_129S1SvImJ_T0029855.1 MGP_129S1SvImJ_G0018507.1 mouse_genomes_project 11 69283860 69287837 + MGP_129S1SvImJ_P0029855 protein_coding protein_coding MGP_129S1SvImJ_T0029856.1 MGP_129S1SvImJ_G0018507.1 mouse_genomes_project 11 69286156 69287837 + protein_coding retained_intron MGP_129S1SvImJ_T0029857.1 MGP_129S1SvImJ_G0018507.1 mouse_genomes_project 11 69286537 69290281 + protein_coding processed_transcript MGP_129S1SvImJ_T0033598.1 MGP_129S1SvImJ_G0019412.1 mouse_genomes_project 11 120148618 120163913 - MGP_129S1SvImJ_P0033598 Unc13d protein_coding protein_coding MGP_129S1SvImJ_T0033599.1 MGP_129S1SvImJ_G0019412.1 mouse_genomes_project 11 120148619 120164124 - MGP_129S1SvImJ_P0033599 Unc13d protein_coding protein_coding MGP_129S1SvImJ_T0033600.1 MGP_129S1SvImJ_G0019412.1 mouse_genomes_project 11 120148619 120164124 - MGP_129S1SvImJ_P0033600 Unc13d protein_coding protein_coding MGP_129S1SvImJ_T0033601.1 MGP_129S1SvImJ_G0019412.1 mouse_genomes_project 11 120149077 120163787 - MGP_129S1SvImJ_P0033601 Unc13d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033602.1 MGP_129S1SvImJ_G0019412.1 mouse_genomes_project 11 120149161 120163753 - MGP_129S1SvImJ_P0033602 Unc13d protein_coding protein_coding MGP_129S1SvImJ_T0033603.1 MGP_129S1SvImJ_G0019412.1 mouse_genomes_project 11 120155311 120156872 - Unc13d protein_coding retained_intron MGP_129S1SvImJ_T0033604.1 MGP_129S1SvImJ_G0019412.1 mouse_genomes_project 11 120161717 120164124 - Unc13d protein_coding processed_transcript MGP_129S1SvImJ_T0033605.1 MGP_129S1SvImJ_G0019412.1 mouse_genomes_project 11 120162270 120163214 - MGP_129S1SvImJ_P0033605 Unc13d protein_coding protein_coding MGP_129S1SvImJ_T0033606.1 MGP_129S1SvImJ_G0019412.1 mouse_genomes_project 11 120162633 120164104 - MGP_129S1SvImJ_P0033606 Unc13d protein_coding protein_coding MGP_129S1SvImJ_T0028298.1 MGP_129S1SvImJ_G0018095.1 mouse_genomes_project 11 21869301 21967762 + MGP_129S1SvImJ_P0028298 Bcl11a protein_coding protein_coding MGP_129S1SvImJ_T0028299.1 MGP_129S1SvImJ_G0018095.1 mouse_genomes_project 11 21869362 21968691 + MGP_129S1SvImJ_P0028299 Bcl11a protein_coding protein_coding MGP_129S1SvImJ_T0028300.1 MGP_129S1SvImJ_G0018095.1 mouse_genomes_project 11 21869392 21883333 + Bcl11a protein_coding retained_intron MGP_129S1SvImJ_T0028301.1 MGP_129S1SvImJ_G0018095.1 mouse_genomes_project 11 21869418 21963021 + MGP_129S1SvImJ_P0028301 Bcl11a protein_coding protein_coding MGP_129S1SvImJ_T0028302.1 MGP_129S1SvImJ_G0018095.1 mouse_genomes_project 11 21871915 21968126 + MGP_129S1SvImJ_P0028302 Bcl11a protein_coding protein_coding MGP_129S1SvImJ_T0028303.1 MGP_129S1SvImJ_G0018095.1 mouse_genomes_project 11 21936974 21957883 + Bcl11a protein_coding processed_transcript MGP_129S1SvImJ_T0012712.1 MGP_129S1SvImJ_G0010801.1 mouse_genomes_project 11 85185329 85185955 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029710.1 MGP_129S1SvImJ_G0018469.1 mouse_genomes_project 11 64015771 64056236 - MGP_129S1SvImJ_P0029710 Hs3st3b1 protein_coding protein_coding MGP_129S1SvImJ_T0102136.1 MGP_129S1SvImJ_G0039971.1 mouse_genomes_project 11 58743628 58744039 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0033957.1 MGP_129S1SvImJ_G0019483.1 mouse_genomes_project 11 123897491 123915662 + MGP_129S1SvImJ_P0033957 Endov protein_coding protein_coding MGP_129S1SvImJ_T0033958.1 MGP_129S1SvImJ_G0019483.1 mouse_genomes_project 11 123897494 123915926 + MGP_129S1SvImJ_P0033958 Endov protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033959.1 MGP_129S1SvImJ_G0019483.1 mouse_genomes_project 11 123897495 123917814 + MGP_129S1SvImJ_P0033959 Endov protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033960.1 MGP_129S1SvImJ_G0019483.1 mouse_genomes_project 11 123897546 123915614 + MGP_129S1SvImJ_P0033960 Endov protein_coding protein_coding MGP_129S1SvImJ_T0033961.1 MGP_129S1SvImJ_G0019483.1 mouse_genomes_project 11 123897671 123911237 + MGP_129S1SvImJ_P0033961 Endov protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033962.1 MGP_129S1SvImJ_G0019483.1 mouse_genomes_project 11 123897796 123906933 + Endov protein_coding retained_intron MGP_129S1SvImJ_T0033963.1 MGP_129S1SvImJ_G0019483.1 mouse_genomes_project 11 123897905 123908943 + Endov protein_coding processed_transcript MGP_129S1SvImJ_T0033964.1 MGP_129S1SvImJ_G0019483.1 mouse_genomes_project 11 123905626 123911854 + MGP_129S1SvImJ_P0033964 Endov protein_coding protein_coding MGP_129S1SvImJ_T0033965.1 MGP_129S1SvImJ_G0019483.1 mouse_genomes_project 11 123908093 123915624 + Endov protein_coding retained_intron MGP_129S1SvImJ_T0030080.1 MGP_129S1SvImJ_G0018560.1 mouse_genomes_project 11 70321704 70322804 + MGP_129S1SvImJ_P0030080 Tmem256 protein_coding protein_coding MGP_129S1SvImJ_T0030081.1 MGP_129S1SvImJ_G0018560.1 mouse_genomes_project 11 70321714 70322809 + MGP_129S1SvImJ_P0030081 Tmem256 protein_coding protein_coding MGP_129S1SvImJ_T0030082.1 MGP_129S1SvImJ_G0018560.1 mouse_genomes_project 11 70321745 70322638 + Tmem256 protein_coding processed_transcript MGP_129S1SvImJ_T0030083.1 MGP_129S1SvImJ_G0018560.1 mouse_genomes_project 11 70321753 70322803 + Tmem256 protein_coding processed_transcript MGP_129S1SvImJ_T0030084.1 MGP_129S1SvImJ_G0018560.1 mouse_genomes_project 11 70321828 70322764 + Tmem256 protein_coding processed_transcript MGP_129S1SvImJ_T0027749.1 MGP_129S1SvImJ_G0017969.1 mouse_genomes_project 11 875803 891814 + MGP_129S1SvImJ_P0027749 Pes1 protein_coding protein_coding MGP_129S1SvImJ_T0027750.1 MGP_129S1SvImJ_G0017969.1 mouse_genomes_project 11 875803 891814 + MGP_129S1SvImJ_P0027750 Pes1 protein_coding protein_coding MGP_129S1SvImJ_T0027751.1 MGP_129S1SvImJ_G0017969.1 mouse_genomes_project 11 875837 882614 + Pes1 protein_coding processed_transcript MGP_129S1SvImJ_T0027752.1 MGP_129S1SvImJ_G0017969.1 mouse_genomes_project 11 875877 888796 + Pes1 protein_coding processed_transcript MGP_129S1SvImJ_T0030441.1 MGP_129S1SvImJ_G0018626.1 mouse_genomes_project 11 72348254 72358431 + MGP_129S1SvImJ_P0030441 Wscd1 protein_coding protein_coding MGP_129S1SvImJ_T0030442.1 MGP_129S1SvImJ_G0018626.1 mouse_genomes_project 11 72349019 72387960 + MGP_129S1SvImJ_P0030442 Wscd1 protein_coding protein_coding MGP_129S1SvImJ_T0030443.1 MGP_129S1SvImJ_G0018626.1 mouse_genomes_project 11 72349314 72387960 + MGP_129S1SvImJ_P0030443 Wscd1 protein_coding protein_coding MGP_129S1SvImJ_T0030444.1 MGP_129S1SvImJ_G0018626.1 mouse_genomes_project 11 72349710 72359287 + Wscd1 protein_coding retained_intron MGP_129S1SvImJ_T0030445.1 MGP_129S1SvImJ_G0018626.1 mouse_genomes_project 11 72349710 72387960 + MGP_129S1SvImJ_P0030445 Wscd1 protein_coding protein_coding MGP_129S1SvImJ_T0030446.1 MGP_129S1SvImJ_G0018626.1 mouse_genomes_project 11 72366994 72383598 + Wscd1 protein_coding processed_transcript MGP_129S1SvImJ_T0012602.1 MGP_129S1SvImJ_G0010691.1 mouse_genomes_project 11 47771047 47773850 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029688.1 MGP_129S1SvImJ_G0018463.1 mouse_genomes_project 11 62902794 62930413 + MGP_129S1SvImJ_P0029688 Trim16 protein_coding protein_coding MGP_129S1SvImJ_T0029689.1 MGP_129S1SvImJ_G0018463.1 mouse_genomes_project 11 62902816 62940773 + MGP_129S1SvImJ_P0029689 Trim16 protein_coding protein_coding MGP_129S1SvImJ_T0029690.1 MGP_129S1SvImJ_G0018463.1 mouse_genomes_project 11 62903003 62903812 + Trim16 protein_coding processed_transcript MGP_129S1SvImJ_T0029691.1 MGP_129S1SvImJ_G0018463.1 mouse_genomes_project 11 62903032 62930413 + MGP_129S1SvImJ_P0029691 Trim16 protein_coding protein_coding MGP_129S1SvImJ_T0029692.1 MGP_129S1SvImJ_G0018463.1 mouse_genomes_project 11 62921221 62928886 + Trim16 protein_coding processed_transcript MGP_129S1SvImJ_T0003246.1 MGP_129S1SvImJ_G0003008.1 mouse_genomes_project 11 75763558 75766431 - Gm12333 antisense antisense MGP_129S1SvImJ_T0032687.1 MGP_129S1SvImJ_G0019226.1 mouse_genomes_project 11 105147104 105182875 - MGP_129S1SvImJ_P0032687 Hdac5 protein_coding protein_coding MGP_129S1SvImJ_T0032688.1 MGP_129S1SvImJ_G0019226.1 mouse_genomes_project 11 105148416 105182833 - MGP_129S1SvImJ_P0032688 Hdac5 protein_coding protein_coding MGP_129S1SvImJ_T0032689.1 MGP_129S1SvImJ_G0019226.1 mouse_genomes_project 11 105148419 105149858 - Hdac5 protein_coding retained_intron MGP_129S1SvImJ_T0032690.1 MGP_129S1SvImJ_G0019226.1 mouse_genomes_project 11 105148421 105150541 - Hdac5 protein_coding retained_intron MGP_129S1SvImJ_T0032691.1 MGP_129S1SvImJ_G0019226.1 mouse_genomes_project 11 105148421 105171604 - Hdac5 protein_coding retained_intron MGP_129S1SvImJ_T0032692.1 MGP_129S1SvImJ_G0019226.1 mouse_genomes_project 11 105148421 105149231 - Hdac5 protein_coding retained_intron MGP_129S1SvImJ_T0032693.1 MGP_129S1SvImJ_G0019226.1 mouse_genomes_project 11 105148421 105149241 - MGP_129S1SvImJ_P0032693 Hdac5 protein_coding protein_coding MGP_129S1SvImJ_T0032694.1 MGP_129S1SvImJ_G0019226.1 mouse_genomes_project 11 105148421 105182848 - MGP_129S1SvImJ_P0032694 Hdac5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032695.1 MGP_129S1SvImJ_G0019226.1 mouse_genomes_project 11 105148423 105182845 - MGP_129S1SvImJ_P0032695 Hdac5 protein_coding protein_coding MGP_129S1SvImJ_T0032696.1 MGP_129S1SvImJ_G0019226.1 mouse_genomes_project 11 105148423 105182875 - MGP_129S1SvImJ_P0032696 Hdac5 protein_coding protein_coding MGP_129S1SvImJ_T0032697.1 MGP_129S1SvImJ_G0019226.1 mouse_genomes_project 11 105148909 105150752 - Hdac5 protein_coding retained_intron MGP_129S1SvImJ_T0032698.1 MGP_129S1SvImJ_G0019226.1 mouse_genomes_project 11 105149353 105151568 - Hdac5 protein_coding retained_intron MGP_129S1SvImJ_T0032699.1 MGP_129S1SvImJ_G0019226.1 mouse_genomes_project 11 105151351 105152166 - Hdac5 protein_coding retained_intron MGP_129S1SvImJ_T0032700.1 MGP_129S1SvImJ_G0019226.1 mouse_genomes_project 11 105151636 105153030 - Hdac5 protein_coding retained_intron MGP_129S1SvImJ_T0032701.1 MGP_129S1SvImJ_G0019226.1 mouse_genomes_project 11 105152062 105153489 - Hdac5 protein_coding retained_intron MGP_129S1SvImJ_T0032702.1 MGP_129S1SvImJ_G0019226.1 mouse_genomes_project 11 105158562 105182851 - MGP_129S1SvImJ_P0032702 Hdac5 protein_coding protein_coding MGP_129S1SvImJ_T0032703.1 MGP_129S1SvImJ_G0019226.1 mouse_genomes_project 11 105159303 105171603 - MGP_129S1SvImJ_P0032703 Hdac5 protein_coding protein_coding MGP_129S1SvImJ_T0032704.1 MGP_129S1SvImJ_G0019226.1 mouse_genomes_project 11 105159679 105171604 - Hdac5 protein_coding retained_intron MGP_129S1SvImJ_T0032705.1 MGP_129S1SvImJ_G0019226.1 mouse_genomes_project 11 105171385 105182842 - Hdac5 protein_coding processed_transcript MGP_129S1SvImJ_T0032706.1 MGP_129S1SvImJ_G0019226.1 mouse_genomes_project 11 105171827 105182855 - Hdac5 protein_coding processed_transcript MGP_129S1SvImJ_T0006198.1 MGP_129S1SvImJ_G0005177.1 mouse_genomes_project 11 17637382 17639282 - lincRNA lincRNA MGP_129S1SvImJ_T0012486.1 MGP_129S1SvImJ_G0010575.1 mouse_genomes_project 11 3837088 3838074 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012517.1 MGP_129S1SvImJ_G0010606.1 mouse_genomes_project 11 16016132 16017378 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029777.1 MGP_129S1SvImJ_G0018489.1 mouse_genomes_project 11 67574681 67611560 + MGP_129S1SvImJ_P0029777 Myh8 protein_coding protein_coding MGP_129S1SvImJ_T0029778.1 MGP_129S1SvImJ_G0018489.1 mouse_genomes_project 11 67574772 67611409 + MGP_129S1SvImJ_P0029778 Myh8 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0029779.1 MGP_129S1SvImJ_G0018489.1 mouse_genomes_project 11 67574975 67593448 + Myh8 protein_coding retained_intron MGP_129S1SvImJ_T0029780.1 MGP_129S1SvImJ_G0018489.1 mouse_genomes_project 11 67574975 67579678 + MGP_129S1SvImJ_P0029780 Myh8 protein_coding protein_coding MGP_129S1SvImJ_T0029781.1 MGP_129S1SvImJ_G0018489.1 mouse_genomes_project 11 67577544 67590381 + Myh8 protein_coding retained_intron MGP_129S1SvImJ_T0033326.1 MGP_129S1SvImJ_G0019358.1 mouse_genomes_project 11 118658608 118684248 + Dnaic2 protein_coding processed_transcript MGP_129S1SvImJ_T0033327.1 MGP_129S1SvImJ_G0019358.1 mouse_genomes_project 11 118658612 118696957 + MGP_129S1SvImJ_P0033327 Dnaic2 protein_coding protein_coding MGP_129S1SvImJ_T0033328.1 MGP_129S1SvImJ_G0019358.1 mouse_genomes_project 11 118658616 118693424 + Dnaic2 protein_coding processed_transcript MGP_129S1SvImJ_T0033329.1 MGP_129S1SvImJ_G0019358.1 mouse_genomes_project 11 118660334 118696957 + MGP_129S1SvImJ_P0033329 Dnaic2 protein_coding protein_coding MGP_129S1SvImJ_T0033330.1 MGP_129S1SvImJ_G0019358.1 mouse_genomes_project 11 118665520 118693534 + MGP_129S1SvImJ_P0033330 Dnaic2 protein_coding protein_coding MGP_129S1SvImJ_T0033331.1 MGP_129S1SvImJ_G0019358.1 mouse_genomes_project 11 118665538 118696339 + MGP_129S1SvImJ_P0033331 Dnaic2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0033332.1 MGP_129S1SvImJ_G0019358.1 mouse_genomes_project 11 118671858 118693141 + Dnaic2 protein_coding processed_transcript MGP_129S1SvImJ_T0033333.1 MGP_129S1SvImJ_G0019358.1 mouse_genomes_project 11 118691747 118696230 + Dnaic2 protein_coding processed_transcript MGP_129S1SvImJ_T0033059.1 MGP_129S1SvImJ_G0019301.1 mouse_genomes_project 11 109553263 109557884 - MGP_129S1SvImJ_P0033059 Smarcd2 protein_coding protein_coding MGP_129S1SvImJ_T0033060.1 MGP_129S1SvImJ_G0019301.1 mouse_genomes_project 11 109553263 109563012 - MGP_129S1SvImJ_P0033060 Smarcd2 protein_coding protein_coding MGP_129S1SvImJ_T0033061.1 MGP_129S1SvImJ_G0019301.1 mouse_genomes_project 11 109553798 109555747 - Smarcd2 protein_coding retained_intron MGP_129S1SvImJ_T0033062.1 MGP_129S1SvImJ_G0019301.1 mouse_genomes_project 11 109553883 109555021 - Smarcd2 protein_coding retained_intron MGP_129S1SvImJ_T0033063.1 MGP_129S1SvImJ_G0019301.1 mouse_genomes_project 11 109554103 109555831 - MGP_129S1SvImJ_P0033063 Smarcd2 protein_coding protein_coding MGP_129S1SvImJ_T0033064.1 MGP_129S1SvImJ_G0019301.1 mouse_genomes_project 11 109554817 109556156 - Smarcd2 protein_coding retained_intron MGP_129S1SvImJ_T0033065.1 MGP_129S1SvImJ_G0019301.1 mouse_genomes_project 11 109555396 109563005 - Smarcd2 protein_coding processed_transcript MGP_129S1SvImJ_T0033066.1 MGP_129S1SvImJ_G0019301.1 mouse_genomes_project 11 109555823 109557568 - Smarcd2 protein_coding processed_transcript MGP_129S1SvImJ_T0033067.1 MGP_129S1SvImJ_G0019301.1 mouse_genomes_project 11 109556975 109557613 - Smarcd2 protein_coding retained_intron MGP_129S1SvImJ_T0027910.1 MGP_129S1SvImJ_G0018003.1 mouse_genomes_project 11 2633207 2763196 + MGP_129S1SvImJ_P0027910 Ankrd36 protein_coding protein_coding MGP_129S1SvImJ_T0027911.1 MGP_129S1SvImJ_G0018003.1 mouse_genomes_project 11 2633220 2647840 + MGP_129S1SvImJ_P0027911 Ankrd36 protein_coding protein_coding MGP_129S1SvImJ_T0027912.1 MGP_129S1SvImJ_G0018003.1 mouse_genomes_project 11 2633340 2724842 + MGP_129S1SvImJ_P0027912 Ankrd36 protein_coding protein_coding MGP_129S1SvImJ_T0027913.1 MGP_129S1SvImJ_G0018003.1 mouse_genomes_project 11 2637594 2647690 + Ankrd36 protein_coding processed_transcript MGP_129S1SvImJ_T0027914.1 MGP_129S1SvImJ_G0018003.1 mouse_genomes_project 11 2692696 2710158 + MGP_129S1SvImJ_P0027914 Ankrd36 protein_coding protein_coding MGP_129S1SvImJ_T0012605.1 MGP_129S1SvImJ_G0010694.1 mouse_genomes_project 11 48838620 48839107 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012723.1 MGP_129S1SvImJ_G0010812.1 mouse_genomes_project 11 90044119 90044444 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0027705.1 MGP_129S1SvImJ_G0017959.1 mouse_genomes_project 11 366874 377325 - MGP_129S1SvImJ_P0027705 Inpp5j protein_coding protein_coding MGP_129S1SvImJ_T0027706.1 MGP_129S1SvImJ_G0017959.1 mouse_genomes_project 11 366881 377275 - MGP_129S1SvImJ_P0027706 Inpp5j protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027707.1 MGP_129S1SvImJ_G0017959.1 mouse_genomes_project 11 366881 377278 - MGP_129S1SvImJ_P0027707 Inpp5j protein_coding non_stop_decay MGP_129S1SvImJ_T0027708.1 MGP_129S1SvImJ_G0017959.1 mouse_genomes_project 11 366881 374638 - MGP_129S1SvImJ_P0027708 Inpp5j protein_coding protein_coding MGP_129S1SvImJ_T0027709.1 MGP_129S1SvImJ_G0017959.1 mouse_genomes_project 11 367046 377290 - MGP_129S1SvImJ_P0027709 Inpp5j protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027710.1 MGP_129S1SvImJ_G0017959.1 mouse_genomes_project 11 371457 377303 - MGP_129S1SvImJ_P0027710 Inpp5j protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027711.1 MGP_129S1SvImJ_G0017959.1 mouse_genomes_project 11 372074 378015 - MGP_129S1SvImJ_P0027711 Inpp5j protein_coding unknown_likely_coding MGP_129S1SvImJ_T0012572.1 MGP_129S1SvImJ_G0010661.1 mouse_genomes_project 11 31136907 31137486 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029835.1 MGP_129S1SvImJ_G0018504.1 mouse_genomes_project 11 69058859 69066565 + Myh10 protein_coding processed_transcript MGP_129S1SvImJ_T0029836.1 MGP_129S1SvImJ_G0018504.1 mouse_genomes_project 11 69059215 69189956 + MGP_129S1SvImJ_P0029836 Myh10 protein_coding protein_coding MGP_129S1SvImJ_T0029837.1 MGP_129S1SvImJ_G0018504.1 mouse_genomes_project 11 69059378 69066724 + Myh10 protein_coding processed_transcript MGP_129S1SvImJ_T0029838.1 MGP_129S1SvImJ_G0018504.1 mouse_genomes_project 11 69059381 69116998 + MGP_129S1SvImJ_P0029838 Myh10 protein_coding protein_coding MGP_129S1SvImJ_T0029839.1 MGP_129S1SvImJ_G0018504.1 mouse_genomes_project 11 69059412 69189936 + MGP_129S1SvImJ_P0029839 Myh10 protein_coding protein_coding MGP_129S1SvImJ_T0029840.1 MGP_129S1SvImJ_G0018504.1 mouse_genomes_project 11 69059454 69140210 + Myh10 protein_coding retained_intron MGP_129S1SvImJ_T0029841.1 MGP_129S1SvImJ_G0018504.1 mouse_genomes_project 11 69059616 69189948 + MGP_129S1SvImJ_P0029841 Myh10 protein_coding protein_coding MGP_129S1SvImJ_T0029842.1 MGP_129S1SvImJ_G0018504.1 mouse_genomes_project 11 69153977 69160687 + Myh10 protein_coding processed_transcript MGP_129S1SvImJ_T0029843.1 MGP_129S1SvImJ_G0018504.1 mouse_genomes_project 11 69184738 69186330 + Myh10 protein_coding processed_transcript MGP_129S1SvImJ_T0029844.1 MGP_129S1SvImJ_G0018504.1 mouse_genomes_project 11 69187679 69189868 + Myh10 protein_coding processed_transcript MGP_129S1SvImJ_T0033711.1 MGP_129S1SvImJ_G0019431.1 mouse_genomes_project 11 120672430 120678709 - Ube2o protein_coding processed_transcript MGP_129S1SvImJ_T0033712.1 MGP_129S1SvImJ_G0019431.1 mouse_genomes_project 11 120672430 120714903 - MGP_129S1SvImJ_P0033712 Ube2o protein_coding protein_coding MGP_129S1SvImJ_T0033713.1 MGP_129S1SvImJ_G0019431.1 mouse_genomes_project 11 120680395 120683502 - Ube2o protein_coding processed_transcript MGP_129S1SvImJ_T0032838.1 MGP_129S1SvImJ_G0019247.1 mouse_genomes_project 11 105911790 105915791 + MGP_129S1SvImJ_P0032838 Ccdc103 protein_coding protein_coding MGP_129S1SvImJ_T0032839.1 MGP_129S1SvImJ_G0019247.1 mouse_genomes_project 11 105911831 105915104 + MGP_129S1SvImJ_P0032839 Ccdc103 protein_coding protein_coding MGP_129S1SvImJ_T0099277.1 MGP_129S1SvImJ_G0037344.1 mouse_genomes_project 11 97095728 97095853 + Gm22456 snRNA snRNA MGP_129S1SvImJ_T0030141.1 MGP_129S1SvImJ_G0018570.1 mouse_genomes_project 11 70424682 70429633 + MGP_129S1SvImJ_P0030141 Ybx2 protein_coding protein_coding MGP_129S1SvImJ_T0030142.1 MGP_129S1SvImJ_G0018570.1 mouse_genomes_project 11 70425034 70430134 + MGP_129S1SvImJ_P0030142 Ybx2 protein_coding protein_coding MGP_129S1SvImJ_T0030143.1 MGP_129S1SvImJ_G0018570.1 mouse_genomes_project 11 70428383 70429199 + Ybx2 protein_coding retained_intron MGP_129S1SvImJ_T0030144.1 MGP_129S1SvImJ_G0018570.1 mouse_genomes_project 11 70429080 70430132 + Ybx2 protein_coding retained_intron MGP_129S1SvImJ_T0029091.1 MGP_129S1SvImJ_G0018308.1 mouse_genomes_project 11 53404902 53428905 - MGP_129S1SvImJ_P0029091 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029092.1 MGP_129S1SvImJ_G0018308.1 mouse_genomes_project 11 53404994 53418644 - MGP_129S1SvImJ_P0029092 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0003374.1 MGP_129S1SvImJ_G0003109.1 mouse_genomes_project 11 122158161 122179264 + Gm11725 antisense antisense MGP_129S1SvImJ_T0102134.1 MGP_129S1SvImJ_G0039969.1 mouse_genomes_project 11 58206430 58207370 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0003224.1 MGP_129S1SvImJ_G0002991.1 mouse_genomes_project 11 64103545 64107360 + 9630013K17Rik antisense antisense MGP_129S1SvImJ_T0031454.1 MGP_129S1SvImJ_G0018891.1 mouse_genomes_project 11 88106630 88132307 + MGP_129S1SvImJ_P0031454 Tubd1 protein_coding protein_coding MGP_129S1SvImJ_T0031455.1 MGP_129S1SvImJ_G0018891.1 mouse_genomes_project 11 88106630 88132308 + MGP_129S1SvImJ_P0031455 Tubd1 protein_coding protein_coding MGP_129S1SvImJ_T0031456.1 MGP_129S1SvImJ_G0018891.1 mouse_genomes_project 11 88106630 88132308 + MGP_129S1SvImJ_P0031456 Tubd1 protein_coding protein_coding MGP_129S1SvImJ_T0031457.1 MGP_129S1SvImJ_G0018891.1 mouse_genomes_project 11 88106630 88132308 + MGP_129S1SvImJ_P0031457 Tubd1 protein_coding protein_coding MGP_129S1SvImJ_T0031458.1 MGP_129S1SvImJ_G0018891.1 mouse_genomes_project 11 88120239 88132308 + MGP_129S1SvImJ_P0031458 Tubd1 protein_coding protein_coding MGP_129S1SvImJ_T0032921.1 MGP_129S1SvImJ_G0019269.1 mouse_genomes_project 11 106882072 106925825 + MGP_129S1SvImJ_P0032921 Wnt3 protein_coding protein_coding MGP_129S1SvImJ_T0028853.1 MGP_129S1SvImJ_G0018245.1 mouse_genomes_project 11 49405079 49407082 - MGP_129S1SvImJ_P0028853 protein_coding protein_coding MGP_129S1SvImJ_T0028854.1 MGP_129S1SvImJ_G0018245.1 mouse_genomes_project 11 49405082 49407143 - MGP_129S1SvImJ_P0028854 protein_coding protein_coding MGP_129S1SvImJ_T0028855.1 MGP_129S1SvImJ_G0018245.1 mouse_genomes_project 11 49405082 49407227 - MGP_129S1SvImJ_P0028855 protein_coding protein_coding MGP_129S1SvImJ_T0011816.1 MGP_129S1SvImJ_G0009929.1 mouse_genomes_project 11 74135826 74136760 - MGP_129S1SvImJ_P0011816 Olfr379-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0006258.1 MGP_129S1SvImJ_G0005229.1 mouse_genomes_project 11 57197677 57199777 + Gm12243 lincRNA lincRNA MGP_129S1SvImJ_T0100471.1 MGP_129S1SvImJ_G0038538.1 mouse_genomes_project 11 682676 682775 + Gm24013 snoRNA snoRNA MGP_129S1SvImJ_T0006298.1 MGP_129S1SvImJ_G0005262.1 mouse_genomes_project 11 78868426 78887014 - Gm11190 lincRNA lincRNA MGP_129S1SvImJ_T0034195.1 MGP_129S1SvImJ_G0019526.1 mouse_genomes_project 11 125216243 125220464 - MGP_129S1SvImJ_P0034195 Cbr2 protein_coding protein_coding MGP_129S1SvImJ_T0034196.1 MGP_129S1SvImJ_G0019526.1 mouse_genomes_project 11 125216258 125216860 - Cbr2 protein_coding retained_intron MGP_129S1SvImJ_T0034197.1 MGP_129S1SvImJ_G0019526.1 mouse_genomes_project 11 125216533 125220294 - MGP_129S1SvImJ_P0034197 Cbr2 protein_coding protein_coding MGP_129S1SvImJ_T0034198.1 MGP_129S1SvImJ_G0019526.1 mouse_genomes_project 11 125216867 125220302 - Cbr2 protein_coding retained_intron MGP_129S1SvImJ_T0011326.1 MGP_129S1SvImJ_G0009442.1 mouse_genomes_project 11 85230426 85230734 + Gm23211 misc_RNA misc_RNA MGP_129S1SvImJ_T0031867.1 MGP_129S1SvImJ_G0018993.1 mouse_genomes_project 11 98224167 98275238 - MGP_129S1SvImJ_P0031867 Igf2bp1 protein_coding protein_coding MGP_129S1SvImJ_T0031868.1 MGP_129S1SvImJ_G0018993.1 mouse_genomes_project 11 98230440 98234830 - Igf2bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0031869.1 MGP_129S1SvImJ_G0018993.1 mouse_genomes_project 11 98239934 98251021 - Igf2bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0031870.1 MGP_129S1SvImJ_G0018993.1 mouse_genomes_project 11 98240769 98251038 - Igf2bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0031871.1 MGP_129S1SvImJ_G0018993.1 mouse_genomes_project 11 98246808 98251035 - Igf2bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0029598.1 MGP_129S1SvImJ_G0018448.1 mouse_genomes_project 11 61853190 61917406 - MGP_129S1SvImJ_P0029598 Akap10 protein_coding protein_coding MGP_129S1SvImJ_T0029599.1 MGP_129S1SvImJ_G0018448.1 mouse_genomes_project 11 61856709 61917439 - MGP_129S1SvImJ_P0029599 Akap10 protein_coding protein_coding MGP_129S1SvImJ_T0029600.1 MGP_129S1SvImJ_G0018448.1 mouse_genomes_project 11 61856895 61864457 - Akap10 protein_coding processed_transcript MGP_129S1SvImJ_T0029601.1 MGP_129S1SvImJ_G0018448.1 mouse_genomes_project 11 61877770 61917413 - MGP_129S1SvImJ_P0029601 Akap10 protein_coding protein_coding MGP_129S1SvImJ_T0029602.1 MGP_129S1SvImJ_G0018448.1 mouse_genomes_project 11 61907938 61917394 - Akap10 protein_coding processed_transcript MGP_129S1SvImJ_T0017198.1 MGP_129S1SvImJ_G0015156.1 mouse_genomes_project 11 18971383 18975135 + Gm12043 processed_transcript processed_transcript MGP_129S1SvImJ_T0029305.1 MGP_129S1SvImJ_G0018381.1 mouse_genomes_project 11 58697080 58705697 + MGP_129S1SvImJ_P0029305 protein_coding protein_coding MGP_129S1SvImJ_T0029306.1 MGP_129S1SvImJ_G0018381.1 mouse_genomes_project 11 58697126 58706240 + MGP_129S1SvImJ_P0029306 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029307.1 MGP_129S1SvImJ_G0018381.1 mouse_genomes_project 11 58697231 58706047 + MGP_129S1SvImJ_P0029307 protein_coding protein_coding MGP_129S1SvImJ_T0029308.1 MGP_129S1SvImJ_G0018381.1 mouse_genomes_project 11 58697231 58706047 + MGP_129S1SvImJ_P0029308 protein_coding protein_coding MGP_129S1SvImJ_T0012722.1 MGP_129S1SvImJ_G0010811.1 mouse_genomes_project 11 89605523 89605935 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006234.1 MGP_129S1SvImJ_G0005207.1 mouse_genomes_project 11 33233927 33236120 + Gm12711 lincRNA lincRNA MGP_129S1SvImJ_T0029464.1 MGP_129S1SvImJ_G0018420.1 mouse_genomes_project 11 60422549 60440477 + Alkbh5 protein_coding processed_transcript MGP_129S1SvImJ_T0029465.1 MGP_129S1SvImJ_G0018420.1 mouse_genomes_project 11 60424146 60444570 + MGP_129S1SvImJ_P0029465 Alkbh5 protein_coding protein_coding MGP_129S1SvImJ_T0003360.1 MGP_129S1SvImJ_G0003099.1 mouse_genomes_project 11 119485507 119486917 - Gm11695 antisense antisense MGP_129S1SvImJ_T0006359.1 MGP_129S1SvImJ_G0005302.1 mouse_genomes_project 11 110319168 110320194 - Gm11707 lincRNA lincRNA MGP_129S1SvImJ_T0098298.1 MGP_129S1SvImJ_G0036383.1 mouse_genomes_project 11 43468713 43469169 + pseudogene pseudogene MGP_129S1SvImJ_T0009671.1 MGP_129S1SvImJ_G0007787.1 mouse_genomes_project 11 24055493 24055602 + Mir6372 miRNA miRNA MGP_129S1SvImJ_T0030716.1 MGP_129S1SvImJ_G0018713.1 mouse_genomes_project 11 76208790 76216727 + Tlcd2 protein_coding processed_transcript MGP_129S1SvImJ_T0030717.1 MGP_129S1SvImJ_G0018713.1 mouse_genomes_project 11 76215142 76217636 + MGP_129S1SvImJ_P0030717 Tlcd2 protein_coding protein_coding MGP_129S1SvImJ_T0030718.1 MGP_129S1SvImJ_G0018713.1 mouse_genomes_project 11 76215142 76217878 + MGP_129S1SvImJ_P0030718 Tlcd2 protein_coding protein_coding MGP_129S1SvImJ_T0028609.1 MGP_129S1SvImJ_G0018171.1 mouse_genomes_project 11 42176811 42186264 - MGP_129S1SvImJ_P0028609 Pttg1 protein_coding protein_coding MGP_129S1SvImJ_T0028610.1 MGP_129S1SvImJ_G0018171.1 mouse_genomes_project 11 42176825 42185987 - MGP_129S1SvImJ_P0028610 Pttg1 protein_coding protein_coding MGP_129S1SvImJ_T0028611.1 MGP_129S1SvImJ_G0018171.1 mouse_genomes_project 11 42176826 42182986 - MGP_129S1SvImJ_P0028611 Pttg1 protein_coding protein_coding MGP_129S1SvImJ_T0028612.1 MGP_129S1SvImJ_G0018171.1 mouse_genomes_project 11 42176830 42186208 - MGP_129S1SvImJ_P0028612 Pttg1 protein_coding protein_coding MGP_129S1SvImJ_T0028613.1 MGP_129S1SvImJ_G0018171.1 mouse_genomes_project 11 42176834 42186223 - MGP_129S1SvImJ_P0028613 Pttg1 protein_coding protein_coding MGP_129S1SvImJ_T0028614.1 MGP_129S1SvImJ_G0018171.1 mouse_genomes_project 11 42176835 42185969 - MGP_129S1SvImJ_P0028614 Pttg1 protein_coding protein_coding MGP_129S1SvImJ_T0028615.1 MGP_129S1SvImJ_G0018171.1 mouse_genomes_project 11 42176839 42185987 - MGP_129S1SvImJ_P0028615 Pttg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028616.1 MGP_129S1SvImJ_G0018171.1 mouse_genomes_project 11 42177592 42186233 - MGP_129S1SvImJ_P0028616 Pttg1 protein_coding protein_coding MGP_129S1SvImJ_T0028617.1 MGP_129S1SvImJ_G0018171.1 mouse_genomes_project 11 42182914 42186124 - Pttg1 protein_coding processed_transcript MGP_129S1SvImJ_T0028618.1 MGP_129S1SvImJ_G0018171.1 mouse_genomes_project 11 42184627 42186219 - Pttg1 protein_coding retained_intron MGP_129S1SvImJ_T0028680.1 MGP_129S1SvImJ_G0018190.1 mouse_genomes_project 11 45101483 45225067 - MGP_129S1SvImJ_P0028680 Cyfip2 protein_coding protein_coding MGP_129S1SvImJ_T0028681.1 MGP_129S1SvImJ_G0018190.1 mouse_genomes_project 11 45101483 45224566 - MGP_129S1SvImJ_P0028681 Cyfip2 protein_coding protein_coding MGP_129S1SvImJ_T0028682.1 MGP_129S1SvImJ_G0018190.1 mouse_genomes_project 11 45101488 45224502 - MGP_129S1SvImJ_P0028682 Cyfip2 protein_coding protein_coding MGP_129S1SvImJ_T0028683.1 MGP_129S1SvImJ_G0018190.1 mouse_genomes_project 11 45103704 45178827 - MGP_129S1SvImJ_P0028683 Cyfip2 protein_coding protein_coding MGP_129S1SvImJ_T0028685.1 MGP_129S1SvImJ_G0018190.1 mouse_genomes_project 11 45200700 45224428 - MGP_129S1SvImJ_P0028685 Cyfip2 protein_coding protein_coding MGP_129S1SvImJ_T0012748.1 MGP_129S1SvImJ_G0010837.1 mouse_genomes_project 11 102425636 102425789 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003309.1 MGP_129S1SvImJ_G0003057.1 mouse_genomes_project 11 102082307 102083086 + A830036E02Rik antisense antisense MGP_129S1SvImJ_T0003310.1 MGP_129S1SvImJ_G0003057.1 mouse_genomes_project 11 102082594 102088432 + A830036E02Rik antisense antisense MGP_129S1SvImJ_T0003311.1 MGP_129S1SvImJ_G0003057.1 mouse_genomes_project 11 102082599 102083629 + A830036E02Rik antisense antisense MGP_129S1SvImJ_T0003312.1 MGP_129S1SvImJ_G0003057.1 mouse_genomes_project 11 102085314 102090831 + A830036E02Rik antisense antisense MGP_129S1SvImJ_T0031536.1 MGP_129S1SvImJ_G0018911.1 mouse_genomes_project 11 89392774 89418614 + MGP_129S1SvImJ_P0031536 Bzrap1 protein_coding protein_coding MGP_129S1SvImJ_T0031537.1 MGP_129S1SvImJ_G0018911.1 mouse_genomes_project 11 89392820 89418614 + MGP_129S1SvImJ_P0031537 Bzrap1 protein_coding protein_coding MGP_129S1SvImJ_T0031538.1 MGP_129S1SvImJ_G0018911.1 mouse_genomes_project 11 89397446 89399111 + Bzrap1 protein_coding processed_transcript MGP_129S1SvImJ_T0031539.1 MGP_129S1SvImJ_G0018911.1 mouse_genomes_project 11 89408795 89412204 + MGP_129S1SvImJ_P0031539 Bzrap1 protein_coding protein_coding MGP_129S1SvImJ_T0031540.1 MGP_129S1SvImJ_G0018911.1 mouse_genomes_project 11 89409202 89418614 + MGP_129S1SvImJ_P0031540 Bzrap1 protein_coding protein_coding MGP_129S1SvImJ_T0031541.1 MGP_129S1SvImJ_G0018911.1 mouse_genomes_project 11 89409760 89418614 + Bzrap1 protein_coding retained_intron MGP_129S1SvImJ_T0031542.1 MGP_129S1SvImJ_G0018911.1 mouse_genomes_project 11 89411458 89418614 + Bzrap1 protein_coding retained_intron MGP_129S1SvImJ_T0031543.1 MGP_129S1SvImJ_G0018911.1 mouse_genomes_project 11 89411617 89412955 + Bzrap1 protein_coding retained_intron MGP_129S1SvImJ_T0031544.1 MGP_129S1SvImJ_G0018911.1 mouse_genomes_project 11 89412961 89417427 + MGP_129S1SvImJ_P0031544 Bzrap1 protein_coding protein_coding MGP_129S1SvImJ_T0031545.1 MGP_129S1SvImJ_G0018911.1 mouse_genomes_project 11 89414242 89415880 + Bzrap1 protein_coding retained_intron MGP_129S1SvImJ_T0033866.1 MGP_129S1SvImJ_G0019463.1 mouse_genomes_project 11 122581291 122587692 - Usp36 protein_coding retained_intron MGP_129S1SvImJ_T0033867.1 MGP_129S1SvImJ_G0019463.1 mouse_genomes_project 11 122581292 122611907 - MGP_129S1SvImJ_P0033867 Usp36 protein_coding protein_coding MGP_129S1SvImJ_T0033868.1 MGP_129S1SvImJ_G0019463.1 mouse_genomes_project 11 122582509 122584929 - Usp36 protein_coding retained_intron MGP_129S1SvImJ_T0033869.1 MGP_129S1SvImJ_G0019463.1 mouse_genomes_project 11 122605596 122611873 - Usp36 protein_coding retained_intron MGP_129S1SvImJ_T0029956.1 MGP_129S1SvImJ_G0018527.1 mouse_genomes_project 11 69748024 69754805 + MGP_129S1SvImJ_P0029956 Kcnab3 protein_coding protein_coding MGP_129S1SvImJ_T0029957.1 MGP_129S1SvImJ_G0018527.1 mouse_genomes_project 11 69749632 69754805 + Kcnab3 protein_coding retained_intron MGP_129S1SvImJ_T0029958.1 MGP_129S1SvImJ_G0018527.1 mouse_genomes_project 11 69752090 69753906 + Kcnab3 protein_coding retained_intron MGP_129S1SvImJ_T0006391.1 MGP_129S1SvImJ_G0005326.1 mouse_genomes_project 11 123132407 123134862 + Gm11750 lincRNA lincRNA MGP_129S1SvImJ_T0032243.1 MGP_129S1SvImJ_G0019084.1 mouse_genomes_project 11 101858882 101879917 - MGP_129S1SvImJ_P0032243 Smarce1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0032244.1 MGP_129S1SvImJ_G0019084.1 mouse_genomes_project 11 101858890 101880489 - MGP_129S1SvImJ_P0032244 Smarce1 protein_coding protein_coding MGP_129S1SvImJ_T0032245.1 MGP_129S1SvImJ_G0019084.1 mouse_genomes_project 11 101859838 101862897 - Smarce1 protein_coding processed_transcript MGP_129S1SvImJ_T0032246.1 MGP_129S1SvImJ_G0019084.1 mouse_genomes_project 11 101868674 101870287 - Smarce1 protein_coding processed_transcript MGP_129S1SvImJ_T0032247.1 MGP_129S1SvImJ_G0019084.1 mouse_genomes_project 11 101869083 101879917 - Smarce1 protein_coding processed_transcript MGP_129S1SvImJ_T0032248.1 MGP_129S1SvImJ_G0019084.1 mouse_genomes_project 11 101869163 101879885 - Smarce1 protein_coding processed_transcript MGP_129S1SvImJ_T0032249.1 MGP_129S1SvImJ_G0019084.1 mouse_genomes_project 11 101874763 101879918 - Smarce1 protein_coding processed_transcript MGP_129S1SvImJ_T0017250.1 MGP_129S1SvImJ_G0015188.1 mouse_genomes_project 11 79286059 79287168 - Gm11193 processed_transcript processed_transcript MGP_129S1SvImJ_T0003343.1 MGP_129S1SvImJ_G0003086.1 mouse_genomes_project 11 110779730 110781724 + Gm11712 antisense antisense MGP_129S1SvImJ_T0032418.1 MGP_129S1SvImJ_G0019168.1 mouse_genomes_project 11 103512970 103532131 - MGP_129S1SvImJ_P0032418 Kcnh4 protein_coding protein_coding MGP_129S1SvImJ_T0032419.1 MGP_129S1SvImJ_G0019168.1 mouse_genomes_project 11 103512976 103532333 - MGP_129S1SvImJ_P0032419 Kcnh4 protein_coding protein_coding MGP_129S1SvImJ_T0012690.1 MGP_129S1SvImJ_G0010779.1 mouse_genomes_project 11 77978370 77978674 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102128.1 MGP_129S1SvImJ_G0039963.1 mouse_genomes_project 11 45573225 45573498 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0009779.1 MGP_129S1SvImJ_G0007895.1 mouse_genomes_project 11 121281602 121281679 + Gm24323 miRNA miRNA MGP_129S1SvImJ_T0012565.1 MGP_129S1SvImJ_G0010654.1 mouse_genomes_project 11 28813783 28814533 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012520.1 MGP_129S1SvImJ_G0010609.1 mouse_genomes_project 11 17165440 17168122 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012495.1 MGP_129S1SvImJ_G0010584.1 mouse_genomes_project 11 7498156 7499071 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029550.1 MGP_129S1SvImJ_G0018440.1 mouse_genomes_project 11 61451278 61456747 - Mapk7 protein_coding processed_transcript MGP_129S1SvImJ_T0029551.1 MGP_129S1SvImJ_G0018440.1 mouse_genomes_project 11 61451278 61456777 - Mapk7 protein_coding processed_transcript MGP_129S1SvImJ_T0029552.1 MGP_129S1SvImJ_G0018440.1 mouse_genomes_project 11 61451278 61456747 - Mapk7 protein_coding processed_transcript MGP_129S1SvImJ_T0029553.1 MGP_129S1SvImJ_G0018440.1 mouse_genomes_project 11 61451278 61456777 - MGP_129S1SvImJ_P0029553 Mapk7 protein_coding protein_coding MGP_129S1SvImJ_T0029554.1 MGP_129S1SvImJ_G0018440.1 mouse_genomes_project 11 61451278 61456747 - MGP_129S1SvImJ_P0029554 Mapk7 protein_coding protein_coding MGP_129S1SvImJ_T0029555.1 MGP_129S1SvImJ_G0018440.1 mouse_genomes_project 11 61451278 61456777 - MGP_129S1SvImJ_P0029555 Mapk7 protein_coding protein_coding MGP_129S1SvImJ_T0029556.1 MGP_129S1SvImJ_G0018440.1 mouse_genomes_project 11 61451925 61453417 - MGP_129S1SvImJ_P0029556 Mapk7 protein_coding protein_coding MGP_129S1SvImJ_T0029557.1 MGP_129S1SvImJ_G0018440.1 mouse_genomes_project 11 61453780 61456190 - Mapk7 protein_coding processed_transcript MGP_129S1SvImJ_T0029558.1 MGP_129S1SvImJ_G0018440.1 mouse_genomes_project 11 61454034 61456747 - Mapk7 protein_coding processed_transcript MGP_129S1SvImJ_T0029559.1 MGP_129S1SvImJ_G0018440.1 mouse_genomes_project 11 61454056 61456747 - Mapk7 protein_coding processed_transcript MGP_129S1SvImJ_T0029560.1 MGP_129S1SvImJ_G0018440.1 mouse_genomes_project 11 61454074 61456887 - Mapk7 protein_coding processed_transcript MGP_129S1SvImJ_T0029561.1 MGP_129S1SvImJ_G0018440.1 mouse_genomes_project 11 61454084 61456747 - Mapk7 protein_coding processed_transcript MGP_129S1SvImJ_T0029562.1 MGP_129S1SvImJ_G0018440.1 mouse_genomes_project 11 61454084 61456669 - Mapk7 protein_coding processed_transcript MGP_129S1SvImJ_T0029563.1 MGP_129S1SvImJ_G0018440.1 mouse_genomes_project 11 61454120 61456669 - Mapk7 protein_coding processed_transcript MGP_129S1SvImJ_T0009678.1 MGP_129S1SvImJ_G0007794.1 mouse_genomes_project 11 34191634 34191720 + Mir103-1 miRNA miRNA MGP_129S1SvImJ_T0009730.1 MGP_129S1SvImJ_G0007846.1 mouse_genomes_project 11 79041850 79041922 - Mir451b miRNA miRNA MGP_129S1SvImJ_T0029959.1 MGP_129S1SvImJ_G0018528.1 mouse_genomes_project 11 69767443 69772779 - Chd3 protein_coding retained_intron MGP_129S1SvImJ_T0029960.1 MGP_129S1SvImJ_G0018528.1 mouse_genomes_project 11 69767443 69770188 - Chd3 protein_coding retained_intron MGP_129S1SvImJ_T0029961.1 MGP_129S1SvImJ_G0018528.1 mouse_genomes_project 11 69767443 69794879 - MGP_129S1SvImJ_P0029961 Chd3 protein_coding protein_coding MGP_129S1SvImJ_T0029962.1 MGP_129S1SvImJ_G0018528.1 mouse_genomes_project 11 69768518 69794879 - MGP_129S1SvImJ_P0029962 Chd3 protein_coding protein_coding MGP_129S1SvImJ_T0029963.1 MGP_129S1SvImJ_G0018528.1 mouse_genomes_project 11 69769303 69788911 - MGP_129S1SvImJ_P0029963 Chd3 protein_coding protein_coding MGP_129S1SvImJ_T0029964.1 MGP_129S1SvImJ_G0018528.1 mouse_genomes_project 11 69770304 69771303 - Chd3 protein_coding retained_intron MGP_129S1SvImJ_T0029965.1 MGP_129S1SvImJ_G0018528.1 mouse_genomes_project 11 69778011 69778609 - Chd3 protein_coding retained_intron MGP_129S1SvImJ_T0029966.1 MGP_129S1SvImJ_G0018528.1 mouse_genomes_project 11 69778604 69780762 - MGP_129S1SvImJ_P0029966 Chd3 protein_coding protein_coding MGP_129S1SvImJ_T0029967.1 MGP_129S1SvImJ_G0018528.1 mouse_genomes_project 11 69784873 69785888 - MGP_129S1SvImJ_P0029967 Chd3 protein_coding protein_coding MGP_129S1SvImJ_T0029968.1 MGP_129S1SvImJ_G0018528.1 mouse_genomes_project 11 69784890 69785888 - MGP_129S1SvImJ_P0029968 Chd3 protein_coding protein_coding MGP_129S1SvImJ_T0029728.1 MGP_129S1SvImJ_G0018476.1 mouse_genomes_project 11 65373226 65468158 - MGP_129S1SvImJ_P0029728 Myocd protein_coding protein_coding MGP_129S1SvImJ_T0029729.1 MGP_129S1SvImJ_G0018476.1 mouse_genomes_project 11 65373235 65468206 - MGP_129S1SvImJ_P0029729 Myocd protein_coding protein_coding MGP_129S1SvImJ_T0029730.1 MGP_129S1SvImJ_G0018476.1 mouse_genomes_project 11 65373430 65378839 - Myocd protein_coding processed_transcript MGP_129S1SvImJ_T0029731.1 MGP_129S1SvImJ_G0018476.1 mouse_genomes_project 11 65375103 65414900 - MGP_129S1SvImJ_P0029731 Myocd protein_coding protein_coding MGP_129S1SvImJ_T0029732.1 MGP_129S1SvImJ_G0018476.1 mouse_genomes_project 11 65392758 65401890 - MGP_129S1SvImJ_P0029732 Myocd protein_coding protein_coding MGP_129S1SvImJ_T0029733.1 MGP_129S1SvImJ_G0018476.1 mouse_genomes_project 11 65420072 65468071 - Myocd protein_coding processed_transcript MGP_129S1SvImJ_T0031224.1 MGP_129S1SvImJ_G0018831.1 mouse_genomes_project 11 84078545 84152718 - MGP_129S1SvImJ_P0031224 Rffl protein_coding protein_coding MGP_129S1SvImJ_T0031225.1 MGP_129S1SvImJ_G0018831.1 mouse_genomes_project 11 84080731 84123902 - MGP_129S1SvImJ_P0031225 Rffl protein_coding protein_coding MGP_129S1SvImJ_T0031226.1 MGP_129S1SvImJ_G0018831.1 mouse_genomes_project 11 84082145 84104921 - MGP_129S1SvImJ_P0031226 Rffl protein_coding protein_coding MGP_129S1SvImJ_T0031227.1 MGP_129S1SvImJ_G0018831.1 mouse_genomes_project 11 84087392 84124146 - MGP_129S1SvImJ_P0031227 Rffl protein_coding protein_coding MGP_129S1SvImJ_T0028491.1 MGP_129S1SvImJ_G0018137.1 mouse_genomes_project 11 30773491 30868015 + MGP_129S1SvImJ_P0028491 Stk10 protein_coding protein_coding MGP_129S1SvImJ_T0028492.1 MGP_129S1SvImJ_G0018137.1 mouse_genomes_project 11 30830051 30841349 + Stk10 protein_coding retained_intron MGP_129S1SvImJ_T0012780.1 MGP_129S1SvImJ_G0010869.1 mouse_genomes_project 11 114952867 114953699 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033385.1 MGP_129S1SvImJ_G0019373.1 mouse_genomes_project 11 119163773 119183179 + MGP_129S1SvImJ_P0033385 Slc9a3r1 protein_coding protein_coding MGP_129S1SvImJ_T0030318.1 MGP_129S1SvImJ_G0018605.1 mouse_genomes_project 11 71157940 71158968 + MGP_129S1SvImJ_P0030318 4930544D05Rik protein_coding protein_coding MGP_129S1SvImJ_T0030319.1 MGP_129S1SvImJ_G0018605.1 mouse_genomes_project 11 71157986 71158963 + 4930544D05Rik protein_coding retained_intron MGP_129S1SvImJ_T0030320.1 MGP_129S1SvImJ_G0018605.1 mouse_genomes_project 11 71157989 71158983 + MGP_129S1SvImJ_P0030320 4930544D05Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030321.1 MGP_129S1SvImJ_G0018605.1 mouse_genomes_project 11 71158002 71158970 + MGP_129S1SvImJ_P0030321 4930544D05Rik protein_coding protein_coding MGP_129S1SvImJ_T0031054.1 MGP_129S1SvImJ_G0018783.1 mouse_genomes_project 11 79523418 79525053 + MGP_129S1SvImJ_P0031054 Sebox protein_coding protein_coding MGP_129S1SvImJ_T0031055.1 MGP_129S1SvImJ_G0018783.1 mouse_genomes_project 11 79523470 79525046 + MGP_129S1SvImJ_P0031055 Sebox protein_coding protein_coding MGP_129S1SvImJ_T0003301.1 MGP_129S1SvImJ_G0003051.1 mouse_genomes_project 11 100009179 100019887 + antisense antisense MGP_129S1SvImJ_T0032045.1 MGP_129S1SvImJ_G0019038.1 mouse_genomes_project 11 100173308 100208167 - MGP_129S1SvImJ_P0032045 Pip4k2b protein_coding protein_coding MGP_129S1SvImJ_T0032046.1 MGP_129S1SvImJ_G0019038.1 mouse_genomes_project 11 100179668 100186475 - Pip4k2b protein_coding processed_transcript MGP_129S1SvImJ_T0030413.1 MGP_129S1SvImJ_G0018620.1 mouse_genomes_project 11 71553321 71559714 - MGP_129S1SvImJ_P0030413 C1qbp protein_coding protein_coding MGP_129S1SvImJ_T0030414.1 MGP_129S1SvImJ_G0018620.1 mouse_genomes_project 11 71553333 71554358 - C1qbp protein_coding retained_intron MGP_129S1SvImJ_T0030415.1 MGP_129S1SvImJ_G0018620.1 mouse_genomes_project 11 71556518 71559695 - C1qbp protein_coding retained_intron MGP_129S1SvImJ_T0033473.1 MGP_129S1SvImJ_G0019393.1 mouse_genomes_project 11 119604212 119624347 + MGP_129S1SvImJ_P0033473 Nup85 protein_coding protein_coding MGP_129S1SvImJ_T0033474.1 MGP_129S1SvImJ_G0019393.1 mouse_genomes_project 11 119604303 119610685 + Nup85 protein_coding processed_transcript MGP_129S1SvImJ_T0033475.1 MGP_129S1SvImJ_G0019393.1 mouse_genomes_project 11 119610908 119622205 + MGP_129S1SvImJ_P0033475 Nup85 protein_coding protein_coding MGP_129S1SvImJ_T0033476.1 MGP_129S1SvImJ_G0019393.1 mouse_genomes_project 11 119617155 119622401 + MGP_129S1SvImJ_P0033476 Nup85 protein_coding protein_coding MGP_129S1SvImJ_T0033477.1 MGP_129S1SvImJ_G0019393.1 mouse_genomes_project 11 119620865 119621781 + Nup85 protein_coding processed_transcript MGP_129S1SvImJ_T0033478.1 MGP_129S1SvImJ_G0019393.1 mouse_genomes_project 11 119621457 119622396 + Nup85 protein_coding processed_transcript MGP_129S1SvImJ_T0033479.1 MGP_129S1SvImJ_G0019393.1 mouse_genomes_project 11 119622002 119624268 + Nup85 protein_coding processed_transcript MGP_129S1SvImJ_T0033480.1 MGP_129S1SvImJ_G0019393.1 mouse_genomes_project 11 119622109 119622640 + Nup85 protein_coding processed_transcript MGP_129S1SvImJ_T0033481.1 MGP_129S1SvImJ_G0019393.1 mouse_genomes_project 11 119623418 119624145 + Nup85 protein_coding processed_transcript MGP_129S1SvImJ_T0012527.1 MGP_129S1SvImJ_G0010616.1 mouse_genomes_project 11 18285538 18286068 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028679.1 MGP_129S1SvImJ_G0018189.1 mouse_genomes_project 11 45051436 45070863 - MGP_129S1SvImJ_P0028679 Nipal4 protein_coding protein_coding MGP_129S1SvImJ_T0029796.1 MGP_129S1SvImJ_G0018493.1 mouse_genomes_project 11 68013575 68021606 + MGP_129S1SvImJ_P0029796 Rcvrn protein_coding protein_coding MGP_129S1SvImJ_T0034306.1 MGP_129S1SvImJ_G0019553.1 mouse_genomes_project 11 126255618 126269132 + MGP_129S1SvImJ_P0034306 Metrnl protein_coding protein_coding MGP_129S1SvImJ_T0034307.1 MGP_129S1SvImJ_G0019553.1 mouse_genomes_project 11 126255832 126268905 + MGP_129S1SvImJ_P0034307 Metrnl protein_coding protein_coding MGP_129S1SvImJ_T0032072.1 MGP_129S1SvImJ_G0019043.1 mouse_genomes_project 11 100319989 100322253 + MGP_129S1SvImJ_P0032072 B230217C12Rik protein_coding protein_coding MGP_129S1SvImJ_T0032073.1 MGP_129S1SvImJ_G0019043.1 mouse_genomes_project 11 100320502 100323309 + B230217C12Rik protein_coding lincRNA MGP_129S1SvImJ_T0032074.1 MGP_129S1SvImJ_G0019043.1 mouse_genomes_project 11 100320524 100323019 + B230217C12Rik protein_coding processed_transcript MGP_129S1SvImJ_T0032075.1 MGP_129S1SvImJ_G0019043.1 mouse_genomes_project 11 100320528 100322253 + B230217C12Rik protein_coding processed_transcript MGP_129S1SvImJ_T0030230.1 MGP_129S1SvImJ_G0018585.1 mouse_genomes_project 11 70737327 70741535 - MGP_129S1SvImJ_P0030230 Slc16a13 protein_coding protein_coding MGP_129S1SvImJ_T0030231.1 MGP_129S1SvImJ_G0018585.1 mouse_genomes_project 11 70739276 70741349 - MGP_129S1SvImJ_P0030231 Slc16a13 protein_coding protein_coding MGP_129S1SvImJ_T0030232.1 MGP_129S1SvImJ_G0018585.1 mouse_genomes_project 11 70739714 70741605 - MGP_129S1SvImJ_P0030232 Slc16a13 protein_coding protein_coding MGP_129S1SvImJ_T0030233.1 MGP_129S1SvImJ_G0018585.1 mouse_genomes_project 11 70739827 70741325 - MGP_129S1SvImJ_P0030233 Slc16a13 protein_coding protein_coding MGP_129S1SvImJ_T0032800.1 MGP_129S1SvImJ_G0019241.1 mouse_genomes_project 11 105668969 105682682 + MGP_129S1SvImJ_P0032800 Meioc protein_coding protein_coding MGP_129S1SvImJ_T0032801.1 MGP_129S1SvImJ_G0019241.1 mouse_genomes_project 11 105670843 105689616 + MGP_129S1SvImJ_P0032801 Meioc protein_coding protein_coding MGP_129S1SvImJ_T0032802.1 MGP_129S1SvImJ_G0019241.1 mouse_genomes_project 11 105670878 105681498 + Meioc protein_coding processed_transcript MGP_129S1SvImJ_T0030560.1 MGP_129S1SvImJ_G0018657.1 mouse_genomes_project 11 73880702 73907070 + MGP_129S1SvImJ_P0030560 Shpk protein_coding protein_coding MGP_129S1SvImJ_T0030561.1 MGP_129S1SvImJ_G0018657.1 mouse_genomes_project 11 73880702 73907061 + MGP_129S1SvImJ_P0030561 Shpk protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0006236.1 MGP_129S1SvImJ_G0005209.1 mouse_genomes_project 11 37017722 37046108 - Gm12130 lincRNA lincRNA MGP_129S1SvImJ_T0031874.1 MGP_129S1SvImJ_G0018995.1 mouse_genomes_project 11 98310153 98322525 + MGP_129S1SvImJ_P0031874 Snf8 protein_coding protein_coding MGP_129S1SvImJ_T0031875.1 MGP_129S1SvImJ_G0018995.1 mouse_genomes_project 11 98310224 98318756 + Snf8 protein_coding processed_transcript MGP_129S1SvImJ_T0031876.1 MGP_129S1SvImJ_G0018995.1 mouse_genomes_project 11 98310233 98322525 + MGP_129S1SvImJ_P0031876 Snf8 protein_coding protein_coding MGP_129S1SvImJ_T0031877.1 MGP_129S1SvImJ_G0018995.1 mouse_genomes_project 11 98319784 98322525 + Snf8 protein_coding processed_transcript MGP_129S1SvImJ_T0031878.1 MGP_129S1SvImJ_G0018995.1 mouse_genomes_project 11 98319918 98322414 + Snf8 protein_coding processed_transcript MGP_129S1SvImJ_T0031373.1 MGP_129S1SvImJ_G0018875.1 mouse_genomes_project 11 86334488 86371167 + MGP_129S1SvImJ_P0031373 Myo19 protein_coding protein_coding MGP_129S1SvImJ_T0031374.1 MGP_129S1SvImJ_G0018875.1 mouse_genomes_project 11 86334510 86337332 + Myo19 protein_coding processed_transcript MGP_129S1SvImJ_T0031375.1 MGP_129S1SvImJ_G0018875.1 mouse_genomes_project 11 86334560 86371063 + Myo19 protein_coding processed_transcript MGP_129S1SvImJ_T0031376.1 MGP_129S1SvImJ_G0018875.1 mouse_genomes_project 11 86334650 86335344 + Myo19 protein_coding processed_transcript MGP_129S1SvImJ_T0031377.1 MGP_129S1SvImJ_G0018875.1 mouse_genomes_project 11 86334693 86371072 + Myo19 protein_coding processed_transcript MGP_129S1SvImJ_T0031378.1 MGP_129S1SvImJ_G0018875.1 mouse_genomes_project 11 86334707 86351850 + MGP_129S1SvImJ_P0031378 Myo19 protein_coding protein_coding MGP_129S1SvImJ_T0031379.1 MGP_129S1SvImJ_G0018875.1 mouse_genomes_project 11 86336926 86371063 + Myo19 protein_coding processed_transcript MGP_129S1SvImJ_T0031184.1 MGP_129S1SvImJ_G0018815.1 mouse_genomes_project 11 81649050 81961681 - MGP_129S1SvImJ_P0031184 Myo1d protein_coding protein_coding MGP_129S1SvImJ_T0031185.1 MGP_129S1SvImJ_G0018815.1 mouse_genomes_project 11 81752323 81961681 - MGP_129S1SvImJ_P0031185 Myo1d protein_coding protein_coding MGP_129S1SvImJ_T0031186.1 MGP_129S1SvImJ_G0018815.1 mouse_genomes_project 11 81845462 81961659 - Myo1d protein_coding retained_intron MGP_129S1SvImJ_T0102145.1 MGP_129S1SvImJ_G0039980.1 mouse_genomes_project 11 74993720 74994661 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0003139.1 MGP_129S1SvImJ_G0002919.1 mouse_genomes_project 11 8851765 8876088 + Gm11998 antisense antisense MGP_129S1SvImJ_T0099267.1 MGP_129S1SvImJ_G0037334.1 mouse_genomes_project 11 86997985 86998132 + Gm23765 snRNA snRNA MGP_129S1SvImJ_T0003140.1 MGP_129S1SvImJ_G0002920.1 mouse_genomes_project 11 8984095 8985402 - Gm12000 antisense antisense MGP_129S1SvImJ_T0028183.1 MGP_129S1SvImJ_G0018069.1 mouse_genomes_project 11 18387742 18395228 - MGP_129S1SvImJ_P0028183 Lgalsl protein_coding protein_coding MGP_129S1SvImJ_T0028184.1 MGP_129S1SvImJ_G0018069.1 mouse_genomes_project 11 18390519 18394927 - Lgalsl protein_coding processed_transcript MGP_129S1SvImJ_T0028185.1 MGP_129S1SvImJ_G0018069.1 mouse_genomes_project 11 18393483 18395228 - Lgalsl protein_coding processed_transcript MGP_129S1SvImJ_T0028186.1 MGP_129S1SvImJ_G0018069.1 mouse_genomes_project 11 18393968 18395194 - Lgalsl protein_coding processed_transcript MGP_129S1SvImJ_T0012607.1 MGP_129S1SvImJ_G0010696.1 mouse_genomes_project 11 49283291 49284303 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028823.1 MGP_129S1SvImJ_G0018239.1 mouse_genomes_project 11 49053573 49127574 + MGP_129S1SvImJ_P0028823 Rasgef1c protein_coding protein_coding MGP_129S1SvImJ_T0028824.1 MGP_129S1SvImJ_G0018239.1 mouse_genomes_project 11 49053593 49127567 + MGP_129S1SvImJ_P0028824 Rasgef1c protein_coding protein_coding MGP_129S1SvImJ_T0028825.1 MGP_129S1SvImJ_G0018239.1 mouse_genomes_project 11 49053899 49128346 + MGP_129S1SvImJ_P0028825 Rasgef1c protein_coding protein_coding MGP_129S1SvImJ_T0028826.1 MGP_129S1SvImJ_G0018239.1 mouse_genomes_project 11 49110098 49123102 + Rasgef1c protein_coding processed_transcript MGP_129S1SvImJ_T0033822.1 MGP_129S1SvImJ_G0019453.1 mouse_genomes_project 11 122091703 122095475 + MGP_129S1SvImJ_P0033822 Syngr2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033823.1 MGP_129S1SvImJ_G0019453.1 mouse_genomes_project 11 122091706 122096310 + MGP_129S1SvImJ_P0033823 Syngr2 protein_coding protein_coding MGP_129S1SvImJ_T0033824.1 MGP_129S1SvImJ_G0019453.1 mouse_genomes_project 11 122091715 122096319 + MGP_129S1SvImJ_P0033824 Syngr2 protein_coding protein_coding MGP_129S1SvImJ_T0033825.1 MGP_129S1SvImJ_G0019453.1 mouse_genomes_project 11 122094257 122095118 + MGP_129S1SvImJ_P0033825 Syngr2 protein_coding protein_coding MGP_129S1SvImJ_T0033826.1 MGP_129S1SvImJ_G0019453.1 mouse_genomes_project 11 122094990 122095412 + Syngr2 protein_coding retained_intron MGP_129S1SvImJ_T0031769.1 MGP_129S1SvImJ_G0018966.1 mouse_genomes_project 11 96776021 96789725 - MGP_129S1SvImJ_P0031769 Xylt2 protein_coding protein_coding MGP_129S1SvImJ_T0031770.1 MGP_129S1SvImJ_G0018966.1 mouse_genomes_project 11 96776757 96789725 - MGP_129S1SvImJ_P0031770 Xylt2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031771.1 MGP_129S1SvImJ_G0018966.1 mouse_genomes_project 11 96778403 96780369 - MGP_129S1SvImJ_P0031771 Xylt2 protein_coding protein_coding MGP_129S1SvImJ_T0031772.1 MGP_129S1SvImJ_G0018966.1 mouse_genomes_project 11 96779047 96779979 - Xylt2 protein_coding retained_intron MGP_129S1SvImJ_T0031773.1 MGP_129S1SvImJ_G0018966.1 mouse_genomes_project 11 96780703 96789617 - MGP_129S1SvImJ_P0031773 Xylt2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031774.1 MGP_129S1SvImJ_G0018966.1 mouse_genomes_project 11 96788172 96789623 - Xylt2 protein_coding processed_transcript MGP_129S1SvImJ_T0012708.1 MGP_129S1SvImJ_G0010797.1 mouse_genomes_project 11 83992860 83993154 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029699.1 MGP_129S1SvImJ_G0018465.1 mouse_genomes_project 11 62974020 62989590 + MGP_129S1SvImJ_P0029699 Tvp23b protein_coding protein_coding MGP_129S1SvImJ_T0029700.1 MGP_129S1SvImJ_G0018465.1 mouse_genomes_project 11 62974055 62986450 + Tvp23b protein_coding processed_transcript MGP_129S1SvImJ_T0029701.1 MGP_129S1SvImJ_G0018465.1 mouse_genomes_project 11 62974179 62979753 + Tvp23b protein_coding processed_transcript MGP_129S1SvImJ_T0029702.1 MGP_129S1SvImJ_G0018465.1 mouse_genomes_project 11 62978214 63009756 + Tvp23b protein_coding processed_transcript MGP_129S1SvImJ_T0029242.1 MGP_129S1SvImJ_G0018347.1 mouse_genomes_project 11 57962342 57982226 + MGP_129S1SvImJ_P0029242 protein_coding protein_coding MGP_129S1SvImJ_T0032316.1 MGP_129S1SvImJ_G0019142.1 mouse_genomes_project 11 102880186 102884357 - MGP_129S1SvImJ_P0032316 Krt15 protein_coding protein_coding MGP_129S1SvImJ_T0032317.1 MGP_129S1SvImJ_G0019142.1 mouse_genomes_project 11 102881463 102882827 - Krt15 protein_coding retained_intron MGP_129S1SvImJ_T0011815.1 MGP_129S1SvImJ_G0009928.1 mouse_genomes_project 11 74083603 74087731 - MGP_129S1SvImJ_P0011815 Olfr377-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0012699.1 MGP_129S1SvImJ_G0010788.1 mouse_genomes_project 11 79743990 79745014 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029925.1 MGP_129S1SvImJ_G0018520.1 mouse_genomes_project 11 69525723 69529343 + MGP_129S1SvImJ_P0029925 Hes7 protein_coding protein_coding MGP_129S1SvImJ_T0009743.1 MGP_129S1SvImJ_G0007859.1 mouse_genomes_project 11 89388878 89388942 + Mir142 miRNA miRNA MGP_129S1SvImJ_T0028489.1 MGP_129S1SvImJ_G0018136.1 mouse_genomes_project 11 30758079 30764001 - MGP_129S1SvImJ_P0028489 Efcab9 protein_coding protein_coding MGP_129S1SvImJ_T0028490.1 MGP_129S1SvImJ_G0018136.1 mouse_genomes_project 11 30758668 30772241 - MGP_129S1SvImJ_P0028490 Efcab9 protein_coding protein_coding MGP_129S1SvImJ_T0027677.1 MGP_129S1SvImJ_G0017955.1 mouse_genomes_project 11 182018 195322 + MGP_129S1SvImJ_P0027677 Pik3ip1 protein_coding protein_coding MGP_129S1SvImJ_T0027678.1 MGP_129S1SvImJ_G0017955.1 mouse_genomes_project 11 182345 183722 + Pik3ip1 protein_coding retained_intron MGP_129S1SvImJ_T0027679.1 MGP_129S1SvImJ_G0017955.1 mouse_genomes_project 11 182404 194034 + MGP_129S1SvImJ_P0027679 Pik3ip1 protein_coding protein_coding MGP_129S1SvImJ_T0027680.1 MGP_129S1SvImJ_G0017955.1 mouse_genomes_project 11 182410 185582 + Pik3ip1 protein_coding retained_intron MGP_129S1SvImJ_T0027681.1 MGP_129S1SvImJ_G0017955.1 mouse_genomes_project 11 182425 185584 + MGP_129S1SvImJ_P0027681 Pik3ip1 protein_coding protein_coding MGP_129S1SvImJ_T0027682.1 MGP_129S1SvImJ_G0017955.1 mouse_genomes_project 11 183690 185298 + Pik3ip1 protein_coding retained_intron MGP_129S1SvImJ_T0027683.1 MGP_129S1SvImJ_G0017955.1 mouse_genomes_project 11 183727 194025 + MGP_129S1SvImJ_P0027683 Pik3ip1 protein_coding protein_coding MGP_129S1SvImJ_T0027684.1 MGP_129S1SvImJ_G0017955.1 mouse_genomes_project 11 184069 194043 + MGP_129S1SvImJ_P0027684 Pik3ip1 protein_coding protein_coding MGP_129S1SvImJ_T0027685.1 MGP_129S1SvImJ_G0017955.1 mouse_genomes_project 11 184590 185580 + Pik3ip1 protein_coding processed_transcript MGP_129S1SvImJ_T0027686.1 MGP_129S1SvImJ_G0017955.1 mouse_genomes_project 11 186003 194356 + Pik3ip1 protein_coding processed_transcript MGP_129S1SvImJ_T0029115.1 MGP_129S1SvImJ_G0018312.1 mouse_genomes_project 11 53716540 53718958 - MGP_129S1SvImJ_P0029115 Csf2 protein_coding protein_coding MGP_129S1SvImJ_T0006297.1 MGP_129S1SvImJ_G0005261.1 mouse_genomes_project 11 78396136 78397692 + 2210008F06Rik lincRNA lincRNA MGP_129S1SvImJ_T0028792.1 MGP_129S1SvImJ_G0018225.1 mouse_genomes_project 11 48432426 48433362 + MGP_129S1SvImJ_P0028792 Olfr1391 protein_coding protein_coding MGP_129S1SvImJ_T0012669.1 MGP_129S1SvImJ_G0010758.1 mouse_genomes_project 11 70439339 70439831 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009712.1 MGP_129S1SvImJ_G0007828.1 mouse_genomes_project 11 70511625 70511714 + Mir324 miRNA miRNA MGP_129S1SvImJ_T0030998.1 MGP_129S1SvImJ_G0018770.1 mouse_genomes_project 11 79191453 79231807 - MGP_129S1SvImJ_P0030998 Supt6 protein_coding protein_coding MGP_129S1SvImJ_T0030999.1 MGP_129S1SvImJ_G0018770.1 mouse_genomes_project 11 79191735 79208495 - Supt6 protein_coding retained_intron MGP_129S1SvImJ_T0032267.1 MGP_129S1SvImJ_G0019097.1 mouse_genomes_project 11 102223291 102225229 - MGP_129S1SvImJ_P0032267 Krtap3-2 protein_coding protein_coding MGP_129S1SvImJ_T0006366.1 MGP_129S1SvImJ_G0005309.1 mouse_genomes_project 11 115838946 115866244 + Gm11680 lincRNA lincRNA MGP_129S1SvImJ_T0099288.1 MGP_129S1SvImJ_G0037355.1 mouse_genomes_project 11 104565958 104566148 + Rnu2-10 snRNA snRNA MGP_129S1SvImJ_T0006191.1 MGP_129S1SvImJ_G0005171.1 mouse_genomes_project 11 11892170 11930000 - 1700046C09Rik lincRNA lincRNA MGP_129S1SvImJ_T0100523.1 MGP_129S1SvImJ_G0038590.1 mouse_genomes_project 11 79164685 79164754 - Snord42b snoRNA snoRNA MGP_129S1SvImJ_T0012583.1 MGP_129S1SvImJ_G0010672.1 mouse_genomes_project 11 39166695 39167161 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033433.1 MGP_129S1SvImJ_G0019385.1 mouse_genomes_project 11 119435990 119439717 - Atp5h protein_coding processed_transcript MGP_129S1SvImJ_T0033434.1 MGP_129S1SvImJ_G0019385.1 mouse_genomes_project 11 119435990 119438713 - Atp5h protein_coding processed_transcript MGP_129S1SvImJ_T0033435.1 MGP_129S1SvImJ_G0019385.1 mouse_genomes_project 11 119435990 119441661 - MGP_129S1SvImJ_P0033435 Atp5h protein_coding protein_coding MGP_129S1SvImJ_T0033436.1 MGP_129S1SvImJ_G0019385.1 mouse_genomes_project 11 119435990 119441616 - MGP_129S1SvImJ_P0033436 Atp5h protein_coding protein_coding MGP_129S1SvImJ_T0033437.1 MGP_129S1SvImJ_G0019385.1 mouse_genomes_project 11 119435990 119441661 - MGP_129S1SvImJ_P0033437 Atp5h protein_coding protein_coding MGP_129S1SvImJ_T0033438.1 MGP_129S1SvImJ_G0019385.1 mouse_genomes_project 11 119436049 119440202 - MGP_129S1SvImJ_P0033438 Atp5h protein_coding protein_coding MGP_129S1SvImJ_T0033439.1 MGP_129S1SvImJ_G0019385.1 mouse_genomes_project 11 119437512 119440436 - MGP_129S1SvImJ_P0033439 Atp5h protein_coding protein_coding MGP_129S1SvImJ_T0033440.1 MGP_129S1SvImJ_G0019385.1 mouse_genomes_project 11 119438547 119440768 - Atp5h protein_coding processed_transcript MGP_129S1SvImJ_T0012744.1 MGP_129S1SvImJ_G0010833.1 mouse_genomes_project 11 100458678 100459122 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033039.1 MGP_129S1SvImJ_G0019296.1 mouse_genomes_project 11 109443235 109484766 - Strada protein_coding processed_transcript MGP_129S1SvImJ_T0033040.1 MGP_129S1SvImJ_G0019296.1 mouse_genomes_project 11 109443256 109475188 - MGP_129S1SvImJ_P0033040 Strada protein_coding protein_coding MGP_129S1SvImJ_T0033041.1 MGP_129S1SvImJ_G0019296.1 mouse_genomes_project 11 109443753 109475214 - MGP_129S1SvImJ_P0033041 Strada protein_coding protein_coding MGP_129S1SvImJ_T0033042.1 MGP_129S1SvImJ_G0019296.1 mouse_genomes_project 11 109448380 109475191 - MGP_129S1SvImJ_P0033042 Strada protein_coding protein_coding MGP_129S1SvImJ_T0033043.1 MGP_129S1SvImJ_G0019296.1 mouse_genomes_project 11 109465364 109475224 - MGP_129S1SvImJ_P0033043 Strada protein_coding protein_coding MGP_129S1SvImJ_T0028919.1 MGP_129S1SvImJ_G0018265.1 mouse_genomes_project 11 50474405 50484296 - MGP_129S1SvImJ_P0028919 BC049762 protein_coding protein_coding MGP_129S1SvImJ_T0028920.1 MGP_129S1SvImJ_G0018265.1 mouse_genomes_project 11 50474405 50484391 - MGP_129S1SvImJ_P0028920 BC049762 protein_coding protein_coding MGP_129S1SvImJ_T0006190.1 MGP_129S1SvImJ_G0005170.1 mouse_genomes_project 11 4476225 4498636 - Gm11986 lincRNA lincRNA MGP_129S1SvImJ_T0029476.1 MGP_129S1SvImJ_G0018424.1 mouse_genomes_project 11 60654590 60696261 - MGP_129S1SvImJ_P0029476 Top3a protein_coding protein_coding MGP_129S1SvImJ_T0029477.1 MGP_129S1SvImJ_G0018424.1 mouse_genomes_project 11 60654591 60696183 - MGP_129S1SvImJ_P0029477 Top3a protein_coding protein_coding MGP_129S1SvImJ_T0029478.1 MGP_129S1SvImJ_G0018424.1 mouse_genomes_project 11 60656423 60696161 - MGP_129S1SvImJ_P0029478 Top3a protein_coding protein_coding MGP_129S1SvImJ_T0029479.1 MGP_129S1SvImJ_G0018424.1 mouse_genomes_project 11 60656766 60696160 - MGP_129S1SvImJ_P0029479 Top3a protein_coding protein_coding MGP_129S1SvImJ_T0029480.1 MGP_129S1SvImJ_G0018424.1 mouse_genomes_project 11 60664000 60667223 - Top3a protein_coding retained_intron MGP_129S1SvImJ_T0029481.1 MGP_129S1SvImJ_G0018424.1 mouse_genomes_project 11 60680405 60696195 - MGP_129S1SvImJ_P0029481 Top3a protein_coding protein_coding MGP_129S1SvImJ_T0017207.1 MGP_129S1SvImJ_G0015162.1 mouse_genomes_project 11 27163630 27166280 - A630052C17Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0032566.1 MGP_129S1SvImJ_G0019201.1 mouse_genomes_project 11 104282851 104295149 + MGP_129S1SvImJ_P0032566 Rundc1 protein_coding protein_coding MGP_129S1SvImJ_T0012518.1 MGP_129S1SvImJ_G0010607.1 mouse_genomes_project 11 16796972 16797116 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029714.1 MGP_129S1SvImJ_G0018472.1 mouse_genomes_project 11 64601511 64694049 + MGP_129S1SvImJ_P0029714 Hs3st3a1 protein_coding protein_coding MGP_129S1SvImJ_T0030576.1 MGP_129S1SvImJ_G0018662.1 mouse_genomes_project 11 74042517 74047397 + MGP_129S1SvImJ_P0030576 Olfr20 protein_coding protein_coding MGP_129S1SvImJ_T0033172.1 MGP_129S1SvImJ_G0019325.1 mouse_genomes_project 11 111371036 111810071 - MGP_129S1SvImJ_P0033172 Prkca protein_coding protein_coding MGP_129S1SvImJ_T0033173.1 MGP_129S1SvImJ_G0019325.1 mouse_genomes_project 11 111375835 111424000 - MGP_129S1SvImJ_P0033173 Prkca protein_coding protein_coding MGP_129S1SvImJ_T0033174.1 MGP_129S1SvImJ_G0019325.1 mouse_genomes_project 11 111419303 111464623 - Prkca protein_coding processed_transcript MGP_129S1SvImJ_T0033175.1 MGP_129S1SvImJ_G0019325.1 mouse_genomes_project 11 111649358 111809791 - Prkca protein_coding processed_transcript MGP_129S1SvImJ_T0032609.1 MGP_129S1SvImJ_G0019209.1 mouse_genomes_project 11 104524105 104529446 + Rdm1 protein_coding processed_transcript MGP_129S1SvImJ_T0032610.1 MGP_129S1SvImJ_G0019209.1 mouse_genomes_project 11 104524920 104536426 + MGP_129S1SvImJ_P0032610 Rdm1 protein_coding protein_coding MGP_129S1SvImJ_T0032611.1 MGP_129S1SvImJ_G0019209.1 mouse_genomes_project 11 104524950 104532398 + Rdm1 protein_coding processed_transcript MGP_129S1SvImJ_T0032612.1 MGP_129S1SvImJ_G0019209.1 mouse_genomes_project 11 104525368 104536398 + MGP_129S1SvImJ_P0032612 Rdm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032613.1 MGP_129S1SvImJ_G0019209.1 mouse_genomes_project 11 104532302 104536286 + Rdm1 protein_coding retained_intron MGP_129S1SvImJ_T0006222.1 MGP_129S1SvImJ_G0005197.1 mouse_genomes_project 11 27610015 27611892 + Gm12088 lincRNA lincRNA MGP_129S1SvImJ_T0032172.1 MGP_129S1SvImJ_G0019070.1 mouse_genomes_project 11 101299430 101325618 - Med24 protein_coding retained_intron MGP_129S1SvImJ_T0032173.1 MGP_129S1SvImJ_G0019070.1 mouse_genomes_project 11 101299430 101326219 - MGP_129S1SvImJ_P0032173 Med24 protein_coding protein_coding MGP_129S1SvImJ_T0032174.1 MGP_129S1SvImJ_G0019070.1 mouse_genomes_project 11 101299682 101301320 - Med24 protein_coding retained_intron MGP_129S1SvImJ_T0032175.1 MGP_129S1SvImJ_G0019070.1 mouse_genomes_project 11 101299739 101326194 - MGP_129S1SvImJ_P0032175 Med24 protein_coding protein_coding MGP_129S1SvImJ_T0032176.1 MGP_129S1SvImJ_G0019070.1 mouse_genomes_project 11 101299739 101326151 - MGP_129S1SvImJ_P0032176 Med24 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032177.1 MGP_129S1SvImJ_G0019070.1 mouse_genomes_project 11 101301266 101302091 - Med24 protein_coding retained_intron MGP_129S1SvImJ_T0032178.1 MGP_129S1SvImJ_G0019070.1 mouse_genomes_project 11 101302105 101302843 - Med24 protein_coding processed_transcript MGP_129S1SvImJ_T0032179.1 MGP_129S1SvImJ_G0019070.1 mouse_genomes_project 11 101303681 101326202 - Med24 protein_coding retained_intron MGP_129S1SvImJ_T0032180.1 MGP_129S1SvImJ_G0019070.1 mouse_genomes_project 11 101304485 101305906 - Med24 protein_coding retained_intron MGP_129S1SvImJ_T0032181.1 MGP_129S1SvImJ_G0019070.1 mouse_genomes_project 11 101314697 101315598 - Med24 protein_coding processed_transcript MGP_129S1SvImJ_T0032182.1 MGP_129S1SvImJ_G0019070.1 mouse_genomes_project 11 101315338 101326158 - MGP_129S1SvImJ_P0032182 Med24 protein_coding protein_coding MGP_129S1SvImJ_T0032183.1 MGP_129S1SvImJ_G0019070.1 mouse_genomes_project 11 101315425 101326187 - Med24 protein_coding retained_intron MGP_129S1SvImJ_T0029299.1 MGP_129S1SvImJ_G0018377.1 mouse_genomes_project 11 58583713 58585560 + MGP_129S1SvImJ_P0029299 protein_coding protein_coding MGP_129S1SvImJ_T0034098.1 MGP_129S1SvImJ_G0019508.1 mouse_genomes_project 11 125011992 125018834 - Fam195b protein_coding processed_transcript MGP_129S1SvImJ_T0034099.1 MGP_129S1SvImJ_G0019508.1 mouse_genomes_project 11 125011992 125018860 - MGP_129S1SvImJ_P0034099 Fam195b protein_coding protein_coding MGP_129S1SvImJ_T0003153.1 MGP_129S1SvImJ_G0002929.1 mouse_genomes_project 11 21955119 21967392 - 4930538E20Rik antisense antisense MGP_129S1SvImJ_T0003154.1 MGP_129S1SvImJ_G0002929.1 mouse_genomes_project 11 21961464 21967349 - 4930538E20Rik antisense antisense MGP_129S1SvImJ_T0032922.1 MGP_129S1SvImJ_G0019270.1 mouse_genomes_project 11 106931379 107076271 - MGP_129S1SvImJ_P0032922 Nsf protein_coding protein_coding MGP_129S1SvImJ_T0032923.1 MGP_129S1SvImJ_G0019270.1 mouse_genomes_project 11 106932522 106936937 - Nsf protein_coding retained_intron MGP_129S1SvImJ_T0032924.1 MGP_129S1SvImJ_G0019270.1 mouse_genomes_project 11 106932531 106933698 - Nsf protein_coding retained_intron MGP_129S1SvImJ_T0032925.1 MGP_129S1SvImJ_G0019270.1 mouse_genomes_project 11 106958203 106985872 - Nsf protein_coding retained_intron MGP_129S1SvImJ_T0032926.1 MGP_129S1SvImJ_G0019270.1 mouse_genomes_project 11 106973189 106985994 - Nsf protein_coding retained_intron MGP_129S1SvImJ_T0032927.1 MGP_129S1SvImJ_G0019270.1 mouse_genomes_project 11 106994938 107076239 - Nsf protein_coding retained_intron MGP_129S1SvImJ_T0032928.1 MGP_129S1SvImJ_G0019270.1 mouse_genomes_project 11 107023835 107076239 - Nsf protein_coding retained_intron MGP_129S1SvImJ_T0032929.1 MGP_129S1SvImJ_G0019270.1 mouse_genomes_project 11 107024862 107058671 - MGP_129S1SvImJ_P0032929 Nsf protein_coding protein_coding MGP_129S1SvImJ_T0032930.1 MGP_129S1SvImJ_G0019270.1 mouse_genomes_project 11 107024966 107041804 - Nsf protein_coding retained_intron MGP_129S1SvImJ_T0032931.1 MGP_129S1SvImJ_G0019270.1 mouse_genomes_project 11 107041800 107058671 - MGP_129S1SvImJ_P0032931 Nsf protein_coding protein_coding MGP_129S1SvImJ_T0012603.1 MGP_129S1SvImJ_G0010692.1 mouse_genomes_project 11 48143478 48143788 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003221.1 MGP_129S1SvImJ_G0002989.1 mouse_genomes_project 11 63043515 63044170 - Cdrt4os2 antisense antisense MGP_129S1SvImJ_T0029329.1 MGP_129S1SvImJ_G0018389.1 mouse_genomes_project 11 58982856 58990153 - MGP_129S1SvImJ_P0029329 Gjc2 protein_coding protein_coding MGP_129S1SvImJ_T0029330.1 MGP_129S1SvImJ_G0018389.1 mouse_genomes_project 11 58982856 58990540 - MGP_129S1SvImJ_P0029330 Gjc2 protein_coding protein_coding MGP_129S1SvImJ_T0100497.1 MGP_129S1SvImJ_G0038564.1 mouse_genomes_project 11 47830066 47830147 + Snord96a snoRNA snoRNA MGP_129S1SvImJ_T0003393.1 MGP_129S1SvImJ_G0003124.1 mouse_genomes_project 11 126386645 126387303 - Gm15643 antisense antisense MGP_129S1SvImJ_T0033324.1 MGP_129S1SvImJ_G0019357.1 mouse_genomes_project 11 118599579 118652210 + MGP_129S1SvImJ_P0033324 Ttyh2 protein_coding protein_coding MGP_129S1SvImJ_T0033325.1 MGP_129S1SvImJ_G0019357.1 mouse_genomes_project 11 118599664 118620788 + Ttyh2 protein_coding processed_transcript MGP_129S1SvImJ_T0098445.1 MGP_129S1SvImJ_G0036530.1 mouse_genomes_project 11 20783827 20783927 - Gm23740 rRNA rRNA MGP_129S1SvImJ_T0032042.1 MGP_129S1SvImJ_G0019037.1 mouse_genomes_project 11 100161704 100171652 + MGP_129S1SvImJ_P0032042 Psmb3 protein_coding protein_coding MGP_129S1SvImJ_T0032043.1 MGP_129S1SvImJ_G0019037.1 mouse_genomes_project 11 100161739 100166370 + Psmb3 protein_coding retained_intron MGP_129S1SvImJ_T0032044.1 MGP_129S1SvImJ_G0019037.1 mouse_genomes_project 11 100170227 100171652 + Psmb3 protein_coding retained_intron MGP_129S1SvImJ_T0006240.1 MGP_129S1SvImJ_G0005213.1 mouse_genomes_project 11 42139918 42141632 + Gm12148 lincRNA lincRNA MGP_129S1SvImJ_T0032511.1 MGP_129S1SvImJ_G0019189.1 mouse_genomes_project 11 104094533 104101194 + MGP_129S1SvImJ_P0032511 Vps25 protein_coding protein_coding MGP_129S1SvImJ_T0032512.1 MGP_129S1SvImJ_G0019189.1 mouse_genomes_project 11 104094533 104102694 + MGP_129S1SvImJ_P0032512 Vps25 protein_coding protein_coding MGP_129S1SvImJ_T0032513.1 MGP_129S1SvImJ_G0019189.1 mouse_genomes_project 11 104094555 104102690 + MGP_129S1SvImJ_P0032513 Vps25 protein_coding protein_coding MGP_129S1SvImJ_T0032514.1 MGP_129S1SvImJ_G0019189.1 mouse_genomes_project 11 104094556 104102061 + MGP_129S1SvImJ_P0032514 Vps25 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032515.1 MGP_129S1SvImJ_G0019189.1 mouse_genomes_project 11 104094561 104102468 + MGP_129S1SvImJ_P0032515 Vps25 protein_coding protein_coding MGP_129S1SvImJ_T0032516.1 MGP_129S1SvImJ_G0019189.1 mouse_genomes_project 11 104094579 104102201 + MGP_129S1SvImJ_P0032516 Vps25 protein_coding protein_coding MGP_129S1SvImJ_T0032517.1 MGP_129S1SvImJ_G0019189.1 mouse_genomes_project 11 104094590 104102355 + Vps25 protein_coding retained_intron MGP_129S1SvImJ_T0099243.1 MGP_129S1SvImJ_G0037310.1 mouse_genomes_project 11 57372182 57372285 + Gm24582 snRNA snRNA MGP_129S1SvImJ_T0029622.1 MGP_129S1SvImJ_G0018452.1 mouse_genomes_project 11 62299592 62300708 + Ttc19 protein_coding processed_transcript MGP_129S1SvImJ_T0029623.1 MGP_129S1SvImJ_G0018452.1 mouse_genomes_project 11 62299601 62335334 + MGP_129S1SvImJ_P0029623 Ttc19 protein_coding protein_coding MGP_129S1SvImJ_T0029624.1 MGP_129S1SvImJ_G0018452.1 mouse_genomes_project 11 62299603 62336514 + MGP_129S1SvImJ_P0029624 Ttc19 protein_coding protein_coding MGP_129S1SvImJ_T0029625.1 MGP_129S1SvImJ_G0018452.1 mouse_genomes_project 11 62301787 62349354 + MGP_129S1SvImJ_P0029625 Ttc19 protein_coding protein_coding MGP_129S1SvImJ_T0029626.1 MGP_129S1SvImJ_G0018452.1 mouse_genomes_project 11 62327099 62349616 + Ttc19 protein_coding processed_transcript MGP_129S1SvImJ_T0032130.1 MGP_129S1SvImJ_G0019058.1 mouse_genomes_project 11 100929443 100932831 - Pgap3 protein_coding processed_transcript MGP_129S1SvImJ_T0032131.1 MGP_129S1SvImJ_G0019058.1 mouse_genomes_project 11 100929443 100942581 - MGP_129S1SvImJ_P0032131 Pgap3 protein_coding protein_coding MGP_129S1SvImJ_T0032132.1 MGP_129S1SvImJ_G0019058.1 mouse_genomes_project 11 100930388 100942526 - MGP_129S1SvImJ_P0032132 Pgap3 protein_coding protein_coding MGP_129S1SvImJ_T0032133.1 MGP_129S1SvImJ_G0019058.1 mouse_genomes_project 11 100932080 100942505 - Pgap3 protein_coding processed_transcript MGP_129S1SvImJ_T0032134.1 MGP_129S1SvImJ_G0019058.1 mouse_genomes_project 11 100940564 100942528 - Pgap3 protein_coding processed_transcript MGP_129S1SvImJ_T0033079.1 MGP_129S1SvImJ_G0019307.1 mouse_genomes_project 11 109667141 109672257 - MGP_129S1SvImJ_P0033079 Icam2 protein_coding protein_coding MGP_129S1SvImJ_T0033080.1 MGP_129S1SvImJ_G0019307.1 mouse_genomes_project 11 109668047 109670277 - MGP_129S1SvImJ_P0033080 Icam2 protein_coding protein_coding MGP_129S1SvImJ_T0033081.1 MGP_129S1SvImJ_G0019307.1 mouse_genomes_project 11 109668293 109679081 - MGP_129S1SvImJ_P0033081 Icam2 protein_coding protein_coding MGP_129S1SvImJ_T0033082.1 MGP_129S1SvImJ_G0019307.1 mouse_genomes_project 11 109670163 109679084 - MGP_129S1SvImJ_P0033082 Icam2 protein_coding protein_coding MGP_129S1SvImJ_T0033083.1 MGP_129S1SvImJ_G0019307.1 mouse_genomes_project 11 109670520 109672472 - Icam2 protein_coding retained_intron MGP_129S1SvImJ_T0009785.1 MGP_129S1SvImJ_G0007901.1 mouse_genomes_project 11 124446762 124446849 + Mir3065 miRNA miRNA MGP_129S1SvImJ_T0034140.1 MGP_129S1SvImJ_G0019517.1 mouse_genomes_project 11 125105174 125113615 - MGP_129S1SvImJ_P0034140 Mafg protein_coding protein_coding MGP_129S1SvImJ_T0034141.1 MGP_129S1SvImJ_G0019517.1 mouse_genomes_project 11 125109061 125110852 - MGP_129S1SvImJ_P0034141 Mafg protein_coding protein_coding MGP_129S1SvImJ_T0034142.1 MGP_129S1SvImJ_G0019517.1 mouse_genomes_project 11 125109195 125110691 - MGP_129S1SvImJ_P0034142 Mafg protein_coding protein_coding MGP_129S1SvImJ_T0034143.1 MGP_129S1SvImJ_G0019517.1 mouse_genomes_project 11 125109286 125110203 - MGP_129S1SvImJ_P0034143 Mafg protein_coding protein_coding MGP_129S1SvImJ_T0034144.1 MGP_129S1SvImJ_G0019517.1 mouse_genomes_project 11 125111278 125113571 - Mafg protein_coding processed_transcript MGP_129S1SvImJ_T0033261.1 MGP_129S1SvImJ_G0019344.1 mouse_genomes_project 11 113881182 113961912 - MGP_129S1SvImJ_P0033261 Abca5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0033262.1 MGP_129S1SvImJ_G0019344.1 mouse_genomes_project 11 113881184 113962026 - MGP_129S1SvImJ_P0033262 Abca5 protein_coding protein_coding MGP_129S1SvImJ_T0033263.1 MGP_129S1SvImJ_G0019344.1 mouse_genomes_project 11 113900880 113961970 - MGP_129S1SvImJ_P0033263 Abca5 protein_coding protein_coding MGP_129S1SvImJ_T0033264.1 MGP_129S1SvImJ_G0019344.1 mouse_genomes_project 11 113930946 113961993 - Abca5 protein_coding retained_intron MGP_129S1SvImJ_T0033265.1 MGP_129S1SvImJ_G0019344.1 mouse_genomes_project 11 113944233 113961988 - MGP_129S1SvImJ_P0033265 Abca5 protein_coding protein_coding MGP_129S1SvImJ_T0033266.1 MGP_129S1SvImJ_G0019344.1 mouse_genomes_project 11 113949870 113962064 - Abca5 protein_coding processed_transcript MGP_129S1SvImJ_T0100533.1 MGP_129S1SvImJ_G0038600.1 mouse_genomes_project 11 101305825 101305929 - Gm22059 snoRNA snoRNA MGP_129S1SvImJ_T0012694.1 MGP_129S1SvImJ_G0010783.1 mouse_genomes_project 11 78570248 78571015 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033577.1 MGP_129S1SvImJ_G0019408.1 mouse_genomes_project 11 120054927 120089500 + MGP_129S1SvImJ_P0033577 Itgb4 protein_coding protein_coding MGP_129S1SvImJ_T0033578.1 MGP_129S1SvImJ_G0019408.1 mouse_genomes_project 11 120054943 120089499 + MGP_129S1SvImJ_P0033578 Itgb4 protein_coding protein_coding MGP_129S1SvImJ_T0033579.1 MGP_129S1SvImJ_G0019408.1 mouse_genomes_project 11 120054943 120089499 + MGP_129S1SvImJ_P0033579 Itgb4 protein_coding protein_coding MGP_129S1SvImJ_T0033580.1 MGP_129S1SvImJ_G0019408.1 mouse_genomes_project 11 120055061 120074809 + Itgb4 protein_coding processed_transcript MGP_129S1SvImJ_T0033581.1 MGP_129S1SvImJ_G0019408.1 mouse_genomes_project 11 120055197 120089500 + MGP_129S1SvImJ_P0033581 Itgb4 protein_coding protein_coding MGP_129S1SvImJ_T0033582.1 MGP_129S1SvImJ_G0019408.1 mouse_genomes_project 11 120058004 120089500 + MGP_129S1SvImJ_P0033582 Itgb4 protein_coding protein_coding MGP_129S1SvImJ_T0033583.1 MGP_129S1SvImJ_G0019408.1 mouse_genomes_project 11 120058004 120089500 + MGP_129S1SvImJ_P0033583 Itgb4 protein_coding protein_coding MGP_129S1SvImJ_T0033584.1 MGP_129S1SvImJ_G0019408.1 mouse_genomes_project 11 120070076 120071176 + Itgb4 protein_coding processed_transcript MGP_129S1SvImJ_T0033585.1 MGP_129S1SvImJ_G0019408.1 mouse_genomes_project 11 120071077 120072099 + Itgb4 protein_coding processed_transcript MGP_129S1SvImJ_T0033586.1 MGP_129S1SvImJ_G0019408.1 mouse_genomes_project 11 120072980 120074379 + Itgb4 protein_coding processed_transcript MGP_129S1SvImJ_T0031011.1 MGP_129S1SvImJ_G0018773.1 mouse_genomes_project 11 79284052 79286957 + MGP_129S1SvImJ_P0031011 BC030499 protein_coding protein_coding MGP_129S1SvImJ_T0031012.1 MGP_129S1SvImJ_G0018773.1 mouse_genomes_project 11 79284103 79288554 + BC030499 protein_coding retained_intron MGP_129S1SvImJ_T0031013.1 MGP_129S1SvImJ_G0018773.1 mouse_genomes_project 11 79284105 79287030 + BC030499 protein_coding retained_intron MGP_129S1SvImJ_T0031014.1 MGP_129S1SvImJ_G0018773.1 mouse_genomes_project 11 79284140 79287045 + BC030499 protein_coding retained_intron MGP_129S1SvImJ_T0031015.1 MGP_129S1SvImJ_G0018773.1 mouse_genomes_project 11 79284689 79290026 + MGP_129S1SvImJ_P0031015 BC030499 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0031016.1 MGP_129S1SvImJ_G0018773.1 mouse_genomes_project 11 79284767 79285375 + BC030499 protein_coding retained_intron MGP_129S1SvImJ_T0031017.1 MGP_129S1SvImJ_G0018773.1 mouse_genomes_project 11 79287018 79290017 + BC030499 protein_coding retained_intron MGP_129S1SvImJ_T0030738.1 MGP_129S1SvImJ_G0018718.1 mouse_genomes_project 11 76349432 76391683 + MGP_129S1SvImJ_P0030738 Pitpna protein_coding protein_coding MGP_129S1SvImJ_T0030739.1 MGP_129S1SvImJ_G0018718.1 mouse_genomes_project 11 76349443 76391657 + MGP_129S1SvImJ_P0030739 Pitpna protein_coding protein_coding MGP_129S1SvImJ_T0030740.1 MGP_129S1SvImJ_G0018718.1 mouse_genomes_project 11 76349454 76389609 + MGP_129S1SvImJ_P0030740 Pitpna protein_coding protein_coding MGP_129S1SvImJ_T0030741.1 MGP_129S1SvImJ_G0018718.1 mouse_genomes_project 11 76349494 76359889 + Pitpna protein_coding retained_intron MGP_129S1SvImJ_T0030742.1 MGP_129S1SvImJ_G0018718.1 mouse_genomes_project 11 76349494 76389312 + MGP_129S1SvImJ_P0030742 Pitpna protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030743.1 MGP_129S1SvImJ_G0018718.1 mouse_genomes_project 11 76383366 76389185 + Pitpna protein_coding processed_transcript MGP_129S1SvImJ_T0017282.1 MGP_129S1SvImJ_G0015204.1 mouse_genomes_project 11 100514614 100520249 + Gm11629 processed_transcript processed_transcript MGP_129S1SvImJ_T0029304.1 MGP_129S1SvImJ_G0018380.1 mouse_genomes_project 11 58666904 58683280 - MGP_129S1SvImJ_P0029304 Zfp39 protein_coding protein_coding MGP_129S1SvImJ_T0017285.1 MGP_129S1SvImJ_G0015207.1 mouse_genomes_project 11 101274714 101275209 - Gm12356 processed_transcript processed_transcript MGP_129S1SvImJ_T0012718.1 MGP_129S1SvImJ_G0010807.1 mouse_genomes_project 11 88654763 88655234 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028960.1 MGP_129S1SvImJ_G0018274.1 mouse_genomes_project 11 50939405 50942881 - MGP_129S1SvImJ_P0028960 0610009B22Rik protein_coding protein_coding MGP_129S1SvImJ_T0028961.1 MGP_129S1SvImJ_G0018274.1 mouse_genomes_project 11 50939405 50942660 - MGP_129S1SvImJ_P0028961 0610009B22Rik protein_coding protein_coding MGP_129S1SvImJ_T0009720.1 MGP_129S1SvImJ_G0007836.1 mouse_genomes_project 11 73298863 73298936 + Gm25678 miRNA miRNA MGP_129S1SvImJ_T0102150.1 MGP_129S1SvImJ_G0039985.1 mouse_genomes_project 11 85064908 85065052 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0030376.1 MGP_129S1SvImJ_G0018617.1 mouse_genomes_project 11 71413555 71517343 + MGP_129S1SvImJ_P0030376 Rabep1 protein_coding protein_coding MGP_129S1SvImJ_T0030377.1 MGP_129S1SvImJ_G0018617.1 mouse_genomes_project 11 71413559 71515533 + Rabep1 protein_coding retained_intron MGP_129S1SvImJ_T0030378.1 MGP_129S1SvImJ_G0018617.1 mouse_genomes_project 11 71413569 71465485 + MGP_129S1SvImJ_P0030378 Rabep1 protein_coding protein_coding MGP_129S1SvImJ_T0030379.1 MGP_129S1SvImJ_G0018617.1 mouse_genomes_project 11 71413576 71515528 + MGP_129S1SvImJ_P0030379 Rabep1 protein_coding protein_coding MGP_129S1SvImJ_T0030380.1 MGP_129S1SvImJ_G0018617.1 mouse_genomes_project 11 71413702 71515170 + MGP_129S1SvImJ_P0030380 Rabep1 protein_coding protein_coding MGP_129S1SvImJ_T0030381.1 MGP_129S1SvImJ_G0018617.1 mouse_genomes_project 11 71413719 71514876 + MGP_129S1SvImJ_P0030381 Rabep1 protein_coding protein_coding MGP_129S1SvImJ_T0030382.1 MGP_129S1SvImJ_G0018617.1 mouse_genomes_project 11 71413752 71514714 + MGP_129S1SvImJ_P0030382 Rabep1 protein_coding protein_coding MGP_129S1SvImJ_T0030383.1 MGP_129S1SvImJ_G0018617.1 mouse_genomes_project 11 71413752 71514714 + MGP_129S1SvImJ_P0030383 Rabep1 protein_coding protein_coding MGP_129S1SvImJ_T0006285.1 MGP_129S1SvImJ_G0005252.1 mouse_genomes_project 11 72089278 72152231 + 9230020A06Rik lincRNA lincRNA MGP_129S1SvImJ_T0006286.1 MGP_129S1SvImJ_G0005252.1 mouse_genomes_project 11 72123265 72151524 + 9230020A06Rik lincRNA lincRNA MGP_129S1SvImJ_T0000877.1 MGP_129S1SvImJ_G0000810.1 mouse_genomes_project 11 125052975 125054143 + TEC TEC MGP_129S1SvImJ_T0012506.1 MGP_129S1SvImJ_G0010595.1 mouse_genomes_project 11 12838203 12845634 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009769.1 MGP_129S1SvImJ_G0007885.1 mouse_genomes_project 11 108836158 108836277 + Gm23990 miRNA miRNA MGP_129S1SvImJ_T0031546.1 MGP_129S1SvImJ_G0018912.1 mouse_genomes_project 11 89426196 89438078 + MGP_129S1SvImJ_P0031546 Mpo protein_coding protein_coding MGP_129S1SvImJ_T0031547.1 MGP_129S1SvImJ_G0018912.1 mouse_genomes_project 11 89426413 89428625 + MGP_129S1SvImJ_P0031547 Mpo protein_coding protein_coding MGP_129S1SvImJ_T0031548.1 MGP_129S1SvImJ_G0018912.1 mouse_genomes_project 11 89426827 89438078 + MGP_129S1SvImJ_P0031548 Mpo protein_coding protein_coding MGP_129S1SvImJ_T0031549.1 MGP_129S1SvImJ_G0018912.1 mouse_genomes_project 11 89427776 89432439 + MGP_129S1SvImJ_P0031549 Mpo protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031550.1 MGP_129S1SvImJ_G0018912.1 mouse_genomes_project 11 89436206 89437490 + MGP_129S1SvImJ_P0031550 Mpo protein_coding protein_coding MGP_129S1SvImJ_T0031551.1 MGP_129S1SvImJ_G0018912.1 mouse_genomes_project 11 89436781 89438038 + Mpo protein_coding retained_intron MGP_129S1SvImJ_T0029979.1 MGP_129S1SvImJ_G0018534.1 mouse_genomes_project 11 69827086 69844213 - MGP_129S1SvImJ_P0029979 Kdm6b protein_coding protein_coding MGP_129S1SvImJ_T0029980.1 MGP_129S1SvImJ_G0018534.1 mouse_genomes_project 11 69831885 69832823 - Kdm6b protein_coding processed_transcript MGP_129S1SvImJ_T0029418.1 MGP_129S1SvImJ_G0018413.1 mouse_genomes_project 11 60067855 60079221 - MGP_129S1SvImJ_P0029418 Srebf1 protein_coding protein_coding MGP_129S1SvImJ_T0029419.1 MGP_129S1SvImJ_G0018413.1 mouse_genomes_project 11 60067857 60089377 - MGP_129S1SvImJ_P0029419 Srebf1 protein_coding protein_coding MGP_129S1SvImJ_T0029420.1 MGP_129S1SvImJ_G0018413.1 mouse_genomes_project 11 60068898 60069808 - Srebf1 protein_coding processed_transcript MGP_129S1SvImJ_T0029421.1 MGP_129S1SvImJ_G0018413.1 mouse_genomes_project 11 60069230 60079229 - MGP_129S1SvImJ_P0029421 Srebf1 protein_coding protein_coding MGP_129S1SvImJ_T0029422.1 MGP_129S1SvImJ_G0018413.1 mouse_genomes_project 11 60070131 60070983 - Srebf1 protein_coding processed_transcript MGP_129S1SvImJ_T0029423.1 MGP_129S1SvImJ_G0018413.1 mouse_genomes_project 11 60070133 60071392 - Srebf1 protein_coding processed_transcript MGP_129S1SvImJ_T0029424.1 MGP_129S1SvImJ_G0018413.1 mouse_genomes_project 11 60070568 60072625 - Srebf1 protein_coding processed_transcript MGP_129S1SvImJ_T0029425.1 MGP_129S1SvImJ_G0018413.1 mouse_genomes_project 11 60071426 60072256 - Srebf1 protein_coding processed_transcript MGP_129S1SvImJ_T0029426.1 MGP_129S1SvImJ_G0018413.1 mouse_genomes_project 11 60071868 60073058 - Srebf1 protein_coding processed_transcript MGP_129S1SvImJ_T0029427.1 MGP_129S1SvImJ_G0018413.1 mouse_genomes_project 11 60072956 60074878 - Srebf1 protein_coding processed_transcript MGP_129S1SvImJ_T0029428.1 MGP_129S1SvImJ_G0018413.1 mouse_genomes_project 11 60074724 60079156 - Srebf1 protein_coding processed_transcript MGP_129S1SvImJ_T0029429.1 MGP_129S1SvImJ_G0018413.1 mouse_genomes_project 11 60075713 60091358 - Srebf1 protein_coding processed_transcript MGP_129S1SvImJ_T0028547.1 MGP_129S1SvImJ_G0018155.1 mouse_genomes_project 11 34178712 34200524 + MGP_129S1SvImJ_P0028547 Pank3 protein_coding protein_coding MGP_129S1SvImJ_T0099295.1 MGP_129S1SvImJ_G0037362.1 mouse_genomes_project 11 119644542 119644649 + Gm25364 snRNA snRNA MGP_129S1SvImJ_T0033156.1 MGP_129S1SvImJ_G0019320.1 mouse_genomes_project 11 110883124 110905291 + MGP_129S1SvImJ_P0033156 Psmd12 protein_coding protein_coding MGP_129S1SvImJ_T0033157.1 MGP_129S1SvImJ_G0019320.1 mouse_genomes_project 11 110883168 110911460 + MGP_129S1SvImJ_P0033157 Psmd12 protein_coding protein_coding MGP_129S1SvImJ_T0033158.1 MGP_129S1SvImJ_G0019320.1 mouse_genomes_project 11 110883217 110904861 + MGP_129S1SvImJ_P0033158 Psmd12 protein_coding protein_coding MGP_129S1SvImJ_T0009724.1 MGP_129S1SvImJ_G0007840.1 mouse_genomes_project 11 75905292 75905358 + Mir132 miRNA miRNA MGP_129S1SvImJ_T0031487.1 MGP_129S1SvImJ_G0018901.1 mouse_genomes_project 11 88704699 88801628 + MGP_129S1SvImJ_P0031487 Trim37 protein_coding protein_coding MGP_129S1SvImJ_T0031488.1 MGP_129S1SvImJ_G0018901.1 mouse_genomes_project 11 88704927 88727259 + MGP_129S1SvImJ_P0031488 Trim37 protein_coding protein_coding MGP_129S1SvImJ_T0031489.1 MGP_129S1SvImJ_G0018901.1 mouse_genomes_project 11 88765539 88788358 + Trim37 protein_coding retained_intron MGP_129S1SvImJ_T0031490.1 MGP_129S1SvImJ_G0018901.1 mouse_genomes_project 11 88769100 88799203 + MGP_129S1SvImJ_P0031490 Trim37 protein_coding protein_coding MGP_129S1SvImJ_T0029033.1 MGP_129S1SvImJ_G0018292.1 mouse_genomes_project 11 52812418 52818099 + Gdf9 protein_coding processed_transcript MGP_129S1SvImJ_T0029034.1 MGP_129S1SvImJ_G0018292.1 mouse_genomes_project 11 52814237 52815176 + Gdf9 protein_coding processed_transcript MGP_129S1SvImJ_T0029035.1 MGP_129S1SvImJ_G0018292.1 mouse_genomes_project 11 52814694 52819101 + MGP_129S1SvImJ_P0029035 Gdf9 protein_coding protein_coding MGP_129S1SvImJ_T0017269.1 MGP_129S1SvImJ_G0015197.1 mouse_genomes_project 11 98774196 98791504 - Gm11529 processed_transcript processed_transcript MGP_129S1SvImJ_T0028937.1 MGP_129S1SvImJ_G0018268.1 mouse_genomes_project 11 50832259 50852060 + MGP_129S1SvImJ_P0028937 Phykpl protein_coding protein_coding MGP_129S1SvImJ_T0028938.1 MGP_129S1SvImJ_G0018268.1 mouse_genomes_project 11 50832259 50850825 + MGP_129S1SvImJ_P0028938 Phykpl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028939.1 MGP_129S1SvImJ_G0018268.1 mouse_genomes_project 11 50832291 50848899 + MGP_129S1SvImJ_P0028939 Phykpl protein_coding protein_coding MGP_129S1SvImJ_T0028940.1 MGP_129S1SvImJ_G0018268.1 mouse_genomes_project 11 50832305 50844581 + Phykpl protein_coding retained_intron MGP_129S1SvImJ_T0028941.1 MGP_129S1SvImJ_G0018268.1 mouse_genomes_project 11 50832309 50834820 + Phykpl protein_coding retained_intron MGP_129S1SvImJ_T0028942.1 MGP_129S1SvImJ_G0018268.1 mouse_genomes_project 11 50832313 50840877 + Phykpl protein_coding retained_intron MGP_129S1SvImJ_T0028943.1 MGP_129S1SvImJ_G0018268.1 mouse_genomes_project 11 50839017 50841452 + Phykpl protein_coding retained_intron MGP_129S1SvImJ_T0028944.1 MGP_129S1SvImJ_G0018268.1 mouse_genomes_project 11 50846837 50848638 + Phykpl protein_coding retained_intron MGP_129S1SvImJ_T0034234.1 MGP_129S1SvImJ_G0019534.1 mouse_genomes_project 11 125477394 125514366 - MGP_129S1SvImJ_P0034234 Csnk1d protein_coding protein_coding MGP_129S1SvImJ_T0034235.1 MGP_129S1SvImJ_G0019534.1 mouse_genomes_project 11 125477394 125514128 - MGP_129S1SvImJ_P0034235 Csnk1d protein_coding protein_coding MGP_129S1SvImJ_T0034236.1 MGP_129S1SvImJ_G0019534.1 mouse_genomes_project 11 125479293 125481332 - Csnk1d protein_coding processed_transcript MGP_129S1SvImJ_T0034237.1 MGP_129S1SvImJ_G0019534.1 mouse_genomes_project 11 125479418 125487271 - Csnk1d protein_coding processed_transcript MGP_129S1SvImJ_T0034238.1 MGP_129S1SvImJ_G0019534.1 mouse_genomes_project 11 125483257 125483707 - Csnk1d protein_coding processed_transcript MGP_129S1SvImJ_T0034239.1 MGP_129S1SvImJ_G0019534.1 mouse_genomes_project 11 125488117 125513907 - MGP_129S1SvImJ_P0034239 Csnk1d protein_coding protein_coding MGP_129S1SvImJ_T0034240.1 MGP_129S1SvImJ_G0019534.1 mouse_genomes_project 11 125488135 125514023 - MGP_129S1SvImJ_P0034240 Csnk1d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034241.1 MGP_129S1SvImJ_G0019534.1 mouse_genomes_project 11 125504394 125514087 - Csnk1d protein_coding retained_intron MGP_129S1SvImJ_T0030431.1 MGP_129S1SvImJ_G0018623.1 mouse_genomes_project 11 71597917 71603483 + MGP_129S1SvImJ_P0030431 Mis12 protein_coding protein_coding MGP_129S1SvImJ_T0030432.1 MGP_129S1SvImJ_G0018623.1 mouse_genomes_project 11 71597917 71605676 + MGP_129S1SvImJ_P0030432 Mis12 protein_coding protein_coding MGP_129S1SvImJ_T0030433.1 MGP_129S1SvImJ_G0018623.1 mouse_genomes_project 11 71597917 71604371 + MGP_129S1SvImJ_P0030433 Mis12 protein_coding protein_coding MGP_129S1SvImJ_T0030434.1 MGP_129S1SvImJ_G0018623.1 mouse_genomes_project 11 71598165 71603472 + MGP_129S1SvImJ_P0030434 Mis12 protein_coding protein_coding MGP_129S1SvImJ_T0030435.1 MGP_129S1SvImJ_G0018623.1 mouse_genomes_project 11 71598168 71603463 + MGP_129S1SvImJ_P0030435 Mis12 protein_coding protein_coding MGP_129S1SvImJ_T0030436.1 MGP_129S1SvImJ_G0018623.1 mouse_genomes_project 11 71598197 71603500 + MGP_129S1SvImJ_P0030436 Mis12 protein_coding protein_coding MGP_129S1SvImJ_T0032009.1 MGP_129S1SvImJ_G0019028.1 mouse_genomes_project 11 99726479 99741987 + MGP_129S1SvImJ_P0032009 Mrpl45 protein_coding protein_coding MGP_129S1SvImJ_T0032010.1 MGP_129S1SvImJ_G0019028.1 mouse_genomes_project 11 99726671 99732491 + MGP_129S1SvImJ_P0032010 Mrpl45 protein_coding protein_coding MGP_129S1SvImJ_T0028525.1 MGP_129S1SvImJ_G0018149.1 mouse_genomes_project 11 32374049 32420991 + MGP_129S1SvImJ_P0028525 Lcp2 protein_coding protein_coding MGP_129S1SvImJ_T0028526.1 MGP_129S1SvImJ_G0018149.1 mouse_genomes_project 11 32374279 32418920 + MGP_129S1SvImJ_P0028526 Lcp2 protein_coding protein_coding MGP_129S1SvImJ_T0028527.1 MGP_129S1SvImJ_G0018149.1 mouse_genomes_project 11 32374312 32420976 + MGP_129S1SvImJ_P0028527 Lcp2 protein_coding protein_coding MGP_129S1SvImJ_T0028528.1 MGP_129S1SvImJ_G0018149.1 mouse_genomes_project 11 32406959 32407375 + Lcp2 protein_coding processed_transcript MGP_129S1SvImJ_T0028529.1 MGP_129S1SvImJ_G0018149.1 mouse_genomes_project 11 32415786 32419449 + Lcp2 protein_coding processed_transcript MGP_129S1SvImJ_T0009780.1 MGP_129S1SvImJ_G0007896.1 mouse_genomes_project 11 122306899 122306980 + Mir6933 miRNA miRNA MGP_129S1SvImJ_T0032155.1 MGP_129S1SvImJ_G0019064.1 mouse_genomes_project 11 101142263 101150572 - MGP_129S1SvImJ_P0032155 Ormdl3 protein_coding protein_coding MGP_129S1SvImJ_T0033139.1 MGP_129S1SvImJ_G0019317.1 mouse_genomes_project 11 110393969 110498842 - MGP_129S1SvImJ_P0033139 Bptf protein_coding protein_coding MGP_129S1SvImJ_T0033140.1 MGP_129S1SvImJ_G0019317.1 mouse_genomes_project 11 110393971 110498616 - MGP_129S1SvImJ_P0033140 Bptf protein_coding protein_coding MGP_129S1SvImJ_T0033141.1 MGP_129S1SvImJ_G0019317.1 mouse_genomes_project 11 110393971 110498616 - MGP_129S1SvImJ_P0033141 Bptf protein_coding protein_coding MGP_129S1SvImJ_T0033142.1 MGP_129S1SvImJ_G0019317.1 mouse_genomes_project 11 110396392 110404573 - Bptf protein_coding processed_transcript MGP_129S1SvImJ_T0033143.1 MGP_129S1SvImJ_G0019317.1 mouse_genomes_project 11 110396683 110498518 - MGP_129S1SvImJ_P0033143 Bptf protein_coding unknown_likely_coding MGP_129S1SvImJ_T0033144.1 MGP_129S1SvImJ_G0019317.1 mouse_genomes_project 11 110403916 110408141 - Bptf protein_coding processed_transcript MGP_129S1SvImJ_T0033145.1 MGP_129S1SvImJ_G0019317.1 mouse_genomes_project 11 110407531 110412372 - MGP_129S1SvImJ_P0033145 Bptf protein_coding protein_coding MGP_129S1SvImJ_T0033146.1 MGP_129S1SvImJ_G0019317.1 mouse_genomes_project 11 110419903 110427780 - MGP_129S1SvImJ_P0033146 Bptf protein_coding protein_coding MGP_129S1SvImJ_T0027802.1 MGP_129S1SvImJ_G0017981.1 mouse_genomes_project 11 1193322 1220046 + MGP_129S1SvImJ_P0027802 Lif protein_coding protein_coding MGP_129S1SvImJ_T0027803.1 MGP_129S1SvImJ_G0017981.1 mouse_genomes_project 11 1214327 1215781 + Lif protein_coding processed_transcript MGP_129S1SvImJ_T0027804.1 MGP_129S1SvImJ_G0017981.1 mouse_genomes_project 11 1214626 1220046 + MGP_129S1SvImJ_P0027804 Lif protein_coding protein_coding MGP_129S1SvImJ_T0003251.1 MGP_129S1SvImJ_G0003013.1 mouse_genomes_project 11 79402605 79413776 + Slc13a2os antisense antisense MGP_129S1SvImJ_T0034200.1 MGP_129S1SvImJ_G0019528.1 mouse_genomes_project 11 125274044 125277350 - Rfng protein_coding processed_transcript MGP_129S1SvImJ_T0034201.1 MGP_129S1SvImJ_G0019528.1 mouse_genomes_project 11 125274046 125277372 - MGP_129S1SvImJ_P0034201 Rfng protein_coding protein_coding MGP_129S1SvImJ_T0031663.1 MGP_129S1SvImJ_G0018945.1 mouse_genomes_project 11 95913964 95949613 + MGP_129S1SvImJ_P0031663 Mbtd1 protein_coding protein_coding MGP_129S1SvImJ_T0031664.1 MGP_129S1SvImJ_G0018945.1 mouse_genomes_project 11 95914204 95949623 + Mbtd1 protein_coding processed_transcript MGP_129S1SvImJ_T0031665.1 MGP_129S1SvImJ_G0018945.1 mouse_genomes_project 11 95914305 95937052 + Mbtd1 protein_coding processed_transcript MGP_129S1SvImJ_T0031666.1 MGP_129S1SvImJ_G0018945.1 mouse_genomes_project 11 95914306 95938513 + Mbtd1 protein_coding processed_transcript MGP_129S1SvImJ_T0031667.1 MGP_129S1SvImJ_G0018945.1 mouse_genomes_project 11 95914315 95973408 + MGP_129S1SvImJ_P0031667 Mbtd1 protein_coding protein_coding MGP_129S1SvImJ_T0031668.1 MGP_129S1SvImJ_G0018945.1 mouse_genomes_project 11 95914978 95958385 + MGP_129S1SvImJ_P0031668 Mbtd1 protein_coding protein_coding MGP_129S1SvImJ_T0031669.1 MGP_129S1SvImJ_G0018945.1 mouse_genomes_project 11 95933281 95975069 + MGP_129S1SvImJ_P0031669 Mbtd1 protein_coding protein_coding MGP_129S1SvImJ_T0031670.1 MGP_129S1SvImJ_G0018945.1 mouse_genomes_project 11 95938097 95940550 + Mbtd1 protein_coding processed_transcript MGP_129S1SvImJ_T0031671.1 MGP_129S1SvImJ_G0018945.1 mouse_genomes_project 11 95940544 95960848 + Mbtd1 protein_coding processed_transcript MGP_129S1SvImJ_T0031672.1 MGP_129S1SvImJ_G0018945.1 mouse_genomes_project 11 95945893 95960557 + Mbtd1 protein_coding processed_transcript MGP_129S1SvImJ_T0031673.1 MGP_129S1SvImJ_G0018945.1 mouse_genomes_project 11 95951204 95954456 + Mbtd1 protein_coding processed_transcript MGP_129S1SvImJ_T0031674.1 MGP_129S1SvImJ_G0018945.1 mouse_genomes_project 11 95953676 95965241 + Mbtd1 protein_coding processed_transcript MGP_129S1SvImJ_T0012785.1 MGP_129S1SvImJ_G0010874.1 mouse_genomes_project 11 118238522 118239655 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012765.1 MGP_129S1SvImJ_G0010854.1 mouse_genomes_project 11 108004047 108005116 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012522.1 MGP_129S1SvImJ_G0010611.1 mouse_genomes_project 11 17232717 17233549 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100522.1 MGP_129S1SvImJ_G0038589.1 mouse_genomes_project 11 79163315 79163386 - Snord4a snoRNA snoRNA MGP_129S1SvImJ_T0029342.1 MGP_129S1SvImJ_G0018392.1 mouse_genomes_project 11 59022090 59028079 + MGP_129S1SvImJ_P0029342 2310033P09Rik protein_coding protein_coding MGP_129S1SvImJ_T0003185.1 MGP_129S1SvImJ_G0002959.1 mouse_genomes_project 11 53812049 53825272 - Gm12224 antisense antisense MGP_129S1SvImJ_T0003186.1 MGP_129S1SvImJ_G0002959.1 mouse_genomes_project 11 53816349 53825223 - Gm12224 antisense antisense MGP_129S1SvImJ_T0031042.1 MGP_129S1SvImJ_G0018780.1 mouse_genomes_project 11 79478990 79485238 + MGP_129S1SvImJ_P0031042 Slc46a1 protein_coding protein_coding MGP_129S1SvImJ_T0031043.1 MGP_129S1SvImJ_G0018780.1 mouse_genomes_project 11 79479043 79484916 + MGP_129S1SvImJ_P0031043 Slc46a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031044.1 MGP_129S1SvImJ_G0018780.1 mouse_genomes_project 11 79483519 79485352 + Slc46a1 protein_coding retained_intron MGP_129S1SvImJ_T0031380.1 MGP_129S1SvImJ_G0018876.1 mouse_genomes_project 11 86370890 86376307 - MGP_129S1SvImJ_P0031380 Znhit3 protein_coding protein_coding MGP_129S1SvImJ_T0031381.1 MGP_129S1SvImJ_G0018876.1 mouse_genomes_project 11 86371231 86376290 - Znhit3 protein_coding processed_transcript MGP_129S1SvImJ_T0031382.1 MGP_129S1SvImJ_G0018876.1 mouse_genomes_project 11 86371409 86376307 - Znhit3 protein_coding processed_transcript MGP_129S1SvImJ_T0031383.1 MGP_129S1SvImJ_G0018876.1 mouse_genomes_project 11 86371445 86376246 - Znhit3 protein_coding processed_transcript MGP_129S1SvImJ_T0031384.1 MGP_129S1SvImJ_G0018876.1 mouse_genomes_project 11 86375379 86376265 - Znhit3 protein_coding retained_intron MGP_129S1SvImJ_T0034100.1 MGP_129S1SvImJ_G0019509.1 mouse_genomes_project 11 125019111 125020265 - MGP_129S1SvImJ_P0034100 Ppp1r27 protein_coding protein_coding MGP_129S1SvImJ_T0032972.1 MGP_129S1SvImJ_G0019279.1 mouse_genomes_project 11 107862619 107936797 + MGP_129S1SvImJ_P0032972 protein_coding protein_coding MGP_129S1SvImJ_T0032973.1 MGP_129S1SvImJ_G0019279.1 mouse_genomes_project 11 107883592 107903510 + protein_coding processed_transcript MGP_129S1SvImJ_T0099294.1 MGP_129S1SvImJ_G0037361.1 mouse_genomes_project 11 113065782 113065893 - Gm22378 snRNA snRNA MGP_129S1SvImJ_T0012571.1 MGP_129S1SvImJ_G0010660.1 mouse_genomes_project 11 31028139 31029097 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012510.1 MGP_129S1SvImJ_G0010599.1 mouse_genomes_project 11 14412187 14416416 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032280.1 MGP_129S1SvImJ_G0019110.1 mouse_genomes_project 11 102352029 102353041 - MGP_129S1SvImJ_P0032280 Gm11563 protein_coding protein_coding MGP_129S1SvImJ_T0030633.1 MGP_129S1SvImJ_G0018695.1 mouse_genomes_project 11 75313393 75342361 + MGP_129S1SvImJ_P0030633 Ccdc92b protein_coding protein_coding MGP_129S1SvImJ_T0032477.1 MGP_129S1SvImJ_G0019181.1 mouse_genomes_project 11 103907143 103934312 - Fam134c protein_coding processed_transcript MGP_129S1SvImJ_T0032478.1 MGP_129S1SvImJ_G0019181.1 mouse_genomes_project 11 103907334 103934312 - MGP_129S1SvImJ_P0032478 Fam134c protein_coding protein_coding MGP_129S1SvImJ_T0032479.1 MGP_129S1SvImJ_G0019181.1 mouse_genomes_project 11 103907340 103934126 - MGP_129S1SvImJ_P0032479 Fam134c protein_coding protein_coding MGP_129S1SvImJ_T0032480.1 MGP_129S1SvImJ_G0019181.1 mouse_genomes_project 11 103908821 103934184 - Fam134c protein_coding processed_transcript MGP_129S1SvImJ_T0032481.1 MGP_129S1SvImJ_G0019181.1 mouse_genomes_project 11 103909404 103934312 - Fam134c protein_coding processed_transcript MGP_129S1SvImJ_T0012476.1 MGP_129S1SvImJ_G0010565.1 mouse_genomes_project 11 1926227 1926721 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032366.1 MGP_129S1SvImJ_G0019157.1 mouse_genomes_project 11 103223962 103234081 - MGP_129S1SvImJ_P0032366 Klhl11 protein_coding protein_coding MGP_129S1SvImJ_T0030931.1 MGP_129S1SvImJ_G0018757.1 mouse_genomes_project 11 78835095 78850263 - MGP_129S1SvImJ_P0030931 Pipox protein_coding unknown_likely_coding MGP_129S1SvImJ_T0030932.1 MGP_129S1SvImJ_G0018757.1 mouse_genomes_project 11 78835541 78837168 - Pipox protein_coding retained_intron MGP_129S1SvImJ_T0030933.1 MGP_129S1SvImJ_G0018757.1 mouse_genomes_project 11 78837100 78839026 - Pipox protein_coding processed_transcript MGP_129S1SvImJ_T0034054.1 MGP_129S1SvImJ_G0019499.1 mouse_genomes_project 11 124909027 124913332 + MGP_129S1SvImJ_P0034054 Tspan10 protein_coding protein_coding MGP_129S1SvImJ_T0034055.1 MGP_129S1SvImJ_G0019499.1 mouse_genomes_project 11 124909054 124910689 + Tspan10 protein_coding processed_transcript MGP_129S1SvImJ_T0032318.1 MGP_129S1SvImJ_G0019143.1 mouse_genomes_project 11 102889237 102894548 - MGP_129S1SvImJ_P0032318 Krt19 protein_coding protein_coding MGP_129S1SvImJ_T0032319.1 MGP_129S1SvImJ_G0019143.1 mouse_genomes_project 11 102889334 102892127 - Krt19 protein_coding processed_transcript MGP_129S1SvImJ_T0032320.1 MGP_129S1SvImJ_G0019143.1 mouse_genomes_project 11 102890547 102897097 - Krt19 protein_coding processed_transcript MGP_129S1SvImJ_T0031811.1 MGP_129S1SvImJ_G0018979.1 mouse_genomes_project 11 97452946 97460694 + MGP_129S1SvImJ_P0031811 Tac4 protein_coding protein_coding MGP_129S1SvImJ_T0011321.1 MGP_129S1SvImJ_G0009437.1 mouse_genomes_project 11 57626427 57626698 + Gm26025 misc_RNA misc_RNA MGP_129S1SvImJ_T0003198.1 MGP_129S1SvImJ_G0002970.1 mouse_genomes_project 11 58683456 58685244 + Gm12257 antisense antisense MGP_129S1SvImJ_T0031712.1 MGP_129S1SvImJ_G0018955.1 mouse_genomes_project 11 96417910 96479668 - MGP_129S1SvImJ_P0031712 Abcc3 protein_coding protein_coding MGP_129S1SvImJ_T0031713.1 MGP_129S1SvImJ_G0018955.1 mouse_genomes_project 11 96417913 96479668 - MGP_129S1SvImJ_P0031713 Abcc3 protein_coding protein_coding MGP_129S1SvImJ_T0031714.1 MGP_129S1SvImJ_G0018955.1 mouse_genomes_project 11 96418270 96428186 - Abcc3 protein_coding processed_transcript MGP_129S1SvImJ_T0031715.1 MGP_129S1SvImJ_G0018955.1 mouse_genomes_project 11 96442771 96448584 - Abcc3 protein_coding processed_transcript MGP_129S1SvImJ_T0031716.1 MGP_129S1SvImJ_G0018955.1 mouse_genomes_project 11 96443416 96479611 - Abcc3 protein_coding processed_transcript MGP_129S1SvImJ_T0031717.1 MGP_129S1SvImJ_G0018955.1 mouse_genomes_project 11 96455309 96479689 - Abcc3 protein_coding processed_transcript MGP_129S1SvImJ_T0003187.1 MGP_129S1SvImJ_G0002960.1 mouse_genomes_project 11 54208226 54214683 + Gm12227 antisense antisense MGP_129S1SvImJ_T0012494.1 MGP_129S1SvImJ_G0010583.1 mouse_genomes_project 11 6993158 6993628 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102143.1 MGP_129S1SvImJ_G0039978.1 mouse_genomes_project 11 74795732 74801680 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0029851.1 MGP_129S1SvImJ_G0018506.1 mouse_genomes_project 11 69269726 69276951 + MGP_129S1SvImJ_P0029851 Rnf222 protein_coding protein_coding MGP_129S1SvImJ_T0029978.1 MGP_129S1SvImJ_G0018533.1 mouse_genomes_project 11 69825098 69826813 - MGP_129S1SvImJ_P0029978 Tmem88 protein_coding protein_coding MGP_129S1SvImJ_T0031696.1 MGP_129S1SvImJ_G0018952.1 mouse_genomes_project 11 96353062 96357089 + MGP_129S1SvImJ_P0031696 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0031697.1 MGP_129S1SvImJ_G0018952.1 mouse_genomes_project 11 96353095 96357089 + MGP_129S1SvImJ_P0031697 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0031698.1 MGP_129S1SvImJ_G0018952.1 mouse_genomes_project 11 96355761 96357089 + MGP_129S1SvImJ_P0031698 protein_coding protein_coding MGP_129S1SvImJ_T0032350.1 MGP_129S1SvImJ_G0019154.1 mouse_genomes_project 11 103174051 103184516 + MGP_129S1SvImJ_P0032350 Fkbp10 protein_coding protein_coding MGP_129S1SvImJ_T0032351.1 MGP_129S1SvImJ_G0019154.1 mouse_genomes_project 11 103174120 103183804 + MGP_129S1SvImJ_P0032351 Fkbp10 protein_coding protein_coding MGP_129S1SvImJ_T0032352.1 MGP_129S1SvImJ_G0019154.1 mouse_genomes_project 11 103174199 103181781 + MGP_129S1SvImJ_P0032352 Fkbp10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032353.1 MGP_129S1SvImJ_G0019154.1 mouse_genomes_project 11 103180115 103181388 + Fkbp10 protein_coding retained_intron MGP_129S1SvImJ_T0032356.1 MGP_129S1SvImJ_G0019154.1 mouse_genomes_project 11 103182729 103183992 + Fkbp10 protein_coding retained_intron MGP_129S1SvImJ_T0029100.1 MGP_129S1SvImJ_G0018311.1 mouse_genomes_project 11 53565192 53579031 + MGP_129S1SvImJ_P0029100 P4ha2 protein_coding protein_coding MGP_129S1SvImJ_T0029101.1 MGP_129S1SvImJ_G0018311.1 mouse_genomes_project 11 53566021 53596724 + MGP_129S1SvImJ_P0029101 P4ha2 protein_coding protein_coding MGP_129S1SvImJ_T0029102.1 MGP_129S1SvImJ_G0018311.1 mouse_genomes_project 11 53566060 53592834 + P4ha2 protein_coding retained_intron MGP_129S1SvImJ_T0029103.1 MGP_129S1SvImJ_G0018311.1 mouse_genomes_project 11 53566060 53596724 + MGP_129S1SvImJ_P0029103 P4ha2 protein_coding protein_coding MGP_129S1SvImJ_T0029104.1 MGP_129S1SvImJ_G0018311.1 mouse_genomes_project 11 53566072 53576482 + P4ha2 protein_coding retained_intron MGP_129S1SvImJ_T0029105.1 MGP_129S1SvImJ_G0018311.1 mouse_genomes_project 11 53566072 53596734 + MGP_129S1SvImJ_P0029105 P4ha2 protein_coding protein_coding MGP_129S1SvImJ_T0029106.1 MGP_129S1SvImJ_G0018311.1 mouse_genomes_project 11 53566077 53575161 + MGP_129S1SvImJ_P0029106 P4ha2 protein_coding protein_coding MGP_129S1SvImJ_T0029107.1 MGP_129S1SvImJ_G0018311.1 mouse_genomes_project 11 53566088 53576410 + MGP_129S1SvImJ_P0029107 P4ha2 protein_coding protein_coding MGP_129S1SvImJ_T0029108.1 MGP_129S1SvImJ_G0018311.1 mouse_genomes_project 11 53566165 53576421 + MGP_129S1SvImJ_P0029108 P4ha2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029109.1 MGP_129S1SvImJ_G0018311.1 mouse_genomes_project 11 53566342 53576421 + MGP_129S1SvImJ_P0029109 P4ha2 protein_coding protein_coding MGP_129S1SvImJ_T0029110.1 MGP_129S1SvImJ_G0018311.1 mouse_genomes_project 11 53572166 53579121 + MGP_129S1SvImJ_P0029110 P4ha2 protein_coding protein_coding MGP_129S1SvImJ_T0029111.1 MGP_129S1SvImJ_G0018311.1 mouse_genomes_project 11 53575867 53585093 + MGP_129S1SvImJ_P0029111 P4ha2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029112.1 MGP_129S1SvImJ_G0018311.1 mouse_genomes_project 11 53578049 53579121 + P4ha2 protein_coding processed_transcript MGP_129S1SvImJ_T0029113.1 MGP_129S1SvImJ_G0018311.1 mouse_genomes_project 11 53589744 53591134 + P4ha2 protein_coding retained_intron MGP_129S1SvImJ_T0029114.1 MGP_129S1SvImJ_G0018311.1 mouse_genomes_project 11 53592764 53596737 + P4ha2 protein_coding retained_intron MGP_129S1SvImJ_T0031617.1 MGP_129S1SvImJ_G0018932.1 mouse_genomes_project 11 91081691 91083322 - MGP_129S1SvImJ_P0031617 Nog protein_coding protein_coding MGP_129S1SvImJ_T0003259.1 MGP_129S1SvImJ_G0003020.1 mouse_genomes_project 11 82267703 82278653 + Gm11417 antisense antisense MGP_129S1SvImJ_T0032303.1 MGP_129S1SvImJ_G0019133.1 mouse_genomes_project 11 102728630 102729391 - MGP_129S1SvImJ_P0032303 Krtap17-1 protein_coding protein_coding MGP_129S1SvImJ_T0006249.1 MGP_129S1SvImJ_G0005221.1 mouse_genomes_project 11 45530397 45531490 - lincRNA lincRNA MGP_129S1SvImJ_T0003130.1 MGP_129S1SvImJ_G0002913.1 mouse_genomes_project 11 32611 33360 - antisense antisense MGP_129S1SvImJ_T0029389.1 MGP_129S1SvImJ_G0018407.1 mouse_genomes_project 11 59668019 59668912 - Cops3 protein_coding processed_transcript MGP_129S1SvImJ_T0029390.1 MGP_129S1SvImJ_G0018407.1 mouse_genomes_project 11 59668019 59690775 - MGP_129S1SvImJ_P0029390 Cops3 protein_coding protein_coding MGP_129S1SvImJ_T0029391.1 MGP_129S1SvImJ_G0018407.1 mouse_genomes_project 11 59671524 59687100 - MGP_129S1SvImJ_P0029391 Cops3 protein_coding protein_coding MGP_129S1SvImJ_T0029392.1 MGP_129S1SvImJ_G0018407.1 mouse_genomes_project 11 59673450 59690775 - Cops3 protein_coding processed_transcript MGP_129S1SvImJ_T0029393.1 MGP_129S1SvImJ_G0018407.1 mouse_genomes_project 11 59674478 59683458 - Cops3 protein_coding processed_transcript MGP_129S1SvImJ_T0029394.1 MGP_129S1SvImJ_G0018407.1 mouse_genomes_project 11 59676374 59690775 - Cops3 protein_coding processed_transcript MGP_129S1SvImJ_T0029395.1 MGP_129S1SvImJ_G0018407.1 mouse_genomes_project 11 59683255 59690689 - MGP_129S1SvImJ_P0029395 Cops3 protein_coding protein_coding MGP_129S1SvImJ_T0029396.1 MGP_129S1SvImJ_G0018407.1 mouse_genomes_project 11 59686802 59690749 - Cops3 protein_coding processed_transcript MGP_129S1SvImJ_T0012745.1 MGP_129S1SvImJ_G0010834.1 mouse_genomes_project 11 100566298 100566454 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0030374.1 MGP_129S1SvImJ_G0018615.1 mouse_genomes_project 11 71326541 71335288 + MGP_129S1SvImJ_P0030374 Zfp3 protein_coding protein_coding MGP_129S1SvImJ_T0003215.1 MGP_129S1SvImJ_G0002984.1 mouse_genomes_project 11 62654170 62656151 + Lrrc75aos2 antisense antisense MGP_129S1SvImJ_T0003216.1 MGP_129S1SvImJ_G0002984.1 mouse_genomes_project 11 62654171 62655426 + Lrrc75aos2 antisense antisense MGP_129S1SvImJ_T0032127.1 MGP_129S1SvImJ_G0019056.1 mouse_genomes_project 11 100924572 100925715 + MGP_129S1SvImJ_P0032127 Tcap protein_coding protein_coding MGP_129S1SvImJ_T0027861.1 MGP_129S1SvImJ_G0017994.1 mouse_genomes_project 11 2074371 2085383 - Gas2l1 protein_coding processed_transcript MGP_129S1SvImJ_T0027862.1 MGP_129S1SvImJ_G0017994.1 mouse_genomes_project 11 2075491 2085389 - MGP_129S1SvImJ_P0027862 Gas2l1 protein_coding protein_coding MGP_129S1SvImJ_T0027865.1 MGP_129S1SvImJ_G0017994.1 mouse_genomes_project 11 2080464 2085416 - MGP_129S1SvImJ_P0027865 Gas2l1 protein_coding protein_coding MGP_129S1SvImJ_T0027866.1 MGP_129S1SvImJ_G0017994.1 mouse_genomes_project 11 2080473 2085366 - MGP_129S1SvImJ_P0027866 Gas2l1 protein_coding protein_coding MGP_129S1SvImJ_T0027867.1 MGP_129S1SvImJ_G0017994.1 mouse_genomes_project 11 2080562 2084941 - Gas2l1 protein_coding processed_transcript MGP_129S1SvImJ_T0027868.1 MGP_129S1SvImJ_G0017994.1 mouse_genomes_project 11 2083962 2085367 - MGP_129S1SvImJ_P0027868 Gas2l1 protein_coding protein_coding MGP_129S1SvImJ_T0027869.1 MGP_129S1SvImJ_G0017994.1 mouse_genomes_project 11 2084506 2085383 - Gas2l1 protein_coding processed_transcript MGP_129S1SvImJ_T0099249.1 MGP_129S1SvImJ_G0037316.1 mouse_genomes_project 11 69391967 69392051 + Gm25819 snRNA snRNA MGP_129S1SvImJ_T0031160.1 MGP_129S1SvImJ_G0018812.1 mouse_genomes_project 11 81544968 81558597 + MGP_129S1SvImJ_P0031160 Zfp207 protein_coding protein_coding MGP_129S1SvImJ_T0031161.1 MGP_129S1SvImJ_G0018812.1 mouse_genomes_project 11 81544968 81568127 + MGP_129S1SvImJ_P0031161 Zfp207 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031162.1 MGP_129S1SvImJ_G0018812.1 mouse_genomes_project 11 81544992 81558600 + MGP_129S1SvImJ_P0031162 Zfp207 protein_coding protein_coding MGP_129S1SvImJ_T0031163.1 MGP_129S1SvImJ_G0018812.1 mouse_genomes_project 11 81545020 81556635 + MGP_129S1SvImJ_P0031163 Zfp207 protein_coding protein_coding MGP_129S1SvImJ_T0031164.1 MGP_129S1SvImJ_G0018812.1 mouse_genomes_project 11 81545086 81557918 + MGP_129S1SvImJ_P0031164 Zfp207 protein_coding protein_coding MGP_129S1SvImJ_T0031165.1 MGP_129S1SvImJ_G0018812.1 mouse_genomes_project 11 81547585 81554227 + MGP_129S1SvImJ_P0031165 Zfp207 protein_coding protein_coding MGP_129S1SvImJ_T0031166.1 MGP_129S1SvImJ_G0018812.1 mouse_genomes_project 11 81550779 81567215 + MGP_129S1SvImJ_P0031166 Zfp207 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0100508.1 MGP_129S1SvImJ_G0038575.1 mouse_genomes_project 11 62850279 62850420 + Gm24151 snoRNA snoRNA MGP_129S1SvImJ_T0003320.1 MGP_129S1SvImJ_G0003065.1 mouse_genomes_project 11 104819048 104824032 + Gm11551 antisense antisense MGP_129S1SvImJ_T0034287.1 MGP_129S1SvImJ_G0019547.1 mouse_genomes_project 11 125906404 125943508 - MGP_129S1SvImJ_P0034287 Rab40b protein_coding protein_coding MGP_129S1SvImJ_T0034288.1 MGP_129S1SvImJ_G0019547.1 mouse_genomes_project 11 125908287 125943322 - Rab40b protein_coding processed_transcript MGP_129S1SvImJ_T0034289.1 MGP_129S1SvImJ_G0019547.1 mouse_genomes_project 11 125909875 125943478 - Rab40b protein_coding processed_transcript MGP_129S1SvImJ_T0034290.1 MGP_129S1SvImJ_G0019547.1 mouse_genomes_project 11 125909894 125943487 - Rab40b protein_coding processed_transcript MGP_129S1SvImJ_T0031653.1 MGP_129S1SvImJ_G0018943.1 mouse_genomes_project 11 95076102 95077939 + Car10 protein_coding processed_transcript MGP_129S1SvImJ_T0031654.1 MGP_129S1SvImJ_G0018943.1 mouse_genomes_project 11 95076478 95505631 + MGP_129S1SvImJ_P0031654 Car10 protein_coding protein_coding MGP_129S1SvImJ_T0031655.1 MGP_129S1SvImJ_G0018943.1 mouse_genomes_project 11 95076478 95380617 + MGP_129S1SvImJ_P0031655 Car10 protein_coding protein_coding MGP_129S1SvImJ_T0031656.1 MGP_129S1SvImJ_G0018943.1 mouse_genomes_project 11 95076478 95617699 + MGP_129S1SvImJ_P0031656 Car10 protein_coding protein_coding MGP_129S1SvImJ_T0031657.1 MGP_129S1SvImJ_G0018943.1 mouse_genomes_project 11 95076488 95617228 + MGP_129S1SvImJ_P0031657 Car10 protein_coding protein_coding MGP_129S1SvImJ_T0031658.1 MGP_129S1SvImJ_G0018943.1 mouse_genomes_project 11 95077363 95617703 + MGP_129S1SvImJ_P0031658 Car10 protein_coding protein_coding MGP_129S1SvImJ_T0031659.1 MGP_129S1SvImJ_G0018943.1 mouse_genomes_project 11 95077363 95175441 + MGP_129S1SvImJ_P0031659 Car10 protein_coding protein_coding MGP_129S1SvImJ_T0033093.1 MGP_129S1SvImJ_G0019310.1 mouse_genomes_project 11 109968922 110040009 - MGP_129S1SvImJ_P0033093 Pecam1 protein_coding protein_coding MGP_129S1SvImJ_T0033094.1 MGP_129S1SvImJ_G0019310.1 mouse_genomes_project 11 109968927 110040219 - MGP_129S1SvImJ_P0033094 Pecam1 protein_coding protein_coding MGP_129S1SvImJ_T0033095.1 MGP_129S1SvImJ_G0019310.1 mouse_genomes_project 11 109976729 109980884 - Pecam1 protein_coding retained_intron MGP_129S1SvImJ_T0033096.1 MGP_129S1SvImJ_G0019310.1 mouse_genomes_project 11 109977351 110083952 - MGP_129S1SvImJ_P0033096 Pecam1 protein_coding protein_coding MGP_129S1SvImJ_T0033097.1 MGP_129S1SvImJ_G0019310.1 mouse_genomes_project 11 110010812 110014564 - Pecam1 protein_coding retained_intron MGP_129S1SvImJ_T0033098.1 MGP_129S1SvImJ_G0019310.1 mouse_genomes_project 11 110014299 110039903 - MGP_129S1SvImJ_P0033098 Pecam1 protein_coding protein_coding MGP_129S1SvImJ_T0028132.1 MGP_129S1SvImJ_G0018054.1 mouse_genomes_project 11 14364502 14402930 - MGP_129S1SvImJ_P0028132 Plek protein_coding protein_coding MGP_129S1SvImJ_T0028133.1 MGP_129S1SvImJ_G0018054.1 mouse_genomes_project 11 14387909 14396029 - MGP_129S1SvImJ_P0028133 Plek protein_coding protein_coding MGP_129S1SvImJ_T0032158.1 MGP_129S1SvImJ_G0019066.1 mouse_genomes_project 11 101233618 101249630 + MGP_129S1SvImJ_P0032158 Gsdma2 protein_coding protein_coding MGP_129S1SvImJ_T0032159.1 MGP_129S1SvImJ_G0019066.1 mouse_genomes_project 11 101233622 101237062 + Gsdma2 protein_coding processed_transcript MGP_129S1SvImJ_T0032160.1 MGP_129S1SvImJ_G0019066.1 mouse_genomes_project 11 101233622 101249619 + MGP_129S1SvImJ_P0032160 Gsdma2 protein_coding protein_coding MGP_129S1SvImJ_T0032161.1 MGP_129S1SvImJ_G0019066.1 mouse_genomes_project 11 101233628 101235705 + Gsdma2 protein_coding processed_transcript MGP_129S1SvImJ_T0032162.1 MGP_129S1SvImJ_G0019066.1 mouse_genomes_project 11 101233634 101236634 + Gsdma2 protein_coding processed_transcript MGP_129S1SvImJ_T0032163.1 MGP_129S1SvImJ_G0019066.1 mouse_genomes_project 11 101237597 101243730 + Gsdma2 protein_coding processed_transcript MGP_129S1SvImJ_T0032164.1 MGP_129S1SvImJ_G0019066.1 mouse_genomes_project 11 101243190 101246792 + Gsdma2 protein_coding processed_transcript MGP_129S1SvImJ_T0030684.1 MGP_129S1SvImJ_G0018705.1 mouse_genomes_project 11 75907541 75910435 - MGP_129S1SvImJ_P0030684 Ovca2 protein_coding protein_coding MGP_129S1SvImJ_T0030687.1 MGP_129S1SvImJ_G0018705.1 mouse_genomes_project 11 75909400 75910387 - Ovca2 protein_coding processed_transcript MGP_129S1SvImJ_T0012697.1 MGP_129S1SvImJ_G0010786.1 mouse_genomes_project 11 79582936 79583218 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017317.1 MGP_129S1SvImJ_G0015221.1 mouse_genomes_project 11 121872030 121874612 + 2900041M22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0032957.1 MGP_129S1SvImJ_G0019276.1 mouse_genomes_project 11 107661648 107709466 - MGP_129S1SvImJ_P0032957 Cdc27 protein_coding protein_coding MGP_129S1SvImJ_T0032958.1 MGP_129S1SvImJ_G0019276.1 mouse_genomes_project 11 107663844 107709375 - MGP_129S1SvImJ_P0032958 Cdc27 protein_coding protein_coding MGP_129S1SvImJ_T0032959.1 MGP_129S1SvImJ_G0019276.1 mouse_genomes_project 11 107667254 107672243 - Cdc27 protein_coding processed_transcript MGP_129S1SvImJ_T0032960.1 MGP_129S1SvImJ_G0019276.1 mouse_genomes_project 11 107679249 107709461 - MGP_129S1SvImJ_P0032960 Cdc27 protein_coding protein_coding MGP_129S1SvImJ_T0032961.1 MGP_129S1SvImJ_G0019276.1 mouse_genomes_project 11 107690745 107709603 - Cdc27 protein_coding processed_transcript MGP_129S1SvImJ_T0012516.1 MGP_129S1SvImJ_G0010605.1 mouse_genomes_project 11 15939046 15944590 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009690.1 MGP_129S1SvImJ_G0007806.1 mouse_genomes_project 11 51424379 51424470 + Mir3061 miRNA miRNA MGP_129S1SvImJ_T0027882.1 MGP_129S1SvImJ_G0017997.1 mouse_genomes_project 11 2121923 2129040 + MGP_129S1SvImJ_P0027882 Rhbdd3 protein_coding protein_coding MGP_129S1SvImJ_T0027883.1 MGP_129S1SvImJ_G0017997.1 mouse_genomes_project 11 2122074 2123585 + Rhbdd3 protein_coding processed_transcript MGP_129S1SvImJ_T0027884.1 MGP_129S1SvImJ_G0017997.1 mouse_genomes_project 11 2122270 2123505 + Rhbdd3 protein_coding processed_transcript MGP_129S1SvImJ_T0027885.1 MGP_129S1SvImJ_G0017997.1 mouse_genomes_project 11 2122430 2126298 + MGP_129S1SvImJ_P0027885 Rhbdd3 protein_coding protein_coding MGP_129S1SvImJ_T0027886.1 MGP_129S1SvImJ_G0017997.1 mouse_genomes_project 11 2122436 2129040 + MGP_129S1SvImJ_P0027886 Rhbdd3 protein_coding protein_coding MGP_129S1SvImJ_T0027887.1 MGP_129S1SvImJ_G0017997.1 mouse_genomes_project 11 2122473 2126203 + MGP_129S1SvImJ_P0027887 Rhbdd3 protein_coding protein_coding MGP_129S1SvImJ_T0027888.1 MGP_129S1SvImJ_G0017997.1 mouse_genomes_project 11 2122605 2126209 + MGP_129S1SvImJ_P0027888 Rhbdd3 protein_coding protein_coding MGP_129S1SvImJ_T0027889.1 MGP_129S1SvImJ_G0017997.1 mouse_genomes_project 11 2123154 2129040 + MGP_129S1SvImJ_P0027889 Rhbdd3 protein_coding protein_coding MGP_129S1SvImJ_T0027890.1 MGP_129S1SvImJ_G0017997.1 mouse_genomes_project 11 2123167 2128177 + MGP_129S1SvImJ_P0027890 Rhbdd3 protein_coding protein_coding MGP_129S1SvImJ_T0027891.1 MGP_129S1SvImJ_G0017997.1 mouse_genomes_project 11 2123234 2129042 + Rhbdd3 protein_coding processed_transcript MGP_129S1SvImJ_T0012554.1 MGP_129S1SvImJ_G0010643.1 mouse_genomes_project 11 26964346 26966419 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028811.1 MGP_129S1SvImJ_G0018237.1 mouse_genomes_project 11 48941114 48954673 + Gfpt2 protein_coding retained_intron MGP_129S1SvImJ_T0028812.1 MGP_129S1SvImJ_G0018237.1 mouse_genomes_project 11 48941123 48985536 + MGP_129S1SvImJ_P0028812 Gfpt2 protein_coding protein_coding MGP_129S1SvImJ_T0029219.1 MGP_129S1SvImJ_G0018339.1 mouse_genomes_project 11 57439958 57449572 + MGP_129S1SvImJ_P0029219 Sap30l protein_coding protein_coding MGP_129S1SvImJ_T0032052.1 MGP_129S1SvImJ_G0019041.1 mouse_genomes_project 11 100249065 100257304 - MGP_129S1SvImJ_P0032052 Rpl23 protein_coding protein_coding MGP_129S1SvImJ_T0032053.1 MGP_129S1SvImJ_G0019041.1 mouse_genomes_project 11 100249576 100257143 - Rpl23 protein_coding processed_transcript MGP_129S1SvImJ_T0032054.1 MGP_129S1SvImJ_G0019041.1 mouse_genomes_project 11 100249594 100252010 - Rpl23 protein_coding processed_transcript MGP_129S1SvImJ_T0032055.1 MGP_129S1SvImJ_G0019041.1 mouse_genomes_project 11 100256228 100257229 - Rpl23 protein_coding processed_transcript MGP_129S1SvImJ_T0032056.1 MGP_129S1SvImJ_G0019041.1 mouse_genomes_project 11 100256270 100257249 - MGP_129S1SvImJ_P0032056 Rpl23 protein_coding protein_coding MGP_129S1SvImJ_T0028160.1 MGP_129S1SvImJ_G0018063.1 mouse_genomes_project 11 17544328 17602112 - MGP_129S1SvImJ_P0028160 Actr2 protein_coding protein_coding MGP_129S1SvImJ_T0028161.1 MGP_129S1SvImJ_G0018063.1 mouse_genomes_project 11 17564782 17602066 - Actr2 protein_coding processed_transcript MGP_129S1SvImJ_T0028162.1 MGP_129S1SvImJ_G0018063.1 mouse_genomes_project 11 17588437 17602108 - Actr2 protein_coding retained_intron MGP_129S1SvImJ_T0032238.1 MGP_129S1SvImJ_G0019082.1 mouse_genomes_project 11 101704766 101728437 - MGP_129S1SvImJ_P0032238 Tns4 protein_coding protein_coding MGP_129S1SvImJ_T0032239.1 MGP_129S1SvImJ_G0019082.1 mouse_genomes_project 11 101707248 101712987 - Tns4 protein_coding processed_transcript MGP_129S1SvImJ_T0032240.1 MGP_129S1SvImJ_G0019082.1 mouse_genomes_project 11 101709801 101714464 - Tns4 protein_coding retained_intron MGP_129S1SvImJ_T0032241.1 MGP_129S1SvImJ_G0019082.1 mouse_genomes_project 11 101724595 101728416 - Tns4 protein_coding retained_intron MGP_129S1SvImJ_T0100494.1 MGP_129S1SvImJ_G0038561.1 mouse_genomes_project 11 44524682 44524814 + Gm22284 snoRNA snoRNA MGP_129S1SvImJ_T0012473.1 MGP_129S1SvImJ_G0010562.1 mouse_genomes_project 11 772714 773534 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028157.1 MGP_129S1SvImJ_G0018062.1 mouse_genomes_project 11 17392509 17501315 + MGP_129S1SvImJ_P0028157 Spred2 protein_coding protein_coding MGP_129S1SvImJ_T0028158.1 MGP_129S1SvImJ_G0018062.1 mouse_genomes_project 11 17392576 17499858 + MGP_129S1SvImJ_P0028158 Spred2 protein_coding protein_coding MGP_129S1SvImJ_T0028159.1 MGP_129S1SvImJ_G0018062.1 mouse_genomes_project 11 17424562 17495421 + MGP_129S1SvImJ_P0028159 Spred2 protein_coding protein_coding MGP_129S1SvImJ_T0006233.1 MGP_129S1SvImJ_G0005206.1 mouse_genomes_project 11 32472204 32473799 + Gm12121 lincRNA lincRNA MGP_129S1SvImJ_T0028055.1 MGP_129S1SvImJ_G0018040.1 mouse_genomes_project 11 6358767 6380279 + MGP_129S1SvImJ_P0028055 Upp1 protein_coding protein_coding MGP_129S1SvImJ_T0028056.1 MGP_129S1SvImJ_G0018040.1 mouse_genomes_project 11 6358771 6380285 + MGP_129S1SvImJ_P0028056 Upp1 protein_coding protein_coding MGP_129S1SvImJ_T0028057.1 MGP_129S1SvImJ_G0018040.1 mouse_genomes_project 11 6358909 6378844 + MGP_129S1SvImJ_P0028057 Upp1 protein_coding protein_coding MGP_129S1SvImJ_T0028058.1 MGP_129S1SvImJ_G0018040.1 mouse_genomes_project 11 6359171 6380282 + MGP_129S1SvImJ_P0028058 Upp1 protein_coding protein_coding MGP_129S1SvImJ_T0028059.1 MGP_129S1SvImJ_G0018040.1 mouse_genomes_project 11 6359212 6377437 + MGP_129S1SvImJ_P0028059 Upp1 protein_coding protein_coding MGP_129S1SvImJ_T0028060.1 MGP_129S1SvImJ_G0018040.1 mouse_genomes_project 11 6359291 6360338 + Upp1 protein_coding retained_intron MGP_129S1SvImJ_T0028061.1 MGP_129S1SvImJ_G0018040.1 mouse_genomes_project 11 6359451 6377366 + MGP_129S1SvImJ_P0028061 Upp1 protein_coding protein_coding MGP_129S1SvImJ_T0028062.1 MGP_129S1SvImJ_G0018040.1 mouse_genomes_project 11 6368082 6378864 + MGP_129S1SvImJ_P0028062 Upp1 protein_coding protein_coding MGP_129S1SvImJ_T0028063.1 MGP_129S1SvImJ_G0018040.1 mouse_genomes_project 11 6377129 6380197 + Upp1 protein_coding retained_intron MGP_129S1SvImJ_T0006221.1 MGP_129S1SvImJ_G0005196.1 mouse_genomes_project 11 26736114 26807421 + Gm12082 lincRNA lincRNA MGP_129S1SvImJ_T0028224.1 MGP_129S1SvImJ_G0018078.1 mouse_genomes_project 11 20458158 20561901 - MGP_129S1SvImJ_P0028224 Gm12057 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0003392.1 MGP_129S1SvImJ_G0003123.1 mouse_genomes_project 11 125559621 125582448 + Gm11775 antisense antisense MGP_129S1SvImJ_T0098728.1 MGP_129S1SvImJ_G0036813.1 mouse_genomes_project 11 17136374 17136518 - Gm23386 scaRNA scaRNA MGP_129S1SvImJ_T0030839.1 MGP_129S1SvImJ_G0018740.1 mouse_genomes_project 11 77754670 77769934 + MGP_129S1SvImJ_P0030839 Tmigd1 protein_coding protein_coding MGP_129S1SvImJ_T0030840.1 MGP_129S1SvImJ_G0018740.1 mouse_genomes_project 11 77756986 77763465 + MGP_129S1SvImJ_P0030840 Tmigd1 protein_coding protein_coding MGP_129S1SvImJ_T0030841.1 MGP_129S1SvImJ_G0018740.1 mouse_genomes_project 11 77757056 77769933 + MGP_129S1SvImJ_P0030841 Tmigd1 protein_coding protein_coding MGP_129S1SvImJ_T0030842.1 MGP_129S1SvImJ_G0018740.1 mouse_genomes_project 11 77757073 77769444 + Tmigd1 protein_coding processed_transcript MGP_129S1SvImJ_T0029096.1 MGP_129S1SvImJ_G0018310.1 mouse_genomes_project 11 53514662 53528679 - MGP_129S1SvImJ_P0029096 Pdlim4 protein_coding protein_coding MGP_129S1SvImJ_T0029097.1 MGP_129S1SvImJ_G0018310.1 mouse_genomes_project 11 53515655 53524532 - MGP_129S1SvImJ_P0029097 Pdlim4 protein_coding protein_coding MGP_129S1SvImJ_T0029098.1 MGP_129S1SvImJ_G0018310.1 mouse_genomes_project 11 53518686 53528738 - Pdlim4 protein_coding retained_intron MGP_129S1SvImJ_T0029099.1 MGP_129S1SvImJ_G0018310.1 mouse_genomes_project 11 53523458 53524304 - Pdlim4 protein_coding processed_transcript MGP_129S1SvImJ_T0011312.1 MGP_129S1SvImJ_G0009428.1 mouse_genomes_project 11 533061 533297 - Gm27517 misc_RNA misc_RNA MGP_129S1SvImJ_T0034291.1 MGP_129S1SvImJ_G0019548.1 mouse_genomes_project 11 125969562 125979506 + MGP_129S1SvImJ_P0034291 Fn3krp protein_coding protein_coding MGP_129S1SvImJ_T0003217.1 MGP_129S1SvImJ_G0002985.1 mouse_genomes_project 11 62687026 62692926 + Lrrc75aos1 antisense antisense MGP_129S1SvImJ_T0030618.1 MGP_129S1SvImJ_G0018688.1 mouse_genomes_project 11 74889420 74890282 + MGP_129S1SvImJ_P0030618 protein_coding protein_coding MGP_129S1SvImJ_T0003341.1 MGP_129S1SvImJ_G0003084.1 mouse_genomes_project 11 110533918 110544024 + Gm11715 antisense antisense MGP_129S1SvImJ_T0003347.1 MGP_129S1SvImJ_G0003090.1 mouse_genomes_project 11 112002215 112006779 - Cep112os1 antisense antisense MGP_129S1SvImJ_T0033006.1 MGP_129S1SvImJ_G0019286.1 mouse_genomes_project 11 108828526 109033130 + MGP_129S1SvImJ_P0033006 Tanc2 protein_coding protein_coding MGP_129S1SvImJ_T0033007.1 MGP_129S1SvImJ_G0019286.1 mouse_genomes_project 11 108828531 109191386 + MGP_129S1SvImJ_P0033007 Tanc2 protein_coding protein_coding MGP_129S1SvImJ_T0033008.1 MGP_129S1SvImJ_G0019286.1 mouse_genomes_project 11 108866105 108966363 + Tanc2 protein_coding processed_transcript MGP_129S1SvImJ_T0033009.1 MGP_129S1SvImJ_G0019286.1 mouse_genomes_project 11 108964349 108965639 + MGP_129S1SvImJ_P0033009 Tanc2 protein_coding protein_coding MGP_129S1SvImJ_T0033010.1 MGP_129S1SvImJ_G0019286.1 mouse_genomes_project 11 109032140 109185788 + MGP_129S1SvImJ_P0033010 Tanc2 protein_coding protein_coding MGP_129S1SvImJ_T0033011.1 MGP_129S1SvImJ_G0019286.1 mouse_genomes_project 11 109157534 109186187 + MGP_129S1SvImJ_P0033011 Tanc2 protein_coding protein_coding MGP_129S1SvImJ_T0033012.1 MGP_129S1SvImJ_G0019286.1 mouse_genomes_project 11 109164233 109178265 + Tanc2 protein_coding processed_transcript MGP_129S1SvImJ_T0028905.1 MGP_129S1SvImJ_G0018257.1 mouse_genomes_project 11 50119366 50128748 - MGP_129S1SvImJ_P0028905 Zfp354b protein_coding protein_coding MGP_129S1SvImJ_T0028906.1 MGP_129S1SvImJ_G0018257.1 mouse_genomes_project 11 50125687 50127764 - Zfp354b protein_coding processed_transcript MGP_129S1SvImJ_T0006195.1 MGP_129S1SvImJ_G0005175.1 mouse_genomes_project 11 16182594 16186756 - Gm28401 lincRNA lincRNA MGP_129S1SvImJ_T0006196.1 MGP_129S1SvImJ_G0005175.1 mouse_genomes_project 11 16182689 16186775 - Gm28401 lincRNA lincRNA MGP_129S1SvImJ_T0032268.1 MGP_129S1SvImJ_G0019098.1 mouse_genomes_project 11 102229706 102232437 - MGP_129S1SvImJ_P0032268 protein_coding protein_coding MGP_129S1SvImJ_T0029280.1 MGP_129S1SvImJ_G0018364.1 mouse_genomes_project 11 58350442 58358236 - MGP_129S1SvImJ_P0029280 2210407C18Rik protein_coding protein_coding MGP_129S1SvImJ_T0029281.1 MGP_129S1SvImJ_G0018364.1 mouse_genomes_project 11 58350447 58355662 - MGP_129S1SvImJ_P0029281 2210407C18Rik protein_coding protein_coding MGP_129S1SvImJ_T0029282.1 MGP_129S1SvImJ_G0018364.1 mouse_genomes_project 11 58354471 58355655 - 2210407C18Rik protein_coding processed_transcript MGP_129S1SvImJ_T0028413.1 MGP_129S1SvImJ_G0018117.1 mouse_genomes_project 11 29000775 29009773 + MGP_129S1SvImJ_P0028413 Gpr75 protein_coding protein_coding MGP_129S1SvImJ_T0030276.1 MGP_129S1SvImJ_G0018596.1 mouse_genomes_project 11 70988058 70994141 - MGP_129S1SvImJ_P0030276 Cxcl16 protein_coding protein_coding MGP_129S1SvImJ_T0030277.1 MGP_129S1SvImJ_G0018596.1 mouse_genomes_project 11 70988313 70993565 - MGP_129S1SvImJ_P0030277 Cxcl16 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030278.1 MGP_129S1SvImJ_G0018596.1 mouse_genomes_project 11 70988985 70993989 - Cxcl16 protein_coding retained_intron MGP_129S1SvImJ_T0030815.1 MGP_129S1SvImJ_G0018734.1 mouse_genomes_project 11 77236956 77245383 + MGP_129S1SvImJ_P0030815 Timm22 protein_coding protein_coding MGP_129S1SvImJ_T0030816.1 MGP_129S1SvImJ_G0018734.1 mouse_genomes_project 11 77237147 77247346 + MGP_129S1SvImJ_P0030816 Timm22 protein_coding protein_coding MGP_129S1SvImJ_T0030817.1 MGP_129S1SvImJ_G0018734.1 mouse_genomes_project 11 77237195 77245136 + MGP_129S1SvImJ_P0030817 Timm22 protein_coding protein_coding MGP_129S1SvImJ_T0030818.1 MGP_129S1SvImJ_G0018734.1 mouse_genomes_project 11 77237209 77240977 + MGP_129S1SvImJ_P0030818 Timm22 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028273.1 MGP_129S1SvImJ_G0018088.1 mouse_genomes_project 11 21279139 21284819 - MGP_129S1SvImJ_P0028273 1700093K21Rik protein_coding protein_coding MGP_129S1SvImJ_T0028274.1 MGP_129S1SvImJ_G0018088.1 mouse_genomes_project 11 21279139 21284100 - MGP_129S1SvImJ_P0028274 1700093K21Rik protein_coding protein_coding MGP_129S1SvImJ_T0028275.1 MGP_129S1SvImJ_G0018088.1 mouse_genomes_project 11 21283664 21284819 - MGP_129S1SvImJ_P0028275 1700093K21Rik protein_coding protein_coding MGP_129S1SvImJ_T0028276.1 MGP_129S1SvImJ_G0018088.1 mouse_genomes_project 11 21283693 21286032 - MGP_129S1SvImJ_P0028276 1700093K21Rik protein_coding protein_coding MGP_129S1SvImJ_T0031127.1 MGP_129S1SvImJ_G0018804.1 mouse_genomes_project 11 81180744 81216219 - MGP_129S1SvImJ_P0031127 Crlf3 protein_coding protein_coding MGP_129S1SvImJ_T0031128.1 MGP_129S1SvImJ_G0018804.1 mouse_genomes_project 11 81181735 81216236 - MGP_129S1SvImJ_P0031128 Crlf3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031129.1 MGP_129S1SvImJ_G0018804.1 mouse_genomes_project 11 81181735 81216219 - MGP_129S1SvImJ_P0031129 Crlf3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031130.1 MGP_129S1SvImJ_G0018804.1 mouse_genomes_project 11 81190350 81216243 - Crlf3 protein_coding processed_transcript MGP_129S1SvImJ_T0031131.1 MGP_129S1SvImJ_G0018804.1 mouse_genomes_project 11 81190472 81192155 - Crlf3 protein_coding retained_intron MGP_129S1SvImJ_T0031132.1 MGP_129S1SvImJ_G0018804.1 mouse_genomes_project 11 81193567 81216168 - MGP_129S1SvImJ_P0031132 Crlf3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031133.1 MGP_129S1SvImJ_G0018804.1 mouse_genomes_project 11 81197532 81216245 - Crlf3 protein_coding retained_intron MGP_129S1SvImJ_T0031056.1 MGP_129S1SvImJ_G0018784.1 mouse_genomes_project 11 79527026 79532007 - MGP_129S1SvImJ_P0031056 Tmem199 protein_coding protein_coding MGP_129S1SvImJ_T0031057.1 MGP_129S1SvImJ_G0018784.1 mouse_genomes_project 11 79527223 79528790 - Tmem199 protein_coding retained_intron MGP_129S1SvImJ_T0031058.1 MGP_129S1SvImJ_G0018784.1 mouse_genomes_project 11 79528479 79531880 - Tmem199 protein_coding retained_intron MGP_129S1SvImJ_T0031059.1 MGP_129S1SvImJ_G0018784.1 mouse_genomes_project 11 79529348 79531918 - Tmem199 protein_coding retained_intron MGP_129S1SvImJ_T0033966.1 MGP_129S1SvImJ_G0019484.1 mouse_genomes_project 11 123949562 123958597 - MGP_129S1SvImJ_P0033966 Nptx1 protein_coding protein_coding MGP_129S1SvImJ_T0031032.1 MGP_129S1SvImJ_G0018776.1 mouse_genomes_project 11 79325488 79344890 + MGP_129S1SvImJ_P0031032 Pigs protein_coding protein_coding MGP_129S1SvImJ_T0009687.1 MGP_129S1SvImJ_G0007803.1 mouse_genomes_project 11 49400855 49400917 + Mir6919 miRNA miRNA MGP_129S1SvImJ_T0012579.1 MGP_129S1SvImJ_G0010668.1 mouse_genomes_project 11 34419500 34420236 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031968.1 MGP_129S1SvImJ_G0019020.1 mouse_genomes_project 11 99407701 99411722 + MGP_129S1SvImJ_P0031968 Scrn2 protein_coding protein_coding MGP_129S1SvImJ_T0031969.1 MGP_129S1SvImJ_G0019020.1 mouse_genomes_project 11 99407715 99408970 + Scrn2 protein_coding retained_intron MGP_129S1SvImJ_T0031970.1 MGP_129S1SvImJ_G0019020.1 mouse_genomes_project 11 99407764 99411714 + Scrn2 protein_coding retained_intron MGP_129S1SvImJ_T0031971.1 MGP_129S1SvImJ_G0019020.1 mouse_genomes_project 11 99407897 99410040 + MGP_129S1SvImJ_P0031971 Scrn2 protein_coding protein_coding MGP_129S1SvImJ_T0006228.1 MGP_129S1SvImJ_G0005201.1 mouse_genomes_project 11 30269460 30275428 - Gm12108 lincRNA lincRNA MGP_129S1SvImJ_T0033588.1 MGP_129S1SvImJ_G0019410.1 mouse_genomes_project 11 120102777 120111377 - MGP_129S1SvImJ_P0033588 H3f3b protein_coding protein_coding MGP_129S1SvImJ_T0033589.1 MGP_129S1SvImJ_G0019410.1 mouse_genomes_project 11 120102826 120105476 - MGP_129S1SvImJ_P0033589 H3f3b protein_coding protein_coding MGP_129S1SvImJ_T0033590.1 MGP_129S1SvImJ_G0019410.1 mouse_genomes_project 11 120104480 120105445 - H3f3b protein_coding processed_transcript MGP_129S1SvImJ_T0030855.1 MGP_129S1SvImJ_G0018743.1 mouse_genomes_project 11 77908545 77947094 - MGP_129S1SvImJ_P0030855 Nsrp1 protein_coding protein_coding MGP_129S1SvImJ_T0030856.1 MGP_129S1SvImJ_G0018743.1 mouse_genomes_project 11 77917216 77946696 - MGP_129S1SvImJ_P0030856 Nsrp1 protein_coding protein_coding MGP_129S1SvImJ_T0030857.1 MGP_129S1SvImJ_G0018743.1 mouse_genomes_project 11 77921075 77947094 - Nsrp1 protein_coding processed_transcript MGP_129S1SvImJ_T0031598.1 MGP_129S1SvImJ_G0018925.1 mouse_genomes_project 11 90581920 90605982 - MGP_129S1SvImJ_P0031598 Akap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031599.1 MGP_129S1SvImJ_G0018925.1 mouse_genomes_project 11 90581920 90605982 - MGP_129S1SvImJ_P0031599 Akap1 protein_coding protein_coding MGP_129S1SvImJ_T0031600.1 MGP_129S1SvImJ_G0018925.1 mouse_genomes_project 11 90581920 90620722 - MGP_129S1SvImJ_P0031600 Akap1 protein_coding protein_coding MGP_129S1SvImJ_T0031601.1 MGP_129S1SvImJ_G0018925.1 mouse_genomes_project 11 90582884 90619853 - MGP_129S1SvImJ_P0031601 Akap1 protein_coding protein_coding MGP_129S1SvImJ_T0031602.1 MGP_129S1SvImJ_G0018925.1 mouse_genomes_project 11 90589560 90594086 - Akap1 protein_coding retained_intron MGP_129S1SvImJ_T0031603.1 MGP_129S1SvImJ_G0018925.1 mouse_genomes_project 11 90591515 90598691 - MGP_129S1SvImJ_P0031603 Akap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028518.1 MGP_129S1SvImJ_G0018146.1 mouse_genomes_project 11 31911760 31938527 + MGP_129S1SvImJ_P0028518 D130052B06Rik protein_coding protein_coding MGP_129S1SvImJ_T0012686.1 MGP_129S1SvImJ_G0010775.1 mouse_genomes_project 11 75440451 75440619 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012802.1 MGP_129S1SvImJ_G0010891.1 mouse_genomes_project 11 125701390 125701845 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000875.1 MGP_129S1SvImJ_G0000808.1 mouse_genomes_project 11 98275623 98276446 - TEC TEC MGP_129S1SvImJ_T0029300.1 MGP_129S1SvImJ_G0018378.1 mouse_genomes_project 11 58623994 58638782 + MGP_129S1SvImJ_P0029300 Gm12258 protein_coding protein_coding MGP_129S1SvImJ_T0029301.1 MGP_129S1SvImJ_G0018378.1 mouse_genomes_project 11 58624028 58628224 + Gm12258 protein_coding processed_transcript MGP_129S1SvImJ_T0029459.1 MGP_129S1SvImJ_G0018419.1 mouse_genomes_project 11 60348451 60413680 + MGP_129S1SvImJ_P0029459 Myo15 protein_coding protein_coding MGP_129S1SvImJ_T0029460.1 MGP_129S1SvImJ_G0018419.1 mouse_genomes_project 11 60348451 60413680 + MGP_129S1SvImJ_P0029460 Myo15 protein_coding protein_coding MGP_129S1SvImJ_T0029461.1 MGP_129S1SvImJ_G0018419.1 mouse_genomes_project 11 60348451 60413680 + MGP_129S1SvImJ_P0029461 Myo15 protein_coding protein_coding MGP_129S1SvImJ_T0029462.1 MGP_129S1SvImJ_G0018419.1 mouse_genomes_project 11 60360591 60390408 + MGP_129S1SvImJ_P0029462 Myo15 protein_coding protein_coding MGP_129S1SvImJ_T0029463.1 MGP_129S1SvImJ_G0018419.1 mouse_genomes_project 11 60390229 60405206 + Myo15 protein_coding retained_intron MGP_129S1SvImJ_T0029589.1 MGP_129S1SvImJ_G0018445.1 mouse_genomes_project 11 61656630 61659398 + Fam83g protein_coding processed_transcript MGP_129S1SvImJ_T0029590.1 MGP_129S1SvImJ_G0018445.1 mouse_genomes_project 11 61656958 61682461 + MGP_129S1SvImJ_P0029590 Fam83g protein_coding protein_coding MGP_129S1SvImJ_T0028508.1 MGP_129S1SvImJ_G0018143.1 mouse_genomes_project 11 31503777 31637073 - MGP_129S1SvImJ_P0028508 Ranbp17 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0028509.1 MGP_129S1SvImJ_G0018143.1 mouse_genomes_project 11 31503781 31820866 - MGP_129S1SvImJ_P0028509 Ranbp17 protein_coding protein_coding MGP_129S1SvImJ_T0028512.1 MGP_129S1SvImJ_G0018143.1 mouse_genomes_project 11 31590645 31820762 - MGP_129S1SvImJ_P0028512 Ranbp17 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028513.1 MGP_129S1SvImJ_G0018143.1 mouse_genomes_project 11 31597018 31625036 - Ranbp17 protein_coding processed_transcript MGP_129S1SvImJ_T0028514.1 MGP_129S1SvImJ_G0018143.1 mouse_genomes_project 11 31777639 31820750 - MGP_129S1SvImJ_P0028514 Ranbp17 protein_coding protein_coding MGP_129S1SvImJ_T0028515.1 MGP_129S1SvImJ_G0018143.1 mouse_genomes_project 11 31791654 31820214 - MGP_129S1SvImJ_P0028515 Ranbp17 protein_coding protein_coding MGP_129S1SvImJ_T0009723.1 MGP_129S1SvImJ_G0007839.1 mouse_genomes_project 11 75904998 75905089 + Mir212 miRNA miRNA MGP_129S1SvImJ_T0003225.1 MGP_129S1SvImJ_G0002992.1 mouse_genomes_project 11 64155920 64158530 + Gm12289 antisense antisense MGP_129S1SvImJ_T0030627.1 MGP_129S1SvImJ_G0018693.1 mouse_genomes_project 11 75047079 75048074 + MGP_129S1SvImJ_P0030627 Olfr412 protein_coding protein_coding MGP_129S1SvImJ_T0028638.1 MGP_129S1SvImJ_G0018178.1 mouse_genomes_project 11 42514880 42535863 - MGP_129S1SvImJ_P0028638 Ttc1 protein_coding protein_coding MGP_129S1SvImJ_T0028639.1 MGP_129S1SvImJ_G0018178.1 mouse_genomes_project 11 42515377 42535837 - MGP_129S1SvImJ_P0028639 Ttc1 protein_coding protein_coding MGP_129S1SvImJ_T0028640.1 MGP_129S1SvImJ_G0018178.1 mouse_genomes_project 11 42531690 42535847 - Ttc1 protein_coding processed_transcript MGP_129S1SvImJ_T0028652.1 MGP_129S1SvImJ_G0018182.1 mouse_genomes_project 11 43360142 43409713 + MGP_129S1SvImJ_P0028652 Rnf145 protein_coding protein_coding MGP_129S1SvImJ_T0028653.1 MGP_129S1SvImJ_G0018182.1 mouse_genomes_project 11 43360161 43365530 + Rnf145 protein_coding processed_transcript MGP_129S1SvImJ_T0028654.1 MGP_129S1SvImJ_G0018182.1 mouse_genomes_project 11 43360620 43398429 + MGP_129S1SvImJ_P0028654 Rnf145 protein_coding protein_coding MGP_129S1SvImJ_T0028655.1 MGP_129S1SvImJ_G0018182.1 mouse_genomes_project 11 43361483 43392380 + Rnf145 protein_coding processed_transcript MGP_129S1SvImJ_T0028656.1 MGP_129S1SvImJ_G0018182.1 mouse_genomes_project 11 43400056 43403269 + Rnf145 protein_coding processed_transcript MGP_129S1SvImJ_T0028657.1 MGP_129S1SvImJ_G0018182.1 mouse_genomes_project 11 43403250 43405213 + Rnf145 protein_coding processed_transcript MGP_129S1SvImJ_T0006308.1 MGP_129S1SvImJ_G0005268.1 mouse_genomes_project 11 83898191 83901148 + Gm11426 lincRNA lincRNA MGP_129S1SvImJ_T0009745.1 MGP_129S1SvImJ_G0007861.1 mouse_genomes_project 11 93918927 93919001 - Gm22702 miRNA miRNA MGP_129S1SvImJ_T0031834.1 MGP_129S1SvImJ_G0018983.1 mouse_genomes_project 11 97610870 97694682 + MGP_129S1SvImJ_P0031834 Spop protein_coding protein_coding MGP_129S1SvImJ_T0031835.1 MGP_129S1SvImJ_G0018983.1 mouse_genomes_project 11 97610910 97673870 + MGP_129S1SvImJ_P0031835 Spop protein_coding protein_coding MGP_129S1SvImJ_T0031836.1 MGP_129S1SvImJ_G0018983.1 mouse_genomes_project 11 97610999 97673849 + MGP_129S1SvImJ_P0031836 Spop protein_coding protein_coding MGP_129S1SvImJ_T0031837.1 MGP_129S1SvImJ_G0018983.1 mouse_genomes_project 11 97610999 97694682 + MGP_129S1SvImJ_P0031837 Spop protein_coding protein_coding MGP_129S1SvImJ_T0031838.1 MGP_129S1SvImJ_G0018983.1 mouse_genomes_project 11 97673853 97691591 + Spop protein_coding processed_transcript MGP_129S1SvImJ_T0034113.1 MGP_129S1SvImJ_G0019514.1 mouse_genomes_project 11 125084918 125085535 + MGP_129S1SvImJ_P0034113 Npb protein_coding protein_coding MGP_129S1SvImJ_T0034114.1 MGP_129S1SvImJ_G0019514.1 mouse_genomes_project 11 125084918 125085535 + MGP_129S1SvImJ_P0034114 Npb protein_coding protein_coding MGP_129S1SvImJ_T0034115.1 MGP_129S1SvImJ_G0019514.1 mouse_genomes_project 11 125084946 125085475 + MGP_129S1SvImJ_P0034115 Npb protein_coding protein_coding MGP_129S1SvImJ_T0012776.1 MGP_129S1SvImJ_G0010865.1 mouse_genomes_project 11 111890750 111891234 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003204.1 MGP_129S1SvImJ_G0002975.1 mouse_genomes_project 11 59803948 59805202 - Med9os antisense antisense MGP_129S1SvImJ_T0003205.1 MGP_129S1SvImJ_G0002975.1 mouse_genomes_project 11 59803948 59805151 - Med9os antisense antisense MGP_129S1SvImJ_T0003206.1 MGP_129S1SvImJ_G0002975.1 mouse_genomes_project 11 59803948 59805201 - Med9os antisense antisense MGP_129S1SvImJ_T0003168.1 MGP_129S1SvImJ_G0002943.1 mouse_genomes_project 11 45047071 45050398 - Gm16033 antisense antisense MGP_129S1SvImJ_T0029289.1 MGP_129S1SvImJ_G0018370.1 mouse_genomes_project 11 58461919 58462942 + MGP_129S1SvImJ_P0029289 Olfr319 protein_coding protein_coding MGP_129S1SvImJ_T0100479.1 MGP_129S1SvImJ_G0038546.1 mouse_genomes_project 11 8695040 8695168 - Gm26458 snoRNA snoRNA MGP_129S1SvImJ_T0011818.1 MGP_129S1SvImJ_G0009931.1 mouse_genomes_project 11 74616445 74620390 + MGP_129S1SvImJ_P0011818 Olfr396-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0011819.1 MGP_129S1SvImJ_G0009931.1 mouse_genomes_project 11 74619670 74620303 + MGP_129S1SvImJ_P0011819 Olfr396-ps1 polymorphic_pseudogene protein_coding MGP_129S1SvImJ_T0029473.1 MGP_129S1SvImJ_G0018423.1 mouse_genomes_project 11 60642873 60647427 + MGP_129S1SvImJ_P0029473 Mief2 protein_coding protein_coding MGP_129S1SvImJ_T0029474.1 MGP_129S1SvImJ_G0018423.1 mouse_genomes_project 11 60642918 60645472 + Mief2 protein_coding retained_intron MGP_129S1SvImJ_T0029475.1 MGP_129S1SvImJ_G0018423.1 mouse_genomes_project 11 60642920 60645139 + Mief2 protein_coding processed_transcript MGP_129S1SvImJ_T0032586.1 MGP_129S1SvImJ_G0019207.1 mouse_genomes_project 11 104434436 104441930 + MGP_129S1SvImJ_P0032586 Nbr1 protein_coding protein_coding MGP_129S1SvImJ_T0032587.1 MGP_129S1SvImJ_G0019207.1 mouse_genomes_project 11 104435060 104466518 + MGP_129S1SvImJ_P0032587 Nbr1 protein_coding protein_coding MGP_129S1SvImJ_T0032588.1 MGP_129S1SvImJ_G0019207.1 mouse_genomes_project 11 104435060 104466518 + MGP_129S1SvImJ_P0032588 Nbr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032589.1 MGP_129S1SvImJ_G0019207.1 mouse_genomes_project 11 104435069 104452254 + Nbr1 protein_coding processed_transcript MGP_129S1SvImJ_T0032590.1 MGP_129S1SvImJ_G0019207.1 mouse_genomes_project 11 104435082 104466517 + MGP_129S1SvImJ_P0032590 Nbr1 protein_coding protein_coding MGP_129S1SvImJ_T0032591.1 MGP_129S1SvImJ_G0019207.1 mouse_genomes_project 11 104435084 104466517 + MGP_129S1SvImJ_P0032591 Nbr1 protein_coding protein_coding MGP_129S1SvImJ_T0032592.1 MGP_129S1SvImJ_G0019207.1 mouse_genomes_project 11 104435103 104441929 + MGP_129S1SvImJ_P0032592 Nbr1 protein_coding protein_coding MGP_129S1SvImJ_T0032593.1 MGP_129S1SvImJ_G0019207.1 mouse_genomes_project 11 104438075 104441946 + MGP_129S1SvImJ_P0032593 Nbr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032594.1 MGP_129S1SvImJ_G0019207.1 mouse_genomes_project 11 104438381 104465579 + MGP_129S1SvImJ_P0032594 Nbr1 protein_coding protein_coding MGP_129S1SvImJ_T0032595.1 MGP_129S1SvImJ_G0019207.1 mouse_genomes_project 11 104441902 104441965 + Nbr1 protein_coding misc_RNA MGP_129S1SvImJ_T0032596.1 MGP_129S1SvImJ_G0019207.1 mouse_genomes_project 11 104444169 104448322 + Nbr1 protein_coding retained_intron MGP_129S1SvImJ_T0032597.1 MGP_129S1SvImJ_G0019207.1 mouse_genomes_project 11 104448573 104452160 + Nbr1 protein_coding retained_intron MGP_129S1SvImJ_T0032598.1 MGP_129S1SvImJ_G0019207.1 mouse_genomes_project 11 104452007 104453117 + Nbr1 protein_coding retained_intron MGP_129S1SvImJ_T0032599.1 MGP_129S1SvImJ_G0019207.1 mouse_genomes_project 11 104452400 104453126 + Nbr1 protein_coding processed_transcript MGP_129S1SvImJ_T0032600.1 MGP_129S1SvImJ_G0019207.1 mouse_genomes_project 11 104456791 104459781 + Nbr1 protein_coding retained_intron MGP_129S1SvImJ_T0032601.1 MGP_129S1SvImJ_G0019207.1 mouse_genomes_project 11 104459671 104461196 + Nbr1 protein_coding retained_intron MGP_129S1SvImJ_T0032602.1 MGP_129S1SvImJ_G0019207.1 mouse_genomes_project 11 104462388 104465355 + Nbr1 protein_coding retained_intron MGP_129S1SvImJ_T0031629.1 MGP_129S1SvImJ_G0018938.1 mouse_genomes_project 11 92153885 92213333 - MGP_129S1SvImJ_P0031629 Hlf protein_coding protein_coding MGP_129S1SvImJ_T0031630.1 MGP_129S1SvImJ_G0018938.1 mouse_genomes_project 11 92156338 92212124 - Hlf protein_coding processed_transcript MGP_129S1SvImJ_T0031631.1 MGP_129S1SvImJ_G0018938.1 mouse_genomes_project 11 92156490 92210606 - Hlf protein_coding processed_transcript MGP_129S1SvImJ_T0031632.1 MGP_129S1SvImJ_G0018938.1 mouse_genomes_project 11 92158176 92203472 - Hlf protein_coding processed_transcript MGP_129S1SvImJ_T0031633.1 MGP_129S1SvImJ_G0018938.1 mouse_genomes_project 11 92162903 92210369 - MGP_129S1SvImJ_P0031633 Hlf protein_coding protein_coding MGP_129S1SvImJ_T0031634.1 MGP_129S1SvImJ_G0018938.1 mouse_genomes_project 11 92210318 92212024 - Hlf protein_coding processed_transcript MGP_129S1SvImJ_T0029004.1 MGP_129S1SvImJ_G0018284.1 mouse_genomes_project 11 51678001 51707186 + MGP_129S1SvImJ_P0029004 Vdac1 protein_coding protein_coding MGP_129S1SvImJ_T0029005.1 MGP_129S1SvImJ_G0018284.1 mouse_genomes_project 11 51678276 51706285 + MGP_129S1SvImJ_P0029005 Vdac1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029006.1 MGP_129S1SvImJ_G0018284.1 mouse_genomes_project 11 51691122 51693798 + Vdac1 protein_coding processed_transcript MGP_129S1SvImJ_T0029007.1 MGP_129S1SvImJ_G0018284.1 mouse_genomes_project 11 51691285 51706312 + MGP_129S1SvImJ_P0029007 Vdac1 protein_coding protein_coding MGP_129S1SvImJ_T0029008.1 MGP_129S1SvImJ_G0018284.1 mouse_genomes_project 11 51704985 51706580 + Vdac1 protein_coding retained_intron MGP_129S1SvImJ_T0012598.1 MGP_129S1SvImJ_G0010687.1 mouse_genomes_project 11 47560480 47561752 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032354.1 MGP_129S1SvImJ_G0019155.1 mouse_genomes_project 11 103182012 103202550 - MGP_129S1SvImJ_P0032354 Nt5c3b protein_coding protein_coding MGP_129S1SvImJ_T0032355.1 MGP_129S1SvImJ_G0019155.1 mouse_genomes_project 11 103182012 103203256 - MGP_129S1SvImJ_P0032355 Nt5c3b protein_coding protein_coding MGP_129S1SvImJ_T0032357.1 MGP_129S1SvImJ_G0019155.1 mouse_genomes_project 11 103191371 103202516 - MGP_129S1SvImJ_P0032357 Nt5c3b protein_coding protein_coding MGP_129S1SvImJ_T0032358.1 MGP_129S1SvImJ_G0019155.1 mouse_genomes_project 11 103191438 103193067 - Nt5c3b protein_coding processed_transcript MGP_129S1SvImJ_T0032359.1 MGP_129S1SvImJ_G0019155.1 mouse_genomes_project 11 103194416 103202377 - Nt5c3b protein_coding processed_transcript MGP_129S1SvImJ_T0032360.1 MGP_129S1SvImJ_G0019155.1 mouse_genomes_project 11 103194453 103202534 - Nt5c3b protein_coding processed_transcript MGP_129S1SvImJ_T0032361.1 MGP_129S1SvImJ_G0019155.1 mouse_genomes_project 11 103195203 103202477 - Nt5c3b protein_coding processed_transcript MGP_129S1SvImJ_T0032362.1 MGP_129S1SvImJ_G0019155.1 mouse_genomes_project 11 103199752 103202390 - Nt5c3b protein_coding processed_transcript MGP_129S1SvImJ_T0032363.1 MGP_129S1SvImJ_G0019155.1 mouse_genomes_project 11 103201013 103202388 - Nt5c3b protein_coding processed_transcript MGP_129S1SvImJ_T0100478.1 MGP_129S1SvImJ_G0038545.1 mouse_genomes_project 11 5236725 5236800 - Gm24051 snoRNA snoRNA MGP_129S1SvImJ_T0003336.1 MGP_129S1SvImJ_G0003080.1 mouse_genomes_project 11 109336864 109338096 - Taco1os antisense antisense MGP_129S1SvImJ_T0028071.1 MGP_129S1SvImJ_G0018043.1 mouse_genomes_project 11 8561828 8739011 - MGP_129S1SvImJ_P0028071 Zpbp protein_coding protein_coding MGP_129S1SvImJ_T0003248.1 MGP_129S1SvImJ_G0003010.1 mouse_genomes_project 11 77872702 77873662 - Gm12343 antisense antisense MGP_129S1SvImJ_T0032962.1 MGP_129S1SvImJ_G0019277.1 mouse_genomes_project 11 107709645 107758886 + MGP_129S1SvImJ_P0032962 Myl4 protein_coding protein_coding MGP_129S1SvImJ_T0032963.1 MGP_129S1SvImJ_G0019277.1 mouse_genomes_project 11 107740951 107757418 + MGP_129S1SvImJ_P0032963 Myl4 protein_coding protein_coding MGP_129S1SvImJ_T0032964.1 MGP_129S1SvImJ_G0019277.1 mouse_genomes_project 11 107745156 107758886 + MGP_129S1SvImJ_P0032964 Myl4 protein_coding protein_coding MGP_129S1SvImJ_T0032965.1 MGP_129S1SvImJ_G0019277.1 mouse_genomes_project 11 107745188 107756684 + MGP_129S1SvImJ_P0032965 Myl4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032966.1 MGP_129S1SvImJ_G0019277.1 mouse_genomes_project 11 107745452 107758886 + MGP_129S1SvImJ_P0032966 Myl4 protein_coding protein_coding MGP_129S1SvImJ_T0032967.1 MGP_129S1SvImJ_G0019277.1 mouse_genomes_project 11 107748499 107758880 + Myl4 protein_coding retained_intron MGP_129S1SvImJ_T0032968.1 MGP_129S1SvImJ_G0019277.1 mouse_genomes_project 11 107750212 107758017 + Myl4 protein_coding retained_intron MGP_129S1SvImJ_T0032969.1 MGP_129S1SvImJ_G0019277.1 mouse_genomes_project 11 107756633 107767424 + MGP_129S1SvImJ_P0032969 Myl4 protein_coding protein_coding MGP_129S1SvImJ_T0028707.1 MGP_129S1SvImJ_G0018199.1 mouse_genomes_project 11 45558637 45630183 - MGP_129S1SvImJ_P0028707 Timd2 protein_coding protein_coding MGP_129S1SvImJ_T0028708.1 MGP_129S1SvImJ_G0018199.1 mouse_genomes_project 11 45609742 45648723 - MGP_129S1SvImJ_P0028708 Timd2 protein_coding protein_coding MGP_129S1SvImJ_T0028709.1 MGP_129S1SvImJ_G0018199.1 mouse_genomes_project 11 45609742 45638683 - MGP_129S1SvImJ_P0028709 Timd2 protein_coding protein_coding MGP_129S1SvImJ_T0028710.1 MGP_129S1SvImJ_G0018199.1 mouse_genomes_project 11 45626861 45648725 - MGP_129S1SvImJ_P0028710 Timd2 protein_coding protein_coding MGP_129S1SvImJ_T0029290.1 MGP_129S1SvImJ_G0018371.1 mouse_genomes_project 11 58496802 58498040 - MGP_129S1SvImJ_P0029290 protein_coding protein_coding MGP_129S1SvImJ_T0029310.1 MGP_129S1SvImJ_G0018383.1 mouse_genomes_project 11 58730656 58731270 + MGP_129S1SvImJ_P0029310 Hist3h2ba protein_coding protein_coding MGP_129S1SvImJ_T0029905.1 MGP_129S1SvImJ_G0018515.1 mouse_genomes_project 11 69465592 69467454 + MGP_129S1SvImJ_P0029905 Borcs6 protein_coding protein_coding MGP_129S1SvImJ_T0027824.1 MGP_129S1SvImJ_G0017987.1 mouse_genomes_project 11 1681491 1719590 + MGP_129S1SvImJ_P0027824 Zmat5 protein_coding protein_coding MGP_129S1SvImJ_T0027825.1 MGP_129S1SvImJ_G0017987.1 mouse_genomes_project 11 1681521 1719316 + Zmat5 protein_coding processed_transcript MGP_129S1SvImJ_T0027826.1 MGP_129S1SvImJ_G0017987.1 mouse_genomes_project 11 1708234 1712181 + Zmat5 protein_coding processed_transcript MGP_129S1SvImJ_T0028359.1 MGP_129S1SvImJ_G0018107.1 mouse_genomes_project 11 27516484 27519759 - MGP_129S1SvImJ_P0028359 Prorsd1 protein_coding protein_coding MGP_129S1SvImJ_T0028360.1 MGP_129S1SvImJ_G0018107.1 mouse_genomes_project 11 27517603 27519761 - MGP_129S1SvImJ_P0028360 Prorsd1 protein_coding protein_coding MGP_129S1SvImJ_T0028974.1 MGP_129S1SvImJ_G0018279.1 mouse_genomes_project 11 51268580 51284761 - MGP_129S1SvImJ_P0028974 Ube2b protein_coding protein_coding MGP_129S1SvImJ_T0028975.1 MGP_129S1SvImJ_G0018279.1 mouse_genomes_project 11 51269750 51285039 - MGP_129S1SvImJ_P0028975 Ube2b protein_coding protein_coding MGP_129S1SvImJ_T0028976.1 MGP_129S1SvImJ_G0018279.1 mouse_genomes_project 11 51281844 51284756 - Ube2b protein_coding processed_transcript MGP_129S1SvImJ_T0028977.1 MGP_129S1SvImJ_G0018279.1 mouse_genomes_project 11 51281920 51285039 - Ube2b protein_coding processed_transcript MGP_129S1SvImJ_T0028285.1 MGP_129S1SvImJ_G0018091.1 mouse_genomes_project 11 21436999 21508355 + MGP_129S1SvImJ_P0028285 Pus10 protein_coding protein_coding MGP_129S1SvImJ_T0028286.1 MGP_129S1SvImJ_G0018091.1 mouse_genomes_project 11 21437022 21507004 + MGP_129S1SvImJ_P0028286 Pus10 protein_coding protein_coding MGP_129S1SvImJ_T0028287.1 MGP_129S1SvImJ_G0018091.1 mouse_genomes_project 11 21437332 21508355 + MGP_129S1SvImJ_P0028287 Pus10 protein_coding protein_coding MGP_129S1SvImJ_T0028288.1 MGP_129S1SvImJ_G0018091.1 mouse_genomes_project 11 21437513 21448570 + Pus10 protein_coding retained_intron MGP_129S1SvImJ_T0028289.1 MGP_129S1SvImJ_G0018091.1 mouse_genomes_project 11 21437836 21448456 + MGP_129S1SvImJ_P0028289 Pus10 protein_coding protein_coding MGP_129S1SvImJ_T0028290.1 MGP_129S1SvImJ_G0018091.1 mouse_genomes_project 11 21493077 21504550 + Pus10 protein_coding retained_intron MGP_129S1SvImJ_T0028291.1 MGP_129S1SvImJ_G0018091.1 mouse_genomes_project 11 21494151 21506877 + Pus10 protein_coding retained_intron MGP_129S1SvImJ_T0099268.1 MGP_129S1SvImJ_G0037335.1 mouse_genomes_project 11 87991273 87991379 - Gm26439 snRNA snRNA MGP_129S1SvImJ_T0032825.1 MGP_129S1SvImJ_G0019246.1 mouse_genomes_project 11 105869561 105911554 - MGP_129S1SvImJ_P0032825 Eftud2 protein_coding protein_coding MGP_129S1SvImJ_T0032826.1 MGP_129S1SvImJ_G0019246.1 mouse_genomes_project 11 105869561 105911572 - MGP_129S1SvImJ_P0032826 Eftud2 protein_coding protein_coding MGP_129S1SvImJ_T0032827.1 MGP_129S1SvImJ_G0019246.1 mouse_genomes_project 11 105869565 105875312 - MGP_129S1SvImJ_P0032827 Eftud2 protein_coding protein_coding MGP_129S1SvImJ_T0032828.1 MGP_129S1SvImJ_G0019246.1 mouse_genomes_project 11 105869889 105908299 - MGP_129S1SvImJ_P0032828 Eftud2 protein_coding protein_coding MGP_129S1SvImJ_T0032829.1 MGP_129S1SvImJ_G0019246.1 mouse_genomes_project 11 105869926 105872333 - MGP_129S1SvImJ_P0032829 Eftud2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032830.1 MGP_129S1SvImJ_G0019246.1 mouse_genomes_project 11 105870538 105871764 - Eftud2 protein_coding retained_intron MGP_129S1SvImJ_T0032831.1 MGP_129S1SvImJ_G0019246.1 mouse_genomes_project 11 105871299 105879071 - Eftud2 protein_coding retained_intron MGP_129S1SvImJ_T0032832.1 MGP_129S1SvImJ_G0019246.1 mouse_genomes_project 11 105880285 105891319 - Eftud2 protein_coding retained_intron MGP_129S1SvImJ_T0032833.1 MGP_129S1SvImJ_G0019246.1 mouse_genomes_project 11 105893706 105908275 - MGP_129S1SvImJ_P0032833 Eftud2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032834.1 MGP_129S1SvImJ_G0019246.1 mouse_genomes_project 11 105894975 105897102 - Eftud2 protein_coding retained_intron MGP_129S1SvImJ_T0032835.1 MGP_129S1SvImJ_G0019246.1 mouse_genomes_project 11 105896994 105911551 - Eftud2 protein_coding retained_intron MGP_129S1SvImJ_T0032836.1 MGP_129S1SvImJ_G0019246.1 mouse_genomes_project 11 105901066 105908300 - Eftud2 protein_coding retained_intron MGP_129S1SvImJ_T0032837.1 MGP_129S1SvImJ_G0019246.1 mouse_genomes_project 11 105907548 105911522 - Eftud2 protein_coding retained_intron MGP_129S1SvImJ_T0009668.1 MGP_129S1SvImJ_G0007784.1 mouse_genomes_project 11 21256767 21256858 - miRNA miRNA MGP_129S1SvImJ_T0033075.1 MGP_129S1SvImJ_G0019306.1 mouse_genomes_project 11 109657047 109666600 + MGP_129S1SvImJ_P0033075 Prr29 protein_coding protein_coding MGP_129S1SvImJ_T0033076.1 MGP_129S1SvImJ_G0019306.1 mouse_genomes_project 11 109664330 109667044 + MGP_129S1SvImJ_P0033076 Prr29 protein_coding protein_coding MGP_129S1SvImJ_T0033077.1 MGP_129S1SvImJ_G0019306.1 mouse_genomes_project 11 109664330 109666834 + MGP_129S1SvImJ_P0033077 Prr29 protein_coding protein_coding MGP_129S1SvImJ_T0033078.1 MGP_129S1SvImJ_G0019306.1 mouse_genomes_project 11 109664343 109666407 + MGP_129S1SvImJ_P0033078 Prr29 protein_coding protein_coding MGP_129S1SvImJ_T0012483.1 MGP_129S1SvImJ_G0010572.1 mouse_genomes_project 11 3573795 3574083 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031040.1 MGP_129S1SvImJ_G0018778.1 mouse_genomes_project 11 79360723 79391427 - MGP_129S1SvImJ_P0031040 Foxn1 protein_coding protein_coding MGP_129S1SvImJ_T0028277.1 MGP_129S1SvImJ_G0018089.1 mouse_genomes_project 11 21324800 21401931 - MGP_129S1SvImJ_P0028277 0610010F05Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028278.1 MGP_129S1SvImJ_G0018089.1 mouse_genomes_project 11 21334441 21401989 - MGP_129S1SvImJ_P0028278 0610010F05Rik protein_coding protein_coding MGP_129S1SvImJ_T0028279.1 MGP_129S1SvImJ_G0018089.1 mouse_genomes_project 11 21337830 21359588 - MGP_129S1SvImJ_P0028279 0610010F05Rik protein_coding protein_coding MGP_129S1SvImJ_T0028280.1 MGP_129S1SvImJ_G0018089.1 mouse_genomes_project 11 21397258 21402013 - MGP_129S1SvImJ_P0028280 0610010F05Rik protein_coding protein_coding MGP_129S1SvImJ_T0029868.1 MGP_129S1SvImJ_G0018510.1 mouse_genomes_project 11 69359446 69363867 + MGP_129S1SvImJ_P0029868 Slc25a35 protein_coding protein_coding MGP_129S1SvImJ_T0029869.1 MGP_129S1SvImJ_G0018510.1 mouse_genomes_project 11 69359462 69363133 + Slc25a35 protein_coding processed_transcript MGP_129S1SvImJ_T0029870.1 MGP_129S1SvImJ_G0018510.1 mouse_genomes_project 11 69359463 69366139 + MGP_129S1SvImJ_P0029870 Slc25a35 protein_coding protein_coding MGP_129S1SvImJ_T0033084.1 MGP_129S1SvImJ_G0019308.1 mouse_genomes_project 11 109685700 109787329 - MGP_129S1SvImJ_P0033084 Ern1 protein_coding protein_coding MGP_129S1SvImJ_T0033085.1 MGP_129S1SvImJ_G0019308.1 mouse_genomes_project 11 109688501 109787385 - Ern1 protein_coding processed_transcript MGP_129S1SvImJ_T0033086.1 MGP_129S1SvImJ_G0019308.1 mouse_genomes_project 11 109704810 109787369 - MGP_129S1SvImJ_P0033086 Ern1 protein_coding protein_coding MGP_129S1SvImJ_T0033087.1 MGP_129S1SvImJ_G0019308.1 mouse_genomes_project 11 109725643 109787341 - MGP_129S1SvImJ_P0033087 Ern1 protein_coding protein_coding MGP_129S1SvImJ_T0033088.1 MGP_129S1SvImJ_G0019308.1 mouse_genomes_project 11 109752235 109787336 - MGP_129S1SvImJ_P0033088 Ern1 protein_coding protein_coding MGP_129S1SvImJ_T0029093.1 MGP_129S1SvImJ_G0018309.1 mouse_genomes_project 11 53432722 53479295 - MGP_129S1SvImJ_P0029093 Slc22a4 protein_coding protein_coding MGP_129S1SvImJ_T0029094.1 MGP_129S1SvImJ_G0018309.1 mouse_genomes_project 11 53441658 53459090 - Slc22a4 protein_coding processed_transcript MGP_129S1SvImJ_T0029095.1 MGP_129S1SvImJ_G0018309.1 mouse_genomes_project 11 53465375 53479157 - Slc22a4 protein_coding processed_transcript MGP_129S1SvImJ_T0032408.1 MGP_129S1SvImJ_G0019165.1 mouse_genomes_project 11 103470239 103477667 - Kat2a protein_coding processed_transcript MGP_129S1SvImJ_T0032409.1 MGP_129S1SvImJ_G0019165.1 mouse_genomes_project 11 103470239 103477943 - Kat2a protein_coding processed_transcript MGP_129S1SvImJ_T0032410.1 MGP_129S1SvImJ_G0019165.1 mouse_genomes_project 11 103470239 103477959 - MGP_129S1SvImJ_P0032410 Kat2a protein_coding protein_coding MGP_129S1SvImJ_T0032411.1 MGP_129S1SvImJ_G0019165.1 mouse_genomes_project 11 103470239 103477959 - MGP_129S1SvImJ_P0032411 Kat2a protein_coding protein_coding MGP_129S1SvImJ_T0034116.1 MGP_129S1SvImJ_G0019515.1 mouse_genomes_project 11 125086542 125097993 - MGP_129S1SvImJ_P0034116 Pcyt2 protein_coding protein_coding MGP_129S1SvImJ_T0034117.1 MGP_129S1SvImJ_G0019515.1 mouse_genomes_project 11 125087222 125092585 - MGP_129S1SvImJ_P0034117 Pcyt2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034118.1 MGP_129S1SvImJ_G0019515.1 mouse_genomes_project 11 125087593 125097982 - MGP_129S1SvImJ_P0034118 Pcyt2 protein_coding protein_coding MGP_129S1SvImJ_T0034119.1 MGP_129S1SvImJ_G0019515.1 mouse_genomes_project 11 125090816 125092254 - Pcyt2 protein_coding retained_intron MGP_129S1SvImJ_T0034120.1 MGP_129S1SvImJ_G0019515.1 mouse_genomes_project 11 125091020 125092226 - Pcyt2 protein_coding retained_intron MGP_129S1SvImJ_T0034121.1 MGP_129S1SvImJ_G0019515.1 mouse_genomes_project 11 125091772 125093219 - Pcyt2 protein_coding retained_intron MGP_129S1SvImJ_T0034122.1 MGP_129S1SvImJ_G0019515.1 mouse_genomes_project 11 125092349 125097965 - Pcyt2 protein_coding retained_intron MGP_129S1SvImJ_T0034123.1 MGP_129S1SvImJ_G0019515.1 mouse_genomes_project 11 125092740 125093840 - Pcyt2 protein_coding retained_intron MGP_129S1SvImJ_T0034124.1 MGP_129S1SvImJ_G0019515.1 mouse_genomes_project 11 125093079 125093734 - Pcyt2 protein_coding retained_intron MGP_129S1SvImJ_T0034125.1 MGP_129S1SvImJ_G0019515.1 mouse_genomes_project 11 125093121 125094670 - Pcyt2 protein_coding retained_intron MGP_129S1SvImJ_T0034126.1 MGP_129S1SvImJ_G0019515.1 mouse_genomes_project 11 125093174 125097970 - Pcyt2 protein_coding processed_transcript MGP_129S1SvImJ_T0034127.1 MGP_129S1SvImJ_G0019515.1 mouse_genomes_project 11 125095232 125097967 - Pcyt2 protein_coding retained_intron MGP_129S1SvImJ_T0034128.1 MGP_129S1SvImJ_G0019515.1 mouse_genomes_project 11 125095503 125097926 - Pcyt2 protein_coding retained_intron MGP_129S1SvImJ_T0006280.1 MGP_129S1SvImJ_G0005247.1 mouse_genomes_project 11 71166957 71169492 - Gm12315 lincRNA lincRNA MGP_129S1SvImJ_T0032254.1 MGP_129S1SvImJ_G0019087.1 mouse_genomes_project 11 101971687 101980471 - MGP_129S1SvImJ_P0032254 Krt25 protein_coding protein_coding MGP_129S1SvImJ_T0098444.1 MGP_129S1SvImJ_G0036529.1 mouse_genomes_project 11 8416069 8416199 + Gm23065 rRNA rRNA MGP_129S1SvImJ_T0017215.1 MGP_129S1SvImJ_G0015168.1 mouse_genomes_project 11 47874072 47884029 - Gm16170 processed_transcript processed_transcript MGP_129S1SvImJ_T0012751.1 MGP_129S1SvImJ_G0010840.1 mouse_genomes_project 11 102723637 102724096 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029028.1 MGP_129S1SvImJ_G0018290.1 mouse_genomes_project 11 52803580 52804570 - MGP_129S1SvImJ_P0029028 Leap2 protein_coding protein_coding MGP_129S1SvImJ_T0000874.1 MGP_129S1SvImJ_G0000807.1 mouse_genomes_project 11 85595567 85598942 + TEC TEC MGP_129S1SvImJ_T0030480.1 MGP_129S1SvImJ_G0018636.1 mouse_genomes_project 11 72933232 72938208 + MGP_129S1SvImJ_P0030480 Fbxo39 protein_coding protein_coding MGP_129S1SvImJ_T0033122.1 MGP_129S1SvImJ_G0019314.1 mouse_genomes_project 11 110126081 110156518 + MGP_129S1SvImJ_P0033122 Cep95 protein_coding protein_coding MGP_129S1SvImJ_T0033123.1 MGP_129S1SvImJ_G0019314.1 mouse_genomes_project 11 110126104 110156511 + MGP_129S1SvImJ_P0033123 Cep95 protein_coding protein_coding MGP_129S1SvImJ_T0033124.1 MGP_129S1SvImJ_G0019314.1 mouse_genomes_project 11 110126116 110128098 + Cep95 protein_coding processed_transcript MGP_129S1SvImJ_T0033125.1 MGP_129S1SvImJ_G0019314.1 mouse_genomes_project 11 110149970 110151497 + Cep95 protein_coding processed_transcript MGP_129S1SvImJ_T0033126.1 MGP_129S1SvImJ_G0019314.1 mouse_genomes_project 11 110151880 110153436 + Cep95 protein_coding processed_transcript MGP_129S1SvImJ_T0033127.1 MGP_129S1SvImJ_G0019314.1 mouse_genomes_project 11 110155491 110156519 + Cep95 protein_coding processed_transcript MGP_129S1SvImJ_T0033128.1 MGP_129S1SvImJ_G0019314.1 mouse_genomes_project 11 110155536 110157588 + MGP_129S1SvImJ_P0033128 Cep95 protein_coding protein_coding MGP_129S1SvImJ_T0017233.1 MGP_129S1SvImJ_G0015177.1 mouse_genomes_project 11 62651282 62653212 + 2410006H16Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0031085.1 MGP_129S1SvImJ_G0018793.1 mouse_genomes_project 11 80075384 80217737 - MGP_129S1SvImJ_P0031085 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0031086.1 MGP_129S1SvImJ_G0018793.1 mouse_genomes_project 11 80075384 80217737 - MGP_129S1SvImJ_P0031086 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0031087.1 MGP_129S1SvImJ_G0018793.1 mouse_genomes_project 11 80075393 80217895 - MGP_129S1SvImJ_P0031087 protein_coding protein_coding MGP_129S1SvImJ_T0031088.1 MGP_129S1SvImJ_G0018793.1 mouse_genomes_project 11 80089660 80217895 - MGP_129S1SvImJ_P0031088 protein_coding protein_coding MGP_129S1SvImJ_T0031089.1 MGP_129S1SvImJ_G0018793.1 mouse_genomes_project 11 80110925 80125886 - MGP_129S1SvImJ_P0031089 protein_coding protein_coding MGP_129S1SvImJ_T0031090.1 MGP_129S1SvImJ_G0018793.1 mouse_genomes_project 11 80111188 80123638 - MGP_129S1SvImJ_P0031090 protein_coding protein_coding MGP_129S1SvImJ_T0031041.1 MGP_129S1SvImJ_G0018779.1 mouse_genomes_project 11 79405207 79430319 - MGP_129S1SvImJ_P0031041 Slc13a2 protein_coding protein_coding MGP_129S1SvImJ_T0028039.1 MGP_129S1SvImJ_G0018035.1 mouse_genomes_project 11 5644140 5888236 - MGP_129S1SvImJ_P0028039 Tns3 protein_coding protein_coding MGP_129S1SvImJ_T0028040.1 MGP_129S1SvImJ_G0018035.1 mouse_genomes_project 11 5663449 5684228 - Tns3 protein_coding processed_transcript MGP_129S1SvImJ_T0028041.1 MGP_129S1SvImJ_G0018035.1 mouse_genomes_project 11 5754997 5762813 - Tns3 protein_coding processed_transcript MGP_129S1SvImJ_T0028042.1 MGP_129S1SvImJ_G0018035.1 mouse_genomes_project 11 5763153 5796576 - Tns3 protein_coding processed_transcript MGP_129S1SvImJ_T0033235.1 MGP_129S1SvImJ_G0019337.1 mouse_genomes_project 11 113224044 113228601 + Prkar1a protein_coding processed_transcript MGP_129S1SvImJ_T0033236.1 MGP_129S1SvImJ_G0019337.1 mouse_genomes_project 11 113224044 113244304 + MGP_129S1SvImJ_P0033236 Prkar1a protein_coding protein_coding MGP_129S1SvImJ_T0033237.1 MGP_129S1SvImJ_G0019337.1 mouse_genomes_project 11 113225214 113236399 + MGP_129S1SvImJ_P0033237 Prkar1a protein_coding protein_coding MGP_129S1SvImJ_T0033238.1 MGP_129S1SvImJ_G0019337.1 mouse_genomes_project 11 113225560 113244304 + MGP_129S1SvImJ_P0033238 Prkar1a protein_coding protein_coding MGP_129S1SvImJ_T0033239.1 MGP_129S1SvImJ_G0019337.1 mouse_genomes_project 11 113240591 113241624 + Prkar1a protein_coding processed_transcript MGP_129S1SvImJ_T0032910.1 MGP_129S1SvImJ_G0019263.1 mouse_genomes_project 11 106431134 106486492 - MGP_129S1SvImJ_P0032910 Plekhm1 protein_coding protein_coding MGP_129S1SvImJ_T0032911.1 MGP_129S1SvImJ_G0019263.1 mouse_genomes_project 11 106433474 106461572 - MGP_129S1SvImJ_P0032911 Plekhm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032312.1 MGP_129S1SvImJ_G0019140.1 mouse_genomes_project 11 102849124 102852744 - MGP_129S1SvImJ_P0032312 Krt36 protein_coding protein_coding MGP_129S1SvImJ_T0028802.1 MGP_129S1SvImJ_G0018234.1 mouse_genomes_project 11 48736561 48764038 + Flt4 protein_coding processed_transcript MGP_129S1SvImJ_T0028803.1 MGP_129S1SvImJ_G0018234.1 mouse_genomes_project 11 48747250 48788357 + MGP_129S1SvImJ_P0028803 Flt4 protein_coding protein_coding MGP_129S1SvImJ_T0012775.1 MGP_129S1SvImJ_G0010864.1 mouse_genomes_project 11 110719216 110719567 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029201.1 MGP_129S1SvImJ_G0018333.1 mouse_genomes_project 11 55052593 55151333 - MGP_129S1SvImJ_P0029201 Glra1 protein_coding protein_coding MGP_129S1SvImJ_T0029202.1 MGP_129S1SvImJ_G0018333.1 mouse_genomes_project 11 55052593 55151245 - MGP_129S1SvImJ_P0029202 Glra1 protein_coding protein_coding MGP_129S1SvImJ_T0029203.1 MGP_129S1SvImJ_G0018333.1 mouse_genomes_project 11 55052593 55151710 - MGP_129S1SvImJ_P0029203 Glra1 protein_coding protein_coding MGP_129S1SvImJ_T0003183.1 MGP_129S1SvImJ_G0002957.1 mouse_genomes_project 11 53136194 53136860 - Gm12214 antisense antisense MGP_129S1SvImJ_T0031400.1 MGP_129S1SvImJ_G0018879.1 mouse_genomes_project 11 86657901 86669944 + MGP_129S1SvImJ_P0031400 1700125H20Rik protein_coding protein_coding MGP_129S1SvImJ_T0031401.1 MGP_129S1SvImJ_G0018879.1 mouse_genomes_project 11 86658593 86669944 + MGP_129S1SvImJ_P0031401 1700125H20Rik protein_coding protein_coding MGP_129S1SvImJ_T0033656.1 MGP_129S1SvImJ_G0019422.1 mouse_genomes_project 11 120384187 120387187 + MGP_129S1SvImJ_P0033656 Galr2 protein_coding protein_coding MGP_129S1SvImJ_T0033657.1 MGP_129S1SvImJ_G0019422.1 mouse_genomes_project 11 120384734 120386910 + Galr2 protein_coding processed_transcript MGP_129S1SvImJ_T0029288.1 MGP_129S1SvImJ_G0018369.1 mouse_genomes_project 11 58461916 58462944 + MGP_129S1SvImJ_P0029288 protein_coding protein_coding MGP_129S1SvImJ_T0030007.1 MGP_129S1SvImJ_G0018542.1 mouse_genomes_project 11 70087744 70110240 + MGP_129S1SvImJ_P0030007 Fxr2 protein_coding protein_coding MGP_129S1SvImJ_T0030008.1 MGP_129S1SvImJ_G0018542.1 mouse_genomes_project 11 70094895 70096154 + Fxr2 protein_coding processed_transcript MGP_129S1SvImJ_T0030009.1 MGP_129S1SvImJ_G0018542.1 mouse_genomes_project 11 70100664 70106744 + Fxr2 protein_coding processed_transcript MGP_129S1SvImJ_T0030010.1 MGP_129S1SvImJ_G0018542.1 mouse_genomes_project 11 70106547 70108024 + Fxr2 protein_coding processed_transcript MGP_129S1SvImJ_T0030011.1 MGP_129S1SvImJ_G0018542.1 mouse_genomes_project 11 70108071 70108665 + Fxr2 protein_coding processed_transcript MGP_129S1SvImJ_T0030012.1 MGP_129S1SvImJ_G0018542.1 mouse_genomes_project 11 70109262 70109866 + Fxr2 protein_coding processed_transcript MGP_129S1SvImJ_T0006380.1 MGP_129S1SvImJ_G0005318.1 mouse_genomes_project 11 119658350 119670707 + Gm26613 lincRNA lincRNA MGP_129S1SvImJ_T0012678.1 MGP_129S1SvImJ_G0010767.1 mouse_genomes_project 11 71647822 71648460 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012743.1 MGP_129S1SvImJ_G0010832.1 mouse_genomes_project 11 99500972 99501092 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029156.1 MGP_129S1SvImJ_G0018320.1 mouse_genomes_project 11 54354057 54358179 + MGP_129S1SvImJ_P0029156 Hint1 protein_coding protein_coding MGP_129S1SvImJ_T0029157.1 MGP_129S1SvImJ_G0018320.1 mouse_genomes_project 11 54354155 54357985 + MGP_129S1SvImJ_P0029157 Hint1 protein_coding protein_coding MGP_129S1SvImJ_T0030489.1 MGP_129S1SvImJ_G0018640.1 mouse_genomes_project 11 73064941 73075347 + Mybbp1a protein_coding retained_intron MGP_129S1SvImJ_T0030490.1 MGP_129S1SvImJ_G0018640.1 mouse_genomes_project 11 73064941 73075347 + MGP_129S1SvImJ_P0030490 Mybbp1a protein_coding protein_coding MGP_129S1SvImJ_T0030491.1 MGP_129S1SvImJ_G0018640.1 mouse_genomes_project 11 73064943 73074808 + Mybbp1a protein_coding retained_intron MGP_129S1SvImJ_T0030492.1 MGP_129S1SvImJ_G0018640.1 mouse_genomes_project 11 73064963 73067160 + Mybbp1a protein_coding retained_intron MGP_129S1SvImJ_T0030493.1 MGP_129S1SvImJ_G0018640.1 mouse_genomes_project 11 73067358 73068142 + Mybbp1a protein_coding retained_intron MGP_129S1SvImJ_T0030494.1 MGP_129S1SvImJ_G0018640.1 mouse_genomes_project 11 73071795 73074584 + Mybbp1a protein_coding retained_intron MGP_129S1SvImJ_T0030495.1 MGP_129S1SvImJ_G0018640.1 mouse_genomes_project 11 73073216 73074285 + Mybbp1a protein_coding retained_intron MGP_129S1SvImJ_T0030496.1 MGP_129S1SvImJ_G0018640.1 mouse_genomes_project 11 73074152 73074681 + Mybbp1a protein_coding retained_intron MGP_129S1SvImJ_T0009664.1 MGP_129S1SvImJ_G0007780.1 mouse_genomes_project 11 3594860 3594913 - Gm22123 miRNA miRNA MGP_129S1SvImJ_T0032633.1 MGP_129S1SvImJ_G0019214.1 mouse_genomes_project 11 104902789 104908480 - MGP_129S1SvImJ_P0032633 Sost protein_coding protein_coding MGP_129S1SvImJ_T0031920.1 MGP_129S1SvImJ_G0019011.1 mouse_genomes_project 11 99114832 99124805 - MGP_129S1SvImJ_P0031920 Snx11 protein_coding protein_coding MGP_129S1SvImJ_T0031921.1 MGP_129S1SvImJ_G0019011.1 mouse_genomes_project 11 99115154 99124833 - MGP_129S1SvImJ_P0031921 Snx11 protein_coding protein_coding MGP_129S1SvImJ_T0031922.1 MGP_129S1SvImJ_G0019011.1 mouse_genomes_project 11 99117168 99124766 - MGP_129S1SvImJ_P0031922 Snx11 protein_coding protein_coding MGP_129S1SvImJ_T0031923.1 MGP_129S1SvImJ_G0019011.1 mouse_genomes_project 11 99117375 99118328 - Snx11 protein_coding processed_transcript MGP_129S1SvImJ_T0031924.1 MGP_129S1SvImJ_G0019011.1 mouse_genomes_project 11 99119814 99121915 - Snx11 protein_coding processed_transcript MGP_129S1SvImJ_T0031925.1 MGP_129S1SvImJ_G0019011.1 mouse_genomes_project 11 99123573 99124794 - Snx11 protein_coding processed_transcript MGP_129S1SvImJ_T0028950.1 MGP_129S1SvImJ_G0018271.1 mouse_genomes_project 11 50873708 50887996 - MGP_129S1SvImJ_P0028950 Rmnd5b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028951.1 MGP_129S1SvImJ_G0018271.1 mouse_genomes_project 11 50873710 50888245 - MGP_129S1SvImJ_P0028951 Rmnd5b protein_coding protein_coding MGP_129S1SvImJ_T0028952.1 MGP_129S1SvImJ_G0018271.1 mouse_genomes_project 11 50874076 50875872 - MGP_129S1SvImJ_P0028952 Rmnd5b protein_coding protein_coding MGP_129S1SvImJ_T0028953.1 MGP_129S1SvImJ_G0018271.1 mouse_genomes_project 11 50874120 50888240 - MGP_129S1SvImJ_P0028953 Rmnd5b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0028954.1 MGP_129S1SvImJ_G0018271.1 mouse_genomes_project 11 50881700 50888102 - Rmnd5b protein_coding processed_transcript MGP_129S1SvImJ_T0030540.1 MGP_129S1SvImJ_G0018650.1 mouse_genomes_project 11 73716726 73760137 + MGP_129S1SvImJ_P0030540 Ncbp3 protein_coding protein_coding MGP_129S1SvImJ_T0030541.1 MGP_129S1SvImJ_G0018650.1 mouse_genomes_project 11 73716813 73727912 + Ncbp3 protein_coding retained_intron MGP_129S1SvImJ_T0030542.1 MGP_129S1SvImJ_G0018650.1 mouse_genomes_project 11 73716816 73725466 + Ncbp3 protein_coding retained_intron MGP_129S1SvImJ_T0003283.1 MGP_129S1SvImJ_G0003036.1 mouse_genomes_project 11 97218627 97224152 + Gm11513 antisense antisense MGP_129S1SvImJ_T0003325.1 MGP_129S1SvImJ_G0003070.1 mouse_genomes_project 11 105342066 105343538 - Bloodlinc antisense antisense MGP_129S1SvImJ_T0028755.1 MGP_129S1SvImJ_G0018217.1 mouse_genomes_project 11 48167924 48168905 - MGP_129S1SvImJ_P0028755 Olfr1396 protein_coding protein_coding MGP_129S1SvImJ_T0027800.1 MGP_129S1SvImJ_G0017980.1 mouse_genomes_project 11 1168749 1171994 + Osm protein_coding processed_transcript MGP_129S1SvImJ_T0027801.1 MGP_129S1SvImJ_G0017980.1 mouse_genomes_project 11 1168749 1173356 + MGP_129S1SvImJ_P0027801 Osm protein_coding protein_coding MGP_129S1SvImJ_T0033847.1 MGP_129S1SvImJ_G0019459.1 mouse_genomes_project 11 122266034 122269142 - MGP_129S1SvImJ_P0033847 Socs3 protein_coding protein_coding MGP_129S1SvImJ_T0033848.1 MGP_129S1SvImJ_G0019459.1 mouse_genomes_project 11 122268830 122270003 - Socs3 protein_coding processed_transcript MGP_129S1SvImJ_T0033849.1 MGP_129S1SvImJ_G0019459.1 mouse_genomes_project 11 122268889 122269407 - Socs3 protein_coding processed_transcript MGP_129S1SvImJ_T0099231.1 MGP_129S1SvImJ_G0037298.1 mouse_genomes_project 11 24196998 24197162 - Gm22868 snRNA snRNA MGP_129S1SvImJ_T0030447.1 MGP_129S1SvImJ_G0018627.1 mouse_genomes_project 11 72627032 72636543 - MGP_129S1SvImJ_P0030447 Aipl1 protein_coding protein_coding MGP_129S1SvImJ_T0030448.1 MGP_129S1SvImJ_G0018627.1 mouse_genomes_project 11 72627789 72636563 - MGP_129S1SvImJ_P0030448 Aipl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028646.1 MGP_129S1SvImJ_G0018181.1 mouse_genomes_project 11 43287579 43311406 - MGP_129S1SvImJ_P0028646 Ublcp1 protein_coding protein_coding MGP_129S1SvImJ_T0028647.1 MGP_129S1SvImJ_G0018181.1 mouse_genomes_project 11 43294565 43298240 - Ublcp1 protein_coding processed_transcript MGP_129S1SvImJ_T0028648.1 MGP_129S1SvImJ_G0018181.1 mouse_genomes_project 11 43294565 43300827 - Ublcp1 protein_coding processed_transcript MGP_129S1SvImJ_T0028649.1 MGP_129S1SvImJ_G0018181.1 mouse_genomes_project 11 43295544 43305006 - Ublcp1 protein_coding processed_transcript MGP_129S1SvImJ_T0028650.1 MGP_129S1SvImJ_G0018181.1 mouse_genomes_project 11 43296253 43301350 - Ublcp1 protein_coding processed_transcript MGP_129S1SvImJ_T0028651.1 MGP_129S1SvImJ_G0018181.1 mouse_genomes_project 11 43306531 43307985 - Ublcp1 protein_coding processed_transcript MGP_129S1SvImJ_T0030509.1 MGP_129S1SvImJ_G0018644.1 mouse_genomes_project 11 73341640 73376761 + Ankfy1 protein_coding retained_intron MGP_129S1SvImJ_T0030510.1 MGP_129S1SvImJ_G0018644.1 mouse_genomes_project 11 73341640 73423075 + MGP_129S1SvImJ_P0030510 Ankfy1 protein_coding protein_coding MGP_129S1SvImJ_T0030511.1 MGP_129S1SvImJ_G0018644.1 mouse_genomes_project 11 73341640 73422121 + MGP_129S1SvImJ_P0030511 Ankfy1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030512.1 MGP_129S1SvImJ_G0018644.1 mouse_genomes_project 11 73363682 73418488 + Ankfy1 protein_coding processed_transcript MGP_129S1SvImJ_T0030513.1 MGP_129S1SvImJ_G0018644.1 mouse_genomes_project 11 73411279 73412255 + Ankfy1 protein_coding retained_intron MGP_129S1SvImJ_T0030514.1 MGP_129S1SvImJ_G0018644.1 mouse_genomes_project 11 73416044 73418653 + Ankfy1 protein_coding retained_intron MGP_129S1SvImJ_T0032614.1 MGP_129S1SvImJ_G0019210.1 mouse_genomes_project 11 104575034 104577328 + MGP_129S1SvImJ_P0032614 Arl4d protein_coding protein_coding MGP_129S1SvImJ_T0006264.1 MGP_129S1SvImJ_G0005235.1 mouse_genomes_project 11 60805397 60813420 + Gm26534 lincRNA lincRNA MGP_129S1SvImJ_T0100498.1 MGP_129S1SvImJ_G0038565.1 mouse_genomes_project 11 47831173 47831241 + Snord95 snoRNA snoRNA MGP_129S1SvImJ_T0027748.1 MGP_129S1SvImJ_G0017968.1 mouse_genomes_project 11 850754 888690 - MGP_129S1SvImJ_P0027748 4930556J24Rik protein_coding protein_coding MGP_129S1SvImJ_T0029345.1 MGP_129S1SvImJ_G0018394.1 mouse_genomes_project 11 59069739 59114747 - MGP_129S1SvImJ_P0029345 Wnt3a protein_coding protein_coding MGP_129S1SvImJ_T0029800.1 MGP_129S1SvImJ_G0018495.1 mouse_genomes_project 11 68117415 68120036 + Dhrs7c protein_coding processed_transcript MGP_129S1SvImJ_T0029801.1 MGP_129S1SvImJ_G0018495.1 mouse_genomes_project 11 68117499 68120404 + Dhrs7c protein_coding processed_transcript MGP_129S1SvImJ_T0029802.1 MGP_129S1SvImJ_G0018495.1 mouse_genomes_project 11 68117504 68120565 + Dhrs7c protein_coding processed_transcript MGP_129S1SvImJ_T0029803.1 MGP_129S1SvImJ_G0018495.1 mouse_genomes_project 11 68117505 68118295 + Dhrs7c protein_coding processed_transcript MGP_129S1SvImJ_T0029804.1 MGP_129S1SvImJ_G0018495.1 mouse_genomes_project 11 68117515 68135238 + MGP_129S1SvImJ_P0029804 Dhrs7c protein_coding protein_coding MGP_129S1SvImJ_T0028187.1 MGP_129S1SvImJ_G0018070.1 mouse_genomes_project 11 18675160 18732690 + Peli1 protein_coding retained_intron MGP_129S1SvImJ_T0028188.1 MGP_129S1SvImJ_G0018070.1 mouse_genomes_project 11 18675160 18739471 + MGP_129S1SvImJ_P0028188 Peli1 protein_coding protein_coding MGP_129S1SvImJ_T0028189.1 MGP_129S1SvImJ_G0018070.1 mouse_genomes_project 11 18675987 18738550 + Peli1 protein_coding retained_intron MGP_129S1SvImJ_T0028190.1 MGP_129S1SvImJ_G0018070.1 mouse_genomes_project 11 18724328 18739471 + MGP_129S1SvImJ_P0028190 Peli1 protein_coding protein_coding MGP_129S1SvImJ_T0003156.1 MGP_129S1SvImJ_G0002931.1 mouse_genomes_project 11 27519813 27524783 + antisense antisense MGP_129S1SvImJ_T0009754.1 MGP_129S1SvImJ_G0007870.1 mouse_genomes_project 11 100209615 100209754 + Mir8102 miRNA miRNA MGP_129S1SvImJ_T0029749.1 MGP_129S1SvImJ_G0018480.1 mouse_genomes_project 11 66444255 66774673 - MGP_129S1SvImJ_P0029749 Shisa6 protein_coding protein_coding MGP_129S1SvImJ_T0029750.1 MGP_129S1SvImJ_G0018480.1 mouse_genomes_project 11 66444255 66774673 - MGP_129S1SvImJ_P0029750 Shisa6 protein_coding protein_coding MGP_129S1SvImJ_T0029751.1 MGP_129S1SvImJ_G0018480.1 mouse_genomes_project 11 66618074 66751460 - Shisa6 protein_coding processed_transcript MGP_129S1SvImJ_T0030580.1 MGP_129S1SvImJ_G0018665.1 mouse_genomes_project 11 74122861 74126302 - MGP_129S1SvImJ_P0030580 Olfr378 protein_coding protein_coding MGP_129S1SvImJ_T0028405.1 MGP_129S1SvImJ_G0018115.1 mouse_genomes_project 11 28585851 28751272 - MGP_129S1SvImJ_P0028405 Acyp2 protein_coding protein_coding MGP_129S1SvImJ_T0031115.1 MGP_129S1SvImJ_G0018801.1 mouse_genomes_project 11 80701998 80816865 + MGP_129S1SvImJ_P0031115 Rab11fip4 protein_coding protein_coding MGP_129S1SvImJ_T0031116.1 MGP_129S1SvImJ_G0018801.1 mouse_genomes_project 11 80777492 80800478 + MGP_129S1SvImJ_P0031116 Rab11fip4 protein_coding protein_coding MGP_129S1SvImJ_T0029743.1 MGP_129S1SvImJ_G0018479.1 mouse_genomes_project 11 66050254 66400507 - MGP_129S1SvImJ_P0029743 Dnah9 protein_coding protein_coding MGP_129S1SvImJ_T0029744.1 MGP_129S1SvImJ_G0018479.1 mouse_genomes_project 11 66050375 66232978 - MGP_129S1SvImJ_P0029744 Dnah9 protein_coding protein_coding MGP_129S1SvImJ_T0029745.1 MGP_129S1SvImJ_G0018479.1 mouse_genomes_project 11 66069764 66075570 - Dnah9 protein_coding retained_intron MGP_129S1SvImJ_T0029746.1 MGP_129S1SvImJ_G0018479.1 mouse_genomes_project 11 66129540 66150533 - MGP_129S1SvImJ_P0029746 Dnah9 protein_coding protein_coding MGP_129S1SvImJ_T0029747.1 MGP_129S1SvImJ_G0018479.1 mouse_genomes_project 11 66350001 66400418 - MGP_129S1SvImJ_P0029747 Dnah9 protein_coding protein_coding MGP_129S1SvImJ_T0029748.1 MGP_129S1SvImJ_G0018479.1 mouse_genomes_project 11 66390722 66400525 - Dnah9 protein_coding retained_intron MGP_129S1SvImJ_T0017225.1 MGP_129S1SvImJ_G0015175.1 mouse_genomes_project 11 59347101 59355084 + 4933439C10Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017226.1 MGP_129S1SvImJ_G0015175.1 mouse_genomes_project 11 59347124 59352509 + 4933439C10Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017227.1 MGP_129S1SvImJ_G0015175.1 mouse_genomes_project 11 59347533 59348289 + 4933439C10Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017228.1 MGP_129S1SvImJ_G0015175.1 mouse_genomes_project 11 59347589 59351540 + 4933439C10Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017229.1 MGP_129S1SvImJ_G0015175.1 mouse_genomes_project 11 59348104 59351592 + 4933439C10Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017230.1 MGP_129S1SvImJ_G0015175.1 mouse_genomes_project 11 59349077 59352509 + 4933439C10Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0029357.1 MGP_129S1SvImJ_G0018398.1 mouse_genomes_project 11 59286556 59295997 + MGP_129S1SvImJ_P0029357 Jmjd4 protein_coding protein_coding MGP_129S1SvImJ_T0029358.1 MGP_129S1SvImJ_G0018398.1 mouse_genomes_project 11 59286556 59296091 + MGP_129S1SvImJ_P0029358 Jmjd4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029359.1 MGP_129S1SvImJ_G0018398.1 mouse_genomes_project 11 59286556 59295997 + MGP_129S1SvImJ_P0029359 Jmjd4 protein_coding protein_coding MGP_129S1SvImJ_T0029360.1 MGP_129S1SvImJ_G0018398.1 mouse_genomes_project 11 59286632 59293630 + Jmjd4 protein_coding retained_intron MGP_129S1SvImJ_T0012526.1 MGP_129S1SvImJ_G0010615.1 mouse_genomes_project 11 18122633 18123256 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033350.1 MGP_129S1SvImJ_G0019362.1 mouse_genomes_project 11 118803306 118817809 + MGP_129S1SvImJ_P0033350 Gprc5c protein_coding protein_coding MGP_129S1SvImJ_T0033351.1 MGP_129S1SvImJ_G0019362.1 mouse_genomes_project 11 118803633 118824429 + MGP_129S1SvImJ_P0033351 Gprc5c protein_coding protein_coding MGP_129S1SvImJ_T0033352.1 MGP_129S1SvImJ_G0019362.1 mouse_genomes_project 11 118803694 118823171 + MGP_129S1SvImJ_P0033352 Gprc5c protein_coding protein_coding MGP_129S1SvImJ_T0033353.1 MGP_129S1SvImJ_G0019362.1 mouse_genomes_project 11 118804004 118823172 + MGP_129S1SvImJ_P0033353 Gprc5c protein_coding protein_coding MGP_129S1SvImJ_T0033354.1 MGP_129S1SvImJ_G0019362.1 mouse_genomes_project 11 118804034 118818423 + MGP_129S1SvImJ_P0033354 Gprc5c protein_coding protein_coding MGP_129S1SvImJ_T0033355.1 MGP_129S1SvImJ_G0019362.1 mouse_genomes_project 11 118804473 118817973 + MGP_129S1SvImJ_P0033355 Gprc5c protein_coding protein_coding MGP_129S1SvImJ_T0033356.1 MGP_129S1SvImJ_G0019362.1 mouse_genomes_project 11 118818567 118824683 + MGP_129S1SvImJ_P0033356 Gprc5c protein_coding protein_coding MGP_129S1SvImJ_T0028915.1 MGP_129S1SvImJ_G0018263.1 mouse_genomes_project 11 50252124 50253066 + MGP_129S1SvImJ_P0028915 Olfr54 protein_coding protein_coding MGP_129S1SvImJ_T0029466.1 MGP_129S1SvImJ_G0018421.1 mouse_genomes_project 11 60612498 60628664 + MGP_129S1SvImJ_P0029466 Llgl1 protein_coding protein_coding MGP_129S1SvImJ_T0029467.1 MGP_129S1SvImJ_G0018421.1 mouse_genomes_project 11 60612620 60628664 + MGP_129S1SvImJ_P0029467 Llgl1 protein_coding protein_coding MGP_129S1SvImJ_T0029468.1 MGP_129S1SvImJ_G0018421.1 mouse_genomes_project 11 60618699 60620572 + Llgl1 protein_coding retained_intron MGP_129S1SvImJ_T0030819.1 MGP_129S1SvImJ_G0018735.1 mouse_genomes_project 11 77247789 77347259 - MGP_129S1SvImJ_P0030819 Abr protein_coding protein_coding MGP_129S1SvImJ_T0030820.1 MGP_129S1SvImJ_G0018735.1 mouse_genomes_project 11 77247789 77406440 - MGP_129S1SvImJ_P0030820 Abr protein_coding protein_coding MGP_129S1SvImJ_T0030821.1 MGP_129S1SvImJ_G0018735.1 mouse_genomes_project 11 77247790 77346836 - MGP_129S1SvImJ_P0030821 Abr protein_coding protein_coding MGP_129S1SvImJ_T0030822.1 MGP_129S1SvImJ_G0018735.1 mouse_genomes_project 11 77247806 77302536 - MGP_129S1SvImJ_P0030822 Abr protein_coding protein_coding MGP_129S1SvImJ_T0030823.1 MGP_129S1SvImJ_G0018735.1 mouse_genomes_project 11 77250163 77331813 - MGP_129S1SvImJ_P0030823 Abr protein_coding protein_coding MGP_129S1SvImJ_T0030824.1 MGP_129S1SvImJ_G0018735.1 mouse_genomes_project 11 77254104 77268277 - Abr protein_coding processed_transcript MGP_129S1SvImJ_T0030825.1 MGP_129S1SvImJ_G0018735.1 mouse_genomes_project 11 77287637 77302376 - MGP_129S1SvImJ_P0030825 Abr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030826.1 MGP_129S1SvImJ_G0018735.1 mouse_genomes_project 11 77291580 77330048 - Abr protein_coding retained_intron MGP_129S1SvImJ_T0030827.1 MGP_129S1SvImJ_G0018735.1 mouse_genomes_project 11 77298364 77328984 - MGP_129S1SvImJ_P0030827 Abr protein_coding protein_coding MGP_129S1SvImJ_T0030828.1 MGP_129S1SvImJ_G0018735.1 mouse_genomes_project 11 77312684 77412656 - MGP_129S1SvImJ_P0030828 Abr protein_coding protein_coding MGP_129S1SvImJ_T0030829.1 MGP_129S1SvImJ_G0018735.1 mouse_genomes_project 11 77312738 77457669 - MGP_129S1SvImJ_P0030829 Abr protein_coding protein_coding MGP_129S1SvImJ_T0030830.1 MGP_129S1SvImJ_G0018735.1 mouse_genomes_project 11 77312794 77448764 - MGP_129S1SvImJ_P0030830 Abr protein_coding protein_coding MGP_129S1SvImJ_T0030831.1 MGP_129S1SvImJ_G0018735.1 mouse_genomes_project 11 77319427 77330027 - Abr protein_coding processed_transcript MGP_129S1SvImJ_T0012796.1 MGP_129S1SvImJ_G0010885.1 mouse_genomes_project 11 122212091 122212515 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098457.1 MGP_129S1SvImJ_G0036542.1 mouse_genomes_project 11 91999224 91999343 - n-R5s72 rRNA rRNA MGP_129S1SvImJ_T0030213.1 MGP_129S1SvImJ_G0018582.1 mouse_genomes_project 11 70641586 70646063 + Mgl2 protein_coding processed_transcript MGP_129S1SvImJ_T0030214.1 MGP_129S1SvImJ_G0018582.1 mouse_genomes_project 11 70641600 70649100 + MGP_129S1SvImJ_P0030214 Mgl2 protein_coding protein_coding MGP_129S1SvImJ_T0012754.1 MGP_129S1SvImJ_G0010843.1 mouse_genomes_project 11 104343645 104343941 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029036.1 MGP_129S1SvImJ_G0018293.1 mouse_genomes_project 11 52838932 52841221 - MGP_129S1SvImJ_P0029036 Gm10447 protein_coding protein_coding MGP_129S1SvImJ_T0012772.1 MGP_129S1SvImJ_G0010861.1 mouse_genomes_project 11 110358919 110359751 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100527.1 MGP_129S1SvImJ_G0038594.1 mouse_genomes_project 11 84687657 84687789 - Gm23951 snoRNA snoRNA MGP_129S1SvImJ_T0006365.1 MGP_129S1SvImJ_G0005308.1 mouse_genomes_project 11 115513204 115519517 - Gm11674 lincRNA lincRNA MGP_129S1SvImJ_T0030581.1 MGP_129S1SvImJ_G0018666.1 mouse_genomes_project 11 74183389 74184456 - MGP_129S1SvImJ_P0030581 protein_coding protein_coding MGP_129S1SvImJ_T0030582.1 MGP_129S1SvImJ_G0018666.1 mouse_genomes_project 11 74183389 74185230 - MGP_129S1SvImJ_P0030582 protein_coding protein_coding MGP_129S1SvImJ_T0028507.1 MGP_129S1SvImJ_G0018142.1 mouse_genomes_project 11 31492738 31495576 - MGP_129S1SvImJ_P0028507 Tlx3 protein_coding protein_coding MGP_129S1SvImJ_T0028692.1 MGP_129S1SvImJ_G0018194.1 mouse_genomes_project 11 45356368 45360300 + MGP_129S1SvImJ_P0028692 Med7 protein_coding protein_coding MGP_129S1SvImJ_T0028693.1 MGP_129S1SvImJ_G0018194.1 mouse_genomes_project 11 45356392 45360206 + MGP_129S1SvImJ_P0028693 Med7 protein_coding protein_coding MGP_129S1SvImJ_T0028694.1 MGP_129S1SvImJ_G0018194.1 mouse_genomes_project 11 45356395 45360969 + MGP_129S1SvImJ_P0028694 Med7 protein_coding protein_coding MGP_129S1SvImJ_T0028695.1 MGP_129S1SvImJ_G0018194.1 mouse_genomes_project 11 45356404 45362163 + MGP_129S1SvImJ_P0028695 Med7 protein_coding protein_coding MGP_129S1SvImJ_T0028696.1 MGP_129S1SvImJ_G0018194.1 mouse_genomes_project 11 45356414 45360542 + MGP_129S1SvImJ_P0028696 Med7 protein_coding protein_coding MGP_129S1SvImJ_T0028697.1 MGP_129S1SvImJ_G0018194.1 mouse_genomes_project 11 45356417 45362163 + MGP_129S1SvImJ_P0028697 Med7 protein_coding protein_coding MGP_129S1SvImJ_T0028698.1 MGP_129S1SvImJ_G0018194.1 mouse_genomes_project 11 45356421 45360492 + MGP_129S1SvImJ_P0028698 Med7 protein_coding protein_coding MGP_129S1SvImJ_T0028699.1 MGP_129S1SvImJ_G0018194.1 mouse_genomes_project 11 45356448 45359386 + Med7 protein_coding processed_transcript MGP_129S1SvImJ_T0028700.1 MGP_129S1SvImJ_G0018194.1 mouse_genomes_project 11 45359095 45360420 + MGP_129S1SvImJ_P0028700 Med7 protein_coding protein_coding MGP_129S1SvImJ_T0009784.1 MGP_129S1SvImJ_G0007900.1 mouse_genomes_project 11 124446760 124446858 - Mir338 miRNA miRNA MGP_129S1SvImJ_T0003326.1 MGP_129S1SvImJ_G0003071.1 mouse_genomes_project 11 106248289 106250474 - Gm20511 antisense antisense MGP_129S1SvImJ_T0017242.1 MGP_129S1SvImJ_G0015183.1 mouse_genomes_project 11 72884565 72886726 + 1700051A21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017243.1 MGP_129S1SvImJ_G0015183.1 mouse_genomes_project 11 72884977 72886708 + 1700051A21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0012555.1 MGP_129S1SvImJ_G0010644.1 mouse_genomes_project 11 27327713 27328653 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003276.1 MGP_129S1SvImJ_G0003032.1 mouse_genomes_project 11 90074309 90082003 + Gm15893 antisense antisense MGP_129S1SvImJ_T0011317.1 MGP_129S1SvImJ_G0009433.1 mouse_genomes_project 11 41635634 41635946 + Gm25543 misc_RNA misc_RNA MGP_129S1SvImJ_T0029220.1 MGP_129S1SvImJ_G0018340.1 mouse_genomes_project 11 57467834 57471943 - MGP_129S1SvImJ_P0029220 Hand1 protein_coding protein_coding MGP_129S1SvImJ_T0029221.1 MGP_129S1SvImJ_G0018340.1 mouse_genomes_project 11 57467836 57471282 - MGP_129S1SvImJ_P0029221 Hand1 protein_coding protein_coding MGP_129S1SvImJ_T0029222.1 MGP_129S1SvImJ_G0018340.1 mouse_genomes_project 11 57470828 57471943 - MGP_129S1SvImJ_P0029222 Hand1 protein_coding protein_coding MGP_129S1SvImJ_T0100532.1 MGP_129S1SvImJ_G0038599.1 mouse_genomes_project 11 100256505 100256642 - Snora21 snoRNA snoRNA MGP_129S1SvImJ_T0028352.1 MGP_129S1SvImJ_G0018106.1 mouse_genomes_project 11 27367847 27515536 + MGP_129S1SvImJ_P0028352 Ccdc88a protein_coding protein_coding MGP_129S1SvImJ_T0028353.1 MGP_129S1SvImJ_G0018106.1 mouse_genomes_project 11 27367966 27424334 + MGP_129S1SvImJ_P0028353 Ccdc88a protein_coding protein_coding MGP_129S1SvImJ_T0028354.1 MGP_129S1SvImJ_G0018106.1 mouse_genomes_project 11 27460452 27465185 + Ccdc88a protein_coding processed_transcript MGP_129S1SvImJ_T0028355.1 MGP_129S1SvImJ_G0018106.1 mouse_genomes_project 11 27467844 27486263 + MGP_129S1SvImJ_P0028355 Ccdc88a protein_coding protein_coding MGP_129S1SvImJ_T0028356.1 MGP_129S1SvImJ_G0018106.1 mouse_genomes_project 11 27474310 27508834 + MGP_129S1SvImJ_P0028356 Ccdc88a protein_coding protein_coding MGP_129S1SvImJ_T0028357.1 MGP_129S1SvImJ_G0018106.1 mouse_genomes_project 11 27489490 27508246 + MGP_129S1SvImJ_P0028357 Ccdc88a protein_coding protein_coding MGP_129S1SvImJ_T0028358.1 MGP_129S1SvImJ_G0018106.1 mouse_genomes_project 11 27498657 27502588 + Ccdc88a protein_coding processed_transcript MGP_129S1SvImJ_T0033919.1 MGP_129S1SvImJ_G0019476.1 mouse_genomes_project 11 123591912 123595042 + Ccdc40 protein_coding processed_transcript MGP_129S1SvImJ_T0033920.1 MGP_129S1SvImJ_G0019476.1 mouse_genomes_project 11 123591918 123594958 + Ccdc40 protein_coding processed_transcript MGP_129S1SvImJ_T0033921.1 MGP_129S1SvImJ_G0019476.1 mouse_genomes_project 11 123592447 123633066 + MGP_129S1SvImJ_P0033921 Ccdc40 protein_coding protein_coding MGP_129S1SvImJ_T0033922.1 MGP_129S1SvImJ_G0019476.1 mouse_genomes_project 11 123622108 123632988 + Ccdc40 protein_coding retained_intron MGP_129S1SvImJ_T0033923.1 MGP_129S1SvImJ_G0019476.1 mouse_genomes_project 11 123627480 123633788 + Ccdc40 protein_coding processed_transcript MGP_129S1SvImJ_T0033924.1 MGP_129S1SvImJ_G0019476.1 mouse_genomes_project 11 123628319 123631674 + Ccdc40 protein_coding retained_intron MGP_129S1SvImJ_T0033925.1 MGP_129S1SvImJ_G0019476.1 mouse_genomes_project 11 123631425 123632858 + Ccdc40 protein_coding retained_intron MGP_129S1SvImJ_T0028791.1 MGP_129S1SvImJ_G0018224.1 mouse_genomes_project 11 48365396 48365983 + MGP_129S1SvImJ_P0028791 protein_coding protein_coding MGP_129S1SvImJ_T0032852.1 MGP_129S1SvImJ_G0019253.1 mouse_genomes_project 11 106069411 106087515 + Nmt1 protein_coding processed_transcript MGP_129S1SvImJ_T0032853.1 MGP_129S1SvImJ_G0019253.1 mouse_genomes_project 11 106069567 106114247 + MGP_129S1SvImJ_P0032853 Nmt1 protein_coding protein_coding MGP_129S1SvImJ_T0032854.1 MGP_129S1SvImJ_G0019253.1 mouse_genomes_project 11 106069806 106102819 + Nmt1 protein_coding processed_transcript MGP_129S1SvImJ_T0033566.1 MGP_129S1SvImJ_G0019405.1 mouse_genomes_project 11 119976274 119982586 + MGP_129S1SvImJ_P0033566 Smim5 protein_coding protein_coding MGP_129S1SvImJ_T0033567.1 MGP_129S1SvImJ_G0019405.1 mouse_genomes_project 11 119976487 119982214 + MGP_129S1SvImJ_P0033567 Smim5 protein_coding protein_coding MGP_129S1SvImJ_T0033568.1 MGP_129S1SvImJ_G0019405.1 mouse_genomes_project 11 119976511 119982027 + MGP_129S1SvImJ_P0033568 Smim5 protein_coding protein_coding MGP_129S1SvImJ_T0098458.1 MGP_129S1SvImJ_G0036543.1 mouse_genomes_project 11 100801757 100801864 - n-R5s73 rRNA rRNA MGP_129S1SvImJ_T0030219.1 MGP_129S1SvImJ_G0018584.1 mouse_genomes_project 11 70733290 70736952 + MGP_129S1SvImJ_P0030219 Slc16a11 protein_coding protein_coding MGP_129S1SvImJ_T0030220.1 MGP_129S1SvImJ_G0018584.1 mouse_genomes_project 11 70734448 70736951 + MGP_129S1SvImJ_P0030220 Slc16a11 protein_coding protein_coding MGP_129S1SvImJ_T0030221.1 MGP_129S1SvImJ_G0018584.1 mouse_genomes_project 11 70734537 70735393 + Slc16a11 protein_coding retained_intron MGP_129S1SvImJ_T0030222.1 MGP_129S1SvImJ_G0018584.1 mouse_genomes_project 11 70734618 70736952 + MGP_129S1SvImJ_P0030222 Slc16a11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030223.1 MGP_129S1SvImJ_G0018584.1 mouse_genomes_project 11 70734653 70736953 + MGP_129S1SvImJ_P0030223 Slc16a11 protein_coding protein_coding MGP_129S1SvImJ_T0030224.1 MGP_129S1SvImJ_G0018584.1 mouse_genomes_project 11 70734657 70736956 + MGP_129S1SvImJ_P0030224 Slc16a11 protein_coding protein_coding MGP_129S1SvImJ_T0030225.1 MGP_129S1SvImJ_G0018584.1 mouse_genomes_project 11 70734657 70736071 + MGP_129S1SvImJ_P0030225 Slc16a11 protein_coding protein_coding MGP_129S1SvImJ_T0030226.1 MGP_129S1SvImJ_G0018584.1 mouse_genomes_project 11 70734659 70735526 + MGP_129S1SvImJ_P0030226 Slc16a11 protein_coding protein_coding MGP_129S1SvImJ_T0030227.1 MGP_129S1SvImJ_G0018584.1 mouse_genomes_project 11 70734660 70736214 + Slc16a11 protein_coding processed_transcript MGP_129S1SvImJ_T0030228.1 MGP_129S1SvImJ_G0018584.1 mouse_genomes_project 11 70735100 70736019 + Slc16a11 protein_coding retained_intron MGP_129S1SvImJ_T0030229.1 MGP_129S1SvImJ_G0018584.1 mouse_genomes_project 11 70735356 70736952 + Slc16a11 protein_coding retained_intron MGP_129S1SvImJ_T0031525.1 MGP_129S1SvImJ_G0018908.1 mouse_genomes_project 11 89244857 89291030 + MGP_129S1SvImJ_P0031525 Hsf5 protein_coding protein_coding MGP_129S1SvImJ_T0028072.1 MGP_129S1SvImJ_G0018044.1 mouse_genomes_project 11 8738696 8765179 + protein_coding processed_transcript MGP_129S1SvImJ_T0028073.1 MGP_129S1SvImJ_G0018044.1 mouse_genomes_project 11 8740845 8793942 + MGP_129S1SvImJ_P0028073 protein_coding protein_coding MGP_129S1SvImJ_T0028074.1 MGP_129S1SvImJ_G0018044.1 mouse_genomes_project 11 8765907 8793940 + MGP_129S1SvImJ_P0028074 protein_coding protein_coding MGP_129S1SvImJ_T0006263.1 MGP_129S1SvImJ_G0005234.1 mouse_genomes_project 11 59977047 59980059 - 4930412M03Rik lincRNA lincRNA MGP_129S1SvImJ_T0017177.1 MGP_129S1SvImJ_G0015149.1 mouse_genomes_project 11 408451 409121 + Gm11947 processed_transcript processed_transcript MGP_129S1SvImJ_T0031590.1 MGP_129S1SvImJ_G0018923.1 mouse_genomes_project 11 90001319 90002521 + MGP_129S1SvImJ_P0031590 Ccdc182 protein_coding protein_coding MGP_129S1SvImJ_T0003377.1 MGP_129S1SvImJ_G0003112.1 mouse_genomes_project 11 124239959 124253558 - Rptoros antisense antisense MGP_129S1SvImJ_T0003269.1 MGP_129S1SvImJ_G0003027.1 mouse_genomes_project 11 87295415 87304296 - Bcas3os2 antisense antisense MGP_129S1SvImJ_T0006324.1 MGP_129S1SvImJ_G0005278.1 mouse_genomes_project 11 89957499 89961147 + Gm44783 lincRNA lincRNA MGP_129S1SvImJ_T0032205.1 MGP_129S1SvImJ_G0019075.1 mouse_genomes_project 11 101446712 101469175 + MGP_129S1SvImJ_P0032205 protein_coding protein_coding MGP_129S1SvImJ_T0032206.1 MGP_129S1SvImJ_G0019075.1 mouse_genomes_project 11 101455016 101457292 + protein_coding retained_intron MGP_129S1SvImJ_T0032207.1 MGP_129S1SvImJ_G0019075.1 mouse_genomes_project 11 101465833 101468477 + protein_coding retained_intron MGP_129S1SvImJ_T0099293.1 MGP_129S1SvImJ_G0037360.1 mouse_genomes_project 11 112578591 112578698 - Gm24149 snRNA snRNA MGP_129S1SvImJ_T0012525.1 MGP_129S1SvImJ_G0010614.1 mouse_genomes_project 11 17975334 17975733 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017202.1 MGP_129S1SvImJ_G0015160.1 mouse_genomes_project 11 21256771 21258387 + 1700030C12Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017203.1 MGP_129S1SvImJ_G0015160.1 mouse_genomes_project 11 21256775 21259402 + 1700030C12Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017204.1 MGP_129S1SvImJ_G0015160.1 mouse_genomes_project 11 21256801 21258933 + 1700030C12Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017205.1 MGP_129S1SvImJ_G0015160.1 mouse_genomes_project 11 21258591 21259385 + 1700030C12Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0033540.1 MGP_129S1SvImJ_G0019402.1 mouse_genomes_project 11 119894366 119930375 + MGP_129S1SvImJ_P0033540 Llgl2 protein_coding protein_coding MGP_129S1SvImJ_T0033541.1 MGP_129S1SvImJ_G0019402.1 mouse_genomes_project 11 119894375 119930373 + MGP_129S1SvImJ_P0033541 Llgl2 protein_coding protein_coding MGP_129S1SvImJ_T0033542.1 MGP_129S1SvImJ_G0019402.1 mouse_genomes_project 11 119894375 119917642 + MGP_129S1SvImJ_P0033542 Llgl2 protein_coding protein_coding MGP_129S1SvImJ_T0033543.1 MGP_129S1SvImJ_G0019402.1 mouse_genomes_project 11 119904134 119917084 + MGP_129S1SvImJ_P0033543 Llgl2 protein_coding protein_coding MGP_129S1SvImJ_T0033544.1 MGP_129S1SvImJ_G0019402.1 mouse_genomes_project 11 119906091 119917589 + MGP_129S1SvImJ_P0033544 Llgl2 protein_coding protein_coding MGP_129S1SvImJ_T0033545.1 MGP_129S1SvImJ_G0019402.1 mouse_genomes_project 11 119906480 119917649 + MGP_129S1SvImJ_P0033545 Llgl2 protein_coding protein_coding MGP_129S1SvImJ_T0033546.1 MGP_129S1SvImJ_G0019402.1 mouse_genomes_project 11 119906489 119917677 + MGP_129S1SvImJ_P0033546 Llgl2 protein_coding protein_coding MGP_129S1SvImJ_T0033547.1 MGP_129S1SvImJ_G0019402.1 mouse_genomes_project 11 119927846 119928914 + Llgl2 protein_coding retained_intron MGP_129S1SvImJ_T0033548.1 MGP_129S1SvImJ_G0019402.1 mouse_genomes_project 11 119928330 119929453 + Llgl2 protein_coding processed_transcript MGP_129S1SvImJ_T0033549.1 MGP_129S1SvImJ_G0019402.1 mouse_genomes_project 11 119928397 119930375 + MGP_129S1SvImJ_P0033549 Llgl2 protein_coding protein_coding MGP_129S1SvImJ_T0033550.1 MGP_129S1SvImJ_G0019402.1 mouse_genomes_project 11 119928826 119930179 + Llgl2 protein_coding retained_intron MGP_129S1SvImJ_T0033551.1 MGP_129S1SvImJ_G0019402.1 mouse_genomes_project 11 119929627 119930375 + Llgl2 protein_coding retained_intron MGP_129S1SvImJ_T0000869.1 MGP_129S1SvImJ_G0000802.1 mouse_genomes_project 11 16538097 16538953 - TEC TEC MGP_129S1SvImJ_T0031000.1 MGP_129S1SvImJ_G0018771.1 mouse_genomes_project 11 79231565 79244181 + MGP_129S1SvImJ_P0031000 Sdf2 protein_coding protein_coding MGP_129S1SvImJ_T0031001.1 MGP_129S1SvImJ_G0018771.1 mouse_genomes_project 11 79237898 79244181 + Sdf2 protein_coding processed_transcript MGP_129S1SvImJ_T0031002.1 MGP_129S1SvImJ_G0018771.1 mouse_genomes_project 11 79238371 79243802 + Sdf2 protein_coding retained_intron MGP_129S1SvImJ_T0003255.1 MGP_129S1SvImJ_G0003017.1 mouse_genomes_project 11 80787296 80792064 - Rab11fip4os2 antisense antisense MGP_129S1SvImJ_T0003256.1 MGP_129S1SvImJ_G0003017.1 mouse_genomes_project 11 80790847 80792109 - Rab11fip4os2 antisense antisense MGP_129S1SvImJ_T0032284.1 MGP_129S1SvImJ_G0019114.1 mouse_genomes_project 11 102467596 102468791 - MGP_129S1SvImJ_P0032284 protein_coding protein_coding MGP_129S1SvImJ_T0028796.1 MGP_129S1SvImJ_G0018229.1 mouse_genomes_project 11 48561225 48562161 + MGP_129S1SvImJ_P0028796 Olfr1387 protein_coding protein_coding MGP_129S1SvImJ_T0033532.1 MGP_129S1SvImJ_G0019401.1 mouse_genomes_project 11 119885335 119893410 + MGP_129S1SvImJ_P0033532 Tsen54 protein_coding protein_coding MGP_129S1SvImJ_T0033533.1 MGP_129S1SvImJ_G0019401.1 mouse_genomes_project 11 119885335 119893410 + MGP_129S1SvImJ_P0033533 Tsen54 protein_coding protein_coding MGP_129S1SvImJ_T0033534.1 MGP_129S1SvImJ_G0019401.1 mouse_genomes_project 11 119885357 119886157 + Tsen54 protein_coding retained_intron MGP_129S1SvImJ_T0033535.1 MGP_129S1SvImJ_G0019401.1 mouse_genomes_project 11 119885382 119890845 + Tsen54 protein_coding retained_intron MGP_129S1SvImJ_T0033536.1 MGP_129S1SvImJ_G0019401.1 mouse_genomes_project 11 119885416 119890824 + Tsen54 protein_coding retained_intron MGP_129S1SvImJ_T0033537.1 MGP_129S1SvImJ_G0019401.1 mouse_genomes_project 11 119886309 119892016 + MGP_129S1SvImJ_P0033537 Tsen54 protein_coding protein_coding MGP_129S1SvImJ_T0033538.1 MGP_129S1SvImJ_G0019401.1 mouse_genomes_project 11 119891026 119893405 + MGP_129S1SvImJ_P0033538 Tsen54 protein_coding protein_coding MGP_129S1SvImJ_T0033539.1 MGP_129S1SvImJ_G0019401.1 mouse_genomes_project 11 119891162 119892588 + MGP_129S1SvImJ_P0033539 Tsen54 protein_coding protein_coding MGP_129S1SvImJ_T0003278.1 MGP_129S1SvImJ_G0003034.1 mouse_genomes_project 11 90663816 90692647 + Scpep1os antisense antisense MGP_129S1SvImJ_T0029066.1 MGP_129S1SvImJ_G0018302.1 mouse_genomes_project 11 53057397 53119573 - MGP_129S1SvImJ_P0029066 Rad50 protein_coding protein_coding MGP_129S1SvImJ_T0029067.1 MGP_129S1SvImJ_G0018302.1 mouse_genomes_project 11 53083350 53119573 - MGP_129S1SvImJ_P0029067 Rad50 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029068.1 MGP_129S1SvImJ_G0018302.1 mouse_genomes_project 11 53088623 53090001 - Rad50 protein_coding processed_transcript MGP_129S1SvImJ_T0029069.1 MGP_129S1SvImJ_G0018302.1 mouse_genomes_project 11 53095097 53119549 - MGP_129S1SvImJ_P0029069 Rad50 protein_coding protein_coding MGP_129S1SvImJ_T0029070.1 MGP_129S1SvImJ_G0018302.1 mouse_genomes_project 11 53103849 53106930 - Rad50 protein_coding processed_transcript MGP_129S1SvImJ_T0033447.1 MGP_129S1SvImJ_G0019388.1 mouse_genomes_project 11 119485936 119500266 + MGP_129S1SvImJ_P0033447 Slc16a5 protein_coding protein_coding MGP_129S1SvImJ_T0033448.1 MGP_129S1SvImJ_G0019388.1 mouse_genomes_project 11 119485968 119495170 + MGP_129S1SvImJ_P0033448 Slc16a5 protein_coding protein_coding MGP_129S1SvImJ_T0033449.1 MGP_129S1SvImJ_G0019388.1 mouse_genomes_project 11 119486026 119495275 + Slc16a5 protein_coding processed_transcript MGP_129S1SvImJ_T0033450.1 MGP_129S1SvImJ_G0019388.1 mouse_genomes_project 11 119486071 119500238 + MGP_129S1SvImJ_P0033450 Slc16a5 protein_coding protein_coding MGP_129S1SvImJ_T0033451.1 MGP_129S1SvImJ_G0019388.1 mouse_genomes_project 11 119487262 119500266 + Slc16a5 protein_coding processed_transcript MGP_129S1SvImJ_T0033452.1 MGP_129S1SvImJ_G0019388.1 mouse_genomes_project 11 119487277 119488451 + Slc16a5 protein_coding processed_transcript MGP_129S1SvImJ_T0033453.1 MGP_129S1SvImJ_G0019388.1 mouse_genomes_project 11 119487280 119495275 + Slc16a5 protein_coding processed_transcript MGP_129S1SvImJ_T0033454.1 MGP_129S1SvImJ_G0019388.1 mouse_genomes_project 11 119487286 119495219 + Slc16a5 protein_coding processed_transcript MGP_129S1SvImJ_T0033455.1 MGP_129S1SvImJ_G0019388.1 mouse_genomes_project 11 119488002 119499474 + Slc16a5 protein_coding retained_intron MGP_129S1SvImJ_T0032348.1 MGP_129S1SvImJ_G0019153.1 mouse_genomes_project 11 103166774 103173170 - MGP_129S1SvImJ_P0032348 P3h4 protein_coding protein_coding MGP_129S1SvImJ_T0032349.1 MGP_129S1SvImJ_G0019153.1 mouse_genomes_project 11 103167684 103170208 - MGP_129S1SvImJ_P0032349 P3h4 protein_coding protein_coding MGP_129S1SvImJ_T0028251.1 MGP_129S1SvImJ_G0018085.1 mouse_genomes_project 11 20988898 21039404 + MGP_129S1SvImJ_P0028251 Xpo1 protein_coding protein_coding MGP_129S1SvImJ_T0028252.1 MGP_129S1SvImJ_G0018085.1 mouse_genomes_project 11 20988898 21039404 + MGP_129S1SvImJ_P0028252 Xpo1 protein_coding protein_coding MGP_129S1SvImJ_T0028253.1 MGP_129S1SvImJ_G0018085.1 mouse_genomes_project 11 20988912 21038040 + MGP_129S1SvImJ_P0028253 Xpo1 protein_coding protein_coding MGP_129S1SvImJ_T0028254.1 MGP_129S1SvImJ_G0018085.1 mouse_genomes_project 11 20988915 21022918 + Xpo1 protein_coding processed_transcript MGP_129S1SvImJ_T0028255.1 MGP_129S1SvImJ_G0018085.1 mouse_genomes_project 11 20988935 21040056 + MGP_129S1SvImJ_P0028255 Xpo1 protein_coding protein_coding MGP_129S1SvImJ_T0028256.1 MGP_129S1SvImJ_G0018085.1 mouse_genomes_project 11 20989446 21000572 + MGP_129S1SvImJ_P0028256 Xpo1 protein_coding protein_coding MGP_129S1SvImJ_T0028257.1 MGP_129S1SvImJ_G0018085.1 mouse_genomes_project 11 21026450 21029258 + MGP_129S1SvImJ_P0028257 Xpo1 protein_coding protein_coding MGP_129S1SvImJ_T0012707.1 MGP_129S1SvImJ_G0010796.1 mouse_genomes_project 11 82787773 82788592 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032528.1 MGP_129S1SvImJ_G0019193.1 mouse_genomes_project 11 104132716 104146708 - Becn1 protein_coding retained_intron MGP_129S1SvImJ_T0032529.1 MGP_129S1SvImJ_G0019193.1 mouse_genomes_project 11 104132716 104146716 - Becn1 protein_coding retained_intron MGP_129S1SvImJ_T0032530.1 MGP_129S1SvImJ_G0019193.1 mouse_genomes_project 11 104132716 104146742 - MGP_129S1SvImJ_P0032530 Becn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032531.1 MGP_129S1SvImJ_G0019193.1 mouse_genomes_project 11 104132718 104146745 - MGP_129S1SvImJ_P0032531 Becn1 protein_coding protein_coding MGP_129S1SvImJ_T0032532.1 MGP_129S1SvImJ_G0019193.1 mouse_genomes_project 11 104133330 104146693 - MGP_129S1SvImJ_P0032532 Becn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032533.1 MGP_129S1SvImJ_G0019193.1 mouse_genomes_project 11 104133342 104138497 - Becn1 protein_coding retained_intron MGP_129S1SvImJ_T0032534.1 MGP_129S1SvImJ_G0019193.1 mouse_genomes_project 11 104134334 104136954 - Becn1 protein_coding processed_transcript MGP_129S1SvImJ_T0032535.1 MGP_129S1SvImJ_G0019193.1 mouse_genomes_project 11 104134939 104146193 - MGP_129S1SvImJ_P0032535 Becn1 protein_coding protein_coding MGP_129S1SvImJ_T0032536.1 MGP_129S1SvImJ_G0019193.1 mouse_genomes_project 11 104135838 104140763 - MGP_129S1SvImJ_P0032536 Becn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032537.1 MGP_129S1SvImJ_G0019193.1 mouse_genomes_project 11 104135954 104146694 - MGP_129S1SvImJ_P0032537 Becn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032538.1 MGP_129S1SvImJ_G0019193.1 mouse_genomes_project 11 104135985 104139892 - Becn1 protein_coding retained_intron MGP_129S1SvImJ_T0032539.1 MGP_129S1SvImJ_G0019193.1 mouse_genomes_project 11 104140002 104146662 - MGP_129S1SvImJ_P0032539 Becn1 protein_coding protein_coding MGP_129S1SvImJ_T0032540.1 MGP_129S1SvImJ_G0019193.1 mouse_genomes_project 11 104140362 104146705 - MGP_129S1SvImJ_P0032540 Becn1 protein_coding protein_coding MGP_129S1SvImJ_T0032541.1 MGP_129S1SvImJ_G0019193.1 mouse_genomes_project 11 104140681 104146696 - Becn1 protein_coding retained_intron MGP_129S1SvImJ_T0032542.1 MGP_129S1SvImJ_G0019193.1 mouse_genomes_project 11 104142532 104146711 - Becn1 protein_coding processed_transcript MGP_129S1SvImJ_T0032543.1 MGP_129S1SvImJ_G0019193.1 mouse_genomes_project 11 104145916 104146697 - Becn1 protein_coding retained_intron MGP_129S1SvImJ_T0028721.1 MGP_129S1SvImJ_G0018204.1 mouse_genomes_project 11 47828366 47833008 + Rack1 protein_coding retained_intron MGP_129S1SvImJ_T0028722.1 MGP_129S1SvImJ_G0018204.1 mouse_genomes_project 11 47828391 47834122 + Rack1 protein_coding processed_transcript MGP_129S1SvImJ_T0028723.1 MGP_129S1SvImJ_G0018204.1 mouse_genomes_project 11 47828394 47834468 + MGP_129S1SvImJ_P0028723 Rack1 protein_coding protein_coding MGP_129S1SvImJ_T0028724.1 MGP_129S1SvImJ_G0018204.1 mouse_genomes_project 11 47828408 47830702 + Rack1 protein_coding retained_intron MGP_129S1SvImJ_T0028725.1 MGP_129S1SvImJ_G0018204.1 mouse_genomes_project 11 47831186 47834107 + Rack1 protein_coding processed_transcript MGP_129S1SvImJ_T0028726.1 MGP_129S1SvImJ_G0018204.1 mouse_genomes_project 11 47833481 47834127 + Rack1 protein_coding processed_transcript MGP_129S1SvImJ_T0028746.1 MGP_129S1SvImJ_G0018213.1 mouse_genomes_project 11 48047698 48101399 - MGP_129S1SvImJ_P0028746 protein_coding protein_coding MGP_129S1SvImJ_T0032299.1 MGP_129S1SvImJ_G0019129.1 mouse_genomes_project 11 102636917 102637838 + MGP_129S1SvImJ_P0032299 Gm11565 protein_coding protein_coding MGP_129S1SvImJ_T0012625.1 MGP_129S1SvImJ_G0010714.1 mouse_genomes_project 11 54441082 54441536 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033375.1 MGP_129S1SvImJ_G0019372.1 mouse_genomes_project 11 119114261 119132105 - MGP_129S1SvImJ_P0033375 Cd300lf protein_coding unknown_likely_coding MGP_129S1SvImJ_T0033376.1 MGP_129S1SvImJ_G0019372.1 mouse_genomes_project 11 119114264 119132216 - MGP_129S1SvImJ_P0033376 Cd300lf protein_coding protein_coding MGP_129S1SvImJ_T0033377.1 MGP_129S1SvImJ_G0019372.1 mouse_genomes_project 11 119114264 119132216 - MGP_129S1SvImJ_P0033377 Cd300lf protein_coding protein_coding MGP_129S1SvImJ_T0033378.1 MGP_129S1SvImJ_G0019372.1 mouse_genomes_project 11 119114264 119132216 - MGP_129S1SvImJ_P0033378 Cd300lf protein_coding protein_coding MGP_129S1SvImJ_T0033379.1 MGP_129S1SvImJ_G0019372.1 mouse_genomes_project 11 119116994 119132215 - Cd300lf protein_coding processed_transcript MGP_129S1SvImJ_T0033380.1 MGP_129S1SvImJ_G0019372.1 mouse_genomes_project 11 119118407 119124997 - Cd300lf protein_coding processed_transcript MGP_129S1SvImJ_T0033381.1 MGP_129S1SvImJ_G0019372.1 mouse_genomes_project 11 119118491 119124944 - Cd300lf protein_coding processed_transcript MGP_129S1SvImJ_T0033382.1 MGP_129S1SvImJ_G0019372.1 mouse_genomes_project 11 119118503 119124938 - Cd300lf protein_coding processed_transcript MGP_129S1SvImJ_T0012608.1 MGP_129S1SvImJ_G0010697.1 mouse_genomes_project 11 49523120 49523382 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003322.1 MGP_129S1SvImJ_G0003067.1 mouse_genomes_project 11 104912548 104913265 + Gm20659 antisense antisense MGP_129S1SvImJ_T0030369.1 MGP_129S1SvImJ_G0018614.1 mouse_genomes_project 11 71251293 71285692 + MGP_129S1SvImJ_P0030369 Kif1c protein_coding protein_coding MGP_129S1SvImJ_T0030370.1 MGP_129S1SvImJ_G0018614.1 mouse_genomes_project 11 71251293 71258315 + MGP_129S1SvImJ_P0030370 Kif1c protein_coding protein_coding MGP_129S1SvImJ_T0030371.1 MGP_129S1SvImJ_G0018614.1 mouse_genomes_project 11 71251306 71284113 + MGP_129S1SvImJ_P0030371 Kif1c protein_coding protein_coding MGP_129S1SvImJ_T0030372.1 MGP_129S1SvImJ_G0018614.1 mouse_genomes_project 11 71251321 71284150 + MGP_129S1SvImJ_P0030372 Kif1c protein_coding protein_coding MGP_129S1SvImJ_T0030373.1 MGP_129S1SvImJ_G0018614.1 mouse_genomes_project 11 71251395 71285692 + MGP_129S1SvImJ_P0030373 Kif1c protein_coding protein_coding MGP_129S1SvImJ_T0030279.1 MGP_129S1SvImJ_G0018597.1 mouse_genomes_project 11 70994096 70995019 + MGP_129S1SvImJ_P0030279 Zmynd15 protein_coding protein_coding MGP_129S1SvImJ_T0030280.1 MGP_129S1SvImJ_G0018597.1 mouse_genomes_project 11 70994293 70995053 + MGP_129S1SvImJ_P0030280 Zmynd15 protein_coding protein_coding MGP_129S1SvImJ_T0030281.1 MGP_129S1SvImJ_G0018597.1 mouse_genomes_project 11 70994352 71000356 + Zmynd15 protein_coding retained_intron MGP_129S1SvImJ_T0030282.1 MGP_129S1SvImJ_G0018597.1 mouse_genomes_project 11 70994721 71000247 + MGP_129S1SvImJ_P0030282 Zmynd15 protein_coding protein_coding MGP_129S1SvImJ_T0030283.1 MGP_129S1SvImJ_G0018597.1 mouse_genomes_project 11 70994726 71000366 + MGP_129S1SvImJ_P0030283 Zmynd15 protein_coding protein_coding MGP_129S1SvImJ_T0028223.1 MGP_129S1SvImJ_G0018077.1 mouse_genomes_project 11 20186233 20194846 + MGP_129S1SvImJ_P0028223 Tmem17 protein_coding protein_coding MGP_129S1SvImJ_T0031003.1 MGP_129S1SvImJ_G0018772.1 mouse_genomes_project 11 79253071 79255365 + 2610507B11Rik protein_coding processed_transcript MGP_129S1SvImJ_T0031004.1 MGP_129S1SvImJ_G0018772.1 mouse_genomes_project 11 79253071 79283835 + MGP_129S1SvImJ_P0031004 2610507B11Rik protein_coding protein_coding MGP_129S1SvImJ_T0031005.1 MGP_129S1SvImJ_G0018772.1 mouse_genomes_project 11 79253804 79255299 + 2610507B11Rik protein_coding retained_intron MGP_129S1SvImJ_T0031006.1 MGP_129S1SvImJ_G0018772.1 mouse_genomes_project 11 79257465 79259513 + 2610507B11Rik protein_coding retained_intron MGP_129S1SvImJ_T0031007.1 MGP_129S1SvImJ_G0018772.1 mouse_genomes_project 11 79263303 79264757 + 2610507B11Rik protein_coding retained_intron MGP_129S1SvImJ_T0031008.1 MGP_129S1SvImJ_G0018772.1 mouse_genomes_project 11 79264483 79266220 + MGP_129S1SvImJ_P0031008 2610507B11Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031009.1 MGP_129S1SvImJ_G0018772.1 mouse_genomes_project 11 79276743 79279258 + 2610507B11Rik protein_coding retained_intron MGP_129S1SvImJ_T0031010.1 MGP_129S1SvImJ_G0018772.1 mouse_genomes_project 11 79279214 79282088 + 2610507B11Rik protein_coding retained_intron MGP_129S1SvImJ_T0029786.1 MGP_129S1SvImJ_G0018491.1 mouse_genomes_project 11 67767197 67983363 + Gas7 protein_coding processed_transcript MGP_129S1SvImJ_T0029787.1 MGP_129S1SvImJ_G0018491.1 mouse_genomes_project 11 67865684 67903722 + Gas7 protein_coding processed_transcript MGP_129S1SvImJ_T0029788.1 MGP_129S1SvImJ_G0018491.1 mouse_genomes_project 11 67904689 67923604 + Gas7 protein_coding processed_transcript MGP_129S1SvImJ_T0029789.1 MGP_129S1SvImJ_G0018491.1 mouse_genomes_project 11 67904725 68007787 + MGP_129S1SvImJ_P0029789 Gas7 protein_coding protein_coding MGP_129S1SvImJ_T0029790.1 MGP_129S1SvImJ_G0018491.1 mouse_genomes_project 11 67914712 68007765 + MGP_129S1SvImJ_P0029790 Gas7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0029791.1 MGP_129S1SvImJ_G0018491.1 mouse_genomes_project 11 67914749 67988584 + Gas7 protein_coding processed_transcript MGP_129S1SvImJ_T0029792.1 MGP_129S1SvImJ_G0018491.1 mouse_genomes_project 11 67914759 67983348 + Gas7 protein_coding processed_transcript MGP_129S1SvImJ_T0029793.1 MGP_129S1SvImJ_G0018491.1 mouse_genomes_project 11 67970620 68002525 + Gas7 protein_coding processed_transcript MGP_129S1SvImJ_T0029795.1 MGP_129S1SvImJ_G0018491.1 mouse_genomes_project 11 68001008 68002401 + Gas7 protein_coding processed_transcript MGP_129S1SvImJ_T0102144.1 MGP_129S1SvImJ_G0039979.1 mouse_genomes_project 11 74976986 74977996 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0003294.1 MGP_129S1SvImJ_G0003045.1 mouse_genomes_project 11 98649413 98655206 - Gm11536 antisense antisense MGP_129S1SvImJ_T0030584.1 MGP_129S1SvImJ_G0018668.1 mouse_genomes_project 11 74215079 74216018 - MGP_129S1SvImJ_P0030584 Olfr382 protein_coding protein_coding MGP_129S1SvImJ_T0011325.1 MGP_129S1SvImJ_G0009441.1 mouse_genomes_project 11 73451176 73451368 - Gm22075 misc_RNA misc_RNA MGP_129S1SvImJ_T0029794.1 MGP_129S1SvImJ_G0018492.1 mouse_genomes_project 11 67979529 68076747 - MGP_129S1SvImJ_P0029794 Glp2r protein_coding protein_coding MGP_129S1SvImJ_T0029797.1 MGP_129S1SvImJ_G0018492.1 mouse_genomes_project 11 68024704 68090642 - MGP_129S1SvImJ_P0029797 Glp2r protein_coding protein_coding MGP_129S1SvImJ_T0029782.1 MGP_129S1SvImJ_G0018490.1 mouse_genomes_project 11 67625604 67678902 + MGP_129S1SvImJ_P0029782 Myh13 protein_coding protein_coding MGP_129S1SvImJ_T0029783.1 MGP_129S1SvImJ_G0018490.1 mouse_genomes_project 11 67625726 67678902 + MGP_129S1SvImJ_P0029783 Myh13 protein_coding protein_coding MGP_129S1SvImJ_T0029784.1 MGP_129S1SvImJ_G0018490.1 mouse_genomes_project 11 67632277 67678818 + MGP_129S1SvImJ_P0029784 Myh13 protein_coding protein_coding MGP_129S1SvImJ_T0029785.1 MGP_129S1SvImJ_G0018490.1 mouse_genomes_project 11 67672104 67676520 + MGP_129S1SvImJ_P0029785 Myh13 protein_coding protein_coding MGP_129S1SvImJ_T0031718.1 MGP_129S1SvImJ_G0018956.1 mouse_genomes_project 11 96499101 96569832 - MGP_129S1SvImJ_P0031718 Cacna1g protein_coding protein_coding MGP_129S1SvImJ_T0031719.1 MGP_129S1SvImJ_G0018956.1 mouse_genomes_project 11 96499101 96569832 - MGP_129S1SvImJ_P0031719 Cacna1g protein_coding protein_coding MGP_129S1SvImJ_T0031720.1 MGP_129S1SvImJ_G0018956.1 mouse_genomes_project 11 96499101 96569832 - MGP_129S1SvImJ_P0031720 Cacna1g protein_coding protein_coding MGP_129S1SvImJ_T0031721.1 MGP_129S1SvImJ_G0018956.1 mouse_genomes_project 11 96499101 96569832 - MGP_129S1SvImJ_P0031721 Cacna1g protein_coding protein_coding MGP_129S1SvImJ_T0031722.1 MGP_129S1SvImJ_G0018956.1 mouse_genomes_project 11 96499101 96569832 - MGP_129S1SvImJ_P0031722 Cacna1g protein_coding protein_coding MGP_129S1SvImJ_T0031723.1 MGP_129S1SvImJ_G0018956.1 mouse_genomes_project 11 96499101 96569832 - MGP_129S1SvImJ_P0031723 Cacna1g protein_coding protein_coding MGP_129S1SvImJ_T0031724.1 MGP_129S1SvImJ_G0018956.1 mouse_genomes_project 11 96499101 96569832 - MGP_129S1SvImJ_P0031724 Cacna1g protein_coding protein_coding MGP_129S1SvImJ_T0031725.1 MGP_129S1SvImJ_G0018956.1 mouse_genomes_project 11 96499101 96569832 - MGP_129S1SvImJ_P0031725 Cacna1g protein_coding protein_coding MGP_129S1SvImJ_T0031726.1 MGP_129S1SvImJ_G0018956.1 mouse_genomes_project 11 96499101 96569832 - MGP_129S1SvImJ_P0031726 Cacna1g protein_coding protein_coding MGP_129S1SvImJ_T0031727.1 MGP_129S1SvImJ_G0018956.1 mouse_genomes_project 11 96499116 96569930 - MGP_129S1SvImJ_P0031727 Cacna1g protein_coding protein_coding MGP_129S1SvImJ_T0031728.1 MGP_129S1SvImJ_G0018956.1 mouse_genomes_project 11 96499345 96569832 - MGP_129S1SvImJ_P0031728 Cacna1g protein_coding protein_coding MGP_129S1SvImJ_T0031729.1 MGP_129S1SvImJ_G0018956.1 mouse_genomes_project 11 96500562 96502399 - Cacna1g protein_coding processed_transcript MGP_129S1SvImJ_T0031730.1 MGP_129S1SvImJ_G0018956.1 mouse_genomes_project 11 96502200 96507909 - Cacna1g protein_coding processed_transcript MGP_129S1SvImJ_T0031731.1 MGP_129S1SvImJ_G0018956.1 mouse_genomes_project 11 96509533 96515031 - Cacna1g protein_coding processed_transcript MGP_129S1SvImJ_T0031732.1 MGP_129S1SvImJ_G0018956.1 mouse_genomes_project 11 96516621 96517844 - Cacna1g protein_coding processed_transcript MGP_129S1SvImJ_T0031733.1 MGP_129S1SvImJ_G0018956.1 mouse_genomes_project 11 96518333 96569373 - Cacna1g protein_coding processed_transcript MGP_129S1SvImJ_T0098302.1 MGP_129S1SvImJ_G0036387.1 mouse_genomes_project 11 117280219 117284257 + pseudogene pseudogene MGP_129S1SvImJ_T0012590.1 MGP_129S1SvImJ_G0010679.1 mouse_genomes_project 11 42396158 42397359 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0030095.1 MGP_129S1SvImJ_G0018564.1 mouse_genomes_project 11 70362803 70365955 - MGP_129S1SvImJ_P0030095 Kctd11 protein_coding protein_coding MGP_129S1SvImJ_T0033259.1 MGP_129S1SvImJ_G0019343.1 mouse_genomes_project 11 113791494 113863953 - MGP_129S1SvImJ_P0033259 Abca6 protein_coding protein_coding MGP_129S1SvImJ_T0033260.1 MGP_129S1SvImJ_G0019343.1 mouse_genomes_project 11 113847781 113863953 - Abca6 protein_coding processed_transcript MGP_129S1SvImJ_T0030215.1 MGP_129S1SvImJ_G0018583.1 mouse_genomes_project 11 70675867 70685635 + MGP_129S1SvImJ_P0030215 Clec10a protein_coding protein_coding MGP_129S1SvImJ_T0030216.1 MGP_129S1SvImJ_G0018583.1 mouse_genomes_project 11 70675943 70677909 + MGP_129S1SvImJ_P0030216 Clec10a protein_coding protein_coding MGP_129S1SvImJ_T0030217.1 MGP_129S1SvImJ_G0018583.1 mouse_genomes_project 11 70676907 70677217 + MGP_129S1SvImJ_P0030217 Clec10a protein_coding protein_coding MGP_129S1SvImJ_T0030218.1 MGP_129S1SvImJ_G0018583.1 mouse_genomes_project 11 70677156 70685376 + MGP_129S1SvImJ_P0030218 Clec10a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0033916.1 MGP_129S1SvImJ_G0019475.1 mouse_genomes_project 11 123499178 123572991 - MGP_129S1SvImJ_P0033916 Tbc1d16 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0033917.1 MGP_129S1SvImJ_G0019475.1 mouse_genomes_project 11 123499186 123591813 - MGP_129S1SvImJ_P0033917 Tbc1d16 protein_coding protein_coding MGP_129S1SvImJ_T0033918.1 MGP_129S1SvImJ_G0019475.1 mouse_genomes_project 11 123568344 123581977 - MGP_129S1SvImJ_P0033918 Tbc1d16 protein_coding protein_coding MGP_129S1SvImJ_T0033198.1 MGP_129S1SvImJ_G0019328.1 mouse_genomes_project 11 112406809 112445193 + MGP_129S1SvImJ_P0033198 Axin2 protein_coding protein_coding MGP_129S1SvImJ_T0033199.1 MGP_129S1SvImJ_G0019328.1 mouse_genomes_project 11 112407260 112411697 + MGP_129S1SvImJ_P0033199 Axin2 protein_coding protein_coding MGP_129S1SvImJ_T0033200.1 MGP_129S1SvImJ_G0019328.1 mouse_genomes_project 11 112407797 112411712 + MGP_129S1SvImJ_P0033200 Axin2 protein_coding protein_coding MGP_129S1SvImJ_T0033201.1 MGP_129S1SvImJ_G0019328.1 mouse_genomes_project 11 112408109 112411608 + MGP_129S1SvImJ_P0033201 Axin2 protein_coding protein_coding MGP_129S1SvImJ_T0033202.1 MGP_129S1SvImJ_G0019328.1 mouse_genomes_project 11 112411294 112443921 + MGP_129S1SvImJ_P0033202 Axin2 protein_coding protein_coding MGP_129S1SvImJ_T0033203.1 MGP_129S1SvImJ_G0019328.1 mouse_genomes_project 11 112432244 112435927 + Axin2 protein_coding processed_transcript MGP_129S1SvImJ_T0033204.1 MGP_129S1SvImJ_G0019328.1 mouse_genomes_project 11 112438029 112445193 + Axin2 protein_coding processed_transcript MGP_129S1SvImJ_T0034038.1 MGP_129S1SvImJ_G0019496.1 mouse_genomes_project 11 124817892 124824527 + MGP_129S1SvImJ_P0034038 Fscn2 protein_coding protein_coding MGP_129S1SvImJ_T0034039.1 MGP_129S1SvImJ_G0019496.1 mouse_genomes_project 11 124822900 124824307 + Fscn2 protein_coding processed_transcript MGP_129S1SvImJ_T0034040.1 MGP_129S1SvImJ_G0019496.1 mouse_genomes_project 11 124823071 124824179 + Fscn2 protein_coding processed_transcript MGP_129S1SvImJ_T0033299.1 MGP_129S1SvImJ_G0019352.1 mouse_genomes_project 11 117514853 117525091 + MGP_129S1SvImJ_P0033299 D11Wsu47e protein_coding protein_coding MGP_129S1SvImJ_T0033300.1 MGP_129S1SvImJ_G0019352.1 mouse_genomes_project 11 117514881 117518658 + MGP_129S1SvImJ_P0033300 D11Wsu47e protein_coding protein_coding MGP_129S1SvImJ_T0033301.1 MGP_129S1SvImJ_G0019352.1 mouse_genomes_project 11 117514888 117525091 + MGP_129S1SvImJ_P0033301 D11Wsu47e protein_coding protein_coding MGP_129S1SvImJ_T0033302.1 MGP_129S1SvImJ_G0019352.1 mouse_genomes_project 11 117515527 117518573 + MGP_129S1SvImJ_P0033302 D11Wsu47e protein_coding protein_coding MGP_129S1SvImJ_T0030155.1 MGP_129S1SvImJ_G0018573.1 mouse_genomes_project 11 70458051 70470815 - MGP_129S1SvImJ_P0030155 Elp5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030156.1 MGP_129S1SvImJ_G0018573.1 mouse_genomes_project 11 70458053 70474153 - MGP_129S1SvImJ_P0030156 Elp5 protein_coding protein_coding MGP_129S1SvImJ_T0030157.1 MGP_129S1SvImJ_G0018573.1 mouse_genomes_project 11 70458057 70470806 - Elp5 protein_coding retained_intron MGP_129S1SvImJ_T0030158.1 MGP_129S1SvImJ_G0018573.1 mouse_genomes_project 11 70458061 70459233 - Elp5 protein_coding retained_intron MGP_129S1SvImJ_T0030159.1 MGP_129S1SvImJ_G0018573.1 mouse_genomes_project 11 70459070 70470604 - MGP_129S1SvImJ_P0030159 Elp5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030160.1 MGP_129S1SvImJ_G0018573.1 mouse_genomes_project 11 70459344 70470804 - Elp5 protein_coding retained_intron MGP_129S1SvImJ_T0030161.1 MGP_129S1SvImJ_G0018573.1 mouse_genomes_project 11 70460541 70470754 - Elp5 protein_coding retained_intron MGP_129S1SvImJ_T0030162.1 MGP_129S1SvImJ_G0018573.1 mouse_genomes_project 11 70460559 70474540 - MGP_129S1SvImJ_P0030162 Elp5 protein_coding protein_coding MGP_129S1SvImJ_T0030163.1 MGP_129S1SvImJ_G0018573.1 mouse_genomes_project 11 70465645 70475418 - MGP_129S1SvImJ_P0030163 Elp5 protein_coding protein_coding MGP_129S1SvImJ_T0030164.1 MGP_129S1SvImJ_G0018573.1 mouse_genomes_project 11 70470577 70471239 - MGP_129S1SvImJ_P0030164 Elp5 protein_coding protein_coding MGP_129S1SvImJ_T0006393.1 MGP_129S1SvImJ_G0005328.1 mouse_genomes_project 11 123459126 123464211 - Gm11754 lincRNA lincRNA MGP_129S1SvImJ_T0029205.1 MGP_129S1SvImJ_G0018335.1 mouse_genomes_project 11 56600236 56934078 + MGP_129S1SvImJ_P0029205 Gria1 protein_coding protein_coding MGP_129S1SvImJ_T0029206.1 MGP_129S1SvImJ_G0018335.1 mouse_genomes_project 11 56600382 56934077 + MGP_129S1SvImJ_P0029206 Gria1 protein_coding protein_coding MGP_129S1SvImJ_T0029207.1 MGP_129S1SvImJ_G0018335.1 mouse_genomes_project 11 56600460 56931461 + MGP_129S1SvImJ_P0029207 Gria1 protein_coding protein_coding MGP_129S1SvImJ_T0029208.1 MGP_129S1SvImJ_G0018335.1 mouse_genomes_project 11 56773255 56790397 + Gria1 protein_coding processed_transcript MGP_129S1SvImJ_T0028865.1 MGP_129S1SvImJ_G0018249.1 mouse_genomes_project 11 49557329 49566868 + MGP_129S1SvImJ_P0028865 Hnrnph1 protein_coding protein_coding MGP_129S1SvImJ_T0028866.1 MGP_129S1SvImJ_G0018249.1 mouse_genomes_project 11 49558090 49566868 + Hnrnph1 protein_coding processed_transcript MGP_129S1SvImJ_T0028867.1 MGP_129S1SvImJ_G0018249.1 mouse_genomes_project 11 49558104 49562946 + Hnrnph1 protein_coding processed_transcript MGP_129S1SvImJ_T0028868.1 MGP_129S1SvImJ_G0018249.1 mouse_genomes_project 11 49558108 49566261 + Hnrnph1 protein_coding processed_transcript MGP_129S1SvImJ_T0028869.1 MGP_129S1SvImJ_G0018249.1 mouse_genomes_project 11 49558108 49563532 + Hnrnph1 protein_coding processed_transcript MGP_129S1SvImJ_T0028870.1 MGP_129S1SvImJ_G0018249.1 mouse_genomes_project 11 49558630 49562477 + Hnrnph1 protein_coding processed_transcript MGP_129S1SvImJ_T0028871.1 MGP_129S1SvImJ_G0018249.1 mouse_genomes_project 11 49558630 49560530 + Hnrnph1 protein_coding processed_transcript MGP_129S1SvImJ_T0028872.1 MGP_129S1SvImJ_G0018249.1 mouse_genomes_project 11 49558630 49561310 + Hnrnph1 protein_coding processed_transcript MGP_129S1SvImJ_T0028873.1 MGP_129S1SvImJ_G0018249.1 mouse_genomes_project 11 49558640 49566263 + Hnrnph1 protein_coding processed_transcript MGP_129S1SvImJ_T0028874.1 MGP_129S1SvImJ_G0018249.1 mouse_genomes_project 11 49563286 49564600 + Hnrnph1 protein_coding processed_transcript MGP_129S1SvImJ_T0028875.1 MGP_129S1SvImJ_G0018249.1 mouse_genomes_project 11 49563426 49564373 + Hnrnph1 protein_coding processed_transcript MGP_129S1SvImJ_T0028876.1 MGP_129S1SvImJ_G0018249.1 mouse_genomes_project 11 49563581 49564260 + Hnrnph1 protein_coding processed_transcript MGP_129S1SvImJ_T0028877.1 MGP_129S1SvImJ_G0018249.1 mouse_genomes_project 11 49564151 49565033 + Hnrnph1 protein_coding processed_transcript MGP_129S1SvImJ_T0012532.1 MGP_129S1SvImJ_G0010621.1 mouse_genomes_project 11 18875819 18875999 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009680.1 MGP_129S1SvImJ_G0007796.1 mouse_genomes_project 11 42127278 42127343 - Mir146 miRNA miRNA MGP_129S1SvImJ_T0012662.1 MGP_129S1SvImJ_G0010751.1 mouse_genomes_project 11 66816037 66817016 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0030169.1 MGP_129S1SvImJ_G0018575.1 mouse_genomes_project 11 70485722 70491833 + MGP_129S1SvImJ_P0030169 Gabarap protein_coding protein_coding MGP_129S1SvImJ_T0030170.1 MGP_129S1SvImJ_G0018575.1 mouse_genomes_project 11 70486218 70491822 + MGP_129S1SvImJ_P0030170 Gabarap protein_coding protein_coding MGP_129S1SvImJ_T0030171.1 MGP_129S1SvImJ_G0018575.1 mouse_genomes_project 11 70486263 70491817 + Gabarap protein_coding retained_intron MGP_129S1SvImJ_T0030172.1 MGP_129S1SvImJ_G0018575.1 mouse_genomes_project 11 70486386 70487181 + Gabarap protein_coding processed_transcript MGP_129S1SvImJ_T0030624.1 MGP_129S1SvImJ_G0018691.1 mouse_genomes_project 11 75015392 75016340 - MGP_129S1SvImJ_P0030624 Olfr410 protein_coding protein_coding MGP_129S1SvImJ_T0009767.1 MGP_129S1SvImJ_G0007883.1 mouse_genomes_project 11 107394371 107394442 - miRNA miRNA MGP_129S1SvImJ_T0012739.1 MGP_129S1SvImJ_G0010828.1 mouse_genomes_project 11 98711282 98711837 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006206.1 MGP_129S1SvImJ_G0005185.1 mouse_genomes_project 11 20890162 20904909 + 1700061J23Rik lincRNA lincRNA MGP_129S1SvImJ_T0006256.1 MGP_129S1SvImJ_G0005227.1 mouse_genomes_project 11 51422163 51425413 - 9430098F02Rik lincRNA lincRNA MGP_129S1SvImJ_T0006193.1 MGP_129S1SvImJ_G0005173.1 mouse_genomes_project 11 15897606 15924435 - Gm12022 lincRNA lincRNA MGP_129S1SvImJ_T0017295.1 MGP_129S1SvImJ_G0015216.1 mouse_genomes_project 11 110945143 110963051 - A830035A12Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0031694.1 MGP_129S1SvImJ_G0018951.1 mouse_genomes_project 11 96303906 96310052 - MGP_129S1SvImJ_P0031694 Wfikkn2 protein_coding protein_coding MGP_129S1SvImJ_T0031695.1 MGP_129S1SvImJ_G0018951.1 mouse_genomes_project 11 96309791 96315508 - Wfikkn2 protein_coding processed_transcript MGP_129S1SvImJ_T0012611.1 MGP_129S1SvImJ_G0010700.1 mouse_genomes_project 11 51724977 51725140 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006203.1 MGP_129S1SvImJ_G0005182.1 mouse_genomes_project 11 20298759 20299839 + Gm12052 lincRNA lincRNA MGP_129S1SvImJ_T0031444.1 MGP_129S1SvImJ_G0018889.1 mouse_genomes_project 11 88041277 88057684 + MGP_129S1SvImJ_P0031444 Rnft1 protein_coding protein_coding MGP_129S1SvImJ_T0031445.1 MGP_129S1SvImJ_G0018889.1 mouse_genomes_project 11 88041305 88048033 + Rnft1 protein_coding processed_transcript MGP_129S1SvImJ_T0031446.1 MGP_129S1SvImJ_G0018889.1 mouse_genomes_project 11 88041350 88042726 + Rnft1 protein_coding processed_transcript MGP_129S1SvImJ_T0027839.1 MGP_129S1SvImJ_G0017990.1 mouse_genomes_project 11 1872034 1892820 + MGP_129S1SvImJ_P0027839 Nipsnap1 protein_coding protein_coding MGP_129S1SvImJ_T0027840.1 MGP_129S1SvImJ_G0017990.1 mouse_genomes_project 11 1872082 1892237 + MGP_129S1SvImJ_P0027840 Nipsnap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027841.1 MGP_129S1SvImJ_G0017990.1 mouse_genomes_project 11 1872088 1883416 + Nipsnap1 protein_coding processed_transcript MGP_129S1SvImJ_T0027842.1 MGP_129S1SvImJ_G0017990.1 mouse_genomes_project 11 1882197 1887755 + MGP_129S1SvImJ_P0027842 Nipsnap1 protein_coding protein_coding MGP_129S1SvImJ_T0027843.1 MGP_129S1SvImJ_G0017990.1 mouse_genomes_project 11 1882209 1888597 + Nipsnap1 protein_coding processed_transcript MGP_129S1SvImJ_T0027844.1 MGP_129S1SvImJ_G0017990.1 mouse_genomes_project 11 1882267 1883128 + Nipsnap1 protein_coding processed_transcript MGP_129S1SvImJ_T0012693.1 MGP_129S1SvImJ_G0010782.1 mouse_genomes_project 11 78563460 78563640 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028716.1 MGP_129S1SvImJ_G0018202.1 mouse_genomes_project 11 45861726 46578112 - MGP_129S1SvImJ_P0028716 Sgcd protein_coding protein_coding MGP_129S1SvImJ_T0028717.1 MGP_129S1SvImJ_G0018202.1 mouse_genomes_project 11 45953687 46367684 - MGP_129S1SvImJ_P0028717 Sgcd protein_coding protein_coding MGP_129S1SvImJ_T0028718.1 MGP_129S1SvImJ_G0018202.1 mouse_genomes_project 11 46338721 46635591 - Sgcd protein_coding processed_transcript MGP_129S1SvImJ_T0028720.1 MGP_129S1SvImJ_G0018202.1 mouse_genomes_project 11 46577951 46989454 - Sgcd protein_coding processed_transcript MGP_129S1SvImJ_T0099233.1 MGP_129S1SvImJ_G0037300.1 mouse_genomes_project 11 33253468 33253575 + Gm25799 snRNA snRNA MGP_129S1SvImJ_T0031098.1 MGP_129S1SvImJ_G0018795.1 mouse_genomes_project 11 80384681 80385409 - MGP_129S1SvImJ_P0031098 Gm9964 protein_coding protein_coding MGP_129S1SvImJ_T0012769.1 MGP_129S1SvImJ_G0010858.1 mouse_genomes_project 11 108383197 108385042 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0030810.1 MGP_129S1SvImJ_G0018732.1 mouse_genomes_project 11 77068435 77075349 + MGP_129S1SvImJ_P0030810 Rnmtl1 protein_coding protein_coding MGP_129S1SvImJ_T0030811.1 MGP_129S1SvImJ_G0018732.1 mouse_genomes_project 11 77068456 77069604 + Rnmtl1 protein_coding retained_intron MGP_129S1SvImJ_T0030812.1 MGP_129S1SvImJ_G0018732.1 mouse_genomes_project 11 77073940 77075237 + Rnmtl1 protein_coding processed_transcript MGP_129S1SvImJ_T0030110.1 MGP_129S1SvImJ_G0018567.1 mouse_genomes_project 11 70388003 70390342 + Neurl4 protein_coding processed_transcript MGP_129S1SvImJ_T0030111.1 MGP_129S1SvImJ_G0018567.1 mouse_genomes_project 11 70388746 70400452 + MGP_129S1SvImJ_P0030111 Neurl4 protein_coding protein_coding MGP_129S1SvImJ_T0030112.1 MGP_129S1SvImJ_G0018567.1 mouse_genomes_project 11 70388746 70400452 + MGP_129S1SvImJ_P0030112 Neurl4 protein_coding protein_coding MGP_129S1SvImJ_T0030113.1 MGP_129S1SvImJ_G0018567.1 mouse_genomes_project 11 70388746 70400452 + MGP_129S1SvImJ_P0030113 Neurl4 protein_coding protein_coding MGP_129S1SvImJ_T0030114.1 MGP_129S1SvImJ_G0018567.1 mouse_genomes_project 11 70388821 70400757 + MGP_129S1SvImJ_P0030114 Neurl4 protein_coding protein_coding MGP_129S1SvImJ_T0030115.1 MGP_129S1SvImJ_G0018567.1 mouse_genomes_project 11 70388957 70392539 + Neurl4 protein_coding retained_intron MGP_129S1SvImJ_T0030116.1 MGP_129S1SvImJ_G0018567.1 mouse_genomes_project 11 70389086 70390857 + Neurl4 protein_coding processed_transcript MGP_129S1SvImJ_T0030117.1 MGP_129S1SvImJ_G0018567.1 mouse_genomes_project 11 70390334 70400268 + MGP_129S1SvImJ_P0030117 Neurl4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030118.1 MGP_129S1SvImJ_G0018567.1 mouse_genomes_project 11 70390977 70395677 + MGP_129S1SvImJ_P0030118 Neurl4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030119.1 MGP_129S1SvImJ_G0018567.1 mouse_genomes_project 11 70394205 70395463 + Neurl4 protein_coding retained_intron MGP_129S1SvImJ_T0030120.1 MGP_129S1SvImJ_G0018567.1 mouse_genomes_project 11 70395576 70397263 + Neurl4 protein_coding retained_intron MGP_129S1SvImJ_T0030121.1 MGP_129S1SvImJ_G0018567.1 mouse_genomes_project 11 70395917 70397804 + Neurl4 protein_coding retained_intron MGP_129S1SvImJ_T0030122.1 MGP_129S1SvImJ_G0018567.1 mouse_genomes_project 11 70397974 70400089 + MGP_129S1SvImJ_P0030122 Neurl4 protein_coding protein_coding MGP_129S1SvImJ_T0029240.1 MGP_129S1SvImJ_G0018346.1 mouse_genomes_project 11 57879086 57906834 + MGP_129S1SvImJ_P0029240 Irgm2 protein_coding protein_coding MGP_129S1SvImJ_T0029241.1 MGP_129S1SvImJ_G0018346.1 mouse_genomes_project 11 57899005 57906842 + MGP_129S1SvImJ_P0029241 Irgm2 protein_coding protein_coding MGP_129S1SvImJ_T0033113.1 MGP_129S1SvImJ_G0019313.1 mouse_genomes_project 11 110115266 110125362 - MGP_129S1SvImJ_P0033113 Ddx5 protein_coding protein_coding MGP_129S1SvImJ_T0033114.1 MGP_129S1SvImJ_G0019313.1 mouse_genomes_project 11 110118221 110125146 - MGP_129S1SvImJ_P0033114 Ddx5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0033115.1 MGP_129S1SvImJ_G0019313.1 mouse_genomes_project 11 110118973 110120492 - Ddx5 protein_coding processed_transcript MGP_129S1SvImJ_T0033116.1 MGP_129S1SvImJ_G0019313.1 mouse_genomes_project 11 110118973 110125318 - MGP_129S1SvImJ_P0033116 Ddx5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033117.1 MGP_129S1SvImJ_G0019313.1 mouse_genomes_project 11 110120144 110125297 - Ddx5 protein_coding processed_transcript MGP_129S1SvImJ_T0033118.1 MGP_129S1SvImJ_G0019313.1 mouse_genomes_project 11 110120573 110121887 - Ddx5 protein_coding retained_intron MGP_129S1SvImJ_T0033119.1 MGP_129S1SvImJ_G0019313.1 mouse_genomes_project 11 110121983 110122891 - Ddx5 protein_coding processed_transcript MGP_129S1SvImJ_T0033120.1 MGP_129S1SvImJ_G0019313.1 mouse_genomes_project 11 110122336 110126015 - MGP_129S1SvImJ_P0033120 Ddx5 protein_coding protein_coding MGP_129S1SvImJ_T0033121.1 MGP_129S1SvImJ_G0019313.1 mouse_genomes_project 11 110122911 110125713 - MGP_129S1SvImJ_P0033121 Ddx5 protein_coding protein_coding MGP_129S1SvImJ_T0012741.1 MGP_129S1SvImJ_G0010830.1 mouse_genomes_project 11 99228615 99229422 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028914.1 MGP_129S1SvImJ_G0018262.1 mouse_genomes_project 11 50207461 50208439 + MGP_129S1SvImJ_P0028914 Olfr51 protein_coding protein_coding MGP_129S1SvImJ_T0003318.1 MGP_129S1SvImJ_G0003063.1 mouse_genomes_project 11 104324602 104325417 - Gm11626 antisense antisense MGP_129S1SvImJ_T0029117.1 MGP_129S1SvImJ_G0018314.1 mouse_genomes_project 11 53776012 53836563 + MGP_129S1SvImJ_P0029117 Acsl6 protein_coding protein_coding MGP_129S1SvImJ_T0029118.1 MGP_129S1SvImJ_G0018314.1 mouse_genomes_project 11 53776219 53833325 + MGP_129S1SvImJ_P0029118 Acsl6 protein_coding protein_coding MGP_129S1SvImJ_T0029119.1 MGP_129S1SvImJ_G0018314.1 mouse_genomes_project 11 53776236 53798021 + MGP_129S1SvImJ_P0029119 Acsl6 protein_coding protein_coding MGP_129S1SvImJ_T0029120.1 MGP_129S1SvImJ_G0018314.1 mouse_genomes_project 11 53776416 53833329 + MGP_129S1SvImJ_P0029120 Acsl6 protein_coding protein_coding MGP_129S1SvImJ_T0029121.1 MGP_129S1SvImJ_G0018314.1 mouse_genomes_project 11 53776416 53836559 + MGP_129S1SvImJ_P0029121 Acsl6 protein_coding protein_coding MGP_129S1SvImJ_T0029122.1 MGP_129S1SvImJ_G0018314.1 mouse_genomes_project 11 53785877 53797474 + MGP_129S1SvImJ_P0029122 Acsl6 protein_coding protein_coding MGP_129S1SvImJ_T0029123.1 MGP_129S1SvImJ_G0018314.1 mouse_genomes_project 11 53787133 53832987 + MGP_129S1SvImJ_P0029123 Acsl6 protein_coding protein_coding MGP_129S1SvImJ_T0029124.1 MGP_129S1SvImJ_G0018314.1 mouse_genomes_project 11 53787173 53833325 + MGP_129S1SvImJ_P0029124 Acsl6 protein_coding protein_coding MGP_129S1SvImJ_T0029125.1 MGP_129S1SvImJ_G0018314.1 mouse_genomes_project 11 53787173 53833325 + MGP_129S1SvImJ_P0029125 Acsl6 protein_coding protein_coding MGP_129S1SvImJ_T0029126.1 MGP_129S1SvImJ_G0018314.1 mouse_genomes_project 11 53787225 53810967 + MGP_129S1SvImJ_P0029126 Acsl6 protein_coding protein_coding MGP_129S1SvImJ_T0029127.1 MGP_129S1SvImJ_G0018314.1 mouse_genomes_project 11 53787225 53809402 + MGP_129S1SvImJ_P0029127 Acsl6 protein_coding protein_coding MGP_129S1SvImJ_T0029128.1 MGP_129S1SvImJ_G0018314.1 mouse_genomes_project 11 53792141 53833291 + MGP_129S1SvImJ_P0029128 Acsl6 protein_coding protein_coding MGP_129S1SvImJ_T0029129.1 MGP_129S1SvImJ_G0018314.1 mouse_genomes_project 11 53792437 53810745 + MGP_129S1SvImJ_P0029129 Acsl6 protein_coding protein_coding MGP_129S1SvImJ_T0029130.1 MGP_129S1SvImJ_G0018314.1 mouse_genomes_project 11 53807171 53833329 + Acsl6 protein_coding processed_transcript MGP_129S1SvImJ_T0029131.1 MGP_129S1SvImJ_G0018314.1 mouse_genomes_project 11 53817609 53833318 + MGP_129S1SvImJ_P0029131 Acsl6 protein_coding protein_coding MGP_129S1SvImJ_T0031371.1 MGP_129S1SvImJ_G0018874.1 mouse_genomes_project 11 86330655 86334536 - MGP_129S1SvImJ_P0031371 Pigw protein_coding protein_coding MGP_129S1SvImJ_T0031372.1 MGP_129S1SvImJ_G0018874.1 mouse_genomes_project 11 86331183 86334626 - MGP_129S1SvImJ_P0031372 Pigw protein_coding protein_coding MGP_129S1SvImJ_T0031353.1 MGP_129S1SvImJ_G0018871.1 mouse_genomes_project 11 86262268 86268689 - MGP_129S1SvImJ_P0031353 Mrm1 protein_coding protein_coding MGP_129S1SvImJ_T0031354.1 MGP_129S1SvImJ_G0018871.1 mouse_genomes_project 11 86263916 86264564 - Mrm1 protein_coding retained_intron MGP_129S1SvImJ_T0031355.1 MGP_129S1SvImJ_G0018871.1 mouse_genomes_project 11 86264176 86267908 - Mrm1 protein_coding processed_transcript MGP_129S1SvImJ_T0099290.1 MGP_129S1SvImJ_G0037357.1 mouse_genomes_project 11 108289477 108289582 + Gm25362 snRNA snRNA MGP_129S1SvImJ_T0006296.1 MGP_129S1SvImJ_G0005260.1 mouse_genomes_project 11 77449835 77457559 + Gm26780 lincRNA lincRNA MGP_129S1SvImJ_T0027851.1 MGP_129S1SvImJ_G0017992.1 mouse_genomes_project 11 1948241 1957390 - MGP_129S1SvImJ_P0027851 Nefh protein_coding protein_coding MGP_129S1SvImJ_T0033724.1 MGP_129S1SvImJ_G0019435.1 mouse_genomes_project 11 120798985 120814768 + MGP_129S1SvImJ_P0033724 protein_coding protein_coding MGP_129S1SvImJ_T0033725.1 MGP_129S1SvImJ_G0019435.1 mouse_genomes_project 11 120798985 120814473 + MGP_129S1SvImJ_P0033725 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033726.1 MGP_129S1SvImJ_G0019435.1 mouse_genomes_project 11 120799306 120814770 + MGP_129S1SvImJ_P0033726 protein_coding protein_coding MGP_129S1SvImJ_T0033727.1 MGP_129S1SvImJ_G0019435.1 mouse_genomes_project 11 120802506 120814768 + MGP_129S1SvImJ_P0033727 protein_coding protein_coding MGP_129S1SvImJ_T0033728.1 MGP_129S1SvImJ_G0019435.1 mouse_genomes_project 11 120802554 120805515 + protein_coding retained_intron MGP_129S1SvImJ_T0012798.1 MGP_129S1SvImJ_G0010887.1 mouse_genomes_project 11 124065567 124066012 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017278.1 MGP_129S1SvImJ_G0015201.1 mouse_genomes_project 11 99429657 99432399 - Gm11574 processed_transcript processed_transcript MGP_129S1SvImJ_T0032466.1 MGP_129S1SvImJ_G0019179.1 mouse_genomes_project 11 103898098 103903029 + MGP_129S1SvImJ_P0032466 Mlx protein_coding protein_coding MGP_129S1SvImJ_T0032467.1 MGP_129S1SvImJ_G0019179.1 mouse_genomes_project 11 103898098 103903029 + MGP_129S1SvImJ_P0032467 Mlx protein_coding protein_coding MGP_129S1SvImJ_T0032468.1 MGP_129S1SvImJ_G0019179.1 mouse_genomes_project 11 103898111 103901948 + Mlx protein_coding processed_transcript MGP_129S1SvImJ_T0032469.1 MGP_129S1SvImJ_G0019179.1 mouse_genomes_project 11 103898111 103901968 + Mlx protein_coding processed_transcript MGP_129S1SvImJ_T0032470.1 MGP_129S1SvImJ_G0019179.1 mouse_genomes_project 11 103898121 103903029 + MGP_129S1SvImJ_P0032470 Mlx protein_coding protein_coding MGP_129S1SvImJ_T0032471.1 MGP_129S1SvImJ_G0019179.1 mouse_genomes_project 11 103898125 103899787 + MGP_129S1SvImJ_P0032471 Mlx protein_coding protein_coding MGP_129S1SvImJ_T0032472.1 MGP_129S1SvImJ_G0019179.1 mouse_genomes_project 11 103900483 103902340 + Mlx protein_coding processed_transcript MGP_129S1SvImJ_T0029661.1 MGP_129S1SvImJ_G0018457.1 mouse_genomes_project 11 62622211 62647918 + Trpv2 protein_coding processed_transcript MGP_129S1SvImJ_T0029662.1 MGP_129S1SvImJ_G0018457.1 mouse_genomes_project 11 62622263 62648921 + MGP_129S1SvImJ_P0029662 Trpv2 protein_coding protein_coding MGP_129S1SvImJ_T0029663.1 MGP_129S1SvImJ_G0018457.1 mouse_genomes_project 11 62623272 62629002 + Trpv2 protein_coding processed_transcript MGP_129S1SvImJ_T0029664.1 MGP_129S1SvImJ_G0018457.1 mouse_genomes_project 11 62623850 62647918 + MGP_129S1SvImJ_P0029664 Trpv2 protein_coding protein_coding MGP_129S1SvImJ_T0029665.1 MGP_129S1SvImJ_G0018457.1 mouse_genomes_project 11 62628964 62647918 + Trpv2 protein_coding processed_transcript MGP_129S1SvImJ_T0009707.1 MGP_129S1SvImJ_G0007823.1 mouse_genomes_project 11 69950503 69950581 - Gm27493 miRNA miRNA MGP_129S1SvImJ_T0032328.1 MGP_129S1SvImJ_G0019149.1 mouse_genomes_project 11 103079661 103081977 + MGP_129S1SvImJ_P0032328 Eif1 protein_coding protein_coding MGP_129S1SvImJ_T0032329.1 MGP_129S1SvImJ_G0019149.1 mouse_genomes_project 11 103079985 103080928 + MGP_129S1SvImJ_P0032329 Eif1 protein_coding protein_coding MGP_129S1SvImJ_T0032330.1 MGP_129S1SvImJ_G0019149.1 mouse_genomes_project 11 103080294 103081284 + Eif1 protein_coding processed_transcript MGP_129S1SvImJ_T0032331.1 MGP_129S1SvImJ_G0019149.1 mouse_genomes_project 11 103080599 103081630 + MGP_129S1SvImJ_P0032331 Eif1 protein_coding protein_coding MGP_129S1SvImJ_T0032332.1 MGP_129S1SvImJ_G0019149.1 mouse_genomes_project 11 103080822 103081414 + Eif1 protein_coding processed_transcript MGP_129S1SvImJ_T0029496.1 MGP_129S1SvImJ_G0018428.1 mouse_genomes_project 11 60790850 60805318 - MGP_129S1SvImJ_P0029496 Tmem11 protein_coding protein_coding MGP_129S1SvImJ_T0029497.1 MGP_129S1SvImJ_G0018428.1 mouse_genomes_project 11 60790850 60805552 - MGP_129S1SvImJ_P0029497 Tmem11 protein_coding protein_coding MGP_129S1SvImJ_T0029498.1 MGP_129S1SvImJ_G0018428.1 mouse_genomes_project 11 60791388 60805067 - MGP_129S1SvImJ_P0029498 Tmem11 protein_coding protein_coding MGP_129S1SvImJ_T0030254.1 MGP_129S1SvImJ_G0018591.1 mouse_genomes_project 11 70844754 70851781 - MGP_129S1SvImJ_P0030254 Alox12e protein_coding protein_coding MGP_129S1SvImJ_T0030255.1 MGP_129S1SvImJ_G0018591.1 mouse_genomes_project 11 70849123 70850730 - Alox12e protein_coding retained_intron MGP_129S1SvImJ_T0030256.1 MGP_129S1SvImJ_G0018591.1 mouse_genomes_project 11 70850146 70851007 - Alox12e protein_coding retained_intron MGP_129S1SvImJ_T0030257.1 MGP_129S1SvImJ_G0018591.1 mouse_genomes_project 11 70850207 70851601 - Alox12e protein_coding retained_intron MGP_129S1SvImJ_T0031901.1 MGP_129S1SvImJ_G0019006.1 mouse_genomes_project 11 98631427 98634798 + MGP_129S1SvImJ_P0031901 Hoxb4 protein_coding protein_coding MGP_129S1SvImJ_T0012792.1 MGP_129S1SvImJ_G0010881.1 mouse_genomes_project 11 120493990 120494447 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029198.1 MGP_129S1SvImJ_G0018332.1 mouse_genomes_project 11 55005735 55043190 + MGP_129S1SvImJ_P0029198 G3bp1 protein_coding protein_coding MGP_129S1SvImJ_T0029199.1 MGP_129S1SvImJ_G0018332.1 mouse_genomes_project 11 55005768 55025570 + G3bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0029200.1 MGP_129S1SvImJ_G0018332.1 mouse_genomes_project 11 55005786 55043198 + MGP_129S1SvImJ_P0029200 G3bp1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0028743.1 MGP_129S1SvImJ_G0018211.1 mouse_genomes_project 11 47989964 48100783 - MGP_129S1SvImJ_P0028743 protein_coding protein_coding MGP_129S1SvImJ_T0029681.1 MGP_129S1SvImJ_G0018462.1 mouse_genomes_project 11 62822841 62862265 - Zfp286 protein_coding processed_transcript MGP_129S1SvImJ_T0029682.1 MGP_129S1SvImJ_G0018462.1 mouse_genomes_project 11 62852975 62862810 - MGP_129S1SvImJ_P0029682 Zfp286 protein_coding protein_coding MGP_129S1SvImJ_T0029683.1 MGP_129S1SvImJ_G0018462.1 mouse_genomes_project 11 62854019 62862702 - Zfp286 protein_coding processed_transcript MGP_129S1SvImJ_T0029684.1 MGP_129S1SvImJ_G0018462.1 mouse_genomes_project 11 62854028 62857437 - Zfp286 protein_coding processed_transcript MGP_129S1SvImJ_T0029685.1 MGP_129S1SvImJ_G0018462.1 mouse_genomes_project 11 62856801 62862694 - Zfp286 protein_coding processed_transcript MGP_129S1SvImJ_T0029686.1 MGP_129S1SvImJ_G0018462.1 mouse_genomes_project 11 62856801 62862671 - Zfp286 protein_coding processed_transcript MGP_129S1SvImJ_T0029687.1 MGP_129S1SvImJ_G0018462.1 mouse_genomes_project 11 62860859 62862708 - Zfp286 protein_coding processed_transcript MGP_129S1SvImJ_T0029243.1 MGP_129S1SvImJ_G0018348.1 mouse_genomes_project 11 57995087 58002663 + MGP_129S1SvImJ_P0029243 Zfp692 protein_coding protein_coding MGP_129S1SvImJ_T0029244.1 MGP_129S1SvImJ_G0018348.1 mouse_genomes_project 11 57995190 58002677 + MGP_129S1SvImJ_P0029244 Zfp692 protein_coding protein_coding MGP_129S1SvImJ_T0003179.1 MGP_129S1SvImJ_G0002953.1 mouse_genomes_project 11 51539450 51542343 + Gm12207 antisense antisense MGP_129S1SvImJ_T0030994.1 MGP_129S1SvImJ_G0018769.1 mouse_genomes_project 11 79174995 79190212 + MGP_129S1SvImJ_P0030994 Proca1 protein_coding protein_coding MGP_129S1SvImJ_T0030995.1 MGP_129S1SvImJ_G0018769.1 mouse_genomes_project 11 79176307 79190175 + MGP_129S1SvImJ_P0030995 Proca1 protein_coding protein_coding MGP_129S1SvImJ_T0030996.1 MGP_129S1SvImJ_G0018769.1 mouse_genomes_project 11 79176337 79190471 + MGP_129S1SvImJ_P0030996 Proca1 protein_coding protein_coding MGP_129S1SvImJ_T0030997.1 MGP_129S1SvImJ_G0018769.1 mouse_genomes_project 11 79189134 79189799 + Proca1 protein_coding processed_transcript MGP_129S1SvImJ_T0034217.1 MGP_129S1SvImJ_G0019531.1 mouse_genomes_project 11 125312963 125331665 - MGP_129S1SvImJ_P0034217 Fasn protein_coding protein_coding MGP_129S1SvImJ_T0034218.1 MGP_129S1SvImJ_G0019531.1 mouse_genomes_project 11 125314222 125331213 - MGP_129S1SvImJ_P0034218 Fasn protein_coding protein_coding MGP_129S1SvImJ_T0034219.1 MGP_129S1SvImJ_G0019531.1 mouse_genomes_project 11 125314664 125315723 - Fasn protein_coding retained_intron MGP_129S1SvImJ_T0034220.1 MGP_129S1SvImJ_G0019531.1 mouse_genomes_project 11 125315681 125316819 - Fasn protein_coding retained_intron MGP_129S1SvImJ_T0034221.1 MGP_129S1SvImJ_G0019531.1 mouse_genomes_project 11 125321612 125322573 - Fasn protein_coding retained_intron MGP_129S1SvImJ_T0034222.1 MGP_129S1SvImJ_G0019531.1 mouse_genomes_project 11 125329889 125330898 - MGP_129S1SvImJ_P0034222 Fasn protein_coding protein_coding MGP_129S1SvImJ_T0033312.1 MGP_129S1SvImJ_G0019355.1 mouse_genomes_project 11 117619443 117919307 - MGP_129S1SvImJ_P0033312 Sdk2 protein_coding protein_coding MGP_129S1SvImJ_T0033313.1 MGP_129S1SvImJ_G0019355.1 mouse_genomes_project 11 117619444 117918967 - MGP_129S1SvImJ_P0033313 Sdk2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0033314.1 MGP_129S1SvImJ_G0019355.1 mouse_genomes_project 11 117636424 117652722 - Sdk2 protein_coding processed_transcript MGP_129S1SvImJ_T0033315.1 MGP_129S1SvImJ_G0019355.1 mouse_genomes_project 11 117648712 117669970 - Sdk2 protein_coding processed_transcript MGP_129S1SvImJ_T0033316.1 MGP_129S1SvImJ_G0019355.1 mouse_genomes_project 11 117693457 117919064 - MGP_129S1SvImJ_P0033316 Sdk2 protein_coding protein_coding MGP_129S1SvImJ_T0033317.1 MGP_129S1SvImJ_G0019355.1 mouse_genomes_project 11 117712830 117920135 - Sdk2 protein_coding processed_transcript MGP_129S1SvImJ_T0033318.1 MGP_129S1SvImJ_G0019355.1 mouse_genomes_project 11 117786433 117920118 - Sdk2 protein_coding processed_transcript MGP_129S1SvImJ_T0099224.1 MGP_129S1SvImJ_G0037291.1 mouse_genomes_project 11 14110064 14110171 - Gm25698 snRNA snRNA MGP_129S1SvImJ_T0029765.1 MGP_129S1SvImJ_G0018485.1 mouse_genomes_project 11 67357582 67382980 + MGP_129S1SvImJ_P0029765 Myh3 protein_coding protein_coding MGP_129S1SvImJ_T0029766.1 MGP_129S1SvImJ_G0018485.1 mouse_genomes_project 11 67357582 67382980 + MGP_129S1SvImJ_P0029766 Myh3 protein_coding protein_coding MGP_129S1SvImJ_T0029767.1 MGP_129S1SvImJ_G0018485.1 mouse_genomes_project 11 67357582 67382975 + MGP_129S1SvImJ_P0029767 Myh3 protein_coding protein_coding MGP_129S1SvImJ_T0006397.1 MGP_129S1SvImJ_G0005332.1 mouse_genomes_project 11 124365785 124369349 + Gm11766 lincRNA lincRNA MGP_129S1SvImJ_T0031195.1 MGP_129S1SvImJ_G0018821.1 mouse_genomes_project 11 83279600 83281489 + MGP_129S1SvImJ_P0031195 Ccl2 protein_coding protein_coding MGP_129S1SvImJ_T0031196.1 MGP_129S1SvImJ_G0018821.1 mouse_genomes_project 11 83279639 83281486 + Ccl2 protein_coding retained_intron MGP_129S1SvImJ_T0027983.1 MGP_129S1SvImJ_G0018021.1 mouse_genomes_project 11 3501610 3519714 + MGP_129S1SvImJ_P0027983 Zmiz2 protein_coding protein_coding MGP_129S1SvImJ_T0027984.1 MGP_129S1SvImJ_G0018021.1 mouse_genomes_project 11 3501900 3519714 + MGP_129S1SvImJ_P0027984 Zmiz2 protein_coding protein_coding MGP_129S1SvImJ_T0027985.1 MGP_129S1SvImJ_G0018021.1 mouse_genomes_project 11 3502007 3519714 + MGP_129S1SvImJ_P0027985 Zmiz2 protein_coding protein_coding MGP_129S1SvImJ_T0027986.1 MGP_129S1SvImJ_G0018021.1 mouse_genomes_project 11 3508743 3519630 + MGP_129S1SvImJ_P0027986 Zmiz2 protein_coding protein_coding MGP_129S1SvImJ_T0027987.1 MGP_129S1SvImJ_G0018021.1 mouse_genomes_project 11 3509160 3519486 + MGP_129S1SvImJ_P0027987 Zmiz2 protein_coding protein_coding MGP_129S1SvImJ_T0027988.1 MGP_129S1SvImJ_G0018021.1 mouse_genomes_project 11 3510284 3511404 + Zmiz2 protein_coding retained_intron MGP_129S1SvImJ_T0033152.1 MGP_129S1SvImJ_G0019319.1 mouse_genomes_project 11 110586671 110870732 - MGP_129S1SvImJ_P0033152 Pitpnc1 protein_coding protein_coding MGP_129S1SvImJ_T0033153.1 MGP_129S1SvImJ_G0019319.1 mouse_genomes_project 11 110586671 110726144 - MGP_129S1SvImJ_P0033153 Pitpnc1 protein_coding protein_coding MGP_129S1SvImJ_T0033154.1 MGP_129S1SvImJ_G0019319.1 mouse_genomes_project 11 110604926 110736631 - MGP_129S1SvImJ_P0033154 Pitpnc1 protein_coding protein_coding MGP_129S1SvImJ_T0033155.1 MGP_129S1SvImJ_G0019319.1 mouse_genomes_project 11 110709168 110726033 - Pitpnc1 protein_coding processed_transcript MGP_129S1SvImJ_T0012794.1 MGP_129S1SvImJ_G0010883.1 mouse_genomes_project 11 120685081 120685315 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0030595.1 MGP_129S1SvImJ_G0018675.1 mouse_genomes_project 11 74510630 74513393 - MGP_129S1SvImJ_P0030595 Olfr392 protein_coding protein_coding MGP_129S1SvImJ_T0030596.1 MGP_129S1SvImJ_G0018675.1 mouse_genomes_project 11 74511244 74513390 - MGP_129S1SvImJ_P0030596 Olfr392 protein_coding protein_coding MGP_129S1SvImJ_T0033753.1 MGP_129S1SvImJ_G0019441.1 mouse_genomes_project 11 121006124 121012604 + MGP_129S1SvImJ_P0033753 Mettl23 protein_coding protein_coding MGP_129S1SvImJ_T0033754.1 MGP_129S1SvImJ_G0019441.1 mouse_genomes_project 11 121006401 121013215 + Mettl23 protein_coding retained_intron MGP_129S1SvImJ_T0033755.1 MGP_129S1SvImJ_G0019441.1 mouse_genomes_project 11 121006407 121008986 + Mettl23 protein_coding retained_intron MGP_129S1SvImJ_T0033756.1 MGP_129S1SvImJ_G0019441.1 mouse_genomes_project 11 121006426 121012419 + MGP_129S1SvImJ_P0033756 Mettl23 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0033757.1 MGP_129S1SvImJ_G0019441.1 mouse_genomes_project 11 121006431 121008908 + Mettl23 protein_coding retained_intron MGP_129S1SvImJ_T0033758.1 MGP_129S1SvImJ_G0019441.1 mouse_genomes_project 11 121006519 121012493 + Mettl23 protein_coding retained_intron MGP_129S1SvImJ_T0033759.1 MGP_129S1SvImJ_G0019441.1 mouse_genomes_project 11 121006521 121011917 + MGP_129S1SvImJ_P0033759 Mettl23 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033760.1 MGP_129S1SvImJ_G0019441.1 mouse_genomes_project 11 121006521 121011220 + MGP_129S1SvImJ_P0033760 Mettl23 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033761.1 MGP_129S1SvImJ_G0019441.1 mouse_genomes_project 11 121011764 121017114 + MGP_129S1SvImJ_P0033761 Mettl23 protein_coding protein_coding MGP_129S1SvImJ_T0030858.1 MGP_129S1SvImJ_G0018744.1 mouse_genomes_project 11 77960413 78067037 - MGP_129S1SvImJ_P0030858 Efcab5 protein_coding protein_coding MGP_129S1SvImJ_T0030859.1 MGP_129S1SvImJ_G0018744.1 mouse_genomes_project 11 77960442 77973581 - Efcab5 protein_coding retained_intron MGP_129S1SvImJ_T0030860.1 MGP_129S1SvImJ_G0018744.1 mouse_genomes_project 11 77960683 78028998 - MGP_129S1SvImJ_P0030860 Efcab5 protein_coding protein_coding MGP_129S1SvImJ_T0030861.1 MGP_129S1SvImJ_G0018744.1 mouse_genomes_project 11 77960796 78096404 - MGP_129S1SvImJ_P0030861 Efcab5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0030862.1 MGP_129S1SvImJ_G0018744.1 mouse_genomes_project 11 77973238 78010788 - Efcab5 protein_coding retained_intron MGP_129S1SvImJ_T0030759.1 MGP_129S1SvImJ_G0018721.1 mouse_genomes_project 11 76447686 76474435 + MGP_129S1SvImJ_P0030759 Crk protein_coding protein_coding MGP_129S1SvImJ_T0030760.1 MGP_129S1SvImJ_G0018721.1 mouse_genomes_project 11 76447711 76472026 + MGP_129S1SvImJ_P0030760 Crk protein_coding protein_coding MGP_129S1SvImJ_T0030761.1 MGP_129S1SvImJ_G0018721.1 mouse_genomes_project 11 76447711 76475278 + MGP_129S1SvImJ_P0030761 Crk protein_coding protein_coding MGP_129S1SvImJ_T0030762.1 MGP_129S1SvImJ_G0018721.1 mouse_genomes_project 11 76447738 76469160 + MGP_129S1SvImJ_P0030762 Crk protein_coding protein_coding MGP_129S1SvImJ_T0030763.1 MGP_129S1SvImJ_G0018721.1 mouse_genomes_project 11 76447969 76469108 + MGP_129S1SvImJ_P0030763 Crk protein_coding protein_coding MGP_129S1SvImJ_T0012665.1 MGP_129S1SvImJ_G0010754.1 mouse_genomes_project 11 69480305 69480476 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003382.1 MGP_129S1SvImJ_G0003117.1 mouse_genomes_project 11 124996036 124999702 - Gm11789 antisense antisense MGP_129S1SvImJ_T0003383.1 MGP_129S1SvImJ_G0003117.1 mouse_genomes_project 11 124996062 125000636 - Gm11789 antisense antisense MGP_129S1SvImJ_T0003384.1 MGP_129S1SvImJ_G0003117.1 mouse_genomes_project 11 124996088 125000932 - Gm11789 antisense antisense MGP_129S1SvImJ_T0003385.1 MGP_129S1SvImJ_G0003117.1 mouse_genomes_project 11 124997411 125000661 - Gm11789 antisense antisense MGP_129S1SvImJ_T0003386.1 MGP_129S1SvImJ_G0003117.1 mouse_genomes_project 11 124999356 125000645 - Gm11789 antisense antisense MGP_129S1SvImJ_T0030614.1 MGP_129S1SvImJ_G0018686.1 mouse_genomes_project 11 74839462 74844138 + MGP_129S1SvImJ_P0030614 Olfr402 protein_coding protein_coding MGP_129S1SvImJ_T0028590.1 MGP_129S1SvImJ_G0018166.1 mouse_genomes_project 11 40812347 40868958 - MGP_129S1SvImJ_P0028590 Gabra1 protein_coding protein_coding MGP_129S1SvImJ_T0028591.1 MGP_129S1SvImJ_G0018166.1 mouse_genomes_project 11 40812347 40868191 - MGP_129S1SvImJ_P0028591 Gabra1 protein_coding protein_coding MGP_129S1SvImJ_T0028592.1 MGP_129S1SvImJ_G0018166.1 mouse_genomes_project 11 40816894 40864866 - MGP_129S1SvImJ_P0028592 Gabra1 protein_coding protein_coding MGP_129S1SvImJ_T0028593.1 MGP_129S1SvImJ_G0018166.1 mouse_genomes_project 11 40837532 40864979 - MGP_129S1SvImJ_P0028593 Gabra1 protein_coding protein_coding MGP_129S1SvImJ_T0028594.1 MGP_129S1SvImJ_G0018166.1 mouse_genomes_project 11 40861006 40868958 - MGP_129S1SvImJ_P0028594 Gabra1 protein_coding protein_coding MGP_129S1SvImJ_T0028595.1 MGP_129S1SvImJ_G0018166.1 mouse_genomes_project 11 40862312 40868488 - Gabra1 protein_coding processed_transcript MGP_129S1SvImJ_T0028596.1 MGP_129S1SvImJ_G0018166.1 mouse_genomes_project 11 40864582 40868938 - MGP_129S1SvImJ_P0028596 Gabra1 protein_coding protein_coding MGP_129S1SvImJ_T0100486.1 MGP_129S1SvImJ_G0038553.1 mouse_genomes_project 11 20911309 20911418 - Gm24398 snoRNA snoRNA MGP_129S1SvImJ_T0029771.1 MGP_129S1SvImJ_G0018487.1 mouse_genomes_project 11 67489371 67515202 + MGP_129S1SvImJ_P0029771 protein_coding protein_coding MGP_129S1SvImJ_T0029772.1 MGP_129S1SvImJ_G0018487.1 mouse_genomes_project 11 67489430 67515122 + MGP_129S1SvImJ_P0029772 protein_coding protein_coding MGP_129S1SvImJ_T0029773.1 MGP_129S1SvImJ_G0018487.1 mouse_genomes_project 11 67489457 67491575 + MGP_129S1SvImJ_P0029773 protein_coding protein_coding MGP_129S1SvImJ_T0029774.1 MGP_129S1SvImJ_G0018487.1 mouse_genomes_project 11 67489725 67515200 + MGP_129S1SvImJ_P0029774 protein_coding protein_coding MGP_129S1SvImJ_T0030076.1 MGP_129S1SvImJ_G0018559.1 mouse_genomes_project 11 70306314 70320975 - MGP_129S1SvImJ_P0030076 Nlgn2 protein_coding protein_coding MGP_129S1SvImJ_T0030077.1 MGP_129S1SvImJ_G0018559.1 mouse_genomes_project 11 70306314 70318043 - MGP_129S1SvImJ_P0030077 Nlgn2 protein_coding protein_coding MGP_129S1SvImJ_T0030078.1 MGP_129S1SvImJ_G0018559.1 mouse_genomes_project 11 70310929 70317453 - MGP_129S1SvImJ_P0030078 Nlgn2 protein_coding protein_coding MGP_129S1SvImJ_T0030079.1 MGP_129S1SvImJ_G0018559.1 mouse_genomes_project 11 70311234 70311750 - Nlgn2 protein_coding retained_intron MGP_129S1SvImJ_T0003316.1 MGP_129S1SvImJ_G0003061.1 mouse_genomes_project 11 104107895 104109431 - Gm11615 antisense antisense MGP_129S1SvImJ_T0012653.1 MGP_129S1SvImJ_G0010742.1 mouse_genomes_project 11 61972300 61972685 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031202.1 MGP_129S1SvImJ_G0018826.1 mouse_genomes_project 11 83420084 83558280 - Ccl1 protein_coding processed_transcript MGP_129S1SvImJ_T0031203.1 MGP_129S1SvImJ_G0018826.1 mouse_genomes_project 11 83420084 83423236 - MGP_129S1SvImJ_P0031203 Ccl1 protein_coding protein_coding MGP_129S1SvImJ_T0031204.1 MGP_129S1SvImJ_G0018826.1 mouse_genomes_project 11 83420086 83423236 - MGP_129S1SvImJ_P0031204 Ccl1 protein_coding protein_coding MGP_129S1SvImJ_T0029311.1 MGP_129S1SvImJ_G0018384.1 mouse_genomes_project 11 58736471 58738618 + MGP_129S1SvImJ_P0029311 Hist3h2a protein_coding protein_coding MGP_129S1SvImJ_T0032951.1 MGP_129S1SvImJ_G0019275.1 mouse_genomes_project 11 107480877 107598275 - MGP_129S1SvImJ_P0032951 Kansl1 protein_coding protein_coding MGP_129S1SvImJ_T0032952.1 MGP_129S1SvImJ_G0019275.1 mouse_genomes_project 11 107481149 107598275 - MGP_129S1SvImJ_P0032952 Kansl1 protein_coding protein_coding MGP_129S1SvImJ_T0032953.1 MGP_129S1SvImJ_G0019275.1 mouse_genomes_project 11 107481149 107629001 - MGP_129S1SvImJ_P0032953 Kansl1 protein_coding protein_coding MGP_129S1SvImJ_T0032954.1 MGP_129S1SvImJ_G0019275.1 mouse_genomes_project 11 107481193 107597682 - MGP_129S1SvImJ_P0032954 Kansl1 protein_coding protein_coding MGP_129S1SvImJ_T0032955.1 MGP_129S1SvImJ_G0019275.1 mouse_genomes_project 11 107482569 107489214 - Kansl1 protein_coding processed_transcript MGP_129S1SvImJ_T0032956.1 MGP_129S1SvImJ_G0019275.1 mouse_genomes_project 11 107582199 107628131 - MGP_129S1SvImJ_P0032956 Kansl1 protein_coding protein_coding MGP_129S1SvImJ_T0012691.1 MGP_129S1SvImJ_G0010780.1 mouse_genomes_project 11 77978370 77978699 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009729.1 MGP_129S1SvImJ_G0007845.1 mouse_genomes_project 11 79041685 79041751 + Mir144 miRNA miRNA MGP_129S1SvImJ_T0032135.1 MGP_129S1SvImJ_G0019059.1 mouse_genomes_project 11 100959306 100986296 + MGP_129S1SvImJ_P0032135 Erbb2 protein_coding protein_coding MGP_129S1SvImJ_T0032136.1 MGP_129S1SvImJ_G0019059.1 mouse_genomes_project 11 100959329 100985656 + Erbb2 protein_coding processed_transcript MGP_129S1SvImJ_T0032137.1 MGP_129S1SvImJ_G0019059.1 mouse_genomes_project 11 100975738 100976231 + Erbb2 protein_coding processed_transcript MGP_129S1SvImJ_T0029348.1 MGP_129S1SvImJ_G0018396.1 mouse_genomes_project 11 59205431 59208422 - MGP_129S1SvImJ_P0029348 Prss38 protein_coding protein_coding MGP_129S1SvImJ_T0028149.1 MGP_129S1SvImJ_G0018061.1 mouse_genomes_project 11 16298488 16440994 - MGP_129S1SvImJ_P0028149 Meis1 protein_coding protein_coding MGP_129S1SvImJ_T0028150.1 MGP_129S1SvImJ_G0018061.1 mouse_genomes_project 11 16299100 16440978 - MGP_129S1SvImJ_P0028150 Meis1 protein_coding protein_coding MGP_129S1SvImJ_T0028151.1 MGP_129S1SvImJ_G0018061.1 mouse_genomes_project 11 16299100 16440723 - MGP_129S1SvImJ_P0028151 Meis1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028152.1 MGP_129S1SvImJ_G0018061.1 mouse_genomes_project 11 16299339 16434009 - Meis1 protein_coding processed_transcript MGP_129S1SvImJ_T0028153.1 MGP_129S1SvImJ_G0018061.1 mouse_genomes_project 11 16299340 16440241 - MGP_129S1SvImJ_P0028153 Meis1 protein_coding protein_coding MGP_129S1SvImJ_T0028154.1 MGP_129S1SvImJ_G0018061.1 mouse_genomes_project 11 16300013 16438298 - MGP_129S1SvImJ_P0028154 Meis1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028155.1 MGP_129S1SvImJ_G0018061.1 mouse_genomes_project 11 16408819 16440931 - Meis1 protein_coding retained_intron MGP_129S1SvImJ_T0028156.1 MGP_129S1SvImJ_G0018061.1 mouse_genomes_project 11 16431790 16440931 - Meis1 protein_coding retained_intron MGP_129S1SvImJ_T0033494.1 MGP_129S1SvImJ_G0019395.1 mouse_genomes_project 11 119646802 119650918 + MGP_129S1SvImJ_P0033494 Mrps7 protein_coding protein_coding MGP_129S1SvImJ_T0033495.1 MGP_129S1SvImJ_G0019395.1 mouse_genomes_project 11 119647744 119649878 + Mrps7 protein_coding processed_transcript MGP_129S1SvImJ_T0003146.1 MGP_129S1SvImJ_G0002924.1 mouse_genomes_project 11 15384031 15394478 + antisense antisense MGP_129S1SvImJ_T0003147.1 MGP_129S1SvImJ_G0002924.1 mouse_genomes_project 11 15384065 15385213 + antisense antisense MGP_129S1SvImJ_T0003356.1 MGP_129S1SvImJ_G0003096.1 mouse_genomes_project 11 113525989 113527809 + Gm11697 antisense antisense MGP_129S1SvImJ_T0032208.1 MGP_129S1SvImJ_G0019076.1 mouse_genomes_project 11 101482133 101513118 + MGP_129S1SvImJ_P0032208 Wipf2 protein_coding protein_coding MGP_129S1SvImJ_T0032209.1 MGP_129S1SvImJ_G0019076.1 mouse_genomes_project 11 101482133 101529088 + MGP_129S1SvImJ_P0032209 Wipf2 protein_coding protein_coding MGP_129S1SvImJ_T0032210.1 MGP_129S1SvImJ_G0019076.1 mouse_genomes_project 11 101482583 101513659 + Wipf2 protein_coding retained_intron MGP_129S1SvImJ_T0032211.1 MGP_129S1SvImJ_G0019076.1 mouse_genomes_project 11 101511991 101512916 + Wipf2 protein_coding retained_intron MGP_129S1SvImJ_T0100538.1 MGP_129S1SvImJ_G0038605.1 mouse_genomes_project 11 109800651 109800721 + Snord104 snoRNA snoRNA MGP_129S1SvImJ_T0032292.1 MGP_129S1SvImJ_G0019122.1 mouse_genomes_project 11 102547178 102548443 - MGP_129S1SvImJ_P0032292 2300003K06Rik protein_coding protein_coding MGP_129S1SvImJ_T0034056.1 MGP_129S1SvImJ_G0019500.1 mouse_genomes_project 11 124913981 124919605 - Pde6g protein_coding processed_transcript MGP_129S1SvImJ_T0034057.1 MGP_129S1SvImJ_G0019500.1 mouse_genomes_project 11 124914000 124919623 - Pde6g protein_coding processed_transcript MGP_129S1SvImJ_T0034058.1 MGP_129S1SvImJ_G0019500.1 mouse_genomes_project 11 124914002 124919671 - MGP_129S1SvImJ_P0034058 Pde6g protein_coding protein_coding MGP_129S1SvImJ_T0033695.1 MGP_129S1SvImJ_G0019430.1 mouse_genomes_project 11 120665619 120671348 + MGP_129S1SvImJ_P0033695 Sphk1 protein_coding protein_coding MGP_129S1SvImJ_T0033696.1 MGP_129S1SvImJ_G0019430.1 mouse_genomes_project 11 120665815 120670391 + MGP_129S1SvImJ_P0033696 Sphk1 protein_coding protein_coding MGP_129S1SvImJ_T0033697.1 MGP_129S1SvImJ_G0019430.1 mouse_genomes_project 11 120665856 120669975 + Sphk1 protein_coding retained_intron MGP_129S1SvImJ_T0033698.1 MGP_129S1SvImJ_G0019430.1 mouse_genomes_project 11 120666434 120671348 + MGP_129S1SvImJ_P0033698 Sphk1 protein_coding protein_coding MGP_129S1SvImJ_T0033699.1 MGP_129S1SvImJ_G0019430.1 mouse_genomes_project 11 120666601 120671361 + MGP_129S1SvImJ_P0033699 Sphk1 protein_coding protein_coding MGP_129S1SvImJ_T0033700.1 MGP_129S1SvImJ_G0019430.1 mouse_genomes_project 11 120667134 120671365 + MGP_129S1SvImJ_P0033700 Sphk1 protein_coding protein_coding MGP_129S1SvImJ_T0033701.1 MGP_129S1SvImJ_G0019430.1 mouse_genomes_project 11 120667141 120671359 + Sphk1 protein_coding retained_intron MGP_129S1SvImJ_T0033702.1 MGP_129S1SvImJ_G0019430.1 mouse_genomes_project 11 120667144 120670403 + MGP_129S1SvImJ_P0033702 Sphk1 protein_coding protein_coding MGP_129S1SvImJ_T0033703.1 MGP_129S1SvImJ_G0019430.1 mouse_genomes_project 11 120667147 120670032 + MGP_129S1SvImJ_P0033703 Sphk1 protein_coding protein_coding MGP_129S1SvImJ_T0033704.1 MGP_129S1SvImJ_G0019430.1 mouse_genomes_project 11 120667163 120671365 + MGP_129S1SvImJ_P0033704 Sphk1 protein_coding protein_coding MGP_129S1SvImJ_T0033705.1 MGP_129S1SvImJ_G0019430.1 mouse_genomes_project 11 120667615 120671348 + MGP_129S1SvImJ_P0033705 Sphk1 protein_coding protein_coding MGP_129S1SvImJ_T0033706.1 MGP_129S1SvImJ_G0019430.1 mouse_genomes_project 11 120667941 120670327 + Sphk1 protein_coding processed_transcript MGP_129S1SvImJ_T0033707.1 MGP_129S1SvImJ_G0019430.1 mouse_genomes_project 11 120667958 120670686 + MGP_129S1SvImJ_P0033707 Sphk1 protein_coding protein_coding MGP_129S1SvImJ_T0033708.1 MGP_129S1SvImJ_G0019430.1 mouse_genomes_project 11 120668265 120670389 + MGP_129S1SvImJ_P0033708 Sphk1 protein_coding protein_coding MGP_129S1SvImJ_T0033709.1 MGP_129S1SvImJ_G0019430.1 mouse_genomes_project 11 120668850 120669979 + Sphk1 protein_coding retained_intron MGP_129S1SvImJ_T0033710.1 MGP_129S1SvImJ_G0019430.1 mouse_genomes_project 11 120669430 120671361 + MGP_129S1SvImJ_P0033710 Sphk1 protein_coding protein_coding MGP_129S1SvImJ_T0030060.1 MGP_129S1SvImJ_G0018553.1 mouse_genomes_project 11 70242736 70258191 + MGP_129S1SvImJ_P0030060 Zbtb4 protein_coding protein_coding MGP_129S1SvImJ_T0030061.1 MGP_129S1SvImJ_G0018553.1 mouse_genomes_project 11 70242736 70262002 + MGP_129S1SvImJ_P0030061 Zbtb4 protein_coding protein_coding MGP_129S1SvImJ_T0030062.1 MGP_129S1SvImJ_G0018553.1 mouse_genomes_project 11 70242808 70259930 + MGP_129S1SvImJ_P0030062 Zbtb4 protein_coding protein_coding MGP_129S1SvImJ_T0030063.1 MGP_129S1SvImJ_G0018553.1 mouse_genomes_project 11 70242830 70256291 + MGP_129S1SvImJ_P0030063 Zbtb4 protein_coding protein_coding MGP_129S1SvImJ_T0030064.1 MGP_129S1SvImJ_G0018553.1 mouse_genomes_project 11 70243263 70254020 + MGP_129S1SvImJ_P0030064 Zbtb4 protein_coding protein_coding MGP_129S1SvImJ_T0030065.1 MGP_129S1SvImJ_G0018553.1 mouse_genomes_project 11 70243358 70254004 + MGP_129S1SvImJ_P0030065 Zbtb4 protein_coding protein_coding MGP_129S1SvImJ_T0030066.1 MGP_129S1SvImJ_G0018553.1 mouse_genomes_project 11 70253387 70257655 + MGP_129S1SvImJ_P0030066 Zbtb4 protein_coding protein_coding MGP_129S1SvImJ_T0012507.1 MGP_129S1SvImJ_G0010596.1 mouse_genomes_project 11 13817969 13819035 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028578.1 MGP_129S1SvImJ_G0018162.1 mouse_genomes_project 11 39400167 39406541 + MGP_129S1SvImJ_P0028578 Nudcd2 protein_coding protein_coding MGP_129S1SvImJ_T0028579.1 MGP_129S1SvImJ_G0018162.1 mouse_genomes_project 11 39400244 39402913 + Nudcd2 protein_coding processed_transcript MGP_129S1SvImJ_T0028580.1 MGP_129S1SvImJ_G0018162.1 mouse_genomes_project 11 39400446 39406045 + MGP_129S1SvImJ_P0028580 Nudcd2 protein_coding protein_coding MGP_129S1SvImJ_T0028581.1 MGP_129S1SvImJ_G0018162.1 mouse_genomes_project 11 39400705 39405978 + Nudcd2 protein_coding processed_transcript MGP_129S1SvImJ_T0028582.1 MGP_129S1SvImJ_G0018162.1 mouse_genomes_project 11 39402806 39405759 + Nudcd2 protein_coding processed_transcript MGP_129S1SvImJ_T0029722.1 MGP_129S1SvImJ_G0018474.1 mouse_genomes_project 11 65189265 65359347 - MGP_129S1SvImJ_P0029722 Arhgap44 protein_coding protein_coding MGP_129S1SvImJ_T0029723.1 MGP_129S1SvImJ_G0018474.1 mouse_genomes_project 11 65189545 65359666 - MGP_129S1SvImJ_P0029723 Arhgap44 protein_coding protein_coding MGP_129S1SvImJ_T0029724.1 MGP_129S1SvImJ_G0018474.1 mouse_genomes_project 11 65189546 65359609 - MGP_129S1SvImJ_P0029724 Arhgap44 protein_coding protein_coding MGP_129S1SvImJ_T0029725.1 MGP_129S1SvImJ_G0018474.1 mouse_genomes_project 11 65241100 65359276 - MGP_129S1SvImJ_P0029725 Arhgap44 protein_coding protein_coding MGP_129S1SvImJ_T0029178.1 MGP_129S1SvImJ_G0018325.1 mouse_genomes_project 11 54609962 54624919 + MGP_129S1SvImJ_P0029178 Gm2a protein_coding protein_coding MGP_129S1SvImJ_T0028046.1 MGP_129S1SvImJ_G0018037.1 mouse_genomes_project 11 6224301 6243050 - MGP_129S1SvImJ_P0028046 Hus1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028047.1 MGP_129S1SvImJ_G0018037.1 mouse_genomes_project 11 6224301 6243081 - MGP_129S1SvImJ_P0028047 Hus1 protein_coding protein_coding MGP_129S1SvImJ_T0028048.1 MGP_129S1SvImJ_G0018037.1 mouse_genomes_project 11 6226520 6243018 - Hus1 protein_coding retained_intron MGP_129S1SvImJ_T0028049.1 MGP_129S1SvImJ_G0018037.1 mouse_genomes_project 11 6228504 6243054 - Hus1 protein_coding retained_intron MGP_129S1SvImJ_T0028050.1 MGP_129S1SvImJ_G0018037.1 mouse_genomes_project 11 6229889 6242568 - Hus1 protein_coding retained_intron MGP_129S1SvImJ_T0028051.1 MGP_129S1SvImJ_G0018037.1 mouse_genomes_project 11 6237860 6243018 - Hus1 protein_coding processed_transcript MGP_129S1SvImJ_T0030697.1 MGP_129S1SvImJ_G0018709.1 mouse_genomes_project 11 76093448 76149436 + MGP_129S1SvImJ_P0030697 Smyd4 protein_coding protein_coding MGP_129S1SvImJ_T0030698.1 MGP_129S1SvImJ_G0018709.1 mouse_genomes_project 11 76093510 76121250 + Smyd4 protein_coding retained_intron MGP_129S1SvImJ_T0030699.1 MGP_129S1SvImJ_G0018709.1 mouse_genomes_project 11 76125684 76128888 + Smyd4 protein_coding processed_transcript MGP_129S1SvImJ_T0030700.1 MGP_129S1SvImJ_G0018709.1 mouse_genomes_project 11 76143337 76144362 + Smyd4 protein_coding processed_transcript MGP_129S1SvImJ_T0031141.1 MGP_129S1SvImJ_G0018807.1 mouse_genomes_project 11 81300895 81325640 + MGP_129S1SvImJ_P0031141 Adap2 protein_coding protein_coding MGP_129S1SvImJ_T0031142.1 MGP_129S1SvImJ_G0018807.1 mouse_genomes_project 11 81300906 81312547 + MGP_129S1SvImJ_P0031142 Adap2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0011335.1 MGP_129S1SvImJ_G0009451.1 mouse_genomes_project 11 108354404 108354500 + Gm24290 misc_RNA misc_RNA MGP_129S1SvImJ_T0098451.1 MGP_129S1SvImJ_G0036536.1 mouse_genomes_project 11 68381603 68381729 + Gm26157 rRNA rRNA MGP_129S1SvImJ_T0030613.1 MGP_129S1SvImJ_G0018685.1 mouse_genomes_project 11 74812161 74813109 + MGP_129S1SvImJ_P0030613 Olfr401 protein_coding protein_coding MGP_129S1SvImJ_T0006238.1 MGP_129S1SvImJ_G0005211.1 mouse_genomes_project 11 39133825 39134785 - 3110004A20Rik lincRNA lincRNA MGP_129S1SvImJ_T0003342.1 MGP_129S1SvImJ_G0003085.1 mouse_genomes_project 11 110726556 110733313 + Gm11716 antisense antisense MGP_129S1SvImJ_T0012756.1 MGP_129S1SvImJ_G0010845.1 mouse_genomes_project 11 105058857 105059182 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017288.1 MGP_129S1SvImJ_G0015210.1 mouse_genomes_project 11 106326737 106329622 - 1700028N14Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0099282.1 MGP_129S1SvImJ_G0037349.1 mouse_genomes_project 11 101490458 101490562 - Gm23640 snRNA snRNA MGP_129S1SvImJ_T0003250.1 MGP_129S1SvImJ_G0003012.1 mouse_genomes_project 11 79270070 79270399 - Gm11192 antisense antisense MGP_129S1SvImJ_T0030449.1 MGP_129S1SvImJ_G0018628.1 mouse_genomes_project 11 72641053 72642304 + MGP_129S1SvImJ_P0030449 Fam64a protein_coding protein_coding MGP_129S1SvImJ_T0030450.1 MGP_129S1SvImJ_G0018628.1 mouse_genomes_project 11 72641476 72646391 + MGP_129S1SvImJ_P0030450 Fam64a protein_coding protein_coding MGP_129S1SvImJ_T0030451.1 MGP_129S1SvImJ_G0018628.1 mouse_genomes_project 11 72641523 72642686 + Fam64a protein_coding processed_transcript MGP_129S1SvImJ_T0030452.1 MGP_129S1SvImJ_G0018628.1 mouse_genomes_project 11 72641545 72645114 + Fam64a protein_coding processed_transcript MGP_129S1SvImJ_T0030453.1 MGP_129S1SvImJ_G0018628.1 mouse_genomes_project 11 72641943 72644060 + MGP_129S1SvImJ_P0030453 Fam64a protein_coding protein_coding MGP_129S1SvImJ_T0003247.1 MGP_129S1SvImJ_G0003009.1 mouse_genomes_project 11 76639613 76640139 + Gm16075 antisense antisense MGP_129S1SvImJ_T0012543.1 MGP_129S1SvImJ_G0010632.1 mouse_genomes_project 11 22356256 22357781 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006188.1 MGP_129S1SvImJ_G0005168.1 mouse_genomes_project 11 1221620 1229470 + Gm11959 lincRNA lincRNA MGP_129S1SvImJ_T0100543.1 MGP_129S1SvImJ_G0038610.1 mouse_genomes_project 11 120820523 120820598 + Snord1b snoRNA snoRNA MGP_129S1SvImJ_T0017248.1 MGP_129S1SvImJ_G0015187.1 mouse_genomes_project 11 76573674 76603867 + Gm12339 processed_transcript antisense MGP_129S1SvImJ_T0017249.1 MGP_129S1SvImJ_G0015187.1 mouse_genomes_project 11 76574126 76603885 + Gm12339 processed_transcript processed_transcript MGP_129S1SvImJ_T0098815.1 MGP_129S1SvImJ_G0036898.1 mouse_genomes_project 11 110885556 110886743 + Gm11722 sense_intronic sense_intronic MGP_129S1SvImJ_T0012643.1 MGP_129S1SvImJ_G0010732.1 mouse_genomes_project 11 59321739 59322044 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031050.1 MGP_129S1SvImJ_G0018782.1 mouse_genomes_project 11 79517548 79519043 + Vtn protein_coding retained_intron MGP_129S1SvImJ_T0031051.1 MGP_129S1SvImJ_G0018782.1 mouse_genomes_project 11 79517577 79520782 + MGP_129S1SvImJ_P0031051 Vtn protein_coding protein_coding MGP_129S1SvImJ_T0031052.1 MGP_129S1SvImJ_G0018782.1 mouse_genomes_project 11 79517629 79518702 + Vtn protein_coding retained_intron MGP_129S1SvImJ_T0031053.1 MGP_129S1SvImJ_G0018782.1 mouse_genomes_project 11 79519063 79520680 + Vtn protein_coding retained_intron MGP_129S1SvImJ_T0029987.1 MGP_129S1SvImJ_G0018536.1 mouse_genomes_project 11 69999858 70005971 - MGP_129S1SvImJ_P0029987 Efnb3 protein_coding protein_coding MGP_129S1SvImJ_T0102133.1 MGP_129S1SvImJ_G0039968.1 mouse_genomes_project 11 57732852 57741859 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0031018.1 MGP_129S1SvImJ_G0018774.1 mouse_genomes_project 11 79294521 79317744 + MGP_129S1SvImJ_P0031018 Spag5 protein_coding protein_coding MGP_129S1SvImJ_T0031019.1 MGP_129S1SvImJ_G0018774.1 mouse_genomes_project 11 79294616 79309369 + Spag5 protein_coding retained_intron MGP_129S1SvImJ_T0031020.1 MGP_129S1SvImJ_G0018774.1 mouse_genomes_project 11 79294647 79309042 + Spag5 protein_coding retained_intron MGP_129S1SvImJ_T0031021.1 MGP_129S1SvImJ_G0018774.1 mouse_genomes_project 11 79307293 79308263 + Spag5 protein_coding retained_intron MGP_129S1SvImJ_T0031022.1 MGP_129S1SvImJ_G0018774.1 mouse_genomes_project 11 79309535 79311328 + Spag5 protein_coding retained_intron MGP_129S1SvImJ_T0031023.1 MGP_129S1SvImJ_G0018774.1 mouse_genomes_project 11 79311186 79315185 + Spag5 protein_coding retained_intron MGP_129S1SvImJ_T0031024.1 MGP_129S1SvImJ_G0018774.1 mouse_genomes_project 11 79313248 79315662 + Spag5 protein_coding processed_transcript MGP_129S1SvImJ_T0031025.1 MGP_129S1SvImJ_G0018774.1 mouse_genomes_project 11 79315212 79316027 + Spag5 protein_coding retained_intron MGP_129S1SvImJ_T0030904.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78712334 78820533 + MGP_129S1SvImJ_P0030904 Myo18a protein_coding protein_coding MGP_129S1SvImJ_T0030905.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78712372 78776313 + MGP_129S1SvImJ_P0030905 Myo18a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0030906.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78712389 78732714 + Myo18a protein_coding retained_intron MGP_129S1SvImJ_T0030907.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78715148 78729925 + MGP_129S1SvImJ_P0030907 Myo18a protein_coding protein_coding MGP_129S1SvImJ_T0030908.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78716281 78820533 + MGP_129S1SvImJ_P0030908 Myo18a protein_coding protein_coding MGP_129S1SvImJ_T0030909.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78721685 78820533 + MGP_129S1SvImJ_P0030909 Myo18a protein_coding protein_coding MGP_129S1SvImJ_T0030910.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78729783 78820533 + MGP_129S1SvImJ_P0030910 Myo18a protein_coding protein_coding MGP_129S1SvImJ_T0030911.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78729783 78820533 + MGP_129S1SvImJ_P0030911 Myo18a protein_coding protein_coding MGP_129S1SvImJ_T0030912.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78729811 78819696 + MGP_129S1SvImJ_P0030912 Myo18a protein_coding protein_coding MGP_129S1SvImJ_T0030913.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78729811 78819695 + MGP_129S1SvImJ_P0030913 Myo18a protein_coding protein_coding MGP_129S1SvImJ_T0030914.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78729834 78819401 + MGP_129S1SvImJ_P0030914 Myo18a protein_coding protein_coding MGP_129S1SvImJ_T0030916.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78754704 78820390 + MGP_129S1SvImJ_P0030916 Myo18a protein_coding protein_coding MGP_129S1SvImJ_T0030917.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78754743 78765829 + MGP_129S1SvImJ_P0030917 Myo18a protein_coding protein_coding MGP_129S1SvImJ_T0030918.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78754756 78820533 + MGP_129S1SvImJ_P0030918 Myo18a protein_coding protein_coding MGP_129S1SvImJ_T0030919.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78754756 78819662 + MGP_129S1SvImJ_P0030919 Myo18a protein_coding protein_coding MGP_129S1SvImJ_T0030920.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78754781 78819390 + MGP_129S1SvImJ_P0030920 Myo18a protein_coding protein_coding MGP_129S1SvImJ_T0030921.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78754781 78819609 + MGP_129S1SvImJ_P0030921 Myo18a protein_coding protein_coding MGP_129S1SvImJ_T0030922.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78764774 78820533 + MGP_129S1SvImJ_P0030922 Myo18a protein_coding protein_coding MGP_129S1SvImJ_T0030923.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78777852 78780940 + Myo18a protein_coding processed_transcript MGP_129S1SvImJ_T0030924.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78791388 78794870 + Myo18a protein_coding processed_transcript MGP_129S1SvImJ_T0030925.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78794234 78799494 + Myo18a protein_coding retained_intron MGP_129S1SvImJ_T0030926.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78804066 78808007 + Myo18a protein_coding retained_intron MGP_129S1SvImJ_T0030927.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78805271 78807878 + Myo18a protein_coding retained_intron MGP_129S1SvImJ_T0030928.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78808416 78813915 + MGP_129S1SvImJ_P0030928 Myo18a protein_coding protein_coding MGP_129S1SvImJ_T0030929.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78812031 78819629 + Myo18a protein_coding retained_intron MGP_129S1SvImJ_T0030930.1 MGP_129S1SvImJ_G0018755.1 mouse_genomes_project 11 78814839 78819748 + Myo18a protein_coding processed_transcript MGP_129S1SvImJ_T0006204.1 MGP_129S1SvImJ_G0005183.1 mouse_genomes_project 11 20426761 20429851 - Gm12055 lincRNA lincRNA MGP_129S1SvImJ_T0032322.1 MGP_129S1SvImJ_G0019145.1 mouse_genomes_project 11 102955122 102957991 - Krt14 protein_coding processed_transcript MGP_129S1SvImJ_T0032323.1 MGP_129S1SvImJ_G0019145.1 mouse_genomes_project 11 102955122 102959485 - MGP_129S1SvImJ_P0032323 Krt14 protein_coding protein_coding MGP_129S1SvImJ_T0028605.1 MGP_129S1SvImJ_G0018169.1 mouse_genomes_project 11 41775971 41777484 + MGP_129S1SvImJ_P0028605 Gm9972 protein_coding protein_coding MGP_129S1SvImJ_T0031972.1 MGP_129S1SvImJ_G0019021.1 mouse_genomes_project 11 99412365 99419860 - MGP_129S1SvImJ_P0031972 Lrrc46 protein_coding protein_coding MGP_129S1SvImJ_T0098301.1 MGP_129S1SvImJ_G0036386.1 mouse_genomes_project 11 74083603 74084553 - pseudogene pseudogene MGP_129S1SvImJ_T0100546.1 MGP_129S1SvImJ_G0038613.1 mouse_genomes_project 11 125561023 125561148 + Gm22152 snoRNA snoRNA MGP_129S1SvImJ_T0027900.1 MGP_129S1SvImJ_G0017999.1 mouse_genomes_project 11 2218850 2293756 - MGP_129S1SvImJ_P0027900 Kremen1 protein_coding protein_coding MGP_129S1SvImJ_T0027901.1 MGP_129S1SvImJ_G0017999.1 mouse_genomes_project 11 2231783 2266831 - MGP_129S1SvImJ_P0027901 Kremen1 protein_coding protein_coding MGP_129S1SvImJ_T0031892.1 MGP_129S1SvImJ_G0019002.1 mouse_genomes_project 11 98592197 98595477 + MGP_129S1SvImJ_P0031892 Hoxb8 protein_coding protein_coding MGP_129S1SvImJ_T0031893.1 MGP_129S1SvImJ_G0019002.1 mouse_genomes_project 11 98592848 98594477 + MGP_129S1SvImJ_P0031893 Hoxb8 protein_coding protein_coding MGP_129S1SvImJ_T0031894.1 MGP_129S1SvImJ_G0019002.1 mouse_genomes_project 11 98593017 98594855 + MGP_129S1SvImJ_P0031894 Hoxb8 protein_coding protein_coding MGP_129S1SvImJ_T0029926.1 MGP_129S1SvImJ_G0018521.1 mouse_genomes_project 11 69531183 69554480 + MGP_129S1SvImJ_P0029926 Aloxe3 protein_coding protein_coding MGP_129S1SvImJ_T0029927.1 MGP_129S1SvImJ_G0018521.1 mouse_genomes_project 11 69531502 69540736 + Aloxe3 protein_coding retained_intron MGP_129S1SvImJ_T0029928.1 MGP_129S1SvImJ_G0018521.1 mouse_genomes_project 11 69531690 69539780 + MGP_129S1SvImJ_P0029928 Aloxe3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029929.1 MGP_129S1SvImJ_G0018521.1 mouse_genomes_project 11 69539397 69540362 + Aloxe3 protein_coding retained_intron MGP_129S1SvImJ_T0029930.1 MGP_129S1SvImJ_G0018521.1 mouse_genomes_project 11 69539572 69548104 + Aloxe3 protein_coding retained_intron MGP_129S1SvImJ_T0029931.1 MGP_129S1SvImJ_G0018521.1 mouse_genomes_project 11 69540767 69548182 + Aloxe3 protein_coding retained_intron MGP_129S1SvImJ_T0012620.1 MGP_129S1SvImJ_G0010709.1 mouse_genomes_project 11 53416103 53416546 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006313.1 MGP_129S1SvImJ_G0005271.1 mouse_genomes_project 11 85947257 85957401 + Lhx1os lincRNA lincRNA MGP_129S1SvImJ_T0006314.1 MGP_129S1SvImJ_G0005271.1 mouse_genomes_project 11 85947266 85957401 + Lhx1os lincRNA lincRNA MGP_129S1SvImJ_T0006315.1 MGP_129S1SvImJ_G0005271.1 mouse_genomes_project 11 85947281 85957400 + Lhx1os lincRNA lincRNA MGP_129S1SvImJ_T0100525.1 MGP_129S1SvImJ_G0038592.1 mouse_genomes_project 11 81018141 81018273 - Gm24454 snoRNA snoRNA MGP_129S1SvImJ_T0006231.1 MGP_129S1SvImJ_G0005204.1 mouse_genomes_project 11 31350932 31354358 + lincRNA lincRNA MGP_129S1SvImJ_T0027989.1 MGP_129S1SvImJ_G0018022.1 mouse_genomes_project 11 3528944 3533177 + MGP_129S1SvImJ_P0027989 Ppia protein_coding protein_coding MGP_129S1SvImJ_T0027990.1 MGP_129S1SvImJ_G0018022.1 mouse_genomes_project 11 3529369 3531939 + Ppia protein_coding retained_intron MGP_129S1SvImJ_T0027991.1 MGP_129S1SvImJ_G0018022.1 mouse_genomes_project 11 3529371 3533175 + Ppia protein_coding processed_transcript MGP_129S1SvImJ_T0027992.1 MGP_129S1SvImJ_G0018022.1 mouse_genomes_project 11 3529377 3533063 + Ppia protein_coding retained_intron MGP_129S1SvImJ_T0027993.1 MGP_129S1SvImJ_G0018022.1 mouse_genomes_project 11 3529377 3533172 + Ppia protein_coding retained_intron MGP_129S1SvImJ_T0031897.1 MGP_129S1SvImJ_G0019004.1 mouse_genomes_project 11 98604289 98613276 + MGP_129S1SvImJ_P0031897 Hoxb6 protein_coding protein_coding MGP_129S1SvImJ_T0031898.1 MGP_129S1SvImJ_G0019004.1 mouse_genomes_project 11 98610877 98613275 + MGP_129S1SvImJ_P0031898 Hoxb6 protein_coding protein_coding MGP_129S1SvImJ_T0033870.1 MGP_129S1SvImJ_G0019464.1 mouse_genomes_project 11 122624211 122680568 - MGP_129S1SvImJ_P0033870 Timp2 protein_coding protein_coding MGP_129S1SvImJ_T0029446.1 MGP_129S1SvImJ_G0018416.1 mouse_genomes_project 11 60277594 60296645 - MGP_129S1SvImJ_P0029446 Atpaf2 protein_coding protein_coding MGP_129S1SvImJ_T0029447.1 MGP_129S1SvImJ_G0018416.1 mouse_genomes_project 11 60278447 60296612 - MGP_129S1SvImJ_P0029447 Atpaf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029448.1 MGP_129S1SvImJ_G0018416.1 mouse_genomes_project 11 60280811 60296636 - Atpaf2 protein_coding processed_transcript MGP_129S1SvImJ_T0029449.1 MGP_129S1SvImJ_G0018416.1 mouse_genomes_project 11 60282768 60296629 - Atpaf2 protein_coding processed_transcript MGP_129S1SvImJ_T0029450.1 MGP_129S1SvImJ_G0018416.1 mouse_genomes_project 11 60284347 60298057 - Atpaf2 protein_coding processed_transcript MGP_129S1SvImJ_T0029451.1 MGP_129S1SvImJ_G0018416.1 mouse_genomes_project 11 60286184 60296630 - Atpaf2 protein_coding retained_intron MGP_129S1SvImJ_T0012746.1 MGP_129S1SvImJ_G0010835.1 mouse_genomes_project 11 101961450 101962406 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032561.1 MGP_129S1SvImJ_G0019200.1 mouse_genomes_project 11 104276582 104283100 - MGP_129S1SvImJ_P0032561 Ptges3l protein_coding protein_coding MGP_129S1SvImJ_T0032562.1 MGP_129S1SvImJ_G0019200.1 mouse_genomes_project 11 104276582 104282436 - MGP_129S1SvImJ_P0032562 Ptges3l protein_coding protein_coding MGP_129S1SvImJ_T0032563.1 MGP_129S1SvImJ_G0019200.1 mouse_genomes_project 11 104278641 104282436 - MGP_129S1SvImJ_P0032563 Ptges3l protein_coding protein_coding MGP_129S1SvImJ_T0032564.1 MGP_129S1SvImJ_G0019200.1 mouse_genomes_project 11 104279188 104281623 - MGP_129S1SvImJ_P0032564 Ptges3l protein_coding protein_coding MGP_129S1SvImJ_T0032565.1 MGP_129S1SvImJ_G0019200.1 mouse_genomes_project 11 104279598 104281999 - Ptges3l protein_coding retained_intron MGP_129S1SvImJ_T0031481.1 MGP_129S1SvImJ_G0018898.1 mouse_genomes_project 11 88653708 88662898 - MGP_129S1SvImJ_P0031481 Smg8 protein_coding protein_coding MGP_129S1SvImJ_T0031482.1 MGP_129S1SvImJ_G0018898.1 mouse_genomes_project 11 88653712 88661506 - MGP_129S1SvImJ_P0031482 Smg8 protein_coding protein_coding MGP_129S1SvImJ_T0030039.1 MGP_129S1SvImJ_G0018547.1 mouse_genomes_project 11 70132128 70140858 - MGP_129S1SvImJ_P0030039 Senp3 protein_coding protein_coding MGP_129S1SvImJ_T0030040.1 MGP_129S1SvImJ_G0018547.1 mouse_genomes_project 11 70132129 70133990 - Senp3 protein_coding retained_intron MGP_129S1SvImJ_T0030041.1 MGP_129S1SvImJ_G0018547.1 mouse_genomes_project 11 70132134 70141096 - MGP_129S1SvImJ_P0030041 Senp3 protein_coding protein_coding MGP_129S1SvImJ_T0030042.1 MGP_129S1SvImJ_G0018547.1 mouse_genomes_project 11 70132288 70137133 - Senp3 protein_coding retained_intron MGP_129S1SvImJ_T0030043.1 MGP_129S1SvImJ_G0018547.1 mouse_genomes_project 11 70132354 70137701 - MGP_129S1SvImJ_P0030043 Senp3 protein_coding protein_coding MGP_129S1SvImJ_T0030044.1 MGP_129S1SvImJ_G0018547.1 mouse_genomes_project 11 70132966 70133457 - Senp3 protein_coding retained_intron MGP_129S1SvImJ_T0030045.1 MGP_129S1SvImJ_G0018547.1 mouse_genomes_project 11 70133246 70135961 - Senp3 protein_coding processed_transcript MGP_129S1SvImJ_T0030046.1 MGP_129S1SvImJ_G0018547.1 mouse_genomes_project 11 70136061 70137027 - Senp3 protein_coding retained_intron MGP_129S1SvImJ_T0030047.1 MGP_129S1SvImJ_G0018547.1 mouse_genomes_project 11 70137170 70138209 - Senp3 protein_coding retained_intron MGP_129S1SvImJ_T0012491.1 MGP_129S1SvImJ_G0010580.1 mouse_genomes_project 11 5331741 5333453 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098443.1 MGP_129S1SvImJ_G0036528.1 mouse_genomes_project 11 3367822 3367936 + n-R5s67 rRNA rRNA MGP_129S1SvImJ_T0100492.1 MGP_129S1SvImJ_G0038559.1 mouse_genomes_project 11 33196415 33196542 - Gm22022 snoRNA snoRNA MGP_129S1SvImJ_T0011330.1 MGP_129S1SvImJ_G0009446.1 mouse_genomes_project 11 97139519 97139635 + Gm24877 misc_RNA misc_RNA MGP_129S1SvImJ_T0031761.1 MGP_129S1SvImJ_G0018964.1 mouse_genomes_project 11 96754191 96762836 - MGP_129S1SvImJ_P0031761 Eme1 protein_coding protein_coding MGP_129S1SvImJ_T0031762.1 MGP_129S1SvImJ_G0018964.1 mouse_genomes_project 11 96756927 96759736 - Eme1 protein_coding processed_transcript MGP_129S1SvImJ_T0031763.1 MGP_129S1SvImJ_G0018964.1 mouse_genomes_project 11 96759099 96759911 - Eme1 protein_coding processed_transcript MGP_129S1SvImJ_T0031764.1 MGP_129S1SvImJ_G0018964.1 mouse_genomes_project 11 96759780 96762543 - Eme1 protein_coding processed_transcript MGP_129S1SvImJ_T0006399.1 MGP_129S1SvImJ_G0005334.1 mouse_genomes_project 11 125113782 125115140 + Gm17586 lincRNA lincRNA MGP_129S1SvImJ_T0034101.1 MGP_129S1SvImJ_G0019510.1 mouse_genomes_project 11 125029517 125042474 - MGP_129S1SvImJ_P0034101 P4hb protein_coding protein_coding MGP_129S1SvImJ_T0034102.1 MGP_129S1SvImJ_G0019510.1 mouse_genomes_project 11 125029524 125030456 - P4hb protein_coding processed_transcript MGP_129S1SvImJ_T0034103.1 MGP_129S1SvImJ_G0019510.1 mouse_genomes_project 11 125030164 125042062 - MGP_129S1SvImJ_P0034103 P4hb protein_coding protein_coding MGP_129S1SvImJ_T0012658.1 MGP_129S1SvImJ_G0010747.1 mouse_genomes_project 11 63344118 63344351 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029381.1 MGP_129S1SvImJ_G0018405.1 mouse_genomes_project 11 59634195 59637945 - Pld6 protein_coding processed_transcript MGP_129S1SvImJ_T0029382.1 MGP_129S1SvImJ_G0018405.1 mouse_genomes_project 11 59635002 59637942 - MGP_129S1SvImJ_P0029382 Pld6 protein_coding protein_coding MGP_129S1SvImJ_T0028750.1 MGP_129S1SvImJ_G0018215.1 mouse_genomes_project 11 48108885 48115230 - MGP_129S1SvImJ_P0028750 Tgtp2 protein_coding protein_coding MGP_129S1SvImJ_T0032011.1 MGP_129S1SvImJ_G0019029.1 mouse_genomes_project 11 99744175 99766396 - MGP_129S1SvImJ_P0032011 Gpr179 protein_coding protein_coding MGP_129S1SvImJ_T0032012.1 MGP_129S1SvImJ_G0019029.1 mouse_genomes_project 11 99763810 99766457 - Gpr179 protein_coding retained_intron MGP_129S1SvImJ_T0017292.1 MGP_129S1SvImJ_G0015213.1 mouse_genomes_project 11 107720309 107729339 - Gm22000 processed_transcript processed_transcript MGP_129S1SvImJ_T0030085.1 MGP_129S1SvImJ_G0018561.1 mouse_genomes_project 11 70329413 70334074 + MGP_129S1SvImJ_P0030085 Plscr3 protein_coding protein_coding MGP_129S1SvImJ_T0030086.1 MGP_129S1SvImJ_G0018561.1 mouse_genomes_project 11 70329654 70335096 + MGP_129S1SvImJ_P0030086 Plscr3 protein_coding protein_coding MGP_129S1SvImJ_T0030087.1 MGP_129S1SvImJ_G0018561.1 mouse_genomes_project 11 70329654 70331413 + MGP_129S1SvImJ_P0030087 Plscr3 protein_coding protein_coding MGP_129S1SvImJ_T0030088.1 MGP_129S1SvImJ_G0018561.1 mouse_genomes_project 11 70329713 70334081 + MGP_129S1SvImJ_P0030088 Plscr3 protein_coding protein_coding MGP_129S1SvImJ_T0012761.1 MGP_129S1SvImJ_G0010850.1 mouse_genomes_project 11 106693281 106694145 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009700.1 MGP_129S1SvImJ_G0007816.1 mouse_genomes_project 11 60643138 60643202 + Mir5100 miRNA miRNA MGP_129S1SvImJ_T0099225.1 MGP_129S1SvImJ_G0037292.1 mouse_genomes_project 11 16164506 16164608 + Gm23093 snRNA snRNA MGP_129S1SvImJ_T0028461.1 MGP_129S1SvImJ_G0018129.1 mouse_genomes_project 11 30423165 30472586 - MGP_129S1SvImJ_P0028461 Nprl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028466.1 MGP_129S1SvImJ_G0018129.1 mouse_genomes_project 11 30428800 30458991 - Nprl3 protein_coding processed_transcript MGP_129S1SvImJ_T0028467.1 MGP_129S1SvImJ_G0018129.1 mouse_genomes_project 11 30428800 30472586 - MGP_129S1SvImJ_P0028467 Nprl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028468.1 MGP_129S1SvImJ_G0018129.1 mouse_genomes_project 11 30429500 30472604 - MGP_129S1SvImJ_P0028468 Nprl3 protein_coding protein_coding MGP_129S1SvImJ_T0028469.1 MGP_129S1SvImJ_G0018129.1 mouse_genomes_project 11 30429591 30472555 - MGP_129S1SvImJ_P0028469 Nprl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028470.1 MGP_129S1SvImJ_G0018129.1 mouse_genomes_project 11 30430472 30431948 - Nprl3 protein_coding retained_intron MGP_129S1SvImJ_T0028471.1 MGP_129S1SvImJ_G0018129.1 mouse_genomes_project 11 30430480 30472526 - MGP_129S1SvImJ_P0028471 Nprl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028472.1 MGP_129S1SvImJ_G0018129.1 mouse_genomes_project 11 30430488 30472444 - MGP_129S1SvImJ_P0028472 Nprl3 protein_coding protein_coding MGP_129S1SvImJ_T0028473.1 MGP_129S1SvImJ_G0018129.1 mouse_genomes_project 11 30434393 30437488 - Nprl3 protein_coding retained_intron MGP_129S1SvImJ_T0028474.1 MGP_129S1SvImJ_G0018129.1 mouse_genomes_project 11 30434439 30435583 - Nprl3 protein_coding retained_intron MGP_129S1SvImJ_T0028475.1 MGP_129S1SvImJ_G0018129.1 mouse_genomes_project 11 30437346 30456637 - Nprl3 protein_coding retained_intron MGP_129S1SvImJ_T0028476.1 MGP_129S1SvImJ_G0018129.1 mouse_genomes_project 11 30437409 30472555 - MGP_129S1SvImJ_P0028476 Nprl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028477.1 MGP_129S1SvImJ_G0018129.1 mouse_genomes_project 11 30440036 30452756 - Nprl3 protein_coding processed_transcript MGP_129S1SvImJ_T0028478.1 MGP_129S1SvImJ_G0018129.1 mouse_genomes_project 11 30450356 30452856 - Nprl3 protein_coding processed_transcript MGP_129S1SvImJ_T0028479.1 MGP_129S1SvImJ_G0018129.1 mouse_genomes_project 11 30452740 30472512 - MGP_129S1SvImJ_P0028479 Nprl3 protein_coding protein_coding MGP_129S1SvImJ_T0028480.1 MGP_129S1SvImJ_G0018129.1 mouse_genomes_project 11 30465010 30472448 - Nprl3 protein_coding processed_transcript MGP_129S1SvImJ_T0017188.1 MGP_129S1SvImJ_G0015153.1 mouse_genomes_project 11 8927058 8973091 - Gm11999 processed_transcript processed_transcript MGP_129S1SvImJ_T0003182.1 MGP_129S1SvImJ_G0002956.1 mouse_genomes_project 11 52846478 52847713 - Gm12212 antisense antisense MGP_129S1SvImJ_T0099291.1 MGP_129S1SvImJ_G0037358.1 mouse_genomes_project 11 109468096 109468240 - Gm25556 snRNA snRNA MGP_129S1SvImJ_T0031887.1 MGP_129S1SvImJ_G0018999.1 mouse_genomes_project 11 98425140 98456270 + MGP_129S1SvImJ_P0031887 Ttll6 protein_coding protein_coding MGP_129S1SvImJ_T0031888.1 MGP_129S1SvImJ_G0018999.1 mouse_genomes_project 11 98425140 98464178 + MGP_129S1SvImJ_P0031888 Ttll6 protein_coding protein_coding MGP_129S1SvImJ_T0032641.1 MGP_129S1SvImJ_G0019216.1 mouse_genomes_project 11 104925661 104933612 + MGP_129S1SvImJ_P0032641 1700006E09Rik protein_coding protein_coding MGP_129S1SvImJ_T0032642.1 MGP_129S1SvImJ_G0019216.1 mouse_genomes_project 11 104925666 104932206 + MGP_129S1SvImJ_P0032642 1700006E09Rik protein_coding protein_coding MGP_129S1SvImJ_T0032643.1 MGP_129S1SvImJ_G0019216.1 mouse_genomes_project 11 104928435 104933620 + MGP_129S1SvImJ_P0032643 1700006E09Rik protein_coding protein_coding MGP_129S1SvImJ_T0009709.1 MGP_129S1SvImJ_G0007825.1 mouse_genomes_project 11 70119948 70120031 + Mir1934 miRNA miRNA MGP_129S1SvImJ_T0009716.1 MGP_129S1SvImJ_G0007832.1 mouse_genomes_project 11 70971535 70971599 + Mir7115 miRNA miRNA MGP_129S1SvImJ_T0012616.1 MGP_129S1SvImJ_G0010705.1 mouse_genomes_project 11 53051918 53054255 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009698.1 MGP_129S1SvImJ_G0007814.1 mouse_genomes_project 11 60071029 60071095 - Mir6922 miRNA miRNA MGP_129S1SvImJ_T0012515.1 MGP_129S1SvImJ_G0010604.1 mouse_genomes_project 11 15757997 15760683 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031859.1 MGP_129S1SvImJ_G0018991.1 mouse_genomes_project 11 98076150 98084667 + MGP_129S1SvImJ_P0031859 Gngt2 protein_coding protein_coding MGP_129S1SvImJ_T0031860.1 MGP_129S1SvImJ_G0018991.1 mouse_genomes_project 11 98081227 98084667 + MGP_129S1SvImJ_P0031860 Gngt2 protein_coding protein_coding MGP_129S1SvImJ_T0031861.1 MGP_129S1SvImJ_G0018991.1 mouse_genomes_project 11 98081241 98084667 + MGP_129S1SvImJ_P0031861 Gngt2 protein_coding protein_coding MGP_129S1SvImJ_T0031862.1 MGP_129S1SvImJ_G0018991.1 mouse_genomes_project 11 98081601 98084667 + MGP_129S1SvImJ_P0031862 Gngt2 protein_coding protein_coding MGP_129S1SvImJ_T0031863.1 MGP_129S1SvImJ_G0018991.1 mouse_genomes_project 11 98081602 98084667 + MGP_129S1SvImJ_P0031863 Gngt2 protein_coding protein_coding MGP_129S1SvImJ_T0031864.1 MGP_129S1SvImJ_G0018991.1 mouse_genomes_project 11 98082164 98084667 + MGP_129S1SvImJ_P0031864 Gngt2 protein_coding protein_coding MGP_129S1SvImJ_T0031865.1 MGP_129S1SvImJ_G0018991.1 mouse_genomes_project 11 98082541 98084667 + MGP_129S1SvImJ_P0031865 Gngt2 protein_coding protein_coding MGP_129S1SvImJ_T0006329.1 MGP_129S1SvImJ_G0005281.1 mouse_genomes_project 11 90757313 90760642 - Gm11496 lincRNA lincRNA MGP_129S1SvImJ_T0032171.1 MGP_129S1SvImJ_G0019069.1 mouse_genomes_project 11 101293819 101298469 + MGP_129S1SvImJ_P0032171 Csf3 protein_coding protein_coding MGP_129S1SvImJ_T0012612.1 MGP_129S1SvImJ_G0010701.1 mouse_genomes_project 11 51817228 51817415 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011336.1 MGP_129S1SvImJ_G0009452.1 mouse_genomes_project 11 111257418 111257705 + Gm23120 misc_RNA misc_RNA MGP_129S1SvImJ_T0003277.1 MGP_129S1SvImJ_G0003033.1 mouse_genomes_project 11 90606082 90639059 + 4930556N13Rik antisense antisense MGP_129S1SvImJ_T0100499.1 MGP_129S1SvImJ_G0038566.1 mouse_genomes_project 11 51002646 51002790 - Gm25291 snoRNA snoRNA MGP_129S1SvImJ_T0027736.1 MGP_129S1SvImJ_G0017964.1 mouse_genomes_project 11 788238 805259 - MGP_129S1SvImJ_P0027736 4921536K21Rik protein_coding protein_coding MGP_129S1SvImJ_T0012581.1 MGP_129S1SvImJ_G0010670.1 mouse_genomes_project 11 39081041 39081703 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031699.1 MGP_129S1SvImJ_G0018953.1 mouse_genomes_project 11 96359073 96395053 - MGP_129S1SvImJ_P0031699 Luc7l3 protein_coding protein_coding MGP_129S1SvImJ_T0031700.1 MGP_129S1SvImJ_G0018953.1 mouse_genomes_project 11 96362255 96368260 - MGP_129S1SvImJ_P0031700 Luc7l3 protein_coding protein_coding MGP_129S1SvImJ_T0031701.1 MGP_129S1SvImJ_G0018953.1 mouse_genomes_project 11 96362255 96395083 - MGP_129S1SvImJ_P0031701 Luc7l3 protein_coding protein_coding MGP_129S1SvImJ_T0031702.1 MGP_129S1SvImJ_G0018953.1 mouse_genomes_project 11 96362333 96395083 - MGP_129S1SvImJ_P0031702 Luc7l3 protein_coding protein_coding MGP_129S1SvImJ_T0031703.1 MGP_129S1SvImJ_G0018953.1 mouse_genomes_project 11 96362333 96395083 - MGP_129S1SvImJ_P0031703 Luc7l3 protein_coding protein_coding MGP_129S1SvImJ_T0031704.1 MGP_129S1SvImJ_G0018953.1 mouse_genomes_project 11 96362523 96364414 - MGP_129S1SvImJ_P0031704 Luc7l3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031705.1 MGP_129S1SvImJ_G0018953.1 mouse_genomes_project 11 96363964 96394990 - MGP_129S1SvImJ_P0031705 Luc7l3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031706.1 MGP_129S1SvImJ_G0018953.1 mouse_genomes_project 11 96368199 96369411 - Luc7l3 protein_coding retained_intron MGP_129S1SvImJ_T0031707.1 MGP_129S1SvImJ_G0018953.1 mouse_genomes_project 11 96368207 96370217 - Luc7l3 protein_coding processed_transcript MGP_129S1SvImJ_T0031708.1 MGP_129S1SvImJ_G0018953.1 mouse_genomes_project 11 96368248 96372821 - Luc7l3 protein_coding retained_intron MGP_129S1SvImJ_T0012684.1 MGP_129S1SvImJ_G0010773.1 mouse_genomes_project 11 74768775 74769397 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011322.1 MGP_129S1SvImJ_G0009438.1 mouse_genomes_project 11 59964451 59964578 + Gm27511 misc_RNA misc_RNA MGP_129S1SvImJ_T0030963.1 MGP_129S1SvImJ_G0018763.1 mouse_genomes_project 11 79069493 79138370 + MGP_129S1SvImJ_P0030963 Fam222b protein_coding protein_coding MGP_129S1SvImJ_T0030964.1 MGP_129S1SvImJ_G0018763.1 mouse_genomes_project 11 79069541 79137745 + MGP_129S1SvImJ_P0030964 Fam222b protein_coding protein_coding MGP_129S1SvImJ_T0030965.1 MGP_129S1SvImJ_G0018763.1 mouse_genomes_project 11 79093393 79138370 + MGP_129S1SvImJ_P0030965 Fam222b protein_coding protein_coding MGP_129S1SvImJ_T0027771.1 MGP_129S1SvImJ_G0017973.1 mouse_genomes_project 11 1014766 1018743 - MGP_129S1SvImJ_P0027771 Mtfp1 protein_coding protein_coding MGP_129S1SvImJ_T0027772.1 MGP_129S1SvImJ_G0017973.1 mouse_genomes_project 11 1017720 1018427 - Mtfp1 protein_coding processed_transcript MGP_129S1SvImJ_T0031660.1 MGP_129S1SvImJ_G0018944.1 mouse_genomes_project 11 95886384 95913865 - Utp18 protein_coding processed_transcript MGP_129S1SvImJ_T0031661.1 MGP_129S1SvImJ_G0018944.1 mouse_genomes_project 11 95886384 95913865 - MGP_129S1SvImJ_P0031661 Utp18 protein_coding protein_coding MGP_129S1SvImJ_T0031662.1 MGP_129S1SvImJ_G0018944.1 mouse_genomes_project 11 95902839 95903600 - Utp18 protein_coding processed_transcript MGP_129S1SvImJ_T0006321.1 MGP_129S1SvImJ_G0005277.1 mouse_genomes_project 11 89740561 89750087 + Gm15892 lincRNA lincRNA MGP_129S1SvImJ_T0006322.1 MGP_129S1SvImJ_G0005277.1 mouse_genomes_project 11 89748972 89749635 + Gm15892 lincRNA lincRNA MGP_129S1SvImJ_T0006323.1 MGP_129S1SvImJ_G0005277.1 mouse_genomes_project 11 89749032 89750063 + Gm15892 lincRNA lincRNA MGP_129S1SvImJ_T0011314.1 MGP_129S1SvImJ_G0009430.1 mouse_genomes_project 11 534954 535101 - Gm27640 misc_RNA misc_RNA MGP_129S1SvImJ_T0100539.1 MGP_129S1SvImJ_G0038606.1 mouse_genomes_project 11 109800901 109801036 + Gm22711 snoRNA snoRNA MGP_129S1SvImJ_T0030799.1 MGP_129S1SvImJ_G0018730.1 mouse_genomes_project 11 77030376 77039879 - MGP_129S1SvImJ_P0030799 Gemin4 protein_coding protein_coding MGP_129S1SvImJ_T0030801.1 MGP_129S1SvImJ_G0018730.1 mouse_genomes_project 11 77039293 77039732 - MGP_129S1SvImJ_P0030801 Gemin4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028191.1 MGP_129S1SvImJ_G0018071.1 mouse_genomes_project 11 18833647 18919817 + MGP_129S1SvImJ_P0028191 Vps54 protein_coding protein_coding MGP_129S1SvImJ_T0028192.1 MGP_129S1SvImJ_G0018071.1 mouse_genomes_project 11 18833647 18919831 + MGP_129S1SvImJ_P0028192 Vps54 protein_coding protein_coding MGP_129S1SvImJ_T0028193.1 MGP_129S1SvImJ_G0018071.1 mouse_genomes_project 11 18863617 18919019 + MGP_129S1SvImJ_P0028193 Vps54 protein_coding protein_coding MGP_129S1SvImJ_T0028194.1 MGP_129S1SvImJ_G0018071.1 mouse_genomes_project 11 18873794 18888881 + Vps54 protein_coding processed_transcript MGP_129S1SvImJ_T0028195.1 MGP_129S1SvImJ_G0018071.1 mouse_genomes_project 11 18897622 18904532 + Vps54 protein_coding processed_transcript MGP_129S1SvImJ_T0028196.1 MGP_129S1SvImJ_G0018071.1 mouse_genomes_project 11 18911189 18913678 + Vps54 protein_coding processed_transcript MGP_129S1SvImJ_T0028197.1 MGP_129S1SvImJ_G0018071.1 mouse_genomes_project 11 18912765 18919232 + Vps54 protein_coding processed_transcript MGP_129S1SvImJ_T0032051.1 MGP_129S1SvImJ_G0019040.1 mouse_genomes_project 11 100241446 100247457 - MGP_129S1SvImJ_P0032051 1700001P01Rik protein_coding protein_coding MGP_129S1SvImJ_T0003302.1 MGP_129S1SvImJ_G0003052.1 mouse_genomes_project 11 100183394 100185443 + Gm11614 antisense antisense MGP_129S1SvImJ_T0003219.1 MGP_129S1SvImJ_G0002987.1 mouse_genomes_project 11 62830683 62838892 + antisense antisense MGP_129S1SvImJ_T0011821.1 MGP_129S1SvImJ_G0009933.1 mouse_genomes_project 11 74934453 74935425 + MGP_129S1SvImJ_P0011821 Olfr404-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0032984.1 MGP_129S1SvImJ_G0019282.1 mouse_genomes_project 11 108360081 108360450 + MGP_129S1SvImJ_P0032984 Gm10842 protein_coding protein_coding MGP_129S1SvImJ_T0028800.1 MGP_129S1SvImJ_G0018233.1 mouse_genomes_project 11 48627409 48636263 + MGP_129S1SvImJ_P0028800 Olfr1383 protein_coding protein_coding MGP_129S1SvImJ_T0028801.1 MGP_129S1SvImJ_G0018233.1 mouse_genomes_project 11 48635159 48636263 + MGP_129S1SvImJ_P0028801 Olfr1383 protein_coding protein_coding MGP_129S1SvImJ_T0099270.1 MGP_129S1SvImJ_G0037337.1 mouse_genomes_project 11 89029101 89029265 + Rnu1a1 snRNA snRNA MGP_129S1SvImJ_T0006381.1 MGP_129S1SvImJ_G0005319.1 mouse_genomes_project 11 120068193 120073764 - B230344G16Rik lincRNA lincRNA MGP_129S1SvImJ_T0031300.1 MGP_129S1SvImJ_G0018855.1 mouse_genomes_project 11 85009046 85009622 - MGP_129S1SvImJ_P0031300 Rpl9-ps1 protein_coding protein_coding MGP_129S1SvImJ_T0027941.1 MGP_129S1SvImJ_G0018012.1 mouse_genomes_project 11 2987564 3003630 - MGP_129S1SvImJ_P0027941 Gck protein_coding protein_coding MGP_129S1SvImJ_T0027942.1 MGP_129S1SvImJ_G0018012.1 mouse_genomes_project 11 2987564 3003630 - MGP_129S1SvImJ_P0027942 Gck protein_coding protein_coding MGP_129S1SvImJ_T0027943.1 MGP_129S1SvImJ_G0018012.1 mouse_genomes_project 11 2987567 3044533 - MGP_129S1SvImJ_P0027943 Gck protein_coding protein_coding MGP_129S1SvImJ_T0027944.1 MGP_129S1SvImJ_G0018012.1 mouse_genomes_project 11 2988313 2988832 - MGP_129S1SvImJ_P0027944 Gck protein_coding protein_coding MGP_129S1SvImJ_T0027756.1 MGP_129S1SvImJ_G0017971.1 mouse_genomes_project 11 947057 959036 + Sec14l4 protein_coding processed_transcript MGP_129S1SvImJ_T0027757.1 MGP_129S1SvImJ_G0017971.1 mouse_genomes_project 11 947060 960302 + Sec14l4 protein_coding processed_transcript MGP_129S1SvImJ_T0027758.1 MGP_129S1SvImJ_G0017971.1 mouse_genomes_project 11 947207 959922 + Sec14l4 protein_coding processed_transcript MGP_129S1SvImJ_T0027759.1 MGP_129S1SvImJ_G0017971.1 mouse_genomes_project 11 947377 963518 + Sec14l4 protein_coding processed_transcript MGP_129S1SvImJ_T0027760.1 MGP_129S1SvImJ_G0017971.1 mouse_genomes_project 11 947377 965198 + Sec14l4 protein_coding processed_transcript MGP_129S1SvImJ_T0027761.1 MGP_129S1SvImJ_G0017971.1 mouse_genomes_project 11 947377 965198 + MGP_129S1SvImJ_P0027761 Sec14l4 protein_coding protein_coding MGP_129S1SvImJ_T0027762.1 MGP_129S1SvImJ_G0017971.1 mouse_genomes_project 11 947436 963518 + Sec14l4 protein_coding processed_transcript MGP_129S1SvImJ_T0027763.1 MGP_129S1SvImJ_G0017971.1 mouse_genomes_project 11 947440 963525 + MGP_129S1SvImJ_P0027763 Sec14l4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0027764.1 MGP_129S1SvImJ_G0017971.1 mouse_genomes_project 11 957460 963518 + Sec14l4 protein_coding processed_transcript MGP_129S1SvImJ_T0027765.1 MGP_129S1SvImJ_G0017971.1 mouse_genomes_project 11 959897 963525 + MGP_129S1SvImJ_P0027765 Sec14l4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0012576.1 MGP_129S1SvImJ_G0010665.1 mouse_genomes_project 11 31740962 31741494 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034259.1 MGP_129S1SvImJ_G0019540.1 mouse_genomes_project 11 125694356 125696059 + MGP_129S1SvImJ_P0034259 Uts2r protein_coding protein_coding MGP_129S1SvImJ_T0003202.1 MGP_129S1SvImJ_G0002973.1 mouse_genomes_project 11 59625577 59630613 - Gm12264 antisense antisense MGP_129S1SvImJ_T0029918.1 MGP_129S1SvImJ_G0018518.1 mouse_genomes_project 11 69500570 69511799 + MGP_129S1SvImJ_P0029918 Per1 protein_coding protein_coding MGP_129S1SvImJ_T0029919.1 MGP_129S1SvImJ_G0018518.1 mouse_genomes_project 11 69504281 69515302 + MGP_129S1SvImJ_P0029919 Per1 protein_coding protein_coding MGP_129S1SvImJ_T0029920.1 MGP_129S1SvImJ_G0018518.1 mouse_genomes_project 11 69505485 69506382 + MGP_129S1SvImJ_P0029920 Per1 protein_coding protein_coding MGP_129S1SvImJ_T0029921.1 MGP_129S1SvImJ_G0018518.1 mouse_genomes_project 11 69505491 69515290 + MGP_129S1SvImJ_P0029921 Per1 protein_coding protein_coding MGP_129S1SvImJ_T0029922.1 MGP_129S1SvImJ_G0018518.1 mouse_genomes_project 11 69505842 69511637 + MGP_129S1SvImJ_P0029922 Per1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029923.1 MGP_129S1SvImJ_G0018518.1 mouse_genomes_project 11 69505855 69515302 + MGP_129S1SvImJ_P0029923 Per1 protein_coding protein_coding MGP_129S1SvImJ_T0030851.1 MGP_129S1SvImJ_G0018742.1 mouse_genomes_project 11 77862015 77896705 + MGP_129S1SvImJ_P0030851 Slc6a4 protein_coding protein_coding MGP_129S1SvImJ_T0030852.1 MGP_129S1SvImJ_G0018742.1 mouse_genomes_project 11 77862028 77896706 + MGP_129S1SvImJ_P0030852 Slc6a4 protein_coding protein_coding MGP_129S1SvImJ_T0030853.1 MGP_129S1SvImJ_G0018742.1 mouse_genomes_project 11 77873062 77876834 + MGP_129S1SvImJ_P0030853 Slc6a4 protein_coding protein_coding MGP_129S1SvImJ_T0030854.1 MGP_129S1SvImJ_G0018742.1 mouse_genomes_project 11 77881938 77886002 + Slc6a4 protein_coding retained_intron MGP_129S1SvImJ_T0006289.1 MGP_129S1SvImJ_G0005255.1 mouse_genomes_project 11 72337731 72338801 - Gm12326 lincRNA lincRNA MGP_129S1SvImJ_T0006290.1 MGP_129S1SvImJ_G0005255.1 mouse_genomes_project 11 72338345 72338782 - Gm12326 lincRNA lincRNA MGP_129S1SvImJ_T0029337.1 MGP_129S1SvImJ_G0018391.1 mouse_genomes_project 11 59012460 59019760 + MGP_129S1SvImJ_P0029337 Mrpl55 protein_coding protein_coding MGP_129S1SvImJ_T0029338.1 MGP_129S1SvImJ_G0018391.1 mouse_genomes_project 11 59012463 59019721 + MGP_129S1SvImJ_P0029338 Mrpl55 protein_coding protein_coding MGP_129S1SvImJ_T0029339.1 MGP_129S1SvImJ_G0018391.1 mouse_genomes_project 11 59012466 59019967 + MGP_129S1SvImJ_P0029339 Mrpl55 protein_coding protein_coding MGP_129S1SvImJ_T0029340.1 MGP_129S1SvImJ_G0018391.1 mouse_genomes_project 11 59012479 59019835 + MGP_129S1SvImJ_P0029340 Mrpl55 protein_coding protein_coding MGP_129S1SvImJ_T0029341.1 MGP_129S1SvImJ_G0018391.1 mouse_genomes_project 11 59012512 59019721 + MGP_129S1SvImJ_P0029341 Mrpl55 protein_coding protein_coding MGP_129S1SvImJ_T0031475.1 MGP_129S1SvImJ_G0018895.1 mouse_genomes_project 11 88347418 88389779 - MGP_129S1SvImJ_P0031475 Dhx40 protein_coding protein_coding MGP_129S1SvImJ_T0031476.1 MGP_129S1SvImJ_G0018895.1 mouse_genomes_project 11 88353939 88383163 - MGP_129S1SvImJ_P0031476 Dhx40 protein_coding protein_coding MGP_129S1SvImJ_T0031477.1 MGP_129S1SvImJ_G0018895.1 mouse_genomes_project 11 88365705 88370393 - Dhx40 protein_coding processed_transcript MGP_129S1SvImJ_T0031478.1 MGP_129S1SvImJ_G0018895.1 mouse_genomes_project 11 88381903 88389072 - Dhx40 protein_coding processed_transcript MGP_129S1SvImJ_T0100491.1 MGP_129S1SvImJ_G0038558.1 mouse_genomes_project 11 27892447 27892587 + Gm22588 snoRNA snoRNA MGP_129S1SvImJ_T0029277.1 MGP_129S1SvImJ_G0018362.1 mouse_genomes_project 11 58294228 58298192 - MGP_129S1SvImJ_P0029277 Olfr328 protein_coding protein_coding MGP_129S1SvImJ_T0029278.1 MGP_129S1SvImJ_G0018362.1 mouse_genomes_project 11 58294228 58295123 - MGP_129S1SvImJ_P0029278 Olfr328 protein_coding protein_coding MGP_129S1SvImJ_T0029805.1 MGP_129S1SvImJ_G0018496.1 mouse_genomes_project 11 68177758 68240152 - MGP_129S1SvImJ_P0029805 Usp43 protein_coding protein_coding MGP_129S1SvImJ_T0029806.1 MGP_129S1SvImJ_G0018496.1 mouse_genomes_project 11 68177758 68240152 - MGP_129S1SvImJ_P0029806 Usp43 protein_coding protein_coding MGP_129S1SvImJ_T0029807.1 MGP_129S1SvImJ_G0018496.1 mouse_genomes_project 11 68178592 68193464 - Usp43 protein_coding retained_intron MGP_129S1SvImJ_T0029808.1 MGP_129S1SvImJ_G0018496.1 mouse_genomes_project 11 68214975 68239208 - Usp43 protein_coding processed_transcript MGP_129S1SvImJ_T0003158.1 MGP_129S1SvImJ_G0002933.1 mouse_genomes_project 11 32013177 32015192 + Gm12119 antisense antisense MGP_129S1SvImJ_T0100517.1 MGP_129S1SvImJ_G0038584.1 mouse_genomes_project 11 75621845 75621936 + Gm22771 snoRNA snoRNA MGP_129S1SvImJ_T0011329.1 MGP_129S1SvImJ_G0009445.1 mouse_genomes_project 11 90907202 90907464 - Gm24734 misc_RNA misc_RNA MGP_129S1SvImJ_T0029061.1 MGP_129S1SvImJ_G0018300.1 mouse_genomes_project 11 52998741 53012905 - Il4 protein_coding processed_transcript MGP_129S1SvImJ_T0029062.1 MGP_129S1SvImJ_G0018300.1 mouse_genomes_project 11 53008140 53014350 - MGP_129S1SvImJ_P0029062 Il4 protein_coding protein_coding MGP_129S1SvImJ_T0029063.1 MGP_129S1SvImJ_G0018300.1 mouse_genomes_project 11 53008140 53013019 - MGP_129S1SvImJ_P0029063 Il4 protein_coding protein_coding MGP_129S1SvImJ_T0029064.1 MGP_129S1SvImJ_G0018300.1 mouse_genomes_project 11 53008140 53014033 - MGP_129S1SvImJ_P0029064 Il4 protein_coding protein_coding MGP_129S1SvImJ_T0033926.1 MGP_129S1SvImJ_G0019477.1 mouse_genomes_project 11 123638132 123655506 + MGP_129S1SvImJ_P0033926 Gaa protein_coding protein_coding MGP_129S1SvImJ_T0033927.1 MGP_129S1SvImJ_G0019477.1 mouse_genomes_project 11 123638271 123655506 + MGP_129S1SvImJ_P0033927 Gaa protein_coding protein_coding MGP_129S1SvImJ_T0033928.1 MGP_129S1SvImJ_G0019477.1 mouse_genomes_project 11 123638273 123643698 + MGP_129S1SvImJ_P0033928 Gaa protein_coding protein_coding MGP_129S1SvImJ_T0033929.1 MGP_129S1SvImJ_G0019477.1 mouse_genomes_project 11 123640761 123645385 + Gaa protein_coding processed_transcript MGP_129S1SvImJ_T0033930.1 MGP_129S1SvImJ_G0019477.1 mouse_genomes_project 11 123644813 123648572 + MGP_129S1SvImJ_P0033930 Gaa protein_coding protein_coding MGP_129S1SvImJ_T0033931.1 MGP_129S1SvImJ_G0019477.1 mouse_genomes_project 11 123645101 123645866 + MGP_129S1SvImJ_P0033931 Gaa protein_coding protein_coding MGP_129S1SvImJ_T0033932.1 MGP_129S1SvImJ_G0019477.1 mouse_genomes_project 11 123647959 123651708 + MGP_129S1SvImJ_P0033932 Gaa protein_coding protein_coding MGP_129S1SvImJ_T0033933.1 MGP_129S1SvImJ_G0019477.1 mouse_genomes_project 11 123649121 123649734 + Gaa protein_coding processed_transcript MGP_129S1SvImJ_T0033002.1 MGP_129S1SvImJ_G0019285.1 mouse_genomes_project 11 108596035 108687238 - MGP_129S1SvImJ_P0033002 March10 protein_coding protein_coding MGP_129S1SvImJ_T0033003.1 MGP_129S1SvImJ_G0019285.1 mouse_genomes_project 11 108598981 108606749 - March10 protein_coding processed_transcript MGP_129S1SvImJ_T0033004.1 MGP_129S1SvImJ_G0019285.1 mouse_genomes_project 11 108631574 108645334 - MGP_129S1SvImJ_P0033004 March10 protein_coding protein_coding MGP_129S1SvImJ_T0033005.1 MGP_129S1SvImJ_G0019285.1 mouse_genomes_project 11 108636534 108689575 - MGP_129S1SvImJ_P0033005 March10 protein_coding protein_coding MGP_129S1SvImJ_T0030902.1 MGP_129S1SvImJ_G0018754.1 mouse_genomes_project 11 78659758 78664313 - Cryba1 protein_coding retained_intron MGP_129S1SvImJ_T0030903.1 MGP_129S1SvImJ_G0018754.1 mouse_genomes_project 11 78659770 78667762 - MGP_129S1SvImJ_P0030903 Cryba1 protein_coding protein_coding MGP_129S1SvImJ_T0003260.1 MGP_129S1SvImJ_G0003021.1 mouse_genomes_project 11 82593129 82610586 + 4930527B05Rik antisense antisense MGP_129S1SvImJ_T0029969.1 MGP_129S1SvImJ_G0018529.1 mouse_genomes_project 11 69788149 69794879 + MGP_129S1SvImJ_P0029969 Gm17305 protein_coding protein_coding MGP_129S1SvImJ_T0033907.1 MGP_129S1SvImJ_G0019471.1 mouse_genomes_project 11 123329282 123333920 + MGP_129S1SvImJ_P0033907 Enpp7 protein_coding protein_coding MGP_129S1SvImJ_T0033908.1 MGP_129S1SvImJ_G0019471.1 mouse_genomes_project 11 123329310 123333744 + MGP_129S1SvImJ_P0033908 Enpp7 protein_coding protein_coding MGP_129S1SvImJ_T0033460.1 MGP_129S1SvImJ_G0019390.1 mouse_genomes_project 11 119517436 119518832 - MGP_129S1SvImJ_P0033460 Nt5c protein_coding protein_coding MGP_129S1SvImJ_T0033461.1 MGP_129S1SvImJ_G0019390.1 mouse_genomes_project 11 119517436 119518879 - MGP_129S1SvImJ_P0033461 Nt5c protein_coding protein_coding MGP_129S1SvImJ_T0033462.1 MGP_129S1SvImJ_G0019390.1 mouse_genomes_project 11 119517654 119518868 - Nt5c protein_coding retained_intron MGP_129S1SvImJ_T0033463.1 MGP_129S1SvImJ_G0019390.1 mouse_genomes_project 11 119517716 119518219 - Nt5c protein_coding retained_intron MGP_129S1SvImJ_T0033464.1 MGP_129S1SvImJ_G0019390.1 mouse_genomes_project 11 119517787 119518388 - Nt5c protein_coding retained_intron MGP_129S1SvImJ_T0100495.1 MGP_129S1SvImJ_G0038562.1 mouse_genomes_project 11 47709304 47709423 + Gm24422 snoRNA snoRNA MGP_129S1SvImJ_T0031677.1 MGP_129S1SvImJ_G0018947.1 mouse_genomes_project 11 95977929 96001030 - MGP_129S1SvImJ_P0031677 Gm20390 protein_coding protein_coding MGP_129S1SvImJ_T0033647.1 MGP_129S1SvImJ_G0019419.1 mouse_genomes_project 11 120293264 120313242 + MGP_129S1SvImJ_P0033647 Ten1 protein_coding protein_coding MGP_129S1SvImJ_T0033648.1 MGP_129S1SvImJ_G0019419.1 mouse_genomes_project 11 120293307 120304783 + Ten1 protein_coding retained_intron MGP_129S1SvImJ_T0033649.1 MGP_129S1SvImJ_G0019419.1 mouse_genomes_project 11 120293368 120313172 + Ten1 protein_coding processed_transcript MGP_129S1SvImJ_T0033650.1 MGP_129S1SvImJ_G0019419.1 mouse_genomes_project 11 120308863 120313172 + Ten1 protein_coding processed_transcript MGP_129S1SvImJ_T0029858.1 MGP_129S1SvImJ_G0018508.1 mouse_genomes_project 11 69307380 69313555 - MGP_129S1SvImJ_P0029858 Odf4 protein_coding protein_coding MGP_129S1SvImJ_T0029859.1 MGP_129S1SvImJ_G0018508.1 mouse_genomes_project 11 69307381 69313587 - MGP_129S1SvImJ_P0029859 Odf4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029860.1 MGP_129S1SvImJ_G0018508.1 mouse_genomes_project 11 69307508 69313322 - MGP_129S1SvImJ_P0029860 Odf4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029861.1 MGP_129S1SvImJ_G0018508.1 mouse_genomes_project 11 69308364 69313580 - MGP_129S1SvImJ_P0029861 Odf4 protein_coding protein_coding MGP_129S1SvImJ_T0012728.1 MGP_129S1SvImJ_G0010817.1 mouse_genomes_project 11 93717552 93718501 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033844.1 MGP_129S1SvImJ_G0019458.1 mouse_genomes_project 11 122154861 122160391 - Tha1 protein_coding processed_transcript MGP_129S1SvImJ_T0033845.1 MGP_129S1SvImJ_G0019458.1 mouse_genomes_project 11 122154861 122160369 - MGP_129S1SvImJ_P0033845 Tha1 protein_coding protein_coding MGP_129S1SvImJ_T0033846.1 MGP_129S1SvImJ_G0019458.1 mouse_genomes_project 11 122156634 122158823 - Tha1 protein_coding processed_transcript MGP_129S1SvImJ_T0100540.1 MGP_129S1SvImJ_G0038607.1 mouse_genomes_project 11 109800903 109801036 + Gm22711 snoRNA snoRNA MGP_129S1SvImJ_T0009684.1 MGP_129S1SvImJ_G0007800.1 mouse_genomes_project 11 48917743 48917820 + Gm23813 miRNA miRNA MGP_129S1SvImJ_T0012553.1 MGP_129S1SvImJ_G0010642.1 mouse_genomes_project 11 26005219 26008302 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006270.1 MGP_129S1SvImJ_G0005240.1 mouse_genomes_project 11 63272647 63288593 + B430319H21Rik lincRNA lincRNA MGP_129S1SvImJ_T0032790.1 MGP_129S1SvImJ_G0019238.1 mouse_genomes_project 11 105454175 105537640 - MGP_129S1SvImJ_P0032790 Gpatch8 protein_coding protein_coding MGP_129S1SvImJ_T0032791.1 MGP_129S1SvImJ_G0019238.1 mouse_genomes_project 11 105455466 105486782 - Gpatch8 protein_coding processed_transcript MGP_129S1SvImJ_T0032792.1 MGP_129S1SvImJ_G0019238.1 mouse_genomes_project 11 105485828 105537640 - Gpatch8 protein_coding processed_transcript MGP_129S1SvImJ_T0032793.1 MGP_129S1SvImJ_G0019238.1 mouse_genomes_project 11 105486507 105537640 - Gpatch8 protein_coding processed_transcript MGP_129S1SvImJ_T0032794.1 MGP_129S1SvImJ_G0019238.1 mouse_genomes_project 11 105518016 105537617 - Gpatch8 protein_coding processed_transcript MGP_129S1SvImJ_T0032795.1 MGP_129S1SvImJ_G0019238.1 mouse_genomes_project 11 105518906 105537833 - Gpatch8 protein_coding processed_transcript MGP_129S1SvImJ_T0033528.1 MGP_129S1SvImJ_G0019400.1 mouse_genomes_project 11 119865849 119882284 - MGP_129S1SvImJ_P0033528 Caskin2 protein_coding protein_coding MGP_129S1SvImJ_T0033529.1 MGP_129S1SvImJ_G0019400.1 mouse_genomes_project 11 119866666 119867548 - Caskin2 protein_coding processed_transcript MGP_129S1SvImJ_T0033530.1 MGP_129S1SvImJ_G0019400.1 mouse_genomes_project 11 119873474 119876762 - MGP_129S1SvImJ_P0033530 Caskin2 protein_coding protein_coding MGP_129S1SvImJ_T0033531.1 MGP_129S1SvImJ_G0019400.1 mouse_genomes_project 11 119875436 119882293 - MGP_129S1SvImJ_P0033531 Caskin2 protein_coding protein_coding MGP_129S1SvImJ_T0033422.1 MGP_129S1SvImJ_G0019383.1 mouse_genomes_project 11 119402428 119416598 + MGP_129S1SvImJ_P0033422 Cdr2l protein_coding protein_coding MGP_129S1SvImJ_T0030128.1 MGP_129S1SvImJ_G0018569.1 mouse_genomes_project 11 70403651 70408034 - MGP_129S1SvImJ_P0030128 Eif5a protein_coding protein_coding MGP_129S1SvImJ_T0030129.1 MGP_129S1SvImJ_G0018569.1 mouse_genomes_project 11 70403657 70408335 - MGP_129S1SvImJ_P0030129 Eif5a protein_coding protein_coding MGP_129S1SvImJ_T0030130.1 MGP_129S1SvImJ_G0018569.1 mouse_genomes_project 11 70403657 70408335 - MGP_129S1SvImJ_P0030130 Eif5a protein_coding protein_coding MGP_129S1SvImJ_T0030131.1 MGP_129S1SvImJ_G0018569.1 mouse_genomes_project 11 70403657 70407579 - MGP_129S1SvImJ_P0030131 Eif5a protein_coding protein_coding MGP_129S1SvImJ_T0030132.1 MGP_129S1SvImJ_G0018569.1 mouse_genomes_project 11 70403657 70407889 - MGP_129S1SvImJ_P0030132 Eif5a protein_coding protein_coding MGP_129S1SvImJ_T0030133.1 MGP_129S1SvImJ_G0018569.1 mouse_genomes_project 11 70403657 70408335 - MGP_129S1SvImJ_P0030133 Eif5a protein_coding protein_coding MGP_129S1SvImJ_T0030134.1 MGP_129S1SvImJ_G0018569.1 mouse_genomes_project 11 70403657 70407889 - MGP_129S1SvImJ_P0030134 Eif5a protein_coding protein_coding MGP_129S1SvImJ_T0030135.1 MGP_129S1SvImJ_G0018569.1 mouse_genomes_project 11 70403657 70408904 - MGP_129S1SvImJ_P0030135 Eif5a protein_coding protein_coding MGP_129S1SvImJ_T0030136.1 MGP_129S1SvImJ_G0018569.1 mouse_genomes_project 11 70403968 70408013 - MGP_129S1SvImJ_P0030136 Eif5a protein_coding protein_coding MGP_129S1SvImJ_T0030137.1 MGP_129S1SvImJ_G0018569.1 mouse_genomes_project 11 70404024 70408013 - MGP_129S1SvImJ_P0030137 Eif5a protein_coding protein_coding MGP_129S1SvImJ_T0030138.1 MGP_129S1SvImJ_G0018569.1 mouse_genomes_project 11 70404034 70408139 - MGP_129S1SvImJ_P0030138 Eif5a protein_coding protein_coding MGP_129S1SvImJ_T0030139.1 MGP_129S1SvImJ_G0018569.1 mouse_genomes_project 11 70404119 70405243 - MGP_129S1SvImJ_P0030139 Eif5a protein_coding protein_coding MGP_129S1SvImJ_T0030140.1 MGP_129S1SvImJ_G0018569.1 mouse_genomes_project 11 70404395 70407868 - MGP_129S1SvImJ_P0030140 Eif5a protein_coding protein_coding MGP_129S1SvImJ_T0033282.1 MGP_129S1SvImJ_G0019349.1 mouse_genomes_project 11 117039625 117388292 - MGP_129S1SvImJ_P0033282 Slc39a11 protein_coding protein_coding MGP_129S1SvImJ_T0033283.1 MGP_129S1SvImJ_G0019349.1 mouse_genomes_project 11 117039625 117388280 - MGP_129S1SvImJ_P0033283 Slc39a11 protein_coding protein_coding MGP_129S1SvImJ_T0033284.1 MGP_129S1SvImJ_G0019349.1 mouse_genomes_project 11 117039625 117388283 - MGP_129S1SvImJ_P0033284 Slc39a11 protein_coding protein_coding MGP_129S1SvImJ_T0033285.1 MGP_129S1SvImJ_G0019349.1 mouse_genomes_project 11 117174859 117478936 - MGP_129S1SvImJ_P0033285 Slc39a11 protein_coding protein_coding MGP_129S1SvImJ_T0033286.1 MGP_129S1SvImJ_G0019349.1 mouse_genomes_project 11 117276195 117388303 - MGP_129S1SvImJ_P0033286 Slc39a11 protein_coding protein_coding MGP_129S1SvImJ_T0033287.1 MGP_129S1SvImJ_G0019349.1 mouse_genomes_project 11 117340893 117478944 - MGP_129S1SvImJ_P0033287 Slc39a11 protein_coding protein_coding MGP_129S1SvImJ_T0033288.1 MGP_129S1SvImJ_G0019349.1 mouse_genomes_project 11 117380358 117478935 - MGP_129S1SvImJ_P0033288 Slc39a11 protein_coding protein_coding MGP_129S1SvImJ_T0033289.1 MGP_129S1SvImJ_G0019349.1 mouse_genomes_project 11 117400082 117478935 - Slc39a11 protein_coding processed_transcript MGP_129S1SvImJ_T0102152.1 MGP_129S1SvImJ_G0039987.1 mouse_genomes_project 11 96886294 96887085 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0027945.1 MGP_129S1SvImJ_G0018013.1 mouse_genomes_project 11 3050206 3062296 + MGP_129S1SvImJ_P0027945 Ykt6 protein_coding protein_coding MGP_129S1SvImJ_T0027946.1 MGP_129S1SvImJ_G0018013.1 mouse_genomes_project 11 3053817 3057717 + Ykt6 protein_coding processed_transcript MGP_129S1SvImJ_T0100512.1 MGP_129S1SvImJ_G0038579.1 mouse_genomes_project 11 70128648 70128792 - Gm22988 snoRNA snoRNA MGP_129S1SvImJ_T0031854.1 MGP_129S1SvImJ_G0018990.1 mouse_genomes_project 11 98067767 98081342 - MGP_129S1SvImJ_P0031854 Abi3 protein_coding protein_coding MGP_129S1SvImJ_T0031856.1 MGP_129S1SvImJ_G0018990.1 mouse_genomes_project 11 98070899 98081409 - Abi3 protein_coding processed_transcript MGP_129S1SvImJ_T0031857.1 MGP_129S1SvImJ_G0018990.1 mouse_genomes_project 11 98071679 98074825 - MGP_129S1SvImJ_P0031857 Abi3 protein_coding protein_coding MGP_129S1SvImJ_T0031858.1 MGP_129S1SvImJ_G0018990.1 mouse_genomes_project 11 98076011 98081031 - Abi3 protein_coding processed_transcript MGP_129S1SvImJ_T0098819.1 MGP_129S1SvImJ_G0036901.1 mouse_genomes_project 11 123540177 123540741 - Gm11753 sense_intronic sense_intronic MGP_129S1SvImJ_T0017293.1 MGP_129S1SvImJ_G0015214.1 mouse_genomes_project 11 108598143 108625482 + Gm11638 processed_transcript processed_transcript MGP_129S1SvImJ_T0017214.1 MGP_129S1SvImJ_G0015167.1 mouse_genomes_project 11 44685655 44722656 + F630206G17Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0034261.1 MGP_129S1SvImJ_G0019542.1 mouse_genomes_project 11 125742933 125759102 + MGP_129S1SvImJ_P0034261 Hexdc protein_coding protein_coding MGP_129S1SvImJ_T0034262.1 MGP_129S1SvImJ_G0019542.1 mouse_genomes_project 11 125742935 125759094 + MGP_129S1SvImJ_P0034262 Hexdc protein_coding protein_coding MGP_129S1SvImJ_T0034263.1 MGP_129S1SvImJ_G0019542.1 mouse_genomes_project 11 125743275 125756339 + Hexdc protein_coding processed_transcript MGP_129S1SvImJ_T0034264.1 MGP_129S1SvImJ_G0019542.1 mouse_genomes_project 11 125743301 125751882 + Hexdc protein_coding processed_transcript MGP_129S1SvImJ_T0034265.1 MGP_129S1SvImJ_G0019542.1 mouse_genomes_project 11 125744522 125759094 + MGP_129S1SvImJ_P0034265 Hexdc protein_coding protein_coding MGP_129S1SvImJ_T0034266.1 MGP_129S1SvImJ_G0019542.1 mouse_genomes_project 11 125748869 125757476 + MGP_129S1SvImJ_P0034266 Hexdc protein_coding protein_coding MGP_129S1SvImJ_T0009775.1 MGP_129S1SvImJ_G0007891.1 mouse_genomes_project 11 119258774 119258882 + Gm25837 miRNA miRNA MGP_129S1SvImJ_T0003181.1 MGP_129S1SvImJ_G0002955.1 mouse_genomes_project 11 52468692 52477127 - Gm11186 antisense antisense MGP_129S1SvImJ_T0012568.1 MGP_129S1SvImJ_G0010657.1 mouse_genomes_project 11 29124929 29125533 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034226.1 MGP_129S1SvImJ_G0019533.1 mouse_genomes_project 11 125462326 125474426 + MGP_129S1SvImJ_P0034226 Slc16a3 protein_coding protein_coding MGP_129S1SvImJ_T0034227.1 MGP_129S1SvImJ_G0019533.1 mouse_genomes_project 11 125462899 125472398 + MGP_129S1SvImJ_P0034227 Slc16a3 protein_coding protein_coding MGP_129S1SvImJ_T0034228.1 MGP_129S1SvImJ_G0019533.1 mouse_genomes_project 11 125462913 125474651 + MGP_129S1SvImJ_P0034228 Slc16a3 protein_coding protein_coding MGP_129S1SvImJ_T0034229.1 MGP_129S1SvImJ_G0019533.1 mouse_genomes_project 11 125462917 125472512 + MGP_129S1SvImJ_P0034229 Slc16a3 protein_coding protein_coding MGP_129S1SvImJ_T0034230.1 MGP_129S1SvImJ_G0019533.1 mouse_genomes_project 11 125462927 125476514 + MGP_129S1SvImJ_P0034230 Slc16a3 protein_coding protein_coding MGP_129S1SvImJ_T0034231.1 MGP_129S1SvImJ_G0019533.1 mouse_genomes_project 11 125464534 125470924 + MGP_129S1SvImJ_P0034231 Slc16a3 protein_coding protein_coding MGP_129S1SvImJ_T0034232.1 MGP_129S1SvImJ_G0019533.1 mouse_genomes_project 11 125464984 125469863 + Slc16a3 protein_coding processed_transcript MGP_129S1SvImJ_T0034233.1 MGP_129S1SvImJ_G0019533.1 mouse_genomes_project 11 125470876 125471882 + Slc16a3 protein_coding retained_intron MGP_129S1SvImJ_T0032242.1 MGP_129S1SvImJ_G0019083.1 mouse_genomes_project 11 101787623 101800058 - MGP_129S1SvImJ_P0032242 Ccr7 protein_coding protein_coding MGP_129S1SvImJ_T0017286.1 MGP_129S1SvImJ_G0015208.1 mouse_genomes_project 11 103109597 103110791 - Gm20394 processed_transcript processed_transcript MGP_129S1SvImJ_T0028684.1 MGP_129S1SvImJ_G0018191.1 mouse_genomes_project 11 45143182 45147526 + MGP_129S1SvImJ_P0028684 Fndc9 protein_coding protein_coding MGP_129S1SvImJ_T0034000.1 MGP_129S1SvImJ_G0019489.1 mouse_genomes_project 11 124497553 124521592 - MGP_129S1SvImJ_P0034000 Cep131 protein_coding protein_coding MGP_129S1SvImJ_T0034001.1 MGP_129S1SvImJ_G0019489.1 mouse_genomes_project 11 124497557 124498092 - Cep131 protein_coding processed_transcript MGP_129S1SvImJ_T0034002.1 MGP_129S1SvImJ_G0019489.1 mouse_genomes_project 11 124497762 124501181 - Cep131 protein_coding processed_transcript MGP_129S1SvImJ_T0034003.1 MGP_129S1SvImJ_G0019489.1 mouse_genomes_project 11 124500252 124504029 - Cep131 protein_coding processed_transcript MGP_129S1SvImJ_T0034004.1 MGP_129S1SvImJ_G0019489.1 mouse_genomes_project 11 124501212 124505144 - Cep131 protein_coding processed_transcript MGP_129S1SvImJ_T0003313.1 MGP_129S1SvImJ_G0003058.1 mouse_genomes_project 11 102798558 102833146 + Gm11571 antisense antisense MGP_129S1SvImJ_T0033257.1 MGP_129S1SvImJ_G0019342.1 mouse_genomes_project 11 113708099 113781831 - MGP_129S1SvImJ_P0033257 Abca9 protein_coding protein_coding MGP_129S1SvImJ_T0033258.1 MGP_129S1SvImJ_G0019342.1 mouse_genomes_project 11 113766300 113781690 - Abca9 protein_coding processed_transcript MGP_129S1SvImJ_T0032422.1 MGP_129S1SvImJ_G0019170.1 mouse_genomes_project 11 103539345 103544271 - MGP_129S1SvImJ_P0032422 Ghdc protein_coding protein_coding MGP_129S1SvImJ_T0032423.1 MGP_129S1SvImJ_G0019170.1 mouse_genomes_project 11 103540124 103542027 - Ghdc protein_coding processed_transcript MGP_129S1SvImJ_T0032424.1 MGP_129S1SvImJ_G0019170.1 mouse_genomes_project 11 103543005 103544256 - MGP_129S1SvImJ_P0032424 Ghdc protein_coding protein_coding MGP_129S1SvImJ_T0003203.1 MGP_129S1SvImJ_G0002974.1 mouse_genomes_project 11 59660336 59668716 + Gm16062 antisense antisense MGP_129S1SvImJ_T0009682.1 MGP_129S1SvImJ_G0007798.1 mouse_genomes_project 11 45002428 45002549 + Mir8100 miRNA miRNA MGP_129S1SvImJ_T0101609.1 MGP_129S1SvImJ_G0039657.1 mouse_genomes_project 11 3801686 3811662 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101610.1 MGP_129S1SvImJ_G0039657.1 mouse_genomes_project 11 3801912 3802378 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101611.1 MGP_129S1SvImJ_G0039657.1 mouse_genomes_project 11 3802682 3810165 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101612.1 MGP_129S1SvImJ_G0039657.1 mouse_genomes_project 11 3802955 3811639 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0003321.1 MGP_129S1SvImJ_G0003066.1 mouse_genomes_project 11 104892752 104900905 + 4930417O22Rik antisense antisense MGP_129S1SvImJ_T0006328.1 MGP_129S1SvImJ_G0005280.1 mouse_genomes_project 11 90479008 90482078 - Gm11493 lincRNA lincRNA MGP_129S1SvImJ_T0028036.1 MGP_129S1SvImJ_G0018033.1 mouse_genomes_project 11 4398226 4402943 + MGP_129S1SvImJ_P0028036 Igfbp1 protein_coding protein_coding MGP_129S1SvImJ_T0031808.1 MGP_129S1SvImJ_G0018977.1 mouse_genomes_project 11 97306618 97311796 + MGP_129S1SvImJ_P0031808 Dlx3 protein_coding protein_coding MGP_129S1SvImJ_T0030437.1 MGP_129S1SvImJ_G0018624.1 mouse_genomes_project 11 71660002 71839299 - MGP_129S1SvImJ_P0030437 Nlrp1a protein_coding protein_coding MGP_129S1SvImJ_T0030438.1 MGP_129S1SvImJ_G0018624.1 mouse_genomes_project 11 71660002 71707848 - MGP_129S1SvImJ_P0030438 Nlrp1a protein_coding protein_coding MGP_129S1SvImJ_T0030597.1 MGP_129S1SvImJ_G0018676.1 mouse_genomes_project 11 74537062 74538001 - MGP_129S1SvImJ_P0030597 Olfr393 protein_coding protein_coding MGP_129S1SvImJ_T0012539.1 MGP_129S1SvImJ_G0010628.1 mouse_genomes_project 11 20307555 20307845 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031775.1 MGP_129S1SvImJ_G0018967.1 mouse_genomes_project 11 96810545 96822211 - MGP_129S1SvImJ_P0031775 Gm11541 protein_coding protein_coding MGP_129S1SvImJ_T0032108.1 MGP_129S1SvImJ_G0019052.1 mouse_genomes_project 11 100724426 100779582 + MGP_129S1SvImJ_P0032108 Cdk12 protein_coding protein_coding MGP_129S1SvImJ_T0032109.1 MGP_129S1SvImJ_G0019052.1 mouse_genomes_project 11 100724681 100774740 + MGP_129S1SvImJ_P0032109 Cdk12 protein_coding protein_coding MGP_129S1SvImJ_T0032110.1 MGP_129S1SvImJ_G0019052.1 mouse_genomes_project 11 100724702 100779065 + MGP_129S1SvImJ_P0032110 Cdk12 protein_coding protein_coding MGP_129S1SvImJ_T0032111.1 MGP_129S1SvImJ_G0019052.1 mouse_genomes_project 11 100748377 100753662 + Cdk12 protein_coding processed_transcript MGP_129S1SvImJ_T0032112.1 MGP_129S1SvImJ_G0019052.1 mouse_genomes_project 11 100769671 100807018 + Cdk12 protein_coding processed_transcript MGP_129S1SvImJ_T0032113.1 MGP_129S1SvImJ_G0019052.1 mouse_genomes_project 11 100791844 100796547 + Cdk12 protein_coding processed_transcript MGP_129S1SvImJ_T0099222.1 MGP_129S1SvImJ_G0037289.1 mouse_genomes_project 11 9369553 9369709 - Gm24036 snRNA snRNA MGP_129S1SvImJ_T0006312.1 MGP_129S1SvImJ_G0005270.1 mouse_genomes_project 11 85203864 85236846 - Gm12576 lincRNA lincRNA MGP_129S1SvImJ_T0031910.1 MGP_129S1SvImJ_G0019010.1 mouse_genomes_project 11 98791584 99105332 + MGP_129S1SvImJ_P0031910 Skap1 protein_coding protein_coding MGP_129S1SvImJ_T0031911.1 MGP_129S1SvImJ_G0019010.1 mouse_genomes_project 11 98791584 99105143 + MGP_129S1SvImJ_P0031911 Skap1 protein_coding protein_coding MGP_129S1SvImJ_T0031912.1 MGP_129S1SvImJ_G0019010.1 mouse_genomes_project 11 98791591 98823249 + MGP_129S1SvImJ_P0031912 Skap1 protein_coding protein_coding MGP_129S1SvImJ_T0031913.1 MGP_129S1SvImJ_G0019010.1 mouse_genomes_project 11 98791615 99075677 + Skap1 protein_coding retained_intron MGP_129S1SvImJ_T0031914.1 MGP_129S1SvImJ_G0019010.1 mouse_genomes_project 11 98791618 99105143 + MGP_129S1SvImJ_P0031914 Skap1 protein_coding protein_coding MGP_129S1SvImJ_T0031915.1 MGP_129S1SvImJ_G0019010.1 mouse_genomes_project 11 98791624 98917554 + MGP_129S1SvImJ_P0031915 Skap1 protein_coding protein_coding MGP_129S1SvImJ_T0031916.1 MGP_129S1SvImJ_G0019010.1 mouse_genomes_project 11 98791672 99015998 + MGP_129S1SvImJ_P0031916 Skap1 protein_coding protein_coding MGP_129S1SvImJ_T0031917.1 MGP_129S1SvImJ_G0019010.1 mouse_genomes_project 11 98813314 98823249 + Skap1 protein_coding processed_transcript MGP_129S1SvImJ_T0031918.1 MGP_129S1SvImJ_G0019010.1 mouse_genomes_project 11 98819389 99046430 + Skap1 protein_coding retained_intron MGP_129S1SvImJ_T0031919.1 MGP_129S1SvImJ_G0019010.1 mouse_genomes_project 11 99050233 99055200 + Skap1 protein_coding retained_intron MGP_129S1SvImJ_T0028711.1 MGP_129S1SvImJ_G0018200.1 mouse_genomes_project 11 45674722 45705148 + MGP_129S1SvImJ_P0028711 Havcr1 protein_coding protein_coding MGP_129S1SvImJ_T0028712.1 MGP_129S1SvImJ_G0018200.1 mouse_genomes_project 11 45681194 45724763 + MGP_129S1SvImJ_P0028712 Havcr1 protein_coding protein_coding MGP_129S1SvImJ_T0028713.1 MGP_129S1SvImJ_G0018200.1 mouse_genomes_project 11 45693169 45724761 + MGP_129S1SvImJ_P0028713 Havcr1 protein_coding protein_coding MGP_129S1SvImJ_T0028714.1 MGP_129S1SvImJ_G0018200.1 mouse_genomes_project 11 45693823 45724763 + MGP_129S1SvImJ_P0028714 Havcr1 protein_coding protein_coding MGP_129S1SvImJ_T0031785.1 MGP_129S1SvImJ_G0018971.1 mouse_genomes_project 11 97145887 97159472 - MGP_129S1SvImJ_P0031785 Sgca protein_coding protein_coding MGP_129S1SvImJ_T0031786.1 MGP_129S1SvImJ_G0018971.1 mouse_genomes_project 11 97145893 97153821 - MGP_129S1SvImJ_P0031786 Sgca protein_coding protein_coding MGP_129S1SvImJ_T0031787.1 MGP_129S1SvImJ_G0018971.1 mouse_genomes_project 11 97145918 97156608 - MGP_129S1SvImJ_P0031787 Sgca protein_coding protein_coding MGP_129S1SvImJ_T0031788.1 MGP_129S1SvImJ_G0018971.1 mouse_genomes_project 11 97146304 97159472 - MGP_129S1SvImJ_P0031788 Sgca protein_coding protein_coding MGP_129S1SvImJ_T0031790.1 MGP_129S1SvImJ_G0018971.1 mouse_genomes_project 11 97155370 97156634 - MGP_129S1SvImJ_P0031790 Sgca protein_coding protein_coding MGP_129S1SvImJ_T0029283.1 MGP_129S1SvImJ_G0018365.1 mouse_genomes_project 11 58367218 58368190 - MGP_129S1SvImJ_P0029283 Olfr323 protein_coding protein_coding MGP_129S1SvImJ_T0029284.1 MGP_129S1SvImJ_G0018365.1 mouse_genomes_project 11 58367218 58368187 - MGP_129S1SvImJ_P0029284 Olfr323 protein_coding protein_coding MGP_129S1SvImJ_T0028795.1 MGP_129S1SvImJ_G0018228.1 mouse_genomes_project 11 48546834 48547770 + MGP_129S1SvImJ_P0028795 Olfr1388 protein_coding protein_coding MGP_129S1SvImJ_T0100470.1 MGP_129S1SvImJ_G0038537.1 mouse_genomes_project 11 344295 344412 - Gm24439 snoRNA snoRNA MGP_129S1SvImJ_T0012689.1 MGP_129S1SvImJ_G0010778.1 mouse_genomes_project 11 77351910 77354383 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006389.1 MGP_129S1SvImJ_G0005324.1 mouse_genomes_project 11 121652670 121653650 + Gm11729 lincRNA lincRNA MGP_129S1SvImJ_T0003197.1 MGP_129S1SvImJ_G0002969.1 mouse_genomes_project 11 58668454 58670293 + Gm12256 antisense antisense MGP_129S1SvImJ_T0100481.1 MGP_129S1SvImJ_G0038548.1 mouse_genomes_project 11 10008937 10009067 + Gm22789 snoRNA snoRNA MGP_129S1SvImJ_T0012721.1 MGP_129S1SvImJ_G0010810.1 mouse_genomes_project 11 89589276 89589449 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033834.1 MGP_129S1SvImJ_G0019455.1 mouse_genomes_project 11 122108164 122124027 + MGP_129S1SvImJ_P0033834 Afmid protein_coding protein_coding MGP_129S1SvImJ_T0033835.1 MGP_129S1SvImJ_G0019455.1 mouse_genomes_project 11 122108214 122121357 + MGP_129S1SvImJ_P0033835 Afmid protein_coding protein_coding MGP_129S1SvImJ_T0033836.1 MGP_129S1SvImJ_G0019455.1 mouse_genomes_project 11 122108221 122114887 + Afmid protein_coding retained_intron MGP_129S1SvImJ_T0033837.1 MGP_129S1SvImJ_G0019455.1 mouse_genomes_project 11 122114340 122119540 + Afmid protein_coding retained_intron MGP_129S1SvImJ_T0033838.1 MGP_129S1SvImJ_G0019455.1 mouse_genomes_project 11 122114466 122121354 + Afmid protein_coding retained_intron MGP_129S1SvImJ_T0033839.1 MGP_129S1SvImJ_G0019455.1 mouse_genomes_project 11 122114509 122119647 + Afmid protein_coding retained_intron MGP_129S1SvImJ_T0031228.1 MGP_129S1SvImJ_G0018832.1 mouse_genomes_project 11 84158390 84173465 - MGP_129S1SvImJ_P0031228 Rad51d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031229.1 MGP_129S1SvImJ_G0018832.1 mouse_genomes_project 11 84158655 84173490 - MGP_129S1SvImJ_P0031229 Rad51d protein_coding protein_coding MGP_129S1SvImJ_T0031230.1 MGP_129S1SvImJ_G0018832.1 mouse_genomes_project 11 84160690 84173465 - MGP_129S1SvImJ_P0031230 Rad51d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031231.1 MGP_129S1SvImJ_G0018832.1 mouse_genomes_project 11 84160690 84173465 - MGP_129S1SvImJ_P0031231 Rad51d protein_coding protein_coding MGP_129S1SvImJ_T0031232.1 MGP_129S1SvImJ_G0018832.1 mouse_genomes_project 11 84160690 84173465 - MGP_129S1SvImJ_P0031232 Rad51d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031233.1 MGP_129S1SvImJ_G0018832.1 mouse_genomes_project 11 84160690 84173465 - MGP_129S1SvImJ_P0031233 Rad51d protein_coding protein_coding MGP_129S1SvImJ_T0012569.1 MGP_129S1SvImJ_G0010658.1 mouse_genomes_project 11 29241030 29241809 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034242.1 MGP_129S1SvImJ_G0019535.1 mouse_genomes_project 11 125566903 125569575 - MGP_129S1SvImJ_P0034242 Cd7 protein_coding protein_coding MGP_129S1SvImJ_T0034243.1 MGP_129S1SvImJ_G0019535.1 mouse_genomes_project 11 125568041 125569575 - Cd7 protein_coding retained_intron MGP_129S1SvImJ_T0099255.1 MGP_129S1SvImJ_G0037322.1 mouse_genomes_project 11 74449703 74449810 + Gm22381 snRNA snRNA MGP_129S1SvImJ_T0032920.1 MGP_129S1SvImJ_G0019268.1 mouse_genomes_project 11 106831312 106853795 - MGP_129S1SvImJ_P0032920 Wnt9b protein_coding protein_coding MGP_129S1SvImJ_T0033934.1 MGP_129S1SvImJ_G0019478.1 mouse_genomes_project 11 123660965 123679822 - MGP_129S1SvImJ_P0033934 Eif4a3 protein_coding protein_coding MGP_129S1SvImJ_T0033935.1 MGP_129S1SvImJ_G0019478.1 mouse_genomes_project 11 123660966 123661679 - Eif4a3 protein_coding processed_transcript MGP_129S1SvImJ_T0033936.1 MGP_129S1SvImJ_G0019478.1 mouse_genomes_project 11 123660966 123661613 - Eif4a3 protein_coding processed_transcript MGP_129S1SvImJ_T0033937.1 MGP_129S1SvImJ_G0019478.1 mouse_genomes_project 11 123672265 123673338 - Eif4a3 protein_coding processed_transcript MGP_129S1SvImJ_T0033938.1 MGP_129S1SvImJ_G0019478.1 mouse_genomes_project 11 123672606 123679747 - MGP_129S1SvImJ_P0033938 Eif4a3 protein_coding protein_coding MGP_129S1SvImJ_T0033939.1 MGP_129S1SvImJ_G0019478.1 mouse_genomes_project 11 123677433 123679751 - Eif4a3 protein_coding processed_transcript MGP_129S1SvImJ_T0029261.1 MGP_129S1SvImJ_G0018352.1 mouse_genomes_project 11 58153975 58158888 + MGP_129S1SvImJ_P0029261 1810065E05Rik protein_coding protein_coding MGP_129S1SvImJ_T0098303.1 MGP_129S1SvImJ_G0036388.1 mouse_genomes_project 11 125107738 125108236 - pseudogene pseudogene MGP_129S1SvImJ_T0031182.1 MGP_129S1SvImJ_G0018814.1 mouse_genomes_project 11 81643947 81648109 + MGP_129S1SvImJ_P0031182 Cdk5r1 protein_coding protein_coding MGP_129S1SvImJ_T0031183.1 MGP_129S1SvImJ_G0018814.1 mouse_genomes_project 11 81643980 81644848 + MGP_129S1SvImJ_P0031183 Cdk5r1 protein_coding protein_coding MGP_129S1SvImJ_T0029660.1 MGP_129S1SvImJ_G0018456.1 mouse_genomes_project 11 62598381 62600573 + MGP_129S1SvImJ_P0029660 protein_coding protein_coding MGP_129S1SvImJ_T0028067.1 MGP_129S1SvImJ_G0018042.1 mouse_genomes_project 11 8394218 8545746 + MGP_129S1SvImJ_P0028067 Vwc2 protein_coding protein_coding MGP_129S1SvImJ_T0028068.1 MGP_129S1SvImJ_G0018042.1 mouse_genomes_project 11 8394739 8551149 + MGP_129S1SvImJ_P0028068 Vwc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028069.1 MGP_129S1SvImJ_G0018042.1 mouse_genomes_project 11 8395846 8548856 + MGP_129S1SvImJ_P0028069 Vwc2 protein_coding protein_coding MGP_129S1SvImJ_T0028070.1 MGP_129S1SvImJ_G0018042.1 mouse_genomes_project 11 8396480 8410178 + Vwc2 protein_coding processed_transcript MGP_129S1SvImJ_T0031908.1 MGP_129S1SvImJ_G0019009.1 mouse_genomes_project 11 98678848 98681298 + MGP_129S1SvImJ_P0031908 Hoxb1 protein_coding protein_coding MGP_129S1SvImJ_T0031909.1 MGP_129S1SvImJ_G0019009.1 mouse_genomes_project 11 98679354 98680318 + Hoxb1 protein_coding processed_transcript MGP_129S1SvImJ_T0032486.1 MGP_129S1SvImJ_G0019184.1 mouse_genomes_project 11 103990346 103998645 - MGP_129S1SvImJ_P0032486 Plekhh3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032487.1 MGP_129S1SvImJ_G0019184.1 mouse_genomes_project 11 103990346 103999041 - MGP_129S1SvImJ_P0032487 Plekhh3 protein_coding protein_coding MGP_129S1SvImJ_T0032488.1 MGP_129S1SvImJ_G0019184.1 mouse_genomes_project 11 103990346 103993288 - MGP_129S1SvImJ_P0032488 Plekhh3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032489.1 MGP_129S1SvImJ_G0019184.1 mouse_genomes_project 11 103990349 103999007 - MGP_129S1SvImJ_P0032489 Plekhh3 protein_coding protein_coding MGP_129S1SvImJ_T0032490.1 MGP_129S1SvImJ_G0019184.1 mouse_genomes_project 11 103991834 103992992 - Plekhh3 protein_coding processed_transcript MGP_129S1SvImJ_T0032491.1 MGP_129S1SvImJ_G0019184.1 mouse_genomes_project 11 103995161 103998044 - MGP_129S1SvImJ_P0032491 Plekhh3 protein_coding protein_coding MGP_129S1SvImJ_T0012706.1 MGP_129S1SvImJ_G0010795.1 mouse_genomes_project 11 82242094 82244072 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029371.1 MGP_129S1SvImJ_G0018403.1 mouse_genomes_project 11 59435637 59436748 - MGP_129S1SvImJ_P0029371 Olfr223 protein_coding protein_coding MGP_129S1SvImJ_T0003387.1 MGP_129S1SvImJ_G0003118.1 mouse_genomes_project 11 125127908 125138004 + Myadml2os antisense antisense MGP_129S1SvImJ_T0100520.1 MGP_129S1SvImJ_G0038587.1 mouse_genomes_project 11 78588355 78588487 - Gm23132 snoRNA snoRNA MGP_129S1SvImJ_T0030776.1 MGP_129S1SvImJ_G0018726.1 mouse_genomes_project 11 76814866 76823455 - MGP_129S1SvImJ_P0030776 Fam101b protein_coding protein_coding MGP_129S1SvImJ_T0003332.1 MGP_129S1SvImJ_G0003077.1 mouse_genomes_project 11 108396281 108401631 - 1700052K11Rik antisense antisense MGP_129S1SvImJ_T0028948.1 MGP_129S1SvImJ_G0018270.1 mouse_genomes_project 11 50868678 50873752 + MGP_129S1SvImJ_P0028948 Nhp2 protein_coding protein_coding MGP_129S1SvImJ_T0028949.1 MGP_129S1SvImJ_G0018270.1 mouse_genomes_project 11 50868714 50873467 + Nhp2 protein_coding retained_intron MGP_129S1SvImJ_T0006227.1 MGP_129S1SvImJ_G0005200.1 mouse_genomes_project 11 29985043 29990598 + Gm12107 lincRNA lincRNA MGP_129S1SvImJ_T0098449.1 MGP_129S1SvImJ_G0036534.1 mouse_genomes_project 11 57394056 57394175 + n-R5s69 rRNA rRNA MGP_129S1SvImJ_T0030645.1 MGP_129S1SvImJ_G0018698.1 mouse_genomes_project 11 75482014 75532238 + MGP_129S1SvImJ_P0030645 Mettl16 protein_coding protein_coding MGP_129S1SvImJ_T0030646.1 MGP_129S1SvImJ_G0018698.1 mouse_genomes_project 11 75482014 75542851 + MGP_129S1SvImJ_P0030646 Mettl16 protein_coding protein_coding MGP_129S1SvImJ_T0030647.1 MGP_129S1SvImJ_G0018698.1 mouse_genomes_project 11 75482100 75484806 + MGP_129S1SvImJ_P0030647 Mettl16 protein_coding protein_coding MGP_129S1SvImJ_T0030648.1 MGP_129S1SvImJ_G0018698.1 mouse_genomes_project 11 75482109 75532238 + MGP_129S1SvImJ_P0030648 Mettl16 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030649.1 MGP_129S1SvImJ_G0018698.1 mouse_genomes_project 11 75517703 75531290 + Mettl16 protein_coding retained_intron MGP_129S1SvImJ_T0030650.1 MGP_129S1SvImJ_G0018698.1 mouse_genomes_project 11 75522962 75531855 + Mettl16 protein_coding processed_transcript MGP_129S1SvImJ_T0003357.1 MGP_129S1SvImJ_G0003097.1 mouse_genomes_project 11 118042412 118045266 - antisense antisense MGP_129S1SvImJ_T0003358.1 MGP_129S1SvImJ_G0003097.1 mouse_genomes_project 11 118044461 118045163 - antisense antisense MGP_129S1SvImJ_T0099272.1 MGP_129S1SvImJ_G0037339.1 mouse_genomes_project 11 89055171 89055278 - Gm23137 snRNA snRNA MGP_129S1SvImJ_T0034276.1 MGP_129S1SvImJ_G0019544.1 mouse_genomes_project 11 125774113 125793789 + MGP_129S1SvImJ_P0034276 Narf protein_coding protein_coding MGP_129S1SvImJ_T0034277.1 MGP_129S1SvImJ_G0019544.1 mouse_genomes_project 11 125781388 125782299 + Narf protein_coding retained_intron MGP_129S1SvImJ_T0034278.1 MGP_129S1SvImJ_G0019544.1 mouse_genomes_project 11 125781870 125782662 + Narf protein_coding retained_intron MGP_129S1SvImJ_T0028830.1 MGP_129S1SvImJ_G0018241.1 mouse_genomes_project 11 49290036 49333210 + MGP_129S1SvImJ_P0028830 Tbc1d9b protein_coding protein_coding MGP_129S1SvImJ_T0028831.1 MGP_129S1SvImJ_G0018241.1 mouse_genomes_project 11 49290036 49333965 + MGP_129S1SvImJ_P0028831 Tbc1d9b protein_coding protein_coding MGP_129S1SvImJ_T0028832.1 MGP_129S1SvImJ_G0018241.1 mouse_genomes_project 11 49290042 49299149 + Tbc1d9b protein_coding processed_transcript MGP_129S1SvImJ_T0028833.1 MGP_129S1SvImJ_G0018241.1 mouse_genomes_project 11 49294117 49299259 + Tbc1d9b protein_coding processed_transcript MGP_129S1SvImJ_T0028834.1 MGP_129S1SvImJ_G0018241.1 mouse_genomes_project 11 49303873 49308897 + Tbc1d9b protein_coding processed_transcript MGP_129S1SvImJ_T0028835.1 MGP_129S1SvImJ_G0018241.1 mouse_genomes_project 11 49305262 49310132 + Tbc1d9b protein_coding processed_transcript MGP_129S1SvImJ_T0028836.1 MGP_129S1SvImJ_G0018241.1 mouse_genomes_project 11 49306822 49308656 + Tbc1d9b protein_coding processed_transcript MGP_129S1SvImJ_T0028837.1 MGP_129S1SvImJ_G0018241.1 mouse_genomes_project 11 49320343 49322776 + Tbc1d9b protein_coding processed_transcript MGP_129S1SvImJ_T0028737.1 MGP_129S1SvImJ_G0018207.1 mouse_genomes_project 11 47893177 47902866 - Irgm1 protein_coding processed_transcript MGP_129S1SvImJ_T0028738.1 MGP_129S1SvImJ_G0018207.1 mouse_genomes_project 11 47896454 47902557 - MGP_129S1SvImJ_P0028738 Irgm1 protein_coding protein_coding MGP_129S1SvImJ_T0028739.1 MGP_129S1SvImJ_G0018207.1 mouse_genomes_project 11 47897327 47902603 - MGP_129S1SvImJ_P0028739 Irgm1 protein_coding protein_coding MGP_129S1SvImJ_T0029532.1 MGP_129S1SvImJ_G0018436.1 mouse_genomes_project 11 61258211 61304964 - MGP_129S1SvImJ_P0029532 Slc47a2 protein_coding protein_coding MGP_129S1SvImJ_T0029533.1 MGP_129S1SvImJ_G0018436.1 mouse_genomes_project 11 61261623 61304954 - MGP_129S1SvImJ_P0029533 Slc47a2 protein_coding protein_coding MGP_129S1SvImJ_T0029534.1 MGP_129S1SvImJ_G0018436.1 mouse_genomes_project 11 61299062 61304688 - Slc47a2 protein_coding processed_transcript MGP_129S1SvImJ_T0032308.1 MGP_129S1SvImJ_G0019138.1 mouse_genomes_project 11 102828028 102832603 - Krt32 protein_coding processed_transcript MGP_129S1SvImJ_T0032309.1 MGP_129S1SvImJ_G0019138.1 mouse_genomes_project 11 102828037 102835385 - MGP_129S1SvImJ_P0032309 Krt32 protein_coding protein_coding MGP_129S1SvImJ_T0003379.1 MGP_129S1SvImJ_G0003114.1 mouse_genomes_project 11 124664135 124666047 - Gm11770 antisense antisense MGP_129S1SvImJ_T0006216.1 MGP_129S1SvImJ_G0005194.1 mouse_genomes_project 11 23122318 23146898 + Gm12069 lincRNA lincRNA MGP_129S1SvImJ_T0032277.1 MGP_129S1SvImJ_G0019107.1 mouse_genomes_project 11 102317492 102318457 - MGP_129S1SvImJ_P0032277 protein_coding protein_coding MGP_129S1SvImJ_T0032458.1 MGP_129S1SvImJ_G0019176.1 mouse_genomes_project 11 103880327 103887694 + MGP_129S1SvImJ_P0032458 Naglu protein_coding protein_coding MGP_129S1SvImJ_T0032459.1 MGP_129S1SvImJ_G0019176.1 mouse_genomes_project 11 103881867 103886593 + Naglu protein_coding processed_transcript MGP_129S1SvImJ_T0032460.1 MGP_129S1SvImJ_G0019176.1 mouse_genomes_project 11 103882268 103886828 + Naglu protein_coding processed_transcript MGP_129S1SvImJ_T0102164.1 MGP_129S1SvImJ_G0039999.1 mouse_genomes_project 11 112175343 112176305 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0028704.1 MGP_129S1SvImJ_G0018197.1 mouse_genomes_project 11 45495434 45514402 + MGP_129S1SvImJ_P0028704 BC053393 protein_coding protein_coding MGP_129S1SvImJ_T0012537.1 MGP_129S1SvImJ_G0010626.1 mouse_genomes_project 11 19595690 19596254 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028435.1 MGP_129S1SvImJ_G0018123.1 mouse_genomes_project 11 30025728 30096014 + MGP_129S1SvImJ_P0028435 Cpeb4 protein_coding protein_coding MGP_129S1SvImJ_T0028436.1 MGP_129S1SvImJ_G0018123.1 mouse_genomes_project 11 30025743 30100080 + MGP_129S1SvImJ_P0028436 Cpeb4 protein_coding protein_coding MGP_129S1SvImJ_T0028437.1 MGP_129S1SvImJ_G0018123.1 mouse_genomes_project 11 30026792 30100080 + MGP_129S1SvImJ_P0028437 Cpeb4 protein_coding protein_coding MGP_129S1SvImJ_T0034041.1 MGP_129S1SvImJ_G0019497.1 mouse_genomes_project 11 124825413 124835095 - Faap100 protein_coding retained_intron MGP_129S1SvImJ_T0034042.1 MGP_129S1SvImJ_G0019497.1 mouse_genomes_project 11 124825920 124835124 - MGP_129S1SvImJ_P0034042 Faap100 protein_coding protein_coding MGP_129S1SvImJ_T0034043.1 MGP_129S1SvImJ_G0019497.1 mouse_genomes_project 11 124826239 124827247 - Faap100 protein_coding retained_intron MGP_129S1SvImJ_T0034044.1 MGP_129S1SvImJ_G0019497.1 mouse_genomes_project 11 124829333 124830530 - Faap100 protein_coding processed_transcript MGP_129S1SvImJ_T0034045.1 MGP_129S1SvImJ_G0019497.1 mouse_genomes_project 11 124829388 124835096 - Faap100 protein_coding retained_intron MGP_129S1SvImJ_T0034046.1 MGP_129S1SvImJ_G0019497.1 mouse_genomes_project 11 124832529 124835069 - Faap100 protein_coding processed_transcript MGP_129S1SvImJ_T0034047.1 MGP_129S1SvImJ_G0019497.1 mouse_genomes_project 11 124833345 124834834 - Faap100 protein_coding processed_transcript MGP_129S1SvImJ_T0034048.1 MGP_129S1SvImJ_G0019497.1 mouse_genomes_project 11 124833682 124835095 - Faap100 protein_coding processed_transcript MGP_129S1SvImJ_T0031576.1 MGP_129S1SvImJ_G0018920.1 mouse_genomes_project 11 89750889 89767349 + MGP_129S1SvImJ_P0031576 Vezf1 protein_coding protein_coding MGP_129S1SvImJ_T0031577.1 MGP_129S1SvImJ_G0018920.1 mouse_genomes_project 11 89756200 89767349 + MGP_129S1SvImJ_P0031577 Vezf1 protein_coding protein_coding MGP_129S1SvImJ_T0030701.1 MGP_129S1SvImJ_G0018710.1 mouse_genomes_project 11 76154804 76167052 - MGP_129S1SvImJ_P0030701 Serpinf1 protein_coding protein_coding MGP_129S1SvImJ_T0030702.1 MGP_129S1SvImJ_G0018710.1 mouse_genomes_project 11 76155099 76163032 - MGP_129S1SvImJ_P0030702 Serpinf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030703.1 MGP_129S1SvImJ_G0018710.1 mouse_genomes_project 11 76155256 76160766 - MGP_129S1SvImJ_P0030703 Serpinf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030704.1 MGP_129S1SvImJ_G0018710.1 mouse_genomes_project 11 76158949 76166937 - MGP_129S1SvImJ_P0030704 Serpinf1 protein_coding protein_coding MGP_129S1SvImJ_T0030705.1 MGP_129S1SvImJ_G0018710.1 mouse_genomes_project 11 76159008 76160231 - Serpinf1 protein_coding retained_intron MGP_129S1SvImJ_T0030706.1 MGP_129S1SvImJ_G0018710.1 mouse_genomes_project 11 76159956 76166906 - MGP_129S1SvImJ_P0030706 Serpinf1 protein_coding protein_coding MGP_129S1SvImJ_T0030707.1 MGP_129S1SvImJ_G0018710.1 mouse_genomes_project 11 76160505 76166903 - MGP_129S1SvImJ_P0030707 Serpinf1 protein_coding protein_coding MGP_129S1SvImJ_T0030708.1 MGP_129S1SvImJ_G0018710.1 mouse_genomes_project 11 76161351 76163333 - MGP_129S1SvImJ_P0030708 Serpinf1 protein_coding protein_coding MGP_129S1SvImJ_T0031280.1 MGP_129S1SvImJ_G0018848.1 mouse_genomes_project 11 84759024 84763508 + MGP_129S1SvImJ_P0031280 1700020L24Rik protein_coding protein_coding MGP_129S1SvImJ_T0031281.1 MGP_129S1SvImJ_G0018848.1 mouse_genomes_project 11 84762561 84763103 + MGP_129S1SvImJ_P0031281 1700020L24Rik protein_coding protein_coding MGP_129S1SvImJ_T0017273.1 MGP_129S1SvImJ_G0015199.1 mouse_genomes_project 11 99283727 99326939 + D030028A08Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017274.1 MGP_129S1SvImJ_G0015199.1 mouse_genomes_project 11 99317645 99338540 + D030028A08Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017275.1 MGP_129S1SvImJ_G0015199.1 mouse_genomes_project 11 99317669 99333540 + D030028A08Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017276.1 MGP_129S1SvImJ_G0015199.1 mouse_genomes_project 11 99317792 99337375 + D030028A08Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0030893.1 MGP_129S1SvImJ_G0018750.1 mouse_genomes_project 11 78424791 78431963 + MGP_129S1SvImJ_P0030893 Abhd15 protein_coding protein_coding MGP_129S1SvImJ_T0030894.1 MGP_129S1SvImJ_G0018750.1 mouse_genomes_project 11 78425654 78450518 + MGP_129S1SvImJ_P0030894 Abhd15 protein_coding protein_coding MGP_129S1SvImJ_T0030896.1 MGP_129S1SvImJ_G0018750.1 mouse_genomes_project 11 78430535 78450516 + MGP_129S1SvImJ_P0030896 Abhd15 protein_coding protein_coding MGP_129S1SvImJ_T0032707.1 MGP_129S1SvImJ_G0019227.1 mouse_genomes_project 11 105206079 105224257 + MGP_129S1SvImJ_P0032707 BC030867 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032708.1 MGP_129S1SvImJ_G0019227.1 mouse_genomes_project 11 105206079 105224257 + MGP_129S1SvImJ_P0032708 BC030867 protein_coding protein_coding MGP_129S1SvImJ_T0032709.1 MGP_129S1SvImJ_G0019227.1 mouse_genomes_project 11 105213691 105218652 + BC030867 protein_coding processed_transcript MGP_129S1SvImJ_T0032710.1 MGP_129S1SvImJ_G0019227.1 mouse_genomes_project 11 105213695 105218650 + BC030867 protein_coding processed_transcript MGP_129S1SvImJ_T0032711.1 MGP_129S1SvImJ_G0019227.1 mouse_genomes_project 11 105219997 105224257 + BC030867 protein_coding processed_transcript MGP_129S1SvImJ_T0003331.1 MGP_129S1SvImJ_G0003076.1 mouse_genomes_project 11 107719175 107720165 - Gm11665 antisense antisense MGP_129S1SvImJ_T0003233.1 MGP_129S1SvImJ_G0002997.1 mouse_genomes_project 11 67889839 67895656 - Gm12301 antisense antisense MGP_129S1SvImJ_T0029755.1 MGP_129S1SvImJ_G0018483.1 mouse_genomes_project 11 67314668 67329361 - MGP_129S1SvImJ_P0029755 Adprm protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029756.1 MGP_129S1SvImJ_G0018483.1 mouse_genomes_project 11 67314804 67329337 - MGP_129S1SvImJ_P0029756 Adprm protein_coding protein_coding MGP_129S1SvImJ_T0029757.1 MGP_129S1SvImJ_G0018483.1 mouse_genomes_project 11 67315032 67317291 - Adprm protein_coding processed_transcript MGP_129S1SvImJ_T0029758.1 MGP_129S1SvImJ_G0018483.1 mouse_genomes_project 11 67318459 67329352 - Adprm protein_coding processed_transcript MGP_129S1SvImJ_T0029759.1 MGP_129S1SvImJ_G0018483.1 mouse_genomes_project 11 67318500 67329358 - Adprm protein_coding processed_transcript MGP_129S1SvImJ_T0029760.1 MGP_129S1SvImJ_G0018483.1 mouse_genomes_project 11 67318645 67329356 - Adprm protein_coding processed_transcript MGP_129S1SvImJ_T0003315.1 MGP_129S1SvImJ_G0003060.1 mouse_genomes_project 11 103452944 103463016 + Dhx58os antisense antisense MGP_129S1SvImJ_T0031569.1 MGP_129S1SvImJ_G0018919.1 mouse_genomes_project 11 89728138 89734516 + MGP_129S1SvImJ_P0031569 Srsf1 protein_coding protein_coding MGP_129S1SvImJ_T0031570.1 MGP_129S1SvImJ_G0018919.1 mouse_genomes_project 11 89728484 89732257 + MGP_129S1SvImJ_P0031570 Srsf1 protein_coding protein_coding MGP_129S1SvImJ_T0031571.1 MGP_129S1SvImJ_G0018919.1 mouse_genomes_project 11 89728491 89729595 + Srsf1 protein_coding retained_intron MGP_129S1SvImJ_T0031572.1 MGP_129S1SvImJ_G0018919.1 mouse_genomes_project 11 89728571 89731178 + MGP_129S1SvImJ_P0031572 Srsf1 protein_coding protein_coding MGP_129S1SvImJ_T0031573.1 MGP_129S1SvImJ_G0018919.1 mouse_genomes_project 11 89729335 89732239 + MGP_129S1SvImJ_P0031573 Srsf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031574.1 MGP_129S1SvImJ_G0018919.1 mouse_genomes_project 11 89729357 89731890 + MGP_129S1SvImJ_P0031574 Srsf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031575.1 MGP_129S1SvImJ_G0018919.1 mouse_genomes_project 11 89730180 89731819 + Srsf1 protein_coding retained_intron MGP_129S1SvImJ_T0012613.1 MGP_129S1SvImJ_G0010702.1 mouse_genomes_project 11 52561726 52562063 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009706.1 MGP_129S1SvImJ_G0007822.1 mouse_genomes_project 11 69386536 69386641 - Mir3062 miRNA miRNA MGP_129S1SvImJ_T0033651.1 MGP_129S1SvImJ_G0019420.1 mouse_genomes_project 11 120318482 120335986 - MGP_129S1SvImJ_P0033651 Evpl protein_coding protein_coding MGP_129S1SvImJ_T0101840.1 MGP_129S1SvImJ_G0039791.1 mouse_genomes_project 11 2840814 2863585 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101841.1 MGP_129S1SvImJ_G0039791.1 mouse_genomes_project 11 2840835 2863949 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101842.1 MGP_129S1SvImJ_G0039791.1 mouse_genomes_project 11 2840835 2866424 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101843.1 MGP_129S1SvImJ_G0039791.1 mouse_genomes_project 11 2840902 2865651 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101844.1 MGP_129S1SvImJ_G0039791.1 mouse_genomes_project 11 2845691 2866142 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0028235.1 MGP_129S1SvImJ_G0018082.1 mouse_genomes_project 11 20684307 20687589 + MGP_129S1SvImJ_P0028235 Zrsr1 protein_coding protein_coding MGP_129S1SvImJ_T0003314.1 MGP_129S1SvImJ_G0003059.1 mouse_genomes_project 11 103038903 103051468 - Gm14206 antisense antisense MGP_129S1SvImJ_T0009758.1 MGP_129S1SvImJ_G0007874.1 mouse_genomes_project 11 103203842 103203923 - Gm27374 miRNA miRNA MGP_129S1SvImJ_T0009773.1 MGP_129S1SvImJ_G0007889.1 mouse_genomes_project 11 111057831 111057889 + Mir6932 miRNA miRNA MGP_129S1SvImJ_T0102160.1 MGP_129S1SvImJ_G0039995.1 mouse_genomes_project 11 102612401 102612604 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0029507.1 MGP_129S1SvImJ_G0018431.1 mouse_genomes_project 11 60957796 61007656 + MGP_129S1SvImJ_P0029507 Kcnj12 protein_coding protein_coding MGP_129S1SvImJ_T0029508.1 MGP_129S1SvImJ_G0018431.1 mouse_genomes_project 11 61002328 61007656 + MGP_129S1SvImJ_P0029508 Kcnj12 protein_coding protein_coding MGP_129S1SvImJ_T0029509.1 MGP_129S1SvImJ_G0018431.1 mouse_genomes_project 11 61002328 61007652 + MGP_129S1SvImJ_P0029509 Kcnj12 protein_coding protein_coding MGP_129S1SvImJ_T0030484.1 MGP_129S1SvImJ_G0018638.1 mouse_genomes_project 11 73006779 73027700 - MGP_129S1SvImJ_P0030484 Smtnl2 protein_coding protein_coding MGP_129S1SvImJ_T0030485.1 MGP_129S1SvImJ_G0018638.1 mouse_genomes_project 11 73016010 73019245 - Smtnl2 protein_coding processed_transcript MGP_129S1SvImJ_T0030486.1 MGP_129S1SvImJ_G0018638.1 mouse_genomes_project 11 73017622 73018878 - Smtnl2 protein_coding processed_transcript MGP_129S1SvImJ_T0012614.1 MGP_129S1SvImJ_G0010703.1 mouse_genomes_project 11 52723434 52723822 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028676.1 MGP_129S1SvImJ_G0018188.1 mouse_genomes_project 11 44943850 45050625 + MGP_129S1SvImJ_P0028676 Adam19 protein_coding protein_coding MGP_129S1SvImJ_T0028677.1 MGP_129S1SvImJ_G0018188.1 mouse_genomes_project 11 45030526 45047146 + Adam19 protein_coding processed_transcript MGP_129S1SvImJ_T0028678.1 MGP_129S1SvImJ_G0018188.1 mouse_genomes_project 11 45036468 45040937 + Adam19 protein_coding retained_intron MGP_129S1SvImJ_T0031108.1 MGP_129S1SvImJ_G0018800.1 mouse_genomes_project 11 80634972 80639001 - MGP_129S1SvImJ_P0031108 Evi2a protein_coding protein_coding MGP_129S1SvImJ_T0031109.1 MGP_129S1SvImJ_G0018800.1 mouse_genomes_project 11 80634980 80639022 - MGP_129S1SvImJ_P0031109 Evi2a protein_coding protein_coding MGP_129S1SvImJ_T0031110.1 MGP_129S1SvImJ_G0018800.1 mouse_genomes_project 11 80635369 80636188 - MGP_129S1SvImJ_P0031110 Evi2a protein_coding protein_coding MGP_129S1SvImJ_T0031111.1 MGP_129S1SvImJ_G0018800.1 mouse_genomes_project 11 80636097 80636559 - MGP_129S1SvImJ_P0031111 Evi2a protein_coding protein_coding MGP_129S1SvImJ_T0031112.1 MGP_129S1SvImJ_G0018800.1 mouse_genomes_project 11 80636480 80639022 - Evi2a protein_coding processed_transcript MGP_129S1SvImJ_T0032889.1 MGP_129S1SvImJ_G0019259.1 mouse_genomes_project 11 106256505 106265920 - MGP_129S1SvImJ_P0032889 1700023F06Rik protein_coding protein_coding MGP_129S1SvImJ_T0032890.1 MGP_129S1SvImJ_G0019259.1 mouse_genomes_project 11 106256522 106260411 - MGP_129S1SvImJ_P0032890 1700023F06Rik protein_coding protein_coding MGP_129S1SvImJ_T0032891.1 MGP_129S1SvImJ_G0019259.1 mouse_genomes_project 11 106256977 106265894 - MGP_129S1SvImJ_P0032891 1700023F06Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032892.1 MGP_129S1SvImJ_G0019259.1 mouse_genomes_project 11 106257886 106265895 - MGP_129S1SvImJ_P0032892 1700023F06Rik protein_coding protein_coding MGP_129S1SvImJ_T0032893.1 MGP_129S1SvImJ_G0019259.1 mouse_genomes_project 11 106258267 106265920 - 1700023F06Rik protein_coding retained_intron MGP_129S1SvImJ_T0003230.1 MGP_129S1SvImJ_G0002996.1 mouse_genomes_project 11 67500816 67533049 - Gm12300 antisense antisense MGP_129S1SvImJ_T0003231.1 MGP_129S1SvImJ_G0002996.1 mouse_genomes_project 11 67514505 67522849 - Gm12300 antisense antisense MGP_129S1SvImJ_T0003232.1 MGP_129S1SvImJ_G0002996.1 mouse_genomes_project 11 67514822 67532757 - Gm12300 antisense antisense MGP_129S1SvImJ_T0032997.1 MGP_129S1SvImJ_G0019284.1 mouse_genomes_project 11 108519832 108560398 + Mrc2 protein_coding processed_transcript MGP_129S1SvImJ_T0032998.1 MGP_129S1SvImJ_G0019284.1 mouse_genomes_project 11 108519835 108586037 + MGP_129S1SvImJ_P0032998 Mrc2 protein_coding protein_coding MGP_129S1SvImJ_T0032999.1 MGP_129S1SvImJ_G0019284.1 mouse_genomes_project 11 108519857 108578769 + MGP_129S1SvImJ_P0032999 Mrc2 protein_coding protein_coding MGP_129S1SvImJ_T0033000.1 MGP_129S1SvImJ_G0019284.1 mouse_genomes_project 11 108562556 108565804 + Mrc2 protein_coding processed_transcript MGP_129S1SvImJ_T0033001.1 MGP_129S1SvImJ_G0019284.1 mouse_genomes_project 11 108575725 108578038 + Mrc2 protein_coding retained_intron MGP_129S1SvImJ_T0033909.1 MGP_129S1SvImJ_G0019472.1 mouse_genomes_project 11 123365356 123374748 + MGP_129S1SvImJ_P0033909 Cbx2 protein_coding protein_coding MGP_129S1SvImJ_T0033910.1 MGP_129S1SvImJ_G0019472.1 mouse_genomes_project 11 123367202 123371516 + Cbx2 protein_coding processed_transcript MGP_129S1SvImJ_T0029291.1 MGP_129S1SvImJ_G0018372.1 mouse_genomes_project 11 58523099 58523912 + MGP_129S1SvImJ_P0029291 Olfr316 protein_coding protein_coding MGP_129S1SvImJ_T0012709.1 MGP_129S1SvImJ_G0010798.1 mouse_genomes_project 11 83995717 83996820 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006242.1 MGP_129S1SvImJ_G0005215.1 mouse_genomes_project 11 43099970 43101789 - Gm12154 lincRNA lincRNA MGP_129S1SvImJ_T0003265.1 MGP_129S1SvImJ_G0003025.1 mouse_genomes_project 11 86726507 86726956 + Appbp2os antisense pseudogene MGP_129S1SvImJ_T0003266.1 MGP_129S1SvImJ_G0003025.1 mouse_genomes_project 11 86726903 86729994 + Appbp2os antisense antisense MGP_129S1SvImJ_T0006300.1 MGP_129S1SvImJ_G0005264.1 mouse_genomes_project 11 80823456 80824247 + Gm11205 lincRNA lincRNA MGP_129S1SvImJ_T0009713.1 MGP_129S1SvImJ_G0007829.1 mouse_genomes_project 11 70755233 70755358 - Mir497b miRNA miRNA MGP_129S1SvImJ_T0028794.1 MGP_129S1SvImJ_G0018227.1 mouse_genomes_project 11 48532279 48533352 + MGP_129S1SvImJ_P0028794 Olfr1389 protein_coding protein_coding MGP_129S1SvImJ_T0032258.1 MGP_129S1SvImJ_G0019090.1 mouse_genomes_project 11 102027805 102039071 - MGP_129S1SvImJ_P0032258 Krt28 protein_coding protein_coding MGP_129S1SvImJ_T0003329.1 MGP_129S1SvImJ_G0003074.1 mouse_genomes_project 11 106430072 106431511 + Arhgap27os1 antisense antisense MGP_129S1SvImJ_T0003152.1 MGP_129S1SvImJ_G0002928.1 mouse_genomes_project 11 21892095 21908826 - Gm12064 antisense antisense MGP_129S1SvImJ_T0033341.1 MGP_129S1SvImJ_G0019360.1 mouse_genomes_project 11 118731165 118735820 - Btbd17 protein_coding processed_transcript MGP_129S1SvImJ_T0033342.1 MGP_129S1SvImJ_G0019360.1 mouse_genomes_project 11 118731165 118735857 - Btbd17 protein_coding processed_transcript MGP_129S1SvImJ_T0033343.1 MGP_129S1SvImJ_G0019360.1 mouse_genomes_project 11 118731165 118735844 - MGP_129S1SvImJ_P0033343 Btbd17 protein_coding protein_coding MGP_129S1SvImJ_T0033344.1 MGP_129S1SvImJ_G0019360.1 mouse_genomes_project 11 118732054 118735892 - Btbd17 protein_coding processed_transcript MGP_129S1SvImJ_T0033345.1 MGP_129S1SvImJ_G0019360.1 mouse_genomes_project 11 118732233 118735846 - Btbd17 protein_coding processed_transcript MGP_129S1SvImJ_T0033346.1 MGP_129S1SvImJ_G0019360.1 mouse_genomes_project 11 118732380 118735820 - Btbd17 protein_coding processed_transcript MGP_129S1SvImJ_T0033347.1 MGP_129S1SvImJ_G0019360.1 mouse_genomes_project 11 118732417 118735839 - Btbd17 protein_coding processed_transcript MGP_129S1SvImJ_T0006350.1 MGP_129S1SvImJ_G0005295.1 mouse_genomes_project 11 102852888 102859232 - Gm12347 lincRNA lincRNA MGP_129S1SvImJ_T0101615.1 MGP_129S1SvImJ_G0039660.1 mouse_genomes_project 11 110945317 110945692 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0029209.1 MGP_129S1SvImJ_G0018336.1 mouse_genomes_project 11 57098177 57134484 - MGP_129S1SvImJ_P0029209 Fam114a2 protein_coding protein_coding MGP_129S1SvImJ_T0029210.1 MGP_129S1SvImJ_G0018336.1 mouse_genomes_project 11 57098403 57134470 - MGP_129S1SvImJ_P0029210 Fam114a2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0029211.1 MGP_129S1SvImJ_G0018336.1 mouse_genomes_project 11 57121174 57123286 - Fam114a2 protein_coding processed_transcript MGP_129S1SvImJ_T0029212.1 MGP_129S1SvImJ_G0018336.1 mouse_genomes_project 11 57123232 57134483 - Fam114a2 protein_coding processed_transcript MGP_129S1SvImJ_T0003327.1 MGP_129S1SvImJ_G0003072.1 mouse_genomes_project 11 106411445 106417062 + Arhgap27os3 antisense antisense MGP_129S1SvImJ_T0017199.1 MGP_129S1SvImJ_G0015157.1 mouse_genomes_project 11 20541428 20544504 + Gm20456 processed_transcript processed_transcript MGP_129S1SvImJ_T0027766.1 MGP_129S1SvImJ_G0017972.1 mouse_genomes_project 11 982949 1001199 + MGP_129S1SvImJ_P0027766 Sec14l3 protein_coding protein_coding MGP_129S1SvImJ_T0027767.1 MGP_129S1SvImJ_G0017972.1 mouse_genomes_project 11 982999 993053 + Sec14l3 protein_coding retained_intron MGP_129S1SvImJ_T0027768.1 MGP_129S1SvImJ_G0017972.1 mouse_genomes_project 11 983060 999788 + Sec14l3 protein_coding processed_transcript MGP_129S1SvImJ_T0027769.1 MGP_129S1SvImJ_G0017972.1 mouse_genomes_project 11 983060 999788 + Sec14l3 protein_coding processed_transcript MGP_129S1SvImJ_T0027770.1 MGP_129S1SvImJ_G0017972.1 mouse_genomes_project 11 995013 1000224 + Sec14l3 protein_coding processed_transcript MGP_129S1SvImJ_T0006370.1 MGP_129S1SvImJ_G0005312.1 mouse_genomes_project 11 116823039 116992823 - 2610035D17Rik lincRNA lincRNA MGP_129S1SvImJ_T0006371.1 MGP_129S1SvImJ_G0005312.1 mouse_genomes_project 11 116823039 116992807 - 2610035D17Rik lincRNA lincRNA MGP_129S1SvImJ_T0006372.1 MGP_129S1SvImJ_G0005312.1 mouse_genomes_project 11 116823039 116961178 - 2610035D17Rik lincRNA lincRNA MGP_129S1SvImJ_T0006373.1 MGP_129S1SvImJ_G0005312.1 mouse_genomes_project 11 116823661 116961178 - 2610035D17Rik lincRNA lincRNA MGP_129S1SvImJ_T0028727.1 MGP_129S1SvImJ_G0018205.1 mouse_genomes_project 11 47834437 47846788 - MGP_129S1SvImJ_P0028727 Trim41 protein_coding protein_coding MGP_129S1SvImJ_T0028728.1 MGP_129S1SvImJ_G0018205.1 mouse_genomes_project 11 47836419 47840429 - MGP_129S1SvImJ_P0028728 Trim41 protein_coding protein_coding MGP_129S1SvImJ_T0028729.1 MGP_129S1SvImJ_G0018205.1 mouse_genomes_project 11 47837130 47846388 - MGP_129S1SvImJ_P0028729 Trim41 protein_coding protein_coding MGP_129S1SvImJ_T0028730.1 MGP_129S1SvImJ_G0018205.1 mouse_genomes_project 11 47837232 47844264 - MGP_129S1SvImJ_P0028730 Trim41 protein_coding protein_coding MGP_129S1SvImJ_T0028895.1 MGP_129S1SvImJ_G0018255.1 mouse_genomes_project 11 50067515 50080924 - MGP_129S1SvImJ_P0028895 Zfp454 protein_coding protein_coding MGP_129S1SvImJ_T0028896.1 MGP_129S1SvImJ_G0018255.1 mouse_genomes_project 11 50068683 50082156 - Zfp454 protein_coding processed_transcript MGP_129S1SvImJ_T0028897.1 MGP_129S1SvImJ_G0018255.1 mouse_genomes_project 11 50072404 50082156 - MGP_129S1SvImJ_P0028897 Zfp454 protein_coding protein_coding MGP_129S1SvImJ_T0028898.1 MGP_129S1SvImJ_G0018255.1 mouse_genomes_project 11 50072616 50082035 - Zfp454 protein_coding processed_transcript MGP_129S1SvImJ_T0006396.1 MGP_129S1SvImJ_G0005331.1 mouse_genomes_project 11 123580160 123584339 + lincRNA lincRNA MGP_129S1SvImJ_T0012740.1 MGP_129S1SvImJ_G0010829.1 mouse_genomes_project 11 99145719 99146106 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011822.1 MGP_129S1SvImJ_G0009934.1 mouse_genomes_project 11 74999670 75000641 + MGP_129S1SvImJ_P0011822 Olfr409-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0099278.1 MGP_129S1SvImJ_G0037345.1 mouse_genomes_project 11 98163649 98163774 + Gm24725 snRNA snRNA MGP_129S1SvImJ_T0029583.1 MGP_129S1SvImJ_G0018443.1 mouse_genomes_project 11 61626303 61645368 + MGP_129S1SvImJ_P0029583 Grap protein_coding protein_coding MGP_129S1SvImJ_T0029584.1 MGP_129S1SvImJ_G0018443.1 mouse_genomes_project 11 61641636 61642471 + Grap protein_coding processed_transcript MGP_129S1SvImJ_T0012639.1 MGP_129S1SvImJ_G0010728.1 mouse_genomes_project 11 58283351 58283635 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031479.1 MGP_129S1SvImJ_G0018896.1 mouse_genomes_project 11 88502045 88560378 - MGP_129S1SvImJ_P0031479 Ypel2 protein_coding protein_coding MGP_129S1SvImJ_T0029150.1 MGP_129S1SvImJ_G0018319.1 mouse_genomes_project 11 54313861 54348590 - MGP_129S1SvImJ_P0029150 Lyrm7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029151.1 MGP_129S1SvImJ_G0018319.1 mouse_genomes_project 11 54326832 54348282 - MGP_129S1SvImJ_P0029151 Lyrm7 protein_coding protein_coding MGP_129S1SvImJ_T0029152.1 MGP_129S1SvImJ_G0018319.1 mouse_genomes_project 11 54326833 54348262 - MGP_129S1SvImJ_P0029152 Lyrm7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029153.1 MGP_129S1SvImJ_G0018319.1 mouse_genomes_project 11 54328112 54339695 - Lyrm7 protein_coding retained_intron MGP_129S1SvImJ_T0029154.1 MGP_129S1SvImJ_G0018319.1 mouse_genomes_project 11 54328152 54348283 - Lyrm7 protein_coding processed_transcript MGP_129S1SvImJ_T0029155.1 MGP_129S1SvImJ_G0018319.1 mouse_genomes_project 11 54339382 54348259 - Lyrm7 protein_coding retained_intron MGP_129S1SvImJ_T0029071.1 MGP_129S1SvImJ_G0018303.1 mouse_genomes_project 11 53133034 53137348 + MGP_129S1SvImJ_P0029071 Il5 protein_coding protein_coding MGP_129S1SvImJ_T0028293.1 MGP_129S1SvImJ_G0018093.1 mouse_genomes_project 11 21645436 21679452 - MGP_129S1SvImJ_P0028293 Papolg protein_coding protein_coding MGP_129S1SvImJ_T0028294.1 MGP_129S1SvImJ_G0018093.1 mouse_genomes_project 11 21648034 21651261 - MGP_129S1SvImJ_P0028294 Papolg protein_coding protein_coding MGP_129S1SvImJ_T0028295.1 MGP_129S1SvImJ_G0018093.1 mouse_genomes_project 11 21649201 21676103 - Papolg protein_coding processed_transcript MGP_129S1SvImJ_T0028296.1 MGP_129S1SvImJ_G0018093.1 mouse_genomes_project 11 21652837 21679435 - MGP_129S1SvImJ_P0028296 Papolg protein_coding protein_coding MGP_129S1SvImJ_T0006213.1 MGP_129S1SvImJ_G0005192.1 mouse_genomes_project 11 22708701 22733482 - Gm12665 lincRNA lincRNA MGP_129S1SvImJ_T0006214.1 MGP_129S1SvImJ_G0005192.1 mouse_genomes_project 11 22708701 22733490 - Gm12665 lincRNA lincRNA MGP_129S1SvImJ_T0012738.1 MGP_129S1SvImJ_G0010827.1 mouse_genomes_project 11 98556192 98556662 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012668.1 MGP_129S1SvImJ_G0010757.1 mouse_genomes_project 11 70200654 70201244 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029190.1 MGP_129S1SvImJ_G0018330.1 mouse_genomes_project 11 54920264 54947680 - MGP_129S1SvImJ_P0029190 Sparc protein_coding protein_coding MGP_129S1SvImJ_T0029191.1 MGP_129S1SvImJ_G0018330.1 mouse_genomes_project 11 54920265 54947498 - MGP_129S1SvImJ_P0029191 Sparc protein_coding protein_coding MGP_129S1SvImJ_T0029192.1 MGP_129S1SvImJ_G0018330.1 mouse_genomes_project 11 54921148 54925434 - Sparc protein_coding processed_transcript MGP_129S1SvImJ_T0029193.1 MGP_129S1SvImJ_G0018330.1 mouse_genomes_project 11 54921281 54929661 - Sparc protein_coding processed_transcript MGP_129S1SvImJ_T0029194.1 MGP_129S1SvImJ_G0018330.1 mouse_genomes_project 11 54925111 54947498 - MGP_129S1SvImJ_P0029194 Sparc protein_coding protein_coding MGP_129S1SvImJ_T0029195.1 MGP_129S1SvImJ_G0018330.1 mouse_genomes_project 11 54936866 54947500 - Sparc protein_coding processed_transcript MGP_129S1SvImJ_T0012736.1 MGP_129S1SvImJ_G0010825.1 mouse_genomes_project 11 97993434 97993609 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012656.1 MGP_129S1SvImJ_G0010745.1 mouse_genomes_project 11 62760311 62760610 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102163.1 MGP_129S1SvImJ_G0039998.1 mouse_genomes_project 11 104199514 104200411 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0031391.1 MGP_129S1SvImJ_G0018878.1 mouse_genomes_project 11 86458541 86624127 - MGP_129S1SvImJ_P0031391 Usp32 protein_coding protein_coding MGP_129S1SvImJ_T0031392.1 MGP_129S1SvImJ_G0018878.1 mouse_genomes_project 11 86459746 86508009 - MGP_129S1SvImJ_P0031392 Usp32 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031393.1 MGP_129S1SvImJ_G0018878.1 mouse_genomes_project 11 86460369 86462771 - MGP_129S1SvImJ_P0031393 Usp32 protein_coding protein_coding MGP_129S1SvImJ_T0031394.1 MGP_129S1SvImJ_G0018878.1 mouse_genomes_project 11 86506035 86523644 - MGP_129S1SvImJ_P0031394 Usp32 protein_coding protein_coding MGP_129S1SvImJ_T0031395.1 MGP_129S1SvImJ_G0018878.1 mouse_genomes_project 11 86515372 86527323 - MGP_129S1SvImJ_P0031395 Usp32 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031396.1 MGP_129S1SvImJ_G0018878.1 mouse_genomes_project 11 86532143 86538876 - Usp32 protein_coding retained_intron MGP_129S1SvImJ_T0031397.1 MGP_129S1SvImJ_G0018878.1 mouse_genomes_project 11 86560198 86624250 - Usp32 protein_coding processed_transcript MGP_129S1SvImJ_T0031398.1 MGP_129S1SvImJ_G0018878.1 mouse_genomes_project 11 86579950 86624057 - Usp32 protein_coding processed_transcript MGP_129S1SvImJ_T0031399.1 MGP_129S1SvImJ_G0018878.1 mouse_genomes_project 11 86583435 86624018 - Usp32 protein_coding retained_intron MGP_129S1SvImJ_T0033293.1 MGP_129S1SvImJ_G0019351.1 mouse_genomes_project 11 117478032 117491760 + MGP_129S1SvImJ_P0033293 Cog1 protein_coding protein_coding MGP_129S1SvImJ_T0033294.1 MGP_129S1SvImJ_G0019351.1 mouse_genomes_project 11 117478191 117491208 + MGP_129S1SvImJ_P0033294 Cog1 protein_coding protein_coding MGP_129S1SvImJ_T0033295.1 MGP_129S1SvImJ_G0019351.1 mouse_genomes_project 11 117484284 117485852 + Cog1 protein_coding retained_intron MGP_129S1SvImJ_T0033296.1 MGP_129S1SvImJ_G0019351.1 mouse_genomes_project 11 117486977 117497485 + MGP_129S1SvImJ_P0033296 Cog1 protein_coding protein_coding MGP_129S1SvImJ_T0033297.1 MGP_129S1SvImJ_G0019351.1 mouse_genomes_project 11 117487114 117493064 + MGP_129S1SvImJ_P0033297 Cog1 protein_coding protein_coding MGP_129S1SvImJ_T0033298.1 MGP_129S1SvImJ_G0019351.1 mouse_genomes_project 11 117487132 117493100 + MGP_129S1SvImJ_P0033298 Cog1 protein_coding protein_coding MGP_129S1SvImJ_T0029974.1 MGP_129S1SvImJ_G0018532.1 mouse_genomes_project 11 69824067 69824905 + Naa38 protein_coding processed_transcript MGP_129S1SvImJ_T0029975.1 MGP_129S1SvImJ_G0018532.1 mouse_genomes_project 11 69824227 69825260 + MGP_129S1SvImJ_P0029975 Naa38 protein_coding protein_coding MGP_129S1SvImJ_T0029976.1 MGP_129S1SvImJ_G0018532.1 mouse_genomes_project 11 69824394 69825260 + Naa38 protein_coding processed_transcript MGP_129S1SvImJ_T0029977.1 MGP_129S1SvImJ_G0018532.1 mouse_genomes_project 11 69824698 69825260 + Naa38 protein_coding processed_transcript MGP_129S1SvImJ_T0034292.1 MGP_129S1SvImJ_G0019549.1 mouse_genomes_project 11 125983133 125998763 + MGP_129S1SvImJ_P0034292 Fn3k protein_coding protein_coding MGP_129S1SvImJ_T0034293.1 MGP_129S1SvImJ_G0019549.1 mouse_genomes_project 11 125983187 125991234 + MGP_129S1SvImJ_P0034293 Fn3k protein_coding protein_coding MGP_129S1SvImJ_T0034294.1 MGP_129S1SvImJ_G0019549.1 mouse_genomes_project 11 125983188 125991758 + MGP_129S1SvImJ_P0034294 Fn3k protein_coding protein_coding MGP_129S1SvImJ_T0028778.1 MGP_129S1SvImJ_G0018223.1 mouse_genomes_project 11 48309741 48329719 + MGP_129S1SvImJ_P0028778 Mgat1 protein_coding protein_coding MGP_129S1SvImJ_T0028779.1 MGP_129S1SvImJ_G0018223.1 mouse_genomes_project 11 48309796 48329724 + MGP_129S1SvImJ_P0028779 Mgat1 protein_coding protein_coding MGP_129S1SvImJ_T0028780.1 MGP_129S1SvImJ_G0018223.1 mouse_genomes_project 11 48309959 48311011 + Mgat1 protein_coding processed_transcript MGP_129S1SvImJ_T0028781.1 MGP_129S1SvImJ_G0018223.1 mouse_genomes_project 11 48310117 48310968 + Mgat1 protein_coding processed_transcript MGP_129S1SvImJ_T0028782.1 MGP_129S1SvImJ_G0018223.1 mouse_genomes_project 11 48310781 48327388 + Mgat1 protein_coding processed_transcript MGP_129S1SvImJ_T0028783.1 MGP_129S1SvImJ_G0018223.1 mouse_genomes_project 11 48313027 48329692 + MGP_129S1SvImJ_P0028783 Mgat1 protein_coding protein_coding MGP_129S1SvImJ_T0028784.1 MGP_129S1SvImJ_G0018223.1 mouse_genomes_project 11 48313033 48327519 + Mgat1 protein_coding processed_transcript MGP_129S1SvImJ_T0028785.1 MGP_129S1SvImJ_G0018223.1 mouse_genomes_project 11 48314507 48317188 + Mgat1 protein_coding processed_transcript MGP_129S1SvImJ_T0028786.1 MGP_129S1SvImJ_G0018223.1 mouse_genomes_project 11 48316062 48329727 + MGP_129S1SvImJ_P0028786 Mgat1 protein_coding protein_coding MGP_129S1SvImJ_T0028787.1 MGP_129S1SvImJ_G0018223.1 mouse_genomes_project 11 48316115 48323523 + Mgat1 protein_coding processed_transcript MGP_129S1SvImJ_T0028788.1 MGP_129S1SvImJ_G0018223.1 mouse_genomes_project 11 48316122 48327388 + Mgat1 protein_coding processed_transcript MGP_129S1SvImJ_T0028789.1 MGP_129S1SvImJ_G0018223.1 mouse_genomes_project 11 48316140 48327988 + MGP_129S1SvImJ_P0028789 Mgat1 protein_coding protein_coding MGP_129S1SvImJ_T0028790.1 MGP_129S1SvImJ_G0018223.1 mouse_genomes_project 11 48321794 48323385 + Mgat1 protein_coding processed_transcript MGP_129S1SvImJ_T0030273.1 MGP_129S1SvImJ_G0018595.1 mouse_genomes_project 11 70985994 70987316 + MGP_129S1SvImJ_P0030273 Med11 protein_coding protein_coding MGP_129S1SvImJ_T0030274.1 MGP_129S1SvImJ_G0018595.1 mouse_genomes_project 11 70985994 70987803 + MGP_129S1SvImJ_P0030274 Med11 protein_coding protein_coding MGP_129S1SvImJ_T0030275.1 MGP_129S1SvImJ_G0018595.1 mouse_genomes_project 11 70986007 70987640 + Med11 protein_coding retained_intron MGP_129S1SvImJ_T0029089.1 MGP_129S1SvImJ_G0018307.1 mouse_genomes_project 11 53294613 53325251 - MGP_129S1SvImJ_P0029089 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0029090.1 MGP_129S1SvImJ_G0018307.1 mouse_genomes_project 11 53303824 53325307 - MGP_129S1SvImJ_P0029090 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0003134.1 MGP_129S1SvImJ_G0002916.1 mouse_genomes_project 11 3003820 3006924 + antisense antisense MGP_129S1SvImJ_T0099286.1 MGP_129S1SvImJ_G0037353.1 mouse_genomes_project 11 104524276 104524467 + Gm23849 snRNA snRNA MGP_129S1SvImJ_T0028236.1 MGP_129S1SvImJ_G0018083.1 mouse_genomes_project 11 20705224 20718486 + MGP_129S1SvImJ_P0028236 Cct4 protein_coding protein_coding MGP_129S1SvImJ_T0028237.1 MGP_129S1SvImJ_G0018083.1 mouse_genomes_project 11 20705331 20709095 + MGP_129S1SvImJ_P0028237 Cct4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028238.1 MGP_129S1SvImJ_G0018083.1 mouse_genomes_project 11 20705344 20714582 + Cct4 protein_coding retained_intron MGP_129S1SvImJ_T0028239.1 MGP_129S1SvImJ_G0018083.1 mouse_genomes_project 11 20705355 20711802 + MGP_129S1SvImJ_P0028239 Cct4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028240.1 MGP_129S1SvImJ_G0018083.1 mouse_genomes_project 11 20705355 20717857 + MGP_129S1SvImJ_P0028240 Cct4 protein_coding protein_coding MGP_129S1SvImJ_T0028241.1 MGP_129S1SvImJ_G0018083.1 mouse_genomes_project 11 20705357 20711855 + MGP_129S1SvImJ_P0028241 Cct4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028242.1 MGP_129S1SvImJ_G0018083.1 mouse_genomes_project 11 20710329 20711807 + Cct4 protein_coding retained_intron MGP_129S1SvImJ_T0028243.1 MGP_129S1SvImJ_G0018083.1 mouse_genomes_project 11 20715642 20716325 + Cct4 protein_coding processed_transcript MGP_129S1SvImJ_T0028244.1 MGP_129S1SvImJ_G0018083.1 mouse_genomes_project 11 20716639 20717561 + Cct4 protein_coding retained_intron MGP_129S1SvImJ_T0006272.1 MGP_129S1SvImJ_G0005242.1 mouse_genomes_project 11 64316278 64335059 + Gm12290 lincRNA lincRNA MGP_129S1SvImJ_T0009689.1 MGP_129S1SvImJ_G0007805.1 mouse_genomes_project 11 51396821 51396932 - Gm24157 miRNA miRNA MGP_129S1SvImJ_T0003209.1 MGP_129S1SvImJ_G0002978.1 mouse_genomes_project 11 61468951 61469625 - B9d1os antisense antisense MGP_129S1SvImJ_T0031287.1 MGP_129S1SvImJ_G0018850.1 mouse_genomes_project 11 84796647 84820519 + Taf15 protein_coding processed_transcript MGP_129S1SvImJ_T0031288.1 MGP_129S1SvImJ_G0018850.1 mouse_genomes_project 11 84796653 84839017 + MGP_129S1SvImJ_P0031288 Taf15 protein_coding protein_coding MGP_129S1SvImJ_T0031289.1 MGP_129S1SvImJ_G0018850.1 mouse_genomes_project 11 84796672 84812518 + Taf15 protein_coding retained_intron MGP_129S1SvImJ_T0031290.1 MGP_129S1SvImJ_G0018850.1 mouse_genomes_project 11 84796676 84820351 + Taf15 protein_coding processed_transcript MGP_129S1SvImJ_T0031291.1 MGP_129S1SvImJ_G0018850.1 mouse_genomes_project 11 84820332 84839017 + MGP_129S1SvImJ_P0031291 Taf15 protein_coding protein_coding MGP_129S1SvImJ_T0012727.1 MGP_129S1SvImJ_G0010816.1 mouse_genomes_project 11 92712151 92713733 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012676.1 MGP_129S1SvImJ_G0010765.1 mouse_genomes_project 11 71449920 71451235 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033360.1 MGP_129S1SvImJ_G0019364.1 mouse_genomes_project 11 118889467 118904689 - MGP_129S1SvImJ_P0033360 Cd300lb protein_coding protein_coding MGP_129S1SvImJ_T0033361.1 MGP_129S1SvImJ_G0019364.1 mouse_genomes_project 11 118889467 118904674 - MGP_129S1SvImJ_P0033361 Cd300lb protein_coding protein_coding MGP_129S1SvImJ_T0033362.1 MGP_129S1SvImJ_G0019364.1 mouse_genomes_project 11 118898609 118904590 - Cd300lb protein_coding processed_transcript MGP_129S1SvImJ_T0012687.1 MGP_129S1SvImJ_G0010776.1 mouse_genomes_project 11 75800880 75801231 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009688.1 MGP_129S1SvImJ_G0007804.1 mouse_genomes_project 11 49534213 49534308 - Mir804 miRNA miRNA MGP_129S1SvImJ_T0017189.1 MGP_129S1SvImJ_G0015154.1 mouse_genomes_project 11 14325570 14344066 - Eldr processed_transcript processed_transcript MGP_129S1SvImJ_T0017190.1 MGP_129S1SvImJ_G0015154.1 mouse_genomes_project 11 14325575 14344085 - Eldr processed_transcript processed_transcript MGP_129S1SvImJ_T0017191.1 MGP_129S1SvImJ_G0015154.1 mouse_genomes_project 11 14325738 14344009 - Eldr processed_transcript processed_transcript MGP_129S1SvImJ_T0017192.1 MGP_129S1SvImJ_G0015154.1 mouse_genomes_project 11 14326002 14344067 - Eldr processed_transcript processed_transcript MGP_129S1SvImJ_T0017193.1 MGP_129S1SvImJ_G0015154.1 mouse_genomes_project 11 14326045 14344249 - Eldr processed_transcript processed_transcript MGP_129S1SvImJ_T0017194.1 MGP_129S1SvImJ_G0015154.1 mouse_genomes_project 11 14326118 14344049 - Eldr processed_transcript processed_transcript MGP_129S1SvImJ_T0017195.1 MGP_129S1SvImJ_G0015154.1 mouse_genomes_project 11 14329595 14344060 - Eldr processed_transcript processed_transcript MGP_129S1SvImJ_T0033446.1 MGP_129S1SvImJ_G0019387.1 mouse_genomes_project 11 119462240 119469967 + MGP_129S1SvImJ_P0033446 Trim80 protein_coding protein_coding MGP_129S1SvImJ_T0012533.1 MGP_129S1SvImJ_G0010622.1 mouse_genomes_project 11 18892209 18892510 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031624.1 MGP_129S1SvImJ_G0018937.1 mouse_genomes_project 11 92001933 92061398 + Mmd protein_coding processed_transcript MGP_129S1SvImJ_T0031625.1 MGP_129S1SvImJ_G0018937.1 mouse_genomes_project 11 92001933 92063757 + Mmd protein_coding processed_transcript MGP_129S1SvImJ_T0031626.1 MGP_129S1SvImJ_G0018937.1 mouse_genomes_project 11 92001935 92040599 + Mmd protein_coding processed_transcript MGP_129S1SvImJ_T0031627.1 MGP_129S1SvImJ_G0018937.1 mouse_genomes_project 11 92061957 92080765 + MGP_129S1SvImJ_P0031627 Mmd protein_coding protein_coding MGP_129S1SvImJ_T0031628.1 MGP_129S1SvImJ_G0018937.1 mouse_genomes_project 11 92061977 92090921 + MGP_129S1SvImJ_P0031628 Mmd protein_coding protein_coding MGP_129S1SvImJ_T0032013.1 MGP_129S1SvImJ_G0019030.1 mouse_genomes_project 11 99779501 99820558 + MGP_129S1SvImJ_P0032013 Socs7 protein_coding protein_coding MGP_129S1SvImJ_T0032014.1 MGP_129S1SvImJ_G0019030.1 mouse_genomes_project 11 99797730 99798961 + Socs7 protein_coding processed_transcript MGP_129S1SvImJ_T0030399.1 MGP_129S1SvImJ_G0018619.1 mouse_genomes_project 11 71544486 71553319 + MGP_129S1SvImJ_P0030399 Rpain protein_coding protein_coding MGP_129S1SvImJ_T0030400.1 MGP_129S1SvImJ_G0018619.1 mouse_genomes_project 11 71544500 71546193 + MGP_129S1SvImJ_P0030400 Rpain protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030401.1 MGP_129S1SvImJ_G0018619.1 mouse_genomes_project 11 71544753 71549648 + Rpain protein_coding retained_intron MGP_129S1SvImJ_T0030402.1 MGP_129S1SvImJ_G0018619.1 mouse_genomes_project 11 71544759 71546623 + Rpain protein_coding retained_intron MGP_129S1SvImJ_T0030403.1 MGP_129S1SvImJ_G0018619.1 mouse_genomes_project 11 71544764 71547765 + Rpain protein_coding retained_intron MGP_129S1SvImJ_T0030404.1 MGP_129S1SvImJ_G0018619.1 mouse_genomes_project 11 71544780 71553173 + MGP_129S1SvImJ_P0030404 Rpain protein_coding protein_coding MGP_129S1SvImJ_T0030405.1 MGP_129S1SvImJ_G0018619.1 mouse_genomes_project 11 71544780 71549681 + MGP_129S1SvImJ_P0030405 Rpain protein_coding unknown_likely_coding MGP_129S1SvImJ_T0030406.1 MGP_129S1SvImJ_G0018619.1 mouse_genomes_project 11 71544780 71553173 + MGP_129S1SvImJ_P0030406 Rpain protein_coding protein_coding MGP_129S1SvImJ_T0030407.1 MGP_129S1SvImJ_G0018619.1 mouse_genomes_project 11 71544780 71553173 + MGP_129S1SvImJ_P0030407 Rpain protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030408.1 MGP_129S1SvImJ_G0018619.1 mouse_genomes_project 11 71544780 71553173 + MGP_129S1SvImJ_P0030408 Rpain protein_coding protein_coding MGP_129S1SvImJ_T0030409.1 MGP_129S1SvImJ_G0018619.1 mouse_genomes_project 11 71544780 71553173 + MGP_129S1SvImJ_P0030409 Rpain protein_coding protein_coding MGP_129S1SvImJ_T0030410.1 MGP_129S1SvImJ_G0018619.1 mouse_genomes_project 11 71544802 71549915 + Rpain protein_coding retained_intron MGP_129S1SvImJ_T0030411.1 MGP_129S1SvImJ_G0018619.1 mouse_genomes_project 11 71547076 71553291 + Rpain protein_coding retained_intron MGP_129S1SvImJ_T0030412.1 MGP_129S1SvImJ_G0018619.1 mouse_genomes_project 11 71550225 71553287 + Rpain protein_coding retained_intron MGP_129S1SvImJ_T0031533.1 MGP_129S1SvImJ_G0018910.1 mouse_genomes_project 11 89368772 89375444 + MGP_129S1SvImJ_P0031533 Supt4a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031534.1 MGP_129S1SvImJ_G0018910.1 mouse_genomes_project 11 89368773 89375444 + MGP_129S1SvImJ_P0031534 Supt4a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031535.1 MGP_129S1SvImJ_G0018910.1 mouse_genomes_project 11 89368820 89375449 + MGP_129S1SvImJ_P0031535 Supt4a protein_coding protein_coding MGP_129S1SvImJ_T0006301.1 MGP_129S1SvImJ_G0005265.1 mouse_genomes_project 11 80903548 80904457 - 9130204K15Rik lincRNA lincRNA MGP_129S1SvImJ_T0006302.1 MGP_129S1SvImJ_G0005265.1 mouse_genomes_project 11 80903615 81000098 - 9130204K15Rik lincRNA lincRNA MGP_129S1SvImJ_T0006303.1 MGP_129S1SvImJ_G0005265.1 mouse_genomes_project 11 80904078 80988712 - 9130204K15Rik lincRNA lincRNA MGP_129S1SvImJ_T0006304.1 MGP_129S1SvImJ_G0005265.1 mouse_genomes_project 11 80919738 80928734 - 9130204K15Rik lincRNA lincRNA MGP_129S1SvImJ_T0012556.1 MGP_129S1SvImJ_G0010645.1 mouse_genomes_project 11 27332742 27332947 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032259.1 MGP_129S1SvImJ_G0019091.1 mouse_genomes_project 11 102049454 102053577 - MGP_129S1SvImJ_P0032259 Krt10 protein_coding protein_coding MGP_129S1SvImJ_T0006368.1 MGP_129S1SvImJ_G0005311.1 mouse_genomes_project 11 116581907 116582964 + 4933434M16Rik lincRNA lincRNA MGP_129S1SvImJ_T0006369.1 MGP_129S1SvImJ_G0005311.1 mouse_genomes_project 11 116581932 116589166 + 4933434M16Rik lincRNA lincRNA MGP_129S1SvImJ_T0029204.1 MGP_129S1SvImJ_G0018334.1 mouse_genomes_project 11 55598219 55614228 - MGP_129S1SvImJ_P0029204 Nmur2 protein_coding protein_coding MGP_129S1SvImJ_T0011337.1 MGP_129S1SvImJ_G0009453.1 mouse_genomes_project 11 121002625 121002798 - Gm27401 misc_RNA misc_RNA MGP_129S1SvImJ_T0030288.1 MGP_129S1SvImJ_G0018600.1 mouse_genomes_project 11 71053902 71055443 + MGP_129S1SvImJ_P0030288 Gltpd2 protein_coding protein_coding MGP_129S1SvImJ_T0030289.1 MGP_129S1SvImJ_G0018600.1 mouse_genomes_project 11 71054345 71055226 + MGP_129S1SvImJ_P0030289 Gltpd2 protein_coding protein_coding MGP_129S1SvImJ_T0006252.1 MGP_129S1SvImJ_G0005224.1 mouse_genomes_project 11 50291475 50302018 + 9230009I02Rik lincRNA lincRNA MGP_129S1SvImJ_T0033465.1 MGP_129S1SvImJ_G0019391.1 mouse_genomes_project 11 119524963 119546501 - MGP_129S1SvImJ_P0033465 Hn1 protein_coding protein_coding MGP_129S1SvImJ_T0033466.1 MGP_129S1SvImJ_G0019391.1 mouse_genomes_project 11 119525644 119546262 - Hn1 protein_coding processed_transcript MGP_129S1SvImJ_T0033467.1 MGP_129S1SvImJ_G0019391.1 mouse_genomes_project 11 119527934 119546462 - Hn1 protein_coding processed_transcript MGP_129S1SvImJ_T0033468.1 MGP_129S1SvImJ_G0019391.1 mouse_genomes_project 11 119530186 119546485 - Hn1 protein_coding processed_transcript MGP_129S1SvImJ_T0033469.1 MGP_129S1SvImJ_G0019391.1 mouse_genomes_project 11 119532793 119546230 - Hn1 protein_coding processed_transcript MGP_129S1SvImJ_T0029705.1 MGP_129S1SvImJ_G0018468.1 mouse_genomes_project 11 63227682 63258279 + MGP_129S1SvImJ_P0029705 Pmp22 protein_coding protein_coding MGP_129S1SvImJ_T0029706.1 MGP_129S1SvImJ_G0018468.1 mouse_genomes_project 11 63230212 63258280 + MGP_129S1SvImJ_P0029706 Pmp22 protein_coding protein_coding MGP_129S1SvImJ_T0029707.1 MGP_129S1SvImJ_G0018468.1 mouse_genomes_project 11 63231269 63257217 + MGP_129S1SvImJ_P0029707 Pmp22 protein_coding protein_coding MGP_129S1SvImJ_T0029708.1 MGP_129S1SvImJ_G0018468.1 mouse_genomes_project 11 63231503 63233190 + Pmp22 protein_coding processed_transcript MGP_129S1SvImJ_T0029709.1 MGP_129S1SvImJ_G0018468.1 mouse_genomes_project 11 63231768 63257299 + MGP_129S1SvImJ_P0029709 Pmp22 protein_coding protein_coding MGP_129S1SvImJ_T0003226.1 MGP_129S1SvImJ_G0002993.1 mouse_genomes_project 11 64224572 64228348 + 2810001G20Rik antisense antisense MGP_129S1SvImJ_T0003227.1 MGP_129S1SvImJ_G0002993.1 mouse_genomes_project 11 64224670 64228348 + 2810001G20Rik antisense antisense MGP_129S1SvImJ_T0029941.1 MGP_129S1SvImJ_G0018525.1 mouse_genomes_project 11 69720887 69721891 - Cntrob protein_coding retained_intron MGP_129S1SvImJ_T0029942.1 MGP_129S1SvImJ_G0018525.1 mouse_genomes_project 11 69720887 69745542 - MGP_129S1SvImJ_P0029942 Cntrob protein_coding protein_coding MGP_129S1SvImJ_T0029943.1 MGP_129S1SvImJ_G0018525.1 mouse_genomes_project 11 69720887 69745542 - MGP_129S1SvImJ_P0029943 Cntrob protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029944.1 MGP_129S1SvImJ_G0018525.1 mouse_genomes_project 11 69720940 69741076 - MGP_129S1SvImJ_P0029944 Cntrob protein_coding protein_coding MGP_129S1SvImJ_T0029945.1 MGP_129S1SvImJ_G0018525.1 mouse_genomes_project 11 69721101 69724543 - MGP_129S1SvImJ_P0029945 Cntrob protein_coding protein_coding MGP_129S1SvImJ_T0029946.1 MGP_129S1SvImJ_G0018525.1 mouse_genomes_project 11 69722917 69726360 - Cntrob protein_coding retained_intron MGP_129S1SvImJ_T0029947.1 MGP_129S1SvImJ_G0018525.1 mouse_genomes_project 11 69729793 69730822 - MGP_129S1SvImJ_P0029947 Cntrob protein_coding protein_coding MGP_129S1SvImJ_T0029948.1 MGP_129S1SvImJ_G0018525.1 mouse_genomes_project 11 69731423 69736508 - Cntrob protein_coding retained_intron MGP_129S1SvImJ_T0029949.1 MGP_129S1SvImJ_G0018525.1 mouse_genomes_project 11 69736146 69741841 - Cntrob protein_coding retained_intron MGP_129S1SvImJ_T0029950.1 MGP_129S1SvImJ_G0018525.1 mouse_genomes_project 11 69736562 69741094 - Cntrob protein_coding retained_intron MGP_129S1SvImJ_T0006394.1 MGP_129S1SvImJ_G0005329.1 mouse_genomes_project 11 123477130 123492541 - Gm11755 lincRNA lincRNA MGP_129S1SvImJ_T0006241.1 MGP_129S1SvImJ_G0005214.1 mouse_genomes_project 11 42761992 42952347 + Gm12153 lincRNA lincRNA MGP_129S1SvImJ_T0031211.1 MGP_129S1SvImJ_G0018829.1 mouse_genomes_project 11 84036620 84038211 + MGP_129S1SvImJ_P0031211 Zfp830 protein_coding protein_coding MGP_129S1SvImJ_T0012760.1 MGP_129S1SvImJ_G0010849.1 mouse_genomes_project 11 105749497 105750260 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032310.1 MGP_129S1SvImJ_G0019139.1 mouse_genomes_project 11 102839355 102843388 - MGP_129S1SvImJ_P0032310 Krt35 protein_coding protein_coding MGP_129S1SvImJ_T0032311.1 MGP_129S1SvImJ_G0019139.1 mouse_genomes_project 11 102839357 102843404 - Krt35 protein_coding retained_intron MGP_129S1SvImJ_T0012496.1 MGP_129S1SvImJ_G0010585.1 mouse_genomes_project 11 7636305 7636618 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032114.1 MGP_129S1SvImJ_G0019053.1 mouse_genomes_project 11 100855464 100859688 - MGP_129S1SvImJ_P0032114 Neurod2 protein_coding protein_coding MGP_129S1SvImJ_T0030205.1 MGP_129S1SvImJ_G0018580.1 mouse_genomes_project 11 70556843 70563671 + MGP_129S1SvImJ_P0030205 Asgr1 protein_coding protein_coding MGP_129S1SvImJ_T0030206.1 MGP_129S1SvImJ_G0018580.1 mouse_genomes_project 11 70557113 70563671 + MGP_129S1SvImJ_P0030206 Asgr1 protein_coding protein_coding MGP_129S1SvImJ_T0030207.1 MGP_129S1SvImJ_G0018580.1 mouse_genomes_project 11 70557113 70563668 + MGP_129S1SvImJ_P0030207 Asgr1 protein_coding protein_coding MGP_129S1SvImJ_T0030208.1 MGP_129S1SvImJ_G0018580.1 mouse_genomes_project 11 70557456 70563671 + MGP_129S1SvImJ_P0030208 Asgr1 protein_coding protein_coding MGP_129S1SvImJ_T0030209.1 MGP_129S1SvImJ_G0018580.1 mouse_genomes_project 11 70558637 70563147 + MGP_129S1SvImJ_P0030209 Asgr1 protein_coding protein_coding MGP_129S1SvImJ_T0028899.1 MGP_129S1SvImJ_G0018256.1 mouse_genomes_project 11 50094796 50106895 - MGP_129S1SvImJ_P0028899 Zfp2 protein_coding protein_coding MGP_129S1SvImJ_T0028900.1 MGP_129S1SvImJ_G0018256.1 mouse_genomes_project 11 50094796 50112227 - MGP_129S1SvImJ_P0028900 Zfp2 protein_coding protein_coding MGP_129S1SvImJ_T0028901.1 MGP_129S1SvImJ_G0018256.1 mouse_genomes_project 11 50095143 50112250 - MGP_129S1SvImJ_P0028901 Zfp2 protein_coding protein_coding MGP_129S1SvImJ_T0028902.1 MGP_129S1SvImJ_G0018256.1 mouse_genomes_project 11 50097331 50112216 - Zfp2 protein_coding processed_transcript MGP_129S1SvImJ_T0028903.1 MGP_129S1SvImJ_G0018256.1 mouse_genomes_project 11 50101268 50112237 - Zfp2 protein_coding processed_transcript MGP_129S1SvImJ_T0028904.1 MGP_129S1SvImJ_G0018256.1 mouse_genomes_project 11 50102074 50112219 - Zfp2 protein_coding processed_transcript MGP_129S1SvImJ_T0032939.1 MGP_129S1SvImJ_G0019274.1 mouse_genomes_project 11 107376859 107479744 + MGP_129S1SvImJ_P0032939 protein_coding protein_coding MGP_129S1SvImJ_T0032940.1 MGP_129S1SvImJ_G0019274.1 mouse_genomes_project 11 107376948 107440923 + protein_coding retained_intron MGP_129S1SvImJ_T0032941.1 MGP_129S1SvImJ_G0019274.1 mouse_genomes_project 11 107376953 107452095 + MGP_129S1SvImJ_P0032941 protein_coding protein_coding MGP_129S1SvImJ_T0032942.1 MGP_129S1SvImJ_G0019274.1 mouse_genomes_project 11 107376984 107476091 + MGP_129S1SvImJ_P0032942 protein_coding protein_coding MGP_129S1SvImJ_T0032943.1 MGP_129S1SvImJ_G0019274.1 mouse_genomes_project 11 107377042 107452179 + MGP_129S1SvImJ_P0032943 protein_coding protein_coding MGP_129S1SvImJ_T0032944.1 MGP_129S1SvImJ_G0019274.1 mouse_genomes_project 11 107377048 107452155 + protein_coding processed_transcript MGP_129S1SvImJ_T0032945.1 MGP_129S1SvImJ_G0019274.1 mouse_genomes_project 11 107377050 107440530 + MGP_129S1SvImJ_P0032945 protein_coding protein_coding MGP_129S1SvImJ_T0032946.1 MGP_129S1SvImJ_G0019274.1 mouse_genomes_project 11 107377053 107475876 + MGP_129S1SvImJ_P0032946 protein_coding protein_coding MGP_129S1SvImJ_T0032947.1 MGP_129S1SvImJ_G0019274.1 mouse_genomes_project 11 107428471 107475844 + MGP_129S1SvImJ_P0032947 protein_coding protein_coding MGP_129S1SvImJ_T0032948.1 MGP_129S1SvImJ_G0019274.1 mouse_genomes_project 11 107428471 107475844 + MGP_129S1SvImJ_P0032948 protein_coding protein_coding MGP_129S1SvImJ_T0032949.1 MGP_129S1SvImJ_G0019274.1 mouse_genomes_project 11 107463446 107475898 + protein_coding processed_transcript MGP_129S1SvImJ_T0032950.1 MGP_129S1SvImJ_G0019274.1 mouse_genomes_project 11 107467372 107475867 + protein_coding processed_transcript MGP_129S1SvImJ_T0030977.1 MGP_129S1SvImJ_G0018766.1 mouse_genomes_project 11 79158340 79162110 + MGP_129S1SvImJ_P0030977 Tlcd1 protein_coding protein_coding MGP_129S1SvImJ_T0030978.1 MGP_129S1SvImJ_G0018766.1 mouse_genomes_project 11 79159759 79161252 + MGP_129S1SvImJ_P0030978 Tlcd1 protein_coding protein_coding MGP_129S1SvImJ_T0030979.1 MGP_129S1SvImJ_G0018766.1 mouse_genomes_project 11 79159778 79161784 + Tlcd1 protein_coding processed_transcript MGP_129S1SvImJ_T0030980.1 MGP_129S1SvImJ_G0018766.1 mouse_genomes_project 11 79160280 79163539 + MGP_129S1SvImJ_P0030980 Tlcd1 protein_coding protein_coding MGP_129S1SvImJ_T0030981.1 MGP_129S1SvImJ_G0018766.1 mouse_genomes_project 11 79160314 79162450 + MGP_129S1SvImJ_P0030981 Tlcd1 protein_coding protein_coding MGP_129S1SvImJ_T0030982.1 MGP_129S1SvImJ_G0018766.1 mouse_genomes_project 11 79160360 79161237 + Tlcd1 protein_coding retained_intron MGP_129S1SvImJ_T0030983.1 MGP_129S1SvImJ_G0018766.1 mouse_genomes_project 11 79160391 79161505 + MGP_129S1SvImJ_P0030983 Tlcd1 protein_coding protein_coding MGP_129S1SvImJ_T0030984.1 MGP_129S1SvImJ_G0018766.1 mouse_genomes_project 11 79160902 79161721 + Tlcd1 protein_coding retained_intron MGP_129S1SvImJ_T0031205.1 MGP_129S1SvImJ_G0018827.1 mouse_genomes_project 11 83643453 83702255 + MGP_129S1SvImJ_P0031205 Tmem132e protein_coding protein_coding MGP_129S1SvImJ_T0031206.1 MGP_129S1SvImJ_G0018827.1 mouse_genomes_project 11 83643453 83702260 + MGP_129S1SvImJ_P0031206 Tmem132e protein_coding protein_coding MGP_129S1SvImJ_T0031207.1 MGP_129S1SvImJ_G0018827.1 mouse_genomes_project 11 83643676 83690651 + Tmem132e protein_coding processed_transcript MGP_129S1SvImJ_T0031208.1 MGP_129S1SvImJ_G0018827.1 mouse_genomes_project 11 83694184 83698827 + Tmem132e protein_coding retained_intron MGP_129S1SvImJ_T0031316.1 MGP_129S1SvImJ_G0018863.1 mouse_genomes_project 11 85333255 85355217 + MGP_129S1SvImJ_P0031316 Ddx52 protein_coding protein_coding MGP_129S1SvImJ_T0031317.1 MGP_129S1SvImJ_G0018863.1 mouse_genomes_project 11 85338397 85344298 + Ddx52 protein_coding processed_transcript MGP_129S1SvImJ_T0028403.1 MGP_129S1SvImJ_G0018114.1 mouse_genomes_project 11 28502628 28551097 - MGP_129S1SvImJ_P0028403 4930505A04Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028404.1 MGP_129S1SvImJ_G0018114.1 mouse_genomes_project 11 28502628 28551078 - MGP_129S1SvImJ_P0028404 4930505A04Rik protein_coding protein_coding MGP_129S1SvImJ_T0099221.1 MGP_129S1SvImJ_G0037288.1 mouse_genomes_project 11 5109484 5109546 - Gm27393 snRNA snRNA MGP_129S1SvImJ_T0100514.1 MGP_129S1SvImJ_G0038581.1 mouse_genomes_project 11 72447838 72447969 - Gm22927 snoRNA snoRNA MGP_129S1SvImJ_T0031840.1 MGP_129S1SvImJ_G0018985.1 mouse_genomes_project 11 97773956 97792876 - MGP_129S1SvImJ_P0031840 Ngfr protein_coding protein_coding MGP_129S1SvImJ_T0003252.1 MGP_129S1SvImJ_G0003014.1 mouse_genomes_project 11 80085472 80096014 + Gm11201 antisense antisense MGP_129S1SvImJ_T0031847.1 MGP_129S1SvImJ_G0018987.1 mouse_genomes_project 11 97933882 98004297 + MGP_129S1SvImJ_P0031847 Zfp652 protein_coding protein_coding MGP_129S1SvImJ_T0031848.1 MGP_129S1SvImJ_G0018987.1 mouse_genomes_project 11 97936311 98074072 + MGP_129S1SvImJ_P0031848 Zfp652 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031850.1 MGP_129S1SvImJ_G0018987.1 mouse_genomes_project 11 97979920 98004297 + MGP_129S1SvImJ_P0031850 Zfp652 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031851.1 MGP_129S1SvImJ_G0018987.1 mouse_genomes_project 11 97979987 97996655 + MGP_129S1SvImJ_P0031851 Zfp652 protein_coding protein_coding MGP_129S1SvImJ_T0011814.1 MGP_129S1SvImJ_G0009927.1 mouse_genomes_project 11 59462979 59464239 + MGP_129S1SvImJ_P0011814 Olfr225 polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0030234.1 MGP_129S1SvImJ_G0018586.1 mouse_genomes_project 11 70744664 70750093 - MGP_129S1SvImJ_P0030234 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0030235.1 MGP_129S1SvImJ_G0018586.1 mouse_genomes_project 11 70749080 70750218 - MGP_129S1SvImJ_P0030235 protein_coding protein_coding MGP_129S1SvImJ_T0030236.1 MGP_129S1SvImJ_G0018586.1 mouse_genomes_project 11 70749149 70750339 - protein_coding retained_intron MGP_129S1SvImJ_T0032212.1 MGP_129S1SvImJ_G0019077.1 mouse_genomes_project 11 101531839 101551413 + MGP_129S1SvImJ_P0032212 Cdc6 protein_coding protein_coding MGP_129S1SvImJ_T0032213.1 MGP_129S1SvImJ_G0019077.1 mouse_genomes_project 11 101531887 101551415 + MGP_129S1SvImJ_P0032213 Cdc6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032214.1 MGP_129S1SvImJ_G0019077.1 mouse_genomes_project 11 101532189 101548262 + MGP_129S1SvImJ_P0032214 Cdc6 protein_coding protein_coding MGP_129S1SvImJ_T0032215.1 MGP_129S1SvImJ_G0019077.1 mouse_genomes_project 11 101544512 101547830 + Cdc6 protein_coding retained_intron MGP_129S1SvImJ_T0012634.1 MGP_129S1SvImJ_G0010723.1 mouse_genomes_project 11 57596998 57597342 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028054.1 MGP_129S1SvImJ_G0018039.1 mouse_genomes_project 11 6282904 6305697 + MGP_129S1SvImJ_P0028054 Gm11992 protein_coding protein_coding MGP_129S1SvImJ_T0033068.1 MGP_129S1SvImJ_G0019302.1 mouse_genomes_project 11 109566711 109579659 + MGP_129S1SvImJ_P0033068 Tcam1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033069.1 MGP_129S1SvImJ_G0019302.1 mouse_genomes_project 11 109566787 109580271 + MGP_129S1SvImJ_P0033069 Tcam1 protein_coding protein_coding MGP_129S1SvImJ_T0034061.1 MGP_129S1SvImJ_G0019502.1 mouse_genomes_project 11 124925819 124932293 + MGP_129S1SvImJ_P0034061 Ccdc137 protein_coding protein_coding MGP_129S1SvImJ_T0034062.1 MGP_129S1SvImJ_G0019502.1 mouse_genomes_project 11 124925830 124927074 + Ccdc137 protein_coding processed_transcript MGP_129S1SvImJ_T0034063.1 MGP_129S1SvImJ_G0019502.1 mouse_genomes_project 11 124925842 124926550 + Ccdc137 protein_coding retained_intron MGP_129S1SvImJ_T0034064.1 MGP_129S1SvImJ_G0019502.1 mouse_genomes_project 11 124925846 124927816 + MGP_129S1SvImJ_P0034064 Ccdc137 protein_coding protein_coding MGP_129S1SvImJ_T0034065.1 MGP_129S1SvImJ_G0019502.1 mouse_genomes_project 11 124925851 124930351 + MGP_129S1SvImJ_P0034065 Ccdc137 protein_coding protein_coding MGP_129S1SvImJ_T0034066.1 MGP_129S1SvImJ_G0019502.1 mouse_genomes_project 11 124925890 124927709 + Ccdc137 protein_coding processed_transcript MGP_129S1SvImJ_T0034067.1 MGP_129S1SvImJ_G0019502.1 mouse_genomes_project 11 124927505 124930467 + Ccdc137 protein_coding retained_intron MGP_129S1SvImJ_T0034068.1 MGP_129S1SvImJ_G0019502.1 mouse_genomes_project 11 124930400 124932292 + Ccdc137 protein_coding processed_transcript MGP_129S1SvImJ_T0029134.1 MGP_129S1SvImJ_G0018316.1 mouse_genomes_project 11 53911800 53996347 + MGP_129S1SvImJ_P0029134 Fnip1 protein_coding protein_coding MGP_129S1SvImJ_T0029135.1 MGP_129S1SvImJ_G0018316.1 mouse_genomes_project 11 53939429 53980197 + MGP_129S1SvImJ_P0029135 Fnip1 protein_coding protein_coding MGP_129S1SvImJ_T0006205.1 MGP_129S1SvImJ_G0005184.1 mouse_genomes_project 11 20430902 20434802 + Gm12056 lincRNA lincRNA MGP_129S1SvImJ_T0030601.1 MGP_129S1SvImJ_G0018679.1 mouse_genomes_project 11 74633959 74635009 + MGP_129S1SvImJ_P0030601 Olfr23 protein_coding protein_coding MGP_129S1SvImJ_T0012770.1 MGP_129S1SvImJ_G0010859.1 mouse_genomes_project 11 109029812 109031079 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031105.1 MGP_129S1SvImJ_G0018798.1 mouse_genomes_project 11 80621787 80639002 - MGP_129S1SvImJ_P0031105 protein_coding protein_coding MGP_129S1SvImJ_T0031106.1 MGP_129S1SvImJ_G0018798.1 mouse_genomes_project 11 80621787 80638972 - MGP_129S1SvImJ_P0031106 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0006215.1 MGP_129S1SvImJ_G0005193.1 mouse_genomes_project 11 23047157 23195784 + 4933427E13Rik lincRNA lincRNA MGP_129S1SvImJ_T0006217.1 MGP_129S1SvImJ_G0005193.1 mouse_genomes_project 11 23152058 23195788 + 4933427E13Rik lincRNA lincRNA MGP_129S1SvImJ_T0006218.1 MGP_129S1SvImJ_G0005193.1 mouse_genomes_project 11 23152087 23156679 + 4933427E13Rik lincRNA lincRNA MGP_129S1SvImJ_T0006219.1 MGP_129S1SvImJ_G0005193.1 mouse_genomes_project 11 23155917 23186841 + 4933427E13Rik lincRNA lincRNA MGP_129S1SvImJ_T0028442.1 MGP_129S1SvImJ_G0018126.1 mouse_genomes_project 11 30371838 30394398 - MGP_129S1SvImJ_P0028442 Il9r protein_coding protein_coding MGP_129S1SvImJ_T0028443.1 MGP_129S1SvImJ_G0018126.1 mouse_genomes_project 11 30373294 30394455 - MGP_129S1SvImJ_P0028443 Il9r protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028444.1 MGP_129S1SvImJ_G0018126.1 mouse_genomes_project 11 30374580 30394412 - MGP_129S1SvImJ_P0028444 Il9r protein_coding protein_coding MGP_129S1SvImJ_T0028445.1 MGP_129S1SvImJ_G0018126.1 mouse_genomes_project 11 30374796 30394398 - MGP_129S1SvImJ_P0028445 Il9r protein_coding protein_coding MGP_129S1SvImJ_T0028446.1 MGP_129S1SvImJ_G0018126.1 mouse_genomes_project 11 30380647 30394455 - Il9r protein_coding retained_intron MGP_129S1SvImJ_T0011820.1 MGP_129S1SvImJ_G0009932.1 mouse_genomes_project 11 74644789 74645726 + MGP_129S1SvImJ_P0011820 Olfr22-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0028137.1 MGP_129S1SvImJ_G0018056.1 mouse_genomes_project 11 14557312 14602189 + MGP_129S1SvImJ_P0028137 Ppp3r1 protein_coding protein_coding MGP_129S1SvImJ_T0028139.1 MGP_129S1SvImJ_G0018056.1 mouse_genomes_project 11 14594672 14596938 + Ppp3r1 protein_coding processed_transcript MGP_129S1SvImJ_T0031889.1 MGP_129S1SvImJ_G0019000.1 mouse_genomes_project 11 98494301 98497433 + MGP_129S1SvImJ_P0031889 Hoxb13 protein_coding protein_coding MGP_129S1SvImJ_T0101614.1 MGP_129S1SvImJ_G0039659.1 mouse_genomes_project 11 107729077 107730407 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0006342.1 MGP_129S1SvImJ_G0005291.1 mouse_genomes_project 11 98476275 98477525 + Gm11535 lincRNA lincRNA MGP_129S1SvImJ_T0028675.1 MGP_129S1SvImJ_G0018187.1 mouse_genomes_project 11 44866009 44901174 + MGP_129S1SvImJ_P0028675 Sox30 protein_coding protein_coding MGP_129S1SvImJ_T0031955.1 MGP_129S1SvImJ_G0019016.1 mouse_genomes_project 11 99300304 99301693 + Prr15l protein_coding processed_transcript MGP_129S1SvImJ_T0031956.1 MGP_129S1SvImJ_G0019016.1 mouse_genomes_project 11 99301502 99307650 + MGP_129S1SvImJ_P0031956 Prr15l protein_coding protein_coding MGP_129S1SvImJ_T0031957.1 MGP_129S1SvImJ_G0019016.1 mouse_genomes_project 11 99301524 99309832 + MGP_129S1SvImJ_P0031957 Prr15l protein_coding protein_coding MGP_129S1SvImJ_T0031958.1 MGP_129S1SvImJ_G0019016.1 mouse_genomes_project 11 99301594 99307645 + MGP_129S1SvImJ_P0031958 Prr15l protein_coding protein_coding MGP_129S1SvImJ_T0031959.1 MGP_129S1SvImJ_G0019016.1 mouse_genomes_project 11 99303398 99307282 + MGP_129S1SvImJ_P0031959 Prr15l protein_coding protein_coding MGP_129S1SvImJ_T0030651.1 MGP_129S1SvImJ_G0018699.1 mouse_genomes_project 11 75545245 75562004 + MGP_129S1SvImJ_P0030651 protein_coding protein_coding MGP_129S1SvImJ_T0030652.1 MGP_129S1SvImJ_G0018699.1 mouse_genomes_project 11 75551999 75553397 + protein_coding retained_intron MGP_129S1SvImJ_T0030653.1 MGP_129S1SvImJ_G0018699.1 mouse_genomes_project 11 75553141 75560058 + MGP_129S1SvImJ_P0030653 protein_coding protein_coding MGP_129S1SvImJ_T0028174.1 MGP_129S1SvImJ_G0018068.1 mouse_genomes_project 11 18237379 18297708 - MGP_129S1SvImJ_P0028174 Aftph protein_coding protein_coding MGP_129S1SvImJ_T0028175.1 MGP_129S1SvImJ_G0018068.1 mouse_genomes_project 11 18237379 18283731 - MGP_129S1SvImJ_P0028175 Aftph protein_coding protein_coding MGP_129S1SvImJ_T0028176.1 MGP_129S1SvImJ_G0018068.1 mouse_genomes_project 11 18238011 18283266 - MGP_129S1SvImJ_P0028176 Aftph protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028177.1 MGP_129S1SvImJ_G0018068.1 mouse_genomes_project 11 18238037 18297574 - MGP_129S1SvImJ_P0028177 Aftph protein_coding protein_coding MGP_129S1SvImJ_T0028178.1 MGP_129S1SvImJ_G0018068.1 mouse_genomes_project 11 18238276 18245098 - Aftph protein_coding retained_intron MGP_129S1SvImJ_T0028179.1 MGP_129S1SvImJ_G0018068.1 mouse_genomes_project 11 18238413 18282296 - MGP_129S1SvImJ_P0028179 Aftph protein_coding protein_coding MGP_129S1SvImJ_T0028180.1 MGP_129S1SvImJ_G0018068.1 mouse_genomes_project 11 18248305 18266353 - Aftph protein_coding retained_intron MGP_129S1SvImJ_T0028181.1 MGP_129S1SvImJ_G0018068.1 mouse_genomes_project 11 18255982 18266279 - Aftph protein_coding retained_intron MGP_129S1SvImJ_T0028182.1 MGP_129S1SvImJ_G0018068.1 mouse_genomes_project 11 18262655 18266259 - Aftph protein_coding retained_intron MGP_129S1SvImJ_T0012489.1 MGP_129S1SvImJ_G0010578.1 mouse_genomes_project 11 3987468 3987782 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012747.1 MGP_129S1SvImJ_G0010836.1 mouse_genomes_project 11 102373522 102374544 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032325.1 MGP_129S1SvImJ_G0019147.1 mouse_genomes_project 11 103015232 103020045 - MGP_129S1SvImJ_P0032325 Krt17 protein_coding protein_coding MGP_129S1SvImJ_T0027863.1 MGP_129S1SvImJ_G0017995.1 mouse_genomes_project 11 2078238 2080478 + MGP_129S1SvImJ_P0027863 Rasl10a protein_coding protein_coding MGP_129S1SvImJ_T0027864.1 MGP_129S1SvImJ_G0017995.1 mouse_genomes_project 11 2079050 2080155 + Rasl10a protein_coding processed_transcript MGP_129S1SvImJ_T0009744.1 MGP_129S1SvImJ_G0007860.1 mouse_genomes_project 11 90070823 90070915 + Mir378b miRNA miRNA MGP_129S1SvImJ_T0030876.1 MGP_129S1SvImJ_G0018747.1 mouse_genomes_project 11 78374183 78381180 - MGP_129S1SvImJ_P0030876 Ankrd13b protein_coding protein_coding MGP_129S1SvImJ_T0030877.1 MGP_129S1SvImJ_G0018747.1 mouse_genomes_project 11 78374183 78394410 - MGP_129S1SvImJ_P0030877 Ankrd13b protein_coding protein_coding MGP_129S1SvImJ_T0030878.1 MGP_129S1SvImJ_G0018747.1 mouse_genomes_project 11 78374185 78377324 - Ankrd13b protein_coding retained_intron MGP_129S1SvImJ_T0030879.1 MGP_129S1SvImJ_G0018747.1 mouse_genomes_project 11 78374185 78394422 - MGP_129S1SvImJ_P0030879 Ankrd13b protein_coding protein_coding MGP_129S1SvImJ_T0030880.1 MGP_129S1SvImJ_G0018747.1 mouse_genomes_project 11 78375813 78381509 - Ankrd13b protein_coding retained_intron MGP_129S1SvImJ_T0030881.1 MGP_129S1SvImJ_G0018747.1 mouse_genomes_project 11 78376470 78380991 - MGP_129S1SvImJ_P0030881 Ankrd13b protein_coding protein_coding MGP_129S1SvImJ_T0029043.1 MGP_129S1SvImJ_G0018295.1 mouse_genomes_project 11 52855741 52856472 - MGP_129S1SvImJ_P0029043 Gm9837 protein_coding protein_coding MGP_129S1SvImJ_T0003163.1 MGP_129S1SvImJ_G0002938.1 mouse_genomes_project 11 41944885 42006743 - Gm12146 antisense antisense MGP_129S1SvImJ_T0032575.1 MGP_129S1SvImJ_G0019204.1 mouse_genomes_project 11 104326771 104334237 - MGP_129S1SvImJ_P0032575 Vat1 protein_coding protein_coding MGP_129S1SvImJ_T0028968.1 MGP_129S1SvImJ_G0018276.1 mouse_genomes_project 11 51032074 51061541 + MGP_129S1SvImJ_P0028968 Sar1b protein_coding protein_coding MGP_129S1SvImJ_T0028969.1 MGP_129S1SvImJ_G0018276.1 mouse_genomes_project 11 51032081 51051134 + Sar1b protein_coding processed_transcript MGP_129S1SvImJ_T0098729.1 MGP_129S1SvImJ_G0036814.1 mouse_genomes_project 11 69774686 69774830 - Gm22442 scaRNA scaRNA MGP_129S1SvImJ_T0030691.1 MGP_129S1SvImJ_G0018707.1 mouse_genomes_project 11 75930339 76008341 + MGP_129S1SvImJ_P0030691 Rtn4rl1 protein_coding protein_coding MGP_129S1SvImJ_T0030467.1 MGP_129S1SvImJ_G0018631.1 mouse_genomes_project 11 72821850 72824739 - MGP_129S1SvImJ_P0030467 Gm43951 protein_coding protein_coding MGP_129S1SvImJ_T0030089.1 MGP_129S1SvImJ_G0018562.1 mouse_genomes_project 11 70334042 70343545 - MGP_129S1SvImJ_P0030089 Tnk1 protein_coding protein_coding MGP_129S1SvImJ_T0030090.1 MGP_129S1SvImJ_G0018562.1 mouse_genomes_project 11 70334256 70341932 - MGP_129S1SvImJ_P0030090 Tnk1 protein_coding protein_coding MGP_129S1SvImJ_T0030091.1 MGP_129S1SvImJ_G0018562.1 mouse_genomes_project 11 70335112 70340397 - MGP_129S1SvImJ_P0030091 Tnk1 protein_coding protein_coding MGP_129S1SvImJ_T0030092.1 MGP_129S1SvImJ_G0018562.1 mouse_genomes_project 11 70337995 70343545 - MGP_129S1SvImJ_P0030092 Tnk1 protein_coding protein_coding MGP_129S1SvImJ_T0030093.1 MGP_129S1SvImJ_G0018562.1 mouse_genomes_project 11 70340375 70343523 - MGP_129S1SvImJ_P0030093 Tnk1 protein_coding protein_coding MGP_129S1SvImJ_T0006250.1 MGP_129S1SvImJ_G0005222.1 mouse_genomes_project 11 45559696 45568128 - Gm4926 lincRNA lincRNA MGP_129S1SvImJ_T0032672.1 MGP_129S1SvImJ_G0019223.1 mouse_genomes_project 11 105103111 105106970 - MGP_129S1SvImJ_P0032672 Tmem101 protein_coding protein_coding MGP_129S1SvImJ_T0032673.1 MGP_129S1SvImJ_G0019223.1 mouse_genomes_project 11 105104739 105106913 - Tmem101 protein_coding processed_transcript MGP_129S1SvImJ_T0032674.1 MGP_129S1SvImJ_G0019223.1 mouse_genomes_project 11 105106380 105106921 - Tmem101 protein_coding processed_transcript MGP_129S1SvImJ_T0032669.1 MGP_129S1SvImJ_G0019222.1 mouse_genomes_project 11 105096117 105100066 + Nags protein_coding processed_transcript MGP_129S1SvImJ_T0032670.1 MGP_129S1SvImJ_G0019222.1 mouse_genomes_project 11 105096153 105100066 + MGP_129S1SvImJ_P0032670 Nags protein_coding protein_coding MGP_129S1SvImJ_T0032671.1 MGP_129S1SvImJ_G0019222.1 mouse_genomes_project 11 105096958 105100066 + Nags protein_coding processed_transcript MGP_129S1SvImJ_T0012638.1 MGP_129S1SvImJ_G0010727.1 mouse_genomes_project 11 58123066 58123285 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029499.1 MGP_129S1SvImJ_G0018429.1 mouse_genomes_project 11 60827523 60839057 - MGP_129S1SvImJ_P0029499 Natd1 protein_coding protein_coding MGP_129S1SvImJ_T0029500.1 MGP_129S1SvImJ_G0018429.1 mouse_genomes_project 11 60831231 60839995 - Natd1 protein_coding processed_transcript MGP_129S1SvImJ_T0029522.1 MGP_129S1SvImJ_G0018434.1 mouse_genomes_project 11 61158165 61162962 + MGP_129S1SvImJ_P0029522 Aldh3a1 protein_coding protein_coding MGP_129S1SvImJ_T0029523.1 MGP_129S1SvImJ_G0018434.1 mouse_genomes_project 11 61159249 61169047 + MGP_129S1SvImJ_P0029523 Aldh3a1 protein_coding protein_coding MGP_129S1SvImJ_T0029524.1 MGP_129S1SvImJ_G0018434.1 mouse_genomes_project 11 61159373 61169047 + MGP_129S1SvImJ_P0029524 Aldh3a1 protein_coding protein_coding MGP_129S1SvImJ_T0012633.1 MGP_129S1SvImJ_G0010722.1 mouse_genomes_project 11 57596994 57597342 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028347.1 MGP_129S1SvImJ_G0018105.1 mouse_genomes_project 11 27218890 27244666 - MGP_129S1SvImJ_P0028347 Cfap36 protein_coding protein_coding MGP_129S1SvImJ_T0028348.1 MGP_129S1SvImJ_G0018105.1 mouse_genomes_project 11 27223130 27244545 - Cfap36 protein_coding retained_intron MGP_129S1SvImJ_T0028349.1 MGP_129S1SvImJ_G0018105.1 mouse_genomes_project 11 27227983 27244179 - MGP_129S1SvImJ_P0028349 Cfap36 protein_coding protein_coding MGP_129S1SvImJ_T0028350.1 MGP_129S1SvImJ_G0018105.1 mouse_genomes_project 11 27241071 27244325 - Cfap36 protein_coding retained_intron MGP_129S1SvImJ_T0028351.1 MGP_129S1SvImJ_G0018105.1 mouse_genomes_project 11 27241980 27244449 - Cfap36 protein_coding retained_intron MGP_129S1SvImJ_T0032841.1 MGP_129S1SvImJ_G0019249.1 mouse_genomes_project 11 105917886 105927231 - MGP_129S1SvImJ_P0032841 Gfap protein_coding protein_coding MGP_129S1SvImJ_T0032842.1 MGP_129S1SvImJ_G0019249.1 mouse_genomes_project 11 105920651 105927300 - MGP_129S1SvImJ_P0032842 Gfap protein_coding protein_coding MGP_129S1SvImJ_T0032843.1 MGP_129S1SvImJ_G0019249.1 mouse_genomes_project 11 105924576 105931017 - Gfap protein_coding processed_transcript MGP_129S1SvImJ_T0012673.1 MGP_129S1SvImJ_G0010762.1 mouse_genomes_project 11 70962320 70962858 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006402.1 MGP_129S1SvImJ_G0005337.1 mouse_genomes_project 11 126373354 126373557 + Gm29513 lincRNA lincRNA MGP_129S1SvImJ_T0099258.1 MGP_129S1SvImJ_G0037325.1 mouse_genomes_project 11 77837107 77837257 + Gm22611 snRNA snRNA MGP_129S1SvImJ_T0033024.1 MGP_129S1SvImJ_G0019290.1 mouse_genomes_project 11 109277389 109299321 + MGP_129S1SvImJ_P0033024 Kcnh6 protein_coding protein_coding MGP_129S1SvImJ_T0033025.1 MGP_129S1SvImJ_G0019290.1 mouse_genomes_project 11 109277438 109299763 + MGP_129S1SvImJ_P0033025 Kcnh6 protein_coding protein_coding MGP_129S1SvImJ_T0033026.1 MGP_129S1SvImJ_G0019290.1 mouse_genomes_project 11 109277468 109299278 + MGP_129S1SvImJ_P0033026 Kcnh6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033027.1 MGP_129S1SvImJ_G0019290.1 mouse_genomes_project 11 109283037 109286737 + Kcnh6 protein_coding processed_transcript MGP_129S1SvImJ_T0011328.1 MGP_129S1SvImJ_G0009444.1 mouse_genomes_project 11 87883943 87884046 + Gm25427 misc_RNA misc_RNA MGP_129S1SvImJ_T0006243.1 MGP_129S1SvImJ_G0005216.1 mouse_genomes_project 11 43434375 43439177 + 4930597A21Rik lincRNA lincRNA MGP_129S1SvImJ_T0031880.1 MGP_129S1SvImJ_G0018997.1 mouse_genomes_project 11 98346843 98354870 - MGP_129S1SvImJ_P0031880 Atp5g1 protein_coding protein_coding MGP_129S1SvImJ_T0031881.1 MGP_129S1SvImJ_G0018997.1 mouse_genomes_project 11 98346858 98354237 - MGP_129S1SvImJ_P0031881 Atp5g1 protein_coding protein_coding MGP_129S1SvImJ_T0031882.1 MGP_129S1SvImJ_G0018997.1 mouse_genomes_project 11 98350978 98354781 - MGP_129S1SvImJ_P0031882 Atp5g1 protein_coding protein_coding MGP_129S1SvImJ_T0031883.1 MGP_129S1SvImJ_G0018997.1 mouse_genomes_project 11 98351095 98354863 - MGP_129S1SvImJ_P0031883 Atp5g1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0031884.1 MGP_129S1SvImJ_G0018997.1 mouse_genomes_project 11 98352189 98354819 - MGP_129S1SvImJ_P0031884 Atp5g1 protein_coding protein_coding MGP_129S1SvImJ_T0012786.1 MGP_129S1SvImJ_G0010875.1 mouse_genomes_project 11 118587023 118587325 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006347.1 MGP_129S1SvImJ_G0005293.1 mouse_genomes_project 11 99054979 99091884 - 2010300F17Rik lincRNA lincRNA MGP_129S1SvImJ_T0006348.1 MGP_129S1SvImJ_G0005293.1 mouse_genomes_project 11 99090479 99091858 - 2010300F17Rik lincRNA lincRNA MGP_129S1SvImJ_T0003236.1 MGP_129S1SvImJ_G0003000.1 mouse_genomes_project 11 69463601 69466359 - 9330160F10Rik antisense antisense MGP_129S1SvImJ_T0012767.1 MGP_129S1SvImJ_G0010856.1 mouse_genomes_project 11 108240033 108240722 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0030027.1 MGP_129S1SvImJ_G0018546.1 mouse_genomes_project 11 70123841 70131331 - Eif4a1 protein_coding retained_intron MGP_129S1SvImJ_T0030028.1 MGP_129S1SvImJ_G0018546.1 mouse_genomes_project 11 70123841 70131331 - MGP_129S1SvImJ_P0030028 Eif4a1 protein_coding protein_coding MGP_129S1SvImJ_T0030029.1 MGP_129S1SvImJ_G0018546.1 mouse_genomes_project 11 70123842 70131331 - Eif4a1 protein_coding retained_intron MGP_129S1SvImJ_T0030030.1 MGP_129S1SvImJ_G0018546.1 mouse_genomes_project 11 70125241 70126719 - Eif4a1 protein_coding processed_transcript MGP_129S1SvImJ_T0030031.1 MGP_129S1SvImJ_G0018546.1 mouse_genomes_project 11 70125312 70126945 - Eif4a1 protein_coding processed_transcript MGP_129S1SvImJ_T0030032.1 MGP_129S1SvImJ_G0018546.1 mouse_genomes_project 11 70127137 70131437 - MGP_129S1SvImJ_P0030032 Eif4a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030033.1 MGP_129S1SvImJ_G0018546.1 mouse_genomes_project 11 70128168 70131330 - Eif4a1 protein_coding processed_transcript MGP_129S1SvImJ_T0030034.1 MGP_129S1SvImJ_G0018546.1 mouse_genomes_project 11 70128176 70129897 - Eif4a1 protein_coding processed_transcript MGP_129S1SvImJ_T0030035.1 MGP_129S1SvImJ_G0018546.1 mouse_genomes_project 11 70129146 70131329 - Eif4a1 protein_coding processed_transcript MGP_129S1SvImJ_T0030036.1 MGP_129S1SvImJ_G0018546.1 mouse_genomes_project 11 70129193 70130744 - Eif4a1 protein_coding processed_transcript MGP_129S1SvImJ_T0030037.1 MGP_129S1SvImJ_G0018546.1 mouse_genomes_project 11 70129261 70130236 - Eif4a1 protein_coding retained_intron MGP_129S1SvImJ_T0030038.1 MGP_129S1SvImJ_G0018546.1 mouse_genomes_project 11 70129482 70130464 - Eif4a1 protein_coding retained_intron MGP_129S1SvImJ_T0017320.1 MGP_129S1SvImJ_G0015224.1 mouse_genomes_project 11 124591153 124592917 + Gm11769 processed_transcript processed_transcript MGP_129S1SvImJ_T0031791.1 MGP_129S1SvImJ_G0018973.1 mouse_genomes_project 11 97175197 97191061 + MGP_129S1SvImJ_P0031791 Ppp1r9b protein_coding protein_coding MGP_129S1SvImJ_T0031792.1 MGP_129S1SvImJ_G0018973.1 mouse_genomes_project 11 97177042 97185489 + Ppp1r9b protein_coding processed_transcript MGP_129S1SvImJ_T0031793.1 MGP_129S1SvImJ_G0018973.1 mouse_genomes_project 11 97180226 97191061 + MGP_129S1SvImJ_P0031793 Ppp1r9b protein_coding protein_coding MGP_129S1SvImJ_T0030013.1 MGP_129S1SvImJ_G0018543.1 mouse_genomes_project 11 70112256 70113670 + MGP_129S1SvImJ_P0030013 Sox15 protein_coding protein_coding MGP_129S1SvImJ_T0012624.1 MGP_129S1SvImJ_G0010713.1 mouse_genomes_project 11 54228793 54231178 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009776.1 MGP_129S1SvImJ_G0007892.1 mouse_genomes_project 11 119469657 119469757 - Mir3968 miRNA miRNA MGP_129S1SvImJ_T0009752.1 MGP_129S1SvImJ_G0007868.1 mouse_genomes_project 11 100112646 100112717 - Gm24158 miRNA miRNA MGP_129S1SvImJ_T0033859.1 MGP_129S1SvImJ_G0019462.1 mouse_genomes_project 11 122446030 122569285 - MGP_129S1SvImJ_P0033859 Cyth1 protein_coding protein_coding MGP_129S1SvImJ_T0033860.1 MGP_129S1SvImJ_G0019462.1 mouse_genomes_project 11 122482140 122530456 - MGP_129S1SvImJ_P0033860 Cyth1 protein_coding protein_coding MGP_129S1SvImJ_T0033861.1 MGP_129S1SvImJ_G0019462.1 mouse_genomes_project 11 122482140 122569375 - MGP_129S1SvImJ_P0033861 Cyth1 protein_coding protein_coding MGP_129S1SvImJ_T0033862.1 MGP_129S1SvImJ_G0019462.1 mouse_genomes_project 11 122482149 122569343 - MGP_129S1SvImJ_P0033862 Cyth1 protein_coding protein_coding MGP_129S1SvImJ_T0033863.1 MGP_129S1SvImJ_G0019462.1 mouse_genomes_project 11 122502946 122544695 - Cyth1 protein_coding processed_transcript MGP_129S1SvImJ_T0033864.1 MGP_129S1SvImJ_G0019462.1 mouse_genomes_project 11 122503401 122536743 - Cyth1 protein_coding processed_transcript MGP_129S1SvImJ_T0033865.1 MGP_129S1SvImJ_G0019462.1 mouse_genomes_project 11 122503420 122530456 - MGP_129S1SvImJ_P0033865 Cyth1 protein_coding protein_coding MGP_129S1SvImJ_T0006361.1 MGP_129S1SvImJ_G0005304.1 mouse_genomes_project 11 112897393 112905691 + 1700096J18Rik lincRNA lincRNA MGP_129S1SvImJ_T0012558.1 MGP_129S1SvImJ_G0010647.1 mouse_genomes_project 11 27569968 27570897 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012642.1 MGP_129S1SvImJ_G0010731.1 mouse_genomes_project 11 59312005 59313487 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006400.1 MGP_129S1SvImJ_G0005335.1 mouse_genomes_project 11 125625936 125626503 - Gm11791 lincRNA lincRNA MGP_129S1SvImJ_T0012591.1 MGP_129S1SvImJ_G0010680.1 mouse_genomes_project 11 42452231 42452915 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003279.1 MGP_129S1SvImJ_G0003035.1 mouse_genomes_project 11 90832547 90836880 + Dgkeos antisense antisense MGP_129S1SvImJ_T0003280.1 MGP_129S1SvImJ_G0003035.1 mouse_genomes_project 11 90833884 90836880 + Dgkeos antisense antisense MGP_129S1SvImJ_T0003281.1 MGP_129S1SvImJ_G0003035.1 mouse_genomes_project 11 90834058 90835663 + Dgkeos antisense antisense MGP_129S1SvImJ_T0003282.1 MGP_129S1SvImJ_G0003035.1 mouse_genomes_project 11 90834062 90835663 + Dgkeos antisense antisense MGP_129S1SvImJ_T0033348.1 MGP_129S1SvImJ_G0019361.1 mouse_genomes_project 11 118738870 118747996 + MGP_129S1SvImJ_P0033348 Gpr142 protein_coding protein_coding MGP_129S1SvImJ_T0033349.1 MGP_129S1SvImJ_G0019361.1 mouse_genomes_project 11 118738870 118747996 + MGP_129S1SvImJ_P0033349 Gpr142 protein_coding protein_coding MGP_129S1SvImJ_T0027715.1 MGP_129S1SvImJ_G0017961.1 mouse_genomes_project 11 391743 413466 - Smtn protein_coding processed_transcript MGP_129S1SvImJ_T0027716.1 MGP_129S1SvImJ_G0017961.1 mouse_genomes_project 11 391743 413506 - MGP_129S1SvImJ_P0027716 Smtn protein_coding protein_coding MGP_129S1SvImJ_T0027717.1 MGP_129S1SvImJ_G0017961.1 mouse_genomes_project 11 391743 413506 - MGP_129S1SvImJ_P0027717 Smtn protein_coding protein_coding MGP_129S1SvImJ_T0027718.1 MGP_129S1SvImJ_G0017961.1 mouse_genomes_project 11 391743 413453 - MGP_129S1SvImJ_P0027718 Smtn protein_coding protein_coding MGP_129S1SvImJ_T0027719.1 MGP_129S1SvImJ_G0017961.1 mouse_genomes_project 11 391743 402157 - MGP_129S1SvImJ_P0027719 Smtn protein_coding protein_coding MGP_129S1SvImJ_T0027720.1 MGP_129S1SvImJ_G0017961.1 mouse_genomes_project 11 391743 411612 - MGP_129S1SvImJ_P0027720 Smtn protein_coding protein_coding MGP_129S1SvImJ_T0027721.1 MGP_129S1SvImJ_G0017961.1 mouse_genomes_project 11 394759 396774 - Smtn protein_coding processed_transcript MGP_129S1SvImJ_T0027722.1 MGP_129S1SvImJ_G0017961.1 mouse_genomes_project 11 406673 414826 - MGP_129S1SvImJ_P0027722 Smtn protein_coding protein_coding MGP_129S1SvImJ_T0027723.1 MGP_129S1SvImJ_G0017961.1 mouse_genomes_project 11 406816 413465 - MGP_129S1SvImJ_P0027723 Smtn protein_coding protein_coding MGP_129S1SvImJ_T0027724.1 MGP_129S1SvImJ_G0017961.1 mouse_genomes_project 11 409027 413463 - Smtn protein_coding processed_transcript MGP_129S1SvImJ_T0012477.1 MGP_129S1SvImJ_G0010566.1 mouse_genomes_project 11 2550625 2550880 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033743.1 MGP_129S1SvImJ_G0019439.1 mouse_genomes_project 11 120963681 120990252 - MGP_129S1SvImJ_P0033743 Mxra7 protein_coding protein_coding MGP_129S1SvImJ_T0033744.1 MGP_129S1SvImJ_G0019439.1 mouse_genomes_project 11 120968299 120990219 - MGP_129S1SvImJ_P0033744 Mxra7 protein_coding protein_coding MGP_129S1SvImJ_T0033745.1 MGP_129S1SvImJ_G0019439.1 mouse_genomes_project 11 120968491 120990209 - MGP_129S1SvImJ_P0033745 Mxra7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032937.1 MGP_129S1SvImJ_G0019273.1 mouse_genomes_project 11 107325832 107328057 + MGP_129S1SvImJ_P0032937 Sppl2c protein_coding protein_coding MGP_129S1SvImJ_T0032938.1 MGP_129S1SvImJ_G0019273.1 mouse_genomes_project 11 107325832 107330629 + MGP_129S1SvImJ_P0032938 Sppl2c protein_coding protein_coding MGP_129S1SvImJ_T0033736.1 MGP_129S1SvImJ_G0019437.1 mouse_genomes_project 11 120821673 120843546 - MGP_129S1SvImJ_P0033736 St6galnac2 protein_coding protein_coding MGP_129S1SvImJ_T0033737.1 MGP_129S1SvImJ_G0019437.1 mouse_genomes_project 11 120822273 120826055 - St6galnac2 protein_coding processed_transcript MGP_129S1SvImJ_T0033738.1 MGP_129S1SvImJ_G0019437.1 mouse_genomes_project 11 120823866 120827667 - St6galnac2 protein_coding processed_transcript MGP_129S1SvImJ_T0033739.1 MGP_129S1SvImJ_G0019437.1 mouse_genomes_project 11 120828064 120832444 - St6galnac2 protein_coding processed_transcript MGP_129S1SvImJ_T0033740.1 MGP_129S1SvImJ_G0019437.1 mouse_genomes_project 11 120832543 120833545 - St6galnac2 protein_coding processed_transcript MGP_129S1SvImJ_T0033741.1 MGP_129S1SvImJ_G0019437.1 mouse_genomes_project 11 120837418 120843287 - St6galnac2 protein_coding processed_transcript MGP_129S1SvImJ_T0029819.1 MGP_129S1SvImJ_G0018499.1 mouse_genomes_project 11 68546856 68729350 - MGP_129S1SvImJ_P0029819 Ntn1 protein_coding protein_coding MGP_129S1SvImJ_T0029820.1 MGP_129S1SvImJ_G0018499.1 mouse_genomes_project 11 68546856 68746863 - MGP_129S1SvImJ_P0029820 Ntn1 protein_coding protein_coding MGP_129S1SvImJ_T0029821.1 MGP_129S1SvImJ_G0018499.1 mouse_genomes_project 11 68728167 68729536 - MGP_129S1SvImJ_P0029821 Ntn1 protein_coding protein_coding MGP_129S1SvImJ_T0031552.1 MGP_129S1SvImJ_G0018913.1 mouse_genomes_project 11 89440106 89459645 - MGP_129S1SvImJ_P0031552 Lpo protein_coding protein_coding MGP_129S1SvImJ_T0031553.1 MGP_129S1SvImJ_G0018913.1 mouse_genomes_project 11 89450184 89451123 - Lpo protein_coding retained_intron MGP_129S1SvImJ_T0031554.1 MGP_129S1SvImJ_G0018913.1 mouse_genomes_project 11 89451351 89461665 - MGP_129S1SvImJ_P0031554 Lpo protein_coding protein_coding MGP_129S1SvImJ_T0098460.1 MGP_129S1SvImJ_G0036545.1 mouse_genomes_project 11 120431847 120431963 - n-R5s74 rRNA rRNA MGP_129S1SvImJ_T0030676.1 MGP_129S1SvImJ_G0018703.1 mouse_genomes_project 11 75642635 75896069 + MGP_129S1SvImJ_P0030676 Smg6 protein_coding protein_coding MGP_129S1SvImJ_T0030677.1 MGP_129S1SvImJ_G0018703.1 mouse_genomes_project 11 75647339 75896069 + MGP_129S1SvImJ_P0030677 Smg6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030678.1 MGP_129S1SvImJ_G0018703.1 mouse_genomes_project 11 75714150 75716996 + Smg6 protein_coding retained_intron MGP_129S1SvImJ_T0030679.1 MGP_129S1SvImJ_G0018703.1 mouse_genomes_project 11 75718642 75870037 + MGP_129S1SvImJ_P0030679 Smg6 protein_coding protein_coding MGP_129S1SvImJ_T0030680.1 MGP_129S1SvImJ_G0018703.1 mouse_genomes_project 11 75863102 75870037 + Smg6 protein_coding processed_transcript MGP_129S1SvImJ_T0030681.1 MGP_129S1SvImJ_G0018703.1 mouse_genomes_project 11 75891263 75894802 + Smg6 protein_coding processed_transcript MGP_129S1SvImJ_T0003160.1 MGP_129S1SvImJ_G0002935.1 mouse_genomes_project 11 32634000 32642407 + 4930403D09Rik antisense antisense MGP_129S1SvImJ_T0029669.1 MGP_129S1SvImJ_G0018459.1 mouse_genomes_project 11 62702781 62722742 + MGP_129S1SvImJ_P0029669 Mmgt2 protein_coding protein_coding MGP_129S1SvImJ_T0029670.1 MGP_129S1SvImJ_G0018459.1 mouse_genomes_project 11 62702930 62718717 + Mmgt2 protein_coding retained_intron MGP_129S1SvImJ_T0029671.1 MGP_129S1SvImJ_G0018459.1 mouse_genomes_project 11 62702934 62722672 + Mmgt2 protein_coding processed_transcript MGP_129S1SvImJ_T0029672.1 MGP_129S1SvImJ_G0018459.1 mouse_genomes_project 11 62702937 62722604 + Mmgt2 protein_coding processed_transcript MGP_129S1SvImJ_T0029673.1 MGP_129S1SvImJ_G0018459.1 mouse_genomes_project 11 62702948 62722812 + MGP_129S1SvImJ_P0029673 Mmgt2 protein_coding protein_coding MGP_129S1SvImJ_T0029674.1 MGP_129S1SvImJ_G0018459.1 mouse_genomes_project 11 62702952 62723119 + MGP_129S1SvImJ_P0029674 Mmgt2 protein_coding protein_coding MGP_129S1SvImJ_T0029675.1 MGP_129S1SvImJ_G0018459.1 mouse_genomes_project 11 62703566 62724232 + MGP_129S1SvImJ_P0029675 Mmgt2 protein_coding protein_coding MGP_129S1SvImJ_T0032448.1 MGP_129S1SvImJ_G0019175.1 mouse_genomes_project 11 103819007 103831062 + Atp6v0a1 protein_coding processed_transcript MGP_129S1SvImJ_T0032449.1 MGP_129S1SvImJ_G0019175.1 mouse_genomes_project 11 103819007 103855145 + Atp6v0a1 protein_coding processed_transcript MGP_129S1SvImJ_T0032450.1 MGP_129S1SvImJ_G0019175.1 mouse_genomes_project 11 103819007 103872742 + MGP_129S1SvImJ_P0032450 Atp6v0a1 protein_coding protein_coding MGP_129S1SvImJ_T0032451.1 MGP_129S1SvImJ_G0019175.1 mouse_genomes_project 11 103819007 103874037 + MGP_129S1SvImJ_P0032451 Atp6v0a1 protein_coding protein_coding MGP_129S1SvImJ_T0032452.1 MGP_129S1SvImJ_G0019175.1 mouse_genomes_project 11 103819042 103874031 + MGP_129S1SvImJ_P0032452 Atp6v0a1 protein_coding protein_coding MGP_129S1SvImJ_T0032453.1 MGP_129S1SvImJ_G0019175.1 mouse_genomes_project 11 103820212 103830167 + MGP_129S1SvImJ_P0032453 Atp6v0a1 protein_coding protein_coding MGP_129S1SvImJ_T0032454.1 MGP_129S1SvImJ_G0019175.1 mouse_genomes_project 11 103821376 103874037 + MGP_129S1SvImJ_P0032454 Atp6v0a1 protein_coding protein_coding MGP_129S1SvImJ_T0032455.1 MGP_129S1SvImJ_G0019175.1 mouse_genomes_project 11 103830788 103837874 + Atp6v0a1 protein_coding processed_transcript MGP_129S1SvImJ_T0032456.1 MGP_129S1SvImJ_G0019175.1 mouse_genomes_project 11 103850167 103859555 + Atp6v0a1 protein_coding processed_transcript MGP_129S1SvImJ_T0032457.1 MGP_129S1SvImJ_G0019175.1 mouse_genomes_project 11 103854136 103855148 + Atp6v0a1 protein_coding processed_transcript MGP_129S1SvImJ_T0030578.1 MGP_129S1SvImJ_G0018664.1 mouse_genomes_project 11 74090588 74095008 - MGP_129S1SvImJ_P0030578 Olfr1 protein_coding protein_coding MGP_129S1SvImJ_T0030579.1 MGP_129S1SvImJ_G0018664.1 mouse_genomes_project 11 74090944 74095008 - MGP_129S1SvImJ_P0030579 Olfr1 protein_coding protein_coding MGP_129S1SvImJ_T0000868.1 MGP_129S1SvImJ_G0000801.1 mouse_genomes_project 11 16427632 16428499 - TEC TEC MGP_129S1SvImJ_T0031302.1 MGP_129S1SvImJ_G0018857.1 mouse_genomes_project 11 85026587 85028696 + MGP_129S1SvImJ_P0031302 Ccl4 protein_coding protein_coding MGP_129S1SvImJ_T0031966.1 MGP_129S1SvImJ_G0019019.1 mouse_genomes_project 11 99389815 99402520 + MGP_129S1SvImJ_P0031966 Sp6 protein_coding protein_coding MGP_129S1SvImJ_T0031967.1 MGP_129S1SvImJ_G0019019.1 mouse_genomes_project 11 99395051 99402517 + MGP_129S1SvImJ_P0031967 Sp6 protein_coding protein_coding MGP_129S1SvImJ_T0031026.1 MGP_129S1SvImJ_G0018775.1 mouse_genomes_project 11 79318254 79324855 + MGP_129S1SvImJ_P0031026 Aldoc protein_coding protein_coding MGP_129S1SvImJ_T0031027.1 MGP_129S1SvImJ_G0018775.1 mouse_genomes_project 11 79318454 79319980 + Aldoc protein_coding retained_intron MGP_129S1SvImJ_T0031028.1 MGP_129S1SvImJ_G0018775.1 mouse_genomes_project 11 79319482 79322043 + MGP_129S1SvImJ_P0031028 Aldoc protein_coding protein_coding MGP_129S1SvImJ_T0031029.1 MGP_129S1SvImJ_G0018775.1 mouse_genomes_project 11 79319608 79321401 + Aldoc protein_coding processed_transcript MGP_129S1SvImJ_T0031030.1 MGP_129S1SvImJ_G0018775.1 mouse_genomes_project 11 79320347 79320844 + Aldoc protein_coding processed_transcript MGP_129S1SvImJ_T0031031.1 MGP_129S1SvImJ_G0018775.1 mouse_genomes_project 11 79320611 79321991 + Aldoc protein_coding processed_transcript MGP_129S1SvImJ_T0009673.1 MGP_129S1SvImJ_G0007789.1 mouse_genomes_project 11 26730679 26730748 - Mir216c miRNA miRNA MGP_129S1SvImJ_T0027789.1 MGP_129S1SvImJ_G0017977.1 mouse_genomes_project 11 1090362 1113320 + MGP_129S1SvImJ_P0027789 Sf3a1 protein_coding protein_coding MGP_129S1SvImJ_T0027790.1 MGP_129S1SvImJ_G0017977.1 mouse_genomes_project 11 1090367 1103889 + Sf3a1 protein_coding processed_transcript MGP_129S1SvImJ_T0027791.1 MGP_129S1SvImJ_G0017977.1 mouse_genomes_project 11 1090367 1101920 + Sf3a1 protein_coding retained_intron MGP_129S1SvImJ_T0027792.1 MGP_129S1SvImJ_G0017977.1 mouse_genomes_project 11 1108326 1110198 + Sf3a1 protein_coding retained_intron MGP_129S1SvImJ_T0030384.1 MGP_129S1SvImJ_G0018618.1 mouse_genomes_project 11 71517295 71544228 - Nup88 protein_coding retained_intron MGP_129S1SvImJ_T0030385.1 MGP_129S1SvImJ_G0018618.1 mouse_genomes_project 11 71517309 71544242 - MGP_129S1SvImJ_P0030385 Nup88 protein_coding protein_coding MGP_129S1SvImJ_T0030386.1 MGP_129S1SvImJ_G0018618.1 mouse_genomes_project 11 71517314 71520598 - Nup88 protein_coding retained_intron MGP_129S1SvImJ_T0030387.1 MGP_129S1SvImJ_G0018618.1 mouse_genomes_project 11 71517319 71544231 - MGP_129S1SvImJ_P0030387 Nup88 protein_coding protein_coding MGP_129S1SvImJ_T0030388.1 MGP_129S1SvImJ_G0018618.1 mouse_genomes_project 11 71517339 71544223 - MGP_129S1SvImJ_P0030388 Nup88 protein_coding protein_coding MGP_129S1SvImJ_T0030389.1 MGP_129S1SvImJ_G0018618.1 mouse_genomes_project 11 71517413 71544149 - MGP_129S1SvImJ_P0030389 Nup88 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030390.1 MGP_129S1SvImJ_G0018618.1 mouse_genomes_project 11 71518114 71519336 - Nup88 protein_coding retained_intron MGP_129S1SvImJ_T0030391.1 MGP_129S1SvImJ_G0018618.1 mouse_genomes_project 11 71518173 71518724 - Nup88 protein_coding retained_intron MGP_129S1SvImJ_T0030392.1 MGP_129S1SvImJ_G0018618.1 mouse_genomes_project 11 71518215 71518973 - Nup88 protein_coding retained_intron MGP_129S1SvImJ_T0030393.1 MGP_129S1SvImJ_G0018618.1 mouse_genomes_project 11 71518648 71519270 - Nup88 protein_coding retained_intron MGP_129S1SvImJ_T0030394.1 MGP_129S1SvImJ_G0018618.1 mouse_genomes_project 11 71518918 71523050 - Nup88 protein_coding retained_intron MGP_129S1SvImJ_T0030395.1 MGP_129S1SvImJ_G0018618.1 mouse_genomes_project 11 71523799 71544230 - Nup88 protein_coding retained_intron MGP_129S1SvImJ_T0030396.1 MGP_129S1SvImJ_G0018618.1 mouse_genomes_project 11 71528727 71530729 - Nup88 protein_coding retained_intron MGP_129S1SvImJ_T0030397.1 MGP_129S1SvImJ_G0018618.1 mouse_genomes_project 11 71529425 71531180 - Nup88 protein_coding retained_intron MGP_129S1SvImJ_T0030398.1 MGP_129S1SvImJ_G0018618.1 mouse_genomes_project 11 71530466 71536029 - Nup88 protein_coding retained_intron MGP_129S1SvImJ_T0000865.1 MGP_129S1SvImJ_G0000798.1 mouse_genomes_project 11 15864968 15865564 + TEC TEC MGP_129S1SvImJ_T0003222.1 MGP_129S1SvImJ_G0002990.1 mouse_genomes_project 11 63079892 63093592 - Cdrt4os1 antisense antisense MGP_129S1SvImJ_T0003223.1 MGP_129S1SvImJ_G0002990.1 mouse_genomes_project 11 63088577 63093598 - Cdrt4os1 antisense antisense MGP_129S1SvImJ_T0102135.1 MGP_129S1SvImJ_G0039970.1 mouse_genomes_project 11 58317948 58318340 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0029237.1 MGP_129S1SvImJ_G0018345.1 mouse_genomes_project 11 57879024 57889282 + MGP_129S1SvImJ_P0029237 Igtp protein_coding protein_coding MGP_129S1SvImJ_T0029238.1 MGP_129S1SvImJ_G0018345.1 mouse_genomes_project 11 57879054 57889256 + MGP_129S1SvImJ_P0029238 Igtp protein_coding protein_coding MGP_129S1SvImJ_T0029239.1 MGP_129S1SvImJ_G0018345.1 mouse_genomes_project 11 57879056 57889266 + MGP_129S1SvImJ_P0029239 Igtp protein_coding protein_coding MGP_129S1SvImJ_T0100516.1 MGP_129S1SvImJ_G0038583.1 mouse_genomes_project 11 75621160 75621253 + Snord91a snoRNA snoRNA MGP_129S1SvImJ_T0029263.1 MGP_129S1SvImJ_G0018354.1 mouse_genomes_project 11 58178694 58185453 - MGP_129S1SvImJ_P0029263 4930504O13Rik protein_coding protein_coding MGP_129S1SvImJ_T0032912.1 MGP_129S1SvImJ_G0019264.1 mouse_genomes_project 11 106618291 106716192 - MGP_129S1SvImJ_P0032912 protein_coding protein_coding MGP_129S1SvImJ_T0028760.1 MGP_129S1SvImJ_G0018220.1 mouse_genomes_project 11 48220244 48221183 + MGP_129S1SvImJ_P0028760 Olfr1394 protein_coding protein_coding MGP_129S1SvImJ_T0012578.1 MGP_129S1SvImJ_G0010667.1 mouse_genomes_project 11 34202019 34202629 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000863.1 MGP_129S1SvImJ_G0000796.1 mouse_genomes_project 11 6967281 6967644 - TEC TEC MGP_129S1SvImJ_T0006255.1 MGP_129S1SvImJ_G0005226.1 mouse_genomes_project 11 51232208 51575239 - lincRNA lincRNA MGP_129S1SvImJ_T0033944.1 MGP_129S1SvImJ_G0019480.1 mouse_genomes_project 11 123726538 123738677 - MGP_129S1SvImJ_P0033944 Sgsh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033945.1 MGP_129S1SvImJ_G0019480.1 mouse_genomes_project 11 123729355 123738705 - Sgsh protein_coding processed_transcript MGP_129S1SvImJ_T0033946.1 MGP_129S1SvImJ_G0019480.1 mouse_genomes_project 11 123729391 123738691 - MGP_129S1SvImJ_P0033946 Sgsh protein_coding protein_coding MGP_129S1SvImJ_T0033947.1 MGP_129S1SvImJ_G0019480.1 mouse_genomes_project 11 123729531 123730975 - Sgsh protein_coding processed_transcript MGP_129S1SvImJ_T0033948.1 MGP_129S1SvImJ_G0019480.1 mouse_genomes_project 11 123729912 123735874 - Sgsh protein_coding processed_transcript MGP_129S1SvImJ_T0003345.1 MGP_129S1SvImJ_G0003088.1 mouse_genomes_project 11 111438523 111439135 + Gm11657 antisense antisense MGP_129S1SvImJ_T0009661.1 MGP_129S1SvImJ_G0007777.1 mouse_genomes_project 11 1889964 1890022 + Mir6918 miRNA miRNA MGP_129S1SvImJ_T0032675.1 MGP_129S1SvImJ_G0019224.1 mouse_genomes_project 11 105115055 105137919 - MGP_129S1SvImJ_P0032675 Lsm12 protein_coding protein_coding MGP_129S1SvImJ_T0032676.1 MGP_129S1SvImJ_G0019224.1 mouse_genomes_project 11 105115055 105137986 - MGP_129S1SvImJ_P0032676 Lsm12 protein_coding protein_coding MGP_129S1SvImJ_T0032677.1 MGP_129S1SvImJ_G0019224.1 mouse_genomes_project 11 105116499 105135530 - Lsm12 protein_coding processed_transcript MGP_129S1SvImJ_T0032678.1 MGP_129S1SvImJ_G0019224.1 mouse_genomes_project 11 105116663 105137947 - Lsm12 protein_coding processed_transcript MGP_129S1SvImJ_T0032679.1 MGP_129S1SvImJ_G0019224.1 mouse_genomes_project 11 105119688 105137951 - Lsm12 protein_coding processed_transcript MGP_129S1SvImJ_T0032620.1 MGP_129S1SvImJ_G0019212.1 mouse_genomes_project 11 104692076 104708572 - MGP_129S1SvImJ_P0032620 Etv4 protein_coding protein_coding MGP_129S1SvImJ_T0032621.1 MGP_129S1SvImJ_G0019212.1 mouse_genomes_project 11 104692081 104708633 - MGP_129S1SvImJ_P0032621 Etv4 protein_coding protein_coding MGP_129S1SvImJ_T0032622.1 MGP_129S1SvImJ_G0019212.1 mouse_genomes_project 11 104692081 104708633 - MGP_129S1SvImJ_P0032622 Etv4 protein_coding protein_coding MGP_129S1SvImJ_T0032623.1 MGP_129S1SvImJ_G0019212.1 mouse_genomes_project 11 104692681 104694506 - Etv4 protein_coding processed_transcript MGP_129S1SvImJ_T0032624.1 MGP_129S1SvImJ_G0019212.1 mouse_genomes_project 11 104696016 104708123 - Etv4 protein_coding processed_transcript MGP_129S1SvImJ_T0032625.1 MGP_129S1SvImJ_G0019212.1 mouse_genomes_project 11 104696155 104708520 - Etv4 protein_coding processed_transcript MGP_129S1SvImJ_T0032626.1 MGP_129S1SvImJ_G0019212.1 mouse_genomes_project 11 104696186 104707753 - Etv4 protein_coding processed_transcript MGP_129S1SvImJ_T0032627.1 MGP_129S1SvImJ_G0019212.1 mouse_genomes_project 11 104696405 104708484 - Etv4 protein_coding processed_transcript MGP_129S1SvImJ_T0032628.1 MGP_129S1SvImJ_G0019212.1 mouse_genomes_project 11 104696492 104708522 - Etv4 protein_coding processed_transcript MGP_129S1SvImJ_T0032629.1 MGP_129S1SvImJ_G0019212.1 mouse_genomes_project 11 104696492 104706684 - Etv4 protein_coding processed_transcript MGP_129S1SvImJ_T0032630.1 MGP_129S1SvImJ_G0019212.1 mouse_genomes_project 11 104696532 104708572 - Etv4 protein_coding processed_transcript MGP_129S1SvImJ_T0032631.1 MGP_129S1SvImJ_G0019212.1 mouse_genomes_project 11 104706550 104708110 - Etv4 protein_coding processed_transcript MGP_129S1SvImJ_T0029045.1 MGP_129S1SvImJ_G0018297.1 mouse_genomes_project 11 52866111 52867033 + MGP_129S1SvImJ_P0029045 Gm9945 protein_coding protein_coding MGP_129S1SvImJ_T0006235.1 MGP_129S1SvImJ_G0005208.1 mouse_genomes_project 11 36150236 36164431 + Gm12128 lincRNA lincRNA MGP_129S1SvImJ_T0017297.1 MGP_129S1SvImJ_G0015218.1 mouse_genomes_project 11 116413599 116466578 - BC006965 processed_transcript processed_transcript MGP_129S1SvImJ_T0017298.1 MGP_129S1SvImJ_G0015218.1 mouse_genomes_project 11 116414493 116421813 - BC006965 processed_transcript processed_transcript MGP_129S1SvImJ_T0017299.1 MGP_129S1SvImJ_G0015218.1 mouse_genomes_project 11 116414518 116419029 - BC006965 processed_transcript processed_transcript MGP_129S1SvImJ_T0017300.1 MGP_129S1SvImJ_G0015218.1 mouse_genomes_project 11 116418831 116429047 - BC006965 processed_transcript processed_transcript MGP_129S1SvImJ_T0017301.1 MGP_129S1SvImJ_G0015218.1 mouse_genomes_project 11 116419817 116421813 - BC006965 processed_transcript processed_transcript MGP_129S1SvImJ_T0017302.1 MGP_129S1SvImJ_G0015218.1 mouse_genomes_project 11 116421689 116466144 - BC006965 processed_transcript processed_transcript MGP_129S1SvImJ_T0017303.1 MGP_129S1SvImJ_G0015218.1 mouse_genomes_project 11 116421776 116466562 - BC006965 processed_transcript processed_transcript MGP_129S1SvImJ_T0017304.1 MGP_129S1SvImJ_G0015218.1 mouse_genomes_project 11 116429116 116445089 - BC006965 processed_transcript processed_transcript MGP_129S1SvImJ_T0017305.1 MGP_129S1SvImJ_G0015218.1 mouse_genomes_project 11 116429232 116466584 - BC006965 processed_transcript processed_transcript MGP_129S1SvImJ_T0017306.1 MGP_129S1SvImJ_G0015218.1 mouse_genomes_project 11 116429307 116466562 - BC006965 processed_transcript processed_transcript MGP_129S1SvImJ_T0017307.1 MGP_129S1SvImJ_G0015218.1 mouse_genomes_project 11 116436645 116445248 - BC006965 processed_transcript processed_transcript MGP_129S1SvImJ_T0017308.1 MGP_129S1SvImJ_G0015218.1 mouse_genomes_project 11 116436756 116466585 - BC006965 processed_transcript processed_transcript MGP_129S1SvImJ_T0017309.1 MGP_129S1SvImJ_G0015218.1 mouse_genomes_project 11 116436863 116466578 - BC006965 processed_transcript processed_transcript MGP_129S1SvImJ_T0017310.1 MGP_129S1SvImJ_G0015218.1 mouse_genomes_project 11 116441359 116466563 - BC006965 processed_transcript processed_transcript MGP_129S1SvImJ_T0017311.1 MGP_129S1SvImJ_G0015218.1 mouse_genomes_project 11 116441359 116466563 - BC006965 processed_transcript processed_transcript MGP_129S1SvImJ_T0017312.1 MGP_129S1SvImJ_G0015218.1 mouse_genomes_project 11 116441361 116538086 - BC006965 processed_transcript processed_transcript MGP_129S1SvImJ_T0017313.1 MGP_129S1SvImJ_G0015218.1 mouse_genomes_project 11 116445053 116466561 - BC006965 processed_transcript processed_transcript MGP_129S1SvImJ_T0017314.1 MGP_129S1SvImJ_G0015218.1 mouse_genomes_project 11 116474068 116500556 - BC006965 processed_transcript processed_transcript MGP_129S1SvImJ_T0027753.1 MGP_129S1SvImJ_G0017970.1 mouse_genomes_project 11 895428 911757 + MGP_129S1SvImJ_P0027753 Gal3st1 protein_coding protein_coding MGP_129S1SvImJ_T0027754.1 MGP_129S1SvImJ_G0017970.1 mouse_genomes_project 11 895505 911746 + MGP_129S1SvImJ_P0027754 Gal3st1 protein_coding protein_coding MGP_129S1SvImJ_T0027755.1 MGP_129S1SvImJ_G0017970.1 mouse_genomes_project 11 901715 911739 + MGP_129S1SvImJ_P0027755 Gal3st1 protein_coding protein_coding MGP_129S1SvImJ_T0030577.1 MGP_129S1SvImJ_G0018663.1 mouse_genomes_project 11 74065590 74071214 + MGP_129S1SvImJ_P0030577 Olfr376 protein_coding protein_coding MGP_129S1SvImJ_T0029217.1 MGP_129S1SvImJ_G0018338.1 mouse_genomes_project 11 57271850 57420417 + MGP_129S1SvImJ_P0029217 Galnt10 protein_coding protein_coding MGP_129S1SvImJ_T0029218.1 MGP_129S1SvImJ_G0018338.1 mouse_genomes_project 11 57271873 57357533 + MGP_129S1SvImJ_P0029218 Galnt10 protein_coding protein_coding MGP_129S1SvImJ_T0003138.1 MGP_129S1SvImJ_G0002918.1 mouse_genomes_project 11 4383595 4386733 - antisense antisense MGP_129S1SvImJ_T0000867.1 MGP_129S1SvImJ_G0000800.1 mouse_genomes_project 11 16306911 16308468 - TEC TEC MGP_129S1SvImJ_T0102138.1 MGP_129S1SvImJ_G0039973.1 mouse_genomes_project 11 74181338 74181423 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0028804.1 MGP_129S1SvImJ_G0018235.1 mouse_genomes_project 11 48802786 48804295 + MGP_129S1SvImJ_P0028804 Scgb3a1 protein_coding protein_coding MGP_129S1SvImJ_T0028805.1 MGP_129S1SvImJ_G0018235.1 mouse_genomes_project 11 48802786 48804295 + MGP_129S1SvImJ_P0028805 Scgb3a1 protein_coding protein_coding MGP_129S1SvImJ_T0032523.1 MGP_129S1SvImJ_G0019191.1 mouse_genomes_project 11 104121126 104122273 - MGP_129S1SvImJ_P0032523 Coa3 protein_coding protein_coding MGP_129S1SvImJ_T0032524.1 MGP_129S1SvImJ_G0019191.1 mouse_genomes_project 11 104121496 104122102 - MGP_129S1SvImJ_P0032524 Coa3 protein_coding protein_coding MGP_129S1SvImJ_T0028027.1 MGP_129S1SvImJ_G0018029.1 mouse_genomes_project 11 3785416 3787401 - Wap protein_coding processed_transcript MGP_129S1SvImJ_T0028028.1 MGP_129S1SvImJ_G0018029.1 mouse_genomes_project 11 3785416 3788409 - MGP_129S1SvImJ_P0028028 Wap protein_coding protein_coding MGP_129S1SvImJ_T0028029.1 MGP_129S1SvImJ_G0018029.1 mouse_genomes_project 11 3785473 3787390 - Wap protein_coding processed_transcript MGP_129S1SvImJ_T0006288.1 MGP_129S1SvImJ_G0005254.1 mouse_genomes_project 11 72295539 72297574 - Gm12325 lincRNA lincRNA MGP_129S1SvImJ_T0032281.1 MGP_129S1SvImJ_G0019111.1 mouse_genomes_project 11 102360509 102361429 - MGP_129S1SvImJ_P0032281 Krtap4-6 protein_coding protein_coding MGP_129S1SvImJ_T0028216.1 MGP_129S1SvImJ_G0018076.1 mouse_genomes_project 11 19650996 19945998 - MGP_129S1SvImJ_P0028216 Ehbp1 protein_coding protein_coding MGP_129S1SvImJ_T0028217.1 MGP_129S1SvImJ_G0018076.1 mouse_genomes_project 11 19650996 19945041 - MGP_129S1SvImJ_P0028217 Ehbp1 protein_coding protein_coding MGP_129S1SvImJ_T0028218.1 MGP_129S1SvImJ_G0018076.1 mouse_genomes_project 11 19650998 19945998 - MGP_129S1SvImJ_P0028218 Ehbp1 protein_coding protein_coding MGP_129S1SvImJ_T0028219.1 MGP_129S1SvImJ_G0018076.1 mouse_genomes_project 11 19757402 19820251 - Ehbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0028220.1 MGP_129S1SvImJ_G0018076.1 mouse_genomes_project 11 19793795 19945075 - MGP_129S1SvImJ_P0028220 Ehbp1 protein_coding protein_coding MGP_129S1SvImJ_T0028221.1 MGP_129S1SvImJ_G0018076.1 mouse_genomes_project 11 19816281 19818655 - Ehbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0028222.1 MGP_129S1SvImJ_G0018076.1 mouse_genomes_project 11 19887066 20010928 - Ehbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0029397.1 MGP_129S1SvImJ_G0018408.1 mouse_genomes_project 11 59690383 59731536 + Nt5m protein_coding processed_transcript MGP_129S1SvImJ_T0029398.1 MGP_129S1SvImJ_G0018408.1 mouse_genomes_project 11 59690383 59735971 + Nt5m protein_coding processed_transcript MGP_129S1SvImJ_T0029399.1 MGP_129S1SvImJ_G0018408.1 mouse_genomes_project 11 59699009 59731536 + MGP_129S1SvImJ_P0029399 Nt5m protein_coding protein_coding MGP_129S1SvImJ_T0029400.1 MGP_129S1SvImJ_G0018408.1 mouse_genomes_project 11 59699040 59731536 + Nt5m protein_coding processed_transcript MGP_129S1SvImJ_T0033213.1 MGP_129S1SvImJ_G0019332.1 mouse_genomes_project 11 112970185 112977904 + MGP_129S1SvImJ_P0033213 9930022D16Rik protein_coding protein_coding MGP_129S1SvImJ_T0031987.1 MGP_129S1SvImJ_G0019026.1 mouse_genomes_project 11 99550024 99551726 - Kpnb1 protein_coding retained_intron MGP_129S1SvImJ_T0031988.1 MGP_129S1SvImJ_G0019026.1 mouse_genomes_project 11 99550157 99576867 - MGP_129S1SvImJ_P0031988 Kpnb1 protein_coding protein_coding MGP_129S1SvImJ_T0031989.1 MGP_129S1SvImJ_G0019026.1 mouse_genomes_project 11 99551724 99552904 - Kpnb1 protein_coding retained_intron MGP_129S1SvImJ_T0017321.1 MGP_129S1SvImJ_G0015225.1 mouse_genomes_project 11 124630772 124634185 - 2810410L24Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017322.1 MGP_129S1SvImJ_G0015225.1 mouse_genomes_project 11 124633140 124635286 - 2810410L24Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0099269.1 MGP_129S1SvImJ_G0037336.1 mouse_genomes_project 11 88905326 88905432 - Gm22883 snRNA snRNA MGP_129S1SvImJ_T0003178.1 MGP_129S1SvImJ_G0002952.1 mouse_genomes_project 11 51326605 51329523 - antisense antisense MGP_129S1SvImJ_T0006284.1 MGP_129S1SvImJ_G0005251.1 mouse_genomes_project 11 72006303 72012638 - Gm16013 lincRNA lincRNA MGP_129S1SvImJ_T0029525.1 MGP_129S1SvImJ_G0018435.1 mouse_genomes_project 11 61174013 61219459 - MGP_129S1SvImJ_P0029525 Aldh3a2 protein_coding protein_coding MGP_129S1SvImJ_T0029526.1 MGP_129S1SvImJ_G0018435.1 mouse_genomes_project 11 61196148 61219459 - MGP_129S1SvImJ_P0029526 Aldh3a2 protein_coding protein_coding MGP_129S1SvImJ_T0029527.1 MGP_129S1SvImJ_G0018435.1 mouse_genomes_project 11 61198848 61219459 - MGP_129S1SvImJ_P0029527 Aldh3a2 protein_coding protein_coding MGP_129S1SvImJ_T0029528.1 MGP_129S1SvImJ_G0018435.1 mouse_genomes_project 11 61200393 61214609 - Aldh3a2 protein_coding processed_transcript MGP_129S1SvImJ_T0029529.1 MGP_129S1SvImJ_G0018435.1 mouse_genomes_project 11 61208272 61219738 - Aldh3a2 protein_coding processed_transcript MGP_129S1SvImJ_T0029530.1 MGP_129S1SvImJ_G0018435.1 mouse_genomes_project 11 61216443 61219401 - Aldh3a2 protein_coding processed_transcript MGP_129S1SvImJ_T0029531.1 MGP_129S1SvImJ_G0018435.1 mouse_genomes_project 11 61217497 61219715 - Aldh3a2 protein_coding processed_transcript MGP_129S1SvImJ_T0027739.1 MGP_129S1SvImJ_G0017966.1 mouse_genomes_project 11 818293 826502 - MGP_129S1SvImJ_P0027739 Slc35e4 protein_coding protein_coding MGP_129S1SvImJ_T0027740.1 MGP_129S1SvImJ_G0017966.1 mouse_genomes_project 11 818294 826502 - MGP_129S1SvImJ_P0027740 Slc35e4 protein_coding protein_coding MGP_129S1SvImJ_T0003364.1 MGP_129S1SvImJ_G0003103.1 mouse_genomes_project 11 120663929 120667768 - Gm29292 antisense antisense MGP_129S1SvImJ_T0034005.1 MGP_129S1SvImJ_G0019490.1 mouse_genomes_project 11 124525299 124533500 - MGP_129S1SvImJ_P0034005 Enthd2 protein_coding protein_coding MGP_129S1SvImJ_T0034006.1 MGP_129S1SvImJ_G0019490.1 mouse_genomes_project 11 124525299 124533500 - MGP_129S1SvImJ_P0034006 Enthd2 protein_coding protein_coding MGP_129S1SvImJ_T0034007.1 MGP_129S1SvImJ_G0019490.1 mouse_genomes_project 11 124525299 124533500 - MGP_129S1SvImJ_P0034007 Enthd2 protein_coding protein_coding MGP_129S1SvImJ_T0034008.1 MGP_129S1SvImJ_G0019490.1 mouse_genomes_project 11 124528928 124532154 - Enthd2 protein_coding processed_transcript MGP_129S1SvImJ_T0034009.1 MGP_129S1SvImJ_G0019490.1 mouse_genomes_project 11 124530298 124532029 - Enthd2 protein_coding processed_transcript MGP_129S1SvImJ_T0034010.1 MGP_129S1SvImJ_G0019490.1 mouse_genomes_project 11 124531667 124533469 - Enthd2 protein_coding processed_transcript MGP_129S1SvImJ_T0028075.1 MGP_129S1SvImJ_G0018045.1 mouse_genomes_project 11 8972696 8996722 + MGP_129S1SvImJ_P0028075 Ikzf1 protein_coding protein_coding MGP_129S1SvImJ_T0028076.1 MGP_129S1SvImJ_G0018045.1 mouse_genomes_project 11 8972696 9046993 + MGP_129S1SvImJ_P0028076 Ikzf1 protein_coding protein_coding MGP_129S1SvImJ_T0028077.1 MGP_129S1SvImJ_G0018045.1 mouse_genomes_project 11 8973615 9064772 + MGP_129S1SvImJ_P0028077 Ikzf1 protein_coding protein_coding MGP_129S1SvImJ_T0028078.1 MGP_129S1SvImJ_G0018045.1 mouse_genomes_project 11 8973903 9065587 + MGP_129S1SvImJ_P0028078 Ikzf1 protein_coding protein_coding MGP_129S1SvImJ_T0028079.1 MGP_129S1SvImJ_G0018045.1 mouse_genomes_project 11 8973919 9054336 + MGP_129S1SvImJ_P0028079 Ikzf1 protein_coding protein_coding MGP_129S1SvImJ_T0028080.1 MGP_129S1SvImJ_G0018045.1 mouse_genomes_project 11 8974135 9062459 + MGP_129S1SvImJ_P0028080 Ikzf1 protein_coding protein_coding MGP_129S1SvImJ_T0033028.1 MGP_129S1SvImJ_G0019291.1 mouse_genomes_project 11 109302085 109328512 + MGP_129S1SvImJ_P0033028 Dcaf7 protein_coding protein_coding MGP_129S1SvImJ_T0033029.1 MGP_129S1SvImJ_G0019291.1 mouse_genomes_project 11 109302113 109315537 + Dcaf7 protein_coding retained_intron MGP_129S1SvImJ_T0030301.1 MGP_129S1SvImJ_G0018603.1 mouse_genomes_project 11 71102154 71156575 + MGP_129S1SvImJ_P0030301 Mink1 protein_coding protein_coding MGP_129S1SvImJ_T0030302.1 MGP_129S1SvImJ_G0018603.1 mouse_genomes_project 11 71102163 71155963 + MGP_129S1SvImJ_P0030302 Mink1 protein_coding protein_coding MGP_129S1SvImJ_T0030303.1 MGP_129S1SvImJ_G0018603.1 mouse_genomes_project 11 71102171 71156571 + MGP_129S1SvImJ_P0030303 Mink1 protein_coding protein_coding MGP_129S1SvImJ_T0030304.1 MGP_129S1SvImJ_G0018603.1 mouse_genomes_project 11 71102290 71156576 + MGP_129S1SvImJ_P0030304 Mink1 protein_coding protein_coding MGP_129S1SvImJ_T0030305.1 MGP_129S1SvImJ_G0018603.1 mouse_genomes_project 11 71102343 71155550 + MGP_129S1SvImJ_P0030305 Mink1 protein_coding protein_coding MGP_129S1SvImJ_T0030306.1 MGP_129S1SvImJ_G0018603.1 mouse_genomes_project 11 71139148 71145243 + Mink1 protein_coding processed_transcript MGP_129S1SvImJ_T0030307.1 MGP_129S1SvImJ_G0018603.1 mouse_genomes_project 11 71142153 71156576 + MGP_129S1SvImJ_P0030307 Mink1 protein_coding protein_coding MGP_129S1SvImJ_T0030308.1 MGP_129S1SvImJ_G0018603.1 mouse_genomes_project 11 71144411 71147636 + MGP_129S1SvImJ_P0030308 Mink1 protein_coding protein_coding MGP_129S1SvImJ_T0030309.1 MGP_129S1SvImJ_G0018603.1 mouse_genomes_project 11 71144434 71147291 + MGP_129S1SvImJ_P0030309 Mink1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030310.1 MGP_129S1SvImJ_G0018603.1 mouse_genomes_project 11 71146912 71147985 + Mink1 protein_coding retained_intron MGP_129S1SvImJ_T0030311.1 MGP_129S1SvImJ_G0018603.1 mouse_genomes_project 11 71148023 71149040 + Mink1 protein_coding retained_intron MGP_129S1SvImJ_T0030312.1 MGP_129S1SvImJ_G0018603.1 mouse_genomes_project 11 71149949 71151001 + Mink1 protein_coding retained_intron MGP_129S1SvImJ_T0030313.1 MGP_129S1SvImJ_G0018603.1 mouse_genomes_project 11 71150342 71152817 + Mink1 protein_coding retained_intron MGP_129S1SvImJ_T0033668.1 MGP_129S1SvImJ_G0019424.1 mouse_genomes_project 11 120435918 120440615 - MGP_129S1SvImJ_P0033668 Foxj1 protein_coding protein_coding MGP_129S1SvImJ_T0099257.1 MGP_129S1SvImJ_G0037324.1 mouse_genomes_project 11 75652880 75652971 - Gm22733 snRNA snRNA MGP_129S1SvImJ_T0033762.1 MGP_129S1SvImJ_G0019442.1 mouse_genomes_project 11 121012757 121015944 - MGP_129S1SvImJ_P0033762 Srsf2 protein_coding protein_coding MGP_129S1SvImJ_T0033763.1 MGP_129S1SvImJ_G0019442.1 mouse_genomes_project 11 121012760 121015069 - Srsf2 protein_coding retained_intron MGP_129S1SvImJ_T0033764.1 MGP_129S1SvImJ_G0019442.1 mouse_genomes_project 11 121012762 121014936 - MGP_129S1SvImJ_P0033764 Srsf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033765.1 MGP_129S1SvImJ_G0019442.1 mouse_genomes_project 11 121012900 121015922 - MGP_129S1SvImJ_P0033765 Srsf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033766.1 MGP_129S1SvImJ_G0019442.1 mouse_genomes_project 11 121012908 121015922 - MGP_129S1SvImJ_P0033766 Srsf2 protein_coding protein_coding MGP_129S1SvImJ_T0033767.1 MGP_129S1SvImJ_G0019442.1 mouse_genomes_project 11 121012962 121014421 - Srsf2 protein_coding processed_transcript MGP_129S1SvImJ_T0034267.1 MGP_129S1SvImJ_G0019543.1 mouse_genomes_project 11 125759033 125766128 - MGP_129S1SvImJ_P0034267 BC017643 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034268.1 MGP_129S1SvImJ_G0019543.1 mouse_genomes_project 11 125759034 125766178 - MGP_129S1SvImJ_P0034268 BC017643 protein_coding protein_coding MGP_129S1SvImJ_T0034269.1 MGP_129S1SvImJ_G0019543.1 mouse_genomes_project 11 125759034 125766174 - MGP_129S1SvImJ_P0034269 BC017643 protein_coding protein_coding MGP_129S1SvImJ_T0034270.1 MGP_129S1SvImJ_G0019543.1 mouse_genomes_project 11 125760111 125765655 - BC017643 protein_coding retained_intron MGP_129S1SvImJ_T0034271.1 MGP_129S1SvImJ_G0019543.1 mouse_genomes_project 11 125760394 125764274 - BC017643 protein_coding retained_intron MGP_129S1SvImJ_T0034272.1 MGP_129S1SvImJ_G0019543.1 mouse_genomes_project 11 125760673 125765964 - MGP_129S1SvImJ_P0034272 BC017643 protein_coding protein_coding MGP_129S1SvImJ_T0034273.1 MGP_129S1SvImJ_G0019543.1 mouse_genomes_project 11 125761017 125766104 - MGP_129S1SvImJ_P0034273 BC017643 protein_coding protein_coding MGP_129S1SvImJ_T0034274.1 MGP_129S1SvImJ_G0019543.1 mouse_genomes_project 11 125761044 125766191 - MGP_129S1SvImJ_P0034274 BC017643 protein_coding protein_coding MGP_129S1SvImJ_T0034275.1 MGP_129S1SvImJ_G0019543.1 mouse_genomes_project 11 125763651 125766092 - BC017643 protein_coding processed_transcript MGP_129S1SvImJ_T0003355.1 MGP_129S1SvImJ_G0003095.1 mouse_genomes_project 11 113375867 113382476 + Gm11683 antisense antisense MGP_129S1SvImJ_T0031565.1 MGP_129S1SvImJ_G0018918.1 mouse_genomes_project 11 89648333 89656320 - MGP_129S1SvImJ_P0031565 Dynll2 protein_coding protein_coding MGP_129S1SvImJ_T0031566.1 MGP_129S1SvImJ_G0018918.1 mouse_genomes_project 11 89648333 89652814 - MGP_129S1SvImJ_P0031566 Dynll2 protein_coding protein_coding MGP_129S1SvImJ_T0031567.1 MGP_129S1SvImJ_G0018918.1 mouse_genomes_project 11 89648333 89655372 - MGP_129S1SvImJ_P0031567 Dynll2 protein_coding protein_coding MGP_129S1SvImJ_T0031568.1 MGP_129S1SvImJ_G0018918.1 mouse_genomes_project 11 89648965 89656143 - MGP_129S1SvImJ_P0031568 Dynll2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033953.1 MGP_129S1SvImJ_G0019482.1 mouse_genomes_project 11 123791041 123893548 + MGP_129S1SvImJ_P0033953 Rnf213 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0033954.1 MGP_129S1SvImJ_G0019482.1 mouse_genomes_project 11 123794594 123893536 + MGP_129S1SvImJ_P0033954 Rnf213 protein_coding protein_coding MGP_129S1SvImJ_T0033955.1 MGP_129S1SvImJ_G0019482.1 mouse_genomes_project 11 123794594 123893539 + MGP_129S1SvImJ_P0033955 Rnf213 protein_coding protein_coding MGP_129S1SvImJ_T0033956.1 MGP_129S1SvImJ_G0019482.1 mouse_genomes_project 11 123884177 123893538 + MGP_129S1SvImJ_P0033956 Rnf213 protein_coding protein_coding MGP_129S1SvImJ_T0009703.1 MGP_129S1SvImJ_G0007819.1 mouse_genomes_project 11 65946942 65947042 - Mir744 miRNA miRNA MGP_129S1SvImJ_T0009753.1 MGP_129S1SvImJ_G0007869.1 mouse_genomes_project 11 100131198 100131269 + Mir6927 miRNA miRNA MGP_129S1SvImJ_T0029703.1 MGP_129S1SvImJ_G0018466.1 mouse_genomes_project 11 63044283 63082529 + MGP_129S1SvImJ_P0029703 Cdrt4 protein_coding protein_coding MGP_129S1SvImJ_T0009777.1 MGP_129S1SvImJ_G0007893.1 mouse_genomes_project 11 119862490 119862553 + Mir5621 miRNA miRNA MGP_129S1SvImJ_T0029832.1 MGP_129S1SvImJ_G0018502.1 mouse_genomes_project 11 68906293 68908353 + MGP_129S1SvImJ_P0029832 Mfsd6l protein_coding protein_coding MGP_129S1SvImJ_T0029595.1 MGP_129S1SvImJ_G0018447.1 mouse_genomes_project 11 61752445 61840573 - MGP_129S1SvImJ_P0029595 Ulk2 protein_coding protein_coding MGP_129S1SvImJ_T0029596.1 MGP_129S1SvImJ_G0018447.1 mouse_genomes_project 11 61754298 61840002 - Ulk2 protein_coding processed_transcript MGP_129S1SvImJ_T0029597.1 MGP_129S1SvImJ_G0018447.1 mouse_genomes_project 11 61781294 61785415 - Ulk2 protein_coding processed_transcript MGP_129S1SvImJ_T0031560.1 MGP_129S1SvImJ_G0018915.1 mouse_genomes_project 11 89503227 89516192 - MGP_129S1SvImJ_P0031560 Epx protein_coding protein_coding MGP_129S1SvImJ_T0031561.1 MGP_129S1SvImJ_G0018915.1 mouse_genomes_project 11 89510057 89512460 - Epx protein_coding processed_transcript MGP_129S1SvImJ_T0100506.1 MGP_129S1SvImJ_G0038573.1 mouse_genomes_project 11 62651855 62651927 + Snord49a snoRNA snoRNA MGP_129S1SvImJ_T0003319.1 MGP_129S1SvImJ_G0003064.1 mouse_genomes_project 11 104479527 104485025 - antisense antisense MGP_129S1SvImJ_T0009694.1 MGP_129S1SvImJ_G0007810.1 mouse_genomes_project 11 55039583 55039639 + Mir7652 miRNA miRNA MGP_129S1SvImJ_T0030487.1 MGP_129S1SvImJ_G0018639.1 mouse_genomes_project 11 73058119 73060667 + MGP_129S1SvImJ_P0030487 Ggt6 protein_coding protein_coding MGP_129S1SvImJ_T0030488.1 MGP_129S1SvImJ_G0018639.1 mouse_genomes_project 11 73058124 73060665 + MGP_129S1SvImJ_P0030488 Ggt6 protein_coding protein_coding MGP_129S1SvImJ_T0012799.1 MGP_129S1SvImJ_G0010888.1 mouse_genomes_project 11 125278299 125287756 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099271.1 MGP_129S1SvImJ_G0037338.1 mouse_genomes_project 11 89032948 89033112 + Gm22068 snRNA snRNA MGP_129S1SvImJ_T0033840.1 MGP_129S1SvImJ_G0019456.1 mouse_genomes_project 11 122133368 122140724 + MGP_129S1SvImJ_P0033840 Birc5 protein_coding protein_coding MGP_129S1SvImJ_T0033841.1 MGP_129S1SvImJ_G0019456.1 mouse_genomes_project 11 122133436 122139254 + MGP_129S1SvImJ_P0033841 Birc5 protein_coding protein_coding MGP_129S1SvImJ_T0033842.1 MGP_129S1SvImJ_G0019456.1 mouse_genomes_project 11 122133468 122139445 + MGP_129S1SvImJ_P0033842 Birc5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0098454.1 MGP_129S1SvImJ_G0036539.1 mouse_genomes_project 11 85146354 85146464 - Gm22311 rRNA rRNA MGP_129S1SvImJ_T0031618.1 MGP_129S1SvImJ_G0018933.1 mouse_genomes_project 11 91182374 91328698 - MGP_129S1SvImJ_P0031618 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0031620.1 MGP_129S1SvImJ_G0018933.1 mouse_genomes_project 11 91216508 91437702 - MGP_129S1SvImJ_P0031620 protein_coding protein_coding MGP_129S1SvImJ_T0031621.1 MGP_129S1SvImJ_G0018933.1 mouse_genomes_project 11 91216607 91340633 - MGP_129S1SvImJ_P0031621 protein_coding protein_coding MGP_129S1SvImJ_T0012719.1 MGP_129S1SvImJ_G0010808.1 mouse_genomes_project 11 88890557 88890829 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028583.1 MGP_129S1SvImJ_G0018163.1 mouse_genomes_project 11 39415046 39421806 - MGP_129S1SvImJ_P0028583 Ccng1 protein_coding protein_coding MGP_129S1SvImJ_T0028584.1 MGP_129S1SvImJ_G0018163.1 mouse_genomes_project 11 39415584 39420433 - Ccng1 protein_coding processed_transcript MGP_129S1SvImJ_T0003285.1 MGP_129S1SvImJ_G0003038.1 mouse_genomes_project 11 97501865 97515706 + Gm11520 antisense antisense MGP_129S1SvImJ_T0003193.1 MGP_129S1SvImJ_G0002965.1 mouse_genomes_project 11 55322258 55644930 + antisense antisense MGP_129S1SvImJ_T0031339.1 MGP_129S1SvImJ_G0018868.1 mouse_genomes_project 11 85550061 85569956 - MGP_129S1SvImJ_P0031339 Gm11437 protein_coding protein_coding MGP_129S1SvImJ_T0012779.1 MGP_129S1SvImJ_G0010868.1 mouse_genomes_project 11 112677565 112678573 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031678.1 MGP_129S1SvImJ_G0018948.1 mouse_genomes_project 11 95985505 96001280 - MGP_129S1SvImJ_P0031678 Nme1 protein_coding protein_coding MGP_129S1SvImJ_T0031679.1 MGP_129S1SvImJ_G0018948.1 mouse_genomes_project 11 95988004 95998775 - MGP_129S1SvImJ_P0031679 Nme1 protein_coding protein_coding MGP_129S1SvImJ_T0031680.1 MGP_129S1SvImJ_G0018948.1 mouse_genomes_project 11 95991285 96001009 - MGP_129S1SvImJ_P0031680 Nme1 protein_coding protein_coding MGP_129S1SvImJ_T0012498.1 MGP_129S1SvImJ_G0010587.1 mouse_genomes_project 11 9435904 9438823 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029343.1 MGP_129S1SvImJ_G0018393.1 mouse_genomes_project 11 59028761 59045598 - MGP_129S1SvImJ_P0029343 Arf1 protein_coding protein_coding MGP_129S1SvImJ_T0029344.1 MGP_129S1SvImJ_G0018393.1 mouse_genomes_project 11 59028763 59045706 - MGP_129S1SvImJ_P0029344 Arf1 protein_coding protein_coding MGP_129S1SvImJ_T0003389.1 MGP_129S1SvImJ_G0003120.1 mouse_genomes_project 11 125174262 125194362 - Gm17178 antisense antisense MGP_129S1SvImJ_T0031693.1 MGP_129S1SvImJ_G0018950.1 mouse_genomes_project 11 96276515 96283418 + MGP_129S1SvImJ_P0031693 Tob1 protein_coding protein_coding MGP_129S1SvImJ_T0028327.1 MGP_129S1SvImJ_G0018101.1 mouse_genomes_project 11 26349968 26562135 - MGP_129S1SvImJ_P0028327 Ccdc85a protein_coding protein_coding MGP_129S1SvImJ_T0028328.1 MGP_129S1SvImJ_G0018101.1 mouse_genomes_project 11 26349975 26562135 - MGP_129S1SvImJ_P0028328 Ccdc85a protein_coding protein_coding MGP_129S1SvImJ_T0028329.1 MGP_129S1SvImJ_G0018101.1 mouse_genomes_project 11 26349975 26562163 - MGP_129S1SvImJ_P0028329 Ccdc85a protein_coding protein_coding MGP_129S1SvImJ_T0028330.1 MGP_129S1SvImJ_G0018101.1 mouse_genomes_project 11 26351435 26561834 - MGP_129S1SvImJ_P0028330 Ccdc85a protein_coding protein_coding MGP_129S1SvImJ_T0028331.1 MGP_129S1SvImJ_G0018101.1 mouse_genomes_project 11 26353127 26554277 - MGP_129S1SvImJ_P0028331 Ccdc85a protein_coding protein_coding MGP_129S1SvImJ_T0028332.1 MGP_129S1SvImJ_G0018101.1 mouse_genomes_project 11 26553036 26562105 - Ccdc85a protein_coding retained_intron MGP_129S1SvImJ_T0003295.1 MGP_129S1SvImJ_G0003046.1 mouse_genomes_project 11 98656169 98667811 - Hoxb3os antisense antisense MGP_129S1SvImJ_T0003296.1 MGP_129S1SvImJ_G0003046.1 mouse_genomes_project 11 98658578 98661021 - Hoxb3os antisense antisense MGP_129S1SvImJ_T0009665.1 MGP_129S1SvImJ_G0007781.1 mouse_genomes_project 11 14023883 14023984 - Gm24714 miRNA miRNA MGP_129S1SvImJ_T0031503.1 MGP_129S1SvImJ_G0018906.1 mouse_genomes_project 11 89195159 89212951 + MGP_129S1SvImJ_P0031503 Sept4 protein_coding protein_coding MGP_129S1SvImJ_T0031504.1 MGP_129S1SvImJ_G0018906.1 mouse_genomes_project 11 89204669 89216899 + Sept4 protein_coding retained_intron MGP_129S1SvImJ_T0031505.1 MGP_129S1SvImJ_G0018906.1 mouse_genomes_project 11 89204704 89218252 + Sept4 protein_coding retained_intron MGP_129S1SvImJ_T0031506.1 MGP_129S1SvImJ_G0018906.1 mouse_genomes_project 11 89204713 89213741 + Sept4 protein_coding retained_intron MGP_129S1SvImJ_T0031507.1 MGP_129S1SvImJ_G0018906.1 mouse_genomes_project 11 89204727 89218252 + Sept4 protein_coding retained_intron MGP_129S1SvImJ_T0031508.1 MGP_129S1SvImJ_G0018906.1 mouse_genomes_project 11 89204741 89213569 + Sept4 protein_coding retained_intron MGP_129S1SvImJ_T0031509.1 MGP_129S1SvImJ_G0018906.1 mouse_genomes_project 11 89204792 89218258 + MGP_129S1SvImJ_P0031509 Sept4 protein_coding protein_coding MGP_129S1SvImJ_T0031510.1 MGP_129S1SvImJ_G0018906.1 mouse_genomes_project 11 89205185 89216987 + MGP_129S1SvImJ_P0031510 Sept4 protein_coding protein_coding MGP_129S1SvImJ_T0031511.1 MGP_129S1SvImJ_G0018906.1 mouse_genomes_project 11 89208787 89218252 + MGP_129S1SvImJ_P0031511 Sept4 protein_coding protein_coding MGP_129S1SvImJ_T0031512.1 MGP_129S1SvImJ_G0018906.1 mouse_genomes_project 11 89208807 89218088 + MGP_129S1SvImJ_P0031512 Sept4 protein_coding protein_coding MGP_129S1SvImJ_T0031513.1 MGP_129S1SvImJ_G0018906.1 mouse_genomes_project 11 89208815 89213741 + Sept4 protein_coding retained_intron MGP_129S1SvImJ_T0031514.1 MGP_129S1SvImJ_G0018906.1 mouse_genomes_project 11 89208820 89218252 + Sept4 protein_coding retained_intron MGP_129S1SvImJ_T0031515.1 MGP_129S1SvImJ_G0018906.1 mouse_genomes_project 11 89209955 89216754 + MGP_129S1SvImJ_P0031515 Sept4 protein_coding protein_coding MGP_129S1SvImJ_T0031516.1 MGP_129S1SvImJ_G0018906.1 mouse_genomes_project 11 89212934 89217577 + Sept4 protein_coding retained_intron MGP_129S1SvImJ_T0031517.1 MGP_129S1SvImJ_G0018906.1 mouse_genomes_project 11 89216580 89217707 + Sept4 protein_coding retained_intron MGP_129S1SvImJ_T0031518.1 MGP_129S1SvImJ_G0018906.1 mouse_genomes_project 11 89217189 89218252 + Sept4 protein_coding processed_transcript MGP_129S1SvImJ_T0029116.1 MGP_129S1SvImJ_G0018313.1 mouse_genomes_project 11 53736422 53738398 - MGP_129S1SvImJ_P0029116 Il3 protein_coding protein_coding MGP_129S1SvImJ_T0006317.1 MGP_129S1SvImJ_G0005273.1 mouse_genomes_project 11 86204986 86218952 - Gm11431 lincRNA lincRNA MGP_129S1SvImJ_T0012703.1 MGP_129S1SvImJ_G0010792.1 mouse_genomes_project 11 81021775 81022516 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031975.1 MGP_129S1SvImJ_G0019023.1 mouse_genomes_project 11 99431594 99449696 + MGP_129S1SvImJ_P0031975 Osbpl7 protein_coding protein_coding MGP_129S1SvImJ_T0031976.1 MGP_129S1SvImJ_G0019023.1 mouse_genomes_project 11 99431786 99433790 + Osbpl7 protein_coding processed_transcript MGP_129S1SvImJ_T0031977.1 MGP_129S1SvImJ_G0019023.1 mouse_genomes_project 11 99431786 99449696 + MGP_129S1SvImJ_P0031977 Osbpl7 protein_coding protein_coding MGP_129S1SvImJ_T0031978.1 MGP_129S1SvImJ_G0019023.1 mouse_genomes_project 11 99433292 99433942 + Osbpl7 protein_coding retained_intron MGP_129S1SvImJ_T0031979.1 MGP_129S1SvImJ_G0019023.1 mouse_genomes_project 11 99434177 99438147 + Osbpl7 protein_coding retained_intron MGP_129S1SvImJ_T0031980.1 MGP_129S1SvImJ_G0019023.1 mouse_genomes_project 11 99447674 99449063 + Osbpl7 protein_coding retained_intron MGP_129S1SvImJ_T0030497.1 MGP_129S1SvImJ_G0018641.1 mouse_genomes_project 11 73075216 73113491 - MGP_129S1SvImJ_P0030497 Spns2 protein_coding protein_coding MGP_129S1SvImJ_T0030498.1 MGP_129S1SvImJ_G0018641.1 mouse_genomes_project 11 73075220 73078120 - Spns2 protein_coding retained_intron MGP_129S1SvImJ_T0030499.1 MGP_129S1SvImJ_G0018641.1 mouse_genomes_project 11 73076186 73079929 - Spns2 protein_coding processed_transcript MGP_129S1SvImJ_T0030500.1 MGP_129S1SvImJ_G0018641.1 mouse_genomes_project 11 73076310 73080200 - MGP_129S1SvImJ_P0030500 Spns2 protein_coding protein_coding MGP_129S1SvImJ_T0030501.1 MGP_129S1SvImJ_G0018641.1 mouse_genomes_project 11 73076419 73077697 - Spns2 protein_coding processed_transcript MGP_129S1SvImJ_T0030502.1 MGP_129S1SvImJ_G0018641.1 mouse_genomes_project 11 73082607 73098600 - Spns2 protein_coding processed_transcript MGP_129S1SvImJ_T0028064.1 MGP_129S1SvImJ_G0018041.1 mouse_genomes_project 11 6440300 6474348 + Abca13 protein_coding processed_transcript MGP_129S1SvImJ_T0028065.1 MGP_129S1SvImJ_G0018041.1 mouse_genomes_project 11 6440300 6945890 + MGP_129S1SvImJ_P0028065 Abca13 protein_coding protein_coding MGP_129S1SvImJ_T0028066.1 MGP_129S1SvImJ_G0018041.1 mouse_genomes_project 11 6441810 6506106 + MGP_129S1SvImJ_P0028066 Abca13 protein_coding protein_coding MGP_129S1SvImJ_T0012710.1 MGP_129S1SvImJ_G0010799.1 mouse_genomes_project 11 84015850 84016252 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012695.1 MGP_129S1SvImJ_G0010784.1 mouse_genomes_project 11 78694617 78696432 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017283.1 MGP_129S1SvImJ_G0015205.1 mouse_genomes_project 11 100597040 100598008 - Gm11632 processed_transcript processed_transcript MGP_129S1SvImJ_T0030515.1 MGP_129S1SvImJ_G0018645.1 mouse_genomes_project 11 73428163 73446758 - MGP_129S1SvImJ_P0030515 Cyb5d2 protein_coding protein_coding MGP_129S1SvImJ_T0030516.1 MGP_129S1SvImJ_G0018645.1 mouse_genomes_project 11 73429676 73446604 - MGP_129S1SvImJ_P0030516 Cyb5d2 protein_coding protein_coding MGP_129S1SvImJ_T0030517.1 MGP_129S1SvImJ_G0018645.1 mouse_genomes_project 11 73429815 73447000 - Cyb5d2 protein_coding processed_transcript MGP_129S1SvImJ_T0030518.1 MGP_129S1SvImJ_G0018645.1 mouse_genomes_project 11 73443790 73446743 - Cyb5d2 protein_coding retained_intron MGP_129S1SvImJ_T0031526.1 MGP_129S1SvImJ_G0018909.1 mouse_genomes_project 11 89294209 89361155 + Rnf43 protein_coding retained_intron MGP_129S1SvImJ_T0031527.1 MGP_129S1SvImJ_G0018909.1 mouse_genomes_project 11 89294574 89349693 + Rnf43 protein_coding processed_transcript MGP_129S1SvImJ_T0031528.1 MGP_129S1SvImJ_G0018909.1 mouse_genomes_project 11 89296036 89365761 + MGP_129S1SvImJ_P0031528 Rnf43 protein_coding protein_coding MGP_129S1SvImJ_T0031529.1 MGP_129S1SvImJ_G0018909.1 mouse_genomes_project 11 89296103 89365420 + MGP_129S1SvImJ_P0031529 Rnf43 protein_coding protein_coding MGP_129S1SvImJ_T0031530.1 MGP_129S1SvImJ_G0018909.1 mouse_genomes_project 11 89358649 89361747 + Rnf43 protein_coding retained_intron MGP_129S1SvImJ_T0031531.1 MGP_129S1SvImJ_G0018909.1 mouse_genomes_project 11 89360594 89362334 + Rnf43 protein_coding retained_intron MGP_129S1SvImJ_T0031532.1 MGP_129S1SvImJ_G0018909.1 mouse_genomes_project 11 89365140 89365689 + Rnf43 protein_coding processed_transcript MGP_129S1SvImJ_T0029564.1 MGP_129S1SvImJ_G0018441.1 mouse_genomes_project 11 61469709 61477502 + MGP_129S1SvImJ_P0029564 B9d1 protein_coding protein_coding MGP_129S1SvImJ_T0029565.1 MGP_129S1SvImJ_G0018441.1 mouse_genomes_project 11 61469768 61477502 + B9d1 protein_coding processed_transcript MGP_129S1SvImJ_T0029566.1 MGP_129S1SvImJ_G0018441.1 mouse_genomes_project 11 61469817 61472994 + B9d1 protein_coding processed_transcript MGP_129S1SvImJ_T0029567.1 MGP_129S1SvImJ_G0018441.1 mouse_genomes_project 11 61469820 61477502 + B9d1 protein_coding processed_transcript MGP_129S1SvImJ_T0029568.1 MGP_129S1SvImJ_G0018441.1 mouse_genomes_project 11 61473681 61477502 + MGP_129S1SvImJ_P0029568 B9d1 protein_coding protein_coding MGP_129S1SvImJ_T0029569.1 MGP_129S1SvImJ_G0018441.1 mouse_genomes_project 11 61476885 61477502 + B9d1 protein_coding processed_transcript MGP_129S1SvImJ_T0012544.1 MGP_129S1SvImJ_G0010633.1 mouse_genomes_project 11 24268534 24269762 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033044.1 MGP_129S1SvImJ_G0019297.1 mouse_genomes_project 11 109479047 109499718 - MGP_129S1SvImJ_P0033044 Ccdc47 protein_coding protein_coding MGP_129S1SvImJ_T0033045.1 MGP_129S1SvImJ_G0019297.1 mouse_genomes_project 11 109483374 109487026 - MGP_129S1SvImJ_P0033045 Ccdc47 protein_coding protein_coding MGP_129S1SvImJ_T0033046.1 MGP_129S1SvImJ_G0019297.1 mouse_genomes_project 11 109484213 109488033 - MGP_129S1SvImJ_P0033046 Ccdc47 protein_coding protein_coding MGP_129S1SvImJ_T0033047.1 MGP_129S1SvImJ_G0019297.1 mouse_genomes_project 11 109484602 109485503 - MGP_129S1SvImJ_P0033047 Ccdc47 protein_coding protein_coding MGP_129S1SvImJ_T0033048.1 MGP_129S1SvImJ_G0019297.1 mouse_genomes_project 11 109486890 109488140 - Ccdc47 protein_coding processed_transcript MGP_129S1SvImJ_T0034282.1 MGP_129S1SvImJ_G0019546.1 mouse_genomes_project 11 125864055 125904725 - MGP_129S1SvImJ_P0034282 Wdr45b protein_coding protein_coding MGP_129S1SvImJ_T0034283.1 MGP_129S1SvImJ_G0019546.1 mouse_genomes_project 11 125868247 125883460 - Wdr45b protein_coding processed_transcript MGP_129S1SvImJ_T0034284.1 MGP_129S1SvImJ_G0019546.1 mouse_genomes_project 11 125871108 125904621 - MGP_129S1SvImJ_P0034284 Wdr45b protein_coding protein_coding MGP_129S1SvImJ_T0034285.1 MGP_129S1SvImJ_G0019546.1 mouse_genomes_project 11 125875418 125904673 - MGP_129S1SvImJ_P0034285 Wdr45b protein_coding protein_coding MGP_129S1SvImJ_T0034286.1 MGP_129S1SvImJ_G0019546.1 mouse_genomes_project 11 125895379 125904681 - Wdr45b protein_coding retained_intron MGP_129S1SvImJ_T0031075.1 MGP_129S1SvImJ_G0018789.1 mouse_genomes_project 11 79787147 79788371 - MGP_129S1SvImJ_P0031075 Fam58b protein_coding protein_coding MGP_129S1SvImJ_T0006282.1 MGP_129S1SvImJ_G0005249.1 mouse_genomes_project 11 71308722 71317407 - Gm12320 lincRNA lincRNA MGP_129S1SvImJ_T0003365.1 MGP_129S1SvImJ_G0003104.1 mouse_genomes_project 11 120913053 120920193 + BC018473 antisense antisense MGP_129S1SvImJ_T0003366.1 MGP_129S1SvImJ_G0003104.1 mouse_genomes_project 11 120913055 120916729 + BC018473 antisense antisense MGP_129S1SvImJ_T0003367.1 MGP_129S1SvImJ_G0003104.1 mouse_genomes_project 11 120913235 120916729 + BC018473 antisense antisense MGP_129S1SvImJ_T0003368.1 MGP_129S1SvImJ_G0003104.1 mouse_genomes_project 11 120913849 120916729 + BC018473 antisense antisense MGP_129S1SvImJ_T0032433.1 MGP_129S1SvImJ_G0019173.1 mouse_genomes_project 11 103670216 103729564 - MGP_129S1SvImJ_P0032433 Stat3 protein_coding protein_coding MGP_129S1SvImJ_T0032434.1 MGP_129S1SvImJ_G0019173.1 mouse_genomes_project 11 103671632 103673723 - Stat3 protein_coding retained_intron MGP_129S1SvImJ_T0032435.1 MGP_129S1SvImJ_G0019173.1 mouse_genomes_project 11 103671646 103729374 - MGP_129S1SvImJ_P0032435 Stat3 protein_coding protein_coding MGP_129S1SvImJ_T0032436.1 MGP_129S1SvImJ_G0019173.1 mouse_genomes_project 11 103672091 103729473 - MGP_129S1SvImJ_P0032436 Stat3 protein_coding protein_coding MGP_129S1SvImJ_T0032437.1 MGP_129S1SvImJ_G0019173.1 mouse_genomes_project 11 103672888 103677154 - Stat3 protein_coding retained_intron MGP_129S1SvImJ_T0032438.1 MGP_129S1SvImJ_G0019173.1 mouse_genomes_project 11 103676439 103677213 - Stat3 protein_coding retained_intron MGP_129S1SvImJ_T0032439.1 MGP_129S1SvImJ_G0019173.1 mouse_genomes_project 11 103676934 103677844 - Stat3 protein_coding retained_intron MGP_129S1SvImJ_T0032440.1 MGP_129S1SvImJ_G0019173.1 mouse_genomes_project 11 103677381 103683996 - Stat3 protein_coding processed_transcript MGP_129S1SvImJ_T0032441.1 MGP_129S1SvImJ_G0019173.1 mouse_genomes_project 11 103677897 103678532 - Stat3 protein_coding retained_intron MGP_129S1SvImJ_T0032442.1 MGP_129S1SvImJ_G0019173.1 mouse_genomes_project 11 103677899 103683217 - Stat3 protein_coding retained_intron MGP_129S1SvImJ_T0032443.1 MGP_129S1SvImJ_G0019173.1 mouse_genomes_project 11 103687425 103691260 - Stat3 protein_coding retained_intron MGP_129S1SvImJ_T0032444.1 MGP_129S1SvImJ_G0019173.1 mouse_genomes_project 11 103690928 103691695 - Stat3 protein_coding retained_intron MGP_129S1SvImJ_T0032445.1 MGP_129S1SvImJ_G0019173.1 mouse_genomes_project 11 103691504 103694074 - Stat3 protein_coding retained_intron MGP_129S1SvImJ_T0028034.1 MGP_129S1SvImJ_G0018032.1 mouse_genomes_project 11 4256291 4379151 + MGP_129S1SvImJ_P0028034 Adcy1 protein_coding protein_coding MGP_129S1SvImJ_T0028035.1 MGP_129S1SvImJ_G0018032.1 mouse_genomes_project 11 4360528 4373523 + Adcy1 protein_coding processed_transcript MGP_129S1SvImJ_T0006349.1 MGP_129S1SvImJ_G0005294.1 mouse_genomes_project 11 100370022 100379219 + Gm11630 lincRNA lincRNA MGP_129S1SvImJ_T0029871.1 MGP_129S1SvImJ_G0018511.1 mouse_genomes_project 11 69363834 69366959 - Rangrf protein_coding processed_transcript MGP_129S1SvImJ_T0029872.1 MGP_129S1SvImJ_G0018511.1 mouse_genomes_project 11 69363834 69364786 - Rangrf protein_coding processed_transcript MGP_129S1SvImJ_T0029873.1 MGP_129S1SvImJ_G0018511.1 mouse_genomes_project 11 69363834 69365563 - Rangrf protein_coding processed_transcript MGP_129S1SvImJ_T0029874.1 MGP_129S1SvImJ_G0018511.1 mouse_genomes_project 11 69363834 69365617 - MGP_129S1SvImJ_P0029874 Rangrf protein_coding protein_coding MGP_129S1SvImJ_T0029875.1 MGP_129S1SvImJ_G0018511.1 mouse_genomes_project 11 69363837 69365117 - Rangrf protein_coding processed_transcript MGP_129S1SvImJ_T0029876.1 MGP_129S1SvImJ_G0018511.1 mouse_genomes_project 11 69363838 69365219 - Rangrf protein_coding processed_transcript MGP_129S1SvImJ_T0029877.1 MGP_129S1SvImJ_G0018511.1 mouse_genomes_project 11 69363845 69365142 - Rangrf protein_coding processed_transcript MGP_129S1SvImJ_T0029878.1 MGP_129S1SvImJ_G0018511.1 mouse_genomes_project 11 69363848 69364970 - Rangrf protein_coding processed_transcript MGP_129S1SvImJ_T0033790.1 MGP_129S1SvImJ_G0019446.1 mouse_genomes_project 11 121408467 121594644 + MGP_129S1SvImJ_P0033790 Sept9 protein_coding protein_coding MGP_129S1SvImJ_T0033791.1 MGP_129S1SvImJ_G0019446.1 mouse_genomes_project 11 121452811 121594632 + MGP_129S1SvImJ_P0033791 Sept9 protein_coding protein_coding MGP_129S1SvImJ_T0033792.1 MGP_129S1SvImJ_G0019446.1 mouse_genomes_project 11 121487094 121594639 + MGP_129S1SvImJ_P0033792 Sept9 protein_coding protein_coding MGP_129S1SvImJ_T0033793.1 MGP_129S1SvImJ_G0019446.1 mouse_genomes_project 11 121538753 121584528 + MGP_129S1SvImJ_P0033793 Sept9 protein_coding protein_coding MGP_129S1SvImJ_T0033794.1 MGP_129S1SvImJ_G0019446.1 mouse_genomes_project 11 121557031 121588692 + MGP_129S1SvImJ_P0033794 Sept9 protein_coding protein_coding MGP_129S1SvImJ_T0033795.1 MGP_129S1SvImJ_G0019446.1 mouse_genomes_project 11 121564599 121593945 + Sept9 protein_coding retained_intron MGP_129S1SvImJ_T0033796.1 MGP_129S1SvImJ_G0019446.1 mouse_genomes_project 11 121585495 121589315 + Sept9 protein_coding retained_intron MGP_129S1SvImJ_T0033797.1 MGP_129S1SvImJ_G0019446.1 mouse_genomes_project 11 121591675 121593182 + Sept9 protein_coding retained_intron MGP_129S1SvImJ_T0032713.1 MGP_129S1SvImJ_G0019229.1 mouse_genomes_project 11 105246407 105250712 + MGP_129S1SvImJ_P0032713 Tmub2 protein_coding protein_coding MGP_129S1SvImJ_T0032714.1 MGP_129S1SvImJ_G0019229.1 mouse_genomes_project 11 105246415 105249686 + Tmub2 protein_coding processed_transcript MGP_129S1SvImJ_T0032715.1 MGP_129S1SvImJ_G0019229.1 mouse_genomes_project 11 105246415 105250712 + MGP_129S1SvImJ_P0032715 Tmub2 protein_coding protein_coding MGP_129S1SvImJ_T0032716.1 MGP_129S1SvImJ_G0019229.1 mouse_genomes_project 11 105246427 105248866 + Tmub2 protein_coding processed_transcript MGP_129S1SvImJ_T0032717.1 MGP_129S1SvImJ_G0019229.1 mouse_genomes_project 11 105246672 105250712 + MGP_129S1SvImJ_P0032717 Tmub2 protein_coding protein_coding MGP_129S1SvImJ_T0032847.1 MGP_129S1SvImJ_G0019252.1 mouse_genomes_project 11 106030918 106057255 - MGP_129S1SvImJ_P0032847 Dcakd protein_coding protein_coding MGP_129S1SvImJ_T0032848.1 MGP_129S1SvImJ_G0019252.1 mouse_genomes_project 11 106030920 106034429 - Dcakd protein_coding retained_intron MGP_129S1SvImJ_T0032849.1 MGP_129S1SvImJ_G0019252.1 mouse_genomes_project 11 106036524 106069526 - MGP_129S1SvImJ_P0032849 Dcakd protein_coding protein_coding MGP_129S1SvImJ_T0032850.1 MGP_129S1SvImJ_G0019252.1 mouse_genomes_project 11 106068209 106069485 - Dcakd protein_coding retained_intron MGP_129S1SvImJ_T0032851.1 MGP_129S1SvImJ_G0019252.1 mouse_genomes_project 11 106068483 106069555 - Dcakd protein_coding processed_transcript MGP_129S1SvImJ_T0032287.1 MGP_129S1SvImJ_G0019117.1 mouse_genomes_project 11 102496951 102497856 - MGP_129S1SvImJ_P0032287 protein_coding protein_coding MGP_129S1SvImJ_T0003167.1 MGP_129S1SvImJ_G0002942.1 mouse_genomes_project 11 43512785 43515939 - Gm12158 antisense antisense MGP_129S1SvImJ_T0099296.1 MGP_129S1SvImJ_G0037363.1 mouse_genomes_project 11 122498915 122499010 - Gm24060 snRNA snRNA MGP_129S1SvImJ_T0033290.1 MGP_129S1SvImJ_G0019350.1 mouse_genomes_project 11 117441645 117449962 + MGP_129S1SvImJ_P0033290 Sstr2 protein_coding protein_coding MGP_129S1SvImJ_T0033291.1 MGP_129S1SvImJ_G0019350.1 mouse_genomes_project 11 117441779 117449831 + MGP_129S1SvImJ_P0033291 Sstr2 protein_coding protein_coding MGP_129S1SvImJ_T0033292.1 MGP_129S1SvImJ_G0019350.1 mouse_genomes_project 11 117448192 117449572 + MGP_129S1SvImJ_P0033292 Sstr2 protein_coding protein_coding MGP_129S1SvImJ_T0027940.1 MGP_129S1SvImJ_G0018011.1 mouse_genomes_project 11 2983382 2985527 - MGP_129S1SvImJ_P0027940 Myl7 protein_coding protein_coding MGP_129S1SvImJ_T0009781.1 MGP_129S1SvImJ_G0007897.1 mouse_genomes_project 11 123193770 123193836 - Gm25040 miRNA miRNA MGP_129S1SvImJ_T0032270.1 MGP_129S1SvImJ_G0019100.1 mouse_genomes_project 11 102241889 102242496 - MGP_129S1SvImJ_P0032270 Krtap3-1 protein_coding protein_coding MGP_129S1SvImJ_T0027925.1 MGP_129S1SvImJ_G0018007.1 mouse_genomes_project 11 2884574 2886667 - MGP_129S1SvImJ_P0027925 Pgam2 protein_coding protein_coding MGP_129S1SvImJ_T0100537.1 MGP_129S1SvImJ_G0038604.1 mouse_genomes_project 11 107394305 107394438 - Gm22743 snoRNA snoRNA MGP_129S1SvImJ_T0028105.1 MGP_129S1SvImJ_G0018049.1 mouse_genomes_project 11 9550044 9786937 - MGP_129S1SvImJ_P0028105 Cobl protein_coding protein_coding MGP_129S1SvImJ_T0028106.1 MGP_129S1SvImJ_G0018049.1 mouse_genomes_project 11 9550112 9786992 - MGP_129S1SvImJ_P0028106 Cobl protein_coding protein_coding MGP_129S1SvImJ_T0028107.1 MGP_129S1SvImJ_G0018049.1 mouse_genomes_project 11 9550112 9787090 - MGP_129S1SvImJ_P0028107 Cobl protein_coding protein_coding MGP_129S1SvImJ_T0028108.1 MGP_129S1SvImJ_G0018049.1 mouse_genomes_project 11 9550114 9731391 - MGP_129S1SvImJ_P0028108 Cobl protein_coding protein_coding MGP_129S1SvImJ_T0028109.1 MGP_129S1SvImJ_G0018049.1 mouse_genomes_project 11 9550114 9787093 - MGP_129S1SvImJ_P0028109 Cobl protein_coding protein_coding MGP_129S1SvImJ_T0028110.1 MGP_129S1SvImJ_G0018049.1 mouse_genomes_project 11 9550547 9786933 - MGP_129S1SvImJ_P0028110 Cobl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028111.1 MGP_129S1SvImJ_G0018049.1 mouse_genomes_project 11 9581459 9687560 - MGP_129S1SvImJ_P0028111 Cobl protein_coding protein_coding MGP_129S1SvImJ_T0028112.1 MGP_129S1SvImJ_G0018049.1 mouse_genomes_project 11 9610814 9687508 - MGP_129S1SvImJ_P0028112 Cobl protein_coding protein_coding MGP_129S1SvImJ_T0028113.1 MGP_129S1SvImJ_G0018049.1 mouse_genomes_project 11 9619294 9786885 - Cobl protein_coding retained_intron MGP_129S1SvImJ_T0028114.1 MGP_129S1SvImJ_G0018049.1 mouse_genomes_project 11 9659410 9697365 - MGP_129S1SvImJ_P0028114 Cobl protein_coding protein_coding MGP_129S1SvImJ_T0012713.1 MGP_129S1SvImJ_G0010802.1 mouse_genomes_project 11 86551454 86551981 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031301.1 MGP_129S1SvImJ_G0018856.1 mouse_genomes_project 11 85011870 85013382 - MGP_129S1SvImJ_P0031301 Ccl3 protein_coding protein_coding MGP_129S1SvImJ_T0006259.1 MGP_129S1SvImJ_G0005230.1 mouse_genomes_project 11 57627329 57630259 - Gm12249 lincRNA lincRNA MGP_129S1SvImJ_T0033057.1 MGP_129S1SvImJ_G0019300.1 mouse_genomes_project 11 109545065 109553205 + MGP_129S1SvImJ_P0033057 Psmc5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033058.1 MGP_129S1SvImJ_G0019300.1 mouse_genomes_project 11 109545065 109553205 + MGP_129S1SvImJ_P0033058 Psmc5 protein_coding protein_coding MGP_129S1SvImJ_T0099229.1 MGP_129S1SvImJ_G0037296.1 mouse_genomes_project 11 21555190 21555335 - Gm23827 snRNA snRNA MGP_129S1SvImJ_T0029761.1 MGP_129S1SvImJ_G0018484.1 mouse_genomes_project 11 67329436 67342901 + MGP_129S1SvImJ_P0029761 Sco1 protein_coding protein_coding MGP_129S1SvImJ_T0029762.1 MGP_129S1SvImJ_G0018484.1 mouse_genomes_project 11 67329436 67343142 + MGP_129S1SvImJ_P0029762 Sco1 protein_coding protein_coding MGP_129S1SvImJ_T0029763.1 MGP_129S1SvImJ_G0018484.1 mouse_genomes_project 11 67330533 67340835 + Sco1 protein_coding processed_transcript MGP_129S1SvImJ_T0029764.1 MGP_129S1SvImJ_G0018484.1 mouse_genomes_project 11 67335085 67344640 + Sco1 protein_coding processed_transcript MGP_129S1SvImJ_T0031199.1 MGP_129S1SvImJ_G0018824.1 mouse_genomes_project 11 83350696 83352252 + MGP_129S1SvImJ_P0031199 Ccl12 protein_coding protein_coding MGP_129S1SvImJ_T0031200.1 MGP_129S1SvImJ_G0018824.1 mouse_genomes_project 11 83350703 83352219 + Ccl12 protein_coding processed_transcript MGP_129S1SvImJ_T0032278.1 MGP_129S1SvImJ_G0019108.1 mouse_genomes_project 11 102328582 102329566 - MGP_129S1SvImJ_P0032278 Krtap4-7 protein_coding protein_coding MGP_129S1SvImJ_T0012519.1 MGP_129S1SvImJ_G0010608.1 mouse_genomes_project 11 16822135 16823174 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009765.1 MGP_129S1SvImJ_G0007881.1 mouse_genomes_project 11 105664850 105664959 - Gm22920 miRNA miRNA MGP_129S1SvImJ_T0012574.1 MGP_129S1SvImJ_G0010663.1 mouse_genomes_project 11 31457255 31457702 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006343.1 MGP_129S1SvImJ_G0005292.1 mouse_genomes_project 11 98558575 98571844 + Gm53 lincRNA lincRNA MGP_129S1SvImJ_T0006344.1 MGP_129S1SvImJ_G0005292.1 mouse_genomes_project 11 98559092 98572058 + Gm53 lincRNA lincRNA MGP_129S1SvImJ_T0006345.1 MGP_129S1SvImJ_G0005292.1 mouse_genomes_project 11 98559980 98569053 + Gm53 lincRNA lincRNA MGP_129S1SvImJ_T0006346.1 MGP_129S1SvImJ_G0005292.1 mouse_genomes_project 11 98568969 98572228 + Gm53 lincRNA lincRNA MGP_129S1SvImJ_T0030173.1 MGP_129S1SvImJ_G0018576.1 mouse_genomes_project 11 70492757 70499592 + MGP_129S1SvImJ_P0030173 Phf23 protein_coding protein_coding MGP_129S1SvImJ_T0030174.1 MGP_129S1SvImJ_G0018576.1 mouse_genomes_project 11 70492875 70497959 + Phf23 protein_coding retained_intron MGP_129S1SvImJ_T0030175.1 MGP_129S1SvImJ_G0018576.1 mouse_genomes_project 11 70492901 70499589 + MGP_129S1SvImJ_P0030175 Phf23 protein_coding protein_coding MGP_129S1SvImJ_T0030176.1 MGP_129S1SvImJ_G0018576.1 mouse_genomes_project 11 70493612 70498334 + MGP_129S1SvImJ_P0030176 Phf23 protein_coding protein_coding MGP_129S1SvImJ_T0030177.1 MGP_129S1SvImJ_G0018576.1 mouse_genomes_project 11 70495272 70498079 + Phf23 protein_coding processed_transcript MGP_129S1SvImJ_T0030178.1 MGP_129S1SvImJ_G0018576.1 mouse_genomes_project 11 70495288 70497980 + Phf23 protein_coding processed_transcript MGP_129S1SvImJ_T0028658.1 MGP_129S1SvImJ_G0018183.1 mouse_genomes_project 11 43468713 43881089 + MGP_129S1SvImJ_P0028658 Ebf1 protein_coding protein_coding MGP_129S1SvImJ_T0028659.1 MGP_129S1SvImJ_G0018183.1 mouse_genomes_project 11 43468713 43877183 + MGP_129S1SvImJ_P0028659 Ebf1 protein_coding protein_coding MGP_129S1SvImJ_T0028660.1 MGP_129S1SvImJ_G0018183.1 mouse_genomes_project 11 43468713 43876649 + MGP_129S1SvImJ_P0028660 Ebf1 protein_coding protein_coding MGP_129S1SvImJ_T0028661.1 MGP_129S1SvImJ_G0018183.1 mouse_genomes_project 11 43469502 43496031 + Ebf1 protein_coding processed_transcript MGP_129S1SvImJ_T0028662.1 MGP_129S1SvImJ_G0018183.1 mouse_genomes_project 11 43469502 43499420 + Ebf1 protein_coding processed_transcript MGP_129S1SvImJ_T0028663.1 MGP_129S1SvImJ_G0018183.1 mouse_genomes_project 11 43473027 43496021 + Ebf1 protein_coding processed_transcript MGP_129S1SvImJ_T0028664.1 MGP_129S1SvImJ_G0018183.1 mouse_genomes_project 11 43779430 43841433 + Ebf1 protein_coding processed_transcript MGP_129S1SvImJ_T0031356.1 MGP_129S1SvImJ_G0018872.1 mouse_genomes_project 11 86270028 86278130 - MGP_129S1SvImJ_P0031356 Dhrs11 protein_coding protein_coding MGP_129S1SvImJ_T0031357.1 MGP_129S1SvImJ_G0018872.1 mouse_genomes_project 11 86271164 86278160 - MGP_129S1SvImJ_P0031357 Dhrs11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033591.1 MGP_129S1SvImJ_G0019411.1 mouse_genomes_project 11 120114820 120147738 + MGP_129S1SvImJ_P0033591 Unk protein_coding protein_coding MGP_129S1SvImJ_T0033592.1 MGP_129S1SvImJ_G0019411.1 mouse_genomes_project 11 120114820 120147738 + MGP_129S1SvImJ_P0033592 Unk protein_coding protein_coding MGP_129S1SvImJ_T0033593.1 MGP_129S1SvImJ_G0019411.1 mouse_genomes_project 11 120114821 120126524 + Unk protein_coding processed_transcript MGP_129S1SvImJ_T0033594.1 MGP_129S1SvImJ_G0019411.1 mouse_genomes_project 11 120123156 120147738 + Unk protein_coding processed_transcript MGP_129S1SvImJ_T0033595.1 MGP_129S1SvImJ_G0019411.1 mouse_genomes_project 11 120135818 120140202 + Unk protein_coding retained_intron MGP_129S1SvImJ_T0033596.1 MGP_129S1SvImJ_G0019411.1 mouse_genomes_project 11 120139818 120142591 + Unk protein_coding retained_intron MGP_129S1SvImJ_T0033597.1 MGP_129S1SvImJ_G0019411.1 mouse_genomes_project 11 120142421 120145630 + Unk protein_coding retained_intron MGP_129S1SvImJ_T0034244.1 MGP_129S1SvImJ_G0019536.1 mouse_genomes_project 11 125583548 125594193 - MGP_129S1SvImJ_P0034244 Sectm1b protein_coding protein_coding MGP_129S1SvImJ_T0034245.1 MGP_129S1SvImJ_G0019536.1 mouse_genomes_project 11 125584621 125594162 - MGP_129S1SvImJ_P0034245 Sectm1b protein_coding protein_coding MGP_129S1SvImJ_T0034246.1 MGP_129S1SvImJ_G0019536.1 mouse_genomes_project 11 125584626 125586454 - MGP_129S1SvImJ_P0034246 Sectm1b protein_coding protein_coding MGP_129S1SvImJ_T0034247.1 MGP_129S1SvImJ_G0019536.1 mouse_genomes_project 11 125584672 125594169 - MGP_129S1SvImJ_P0034247 Sectm1b protein_coding protein_coding MGP_129S1SvImJ_T0034248.1 MGP_129S1SvImJ_G0019536.1 mouse_genomes_project 11 125585047 125594079 - MGP_129S1SvImJ_P0034248 Sectm1b protein_coding protein_coding MGP_129S1SvImJ_T0034249.1 MGP_129S1SvImJ_G0019536.1 mouse_genomes_project 11 125585502 125593927 - Sectm1b protein_coding retained_intron MGP_129S1SvImJ_T0034250.1 MGP_129S1SvImJ_G0019536.1 mouse_genomes_project 11 125586324 125586719 - Sectm1b protein_coding processed_transcript MGP_129S1SvImJ_T0032844.1 MGP_129S1SvImJ_G0019250.1 mouse_genomes_project 11 105935646 105956627 - MGP_129S1SvImJ_P0032844 Kif18b protein_coding protein_coding MGP_129S1SvImJ_T0032845.1 MGP_129S1SvImJ_G0019250.1 mouse_genomes_project 11 105946628 105956591 - Kif18b protein_coding processed_transcript MGP_129S1SvImJ_T0029349.1 MGP_129S1SvImJ_G0018397.1 mouse_genomes_project 11 59239781 59286511 - MGP_129S1SvImJ_P0029349 Snap47 protein_coding protein_coding MGP_129S1SvImJ_T0029350.1 MGP_129S1SvImJ_G0018397.1 mouse_genomes_project 11 59239791 59286519 - MGP_129S1SvImJ_P0029350 Snap47 protein_coding protein_coding MGP_129S1SvImJ_T0029351.1 MGP_129S1SvImJ_G0018397.1 mouse_genomes_project 11 59261386 59286511 - MGP_129S1SvImJ_P0029351 Snap47 protein_coding protein_coding MGP_129S1SvImJ_T0029352.1 MGP_129S1SvImJ_G0018397.1 mouse_genomes_project 11 59261392 59286425 - MGP_129S1SvImJ_P0029352 Snap47 protein_coding protein_coding MGP_129S1SvImJ_T0029353.1 MGP_129S1SvImJ_G0018397.1 mouse_genomes_project 11 59273143 59286511 - MGP_129S1SvImJ_P0029353 Snap47 protein_coding protein_coding MGP_129S1SvImJ_T0029354.1 MGP_129S1SvImJ_G0018397.1 mouse_genomes_project 11 59273365 59284061 - MGP_129S1SvImJ_P0029354 Snap47 protein_coding protein_coding MGP_129S1SvImJ_T0029355.1 MGP_129S1SvImJ_G0018397.1 mouse_genomes_project 11 59273397 59286428 - MGP_129S1SvImJ_P0029355 Snap47 protein_coding protein_coding MGP_129S1SvImJ_T0029356.1 MGP_129S1SvImJ_G0018397.1 mouse_genomes_project 11 59273558 59287698 - MGP_129S1SvImJ_P0029356 Snap47 protein_coding protein_coding MGP_129S1SvImJ_T0028719.1 MGP_129S1SvImJ_G0018203.1 mouse_genomes_project 11 46540684 46541297 + MGP_129S1SvImJ_P0028719 protein_coding protein_coding MGP_129S1SvImJ_T0003375.1 MGP_129S1SvImJ_G0003110.1 mouse_genomes_project 11 122426686 122430111 + Gm11738 antisense antisense MGP_129S1SvImJ_T0034257.1 MGP_129S1SvImJ_G0019539.1 mouse_genomes_project 11 125680199 125682376 + MGP_129S1SvImJ_P0034257 Tex19.1 protein_coding protein_coding MGP_129S1SvImJ_T0034258.1 MGP_129S1SvImJ_G0019539.1 mouse_genomes_project 11 125680213 125680924 + MGP_129S1SvImJ_P0034258 Tex19.1 protein_coding protein_coding MGP_129S1SvImJ_T0028690.1 MGP_129S1SvImJ_G0018193.1 mouse_genomes_project 11 45315094 45326959 + Fam71b protein_coding processed_transcript MGP_129S1SvImJ_T0028691.1 MGP_129S1SvImJ_G0018193.1 mouse_genomes_project 11 45325035 45328305 + MGP_129S1SvImJ_P0028691 Fam71b protein_coding protein_coding MGP_129S1SvImJ_T0017277.1 MGP_129S1SvImJ_G0015200.1 mouse_genomes_project 11 99398299 99404030 - Gm11532 processed_transcript processed_transcript MGP_129S1SvImJ_T0003257.1 MGP_129S1SvImJ_G0003018.1 mouse_genomes_project 11 81305631 81324311 - Adap2os antisense antisense MGP_129S1SvImJ_T0006332.1 MGP_129S1SvImJ_G0005284.1 mouse_genomes_project 11 91943730 91952431 - Gm11494 lincRNA lincRNA MGP_129S1SvImJ_T0098447.1 MGP_129S1SvImJ_G0036532.1 mouse_genomes_project 11 24971758 24971840 + n-R5s68 rRNA rRNA MGP_129S1SvImJ_T0017296.1 MGP_129S1SvImJ_G0015217.1 mouse_genomes_project 11 111216584 111220352 + processed_transcript processed_transcript MGP_129S1SvImJ_T0029430.1 MGP_129S1SvImJ_G0018414.1 mouse_genomes_project 11 60095490 60227389 - MGP_129S1SvImJ_P0029430 Tom1l2 protein_coding protein_coding MGP_129S1SvImJ_T0029431.1 MGP_129S1SvImJ_G0018414.1 mouse_genomes_project 11 60095491 60107951 - Tom1l2 protein_coding processed_transcript MGP_129S1SvImJ_T0029432.1 MGP_129S1SvImJ_G0018414.1 mouse_genomes_project 11 60095491 60227389 - MGP_129S1SvImJ_P0029432 Tom1l2 protein_coding protein_coding MGP_129S1SvImJ_T0029433.1 MGP_129S1SvImJ_G0018414.1 mouse_genomes_project 11 60095491 60227389 - MGP_129S1SvImJ_P0029433 Tom1l2 protein_coding protein_coding MGP_129S1SvImJ_T0029434.1 MGP_129S1SvImJ_G0018414.1 mouse_genomes_project 11 60095491 60227389 - MGP_129S1SvImJ_P0029434 Tom1l2 protein_coding protein_coding MGP_129S1SvImJ_T0029435.1 MGP_129S1SvImJ_G0018414.1 mouse_genomes_project 11 60098376 60100121 - Tom1l2 protein_coding processed_transcript MGP_129S1SvImJ_T0029436.1 MGP_129S1SvImJ_G0018414.1 mouse_genomes_project 11 60098675 60115295 - MGP_129S1SvImJ_P0029436 Tom1l2 protein_coding protein_coding MGP_129S1SvImJ_T0029437.1 MGP_129S1SvImJ_G0018414.1 mouse_genomes_project 11 60098675 60115807 - MGP_129S1SvImJ_P0029437 Tom1l2 protein_coding protein_coding MGP_129S1SvImJ_T0029438.1 MGP_129S1SvImJ_G0018414.1 mouse_genomes_project 11 60110712 60227389 - MGP_129S1SvImJ_P0029438 Tom1l2 protein_coding protein_coding MGP_129S1SvImJ_T0029439.1 MGP_129S1SvImJ_G0018414.1 mouse_genomes_project 11 60111079 60227389 - MGP_129S1SvImJ_P0029439 Tom1l2 protein_coding protein_coding MGP_129S1SvImJ_T0029440.1 MGP_129S1SvImJ_G0018414.1 mouse_genomes_project 11 60122939 60227389 - Tom1l2 protein_coding processed_transcript MGP_129S1SvImJ_T0006357.1 MGP_129S1SvImJ_G0005300.1 mouse_genomes_project 11 105894446 106121238 + Gm26668 lincRNA lincRNA MGP_129S1SvImJ_T0033878.1 MGP_129S1SvImJ_G0019467.1 mouse_genomes_project 11 122729797 122742731 - MGP_129S1SvImJ_P0033878 Cant1 protein_coding protein_coding MGP_129S1SvImJ_T0033879.1 MGP_129S1SvImJ_G0019467.1 mouse_genomes_project 11 122729797 122742697 - MGP_129S1SvImJ_P0033879 Cant1 protein_coding protein_coding MGP_129S1SvImJ_T0033880.1 MGP_129S1SvImJ_G0019467.1 mouse_genomes_project 11 122729798 122742668 - MGP_129S1SvImJ_P0033880 Cant1 protein_coding protein_coding MGP_129S1SvImJ_T0033881.1 MGP_129S1SvImJ_G0019467.1 mouse_genomes_project 11 122731152 122742697 - MGP_129S1SvImJ_P0033881 Cant1 protein_coding protein_coding MGP_129S1SvImJ_T0033882.1 MGP_129S1SvImJ_G0019467.1 mouse_genomes_project 11 122731152 122739310 - MGP_129S1SvImJ_P0033882 Cant1 protein_coding protein_coding MGP_129S1SvImJ_T0033883.1 MGP_129S1SvImJ_G0019467.1 mouse_genomes_project 11 122731152 122742668 - MGP_129S1SvImJ_P0033883 Cant1 protein_coding protein_coding MGP_129S1SvImJ_T0012696.1 MGP_129S1SvImJ_G0010785.1 mouse_genomes_project 11 79130865 79131108 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031605.1 MGP_129S1SvImJ_G0018927.1 mouse_genomes_project 11 90722779 90725069 - MGP_129S1SvImJ_P0031605 Gm15698 protein_coding protein_coding MGP_129S1SvImJ_T0012528.1 MGP_129S1SvImJ_G0010617.1 mouse_genomes_project 11 18413903 18414110 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033456.1 MGP_129S1SvImJ_G0019389.1 mouse_genomes_project 11 119501534 119517484 + MGP_129S1SvImJ_P0033456 Armc7 protein_coding protein_coding MGP_129S1SvImJ_T0033457.1 MGP_129S1SvImJ_G0019389.1 mouse_genomes_project 11 119501565 119510927 + Armc7 protein_coding processed_transcript MGP_129S1SvImJ_T0033458.1 MGP_129S1SvImJ_G0019389.1 mouse_genomes_project 11 119501609 119512436 + Armc7 protein_coding processed_transcript MGP_129S1SvImJ_T0033459.1 MGP_129S1SvImJ_G0019389.1 mouse_genomes_project 11 119501821 119516079 + Armc7 protein_coding processed_transcript MGP_129S1SvImJ_T0030314.1 MGP_129S1SvImJ_G0018604.1 mouse_genomes_project 11 71156975 71161287 - MGP_129S1SvImJ_P0030314 Chrne protein_coding protein_coding MGP_129S1SvImJ_T0030315.1 MGP_129S1SvImJ_G0018604.1 mouse_genomes_project 11 71156975 71161309 - MGP_129S1SvImJ_P0030315 Chrne protein_coding protein_coding MGP_129S1SvImJ_T0030316.1 MGP_129S1SvImJ_G0018604.1 mouse_genomes_project 11 71156977 71157766 - Chrne protein_coding retained_intron MGP_129S1SvImJ_T0030317.1 MGP_129S1SvImJ_G0018604.1 mouse_genomes_project 11 71156985 71157790 - Chrne protein_coding retained_intron MGP_129S1SvImJ_T0003391.1 MGP_129S1SvImJ_G0003122.1 mouse_genomes_project 11 125479489 125480410 + Gm28192 antisense antisense MGP_129S1SvImJ_T0028996.1 MGP_129S1SvImJ_G0018282.1 mouse_genomes_project 11 51537721 51550818 + MGP_129S1SvImJ_P0028996 Skp1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028997.1 MGP_129S1SvImJ_G0018282.1 mouse_genomes_project 11 51537735 51552599 + MGP_129S1SvImJ_P0028997 Skp1a protein_coding protein_coding MGP_129S1SvImJ_T0028998.1 MGP_129S1SvImJ_G0018282.1 mouse_genomes_project 11 51537763 51544148 + Skp1a protein_coding retained_intron MGP_129S1SvImJ_T0028999.1 MGP_129S1SvImJ_G0018282.1 mouse_genomes_project 11 51537763 51550821 + MGP_129S1SvImJ_P0028999 Skp1a protein_coding protein_coding MGP_129S1SvImJ_T0029000.1 MGP_129S1SvImJ_G0018282.1 mouse_genomes_project 11 51537915 51552599 + MGP_129S1SvImJ_P0029000 Skp1a protein_coding protein_coding MGP_129S1SvImJ_T0029001.1 MGP_129S1SvImJ_G0018282.1 mouse_genomes_project 11 51542587 51551776 + MGP_129S1SvImJ_P0029001 Skp1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033506.1 MGP_129S1SvImJ_G0019397.1 mouse_genomes_project 11 119657055 119672174 - MGP_129S1SvImJ_P0033506 Slc25a19 protein_coding protein_coding MGP_129S1SvImJ_T0033507.1 MGP_129S1SvImJ_G0019397.1 mouse_genomes_project 11 119658328 119666799 - MGP_129S1SvImJ_P0033507 Slc25a19 protein_coding protein_coding MGP_129S1SvImJ_T0033508.1 MGP_129S1SvImJ_G0019397.1 mouse_genomes_project 11 119659426 119660771 - Slc25a19 protein_coding processed_transcript MGP_129S1SvImJ_T0033509.1 MGP_129S1SvImJ_G0019397.1 mouse_genomes_project 11 119660527 119672095 - Slc25a19 protein_coding processed_transcript MGP_129S1SvImJ_T0033510.1 MGP_129S1SvImJ_G0019397.1 mouse_genomes_project 11 119666980 119672094 - Slc25a19 protein_coding processed_transcript MGP_129S1SvImJ_T0033511.1 MGP_129S1SvImJ_G0019397.1 mouse_genomes_project 11 119667385 119672100 - Slc25a19 protein_coding processed_transcript MGP_129S1SvImJ_T0033512.1 MGP_129S1SvImJ_G0019397.1 mouse_genomes_project 11 119667850 119672269 - Slc25a19 protein_coding processed_transcript MGP_129S1SvImJ_T0033513.1 MGP_129S1SvImJ_G0019397.1 mouse_genomes_project 11 119668172 119672100 - MGP_129S1SvImJ_P0033513 Slc25a19 protein_coding protein_coding MGP_129S1SvImJ_T0033514.1 MGP_129S1SvImJ_G0019397.1 mouse_genomes_project 11 119668193 119671948 - MGP_129S1SvImJ_P0033514 Slc25a19 protein_coding protein_coding MGP_129S1SvImJ_T0033515.1 MGP_129S1SvImJ_G0019397.1 mouse_genomes_project 11 119668248 119672118 - MGP_129S1SvImJ_P0033515 Slc25a19 protein_coding protein_coding MGP_129S1SvImJ_T0098299.1 MGP_129S1SvImJ_G0036384.1 mouse_genomes_project 11 59022015 59022493 - pseudogene pseudogene MGP_129S1SvImJ_T0006341.1 MGP_129S1SvImJ_G0005290.1 mouse_genomes_project 11 98100383 98101396 - Gm11527 lincRNA lincRNA MGP_129S1SvImJ_T0012750.1 MGP_129S1SvImJ_G0010839.1 mouse_genomes_project 11 102551821 102552109 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003264.1 MGP_129S1SvImJ_G0003024.1 mouse_genomes_project 11 84231357 84249826 - Slfn5os antisense antisense MGP_129S1SvImJ_T0030587.1 MGP_129S1SvImJ_G0018671.1 mouse_genomes_project 11 74377495 74402282 + MGP_129S1SvImJ_P0030587 Zfp735 protein_coding protein_coding MGP_129S1SvImJ_T0030588.1 MGP_129S1SvImJ_G0018671.1 mouse_genomes_project 11 74377516 74399315 + Zfp735 protein_coding processed_transcript MGP_129S1SvImJ_T0030589.1 MGP_129S1SvImJ_G0018671.1 mouse_genomes_project 11 74386300 74399247 + Zfp735 protein_coding processed_transcript MGP_129S1SvImJ_T0028361.1 MGP_129S1SvImJ_G0018108.1 mouse_genomes_project 11 27535026 27542011 + MGP_129S1SvImJ_P0028361 Mtif2 protein_coding protein_coding MGP_129S1SvImJ_T0028362.1 MGP_129S1SvImJ_G0018108.1 mouse_genomes_project 11 27535054 27542530 + MGP_129S1SvImJ_P0028362 Mtif2 protein_coding protein_coding MGP_129S1SvImJ_T0028363.1 MGP_129S1SvImJ_G0018108.1 mouse_genomes_project 11 27535065 27538841 + Mtif2 protein_coding processed_transcript MGP_129S1SvImJ_T0028364.1 MGP_129S1SvImJ_G0018108.1 mouse_genomes_project 11 27535066 27561153 + MGP_129S1SvImJ_P0028364 Mtif2 protein_coding protein_coding MGP_129S1SvImJ_T0028365.1 MGP_129S1SvImJ_G0018108.1 mouse_genomes_project 11 27535068 27548779 + MGP_129S1SvImJ_P0028365 Mtif2 protein_coding protein_coding MGP_129S1SvImJ_T0028366.1 MGP_129S1SvImJ_G0018108.1 mouse_genomes_project 11 27535075 27560043 + MGP_129S1SvImJ_P0028366 Mtif2 protein_coding protein_coding MGP_129S1SvImJ_T0028367.1 MGP_129S1SvImJ_G0018108.1 mouse_genomes_project 11 27541903 27548886 + MGP_129S1SvImJ_P0028367 Mtif2 protein_coding protein_coding MGP_129S1SvImJ_T0028368.1 MGP_129S1SvImJ_G0018108.1 mouse_genomes_project 11 27548584 27550635 + Mtif2 protein_coding processed_transcript MGP_129S1SvImJ_T0027966.1 MGP_129S1SvImJ_G0018016.1 mouse_genomes_project 11 3293353 3294968 + MGP_129S1SvImJ_P0027966 A730071L15Rik protein_coding protein_coding MGP_129S1SvImJ_T0029081.1 MGP_129S1SvImJ_G0018305.1 mouse_genomes_project 11 53190713 53191620 - MGP_129S1SvImJ_P0029081 Gm17334 protein_coding protein_coding MGP_129S1SvImJ_T0030723.1 MGP_129S1SvImJ_G0018715.1 mouse_genomes_project 11 76263269 76266344 + MGP_129S1SvImJ_P0030723 Rilp protein_coding protein_coding MGP_129S1SvImJ_T0030724.1 MGP_129S1SvImJ_G0018715.1 mouse_genomes_project 11 76263642 76266339 + Rilp protein_coding retained_intron MGP_129S1SvImJ_T0030568.1 MGP_129S1SvImJ_G0018660.1 mouse_genomes_project 11 73987814 74013089 - MGP_129S1SvImJ_P0030568 Aspa protein_coding protein_coding MGP_129S1SvImJ_T0030569.1 MGP_129S1SvImJ_G0018660.1 mouse_genomes_project 11 73987814 74018004 - MGP_129S1SvImJ_P0030569 Aspa protein_coding protein_coding MGP_129S1SvImJ_T0030570.1 MGP_129S1SvImJ_G0018660.1 mouse_genomes_project 11 73996317 74014914 - MGP_129S1SvImJ_P0030570 Aspa protein_coding protein_coding MGP_129S1SvImJ_T0030571.1 MGP_129S1SvImJ_G0018660.1 mouse_genomes_project 11 74004469 74012792 - Aspa protein_coding retained_intron MGP_129S1SvImJ_T0030572.1 MGP_129S1SvImJ_G0018660.1 mouse_genomes_project 11 74008301 74015244 - MGP_129S1SvImJ_P0030572 Aspa protein_coding protein_coding MGP_129S1SvImJ_T0030573.1 MGP_129S1SvImJ_G0018660.1 mouse_genomes_project 11 74010686 74013069 - MGP_129S1SvImJ_P0030573 Aspa protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033569.1 MGP_129S1SvImJ_G0019406.1 mouse_genomes_project 11 119988564 119990467 + MGP_129S1SvImJ_P0033569 Smim6 protein_coding protein_coding MGP_129S1SvImJ_T0003131.1 MGP_129S1SvImJ_G0002914.1 mouse_genomes_project 11 1588596 1596439 - Gm11961 antisense antisense MGP_129S1SvImJ_T0003132.1 MGP_129S1SvImJ_G0002914.1 mouse_genomes_project 11 1594048 1598684 - Gm11961 antisense antisense MGP_129S1SvImJ_T0028535.1 MGP_129S1SvImJ_G0018152.1 mouse_genomes_project 11 32649116 32765329 + MGP_129S1SvImJ_P0028535 Fam196b protein_coding protein_coding MGP_129S1SvImJ_T0028536.1 MGP_129S1SvImJ_G0018152.1 mouse_genomes_project 11 32649116 32765328 + MGP_129S1SvImJ_P0028536 Fam196b protein_coding protein_coding MGP_129S1SvImJ_T0011316.1 MGP_129S1SvImJ_G0009432.1 mouse_genomes_project 11 18791844 18792113 - Gm22600 misc_RNA misc_RNA MGP_129S1SvImJ_T0033423.1 MGP_129S1SvImJ_G0019384.1 mouse_genomes_project 11 119424098 119433021 + MGP_129S1SvImJ_P0033423 Ict1 protein_coding protein_coding MGP_129S1SvImJ_T0033424.1 MGP_129S1SvImJ_G0019384.1 mouse_genomes_project 11 119424100 119433009 + MGP_129S1SvImJ_P0033424 Ict1 protein_coding protein_coding MGP_129S1SvImJ_T0033425.1 MGP_129S1SvImJ_G0019384.1 mouse_genomes_project 11 119424103 119431266 + MGP_129S1SvImJ_P0033425 Ict1 protein_coding protein_coding MGP_129S1SvImJ_T0033426.1 MGP_129S1SvImJ_G0019384.1 mouse_genomes_project 11 119424113 119430400 + Ict1 protein_coding retained_intron MGP_129S1SvImJ_T0033427.1 MGP_129S1SvImJ_G0019384.1 mouse_genomes_project 11 119424117 119430608 + MGP_129S1SvImJ_P0033427 Ict1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033428.1 MGP_129S1SvImJ_G0019384.1 mouse_genomes_project 11 119424123 119431106 + Ict1 protein_coding processed_transcript MGP_129S1SvImJ_T0033429.1 MGP_129S1SvImJ_G0019384.1 mouse_genomes_project 11 119424128 119430598 + Ict1 protein_coding retained_intron MGP_129S1SvImJ_T0033430.1 MGP_129S1SvImJ_G0019384.1 mouse_genomes_project 11 119424168 119431071 + Ict1 protein_coding processed_transcript MGP_129S1SvImJ_T0033431.1 MGP_129S1SvImJ_G0019384.1 mouse_genomes_project 11 119430207 119431066 + Ict1 protein_coding retained_intron MGP_129S1SvImJ_T0033432.1 MGP_129S1SvImJ_G0019384.1 mouse_genomes_project 11 119430506 119431255 + Ict1 protein_coding retained_intron MGP_129S1SvImJ_T0003244.1 MGP_129S1SvImJ_G0003006.1 mouse_genomes_project 11 71153049 71155049 - Gm12316 antisense antisense MGP_129S1SvImJ_T0031297.1 MGP_129S1SvImJ_G0018854.1 mouse_genomes_project 11 84933108 84938344 - MGP_129S1SvImJ_P0031297 Ccl6 protein_coding protein_coding MGP_129S1SvImJ_T0031298.1 MGP_129S1SvImJ_G0018854.1 mouse_genomes_project 11 84933621 84935121 - Ccl6 protein_coding retained_intron MGP_129S1SvImJ_T0031299.1 MGP_129S1SvImJ_G0018854.1 mouse_genomes_project 11 84934698 84938232 - Ccl6 protein_coding retained_intron MGP_129S1SvImJ_T0012604.1 MGP_129S1SvImJ_G0010693.1 mouse_genomes_project 11 48507916 48508828 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099226.1 MGP_129S1SvImJ_G0037293.1 mouse_genomes_project 11 17690160 17690263 - Gm26253 snRNA snRNA MGP_129S1SvImJ_T0031267.1 MGP_129S1SvImJ_G0018845.1 mouse_genomes_project 11 84618639 84653650 + MGP_129S1SvImJ_P0031267 Ap2b1 protein_coding protein_coding MGP_129S1SvImJ_T0031268.1 MGP_129S1SvImJ_G0018845.1 mouse_genomes_project 11 84622095 84726242 + MGP_129S1SvImJ_P0031268 Ap2b1 protein_coding protein_coding MGP_129S1SvImJ_T0031269.1 MGP_129S1SvImJ_G0018845.1 mouse_genomes_project 11 84622315 84665413 + Ap2b1 protein_coding retained_intron MGP_129S1SvImJ_T0031270.1 MGP_129S1SvImJ_G0018845.1 mouse_genomes_project 11 84622346 84719813 + MGP_129S1SvImJ_P0031270 Ap2b1 protein_coding protein_coding MGP_129S1SvImJ_T0031271.1 MGP_129S1SvImJ_G0018845.1 mouse_genomes_project 11 84622386 84724218 + MGP_129S1SvImJ_P0031271 Ap2b1 protein_coding protein_coding MGP_129S1SvImJ_T0031272.1 MGP_129S1SvImJ_G0018845.1 mouse_genomes_project 11 84622558 84637147 + MGP_129S1SvImJ_P0031272 Ap2b1 protein_coding protein_coding MGP_129S1SvImJ_T0031273.1 MGP_129S1SvImJ_G0018845.1 mouse_genomes_project 11 84627855 84723850 + MGP_129S1SvImJ_P0031273 Ap2b1 protein_coding protein_coding MGP_129S1SvImJ_T0100528.1 MGP_129S1SvImJ_G0038595.1 mouse_genomes_project 11 92633884 92634021 - Gm22762 snoRNA snoRNA MGP_129S1SvImJ_T0000873.1 MGP_129S1SvImJ_G0000806.1 mouse_genomes_project 11 44155164 44176413 - TEC TEC MGP_129S1SvImJ_T0033784.1 MGP_129S1SvImJ_G0019445.1 mouse_genomes_project 11 121315204 121353240 + Sec14l1 protein_coding retained_intron MGP_129S1SvImJ_T0033785.1 MGP_129S1SvImJ_G0019445.1 mouse_genomes_project 11 121315208 121362126 + MGP_129S1SvImJ_P0033785 Sec14l1 protein_coding protein_coding MGP_129S1SvImJ_T0033786.1 MGP_129S1SvImJ_G0019445.1 mouse_genomes_project 11 121315274 121360420 + MGP_129S1SvImJ_P0033786 Sec14l1 protein_coding protein_coding MGP_129S1SvImJ_T0033787.1 MGP_129S1SvImJ_G0019445.1 mouse_genomes_project 11 121315274 121362129 + MGP_129S1SvImJ_P0033787 Sec14l1 protein_coding protein_coding MGP_129S1SvImJ_T0033788.1 MGP_129S1SvImJ_G0019445.1 mouse_genomes_project 11 121315288 121328813 + Sec14l1 protein_coding processed_transcript MGP_129S1SvImJ_T0033789.1 MGP_129S1SvImJ_G0019445.1 mouse_genomes_project 11 121357932 121359341 + Sec14l1 protein_coding retained_intron MGP_129S1SvImJ_T0012514.1 MGP_129S1SvImJ_G0010603.1 mouse_genomes_project 11 15635740 15636272 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033372.1 MGP_129S1SvImJ_G0019370.1 mouse_genomes_project 11 119045389 119055626 - MGP_129S1SvImJ_P0033372 Cd300e protein_coding protein_coding MGP_129S1SvImJ_T0003213.1 MGP_129S1SvImJ_G0002982.1 mouse_genomes_project 11 62597257 62598252 - Gm12279 antisense antisense MGP_129S1SvImJ_T0029020.1 MGP_129S1SvImJ_G0018289.1 mouse_genomes_project 11 52729631 52803230 + MGP_129S1SvImJ_P0029020 Aff4 protein_coding protein_coding MGP_129S1SvImJ_T0029021.1 MGP_129S1SvImJ_G0018289.1 mouse_genomes_project 11 52746932 52752123 + MGP_129S1SvImJ_P0029021 Aff4 protein_coding protein_coding MGP_129S1SvImJ_T0029022.1 MGP_129S1SvImJ_G0018289.1 mouse_genomes_project 11 52747489 52755541 + Aff4 protein_coding retained_intron MGP_129S1SvImJ_T0029023.1 MGP_129S1SvImJ_G0018289.1 mouse_genomes_project 11 52752182 52755313 + Aff4 protein_coding retained_intron MGP_129S1SvImJ_T0029024.1 MGP_129S1SvImJ_G0018289.1 mouse_genomes_project 11 52752568 52778761 + MGP_129S1SvImJ_P0029024 Aff4 protein_coding protein_coding MGP_129S1SvImJ_T0029025.1 MGP_129S1SvImJ_G0018289.1 mouse_genomes_project 11 52752576 52780902 + Aff4 protein_coding processed_transcript MGP_129S1SvImJ_T0029026.1 MGP_129S1SvImJ_G0018289.1 mouse_genomes_project 11 52785823 52790942 + Aff4 protein_coding retained_intron MGP_129S1SvImJ_T0029027.1 MGP_129S1SvImJ_G0018289.1 mouse_genomes_project 11 52792093 52797233 + Aff4 protein_coding retained_intron MGP_129S1SvImJ_T0028921.1 MGP_129S1SvImJ_G0018266.1 mouse_genomes_project 11 50483074 50494971 + MGP_129S1SvImJ_P0028921 Clk4 protein_coding protein_coding MGP_129S1SvImJ_T0028922.1 MGP_129S1SvImJ_G0018266.1 mouse_genomes_project 11 50483074 50493364 + MGP_129S1SvImJ_P0028922 Clk4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028923.1 MGP_129S1SvImJ_G0018266.1 mouse_genomes_project 11 50484458 50503317 + MGP_129S1SvImJ_P0028923 Clk4 protein_coding protein_coding MGP_129S1SvImJ_T0028924.1 MGP_129S1SvImJ_G0018266.1 mouse_genomes_project 11 50484494 50496604 + MGP_129S1SvImJ_P0028924 Clk4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028925.1 MGP_129S1SvImJ_G0018266.1 mouse_genomes_project 11 50484506 50488849 + Clk4 protein_coding retained_intron MGP_129S1SvImJ_T0028926.1 MGP_129S1SvImJ_G0018266.1 mouse_genomes_project 11 50484508 50493709 + Clk4 protein_coding retained_intron MGP_129S1SvImJ_T0028927.1 MGP_129S1SvImJ_G0018266.1 mouse_genomes_project 11 50484513 50494967 + MGP_129S1SvImJ_P0028927 Clk4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028928.1 MGP_129S1SvImJ_G0018266.1 mouse_genomes_project 11 50484518 50493405 + Clk4 protein_coding retained_intron MGP_129S1SvImJ_T0028929.1 MGP_129S1SvImJ_G0018266.1 mouse_genomes_project 11 50484530 50503319 + MGP_129S1SvImJ_P0028929 Clk4 protein_coding protein_coding MGP_129S1SvImJ_T0028930.1 MGP_129S1SvImJ_G0018266.1 mouse_genomes_project 11 50493343 50498554 + Clk4 protein_coding retained_intron MGP_129S1SvImJ_T0028931.1 MGP_129S1SvImJ_G0018266.1 mouse_genomes_project 11 50494795 50503317 + MGP_129S1SvImJ_P0028931 Clk4 protein_coding protein_coding MGP_129S1SvImJ_T0028932.1 MGP_129S1SvImJ_G0018266.1 mouse_genomes_project 11 50494956 50497582 + Clk4 protein_coding retained_intron MGP_129S1SvImJ_T0028933.1 MGP_129S1SvImJ_G0018266.1 mouse_genomes_project 11 50496252 50496857 + Clk4 protein_coding retained_intron MGP_129S1SvImJ_T0028934.1 MGP_129S1SvImJ_G0018266.1 mouse_genomes_project 11 50501661 50502753 + Clk4 protein_coding retained_intron MGP_129S1SvImJ_T0027915.1 MGP_129S1SvImJ_G0018004.1 mouse_genomes_project 11 2772473 2776153 - MGP_129S1SvImJ_P0027915 Mrps24 protein_coding protein_coding MGP_129S1SvImJ_T0027916.1 MGP_129S1SvImJ_G0018004.1 mouse_genomes_project 11 2772746 2776133 - Mrps24 protein_coding retained_intron MGP_129S1SvImJ_T0027917.1 MGP_129S1SvImJ_G0018004.1 mouse_genomes_project 11 2772943 2785482 - Mrps24 protein_coding processed_transcript MGP_129S1SvImJ_T0027918.1 MGP_129S1SvImJ_G0018004.1 mouse_genomes_project 11 2772975 2776156 - Mrps24 protein_coding retained_intron MGP_129S1SvImJ_T0027919.1 MGP_129S1SvImJ_G0018004.1 mouse_genomes_project 11 2773080 2776108 - Mrps24 protein_coding retained_intron MGP_129S1SvImJ_T0032195.1 MGP_129S1SvImJ_G0019073.1 mouse_genomes_project 11 101399657 101413599 + MGP_129S1SvImJ_P0032195 Msl1 protein_coding protein_coding MGP_129S1SvImJ_T0032196.1 MGP_129S1SvImJ_G0019073.1 mouse_genomes_project 11 101401522 101406783 + MGP_129S1SvImJ_P0032196 Msl1 protein_coding protein_coding MGP_129S1SvImJ_T0032197.1 MGP_129S1SvImJ_G0019073.1 mouse_genomes_project 11 101401531 101412168 + MGP_129S1SvImJ_P0032197 Msl1 protein_coding protein_coding MGP_129S1SvImJ_T0032198.1 MGP_129S1SvImJ_G0019073.1 mouse_genomes_project 11 101404384 101411341 + MGP_129S1SvImJ_P0032198 Msl1 protein_coding protein_coding MGP_129S1SvImJ_T0032199.1 MGP_129S1SvImJ_G0019073.1 mouse_genomes_project 11 101405895 101409853 + MGP_129S1SvImJ_P0032199 Msl1 protein_coding protein_coding MGP_129S1SvImJ_T0032200.1 MGP_129S1SvImJ_G0019073.1 mouse_genomes_project 11 101410004 101411513 + Msl1 protein_coding processed_transcript MGP_129S1SvImJ_T0099252.1 MGP_129S1SvImJ_G0037319.1 mouse_genomes_project 11 71574040 71574146 - Gm22297 snRNA snRNA MGP_129S1SvImJ_T0099253.1 MGP_129S1SvImJ_G0037320.1 mouse_genomes_project 11 72621844 72621947 + Gm23226 snRNA snRNA MGP_129S1SvImJ_T0031563.1 MGP_129S1SvImJ_G0018917.1 mouse_genomes_project 11 89561414 89562498 - MGP_129S1SvImJ_P0031563 Olfr464 protein_coding protein_coding MGP_129S1SvImJ_T0031564.1 MGP_129S1SvImJ_G0018917.1 mouse_genomes_project 11 89562059 89563998 - MGP_129S1SvImJ_P0031564 Olfr464 protein_coding protein_coding MGP_129S1SvImJ_T0031157.1 MGP_129S1SvImJ_G0018811.1 mouse_genomes_project 11 81520199 81539696 - MGP_129S1SvImJ_P0031157 5730455P16Rik protein_coding protein_coding MGP_129S1SvImJ_T0031158.1 MGP_129S1SvImJ_G0018811.1 mouse_genomes_project 11 81520200 81539715 - MGP_129S1SvImJ_P0031158 5730455P16Rik protein_coding protein_coding MGP_129S1SvImJ_T0031159.1 MGP_129S1SvImJ_G0018811.1 mouse_genomes_project 11 81532116 81539715 - MGP_129S1SvImJ_P0031159 5730455P16Rik protein_coding protein_coding MGP_129S1SvImJ_T0030599.1 MGP_129S1SvImJ_G0018678.1 mouse_genomes_project 11 74596194 74597133 - MGP_129S1SvImJ_P0030599 Olfr395 protein_coding protein_coding MGP_129S1SvImJ_T0006251.1 MGP_129S1SvImJ_G0005223.1 mouse_genomes_project 11 49405619 49462540 + Gm26542 lincRNA lincRNA MGP_129S1SvImJ_T0032777.1 MGP_129S1SvImJ_G0019236.1 mouse_genomes_project 11 105413698 105424377 - MGP_129S1SvImJ_P0032777 Fam171a2 protein_coding protein_coding MGP_129S1SvImJ_T0032778.1 MGP_129S1SvImJ_G0019236.1 mouse_genomes_project 11 105415465 105416503 - Fam171a2 protein_coding processed_transcript MGP_129S1SvImJ_T0032779.1 MGP_129S1SvImJ_G0019236.1 mouse_genomes_project 11 105416958 105424289 - Fam171a2 protein_coding processed_transcript MGP_129S1SvImJ_T0003339.1 MGP_129S1SvImJ_G0003083.1 mouse_genomes_project 11 110389006 110391327 + antisense antisense MGP_129S1SvImJ_T0003340.1 MGP_129S1SvImJ_G0003083.1 mouse_genomes_project 11 110389111 110391332 + antisense antisense MGP_129S1SvImJ_T0099230.1 MGP_129S1SvImJ_G0037297.1 mouse_genomes_project 11 22357804 22357877 - Gm22787 snRNA snRNA MGP_129S1SvImJ_T0029189.1 MGP_129S1SvImJ_G0018329.1 mouse_genomes_project 11 54760395 54828686 - MGP_129S1SvImJ_P0029189 Fat2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0006268.1 MGP_129S1SvImJ_G0005238.1 mouse_genomes_project 11 61946132 61947954 + Gm12273 lincRNA lincRNA MGP_129S1SvImJ_T0034011.1 MGP_129S1SvImJ_G0019491.1 mouse_genomes_project 11 124533696 124535474 + MGP_129S1SvImJ_P0034011 1810043H04Rik protein_coding protein_coding MGP_129S1SvImJ_T0034012.1 MGP_129S1SvImJ_G0019491.1 mouse_genomes_project 11 124533712 124535132 + MGP_129S1SvImJ_P0034012 1810043H04Rik protein_coding protein_coding MGP_129S1SvImJ_T0034013.1 MGP_129S1SvImJ_G0019491.1 mouse_genomes_project 11 124533867 124535183 + 1810043H04Rik protein_coding retained_intron MGP_129S1SvImJ_T0029845.1 MGP_129S1SvImJ_G0018505.1 mouse_genomes_project 11 69194756 69233121 - MGP_129S1SvImJ_P0029845 Ndel1 protein_coding protein_coding MGP_129S1SvImJ_T0029846.1 MGP_129S1SvImJ_G0018505.1 mouse_genomes_project 11 69195431 69219609 - Ndel1 protein_coding processed_transcript MGP_129S1SvImJ_T0029847.1 MGP_129S1SvImJ_G0018505.1 mouse_genomes_project 11 69205991 69253067 - MGP_129S1SvImJ_P0029847 Ndel1 protein_coding protein_coding MGP_129S1SvImJ_T0029848.1 MGP_129S1SvImJ_G0018505.1 mouse_genomes_project 11 69206003 69233027 - MGP_129S1SvImJ_P0029848 Ndel1 protein_coding protein_coding MGP_129S1SvImJ_T0029849.1 MGP_129S1SvImJ_G0018505.1 mouse_genomes_project 11 69212921 69240036 - Ndel1 protein_coding processed_transcript MGP_129S1SvImJ_T0029850.1 MGP_129S1SvImJ_G0018505.1 mouse_genomes_project 11 69219602 69245036 - Ndel1 protein_coding processed_transcript MGP_129S1SvImJ_T0012631.1 MGP_129S1SvImJ_G0010720.1 mouse_genomes_project 11 57047945 57049842 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009770.1 MGP_129S1SvImJ_G0007886.1 mouse_genomes_project 11 110119525 110119592 - Mir3064 miRNA miRNA MGP_129S1SvImJ_T0102139.1 MGP_129S1SvImJ_G0039974.1 mouse_genomes_project 11 74234346 74235281 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0012635.1 MGP_129S1SvImJ_G0010724.1 mouse_genomes_project 11 57768561 57769229 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012563.1 MGP_129S1SvImJ_G0010652.1 mouse_genomes_project 11 28657377 28658094 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028510.1 MGP_129S1SvImJ_G0018144.1 mouse_genomes_project 11 31569561 31570541 - Gm12117 protein_coding translated_processed_pseudogene MGP_129S1SvImJ_T0028511.1 MGP_129S1SvImJ_G0018144.1 mouse_genomes_project 11 31569682 31570138 - MGP_129S1SvImJ_P0028511 Gm12117 protein_coding protein_coding MGP_129S1SvImJ_T0028258.1 MGP_129S1SvImJ_G0018086.1 mouse_genomes_project 11 21048699 21249579 + MGP_129S1SvImJ_P0028258 protein_coding protein_coding MGP_129S1SvImJ_T0028259.1 MGP_129S1SvImJ_G0018086.1 mouse_genomes_project 11 21048720 21248763 + MGP_129S1SvImJ_P0028259 protein_coding protein_coding MGP_129S1SvImJ_T0028260.1 MGP_129S1SvImJ_G0018086.1 mouse_genomes_project 11 21167055 21173927 + protein_coding processed_transcript MGP_129S1SvImJ_T0028261.1 MGP_129S1SvImJ_G0018086.1 mouse_genomes_project 11 21173329 21211017 + MGP_129S1SvImJ_P0028261 protein_coding protein_coding MGP_129S1SvImJ_T0028262.1 MGP_129S1SvImJ_G0018086.1 mouse_genomes_project 11 21212268 21215207 + protein_coding processed_transcript MGP_129S1SvImJ_T0028263.1 MGP_129S1SvImJ_G0018086.1 mouse_genomes_project 11 21212407 21214941 + protein_coding processed_transcript MGP_129S1SvImJ_T0028264.1 MGP_129S1SvImJ_G0018086.1 mouse_genomes_project 11 21225786 21247387 + MGP_129S1SvImJ_P0028264 protein_coding protein_coding MGP_129S1SvImJ_T0028265.1 MGP_129S1SvImJ_G0018086.1 mouse_genomes_project 11 21245823 21246342 + protein_coding processed_transcript MGP_129S1SvImJ_T0031459.1 MGP_129S1SvImJ_G0018892.1 mouse_genomes_project 11 88154239 88258056 - MGP_129S1SvImJ_P0031459 Vmp1 protein_coding protein_coding MGP_129S1SvImJ_T0031460.1 MGP_129S1SvImJ_G0018892.1 mouse_genomes_project 11 88155305 88172534 - Vmp1 protein_coding processed_transcript MGP_129S1SvImJ_T0031461.1 MGP_129S1SvImJ_G0018892.1 mouse_genomes_project 11 88155395 88157349 - Vmp1 protein_coding processed_transcript MGP_129S1SvImJ_T0031462.1 MGP_129S1SvImJ_G0018892.1 mouse_genomes_project 11 88155644 88157236 - Vmp1 protein_coding processed_transcript MGP_129S1SvImJ_T0031463.1 MGP_129S1SvImJ_G0018892.1 mouse_genomes_project 11 88155647 88172566 - Vmp1 protein_coding processed_transcript MGP_129S1SvImJ_T0031464.1 MGP_129S1SvImJ_G0018892.1 mouse_genomes_project 11 88216890 88237385 - Vmp1 protein_coding processed_transcript MGP_129S1SvImJ_T0031465.1 MGP_129S1SvImJ_G0018892.1 mouse_genomes_project 11 88238365 88258041 - Vmp1 protein_coding processed_transcript MGP_129S1SvImJ_T0031466.1 MGP_129S1SvImJ_G0018892.1 mouse_genomes_project 11 88238465 88244990 - MGP_129S1SvImJ_P0031466 Vmp1 protein_coding protein_coding MGP_129S1SvImJ_T0003338.1 MGP_129S1SvImJ_G0003082.1 mouse_genomes_project 11 110386623 110386850 + antisense antisense MGP_129S1SvImJ_T0029973.1 MGP_129S1SvImJ_G0018531.1 mouse_genomes_project 11 69822243 69824049 - MGP_129S1SvImJ_P0029973 protein_coding protein_coding MGP_129S1SvImJ_T0100536.1 MGP_129S1SvImJ_G0038603.1 mouse_genomes_project 11 105861068 105861205 + Gm22683 snoRNA snoRNA MGP_129S1SvImJ_T0031812.1 MGP_129S1SvImJ_G0018980.1 mouse_genomes_project 11 97465689 97501683 - MGP_129S1SvImJ_P0031812 Kat7 protein_coding protein_coding MGP_129S1SvImJ_T0031813.1 MGP_129S1SvImJ_G0018980.1 mouse_genomes_project 11 97465689 97501039 - MGP_129S1SvImJ_P0031813 Kat7 protein_coding protein_coding MGP_129S1SvImJ_T0031814.1 MGP_129S1SvImJ_G0018980.1 mouse_genomes_project 11 97465689 97501039 - MGP_129S1SvImJ_P0031814 Kat7 protein_coding protein_coding MGP_129S1SvImJ_T0031815.1 MGP_129S1SvImJ_G0018980.1 mouse_genomes_project 11 97465689 97501638 - MGP_129S1SvImJ_P0031815 Kat7 protein_coding protein_coding MGP_129S1SvImJ_T0031816.1 MGP_129S1SvImJ_G0018980.1 mouse_genomes_project 11 97465689 97501683 - MGP_129S1SvImJ_P0031816 Kat7 protein_coding protein_coding MGP_129S1SvImJ_T0031817.1 MGP_129S1SvImJ_G0018980.1 mouse_genomes_project 11 97466753 97473325 - MGP_129S1SvImJ_P0031817 Kat7 protein_coding protein_coding MGP_129S1SvImJ_T0031818.1 MGP_129S1SvImJ_G0018980.1 mouse_genomes_project 11 97473332 97501626 - Kat7 protein_coding processed_transcript MGP_129S1SvImJ_T0031819.1 MGP_129S1SvImJ_G0018980.1 mouse_genomes_project 11 97475571 97482418 - Kat7 protein_coding processed_transcript MGP_129S1SvImJ_T0031820.1 MGP_129S1SvImJ_G0018980.1 mouse_genomes_project 11 97492975 97501645 - Kat7 protein_coding processed_transcript MGP_129S1SvImJ_T0031821.1 MGP_129S1SvImJ_G0018980.1 mouse_genomes_project 11 97494617 97500950 - Kat7 protein_coding processed_transcript MGP_129S1SvImJ_T0031822.1 MGP_129S1SvImJ_G0018980.1 mouse_genomes_project 11 97497529 97501006 - Kat7 protein_coding processed_transcript MGP_129S1SvImJ_T0034106.1 MGP_129S1SvImJ_G0019512.1 mouse_genomes_project 11 125067346 125073591 - MGP_129S1SvImJ_P0034106 Alyref protein_coding protein_coding MGP_129S1SvImJ_T0034107.1 MGP_129S1SvImJ_G0019512.1 mouse_genomes_project 11 125069734 125070883 - Alyref protein_coding processed_transcript MGP_129S1SvImJ_T0034108.1 MGP_129S1SvImJ_G0019512.1 mouse_genomes_project 11 125070841 125073457 - Alyref protein_coding retained_intron MGP_129S1SvImJ_T0006265.1 MGP_129S1SvImJ_G0005236.1 mouse_genomes_project 11 61850003 61852725 - A530017D24Rik lincRNA lincRNA MGP_129S1SvImJ_T0006266.1 MGP_129S1SvImJ_G0005236.1 mouse_genomes_project 11 61850652 61853501 - A530017D24Rik lincRNA lincRNA MGP_129S1SvImJ_T0030071.1 MGP_129S1SvImJ_G0018555.1 mouse_genomes_project 11 70275912 70281537 - MGP_129S1SvImJ_P0030071 Fgf11 protein_coding protein_coding MGP_129S1SvImJ_T0030072.1 MGP_129S1SvImJ_G0018555.1 mouse_genomes_project 11 70275917 70281678 - MGP_129S1SvImJ_P0030072 Fgf11 protein_coding protein_coding MGP_129S1SvImJ_T0102151.1 MGP_129S1SvImJ_G0039986.1 mouse_genomes_project 11 96723130 96724777 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0012702.1 MGP_129S1SvImJ_G0010791.1 mouse_genomes_project 11 80555883 80556390 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098446.1 MGP_129S1SvImJ_G0036531.1 mouse_genomes_project 11 21395100 21395217 - Gm23114 rRNA rRNA MGP_129S1SvImJ_T0027968.1 MGP_129S1SvImJ_G0018018.1 mouse_genomes_project 11 3352734 3361585 - MGP_129S1SvImJ_P0027968 Ddx56 protein_coding protein_coding MGP_129S1SvImJ_T0027969.1 MGP_129S1SvImJ_G0018018.1 mouse_genomes_project 11 3359119 3360205 - Ddx56 protein_coding retained_intron MGP_129S1SvImJ_T0027970.1 MGP_129S1SvImJ_G0018018.1 mouse_genomes_project 11 3359449 3361585 - MGP_129S1SvImJ_P0027970 Ddx56 protein_coding protein_coding MGP_129S1SvImJ_T0027971.1 MGP_129S1SvImJ_G0018018.1 mouse_genomes_project 11 3360858 3361559 - Ddx56 protein_coding retained_intron MGP_129S1SvImJ_T0031681.1 MGP_129S1SvImJ_G0018949.1 mouse_genomes_project 11 96036459 96091728 + Spag9 protein_coding processed_transcript MGP_129S1SvImJ_T0031682.1 MGP_129S1SvImJ_G0018949.1 mouse_genomes_project 11 96036471 96098747 + Spag9 protein_coding processed_transcript MGP_129S1SvImJ_T0031683.1 MGP_129S1SvImJ_G0018949.1 mouse_genomes_project 11 96036471 96179823 + MGP_129S1SvImJ_P0031683 Spag9 protein_coding protein_coding MGP_129S1SvImJ_T0031684.1 MGP_129S1SvImJ_G0018949.1 mouse_genomes_project 11 96091669 96148055 + MGP_129S1SvImJ_P0031684 Spag9 protein_coding protein_coding MGP_129S1SvImJ_T0031685.1 MGP_129S1SvImJ_G0018949.1 mouse_genomes_project 11 96092217 96156910 + MGP_129S1SvImJ_P0031685 Spag9 protein_coding protein_coding MGP_129S1SvImJ_T0031686.1 MGP_129S1SvImJ_G0018949.1 mouse_genomes_project 11 96092289 96108444 + Spag9 protein_coding processed_transcript MGP_129S1SvImJ_T0031687.1 MGP_129S1SvImJ_G0018949.1 mouse_genomes_project 11 96092304 96179818 + MGP_129S1SvImJ_P0031687 Spag9 protein_coding protein_coding MGP_129S1SvImJ_T0031688.1 MGP_129S1SvImJ_G0018949.1 mouse_genomes_project 11 96092304 96179818 + MGP_129S1SvImJ_P0031688 Spag9 protein_coding protein_coding MGP_129S1SvImJ_T0031689.1 MGP_129S1SvImJ_G0018949.1 mouse_genomes_project 11 96092367 96179823 + MGP_129S1SvImJ_P0031689 Spag9 protein_coding protein_coding MGP_129S1SvImJ_T0031690.1 MGP_129S1SvImJ_G0018949.1 mouse_genomes_project 11 96092464 96179821 + MGP_129S1SvImJ_P0031690 Spag9 protein_coding protein_coding MGP_129S1SvImJ_T0031691.1 MGP_129S1SvImJ_G0018949.1 mouse_genomes_project 11 96120163 96144410 + Spag9 protein_coding processed_transcript MGP_129S1SvImJ_T0031692.1 MGP_129S1SvImJ_G0018949.1 mouse_genomes_project 11 96132461 96179823 + MGP_129S1SvImJ_P0031692 Spag9 protein_coding protein_coding MGP_129S1SvImJ_T0012749.1 MGP_129S1SvImJ_G0010838.1 mouse_genomes_project 11 102459875 102460043 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012626.1 MGP_129S1SvImJ_G0010715.1 mouse_genomes_project 11 54631671 54632764 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028138.1 MGP_129S1SvImJ_G0018057.1 mouse_genomes_project 11 14583934 14636454 + Wdr92 protein_coding processed_transcript MGP_129S1SvImJ_T0028142.1 MGP_129S1SvImJ_G0018057.1 mouse_genomes_project 11 14613731 14637336 + MGP_129S1SvImJ_P0028142 Wdr92 protein_coding protein_coding MGP_129S1SvImJ_T0009711.1 MGP_129S1SvImJ_G0007827.1 mouse_genomes_project 11 70471234 70471357 + Gm44349 miRNA miRNA MGP_129S1SvImJ_T0031612.1 MGP_129S1SvImJ_G0018930.1 mouse_genomes_project 11 90801681 90834645 - MGP_129S1SvImJ_P0031612 Dgke protein_coding protein_coding MGP_129S1SvImJ_T0031613.1 MGP_129S1SvImJ_G0018930.1 mouse_genomes_project 11 90804078 90828572 - MGP_129S1SvImJ_P0031613 Dgke protein_coding protein_coding MGP_129S1SvImJ_T0031614.1 MGP_129S1SvImJ_G0018930.1 mouse_genomes_project 11 90805776 90828572 - MGP_129S1SvImJ_P0031614 Dgke protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028012.1 MGP_129S1SvImJ_G0018027.1 mouse_genomes_project 11 3740625 3748859 - MGP_129S1SvImJ_P0028012 protein_coding protein_coding MGP_129S1SvImJ_T0028013.1 MGP_129S1SvImJ_G0018027.1 mouse_genomes_project 11 3740694 3742194 - MGP_129S1SvImJ_P0028013 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028014.1 MGP_129S1SvImJ_G0018027.1 mouse_genomes_project 11 3740705 3742746 - MGP_129S1SvImJ_P0028014 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0009677.1 MGP_129S1SvImJ_G0007793.1 mouse_genomes_project 11 34012147 34012257 + Mir218-2 miRNA miRNA MGP_129S1SvImJ_T0033441.1 MGP_129S1SvImJ_G0019386.1 mouse_genomes_project 11 119441491 119454769 + MGP_129S1SvImJ_P0033441 Kctd2 protein_coding protein_coding MGP_129S1SvImJ_T0033442.1 MGP_129S1SvImJ_G0019386.1 mouse_genomes_project 11 119441848 119452974 + MGP_129S1SvImJ_P0033442 Kctd2 protein_coding protein_coding MGP_129S1SvImJ_T0033443.1 MGP_129S1SvImJ_G0019386.1 mouse_genomes_project 11 119441880 119451741 + MGP_129S1SvImJ_P0033443 Kctd2 protein_coding protein_coding MGP_129S1SvImJ_T0033444.1 MGP_129S1SvImJ_G0019386.1 mouse_genomes_project 11 119442010 119444128 + Kctd2 protein_coding retained_intron MGP_129S1SvImJ_T0033445.1 MGP_129S1SvImJ_G0019386.1 mouse_genomes_project 11 119451052 119451901 + Kctd2 protein_coding processed_transcript MGP_129S1SvImJ_T0099227.1 MGP_129S1SvImJ_G0037294.1 mouse_genomes_project 11 20575292 20575396 + Gm24917 snRNA snRNA MGP_129S1SvImJ_T0027645.1 MGP_129S1SvImJ_G0017951.1 mouse_genomes_project 11 518 32535 - MGP_129S1SvImJ_P0027645 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0027646.1 MGP_129S1SvImJ_G0017951.1 mouse_genomes_project 11 21776 32520 - MGP_129S1SvImJ_P0027646 protein_coding protein_coding MGP_129S1SvImJ_T0100493.1 MGP_129S1SvImJ_G0038560.1 mouse_genomes_project 11 33585089 33585226 + Gm26070 snoRNA snoRNA MGP_129S1SvImJ_T0102147.1 MGP_129S1SvImJ_G0039982.1 mouse_genomes_project 11 84563394 84573373 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0003184.1 MGP_129S1SvImJ_G0002958.1 mouse_genomes_project 11 53716869 53723812 + Gm12223 antisense antisense MGP_129S1SvImJ_T0029018.1 MGP_129S1SvImJ_G0018288.1 mouse_genomes_project 11 52698627 52707224 + MGP_129S1SvImJ_P0029018 Zcchc10 protein_coding protein_coding MGP_129S1SvImJ_T0029019.1 MGP_129S1SvImJ_G0018288.1 mouse_genomes_project 11 52701348 52706402 + MGP_129S1SvImJ_P0029019 Zcchc10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032803.1 MGP_129S1SvImJ_G0019242.1 mouse_genomes_project 11 105692064 105706678 - MGP_129S1SvImJ_P0032803 Ccdc43 protein_coding protein_coding MGP_129S1SvImJ_T0032804.1 MGP_129S1SvImJ_G0019242.1 mouse_genomes_project 11 105692066 105706630 - MGP_129S1SvImJ_P0032804 Ccdc43 protein_coding protein_coding MGP_129S1SvImJ_T0032805.1 MGP_129S1SvImJ_G0019242.1 mouse_genomes_project 11 105693718 105706432 - Ccdc43 protein_coding processed_transcript MGP_129S1SvImJ_T0032806.1 MGP_129S1SvImJ_G0019242.1 mouse_genomes_project 11 105695730 105706630 - Ccdc43 protein_coding processed_transcript MGP_129S1SvImJ_T0032807.1 MGP_129S1SvImJ_G0019242.1 mouse_genomes_project 11 105697121 105706566 - Ccdc43 protein_coding processed_transcript MGP_129S1SvImJ_T0012758.1 MGP_129S1SvImJ_G0010847.1 mouse_genomes_project 11 105526717 105527038 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012698.1 MGP_129S1SvImJ_G0010787.1 mouse_genomes_project 11 79600660 79601779 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012781.1 MGP_129S1SvImJ_G0010870.1 mouse_genomes_project 11 115306589 115307079 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009750.1 MGP_129S1SvImJ_G0007866.1 mouse_genomes_project 11 99444559 99444666 + Mir8103 miRNA miRNA MGP_129S1SvImJ_T0003299.1 MGP_129S1SvImJ_G0003049.1 mouse_genomes_project 11 99548493 99549179 + Gm11583 antisense antisense MGP_129S1SvImJ_T0006382.1 MGP_129S1SvImJ_G0005320.1 mouse_genomes_project 11 120412140 120414777 + Gm26730 lincRNA lincRNA MGP_129S1SvImJ_T0034191.1 MGP_129S1SvImJ_G0019525.1 mouse_genomes_project 11 125210306 125214054 - MGP_129S1SvImJ_P0034191 Dcxr protein_coding protein_coding MGP_129S1SvImJ_T0034192.1 MGP_129S1SvImJ_G0019525.1 mouse_genomes_project 11 125210306 125214016 - MGP_129S1SvImJ_P0034192 Dcxr protein_coding protein_coding MGP_129S1SvImJ_T0034193.1 MGP_129S1SvImJ_G0019525.1 mouse_genomes_project 11 125210332 125214017 - Dcxr protein_coding retained_intron MGP_129S1SvImJ_T0034194.1 MGP_129S1SvImJ_G0019525.1 mouse_genomes_project 11 125210362 125214002 - Dcxr protein_coding processed_transcript MGP_129S1SvImJ_T0032035.1 MGP_129S1SvImJ_G0019036.1 mouse_genomes_project 11 100145392 100157954 - MGP_129S1SvImJ_P0032035 Pcgf2 protein_coding protein_coding MGP_129S1SvImJ_T0032036.1 MGP_129S1SvImJ_G0019036.1 mouse_genomes_project 11 100145392 100155952 - MGP_129S1SvImJ_P0032036 Pcgf2 protein_coding protein_coding MGP_129S1SvImJ_T0032037.1 MGP_129S1SvImJ_G0019036.1 mouse_genomes_project 11 100146389 100158803 - MGP_129S1SvImJ_P0032037 Pcgf2 protein_coding protein_coding MGP_129S1SvImJ_T0032038.1 MGP_129S1SvImJ_G0019036.1 mouse_genomes_project 11 100146389 100157947 - MGP_129S1SvImJ_P0032038 Pcgf2 protein_coding protein_coding MGP_129S1SvImJ_T0032039.1 MGP_129S1SvImJ_G0019036.1 mouse_genomes_project 11 100146556 100150557 - MGP_129S1SvImJ_P0032039 Pcgf2 protein_coding protein_coding MGP_129S1SvImJ_T0032040.1 MGP_129S1SvImJ_G0019036.1 mouse_genomes_project 11 100147097 100148979 - Pcgf2 protein_coding processed_transcript MGP_129S1SvImJ_T0032041.1 MGP_129S1SvImJ_G0019036.1 mouse_genomes_project 11 100153766 100156149 - Pcgf2 protein_coding processed_transcript MGP_129S1SvImJ_T0006333.1 MGP_129S1SvImJ_G0005285.1 mouse_genomes_project 11 92656755 92751132 + 4930405D11Rik lincRNA lincRNA MGP_129S1SvImJ_T0006334.1 MGP_129S1SvImJ_G0005285.1 mouse_genomes_project 11 92735489 92751076 + 4930405D11Rik lincRNA lincRNA MGP_129S1SvImJ_T0006335.1 MGP_129S1SvImJ_G0005285.1 mouse_genomes_project 11 92735514 92750982 + 4930405D11Rik lincRNA lincRNA MGP_129S1SvImJ_T0028004.1 MGP_129S1SvImJ_G0018026.1 mouse_genomes_project 11 3685551 3739541 + MGP_129S1SvImJ_P0028004 Ccm2 protein_coding protein_coding MGP_129S1SvImJ_T0028005.1 MGP_129S1SvImJ_G0018026.1 mouse_genomes_project 11 3685574 3732500 + MGP_129S1SvImJ_P0028005 Ccm2 protein_coding protein_coding MGP_129S1SvImJ_T0028006.1 MGP_129S1SvImJ_G0018026.1 mouse_genomes_project 11 3700029 3739531 + MGP_129S1SvImJ_P0028006 Ccm2 protein_coding protein_coding MGP_129S1SvImJ_T0028007.1 MGP_129S1SvImJ_G0018026.1 mouse_genomes_project 11 3700971 3736152 + MGP_129S1SvImJ_P0028007 Ccm2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028008.1 MGP_129S1SvImJ_G0018026.1 mouse_genomes_project 11 3700980 3702813 + Ccm2 protein_coding processed_transcript MGP_129S1SvImJ_T0028009.1 MGP_129S1SvImJ_G0018026.1 mouse_genomes_project 11 3700993 3736089 + MGP_129S1SvImJ_P0028009 Ccm2 protein_coding protein_coding MGP_129S1SvImJ_T0028010.1 MGP_129S1SvImJ_G0018026.1 mouse_genomes_project 11 3701089 3739539 + MGP_129S1SvImJ_P0028010 Ccm2 protein_coding protein_coding MGP_129S1SvImJ_T0028011.1 MGP_129S1SvImJ_G0018026.1 mouse_genomes_project 11 3736066 3737287 + Ccm2 protein_coding retained_intron MGP_129S1SvImJ_T0006362.1 MGP_129S1SvImJ_G0005305.1 mouse_genomes_project 11 113188613 113216492 + Gm11685 lincRNA lincRNA MGP_129S1SvImJ_T0030192.1 MGP_129S1SvImJ_G0018579.1 mouse_genomes_project 11 70516622 70546535 + MGP_129S1SvImJ_P0030192 Dlg4 protein_coding protein_coding MGP_129S1SvImJ_T0030193.1 MGP_129S1SvImJ_G0018579.1 mouse_genomes_project 11 70516778 70531645 + MGP_129S1SvImJ_P0030193 Dlg4 protein_coding protein_coding MGP_129S1SvImJ_T0030194.1 MGP_129S1SvImJ_G0018579.1 mouse_genomes_project 11 70516812 70527455 + Dlg4 protein_coding processed_transcript MGP_129S1SvImJ_T0030195.1 MGP_129S1SvImJ_G0018579.1 mouse_genomes_project 11 70518003 70546535 + MGP_129S1SvImJ_P0030195 Dlg4 protein_coding protein_coding MGP_129S1SvImJ_T0030196.1 MGP_129S1SvImJ_G0018579.1 mouse_genomes_project 11 70518253 70546535 + MGP_129S1SvImJ_P0030196 Dlg4 protein_coding protein_coding MGP_129S1SvImJ_T0030197.1 MGP_129S1SvImJ_G0018579.1 mouse_genomes_project 11 70518389 70531541 + MGP_129S1SvImJ_P0030197 Dlg4 protein_coding protein_coding MGP_129S1SvImJ_T0030198.1 MGP_129S1SvImJ_G0018579.1 mouse_genomes_project 11 70524297 70531523 + MGP_129S1SvImJ_P0030198 Dlg4 protein_coding protein_coding MGP_129S1SvImJ_T0030199.1 MGP_129S1SvImJ_G0018579.1 mouse_genomes_project 11 70527216 70531383 + MGP_129S1SvImJ_P0030199 Dlg4 protein_coding protein_coding MGP_129S1SvImJ_T0030200.1 MGP_129S1SvImJ_G0018579.1 mouse_genomes_project 11 70530133 70539416 + MGP_129S1SvImJ_P0030200 Dlg4 protein_coding protein_coding MGP_129S1SvImJ_T0030201.1 MGP_129S1SvImJ_G0018579.1 mouse_genomes_project 11 70530414 70531302 + MGP_129S1SvImJ_P0030201 Dlg4 protein_coding protein_coding MGP_129S1SvImJ_T0030202.1 MGP_129S1SvImJ_G0018579.1 mouse_genomes_project 11 70531028 70532126 + Dlg4 protein_coding retained_intron MGP_129S1SvImJ_T0030203.1 MGP_129S1SvImJ_G0018579.1 mouse_genomes_project 11 70540194 70545622 + MGP_129S1SvImJ_P0030203 Dlg4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030204.1 MGP_129S1SvImJ_G0018579.1 mouse_genomes_project 11 70545199 70545721 + Dlg4 protein_coding retained_intron MGP_129S1SvImJ_T0028170.1 MGP_129S1SvImJ_G0018066.1 mouse_genomes_project 11 17819332 17851105 - MGP_129S1SvImJ_P0028170 Slc1a4 protein_coding protein_coding MGP_129S1SvImJ_T0098810.1 MGP_129S1SvImJ_G0036894.1 mouse_genomes_project 11 71433167 71443310 + Gm19967 sense_intronic sense_intronic MGP_129S1SvImJ_T0003241.1 MGP_129S1SvImJ_G0003005.1 mouse_genomes_project 11 70141149 70150009 + Tnfsf13os antisense antisense MGP_129S1SvImJ_T0003242.1 MGP_129S1SvImJ_G0003005.1 mouse_genomes_project 11 70143340 70150386 + Tnfsf13os antisense antisense MGP_129S1SvImJ_T0003243.1 MGP_129S1SvImJ_G0003005.1 mouse_genomes_project 11 70143512 70150386 + Tnfsf13os antisense antisense MGP_129S1SvImJ_T0012752.1 MGP_129S1SvImJ_G0010841.1 mouse_genomes_project 11 104151262 104151901 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099240.1 MGP_129S1SvImJ_G0037307.1 mouse_genomes_project 11 52770549 52770656 + Gm25930 snRNA snRNA MGP_129S1SvImJ_T0100507.1 MGP_129S1SvImJ_G0038574.1 mouse_genomes_project 11 62652919 62652991 + Snord65 snoRNA snoRNA MGP_129S1SvImJ_T0012484.1 MGP_129S1SvImJ_G0010573.1 mouse_genomes_project 11 3576006 3576395 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100475.1 MGP_129S1SvImJ_G0038542.1 mouse_genomes_project 11 3684812 3684901 - Gm24000 snoRNA snoRNA MGP_129S1SvImJ_T0034080.1 MGP_129S1SvImJ_G0019504.1 mouse_genomes_project 11 124936755 124944440 + Hgs protein_coding processed_transcript MGP_129S1SvImJ_T0034081.1 MGP_129S1SvImJ_G0019504.1 mouse_genomes_project 11 124936755 124946453 + MGP_129S1SvImJ_P0034081 Hgs protein_coding protein_coding MGP_129S1SvImJ_T0034082.1 MGP_129S1SvImJ_G0019504.1 mouse_genomes_project 11 124936755 124953165 + MGP_129S1SvImJ_P0034082 Hgs protein_coding protein_coding MGP_129S1SvImJ_T0034083.1 MGP_129S1SvImJ_G0019504.1 mouse_genomes_project 11 124936755 124953160 + MGP_129S1SvImJ_P0034083 Hgs protein_coding protein_coding MGP_129S1SvImJ_T0034084.1 MGP_129S1SvImJ_G0019504.1 mouse_genomes_project 11 124936755 124953160 + MGP_129S1SvImJ_P0034084 Hgs protein_coding protein_coding MGP_129S1SvImJ_T0034085.1 MGP_129S1SvImJ_G0019504.1 mouse_genomes_project 11 124946635 124949308 + MGP_129S1SvImJ_P0034085 Hgs protein_coding protein_coding MGP_129S1SvImJ_T0032279.1 MGP_129S1SvImJ_G0019109.1 mouse_genomes_project 11 102343809 102344327 - MGP_129S1SvImJ_P0032279 Gm11555 protein_coding protein_coding MGP_129S1SvImJ_T0006320.1 MGP_129S1SvImJ_G0005276.1 mouse_genomes_project 11 89717900 89728126 - 2010015M23Rik lincRNA lincRNA MGP_129S1SvImJ_T0102161.1 MGP_129S1SvImJ_G0039996.1 mouse_genomes_project 11 102686356 102686773 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0028452.1 MGP_129S1SvImJ_G0018128.1 mouse_genomes_project 11 30407122 30419838 - MGP_129S1SvImJ_P0028452 Rhbdf1 protein_coding protein_coding MGP_129S1SvImJ_T0028453.1 MGP_129S1SvImJ_G0018128.1 mouse_genomes_project 11 30407123 30414855 - Rhbdf1 protein_coding retained_intron MGP_129S1SvImJ_T0028454.1 MGP_129S1SvImJ_G0018128.1 mouse_genomes_project 11 30407124 30419818 - MGP_129S1SvImJ_P0028454 Rhbdf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028455.1 MGP_129S1SvImJ_G0018128.1 mouse_genomes_project 11 30407341 30408677 - MGP_129S1SvImJ_P0028455 Rhbdf1 protein_coding protein_coding MGP_129S1SvImJ_T0028456.1 MGP_129S1SvImJ_G0018128.1 mouse_genomes_project 11 30407487 30408438 - Rhbdf1 protein_coding retained_intron MGP_129S1SvImJ_T0028457.1 MGP_129S1SvImJ_G0018128.1 mouse_genomes_project 11 30407936 30408808 - Rhbdf1 protein_coding retained_intron MGP_129S1SvImJ_T0028458.1 MGP_129S1SvImJ_G0018128.1 mouse_genomes_project 11 30411823 30419818 - MGP_129S1SvImJ_P0028458 Rhbdf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028459.1 MGP_129S1SvImJ_G0018128.1 mouse_genomes_project 11 30412605 30419782 - MGP_129S1SvImJ_P0028459 Rhbdf1 protein_coding protein_coding MGP_129S1SvImJ_T0028460.1 MGP_129S1SvImJ_G0018128.1 mouse_genomes_project 11 30413546 30419797 - MGP_129S1SvImJ_P0028460 Rhbdf1 protein_coding protein_coding MGP_129S1SvImJ_T0009691.1 MGP_129S1SvImJ_G0007807.1 mouse_genomes_project 11 52790608 52790679 + Mir6920 miRNA miRNA MGP_129S1SvImJ_T0032216.1 MGP_129S1SvImJ_G0019078.1 mouse_genomes_project 11 101555292 101604477 + MGP_129S1SvImJ_P0032216 Rara protein_coding protein_coding MGP_129S1SvImJ_T0032217.1 MGP_129S1SvImJ_G0019078.1 mouse_genomes_project 11 101565174 101604477 + MGP_129S1SvImJ_P0032217 Rara protein_coding protein_coding MGP_129S1SvImJ_T0032218.1 MGP_129S1SvImJ_G0019078.1 mouse_genomes_project 11 101565194 101605251 + MGP_129S1SvImJ_P0032218 Rara protein_coding protein_coding MGP_129S1SvImJ_T0032219.1 MGP_129S1SvImJ_G0019078.1 mouse_genomes_project 11 101565804 101578962 + Rara protein_coding processed_transcript MGP_129S1SvImJ_T0032220.1 MGP_129S1SvImJ_G0019078.1 mouse_genomes_project 11 101567187 101605251 + MGP_129S1SvImJ_P0032220 Rara protein_coding protein_coding MGP_129S1SvImJ_T0032221.1 MGP_129S1SvImJ_G0019078.1 mouse_genomes_project 11 101567188 101579091 + Rara protein_coding processed_transcript MGP_129S1SvImJ_T0032222.1 MGP_129S1SvImJ_G0019078.1 mouse_genomes_project 11 101589205 101605251 + MGP_129S1SvImJ_P0032222 Rara protein_coding protein_coding MGP_129S1SvImJ_T0028912.1 MGP_129S1SvImJ_G0018260.1 mouse_genomes_project 11 50169673 50170621 + MGP_129S1SvImJ_P0028912 Olfr1378 protein_coding protein_coding MGP_129S1SvImJ_T0028841.1 MGP_129S1SvImJ_G0018243.1 mouse_genomes_project 11 49364109 49377157 - MGP_129S1SvImJ_P0028841 Sqstm1 protein_coding protein_coding MGP_129S1SvImJ_T0028842.1 MGP_129S1SvImJ_G0018243.1 mouse_genomes_project 11 49364895 49377193 - MGP_129S1SvImJ_P0028842 Sqstm1 protein_coding protein_coding MGP_129S1SvImJ_T0028843.1 MGP_129S1SvImJ_G0018243.1 mouse_genomes_project 11 49364910 49367698 - MGP_129S1SvImJ_P0028843 Sqstm1 protein_coding protein_coding MGP_129S1SvImJ_T0028844.1 MGP_129S1SvImJ_G0018243.1 mouse_genomes_project 11 49365354 49377131 - MGP_129S1SvImJ_P0028844 Sqstm1 protein_coding protein_coding MGP_129S1SvImJ_T0028845.1 MGP_129S1SvImJ_G0018243.1 mouse_genomes_project 11 49367055 49372466 - Sqstm1 protein_coding retained_intron MGP_129S1SvImJ_T0028846.1 MGP_129S1SvImJ_G0018243.1 mouse_genomes_project 11 49367186 49367862 - Sqstm1 protein_coding retained_intron MGP_129S1SvImJ_T0028847.1 MGP_129S1SvImJ_G0018243.1 mouse_genomes_project 11 49372044 49373685 - Sqstm1 protein_coding retained_intron MGP_129S1SvImJ_T0031066.1 MGP_129S1SvImJ_G0018786.1 mouse_genomes_project 11 79542632 79556138 - MGP_129S1SvImJ_P0031066 Tnfaip1 protein_coding protein_coding MGP_129S1SvImJ_T0031067.1 MGP_129S1SvImJ_G0018786.1 mouse_genomes_project 11 79542632 79556199 - MGP_129S1SvImJ_P0031067 Tnfaip1 protein_coding protein_coding MGP_129S1SvImJ_T0033992.1 MGP_129S1SvImJ_G0019488.1 mouse_genomes_project 11 124437630 124480430 - Aatk protein_coding processed_transcript MGP_129S1SvImJ_T0033993.1 MGP_129S1SvImJ_G0019488.1 mouse_genomes_project 11 124437630 124442726 - Aatk protein_coding processed_transcript MGP_129S1SvImJ_T0033994.1 MGP_129S1SvImJ_G0019488.1 mouse_genomes_project 11 124437630 124480333 - MGP_129S1SvImJ_P0033994 Aatk protein_coding protein_coding MGP_129S1SvImJ_T0033995.1 MGP_129S1SvImJ_G0019488.1 mouse_genomes_project 11 124439533 124455069 - MGP_129S1SvImJ_P0033995 Aatk protein_coding protein_coding MGP_129S1SvImJ_T0033996.1 MGP_129S1SvImJ_G0019488.1 mouse_genomes_project 11 124442712 124448893 - Aatk protein_coding processed_transcript MGP_129S1SvImJ_T0033997.1 MGP_129S1SvImJ_G0019488.1 mouse_genomes_project 11 124444007 124449152 - Aatk protein_coding processed_transcript MGP_129S1SvImJ_T0033998.1 MGP_129S1SvImJ_G0019488.1 mouse_genomes_project 11 124447387 124448868 - Aatk protein_coding processed_transcript MGP_129S1SvImJ_T0033999.1 MGP_129S1SvImJ_G0019488.1 mouse_genomes_project 11 124448733 124452162 - Aatk protein_coding processed_transcript MGP_129S1SvImJ_T0098733.1 MGP_129S1SvImJ_G0036818.1 mouse_genomes_project 11 121273011 121273204 + Gm26083 scaRNA scaRNA MGP_129S1SvImJ_T0029037.1 MGP_129S1SvImJ_G0018294.1 mouse_genomes_project 11 52841315 52851866 + MGP_129S1SvImJ_P0029037 Shroom1 protein_coding protein_coding MGP_129S1SvImJ_T0029038.1 MGP_129S1SvImJ_G0018294.1 mouse_genomes_project 11 52841340 52851398 + MGP_129S1SvImJ_P0029038 Shroom1 protein_coding protein_coding MGP_129S1SvImJ_T0029039.1 MGP_129S1SvImJ_G0018294.1 mouse_genomes_project 11 52841356 52851855 + Shroom1 protein_coding retained_intron MGP_129S1SvImJ_T0029040.1 MGP_129S1SvImJ_G0018294.1 mouse_genomes_project 11 52841359 52851601 + Shroom1 protein_coding retained_intron MGP_129S1SvImJ_T0029041.1 MGP_129S1SvImJ_G0018294.1 mouse_genomes_project 11 52841389 52851402 + MGP_129S1SvImJ_P0029041 Shroom1 protein_coding protein_coding MGP_129S1SvImJ_T0029042.1 MGP_129S1SvImJ_G0018294.1 mouse_genomes_project 11 52849595 52849953 + Shroom1 protein_coding processed_transcript MGP_129S1SvImJ_T0012788.1 MGP_129S1SvImJ_G0010877.1 mouse_genomes_project 11 118903173 118903574 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100505.1 MGP_129S1SvImJ_G0038572.1 mouse_genomes_project 11 62651484 62651556 + Snord49b snoRNA snoRNA MGP_129S1SvImJ_T0033940.1 MGP_129S1SvImJ_G0019479.1 mouse_genomes_project 11 123687500 123728489 + MGP_129S1SvImJ_P0033940 Card14 protein_coding protein_coding MGP_129S1SvImJ_T0033941.1 MGP_129S1SvImJ_G0019479.1 mouse_genomes_project 11 123698527 123728489 + MGP_129S1SvImJ_P0033941 Card14 protein_coding protein_coding MGP_129S1SvImJ_T0033942.1 MGP_129S1SvImJ_G0019479.1 mouse_genomes_project 11 123703965 123728301 + Card14 protein_coding processed_transcript MGP_129S1SvImJ_T0033943.1 MGP_129S1SvImJ_G0019479.1 mouse_genomes_project 11 123706259 123728488 + Card14 protein_coding processed_transcript MGP_129S1SvImJ_T0009788.1 MGP_129S1SvImJ_G0007904.1 mouse_genomes_project 11 124793926 124793980 - Mir6935 miRNA miRNA MGP_129S1SvImJ_T0032551.1 MGP_129S1SvImJ_G0019196.1 mouse_genomes_project 11 104175388 104184232 + MGP_129S1SvImJ_P0032551 Aoc3 protein_coding protein_coding MGP_129S1SvImJ_T0032552.1 MGP_129S1SvImJ_G0019196.1 mouse_genomes_project 11 104175852 104186604 + MGP_129S1SvImJ_P0032552 Aoc3 protein_coding protein_coding MGP_129S1SvImJ_T0012664.1 MGP_129S1SvImJ_G0010753.1 mouse_genomes_project 11 68429921 68430306 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028955.1 MGP_129S1SvImJ_G0018272.1 mouse_genomes_project 11 50895883 50903674 - MGP_129S1SvImJ_P0028955 N4bp3 protein_coding protein_coding MGP_129S1SvImJ_T0028956.1 MGP_129S1SvImJ_G0018272.1 mouse_genomes_project 11 50898374 50903669 - MGP_129S1SvImJ_P0028956 N4bp3 protein_coding protein_coding MGP_129S1SvImJ_T0028957.1 MGP_129S1SvImJ_G0018272.1 mouse_genomes_project 11 50898439 50903652 - MGP_129S1SvImJ_P0028957 N4bp3 protein_coding protein_coding MGP_129S1SvImJ_T0031332.1 MGP_129S1SvImJ_G0018866.1 mouse_genomes_project 11 85481365 85532812 - MGP_129S1SvImJ_P0031332 Tada2a protein_coding protein_coding MGP_129S1SvImJ_T0031333.1 MGP_129S1SvImJ_G0018866.1 mouse_genomes_project 11 85481977 85485398 - Tada2a protein_coding processed_transcript MGP_129S1SvImJ_T0031334.1 MGP_129S1SvImJ_G0018866.1 mouse_genomes_project 11 85482078 85496231 - MGP_129S1SvImJ_P0031334 Tada2a protein_coding protein_coding MGP_129S1SvImJ_T0031335.1 MGP_129S1SvImJ_G0018866.1 mouse_genomes_project 11 85484479 85489908 - Tada2a protein_coding processed_transcript MGP_129S1SvImJ_T0031336.1 MGP_129S1SvImJ_G0018866.1 mouse_genomes_project 11 85487879 85489960 - Tada2a protein_coding processed_transcript MGP_129S1SvImJ_T0011313.1 MGP_129S1SvImJ_G0009429.1 mouse_genomes_project 11 534717 534805 - Gm27937 misc_RNA misc_RNA MGP_129S1SvImJ_T0009731.1 MGP_129S1SvImJ_G0007847.1 mouse_genomes_project 11 79041850 79041922 + Mir451a miRNA miRNA MGP_129S1SvImJ_T0032082.1 MGP_129S1SvImJ_G0019046.1 mouse_genomes_project 11 100479167 100485573 - MGP_129S1SvImJ_P0032082 Arl5c protein_coding protein_coding MGP_129S1SvImJ_T0032083.1 MGP_129S1SvImJ_G0019046.1 mouse_genomes_project 11 100483328 100485321 - MGP_129S1SvImJ_P0032083 Arl5c protein_coding protein_coding MGP_129S1SvImJ_T0003157.1 MGP_129S1SvImJ_G0002932.1 mouse_genomes_project 11 28140481 28142208 + Gm29237 antisense antisense MGP_129S1SvImJ_T0029179.1 MGP_129S1SvImJ_G0018326.1 mouse_genomes_project 11 54638754 54665692 - MGP_129S1SvImJ_P0029179 Slc36a3 protein_coding protein_coding MGP_129S1SvImJ_T0029180.1 MGP_129S1SvImJ_G0018326.1 mouse_genomes_project 11 54638764 54665670 - MGP_129S1SvImJ_P0029180 Slc36a3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029181.1 MGP_129S1SvImJ_G0018326.1 mouse_genomes_project 11 54663474 54665692 - MGP_129S1SvImJ_P0029181 Slc36a3 protein_coding protein_coding MGP_129S1SvImJ_T0012768.1 MGP_129S1SvImJ_G0010857.1 mouse_genomes_project 11 108241691 108242731 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009778.1 MGP_129S1SvImJ_G0007894.1 mouse_genomes_project 11 121273116 121273226 + Mir6516 miRNA miRNA MGP_129S1SvImJ_T0029274.1 MGP_129S1SvImJ_G0018361.1 mouse_genomes_project 11 58271307 58295045 - MGP_129S1SvImJ_P0029274 protein_coding protein_coding MGP_129S1SvImJ_T0028484.1 MGP_129S1SvImJ_G0018133.1 mouse_genomes_project 11 30511818 30514276 + MGP_129S1SvImJ_P0028484 Hbq1a protein_coding protein_coding MGP_129S1SvImJ_T0029213.1 MGP_129S1SvImJ_G0018337.1 mouse_genomes_project 11 57134544 57151031 + MGP_129S1SvImJ_P0029213 Mfap3 protein_coding protein_coding MGP_129S1SvImJ_T0029214.1 MGP_129S1SvImJ_G0018337.1 mouse_genomes_project 11 57134566 57146187 + Mfap3 protein_coding retained_intron MGP_129S1SvImJ_T0029215.1 MGP_129S1SvImJ_G0018337.1 mouse_genomes_project 11 57134567 57151030 + MGP_129S1SvImJ_P0029215 Mfap3 protein_coding protein_coding MGP_129S1SvImJ_T0029216.1 MGP_129S1SvImJ_G0018337.1 mouse_genomes_project 11 57138841 57146755 + MGP_129S1SvImJ_P0029216 Mfap3 protein_coding protein_coding MGP_129S1SvImJ_T0029132.1 MGP_129S1SvImJ_G0018315.1 mouse_genomes_project 11 53843681 53898893 + Meikin protein_coding retained_intron MGP_129S1SvImJ_T0029133.1 MGP_129S1SvImJ_G0018315.1 mouse_genomes_project 11 53843681 53898928 + MGP_129S1SvImJ_P0029133 Meikin protein_coding protein_coding MGP_129S1SvImJ_T0009695.1 MGP_129S1SvImJ_G0007811.1 mouse_genomes_project 11 58736769 58736907 - Gm44313 miRNA miRNA MGP_129S1SvImJ_T0012580.1 MGP_129S1SvImJ_G0010669.1 mouse_genomes_project 11 38355238 38355881 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012480.1 MGP_129S1SvImJ_G0010569.1 mouse_genomes_project 11 3274704 3275060 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017200.1 MGP_129S1SvImJ_G0015158.1 mouse_genomes_project 11 20561286 20565692 + processed_transcript processed_transcript MGP_129S1SvImJ_T0030969.1 MGP_129S1SvImJ_G0018765.1 mouse_genomes_project 11 79147775 79158241 - Nek8 protein_coding retained_intron MGP_129S1SvImJ_T0030970.1 MGP_129S1SvImJ_G0018765.1 mouse_genomes_project 11 79147775 79158305 - MGP_129S1SvImJ_P0030970 Nek8 protein_coding protein_coding MGP_129S1SvImJ_T0030971.1 MGP_129S1SvImJ_G0018765.1 mouse_genomes_project 11 79147779 79149057 - Nek8 protein_coding retained_intron MGP_129S1SvImJ_T0030972.1 MGP_129S1SvImJ_G0018765.1 mouse_genomes_project 11 79148190 79158257 - Nek8 protein_coding retained_intron MGP_129S1SvImJ_T0030973.1 MGP_129S1SvImJ_G0018765.1 mouse_genomes_project 11 79148923 79149703 - Nek8 protein_coding retained_intron MGP_129S1SvImJ_T0030974.1 MGP_129S1SvImJ_G0018765.1 mouse_genomes_project 11 79150641 79151498 - Nek8 protein_coding retained_intron MGP_129S1SvImJ_T0030975.1 MGP_129S1SvImJ_G0018765.1 mouse_genomes_project 11 79151660 79158244 - Nek8 protein_coding retained_intron MGP_129S1SvImJ_T0030976.1 MGP_129S1SvImJ_G0018765.1 mouse_genomes_project 11 79152856 79158264 - MGP_129S1SvImJ_P0030976 Nek8 protein_coding protein_coding MGP_129S1SvImJ_T0030795.1 MGP_129S1SvImJ_G0018729.1 mouse_genomes_project 11 76997551 77037045 + Fam57a protein_coding processed_transcript MGP_129S1SvImJ_T0030796.1 MGP_129S1SvImJ_G0018729.1 mouse_genomes_project 11 77021957 77022919 + Fam57a protein_coding retained_intron MGP_129S1SvImJ_T0030797.1 MGP_129S1SvImJ_G0018729.1 mouse_genomes_project 11 77021994 77029089 + MGP_129S1SvImJ_P0030797 Fam57a protein_coding protein_coding MGP_129S1SvImJ_T0030798.1 MGP_129S1SvImJ_G0018729.1 mouse_genomes_project 11 77022027 77027994 + MGP_129S1SvImJ_P0030798 Fam57a protein_coding protein_coding MGP_129S1SvImJ_T0030719.1 MGP_129S1SvImJ_G0018714.1 mouse_genomes_project 11 76238000 76262623 + MGP_129S1SvImJ_P0030719 Prpf8 protein_coding protein_coding MGP_129S1SvImJ_T0030720.1 MGP_129S1SvImJ_G0018714.1 mouse_genomes_project 11 76238004 76262625 + MGP_129S1SvImJ_P0030720 Prpf8 protein_coding protein_coding MGP_129S1SvImJ_T0030721.1 MGP_129S1SvImJ_G0018714.1 mouse_genomes_project 11 76238039 76246999 + MGP_129S1SvImJ_P0030721 Prpf8 protein_coding protein_coding MGP_129S1SvImJ_T0030722.1 MGP_129S1SvImJ_G0018714.1 mouse_genomes_project 11 76243424 76245114 + Prpf8 protein_coding retained_intron MGP_129S1SvImJ_T0029970.1 MGP_129S1SvImJ_G0018530.1 mouse_genomes_project 11 69820035 69824212 - protein_coding processed_transcript MGP_129S1SvImJ_T0029971.1 MGP_129S1SvImJ_G0018530.1 mouse_genomes_project 11 69821369 69823914 - MGP_129S1SvImJ_P0029971 protein_coding protein_coding MGP_129S1SvImJ_T0029972.1 MGP_129S1SvImJ_G0018530.1 mouse_genomes_project 11 69821722 69823914 - MGP_129S1SvImJ_P0029972 protein_coding protein_coding MGP_129S1SvImJ_T0032274.1 MGP_129S1SvImJ_G0019104.1 mouse_genomes_project 11 102281603 102283375 - MGP_129S1SvImJ_P0032274 protein_coding protein_coding MGP_129S1SvImJ_T0098732.1 MGP_129S1SvImJ_G0036817.1 mouse_genomes_project 11 120253721 120253848 - Gm26413 scaRNA scaRNA MGP_129S1SvImJ_T0028703.1 MGP_129S1SvImJ_G0018196.1 mouse_genomes_project 11 45444608 45458601 + MGP_129S1SvImJ_P0028703 Gm12169 protein_coding protein_coding MGP_129S1SvImJ_T0030634.1 MGP_129S1SvImJ_G0018696.1 mouse_genomes_project 11 75350336 75357406 + Cluh protein_coding processed_transcript MGP_129S1SvImJ_T0030635.1 MGP_129S1SvImJ_G0018696.1 mouse_genomes_project 11 75350356 75370749 + MGP_129S1SvImJ_P0030635 Cluh protein_coding protein_coding MGP_129S1SvImJ_T0030636.1 MGP_129S1SvImJ_G0018696.1 mouse_genomes_project 11 75350356 75371691 + MGP_129S1SvImJ_P0030636 Cluh protein_coding protein_coding MGP_129S1SvImJ_T0030637.1 MGP_129S1SvImJ_G0018696.1 mouse_genomes_project 11 75350381 75371691 + Cluh protein_coding retained_intron MGP_129S1SvImJ_T0030638.1 MGP_129S1SvImJ_G0018696.1 mouse_genomes_project 11 75350671 75358194 + Cluh protein_coding processed_transcript MGP_129S1SvImJ_T0030639.1 MGP_129S1SvImJ_G0018696.1 mouse_genomes_project 11 75365319 75366146 + Cluh protein_coding retained_intron MGP_129S1SvImJ_T0029822.1 MGP_129S1SvImJ_G0018500.1 mouse_genomes_project 11 68778784 68845584 + MGP_129S1SvImJ_P0029822 Pik3r5 protein_coding protein_coding MGP_129S1SvImJ_T0029823.1 MGP_129S1SvImJ_G0018500.1 mouse_genomes_project 11 68778788 68824502 + Pik3r5 protein_coding processed_transcript MGP_129S1SvImJ_T0029824.1 MGP_129S1SvImJ_G0018500.1 mouse_genomes_project 11 68778823 68787037 + Pik3r5 protein_coding processed_transcript MGP_129S1SvImJ_T0029825.1 MGP_129S1SvImJ_G0018500.1 mouse_genomes_project 11 68821532 68843996 + Pik3r5 protein_coding processed_transcript MGP_129S1SvImJ_T0029826.1 MGP_129S1SvImJ_G0018500.1 mouse_genomes_project 11 68823218 68841075 + Pik3r5 protein_coding processed_transcript MGP_129S1SvImJ_T0098806.1 MGP_129S1SvImJ_G0036890.1 mouse_genomes_project 11 207129 208472 - Gm11948 sense_intronic sense_intronic MGP_129S1SvImJ_T0011817.1 MGP_129S1SvImJ_G0009930.1 mouse_genomes_project 11 74417873 74418936 - MGP_129S1SvImJ_P0011817 Olfr388-ps1 polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0029176.1 MGP_129S1SvImJ_G0018324.1 mouse_genomes_project 11 54553635 54586564 - MGP_129S1SvImJ_P0029176 Ccdc69 protein_coding protein_coding MGP_129S1SvImJ_T0029177.1 MGP_129S1SvImJ_G0018324.1 mouse_genomes_project 11 54554635 54586588 - MGP_129S1SvImJ_P0029177 Ccdc69 protein_coding protein_coding MGP_129S1SvImJ_T0029535.1 MGP_129S1SvImJ_G0018437.1 mouse_genomes_project 11 61305504 61342602 - MGP_129S1SvImJ_P0029535 Slc47a1 protein_coding protein_coding MGP_129S1SvImJ_T0029536.1 MGP_129S1SvImJ_G0018437.1 mouse_genomes_project 11 61305505 61342585 - MGP_129S1SvImJ_P0029536 Slc47a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029537.1 MGP_129S1SvImJ_G0018437.1 mouse_genomes_project 11 61325536 61328485 - Slc47a1 protein_coding processed_transcript MGP_129S1SvImJ_T0029538.1 MGP_129S1SvImJ_G0018437.1 mouse_genomes_project 11 61325713 61342866 - MGP_129S1SvImJ_P0029538 Slc47a1 protein_coding protein_coding MGP_129S1SvImJ_T0012619.1 MGP_129S1SvImJ_G0010708.1 mouse_genomes_project 11 53340359 53340756 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006305.1 MGP_129S1SvImJ_G0005266.1 mouse_genomes_project 11 81150187 81156267 - Gm26563 lincRNA lincRNA MGP_129S1SvImJ_T0006306.1 MGP_129S1SvImJ_G0005266.1 mouse_genomes_project 11 81151313 81163516 - Gm26563 lincRNA lincRNA MGP_129S1SvImJ_T0028531.1 MGP_129S1SvImJ_G0018151.1 mouse_genomes_project 11 32558580 33136401 - MGP_129S1SvImJ_P0028531 Dock2 protein_coding protein_coding MGP_129S1SvImJ_T0028532.1 MGP_129S1SvImJ_G0018151.1 mouse_genomes_project 11 32562324 32563436 - Dock2 protein_coding retained_intron MGP_129S1SvImJ_T0028533.1 MGP_129S1SvImJ_G0018151.1 mouse_genomes_project 11 32607350 33136401 - MGP_129S1SvImJ_P0028533 Dock2 protein_coding protein_coding MGP_129S1SvImJ_T0028534.1 MGP_129S1SvImJ_G0018151.1 mouse_genomes_project 11 32641944 32646934 - Dock2 protein_coding retained_intron MGP_129S1SvImJ_T0028537.1 MGP_129S1SvImJ_G0018151.1 mouse_genomes_project 11 32701291 33037298 - MGP_129S1SvImJ_P0028537 Dock2 protein_coding protein_coding MGP_129S1SvImJ_T0028538.1 MGP_129S1SvImJ_G0018151.1 mouse_genomes_project 11 32779957 33136392 - Dock2 protein_coding retained_intron MGP_129S1SvImJ_T0028539.1 MGP_129S1SvImJ_G0018151.1 mouse_genomes_project 11 32779957 33136401 - MGP_129S1SvImJ_P0028539 Dock2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033871.1 MGP_129S1SvImJ_G0019465.1 mouse_genomes_project 11 122656982 122667897 - MGP_129S1SvImJ_P0033871 BC100451 protein_coding protein_coding MGP_129S1SvImJ_T0033872.1 MGP_129S1SvImJ_G0019465.1 mouse_genomes_project 11 122657037 122658639 - MGP_129S1SvImJ_P0033872 BC100451 protein_coding protein_coding MGP_129S1SvImJ_T0100503.1 MGP_129S1SvImJ_G0038570.1 mouse_genomes_project 11 58407083 58407215 + Gm22599 snoRNA snoRNA MGP_129S1SvImJ_T0032495.1 MGP_129S1SvImJ_G0019187.1 mouse_genomes_project 11 104020929 104067225 - MGP_129S1SvImJ_P0032495 Ezh1 protein_coding protein_coding MGP_129S1SvImJ_T0032496.1 MGP_129S1SvImJ_G0019187.1 mouse_genomes_project 11 104023097 104024245 - Ezh1 protein_coding processed_transcript MGP_129S1SvImJ_T0032497.1 MGP_129S1SvImJ_G0019187.1 mouse_genomes_project 11 104023552 104033297 - Ezh1 protein_coding processed_transcript MGP_129S1SvImJ_T0032498.1 MGP_129S1SvImJ_G0019187.1 mouse_genomes_project 11 104027209 104067228 - MGP_129S1SvImJ_P0032498 Ezh1 protein_coding protein_coding MGP_129S1SvImJ_T0032499.1 MGP_129S1SvImJ_G0019187.1 mouse_genomes_project 11 104028454 104030760 - Ezh1 protein_coding processed_transcript MGP_129S1SvImJ_T0032500.1 MGP_129S1SvImJ_G0019187.1 mouse_genomes_project 11 104029119 104051371 - Ezh1 protein_coding processed_transcript MGP_129S1SvImJ_T0032501.1 MGP_129S1SvImJ_G0019187.1 mouse_genomes_project 11 104047653 104050198 - Ezh1 protein_coding processed_transcript MGP_129S1SvImJ_T0032502.1 MGP_129S1SvImJ_G0019187.1 mouse_genomes_project 11 104059203 104067244 - Ezh1 protein_coding processed_transcript MGP_129S1SvImJ_T0027909.1 MGP_129S1SvImJ_G0018002.1 mouse_genomes_project 11 2592204 2606779 - MGP_129S1SvImJ_P0027909 Ccdc117 protein_coding protein_coding MGP_129S1SvImJ_T0028375.1 MGP_129S1SvImJ_G0018110.1 mouse_genomes_project 11 27565836 27601237 + MGP_129S1SvImJ_P0028375 Clhc1 protein_coding protein_coding MGP_129S1SvImJ_T0028376.1 MGP_129S1SvImJ_G0018110.1 mouse_genomes_project 11 27581613 27601216 + Clhc1 protein_coding processed_transcript MGP_129S1SvImJ_T0028377.1 MGP_129S1SvImJ_G0018110.1 mouse_genomes_project 11 27581630 27601074 + Clhc1 protein_coding processed_transcript MGP_129S1SvImJ_T0028519.1 MGP_129S1SvImJ_G0018147.1 mouse_genomes_project 11 31942690 31995691 - MGP_129S1SvImJ_P0028519 Kcnip1 protein_coding protein_coding MGP_129S1SvImJ_T0028520.1 MGP_129S1SvImJ_G0018147.1 mouse_genomes_project 11 31942698 32176339 - MGP_129S1SvImJ_P0028520 Kcnip1 protein_coding protein_coding MGP_129S1SvImJ_T0028521.1 MGP_129S1SvImJ_G0018147.1 mouse_genomes_project 11 31942698 32176397 - MGP_129S1SvImJ_P0028521 Kcnip1 protein_coding protein_coding MGP_129S1SvImJ_T0028522.1 MGP_129S1SvImJ_G0018147.1 mouse_genomes_project 11 31954088 32325813 - Kcnip1 protein_coding processed_transcript MGP_129S1SvImJ_T0028523.1 MGP_129S1SvImJ_G0018147.1 mouse_genomes_project 11 31954412 32325649 - Kcnip1 protein_coding processed_transcript MGP_129S1SvImJ_T0032576.1 MGP_129S1SvImJ_G0019205.1 mouse_genomes_project 11 104333005 104339637 + Rnd2 protein_coding processed_transcript MGP_129S1SvImJ_T0032577.1 MGP_129S1SvImJ_G0019205.1 mouse_genomes_project 11 104333490 104338889 + Rnd2 protein_coding processed_transcript MGP_129S1SvImJ_T0032578.1 MGP_129S1SvImJ_G0019205.1 mouse_genomes_project 11 104336181 104339637 + MGP_129S1SvImJ_P0032578 Rnd2 protein_coding protein_coding MGP_129S1SvImJ_T0032412.1 MGP_129S1SvImJ_G0019166.1 mouse_genomes_project 11 103479347 103480073 + MGP_129S1SvImJ_P0032412 Hspb9 protein_coding protein_coding MGP_129S1SvImJ_T0032413.1 MGP_129S1SvImJ_G0019166.1 mouse_genomes_project 11 103479419 103480071 + MGP_129S1SvImJ_P0032413 Hspb9 protein_coding protein_coding MGP_129S1SvImJ_T0012726.1 MGP_129S1SvImJ_G0010815.1 mouse_genomes_project 11 92376005 92376668 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009705.1 MGP_129S1SvImJ_G0007821.1 mouse_genomes_project 11 68558383 68558503 + Mir6406 miRNA miRNA MGP_129S1SvImJ_T0012601.1 MGP_129S1SvImJ_G0010690.1 mouse_genomes_project 11 47752810 47755400 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012688.1 MGP_129S1SvImJ_G0010777.1 mouse_genomes_project 11 76172995 76173395 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034151.1 MGP_129S1SvImJ_G0019519.1 mouse_genomes_project 11 125126269 125128397 - MGP_129S1SvImJ_P0034151 Myadml2 protein_coding protein_coding MGP_129S1SvImJ_T0034152.1 MGP_129S1SvImJ_G0019519.1 mouse_genomes_project 11 125126270 125127321 - Myadml2 protein_coding processed_transcript MGP_129S1SvImJ_T0011327.1 MGP_129S1SvImJ_G0009443.1 mouse_genomes_project 11 86792320 86792616 - Gm22587 misc_RNA misc_RNA MGP_129S1SvImJ_T0032232.1 MGP_129S1SvImJ_G0019081.1 mouse_genomes_project 11 101674984 101691666 + MGP_129S1SvImJ_P0032232 Igfbp4 protein_coding protein_coding MGP_129S1SvImJ_T0032233.1 MGP_129S1SvImJ_G0019081.1 mouse_genomes_project 11 101675500 101686825 + MGP_129S1SvImJ_P0032233 Igfbp4 protein_coding protein_coding MGP_129S1SvImJ_T0032234.1 MGP_129S1SvImJ_G0019081.1 mouse_genomes_project 11 101675926 101683484 + Igfbp4 protein_coding processed_transcript MGP_129S1SvImJ_T0032235.1 MGP_129S1SvImJ_G0019081.1 mouse_genomes_project 11 101678709 101687044 + Igfbp4 protein_coding processed_transcript MGP_129S1SvImJ_T0032236.1 MGP_129S1SvImJ_G0019081.1 mouse_genomes_project 11 101679878 101686939 + Igfbp4 protein_coding processed_transcript MGP_129S1SvImJ_T0032237.1 MGP_129S1SvImJ_G0019081.1 mouse_genomes_project 11 101682421 101686936 + MGP_129S1SvImJ_P0032237 Igfbp4 protein_coding protein_coding MGP_129S1SvImJ_T0006374.1 MGP_129S1SvImJ_G0005313.1 mouse_genomes_project 11 116994265 117000621 - 4732490B19Rik lincRNA lincRNA MGP_129S1SvImJ_T0100477.1 MGP_129S1SvImJ_G0038544.1 mouse_genomes_project 11 3769090 3769226 - Snora5c snoRNA snoRNA MGP_129S1SvImJ_T0031143.1 MGP_129S1SvImJ_G0018808.1 mouse_genomes_project 11 81332965 81348383 + MGP_129S1SvImJ_P0031143 Rnf135 protein_coding protein_coding MGP_129S1SvImJ_T0031144.1 MGP_129S1SvImJ_G0018808.1 mouse_genomes_project 11 81333337 81338707 + Rnf135 protein_coding processed_transcript MGP_129S1SvImJ_T0003175.1 MGP_129S1SvImJ_G0002950.1 mouse_genomes_project 11 50452004 50453701 + Gm12569 antisense antisense MGP_129S1SvImJ_T0003176.1 MGP_129S1SvImJ_G0002950.1 mouse_genomes_project 11 50452664 50453556 + Gm12569 antisense antisense MGP_129S1SvImJ_T0029402.1 MGP_129S1SvImJ_G0018410.1 mouse_genomes_project 11 59820235 59825068 - MGP_129S1SvImJ_P0029402 Rasd1 protein_coding protein_coding MGP_129S1SvImJ_T0100521.1 MGP_129S1SvImJ_G0038588.1 mouse_genomes_project 11 79162928 79162993 - Snord42a snoRNA snoRNA MGP_129S1SvImJ_T0029741.1 MGP_129S1SvImJ_G0018478.1 mouse_genomes_project 11 66026102 66048211 + MGP_129S1SvImJ_P0029741 Zkscan6 protein_coding protein_coding MGP_129S1SvImJ_T0029742.1 MGP_129S1SvImJ_G0018478.1 mouse_genomes_project 11 66026171 66048212 + MGP_129S1SvImJ_P0029742 Zkscan6 protein_coding protein_coding MGP_129S1SvImJ_T0029621.1 MGP_129S1SvImJ_G0018451.1 mouse_genomes_project 11 62285402 62299495 - MGP_129S1SvImJ_P0029621 Zswim7 protein_coding protein_coding MGP_129S1SvImJ_T0009663.1 MGP_129S1SvImJ_G0007779.1 mouse_genomes_project 11 3515185 3515249 + Mir7651 miRNA miRNA MGP_129S1SvImJ_T0027932.1 MGP_129S1SvImJ_G0018009.1 mouse_genomes_project 11 2947730 2957871 + MGP_129S1SvImJ_P0027932 Aebp1 protein_coding protein_coding MGP_129S1SvImJ_T0027933.1 MGP_129S1SvImJ_G0018009.1 mouse_genomes_project 11 2953384 2957871 + MGP_129S1SvImJ_P0027933 Aebp1 protein_coding protein_coding MGP_129S1SvImJ_T0027934.1 MGP_129S1SvImJ_G0018009.1 mouse_genomes_project 11 2954930 2955924 + Aebp1 protein_coding processed_transcript MGP_129S1SvImJ_T0030294.1 MGP_129S1SvImJ_G0018602.1 mouse_genomes_project 11 71078274 71079395 + MGP_129S1SvImJ_P0030294 Pld2 protein_coding protein_coding MGP_129S1SvImJ_T0030295.1 MGP_129S1SvImJ_G0018602.1 mouse_genomes_project 11 71078516 71097349 + MGP_129S1SvImJ_P0030295 Pld2 protein_coding protein_coding MGP_129S1SvImJ_T0030296.1 MGP_129S1SvImJ_G0018602.1 mouse_genomes_project 11 71078553 71097349 + MGP_129S1SvImJ_P0030296 Pld2 protein_coding protein_coding MGP_129S1SvImJ_T0030297.1 MGP_129S1SvImJ_G0018602.1 mouse_genomes_project 11 71078566 71084604 + MGP_129S1SvImJ_P0030297 Pld2 protein_coding protein_coding MGP_129S1SvImJ_T0030298.1 MGP_129S1SvImJ_G0018602.1 mouse_genomes_project 11 71093351 71096342 + Pld2 protein_coding retained_intron MGP_129S1SvImJ_T0030299.1 MGP_129S1SvImJ_G0018602.1 mouse_genomes_project 11 71094880 71096466 + MGP_129S1SvImJ_P0030299 Pld2 protein_coding protein_coding MGP_129S1SvImJ_T0030300.1 MGP_129S1SvImJ_G0018602.1 mouse_genomes_project 11 71095045 71096716 + Pld2 protein_coding retained_intron MGP_129S1SvImJ_T0102149.1 MGP_129S1SvImJ_G0039984.1 mouse_genomes_project 11 85062265 85063142 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099280.1 MGP_129S1SvImJ_G0037347.1 mouse_genomes_project 11 100971951 100972042 - Gm25048 snRNA snRNA MGP_129S1SvImJ_T0099234.1 MGP_129S1SvImJ_G0037301.1 mouse_genomes_project 11 35169657 35169763 + Gm22127 snRNA snRNA MGP_129S1SvImJ_T0031256.1 MGP_129S1SvImJ_G0018841.1 mouse_genomes_project 11 84486402 84504060 + MGP_129S1SvImJ_P0031256 Slfn4 protein_coding protein_coding MGP_129S1SvImJ_T0031257.1 MGP_129S1SvImJ_G0018841.1 mouse_genomes_project 11 84486410 84503888 + MGP_129S1SvImJ_P0031257 Slfn4 protein_coding protein_coding MGP_129S1SvImJ_T0030551.1 MGP_129S1SvImJ_G0018655.1 mouse_genomes_project 11 73856055 73862356 + MGP_129S1SvImJ_P0030551 Tax1bp3 protein_coding protein_coding MGP_129S1SvImJ_T0030552.1 MGP_129S1SvImJ_G0018655.1 mouse_genomes_project 11 73856223 73859658 + Tax1bp3 protein_coding processed_transcript MGP_129S1SvImJ_T0030553.1 MGP_129S1SvImJ_G0018655.1 mouse_genomes_project 11 73856223 73864525 + Tax1bp3 protein_coding retained_intron MGP_129S1SvImJ_T0030554.1 MGP_129S1SvImJ_G0018655.1 mouse_genomes_project 11 73856242 73862251 + MGP_129S1SvImJ_P0030554 Tax1bp3 protein_coding protein_coding MGP_129S1SvImJ_T0011334.1 MGP_129S1SvImJ_G0009450.1 mouse_genomes_project 11 105436075 105436326 - Gm23563 misc_RNA misc_RNA MGP_129S1SvImJ_T0033521.1 MGP_129S1SvImJ_G0019399.1 mouse_genomes_project 11 119829139 119866033 + MGP_129S1SvImJ_P0033521 Tmem94 protein_coding protein_coding MGP_129S1SvImJ_T0033522.1 MGP_129S1SvImJ_G0019399.1 mouse_genomes_project 11 119829148 119850843 + MGP_129S1SvImJ_P0033522 Tmem94 protein_coding protein_coding MGP_129S1SvImJ_T0033523.1 MGP_129S1SvImJ_G0019399.1 mouse_genomes_project 11 119829149 119851167 + MGP_129S1SvImJ_P0033523 Tmem94 protein_coding protein_coding MGP_129S1SvImJ_T0033524.1 MGP_129S1SvImJ_G0019399.1 mouse_genomes_project 11 119829160 119851086 + MGP_129S1SvImJ_P0033524 Tmem94 protein_coding protein_coding MGP_129S1SvImJ_T0033525.1 MGP_129S1SvImJ_G0019399.1 mouse_genomes_project 11 119830427 119840902 + Tmem94 protein_coding processed_transcript MGP_129S1SvImJ_T0033526.1 MGP_129S1SvImJ_G0019399.1 mouse_genomes_project 11 119839292 119865700 + MGP_129S1SvImJ_P0033526 Tmem94 protein_coding protein_coding MGP_129S1SvImJ_T0033527.1 MGP_129S1SvImJ_G0019399.1 mouse_genomes_project 11 119853900 119858645 + MGP_129S1SvImJ_P0033527 Tmem94 protein_coding protein_coding MGP_129S1SvImJ_T0033030.1 MGP_129S1SvImJ_G0019292.1 mouse_genomes_project 11 109337851 109345477 + MGP_129S1SvImJ_P0033030 Taco1 protein_coding protein_coding MGP_129S1SvImJ_T0033470.1 MGP_129S1SvImJ_G0019392.1 mouse_genomes_project 11 119555485 119568230 - MGP_129S1SvImJ_P0033470 Sumo2 protein_coding protein_coding MGP_129S1SvImJ_T0033471.1 MGP_129S1SvImJ_G0019392.1 mouse_genomes_project 11 119561935 119568130 - Sumo2 protein_coding retained_intron MGP_129S1SvImJ_T0033472.1 MGP_129S1SvImJ_G0019392.1 mouse_genomes_project 11 119566331 119568143 - Sumo2 protein_coding retained_intron MGP_129S1SvImJ_T0029809.1 MGP_129S1SvImJ_G0018497.1 mouse_genomes_project 11 68242802 68266406 - Cfap52 protein_coding processed_transcript MGP_129S1SvImJ_T0029810.1 MGP_129S1SvImJ_G0018497.1 mouse_genomes_project 11 68242804 68288691 - MGP_129S1SvImJ_P0029810 Cfap52 protein_coding protein_coding MGP_129S1SvImJ_T0029811.1 MGP_129S1SvImJ_G0018497.1 mouse_genomes_project 11 68242947 68251800 - Cfap52 protein_coding processed_transcript MGP_129S1SvImJ_T0029812.1 MGP_129S1SvImJ_G0018497.1 mouse_genomes_project 11 68259745 68288700 - MGP_129S1SvImJ_P0029812 Cfap52 protein_coding protein_coding MGP_129S1SvImJ_T0003303.1 MGP_129S1SvImJ_G0003053.1 mouse_genomes_project 11 100986616 100987626 + Gm12352 antisense antisense MGP_129S1SvImJ_T0028970.1 MGP_129S1SvImJ_G0018277.1 mouse_genomes_project 11 51086429 51123877 - MGP_129S1SvImJ_P0028970 Jade2 protein_coding protein_coding MGP_129S1SvImJ_T0028971.1 MGP_129S1SvImJ_G0018277.1 mouse_genomes_project 11 51117128 51134019 - Jade2 protein_coding processed_transcript MGP_129S1SvImJ_T0030322.1 MGP_129S1SvImJ_G0018606.1 mouse_genomes_project 11 71182311 71185226 + MGP_129S1SvImJ_P0030322 Gp1ba protein_coding protein_coding MGP_129S1SvImJ_T0030323.1 MGP_129S1SvImJ_G0018606.1 mouse_genomes_project 11 71182333 71185010 + MGP_129S1SvImJ_P0030323 Gp1ba protein_coding protein_coding MGP_129S1SvImJ_T0099250.1 MGP_129S1SvImJ_G0037317.1 mouse_genomes_project 11 69480830 69480931 + Gm25371 snRNA snRNA MGP_129S1SvImJ_T0033799.1 MGP_129S1SvImJ_G0019448.1 mouse_genomes_project 11 121922429 122042981 + MGP_129S1SvImJ_P0033799 Tnrc6c protein_coding protein_coding MGP_129S1SvImJ_T0033800.1 MGP_129S1SvImJ_G0019448.1 mouse_genomes_project 11 121922713 122042972 + Tnrc6c protein_coding retained_intron MGP_129S1SvImJ_T0033801.1 MGP_129S1SvImJ_G0019448.1 mouse_genomes_project 11 121922953 122042983 + MGP_129S1SvImJ_P0033801 Tnrc6c protein_coding protein_coding MGP_129S1SvImJ_T0033802.1 MGP_129S1SvImJ_G0019448.1 mouse_genomes_project 11 121999823 122041813 + MGP_129S1SvImJ_P0033802 Tnrc6c protein_coding protein_coding MGP_129S1SvImJ_T0033803.1 MGP_129S1SvImJ_G0019448.1 mouse_genomes_project 11 122022036 122028851 + Tnrc6c protein_coding retained_intron MGP_129S1SvImJ_T0033804.1 MGP_129S1SvImJ_G0019448.1 mouse_genomes_project 11 122028780 122030858 + Tnrc6c protein_coding retained_intron MGP_129S1SvImJ_T0100541.1 MGP_129S1SvImJ_G0038608.1 mouse_genomes_project 11 119790272 119790407 + Gm23699 snoRNA snoRNA MGP_129S1SvImJ_T0032276.1 MGP_129S1SvImJ_G0019106.1 mouse_genomes_project 11 102309241 102310256 - MGP_129S1SvImJ_P0032276 Krtap4-1 protein_coding protein_coding MGP_129S1SvImJ_T0028166.1 MGP_129S1SvImJ_G0018065.1 mouse_genomes_project 11 17727635 17755370 - MGP_129S1SvImJ_P0028166 Cep68 protein_coding protein_coding MGP_129S1SvImJ_T0028167.1 MGP_129S1SvImJ_G0018065.1 mouse_genomes_project 11 17741381 17755370 - MGP_129S1SvImJ_P0028167 Cep68 protein_coding protein_coding MGP_129S1SvImJ_T0028168.1 MGP_129S1SvImJ_G0018065.1 mouse_genomes_project 11 17741382 17755381 - MGP_129S1SvImJ_P0028168 Cep68 protein_coding protein_coding MGP_129S1SvImJ_T0028169.1 MGP_129S1SvImJ_G0018065.1 mouse_genomes_project 11 17746173 17755335 - Cep68 protein_coding retained_intron MGP_129S1SvImJ_T0032304.1 MGP_129S1SvImJ_G0019134.1 mouse_genomes_project 11 102747116 102761450 - MGP_129S1SvImJ_P0032304 Krt33a protein_coding protein_coding MGP_129S1SvImJ_T0029326.1 MGP_129S1SvImJ_G0018388.1 mouse_genomes_project 11 58961812 58970170 - MGP_129S1SvImJ_P0029326 Iba57 protein_coding protein_coding MGP_129S1SvImJ_T0029327.1 MGP_129S1SvImJ_G0018388.1 mouse_genomes_project 11 58967551 58969748 - MGP_129S1SvImJ_P0029327 Iba57 protein_coding protein_coding MGP_129S1SvImJ_T0029328.1 MGP_129S1SvImJ_G0018388.1 mouse_genomes_project 11 58967783 58970131 - MGP_129S1SvImJ_P0029328 Iba57 protein_coding protein_coding MGP_129S1SvImJ_T0012628.1 MGP_129S1SvImJ_G0010717.1 mouse_genomes_project 11 54995645 54995815 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003133.1 MGP_129S1SvImJ_G0002915.1 mouse_genomes_project 11 2554248 2560946 + Gm11963 antisense antisense MGP_129S1SvImJ_T0009693.1 MGP_129S1SvImJ_G0007809.1 mouse_genomes_project 11 54133026 54133103 - Gm26116 miRNA miRNA MGP_129S1SvImJ_T0030555.1 MGP_129S1SvImJ_G0018656.1 mouse_genomes_project 11 73864958 73880285 - MGP_129S1SvImJ_P0030555 Ctns protein_coding protein_coding MGP_129S1SvImJ_T0030556.1 MGP_129S1SvImJ_G0018656.1 mouse_genomes_project 11 73864959 73880285 - MGP_129S1SvImJ_P0030556 Ctns protein_coding protein_coding MGP_129S1SvImJ_T0030557.1 MGP_129S1SvImJ_G0018656.1 mouse_genomes_project 11 73867714 73870169 - Ctns protein_coding retained_intron MGP_129S1SvImJ_T0030558.1 MGP_129S1SvImJ_G0018656.1 mouse_genomes_project 11 73872674 73880264 - Ctns protein_coding retained_intron MGP_129S1SvImJ_T0030559.1 MGP_129S1SvImJ_G0018656.1 mouse_genomes_project 11 73873076 73880238 - Ctns protein_coding processed_transcript MGP_129S1SvImJ_T0031260.1 MGP_129S1SvImJ_G0018844.1 mouse_genomes_project 11 84614258 84618593 - MGP_129S1SvImJ_P0031260 Pex12 protein_coding protein_coding MGP_129S1SvImJ_T0031261.1 MGP_129S1SvImJ_G0018844.1 mouse_genomes_project 11 84614691 84618511 - MGP_129S1SvImJ_P0031261 Pex12 protein_coding protein_coding MGP_129S1SvImJ_T0031262.1 MGP_129S1SvImJ_G0018844.1 mouse_genomes_project 11 84614691 84618558 - MGP_129S1SvImJ_P0031262 Pex12 protein_coding protein_coding MGP_129S1SvImJ_T0031263.1 MGP_129S1SvImJ_G0018844.1 mouse_genomes_project 11 84614692 84618513 - MGP_129S1SvImJ_P0031263 Pex12 protein_coding protein_coding MGP_129S1SvImJ_T0031264.1 MGP_129S1SvImJ_G0018844.1 mouse_genomes_project 11 84617519 84618554 - Pex12 protein_coding processed_transcript MGP_129S1SvImJ_T0031265.1 MGP_129S1SvImJ_G0018844.1 mouse_genomes_project 11 84617645 84622199 - MGP_129S1SvImJ_P0031265 Pex12 protein_coding protein_coding MGP_129S1SvImJ_T0031266.1 MGP_129S1SvImJ_G0018844.1 mouse_genomes_project 11 84617944 84618574 - MGP_129S1SvImJ_P0031266 Pex12 protein_coding protein_coding MGP_129S1SvImJ_T0003291.1 MGP_129S1SvImJ_G0003043.1 mouse_genomes_project 11 98275186 98277346 + Gm29202 antisense antisense MGP_129S1SvImJ_T0029262.1 MGP_129S1SvImJ_G0018353.1 mouse_genomes_project 11 58165339 58174386 + MGP_129S1SvImJ_P0029262 Gm12253 protein_coding protein_coding MGP_129S1SvImJ_T0029680.1 MGP_129S1SvImJ_G0018461.1 mouse_genomes_project 11 62822564 62822963 + MGP_129S1SvImJ_P0029680 Gm10428 protein_coding protein_coding MGP_129S1SvImJ_T0030439.1 MGP_129S1SvImJ_G0018625.1 mouse_genomes_project 11 71718319 71837153 - MGP_129S1SvImJ_P0030439 Nlrp1b protein_coding protein_coding MGP_129S1SvImJ_T0030440.1 MGP_129S1SvImJ_G0018625.1 mouse_genomes_project 11 71721194 71837000 - MGP_129S1SvImJ_P0030440 Nlrp1b protein_coding protein_coding MGP_129S1SvImJ_T0030290.1 MGP_129S1SvImJ_G0018601.1 mouse_genomes_project 11 71061489 71062546 + Psmb6 protein_coding retained_intron MGP_129S1SvImJ_T0030291.1 MGP_129S1SvImJ_G0018601.1 mouse_genomes_project 11 71061508 71063771 + MGP_129S1SvImJ_P0030291 Psmb6 protein_coding protein_coding MGP_129S1SvImJ_T0030292.1 MGP_129S1SvImJ_G0018601.1 mouse_genomes_project 11 71062231 71063315 + Psmb6 protein_coding retained_intron MGP_129S1SvImJ_T0030293.1 MGP_129S1SvImJ_G0018601.1 mouse_genomes_project 11 71063193 71063980 + Psmb6 protein_coding retained_intron MGP_129S1SvImJ_T0006364.1 MGP_129S1SvImJ_G0005307.1 mouse_genomes_project 11 114183980 114185767 + Gm11682 lincRNA lincRNA MGP_129S1SvImJ_T0031318.1 MGP_129S1SvImJ_G0018864.1 mouse_genomes_project 11 85356556 85441031 + MGP_129S1SvImJ_P0031318 Synrg protein_coding protein_coding MGP_129S1SvImJ_T0031319.1 MGP_129S1SvImJ_G0018864.1 mouse_genomes_project 11 85356556 85435674 + MGP_129S1SvImJ_P0031319 Synrg protein_coding protein_coding MGP_129S1SvImJ_T0031320.1 MGP_129S1SvImJ_G0018864.1 mouse_genomes_project 11 85356604 85435648 + MGP_129S1SvImJ_P0031320 Synrg protein_coding protein_coding MGP_129S1SvImJ_T0031321.1 MGP_129S1SvImJ_G0018864.1 mouse_genomes_project 11 85356604 85435648 + MGP_129S1SvImJ_P0031321 Synrg protein_coding protein_coding MGP_129S1SvImJ_T0031322.1 MGP_129S1SvImJ_G0018864.1 mouse_genomes_project 11 85375317 85383686 + Synrg protein_coding processed_transcript MGP_129S1SvImJ_T0031323.1 MGP_129S1SvImJ_G0018864.1 mouse_genomes_project 11 85376158 85384746 + MGP_129S1SvImJ_P0031323 Synrg protein_coding protein_coding MGP_129S1SvImJ_T0031324.1 MGP_129S1SvImJ_G0018864.1 mouse_genomes_project 11 85383685 85385162 + Synrg protein_coding retained_intron MGP_129S1SvImJ_T0031325.1 MGP_129S1SvImJ_G0018864.1 mouse_genomes_project 11 85413025 85436131 + Synrg protein_coding retained_intron MGP_129S1SvImJ_T0031326.1 MGP_129S1SvImJ_G0018864.1 mouse_genomes_project 11 85420303 85434730 + Synrg protein_coding retained_intron MGP_129S1SvImJ_T0029184.1 MGP_129S1SvImJ_G0018328.1 mouse_genomes_project 11 54718143 54750591 + MGP_129S1SvImJ_P0029184 Slc36a1 protein_coding protein_coding MGP_129S1SvImJ_T0029185.1 MGP_129S1SvImJ_G0018328.1 mouse_genomes_project 11 54718155 54728078 + Slc36a1 protein_coding processed_transcript MGP_129S1SvImJ_T0029186.1 MGP_129S1SvImJ_G0018328.1 mouse_genomes_project 11 54718167 54735884 + MGP_129S1SvImJ_P0029186 Slc36a1 protein_coding protein_coding MGP_129S1SvImJ_T0029187.1 MGP_129S1SvImJ_G0018328.1 mouse_genomes_project 11 54718169 54748106 + MGP_129S1SvImJ_P0029187 Slc36a1 protein_coding protein_coding MGP_129S1SvImJ_T0029188.1 MGP_129S1SvImJ_G0018328.1 mouse_genomes_project 11 54727610 54746552 + MGP_129S1SvImJ_P0029188 Slc36a1 protein_coding protein_coding MGP_129S1SvImJ_T0029296.1 MGP_129S1SvImJ_G0018375.1 mouse_genomes_project 11 58558097 58567186 - MGP_129S1SvImJ_P0029296 Fam183b protein_coding protein_coding MGP_129S1SvImJ_T0029297.1 MGP_129S1SvImJ_G0018375.1 mouse_genomes_project 11 58558111 58567186 - MGP_129S1SvImJ_P0029297 Fam183b protein_coding protein_coding MGP_129S1SvImJ_T0029294.1 MGP_129S1SvImJ_G0018374.1 mouse_genomes_project 11 58548325 58552396 + MGP_129S1SvImJ_P0029294 Olfr314 protein_coding protein_coding MGP_129S1SvImJ_T0029295.1 MGP_129S1SvImJ_G0018374.1 mouse_genomes_project 11 58551514 58552645 + MGP_129S1SvImJ_P0029295 Olfr314 protein_coding protein_coding MGP_129S1SvImJ_T0003148.1 MGP_129S1SvImJ_G0002925.1 mouse_genomes_project 11 16431141 16433192 + Gm16140 antisense antisense MGP_129S1SvImJ_T0003149.1 MGP_129S1SvImJ_G0002925.1 mouse_genomes_project 11 16431143 16432799 + Gm16140 antisense antisense MGP_129S1SvImJ_T0012679.1 MGP_129S1SvImJ_G0010768.1 mouse_genomes_project 11 73488656 73490629 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0030895.1 MGP_129S1SvImJ_G0018751.1 mouse_genomes_project 11 78426330 78431116 - MGP_129S1SvImJ_P0030895 Gm10392 protein_coding protein_coding MGP_129S1SvImJ_T0009717.1 MGP_129S1SvImJ_G0007833.1 mouse_genomes_project 11 71256735 71256805 + Mir6925 miRNA miRNA MGP_129S1SvImJ_T0028088.1 MGP_129S1SvImJ_G0018047.1 mouse_genomes_project 11 9110351 9197667 - MGP_129S1SvImJ_P0028088 Ddc protein_coding protein_coding MGP_129S1SvImJ_T0028089.1 MGP_129S1SvImJ_G0018047.1 mouse_genomes_project 11 9110351 9197567 - MGP_129S1SvImJ_P0028089 Ddc protein_coding protein_coding MGP_129S1SvImJ_T0028090.1 MGP_129S1SvImJ_G0018047.1 mouse_genomes_project 11 9110353 9121238 - Ddc protein_coding processed_transcript MGP_129S1SvImJ_T0028091.1 MGP_129S1SvImJ_G0018047.1 mouse_genomes_project 11 9110353 9189324 - MGP_129S1SvImJ_P0028091 Ddc protein_coding protein_coding MGP_129S1SvImJ_T0028092.1 MGP_129S1SvImJ_G0018047.1 mouse_genomes_project 11 9115600 9135637 - Ddc protein_coding processed_transcript MGP_129S1SvImJ_T0028093.1 MGP_129S1SvImJ_G0018047.1 mouse_genomes_project 11 9144333 9164107 - Ddc protein_coding processed_transcript MGP_129S1SvImJ_T0028094.1 MGP_129S1SvImJ_G0018047.1 mouse_genomes_project 11 9146008 9189285 - MGP_129S1SvImJ_P0028094 Ddc protein_coding protein_coding MGP_129S1SvImJ_T0028095.1 MGP_129S1SvImJ_G0018047.1 mouse_genomes_project 11 9161053 9189317 - Ddc protein_coding processed_transcript MGP_129S1SvImJ_T0028096.1 MGP_129S1SvImJ_G0018047.1 mouse_genomes_project 11 9172432 9179554 - Ddc protein_coding processed_transcript MGP_129S1SvImJ_T0028097.1 MGP_129S1SvImJ_G0018047.1 mouse_genomes_project 11 9174372 9189314 - Ddc protein_coding processed_transcript MGP_129S1SvImJ_T0006376.1 MGP_129S1SvImJ_G0005315.1 mouse_genomes_project 11 118075154 118102912 - Gm11690 lincRNA lincRNA MGP_129S1SvImJ_T0009715.1 MGP_129S1SvImJ_G0007831.1 mouse_genomes_project 11 70755581 70755675 + Mir195a miRNA miRNA MGP_129S1SvImJ_T0003150.1 MGP_129S1SvImJ_G0002926.1 mouse_genomes_project 11 16435835 16437163 + Gm16141 antisense antisense MGP_129S1SvImJ_T0033814.1 MGP_129S1SvImJ_G0019450.1 mouse_genomes_project 11 122063018 122065092 + MGP_129S1SvImJ_P0033814 Tmc8 protein_coding protein_coding MGP_129S1SvImJ_T0033815.1 MGP_129S1SvImJ_G0019450.1 mouse_genomes_project 11 122063239 122074026 + MGP_129S1SvImJ_P0033815 Tmc8 protein_coding protein_coding MGP_129S1SvImJ_T0033816.1 MGP_129S1SvImJ_G0019450.1 mouse_genomes_project 11 122063257 122074108 + MGP_129S1SvImJ_P0033816 Tmc8 protein_coding protein_coding MGP_129S1SvImJ_T0033817.1 MGP_129S1SvImJ_G0019450.1 mouse_genomes_project 11 122063327 122073850 + MGP_129S1SvImJ_P0033817 Tmc8 protein_coding protein_coding MGP_129S1SvImJ_T0033818.1 MGP_129S1SvImJ_G0019450.1 mouse_genomes_project 11 122063599 122074081 + MGP_129S1SvImJ_P0033818 Tmc8 protein_coding protein_coding MGP_129S1SvImJ_T0033819.1 MGP_129S1SvImJ_G0019450.1 mouse_genomes_project 11 122072154 122073580 + Tmc8 protein_coding retained_intron MGP_129S1SvImJ_T0003373.1 MGP_129S1SvImJ_G0003108.1 mouse_genomes_project 11 122070863 122072280 - Gm11724 antisense antisense MGP_129S1SvImJ_T0012701.1 MGP_129S1SvImJ_G0010790.1 mouse_genomes_project 11 80464666 80467094 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003300.1 MGP_129S1SvImJ_G0003050.1 mouse_genomes_project 11 99681152 99684310 + Gm11592 antisense antisense MGP_129S1SvImJ_T0003240.1 MGP_129S1SvImJ_G0003004.1 mouse_genomes_project 11 69882404 69887533 + Dnah2os antisense antisense MGP_129S1SvImJ_T0030836.1 MGP_129S1SvImJ_G0018739.1 mouse_genomes_project 11 77635836 77700299 - MGP_129S1SvImJ_P0030836 Cpd protein_coding protein_coding MGP_129S1SvImJ_T0030837.1 MGP_129S1SvImJ_G0018739.1 mouse_genomes_project 11 77644828 77649706 - Cpd protein_coding retained_intron MGP_129S1SvImJ_T0030838.1 MGP_129S1SvImJ_G0018739.1 mouse_genomes_project 11 77664382 77667497 - Cpd protein_coding retained_intron MGP_129S1SvImJ_T0033780.1 MGP_129S1SvImJ_G0019444.1 mouse_genomes_project 11 121089956 121160395 + MGP_129S1SvImJ_P0033780 Mgat5b protein_coding protein_coding MGP_129S1SvImJ_T0033781.1 MGP_129S1SvImJ_G0019444.1 mouse_genomes_project 11 121120877 121147750 + Mgat5b protein_coding processed_transcript MGP_129S1SvImJ_T0033782.1 MGP_129S1SvImJ_G0019444.1 mouse_genomes_project 11 121140327 121151836 + MGP_129S1SvImJ_P0033782 Mgat5b protein_coding protein_coding MGP_129S1SvImJ_T0033783.1 MGP_129S1SvImJ_G0019444.1 mouse_genomes_project 11 121146515 121160387 + Mgat5b protein_coding retained_intron MGP_129S1SvImJ_T0033979.1 MGP_129S1SvImJ_G0019486.1 mouse_genomes_project 11 124335823 124338088 + MGP_129S1SvImJ_P0033979 Chmp6 protein_coding protein_coding MGP_129S1SvImJ_T0033980.1 MGP_129S1SvImJ_G0019486.1 mouse_genomes_project 11 124335868 124341532 + MGP_129S1SvImJ_P0033980 Chmp6 protein_coding protein_coding MGP_129S1SvImJ_T0033981.1 MGP_129S1SvImJ_G0019486.1 mouse_genomes_project 11 124337815 124341042 + Chmp6 protein_coding retained_intron MGP_129S1SvImJ_T0033982.1 MGP_129S1SvImJ_G0019486.1 mouse_genomes_project 11 124338724 124340622 + Chmp6 protein_coding retained_intron MGP_129S1SvImJ_T0030059.1 MGP_129S1SvImJ_G0018552.1 mouse_genomes_project 11 70235983 70238062 - MGP_129S1SvImJ_P0030059 Slc35g3 protein_coding protein_coding MGP_129S1SvImJ_T0009710.1 MGP_129S1SvImJ_G0007826.1 mouse_genomes_project 11 70366580 70366643 - Mir6924 miRNA miRNA MGP_129S1SvImJ_T0028945.1 MGP_129S1SvImJ_G0018269.1 mouse_genomes_project 11 50847670 50854415 - MGP_129S1SvImJ_P0028945 Hnrnpab protein_coding protein_coding MGP_129S1SvImJ_T0028946.1 MGP_129S1SvImJ_G0018269.1 mouse_genomes_project 11 50848439 50854415 - MGP_129S1SvImJ_P0028946 Hnrnpab protein_coding protein_coding MGP_129S1SvImJ_T0028947.1 MGP_129S1SvImJ_G0018269.1 mouse_genomes_project 11 50848744 50854415 - MGP_129S1SvImJ_P0028947 Hnrnpab protein_coding protein_coding MGP_129S1SvImJ_T0030594.1 MGP_129S1SvImJ_G0018674.1 mouse_genomes_project 11 74496353 74500690 - MGP_129S1SvImJ_P0030594 Olfr391-ps protein_coding protein_coding MGP_129S1SvImJ_T0033034.1 MGP_129S1SvImJ_G0019294.1 mouse_genomes_project 11 109436213 109440100 - MGP_129S1SvImJ_P0033034 Limd2 protein_coding protein_coding MGP_129S1SvImJ_T0033035.1 MGP_129S1SvImJ_G0019294.1 mouse_genomes_project 11 109438271 109439367 - Limd2 protein_coding processed_transcript MGP_129S1SvImJ_T0033036.1 MGP_129S1SvImJ_G0019294.1 mouse_genomes_project 11 109438388 109439885 - MGP_129S1SvImJ_P0033036 Limd2 protein_coding protein_coding MGP_129S1SvImJ_T0033037.1 MGP_129S1SvImJ_G0019294.1 mouse_genomes_project 11 109438608 109440766 - MGP_129S1SvImJ_P0033037 Limd2 protein_coding protein_coding MGP_129S1SvImJ_T0012561.1 MGP_129S1SvImJ_G0010650.1 mouse_genomes_project 11 28024161 28024977 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0030598.1 MGP_129S1SvImJ_G0018677.1 mouse_genomes_project 11 74574652 74575585 - MGP_129S1SvImJ_P0030598 Olfr394 protein_coding protein_coding MGP_129S1SvImJ_T0034129.1 MGP_129S1SvImJ_G0019516.1 mouse_genomes_project 11 125098428 125105027 - Sirt7 protein_coding retained_intron MGP_129S1SvImJ_T0034130.1 MGP_129S1SvImJ_G0019516.1 mouse_genomes_project 11 125098428 125105298 - Sirt7 protein_coding retained_intron MGP_129S1SvImJ_T0034131.1 MGP_129S1SvImJ_G0019516.1 mouse_genomes_project 11 125098428 125105072 - MGP_129S1SvImJ_P0034131 Sirt7 protein_coding protein_coding MGP_129S1SvImJ_T0034132.1 MGP_129S1SvImJ_G0019516.1 mouse_genomes_project 11 125098430 125105057 - Sirt7 protein_coding retained_intron MGP_129S1SvImJ_T0034133.1 MGP_129S1SvImJ_G0019516.1 mouse_genomes_project 11 125098444 125105078 - Sirt7 protein_coding retained_intron MGP_129S1SvImJ_T0034134.1 MGP_129S1SvImJ_G0019516.1 mouse_genomes_project 11 125098476 125101035 - MGP_129S1SvImJ_P0034134 Sirt7 protein_coding protein_coding MGP_129S1SvImJ_T0034135.1 MGP_129S1SvImJ_G0019516.1 mouse_genomes_project 11 125098825 125099426 - Sirt7 protein_coding processed_transcript MGP_129S1SvImJ_T0034136.1 MGP_129S1SvImJ_G0019516.1 mouse_genomes_project 11 125101056 125105048 - Sirt7 protein_coding processed_transcript MGP_129S1SvImJ_T0034137.1 MGP_129S1SvImJ_G0019516.1 mouse_genomes_project 11 125102047 125102860 - Sirt7 protein_coding retained_intron MGP_129S1SvImJ_T0034138.1 MGP_129S1SvImJ_G0019516.1 mouse_genomes_project 11 125103337 125105050 - Sirt7 protein_coding retained_intron MGP_129S1SvImJ_T0034139.1 MGP_129S1SvImJ_G0019516.1 mouse_genomes_project 11 125104047 125105042 - MGP_129S1SvImJ_P0034139 Sirt7 protein_coding protein_coding MGP_129S1SvImJ_T0028856.1 MGP_129S1SvImJ_G0018246.1 mouse_genomes_project 11 49429394 49465510 - MGP_129S1SvImJ_P0028856 Maml1 protein_coding protein_coding MGP_129S1SvImJ_T0028857.1 MGP_129S1SvImJ_G0018246.1 mouse_genomes_project 11 49429394 49466017 - MGP_129S1SvImJ_P0028857 Maml1 protein_coding protein_coding MGP_129S1SvImJ_T0102001.1 MGP_129S1SvImJ_G0039861.1 mouse_genomes_project 11 105750594 105770601 + unitary_pseudogene unitary_pseudogene MGP_129S1SvImJ_T0012763.1 MGP_129S1SvImJ_G0010852.1 mouse_genomes_project 11 107653401 107653813 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033412.1 MGP_129S1SvImJ_G0019381.1 mouse_genomes_project 11 119352704 119365804 + MGP_129S1SvImJ_P0033412 Otop3 protein_coding protein_coding MGP_129S1SvImJ_T0033413.1 MGP_129S1SvImJ_G0019381.1 mouse_genomes_project 11 119352707 119365803 + MGP_129S1SvImJ_P0033413 Otop3 protein_coding protein_coding MGP_129S1SvImJ_T0027870.1 MGP_129S1SvImJ_G0017996.1 mouse_genomes_project 11 2089779 2122264 - MGP_129S1SvImJ_P0027870 Ewsr1 protein_coding protein_coding MGP_129S1SvImJ_T0027871.1 MGP_129S1SvImJ_G0017996.1 mouse_genomes_project 11 2089788 2122065 - MGP_129S1SvImJ_P0027871 Ewsr1 protein_coding protein_coding MGP_129S1SvImJ_T0027872.1 MGP_129S1SvImJ_G0017996.1 mouse_genomes_project 11 2089986 2122040 - MGP_129S1SvImJ_P0027872 Ewsr1 protein_coding protein_coding MGP_129S1SvImJ_T0027873.1 MGP_129S1SvImJ_G0017996.1 mouse_genomes_project 11 2090063 2090981 - Ewsr1 protein_coding processed_transcript MGP_129S1SvImJ_T0027874.1 MGP_129S1SvImJ_G0017996.1 mouse_genomes_project 11 2091063 2101077 - Ewsr1 protein_coding processed_transcript MGP_129S1SvImJ_T0027875.1 MGP_129S1SvImJ_G0017996.1 mouse_genomes_project 11 2091373 2100076 - Ewsr1 protein_coding processed_transcript MGP_129S1SvImJ_T0027876.1 MGP_129S1SvImJ_G0017996.1 mouse_genomes_project 11 2091476 2101448 - Ewsr1 protein_coding processed_transcript MGP_129S1SvImJ_T0027877.1 MGP_129S1SvImJ_G0017996.1 mouse_genomes_project 11 2091476 2103889 - Ewsr1 protein_coding processed_transcript MGP_129S1SvImJ_T0027878.1 MGP_129S1SvImJ_G0017996.1 mouse_genomes_project 11 2101966 2122064 - MGP_129S1SvImJ_P0027878 Ewsr1 protein_coding protein_coding MGP_129S1SvImJ_T0027879.1 MGP_129S1SvImJ_G0017996.1 mouse_genomes_project 11 2103570 2108821 - Ewsr1 protein_coding processed_transcript MGP_129S1SvImJ_T0027880.1 MGP_129S1SvImJ_G0017996.1 mouse_genomes_project 11 2113247 2122094 - MGP_129S1SvImJ_P0027880 Ewsr1 protein_coding protein_coding MGP_129S1SvImJ_T0027881.1 MGP_129S1SvImJ_G0017996.1 mouse_genomes_project 11 2116320 2122065 - Ewsr1 protein_coding processed_transcript MGP_129S1SvImJ_T0012660.1 MGP_129S1SvImJ_G0010749.1 mouse_genomes_project 11 65226691 65227181 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100530.1 MGP_129S1SvImJ_G0038597.1 mouse_genomes_project 11 98307948 98308163 + Gm24949 snoRNA snoRNA MGP_129S1SvImJ_T0031307.1 MGP_129S1SvImJ_G0018860.1 mouse_genomes_project 11 85127807 85133510 + MGP_129S1SvImJ_P0031307 Wfdc21 protein_coding protein_coding MGP_129S1SvImJ_T0034183.1 MGP_129S1SvImJ_G0019523.1 mouse_genomes_project 11 125198837 125206036 + MGP_129S1SvImJ_P0034183 Lrrc45 protein_coding protein_coding MGP_129S1SvImJ_T0034184.1 MGP_129S1SvImJ_G0019523.1 mouse_genomes_project 11 125198863 125206031 + MGP_129S1SvImJ_P0034184 Lrrc45 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034185.1 MGP_129S1SvImJ_G0019523.1 mouse_genomes_project 11 125198890 125200467 + MGP_129S1SvImJ_P0034185 Lrrc45 protein_coding protein_coding MGP_129S1SvImJ_T0034186.1 MGP_129S1SvImJ_G0019523.1 mouse_genomes_project 11 125202427 125204885 + Lrrc45 protein_coding retained_intron MGP_129S1SvImJ_T0034187.1 MGP_129S1SvImJ_G0019523.1 mouse_genomes_project 11 125204643 125205820 + Lrrc45 protein_coding retained_intron MGP_129S1SvImJ_T0030101.1 MGP_129S1SvImJ_G0018566.1 mouse_genomes_project 11 70383504 70387826 - MGP_129S1SvImJ_P0030101 2810408A11Rik protein_coding protein_coding MGP_129S1SvImJ_T0030102.1 MGP_129S1SvImJ_G0018566.1 mouse_genomes_project 11 70383510 70387818 - MGP_129S1SvImJ_P0030102 2810408A11Rik protein_coding protein_coding MGP_129S1SvImJ_T0030103.1 MGP_129S1SvImJ_G0018566.1 mouse_genomes_project 11 70383515 70387870 - MGP_129S1SvImJ_P0030103 2810408A11Rik protein_coding protein_coding MGP_129S1SvImJ_T0030104.1 MGP_129S1SvImJ_G0018566.1 mouse_genomes_project 11 70383515 70387907 - MGP_129S1SvImJ_P0030104 2810408A11Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030105.1 MGP_129S1SvImJ_G0018566.1 mouse_genomes_project 11 70383515 70387889 - MGP_129S1SvImJ_P0030105 2810408A11Rik protein_coding protein_coding MGP_129S1SvImJ_T0030106.1 MGP_129S1SvImJ_G0018566.1 mouse_genomes_project 11 70383618 70387919 - 2810408A11Rik protein_coding retained_intron MGP_129S1SvImJ_T0030107.1 MGP_129S1SvImJ_G0018566.1 mouse_genomes_project 11 70383618 70387889 - MGP_129S1SvImJ_P0030107 2810408A11Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030108.1 MGP_129S1SvImJ_G0018566.1 mouse_genomes_project 11 70384357 70385797 - 2810408A11Rik protein_coding retained_intron MGP_129S1SvImJ_T0030109.1 MGP_129S1SvImJ_G0018566.1 mouse_genomes_project 11 70385360 70387871 - MGP_129S1SvImJ_P0030109 2810408A11Rik protein_coding protein_coding MGP_129S1SvImJ_T0031251.1 MGP_129S1SvImJ_G0018837.1 mouse_genomes_project 11 84269364 84288079 - MGP_129S1SvImJ_P0031251 Slfn9 protein_coding protein_coding MGP_129S1SvImJ_T0032296.1 MGP_129S1SvImJ_G0019126.1 mouse_genomes_project 11 102587159 102588593 + MGP_129S1SvImJ_P0032296 Krtap9-1 protein_coding protein_coding MGP_129S1SvImJ_T0017267.1 MGP_129S1SvImJ_G0015195.1 mouse_genomes_project 11 96789774 96802541 + Gm11542 processed_transcript processed_transcript MGP_129S1SvImJ_T0030574.1 MGP_129S1SvImJ_G0018661.1 mouse_genomes_project 11 74015080 74037941 + MGP_129S1SvImJ_P0030574 Spata22 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0030575.1 MGP_129S1SvImJ_G0018661.1 mouse_genomes_project 11 74018148 74048611 + MGP_129S1SvImJ_P0030575 Spata22 protein_coding protein_coding MGP_129S1SvImJ_T0030258.1 MGP_129S1SvImJ_G0018592.1 mouse_genomes_project 11 70876160 70884024 - MGP_129S1SvImJ_P0030258 Alox15 protein_coding protein_coding MGP_129S1SvImJ_T0030259.1 MGP_129S1SvImJ_G0018592.1 mouse_genomes_project 11 70876613 70877705 - Alox15 protein_coding processed_transcript MGP_129S1SvImJ_T0012545.1 MGP_129S1SvImJ_G0010634.1 mouse_genomes_project 11 24591536 24592005 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033658.1 MGP_129S1SvImJ_G0019423.1 mouse_genomes_project 11 120392537 120412012 - Exoc7 protein_coding processed_transcript MGP_129S1SvImJ_T0033659.1 MGP_129S1SvImJ_G0019423.1 mouse_genomes_project 11 120392537 120412012 - MGP_129S1SvImJ_P0033659 Exoc7 protein_coding protein_coding MGP_129S1SvImJ_T0033660.1 MGP_129S1SvImJ_G0019423.1 mouse_genomes_project 11 120392537 120412012 - MGP_129S1SvImJ_P0033660 Exoc7 protein_coding protein_coding MGP_129S1SvImJ_T0033661.1 MGP_129S1SvImJ_G0019423.1 mouse_genomes_project 11 120392537 120412012 - MGP_129S1SvImJ_P0033661 Exoc7 protein_coding protein_coding MGP_129S1SvImJ_T0033662.1 MGP_129S1SvImJ_G0019423.1 mouse_genomes_project 11 120393599 120395013 - Exoc7 protein_coding processed_transcript MGP_129S1SvImJ_T0033663.1 MGP_129S1SvImJ_G0019423.1 mouse_genomes_project 11 120393645 120396003 - Exoc7 protein_coding processed_transcript MGP_129S1SvImJ_T0033664.1 MGP_129S1SvImJ_G0019423.1 mouse_genomes_project 11 120397104 120403052 - Exoc7 protein_coding processed_transcript MGP_129S1SvImJ_T0033665.1 MGP_129S1SvImJ_G0019423.1 mouse_genomes_project 11 120400965 120411930 - MGP_129S1SvImJ_P0033665 Exoc7 protein_coding protein_coding MGP_129S1SvImJ_T0033666.1 MGP_129S1SvImJ_G0019423.1 mouse_genomes_project 11 120409896 120412005 - MGP_129S1SvImJ_P0033666 Exoc7 protein_coding protein_coding MGP_129S1SvImJ_T0033667.1 MGP_129S1SvImJ_G0019423.1 mouse_genomes_project 11 120410315 120412510 - MGP_129S1SvImJ_P0033667 Exoc7 protein_coding protein_coding MGP_129S1SvImJ_T0033820.1 MGP_129S1SvImJ_G0019451.1 mouse_genomes_project 11 122078651 122089368 + MGP_129S1SvImJ_P0033820 6030468B19Rik protein_coding protein_coding MGP_129S1SvImJ_T0012586.1 MGP_129S1SvImJ_G0010675.1 mouse_genomes_project 11 40046125 40046669 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006244.1 MGP_129S1SvImJ_G0005217.1 mouse_genomes_project 11 43973390 43987282 - Gm12159 lincRNA lincRNA MGP_129S1SvImJ_T0003359.1 MGP_129S1SvImJ_G0003098.1 mouse_genomes_project 11 119426932 119428661 - Ict1os antisense antisense MGP_129S1SvImJ_T0012482.1 MGP_129S1SvImJ_G0010571.1 mouse_genomes_project 11 3570448 3570768 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032916.1 MGP_129S1SvImJ_G0019266.1 mouse_genomes_project 11 106747511 106748521 + MGP_129S1SvImJ_P0032916 Rprml protein_coding protein_coding MGP_129S1SvImJ_T0033607.1 MGP_129S1SvImJ_G0019413.1 mouse_genomes_project 11 120164735 120174636 - MGP_129S1SvImJ_P0033607 Wbp2 protein_coding protein_coding MGP_129S1SvImJ_T0033608.1 MGP_129S1SvImJ_G0019413.1 mouse_genomes_project 11 120165414 120174636 - MGP_129S1SvImJ_P0033608 Wbp2 protein_coding protein_coding MGP_129S1SvImJ_T0033609.1 MGP_129S1SvImJ_G0019413.1 mouse_genomes_project 11 120165559 120167648 - Wbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0033610.1 MGP_129S1SvImJ_G0019413.1 mouse_genomes_project 11 120167991 120174636 - Wbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0033611.1 MGP_129S1SvImJ_G0019413.1 mouse_genomes_project 11 120170695 120174613 - Wbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0012577.1 MGP_129S1SvImJ_G0010666.1 mouse_genomes_project 11 33700156 33700628 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012552.1 MGP_129S1SvImJ_G0010641.1 mouse_genomes_project 11 25597863 25598358 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012725.1 MGP_129S1SvImJ_G0010814.1 mouse_genomes_project 11 92350393 92350933 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003284.1 MGP_129S1SvImJ_G0003037.1 mouse_genomes_project 11 97334868 97348799 + Dlx4os antisense antisense MGP_129S1SvImJ_T0032752.1 MGP_129S1SvImJ_G0019234.1 mouse_genomes_project 11 105373181 105377741 - MGP_129S1SvImJ_P0032752 Slc25a39 protein_coding protein_coding MGP_129S1SvImJ_T0032753.1 MGP_129S1SvImJ_G0019234.1 mouse_genomes_project 11 105373181 105377686 - MGP_129S1SvImJ_P0032753 Slc25a39 protein_coding protein_coding MGP_129S1SvImJ_T0032754.1 MGP_129S1SvImJ_G0019234.1 mouse_genomes_project 11 105373238 105374690 - MGP_129S1SvImJ_P0032754 Slc25a39 protein_coding protein_coding MGP_129S1SvImJ_T0032755.1 MGP_129S1SvImJ_G0019234.1 mouse_genomes_project 11 105373341 105377703 - Slc25a39 protein_coding retained_intron MGP_129S1SvImJ_T0032756.1 MGP_129S1SvImJ_G0019234.1 mouse_genomes_project 11 105373987 105377705 - MGP_129S1SvImJ_P0032756 Slc25a39 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032757.1 MGP_129S1SvImJ_G0019234.1 mouse_genomes_project 11 105374214 105377653 - Slc25a39 protein_coding retained_intron MGP_129S1SvImJ_T0032758.1 MGP_129S1SvImJ_G0019234.1 mouse_genomes_project 11 105374228 105377013 - MGP_129S1SvImJ_P0032758 Slc25a39 protein_coding protein_coding MGP_129S1SvImJ_T0032759.1 MGP_129S1SvImJ_G0019234.1 mouse_genomes_project 11 105374258 105377684 - MGP_129S1SvImJ_P0032759 Slc25a39 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032760.1 MGP_129S1SvImJ_G0019234.1 mouse_genomes_project 11 105374585 105377660 - Slc25a39 protein_coding retained_intron MGP_129S1SvImJ_T0032761.1 MGP_129S1SvImJ_G0019234.1 mouse_genomes_project 11 105374680 105377512 - MGP_129S1SvImJ_P0032761 Slc25a39 protein_coding protein_coding MGP_129S1SvImJ_T0032762.1 MGP_129S1SvImJ_G0019234.1 mouse_genomes_project 11 105374805 105377152 - MGP_129S1SvImJ_P0032762 Slc25a39 protein_coding protein_coding MGP_129S1SvImJ_T0032763.1 MGP_129S1SvImJ_G0019234.1 mouse_genomes_project 11 105374983 105377580 - MGP_129S1SvImJ_P0032763 Slc25a39 protein_coding protein_coding MGP_129S1SvImJ_T0032764.1 MGP_129S1SvImJ_G0019234.1 mouse_genomes_project 11 105375050 105378143 - MGP_129S1SvImJ_P0032764 Slc25a39 protein_coding protein_coding MGP_129S1SvImJ_T0032765.1 MGP_129S1SvImJ_G0019234.1 mouse_genomes_project 11 105375219 105377005 - Slc25a39 protein_coding processed_transcript MGP_129S1SvImJ_T0032766.1 MGP_129S1SvImJ_G0019234.1 mouse_genomes_project 11 105375935 105377081 - Slc25a39 protein_coding retained_intron MGP_129S1SvImJ_T0012471.1 MGP_129S1SvImJ_G0010560.1 mouse_genomes_project 11 518520 518951 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034199.1 MGP_129S1SvImJ_G0019527.1 mouse_genomes_project 11 125250657 125250777 + MGP_129S1SvImJ_P0034199 protein_coding protein_coding MGP_129S1SvImJ_T0029145.1 MGP_129S1SvImJ_G0018318.1 mouse_genomes_project 11 54197020 54275132 - MGP_129S1SvImJ_P0029145 Cdc42se2 protein_coding protein_coding MGP_129S1SvImJ_T0029146.1 MGP_129S1SvImJ_G0018318.1 mouse_genomes_project 11 54203138 54275103 - MGP_129S1SvImJ_P0029146 Cdc42se2 protein_coding protein_coding MGP_129S1SvImJ_T0029147.1 MGP_129S1SvImJ_G0018318.1 mouse_genomes_project 11 54221395 54275098 - Cdc42se2 protein_coding processed_transcript MGP_129S1SvImJ_T0029148.1 MGP_129S1SvImJ_G0018318.1 mouse_genomes_project 11 54221719 54275082 - Cdc42se2 protein_coding processed_transcript MGP_129S1SvImJ_T0029149.1 MGP_129S1SvImJ_G0018318.1 mouse_genomes_project 11 54221854 54244674 - Cdc42se2 protein_coding processed_transcript MGP_129S1SvImJ_T0009737.1 MGP_129S1SvImJ_G0007853.1 mouse_genomes_project 11 84355005 84355068 - Gm27598 miRNA miRNA MGP_129S1SvImJ_T0029331.1 MGP_129S1SvImJ_G0018390.1 mouse_genomes_project 11 58991201 58999214 - MGP_129S1SvImJ_P0029331 Guk1 protein_coding protein_coding MGP_129S1SvImJ_T0029332.1 MGP_129S1SvImJ_G0018390.1 mouse_genomes_project 11 58991373 58995057 - MGP_129S1SvImJ_P0029332 Guk1 protein_coding protein_coding MGP_129S1SvImJ_T0029333.1 MGP_129S1SvImJ_G0018390.1 mouse_genomes_project 11 58991436 58992771 - Guk1 protein_coding retained_intron MGP_129S1SvImJ_T0029334.1 MGP_129S1SvImJ_G0018390.1 mouse_genomes_project 11 58991482 58992175 - Guk1 protein_coding retained_intron MGP_129S1SvImJ_T0029335.1 MGP_129S1SvImJ_G0018390.1 mouse_genomes_project 11 58993497 58999074 - Guk1 protein_coding retained_intron MGP_129S1SvImJ_T0029336.1 MGP_129S1SvImJ_G0018390.1 mouse_genomes_project 11 58994107 58999484 - MGP_129S1SvImJ_P0029336 Guk1 protein_coding protein_coding MGP_129S1SvImJ_T0030915.1 MGP_129S1SvImJ_G0018756.1 mouse_genomes_project 11 78737971 78740266 - MGP_129S1SvImJ_P0030915 Gm10277 protein_coding protein_coding MGP_129S1SvImJ_T0101608.1 MGP_129S1SvImJ_G0039656.1 mouse_genomes_project 11 1532030 1533635 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0012661.1 MGP_129S1SvImJ_G0010750.1 mouse_genomes_project 11 65366487 65367079 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006352.1 MGP_129S1SvImJ_G0005297.1 mouse_genomes_project 11 104500421 104500983 + Gm11635 lincRNA lincRNA MGP_129S1SvImJ_T0006353.1 MGP_129S1SvImJ_G0005297.1 mouse_genomes_project 11 104500507 104506140 + Gm11635 lincRNA lincRNA MGP_129S1SvImJ_T0006197.1 MGP_129S1SvImJ_G0005176.1 mouse_genomes_project 11 16491810 16503543 + 4933406G16Rik lincRNA lincRNA MGP_129S1SvImJ_T0006383.1 MGP_129S1SvImJ_G0005321.1 mouse_genomes_project 11 121218827 121228957 - lincRNA lincRNA MGP_129S1SvImJ_T0006384.1 MGP_129S1SvImJ_G0005321.1 mouse_genomes_project 11 121223922 121228952 - lincRNA lincRNA MGP_129S1SvImJ_T0101850.1 MGP_129S1SvImJ_G0039794.1 mouse_genomes_project 11 84349498 84366616 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0029286.1 MGP_129S1SvImJ_G0018367.1 mouse_genomes_project 11 58428873 58524180 + MGP_129S1SvImJ_P0029286 protein_coding protein_coding MGP_129S1SvImJ_T0029370.1 MGP_129S1SvImJ_G0018402.1 mouse_genomes_project 11 59415642 59416761 - MGP_129S1SvImJ_P0029370 Olfr222 protein_coding protein_coding MGP_129S1SvImJ_T0030454.1 MGP_129S1SvImJ_G0018629.1 mouse_genomes_project 11 72646548 72752140 - MGP_129S1SvImJ_P0030454 Pitpnm3 protein_coding protein_coding MGP_129S1SvImJ_T0030455.1 MGP_129S1SvImJ_G0018629.1 mouse_genomes_project 11 72646548 72752083 - MGP_129S1SvImJ_P0030455 Pitpnm3 protein_coding protein_coding MGP_129S1SvImJ_T0030456.1 MGP_129S1SvImJ_G0018629.1 mouse_genomes_project 11 72650140 72651081 - Pitpnm3 protein_coding processed_transcript MGP_129S1SvImJ_T0030457.1 MGP_129S1SvImJ_G0018629.1 mouse_genomes_project 11 72658336 72662243 - Pitpnm3 protein_coding retained_intron MGP_129S1SvImJ_T0030458.1 MGP_129S1SvImJ_G0018629.1 mouse_genomes_project 11 72674942 72752140 - Pitpnm3 protein_coding retained_intron MGP_129S1SvImJ_T0030725.1 MGP_129S1SvImJ_G0018716.1 mouse_genomes_project 11 76266750 76282535 + MGP_129S1SvImJ_P0030725 Scarf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030726.1 MGP_129S1SvImJ_G0018716.1 mouse_genomes_project 11 76266753 76282537 + MGP_129S1SvImJ_P0030726 Scarf1 protein_coding protein_coding MGP_129S1SvImJ_T0029292.1 MGP_129S1SvImJ_G0018373.1 mouse_genomes_project 11 58538773 58543882 + MGP_129S1SvImJ_P0029292 Olfr315 protein_coding protein_coding MGP_129S1SvImJ_T0029293.1 MGP_129S1SvImJ_G0018373.1 mouse_genomes_project 11 58543462 58544460 + MGP_129S1SvImJ_P0029293 Olfr315 protein_coding protein_coding MGP_129S1SvImJ_T0012468.1 MGP_129S1SvImJ_G0010557.1 mouse_genomes_project 11 339091 339567 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032392.1 MGP_129S1SvImJ_G0019162.1 mouse_genomes_project 11 103385900 103393506 + MGP_129S1SvImJ_P0032392 Nkiras2 protein_coding protein_coding MGP_129S1SvImJ_T0032393.1 MGP_129S1SvImJ_G0019162.1 mouse_genomes_project 11 103386939 103393123 + MGP_129S1SvImJ_P0032393 Nkiras2 protein_coding protein_coding MGP_129S1SvImJ_T0032394.1 MGP_129S1SvImJ_G0019162.1 mouse_genomes_project 11 103389529 103394314 + MGP_129S1SvImJ_P0032394 Nkiras2 protein_coding protein_coding MGP_129S1SvImJ_T0032395.1 MGP_129S1SvImJ_G0019162.1 mouse_genomes_project 11 103389573 103391585 + Nkiras2 protein_coding processed_transcript MGP_129S1SvImJ_T0032396.1 MGP_129S1SvImJ_G0019162.1 mouse_genomes_project 11 103389601 103393293 + Nkiras2 protein_coding processed_transcript MGP_129S1SvImJ_T0032397.1 MGP_129S1SvImJ_G0019162.1 mouse_genomes_project 11 103389664 103392824 + MGP_129S1SvImJ_P0032397 Nkiras2 protein_coding protein_coding MGP_129S1SvImJ_T0006253.1 MGP_129S1SvImJ_G0005225.1 mouse_genomes_project 11 50407048 50437454 - lincRNA lincRNA MGP_129S1SvImJ_T0006254.1 MGP_129S1SvImJ_G0005225.1 mouse_genomes_project 11 50407466 50436562 - lincRNA lincRNA MGP_129S1SvImJ_T0030364.1 MGP_129S1SvImJ_G0018613.1 mouse_genomes_project 11 71235730 71250901 - MGP_129S1SvImJ_P0030364 Inca1 protein_coding protein_coding MGP_129S1SvImJ_T0030365.1 MGP_129S1SvImJ_G0018613.1 mouse_genomes_project 11 71235730 71250901 - MGP_129S1SvImJ_P0030365 Inca1 protein_coding protein_coding MGP_129S1SvImJ_T0030366.1 MGP_129S1SvImJ_G0018613.1 mouse_genomes_project 11 71235730 71250901 - MGP_129S1SvImJ_P0030366 Inca1 protein_coding protein_coding MGP_129S1SvImJ_T0030367.1 MGP_129S1SvImJ_G0018613.1 mouse_genomes_project 11 71235730 71250901 - MGP_129S1SvImJ_P0030367 Inca1 protein_coding protein_coding MGP_129S1SvImJ_T0030368.1 MGP_129S1SvImJ_G0018613.1 mouse_genomes_project 11 71235738 71250855 - MGP_129S1SvImJ_P0030368 Inca1 protein_coding protein_coding MGP_129S1SvImJ_T0029924.1 MGP_129S1SvImJ_G0018519.1 mouse_genomes_project 11 69525373 69527905 - MGP_129S1SvImJ_P0029924 9130213A22Rik protein_coding protein_coding MGP_129S1SvImJ_T0034260.1 MGP_129S1SvImJ_G0019541.1 mouse_genomes_project 11 125715248 125743212 - MGP_129S1SvImJ_P0034260 Ogfod3 protein_coding protein_coding MGP_129S1SvImJ_T0028171.1 MGP_129S1SvImJ_G0018067.1 mouse_genomes_project 11 18091383 18203468 + MGP_129S1SvImJ_P0028171 Sertad2 protein_coding protein_coding MGP_129S1SvImJ_T0028172.1 MGP_129S1SvImJ_G0018067.1 mouse_genomes_project 11 18182414 18203468 + MGP_129S1SvImJ_P0028172 Sertad2 protein_coding protein_coding MGP_129S1SvImJ_T0028173.1 MGP_129S1SvImJ_G0018067.1 mouse_genomes_project 11 18197601 18199512 + MGP_129S1SvImJ_P0028173 Sertad2 protein_coding protein_coding MGP_129S1SvImJ_T0033967.1 MGP_129S1SvImJ_G0019485.1 mouse_genomes_project 11 124020425 124242324 + Rptor protein_coding retained_intron MGP_129S1SvImJ_T0033968.1 MGP_129S1SvImJ_G0019485.1 mouse_genomes_project 11 124020515 124199272 + Rptor protein_coding retained_intron MGP_129S1SvImJ_T0033969.1 MGP_129S1SvImJ_G0019485.1 mouse_genomes_project 11 124020535 124264229 + Rptor protein_coding retained_intron MGP_129S1SvImJ_T0033970.1 MGP_129S1SvImJ_G0019485.1 mouse_genomes_project 11 124020669 124320424 + MGP_129S1SvImJ_P0033970 Rptor protein_coding protein_coding MGP_129S1SvImJ_T0033971.1 MGP_129S1SvImJ_G0019485.1 mouse_genomes_project 11 124021218 124320593 + MGP_129S1SvImJ_P0033971 Rptor protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033972.1 MGP_129S1SvImJ_G0019485.1 mouse_genomes_project 11 124077723 124285876 + Rptor protein_coding retained_intron MGP_129S1SvImJ_T0033973.1 MGP_129S1SvImJ_G0019485.1 mouse_genomes_project 11 124215767 124266140 + MGP_129S1SvImJ_P0033973 Rptor protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033974.1 MGP_129S1SvImJ_G0019485.1 mouse_genomes_project 11 124228228 124287231 + Rptor protein_coding retained_intron MGP_129S1SvImJ_T0033975.1 MGP_129S1SvImJ_G0019485.1 mouse_genomes_project 11 124242094 124276581 + MGP_129S1SvImJ_P0033975 Rptor protein_coding protein_coding MGP_129S1SvImJ_T0033976.1 MGP_129S1SvImJ_G0019485.1 mouse_genomes_project 11 124276541 124317170 + MGP_129S1SvImJ_P0033976 Rptor protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033977.1 MGP_129S1SvImJ_G0019485.1 mouse_genomes_project 11 124276591 124278085 + Rptor protein_coding retained_intron MGP_129S1SvImJ_T0033978.1 MGP_129S1SvImJ_G0019485.1 mouse_genomes_project 11 124277726 124306058 + MGP_129S1SvImJ_P0033978 Rptor protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030685.1 MGP_129S1SvImJ_G0018706.1 mouse_genomes_project 11 75909242 75927076 - MGP_129S1SvImJ_P0030685 Dph1 protein_coding protein_coding MGP_129S1SvImJ_T0030686.1 MGP_129S1SvImJ_G0018706.1 mouse_genomes_project 11 75909295 75916014 - Dph1 protein_coding retained_intron MGP_129S1SvImJ_T0030688.1 MGP_129S1SvImJ_G0018706.1 mouse_genomes_project 11 75909895 75914015 - Dph1 protein_coding processed_transcript MGP_129S1SvImJ_T0030689.1 MGP_129S1SvImJ_G0018706.1 mouse_genomes_project 11 75910788 75916206 - Dph1 protein_coding processed_transcript MGP_129S1SvImJ_T0030690.1 MGP_129S1SvImJ_G0018706.1 mouse_genomes_project 11 75913527 75927798 - MGP_129S1SvImJ_P0030690 Dph1 protein_coding protein_coding MGP_129S1SvImJ_T0003208.1 MGP_129S1SvImJ_G0002977.1 mouse_genomes_project 11 60848128 60859870 - Map2k3os antisense antisense MGP_129S1SvImJ_T0032855.1 MGP_129S1SvImJ_G0019254.1 mouse_genomes_project 11 106115638 106137944 - MGP_129S1SvImJ_P0032855 Plcd3 protein_coding protein_coding MGP_129S1SvImJ_T0032856.1 MGP_129S1SvImJ_G0019254.1 mouse_genomes_project 11 106115638 106123629 - MGP_129S1SvImJ_P0032856 Plcd3 protein_coding protein_coding MGP_129S1SvImJ_T0032857.1 MGP_129S1SvImJ_G0019254.1 mouse_genomes_project 11 106115919 106117085 - Plcd3 protein_coding processed_transcript MGP_129S1SvImJ_T0032858.1 MGP_129S1SvImJ_G0019254.1 mouse_genomes_project 11 106125888 106137904 - Plcd3 protein_coding processed_transcript MGP_129S1SvImJ_T0032859.1 MGP_129S1SvImJ_G0019254.1 mouse_genomes_project 11 106127063 106137877 - Plcd3 protein_coding processed_transcript MGP_129S1SvImJ_T0017240.1 MGP_129S1SvImJ_G0015182.1 mouse_genomes_project 11 72833040 72836354 + 4930563E22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017241.1 MGP_129S1SvImJ_G0015182.1 mouse_genomes_project 11 72833074 72836348 + 4930563E22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0098455.1 MGP_129S1SvImJ_G0036540.1 mouse_genomes_project 11 87307393 87307509 + Gm23473 rRNA rRNA MGP_129S1SvImJ_T0031585.1 MGP_129S1SvImJ_G0018922.1 mouse_genomes_project 11 89899315 89906412 + MGP_129S1SvImJ_P0031585 Mrps23 protein_coding protein_coding MGP_129S1SvImJ_T0031586.1 MGP_129S1SvImJ_G0018922.1 mouse_genomes_project 11 89899338 89906412 + MGP_129S1SvImJ_P0031586 Mrps23 protein_coding protein_coding MGP_129S1SvImJ_T0031587.1 MGP_129S1SvImJ_G0018922.1 mouse_genomes_project 11 89899351 89905585 + MGP_129S1SvImJ_P0031587 Mrps23 protein_coding protein_coding MGP_129S1SvImJ_T0031588.1 MGP_129S1SvImJ_G0018922.1 mouse_genomes_project 11 89899351 89905124 + MGP_129S1SvImJ_P0031588 Mrps23 protein_coding protein_coding MGP_129S1SvImJ_T0031589.1 MGP_129S1SvImJ_G0018922.1 mouse_genomes_project 11 89899371 89905886 + MGP_129S1SvImJ_P0031589 Mrps23 protein_coding protein_coding MGP_129S1SvImJ_T0033023.1 MGP_129S1SvImJ_G0019289.1 mouse_genomes_project 11 109262442 109274709 + MGP_129S1SvImJ_P0033023 Ace3 protein_coding protein_coding MGP_129S1SvImJ_T0100490.1 MGP_129S1SvImJ_G0038557.1 mouse_genomes_project 11 25207549 25207681 - Gm25387 snoRNA snoRNA MGP_129S1SvImJ_T0017211.1 MGP_129S1SvImJ_G0015166.1 mouse_genomes_project 11 40376923 40641952 + processed_transcript processed_transcript MGP_129S1SvImJ_T0017212.1 MGP_129S1SvImJ_G0015166.1 mouse_genomes_project 11 40550562 40646368 + processed_transcript processed_transcript MGP_129S1SvImJ_T0017213.1 MGP_129S1SvImJ_G0015166.1 mouse_genomes_project 11 40636137 40644362 + processed_transcript processed_transcript MGP_129S1SvImJ_T0029693.1 MGP_129S1SvImJ_G0018464.1 mouse_genomes_project 11 62936354 62971827 + MGP_129S1SvImJ_P0029693 Fbxw10 protein_coding protein_coding MGP_129S1SvImJ_T0029694.1 MGP_129S1SvImJ_G0018464.1 mouse_genomes_project 11 62936408 62971824 + MGP_129S1SvImJ_P0029694 Fbxw10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029695.1 MGP_129S1SvImJ_G0018464.1 mouse_genomes_project 11 62936408 62971824 + MGP_129S1SvImJ_P0029695 Fbxw10 protein_coding protein_coding MGP_129S1SvImJ_T0029696.1 MGP_129S1SvImJ_G0018464.1 mouse_genomes_project 11 62936413 62941280 + Fbxw10 protein_coding retained_intron MGP_129S1SvImJ_T0029697.1 MGP_129S1SvImJ_G0018464.1 mouse_genomes_project 11 62936417 62971805 + MGP_129S1SvImJ_P0029697 Fbxw10 protein_coding protein_coding MGP_129S1SvImJ_T0029698.1 MGP_129S1SvImJ_G0018464.1 mouse_genomes_project 11 62969235 62971115 + Fbxw10 protein_coding processed_transcript MGP_129S1SvImJ_T0017224.1 MGP_129S1SvImJ_G0015174.1 mouse_genomes_project 11 59008673 59011014 - 2610507I01Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0009721.1 MGP_129S1SvImJ_G0007837.1 mouse_genomes_project 11 73618099 73618186 + Gm44467 miRNA miRNA MGP_129S1SvImJ_T0017264.1 MGP_129S1SvImJ_G0015194.1 mouse_genomes_project 11 96189506 96215532 + B230206L02Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017265.1 MGP_129S1SvImJ_G0015194.1 mouse_genomes_project 11 96189523 96215532 + B230206L02Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017266.1 MGP_129S1SvImJ_G0015194.1 mouse_genomes_project 11 96191681 96194867 + B230206L02Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0100524.1 MGP_129S1SvImJ_G0038591.1 mouse_genomes_project 11 79583262 79583353 - Gm22947 snoRNA snoRNA MGP_129S1SvImJ_T0033267.1 MGP_129S1SvImJ_G0019345.1 mouse_genomes_project 11 114027285 114159835 + MGP_129S1SvImJ_P0033267 Map2k6 protein_coding protein_coding MGP_129S1SvImJ_T0033268.1 MGP_129S1SvImJ_G0019345.1 mouse_genomes_project 11 114027285 114147995 + MGP_129S1SvImJ_P0033268 Map2k6 protein_coding protein_coding MGP_129S1SvImJ_T0033269.1 MGP_129S1SvImJ_G0019345.1 mouse_genomes_project 11 114027422 114147995 + Map2k6 protein_coding processed_transcript MGP_129S1SvImJ_T0033270.1 MGP_129S1SvImJ_G0019345.1 mouse_genomes_project 11 114109989 114132127 + Map2k6 protein_coding processed_transcript MGP_129S1SvImJ_T0033271.1 MGP_129S1SvImJ_G0019345.1 mouse_genomes_project 11 114111694 114130532 + Map2k6 protein_coding processed_transcript MGP_129S1SvImJ_T0033272.1 MGP_129S1SvImJ_G0019345.1 mouse_genomes_project 11 114111839 114147221 + MGP_129S1SvImJ_P0033272 Map2k6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0033273.1 MGP_129S1SvImJ_G0019345.1 mouse_genomes_project 11 114111845 114147221 + MGP_129S1SvImJ_P0033273 Map2k6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0031255.1 MGP_129S1SvImJ_G0018840.1 mouse_genomes_project 11 84427281 84433103 + MGP_129S1SvImJ_P0031255 Slfn1 protein_coding protein_coding MGP_129S1SvImJ_T0030583.1 MGP_129S1SvImJ_G0018667.1 mouse_genomes_project 11 74183389 74189048 - MGP_129S1SvImJ_P0030583 Olfr381 protein_coding protein_coding MGP_129S1SvImJ_T0032339.1 MGP_129S1SvImJ_G0019152.1 mouse_genomes_project 11 103127570 103131330 - Jup protein_coding processed_transcript MGP_129S1SvImJ_T0032340.1 MGP_129S1SvImJ_G0019152.1 mouse_genomes_project 11 103129231 103156079 - MGP_129S1SvImJ_P0032340 Jup protein_coding protein_coding MGP_129S1SvImJ_T0032341.1 MGP_129S1SvImJ_G0019152.1 mouse_genomes_project 11 103129671 103132739 - Jup protein_coding processed_transcript MGP_129S1SvImJ_T0032342.1 MGP_129S1SvImJ_G0019152.1 mouse_genomes_project 11 103130909 103156079 - MGP_129S1SvImJ_P0032342 Jup protein_coding protein_coding MGP_129S1SvImJ_T0032343.1 MGP_129S1SvImJ_G0019152.1 mouse_genomes_project 11 103130970 103131922 - Jup protein_coding processed_transcript MGP_129S1SvImJ_T0032344.1 MGP_129S1SvImJ_G0019152.1 mouse_genomes_project 11 103139646 103141425 - Jup protein_coding processed_transcript MGP_129S1SvImJ_T0032345.1 MGP_129S1SvImJ_G0019152.1 mouse_genomes_project 11 103141647 103156093 - Jup protein_coding processed_transcript MGP_129S1SvImJ_T0032346.1 MGP_129S1SvImJ_G0019152.1 mouse_genomes_project 11 103141727 103145074 - Jup protein_coding processed_transcript MGP_129S1SvImJ_T0032347.1 MGP_129S1SvImJ_G0019152.1 mouse_genomes_project 11 103141736 103145103 - Jup protein_coding processed_transcript MGP_129S1SvImJ_T0031872.1 MGP_129S1SvImJ_G0018994.1 mouse_genomes_project 11 98298804 98306102 + MGP_129S1SvImJ_P0031872 Gip protein_coding protein_coding MGP_129S1SvImJ_T0031873.1 MGP_129S1SvImJ_G0018994.1 mouse_genomes_project 11 98299305 98306102 + MGP_129S1SvImJ_P0031873 Gip protein_coding protein_coding MGP_129S1SvImJ_T0003169.1 MGP_129S1SvImJ_G0002944.1 mouse_genomes_project 11 45047185 45048295 - Gm16034 antisense antisense MGP_129S1SvImJ_T0006351.1 MGP_129S1SvImJ_G0005296.1 mouse_genomes_project 11 103051852 103053893 + Gm12349 lincRNA lincRNA MGP_129S1SvImJ_T0033949.1 MGP_129S1SvImJ_G0019481.1 mouse_genomes_project 11 123738731 123775716 + MGP_129S1SvImJ_P0033949 Slc26a11 protein_coding protein_coding MGP_129S1SvImJ_T0033950.1 MGP_129S1SvImJ_G0019481.1 mouse_genomes_project 11 123738762 123749327 + Slc26a11 protein_coding processed_transcript MGP_129S1SvImJ_T0033951.1 MGP_129S1SvImJ_G0019481.1 mouse_genomes_project 11 123738767 123760894 + Slc26a11 protein_coding processed_transcript MGP_129S1SvImJ_T0033952.1 MGP_129S1SvImJ_G0019481.1 mouse_genomes_project 11 123749720 123775686 + Slc26a11 protein_coding processed_transcript MGP_129S1SvImJ_T0012617.1 MGP_129S1SvImJ_G0010706.1 mouse_genomes_project 11 53145844 53146197 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032283.1 MGP_129S1SvImJ_G0019113.1 mouse_genomes_project 11 102429674 102429752 - MGP_129S1SvImJ_P0032283 Gm14180 protein_coding protein_coding MGP_129S1SvImJ_T0030210.1 MGP_129S1SvImJ_G0018581.1 mouse_genomes_project 11 70602900 70616112 + MGP_129S1SvImJ_P0030210 Asgr2 protein_coding protein_coding MGP_129S1SvImJ_T0030211.1 MGP_129S1SvImJ_G0018581.1 mouse_genomes_project 11 70603005 70615642 + MGP_129S1SvImJ_P0030211 Asgr2 protein_coding protein_coding MGP_129S1SvImJ_T0030212.1 MGP_129S1SvImJ_G0018581.1 mouse_genomes_project 11 70607949 70616087 + Asgr2 protein_coding retained_intron MGP_129S1SvImJ_T0029539.1 MGP_129S1SvImJ_G0018438.1 mouse_genomes_project 11 61411019 61416684 - MGP_129S1SvImJ_P0029539 Rnf112 protein_coding protein_coding MGP_129S1SvImJ_T0029540.1 MGP_129S1SvImJ_G0018438.1 mouse_genomes_project 11 61411019 61416583 - MGP_129S1SvImJ_P0029540 Rnf112 protein_coding protein_coding MGP_129S1SvImJ_T0029541.1 MGP_129S1SvImJ_G0018438.1 mouse_genomes_project 11 61411020 61416583 - MGP_129S1SvImJ_P0029541 Rnf112 protein_coding protein_coding MGP_129S1SvImJ_T0029542.1 MGP_129S1SvImJ_G0018438.1 mouse_genomes_project 11 61414623 61416709 - Rnf112 protein_coding processed_transcript MGP_129S1SvImJ_T0029543.1 MGP_129S1SvImJ_G0018438.1 mouse_genomes_project 11 61414841 61416497 - Rnf112 protein_coding processed_transcript MGP_129S1SvImJ_T0029544.1 MGP_129S1SvImJ_G0018438.1 mouse_genomes_project 11 61415313 61416520 - Rnf112 protein_coding processed_transcript MGP_129S1SvImJ_T0029545.1 MGP_129S1SvImJ_G0018438.1 mouse_genomes_project 11 61415494 61416511 - Rnf112 protein_coding processed_transcript MGP_129S1SvImJ_T0006274.1 MGP_129S1SvImJ_G0005244.1 mouse_genomes_project 11 65477031 65488296 - Gm12295 lincRNA lincRNA MGP_129S1SvImJ_T0006275.1 MGP_129S1SvImJ_G0005244.1 mouse_genomes_project 11 65486402 65570265 - Gm12295 lincRNA lincRNA MGP_129S1SvImJ_T0030602.1 MGP_129S1SvImJ_G0018680.1 mouse_genomes_project 11 74654446 74655537 + MGP_129S1SvImJ_P0030602 Olfr397 protein_coding protein_coding MGP_129S1SvImJ_T0012503.1 MGP_129S1SvImJ_G0010592.1 mouse_genomes_project 11 12071263 12071860 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009670.1 MGP_129S1SvImJ_G0007786.1 mouse_genomes_project 11 22484196 22484340 - Gm25507 miRNA miRNA MGP_129S1SvImJ_T0033386.1 MGP_129S1SvImJ_G0019374.1 mouse_genomes_project 11 119184836 119189384 - MGP_129S1SvImJ_P0033386 Nat9 protein_coding protein_coding MGP_129S1SvImJ_T0033387.1 MGP_129S1SvImJ_G0019374.1 mouse_genomes_project 11 119184836 119189873 - MGP_129S1SvImJ_P0033387 Nat9 protein_coding protein_coding MGP_129S1SvImJ_T0033388.1 MGP_129S1SvImJ_G0019374.1 mouse_genomes_project 11 119184836 119189361 - MGP_129S1SvImJ_P0033388 Nat9 protein_coding protein_coding MGP_129S1SvImJ_T0033389.1 MGP_129S1SvImJ_G0019374.1 mouse_genomes_project 11 119184836 119189419 - MGP_129S1SvImJ_P0033389 Nat9 protein_coding protein_coding MGP_129S1SvImJ_T0033390.1 MGP_129S1SvImJ_G0019374.1 mouse_genomes_project 11 119186505 119189291 - Nat9 protein_coding processed_transcript MGP_129S1SvImJ_T0033391.1 MGP_129S1SvImJ_G0019374.1 mouse_genomes_project 11 119186609 119189110 - Nat9 protein_coding processed_transcript MGP_129S1SvImJ_T0033392.1 MGP_129S1SvImJ_G0019374.1 mouse_genomes_project 11 119186799 119189871 - Nat9 protein_coding processed_transcript MGP_129S1SvImJ_T0033393.1 MGP_129S1SvImJ_G0019374.1 mouse_genomes_project 11 119186800 119189888 - Nat9 protein_coding processed_transcript MGP_129S1SvImJ_T0033394.1 MGP_129S1SvImJ_G0019374.1 mouse_genomes_project 11 119186983 119189305 - Nat9 protein_coding processed_transcript MGP_129S1SvImJ_T0030567.1 MGP_129S1SvImJ_G0018659.1 mouse_genomes_project 11 73950249 73983186 + MGP_129S1SvImJ_P0030567 Trpv3 protein_coding protein_coding MGP_129S1SvImJ_T0012801.1 MGP_129S1SvImJ_G0010890.1 mouse_genomes_project 11 125620720 125620888 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009702.1 MGP_129S1SvImJ_G0007818.1 mouse_genomes_project 11 65260742 65260841 - Gm25991 miRNA miRNA MGP_129S1SvImJ_T0017323.1 MGP_129S1SvImJ_G0015226.1 mouse_genomes_project 11 124678855 124680639 - 2900052L18Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0012651.1 MGP_129S1SvImJ_G0010740.1 mouse_genomes_project 11 61156333 61156804 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033612.1 MGP_129S1SvImJ_G0019414.1 mouse_genomes_project 11 120194992 120197359 - Trim47 protein_coding processed_transcript MGP_129S1SvImJ_T0033613.1 MGP_129S1SvImJ_G0019414.1 mouse_genomes_project 11 120194992 120199479 - MGP_129S1SvImJ_P0033613 Trim47 protein_coding protein_coding MGP_129S1SvImJ_T0033614.1 MGP_129S1SvImJ_G0019414.1 mouse_genomes_project 11 120194992 120199488 - MGP_129S1SvImJ_P0033614 Trim47 protein_coding protein_coding MGP_129S1SvImJ_T0033615.1 MGP_129S1SvImJ_G0019414.1 mouse_genomes_project 11 120195449 120196324 - Trim47 protein_coding processed_transcript MGP_129S1SvImJ_T0033616.1 MGP_129S1SvImJ_G0019414.1 mouse_genomes_project 11 120195579 120196980 - Trim47 protein_coding processed_transcript MGP_129S1SvImJ_T0033617.1 MGP_129S1SvImJ_G0019414.1 mouse_genomes_project 11 120195632 120197275 - Trim47 protein_coding processed_transcript MGP_129S1SvImJ_T0033618.1 MGP_129S1SvImJ_G0019414.1 mouse_genomes_project 11 120197050 120216762 - Trim47 protein_coding processed_transcript MGP_129S1SvImJ_T0028548.1 MGP_129S1SvImJ_G0018156.1 mouse_genomes_project 11 34206607 34208110 - MGP_129S1SvImJ_P0028548 Fbll1 protein_coding protein_coding MGP_129S1SvImJ_T0032272.1 MGP_129S1SvImJ_G0019102.1 mouse_genomes_project 11 102259818 102260411 - MGP_129S1SvImJ_P0032272 Krtap1-4 protein_coding protein_coding MGP_129S1SvImJ_T0029452.1 MGP_129S1SvImJ_G0018417.1 mouse_genomes_project 11 60296738 60330414 + MGP_129S1SvImJ_P0029452 Gid4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029453.1 MGP_129S1SvImJ_G0018417.1 mouse_genomes_project 11 60296855 60324764 + MGP_129S1SvImJ_P0029453 Gid4 protein_coding protein_coding MGP_129S1SvImJ_T0012784.1 MGP_129S1SvImJ_G0010873.1 mouse_genomes_project 11 117594000 117594505 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028701.1 MGP_129S1SvImJ_G0018195.1 mouse_genomes_project 11 45377193 45403104 + MGP_129S1SvImJ_P0028701 Havcr2 protein_coding protein_coding MGP_129S1SvImJ_T0028702.1 MGP_129S1SvImJ_G0018195.1 mouse_genomes_project 11 45377227 45403095 + MGP_129S1SvImJ_P0028702 Havcr2 protein_coding protein_coding MGP_129S1SvImJ_T0006208.1 MGP_129S1SvImJ_G0005187.1 mouse_genomes_project 11 21993037 21996893 - Gm12065 lincRNA lincRNA MGP_129S1SvImJ_T0099256.1 MGP_129S1SvImJ_G0037323.1 mouse_genomes_project 11 75434416 75434523 + Gm24211 snRNA snRNA MGP_129S1SvImJ_T0003349.1 MGP_129S1SvImJ_G0003092.1 mouse_genomes_project 11 112904874 112916620 - Gm11696 antisense antisense MGP_129S1SvImJ_T0003350.1 MGP_129S1SvImJ_G0003092.1 mouse_genomes_project 11 112905810 112906463 - Gm11696 antisense antisense MGP_129S1SvImJ_T0003351.1 MGP_129S1SvImJ_G0003092.1 mouse_genomes_project 11 112906803 112917064 - Gm11696 antisense antisense MGP_129S1SvImJ_T0003352.1 MGP_129S1SvImJ_G0003092.1 mouse_genomes_project 11 112907194 112916653 - Gm11696 antisense antisense MGP_129S1SvImJ_T0028225.1 MGP_129S1SvImJ_G0018079.1 mouse_genomes_project 11 20536873 20693183 - MGP_129S1SvImJ_P0028225 Gm28048 protein_coding protein_coding MGP_129S1SvImJ_T0012654.1 MGP_129S1SvImJ_G0010743.1 mouse_genomes_project 11 62322923 62323230 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102157.1 MGP_129S1SvImJ_G0039992.1 mouse_genomes_project 11 102358359 102358569 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102132.1 MGP_129S1SvImJ_G0039967.1 mouse_genomes_project 11 53369529 53369701 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0030459.1 MGP_129S1SvImJ_G0018630.1 mouse_genomes_project 11 72770251 72771626 - 4933427D14Rik protein_coding processed_transcript MGP_129S1SvImJ_T0030460.1 MGP_129S1SvImJ_G0018630.1 mouse_genomes_project 11 72770251 72825359 - MGP_129S1SvImJ_P0030460 4933427D14Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030461.1 MGP_129S1SvImJ_G0018630.1 mouse_genomes_project 11 72770252 72825167 - MGP_129S1SvImJ_P0030461 4933427D14Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030462.1 MGP_129S1SvImJ_G0018630.1 mouse_genomes_project 11 72770419 72821670 - MGP_129S1SvImJ_P0030462 4933427D14Rik protein_coding protein_coding MGP_129S1SvImJ_T0030463.1 MGP_129S1SvImJ_G0018630.1 mouse_genomes_project 11 72771715 72791435 - 4933427D14Rik protein_coding processed_transcript MGP_129S1SvImJ_T0030464.1 MGP_129S1SvImJ_G0018630.1 mouse_genomes_project 11 72813340 72825331 - MGP_129S1SvImJ_P0030464 4933427D14Rik protein_coding protein_coding MGP_129S1SvImJ_T0030465.1 MGP_129S1SvImJ_G0018630.1 mouse_genomes_project 11 72816339 72825120 - 4933427D14Rik protein_coding processed_transcript MGP_129S1SvImJ_T0030466.1 MGP_129S1SvImJ_G0018630.1 mouse_genomes_project 11 72816586 72820508 - 4933427D14Rik protein_coding processed_transcript MGP_129S1SvImJ_T0034069.1 MGP_129S1SvImJ_G0019503.1 mouse_genomes_project 11 124933986 124936728 - Arl16 protein_coding processed_transcript MGP_129S1SvImJ_T0034070.1 MGP_129S1SvImJ_G0019503.1 mouse_genomes_project 11 124934444 124936395 - Arl16 protein_coding processed_transcript MGP_129S1SvImJ_T0034071.1 MGP_129S1SvImJ_G0019503.1 mouse_genomes_project 11 124934558 124936721 - MGP_129S1SvImJ_P0034071 Arl16 protein_coding protein_coding MGP_129S1SvImJ_T0034072.1 MGP_129S1SvImJ_G0019503.1 mouse_genomes_project 11 124934711 124936586 - Arl16 protein_coding processed_transcript MGP_129S1SvImJ_T0034073.1 MGP_129S1SvImJ_G0019503.1 mouse_genomes_project 11 124934718 124936455 - Arl16 protein_coding processed_transcript MGP_129S1SvImJ_T0034074.1 MGP_129S1SvImJ_G0019503.1 mouse_genomes_project 11 124934733 124936541 - Arl16 protein_coding processed_transcript MGP_129S1SvImJ_T0034075.1 MGP_129S1SvImJ_G0019503.1 mouse_genomes_project 11 124934874 124936602 - Arl16 protein_coding processed_transcript MGP_129S1SvImJ_T0034076.1 MGP_129S1SvImJ_G0019503.1 mouse_genomes_project 11 124934888 124936542 - Arl16 protein_coding processed_transcript MGP_129S1SvImJ_T0034077.1 MGP_129S1SvImJ_G0019503.1 mouse_genomes_project 11 124934890 124936517 - Arl16 protein_coding processed_transcript MGP_129S1SvImJ_T0034078.1 MGP_129S1SvImJ_G0019503.1 mouse_genomes_project 11 124935035 124936554 - Arl16 protein_coding processed_transcript MGP_129S1SvImJ_T0034079.1 MGP_129S1SvImJ_G0019503.1 mouse_genomes_project 11 124936025 124936574 - Arl16 protein_coding processed_transcript MGP_129S1SvImJ_T0006319.1 MGP_129S1SvImJ_G0005275.1 mouse_genomes_project 11 89387583 89389285 + Mir142hg lincRNA lincRNA MGP_129S1SvImJ_T0028543.1 MGP_129S1SvImJ_G0018154.1 mouse_genomes_project 11 33488083 34110459 + MGP_129S1SvImJ_P0028543 Slit3 protein_coding protein_coding MGP_129S1SvImJ_T0028544.1 MGP_129S1SvImJ_G0018154.1 mouse_genomes_project 11 33539420 33606912 + Slit3 protein_coding processed_transcript MGP_129S1SvImJ_T0028545.1 MGP_129S1SvImJ_G0018154.1 mouse_genomes_project 11 33545574 33897050 + Slit3 protein_coding processed_transcript MGP_129S1SvImJ_T0028546.1 MGP_129S1SvImJ_G0018154.1 mouse_genomes_project 11 33934612 34007968 + Slit3 protein_coding processed_transcript MGP_129S1SvImJ_T0032860.1 MGP_129S1SvImJ_G0019255.1 mouse_genomes_project 11 106137967 106148488 + MGP_129S1SvImJ_P0032860 Acbd4 protein_coding protein_coding MGP_129S1SvImJ_T0032861.1 MGP_129S1SvImJ_G0019255.1 mouse_genomes_project 11 106137967 106148491 + MGP_129S1SvImJ_P0032861 Acbd4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032862.1 MGP_129S1SvImJ_G0019255.1 mouse_genomes_project 11 106137971 106140307 + Acbd4 protein_coding processed_transcript MGP_129S1SvImJ_T0032863.1 MGP_129S1SvImJ_G0019255.1 mouse_genomes_project 11 106137971 106141683 + MGP_129S1SvImJ_P0032863 Acbd4 protein_coding protein_coding MGP_129S1SvImJ_T0032864.1 MGP_129S1SvImJ_G0019255.1 mouse_genomes_project 11 106137973 106148490 + MGP_129S1SvImJ_P0032864 Acbd4 protein_coding protein_coding MGP_129S1SvImJ_T0032865.1 MGP_129S1SvImJ_G0019255.1 mouse_genomes_project 11 106137994 106139671 + Acbd4 protein_coding retained_intron MGP_129S1SvImJ_T0032866.1 MGP_129S1SvImJ_G0019255.1 mouse_genomes_project 11 106137997 106140465 + MGP_129S1SvImJ_P0032866 Acbd4 protein_coding protein_coding MGP_129S1SvImJ_T0032867.1 MGP_129S1SvImJ_G0019255.1 mouse_genomes_project 11 106138011 106139509 + Acbd4 protein_coding retained_intron MGP_129S1SvImJ_T0032868.1 MGP_129S1SvImJ_G0019255.1 mouse_genomes_project 11 106139306 106141757 + MGP_129S1SvImJ_P0032868 Acbd4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032869.1 MGP_129S1SvImJ_G0019255.1 mouse_genomes_project 11 106139359 106141742 + Acbd4 protein_coding processed_transcript MGP_129S1SvImJ_T0032870.1 MGP_129S1SvImJ_G0019255.1 mouse_genomes_project 11 106139361 106141137 + MGP_129S1SvImJ_P0032870 Acbd4 protein_coding protein_coding MGP_129S1SvImJ_T0032871.1 MGP_129S1SvImJ_G0019255.1 mouse_genomes_project 11 106139393 106140384 + Acbd4 protein_coding retained_intron MGP_129S1SvImJ_T0032872.1 MGP_129S1SvImJ_G0019255.1 mouse_genomes_project 11 106139537 106140773 + Acbd4 protein_coding retained_intron MGP_129S1SvImJ_T0032873.1 MGP_129S1SvImJ_G0019255.1 mouse_genomes_project 11 106140995 106148244 + Acbd4 protein_coding retained_intron MGP_129S1SvImJ_T0032874.1 MGP_129S1SvImJ_G0019255.1 mouse_genomes_project 11 106142473 106148030 + Acbd4 protein_coding processed_transcript MGP_129S1SvImJ_T0032875.1 MGP_129S1SvImJ_G0019255.1 mouse_genomes_project 11 106142494 106148488 + Acbd4 protein_coding processed_transcript MGP_129S1SvImJ_T0003305.1 MGP_129S1SvImJ_G0003055.1 mouse_genomes_project 11 101403438 101419602 - Gm12359 antisense antisense MGP_129S1SvImJ_T0003306.1 MGP_129S1SvImJ_G0003055.1 mouse_genomes_project 11 101404039 101419602 - Gm12359 antisense antisense MGP_129S1SvImJ_T0003307.1 MGP_129S1SvImJ_G0003055.1 mouse_genomes_project 11 101410390 101419573 - Gm12359 antisense antisense MGP_129S1SvImJ_T0032555.1 MGP_129S1SvImJ_G0019199.1 mouse_genomes_project 11 104264812 104275394 - MGP_129S1SvImJ_P0032555 Aarsd1 protein_coding protein_coding MGP_129S1SvImJ_T0032557.1 MGP_129S1SvImJ_G0019199.1 mouse_genomes_project 11 104268757 104275163 - Aarsd1 protein_coding processed_transcript MGP_129S1SvImJ_T0032558.1 MGP_129S1SvImJ_G0019199.1 mouse_genomes_project 11 104269358 104275161 - Aarsd1 protein_coding retained_intron MGP_129S1SvImJ_T0032559.1 MGP_129S1SvImJ_G0019199.1 mouse_genomes_project 11 104271622 104272439 - Aarsd1 protein_coding retained_intron MGP_129S1SvImJ_T0032560.1 MGP_129S1SvImJ_G0019199.1 mouse_genomes_project 11 104274526 104275185 - Aarsd1 protein_coding retained_intron MGP_129S1SvImJ_T0100484.1 MGP_129S1SvImJ_G0038551.1 mouse_genomes_project 11 18843786 18843925 - Gm23582 snoRNA snoRNA MGP_129S1SvImJ_T0027926.1 MGP_129S1SvImJ_G0018008.1 mouse_genomes_project 11 2910773 2920700 - MGP_129S1SvImJ_P0027926 Polm protein_coding protein_coding MGP_129S1SvImJ_T0027927.1 MGP_129S1SvImJ_G0018008.1 mouse_genomes_project 11 2910774 2920927 - MGP_129S1SvImJ_P0027927 Polm protein_coding protein_coding MGP_129S1SvImJ_T0027928.1 MGP_129S1SvImJ_G0018008.1 mouse_genomes_project 11 2912128 2913114 - Polm protein_coding processed_transcript MGP_129S1SvImJ_T0027929.1 MGP_129S1SvImJ_G0018008.1 mouse_genomes_project 11 2917706 2919397 - Polm protein_coding processed_transcript MGP_129S1SvImJ_T0027930.1 MGP_129S1SvImJ_G0018008.1 mouse_genomes_project 11 2919189 2920663 - Polm protein_coding processed_transcript MGP_129S1SvImJ_T0027931.1 MGP_129S1SvImJ_G0018008.1 mouse_genomes_project 11 2919212 2920704 - Polm protein_coding processed_transcript MGP_129S1SvImJ_T0028909.1 MGP_129S1SvImJ_G0018259.1 mouse_genomes_project 11 50151471 50154431 - MGP_129S1SvImJ_P0028909 Prop1 protein_coding protein_coding MGP_129S1SvImJ_T0028910.1 MGP_129S1SvImJ_G0018259.1 mouse_genomes_project 11 50151857 50153120 - Prop1 protein_coding retained_intron MGP_129S1SvImJ_T0028911.1 MGP_129S1SvImJ_G0018259.1 mouse_genomes_project 11 50152879 50154417 - MGP_129S1SvImJ_P0028911 Prop1 protein_coding protein_coding MGP_129S1SvImJ_T0031797.1 MGP_129S1SvImJ_G0018975.1 mouse_genomes_project 11 97212126 97227223 - MGP_129S1SvImJ_P0031797 Pdk2 protein_coding protein_coding MGP_129S1SvImJ_T0031798.1 MGP_129S1SvImJ_G0018975.1 mouse_genomes_project 11 97212822 97214445 - Pdk2 protein_coding processed_transcript MGP_129S1SvImJ_T0031799.1 MGP_129S1SvImJ_G0018975.1 mouse_genomes_project 11 97214596 97215293 - Pdk2 protein_coding processed_transcript MGP_129S1SvImJ_T0031800.1 MGP_129S1SvImJ_G0018975.1 mouse_genomes_project 11 97215522 97226427 - Pdk2 protein_coding processed_transcript MGP_129S1SvImJ_T0031801.1 MGP_129S1SvImJ_G0018975.1 mouse_genomes_project 11 97217782 97226744 - Pdk2 protein_coding processed_transcript MGP_129S1SvImJ_T0027935.1 MGP_129S1SvImJ_G0018010.1 mouse_genomes_project 11 2957962 2964066 - MGP_129S1SvImJ_P0027935 Pold2 protein_coding protein_coding MGP_129S1SvImJ_T0027936.1 MGP_129S1SvImJ_G0018010.1 mouse_genomes_project 11 2957970 2958974 - Pold2 protein_coding retained_intron MGP_129S1SvImJ_T0027937.1 MGP_129S1SvImJ_G0018010.1 mouse_genomes_project 11 2959856 2963439 - MGP_129S1SvImJ_P0027937 Pold2 protein_coding protein_coding MGP_129S1SvImJ_T0027938.1 MGP_129S1SvImJ_G0018010.1 mouse_genomes_project 11 2959893 2962541 - Pold2 protein_coding retained_intron MGP_129S1SvImJ_T0027939.1 MGP_129S1SvImJ_G0018010.1 mouse_genomes_project 11 2960946 2963986 - Pold2 protein_coding processed_transcript MGP_129S1SvImJ_T0031304.1 MGP_129S1SvImJ_G0018859.1 mouse_genomes_project 11 85089827 85092161 + MGP_129S1SvImJ_P0031304 Wfdc18 protein_coding protein_coding MGP_129S1SvImJ_T0031305.1 MGP_129S1SvImJ_G0018859.1 mouse_genomes_project 11 85089935 85092152 + MGP_129S1SvImJ_P0031305 Wfdc18 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031306.1 MGP_129S1SvImJ_G0018859.1 mouse_genomes_project 11 85089937 85091511 + Wfdc18 protein_coding retained_intron MGP_129S1SvImJ_T0012672.1 MGP_129S1SvImJ_G0010761.1 mouse_genomes_project 11 70959838 71323120 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017187.1 MGP_129S1SvImJ_G0015152.1 mouse_genomes_project 11 3874563 3878593 - Gm11981 processed_transcript processed_transcript MGP_129S1SvImJ_T0028052.1 MGP_129S1SvImJ_G0018038.1 mouse_genomes_project 11 6247475 6272404 - MGP_129S1SvImJ_P0028052 Sun3 protein_coding protein_coding MGP_129S1SvImJ_T0028053.1 MGP_129S1SvImJ_G0018038.1 mouse_genomes_project 11 6247475 6283302 - MGP_129S1SvImJ_P0028053 Sun3 protein_coding protein_coding MGP_129S1SvImJ_T0012589.1 MGP_129S1SvImJ_G0010678.1 mouse_genomes_project 11 42226200 42226490 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033827.1 MGP_129S1SvImJ_G0019454.1 mouse_genomes_project 11 122097553 122108333 - MGP_129S1SvImJ_P0033827 Tk1 protein_coding protein_coding MGP_129S1SvImJ_T0033828.1 MGP_129S1SvImJ_G0019454.1 mouse_genomes_project 11 122097651 122098896 - Tk1 protein_coding retained_intron MGP_129S1SvImJ_T0033829.1 MGP_129S1SvImJ_G0019454.1 mouse_genomes_project 11 122097932 122099666 - Tk1 protein_coding retained_intron MGP_129S1SvImJ_T0033830.1 MGP_129S1SvImJ_G0019454.1 mouse_genomes_project 11 122103881 122108078 - Tk1 protein_coding retained_intron MGP_129S1SvImJ_T0033831.1 MGP_129S1SvImJ_G0019454.1 mouse_genomes_project 11 122103959 122108108 - Tk1 protein_coding retained_intron MGP_129S1SvImJ_T0033832.1 MGP_129S1SvImJ_G0019454.1 mouse_genomes_project 11 122104699 122108088 - Tk1 protein_coding retained_intron MGP_129S1SvImJ_T0033833.1 MGP_129S1SvImJ_G0019454.1 mouse_genomes_project 11 122107075 122108058 - Tk1 protein_coding retained_intron MGP_129S1SvImJ_T0030179.1 MGP_129S1SvImJ_G0018577.1 mouse_genomes_project 11 70500177 70509694 + MGP_129S1SvImJ_P0030179 Dvl2 protein_coding protein_coding MGP_129S1SvImJ_T0030180.1 MGP_129S1SvImJ_G0018577.1 mouse_genomes_project 11 70500199 70511884 + MGP_129S1SvImJ_P0030180 Dvl2 protein_coding protein_coding MGP_129S1SvImJ_T0030181.1 MGP_129S1SvImJ_G0018577.1 mouse_genomes_project 11 70500403 70506544 + Dvl2 protein_coding retained_intron MGP_129S1SvImJ_T0030182.1 MGP_129S1SvImJ_G0018577.1 mouse_genomes_project 11 70500417 70505596 + Dvl2 protein_coding retained_intron MGP_129S1SvImJ_T0030183.1 MGP_129S1SvImJ_G0018577.1 mouse_genomes_project 11 70505040 70507056 + Dvl2 protein_coding retained_intron MGP_129S1SvImJ_T0030184.1 MGP_129S1SvImJ_G0018577.1 mouse_genomes_project 11 70506562 70507652 + Dvl2 protein_coding retained_intron MGP_129S1SvImJ_T0003192.1 MGP_129S1SvImJ_G0002964.1 mouse_genomes_project 11 55053201 55066931 + Gm12236 antisense antisense MGP_129S1SvImJ_T0100531.1 MGP_129S1SvImJ_G0038598.1 mouse_genomes_project 11 100255048 100255143 - Gm27326 snoRNA snoRNA MGP_129S1SvImJ_T0029495.1 MGP_129S1SvImJ_G0018427.1 mouse_genomes_project 11 60752318 60784340 + MGP_129S1SvImJ_P0029495 Dhrs7b protein_coding protein_coding MGP_129S1SvImJ_T0029981.1 MGP_129S1SvImJ_G0018535.1 mouse_genomes_project 11 69851039 69990499 - MGP_129S1SvImJ_P0029981 Dnah2 protein_coding protein_coding MGP_129S1SvImJ_T0029982.1 MGP_129S1SvImJ_G0018535.1 mouse_genomes_project 11 69851039 69995047 - MGP_129S1SvImJ_P0029982 Dnah2 protein_coding protein_coding MGP_129S1SvImJ_T0029983.1 MGP_129S1SvImJ_G0018535.1 mouse_genomes_project 11 69851223 69992467 - MGP_129S1SvImJ_P0029983 Dnah2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0029984.1 MGP_129S1SvImJ_G0018535.1 mouse_genomes_project 11 69904513 69905598 - Dnah2 protein_coding processed_transcript MGP_129S1SvImJ_T0029985.1 MGP_129S1SvImJ_G0018535.1 mouse_genomes_project 11 69955813 69995049 - Dnah2 protein_coding processed_transcript MGP_129S1SvImJ_T0029986.1 MGP_129S1SvImJ_G0018535.1 mouse_genomes_project 11 69961154 69961903 - Dnah2 protein_coding processed_transcript MGP_129S1SvImJ_T0033205.1 MGP_129S1SvImJ_G0019329.1 mouse_genomes_project 11 112656030 112661121 - MGP_129S1SvImJ_P0033205 E030025P04Rik protein_coding protein_coding MGP_129S1SvImJ_T0031045.1 MGP_129S1SvImJ_G0018781.1 mouse_genomes_project 11 79485613 79515927 - MGP_129S1SvImJ_P0031045 Sarm1 protein_coding protein_coding MGP_129S1SvImJ_T0031046.1 MGP_129S1SvImJ_G0018781.1 mouse_genomes_project 11 79486495 79498683 - Sarm1 protein_coding retained_intron MGP_129S1SvImJ_T0031047.1 MGP_129S1SvImJ_G0018781.1 mouse_genomes_project 11 79486573 79516212 - MGP_129S1SvImJ_P0031047 Sarm1 protein_coding protein_coding MGP_129S1SvImJ_T0031048.1 MGP_129S1SvImJ_G0018781.1 mouse_genomes_project 11 79497718 79502180 - Sarm1 protein_coding retained_intron MGP_129S1SvImJ_T0031049.1 MGP_129S1SvImJ_G0018781.1 mouse_genomes_project 11 79505839 79516144 - Sarm1 protein_coding processed_transcript MGP_129S1SvImJ_T0012666.1 MGP_129S1SvImJ_G0010755.1 mouse_genomes_project 11 70083989 70084378 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009747.1 MGP_129S1SvImJ_G0007863.1 mouse_genomes_project 11 98572523 98572625 + Mir196a-1 miRNA miRNA MGP_129S1SvImJ_T0012615.1 MGP_129S1SvImJ_G0010704.1 mouse_genomes_project 11 52886820 52887396 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029254.1 MGP_129S1SvImJ_G0018350.1 mouse_genomes_project 11 58020964 58045163 + MGP_129S1SvImJ_P0029254 Sh3bp5l protein_coding protein_coding MGP_129S1SvImJ_T0029255.1 MGP_129S1SvImJ_G0018350.1 mouse_genomes_project 11 58020990 58045160 + MGP_129S1SvImJ_P0029255 Sh3bp5l protein_coding protein_coding MGP_129S1SvImJ_T0029256.1 MGP_129S1SvImJ_G0018350.1 mouse_genomes_project 11 58021283 58021750 + Sh3bp5l protein_coding processed_transcript MGP_129S1SvImJ_T0029257.1 MGP_129S1SvImJ_G0018350.1 mouse_genomes_project 11 58021515 58045155 + Sh3bp5l protein_coding processed_transcript MGP_129S1SvImJ_T0029258.1 MGP_129S1SvImJ_G0018350.1 mouse_genomes_project 11 58042745 58044385 + Sh3bp5l protein_coding processed_transcript MGP_129S1SvImJ_T0033249.1 MGP_129S1SvImJ_G0019341.1 mouse_genomes_project 11 113623311 113702285 - MGP_129S1SvImJ_P0033249 Abca8a protein_coding protein_coding MGP_129S1SvImJ_T0033250.1 MGP_129S1SvImJ_G0019341.1 mouse_genomes_project 11 113623313 113702244 - MGP_129S1SvImJ_P0033250 Abca8a protein_coding protein_coding MGP_129S1SvImJ_T0033251.1 MGP_129S1SvImJ_G0019341.1 mouse_genomes_project 11 113623313 113702244 - MGP_129S1SvImJ_P0033251 Abca8a protein_coding protein_coding MGP_129S1SvImJ_T0033252.1 MGP_129S1SvImJ_G0019341.1 mouse_genomes_project 11 113624525 113627749 - Abca8a protein_coding processed_transcript MGP_129S1SvImJ_T0033253.1 MGP_129S1SvImJ_G0019341.1 mouse_genomes_project 11 113669160 113671655 - Abca8a protein_coding processed_transcript MGP_129S1SvImJ_T0033254.1 MGP_129S1SvImJ_G0019341.1 mouse_genomes_project 11 113675098 113676683 - Abca8a protein_coding processed_transcript MGP_129S1SvImJ_T0033255.1 MGP_129S1SvImJ_G0019341.1 mouse_genomes_project 11 113676616 113681962 - MGP_129S1SvImJ_P0033255 Abca8a protein_coding protein_coding MGP_129S1SvImJ_T0033256.1 MGP_129S1SvImJ_G0019341.1 mouse_genomes_project 11 113690468 113702244 - MGP_129S1SvImJ_P0033256 Abca8a protein_coding protein_coding MGP_129S1SvImJ_T0031502.1 MGP_129S1SvImJ_G0018905.1 mouse_genomes_project 11 89192909 89195507 + MGP_129S1SvImJ_P0031502 Gm11492 protein_coding protein_coding MGP_129S1SvImJ_T0012692.1 MGP_129S1SvImJ_G0010781.1 mouse_genomes_project 11 78026432 78027330 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011319.1 MGP_129S1SvImJ_G0009435.1 mouse_genomes_project 11 50491779 50492034 + Gm25082 misc_RNA misc_RNA MGP_129S1SvImJ_T0099265.1 MGP_129S1SvImJ_G0037332.1 mouse_genomes_project 11 84854148 84854255 + Gm23247 snRNA snRNA MGP_129S1SvImJ_T0034295.1 MGP_129S1SvImJ_G0019550.1 mouse_genomes_project 11 126000218 126169924 + MGP_129S1SvImJ_P0034295 Tbcd protein_coding protein_coding MGP_129S1SvImJ_T0034296.1 MGP_129S1SvImJ_G0019550.1 mouse_genomes_project 11 126037760 126046407 + MGP_129S1SvImJ_P0034296 Tbcd protein_coding protein_coding MGP_129S1SvImJ_T0034297.1 MGP_129S1SvImJ_G0019550.1 mouse_genomes_project 11 126049392 126129503 + MGP_129S1SvImJ_P0034297 Tbcd protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034299.1 MGP_129S1SvImJ_G0019550.1 mouse_genomes_project 11 126095953 126145013 + Tbcd protein_coding processed_transcript MGP_129S1SvImJ_T0034300.1 MGP_129S1SvImJ_G0019550.1 mouse_genomes_project 11 126101686 126144990 + Tbcd protein_coding retained_intron MGP_129S1SvImJ_T0034301.1 MGP_129S1SvImJ_G0019550.1 mouse_genomes_project 11 126152936 126169923 + Tbcd protein_coding retained_intron MGP_129S1SvImJ_T0034302.1 MGP_129S1SvImJ_G0019550.1 mouse_genomes_project 11 126156239 126169923 + Tbcd protein_coding processed_transcript MGP_129S1SvImJ_T0034303.1 MGP_129S1SvImJ_G0019550.1 mouse_genomes_project 11 126156325 126169923 + Tbcd protein_coding processed_transcript MGP_129S1SvImJ_T0012742.1 MGP_129S1SvImJ_G0010831.1 mouse_genomes_project 11 99479624 99480018 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032970.1 MGP_129S1SvImJ_G0019278.1 mouse_genomes_project 11 107782740 107842337 + MGP_129S1SvImJ_P0032970 Itgb3 protein_coding protein_coding MGP_129S1SvImJ_T0032971.1 MGP_129S1SvImJ_G0019278.1 mouse_genomes_project 11 107812093 107841669 + Itgb3 protein_coding processed_transcript MGP_129S1SvImJ_T0028958.1 MGP_129S1SvImJ_G0018273.1 mouse_genomes_project 11 50903785 50910502 + MGP_129S1SvImJ_P0028958 protein_coding protein_coding MGP_129S1SvImJ_T0028959.1 MGP_129S1SvImJ_G0018273.1 mouse_genomes_project 11 50903787 50910501 + MGP_129S1SvImJ_P0028959 protein_coding protein_coding MGP_129S1SvImJ_T0012481.1 MGP_129S1SvImJ_G0010570.1 mouse_genomes_project 11 3332641 3332985 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032493.1 MGP_129S1SvImJ_G0019186.1 mouse_genomes_project 11 104002747 104005175 - MGP_129S1SvImJ_P0032493 Ccr10 protein_coding protein_coding MGP_129S1SvImJ_T0012675.1 MGP_129S1SvImJ_G0010764.1 mouse_genomes_project 11 71324439 71324712 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011324.1 MGP_129S1SvImJ_G0009440.1 mouse_genomes_project 11 72952723 72952986 + Gm23224 misc_RNA misc_RNA MGP_129S1SvImJ_T0032663.1 MGP_129S1SvImJ_G0019220.1 mouse_genomes_project 11 105044579 105045989 - MGP_129S1SvImJ_P0032663 Ppy protein_coding protein_coding MGP_129S1SvImJ_T0032664.1 MGP_129S1SvImJ_G0019220.1 mouse_genomes_project 11 105044579 105045980 - MGP_129S1SvImJ_P0032664 Ppy protein_coding protein_coding MGP_129S1SvImJ_T0031781.1 MGP_129S1SvImJ_G0018970.1 mouse_genomes_project 11 97117025 97133784 + MGP_129S1SvImJ_P0031781 Col1a1 protein_coding protein_coding MGP_129S1SvImJ_T0031782.1 MGP_129S1SvImJ_G0018970.1 mouse_genomes_project 11 97118488 97118906 + Col1a1 protein_coding processed_transcript MGP_129S1SvImJ_T0031783.1 MGP_129S1SvImJ_G0018970.1 mouse_genomes_project 11 97119814 97120544 + Col1a1 protein_coding retained_intron MGP_129S1SvImJ_T0031784.1 MGP_129S1SvImJ_G0018970.1 mouse_genomes_project 11 97126170 97126832 + Col1a1 protein_coding retained_intron MGP_129S1SvImJ_T0029988.1 MGP_129S1SvImJ_G0018537.1 mouse_genomes_project 11 70007523 70009688 - Wrap53 protein_coding processed_transcript MGP_129S1SvImJ_T0029989.1 MGP_129S1SvImJ_G0018537.1 mouse_genomes_project 11 70007524 70026925 - MGP_129S1SvImJ_P0029989 Wrap53 protein_coding protein_coding MGP_129S1SvImJ_T0029990.1 MGP_129S1SvImJ_G0018537.1 mouse_genomes_project 11 70025308 70027856 - MGP_129S1SvImJ_P0029990 Wrap53 protein_coding protein_coding MGP_129S1SvImJ_T0012649.1 MGP_129S1SvImJ_G0010738.1 mouse_genomes_project 11 60738253 60740968 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028297.1 MGP_129S1SvImJ_G0018094.1 mouse_genomes_project 11 21836122 21865114 - MGP_129S1SvImJ_P0028297 A830031A19Rik protein_coding protein_coding MGP_129S1SvImJ_T0012716.1 MGP_129S1SvImJ_G0010805.1 mouse_genomes_project 11 87486614 87487093 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000866.1 MGP_129S1SvImJ_G0000799.1 mouse_genomes_project 11 16303269 16306437 - TEC TEC MGP_129S1SvImJ_T0012599.1 MGP_129S1SvImJ_G0010688.1 mouse_genomes_project 11 47578297 47578958 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031292.1 MGP_129S1SvImJ_G0018851.1 mouse_genomes_project 11 84844738 84855169 - MGP_129S1SvImJ_P0031292 Heatr9 protein_coding protein_coding MGP_129S1SvImJ_T0031885.1 MGP_129S1SvImJ_G0018998.1 mouse_genomes_project 11 98390267 98403094 - MGP_129S1SvImJ_P0031885 Calcoco2 protein_coding protein_coding MGP_129S1SvImJ_T0031886.1 MGP_129S1SvImJ_G0018998.1 mouse_genomes_project 11 98390803 98403092 - MGP_129S1SvImJ_P0031886 Calcoco2 protein_coding protein_coding MGP_129S1SvImJ_T0003234.1 MGP_129S1SvImJ_G0002998.1 mouse_genomes_project 11 68528758 68532719 - C78197 antisense antisense MGP_129S1SvImJ_T0032913.1 MGP_129S1SvImJ_G0019265.1 mouse_genomes_project 11 106729039 106736822 - MGP_129S1SvImJ_P0032913 Lyzl6 protein_coding protein_coding MGP_129S1SvImJ_T0032914.1 MGP_129S1SvImJ_G0019265.1 mouse_genomes_project 11 106729042 106736833 - MGP_129S1SvImJ_P0032914 Lyzl6 protein_coding protein_coding MGP_129S1SvImJ_T0032915.1 MGP_129S1SvImJ_G0019265.1 mouse_genomes_project 11 106729045 106732960 - Lyzl6 protein_coding processed_transcript MGP_129S1SvImJ_T0030775.1 MGP_129S1SvImJ_G0018725.1 mouse_genomes_project 11 76794879 76798537 + MGP_129S1SvImJ_P0030775 1700016K19Rik protein_coding protein_coding MGP_129S1SvImJ_T0030549.1 MGP_129S1SvImJ_G0018654.1 mouse_genomes_project 11 73854491 73856010 - MGP_129S1SvImJ_P0030549 Emc6 protein_coding protein_coding MGP_129S1SvImJ_T0030550.1 MGP_129S1SvImJ_G0018654.1 mouse_genomes_project 11 73855308 73855975 - MGP_129S1SvImJ_P0030550 Emc6 protein_coding protein_coding MGP_129S1SvImJ_T0028317.1 MGP_129S1SvImJ_G0018098.1 mouse_genomes_project 11 24334895 24452749 - MGP_129S1SvImJ_P0028317 Vrk2 protein_coding protein_coding MGP_129S1SvImJ_T0028318.1 MGP_129S1SvImJ_G0018098.1 mouse_genomes_project 11 24334977 24456704 - MGP_129S1SvImJ_P0028318 Vrk2 protein_coding protein_coding MGP_129S1SvImJ_T0028319.1 MGP_129S1SvImJ_G0018098.1 mouse_genomes_project 11 24402870 24456423 - Vrk2 protein_coding retained_intron MGP_129S1SvImJ_T0028320.1 MGP_129S1SvImJ_G0018098.1 mouse_genomes_project 11 24403286 24418351 - Vrk2 protein_coding processed_transcript MGP_129S1SvImJ_T0028321.1 MGP_129S1SvImJ_G0018098.1 mouse_genomes_project 11 24414380 24456707 - Vrk2 protein_coding retained_intron MGP_129S1SvImJ_T0028322.1 MGP_129S1SvImJ_G0018098.1 mouse_genomes_project 11 24416833 24456783 - MGP_129S1SvImJ_P0028322 Vrk2 protein_coding protein_coding MGP_129S1SvImJ_T0028323.1 MGP_129S1SvImJ_G0018098.1 mouse_genomes_project 11 24443352 24456404 - Vrk2 protein_coding processed_transcript MGP_129S1SvImJ_T0030813.1 MGP_129S1SvImJ_G0018733.1 mouse_genomes_project 11 77081937 77229141 - MGP_129S1SvImJ_P0030813 Nxn protein_coding protein_coding MGP_129S1SvImJ_T0030814.1 MGP_129S1SvImJ_G0018733.1 mouse_genomes_project 11 77186603 77229069 - Nxn protein_coding processed_transcript MGP_129S1SvImJ_T0012682.1 MGP_129S1SvImJ_G0010771.1 mouse_genomes_project 11 74466271 74466468 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009790.1 MGP_129S1SvImJ_G0007906.1 mouse_genomes_project 11 125942401 125942461 - Mir7236 miRNA miRNA MGP_129S1SvImJ_T0030666.1 MGP_129S1SvImJ_G0018702.1 mouse_genomes_project 11 75622095 75642611 - MGP_129S1SvImJ_P0030666 Srr protein_coding protein_coding MGP_129S1SvImJ_T0030667.1 MGP_129S1SvImJ_G0018702.1 mouse_genomes_project 11 75622245 75642488 - Srr protein_coding processed_transcript MGP_129S1SvImJ_T0030668.1 MGP_129S1SvImJ_G0018702.1 mouse_genomes_project 11 75622529 75642586 - MGP_129S1SvImJ_P0030668 Srr protein_coding protein_coding MGP_129S1SvImJ_T0030669.1 MGP_129S1SvImJ_G0018702.1 mouse_genomes_project 11 75622535 75642761 - MGP_129S1SvImJ_P0030669 Srr protein_coding protein_coding MGP_129S1SvImJ_T0030670.1 MGP_129S1SvImJ_G0018702.1 mouse_genomes_project 11 75622555 75642586 - MGP_129S1SvImJ_P0030670 Srr protein_coding protein_coding MGP_129S1SvImJ_T0030671.1 MGP_129S1SvImJ_G0018702.1 mouse_genomes_project 11 75625305 75642495 - MGP_129S1SvImJ_P0030671 Srr protein_coding protein_coding MGP_129S1SvImJ_T0030672.1 MGP_129S1SvImJ_G0018702.1 mouse_genomes_project 11 75625958 75642473 - MGP_129S1SvImJ_P0030672 Srr protein_coding protein_coding MGP_129S1SvImJ_T0030673.1 MGP_129S1SvImJ_G0018702.1 mouse_genomes_project 11 75626103 75642516 - Srr protein_coding retained_intron MGP_129S1SvImJ_T0030674.1 MGP_129S1SvImJ_G0018702.1 mouse_genomes_project 11 75626188 75642488 - Srr protein_coding retained_intron MGP_129S1SvImJ_T0030675.1 MGP_129S1SvImJ_G0018702.1 mouse_genomes_project 11 75626846 75642471 - MGP_129S1SvImJ_P0030675 Srr protein_coding protein_coding MGP_129S1SvImJ_T0009667.1 MGP_129S1SvImJ_G0007783.1 mouse_genomes_project 11 19197882 19197971 - Gm22990 miRNA miRNA MGP_129S1SvImJ_T0033640.1 MGP_129S1SvImJ_G0019418.1 mouse_genomes_project 11 120262205 120274585 - Acox1 protein_coding processed_transcript MGP_129S1SvImJ_T0033641.1 MGP_129S1SvImJ_G0019418.1 mouse_genomes_project 11 120262205 120293211 - MGP_129S1SvImJ_P0033641 Acox1 protein_coding protein_coding MGP_129S1SvImJ_T0033642.1 MGP_129S1SvImJ_G0019418.1 mouse_genomes_project 11 120262205 120281896 - MGP_129S1SvImJ_P0033642 Acox1 protein_coding protein_coding MGP_129S1SvImJ_T0033643.1 MGP_129S1SvImJ_G0019418.1 mouse_genomes_project 11 120262205 120293455 - MGP_129S1SvImJ_P0033643 Acox1 protein_coding protein_coding MGP_129S1SvImJ_T0033644.1 MGP_129S1SvImJ_G0019418.1 mouse_genomes_project 11 120265660 120272084 - Acox1 protein_coding processed_transcript MGP_129S1SvImJ_T0033645.1 MGP_129S1SvImJ_G0019418.1 mouse_genomes_project 11 120270589 120274735 - Acox1 protein_coding processed_transcript MGP_129S1SvImJ_T0033646.1 MGP_129S1SvImJ_G0019418.1 mouse_genomes_project 11 120281349 120293139 - Acox1 protein_coding processed_transcript MGP_129S1SvImJ_T0030751.1 MGP_129S1SvImJ_G0018720.1 mouse_genomes_project 11 76416120 76440627 + MGP_129S1SvImJ_P0030751 Myo1c protein_coding protein_coding MGP_129S1SvImJ_T0030752.1 MGP_129S1SvImJ_G0018720.1 mouse_genomes_project 11 76421808 76436304 + Myo1c protein_coding retained_intron MGP_129S1SvImJ_T0030753.1 MGP_129S1SvImJ_G0018720.1 mouse_genomes_project 11 76421843 76439353 + MGP_129S1SvImJ_P0030753 Myo1c protein_coding protein_coding MGP_129S1SvImJ_T0030754.1 MGP_129S1SvImJ_G0018720.1 mouse_genomes_project 11 76421857 76423293 + MGP_129S1SvImJ_P0030754 Myo1c protein_coding protein_coding MGP_129S1SvImJ_T0030755.1 MGP_129S1SvImJ_G0018720.1 mouse_genomes_project 11 76427382 76432651 + Myo1c protein_coding retained_intron MGP_129S1SvImJ_T0030756.1 MGP_129S1SvImJ_G0018720.1 mouse_genomes_project 11 76432133 76435959 + Myo1c protein_coding retained_intron MGP_129S1SvImJ_T0030757.1 MGP_129S1SvImJ_G0018720.1 mouse_genomes_project 11 76434810 76436971 + Myo1c protein_coding retained_intron MGP_129S1SvImJ_T0030758.1 MGP_129S1SvImJ_G0018720.1 mouse_genomes_project 11 76436992 76438444 + Myo1c protein_coding retained_intron MGP_129S1SvImJ_T0031145.1 MGP_129S1SvImJ_G0018809.1 mouse_genomes_project 11 81359921 81418947 + MGP_129S1SvImJ_P0031145 Rhot1 protein_coding protein_coding MGP_129S1SvImJ_T0031146.1 MGP_129S1SvImJ_G0018809.1 mouse_genomes_project 11 81359957 81420042 + MGP_129S1SvImJ_P0031146 Rhot1 protein_coding protein_coding MGP_129S1SvImJ_T0031147.1 MGP_129S1SvImJ_G0018809.1 mouse_genomes_project 11 81359986 81419621 + MGP_129S1SvImJ_P0031147 Rhot1 protein_coding protein_coding MGP_129S1SvImJ_T0031148.1 MGP_129S1SvImJ_G0018809.1 mouse_genomes_project 11 81360015 81402946 + Rhot1 protein_coding retained_intron MGP_129S1SvImJ_T0031149.1 MGP_129S1SvImJ_G0018809.1 mouse_genomes_project 11 81360021 81418902 + MGP_129S1SvImJ_P0031149 Rhot1 protein_coding protein_coding MGP_129S1SvImJ_T0031150.1 MGP_129S1SvImJ_G0018809.1 mouse_genomes_project 11 81360049 81397312 + Rhot1 protein_coding retained_intron MGP_129S1SvImJ_T0031151.1 MGP_129S1SvImJ_G0018809.1 mouse_genomes_project 11 81360189 81417994 + MGP_129S1SvImJ_P0031151 Rhot1 protein_coding protein_coding MGP_129S1SvImJ_T0031152.1 MGP_129S1SvImJ_G0018809.1 mouse_genomes_project 11 81400582 81418873 + Rhot1 protein_coding processed_transcript MGP_129S1SvImJ_T0031153.1 MGP_129S1SvImJ_G0018809.1 mouse_genomes_project 11 81403380 81405490 + Rhot1 protein_coding retained_intron MGP_129S1SvImJ_T0028388.1 MGP_129S1SvImJ_G0018112.1 mouse_genomes_project 11 27773908 28067795 - MGP_129S1SvImJ_P0028388 Eml6 protein_coding protein_coding MGP_129S1SvImJ_T0028389.1 MGP_129S1SvImJ_G0018112.1 mouse_genomes_project 11 27774994 27799501 - Eml6 protein_coding retained_intron MGP_129S1SvImJ_T0028390.1 MGP_129S1SvImJ_G0018112.1 mouse_genomes_project 11 27777509 27782395 - Eml6 protein_coding retained_intron MGP_129S1SvImJ_T0028391.1 MGP_129S1SvImJ_G0018112.1 mouse_genomes_project 11 27778324 27780448 - Eml6 protein_coding retained_intron MGP_129S1SvImJ_T0028392.1 MGP_129S1SvImJ_G0018112.1 mouse_genomes_project 11 27780885 27792392 - MGP_129S1SvImJ_P0028392 Eml6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028393.1 MGP_129S1SvImJ_G0018112.1 mouse_genomes_project 11 27839776 27840887 - Eml6 protein_coding retained_intron MGP_129S1SvImJ_T0028394.1 MGP_129S1SvImJ_G0018112.1 mouse_genomes_project 11 27847130 27859450 - MGP_129S1SvImJ_P0028394 Eml6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028447.1 MGP_129S1SvImJ_G0018127.1 mouse_genomes_project 11 30402952 30406522 + MGP_129S1SvImJ_P0028447 Snrnp25 protein_coding protein_coding MGP_129S1SvImJ_T0028448.1 MGP_129S1SvImJ_G0018127.1 mouse_genomes_project 11 30402983 30405946 + MGP_129S1SvImJ_P0028448 Snrnp25 protein_coding protein_coding MGP_129S1SvImJ_T0028449.1 MGP_129S1SvImJ_G0018127.1 mouse_genomes_project 11 30402995 30405189 + Snrnp25 protein_coding processed_transcript MGP_129S1SvImJ_T0028450.1 MGP_129S1SvImJ_G0018127.1 mouse_genomes_project 11 30403025 30406411 + MGP_129S1SvImJ_P0028450 Snrnp25 protein_coding protein_coding MGP_129S1SvImJ_T0028451.1 MGP_129S1SvImJ_G0018127.1 mouse_genomes_project 11 30404299 30406522 + Snrnp25 protein_coding retained_intron MGP_129S1SvImJ_T0031491.1 MGP_129S1SvImJ_G0018902.1 mouse_genomes_project 11 88809038 88948993 - MGP_129S1SvImJ_P0031491 Ppm1e protein_coding protein_coding MGP_129S1SvImJ_T0031492.1 MGP_129S1SvImJ_G0018902.1 mouse_genomes_project 11 88825202 88948607 - Ppm1e protein_coding processed_transcript MGP_129S1SvImJ_T0028913.1 MGP_129S1SvImJ_G0018261.1 mouse_genomes_project 11 50185318 50186381 + MGP_129S1SvImJ_P0028913 Olfr1377 protein_coding protein_coding MGP_129S1SvImJ_T0012637.1 MGP_129S1SvImJ_G0010726.1 mouse_genomes_project 11 58118752 58119467 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099274.1 MGP_129S1SvImJ_G0037341.1 mouse_genomes_project 11 90662955 90663062 + Gm23507 snRNA snRNA MGP_129S1SvImJ_T0027996.1 MGP_129S1SvImJ_G0018024.1 mouse_genomes_project 11 3590234 3598453 - MGP_129S1SvImJ_P0027996 Purb protein_coding protein_coding MGP_129S1SvImJ_T0027922.1 MGP_129S1SvImJ_G0018006.1 mouse_genomes_project 11 2870071 2883564 + MGP_129S1SvImJ_P0027922 Dbnl protein_coding protein_coding MGP_129S1SvImJ_T0027923.1 MGP_129S1SvImJ_G0018006.1 mouse_genomes_project 11 2870105 2883222 + MGP_129S1SvImJ_P0027923 Dbnl protein_coding protein_coding MGP_129S1SvImJ_T0027924.1 MGP_129S1SvImJ_G0018006.1 mouse_genomes_project 11 2870113 2883897 + MGP_129S1SvImJ_P0027924 Dbnl protein_coding protein_coding MGP_129S1SvImJ_T0012755.1 MGP_129S1SvImJ_G0010844.1 mouse_genomes_project 11 104878793 104879192 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012644.1 MGP_129S1SvImJ_G0010733.1 mouse_genomes_project 11 59424566 59425211 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003344.1 MGP_129S1SvImJ_G0003087.1 mouse_genomes_project 11 110804897 110808057 + Gm11713 antisense antisense MGP_129S1SvImJ_T0028628.1 MGP_129S1SvImJ_G0018174.1 mouse_genomes_project 11 42297260 42363526 + MGP_129S1SvImJ_P0028628 Ccnjl protein_coding protein_coding MGP_129S1SvImJ_T0028629.1 MGP_129S1SvImJ_G0018174.1 mouse_genomes_project 11 42297722 42326215 + Ccnjl protein_coding processed_transcript MGP_129S1SvImJ_T0032615.1 MGP_129S1SvImJ_G0019211.1 mouse_genomes_project 11 104649794 104652571 + Dhx8 protein_coding retained_intron MGP_129S1SvImJ_T0032616.1 MGP_129S1SvImJ_G0019211.1 mouse_genomes_project 11 104649825 104689693 + MGP_129S1SvImJ_P0032616 Dhx8 protein_coding protein_coding MGP_129S1SvImJ_T0032617.1 MGP_129S1SvImJ_G0019211.1 mouse_genomes_project 11 104649904 104651313 + Dhx8 protein_coding retained_intron MGP_129S1SvImJ_T0032618.1 MGP_129S1SvImJ_G0019211.1 mouse_genomes_project 11 104649916 104689142 + MGP_129S1SvImJ_P0032618 Dhx8 protein_coding protein_coding MGP_129S1SvImJ_T0032619.1 MGP_129S1SvImJ_G0019211.1 mouse_genomes_project 11 104671169 104672565 + Dhx8 protein_coding retained_intron MGP_129S1SvImJ_T0012685.1 MGP_129S1SvImJ_G0010774.1 mouse_genomes_project 11 75003664 75004586 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028406.1 MGP_129S1SvImJ_G0018116.1 mouse_genomes_project 11 28881927 28995021 + MGP_129S1SvImJ_P0028406 Psme4 protein_coding protein_coding MGP_129S1SvImJ_T0028407.1 MGP_129S1SvImJ_G0018116.1 mouse_genomes_project 11 28882522 28917824 + MGP_129S1SvImJ_P0028407 Psme4 protein_coding protein_coding MGP_129S1SvImJ_T0028408.1 MGP_129S1SvImJ_G0018116.1 mouse_genomes_project 11 28925160 28927353 + Psme4 protein_coding processed_transcript MGP_129S1SvImJ_T0028409.1 MGP_129S1SvImJ_G0018116.1 mouse_genomes_project 11 28943717 28947764 + Psme4 protein_coding processed_transcript MGP_129S1SvImJ_T0028410.1 MGP_129S1SvImJ_G0018116.1 mouse_genomes_project 11 28945998 28946667 + Psme4 protein_coding processed_transcript MGP_129S1SvImJ_T0028411.1 MGP_129S1SvImJ_G0018116.1 mouse_genomes_project 11 28967487 28971850 + MGP_129S1SvImJ_P0028411 Psme4 protein_coding protein_coding MGP_129S1SvImJ_T0028412.1 MGP_129S1SvImJ_G0018116.1 mouse_genomes_project 11 28982317 28988864 + Psme4 protein_coding processed_transcript MGP_129S1SvImJ_T0006192.1 MGP_129S1SvImJ_G0005172.1 mouse_genomes_project 11 15527988 15537167 + Gm12018 lincRNA lincRNA MGP_129S1SvImJ_T0032255.1 MGP_129S1SvImJ_G0019088.1 mouse_genomes_project 11 101987618 101998546 - Krt26 protein_coding processed_transcript MGP_129S1SvImJ_T0032256.1 MGP_129S1SvImJ_G0019088.1 mouse_genomes_project 11 101987682 101998547 - MGP_129S1SvImJ_P0032256 Krt26 protein_coding protein_coding MGP_129S1SvImJ_T0017289.1 MGP_129S1SvImJ_G0015211.1 mouse_genomes_project 11 106800764 106806988 + C130046K22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017290.1 MGP_129S1SvImJ_G0015211.1 mouse_genomes_project 11 106800764 106826781 + C130046K22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0033231.1 MGP_129S1SvImJ_G0019336.1 mouse_genomes_project 11 113140355 113183726 - MGP_129S1SvImJ_P0033231 Wipi1 protein_coding protein_coding MGP_129S1SvImJ_T0033232.1 MGP_129S1SvImJ_G0019336.1 mouse_genomes_project 11 113142153 113183726 - MGP_129S1SvImJ_P0033232 Wipi1 protein_coding protein_coding MGP_129S1SvImJ_T0033233.1 MGP_129S1SvImJ_G0019336.1 mouse_genomes_project 11 113149093 113183726 - MGP_129S1SvImJ_P0033233 Wipi1 protein_coding protein_coding MGP_129S1SvImJ_T0033234.1 MGP_129S1SvImJ_G0019336.1 mouse_genomes_project 11 113183532 113184261 - Wipi1 protein_coding processed_transcript MGP_129S1SvImJ_T0012715.1 MGP_129S1SvImJ_G0010804.1 mouse_genomes_project 11 86591713 86592381 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003164.1 MGP_129S1SvImJ_G0002939.1 mouse_genomes_project 11 41978017 41980720 - Gm12144 antisense antisense MGP_129S1SvImJ_T0012659.1 MGP_129S1SvImJ_G0010748.1 mouse_genomes_project 11 63944210 63945492 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029482.1 MGP_129S1SvImJ_G0018425.1 mouse_genomes_project 11 60696419 60699964 + MGP_129S1SvImJ_P0029482 Smcr8 protein_coding protein_coding MGP_129S1SvImJ_T0029483.1 MGP_129S1SvImJ_G0018425.1 mouse_genomes_project 11 60696420 60707221 + MGP_129S1SvImJ_P0029483 Smcr8 protein_coding protein_coding MGP_129S1SvImJ_T0027947.1 MGP_129S1SvImJ_G0018014.1 mouse_genomes_project 11 3064159 3157196 - MGP_129S1SvImJ_P0027947 Camk2b protein_coding protein_coding MGP_129S1SvImJ_T0027948.1 MGP_129S1SvImJ_G0018014.1 mouse_genomes_project 11 3064183 3078639 - Camk2b protein_coding processed_transcript MGP_129S1SvImJ_T0027949.1 MGP_129S1SvImJ_G0018014.1 mouse_genomes_project 11 3064187 3157011 - MGP_129S1SvImJ_P0027949 Camk2b protein_coding protein_coding MGP_129S1SvImJ_T0027950.1 MGP_129S1SvImJ_G0018014.1 mouse_genomes_project 11 3064187 3157196 - MGP_129S1SvImJ_P0027950 Camk2b protein_coding protein_coding MGP_129S1SvImJ_T0027951.1 MGP_129S1SvImJ_G0018014.1 mouse_genomes_project 11 3066068 3157011 - MGP_129S1SvImJ_P0027951 Camk2b protein_coding protein_coding MGP_129S1SvImJ_T0027952.1 MGP_129S1SvImJ_G0018014.1 mouse_genomes_project 11 3066169 3157030 - MGP_129S1SvImJ_P0027952 Camk2b protein_coding protein_coding MGP_129S1SvImJ_T0027953.1 MGP_129S1SvImJ_G0018014.1 mouse_genomes_project 11 3066172 3157190 - MGP_129S1SvImJ_P0027953 Camk2b protein_coding protein_coding MGP_129S1SvImJ_T0027954.1 MGP_129S1SvImJ_G0018014.1 mouse_genomes_project 11 3066172 3156993 - MGP_129S1SvImJ_P0027954 Camk2b protein_coding protein_coding MGP_129S1SvImJ_T0027955.1 MGP_129S1SvImJ_G0018014.1 mouse_genomes_project 11 3066180 3157060 - MGP_129S1SvImJ_P0027955 Camk2b protein_coding protein_coding MGP_129S1SvImJ_T0027956.1 MGP_129S1SvImJ_G0018014.1 mouse_genomes_project 11 3066235 3156986 - MGP_129S1SvImJ_P0027956 Camk2b protein_coding protein_coding MGP_129S1SvImJ_T0027957.1 MGP_129S1SvImJ_G0018014.1 mouse_genomes_project 11 3066717 3157018 - MGP_129S1SvImJ_P0027957 Camk2b protein_coding protein_coding MGP_129S1SvImJ_T0027958.1 MGP_129S1SvImJ_G0018014.1 mouse_genomes_project 11 3082600 3156986 - Camk2b protein_coding processed_transcript MGP_129S1SvImJ_T0027959.1 MGP_129S1SvImJ_G0018014.1 mouse_genomes_project 11 3084894 3094833 - Camk2b protein_coding processed_transcript MGP_129S1SvImJ_T0027960.1 MGP_129S1SvImJ_G0018014.1 mouse_genomes_project 11 3087331 3157810 - Camk2b protein_coding processed_transcript MGP_129S1SvImJ_T0027961.1 MGP_129S1SvImJ_G0018014.1 mouse_genomes_project 11 3100213 3157106 - Camk2b protein_coding processed_transcript MGP_129S1SvImJ_T0033680.1 MGP_129S1SvImJ_G0019426.1 mouse_genomes_project 11 120541520 120548608 + MGP_129S1SvImJ_P0033680 protein_coding protein_coding MGP_129S1SvImJ_T0033682.1 MGP_129S1SvImJ_G0019426.1 mouse_genomes_project 11 120542189 120547756 + protein_coding processed_transcript MGP_129S1SvImJ_T0012500.1 MGP_129S1SvImJ_G0010589.1 mouse_genomes_project 11 11490621 11491839 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003211.1 MGP_129S1SvImJ_G0002980.1 mouse_genomes_project 11 62523743 62545513 + Gm12278 antisense antisense MGP_129S1SvImJ_T0027845.1 MGP_129S1SvImJ_G0017991.1 mouse_genomes_project 11 1893710 1938352 + MGP_129S1SvImJ_P0027845 Thoc5 protein_coding protein_coding MGP_129S1SvImJ_T0027846.1 MGP_129S1SvImJ_G0017991.1 mouse_genomes_project 11 1893733 1938350 + MGP_129S1SvImJ_P0027846 Thoc5 protein_coding protein_coding MGP_129S1SvImJ_T0027847.1 MGP_129S1SvImJ_G0017991.1 mouse_genomes_project 11 1900453 1922018 + Thoc5 protein_coding processed_transcript MGP_129S1SvImJ_T0027848.1 MGP_129S1SvImJ_G0017991.1 mouse_genomes_project 11 1900453 1902707 + Thoc5 protein_coding processed_transcript MGP_129S1SvImJ_T0027849.1 MGP_129S1SvImJ_G0017991.1 mouse_genomes_project 11 1900453 1925943 + MGP_129S1SvImJ_P0027849 Thoc5 protein_coding protein_coding MGP_129S1SvImJ_T0027850.1 MGP_129S1SvImJ_G0017991.1 mouse_genomes_project 11 1923013 1929970 + Thoc5 protein_coding processed_transcript MGP_129S1SvImJ_T0031765.1 MGP_129S1SvImJ_G0018965.1 mouse_genomes_project 11 96762638 96772359 + MGP_129S1SvImJ_P0031765 Mrpl27 protein_coding protein_coding MGP_129S1SvImJ_T0031766.1 MGP_129S1SvImJ_G0018965.1 mouse_genomes_project 11 96762647 96772188 + Mrpl27 protein_coding processed_transcript MGP_129S1SvImJ_T0031767.1 MGP_129S1SvImJ_G0018965.1 mouse_genomes_project 11 96762882 96769881 + Mrpl27 protein_coding processed_transcript MGP_129S1SvImJ_T0031768.1 MGP_129S1SvImJ_G0018965.1 mouse_genomes_project 11 96762902 96769977 + Mrpl27 protein_coding processed_transcript MGP_129S1SvImJ_T0012508.1 MGP_129S1SvImJ_G0010597.1 mouse_genomes_project 11 13890689 13896441 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009728.1 MGP_129S1SvImJ_G0007844.1 mouse_genomes_project 11 77946722 77946831 - Mir423 miRNA miRNA MGP_129S1SvImJ_T0032420.1 MGP_129S1SvImJ_G0019169.1 mouse_genomes_project 11 103533471 103535331 - MGP_129S1SvImJ_P0032420 Hcrt protein_coding protein_coding MGP_129S1SvImJ_T0032421.1 MGP_129S1SvImJ_G0019169.1 mouse_genomes_project 11 103534093 103535334 - MGP_129S1SvImJ_P0032421 Hcrt protein_coding protein_coding MGP_129S1SvImJ_T0033798.1 MGP_129S1SvImJ_G0019447.1 mouse_genomes_project 11 121737693 121742339 + MGP_129S1SvImJ_P0033798 Gm11733 protein_coding protein_coding MGP_129S1SvImJ_T0034208.1 MGP_129S1SvImJ_G0019530.1 mouse_genomes_project 11 125288215 125295418 - MGP_129S1SvImJ_P0034208 Dus1l protein_coding protein_coding MGP_129S1SvImJ_T0034209.1 MGP_129S1SvImJ_G0019530.1 mouse_genomes_project 11 125288216 125289462 - Dus1l protein_coding retained_intron MGP_129S1SvImJ_T0034210.1 MGP_129S1SvImJ_G0019530.1 mouse_genomes_project 11 125288216 125295410 - MGP_129S1SvImJ_P0034210 Dus1l protein_coding protein_coding MGP_129S1SvImJ_T0034211.1 MGP_129S1SvImJ_G0019530.1 mouse_genomes_project 11 125288216 125295410 - MGP_129S1SvImJ_P0034211 Dus1l protein_coding protein_coding MGP_129S1SvImJ_T0034212.1 MGP_129S1SvImJ_G0019530.1 mouse_genomes_project 11 125288218 125288865 - Dus1l protein_coding retained_intron MGP_129S1SvImJ_T0034213.1 MGP_129S1SvImJ_G0019530.1 mouse_genomes_project 11 125288220 125295404 - Dus1l protein_coding retained_intron MGP_129S1SvImJ_T0034214.1 MGP_129S1SvImJ_G0019530.1 mouse_genomes_project 11 125288220 125295413 - MGP_129S1SvImJ_P0034214 Dus1l protein_coding protein_coding MGP_129S1SvImJ_T0034215.1 MGP_129S1SvImJ_G0019530.1 mouse_genomes_project 11 125291788 125295392 - MGP_129S1SvImJ_P0034215 Dus1l protein_coding protein_coding MGP_129S1SvImJ_T0034216.1 MGP_129S1SvImJ_G0019530.1 mouse_genomes_project 11 125292859 125295408 - MGP_129S1SvImJ_P0034216 Dus1l protein_coding protein_coding MGP_129S1SvImJ_T0033482.1 MGP_129S1SvImJ_G0019394.1 mouse_genomes_project 11 119624616 119646929 - MGP_129S1SvImJ_P0033482 Gga3 protein_coding protein_coding MGP_129S1SvImJ_T0033483.1 MGP_129S1SvImJ_G0019394.1 mouse_genomes_project 11 119624616 119646929 - MGP_129S1SvImJ_P0033483 Gga3 protein_coding protein_coding MGP_129S1SvImJ_T0033484.1 MGP_129S1SvImJ_G0019394.1 mouse_genomes_project 11 119624616 119646929 - MGP_129S1SvImJ_P0033484 Gga3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033485.1 MGP_129S1SvImJ_G0019394.1 mouse_genomes_project 11 119624725 119629666 - Gga3 protein_coding processed_transcript MGP_129S1SvImJ_T0033486.1 MGP_129S1SvImJ_G0019394.1 mouse_genomes_project 11 119626065 119629417 - Gga3 protein_coding processed_transcript MGP_129S1SvImJ_T0033487.1 MGP_129S1SvImJ_G0019394.1 mouse_genomes_project 11 119626148 119646762 - Gga3 protein_coding processed_transcript MGP_129S1SvImJ_T0033488.1 MGP_129S1SvImJ_G0019394.1 mouse_genomes_project 11 119627946 119628389 - Gga3 protein_coding processed_transcript MGP_129S1SvImJ_T0033489.1 MGP_129S1SvImJ_G0019394.1 mouse_genomes_project 11 119628297 119646754 - Gga3 protein_coding processed_transcript MGP_129S1SvImJ_T0033490.1 MGP_129S1SvImJ_G0019394.1 mouse_genomes_project 11 119628838 119646766 - Gga3 protein_coding processed_transcript MGP_129S1SvImJ_T0033491.1 MGP_129S1SvImJ_G0019394.1 mouse_genomes_project 11 119631786 119646771 - MGP_129S1SvImJ_P0033491 Gga3 protein_coding protein_coding MGP_129S1SvImJ_T0033492.1 MGP_129S1SvImJ_G0019394.1 mouse_genomes_project 11 119632643 119646602 - Gga3 protein_coding processed_transcript MGP_129S1SvImJ_T0033493.1 MGP_129S1SvImJ_G0019394.1 mouse_genomes_project 11 119632661 119646758 - Gga3 protein_coding processed_transcript MGP_129S1SvImJ_T0099263.1 MGP_129S1SvImJ_G0037330.1 mouse_genomes_project 11 83858374 83858481 - Gm24612 snRNA snRNA MGP_129S1SvImJ_T0012490.1 MGP_129S1SvImJ_G0010579.1 mouse_genomes_project 11 4023476 4024242 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012677.1 MGP_129S1SvImJ_G0010766.1 mouse_genomes_project 11 71633989 71634793 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003151.1 MGP_129S1SvImJ_G0002927.1 mouse_genomes_project 11 21678758 21679687 + Gm12061 antisense antisense MGP_129S1SvImJ_T0029287.1 MGP_129S1SvImJ_G0018368.1 mouse_genomes_project 11 58439776 58440742 + MGP_129S1SvImJ_P0029287 protein_coding protein_coding MGP_129S1SvImJ_T0032724.1 MGP_129S1SvImJ_G0019231.1 mouse_genomes_project 11 105265837 105282706 - MGP_129S1SvImJ_P0032724 Ubtf protein_coding protein_coding MGP_129S1SvImJ_T0032725.1 MGP_129S1SvImJ_G0019231.1 mouse_genomes_project 11 105265838 105282706 - MGP_129S1SvImJ_P0032725 Ubtf protein_coding protein_coding MGP_129S1SvImJ_T0032726.1 MGP_129S1SvImJ_G0019231.1 mouse_genomes_project 11 105267349 105279073 - MGP_129S1SvImJ_P0032726 Ubtf protein_coding protein_coding MGP_129S1SvImJ_T0032727.1 MGP_129S1SvImJ_G0019231.1 mouse_genomes_project 11 105267349 105282706 - MGP_129S1SvImJ_P0032727 Ubtf protein_coding protein_coding MGP_129S1SvImJ_T0032728.1 MGP_129S1SvImJ_G0019231.1 mouse_genomes_project 11 105267349 105280255 - MGP_129S1SvImJ_P0032728 Ubtf protein_coding protein_coding MGP_129S1SvImJ_T0032729.1 MGP_129S1SvImJ_G0019231.1 mouse_genomes_project 11 105267349 105279097 - MGP_129S1SvImJ_P0032729 Ubtf protein_coding protein_coding MGP_129S1SvImJ_T0032730.1 MGP_129S1SvImJ_G0019231.1 mouse_genomes_project 11 105267418 105279701 - MGP_129S1SvImJ_P0032730 Ubtf protein_coding protein_coding MGP_129S1SvImJ_T0032731.1 MGP_129S1SvImJ_G0019231.1 mouse_genomes_project 11 105267721 105280049 - MGP_129S1SvImJ_P0032731 Ubtf protein_coding protein_coding MGP_129S1SvImJ_T0032732.1 MGP_129S1SvImJ_G0019231.1 mouse_genomes_project 11 105267907 105283342 - MGP_129S1SvImJ_P0032732 Ubtf protein_coding protein_coding MGP_129S1SvImJ_T0032733.1 MGP_129S1SvImJ_G0019231.1 mouse_genomes_project 11 105269957 105271836 - Ubtf protein_coding retained_intron MGP_129S1SvImJ_T0032734.1 MGP_129S1SvImJ_G0019231.1 mouse_genomes_project 11 105271435 105272304 - Ubtf protein_coding retained_intron MGP_129S1SvImJ_T0032735.1 MGP_129S1SvImJ_G0019231.1 mouse_genomes_project 11 105274150 105279068 - MGP_129S1SvImJ_P0032735 Ubtf protein_coding protein_coding MGP_129S1SvImJ_T0032736.1 MGP_129S1SvImJ_G0019231.1 mouse_genomes_project 11 105276004 105279098 - MGP_129S1SvImJ_P0032736 Ubtf protein_coding protein_coding MGP_129S1SvImJ_T0012584.1 MGP_129S1SvImJ_G0010673.1 mouse_genomes_project 11 39234763 39235972 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028573.1 MGP_129S1SvImJ_G0018161.1 mouse_genomes_project 11 39361937 39399923 - MGP_129S1SvImJ_P0028573 Hmmr protein_coding protein_coding MGP_129S1SvImJ_T0028574.1 MGP_129S1SvImJ_G0018161.1 mouse_genomes_project 11 39363381 39399860 - MGP_129S1SvImJ_P0028574 Hmmr protein_coding unknown_likely_coding MGP_129S1SvImJ_T0028575.1 MGP_129S1SvImJ_G0018161.1 mouse_genomes_project 11 39384791 39399917 - Hmmr protein_coding processed_transcript MGP_129S1SvImJ_T0028576.1 MGP_129S1SvImJ_G0018161.1 mouse_genomes_project 11 39386754 39399917 - Hmmr protein_coding processed_transcript MGP_129S1SvImJ_T0028577.1 MGP_129S1SvImJ_G0018161.1 mouse_genomes_project 11 39388675 39399892 - Hmmr protein_coding processed_transcript MGP_129S1SvImJ_T0030609.1 MGP_129S1SvImJ_G0018684.1 mouse_genomes_project 11 74759290 74778185 + MGP_129S1SvImJ_P0030609 protein_coding protein_coding MGP_129S1SvImJ_T0030610.1 MGP_129S1SvImJ_G0018684.1 mouse_genomes_project 11 74759290 74773883 + MGP_129S1SvImJ_P0030610 protein_coding protein_coding MGP_129S1SvImJ_T0030611.1 MGP_129S1SvImJ_G0018684.1 mouse_genomes_project 11 74759500 74773104 + protein_coding processed_transcript MGP_129S1SvImJ_T0030612.1 MGP_129S1SvImJ_G0018684.1 mouse_genomes_project 11 74759520 74772832 + MGP_129S1SvImJ_P0030612 protein_coding protein_coding MGP_129S1SvImJ_T0017217.1 MGP_129S1SvImJ_G0015170.1 mouse_genomes_project 11 52957699 52960317 - A430108G06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017218.1 MGP_129S1SvImJ_G0015170.1 mouse_genomes_project 11 52957775 52960325 - A430108G06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0032020.1 MGP_129S1SvImJ_G0019032.1 mouse_genomes_project 11 99924441 99933983 - MGP_129S1SvImJ_P0032020 4933428G20Rik protein_coding protein_coding MGP_129S1SvImJ_T0033821.1 MGP_129S1SvImJ_G0019452.1 mouse_genomes_project 11 122091678 122124023 + MGP_129S1SvImJ_P0033821 Gm20708 protein_coding protein_coding MGP_129S1SvImJ_T0017238.1 MGP_129S1SvImJ_G0015181.1 mouse_genomes_project 11 69763083 69766568 + processed_transcript processed_transcript MGP_129S1SvImJ_T0017239.1 MGP_129S1SvImJ_G0015181.1 mouse_genomes_project 11 69763490 69765299 + processed_transcript processed_transcript MGP_129S1SvImJ_T0031906.1 MGP_129S1SvImJ_G0019008.1 mouse_genomes_project 11 98663613 98666778 + Hoxb2 protein_coding retained_intron MGP_129S1SvImJ_T0031907.1 MGP_129S1SvImJ_G0019008.1 mouse_genomes_project 11 98664719 98667132 + MGP_129S1SvImJ_P0031907 Hoxb2 protein_coding protein_coding MGP_129S1SvImJ_T0030284.1 MGP_129S1SvImJ_G0018598.1 mouse_genomes_project 11 71040136 71046069 + MGP_129S1SvImJ_P0030284 Tm4sf5 protein_coding protein_coding MGP_129S1SvImJ_T0030285.1 MGP_129S1SvImJ_G0018598.1 mouse_genomes_project 11 71044860 71045773 + Tm4sf5 protein_coding processed_transcript MGP_129S1SvImJ_T0030286.1 MGP_129S1SvImJ_G0018598.1 mouse_genomes_project 11 71045096 71045858 + Tm4sf5 protein_coding retained_intron MGP_129S1SvImJ_T0030608.1 MGP_129S1SvImJ_G0018683.1 mouse_genomes_project 11 74743555 74744558 - MGP_129S1SvImJ_P0030608 Olfr399 protein_coding protein_coding MGP_129S1SvImJ_T0027773.1 MGP_129S1SvImJ_G0017974.1 mouse_genomes_project 11 1020336 1046975 - MGP_129S1SvImJ_P0027773 Sec14l2 protein_coding protein_coding MGP_129S1SvImJ_T0027774.1 MGP_129S1SvImJ_G0017974.1 mouse_genomes_project 11 1021072 1046840 - Sec14l2 protein_coding processed_transcript MGP_129S1SvImJ_T0027775.1 MGP_129S1SvImJ_G0017974.1 mouse_genomes_project 11 1021072 1034628 - Sec14l2 protein_coding processed_transcript MGP_129S1SvImJ_T0027776.1 MGP_129S1SvImJ_G0017974.1 mouse_genomes_project 11 1028539 1034378 - Sec14l2 protein_coding processed_transcript MGP_129S1SvImJ_T0027777.1 MGP_129S1SvImJ_G0017974.1 mouse_genomes_project 11 1036523 1051559 - Sec14l2 protein_coding processed_transcript MGP_129S1SvImJ_T0027778.1 MGP_129S1SvImJ_G0017974.1 mouse_genomes_project 11 1044600 1046897 - Sec14l2 protein_coding processed_transcript MGP_129S1SvImJ_T0017175.1 MGP_129S1SvImJ_G0015148.1 mouse_genomes_project 11 404376 410648 + Gm11946 processed_transcript processed_transcript MGP_129S1SvImJ_T0017176.1 MGP_129S1SvImJ_G0015148.1 mouse_genomes_project 11 405167 411070 + Gm11946 processed_transcript processed_transcript MGP_129S1SvImJ_T0032632.1 MGP_129S1SvImJ_G0019213.1 mouse_genomes_project 11 104807382 104827204 - MGP_129S1SvImJ_P0032632 Meox1 protein_coding protein_coding MGP_129S1SvImJ_T0034251.1 MGP_129S1SvImJ_G0019537.1 mouse_genomes_project 11 125598030 125608911 - MGP_129S1SvImJ_P0034251 Sectm1a protein_coding protein_coding MGP_129S1SvImJ_T0034252.1 MGP_129S1SvImJ_G0019537.1 mouse_genomes_project 11 125598030 125608830 - MGP_129S1SvImJ_P0034252 Sectm1a protein_coding protein_coding MGP_129S1SvImJ_T0034253.1 MGP_129S1SvImJ_G0019537.1 mouse_genomes_project 11 125598540 125608827 - MGP_129S1SvImJ_P0034253 Sectm1a protein_coding protein_coding MGP_129S1SvImJ_T0034254.1 MGP_129S1SvImJ_G0019537.1 mouse_genomes_project 11 125598558 125608821 - MGP_129S1SvImJ_P0034254 Sectm1a protein_coding protein_coding MGP_129S1SvImJ_T0034255.1 MGP_129S1SvImJ_G0019537.1 mouse_genomes_project 11 125599659 125608816 - Sectm1a protein_coding processed_transcript MGP_129S1SvImJ_T0030472.1 MGP_129S1SvImJ_G0018634.1 mouse_genomes_project 11 72860019 72884747 - MGP_129S1SvImJ_P0030472 Slc13a5 protein_coding protein_coding MGP_129S1SvImJ_T0030473.1 MGP_129S1SvImJ_G0018634.1 mouse_genomes_project 11 72878478 72884747 - MGP_129S1SvImJ_P0030473 Slc13a5 protein_coding protein_coding MGP_129S1SvImJ_T0030474.1 MGP_129S1SvImJ_G0018634.1 mouse_genomes_project 11 72879783 72885356 - MGP_129S1SvImJ_P0030474 Slc13a5 protein_coding protein_coding MGP_129S1SvImJ_T0012731.1 MGP_129S1SvImJ_G0010820.1 mouse_genomes_project 11 95671499 95672710 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0030287.1 MGP_129S1SvImJ_G0018599.1 mouse_genomes_project 11 71048366 71049467 - MGP_129S1SvImJ_P0030287 Vmo1 protein_coding protein_coding MGP_129S1SvImJ_T0003361.1 MGP_129S1SvImJ_G0003100.1 mouse_genomes_project 11 120001620 120003867 + antisense antisense MGP_129S1SvImJ_T0028462.1 MGP_129S1SvImJ_G0018130.1 mouse_genomes_project 11 30424042 30429560 + MGP_129S1SvImJ_P0028462 Mpg protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028463.1 MGP_129S1SvImJ_G0018130.1 mouse_genomes_project 11 30424048 30430238 + MGP_129S1SvImJ_P0028463 Mpg protein_coding protein_coding MGP_129S1SvImJ_T0028464.1 MGP_129S1SvImJ_G0018130.1 mouse_genomes_project 11 30424067 30425935 + Mpg protein_coding retained_intron MGP_129S1SvImJ_T0028465.1 MGP_129S1SvImJ_G0018130.1 mouse_genomes_project 11 30424076 30428782 + MGP_129S1SvImJ_P0028465 Mpg protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0009696.1 MGP_129S1SvImJ_G0007812.1 mouse_genomes_project 11 59165933 59166029 - Gm24756 miRNA miRNA MGP_129S1SvImJ_T0000870.1 MGP_129S1SvImJ_G0000803.1 mouse_genomes_project 11 29846069 29846434 + TEC TEC MGP_129S1SvImJ_T0029044.1 MGP_129S1SvImJ_G0018296.1 mouse_genomes_project 11 52862518 52866220 - MGP_129S1SvImJ_P0029044 Sowaha protein_coding protein_coding MGP_129S1SvImJ_T0027737.1 MGP_129S1SvImJ_G0017965.1 mouse_genomes_project 11 805400 810637 + MGP_129S1SvImJ_P0027737 Dusp18 protein_coding protein_coding MGP_129S1SvImJ_T0027738.1 MGP_129S1SvImJ_G0017965.1 mouse_genomes_project 11 805400 812579 + MGP_129S1SvImJ_P0027738 Dusp18 protein_coding protein_coding MGP_129S1SvImJ_T0009725.1 MGP_129S1SvImJ_G0007841.1 mouse_genomes_project 11 76063579 76063694 - miRNA miRNA MGP_129S1SvImJ_T0029997.1 MGP_129S1SvImJ_G0018539.1 mouse_genomes_project 11 70048346 70054440 - MGP_129S1SvImJ_P0029997 Atp1b2 protein_coding protein_coding MGP_129S1SvImJ_T0029998.1 MGP_129S1SvImJ_G0018539.1 mouse_genomes_project 11 70048351 70054553 - Atp1b2 protein_coding processed_transcript MGP_129S1SvImJ_T0029999.1 MGP_129S1SvImJ_G0018539.1 mouse_genomes_project 11 70049276 70051352 - MGP_129S1SvImJ_P0029999 Atp1b2 protein_coding protein_coding MGP_129S1SvImJ_T0030000.1 MGP_129S1SvImJ_G0018539.1 mouse_genomes_project 11 70049968 70052224 - Atp1b2 protein_coding processed_transcript MGP_129S1SvImJ_T0030001.1 MGP_129S1SvImJ_G0018539.1 mouse_genomes_project 11 70050754 70051773 - Atp1b2 protein_coding processed_transcript MGP_129S1SvImJ_T0031879.1 MGP_129S1SvImJ_G0018996.1 mouse_genomes_project 11 98322526 98342361 - MGP_129S1SvImJ_P0031879 Ube2z protein_coding protein_coding MGP_129S1SvImJ_T0003199.1 MGP_129S1SvImJ_G0002971.1 mouse_genomes_project 11 58784593 58789151 + Gm10435 antisense antisense MGP_129S1SvImJ_T0003200.1 MGP_129S1SvImJ_G0002971.1 mouse_genomes_project 11 58784593 58789151 + Gm10435 antisense antisense MGP_129S1SvImJ_T0028863.1 MGP_129S1SvImJ_G0018248.1 mouse_genomes_project 11 49530890 49536128 + MGP_129S1SvImJ_P0028863 Cby3 protein_coding protein_coding MGP_129S1SvImJ_T0028864.1 MGP_129S1SvImJ_G0018248.1 mouse_genomes_project 11 49534189 49536128 + MGP_129S1SvImJ_P0028864 Cby3 protein_coding protein_coding MGP_129S1SvImJ_T0028848.1 MGP_129S1SvImJ_G0018244.1 mouse_genomes_project 11 49377255 49399754 + MGP_129S1SvImJ_P0028848 Mgat4b protein_coding protein_coding MGP_129S1SvImJ_T0028849.1 MGP_129S1SvImJ_G0018244.1 mouse_genomes_project 11 49393989 49403714 + MGP_129S1SvImJ_P0028849 Mgat4b protein_coding protein_coding MGP_129S1SvImJ_T0028850.1 MGP_129S1SvImJ_G0018244.1 mouse_genomes_project 11 49399394 49403714 + MGP_129S1SvImJ_P0028850 Mgat4b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028851.1 MGP_129S1SvImJ_G0018244.1 mouse_genomes_project 11 49399402 49400378 + Mgat4b protein_coding retained_intron MGP_129S1SvImJ_T0028852.1 MGP_129S1SvImJ_G0018244.1 mouse_genomes_project 11 49402633 49403528 + Mgat4b protein_coding retained_intron MGP_129S1SvImJ_T0031313.1 MGP_129S1SvImJ_G0018862.1 mouse_genomes_project 11 85238192 85297145 + MGP_129S1SvImJ_P0031313 Hnf1b protein_coding protein_coding MGP_129S1SvImJ_T0031314.1 MGP_129S1SvImJ_G0018862.1 mouse_genomes_project 11 85238367 85297151 + MGP_129S1SvImJ_P0031314 Hnf1b protein_coding protein_coding MGP_129S1SvImJ_T0031315.1 MGP_129S1SvImJ_G0018862.1 mouse_genomes_project 11 85239560 85251565 + MGP_129S1SvImJ_P0031315 Hnf1b protein_coding protein_coding MGP_129S1SvImJ_T0003258.1 MGP_129S1SvImJ_G0003019.1 mouse_genomes_project 11 82034796 82042705 - 4930507D10Rik antisense antisense MGP_129S1SvImJ_T0003380.1 MGP_129S1SvImJ_G0003115.1 mouse_genomes_project 11 124684287 124685176 - Gm11772 antisense antisense MGP_129S1SvImJ_T0006401.1 MGP_129S1SvImJ_G0005336.1 mouse_genomes_project 11 126358154 126365364 + Gm12589 lincRNA lincRNA MGP_129S1SvImJ_T0102140.1 MGP_129S1SvImJ_G0039975.1 mouse_genomes_project 11 74334609 74339034 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0030470.1 MGP_129S1SvImJ_G0018633.1 mouse_genomes_project 11 72829618 72833483 - MGP_129S1SvImJ_P0030470 Med31 protein_coding protein_coding MGP_129S1SvImJ_T0030471.1 MGP_129S1SvImJ_G0018633.1 mouse_genomes_project 11 72831126 72832956 - Med31 protein_coding retained_intron MGP_129S1SvImJ_T0031201.1 MGP_129S1SvImJ_G0018825.1 mouse_genomes_project 11 83363486 83365101 + MGP_129S1SvImJ_P0031201 Ccl8 protein_coding protein_coding MGP_129S1SvImJ_T0033222.1 MGP_129S1SvImJ_G0019334.1 mouse_genomes_project 11 113014522 113039702 - MGP_129S1SvImJ_P0033222 Slc16a6 protein_coding protein_coding MGP_129S1SvImJ_T0033223.1 MGP_129S1SvImJ_G0019334.1 mouse_genomes_project 11 113016388 113039398 - MGP_129S1SvImJ_P0033223 Slc16a6 protein_coding protein_coding MGP_129S1SvImJ_T0033224.1 MGP_129S1SvImJ_G0019334.1 mouse_genomes_project 11 113025521 113038792 - MGP_129S1SvImJ_P0033224 Slc16a6 protein_coding protein_coding MGP_129S1SvImJ_T0033225.1 MGP_129S1SvImJ_G0019334.1 mouse_genomes_project 11 113032729 113039303 - Slc16a6 protein_coding processed_transcript MGP_129S1SvImJ_T0006299.1 MGP_129S1SvImJ_G0005263.1 mouse_genomes_project 11 79456579 79457374 + Gm11195 lincRNA lincRNA MGP_129S1SvImJ_T0100473.1 MGP_129S1SvImJ_G0038540.1 mouse_genomes_project 11 2624322 2624452 - Gm22471 snoRNA snoRNA MGP_129S1SvImJ_T0012773.1 MGP_129S1SvImJ_G0010862.1 mouse_genomes_project 11 110549943 110550276 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031619.1 MGP_129S1SvImJ_G0018934.1 mouse_genomes_project 11 91185541 91214469 - MGP_129S1SvImJ_P0031619 protein_coding protein_coding MGP_129S1SvImJ_T0028813.1 MGP_129S1SvImJ_G0018238.1 mouse_genomes_project 11 48995839 49035506 + MGP_129S1SvImJ_P0028813 Mapk9 protein_coding protein_coding MGP_129S1SvImJ_T0028814.1 MGP_129S1SvImJ_G0018238.1 mouse_genomes_project 11 48995839 49035506 + MGP_129S1SvImJ_P0028814 Mapk9 protein_coding protein_coding MGP_129S1SvImJ_T0028815.1 MGP_129S1SvImJ_G0018238.1 mouse_genomes_project 11 48995839 49035506 + MGP_129S1SvImJ_P0028815 Mapk9 protein_coding protein_coding MGP_129S1SvImJ_T0028816.1 MGP_129S1SvImJ_G0018238.1 mouse_genomes_project 11 48995841 49035506 + MGP_129S1SvImJ_P0028816 Mapk9 protein_coding protein_coding MGP_129S1SvImJ_T0028817.1 MGP_129S1SvImJ_G0018238.1 mouse_genomes_project 11 48995859 49024711 + Mapk9 protein_coding processed_transcript MGP_129S1SvImJ_T0028818.1 MGP_129S1SvImJ_G0018238.1 mouse_genomes_project 11 48995981 49022482 + Mapk9 protein_coding processed_transcript MGP_129S1SvImJ_T0028819.1 MGP_129S1SvImJ_G0018238.1 mouse_genomes_project 11 49003304 49035496 + MGP_129S1SvImJ_P0028819 Mapk9 protein_coding protein_coding MGP_129S1SvImJ_T0028820.1 MGP_129S1SvImJ_G0018238.1 mouse_genomes_project 11 49003321 49023410 + Mapk9 protein_coding processed_transcript MGP_129S1SvImJ_T0028821.1 MGP_129S1SvImJ_G0018238.1 mouse_genomes_project 11 49003348 49032395 + MGP_129S1SvImJ_P0028821 Mapk9 protein_coding protein_coding MGP_129S1SvImJ_T0028822.1 MGP_129S1SvImJ_G0018238.1 mouse_genomes_project 11 49003348 49032395 + MGP_129S1SvImJ_P0028822 Mapk9 protein_coding protein_coding MGP_129S1SvImJ_T0030898.1 MGP_129S1SvImJ_G0018753.1 mouse_genomes_project 11 78623816 78653882 + MGP_129S1SvImJ_P0030898 Nufip2 protein_coding protein_coding MGP_129S1SvImJ_T0030899.1 MGP_129S1SvImJ_G0018753.1 mouse_genomes_project 11 78623833 78689641 + MGP_129S1SvImJ_P0030899 Nufip2 protein_coding protein_coding MGP_129S1SvImJ_T0030900.1 MGP_129S1SvImJ_G0018753.1 mouse_genomes_project 11 78625120 78629583 + Nufip2 protein_coding processed_transcript MGP_129S1SvImJ_T0030901.1 MGP_129S1SvImJ_G0018753.1 mouse_genomes_project 11 78625267 78629381 + Nufip2 protein_coding processed_transcript MGP_129S1SvImJ_T0031242.1 MGP_129S1SvImJ_G0018835.1 mouse_genomes_project 11 84199678 84232527 + MGP_129S1SvImJ_P0031242 Unc45b protein_coding protein_coding MGP_129S1SvImJ_T0031243.1 MGP_129S1SvImJ_G0018835.1 mouse_genomes_project 11 84200381 84232527 + MGP_129S1SvImJ_P0031243 Unc45b protein_coding protein_coding MGP_129S1SvImJ_T0031244.1 MGP_129S1SvImJ_G0018835.1 mouse_genomes_project 11 84200381 84232527 + MGP_129S1SvImJ_P0031244 Unc45b protein_coding protein_coding MGP_129S1SvImJ_T0031245.1 MGP_129S1SvImJ_G0018835.1 mouse_genomes_project 11 84219038 84219825 + Unc45b protein_coding processed_transcript MGP_129S1SvImJ_T0031246.1 MGP_129S1SvImJ_G0018835.1 mouse_genomes_project 11 84222664 84226772 + Unc45b protein_coding processed_transcript MGP_129S1SvImJ_T0033129.1 MGP_129S1SvImJ_G0019315.1 mouse_genomes_project 11 110157723 110269796 - MGP_129S1SvImJ_P0033129 Smurf2 protein_coding protein_coding MGP_129S1SvImJ_T0033130.1 MGP_129S1SvImJ_G0019315.1 mouse_genomes_project 11 110159682 110269356 - Smurf2 protein_coding processed_transcript MGP_129S1SvImJ_T0033131.1 MGP_129S1SvImJ_G0019315.1 mouse_genomes_project 11 110159682 110269551 - MGP_129S1SvImJ_P0033131 Smurf2 protein_coding protein_coding MGP_129S1SvImJ_T0033132.1 MGP_129S1SvImJ_G0019315.1 mouse_genomes_project 11 110160270 110269440 - MGP_129S1SvImJ_P0033132 Smurf2 protein_coding protein_coding MGP_129S1SvImJ_T0033133.1 MGP_129S1SvImJ_G0019315.1 mouse_genomes_project 11 110163031 110167320 - Smurf2 protein_coding processed_transcript MGP_129S1SvImJ_T0033134.1 MGP_129S1SvImJ_G0019315.1 mouse_genomes_project 11 110168901 110177614 - Smurf2 protein_coding processed_transcript MGP_129S1SvImJ_T0031349.1 MGP_129S1SvImJ_G0018870.1 mouse_genomes_project 11 85939900 85947133 - MGP_129S1SvImJ_P0031349 Lhx1 protein_coding protein_coding MGP_129S1SvImJ_T0031350.1 MGP_129S1SvImJ_G0018870.1 mouse_genomes_project 11 85941050 85943929 - MGP_129S1SvImJ_P0031350 Lhx1 protein_coding protein_coding MGP_129S1SvImJ_T0031351.1 MGP_129S1SvImJ_G0018870.1 mouse_genomes_project 11 85941315 85943665 - Lhx1 protein_coding retained_intron MGP_129S1SvImJ_T0031352.1 MGP_129S1SvImJ_G0018870.1 mouse_genomes_project 11 85943493 85944310 - MGP_129S1SvImJ_P0031352 Lhx1 protein_coding protein_coding MGP_129S1SvImJ_T0031939.1 MGP_129S1SvImJ_G0019014.1 mouse_genomes_project 11 99204368 99206093 + Copz2 protein_coding retained_intron MGP_129S1SvImJ_T0031940.1 MGP_129S1SvImJ_G0019014.1 mouse_genomes_project 11 99204374 99215769 + MGP_129S1SvImJ_P0031940 Copz2 protein_coding protein_coding MGP_129S1SvImJ_T0031941.1 MGP_129S1SvImJ_G0019014.1 mouse_genomes_project 11 99204379 99208656 + MGP_129S1SvImJ_P0031941 Copz2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031942.1 MGP_129S1SvImJ_G0019014.1 mouse_genomes_project 11 99208402 99211444 + Copz2 protein_coding retained_intron MGP_129S1SvImJ_T0031943.1 MGP_129S1SvImJ_G0019014.1 mouse_genomes_project 11 99208633 99215769 + MGP_129S1SvImJ_P0031943 Copz2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0012724.1 MGP_129S1SvImJ_G0010813.1 mouse_genomes_project 11 90155824 90156354 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003371.1 MGP_129S1SvImJ_G0003106.1 mouse_genomes_project 11 121478200 121483991 - Gm16045 antisense antisense MGP_129S1SvImJ_T0031484.1 MGP_129S1SvImJ_G0018900.1 mouse_genomes_project 11 88686210 88702258 + MGP_129S1SvImJ_P0031484 Ska2 protein_coding protein_coding MGP_129S1SvImJ_T0031485.1 MGP_129S1SvImJ_G0018900.1 mouse_genomes_project 11 88686227 88702257 + Ska2 protein_coding processed_transcript MGP_129S1SvImJ_T0031486.1 MGP_129S1SvImJ_G0018900.1 mouse_genomes_project 11 88692845 88699730 + Ska2 protein_coding processed_transcript MGP_129S1SvImJ_T0032306.1 MGP_129S1SvImJ_G0019136.1 mouse_genomes_project 11 102782862 102787102 - MGP_129S1SvImJ_P0032306 Krt34 protein_coding protein_coding MGP_129S1SvImJ_T0030787.1 MGP_129S1SvImJ_G0018728.1 mouse_genomes_project 11 76920183 77068396 - Glod4 protein_coding retained_intron MGP_129S1SvImJ_T0030800.1 MGP_129S1SvImJ_G0018728.1 mouse_genomes_project 11 77033795 77068384 - MGP_129S1SvImJ_P0030800 Glod4 protein_coding protein_coding MGP_129S1SvImJ_T0030803.1 MGP_129S1SvImJ_G0018728.1 mouse_genomes_project 11 77044053 77068446 - MGP_129S1SvImJ_P0030803 Glod4 protein_coding protein_coding MGP_129S1SvImJ_T0030804.1 MGP_129S1SvImJ_G0018728.1 mouse_genomes_project 11 77044150 77068372 - MGP_129S1SvImJ_P0030804 Glod4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030805.1 MGP_129S1SvImJ_G0018728.1 mouse_genomes_project 11 77044337 77068180 - MGP_129S1SvImJ_P0030805 Glod4 protein_coding protein_coding MGP_129S1SvImJ_T0030806.1 MGP_129S1SvImJ_G0018728.1 mouse_genomes_project 11 77056231 77068331 - MGP_129S1SvImJ_P0030806 Glod4 protein_coding protein_coding MGP_129S1SvImJ_T0030807.1 MGP_129S1SvImJ_G0018728.1 mouse_genomes_project 11 77057248 77064304 - Glod4 protein_coding retained_intron MGP_129S1SvImJ_T0030808.1 MGP_129S1SvImJ_G0018728.1 mouse_genomes_project 11 77057520 77068390 - MGP_129S1SvImJ_P0030808 Glod4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030809.1 MGP_129S1SvImJ_G0018728.1 mouse_genomes_project 11 77060705 77068359 - MGP_129S1SvImJ_P0030809 Glod4 protein_coding protein_coding MGP_129S1SvImJ_T0006220.1 MGP_129S1SvImJ_G0005195.1 mouse_genomes_project 11 26664040 26675739 + 2810471M01Rik lincRNA lincRNA MGP_129S1SvImJ_T0032288.1 MGP_129S1SvImJ_G0019118.1 mouse_genomes_project 11 102501283 102502188 - MGP_129S1SvImJ_P0032288 Krtap4-13 protein_coding protein_coding MGP_129S1SvImJ_T0032091.1 MGP_129S1SvImJ_G0019048.1 mouse_genomes_project 11 100520460 100521654 + Rpl19 protein_coding retained_intron MGP_129S1SvImJ_T0032092.1 MGP_129S1SvImJ_G0019048.1 mouse_genomes_project 11 100520489 100523992 + MGP_129S1SvImJ_P0032092 Rpl19 protein_coding protein_coding MGP_129S1SvImJ_T0009722.1 MGP_129S1SvImJ_G0007838.1 mouse_genomes_project 11 75585216 75585284 - Mir6926 miRNA miRNA MGP_129S1SvImJ_T0031794.1 MGP_129S1SvImJ_G0018974.1 mouse_genomes_project 11 97194038 97211956 + MGP_129S1SvImJ_P0031794 Samd14 protein_coding protein_coding MGP_129S1SvImJ_T0031795.1 MGP_129S1SvImJ_G0018974.1 mouse_genomes_project 11 97194041 97207509 + Samd14 protein_coding processed_transcript MGP_129S1SvImJ_T0031796.1 MGP_129S1SvImJ_G0018974.1 mouse_genomes_project 11 97194383 97205985 + MGP_129S1SvImJ_P0031796 Samd14 protein_coding protein_coding MGP_129S1SvImJ_T0017247.1 MGP_129S1SvImJ_G0015186.1 mouse_genomes_project 11 76351009 76356112 - 4931413K12Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0012564.1 MGP_129S1SvImJ_G0010653.1 mouse_genomes_project 11 28663515 28665115 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012474.1 MGP_129S1SvImJ_G0010563.1 mouse_genomes_project 11 1033121 1033591 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012774.1 MGP_129S1SvImJ_G0010863.1 mouse_genomes_project 11 110568945 110569482 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032297.1 MGP_129S1SvImJ_G0019127.1 mouse_genomes_project 11 102593347 102595752 + MGP_129S1SvImJ_P0032297 Gm11567 protein_coding protein_coding MGP_129S1SvImJ_T0098809.1 MGP_129S1SvImJ_G0036893.1 mouse_genomes_project 11 68609498 68610820 - Gm12305 sense_intronic sense_intronic MGP_129S1SvImJ_T0028395.1 MGP_129S1SvImJ_G0018113.1 mouse_genomes_project 11 28133482 28308526 - MGP_129S1SvImJ_P0028395 Sptbn1 protein_coding protein_coding MGP_129S1SvImJ_T0028396.1 MGP_129S1SvImJ_G0018113.1 mouse_genomes_project 11 28133483 28137337 - Sptbn1 protein_coding retained_intron MGP_129S1SvImJ_T0028397.1 MGP_129S1SvImJ_G0018113.1 mouse_genomes_project 11 28133483 28259253 - MGP_129S1SvImJ_P0028397 Sptbn1 protein_coding protein_coding MGP_129S1SvImJ_T0028398.1 MGP_129S1SvImJ_G0018113.1 mouse_genomes_project 11 28135600 28139698 - Sptbn1 protein_coding retained_intron MGP_129S1SvImJ_T0028399.1 MGP_129S1SvImJ_G0018113.1 mouse_genomes_project 11 28140872 28237742 - MGP_129S1SvImJ_P0028399 Sptbn1 protein_coding protein_coding MGP_129S1SvImJ_T0028400.1 MGP_129S1SvImJ_G0018113.1 mouse_genomes_project 11 28143958 28145447 - Sptbn1 protein_coding retained_intron MGP_129S1SvImJ_T0028401.1 MGP_129S1SvImJ_G0018113.1 mouse_genomes_project 11 28144035 28307571 - MGP_129S1SvImJ_P0028401 Sptbn1 protein_coding protein_coding MGP_129S1SvImJ_T0028402.1 MGP_129S1SvImJ_G0018113.1 mouse_genomes_project 11 28256139 28308532 - Sptbn1 protein_coding retained_intron MGP_129S1SvImJ_T0100488.1 MGP_129S1SvImJ_G0038555.1 mouse_genomes_project 11 23515175 23515305 + Gm23514 snoRNA snoRNA MGP_129S1SvImJ_T0028631.1 MGP_129S1SvImJ_G0018176.1 mouse_genomes_project 11 42372571 42381698 - MGP_129S1SvImJ_P0028631 Fabp6 protein_coding protein_coding MGP_129S1SvImJ_T0009699.1 MGP_129S1SvImJ_G0007815.1 mouse_genomes_project 11 60174625 60174743 - Gm27711 miRNA miRNA MGP_129S1SvImJ_T0098727.1 MGP_129S1SvImJ_G0036812.1 mouse_genomes_project 11 9227560 9227688 - Gm25058 scaRNA scaRNA MGP_129S1SvImJ_T0032273.1 MGP_129S1SvImJ_G0019103.1 mouse_genomes_project 11 102275840 102276608 - MGP_129S1SvImJ_P0032273 Krtap9-3 protein_coding protein_coding MGP_129S1SvImJ_T0031555.1 MGP_129S1SvImJ_G0018914.1 mouse_genomes_project 11 89492411 89503030 + MGP_129S1SvImJ_P0031555 Mks1 protein_coding protein_coding MGP_129S1SvImJ_T0031556.1 MGP_129S1SvImJ_G0018914.1 mouse_genomes_project 11 89492423 89498535 + Mks1 protein_coding retained_intron MGP_129S1SvImJ_T0031557.1 MGP_129S1SvImJ_G0018914.1 mouse_genomes_project 11 89492871 89498535 + Mks1 protein_coding retained_intron MGP_129S1SvImJ_T0031558.1 MGP_129S1SvImJ_G0018914.1 mouse_genomes_project 11 89495773 89496508 + Mks1 protein_coding retained_intron MGP_129S1SvImJ_T0031559.1 MGP_129S1SvImJ_G0018914.1 mouse_genomes_project 11 89501160 89502488 + Mks1 protein_coding retained_intron MGP_129S1SvImJ_T0033843.1 MGP_129S1SvImJ_G0019457.1 mouse_genomes_project 11 122145665 122152453 + MGP_129S1SvImJ_P0033843 Tmem235 protein_coding protein_coding MGP_129S1SvImJ_T0031609.1 MGP_129S1SvImJ_G0018929.1 mouse_genomes_project 11 90764971 90785731 + MGP_129S1SvImJ_P0031609 Trim25 protein_coding protein_coding MGP_129S1SvImJ_T0031610.1 MGP_129S1SvImJ_G0018929.1 mouse_genomes_project 11 90764971 90785731 + MGP_129S1SvImJ_P0031610 Trim25 protein_coding protein_coding MGP_129S1SvImJ_T0031611.1 MGP_129S1SvImJ_G0018929.1 mouse_genomes_project 11 90764971 90779167 + MGP_129S1SvImJ_P0031611 Trim25 protein_coding protein_coding MGP_129S1SvImJ_T0030832.1 MGP_129S1SvImJ_G0018736.1 mouse_genomes_project 11 77515427 77516634 + MGP_129S1SvImJ_P0030832 Bhlha9 protein_coding protein_coding MGP_129S1SvImJ_T0017236.1 MGP_129S1SvImJ_G0015180.1 mouse_genomes_project 11 68239502 68268596 + 9130017K11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017237.1 MGP_129S1SvImJ_G0015180.1 mouse_genomes_project 11 68240374 68241791 + 9130017K11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0003228.1 MGP_129S1SvImJ_G0002994.1 mouse_genomes_project 11 67177173 67224818 - Gm12298 antisense antisense MGP_129S1SvImJ_T0028037.1 MGP_129S1SvImJ_G0018034.1 mouse_genomes_project 11 4406482 4414285 - MGP_129S1SvImJ_P0028037 Igfbp3 protein_coding protein_coding MGP_129S1SvImJ_T0028038.1 MGP_129S1SvImJ_G0018034.1 mouse_genomes_project 11 4408081 4414311 - MGP_129S1SvImJ_P0028038 Igfbp3 protein_coding protein_coding MGP_129S1SvImJ_T0033107.1 MGP_129S1SvImJ_G0019312.1 mouse_genomes_project 11 110102436 110114427 - MGP_129S1SvImJ_P0033107 Polg2 protein_coding protein_coding MGP_129S1SvImJ_T0033108.1 MGP_129S1SvImJ_G0019312.1 mouse_genomes_project 11 110102436 110114449 - MGP_129S1SvImJ_P0033108 Polg2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033109.1 MGP_129S1SvImJ_G0019312.1 mouse_genomes_project 11 110102916 110114385 - MGP_129S1SvImJ_P0033109 Polg2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033110.1 MGP_129S1SvImJ_G0019312.1 mouse_genomes_project 11 110105227 110114385 - MGP_129S1SvImJ_P0033110 Polg2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033111.1 MGP_129S1SvImJ_G0019312.1 mouse_genomes_project 11 110106825 110108034 - Polg2 protein_coding retained_intron MGP_129S1SvImJ_T0033112.1 MGP_129S1SvImJ_G0019312.1 mouse_genomes_project 11 110109698 110114414 - MGP_129S1SvImJ_P0033112 Polg2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0009719.1 MGP_129S1SvImJ_G0007835.1 mouse_genomes_project 11 73004426 73004535 + Mir6338 miRNA miRNA MGP_129S1SvImJ_T0029726.1 MGP_129S1SvImJ_G0018475.1 mouse_genomes_project 11 65348378 65356603 - MGP_129S1SvImJ_P0029726 1700086D15Rik protein_coding protein_coding MGP_129S1SvImJ_T0029727.1 MGP_129S1SvImJ_G0018475.1 mouse_genomes_project 11 65348378 65356602 - MGP_129S1SvImJ_P0029727 1700086D15Rik protein_coding protein_coding MGP_129S1SvImJ_T0012493.1 MGP_129S1SvImJ_G0010582.1 mouse_genomes_project 11 6395022 6395823 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012529.1 MGP_129S1SvImJ_G0010618.1 mouse_genomes_project 11 18683443 18683737 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009735.1 MGP_129S1SvImJ_G0007851.1 mouse_genomes_project 11 80846417 80846529 + Mir365-2 miRNA miRNA MGP_129S1SvImJ_T0033031.1 MGP_129S1SvImJ_G0019293.1 mouse_genomes_project 11 109362560 109434471 + MGP_129S1SvImJ_P0033031 Map3k3 protein_coding protein_coding MGP_129S1SvImJ_T0033032.1 MGP_129S1SvImJ_G0019293.1 mouse_genomes_project 11 109430235 109431402 + Map3k3 protein_coding processed_transcript MGP_129S1SvImJ_T0033033.1 MGP_129S1SvImJ_G0019293.1 mouse_genomes_project 11 109431087 109433164 + Map3k3 protein_coding processed_transcript MGP_129S1SvImJ_T0030727.1 MGP_129S1SvImJ_G0018717.1 mouse_genomes_project 11 76289799 76302253 + MGP_129S1SvImJ_P0030727 Slc43a2 protein_coding protein_coding MGP_129S1SvImJ_T0030728.1 MGP_129S1SvImJ_G0018717.1 mouse_genomes_project 11 76289803 76337822 + MGP_129S1SvImJ_P0030728 Slc43a2 protein_coding protein_coding MGP_129S1SvImJ_T0030729.1 MGP_129S1SvImJ_G0018717.1 mouse_genomes_project 11 76289803 76334179 + MGP_129S1SvImJ_P0030729 Slc43a2 protein_coding protein_coding MGP_129S1SvImJ_T0030730.1 MGP_129S1SvImJ_G0018717.1 mouse_genomes_project 11 76289848 76304707 + MGP_129S1SvImJ_P0030730 Slc43a2 protein_coding protein_coding MGP_129S1SvImJ_T0030731.1 MGP_129S1SvImJ_G0018717.1 mouse_genomes_project 11 76290217 76337817 + MGP_129S1SvImJ_P0030731 Slc43a2 protein_coding protein_coding MGP_129S1SvImJ_T0030732.1 MGP_129S1SvImJ_G0018717.1 mouse_genomes_project 11 76290243 76304760 + MGP_129S1SvImJ_P0030732 Slc43a2 protein_coding protein_coding MGP_129S1SvImJ_T0030733.1 MGP_129S1SvImJ_G0018717.1 mouse_genomes_project 11 76296115 76304694 + Slc43a2 protein_coding processed_transcript MGP_129S1SvImJ_T0030734.1 MGP_129S1SvImJ_G0018717.1 mouse_genomes_project 11 76321098 76327351 + Slc43a2 protein_coding retained_intron MGP_129S1SvImJ_T0030735.1 MGP_129S1SvImJ_G0018717.1 mouse_genomes_project 11 76326290 76330475 + Slc43a2 protein_coding processed_transcript MGP_129S1SvImJ_T0030736.1 MGP_129S1SvImJ_G0018717.1 mouse_genomes_project 11 76326986 76332708 + Slc43a2 protein_coding retained_intron MGP_129S1SvImJ_T0030737.1 MGP_129S1SvImJ_G0018717.1 mouse_genomes_project 11 76327099 76332086 + Slc43a2 protein_coding processed_transcript MGP_129S1SvImJ_T0034094.1 MGP_129S1SvImJ_G0019507.1 mouse_genomes_project 11 124999846 125008132 + MGP_129S1SvImJ_P0034094 Gcgr protein_coding protein_coding MGP_129S1SvImJ_T0034095.1 MGP_129S1SvImJ_G0019507.1 mouse_genomes_project 11 124999891 125008134 + Gcgr protein_coding processed_transcript MGP_129S1SvImJ_T0034096.1 MGP_129S1SvImJ_G0019507.1 mouse_genomes_project 11 124999921 125008131 + Gcgr protein_coding processed_transcript MGP_129S1SvImJ_T0034097.1 MGP_129S1SvImJ_G0019507.1 mouse_genomes_project 11 125003827 125005857 + Gcgr protein_coding processed_transcript MGP_129S1SvImJ_T0009772.1 MGP_129S1SvImJ_G0007888.1 mouse_genomes_project 11 110269738 110271656 - miRNA miRNA MGP_129S1SvImJ_T0033854.1 MGP_129S1SvImJ_G0019461.1 mouse_genomes_project 11 122328074 122441239 - MGP_129S1SvImJ_P0033854 Dnah17 protein_coding protein_coding MGP_129S1SvImJ_T0033855.1 MGP_129S1SvImJ_G0019461.1 mouse_genomes_project 11 122328074 122441239 - MGP_129S1SvImJ_P0033855 Dnah17 protein_coding protein_coding MGP_129S1SvImJ_T0033856.1 MGP_129S1SvImJ_G0019461.1 mouse_genomes_project 11 122329431 122415319 - MGP_129S1SvImJ_P0033856 Dnah17 protein_coding protein_coding MGP_129S1SvImJ_T0033857.1 MGP_129S1SvImJ_G0019461.1 mouse_genomes_project 11 122396939 122403272 - MGP_129S1SvImJ_P0033857 Dnah17 protein_coding protein_coding MGP_129S1SvImJ_T0033858.1 MGP_129S1SvImJ_G0019461.1 mouse_genomes_project 11 122424266 122437708 - MGP_129S1SvImJ_P0033858 Dnah17 protein_coding protein_coding MGP_129S1SvImJ_T0012512.1 MGP_129S1SvImJ_G0010601.1 mouse_genomes_project 11 14704561 14705404 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011323.1 MGP_129S1SvImJ_G0009439.1 mouse_genomes_project 11 67670019 67670332 + Gm26476 misc_RNA misc_RNA MGP_129S1SvImJ_T0003353.1 MGP_129S1SvImJ_G0003093.1 mouse_genomes_project 11 112995264 112999510 - antisense antisense MGP_129S1SvImJ_T0031303.1 MGP_129S1SvImJ_G0018858.1 mouse_genomes_project 11 85084810 85087087 + MGP_129S1SvImJ_P0031303 Wfdc17 protein_coding protein_coding MGP_129S1SvImJ_T0033357.1 MGP_129S1SvImJ_G0019363.1 mouse_genomes_project 11 118846759 118861916 + MGP_129S1SvImJ_P0033357 Cd300a protein_coding protein_coding MGP_129S1SvImJ_T0033358.1 MGP_129S1SvImJ_G0019363.1 mouse_genomes_project 11 118846759 118861916 + MGP_129S1SvImJ_P0033358 Cd300a protein_coding protein_coding MGP_129S1SvImJ_T0033359.1 MGP_129S1SvImJ_G0019363.1 mouse_genomes_project 11 118847012 118851033 + Cd300a protein_coding processed_transcript MGP_129S1SvImJ_T0031187.1 MGP_129S1SvImJ_G0018816.1 mouse_genomes_project 11 81995104 82006899 + MGP_129S1SvImJ_P0031187 Tmem98 protein_coding protein_coding MGP_129S1SvImJ_T0030339.1 MGP_129S1SvImJ_G0018609.1 mouse_genomes_project 11 71195319 71198104 - MGP_129S1SvImJ_P0030339 Pfn1 protein_coding protein_coding MGP_129S1SvImJ_T0030340.1 MGP_129S1SvImJ_G0018609.1 mouse_genomes_project 11 71195398 71198081 - MGP_129S1SvImJ_P0030340 Pfn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030341.1 MGP_129S1SvImJ_G0018609.1 mouse_genomes_project 11 71196071 71198068 - Pfn1 protein_coding retained_intron MGP_129S1SvImJ_T0030342.1 MGP_129S1SvImJ_G0018609.1 mouse_genomes_project 11 71196081 71198058 - MGP_129S1SvImJ_P0030342 Pfn1 protein_coding protein_coding MGP_129S1SvImJ_T0017268.1 MGP_129S1SvImJ_G0015196.1 mouse_genomes_project 11 98101086 98103265 + 4833417C18Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0029309.1 MGP_129S1SvImJ_G0018382.1 mouse_genomes_project 11 58711355 58720624 - MGP_129S1SvImJ_P0029309 protein_coding protein_coding MGP_129S1SvImJ_T0098448.1 MGP_129S1SvImJ_G0036533.1 mouse_genomes_project 11 50001742 50001855 + Gm23392 rRNA rRNA MGP_129S1SvImJ_T0029484.1 MGP_129S1SvImJ_G0018426.1 mouse_genomes_project 11 60707037 60730400 - MGP_129S1SvImJ_P0029484 Shmt1 protein_coding protein_coding MGP_129S1SvImJ_T0029485.1 MGP_129S1SvImJ_G0018426.1 mouse_genomes_project 11 60708008 60718532 - Shmt1 protein_coding processed_transcript MGP_129S1SvImJ_T0029486.1 MGP_129S1SvImJ_G0018426.1 mouse_genomes_project 11 60708248 60726147 - MGP_129S1SvImJ_P0029486 Shmt1 protein_coding protein_coding MGP_129S1SvImJ_T0029487.1 MGP_129S1SvImJ_G0018426.1 mouse_genomes_project 11 60708248 60726147 - MGP_129S1SvImJ_P0029487 Shmt1 protein_coding protein_coding MGP_129S1SvImJ_T0029488.1 MGP_129S1SvImJ_G0018426.1 mouse_genomes_project 11 60708248 60726147 - MGP_129S1SvImJ_P0029488 Shmt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029489.1 MGP_129S1SvImJ_G0018426.1 mouse_genomes_project 11 60708352 60714146 - Shmt1 protein_coding retained_intron MGP_129S1SvImJ_T0029490.1 MGP_129S1SvImJ_G0018426.1 mouse_genomes_project 11 60708700 60712313 - Shmt1 protein_coding retained_intron MGP_129S1SvImJ_T0029491.1 MGP_129S1SvImJ_G0018426.1 mouse_genomes_project 11 60712088 60716982 - Shmt1 protein_coding retained_intron MGP_129S1SvImJ_T0029492.1 MGP_129S1SvImJ_G0018426.1 mouse_genomes_project 11 60716373 60730226 - Shmt1 protein_coding retained_intron MGP_129S1SvImJ_T0029493.1 MGP_129S1SvImJ_G0018426.1 mouse_genomes_project 11 60717780 60721797 - Shmt1 protein_coding processed_transcript MGP_129S1SvImJ_T0029494.1 MGP_129S1SvImJ_G0018426.1 mouse_genomes_project 11 60723472 60731995 - Shmt1 protein_coding processed_transcript MGP_129S1SvImJ_T0032653.1 MGP_129S1SvImJ_G0019218.1 mouse_genomes_project 11 104984266 104999205 + MGP_129S1SvImJ_P0032653 Cd300lg protein_coding protein_coding MGP_129S1SvImJ_T0032654.1 MGP_129S1SvImJ_G0019218.1 mouse_genomes_project 11 104984266 104999205 + MGP_129S1SvImJ_P0032654 Cd300lg protein_coding protein_coding MGP_129S1SvImJ_T0032655.1 MGP_129S1SvImJ_G0019218.1 mouse_genomes_project 11 104984266 104994051 + MGP_129S1SvImJ_P0032655 Cd300lg protein_coding protein_coding MGP_129S1SvImJ_T0032656.1 MGP_129S1SvImJ_G0019218.1 mouse_genomes_project 11 104984266 104999205 + MGP_129S1SvImJ_P0032656 Cd300lg protein_coding protein_coding MGP_129S1SvImJ_T0031644.1 MGP_129S1SvImJ_G0018941.1 mouse_genomes_project 11 92488030 92531244 - MGP_129S1SvImJ_P0031644 Tom1l1 protein_coding protein_coding MGP_129S1SvImJ_T0031645.1 MGP_129S1SvImJ_G0018941.1 mouse_genomes_project 11 92490245 92507511 - MGP_129S1SvImJ_P0031645 Tom1l1 protein_coding protein_coding MGP_129S1SvImJ_T0031646.1 MGP_129S1SvImJ_G0018941.1 mouse_genomes_project 11 92490246 92531238 - MGP_129S1SvImJ_P0031646 Tom1l1 protein_coding protein_coding MGP_129S1SvImJ_T0031647.1 MGP_129S1SvImJ_G0018941.1 mouse_genomes_project 11 92490246 92531216 - MGP_129S1SvImJ_P0031647 Tom1l1 protein_coding protein_coding MGP_129S1SvImJ_T0031648.1 MGP_129S1SvImJ_G0018941.1 mouse_genomes_project 11 92490784 92494457 - Tom1l1 protein_coding retained_intron MGP_129S1SvImJ_T0031649.1 MGP_129S1SvImJ_G0018941.1 mouse_genomes_project 11 92501560 92507824 - Tom1l1 protein_coding retained_intron MGP_129S1SvImJ_T0031650.1 MGP_129S1SvImJ_G0018941.1 mouse_genomes_project 11 92515139 92531225 - MGP_129S1SvImJ_P0031650 Tom1l1 protein_coding protein_coding MGP_129S1SvImJ_T0031651.1 MGP_129S1SvImJ_G0018941.1 mouse_genomes_project 11 92526917 92532002 - Tom1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0032193.1 MGP_129S1SvImJ_G0019072.1 mouse_genomes_project 11 101369435 101376845 - MGP_129S1SvImJ_P0032193 Nr1d1 protein_coding protein_coding MGP_129S1SvImJ_T0032194.1 MGP_129S1SvImJ_G0019072.1 mouse_genomes_project 11 101370860 101371940 - Nr1d1 protein_coding processed_transcript MGP_129S1SvImJ_T0031839.1 MGP_129S1SvImJ_G0018984.1 mouse_genomes_project 11 97711115 97715834 - MGP_129S1SvImJ_P0031839 Nxph3 protein_coding protein_coding MGP_129S1SvImJ_T0030619.1 MGP_129S1SvImJ_G0018689.1 mouse_genomes_project 11 74908849 74985260 + MGP_129S1SvImJ_P0030619 Olfr59 protein_coding protein_coding MGP_129S1SvImJ_T0030620.1 MGP_129S1SvImJ_G0018689.1 mouse_genomes_project 11 74979714 74985096 + MGP_129S1SvImJ_P0030620 Olfr59 protein_coding protein_coding MGP_129S1SvImJ_T0030621.1 MGP_129S1SvImJ_G0018689.1 mouse_genomes_project 11 74979729 74985546 + MGP_129S1SvImJ_P0030621 Olfr59 protein_coding protein_coding MGP_129S1SvImJ_T0030622.1 MGP_129S1SvImJ_G0018689.1 mouse_genomes_project 11 74979753 74985095 + MGP_129S1SvImJ_P0030622 Olfr59 protein_coding protein_coding MGP_129S1SvImJ_T0012783.1 MGP_129S1SvImJ_G0010872.1 mouse_genomes_project 11 117508971 117509773 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028555.1 MGP_129S1SvImJ_G0018158.1 mouse_genomes_project 11 34253116 34401097 - MGP_129S1SvImJ_P0028555 Wwc1 protein_coding protein_coding MGP_129S1SvImJ_T0028556.1 MGP_129S1SvImJ_G0018158.1 mouse_genomes_project 11 34267408 34268768 - Wwc1 protein_coding processed_transcript MGP_129S1SvImJ_T0028557.1 MGP_129S1SvImJ_G0018158.1 mouse_genomes_project 11 34285477 34293161 - Wwc1 protein_coding processed_transcript MGP_129S1SvImJ_T0031385.1 MGP_129S1SvImJ_G0018877.1 mouse_genomes_project 11 86424398 86429168 + Car4 protein_coding retained_intron MGP_129S1SvImJ_T0031386.1 MGP_129S1SvImJ_G0018877.1 mouse_genomes_project 11 86424400 86432657 + MGP_129S1SvImJ_P0031386 Car4 protein_coding protein_coding MGP_129S1SvImJ_T0031387.1 MGP_129S1SvImJ_G0018877.1 mouse_genomes_project 11 86424423 86428531 + Car4 protein_coding processed_transcript MGP_129S1SvImJ_T0031388.1 MGP_129S1SvImJ_G0018877.1 mouse_genomes_project 11 86424437 86431176 + MGP_129S1SvImJ_P0031388 Car4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031389.1 MGP_129S1SvImJ_G0018877.1 mouse_genomes_project 11 86424716 86430841 + MGP_129S1SvImJ_P0031389 Car4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031390.1 MGP_129S1SvImJ_G0018877.1 mouse_genomes_project 11 86430710 86432656 + MGP_129S1SvImJ_P0031390 Car4 protein_coding protein_coding MGP_129S1SvImJ_T0102129.1 MGP_129S1SvImJ_G0039964.1 mouse_genomes_project 11 47959630 48124372 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0028751.1 MGP_129S1SvImJ_G0018216.1 mouse_genomes_project 11 48140935 48150678 + Ifi47 protein_coding processed_transcript MGP_129S1SvImJ_T0028753.1 MGP_129S1SvImJ_G0018216.1 mouse_genomes_project 11 48141274 48152214 + MGP_129S1SvImJ_P0028753 Ifi47 protein_coding protein_coding MGP_129S1SvImJ_T0006375.1 MGP_129S1SvImJ_G0005314.1 mouse_genomes_project 11 117944419 117948320 + 1700025D23Rik lincRNA lincRNA MGP_129S1SvImJ_T0028140.1 MGP_129S1SvImJ_G0018058.1 mouse_genomes_project 11 14605011 14613382 - MGP_129S1SvImJ_P0028140 Pno1 protein_coding protein_coding MGP_129S1SvImJ_T0028141.1 MGP_129S1SvImJ_G0018058.1 mouse_genomes_project 11 14610602 14612868 - Pno1 protein_coding processed_transcript MGP_129S1SvImJ_T0034104.1 MGP_129S1SvImJ_G0019511.1 mouse_genomes_project 11 125049409 125052930 - MGP_129S1SvImJ_P0034104 Arhgdia protein_coding protein_coding MGP_129S1SvImJ_T0034105.1 MGP_129S1SvImJ_G0019511.1 mouse_genomes_project 11 125049414 125052686 - MGP_129S1SvImJ_P0034105 Arhgdia protein_coding protein_coding MGP_129S1SvImJ_T0029268.1 MGP_129S1SvImJ_G0018358.1 mouse_genomes_project 11 58230101 58231194 - MGP_129S1SvImJ_P0029268 protein_coding protein_coding MGP_129S1SvImJ_T0031483.1 MGP_129S1SvImJ_G0018899.1 mouse_genomes_project 11 88665309 88685685 - MGP_129S1SvImJ_P0031483 Prr11 protein_coding protein_coding MGP_129S1SvImJ_T0031076.1 MGP_129S1SvImJ_G0018790.1 mouse_genomes_project 11 79873560 79895485 + MGP_129S1SvImJ_P0031076 Lyrm9 protein_coding protein_coding MGP_129S1SvImJ_T0031077.1 MGP_129S1SvImJ_G0018790.1 mouse_genomes_project 11 79873580 79886891 + MGP_129S1SvImJ_P0031077 Lyrm9 protein_coding protein_coding MGP_129S1SvImJ_T0031078.1 MGP_129S1SvImJ_G0018790.1 mouse_genomes_project 11 79873605 79887910 + Lyrm9 protein_coding processed_transcript MGP_129S1SvImJ_T0017206.1 MGP_129S1SvImJ_G0015161.1 mouse_genomes_project 11 21317892 21318682 - Gm12060 processed_transcript processed_transcript MGP_129S1SvImJ_T0006209.1 MGP_129S1SvImJ_G0005188.1 mouse_genomes_project 11 21995686 22011889 + Gm12066 lincRNA lincRNA MGP_129S1SvImJ_T0009718.1 MGP_129S1SvImJ_G0007834.1 mouse_genomes_project 11 71324472 71324565 - Gm22760 miRNA miRNA MGP_129S1SvImJ_T0032201.1 MGP_129S1SvImJ_G0019074.1 mouse_genomes_project 11 101419173 101443740 + MGP_129S1SvImJ_P0032201 Casc3 protein_coding protein_coding MGP_129S1SvImJ_T0032202.1 MGP_129S1SvImJ_G0019074.1 mouse_genomes_project 11 101419322 101443732 + MGP_129S1SvImJ_P0032202 Casc3 protein_coding protein_coding MGP_129S1SvImJ_T0032203.1 MGP_129S1SvImJ_G0019074.1 mouse_genomes_project 11 101419664 101420443 + Casc3 protein_coding processed_transcript MGP_129S1SvImJ_T0032204.1 MGP_129S1SvImJ_G0019074.1 mouse_genomes_project 11 101419675 101431832 + Casc3 protein_coding processed_transcript MGP_129S1SvImJ_T0032139.1 MGP_129S1SvImJ_G0019061.1 mouse_genomes_project 11 100995035 101001763 + MGP_129S1SvImJ_P0032139 Grb7 protein_coding protein_coding MGP_129S1SvImJ_T0032140.1 MGP_129S1SvImJ_G0019061.1 mouse_genomes_project 11 100995475 101005693 + MGP_129S1SvImJ_P0032140 Grb7 protein_coding protein_coding MGP_129S1SvImJ_T0032141.1 MGP_129S1SvImJ_G0019061.1 mouse_genomes_project 11 100995685 101005693 + Grb7 protein_coding retained_intron MGP_129S1SvImJ_T0032142.1 MGP_129S1SvImJ_G0019061.1 mouse_genomes_project 11 100995705 101005693 + Grb7 protein_coding retained_intron MGP_129S1SvImJ_T0032143.1 MGP_129S1SvImJ_G0019061.1 mouse_genomes_project 11 101002186 101004145 + Grb7 protein_coding retained_intron MGP_129S1SvImJ_T0032144.1 MGP_129S1SvImJ_G0019061.1 mouse_genomes_project 11 101004106 101005445 + Grb7 protein_coding retained_intron MGP_129S1SvImJ_T0028325.1 MGP_129S1SvImJ_G0018100.1 mouse_genomes_project 11 25607391 25608572 + MGP_129S1SvImJ_P0028325 Olfr1335 protein_coding protein_coding MGP_129S1SvImJ_T0028326.1 MGP_129S1SvImJ_G0018100.1 mouse_genomes_project 11 25607497 25608572 + MGP_129S1SvImJ_P0028326 Olfr1335 protein_coding protein_coding MGP_129S1SvImJ_T0032485.1 MGP_129S1SvImJ_G0019183.1 mouse_genomes_project 11 103983197 103989455 + MGP_129S1SvImJ_P0032485 Tubg2 protein_coding protein_coding MGP_129S1SvImJ_T0030481.1 MGP_129S1SvImJ_G0018637.1 mouse_genomes_project 11 72957050 72975228 - MGP_129S1SvImJ_P0030481 Tekt1 protein_coding protein_coding MGP_129S1SvImJ_T0030482.1 MGP_129S1SvImJ_G0018637.1 mouse_genomes_project 11 72957050 72974663 - MGP_129S1SvImJ_P0030482 Tekt1 protein_coding protein_coding MGP_129S1SvImJ_T0030483.1 MGP_129S1SvImJ_G0018637.1 mouse_genomes_project 11 72957057 72975799 - MGP_129S1SvImJ_P0030483 Tekt1 protein_coding protein_coding MGP_129S1SvImJ_T0011338.1 MGP_129S1SvImJ_G0009454.1 mouse_genomes_project 11 121332535 121332863 + Gm22667 misc_RNA misc_RNA MGP_129S1SvImJ_T0032223.1 MGP_129S1SvImJ_G0019079.1 mouse_genomes_project 11 101612478 101613315 - MGP_129S1SvImJ_P0032223 Gjd3 protein_coding protein_coding MGP_129S1SvImJ_T0003354.1 MGP_129S1SvImJ_G0003094.1 mouse_genomes_project 11 113346210 113349297 + Gm11684 antisense antisense MGP_129S1SvImJ_T0033247.1 MGP_129S1SvImJ_G0019340.1 mouse_genomes_project 11 113520096 113590234 - MGP_129S1SvImJ_P0033247 Abca8b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0033248.1 MGP_129S1SvImJ_G0019340.1 mouse_genomes_project 11 113522180 113590246 - MGP_129S1SvImJ_P0033248 Abca8b protein_coding protein_coding MGP_129S1SvImJ_T0029591.1 MGP_129S1SvImJ_G0018446.1 mouse_genomes_project 11 61702162 61738956 - MGP_129S1SvImJ_P0029591 Prpsap2 protein_coding protein_coding MGP_129S1SvImJ_T0029592.1 MGP_129S1SvImJ_G0018446.1 mouse_genomes_project 11 61702166 61738880 - Prpsap2 protein_coding processed_transcript MGP_129S1SvImJ_T0029593.1 MGP_129S1SvImJ_G0018446.1 mouse_genomes_project 11 61702166 61738930 - MGP_129S1SvImJ_P0029593 Prpsap2 protein_coding protein_coding MGP_129S1SvImJ_T0029594.1 MGP_129S1SvImJ_G0018446.1 mouse_genomes_project 11 61732537 61738908 - Prpsap2 protein_coding processed_transcript MGP_129S1SvImJ_T0030882.1 MGP_129S1SvImJ_G0018748.1 mouse_genomes_project 11 78400277 78416702 + MGP_129S1SvImJ_P0030882 Git1 protein_coding protein_coding MGP_129S1SvImJ_T0030883.1 MGP_129S1SvImJ_G0018748.1 mouse_genomes_project 11 78400286 78416702 + MGP_129S1SvImJ_P0030883 Git1 protein_coding protein_coding MGP_129S1SvImJ_T0030884.1 MGP_129S1SvImJ_G0018748.1 mouse_genomes_project 11 78407913 78412031 + Git1 protein_coding retained_intron MGP_129S1SvImJ_T0030885.1 MGP_129S1SvImJ_G0018748.1 mouse_genomes_project 11 78409903 78414001 + Git1 protein_coding retained_intron MGP_129S1SvImJ_T0030886.1 MGP_129S1SvImJ_G0018748.1 mouse_genomes_project 11 78411394 78413748 + Git1 protein_coding retained_intron MGP_129S1SvImJ_T0030887.1 MGP_129S1SvImJ_G0018748.1 mouse_genomes_project 11 78414051 78414955 + Git1 protein_coding retained_intron MGP_129S1SvImJ_T0030623.1 MGP_129S1SvImJ_G0018690.1 mouse_genomes_project 11 74984512 74985599 + MGP_129S1SvImJ_P0030623 protein_coding protein_coding MGP_129S1SvImJ_T0032367.1 MGP_129S1SvImJ_G0019158.1 mouse_genomes_project 11 103237692 103289076 - MGP_129S1SvImJ_P0032367 Acly protein_coding protein_coding MGP_129S1SvImJ_T0032368.1 MGP_129S1SvImJ_G0019158.1 mouse_genomes_project 11 103237695 103289076 - MGP_129S1SvImJ_P0032368 Acly protein_coding protein_coding MGP_129S1SvImJ_T0032369.1 MGP_129S1SvImJ_G0019158.1 mouse_genomes_project 11 103237697 103284675 - MGP_129S1SvImJ_P0032369 Acly protein_coding protein_coding MGP_129S1SvImJ_T0032370.1 MGP_129S1SvImJ_G0019158.1 mouse_genomes_project 11 103238565 103240821 - Acly protein_coding processed_transcript MGP_129S1SvImJ_T0032371.1 MGP_129S1SvImJ_G0019158.1 mouse_genomes_project 11 103243570 103255513 - Acly protein_coding processed_transcript MGP_129S1SvImJ_T0032372.1 MGP_129S1SvImJ_G0019158.1 mouse_genomes_project 11 103259313 103260164 - Acly protein_coding processed_transcript MGP_129S1SvImJ_T0032373.1 MGP_129S1SvImJ_G0019158.1 mouse_genomes_project 11 103261644 103288945 - MGP_129S1SvImJ_P0032373 Acly protein_coding protein_coding MGP_129S1SvImJ_T0031973.1 MGP_129S1SvImJ_G0019022.1 mouse_genomes_project 11 99420002 99430180 + MGP_129S1SvImJ_P0031973 Mrpl10 protein_coding protein_coding MGP_129S1SvImJ_T0031974.1 MGP_129S1SvImJ_G0019022.1 mouse_genomes_project 11 99420037 99429485 + MGP_129S1SvImJ_P0031974 Mrpl10 protein_coding protein_coding MGP_129S1SvImJ_T0029316.1 MGP_129S1SvImJ_G0018387.1 mouse_genomes_project 11 58775946 58939738 - MGP_129S1SvImJ_P0029316 Obscn protein_coding protein_coding MGP_129S1SvImJ_T0029317.1 MGP_129S1SvImJ_G0018387.1 mouse_genomes_project 11 58775949 58816874 - MGP_129S1SvImJ_P0029317 Obscn protein_coding protein_coding MGP_129S1SvImJ_T0029318.1 MGP_129S1SvImJ_G0018387.1 mouse_genomes_project 11 58776022 58792837 - MGP_129S1SvImJ_P0029318 Obscn protein_coding unknown_likely_coding MGP_129S1SvImJ_T0029319.1 MGP_129S1SvImJ_G0018387.1 mouse_genomes_project 11 58776022 58792737 - MGP_129S1SvImJ_P0029319 Obscn protein_coding unknown_likely_coding MGP_129S1SvImJ_T0029320.1 MGP_129S1SvImJ_G0018387.1 mouse_genomes_project 11 58794017 58939738 - MGP_129S1SvImJ_P0029320 Obscn protein_coding protein_coding MGP_129S1SvImJ_T0029321.1 MGP_129S1SvImJ_G0018387.1 mouse_genomes_project 11 58794017 58816847 - MGP_129S1SvImJ_P0029321 Obscn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029322.1 MGP_129S1SvImJ_G0018387.1 mouse_genomes_project 11 58794017 58939765 - MGP_129S1SvImJ_P0029322 Obscn protein_coding protein_coding MGP_129S1SvImJ_T0029323.1 MGP_129S1SvImJ_G0018387.1 mouse_genomes_project 11 58794018 58811306 - MGP_129S1SvImJ_P0029323 Obscn protein_coding protein_coding MGP_129S1SvImJ_T0029324.1 MGP_129S1SvImJ_G0018387.1 mouse_genomes_project 11 58794531 58939738 - MGP_129S1SvImJ_P0029324 Obscn protein_coding unknown_likely_coding MGP_129S1SvImJ_T0029325.1 MGP_129S1SvImJ_G0018387.1 mouse_genomes_project 11 58861795 58868350 - MGP_129S1SvImJ_P0029325 Obscn protein_coding protein_coding MGP_129S1SvImJ_T0030355.1 MGP_129S1SvImJ_G0018612.1 mouse_genomes_project 11 71212909 71235342 - MGP_129S1SvImJ_P0030355 Camta2 protein_coding protein_coding MGP_129S1SvImJ_T0030356.1 MGP_129S1SvImJ_G0018612.1 mouse_genomes_project 11 71212909 71235313 - MGP_129S1SvImJ_P0030356 Camta2 protein_coding protein_coding MGP_129S1SvImJ_T0030357.1 MGP_129S1SvImJ_G0018612.1 mouse_genomes_project 11 71212909 71235475 - MGP_129S1SvImJ_P0030357 Camta2 protein_coding protein_coding MGP_129S1SvImJ_T0030358.1 MGP_129S1SvImJ_G0018612.1 mouse_genomes_project 11 71212909 71233759 - MGP_129S1SvImJ_P0030358 Camta2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030359.1 MGP_129S1SvImJ_G0018612.1 mouse_genomes_project 11 71212909 71235323 - MGP_129S1SvImJ_P0030359 Camta2 protein_coding protein_coding MGP_129S1SvImJ_T0030360.1 MGP_129S1SvImJ_G0018612.1 mouse_genomes_project 11 71212909 71235313 - MGP_129S1SvImJ_P0030360 Camta2 protein_coding protein_coding MGP_129S1SvImJ_T0030361.1 MGP_129S1SvImJ_G0018612.1 mouse_genomes_project 11 71212910 71235325 - MGP_129S1SvImJ_P0030361 Camta2 protein_coding protein_coding MGP_129S1SvImJ_T0030362.1 MGP_129S1SvImJ_G0018612.1 mouse_genomes_project 11 71212912 71231146 - Camta2 protein_coding retained_intron MGP_129S1SvImJ_T0030363.1 MGP_129S1SvImJ_G0018612.1 mouse_genomes_project 11 71233283 71235318 - Camta2 protein_coding retained_intron MGP_129S1SvImJ_T0028202.1 MGP_129S1SvImJ_G0018073.1 mouse_genomes_project 11 19190108 19205542 - MGP_129S1SvImJ_P0028202 Mdh1 protein_coding protein_coding MGP_129S1SvImJ_T0028203.1 MGP_129S1SvImJ_G0018073.1 mouse_genomes_project 11 19191811 19193051 - Mdh1 protein_coding processed_transcript MGP_129S1SvImJ_T0028204.1 MGP_129S1SvImJ_G0018073.1 mouse_genomes_project 11 19192843 19197529 - Mdh1 protein_coding processed_transcript MGP_129S1SvImJ_T0028205.1 MGP_129S1SvImJ_G0018073.1 mouse_genomes_project 11 19196217 19205716 - MGP_129S1SvImJ_P0028205 Mdh1 protein_coding protein_coding MGP_129S1SvImJ_T0032313.1 MGP_129S1SvImJ_G0019141.1 mouse_genomes_project 11 102864452 102870009 - MGP_129S1SvImJ_P0032313 Krt13 protein_coding protein_coding MGP_129S1SvImJ_T0032314.1 MGP_129S1SvImJ_G0019141.1 mouse_genomes_project 11 102865026 102865960 - Krt13 protein_coding retained_intron MGP_129S1SvImJ_T0032315.1 MGP_129S1SvImJ_G0019141.1 mouse_genomes_project 11 102866270 102869308 - Krt13 protein_coding processed_transcript MGP_129S1SvImJ_T0029272.1 MGP_129S1SvImJ_G0018360.1 mouse_genomes_project 11 58230969 58285343 - MGP_129S1SvImJ_P0029272 protein_coding protein_coding MGP_129S1SvImJ_T0029275.1 MGP_129S1SvImJ_G0018360.1 mouse_genomes_project 11 58280627 58295042 - MGP_129S1SvImJ_P0029275 protein_coding protein_coding MGP_129S1SvImJ_T0029276.1 MGP_129S1SvImJ_G0018360.1 mouse_genomes_project 11 58293784 58295042 - MGP_129S1SvImJ_P0029276 protein_coding protein_coding MGP_129S1SvImJ_T0003245.1 MGP_129S1SvImJ_G0003007.1 mouse_genomes_project 11 75717562 75718284 - Gm28180 antisense antisense MGP_129S1SvImJ_T0032712.1 MGP_129S1SvImJ_G0019228.1 mouse_genomes_project 11 105227796 105240601 + MGP_129S1SvImJ_P0032712 Asb16 protein_coding protein_coding MGP_129S1SvImJ_T0003145.1 MGP_129S1SvImJ_G0002923.1 mouse_genomes_project 11 14197069 14213295 - Egfros antisense antisense MGP_129S1SvImJ_T0099237.1 MGP_129S1SvImJ_G0037304.1 mouse_genomes_project 11 39683411 39683567 - Gm24446 snRNA snRNA MGP_129S1SvImJ_T0029136.1 MGP_129S1SvImJ_G0018317.1 mouse_genomes_project 11 54000957 54177743 + MGP_129S1SvImJ_P0029136 Rapgef6 protein_coding protein_coding MGP_129S1SvImJ_T0029137.1 MGP_129S1SvImJ_G0018317.1 mouse_genomes_project 11 54000999 54031537 + Rapgef6 protein_coding processed_transcript MGP_129S1SvImJ_T0029138.1 MGP_129S1SvImJ_G0018317.1 mouse_genomes_project 11 54001000 54175437 + MGP_129S1SvImJ_P0029138 Rapgef6 protein_coding protein_coding MGP_129S1SvImJ_T0029139.1 MGP_129S1SvImJ_G0018317.1 mouse_genomes_project 11 54001000 54108780 + MGP_129S1SvImJ_P0029139 Rapgef6 protein_coding protein_coding MGP_129S1SvImJ_T0029140.1 MGP_129S1SvImJ_G0018317.1 mouse_genomes_project 11 54001021 54041035 + Rapgef6 protein_coding processed_transcript MGP_129S1SvImJ_T0029141.1 MGP_129S1SvImJ_G0018317.1 mouse_genomes_project 11 54070013 54112635 + Rapgef6 protein_coding processed_transcript MGP_129S1SvImJ_T0029142.1 MGP_129S1SvImJ_G0018317.1 mouse_genomes_project 11 54096136 54166779 + MGP_129S1SvImJ_P0029142 Rapgef6 protein_coding protein_coding MGP_129S1SvImJ_T0029143.1 MGP_129S1SvImJ_G0018317.1 mouse_genomes_project 11 54096136 54166858 + MGP_129S1SvImJ_P0029143 Rapgef6 protein_coding protein_coding MGP_129S1SvImJ_T0029144.1 MGP_129S1SvImJ_G0018317.1 mouse_genomes_project 11 54170185 54174944 + MGP_129S1SvImJ_P0029144 Rapgef6 protein_coding protein_coding MGP_129S1SvImJ_T0012597.1 MGP_129S1SvImJ_G0010686.1 mouse_genomes_project 11 45835738 45836083 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0030863.1 MGP_129S1SvImJ_G0018745.1 mouse_genomes_project 11 78098527 78298490 + MGP_129S1SvImJ_P0030863 Ssh2 protein_coding protein_coding MGP_129S1SvImJ_T0030864.1 MGP_129S1SvImJ_G0018745.1 mouse_genomes_project 11 78098527 78363957 + MGP_129S1SvImJ_P0030864 Ssh2 protein_coding protein_coding MGP_129S1SvImJ_T0030865.1 MGP_129S1SvImJ_G0018745.1 mouse_genomes_project 11 78248109 78251554 + Ssh2 protein_coding retained_intron MGP_129S1SvImJ_T0030866.1 MGP_129S1SvImJ_G0018745.1 mouse_genomes_project 11 78249645 78320681 + Ssh2 protein_coding processed_transcript MGP_129S1SvImJ_T0030867.1 MGP_129S1SvImJ_G0018745.1 mouse_genomes_project 11 78249647 78359260 + MGP_129S1SvImJ_P0030867 Ssh2 protein_coding protein_coding MGP_129S1SvImJ_T0030868.1 MGP_129S1SvImJ_G0018745.1 mouse_genomes_project 11 78249653 78339203 + Ssh2 protein_coding retained_intron MGP_129S1SvImJ_T0030869.1 MGP_129S1SvImJ_G0018745.1 mouse_genomes_project 11 78296773 78299340 + Ssh2 protein_coding retained_intron MGP_129S1SvImJ_T0099248.1 MGP_129S1SvImJ_G0037315.1 mouse_genomes_project 11 69291311 69291414 + Gm22608 snRNA snRNA MGP_129S1SvImJ_T0012479.1 MGP_129S1SvImJ_G0010568.1 mouse_genomes_project 11 2744311 2744588 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0030094.1 MGP_129S1SvImJ_G0018563.1 mouse_genomes_project 11 70361226 70362561 - MGP_129S1SvImJ_P0030094 Tmem95 protein_coding protein_coding MGP_129S1SvImJ_T0012547.1 MGP_129S1SvImJ_G0010636.1 mouse_genomes_project 11 24739605 24740128 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0030546.1 MGP_129S1SvImJ_G0018653.1 mouse_genomes_project 11 73839395 73851658 + MGP_129S1SvImJ_P0030546 P2rx5 protein_coding protein_coding MGP_129S1SvImJ_T0030547.1 MGP_129S1SvImJ_G0018653.1 mouse_genomes_project 11 73839559 73849471 + MGP_129S1SvImJ_P0030547 P2rx5 protein_coding protein_coding MGP_129S1SvImJ_T0030548.1 MGP_129S1SvImJ_G0018653.1 mouse_genomes_project 11 73839559 73849471 + MGP_129S1SvImJ_P0030548 P2rx5 protein_coding protein_coding MGP_129S1SvImJ_T0032979.1 MGP_129S1SvImJ_G0019281.1 mouse_genomes_project 11 108338816 108353576 + MGP_129S1SvImJ_P0032979 Mettl2 protein_coding protein_coding MGP_129S1SvImJ_T0032980.1 MGP_129S1SvImJ_G0019281.1 mouse_genomes_project 11 108338870 108353576 + Mettl2 protein_coding processed_transcript MGP_129S1SvImJ_T0032981.1 MGP_129S1SvImJ_G0019281.1 mouse_genomes_project 11 108345623 108352167 + Mettl2 protein_coding processed_transcript MGP_129S1SvImJ_T0032982.1 MGP_129S1SvImJ_G0019281.1 mouse_genomes_project 11 108345634 108348831 + Mettl2 protein_coding processed_transcript MGP_129S1SvImJ_T0032983.1 MGP_129S1SvImJ_G0019281.1 mouse_genomes_project 11 108350737 108353576 + Mettl2 protein_coding processed_transcript MGP_129S1SvImJ_T0003161.1 MGP_129S1SvImJ_G0002936.1 mouse_genomes_project 11 34505880 34509823 + Gm12126 antisense antisense MGP_129S1SvImJ_T0009786.1 MGP_129S1SvImJ_G0007902.1 mouse_genomes_project 11 124501250 124501362 - Gm25948 miRNA miRNA MGP_129S1SvImJ_T0100474.1 MGP_129S1SvImJ_G0038541.1 mouse_genomes_project 11 3669553 3669686 - Snora9 snoRNA snoRNA MGP_129S1SvImJ_T0012762.1 MGP_129S1SvImJ_G0010851.1 mouse_genomes_project 11 106994335 106994664 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032877.1 MGP_129S1SvImJ_G0019257.1 mouse_genomes_project 11 106176410 106184538 + MGP_129S1SvImJ_P0032877 Hexim2 protein_coding protein_coding MGP_129S1SvImJ_T0032878.1 MGP_129S1SvImJ_G0019257.1 mouse_genomes_project 11 106179432 106185231 + MGP_129S1SvImJ_P0032878 Hexim2 protein_coding protein_coding MGP_129S1SvImJ_T0032879.1 MGP_129S1SvImJ_G0019257.1 mouse_genomes_project 11 106179457 106184686 + MGP_129S1SvImJ_P0032879 Hexim2 protein_coding protein_coding MGP_129S1SvImJ_T0032880.1 MGP_129S1SvImJ_G0019257.1 mouse_genomes_project 11 106179463 106185916 + MGP_129S1SvImJ_P0032880 Hexim2 protein_coding protein_coding MGP_129S1SvImJ_T0032881.1 MGP_129S1SvImJ_G0019257.1 mouse_genomes_project 11 106179983 106184319 + MGP_129S1SvImJ_P0032881 Hexim2 protein_coding protein_coding MGP_129S1SvImJ_T0012753.1 MGP_129S1SvImJ_G0010842.1 mouse_genomes_project 11 104200610 104200830 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031247.1 MGP_129S1SvImJ_G0018836.1 mouse_genomes_project 11 84240510 84241332 + Slfn5 protein_coding processed_transcript MGP_129S1SvImJ_T0031248.1 MGP_129S1SvImJ_G0018836.1 mouse_genomes_project 11 84241256 84249157 + MGP_129S1SvImJ_P0031248 Slfn5 protein_coding protein_coding MGP_129S1SvImJ_T0031249.1 MGP_129S1SvImJ_G0018836.1 mouse_genomes_project 11 84241263 84252105 + MGP_129S1SvImJ_P0031249 Slfn5 protein_coding protein_coding MGP_129S1SvImJ_T0031250.1 MGP_129S1SvImJ_G0018836.1 mouse_genomes_project 11 84243810 84251051 + MGP_129S1SvImJ_P0031250 Slfn5 protein_coding protein_coding MGP_129S1SvImJ_T0098450.1 MGP_129S1SvImJ_G0036535.1 mouse_genomes_project 11 59663393 59663530 + Gm24939 rRNA rRNA MGP_129S1SvImJ_T0032289.1 MGP_129S1SvImJ_G0019119.1 mouse_genomes_project 11 102502668 102503582 - MGP_129S1SvImJ_P0032289 protein_coding protein_coding MGP_129S1SvImJ_T0003267.1 MGP_129S1SvImJ_G0003026.1 mouse_genomes_project 11 87228739 87247125 - Bcas3os1 antisense antisense MGP_129S1SvImJ_T0003268.1 MGP_129S1SvImJ_G0003026.1 mouse_genomes_project 11 87231810 87247125 - Bcas3os1 antisense antisense MGP_129S1SvImJ_T0032156.1 MGP_129S1SvImJ_G0019065.1 mouse_genomes_project 11 101206097 101222217 + MGP_129S1SvImJ_P0032156 Gsdma3 protein_coding protein_coding MGP_129S1SvImJ_T0032157.1 MGP_129S1SvImJ_G0019065.1 mouse_genomes_project 11 101206097 101222135 + MGP_129S1SvImJ_P0032157 Gsdma3 protein_coding protein_coding MGP_129S1SvImJ_T0003172.1 MGP_129S1SvImJ_G0002947.1 mouse_genomes_project 11 49907382 49908628 - Gm12199 antisense antisense MGP_129S1SvImJ_T0034088.1 MGP_129S1SvImJ_G0019506.1 mouse_genomes_project 11 124961020 124968369 + MGP_129S1SvImJ_P0034088 Slc25a10 protein_coding protein_coding MGP_129S1SvImJ_T0034089.1 MGP_129S1SvImJ_G0019506.1 mouse_genomes_project 11 124961068 124967775 + Slc25a10 protein_coding processed_transcript MGP_129S1SvImJ_T0034090.1 MGP_129S1SvImJ_G0019506.1 mouse_genomes_project 11 124961089 124965095 + Slc25a10 protein_coding processed_transcript MGP_129S1SvImJ_T0034091.1 MGP_129S1SvImJ_G0019506.1 mouse_genomes_project 11 124961095 124966098 + Slc25a10 protein_coding processed_transcript MGP_129S1SvImJ_T0034092.1 MGP_129S1SvImJ_G0019506.1 mouse_genomes_project 11 124965280 124967145 + Slc25a10 protein_coding processed_transcript MGP_129S1SvImJ_T0034093.1 MGP_129S1SvImJ_G0019506.1 mouse_genomes_project 11 124966906 124967459 + Slc25a10 protein_coding processed_transcript MGP_129S1SvImJ_T0006189.1 MGP_129S1SvImJ_G0005169.1 mouse_genomes_project 11 1232993 1234473 + Gm11958 lincRNA lincRNA MGP_129S1SvImJ_T0032257.1 MGP_129S1SvImJ_G0019089.1 mouse_genomes_project 11 102006077 102013131 - MGP_129S1SvImJ_P0032257 Krt27 protein_coding protein_coding MGP_129S1SvImJ_T0012803.1 MGP_129S1SvImJ_G0010892.1 mouse_genomes_project 11 125963261 125963596 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0027702.1 MGP_129S1SvImJ_G0017958.1 mouse_genomes_project 11 360775 366666 + MGP_129S1SvImJ_P0027702 Pla2g3 protein_coding protein_coding MGP_129S1SvImJ_T0027703.1 MGP_129S1SvImJ_G0017958.1 mouse_genomes_project 11 360790 371858 + MGP_129S1SvImJ_P0027703 Pla2g3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027704.1 MGP_129S1SvImJ_G0017958.1 mouse_genomes_project 11 361481 366663 + Pla2g3 protein_coding retained_intron MGP_129S1SvImJ_T0006194.1 MGP_129S1SvImJ_G0005174.1 mouse_genomes_project 11 16034081 16136480 - Gm12023 lincRNA lincRNA MGP_129S1SvImJ_T0003363.1 MGP_129S1SvImJ_G0003102.1 mouse_genomes_project 11 120580534 120590273 + Gm11739 antisense antisense MGP_129S1SvImJ_T0009708.1 MGP_129S1SvImJ_G0007824.1 mouse_genomes_project 11 70090142 70090262 - Mir467f miRNA miRNA MGP_129S1SvImJ_T0034109.1 MGP_129S1SvImJ_G0019513.1 mouse_genomes_project 11 125073646 125084640 + MGP_129S1SvImJ_P0034109 Anapc11 protein_coding protein_coding MGP_129S1SvImJ_T0034110.1 MGP_129S1SvImJ_G0019513.1 mouse_genomes_project 11 125073665 125075914 + Anapc11 protein_coding retained_intron MGP_129S1SvImJ_T0034111.1 MGP_129S1SvImJ_G0019513.1 mouse_genomes_project 11 125073757 125082218 + MGP_129S1SvImJ_P0034111 Anapc11 protein_coding protein_coding MGP_129S1SvImJ_T0034112.1 MGP_129S1SvImJ_G0019513.1 mouse_genomes_project 11 125080385 125081934 + Anapc11 protein_coding processed_transcript MGP_129S1SvImJ_T0030416.1 MGP_129S1SvImJ_G0018621.1 mouse_genomes_project 11 71560782 71581692 - MGP_129S1SvImJ_P0030416 Dhx33 protein_coding protein_coding MGP_129S1SvImJ_T0030417.1 MGP_129S1SvImJ_G0018621.1 mouse_genomes_project 11 71563202 71571482 - MGP_129S1SvImJ_P0030417 Dhx33 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030418.1 MGP_129S1SvImJ_G0018621.1 mouse_genomes_project 11 71563443 71581675 - MGP_129S1SvImJ_P0030418 Dhx33 protein_coding protein_coding MGP_129S1SvImJ_T0030419.1 MGP_129S1SvImJ_G0018621.1 mouse_genomes_project 11 71563443 71581595 - MGP_129S1SvImJ_P0030419 Dhx33 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030420.1 MGP_129S1SvImJ_G0018621.1 mouse_genomes_project 11 71569216 71572690 - Dhx33 protein_coding retained_intron MGP_129S1SvImJ_T0030421.1 MGP_129S1SvImJ_G0018621.1 mouse_genomes_project 11 71569626 71573495 - MGP_129S1SvImJ_P0030421 Dhx33 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030422.1 MGP_129S1SvImJ_G0018621.1 mouse_genomes_project 11 71570611 71571519 - Dhx33 protein_coding retained_intron MGP_129S1SvImJ_T0030423.1 MGP_129S1SvImJ_G0018621.1 mouse_genomes_project 11 71572717 71578403 - Dhx33 protein_coding processed_transcript MGP_129S1SvImJ_T0030424.1 MGP_129S1SvImJ_G0018621.1 mouse_genomes_project 11 71576625 71581692 - Dhx33 protein_coding retained_intron MGP_129S1SvImJ_T0030329.1 MGP_129S1SvImJ_G0018608.1 mouse_genomes_project 11 71190426 71191298 + protein_coding processed_transcript MGP_129S1SvImJ_T0030330.1 MGP_129S1SvImJ_G0018608.1 mouse_genomes_project 11 71190478 71194891 + MGP_129S1SvImJ_P0030330 protein_coding protein_coding MGP_129S1SvImJ_T0030331.1 MGP_129S1SvImJ_G0018608.1 mouse_genomes_project 11 71190478 71194882 + MGP_129S1SvImJ_P0030331 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030332.1 MGP_129S1SvImJ_G0018608.1 mouse_genomes_project 11 71190746 71192957 + MGP_129S1SvImJ_P0030332 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030333.1 MGP_129S1SvImJ_G0018608.1 mouse_genomes_project 11 71190752 71194880 + protein_coding retained_intron MGP_129S1SvImJ_T0030334.1 MGP_129S1SvImJ_G0018608.1 mouse_genomes_project 11 71190760 71191446 + protein_coding retained_intron MGP_129S1SvImJ_T0030335.1 MGP_129S1SvImJ_G0018608.1 mouse_genomes_project 11 71191134 71193526 + protein_coding retained_intron MGP_129S1SvImJ_T0030336.1 MGP_129S1SvImJ_G0018608.1 mouse_genomes_project 11 71191266 71194561 + protein_coding retained_intron MGP_129S1SvImJ_T0030337.1 MGP_129S1SvImJ_G0018608.1 mouse_genomes_project 11 71192313 71192724 + protein_coding retained_intron MGP_129S1SvImJ_T0030338.1 MGP_129S1SvImJ_G0018608.1 mouse_genomes_project 11 71193127 71193526 + protein_coding retained_intron MGP_129S1SvImJ_T0012575.1 MGP_129S1SvImJ_G0010664.1 mouse_genomes_project 11 31696464 31696852 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100545.1 MGP_129S1SvImJ_G0038612.1 mouse_genomes_project 11 124164470 124164550 + Gm23663 snoRNA snoRNA MGP_129S1SvImJ_T0003388.1 MGP_129S1SvImJ_G0003119.1 mouse_genomes_project 11 125140099 125142758 + Notumos antisense antisense MGP_129S1SvImJ_T0032057.1 MGP_129S1SvImJ_G0019042.1 mouse_genomes_project 11 100274981 100285245 + MGP_129S1SvImJ_P0032057 Lasp1 protein_coding protein_coding MGP_129S1SvImJ_T0032058.1 MGP_129S1SvImJ_G0019042.1 mouse_genomes_project 11 100275653 100285725 + Lasp1 protein_coding retained_intron MGP_129S1SvImJ_T0032059.1 MGP_129S1SvImJ_G0019042.1 mouse_genomes_project 11 100275775 100317937 + MGP_129S1SvImJ_P0032059 Lasp1 protein_coding protein_coding MGP_129S1SvImJ_T0032060.1 MGP_129S1SvImJ_G0019042.1 mouse_genomes_project 11 100275819 100312778 + MGP_129S1SvImJ_P0032060 Lasp1 protein_coding protein_coding MGP_129S1SvImJ_T0032061.1 MGP_129S1SvImJ_G0019042.1 mouse_genomes_project 11 100275979 100312766 + MGP_129S1SvImJ_P0032061 Lasp1 protein_coding protein_coding MGP_129S1SvImJ_T0032062.1 MGP_129S1SvImJ_G0019042.1 mouse_genomes_project 11 100276152 100312734 + MGP_129S1SvImJ_P0032062 Lasp1 protein_coding protein_coding MGP_129S1SvImJ_T0032063.1 MGP_129S1SvImJ_G0019042.1 mouse_genomes_project 11 100277893 100303339 + MGP_129S1SvImJ_P0032063 Lasp1 protein_coding protein_coding MGP_129S1SvImJ_T0032064.1 MGP_129S1SvImJ_G0019042.1 mouse_genomes_project 11 100277899 100285325 + MGP_129S1SvImJ_P0032064 Lasp1 protein_coding protein_coding MGP_129S1SvImJ_T0032065.1 MGP_129S1SvImJ_G0019042.1 mouse_genomes_project 11 100279594 100303341 + MGP_129S1SvImJ_P0032065 Lasp1 protein_coding protein_coding MGP_129S1SvImJ_T0032066.1 MGP_129S1SvImJ_G0019042.1 mouse_genomes_project 11 100283597 100315290 + MGP_129S1SvImJ_P0032066 Lasp1 protein_coding protein_coding MGP_129S1SvImJ_T0032067.1 MGP_129S1SvImJ_G0019042.1 mouse_genomes_project 11 100284715 100285306 + MGP_129S1SvImJ_P0032067 Lasp1 protein_coding protein_coding MGP_129S1SvImJ_T0032068.1 MGP_129S1SvImJ_G0019042.1 mouse_genomes_project 11 100284907 100294217 + MGP_129S1SvImJ_P0032068 Lasp1 protein_coding protein_coding MGP_129S1SvImJ_T0032069.1 MGP_129S1SvImJ_G0019042.1 mouse_genomes_project 11 100293682 100303380 + MGP_129S1SvImJ_P0032069 Lasp1 protein_coding protein_coding MGP_129S1SvImJ_T0032070.1 MGP_129S1SvImJ_G0019042.1 mouse_genomes_project 11 100312360 100315376 + Lasp1 protein_coding retained_intron MGP_129S1SvImJ_T0032071.1 MGP_129S1SvImJ_G0019042.1 mouse_genomes_project 11 100312594 100313555 + Lasp1 protein_coding retained_intron MGP_129S1SvImJ_T0012550.1 MGP_129S1SvImJ_G0010639.1 mouse_genomes_project 11 25401601 25402322 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028744.1 MGP_129S1SvImJ_G0018212.1 mouse_genomes_project 11 48032406 48049111 - MGP_129S1SvImJ_P0028744 protein_coding protein_coding MGP_129S1SvImJ_T0031467.1 MGP_129S1SvImJ_G0018893.1 mouse_genomes_project 11 88258204 88266603 + MGP_129S1SvImJ_P0031467 Ptrh2 protein_coding protein_coding MGP_129S1SvImJ_T0031468.1 MGP_129S1SvImJ_G0018893.1 mouse_genomes_project 11 88258204 88266603 + MGP_129S1SvImJ_P0031468 Ptrh2 protein_coding protein_coding MGP_129S1SvImJ_T0012570.1 MGP_129S1SvImJ_G0010659.1 mouse_genomes_project 11 30367695 30368392 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031982.1 MGP_129S1SvImJ_G0019025.1 mouse_genomes_project 11 99522086 99535626 - MGP_129S1SvImJ_P0031982 Tbkbp1 protein_coding protein_coding MGP_129S1SvImJ_T0031983.1 MGP_129S1SvImJ_G0019025.1 mouse_genomes_project 11 99522088 99535626 - MGP_129S1SvImJ_P0031983 Tbkbp1 protein_coding protein_coding MGP_129S1SvImJ_T0031984.1 MGP_129S1SvImJ_G0019025.1 mouse_genomes_project 11 99522092 99535960 - MGP_129S1SvImJ_P0031984 Tbkbp1 protein_coding protein_coding MGP_129S1SvImJ_T0031985.1 MGP_129S1SvImJ_G0019025.1 mouse_genomes_project 11 99523014 99536950 - MGP_129S1SvImJ_P0031985 Tbkbp1 protein_coding protein_coding MGP_129S1SvImJ_T0031986.1 MGP_129S1SvImJ_G0019025.1 mouse_genomes_project 11 99524321 99535962 - MGP_129S1SvImJ_P0031986 Tbkbp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027819.1 MGP_129S1SvImJ_G0017985.1 mouse_genomes_project 11 1606489 1656199 + MGP_129S1SvImJ_P0027819 Ascc2 protein_coding protein_coding MGP_129S1SvImJ_T0027820.1 MGP_129S1SvImJ_G0017985.1 mouse_genomes_project 11 1606489 1658513 + MGP_129S1SvImJ_P0027820 Ascc2 protein_coding protein_coding MGP_129S1SvImJ_T0009763.1 MGP_129S1SvImJ_G0007879.1 mouse_genomes_project 11 105182748 105182859 - Mir8101 miRNA miRNA MGP_129S1SvImJ_T0102125.1 MGP_129S1SvImJ_G0039960.1 mouse_genomes_project 11 5225798 5227669 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0012789.1 MGP_129S1SvImJ_G0010878.1 mouse_genomes_project 11 119520040 119520199 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003238.1 MGP_129S1SvImJ_G0003002.1 mouse_genomes_project 11 69751591 69753885 - Kcnab3os antisense antisense MGP_129S1SvImJ_T0034279.1 MGP_129S1SvImJ_G0019545.1 mouse_genomes_project 11 125820878 125853843 + MGP_129S1SvImJ_P0034279 Foxk2 protein_coding protein_coding MGP_129S1SvImJ_T0034280.1 MGP_129S1SvImJ_G0019545.1 mouse_genomes_project 11 125833030 125840984 + Foxk2 protein_coding processed_transcript MGP_129S1SvImJ_T0034281.1 MGP_129S1SvImJ_G0019545.1 mouse_genomes_project 11 125842465 125843800 + Foxk2 protein_coding retained_intron MGP_129S1SvImJ_T0102153.1 MGP_129S1SvImJ_G0039988.1 mouse_genomes_project 11 96998128 96998863 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0009660.1 MGP_129S1SvImJ_G0007776.1 mouse_genomes_project 11 1067315 1067398 + Mir3060 miRNA miRNA MGP_129S1SvImJ_T0031405.1 MGP_129S1SvImJ_G0018882.1 mouse_genomes_project 11 86855448 87017297 + MGP_129S1SvImJ_P0031405 Bcas3 protein_coding protein_coding MGP_129S1SvImJ_T0031406.1 MGP_129S1SvImJ_G0018882.1 mouse_genomes_project 11 86855448 87357324 + MGP_129S1SvImJ_P0031406 Bcas3 protein_coding protein_coding MGP_129S1SvImJ_T0031407.1 MGP_129S1SvImJ_G0018882.1 mouse_genomes_project 11 86855448 87357324 + MGP_129S1SvImJ_P0031407 Bcas3 protein_coding protein_coding MGP_129S1SvImJ_T0031408.1 MGP_129S1SvImJ_G0018882.1 mouse_genomes_project 11 86855466 86873583 + MGP_129S1SvImJ_P0031408 Bcas3 protein_coding protein_coding MGP_129S1SvImJ_T0031409.1 MGP_129S1SvImJ_G0018882.1 mouse_genomes_project 11 86855493 87356616 + MGP_129S1SvImJ_P0031409 Bcas3 protein_coding protein_coding MGP_129S1SvImJ_T0031410.1 MGP_129S1SvImJ_G0018882.1 mouse_genomes_project 11 86855493 87356616 + MGP_129S1SvImJ_P0031410 Bcas3 protein_coding protein_coding MGP_129S1SvImJ_T0031411.1 MGP_129S1SvImJ_G0018882.1 mouse_genomes_project 11 86970349 87357324 + MGP_129S1SvImJ_P0031411 Bcas3 protein_coding protein_coding MGP_129S1SvImJ_T0031412.1 MGP_129S1SvImJ_G0018882.1 mouse_genomes_project 11 86974942 87001220 + MGP_129S1SvImJ_P0031412 Bcas3 protein_coding protein_coding MGP_129S1SvImJ_T0031413.1 MGP_129S1SvImJ_G0018882.1 mouse_genomes_project 11 86996794 87000141 + Bcas3 protein_coding processed_transcript MGP_129S1SvImJ_T0031414.1 MGP_129S1SvImJ_G0018882.1 mouse_genomes_project 11 87015932 87357324 + MGP_129S1SvImJ_P0031414 Bcas3 protein_coding protein_coding MGP_129S1SvImJ_T0031415.1 MGP_129S1SvImJ_G0018882.1 mouse_genomes_project 11 87015943 87357324 + MGP_129S1SvImJ_P0031415 Bcas3 protein_coding protein_coding MGP_129S1SvImJ_T0031416.1 MGP_129S1SvImJ_G0018882.1 mouse_genomes_project 11 87091435 87113475 + Bcas3 protein_coding processed_transcript MGP_129S1SvImJ_T0031417.1 MGP_129S1SvImJ_G0018882.1 mouse_genomes_project 11 87154033 87357321 + Bcas3 protein_coding processed_transcript MGP_129S1SvImJ_T0031418.1 MGP_129S1SvImJ_G0018882.1 mouse_genomes_project 11 87331832 87356656 + MGP_129S1SvImJ_P0031418 Bcas3 protein_coding protein_coding MGP_129S1SvImJ_T0031419.1 MGP_129S1SvImJ_G0018882.1 mouse_genomes_project 11 87352678 87356912 + Bcas3 protein_coding processed_transcript MGP_129S1SvImJ_T0031420.1 MGP_129S1SvImJ_G0018882.1 mouse_genomes_project 11 87353231 87356573 + Bcas3 protein_coding processed_transcript MGP_129S1SvImJ_T0031447.1 MGP_129S1SvImJ_G0018890.1 mouse_genomes_project 11 88057529 88106445 - MGP_129S1SvImJ_P0031447 Rps6kb1 protein_coding protein_coding MGP_129S1SvImJ_T0031448.1 MGP_129S1SvImJ_G0018890.1 mouse_genomes_project 11 88060698 88106445 - Rps6kb1 protein_coding retained_intron MGP_129S1SvImJ_T0031449.1 MGP_129S1SvImJ_G0018890.1 mouse_genomes_project 11 88061262 88070275 - Rps6kb1 protein_coding processed_transcript MGP_129S1SvImJ_T0031450.1 MGP_129S1SvImJ_G0018890.1 mouse_genomes_project 11 88072258 88078678 - Rps6kb1 protein_coding processed_transcript MGP_129S1SvImJ_T0031451.1 MGP_129S1SvImJ_G0018890.1 mouse_genomes_project 11 88072623 88106414 - MGP_129S1SvImJ_P0031451 Rps6kb1 protein_coding protein_coding MGP_129S1SvImJ_T0031452.1 MGP_129S1SvImJ_G0018890.1 mouse_genomes_project 11 88078282 88093985 - Rps6kb1 protein_coding retained_intron MGP_129S1SvImJ_T0031453.1 MGP_129S1SvImJ_G0018890.1 mouse_genomes_project 11 88093916 88106405 - MGP_129S1SvImJ_P0031453 Rps6kb1 protein_coding protein_coding MGP_129S1SvImJ_T0017210.1 MGP_129S1SvImJ_G0015165.1 mouse_genomes_project 11 32306732 32428464 - 4930469K13Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017196.1 MGP_129S1SvImJ_G0015155.1 mouse_genomes_project 11 16269112 16274425 - 8430419K02Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017197.1 MGP_129S1SvImJ_G0015155.1 mouse_genomes_project 11 16269216 16288493 - 8430419K02Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0102142.1 MGP_129S1SvImJ_G0039977.1 mouse_genomes_project 11 74585400 74585441 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0031254.1 MGP_129S1SvImJ_G0018839.1 mouse_genomes_project 11 84390085 84395735 + MGP_129S1SvImJ_P0031254 Slfn2 protein_coding protein_coding MGP_129S1SvImJ_T0031823.1 MGP_129S1SvImJ_G0018981.1 mouse_genomes_project 11 97528146 97574649 + MGP_129S1SvImJ_P0031823 Fam117a protein_coding protein_coding MGP_129S1SvImJ_T0031824.1 MGP_129S1SvImJ_G0018981.1 mouse_genomes_project 11 97528148 97567860 + Fam117a protein_coding processed_transcript MGP_129S1SvImJ_T0031825.1 MGP_129S1SvImJ_G0018981.1 mouse_genomes_project 11 97531059 97568409 + Fam117a protein_coding processed_transcript MGP_129S1SvImJ_T0031826.1 MGP_129S1SvImJ_G0018981.1 mouse_genomes_project 11 97531061 97555145 + Fam117a protein_coding processed_transcript MGP_129S1SvImJ_T0031827.1 MGP_129S1SvImJ_G0018981.1 mouse_genomes_project 11 97531090 97567864 + Fam117a protein_coding processed_transcript MGP_129S1SvImJ_T0031828.1 MGP_129S1SvImJ_G0018981.1 mouse_genomes_project 11 97568243 97570362 + Fam117a protein_coding processed_transcript MGP_129S1SvImJ_T0032799.1 MGP_129S1SvImJ_G0019240.1 mouse_genomes_project 11 105604256 105607938 + MGP_129S1SvImJ_P0032799 Fzd2 protein_coding protein_coding MGP_129S1SvImJ_T0028163.1 MGP_129S1SvImJ_G0018064.1 mouse_genomes_project 11 17698615 17717614 + Rab1a protein_coding processed_transcript MGP_129S1SvImJ_T0028164.1 MGP_129S1SvImJ_G0018064.1 mouse_genomes_project 11 17698785 17724074 + Rab1a protein_coding processed_transcript MGP_129S1SvImJ_T0028165.1 MGP_129S1SvImJ_G0018064.1 mouse_genomes_project 11 17698806 17727413 + MGP_129S1SvImJ_P0028165 Rab1a protein_coding protein_coding MGP_129S1SvImJ_T0031866.1 MGP_129S1SvImJ_G0018992.1 mouse_genomes_project 11 98108737 98157412 - MGP_129S1SvImJ_P0031866 B4galnt2 protein_coding protein_coding MGP_129S1SvImJ_T0032553.1 MGP_129S1SvImJ_G0019197.1 mouse_genomes_project 11 104219020 104229536 + MGP_129S1SvImJ_P0032553 G6pc protein_coding protein_coding MGP_129S1SvImJ_T0033873.1 MGP_129S1SvImJ_G0019466.1 mouse_genomes_project 11 122716271 122721674 - MGP_129S1SvImJ_P0033873 Lgals3bp protein_coding protein_coding MGP_129S1SvImJ_T0033874.1 MGP_129S1SvImJ_G0019466.1 mouse_genomes_project 11 122716271 122725609 - MGP_129S1SvImJ_P0033874 Lgals3bp protein_coding protein_coding MGP_129S1SvImJ_T0033875.1 MGP_129S1SvImJ_G0019466.1 mouse_genomes_project 11 122720127 122725369 - MGP_129S1SvImJ_P0033875 Lgals3bp protein_coding protein_coding MGP_129S1SvImJ_T0033876.1 MGP_129S1SvImJ_G0019466.1 mouse_genomes_project 11 122720329 122725389 - Lgals3bp protein_coding processed_transcript MGP_129S1SvImJ_T0033877.1 MGP_129S1SvImJ_G0019466.1 mouse_genomes_project 11 122723276 122724554 - MGP_129S1SvImJ_P0033877 Lgals3bp protein_coding protein_coding MGP_129S1SvImJ_T0028670.1 MGP_129S1SvImJ_G0018186.1 mouse_genomes_project 11 44831259 44839927 - MGP_129S1SvImJ_P0028670 Thg1l protein_coding protein_coding MGP_129S1SvImJ_T0028671.1 MGP_129S1SvImJ_G0018186.1 mouse_genomes_project 11 44831259 44839621 - MGP_129S1SvImJ_P0028671 Thg1l protein_coding protein_coding MGP_129S1SvImJ_T0028672.1 MGP_129S1SvImJ_G0018186.1 mouse_genomes_project 11 44834624 44838849 - Thg1l protein_coding processed_transcript MGP_129S1SvImJ_T0028673.1 MGP_129S1SvImJ_G0018186.1 mouse_genomes_project 11 44835606 44839590 - Thg1l protein_coding processed_transcript MGP_129S1SvImJ_T0028674.1 MGP_129S1SvImJ_G0018186.1 mouse_genomes_project 11 44838699 44839916 - Thg1l protein_coding processed_transcript MGP_129S1SvImJ_T0032767.1 MGP_129S1SvImJ_G0019235.1 mouse_genomes_project 11 105407036 105413534 + MGP_129S1SvImJ_P0032767 Grn protein_coding protein_coding MGP_129S1SvImJ_T0032768.1 MGP_129S1SvImJ_G0019235.1 mouse_genomes_project 11 105407239 105411169 + MGP_129S1SvImJ_P0032768 Grn protein_coding protein_coding MGP_129S1SvImJ_T0032769.1 MGP_129S1SvImJ_G0019235.1 mouse_genomes_project 11 105409507 105410980 + Grn protein_coding retained_intron MGP_129S1SvImJ_T0032770.1 MGP_129S1SvImJ_G0019235.1 mouse_genomes_project 11 105410654 105411318 + Grn protein_coding retained_intron MGP_129S1SvImJ_T0032771.1 MGP_129S1SvImJ_G0019235.1 mouse_genomes_project 11 105410821 105411987 + Grn protein_coding retained_intron MGP_129S1SvImJ_T0032772.1 MGP_129S1SvImJ_G0019235.1 mouse_genomes_project 11 105410824 105411616 + Grn protein_coding retained_intron MGP_129S1SvImJ_T0032773.1 MGP_129S1SvImJ_G0019235.1 mouse_genomes_project 11 105411442 105412669 + Grn protein_coding retained_intron MGP_129S1SvImJ_T0032774.1 MGP_129S1SvImJ_G0019235.1 mouse_genomes_project 11 105412009 105413298 + MGP_129S1SvImJ_P0032774 Grn protein_coding protein_coding MGP_129S1SvImJ_T0032775.1 MGP_129S1SvImJ_G0019235.1 mouse_genomes_project 11 105412030 105412789 + Grn protein_coding retained_intron MGP_129S1SvImJ_T0032776.1 MGP_129S1SvImJ_G0019235.1 mouse_genomes_project 11 105412140 105413766 + MGP_129S1SvImJ_P0032776 Grn protein_coding protein_coding MGP_129S1SvImJ_T0030659.1 MGP_129S1SvImJ_G0018701.1 mouse_genomes_project 11 75613807 75620677 + MGP_129S1SvImJ_P0030659 Tsr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030660.1 MGP_129S1SvImJ_G0018701.1 mouse_genomes_project 11 75613814 75625079 + MGP_129S1SvImJ_P0030660 Tsr1 protein_coding protein_coding MGP_129S1SvImJ_T0030661.1 MGP_129S1SvImJ_G0018701.1 mouse_genomes_project 11 75613834 75617592 + Tsr1 protein_coding retained_intron MGP_129S1SvImJ_T0030662.1 MGP_129S1SvImJ_G0018701.1 mouse_genomes_project 11 75613850 75624231 + MGP_129S1SvImJ_P0030662 Tsr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030663.1 MGP_129S1SvImJ_G0018701.1 mouse_genomes_project 11 75617449 75619642 + Tsr1 protein_coding retained_intron MGP_129S1SvImJ_T0030664.1 MGP_129S1SvImJ_G0018701.1 mouse_genomes_project 11 75619706 75624051 + MGP_129S1SvImJ_P0030664 Tsr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030665.1 MGP_129S1SvImJ_G0018701.1 mouse_genomes_project 11 75620947 75624080 + Tsr1 protein_coding retained_intron MGP_129S1SvImJ_T0031107.1 MGP_129S1SvImJ_G0018799.1 mouse_genomes_project 11 80623458 80632175 - MGP_129S1SvImJ_P0031107 protein_coding protein_coding MGP_129S1SvImJ_T0029302.1 MGP_129S1SvImJ_G0018379.1 mouse_genomes_project 11 58643987 58661979 + MGP_129S1SvImJ_P0029302 2810021J22Rik protein_coding protein_coding MGP_129S1SvImJ_T0029303.1 MGP_129S1SvImJ_G0018379.1 mouse_genomes_project 11 58644038 58656697 + MGP_129S1SvImJ_P0029303 2810021J22Rik protein_coding protein_coding MGP_129S1SvImJ_T0003214.1 MGP_129S1SvImJ_G0002983.1 mouse_genomes_project 11 62611806 62613707 - Gm12280 antisense antisense MGP_129S1SvImJ_T0017216.1 MGP_129S1SvImJ_G0015169.1 mouse_genomes_project 11 49783958 49787102 - Gm12198 processed_transcript processed_transcript MGP_129S1SvImJ_T0030628.1 MGP_129S1SvImJ_G0018694.1 mouse_genomes_project 11 75066269 75279529 - MGP_129S1SvImJ_P0030628 Rap1gap2 protein_coding protein_coding MGP_129S1SvImJ_T0030629.1 MGP_129S1SvImJ_G0018694.1 mouse_genomes_project 11 75066396 75279501 - MGP_129S1SvImJ_P0030629 Rap1gap2 protein_coding protein_coding MGP_129S1SvImJ_T0030630.1 MGP_129S1SvImJ_G0018694.1 mouse_genomes_project 11 75066397 75093724 - Rap1gap2 protein_coding processed_transcript MGP_129S1SvImJ_T0030631.1 MGP_129S1SvImJ_G0018694.1 mouse_genomes_project 11 75068847 75213026 - MGP_129S1SvImJ_P0030631 Rap1gap2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0030632.1 MGP_129S1SvImJ_G0018694.1 mouse_genomes_project 11 75122684 75279467 - MGP_129S1SvImJ_P0030632 Rap1gap2 protein_coding protein_coding MGP_129S1SvImJ_T0033373.1 MGP_129S1SvImJ_G0019371.1 mouse_genomes_project 11 119089154 119148188 + Rab37 protein_coding retained_intron MGP_129S1SvImJ_T0033374.1 MGP_129S1SvImJ_G0019371.1 mouse_genomes_project 11 119089154 119162669 + MGP_129S1SvImJ_P0033374 Rab37 protein_coding protein_coding MGP_129S1SvImJ_T0033383.1 MGP_129S1SvImJ_G0019371.1 mouse_genomes_project 11 119154589 119162669 + MGP_129S1SvImJ_P0033383 Rab37 protein_coding protein_coding MGP_129S1SvImJ_T0033384.1 MGP_129S1SvImJ_G0019371.1 mouse_genomes_project 11 119154635 119157982 + Rab37 protein_coding retained_intron MGP_129S1SvImJ_T0028566.1 MGP_129S1SvImJ_G0018160.1 mouse_genomes_project 11 39338888 39352348 - MGP_129S1SvImJ_P0028566 Mat2b protein_coding protein_coding MGP_129S1SvImJ_T0028567.1 MGP_129S1SvImJ_G0018160.1 mouse_genomes_project 11 39338888 39354774 - MGP_129S1SvImJ_P0028567 Mat2b protein_coding protein_coding MGP_129S1SvImJ_T0028568.1 MGP_129S1SvImJ_G0018160.1 mouse_genomes_project 11 39340231 39352195 - MGP_129S1SvImJ_P0028568 Mat2b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028569.1 MGP_129S1SvImJ_G0018160.1 mouse_genomes_project 11 39340285 39344820 - Mat2b protein_coding retained_intron MGP_129S1SvImJ_T0028570.1 MGP_129S1SvImJ_G0018160.1 mouse_genomes_project 11 39344299 39345413 - Mat2b protein_coding retained_intron MGP_129S1SvImJ_T0028571.1 MGP_129S1SvImJ_G0018160.1 mouse_genomes_project 11 39345078 39352202 - Mat2b protein_coding retained_intron MGP_129S1SvImJ_T0028572.1 MGP_129S1SvImJ_G0018160.1 mouse_genomes_project 11 39346932 39354558 - Mat2b protein_coding retained_intron MGP_129S1SvImJ_T0098456.1 MGP_129S1SvImJ_G0036541.1 mouse_genomes_project 11 87963082 87963202 + Gm23667 rRNA rRNA MGP_129S1SvImJ_T0034035.1 MGP_129S1SvImJ_G0019494.1 mouse_genomes_project 11 124793840 124796456 - MGP_129S1SvImJ_P0034035 protein_coding protein_coding MGP_129S1SvImJ_T0034036.1 MGP_129S1SvImJ_G0019494.1 mouse_genomes_project 11 124793926 124796462 - protein_coding retained_intron MGP_129S1SvImJ_T0029933.1 MGP_129S1SvImJ_G0018523.1 mouse_genomes_project 11 69593915 69607883 - MGP_129S1SvImJ_P0029933 Alox8 protein_coding protein_coding MGP_129S1SvImJ_T0029934.1 MGP_129S1SvImJ_G0018523.1 mouse_genomes_project 11 69595078 69607849 - MGP_129S1SvImJ_P0029934 Alox8 protein_coding protein_coding MGP_129S1SvImJ_T0029935.1 MGP_129S1SvImJ_G0018523.1 mouse_genomes_project 11 69599883 69607851 - Alox8 protein_coding retained_intron MGP_129S1SvImJ_T0029936.1 MGP_129S1SvImJ_G0018523.1 mouse_genomes_project 11 69601549 69607424 - Alox8 protein_coding retained_intron MGP_129S1SvImJ_T0006200.1 MGP_129S1SvImJ_G0005179.1 mouse_genomes_project 11 20106507 20107408 - Gm12050 lincRNA lincRNA MGP_129S1SvImJ_T0012782.1 MGP_129S1SvImJ_G0010871.1 mouse_genomes_project 11 115770152 115770929 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032425.1 MGP_129S1SvImJ_G0019171.1 mouse_genomes_project 11 103554032 103586557 - MGP_129S1SvImJ_P0032425 Stat5b protein_coding protein_coding MGP_129S1SvImJ_T0032426.1 MGP_129S1SvImJ_G0019171.1 mouse_genomes_project 11 103574710 103629023 - Stat5b protein_coding processed_transcript MGP_129S1SvImJ_T0017281.1 MGP_129S1SvImJ_G0015203.1 mouse_genomes_project 11 100094015 100112757 - Gm11613 processed_transcript processed_transcript MGP_129S1SvImJ_T0006269.1 MGP_129S1SvImJ_G0005239.1 mouse_genomes_project 11 62817258 62822252 + lincRNA lincRNA MGP_129S1SvImJ_T0003189.1 MGP_129S1SvImJ_G0002962.1 mouse_genomes_project 11 54650945 54653909 + Slc36a3os antisense antisense MGP_129S1SvImJ_T0028439.1 MGP_129S1SvImJ_G0018125.1 mouse_genomes_project 11 30170994 30232844 + MGP_129S1SvImJ_P0028439 Nsg2 protein_coding protein_coding MGP_129S1SvImJ_T0028440.1 MGP_129S1SvImJ_G0018125.1 mouse_genomes_project 11 30170994 30190892 + MGP_129S1SvImJ_P0028440 Nsg2 protein_coding protein_coding MGP_129S1SvImJ_T0028441.1 MGP_129S1SvImJ_G0018125.1 mouse_genomes_project 11 30171033 30206254 + MGP_129S1SvImJ_P0028441 Nsg2 protein_coding protein_coding MGP_129S1SvImJ_T0012535.1 MGP_129S1SvImJ_G0010624.1 mouse_genomes_project 11 19319622 19320268 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028641.1 MGP_129S1SvImJ_G0018179.1 mouse_genomes_project 11 42567440 42629409 - MGP_129S1SvImJ_P0028641 Adra1b protein_coding protein_coding MGP_129S1SvImJ_T0028642.1 MGP_129S1SvImJ_G0018179.1 mouse_genomes_project 11 42567440 42697772 - MGP_129S1SvImJ_P0028642 Adra1b protein_coding protein_coding MGP_129S1SvImJ_T0028643.1 MGP_129S1SvImJ_G0018179.1 mouse_genomes_project 11 42568855 42697772 - MGP_129S1SvImJ_P0028643 Adra1b protein_coding protein_coding MGP_129S1SvImJ_T0012764.1 MGP_129S1SvImJ_G0010853.1 mouse_genomes_project 11 107734922 107735212 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003155.1 MGP_129S1SvImJ_G0002930.1 mouse_genomes_project 11 26319580 26323627 + Gm12081 antisense antisense MGP_129S1SvImJ_T0012530.1 MGP_129S1SvImJ_G0010619.1 mouse_genomes_project 11 18801436 18801973 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012680.1 MGP_129S1SvImJ_G0010769.1 mouse_genomes_project 11 73908606 73908825 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028625.1 MGP_129S1SvImJ_G0018173.1 mouse_genomes_project 11 42237030 42252387 + MGP_129S1SvImJ_P0028625 C1qtnf2 protein_coding protein_coding MGP_129S1SvImJ_T0028626.1 MGP_129S1SvImJ_G0018173.1 mouse_genomes_project 11 42237060 42252407 + MGP_129S1SvImJ_P0028626 C1qtnf2 protein_coding protein_coding MGP_129S1SvImJ_T0028627.1 MGP_129S1SvImJ_G0018173.1 mouse_genomes_project 11 42243519 42251746 + MGP_129S1SvImJ_P0028627 C1qtnf2 protein_coding protein_coding MGP_129S1SvImJ_T0098808.1 MGP_129S1SvImJ_G0036892.1 mouse_genomes_project 11 55020764 55020888 + Gm12238 sense_intronic sense_intronic MGP_129S1SvImJ_T0098811.1 MGP_129S1SvImJ_G0036895.1 mouse_genomes_project 11 81674460 81676143 - C030013C21Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0032936.1 MGP_129S1SvImJ_G0019272.1 mouse_genomes_project 11 107270611 107315019 + MGP_129S1SvImJ_P0032936 Crhr1 protein_coding protein_coding MGP_129S1SvImJ_T0099261.1 MGP_129S1SvImJ_G0037328.1 mouse_genomes_project 11 80749944 80750047 - Gm25867 snRNA snRNA MGP_129S1SvImJ_T0009756.1 MGP_129S1SvImJ_G0007872.1 mouse_genomes_project 11 100522922 100523002 + Gm27597 miRNA miRNA MGP_129S1SvImJ_T0012567.1 MGP_129S1SvImJ_G0010656.1 mouse_genomes_project 11 29024179 29025158 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029226.1 MGP_129S1SvImJ_G0018342.1 mouse_genomes_project 11 57773938 57789871 + MGP_129S1SvImJ_P0029226 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0029227.1 MGP_129S1SvImJ_G0018342.1 mouse_genomes_project 11 57775224 57783668 + MGP_129S1SvImJ_P0029227 protein_coding protein_coding MGP_129S1SvImJ_T0029228.1 MGP_129S1SvImJ_G0018342.1 mouse_genomes_project 11 57786318 57789541 + protein_coding processed_transcript MGP_129S1SvImJ_T0017178.1 MGP_129S1SvImJ_G0015150.1 mouse_genomes_project 11 526715 535293 - Tug1 processed_transcript antisense MGP_129S1SvImJ_T0017179.1 MGP_129S1SvImJ_G0015150.1 mouse_genomes_project 11 526724 536583 - Tug1 processed_transcript antisense MGP_129S1SvImJ_T0017180.1 MGP_129S1SvImJ_G0015150.1 mouse_genomes_project 11 526724 535301 - Tug1 processed_transcript antisense MGP_129S1SvImJ_T0017181.1 MGP_129S1SvImJ_G0015150.1 mouse_genomes_project 11 534615 536813 - Tug1 processed_transcript antisense MGP_129S1SvImJ_T0017182.1 MGP_129S1SvImJ_G0015150.1 mouse_genomes_project 11 535832 537444 - Tug1 processed_transcript TEC MGP_129S1SvImJ_T0012621.1 MGP_129S1SvImJ_G0010710.1 mouse_genomes_project 11 53625201 53626332 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028369.1 MGP_129S1SvImJ_G0018109.1 mouse_genomes_project 11 27561712 27565615 - MGP_129S1SvImJ_P0028369 Rps27a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0028370.1 MGP_129S1SvImJ_G0018109.1 mouse_genomes_project 11 27561719 27564558 - Rps27a protein_coding processed_transcript MGP_129S1SvImJ_T0028371.1 MGP_129S1SvImJ_G0018109.1 mouse_genomes_project 11 27561719 27565747 - MGP_129S1SvImJ_P0028371 Rps27a protein_coding protein_coding MGP_129S1SvImJ_T0028372.1 MGP_129S1SvImJ_G0018109.1 mouse_genomes_project 11 27561719 27565996 - MGP_129S1SvImJ_P0028372 Rps27a protein_coding protein_coding MGP_129S1SvImJ_T0028373.1 MGP_129S1SvImJ_G0018109.1 mouse_genomes_project 11 27561772 27565769 - Rps27a protein_coding processed_transcript MGP_129S1SvImJ_T0028374.1 MGP_129S1SvImJ_G0018109.1 mouse_genomes_project 11 27565002 27565778 - Rps27a protein_coding processed_transcript MGP_129S1SvImJ_T0033367.1 MGP_129S1SvImJ_G0019367.1 mouse_genomes_project 11 118959376 118965130 - MGP_129S1SvImJ_P0033367 protein_coding protein_coding MGP_129S1SvImJ_T0027687.1 MGP_129S1SvImJ_G0017956.1 mouse_genomes_project 11 196606 226104 - Limk2 protein_coding processed_transcript MGP_129S1SvImJ_T0027688.1 MGP_129S1SvImJ_G0017956.1 mouse_genomes_project 11 196606 265556 - MGP_129S1SvImJ_P0027688 Limk2 protein_coding protein_coding MGP_129S1SvImJ_T0027689.1 MGP_129S1SvImJ_G0017956.1 mouse_genomes_project 11 196606 226104 - MGP_129S1SvImJ_P0027689 Limk2 protein_coding protein_coding MGP_129S1SvImJ_T0027690.1 MGP_129S1SvImJ_G0017956.1 mouse_genomes_project 11 198090 225749 - MGP_129S1SvImJ_P0027690 Limk2 protein_coding protein_coding MGP_129S1SvImJ_T0027691.1 MGP_129S1SvImJ_G0017956.1 mouse_genomes_project 11 202436 206374 - Limk2 protein_coding processed_transcript MGP_129S1SvImJ_T0027692.1 MGP_129S1SvImJ_G0017956.1 mouse_genomes_project 11 206326 209429 - Limk2 protein_coding processed_transcript MGP_129S1SvImJ_T0027693.1 MGP_129S1SvImJ_G0017956.1 mouse_genomes_project 11 206964 209764 - Limk2 protein_coding processed_transcript MGP_129S1SvImJ_T0027694.1 MGP_129S1SvImJ_G0017956.1 mouse_genomes_project 11 209428 265556 - Limk2 protein_coding processed_transcript MGP_129S1SvImJ_T0027695.1 MGP_129S1SvImJ_G0017956.1 mouse_genomes_project 11 209745 211538 - Limk2 protein_coding processed_transcript MGP_129S1SvImJ_T0027696.1 MGP_129S1SvImJ_G0017956.1 mouse_genomes_project 11 213029 223891 - Limk2 protein_coding processed_transcript MGP_129S1SvImJ_T0027697.1 MGP_129S1SvImJ_G0017956.1 mouse_genomes_project 11 215312 226063 - Limk2 protein_coding processed_transcript MGP_129S1SvImJ_T0027698.1 MGP_129S1SvImJ_G0017956.1 mouse_genomes_project 11 252039 265571 - Limk2 protein_coding processed_transcript MGP_129S1SvImJ_T0033214.1 MGP_129S1SvImJ_G0019333.1 mouse_genomes_project 11 112983404 112999513 + MGP_129S1SvImJ_P0033214 Amz2 protein_coding protein_coding MGP_129S1SvImJ_T0033215.1 MGP_129S1SvImJ_G0019333.1 mouse_genomes_project 11 112983434 113016035 + MGP_129S1SvImJ_P0033215 Amz2 protein_coding protein_coding MGP_129S1SvImJ_T0033216.1 MGP_129S1SvImJ_G0019333.1 mouse_genomes_project 11 112983440 112988506 + Amz2 protein_coding retained_intron MGP_129S1SvImJ_T0033217.1 MGP_129S1SvImJ_G0019333.1 mouse_genomes_project 11 112983682 112995082 + MGP_129S1SvImJ_P0033217 Amz2 protein_coding protein_coding MGP_129S1SvImJ_T0033218.1 MGP_129S1SvImJ_G0019333.1 mouse_genomes_project 11 112990154 112992715 + Amz2 protein_coding processed_transcript MGP_129S1SvImJ_T0033219.1 MGP_129S1SvImJ_G0019333.1 mouse_genomes_project 11 112991869 112992820 + Amz2 protein_coding retained_intron MGP_129S1SvImJ_T0033220.1 MGP_129S1SvImJ_G0019333.1 mouse_genomes_project 11 112992082 112998616 + Amz2 protein_coding processed_transcript MGP_129S1SvImJ_T0033221.1 MGP_129S1SvImJ_G0019333.1 mouse_genomes_project 11 113002178 113016476 + Amz2 protein_coding processed_transcript MGP_129S1SvImJ_T0029768.1 MGP_129S1SvImJ_G0018486.1 mouse_genomes_project 11 67454007 67486817 + MGP_129S1SvImJ_P0029768 Myh2 protein_coding protein_coding MGP_129S1SvImJ_T0029769.1 MGP_129S1SvImJ_G0018486.1 mouse_genomes_project 11 67454046 67457605 + Myh2 protein_coding retained_intron MGP_129S1SvImJ_T0029770.1 MGP_129S1SvImJ_G0018486.1 mouse_genomes_project 11 67454200 67486812 + MGP_129S1SvImJ_P0029770 Myh2 protein_coding protein_coding MGP_129S1SvImJ_T0017287.1 MGP_129S1SvImJ_G0015209.1 mouse_genomes_project 11 103159827 103160572 + Gm12348 processed_transcript processed_transcript MGP_129S1SvImJ_T0003253.1 MGP_129S1SvImJ_G0003015.1 mouse_genomes_project 11 80585436 80587749 - AU040972 antisense antisense MGP_129S1SvImJ_T0031235.1 MGP_129S1SvImJ_G0018834.1 mouse_genomes_project 11 84189820 84197542 - MGP_129S1SvImJ_P0031235 Nle1 protein_coding protein_coding MGP_129S1SvImJ_T0031236.1 MGP_129S1SvImJ_G0018834.1 mouse_genomes_project 11 84189824 84190875 - Nle1 protein_coding retained_intron MGP_129S1SvImJ_T0031237.1 MGP_129S1SvImJ_G0018834.1 mouse_genomes_project 11 84189832 84193406 - MGP_129S1SvImJ_P0031237 Nle1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031238.1 MGP_129S1SvImJ_G0018834.1 mouse_genomes_project 11 84190797 84193385 - Nle1 protein_coding retained_intron MGP_129S1SvImJ_T0031239.1 MGP_129S1SvImJ_G0018834.1 mouse_genomes_project 11 84193206 84193763 - Nle1 protein_coding retained_intron MGP_129S1SvImJ_T0031240.1 MGP_129S1SvImJ_G0018834.1 mouse_genomes_project 11 84193918 84196818 - MGP_129S1SvImJ_P0031240 Nle1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031241.1 MGP_129S1SvImJ_G0018834.1 mouse_genomes_project 11 84194048 84197473 - Nle1 protein_coding retained_intron MGP_129S1SvImJ_T0006278.1 MGP_129S1SvImJ_G0005246.1 mouse_genomes_project 11 67393151 67400765 - 2310065F04Rik lincRNA lincRNA MGP_129S1SvImJ_T0006279.1 MGP_129S1SvImJ_G0005246.1 mouse_genomes_project 11 67394698 67397540 - 2310065F04Rik lincRNA lincRNA MGP_129S1SvImJ_T0033176.1 MGP_129S1SvImJ_G0019326.1 mouse_genomes_project 11 111809496 111862434 + MGP_129S1SvImJ_P0033176 Apoh protein_coding protein_coding MGP_129S1SvImJ_T0033177.1 MGP_129S1SvImJ_G0019326.1 mouse_genomes_project 11 111852164 111862379 + MGP_129S1SvImJ_P0033177 Apoh protein_coding protein_coding MGP_129S1SvImJ_T0033178.1 MGP_129S1SvImJ_G0019326.1 mouse_genomes_project 11 111852169 111875399 + MGP_129S1SvImJ_P0033178 Apoh protein_coding protein_coding MGP_129S1SvImJ_T0033179.1 MGP_129S1SvImJ_G0019326.1 mouse_genomes_project 11 111861821 111881919 + MGP_129S1SvImJ_P0033179 Apoh protein_coding protein_coding MGP_129S1SvImJ_T0012592.1 MGP_129S1SvImJ_G0010681.1 mouse_genomes_project 11 43216769 43216929 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033280.1 MGP_129S1SvImJ_G0019347.1 mouse_genomes_project 11 114736492 114748971 + MGP_129S1SvImJ_P0033280 Kcnj2 protein_coding protein_coding MGP_129S1SvImJ_T0032808.1 MGP_129S1SvImJ_G0019243.1 mouse_genomes_project 11 105779189 105802967 + MGP_129S1SvImJ_P0032808 Adam11 protein_coding protein_coding MGP_129S1SvImJ_T0032809.1 MGP_129S1SvImJ_G0019243.1 mouse_genomes_project 11 105779189 105802967 + MGP_129S1SvImJ_P0032809 Adam11 protein_coding protein_coding MGP_129S1SvImJ_T0032810.1 MGP_129S1SvImJ_G0019243.1 mouse_genomes_project 11 105780996 105794165 + Adam11 protein_coding processed_transcript MGP_129S1SvImJ_T0032811.1 MGP_129S1SvImJ_G0019243.1 mouse_genomes_project 11 105781093 105794525 + Adam11 protein_coding processed_transcript MGP_129S1SvImJ_T0032812.1 MGP_129S1SvImJ_G0019243.1 mouse_genomes_project 11 105791025 105794458 + Adam11 protein_coding processed_transcript MGP_129S1SvImJ_T0032813.1 MGP_129S1SvImJ_G0019243.1 mouse_genomes_project 11 105794172 105796356 + Adam11 protein_coding processed_transcript MGP_129S1SvImJ_T0032814.1 MGP_129S1SvImJ_G0019243.1 mouse_genomes_project 11 105796775 105798821 + Adam11 protein_coding processed_transcript MGP_129S1SvImJ_T0032815.1 MGP_129S1SvImJ_G0019243.1 mouse_genomes_project 11 105796811 105799098 + Adam11 protein_coding processed_transcript MGP_129S1SvImJ_T0032816.1 MGP_129S1SvImJ_G0019243.1 mouse_genomes_project 11 105799250 105801164 + Adam11 protein_coding processed_transcript MGP_129S1SvImJ_T0028740.1 MGP_129S1SvImJ_G0018208.1 mouse_genomes_project 11 47960564 48101399 - MGP_129S1SvImJ_P0028740 protein_coding protein_coding MGP_129S1SvImJ_T0028745.1 MGP_129S1SvImJ_G0018208.1 mouse_genomes_project 11 48046032 48049068 - MGP_129S1SvImJ_P0028745 protein_coding protein_coding MGP_129S1SvImJ_T0102131.1 MGP_129S1SvImJ_G0039966.1 mouse_genomes_project 11 50192437 50193392 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0006386.1 MGP_129S1SvImJ_G0005323.1 mouse_genomes_project 11 121272558 121273226 + Snhg20 lincRNA lincRNA MGP_129S1SvImJ_T0006387.1 MGP_129S1SvImJ_G0005323.1 mouse_genomes_project 11 121272558 121274724 + Snhg20 lincRNA lincRNA MGP_129S1SvImJ_T0006388.1 MGP_129S1SvImJ_G0005323.1 mouse_genomes_project 11 121272570 121274723 + Snhg20 lincRNA lincRNA MGP_129S1SvImJ_T0017209.1 MGP_129S1SvImJ_G0015164.1 mouse_genomes_project 11 28857022 28863289 + Gm12100 processed_transcript processed_transcript MGP_129S1SvImJ_T0012733.1 MGP_129S1SvImJ_G0010822.1 mouse_genomes_project 11 97368138 97368570 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012609.1 MGP_129S1SvImJ_G0010698.1 mouse_genomes_project 11 50177383 50180725 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033572.1 MGP_129S1SvImJ_G0019407.1 mouse_genomes_project 11 120011014 120046892 + MGP_129S1SvImJ_P0033572 Sap30bp protein_coding protein_coding MGP_129S1SvImJ_T0033573.1 MGP_129S1SvImJ_G0019407.1 mouse_genomes_project 11 120011305 120035052 + Sap30bp protein_coding processed_transcript MGP_129S1SvImJ_T0033574.1 MGP_129S1SvImJ_G0019407.1 mouse_genomes_project 11 120011369 120016140 + Sap30bp protein_coding processed_transcript MGP_129S1SvImJ_T0033575.1 MGP_129S1SvImJ_G0019407.1 mouse_genomes_project 11 120011406 120045702 + Sap30bp protein_coding processed_transcript MGP_129S1SvImJ_T0033576.1 MGP_129S1SvImJ_G0019407.1 mouse_genomes_project 11 120011408 120044628 + MGP_129S1SvImJ_P0033576 Sap30bp protein_coding unknown_likely_coding MGP_129S1SvImJ_T0029173.1 MGP_129S1SvImJ_G0018323.1 mouse_genomes_project 11 54478329 54535089 - MGP_129S1SvImJ_P0029173 Anxa6 protein_coding protein_coding MGP_129S1SvImJ_T0029174.1 MGP_129S1SvImJ_G0018323.1 mouse_genomes_project 11 54478329 54535089 - MGP_129S1SvImJ_P0029174 Anxa6 protein_coding protein_coding MGP_129S1SvImJ_T0029175.1 MGP_129S1SvImJ_G0018323.1 mouse_genomes_project 11 54490403 54535059 - Anxa6 protein_coding processed_transcript MGP_129S1SvImJ_T0031402.1 MGP_129S1SvImJ_G0018880.1 mouse_genomes_project 11 86678106 86726863 - MGP_129S1SvImJ_P0031402 Appbp2 protein_coding protein_coding MGP_129S1SvImJ_T0012541.1 MGP_129S1SvImJ_G0010630.1 mouse_genomes_project 11 20483604 20484041 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0027821.1 MGP_129S1SvImJ_G0017986.1 mouse_genomes_project 11 1678748 1681156 - MGP_129S1SvImJ_P0027821 Uqcr10 protein_coding protein_coding MGP_129S1SvImJ_T0027822.1 MGP_129S1SvImJ_G0017986.1 mouse_genomes_project 11 1678750 1681148 - Uqcr10 protein_coding processed_transcript MGP_129S1SvImJ_T0027823.1 MGP_129S1SvImJ_G0017986.1 mouse_genomes_project 11 1678757 1680867 - Uqcr10 protein_coding processed_transcript MGP_129S1SvImJ_T0029013.1 MGP_129S1SvImJ_G0018286.1 mouse_genomes_project 11 52114295 52549601 + MGP_129S1SvImJ_P0029013 Fstl4 protein_coding protein_coding MGP_129S1SvImJ_T0012648.1 MGP_129S1SvImJ_G0010737.1 mouse_genomes_project 11 60735878 60737212 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028766.1 MGP_129S1SvImJ_G0018222.1 mouse_genomes_project 11 48267481 48283077 + MGP_129S1SvImJ_P0028766 Zfp62 protein_coding protein_coding MGP_129S1SvImJ_T0028767.1 MGP_129S1SvImJ_G0018222.1 mouse_genomes_project 11 48267485 48279804 + MGP_129S1SvImJ_P0028767 Zfp62 protein_coding protein_coding MGP_129S1SvImJ_T0028768.1 MGP_129S1SvImJ_G0018222.1 mouse_genomes_project 11 48267674 48278160 + Zfp62 protein_coding processed_transcript MGP_129S1SvImJ_T0028769.1 MGP_129S1SvImJ_G0018222.1 mouse_genomes_project 11 48267674 48279434 + Zfp62 protein_coding retained_intron MGP_129S1SvImJ_T0028770.1 MGP_129S1SvImJ_G0018222.1 mouse_genomes_project 11 48267674 48279635 + MGP_129S1SvImJ_P0028770 Zfp62 protein_coding protein_coding MGP_129S1SvImJ_T0028771.1 MGP_129S1SvImJ_G0018222.1 mouse_genomes_project 11 48267687 48283340 + MGP_129S1SvImJ_P0028771 Zfp62 protein_coding protein_coding MGP_129S1SvImJ_T0028772.1 MGP_129S1SvImJ_G0018222.1 mouse_genomes_project 11 48267695 48280194 + MGP_129S1SvImJ_P0028772 Zfp62 protein_coding protein_coding MGP_129S1SvImJ_T0028773.1 MGP_129S1SvImJ_G0018222.1 mouse_genomes_project 11 48267923 48279701 + MGP_129S1SvImJ_P0028773 Zfp62 protein_coding protein_coding MGP_129S1SvImJ_T0028774.1 MGP_129S1SvImJ_G0018222.1 mouse_genomes_project 11 48268510 48282287 + MGP_129S1SvImJ_P0028774 Zfp62 protein_coding protein_coding MGP_129S1SvImJ_T0028775.1 MGP_129S1SvImJ_G0018222.1 mouse_genomes_project 11 48277211 48283333 + MGP_129S1SvImJ_P0028775 Zfp62 protein_coding protein_coding MGP_129S1SvImJ_T0028776.1 MGP_129S1SvImJ_G0018222.1 mouse_genomes_project 11 48278115 48279847 + MGP_129S1SvImJ_P0028776 Zfp62 protein_coding protein_coding MGP_129S1SvImJ_T0028777.1 MGP_129S1SvImJ_G0018222.1 mouse_genomes_project 11 48279072 48283333 + MGP_129S1SvImJ_P0028777 Zfp62 protein_coding protein_coding MGP_129S1SvImJ_T0034145.1 MGP_129S1SvImJ_G0019518.1 mouse_genomes_project 11 125115726 125123909 - MGP_129S1SvImJ_P0034145 Pycr1 protein_coding protein_coding MGP_129S1SvImJ_T0034146.1 MGP_129S1SvImJ_G0019518.1 mouse_genomes_project 11 125119654 125123987 - MGP_129S1SvImJ_P0034146 Pycr1 protein_coding protein_coding MGP_129S1SvImJ_T0034147.1 MGP_129S1SvImJ_G0019518.1 mouse_genomes_project 11 125121462 125123882 - MGP_129S1SvImJ_P0034147 Pycr1 protein_coding protein_coding MGP_129S1SvImJ_T0034148.1 MGP_129S1SvImJ_G0019518.1 mouse_genomes_project 11 125121716 125123943 - MGP_129S1SvImJ_P0034148 Pycr1 protein_coding protein_coding MGP_129S1SvImJ_T0034149.1 MGP_129S1SvImJ_G0019518.1 mouse_genomes_project 11 125121952 125124008 - MGP_129S1SvImJ_P0034149 Pycr1 protein_coding protein_coding MGP_129S1SvImJ_T0034150.1 MGP_129S1SvImJ_G0019518.1 mouse_genomes_project 11 125122983 125123943 - Pycr1 protein_coding retained_intron MGP_129S1SvImJ_T0012562.1 MGP_129S1SvImJ_G0010651.1 mouse_genomes_project 11 28618529 28619563 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028488.1 MGP_129S1SvImJ_G0018135.1 mouse_genomes_project 11 30684147 30752016 + MGP_129S1SvImJ_P0028488 Ubtd2 protein_coding protein_coding MGP_129S1SvImJ_T0006354.1 MGP_129S1SvImJ_G0005298.1 mouse_genomes_project 11 105614865 105616520 - Gm11636 lincRNA lincRNA MGP_129S1SvImJ_T0100482.1 MGP_129S1SvImJ_G0038549.1 mouse_genomes_project 11 12807245 12807375 + Gm25490 snoRNA snoRNA MGP_129S1SvImJ_T0033628.1 MGP_129S1SvImJ_G0019417.1 mouse_genomes_project 11 120232100 120257592 - Fbf1 protein_coding processed_transcript MGP_129S1SvImJ_T0033629.1 MGP_129S1SvImJ_G0019417.1 mouse_genomes_project 11 120232100 120236955 - Fbf1 protein_coding processed_transcript MGP_129S1SvImJ_T0033630.1 MGP_129S1SvImJ_G0019417.1 mouse_genomes_project 11 120232100 120257965 - MGP_129S1SvImJ_P0033630 Fbf1 protein_coding protein_coding MGP_129S1SvImJ_T0033631.1 MGP_129S1SvImJ_G0019417.1 mouse_genomes_project 11 120232101 120255726 - MGP_129S1SvImJ_P0033631 Fbf1 protein_coding protein_coding MGP_129S1SvImJ_T0033632.1 MGP_129S1SvImJ_G0019417.1 mouse_genomes_project 11 120233057 120240607 - Fbf1 protein_coding processed_transcript MGP_129S1SvImJ_T0033633.1 MGP_129S1SvImJ_G0019417.1 mouse_genomes_project 11 120244530 120247302 - Fbf1 protein_coding processed_transcript MGP_129S1SvImJ_T0033634.1 MGP_129S1SvImJ_G0019417.1 mouse_genomes_project 11 120244561 120248705 - Fbf1 protein_coding processed_transcript MGP_129S1SvImJ_T0033635.1 MGP_129S1SvImJ_G0019417.1 mouse_genomes_project 11 120244897 120257966 - MGP_129S1SvImJ_P0033635 Fbf1 protein_coding protein_coding MGP_129S1SvImJ_T0033636.1 MGP_129S1SvImJ_G0019417.1 mouse_genomes_project 11 120245788 120255695 - Fbf1 protein_coding processed_transcript MGP_129S1SvImJ_T0033637.1 MGP_129S1SvImJ_G0019417.1 mouse_genomes_project 11 120253140 120257978 - Fbf1 protein_coding processed_transcript MGP_129S1SvImJ_T0033638.1 MGP_129S1SvImJ_G0019417.1 mouse_genomes_project 11 120254491 120257960 - MGP_129S1SvImJ_P0033638 Fbf1 protein_coding protein_coding MGP_129S1SvImJ_T0033639.1 MGP_129S1SvImJ_G0019417.1 mouse_genomes_project 11 120255594 120257577 - Fbf1 protein_coding retained_intron MGP_129S1SvImJ_T0030951.1 MGP_129S1SvImJ_G0018760.1 mouse_genomes_project 11 78994267 78999854 + MGP_129S1SvImJ_P0030951 Dhrs13 protein_coding protein_coding MGP_129S1SvImJ_T0030952.1 MGP_129S1SvImJ_G0018760.1 mouse_genomes_project 11 78994336 78999779 + MGP_129S1SvImJ_P0030952 Dhrs13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030953.1 MGP_129S1SvImJ_G0018760.1 mouse_genomes_project 11 78994339 78999852 + MGP_129S1SvImJ_P0030953 Dhrs13 protein_coding protein_coding MGP_129S1SvImJ_T0030954.1 MGP_129S1SvImJ_G0018760.1 mouse_genomes_project 11 78994346 78995465 + MGP_129S1SvImJ_P0030954 Dhrs13 protein_coding protein_coding MGP_129S1SvImJ_T0034049.1 MGP_129S1SvImJ_G0019498.1 mouse_genomes_project 11 124836729 124904117 - MGP_129S1SvImJ_P0034049 Nploc4 protein_coding protein_coding MGP_129S1SvImJ_T0034050.1 MGP_129S1SvImJ_G0019498.1 mouse_genomes_project 11 124836729 124904117 - MGP_129S1SvImJ_P0034050 Nploc4 protein_coding protein_coding MGP_129S1SvImJ_T0034051.1 MGP_129S1SvImJ_G0019498.1 mouse_genomes_project 11 124838677 124839863 - Nploc4 protein_coding processed_transcript MGP_129S1SvImJ_T0034052.1 MGP_129S1SvImJ_G0019498.1 mouse_genomes_project 11 124865860 124886270 - Nploc4 protein_coding processed_transcript MGP_129S1SvImJ_T0034053.1 MGP_129S1SvImJ_G0019498.1 mouse_genomes_project 11 124875199 124878522 - Nploc4 protein_coding processed_transcript MGP_129S1SvImJ_T0017244.1 MGP_129S1SvImJ_G0015184.1 mouse_genomes_project 11 75904170 75909233 + 1700016P03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0012670.1 MGP_129S1SvImJ_G0010759.1 mouse_genomes_project 11 70640145 70640519 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029065.1 MGP_129S1SvImJ_G0018301.1 mouse_genomes_project 11 53028748 53032127 - MGP_129S1SvImJ_P0029065 Il13 protein_coding protein_coding MGP_129S1SvImJ_T0030002.1 MGP_129S1SvImJ_G0018540.1 mouse_genomes_project 11 70064258 70067360 - MGP_129S1SvImJ_P0030002 Shbg protein_coding protein_coding MGP_129S1SvImJ_T0030003.1 MGP_129S1SvImJ_G0018540.1 mouse_genomes_project 11 70065102 70066395 - Shbg protein_coding processed_transcript MGP_129S1SvImJ_T0012683.1 MGP_129S1SvImJ_G0010772.1 mouse_genomes_project 11 74528204 74530024 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098816.1 MGP_129S1SvImJ_G0036899.1 mouse_genomes_project 11 111847893 111848955 + Gm11656 sense_intronic sense_intronic MGP_129S1SvImJ_T0098817.1 MGP_129S1SvImJ_G0036899.1 mouse_genomes_project 11 111847909 111852094 + Gm11656 sense_intronic sense_intronic MGP_129S1SvImJ_T0003195.1 MGP_129S1SvImJ_G0002967.1 mouse_genomes_project 11 57281817 57284373 - 4933426K07Rik antisense antisense MGP_129S1SvImJ_T0029009.1 MGP_129S1SvImJ_G0018285.1 mouse_genomes_project 11 51713887 51723904 + 9530068E07Rik protein_coding processed_transcript MGP_129S1SvImJ_T0029010.1 MGP_129S1SvImJ_G0018285.1 mouse_genomes_project 11 51713887 51728389 + MGP_129S1SvImJ_P0029010 9530068E07Rik protein_coding protein_coding MGP_129S1SvImJ_T0029011.1 MGP_129S1SvImJ_G0018285.1 mouse_genomes_project 11 51713887 51728384 + MGP_129S1SvImJ_P0029011 9530068E07Rik protein_coding protein_coding MGP_129S1SvImJ_T0029012.1 MGP_129S1SvImJ_G0018285.1 mouse_genomes_project 11 51714105 51722936 + 9530068E07Rik protein_coding processed_transcript MGP_129S1SvImJ_T0009741.1 MGP_129S1SvImJ_G0007857.1 mouse_genomes_project 11 88689980 88690066 + Mir301 miRNA miRNA MGP_129S1SvImJ_T0102130.1 MGP_129S1SvImJ_G0039965.1 mouse_genomes_project 11 50159613 50160614 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0003162.1 MGP_129S1SvImJ_G0002937.1 mouse_genomes_project 11 34715778 34717725 + Gm12127 antisense antisense MGP_129S1SvImJ_T0100515.1 MGP_129S1SvImJ_G0038582.1 mouse_genomes_project 11 73253922 73257097 - Gm24143 snoRNA snoRNA MGP_129S1SvImJ_T0027699.1 MGP_129S1SvImJ_G0017957.1 mouse_genomes_project 11 274143 316053 - MGP_129S1SvImJ_P0027699 Rnf185 protein_coding protein_coding MGP_129S1SvImJ_T0027700.1 MGP_129S1SvImJ_G0017957.1 mouse_genomes_project 11 274143 316053 - MGP_129S1SvImJ_P0027700 Rnf185 protein_coding protein_coding MGP_129S1SvImJ_T0027701.1 MGP_129S1SvImJ_G0017957.1 mouse_genomes_project 11 276037 316024 - Rnf185 protein_coding processed_transcript MGP_129S1SvImJ_T0031033.1 MGP_129S1SvImJ_G0018777.1 mouse_genomes_project 11 79345589 79351268 + MGP_129S1SvImJ_P0031033 Unc119 protein_coding protein_coding MGP_129S1SvImJ_T0031034.1 MGP_129S1SvImJ_G0018777.1 mouse_genomes_project 11 79345605 79349953 + Unc119 protein_coding retained_intron MGP_129S1SvImJ_T0031035.1 MGP_129S1SvImJ_G0018777.1 mouse_genomes_project 11 79345613 79351268 + MGP_129S1SvImJ_P0031035 Unc119 protein_coding protein_coding MGP_129S1SvImJ_T0031036.1 MGP_129S1SvImJ_G0018777.1 mouse_genomes_project 11 79345652 79351000 + Unc119 protein_coding retained_intron MGP_129S1SvImJ_T0031037.1 MGP_129S1SvImJ_G0018777.1 mouse_genomes_project 11 79348769 79351083 + MGP_129S1SvImJ_P0031037 Unc119 protein_coding protein_coding MGP_129S1SvImJ_T0031038.1 MGP_129S1SvImJ_G0018777.1 mouse_genomes_project 11 79349014 79350223 + Unc119 protein_coding retained_intron MGP_129S1SvImJ_T0031039.1 MGP_129S1SvImJ_G0018777.1 mouse_genomes_project 11 79350038 79351102 + Unc119 protein_coding retained_intron MGP_129S1SvImJ_T0028414.1 MGP_129S1SvImJ_G0018118.1 mouse_genomes_project 11 29000833 29222386 + MGP_129S1SvImJ_P0028414 Asb3 protein_coding protein_coding MGP_129S1SvImJ_T0028420.1 MGP_129S1SvImJ_G0018118.1 mouse_genomes_project 11 29073201 29223757 + MGP_129S1SvImJ_P0028420 Asb3 protein_coding protein_coding MGP_129S1SvImJ_T0028421.1 MGP_129S1SvImJ_G0018118.1 mouse_genomes_project 11 29073212 29223757 + MGP_129S1SvImJ_P0028421 Asb3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028422.1 MGP_129S1SvImJ_G0018118.1 mouse_genomes_project 11 29073225 29207156 + MGP_129S1SvImJ_P0028422 Asb3 protein_coding protein_coding MGP_129S1SvImJ_T0028423.1 MGP_129S1SvImJ_G0018118.1 mouse_genomes_project 11 29073254 29148708 + Asb3 protein_coding retained_intron MGP_129S1SvImJ_T0028426.1 MGP_129S1SvImJ_G0018118.1 mouse_genomes_project 11 29118048 29222295 + MGP_129S1SvImJ_P0028426 Asb3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0028427.1 MGP_129S1SvImJ_G0018118.1 mouse_genomes_project 11 29175482 29178761 + Asb3 protein_coding retained_intron MGP_129S1SvImJ_T0032282.1 MGP_129S1SvImJ_G0019112.1 mouse_genomes_project 11 102385986 102386139 - MGP_129S1SvImJ_P0032282 Gm14190 protein_coding protein_coding MGP_129S1SvImJ_T0032899.1 MGP_129S1SvImJ_G0019262.1 mouse_genomes_project 11 106398213 106427758 - MGP_129S1SvImJ_P0032899 Arhgap27 protein_coding protein_coding MGP_129S1SvImJ_T0032900.1 MGP_129S1SvImJ_G0019262.1 mouse_genomes_project 11 106398214 106430552 - Arhgap27 protein_coding retained_intron MGP_129S1SvImJ_T0032901.1 MGP_129S1SvImJ_G0019262.1 mouse_genomes_project 11 106398216 106411395 - MGP_129S1SvImJ_P0032901 Arhgap27 protein_coding protein_coding MGP_129S1SvImJ_T0032902.1 MGP_129S1SvImJ_G0019262.1 mouse_genomes_project 11 106399882 106400823 - Arhgap27 protein_coding retained_intron MGP_129S1SvImJ_T0032903.1 MGP_129S1SvImJ_G0019262.1 mouse_genomes_project 11 106399945 106400112 - Arhgap27 protein_coding processed_transcript MGP_129S1SvImJ_T0032904.1 MGP_129S1SvImJ_G0019262.1 mouse_genomes_project 11 106400181 106400802 - Arhgap27 protein_coding retained_intron MGP_129S1SvImJ_T0032905.1 MGP_129S1SvImJ_G0019262.1 mouse_genomes_project 11 106401980 106406412 - Arhgap27 protein_coding retained_intron MGP_129S1SvImJ_T0032906.1 MGP_129S1SvImJ_G0019262.1 mouse_genomes_project 11 106404469 106405996 - Arhgap27 protein_coding retained_intron MGP_129S1SvImJ_T0032907.1 MGP_129S1SvImJ_G0019262.1 mouse_genomes_project 11 106405921 106423217 - MGP_129S1SvImJ_P0032907 Arhgap27 protein_coding protein_coding MGP_129S1SvImJ_T0032908.1 MGP_129S1SvImJ_G0019262.1 mouse_genomes_project 11 106406824 106423231 - MGP_129S1SvImJ_P0032908 Arhgap27 protein_coding protein_coding MGP_129S1SvImJ_T0032909.1 MGP_129S1SvImJ_G0019262.1 mouse_genomes_project 11 106426596 106430324 - MGP_129S1SvImJ_P0032909 Arhgap27 protein_coding protein_coding MGP_129S1SvImJ_T0028115.1 MGP_129S1SvImJ_G0018050.1 mouse_genomes_project 11 13632305 13661814 + MGP_129S1SvImJ_P0028115 Vstm2a protein_coding protein_coding MGP_129S1SvImJ_T0028116.1 MGP_129S1SvImJ_G0018050.1 mouse_genomes_project 11 13632384 13805143 + MGP_129S1SvImJ_P0028116 Vstm2a protein_coding protein_coding MGP_129S1SvImJ_T0028117.1 MGP_129S1SvImJ_G0018050.1 mouse_genomes_project 11 13632622 13659715 + MGP_129S1SvImJ_P0028117 Vstm2a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0030004.1 MGP_129S1SvImJ_G0018541.1 mouse_genomes_project 11 70074977 70076824 + MGP_129S1SvImJ_P0030004 Sat2 protein_coding protein_coding MGP_129S1SvImJ_T0030005.1 MGP_129S1SvImJ_G0018541.1 mouse_genomes_project 11 70075005 70076412 + Sat2 protein_coding retained_intron MGP_129S1SvImJ_T0030006.1 MGP_129S1SvImJ_G0018541.1 mouse_genomes_project 11 70075005 70076824 + MGP_129S1SvImJ_P0030006 Sat2 protein_coding protein_coding MGP_129S1SvImJ_T0017235.1 MGP_129S1SvImJ_G0015179.1 mouse_genomes_project 11 67278665 67288473 + Gm12299 processed_transcript processed_transcript MGP_129S1SvImJ_T0034256.1 MGP_129S1SvImJ_G0019538.1 mouse_genomes_project 11 125647322 125649785 - MGP_129S1SvImJ_P0034256 Tex19.2 protein_coding protein_coding MGP_129S1SvImJ_T0012549.1 MGP_129S1SvImJ_G0010638.1 mouse_genomes_project 11 25319117 25319514 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028705.1 MGP_129S1SvImJ_G0018198.1 mouse_genomes_project 11 45530295 45552450 - MGP_129S1SvImJ_P0028705 Dppa1 protein_coding protein_coding MGP_129S1SvImJ_T0028706.1 MGP_129S1SvImJ_G0018198.1 mouse_genomes_project 11 45531233 45552450 - MGP_129S1SvImJ_P0028706 Dppa1 protein_coding protein_coding MGP_129S1SvImJ_T0003141.1 MGP_129S1SvImJ_G0002921.1 mouse_genomes_project 11 9167230 9184253 + 1700042O10Rik antisense antisense MGP_129S1SvImJ_T0003171.1 MGP_129S1SvImJ_G0002946.1 mouse_genomes_project 11 49292772 49293695 - Gm12195 antisense antisense MGP_129S1SvImJ_T0031337.1 MGP_129S1SvImJ_G0018867.1 mouse_genomes_project 11 85532883 85628943 + MGP_129S1SvImJ_P0031337 protein_coding protein_coding MGP_129S1SvImJ_T0031338.1 MGP_129S1SvImJ_G0018867.1 mouse_genomes_project 11 85532911 85536314 + protein_coding processed_transcript MGP_129S1SvImJ_T0031340.1 MGP_129S1SvImJ_G0018867.1 mouse_genomes_project 11 85575804 85649984 + protein_coding retained_intron MGP_129S1SvImJ_T0031341.1 MGP_129S1SvImJ_G0018867.1 mouse_genomes_project 11 85583402 85646107 + MGP_129S1SvImJ_P0031341 protein_coding protein_coding MGP_129S1SvImJ_T0031342.1 MGP_129S1SvImJ_G0018867.1 mouse_genomes_project 11 85583402 85628837 + MGP_129S1SvImJ_P0031342 protein_coding protein_coding MGP_129S1SvImJ_T0031343.1 MGP_129S1SvImJ_G0018867.1 mouse_genomes_project 11 85583856 85814142 + MGP_129S1SvImJ_P0031343 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0031344.1 MGP_129S1SvImJ_G0018867.1 mouse_genomes_project 11 85695147 85724182 + MGP_129S1SvImJ_P0031344 protein_coding protein_coding MGP_129S1SvImJ_T0033746.1 MGP_129S1SvImJ_G0019440.1 mouse_genomes_project 11 121000269 121006128 - Jmjd6 protein_coding retained_intron MGP_129S1SvImJ_T0033747.1 MGP_129S1SvImJ_G0019440.1 mouse_genomes_project 11 121000269 121006296 - MGP_129S1SvImJ_P0033747 Jmjd6 protein_coding protein_coding MGP_129S1SvImJ_T0033748.1 MGP_129S1SvImJ_G0019440.1 mouse_genomes_project 11 121000270 121006137 - Jmjd6 protein_coding retained_intron MGP_129S1SvImJ_T0033749.1 MGP_129S1SvImJ_G0019440.1 mouse_genomes_project 11 121000270 121006202 - MGP_129S1SvImJ_P0033749 Jmjd6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033750.1 MGP_129S1SvImJ_G0019440.1 mouse_genomes_project 11 121000272 121004083 - MGP_129S1SvImJ_P0033750 Jmjd6 protein_coding protein_coding MGP_129S1SvImJ_T0033751.1 MGP_129S1SvImJ_G0019440.1 mouse_genomes_project 11 121000425 121005552 - MGP_129S1SvImJ_P0033751 Jmjd6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033752.1 MGP_129S1SvImJ_G0019440.1 mouse_genomes_project 11 121000450 121005567 - MGP_129S1SvImJ_P0033752 Jmjd6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032644.1 MGP_129S1SvImJ_G0019217.1 mouse_genomes_project 11 104941700 104969627 - Mpp3 protein_coding processed_transcript MGP_129S1SvImJ_T0032645.1 MGP_129S1SvImJ_G0019217.1 mouse_genomes_project 11 104941700 104968776 - MGP_129S1SvImJ_P0032645 Mpp3 protein_coding protein_coding MGP_129S1SvImJ_T0032646.1 MGP_129S1SvImJ_G0019217.1 mouse_genomes_project 11 104941700 104971188 - MGP_129S1SvImJ_P0032646 Mpp3 protein_coding protein_coding MGP_129S1SvImJ_T0032647.1 MGP_129S1SvImJ_G0019217.1 mouse_genomes_project 11 104941700 104969648 - MGP_129S1SvImJ_P0032647 Mpp3 protein_coding protein_coding MGP_129S1SvImJ_T0032648.1 MGP_129S1SvImJ_G0019217.1 mouse_genomes_project 11 104950547 104952329 - Mpp3 protein_coding retained_intron MGP_129S1SvImJ_T0032649.1 MGP_129S1SvImJ_G0019217.1 mouse_genomes_project 11 104959285 104969630 - MGP_129S1SvImJ_P0032649 Mpp3 protein_coding protein_coding MGP_129S1SvImJ_T0032650.1 MGP_129S1SvImJ_G0019217.1 mouse_genomes_project 11 104963047 104969627 - Mpp3 protein_coding processed_transcript MGP_129S1SvImJ_T0032651.1 MGP_129S1SvImJ_G0019217.1 mouse_genomes_project 11 104966119 104968539 - Mpp3 protein_coding processed_transcript MGP_129S1SvImJ_T0032652.1 MGP_129S1SvImJ_G0019217.1 mouse_genomes_project 11 104968068 104969448 - Mpp3 protein_coding processed_transcript MGP_129S1SvImJ_T0033897.1 MGP_129S1SvImJ_G0019470.1 mouse_genomes_project 11 122814788 123251258 - MGP_129S1SvImJ_P0033897 Rbfox3 protein_coding protein_coding MGP_129S1SvImJ_T0033898.1 MGP_129S1SvImJ_G0019470.1 mouse_genomes_project 11 122814790 123099562 - MGP_129S1SvImJ_P0033898 Rbfox3 protein_coding protein_coding MGP_129S1SvImJ_T0033899.1 MGP_129S1SvImJ_G0019470.1 mouse_genomes_project 11 122816181 123251270 - MGP_129S1SvImJ_P0033899 Rbfox3 protein_coding protein_coding MGP_129S1SvImJ_T0033900.1 MGP_129S1SvImJ_G0019470.1 mouse_genomes_project 11 122816181 123253315 - MGP_129S1SvImJ_P0033900 Rbfox3 protein_coding protein_coding MGP_129S1SvImJ_T0033901.1 MGP_129S1SvImJ_G0019470.1 mouse_genomes_project 11 122816229 123251258 - MGP_129S1SvImJ_P0033901 Rbfox3 protein_coding protein_coding MGP_129S1SvImJ_T0033902.1 MGP_129S1SvImJ_G0019470.1 mouse_genomes_project 11 122817020 123251260 - MGP_129S1SvImJ_P0033902 Rbfox3 protein_coding protein_coding MGP_129S1SvImJ_T0033903.1 MGP_129S1SvImJ_G0019470.1 mouse_genomes_project 11 122821527 122834553 - MGP_129S1SvImJ_P0033903 Rbfox3 protein_coding protein_coding MGP_129S1SvImJ_T0033904.1 MGP_129S1SvImJ_G0019470.1 mouse_genomes_project 11 122830041 122901885 - MGP_129S1SvImJ_P0033904 Rbfox3 protein_coding protein_coding MGP_129S1SvImJ_T0033905.1 MGP_129S1SvImJ_G0019470.1 mouse_genomes_project 11 123152340 123230353 - Rbfox3 protein_coding processed_transcript MGP_129S1SvImJ_T0033906.1 MGP_129S1SvImJ_G0019470.1 mouse_genomes_project 11 123152342 123249713 - Rbfox3 protein_coding processed_transcript MGP_129S1SvImJ_T0012650.1 MGP_129S1SvImJ_G0010739.1 mouse_genomes_project 11 61077055 61077772 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012757.1 MGP_129S1SvImJ_G0010846.1 mouse_genomes_project 11 105470939 105471110 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031327.1 MGP_129S1SvImJ_G0018865.1 mouse_genomes_project 11 85445932 85468400 - MGP_129S1SvImJ_P0031327 Dusp14 protein_coding protein_coding MGP_129S1SvImJ_T0031328.1 MGP_129S1SvImJ_G0018865.1 mouse_genomes_project 11 85445932 85467956 - MGP_129S1SvImJ_P0031328 Dusp14 protein_coding protein_coding MGP_129S1SvImJ_T0031329.1 MGP_129S1SvImJ_G0018865.1 mouse_genomes_project 11 85445936 85468178 - MGP_129S1SvImJ_P0031329 Dusp14 protein_coding protein_coding MGP_129S1SvImJ_T0031330.1 MGP_129S1SvImJ_G0018865.1 mouse_genomes_project 11 85446305 85466679 - MGP_129S1SvImJ_P0031330 Dusp14 protein_coding protein_coding MGP_129S1SvImJ_T0031331.1 MGP_129S1SvImJ_G0018865.1 mouse_genomes_project 11 85446871 85468860 - MGP_129S1SvImJ_P0031331 Dusp14 protein_coding protein_coding MGP_129S1SvImJ_T0030049.1 MGP_129S1SvImJ_G0018549.1 mouse_genomes_project 11 70141857 70144566 - MGP_129S1SvImJ_P0030049 Tnfsf13 protein_coding protein_coding MGP_129S1SvImJ_T0030050.1 MGP_129S1SvImJ_G0018549.1 mouse_genomes_project 11 70141943 70144796 - MGP_129S1SvImJ_P0030050 Tnfsf13 protein_coding protein_coding MGP_129S1SvImJ_T0006212.1 MGP_129S1SvImJ_G0005191.1 mouse_genomes_project 11 22529615 22540138 - Gm10466 lincRNA lincRNA MGP_129S1SvImJ_T0032261.1 MGP_129S1SvImJ_G0019093.1 mouse_genomes_project 11 102095354 102105038 - MGP_129S1SvImJ_P0032261 Krt20 protein_coding protein_coding MGP_129S1SvImJ_T0030534.1 MGP_129S1SvImJ_G0018648.1 mouse_genomes_project 11 73666372 73682452 + MGP_129S1SvImJ_P0030534 P2rx1 protein_coding protein_coding MGP_129S1SvImJ_T0030535.1 MGP_129S1SvImJ_G0018648.1 mouse_genomes_project 11 73666584 73681378 + MGP_129S1SvImJ_P0030535 P2rx1 protein_coding protein_coding MGP_129S1SvImJ_T0030536.1 MGP_129S1SvImJ_G0018648.1 mouse_genomes_project 11 73677042 73682449 + P2rx1 protein_coding retained_intron MGP_129S1SvImJ_T0032145.1 MGP_129S1SvImJ_G0019062.1 mouse_genomes_project 11 101015206 101105655 - MGP_129S1SvImJ_P0032145 Ikzf3 protein_coding protein_coding MGP_129S1SvImJ_T0032146.1 MGP_129S1SvImJ_G0019062.1 mouse_genomes_project 11 101017562 101028759 - Ikzf3 protein_coding processed_transcript MGP_129S1SvImJ_T0032147.1 MGP_129S1SvImJ_G0019062.1 mouse_genomes_project 11 101035587 101041734 - Ikzf3 protein_coding processed_transcript MGP_129S1SvImJ_T0032148.1 MGP_129S1SvImJ_G0019062.1 mouse_genomes_project 11 101065407 101105886 - Ikzf3 protein_coding retained_intron MGP_129S1SvImJ_T0017260.1 MGP_129S1SvImJ_G0015192.1 mouse_genomes_project 11 86278343 86280034 + 4930502E09Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0030537.1 MGP_129S1SvImJ_G0018649.1 mouse_genomes_project 11 73686249 73711052 + Camkk1 protein_coding retained_intron MGP_129S1SvImJ_T0030538.1 MGP_129S1SvImJ_G0018649.1 mouse_genomes_project 11 73686284 73711063 + MGP_129S1SvImJ_P0030538 Camkk1 protein_coding protein_coding MGP_129S1SvImJ_T0030539.1 MGP_129S1SvImJ_G0018649.1 mouse_genomes_project 11 73693826 73709282 + MGP_129S1SvImJ_P0030539 Camkk1 protein_coding protein_coding MGP_129S1SvImJ_T0012627.1 MGP_129S1SvImJ_G0010716.1 mouse_genomes_project 11 54637634 54637877 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028797.1 MGP_129S1SvImJ_G0018230.1 mouse_genomes_project 11 48564840 48577796 + MGP_129S1SvImJ_P0028797 Olfr1386 protein_coding protein_coding MGP_129S1SvImJ_T0027805.1 MGP_129S1SvImJ_G0017982.1 mouse_genomes_project 11 1302450 1402041 - MGP_129S1SvImJ_P0027805 Hormad2 protein_coding protein_coding MGP_129S1SvImJ_T0027806.1 MGP_129S1SvImJ_G0017982.1 mouse_genomes_project 11 1302450 1402399 - MGP_129S1SvImJ_P0027806 Hormad2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027807.1 MGP_129S1SvImJ_G0017982.1 mouse_genomes_project 11 1303019 1402378 - MGP_129S1SvImJ_P0027807 Hormad2 protein_coding protein_coding MGP_129S1SvImJ_T0027808.1 MGP_129S1SvImJ_G0017982.1 mouse_genomes_project 11 1385043 1388238 - Hormad2 protein_coding processed_transcript MGP_129S1SvImJ_T0027809.1 MGP_129S1SvImJ_G0017982.1 mouse_genomes_project 11 1385223 1402401 - MGP_129S1SvImJ_P0027809 Hormad2 protein_coding protein_coding MGP_129S1SvImJ_T0027810.1 MGP_129S1SvImJ_G0017982.1 mouse_genomes_project 11 1388289 1396676 - Hormad2 protein_coding processed_transcript MGP_129S1SvImJ_T0006294.1 MGP_129S1SvImJ_G0005258.1 mouse_genomes_project 11 76167081 76167693 - Gm12336 lincRNA lincRNA MGP_129S1SvImJ_T0030324.1 MGP_129S1SvImJ_G0018607.1 mouse_genomes_project 11 71187387 71190250 - MGP_129S1SvImJ_P0030324 Slc25a11 protein_coding protein_coding MGP_129S1SvImJ_T0030325.1 MGP_129S1SvImJ_G0018607.1 mouse_genomes_project 11 71187886 71189102 - Slc25a11 protein_coding retained_intron MGP_129S1SvImJ_T0030326.1 MGP_129S1SvImJ_G0018607.1 mouse_genomes_project 11 71188422 71190671 - MGP_129S1SvImJ_P0030326 Slc25a11 protein_coding protein_coding MGP_129S1SvImJ_T0030327.1 MGP_129S1SvImJ_G0018607.1 mouse_genomes_project 11 71189100 71190170 - Slc25a11 protein_coding retained_intron MGP_129S1SvImJ_T0030328.1 MGP_129S1SvImJ_G0018607.1 mouse_genomes_project 11 71189106 71190091 - MGP_129S1SvImJ_P0030328 Slc25a11 protein_coding protein_coding MGP_129S1SvImJ_T0030152.1 MGP_129S1SvImJ_G0018572.1 mouse_genomes_project 11 70454653 70456799 + MGP_129S1SvImJ_P0030152 Cldn7 protein_coding protein_coding MGP_129S1SvImJ_T0030153.1 MGP_129S1SvImJ_G0018572.1 mouse_genomes_project 11 70455756 70457719 + MGP_129S1SvImJ_P0030153 Cldn7 protein_coding protein_coding MGP_129S1SvImJ_T0030154.1 MGP_129S1SvImJ_G0018572.1 mouse_genomes_project 11 70456747 70457482 + MGP_129S1SvImJ_P0030154 Cldn7 protein_coding protein_coding MGP_129S1SvImJ_T0030586.1 MGP_129S1SvImJ_G0018670.1 mouse_genomes_project 11 74294971 74296209 + MGP_129S1SvImJ_P0030586 Olfr384 protein_coding protein_coding MGP_129S1SvImJ_T0029312.1 MGP_129S1SvImJ_G0018385.1 mouse_genomes_project 11 58745771 58753538 + MGP_129S1SvImJ_P0029312 Trim17 protein_coding protein_coding MGP_129S1SvImJ_T0028665.1 MGP_129S1SvImJ_G0018184.1 mouse_genomes_project 11 44733544 44793609 + MGP_129S1SvImJ_P0028665 Clint1 protein_coding protein_coding MGP_129S1SvImJ_T0028666.1 MGP_129S1SvImJ_G0018184.1 mouse_genomes_project 11 44733544 44793609 + MGP_129S1SvImJ_P0028666 Clint1 protein_coding protein_coding MGP_129S1SvImJ_T0028667.1 MGP_129S1SvImJ_G0018184.1 mouse_genomes_project 11 44766308 44793609 + Clint1 protein_coding processed_transcript MGP_129S1SvImJ_T0032302.1 MGP_129S1SvImJ_G0019132.1 mouse_genomes_project 11 102720213 102722101 - MGP_129S1SvImJ_P0032302 Krtap16-1 protein_coding protein_coding MGP_129S1SvImJ_T0030943.1 MGP_129S1SvImJ_G0018759.1 mouse_genomes_project 11 78941390 78988202 + MGP_129S1SvImJ_P0030943 Phf12 protein_coding protein_coding MGP_129S1SvImJ_T0030944.1 MGP_129S1SvImJ_G0018759.1 mouse_genomes_project 11 78941438 78992527 + MGP_129S1SvImJ_P0030944 Phf12 protein_coding protein_coding MGP_129S1SvImJ_T0030945.1 MGP_129S1SvImJ_G0018759.1 mouse_genomes_project 11 78984239 78988180 + MGP_129S1SvImJ_P0030945 Phf12 protein_coding protein_coding MGP_129S1SvImJ_T0030946.1 MGP_129S1SvImJ_G0018759.1 mouse_genomes_project 11 78984453 78987949 + Phf12 protein_coding retained_intron MGP_129S1SvImJ_T0030947.1 MGP_129S1SvImJ_G0018759.1 mouse_genomes_project 11 78984487 78988170 + MGP_129S1SvImJ_P0030947 Phf12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030948.1 MGP_129S1SvImJ_G0018759.1 mouse_genomes_project 11 78984554 78990835 + MGP_129S1SvImJ_P0030948 Phf12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030949.1 MGP_129S1SvImJ_G0018759.1 mouse_genomes_project 11 78984577 78988004 + MGP_129S1SvImJ_P0030949 Phf12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030950.1 MGP_129S1SvImJ_G0018759.1 mouse_genomes_project 11 78990097 78991565 + Phf12 protein_coding retained_intron MGP_129S1SvImJ_T0033516.1 MGP_129S1SvImJ_G0019398.1 mouse_genomes_project 11 119689745 119754325 - MGP_129S1SvImJ_P0033516 Grb2 protein_coding protein_coding MGP_129S1SvImJ_T0033517.1 MGP_129S1SvImJ_G0019398.1 mouse_genomes_project 11 119689745 119754552 - MGP_129S1SvImJ_P0033517 Grb2 protein_coding protein_coding MGP_129S1SvImJ_T0033518.1 MGP_129S1SvImJ_G0019398.1 mouse_genomes_project 11 119689745 119764087 - MGP_129S1SvImJ_P0033518 Grb2 protein_coding protein_coding MGP_129S1SvImJ_T0033519.1 MGP_129S1SvImJ_G0019398.1 mouse_genomes_project 11 119690350 119764066 - MGP_129S1SvImJ_P0033519 Grb2 protein_coding protein_coding MGP_129S1SvImJ_T0033520.1 MGP_129S1SvImJ_G0019398.1 mouse_genomes_project 11 119697979 119754946 - MGP_129S1SvImJ_P0033520 Grb2 protein_coding protein_coding MGP_129S1SvImJ_T0029029.1 MGP_129S1SvImJ_G0018291.1 mouse_genomes_project 11 52809317 52812223 - MGP_129S1SvImJ_P0029029 Uqcrq protein_coding protein_coding MGP_129S1SvImJ_T0029030.1 MGP_129S1SvImJ_G0018291.1 mouse_genomes_project 11 52810348 52812227 - Uqcrq protein_coding processed_transcript MGP_129S1SvImJ_T0029031.1 MGP_129S1SvImJ_G0018291.1 mouse_genomes_project 11 52810348 52812223 - MGP_129S1SvImJ_P0029031 Uqcrq protein_coding protein_coding MGP_129S1SvImJ_T0029032.1 MGP_129S1SvImJ_G0018291.1 mouse_genomes_project 11 52810348 52811830 - MGP_129S1SvImJ_P0029032 Uqcrq protein_coding protein_coding MGP_129S1SvImJ_T0009676.1 MGP_129S1SvImJ_G0007792.1 mouse_genomes_project 11 31249886 31249970 - Gm26052 miRNA miRNA MGP_129S1SvImJ_T0003261.1 MGP_129S1SvImJ_G0003022.1 mouse_genomes_project 11 82807152 82813252 + Gm11418 antisense antisense MGP_129S1SvImJ_T0032518.1 MGP_129S1SvImJ_G0019190.1 mouse_genomes_project 11 104103708 104120561 + MGP_129S1SvImJ_P0032518 Wnk4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032519.1 MGP_129S1SvImJ_G0019190.1 mouse_genomes_project 11 104103739 104120561 + MGP_129S1SvImJ_P0032519 Wnk4 protein_coding protein_coding MGP_129S1SvImJ_T0032520.1 MGP_129S1SvImJ_G0019190.1 mouse_genomes_project 11 104103796 104120426 + MGP_129S1SvImJ_P0032520 Wnk4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032521.1 MGP_129S1SvImJ_G0019190.1 mouse_genomes_project 11 104108441 104117254 + MGP_129S1SvImJ_P0032521 Wnk4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032522.1 MGP_129S1SvImJ_G0019190.1 mouse_genomes_project 11 104119797 104120558 + MGP_129S1SvImJ_P0032522 Wnk4 protein_coding protein_coding MGP_129S1SvImJ_T0032796.1 MGP_129S1SvImJ_G0019239.1 mouse_genomes_project 11 105561794 105564850 - MGP_129S1SvImJ_P0032796 Gm11627 protein_coding protein_coding MGP_129S1SvImJ_T0032797.1 MGP_129S1SvImJ_G0019239.1 mouse_genomes_project 11 105561840 105564664 - Gm11627 protein_coding processed_transcript MGP_129S1SvImJ_T0032798.1 MGP_129S1SvImJ_G0019239.1 mouse_genomes_project 11 105561887 105564507 - MGP_129S1SvImJ_P0032798 Gm11627 protein_coding protein_coding MGP_129S1SvImJ_T0031849.1 MGP_129S1SvImJ_G0018988.1 mouse_genomes_project 11 97950501 97953625 + MGP_129S1SvImJ_P0031849 B130006D01Rik protein_coding protein_coding MGP_129S1SvImJ_T0006339.1 MGP_129S1SvImJ_G0005289.1 mouse_genomes_project 11 97915509 97917759 - Gm9796 lincRNA lincRNA MGP_129S1SvImJ_T0006340.1 MGP_129S1SvImJ_G0005289.1 mouse_genomes_project 11 97915513 97917759 - Gm9796 lincRNA lincRNA MGP_129S1SvImJ_T0006276.1 MGP_129S1SvImJ_G0005245.1 mouse_genomes_project 11 67229872 67238810 + lincRNA lincRNA MGP_129S1SvImJ_T0006277.1 MGP_129S1SvImJ_G0005245.1 mouse_genomes_project 11 67231113 67239313 + lincRNA lincRNA MGP_129S1SvImJ_T0030252.1 MGP_129S1SvImJ_G0018590.1 mouse_genomes_project 11 70763043 70778573 - MGP_129S1SvImJ_P0030252 Alox12 protein_coding protein_coding MGP_129S1SvImJ_T0030253.1 MGP_129S1SvImJ_G0018590.1 mouse_genomes_project 11 70772184 70778561 - MGP_129S1SvImJ_P0030253 Alox12 protein_coding protein_coding MGP_129S1SvImJ_T0102156.1 MGP_129S1SvImJ_G0039991.1 mouse_genomes_project 11 97026222 97026964 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0033051.1 MGP_129S1SvImJ_G0019299.1 mouse_genomes_project 11 109538053 109544991 - MGP_129S1SvImJ_P0033051 Ftsj3 protein_coding protein_coding MGP_129S1SvImJ_T0033052.1 MGP_129S1SvImJ_G0019299.1 mouse_genomes_project 11 109538810 109539610 - Ftsj3 protein_coding retained_intron MGP_129S1SvImJ_T0033053.1 MGP_129S1SvImJ_G0019299.1 mouse_genomes_project 11 109539920 109541466 - Ftsj3 protein_coding retained_intron MGP_129S1SvImJ_T0033054.1 MGP_129S1SvImJ_G0019299.1 mouse_genomes_project 11 109542287 109542907 - Ftsj3 protein_coding retained_intron MGP_129S1SvImJ_T0033055.1 MGP_129S1SvImJ_G0019299.1 mouse_genomes_project 11 109543203 109544708 - Ftsj3 protein_coding retained_intron MGP_129S1SvImJ_T0033056.1 MGP_129S1SvImJ_G0019299.1 mouse_genomes_project 11 109543774 109544716 - Ftsj3 protein_coding retained_intron MGP_129S1SvImJ_T0029585.1 MGP_129S1SvImJ_G0018444.1 mouse_genomes_project 11 61645364 61693329 - Slc5a10 protein_coding processed_transcript MGP_129S1SvImJ_T0029586.1 MGP_129S1SvImJ_G0018444.1 mouse_genomes_project 11 61645365 61692449 - MGP_129S1SvImJ_P0029586 Slc5a10 protein_coding protein_coding MGP_129S1SvImJ_T0029587.1 MGP_129S1SvImJ_G0018444.1 mouse_genomes_project 11 61645365 61693302 - MGP_129S1SvImJ_P0029587 Slc5a10 protein_coding protein_coding MGP_129S1SvImJ_T0029588.1 MGP_129S1SvImJ_G0018444.1 mouse_genomes_project 11 61645375 61692500 - MGP_129S1SvImJ_P0029588 Slc5a10 protein_coding protein_coding MGP_129S1SvImJ_T0031562.1 MGP_129S1SvImJ_G0018916.1 mouse_genomes_project 11 89534831 89535941 - MGP_129S1SvImJ_P0031562 Olfr463 protein_coding protein_coding MGP_129S1SvImJ_T0032295.1 MGP_129S1SvImJ_G0019125.1 mouse_genomes_project 11 102578223 102579330 + MGP_129S1SvImJ_P0032295 Gm11559 protein_coding protein_coding MGP_129S1SvImJ_T0032298.1 MGP_129S1SvImJ_G0019128.1 mouse_genomes_project 11 102625534 102637833 + MGP_129S1SvImJ_P0032298 protein_coding protein_coding MGP_129S1SvImJ_T0027730.1 MGP_129S1SvImJ_G0017963.1 mouse_genomes_project 11 594275 759334 - MGP_129S1SvImJ_P0027730 Osbp2 protein_coding protein_coding MGP_129S1SvImJ_T0027731.1 MGP_129S1SvImJ_G0017963.1 mouse_genomes_project 11 594277 759184 - MGP_129S1SvImJ_P0027731 Osbp2 protein_coding protein_coding MGP_129S1SvImJ_T0027732.1 MGP_129S1SvImJ_G0017963.1 mouse_genomes_project 11 594462 614382 - MGP_129S1SvImJ_P0027732 Osbp2 protein_coding protein_coding MGP_129S1SvImJ_T0027733.1 MGP_129S1SvImJ_G0017963.1 mouse_genomes_project 11 610018 666366 - MGP_129S1SvImJ_P0027733 Osbp2 protein_coding protein_coding MGP_129S1SvImJ_T0027734.1 MGP_129S1SvImJ_G0017963.1 mouse_genomes_project 11 610078 667303 - MGP_129S1SvImJ_P0027734 Osbp2 protein_coding protein_coding MGP_129S1SvImJ_T0027735.1 MGP_129S1SvImJ_G0017963.1 mouse_genomes_project 11 616567 759334 - Osbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0034086.1 MGP_129S1SvImJ_G0019505.1 mouse_genomes_project 11 124953793 124958246 + MGP_129S1SvImJ_P0034086 Mrpl12 protein_coding protein_coding MGP_129S1SvImJ_T0034087.1 MGP_129S1SvImJ_G0019505.1 mouse_genomes_project 11 124954207 124957638 + Mrpl12 protein_coding processed_transcript MGP_129S1SvImJ_T0100542.1 MGP_129S1SvImJ_G0038609.1 mouse_genomes_project 11 120818881 120818957 + Snord1c snoRNA snoRNA MGP_129S1SvImJ_T0027994.1 MGP_129S1SvImJ_G0018023.1 mouse_genomes_project 11 3547724 3568674 - MGP_129S1SvImJ_P0027994 H2afv protein_coding protein_coding MGP_129S1SvImJ_T0027995.1 MGP_129S1SvImJ_G0018023.1 mouse_genomes_project 11 3548633 3568583 - MGP_129S1SvImJ_P0027995 H2afv protein_coding protein_coding MGP_129S1SvImJ_T0028336.1 MGP_129S1SvImJ_G0018103.1 mouse_genomes_project 11 27125193 27155996 + Pnpt1 protein_coding processed_transcript MGP_129S1SvImJ_T0028337.1 MGP_129S1SvImJ_G0018103.1 mouse_genomes_project 11 27125197 27130013 + Pnpt1 protein_coding processed_transcript MGP_129S1SvImJ_T0028338.1 MGP_129S1SvImJ_G0018103.1 mouse_genomes_project 11 27125197 27156144 + MGP_129S1SvImJ_P0028338 Pnpt1 protein_coding protein_coding MGP_129S1SvImJ_T0028339.1 MGP_129S1SvImJ_G0018103.1 mouse_genomes_project 11 27132648 27139932 + Pnpt1 protein_coding processed_transcript MGP_129S1SvImJ_T0012629.1 MGP_129S1SvImJ_G0010718.1 mouse_genomes_project 11 55096311 55096781 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028540.1 MGP_129S1SvImJ_G0018153.1 mouse_genomes_project 11 33163115 33187690 - MGP_129S1SvImJ_P0028540 Spdl1 protein_coding protein_coding MGP_129S1SvImJ_T0028541.1 MGP_129S1SvImJ_G0018153.1 mouse_genomes_project 11 33175949 33177860 - Spdl1 protein_coding retained_intron MGP_129S1SvImJ_T0028542.1 MGP_129S1SvImJ_G0018153.1 mouse_genomes_project 11 33184175 33187641 - Spdl1 protein_coding retained_intron MGP_129S1SvImJ_T0101613.1 MGP_129S1SvImJ_G0039658.1 mouse_genomes_project 11 19132561 19133254 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0012588.1 MGP_129S1SvImJ_G0010677.1 mouse_genomes_project 11 40458772 40459104 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012730.1 MGP_129S1SvImJ_G0010819.1 mouse_genomes_project 11 94738903 94739484 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029827.1 MGP_129S1SvImJ_G0018501.1 mouse_genomes_project 11 68850660 68901731 + MGP_129S1SvImJ_P0029827 Pik3r6 protein_coding protein_coding MGP_129S1SvImJ_T0029828.1 MGP_129S1SvImJ_G0018501.1 mouse_genomes_project 11 68850660 68901731 + MGP_129S1SvImJ_P0029828 Pik3r6 protein_coding protein_coding MGP_129S1SvImJ_T0029829.1 MGP_129S1SvImJ_G0018501.1 mouse_genomes_project 11 68850732 68901731 + Pik3r6 protein_coding processed_transcript MGP_129S1SvImJ_T0029830.1 MGP_129S1SvImJ_G0018501.1 mouse_genomes_project 11 68885242 68893350 + Pik3r6 protein_coding processed_transcript MGP_129S1SvImJ_T0029831.1 MGP_129S1SvImJ_G0018501.1 mouse_genomes_project 11 68901096 68901729 + Pik3r6 protein_coding processed_transcript MGP_129S1SvImJ_T0031829.1 MGP_129S1SvImJ_G0018982.1 mouse_genomes_project 11 97577323 97580457 + MGP_129S1SvImJ_P0031829 Slc35b1 protein_coding protein_coding MGP_129S1SvImJ_T0031830.1 MGP_129S1SvImJ_G0018982.1 mouse_genomes_project 11 97577457 97584343 + MGP_129S1SvImJ_P0031830 Slc35b1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031831.1 MGP_129S1SvImJ_G0018982.1 mouse_genomes_project 11 97577468 97584344 + MGP_129S1SvImJ_P0031831 Slc35b1 protein_coding protein_coding MGP_129S1SvImJ_T0031832.1 MGP_129S1SvImJ_G0018982.1 mouse_genomes_project 11 97577472 97578878 + Slc35b1 protein_coding retained_intron MGP_129S1SvImJ_T0031833.1 MGP_129S1SvImJ_G0018982.1 mouse_genomes_project 11 97582551 97583220 + Slc35b1 protein_coding retained_intron MGP_129S1SvImJ_T0003308.1 MGP_129S1SvImJ_G0003056.1 mouse_genomes_project 11 102051542 102052095 + Gm11940 antisense antisense MGP_129S1SvImJ_T0012501.1 MGP_129S1SvImJ_G0010590.1 mouse_genomes_project 11 11817273 11817676 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006331.1 MGP_129S1SvImJ_G0005283.1 mouse_genomes_project 11 91083712 91090961 + Gm2018 lincRNA lincRNA MGP_129S1SvImJ_T0003335.1 MGP_129S1SvImJ_G0003079.1 mouse_genomes_project 11 109320338 109321040 - Gm11646 antisense antisense MGP_129S1SvImJ_T0029269.1 MGP_129S1SvImJ_G0018359.1 mouse_genomes_project 11 58230101 58231394 - MGP_129S1SvImJ_P0029269 protein_coding protein_coding MGP_129S1SvImJ_T0029270.1 MGP_129S1SvImJ_G0018359.1 mouse_genomes_project 11 58230101 58231402 - MGP_129S1SvImJ_P0029270 protein_coding protein_coding MGP_129S1SvImJ_T0032301.1 MGP_129S1SvImJ_G0019131.1 mouse_genomes_project 11 102713528 102714557 - MGP_129S1SvImJ_P0032301 Krtap29-1 protein_coding protein_coding MGP_129S1SvImJ_T0029666.1 MGP_129S1SvImJ_G0018458.1 mouse_genomes_project 11 62653288 62702664 - MGP_129S1SvImJ_P0029666 Lrrc75a protein_coding protein_coding MGP_129S1SvImJ_T0029667.1 MGP_129S1SvImJ_G0018458.1 mouse_genomes_project 11 62654227 62702181 - Lrrc75a protein_coding processed_transcript MGP_129S1SvImJ_T0029668.1 MGP_129S1SvImJ_G0018458.1 mouse_genomes_project 11 62654431 62702190 - Lrrc75a protein_coding processed_transcript MGP_129S1SvImJ_T0099289.1 MGP_129S1SvImJ_G0037356.1 mouse_genomes_project 11 105530212 105530316 - Gm25337 snRNA snRNA MGP_129S1SvImJ_T0028756.1 MGP_129S1SvImJ_G0018218.1 mouse_genomes_project 11 48167924 48170022 - MGP_129S1SvImJ_P0028756 protein_coding protein_coding MGP_129S1SvImJ_T0031073.1 MGP_129S1SvImJ_G0018788.1 mouse_genomes_project 11 79588794 79732641 - MGP_129S1SvImJ_P0031073 Nlk protein_coding protein_coding MGP_129S1SvImJ_T0031074.1 MGP_129S1SvImJ_G0018788.1 mouse_genomes_project 11 79643650 79731762 - Nlk protein_coding retained_intron MGP_129S1SvImJ_T0009739.1 MGP_129S1SvImJ_G0007855.1 mouse_genomes_project 11 87289200 87289287 - Mir5110 miRNA miRNA MGP_129S1SvImJ_T0098814.1 MGP_129S1SvImJ_G0036897.1 mouse_genomes_project 11 99957652 99959936 - Gm11611 sense_intronic sense_intronic MGP_129S1SvImJ_T0034153.1 MGP_129S1SvImJ_G0019520.1 mouse_genomes_project 11 125134724 125141549 - MGP_129S1SvImJ_P0034153 Notum protein_coding protein_coding MGP_129S1SvImJ_T0034154.1 MGP_129S1SvImJ_G0019520.1 mouse_genomes_project 11 125134724 125141772 - MGP_129S1SvImJ_P0034154 Notum protein_coding protein_coding MGP_129S1SvImJ_T0034155.1 MGP_129S1SvImJ_G0019520.1 mouse_genomes_project 11 125134781 125138987 - Notum protein_coding retained_intron MGP_129S1SvImJ_T0034156.1 MGP_129S1SvImJ_G0019520.1 mouse_genomes_project 11 125138505 125142118 - MGP_129S1SvImJ_P0034156 Notum protein_coding protein_coding MGP_129S1SvImJ_T0009679.1 MGP_129S1SvImJ_G0007795.1 mouse_genomes_project 11 36551095 36551174 - Gm25693 miRNA miRNA MGP_129S1SvImJ_T0029501.1 MGP_129S1SvImJ_G0018430.1 mouse_genomes_project 11 60860035 60884441 + MGP_129S1SvImJ_P0029501 Map2k3 protein_coding protein_coding MGP_129S1SvImJ_T0029502.1 MGP_129S1SvImJ_G0018430.1 mouse_genomes_project 11 60860056 60877596 + Map2k3 protein_coding retained_intron MGP_129S1SvImJ_T0029503.1 MGP_129S1SvImJ_G0018430.1 mouse_genomes_project 11 60860056 60872051 + Map2k3 protein_coding retained_intron MGP_129S1SvImJ_T0029504.1 MGP_129S1SvImJ_G0018430.1 mouse_genomes_project 11 60860068 60884424 + MGP_129S1SvImJ_P0029504 Map2k3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029505.1 MGP_129S1SvImJ_G0018430.1 mouse_genomes_project 11 60871814 60876776 + Map2k3 protein_coding processed_transcript MGP_129S1SvImJ_T0029506.1 MGP_129S1SvImJ_G0018430.1 mouse_genomes_project 11 60882297 60883457 + Map2k3 protein_coding retained_intron MGP_129S1SvImJ_T0100519.1 MGP_129S1SvImJ_G0038586.1 mouse_genomes_project 11 78128599 78128687 - Gm24989 snoRNA snoRNA MGP_129S1SvImJ_T0099236.1 MGP_129S1SvImJ_G0037303.1 mouse_genomes_project 11 38467026 38467171 + Gm24192 snRNA snRNA MGP_129S1SvImJ_T0028597.1 MGP_129S1SvImJ_G0018167.1 mouse_genomes_project 11 40997459 41017249 - MGP_129S1SvImJ_P0028597 Gabra6 protein_coding protein_coding MGP_129S1SvImJ_T0028598.1 MGP_129S1SvImJ_G0018167.1 mouse_genomes_project 11 40997460 41017251 - MGP_129S1SvImJ_P0028598 Gabra6 protein_coding protein_coding MGP_129S1SvImJ_T0028599.1 MGP_129S1SvImJ_G0018167.1 mouse_genomes_project 11 40998282 41017272 - MGP_129S1SvImJ_P0028599 Gabra6 protein_coding protein_coding MGP_129S1SvImJ_T0003270.1 MGP_129S1SvImJ_G0003028.1 mouse_genomes_project 11 87745546 87755325 + Brip1os antisense antisense MGP_129S1SvImJ_T0003271.1 MGP_129S1SvImJ_G0003028.1 mouse_genomes_project 11 87745559 87854787 + Brip1os antisense antisense MGP_129S1SvImJ_T0099232.1 MGP_129S1SvImJ_G0037299.1 mouse_genomes_project 11 27329264 27329390 + Gm23109 snRNA snRNA MGP_129S1SvImJ_T0028500.1 MGP_129S1SvImJ_G0018140.1 mouse_genomes_project 11 31394070 31425858 - MGP_129S1SvImJ_P0028500 Fgf18 protein_coding protein_coding MGP_129S1SvImJ_T0012804.1 MGP_129S1SvImJ_G0010893.1 mouse_genomes_project 11 126516235 126516663 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006261.1 MGP_129S1SvImJ_G0005232.1 mouse_genomes_project 11 59753065 59764076 + Gm12714 lincRNA lincRNA MGP_129S1SvImJ_T0012487.1 MGP_129S1SvImJ_G0010576.1 mouse_genomes_project 11 3877473 3878051 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003229.1 MGP_129S1SvImJ_G0002995.1 mouse_genomes_project 11 67485007 67488554 - 9430073C21Rik antisense antisense MGP_129S1SvImJ_T0098459.1 MGP_129S1SvImJ_G0036544.1 mouse_genomes_project 11 111283308 111283420 + Gm27595 rRNA rRNA MGP_129S1SvImJ_T0031604.1 MGP_129S1SvImJ_G0018926.1 mouse_genomes_project 11 90677366 90711789 - MGP_129S1SvImJ_P0031604 Scpep1 protein_coding protein_coding MGP_129S1SvImJ_T0000876.1 MGP_129S1SvImJ_G0000809.1 mouse_genomes_project 11 109205780 109207328 + TEC TEC MGP_129S1SvImJ_T0011823.1 MGP_129S1SvImJ_G0009935.1 mouse_genomes_project 11 120313926 120317700 + MGP_129S1SvImJ_P0011823 Cdk3-ps polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0011824.1 MGP_129S1SvImJ_G0009935.1 mouse_genomes_project 11 120314409 120315108 + Cdk3-ps polymorphic_pseudogene processed_transcript MGP_129S1SvImJ_T0011825.1 MGP_129S1SvImJ_G0009935.1 mouse_genomes_project 11 120314463 120318211 + Cdk3-ps polymorphic_pseudogene processed_transcript MGP_129S1SvImJ_T0098812.1 MGP_129S1SvImJ_G0036896.1 mouse_genomes_project 11 89332717 89336609 + 1110028F11Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0098813.1 MGP_129S1SvImJ_G0036896.1 mouse_genomes_project 11 89333444 89336267 + 1110028F11Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0033370.1 MGP_129S1SvImJ_G0019369.1 mouse_genomes_project 11 119021990 119025943 - MGP_129S1SvImJ_P0033370 protein_coding protein_coding MGP_129S1SvImJ_T0028438.1 MGP_129S1SvImJ_G0018124.1 mouse_genomes_project 11 30133870 30148501 + MGP_129S1SvImJ_P0028438 4930524B15Rik protein_coding protein_coding MGP_129S1SvImJ_T0099246.1 MGP_129S1SvImJ_G0037313.1 mouse_genomes_project 11 61926699 61926806 - Gm23721 snRNA snRNA MGP_129S1SvImJ_T0017284.1 MGP_129S1SvImJ_G0015206.1 mouse_genomes_project 11 100886351 100896063 - 1700003D09Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0006367.1 MGP_129S1SvImJ_G0005310.1 mouse_genomes_project 11 116548768 116554975 - Gm11681 lincRNA lincRNA MGP_129S1SvImJ_T0027920.1 MGP_129S1SvImJ_G0018005.1 mouse_genomes_project 11 2780483 2816535 - MGP_129S1SvImJ_P0027920 Urgcp protein_coding protein_coding MGP_129S1SvImJ_T0027921.1 MGP_129S1SvImJ_G0018005.1 mouse_genomes_project 11 2787838 2816571 - MGP_129S1SvImJ_P0027921 Urgcp protein_coding protein_coding MGP_129S1SvImJ_T0031079.1 MGP_129S1SvImJ_G0018791.1 mouse_genomes_project 11 79978935 80021467 + MGP_129S1SvImJ_P0031079 Nos2 protein_coding protein_coding MGP_129S1SvImJ_T0031080.1 MGP_129S1SvImJ_G0018791.1 mouse_genomes_project 11 79983320 80021021 + MGP_129S1SvImJ_P0031080 Nos2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0012502.1 MGP_129S1SvImJ_G0010591.1 mouse_genomes_project 11 11930088 11930637 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0027997.1 MGP_129S1SvImJ_G0018025.1 mouse_genomes_project 11 3645798 3660188 - MGP_129S1SvImJ_P0027997 Myo1g protein_coding protein_coding MGP_129S1SvImJ_T0027998.1 MGP_129S1SvImJ_G0018025.1 mouse_genomes_project 11 3645924 3660127 - MGP_129S1SvImJ_P0027998 Myo1g protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027999.1 MGP_129S1SvImJ_G0018025.1 mouse_genomes_project 11 3647119 3647936 - Myo1g protein_coding retained_intron MGP_129S1SvImJ_T0028000.1 MGP_129S1SvImJ_G0018025.1 mouse_genomes_project 11 3652214 3660188 - Myo1g protein_coding retained_intron MGP_129S1SvImJ_T0028001.1 MGP_129S1SvImJ_G0018025.1 mouse_genomes_project 11 3653753 3654751 - Myo1g protein_coding retained_intron MGP_129S1SvImJ_T0028002.1 MGP_129S1SvImJ_G0018025.1 mouse_genomes_project 11 3657244 3660195 - MGP_129S1SvImJ_P0028002 Myo1g protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028003.1 MGP_129S1SvImJ_G0018025.1 mouse_genomes_project 11 3658296 3658754 - MGP_129S1SvImJ_P0028003 Myo1g protein_coding protein_coding MGP_129S1SvImJ_T0012735.1 MGP_129S1SvImJ_G0010824.1 mouse_genomes_project 11 97964424 97964732 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032822.1 MGP_129S1SvImJ_G0019245.1 mouse_genomes_project 11 105866937 105869129 + MGP_129S1SvImJ_P0032822 Higd1b protein_coding protein_coding MGP_129S1SvImJ_T0032823.1 MGP_129S1SvImJ_G0019245.1 mouse_genomes_project 11 105867384 105869129 + MGP_129S1SvImJ_P0032823 Higd1b protein_coding protein_coding MGP_129S1SvImJ_T0032824.1 MGP_129S1SvImJ_G0019245.1 mouse_genomes_project 11 105867534 105869129 + MGP_129S1SvImJ_P0032824 Higd1b protein_coding protein_coding MGP_129S1SvImJ_T0000864.1 MGP_129S1SvImJ_G0000797.1 mouse_genomes_project 11 13411923 13412559 + TEC TEC MGP_129S1SvImJ_T0006281.1 MGP_129S1SvImJ_G0005248.1 mouse_genomes_project 11 71198235 71199951 - Gm12319 lincRNA lincRNA MGP_129S1SvImJ_T0012646.1 MGP_129S1SvImJ_G0010735.1 mouse_genomes_project 11 60326229 60326671 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033099.1 MGP_129S1SvImJ_G0019311.1 mouse_genomes_project 11 110084550 110102978 + MGP_129S1SvImJ_P0033099 protein_coding protein_coding MGP_129S1SvImJ_T0033100.1 MGP_129S1SvImJ_G0019311.1 mouse_genomes_project 11 110084564 110101733 + MGP_129S1SvImJ_P0033100 protein_coding protein_coding MGP_129S1SvImJ_T0033101.1 MGP_129S1SvImJ_G0019311.1 mouse_genomes_project 11 110084564 110101310 + MGP_129S1SvImJ_P0033101 protein_coding protein_coding MGP_129S1SvImJ_T0033102.1 MGP_129S1SvImJ_G0019311.1 mouse_genomes_project 11 110084564 110101310 + MGP_129S1SvImJ_P0033102 protein_coding protein_coding MGP_129S1SvImJ_T0033103.1 MGP_129S1SvImJ_G0019311.1 mouse_genomes_project 11 110084589 110102903 + MGP_129S1SvImJ_P0033103 protein_coding protein_coding MGP_129S1SvImJ_T0033104.1 MGP_129S1SvImJ_G0019311.1 mouse_genomes_project 11 110084592 110101949 + MGP_129S1SvImJ_P0033104 protein_coding protein_coding MGP_129S1SvImJ_T0033105.1 MGP_129S1SvImJ_G0019311.1 mouse_genomes_project 11 110084592 110102901 + MGP_129S1SvImJ_P0033105 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033106.1 MGP_129S1SvImJ_G0019311.1 mouse_genomes_project 11 110088278 110102904 + MGP_129S1SvImJ_P0033106 protein_coding protein_coding MGP_129S1SvImJ_T0003381.1 MGP_129S1SvImJ_G0003116.1 mouse_genomes_project 11 124958586 124961576 - Gm11788 antisense antisense MGP_129S1SvImJ_T0028481.1 MGP_129S1SvImJ_G0018131.1 mouse_genomes_project 11 30481111 30482814 + MGP_129S1SvImJ_P0028481 Hba-x protein_coding protein_coding MGP_129S1SvImJ_T0028482.1 MGP_129S1SvImJ_G0018131.1 mouse_genomes_project 11 30481604 30482814 + MGP_129S1SvImJ_P0028482 Hba-x protein_coding protein_coding MGP_129S1SvImJ_T0030888.1 MGP_129S1SvImJ_G0018749.1 mouse_genomes_project 11 78417014 78422285 - MGP_129S1SvImJ_P0030888 Trp53i13 protein_coding protein_coding MGP_129S1SvImJ_T0030889.1 MGP_129S1SvImJ_G0018749.1 mouse_genomes_project 11 78417526 78421678 - Trp53i13 protein_coding processed_transcript MGP_129S1SvImJ_T0030890.1 MGP_129S1SvImJ_G0018749.1 mouse_genomes_project 11 78417885 78421950 - Trp53i13 protein_coding processed_transcript MGP_129S1SvImJ_T0030891.1 MGP_129S1SvImJ_G0018749.1 mouse_genomes_project 11 78418016 78425402 - MGP_129S1SvImJ_P0030891 Trp53i13 protein_coding protein_coding MGP_129S1SvImJ_T0030892.1 MGP_129S1SvImJ_G0018749.1 mouse_genomes_project 11 78421658 78425651 - Trp53i13 protein_coding processed_transcript MGP_129S1SvImJ_T0031345.1 MGP_129S1SvImJ_G0018869.1 mouse_genomes_project 11 85838354 85935139 - MGP_129S1SvImJ_P0031345 Aatf protein_coding protein_coding MGP_129S1SvImJ_T0031346.1 MGP_129S1SvImJ_G0018869.1 mouse_genomes_project 11 85838382 85911876 - Aatf protein_coding processed_transcript MGP_129S1SvImJ_T0031347.1 MGP_129S1SvImJ_G0018869.1 mouse_genomes_project 11 85861850 85868923 - Aatf protein_coding retained_intron MGP_129S1SvImJ_T0031348.1 MGP_129S1SvImJ_G0018869.1 mouse_genomes_project 11 85887518 85935139 - Aatf protein_coding retained_intron MGP_129S1SvImJ_T0031578.1 MGP_129S1SvImJ_G0018921.1 mouse_genomes_project 11 89781871 89783920 + Cuedc1 protein_coding processed_transcript MGP_129S1SvImJ_T0031579.1 MGP_129S1SvImJ_G0018921.1 mouse_genomes_project 11 89782957 89886499 + MGP_129S1SvImJ_P0031579 Cuedc1 protein_coding protein_coding MGP_129S1SvImJ_T0031580.1 MGP_129S1SvImJ_G0018921.1 mouse_genomes_project 11 89783101 89874784 + Cuedc1 protein_coding retained_intron MGP_129S1SvImJ_T0031581.1 MGP_129S1SvImJ_G0018921.1 mouse_genomes_project 11 89850719 89886499 + MGP_129S1SvImJ_P0031581 Cuedc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031582.1 MGP_129S1SvImJ_G0018921.1 mouse_genomes_project 11 89871728 89872706 + Cuedc1 protein_coding retained_intron MGP_129S1SvImJ_T0031583.1 MGP_129S1SvImJ_G0018921.1 mouse_genomes_project 11 89876820 89879640 + Cuedc1 protein_coding processed_transcript MGP_129S1SvImJ_T0031584.1 MGP_129S1SvImJ_G0018921.1 mouse_genomes_project 11 89878644 89883584 + Cuedc1 protein_coding retained_intron MGP_129S1SvImJ_T0028493.1 MGP_129S1SvImJ_G0018138.1 mouse_genomes_project 11 30886090 30998177 + MGP_129S1SvImJ_P0028493 Fbxw11 protein_coding protein_coding MGP_129S1SvImJ_T0028494.1 MGP_129S1SvImJ_G0018138.1 mouse_genomes_project 11 30886150 30897106 + Fbxw11 protein_coding processed_transcript MGP_129S1SvImJ_T0028495.1 MGP_129S1SvImJ_G0018138.1 mouse_genomes_project 11 30886232 30998397 + MGP_129S1SvImJ_P0028495 Fbxw11 protein_coding protein_coding MGP_129S1SvImJ_T0028496.1 MGP_129S1SvImJ_G0018138.1 mouse_genomes_project 11 30886241 30998424 + MGP_129S1SvImJ_P0028496 Fbxw11 protein_coding protein_coding MGP_129S1SvImJ_T0028497.1 MGP_129S1SvImJ_G0018138.1 mouse_genomes_project 11 30886270 30972582 + MGP_129S1SvImJ_P0028497 Fbxw11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030024.1 MGP_129S1SvImJ_G0018545.1 mouse_genomes_project 11 70121118 70123059 - MGP_129S1SvImJ_P0030024 Cd68 protein_coding protein_coding MGP_129S1SvImJ_T0030025.1 MGP_129S1SvImJ_G0018545.1 mouse_genomes_project 11 70121211 70122968 - Cd68 protein_coding processed_transcript MGP_129S1SvImJ_T0030026.1 MGP_129S1SvImJ_G0018545.1 mouse_genomes_project 11 70121276 70122968 - MGP_129S1SvImJ_P0030026 Cd68 protein_coding protein_coding MGP_129S1SvImJ_T0032028.1 MGP_129S1SvImJ_G0019034.1 mouse_genomes_project 11 100076570 100078884 - MGP_129S1SvImJ_P0032028 E130012A19Rik protein_coding protein_coding MGP_129S1SvImJ_T0031606.1 MGP_129S1SvImJ_G0018928.1 mouse_genomes_project 11 90729251 90755156 + MGP_129S1SvImJ_P0031606 Coil protein_coding protein_coding MGP_129S1SvImJ_T0031607.1 MGP_129S1SvImJ_G0018928.1 mouse_genomes_project 11 90735817 90755156 + MGP_129S1SvImJ_P0031607 Coil protein_coding protein_coding MGP_129S1SvImJ_T0031608.1 MGP_129S1SvImJ_G0018928.1 mouse_genomes_project 11 90750731 90754497 + Coil protein_coding retained_intron MGP_129S1SvImJ_T0029713.1 MGP_129S1SvImJ_G0018471.1 mouse_genomes_project 11 64601335 64602833 - MGP_129S1SvImJ_P0029713 F930015N05Rik protein_coding protein_coding MGP_129S1SvImJ_T0012720.1 MGP_129S1SvImJ_G0010809.1 mouse_genomes_project 11 89083177 89084557 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031068.1 MGP_129S1SvImJ_G0018787.1 mouse_genomes_project 11 79556227 79561606 + MGP_129S1SvImJ_P0031068 Ift20 protein_coding protein_coding MGP_129S1SvImJ_T0031069.1 MGP_129S1SvImJ_G0018787.1 mouse_genomes_project 11 79556294 79561243 + MGP_129S1SvImJ_P0031069 Ift20 protein_coding protein_coding MGP_129S1SvImJ_T0031070.1 MGP_129S1SvImJ_G0018787.1 mouse_genomes_project 11 79556309 79561350 + MGP_129S1SvImJ_P0031070 Ift20 protein_coding protein_coding MGP_129S1SvImJ_T0031071.1 MGP_129S1SvImJ_G0018787.1 mouse_genomes_project 11 79556311 79561350 + Ift20 protein_coding retained_intron MGP_129S1SvImJ_T0031072.1 MGP_129S1SvImJ_G0018787.1 mouse_genomes_project 11 79556339 79561350 + Ift20 protein_coding retained_intron MGP_129S1SvImJ_T0012787.1 MGP_129S1SvImJ_G0010876.1 mouse_genomes_project 11 118865866 118866321 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098731.1 MGP_129S1SvImJ_G0036816.1 mouse_genomes_project 11 120253721 120253847 - Gm26413 scaRNA scaRNA MGP_129S1SvImJ_T0029752.1 MGP_129S1SvImJ_G0018481.1 mouse_genomes_project 11 67184271 67202055 + MGP_129S1SvImJ_P0029752 Pirt protein_coding protein_coding MGP_129S1SvImJ_T0028632.1 MGP_129S1SvImJ_G0018177.1 mouse_genomes_project 11 42464444 42490473 + MGP_129S1SvImJ_P0028632 Pwwp2a protein_coding protein_coding MGP_129S1SvImJ_T0028633.1 MGP_129S1SvImJ_G0018177.1 mouse_genomes_project 11 42464504 42503646 + MGP_129S1SvImJ_P0028633 Pwwp2a protein_coding protein_coding MGP_129S1SvImJ_T0028634.1 MGP_129S1SvImJ_G0018177.1 mouse_genomes_project 11 42464994 42466519 + Pwwp2a protein_coding processed_transcript MGP_129S1SvImJ_T0028635.1 MGP_129S1SvImJ_G0018177.1 mouse_genomes_project 11 42466609 42490473 + MGP_129S1SvImJ_P0028635 Pwwp2a protein_coding protein_coding MGP_129S1SvImJ_T0028636.1 MGP_129S1SvImJ_G0018177.1 mouse_genomes_project 11 42488524 42504726 + Pwwp2a protein_coding processed_transcript MGP_129S1SvImJ_T0028637.1 MGP_129S1SvImJ_G0018177.1 mouse_genomes_project 11 42500889 42504067 + Pwwp2a protein_coding processed_transcript MGP_129S1SvImJ_T0003390.1 MGP_129S1SvImJ_G0003121.1 mouse_genomes_project 11 125338154 125341378 + Gm11773 antisense antisense MGP_129S1SvImJ_T0006337.1 MGP_129S1SvImJ_G0005287.1 mouse_genomes_project 11 97833049 97840226 + Gm11528 lincRNA lincRNA MGP_129S1SvImJ_T0030592.1 MGP_129S1SvImJ_G0018673.1 mouse_genomes_project 11 74477636 74620390 + MGP_129S1SvImJ_P0030592 protein_coding protein_coding MGP_129S1SvImJ_T0030593.1 MGP_129S1SvImJ_G0018673.1 mouse_genomes_project 11 74477654 74619921 + MGP_129S1SvImJ_P0030593 protein_coding protein_coding MGP_129S1SvImJ_T0030600.1 MGP_129S1SvImJ_G0018673.1 mouse_genomes_project 11 74619451 74620390 + MGP_129S1SvImJ_P0030600 protein_coding protein_coding MGP_129S1SvImJ_T0099239.1 MGP_129S1SvImJ_G0037306.1 mouse_genomes_project 11 51247453 51247561 + Gm26061 snRNA snRNA MGP_129S1SvImJ_T0033049.1 MGP_129S1SvImJ_G0019298.1 mouse_genomes_project 11 109500299 109538051 + MGP_129S1SvImJ_P0033049 Ddx42 protein_coding protein_coding MGP_129S1SvImJ_T0033050.1 MGP_129S1SvImJ_G0019298.1 mouse_genomes_project 11 109520344 109527732 + Ddx42 protein_coding processed_transcript MGP_129S1SvImJ_T0012797.1 MGP_129S1SvImJ_G0010886.1 mouse_genomes_project 11 122522428 122522896 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011311.1 MGP_129S1SvImJ_G0009427.1 mouse_genomes_project 11 532551 532728 - Gm27624 misc_RNA misc_RNA MGP_129S1SvImJ_T0009748.1 MGP_129S1SvImJ_G0007864.1 mouse_genomes_project 11 98630325 98630435 + Mir10a miRNA miRNA MGP_129S1SvImJ_T0099273.1 MGP_129S1SvImJ_G0037340.1 mouse_genomes_project 11 89325883 89325983 - Gm25968 snRNA snRNA MGP_129S1SvImJ_T0100476.1 MGP_129S1SvImJ_G0038543.1 mouse_genomes_project 11 3768579 3768712 - Gm24313 snoRNA snoRNA MGP_129S1SvImJ_T0033652.1 MGP_129S1SvImJ_G0019421.1 mouse_genomes_project 11 120343067 120372111 - Srp68 protein_coding processed_transcript MGP_129S1SvImJ_T0033653.1 MGP_129S1SvImJ_G0019421.1 mouse_genomes_project 11 120343067 120372111 - MGP_129S1SvImJ_P0033653 Srp68 protein_coding protein_coding MGP_129S1SvImJ_T0033654.1 MGP_129S1SvImJ_G0019421.1 mouse_genomes_project 11 120343067 120372029 - MGP_129S1SvImJ_P0033654 Srp68 protein_coding protein_coding MGP_129S1SvImJ_T0033655.1 MGP_129S1SvImJ_G0019421.1 mouse_genomes_project 11 120346697 120359225 - Srp68 protein_coding processed_transcript MGP_129S1SvImJ_T0029798.1 MGP_129S1SvImJ_G0018494.1 mouse_genomes_project 11 68094085 68109122 + MGP_129S1SvImJ_P0029798 Gsg1l2 protein_coding protein_coding MGP_129S1SvImJ_T0029799.1 MGP_129S1SvImJ_G0018494.1 mouse_genomes_project 11 68100414 68104560 + MGP_129S1SvImJ_P0029799 Gsg1l2 protein_coding protein_coding MGP_129S1SvImJ_T0032307.1 MGP_129S1SvImJ_G0019137.1 mouse_genomes_project 11 102792193 102796824 - MGP_129S1SvImJ_P0032307 Krt31 protein_coding protein_coding MGP_129S1SvImJ_T0003288.1 MGP_129S1SvImJ_G0003041.1 mouse_genomes_project 11 97918721 97933964 - Zfp652os antisense antisense MGP_129S1SvImJ_T0029362.1 MGP_129S1SvImJ_G0018400.1 mouse_genomes_project 11 59328464 59347601 - MGP_129S1SvImJ_P0029362 Zkscan17 protein_coding protein_coding MGP_129S1SvImJ_T0029363.1 MGP_129S1SvImJ_G0018400.1 mouse_genomes_project 11 59340971 59347657 - Zkscan17 protein_coding processed_transcript MGP_129S1SvImJ_T0029364.1 MGP_129S1SvImJ_G0018400.1 mouse_genomes_project 11 59345600 59368110 - Zkscan17 protein_coding processed_transcript MGP_129S1SvImJ_T0029365.1 MGP_129S1SvImJ_G0018400.1 mouse_genomes_project 11 59345606 59347657 - Zkscan17 protein_coding processed_transcript MGP_129S1SvImJ_T0029366.1 MGP_129S1SvImJ_G0018400.1 mouse_genomes_project 11 59366930 59368230 - Zkscan17 protein_coding processed_transcript MGP_129S1SvImJ_T0028838.1 MGP_129S1SvImJ_G0018242.1 mouse_genomes_project 11 49335623 49339528 + 3010026O09Rik protein_coding processed_transcript MGP_129S1SvImJ_T0028839.1 MGP_129S1SvImJ_G0018242.1 mouse_genomes_project 11 49336028 49364859 + MGP_129S1SvImJ_P0028839 3010026O09Rik protein_coding protein_coding MGP_129S1SvImJ_T0028840.1 MGP_129S1SvImJ_G0018242.1 mouse_genomes_project 11 49336086 49360928 + MGP_129S1SvImJ_P0028840 3010026O09Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0009766.1 MGP_129S1SvImJ_G0007882.1 mouse_genomes_project 11 106036728 106036802 - Mir6931 miRNA miRNA MGP_129S1SvImJ_T0031899.1 MGP_129S1SvImJ_G0019005.1 mouse_genomes_project 11 98615042 98617828 + Hoxb5 protein_coding retained_intron MGP_129S1SvImJ_T0031900.1 MGP_129S1SvImJ_G0019005.1 mouse_genomes_project 11 98615218 98617827 + MGP_129S1SvImJ_P0031900 Hoxb5 protein_coding protein_coding MGP_129S1SvImJ_T0030543.1 MGP_129S1SvImJ_G0018651.1 mouse_genomes_project 11 73761402 73807519 + MGP_129S1SvImJ_P0030543 Itgae protein_coding protein_coding MGP_129S1SvImJ_T0030544.1 MGP_129S1SvImJ_G0018651.1 mouse_genomes_project 11 73761402 73825042 + MGP_129S1SvImJ_P0030544 Itgae protein_coding protein_coding MGP_129S1SvImJ_T0028378.1 MGP_129S1SvImJ_G0018111.1 mouse_genomes_project 11 27715368 27773777 + MGP_129S1SvImJ_P0028378 Rtn4 protein_coding protein_coding MGP_129S1SvImJ_T0028379.1 MGP_129S1SvImJ_G0018111.1 mouse_genomes_project 11 27715368 27775192 + MGP_129S1SvImJ_P0028379 Rtn4 protein_coding protein_coding MGP_129S1SvImJ_T0028380.1 MGP_129S1SvImJ_G0018111.1 mouse_genomes_project 11 27715368 27773777 + MGP_129S1SvImJ_P0028380 Rtn4 protein_coding protein_coding MGP_129S1SvImJ_T0028381.1 MGP_129S1SvImJ_G0018111.1 mouse_genomes_project 11 27715369 27772972 + MGP_129S1SvImJ_P0028381 Rtn4 protein_coding protein_coding MGP_129S1SvImJ_T0028382.1 MGP_129S1SvImJ_G0018111.1 mouse_genomes_project 11 27716195 27773777 + MGP_129S1SvImJ_P0028382 Rtn4 protein_coding protein_coding MGP_129S1SvImJ_T0028383.1 MGP_129S1SvImJ_G0018111.1 mouse_genomes_project 11 27741179 27773777 + MGP_129S1SvImJ_P0028383 Rtn4 protein_coding protein_coding MGP_129S1SvImJ_T0028384.1 MGP_129S1SvImJ_G0018111.1 mouse_genomes_project 11 27756314 27773296 + Rtn4 protein_coding processed_transcript MGP_129S1SvImJ_T0028385.1 MGP_129S1SvImJ_G0018111.1 mouse_genomes_project 11 27756389 27773208 + Rtn4 protein_coding processed_transcript MGP_129S1SvImJ_T0028386.1 MGP_129S1SvImJ_G0018111.1 mouse_genomes_project 11 27760031 27773208 + Rtn4 protein_coding processed_transcript MGP_129S1SvImJ_T0028387.1 MGP_129S1SvImJ_G0018111.1 mouse_genomes_project 11 27770428 27773146 + Rtn4 protein_coding processed_transcript MGP_129S1SvImJ_T0003177.1 MGP_129S1SvImJ_G0002951.1 mouse_genomes_project 11 51285129 51286188 + Gm12204 antisense antisense MGP_129S1SvImJ_T0033168.1 MGP_129S1SvImJ_G0019323.1 mouse_genomes_project 11 111154082 111218928 - MGP_129S1SvImJ_P0033168 Cacng4 protein_coding protein_coding MGP_129S1SvImJ_T0033169.1 MGP_129S1SvImJ_G0019323.1 mouse_genomes_project 11 111156914 111163797 - Cacng4 protein_coding processed_transcript MGP_129S1SvImJ_T0031926.1 MGP_129S1SvImJ_G0019012.1 mouse_genomes_project 11 99136398 99154592 + MGP_129S1SvImJ_P0031926 Cbx1 protein_coding protein_coding MGP_129S1SvImJ_T0031927.1 MGP_129S1SvImJ_G0019012.1 mouse_genomes_project 11 99136408 99162758 + MGP_129S1SvImJ_P0031927 Cbx1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031928.1 MGP_129S1SvImJ_G0019012.1 mouse_genomes_project 11 99136430 99163249 + MGP_129S1SvImJ_P0031928 Cbx1 protein_coding protein_coding MGP_129S1SvImJ_T0031929.1 MGP_129S1SvImJ_G0019012.1 mouse_genomes_project 11 99136446 99152032 + Cbx1 protein_coding retained_intron MGP_129S1SvImJ_T0031930.1 MGP_129S1SvImJ_G0019012.1 mouse_genomes_project 11 99136520 99163149 + MGP_129S1SvImJ_P0031930 Cbx1 protein_coding protein_coding MGP_129S1SvImJ_T0099247.1 MGP_129S1SvImJ_G0037314.1 mouse_genomes_project 11 65831882 65831992 + Gm26128 snRNA snRNA MGP_129S1SvImJ_T0017270.1 MGP_129S1SvImJ_G0015198.1 mouse_genomes_project 11 99217564 99235474 - Gm11523 processed_transcript lincRNA MGP_129S1SvImJ_T0017271.1 MGP_129S1SvImJ_G0015198.1 mouse_genomes_project 11 99217857 99235480 - Gm11523 processed_transcript lincRNA MGP_129S1SvImJ_T0017272.1 MGP_129S1SvImJ_G0015198.1 mouse_genomes_project 11 99217986 99235460 - Gm11523 processed_transcript antisense MGP_129S1SvImJ_T0032095.1 MGP_129S1SvImJ_G0019050.1 mouse_genomes_project 11 100595116 100667899 - MGP_129S1SvImJ_P0032095 Fbxl20 protein_coding protein_coding MGP_129S1SvImJ_T0032096.1 MGP_129S1SvImJ_G0019050.1 mouse_genomes_project 11 100603550 100667893 - Fbxl20 protein_coding retained_intron MGP_129S1SvImJ_T0032097.1 MGP_129S1SvImJ_G0019050.1 mouse_genomes_project 11 100608822 100613556 - MGP_129S1SvImJ_P0032097 Fbxl20 protein_coding protein_coding MGP_129S1SvImJ_T0032098.1 MGP_129S1SvImJ_G0019050.1 mouse_genomes_project 11 100611877 100668692 - MGP_129S1SvImJ_P0032098 Fbxl20 protein_coding protein_coding MGP_129S1SvImJ_T0032099.1 MGP_129S1SvImJ_G0019050.1 mouse_genomes_project 11 100615233 100644973 - Fbxl20 protein_coding processed_transcript MGP_129S1SvImJ_T0032100.1 MGP_129S1SvImJ_G0019050.1 mouse_genomes_project 11 100622993 100644973 - MGP_129S1SvImJ_P0032100 Fbxl20 protein_coding protein_coding MGP_129S1SvImJ_T0032101.1 MGP_129S1SvImJ_G0019050.1 mouse_genomes_project 11 100643990 100644957 - Fbxl20 protein_coding processed_transcript MGP_129S1SvImJ_T0011318.1 MGP_129S1SvImJ_G0009434.1 mouse_genomes_project 11 49690638 49690914 - Gm23824 misc_RNA misc_RNA MGP_129S1SvImJ_T0028858.1 MGP_129S1SvImJ_G0018247.1 mouse_genomes_project 11 49467666 49498950 - MGP_129S1SvImJ_P0028858 Canx protein_coding protein_coding MGP_129S1SvImJ_T0028859.1 MGP_129S1SvImJ_G0018247.1 mouse_genomes_project 11 49468172 49498950 - MGP_129S1SvImJ_P0028859 Canx protein_coding protein_coding MGP_129S1SvImJ_T0028860.1 MGP_129S1SvImJ_G0018247.1 mouse_genomes_project 11 49469898 49473078 - Canx protein_coding processed_transcript MGP_129S1SvImJ_T0028861.1 MGP_129S1SvImJ_G0018247.1 mouse_genomes_project 11 49471063 49472019 - Canx protein_coding processed_transcript MGP_129S1SvImJ_T0028862.1 MGP_129S1SvImJ_G0018247.1 mouse_genomes_project 11 49472537 49474690 - Canx protein_coding processed_transcript MGP_129S1SvImJ_T0030843.1 MGP_129S1SvImJ_G0018741.1 mouse_genomes_project 11 77807101 77850879 + MGP_129S1SvImJ_P0030843 Blmh protein_coding protein_coding MGP_129S1SvImJ_T0030844.1 MGP_129S1SvImJ_G0018741.1 mouse_genomes_project 11 77807136 77808166 + Blmh protein_coding retained_intron MGP_129S1SvImJ_T0030845.1 MGP_129S1SvImJ_G0018741.1 mouse_genomes_project 11 77807146 77830899 + Blmh protein_coding retained_intron MGP_129S1SvImJ_T0030846.1 MGP_129S1SvImJ_G0018741.1 mouse_genomes_project 11 77807228 77829916 + MGP_129S1SvImJ_P0030846 Blmh protein_coding protein_coding MGP_129S1SvImJ_T0030847.1 MGP_129S1SvImJ_G0018741.1 mouse_genomes_project 11 77807258 77850324 + MGP_129S1SvImJ_P0030847 Blmh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030848.1 MGP_129S1SvImJ_G0018741.1 mouse_genomes_project 11 77807454 77816034 + MGP_129S1SvImJ_P0030848 Blmh protein_coding protein_coding MGP_129S1SvImJ_T0030849.1 MGP_129S1SvImJ_G0018741.1 mouse_genomes_project 11 77807475 77813940 + MGP_129S1SvImJ_P0030849 Blmh protein_coding protein_coding MGP_129S1SvImJ_T0030850.1 MGP_129S1SvImJ_G0018741.1 mouse_genomes_project 11 77823613 77828953 + Blmh protein_coding processed_transcript MGP_129S1SvImJ_T0031426.1 MGP_129S1SvImJ_G0018886.1 mouse_genomes_project 11 87601199 87745370 - MGP_129S1SvImJ_P0031426 Brip1 protein_coding protein_coding MGP_129S1SvImJ_T0031427.1 MGP_129S1SvImJ_G0018886.1 mouse_genomes_project 11 87739212 87745341 - Brip1 protein_coding processed_transcript MGP_129S1SvImJ_T0031428.1 MGP_129S1SvImJ_G0018886.1 mouse_genomes_project 11 87739878 87745343 - Brip1 protein_coding processed_transcript MGP_129S1SvImJ_T0102155.1 MGP_129S1SvImJ_G0039990.1 mouse_genomes_project 11 97026222 97026964 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0032265.1 MGP_129S1SvImJ_G0019096.1 mouse_genomes_project 11 102210735 102216407 - MGP_129S1SvImJ_P0032265 Krt40 protein_coding protein_coding MGP_129S1SvImJ_T0032266.1 MGP_129S1SvImJ_G0019096.1 mouse_genomes_project 11 102210735 102216407 - MGP_129S1SvImJ_P0032266 Krt40 protein_coding protein_coding MGP_129S1SvImJ_T0012585.1 MGP_129S1SvImJ_G0010674.1 mouse_genomes_project 11 39280446 39280792 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017315.1 MGP_129S1SvImJ_G0015219.1 mouse_genomes_project 11 118056742 118057684 + 1700092K14Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0029991.1 MGP_129S1SvImJ_G0018538.1 mouse_genomes_project 11 70027959 70039649 + MGP_129S1SvImJ_P0029991 Trp53 protein_coding protein_coding MGP_129S1SvImJ_T0029992.1 MGP_129S1SvImJ_G0018538.1 mouse_genomes_project 11 70027959 70039648 + MGP_129S1SvImJ_P0029992 Trp53 protein_coding protein_coding MGP_129S1SvImJ_T0029993.1 MGP_129S1SvImJ_G0018538.1 mouse_genomes_project 11 70027959 70039648 + MGP_129S1SvImJ_P0029993 Trp53 protein_coding protein_coding MGP_129S1SvImJ_T0029994.1 MGP_129S1SvImJ_G0018538.1 mouse_genomes_project 11 70028002 70038120 + Trp53 protein_coding processed_transcript MGP_129S1SvImJ_T0029995.1 MGP_129S1SvImJ_G0018538.1 mouse_genomes_project 11 70034491 70039084 + MGP_129S1SvImJ_P0029995 Trp53 protein_coding protein_coding MGP_129S1SvImJ_T0029996.1 MGP_129S1SvImJ_G0018538.1 mouse_genomes_project 11 70036309 70037436 + Trp53 protein_coding processed_transcript MGP_129S1SvImJ_T0009762.1 MGP_129S1SvImJ_G0007878.1 mouse_genomes_project 11 104276957 104277024 - Mir6929 miRNA miRNA MGP_129S1SvImJ_T0032128.1 MGP_129S1SvImJ_G0019057.1 mouse_genomes_project 11 100927210 100928948 + MGP_129S1SvImJ_P0032128 Pnmt protein_coding protein_coding MGP_129S1SvImJ_T0032129.1 MGP_129S1SvImJ_G0019057.1 mouse_genomes_project 11 100927472 100928243 + Pnmt protein_coding processed_transcript MGP_129S1SvImJ_T0032665.1 MGP_129S1SvImJ_G0019221.1 mouse_genomes_project 11 105051327 105052474 - MGP_129S1SvImJ_P0032665 Pyy protein_coding protein_coding MGP_129S1SvImJ_T0032666.1 MGP_129S1SvImJ_G0019221.1 mouse_genomes_project 11 105051327 105052484 - MGP_129S1SvImJ_P0032666 Pyy protein_coding protein_coding MGP_129S1SvImJ_T0032667.1 MGP_129S1SvImJ_G0019221.1 mouse_genomes_project 11 105051331 105052068 - MGP_129S1SvImJ_P0032667 Pyy protein_coding protein_coding MGP_129S1SvImJ_T0032668.1 MGP_129S1SvImJ_G0019221.1 mouse_genomes_project 11 105051612 105052484 - Pyy protein_coding retained_intron MGP_129S1SvImJ_T0003165.1 MGP_129S1SvImJ_G0002940.1 mouse_genomes_project 11 42006749 42059515 - Gm12147 antisense antisense MGP_129S1SvImJ_T0006358.1 MGP_129S1SvImJ_G0005301.1 mouse_genomes_project 11 105994113 106001043 - 2410004I01Rik lincRNA lincRNA MGP_129S1SvImJ_T0033071.1 MGP_129S1SvImJ_G0019304.1 mouse_genomes_project 11 109601841 109605265 - MGP_129S1SvImJ_P0033071 Cd79b protein_coding protein_coding MGP_129S1SvImJ_T0033072.1 MGP_129S1SvImJ_G0019304.1 mouse_genomes_project 11 109601844 109605032 - MGP_129S1SvImJ_P0033072 Cd79b protein_coding protein_coding MGP_129S1SvImJ_T0099235.1 MGP_129S1SvImJ_G0037302.1 mouse_genomes_project 11 37333977 37334068 - Gm23520 snRNA snRNA MGP_129S1SvImJ_T0012485.1 MGP_129S1SvImJ_G0010574.1 mouse_genomes_project 11 3698869 3699350 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032680.1 MGP_129S1SvImJ_G0019225.1 mouse_genomes_project 11 105142302 105146754 + MGP_129S1SvImJ_P0032680 G6pc3 protein_coding protein_coding MGP_129S1SvImJ_T0032681.1 MGP_129S1SvImJ_G0019225.1 mouse_genomes_project 11 105142351 105146754 + MGP_129S1SvImJ_P0032681 G6pc3 protein_coding protein_coding MGP_129S1SvImJ_T0032682.1 MGP_129S1SvImJ_G0019225.1 mouse_genomes_project 11 105142437 105144814 + G6pc3 protein_coding processed_transcript MGP_129S1SvImJ_T0032683.1 MGP_129S1SvImJ_G0019225.1 mouse_genomes_project 11 105142508 105145873 + G6pc3 protein_coding processed_transcript MGP_129S1SvImJ_T0032684.1 MGP_129S1SvImJ_G0019225.1 mouse_genomes_project 11 105144481 105146325 + G6pc3 protein_coding processed_transcript MGP_129S1SvImJ_T0032685.1 MGP_129S1SvImJ_G0019225.1 mouse_genomes_project 11 105144691 105146271 + G6pc3 protein_coding processed_transcript MGP_129S1SvImJ_T0032686.1 MGP_129S1SvImJ_G0019225.1 mouse_genomes_project 11 105144697 105146424 + G6pc3 protein_coding processed_transcript MGP_129S1SvImJ_T0033723.1 MGP_129S1SvImJ_G0019434.1 mouse_genomes_project 11 120789581 120799765 - MGP_129S1SvImJ_P0033723 Cygb protein_coding protein_coding MGP_129S1SvImJ_T0030985.1 MGP_129S1SvImJ_G0018767.1 mouse_genomes_project 11 79162561 79164707 - Rpl23a protein_coding retained_intron MGP_129S1SvImJ_T0030986.1 MGP_129S1SvImJ_G0018767.1 mouse_genomes_project 11 79162564 79163260 - Rpl23a protein_coding retained_intron MGP_129S1SvImJ_T0030987.1 MGP_129S1SvImJ_G0018767.1 mouse_genomes_project 11 79162564 79165214 - MGP_129S1SvImJ_P0030987 Rpl23a protein_coding protein_coding MGP_129S1SvImJ_T0003218.1 MGP_129S1SvImJ_G0002986.1 mouse_genomes_project 11 62826640 62830021 - antisense antisense MGP_129S1SvImJ_T0028886.1 MGP_129S1SvImJ_G0018252.1 mouse_genomes_project 11 50003165 50020781 - MGP_129S1SvImJ_P0028886 Zfp354c protein_coding protein_coding MGP_129S1SvImJ_T0028887.1 MGP_129S1SvImJ_G0018252.1 mouse_genomes_project 11 50006643 50019549 - MGP_129S1SvImJ_P0028887 Zfp354c protein_coding protein_coding MGP_129S1SvImJ_T0028888.1 MGP_129S1SvImJ_G0018252.1 mouse_genomes_project 11 50009272 50020777 - Zfp354c protein_coding processed_transcript MGP_129S1SvImJ_T0028889.1 MGP_129S1SvImJ_G0018252.1 mouse_genomes_project 11 50019366 50020815 - Zfp354c protein_coding processed_transcript MGP_129S1SvImJ_T0012777.1 MGP_129S1SvImJ_G0010866.1 mouse_genomes_project 11 112203804 112204228 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031623.1 MGP_129S1SvImJ_G0018936.1 mouse_genomes_project 11 91829402 91838122 + MGP_129S1SvImJ_P0031623 Tmem100 protein_coding protein_coding MGP_129S1SvImJ_T0009681.1 MGP_129S1SvImJ_G0007797.1 mouse_genomes_project 11 43309928 43309978 + Gm22121 miRNA miRNA MGP_129S1SvImJ_T0033405.1 MGP_129S1SvImJ_G0019378.1 mouse_genomes_project 11 119288376 119310446 - MGP_129S1SvImJ_P0033405 Fads6 protein_coding protein_coding MGP_129S1SvImJ_T0033406.1 MGP_129S1SvImJ_G0019378.1 mouse_genomes_project 11 119307935 119310595 - Fads6 protein_coding processed_transcript MGP_129S1SvImJ_T0009685.1 MGP_129S1SvImJ_G0007801.1 mouse_genomes_project 11 49046682 49046797 + Gm23492 miRNA miRNA MGP_129S1SvImJ_T0029546.1 MGP_129S1SvImJ_G0018439.1 mouse_genomes_project 11 61447900 61451367 + MGP_129S1SvImJ_P0029546 Mfap4 protein_coding protein_coding MGP_129S1SvImJ_T0029547.1 MGP_129S1SvImJ_G0018439.1 mouse_genomes_project 11 61447930 61450542 + MGP_129S1SvImJ_P0029547 Mfap4 protein_coding protein_coding MGP_129S1SvImJ_T0029548.1 MGP_129S1SvImJ_G0018439.1 mouse_genomes_project 11 61447960 61449422 + Mfap4 protein_coding processed_transcript MGP_129S1SvImJ_T0029549.1 MGP_129S1SvImJ_G0018439.1 mouse_genomes_project 11 61447985 61451367 + Mfap4 protein_coding processed_transcript MGP_129S1SvImJ_T0012536.1 MGP_129S1SvImJ_G0010625.1 mouse_genomes_project 11 19512865 19513809 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032742.1 MGP_129S1SvImJ_G0019233.1 mouse_genomes_project 11 105363605 105371951 + MGP_129S1SvImJ_P0032742 Rundc3a protein_coding protein_coding MGP_129S1SvImJ_T0032743.1 MGP_129S1SvImJ_G0019233.1 mouse_genomes_project 11 105363605 105371951 + MGP_129S1SvImJ_P0032743 Rundc3a protein_coding protein_coding MGP_129S1SvImJ_T0032744.1 MGP_129S1SvImJ_G0019233.1 mouse_genomes_project 11 105363605 105371951 + MGP_129S1SvImJ_P0032744 Rundc3a protein_coding protein_coding MGP_129S1SvImJ_T0032745.1 MGP_129S1SvImJ_G0019233.1 mouse_genomes_project 11 105363605 105372752 + MGP_129S1SvImJ_P0032745 Rundc3a protein_coding protein_coding MGP_129S1SvImJ_T0032746.1 MGP_129S1SvImJ_G0019233.1 mouse_genomes_project 11 105368059 105372752 + Rundc3a protein_coding retained_intron MGP_129S1SvImJ_T0032747.1 MGP_129S1SvImJ_G0019233.1 mouse_genomes_project 11 105368314 105369976 + Rundc3a protein_coding processed_transcript MGP_129S1SvImJ_T0032748.1 MGP_129S1SvImJ_G0019233.1 mouse_genomes_project 11 105369363 105372426 + Rundc3a protein_coding processed_transcript MGP_129S1SvImJ_T0032749.1 MGP_129S1SvImJ_G0019233.1 mouse_genomes_project 11 105369760 105372423 + Rundc3a protein_coding processed_transcript MGP_129S1SvImJ_T0032750.1 MGP_129S1SvImJ_G0019233.1 mouse_genomes_project 11 105369952 105372349 + Rundc3a protein_coding processed_transcript MGP_129S1SvImJ_T0032751.1 MGP_129S1SvImJ_G0019233.1 mouse_genomes_project 11 105370054 105370982 + Rundc3a protein_coding processed_transcript MGP_129S1SvImJ_T0030249.1 MGP_129S1SvImJ_G0018589.1 mouse_genomes_project 11 70758663 70760320 - MGP_129S1SvImJ_P0030249 Rnasek protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030250.1 MGP_129S1SvImJ_G0018589.1 mouse_genomes_project 11 70758663 70760382 - MGP_129S1SvImJ_P0030250 Rnasek protein_coding protein_coding MGP_129S1SvImJ_T0030251.1 MGP_129S1SvImJ_G0018589.1 mouse_genomes_project 11 70758666 70759598 - MGP_129S1SvImJ_P0030251 Rnasek protein_coding protein_coding MGP_129S1SvImJ_T0006309.1 MGP_129S1SvImJ_G0005269.1 mouse_genomes_project 11 84540941 84544073 + AI662270 lincRNA lincRNA MGP_129S1SvImJ_T0006310.1 MGP_129S1SvImJ_G0005269.1 mouse_genomes_project 11 84540941 84543240 + AI662270 lincRNA lincRNA MGP_129S1SvImJ_T0006311.1 MGP_129S1SvImJ_G0005269.1 mouse_genomes_project 11 84541514 84541964 + AI662270 lincRNA lincRNA MGP_129S1SvImJ_T0031675.1 MGP_129S1SvImJ_G0018946.1 mouse_genomes_project 11 95977924 95984786 - MGP_129S1SvImJ_P0031675 Nme2 protein_coding protein_coding MGP_129S1SvImJ_T0031676.1 MGP_129S1SvImJ_G0018946.1 mouse_genomes_project 11 95977927 95984310 - MGP_129S1SvImJ_P0031676 Nme2 protein_coding protein_coding MGP_129S1SvImJ_T0012704.1 MGP_129S1SvImJ_G0010793.1 mouse_genomes_project 11 81030608 81030755 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009686.1 MGP_129S1SvImJ_G0007802.1 mouse_genomes_project 11 49225972 49226070 + Mir340 miRNA miRNA MGP_129S1SvImJ_T0030590.1 MGP_129S1SvImJ_G0018672.1 mouse_genomes_project 11 74470828 74475030 - MGP_129S1SvImJ_P0030590 Olfr389 protein_coding protein_coding MGP_129S1SvImJ_T0030591.1 MGP_129S1SvImJ_G0018672.1 mouse_genomes_project 11 74471094 74474976 - MGP_129S1SvImJ_P0030591 Olfr389 protein_coding protein_coding MGP_129S1SvImJ_T0031278.1 MGP_129S1SvImJ_G0018847.1 mouse_genomes_project 11 84743191 84750745 - MGP_129S1SvImJ_P0031278 Gas2l2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031279.1 MGP_129S1SvImJ_G0018847.1 mouse_genomes_project 11 84743191 84750745 - MGP_129S1SvImJ_P0031279 Gas2l2 protein_coding protein_coding MGP_129S1SvImJ_T0028600.1 MGP_129S1SvImJ_G0018168.1 mouse_genomes_project 11 41135229 41353718 + MGP_129S1SvImJ_P0028600 Gabrb2 protein_coding protein_coding MGP_129S1SvImJ_T0028601.1 MGP_129S1SvImJ_G0018168.1 mouse_genomes_project 11 41135236 41138103 + Gabrb2 protein_coding processed_transcript MGP_129S1SvImJ_T0028602.1 MGP_129S1SvImJ_G0018168.1 mouse_genomes_project 11 41136743 41206521 + Gabrb2 protein_coding processed_transcript MGP_129S1SvImJ_T0028603.1 MGP_129S1SvImJ_G0018168.1 mouse_genomes_project 11 41136774 41252215 + Gabrb2 protein_coding processed_transcript MGP_129S1SvImJ_T0028604.1 MGP_129S1SvImJ_G0018168.1 mouse_genomes_project 11 41136814 41351581 + MGP_129S1SvImJ_P0028604 Gabrb2 protein_coding protein_coding MGP_129S1SvImJ_T0012737.1 MGP_129S1SvImJ_G0010826.1 mouse_genomes_project 11 98555376 98556662 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033013.1 MGP_129S1SvImJ_G0019287.1 mouse_genomes_project 11 109195777 109206307 - MGP_129S1SvImJ_P0033013 Cyb561 protein_coding protein_coding MGP_129S1SvImJ_T0033014.1 MGP_129S1SvImJ_G0019287.1 mouse_genomes_project 11 109197167 109206216 - MGP_129S1SvImJ_P0033014 Cyb561 protein_coding protein_coding MGP_129S1SvImJ_T0033015.1 MGP_129S1SvImJ_G0019287.1 mouse_genomes_project 11 109197572 109198261 - Cyb561 protein_coding processed_transcript MGP_129S1SvImJ_T0033016.1 MGP_129S1SvImJ_G0019287.1 mouse_genomes_project 11 109197882 109215288 - MGP_129S1SvImJ_P0033016 Cyb561 protein_coding protein_coding MGP_129S1SvImJ_T0033017.1 MGP_129S1SvImJ_G0019287.1 mouse_genomes_project 11 109198293 109206506 - MGP_129S1SvImJ_P0033017 Cyb561 protein_coding protein_coding MGP_129S1SvImJ_T0033018.1 MGP_129S1SvImJ_G0019287.1 mouse_genomes_project 11 109198638 109206564 - MGP_129S1SvImJ_P0033018 Cyb561 protein_coding protein_coding MGP_129S1SvImJ_T0012542.1 MGP_129S1SvImJ_G0010631.1 mouse_genomes_project 11 21713515 21713774 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012700.1 MGP_129S1SvImJ_G0010789.1 mouse_genomes_project 11 80289708 80290156 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099242.1 MGP_129S1SvImJ_G0037309.1 mouse_genomes_project 11 54316706 54316876 + Gm23021 snRNA snRNA MGP_129S1SvImJ_T0012600.1 MGP_129S1SvImJ_G0010689.1 mouse_genomes_project 11 47609981 47610512 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033368.1 MGP_129S1SvImJ_G0019368.1 mouse_genomes_project 11 118975499 118982469 - MGP_129S1SvImJ_P0033368 Cd300c2 protein_coding protein_coding MGP_129S1SvImJ_T0033369.1 MGP_129S1SvImJ_G0019368.1 mouse_genomes_project 11 118975500 118982469 - MGP_129S1SvImJ_P0033369 Cd300c2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032333.1 MGP_129S1SvImJ_G0019150.1 mouse_genomes_project 11 103094296 103096886 + MGP_129S1SvImJ_P0032333 Gast protein_coding protein_coding MGP_129S1SvImJ_T0032657.1 MGP_129S1SvImJ_G0019219.1 mouse_genomes_project 11 105000573 105032207 - MGP_129S1SvImJ_P0032657 Mpp2 protein_coding protein_coding MGP_129S1SvImJ_T0032658.1 MGP_129S1SvImJ_G0019219.1 mouse_genomes_project 11 105001082 105026189 - MGP_129S1SvImJ_P0032658 Mpp2 protein_coding protein_coding MGP_129S1SvImJ_T0032659.1 MGP_129S1SvImJ_G0019219.1 mouse_genomes_project 11 105005622 105026124 - Mpp2 protein_coding processed_transcript MGP_129S1SvImJ_T0032660.1 MGP_129S1SvImJ_G0019219.1 mouse_genomes_project 11 105008203 105029438 - Mpp2 protein_coding retained_intron MGP_129S1SvImJ_T0032661.1 MGP_129S1SvImJ_G0019219.1 mouse_genomes_project 11 105024356 105032159 - Mpp2 protein_coding processed_transcript MGP_129S1SvImJ_T0032662.1 MGP_129S1SvImJ_G0019219.1 mouse_genomes_project 11 105024410 105032147 - Mpp2 protein_coding processed_transcript MGP_129S1SvImJ_T0012652.1 MGP_129S1SvImJ_G0010741.1 mouse_genomes_project 11 61382938 61383352 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034059.1 MGP_129S1SvImJ_G0019501.1 mouse_genomes_project 11 124924310 124925773 - MGP_129S1SvImJ_P0034059 Oxld1 protein_coding protein_coding MGP_129S1SvImJ_T0034060.1 MGP_129S1SvImJ_G0019501.1 mouse_genomes_project 11 124924589 124925641 - MGP_129S1SvImJ_P0034060 Oxld1 protein_coding protein_coding MGP_129S1SvImJ_T0028198.1 MGP_129S1SvImJ_G0018072.1 mouse_genomes_project 11 18919832 18971461 - MGP_129S1SvImJ_P0028198 Ugp2 protein_coding protein_coding MGP_129S1SvImJ_T0028199.1 MGP_129S1SvImJ_G0018072.1 mouse_genomes_project 11 18920367 18972185 - MGP_129S1SvImJ_P0028199 Ugp2 protein_coding protein_coding MGP_129S1SvImJ_T0028200.1 MGP_129S1SvImJ_G0018072.1 mouse_genomes_project 11 18920618 18928579 - Ugp2 protein_coding processed_transcript MGP_129S1SvImJ_T0028201.1 MGP_129S1SvImJ_G0018072.1 mouse_genomes_project 11 18920634 18922197 - Ugp2 protein_coding processed_transcript MGP_129S1SvImJ_T0032840.1 MGP_129S1SvImJ_G0019248.1 mouse_genomes_project 11 105915743 105917308 + MGP_129S1SvImJ_P0032840 Fam187a protein_coding protein_coding MGP_129S1SvImJ_T0028125.1 MGP_129S1SvImJ_G0018052.1 mouse_genomes_project 11 14133046 14275262 + MGP_129S1SvImJ_P0028125 Egfr protein_coding protein_coding MGP_129S1SvImJ_T0028126.1 MGP_129S1SvImJ_G0018052.1 mouse_genomes_project 11 14133054 14307089 + MGP_129S1SvImJ_P0028126 Egfr protein_coding protein_coding MGP_129S1SvImJ_T0028127.1 MGP_129S1SvImJ_G0018052.1 mouse_genomes_project 11 14133073 14175397 + Egfr protein_coding processed_transcript MGP_129S1SvImJ_T0028128.1 MGP_129S1SvImJ_G0018052.1 mouse_genomes_project 11 14264057 14271696 + MGP_129S1SvImJ_P0028128 Egfr protein_coding protein_coding MGP_129S1SvImJ_T0028129.1 MGP_129S1SvImJ_G0018052.1 mouse_genomes_project 11 14294141 14299783 + Egfr protein_coding processed_transcript MGP_129S1SvImJ_T0006267.1 MGP_129S1SvImJ_G0005237.1 mouse_genomes_project 11 61850924 61853073 + Gm26964 lincRNA lincRNA MGP_129S1SvImJ_T0030096.1 MGP_129S1SvImJ_G0018565.1 mouse_genomes_project 11 70366115 70375992 - MGP_129S1SvImJ_P0030096 Acap1 protein_coding protein_coding MGP_129S1SvImJ_T0030097.1 MGP_129S1SvImJ_G0018565.1 mouse_genomes_project 11 70366115 70381210 - MGP_129S1SvImJ_P0030097 Acap1 protein_coding protein_coding MGP_129S1SvImJ_T0030098.1 MGP_129S1SvImJ_G0018565.1 mouse_genomes_project 11 70366173 70385938 - MGP_129S1SvImJ_P0030098 Acap1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0030099.1 MGP_129S1SvImJ_G0018565.1 mouse_genomes_project 11 70368047 70372990 - Acap1 protein_coding processed_transcript MGP_129S1SvImJ_T0030100.1 MGP_129S1SvImJ_G0018565.1 mouse_genomes_project 11 70375034 70376152 - Acap1 protein_coding processed_transcript MGP_129S1SvImJ_T0030777.1 MGP_129S1SvImJ_G0018727.1 mouse_genomes_project 11 76839042 76997380 - MGP_129S1SvImJ_P0030777 Vps53 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0030778.1 MGP_129S1SvImJ_G0018727.1 mouse_genomes_project 11 76842614 76997528 - MGP_129S1SvImJ_P0030778 Vps53 protein_coding protein_coding MGP_129S1SvImJ_T0030779.1 MGP_129S1SvImJ_G0018727.1 mouse_genomes_project 11 76842684 76997505 - MGP_129S1SvImJ_P0030779 Vps53 protein_coding protein_coding MGP_129S1SvImJ_T0030780.1 MGP_129S1SvImJ_G0018727.1 mouse_genomes_project 11 76842685 76997498 - MGP_129S1SvImJ_P0030780 Vps53 protein_coding protein_coding MGP_129S1SvImJ_T0030781.1 MGP_129S1SvImJ_G0018727.1 mouse_genomes_project 11 76858375 76889740 - Vps53 protein_coding retained_intron MGP_129S1SvImJ_T0030782.1 MGP_129S1SvImJ_G0018727.1 mouse_genomes_project 11 76859314 76997380 - MGP_129S1SvImJ_P0030782 Vps53 protein_coding protein_coding MGP_129S1SvImJ_T0030783.1 MGP_129S1SvImJ_G0018727.1 mouse_genomes_project 11 76859319 76997380 - MGP_129S1SvImJ_P0030783 Vps53 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030784.1 MGP_129S1SvImJ_G0018727.1 mouse_genomes_project 11 76859319 76997397 - MGP_129S1SvImJ_P0030784 Vps53 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030785.1 MGP_129S1SvImJ_G0018727.1 mouse_genomes_project 11 76916259 76997413 - MGP_129S1SvImJ_P0030785 Vps53 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030786.1 MGP_129S1SvImJ_G0018727.1 mouse_genomes_project 11 76916874 76983211 - MGP_129S1SvImJ_P0030786 Vps53 protein_coding protein_coding MGP_129S1SvImJ_T0030788.1 MGP_129S1SvImJ_G0018727.1 mouse_genomes_project 11 76920643 76997468 - Vps53 protein_coding retained_intron MGP_129S1SvImJ_T0030789.1 MGP_129S1SvImJ_G0018727.1 mouse_genomes_project 11 76920759 76992754 - Vps53 protein_coding processed_transcript MGP_129S1SvImJ_T0030790.1 MGP_129S1SvImJ_G0018727.1 mouse_genomes_project 11 76920764 76939948 - Vps53 protein_coding processed_transcript MGP_129S1SvImJ_T0030791.1 MGP_129S1SvImJ_G0018727.1 mouse_genomes_project 11 76933011 76972114 - Vps53 protein_coding processed_transcript MGP_129S1SvImJ_T0030792.1 MGP_129S1SvImJ_G0018727.1 mouse_genomes_project 11 76934787 76997515 - MGP_129S1SvImJ_P0030792 Vps53 protein_coding protein_coding MGP_129S1SvImJ_T0030793.1 MGP_129S1SvImJ_G0018727.1 mouse_genomes_project 11 76987516 76997493 - Vps53 protein_coding processed_transcript MGP_129S1SvImJ_T0030794.1 MGP_129S1SvImJ_G0018727.1 mouse_genomes_project 11 76993924 76997519 - MGP_129S1SvImJ_P0030794 Vps53 protein_coding protein_coding MGP_129S1SvImJ_T0003298.1 MGP_129S1SvImJ_G0003048.1 mouse_genomes_project 11 99286410 99291419 - Gm11525 antisense antisense MGP_129S1SvImJ_T0003378.1 MGP_129S1SvImJ_G0003113.1 mouse_genomes_project 11 124363077 124369973 - Gm11767 antisense antisense MGP_129S1SvImJ_T0009734.1 MGP_129S1SvImJ_G0007850.1 mouse_genomes_project 11 80830795 80830861 + Mir193a miRNA miRNA MGP_129S1SvImJ_T0031635.1 MGP_129S1SvImJ_G0018939.1 mouse_genomes_project 11 92310898 92481564 - MGP_129S1SvImJ_P0031635 Stxbp4 protein_coding protein_coding MGP_129S1SvImJ_T0031636.1 MGP_129S1SvImJ_G0018939.1 mouse_genomes_project 11 92326460 92387216 - MGP_129S1SvImJ_P0031636 Stxbp4 protein_coding protein_coding MGP_129S1SvImJ_T0031637.1 MGP_129S1SvImJ_G0018939.1 mouse_genomes_project 11 92370366 92481542 - MGP_129S1SvImJ_P0031637 Stxbp4 protein_coding protein_coding MGP_129S1SvImJ_T0031638.1 MGP_129S1SvImJ_G0018939.1 mouse_genomes_project 11 92437597 92481545 - MGP_129S1SvImJ_P0031638 Stxbp4 protein_coding protein_coding MGP_129S1SvImJ_T0031639.1 MGP_129S1SvImJ_G0018939.1 mouse_genomes_project 11 92441561 92481556 - MGP_129S1SvImJ_P0031639 Stxbp4 protein_coding protein_coding MGP_129S1SvImJ_T0031640.1 MGP_129S1SvImJ_G0018939.1 mouse_genomes_project 11 92461318 92474416 - MGP_129S1SvImJ_P0031640 Stxbp4 protein_coding protein_coding MGP_129S1SvImJ_T0031641.1 MGP_129S1SvImJ_G0018939.1 mouse_genomes_project 11 92473709 92481553 - Stxbp4 protein_coding processed_transcript MGP_129S1SvImJ_T0033211.1 MGP_129S1SvImJ_G0019331.1 mouse_genomes_project 11 112916240 112955725 + MGP_129S1SvImJ_P0033211 Gna13 protein_coding protein_coding MGP_129S1SvImJ_T0033212.1 MGP_129S1SvImJ_G0019331.1 mouse_genomes_project 11 112916240 112935103 + MGP_129S1SvImJ_P0033212 Gna13 protein_coding protein_coding MGP_129S1SvImJ_T0100504.1 MGP_129S1SvImJ_G0038571.1 mouse_genomes_project 11 60723705 60723831 + Gm24945 snoRNA snoRNA MGP_129S1SvImJ_T0028118.1 MGP_129S1SvImJ_G0018051.1 mouse_genomes_project 11 13875913 13884660 - MGP_129S1SvImJ_P0028118 Sec61g protein_coding protein_coding MGP_129S1SvImJ_T0028119.1 MGP_129S1SvImJ_G0018051.1 mouse_genomes_project 11 13877562 13884342 - MGP_129S1SvImJ_P0028119 Sec61g protein_coding protein_coding MGP_129S1SvImJ_T0028120.1 MGP_129S1SvImJ_G0018051.1 mouse_genomes_project 11 13877813 13884660 - MGP_129S1SvImJ_P0028120 Sec61g protein_coding protein_coding MGP_129S1SvImJ_T0028121.1 MGP_129S1SvImJ_G0018051.1 mouse_genomes_project 11 13877813 13884660 - MGP_129S1SvImJ_P0028121 Sec61g protein_coding protein_coding MGP_129S1SvImJ_T0028122.1 MGP_129S1SvImJ_G0018051.1 mouse_genomes_project 11 13877818 13881220 - Sec61g protein_coding retained_intron MGP_129S1SvImJ_T0028123.1 MGP_129S1SvImJ_G0018051.1 mouse_genomes_project 11 13877826 13884245 - MGP_129S1SvImJ_P0028123 Sec61g protein_coding protein_coding MGP_129S1SvImJ_T0028124.1 MGP_129S1SvImJ_G0018051.1 mouse_genomes_project 11 13882267 13884308 - Sec61g protein_coding retained_intron MGP_129S1SvImJ_T0033552.1 MGP_129S1SvImJ_G0019403.1 mouse_genomes_project 11 119932977 119968920 + MGP_129S1SvImJ_P0033552 Myo15b protein_coding protein_coding MGP_129S1SvImJ_T0033553.1 MGP_129S1SvImJ_G0019403.1 mouse_genomes_project 11 119953824 119956459 + Myo15b protein_coding processed_transcript MGP_129S1SvImJ_T0033554.1 MGP_129S1SvImJ_G0019403.1 mouse_genomes_project 11 119953842 119957566 + MGP_129S1SvImJ_P0033554 Myo15b protein_coding protein_coding MGP_129S1SvImJ_T0033555.1 MGP_129S1SvImJ_G0019403.1 mouse_genomes_project 11 119956728 119963789 + MGP_129S1SvImJ_P0033555 Myo15b protein_coding protein_coding MGP_129S1SvImJ_T0033556.1 MGP_129S1SvImJ_G0019403.1 mouse_genomes_project 11 119962780 119963790 + MGP_129S1SvImJ_P0033556 Myo15b protein_coding protein_coding MGP_129S1SvImJ_T0033557.1 MGP_129S1SvImJ_G0019403.1 mouse_genomes_project 11 119963151 119968916 + Myo15b protein_coding retained_intron MGP_129S1SvImJ_T0033558.1 MGP_129S1SvImJ_G0019403.1 mouse_genomes_project 11 119963944 119968931 + MGP_129S1SvImJ_P0033558 Myo15b protein_coding protein_coding MGP_129S1SvImJ_T0033559.1 MGP_129S1SvImJ_G0019403.1 mouse_genomes_project 11 119966566 119967497 + Myo15b protein_coding retained_intron MGP_129S1SvImJ_T0033888.1 MGP_129S1SvImJ_G0019469.1 mouse_genomes_project 11 122801745 122814236 + MGP_129S1SvImJ_P0033888 Engase protein_coding protein_coding MGP_129S1SvImJ_T0033889.1 MGP_129S1SvImJ_G0019469.1 mouse_genomes_project 11 122801857 122804170 + MGP_129S1SvImJ_P0033889 Engase protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033890.1 MGP_129S1SvImJ_G0019469.1 mouse_genomes_project 11 122801862 122808091 + MGP_129S1SvImJ_P0033890 Engase protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033891.1 MGP_129S1SvImJ_G0019469.1 mouse_genomes_project 11 122801876 122814114 + MGP_129S1SvImJ_P0033891 Engase protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033892.1 MGP_129S1SvImJ_G0019469.1 mouse_genomes_project 11 122801888 122812800 + MGP_129S1SvImJ_P0033892 Engase protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033893.1 MGP_129S1SvImJ_G0019469.1 mouse_genomes_project 11 122801899 122814236 + MGP_129S1SvImJ_P0033893 Engase protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033894.1 MGP_129S1SvImJ_G0019469.1 mouse_genomes_project 11 122806115 122807973 + Engase protein_coding retained_intron MGP_129S1SvImJ_T0033895.1 MGP_129S1SvImJ_G0019469.1 mouse_genomes_project 11 122807415 122812800 + Engase protein_coding retained_intron MGP_129S1SvImJ_T0033896.1 MGP_129S1SvImJ_G0019469.1 mouse_genomes_project 11 122809516 122812536 + MGP_129S1SvImJ_P0033896 Engase protein_coding protein_coding MGP_129S1SvImJ_T0029072.1 MGP_129S1SvImJ_G0018304.1 mouse_genomes_project 11 53188447 53195756 + MGP_129S1SvImJ_P0029072 Irf1 protein_coding protein_coding MGP_129S1SvImJ_T0029073.1 MGP_129S1SvImJ_G0018304.1 mouse_genomes_project 11 53188481 53193536 + MGP_129S1SvImJ_P0029073 Irf1 protein_coding protein_coding MGP_129S1SvImJ_T0029074.1 MGP_129S1SvImJ_G0018304.1 mouse_genomes_project 11 53188484 53196807 + MGP_129S1SvImJ_P0029074 Irf1 protein_coding protein_coding MGP_129S1SvImJ_T0029075.1 MGP_129S1SvImJ_G0018304.1 mouse_genomes_project 11 53188504 53194811 + Irf1 protein_coding processed_transcript MGP_129S1SvImJ_T0029076.1 MGP_129S1SvImJ_G0018304.1 mouse_genomes_project 11 53188538 53192518 + MGP_129S1SvImJ_P0029076 Irf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029077.1 MGP_129S1SvImJ_G0018304.1 mouse_genomes_project 11 53188909 53191371 + MGP_129S1SvImJ_P0029077 Irf1 protein_coding protein_coding MGP_129S1SvImJ_T0029078.1 MGP_129S1SvImJ_G0018304.1 mouse_genomes_project 11 53188919 53192627 + MGP_129S1SvImJ_P0029078 Irf1 protein_coding protein_coding MGP_129S1SvImJ_T0029079.1 MGP_129S1SvImJ_G0018304.1 mouse_genomes_project 11 53188927 53195756 + MGP_129S1SvImJ_P0029079 Irf1 protein_coding protein_coding MGP_129S1SvImJ_T0029080.1 MGP_129S1SvImJ_G0018304.1 mouse_genomes_project 11 53188941 53192390 + MGP_129S1SvImJ_P0029080 Irf1 protein_coding protein_coding MGP_129S1SvImJ_T0029082.1 MGP_129S1SvImJ_G0018304.1 mouse_genomes_project 11 53191585 53192563 + Irf1 protein_coding retained_intron MGP_129S1SvImJ_T0028030.1 MGP_129S1SvImJ_G0018030.1 mouse_genomes_project 11 3809959 3828753 + MGP_129S1SvImJ_P0028030 Ramp3 protein_coding protein_coding MGP_129S1SvImJ_T0028031.1 MGP_129S1SvImJ_G0018030.1 mouse_genomes_project 11 3810003 3828750 + Ramp3 protein_coding processed_transcript MGP_129S1SvImJ_T0012795.1 MGP_129S1SvImJ_G0010884.1 mouse_genomes_project 11 121334675 121335123 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033038.1 MGP_129S1SvImJ_G0019295.1 mouse_genomes_project 11 109440755 109441064 + MGP_129S1SvImJ_P0033038 Gm10840 protein_coding protein_coding MGP_129S1SvImJ_T0009727.1 MGP_129S1SvImJ_G0007843.1 mouse_genomes_project 11 76310350 76310433 + Mir3971 miRNA miRNA MGP_129S1SvImJ_T0033850.1 MGP_129S1SvImJ_G0019460.1 mouse_genomes_project 11 122289824 122330363 + MGP_129S1SvImJ_P0033850 Pgs1 protein_coding protein_coding MGP_129S1SvImJ_T0033851.1 MGP_129S1SvImJ_G0019460.1 mouse_genomes_project 11 122290417 122330363 + MGP_129S1SvImJ_P0033851 Pgs1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033852.1 MGP_129S1SvImJ_G0019460.1 mouse_genomes_project 11 122305424 122330277 + MGP_129S1SvImJ_P0033852 Pgs1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033853.1 MGP_129S1SvImJ_G0019460.1 mouse_genomes_project 11 122316901 122330363 + Pgs1 protein_coding retained_intron MGP_129S1SvImJ_T0029603.1 MGP_129S1SvImJ_G0018449.1 mouse_genomes_project 11 61954621 62121029 + Specc1 protein_coding retained_intron MGP_129S1SvImJ_T0029604.1 MGP_129S1SvImJ_G0018449.1 mouse_genomes_project 11 61954621 62139553 + MGP_129S1SvImJ_P0029604 Specc1 protein_coding protein_coding MGP_129S1SvImJ_T0029605.1 MGP_129S1SvImJ_G0018449.1 mouse_genomes_project 11 61954637 62139999 + MGP_129S1SvImJ_P0029605 Specc1 protein_coding protein_coding MGP_129S1SvImJ_T0029606.1 MGP_129S1SvImJ_G0018449.1 mouse_genomes_project 11 61954668 62044145 + Specc1 protein_coding retained_intron MGP_129S1SvImJ_T0029607.1 MGP_129S1SvImJ_G0018449.1 mouse_genomes_project 11 61954673 62229223 + MGP_129S1SvImJ_P0029607 Specc1 protein_coding protein_coding MGP_129S1SvImJ_T0029608.1 MGP_129S1SvImJ_G0018449.1 mouse_genomes_project 11 61974297 62073707 + Specc1 protein_coding processed_transcript MGP_129S1SvImJ_T0029609.1 MGP_129S1SvImJ_G0018449.1 mouse_genomes_project 11 62004184 62139553 + MGP_129S1SvImJ_P0029609 Specc1 protein_coding protein_coding MGP_129S1SvImJ_T0029610.1 MGP_129S1SvImJ_G0018449.1 mouse_genomes_project 11 62017472 62143196 + MGP_129S1SvImJ_P0029610 Specc1 protein_coding protein_coding MGP_129S1SvImJ_T0029611.1 MGP_129S1SvImJ_G0018449.1 mouse_genomes_project 11 62017488 62229752 + MGP_129S1SvImJ_P0029611 Specc1 protein_coding protein_coding MGP_129S1SvImJ_T0029612.1 MGP_129S1SvImJ_G0018449.1 mouse_genomes_project 11 62027800 62232665 + MGP_129S1SvImJ_P0029612 Specc1 protein_coding protein_coding MGP_129S1SvImJ_T0029613.1 MGP_129S1SvImJ_G0018449.1 mouse_genomes_project 11 62027823 62234549 + MGP_129S1SvImJ_P0029613 Specc1 protein_coding protein_coding MGP_129S1SvImJ_T0029614.1 MGP_129S1SvImJ_G0018449.1 mouse_genomes_project 11 62076994 62234541 + MGP_129S1SvImJ_P0029614 Specc1 protein_coding protein_coding MGP_129S1SvImJ_T0029615.1 MGP_129S1SvImJ_G0018449.1 mouse_genomes_project 11 62076998 62229372 + MGP_129S1SvImJ_P0029615 Specc1 protein_coding protein_coding MGP_129S1SvImJ_T0029616.1 MGP_129S1SvImJ_G0018449.1 mouse_genomes_project 11 62077044 62078319 + Specc1 protein_coding retained_intron MGP_129S1SvImJ_T0029617.1 MGP_129S1SvImJ_G0018449.1 mouse_genomes_project 11 62077058 62139566 + MGP_129S1SvImJ_P0029617 Specc1 protein_coding protein_coding MGP_129S1SvImJ_T0029618.1 MGP_129S1SvImJ_G0018449.1 mouse_genomes_project 11 62077090 62140000 + MGP_129S1SvImJ_P0029618 Specc1 protein_coding protein_coding MGP_129S1SvImJ_T0029619.1 MGP_129S1SvImJ_G0018449.1 mouse_genomes_project 11 62077096 62234549 + MGP_129S1SvImJ_P0029619 Specc1 protein_coding protein_coding MGP_129S1SvImJ_T0006262.1 MGP_129S1SvImJ_G0005233.1 mouse_genomes_project 11 59778255 59778646 + 1810063I02Rik lincRNA lincRNA MGP_129S1SvImJ_T0102159.1 MGP_129S1SvImJ_G0039994.1 mouse_genomes_project 11 102412530 102412667 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0032718.1 MGP_129S1SvImJ_G0019230.1 mouse_genomes_project 11 105250770 105256474 - MGP_129S1SvImJ_P0032718 Atxn7l3 protein_coding protein_coding MGP_129S1SvImJ_T0032719.1 MGP_129S1SvImJ_G0019230.1 mouse_genomes_project 11 105250774 105254920 - Atxn7l3 protein_coding retained_intron MGP_129S1SvImJ_T0032720.1 MGP_129S1SvImJ_G0019230.1 mouse_genomes_project 11 105250774 105256787 - MGP_129S1SvImJ_P0032720 Atxn7l3 protein_coding protein_coding MGP_129S1SvImJ_T0032721.1 MGP_129S1SvImJ_G0019230.1 mouse_genomes_project 11 105250774 105256534 - MGP_129S1SvImJ_P0032721 Atxn7l3 protein_coding protein_coding MGP_129S1SvImJ_T0032722.1 MGP_129S1SvImJ_G0019230.1 mouse_genomes_project 11 105250774 105256462 - MGP_129S1SvImJ_P0032722 Atxn7l3 protein_coding protein_coding MGP_129S1SvImJ_T0032723.1 MGP_129S1SvImJ_G0019230.1 mouse_genomes_project 11 105250775 105256534 - MGP_129S1SvImJ_P0032723 Atxn7l3 protein_coding protein_coding MGP_129S1SvImJ_T0009757.1 MGP_129S1SvImJ_G0007873.1 mouse_genomes_project 11 100790948 100791005 + Mir5119 miRNA miRNA MGP_129S1SvImJ_T0030475.1 MGP_129S1SvImJ_G0018635.1 mouse_genomes_project 11 72920352 72928111 + MGP_129S1SvImJ_P0030475 Xaf1 protein_coding protein_coding MGP_129S1SvImJ_T0030476.1 MGP_129S1SvImJ_G0018635.1 mouse_genomes_project 11 72920353 72932522 + MGP_129S1SvImJ_P0030476 Xaf1 protein_coding protein_coding MGP_129S1SvImJ_T0030477.1 MGP_129S1SvImJ_G0018635.1 mouse_genomes_project 11 72920362 72931001 + MGP_129S1SvImJ_P0030477 Xaf1 protein_coding protein_coding MGP_129S1SvImJ_T0030478.1 MGP_129S1SvImJ_G0018635.1 mouse_genomes_project 11 72920386 72927791 + MGP_129S1SvImJ_P0030478 Xaf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030479.1 MGP_129S1SvImJ_G0018635.1 mouse_genomes_project 11 72920388 72927810 + Xaf1 protein_coding retained_intron MGP_129S1SvImJ_T0100472.1 MGP_129S1SvImJ_G0038539.1 mouse_genomes_project 11 2057575 2057672 + Gm24958 snoRNA snoRNA MGP_129S1SvImJ_T0012618.1 MGP_129S1SvImJ_G0010707.1 mouse_genomes_project 11 53340092 53341169 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031480.1 MGP_129S1SvImJ_G0018897.1 mouse_genomes_project 11 88607265 88650038 - MGP_129S1SvImJ_P0031480 Gdpd1 protein_coding protein_coding MGP_129S1SvImJ_T0033768.1 MGP_129S1SvImJ_G0019443.1 mouse_genomes_project 11 121015289 121038917 + MGP_129S1SvImJ_P0033768 Mfsd11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033769.1 MGP_129S1SvImJ_G0019443.1 mouse_genomes_project 11 121016144 121021967 + Mfsd11 protein_coding retained_intron MGP_129S1SvImJ_T0033770.1 MGP_129S1SvImJ_G0019443.1 mouse_genomes_project 11 121016324 121016909 + Mfsd11 protein_coding processed_transcript MGP_129S1SvImJ_T0033771.1 MGP_129S1SvImJ_G0019443.1 mouse_genomes_project 11 121016612 121038924 + MGP_129S1SvImJ_P0033771 Mfsd11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033772.1 MGP_129S1SvImJ_G0019443.1 mouse_genomes_project 11 121016629 121017107 + Mfsd11 protein_coding retained_intron MGP_129S1SvImJ_T0033773.1 MGP_129S1SvImJ_G0019443.1 mouse_genomes_project 11 121016670 121039662 + MGP_129S1SvImJ_P0033773 Mfsd11 protein_coding protein_coding MGP_129S1SvImJ_T0033774.1 MGP_129S1SvImJ_G0019443.1 mouse_genomes_project 11 121016679 121017567 + Mfsd11 protein_coding retained_intron MGP_129S1SvImJ_T0033775.1 MGP_129S1SvImJ_G0019443.1 mouse_genomes_project 11 121016745 121039662 + MGP_129S1SvImJ_P0033775 Mfsd11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033776.1 MGP_129S1SvImJ_G0019443.1 mouse_genomes_project 11 121016876 121038372 + MGP_129S1SvImJ_P0033776 Mfsd11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033777.1 MGP_129S1SvImJ_G0019443.1 mouse_genomes_project 11 121016928 121038150 + MGP_129S1SvImJ_P0033777 Mfsd11 protein_coding protein_coding MGP_129S1SvImJ_T0033778.1 MGP_129S1SvImJ_G0019443.1 mouse_genomes_project 11 121021996 121024754 + Mfsd11 protein_coding retained_intron MGP_129S1SvImJ_T0033779.1 MGP_129S1SvImJ_G0019443.1 mouse_genomes_project 11 121031477 121038042 + Mfsd11 protein_coding processed_transcript MGP_129S1SvImJ_T0009764.1 MGP_129S1SvImJ_G0007880.1 mouse_genomes_project 11 105375116 105375184 - Mir6930 miRNA miRNA MGP_129S1SvImJ_T0027647.1 MGP_129S1SvImJ_G0017952.1 mouse_genomes_project 11 47514 91580 + MGP_129S1SvImJ_P0027647 Eif4enif1 protein_coding protein_coding MGP_129S1SvImJ_T0027648.1 MGP_129S1SvImJ_G0017952.1 mouse_genomes_project 11 47735 68388 + Eif4enif1 protein_coding retained_intron MGP_129S1SvImJ_T0027649.1 MGP_129S1SvImJ_G0017952.1 mouse_genomes_project 11 47735 91587 + MGP_129S1SvImJ_P0027649 Eif4enif1 protein_coding protein_coding MGP_129S1SvImJ_T0027650.1 MGP_129S1SvImJ_G0017952.1 mouse_genomes_project 11 47741 58480 + Eif4enif1 protein_coding retained_intron MGP_129S1SvImJ_T0027651.1 MGP_129S1SvImJ_G0017952.1 mouse_genomes_project 11 47786 66823 + MGP_129S1SvImJ_P0027651 Eif4enif1 protein_coding protein_coding MGP_129S1SvImJ_T0027652.1 MGP_129S1SvImJ_G0017952.1 mouse_genomes_project 11 48047 91584 + MGP_129S1SvImJ_P0027652 Eif4enif1 protein_coding protein_coding MGP_129S1SvImJ_T0027653.1 MGP_129S1SvImJ_G0017952.1 mouse_genomes_project 11 48073 91586 + MGP_129S1SvImJ_P0027653 Eif4enif1 protein_coding protein_coding MGP_129S1SvImJ_T0027654.1 MGP_129S1SvImJ_G0017952.1 mouse_genomes_project 11 48682 91585 + MGP_129S1SvImJ_P0027654 Eif4enif1 protein_coding protein_coding MGP_129S1SvImJ_T0027655.1 MGP_129S1SvImJ_G0017952.1 mouse_genomes_project 11 73824 77140 + Eif4enif1 protein_coding retained_intron MGP_129S1SvImJ_T0027656.1 MGP_129S1SvImJ_G0017952.1 mouse_genomes_project 11 73824 77103 + Eif4enif1 protein_coding retained_intron MGP_129S1SvImJ_T0027657.1 MGP_129S1SvImJ_G0017952.1 mouse_genomes_project 11 73870 86459 + MGP_129S1SvImJ_P0027657 Eif4enif1 protein_coding protein_coding MGP_129S1SvImJ_T0027658.1 MGP_129S1SvImJ_G0017952.1 mouse_genomes_project 11 81204 87975 + Eif4enif1 protein_coding retained_intron MGP_129S1SvImJ_T0027659.1 MGP_129S1SvImJ_G0017952.1 mouse_genomes_project 11 82530 86441 + Eif4enif1 protein_coding retained_intron MGP_129S1SvImJ_T0031750.1 MGP_129S1SvImJ_G0018960.1 mouse_genomes_project 11 96643491 96652922 - Rsad1 protein_coding processed_transcript MGP_129S1SvImJ_T0031751.1 MGP_129S1SvImJ_G0018960.1 mouse_genomes_project 11 96643491 96652866 - MGP_129S1SvImJ_P0031751 Rsad1 protein_coding protein_coding MGP_129S1SvImJ_T0031752.1 MGP_129S1SvImJ_G0018960.1 mouse_genomes_project 11 96648314 96652459 - Rsad1 protein_coding processed_transcript MGP_129S1SvImJ_T0031753.1 MGP_129S1SvImJ_G0018960.1 mouse_genomes_project 11 96648379 96652269 - Rsad1 protein_coding processed_transcript MGP_129S1SvImJ_T0032022.1 MGP_129S1SvImJ_G0019033.1 mouse_genomes_project 11 99942869 100018916 - MGP_129S1SvImJ_P0032022 Srcin1 protein_coding protein_coding MGP_129S1SvImJ_T0032023.1 MGP_129S1SvImJ_G0019033.1 mouse_genomes_project 11 99951026 100017754 - MGP_129S1SvImJ_P0032023 Srcin1 protein_coding protein_coding MGP_129S1SvImJ_T0032024.1 MGP_129S1SvImJ_G0019033.1 mouse_genomes_project 11 99951100 100017620 - MGP_129S1SvImJ_P0032024 Srcin1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0032025.1 MGP_129S1SvImJ_G0019033.1 mouse_genomes_project 11 99955715 100017645 - MGP_129S1SvImJ_P0032025 Srcin1 protein_coding protein_coding MGP_129S1SvImJ_T0032026.1 MGP_129S1SvImJ_G0019033.1 mouse_genomes_project 11 99972923 100017630 - MGP_129S1SvImJ_P0032026 Srcin1 protein_coding protein_coding MGP_129S1SvImJ_T0032027.1 MGP_129S1SvImJ_G0019033.1 mouse_genomes_project 11 99989944 100018927 - Srcin1 protein_coding processed_transcript MGP_129S1SvImJ_T0031274.1 MGP_129S1SvImJ_G0018846.1 mouse_genomes_project 11 84730449 84740118 + MGP_129S1SvImJ_P0031274 Rasl10b protein_coding protein_coding MGP_129S1SvImJ_T0031275.1 MGP_129S1SvImJ_G0018846.1 mouse_genomes_project 11 84730987 84742323 + MGP_129S1SvImJ_P0031275 Rasl10b protein_coding protein_coding MGP_129S1SvImJ_T0031276.1 MGP_129S1SvImJ_G0018846.1 mouse_genomes_project 11 84730987 84742321 + MGP_129S1SvImJ_P0031276 Rasl10b protein_coding protein_coding MGP_129S1SvImJ_T0031277.1 MGP_129S1SvImJ_G0018846.1 mouse_genomes_project 11 84731371 84742322 + MGP_129S1SvImJ_P0031277 Rasl10b protein_coding protein_coding MGP_129S1SvImJ_T0012647.1 MGP_129S1SvImJ_G0010736.1 mouse_genomes_project 11 60328696 60329457 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003173.1 MGP_129S1SvImJ_G0002948.1 mouse_genomes_project 11 49909794 49915257 - Gm12200 antisense antisense MGP_129S1SvImJ_T0033135.1 MGP_129S1SvImJ_G0019316.1 mouse_genomes_project 11 110336238 110351582 - MGP_129S1SvImJ_P0033135 Gm10184 protein_coding protein_coding MGP_129S1SvImJ_T0033136.1 MGP_129S1SvImJ_G0019316.1 mouse_genomes_project 11 110336242 110338741 - MGP_129S1SvImJ_P0033136 Gm10184 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0033137.1 MGP_129S1SvImJ_G0019316.1 mouse_genomes_project 11 110340047 110346453 - MGP_129S1SvImJ_P0033137 Gm10184 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0033138.1 MGP_129S1SvImJ_G0019316.1 mouse_genomes_project 11 110346027 110351410 - MGP_129S1SvImJ_P0033138 Gm10184 protein_coding protein_coding MGP_129S1SvImJ_T0006325.1 MGP_129S1SvImJ_G0005279.1 mouse_genomes_project 11 90455112 90459299 + C030037D09Rik lincRNA lincRNA MGP_129S1SvImJ_T0006326.1 MGP_129S1SvImJ_G0005279.1 mouse_genomes_project 11 90455271 90465973 + C030037D09Rik lincRNA lincRNA MGP_129S1SvImJ_T0006327.1 MGP_129S1SvImJ_G0005279.1 mouse_genomes_project 11 90456956 90460872 + C030037D09Rik lincRNA lincRNA MGP_129S1SvImJ_T0033742.1 MGP_129S1SvImJ_G0019438.1 mouse_genomes_project 11 120920804 120940175 - MGP_129S1SvImJ_P0033742 protein_coding protein_coding MGP_129S1SvImJ_T0099284.1 MGP_129S1SvImJ_G0037351.1 mouse_genomes_project 11 104255339 104255520 - Gm25475 snRNA snRNA MGP_129S1SvImJ_T0029002.1 MGP_129S1SvImJ_G0018283.1 mouse_genomes_project 11 51558111 51588296 - MGP_129S1SvImJ_P0029002 Tcf7 protein_coding protein_coding MGP_129S1SvImJ_T0029003.1 MGP_129S1SvImJ_G0018283.1 mouse_genomes_project 11 51558976 51588739 - MGP_129S1SvImJ_P0029003 Tcf7 protein_coding protein_coding MGP_129S1SvImJ_T0100487.1 MGP_129S1SvImJ_G0038554.1 mouse_genomes_project 11 23053119 23053247 - Gm24255 snoRNA snoRNA MGP_129S1SvImJ_T0033303.1 MGP_129S1SvImJ_G0019353.1 mouse_genomes_project 11 117528614 117540645 - MGP_129S1SvImJ_P0033303 Cpsf4l protein_coding protein_coding MGP_129S1SvImJ_T0033304.1 MGP_129S1SvImJ_G0019353.1 mouse_genomes_project 11 117528614 117540154 - MGP_129S1SvImJ_P0033304 Cpsf4l protein_coding protein_coding MGP_129S1SvImJ_T0033305.1 MGP_129S1SvImJ_G0019353.1 mouse_genomes_project 11 117528614 117539595 - MGP_129S1SvImJ_P0033305 Cpsf4l protein_coding protein_coding MGP_129S1SvImJ_T0033306.1 MGP_129S1SvImJ_G0019353.1 mouse_genomes_project 11 117528614 117540148 - MGP_129S1SvImJ_P0033306 Cpsf4l protein_coding protein_coding MGP_129S1SvImJ_T0033307.1 MGP_129S1SvImJ_G0019353.1 mouse_genomes_project 11 117533034 117540152 - Cpsf4l protein_coding retained_intron MGP_129S1SvImJ_T0030562.1 MGP_129S1SvImJ_G0018658.1 mouse_genomes_project 11 73916836 73944372 + MGP_129S1SvImJ_P0030562 Trpv1 protein_coding protein_coding MGP_129S1SvImJ_T0030563.1 MGP_129S1SvImJ_G0018658.1 mouse_genomes_project 11 73920787 73943640 + MGP_129S1SvImJ_P0030563 Trpv1 protein_coding protein_coding MGP_129S1SvImJ_T0030564.1 MGP_129S1SvImJ_G0018658.1 mouse_genomes_project 11 73922566 73944375 + MGP_129S1SvImJ_P0030564 Trpv1 protein_coding protein_coding MGP_129S1SvImJ_T0030565.1 MGP_129S1SvImJ_G0018658.1 mouse_genomes_project 11 73922830 73937360 + MGP_129S1SvImJ_P0030565 Trpv1 protein_coding protein_coding MGP_129S1SvImJ_T0030566.1 MGP_129S1SvImJ_G0018658.1 mouse_genomes_project 11 73934846 73936760 + Trpv1 protein_coding processed_transcript MGP_129S1SvImJ_T0031403.1 MGP_129S1SvImJ_G0018881.1 mouse_genomes_project 11 86806787 86849405 + MGP_129S1SvImJ_P0031403 Ppm1d protein_coding protein_coding MGP_129S1SvImJ_T0031404.1 MGP_129S1SvImJ_G0018881.1 mouse_genomes_project 11 86807707 86839566 + MGP_129S1SvImJ_P0031404 Ppm1d protein_coding protein_coding MGP_129S1SvImJ_T0006211.1 MGP_129S1SvImJ_G0005190.1 mouse_genomes_project 11 22285715 22371450 + 4933430M04Rik lincRNA lincRNA MGP_129S1SvImJ_T0006199.1 MGP_129S1SvImJ_G0005178.1 mouse_genomes_project 11 18395652 18396091 - Gm12037 lincRNA lincRNA MGP_129S1SvImJ_T0029161.1 MGP_129S1SvImJ_G0018322.1 mouse_genomes_project 11 54402138 54450713 - MGP_129S1SvImJ_P0029161 Tnip1 protein_coding protein_coding MGP_129S1SvImJ_T0029162.1 MGP_129S1SvImJ_G0018322.1 mouse_genomes_project 11 54402140 54450695 - Tnip1 protein_coding processed_transcript MGP_129S1SvImJ_T0029163.1 MGP_129S1SvImJ_G0018322.1 mouse_genomes_project 11 54402140 54457501 - MGP_129S1SvImJ_P0029163 Tnip1 protein_coding protein_coding MGP_129S1SvImJ_T0029164.1 MGP_129S1SvImJ_G0018322.1 mouse_genomes_project 11 54402140 54457497 - MGP_129S1SvImJ_P0029164 Tnip1 protein_coding protein_coding MGP_129S1SvImJ_T0029165.1 MGP_129S1SvImJ_G0018322.1 mouse_genomes_project 11 54402140 54457502 - MGP_129S1SvImJ_P0029165 Tnip1 protein_coding protein_coding MGP_129S1SvImJ_T0029166.1 MGP_129S1SvImJ_G0018322.1 mouse_genomes_project 11 54402140 54457495 - MGP_129S1SvImJ_P0029166 Tnip1 protein_coding protein_coding MGP_129S1SvImJ_T0029167.1 MGP_129S1SvImJ_G0018322.1 mouse_genomes_project 11 54402142 54457494 - MGP_129S1SvImJ_P0029167 Tnip1 protein_coding protein_coding MGP_129S1SvImJ_T0029168.1 MGP_129S1SvImJ_G0018322.1 mouse_genomes_project 11 54409965 54412429 - Tnip1 protein_coding retained_intron MGP_129S1SvImJ_T0029169.1 MGP_129S1SvImJ_G0018322.1 mouse_genomes_project 11 54418056 54450713 - MGP_129S1SvImJ_P0029169 Tnip1 protein_coding protein_coding MGP_129S1SvImJ_T0029170.1 MGP_129S1SvImJ_G0018322.1 mouse_genomes_project 11 54425381 54450638 - MGP_129S1SvImJ_P0029170 Tnip1 protein_coding protein_coding MGP_129S1SvImJ_T0029171.1 MGP_129S1SvImJ_G0018322.1 mouse_genomes_project 11 54434199 54450678 - Tnip1 protein_coding processed_transcript MGP_129S1SvImJ_T0029172.1 MGP_129S1SvImJ_G0018322.1 mouse_genomes_project 11 54434253 54457494 - Tnip1 protein_coding processed_transcript MGP_129S1SvImJ_T0032250.1 MGP_129S1SvImJ_G0019085.1 mouse_genomes_project 11 101882231 101893538 - MGP_129S1SvImJ_P0032250 Krt222 protein_coding protein_coding MGP_129S1SvImJ_T0032251.1 MGP_129S1SvImJ_G0019085.1 mouse_genomes_project 11 101883360 101893556 - MGP_129S1SvImJ_P0032251 Krt222 protein_coding protein_coding MGP_129S1SvImJ_T0032252.1 MGP_129S1SvImJ_G0019085.1 mouse_genomes_project 11 101884413 101888346 - Krt222 protein_coding processed_transcript MGP_129S1SvImJ_T0003142.1 MGP_129S1SvImJ_G0002922.1 mouse_genomes_project 11 9628808 9652700 + Gm12002 antisense antisense MGP_129S1SvImJ_T0003143.1 MGP_129S1SvImJ_G0002922.1 mouse_genomes_project 11 9628827 9651400 + Gm12002 antisense antisense MGP_129S1SvImJ_T0003144.1 MGP_129S1SvImJ_G0002922.1 mouse_genomes_project 11 9636575 9667862 + Gm12002 antisense antisense MGP_129S1SvImJ_T0012641.1 MGP_129S1SvImJ_G0010730.1 mouse_genomes_project 11 58735834 58736299 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028741.1 MGP_129S1SvImJ_G0018209.1 mouse_genomes_project 11 47967937 47971405 - protein_coding processed_transcript MGP_129S1SvImJ_T0031117.1 MGP_129S1SvImJ_G0018802.1 mouse_genomes_project 11 81056694 81090568 - MGP_129S1SvImJ_P0031117 Utp6 protein_coding protein_coding MGP_129S1SvImJ_T0031118.1 MGP_129S1SvImJ_G0018802.1 mouse_genomes_project 11 81058326 81090579 - MGP_129S1SvImJ_P0031118 Utp6 protein_coding protein_coding MGP_129S1SvImJ_T0031119.1 MGP_129S1SvImJ_G0018802.1 mouse_genomes_project 11 81060223 81068178 - Utp6 protein_coding retained_intron MGP_129S1SvImJ_T0031120.1 MGP_129S1SvImJ_G0018802.1 mouse_genomes_project 11 81086785 81090556 - Utp6 protein_coding retained_intron MGP_129S1SvImJ_T0029510.1 MGP_129S1SvImJ_G0018432.1 mouse_genomes_project 11 61070706 61097078 + MGP_129S1SvImJ_P0029510 Tnfrsf13b protein_coding protein_coding MGP_129S1SvImJ_T0029511.1 MGP_129S1SvImJ_G0018432.1 mouse_genomes_project 11 61070709 61094577 + MGP_129S1SvImJ_P0029511 Tnfrsf13b protein_coding protein_coding MGP_129S1SvImJ_T0029512.1 MGP_129S1SvImJ_G0018432.1 mouse_genomes_project 11 61070740 61094620 + MGP_129S1SvImJ_P0029512 Tnfrsf13b protein_coding protein_coding MGP_129S1SvImJ_T0029513.1 MGP_129S1SvImJ_G0018432.1 mouse_genomes_project 11 61088556 61095348 + MGP_129S1SvImJ_P0029513 Tnfrsf13b protein_coding protein_coding MGP_129S1SvImJ_T0029514.1 MGP_129S1SvImJ_G0018432.1 mouse_genomes_project 11 61090190 61095639 + Tnfrsf13b protein_coding processed_transcript MGP_129S1SvImJ_T0029515.1 MGP_129S1SvImJ_G0018432.1 mouse_genomes_project 11 61090228 61095512 + Tnfrsf13b protein_coding processed_transcript MGP_129S1SvImJ_T0029516.1 MGP_129S1SvImJ_G0018432.1 mouse_genomes_project 11 61090394 61095465 + Tnfrsf13b protein_coding processed_transcript MGP_129S1SvImJ_T0011332.1 MGP_129S1SvImJ_G0009448.1 mouse_genomes_project 11 98499932 98500068 - Gm27605 misc_RNA misc_RNA MGP_129S1SvImJ_T0032305.1 MGP_129S1SvImJ_G0019135.1 mouse_genomes_project 11 102769178 102775409 - MGP_129S1SvImJ_P0032305 Krt33b protein_coding protein_coding MGP_129S1SvImJ_T0032102.1 MGP_129S1SvImJ_G0019051.1 mouse_genomes_project 11 100670440 100713319 - MGP_129S1SvImJ_P0032102 Med1 protein_coding protein_coding MGP_129S1SvImJ_T0032103.1 MGP_129S1SvImJ_G0019051.1 mouse_genomes_project 11 100670443 100713496 - MGP_129S1SvImJ_P0032103 Med1 protein_coding protein_coding MGP_129S1SvImJ_T0032104.1 MGP_129S1SvImJ_G0019051.1 mouse_genomes_project 11 100671300 100682273 - Med1 protein_coding processed_transcript MGP_129S1SvImJ_T0032105.1 MGP_129S1SvImJ_G0019051.1 mouse_genomes_project 11 100676031 100679305 - Med1 protein_coding processed_transcript MGP_129S1SvImJ_T0032106.1 MGP_129S1SvImJ_G0019051.1 mouse_genomes_project 11 100687678 100698025 - Med1 protein_coding processed_transcript MGP_129S1SvImJ_T0032107.1 MGP_129S1SvImJ_G0019051.1 mouse_genomes_project 11 100688225 100713512 - Med1 protein_coding processed_transcript MGP_129S1SvImJ_T0012729.1 MGP_129S1SvImJ_G0010818.1 mouse_genomes_project 11 94718198 94718799 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029279.1 MGP_129S1SvImJ_G0018363.1 mouse_genomes_project 11 58339676 58340798 + MGP_129S1SvImJ_P0029279 Olfr324 protein_coding protein_coding MGP_129S1SvImJ_T0028881.1 MGP_129S1SvImJ_G0018251.1 mouse_genomes_project 11 49786737 49999665 + MGP_129S1SvImJ_P0028881 Adamts2 protein_coding protein_coding MGP_129S1SvImJ_T0028882.1 MGP_129S1SvImJ_G0018251.1 mouse_genomes_project 11 49787459 49988803 + MGP_129S1SvImJ_P0028882 Adamts2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0028883.1 MGP_129S1SvImJ_G0018251.1 mouse_genomes_project 11 49967595 49968432 + Adamts2 protein_coding processed_transcript MGP_129S1SvImJ_T0028884.1 MGP_129S1SvImJ_G0018251.1 mouse_genomes_project 11 49973079 49974108 + Adamts2 protein_coding processed_transcript MGP_129S1SvImJ_T0028885.1 MGP_129S1SvImJ_G0018251.1 mouse_genomes_project 11 49987584 49990514 + Adamts2 protein_coding processed_transcript MGP_129S1SvImJ_T0031652.1 MGP_129S1SvImJ_G0018942.1 mouse_genomes_project 11 93447105 93449349 - MGP_129S1SvImJ_P0031652 Kif2b protein_coding protein_coding MGP_129S1SvImJ_T0030769.1 MGP_129S1SvImJ_G0018723.1 mouse_genomes_project 11 76545842 76574930 - MGP_129S1SvImJ_P0030769 Doc2b protein_coding protein_coding MGP_129S1SvImJ_T0006260.1 MGP_129S1SvImJ_G0005231.1 mouse_genomes_project 11 58642783 58643926 + Gm12259 lincRNA lincRNA MGP_129S1SvImJ_T0012766.1 MGP_129S1SvImJ_G0010855.1 mouse_genomes_project 11 108127756 108128345 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034188.1 MGP_129S1SvImJ_G0019524.1 mouse_genomes_project 11 125206377 125208877 + MGP_129S1SvImJ_P0034188 Rac3 protein_coding protein_coding MGP_129S1SvImJ_T0034189.1 MGP_129S1SvImJ_G0019524.1 mouse_genomes_project 11 125206480 125208514 + MGP_129S1SvImJ_P0034189 Rac3 protein_coding protein_coding MGP_129S1SvImJ_T0034190.1 MGP_129S1SvImJ_G0019524.1 mouse_genomes_project 11 125206921 125208473 + Rac3 protein_coding processed_transcript MGP_129S1SvImJ_T0009697.1 MGP_129S1SvImJ_G0007813.1 mouse_genomes_project 11 60069305 60069385 - Mir6921 miRNA miRNA MGP_129S1SvImJ_T0033983.1 MGP_129S1SvImJ_G0019487.1 mouse_genomes_project 11 124370037 124432939 + MGP_129S1SvImJ_P0033983 Baiap2 protein_coding protein_coding MGP_129S1SvImJ_T0033984.1 MGP_129S1SvImJ_G0019487.1 mouse_genomes_project 11 124370037 124437100 + MGP_129S1SvImJ_P0033984 Baiap2 protein_coding protein_coding MGP_129S1SvImJ_T0033985.1 MGP_129S1SvImJ_G0019487.1 mouse_genomes_project 11 124370037 124432939 + MGP_129S1SvImJ_P0033985 Baiap2 protein_coding protein_coding MGP_129S1SvImJ_T0033986.1 MGP_129S1SvImJ_G0019487.1 mouse_genomes_project 11 124370037 124432939 + MGP_129S1SvImJ_P0033986 Baiap2 protein_coding protein_coding MGP_129S1SvImJ_T0033987.1 MGP_129S1SvImJ_G0019487.1 mouse_genomes_project 11 124370037 124437100 + MGP_129S1SvImJ_P0033987 Baiap2 protein_coding protein_coding MGP_129S1SvImJ_T0033988.1 MGP_129S1SvImJ_G0019487.1 mouse_genomes_project 11 124370390 124387807 + Baiap2 protein_coding processed_transcript MGP_129S1SvImJ_T0033989.1 MGP_129S1SvImJ_G0019487.1 mouse_genomes_project 11 124370746 124411737 + Baiap2 protein_coding processed_transcript MGP_129S1SvImJ_T0033990.1 MGP_129S1SvImJ_G0019487.1 mouse_genomes_project 11 124387295 124387662 + Baiap2 protein_coding processed_transcript MGP_129S1SvImJ_T0033991.1 MGP_129S1SvImJ_G0019487.1 mouse_genomes_project 11 124427988 124432517 + Baiap2 protein_coding processed_transcript MGP_129S1SvImJ_T0032271.1 MGP_129S1SvImJ_G0019101.1 mouse_genomes_project 11 102255852 102256893 - MGP_129S1SvImJ_P0032271 Krtap1-5 protein_coding protein_coding MGP_129S1SvImJ_T0031960.1 MGP_129S1SvImJ_G0019017.1 mouse_genomes_project 11 99309826 99317260 - Pnpo protein_coding processed_transcript MGP_129S1SvImJ_T0031961.1 MGP_129S1SvImJ_G0019017.1 mouse_genomes_project 11 99309828 99317349 - MGP_129S1SvImJ_P0031961 Pnpo protein_coding protein_coding MGP_129S1SvImJ_T0027811.1 MGP_129S1SvImJ_G0017983.1 mouse_genomes_project 11 1447092 1564255 - MGP_129S1SvImJ_P0027811 Mtmr3 protein_coding protein_coding MGP_129S1SvImJ_T0027812.1 MGP_129S1SvImJ_G0017983.1 mouse_genomes_project 11 1447099 1454591 - Mtmr3 protein_coding processed_transcript MGP_129S1SvImJ_T0027813.1 MGP_129S1SvImJ_G0017983.1 mouse_genomes_project 11 1447099 1513607 - MGP_129S1SvImJ_P0027813 Mtmr3 protein_coding protein_coding MGP_129S1SvImJ_T0027814.1 MGP_129S1SvImJ_G0017983.1 mouse_genomes_project 11 1447114 1495771 - MGP_129S1SvImJ_P0027814 Mtmr3 protein_coding protein_coding MGP_129S1SvImJ_T0027815.1 MGP_129S1SvImJ_G0017983.1 mouse_genomes_project 11 1448783 1564303 - MGP_129S1SvImJ_P0027815 Mtmr3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027816.1 MGP_129S1SvImJ_G0017983.1 mouse_genomes_project 11 1448976 1495771 - MGP_129S1SvImJ_P0027816 Mtmr3 protein_coding protein_coding MGP_129S1SvImJ_T0027817.1 MGP_129S1SvImJ_G0017983.1 mouse_genomes_project 11 1458031 1459543 - Mtmr3 protein_coding processed_transcript MGP_129S1SvImJ_T0033274.1 MGP_129S1SvImJ_G0019346.1 mouse_genomes_project 11 114636041 114696795 + MGP_129S1SvImJ_P0033274 Kcnj16 protein_coding protein_coding MGP_129S1SvImJ_T0033275.1 MGP_129S1SvImJ_G0019346.1 mouse_genomes_project 11 114636041 114696798 + MGP_129S1SvImJ_P0033275 Kcnj16 protein_coding protein_coding MGP_129S1SvImJ_T0033276.1 MGP_129S1SvImJ_G0019346.1 mouse_genomes_project 11 114636072 114693670 + MGP_129S1SvImJ_P0033276 Kcnj16 protein_coding protein_coding MGP_129S1SvImJ_T0033277.1 MGP_129S1SvImJ_G0019346.1 mouse_genomes_project 11 114666372 114696798 + MGP_129S1SvImJ_P0033277 Kcnj16 protein_coding protein_coding MGP_129S1SvImJ_T0033278.1 MGP_129S1SvImJ_G0019346.1 mouse_genomes_project 11 114692707 114693559 + MGP_129S1SvImJ_P0033278 Kcnj16 protein_coding protein_coding MGP_129S1SvImJ_T0033279.1 MGP_129S1SvImJ_G0019346.1 mouse_genomes_project 11 114692707 114696795 + MGP_129S1SvImJ_P0033279 Kcnj16 protein_coding protein_coding MGP_129S1SvImJ_T0033244.1 MGP_129S1SvImJ_G0019339.1 mouse_genomes_project 11 113366351 113408798 - MGP_129S1SvImJ_P0033244 1700012B07Rik protein_coding protein_coding MGP_129S1SvImJ_T0033245.1 MGP_129S1SvImJ_G0019339.1 mouse_genomes_project 11 113370241 113408774 - MGP_129S1SvImJ_P0033245 1700012B07Rik protein_coding protein_coding MGP_129S1SvImJ_T0033246.1 MGP_129S1SvImJ_G0019339.1 mouse_genomes_project 11 113370282 113393741 - MGP_129S1SvImJ_P0033246 1700012B07Rik protein_coding protein_coding MGP_129S1SvImJ_T0030966.1 MGP_129S1SvImJ_G0018764.1 mouse_genomes_project 11 79140168 79147259 - Traf4 protein_coding retained_intron MGP_129S1SvImJ_T0030967.1 MGP_129S1SvImJ_G0018764.1 mouse_genomes_project 11 79141069 79147259 - MGP_129S1SvImJ_P0030967 Traf4 protein_coding protein_coding MGP_129S1SvImJ_T0030968.1 MGP_129S1SvImJ_G0018764.1 mouse_genomes_project 11 79142462 79147186 - Traf4 protein_coding retained_intron MGP_129S1SvImJ_T0028758.1 MGP_129S1SvImJ_G0018219.1 mouse_genomes_project 11 48200369 48207767 + MGP_129S1SvImJ_P0028758 Olfr1395 protein_coding protein_coding MGP_129S1SvImJ_T0028759.1 MGP_129S1SvImJ_G0018219.1 mouse_genomes_project 11 48206813 48207767 + MGP_129S1SvImJ_P0028759 Olfr1395 protein_coding protein_coding MGP_129S1SvImJ_T0030073.1 MGP_129S1SvImJ_G0018556.1 mouse_genomes_project 11 70283423 70285446 - MGP_129S1SvImJ_P0030073 Tmem102 protein_coding protein_coding MGP_129S1SvImJ_T0012771.1 MGP_129S1SvImJ_G0010860.1 mouse_genomes_project 11 109135672 109136681 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003212.1 MGP_129S1SvImJ_G0002981.1 mouse_genomes_project 11 62567770 62568647 + Gm12949 antisense antisense MGP_129S1SvImJ_T0034030.1 MGP_129S1SvImJ_G0019493.1 mouse_genomes_project 11 124682000 124745113 + MGP_129S1SvImJ_P0034030 Bahcc1 protein_coding protein_coding MGP_129S1SvImJ_T0034031.1 MGP_129S1SvImJ_G0019493.1 mouse_genomes_project 11 124682000 124745099 + MGP_129S1SvImJ_P0034031 Bahcc1 protein_coding protein_coding MGP_129S1SvImJ_T0034032.1 MGP_129S1SvImJ_G0019493.1 mouse_genomes_project 11 124685498 124686338 + Bahcc1 protein_coding processed_transcript MGP_129S1SvImJ_T0034033.1 MGP_129S1SvImJ_G0019493.1 mouse_genomes_project 11 124685752 124745099 + MGP_129S1SvImJ_P0034033 Bahcc1 protein_coding protein_coding MGP_129S1SvImJ_T0034034.1 MGP_129S1SvImJ_G0019493.1 mouse_genomes_project 11 124738822 124744984 + Bahcc1 protein_coding processed_transcript MGP_129S1SvImJ_T0009726.1 MGP_129S1SvImJ_G0007842.1 mouse_genomes_project 11 76210791 76210886 + Mir22 miRNA miRNA MGP_129S1SvImJ_T0102141.1 MGP_129S1SvImJ_G0039976.1 mouse_genomes_project 11 74412115 74412674 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0032364.1 MGP_129S1SvImJ_G0019156.1 mouse_genomes_project 11 103203364 103218382 + MGP_129S1SvImJ_P0032364 Klhl10 protein_coding protein_coding MGP_129S1SvImJ_T0032365.1 MGP_129S1SvImJ_G0019156.1 mouse_genomes_project 11 103203374 103207472 + MGP_129S1SvImJ_P0032365 Klhl10 protein_coding protein_coding MGP_129S1SvImJ_T0012523.1 MGP_129S1SvImJ_G0010612.1 mouse_genomes_project 11 17634390 17634613 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012759.1 MGP_129S1SvImJ_G0010848.1 mouse_genomes_project 11 105664406 105665204 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028549.1 MGP_129S1SvImJ_G0018157.1 mouse_genomes_project 11 34219500 34245642 - MGP_129S1SvImJ_P0028549 Rars protein_coding unknown_likely_coding MGP_129S1SvImJ_T0028550.1 MGP_129S1SvImJ_G0018157.1 mouse_genomes_project 11 34219506 34249223 - MGP_129S1SvImJ_P0028550 Rars protein_coding protein_coding MGP_129S1SvImJ_T0028551.1 MGP_129S1SvImJ_G0018157.1 mouse_genomes_project 11 34226793 34231235 - Rars protein_coding processed_transcript MGP_129S1SvImJ_T0028552.1 MGP_129S1SvImJ_G0018157.1 mouse_genomes_project 11 34228553 34232629 - Rars protein_coding retained_intron MGP_129S1SvImJ_T0028553.1 MGP_129S1SvImJ_G0018157.1 mouse_genomes_project 11 34232262 34236259 - Rars protein_coding retained_intron MGP_129S1SvImJ_T0028554.1 MGP_129S1SvImJ_G0018157.1 mouse_genomes_project 11 34237620 34249178 - Rars protein_coding processed_transcript MGP_129S1SvImJ_T0031944.1 MGP_129S1SvImJ_G0019015.1 mouse_genomes_project 11 99273884 99283954 - MGP_129S1SvImJ_P0031944 Cdk5rap3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031945.1 MGP_129S1SvImJ_G0019015.1 mouse_genomes_project 11 99273884 99283954 - MGP_129S1SvImJ_P0031945 Cdk5rap3 protein_coding protein_coding MGP_129S1SvImJ_T0031946.1 MGP_129S1SvImJ_G0019015.1 mouse_genomes_project 11 99274274 99275217 - Cdk5rap3 protein_coding retained_intron MGP_129S1SvImJ_T0031947.1 MGP_129S1SvImJ_G0019015.1 mouse_genomes_project 11 99277923 99279337 - Cdk5rap3 protein_coding retained_intron MGP_129S1SvImJ_T0031948.1 MGP_129S1SvImJ_G0019015.1 mouse_genomes_project 11 99278412 99283850 - MGP_129S1SvImJ_P0031948 Cdk5rap3 protein_coding protein_coding MGP_129S1SvImJ_T0031949.1 MGP_129S1SvImJ_G0019015.1 mouse_genomes_project 11 99278429 99283565 - MGP_129S1SvImJ_P0031949 Cdk5rap3 protein_coding protein_coding MGP_129S1SvImJ_T0031950.1 MGP_129S1SvImJ_G0019015.1 mouse_genomes_project 11 99278451 99283887 - MGP_129S1SvImJ_P0031950 Cdk5rap3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031951.1 MGP_129S1SvImJ_G0019015.1 mouse_genomes_project 11 99278684 99283824 - MGP_129S1SvImJ_P0031951 Cdk5rap3 protein_coding protein_coding MGP_129S1SvImJ_T0031952.1 MGP_129S1SvImJ_G0019015.1 mouse_genomes_project 11 99278705 99283872 - MGP_129S1SvImJ_P0031952 Cdk5rap3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031953.1 MGP_129S1SvImJ_G0019015.1 mouse_genomes_project 11 99278815 99283872 - MGP_129S1SvImJ_P0031953 Cdk5rap3 protein_coding protein_coding MGP_129S1SvImJ_T0031954.1 MGP_129S1SvImJ_G0019015.1 mouse_genomes_project 11 99279152 99283825 - Cdk5rap3 protein_coding retained_intron MGP_129S1SvImJ_T0032554.1 MGP_129S1SvImJ_G0019198.1 mouse_genomes_project 11 104264637 104282286 - MGP_129S1SvImJ_P0032554 Gm27029 protein_coding protein_coding MGP_129S1SvImJ_T0032556.1 MGP_129S1SvImJ_G0019198.1 mouse_genomes_project 11 104264812 104282563 - MGP_129S1SvImJ_P0032556 Gm27029 protein_coding protein_coding MGP_129S1SvImJ_T0032894.1 MGP_129S1SvImJ_G0019260.1 mouse_genomes_project 11 106265498 106275804 - MGP_129S1SvImJ_P0032894 Spata32 protein_coding protein_coding MGP_129S1SvImJ_T0099260.1 MGP_129S1SvImJ_G0037327.1 mouse_genomes_project 11 80705951 80706055 + Gm23293 snRNA snRNA MGP_129S1SvImJ_T0006232.1 MGP_129S1SvImJ_G0005205.1 mouse_genomes_project 11 31496041 31513487 + Gm12116 lincRNA lincRNA MGP_129S1SvImJ_T0012640.1 MGP_129S1SvImJ_G0010729.1 mouse_genomes_project 11 58447570 58448585 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006248.1 MGP_129S1SvImJ_G0005220.1 mouse_genomes_project 11 45359803 45366690 - 2310031A07Rik lincRNA lincRNA MGP_129S1SvImJ_T0030834.1 MGP_129S1SvImJ_G0018738.1 mouse_genomes_project 11 77580944 77618968 - MGP_129S1SvImJ_P0030834 Gosr1 protein_coding protein_coding MGP_129S1SvImJ_T0030835.1 MGP_129S1SvImJ_G0018738.1 mouse_genomes_project 11 77603961 77618956 - Gosr1 protein_coding processed_transcript MGP_129S1SvImJ_T0032579.1 MGP_129S1SvImJ_G0019206.1 mouse_genomes_project 11 104356477 104434083 - MGP_129S1SvImJ_P0032579 Brca1 protein_coding protein_coding MGP_129S1SvImJ_T0032580.1 MGP_129S1SvImJ_G0019206.1 mouse_genomes_project 11 104364020 104383130 - Brca1 protein_coding retained_intron MGP_129S1SvImJ_T0032581.1 MGP_129S1SvImJ_G0019206.1 mouse_genomes_project 11 104387562 104397262 - Brca1 protein_coding retained_intron MGP_129S1SvImJ_T0032582.1 MGP_129S1SvImJ_G0019206.1 mouse_genomes_project 11 104398995 104399661 - MGP_129S1SvImJ_P0032582 Brca1 protein_coding protein_coding MGP_129S1SvImJ_T0032583.1 MGP_129S1SvImJ_G0019206.1 mouse_genomes_project 11 104399009 104400009 - Brca1 protein_coding processed_transcript MGP_129S1SvImJ_T0032584.1 MGP_129S1SvImJ_G0019206.1 mouse_genomes_project 11 104400309 104434159 - MGP_129S1SvImJ_P0032584 Brca1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032585.1 MGP_129S1SvImJ_G0019206.1 mouse_genomes_project 11 104409550 104433786 - MGP_129S1SvImJ_P0032585 Brca1 protein_coding protein_coding MGP_129S1SvImJ_T0006292.1 MGP_129S1SvImJ_G0005257.1 mouse_genomes_project 11 73683107 73686083 - 4732414G09Rik lincRNA lincRNA MGP_129S1SvImJ_T0006293.1 MGP_129S1SvImJ_G0005257.1 mouse_genomes_project 11 73683107 73686046 - 4732414G09Rik lincRNA lincRNA MGP_129S1SvImJ_T0032846.1 MGP_129S1SvImJ_G0019251.1 mouse_genomes_project 11 105973131 105980555 - MGP_129S1SvImJ_P0032846 C1ql1 protein_coding protein_coding MGP_129S1SvImJ_T0033226.1 MGP_129S1SvImJ_G0019335.1 mouse_genomes_project 11 113039477 113056084 + Arsg protein_coding processed_transcript MGP_129S1SvImJ_T0033227.1 MGP_129S1SvImJ_G0019335.1 mouse_genomes_project 11 113039477 113140350 + MGP_129S1SvImJ_P0033227 Arsg protein_coding protein_coding MGP_129S1SvImJ_T0033228.1 MGP_129S1SvImJ_G0019335.1 mouse_genomes_project 11 113051107 113055982 + Arsg protein_coding processed_transcript MGP_129S1SvImJ_T0033229.1 MGP_129S1SvImJ_G0019335.1 mouse_genomes_project 11 113051690 113140355 + MGP_129S1SvImJ_P0033229 Arsg protein_coding protein_coding MGP_129S1SvImJ_T0033230.1 MGP_129S1SvImJ_G0019335.1 mouse_genomes_project 11 113110289 113140355 + MGP_129S1SvImJ_P0033230 Arsg protein_coding protein_coding MGP_129S1SvImJ_T0100502.1 MGP_129S1SvImJ_G0038569.1 mouse_genomes_project 11 56064693 56064789 + Gm22603 snoRNA snoRNA MGP_129S1SvImJ_T0003362.1 MGP_129S1SvImJ_G0003101.1 mouse_genomes_project 11 120024162 120029820 - Sap30bpos antisense antisense MGP_129S1SvImJ_T0032780.1 MGP_129S1SvImJ_G0019237.1 mouse_genomes_project 11 105430624 105448187 - MGP_129S1SvImJ_P0032780 Itga2b protein_coding protein_coding MGP_129S1SvImJ_T0032781.1 MGP_129S1SvImJ_G0019237.1 mouse_genomes_project 11 105430631 105433523 - Itga2b protein_coding processed_transcript MGP_129S1SvImJ_T0032782.1 MGP_129S1SvImJ_G0019237.1 mouse_genomes_project 11 105433171 105434672 - Itga2b protein_coding processed_transcript MGP_129S1SvImJ_T0032783.1 MGP_129S1SvImJ_G0019237.1 mouse_genomes_project 11 105433229 105435917 - Itga2b protein_coding processed_transcript MGP_129S1SvImJ_T0032784.1 MGP_129S1SvImJ_G0019237.1 mouse_genomes_project 11 105433804 105445503 - Itga2b protein_coding processed_transcript MGP_129S1SvImJ_T0032785.1 MGP_129S1SvImJ_G0019237.1 mouse_genomes_project 11 105434551 105435711 - Itga2b protein_coding processed_transcript MGP_129S1SvImJ_T0032786.1 MGP_129S1SvImJ_G0019237.1 mouse_genomes_project 11 105434861 105438187 - Itga2b protein_coding processed_transcript MGP_129S1SvImJ_T0032787.1 MGP_129S1SvImJ_G0019237.1 mouse_genomes_project 11 105438564 105439290 - Itga2b protein_coding processed_transcript MGP_129S1SvImJ_T0032788.1 MGP_129S1SvImJ_G0019237.1 mouse_genomes_project 11 105443643 105445259 - Itga2b protein_coding processed_transcript MGP_129S1SvImJ_T0032789.1 MGP_129S1SvImJ_G0019237.1 mouse_genomes_project 11 105446103 105448426 - Itga2b protein_coding processed_transcript MGP_129S1SvImJ_T0029897.1 MGP_129S1SvImJ_G0018514.1 mouse_genomes_project 11 69451271 69457287 + MGP_129S1SvImJ_P0029897 Aurkb protein_coding protein_coding MGP_129S1SvImJ_T0029898.1 MGP_129S1SvImJ_G0018514.1 mouse_genomes_project 11 69451276 69457287 + MGP_129S1SvImJ_P0029898 Aurkb protein_coding protein_coding MGP_129S1SvImJ_T0029899.1 MGP_129S1SvImJ_G0018514.1 mouse_genomes_project 11 69451295 69453843 + Aurkb protein_coding processed_transcript MGP_129S1SvImJ_T0029900.1 MGP_129S1SvImJ_G0018514.1 mouse_genomes_project 11 69451314 69453921 + Aurkb protein_coding retained_intron MGP_129S1SvImJ_T0029901.1 MGP_129S1SvImJ_G0018514.1 mouse_genomes_project 11 69453601 69454698 + Aurkb protein_coding retained_intron MGP_129S1SvImJ_T0029902.1 MGP_129S1SvImJ_G0018514.1 mouse_genomes_project 11 69454152 69454700 + Aurkb protein_coding retained_intron MGP_129S1SvImJ_T0029903.1 MGP_129S1SvImJ_G0018514.1 mouse_genomes_project 11 69454193 69456360 + Aurkb protein_coding retained_intron MGP_129S1SvImJ_T0029904.1 MGP_129S1SvImJ_G0018514.1 mouse_genomes_project 11 69456185 69456762 + Aurkb protein_coding processed_transcript MGP_129S1SvImJ_T0031188.1 MGP_129S1SvImJ_G0018817.1 mouse_genomes_project 11 82042769 82052704 + MGP_129S1SvImJ_P0031188 Spaca3 protein_coding protein_coding MGP_129S1SvImJ_T0031189.1 MGP_129S1SvImJ_G0018817.1 mouse_genomes_project 11 82042776 82052708 + MGP_129S1SvImJ_P0031189 Spaca3 protein_coding protein_coding MGP_129S1SvImJ_T0003239.1 MGP_129S1SvImJ_G0003003.1 mouse_genomes_project 11 69830099 69831288 + Kdm6bos antisense antisense MGP_129S1SvImJ_T0032260.1 MGP_129S1SvImJ_G0019092.1 mouse_genomes_project 11 102081013 102087593 - MGP_129S1SvImJ_P0032260 Krt12 protein_coding protein_coding MGP_129S1SvImJ_T0028304.1 MGP_129S1SvImJ_G0018096.1 mouse_genomes_project 11 23431380 23477336 - 5730522E02Rik protein_coding processed_transcript MGP_129S1SvImJ_T0028305.1 MGP_129S1SvImJ_G0018096.1 mouse_genomes_project 11 23431433 23448539 - 5730522E02Rik protein_coding processed_transcript MGP_129S1SvImJ_T0028306.1 MGP_129S1SvImJ_G0018096.1 mouse_genomes_project 11 23446116 24064705 - 5730522E02Rik protein_coding processed_transcript MGP_129S1SvImJ_T0028307.1 MGP_129S1SvImJ_G0018096.1 mouse_genomes_project 11 23447527 24064708 - MGP_129S1SvImJ_P0028307 5730522E02Rik protein_coding protein_coding MGP_129S1SvImJ_T0028308.1 MGP_129S1SvImJ_G0018096.1 mouse_genomes_project 11 23464808 23481231 - 5730522E02Rik protein_coding processed_transcript MGP_129S1SvImJ_T0028309.1 MGP_129S1SvImJ_G0018096.1 mouse_genomes_project 11 23477103 23604963 - MGP_129S1SvImJ_P0028309 5730522E02Rik protein_coding protein_coding MGP_129S1SvImJ_T0028310.1 MGP_129S1SvImJ_G0018096.1 mouse_genomes_project 11 23679875 23929529 - 5730522E02Rik protein_coding processed_transcript MGP_129S1SvImJ_T0028311.1 MGP_129S1SvImJ_G0018096.1 mouse_genomes_project 11 23952331 24064899 - 5730522E02Rik protein_coding processed_transcript MGP_129S1SvImJ_T0000872.1 MGP_129S1SvImJ_G0000805.1 mouse_genomes_project 11 44066047 44066350 - TEC TEC MGP_129S1SvImJ_T0028978.1 MGP_129S1SvImJ_G0018280.1 mouse_genomes_project 11 51288484 51325921 + MGP_129S1SvImJ_P0028978 Cdkl3 protein_coding protein_coding MGP_129S1SvImJ_T0028979.1 MGP_129S1SvImJ_G0018280.1 mouse_genomes_project 11 51288484 51330645 + MGP_129S1SvImJ_P0028979 Cdkl3 protein_coding protein_coding MGP_129S1SvImJ_T0028980.1 MGP_129S1SvImJ_G0018280.1 mouse_genomes_project 11 51288484 51380754 + MGP_129S1SvImJ_P0028980 Cdkl3 protein_coding protein_coding MGP_129S1SvImJ_T0028981.1 MGP_129S1SvImJ_G0018280.1 mouse_genomes_project 11 51288484 51325921 + MGP_129S1SvImJ_P0028981 Cdkl3 protein_coding protein_coding MGP_129S1SvImJ_T0028982.1 MGP_129S1SvImJ_G0018280.1 mouse_genomes_project 11 51288484 51321558 + MGP_129S1SvImJ_P0028982 Cdkl3 protein_coding protein_coding MGP_129S1SvImJ_T0028983.1 MGP_129S1SvImJ_G0018280.1 mouse_genomes_project 11 51288488 51314508 + MGP_129S1SvImJ_P0028983 Cdkl3 protein_coding protein_coding MGP_129S1SvImJ_T0028984.1 MGP_129S1SvImJ_G0018280.1 mouse_genomes_project 11 51288504 51321625 + MGP_129S1SvImJ_P0028984 Cdkl3 protein_coding protein_coding MGP_129S1SvImJ_T0028985.1 MGP_129S1SvImJ_G0018280.1 mouse_genomes_project 11 51288517 51304209 + MGP_129S1SvImJ_P0028985 Cdkl3 protein_coding protein_coding MGP_129S1SvImJ_T0028986.1 MGP_129S1SvImJ_G0018280.1 mouse_genomes_project 11 51288528 51350569 + MGP_129S1SvImJ_P0028986 Cdkl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028987.1 MGP_129S1SvImJ_G0018280.1 mouse_genomes_project 11 51288553 51325921 + MGP_129S1SvImJ_P0028987 Cdkl3 protein_coding protein_coding MGP_129S1SvImJ_T0028988.1 MGP_129S1SvImJ_G0018280.1 mouse_genomes_project 11 51289191 51385870 + MGP_129S1SvImJ_P0028988 Cdkl3 protein_coding protein_coding MGP_129S1SvImJ_T0028989.1 MGP_129S1SvImJ_G0018280.1 mouse_genomes_project 11 51313697 51381196 + MGP_129S1SvImJ_P0028989 Cdkl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028990.1 MGP_129S1SvImJ_G0018280.1 mouse_genomes_project 11 51313921 51321480 + MGP_129S1SvImJ_P0028990 Cdkl3 protein_coding protein_coding MGP_129S1SvImJ_T0028991.1 MGP_129S1SvImJ_G0018280.1 mouse_genomes_project 11 51320117 51385865 + MGP_129S1SvImJ_P0028991 Cdkl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028992.1 MGP_129S1SvImJ_G0018280.1 mouse_genomes_project 11 51320202 51385871 + MGP_129S1SvImJ_P0028992 Cdkl3 protein_coding protein_coding MGP_129S1SvImJ_T0028993.1 MGP_129S1SvImJ_G0018280.1 mouse_genomes_project 11 51321282 51385863 + MGP_129S1SvImJ_P0028993 Cdkl3 protein_coding protein_coding MGP_129S1SvImJ_T0028415.1 MGP_129S1SvImJ_G0018119.1 mouse_genomes_project 11 29047957 29072978 - MGP_129S1SvImJ_P0028415 Erlec1 protein_coding protein_coding MGP_129S1SvImJ_T0028416.1 MGP_129S1SvImJ_G0018119.1 mouse_genomes_project 11 29048934 29067301 - MGP_129S1SvImJ_P0028416 Erlec1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028417.1 MGP_129S1SvImJ_G0018119.1 mouse_genomes_project 11 29053779 29066917 - MGP_129S1SvImJ_P0028417 Erlec1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028418.1 MGP_129S1SvImJ_G0018119.1 mouse_genomes_project 11 29061513 29067034 - Erlec1 protein_coding retained_intron MGP_129S1SvImJ_T0028419.1 MGP_129S1SvImJ_G0018119.1 mouse_genomes_project 11 29071838 29073142 - Erlec1 protein_coding processed_transcript MGP_129S1SvImJ_T0017318.1 MGP_129S1SvImJ_G0015222.1 mouse_genomes_project 11 122801386 122804452 - Gm11748 processed_transcript processed_transcript MGP_129S1SvImJ_T0031194.1 MGP_129S1SvImJ_G0018820.1 mouse_genomes_project 11 83272194 83282598 - MGP_129S1SvImJ_P0031194 Gm17268 protein_coding protein_coding MGP_129S1SvImJ_T0012546.1 MGP_129S1SvImJ_G0010635.1 mouse_genomes_project 11 24715553 24728686 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009768.1 MGP_129S1SvImJ_G0007884.1 mouse_genomes_project 11 107582418 107582563 - miRNA miRNA MGP_129S1SvImJ_T0032402.1 MGP_129S1SvImJ_G0019164.1 mouse_genomes_project 11 103460400 103469767 - MGP_129S1SvImJ_P0032402 Dhx58 protein_coding protein_coding MGP_129S1SvImJ_T0032403.1 MGP_129S1SvImJ_G0019164.1 mouse_genomes_project 11 103460579 103462137 - Dhx58 protein_coding processed_transcript MGP_129S1SvImJ_T0032404.1 MGP_129S1SvImJ_G0019164.1 mouse_genomes_project 11 103460769 103464731 - Dhx58 protein_coding processed_transcript MGP_129S1SvImJ_T0032405.1 MGP_129S1SvImJ_G0019164.1 mouse_genomes_project 11 103466887 103469749 - Dhx58 protein_coding processed_transcript MGP_129S1SvImJ_T0032406.1 MGP_129S1SvImJ_G0019164.1 mouse_genomes_project 11 103467643 103468843 - Dhx58 protein_coding processed_transcript MGP_129S1SvImJ_T0032407.1 MGP_129S1SvImJ_G0019164.1 mouse_genomes_project 11 103468255 103469767 - Dhx58 protein_coding processed_transcript MGP_129S1SvImJ_T0100500.1 MGP_129S1SvImJ_G0038567.1 mouse_genomes_project 11 55020752 55020892 + Gm22884 snoRNA snoRNA MGP_129S1SvImJ_T0029265.1 MGP_129S1SvImJ_G0018356.1 mouse_genomes_project 11 58219078 58221858 - MGP_129S1SvImJ_P0029265 protein_coding protein_coding MGP_129S1SvImJ_T0029266.1 MGP_129S1SvImJ_G0018356.1 mouse_genomes_project 11 58219715 58221872 - MGP_129S1SvImJ_P0029266 protein_coding protein_coding MGP_129S1SvImJ_T0032120.1 MGP_129S1SvImJ_G0019055.1 mouse_genomes_project 11 100896485 100920506 + MGP_129S1SvImJ_P0032120 Stard3 protein_coding protein_coding MGP_129S1SvImJ_T0032121.1 MGP_129S1SvImJ_G0019055.1 mouse_genomes_project 11 100896547 100916238 + Stard3 protein_coding processed_transcript MGP_129S1SvImJ_T0032122.1 MGP_129S1SvImJ_G0019055.1 mouse_genomes_project 11 100896548 100920519 + Stard3 protein_coding processed_transcript MGP_129S1SvImJ_T0032123.1 MGP_129S1SvImJ_G0019055.1 mouse_genomes_project 11 100896561 100916243 + Stard3 protein_coding processed_transcript MGP_129S1SvImJ_T0032124.1 MGP_129S1SvImJ_G0019055.1 mouse_genomes_project 11 100914927 100918056 + Stard3 protein_coding processed_transcript MGP_129S1SvImJ_T0032125.1 MGP_129S1SvImJ_G0019055.1 mouse_genomes_project 11 100915854 100917637 + Stard3 protein_coding processed_transcript MGP_129S1SvImJ_T0032126.1 MGP_129S1SvImJ_G0019055.1 mouse_genomes_project 11 100917563 100918756 + Stard3 protein_coding processed_transcript MGP_129S1SvImJ_T0028229.1 MGP_129S1SvImJ_G0018081.1 mouse_genomes_project 11 20604838 20693475 - MGP_129S1SvImJ_P0028229 protein_coding protein_coding MGP_129S1SvImJ_T0028230.1 MGP_129S1SvImJ_G0018081.1 mouse_genomes_project 11 20608461 20693345 - MGP_129S1SvImJ_P0028230 protein_coding protein_coding MGP_129S1SvImJ_T0028231.1 MGP_129S1SvImJ_G0018081.1 mouse_genomes_project 11 20608466 20690089 - MGP_129S1SvImJ_P0028231 protein_coding protein_coding MGP_129S1SvImJ_T0028232.1 MGP_129S1SvImJ_G0018081.1 mouse_genomes_project 11 20608537 20666722 - protein_coding retained_intron MGP_129S1SvImJ_T0028233.1 MGP_129S1SvImJ_G0018081.1 mouse_genomes_project 11 20608725 20682555 - protein_coding processed_transcript MGP_129S1SvImJ_T0028234.1 MGP_129S1SvImJ_G0018081.1 mouse_genomes_project 11 20665926 20693277 - MGP_129S1SvImJ_P0028234 protein_coding protein_coding MGP_129S1SvImJ_T0012531.1 MGP_129S1SvImJ_G0010620.1 mouse_genomes_project 11 18822690 18823292 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031293.1 MGP_129S1SvImJ_G0018852.1 mouse_genomes_project 11 84859466 84864213 - MGP_129S1SvImJ_P0031293 Ccl5 protein_coding protein_coding MGP_129S1SvImJ_T0031294.1 MGP_129S1SvImJ_G0018852.1 mouse_genomes_project 11 84862426 84864208 - Ccl5 protein_coding retained_intron MGP_129S1SvImJ_T0029654.1 MGP_129S1SvImJ_G0018455.1 mouse_genomes_project 11 62570050 62585597 - MGP_129S1SvImJ_P0029654 Cenpv protein_coding protein_coding MGP_129S1SvImJ_T0029655.1 MGP_129S1SvImJ_G0018455.1 mouse_genomes_project 11 62570053 62573002 - Cenpv protein_coding retained_intron MGP_129S1SvImJ_T0029656.1 MGP_129S1SvImJ_G0018455.1 mouse_genomes_project 11 62570247 62584821 - Cenpv protein_coding processed_transcript MGP_129S1SvImJ_T0029657.1 MGP_129S1SvImJ_G0018455.1 mouse_genomes_project 11 62572598 62584965 - Cenpv protein_coding processed_transcript MGP_129S1SvImJ_T0029658.1 MGP_129S1SvImJ_G0018455.1 mouse_genomes_project 11 62579038 62585339 - MGP_129S1SvImJ_P0029658 Cenpv protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029659.1 MGP_129S1SvImJ_G0018455.1 mouse_genomes_project 11 62579269 62585339 - Cenpv protein_coding processed_transcript MGP_129S1SvImJ_T0009740.1 MGP_129S1SvImJ_G0007856.1 mouse_genomes_project 11 88153206 88153298 - Mir21a miRNA miRNA MGP_129S1SvImJ_T0034037.1 MGP_129S1SvImJ_G0019495.1 mouse_genomes_project 11 124796654 124799167 + MGP_129S1SvImJ_P0034037 0610009L18Rik protein_coding protein_coding MGP_129S1SvImJ_T0011333.1 MGP_129S1SvImJ_G0009449.1 mouse_genomes_project 11 103547818 103548106 - Gm24358 misc_RNA misc_RNA MGP_129S1SvImJ_T0032567.1 MGP_129S1SvImJ_G0019202.1 mouse_genomes_project 11 104309831 104313586 + MGP_129S1SvImJ_P0032567 protein_coding protein_coding MGP_129S1SvImJ_T0032568.1 MGP_129S1SvImJ_G0019202.1 mouse_genomes_project 11 104309971 104311782 + protein_coding processed_transcript MGP_129S1SvImJ_T0032569.1 MGP_129S1SvImJ_G0019202.1 mouse_genomes_project 11 104309979 104313586 + MGP_129S1SvImJ_P0032569 protein_coding protein_coding MGP_129S1SvImJ_T0032570.1 MGP_129S1SvImJ_G0019202.1 mouse_genomes_project 11 104311459 104313586 + MGP_129S1SvImJ_P0032570 protein_coding protein_coding MGP_129S1SvImJ_T0032571.1 MGP_129S1SvImJ_G0019202.1 mouse_genomes_project 11 104312721 104313586 + protein_coding processed_transcript MGP_129S1SvImJ_T0031990.1 MGP_129S1SvImJ_G0019027.1 mouse_genomes_project 11 99598402 99681511 - MGP_129S1SvImJ_P0031990 Npepps protein_coding protein_coding MGP_129S1SvImJ_T0031991.1 MGP_129S1SvImJ_G0019027.1 mouse_genomes_project 11 99598402 99682040 - MGP_129S1SvImJ_P0031991 Npepps protein_coding protein_coding MGP_129S1SvImJ_T0031992.1 MGP_129S1SvImJ_G0019027.1 mouse_genomes_project 11 99598404 99682051 - MGP_129S1SvImJ_P0031992 Npepps protein_coding protein_coding MGP_129S1SvImJ_T0031993.1 MGP_129S1SvImJ_G0019027.1 mouse_genomes_project 11 99599468 99604989 - Npepps protein_coding retained_intron MGP_129S1SvImJ_T0031994.1 MGP_129S1SvImJ_G0019027.1 mouse_genomes_project 11 99599493 99636781 - Npepps protein_coding retained_intron MGP_129S1SvImJ_T0031995.1 MGP_129S1SvImJ_G0019027.1 mouse_genomes_project 11 99599493 99681457 - MGP_129S1SvImJ_P0031995 Npepps protein_coding protein_coding MGP_129S1SvImJ_T0031996.1 MGP_129S1SvImJ_G0019027.1 mouse_genomes_project 11 99599718 99605822 - Npepps protein_coding retained_intron MGP_129S1SvImJ_T0031997.1 MGP_129S1SvImJ_G0019027.1 mouse_genomes_project 11 99606063 99617354 - Npepps protein_coding retained_intron MGP_129S1SvImJ_T0031998.1 MGP_129S1SvImJ_G0019027.1 mouse_genomes_project 11 99615694 99625958 - Npepps protein_coding retained_intron MGP_129S1SvImJ_T0031999.1 MGP_129S1SvImJ_G0019027.1 mouse_genomes_project 11 99616983 99619300 - Npepps protein_coding retained_intron MGP_129S1SvImJ_T0032000.1 MGP_129S1SvImJ_G0019027.1 mouse_genomes_project 11 99622125 99628778 - Npepps protein_coding retained_intron MGP_129S1SvImJ_T0032001.1 MGP_129S1SvImJ_G0019027.1 mouse_genomes_project 11 99624452 99636793 - Npepps protein_coding processed_transcript MGP_129S1SvImJ_T0032002.1 MGP_129S1SvImJ_G0019027.1 mouse_genomes_project 11 99624457 99637698 - MGP_129S1SvImJ_P0032002 Npepps protein_coding protein_coding MGP_129S1SvImJ_T0032003.1 MGP_129S1SvImJ_G0019027.1 mouse_genomes_project 11 99628750 99667468 - MGP_129S1SvImJ_P0032003 Npepps protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032004.1 MGP_129S1SvImJ_G0019027.1 mouse_genomes_project 11 99636875 99638061 - Npepps protein_coding retained_intron MGP_129S1SvImJ_T0032005.1 MGP_129S1SvImJ_G0019027.1 mouse_genomes_project 11 99637548 99681433 - MGP_129S1SvImJ_P0032005 Npepps protein_coding protein_coding MGP_129S1SvImJ_T0032006.1 MGP_129S1SvImJ_G0019027.1 mouse_genomes_project 11 99639342 99681495 - MGP_129S1SvImJ_P0032006 Npepps protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032007.1 MGP_129S1SvImJ_G0019027.1 mouse_genomes_project 11 99656052 99682039 - Npepps protein_coding retained_intron MGP_129S1SvImJ_T0032008.1 MGP_129S1SvImJ_G0019027.1 mouse_genomes_project 11 99656723 99667460 - MGP_129S1SvImJ_P0032008 Npepps protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027793.1 MGP_129S1SvImJ_G0017978.1 mouse_genomes_project 11 1119679 1147467 + Tbc1d10a protein_coding processed_transcript MGP_129S1SvImJ_T0027794.1 MGP_129S1SvImJ_G0017978.1 mouse_genomes_project 11 1119679 1148087 + MGP_129S1SvImJ_P0027794 Tbc1d10a protein_coding protein_coding MGP_129S1SvImJ_T0027795.1 MGP_129S1SvImJ_G0017978.1 mouse_genomes_project 11 1119712 1148084 + MGP_129S1SvImJ_P0027795 Tbc1d10a protein_coding protein_coding MGP_129S1SvImJ_T0027796.1 MGP_129S1SvImJ_G0017978.1 mouse_genomes_project 11 1137998 1142572 + Tbc1d10a protein_coding processed_transcript MGP_129S1SvImJ_T0027797.1 MGP_129S1SvImJ_G0017978.1 mouse_genomes_project 11 1144892 1146182 + Tbc1d10a protein_coding processed_transcript MGP_129S1SvImJ_T0027798.1 MGP_129S1SvImJ_G0017978.1 mouse_genomes_project 11 1145056 1146438 + Tbc1d10a protein_coding processed_transcript MGP_129S1SvImJ_T0032492.1 MGP_129S1SvImJ_G0019185.1 mouse_genomes_project 11 103998212 104008059 + Cntnap1 protein_coding processed_transcript MGP_129S1SvImJ_T0032494.1 MGP_129S1SvImJ_G0019185.1 mouse_genomes_project 11 104005767 104020547 + MGP_129S1SvImJ_P0032494 Cntnap1 protein_coding protein_coding MGP_129S1SvImJ_T0034298.1 MGP_129S1SvImJ_G0019551.1 mouse_genomes_project 11 126061527 126069883 - MGP_129S1SvImJ_P0034298 Zfp750 protein_coding protein_coding MGP_129S1SvImJ_T0012534.1 MGP_129S1SvImJ_G0010623.1 mouse_genomes_project 11 19054186 19054399 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006395.1 MGP_129S1SvImJ_G0005330.1 mouse_genomes_project 11 123507792 123513135 + Gm26888 lincRNA lincRNA MGP_129S1SvImJ_T0099276.1 MGP_129S1SvImJ_G0037343.1 mouse_genomes_project 11 95423594 95423701 - Gm24856 snRNA snRNA MGP_129S1SvImJ_T0028994.1 MGP_129S1SvImJ_G0018281.1 mouse_genomes_project 11 51396459 51425107 + MGP_129S1SvImJ_P0028994 Ppp2ca protein_coding protein_coding MGP_129S1SvImJ_T0028995.1 MGP_129S1SvImJ_G0018281.1 mouse_genomes_project 11 51416410 51417360 + Ppp2ca protein_coding retained_intron MGP_129S1SvImJ_T0031282.1 MGP_129S1SvImJ_G0018849.1 mouse_genomes_project 11 84763042 84785961 - MGP_129S1SvImJ_P0031282 Mmp28 protein_coding protein_coding MGP_129S1SvImJ_T0031283.1 MGP_129S1SvImJ_G0018849.1 mouse_genomes_project 11 84764148 84785900 - MGP_129S1SvImJ_P0031283 Mmp28 protein_coding protein_coding MGP_129S1SvImJ_T0031284.1 MGP_129S1SvImJ_G0018849.1 mouse_genomes_project 11 84764148 84786010 - MGP_129S1SvImJ_P0031284 Mmp28 protein_coding protein_coding MGP_129S1SvImJ_T0031285.1 MGP_129S1SvImJ_G0018849.1 mouse_genomes_project 11 84765336 84785931 - MGP_129S1SvImJ_P0031285 Mmp28 protein_coding protein_coding MGP_129S1SvImJ_T0031286.1 MGP_129S1SvImJ_G0018849.1 mouse_genomes_project 11 84773634 84786010 - Mmp28 protein_coding processed_transcript MGP_129S1SvImJ_T0029403.1 MGP_129S1SvImJ_G0018411.1 mouse_genomes_project 11 59830743 59831640 - Pemt protein_coding processed_transcript MGP_129S1SvImJ_T0029404.1 MGP_129S1SvImJ_G0018411.1 mouse_genomes_project 11 59830743 59900017 - MGP_129S1SvImJ_P0029404 Pemt protein_coding protein_coding MGP_129S1SvImJ_T0029405.1 MGP_129S1SvImJ_G0018411.1 mouse_genomes_project 11 59830743 59909539 - MGP_129S1SvImJ_P0029405 Pemt protein_coding protein_coding MGP_129S1SvImJ_T0029406.1 MGP_129S1SvImJ_G0018411.1 mouse_genomes_project 11 59830743 59909543 - MGP_129S1SvImJ_P0029406 Pemt protein_coding protein_coding MGP_129S1SvImJ_T0029407.1 MGP_129S1SvImJ_G0018411.1 mouse_genomes_project 11 59830956 59899918 - Pemt protein_coding processed_transcript MGP_129S1SvImJ_T0029408.1 MGP_129S1SvImJ_G0018411.1 mouse_genomes_project 11 59830973 59894832 - MGP_129S1SvImJ_P0029408 Pemt protein_coding protein_coding MGP_129S1SvImJ_T0029409.1 MGP_129S1SvImJ_G0018411.1 mouse_genomes_project 11 59834283 59909551 - MGP_129S1SvImJ_P0029409 Pemt protein_coding protein_coding MGP_129S1SvImJ_T0029410.1 MGP_129S1SvImJ_G0018411.1 mouse_genomes_project 11 59836988 59884261 - Pemt protein_coding processed_transcript MGP_129S1SvImJ_T0029411.1 MGP_129S1SvImJ_G0018411.1 mouse_genomes_project 11 59837008 59844093 - Pemt protein_coding processed_transcript MGP_129S1SvImJ_T0029412.1 MGP_129S1SvImJ_G0018411.1 mouse_genomes_project 11 59907606 59909547 - Pemt protein_coding processed_transcript MGP_129S1SvImJ_T0033334.1 MGP_129S1SvImJ_G0019359.1 mouse_genomes_project 11 118704231 118726127 + Kif19a protein_coding processed_transcript MGP_129S1SvImJ_T0033335.1 MGP_129S1SvImJ_G0019359.1 mouse_genomes_project 11 118704231 118726127 + Kif19a protein_coding processed_transcript MGP_129S1SvImJ_T0033336.1 MGP_129S1SvImJ_G0019359.1 mouse_genomes_project 11 118704231 118728083 + MGP_129S1SvImJ_P0033336 Kif19a protein_coding protein_coding MGP_129S1SvImJ_T0033337.1 MGP_129S1SvImJ_G0019359.1 mouse_genomes_project 11 118704232 118730524 + MGP_129S1SvImJ_P0033337 Kif19a protein_coding protein_coding MGP_129S1SvImJ_T0033338.1 MGP_129S1SvImJ_G0019359.1 mouse_genomes_project 11 118724606 118725515 + Kif19a protein_coding retained_intron MGP_129S1SvImJ_T0033339.1 MGP_129S1SvImJ_G0019359.1 mouse_genomes_project 11 118727850 118730688 + MGP_129S1SvImJ_P0033339 Kif19a protein_coding protein_coding MGP_129S1SvImJ_T0033340.1 MGP_129S1SvImJ_G0019359.1 mouse_genomes_project 11 118727892 118729281 + Kif19a protein_coding retained_intron MGP_129S1SvImJ_T0033363.1 MGP_129S1SvImJ_G0019365.1 mouse_genomes_project 11 118926757 118941146 - Cd300c protein_coding processed_transcript MGP_129S1SvImJ_T0033364.1 MGP_129S1SvImJ_G0019365.1 mouse_genomes_project 11 118926909 118930968 - MGP_129S1SvImJ_P0033364 Cd300c protein_coding protein_coding MGP_129S1SvImJ_T0033365.1 MGP_129S1SvImJ_G0019365.1 mouse_genomes_project 11 118926919 118930968 - MGP_129S1SvImJ_P0033365 Cd300c protein_coding protein_coding MGP_129S1SvImJ_T0012472.1 MGP_129S1SvImJ_G0010561.1 mouse_genomes_project 11 587974 588871 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033180.1 MGP_129S1SvImJ_G0019327.1 mouse_genomes_project 11 111892674 112347363 + MGP_129S1SvImJ_P0033180 Cep112 protein_coding protein_coding MGP_129S1SvImJ_T0033181.1 MGP_129S1SvImJ_G0019327.1 mouse_genomes_project 11 111892748 112347362 + MGP_129S1SvImJ_P0033181 Cep112 protein_coding protein_coding MGP_129S1SvImJ_T0033182.1 MGP_129S1SvImJ_G0019327.1 mouse_genomes_project 11 111892759 111940965 + Cep112 protein_coding retained_intron MGP_129S1SvImJ_T0033183.1 MGP_129S1SvImJ_G0019327.1 mouse_genomes_project 11 111892773 111909081 + MGP_129S1SvImJ_P0033183 Cep112 protein_coding protein_coding MGP_129S1SvImJ_T0033184.1 MGP_129S1SvImJ_G0019327.1 mouse_genomes_project 11 111892947 112004536 + MGP_129S1SvImJ_P0033184 Cep112 protein_coding protein_coding MGP_129S1SvImJ_T0033185.1 MGP_129S1SvImJ_G0019327.1 mouse_genomes_project 11 111892990 112347363 + MGP_129S1SvImJ_P0033185 Cep112 protein_coding protein_coding MGP_129S1SvImJ_T0033186.1 MGP_129S1SvImJ_G0019327.1 mouse_genomes_project 11 111893098 112347007 + MGP_129S1SvImJ_P0033186 Cep112 protein_coding protein_coding MGP_129S1SvImJ_T0033187.1 MGP_129S1SvImJ_G0019327.1 mouse_genomes_project 11 111973001 112347098 + MGP_129S1SvImJ_P0033187 Cep112 protein_coding protein_coding MGP_129S1SvImJ_T0033188.1 MGP_129S1SvImJ_G0019327.1 mouse_genomes_project 11 112004526 112046537 + Cep112 protein_coding retained_intron MGP_129S1SvImJ_T0033189.1 MGP_129S1SvImJ_G0019327.1 mouse_genomes_project 11 112061270 112244913 + MGP_129S1SvImJ_P0033189 Cep112 protein_coding protein_coding MGP_129S1SvImJ_T0033190.1 MGP_129S1SvImJ_G0019327.1 mouse_genomes_project 11 112080214 112145176 + Cep112 protein_coding processed_transcript MGP_129S1SvImJ_T0033191.1 MGP_129S1SvImJ_G0019327.1 mouse_genomes_project 11 112120310 112347001 + Cep112 protein_coding processed_transcript MGP_129S1SvImJ_T0033192.1 MGP_129S1SvImJ_G0019327.1 mouse_genomes_project 11 112126167 112342622 + Cep112 protein_coding processed_transcript MGP_129S1SvImJ_T0033193.1 MGP_129S1SvImJ_G0019327.1 mouse_genomes_project 11 112165015 112347097 + MGP_129S1SvImJ_P0033193 Cep112 protein_coding protein_coding MGP_129S1SvImJ_T0033194.1 MGP_129S1SvImJ_G0019327.1 mouse_genomes_project 11 112165022 112347363 + MGP_129S1SvImJ_P0033194 Cep112 protein_coding protein_coding MGP_129S1SvImJ_T0033195.1 MGP_129S1SvImJ_G0019327.1 mouse_genomes_project 11 112165031 112347102 + MGP_129S1SvImJ_P0033195 Cep112 protein_coding protein_coding MGP_129S1SvImJ_T0033196.1 MGP_129S1SvImJ_G0019327.1 mouse_genomes_project 11 112197397 112291115 + Cep112 protein_coding processed_transcript MGP_129S1SvImJ_T0033197.1 MGP_129S1SvImJ_G0019327.1 mouse_genomes_project 11 112239302 112346110 + MGP_129S1SvImJ_P0033197 Cep112 protein_coding protein_coding MGP_129S1SvImJ_T0028292.1 MGP_129S1SvImJ_G0018092.1 mouse_genomes_project 11 21512325 21549258 - MGP_129S1SvImJ_P0028292 Rel protein_coding protein_coding MGP_129S1SvImJ_T0102154.1 MGP_129S1SvImJ_G0039989.1 mouse_genomes_project 11 97026222 97026958 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0027827.1 MGP_129S1SvImJ_G0017988.1 mouse_genomes_project 11 1718812 1728748 - MGP_129S1SvImJ_P0027827 Cabp7 protein_coding protein_coding MGP_129S1SvImJ_T0033619.1 MGP_129S1SvImJ_G0019415.1 mouse_genomes_project 11 120211007 120220676 - MGP_129S1SvImJ_P0033619 Trim65 protein_coding protein_coding MGP_129S1SvImJ_T0033620.1 MGP_129S1SvImJ_G0019415.1 mouse_genomes_project 11 120214289 120220680 - Trim65 protein_coding processed_transcript MGP_129S1SvImJ_T0033621.1 MGP_129S1SvImJ_G0019415.1 mouse_genomes_project 11 120214289 120220678 - MGP_129S1SvImJ_P0033621 Trim65 protein_coding protein_coding MGP_129S1SvImJ_T0027902.1 MGP_129S1SvImJ_G0018000.1 mouse_genomes_project 11 2306578 2484275 - MGP_129S1SvImJ_P0027902 Znrf3 protein_coding protein_coding MGP_129S1SvImJ_T0027903.1 MGP_129S1SvImJ_G0018000.1 mouse_genomes_project 11 2309821 2418329 - MGP_129S1SvImJ_P0027903 Znrf3 protein_coding protein_coding MGP_129S1SvImJ_T0027904.1 MGP_129S1SvImJ_G0018000.1 mouse_genomes_project 11 2320009 2484275 - MGP_129S1SvImJ_P0027904 Znrf3 protein_coding protein_coding MGP_129S1SvImJ_T0009755.1 MGP_129S1SvImJ_G0007871.1 mouse_genomes_project 11 100429119 100429189 - Gm22461 miRNA miRNA MGP_129S1SvImJ_T0030055.1 MGP_129S1SvImJ_G0018551.1 mouse_genomes_project 11 70206648 70234731 - MGP_129S1SvImJ_P0030055 Polr2a protein_coding protein_coding MGP_129S1SvImJ_T0030056.1 MGP_129S1SvImJ_G0018551.1 mouse_genomes_project 11 70207061 70234316 - MGP_129S1SvImJ_P0030056 Polr2a protein_coding protein_coding MGP_129S1SvImJ_T0030057.1 MGP_129S1SvImJ_G0018551.1 mouse_genomes_project 11 70208862 70210000 - Polr2a protein_coding processed_transcript MGP_129S1SvImJ_T0030058.1 MGP_129S1SvImJ_G0018551.1 mouse_genomes_project 11 70214275 70215222 - Polr2a protein_coding processed_transcript MGP_129S1SvImJ_T0031295.1 MGP_129S1SvImJ_G0018853.1 mouse_genomes_project 11 84914267 84919984 - MGP_129S1SvImJ_P0031295 Ccl9 protein_coding protein_coding MGP_129S1SvImJ_T0031296.1 MGP_129S1SvImJ_G0018853.1 mouse_genomes_project 11 84916665 84918490 - Ccl9 protein_coding processed_transcript MGP_129S1SvImJ_T0028312.1 MGP_129S1SvImJ_G0018097.1 mouse_genomes_project 11 24244425 24335450 + MGP_129S1SvImJ_P0028312 Fancl protein_coding protein_coding MGP_129S1SvImJ_T0028313.1 MGP_129S1SvImJ_G0018097.1 mouse_genomes_project 11 24245492 24332698 + Fancl protein_coding processed_transcript MGP_129S1SvImJ_T0028314.1 MGP_129S1SvImJ_G0018097.1 mouse_genomes_project 11 24245492 24287139 + MGP_129S1SvImJ_P0028314 Fancl protein_coding protein_coding MGP_129S1SvImJ_T0028315.1 MGP_129S1SvImJ_G0018097.1 mouse_genomes_project 11 24245492 24334995 + MGP_129S1SvImJ_P0028315 Fancl protein_coding protein_coding MGP_129S1SvImJ_T0028316.1 MGP_129S1SvImJ_G0018097.1 mouse_genomes_project 11 24331908 24335004 + MGP_129S1SvImJ_P0028316 Fancl protein_coding protein_coding MGP_129S1SvImJ_T0034223.1 MGP_129S1SvImJ_G0019532.1 mouse_genomes_project 11 125333646 125445548 - MGP_129S1SvImJ_P0034223 Ccdc57 protein_coding protein_coding MGP_129S1SvImJ_T0034224.1 MGP_129S1SvImJ_G0019532.1 mouse_genomes_project 11 125333659 125386410 - Ccdc57 protein_coding processed_transcript MGP_129S1SvImJ_T0034225.1 MGP_129S1SvImJ_G0019532.1 mouse_genomes_project 11 125386530 125398533 - Ccdc57 protein_coding processed_transcript MGP_129S1SvImJ_T0028043.1 MGP_129S1SvImJ_G0018036.1 mouse_genomes_project 11 6055855 6202244 - MGP_129S1SvImJ_P0028043 Pkd1l1 protein_coding protein_coding MGP_129S1SvImJ_T0028044.1 MGP_129S1SvImJ_G0018036.1 mouse_genomes_project 11 6055922 6178523 - MGP_129S1SvImJ_P0028044 Pkd1l1 protein_coding protein_coding MGP_129S1SvImJ_T0028045.1 MGP_129S1SvImJ_G0018036.1 mouse_genomes_project 11 6073870 6091985 - Pkd1l1 protein_coding processed_transcript MGP_129S1SvImJ_T0033308.1 MGP_129S1SvImJ_G0019354.1 mouse_genomes_project 11 117557245 117586228 - MGP_129S1SvImJ_P0033308 Cdc42ep4 protein_coding protein_coding MGP_129S1SvImJ_T0033309.1 MGP_129S1SvImJ_G0019354.1 mouse_genomes_project 11 117557247 117586791 - MGP_129S1SvImJ_P0033309 Cdc42ep4 protein_coding protein_coding MGP_129S1SvImJ_T0033310.1 MGP_129S1SvImJ_G0019354.1 mouse_genomes_project 11 117559378 117569705 - MGP_129S1SvImJ_P0033310 Cdc42ep4 protein_coding protein_coding MGP_129S1SvImJ_T0033311.1 MGP_129S1SvImJ_G0019354.1 mouse_genomes_project 11 117559700 117586064 - MGP_129S1SvImJ_P0033311 Cdc42ep4 protein_coding protein_coding MGP_129S1SvImJ_T0006338.1 MGP_129S1SvImJ_G0005288.1 mouse_genomes_project 11 97882289 97885026 + Gm26830 lincRNA lincRNA MGP_129S1SvImJ_T0032427.1 MGP_129S1SvImJ_G0019172.1 mouse_genomes_project 11 103639176 103668580 + MGP_129S1SvImJ_P0032427 Stat5a protein_coding protein_coding MGP_129S1SvImJ_T0032428.1 MGP_129S1SvImJ_G0019172.1 mouse_genomes_project 11 103639235 103642416 + MGP_129S1SvImJ_P0032428 Stat5a protein_coding protein_coding MGP_129S1SvImJ_T0032429.1 MGP_129S1SvImJ_G0019172.1 mouse_genomes_project 11 103639481 103668580 + MGP_129S1SvImJ_P0032429 Stat5a protein_coding protein_coding MGP_129S1SvImJ_T0032430.1 MGP_129S1SvImJ_G0019172.1 mouse_genomes_project 11 103641013 103643889 + MGP_129S1SvImJ_P0032430 Stat5a protein_coding protein_coding MGP_129S1SvImJ_T0032431.1 MGP_129S1SvImJ_G0019172.1 mouse_genomes_project 11 103641152 103668579 + MGP_129S1SvImJ_P0032431 Stat5a protein_coding protein_coding MGP_129S1SvImJ_T0032432.1 MGP_129S1SvImJ_G0019172.1 mouse_genomes_project 11 103662433 103663522 + Stat5a protein_coding processed_transcript MGP_129S1SvImJ_T0033884.1 MGP_129S1SvImJ_G0019468.1 mouse_genomes_project 11 122751880 122767247 + MGP_129S1SvImJ_P0033884 C1qtnf1 protein_coding protein_coding MGP_129S1SvImJ_T0033885.1 MGP_129S1SvImJ_G0019468.1 mouse_genomes_project 11 122752134 122773380 + MGP_129S1SvImJ_P0033885 C1qtnf1 protein_coding protein_coding MGP_129S1SvImJ_T0033886.1 MGP_129S1SvImJ_G0019468.1 mouse_genomes_project 11 122757475 122773380 + MGP_129S1SvImJ_P0033886 C1qtnf1 protein_coding protein_coding MGP_129S1SvImJ_T0033887.1 MGP_129S1SvImJ_G0019468.1 mouse_genomes_project 11 122766880 122767254 + MGP_129S1SvImJ_P0033887 C1qtnf1 protein_coding protein_coding MGP_129S1SvImJ_T0102137.1 MGP_129S1SvImJ_G0039972.1 mouse_genomes_project 11 59450165 59450540 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0029906.1 MGP_129S1SvImJ_G0018516.1 mouse_genomes_project 11 69476628 69478638 + Tmem107 protein_coding processed_transcript MGP_129S1SvImJ_T0029907.1 MGP_129S1SvImJ_G0018516.1 mouse_genomes_project 11 69476669 69477319 + Tmem107 protein_coding processed_transcript MGP_129S1SvImJ_T0029908.1 MGP_129S1SvImJ_G0018516.1 mouse_genomes_project 11 69476688 69479076 + Tmem107 protein_coding processed_transcript MGP_129S1SvImJ_T0029909.1 MGP_129S1SvImJ_G0018516.1 mouse_genomes_project 11 69476733 69478839 + Tmem107 protein_coding processed_transcript MGP_129S1SvImJ_T0029910.1 MGP_129S1SvImJ_G0018516.1 mouse_genomes_project 11 69476751 69478631 + Tmem107 protein_coding processed_transcript MGP_129S1SvImJ_T0029911.1 MGP_129S1SvImJ_G0018516.1 mouse_genomes_project 11 69476762 69478630 + MGP_129S1SvImJ_P0029911 Tmem107 protein_coding protein_coding MGP_129S1SvImJ_T0029912.1 MGP_129S1SvImJ_G0018516.1 mouse_genomes_project 11 69477117 69478375 + Tmem107 protein_coding processed_transcript MGP_129S1SvImJ_T0003337.1 MGP_129S1SvImJ_G0003081.1 mouse_genomes_project 11 110152327 110153666 - Gm11706 antisense antisense MGP_129S1SvImJ_T0100485.1 MGP_129S1SvImJ_G0038552.1 mouse_genomes_project 11 20549229 20549331 + Gm23772 snoRNA snoRNA MGP_129S1SvImJ_T0003274.1 MGP_129S1SvImJ_G0003030.1 mouse_genomes_project 11 89428362 89434813 - Gm11505 antisense antisense MGP_129S1SvImJ_T0030145.1 MGP_129S1SvImJ_G0018571.1 mouse_genomes_project 11 70431075 70436713 - Slc2a4 protein_coding retained_intron MGP_129S1SvImJ_T0030146.1 MGP_129S1SvImJ_G0018571.1 mouse_genomes_project 11 70431905 70436519 - MGP_129S1SvImJ_P0030146 Slc2a4 protein_coding protein_coding MGP_129S1SvImJ_T0030147.1 MGP_129S1SvImJ_G0018571.1 mouse_genomes_project 11 70432328 70436702 - MGP_129S1SvImJ_P0030147 Slc2a4 protein_coding protein_coding MGP_129S1SvImJ_T0030148.1 MGP_129S1SvImJ_G0018571.1 mouse_genomes_project 11 70433804 70436685 - MGP_129S1SvImJ_P0030148 Slc2a4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030149.1 MGP_129S1SvImJ_G0018571.1 mouse_genomes_project 11 70433804 70436512 - MGP_129S1SvImJ_P0030149 Slc2a4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030150.1 MGP_129S1SvImJ_G0018571.1 mouse_genomes_project 11 70434098 70436683 - MGP_129S1SvImJ_P0030150 Slc2a4 protein_coding protein_coding MGP_129S1SvImJ_T0030151.1 MGP_129S1SvImJ_G0018571.1 mouse_genomes_project 11 70434604 70436692 - MGP_129S1SvImJ_P0030151 Slc2a4 protein_coding protein_coding MGP_129S1SvImJ_T0098730.1 MGP_129S1SvImJ_G0036815.1 mouse_genomes_project 11 88563811 88563942 - Gm22387 scaRNA scaRNA MGP_129S1SvImJ_T0012632.1 MGP_129S1SvImJ_G0010721.1 mouse_genomes_project 11 57524046 57524337 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0030468.1 MGP_129S1SvImJ_G0018632.1 mouse_genomes_project 11 72825446 72827913 + MGP_129S1SvImJ_P0030468 Txndc17 protein_coding protein_coding MGP_129S1SvImJ_T0030469.1 MGP_129S1SvImJ_G0018632.1 mouse_genomes_project 11 72825514 72826575 + Txndc17 protein_coding retained_intron MGP_129S1SvImJ_T0029158.1 MGP_129S1SvImJ_G0018321.1 mouse_genomes_project 11 54393789 54400930 + MGP_129S1SvImJ_P0029158 Gpx3 protein_coding protein_coding MGP_129S1SvImJ_T0029159.1 MGP_129S1SvImJ_G0018321.1 mouse_genomes_project 11 54394108 54401731 + MGP_129S1SvImJ_P0029159 Gpx3 protein_coding protein_coding MGP_129S1SvImJ_T0029160.1 MGP_129S1SvImJ_G0018321.1 mouse_genomes_project 11 54394262 54400888 + MGP_129S1SvImJ_P0029160 Gpx3 protein_coding protein_coding MGP_129S1SvImJ_T0012505.1 MGP_129S1SvImJ_G0010594.1 mouse_genomes_project 11 12410949 12412049 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033240.1 MGP_129S1SvImJ_G0019338.1 mouse_genomes_project 11 113244396 113297727 - MGP_129S1SvImJ_P0033240 Fam20a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033241.1 MGP_129S1SvImJ_G0019338.1 mouse_genomes_project 11 113247573 113297704 - MGP_129S1SvImJ_P0033241 Fam20a protein_coding protein_coding MGP_129S1SvImJ_T0033242.1 MGP_129S1SvImJ_G0019338.1 mouse_genomes_project 11 113248121 113251067 - Fam20a protein_coding retained_intron MGP_129S1SvImJ_T0033243.1 MGP_129S1SvImJ_G0019338.1 mouse_genomes_project 11 113249283 113257623 - Fam20a protein_coding retained_intron MGP_129S1SvImJ_T0028516.1 MGP_129S1SvImJ_G0018145.1 mouse_genomes_project 11 31861282 31890214 - MGP_129S1SvImJ_P0028516 Gabrp protein_coding protein_coding MGP_129S1SvImJ_T0028517.1 MGP_129S1SvImJ_G0018145.1 mouse_genomes_project 11 31883627 31890216 - MGP_129S1SvImJ_P0028517 Gabrp protein_coding protein_coding MGP_129S1SvImJ_T0011320.1 MGP_129S1SvImJ_G0009436.1 mouse_genomes_project 11 53113108 53113418 + Gm22275 misc_RNA misc_RNA MGP_129S1SvImJ_T0012488.1 MGP_129S1SvImJ_G0010577.1 mouse_genomes_project 11 3943425 3944886 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029367.1 MGP_129S1SvImJ_G0018401.1 mouse_genomes_project 11 59384091 59411901 + MGP_129S1SvImJ_P0029367 Nlrp3 protein_coding protein_coding MGP_129S1SvImJ_T0029368.1 MGP_129S1SvImJ_G0018401.1 mouse_genomes_project 11 59385209 59411904 + MGP_129S1SvImJ_P0029368 Nlrp3 protein_coding protein_coding MGP_129S1SvImJ_T0029369.1 MGP_129S1SvImJ_G0018401.1 mouse_genomes_project 11 59385279 59391444 + MGP_129S1SvImJ_P0029369 Nlrp3 protein_coding protein_coding MGP_129S1SvImJ_T0031895.1 MGP_129S1SvImJ_G0019003.1 mouse_genomes_project 11 98598637 98601976 + MGP_129S1SvImJ_P0031895 Hoxb7 protein_coding protein_coding MGP_129S1SvImJ_T0031896.1 MGP_129S1SvImJ_G0019003.1 mouse_genomes_project 11 98600730 98601307 + Hoxb7 protein_coding processed_transcript MGP_129S1SvImJ_T0031591.1 MGP_129S1SvImJ_G0018924.1 mouse_genomes_project 11 90055957 90454766 - MGP_129S1SvImJ_P0031591 Msi2 protein_coding protein_coding MGP_129S1SvImJ_T0031592.1 MGP_129S1SvImJ_G0018924.1 mouse_genomes_project 11 90061895 90454761 - MGP_129S1SvImJ_P0031592 Msi2 protein_coding protein_coding MGP_129S1SvImJ_T0031593.1 MGP_129S1SvImJ_G0018924.1 mouse_genomes_project 11 90083608 90318472 - Msi2 protein_coding retained_intron MGP_129S1SvImJ_T0031594.1 MGP_129S1SvImJ_G0018924.1 mouse_genomes_project 11 90203118 90454766 - Msi2 protein_coding retained_intron MGP_129S1SvImJ_T0031595.1 MGP_129S1SvImJ_G0018924.1 mouse_genomes_project 11 90318379 90454981 - MGP_129S1SvImJ_P0031595 Msi2 protein_coding protein_coding MGP_129S1SvImJ_T0031596.1 MGP_129S1SvImJ_G0018924.1 mouse_genomes_project 11 90420119 90454766 - MGP_129S1SvImJ_P0031596 Msi2 protein_coding protein_coding MGP_129S1SvImJ_T0031597.1 MGP_129S1SvImJ_G0018924.1 mouse_genomes_project 11 90449019 90454766 - Msi2 protein_coding processed_transcript MGP_129S1SvImJ_T0003348.1 MGP_129S1SvImJ_G0003091.1 mouse_genomes_project 11 112432680 112435383 - Gm11670 antisense antisense MGP_129S1SvImJ_T0032093.1 MGP_129S1SvImJ_G0019049.1 mouse_genomes_project 11 100529808 100554514 - MGP_129S1SvImJ_P0032093 Stac2 protein_coding protein_coding MGP_129S1SvImJ_T0032094.1 MGP_129S1SvImJ_G0019049.1 mouse_genomes_project 11 100533277 100538247 - MGP_129S1SvImJ_P0032094 Stac2 protein_coding protein_coding MGP_129S1SvImJ_T0032374.1 MGP_129S1SvImJ_G0019159.1 mouse_genomes_project 11 103306728 103331348 + Ttc25 protein_coding retained_intron MGP_129S1SvImJ_T0032375.1 MGP_129S1SvImJ_G0019159.1 mouse_genomes_project 11 103306744 103311241 + Ttc25 protein_coding retained_intron MGP_129S1SvImJ_T0032376.1 MGP_129S1SvImJ_G0019159.1 mouse_genomes_project 11 103306835 103333507 + MGP_129S1SvImJ_P0032376 Ttc25 protein_coding protein_coding MGP_129S1SvImJ_T0032377.1 MGP_129S1SvImJ_G0019159.1 mouse_genomes_project 11 103310577 103311359 + Ttc25 protein_coding retained_intron MGP_129S1SvImJ_T0028081.1 MGP_129S1SvImJ_G0018046.1 mouse_genomes_project 11 9079944 9104067 - Fignl1 protein_coding processed_transcript MGP_129S1SvImJ_T0028082.1 MGP_129S1SvImJ_G0018046.1 mouse_genomes_project 11 9079956 9095597 - Fignl1 protein_coding processed_transcript MGP_129S1SvImJ_T0028083.1 MGP_129S1SvImJ_G0018046.1 mouse_genomes_project 11 9094423 9104104 - MGP_129S1SvImJ_P0028083 Fignl1 protein_coding protein_coding MGP_129S1SvImJ_T0028084.1 MGP_129S1SvImJ_G0018046.1 mouse_genomes_project 11 9094423 9104104 - MGP_129S1SvImJ_P0028084 Fignl1 protein_coding protein_coding MGP_129S1SvImJ_T0028085.1 MGP_129S1SvImJ_G0018046.1 mouse_genomes_project 11 9094423 9104101 - MGP_129S1SvImJ_P0028085 Fignl1 protein_coding protein_coding MGP_129S1SvImJ_T0028086.1 MGP_129S1SvImJ_G0018046.1 mouse_genomes_project 11 9094687 9104074 - MGP_129S1SvImJ_P0028086 Fignl1 protein_coding protein_coding MGP_129S1SvImJ_T0028087.1 MGP_129S1SvImJ_G0018046.1 mouse_genomes_project 11 9096832 9104090 - MGP_129S1SvImJ_P0028087 Fignl1 protein_coding protein_coding MGP_129S1SvImJ_T0031429.1 MGP_129S1SvImJ_G0018887.1 mouse_genomes_project 11 87754813 87805060 - MGP_129S1SvImJ_P0031429 Ints2 protein_coding protein_coding MGP_129S1SvImJ_T0031430.1 MGP_129S1SvImJ_G0018887.1 mouse_genomes_project 11 87756220 87804056 - MGP_129S1SvImJ_P0031430 Ints2 protein_coding protein_coding MGP_129S1SvImJ_T0031431.1 MGP_129S1SvImJ_G0018887.1 mouse_genomes_project 11 87761938 87773138 - MGP_129S1SvImJ_P0031431 Ints2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031432.1 MGP_129S1SvImJ_G0018887.1 mouse_genomes_project 11 87768826 87777081 - Ints2 protein_coding retained_intron MGP_129S1SvImJ_T0031433.1 MGP_129S1SvImJ_G0018887.1 mouse_genomes_project 11 87780758 87805051 - Ints2 protein_coding retained_intron MGP_129S1SvImJ_T0031434.1 MGP_129S1SvImJ_G0018887.1 mouse_genomes_project 11 87781698 87784910 - Ints2 protein_coding retained_intron MGP_129S1SvImJ_T0031435.1 MGP_129S1SvImJ_G0018887.1 mouse_genomes_project 11 87797059 87805085 - MGP_129S1SvImJ_P0031435 Ints2 protein_coding protein_coding MGP_129S1SvImJ_T0031436.1 MGP_129S1SvImJ_G0018887.1 mouse_genomes_project 11 87802865 87805064 - MGP_129S1SvImJ_P0031436 Ints2 protein_coding protein_coding MGP_129S1SvImJ_T0031437.1 MGP_129S1SvImJ_G0018887.1 mouse_genomes_project 11 87803535 87805028 - MGP_129S1SvImJ_P0031437 Ints2 protein_coding protein_coding MGP_129S1SvImJ_T0031438.1 MGP_129S1SvImJ_G0018887.1 mouse_genomes_project 11 87803862 87804850 - Ints2 protein_coding retained_intron MGP_129S1SvImJ_T0031439.1 MGP_129S1SvImJ_G0018887.1 mouse_genomes_project 11 87803952 87805075 - Ints2 protein_coding processed_transcript MGP_129S1SvImJ_T0031754.1 MGP_129S1SvImJ_G0018961.1 mouse_genomes_project 11 96662917 96717592 - MGP_129S1SvImJ_P0031754 Acsf2 protein_coding protein_coding MGP_129S1SvImJ_T0031756.1 MGP_129S1SvImJ_G0018961.1 mouse_genomes_project 11 96678784 96717491 - MGP_129S1SvImJ_P0031756 Acsf2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0031757.1 MGP_129S1SvImJ_G0018961.1 mouse_genomes_project 11 96678924 96681351 - Acsf2 protein_coding processed_transcript MGP_129S1SvImJ_T0031758.1 MGP_129S1SvImJ_G0018961.1 mouse_genomes_project 11 96679900 96717490 - Acsf2 protein_coding processed_transcript MGP_129S1SvImJ_T0032285.1 MGP_129S1SvImJ_G0019115.1 mouse_genomes_project 11 102477561 102479782 - MGP_129S1SvImJ_P0032285 Krtap4-8 protein_coding protein_coding MGP_129S1SvImJ_T0099266.1 MGP_129S1SvImJ_G0037333.1 mouse_genomes_project 11 86650673 86650780 + Gm23506 snRNA snRNA MGP_129S1SvImJ_T0009759.1 MGP_129S1SvImJ_G0007875.1 mouse_genomes_project 11 103239720 103239790 - Mir7116 miRNA miRNA MGP_129S1SvImJ_T0030682.1 MGP_129S1SvImJ_G0018704.1 mouse_genomes_project 11 75896185 75901130 - MGP_129S1SvImJ_P0030682 Hic1 protein_coding protein_coding MGP_129S1SvImJ_T0030683.1 MGP_129S1SvImJ_G0018704.1 mouse_genomes_project 11 75898773 75899767 - Hic1 protein_coding processed_transcript MGP_129S1SvImJ_T0012548.1 MGP_129S1SvImJ_G0010637.1 mouse_genomes_project 11 24938050 24938269 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012705.1 MGP_129S1SvImJ_G0010794.1 mouse_genomes_project 11 82007645 82008059 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099220.1 MGP_129S1SvImJ_G0037287.1 mouse_genomes_project 11 2281289 2281396 + Gm25142 snRNA snRNA MGP_129S1SvImJ_T0100513.1 MGP_129S1SvImJ_G0038580.1 mouse_genomes_project 11 71842520 71842779 - snoRNA snoRNA MGP_129S1SvImJ_T0006398.1 MGP_129S1SvImJ_G0005333.1 mouse_genomes_project 11 124955519 124957763 - Gm16755 lincRNA lincRNA MGP_129S1SvImJ_T0099279.1 MGP_129S1SvImJ_G0037346.1 mouse_genomes_project 11 98371230 98371414 - Gm22423 snRNA snRNA MGP_129S1SvImJ_T0006271.1 MGP_129S1SvImJ_G0005241.1 mouse_genomes_project 11 63525658 63530378 + B130011K05Rik lincRNA lincRNA MGP_129S1SvImJ_T0033395.1 MGP_129S1SvImJ_G0019375.1 mouse_genomes_project 11 119189515 119250837 + MGP_129S1SvImJ_P0033395 Tmem104 protein_coding protein_coding MGP_129S1SvImJ_T0033396.1 MGP_129S1SvImJ_G0019375.1 mouse_genomes_project 11 119189515 119250837 + MGP_129S1SvImJ_P0033396 Tmem104 protein_coding protein_coding MGP_129S1SvImJ_T0033397.1 MGP_129S1SvImJ_G0019375.1 mouse_genomes_project 11 119189539 119198280 + Tmem104 protein_coding processed_transcript MGP_129S1SvImJ_T0033398.1 MGP_129S1SvImJ_G0019375.1 mouse_genomes_project 11 119189579 119249579 + Tmem104 protein_coding processed_transcript MGP_129S1SvImJ_T0030955.1 MGP_129S1SvImJ_G0018761.1 mouse_genomes_project 11 78999918 79024795 + MGP_129S1SvImJ_P0030955 Flot2 protein_coding protein_coding MGP_129S1SvImJ_T0030956.1 MGP_129S1SvImJ_G0018761.1 mouse_genomes_project 11 78999918 79024795 + MGP_129S1SvImJ_P0030956 Flot2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030957.1 MGP_129S1SvImJ_G0018761.1 mouse_genomes_project 11 78999928 79024792 + MGP_129S1SvImJ_P0030957 Flot2 protein_coding protein_coding MGP_129S1SvImJ_T0030958.1 MGP_129S1SvImJ_G0018761.1 mouse_genomes_project 11 78999971 79024795 + MGP_129S1SvImJ_P0030958 Flot2 protein_coding protein_coding MGP_129S1SvImJ_T0030959.1 MGP_129S1SvImJ_G0018761.1 mouse_genomes_project 11 79002291 79024795 + Flot2 protein_coding processed_transcript MGP_129S1SvImJ_T0003292.1 MGP_129S1SvImJ_G0003044.1 mouse_genomes_project 11 98602837 98618617 - Hoxb5os antisense antisense MGP_129S1SvImJ_T0003293.1 MGP_129S1SvImJ_G0003044.1 mouse_genomes_project 11 98605280 98616788 - Hoxb5os antisense antisense MGP_129S1SvImJ_T0032263.1 MGP_129S1SvImJ_G0019095.1 mouse_genomes_project 11 102182639 102189855 - MGP_129S1SvImJ_P0032263 Krt39 protein_coding protein_coding MGP_129S1SvImJ_T0032264.1 MGP_129S1SvImJ_G0019095.1 mouse_genomes_project 11 102183149 102189775 - MGP_129S1SvImJ_P0032264 Krt39 protein_coding protein_coding MGP_129S1SvImJ_T0028630.1 MGP_129S1SvImJ_G0018175.1 mouse_genomes_project 11 42363568 42365570 + MGP_129S1SvImJ_P0028630 4933415A04Rik protein_coding protein_coding MGP_129S1SvImJ_T0031469.1 MGP_129S1SvImJ_G0018894.1 mouse_genomes_project 11 88268494 88334972 - MGP_129S1SvImJ_P0031469 Cltc protein_coding protein_coding MGP_129S1SvImJ_T0031470.1 MGP_129S1SvImJ_G0018894.1 mouse_genomes_project 11 88268798 88334908 - MGP_129S1SvImJ_P0031470 Cltc protein_coding protein_coding MGP_129S1SvImJ_T0031471.1 MGP_129S1SvImJ_G0018894.1 mouse_genomes_project 11 88269462 88277856 - MGP_129S1SvImJ_P0031471 Cltc protein_coding protein_coding MGP_129S1SvImJ_T0031472.1 MGP_129S1SvImJ_G0018894.1 mouse_genomes_project 11 88275097 88276590 - Cltc protein_coding processed_transcript MGP_129S1SvImJ_T0031473.1 MGP_129S1SvImJ_G0018894.1 mouse_genomes_project 11 88298497 88301731 - Cltc protein_coding retained_intron MGP_129S1SvImJ_T0031474.1 MGP_129S1SvImJ_G0018894.1 mouse_genomes_project 11 88299446 88301700 - Cltc protein_coding processed_transcript MGP_129S1SvImJ_T0032165.1 MGP_129S1SvImJ_G0019067.1 mouse_genomes_project 11 101255995 101269270 + MGP_129S1SvImJ_P0032165 Gsdma protein_coding protein_coding MGP_129S1SvImJ_T0009683.1 MGP_129S1SvImJ_G0007799.1 mouse_genomes_project 11 45074468 45074525 + Mir7239 miRNA miRNA MGP_129S1SvImJ_T0031104.1 MGP_129S1SvImJ_G0018797.1 mouse_genomes_project 11 80605811 80608914 - MGP_129S1SvImJ_P0031104 Omg protein_coding protein_coding MGP_129S1SvImJ_T0029245.1 MGP_129S1SvImJ_G0018349.1 mouse_genomes_project 11 58003163 58011379 - MGP_129S1SvImJ_P0029245 Zfp672 protein_coding protein_coding MGP_129S1SvImJ_T0029246.1 MGP_129S1SvImJ_G0018349.1 mouse_genomes_project 11 58003173 58011356 - MGP_129S1SvImJ_P0029246 Zfp672 protein_coding protein_coding MGP_129S1SvImJ_T0029247.1 MGP_129S1SvImJ_G0018349.1 mouse_genomes_project 11 58003264 58011146 - MGP_129S1SvImJ_P0029247 Zfp672 protein_coding protein_coding MGP_129S1SvImJ_T0029248.1 MGP_129S1SvImJ_G0018349.1 mouse_genomes_project 11 58005273 58020574 - MGP_129S1SvImJ_P0029248 Zfp672 protein_coding protein_coding MGP_129S1SvImJ_T0029249.1 MGP_129S1SvImJ_G0018349.1 mouse_genomes_project 11 58005375 58007995 - MGP_129S1SvImJ_P0029249 Zfp672 protein_coding protein_coding MGP_129S1SvImJ_T0029250.1 MGP_129S1SvImJ_G0018349.1 mouse_genomes_project 11 58007744 58011347 - Zfp672 protein_coding processed_transcript MGP_129S1SvImJ_T0029251.1 MGP_129S1SvImJ_G0018349.1 mouse_genomes_project 11 58007778 58011347 - Zfp672 protein_coding processed_transcript MGP_129S1SvImJ_T0029252.1 MGP_129S1SvImJ_G0018349.1 mouse_genomes_project 11 58017454 58020582 - Zfp672 protein_coding retained_intron MGP_129S1SvImJ_T0029253.1 MGP_129S1SvImJ_G0018349.1 mouse_genomes_project 11 58017959 58020582 - MGP_129S1SvImJ_P0029253 Zfp672 protein_coding protein_coding MGP_129S1SvImJ_T0029259.1 MGP_129S1SvImJ_G0018351.1 mouse_genomes_project 11 58102245 58115044 + MGP_129S1SvImJ_P0029259 Lypd8 protein_coding protein_coding MGP_129S1SvImJ_T0029260.1 MGP_129S1SvImJ_G0018351.1 mouse_genomes_project 11 58102245 58114853 + MGP_129S1SvImJ_P0029260 Lypd8 protein_coding protein_coding MGP_129S1SvImJ_T0009749.1 MGP_129S1SvImJ_G0007865.1 mouse_genomes_project 11 99204891 99204964 + Mir152 miRNA miRNA MGP_129S1SvImJ_T0033399.1 MGP_129S1SvImJ_G0019376.1 mouse_genomes_project 11 119254686 119270935 - MGP_129S1SvImJ_P0033399 Grin2c protein_coding protein_coding MGP_129S1SvImJ_T0033400.1 MGP_129S1SvImJ_G0019376.1 mouse_genomes_project 11 119254686 119272749 - MGP_129S1SvImJ_P0033400 Grin2c protein_coding protein_coding MGP_129S1SvImJ_T0099259.1 MGP_129S1SvImJ_G0037326.1 mouse_genomes_project 11 79871288 79871375 + Gm23219 snRNA snRNA MGP_129S1SvImJ_T0032115.1 MGP_129S1SvImJ_G0019054.1 mouse_genomes_project 11 100884727 100895583 + MGP_129S1SvImJ_P0032115 Ppp1r1b protein_coding protein_coding MGP_129S1SvImJ_T0032116.1 MGP_129S1SvImJ_G0019054.1 mouse_genomes_project 11 100886488 100895568 + Ppp1r1b protein_coding retained_intron MGP_129S1SvImJ_T0032117.1 MGP_129S1SvImJ_G0019054.1 mouse_genomes_project 11 100886848 100895171 + Ppp1r1b protein_coding retained_intron MGP_129S1SvImJ_T0032118.1 MGP_129S1SvImJ_G0019054.1 mouse_genomes_project 11 100887122 100895066 + Ppp1r1b protein_coding processed_transcript MGP_129S1SvImJ_T0032119.1 MGP_129S1SvImJ_G0019054.1 mouse_genomes_project 11 100890229 100894883 + Ppp1r1b protein_coding processed_transcript MGP_129S1SvImJ_T0012566.1 MGP_129S1SvImJ_G0010655.1 mouse_genomes_project 11 28935924 28936286 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0030988.1 MGP_129S1SvImJ_G0018768.1 mouse_genomes_project 11 79170046 79173442 + MGP_129S1SvImJ_P0030988 Rab34 protein_coding protein_coding MGP_129S1SvImJ_T0030989.1 MGP_129S1SvImJ_G0018768.1 mouse_genomes_project 11 79170485 79173789 + MGP_129S1SvImJ_P0030989 Rab34 protein_coding protein_coding MGP_129S1SvImJ_T0030990.1 MGP_129S1SvImJ_G0018768.1 mouse_genomes_project 11 79170846 79171913 + Rab34 protein_coding retained_intron MGP_129S1SvImJ_T0030991.1 MGP_129S1SvImJ_G0018768.1 mouse_genomes_project 11 79170943 79173800 + MGP_129S1SvImJ_P0030991 Rab34 protein_coding protein_coding MGP_129S1SvImJ_T0030992.1 MGP_129S1SvImJ_G0018768.1 mouse_genomes_project 11 79171194 79172718 + Rab34 protein_coding retained_intron MGP_129S1SvImJ_T0030993.1 MGP_129S1SvImJ_G0018768.1 mouse_genomes_project 11 79171959 79172537 + Rab34 protein_coding retained_intron MGP_129S1SvImJ_T0012714.1 MGP_129S1SvImJ_G0010803.1 mouse_genomes_project 11 86574869 86575278 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032324.1 MGP_129S1SvImJ_G0019146.1 mouse_genomes_project 11 103001323 103006439 - MGP_129S1SvImJ_P0032324 Krt16 protein_coding protein_coding MGP_129S1SvImJ_T0030375.1 MGP_129S1SvImJ_G0018616.1 mouse_genomes_project 11 71353607 71376531 - MGP_129S1SvImJ_P0030375 Scimp protein_coding protein_coding MGP_129S1SvImJ_T0012800.1 MGP_129S1SvImJ_G0010889.1 mouse_genomes_project 11 125531584 125531877 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012469.1 MGP_129S1SvImJ_G0010558.1 mouse_genomes_project 11 509377 509749 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012470.1 MGP_129S1SvImJ_G0010559.1 mouse_genomes_project 11 513743 514581 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032462.1 MGP_129S1SvImJ_G0019178.1 mouse_genomes_project 11 103892586 103897441 + MGP_129S1SvImJ_P0032462 Coasy protein_coding protein_coding MGP_129S1SvImJ_T0032463.1 MGP_129S1SvImJ_G0019178.1 mouse_genomes_project 11 103892639 103896442 + Coasy protein_coding processed_transcript MGP_129S1SvImJ_T0032464.1 MGP_129S1SvImJ_G0019178.1 mouse_genomes_project 11 103892646 103897441 + MGP_129S1SvImJ_P0032464 Coasy protein_coding protein_coding MGP_129S1SvImJ_T0032465.1 MGP_129S1SvImJ_G0019178.1 mouse_genomes_project 11 103893916 103895201 + Coasy protein_coding processed_transcript MGP_129S1SvImJ_T0006291.1 MGP_129S1SvImJ_G0005256.1 mouse_genomes_project 11 72521840 72533460 - 4930401O10Rik lincRNA lincRNA MGP_129S1SvImJ_T0033407.1 MGP_129S1SvImJ_G0019379.1 mouse_genomes_project 11 119324880 119350273 + MGP_129S1SvImJ_P0033407 Otop2 protein_coding protein_coding MGP_129S1SvImJ_T0033409.1 MGP_129S1SvImJ_G0019379.1 mouse_genomes_project 11 119340520 119341502 + Otop2 protein_coding processed_transcript MGP_129S1SvImJ_T0033410.1 MGP_129S1SvImJ_G0019379.1 mouse_genomes_project 11 119340751 119341495 + Otop2 protein_coding processed_transcript MGP_129S1SvImJ_T0033411.1 MGP_129S1SvImJ_G0019379.1 mouse_genomes_project 11 119340915 119350273 + MGP_129S1SvImJ_P0033411 Otop2 protein_coding protein_coding MGP_129S1SvImJ_T0028585.1 MGP_129S1SvImJ_G0018164.1 mouse_genomes_project 11 40396577 40397068 - MGP_129S1SvImJ_P0028585 protein_coding protein_coding MGP_129S1SvImJ_T0006360.1 MGP_129S1SvImJ_G0005303.1 mouse_genomes_project 11 110921966 110940586 - C330019F10Rik lincRNA lincRNA MGP_129S1SvImJ_T0029196.1 MGP_129S1SvImJ_G0018331.1 mouse_genomes_project 11 54976995 54993060 - MGP_129S1SvImJ_P0029196 Atox1 protein_coding protein_coding MGP_129S1SvImJ_T0029197.1 MGP_129S1SvImJ_G0018331.1 mouse_genomes_project 11 54976998 54993018 - Atox1 protein_coding processed_transcript MGP_129S1SvImJ_T0017316.1 MGP_129S1SvImJ_G0015220.1 mouse_genomes_project 11 121665825 121681668 + Gm11732 processed_transcript processed_transcript MGP_129S1SvImJ_T0028878.1 MGP_129S1SvImJ_G0018250.1 mouse_genomes_project 11 49571388 49615955 - MGP_129S1SvImJ_P0028878 Rufy1 protein_coding protein_coding MGP_129S1SvImJ_T0028879.1 MGP_129S1SvImJ_G0018250.1 mouse_genomes_project 11 49571475 49598090 - Rufy1 protein_coding processed_transcript MGP_129S1SvImJ_T0028880.1 MGP_129S1SvImJ_G0018250.1 mouse_genomes_project 11 49589975 49606821 - Rufy1 protein_coding processed_transcript MGP_129S1SvImJ_T0029937.1 MGP_129S1SvImJ_G0018524.1 mouse_genomes_project 11 69630541 69653179 - MGP_129S1SvImJ_P0029937 Gucy2e protein_coding protein_coding MGP_129S1SvImJ_T0029938.1 MGP_129S1SvImJ_G0018524.1 mouse_genomes_project 11 69630544 69653179 - MGP_129S1SvImJ_P0029938 Gucy2e protein_coding protein_coding MGP_129S1SvImJ_T0029939.1 MGP_129S1SvImJ_G0018524.1 mouse_genomes_project 11 69633579 69653194 - MGP_129S1SvImJ_P0029939 Gucy2e protein_coding protein_coding MGP_129S1SvImJ_T0029940.1 MGP_129S1SvImJ_G0018524.1 mouse_genomes_project 11 69642861 69653179 - Gucy2e protein_coding processed_transcript MGP_129S1SvImJ_T0028962.1 MGP_129S1SvImJ_G0018275.1 mouse_genomes_project 11 50946166 51025096 - MGP_129S1SvImJ_P0028962 Sec24a protein_coding protein_coding MGP_129S1SvImJ_T0028963.1 MGP_129S1SvImJ_G0018275.1 mouse_genomes_project 11 50948536 51024689 - MGP_129S1SvImJ_P0028963 Sec24a protein_coding protein_coding MGP_129S1SvImJ_T0028964.1 MGP_129S1SvImJ_G0018275.1 mouse_genomes_project 11 50981894 51024916 - MGP_129S1SvImJ_P0028964 Sec24a protein_coding protein_coding MGP_129S1SvImJ_T0028965.1 MGP_129S1SvImJ_G0018275.1 mouse_genomes_project 11 50981894 51024909 - MGP_129S1SvImJ_P0028965 Sec24a protein_coding protein_coding MGP_129S1SvImJ_T0028966.1 MGP_129S1SvImJ_G0018275.1 mouse_genomes_project 11 50993971 51025639 - Sec24a protein_coding retained_intron MGP_129S1SvImJ_T0028967.1 MGP_129S1SvImJ_G0018275.1 mouse_genomes_project 11 51006980 51032022 - Sec24a protein_coding retained_intron MGP_129S1SvImJ_T0031802.1 MGP_129S1SvImJ_G0018976.1 mouse_genomes_project 11 97230314 97254624 - MGP_129S1SvImJ_P0031802 Itga3 protein_coding protein_coding MGP_129S1SvImJ_T0031803.1 MGP_129S1SvImJ_G0018976.1 mouse_genomes_project 11 97230314 97262140 - MGP_129S1SvImJ_P0031803 Itga3 protein_coding protein_coding MGP_129S1SvImJ_T0031804.1 MGP_129S1SvImJ_G0018976.1 mouse_genomes_project 11 97230314 97262227 - MGP_129S1SvImJ_P0031804 Itga3 protein_coding protein_coding MGP_129S1SvImJ_T0031805.1 MGP_129S1SvImJ_G0018976.1 mouse_genomes_project 11 97239098 97241869 - Itga3 protein_coding retained_intron MGP_129S1SvImJ_T0031806.1 MGP_129S1SvImJ_G0018976.1 mouse_genomes_project 11 97243938 97247799 - Itga3 protein_coding retained_intron MGP_129S1SvImJ_T0031807.1 MGP_129S1SvImJ_G0018976.1 mouse_genomes_project 11 97248688 97262223 - MGP_129S1SvImJ_P0031807 Itga3 protein_coding protein_coding MGP_129S1SvImJ_T0032076.1 MGP_129S1SvImJ_G0019044.1 mouse_genomes_project 11 100336130 100337857 - Fbxo47 protein_coding retained_intron MGP_129S1SvImJ_T0032077.1 MGP_129S1SvImJ_G0019044.1 mouse_genomes_project 11 100336130 100369583 - MGP_129S1SvImJ_P0032077 Fbxo47 protein_coding protein_coding MGP_129S1SvImJ_T0009674.1 MGP_129S1SvImJ_G0007790.1 mouse_genomes_project 11 26742493 26742565 + Mir216a miRNA miRNA MGP_129S1SvImJ_T0032293.1 MGP_129S1SvImJ_G0019123.1 mouse_genomes_project 11 102563661 102564729 - MGP_129S1SvImJ_P0032293 Krtap4-16 protein_coding protein_coding MGP_129S1SvImJ_T0032084.1 MGP_129S1SvImJ_G0019047.1 mouse_genomes_project 11 100490910 100514288 - MGP_129S1SvImJ_P0032084 Cacnb1 protein_coding protein_coding MGP_129S1SvImJ_T0032085.1 MGP_129S1SvImJ_G0019047.1 mouse_genomes_project 11 100492303 100514281 - MGP_129S1SvImJ_P0032085 Cacnb1 protein_coding protein_coding MGP_129S1SvImJ_T0032086.1 MGP_129S1SvImJ_G0019047.1 mouse_genomes_project 11 100495198 100510090 - MGP_129S1SvImJ_P0032086 Cacnb1 protein_coding protein_coding MGP_129S1SvImJ_T0032087.1 MGP_129S1SvImJ_G0019047.1 mouse_genomes_project 11 100495376 100514288 - MGP_129S1SvImJ_P0032087 Cacnb1 protein_coding protein_coding MGP_129S1SvImJ_T0032088.1 MGP_129S1SvImJ_G0019047.1 mouse_genomes_project 11 100495376 100514288 - MGP_129S1SvImJ_P0032088 Cacnb1 protein_coding protein_coding MGP_129S1SvImJ_T0032089.1 MGP_129S1SvImJ_G0019047.1 mouse_genomes_project 11 100500057 100514694 - Cacnb1 protein_coding processed_transcript MGP_129S1SvImJ_T0032090.1 MGP_129S1SvImJ_G0019047.1 mouse_genomes_project 11 100500092 100502987 - Cacnb1 protein_coding processed_transcript MGP_129S1SvImJ_T0033622.1 MGP_129S1SvImJ_G0019416.1 mouse_genomes_project 11 120221368 120228419 - MGP_129S1SvImJ_P0033622 Mrpl38 protein_coding protein_coding MGP_129S1SvImJ_T0033623.1 MGP_129S1SvImJ_G0019416.1 mouse_genomes_project 11 120221372 120228326 - Mrpl38 protein_coding retained_intron MGP_129S1SvImJ_T0033624.1 MGP_129S1SvImJ_G0019416.1 mouse_genomes_project 11 120222336 120228340 - Mrpl38 protein_coding retained_intron MGP_129S1SvImJ_T0033625.1 MGP_129S1SvImJ_G0019416.1 mouse_genomes_project 11 120223612 120224007 - Mrpl38 protein_coding retained_intron MGP_129S1SvImJ_T0033626.1 MGP_129S1SvImJ_G0019416.1 mouse_genomes_project 11 120223806 120224178 - Mrpl38 protein_coding retained_intron MGP_129S1SvImJ_T0033627.1 MGP_129S1SvImJ_G0019416.1 mouse_genomes_project 11 120227332 120228416 - Mrpl38 protein_coding retained_intron MGP_129S1SvImJ_T0011331.1 MGP_129S1SvImJ_G0009447.1 mouse_genomes_project 11 98499507 98499587 - Gm27898 misc_RNA misc_RNA MGP_129S1SvImJ_T0033159.1 MGP_129S1SvImJ_G0019321.1 mouse_genomes_project 11 110962607 110998794 + Helz protein_coding processed_transcript MGP_129S1SvImJ_T0033160.1 MGP_129S1SvImJ_G0019321.1 mouse_genomes_project 11 110962633 111092274 + MGP_129S1SvImJ_P0033160 Helz protein_coding protein_coding MGP_129S1SvImJ_T0033161.1 MGP_129S1SvImJ_G0019321.1 mouse_genomes_project 11 110962637 111106984 + MGP_129S1SvImJ_P0033161 Helz protein_coding protein_coding MGP_129S1SvImJ_T0033162.1 MGP_129S1SvImJ_G0019321.1 mouse_genomes_project 11 110962645 111113841 + MGP_129S1SvImJ_P0033162 Helz protein_coding protein_coding MGP_129S1SvImJ_T0033163.1 MGP_129S1SvImJ_G0019321.1 mouse_genomes_project 11 111047395 111092274 + MGP_129S1SvImJ_P0033163 Helz protein_coding protein_coding MGP_129S1SvImJ_T0033164.1 MGP_129S1SvImJ_G0019321.1 mouse_genomes_project 11 111054610 111066188 + Helz protein_coding processed_transcript MGP_129S1SvImJ_T0033165.1 MGP_129S1SvImJ_G0019321.1 mouse_genomes_project 11 111091038 111092973 + Helz protein_coding processed_transcript MGP_129S1SvImJ_T0033166.1 MGP_129S1SvImJ_G0019321.1 mouse_genomes_project 11 111092938 111106554 + Helz protein_coding processed_transcript MGP_129S1SvImJ_T0029469.1 MGP_129S1SvImJ_G0018422.1 mouse_genomes_project 11 60628600 60629199 - Flii protein_coding retained_intron MGP_129S1SvImJ_T0029470.1 MGP_129S1SvImJ_G0018422.1 mouse_genomes_project 11 60628620 60641739 - MGP_129S1SvImJ_P0029470 Flii protein_coding protein_coding MGP_129S1SvImJ_T0029471.1 MGP_129S1SvImJ_G0018422.1 mouse_genomes_project 11 60633704 60634619 - Flii protein_coding retained_intron MGP_129S1SvImJ_T0029472.1 MGP_129S1SvImJ_G0018422.1 mouse_genomes_project 11 60638840 60641699 - Flii protein_coding retained_intron MGP_129S1SvImJ_T0009701.1 MGP_129S1SvImJ_G0007817.1 mouse_genomes_project 11 64767802 64767948 - Gm24275 miRNA miRNA MGP_129S1SvImJ_T0033070.1 MGP_129S1SvImJ_G0019303.1 mouse_genomes_project 11 109589315 109590910 - MGP_129S1SvImJ_P0033070 Gh protein_coding protein_coding MGP_129S1SvImJ_T0100544.1 MGP_129S1SvImJ_G0038611.1 mouse_genomes_project 11 120820975 120821049 + Snord1a snoRNA snoRNA MGP_129S1SvImJ_T0030603.1 MGP_129S1SvImJ_G0018681.1 mouse_genomes_project 11 74671829 74679752 - MGP_129S1SvImJ_P0030603 Olfr398 protein_coding protein_coding MGP_129S1SvImJ_T0030604.1 MGP_129S1SvImJ_G0018681.1 mouse_genomes_project 11 74671829 74672774 - MGP_129S1SvImJ_P0030604 Olfr398 protein_coding protein_coding MGP_129S1SvImJ_T0012711.1 MGP_129S1SvImJ_G0010800.1 mouse_genomes_project 11 84259786 84260619 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028098.1 MGP_129S1SvImJ_G0018048.1 mouse_genomes_project 11 9241720 9306283 - MGP_129S1SvImJ_P0028098 Grb10 protein_coding protein_coding MGP_129S1SvImJ_T0028099.1 MGP_129S1SvImJ_G0018048.1 mouse_genomes_project 11 9247947 9249846 - Grb10 protein_coding processed_transcript MGP_129S1SvImJ_T0028100.1 MGP_129S1SvImJ_G0018048.1 mouse_genomes_project 11 9256127 9257568 - Grb10 protein_coding processed_transcript MGP_129S1SvImJ_T0028101.1 MGP_129S1SvImJ_G0018048.1 mouse_genomes_project 11 9260837 9267261 - Grb10 protein_coding processed_transcript MGP_129S1SvImJ_T0028102.1 MGP_129S1SvImJ_G0018048.1 mouse_genomes_project 11 9265980 9353448 - MGP_129S1SvImJ_P0028102 Grb10 protein_coding protein_coding MGP_129S1SvImJ_T0028103.1 MGP_129S1SvImJ_G0018048.1 mouse_genomes_project 11 9278776 9341671 - MGP_129S1SvImJ_P0028103 Grb10 protein_coding protein_coding MGP_129S1SvImJ_T0028104.1 MGP_129S1SvImJ_G0018048.1 mouse_genomes_project 11 9278870 9342079 - MGP_129S1SvImJ_P0028104 Grb10 protein_coding protein_coding MGP_129S1SvImJ_T0033319.1 MGP_129S1SvImJ_G0019356.1 mouse_genomes_project 11 118591947 118596541 + MGP_129S1SvImJ_P0033319 Rpl38 protein_coding protein_coding MGP_129S1SvImJ_T0033320.1 MGP_129S1SvImJ_G0019356.1 mouse_genomes_project 11 118591971 118596541 + MGP_129S1SvImJ_P0033320 Rpl38 protein_coding protein_coding MGP_129S1SvImJ_T0033321.1 MGP_129S1SvImJ_G0019356.1 mouse_genomes_project 11 118591993 118596500 + MGP_129S1SvImJ_P0033321 Rpl38 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0033322.1 MGP_129S1SvImJ_G0019356.1 mouse_genomes_project 11 118592032 118596541 + MGP_129S1SvImJ_P0033322 Rpl38 protein_coding protein_coding MGP_129S1SvImJ_T0033323.1 MGP_129S1SvImJ_G0019356.1 mouse_genomes_project 11 118592049 118596541 + MGP_129S1SvImJ_P0033323 Rpl38 protein_coding protein_coding MGP_129S1SvImJ_T0012478.1 MGP_129S1SvImJ_G0010567.1 mouse_genomes_project 11 2698097 2698541 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031197.1 MGP_129S1SvImJ_G0018822.1 mouse_genomes_project 11 83289744 83291558 + MGP_129S1SvImJ_P0031197 Ccl7 protein_coding protein_coding MGP_129S1SvImJ_T0030640.1 MGP_129S1SvImJ_G0018697.1 mouse_genomes_project 11 75374798 75430401 - Pafah1b1 protein_coding retained_intron MGP_129S1SvImJ_T0030641.1 MGP_129S1SvImJ_G0018697.1 mouse_genomes_project 11 75374798 75430745 - MGP_129S1SvImJ_P0030641 Pafah1b1 protein_coding protein_coding MGP_129S1SvImJ_T0030642.1 MGP_129S1SvImJ_G0018697.1 mouse_genomes_project 11 75374799 75430384 - Pafah1b1 protein_coding retained_intron MGP_129S1SvImJ_T0030643.1 MGP_129S1SvImJ_G0018697.1 mouse_genomes_project 11 75374799 75429922 - MGP_129S1SvImJ_P0030643 Pafah1b1 protein_coding protein_coding MGP_129S1SvImJ_T0030644.1 MGP_129S1SvImJ_G0018697.1 mouse_genomes_project 11 75389674 75429235 - MGP_129S1SvImJ_P0030644 Pafah1b1 protein_coding protein_coding MGP_129S1SvImJ_T0012610.1 MGP_129S1SvImJ_G0010699.1 mouse_genomes_project 11 50317867 50319106 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012594.1 MGP_129S1SvImJ_G0010683.1 mouse_genomes_project 11 44692340 44692729 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032544.1 MGP_129S1SvImJ_G0019194.1 mouse_genomes_project 11 104160726 104164520 + MGP_129S1SvImJ_P0032544 Psme3 protein_coding protein_coding MGP_129S1SvImJ_T0032545.1 MGP_129S1SvImJ_G0019194.1 mouse_genomes_project 11 104160726 104168054 + MGP_129S1SvImJ_P0032545 Psme3 protein_coding protein_coding MGP_129S1SvImJ_T0032546.1 MGP_129S1SvImJ_G0019194.1 mouse_genomes_project 11 104161490 104165106 + MGP_129S1SvImJ_P0032546 Psme3 protein_coding protein_coding MGP_129S1SvImJ_T0032547.1 MGP_129S1SvImJ_G0019194.1 mouse_genomes_project 11 104161536 104164536 + Psme3 protein_coding processed_transcript MGP_129S1SvImJ_T0032548.1 MGP_129S1SvImJ_G0019194.1 mouse_genomes_project 11 104164345 104166609 + Psme3 protein_coding processed_transcript MGP_129S1SvImJ_T0017234.1 MGP_129S1SvImJ_G0015178.1 mouse_genomes_project 11 66400008 66543842 + Gm12296 processed_transcript processed_transcript MGP_129S1SvImJ_T0006202.1 MGP_129S1SvImJ_G0005181.1 mouse_genomes_project 11 20281543 20292215 - Gm26829 lincRNA lincRNA MGP_129S1SvImJ_T0033281.1 MGP_129S1SvImJ_G0019348.1 mouse_genomes_project 11 116538333 116543867 + MGP_129S1SvImJ_P0033281 Sox9 protein_coding protein_coding MGP_129S1SvImJ_T0099241.1 MGP_129S1SvImJ_G0037308.1 mouse_genomes_project 11 53933071 53933179 + Gm24198 snRNA snRNA MGP_129S1SvImJ_T0032378.1 MGP_129S1SvImJ_G0019160.1 mouse_genomes_project 11 103337617 103344442 + MGP_129S1SvImJ_P0032378 Cnp protein_coding protein_coding MGP_129S1SvImJ_T0032379.1 MGP_129S1SvImJ_G0019160.1 mouse_genomes_project 11 103337825 103339164 + Cnp protein_coding processed_transcript MGP_129S1SvImJ_T0032380.1 MGP_129S1SvImJ_G0019160.1 mouse_genomes_project 11 103338237 103344442 + Cnp protein_coding processed_transcript MGP_129S1SvImJ_T0032381.1 MGP_129S1SvImJ_G0019160.1 mouse_genomes_project 11 103338604 103354430 + Cnp protein_coding processed_transcript MGP_129S1SvImJ_T0032895.1 MGP_129S1SvImJ_G0019261.1 mouse_genomes_project 11 106277140 106329349 - MGP_129S1SvImJ_P0032895 Map3k14 protein_coding protein_coding MGP_129S1SvImJ_T0032896.1 MGP_129S1SvImJ_G0019261.1 mouse_genomes_project 11 106278183 106279226 - Map3k14 protein_coding processed_transcript MGP_129S1SvImJ_T0032897.1 MGP_129S1SvImJ_G0019261.1 mouse_genomes_project 11 106295533 106300775 - Map3k14 protein_coding processed_transcript MGP_129S1SvImJ_T0032898.1 MGP_129S1SvImJ_G0019261.1 mouse_genomes_project 11 106297835 106298636 - Map3k14 protein_coding processed_transcript MGP_129S1SvImJ_T0102162.1 MGP_129S1SvImJ_G0039997.1 mouse_genomes_project 11 102691828 102692068 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0033206.1 MGP_129S1SvImJ_G0019330.1 mouse_genomes_project 11 112759256 112838964 - MGP_129S1SvImJ_P0033206 Rgs9 protein_coding protein_coding MGP_129S1SvImJ_T0033207.1 MGP_129S1SvImJ_G0019330.1 mouse_genomes_project 11 112759262 112784983 - MGP_129S1SvImJ_P0033207 Rgs9 protein_coding protein_coding MGP_129S1SvImJ_T0033208.1 MGP_129S1SvImJ_G0019330.1 mouse_genomes_project 11 112768934 112838901 - MGP_129S1SvImJ_P0033208 Rgs9 protein_coding protein_coding MGP_129S1SvImJ_T0033209.1 MGP_129S1SvImJ_G0019330.1 mouse_genomes_project 11 112774368 112781797 - Rgs9 protein_coding processed_transcript MGP_129S1SvImJ_T0033210.1 MGP_129S1SvImJ_G0019330.1 mouse_genomes_project 11 112792083 112838941 - MGP_129S1SvImJ_P0033210 Rgs9 protein_coding protein_coding MGP_129S1SvImJ_T0028891.1 MGP_129S1SvImJ_G0018254.1 mouse_genomes_project 11 50043066 50044820 + Grm6 protein_coding processed_transcript MGP_129S1SvImJ_T0028892.1 MGP_129S1SvImJ_G0018254.1 mouse_genomes_project 11 50043066 50059187 + MGP_129S1SvImJ_P0028892 Grm6 protein_coding protein_coding MGP_129S1SvImJ_T0028893.1 MGP_129S1SvImJ_G0018254.1 mouse_genomes_project 11 50043367 50059158 + MGP_129S1SvImJ_P0028893 Grm6 protein_coding protein_coding MGP_129S1SvImJ_T0028894.1 MGP_129S1SvImJ_G0018254.1 mouse_genomes_project 11 50049872 50059189 + Grm6 protein_coding processed_transcript MGP_129S1SvImJ_T0003180.1 MGP_129S1SvImJ_G0002954.1 mouse_genomes_project 11 51581779 51591904 + A630014C17Rik antisense antisense MGP_129S1SvImJ_T0030545.1 MGP_129S1SvImJ_G0018652.1 mouse_genomes_project 11 73808171 73810979 - MGP_129S1SvImJ_P0030545 Gsg2 protein_coding protein_coding MGP_129S1SvImJ_T0029298.1 MGP_129S1SvImJ_G0018376.1 mouse_genomes_project 11 58583700 58585560 + MGP_129S1SvImJ_P0029298 protein_coding protein_coding MGP_129S1SvImJ_T0032473.1 MGP_129S1SvImJ_G0019180.1 mouse_genomes_project 11 103902644 103906258 - MGP_129S1SvImJ_P0032473 Psmc3ip protein_coding protein_coding MGP_129S1SvImJ_T0032474.1 MGP_129S1SvImJ_G0019180.1 mouse_genomes_project 11 103902953 103906222 - Psmc3ip protein_coding retained_intron MGP_129S1SvImJ_T0032475.1 MGP_129S1SvImJ_G0019180.1 mouse_genomes_project 11 103902978 103904982 - Psmc3ip protein_coding retained_intron MGP_129S1SvImJ_T0032476.1 MGP_129S1SvImJ_G0019180.1 mouse_genomes_project 11 103903308 103906198 - MGP_129S1SvImJ_P0032476 Psmc3ip protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0098452.1 MGP_129S1SvImJ_G0036537.1 mouse_genomes_project 11 72896759 72896875 + n-R5s70 rRNA rRNA MGP_129S1SvImJ_T0029627.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62336513 62498558 - MGP_129S1SvImJ_P0029627 Ncor1 protein_coding protein_coding MGP_129S1SvImJ_T0029628.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62336513 62472970 - MGP_129S1SvImJ_P0029628 Ncor1 protein_coding protein_coding MGP_129S1SvImJ_T0029629.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62338102 62407602 - MGP_129S1SvImJ_P0029629 Ncor1 protein_coding protein_coding MGP_129S1SvImJ_T0029630.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62339013 62342423 - MGP_129S1SvImJ_P0029630 Ncor1 protein_coding protein_coding MGP_129S1SvImJ_T0029631.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62339209 62381588 - MGP_129S1SvImJ_P0029631 Ncor1 protein_coding protein_coding MGP_129S1SvImJ_T0029632.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62339209 62472936 - MGP_129S1SvImJ_P0029632 Ncor1 protein_coding protein_coding MGP_129S1SvImJ_T0029633.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62339209 62380810 - MGP_129S1SvImJ_P0029633 Ncor1 protein_coding protein_coding MGP_129S1SvImJ_T0029634.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62346488 62351216 - Ncor1 protein_coding retained_intron MGP_129S1SvImJ_T0029635.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62346738 62351340 - Ncor1 protein_coding retained_intron MGP_129S1SvImJ_T0029636.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62348361 62352114 - Ncor1 protein_coding retained_intron MGP_129S1SvImJ_T0029637.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62361641 62366681 - Ncor1 protein_coding retained_intron MGP_129S1SvImJ_T0029638.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62364205 62373187 - Ncor1 protein_coding processed_transcript MGP_129S1SvImJ_T0029639.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62366564 62422573 - MGP_129S1SvImJ_P0029639 Ncor1 protein_coding protein_coding MGP_129S1SvImJ_T0029640.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62375702 62394224 - Ncor1 protein_coding processed_transcript MGP_129S1SvImJ_T0029641.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62389782 62472970 - Ncor1 protein_coding retained_intron MGP_129S1SvImJ_T0029642.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62402388 62412305 - MGP_129S1SvImJ_P0029642 Ncor1 protein_coding protein_coding MGP_129S1SvImJ_T0029643.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62402433 62413994 - MGP_129S1SvImJ_P0029643 Ncor1 protein_coding protein_coding MGP_129S1SvImJ_T0029644.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62402453 62412454 - MGP_129S1SvImJ_P0029644 Ncor1 protein_coding protein_coding MGP_129S1SvImJ_T0029645.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62402455 62499032 - MGP_129S1SvImJ_P0029645 Ncor1 protein_coding protein_coding MGP_129S1SvImJ_T0029646.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62405682 62412363 - Ncor1 protein_coding retained_intron MGP_129S1SvImJ_T0029647.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62413907 62472970 - MGP_129S1SvImJ_P0029647 Ncor1 protein_coding protein_coding MGP_129S1SvImJ_T0029648.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62421962 62425144 - Ncor1 protein_coding retained_intron MGP_129S1SvImJ_T0029649.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62425137 62431726 - Ncor1 protein_coding retained_intron MGP_129S1SvImJ_T0029650.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62433596 62498549 - MGP_129S1SvImJ_P0029650 Ncor1 protein_coding protein_coding MGP_129S1SvImJ_T0029651.1 MGP_129S1SvImJ_G0018453.1 mouse_genomes_project 11 62451780 62499767 - MGP_129S1SvImJ_P0029651 Ncor1 protein_coding protein_coding MGP_129S1SvImJ_T0028619.1 MGP_129S1SvImJ_G0018172.1 mouse_genomes_project 11 42195441 42199973 + MGP_129S1SvImJ_P0028619 Slu7 protein_coding protein_coding MGP_129S1SvImJ_T0028620.1 MGP_129S1SvImJ_G0018172.1 mouse_genomes_project 11 42195441 42207038 + MGP_129S1SvImJ_P0028620 Slu7 protein_coding protein_coding MGP_129S1SvImJ_T0028621.1 MGP_129S1SvImJ_G0018172.1 mouse_genomes_project 11 42195456 42209634 + MGP_129S1SvImJ_P0028621 Slu7 protein_coding protein_coding MGP_129S1SvImJ_T0028622.1 MGP_129S1SvImJ_G0018172.1 mouse_genomes_project 11 42199039 42209634 + MGP_129S1SvImJ_P0028622 Slu7 protein_coding protein_coding MGP_129S1SvImJ_T0028623.1 MGP_129S1SvImJ_G0018172.1 mouse_genomes_project 11 42199071 42200906 + Slu7 protein_coding processed_transcript MGP_129S1SvImJ_T0028624.1 MGP_129S1SvImJ_G0018172.1 mouse_genomes_project 11 42203059 42204285 + Slu7 protein_coding processed_transcript MGP_129S1SvImJ_T0033683.1 MGP_129S1SvImJ_G0019428.1 mouse_genomes_project 11 120550856 120565747 - MGP_129S1SvImJ_P0033683 Qrich2 protein_coding protein_coding MGP_129S1SvImJ_T0033684.1 MGP_129S1SvImJ_G0019428.1 mouse_genomes_project 11 120550858 120566637 - MGP_129S1SvImJ_P0033684 Qrich2 protein_coding protein_coding MGP_129S1SvImJ_T0033685.1 MGP_129S1SvImJ_G0019428.1 mouse_genomes_project 11 120554033 120558377 - Qrich2 protein_coding retained_intron MGP_129S1SvImJ_T0029083.1 MGP_129S1SvImJ_G0018306.1 mouse_genomes_project 11 53201781 53217932 - Gm12216 protein_coding processed_transcript MGP_129S1SvImJ_T0029084.1 MGP_129S1SvImJ_G0018306.1 mouse_genomes_project 11 53202654 53282504 - Gm12216 protein_coding processed_transcript MGP_129S1SvImJ_T0029085.1 MGP_129S1SvImJ_G0018306.1 mouse_genomes_project 11 53205269 53282616 - MGP_129S1SvImJ_P0029085 Gm12216 protein_coding protein_coding MGP_129S1SvImJ_T0029086.1 MGP_129S1SvImJ_G0018306.1 mouse_genomes_project 11 53225669 53282589 - Gm12216 protein_coding processed_transcript MGP_129S1SvImJ_T0029087.1 MGP_129S1SvImJ_G0018306.1 mouse_genomes_project 11 53231200 53282616 - MGP_129S1SvImJ_P0029087 Gm12216 protein_coding protein_coding MGP_129S1SvImJ_T0029088.1 MGP_129S1SvImJ_G0018306.1 mouse_genomes_project 11 53234902 53282616 - MGP_129S1SvImJ_P0029088 Gm12216 protein_coding protein_coding MGP_129S1SvImJ_T0012587.1 MGP_129S1SvImJ_G0010676.1 mouse_genomes_project 11 40263246 40264159 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006336.1 MGP_129S1SvImJ_G0005286.1 mouse_genomes_project 11 97414852 97417204 - Gm11515 lincRNA lincRNA MGP_129S1SvImJ_T0003275.1 MGP_129S1SvImJ_G0003031.1 mouse_genomes_project 11 89684314 89728775 - Gm11508 antisense antisense MGP_129S1SvImJ_T0029014.1 MGP_129S1SvImJ_G0018287.1 mouse_genomes_project 11 52622736 52672290 - MGP_129S1SvImJ_P0029014 Hspa4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0029015.1 MGP_129S1SvImJ_G0018287.1 mouse_genomes_project 11 52622737 52672581 - MGP_129S1SvImJ_P0029015 Hspa4 protein_coding protein_coding MGP_129S1SvImJ_T0029016.1 MGP_129S1SvImJ_G0018287.1 mouse_genomes_project 11 52627229 52632716 - Hspa4 protein_coding retained_intron MGP_129S1SvImJ_T0029017.1 MGP_129S1SvImJ_G0018287.1 mouse_genomes_project 11 52629721 52672535 - Hspa4 protein_coding processed_transcript MGP_129S1SvImJ_T0030425.1 MGP_129S1SvImJ_G0018622.1 mouse_genomes_project 11 71583060 71597543 - MGP_129S1SvImJ_P0030425 Derl2 protein_coding protein_coding MGP_129S1SvImJ_T0030426.1 MGP_129S1SvImJ_G0018622.1 mouse_genomes_project 11 71584147 71597549 - MGP_129S1SvImJ_P0030426 Derl2 protein_coding protein_coding MGP_129S1SvImJ_T0030427.1 MGP_129S1SvImJ_G0018622.1 mouse_genomes_project 11 71587335 71597576 - MGP_129S1SvImJ_P0030427 Derl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030428.1 MGP_129S1SvImJ_G0018622.1 mouse_genomes_project 11 71589106 71597550 - Derl2 protein_coding retained_intron MGP_129S1SvImJ_T0030429.1 MGP_129S1SvImJ_G0018622.1 mouse_genomes_project 11 71591425 71597582 - MGP_129S1SvImJ_P0030429 Derl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030430.1 MGP_129S1SvImJ_G0018622.1 mouse_genomes_project 11 71592869 71597519 - MGP_129S1SvImJ_P0030430 Derl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030075.1 MGP_129S1SvImJ_G0018558.1 mouse_genomes_project 11 70304067 70305372 - MGP_129S1SvImJ_P0030075 Spem1 protein_coding protein_coding MGP_129S1SvImJ_T0033681.1 MGP_129S1SvImJ_G0019427.1 mouse_genomes_project 11 120541647 120547905 + MGP_129S1SvImJ_P0033681 protein_coding protein_coding MGP_129S1SvImJ_T0033170.1 MGP_129S1SvImJ_G0019324.1 mouse_genomes_project 11 111310253 111347456 - MGP_129S1SvImJ_P0033170 Cacng5 protein_coding protein_coding MGP_129S1SvImJ_T0033171.1 MGP_129S1SvImJ_G0019324.1 mouse_genomes_project 11 111310319 111351211 - MGP_129S1SvImJ_P0033171 Cacng5 protein_coding protein_coding MGP_129S1SvImJ_T0017168.1 MGP_129S1SvImJ_G0015145.1 mouse_genomes_project 11 154829 182798 - Gm12592 processed_transcript processed_transcript MGP_129S1SvImJ_T0032503.1 MGP_129S1SvImJ_G0019188.1 mouse_genomes_project 11 104086844 104089067 + MGP_129S1SvImJ_P0032503 Ramp2 protein_coding protein_coding MGP_129S1SvImJ_T0032504.1 MGP_129S1SvImJ_G0019188.1 mouse_genomes_project 11 104087128 104088501 + Ramp2 protein_coding retained_intron MGP_129S1SvImJ_T0032505.1 MGP_129S1SvImJ_G0019188.1 mouse_genomes_project 11 104087207 104102691 + MGP_129S1SvImJ_P0032505 Ramp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032506.1 MGP_129S1SvImJ_G0019188.1 mouse_genomes_project 11 104087245 104089067 + MGP_129S1SvImJ_P0032506 Ramp2 protein_coding protein_coding MGP_129S1SvImJ_T0032507.1 MGP_129S1SvImJ_G0019188.1 mouse_genomes_project 11 104087248 104089067 + MGP_129S1SvImJ_P0032507 Ramp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032508.1 MGP_129S1SvImJ_G0019188.1 mouse_genomes_project 11 104087383 104088453 + MGP_129S1SvImJ_P0032508 Ramp2 protein_coding protein_coding MGP_129S1SvImJ_T0032509.1 MGP_129S1SvImJ_G0019188.1 mouse_genomes_project 11 104087749 104089067 + Ramp2 protein_coding retained_intron MGP_129S1SvImJ_T0032510.1 MGP_129S1SvImJ_G0019188.1 mouse_genomes_project 11 104087909 104088881 + MGP_129S1SvImJ_P0032510 Ramp2 protein_coding protein_coding MGP_129S1SvImJ_T0030615.1 MGP_129S1SvImJ_G0018687.1 mouse_genomes_project 11 74875475 74890247 + MGP_129S1SvImJ_P0030615 protein_coding protein_coding MGP_129S1SvImJ_T0030616.1 MGP_129S1SvImJ_G0018687.1 mouse_genomes_project 11 74875499 74884909 + protein_coding processed_transcript MGP_129S1SvImJ_T0030617.1 MGP_129S1SvImJ_G0018687.1 mouse_genomes_project 11 74887170 74890247 + MGP_129S1SvImJ_P0030617 protein_coding protein_coding MGP_129S1SvImJ_T0031134.1 MGP_129S1SvImJ_G0018805.1 mouse_genomes_project 11 81224962 81280108 + MGP_129S1SvImJ_P0031134 Atad5 protein_coding protein_coding MGP_129S1SvImJ_T0031135.1 MGP_129S1SvImJ_G0018805.1 mouse_genomes_project 11 81224962 81280111 + MGP_129S1SvImJ_P0031135 Atad5 protein_coding protein_coding MGP_129S1SvImJ_T0031136.1 MGP_129S1SvImJ_G0018805.1 mouse_genomes_project 11 81237366 81280111 + Atad5 protein_coding processed_transcript MGP_129S1SvImJ_T0031137.1 MGP_129S1SvImJ_G0018805.1 mouse_genomes_project 11 81238485 81243997 + Atad5 protein_coding retained_intron MGP_129S1SvImJ_T0029932.1 MGP_129S1SvImJ_G0018522.1 mouse_genomes_project 11 69566493 69580174 + MGP_129S1SvImJ_P0029932 Alox12b protein_coding protein_coding MGP_129S1SvImJ_T0003346.1 MGP_129S1SvImJ_G0003089.1 mouse_genomes_project 11 111639384 111651624 + Gm11655 antisense antisense MGP_129S1SvImJ_T0009782.1 MGP_129S1SvImJ_G0007898.1 mouse_genomes_project 11 123510216 123510278 - Mir6934 miRNA miRNA MGP_129S1SvImJ_T0006385.1 MGP_129S1SvImJ_G0005322.1 mouse_genomes_project 11 121252065 121253930 + Gm11731 lincRNA lincRNA MGP_129S1SvImJ_T0027975.1 MGP_129S1SvImJ_G0018020.1 mouse_genomes_project 11 3392709 3461993 + MGP_129S1SvImJ_P0027975 Ogdh protein_coding unknown_likely_coding MGP_129S1SvImJ_T0027976.1 MGP_129S1SvImJ_G0018020.1 mouse_genomes_project 11 3392714 3462960 + MGP_129S1SvImJ_P0027976 Ogdh protein_coding protein_coding MGP_129S1SvImJ_T0027977.1 MGP_129S1SvImJ_G0018020.1 mouse_genomes_project 11 3392722 3398924 + Ogdh protein_coding retained_intron MGP_129S1SvImJ_T0027978.1 MGP_129S1SvImJ_G0018020.1 mouse_genomes_project 11 3392747 3462896 + MGP_129S1SvImJ_P0027978 Ogdh protein_coding protein_coding MGP_129S1SvImJ_T0027979.1 MGP_129S1SvImJ_G0018020.1 mouse_genomes_project 11 3392749 3462910 + MGP_129S1SvImJ_P0027979 Ogdh protein_coding protein_coding MGP_129S1SvImJ_T0027980.1 MGP_129S1SvImJ_G0018020.1 mouse_genomes_project 11 3393066 3416150 + MGP_129S1SvImJ_P0027980 Ogdh protein_coding protein_coding MGP_129S1SvImJ_T0027981.1 MGP_129S1SvImJ_G0018020.1 mouse_genomes_project 11 3393253 3416034 + MGP_129S1SvImJ_P0027981 Ogdh protein_coding protein_coding MGP_129S1SvImJ_T0027982.1 MGP_129S1SvImJ_G0018020.1 mouse_genomes_project 11 3393686 3462910 + MGP_129S1SvImJ_P0027982 Ogdh protein_coding protein_coding MGP_129S1SvImJ_T0032525.1 MGP_129S1SvImJ_G0019192.1 mouse_genomes_project 11 104122170 104131000 + Cntd1 protein_coding processed_transcript MGP_129S1SvImJ_T0032526.1 MGP_129S1SvImJ_G0019192.1 mouse_genomes_project 11 104122254 104133156 + MGP_129S1SvImJ_P0032526 Cntd1 protein_coding protein_coding MGP_129S1SvImJ_T0032527.1 MGP_129S1SvImJ_G0019192.1 mouse_genomes_project 11 104130509 104140773 + Cntd1 protein_coding processed_transcript MGP_129S1SvImJ_T0029676.1 MGP_129S1SvImJ_G0018460.1 mouse_genomes_project 11 62765198 62801061 - MGP_129S1SvImJ_P0029676 Zfp287 protein_coding protein_coding MGP_129S1SvImJ_T0029677.1 MGP_129S1SvImJ_G0018460.1 mouse_genomes_project 11 62779416 62801056 - MGP_129S1SvImJ_P0029677 Zfp287 protein_coding protein_coding MGP_129S1SvImJ_T0029678.1 MGP_129S1SvImJ_G0018460.1 mouse_genomes_project 11 62790801 62797847 - MGP_129S1SvImJ_P0029678 Zfp287 protein_coding protein_coding MGP_129S1SvImJ_T0029679.1 MGP_129S1SvImJ_G0018460.1 mouse_genomes_project 11 62795897 62801081 - Zfp287 protein_coding retained_intron MGP_129S1SvImJ_T0012636.1 MGP_129S1SvImJ_G0010725.1 mouse_genomes_project 11 57863495 57864769 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029652.1 MGP_129S1SvImJ_G0018454.1 mouse_genomes_project 11 62499685 62560252 + MGP_129S1SvImJ_P0029652 Pigl protein_coding protein_coding MGP_129S1SvImJ_T0029653.1 MGP_129S1SvImJ_G0018454.1 mouse_genomes_project 11 62499833 62558073 + Pigl protein_coding processed_transcript MGP_129S1SvImJ_T0012671.1 MGP_129S1SvImJ_G0010760.1 mouse_genomes_project 11 70890113 70890757 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003317.1 MGP_129S1SvImJ_G0003062.1 mouse_genomes_project 11 104184461 104194082 - Gm28156 antisense antisense MGP_129S1SvImJ_T0012630.1 MGP_129S1SvImJ_G0010719.1 mouse_genomes_project 11 55840350 55840579 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099245.1 MGP_129S1SvImJ_G0037312.1 mouse_genomes_project 11 61296922 61297029 + Gm25929 snRNA snRNA MGP_129S1SvImJ_T0012793.1 MGP_129S1SvImJ_G0010882.1 mouse_genomes_project 11 120635007 120635310 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003174.1 MGP_129S1SvImJ_G0002949.1 mouse_genomes_project 11 50043713 50044964 - Gm12660 antisense antisense MGP_129S1SvImJ_T0027660.1 MGP_129S1SvImJ_G0017953.1 mouse_genomes_project 11 96903 114473 - MGP_129S1SvImJ_P0027660 Drg1 protein_coding protein_coding MGP_129S1SvImJ_T0027661.1 MGP_129S1SvImJ_G0017953.1 mouse_genomes_project 11 97093 99855 - Drg1 protein_coding retained_intron MGP_129S1SvImJ_T0027662.1 MGP_129S1SvImJ_G0017953.1 mouse_genomes_project 11 101406 110613 - Drg1 protein_coding retained_intron MGP_129S1SvImJ_T0027663.1 MGP_129S1SvImJ_G0017953.1 mouse_genomes_project 11 103464 114472 - Drg1 protein_coding processed_transcript MGP_129S1SvImJ_T0027664.1 MGP_129S1SvImJ_G0017953.1 mouse_genomes_project 11 104631 114495 - Drg1 protein_coding retained_intron MGP_129S1SvImJ_T0027665.1 MGP_129S1SvImJ_G0017953.1 mouse_genomes_project 11 107403 114473 - MGP_129S1SvImJ_P0027665 Drg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028148.1 MGP_129S1SvImJ_G0018060.1 mouse_genomes_project 11 15369182 15383937 - MGP_129S1SvImJ_P0028148 Etaa1 protein_coding protein_coding MGP_129S1SvImJ_T0009714.1 MGP_129S1SvImJ_G0007830.1 mouse_genomes_project 11 70755258 70755342 + Mir497 miRNA miRNA MGP_129S1SvImJ_T0028935.1 MGP_129S1SvImJ_G0018267.1 mouse_genomes_project 11 50513042 50831421 + MGP_129S1SvImJ_P0028935 Col23a1 protein_coding protein_coding MGP_129S1SvImJ_T0028936.1 MGP_129S1SvImJ_G0018267.1 mouse_genomes_project 11 50822361 50827802 + MGP_129S1SvImJ_P0028936 Col23a1 protein_coding protein_coding MGP_129S1SvImJ_T0033719.1 MGP_129S1SvImJ_G0019433.1 mouse_genomes_project 11 120733455 120763531 - MGP_129S1SvImJ_P0033719 Rhbdf2 protein_coding protein_coding MGP_129S1SvImJ_T0033720.1 MGP_129S1SvImJ_G0019433.1 mouse_genomes_project 11 120733459 120767642 - MGP_129S1SvImJ_P0033720 Rhbdf2 protein_coding protein_coding MGP_129S1SvImJ_T0033721.1 MGP_129S1SvImJ_G0019433.1 mouse_genomes_project 11 120736376 120737885 - Rhbdf2 protein_coding processed_transcript MGP_129S1SvImJ_T0033722.1 MGP_129S1SvImJ_G0019433.1 mouse_genomes_project 11 120738542 120763578 - Rhbdf2 protein_coding retained_intron MGP_129S1SvImJ_T0031138.1 MGP_129S1SvImJ_G0018806.1 mouse_genomes_project 11 81281185 81287765 - MGP_129S1SvImJ_P0031138 Tefm protein_coding protein_coding MGP_129S1SvImJ_T0031139.1 MGP_129S1SvImJ_G0018806.1 mouse_genomes_project 11 81281185 81285499 - MGP_129S1SvImJ_P0031139 Tefm protein_coding protein_coding MGP_129S1SvImJ_T0031140.1 MGP_129S1SvImJ_G0018806.1 mouse_genomes_project 11 81282453 81287733 - MGP_129S1SvImJ_P0031140 Tefm protein_coding protein_coding MGP_129S1SvImJ_T0028668.1 MGP_129S1SvImJ_G0018185.1 mouse_genomes_project 11 44812681 44829346 - MGP_129S1SvImJ_P0028668 Lsm11 protein_coding protein_coding MGP_129S1SvImJ_T0028669.1 MGP_129S1SvImJ_G0018185.1 mouse_genomes_project 11 44815492 44829346 - MGP_129S1SvImJ_P0028669 Lsm11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031493.1 MGP_129S1SvImJ_G0018903.1 mouse_genomes_project 11 88971229 89009021 - MGP_129S1SvImJ_P0031493 Rad51c protein_coding protein_coding MGP_129S1SvImJ_T0031494.1 MGP_129S1SvImJ_G0018903.1 mouse_genomes_project 11 88973167 89009004 - MGP_129S1SvImJ_P0031494 Rad51c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031495.1 MGP_129S1SvImJ_G0018903.1 mouse_genomes_project 11 88973673 89009452 - MGP_129S1SvImJ_P0031495 Rad51c protein_coding protein_coding MGP_129S1SvImJ_T0031496.1 MGP_129S1SvImJ_G0018903.1 mouse_genomes_project 11 88973960 89008924 - MGP_129S1SvImJ_P0031496 Rad51c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032015.1 MGP_129S1SvImJ_G0019031.1 mouse_genomes_project 11 99840797 99936045 + MGP_129S1SvImJ_P0032015 Arhgap23 protein_coding protein_coding MGP_129S1SvImJ_T0032016.1 MGP_129S1SvImJ_G0019031.1 mouse_genomes_project 11 99840869 99925322 + MGP_129S1SvImJ_P0032016 Arhgap23 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0032017.1 MGP_129S1SvImJ_G0019031.1 mouse_genomes_project 11 99866520 99874464 + Arhgap23 protein_coding processed_transcript MGP_129S1SvImJ_T0032018.1 MGP_129S1SvImJ_G0019031.1 mouse_genomes_project 11 99880395 99936043 + MGP_129S1SvImJ_P0032018 Arhgap23 protein_coding protein_coding MGP_129S1SvImJ_T0032019.1 MGP_129S1SvImJ_G0019031.1 mouse_genomes_project 11 99882365 99936045 + MGP_129S1SvImJ_P0032019 Arhgap23 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032021.1 MGP_129S1SvImJ_G0019031.1 mouse_genomes_project 11 99924802 99936041 + MGP_129S1SvImJ_P0032021 Arhgap23 protein_coding protein_coding MGP_129S1SvImJ_T0017252.1 MGP_129S1SvImJ_G0015190.1 mouse_genomes_project 11 84611333 84614248 + AA465934 processed_transcript antisense MGP_129S1SvImJ_T0017253.1 MGP_129S1SvImJ_G0015190.1 mouse_genomes_project 11 84611354 84614249 + AA465934 processed_transcript antisense MGP_129S1SvImJ_T0017254.1 MGP_129S1SvImJ_G0015190.1 mouse_genomes_project 11 84611362 84611914 + AA465934 processed_transcript retained_intron MGP_129S1SvImJ_T0017255.1 MGP_129S1SvImJ_G0015190.1 mouse_genomes_project 11 84611376 84614246 + AA465934 processed_transcript antisense MGP_129S1SvImJ_T0017256.1 MGP_129S1SvImJ_G0015190.1 mouse_genomes_project 11 84611377 84614247 + AA465934 processed_transcript retained_intron MGP_129S1SvImJ_T0100511.1 MGP_129S1SvImJ_G0038578.1 mouse_genomes_project 11 70127865 70128009 - Gm25835 snoRNA snoRNA MGP_129S1SvImJ_T0102166.1 MGP_129S1SvImJ_G0040001.1 mouse_genomes_project 11 126462308 126473667 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0030185.1 MGP_129S1SvImJ_G0018578.1 mouse_genomes_project 11 70509765 70514991 - MGP_129S1SvImJ_P0030185 Acadvl protein_coding protein_coding MGP_129S1SvImJ_T0030186.1 MGP_129S1SvImJ_G0018578.1 mouse_genomes_project 11 70509771 70510494 - Acadvl protein_coding retained_intron MGP_129S1SvImJ_T0030187.1 MGP_129S1SvImJ_G0018578.1 mouse_genomes_project 11 70509826 70514970 - MGP_129S1SvImJ_P0030187 Acadvl protein_coding protein_coding MGP_129S1SvImJ_T0030188.1 MGP_129S1SvImJ_G0018578.1 mouse_genomes_project 11 70510804 70512157 - Acadvl protein_coding retained_intron MGP_129S1SvImJ_T0030189.1 MGP_129S1SvImJ_G0018578.1 mouse_genomes_project 11 70512771 70514960 - Acadvl protein_coding retained_intron MGP_129S1SvImJ_T0030190.1 MGP_129S1SvImJ_G0018578.1 mouse_genomes_project 11 70513625 70514994 - Acadvl protein_coding retained_intron MGP_129S1SvImJ_T0030191.1 MGP_129S1SvImJ_G0018578.1 mouse_genomes_project 11 70513700 70514982 - Acadvl protein_coding retained_intron MGP_129S1SvImJ_T0102127.1 MGP_129S1SvImJ_G0039962.1 mouse_genomes_project 11 45460237 45460537 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0031739.1 MGP_129S1SvImJ_G0018958.1 mouse_genomes_project 11 96585291 96595647 - MGP_129S1SvImJ_P0031739 Epn3 protein_coding protein_coding MGP_129S1SvImJ_T0031740.1 MGP_129S1SvImJ_G0018958.1 mouse_genomes_project 11 96586787 96595582 - Epn3 protein_coding processed_transcript MGP_129S1SvImJ_T0031741.1 MGP_129S1SvImJ_G0018958.1 mouse_genomes_project 11 96586825 96592218 - MGP_129S1SvImJ_P0031741 Epn3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0031742.1 MGP_129S1SvImJ_G0018958.1 mouse_genomes_project 11 96591677 96593926 - Epn3 protein_coding processed_transcript MGP_129S1SvImJ_T0031743.1 MGP_129S1SvImJ_G0018958.1 mouse_genomes_project 11 96592041 96594793 - Epn3 protein_coding processed_transcript MGP_129S1SvImJ_T0029711.1 MGP_129S1SvImJ_G0018470.1 mouse_genomes_project 11 64101943 64224555 - MGP_129S1SvImJ_P0029711 Cox10 protein_coding protein_coding MGP_129S1SvImJ_T0029712.1 MGP_129S1SvImJ_G0018470.1 mouse_genomes_project 11 64216311 64224557 - Cox10 protein_coding processed_transcript MGP_129S1SvImJ_T0012778.1 MGP_129S1SvImJ_G0010867.1 mouse_genomes_project 11 112508900 112510031 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0033089.1 MGP_129S1SvImJ_G0019309.1 mouse_genomes_project 11 109801805 109925268 - MGP_129S1SvImJ_P0033089 Tex2 protein_coding protein_coding MGP_129S1SvImJ_T0033090.1 MGP_129S1SvImJ_G0019309.1 mouse_genomes_project 11 109848306 109889641 - MGP_129S1SvImJ_P0033090 Tex2 protein_coding protein_coding MGP_129S1SvImJ_T0033091.1 MGP_129S1SvImJ_G0019309.1 mouse_genomes_project 11 109876331 109925761 - MGP_129S1SvImJ_P0033091 Tex2 protein_coding protein_coding MGP_129S1SvImJ_T0033092.1 MGP_129S1SvImJ_G0019309.1 mouse_genomes_project 11 109876716 109891128 - MGP_129S1SvImJ_P0033092 Tex2 protein_coding protein_coding MGP_129S1SvImJ_T0012791.1 MGP_129S1SvImJ_G0010880.1 mouse_genomes_project 11 119792449 119792663 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0027962.1 MGP_129S1SvImJ_G0018015.1 mouse_genomes_project 11 3201076 3293740 - MGP_129S1SvImJ_P0027962 Nudcd3 protein_coding protein_coding MGP_129S1SvImJ_T0027963.1 MGP_129S1SvImJ_G0018015.1 mouse_genomes_project 11 3201371 3214789 - Nudcd3 protein_coding processed_transcript MGP_129S1SvImJ_T0027964.1 MGP_129S1SvImJ_G0018015.1 mouse_genomes_project 11 3201843 3285465 - MGP_129S1SvImJ_P0027964 Nudcd3 protein_coding protein_coding MGP_129S1SvImJ_T0027965.1 MGP_129S1SvImJ_G0018015.1 mouse_genomes_project 11 3218304 3285465 - Nudcd3 protein_coding retained_intron MGP_129S1SvImJ_T0030744.1 MGP_129S1SvImJ_G0018719.1 mouse_genomes_project 11 76393865 76414487 + MGP_129S1SvImJ_P0030744 Inpp5k protein_coding protein_coding MGP_129S1SvImJ_T0030745.1 MGP_129S1SvImJ_G0018719.1 mouse_genomes_project 11 76393906 76414479 + Inpp5k protein_coding retained_intron MGP_129S1SvImJ_T0030746.1 MGP_129S1SvImJ_G0018719.1 mouse_genomes_project 11 76393914 76398148 + Inpp5k protein_coding retained_intron MGP_129S1SvImJ_T0030747.1 MGP_129S1SvImJ_G0018719.1 mouse_genomes_project 11 76393932 76414481 + MGP_129S1SvImJ_P0030747 Inpp5k protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030748.1 MGP_129S1SvImJ_G0018719.1 mouse_genomes_project 11 76401790 76412891 + Inpp5k protein_coding retained_intron MGP_129S1SvImJ_T0030749.1 MGP_129S1SvImJ_G0018719.1 mouse_genomes_project 11 76412400 76413346 + Inpp5k protein_coding processed_transcript MGP_129S1SvImJ_T0030750.1 MGP_129S1SvImJ_G0018719.1 mouse_genomes_project 11 76412460 76413479 + MGP_129S1SvImJ_P0030750 Inpp5k protein_coding protein_coding MGP_129S1SvImJ_T0032634.1 MGP_129S1SvImJ_G0019215.1 mouse_genomes_project 11 104912548 104928395 - MGP_129S1SvImJ_P0032634 Dusp3 protein_coding protein_coding MGP_129S1SvImJ_T0032635.1 MGP_129S1SvImJ_G0019215.1 mouse_genomes_project 11 104912548 104924886 - MGP_129S1SvImJ_P0032635 Dusp3 protein_coding protein_coding MGP_129S1SvImJ_T0032636.1 MGP_129S1SvImJ_G0019215.1 mouse_genomes_project 11 104912548 104928395 - MGP_129S1SvImJ_P0032636 Dusp3 protein_coding protein_coding MGP_129S1SvImJ_T0032637.1 MGP_129S1SvImJ_G0019215.1 mouse_genomes_project 11 104912548 104926183 - MGP_129S1SvImJ_P0032637 Dusp3 protein_coding protein_coding MGP_129S1SvImJ_T0032638.1 MGP_129S1SvImJ_G0019215.1 mouse_genomes_project 11 104914864 104923078 - MGP_129S1SvImJ_P0032638 Dusp3 protein_coding protein_coding MGP_129S1SvImJ_T0032639.1 MGP_129S1SvImJ_G0019215.1 mouse_genomes_project 11 104916111 104926162 - MGP_129S1SvImJ_P0032639 Dusp3 protein_coding protein_coding MGP_129S1SvImJ_T0032640.1 MGP_129S1SvImJ_G0019215.1 mouse_genomes_project 11 104921983 104926135 - MGP_129S1SvImJ_P0032640 Dusp3 protein_coding protein_coding MGP_129S1SvImJ_T0006287.1 MGP_129S1SvImJ_G0005253.1 mouse_genomes_project 11 72231548 72243006 - Gm12324 lincRNA lincRNA MGP_129S1SvImJ_T0029313.1 MGP_129S1SvImJ_G0018386.1 mouse_genomes_project 11 58760013 58773140 + MGP_129S1SvImJ_P0029313 Trim11 protein_coding protein_coding MGP_129S1SvImJ_T0029314.1 MGP_129S1SvImJ_G0018386.1 mouse_genomes_project 11 58760035 58773143 + MGP_129S1SvImJ_P0029314 Trim11 protein_coding protein_coding MGP_129S1SvImJ_T0029315.1 MGP_129S1SvImJ_G0018386.1 mouse_genomes_project 11 58760036 58773142 + MGP_129S1SvImJ_P0029315 Trim11 protein_coding protein_coding MGP_129S1SvImJ_T0033560.1 MGP_129S1SvImJ_G0019404.1 mouse_genomes_project 11 119968922 119971464 - Recql5 protein_coding retained_intron MGP_129S1SvImJ_T0033561.1 MGP_129S1SvImJ_G0019404.1 mouse_genomes_project 11 119968922 120011210 - MGP_129S1SvImJ_P0033561 Recql5 protein_coding protein_coding MGP_129S1SvImJ_T0033562.1 MGP_129S1SvImJ_G0019404.1 mouse_genomes_project 11 119968922 120011210 - MGP_129S1SvImJ_P0033562 Recql5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033563.1 MGP_129S1SvImJ_G0019404.1 mouse_genomes_project 11 119971742 120005116 - MGP_129S1SvImJ_P0033563 Recql5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033564.1 MGP_129S1SvImJ_G0019404.1 mouse_genomes_project 11 119972592 120011210 - Recql5 protein_coding retained_intron MGP_129S1SvImJ_T0033565.1 MGP_129S1SvImJ_G0019404.1 mouse_genomes_project 11 119973136 119983567 - Recql5 protein_coding processed_transcript MGP_129S1SvImJ_T0033570.1 MGP_129S1SvImJ_G0019404.1 mouse_genomes_project 11 119991078 120011210 - MGP_129S1SvImJ_P0033570 Recql5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0033571.1 MGP_129S1SvImJ_G0019404.1 mouse_genomes_project 11 120003155 120005284 - Recql5 protein_coding retained_intron MGP_129S1SvImJ_T0098453.1 MGP_129S1SvImJ_G0036538.1 mouse_genomes_project 11 75001308 75001427 + n-R5s71 rRNA rRNA MGP_129S1SvImJ_T0006237.1 MGP_129S1SvImJ_G0005210.1 mouse_genomes_project 11 38653858 38993207 + lincRNA lincRNA MGP_129S1SvImJ_T0028424.1 MGP_129S1SvImJ_G0018120.1 mouse_genomes_project 11 29095549 29108715 - MGP_129S1SvImJ_P0028424 Chac2 protein_coding protein_coding MGP_129S1SvImJ_T0028425.1 MGP_129S1SvImJ_G0018120.1 mouse_genomes_project 11 29097288 29108699 - MGP_129S1SvImJ_P0028425 Chac2 protein_coding protein_coding MGP_129S1SvImJ_T0003159.1 MGP_129S1SvImJ_G0002934.1 mouse_genomes_project 11 32025291 32031707 + Gm12120 antisense antisense MGP_129S1SvImJ_T0028761.1 MGP_129S1SvImJ_G0018221.1 mouse_genomes_project 11 48225813 48247372 - MGP_129S1SvImJ_P0028761 Btnl9 protein_coding protein_coding MGP_129S1SvImJ_T0028762.1 MGP_129S1SvImJ_G0018221.1 mouse_genomes_project 11 48229280 48247258 - MGP_129S1SvImJ_P0028762 Btnl9 protein_coding protein_coding MGP_129S1SvImJ_T0028763.1 MGP_129S1SvImJ_G0018221.1 mouse_genomes_project 11 48229548 48230902 - Btnl9 protein_coding retained_intron MGP_129S1SvImJ_T0028764.1 MGP_129S1SvImJ_G0018221.1 mouse_genomes_project 11 48235052 48247250 - MGP_129S1SvImJ_P0028764 Btnl9 protein_coding protein_coding MGP_129S1SvImJ_T0028765.1 MGP_129S1SvImJ_G0018221.1 mouse_genomes_project 11 48242515 48247280 - Btnl9 protein_coding processed_transcript MGP_129S1SvImJ_T0032876.1 MGP_129S1SvImJ_G0019256.1 mouse_genomes_project 11 106152521 106155652 + MGP_129S1SvImJ_P0032876 Hexim1 protein_coding protein_coding MGP_129S1SvImJ_T0101845.1 MGP_129S1SvImJ_G0039792.1 mouse_genomes_project 11 74097114 74098052 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101846.1 MGP_129S1SvImJ_G0039792.1 mouse_genomes_project 11 74097316 74105361 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101847.1 MGP_129S1SvImJ_G0039792.1 mouse_genomes_project 11 74097578 74105393 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0009672.1 MGP_129S1SvImJ_G0007788.1 mouse_genomes_project 11 26730672 26730758 + Mir216b miRNA miRNA MGP_129S1SvImJ_T0099275.1 MGP_129S1SvImJ_G0037342.1 mouse_genomes_project 11 90855144 90855248 - Gm22534 snRNA snRNA MGP_129S1SvImJ_T0012582.1 MGP_129S1SvImJ_G0010671.1 mouse_genomes_project 11 39087896 39088432 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012557.1 MGP_129S1SvImJ_G0010646.1 mouse_genomes_project 11 27347459 27347717 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012540.1 MGP_129S1SvImJ_G0010629.1 mouse_genomes_project 11 20457019 20458446 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032461.1 MGP_129S1SvImJ_G0019177.1 mouse_genomes_project 11 103888432 103890549 + MGP_129S1SvImJ_P0032461 Hsd17b1 protein_coding protein_coding MGP_129S1SvImJ_T0030605.1 MGP_129S1SvImJ_G0018682.1 mouse_genomes_project 11 74734105 74746331 - MGP_129S1SvImJ_P0030605 Olfr139 protein_coding protein_coding MGP_129S1SvImJ_T0030606.1 MGP_129S1SvImJ_G0018682.1 mouse_genomes_project 11 74734105 74735053 - MGP_129S1SvImJ_P0030606 Olfr139 protein_coding protein_coding MGP_129S1SvImJ_T0030607.1 MGP_129S1SvImJ_G0018682.1 mouse_genomes_project 11 74740216 74743813 - Olfr139 protein_coding processed_transcript MGP_129S1SvImJ_T0017183.1 MGP_129S1SvImJ_G0015151.1 mouse_genomes_project 11 3666150 3670281 - Snhg15 processed_transcript processed_transcript MGP_129S1SvImJ_T0017184.1 MGP_129S1SvImJ_G0015151.1 mouse_genomes_project 11 3666151 3667290 - Snhg15 processed_transcript processed_transcript MGP_129S1SvImJ_T0017185.1 MGP_129S1SvImJ_G0015151.1 mouse_genomes_project 11 3666184 3669962 - Snhg15 processed_transcript processed_transcript MGP_129S1SvImJ_T0017186.1 MGP_129S1SvImJ_G0015151.1 mouse_genomes_project 11 3669419 3670267 - Snhg15 processed_transcript processed_transcript MGP_129S1SvImJ_T0030764.1 MGP_129S1SvImJ_G0018722.1 mouse_genomes_project 11 76505107 76542726 + MGP_129S1SvImJ_P0030764 Ywhae protein_coding protein_coding MGP_129S1SvImJ_T0030765.1 MGP_129S1SvImJ_G0018722.1 mouse_genomes_project 11 76505151 76541506 + MGP_129S1SvImJ_P0030765 Ywhae protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030766.1 MGP_129S1SvImJ_G0018722.1 mouse_genomes_project 11 76505199 76532063 + Ywhae protein_coding retained_intron MGP_129S1SvImJ_T0030767.1 MGP_129S1SvImJ_G0018722.1 mouse_genomes_project 11 76505386 76531819 + MGP_129S1SvImJ_P0030767 Ywhae protein_coding protein_coding MGP_129S1SvImJ_T0030768.1 MGP_129S1SvImJ_G0018722.1 mouse_genomes_project 11 76526543 76536197 + Ywhae protein_coding retained_intron MGP_129S1SvImJ_T0029833.1 MGP_129S1SvImJ_G0018503.1 mouse_genomes_project 11 68938034 68947852 + MGP_129S1SvImJ_P0029833 Ccdc42 protein_coding protein_coding MGP_129S1SvImJ_T0029834.1 MGP_129S1SvImJ_G0018503.1 mouse_genomes_project 11 68944862 68948070 + MGP_129S1SvImJ_P0029834 Ccdc42 protein_coding protein_coding MGP_129S1SvImJ_T0006229.1 MGP_129S1SvImJ_G0005202.1 mouse_genomes_project 11 31043071 31044035 - 4930555O08Rik lincRNA lincRNA MGP_129S1SvImJ_T0003194.1 MGP_129S1SvImJ_G0002966.1 mouse_genomes_project 11 57250178 57275848 - 4933424L21Rik antisense antisense MGP_129S1SvImJ_T0029913.1 MGP_129S1SvImJ_G0018517.1 mouse_genomes_project 11 69493873 69497753 + MGP_129S1SvImJ_P0029913 Vamp2 protein_coding protein_coding MGP_129S1SvImJ_T0029914.1 MGP_129S1SvImJ_G0018517.1 mouse_genomes_project 11 69493893 69496060 + MGP_129S1SvImJ_P0029914 Vamp2 protein_coding protein_coding MGP_129S1SvImJ_T0029915.1 MGP_129S1SvImJ_G0018517.1 mouse_genomes_project 11 69493905 69495068 + Vamp2 protein_coding retained_intron MGP_129S1SvImJ_T0029916.1 MGP_129S1SvImJ_G0018517.1 mouse_genomes_project 11 69493926 69495443 + Vamp2 protein_coding processed_transcript MGP_129S1SvImJ_T0029917.1 MGP_129S1SvImJ_G0018517.1 mouse_genomes_project 11 69494998 69495569 + Vamp2 protein_coding retained_intron MGP_129S1SvImJ_T0009771.1 MGP_129S1SvImJ_G0007887.1 mouse_genomes_project 11 110120003 110120104 - Gm25994 miRNA miRNA MGP_129S1SvImJ_T0027852.1 MGP_129S1SvImJ_G0017993.1 mouse_genomes_project 11 2001392 2062164 + MGP_129S1SvImJ_P0027852 Ap1b1 protein_coding protein_coding MGP_129S1SvImJ_T0027853.1 MGP_129S1SvImJ_G0017993.1 mouse_genomes_project 11 2001392 2062102 + MGP_129S1SvImJ_P0027853 Ap1b1 protein_coding protein_coding MGP_129S1SvImJ_T0027854.1 MGP_129S1SvImJ_G0017993.1 mouse_genomes_project 11 2001480 2033195 + Ap1b1 protein_coding processed_transcript MGP_129S1SvImJ_T0027855.1 MGP_129S1SvImJ_G0017993.1 mouse_genomes_project 11 2001502 2034308 + Ap1b1 protein_coding processed_transcript MGP_129S1SvImJ_T0027856.1 MGP_129S1SvImJ_G0017993.1 mouse_genomes_project 11 2027478 2033195 + Ap1b1 protein_coding processed_transcript MGP_129S1SvImJ_T0027857.1 MGP_129S1SvImJ_G0017993.1 mouse_genomes_project 11 2027534 2062102 + MGP_129S1SvImJ_P0027857 Ap1b1 protein_coding protein_coding MGP_129S1SvImJ_T0027858.1 MGP_129S1SvImJ_G0017993.1 mouse_genomes_project 11 2050370 2052185 + Ap1b1 protein_coding processed_transcript MGP_129S1SvImJ_T0027859.1 MGP_129S1SvImJ_G0017993.1 mouse_genomes_project 11 2056733 2059775 + Ap1b1 protein_coding processed_transcript MGP_129S1SvImJ_T0027860.1 MGP_129S1SvImJ_G0017993.1 mouse_genomes_project 11 2058128 2059794 + Ap1b1 protein_coding processed_transcript MGP_129S1SvImJ_T0031091.1 MGP_129S1SvImJ_G0018794.1 mouse_genomes_project 11 80317384 80333627 - MGP_129S1SvImJ_P0031091 Wsb1 protein_coding protein_coding MGP_129S1SvImJ_T0031092.1 MGP_129S1SvImJ_G0018794.1 mouse_genomes_project 11 80317400 80321037 - Wsb1 protein_coding retained_intron MGP_129S1SvImJ_T0031093.1 MGP_129S1SvImJ_G0018794.1 mouse_genomes_project 11 80318288 80326672 - MGP_129S1SvImJ_P0031093 Wsb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031094.1 MGP_129S1SvImJ_G0018794.1 mouse_genomes_project 11 80318319 80320962 - Wsb1 protein_coding processed_transcript MGP_129S1SvImJ_T0031095.1 MGP_129S1SvImJ_G0018794.1 mouse_genomes_project 11 80321300 80333625 - MGP_129S1SvImJ_P0031095 Wsb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031096.1 MGP_129S1SvImJ_G0018794.1 mouse_genomes_project 11 80321412 80333426 - MGP_129S1SvImJ_P0031096 Wsb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031097.1 MGP_129S1SvImJ_G0018794.1 mouse_genomes_project 11 80322120 80329980 - Wsb1 protein_coding retained_intron MGP_129S1SvImJ_T0017170.1 MGP_129S1SvImJ_G0015147.1 mouse_genomes_project 11 316054 320763 + 8430429K09Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017171.1 MGP_129S1SvImJ_G0015147.1 mouse_genomes_project 11 316126 320627 + 8430429K09Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017172.1 MGP_129S1SvImJ_G0015147.1 mouse_genomes_project 11 316161 322002 + 8430429K09Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017173.1 MGP_129S1SvImJ_G0015147.1 mouse_genomes_project 11 316161 352336 + 8430429K09Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017174.1 MGP_129S1SvImJ_G0015147.1 mouse_genomes_project 11 316169 320680 + 8430429K09Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0032414.1 MGP_129S1SvImJ_G0019167.1 mouse_genomes_project 11 103480506 103510817 - MGP_129S1SvImJ_P0032414 Rab5c protein_coding protein_coding MGP_129S1SvImJ_T0032415.1 MGP_129S1SvImJ_G0019167.1 mouse_genomes_project 11 103480508 103510817 - MGP_129S1SvImJ_P0032415 Rab5c protein_coding protein_coding MGP_129S1SvImJ_T0032416.1 MGP_129S1SvImJ_G0019167.1 mouse_genomes_project 11 103483997 103498112 - MGP_129S1SvImJ_P0032416 Rab5c protein_coding protein_coding MGP_129S1SvImJ_T0032417.1 MGP_129S1SvImJ_G0019167.1 mouse_genomes_project 11 103487846 103510778 - MGP_129S1SvImJ_P0032417 Rab5c protein_coding protein_coding MGP_129S1SvImJ_T0006390.1 MGP_129S1SvImJ_G0005325.1 mouse_genomes_project 11 121779452 121787985 + Gm11734 lincRNA lincRNA MGP_129S1SvImJ_T0029951.1 MGP_129S1SvImJ_G0018526.1 mouse_genomes_project 11 69745746 69747560 + MGP_129S1SvImJ_P0029951 Trappc1 protein_coding protein_coding MGP_129S1SvImJ_T0029952.1 MGP_129S1SvImJ_G0018526.1 mouse_genomes_project 11 69745829 69747560 + MGP_129S1SvImJ_P0029952 Trappc1 protein_coding protein_coding MGP_129S1SvImJ_T0029953.1 MGP_129S1SvImJ_G0018526.1 mouse_genomes_project 11 69745841 69747560 + MGP_129S1SvImJ_P0029953 Trappc1 protein_coding protein_coding MGP_129S1SvImJ_T0029954.1 MGP_129S1SvImJ_G0018526.1 mouse_genomes_project 11 69745923 69747560 + MGP_129S1SvImJ_P0029954 Trappc1 protein_coding protein_coding MGP_129S1SvImJ_T0029955.1 MGP_129S1SvImJ_G0018526.1 mouse_genomes_project 11 69746204 69746999 + Trappc1 protein_coding processed_transcript MGP_129S1SvImJ_T0003249.1 MGP_129S1SvImJ_G0003011.1 mouse_genomes_project 11 78991999 78994653 - Dhrs13os antisense antisense MGP_129S1SvImJ_T0003254.1 MGP_129S1SvImJ_G0003016.1 mouse_genomes_project 11 80721831 80737900 - Rab11fip4os1 antisense antisense MGP_129S1SvImJ_T0031709.1 MGP_129S1SvImJ_G0018954.1 mouse_genomes_project 11 96401480 96414141 + MGP_129S1SvImJ_P0031709 Ankrd40 protein_coding protein_coding MGP_129S1SvImJ_T0031710.1 MGP_129S1SvImJ_G0018954.1 mouse_genomes_project 11 96401480 96416478 + MGP_129S1SvImJ_P0031710 Ankrd40 protein_coding protein_coding MGP_129S1SvImJ_T0031711.1 MGP_129S1SvImJ_G0018954.1 mouse_genomes_project 11 96412921 96414780 + Ankrd40 protein_coding retained_intron MGP_129S1SvImJ_T0032817.1 MGP_129S1SvImJ_G0019244.1 mouse_genomes_project 11 105821872 105849798 - MGP_129S1SvImJ_P0032817 Gjc1 protein_coding protein_coding MGP_129S1SvImJ_T0032818.1 MGP_129S1SvImJ_G0019244.1 mouse_genomes_project 11 105821872 105828519 - MGP_129S1SvImJ_P0032818 Gjc1 protein_coding protein_coding MGP_129S1SvImJ_T0032819.1 MGP_129S1SvImJ_G0019244.1 mouse_genomes_project 11 105821872 105849277 - MGP_129S1SvImJ_P0032819 Gjc1 protein_coding protein_coding MGP_129S1SvImJ_T0032820.1 MGP_129S1SvImJ_G0019244.1 mouse_genomes_project 11 105823027 105829414 - Gjc1 protein_coding retained_intron MGP_129S1SvImJ_T0032821.1 MGP_129S1SvImJ_G0019244.1 mouse_genomes_project 11 105823472 105849308 - Gjc1 protein_coding processed_transcript MGP_129S1SvImJ_T0028972.1 MGP_129S1SvImJ_G0018278.1 mouse_genomes_project 11 51250732 51260418 + MGP_129S1SvImJ_P0028972 Cdkn2aipnl protein_coding protein_coding MGP_129S1SvImJ_T0028973.1 MGP_129S1SvImJ_G0018278.1 mouse_genomes_project 11 51250963 51259328 + MGP_129S1SvImJ_P0028973 Cdkn2aipnl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0032286.1 MGP_129S1SvImJ_G0019116.1 mouse_genomes_project 11 102484384 102488298 + MGP_129S1SvImJ_P0032286 Krtap4-9 protein_coding protein_coding MGP_129S1SvImJ_T0099262.1 MGP_129S1SvImJ_G0037329.1 mouse_genomes_project 11 80754673 80754781 - Gm24887 snRNA snRNA MGP_129S1SvImJ_T0003166.1 MGP_129S1SvImJ_G0002941.1 mouse_genomes_project 11 42354606 42357653 - antisense antisense MGP_129S1SvImJ_T0006363.1 MGP_129S1SvImJ_G0005306.1 mouse_genomes_project 11 113426512 113429114 + 1700023C21Rik lincRNA lincRNA MGP_129S1SvImJ_T0028340.1 MGP_129S1SvImJ_G0018104.1 mouse_genomes_project 11 27165611 27218156 + MGP_129S1SvImJ_P0028340 Smek2 protein_coding protein_coding MGP_129S1SvImJ_T0028341.1 MGP_129S1SvImJ_G0018104.1 mouse_genomes_project 11 27165611 27207000 + MGP_129S1SvImJ_P0028341 Smek2 protein_coding protein_coding MGP_129S1SvImJ_T0028342.1 MGP_129S1SvImJ_G0018104.1 mouse_genomes_project 11 27166474 27182092 + MGP_129S1SvImJ_P0028342 Smek2 protein_coding protein_coding MGP_129S1SvImJ_T0028343.1 MGP_129S1SvImJ_G0018104.1 mouse_genomes_project 11 27190920 27194908 + Smek2 protein_coding processed_transcript MGP_129S1SvImJ_T0028344.1 MGP_129S1SvImJ_G0018104.1 mouse_genomes_project 11 27190931 27206845 + MGP_129S1SvImJ_P0028344 Smek2 protein_coding protein_coding MGP_129S1SvImJ_T0028345.1 MGP_129S1SvImJ_G0018104.1 mouse_genomes_project 11 27199323 27215915 + Smek2 protein_coding processed_transcript MGP_129S1SvImJ_T0028346.1 MGP_129S1SvImJ_G0018104.1 mouse_genomes_project 11 27210982 27218156 + MGP_129S1SvImJ_P0028346 Smek2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0017294.1 MGP_129S1SvImJ_G0015215.1 mouse_genomes_project 11 110822905 110832020 + Gm11714 processed_transcript processed_transcript MGP_129S1SvImJ_T0012645.1 MGP_129S1SvImJ_G0010734.1 mouse_genomes_project 11 60217795 60218757 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034308.1 MGP_129S1SvImJ_G0019554.1 mouse_genomes_project 11 126387446 126393988 + Ptchd3 protein_coding retained_intron MGP_129S1SvImJ_T0034309.1 MGP_129S1SvImJ_G0019554.1 mouse_genomes_project 11 126387446 126400624 + MGP_129S1SvImJ_P0034309 Ptchd3 protein_coding protein_coding MGP_129S1SvImJ_T0006316.1 MGP_129S1SvImJ_G0005272.1 mouse_genomes_project 11 86156410 86159847 - 1700109G15Rik lincRNA lincRNA MGP_129S1SvImJ_T0006377.1 MGP_129S1SvImJ_G0005316.1 mouse_genomes_project 11 118116247 118117530 + Gm11691 lincRNA lincRNA MGP_129S1SvImJ_T0003235.1 MGP_129S1SvImJ_G0002999.1 mouse_genomes_project 11 68934067 68937777 - Ccdc42os antisense antisense MGP_129S1SvImJ_T0031744.1 MGP_129S1SvImJ_G0018959.1 mouse_genomes_project 11 96597019 96620485 - Mycbpap protein_coding retained_intron MGP_129S1SvImJ_T0031745.1 MGP_129S1SvImJ_G0018959.1 mouse_genomes_project 11 96597019 96599218 - Mycbpap protein_coding processed_transcript MGP_129S1SvImJ_T0031746.1 MGP_129S1SvImJ_G0018959.1 mouse_genomes_project 11 96597019 96604514 - MGP_129S1SvImJ_P0031746 Mycbpap protein_coding protein_coding MGP_129S1SvImJ_T0031747.1 MGP_129S1SvImJ_G0018959.1 mouse_genomes_project 11 96597019 96620485 - MGP_129S1SvImJ_P0031747 Mycbpap protein_coding protein_coding MGP_129S1SvImJ_T0031748.1 MGP_129S1SvImJ_G0018959.1 mouse_genomes_project 11 96598652 96599205 - Mycbpap protein_coding retained_intron MGP_129S1SvImJ_T0031749.1 MGP_129S1SvImJ_G0018959.1 mouse_genomes_project 11 96604858 96607332 - Mycbpap protein_coding retained_intron MGP_129S1SvImJ_T0029383.1 MGP_129S1SvImJ_G0018406.1 mouse_genomes_project 11 59641707 59660273 - MGP_129S1SvImJ_P0029383 Flcn protein_coding protein_coding MGP_129S1SvImJ_T0029384.1 MGP_129S1SvImJ_G0018406.1 mouse_genomes_project 11 59641756 59660181 - Flcn protein_coding retained_intron MGP_129S1SvImJ_T0029385.1 MGP_129S1SvImJ_G0018406.1 mouse_genomes_project 11 59642089 59659845 - MGP_129S1SvImJ_P0029385 Flcn protein_coding protein_coding MGP_129S1SvImJ_T0029386.1 MGP_129S1SvImJ_G0018406.1 mouse_genomes_project 11 59654015 59659858 - Flcn protein_coding processed_transcript MGP_129S1SvImJ_T0029387.1 MGP_129S1SvImJ_G0018406.1 mouse_genomes_project 11 59654778 59660251 - MGP_129S1SvImJ_P0029387 Flcn protein_coding protein_coding MGP_129S1SvImJ_T0029388.1 MGP_129S1SvImJ_G0018406.1 mouse_genomes_project 11 59659284 59659968 - Flcn protein_coding retained_intron MGP_129S1SvImJ_T0027666.1 MGP_129S1SvImJ_G0017954.1 mouse_genomes_project 11 138405 139596 + Patz1 protein_coding processed_transcript MGP_129S1SvImJ_T0027667.1 MGP_129S1SvImJ_G0017954.1 mouse_genomes_project 11 138698 158487 + Patz1 protein_coding processed_transcript MGP_129S1SvImJ_T0027668.1 MGP_129S1SvImJ_G0017954.1 mouse_genomes_project 11 138733 144493 + Patz1 protein_coding processed_transcript MGP_129S1SvImJ_T0027669.1 MGP_129S1SvImJ_G0017954.1 mouse_genomes_project 11 138785 157470 + MGP_129S1SvImJ_P0027669 Patz1 protein_coding protein_coding MGP_129S1SvImJ_T0027670.1 MGP_129S1SvImJ_G0017954.1 mouse_genomes_project 11 138812 158487 + MGP_129S1SvImJ_P0027670 Patz1 protein_coding protein_coding MGP_129S1SvImJ_T0027671.1 MGP_129S1SvImJ_G0017954.1 mouse_genomes_project 11 139396 144833 + MGP_129S1SvImJ_P0027671 Patz1 protein_coding protein_coding MGP_129S1SvImJ_T0027672.1 MGP_129S1SvImJ_G0017954.1 mouse_genomes_project 11 139842 158487 + MGP_129S1SvImJ_P0027672 Patz1 protein_coding protein_coding MGP_129S1SvImJ_T0027673.1 MGP_129S1SvImJ_G0017954.1 mouse_genomes_project 11 140862 157546 + Patz1 protein_coding processed_transcript MGP_129S1SvImJ_T0027674.1 MGP_129S1SvImJ_G0017954.1 mouse_genomes_project 11 141598 144072 + Patz1 protein_coding processed_transcript MGP_129S1SvImJ_T0027675.1 MGP_129S1SvImJ_G0017954.1 mouse_genomes_project 11 142271 144299 + Patz1 protein_coding processed_transcript MGP_129S1SvImJ_T0027676.1 MGP_129S1SvImJ_G0017954.1 mouse_genomes_project 11 147687 157071 + MGP_129S1SvImJ_P0027676 Patz1 protein_coding protein_coding MGP_129S1SvImJ_T0032290.1 MGP_129S1SvImJ_G0019120.1 mouse_genomes_project 11 102509386 102511884 - MGP_129S1SvImJ_P0032290 protein_coding protein_coding MGP_129S1SvImJ_T0029413.1 MGP_129S1SvImJ_G0018412.1 mouse_genomes_project 11 59969874 60067966 + Rai1 protein_coding processed_transcript MGP_129S1SvImJ_T0029414.1 MGP_129S1SvImJ_G0018412.1 mouse_genomes_project 11 59970038 60054199 + MGP_129S1SvImJ_P0029414 Rai1 protein_coding protein_coding MGP_129S1SvImJ_T0029415.1 MGP_129S1SvImJ_G0018412.1 mouse_genomes_project 11 60004920 60060793 + MGP_129S1SvImJ_P0029415 Rai1 protein_coding protein_coding MGP_129S1SvImJ_T0029416.1 MGP_129S1SvImJ_G0018412.1 mouse_genomes_project 11 60005095 60007313 + Rai1 protein_coding processed_transcript MGP_129S1SvImJ_T0029417.1 MGP_129S1SvImJ_G0018412.1 mouse_genomes_project 11 60052251 60066814 + MGP_129S1SvImJ_P0029417 Rai1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0031755.1 MGP_129S1SvImJ_G0018962.1 mouse_genomes_project 11 96674665 96678745 + MGP_129S1SvImJ_P0031755 Chad protein_coding protein_coding MGP_129S1SvImJ_T0003328.1 MGP_129S1SvImJ_G0003073.1 mouse_genomes_project 11 106422556 106427950 + Arhgap27os2 antisense antisense MGP_129S1SvImJ_T0033147.1 MGP_129S1SvImJ_G0019318.1 mouse_genomes_project 11 110543536 110567233 - MGP_129S1SvImJ_P0033147 Nol11 protein_coding protein_coding MGP_129S1SvImJ_T0033148.1 MGP_129S1SvImJ_G0019318.1 mouse_genomes_project 11 110543536 110567233 - MGP_129S1SvImJ_P0033148 Nol11 protein_coding protein_coding MGP_129S1SvImJ_T0033149.1 MGP_129S1SvImJ_G0019318.1 mouse_genomes_project 11 110544233 110545307 - Nol11 protein_coding processed_transcript MGP_129S1SvImJ_T0033150.1 MGP_129S1SvImJ_G0019318.1 mouse_genomes_project 11 110556558 110562673 - Nol11 protein_coding processed_transcript MGP_129S1SvImJ_T0033151.1 MGP_129S1SvImJ_G0019318.1 mouse_genomes_project 11 110564391 110567204 - Nol11 protein_coding processed_transcript MGP_129S1SvImJ_T0034178.1 MGP_129S1SvImJ_G0019522.1 mouse_genomes_project 11 125195856 125196898 - protein_coding processed_transcript MGP_129S1SvImJ_T0034179.1 MGP_129S1SvImJ_G0019522.1 mouse_genomes_project 11 125195856 125198651 - MGP_129S1SvImJ_P0034179 protein_coding protein_coding MGP_129S1SvImJ_T0034180.1 MGP_129S1SvImJ_G0019522.1 mouse_genomes_project 11 125195856 125198645 - MGP_129S1SvImJ_P0034180 protein_coding protein_coding MGP_129S1SvImJ_T0034181.1 MGP_129S1SvImJ_G0019522.1 mouse_genomes_project 11 125195856 125198645 - MGP_129S1SvImJ_P0034181 protein_coding protein_coding MGP_129S1SvImJ_T0034182.1 MGP_129S1SvImJ_G0019522.1 mouse_genomes_project 11 125195857 125198651 - MGP_129S1SvImJ_P0034182 protein_coding protein_coding MGP_129S1SvImJ_T0031308.1 MGP_129S1SvImJ_G0018861.1 mouse_genomes_project 11 85135420 85166925 + MGP_129S1SvImJ_P0031308 Heatr6 protein_coding protein_coding MGP_129S1SvImJ_T0031309.1 MGP_129S1SvImJ_G0018861.1 mouse_genomes_project 11 85135438 85165191 + Heatr6 protein_coding processed_transcript MGP_129S1SvImJ_T0031310.1 MGP_129S1SvImJ_G0018861.1 mouse_genomes_project 11 85135753 85137534 + Heatr6 protein_coding processed_transcript MGP_129S1SvImJ_T0031311.1 MGP_129S1SvImJ_G0018861.1 mouse_genomes_project 11 85142404 85146998 + Heatr6 protein_coding retained_intron MGP_129S1SvImJ_T0031312.1 MGP_129S1SvImJ_G0018861.1 mouse_genomes_project 11 85156157 85162087 + Heatr6 protein_coding processed_transcript MGP_129S1SvImJ_T0030260.1 MGP_129S1SvImJ_G0018593.1 mouse_genomes_project 11 70926177 70943324 - MGP_129S1SvImJ_P0030260 Pelp1 protein_coding protein_coding MGP_129S1SvImJ_T0030261.1 MGP_129S1SvImJ_G0018593.1 mouse_genomes_project 11 70935939 70943327 - MGP_129S1SvImJ_P0030261 Pelp1 protein_coding protein_coding MGP_129S1SvImJ_T0032029.1 MGP_129S1SvImJ_G0019035.1 mouse_genomes_project 11 100117503 100141214 + MGP_129S1SvImJ_P0032029 Mllt6 protein_coding protein_coding MGP_129S1SvImJ_T0032030.1 MGP_129S1SvImJ_G0019035.1 mouse_genomes_project 11 100117531 100138282 + Mllt6 protein_coding processed_transcript MGP_129S1SvImJ_T0032031.1 MGP_129S1SvImJ_G0019035.1 mouse_genomes_project 11 100117531 100141214 + MGP_129S1SvImJ_P0032031 Mllt6 protein_coding protein_coding MGP_129S1SvImJ_T0032032.1 MGP_129S1SvImJ_G0019035.1 mouse_genomes_project 11 100119137 100127687 + Mllt6 protein_coding processed_transcript MGP_129S1SvImJ_T0032033.1 MGP_129S1SvImJ_G0019035.1 mouse_genomes_project 11 100130190 100132509 + Mllt6 protein_coding processed_transcript MGP_129S1SvImJ_T0032034.1 MGP_129S1SvImJ_G0019035.1 mouse_genomes_project 11 100130190 100132509 + Mllt6 protein_coding processed_transcript MGP_129S1SvImJ_T0032974.1 MGP_129S1SvImJ_G0019280.1 mouse_genomes_project 11 108126609 108326663 + MGP_129S1SvImJ_P0032974 Efcab3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0032975.1 MGP_129S1SvImJ_G0019280.1 mouse_genomes_project 11 108270683 108298130 + MGP_129S1SvImJ_P0032975 Efcab3 protein_coding protein_coding MGP_129S1SvImJ_T0032976.1 MGP_129S1SvImJ_G0019280.1 mouse_genomes_project 11 108273935 108317451 + MGP_129S1SvImJ_P0032976 Efcab3 protein_coding protein_coding MGP_129S1SvImJ_T0032977.1 MGP_129S1SvImJ_G0019280.1 mouse_genomes_project 11 108301259 108326806 + MGP_129S1SvImJ_P0032977 Efcab3 protein_coding protein_coding MGP_129S1SvImJ_T0032978.1 MGP_129S1SvImJ_G0019280.1 mouse_genomes_project 11 108323652 108326804 + Efcab3 protein_coding processed_transcript MGP_129S1SvImJ_T0030802.1 MGP_129S1SvImJ_G0018731.1 mouse_genomes_project 11 77039822 77040883 + MGP_129S1SvImJ_P0030802 Dbil5 protein_coding protein_coding MGP_129S1SvImJ_T0101848.1 MGP_129S1SvImJ_G0039793.1 mouse_genomes_project 11 74949963 74960395 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101849.1 MGP_129S1SvImJ_G0039793.1 mouse_genomes_project 11 74950438 74951374 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0028530.1 MGP_129S1SvImJ_G0018150.1 mouse_genomes_project 11 32534526 32538278 - MGP_129S1SvImJ_P0028530 Foxi1 protein_coding protein_coding MGP_129S1SvImJ_T0099292.1 MGP_129S1SvImJ_G0037359.1 mouse_genomes_project 11 110097668 110097775 - Gm25889 snRNA snRNA MGP_129S1SvImJ_T0028798.1 MGP_129S1SvImJ_G0018231.1 mouse_genomes_project 11 48606018 48606898 + MGP_129S1SvImJ_P0028798 Olfr1385 protein_coding protein_coding MGP_129S1SvImJ_T0003323.1 MGP_129S1SvImJ_G0003068.1 mouse_genomes_project 11 104972985 104977818 - E130111B04Rik antisense antisense MGP_129S1SvImJ_T0003333.1 MGP_129S1SvImJ_G0003078.1 mouse_genomes_project 11 109231940 109253521 - Gm11651 antisense antisense MGP_129S1SvImJ_T0003334.1 MGP_129S1SvImJ_G0003078.1 mouse_genomes_project 11 109237984 109253493 - Gm11651 antisense antisense MGP_129S1SvImJ_T0099032.1 MGP_129S1SvImJ_G0037103.1 mouse_genomes_project 11 100813781 100815828 + Gm20644 sense_overlapping sense_overlapping MGP_129S1SvImJ_T0029285.1 MGP_129S1SvImJ_G0018366.1 mouse_genomes_project 11 58383886 58398031 + MGP_129S1SvImJ_P0029285 Trim58 protein_coding protein_coding MGP_129S1SvImJ_T0033669.1 MGP_129S1SvImJ_G0019425.1 mouse_genomes_project 11 120441568 120520425 - MGP_129S1SvImJ_P0033669 Rnf157 protein_coding protein_coding MGP_129S1SvImJ_T0033670.1 MGP_129S1SvImJ_G0019425.1 mouse_genomes_project 11 120441568 120467267 - MGP_129S1SvImJ_P0033670 Rnf157 protein_coding protein_coding MGP_129S1SvImJ_T0033671.1 MGP_129S1SvImJ_G0019425.1 mouse_genomes_project 11 120441568 120520425 - MGP_129S1SvImJ_P0033671 Rnf157 protein_coding protein_coding MGP_129S1SvImJ_T0033672.1 MGP_129S1SvImJ_G0019425.1 mouse_genomes_project 11 120443561 120455609 - Rnf157 protein_coding processed_transcript MGP_129S1SvImJ_T0033673.1 MGP_129S1SvImJ_G0019425.1 mouse_genomes_project 11 120443628 120456083 - MGP_129S1SvImJ_P0033673 Rnf157 protein_coding protein_coding MGP_129S1SvImJ_T0033674.1 MGP_129S1SvImJ_G0019425.1 mouse_genomes_project 11 120460817 120467689 - Rnf157 protein_coding processed_transcript MGP_129S1SvImJ_T0033675.1 MGP_129S1SvImJ_G0019425.1 mouse_genomes_project 11 120462131 120463633 - Rnf157 protein_coding processed_transcript MGP_129S1SvImJ_T0033676.1 MGP_129S1SvImJ_G0019425.1 mouse_genomes_project 11 120465544 120467493 - Rnf157 protein_coding processed_transcript MGP_129S1SvImJ_T0033677.1 MGP_129S1SvImJ_G0019425.1 mouse_genomes_project 11 120467437 120468197 - Rnf157 protein_coding processed_transcript MGP_129S1SvImJ_T0033678.1 MGP_129S1SvImJ_G0019425.1 mouse_genomes_project 11 120468073 120499399 - Rnf157 protein_coding processed_transcript MGP_129S1SvImJ_T0033679.1 MGP_129S1SvImJ_G0019425.1 mouse_genomes_project 11 120510418 120520453 - Rnf157 protein_coding processed_transcript MGP_129S1SvImJ_T0003201.1 MGP_129S1SvImJ_G0002972.1 mouse_genomes_project 11 59208225 59212670 + Gm15755 antisense antisense MGP_129S1SvImJ_T0029234.1 MGP_129S1SvImJ_G0018344.1 mouse_genomes_project 11 57846897 57854806 + MGP_129S1SvImJ_P0029234 Mrpl22 protein_coding protein_coding MGP_129S1SvImJ_T0029235.1 MGP_129S1SvImJ_G0018344.1 mouse_genomes_project 11 57846922 57851443 + Mrpl22 protein_coding processed_transcript MGP_129S1SvImJ_T0029236.1 MGP_129S1SvImJ_G0018344.1 mouse_genomes_project 11 57846935 57852521 + Mrpl22 protein_coding processed_transcript MGP_129S1SvImJ_T0031642.1 MGP_129S1SvImJ_G0018940.1 mouse_genomes_project 11 92481637 92489108 + MGP_129S1SvImJ_P0031642 Cox11 protein_coding protein_coding MGP_129S1SvImJ_T0031643.1 MGP_129S1SvImJ_G0018940.1 mouse_genomes_project 11 92481652 92489487 + MGP_129S1SvImJ_P0031643 Cox11 protein_coding protein_coding MGP_129S1SvImJ_T0009787.1 MGP_129S1SvImJ_G0007903.1 mouse_genomes_project 11 124723516 124723654 + miRNA miRNA MGP_129S1SvImJ_T0031081.1 MGP_129S1SvImJ_G0018792.1 mouse_genomes_project 11 80024186 80046147 - MGP_129S1SvImJ_P0031081 Lgals9 protein_coding protein_coding MGP_129S1SvImJ_T0031082.1 MGP_129S1SvImJ_G0018792.1 mouse_genomes_project 11 80024191 80046125 - MGP_129S1SvImJ_P0031082 Lgals9 protein_coding protein_coding MGP_129S1SvImJ_T0031083.1 MGP_129S1SvImJ_G0018792.1 mouse_genomes_project 11 80024607 80046032 - MGP_129S1SvImJ_P0031083 Lgals9 protein_coding protein_coding MGP_129S1SvImJ_T0031084.1 MGP_129S1SvImJ_G0018792.1 mouse_genomes_project 11 80028093 80031543 - Lgals9 protein_coding retained_intron MGP_129S1SvImJ_T0009733.1 MGP_129S1SvImJ_G0007849.1 mouse_genomes_project 11 79795027 79795124 - Gm23840 miRNA miRNA MGP_129S1SvImJ_T0100480.1 MGP_129S1SvImJ_G0038547.1 mouse_genomes_project 11 9986739 9986880 + Gm22156 snoRNA snoRNA MGP_129S1SvImJ_T0100483.1 MGP_129S1SvImJ_G0038550.1 mouse_genomes_project 11 18414180 18414309 - Gm22807 snoRNA snoRNA MGP_129S1SvImJ_T0017261.1 MGP_129S1SvImJ_G0015193.1 mouse_genomes_project 11 87321669 87363380 - 2610027K06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017262.1 MGP_129S1SvImJ_G0015193.1 mouse_genomes_project 11 87325800 87363394 - 2610027K06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017263.1 MGP_129S1SvImJ_G0015193.1 mouse_genomes_project 11 87325886 87334120 - 2610027K06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0006201.1 MGP_129S1SvImJ_G0005180.1 mouse_genomes_project 11 20156999 20163737 + Gm12051 lincRNA lincRNA MGP_129S1SvImJ_T0012657.1 MGP_129S1SvImJ_G0010746.1 mouse_genomes_project 11 62817277 62818494 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099228.1 MGP_129S1SvImJ_G0037295.1 mouse_genomes_project 11 21235058 21235165 - Gm22753 snRNA snRNA MGP_129S1SvImJ_T0000366.1 MGP_129S1SvImJ_G0000308.1 mouse_genomes_project 11 43216704 43216757 - mt-Tk Mt_tRNA Mt_tRNA MGP_129S1SvImJ_T0099264.1 MGP_129S1SvImJ_G0037331.1 mouse_genomes_project 11 84590445 84590636 + Gm23444 snRNA snRNA MGP_129S1SvImJ_T0003237.1 MGP_129S1SvImJ_G0003001.1 mouse_genomes_project 11 69715581 69716908 + Cntrobos antisense antisense MGP_129S1SvImJ_T0031099.1 MGP_129S1SvImJ_G0018796.1 mouse_genomes_project 11 80429545 80688548 + MGP_129S1SvImJ_P0031099 Nf1 protein_coding protein_coding MGP_129S1SvImJ_T0031100.1 MGP_129S1SvImJ_G0018796.1 mouse_genomes_project 11 80429578 80692585 + MGP_129S1SvImJ_P0031100 Nf1 protein_coding protein_coding MGP_129S1SvImJ_T0031101.1 MGP_129S1SvImJ_G0018796.1 mouse_genomes_project 11 80429662 80533480 + Nf1 protein_coding retained_intron MGP_129S1SvImJ_T0031102.1 MGP_129S1SvImJ_G0018796.1 mouse_genomes_project 11 80550824 80577130 + Nf1 protein_coding processed_transcript MGP_129S1SvImJ_T0031103.1 MGP_129S1SvImJ_G0018796.1 mouse_genomes_project 11 80550824 80577130 + Nf1 protein_coding processed_transcript MGP_129S1SvImJ_T0031113.1 MGP_129S1SvImJ_G0018796.1 mouse_genomes_project 11 80645318 80679722 + Nf1 protein_coding retained_intron MGP_129S1SvImJ_T0031114.1 MGP_129S1SvImJ_G0018796.1 mouse_genomes_project 11 80654708 80689654 + MGP_129S1SvImJ_P0031114 Nf1 protein_coding protein_coding MGP_129S1SvImJ_T0012504.1 MGP_129S1SvImJ_G0010593.1 mouse_genomes_project 11 12131152 12131906 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0032138.1 MGP_129S1SvImJ_G0019060.1 mouse_genomes_project 11 100986287 100987571 - MGP_129S1SvImJ_P0032138 Mien1 protein_coding protein_coding MGP_129S1SvImJ_T0006245.1 MGP_129S1SvImJ_G0005218.1 mouse_genomes_project 11 44035234 44091910 + Gm12160 lincRNA lincRNA MGP_129S1SvImJ_T0012596.1 MGP_129S1SvImJ_G0010685.1 mouse_genomes_project 11 45484931 45485508 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012524.1 MGP_129S1SvImJ_G0010613.1 mouse_genomes_project 11 17803772 17804093 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003287.1 MGP_129S1SvImJ_G0003040.1 mouse_genomes_project 11 97568301 97577074 - Gm29477 antisense antisense MGP_129S1SvImJ_T0031121.1 MGP_129S1SvImJ_G0018803.1 mouse_genomes_project 11 81122368 81167756 + MGP_129S1SvImJ_P0031121 Suz12 protein_coding protein_coding MGP_129S1SvImJ_T0031122.1 MGP_129S1SvImJ_G0018803.1 mouse_genomes_project 11 81122368 81167757 + MGP_129S1SvImJ_P0031122 Suz12 protein_coding protein_coding MGP_129S1SvImJ_T0031123.1 MGP_129S1SvImJ_G0018803.1 mouse_genomes_project 11 81124848 81131175 + Suz12 protein_coding retained_intron MGP_129S1SvImJ_T0031124.1 MGP_129S1SvImJ_G0018803.1 mouse_genomes_project 11 81124879 81146573 + Suz12 protein_coding retained_intron MGP_129S1SvImJ_T0031125.1 MGP_129S1SvImJ_G0018803.1 mouse_genomes_project 11 81125053 81146503 + MGP_129S1SvImJ_P0031125 Suz12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031126.1 MGP_129S1SvImJ_G0018803.1 mouse_genomes_project 11 81158928 81165635 + MGP_129S1SvImJ_P0031126 Suz12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030123.1 MGP_129S1SvImJ_G0018568.1 mouse_genomes_project 11 70400824 70403514 + MGP_129S1SvImJ_P0030123 Gps2 protein_coding protein_coding MGP_129S1SvImJ_T0030124.1 MGP_129S1SvImJ_G0018568.1 mouse_genomes_project 11 70400986 70403528 + MGP_129S1SvImJ_P0030124 Gps2 protein_coding protein_coding MGP_129S1SvImJ_T0030125.1 MGP_129S1SvImJ_G0018568.1 mouse_genomes_project 11 70401128 70403529 + MGP_129S1SvImJ_P0030125 Gps2 protein_coding protein_coding MGP_129S1SvImJ_T0030126.1 MGP_129S1SvImJ_G0018568.1 mouse_genomes_project 11 70401779 70402818 + Gps2 protein_coding processed_transcript MGP_129S1SvImJ_T0030127.1 MGP_129S1SvImJ_G0018568.1 mouse_genomes_project 11 70402978 70403494 + MGP_129S1SvImJ_P0030127 Gps2 protein_coding protein_coding MGP_129S1SvImJ_T0009692.1 MGP_129S1SvImJ_G0007808.1 mouse_genomes_project 11 53181093 53181151 - Mir7671 miRNA miRNA MGP_129S1SvImJ_T0003369.1 MGP_129S1SvImJ_G0003105.1 mouse_genomes_project 11 121290711 121292831 - Gm11730 antisense antisense MGP_129S1SvImJ_T0003370.1 MGP_129S1SvImJ_G0003105.1 mouse_genomes_project 11 121290848 121292791 - Gm11730 antisense antisense MGP_129S1SvImJ_T0009666.1 MGP_129S1SvImJ_G0007782.1 mouse_genomes_project 11 18945569 18945657 - Mir1933 miRNA miRNA MGP_129S1SvImJ_T0034202.1 MGP_129S1SvImJ_G0019529.1 mouse_genomes_project 11 125277439 125287798 + MGP_129S1SvImJ_P0034202 Gps1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034203.1 MGP_129S1SvImJ_G0019529.1 mouse_genomes_project 11 125277439 125288112 + MGP_129S1SvImJ_P0034203 Gps1 protein_coding protein_coding MGP_129S1SvImJ_T0034204.1 MGP_129S1SvImJ_G0019529.1 mouse_genomes_project 11 125277469 125288117 + MGP_129S1SvImJ_P0034204 Gps1 protein_coding protein_coding MGP_129S1SvImJ_T0034205.1 MGP_129S1SvImJ_G0019529.1 mouse_genomes_project 11 125277679 125288117 + MGP_129S1SvImJ_P0034205 Gps1 protein_coding protein_coding MGP_129S1SvImJ_T0034206.1 MGP_129S1SvImJ_G0019529.1 mouse_genomes_project 11 125284190 125288121 + MGP_129S1SvImJ_P0034206 Gps1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034207.1 MGP_129S1SvImJ_G0019529.1 mouse_genomes_project 11 125284295 125285285 + Gps1 protein_coding retained_intron MGP_129S1SvImJ_T0032321.1 MGP_129S1SvImJ_G0019144.1 mouse_genomes_project 11 102937318 102945199 - MGP_129S1SvImJ_P0032321 Krt9 protein_coding protein_coding MGP_129S1SvImJ_T0030237.1 MGP_129S1SvImJ_G0018587.1 mouse_genomes_project 11 70755737 70758344 - MGP_129S1SvImJ_P0030237 0610010K14Rik protein_coding protein_coding MGP_129S1SvImJ_T0030239.1 MGP_129S1SvImJ_G0018587.1 mouse_genomes_project 11 70755745 70758454 - MGP_129S1SvImJ_P0030239 0610010K14Rik protein_coding protein_coding MGP_129S1SvImJ_T0030240.1 MGP_129S1SvImJ_G0018587.1 mouse_genomes_project 11 70755745 70758393 - MGP_129S1SvImJ_P0030240 0610010K14Rik protein_coding protein_coding MGP_129S1SvImJ_T0030241.1 MGP_129S1SvImJ_G0018587.1 mouse_genomes_project 11 70755745 70758444 - MGP_129S1SvImJ_P0030241 0610010K14Rik protein_coding protein_coding MGP_129S1SvImJ_T0030242.1 MGP_129S1SvImJ_G0018587.1 mouse_genomes_project 11 70755745 70756736 - MGP_129S1SvImJ_P0030242 0610010K14Rik protein_coding protein_coding MGP_129S1SvImJ_T0030244.1 MGP_129S1SvImJ_G0018587.1 mouse_genomes_project 11 70755901 70758218 - MGP_129S1SvImJ_P0030244 0610010K14Rik protein_coding protein_coding MGP_129S1SvImJ_T0030245.1 MGP_129S1SvImJ_G0018587.1 mouse_genomes_project 11 70755910 70758029 - 0610010K14Rik protein_coding processed_transcript MGP_129S1SvImJ_T0030246.1 MGP_129S1SvImJ_G0018587.1 mouse_genomes_project 11 70755918 70758303 - 0610010K14Rik protein_coding processed_transcript MGP_129S1SvImJ_T0030247.1 MGP_129S1SvImJ_G0018587.1 mouse_genomes_project 11 70756275 70758401 - MGP_129S1SvImJ_P0030247 0610010K14Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0030248.1 MGP_129S1SvImJ_G0018587.1 mouse_genomes_project 11 70756993 70758452 - 0610010K14Rik protein_coding retained_intron MGP_129S1SvImJ_T0030503.1 MGP_129S1SvImJ_G0018642.1 mouse_genomes_project 11 73118496 73126019 - Spns3 protein_coding processed_transcript MGP_129S1SvImJ_T0030504.1 MGP_129S1SvImJ_G0018642.1 mouse_genomes_project 11 73121728 73181459 - MGP_129S1SvImJ_P0030504 Spns3 protein_coding protein_coding MGP_129S1SvImJ_T0030505.1 MGP_129S1SvImJ_G0018642.1 mouse_genomes_project 11 73121733 73181254 - MGP_129S1SvImJ_P0030505 Spns3 protein_coding protein_coding MGP_129S1SvImJ_T0012655.1 MGP_129S1SvImJ_G0010744.1 mouse_genomes_project 11 62352589 62352890 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029886.1 MGP_129S1SvImJ_G0018513.1 mouse_genomes_project 11 69413955 69424300 + Ctc1 protein_coding retained_intron MGP_129S1SvImJ_T0029887.1 MGP_129S1SvImJ_G0018513.1 mouse_genomes_project 11 69414115 69435572 + MGP_129S1SvImJ_P0029887 Ctc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029888.1 MGP_129S1SvImJ_G0018513.1 mouse_genomes_project 11 69414126 69435569 + MGP_129S1SvImJ_P0029888 Ctc1 protein_coding protein_coding MGP_129S1SvImJ_T0029889.1 MGP_129S1SvImJ_G0018513.1 mouse_genomes_project 11 69414162 69435574 + MGP_129S1SvImJ_P0029889 Ctc1 protein_coding protein_coding MGP_129S1SvImJ_T0029890.1 MGP_129S1SvImJ_G0018513.1 mouse_genomes_project 11 69414163 69421902 + Ctc1 protein_coding processed_transcript MGP_129S1SvImJ_T0029891.1 MGP_129S1SvImJ_G0018513.1 mouse_genomes_project 11 69426827 69428352 + Ctc1 protein_coding retained_intron MGP_129S1SvImJ_T0029892.1 MGP_129S1SvImJ_G0018513.1 mouse_genomes_project 11 69428213 69430709 + Ctc1 protein_coding processed_transcript MGP_129S1SvImJ_T0029893.1 MGP_129S1SvImJ_G0018513.1 mouse_genomes_project 11 69430389 69434047 + Ctc1 protein_coding processed_transcript MGP_129S1SvImJ_T0029894.1 MGP_129S1SvImJ_G0018513.1 mouse_genomes_project 11 69432973 69434920 + Ctc1 protein_coding retained_intron MGP_129S1SvImJ_T0029895.1 MGP_129S1SvImJ_G0018513.1 mouse_genomes_project 11 69433619 69434905 + Ctc1 protein_coding retained_intron MGP_129S1SvImJ_T0029896.1 MGP_129S1SvImJ_G0018513.1 mouse_genomes_project 11 69433977 69435279 + Ctc1 protein_coding retained_intron MGP_129S1SvImJ_T0009760.1 MGP_129S1SvImJ_G0007876.1 mouse_genomes_project 11 103840690 103840760 + Mir6928 miRNA miRNA MGP_129S1SvImJ_T0012513.1 MGP_129S1SvImJ_G0010602.1 mouse_genomes_project 11 15061797 15062481 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0027828.1 MGP_129S1SvImJ_G0017989.1 mouse_genomes_project 11 1750784 1841811 - MGP_129S1SvImJ_P0027828 Nf2 protein_coding protein_coding MGP_129S1SvImJ_T0027829.1 MGP_129S1SvImJ_G0017989.1 mouse_genomes_project 11 1750786 1842367 - MGP_129S1SvImJ_P0027829 Nf2 protein_coding protein_coding MGP_129S1SvImJ_T0027830.1 MGP_129S1SvImJ_G0017989.1 mouse_genomes_project 11 1752890 1769329 - Nf2 protein_coding retained_intron MGP_129S1SvImJ_T0027831.1 MGP_129S1SvImJ_G0017989.1 mouse_genomes_project 11 1766157 1825566 - Nf2 protein_coding processed_transcript MGP_129S1SvImJ_T0027832.1 MGP_129S1SvImJ_G0017989.1 mouse_genomes_project 11 1768657 1803660 - MGP_129S1SvImJ_P0027832 Nf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027833.1 MGP_129S1SvImJ_G0017989.1 mouse_genomes_project 11 1775402 1842020 - MGP_129S1SvImJ_P0027833 Nf2 protein_coding protein_coding MGP_129S1SvImJ_T0027834.1 MGP_129S1SvImJ_G0017989.1 mouse_genomes_project 11 1778612 1802735 - Nf2 protein_coding processed_transcript MGP_129S1SvImJ_T0027835.1 MGP_129S1SvImJ_G0017989.1 mouse_genomes_project 11 1778661 1806042 - MGP_129S1SvImJ_P0027835 Nf2 protein_coding protein_coding MGP_129S1SvImJ_T0027836.1 MGP_129S1SvImJ_G0017989.1 mouse_genomes_project 11 1785922 1807888 - MGP_129S1SvImJ_P0027836 Nf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0027837.1 MGP_129S1SvImJ_G0017989.1 mouse_genomes_project 11 1805999 1815009 - Nf2 protein_coding processed_transcript MGP_129S1SvImJ_T0027838.1 MGP_129S1SvImJ_G0017989.1 mouse_genomes_project 11 1819918 1841951 - MGP_129S1SvImJ_P0027838 Nf2 protein_coding protein_coding MGP_129S1SvImJ_T0009704.1 MGP_129S1SvImJ_G0007820.1 mouse_genomes_project 11 67380505 67380577 + Mir6923 miRNA miRNA MGP_129S1SvImJ_T0031212.1 MGP_129S1SvImJ_G0018830.1 mouse_genomes_project 11 84055831 84077586 + MGP_129S1SvImJ_P0031212 Lig3 protein_coding protein_coding MGP_129S1SvImJ_T0031213.1 MGP_129S1SvImJ_G0018830.1 mouse_genomes_project 11 84055858 84078998 + MGP_129S1SvImJ_P0031213 Lig3 protein_coding protein_coding MGP_129S1SvImJ_T0031214.1 MGP_129S1SvImJ_G0018830.1 mouse_genomes_project 11 84055865 84071265 + Lig3 protein_coding retained_intron MGP_129S1SvImJ_T0031215.1 MGP_129S1SvImJ_G0018830.1 mouse_genomes_project 11 84055908 84075377 + MGP_129S1SvImJ_P0031215 Lig3 protein_coding protein_coding MGP_129S1SvImJ_T0031216.1 MGP_129S1SvImJ_G0018830.1 mouse_genomes_project 11 84055916 84076749 + MGP_129S1SvImJ_P0031216 Lig3 protein_coding protein_coding MGP_129S1SvImJ_T0031217.1 MGP_129S1SvImJ_G0018830.1 mouse_genomes_project 11 84055916 84076750 + MGP_129S1SvImJ_P0031217 Lig3 protein_coding protein_coding MGP_129S1SvImJ_T0031218.1 MGP_129S1SvImJ_G0018830.1 mouse_genomes_project 11 84055921 84065028 + MGP_129S1SvImJ_P0031218 Lig3 protein_coding protein_coding MGP_129S1SvImJ_T0031219.1 MGP_129S1SvImJ_G0018830.1 mouse_genomes_project 11 84055921 84065029 + MGP_129S1SvImJ_P0031219 Lig3 protein_coding protein_coding MGP_129S1SvImJ_T0031220.1 MGP_129S1SvImJ_G0018830.1 mouse_genomes_project 11 84055926 84078922 + MGP_129S1SvImJ_P0031220 Lig3 protein_coding protein_coding MGP_129S1SvImJ_T0031221.1 MGP_129S1SvImJ_G0018830.1 mouse_genomes_project 11 84070408 84074274 + Lig3 protein_coding retained_intron MGP_129S1SvImJ_T0031222.1 MGP_129S1SvImJ_G0018830.1 mouse_genomes_project 11 84071941 84074291 + Lig3 protein_coding retained_intron MGP_129S1SvImJ_T0031223.1 MGP_129S1SvImJ_G0018830.1 mouse_genomes_project 11 84073072 84078998 + MGP_129S1SvImJ_P0031223 Lig3 protein_coding protein_coding MGP_129S1SvImJ_T0006257.1 MGP_129S1SvImJ_G0005228.1 mouse_genomes_project 11 53646458 53681384 - 4933405E24Rik lincRNA lincRNA MGP_129S1SvImJ_T0099283.1 MGP_129S1SvImJ_G0037350.1 mouse_genomes_project 11 101573919 101574026 + Gm22061 snRNA snRNA MGP_129S1SvImJ_T0031852.1 MGP_129S1SvImJ_G0018989.1 mouse_genomes_project 11 98060947 98068395 + MGP_129S1SvImJ_P0031852 Phospho1 protein_coding protein_coding MGP_129S1SvImJ_T0031853.1 MGP_129S1SvImJ_G0018989.1 mouse_genomes_project 11 98060948 98071097 + MGP_129S1SvImJ_P0031853 Phospho1 protein_coding protein_coding MGP_129S1SvImJ_T0031855.1 MGP_129S1SvImJ_G0018989.1 mouse_genomes_project 11 98068456 98069286 + MGP_129S1SvImJ_P0031855 Phospho1 protein_coding protein_coding MGP_129S1SvImJ_T0003135.1 MGP_129S1SvImJ_G0002917.1 mouse_genomes_project 11 3598059 3614858 + Gm11973 antisense antisense MGP_129S1SvImJ_T0003136.1 MGP_129S1SvImJ_G0002917.1 mouse_genomes_project 11 3598099 3617248 + Gm11973 antisense antisense MGP_129S1SvImJ_T0003137.1 MGP_129S1SvImJ_G0002917.1 mouse_genomes_project 11 3598111 3617248 + Gm11973 antisense antisense MGP_129S1SvImJ_T0028486.1 MGP_129S1SvImJ_G0018134.1 mouse_genomes_project 11 30567387 30653190 + MGP_129S1SvImJ_P0028486 Sh3pxd2b protein_coding protein_coding MGP_129S1SvImJ_T0028487.1 MGP_129S1SvImJ_G0018134.1 mouse_genomes_project 11 30567407 30614737 + Sh3pxd2b protein_coding retained_intron MGP_129S1SvImJ_T0017231.1 MGP_129S1SvImJ_G0015176.1 mouse_genomes_project 11 59575519 59582375 - 1700007J10Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017232.1 MGP_129S1SvImJ_G0015176.1 mouse_genomes_project 11 59575519 59589666 - 1700007J10Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0098807.1 MGP_129S1SvImJ_G0036891.1 mouse_genomes_project 11 33728041 33728758 + Gm12122 sense_intronic sense_intronic MGP_129S1SvImJ_T0028731.1 MGP_129S1SvImJ_G0018206.1 mouse_genomes_project 11 47867907 47880980 + MGP_129S1SvImJ_P0028731 protein_coding protein_coding MGP_129S1SvImJ_T0028732.1 MGP_129S1SvImJ_G0018206.1 mouse_genomes_project 11 47867913 47871858 + MGP_129S1SvImJ_P0028732 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0028733.1 MGP_129S1SvImJ_G0018206.1 mouse_genomes_project 11 47868956 47875972 + MGP_129S1SvImJ_P0028733 protein_coding protein_coding MGP_129S1SvImJ_T0028734.1 MGP_129S1SvImJ_G0018206.1 mouse_genomes_project 11 47869246 47876029 + MGP_129S1SvImJ_P0028734 protein_coding protein_coding MGP_129S1SvImJ_T0028735.1 MGP_129S1SvImJ_G0018206.1 mouse_genomes_project 11 47869279 47881723 + MGP_129S1SvImJ_P0028735 protein_coding protein_coding MGP_129S1SvImJ_T0028736.1 MGP_129S1SvImJ_G0018206.1 mouse_genomes_project 11 47878326 47882745 + protein_coding retained_intron MGP_129S1SvImJ_T0012559.1 MGP_129S1SvImJ_G0010648.1 mouse_genomes_project 11 27710664 27712259 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029182.1 MGP_129S1SvImJ_G0018327.1 mouse_genomes_project 11 54672453 54699157 - MGP_129S1SvImJ_P0029182 Slc36a2 protein_coding protein_coding MGP_129S1SvImJ_T0029183.1 MGP_129S1SvImJ_G0018327.1 mouse_genomes_project 11 54682080 54699157 - Slc36a2 protein_coding processed_transcript MGP_129S1SvImJ_T0028134.1 MGP_129S1SvImJ_G0018055.1 mouse_genomes_project 11 14446217 14449626 + MGP_129S1SvImJ_P0028134 Cnrip1 protein_coding protein_coding MGP_129S1SvImJ_T0028135.1 MGP_129S1SvImJ_G0018055.1 mouse_genomes_project 11 14446434 14448864 + Cnrip1 protein_coding retained_intron MGP_129S1SvImJ_T0028136.1 MGP_129S1SvImJ_G0018055.1 mouse_genomes_project 11 14446449 14474271 + MGP_129S1SvImJ_P0028136 Cnrip1 protein_coding protein_coding MGP_129S1SvImJ_T0032917.1 MGP_129S1SvImJ_G0019267.1 mouse_genomes_project 11 106780113 106800939 - MGP_129S1SvImJ_P0032917 Gosr2 protein_coding protein_coding MGP_129S1SvImJ_T0032918.1 MGP_129S1SvImJ_G0019267.1 mouse_genomes_project 11 106781874 106800735 - MGP_129S1SvImJ_P0032918 Gosr2 protein_coding protein_coding MGP_129S1SvImJ_T0032919.1 MGP_129S1SvImJ_G0019267.1 mouse_genomes_project 11 106782081 106800739 - Gosr2 protein_coding processed_transcript MGP_129S1SvImJ_T0028213.1 MGP_129S1SvImJ_G0018075.1 mouse_genomes_project 11 19638561 19645480 - MGP_129S1SvImJ_P0028213 Otx1 protein_coding protein_coding MGP_129S1SvImJ_T0028214.1 MGP_129S1SvImJ_G0018075.1 mouse_genomes_project 11 19638566 19645575 - Otx1 protein_coding retained_intron MGP_129S1SvImJ_T0028215.1 MGP_129S1SvImJ_G0018075.1 mouse_genomes_project 11 19640718 19646766 - MGP_129S1SvImJ_P0028215 Otx1 protein_coding protein_coding MGP_129S1SvImJ_T0012593.1 MGP_129S1SvImJ_G0010682.1 mouse_genomes_project 11 43320584 43321587 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031167.1 MGP_129S1SvImJ_G0018813.1 mouse_genomes_project 11 81590624 81598049 + Psmd11 protein_coding retained_intron MGP_129S1SvImJ_T0031168.1 MGP_129S1SvImJ_G0018813.1 mouse_genomes_project 11 81590632 81637771 + MGP_129S1SvImJ_P0031168 Psmd11 protein_coding protein_coding MGP_129S1SvImJ_T0031169.1 MGP_129S1SvImJ_G0018813.1 mouse_genomes_project 11 81590634 81639032 + MGP_129S1SvImJ_P0031169 Psmd11 protein_coding protein_coding MGP_129S1SvImJ_T0031170.1 MGP_129S1SvImJ_G0018813.1 mouse_genomes_project 11 81590653 81638168 + Psmd11 protein_coding retained_intron MGP_129S1SvImJ_T0031171.1 MGP_129S1SvImJ_G0018813.1 mouse_genomes_project 11 81590655 81609849 + MGP_129S1SvImJ_P0031171 Psmd11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031172.1 MGP_129S1SvImJ_G0018813.1 mouse_genomes_project 11 81590674 81625881 + MGP_129S1SvImJ_P0031172 Psmd11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031173.1 MGP_129S1SvImJ_G0018813.1 mouse_genomes_project 11 81590695 81637401 + MGP_129S1SvImJ_P0031173 Psmd11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031174.1 MGP_129S1SvImJ_G0018813.1 mouse_genomes_project 11 81590695 81634538 + MGP_129S1SvImJ_P0031174 Psmd11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031175.1 MGP_129S1SvImJ_G0018813.1 mouse_genomes_project 11 81590695 81621442 + MGP_129S1SvImJ_P0031175 Psmd11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031176.1 MGP_129S1SvImJ_G0018813.1 mouse_genomes_project 11 81590699 81621623 + MGP_129S1SvImJ_P0031176 Psmd11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0031177.1 MGP_129S1SvImJ_G0018813.1 mouse_genomes_project 11 81591896 81621627 + MGP_129S1SvImJ_P0031177 Psmd11 protein_coding protein_coding MGP_129S1SvImJ_T0031178.1 MGP_129S1SvImJ_G0018813.1 mouse_genomes_project 11 81621567 81637737 + MGP_129S1SvImJ_P0031178 Psmd11 protein_coding protein_coding MGP_129S1SvImJ_T0031179.1 MGP_129S1SvImJ_G0018813.1 mouse_genomes_project 11 81625898 81637576 + MGP_129S1SvImJ_P0031179 Psmd11 protein_coding protein_coding MGP_129S1SvImJ_T0031180.1 MGP_129S1SvImJ_G0018813.1 mouse_genomes_project 11 81627789 81639032 + MGP_129S1SvImJ_P0031180 Psmd11 protein_coding protein_coding MGP_129S1SvImJ_T0031181.1 MGP_129S1SvImJ_G0018813.1 mouse_genomes_project 11 81627793 81637503 + MGP_129S1SvImJ_P0031181 Psmd11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029401.1 MGP_129S1SvImJ_G0018409.1 mouse_genomes_project 11 59805265 59819260 + MGP_129S1SvImJ_P0029401 Med9 protein_coding protein_coding MGP_129S1SvImJ_T0028206.1 MGP_129S1SvImJ_G0018074.1 mouse_genomes_project 11 19205583 19299538 + MGP_129S1SvImJ_P0028206 Wdpcp protein_coding protein_coding MGP_129S1SvImJ_T0028207.1 MGP_129S1SvImJ_G0018074.1 mouse_genomes_project 11 19205583 19539570 + MGP_129S1SvImJ_P0028207 Wdpcp protein_coding protein_coding MGP_129S1SvImJ_T0028208.1 MGP_129S1SvImJ_G0018074.1 mouse_genomes_project 11 19205653 19333782 + Wdpcp protein_coding processed_transcript MGP_129S1SvImJ_T0028209.1 MGP_129S1SvImJ_G0018074.1 mouse_genomes_project 11 19320063 19538317 + MGP_129S1SvImJ_P0028209 Wdpcp protein_coding unknown_likely_coding MGP_129S1SvImJ_T0028210.1 MGP_129S1SvImJ_G0018074.1 mouse_genomes_project 11 19325794 19348748 + Wdpcp protein_coding processed_transcript MGP_129S1SvImJ_T0028211.1 MGP_129S1SvImJ_G0018074.1 mouse_genomes_project 11 19331342 19389230 + Wdpcp protein_coding processed_transcript MGP_129S1SvImJ_T0028212.1 MGP_129S1SvImJ_G0018074.1 mouse_genomes_project 11 19452226 19458360 + Wdpcp protein_coding processed_transcript MGP_129S1SvImJ_T0031789.1 MGP_129S1SvImJ_G0018972.1 mouse_genomes_project 11 97150741 97151605 + MGP_129S1SvImJ_P0031789 Hils1 protein_coding protein_coding MGP_129S1SvImJ_T0032078.1 MGP_129S1SvImJ_G0019045.1 mouse_genomes_project 11 100410727 100476037 - MGP_129S1SvImJ_P0032078 Plxdc1 protein_coding protein_coding MGP_129S1SvImJ_T0032079.1 MGP_129S1SvImJ_G0019045.1 mouse_genomes_project 11 100411145 100475992 - MGP_129S1SvImJ_P0032079 Plxdc1 protein_coding protein_coding MGP_129S1SvImJ_T0032080.1 MGP_129S1SvImJ_G0019045.1 mouse_genomes_project 11 100424291 100476026 - Plxdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0032081.1 MGP_129S1SvImJ_G0019045.1 mouse_genomes_project 11 100468142 100476023 - MGP_129S1SvImJ_P0032081 Plxdc1 protein_coding protein_coding MGP_129S1SvImJ_T0099219.1 MGP_129S1SvImJ_G0037286.1 mouse_genomes_project 11 544421 544550 - Gm26393 snRNA snRNA MGP_129S1SvImJ_T0028916.1 MGP_129S1SvImJ_G0018264.1 mouse_genomes_project 11 50262915 50274694 + MGP_129S1SvImJ_P0028916 Zfp354a protein_coding protein_coding MGP_129S1SvImJ_T0028917.1 MGP_129S1SvImJ_G0018264.1 mouse_genomes_project 11 50262917 50263730 + Zfp354a protein_coding processed_transcript MGP_129S1SvImJ_T0028918.1 MGP_129S1SvImJ_G0018264.1 mouse_genomes_project 11 50262952 50276132 + MGP_129S1SvImJ_P0028918 Zfp354a protein_coding protein_coding MGP_129S1SvImJ_T0029517.1 MGP_129S1SvImJ_G0018433.1 mouse_genomes_project 11 61099491 61122756 - MGP_129S1SvImJ_P0029517 Usp22 protein_coding protein_coding MGP_129S1SvImJ_T0029518.1 MGP_129S1SvImJ_G0018433.1 mouse_genomes_project 11 61101719 61105093 - Usp22 protein_coding retained_intron MGP_129S1SvImJ_T0029519.1 MGP_129S1SvImJ_G0018433.1 mouse_genomes_project 11 61103410 61107085 - Usp22 protein_coding retained_intron MGP_129S1SvImJ_T0029520.1 MGP_129S1SvImJ_G0018433.1 mouse_genomes_project 11 61109095 61115976 - MGP_129S1SvImJ_P0029520 Usp22 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029521.1 MGP_129S1SvImJ_G0018433.1 mouse_genomes_project 11 61110472 61122730 - Usp22 protein_coding retained_intron MGP_129S1SvImJ_T0017279.1 MGP_129S1SvImJ_G0015202.1 mouse_genomes_project 11 100046043 100072075 + 2410003L11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017280.1 MGP_129S1SvImJ_G0015202.1 mouse_genomes_project 11 100063535 100067595 + 2410003L11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0030713.1 MGP_129S1SvImJ_G0018712.1 mouse_genomes_project 11 76186428 76201532 - MGP_129S1SvImJ_P0030713 Wdr81 protein_coding protein_coding MGP_129S1SvImJ_T0030714.1 MGP_129S1SvImJ_G0018712.1 mouse_genomes_project 11 76186432 76198176 - MGP_129S1SvImJ_P0030714 Wdr81 protein_coding protein_coding MGP_129S1SvImJ_T0030715.1 MGP_129S1SvImJ_G0018712.1 mouse_genomes_project 11 76193649 76195263 - Wdr81 protein_coding processed_transcript MGP_129S1SvImJ_T0032603.1 MGP_129S1SvImJ_G0019208.1 mouse_genomes_project 11 104466808 104477573 + MGP_129S1SvImJ_P0032603 Tmem106a protein_coding protein_coding MGP_129S1SvImJ_T0032604.1 MGP_129S1SvImJ_G0019208.1 mouse_genomes_project 11 104466808 104477573 + MGP_129S1SvImJ_P0032604 Tmem106a protein_coding protein_coding MGP_129S1SvImJ_T0032605.1 MGP_129S1SvImJ_G0019208.1 mouse_genomes_project 11 104466810 104475219 + Tmem106a protein_coding processed_transcript MGP_129S1SvImJ_T0032606.1 MGP_129S1SvImJ_G0019208.1 mouse_genomes_project 11 104466823 104474725 + MGP_129S1SvImJ_P0032606 Tmem106a protein_coding protein_coding MGP_129S1SvImJ_T0032607.1 MGP_129S1SvImJ_G0019208.1 mouse_genomes_project 11 104466866 104474680 + MGP_129S1SvImJ_P0032607 Tmem106a protein_coding protein_coding MGP_129S1SvImJ_T0032608.1 MGP_129S1SvImJ_G0019208.1 mouse_genomes_project 11 104471803 104476551 + Tmem106a protein_coding processed_transcript MGP_129S1SvImJ_T0028226.1 MGP_129S1SvImJ_G0018080.1 mouse_genomes_project 11 20536876 20564540 - MGP_129S1SvImJ_P0028226 B3gnt2 protein_coding protein_coding MGP_129S1SvImJ_T0028227.1 MGP_129S1SvImJ_G0018080.1 mouse_genomes_project 11 20536994 20564927 - MGP_129S1SvImJ_P0028227 B3gnt2 protein_coding protein_coding MGP_129S1SvImJ_T0028228.1 MGP_129S1SvImJ_G0018080.1 mouse_genomes_project 11 20538712 20565389 - MGP_129S1SvImJ_P0028228 B3gnt2 protein_coding protein_coding MGP_129S1SvImJ_T0029441.1 MGP_129S1SvImJ_G0018415.1 mouse_genomes_project 11 60227812 60247742 + MGP_129S1SvImJ_P0029441 Lrrc48 protein_coding protein_coding MGP_129S1SvImJ_T0029442.1 MGP_129S1SvImJ_G0018415.1 mouse_genomes_project 11 60227812 60271473 + MGP_129S1SvImJ_P0029442 Lrrc48 protein_coding protein_coding MGP_129S1SvImJ_T0029443.1 MGP_129S1SvImJ_G0018415.1 mouse_genomes_project 11 60227812 60252790 + MGP_129S1SvImJ_P0029443 Lrrc48 protein_coding protein_coding MGP_129S1SvImJ_T0029444.1 MGP_129S1SvImJ_G0018415.1 mouse_genomes_project 11 60227840 60250651 + Lrrc48 protein_coding processed_transcript MGP_129S1SvImJ_T0029445.1 MGP_129S1SvImJ_G0018415.1 mouse_genomes_project 11 60227863 60271465 + MGP_129S1SvImJ_P0029445 Lrrc48 protein_coding protein_coding MGP_129S1SvImJ_T0034014.1 MGP_129S1SvImJ_G0019492.1 mouse_genomes_project 11 124542867 124591938 - MGP_129S1SvImJ_P0034014 Slc38a10 protein_coding protein_coding MGP_129S1SvImJ_T0034015.1 MGP_129S1SvImJ_G0019492.1 mouse_genomes_project 11 124542867 124591938 - MGP_129S1SvImJ_P0034015 Slc38a10 protein_coding protein_coding MGP_129S1SvImJ_T0034016.1 MGP_129S1SvImJ_G0019492.1 mouse_genomes_project 11 124543359 124591904 - MGP_129S1SvImJ_P0034016 Slc38a10 protein_coding protein_coding MGP_129S1SvImJ_T0034017.1 MGP_129S1SvImJ_G0019492.1 mouse_genomes_project 11 124544528 124545896 - Slc38a10 protein_coding processed_transcript MGP_129S1SvImJ_T0034018.1 MGP_129S1SvImJ_G0019492.1 mouse_genomes_project 11 124544585 124547496 - Slc38a10 protein_coding processed_transcript MGP_129S1SvImJ_T0034019.1 MGP_129S1SvImJ_G0019492.1 mouse_genomes_project 11 124544699 124549354 - Slc38a10 protein_coding processed_transcript MGP_129S1SvImJ_T0034020.1 MGP_129S1SvImJ_G0019492.1 mouse_genomes_project 11 124544712 124549366 - Slc38a10 protein_coding processed_transcript MGP_129S1SvImJ_T0034021.1 MGP_129S1SvImJ_G0019492.1 mouse_genomes_project 11 124544780 124549235 - Slc38a10 protein_coding processed_transcript MGP_129S1SvImJ_T0034022.1 MGP_129S1SvImJ_G0019492.1 mouse_genomes_project 11 124547444 124549246 - Slc38a10 protein_coding processed_transcript MGP_129S1SvImJ_T0034023.1 MGP_129S1SvImJ_G0019492.1 mouse_genomes_project 11 124549911 124591871 - Slc38a10 protein_coding processed_transcript MGP_129S1SvImJ_T0034024.1 MGP_129S1SvImJ_G0019492.1 mouse_genomes_project 11 124557779 124591938 - MGP_129S1SvImJ_P0034024 Slc38a10 protein_coding protein_coding MGP_129S1SvImJ_T0034025.1 MGP_129S1SvImJ_G0019492.1 mouse_genomes_project 11 124562751 124591938 - MGP_129S1SvImJ_P0034025 Slc38a10 protein_coding protein_coding MGP_129S1SvImJ_T0034026.1 MGP_129S1SvImJ_G0019492.1 mouse_genomes_project 11 124573513 124591912 - Slc38a10 protein_coding processed_transcript MGP_129S1SvImJ_T0034027.1 MGP_129S1SvImJ_G0019492.1 mouse_genomes_project 11 124575399 124591879 - Slc38a10 protein_coding processed_transcript MGP_129S1SvImJ_T0034028.1 MGP_129S1SvImJ_G0019492.1 mouse_genomes_project 11 124578562 124591914 - Slc38a10 protein_coding processed_transcript MGP_129S1SvImJ_T0034029.1 MGP_129S1SvImJ_G0019492.1 mouse_genomes_project 11 124579701 124583377 - Slc38a10 protein_coding processed_transcript MGP_129S1SvImJ_T0012734.1 MGP_129S1SvImJ_G0010823.1 mouse_genomes_project 11 97662078 97662254 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0031890.1 MGP_129S1SvImJ_G0019001.1 mouse_genomes_project 11 98581752 98586889 + MGP_129S1SvImJ_P0031890 Hoxb9 protein_coding protein_coding MGP_129S1SvImJ_T0031891.1 MGP_129S1SvImJ_G0019001.1 mouse_genomes_project 11 98581818 98586889 + MGP_129S1SvImJ_P0031891 Hoxb9 protein_coding protein_coding MGP_129S1SvImJ_T0012674.1 MGP_129S1SvImJ_G0010763.1 mouse_genomes_project 11 71052430 71052749 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009783.1 MGP_129S1SvImJ_G0007899.1 mouse_genomes_project 11 123791512 123791602 + Mir1932 miRNA miRNA MGP_129S1SvImJ_T0029879.1 MGP_129S1SvImJ_G0018512.1 mouse_genomes_project 11 69381716 69404695 - MGP_129S1SvImJ_P0029879 Pfas protein_coding protein_coding MGP_129S1SvImJ_T0029880.1 MGP_129S1SvImJ_G0018512.1 mouse_genomes_project 11 69381719 69390242 - Pfas protein_coding retained_intron MGP_129S1SvImJ_T0029881.1 MGP_129S1SvImJ_G0018512.1 mouse_genomes_project 11 69382479 69386569 - Pfas protein_coding retained_intron MGP_129S1SvImJ_T0029882.1 MGP_129S1SvImJ_G0018512.1 mouse_genomes_project 11 69383930 69387315 - MGP_129S1SvImJ_P0029882 Pfas protein_coding protein_coding MGP_129S1SvImJ_T0029883.1 MGP_129S1SvImJ_G0018512.1 mouse_genomes_project 11 69386683 69387791 - Pfas protein_coding retained_intron MGP_129S1SvImJ_T0029884.1 MGP_129S1SvImJ_G0018512.1 mouse_genomes_project 11 69388947 69393631 - MGP_129S1SvImJ_P0029884 Pfas protein_coding protein_coding MGP_129S1SvImJ_T0029885.1 MGP_129S1SvImJ_G0018512.1 mouse_genomes_project 11 69392920 69404686 - Pfas protein_coding retained_intron MGP_129S1SvImJ_T0012732.1 MGP_129S1SvImJ_G0010821.1 mouse_genomes_project 11 95717174 95717644 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0028558.1 MGP_129S1SvImJ_G0018159.1 mouse_genomes_project 11 34430102 35707662 - MGP_129S1SvImJ_P0028558 Tenm2 protein_coding protein_coding MGP_129S1SvImJ_T0028559.1 MGP_129S1SvImJ_G0018159.1 mouse_genomes_project 11 34431108 35401446 - MGP_129S1SvImJ_P0028559 Tenm2 protein_coding protein_coding MGP_129S1SvImJ_T0028560.1 MGP_129S1SvImJ_G0018159.1 mouse_genomes_project 11 34431481 35401446 - MGP_129S1SvImJ_P0028560 Tenm2 protein_coding protein_coding MGP_129S1SvImJ_T0028561.1 MGP_129S1SvImJ_G0018159.1 mouse_genomes_project 11 34571629 35401446 - Tenm2 protein_coding processed_transcript MGP_129S1SvImJ_T0028562.1 MGP_129S1SvImJ_G0018159.1 mouse_genomes_project 11 34572901 35121433 - Tenm2 protein_coding processed_transcript MGP_129S1SvImJ_T0028563.1 MGP_129S1SvImJ_G0018159.1 mouse_genomes_project 11 34598000 34933325 - Tenm2 protein_coding processed_transcript MGP_129S1SvImJ_T0028564.1 MGP_129S1SvImJ_G0018159.1 mouse_genomes_project 11 34821385 34868393 - Tenm2 protein_coding processed_transcript MGP_129S1SvImJ_T0028565.1 MGP_129S1SvImJ_G0018159.1 mouse_genomes_project 11 35401484 35707744 - Tenm2 protein_coding processed_transcript MGP_129S1SvImJ_T0029734.1 MGP_129S1SvImJ_G0018477.1 mouse_genomes_project 11 65899409 66007235 - MGP_129S1SvImJ_P0029734 Map2k4 protein_coding protein_coding MGP_129S1SvImJ_T0029735.1 MGP_129S1SvImJ_G0018477.1 mouse_genomes_project 11 65901499 65931465 - MGP_129S1SvImJ_P0029735 Map2k4 protein_coding protein_coding MGP_129S1SvImJ_T0029736.1 MGP_129S1SvImJ_G0018477.1 mouse_genomes_project 11 65902894 65908180 - Map2k4 protein_coding processed_transcript MGP_129S1SvImJ_T0029737.1 MGP_129S1SvImJ_G0018477.1 mouse_genomes_project 11 65907453 66007223 - MGP_129S1SvImJ_P0029737 Map2k4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029738.1 MGP_129S1SvImJ_G0018477.1 mouse_genomes_project 11 65924085 66007224 - MGP_129S1SvImJ_P0029738 Map2k4 protein_coding protein_coding MGP_129S1SvImJ_T0029739.1 MGP_129S1SvImJ_G0018477.1 mouse_genomes_project 11 65924086 66007223 - MGP_129S1SvImJ_P0029739 Map2k4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0029740.1 MGP_129S1SvImJ_G0018477.1 mouse_genomes_project 11 65931400 65958048 - Map2k4 protein_coding processed_transcript MGP_129S1SvImJ_T0032882.1 MGP_129S1SvImJ_G0019258.1 mouse_genomes_project 11 106226998 106256463 + MGP_129S1SvImJ_P0032882 Fmnl1 protein_coding protein_coding MGP_129S1SvImJ_T0032883.1 MGP_129S1SvImJ_G0019258.1 mouse_genomes_project 11 106227204 106256457 + MGP_129S1SvImJ_P0032883 Fmnl1 protein_coding protein_coding MGP_129S1SvImJ_T0032884.1 MGP_129S1SvImJ_G0019258.1 mouse_genomes_project 11 106227204 106256470 + MGP_129S1SvImJ_P0032884 Fmnl1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0032885.1 MGP_129S1SvImJ_G0019258.1 mouse_genomes_project 11 106238278 106247948 + Fmnl1 protein_coding processed_transcript MGP_129S1SvImJ_T0032886.1 MGP_129S1SvImJ_G0019258.1 mouse_genomes_project 11 106242815 106248238 + Fmnl1 protein_coding processed_transcript MGP_129S1SvImJ_T0032887.1 MGP_129S1SvImJ_G0019258.1 mouse_genomes_project 11 106249889 106256457 + Fmnl1 protein_coding retained_intron MGP_129S1SvImJ_T0032888.1 MGP_129S1SvImJ_G0019258.1 mouse_genomes_project 11 106254378 106255454 + MGP_129S1SvImJ_P0032888 Fmnl1 protein_coding protein_coding MGP_129S1SvImJ_T0028907.1 MGP_129S1SvImJ_G0018258.1 mouse_genomes_project 11 50139166 50142221 - MGP_129S1SvImJ_P0028907 4933414I15Rik protein_coding protein_coding MGP_129S1SvImJ_T0028908.1 MGP_129S1SvImJ_G0018258.1 mouse_genomes_project 11 50140153 50142197 - 4933414I15Rik protein_coding processed_transcript MGP_129S1SvImJ_T0030897.1 MGP_129S1SvImJ_G0018752.1 mouse_genomes_project 11 78444886 78529783 - MGP_129S1SvImJ_P0030897 Taok1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0017223.1 MGP_129S1SvImJ_G0015173.1 mouse_genomes_project 11 58747697 58759971 - 2310058D17Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0012492.1 MGP_129S1SvImJ_G0010581.1 mouse_genomes_project 11 6029321 6031809 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0029862.1 MGP_129S1SvImJ_G0018509.1 mouse_genomes_project 11 69332189 69345435 - MGP_129S1SvImJ_P0029862 Arhgef15 protein_coding protein_coding MGP_129S1SvImJ_T0029863.1 MGP_129S1SvImJ_G0018509.1 mouse_genomes_project 11 69332191 69347844 - MGP_129S1SvImJ_P0029863 Arhgef15 protein_coding protein_coding MGP_129S1SvImJ_T0029864.1 MGP_129S1SvImJ_G0018509.1 mouse_genomes_project 11 69333559 69336413 - Arhgef15 protein_coding processed_transcript MGP_129S1SvImJ_T0029865.1 MGP_129S1SvImJ_G0018509.1 mouse_genomes_project 11 69335333 69336782 - Arhgef15 protein_coding processed_transcript MGP_129S1SvImJ_T0029866.1 MGP_129S1SvImJ_G0018509.1 mouse_genomes_project 11 69335479 69336622 - Arhgef15 protein_coding processed_transcript MGP_129S1SvImJ_T0029867.1 MGP_129S1SvImJ_G0018509.1 mouse_genomes_project 11 69338592 69342535 - Arhgef15 protein_coding retained_intron MGP_129S1SvImJ_T0031841.1 MGP_129S1SvImJ_G0018986.1 mouse_genomes_project 11 97879295 97898120 + MGP_129S1SvImJ_P0031841 Phb protein_coding protein_coding MGP_129S1SvImJ_T0031842.1 MGP_129S1SvImJ_G0018986.1 mouse_genomes_project 11 97879337 97883980 + Phb protein_coding processed_transcript MGP_129S1SvImJ_T0031843.1 MGP_129S1SvImJ_G0018986.1 mouse_genomes_project 11 97879343 97898118 + MGP_129S1SvImJ_P0031843 Phb protein_coding unknown_likely_coding MGP_129S1SvImJ_T0031844.1 MGP_129S1SvImJ_G0018986.1 mouse_genomes_project 11 97879347 97880951 + Phb protein_coding processed_transcript MGP_129S1SvImJ_T0031845.1 MGP_129S1SvImJ_G0018986.1 mouse_genomes_project 11 97879401 97897055 + MGP_129S1SvImJ_P0031845 Phb protein_coding protein_coding MGP_129S1SvImJ_T0031846.1 MGP_129S1SvImJ_G0018986.1 mouse_genomes_project 11 97883787 97892612 + Phb protein_coding processed_transcript MGP_129S1SvImJ_T0029813.1 MGP_129S1SvImJ_G0018498.1 mouse_genomes_project 11 68289241 68544641 + MGP_129S1SvImJ_P0029813 Stx8 protein_coding protein_coding MGP_129S1SvImJ_T0029814.1 MGP_129S1SvImJ_G0018498.1 mouse_genomes_project 11 68289517 68310641 + MGP_129S1SvImJ_P0029814 Stx8 protein_coding protein_coding MGP_129S1SvImJ_T0029815.1 MGP_129S1SvImJ_G0018498.1 mouse_genomes_project 11 68289528 68297640 + MGP_129S1SvImJ_P0029815 Stx8 protein_coding protein_coding MGP_129S1SvImJ_T0029816.1 MGP_129S1SvImJ_G0018498.1 mouse_genomes_project 11 68289538 68541599 + Stx8 protein_coding processed_transcript MGP_129S1SvImJ_T0029817.1 MGP_129S1SvImJ_G0018498.1 mouse_genomes_project 11 68289540 68297513 + Stx8 protein_coding processed_transcript MGP_129S1SvImJ_T0029818.1 MGP_129S1SvImJ_G0018498.1 mouse_genomes_project 11 68289554 68296690 + Stx8 protein_coding processed_transcript MGP_129S1SvImJ_T0030351.1 MGP_129S1SvImJ_G0018611.1 mouse_genomes_project 11 71207218 71212863 - MGP_129S1SvImJ_P0030351 Spag7 protein_coding protein_coding MGP_129S1SvImJ_T0030352.1 MGP_129S1SvImJ_G0018611.1 mouse_genomes_project 11 71207450 71212665 - Spag7 protein_coding retained_intron MGP_129S1SvImJ_T0030353.1 MGP_129S1SvImJ_G0018611.1 mouse_genomes_project 11 71207787 71212726 - Spag7 protein_coding retained_intron MGP_129S1SvImJ_T0030354.1 MGP_129S1SvImJ_G0018611.1 mouse_genomes_project 11 71207846 71212737 - MGP_129S1SvImJ_P0030354 Spag7 protein_coding protein_coding MGP_129S1SvImJ_T0100526.1 MGP_129S1SvImJ_G0038593.1 mouse_genomes_project 11 84613920 84614017 + Snord7 snoRNA snoRNA MGP_129S1SvImJ_T0003324.1 MGP_129S1SvImJ_G0003069.1 mouse_genomes_project 11 105096153 105096839 - Gm11586 antisense antisense MGP_129S1SvImJ_T0030870.1 MGP_129S1SvImJ_G0018746.1 mouse_genomes_project 11 78366145 78374183 + MGP_129S1SvImJ_P0030870 Coro6 protein_coding protein_coding MGP_129S1SvImJ_T0030871.1 MGP_129S1SvImJ_G0018746.1 mouse_genomes_project 11 78366379 78367687 + MGP_129S1SvImJ_P0030871 Coro6 protein_coding protein_coding MGP_129S1SvImJ_T0030872.1 MGP_129S1SvImJ_G0018746.1 mouse_genomes_project 11 78367568 78373322 + MGP_129S1SvImJ_P0030872 Coro6 protein_coding protein_coding MGP_129S1SvImJ_T0030873.1 MGP_129S1SvImJ_G0018746.1 mouse_genomes_project 11 78367568 78373322 + MGP_129S1SvImJ_P0030873 Coro6 protein_coding protein_coding MGP_129S1SvImJ_T0030874.1 MGP_129S1SvImJ_G0018746.1 mouse_genomes_project 11 78367643 78373222 + MGP_129S1SvImJ_P0030874 Coro6 protein_coding protein_coding MGP_129S1SvImJ_T0030875.1 MGP_129S1SvImJ_G0018746.1 mouse_genomes_project 11 78367643 78373222 + MGP_129S1SvImJ_P0030875 Coro6 protein_coding protein_coding MGP_129S1SvImJ_T0011315.1 MGP_129S1SvImJ_G0009431.1 mouse_genomes_project 11 14963423 14963747 + Gm23959 misc_RNA misc_RNA MGP_129S1SvImJ_T0012573.1 MGP_129S1SvImJ_G0010662.1 mouse_genomes_project 11 31315230 31317202 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099244.1 MGP_129S1SvImJ_G0037311.1 mouse_genomes_project 11 60650393 60650490 + Gm23341 snRNA snRNA MGP_129S1SvImJ_T0030067.1 MGP_129S1SvImJ_G0018554.1 mouse_genomes_project 11 70262014 70275788 - MGP_129S1SvImJ_P0030067 Chrnb1 protein_coding protein_coding MGP_129S1SvImJ_T0030068.1 MGP_129S1SvImJ_G0018554.1 mouse_genomes_project 11 70272548 70274115 - Chrnb1 protein_coding retained_intron MGP_129S1SvImJ_T0030069.1 MGP_129S1SvImJ_G0018554.1 mouse_genomes_project 11 70272623 70273659 - Chrnb1 protein_coding retained_intron MGP_129S1SvImJ_T0030070.1 MGP_129S1SvImJ_G0018554.1 mouse_genomes_project 11 70273358 70275750 - Chrnb1 protein_coding processed_transcript MGP_129S1SvImJ_T0028032.1 MGP_129S1SvImJ_G0018031.1 mouse_genomes_project 11 3997533 3999601 - Gm11983 protein_coding translated_processed_pseudogene MGP_129S1SvImJ_T0028033.1 MGP_129S1SvImJ_G0018031.1 mouse_genomes_project 11 3998754 3999072 - MGP_129S1SvImJ_P0028033 Gm11983 protein_coding protein_coding MGP_129S1SvImJ_T0006378.1 MGP_129S1SvImJ_G0005317.1 mouse_genomes_project 11 118305101 118347517 - 4932435O22Rik lincRNA lincRNA MGP_129S1SvImJ_T0006379.1 MGP_129S1SvImJ_G0005317.1 mouse_genomes_project 11 118305339 118316818 - 4932435O22Rik lincRNA lincRNA MGP_129S1SvImJ_T0017251.1 MGP_129S1SvImJ_G0015189.1 mouse_genomes_project 11 84214982 84222447 - Unc45bos processed_transcript processed_transcript MGP_129S1SvImJ_T0028586.1 MGP_129S1SvImJ_G0018165.1 mouse_genomes_project 11 40579227 40674910 - MGP_129S1SvImJ_P0028586 Gabrg2 protein_coding protein_coding MGP_129S1SvImJ_T0028587.1 MGP_129S1SvImJ_G0018165.1 mouse_genomes_project 11 40580717 40674584 - MGP_129S1SvImJ_P0028587 Gabrg2 protein_coding protein_coding MGP_129S1SvImJ_T0028588.1 MGP_129S1SvImJ_G0018165.1 mouse_genomes_project 11 40580719 40586374 - Gabrg2 protein_coding retained_intron MGP_129S1SvImJ_T0028589.1 MGP_129S1SvImJ_G0018165.1 mouse_genomes_project 11 40584320 40674408 - MGP_129S1SvImJ_P0028589 Gabrg2 protein_coding protein_coding MGP_129S1SvImJ_T0032149.1 MGP_129S1SvImJ_G0019063.1 mouse_genomes_project 11 101110945 101118497 + MGP_129S1SvImJ_P0032149 Zpbp2 protein_coding protein_coding MGP_129S1SvImJ_T0032150.1 MGP_129S1SvImJ_G0019063.1 mouse_genomes_project 11 101110978 101118497 + MGP_129S1SvImJ_P0032150 Zpbp2 protein_coding protein_coding MGP_129S1SvImJ_T0032151.1 MGP_129S1SvImJ_G0019063.1 mouse_genomes_project 11 101110998 101118488 + MGP_129S1SvImJ_P0032151 Zpbp2 protein_coding protein_coding MGP_129S1SvImJ_T0032152.1 MGP_129S1SvImJ_G0019063.1 mouse_genomes_project 11 101111000 101118488 + MGP_129S1SvImJ_P0032152 Zpbp2 protein_coding protein_coding MGP_129S1SvImJ_T0032153.1 MGP_129S1SvImJ_G0019063.1 mouse_genomes_project 11 101111026 101118365 + MGP_129S1SvImJ_P0032153 Zpbp2 protein_coding protein_coding MGP_129S1SvImJ_T0032154.1 MGP_129S1SvImJ_G0019063.1 mouse_genomes_project 11 101115274 101118217 + Zpbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0027972.1 MGP_129S1SvImJ_G0018019.1 mouse_genomes_project 11 3364878 3369384 - MGP_129S1SvImJ_P0027972 Tmed4 protein_coding protein_coding MGP_129S1SvImJ_T0027973.1 MGP_129S1SvImJ_G0018019.1 mouse_genomes_project 11 3366170 3369384 - Tmed4 protein_coding retained_intron MGP_129S1SvImJ_T0027974.1 MGP_129S1SvImJ_G0018019.1 mouse_genomes_project 11 3368254 3369379 - MGP_129S1SvImJ_P0027974 Tmed4 protein_coding protein_coding MGP_129S1SvImJ_T0098473.1 MGP_129S1SvImJ_G0036558.1 mouse_genomes_project 12 68247097 68247215 + n-R5s61 rRNA rRNA MGP_129S1SvImJ_T0036039.1 MGP_129S1SvImJ_G0020141.1 mouse_genomes_project 12 114169825 114225584 + MGP_129S1SvImJ_P0036039 Klc1 protein_coding protein_coding MGP_129S1SvImJ_T0036040.1 MGP_129S1SvImJ_G0020141.1 mouse_genomes_project 12 114169932 114208612 + MGP_129S1SvImJ_P0036040 Klc1 protein_coding protein_coding MGP_129S1SvImJ_T0036041.1 MGP_129S1SvImJ_G0020141.1 mouse_genomes_project 12 114169989 114225536 + MGP_129S1SvImJ_P0036041 Klc1 protein_coding protein_coding MGP_129S1SvImJ_T0036042.1 MGP_129S1SvImJ_G0020141.1 mouse_genomes_project 12 114184309 114208610 + MGP_129S1SvImJ_P0036042 Klc1 protein_coding protein_coding MGP_129S1SvImJ_T0036043.1 MGP_129S1SvImJ_G0020141.1 mouse_genomes_project 12 114193880 114226653 + MGP_129S1SvImJ_P0036043 Klc1 protein_coding protein_coding MGP_129S1SvImJ_T0036044.1 MGP_129S1SvImJ_G0020141.1 mouse_genomes_project 12 114197180 114199694 + Klc1 protein_coding retained_intron MGP_129S1SvImJ_T0036045.1 MGP_129S1SvImJ_G0020141.1 mouse_genomes_project 12 114201233 114208113 + Klc1 protein_coding processed_transcript MGP_129S1SvImJ_T0036046.1 MGP_129S1SvImJ_G0020141.1 mouse_genomes_project 12 114209066 114225535 + Klc1 protein_coding retained_intron MGP_129S1SvImJ_T0036052.1 MGP_129S1SvImJ_G0020141.1 mouse_genomes_project 12 114224312 114225520 + Klc1 protein_coding retained_intron MGP_129S1SvImJ_T0009850.1 MGP_129S1SvImJ_G0007966.1 mouse_genomes_project 12 111817184 111817273 + Mir3070b miRNA miRNA MGP_129S1SvImJ_T0100611.1 MGP_129S1SvImJ_G0038678.1 mouse_genomes_project 12 111923264 111923339 + Gm25856 snoRNA snoRNA MGP_129S1SvImJ_T0099317.1 MGP_129S1SvImJ_G0037384.1 mouse_genomes_project 12 54998634 54998737 - Gm22296 snRNA snRNA MGP_129S1SvImJ_T0035258.1 MGP_129S1SvImJ_G0019899.1 mouse_genomes_project 12 81811394 82003347 - MGP_129S1SvImJ_P0035258 Gm20498 protein_coding protein_coding MGP_129S1SvImJ_T0035263.1 MGP_129S1SvImJ_G0019899.1 mouse_genomes_project 12 81929208 82003324 - MGP_129S1SvImJ_P0035263 Gm20498 protein_coding protein_coding MGP_129S1SvImJ_T0035270.1 MGP_129S1SvImJ_G0019899.1 mouse_genomes_project 12 81933164 82003319 - MGP_129S1SvImJ_P0035270 Gm20498 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035271.1 MGP_129S1SvImJ_G0019899.1 mouse_genomes_project 12 81933200 82003203 - Gm20498 protein_coding processed_transcript MGP_129S1SvImJ_T0035272.1 MGP_129S1SvImJ_G0019899.1 mouse_genomes_project 12 81933222 82003319 - Gm20498 protein_coding processed_transcript MGP_129S1SvImJ_T0035274.1 MGP_129S1SvImJ_G0019899.1 mouse_genomes_project 12 81940072 82003319 - Gm20498 protein_coding processed_transcript MGP_129S1SvImJ_T0035478.1 MGP_129S1SvImJ_G0019960.1 mouse_genomes_project 12 86114788 86151473 - MGP_129S1SvImJ_P0035478 Tmed10 protein_coding protein_coding MGP_129S1SvImJ_T0035291.1 MGP_129S1SvImJ_G0019910.1 mouse_genomes_project 12 83045008 83046295 - MGP_129S1SvImJ_P0035291 Gm5435 protein_coding protein_coding MGP_129S1SvImJ_T0035789.1 MGP_129S1SvImJ_G0020048.1 mouse_genomes_project 12 105086031 105087030 - MGP_129S1SvImJ_P0035789 9330161L09Rik protein_coding protein_coding MGP_129S1SvImJ_T0034489.1 MGP_129S1SvImJ_G0019613.1 mouse_genomes_project 12 14300106 14395162 + MGP_129S1SvImJ_P0034489 Rock2 protein_coding protein_coding MGP_129S1SvImJ_T0099306.1 MGP_129S1SvImJ_G0037373.1 mouse_genomes_project 12 31049533 31049634 - Gm24922 snRNA snRNA MGP_129S1SvImJ_T0034897.1 MGP_129S1SvImJ_G0019768.1 mouse_genomes_project 12 58262793 58269885 + MGP_129S1SvImJ_P0034897 Pnn protein_coding protein_coding MGP_129S1SvImJ_T0034587.1 MGP_129S1SvImJ_G0019647.1 mouse_genomes_project 12 26594129 26714066 + MGP_129S1SvImJ_P0034587 Tssc1 protein_coding protein_coding MGP_129S1SvImJ_T0012822.1 MGP_129S1SvImJ_G0010911.1 mouse_genomes_project 12 60681963 60682936 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012829.1 MGP_129S1SvImJ_G0010918.1 mouse_genomes_project 12 74313955 74318064 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009835.1 MGP_129S1SvImJ_G0007951.1 mouse_genomes_project 12 106863130 106863195 - Mir3069 miRNA miRNA MGP_129S1SvImJ_T0035001.1 MGP_129S1SvImJ_G0019804.1 mouse_genomes_project 12 69689170 69696487 + MGP_129S1SvImJ_P0035001 Gm3086 protein_coding protein_coding MGP_129S1SvImJ_T0035658.1 MGP_129S1SvImJ_G0020009.1 mouse_genomes_project 12 100190646 100309845 - MGP_129S1SvImJ_P0035658 Eml5 protein_coding protein_coding MGP_129S1SvImJ_T0035659.1 MGP_129S1SvImJ_G0020009.1 mouse_genomes_project 12 100204959 100309389 - MGP_129S1SvImJ_P0035659 Eml5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035809.1 MGP_129S1SvImJ_G0020054.1 mouse_genomes_project 12 105310390 105324941 - MGP_129S1SvImJ_P0035809 Serpina10 protein_coding protein_coding MGP_129S1SvImJ_T0035810.1 MGP_129S1SvImJ_G0020054.1 mouse_genomes_project 12 105312195 105324918 - MGP_129S1SvImJ_P0035810 Serpina10 protein_coding protein_coding MGP_129S1SvImJ_T0102178.1 MGP_129S1SvImJ_G0040012.1 mouse_genomes_project 12 105836764 105842804 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0009905.1 MGP_129S1SvImJ_G0008021.1 mouse_genomes_project 12 111987352 111987433 + Mir410 miRNA miRNA MGP_129S1SvImJ_T0036028.1 MGP_129S1SvImJ_G0020138.1 mouse_genomes_project 12 114079690 114085485 + MGP_129S1SvImJ_P0036028 Trmt61a protein_coding protein_coding MGP_129S1SvImJ_T0036029.1 MGP_129S1SvImJ_G0020138.1 mouse_genomes_project 12 114079690 114085485 + MGP_129S1SvImJ_P0036029 Trmt61a protein_coding protein_coding MGP_129S1SvImJ_T0035429.1 MGP_129S1SvImJ_G0019946.1 mouse_genomes_project 12 85523483 85621849 - MGP_129S1SvImJ_P0035429 Ltbp2 protein_coding protein_coding MGP_129S1SvImJ_T0035430.1 MGP_129S1SvImJ_G0019946.1 mouse_genomes_project 12 85523484 85621812 - MGP_129S1SvImJ_P0035430 Ltbp2 protein_coding protein_coding MGP_129S1SvImJ_T0035431.1 MGP_129S1SvImJ_G0019946.1 mouse_genomes_project 12 85523600 85621796 - MGP_129S1SvImJ_P0035431 Ltbp2 protein_coding protein_coding MGP_129S1SvImJ_T0035432.1 MGP_129S1SvImJ_G0019946.1 mouse_genomes_project 12 85525477 85532119 - MGP_129S1SvImJ_P0035432 Ltbp2 protein_coding protein_coding MGP_129S1SvImJ_T0035433.1 MGP_129S1SvImJ_G0019946.1 mouse_genomes_project 12 85526650 85533247 - MGP_129S1SvImJ_P0035433 Ltbp2 protein_coding protein_coding MGP_129S1SvImJ_T0035434.1 MGP_129S1SvImJ_G0019946.1 mouse_genomes_project 12 85532134 85539739 - MGP_129S1SvImJ_P0035434 Ltbp2 protein_coding protein_coding MGP_129S1SvImJ_T0035435.1 MGP_129S1SvImJ_G0019946.1 mouse_genomes_project 12 85547988 85621808 - Ltbp2 protein_coding retained_intron MGP_129S1SvImJ_T0100580.1 MGP_129S1SvImJ_G0038647.1 mouse_genomes_project 12 73030994 73031126 - Gm23910 snoRNA snoRNA MGP_129S1SvImJ_T0035003.1 MGP_129S1SvImJ_G0019806.1 mouse_genomes_project 12 69737968 69831945 - MGP_129S1SvImJ_P0035003 Nin protein_coding protein_coding MGP_129S1SvImJ_T0035004.1 MGP_129S1SvImJ_G0019806.1 mouse_genomes_project 12 69745271 69831966 - MGP_129S1SvImJ_P0035004 Nin protein_coding protein_coding MGP_129S1SvImJ_T0035005.1 MGP_129S1SvImJ_G0019806.1 mouse_genomes_project 12 69745272 69841024 - MGP_129S1SvImJ_P0035005 Nin protein_coding protein_coding MGP_129S1SvImJ_T0035006.1 MGP_129S1SvImJ_G0019806.1 mouse_genomes_project 12 69745292 69841019 - MGP_129S1SvImJ_P0035006 Nin protein_coding protein_coding MGP_129S1SvImJ_T0034415.1 MGP_129S1SvImJ_G0019585.1 mouse_genomes_project 12 5547757 5549980 - MGP_129S1SvImJ_P0034415 Rhob protein_coding protein_coding MGP_129S1SvImJ_T0012828.1 MGP_129S1SvImJ_G0010917.1 mouse_genomes_project 12 73907392 73907698 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009917.1 MGP_129S1SvImJ_G0008033.1 mouse_genomes_project 12 115983291 115983345 - Gm24022 miRNA miRNA MGP_129S1SvImJ_T0100600.1 MGP_129S1SvImJ_G0038667.1 mouse_genomes_project 12 111885470 111885543 + DQ267101 snoRNA snoRNA MGP_129S1SvImJ_T0000894.1 MGP_129S1SvImJ_G0000827.1 mouse_genomes_project 12 111909172 111917863 + TEC TEC MGP_129S1SvImJ_T0035819.1 MGP_129S1SvImJ_G0020059.1 mouse_genomes_project 12 105685364 105696125 - MGP_129S1SvImJ_P0035819 protein_coding protein_coding MGP_129S1SvImJ_T0035541.1 MGP_129S1SvImJ_G0019976.1 mouse_genomes_project 12 87902751 87981793 + MGP_129S1SvImJ_P0035541 Tmem63c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035542.1 MGP_129S1SvImJ_G0019976.1 mouse_genomes_project 12 87907647 87981788 + MGP_129S1SvImJ_P0035542 Tmem63c protein_coding protein_coding MGP_129S1SvImJ_T0035543.1 MGP_129S1SvImJ_G0019976.1 mouse_genomes_project 12 87907919 87981783 + MGP_129S1SvImJ_P0035543 Tmem63c protein_coding protein_coding MGP_129S1SvImJ_T0035544.1 MGP_129S1SvImJ_G0019976.1 mouse_genomes_project 12 87907971 87944344 + MGP_129S1SvImJ_P0035544 Tmem63c protein_coding protein_coding MGP_129S1SvImJ_T0035545.1 MGP_129S1SvImJ_G0019976.1 mouse_genomes_project 12 87921548 87981791 + MGP_129S1SvImJ_P0035545 Tmem63c protein_coding protein_coding MGP_129S1SvImJ_T0012838.1 MGP_129S1SvImJ_G0010927.1 mouse_genomes_project 12 84273036 84273424 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0035087.1 MGP_129S1SvImJ_G0019831.1 mouse_genomes_project 12 72807170 72812182 + MGP_129S1SvImJ_P0035087 Six6 protein_coding protein_coding MGP_129S1SvImJ_T0034615.1 MGP_129S1SvImJ_G0019657.1 mouse_genomes_project 12 29113696 29114251 + MGP_129S1SvImJ_P0034615 6030469F06Rik protein_coding protein_coding MGP_129S1SvImJ_T0012835.1 MGP_129S1SvImJ_G0010924.1 mouse_genomes_project 12 81859126 81859438 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034768.1 MGP_129S1SvImJ_G0019710.1 mouse_genomes_project 12 42773070 42777242 - MGP_129S1SvImJ_P0034768 Dnajb9 protein_coding protein_coding MGP_129S1SvImJ_T0100581.1 MGP_129S1SvImJ_G0038648.1 mouse_genomes_project 12 78031304 78031434 - Gm24070 snoRNA snoRNA MGP_129S1SvImJ_T0035461.1 MGP_129S1SvImJ_G0019953.1 mouse_genomes_project 12 85894556 85910241 - MGP_129S1SvImJ_P0035461 Rps6kl1 protein_coding protein_coding MGP_129S1SvImJ_T0009842.1 MGP_129S1SvImJ_G0007958.1 mouse_genomes_project 12 111792292 111792386 + Mir770 miRNA miRNA MGP_129S1SvImJ_T0035100.1 MGP_129S1SvImJ_G0019836.1 mouse_genomes_project 12 73182204 73250156 + MGP_129S1SvImJ_P0035100 Slc38a6 protein_coding protein_coding MGP_129S1SvImJ_T0035101.1 MGP_129S1SvImJ_G0019836.1 mouse_genomes_project 12 73182215 73210222 + MGP_129S1SvImJ_P0035101 Slc38a6 protein_coding protein_coding MGP_129S1SvImJ_T0035102.1 MGP_129S1SvImJ_G0019836.1 mouse_genomes_project 12 73182333 73210211 + MGP_129S1SvImJ_P0035102 Slc38a6 protein_coding protein_coding MGP_129S1SvImJ_T0035103.1 MGP_129S1SvImJ_G0019836.1 mouse_genomes_project 12 73209834 73235213 + Slc38a6 protein_coding retained_intron MGP_129S1SvImJ_T0035104.1 MGP_129S1SvImJ_G0019836.1 mouse_genomes_project 12 73239589 73246639 + Slc38a6 protein_coding retained_intron MGP_129S1SvImJ_T0006428.1 MGP_129S1SvImJ_G0005358.1 mouse_genomes_project 12 48114166 48133428 + 3110039M20Rik lincRNA lincRNA MGP_129S1SvImJ_T0006429.1 MGP_129S1SvImJ_G0005358.1 mouse_genomes_project 12 48115173 48133206 + 3110039M20Rik lincRNA lincRNA MGP_129S1SvImJ_T0009811.1 MGP_129S1SvImJ_G0007927.1 mouse_genomes_project 12 69049164 69049244 - miRNA miRNA MGP_129S1SvImJ_T0009910.1 MGP_129S1SvImJ_G0008026.1 mouse_genomes_project 12 114542714 114542774 - Mir3073b miRNA miRNA MGP_129S1SvImJ_T0100593.1 MGP_129S1SvImJ_G0038660.1 mouse_genomes_project 12 111865120 111865195 + Gm24564 snoRNA snoRNA MGP_129S1SvImJ_T0034394.1 MGP_129S1SvImJ_G0019577.1 mouse_genomes_project 12 1782020 1793934 - Mfsd2b protein_coding retained_intron MGP_129S1SvImJ_T0034395.1 MGP_129S1SvImJ_G0019577.1 mouse_genomes_project 12 1782020 1793937 - MGP_129S1SvImJ_P0034395 Mfsd2b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034396.1 MGP_129S1SvImJ_G0019577.1 mouse_genomes_project 12 1782652 1793924 - Mfsd2b protein_coding retained_intron MGP_129S1SvImJ_T0034397.1 MGP_129S1SvImJ_G0019577.1 mouse_genomes_project 12 1782652 1793937 - MGP_129S1SvImJ_P0034397 Mfsd2b protein_coding protein_coding MGP_129S1SvImJ_T0034398.1 MGP_129S1SvImJ_G0019577.1 mouse_genomes_project 12 1782652 1793937 - MGP_129S1SvImJ_P0034398 Mfsd2b protein_coding protein_coding MGP_129S1SvImJ_T0034399.1 MGP_129S1SvImJ_G0019577.1 mouse_genomes_project 12 1783145 1793938 - Mfsd2b protein_coding retained_intron MGP_129S1SvImJ_T0034400.1 MGP_129S1SvImJ_G0019577.1 mouse_genomes_project 12 1786814 1788840 - Mfsd2b protein_coding retained_intron MGP_129S1SvImJ_T0034401.1 MGP_129S1SvImJ_G0019577.1 mouse_genomes_project 12 1788526 1793938 - MGP_129S1SvImJ_P0034401 Mfsd2b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034581.1 MGP_129S1SvImJ_G0019645.1 mouse_genomes_project 12 26512784 26521105 + MGP_129S1SvImJ_P0034581 Adi1 protein_coding protein_coding MGP_129S1SvImJ_T0034582.1 MGP_129S1SvImJ_G0019645.1 mouse_genomes_project 12 26513043 26519287 + MGP_129S1SvImJ_P0034582 Adi1 protein_coding protein_coding MGP_129S1SvImJ_T0034583.1 MGP_129S1SvImJ_G0019645.1 mouse_genomes_project 12 26515381 26517302 + Adi1 protein_coding processed_transcript MGP_129S1SvImJ_T0101618.1 MGP_129S1SvImJ_G0039662.1 mouse_genomes_project 12 102645951 102649616 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101619.1 MGP_129S1SvImJ_G0039662.1 mouse_genomes_project 12 102649444 102650096 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0100599.1 MGP_129S1SvImJ_G0038666.1 mouse_genomes_project 12 111883663 111883735 + DQ267100 snoRNA snoRNA MGP_129S1SvImJ_T0006464.1 MGP_129S1SvImJ_G0005389.1 mouse_genomes_project 12 102433382 102441515 + A630072L19Rik lincRNA lincRNA MGP_129S1SvImJ_T0034743.1 MGP_129S1SvImJ_G0019701.1 mouse_genomes_project 12 38590366 38611891 - MGP_129S1SvImJ_P0034743 Lsmem1 protein_coding protein_coding MGP_129S1SvImJ_T0000075.1 MGP_129S1SvImJ_G0000060.1 mouse_genomes_project 12 116818673 116818969 - MGP_129S1SvImJ_P0000075 Ighv3-3 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000076.1 MGP_129S1SvImJ_G0000060.1 mouse_genomes_project 12 116818673 116819107 - MGP_129S1SvImJ_P0000076 Ighv3-3 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0035106.1 MGP_129S1SvImJ_G0019838.1 mouse_genomes_project 12 73451716 73454998 - MGP_129S1SvImJ_P0035106 Tmem30b protein_coding protein_coding MGP_129S1SvImJ_T0006415.1 MGP_129S1SvImJ_G0005349.1 mouse_genomes_project 12 24904783 24924302 - Gm9866 lincRNA lincRNA MGP_129S1SvImJ_T0006416.1 MGP_129S1SvImJ_G0005349.1 mouse_genomes_project 12 24904789 24924624 - Gm9866 lincRNA lincRNA MGP_129S1SvImJ_T0006417.1 MGP_129S1SvImJ_G0005349.1 mouse_genomes_project 12 24905873 24924437 - Gm9866 lincRNA lincRNA MGP_129S1SvImJ_T0006418.1 MGP_129S1SvImJ_G0005349.1 mouse_genomes_project 12 24909392 24924453 - Gm9866 lincRNA lincRNA MGP_129S1SvImJ_T0034895.1 MGP_129S1SvImJ_G0019767.1 mouse_genomes_project 12 58234042 58256520 - MGP_129S1SvImJ_P0034895 Trappc6b protein_coding protein_coding MGP_129S1SvImJ_T0034896.1 MGP_129S1SvImJ_G0019767.1 mouse_genomes_project 12 58235946 58256295 - MGP_129S1SvImJ_P0034896 Trappc6b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035837.1 MGP_129S1SvImJ_G0020070.1 mouse_genomes_project 12 105973292 105981894 + MGP_129S1SvImJ_P0035837 Serpina3f protein_coding protein_coding MGP_129S1SvImJ_T0035838.1 MGP_129S1SvImJ_G0020070.1 mouse_genomes_project 12 105973292 105981888 + MGP_129S1SvImJ_P0035838 Serpina3f protein_coding protein_coding MGP_129S1SvImJ_T0035839.1 MGP_129S1SvImJ_G0020070.1 mouse_genomes_project 12 105973381 105981888 + MGP_129S1SvImJ_P0035839 Serpina3f protein_coding protein_coding MGP_129S1SvImJ_T0100570.1 MGP_129S1SvImJ_G0038637.1 mouse_genomes_project 12 55671701 55671833 + Gm25760 snoRNA snoRNA MGP_129S1SvImJ_T0000882.1 MGP_129S1SvImJ_G0000815.1 mouse_genomes_project 12 55730831 55731695 - TEC TEC MGP_129S1SvImJ_T0035151.1 MGP_129S1SvImJ_G0019854.1 mouse_genomes_project 12 76349142 76418724 + MGP_129S1SvImJ_P0035151 Mthfd1 protein_coding protein_coding MGP_129S1SvImJ_T0006501.1 MGP_129S1SvImJ_G0005411.1 mouse_genomes_project 12 111874387 111876398 + Gm26945 lincRNA lincRNA MGP_129S1SvImJ_T0000111.1 MGP_129S1SvImJ_G0000084.1 mouse_genomes_project 12 117891433 118420389 - MGP_129S1SvImJ_P0000111 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0034385.1 MGP_129S1SvImJ_G0019570.1 mouse_genomes_project 12 1588159 1588684 - MGP_129S1SvImJ_P0034385 Gm17541 protein_coding protein_coding MGP_129S1SvImJ_T0100588.1 MGP_129S1SvImJ_G0038655.1 mouse_genomes_project 12 92682344 92682487 - Gm25776 snoRNA snoRNA MGP_129S1SvImJ_T0035858.1 MGP_129S1SvImJ_G0020084.1 mouse_genomes_project 12 106991728 107012532 + MGP_129S1SvImJ_P0035858 Tcl1b2 protein_coding protein_coding MGP_129S1SvImJ_T0035859.1 MGP_129S1SvImJ_G0020084.1 mouse_genomes_project 12 106992747 107012751 + MGP_129S1SvImJ_P0035859 Tcl1b2 protein_coding protein_coding MGP_129S1SvImJ_T0035357.1 MGP_129S1SvImJ_G0019920.1 mouse_genomes_project 12 84617259 84617925 - MGP_129S1SvImJ_P0035357 Gm26571 protein_coding protein_coding MGP_129S1SvImJ_T0035582.1 MGP_129S1SvImJ_G0019988.1 mouse_genomes_project 12 88361461 88367462 + MGP_129S1SvImJ_P0035582 Slirp protein_coding protein_coding MGP_129S1SvImJ_T0035583.1 MGP_129S1SvImJ_G0019988.1 mouse_genomes_project 12 88361479 88367466 + MGP_129S1SvImJ_P0035583 Slirp protein_coding protein_coding MGP_129S1SvImJ_T0035584.1 MGP_129S1SvImJ_G0019988.1 mouse_genomes_project 12 88361485 88367446 + MGP_129S1SvImJ_P0035584 Slirp protein_coding protein_coding MGP_129S1SvImJ_T0035784.1 MGP_129S1SvImJ_G0020047.1 mouse_genomes_project 12 105068071 105085552 + MGP_129S1SvImJ_P0035784 Otub2 protein_coding protein_coding MGP_129S1SvImJ_T0035785.1 MGP_129S1SvImJ_G0020047.1 mouse_genomes_project 12 105068087 105085558 + MGP_129S1SvImJ_P0035785 Otub2 protein_coding protein_coding MGP_129S1SvImJ_T0035786.1 MGP_129S1SvImJ_G0020047.1 mouse_genomes_project 12 105068155 105085558 + Otub2 protein_coding retained_intron MGP_129S1SvImJ_T0035787.1 MGP_129S1SvImJ_G0020047.1 mouse_genomes_project 12 105068374 105082114 + MGP_129S1SvImJ_P0035787 Otub2 protein_coding protein_coding MGP_129S1SvImJ_T0035788.1 MGP_129S1SvImJ_G0020047.1 mouse_genomes_project 12 105072043 105085563 + MGP_129S1SvImJ_P0035788 Otub2 protein_coding protein_coding MGP_129S1SvImJ_T0035688.1 MGP_129S1SvImJ_G0020016.1 mouse_genomes_project 12 101586280 101622162 - MGP_129S1SvImJ_P0035688 Nrde2 protein_coding protein_coding MGP_129S1SvImJ_T0035761.1 MGP_129S1SvImJ_G0020042.1 mouse_genomes_project 12 104554313 104555538 + MGP_129S1SvImJ_P0035761 Cox8c protein_coding protein_coding MGP_129S1SvImJ_T0035801.1 MGP_129S1SvImJ_G0020051.1 mouse_genomes_project 12 105121621 105123135 - MGP_129S1SvImJ_P0035801 Ifi27l2a protein_coding protein_coding MGP_129S1SvImJ_T0034402.1 MGP_129S1SvImJ_G0019578.1 mouse_genomes_project 12 1799656 1829725 - MGP_129S1SvImJ_P0034402 Ubxn2a protein_coding protein_coding MGP_129S1SvImJ_T0034403.1 MGP_129S1SvImJ_G0019578.1 mouse_genomes_project 12 1799973 1829284 - MGP_129S1SvImJ_P0034403 Ubxn2a protein_coding protein_coding MGP_129S1SvImJ_T0034404.1 MGP_129S1SvImJ_G0019578.1 mouse_genomes_project 12 1801014 1829459 - MGP_129S1SvImJ_P0034404 Ubxn2a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034501.1 MGP_129S1SvImJ_G0019617.1 mouse_genomes_project 12 14692925 14708208 + Pdia6 protein_coding retained_intron MGP_129S1SvImJ_T0034502.1 MGP_129S1SvImJ_G0019617.1 mouse_genomes_project 12 14692925 14711186 + MGP_129S1SvImJ_P0034502 Pdia6 protein_coding protein_coding MGP_129S1SvImJ_T0034503.1 MGP_129S1SvImJ_G0019617.1 mouse_genomes_project 12 14692988 14700608 + Pdia6 protein_coding processed_transcript MGP_129S1SvImJ_T0034504.1 MGP_129S1SvImJ_G0019617.1 mouse_genomes_project 12 14700237 14704031 + Pdia6 protein_coding retained_intron MGP_129S1SvImJ_T0034505.1 MGP_129S1SvImJ_G0019617.1 mouse_genomes_project 12 14703621 14705320 + Pdia6 protein_coding processed_transcript MGP_129S1SvImJ_T0034638.1 MGP_129S1SvImJ_G0019663.1 mouse_genomes_project 12 29560345 29600253 - MGP_129S1SvImJ_P0034638 Bcap29 protein_coding protein_coding MGP_129S1SvImJ_T0034639.1 MGP_129S1SvImJ_G0019663.1 mouse_genomes_project 12 29560345 29600192 - MGP_129S1SvImJ_P0034639 Bcap29 protein_coding protein_coding MGP_129S1SvImJ_T0034932.1 MGP_129S1SvImJ_G0019775.1 mouse_genomes_project 12 64383270 64389938 + MGP_129S1SvImJ_P0034932 Gm527 protein_coding protein_coding MGP_129S1SvImJ_T0006413.1 MGP_129S1SvImJ_G0005347.1 mouse_genomes_project 12 13163305 13240857 + Gm5432 lincRNA lincRNA MGP_129S1SvImJ_T0034623.1 MGP_129S1SvImJ_G0019659.1 mouse_genomes_project 12 29266862 29287659 - MGP_129S1SvImJ_P0034623 Dld protein_coding protein_coding MGP_129S1SvImJ_T0099321.1 MGP_129S1SvImJ_G0037388.1 mouse_genomes_project 12 63055573 63055680 + Gm24921 snRNA snRNA MGP_129S1SvImJ_T0035828.1 MGP_129S1SvImJ_G0020064.1 mouse_genomes_project 12 105743336 105763829 - MGP_129S1SvImJ_P0035828 Serpina9 protein_coding protein_coding MGP_129S1SvImJ_T0035829.1 MGP_129S1SvImJ_G0020064.1 mouse_genomes_project 12 105757071 105763932 - MGP_129S1SvImJ_P0035829 Serpina9 protein_coding protein_coding MGP_129S1SvImJ_T0009886.1 MGP_129S1SvImJ_G0008002.1 mouse_genomes_project 12 111970467 111970542 + Mir381 miRNA miRNA MGP_129S1SvImJ_T0035849.1 MGP_129S1SvImJ_G0020076.1 mouse_genomes_project 12 106202007 106209632 + MGP_129S1SvImJ_P0035849 Serpina3n protein_coding protein_coding MGP_129S1SvImJ_T0034887.1 MGP_129S1SvImJ_G0019765.1 mouse_genomes_project 12 58150135 58205859 - MGP_129S1SvImJ_P0034887 Sec23a protein_coding protein_coding MGP_129S1SvImJ_T0034888.1 MGP_129S1SvImJ_G0019765.1 mouse_genomes_project 12 58151456 58201077 - MGP_129S1SvImJ_P0034888 Sec23a protein_coding protein_coding MGP_129S1SvImJ_T0034889.1 MGP_129S1SvImJ_G0019765.1 mouse_genomes_project 12 58158845 58164861 - Sec23a protein_coding retained_intron MGP_129S1SvImJ_T0034890.1 MGP_129S1SvImJ_G0019765.1 mouse_genomes_project 12 58166577 58176075 - Sec23a protein_coding retained_intron MGP_129S1SvImJ_T0034891.1 MGP_129S1SvImJ_G0019765.1 mouse_genomes_project 12 58200495 58205859 - Sec23a protein_coding retained_intron MGP_129S1SvImJ_T0035237.1 MGP_129S1SvImJ_G0019895.1 mouse_genomes_project 12 81365522 81374026 + MGP_129S1SvImJ_P0035237 Srsf5 protein_coding protein_coding MGP_129S1SvImJ_T0035238.1 MGP_129S1SvImJ_G0019895.1 mouse_genomes_project 12 81365538 81374022 + Srsf5 protein_coding retained_intron MGP_129S1SvImJ_T0035239.1 MGP_129S1SvImJ_G0019895.1 mouse_genomes_project 12 81365538 81374022 + MGP_129S1SvImJ_P0035239 Srsf5 protein_coding protein_coding MGP_129S1SvImJ_T0035240.1 MGP_129S1SvImJ_G0019895.1 mouse_genomes_project 12 81365550 81374022 + Srsf5 protein_coding retained_intron MGP_129S1SvImJ_T0035241.1 MGP_129S1SvImJ_G0019895.1 mouse_genomes_project 12 81365550 81374022 + MGP_129S1SvImJ_P0035241 Srsf5 protein_coding protein_coding MGP_129S1SvImJ_T0035242.1 MGP_129S1SvImJ_G0019895.1 mouse_genomes_project 12 81365550 81374022 + MGP_129S1SvImJ_P0035242 Srsf5 protein_coding protein_coding MGP_129S1SvImJ_T0035243.1 MGP_129S1SvImJ_G0019895.1 mouse_genomes_project 12 81365552 81366867 + Srsf5 protein_coding processed_transcript MGP_129S1SvImJ_T0035244.1 MGP_129S1SvImJ_G0019895.1 mouse_genomes_project 12 81365566 81368535 + Srsf5 protein_coding processed_transcript MGP_129S1SvImJ_T0035245.1 MGP_129S1SvImJ_G0019895.1 mouse_genomes_project 12 81365588 81367559 + MGP_129S1SvImJ_P0035245 Srsf5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035246.1 MGP_129S1SvImJ_G0019895.1 mouse_genomes_project 12 81365597 81366990 + Srsf5 protein_coding processed_transcript MGP_129S1SvImJ_T0035247.1 MGP_129S1SvImJ_G0019895.1 mouse_genomes_project 12 81365603 81374022 + MGP_129S1SvImJ_P0035247 Srsf5 protein_coding protein_coding MGP_129S1SvImJ_T0035248.1 MGP_129S1SvImJ_G0019895.1 mouse_genomes_project 12 81366394 81374016 + Srsf5 protein_coding retained_intron MGP_129S1SvImJ_T0006459.1 MGP_129S1SvImJ_G0005384.1 mouse_genomes_project 12 91883829 92100267 - 4930544I03Rik lincRNA lincRNA MGP_129S1SvImJ_T0034990.1 MGP_129S1SvImJ_G0019802.1 mouse_genomes_project 12 69517030 69609245 - Map4k5 protein_coding processed_transcript MGP_129S1SvImJ_T0034991.1 MGP_129S1SvImJ_G0019802.1 mouse_genomes_project 12 69517030 69609151 - MGP_129S1SvImJ_P0034991 Map4k5 protein_coding protein_coding MGP_129S1SvImJ_T0034992.1 MGP_129S1SvImJ_G0019802.1 mouse_genomes_project 12 69517030 69609342 - MGP_129S1SvImJ_P0034992 Map4k5 protein_coding protein_coding MGP_129S1SvImJ_T0034993.1 MGP_129S1SvImJ_G0019802.1 mouse_genomes_project 12 69517039 69609305 - MGP_129S1SvImJ_P0034993 Map4k5 protein_coding protein_coding MGP_129S1SvImJ_T0034994.1 MGP_129S1SvImJ_G0019802.1 mouse_genomes_project 12 69517039 69609245 - MGP_129S1SvImJ_P0034994 Map4k5 protein_coding protein_coding MGP_129S1SvImJ_T0034995.1 MGP_129S1SvImJ_G0019802.1 mouse_genomes_project 12 69517041 69532706 - Map4k5 protein_coding retained_intron MGP_129S1SvImJ_T0034996.1 MGP_129S1SvImJ_G0019802.1 mouse_genomes_project 12 69532034 69533111 - Map4k5 protein_coding processed_transcript MGP_129S1SvImJ_T0034997.1 MGP_129S1SvImJ_G0019802.1 mouse_genomes_project 12 69559157 69590587 - Map4k5 protein_coding retained_intron MGP_129S1SvImJ_T0034998.1 MGP_129S1SvImJ_G0019802.1 mouse_genomes_project 12 69563788 69609265 - Map4k5 protein_coding retained_intron MGP_129S1SvImJ_T0034999.1 MGP_129S1SvImJ_G0019802.1 mouse_genomes_project 12 69564258 69572630 - Map4k5 protein_coding retained_intron MGP_129S1SvImJ_T0034899.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58298610 58393486 + MGP_129S1SvImJ_P0034899 Ctage5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034900.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58333554 58393481 + MGP_129S1SvImJ_P0034900 Ctage5 protein_coding protein_coding MGP_129S1SvImJ_T0034901.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58333580 58393478 + MGP_129S1SvImJ_P0034901 Ctage5 protein_coding protein_coding MGP_129S1SvImJ_T0034902.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58333597 58393481 + MGP_129S1SvImJ_P0034902 Ctage5 protein_coding protein_coding MGP_129S1SvImJ_T0034903.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58333599 58353150 + MGP_129S1SvImJ_P0034903 Ctage5 protein_coding protein_coding MGP_129S1SvImJ_T0034904.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58333619 58393527 + MGP_129S1SvImJ_P0034904 Ctage5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034905.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58333644 58372565 + MGP_129S1SvImJ_P0034905 Ctage5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034906.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58334211 58393255 + MGP_129S1SvImJ_P0034906 Ctage5 protein_coding protein_coding MGP_129S1SvImJ_T0034907.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58334671 58393527 + MGP_129S1SvImJ_P0034907 Ctage5 protein_coding protein_coding MGP_129S1SvImJ_T0034908.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58334856 58350487 + MGP_129S1SvImJ_P0034908 Ctage5 protein_coding protein_coding MGP_129S1SvImJ_T0034909.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58335120 58394905 + MGP_129S1SvImJ_P0034909 Ctage5 protein_coding protein_coding MGP_129S1SvImJ_T0034910.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58335287 58393478 + MGP_129S1SvImJ_P0034910 Ctage5 protein_coding protein_coding MGP_129S1SvImJ_T0034911.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58335301 58393257 + MGP_129S1SvImJ_P0034911 Ctage5 protein_coding protein_coding MGP_129S1SvImJ_T0034912.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58335315 58348590 + Ctage5 protein_coding retained_intron MGP_129S1SvImJ_T0034913.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58335336 58393527 + MGP_129S1SvImJ_P0034913 Ctage5 protein_coding protein_coding MGP_129S1SvImJ_T0034914.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58339942 58393257 + MGP_129S1SvImJ_P0034914 Ctage5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034915.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58353122 58393257 + MGP_129S1SvImJ_P0034915 Ctage5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034916.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58366509 58387617 + MGP_129S1SvImJ_P0034916 Ctage5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034917.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58370409 58378944 + Ctage5 protein_coding retained_intron MGP_129S1SvImJ_T0034918.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58372478 58392945 + Ctage5 protein_coding retained_intron MGP_129S1SvImJ_T0034919.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58372607 58374673 + Ctage5 protein_coding retained_intron MGP_129S1SvImJ_T0034920.1 MGP_129S1SvImJ_G0019770.1 mouse_genomes_project 12 58382832 58391824 + Ctage5 protein_coding retained_intron MGP_129S1SvImJ_T0012854.1 MGP_129S1SvImJ_G0010943.1 mouse_genomes_project 12 108439064 108439410 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099307.1 MGP_129S1SvImJ_G0037374.1 mouse_genomes_project 12 33643318 33643425 + Gm26071 snRNA snRNA MGP_129S1SvImJ_T0100572.1 MGP_129S1SvImJ_G0038639.1 mouse_genomes_project 12 58872903 58873034 - Gm24377 snoRNA snoRNA MGP_129S1SvImJ_T0034463.1 MGP_129S1SvImJ_G0019603.1 mouse_genomes_project 12 10142527 10142911 + MGP_129S1SvImJ_P0034463 Rpl36-ps3 protein_coding protein_coding MGP_129S1SvImJ_T0012834.1 MGP_129S1SvImJ_G0010923.1 mouse_genomes_project 12 80448606 80449501 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034467.1 MGP_129S1SvImJ_G0019605.1 mouse_genomes_project 12 10477911 10507011 - MGP_129S1SvImJ_P0034467 Ddx1 protein_coding protein_coding MGP_129S1SvImJ_T0034540.1 MGP_129S1SvImJ_G0019627.1 mouse_genomes_project 12 22137528 22137979 - MGP_129S1SvImJ_P0034540 Gm16372 protein_coding protein_coding MGP_129S1SvImJ_T0003436.1 MGP_129S1SvImJ_G0003154.1 mouse_genomes_project 12 92179358 92204093 + 5430427M07Rik antisense antisense MGP_129S1SvImJ_T0100559.1 MGP_129S1SvImJ_G0038626.1 mouse_genomes_project 12 33034783 33034915 + Gm24429 snoRNA snoRNA MGP_129S1SvImJ_T0034959.1 MGP_129S1SvImJ_G0019786.1 mouse_genomes_project 12 68830961 68841428 + MGP_129S1SvImJ_P0034959 Lrr1 protein_coding protein_coding MGP_129S1SvImJ_T0035217.1 MGP_129S1SvImJ_G0019883.1 mouse_genomes_project 12 79517985 79585922 - MGP_129S1SvImJ_P0035217 Zfyve26 protein_coding protein_coding MGP_129S1SvImJ_T0100604.1 MGP_129S1SvImJ_G0038671.1 mouse_genomes_project 12 111891171 111891243 + Gm25357 snoRNA snoRNA MGP_129S1SvImJ_T0034685.1 MGP_129S1SvImJ_G0019676.1 mouse_genomes_project 12 31493587 31503386 + MGP_129S1SvImJ_P0034685 Twistnb protein_coding protein_coding MGP_129S1SvImJ_T0034383.1 MGP_129S1SvImJ_G0019569.1 mouse_genomes_project 12 1488533 1612178 + MGP_129S1SvImJ_P0034383 Itsn2 protein_coding protein_coding MGP_129S1SvImJ_T0034384.1 MGP_129S1SvImJ_G0019569.1 mouse_genomes_project 12 1508747 1574984 + MGP_129S1SvImJ_P0034384 Itsn2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0012864.1 MGP_129S1SvImJ_G0010953.1 mouse_genomes_project 12 115954653 115955010 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036175.1 MGP_129S1SvImJ_G0020189.1 mouse_genomes_project 12 121868263 121967630 - MGP_129S1SvImJ_P0036175 Abcb5 protein_coding protein_coding MGP_129S1SvImJ_T0036176.1 MGP_129S1SvImJ_G0020189.1 mouse_genomes_project 12 121886507 121891127 - Abcb5 protein_coding retained_intron MGP_129S1SvImJ_T0036177.1 MGP_129S1SvImJ_G0020189.1 mouse_genomes_project 12 121886980 121928229 - Abcb5 protein_coding processed_transcript MGP_129S1SvImJ_T0012861.1 MGP_129S1SvImJ_G0010950.1 mouse_genomes_project 12 110561887 110562628 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011344.1 MGP_129S1SvImJ_G0009460.1 mouse_genomes_project 12 45502328 45502577 - Gm25051 misc_RNA misc_RNA MGP_129S1SvImJ_T0012813.1 MGP_129S1SvImJ_G0010902.1 mouse_genomes_project 12 50556541 50556852 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034862.1 MGP_129S1SvImJ_G0019757.1 mouse_genomes_project 12 55820043 55841991 + MGP_129S1SvImJ_P0034862 Pax9 protein_coding protein_coding MGP_129S1SvImJ_T0034863.1 MGP_129S1SvImJ_G0019757.1 mouse_genomes_project 12 55823909 55842106 + MGP_129S1SvImJ_P0034863 Pax9 protein_coding protein_coding MGP_129S1SvImJ_T0034864.1 MGP_129S1SvImJ_G0019757.1 mouse_genomes_project 12 55823999 55839804 + Pax9 protein_coding retained_intron MGP_129S1SvImJ_T0034833.1 MGP_129S1SvImJ_G0019741.1 mouse_genomes_project 12 53942973 53943345 - MGP_129S1SvImJ_P0034833 Gm20403 protein_coding protein_coding MGP_129S1SvImJ_T0034577.1 MGP_129S1SvImJ_G0019642.1 mouse_genomes_project 12 26425181 26456006 - MGP_129S1SvImJ_P0034577 Colec11 protein_coding protein_coding MGP_129S1SvImJ_T0000093.1 MGP_129S1SvImJ_G0000072.1 mouse_genomes_project 12 117126132 117126597 - MGP_129S1SvImJ_P0000093 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0035947.1 MGP_129S1SvImJ_G0020114.1 mouse_genomes_project 12 111666571 111667525 + Dlk1 protein_coding retained_intron MGP_129S1SvImJ_T0035948.1 MGP_129S1SvImJ_G0020114.1 mouse_genomes_project 12 111666597 111677079 + MGP_129S1SvImJ_P0035948 Dlk1 protein_coding protein_coding MGP_129S1SvImJ_T0035949.1 MGP_129S1SvImJ_G0020114.1 mouse_genomes_project 12 111667197 111674443 + MGP_129S1SvImJ_P0035949 Dlk1 protein_coding protein_coding MGP_129S1SvImJ_T0035950.1 MGP_129S1SvImJ_G0020114.1 mouse_genomes_project 12 111667233 111674124 + MGP_129S1SvImJ_P0035950 Dlk1 protein_coding protein_coding MGP_129S1SvImJ_T0035951.1 MGP_129S1SvImJ_G0020114.1 mouse_genomes_project 12 111667233 111674361 + MGP_129S1SvImJ_P0035951 Dlk1 protein_coding protein_coding MGP_129S1SvImJ_T0035952.1 MGP_129S1SvImJ_G0020114.1 mouse_genomes_project 12 111667277 111677079 + MGP_129S1SvImJ_P0035952 Dlk1 protein_coding protein_coding MGP_129S1SvImJ_T0035953.1 MGP_129S1SvImJ_G0020114.1 mouse_genomes_project 12 111667397 111677079 + MGP_129S1SvImJ_P0035953 Dlk1 protein_coding protein_coding MGP_129S1SvImJ_T0035954.1 MGP_129S1SvImJ_G0020114.1 mouse_genomes_project 12 111667402 111674103 + MGP_129S1SvImJ_P0035954 Dlk1 protein_coding protein_coding MGP_129S1SvImJ_T0035955.1 MGP_129S1SvImJ_G0020114.1 mouse_genomes_project 12 111667937 111673505 + MGP_129S1SvImJ_P0035955 Dlk1 protein_coding protein_coding MGP_129S1SvImJ_T0035956.1 MGP_129S1SvImJ_G0020114.1 mouse_genomes_project 12 111673585 111674218 + MGP_129S1SvImJ_P0035956 Dlk1 protein_coding protein_coding MGP_129S1SvImJ_T0000038.1 MGP_129S1SvImJ_G0000031.1 mouse_genomes_project 12 115989976 115990029 - MGP_129S1SvImJ_P0000038 Ighj1 IG_J_gene IG_J_gene MGP_129S1SvImJ_T0012850.1 MGP_129S1SvImJ_G0010939.1 mouse_genomes_project 12 103465314 103465661 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0035285.1 MGP_129S1SvImJ_G0019907.1 mouse_genomes_project 12 82200780 82273280 - MGP_129S1SvImJ_P0035285 Map3k9 protein_coding protein_coding MGP_129S1SvImJ_T0035286.1 MGP_129S1SvImJ_G0019907.1 mouse_genomes_project 12 82203680 82272984 - MGP_129S1SvImJ_P0035286 Map3k9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034392.1 MGP_129S1SvImJ_G0019576.1 mouse_genomes_project 12 1755614 1768186 + MGP_129S1SvImJ_P0034392 BC068281 protein_coding protein_coding MGP_129S1SvImJ_T0034393.1 MGP_129S1SvImJ_G0019576.1 mouse_genomes_project 12 1763457 1774305 + MGP_129S1SvImJ_P0034393 BC068281 protein_coding protein_coding MGP_129S1SvImJ_T0036158.1 MGP_129S1SvImJ_G0020182.1 mouse_genomes_project 12 119270519 119329490 + MGP_129S1SvImJ_P0036158 Ncapg2 protein_coding protein_coding MGP_129S1SvImJ_T0035163.1 MGP_129S1SvImJ_G0019859.1 mouse_genomes_project 12 76531366 76557713 + MGP_129S1SvImJ_P0035163 Ppp1r36 protein_coding protein_coding MGP_129S1SvImJ_T0098468.1 MGP_129S1SvImJ_G0036553.1 mouse_genomes_project 12 43986019 43986103 + Gm22076 rRNA rRNA MGP_129S1SvImJ_T0036009.1 MGP_129S1SvImJ_G0020132.1 mouse_genomes_project 12 113804299 113818052 + MGP_129S1SvImJ_P0036009 Exoc3l4 protein_coding protein_coding MGP_129S1SvImJ_T0003401.1 MGP_129S1SvImJ_G0003126.1 mouse_genomes_project 12 196547 222583 - 1110002L01Rik antisense antisense MGP_129S1SvImJ_T0003402.1 MGP_129S1SvImJ_G0003126.1 mouse_genomes_project 12 198952 222312 - 1110002L01Rik antisense antisense MGP_129S1SvImJ_T0003403.1 MGP_129S1SvImJ_G0003126.1 mouse_genomes_project 12 200347 222286 - 1110002L01Rik antisense antisense MGP_129S1SvImJ_T0003404.1 MGP_129S1SvImJ_G0003126.1 mouse_genomes_project 12 200865 222319 - 1110002L01Rik antisense antisense MGP_129S1SvImJ_T0035878.1 MGP_129S1SvImJ_G0020095.1 mouse_genomes_project 12 107589955 107680075 + MGP_129S1SvImJ_P0035878 Ak7 protein_coding protein_coding MGP_129S1SvImJ_T0102184.1 MGP_129S1SvImJ_G0040018.1 mouse_genomes_project 12 118704899 118730514 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0034670.1 MGP_129S1SvImJ_G0019674.1 mouse_genomes_project 12 31212522 31311446 + MGP_129S1SvImJ_P0034670 Atxn7l1 protein_coding protein_coding MGP_129S1SvImJ_T0034671.1 MGP_129S1SvImJ_G0019674.1 mouse_genomes_project 12 31212540 31311446 + MGP_129S1SvImJ_P0034671 Atxn7l1 protein_coding protein_coding MGP_129S1SvImJ_T0034672.1 MGP_129S1SvImJ_G0019674.1 mouse_genomes_project 12 31212583 31435832 + MGP_129S1SvImJ_P0034672 Atxn7l1 protein_coding protein_coding MGP_129S1SvImJ_T0034673.1 MGP_129S1SvImJ_G0019674.1 mouse_genomes_project 12 31212592 31438294 + MGP_129S1SvImJ_P0034673 Atxn7l1 protein_coding protein_coding MGP_129S1SvImJ_T0034674.1 MGP_129S1SvImJ_G0019674.1 mouse_genomes_project 12 31212603 31388741 + MGP_129S1SvImJ_P0034674 Atxn7l1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034675.1 MGP_129S1SvImJ_G0019674.1 mouse_genomes_project 12 31212634 31391457 + Atxn7l1 protein_coding retained_intron MGP_129S1SvImJ_T0034676.1 MGP_129S1SvImJ_G0019674.1 mouse_genomes_project 12 31364045 31430909 + MGP_129S1SvImJ_P0034676 Atxn7l1 protein_coding protein_coding MGP_129S1SvImJ_T0034677.1 MGP_129S1SvImJ_G0019674.1 mouse_genomes_project 12 31376853 31407578 + MGP_129S1SvImJ_P0034677 Atxn7l1 protein_coding protein_coding MGP_129S1SvImJ_T0034678.1 MGP_129S1SvImJ_G0019674.1 mouse_genomes_project 12 31376865 31391457 + Atxn7l1 protein_coding retained_intron MGP_129S1SvImJ_T0034679.1 MGP_129S1SvImJ_G0019674.1 mouse_genomes_project 12 31376976 31388671 + MGP_129S1SvImJ_P0034679 Atxn7l1 protein_coding protein_coding MGP_129S1SvImJ_T0034680.1 MGP_129S1SvImJ_G0019674.1 mouse_genomes_project 12 31377973 31434993 + MGP_129S1SvImJ_P0034680 Atxn7l1 protein_coding protein_coding MGP_129S1SvImJ_T0034681.1 MGP_129S1SvImJ_G0019674.1 mouse_genomes_project 12 31377981 31388812 + Atxn7l1 protein_coding retained_intron MGP_129S1SvImJ_T0034682.1 MGP_129S1SvImJ_G0019674.1 mouse_genomes_project 12 31407942 31430914 + Atxn7l1 protein_coding retained_intron MGP_129S1SvImJ_T0034683.1 MGP_129S1SvImJ_G0019674.1 mouse_genomes_project 12 31429959 31435821 + MGP_129S1SvImJ_P0034683 Atxn7l1 protein_coding protein_coding MGP_129S1SvImJ_T0006471.1 MGP_129S1SvImJ_G0005395.1 mouse_genomes_project 12 108418328 108427586 - lincRNA lincRNA MGP_129S1SvImJ_T0006432.1 MGP_129S1SvImJ_G0005361.1 mouse_genomes_project 12 51434431 51436455 - 1700031P21Rik lincRNA lincRNA MGP_129S1SvImJ_T0034989.1 MGP_129S1SvImJ_G0019801.1 mouse_genomes_project 12 69458323 69504542 - MGP_129S1SvImJ_P0034989 Cdkl1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0009802.1 MGP_129S1SvImJ_G0007918.1 mouse_genomes_project 12 35065329 35065403 + Mir5099 miRNA miRNA MGP_129S1SvImJ_T0000367.1 MGP_129S1SvImJ_G0000309.1 mouse_genomes_project 12 58468963 58469032 + mt-Ti Mt_tRNA Mt_tRNA MGP_129S1SvImJ_T0034823.1 MGP_129S1SvImJ_G0019738.1 mouse_genomes_project 12 53691682 53738997 - MGP_129S1SvImJ_P0034823 Snx6 protein_coding protein_coding MGP_129S1SvImJ_T0003419.1 MGP_129S1SvImJ_G0003139.1 mouse_genomes_project 12 56781460 56813533 - 4921518K17Rik antisense antisense MGP_129S1SvImJ_T0098307.1 MGP_129S1SvImJ_G0036392.1 mouse_genomes_project 12 84768822 84769433 - pseudogene pseudogene MGP_129S1SvImJ_T0000086.1 MGP_129S1SvImJ_G0000066.1 mouse_genomes_project 12 116949210 116949685 - MGP_129S1SvImJ_P0000086 Ighv3-8 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0012817.1 MGP_129S1SvImJ_G0010906.1 mouse_genomes_project 12 55482914 55483145 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000114.1 MGP_129S1SvImJ_G0000087.1 mouse_genomes_project 12 117908956 118420338 - MGP_129S1SvImJ_P0000114 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0035870.1 MGP_129S1SvImJ_G0020090.1 mouse_genomes_project 12 107328503 107372447 + MGP_129S1SvImJ_P0035870 D430019H16Rik protein_coding protein_coding MGP_129S1SvImJ_T0034773.1 MGP_129S1SvImJ_G0019712.1 mouse_genomes_project 12 42897851 43194603 + MGP_129S1SvImJ_P0034773 Nrcam protein_coding protein_coding MGP_129S1SvImJ_T0034774.1 MGP_129S1SvImJ_G0019712.1 mouse_genomes_project 12 42897851 43194603 + MGP_129S1SvImJ_P0034774 Nrcam protein_coding protein_coding MGP_129S1SvImJ_T0034775.1 MGP_129S1SvImJ_G0019712.1 mouse_genomes_project 12 43110752 43191906 + MGP_129S1SvImJ_P0034775 Nrcam protein_coding unknown_likely_coding MGP_129S1SvImJ_T0100561.1 MGP_129S1SvImJ_G0038628.1 mouse_genomes_project 12 37844815 37844942 + Gm24069 snoRNA snoRNA MGP_129S1SvImJ_T0035552.1 MGP_129S1SvImJ_G0019980.1 mouse_genomes_project 12 88061578 88096753 - MGP_129S1SvImJ_P0035552 Tmed8 protein_coding protein_coding MGP_129S1SvImJ_T0035040.1 MGP_129S1SvImJ_G0019816.1 mouse_genomes_project 12 70902929 70916427 - MGP_129S1SvImJ_P0035040 Timm9 protein_coding protein_coding MGP_129S1SvImJ_T0035041.1 MGP_129S1SvImJ_G0019816.1 mouse_genomes_project 12 70902929 70916427 - MGP_129S1SvImJ_P0035041 Timm9 protein_coding protein_coding MGP_129S1SvImJ_T0000063.1 MGP_129S1SvImJ_G0000050.1 mouse_genomes_project 12 116463296 116463742 - MGP_129S1SvImJ_P0000063 Ighv2-9 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0035118.1 MGP_129S1SvImJ_G0019845.1 mouse_genomes_project 12 74896931 75194346 - MGP_129S1SvImJ_P0035118 Kcnh5 protein_coding protein_coding MGP_129S1SvImJ_T0035235.1 MGP_129S1SvImJ_G0019894.1 mouse_genomes_project 12 81191070 81291403 + MGP_129S1SvImJ_P0035235 Susd6 protein_coding protein_coding MGP_129S1SvImJ_T0035236.1 MGP_129S1SvImJ_G0019894.1 mouse_genomes_project 12 81191131 81291410 + MGP_129S1SvImJ_P0035236 Susd6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034572.1 MGP_129S1SvImJ_G0019640.1 mouse_genomes_project 12 26331950 26338108 - protein_coding processed_transcript MGP_129S1SvImJ_T0034573.1 MGP_129S1SvImJ_G0019640.1 mouse_genomes_project 12 26337449 26345999 - protein_coding processed_transcript MGP_129S1SvImJ_T0034574.1 MGP_129S1SvImJ_G0019640.1 mouse_genomes_project 12 26337677 26378785 - MGP_129S1SvImJ_P0034574 protein_coding protein_coding MGP_129S1SvImJ_T0034688.1 MGP_129S1SvImJ_G0019679.1 mouse_genomes_project 12 32201453 32440490 - MGP_129S1SvImJ_P0034688 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0034527.1 MGP_129S1SvImJ_G0019624.1 mouse_genomes_project 12 18870440 18877652 + MGP_129S1SvImJ_P0034527 Iah1 protein_coding protein_coding MGP_129S1SvImJ_T0003408.1 MGP_129S1SvImJ_G0003130.1 mouse_genomes_project 12 29440361 29441293 + Gm29542 antisense antisense MGP_129S1SvImJ_T0012855.1 MGP_129S1SvImJ_G0010944.1 mouse_genomes_project 12 108486055 108487724 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0035487.1 MGP_129S1SvImJ_G0019964.1 mouse_genomes_project 12 86546604 86620398 + MGP_129S1SvImJ_P0035487 Mfsd7c protein_coding protein_coding MGP_129S1SvImJ_T0035174.1 MGP_129S1SvImJ_G0019865.1 mouse_genomes_project 12 76918788 76922000 - MGP_129S1SvImJ_P0035174 protein_coding protein_coding MGP_129S1SvImJ_T0003423.1 MGP_129S1SvImJ_G0003142.1 mouse_genomes_project 12 70772026 70800981 - 3110056K07Rik antisense antisense MGP_129S1SvImJ_T0003424.1 MGP_129S1SvImJ_G0003142.1 mouse_genomes_project 12 70794649 70801217 - 3110056K07Rik antisense antisense MGP_129S1SvImJ_T0099302.1 MGP_129S1SvImJ_G0037369.1 mouse_genomes_project 12 10766208 10766315 - Gm24142 snRNA snRNA MGP_129S1SvImJ_T0003407.1 MGP_129S1SvImJ_G0003129.1 mouse_genomes_project 12 27950918 27953383 + Gm15691 antisense antisense MGP_129S1SvImJ_T0035390.1 MGP_129S1SvImJ_G0019933.1 mouse_genomes_project 12 85048949 85065474 - MGP_129S1SvImJ_P0035390 Fam161b protein_coding protein_coding MGP_129S1SvImJ_T0035391.1 MGP_129S1SvImJ_G0019933.1 mouse_genomes_project 12 85048957 85065462 - MGP_129S1SvImJ_P0035391 Fam161b protein_coding protein_coding MGP_129S1SvImJ_T0035392.1 MGP_129S1SvImJ_G0019933.1 mouse_genomes_project 12 85050132 85065433 - Fam161b protein_coding retained_intron MGP_129S1SvImJ_T0035393.1 MGP_129S1SvImJ_G0019933.1 mouse_genomes_project 12 85051999 85058496 - Fam161b protein_coding retained_intron MGP_129S1SvImJ_T0009861.1 MGP_129S1SvImJ_G0007977.1 mouse_genomes_project 12 111852585 111852664 + Mir370 miRNA miRNA MGP_129S1SvImJ_T0009872.1 MGP_129S1SvImJ_G0007988.1 mouse_genomes_project 12 111957128 111957225 + Mir329 miRNA miRNA MGP_129S1SvImJ_T0035644.1 MGP_129S1SvImJ_G0020004.1 mouse_genomes_project 12 99635223 99643887 + MGP_129S1SvImJ_P0035644 Gpr65 protein_coding protein_coding MGP_129S1SvImJ_T0035415.1 MGP_129S1SvImJ_G0019937.1 mouse_genomes_project 12 85123108 85124491 + MGP_129S1SvImJ_P0035415 Rnf113a2 protein_coding protein_coding MGP_129S1SvImJ_T0035851.1 MGP_129S1SvImJ_G0020078.1 mouse_genomes_project 12 106272118 106275127 + MGP_129S1SvImJ_P0035851 Gm1000 protein_coding protein_coding MGP_129S1SvImJ_T0100602.1 MGP_129S1SvImJ_G0038669.1 mouse_genomes_project 12 111888673 111888745 + Gm26922 snoRNA snoRNA MGP_129S1SvImJ_T0000279.1 MGP_129S1SvImJ_G0000221.1 mouse_genomes_project 12 117379532 117380017 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0034818.1 MGP_129S1SvImJ_G0019736.1 mouse_genomes_project 12 53570578 53581777 - MGP_129S1SvImJ_P0034818 Sptssa protein_coding protein_coding MGP_129S1SvImJ_T0034805.1 MGP_129S1SvImJ_G0019728.1 mouse_genomes_project 12 50698748 50800884 - MGP_129S1SvImJ_P0034805 Heatr5a protein_coding protein_coding MGP_129S1SvImJ_T0035719.1 MGP_129S1SvImJ_G0020025.1 mouse_genomes_project 12 103341463 103417044 - MGP_129S1SvImJ_P0035719 Fbln5 protein_coding protein_coding MGP_129S1SvImJ_T0035622.1 MGP_129S1SvImJ_G0019999.1 mouse_genomes_project 12 92666068 92706458 - MGP_129S1SvImJ_P0035622 Gtf2a1 protein_coding protein_coding MGP_129S1SvImJ_T0000880.1 MGP_129S1SvImJ_G0000813.1 mouse_genomes_project 12 23290156 23330152 - TEC TEC MGP_129S1SvImJ_T0034792.1 MGP_129S1SvImJ_G0019722.1 mouse_genomes_project 12 50133046 50163011 + MGP_129S1SvImJ_P0034792 G2e3 protein_coding protein_coding MGP_129S1SvImJ_T0034793.1 MGP_129S1SvImJ_G0019722.1 mouse_genomes_project 12 50133282 50159234 + MGP_129S1SvImJ_P0034793 G2e3 protein_coding protein_coding MGP_129S1SvImJ_T0034794.1 MGP_129S1SvImJ_G0019722.1 mouse_genomes_project 12 50133366 50159337 + MGP_129S1SvImJ_P0034794 G2e3 protein_coding protein_coding MGP_129S1SvImJ_T0034795.1 MGP_129S1SvImJ_G0019722.1 mouse_genomes_project 12 50143150 50149550 + G2e3 protein_coding retained_intron MGP_129S1SvImJ_T0034796.1 MGP_129S1SvImJ_G0019722.1 mouse_genomes_project 12 50156664 50160044 + G2e3 protein_coding retained_intron MGP_129S1SvImJ_T0035046.1 MGP_129S1SvImJ_G0019818.1 mouse_genomes_project 12 71090740 71103090 + MGP_129S1SvImJ_P0035046 Dact1 protein_coding protein_coding MGP_129S1SvImJ_T0035047.1 MGP_129S1SvImJ_G0019818.1 mouse_genomes_project 12 71090840 71101878 + MGP_129S1SvImJ_P0035047 Dact1 protein_coding protein_coding MGP_129S1SvImJ_T0035860.1 MGP_129S1SvImJ_G0020085.1 mouse_genomes_project 12 107017063 107024520 + MGP_129S1SvImJ_P0035860 Tcl1b1 protein_coding protein_coding MGP_129S1SvImJ_T0017334.1 MGP_129S1SvImJ_G0015232.1 mouse_genomes_project 12 73871565 73894711 - Gm15283 processed_transcript processed_transcript MGP_129S1SvImJ_T0000257.1 MGP_129S1SvImJ_G0000199.1 mouse_genomes_project 12 116170983 116171365 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0011339.1 MGP_129S1SvImJ_G0009455.1 mouse_genomes_project 12 1275279 1275565 + Gm22343 misc_RNA misc_RNA MGP_129S1SvImJ_T0036056.1 MGP_129S1SvImJ_G0020143.1 mouse_genomes_project 12 114234487 114248738 + MGP_129S1SvImJ_P0036056 Zfyve21 protein_coding protein_coding MGP_129S1SvImJ_T0036092.1 MGP_129S1SvImJ_G0020157.1 mouse_genomes_project 12 115147712 115151084 + MGP_129S1SvImJ_P0036092 Zbtb42 protein_coding protein_coding MGP_129S1SvImJ_T0036093.1 MGP_129S1SvImJ_G0020157.1 mouse_genomes_project 12 115147890 115148307 + MGP_129S1SvImJ_P0036093 Zbtb42 protein_coding protein_coding MGP_129S1SvImJ_T0034857.1 MGP_129S1SvImJ_G0019753.1 mouse_genomes_project 12 54916916 54954002 + MGP_129S1SvImJ_P0034857 Brms1l protein_coding protein_coding MGP_129S1SvImJ_T0000884.1 MGP_129S1SvImJ_G0000817.1 mouse_genomes_project 12 60160182 60172203 + TEC TEC MGP_129S1SvImJ_T0035957.1 MGP_129S1SvImJ_G0020115.1 mouse_genomes_project 12 111817786 111830332 - MGP_129S1SvImJ_P0035957 Rtl1 protein_coding protein_coding MGP_129S1SvImJ_T0034506.1 MGP_129S1SvImJ_G0019618.1 mouse_genomes_project 12 14711136 14754022 - MGP_129S1SvImJ_P0034506 Atp6v1c2 protein_coding protein_coding MGP_129S1SvImJ_T0034507.1 MGP_129S1SvImJ_G0019618.1 mouse_genomes_project 12 14711137 14754013 - MGP_129S1SvImJ_P0034507 Atp6v1c2 protein_coding protein_coding MGP_129S1SvImJ_T0034508.1 MGP_129S1SvImJ_G0019618.1 mouse_genomes_project 12 14711137 14753975 - MGP_129S1SvImJ_P0034508 Atp6v1c2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034509.1 MGP_129S1SvImJ_G0019618.1 mouse_genomes_project 12 14711138 14736147 - MGP_129S1SvImJ_P0034509 Atp6v1c2 protein_coding protein_coding MGP_129S1SvImJ_T0034510.1 MGP_129S1SvImJ_G0019618.1 mouse_genomes_project 12 14711274 14754461 - MGP_129S1SvImJ_P0034510 Atp6v1c2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034511.1 MGP_129S1SvImJ_G0019618.1 mouse_genomes_project 12 14725568 14758634 - MGP_129S1SvImJ_P0034511 Atp6v1c2 protein_coding protein_coding MGP_129S1SvImJ_T0034512.1 MGP_129S1SvImJ_G0019618.1 mouse_genomes_project 12 14736034 14754040 - MGP_129S1SvImJ_P0034512 Atp6v1c2 protein_coding protein_coding MGP_129S1SvImJ_T0034513.1 MGP_129S1SvImJ_G0019618.1 mouse_genomes_project 12 14736078 14758645 - MGP_129S1SvImJ_P0034513 Atp6v1c2 protein_coding protein_coding MGP_129S1SvImJ_T0000036.1 MGP_129S1SvImJ_G0000030.1 mouse_genomes_project 12 115989663 115989711 - MGP_129S1SvImJ_P0000036 Ighj2 IG_J_gene IG_J_gene MGP_129S1SvImJ_T0000037.1 MGP_129S1SvImJ_G0000030.1 mouse_genomes_project 12 115989709 115989763 - Ighj2 IG_J_gene processed_transcript MGP_129S1SvImJ_T0000278.1 MGP_129S1SvImJ_G0000220.1 mouse_genomes_project 12 117350243 117350675 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0009816.1 MGP_129S1SvImJ_G0007932.1 mouse_genomes_project 12 72310067 72310182 - Gm44392 miRNA miRNA MGP_129S1SvImJ_T0099316.1 MGP_129S1SvImJ_G0037383.1 mouse_genomes_project 12 53953887 53953992 + Gm24296 snRNA snRNA MGP_129S1SvImJ_T0035840.1 MGP_129S1SvImJ_G0020071.1 mouse_genomes_project 12 105996945 105998960 + Serpina3g protein_coding processed_transcript MGP_129S1SvImJ_T0035841.1 MGP_129S1SvImJ_G0020071.1 mouse_genomes_project 12 105996952 106005533 + MGP_129S1SvImJ_P0035841 Serpina3g protein_coding protein_coding MGP_129S1SvImJ_T0035842.1 MGP_129S1SvImJ_G0020071.1 mouse_genomes_project 12 105996959 106002150 + MGP_129S1SvImJ_P0035842 Serpina3g protein_coding protein_coding MGP_129S1SvImJ_T0035843.1 MGP_129S1SvImJ_G0020071.1 mouse_genomes_project 12 105996960 105999024 + MGP_129S1SvImJ_P0035843 Serpina3g protein_coding protein_coding MGP_129S1SvImJ_T0012827.1 MGP_129S1SvImJ_G0010916.1 mouse_genomes_project 12 71653941 71654850 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034714.1 MGP_129S1SvImJ_G0019695.1 mouse_genomes_project 12 35379884 35448343 + MGP_129S1SvImJ_P0034714 Meox2 protein_coding protein_coding MGP_129S1SvImJ_T0003428.1 MGP_129S1SvImJ_G0003146.1 mouse_genomes_project 12 81677156 81692091 + Gm3693 antisense antisense MGP_129S1SvImJ_T0006420.1 MGP_129S1SvImJ_G0005351.1 mouse_genomes_project 12 28297458 28352819 - 2310016D03Rik lincRNA lincRNA MGP_129S1SvImJ_T0036146.1 MGP_129S1SvImJ_G0020178.1 mouse_genomes_project 12 118896071 118910368 + MGP_129S1SvImJ_P0036146 Zfp386 protein_coding protein_coding MGP_129S1SvImJ_T0036147.1 MGP_129S1SvImJ_G0020178.1 mouse_genomes_project 12 118896111 118903423 + Zfp386 protein_coding retained_intron MGP_129S1SvImJ_T0036148.1 MGP_129S1SvImJ_G0020178.1 mouse_genomes_project 12 118896123 118913137 + MGP_129S1SvImJ_P0036148 Zfp386 protein_coding protein_coding MGP_129S1SvImJ_T0036149.1 MGP_129S1SvImJ_G0020178.1 mouse_genomes_project 12 118896176 118899975 + Zfp386 protein_coding retained_intron MGP_129S1SvImJ_T0017368.1 MGP_129S1SvImJ_G0015244.1 mouse_genomes_project 12 120032817 120039494 - Gm10421 processed_transcript antisense MGP_129S1SvImJ_T0017369.1 MGP_129S1SvImJ_G0015244.1 mouse_genomes_project 12 120033659 120039548 - Gm10421 processed_transcript retained_intron MGP_129S1SvImJ_T0017370.1 MGP_129S1SvImJ_G0015244.1 mouse_genomes_project 12 120039368 120039930 - Gm10421 processed_transcript antisense MGP_129S1SvImJ_T0035836.1 MGP_129S1SvImJ_G0020069.1 mouse_genomes_project 12 105904516 105911985 - MGP_129S1SvImJ_P0035836 Serpina3c protein_coding protein_coding MGP_129S1SvImJ_T0034560.1 MGP_129S1SvImJ_G0019633.1 mouse_genomes_project 12 22520505 22652990 + MGP_129S1SvImJ_P0034560 Mboat2 protein_coding protein_coding MGP_129S1SvImJ_T0034561.1 MGP_129S1SvImJ_G0019633.1 mouse_genomes_project 12 22520505 22652990 + MGP_129S1SvImJ_P0034561 Mboat2 protein_coding protein_coding MGP_129S1SvImJ_T0035989.1 MGP_129S1SvImJ_G0020123.1 mouse_genomes_project 12 113188040 113206823 + MGP_129S1SvImJ_P0035989 Zfp839 protein_coding protein_coding MGP_129S1SvImJ_T0009837.1 MGP_129S1SvImJ_G0007953.1 mouse_genomes_project 12 110799185 110799284 + Mir342 miRNA miRNA MGP_129S1SvImJ_T0035821.1 MGP_129S1SvImJ_G0020061.1 mouse_genomes_project 12 105685364 105706623 - MGP_129S1SvImJ_P0035821 protein_coding protein_coding MGP_129S1SvImJ_T0000296.1 MGP_129S1SvImJ_G0000238.1 mouse_genomes_project 12 118841984 118842416 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0000113.1 MGP_129S1SvImJ_G0000086.1 mouse_genomes_project 12 117891433 118420383 - MGP_129S1SvImJ_P0000113 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0034500.1 MGP_129S1SvImJ_G0019616.1 mouse_genomes_project 12 14589558 14594356 - MGP_129S1SvImJ_P0034500 Kcnf1 protein_coding protein_coding MGP_129S1SvImJ_T0012836.1 MGP_129S1SvImJ_G0010925.1 mouse_genomes_project 12 82066087 82066523 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000290.1 MGP_129S1SvImJ_G0000232.1 mouse_genomes_project 12 118727635 118727933 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0035522.1 MGP_129S1SvImJ_G0019971.1 mouse_genomes_project 12 87537888 87552825 + MGP_129S1SvImJ_P0035522 Vash1 protein_coding protein_coding MGP_129S1SvImJ_T0009890.1 MGP_129S1SvImJ_G0008006.1 mouse_genomes_project 12 111972466 111972589 + Gm27379 miRNA miRNA MGP_129S1SvImJ_T0034809.1 MGP_129S1SvImJ_G0019731.1 mouse_genomes_project 12 50929836 51140783 + MGP_129S1SvImJ_P0034809 Nubpl protein_coding protein_coding MGP_129S1SvImJ_T0034810.1 MGP_129S1SvImJ_G0019731.1 mouse_genomes_project 12 50929855 50978173 + Nubpl protein_coding retained_intron MGP_129S1SvImJ_T0034811.1 MGP_129S1SvImJ_G0019731.1 mouse_genomes_project 12 50929860 50933184 + Nubpl protein_coding retained_intron MGP_129S1SvImJ_T0034812.1 MGP_129S1SvImJ_G0019731.1 mouse_genomes_project 12 50966255 51129725 + MGP_129S1SvImJ_P0034812 Nubpl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0100551.1 MGP_129S1SvImJ_G0038618.1 mouse_genomes_project 12 14996867 14997003 + Gm22748 snoRNA snoRNA MGP_129S1SvImJ_T0000270.1 MGP_129S1SvImJ_G0000212.1 mouse_genomes_project 12 116952592 116952883 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0034616.1 MGP_129S1SvImJ_G0019658.1 mouse_genomes_project 12 29200546 29204111 + Lamb1 protein_coding retained_intron MGP_129S1SvImJ_T0034617.1 MGP_129S1SvImJ_G0019658.1 mouse_genomes_project 12 29200549 29202045 + MGP_129S1SvImJ_P0034617 Lamb1 protein_coding protein_coding MGP_129S1SvImJ_T0034618.1 MGP_129S1SvImJ_G0019658.1 mouse_genomes_project 12 29200652 29264877 + MGP_129S1SvImJ_P0034618 Lamb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034619.1 MGP_129S1SvImJ_G0019658.1 mouse_genomes_project 12 29200673 29264795 + MGP_129S1SvImJ_P0034619 Lamb1 protein_coding protein_coding MGP_129S1SvImJ_T0034620.1 MGP_129S1SvImJ_G0019658.1 mouse_genomes_project 12 29211889 29223257 + Lamb1 protein_coding retained_intron MGP_129S1SvImJ_T0034621.1 MGP_129S1SvImJ_G0019658.1 mouse_genomes_project 12 29213408 29214173 + Lamb1 protein_coding retained_intron MGP_129S1SvImJ_T0034622.1 MGP_129S1SvImJ_G0019658.1 mouse_genomes_project 12 29258807 29259741 + Lamb1 protein_coding retained_intron MGP_129S1SvImJ_T0034461.1 MGP_129S1SvImJ_G0019602.1 mouse_genomes_project 12 9463513 9580532 + MGP_129S1SvImJ_P0034461 Fam49a protein_coding protein_coding MGP_129S1SvImJ_T0034462.1 MGP_129S1SvImJ_G0019602.1 mouse_genomes_project 12 9463513 9580532 + MGP_129S1SvImJ_P0034462 Fam49a protein_coding protein_coding MGP_129S1SvImJ_T0012871.1 MGP_129S1SvImJ_G0010960.1 mouse_genomes_project 12 118852539 118853701 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034838.1 MGP_129S1SvImJ_G0019744.1 mouse_genomes_project 12 54049836 54076685 + MGP_129S1SvImJ_P0034838 protein_coding protein_coding MGP_129S1SvImJ_T0035999.1 MGP_129S1SvImJ_G0020126.1 mouse_genomes_project 12 113396541 113478511 + MGP_129S1SvImJ_P0035999 Rcor1 protein_coding protein_coding MGP_129S1SvImJ_T0003429.1 MGP_129S1SvImJ_G0003147.1 mouse_genomes_project 12 81951888 81956647 + Gm28370 antisense antisense MGP_129S1SvImJ_T0009885.1 MGP_129S1SvImJ_G0008001.1 mouse_genomes_project 12 111967958 111968037 + Mir300 miRNA miRNA MGP_129S1SvImJ_T0009912.1 MGP_129S1SvImJ_G0008028.1 mouse_genomes_project 12 115120071 115120146 - Mir6939 miRNA miRNA MGP_129S1SvImJ_T0009856.1 MGP_129S1SvImJ_G0007972.1 mouse_genomes_project 12 111825341 111825421 - Mir3071 miRNA miRNA MGP_129S1SvImJ_T0006503.1 MGP_129S1SvImJ_G0005413.1 mouse_genomes_project 12 111973409 111994277 + Mirg lincRNA lincRNA MGP_129S1SvImJ_T0006504.1 MGP_129S1SvImJ_G0005413.1 mouse_genomes_project 12 111973410 111974487 + Mirg lincRNA lincRNA MGP_129S1SvImJ_T0006505.1 MGP_129S1SvImJ_G0005413.1 mouse_genomes_project 12 111973921 111994277 + Mirg lincRNA lincRNA MGP_129S1SvImJ_T0006506.1 MGP_129S1SvImJ_G0005413.1 mouse_genomes_project 12 111974604 111994279 + Mirg lincRNA lincRNA MGP_129S1SvImJ_T0006507.1 MGP_129S1SvImJ_G0005413.1 mouse_genomes_project 12 111978626 111994277 + Mirg lincRNA lincRNA MGP_129S1SvImJ_T0006508.1 MGP_129S1SvImJ_G0005413.1 mouse_genomes_project 12 111978626 111987371 + Mirg lincRNA lincRNA MGP_129S1SvImJ_T0006509.1 MGP_129S1SvImJ_G0005413.1 mouse_genomes_project 12 111978630 111993002 + Mirg lincRNA lincRNA MGP_129S1SvImJ_T0006510.1 MGP_129S1SvImJ_G0005413.1 mouse_genomes_project 12 111981339 111983699 + Mirg lincRNA lincRNA MGP_129S1SvImJ_T0006511.1 MGP_129S1SvImJ_G0005413.1 mouse_genomes_project 12 111981417 111985141 + Mirg lincRNA lincRNA MGP_129S1SvImJ_T0006512.1 MGP_129S1SvImJ_G0005413.1 mouse_genomes_project 12 111987438 111994277 + Mirg lincRNA lincRNA MGP_129S1SvImJ_T0006513.1 MGP_129S1SvImJ_G0005413.1 mouse_genomes_project 12 111992721 111994274 + Mirg lincRNA lincRNA MGP_129S1SvImJ_T0006514.1 MGP_129S1SvImJ_G0005413.1 mouse_genomes_project 12 111992782 111994277 + Mirg lincRNA lincRNA MGP_129S1SvImJ_T0035732.1 MGP_129S1SvImJ_G0020029.1 mouse_genomes_project 12 103746051 103893006 + MGP_129S1SvImJ_P0035732 Slc24a4 protein_coding protein_coding MGP_129S1SvImJ_T0035733.1 MGP_129S1SvImJ_G0020029.1 mouse_genomes_project 12 103746492 103892664 + MGP_129S1SvImJ_P0035733 Slc24a4 protein_coding protein_coding MGP_129S1SvImJ_T0035734.1 MGP_129S1SvImJ_G0020029.1 mouse_genomes_project 12 103746708 103892412 + MGP_129S1SvImJ_P0035734 Slc24a4 protein_coding protein_coding MGP_129S1SvImJ_T0035941.1 MGP_129S1SvImJ_G0020112.1 mouse_genomes_project 12 111055910 111204481 + MGP_129S1SvImJ_P0035941 Wdr25 protein_coding protein_coding MGP_129S1SvImJ_T0035942.1 MGP_129S1SvImJ_G0020112.1 mouse_genomes_project 12 111055955 111204354 + MGP_129S1SvImJ_P0035942 Wdr25 protein_coding protein_coding MGP_129S1SvImJ_T0006447.1 MGP_129S1SvImJ_G0005372.1 mouse_genomes_project 12 81156089 81158951 + Gm26796 lincRNA lincRNA MGP_129S1SvImJ_T0009844.1 MGP_129S1SvImJ_G0007960.1 mouse_genomes_project 12 111808833 111808916 + Mir493 miRNA miRNA MGP_129S1SvImJ_T0035292.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83142126 83633442 + MGP_129S1SvImJ_P0035292 Rgs6 protein_coding protein_coding MGP_129S1SvImJ_T0035293.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83175577 83753303 + MGP_129S1SvImJ_P0035293 Rgs6 protein_coding protein_coding MGP_129S1SvImJ_T0035294.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83175866 83684685 + MGP_129S1SvImJ_P0035294 Rgs6 protein_coding protein_coding MGP_129S1SvImJ_T0035295.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83175886 83753572 + MGP_129S1SvImJ_P0035295 Rgs6 protein_coding protein_coding MGP_129S1SvImJ_T0035296.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83175979 83754144 + MGP_129S1SvImJ_P0035296 Rgs6 protein_coding protein_coding MGP_129S1SvImJ_T0035297.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83176440 83754700 + MGP_129S1SvImJ_P0035297 Rgs6 protein_coding protein_coding MGP_129S1SvImJ_T0035298.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83176440 83757388 + MGP_129S1SvImJ_P0035298 Rgs6 protein_coding protein_coding MGP_129S1SvImJ_T0035299.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83176513 83753678 + MGP_129S1SvImJ_P0035299 Rgs6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035300.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83176528 83652311 + MGP_129S1SvImJ_P0035300 Rgs6 protein_coding protein_coding MGP_129S1SvImJ_T0035301.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83176576 83637220 + MGP_129S1SvImJ_P0035301 Rgs6 protein_coding protein_coding MGP_129S1SvImJ_T0035302.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83176595 83753425 + MGP_129S1SvImJ_P0035302 Rgs6 protein_coding protein_coding MGP_129S1SvImJ_T0035303.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83176790 83637158 + MGP_129S1SvImJ_P0035303 Rgs6 protein_coding protein_coding MGP_129S1SvImJ_T0035304.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83176966 83177934 + Rgs6 protein_coding retained_intron MGP_129S1SvImJ_T0035305.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83204350 83728522 + MGP_129S1SvImJ_P0035305 Rgs6 protein_coding protein_coding MGP_129S1SvImJ_T0035306.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83204350 83732449 + MGP_129S1SvImJ_P0035306 Rgs6 protein_coding protein_coding MGP_129S1SvImJ_T0035307.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83204350 83753303 + MGP_129S1SvImJ_P0035307 Rgs6 protein_coding protein_coding MGP_129S1SvImJ_T0035308.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83204350 83732449 + MGP_129S1SvImJ_P0035308 Rgs6 protein_coding protein_coding MGP_129S1SvImJ_T0035309.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83204350 83753303 + MGP_129S1SvImJ_P0035309 Rgs6 protein_coding protein_coding MGP_129S1SvImJ_T0035310.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83204350 83732572 + MGP_129S1SvImJ_P0035310 Rgs6 protein_coding protein_coding MGP_129S1SvImJ_T0035311.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83632839 83633970 + Rgs6 protein_coding retained_intron MGP_129S1SvImJ_T0035312.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83700472 83753539 + MGP_129S1SvImJ_P0035312 Rgs6 protein_coding protein_coding MGP_129S1SvImJ_T0035313.1 MGP_129S1SvImJ_G0019911.1 mouse_genomes_project 12 83711009 83732401 + Rgs6 protein_coding retained_intron MGP_129S1SvImJ_T0009805.1 MGP_129S1SvImJ_G0007921.1 mouse_genomes_project 12 42777486 42777547 + Mir5627 miRNA miRNA MGP_129S1SvImJ_T0012862.1 MGP_129S1SvImJ_G0010951.1 mouse_genomes_project 12 115668819 115669639 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0035360.1 MGP_129S1SvImJ_G0019923.1 mouse_genomes_project 12 84679727 84694238 + MGP_129S1SvImJ_P0035360 protein_coding protein_coding MGP_129S1SvImJ_T0035116.1 MGP_129S1SvImJ_G0019843.1 mouse_genomes_project 12 74260464 74263474 + MGP_129S1SvImJ_P0035116 Dbpht2 protein_coding protein_coding MGP_129S1SvImJ_T0100598.1 MGP_129S1SvImJ_G0038665.1 mouse_genomes_project 12 111880175 111880249 + Gm24895 snoRNA snoRNA MGP_129S1SvImJ_T0006451.1 MGP_129S1SvImJ_G0005376.1 mouse_genomes_project 12 84719754 84735578 - 4732463B04Rik lincRNA lincRNA MGP_129S1SvImJ_T0034808.1 MGP_129S1SvImJ_G0019730.1 mouse_genomes_project 12 50861784 50866997 - MGP_129S1SvImJ_P0034808 Gpr33 protein_coding protein_coding MGP_129S1SvImJ_T0009863.1 MGP_129S1SvImJ_G0007979.1 mouse_genomes_project 12 111952711 111952777 + Mir379 miRNA miRNA MGP_129S1SvImJ_T0035540.1 MGP_129S1SvImJ_G0019975.1 mouse_genomes_project 12 87864676 87869972 - MGP_129S1SvImJ_P0035540 Zdhhc22 protein_coding protein_coding MGP_129S1SvImJ_T0011355.1 MGP_129S1SvImJ_G0009471.1 mouse_genomes_project 12 92111727 92112050 + Gm26477 misc_RNA misc_RNA MGP_129S1SvImJ_T0034662.1 MGP_129S1SvImJ_G0019671.1 mouse_genomes_project 12 30852510 30891954 + MGP_129S1SvImJ_P0034662 Nampt protein_coding protein_coding MGP_129S1SvImJ_T0009821.1 MGP_129S1SvImJ_G0007937.1 mouse_genomes_project 12 81611503 81611587 + Mir3067 miRNA miRNA MGP_129S1SvImJ_T0098465.1 MGP_129S1SvImJ_G0036550.1 mouse_genomes_project 12 23416543 23416649 + Gm22527 rRNA rRNA MGP_129S1SvImJ_T0035747.1 MGP_129S1SvImJ_G0020033.1 mouse_genomes_project 12 104191299 104201779 + MGP_129S1SvImJ_P0035747 Chga protein_coding protein_coding MGP_129S1SvImJ_T0012837.1 MGP_129S1SvImJ_G0010926.1 mouse_genomes_project 12 83096791 83097034 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009901.1 MGP_129S1SvImJ_G0008017.1 mouse_genomes_project 12 111986795 111986875 - Gm24321 miRNA miRNA MGP_129S1SvImJ_T0003437.1 MGP_129S1SvImJ_G0003155.1 mouse_genomes_project 12 92811479 92820436 + Gm16876 antisense antisense MGP_129S1SvImJ_T0035356.1 MGP_129S1SvImJ_G0019919.1 mouse_genomes_project 12 84617177 84619523 + MGP_129S1SvImJ_P0035356 2410016O06Rik protein_coding protein_coding MGP_129S1SvImJ_T0003409.1 MGP_129S1SvImJ_G0003131.1 mouse_genomes_project 12 31260235 31276664 - antisense antisense MGP_129S1SvImJ_T0000008.1 MGP_129S1SvImJ_G0000006.1 mouse_genomes_project 12 115845873 115847522 - MGP_129S1SvImJ_P0000008 Ighg2b IG_C_gene IG_C_gene MGP_129S1SvImJ_T0034642.1 MGP_129S1SvImJ_G0019666.1 mouse_genomes_project 12 29674061 29681121 - MGP_129S1SvImJ_P0034642 Gpr22 protein_coding protein_coding MGP_129S1SvImJ_T0034643.1 MGP_129S1SvImJ_G0019666.1 mouse_genomes_project 12 29675906 29681142 - MGP_129S1SvImJ_P0034643 Gpr22 protein_coding protein_coding MGP_129S1SvImJ_T0034644.1 MGP_129S1SvImJ_G0019666.1 mouse_genomes_project 12 29676643 29681128 - MGP_129S1SvImJ_P0034644 Gpr22 protein_coding protein_coding MGP_129S1SvImJ_T0035646.1 MGP_129S1SvImJ_G0020006.1 mouse_genomes_project 12 100011506 100067455 + MGP_129S1SvImJ_P0035646 Spata7 protein_coding protein_coding MGP_129S1SvImJ_T0035647.1 MGP_129S1SvImJ_G0020006.1 mouse_genomes_project 12 100011511 100022012 + Spata7 protein_coding retained_intron MGP_129S1SvImJ_T0035648.1 MGP_129S1SvImJ_G0020006.1 mouse_genomes_project 12 100011516 100067455 + MGP_129S1SvImJ_P0035648 Spata7 protein_coding protein_coding MGP_129S1SvImJ_T0035649.1 MGP_129S1SvImJ_G0020006.1 mouse_genomes_project 12 100011539 100016073 + Spata7 protein_coding retained_intron MGP_129S1SvImJ_T0035650.1 MGP_129S1SvImJ_G0020006.1 mouse_genomes_project 12 100011546 100067452 + MGP_129S1SvImJ_P0035650 Spata7 protein_coding protein_coding MGP_129S1SvImJ_T0035651.1 MGP_129S1SvImJ_G0020006.1 mouse_genomes_project 12 100060266 100066918 + Spata7 protein_coding retained_intron MGP_129S1SvImJ_T0009864.1 MGP_129S1SvImJ_G0007980.1 mouse_genomes_project 12 111953822 111953904 + Mir411 miRNA miRNA MGP_129S1SvImJ_T0100605.1 MGP_129S1SvImJ_G0038672.1 mouse_genomes_project 12 111893414 111893486 + Gm27604 snoRNA snoRNA MGP_129S1SvImJ_T0006411.1 MGP_129S1SvImJ_G0005345.1 mouse_genomes_project 12 10012774 10019075 + Platr19 lincRNA lincRNA MGP_129S1SvImJ_T0035752.1 MGP_129S1SvImJ_G0020035.1 mouse_genomes_project 12 104375341 104416280 - MGP_129S1SvImJ_P0035752 Gm28051 protein_coding protein_coding MGP_129S1SvImJ_T0035000.1 MGP_129S1SvImJ_G0019803.1 mouse_genomes_project 12 69609246 69689783 + MGP_129S1SvImJ_P0035000 Atl1 protein_coding protein_coding MGP_129S1SvImJ_T0034759.1 MGP_129S1SvImJ_G0019705.1 mouse_genomes_project 12 38863098 39280689 + MGP_129S1SvImJ_P0034759 Dock4 protein_coding protein_coding MGP_129S1SvImJ_T0036181.1 MGP_129S1SvImJ_G0020191.1 mouse_genomes_project 12 122447604 122473987 + MGP_129S1SvImJ_P0036181 Macc1 protein_coding protein_coding MGP_129S1SvImJ_T0035587.1 MGP_129S1SvImJ_G0019991.1 mouse_genomes_project 12 88538818 88550592 + MGP_129S1SvImJ_P0035587 Oog1 protein_coding protein_coding MGP_129S1SvImJ_T0009795.1 MGP_129S1SvImJ_G0007911.1 mouse_genomes_project 12 24147686 24147796 - Mir6538 miRNA miRNA MGP_129S1SvImJ_T0035146.1 MGP_129S1SvImJ_G0019852.1 mouse_genomes_project 12 76196002 76262337 - MGP_129S1SvImJ_P0035146 Esr2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035147.1 MGP_129S1SvImJ_G0019852.1 mouse_genomes_project 12 76196002 76262337 - MGP_129S1SvImJ_P0035147 Esr2 protein_coding protein_coding MGP_129S1SvImJ_T0035148.1 MGP_129S1SvImJ_G0019852.1 mouse_genomes_project 12 76196002 76250067 - MGP_129S1SvImJ_P0035148 Esr2 protein_coding protein_coding MGP_129S1SvImJ_T0035149.1 MGP_129S1SvImJ_G0019852.1 mouse_genomes_project 12 76196022 76262337 - MGP_129S1SvImJ_P0035149 Esr2 protein_coding protein_coding MGP_129S1SvImJ_T0012826.1 MGP_129S1SvImJ_G0010915.1 mouse_genomes_project 12 68802346 68802983 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0035284.1 MGP_129S1SvImJ_G0019906.1 mouse_genomes_project 12 82108712 82143104 + MGP_129S1SvImJ_P0035284 Ttc9 protein_coding protein_coding MGP_129S1SvImJ_T0034695.1 MGP_129S1SvImJ_G0019684.1 mouse_genomes_project 12 33704145 33739715 - MGP_129S1SvImJ_P0034695 Ahr protein_coding protein_coding MGP_129S1SvImJ_T0034696.1 MGP_129S1SvImJ_G0019684.1 mouse_genomes_project 12 33711036 33739298 - MGP_129S1SvImJ_P0034696 Ahr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034697.1 MGP_129S1SvImJ_G0019684.1 mouse_genomes_project 12 33720590 33731543 - Ahr protein_coding retained_intron MGP_129S1SvImJ_T0036157.1 MGP_129S1SvImJ_G0020181.1 mouse_genomes_project 12 119143798 119235990 + MGP_129S1SvImJ_P0036157 Esyt2 protein_coding protein_coding MGP_129S1SvImJ_T0035960.1 MGP_129S1SvImJ_G0020117.1 mouse_genomes_project 12 112747516 112878277 + MGP_129S1SvImJ_P0035960 Ppp2r5c protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035961.1 MGP_129S1SvImJ_G0020117.1 mouse_genomes_project 12 112786700 112889642 + MGP_129S1SvImJ_P0035961 Ppp2r5c protein_coding protein_coding MGP_129S1SvImJ_T0035962.1 MGP_129S1SvImJ_G0020117.1 mouse_genomes_project 12 112786700 112889642 + MGP_129S1SvImJ_P0035962 Ppp2r5c protein_coding protein_coding MGP_129S1SvImJ_T0006456.1 MGP_129S1SvImJ_G0005381.1 mouse_genomes_project 12 88235723 88238742 + Gm26764 lincRNA lincRNA MGP_129S1SvImJ_T0100590.1 MGP_129S1SvImJ_G0038657.1 mouse_genomes_project 12 103879401 103879616 - Gm25203 snoRNA snoRNA MGP_129S1SvImJ_T0035229.1 MGP_129S1SvImJ_G0019891.1 mouse_genomes_project 12 81026124 81074078 + MGP_129S1SvImJ_P0035229 Slc39a9 protein_coding protein_coding MGP_129S1SvImJ_T0035197.1 MGP_129S1SvImJ_G0019872.1 mouse_genomes_project 12 79013578 79115804 + MGP_129S1SvImJ_P0035197 Mpp5 protein_coding protein_coding MGP_129S1SvImJ_T0017337.1 MGP_129S1SvImJ_G0015235.1 mouse_genomes_project 12 92801638 92812883 - Gm8378 processed_transcript processed_transcript MGP_129S1SvImJ_T0017338.1 MGP_129S1SvImJ_G0015235.1 mouse_genomes_project 12 92809392 92812928 - Gm8378 processed_transcript processed_transcript MGP_129S1SvImJ_T0017339.1 MGP_129S1SvImJ_G0015235.1 mouse_genomes_project 12 92811280 92812928 - Gm8378 processed_transcript processed_transcript MGP_129S1SvImJ_T0035742.1 MGP_129S1SvImJ_G0020031.1 mouse_genomes_project 12 104028812 104054258 - MGP_129S1SvImJ_P0035742 Lgmn protein_coding protein_coding MGP_129S1SvImJ_T0035743.1 MGP_129S1SvImJ_G0020031.1 mouse_genomes_project 12 104028826 104067249 - MGP_129S1SvImJ_P0035743 Lgmn protein_coding protein_coding MGP_129S1SvImJ_T0035744.1 MGP_129S1SvImJ_G0020031.1 mouse_genomes_project 12 104034830 104043157 - Lgmn protein_coding retained_intron MGP_129S1SvImJ_T0009815.1 MGP_129S1SvImJ_G0007931.1 mouse_genomes_project 12 71951634 71951743 - Gm24466 miRNA miRNA MGP_129S1SvImJ_T0035187.1 MGP_129S1SvImJ_G0019867.1 mouse_genomes_project 12 77085198 77112907 - MGP_129S1SvImJ_P0035187 Max protein_coding protein_coding MGP_129S1SvImJ_T0035188.1 MGP_129S1SvImJ_G0019867.1 mouse_genomes_project 12 77085198 77112907 - MGP_129S1SvImJ_P0035188 Max protein_coding protein_coding MGP_129S1SvImJ_T0035523.1 MGP_129S1SvImJ_G0019972.1 mouse_genomes_project 12 87562485 87588245 - MGP_129S1SvImJ_P0035523 Angel1 protein_coding protein_coding MGP_129S1SvImJ_T0035524.1 MGP_129S1SvImJ_G0019972.1 mouse_genomes_project 12 87564178 87568153 - Angel1 protein_coding processed_transcript MGP_129S1SvImJ_T0035525.1 MGP_129S1SvImJ_G0019972.1 mouse_genomes_project 12 87564296 87578524 - Angel1 protein_coding processed_transcript MGP_129S1SvImJ_T0035526.1 MGP_129S1SvImJ_G0019972.1 mouse_genomes_project 12 87564338 87567948 - Angel1 protein_coding processed_transcript MGP_129S1SvImJ_T0035527.1 MGP_129S1SvImJ_G0019972.1 mouse_genomes_project 12 87564422 87580068 - Angel1 protein_coding processed_transcript MGP_129S1SvImJ_T0035528.1 MGP_129S1SvImJ_G0019972.1 mouse_genomes_project 12 87580227 87583821 - Angel1 protein_coding processed_transcript MGP_129S1SvImJ_T0000256.1 MGP_129S1SvImJ_G0000198.1 mouse_genomes_project 12 116137258 116137695 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0034382.1 MGP_129S1SvImJ_G0019568.1 mouse_genomes_project 12 1488351 1488453 - MGP_129S1SvImJ_P0034382 Gm3625 protein_coding protein_coding MGP_129S1SvImJ_T0034435.1 MGP_129S1SvImJ_G0019588.1 mouse_genomes_project 12 5840951 5863718 + MGP_129S1SvImJ_P0034435 Sdc1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034436.1 MGP_129S1SvImJ_G0019588.1 mouse_genomes_project 12 5841334 5859891 + Sdc1 protein_coding retained_intron MGP_129S1SvImJ_T0034437.1 MGP_129S1SvImJ_G0019588.1 mouse_genomes_project 12 5841813 5860456 + Sdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0102183.1 MGP_129S1SvImJ_G0040017.1 mouse_genomes_project 12 118704895 118730514 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0000012.1 MGP_129S1SvImJ_G0000009.1 mouse_genomes_project 12 115963956 115973578 - MGP_129S1SvImJ_P0000012 Ighd IG_C_gene IG_C_gene MGP_129S1SvImJ_T0000013.1 MGP_129S1SvImJ_G0000009.1 mouse_genomes_project 12 115966898 115973578 - MGP_129S1SvImJ_P0000013 Ighd IG_C_gene IG_C_gene MGP_129S1SvImJ_T0036141.1 MGP_129S1SvImJ_G0000009.1 mouse_genomes_project 12 115964883 115973558 - MGP_129S1SvImJ_P0036141 Ighd IG_C_gene unknown_likely_coding MGP_129S1SvImJ_T0036142.1 MGP_129S1SvImJ_G0000009.1 mouse_genomes_project 12 115964883 115973417 - MGP_129S1SvImJ_P0036142 Ighd IG_C_gene unknown_likely_coding MGP_129S1SvImJ_T0034946.1 MGP_129S1SvImJ_G0019782.1 mouse_genomes_project 12 64710663 64713601 + MGP_129S1SvImJ_P0034946 Wdr20rt protein_coding protein_coding MGP_129S1SvImJ_T0036059.1 MGP_129S1SvImJ_G0020145.1 mouse_genomes_project 12 114398033 114403635 - MGP_129S1SvImJ_P0036059 2010107E04Rik protein_coding protein_coding MGP_129S1SvImJ_T0009922.1 MGP_129S1SvImJ_G0008038.1 mouse_genomes_project 12 120142540 120142609 + Mir153 miRNA miRNA MGP_129S1SvImJ_T0011356.1 MGP_129S1SvImJ_G0009472.1 mouse_genomes_project 12 97533031 97533328 - Gm26480 misc_RNA misc_RNA MGP_129S1SvImJ_T0099299.1 MGP_129S1SvImJ_G0037366.1 mouse_genomes_project 12 1929136 1929239 - Gm23167 snRNA snRNA MGP_129S1SvImJ_T0009831.1 MGP_129S1SvImJ_G0007947.1 mouse_genomes_project 12 101435010 101435088 - Gm23291 miRNA miRNA MGP_129S1SvImJ_T0098474.1 MGP_129S1SvImJ_G0036559.1 mouse_genomes_project 12 82690200 82690296 + n-R5s62 rRNA rRNA MGP_129S1SvImJ_T0036007.1 MGP_129S1SvImJ_G0020130.1 mouse_genomes_project 12 113670296 113765330 - MGP_129S1SvImJ_P0036007 Cdc42bpb protein_coding protein_coding MGP_129S1SvImJ_T0003431.1 MGP_129S1SvImJ_G0003149.1 mouse_genomes_project 12 83513163 83519799 - 1700085C21Rik antisense antisense MGP_129S1SvImJ_T0034847.1 MGP_129S1SvImJ_G0019748.1 mouse_genomes_project 12 54426282 54461975 + MGP_129S1SvImJ_P0034847 Psma6 protein_coding protein_coding MGP_129S1SvImJ_T0034848.1 MGP_129S1SvImJ_G0019748.1 mouse_genomes_project 12 54441058 54462119 + MGP_129S1SvImJ_P0034848 Psma6 protein_coding protein_coding MGP_129S1SvImJ_T0034849.1 MGP_129S1SvImJ_G0019748.1 mouse_genomes_project 12 54441078 54462106 + MGP_129S1SvImJ_P0034849 Psma6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034850.1 MGP_129S1SvImJ_G0019748.1 mouse_genomes_project 12 54449666 54454258 + Psma6 protein_coding processed_transcript MGP_129S1SvImJ_T0000118.1 MGP_129S1SvImJ_G0000091.1 mouse_genomes_project 12 118296760 118420338 - MGP_129S1SvImJ_P0000118 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0035287.1 MGP_129S1SvImJ_G0019908.1 mouse_genomes_project 12 82355682 82504226 + MGP_129S1SvImJ_P0035287 Pcnx protein_coding protein_coding MGP_129S1SvImJ_T0035288.1 MGP_129S1SvImJ_G0019908.1 mouse_genomes_project 12 82356572 82504228 + MGP_129S1SvImJ_P0035288 Pcnx protein_coding unknown_likely_coding MGP_129S1SvImJ_T0009830.1 MGP_129S1SvImJ_G0007946.1 mouse_genomes_project 12 92922340 92922409 - Gm22015 miRNA miRNA MGP_129S1SvImJ_T0000108.1 MGP_129S1SvImJ_G0000082.1 mouse_genomes_project 12 117766481 117766915 - MGP_129S1SvImJ_P0000108 Ighv8-4 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000109.1 MGP_129S1SvImJ_G0000082.1 mouse_genomes_project 12 117766481 117766775 - MGP_129S1SvImJ_P0000109 Ighv8-4 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0012807.1 MGP_129S1SvImJ_G0010896.1 mouse_genomes_project 12 11040191 11041167 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000895.1 MGP_129S1SvImJ_G0000828.1 mouse_genomes_project 12 114788232 114790977 - TEC TEC MGP_129S1SvImJ_T0098306.1 MGP_129S1SvImJ_G0036391.1 mouse_genomes_project 12 54894932 54895902 + pseudogene pseudogene MGP_129S1SvImJ_T0035060.1 MGP_129S1SvImJ_G0019823.1 mouse_genomes_project 12 71919892 72006105 - MGP_129S1SvImJ_P0035060 Ccdc175 protein_coding protein_coding MGP_129S1SvImJ_T0006409.1 MGP_129S1SvImJ_G0005343.1 mouse_genomes_project 12 6675699 6681158 - 1700022H16Rik lincRNA lincRNA MGP_129S1SvImJ_T0000258.1 MGP_129S1SvImJ_G0000200.1 mouse_genomes_project 12 116203168 116203580 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0099338.1 MGP_129S1SvImJ_G0037405.1 mouse_genomes_project 12 99980398 99980461 + Gm25486 snRNA snRNA MGP_129S1SvImJ_T0006483.1 MGP_129S1SvImJ_G0005404.1 mouse_genomes_project 12 109775485 109790166 - 4930465M20Rik lincRNA lincRNA MGP_129S1SvImJ_T0006484.1 MGP_129S1SvImJ_G0005404.1 mouse_genomes_project 12 109782064 109790174 - 4930465M20Rik lincRNA lincRNA MGP_129S1SvImJ_T0035088.1 MGP_129S1SvImJ_G0019832.1 mouse_genomes_project 12 72914757 72917555 - Six1 protein_coding processed_transcript MGP_129S1SvImJ_T0035089.1 MGP_129S1SvImJ_G0019832.1 mouse_genomes_project 12 72916566 72921964 - MGP_129S1SvImJ_P0035089 Six1 protein_coding protein_coding MGP_129S1SvImJ_T0035090.1 MGP_129S1SvImJ_G0019832.1 mouse_genomes_project 12 72918273 72930081 - Six1 protein_coding processed_transcript MGP_129S1SvImJ_T0035091.1 MGP_129S1SvImJ_G0019832.1 mouse_genomes_project 12 72918516 72920077 - Six1 protein_coding processed_transcript MGP_129S1SvImJ_T0035113.1 MGP_129S1SvImJ_G0019841.1 mouse_genomes_project 12 73910684 73934057 + MGP_129S1SvImJ_P0035113 Snapc1 protein_coding protein_coding MGP_129S1SvImJ_T0035546.1 MGP_129S1SvImJ_G0019977.1 mouse_genomes_project 12 87989253 87994251 - MGP_129S1SvImJ_P0035546 Ngb protein_coding protein_coding MGP_129S1SvImJ_T0035547.1 MGP_129S1SvImJ_G0019977.1 mouse_genomes_project 12 87989253 87994234 - MGP_129S1SvImJ_P0035547 Ngb protein_coding protein_coding MGP_129S1SvImJ_T0035548.1 MGP_129S1SvImJ_G0019977.1 mouse_genomes_project 12 87989747 87994062 - MGP_129S1SvImJ_P0035548 Ngb protein_coding protein_coding MGP_129S1SvImJ_T0009846.1 MGP_129S1SvImJ_G0007962.1 mouse_genomes_project 12 111814405 111814466 - Mir3544 miRNA miRNA MGP_129S1SvImJ_T0012859.1 MGP_129S1SvImJ_G0010948.1 mouse_genomes_project 12 109451378 109451667 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0035193.1 MGP_129S1SvImJ_G0019870.1 mouse_genomes_project 12 78466532 78946861 + MGP_129S1SvImJ_P0035193 Gphn protein_coding protein_coding MGP_129S1SvImJ_T0035194.1 MGP_129S1SvImJ_G0019870.1 mouse_genomes_project 12 78466532 78946861 + MGP_129S1SvImJ_P0035194 Gphn protein_coding protein_coding MGP_129S1SvImJ_T0035195.1 MGP_129S1SvImJ_G0019870.1 mouse_genomes_project 12 78466655 78946860 + MGP_129S1SvImJ_P0035195 Gphn protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034475.1 MGP_129S1SvImJ_G0019611.1 mouse_genomes_project 12 14062032 14152987 - MGP_129S1SvImJ_P0034475 Greb1 protein_coding protein_coding MGP_129S1SvImJ_T0034476.1 MGP_129S1SvImJ_G0019611.1 mouse_genomes_project 12 14062032 14199902 - MGP_129S1SvImJ_P0034476 Greb1 protein_coding protein_coding MGP_129S1SvImJ_T0034477.1 MGP_129S1SvImJ_G0019611.1 mouse_genomes_project 12 14063495 14152941 - MGP_129S1SvImJ_P0034477 Greb1 protein_coding protein_coding MGP_129S1SvImJ_T0034478.1 MGP_129S1SvImJ_G0019611.1 mouse_genomes_project 12 14065237 14066469 - Greb1 protein_coding retained_intron MGP_129S1SvImJ_T0034479.1 MGP_129S1SvImJ_G0019611.1 mouse_genomes_project 12 14074800 14082777 - Greb1 protein_coding retained_intron MGP_129S1SvImJ_T0034480.1 MGP_129S1SvImJ_G0019611.1 mouse_genomes_project 12 14082505 14136026 - Greb1 protein_coding retained_intron MGP_129S1SvImJ_T0034481.1 MGP_129S1SvImJ_G0019611.1 mouse_genomes_project 12 14095308 14102277 - Greb1 protein_coding retained_intron MGP_129S1SvImJ_T0034482.1 MGP_129S1SvImJ_G0019611.1 mouse_genomes_project 12 14100394 14102688 - Greb1 protein_coding retained_intron MGP_129S1SvImJ_T0034483.1 MGP_129S1SvImJ_G0019611.1 mouse_genomes_project 12 14100405 14102828 - MGP_129S1SvImJ_P0034483 Greb1 protein_coding protein_coding MGP_129S1SvImJ_T0034484.1 MGP_129S1SvImJ_G0019611.1 mouse_genomes_project 12 14102139 14106014 - MGP_129S1SvImJ_P0034484 Greb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034485.1 MGP_129S1SvImJ_G0019611.1 mouse_genomes_project 12 14117438 14135924 - Greb1 protein_coding retained_intron MGP_129S1SvImJ_T0034486.1 MGP_129S1SvImJ_G0019611.1 mouse_genomes_project 12 14129069 14200102 - MGP_129S1SvImJ_P0034486 Greb1 protein_coding protein_coding MGP_129S1SvImJ_T0000064.1 MGP_129S1SvImJ_G0000051.1 mouse_genomes_project 12 116483521 116484040 - MGP_129S1SvImJ_P0000064 Ighv7-1 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0009897.1 MGP_129S1SvImJ_G0008013.1 mouse_genomes_project 12 111982070 111982136 + Mir154 miRNA miRNA MGP_129S1SvImJ_T0034640.1 MGP_129S1SvImJ_G0019664.1 mouse_genomes_project 12 29605638 29620404 - MGP_129S1SvImJ_P0034640 Dus4l protein_coding protein_coding MGP_129S1SvImJ_T0034930.1 MGP_129S1SvImJ_G0019773.1 mouse_genomes_project 12 62097707 62098130 + MGP_129S1SvImJ_P0034930 Spanxn4 protein_coding protein_coding MGP_129S1SvImJ_T0035428.1 MGP_129S1SvImJ_G0019945.1 mouse_genomes_project 12 85512227 85514047 + MGP_129S1SvImJ_P0035428 Isca2 protein_coding protein_coding MGP_129S1SvImJ_T0009879.1 MGP_129S1SvImJ_G0007995.1 mouse_genomes_project 12 111963653 111963745 + Mir667 miRNA miRNA MGP_129S1SvImJ_T0034345.1 MGP_129S1SvImJ_G0019559.1 mouse_genomes_project 12 640909 679011 + Dnmt3a protein_coding retained_intron MGP_129S1SvImJ_T0034346.1 MGP_129S1SvImJ_G0019559.1 mouse_genomes_project 12 641400 708748 + Dnmt3a protein_coding retained_intron MGP_129S1SvImJ_T0034347.1 MGP_129S1SvImJ_G0019559.1 mouse_genomes_project 12 643123 714632 + MGP_129S1SvImJ_P0034347 Dnmt3a protein_coding protein_coding MGP_129S1SvImJ_T0034348.1 MGP_129S1SvImJ_G0019559.1 mouse_genomes_project 12 643654 737967 + MGP_129S1SvImJ_P0034348 Dnmt3a protein_coding protein_coding MGP_129S1SvImJ_T0034349.1 MGP_129S1SvImJ_G0019559.1 mouse_genomes_project 12 643674 750158 + MGP_129S1SvImJ_P0034349 Dnmt3a protein_coding protein_coding MGP_129S1SvImJ_T0034350.1 MGP_129S1SvImJ_G0019559.1 mouse_genomes_project 12 689459 750298 + MGP_129S1SvImJ_P0034350 Dnmt3a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034351.1 MGP_129S1SvImJ_G0019559.1 mouse_genomes_project 12 702138 707414 + MGP_129S1SvImJ_P0034351 Dnmt3a protein_coding protein_coding MGP_129S1SvImJ_T0034352.1 MGP_129S1SvImJ_G0019559.1 mouse_genomes_project 12 707442 717299 + MGP_129S1SvImJ_P0034352 Dnmt3a protein_coding protein_coding MGP_129S1SvImJ_T0034353.1 MGP_129S1SvImJ_G0019559.1 mouse_genomes_project 12 726433 737093 + MGP_129S1SvImJ_P0034353 Dnmt3a protein_coding protein_coding MGP_129S1SvImJ_T0034354.1 MGP_129S1SvImJ_G0019559.1 mouse_genomes_project 12 732702 750253 + MGP_129S1SvImJ_P0034354 Dnmt3a protein_coding protein_coding MGP_129S1SvImJ_T0034355.1 MGP_129S1SvImJ_G0019559.1 mouse_genomes_project 12 735795 736648 + MGP_129S1SvImJ_P0034355 Dnmt3a protein_coding protein_coding MGP_129S1SvImJ_T0034356.1 MGP_129S1SvImJ_G0019559.1 mouse_genomes_project 12 735840 737948 + MGP_129S1SvImJ_P0034356 Dnmt3a protein_coding protein_coding MGP_129S1SvImJ_T0034357.1 MGP_129S1SvImJ_G0019559.1 mouse_genomes_project 12 736564 738337 + MGP_129S1SvImJ_P0034357 Dnmt3a protein_coding protein_coding MGP_129S1SvImJ_T0034358.1 MGP_129S1SvImJ_G0019559.1 mouse_genomes_project 12 738391 742439 + Dnmt3a protein_coding retained_intron MGP_129S1SvImJ_T0034359.1 MGP_129S1SvImJ_G0019559.1 mouse_genomes_project 12 743034 749204 + MGP_129S1SvImJ_P0034359 Dnmt3a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034360.1 MGP_129S1SvImJ_G0019559.1 mouse_genomes_project 12 749227 750957 + MGP_129S1SvImJ_P0034360 Dnmt3a protein_coding protein_coding MGP_129S1SvImJ_T0100549.1 MGP_129S1SvImJ_G0038616.1 mouse_genomes_project 12 10416139 10416274 - Gm24208 snoRNA snoRNA MGP_129S1SvImJ_T0006481.1 MGP_129S1SvImJ_G0005402.1 mouse_genomes_project 12 109164922 109178815 - Gm16084 lincRNA lincRNA MGP_129S1SvImJ_T0035565.1 MGP_129S1SvImJ_G0019986.1 mouse_genomes_project 12 88208343 88295571 - MGP_129S1SvImJ_P0035565 Sptlc2 protein_coding protein_coding MGP_129S1SvImJ_T0035566.1 MGP_129S1SvImJ_G0019986.1 mouse_genomes_project 12 88211223 88248516 - Sptlc2 protein_coding retained_intron MGP_129S1SvImJ_T0035567.1 MGP_129S1SvImJ_G0019986.1 mouse_genomes_project 12 88212792 88231849 - Sptlc2 protein_coding processed_transcript MGP_129S1SvImJ_T0035568.1 MGP_129S1SvImJ_G0019986.1 mouse_genomes_project 12 88251125 88255045 - Sptlc2 protein_coding retained_intron MGP_129S1SvImJ_T0035569.1 MGP_129S1SvImJ_G0019986.1 mouse_genomes_project 12 88251401 88295457 - Sptlc2 protein_coding processed_transcript MGP_129S1SvImJ_T0006485.1 MGP_129S1SvImJ_G0005405.1 mouse_genomes_project 12 109800543 109842679 - Gm15208 lincRNA lincRNA MGP_129S1SvImJ_T0009878.1 MGP_129S1SvImJ_G0007994.1 mouse_genomes_project 12 111962401 111962464 + Mir495 miRNA miRNA MGP_129S1SvImJ_T0006435.1 MGP_129S1SvImJ_G0005364.1 mouse_genomes_project 12 69969282 69978374 + F730035M05Rik lincRNA lincRNA MGP_129S1SvImJ_T0035903.1 MGP_129S1SvImJ_G0020100.1 mouse_genomes_project 12 110169652 110261402 - MGP_129S1SvImJ_P0035903 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035904.1 MGP_129S1SvImJ_G0020100.1 mouse_genomes_project 12 110188666 110261438 - MGP_129S1SvImJ_P0035904 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035905.1 MGP_129S1SvImJ_G0020100.1 mouse_genomes_project 12 110194355 110197309 - protein_coding processed_transcript MGP_129S1SvImJ_T0035906.1 MGP_129S1SvImJ_G0020100.1 mouse_genomes_project 12 110199000 110261318 - MGP_129S1SvImJ_P0035906 protein_coding protein_coding MGP_129S1SvImJ_T0035907.1 MGP_129S1SvImJ_G0020100.1 mouse_genomes_project 12 110199259 110261365 - MGP_129S1SvImJ_P0035907 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035908.1 MGP_129S1SvImJ_G0020100.1 mouse_genomes_project 12 110200520 110245112 - protein_coding processed_transcript MGP_129S1SvImJ_T0035909.1 MGP_129S1SvImJ_G0020100.1 mouse_genomes_project 12 110240086 110261315 - MGP_129S1SvImJ_P0035909 protein_coding protein_coding MGP_129S1SvImJ_T0000129.1 MGP_129S1SvImJ_G0000100.1 mouse_genomes_project 12 118841983 118842416 - MGP_129S1SvImJ_P0000129 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000132.1 MGP_129S1SvImJ_G0000100.1 mouse_genomes_project 12 118841983 118842277 - MGP_129S1SvImJ_P0000132 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000095.1 MGP_129S1SvImJ_G0000074.1 mouse_genomes_project 12 117135463 117135897 - MGP_129S1SvImJ_P0000095 Ighv1-4 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000274.1 MGP_129S1SvImJ_G0000216.1 mouse_genomes_project 12 117201735 117202028 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0000119.1 MGP_129S1SvImJ_G0000092.1 mouse_genomes_project 12 118764868 118765162 - MGP_129S1SvImJ_P0000119 Ighv1-67 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000120.1 MGP_129S1SvImJ_G0000092.1 mouse_genomes_project 12 118764868 118765298 - MGP_129S1SvImJ_P0000120 Ighv1-67 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0035645.1 MGP_129S1SvImJ_G0020005.1 mouse_genomes_project 12 99812454 99957295 - MGP_129S1SvImJ_P0035645 Kcnk10 protein_coding protein_coding MGP_129S1SvImJ_T0009843.1 MGP_129S1SvImJ_G0007959.1 mouse_genomes_project 12 111800590 111800681 + Mir673 miRNA miRNA MGP_129S1SvImJ_T0035250.1 MGP_129S1SvImJ_G0019897.1 mouse_genomes_project 12 81452534 81633782 + MGP_129S1SvImJ_P0035250 Smoc1 protein_coding protein_coding MGP_129S1SvImJ_T0035251.1 MGP_129S1SvImJ_G0019897.1 mouse_genomes_project 12 81452554 81633778 + MGP_129S1SvImJ_P0035251 Smoc1 protein_coding protein_coding MGP_129S1SvImJ_T0035252.1 MGP_129S1SvImJ_G0019897.1 mouse_genomes_project 12 81452554 81633778 + MGP_129S1SvImJ_P0035252 Smoc1 protein_coding protein_coding MGP_129S1SvImJ_T0003417.1 MGP_129S1SvImJ_G0003137.1 mouse_genomes_project 12 55818179 55821234 - Gm15524 antisense antisense MGP_129S1SvImJ_T0003432.1 MGP_129S1SvImJ_G0003150.1 mouse_genomes_project 12 83649670 83692543 - Gm29530 antisense antisense MGP_129S1SvImJ_T0009858.1 MGP_129S1SvImJ_G0007974.1 mouse_genomes_project 12 111841490 111841586 + Mir341 miRNA miRNA MGP_129S1SvImJ_T0098734.1 MGP_129S1SvImJ_G0036819.1 mouse_genomes_project 12 29840634 29840769 + Gm25913 scaRNA scaRNA MGP_129S1SvImJ_T0006414.1 MGP_129S1SvImJ_G0005348.1 mouse_genomes_project 12 18977260 18978949 + Gm4419 lincRNA lincRNA MGP_129S1SvImJ_T0036116.1 MGP_129S1SvImJ_G0020171.1 mouse_genomes_project 12 115592923 115633257 + MGP_129S1SvImJ_P0036116 Mta1 protein_coding protein_coding MGP_129S1SvImJ_T0036117.1 MGP_129S1SvImJ_G0020171.1 mouse_genomes_project 12 115592923 115633257 + MGP_129S1SvImJ_P0036117 Mta1 protein_coding protein_coding MGP_129S1SvImJ_T0036118.1 MGP_129S1SvImJ_G0020171.1 mouse_genomes_project 12 115592923 115633256 + MGP_129S1SvImJ_P0036118 Mta1 protein_coding protein_coding MGP_129S1SvImJ_T0036119.1 MGP_129S1SvImJ_G0020171.1 mouse_genomes_project 12 115592923 115633257 + MGP_129S1SvImJ_P0036119 Mta1 protein_coding protein_coding MGP_129S1SvImJ_T0036120.1 MGP_129S1SvImJ_G0020171.1 mouse_genomes_project 12 115608277 115633224 + MGP_129S1SvImJ_P0036120 Mta1 protein_coding protein_coding MGP_129S1SvImJ_T0036121.1 MGP_129S1SvImJ_G0020171.1 mouse_genomes_project 12 115608342 115632720 + Mta1 protein_coding processed_transcript MGP_129S1SvImJ_T0036122.1 MGP_129S1SvImJ_G0020171.1 mouse_genomes_project 12 115627382 115629431 + Mta1 protein_coding processed_transcript MGP_129S1SvImJ_T0036123.1 MGP_129S1SvImJ_G0020171.1 mouse_genomes_project 12 115627598 115629389 + Mta1 protein_coding processed_transcript MGP_129S1SvImJ_T0034784.1 MGP_129S1SvImJ_G0019717.1 mouse_genomes_project 12 48107305 48108956 + Foxg1 protein_coding processed_transcript MGP_129S1SvImJ_T0034785.1 MGP_129S1SvImJ_G0019717.1 mouse_genomes_project 12 48107445 48108245 + Foxg1 protein_coding processed_transcript MGP_129S1SvImJ_T0034786.1 MGP_129S1SvImJ_G0019717.1 mouse_genomes_project 12 48107528 48111447 + MGP_129S1SvImJ_P0034786 Foxg1 protein_coding protein_coding MGP_129S1SvImJ_T0034787.1 MGP_129S1SvImJ_G0019717.1 mouse_genomes_project 12 48107651 48111453 + MGP_129S1SvImJ_P0034787 Foxg1 protein_coding protein_coding MGP_129S1SvImJ_T0009881.1 MGP_129S1SvImJ_G0007997.1 mouse_genomes_project 12 111966863 111966947 + Mir654 miRNA miRNA MGP_129S1SvImJ_T0099301.1 MGP_129S1SvImJ_G0037368.1 mouse_genomes_project 12 9919627 9919734 + Gm25538 snRNA snRNA MGP_129S1SvImJ_T0009800.1 MGP_129S1SvImJ_G0007916.1 mouse_genomes_project 12 33367039 33367126 - Mir680-3 miRNA miRNA MGP_129S1SvImJ_T0035857.1 MGP_129S1SvImJ_G0020083.1 mouse_genomes_project 12 106864742 106872961 + MGP_129S1SvImJ_P0035857 Glrx5 protein_coding protein_coding MGP_129S1SvImJ_T0035226.1 MGP_129S1SvImJ_G0019888.1 mouse_genomes_project 12 80821828 80860663 + MGP_129S1SvImJ_P0035226 Exd2 protein_coding protein_coding MGP_129S1SvImJ_T0100592.1 MGP_129S1SvImJ_G0038659.1 mouse_genomes_project 12 108172558 108172690 + Gm24986 snoRNA snoRNA MGP_129S1SvImJ_T0000295.1 MGP_129S1SvImJ_G0000237.1 mouse_genomes_project 12 118841983 118842416 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0034761.1 MGP_129S1SvImJ_G0019707.1 mouse_genomes_project 12 39475712 40461675 + MGP_129S1SvImJ_P0034761 Immp2l protein_coding protein_coding MGP_129S1SvImJ_T0034762.1 MGP_129S1SvImJ_G0019707.1 mouse_genomes_project 12 39475748 39521839 + Immp2l protein_coding retained_intron MGP_129S1SvImJ_T0034763.1 MGP_129S1SvImJ_G0019707.1 mouse_genomes_project 12 39475749 39570089 + Immp2l protein_coding retained_intron MGP_129S1SvImJ_T0034764.1 MGP_129S1SvImJ_G0019707.1 mouse_genomes_project 12 39475951 40461329 + MGP_129S1SvImJ_P0034764 Immp2l protein_coding protein_coding MGP_129S1SvImJ_T0034765.1 MGP_129S1SvImJ_G0019707.1 mouse_genomes_project 12 39521265 39570075 + MGP_129S1SvImJ_P0034765 Immp2l protein_coding protein_coding MGP_129S1SvImJ_T0009812.1 MGP_129S1SvImJ_G0007928.1 mouse_genomes_project 12 69049255 69049325 - miRNA miRNA MGP_129S1SvImJ_T0035050.1 MGP_129S1SvImJ_G0019821.1 mouse_genomes_project 12 71885792 71901567 - MGP_129S1SvImJ_P0035050 L3hypdh protein_coding protein_coding MGP_129S1SvImJ_T0035051.1 MGP_129S1SvImJ_G0019821.1 mouse_genomes_project 12 71888862 71901567 - L3hypdh protein_coding retained_intron MGP_129S1SvImJ_T0035052.1 MGP_129S1SvImJ_G0019821.1 mouse_genomes_project 12 71889630 71901146 - L3hypdh protein_coding processed_transcript MGP_129S1SvImJ_T0100562.1 MGP_129S1SvImJ_G0038629.1 mouse_genomes_project 12 38005899 38006031 + Gm24434 snoRNA snoRNA MGP_129S1SvImJ_T0034840.1 MGP_129S1SvImJ_G0019745.1 mouse_genomes_project 12 54210374 54221905 + MGP_129S1SvImJ_P0034840 protein_coding protein_coding MGP_129S1SvImJ_T0035463.1 MGP_129S1SvImJ_G0019955.1 mouse_genomes_project 12 85985263 85992403 + MGP_129S1SvImJ_P0035463 Eif2b2 protein_coding protein_coding MGP_129S1SvImJ_T0035464.1 MGP_129S1SvImJ_G0019955.1 mouse_genomes_project 12 85985286 85988614 + MGP_129S1SvImJ_P0035464 Eif2b2 protein_coding protein_coding MGP_129S1SvImJ_T0035465.1 MGP_129S1SvImJ_G0019955.1 mouse_genomes_project 12 85985295 85991925 + MGP_129S1SvImJ_P0035465 Eif2b2 protein_coding protein_coding MGP_129S1SvImJ_T0035466.1 MGP_129S1SvImJ_G0019955.1 mouse_genomes_project 12 85985297 85985732 + Eif2b2 protein_coding retained_intron MGP_129S1SvImJ_T0035467.1 MGP_129S1SvImJ_G0019955.1 mouse_genomes_project 12 85985328 85988601 + Eif2b2 protein_coding retained_intron MGP_129S1SvImJ_T0035468.1 MGP_129S1SvImJ_G0019955.1 mouse_genomes_project 12 85985364 85989263 + Eif2b2 protein_coding retained_intron MGP_129S1SvImJ_T0035469.1 MGP_129S1SvImJ_G0019955.1 mouse_genomes_project 12 85990300 85992268 + Eif2b2 protein_coding retained_intron MGP_129S1SvImJ_T0034457.1 MGP_129S1SvImJ_G0019598.1 mouse_genomes_project 12 8430618 8457261 - MGP_129S1SvImJ_P0034457 Gen1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035476.1 MGP_129S1SvImJ_G0019958.1 mouse_genomes_project 12 86058731 86069499 + MGP_129S1SvImJ_P0035476 Zc2hc1c protein_coding protein_coding MGP_129S1SvImJ_T0035777.1 MGP_129S1SvImJ_G0020045.1 mouse_genomes_project 12 104989702 104995792 + MGP_129S1SvImJ_P0035777 Fam181a protein_coding protein_coding MGP_129S1SvImJ_T0035778.1 MGP_129S1SvImJ_G0020045.1 mouse_genomes_project 12 104993680 104995046 + MGP_129S1SvImJ_P0035778 Fam181a protein_coding protein_coding MGP_129S1SvImJ_T0035779.1 MGP_129S1SvImJ_G0020045.1 mouse_genomes_project 12 104993686 104995792 + MGP_129S1SvImJ_P0035779 Fam181a protein_coding protein_coding MGP_129S1SvImJ_T0006430.1 MGP_129S1SvImJ_G0005359.1 mouse_genomes_project 12 48205563 48209435 - 1810007C17Rik lincRNA lincRNA MGP_129S1SvImJ_T0034965.1 MGP_129S1SvImJ_G0019790.1 mouse_genomes_project 12 68861303 68863961 + MGP_129S1SvImJ_P0034965 9330151L19Rik protein_coding protein_coding MGP_129S1SvImJ_T0000281.1 MGP_129S1SvImJ_G0000223.1 mouse_genomes_project 12 117668821 117669256 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0000293.1 MGP_129S1SvImJ_G0000235.1 mouse_genomes_project 12 118781661 118782094 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0035280.1 MGP_129S1SvImJ_G0019904.1 mouse_genomes_project 12 82030909 82040803 - MGP_129S1SvImJ_P0035280 Adam21 protein_coding protein_coding MGP_129S1SvImJ_T0009804.1 MGP_129S1SvImJ_G0007920.1 mouse_genomes_project 12 38635105 38635205 - Mir1938 miRNA miRNA MGP_129S1SvImJ_T0034936.1 MGP_129S1SvImJ_G0019778.1 mouse_genomes_project 12 64515692 64542741 + MGP_129S1SvImJ_P0034936 Prpf39 protein_coding protein_coding MGP_129S1SvImJ_T0034937.1 MGP_129S1SvImJ_G0019778.1 mouse_genomes_project 12 64515725 64542741 + MGP_129S1SvImJ_P0034937 Prpf39 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0098462.1 MGP_129S1SvImJ_G0036547.1 mouse_genomes_project 12 2785387 2785502 + Gm23752 rRNA rRNA MGP_129S1SvImJ_T0012857.1 MGP_129S1SvImJ_G0010946.1 mouse_genomes_project 12 108888333 108888814 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034470.1 MGP_129S1SvImJ_G0019608.1 mouse_genomes_project 12 13136613 13163088 - MGP_129S1SvImJ_P0034470 Trib2 protein_coding protein_coding MGP_129S1SvImJ_T0034471.1 MGP_129S1SvImJ_G0019608.1 mouse_genomes_project 12 13162185 13163180 - Trib2 protein_coding processed_transcript MGP_129S1SvImJ_T0009793.1 MGP_129S1SvImJ_G0007909.1 mouse_genomes_project 12 13145890 13145998 - Mir6387 miRNA miRNA MGP_129S1SvImJ_T0036173.1 MGP_129S1SvImJ_G0020187.1 mouse_genomes_project 12 121202036 121274516 - MGP_129S1SvImJ_P0036173 Sp4 protein_coding protein_coding MGP_129S1SvImJ_T0034590.1 MGP_129S1SvImJ_G0019649.1 mouse_genomes_project 12 27826662 27905627 + MGP_129S1SvImJ_P0034590 Pxdn protein_coding protein_coding MGP_129S1SvImJ_T0034591.1 MGP_129S1SvImJ_G0019649.1 mouse_genomes_project 12 27826676 27876877 + Pxdn protein_coding retained_intron MGP_129S1SvImJ_T0034592.1 MGP_129S1SvImJ_G0019649.1 mouse_genomes_project 12 27826676 27876325 + MGP_129S1SvImJ_P0034592 Pxdn protein_coding protein_coding MGP_129S1SvImJ_T0034593.1 MGP_129S1SvImJ_G0019649.1 mouse_genomes_project 12 27883747 27889630 + Pxdn protein_coding processed_transcript MGP_129S1SvImJ_T0034594.1 MGP_129S1SvImJ_G0019649.1 mouse_genomes_project 12 27883753 27887081 + Pxdn protein_coding retained_intron MGP_129S1SvImJ_T0034595.1 MGP_129S1SvImJ_G0019649.1 mouse_genomes_project 12 27887109 27889772 + Pxdn protein_coding retained_intron MGP_129S1SvImJ_T0099344.1 MGP_129S1SvImJ_G0037411.1 mouse_genomes_project 12 119343973 119344037 - Gm27649 snRNA snRNA MGP_129S1SvImJ_T0035512.1 MGP_129S1SvImJ_G0019967.1 mouse_genomes_project 12 86868200 86892376 - MGP_129S1SvImJ_P0035512 Tgfb3 protein_coding protein_coding MGP_129S1SvImJ_T0036129.1 MGP_129S1SvImJ_G0020173.1 mouse_genomes_project 12 115642358 115649897 + Crip1 protein_coding processed_transcript MGP_129S1SvImJ_T0036130.1 MGP_129S1SvImJ_G0020173.1 mouse_genomes_project 12 115642570 115649905 + MGP_129S1SvImJ_P0036130 Crip1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0036131.1 MGP_129S1SvImJ_G0020173.1 mouse_genomes_project 12 115644755 115649864 + MGP_129S1SvImJ_P0036131 Crip1 protein_coding protein_coding MGP_129S1SvImJ_T0036132.1 MGP_129S1SvImJ_G0020173.1 mouse_genomes_project 12 115648102 115649897 + Crip1 protein_coding retained_intron MGP_129S1SvImJ_T0036133.1 MGP_129S1SvImJ_G0020173.1 mouse_genomes_project 12 115648112 115649897 + Crip1 protein_coding retained_intron MGP_129S1SvImJ_T0011341.1 MGP_129S1SvImJ_G0009457.1 mouse_genomes_project 12 15105928 15106227 - Gm25925 misc_RNA misc_RNA MGP_129S1SvImJ_T0034708.1 MGP_129S1SvImJ_G0019691.1 mouse_genomes_project 12 34437131 34448283 - MGP_129S1SvImJ_P0034708 Lrrc72 protein_coding protein_coding MGP_129S1SvImJ_T0034709.1 MGP_129S1SvImJ_G0019691.1 mouse_genomes_project 12 34438347 34485425 - MGP_129S1SvImJ_P0034709 Lrrc72 protein_coding protein_coding MGP_129S1SvImJ_T0034710.1 MGP_129S1SvImJ_G0019691.1 mouse_genomes_project 12 34441067 34448299 - Lrrc72 protein_coding retained_intron MGP_129S1SvImJ_T0000887.1 MGP_129S1SvImJ_G0000820.1 mouse_genomes_project 12 83716116 83716918 - TEC TEC MGP_129S1SvImJ_T0034528.1 MGP_129S1SvImJ_G0019625.1 mouse_genomes_project 12 18877555 18928827 - MGP_129S1SvImJ_P0034528 Adam17 protein_coding protein_coding MGP_129S1SvImJ_T0034529.1 MGP_129S1SvImJ_G0019625.1 mouse_genomes_project 12 18877563 18928866 - MGP_129S1SvImJ_P0034529 Adam17 protein_coding protein_coding MGP_129S1SvImJ_T0034530.1 MGP_129S1SvImJ_G0019625.1 mouse_genomes_project 12 18877563 18928827 - MGP_129S1SvImJ_P0034530 Adam17 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034531.1 MGP_129S1SvImJ_G0019625.1 mouse_genomes_project 12 18877563 18928827 - MGP_129S1SvImJ_P0034531 Adam17 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034532.1 MGP_129S1SvImJ_G0019625.1 mouse_genomes_project 12 18879571 18883359 - Adam17 protein_coding processed_transcript MGP_129S1SvImJ_T0034533.1 MGP_129S1SvImJ_G0019625.1 mouse_genomes_project 12 18882056 18899487 - Adam17 protein_coding retained_intron MGP_129S1SvImJ_T0034534.1 MGP_129S1SvImJ_G0019625.1 mouse_genomes_project 12 18884141 18886589 - Adam17 protein_coding retained_intron MGP_129S1SvImJ_T0034535.1 MGP_129S1SvImJ_G0019625.1 mouse_genomes_project 12 18905147 18928768 - MGP_129S1SvImJ_P0034535 Adam17 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035128.1 MGP_129S1SvImJ_G0019850.1 mouse_genomes_project 12 75755127 75779667 - MGP_129S1SvImJ_P0035128 Sgpp1 protein_coding protein_coding MGP_129S1SvImJ_T0009891.1 MGP_129S1SvImJ_G0008007.1 mouse_genomes_project 12 111972970 111973048 + Mir544 miRNA miRNA MGP_129S1SvImJ_T0102175.1 MGP_129S1SvImJ_G0040009.1 mouse_genomes_project 12 105598840 105612985 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0009888.1 MGP_129S1SvImJ_G0008004.1 mouse_genomes_project 12 111971753 111971868 - Gm44322 miRNA miRNA MGP_129S1SvImJ_T0000284.1 MGP_129S1SvImJ_G0000226.1 mouse_genomes_project 12 117717794 117718228 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0006502.1 MGP_129S1SvImJ_G0005412.1 mouse_genomes_project 12 111936921 111943923 + B830012L14Rik lincRNA lincRNA MGP_129S1SvImJ_T0034825.1 MGP_129S1SvImJ_G0019740.1 mouse_genomes_project 12 53846916 53851573 - Baz1a protein_coding retained_intron MGP_129S1SvImJ_T0034826.1 MGP_129S1SvImJ_G0019740.1 mouse_genomes_project 12 53849406 53943152 - MGP_129S1SvImJ_P0034826 Baz1a protein_coding protein_coding MGP_129S1SvImJ_T0034827.1 MGP_129S1SvImJ_G0019740.1 mouse_genomes_project 12 53849968 53943323 - MGP_129S1SvImJ_P0034827 Baz1a protein_coding protein_coding MGP_129S1SvImJ_T0034828.1 MGP_129S1SvImJ_G0019740.1 mouse_genomes_project 12 53880159 53887407 - MGP_129S1SvImJ_P0034828 Baz1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034829.1 MGP_129S1SvImJ_G0019740.1 mouse_genomes_project 12 53897424 53900948 - MGP_129S1SvImJ_P0034829 Baz1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034830.1 MGP_129S1SvImJ_G0019740.1 mouse_genomes_project 12 53911412 53971154 - MGP_129S1SvImJ_P0034830 Baz1a protein_coding protein_coding MGP_129S1SvImJ_T0034831.1 MGP_129S1SvImJ_G0019740.1 mouse_genomes_project 12 53931582 53942752 - MGP_129S1SvImJ_P0034831 Baz1a protein_coding protein_coding MGP_129S1SvImJ_T0034832.1 MGP_129S1SvImJ_G0019740.1 mouse_genomes_project 12 53931597 53955913 - MGP_129S1SvImJ_P0034832 Baz1a protein_coding protein_coding MGP_129S1SvImJ_T0035472.1 MGP_129S1SvImJ_G0019957.1 mouse_genomes_project 12 86040865 86048897 - MGP_129S1SvImJ_P0035472 Acyp1 protein_coding protein_coding MGP_129S1SvImJ_T0035473.1 MGP_129S1SvImJ_G0019957.1 mouse_genomes_project 12 86040876 86048768 - MGP_129S1SvImJ_P0035473 Acyp1 protein_coding protein_coding MGP_129S1SvImJ_T0035474.1 MGP_129S1SvImJ_G0019957.1 mouse_genomes_project 12 86041014 86057256 - MGP_129S1SvImJ_P0035474 Acyp1 protein_coding protein_coding MGP_129S1SvImJ_T0035475.1 MGP_129S1SvImJ_G0019957.1 mouse_genomes_project 12 86047354 86048880 - MGP_129S1SvImJ_P0035475 Acyp1 protein_coding protein_coding MGP_129S1SvImJ_T0012840.1 MGP_129S1SvImJ_G0010929.1 mouse_genomes_project 12 87576867 87577326 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034646.1 MGP_129S1SvImJ_G0019667.1 mouse_genomes_project 12 29910677 29936183 - MGP_129S1SvImJ_P0034646 Hbp1 protein_coding protein_coding MGP_129S1SvImJ_T0034647.1 MGP_129S1SvImJ_G0019667.1 mouse_genomes_project 12 29912857 29929642 - MGP_129S1SvImJ_P0034647 Hbp1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034648.1 MGP_129S1SvImJ_G0019667.1 mouse_genomes_project 12 29913803 29935871 - MGP_129S1SvImJ_P0034648 Hbp1 protein_coding protein_coding MGP_129S1SvImJ_T0034649.1 MGP_129S1SvImJ_G0019667.1 mouse_genomes_project 12 29915228 29926052 - MGP_129S1SvImJ_P0034649 Hbp1 protein_coding protein_coding MGP_129S1SvImJ_T0034650.1 MGP_129S1SvImJ_G0019667.1 mouse_genomes_project 12 29915339 29919219 - Hbp1 protein_coding retained_intron MGP_129S1SvImJ_T0034651.1 MGP_129S1SvImJ_G0019667.1 mouse_genomes_project 12 29917248 29935256 - MGP_129S1SvImJ_P0034651 Hbp1 protein_coding protein_coding MGP_129S1SvImJ_T0034652.1 MGP_129S1SvImJ_G0019667.1 mouse_genomes_project 12 29918757 29935818 - MGP_129S1SvImJ_P0034652 Hbp1 protein_coding protein_coding MGP_129S1SvImJ_T0034653.1 MGP_129S1SvImJ_G0019667.1 mouse_genomes_project 12 29920875 29935869 - MGP_129S1SvImJ_P0034653 Hbp1 protein_coding protein_coding MGP_129S1SvImJ_T0034654.1 MGP_129S1SvImJ_G0019667.1 mouse_genomes_project 12 29921461 29935858 - MGP_129S1SvImJ_P0034654 Hbp1 protein_coding protein_coding MGP_129S1SvImJ_T0034655.1 MGP_129S1SvImJ_G0019667.1 mouse_genomes_project 12 29925395 29935882 - Hbp1 protein_coding retained_intron MGP_129S1SvImJ_T0100586.1 MGP_129S1SvImJ_G0038653.1 mouse_genomes_project 12 88355244 88355380 - Mir3068 snoRNA snoRNA MGP_129S1SvImJ_T0035666.1 MGP_129S1SvImJ_G0020011.1 mouse_genomes_project 12 100596981 100803956 - MGP_129S1SvImJ_P0035666 Foxn3 protein_coding protein_coding MGP_129S1SvImJ_T0035667.1 MGP_129S1SvImJ_G0020011.1 mouse_genomes_project 12 100597095 100803231 - MGP_129S1SvImJ_P0035667 Foxn3 protein_coding protein_coding MGP_129S1SvImJ_T0035668.1 MGP_129S1SvImJ_G0020011.1 mouse_genomes_project 12 100597095 100868664 - MGP_129S1SvImJ_P0035668 Foxn3 protein_coding protein_coding MGP_129S1SvImJ_T0035669.1 MGP_129S1SvImJ_G0020011.1 mouse_genomes_project 12 100598793 100695470 - MGP_129S1SvImJ_P0035669 Foxn3 protein_coding protein_coding MGP_129S1SvImJ_T0035670.1 MGP_129S1SvImJ_G0020011.1 mouse_genomes_project 12 100613295 100695469 - MGP_129S1SvImJ_P0035670 Foxn3 protein_coding protein_coding MGP_129S1SvImJ_T0035671.1 MGP_129S1SvImJ_G0020011.1 mouse_genomes_project 12 100695455 100762353 - Foxn3 protein_coding processed_transcript MGP_129S1SvImJ_T0035672.1 MGP_129S1SvImJ_G0020011.1 mouse_genomes_project 12 100745832 100824696 - MGP_129S1SvImJ_P0035672 Foxn3 protein_coding protein_coding MGP_129S1SvImJ_T0035673.1 MGP_129S1SvImJ_G0020011.1 mouse_genomes_project 12 100797550 100868687 - Foxn3 protein_coding retained_intron MGP_129S1SvImJ_T0035674.1 MGP_129S1SvImJ_G0020011.1 mouse_genomes_project 12 100798584 100868701 - MGP_129S1SvImJ_P0035674 Foxn3 protein_coding protein_coding MGP_129S1SvImJ_T0102174.1 MGP_129S1SvImJ_G0040008.1 mouse_genomes_project 12 105561139 105612985 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099330.1 MGP_129S1SvImJ_G0037397.1 mouse_genomes_project 12 77630130 77630290 + Gm25926 snRNA snRNA MGP_129S1SvImJ_T0000023.1 MGP_129S1SvImJ_G0000017.1 mouse_genomes_project 12 115990723 115990734 - MGP_129S1SvImJ_P0000023 Ighd4-1 IG_D_gene IG_D_gene MGP_129S1SvImJ_T0099340.1 MGP_129S1SvImJ_G0037407.1 mouse_genomes_project 12 102772456 102772550 - Gm22749 snRNA snRNA MGP_129S1SvImJ_T0034957.1 MGP_129S1SvImJ_G0019785.1 mouse_genomes_project 12 68818775 68820236 - MGP_129S1SvImJ_P0034957 Rps29 protein_coding protein_coding MGP_129S1SvImJ_T0034958.1 MGP_129S1SvImJ_G0019785.1 mouse_genomes_project 12 68819411 68820104 - Rps29 protein_coding retained_intron MGP_129S1SvImJ_T0034596.1 MGP_129S1SvImJ_G0019650.1 mouse_genomes_project 12 27947011 28019430 - MGP_129S1SvImJ_P0034596 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034597.1 MGP_129S1SvImJ_G0019650.1 mouse_genomes_project 12 27977875 27980749 - protein_coding retained_intron MGP_129S1SvImJ_T0034598.1 MGP_129S1SvImJ_G0019650.1 mouse_genomes_project 12 28001892 28017087 - MGP_129S1SvImJ_P0034598 protein_coding protein_coding MGP_129S1SvImJ_T0000014.1 MGP_129S1SvImJ_G0000010.1 mouse_genomes_project 12 115977154 115981330 - MGP_129S1SvImJ_P0000014 Ighm IG_C_gene IG_C_gene MGP_129S1SvImJ_T0000015.1 MGP_129S1SvImJ_G0000010.1 mouse_genomes_project 12 115979341 115981330 - MGP_129S1SvImJ_P0000015 Ighm IG_C_gene IG_C_gene MGP_129S1SvImJ_T0036143.1 MGP_129S1SvImJ_G0000010.1 mouse_genomes_project 12 115977152 115981256 - MGP_129S1SvImJ_P0036143 Ighm IG_C_gene unknown_likely_coding MGP_129S1SvImJ_T0034698.1 MGP_129S1SvImJ_G0019685.1 mouse_genomes_project 12 34130340 34154625 + MGP_129S1SvImJ_P0034698 Agr3 protein_coding protein_coding MGP_129S1SvImJ_T0034699.1 MGP_129S1SvImJ_G0019685.1 mouse_genomes_project 12 34130342 34133087 + MGP_129S1SvImJ_P0034699 Agr3 protein_coding protein_coding MGP_129S1SvImJ_T0006463.1 MGP_129S1SvImJ_G0005388.1 mouse_genomes_project 12 101677098 101677925 - Gm26723 lincRNA lincRNA MGP_129S1SvImJ_T0034310.1 MGP_129S1SvImJ_G0019555.1 mouse_genomes_project 12 19781 86705 - MGP_129S1SvImJ_P0034310 Rab10 protein_coding protein_coding MGP_129S1SvImJ_T0100587.1 MGP_129S1SvImJ_G0038654.1 mouse_genomes_project 12 91943612 91943741 + Gm23195 snoRNA snoRNA MGP_129S1SvImJ_T0012860.1 MGP_129S1SvImJ_G0010949.1 mouse_genomes_project 12 109659568 109660414 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0035823.1 MGP_129S1SvImJ_G0020063.1 mouse_genomes_project 12 105728041 105739187 - MGP_129S1SvImJ_P0035823 Serpina11 protein_coding protein_coding MGP_129S1SvImJ_T0035824.1 MGP_129S1SvImJ_G0020063.1 mouse_genomes_project 12 105728053 105739157 - MGP_129S1SvImJ_P0035824 Serpina11 protein_coding protein_coding MGP_129S1SvImJ_T0035825.1 MGP_129S1SvImJ_G0020063.1 mouse_genomes_project 12 105732476 105739149 - MGP_129S1SvImJ_P0035825 Serpina11 protein_coding protein_coding MGP_129S1SvImJ_T0035826.1 MGP_129S1SvImJ_G0020063.1 mouse_genomes_project 12 105732562 105739147 - MGP_129S1SvImJ_P0035826 Serpina11 protein_coding protein_coding MGP_129S1SvImJ_T0035827.1 MGP_129S1SvImJ_G0020063.1 mouse_genomes_project 12 105733701 105739171 - Serpina11 protein_coding processed_transcript MGP_129S1SvImJ_T0006431.1 MGP_129S1SvImJ_G0005360.1 mouse_genomes_project 12 50711750 50713197 + Gm26517 lincRNA lincRNA MGP_129S1SvImJ_T0000286.1 MGP_129S1SvImJ_G0000228.1 mouse_genomes_project 12 118144886 118420338 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0035314.1 MGP_129S1SvImJ_G0019912.1 mouse_genomes_project 12 83817652 83964578 - MGP_129S1SvImJ_P0035314 Dpf3 protein_coding protein_coding MGP_129S1SvImJ_T0035315.1 MGP_129S1SvImJ_G0019912.1 mouse_genomes_project 12 83817658 84118668 - MGP_129S1SvImJ_P0035315 Dpf3 protein_coding protein_coding MGP_129S1SvImJ_T0035316.1 MGP_129S1SvImJ_G0019912.1 mouse_genomes_project 12 83867931 83905819 - MGP_129S1SvImJ_P0035316 Dpf3 protein_coding protein_coding MGP_129S1SvImJ_T0035317.1 MGP_129S1SvImJ_G0019912.1 mouse_genomes_project 12 83871717 84118660 - MGP_129S1SvImJ_P0035317 Dpf3 protein_coding protein_coding MGP_129S1SvImJ_T0035318.1 MGP_129S1SvImJ_G0019912.1 mouse_genomes_project 12 83876636 84118660 - MGP_129S1SvImJ_P0035318 Dpf3 protein_coding protein_coding MGP_129S1SvImJ_T0035319.1 MGP_129S1SvImJ_G0019912.1 mouse_genomes_project 12 83876753 84066214 - MGP_129S1SvImJ_P0035319 Dpf3 protein_coding protein_coding MGP_129S1SvImJ_T0009809.1 MGP_129S1SvImJ_G0007925.1 mouse_genomes_project 12 68820486 68820565 + miRNA miRNA MGP_129S1SvImJ_T0000890.1 MGP_129S1SvImJ_G0000823.1 mouse_genomes_project 12 86882507 86883114 + TEC TEC MGP_129S1SvImJ_T0035844.1 MGP_129S1SvImJ_G0020072.1 mouse_genomes_project 12 106027687 106033883 + MGP_129S1SvImJ_P0035844 protein_coding protein_coding MGP_129S1SvImJ_T0035845.1 MGP_129S1SvImJ_G0020072.1 mouse_genomes_project 12 106027722 106030262 + protein_coding retained_intron MGP_129S1SvImJ_T0035792.1 MGP_129S1SvImJ_G0020050.1 mouse_genomes_project 12 105113431 105119662 + MGP_129S1SvImJ_P0035792 Ifi27 protein_coding protein_coding MGP_129S1SvImJ_T0035793.1 MGP_129S1SvImJ_G0020050.1 mouse_genomes_project 12 105113431 105119662 + MGP_129S1SvImJ_P0035793 Ifi27 protein_coding protein_coding MGP_129S1SvImJ_T0035794.1 MGP_129S1SvImJ_G0020050.1 mouse_genomes_project 12 105113431 105119662 + MGP_129S1SvImJ_P0035794 Ifi27 protein_coding protein_coding MGP_129S1SvImJ_T0035795.1 MGP_129S1SvImJ_G0020050.1 mouse_genomes_project 12 105113432 105119694 + MGP_129S1SvImJ_P0035795 Ifi27 protein_coding protein_coding MGP_129S1SvImJ_T0035796.1 MGP_129S1SvImJ_G0020050.1 mouse_genomes_project 12 105113465 105117091 + Ifi27 protein_coding retained_intron MGP_129S1SvImJ_T0035797.1 MGP_129S1SvImJ_G0020050.1 mouse_genomes_project 12 105113479 105119694 + MGP_129S1SvImJ_P0035797 Ifi27 protein_coding protein_coding MGP_129S1SvImJ_T0035798.1 MGP_129S1SvImJ_G0020050.1 mouse_genomes_project 12 105113505 105116428 + Ifi27 protein_coding retained_intron MGP_129S1SvImJ_T0035799.1 MGP_129S1SvImJ_G0020050.1 mouse_genomes_project 12 105113512 105116983 + MGP_129S1SvImJ_P0035799 Ifi27 protein_coding protein_coding MGP_129S1SvImJ_T0035800.1 MGP_129S1SvImJ_G0020050.1 mouse_genomes_project 12 105117081 105119694 + Ifi27 protein_coding retained_intron MGP_129S1SvImJ_T0009884.1 MGP_129S1SvImJ_G0008000.1 mouse_genomes_project 12 111967426 111967494 + Mir376a miRNA miRNA MGP_129S1SvImJ_T0009911.1 MGP_129S1SvImJ_G0008027.1 mouse_genomes_project 12 114564346 114564422 + Mir203 miRNA miRNA MGP_129S1SvImJ_T0012852.1 MGP_129S1SvImJ_G0010941.1 mouse_genomes_project 12 105335825 105336489 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034311.1 MGP_129S1SvImJ_G0019556.1 mouse_genomes_project 12 157055 200109 + MGP_129S1SvImJ_P0034311 Kif3c protein_coding protein_coding MGP_129S1SvImJ_T0035199.1 MGP_129S1SvImJ_G0019874.1 mouse_genomes_project 12 79137983 79163159 + MGP_129S1SvImJ_P0035199 Eif2s1 protein_coding protein_coding MGP_129S1SvImJ_T0035818.1 MGP_129S1SvImJ_G0020058.1 mouse_genomes_project 12 105443450 105457855 - MGP_129S1SvImJ_P0035818 protein_coding protein_coding MGP_129S1SvImJ_T0035061.1 MGP_129S1SvImJ_G0019824.1 mouse_genomes_project 12 72030799 72054771 - Rtn1 protein_coding processed_transcript MGP_129S1SvImJ_T0035062.1 MGP_129S1SvImJ_G0019824.1 mouse_genomes_project 12 72030799 72238674 - MGP_129S1SvImJ_P0035062 Rtn1 protein_coding protein_coding MGP_129S1SvImJ_T0035063.1 MGP_129S1SvImJ_G0019824.1 mouse_genomes_project 12 72030800 72055756 - MGP_129S1SvImJ_P0035063 Rtn1 protein_coding protein_coding MGP_129S1SvImJ_T0035064.1 MGP_129S1SvImJ_G0019824.1 mouse_genomes_project 12 72031339 72055756 - MGP_129S1SvImJ_P0035064 Rtn1 protein_coding protein_coding MGP_129S1SvImJ_T0035065.1 MGP_129S1SvImJ_G0019824.1 mouse_genomes_project 12 72042357 72055718 - Rtn1 protein_coding processed_transcript MGP_129S1SvImJ_T0035619.1 MGP_129S1SvImJ_G0019998.1 mouse_genomes_project 12 92528192 92646942 + MGP_129S1SvImJ_P0035619 Tshr protein_coding protein_coding MGP_129S1SvImJ_T0035620.1 MGP_129S1SvImJ_G0019998.1 mouse_genomes_project 12 92528198 92628958 + MGP_129S1SvImJ_P0035620 Tshr protein_coding protein_coding MGP_129S1SvImJ_T0035621.1 MGP_129S1SvImJ_G0019998.1 mouse_genomes_project 12 92644498 92645989 + MGP_129S1SvImJ_P0035621 Tshr protein_coding protein_coding MGP_129S1SvImJ_T0035815.1 MGP_129S1SvImJ_G0020057.1 mouse_genomes_project 12 105383335 105389948 - MGP_129S1SvImJ_P0035815 Serpina1f protein_coding protein_coding MGP_129S1SvImJ_T0035816.1 MGP_129S1SvImJ_G0020057.1 mouse_genomes_project 12 105384925 105390818 - MGP_129S1SvImJ_P0035816 Serpina1f protein_coding protein_coding MGP_129S1SvImJ_T0035817.1 MGP_129S1SvImJ_G0020057.1 mouse_genomes_project 12 105384928 105389998 - MGP_129S1SvImJ_P0035817 Serpina1f protein_coding protein_coding MGP_129S1SvImJ_T0036104.1 MGP_129S1SvImJ_G0020163.1 mouse_genomes_project 12 115326594 115339047 - MGP_129S1SvImJ_P0036104 Gpr132 protein_coding protein_coding MGP_129S1SvImJ_T0099341.1 MGP_129S1SvImJ_G0037408.1 mouse_genomes_project 12 111023253 111023359 - Gm22079 snRNA snRNA MGP_129S1SvImJ_T0011357.1 MGP_129S1SvImJ_G0009473.1 mouse_genomes_project 12 104802382 104802544 + Gm27976 misc_RNA misc_RNA MGP_129S1SvImJ_T0034541.1 MGP_129S1SvImJ_G0019628.1 mouse_genomes_project 12 22160026 22236992 + MGP_129S1SvImJ_P0034541 Taf1b protein_coding protein_coding MGP_129S1SvImJ_T0011358.1 MGP_129S1SvImJ_G0009474.1 mouse_genomes_project 12 111755457 111755662 + Gm27528 misc_RNA misc_RNA MGP_129S1SvImJ_T0009855.1 MGP_129S1SvImJ_G0007971.1 mouse_genomes_project 12 111824913 111824988 + Mir432 miRNA miRNA MGP_129S1SvImJ_T0035623.1 MGP_129S1SvImJ_G0020000.1 mouse_genomes_project 12 92751390 92915187 - MGP_129S1SvImJ_P0035623 Ston2 protein_coding protein_coding MGP_129S1SvImJ_T0035624.1 MGP_129S1SvImJ_G0020000.1 mouse_genomes_project 12 92754197 92871238 - MGP_129S1SvImJ_P0035624 Ston2 protein_coding protein_coding MGP_129S1SvImJ_T0035625.1 MGP_129S1SvImJ_G0020000.1 mouse_genomes_project 12 92830257 92840737 - Ston2 protein_coding processed_transcript MGP_129S1SvImJ_T0035626.1 MGP_129S1SvImJ_G0020000.1 mouse_genomes_project 12 92840844 92907879 - MGP_129S1SvImJ_P0035626 Ston2 protein_coding protein_coding MGP_129S1SvImJ_T0035627.1 MGP_129S1SvImJ_G0020000.1 mouse_genomes_project 12 92862464 92899938 - Ston2 protein_coding processed_transcript MGP_129S1SvImJ_T0035628.1 MGP_129S1SvImJ_G0020000.1 mouse_genomes_project 12 92871000 92873470 - MGP_129S1SvImJ_P0035628 Ston2 protein_coding protein_coding MGP_129S1SvImJ_T0035629.1 MGP_129S1SvImJ_G0020000.1 mouse_genomes_project 12 92914551 92917138 - Ston2 protein_coding processed_transcript MGP_129S1SvImJ_T0035470.1 MGP_129S1SvImJ_G0019956.1 mouse_genomes_project 12 86000295 86039059 - MGP_129S1SvImJ_P0035470 Mlh3 protein_coding protein_coding MGP_129S1SvImJ_T0035471.1 MGP_129S1SvImJ_G0019956.1 mouse_genomes_project 12 86000295 86039032 - MGP_129S1SvImJ_P0035471 Mlh3 protein_coding protein_coding MGP_129S1SvImJ_T0034841.1 MGP_129S1SvImJ_G0019746.1 mouse_genomes_project 12 54300022 54340143 - MGP_129S1SvImJ_P0034841 Ppp2r3c protein_coding protein_coding MGP_129S1SvImJ_T0034842.1 MGP_129S1SvImJ_G0019746.1 mouse_genomes_project 12 54315439 54340120 - MGP_129S1SvImJ_P0034842 Ppp2r3c protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035847.1 MGP_129S1SvImJ_G0020074.1 mouse_genomes_project 12 106109680 106117337 + MGP_129S1SvImJ_P0035847 Serpina3k protein_coding protein_coding MGP_129S1SvImJ_T0000888.1 MGP_129S1SvImJ_G0000821.1 mouse_genomes_project 12 83717015 83717957 + TEC TEC MGP_129S1SvImJ_T0035864.1 MGP_129S1SvImJ_G0020089.1 mouse_genomes_project 12 107079622 107085610 - MGP_129S1SvImJ_P0035864 Tcl1 protein_coding protein_coding MGP_129S1SvImJ_T0035865.1 MGP_129S1SvImJ_G0020089.1 mouse_genomes_project 12 107079630 107085589 - MGP_129S1SvImJ_P0035865 Tcl1 protein_coding protein_coding MGP_129S1SvImJ_T0035866.1 MGP_129S1SvImJ_G0020089.1 mouse_genomes_project 12 107080180 107085579 - MGP_129S1SvImJ_P0035866 Tcl1 protein_coding protein_coding MGP_129S1SvImJ_T0035867.1 MGP_129S1SvImJ_G0020089.1 mouse_genomes_project 12 107080370 107085666 - MGP_129S1SvImJ_P0035867 Tcl1 protein_coding protein_coding MGP_129S1SvImJ_T0035868.1 MGP_129S1SvImJ_G0020089.1 mouse_genomes_project 12 107080466 107085569 - MGP_129S1SvImJ_P0035868 Tcl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035869.1 MGP_129S1SvImJ_G0020089.1 mouse_genomes_project 12 107081162 107085498 - Tcl1 protein_coding processed_transcript MGP_129S1SvImJ_T0034788.1 MGP_129S1SvImJ_G0019718.1 mouse_genomes_project 12 48109765 48118616 + MGP_129S1SvImJ_P0034788 Gm43517 protein_coding protein_coding MGP_129S1SvImJ_T0035695.1 MGP_129S1SvImJ_G0020019.1 mouse_genomes_project 12 102021617 102211018 - MGP_129S1SvImJ_P0035695 Rps6ka5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035696.1 MGP_129S1SvImJ_G0020019.1 mouse_genomes_project 12 102022960 102211166 - MGP_129S1SvImJ_P0035696 Rps6ka5 protein_coding protein_coding MGP_129S1SvImJ_T0098469.1 MGP_129S1SvImJ_G0036554.1 mouse_genomes_project 12 51892340 51892459 - n-R5s58 rRNA rRNA MGP_129S1SvImJ_T0034656.1 MGP_129S1SvImJ_G0019668.1 mouse_genomes_project 12 29944096 30041490 - MGP_129S1SvImJ_P0034656 Prkar2b protein_coding protein_coding MGP_129S1SvImJ_T0036156.1 MGP_129S1SvImJ_G0020180.1 mouse_genomes_project 12 119068775 119121669 - MGP_129S1SvImJ_P0036156 Wdr60 protein_coding protein_coding MGP_129S1SvImJ_T0034947.1 MGP_129S1SvImJ_G0019783.1 mouse_genomes_project 12 65805733 65806739 - MGP_129S1SvImJ_P0034947 Rpl10l protein_coding protein_coding MGP_129S1SvImJ_T0017365.1 MGP_129S1SvImJ_G0015242.1 mouse_genomes_project 12 114131590 114132326 + Gm15995 processed_transcript processed_transcript MGP_129S1SvImJ_T0036074.1 MGP_129S1SvImJ_G0020150.1 mouse_genomes_project 12 114856772 114869821 - MGP_129S1SvImJ_P0036074 A730018C14Rik protein_coding protein_coding MGP_129S1SvImJ_T0011351.1 MGP_129S1SvImJ_G0009467.1 mouse_genomes_project 12 71524850 71525152 + Gm22959 misc_RNA misc_RNA MGP_129S1SvImJ_T0006445.1 MGP_129S1SvImJ_G0005370.1 mouse_genomes_project 12 80459672 80472792 - 2310015A10Rik lincRNA lincRNA MGP_129S1SvImJ_T0011345.1 MGP_129S1SvImJ_G0009461.1 mouse_genomes_project 12 55369796 55370081 - Gm24685 misc_RNA misc_RNA MGP_129S1SvImJ_T0000294.1 MGP_129S1SvImJ_G0000236.1 mouse_genomes_project 12 118781662 118782094 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0099320.1 MGP_129S1SvImJ_G0037387.1 mouse_genomes_project 12 61290493 61290597 + Gm24750 snRNA snRNA MGP_129S1SvImJ_T0009876.1 MGP_129S1SvImJ_G0007992.1 mouse_genomes_project 12 111960732 111960831 + Mir666 miRNA miRNA MGP_129S1SvImJ_T0035358.1 MGP_129S1SvImJ_G0019921.1 mouse_genomes_project 12 84621068 84653023 - MGP_129S1SvImJ_P0035358 Heatr4 protein_coding protein_coding MGP_129S1SvImJ_T0012845.1 MGP_129S1SvImJ_G0010934.1 mouse_genomes_project 12 97319644 97319998 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034721.1 MGP_129S1SvImJ_G0019697.1 mouse_genomes_project 12 36158156 36948438 + MGP_129S1SvImJ_P0034721 Dgkb protein_coding protein_coding MGP_129S1SvImJ_T0034722.1 MGP_129S1SvImJ_G0019697.1 mouse_genomes_project 12 36265385 36949274 + MGP_129S1SvImJ_P0034722 Dgkb protein_coding unknown_likely_coding MGP_129S1SvImJ_T0102172.1 MGP_129S1SvImJ_G0040006.1 mouse_genomes_project 12 105425425 105429917 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0034814.1 MGP_129S1SvImJ_G0019733.1 mouse_genomes_project 12 51541189 52005671 + MGP_129S1SvImJ_P0034814 Akap6 protein_coding protein_coding MGP_129S1SvImJ_T0003410.1 MGP_129S1SvImJ_G0003132.1 mouse_genomes_project 12 38442641 38444570 + Arl4aos antisense antisense MGP_129S1SvImJ_T0036077.1 MGP_129S1SvImJ_G0020153.1 mouse_genomes_project 12 115045800 115072119 + MGP_129S1SvImJ_P0036077 Inf2 protein_coding protein_coding MGP_129S1SvImJ_T0036078.1 MGP_129S1SvImJ_G0020153.1 mouse_genomes_project 12 115045832 115069166 + MGP_129S1SvImJ_P0036078 Inf2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034817.1 MGP_129S1SvImJ_G0019735.1 mouse_genomes_project 12 53071411 53099621 - MGP_129S1SvImJ_P0034817 Egln3 protein_coding protein_coding MGP_129S1SvImJ_T0035092.1 MGP_129S1SvImJ_G0019833.1 mouse_genomes_project 12 72974618 72988430 - MGP_129S1SvImJ_P0035092 Six4 protein_coding protein_coding MGP_129S1SvImJ_T0035093.1 MGP_129S1SvImJ_G0019833.1 mouse_genomes_project 12 72978453 72988461 - MGP_129S1SvImJ_P0035093 Six4 protein_coding protein_coding MGP_129S1SvImJ_T0012866.1 MGP_129S1SvImJ_G0010955.1 mouse_genomes_project 12 116798246 116798558 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0035380.1 MGP_129S1SvImJ_G0019931.1 mouse_genomes_project 12 84980648 85016967 + MGP_129S1SvImJ_P0035380 Ptgr2 protein_coding protein_coding MGP_129S1SvImJ_T0035381.1 MGP_129S1SvImJ_G0019931.1 mouse_genomes_project 12 84980781 85005240 + Ptgr2 protein_coding retained_intron MGP_129S1SvImJ_T0035382.1 MGP_129S1SvImJ_G0019931.1 mouse_genomes_project 12 84980790 85011170 + MGP_129S1SvImJ_P0035382 Ptgr2 protein_coding protein_coding MGP_129S1SvImJ_T0035383.1 MGP_129S1SvImJ_G0019931.1 mouse_genomes_project 12 84980797 84999583 + Ptgr2 protein_coding retained_intron MGP_129S1SvImJ_T0035384.1 MGP_129S1SvImJ_G0019931.1 mouse_genomes_project 12 84980800 85009649 + Ptgr2 protein_coding processed_transcript MGP_129S1SvImJ_T0035385.1 MGP_129S1SvImJ_G0019931.1 mouse_genomes_project 12 84980815 85007296 + Ptgr2 protein_coding processed_transcript MGP_129S1SvImJ_T0035386.1 MGP_129S1SvImJ_G0019931.1 mouse_genomes_project 12 84980816 85015237 + MGP_129S1SvImJ_P0035386 Ptgr2 protein_coding protein_coding MGP_129S1SvImJ_T0035387.1 MGP_129S1SvImJ_G0019931.1 mouse_genomes_project 12 84980822 85015989 + MGP_129S1SvImJ_P0035387 Ptgr2 protein_coding protein_coding MGP_129S1SvImJ_T0035388.1 MGP_129S1SvImJ_G0019931.1 mouse_genomes_project 12 84980829 85015237 + MGP_129S1SvImJ_P0035388 Ptgr2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0100571.1 MGP_129S1SvImJ_G0038638.1 mouse_genomes_project 12 58337905 58338027 + Gm24233 snoRNA snoRNA MGP_129S1SvImJ_T0034798.1 MGP_129S1SvImJ_G0019724.1 mouse_genomes_project 12 50392784 50405143 + MGP_129S1SvImJ_P0034798 Coch protein_coding protein_coding MGP_129S1SvImJ_T0034799.1 MGP_129S1SvImJ_G0019724.1 mouse_genomes_project 12 50392784 50405143 + MGP_129S1SvImJ_P0034799 Coch protein_coding protein_coding MGP_129S1SvImJ_T0017343.1 MGP_129S1SvImJ_G0015238.1 mouse_genomes_project 12 103517023 103519117 + Gm20036 processed_transcript processed_transcript MGP_129S1SvImJ_T0034781.1 MGP_129S1SvImJ_G0019714.1 mouse_genomes_project 12 45352717 45487129 - MGP_129S1SvImJ_P0034781 Nova1 protein_coding protein_coding MGP_129S1SvImJ_T0035210.1 MGP_129S1SvImJ_G0019881.1 mouse_genomes_project 12 79454521 79474836 - MGP_129S1SvImJ_P0035210 Rdh11 protein_coding protein_coding MGP_129S1SvImJ_T0035211.1 MGP_129S1SvImJ_G0019881.1 mouse_genomes_project 12 79455735 79473504 - MGP_129S1SvImJ_P0035211 Rdh11 protein_coding protein_coding MGP_129S1SvImJ_T0035212.1 MGP_129S1SvImJ_G0019881.1 mouse_genomes_project 12 79456349 79474336 - MGP_129S1SvImJ_P0035212 Rdh11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034562.1 MGP_129S1SvImJ_G0019634.1 mouse_genomes_project 12 22669520 22754003 + MGP_129S1SvImJ_P0034562 Kidins220 protein_coding protein_coding MGP_129S1SvImJ_T0034563.1 MGP_129S1SvImJ_G0019634.1 mouse_genomes_project 12 22669525 22757353 + MGP_129S1SvImJ_P0034563 Kidins220 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0000261.1 MGP_129S1SvImJ_G0000203.1 mouse_genomes_project 12 116461575 116461995 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0035417.1 MGP_129S1SvImJ_G0019938.1 mouse_genomes_project 12 85139991 85160834 - MGP_129S1SvImJ_P0035417 Aldh6a1 protein_coding protein_coding MGP_129S1SvImJ_T0012818.1 MGP_129S1SvImJ_G0010907.1 mouse_genomes_project 12 56449945 56450411 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000062.1 MGP_129S1SvImJ_G0000049.1 mouse_genomes_project 12 116447082 116447604 - MGP_129S1SvImJ_P0000062 Ighv5-17 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0012873.1 MGP_129S1SvImJ_G0010962.1 mouse_genomes_project 12 120768649 120768994 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098466.1 MGP_129S1SvImJ_G0036551.1 mouse_genomes_project 12 25873277 25873415 - Gm25923 rRNA rRNA MGP_129S1SvImJ_T0035790.1 MGP_129S1SvImJ_G0020049.1 mouse_genomes_project 12 105087185 105104990 - MGP_129S1SvImJ_P0035790 Ddx24 protein_coding protein_coding MGP_129S1SvImJ_T0035791.1 MGP_129S1SvImJ_G0020049.1 mouse_genomes_project 12 105087185 105105077 - MGP_129S1SvImJ_P0035791 Ddx24 protein_coding protein_coding MGP_129S1SvImJ_T0034565.1 MGP_129S1SvImJ_G0019636.1 mouse_genomes_project 12 24037587 24148042 - MGP_129S1SvImJ_P0034565 Rnf144a protein_coding protein_coding MGP_129S1SvImJ_T0034566.1 MGP_129S1SvImJ_G0019636.1 mouse_genomes_project 12 24037587 24148042 - MGP_129S1SvImJ_P0034566 Rnf144a protein_coding protein_coding MGP_129S1SvImJ_T0000035.1 MGP_129S1SvImJ_G0000029.1 mouse_genomes_project 12 115989280 115989328 - MGP_129S1SvImJ_P0000035 Ighj3 IG_J_gene IG_J_gene MGP_129S1SvImJ_T0009832.1 MGP_129S1SvImJ_G0007948.1 mouse_genomes_project 12 102518073 102518170 - Mir1190 miRNA miRNA MGP_129S1SvImJ_T0098461.1 MGP_129S1SvImJ_G0036546.1 mouse_genomes_project 12 1226314 1226428 + Gm23756 rRNA rRNA MGP_129S1SvImJ_T0009896.1 MGP_129S1SvImJ_G0008012.1 mouse_genomes_project 12 111979264 111979346 + Mir453 miRNA miRNA MGP_129S1SvImJ_T0034459.1 MGP_129S1SvImJ_G0019600.1 mouse_genomes_project 12 8520512 8643407 - MGP_129S1SvImJ_P0034459 Vsnl1 protein_coding protein_coding MGP_129S1SvImJ_T0100591.1 MGP_129S1SvImJ_G0038658.1 mouse_genomes_project 12 106214520 106214648 - Gm24334 snoRNA snoRNA MGP_129S1SvImJ_T0017341.1 MGP_129S1SvImJ_G0015237.1 mouse_genomes_project 12 101656091 101661657 + Gm10433 processed_transcript processed_transcript MGP_129S1SvImJ_T0017342.1 MGP_129S1SvImJ_G0015237.1 mouse_genomes_project 12 101656896 101660862 + Gm10433 processed_transcript processed_transcript MGP_129S1SvImJ_T0035124.1 MGP_129S1SvImJ_G0019847.1 mouse_genomes_project 12 75419106 75424162 - MGP_129S1SvImJ_P0035124 Gphb5 protein_coding protein_coding MGP_129S1SvImJ_T0012874.1 MGP_129S1SvImJ_G0010963.1 mouse_genomes_project 12 122995077 122995519 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034938.1 MGP_129S1SvImJ_G0019779.1 mouse_genomes_project 12 64541790 64557581 - MGP_129S1SvImJ_P0034938 Fkbp3 protein_coding protein_coding MGP_129S1SvImJ_T0100560.1 MGP_129S1SvImJ_G0038627.1 mouse_genomes_project 12 34606843 34606953 - Gm25438 snoRNA snoRNA MGP_129S1SvImJ_T0003427.1 MGP_129S1SvImJ_G0003145.1 mouse_genomes_project 12 81077106 81084017 - Plekhd1os antisense antisense MGP_129S1SvImJ_T0035862.1 MGP_129S1SvImJ_G0020087.1 mouse_genomes_project 12 107036584 107042077 + MGP_129S1SvImJ_P0035862 Tcl1b5 protein_coding protein_coding MGP_129S1SvImJ_T0017336.1 MGP_129S1SvImJ_G0015234.1 mouse_genomes_project 12 82003409 82029646 + 6530401F13Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0099334.1 MGP_129S1SvImJ_G0037401.1 mouse_genomes_project 12 81323057 81323164 + Gm23298 snRNA snRNA MGP_129S1SvImJ_T0035275.1 MGP_129S1SvImJ_G0019903.1 mouse_genomes_project 12 81957488 82003353 - MGP_129S1SvImJ_P0035275 protein_coding protein_coding MGP_129S1SvImJ_T0035276.1 MGP_129S1SvImJ_G0019903.1 mouse_genomes_project 12 81958413 82003341 - MGP_129S1SvImJ_P0035276 protein_coding protein_coding MGP_129S1SvImJ_T0035277.1 MGP_129S1SvImJ_G0019903.1 mouse_genomes_project 12 81969117 81974111 - protein_coding retained_intron MGP_129S1SvImJ_T0035278.1 MGP_129S1SvImJ_G0019903.1 mouse_genomes_project 12 81973269 81980579 - MGP_129S1SvImJ_P0035278 protein_coding protein_coding MGP_129S1SvImJ_T0035279.1 MGP_129S1SvImJ_G0019903.1 mouse_genomes_project 12 81973399 82003322 - MGP_129S1SvImJ_P0035279 protein_coding protein_coding MGP_129S1SvImJ_T0035675.1 MGP_129S1SvImJ_G0020012.1 mouse_genomes_project 12 101165276 101335789 - MGP_129S1SvImJ_P0035675 Efcab11 protein_coding protein_coding MGP_129S1SvImJ_T0035607.1 MGP_129S1SvImJ_G0019997.1 mouse_genomes_project 12 92130318 92511645 - MGP_129S1SvImJ_P0035607 Cep128 protein_coding protein_coding MGP_129S1SvImJ_T0035608.1 MGP_129S1SvImJ_G0019997.1 mouse_genomes_project 12 92130318 92383889 - MGP_129S1SvImJ_P0035608 Cep128 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035609.1 MGP_129S1SvImJ_G0019997.1 mouse_genomes_project 12 92131166 92189935 - Cep128 protein_coding processed_transcript MGP_129S1SvImJ_T0035610.1 MGP_129S1SvImJ_G0019997.1 mouse_genomes_project 12 92131168 92162041 - Cep128 protein_coding processed_transcript MGP_129S1SvImJ_T0035611.1 MGP_129S1SvImJ_G0019997.1 mouse_genomes_project 12 92131391 92301237 - Cep128 protein_coding processed_transcript MGP_129S1SvImJ_T0035612.1 MGP_129S1SvImJ_G0019997.1 mouse_genomes_project 12 92153388 92301290 - Cep128 protein_coding processed_transcript MGP_129S1SvImJ_T0035613.1 MGP_129S1SvImJ_G0019997.1 mouse_genomes_project 12 92334723 92376994 - MGP_129S1SvImJ_P0035613 Cep128 protein_coding protein_coding MGP_129S1SvImJ_T0035614.1 MGP_129S1SvImJ_G0019997.1 mouse_genomes_project 12 92405439 92511645 - Cep128 protein_coding retained_intron MGP_129S1SvImJ_T0035615.1 MGP_129S1SvImJ_G0019997.1 mouse_genomes_project 12 92439201 92453786 - Cep128 protein_coding processed_transcript MGP_129S1SvImJ_T0035616.1 MGP_129S1SvImJ_G0019997.1 mouse_genomes_project 12 92460366 92511595 - Cep128 protein_coding retained_intron MGP_129S1SvImJ_T0035617.1 MGP_129S1SvImJ_G0019997.1 mouse_genomes_project 12 92462188 92511645 - Cep128 protein_coding processed_transcript MGP_129S1SvImJ_T0035618.1 MGP_129S1SvImJ_G0019997.1 mouse_genomes_project 12 92489187 92511589 - Cep128 protein_coding retained_intron MGP_129S1SvImJ_T0098821.1 MGP_129S1SvImJ_G0036903.1 mouse_genomes_project 12 55712241 55716193 + C87198 sense_intronic sense_intronic MGP_129S1SvImJ_T0098822.1 MGP_129S1SvImJ_G0036903.1 mouse_genomes_project 12 55712251 55715721 + C87198 sense_intronic sense_intronic MGP_129S1SvImJ_T0006404.1 MGP_129S1SvImJ_G0005339.1 mouse_genomes_project 12 2307552 2352498 + 2810032G03Rik lincRNA lincRNA MGP_129S1SvImJ_T0006405.1 MGP_129S1SvImJ_G0005339.1 mouse_genomes_project 12 2347829 2352824 + 2810032G03Rik lincRNA lincRNA MGP_129S1SvImJ_T0012842.1 MGP_129S1SvImJ_G0010931.1 mouse_genomes_project 12 92585642 92586432 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009849.1 MGP_129S1SvImJ_G0007965.1 mouse_genomes_project 12 111816535 111816624 + Mir3070a miRNA miRNA MGP_129S1SvImJ_T0000067.1 MGP_129S1SvImJ_G0000053.1 mouse_genomes_project 12 116532740 116533254 - MGP_129S1SvImJ_P0000067 Ighv4-1 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0034964.1 MGP_129S1SvImJ_G0019789.1 mouse_genomes_project 12 68851545 68862522 - MGP_129S1SvImJ_P0034964 Dnaaf2 protein_coding protein_coding MGP_129S1SvImJ_T0035423.1 MGP_129S1SvImJ_G0019942.1 mouse_genomes_project 12 85366478 85378128 + MGP_129S1SvImJ_P0035423 Vrtn protein_coding protein_coding MGP_129S1SvImJ_T0035424.1 MGP_129S1SvImJ_G0019942.1 mouse_genomes_project 12 85368014 85378128 + MGP_129S1SvImJ_P0035424 Vrtn protein_coding protein_coding MGP_129S1SvImJ_T0035425.1 MGP_129S1SvImJ_G0019942.1 mouse_genomes_project 12 85368355 85378128 + MGP_129S1SvImJ_P0035425 Vrtn protein_coding protein_coding MGP_129S1SvImJ_T0034736.1 MGP_129S1SvImJ_G0019699.1 mouse_genomes_project 12 38410163 38441910 - MGP_129S1SvImJ_P0034736 Arl4a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034737.1 MGP_129S1SvImJ_G0019699.1 mouse_genomes_project 12 38410163 38441919 - MGP_129S1SvImJ_P0034737 Arl4a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034738.1 MGP_129S1SvImJ_G0019699.1 mouse_genomes_project 12 38414194 38419052 - Arl4a protein_coding processed_transcript MGP_129S1SvImJ_T0034739.1 MGP_129S1SvImJ_G0019699.1 mouse_genomes_project 12 38437833 38441972 - MGP_129S1SvImJ_P0034739 Arl4a protein_coding protein_coding MGP_129S1SvImJ_T0034740.1 MGP_129S1SvImJ_G0019699.1 mouse_genomes_project 12 38440364 38442568 - MGP_129S1SvImJ_P0034740 Arl4a protein_coding protein_coding MGP_129S1SvImJ_T0035914.1 MGP_129S1SvImJ_G0020104.1 mouse_genomes_project 12 110445860 110474302 + MGP_129S1SvImJ_P0035914 Cyp46a1 protein_coding protein_coding MGP_129S1SvImJ_T0036006.1 MGP_129S1SvImJ_G0020129.1 mouse_genomes_project 12 113642797 113649491 + MGP_129S1SvImJ_P0036006 Amn protein_coding protein_coding MGP_129S1SvImJ_T0011352.1 MGP_129S1SvImJ_G0009468.1 mouse_genomes_project 12 76826003 76826285 + Gm24010 misc_RNA misc_RNA MGP_129S1SvImJ_T0000089.1 MGP_129S1SvImJ_G0000068.1 mouse_genomes_project 12 116978951 116979385 - MGP_129S1SvImJ_P0000089 Ighv12-3 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0012810.1 MGP_129S1SvImJ_G0010899.1 mouse_genomes_project 12 47882845 47883856 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000011.1 MGP_129S1SvImJ_G0000008.1 mouse_genomes_project 12 115916961 115918619 - MGP_129S1SvImJ_P0000011 Ighg3 IG_C_gene IG_C_gene MGP_129S1SvImJ_T0100603.1 MGP_129S1SvImJ_G0038670.1 mouse_genomes_project 12 111890391 111890463 + DQ267102 snoRNA snoRNA MGP_129S1SvImJ_T0100596.1 MGP_129S1SvImJ_G0038663.1 mouse_genomes_project 12 111875068 111875141 + Gm24899 snoRNA snoRNA MGP_129S1SvImJ_T0035930.1 MGP_129S1SvImJ_G0020109.1 mouse_genomes_project 12 110983954 110993965 - MGP_129S1SvImJ_P0035930 Slc25a29 protein_coding protein_coding MGP_129S1SvImJ_T0035931.1 MGP_129S1SvImJ_G0020109.1 mouse_genomes_project 12 110985305 110989699 - Slc25a29 protein_coding retained_intron MGP_129S1SvImJ_T0035932.1 MGP_129S1SvImJ_G0020109.1 mouse_genomes_project 12 110989025 110993902 - Slc25a29 protein_coding retained_intron MGP_129S1SvImJ_T0034438.1 MGP_129S1SvImJ_G0019589.1 mouse_genomes_project 12 6006646 6023548 + MGP_129S1SvImJ_P0034438 Laptm4a protein_coding protein_coding MGP_129S1SvImJ_T0035992.1 MGP_129S1SvImJ_G0020125.1 mouse_genomes_project 12 113324923 113328611 - MGP_129S1SvImJ_P0035992 Ankrd9 protein_coding protein_coding MGP_129S1SvImJ_T0035993.1 MGP_129S1SvImJ_G0020125.1 mouse_genomes_project 12 113325996 113327826 - MGP_129S1SvImJ_P0035993 Ankrd9 protein_coding protein_coding MGP_129S1SvImJ_T0035994.1 MGP_129S1SvImJ_G0020125.1 mouse_genomes_project 12 113325997 113328514 - MGP_129S1SvImJ_P0035994 Ankrd9 protein_coding protein_coding MGP_129S1SvImJ_T0035995.1 MGP_129S1SvImJ_G0020125.1 mouse_genomes_project 12 113325997 113328592 - MGP_129S1SvImJ_P0035995 Ankrd9 protein_coding protein_coding MGP_129S1SvImJ_T0035996.1 MGP_129S1SvImJ_G0020125.1 mouse_genomes_project 12 113325997 113328189 - MGP_129S1SvImJ_P0035996 Ankrd9 protein_coding protein_coding MGP_129S1SvImJ_T0035997.1 MGP_129S1SvImJ_G0020125.1 mouse_genomes_project 12 113325999 113328566 - MGP_129S1SvImJ_P0035997 Ankrd9 protein_coding protein_coding MGP_129S1SvImJ_T0035998.1 MGP_129S1SvImJ_G0020125.1 mouse_genomes_project 12 113327542 113328150 - Ankrd9 protein_coding processed_transcript MGP_129S1SvImJ_T0102169.1 MGP_129S1SvImJ_G0040004.1 mouse_genomes_project 12 75662926 75671024 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102170.1 MGP_129S1SvImJ_G0040004.1 mouse_genomes_project 12 75663567 75671047 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0035076.1 MGP_129S1SvImJ_G0019828.1 mouse_genomes_project 12 72485504 72502864 - MGP_129S1SvImJ_P0035076 Dhrs7 protein_coding protein_coding MGP_129S1SvImJ_T0006410.1 MGP_129S1SvImJ_G0005344.1 mouse_genomes_project 12 8647193 8653766 + 4930511A02Rik lincRNA lincRNA MGP_129S1SvImJ_T0034419.1 MGP_129S1SvImJ_G0019587.1 mouse_genomes_project 12 5743529 5822585 + MGP_129S1SvImJ_P0034419 Pum2 protein_coding protein_coding MGP_129S1SvImJ_T0034420.1 MGP_129S1SvImJ_G0019587.1 mouse_genomes_project 12 5743529 5821458 + MGP_129S1SvImJ_P0034420 Pum2 protein_coding protein_coding MGP_129S1SvImJ_T0034421.1 MGP_129S1SvImJ_G0019587.1 mouse_genomes_project 12 5743540 5820324 + MGP_129S1SvImJ_P0034421 Pum2 protein_coding protein_coding MGP_129S1SvImJ_T0034422.1 MGP_129S1SvImJ_G0019587.1 mouse_genomes_project 12 5743619 5822565 + MGP_129S1SvImJ_P0034422 Pum2 protein_coding protein_coding MGP_129S1SvImJ_T0034423.1 MGP_129S1SvImJ_G0019587.1 mouse_genomes_project 12 5743654 5776773 + Pum2 protein_coding processed_transcript MGP_129S1SvImJ_T0034424.1 MGP_129S1SvImJ_G0019587.1 mouse_genomes_project 12 5743670 5822561 + MGP_129S1SvImJ_P0034424 Pum2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034425.1 MGP_129S1SvImJ_G0019587.1 mouse_genomes_project 12 5743816 5820005 + MGP_129S1SvImJ_P0034425 Pum2 protein_coding protein_coding MGP_129S1SvImJ_T0034426.1 MGP_129S1SvImJ_G0019587.1 mouse_genomes_project 12 5743865 5820032 + MGP_129S1SvImJ_P0034426 Pum2 protein_coding protein_coding MGP_129S1SvImJ_T0034427.1 MGP_129S1SvImJ_G0019587.1 mouse_genomes_project 12 5744076 5822585 + MGP_129S1SvImJ_P0034427 Pum2 protein_coding protein_coding MGP_129S1SvImJ_T0034428.1 MGP_129S1SvImJ_G0019587.1 mouse_genomes_project 12 5744131 5783035 + MGP_129S1SvImJ_P0034428 Pum2 protein_coding protein_coding MGP_129S1SvImJ_T0034429.1 MGP_129S1SvImJ_G0019587.1 mouse_genomes_project 12 5744160 5782804 + MGP_129S1SvImJ_P0034429 Pum2 protein_coding protein_coding MGP_129S1SvImJ_T0034430.1 MGP_129S1SvImJ_G0019587.1 mouse_genomes_project 12 5746929 5778895 + MGP_129S1SvImJ_P0034430 Pum2 protein_coding protein_coding MGP_129S1SvImJ_T0034431.1 MGP_129S1SvImJ_G0019587.1 mouse_genomes_project 12 5767426 5783318 + MGP_129S1SvImJ_P0034431 Pum2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034432.1 MGP_129S1SvImJ_G0019587.1 mouse_genomes_project 12 5779630 5791767 + MGP_129S1SvImJ_P0034432 Pum2 protein_coding protein_coding MGP_129S1SvImJ_T0034433.1 MGP_129S1SvImJ_G0019587.1 mouse_genomes_project 12 5799116 5818240 + MGP_129S1SvImJ_P0034433 Pum2 protein_coding protein_coding MGP_129S1SvImJ_T0034434.1 MGP_129S1SvImJ_G0019587.1 mouse_genomes_project 12 5813445 5814365 + Pum2 protein_coding retained_intron MGP_129S1SvImJ_T0003412.1 MGP_129S1SvImJ_G0003134.1 mouse_genomes_project 12 38622060 38623647 - Gm17024 antisense antisense MGP_129S1SvImJ_T0012825.1 MGP_129S1SvImJ_G0010914.1 mouse_genomes_project 12 62501022 62501319 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099331.1 MGP_129S1SvImJ_G0037398.1 mouse_genomes_project 12 79017318 79017420 - Gm25225 snRNA snRNA MGP_129S1SvImJ_T0012815.1 MGP_129S1SvImJ_G0010904.1 mouse_genomes_project 12 53919740 53920877 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009867.1 MGP_129S1SvImJ_G0007983.1 mouse_genomes_project 12 111955426 111955538 - Gm25750 miRNA miRNA MGP_129S1SvImJ_T0009865.1 MGP_129S1SvImJ_G0007981.1 mouse_genomes_project 12 111954285 111954348 + Mir299a miRNA miRNA MGP_129S1SvImJ_T0000009.1 MGP_129S1SvImJ_G0000007.1 mouse_genomes_project 12 115880565 115885851 - MGP_129S1SvImJ_P0000009 Ighg1 IG_C_gene IG_C_gene MGP_129S1SvImJ_T0000010.1 MGP_129S1SvImJ_G0000007.1 mouse_genomes_project 12 115884199 115885851 - MGP_129S1SvImJ_P0000010 Ighg1 IG_C_gene IG_C_gene MGP_129S1SvImJ_T0034631.1 MGP_129S1SvImJ_G0019661.1 mouse_genomes_project 12 29438232 29456208 - MGP_129S1SvImJ_P0034631 Cbll1 protein_coding protein_coding MGP_129S1SvImJ_T0034632.1 MGP_129S1SvImJ_G0019661.1 mouse_genomes_project 12 29438335 29456168 - MGP_129S1SvImJ_P0034632 Cbll1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034633.1 MGP_129S1SvImJ_G0019661.1 mouse_genomes_project 12 29438339 29456208 - MGP_129S1SvImJ_P0034633 Cbll1 protein_coding protein_coding MGP_129S1SvImJ_T0034634.1 MGP_129S1SvImJ_G0019661.1 mouse_genomes_project 12 29440682 29456208 - MGP_129S1SvImJ_P0034634 Cbll1 protein_coding protein_coding MGP_129S1SvImJ_T0034635.1 MGP_129S1SvImJ_G0019661.1 mouse_genomes_project 12 29441318 29456149 - MGP_129S1SvImJ_P0034635 Cbll1 protein_coding protein_coding MGP_129S1SvImJ_T0034636.1 MGP_129S1SvImJ_G0019661.1 mouse_genomes_project 12 29441328 29456147 - MGP_129S1SvImJ_P0034636 Cbll1 protein_coding protein_coding MGP_129S1SvImJ_T0035972.1 MGP_129S1SvImJ_G0020120.1 mouse_genomes_project 12 113010748 113015957 - MGP_129S1SvImJ_P0035972 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035973.1 MGP_129S1SvImJ_G0020120.1 mouse_genomes_project 12 113013722 113015220 - protein_coding retained_intron MGP_129S1SvImJ_T0035974.1 MGP_129S1SvImJ_G0020120.1 mouse_genomes_project 12 113014176 113022141 - MGP_129S1SvImJ_P0035974 protein_coding protein_coding MGP_129S1SvImJ_T0035975.1 MGP_129S1SvImJ_G0020120.1 mouse_genomes_project 12 113014817 113015806 - MGP_129S1SvImJ_P0035975 protein_coding protein_coding MGP_129S1SvImJ_T0035976.1 MGP_129S1SvImJ_G0020120.1 mouse_genomes_project 12 113014833 113015499 - MGP_129S1SvImJ_P0035976 protein_coding protein_coding MGP_129S1SvImJ_T0000135.1 MGP_129S1SvImJ_G0000103.1 mouse_genomes_project 12 118841984 118842416 - MGP_129S1SvImJ_P0000135 Ighv1-80 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0035361.1 MGP_129S1SvImJ_G0019924.1 mouse_genomes_project 12 84717956 84725007 + MGP_129S1SvImJ_P0035361 Acot4 protein_coding protein_coding MGP_129S1SvImJ_T0035362.1 MGP_129S1SvImJ_G0019924.1 mouse_genomes_project 12 84718284 84722506 + Acot4 protein_coding retained_intron MGP_129S1SvImJ_T0034852.1 MGP_129S1SvImJ_G0019750.1 mouse_genomes_project 12 54619006 54620664 + MGP_129S1SvImJ_P0034852 Aldoart2 protein_coding protein_coding MGP_129S1SvImJ_T0012816.1 MGP_129S1SvImJ_G0010905.1 mouse_genomes_project 12 54437990 54438513 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0035853.1 MGP_129S1SvImJ_G0020080.1 mouse_genomes_project 12 106572249 106689749 - MGP_129S1SvImJ_P0035853 Clmn protein_coding protein_coding MGP_129S1SvImJ_T0035854.1 MGP_129S1SvImJ_G0020080.1 mouse_genomes_project 12 106572249 106689749 - MGP_129S1SvImJ_P0035854 Clmn protein_coding protein_coding MGP_129S1SvImJ_T0000101.1 MGP_129S1SvImJ_G0000078.1 mouse_genomes_project 12 117325014 117325497 - MGP_129S1SvImJ_P0000101 Ighv1-12 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000102.1 MGP_129S1SvImJ_G0000078.1 mouse_genomes_project 12 117325014 117325497 - MGP_129S1SvImJ_P0000102 Ighv1-12 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000103.1 MGP_129S1SvImJ_G0000078.1 mouse_genomes_project 12 117325014 117325322 - MGP_129S1SvImJ_P0000103 Ighv1-12 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0035222.1 MGP_129S1SvImJ_G0019886.1 mouse_genomes_project 12 80508725 80607516 - MGP_129S1SvImJ_P0035222 Actn1 protein_coding protein_coding MGP_129S1SvImJ_T0035223.1 MGP_129S1SvImJ_G0019886.1 mouse_genomes_project 12 80509553 80607236 - MGP_129S1SvImJ_P0035223 Actn1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035224.1 MGP_129S1SvImJ_G0019886.1 mouse_genomes_project 12 80509553 80607236 - MGP_129S1SvImJ_P0035224 Actn1 protein_coding protein_coding MGP_129S1SvImJ_T0003433.1 MGP_129S1SvImJ_G0003151.1 mouse_genomes_project 12 84278508 84281380 - Gm29361 antisense antisense MGP_129S1SvImJ_T0035117.1 MGP_129S1SvImJ_G0019844.1 mouse_genomes_project 12 74278141 74279348 - MGP_129S1SvImJ_P0035117 Gm11042 protein_coding protein_coding MGP_129S1SvImJ_T0034567.1 MGP_129S1SvImJ_G0019637.1 mouse_genomes_project 12 24177169 24190833 - MGP_129S1SvImJ_P0034567 Rsad2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034568.1 MGP_129S1SvImJ_G0019637.1 mouse_genomes_project 12 24177169 24190854 - MGP_129S1SvImJ_P0034568 Rsad2 protein_coding protein_coding MGP_129S1SvImJ_T0034569.1 MGP_129S1SvImJ_G0019637.1 mouse_genomes_project 12 24185065 24189260 - Rsad2 protein_coding processed_transcript MGP_129S1SvImJ_T0036034.1 MGP_129S1SvImJ_G0020140.1 mouse_genomes_project 12 114116607 114138753 + MGP_129S1SvImJ_P0036034 Apopt1 protein_coding protein_coding MGP_129S1SvImJ_T0036035.1 MGP_129S1SvImJ_G0020140.1 mouse_genomes_project 12 114116626 114165956 + MGP_129S1SvImJ_P0036035 Apopt1 protein_coding protein_coding MGP_129S1SvImJ_T0036036.1 MGP_129S1SvImJ_G0020140.1 mouse_genomes_project 12 114116626 114160962 + MGP_129S1SvImJ_P0036036 Apopt1 protein_coding protein_coding MGP_129S1SvImJ_T0036037.1 MGP_129S1SvImJ_G0020140.1 mouse_genomes_project 12 114116630 114127982 + MGP_129S1SvImJ_P0036037 Apopt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036038.1 MGP_129S1SvImJ_G0020140.1 mouse_genomes_project 12 114116632 114132314 + MGP_129S1SvImJ_P0036038 Apopt1 protein_coding protein_coding MGP_129S1SvImJ_T0034381.1 MGP_129S1SvImJ_G0019567.1 mouse_genomes_project 12 1118639 1236529 - MGP_129S1SvImJ_P0034381 Ncoa1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034556.1 MGP_129S1SvImJ_G0019632.1 mouse_genomes_project 12 22389166 22395075 + MGP_129S1SvImJ_P0034556 Rrm2 protein_coding protein_coding MGP_129S1SvImJ_T0034557.1 MGP_129S1SvImJ_G0019632.1 mouse_genomes_project 12 22389481 22390511 + Rrm2 protein_coding retained_intron MGP_129S1SvImJ_T0034558.1 MGP_129S1SvImJ_G0019632.1 mouse_genomes_project 12 22389677 22392695 + MGP_129S1SvImJ_P0034558 Rrm2 protein_coding protein_coding MGP_129S1SvImJ_T0034559.1 MGP_129S1SvImJ_G0019632.1 mouse_genomes_project 12 22389950 22394271 + MGP_129S1SvImJ_P0034559 Rrm2 protein_coding protein_coding MGP_129S1SvImJ_T0012849.1 MGP_129S1SvImJ_G0010938.1 mouse_genomes_project 12 103235886 103236229 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0035735.1 MGP_129S1SvImJ_G0020030.1 mouse_genomes_project 12 103908643 104019277 + MGP_129S1SvImJ_P0035735 Rin3 protein_coding protein_coding MGP_129S1SvImJ_T0035736.1 MGP_129S1SvImJ_G0020030.1 mouse_genomes_project 12 103908762 103990299 + MGP_129S1SvImJ_P0035736 Rin3 protein_coding protein_coding MGP_129S1SvImJ_T0035737.1 MGP_129S1SvImJ_G0020030.1 mouse_genomes_project 12 103908763 103952541 + MGP_129S1SvImJ_P0035737 Rin3 protein_coding protein_coding MGP_129S1SvImJ_T0035738.1 MGP_129S1SvImJ_G0020030.1 mouse_genomes_project 12 103909218 104019277 + MGP_129S1SvImJ_P0035738 Rin3 protein_coding protein_coding MGP_129S1SvImJ_T0035739.1 MGP_129S1SvImJ_G0020030.1 mouse_genomes_project 12 103981979 103988738 + Rin3 protein_coding processed_transcript MGP_129S1SvImJ_T0035740.1 MGP_129S1SvImJ_G0020030.1 mouse_genomes_project 12 103981979 103995837 + Rin3 protein_coding processed_transcript MGP_129S1SvImJ_T0035741.1 MGP_129S1SvImJ_G0020030.1 mouse_genomes_project 12 103982014 103986463 + Rin3 protein_coding retained_intron MGP_129S1SvImJ_T0000096.1 MGP_129S1SvImJ_G0000075.1 mouse_genomes_project 12 117236610 117237045 - MGP_129S1SvImJ_P0000096 Ighv15-2 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000097.1 MGP_129S1SvImJ_G0000075.1 mouse_genomes_project 12 117236610 117237045 - MGP_129S1SvImJ_P0000097 Ighv15-2 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0036098.1 MGP_129S1SvImJ_G0020160.1 mouse_genomes_project 12 115245695 115270952 - MGP_129S1SvImJ_P0036098 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0036099.1 MGP_129S1SvImJ_G0020160.1 mouse_genomes_project 12 115245702 115253447 - MGP_129S1SvImJ_P0036099 protein_coding protein_coding MGP_129S1SvImJ_T0036100.1 MGP_129S1SvImJ_G0020160.1 mouse_genomes_project 12 115245942 115248763 - MGP_129S1SvImJ_P0036100 protein_coding protein_coding MGP_129S1SvImJ_T0035591.1 MGP_129S1SvImJ_G0019994.1 mouse_genomes_project 12 89323822 89424376 + MGP_129S1SvImJ_P0035591 Adck1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0036164.1 MGP_129S1SvImJ_G0020184.1 mouse_genomes_project 12 120433028 120690897 + MGP_129S1SvImJ_P0036164 Rapgef5 protein_coding protein_coding MGP_129S1SvImJ_T0036165.1 MGP_129S1SvImJ_G0020184.1 mouse_genomes_project 12 120451936 120693660 + MGP_129S1SvImJ_P0036165 Rapgef5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034880.1 MGP_129S1SvImJ_G0019761.1 mouse_genomes_project 12 56733806 56739295 - MGP_129S1SvImJ_P0034880 Foxa1 protein_coding protein_coding MGP_129S1SvImJ_T0006517.1 MGP_129S1SvImJ_G0005416.1 mouse_genomes_project 12 113662086 113664688 + A230087F16Rik lincRNA lincRNA MGP_129S1SvImJ_T0006518.1 MGP_129S1SvImJ_G0005416.1 mouse_genomes_project 12 113662108 113671313 + A230087F16Rik lincRNA lincRNA MGP_129S1SvImJ_T0009851.1 MGP_129S1SvImJ_G0007967.1 mouse_genomes_project 12 111820731 111820822 + Mir431 miRNA miRNA MGP_129S1SvImJ_T0099324.1 MGP_129S1SvImJ_G0037391.1 mouse_genomes_project 12 68813343 68813447 - Gm24499 snRNA snRNA MGP_129S1SvImJ_T0011354.1 MGP_129S1SvImJ_G0009470.1 mouse_genomes_project 12 87683392 87683694 + Gm25888 misc_RNA misc_RNA MGP_129S1SvImJ_T0000124.1 MGP_129S1SvImJ_G0000096.1 mouse_genomes_project 12 118781662 118782149 - MGP_129S1SvImJ_P0000124 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0036082.1 MGP_129S1SvImJ_G0020155.1 mouse_genomes_project 12 115105622 115109947 + MGP_129S1SvImJ_P0036082 Siva1 protein_coding protein_coding MGP_129S1SvImJ_T0036083.1 MGP_129S1SvImJ_G0020155.1 mouse_genomes_project 12 115105622 115109947 + MGP_129S1SvImJ_P0036083 Siva1 protein_coding protein_coding MGP_129S1SvImJ_T0034881.1 MGP_129S1SvImJ_G0019762.1 mouse_genomes_project 12 56740558 56940765 + MGP_129S1SvImJ_P0034881 Ttc6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034882.1 MGP_129S1SvImJ_G0019762.1 mouse_genomes_project 12 56760140 56820484 + MGP_129S1SvImJ_P0034882 Ttc6 protein_coding protein_coding MGP_129S1SvImJ_T0034883.1 MGP_129S1SvImJ_G0019762.1 mouse_genomes_project 12 56848714 56851019 + MGP_129S1SvImJ_P0034883 Ttc6 protein_coding protein_coding MGP_129S1SvImJ_T0035813.1 MGP_129S1SvImJ_G0020056.1 mouse_genomes_project 12 105363983 105371307 - MGP_129S1SvImJ_P0035813 Serpina16 protein_coding protein_coding MGP_129S1SvImJ_T0035814.1 MGP_129S1SvImJ_G0020056.1 mouse_genomes_project 12 105364071 105370632 - MGP_129S1SvImJ_P0035814 Serpina16 protein_coding protein_coding MGP_129S1SvImJ_T0036060.1 MGP_129S1SvImJ_G0020146.1 mouse_genomes_project 12 114408216 114500975 + MGP_129S1SvImJ_P0036060 Tdrd9 protein_coding protein_coding MGP_129S1SvImJ_T0036066.1 MGP_129S1SvImJ_G0020146.1 mouse_genomes_project 12 114430263 114500471 + MGP_129S1SvImJ_P0036066 Tdrd9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036067.1 MGP_129S1SvImJ_G0020146.1 mouse_genomes_project 12 114430263 114500471 + MGP_129S1SvImJ_P0036067 Tdrd9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036068.1 MGP_129S1SvImJ_G0020146.1 mouse_genomes_project 12 114449338 114460478 + Tdrd9 protein_coding retained_intron MGP_129S1SvImJ_T0036069.1 MGP_129S1SvImJ_G0020146.1 mouse_genomes_project 12 114460921 114475310 + Tdrd9 protein_coding processed_transcript MGP_129S1SvImJ_T0036070.1 MGP_129S1SvImJ_G0020146.1 mouse_genomes_project 12 114495274 114499741 + Tdrd9 protein_coding retained_intron MGP_129S1SvImJ_T0009829.1 MGP_129S1SvImJ_G0007945.1 mouse_genomes_project 12 92247725 92249751 + miRNA miRNA MGP_129S1SvImJ_T0034700.1 MGP_129S1SvImJ_G0019686.1 mouse_genomes_project 12 34205576 34210676 + Agr2 protein_coding retained_intron MGP_129S1SvImJ_T0034701.1 MGP_129S1SvImJ_G0019686.1 mouse_genomes_project 12 34205576 34217887 + MGP_129S1SvImJ_P0034701 Agr2 protein_coding protein_coding MGP_129S1SvImJ_T0099326.1 MGP_129S1SvImJ_G0037393.1 mouse_genomes_project 12 69721415 69721518 - Gm23579 snRNA snRNA MGP_129S1SvImJ_T0034861.1 MGP_129S1SvImJ_G0019756.1 mouse_genomes_project 12 55732648 55734533 - MGP_129S1SvImJ_P0034861 Nkx2-9 protein_coding protein_coding MGP_129S1SvImJ_T0006467.1 MGP_129S1SvImJ_G0005392.1 mouse_genomes_project 12 106749796 106750438 - Gm28875 lincRNA lincRNA MGP_129S1SvImJ_T0036182.1 MGP_129S1SvImJ_G0020192.1 mouse_genomes_project 12 122946924 123014717 + MGP_129S1SvImJ_P0036182 Tmem196 protein_coding protein_coding MGP_129S1SvImJ_T0036183.1 MGP_129S1SvImJ_G0020192.1 mouse_genomes_project 12 122947376 123014319 + MGP_129S1SvImJ_P0036183 Tmem196 protein_coding protein_coding MGP_129S1SvImJ_T0036184.1 MGP_129S1SvImJ_G0020192.1 mouse_genomes_project 12 122947390 123010391 + MGP_129S1SvImJ_P0036184 Tmem196 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036185.1 MGP_129S1SvImJ_G0020192.1 mouse_genomes_project 12 122947524 123014212 + MGP_129S1SvImJ_P0036185 Tmem196 protein_coding protein_coding MGP_129S1SvImJ_T0036186.1 MGP_129S1SvImJ_G0020192.1 mouse_genomes_project 12 122947536 123014560 + MGP_129S1SvImJ_P0036186 Tmem196 protein_coding protein_coding MGP_129S1SvImJ_T0035152.1 MGP_129S1SvImJ_G0019855.1 mouse_genomes_project 12 76423797 76432982 + MGP_129S1SvImJ_P0035152 Akap5 protein_coding protein_coding MGP_129S1SvImJ_T0035153.1 MGP_129S1SvImJ_G0019855.1 mouse_genomes_project 12 76423797 76432984 + MGP_129S1SvImJ_P0035153 Akap5 protein_coding protein_coding MGP_129S1SvImJ_T0035154.1 MGP_129S1SvImJ_G0019855.1 mouse_genomes_project 12 76423811 76428889 + MGP_129S1SvImJ_P0035154 Akap5 protein_coding protein_coding MGP_129S1SvImJ_T0035175.1 MGP_129S1SvImJ_G0019866.1 mouse_genomes_project 12 76924400 76950209 - MGP_129S1SvImJ_P0035175 Rab15 protein_coding protein_coding MGP_129S1SvImJ_T0035176.1 MGP_129S1SvImJ_G0019866.1 mouse_genomes_project 12 76926319 76927280 - Rab15 protein_coding retained_intron MGP_129S1SvImJ_T0035177.1 MGP_129S1SvImJ_G0019866.1 mouse_genomes_project 12 76926567 76931927 - MGP_129S1SvImJ_P0035177 Rab15 protein_coding protein_coding MGP_129S1SvImJ_T0035178.1 MGP_129S1SvImJ_G0019866.1 mouse_genomes_project 12 76926775 76950800 - MGP_129S1SvImJ_P0035178 Rab15 protein_coding protein_coding MGP_129S1SvImJ_T0035179.1 MGP_129S1SvImJ_G0019866.1 mouse_genomes_project 12 76927011 76946950 - MGP_129S1SvImJ_P0035179 Rab15 protein_coding protein_coding MGP_129S1SvImJ_T0035180.1 MGP_129S1SvImJ_G0019866.1 mouse_genomes_project 12 76929328 76950354 - Rab15 protein_coding retained_intron MGP_129S1SvImJ_T0011350.1 MGP_129S1SvImJ_G0009466.1 mouse_genomes_project 12 70706784 70707094 + Gm24857 misc_RNA misc_RNA MGP_129S1SvImJ_T0009819.1 MGP_129S1SvImJ_G0007935.1 mouse_genomes_project 12 77298065 77298133 - Gm22696 miRNA miRNA MGP_129S1SvImJ_T0100554.1 MGP_129S1SvImJ_G0038621.1 mouse_genomes_project 12 25420829 25420954 + Gm24326 snoRNA snoRNA MGP_129S1SvImJ_T0009826.1 MGP_129S1SvImJ_G0007942.1 mouse_genomes_project 12 88355241 88355320 - Mir3068 miRNA miRNA MGP_129S1SvImJ_T0000283.1 MGP_129S1SvImJ_G0000225.1 mouse_genomes_project 12 117710883 117711317 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0098305.1 MGP_129S1SvImJ_G0036390.1 mouse_genomes_project 12 33139748 33141366 + pseudogene pseudogene MGP_129S1SvImJ_T0035984.1 MGP_129S1SvImJ_G0020122.1 mouse_genomes_project 12 113142824 113178514 - MGP_129S1SvImJ_P0035984 Mok protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035985.1 MGP_129S1SvImJ_G0020122.1 mouse_genomes_project 12 113143021 113178701 - Mok protein_coding retained_intron MGP_129S1SvImJ_T0035986.1 MGP_129S1SvImJ_G0020122.1 mouse_genomes_project 12 113143021 113178701 - MGP_129S1SvImJ_P0035986 Mok protein_coding protein_coding MGP_129S1SvImJ_T0035987.1 MGP_129S1SvImJ_G0020122.1 mouse_genomes_project 12 113143021 113178692 - MGP_129S1SvImJ_P0035987 Mok protein_coding protein_coding MGP_129S1SvImJ_T0035988.1 MGP_129S1SvImJ_G0020122.1 mouse_genomes_project 12 113151945 113178689 - MGP_129S1SvImJ_P0035988 Mok protein_coding protein_coding MGP_129S1SvImJ_T0009799.1 MGP_129S1SvImJ_G0007915.1 mouse_genomes_project 12 31113617 31113768 + Gm22904 miRNA miRNA MGP_129S1SvImJ_T0011348.1 MGP_129S1SvImJ_G0009464.1 mouse_genomes_project 12 69049167 69049467 - Rn7s2 misc_RNA misc_RNA MGP_129S1SvImJ_T0000092.1 MGP_129S1SvImJ_G0000071.1 mouse_genomes_project 12 117108267 117108811 - MGP_129S1SvImJ_P0000092 Ighv8-2 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0035753.1 MGP_129S1SvImJ_G0020036.1 mouse_genomes_project 12 104399647 104417187 - MGP_129S1SvImJ_P0035753 Gm20604 protein_coding protein_coding MGP_129S1SvImJ_T0000276.1 MGP_129S1SvImJ_G0000218.1 mouse_genomes_project 12 117224481 117224774 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0035516.1 MGP_129S1SvImJ_G0019970.1 mouse_genomes_project 12 87197794 87362961 + MGP_129S1SvImJ_P0035516 Esrrb protein_coding protein_coding MGP_129S1SvImJ_T0035517.1 MGP_129S1SvImJ_G0019970.1 mouse_genomes_project 12 87259783 87362958 + MGP_129S1SvImJ_P0035517 Esrrb protein_coding protein_coding MGP_129S1SvImJ_T0035518.1 MGP_129S1SvImJ_G0019970.1 mouse_genomes_project 12 87259783 87356855 + MGP_129S1SvImJ_P0035518 Esrrb protein_coding protein_coding MGP_129S1SvImJ_T0035519.1 MGP_129S1SvImJ_G0019970.1 mouse_genomes_project 12 87260022 87361133 + MGP_129S1SvImJ_P0035519 Esrrb protein_coding protein_coding MGP_129S1SvImJ_T0035520.1 MGP_129S1SvImJ_G0019970.1 mouse_genomes_project 12 87307943 87360398 + MGP_129S1SvImJ_P0035520 Esrrb protein_coding protein_coding MGP_129S1SvImJ_T0035521.1 MGP_129S1SvImJ_G0019970.1 mouse_genomes_project 12 87345741 87351300 + Esrrb protein_coding processed_transcript MGP_129S1SvImJ_T0011353.1 MGP_129S1SvImJ_G0009469.1 mouse_genomes_project 12 87508789 87508874 + Gm27993 misc_RNA misc_RNA MGP_129S1SvImJ_T0035515.1 MGP_129S1SvImJ_G0019969.1 mouse_genomes_project 12 87070520 87121799 + MGP_129S1SvImJ_P0035515 Gpatch2l protein_coding protein_coding MGP_129S1SvImJ_T0012824.1 MGP_129S1SvImJ_G0010913.1 mouse_genomes_project 12 62305460 62306460 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0035570.1 MGP_129S1SvImJ_G0019987.1 mouse_genomes_project 12 88343398 88347000 - Alkbh1 protein_coding processed_transcript MGP_129S1SvImJ_T0035571.1 MGP_129S1SvImJ_G0019987.1 mouse_genomes_project 12 88343727 88361389 - MGP_129S1SvImJ_P0035571 Alkbh1 protein_coding protein_coding MGP_129S1SvImJ_T0035572.1 MGP_129S1SvImJ_G0019987.1 mouse_genomes_project 12 88345635 88361376 - MGP_129S1SvImJ_P0035572 Alkbh1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035573.1 MGP_129S1SvImJ_G0019987.1 mouse_genomes_project 12 88345635 88361378 - MGP_129S1SvImJ_P0035573 Alkbh1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035574.1 MGP_129S1SvImJ_G0019987.1 mouse_genomes_project 12 88345638 88361386 - MGP_129S1SvImJ_P0035574 Alkbh1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035575.1 MGP_129S1SvImJ_G0019987.1 mouse_genomes_project 12 88346372 88361378 - MGP_129S1SvImJ_P0035575 Alkbh1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035576.1 MGP_129S1SvImJ_G0019987.1 mouse_genomes_project 12 88346683 88356120 - MGP_129S1SvImJ_P0035576 Alkbh1 protein_coding protein_coding MGP_129S1SvImJ_T0035577.1 MGP_129S1SvImJ_G0019987.1 mouse_genomes_project 12 88348992 88359287 - Alkbh1 protein_coding processed_transcript MGP_129S1SvImJ_T0035578.1 MGP_129S1SvImJ_G0019987.1 mouse_genomes_project 12 88350808 88361383 - MGP_129S1SvImJ_P0035578 Alkbh1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035579.1 MGP_129S1SvImJ_G0019987.1 mouse_genomes_project 12 88350819 88361389 - Alkbh1 protein_coding retained_intron MGP_129S1SvImJ_T0035580.1 MGP_129S1SvImJ_G0019987.1 mouse_genomes_project 12 88360232 88361567 - Alkbh1 protein_coding retained_intron MGP_129S1SvImJ_T0035581.1 MGP_129S1SvImJ_G0019987.1 mouse_genomes_project 12 88361060 88361468 - MGP_129S1SvImJ_P0035581 Alkbh1 protein_coding protein_coding MGP_129S1SvImJ_T0009877.1 MGP_129S1SvImJ_G0007993.1 mouse_genomes_project 12 111960905 111960981 + Mir543 miRNA miRNA MGP_129S1SvImJ_T0102177.1 MGP_129S1SvImJ_G0040011.1 mouse_genomes_project 12 105598840 105612985 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0035590.1 MGP_129S1SvImJ_G0019993.1 mouse_genomes_project 12 89131760 89142987 - MGP_129S1SvImJ_P0035590 protein_coding protein_coding MGP_129S1SvImJ_T0035196.1 MGP_129S1SvImJ_G0019871.1 mouse_genomes_project 12 78953619 78999141 + MGP_129S1SvImJ_P0035196 Fam71d protein_coding protein_coding MGP_129S1SvImJ_T0035066.1 MGP_129S1SvImJ_G0019825.1 mouse_genomes_project 12 72273990 72350007 + MGP_129S1SvImJ_P0035066 Lrrc9 protein_coding protein_coding MGP_129S1SvImJ_T0035067.1 MGP_129S1SvImJ_G0019825.1 mouse_genomes_project 12 72274057 72335605 + MGP_129S1SvImJ_P0035067 Lrrc9 protein_coding protein_coding MGP_129S1SvImJ_T0035068.1 MGP_129S1SvImJ_G0019825.1 mouse_genomes_project 12 72274073 72301735 + Lrrc9 protein_coding retained_intron MGP_129S1SvImJ_T0035069.1 MGP_129S1SvImJ_G0019825.1 mouse_genomes_project 12 72274159 72353776 + Lrrc9 protein_coding processed_transcript MGP_129S1SvImJ_T0035070.1 MGP_129S1SvImJ_G0019825.1 mouse_genomes_project 12 72274366 72287899 + Lrrc9 protein_coding retained_intron MGP_129S1SvImJ_T0035071.1 MGP_129S1SvImJ_G0019825.1 mouse_genomes_project 12 72274373 72308425 + Lrrc9 protein_coding retained_intron MGP_129S1SvImJ_T0035072.1 MGP_129S1SvImJ_G0019825.1 mouse_genomes_project 12 72274500 72351825 + MGP_129S1SvImJ_P0035072 Lrrc9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035073.1 MGP_129S1SvImJ_G0019825.1 mouse_genomes_project 12 72310288 72311876 + Lrrc9 protein_coding retained_intron MGP_129S1SvImJ_T0035027.1 MGP_129S1SvImJ_G0019813.1 mouse_genomes_project 12 70755308 70774907 + Psma3 protein_coding retained_intron MGP_129S1SvImJ_T0035028.1 MGP_129S1SvImJ_G0019813.1 mouse_genomes_project 12 70755308 70775327 + MGP_129S1SvImJ_P0035028 Psma3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035029.1 MGP_129S1SvImJ_G0019813.1 mouse_genomes_project 12 70755308 70774910 + MGP_129S1SvImJ_P0035029 Psma3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035030.1 MGP_129S1SvImJ_G0019813.1 mouse_genomes_project 12 70755323 70759974 + Psma3 protein_coding retained_intron MGP_129S1SvImJ_T0035031.1 MGP_129S1SvImJ_G0019813.1 mouse_genomes_project 12 70755330 70774881 + MGP_129S1SvImJ_P0035031 Psma3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035032.1 MGP_129S1SvImJ_G0019813.1 mouse_genomes_project 12 70755334 70765251 + Psma3 protein_coding retained_intron MGP_129S1SvImJ_T0035033.1 MGP_129S1SvImJ_G0019813.1 mouse_genomes_project 12 70755362 70774801 + MGP_129S1SvImJ_P0035033 Psma3 protein_coding protein_coding MGP_129S1SvImJ_T0035034.1 MGP_129S1SvImJ_G0019813.1 mouse_genomes_project 12 70767305 70774911 + MGP_129S1SvImJ_P0035034 Psma3 protein_coding protein_coding MGP_129S1SvImJ_T0006458.1 MGP_129S1SvImJ_G0005383.1 mouse_genomes_project 12 91867780 91881309 + Gm26512 lincRNA lincRNA MGP_129S1SvImJ_T0000077.1 MGP_129S1SvImJ_G0000061.1 mouse_genomes_project 12 116842287 116842828 - MGP_129S1SvImJ_P0000077 Ighv7-4 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000078.1 MGP_129S1SvImJ_G0000061.1 mouse_genomes_project 12 116842287 116842754 - MGP_129S1SvImJ_P0000078 Ighv7-4 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000032.1 MGP_129S1SvImJ_G0000026.1 mouse_genomes_project 12 116081333 116081343 - IG_D_pseudogene IG_D_pseudogene MGP_129S1SvImJ_T0035971.1 MGP_129S1SvImJ_G0020119.1 mouse_genomes_project 12 112983129 113000662 - MGP_129S1SvImJ_P0035971 1700001K19Rik protein_coding protein_coding MGP_129S1SvImJ_T0034898.1 MGP_129S1SvImJ_G0019769.1 mouse_genomes_project 12 58298609 58311645 + MGP_129S1SvImJ_P0034898 Mia2 protein_coding protein_coding MGP_129S1SvImJ_T0012806.1 MGP_129S1SvImJ_G0010895.1 mouse_genomes_project 12 2520188 2520996 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100548.1 MGP_129S1SvImJ_G0038615.1 mouse_genomes_project 12 9228731 9228860 + Gm25610 snoRNA snoRNA MGP_129S1SvImJ_T0009828.1 MGP_129S1SvImJ_G0007944.1 mouse_genomes_project 12 90465298 90465380 + Gm23989 miRNA miRNA MGP_129S1SvImJ_T0009880.1 MGP_129S1SvImJ_G0007996.1 mouse_genomes_project 12 111966363 111966449 + Mir376c miRNA miRNA MGP_129S1SvImJ_T0034362.1 MGP_129S1SvImJ_G0019561.1 mouse_genomes_project 12 804473 810135 + MGP_129S1SvImJ_P0034362 Pomc protein_coding protein_coding MGP_129S1SvImJ_T0099309.1 MGP_129S1SvImJ_G0037376.1 mouse_genomes_project 12 50552268 50552370 - Gm22663 snRNA snRNA MGP_129S1SvImJ_T0036094.1 MGP_129S1SvImJ_G0020158.1 mouse_genomes_project 12 115193818 115218214 + MGP_129S1SvImJ_P0036094 Cep170b protein_coding protein_coding MGP_129S1SvImJ_T0036095.1 MGP_129S1SvImJ_G0020158.1 mouse_genomes_project 12 115193838 115218210 + MGP_129S1SvImJ_P0036095 Cep170b protein_coding protein_coding MGP_129S1SvImJ_T0036096.1 MGP_129S1SvImJ_G0020158.1 mouse_genomes_project 12 115193838 115218210 + MGP_129S1SvImJ_P0036096 Cep170b protein_coding protein_coding MGP_129S1SvImJ_T0009810.1 MGP_129S1SvImJ_G0007926.1 mouse_genomes_project 12 68820576 68820655 + miRNA miRNA MGP_129S1SvImJ_T0098463.1 MGP_129S1SvImJ_G0036548.1 mouse_genomes_project 12 9313838 9313969 + Gm26171 rRNA rRNA MGP_129S1SvImJ_T0034661.1 MGP_129S1SvImJ_G0019670.1 mouse_genomes_project 12 30406832 30411077 + MGP_129S1SvImJ_P0034661 Ccdc71l protein_coding protein_coding MGP_129S1SvImJ_T0000104.1 MGP_129S1SvImJ_G0000079.1 mouse_genomes_project 12 117389726 117390160 - MGP_129S1SvImJ_P0000104 Ighv1-15 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0099342.1 MGP_129S1SvImJ_G0037409.1 mouse_genomes_project 12 115716179 115716283 + Gm25622 snRNA snRNA MGP_129S1SvImJ_T0099315.1 MGP_129S1SvImJ_G0037382.1 mouse_genomes_project 12 53674828 53675871 + Gm25679 snRNA snRNA MGP_129S1SvImJ_T0000058.1 MGP_129S1SvImJ_G0000047.1 mouse_genomes_project 12 116146893 116147380 - MGP_129S1SvImJ_P0000058 Ighv5-2 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000059.1 MGP_129S1SvImJ_G0000047.1 mouse_genomes_project 12 116146893 116147380 - MGP_129S1SvImJ_P0000059 Ighv5-2 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0034447.1 MGP_129S1SvImJ_G0019592.1 mouse_genomes_project 12 6121137 6127535 + MGP_129S1SvImJ_P0034447 Ttc32 protein_coding protein_coding MGP_129S1SvImJ_T0000031.1 MGP_129S1SvImJ_G0000025.1 mouse_genomes_project 12 116009781 116009810 - IG_D_pseudogene IG_D_pseudogene MGP_129S1SvImJ_T0034487.1 MGP_129S1SvImJ_G0019612.1 mouse_genomes_project 12 14213655 14231015 + MGP_129S1SvImJ_P0034487 E2f6 protein_coding protein_coding MGP_129S1SvImJ_T0034488.1 MGP_129S1SvImJ_G0019612.1 mouse_genomes_project 12 14213660 14228079 + MGP_129S1SvImJ_P0034488 E2f6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0003438.1 MGP_129S1SvImJ_G0003156.1 mouse_genomes_project 12 99584826 99585248 - antisense antisense MGP_129S1SvImJ_T0034939.1 MGP_129S1SvImJ_G0019780.1 mouse_genomes_project 12 64559242 64615453 + MGP_129S1SvImJ_P0034939 Fancm protein_coding protein_coding MGP_129S1SvImJ_T0035035.1 MGP_129S1SvImJ_G0019814.1 mouse_genomes_project 12 70801374 70877579 + MGP_129S1SvImJ_P0035035 Arid4a protein_coding protein_coding MGP_129S1SvImJ_T0035036.1 MGP_129S1SvImJ_G0019814.1 mouse_genomes_project 12 70801413 70856585 + Arid4a protein_coding processed_transcript MGP_129S1SvImJ_T0035037.1 MGP_129S1SvImJ_G0019814.1 mouse_genomes_project 12 70803435 70835048 + MGP_129S1SvImJ_P0035037 Arid4a protein_coding protein_coding MGP_129S1SvImJ_T0035038.1 MGP_129S1SvImJ_G0019814.1 mouse_genomes_project 12 70836049 70864481 + MGP_129S1SvImJ_P0035038 Arid4a protein_coding protein_coding MGP_129S1SvImJ_T0000886.1 MGP_129S1SvImJ_G0000819.1 mouse_genomes_project 12 83540330 83541641 - TEC TEC MGP_129S1SvImJ_T0035213.1 MGP_129S1SvImJ_G0019882.1 mouse_genomes_project 12 79491465 79506157 + MGP_129S1SvImJ_P0035213 Rdh12 protein_coding protein_coding MGP_129S1SvImJ_T0035214.1 MGP_129S1SvImJ_G0019882.1 mouse_genomes_project 12 79491482 79506156 + MGP_129S1SvImJ_P0035214 Rdh12 protein_coding protein_coding MGP_129S1SvImJ_T0035215.1 MGP_129S1SvImJ_G0019882.1 mouse_genomes_project 12 79491498 79506156 + Rdh12 protein_coding retained_intron MGP_129S1SvImJ_T0035216.1 MGP_129S1SvImJ_G0019882.1 mouse_genomes_project 12 79493212 79495297 + MGP_129S1SvImJ_P0035216 Rdh12 protein_coding protein_coding MGP_129S1SvImJ_T0099298.1 MGP_129S1SvImJ_G0037365.1 mouse_genomes_project 12 1666584 1666691 + Gm22003 snRNA snRNA MGP_129S1SvImJ_T0035811.1 MGP_129S1SvImJ_G0020055.1 mouse_genomes_project 12 105341037 105351620 - MGP_129S1SvImJ_P0035811 Serpina6 protein_coding protein_coding MGP_129S1SvImJ_T0035812.1 MGP_129S1SvImJ_G0020055.1 mouse_genomes_project 12 105348781 105351510 - MGP_129S1SvImJ_P0035812 Serpina6 protein_coding protein_coding MGP_129S1SvImJ_T0034712.1 MGP_129S1SvImJ_G0019693.1 mouse_genomes_project 12 34616254 34617194 - MGP_129S1SvImJ_P0034712 D630036H23Rik protein_coding protein_coding MGP_129S1SvImJ_T0034707.1 MGP_129S1SvImJ_G0019690.1 mouse_genomes_project 12 34381078 34428589 + MGP_129S1SvImJ_P0034707 Ankmy2 protein_coding protein_coding MGP_129S1SvImJ_T0009904.1 MGP_129S1SvImJ_G0008020.1 mouse_genomes_project 12 111987055 111987134 + Mir369 miRNA miRNA MGP_129S1SvImJ_T0009870.1 MGP_129S1SvImJ_G0007986.1 mouse_genomes_project 12 111956155 111956241 + Mir323 miRNA miRNA MGP_129S1SvImJ_T0034925.1 MGP_129S1SvImJ_G0019772.1 mouse_genomes_project 12 60859886 60958158 + Lrfn5 protein_coding processed_transcript MGP_129S1SvImJ_T0034926.1 MGP_129S1SvImJ_G0019772.1 mouse_genomes_project 12 60859903 61027493 + Lrfn5 protein_coding processed_transcript MGP_129S1SvImJ_T0034927.1 MGP_129S1SvImJ_G0019772.1 mouse_genomes_project 12 60860688 61222504 + MGP_129S1SvImJ_P0034927 Lrfn5 protein_coding protein_coding MGP_129S1SvImJ_T0034928.1 MGP_129S1SvImJ_G0019772.1 mouse_genomes_project 12 60860688 61204934 + MGP_129S1SvImJ_P0034928 Lrfn5 protein_coding protein_coding MGP_129S1SvImJ_T0034929.1 MGP_129S1SvImJ_G0019772.1 mouse_genomes_project 12 61220848 61222918 + Lrfn5 protein_coding retained_intron MGP_129S1SvImJ_T0006441.1 MGP_129S1SvImJ_G0005368.1 mouse_genomes_project 12 78437102 78448850 + lincRNA lincRNA MGP_129S1SvImJ_T0006442.1 MGP_129S1SvImJ_G0005368.1 mouse_genomes_project 12 78438591 78440966 + lincRNA lincRNA MGP_129S1SvImJ_T0006443.1 MGP_129S1SvImJ_G0005368.1 mouse_genomes_project 12 78440886 78448949 + lincRNA lincRNA MGP_129S1SvImJ_T0035426.1 MGP_129S1SvImJ_G0019943.1 mouse_genomes_project 12 85406555 85428050 - MGP_129S1SvImJ_P0035426 Syndig1l protein_coding protein_coding MGP_129S1SvImJ_T0098820.1 MGP_129S1SvImJ_G0036902.1 mouse_genomes_project 12 43560291 43574931 - Gm15902 sense_intronic sense_intronic MGP_129S1SvImJ_T0000025.1 MGP_129S1SvImJ_G0000019.1 mouse_genomes_project 12 116010018 116010028 - MGP_129S1SvImJ_P0000025 Ighd5-5 IG_D_gene IG_D_gene MGP_129S1SvImJ_T0034386.1 MGP_129S1SvImJ_G0019571.1 mouse_genomes_project 12 1612044 1644992 - MGP_129S1SvImJ_P0034386 Fam228a protein_coding protein_coding MGP_129S1SvImJ_T0012846.1 MGP_129S1SvImJ_G0010935.1 mouse_genomes_project 12 100649367 100649618 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000130.1 MGP_129S1SvImJ_G0000101.1 mouse_genomes_project 12 118841983 118842384 - MGP_129S1SvImJ_P0000130 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0035048.1 MGP_129S1SvImJ_G0019819.1 mouse_genomes_project 12 71638724 71801867 + MGP_129S1SvImJ_P0035048 Daam1 protein_coding protein_coding MGP_129S1SvImJ_T0034684.1 MGP_129S1SvImJ_G0019675.1 mouse_genomes_project 12 31458617 31467081 + MGP_129S1SvImJ_P0034684 Efcab10 protein_coding protein_coding MGP_129S1SvImJ_T0017324.1 MGP_129S1SvImJ_G0015227.1 mouse_genomes_project 12 18802024 18805830 - Gm20535 processed_transcript processed_transcript MGP_129S1SvImJ_T0100557.1 MGP_129S1SvImJ_G0038624.1 mouse_genomes_project 12 29194186 29194316 - Gm24613 snoRNA snoRNA MGP_129S1SvImJ_T0012869.1 MGP_129S1SvImJ_G0010958.1 mouse_genomes_project 12 118852361 118853701 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006421.1 MGP_129S1SvImJ_G0005352.1 mouse_genomes_project 12 28371863 28382389 - lincRNA lincRNA MGP_129S1SvImJ_T0034693.1 MGP_129S1SvImJ_G0019683.1 mouse_genomes_project 12 33208328 33310652 + MGP_129S1SvImJ_P0034693 Snx13 protein_coding protein_coding MGP_129S1SvImJ_T0034694.1 MGP_129S1SvImJ_G0019683.1 mouse_genomes_project 12 33208339 33297712 + MGP_129S1SvImJ_P0034694 Snx13 protein_coding protein_coding MGP_129S1SvImJ_T0035053.1 MGP_129S1SvImJ_G0019822.1 mouse_genomes_project 12 71901716 71911753 + MGP_129S1SvImJ_P0035053 Jkamp protein_coding protein_coding MGP_129S1SvImJ_T0035054.1 MGP_129S1SvImJ_G0019822.1 mouse_genomes_project 12 71901916 71910901 + Jkamp protein_coding processed_transcript MGP_129S1SvImJ_T0035055.1 MGP_129S1SvImJ_G0019822.1 mouse_genomes_project 12 71901984 71919453 + MGP_129S1SvImJ_P0035055 Jkamp protein_coding protein_coding MGP_129S1SvImJ_T0035056.1 MGP_129S1SvImJ_G0019822.1 mouse_genomes_project 12 71901984 71920062 + MGP_129S1SvImJ_P0035056 Jkamp protein_coding protein_coding MGP_129S1SvImJ_T0035057.1 MGP_129S1SvImJ_G0019822.1 mouse_genomes_project 12 71906075 71911753 + Jkamp protein_coding retained_intron MGP_129S1SvImJ_T0035058.1 MGP_129S1SvImJ_G0019822.1 mouse_genomes_project 12 71906616 71911627 + Jkamp protein_coding retained_intron MGP_129S1SvImJ_T0035059.1 MGP_129S1SvImJ_G0019822.1 mouse_genomes_project 12 71918401 71919453 + Jkamp protein_coding retained_intron MGP_129S1SvImJ_T0035745.1 MGP_129S1SvImJ_G0020032.1 mouse_genomes_project 12 104096987 104125882 + MGP_129S1SvImJ_P0035745 Golga5 protein_coding protein_coding MGP_129S1SvImJ_T0035746.1 MGP_129S1SvImJ_G0020032.1 mouse_genomes_project 12 104097763 104125882 + MGP_129S1SvImJ_P0035746 Golga5 protein_coding protein_coding MGP_129S1SvImJ_T0036103.1 MGP_129S1SvImJ_G0020162.1 mouse_genomes_project 12 115290038 115299191 - MGP_129S1SvImJ_P0036103 Cdca4 protein_coding protein_coding MGP_129S1SvImJ_T0006461.1 MGP_129S1SvImJ_G0005386.1 mouse_genomes_project 12 100995629 101058783 + Gm26839 lincRNA lincRNA MGP_129S1SvImJ_T0017366.1 MGP_129S1SvImJ_G0015243.1 mouse_genomes_project 12 118963691 118999142 - Gm20658 processed_transcript processed_transcript MGP_129S1SvImJ_T0017367.1 MGP_129S1SvImJ_G0015243.1 mouse_genomes_project 12 118963714 118999257 - Gm20658 processed_transcript processed_transcript MGP_129S1SvImJ_T0035561.1 MGP_129S1SvImJ_G0019984.1 mouse_genomes_project 12 88166389 88173641 + MGP_129S1SvImJ_P0035561 Ahsa1 protein_coding protein_coding MGP_129S1SvImJ_T0035230.1 MGP_129S1SvImJ_G0019892.1 mouse_genomes_project 12 81084141 81115732 + MGP_129S1SvImJ_P0035230 Plekhd1 protein_coding protein_coding MGP_129S1SvImJ_T0035231.1 MGP_129S1SvImJ_G0019892.1 mouse_genomes_project 12 81098363 81112203 + Plekhd1 protein_coding processed_transcript MGP_129S1SvImJ_T0035232.1 MGP_129S1SvImJ_G0019892.1 mouse_genomes_project 12 81112275 81113525 + MGP_129S1SvImJ_P0035232 Plekhd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035233.1 MGP_129S1SvImJ_G0019892.1 mouse_genomes_project 12 81113249 81114428 + Plekhd1 protein_coding retained_intron MGP_129S1SvImJ_T0035105.1 MGP_129S1SvImJ_G0019837.1 mouse_genomes_project 12 73260770 73268134 - MGP_129S1SvImJ_P0035105 D830013O20Rik protein_coding protein_coding MGP_129S1SvImJ_T0035693.1 MGP_129S1SvImJ_G0020018.1 mouse_genomes_project 12 101774148 101894275 - MGP_129S1SvImJ_P0035693 Ttc7b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035694.1 MGP_129S1SvImJ_G0020018.1 mouse_genomes_project 12 101774151 101989699 - MGP_129S1SvImJ_P0035694 Ttc7b protein_coding protein_coding MGP_129S1SvImJ_T0000268.1 MGP_129S1SvImJ_G0000210.1 mouse_genomes_project 12 116891248 116891542 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0034980.1 MGP_129S1SvImJ_G0019798.1 mouse_genomes_project 12 69284456 69287813 - Sos2 protein_coding retained_intron MGP_129S1SvImJ_T0034981.1 MGP_129S1SvImJ_G0019798.1 mouse_genomes_project 12 69284460 69389945 - MGP_129S1SvImJ_P0034981 Sos2 protein_coding protein_coding MGP_129S1SvImJ_T0034982.1 MGP_129S1SvImJ_G0019798.1 mouse_genomes_project 12 69285547 69389945 - MGP_129S1SvImJ_P0034982 Sos2 protein_coding protein_coding MGP_129S1SvImJ_T0034983.1 MGP_129S1SvImJ_G0019798.1 mouse_genomes_project 12 69285783 69389746 - MGP_129S1SvImJ_P0034983 Sos2 protein_coding protein_coding MGP_129S1SvImJ_T0034984.1 MGP_129S1SvImJ_G0019798.1 mouse_genomes_project 12 69286069 69289505 - Sos2 protein_coding retained_intron MGP_129S1SvImJ_T0034985.1 MGP_129S1SvImJ_G0019798.1 mouse_genomes_project 12 69295095 69297463 - Sos2 protein_coding retained_intron MGP_129S1SvImJ_T0034986.1 MGP_129S1SvImJ_G0019798.1 mouse_genomes_project 12 69315951 69318625 - Sos2 protein_coding retained_intron MGP_129S1SvImJ_T0012808.1 MGP_129S1SvImJ_G0010897.1 mouse_genomes_project 12 13070798 13071797 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034517.1 MGP_129S1SvImJ_G0019621.1 mouse_genomes_project 12 18718108 18820014 + MGP_129S1SvImJ_P0034517 Asap2 protein_coding protein_coding MGP_129S1SvImJ_T0034518.1 MGP_129S1SvImJ_G0019621.1 mouse_genomes_project 12 18718108 18820014 + MGP_129S1SvImJ_P0034518 Asap2 protein_coding protein_coding MGP_129S1SvImJ_T0034519.1 MGP_129S1SvImJ_G0019621.1 mouse_genomes_project 12 18718108 18820014 + MGP_129S1SvImJ_P0034519 Asap2 protein_coding protein_coding MGP_129S1SvImJ_T0034520.1 MGP_129S1SvImJ_G0019621.1 mouse_genomes_project 12 18718108 18818056 + MGP_129S1SvImJ_P0034520 Asap2 protein_coding protein_coding MGP_129S1SvImJ_T0035822.1 MGP_129S1SvImJ_G0020062.1 mouse_genomes_project 12 105685370 105696120 - MGP_129S1SvImJ_P0035822 protein_coding protein_coding MGP_129S1SvImJ_T0100615.1 MGP_129S1SvImJ_G0038682.1 mouse_genomes_project 12 111930812 111930880 + Gm25224 snoRNA snoRNA MGP_129S1SvImJ_T0011343.1 MGP_129S1SvImJ_G0009459.1 mouse_genomes_project 12 33160679 33160920 - Gm24359 misc_RNA misc_RNA MGP_129S1SvImJ_T0034614.1 MGP_129S1SvImJ_G0019656.1 mouse_genomes_project 12 29000365 29006194 + MGP_129S1SvImJ_P0034614 Fam110c protein_coding protein_coding MGP_129S1SvImJ_T0035114.1 MGP_129S1SvImJ_G0019842.1 mouse_genomes_project 12 73946950 74227917 + MGP_129S1SvImJ_P0035114 Syt16 protein_coding protein_coding MGP_129S1SvImJ_T0035115.1 MGP_129S1SvImJ_G0019842.1 mouse_genomes_project 12 74119768 74227913 + MGP_129S1SvImJ_P0035115 Syt16 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034806.1 MGP_129S1SvImJ_G0019729.1 mouse_genomes_project 12 50818276 50839647 - MGP_129S1SvImJ_P0034806 Dtd2 protein_coding protein_coding MGP_129S1SvImJ_T0034807.1 MGP_129S1SvImJ_G0019729.1 mouse_genomes_project 12 50829162 50839647 - MGP_129S1SvImJ_P0034807 Dtd2 protein_coding protein_coding MGP_129S1SvImJ_T0036134.1 MGP_129S1SvImJ_G0020174.1 mouse_genomes_project 12 115652463 115660571 + MGP_129S1SvImJ_P0036134 4930427A07Rik protein_coding protein_coding MGP_129S1SvImJ_T0036135.1 MGP_129S1SvImJ_G0020174.1 mouse_genomes_project 12 115652472 115652970 + 4930427A07Rik protein_coding retained_intron MGP_129S1SvImJ_T0036136.1 MGP_129S1SvImJ_G0020174.1 mouse_genomes_project 12 115652482 115662257 + MGP_129S1SvImJ_P0036136 4930427A07Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036137.1 MGP_129S1SvImJ_G0020174.1 mouse_genomes_project 12 115652498 115653633 + 4930427A07Rik protein_coding retained_intron MGP_129S1SvImJ_T0036138.1 MGP_129S1SvImJ_G0020174.1 mouse_genomes_project 12 115652548 115657831 + MGP_129S1SvImJ_P0036138 4930427A07Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036139.1 MGP_129S1SvImJ_G0020174.1 mouse_genomes_project 12 115653614 115660574 + 4930427A07Rik protein_coding retained_intron MGP_129S1SvImJ_T0034948.1 MGP_129S1SvImJ_G0019784.1 mouse_genomes_project 12 65998177 66824960 - MGP_129S1SvImJ_P0034948 Mdga2 protein_coding protein_coding MGP_129S1SvImJ_T0034949.1 MGP_129S1SvImJ_G0019784.1 mouse_genomes_project 12 65999245 65999668 - MGP_129S1SvImJ_P0034949 Mdga2 protein_coding protein_coding MGP_129S1SvImJ_T0034950.1 MGP_129S1SvImJ_G0019784.1 mouse_genomes_project 12 65999791 66823229 - MGP_129S1SvImJ_P0034950 Mdga2 protein_coding protein_coding MGP_129S1SvImJ_T0034951.1 MGP_129S1SvImJ_G0019784.1 mouse_genomes_project 12 66000078 66823210 - MGP_129S1SvImJ_P0034951 Mdga2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034952.1 MGP_129S1SvImJ_G0019784.1 mouse_genomes_project 12 66011701 66016878 - Mdga2 protein_coding retained_intron MGP_129S1SvImJ_T0034953.1 MGP_129S1SvImJ_G0019784.1 mouse_genomes_project 12 66158331 66168841 - Mdga2 protein_coding processed_transcript MGP_129S1SvImJ_T0034954.1 MGP_129S1SvImJ_G0019784.1 mouse_genomes_project 12 66235570 66379075 - Mdga2 protein_coding processed_transcript MGP_129S1SvImJ_T0034955.1 MGP_129S1SvImJ_G0019784.1 mouse_genomes_project 12 66794507 66824953 - Mdga2 protein_coding processed_transcript MGP_129S1SvImJ_T0034956.1 MGP_129S1SvImJ_G0019784.1 mouse_genomes_project 12 66810944 66824792 - Mdga2 protein_coding processed_transcript MGP_129S1SvImJ_T0035711.1 MGP_129S1SvImJ_G0020022.1 mouse_genomes_project 12 102402913 102525438 - MGP_129S1SvImJ_P0035711 Ccdc88c protein_coding protein_coding MGP_129S1SvImJ_T0035712.1 MGP_129S1SvImJ_G0020022.1 mouse_genomes_project 12 102402913 102525438 - MGP_129S1SvImJ_P0035712 Ccdc88c protein_coding protein_coding MGP_129S1SvImJ_T0100564.1 MGP_129S1SvImJ_G0038631.1 mouse_genomes_project 12 42313508 42313637 + Gm26326 snoRNA snoRNA MGP_129S1SvImJ_T0009871.1 MGP_129S1SvImJ_G0007987.1 mouse_genomes_project 12 111956457 111956538 + Mir758 miRNA miRNA MGP_129S1SvImJ_T0035259.1 MGP_129S1SvImJ_G0019900.1 mouse_genomes_project 12 81811560 81944820 - MGP_129S1SvImJ_P0035259 Cox16 protein_coding protein_coding MGP_129S1SvImJ_T0035260.1 MGP_129S1SvImJ_G0019900.1 mouse_genomes_project 12 81811702 81944783 - MGP_129S1SvImJ_P0035260 Cox16 protein_coding protein_coding MGP_129S1SvImJ_T0035264.1 MGP_129S1SvImJ_G0019900.1 mouse_genomes_project 12 81929309 81944830 - MGP_129S1SvImJ_P0035264 Cox16 protein_coding protein_coding MGP_129S1SvImJ_T0035265.1 MGP_129S1SvImJ_G0019900.1 mouse_genomes_project 12 81930698 81944539 - Cox16 protein_coding processed_transcript MGP_129S1SvImJ_T0035266.1 MGP_129S1SvImJ_G0019900.1 mouse_genomes_project 12 81930698 81944823 - MGP_129S1SvImJ_P0035266 Cox16 protein_coding protein_coding MGP_129S1SvImJ_T0035267.1 MGP_129S1SvImJ_G0019900.1 mouse_genomes_project 12 81930700 81944561 - Cox16 protein_coding processed_transcript MGP_129S1SvImJ_T0035268.1 MGP_129S1SvImJ_G0019900.1 mouse_genomes_project 12 81932839 81944837 - Cox16 protein_coding processed_transcript MGP_129S1SvImJ_T0035269.1 MGP_129S1SvImJ_G0019900.1 mouse_genomes_project 12 81932860 81944824 - MGP_129S1SvImJ_P0035269 Cox16 protein_coding protein_coding MGP_129S1SvImJ_T0035273.1 MGP_129S1SvImJ_G0019900.1 mouse_genomes_project 12 81939177 81944795 - Cox16 protein_coding retained_intron MGP_129S1SvImJ_T0035218.1 MGP_129S1SvImJ_G0019884.1 mouse_genomes_project 12 79586990 79813935 + MGP_129S1SvImJ_P0035218 Rad51b protein_coding protein_coding MGP_129S1SvImJ_T0035219.1 MGP_129S1SvImJ_G0019884.1 mouse_genomes_project 12 79586990 79621274 + MGP_129S1SvImJ_P0035219 Rad51b protein_coding protein_coding MGP_129S1SvImJ_T0035119.1 MGP_129S1SvImJ_G0019846.1 mouse_genomes_project 12 75320332 75405019 + MGP_129S1SvImJ_P0035119 Rhoj protein_coding protein_coding MGP_129S1SvImJ_T0035120.1 MGP_129S1SvImJ_G0019846.1 mouse_genomes_project 12 75320332 75408518 + MGP_129S1SvImJ_P0035120 Rhoj protein_coding protein_coding MGP_129S1SvImJ_T0035121.1 MGP_129S1SvImJ_G0019846.1 mouse_genomes_project 12 75320332 75402880 + MGP_129S1SvImJ_P0035121 Rhoj protein_coding protein_coding MGP_129S1SvImJ_T0035122.1 MGP_129S1SvImJ_G0019846.1 mouse_genomes_project 12 75320683 75389581 + Rhoj protein_coding retained_intron MGP_129S1SvImJ_T0035123.1 MGP_129S1SvImJ_G0019846.1 mouse_genomes_project 12 75320891 75407276 + MGP_129S1SvImJ_P0035123 Rhoj protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0011361.1 MGP_129S1SvImJ_G0009477.1 mouse_genomes_project 12 111833872 111833970 + Gm27350 misc_RNA misc_RNA MGP_129S1SvImJ_T0034790.1 MGP_129S1SvImJ_G0019720.1 mouse_genomes_project 12 49107792 49424952 - MGP_129S1SvImJ_P0034790 Prkd1 protein_coding protein_coding MGP_129S1SvImJ_T0034548.1 MGP_129S1SvImJ_G0019631.1 mouse_genomes_project 12 22347061 22362486 - MGP_129S1SvImJ_P0034548 Cys1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034549.1 MGP_129S1SvImJ_G0019631.1 mouse_genomes_project 12 22347071 22362468 - MGP_129S1SvImJ_P0034549 Cys1 protein_coding protein_coding MGP_129S1SvImJ_T0034550.1 MGP_129S1SvImJ_G0019631.1 mouse_genomes_project 12 22347071 22362468 - MGP_129S1SvImJ_P0034550 Cys1 protein_coding protein_coding MGP_129S1SvImJ_T0034551.1 MGP_129S1SvImJ_G0019631.1 mouse_genomes_project 12 22347176 22361695 - MGP_129S1SvImJ_P0034551 Cys1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034552.1 MGP_129S1SvImJ_G0019631.1 mouse_genomes_project 12 22347176 22361695 - MGP_129S1SvImJ_P0034552 Cys1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034553.1 MGP_129S1SvImJ_G0019631.1 mouse_genomes_project 12 22347777 22360609 - Cys1 protein_coding processed_transcript MGP_129S1SvImJ_T0034554.1 MGP_129S1SvImJ_G0019631.1 mouse_genomes_project 12 22347913 22361608 - MGP_129S1SvImJ_P0034554 Cys1 protein_coding protein_coding MGP_129S1SvImJ_T0034555.1 MGP_129S1SvImJ_G0019631.1 mouse_genomes_project 12 22349708 22361391 - MGP_129S1SvImJ_P0034555 Cys1 protein_coding protein_coding MGP_129S1SvImJ_T0000269.1 MGP_129S1SvImJ_G0000211.1 mouse_genomes_project 12 116941765 116942198 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0035021.1 MGP_129S1SvImJ_G0019810.1 mouse_genomes_project 12 70201896 70217303 + MGP_129S1SvImJ_P0035021 Tmx1 protein_coding protein_coding MGP_129S1SvImJ_T0035022.1 MGP_129S1SvImJ_G0019810.1 mouse_genomes_project 12 70204829 70215516 + MGP_129S1SvImJ_P0035022 Tmx1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035023.1 MGP_129S1SvImJ_G0019810.1 mouse_genomes_project 12 70208627 70209363 + Tmx1 protein_coding retained_intron MGP_129S1SvImJ_T0035405.1 MGP_129S1SvImJ_G0019935.1 mouse_genomes_project 12 85077492 85110889 - MGP_129S1SvImJ_P0035405 Entpd5 protein_coding protein_coding MGP_129S1SvImJ_T0035406.1 MGP_129S1SvImJ_G0019935.1 mouse_genomes_project 12 85077492 85110889 - MGP_129S1SvImJ_P0035406 Entpd5 protein_coding protein_coding MGP_129S1SvImJ_T0035407.1 MGP_129S1SvImJ_G0019935.1 mouse_genomes_project 12 85077510 85114455 - MGP_129S1SvImJ_P0035407 Entpd5 protein_coding protein_coding MGP_129S1SvImJ_T0035408.1 MGP_129S1SvImJ_G0019935.1 mouse_genomes_project 12 85077513 85114440 - MGP_129S1SvImJ_P0035408 Entpd5 protein_coding protein_coding MGP_129S1SvImJ_T0035409.1 MGP_129S1SvImJ_G0019935.1 mouse_genomes_project 12 85080312 85104570 - MGP_129S1SvImJ_P0035409 Entpd5 protein_coding protein_coding MGP_129S1SvImJ_T0035410.1 MGP_129S1SvImJ_G0019935.1 mouse_genomes_project 12 85080644 85104521 - MGP_129S1SvImJ_P0035410 Entpd5 protein_coding protein_coding MGP_129S1SvImJ_T0035411.1 MGP_129S1SvImJ_G0019935.1 mouse_genomes_project 12 85083991 85089316 - Entpd5 protein_coding retained_intron MGP_129S1SvImJ_T0035412.1 MGP_129S1SvImJ_G0019935.1 mouse_genomes_project 12 85108163 85114410 - Entpd5 protein_coding processed_transcript MGP_129S1SvImJ_T0099305.1 MGP_129S1SvImJ_G0037372.1 mouse_genomes_project 12 18909565 18909664 + Gm22766 snRNA snRNA MGP_129S1SvImJ_T0034776.1 MGP_129S1SvImJ_G0019713.1 mouse_genomes_project 12 43447800 43677171 - MGP_129S1SvImJ_P0034776 Stxbp6 protein_coding protein_coding MGP_129S1SvImJ_T0034777.1 MGP_129S1SvImJ_G0019713.1 mouse_genomes_project 12 43450533 43677552 - MGP_129S1SvImJ_P0034777 Stxbp6 protein_coding protein_coding MGP_129S1SvImJ_T0034778.1 MGP_129S1SvImJ_G0019713.1 mouse_genomes_project 12 43458211 43615901 - Stxbp6 protein_coding processed_transcript MGP_129S1SvImJ_T0034779.1 MGP_129S1SvImJ_G0019713.1 mouse_genomes_project 12 43501511 43677213 - MGP_129S1SvImJ_P0034779 Stxbp6 protein_coding protein_coding MGP_129S1SvImJ_T0034780.1 MGP_129S1SvImJ_G0019713.1 mouse_genomes_project 12 43615868 43677377 - MGP_129S1SvImJ_P0034780 Stxbp6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035249.1 MGP_129S1SvImJ_G0019896.1 mouse_genomes_project 12 81377153 81397071 - MGP_129S1SvImJ_P0035249 Slc10a1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0102168.1 MGP_129S1SvImJ_G0040003.1 mouse_genomes_project 12 47653758 47653998 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0034791.1 MGP_129S1SvImJ_G0019721.1 mouse_genomes_project 12 49908442 49914837 - MGP_129S1SvImJ_P0034791 Tuba1a protein_coding protein_coding MGP_129S1SvImJ_T0034663.1 MGP_129S1SvImJ_G0019672.1 mouse_genomes_project 12 31001233 31026247 + MGP_129S1SvImJ_P0034663 Sypl protein_coding protein_coding MGP_129S1SvImJ_T0034664.1 MGP_129S1SvImJ_G0019672.1 mouse_genomes_project 12 31001526 31024118 + MGP_129S1SvImJ_P0034664 Sypl protein_coding protein_coding MGP_129S1SvImJ_T0034665.1 MGP_129S1SvImJ_G0019672.1 mouse_genomes_project 12 31001589 31021365 + MGP_129S1SvImJ_P0034665 Sypl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034666.1 MGP_129S1SvImJ_G0019672.1 mouse_genomes_project 12 31001901 31014892 + Sypl protein_coding processed_transcript MGP_129S1SvImJ_T0034667.1 MGP_129S1SvImJ_G0019672.1 mouse_genomes_project 12 31012678 31017560 + Sypl protein_coding retained_intron MGP_129S1SvImJ_T0034668.1 MGP_129S1SvImJ_G0019672.1 mouse_genomes_project 12 31012758 31016659 + Sypl protein_coding processed_transcript MGP_129S1SvImJ_T0017335.1 MGP_129S1SvImJ_G0015233.1 mouse_genomes_project 12 82002482 82003800 - Gm17191 processed_transcript processed_transcript MGP_129S1SvImJ_T0009882.1 MGP_129S1SvImJ_G0007998.1 mouse_genomes_project 12 111967103 111967185 + Mir376b miRNA miRNA MGP_129S1SvImJ_T0006465.1 MGP_129S1SvImJ_G0005390.1 mouse_genomes_project 12 102587419 102596379 + D130020L05Rik lincRNA lincRNA MGP_129S1SvImJ_T0034797.1 MGP_129S1SvImJ_G0019723.1 mouse_genomes_project 12 50163601 50243355 + MGP_129S1SvImJ_P0034797 Scfd1 protein_coding protein_coding MGP_129S1SvImJ_T0034575.1 MGP_129S1SvImJ_G0019641.1 mouse_genomes_project 12 26380229 26411865 - MGP_129S1SvImJ_P0034575 Allc protein_coding protein_coding MGP_129S1SvImJ_T0034576.1 MGP_129S1SvImJ_G0019641.1 mouse_genomes_project 12 26380229 26411873 - MGP_129S1SvImJ_P0034576 Allc protein_coding protein_coding MGP_129S1SvImJ_T0034641.1 MGP_129S1SvImJ_G0019665.1 mouse_genomes_project 12 29620446 29922046 + MGP_129S1SvImJ_P0034641 Cog5 protein_coding protein_coding MGP_129S1SvImJ_T0034645.1 MGP_129S1SvImJ_G0019665.1 mouse_genomes_project 12 29731400 29910183 + MGP_129S1SvImJ_P0034645 Cog5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034689.1 MGP_129S1SvImJ_G0019680.1 mouse_genomes_project 12 32496426 32660427 - MGP_129S1SvImJ_P0034689 Hdac9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034690.1 MGP_129S1SvImJ_G0019680.1 mouse_genomes_project 12 32496439 32660535 - MGP_129S1SvImJ_P0034690 Hdac9 protein_coding protein_coding MGP_129S1SvImJ_T0000116.1 MGP_129S1SvImJ_G0000089.1 mouse_genomes_project 12 118127363 118420338 - MGP_129S1SvImJ_P0000116 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0034960.1 MGP_129S1SvImJ_G0019787.1 mouse_genomes_project 12 68845133 68846388 - MGP_129S1SvImJ_P0034960 Rpl36al protein_coding protein_coding MGP_129S1SvImJ_T0034961.1 MGP_129S1SvImJ_G0019787.1 mouse_genomes_project 12 68845140 68846415 - MGP_129S1SvImJ_P0034961 Rpl36al protein_coding protein_coding MGP_129S1SvImJ_T0034962.1 MGP_129S1SvImJ_G0019787.1 mouse_genomes_project 12 68845143 68846485 - MGP_129S1SvImJ_P0034962 Rpl36al protein_coding protein_coding MGP_129S1SvImJ_T0000133.1 MGP_129S1SvImJ_G0000102.1 mouse_genomes_project 12 118841984 118842438 - MGP_129S1SvImJ_P0000133 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0012823.1 MGP_129S1SvImJ_G0010912.1 mouse_genomes_project 12 60791782 60792310 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000082.1 MGP_129S1SvImJ_G0000064.1 mouse_genomes_project 12 116907637 116908068 - MGP_129S1SvImJ_P0000082 Ighv3-6 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000083.1 MGP_129S1SvImJ_G0000064.1 mouse_genomes_project 12 116907642 116908068 - MGP_129S1SvImJ_P0000083 Ighv3-6 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0035922.1 MGP_129S1SvImJ_G0020106.1 mouse_genomes_project 12 110694130 110830095 + MGP_129S1SvImJ_P0035922 Evl protein_coding protein_coding MGP_129S1SvImJ_T0035923.1 MGP_129S1SvImJ_G0020106.1 mouse_genomes_project 12 110694130 110830095 + MGP_129S1SvImJ_P0035923 Evl protein_coding protein_coding MGP_129S1SvImJ_T0035924.1 MGP_129S1SvImJ_G0020106.1 mouse_genomes_project 12 110745314 110830095 + MGP_129S1SvImJ_P0035924 Evl protein_coding protein_coding MGP_129S1SvImJ_T0035925.1 MGP_129S1SvImJ_G0020106.1 mouse_genomes_project 12 110775278 110830095 + MGP_129S1SvImJ_P0035925 Evl protein_coding protein_coding MGP_129S1SvImJ_T0034584.1 MGP_129S1SvImJ_G0019646.1 mouse_genomes_project 12 26529533 26592755 - MGP_129S1SvImJ_P0034584 Trappc12 protein_coding protein_coding MGP_129S1SvImJ_T0034585.1 MGP_129S1SvImJ_G0019646.1 mouse_genomes_project 12 26529533 26592696 - MGP_129S1SvImJ_P0034585 Trappc12 protein_coding protein_coding MGP_129S1SvImJ_T0034586.1 MGP_129S1SvImJ_G0019646.1 mouse_genomes_project 12 26548668 26592755 - MGP_129S1SvImJ_P0034586 Trappc12 protein_coding protein_coding MGP_129S1SvImJ_T0000277.1 MGP_129S1SvImJ_G0000219.1 mouse_genomes_project 12 117299072 117299509 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0034800.1 MGP_129S1SvImJ_G0019725.1 mouse_genomes_project 12 50407912 50498622 - MGP_129S1SvImJ_P0034800 Strn3 protein_coding protein_coding MGP_129S1SvImJ_T0034801.1 MGP_129S1SvImJ_G0019725.1 mouse_genomes_project 12 50407912 50498622 - MGP_129S1SvImJ_P0034801 Strn3 protein_coding protein_coding MGP_129S1SvImJ_T0034469.1 MGP_129S1SvImJ_G0019607.1 mouse_genomes_project 12 11422597 11427029 - MGP_129S1SvImJ_P0034469 Fam84a protein_coding protein_coding MGP_129S1SvImJ_T0009847.1 MGP_129S1SvImJ_G0007963.1 mouse_genomes_project 12 111814672 111814739 + Mir540 miRNA miRNA MGP_129S1SvImJ_T0035483.1 MGP_129S1SvImJ_G0019962.1 mouse_genomes_project 12 86380826 86424985 + MGP_129S1SvImJ_P0035483 Jdp2 protein_coding protein_coding MGP_129S1SvImJ_T0035484.1 MGP_129S1SvImJ_G0019962.1 mouse_genomes_project 12 86381137 86424984 + MGP_129S1SvImJ_P0035484 Jdp2 protein_coding protein_coding MGP_129S1SvImJ_T0035485.1 MGP_129S1SvImJ_G0019962.1 mouse_genomes_project 12 86381739 86424985 + MGP_129S1SvImJ_P0035485 Jdp2 protein_coding protein_coding MGP_129S1SvImJ_T0100555.1 MGP_129S1SvImJ_G0038622.1 mouse_genomes_project 12 26160911 26161043 + Gm25564 snoRNA snoRNA MGP_129S1SvImJ_T0009791.1 MGP_129S1SvImJ_G0007907.1 mouse_genomes_project 12 524153 524216 + Gm26050 miRNA miRNA MGP_129S1SvImJ_T0099304.1 MGP_129S1SvImJ_G0037371.1 mouse_genomes_project 12 12195515 12195619 + Gm26449 snRNA snRNA MGP_129S1SvImJ_T0100616.1 MGP_129S1SvImJ_G0038683.1 mouse_genomes_project 12 113934429 113934556 + Snora28 snoRNA snoRNA MGP_129S1SvImJ_T0017331.1 MGP_129S1SvImJ_G0015229.1 mouse_genomes_project 12 31420880 31458524 - Atxn7l1os2 processed_transcript processed_transcript MGP_129S1SvImJ_T0100608.1 MGP_129S1SvImJ_G0038675.1 mouse_genomes_project 12 111921077 111921152 + Gm23736 snoRNA snoRNA MGP_129S1SvImJ_T0035225.1 MGP_129S1SvImJ_G0019887.1 mouse_genomes_project 12 80695204 80796623 - MGP_129S1SvImJ_P0035225 Dcaf5 protein_coding protein_coding MGP_129S1SvImJ_T0009921.1 MGP_129S1SvImJ_G0008037.1 mouse_genomes_project 12 119104374 119104430 - Gm23190 miRNA miRNA MGP_129S1SvImJ_T0035262.1 MGP_129S1SvImJ_G0019902.1 mouse_genomes_project 12 81880239 81882743 - MGP_129S1SvImJ_P0035262 Adam4 protein_coding protein_coding MGP_129S1SvImJ_T0036108.1 MGP_129S1SvImJ_G0020167.1 mouse_genomes_project 12 115459294 115461743 + MGP_129S1SvImJ_P0036108 Btbd6 protein_coding protein_coding MGP_129S1SvImJ_T0036109.1 MGP_129S1SvImJ_G0020167.1 mouse_genomes_project 12 115459375 115461743 + MGP_129S1SvImJ_P0036109 Btbd6 protein_coding protein_coding MGP_129S1SvImJ_T0000112.1 MGP_129S1SvImJ_G0000085.1 mouse_genomes_project 12 117891433 118420338 - MGP_129S1SvImJ_P0000112 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0036024.1 MGP_129S1SvImJ_G0020136.1 mouse_genomes_project 12 113973575 114056119 + MGP_129S1SvImJ_P0036024 Mark3 protein_coding protein_coding MGP_129S1SvImJ_T0036025.1 MGP_129S1SvImJ_G0020136.1 mouse_genomes_project 12 113973575 114056119 + MGP_129S1SvImJ_P0036025 Mark3 protein_coding protein_coding MGP_129S1SvImJ_T0036026.1 MGP_129S1SvImJ_G0020136.1 mouse_genomes_project 12 114014430 114055507 + MGP_129S1SvImJ_P0036026 Mark3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035107.1 MGP_129S1SvImJ_G0019839.1 mouse_genomes_project 12 73504921 73709907 + MGP_129S1SvImJ_P0035107 Prkch protein_coding protein_coding MGP_129S1SvImJ_T0035108.1 MGP_129S1SvImJ_G0019839.1 mouse_genomes_project 12 73504967 73691127 + MGP_129S1SvImJ_P0035108 Prkch protein_coding protein_coding MGP_129S1SvImJ_T0100584.1 MGP_129S1SvImJ_G0038651.1 mouse_genomes_project 12 83334153 83334290 - Gm22149 snoRNA snoRNA MGP_129S1SvImJ_T0035958.1 MGP_129S1SvImJ_G0020116.1 mouse_genomes_project 12 112560352 112562382 + MGP_129S1SvImJ_P0035958 protein_coding protein_coding MGP_129S1SvImJ_T0035959.1 MGP_129S1SvImJ_G0020116.1 mouse_genomes_project 12 112560544 112561993 + MGP_129S1SvImJ_P0035959 protein_coding protein_coding MGP_129S1SvImJ_T0036022.1 MGP_129S1SvImJ_G0020135.1 mouse_genomes_project 12 113931163 113941849 + MGP_129S1SvImJ_P0036022 Eif5 protein_coding protein_coding MGP_129S1SvImJ_T0036023.1 MGP_129S1SvImJ_G0020135.1 mouse_genomes_project 12 113931781 113938819 + MGP_129S1SvImJ_P0036023 Eif5 protein_coding protein_coding MGP_129S1SvImJ_T0035754.1 MGP_129S1SvImJ_G0020037.1 mouse_genomes_project 12 104400145 104401577 - MGP_129S1SvImJ_P0035754 Moap1 protein_coding protein_coding MGP_129S1SvImJ_T0035755.1 MGP_129S1SvImJ_G0020037.1 mouse_genomes_project 12 104400145 104401561 - MGP_129S1SvImJ_P0035755 Moap1 protein_coding protein_coding MGP_129S1SvImJ_T0099319.1 MGP_129S1SvImJ_G0037386.1 mouse_genomes_project 12 60028237 60028344 + Gm23059 snRNA snRNA MGP_129S1SvImJ_T0036008.1 MGP_129S1SvImJ_G0020131.1 mouse_genomes_project 12 113791968 113798930 + MGP_129S1SvImJ_P0036008 A230065H16Rik protein_coding protein_coding MGP_129S1SvImJ_T0009900.1 MGP_129S1SvImJ_G0008016.1 mouse_genomes_project 12 111986046 111986136 + Mir541 miRNA miRNA MGP_129S1SvImJ_T0100573.1 MGP_129S1SvImJ_G0038640.1 mouse_genomes_project 12 58881828 58881959 + Gm22673 snoRNA snoRNA MGP_129S1SvImJ_T0000271.1 MGP_129S1SvImJ_G0000213.1 mouse_genomes_project 12 116967825 116968116 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0034767.1 MGP_129S1SvImJ_G0019709.1 mouse_genomes_project 12 40903954 40905550 - MGP_129S1SvImJ_P0034767 Gm3604 protein_coding protein_coding MGP_129S1SvImJ_T0034705.1 MGP_129S1SvImJ_G0019688.1 mouse_genomes_project 12 34311578 34315153 + MGP_129S1SvImJ_P0034705 Gm5434 protein_coding protein_coding MGP_129S1SvImJ_T0000084.1 MGP_129S1SvImJ_G0000065.1 mouse_genomes_project 12 116920014 116920443 - MGP_129S1SvImJ_P0000084 Ighv9-4 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000085.1 MGP_129S1SvImJ_G0000065.1 mouse_genomes_project 12 116920014 116920308 - MGP_129S1SvImJ_P0000085 Ighv9-4 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0102180.1 MGP_129S1SvImJ_G0040014.1 mouse_genomes_project 12 105952903 105956020 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0009840.1 MGP_129S1SvImJ_G0007956.1 mouse_genomes_project 12 111526509 111526576 - Gm25297 miRNA miRNA MGP_129S1SvImJ_T0034456.1 MGP_129S1SvImJ_G0019597.1 mouse_genomes_project 12 8396412 8396979 - MGP_129S1SvImJ_P0034456 Msgn1 protein_coding protein_coding MGP_129S1SvImJ_T0035289.1 MGP_129S1SvImJ_G0019909.1 mouse_genomes_project 12 82709596 82999115 + MGP_129S1SvImJ_P0035289 Sipa1l1 protein_coding protein_coding MGP_129S1SvImJ_T0035290.1 MGP_129S1SvImJ_G0019909.1 mouse_genomes_project 12 82853684 82999115 + MGP_129S1SvImJ_P0035290 Sipa1l1 protein_coding protein_coding MGP_129S1SvImJ_T0098476.1 MGP_129S1SvImJ_G0036561.1 mouse_genomes_project 12 86509808 86509927 - n-R5s64 rRNA rRNA MGP_129S1SvImJ_T0099033.1 MGP_129S1SvImJ_G0037104.1 mouse_genomes_project 12 72813088 72833091 + Gm26709 sense_overlapping sense_overlapping MGP_129S1SvImJ_T0034472.1 MGP_129S1SvImJ_G0019609.1 mouse_genomes_project 12 13929268 13984002 - MGP_129S1SvImJ_P0034472 Lpin1 protein_coding protein_coding MGP_129S1SvImJ_T0034473.1 MGP_129S1SvImJ_G0019609.1 mouse_genomes_project 12 13929268 13984002 - MGP_129S1SvImJ_P0034473 Lpin1 protein_coding protein_coding MGP_129S1SvImJ_T0035772.1 MGP_129S1SvImJ_G0020044.1 mouse_genomes_project 12 104873158 104879145 - Prima1 protein_coding processed_transcript MGP_129S1SvImJ_T0035773.1 MGP_129S1SvImJ_G0020044.1 mouse_genomes_project 12 104873158 104918394 - MGP_129S1SvImJ_P0035773 Prima1 protein_coding protein_coding MGP_129S1SvImJ_T0035774.1 MGP_129S1SvImJ_G0020044.1 mouse_genomes_project 12 104873158 104918390 - MGP_129S1SvImJ_P0035774 Prima1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035775.1 MGP_129S1SvImJ_G0020044.1 mouse_genomes_project 12 104873518 104918372 - MGP_129S1SvImJ_P0035775 Prima1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035776.1 MGP_129S1SvImJ_G0020044.1 mouse_genomes_project 12 104911882 104912268 - Prima1 protein_coding processed_transcript MGP_129S1SvImJ_T0098736.1 MGP_129S1SvImJ_G0036821.1 mouse_genomes_project 12 106863128 106863403 - Scarna13 scaRNA scaRNA MGP_129S1SvImJ_T0034363.1 MGP_129S1SvImJ_G0019562.1 mouse_genomes_project 12 813270 894455 - MGP_129S1SvImJ_P0034363 Efr3b protein_coding protein_coding MGP_129S1SvImJ_T0099318.1 MGP_129S1SvImJ_G0037385.1 mouse_genomes_project 12 58231286 58231477 + Gm22973 snRNA snRNA MGP_129S1SvImJ_T0009857.1 MGP_129S1SvImJ_G0007973.1 mouse_genomes_project 12 111825350 111825412 + Mir136 miRNA miRNA MGP_129S1SvImJ_T0036072.1 MGP_129S1SvImJ_G0020149.1 mouse_genomes_project 12 114579672 114615176 + MGP_129S1SvImJ_P0036072 Kif26a protein_coding protein_coding MGP_129S1SvImJ_T0036073.1 MGP_129S1SvImJ_G0020149.1 mouse_genomes_project 12 114612582 114613962 + Kif26a protein_coding processed_transcript MGP_129S1SvImJ_T0035170.1 MGP_129S1SvImJ_G0019863.1 mouse_genomes_project 12 76889780 76909421 + MGP_129S1SvImJ_P0035170 Churc1 protein_coding protein_coding MGP_129S1SvImJ_T0035173.1 MGP_129S1SvImJ_G0019863.1 mouse_genomes_project 12 76892709 76900138 + Churc1 protein_coding retained_intron MGP_129S1SvImJ_T0036159.1 MGP_129S1SvImJ_G0020183.1 mouse_genomes_project 12 119353461 119644536 + Ptprn2 protein_coding processed_transcript MGP_129S1SvImJ_T0036160.1 MGP_129S1SvImJ_G0020183.1 mouse_genomes_project 12 119353470 120009646 + Ptprn2 protein_coding processed_transcript MGP_129S1SvImJ_T0036161.1 MGP_129S1SvImJ_G0020183.1 mouse_genomes_project 12 119353470 120170299 + MGP_129S1SvImJ_P0036161 Ptprn2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036162.1 MGP_129S1SvImJ_G0020183.1 mouse_genomes_project 12 119353511 119721635 + Ptprn2 protein_coding retained_intron MGP_129S1SvImJ_T0036163.1 MGP_129S1SvImJ_G0020183.1 mouse_genomes_project 12 119353574 120170243 + MGP_129S1SvImJ_P0036163 Ptprn2 protein_coding protein_coding MGP_129S1SvImJ_T0100601.1 MGP_129S1SvImJ_G0038668.1 mouse_genomes_project 12 111887079 111887151 + Gm23508 snoRNA snoRNA MGP_129S1SvImJ_T0000123.1 MGP_129S1SvImJ_G0000095.1 mouse_genomes_project 12 118781662 118782094 - MGP_129S1SvImJ_P0000123 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0034578.1 MGP_129S1SvImJ_G0019643.1 mouse_genomes_project 12 26465731 26471184 - MGP_129S1SvImJ_P0034578 Rps7 protein_coding protein_coding MGP_129S1SvImJ_T0034579.1 MGP_129S1SvImJ_G0019643.1 mouse_genomes_project 12 26465960 26470558 - MGP_129S1SvImJ_P0034579 Rps7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0009859.1 MGP_129S1SvImJ_G0007975.1 mouse_genomes_project 12 111841812 111841932 + Mir1188 miRNA miRNA MGP_129S1SvImJ_T0035192.1 MGP_129S1SvImJ_G0019869.1 mouse_genomes_project 12 77835864 77837694 - MGP_129S1SvImJ_P0035192 protein_coding protein_coding MGP_129S1SvImJ_T0034931.1 MGP_129S1SvImJ_G0019774.1 mouse_genomes_project 12 63935183 63938785 - MGP_129S1SvImJ_P0034931 Fscb protein_coding protein_coding MGP_129S1SvImJ_T0009834.1 MGP_129S1SvImJ_G0007950.1 mouse_genomes_project 12 104650428 104650563 + Gm44324 miRNA miRNA MGP_129S1SvImJ_T0102179.1 MGP_129S1SvImJ_G0040013.1 mouse_genomes_project 12 105937096 105942090 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0035418.1 MGP_129S1SvImJ_G0019939.1 mouse_genomes_project 12 85161396 85174793 + MGP_129S1SvImJ_P0035418 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0035419.1 MGP_129S1SvImJ_G0019939.1 mouse_genomes_project 12 85161396 85174450 + MGP_129S1SvImJ_P0035419 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0000065.1 MGP_129S1SvImJ_G0000052.1 mouse_genomes_project 12 116500263 116500726 - MGP_129S1SvImJ_P0000065 Ighv7-2 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000066.1 MGP_129S1SvImJ_G0000052.1 mouse_genomes_project 12 116500263 116500726 - MGP_129S1SvImJ_P0000066 Ighv7-2 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0036047.1 MGP_129S1SvImJ_G0020142.1 mouse_genomes_project 12 114222008 114234159 - MGP_129S1SvImJ_P0036047 Xrcc3 protein_coding protein_coding MGP_129S1SvImJ_T0036048.1 MGP_129S1SvImJ_G0020142.1 mouse_genomes_project 12 114222008 114231010 - MGP_129S1SvImJ_P0036048 Xrcc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036049.1 MGP_129S1SvImJ_G0020142.1 mouse_genomes_project 12 114223723 114231010 - Xrcc3 protein_coding processed_transcript MGP_129S1SvImJ_T0036050.1 MGP_129S1SvImJ_G0020142.1 mouse_genomes_project 12 114223789 114228791 - Xrcc3 protein_coding retained_intron MGP_129S1SvImJ_T0036051.1 MGP_129S1SvImJ_G0020142.1 mouse_genomes_project 12 114223884 114234191 - Xrcc3 protein_coding processed_transcript MGP_129S1SvImJ_T0036053.1 MGP_129S1SvImJ_G0020142.1 mouse_genomes_project 12 114228574 114231030 - Xrcc3 protein_coding processed_transcript MGP_129S1SvImJ_T0036054.1 MGP_129S1SvImJ_G0020142.1 mouse_genomes_project 12 114228709 114234170 - Xrcc3 protein_coding processed_transcript MGP_129S1SvImJ_T0036055.1 MGP_129S1SvImJ_G0020142.1 mouse_genomes_project 12 114230312 114231030 - Xrcc3 protein_coding processed_transcript MGP_129S1SvImJ_T0034490.1 MGP_129S1SvImJ_G0019614.1 mouse_genomes_project 12 14395535 14407926 - Pqlc3 protein_coding retained_intron MGP_129S1SvImJ_T0034491.1 MGP_129S1SvImJ_G0019614.1 mouse_genomes_project 12 14395535 14408012 - MGP_129S1SvImJ_P0034491 Pqlc3 protein_coding protein_coding MGP_129S1SvImJ_T0034492.1 MGP_129S1SvImJ_G0019614.1 mouse_genomes_project 12 14400865 14407919 - MGP_129S1SvImJ_P0034492 Pqlc3 protein_coding protein_coding MGP_129S1SvImJ_T0034493.1 MGP_129S1SvImJ_G0019614.1 mouse_genomes_project 12 14401414 14407920 - Pqlc3 protein_coding processed_transcript MGP_129S1SvImJ_T0034494.1 MGP_129S1SvImJ_G0019614.1 mouse_genomes_project 12 14401559 14408010 - MGP_129S1SvImJ_P0034494 Pqlc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034495.1 MGP_129S1SvImJ_G0019614.1 mouse_genomes_project 12 14403546 14408302 - Pqlc3 protein_coding processed_transcript MGP_129S1SvImJ_T0034496.1 MGP_129S1SvImJ_G0019614.1 mouse_genomes_project 12 14403546 14408302 - Pqlc3 protein_coding processed_transcript MGP_129S1SvImJ_T0000126.1 MGP_129S1SvImJ_G0000098.1 mouse_genomes_project 12 118781662 118782129 - MGP_129S1SvImJ_P0000126 Ighv1-82 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000128.1 MGP_129S1SvImJ_G0000098.1 mouse_genomes_project 12 118781662 118781955 - MGP_129S1SvImJ_P0000128 Ighv1-82 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0034843.1 MGP_129S1SvImJ_G0019747.1 mouse_genomes_project 12 54336719 54424481 + MGP_129S1SvImJ_P0034843 1110008L16Rik protein_coding protein_coding MGP_129S1SvImJ_T0034844.1 MGP_129S1SvImJ_G0019747.1 mouse_genomes_project 12 54339779 54424557 + MGP_129S1SvImJ_P0034844 1110008L16Rik protein_coding protein_coding MGP_129S1SvImJ_T0034845.1 MGP_129S1SvImJ_G0019747.1 mouse_genomes_project 12 54339892 54346035 + 1110008L16Rik protein_coding retained_intron MGP_129S1SvImJ_T0034846.1 MGP_129S1SvImJ_G0019747.1 mouse_genomes_project 12 54340428 54424574 + MGP_129S1SvImJ_P0034846 1110008L16Rik protein_coding protein_coding MGP_129S1SvImJ_T0035445.1 MGP_129S1SvImJ_G0019949.1 mouse_genomes_project 12 85721520 85736936 + MGP_129S1SvImJ_P0035445 Fcf1 protein_coding protein_coding MGP_129S1SvImJ_T0035446.1 MGP_129S1SvImJ_G0019949.1 mouse_genomes_project 12 85721576 85735846 + MGP_129S1SvImJ_P0035446 Fcf1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035447.1 MGP_129S1SvImJ_G0019949.1 mouse_genomes_project 12 85721604 85736924 + MGP_129S1SvImJ_P0035447 Fcf1 protein_coding protein_coding MGP_129S1SvImJ_T0035448.1 MGP_129S1SvImJ_G0019949.1 mouse_genomes_project 12 85732754 85736930 + Fcf1 protein_coding retained_intron MGP_129S1SvImJ_T0035756.1 MGP_129S1SvImJ_G0020038.1 mouse_genomes_project 12 104401675 104405477 + MGP_129S1SvImJ_P0035756 Tmem251 protein_coding protein_coding MGP_129S1SvImJ_T0036010.1 MGP_129S1SvImJ_G0020133.1 mouse_genomes_project 12 113829263 113841806 + MGP_129S1SvImJ_P0036010 Tnfaip2 protein_coding protein_coding MGP_129S1SvImJ_T0036011.1 MGP_129S1SvImJ_G0020133.1 mouse_genomes_project 12 113829452 113841466 + MGP_129S1SvImJ_P0036011 Tnfaip2 protein_coding protein_coding MGP_129S1SvImJ_T0036012.1 MGP_129S1SvImJ_G0020133.1 mouse_genomes_project 12 113829456 113841466 + Tnfaip2 protein_coding retained_intron MGP_129S1SvImJ_T0036013.1 MGP_129S1SvImJ_G0020133.1 mouse_genomes_project 12 113829456 113835382 + MGP_129S1SvImJ_P0036013 Tnfaip2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036014.1 MGP_129S1SvImJ_G0020133.1 mouse_genomes_project 12 113831118 113832306 + MGP_129S1SvImJ_P0036014 Tnfaip2 protein_coding protein_coding MGP_129S1SvImJ_T0036015.1 MGP_129S1SvImJ_G0020133.1 mouse_genomes_project 12 113831792 113840613 + MGP_129S1SvImJ_P0036015 Tnfaip2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036016.1 MGP_129S1SvImJ_G0020133.1 mouse_genomes_project 12 113832878 113840613 + MGP_129S1SvImJ_P0036016 Tnfaip2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036017.1 MGP_129S1SvImJ_G0020133.1 mouse_genomes_project 12 113834929 113836106 + Tnfaip2 protein_coding retained_intron MGP_129S1SvImJ_T0036018.1 MGP_129S1SvImJ_G0020133.1 mouse_genomes_project 12 113836305 113838257 + Tnfaip2 protein_coding retained_intron MGP_129S1SvImJ_T0036019.1 MGP_129S1SvImJ_G0020133.1 mouse_genomes_project 12 113836660 113840547 + MGP_129S1SvImJ_P0036019 Tnfaip2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036020.1 MGP_129S1SvImJ_G0020133.1 mouse_genomes_project 12 113837306 113840414 + Tnfaip2 protein_coding retained_intron MGP_129S1SvImJ_T0000110.1 MGP_129S1SvImJ_G0000083.1 mouse_genomes_project 12 117891433 118420387 - MGP_129S1SvImJ_P0000110 Ighv1-62-3 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0035830.1 MGP_129S1SvImJ_G0020065.1 mouse_genomes_project 12 105781977 105797989 - MGP_129S1SvImJ_P0035830 Serpina12 protein_coding protein_coding MGP_129S1SvImJ_T0035803.1 MGP_129S1SvImJ_G0020053.1 mouse_genomes_project 12 105216277 105309436 + MGP_129S1SvImJ_P0035803 Ppp4r4 protein_coding protein_coding MGP_129S1SvImJ_T0035804.1 MGP_129S1SvImJ_G0020053.1 mouse_genomes_project 12 105216546 105308509 + MGP_129S1SvImJ_P0035804 Ppp4r4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035805.1 MGP_129S1SvImJ_G0020053.1 mouse_genomes_project 12 105216629 105308437 + MGP_129S1SvImJ_P0035805 Ppp4r4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035806.1 MGP_129S1SvImJ_G0020053.1 mouse_genomes_project 12 105243841 105308671 + MGP_129S1SvImJ_P0035806 Ppp4r4 protein_coding protein_coding MGP_129S1SvImJ_T0035807.1 MGP_129S1SvImJ_G0020053.1 mouse_genomes_project 12 105268449 105278651 + MGP_129S1SvImJ_P0035807 Ppp4r4 protein_coding protein_coding MGP_129S1SvImJ_T0035808.1 MGP_129S1SvImJ_G0020053.1 mouse_genomes_project 12 105289705 105294452 + MGP_129S1SvImJ_P0035808 Ppp4r4 protein_coding protein_coding MGP_129S1SvImJ_T0003411.1 MGP_129S1SvImJ_G0003133.1 mouse_genomes_project 12 38611231 38613681 + Gm17056 antisense antisense MGP_129S1SvImJ_T0035198.1 MGP_129S1SvImJ_G0019873.1 mouse_genomes_project 12 79118075 79137803 - MGP_129S1SvImJ_P0035198 Atp6v1d protein_coding protein_coding MGP_129S1SvImJ_T0035877.1 MGP_129S1SvImJ_G0020094.1 mouse_genomes_project 12 107565666 107587019 + MGP_129S1SvImJ_P0035877 Gskip protein_coding protein_coding MGP_129S1SvImJ_T0036021.1 MGP_129S1SvImJ_G0020134.1 mouse_genomes_project 12 113872694 113873907 - MGP_129S1SvImJ_P0036021 Gm266 protein_coding protein_coding MGP_129S1SvImJ_T0099335.1 MGP_129S1SvImJ_G0037402.1 mouse_genomes_project 12 87513801 87513908 + Gm22004 snRNA snRNA MGP_129S1SvImJ_T0035802.1 MGP_129S1SvImJ_G0020052.1 mouse_genomes_project 12 105130944 105132711 - MGP_129S1SvImJ_P0035802 protein_coding protein_coding MGP_129S1SvImJ_T0009796.1 MGP_129S1SvImJ_G0007912.1 mouse_genomes_project 12 26516889 26516954 + Mir6937 miRNA miRNA MGP_129S1SvImJ_T0009907.1 MGP_129S1SvImJ_G0008023.1 mouse_genomes_project 12 112559539 112559621 - Mir1247 miRNA miRNA MGP_129S1SvImJ_T0035165.1 MGP_129S1SvImJ_G0019861.1 mouse_genomes_project 12 76666030 76711990 + MGP_129S1SvImJ_P0035165 Plekhg3 protein_coding protein_coding MGP_129S1SvImJ_T0035166.1 MGP_129S1SvImJ_G0019861.1 mouse_genomes_project 12 76679587 76711369 + MGP_129S1SvImJ_P0035166 Plekhg3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0036084.1 MGP_129S1SvImJ_G0020156.1 mouse_genomes_project 12 115114615 115140633 - MGP_129S1SvImJ_P0036084 Akt1 protein_coding protein_coding MGP_129S1SvImJ_T0036085.1 MGP_129S1SvImJ_G0020156.1 mouse_genomes_project 12 115115467 115132376 - MGP_129S1SvImJ_P0036085 Akt1 protein_coding protein_coding MGP_129S1SvImJ_T0036086.1 MGP_129S1SvImJ_G0020156.1 mouse_genomes_project 12 115116637 115117768 - Akt1 protein_coding retained_intron MGP_129S1SvImJ_T0036087.1 MGP_129S1SvImJ_G0020156.1 mouse_genomes_project 12 115117888 115120432 - Akt1 protein_coding retained_intron MGP_129S1SvImJ_T0036088.1 MGP_129S1SvImJ_G0020156.1 mouse_genomes_project 12 115118356 115119937 - Akt1 protein_coding retained_intron MGP_129S1SvImJ_T0036089.1 MGP_129S1SvImJ_G0020156.1 mouse_genomes_project 12 115119219 115141241 - MGP_129S1SvImJ_P0036089 Akt1 protein_coding protein_coding MGP_129S1SvImJ_T0036090.1 MGP_129S1SvImJ_G0020156.1 mouse_genomes_project 12 115119954 115137244 - MGP_129S1SvImJ_P0036090 Akt1 protein_coding protein_coding MGP_129S1SvImJ_T0036091.1 MGP_129S1SvImJ_G0020156.1 mouse_genomes_project 12 115120060 115128926 - Akt1 protein_coding processed_transcript MGP_129S1SvImJ_T0003406.1 MGP_129S1SvImJ_G0003128.1 mouse_genomes_project 12 700410 703362 - Dnmt3aos antisense antisense MGP_129S1SvImJ_T0000885.1 MGP_129S1SvImJ_G0000818.1 mouse_genomes_project 12 72818113 72818929 + TEC TEC MGP_129S1SvImJ_T0035007.1 MGP_129S1SvImJ_G0019807.1 mouse_genomes_project 12 69883952 69914290 + Abhd12b protein_coding retained_intron MGP_129S1SvImJ_T0035008.1 MGP_129S1SvImJ_G0019807.1 mouse_genomes_project 12 69883967 69914830 + MGP_129S1SvImJ_P0035008 Abhd12b protein_coding protein_coding MGP_129S1SvImJ_T0035009.1 MGP_129S1SvImJ_G0019807.1 mouse_genomes_project 12 69883967 69914830 + MGP_129S1SvImJ_P0035009 Abhd12b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035010.1 MGP_129S1SvImJ_G0019807.1 mouse_genomes_project 12 69883967 69914830 + MGP_129S1SvImJ_P0035010 Abhd12b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035011.1 MGP_129S1SvImJ_G0019807.1 mouse_genomes_project 12 69883967 69914830 + MGP_129S1SvImJ_P0035011 Abhd12b protein_coding protein_coding MGP_129S1SvImJ_T0035012.1 MGP_129S1SvImJ_G0019807.1 mouse_genomes_project 12 69912990 69914290 + Abhd12b protein_coding retained_intron MGP_129S1SvImJ_T0035493.1 MGP_129S1SvImJ_G0019966.1 mouse_genomes_project 12 86632291 86666408 + MGP_129S1SvImJ_P0035493 Ttll5 protein_coding protein_coding MGP_129S1SvImJ_T0035494.1 MGP_129S1SvImJ_G0019966.1 mouse_genomes_project 12 86632305 86702839 + MGP_129S1SvImJ_P0035494 Ttll5 protein_coding protein_coding MGP_129S1SvImJ_T0035495.1 MGP_129S1SvImJ_G0019966.1 mouse_genomes_project 12 86632339 86692544 + MGP_129S1SvImJ_P0035495 Ttll5 protein_coding protein_coding MGP_129S1SvImJ_T0035496.1 MGP_129S1SvImJ_G0019966.1 mouse_genomes_project 12 86632342 86865217 + MGP_129S1SvImJ_P0035496 Ttll5 protein_coding protein_coding MGP_129S1SvImJ_T0035497.1 MGP_129S1SvImJ_G0019966.1 mouse_genomes_project 12 86632600 86825763 + MGP_129S1SvImJ_P0035497 Ttll5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035498.1 MGP_129S1SvImJ_G0019966.1 mouse_genomes_project 12 86632601 86864665 + MGP_129S1SvImJ_P0035498 Ttll5 protein_coding protein_coding MGP_129S1SvImJ_T0035499.1 MGP_129S1SvImJ_G0019966.1 mouse_genomes_project 12 86632610 86678197 + Ttll5 protein_coding processed_transcript MGP_129S1SvImJ_T0035500.1 MGP_129S1SvImJ_G0019966.1 mouse_genomes_project 12 86632610 86865216 + MGP_129S1SvImJ_P0035500 Ttll5 protein_coding protein_coding MGP_129S1SvImJ_T0035501.1 MGP_129S1SvImJ_G0019966.1 mouse_genomes_project 12 86632617 86651661 + MGP_129S1SvImJ_P0035501 Ttll5 protein_coding protein_coding MGP_129S1SvImJ_T0035502.1 MGP_129S1SvImJ_G0019966.1 mouse_genomes_project 12 86632653 86653556 + Ttll5 protein_coding retained_intron MGP_129S1SvImJ_T0035503.1 MGP_129S1SvImJ_G0019966.1 mouse_genomes_project 12 86632653 86657191 + MGP_129S1SvImJ_P0035503 Ttll5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035504.1 MGP_129S1SvImJ_G0019966.1 mouse_genomes_project 12 86632707 86865216 + MGP_129S1SvImJ_P0035504 Ttll5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035505.1 MGP_129S1SvImJ_G0019966.1 mouse_genomes_project 12 86634116 86864666 + MGP_129S1SvImJ_P0035505 Ttll5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035506.1 MGP_129S1SvImJ_G0019966.1 mouse_genomes_project 12 86687126 86700293 + Ttll5 protein_coding retained_intron MGP_129S1SvImJ_T0035507.1 MGP_129S1SvImJ_G0019966.1 mouse_genomes_project 12 86721705 86739061 + MGP_129S1SvImJ_P0035507 Ttll5 protein_coding protein_coding MGP_129S1SvImJ_T0035508.1 MGP_129S1SvImJ_G0019966.1 mouse_genomes_project 12 86726924 86865216 + MGP_129S1SvImJ_P0035508 Ttll5 protein_coding protein_coding MGP_129S1SvImJ_T0035509.1 MGP_129S1SvImJ_G0019966.1 mouse_genomes_project 12 86732129 86822511 + MGP_129S1SvImJ_P0035509 Ttll5 protein_coding protein_coding MGP_129S1SvImJ_T0035510.1 MGP_129S1SvImJ_G0019966.1 mouse_genomes_project 12 86741907 86865216 + MGP_129S1SvImJ_P0035510 Ttll5 protein_coding protein_coding MGP_129S1SvImJ_T0035511.1 MGP_129S1SvImJ_G0019966.1 mouse_genomes_project 12 86750890 86874020 + MGP_129S1SvImJ_P0035511 Ttll5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0100556.1 MGP_129S1SvImJ_G0038623.1 mouse_genomes_project 12 28983381 28983514 + Gm25408 snoRNA snoRNA MGP_129S1SvImJ_T0034824.1 MGP_129S1SvImJ_G0019739.1 mouse_genomes_project 12 53807125 53811186 - MGP_129S1SvImJ_P0034824 Cfl2 protein_coding protein_coding MGP_129S1SvImJ_T0034454.1 MGP_129S1SvImJ_G0019596.1 mouse_genomes_project 12 8277040 8337429 - MGP_129S1SvImJ_P0034454 Kcns3 protein_coding protein_coding MGP_129S1SvImJ_T0034455.1 MGP_129S1SvImJ_G0019596.1 mouse_genomes_project 12 8277040 8336960 - MGP_129S1SvImJ_P0034455 Kcns3 protein_coding protein_coding MGP_129S1SvImJ_T0034706.1 MGP_129S1SvImJ_G0019689.1 mouse_genomes_project 12 34315169 34380780 - MGP_129S1SvImJ_P0034706 Bzw2 protein_coding protein_coding MGP_129S1SvImJ_T0000896.1 MGP_129S1SvImJ_G0000829.1 mouse_genomes_project 12 115161381 115163984 - TEC TEC MGP_129S1SvImJ_T0035129.1 MGP_129S1SvImJ_G0019851.1 mouse_genomes_project 12 75871203 75935115 + MGP_129S1SvImJ_P0035129 Syne2 protein_coding protein_coding MGP_129S1SvImJ_T0035130.1 MGP_129S1SvImJ_G0019851.1 mouse_genomes_project 12 75871386 76186104 + MGP_129S1SvImJ_P0035130 Syne2 protein_coding protein_coding MGP_129S1SvImJ_T0035131.1 MGP_129S1SvImJ_G0019851.1 mouse_genomes_project 12 75871386 76182030 + MGP_129S1SvImJ_P0035131 Syne2 protein_coding protein_coding MGP_129S1SvImJ_T0035132.1 MGP_129S1SvImJ_G0019851.1 mouse_genomes_project 12 75871391 75947782 + Syne2 protein_coding retained_intron MGP_129S1SvImJ_T0035133.1 MGP_129S1SvImJ_G0019851.1 mouse_genomes_project 12 75871397 75967529 + MGP_129S1SvImJ_P0035133 Syne2 protein_coding protein_coding MGP_129S1SvImJ_T0035134.1 MGP_129S1SvImJ_G0019851.1 mouse_genomes_project 12 75871418 75964556 + Syne2 protein_coding retained_intron MGP_129S1SvImJ_T0035135.1 MGP_129S1SvImJ_G0019851.1 mouse_genomes_project 12 75905619 75934937 + MGP_129S1SvImJ_P0035135 Syne2 protein_coding protein_coding MGP_129S1SvImJ_T0035136.1 MGP_129S1SvImJ_G0019851.1 mouse_genomes_project 12 75967866 75972534 + Syne2 protein_coding retained_intron MGP_129S1SvImJ_T0035137.1 MGP_129S1SvImJ_G0019851.1 mouse_genomes_project 12 76088536 76094051 + MGP_129S1SvImJ_P0035137 Syne2 protein_coding protein_coding MGP_129S1SvImJ_T0035138.1 MGP_129S1SvImJ_G0019851.1 mouse_genomes_project 12 76097873 76182050 + MGP_129S1SvImJ_P0035138 Syne2 protein_coding protein_coding MGP_129S1SvImJ_T0035139.1 MGP_129S1SvImJ_G0019851.1 mouse_genomes_project 12 76114886 76182030 + MGP_129S1SvImJ_P0035139 Syne2 protein_coding protein_coding MGP_129S1SvImJ_T0035140.1 MGP_129S1SvImJ_G0019851.1 mouse_genomes_project 12 76126111 76132956 + Syne2 protein_coding retained_intron MGP_129S1SvImJ_T0035141.1 MGP_129S1SvImJ_G0019851.1 mouse_genomes_project 12 76139582 76163279 + MGP_129S1SvImJ_P0035141 Syne2 protein_coding protein_coding MGP_129S1SvImJ_T0035142.1 MGP_129S1SvImJ_G0019851.1 mouse_genomes_project 12 76150361 76163889 + MGP_129S1SvImJ_P0035142 Syne2 protein_coding protein_coding MGP_129S1SvImJ_T0035143.1 MGP_129S1SvImJ_G0019851.1 mouse_genomes_project 12 76150644 76166823 + MGP_129S1SvImJ_P0035143 Syne2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035144.1 MGP_129S1SvImJ_G0019851.1 mouse_genomes_project 12 76156489 76186104 + MGP_129S1SvImJ_P0035144 Syne2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035145.1 MGP_129S1SvImJ_G0019851.1 mouse_genomes_project 12 76171764 76177122 + Syne2 protein_coding retained_intron MGP_129S1SvImJ_T0035039.1 MGP_129S1SvImJ_G0019815.1 mouse_genomes_project 12 70889285 70902979 + MGP_129S1SvImJ_P0035039 Tomm20l protein_coding protein_coding MGP_129S1SvImJ_T0035436.1 MGP_129S1SvImJ_G0019947.1 mouse_genomes_project 12 85621085 85623449 + MGP_129S1SvImJ_P0035436 D030025P21Rik protein_coding protein_coding MGP_129S1SvImJ_T0006436.1 MGP_129S1SvImJ_G0005365.1 mouse_genomes_project 12 71174012 71175056 - 1700083H02Rik lincRNA lincRNA MGP_129S1SvImJ_T0034715.1 MGP_129S1SvImJ_G0019696.1 mouse_genomes_project 12 35505197 35859581 + MGP_129S1SvImJ_P0034715 Agmo protein_coding protein_coding MGP_129S1SvImJ_T0034716.1 MGP_129S1SvImJ_G0019696.1 mouse_genomes_project 12 35505306 35508002 + MGP_129S1SvImJ_P0034716 Agmo protein_coding protein_coding MGP_129S1SvImJ_T0034717.1 MGP_129S1SvImJ_G0019696.1 mouse_genomes_project 12 35505335 35673051 + Agmo protein_coding retained_intron MGP_129S1SvImJ_T0034718.1 MGP_129S1SvImJ_G0019696.1 mouse_genomes_project 12 35505416 35691647 + MGP_129S1SvImJ_P0034718 Agmo protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034719.1 MGP_129S1SvImJ_G0019696.1 mouse_genomes_project 12 35505598 35844146 + MGP_129S1SvImJ_P0034719 Agmo protein_coding protein_coding MGP_129S1SvImJ_T0034720.1 MGP_129S1SvImJ_G0019696.1 mouse_genomes_project 12 35505652 35858903 + MGP_129S1SvImJ_P0034720 Agmo protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035640.1 MGP_129S1SvImJ_G0020002.1 mouse_genomes_project 12 96959829 97055025 + MGP_129S1SvImJ_P0035640 Flrt2 protein_coding protein_coding MGP_129S1SvImJ_T0035641.1 MGP_129S1SvImJ_G0020002.1 mouse_genomes_project 12 96962968 97050917 + MGP_129S1SvImJ_P0035641 Flrt2 protein_coding protein_coding MGP_129S1SvImJ_T0003441.1 MGP_129S1SvImJ_G0003158.1 mouse_genomes_project 12 103745119 103747225 - Gm16339 antisense antisense MGP_129S1SvImJ_T0009836.1 MGP_129S1SvImJ_G0007952.1 mouse_genomes_project 12 107766231 107766301 - Gm22120 miRNA miRNA MGP_129S1SvImJ_T0012848.1 MGP_129S1SvImJ_G0010937.1 mouse_genomes_project 12 102718728 102719521 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034366.1 MGP_129S1SvImJ_G0019564.1 mouse_genomes_project 12 995832 1081138 + Adcy3 protein_coding retained_intron MGP_129S1SvImJ_T0034367.1 MGP_129S1SvImJ_G0019564.1 mouse_genomes_project 12 995833 1081138 + MGP_129S1SvImJ_P0034367 Adcy3 protein_coding protein_coding MGP_129S1SvImJ_T0034368.1 MGP_129S1SvImJ_G0019564.1 mouse_genomes_project 12 996126 1081138 + MGP_129S1SvImJ_P0034368 Adcy3 protein_coding protein_coding MGP_129S1SvImJ_T0034369.1 MGP_129S1SvImJ_G0019564.1 mouse_genomes_project 12 996131 1081137 + MGP_129S1SvImJ_P0034369 Adcy3 protein_coding protein_coding MGP_129S1SvImJ_T0034370.1 MGP_129S1SvImJ_G0019564.1 mouse_genomes_project 12 996882 1081137 + MGP_129S1SvImJ_P0034370 Adcy3 protein_coding protein_coding MGP_129S1SvImJ_T0034371.1 MGP_129S1SvImJ_G0019564.1 mouse_genomes_project 12 1025247 1050822 + Adcy3 protein_coding processed_transcript MGP_129S1SvImJ_T0034372.1 MGP_129S1SvImJ_G0019564.1 mouse_genomes_project 12 1062644 1064655 + Adcy3 protein_coding retained_intron MGP_129S1SvImJ_T0034375.1 MGP_129S1SvImJ_G0019564.1 mouse_genomes_project 12 1071012 1074054 + Adcy3 protein_coding retained_intron MGP_129S1SvImJ_T0000282.1 MGP_129S1SvImJ_G0000224.1 mouse_genomes_project 12 117704197 117704631 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0035990.1 MGP_129S1SvImJ_G0020124.1 mouse_genomes_project 12 113235351 113322036 + MGP_129S1SvImJ_P0035990 Tecpr2 protein_coding protein_coding MGP_129S1SvImJ_T0035991.1 MGP_129S1SvImJ_G0020124.1 mouse_genomes_project 12 113235351 113322038 + MGP_129S1SvImJ_P0035991 Tecpr2 protein_coding protein_coding MGP_129S1SvImJ_T0034760.1 MGP_129S1SvImJ_G0019706.1 mouse_genomes_project 12 38863403 39278868 + MGP_129S1SvImJ_P0034760 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0006457.1 MGP_129S1SvImJ_G0005382.1 mouse_genomes_project 12 88355246 88355379 - Gm29362 lincRNA lincRNA MGP_129S1SvImJ_T0009892.1 MGP_129S1SvImJ_G0008008.1 mouse_genomes_project 12 111977416 111977492 + Mir382 miRNA miRNA MGP_129S1SvImJ_T0035234.1 MGP_129S1SvImJ_G0019893.1 mouse_genomes_project 12 81151729 81158225 - MGP_129S1SvImJ_P0035234 Ccdc177 protein_coding protein_coding MGP_129S1SvImJ_T0100575.1 MGP_129S1SvImJ_G0038642.1 mouse_genomes_project 12 64535930 64536016 + Gm25970 snoRNA snoRNA MGP_129S1SvImJ_T0036027.1 MGP_129S1SvImJ_G0020137.1 mouse_genomes_project 12 114070939 114073922 - MGP_129S1SvImJ_P0036027 Ckb protein_coding protein_coding MGP_129S1SvImJ_T0006487.1 MGP_129S1SvImJ_G0005407.1 mouse_genomes_project 12 110672068 110694932 - Gm16596 lincRNA lincRNA MGP_129S1SvImJ_T0034453.1 MGP_129S1SvImJ_G0019595.1 mouse_genomes_project 12 7562729 7567486 + MGP_129S1SvImJ_P0034453 Rdh14 protein_coding protein_coding MGP_129S1SvImJ_T0035462.1 MGP_129S1SvImJ_G0019954.1 mouse_genomes_project 12 85931849 85941485 - MGP_129S1SvImJ_P0035462 Pgf protein_coding protein_coding MGP_129S1SvImJ_T0035078.1 MGP_129S1SvImJ_G0019830.1 mouse_genomes_project 12 72741584 72779926 - MGP_129S1SvImJ_P0035078 4930447C04Rik protein_coding protein_coding MGP_129S1SvImJ_T0035079.1 MGP_129S1SvImJ_G0019830.1 mouse_genomes_project 12 72741584 72780072 - MGP_129S1SvImJ_P0035079 4930447C04Rik protein_coding protein_coding MGP_129S1SvImJ_T0035080.1 MGP_129S1SvImJ_G0019830.1 mouse_genomes_project 12 72753035 72767404 - MGP_129S1SvImJ_P0035080 4930447C04Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035081.1 MGP_129S1SvImJ_G0019830.1 mouse_genomes_project 12 72753089 72767600 - 4930447C04Rik protein_coding retained_intron MGP_129S1SvImJ_T0035082.1 MGP_129S1SvImJ_G0019830.1 mouse_genomes_project 12 72753143 72767398 - 4930447C04Rik protein_coding processed_transcript MGP_129S1SvImJ_T0035083.1 MGP_129S1SvImJ_G0019830.1 mouse_genomes_project 12 72771859 72780095 - MGP_129S1SvImJ_P0035083 4930447C04Rik protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035084.1 MGP_129S1SvImJ_G0019830.1 mouse_genomes_project 12 72773789 72808053 - MGP_129S1SvImJ_P0035084 4930447C04Rik protein_coding protein_coding MGP_129S1SvImJ_T0035085.1 MGP_129S1SvImJ_G0019830.1 mouse_genomes_project 12 72775317 72805306 - MGP_129S1SvImJ_P0035085 4930447C04Rik protein_coding protein_coding MGP_129S1SvImJ_T0035086.1 MGP_129S1SvImJ_G0019830.1 mouse_genomes_project 12 72775321 72807362 - MGP_129S1SvImJ_P0035086 4930447C04Rik protein_coding protein_coding MGP_129S1SvImJ_T0099308.1 MGP_129S1SvImJ_G0037375.1 mouse_genomes_project 12 47751261 47751368 + Gm26454 snRNA snRNA MGP_129S1SvImJ_T0035477.1 MGP_129S1SvImJ_G0019959.1 mouse_genomes_project 12 86069654 86112161 - MGP_129S1SvImJ_P0035477 Nek9 protein_coding protein_coding MGP_129S1SvImJ_T0003430.1 MGP_129S1SvImJ_G0003148.1 mouse_genomes_project 12 82063878 82066293 + Gm16572 antisense antisense MGP_129S1SvImJ_T0035109.1 MGP_129S1SvImJ_G0019840.1 mouse_genomes_project 12 73853000 73878192 + MGP_129S1SvImJ_P0035109 Hif1a protein_coding protein_coding MGP_129S1SvImJ_T0035110.1 MGP_129S1SvImJ_G0019840.1 mouse_genomes_project 12 73853386 73890619 + MGP_129S1SvImJ_P0035110 Hif1a protein_coding protein_coding MGP_129S1SvImJ_T0035111.1 MGP_129S1SvImJ_G0019840.1 mouse_genomes_project 12 73871687 73873619 + Hif1a protein_coding retained_intron MGP_129S1SvImJ_T0035112.1 MGP_129S1SvImJ_G0019840.1 mouse_genomes_project 12 73882779 73884983 + Hif1a protein_coding processed_transcript MGP_129S1SvImJ_T0035201.1 MGP_129S1SvImJ_G0019876.1 mouse_genomes_project 12 79242254 79289484 - MGP_129S1SvImJ_P0035201 Tmem229b protein_coding protein_coding MGP_129S1SvImJ_T0035202.1 MGP_129S1SvImJ_G0019876.1 mouse_genomes_project 12 79259588 79288520 - Tmem229b protein_coding processed_transcript MGP_129S1SvImJ_T0035550.1 MGP_129S1SvImJ_G0019979.1 mouse_genomes_project 12 88043042 88060040 + MGP_129S1SvImJ_P0035550 Gstz1 protein_coding protein_coding MGP_129S1SvImJ_T0035551.1 MGP_129S1SvImJ_G0019979.1 mouse_genomes_project 12 88052977 88059149 + MGP_129S1SvImJ_P0035551 Gstz1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0000260.1 MGP_129S1SvImJ_G0000202.1 mouse_genomes_project 12 116459994 116460439 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0009893.1 MGP_129S1SvImJ_G0008009.1 mouse_genomes_project 12 111977784 111977855 + Mir134 miRNA miRNA MGP_129S1SvImJ_T0000022.1 MGP_129S1SvImJ_G0000016.1 mouse_genomes_project 12 115867323 115869490 + IG_C_pseudogene IG_C_pseudogene MGP_129S1SvImJ_T0000034.1 MGP_129S1SvImJ_G0000028.1 mouse_genomes_project 12 115988708 115988762 - MGP_129S1SvImJ_P0000034 Ighj4 IG_J_gene IG_J_gene MGP_129S1SvImJ_T0035606.1 MGP_129S1SvImJ_G0019996.1 mouse_genomes_project 12 91854120 91868018 - MGP_129S1SvImJ_P0035606 Dio2 protein_coding protein_coding MGP_129S1SvImJ_T0099322.1 MGP_129S1SvImJ_G0037389.1 mouse_genomes_project 12 65024071 65024174 + Gm25599 snRNA snRNA MGP_129S1SvImJ_T0012833.1 MGP_129S1SvImJ_G0010922.1 mouse_genomes_project 12 79448820 79449168 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000117.1 MGP_129S1SvImJ_G0000090.1 mouse_genomes_project 12 118127363 118420338 - MGP_129S1SvImJ_P0000117 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0035074.1 MGP_129S1SvImJ_G0019826.1 mouse_genomes_project 12 72377080 72415017 + MGP_129S1SvImJ_P0035074 Pcnx4 protein_coding protein_coding MGP_129S1SvImJ_T0034687.1 MGP_129S1SvImJ_G0019678.1 mouse_genomes_project 12 32067211 32069359 + MGP_129S1SvImJ_P0034687 Twist1 protein_coding protein_coding MGP_129S1SvImJ_T0000275.1 MGP_129S1SvImJ_G0000217.1 mouse_genomes_project 12 117216125 117216424 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0000273.1 MGP_129S1SvImJ_G0000215.1 mouse_genomes_project 12 117162056 117162354 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0003420.1 MGP_129S1SvImJ_G0003140.1 mouse_genomes_project 12 68937059 68946104 - Gm15561 antisense antisense MGP_129S1SvImJ_T0035835.1 MGP_129S1SvImJ_G0020068.1 mouse_genomes_project 12 105885462 105897724 + MGP_129S1SvImJ_P0035835 Serpina3b protein_coding protein_coding MGP_129S1SvImJ_T0017340.1 MGP_129S1SvImJ_G0015236.1 mouse_genomes_project 12 100696789 100700866 - Gm20682 processed_transcript processed_transcript MGP_129S1SvImJ_T0035759.1 MGP_129S1SvImJ_G0020040.1 mouse_genomes_project 12 104416489 104436253 + MGP_129S1SvImJ_P0035759 Ubr7 protein_coding protein_coding MGP_129S1SvImJ_T0035879.1 MGP_129S1SvImJ_G0020096.1 mouse_genomes_project 12 107684778 107734880 + MGP_129S1SvImJ_P0035879 Papola protein_coding protein_coding MGP_129S1SvImJ_T0035880.1 MGP_129S1SvImJ_G0020096.1 mouse_genomes_project 12 107684785 107709594 + Papola protein_coding processed_transcript MGP_129S1SvImJ_T0035881.1 MGP_129S1SvImJ_G0020096.1 mouse_genomes_project 12 107684790 107737118 + MGP_129S1SvImJ_P0035881 Papola protein_coding protein_coding MGP_129S1SvImJ_T0035882.1 MGP_129S1SvImJ_G0020096.1 mouse_genomes_project 12 107684793 107736847 + MGP_129S1SvImJ_P0035882 Papola protein_coding protein_coding MGP_129S1SvImJ_T0035883.1 MGP_129S1SvImJ_G0020096.1 mouse_genomes_project 12 107684807 107714116 + Papola protein_coding retained_intron MGP_129S1SvImJ_T0035884.1 MGP_129S1SvImJ_G0020096.1 mouse_genomes_project 12 107684812 107736845 + MGP_129S1SvImJ_P0035884 Papola protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035885.1 MGP_129S1SvImJ_G0020096.1 mouse_genomes_project 12 107684814 107709756 + Papola protein_coding processed_transcript MGP_129S1SvImJ_T0035886.1 MGP_129S1SvImJ_G0020096.1 mouse_genomes_project 12 107684817 107738931 + MGP_129S1SvImJ_P0035886 Papola protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035887.1 MGP_129S1SvImJ_G0020096.1 mouse_genomes_project 12 107684819 107706636 + MGP_129S1SvImJ_P0035887 Papola protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035888.1 MGP_129S1SvImJ_G0020096.1 mouse_genomes_project 12 107684831 107709756 + MGP_129S1SvImJ_P0035888 Papola protein_coding protein_coding MGP_129S1SvImJ_T0035889.1 MGP_129S1SvImJ_G0020096.1 mouse_genomes_project 12 107684946 107737260 + MGP_129S1SvImJ_P0035889 Papola protein_coding protein_coding MGP_129S1SvImJ_T0035890.1 MGP_129S1SvImJ_G0020096.1 mouse_genomes_project 12 107699740 107711459 + Papola protein_coding retained_intron MGP_129S1SvImJ_T0035891.1 MGP_129S1SvImJ_G0020096.1 mouse_genomes_project 12 107708660 107720426 + MGP_129S1SvImJ_P0035891 Papola protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035892.1 MGP_129S1SvImJ_G0020096.1 mouse_genomes_project 12 107709370 107709756 + Papola protein_coding retained_intron MGP_129S1SvImJ_T0035893.1 MGP_129S1SvImJ_G0020096.1 mouse_genomes_project 12 107712346 107737097 + MGP_129S1SvImJ_P0035893 Papola protein_coding protein_coding MGP_129S1SvImJ_T0035894.1 MGP_129S1SvImJ_G0020096.1 mouse_genomes_project 12 107712397 107729233 + MGP_129S1SvImJ_P0035894 Papola protein_coding protein_coding MGP_129S1SvImJ_T0035895.1 MGP_129S1SvImJ_G0020096.1 mouse_genomes_project 12 107717926 107718877 + Papola protein_coding retained_intron MGP_129S1SvImJ_T0035896.1 MGP_129S1SvImJ_G0020096.1 mouse_genomes_project 12 107729053 107735486 + MGP_129S1SvImJ_P0035896 Papola protein_coding protein_coding MGP_129S1SvImJ_T0034766.1 MGP_129S1SvImJ_G0019708.1 mouse_genomes_project 12 39931391 39973236 - MGP_129S1SvImJ_P0034766 Lrrn3 protein_coding protein_coding MGP_129S1SvImJ_T0000285.1 MGP_129S1SvImJ_G0000227.1 mouse_genomes_project 12 117746646 117746947 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0000280.1 MGP_129S1SvImJ_G0000222.1 mouse_genomes_project 12 117658875 117659303 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0100552.1 MGP_129S1SvImJ_G0038619.1 mouse_genomes_project 12 18841149 18841283 + Gm25821 snoRNA snoRNA MGP_129S1SvImJ_T0035704.1 MGP_129S1SvImJ_G0020021.1 mouse_genomes_project 12 102363741 102398412 - MGP_129S1SvImJ_P0035704 Gpr68 protein_coding protein_coding MGP_129S1SvImJ_T0035705.1 MGP_129S1SvImJ_G0020021.1 mouse_genomes_project 12 102363744 102398395 - MGP_129S1SvImJ_P0035705 Gpr68 protein_coding protein_coding MGP_129S1SvImJ_T0035706.1 MGP_129S1SvImJ_G0020021.1 mouse_genomes_project 12 102363744 102386637 - MGP_129S1SvImJ_P0035706 Gpr68 protein_coding protein_coding MGP_129S1SvImJ_T0035707.1 MGP_129S1SvImJ_G0020021.1 mouse_genomes_project 12 102366383 102386611 - Gpr68 protein_coding processed_transcript MGP_129S1SvImJ_T0035709.1 MGP_129S1SvImJ_G0020021.1 mouse_genomes_project 12 102374402 102398412 - Gpr68 protein_coding processed_transcript MGP_129S1SvImJ_T0035710.1 MGP_129S1SvImJ_G0020021.1 mouse_genomes_project 12 102374590 102386637 - Gpr68 protein_coding processed_transcript MGP_129S1SvImJ_T0100576.1 MGP_129S1SvImJ_G0038643.1 mouse_genomes_project 12 64892045 64892170 - Gm26015 snoRNA snoRNA MGP_129S1SvImJ_T0034521.1 MGP_129S1SvImJ_G0019622.1 mouse_genomes_project 12 18819648 18839460 - MGP_129S1SvImJ_P0034521 Itgb1bp1 protein_coding protein_coding MGP_129S1SvImJ_T0034522.1 MGP_129S1SvImJ_G0019622.1 mouse_genomes_project 12 18819935 18839320 - MGP_129S1SvImJ_P0034522 Itgb1bp1 protein_coding protein_coding MGP_129S1SvImJ_T0034523.1 MGP_129S1SvImJ_G0019622.1 mouse_genomes_project 12 18820546 18821968 - MGP_129S1SvImJ_P0034523 Itgb1bp1 protein_coding protein_coding MGP_129S1SvImJ_T0034524.1 MGP_129S1SvImJ_G0019622.1 mouse_genomes_project 12 18821132 18839408 - MGP_129S1SvImJ_P0034524 Itgb1bp1 protein_coding protein_coding MGP_129S1SvImJ_T0034525.1 MGP_129S1SvImJ_G0019622.1 mouse_genomes_project 12 18821270 18822615 - Itgb1bp1 protein_coding retained_intron MGP_129S1SvImJ_T0034886.1 MGP_129S1SvImJ_G0019764.1 mouse_genomes_project 12 57458608 57463147 - MGP_129S1SvImJ_P0034886 Clec14a protein_coding protein_coding MGP_129S1SvImJ_T0012856.1 MGP_129S1SvImJ_G0010945.1 mouse_genomes_project 12 108523220 108524710 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009873.1 MGP_129S1SvImJ_G0007989.1 mouse_genomes_project 12 111958965 111959050 + Mir494 miRNA miRNA MGP_129S1SvImJ_T0009902.1 MGP_129S1SvImJ_G0008018.1 mouse_genomes_project 12 111986795 111986874 + Mir409 miRNA miRNA MGP_129S1SvImJ_T0009887.1 MGP_129S1SvImJ_G0008003.1 mouse_genomes_project 12 111970978 111971060 + Mir487b miRNA miRNA MGP_129S1SvImJ_T0035588.1 MGP_129S1SvImJ_G0019992.1 mouse_genomes_project 12 89131226 89143075 - MGP_129S1SvImJ_P0035588 protein_coding protein_coding MGP_129S1SvImJ_T0006412.1 MGP_129S1SvImJ_G0005346.1 mouse_genomes_project 12 10133305 10137783 + 4930519A11Rik lincRNA lincRNA MGP_129S1SvImJ_T0035912.1 MGP_129S1SvImJ_G0020102.1 mouse_genomes_project 12 110292272 110373610 - MGP_129S1SvImJ_P0035912 Ccdc85c protein_coding protein_coding MGP_129S1SvImJ_T0035345.1 MGP_129S1SvImJ_G0019918.1 mouse_genomes_project 12 84447791 84586916 - MGP_129S1SvImJ_P0035345 Numb protein_coding protein_coding MGP_129S1SvImJ_T0035346.1 MGP_129S1SvImJ_G0019918.1 mouse_genomes_project 12 84447793 84537737 - MGP_129S1SvImJ_P0035346 Numb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035347.1 MGP_129S1SvImJ_G0019918.1 mouse_genomes_project 12 84447828 84586826 - MGP_129S1SvImJ_P0035347 Numb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035348.1 MGP_129S1SvImJ_G0019918.1 mouse_genomes_project 12 84449196 84500047 - MGP_129S1SvImJ_P0035348 Numb protein_coding protein_coding MGP_129S1SvImJ_T0035349.1 MGP_129S1SvImJ_G0019918.1 mouse_genomes_project 12 84449196 84500047 - MGP_129S1SvImJ_P0035349 Numb protein_coding protein_coding MGP_129S1SvImJ_T0035350.1 MGP_129S1SvImJ_G0019918.1 mouse_genomes_project 12 84449196 84500047 - MGP_129S1SvImJ_P0035350 Numb protein_coding protein_coding MGP_129S1SvImJ_T0035351.1 MGP_129S1SvImJ_G0019918.1 mouse_genomes_project 12 84457698 84586849 - MGP_129S1SvImJ_P0035351 Numb protein_coding protein_coding MGP_129S1SvImJ_T0035352.1 MGP_129S1SvImJ_G0019918.1 mouse_genomes_project 12 84461865 84586838 - MGP_129S1SvImJ_P0035352 Numb protein_coding protein_coding MGP_129S1SvImJ_T0035353.1 MGP_129S1SvImJ_G0019918.1 mouse_genomes_project 12 84461936 84586865 - MGP_129S1SvImJ_P0035353 Numb protein_coding protein_coding MGP_129S1SvImJ_T0035354.1 MGP_129S1SvImJ_G0019918.1 mouse_genomes_project 12 84465567 84586872 - MGP_129S1SvImJ_P0035354 Numb protein_coding protein_coding MGP_129S1SvImJ_T0035355.1 MGP_129S1SvImJ_G0019918.1 mouse_genomes_project 12 84488130 84537725 - Numb protein_coding retained_intron MGP_129S1SvImJ_T0034702.1 MGP_129S1SvImJ_G0019687.1 mouse_genomes_project 12 34228688 34259842 - MGP_129S1SvImJ_P0034702 Tspan13 protein_coding protein_coding MGP_129S1SvImJ_T0034703.1 MGP_129S1SvImJ_G0019687.1 mouse_genomes_project 12 34235702 34259853 - MGP_129S1SvImJ_P0034703 Tspan13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034704.1 MGP_129S1SvImJ_G0019687.1 mouse_genomes_project 12 34235713 34257287 - MGP_129S1SvImJ_P0034704 Tspan13 protein_coding protein_coding MGP_129S1SvImJ_T0035437.1 MGP_129S1SvImJ_G0019948.1 mouse_genomes_project 12 85666417 85721448 - MGP_129S1SvImJ_P0035437 Arel1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035438.1 MGP_129S1SvImJ_G0019948.1 mouse_genomes_project 12 85666419 85721524 - MGP_129S1SvImJ_P0035438 Arel1 protein_coding protein_coding MGP_129S1SvImJ_T0035439.1 MGP_129S1SvImJ_G0019948.1 mouse_genomes_project 12 85683472 85693192 - MGP_129S1SvImJ_P0035439 Arel1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035440.1 MGP_129S1SvImJ_G0019948.1 mouse_genomes_project 12 85690406 85696737 - MGP_129S1SvImJ_P0035440 Arel1 protein_coding protein_coding MGP_129S1SvImJ_T0035441.1 MGP_129S1SvImJ_G0019948.1 mouse_genomes_project 12 85692006 85695212 - MGP_129S1SvImJ_P0035441 Arel1 protein_coding protein_coding MGP_129S1SvImJ_T0035442.1 MGP_129S1SvImJ_G0019948.1 mouse_genomes_project 12 85692027 85721480 - MGP_129S1SvImJ_P0035442 Arel1 protein_coding protein_coding MGP_129S1SvImJ_T0035443.1 MGP_129S1SvImJ_G0019948.1 mouse_genomes_project 12 85692036 85721462 - MGP_129S1SvImJ_P0035443 Arel1 protein_coding protein_coding MGP_129S1SvImJ_T0035444.1 MGP_129S1SvImJ_G0019948.1 mouse_genomes_project 12 85700895 85715844 - Arel1 protein_coding processed_transcript MGP_129S1SvImJ_T0035926.1 MGP_129S1SvImJ_G0020107.1 mouse_genomes_project 12 110828373 110843847 - MGP_129S1SvImJ_P0035926 Degs2 protein_coding protein_coding MGP_129S1SvImJ_T0035927.1 MGP_129S1SvImJ_G0020107.1 mouse_genomes_project 12 110831803 110843847 - MGP_129S1SvImJ_P0035927 Degs2 protein_coding protein_coding MGP_129S1SvImJ_T0034859.1 MGP_129S1SvImJ_G0019755.1 mouse_genomes_project 12 55650728 55653865 - MGP_129S1SvImJ_P0034859 Nkx2-1 protein_coding protein_coding MGP_129S1SvImJ_T0034860.1 MGP_129S1SvImJ_G0019755.1 mouse_genomes_project 12 55650728 55655561 - MGP_129S1SvImJ_P0034860 Nkx2-1 protein_coding protein_coding MGP_129S1SvImJ_T0006419.1 MGP_129S1SvImJ_G0005350.1 mouse_genomes_project 12 26289776 26293950 - 1700022F17Rik lincRNA lincRNA MGP_129S1SvImJ_T0034802.1 MGP_129S1SvImJ_G0019726.1 mouse_genomes_project 12 50497643 50550947 + MGP_129S1SvImJ_P0034802 Ap4s1 protein_coding protein_coding MGP_129S1SvImJ_T0006423.1 MGP_129S1SvImJ_G0005354.1 mouse_genomes_project 12 30855454 30860469 + Gdap10 lincRNA lincRNA MGP_129S1SvImJ_T0000070.1 MGP_129S1SvImJ_G0000056.1 mouse_genomes_project 12 116636459 116637039 - MGP_129S1SvImJ_P0000070 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0034977.1 MGP_129S1SvImJ_G0019796.1 mouse_genomes_project 12 69062004 69065835 + MGP_129S1SvImJ_P0034977 Arf6 protein_coding protein_coding MGP_129S1SvImJ_T0035167.1 MGP_129S1SvImJ_G0019862.1 mouse_genomes_project 12 76713435 76844474 - MGP_129S1SvImJ_P0035167 Sptb protein_coding protein_coding MGP_129S1SvImJ_T0035168.1 MGP_129S1SvImJ_G0019862.1 mouse_genomes_project 12 76716181 76717037 - Sptb protein_coding retained_intron MGP_129S1SvImJ_T0035169.1 MGP_129S1SvImJ_G0019862.1 mouse_genomes_project 12 76729071 76843950 - MGP_129S1SvImJ_P0035169 Sptb protein_coding protein_coding MGP_129S1SvImJ_T0034536.1 MGP_129S1SvImJ_G0019626.1 mouse_genomes_project 12 18948616 18977243 - MGP_129S1SvImJ_P0034536 Ywhaq protein_coding protein_coding MGP_129S1SvImJ_T0034537.1 MGP_129S1SvImJ_G0019626.1 mouse_genomes_project 12 18949488 18976939 - MGP_129S1SvImJ_P0034537 Ywhaq protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034538.1 MGP_129S1SvImJ_G0019626.1 mouse_genomes_project 12 18953728 18976480 - Ywhaq protein_coding processed_transcript MGP_129S1SvImJ_T0034539.1 MGP_129S1SvImJ_G0019626.1 mouse_genomes_project 12 18954436 18956891 - Ywhaq protein_coding retained_intron MGP_129S1SvImJ_T0034869.1 MGP_129S1SvImJ_G0019759.1 mouse_genomes_project 12 56405041 56414496 + MGP_129S1SvImJ_P0034869 Prps1l3 protein_coding protein_coding MGP_129S1SvImJ_T0034967.1 MGP_129S1SvImJ_G0019792.1 mouse_genomes_project 12 68907615 68909069 + Klhdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0034968.1 MGP_129S1SvImJ_G0019792.1 mouse_genomes_project 12 68908260 68959189 + MGP_129S1SvImJ_P0034968 Klhdc1 protein_coding protein_coding MGP_129S1SvImJ_T0034969.1 MGP_129S1SvImJ_G0019792.1 mouse_genomes_project 12 68908342 68909071 + Klhdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0034970.1 MGP_129S1SvImJ_G0019792.1 mouse_genomes_project 12 68908346 68957876 + MGP_129S1SvImJ_P0034970 Klhdc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0000079.1 MGP_129S1SvImJ_G0000062.1 mouse_genomes_project 12 116873235 116873670 - MGP_129S1SvImJ_P0000079 Ighv3-4 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0102182.1 MGP_129S1SvImJ_G0040016.1 mouse_genomes_project 12 115926893 115928099 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0000881.1 MGP_129S1SvImJ_G0000814.1 mouse_genomes_project 12 45848716 45849182 + TEC TEC MGP_129S1SvImJ_T0009913.1 MGP_129S1SvImJ_G0008029.1 mouse_genomes_project 12 115204966 115205036 + Mir6940 miRNA miRNA MGP_129S1SvImJ_T0035855.1 MGP_129S1SvImJ_G0020081.1 mouse_genomes_project 12 106689890 106696116 + MGP_129S1SvImJ_P0035855 4930408O17Rik protein_coding protein_coding MGP_129S1SvImJ_T0034387.1 MGP_129S1SvImJ_G0019572.1 mouse_genomes_project 12 1652461 1679750 - MGP_129S1SvImJ_P0034387 Fam228b protein_coding protein_coding MGP_129S1SvImJ_T0035094.1 MGP_129S1SvImJ_G0019834.1 mouse_genomes_project 12 72998335 73167569 + MGP_129S1SvImJ_P0035094 Mnat1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035095.1 MGP_129S1SvImJ_G0019834.1 mouse_genomes_project 12 72998335 73168706 + MGP_129S1SvImJ_P0035095 Mnat1 protein_coding protein_coding MGP_129S1SvImJ_T0035096.1 MGP_129S1SvImJ_G0019834.1 mouse_genomes_project 12 72998335 73127457 + MGP_129S1SvImJ_P0035096 Mnat1 protein_coding protein_coding MGP_129S1SvImJ_T0035097.1 MGP_129S1SvImJ_G0019834.1 mouse_genomes_project 12 72998455 73167252 + MGP_129S1SvImJ_P0035097 Mnat1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0017344.1 MGP_129S1SvImJ_G0015239.1 mouse_genomes_project 12 104319748 104383584 - Gm28373 processed_transcript processed_transcript MGP_129S1SvImJ_T0101851.1 MGP_129S1SvImJ_G0039795.1 mouse_genomes_project 12 106011051 106017498 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101852.1 MGP_129S1SvImJ_G0039795.1 mouse_genomes_project 12 106013298 106018204 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0009909.1 MGP_129S1SvImJ_G0008025.1 mouse_genomes_project 12 114542702 114542787 + Mir3073a miRNA miRNA MGP_129S1SvImJ_T0034854.1 MGP_129S1SvImJ_G0019752.1 mouse_genomes_project 12 54659142 54895489 - MGP_129S1SvImJ_P0034854 Ralgapa1 protein_coding protein_coding MGP_129S1SvImJ_T0034855.1 MGP_129S1SvImJ_G0019752.1 mouse_genomes_project 12 54659142 54895489 - MGP_129S1SvImJ_P0034855 Ralgapa1 protein_coding protein_coding MGP_129S1SvImJ_T0034856.1 MGP_129S1SvImJ_G0019752.1 mouse_genomes_project 12 54667929 54895089 - MGP_129S1SvImJ_P0034856 Ralgapa1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034921.1 MGP_129S1SvImJ_G0019771.1 mouse_genomes_project 12 58407562 58428683 - MGP_129S1SvImJ_P0034921 Fbxo33 protein_coding protein_coding MGP_129S1SvImJ_T0034922.1 MGP_129S1SvImJ_G0019771.1 mouse_genomes_project 12 58407564 58411345 - MGP_129S1SvImJ_P0034922 Fbxo33 protein_coding protein_coding MGP_129S1SvImJ_T0034923.1 MGP_129S1SvImJ_G0019771.1 mouse_genomes_project 12 58407565 58413535 - Fbxo33 protein_coding retained_intron MGP_129S1SvImJ_T0034924.1 MGP_129S1SvImJ_G0019771.1 mouse_genomes_project 12 58411460 58427759 - MGP_129S1SvImJ_P0034924 Fbxo33 protein_coding protein_coding MGP_129S1SvImJ_T0100577.1 MGP_129S1SvImJ_G0038644.1 mouse_genomes_project 12 65055369 65055501 - Gm23948 snoRNA snoRNA MGP_129S1SvImJ_T0100589.1 MGP_129S1SvImJ_G0038656.1 mouse_genomes_project 12 103879400 103879616 - Gm25203 snoRNA snoRNA MGP_129S1SvImJ_T0035098.1 MGP_129S1SvImJ_G0019835.1 mouse_genomes_project 12 73175876 73182137 - MGP_129S1SvImJ_P0035098 Trmt5 protein_coding protein_coding MGP_129S1SvImJ_T0035099.1 MGP_129S1SvImJ_G0019835.1 mouse_genomes_project 12 73176016 73182175 - MGP_129S1SvImJ_P0035099 Trmt5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0000105.1 MGP_129S1SvImJ_G0000080.1 mouse_genomes_project 12 117398734 117399028 - MGP_129S1SvImJ_P0000105 Ighv1-16 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0035049.1 MGP_129S1SvImJ_G0019820.1 mouse_genomes_project 12 71881377 71882751 - MGP_129S1SvImJ_P0035049 Gpr135 protein_coding protein_coding MGP_129S1SvImJ_T0035365.1 MGP_129S1SvImJ_G0019926.1 mouse_genomes_project 12 84751248 84757944 + MGP_129S1SvImJ_P0035365 Acot5 protein_coding protein_coding MGP_129S1SvImJ_T0035366.1 MGP_129S1SvImJ_G0019926.1 mouse_genomes_project 12 84751248 84757943 + MGP_129S1SvImJ_P0035366 Acot5 protein_coding protein_coding MGP_129S1SvImJ_T0012858.1 MGP_129S1SvImJ_G0010947.1 mouse_genomes_project 12 109225616 109226607 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099300.1 MGP_129S1SvImJ_G0037367.1 mouse_genomes_project 12 6987481 6987585 - Gm22845 snRNA snRNA MGP_129S1SvImJ_T0035125.1 MGP_129S1SvImJ_G0019848.1 mouse_genomes_project 12 75461655 75624046 - MGP_129S1SvImJ_P0035125 Ppp2r5e protein_coding protein_coding MGP_129S1SvImJ_T0000094.1 MGP_129S1SvImJ_G0000073.1 mouse_genomes_project 12 117126132 117128635 - MGP_129S1SvImJ_P0000094 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000024.1 MGP_129S1SvImJ_G0000018.1 mouse_genomes_project 12 116009781 116009810 - MGP_129S1SvImJ_P0000024 Ighd5-7 IG_D_gene IG_D_gene MGP_129S1SvImJ_T0099327.1 MGP_129S1SvImJ_G0037394.1 mouse_genomes_project 12 70426081 70426182 + Gm24474 snRNA snRNA MGP_129S1SvImJ_T0034851.1 MGP_129S1SvImJ_G0019749.1 mouse_genomes_project 12 54537544 54540788 - MGP_129S1SvImJ_P0034851 Nfkbia protein_coding protein_coding MGP_129S1SvImJ_T0034391.1 MGP_129S1SvImJ_G0019575.1 mouse_genomes_project 12 1745486 1753907 - MGP_129S1SvImJ_P0034391 Fkbp1b protein_coding protein_coding MGP_129S1SvImJ_T0034380.1 MGP_129S1SvImJ_G0019566.1 mouse_genomes_project 12 1104433 1111552 + MGP_129S1SvImJ_P0034380 Ptrhd1 protein_coding protein_coding MGP_129S1SvImJ_T0000883.1 MGP_129S1SvImJ_G0000816.1 mouse_genomes_project 12 56716594 56722054 + TEC TEC MGP_129S1SvImJ_T0100597.1 MGP_129S1SvImJ_G0038664.1 mouse_genomes_project 12 111877794 111877865 + Gm23600 snoRNA snoRNA MGP_129S1SvImJ_T0100579.1 MGP_129S1SvImJ_G0038646.1 mouse_genomes_project 12 66096047 66096166 - Gm23826 snoRNA snoRNA MGP_129S1SvImJ_T0036124.1 MGP_129S1SvImJ_G0020172.1 mouse_genomes_project 12 115636622 115641557 + MGP_129S1SvImJ_P0036124 Crip2 protein_coding protein_coding MGP_129S1SvImJ_T0036125.1 MGP_129S1SvImJ_G0020172.1 mouse_genomes_project 12 115636622 115641154 + MGP_129S1SvImJ_P0036125 Crip2 protein_coding protein_coding MGP_129S1SvImJ_T0036126.1 MGP_129S1SvImJ_G0020172.1 mouse_genomes_project 12 115639385 115641020 + Crip2 protein_coding retained_intron MGP_129S1SvImJ_T0036127.1 MGP_129S1SvImJ_G0020172.1 mouse_genomes_project 12 115639520 115640282 + Crip2 protein_coding retained_intron MGP_129S1SvImJ_T0036128.1 MGP_129S1SvImJ_G0020172.1 mouse_genomes_project 12 115640136 115640755 + Crip2 protein_coding retained_intron MGP_129S1SvImJ_T0009914.1 MGP_129S1SvImJ_G0008030.1 mouse_genomes_project 12 115403283 115403342 - Mir6941 miRNA miRNA MGP_129S1SvImJ_T0006422.1 MGP_129S1SvImJ_G0005353.1 mouse_genomes_project 12 29456659 29457337 - Gm29541 lincRNA lincRNA MGP_129S1SvImJ_T0099336.1 MGP_129S1SvImJ_G0037403.1 mouse_genomes_project 12 94904583 94904744 + Gm23249 snRNA snRNA MGP_129S1SvImJ_T0035762.1 MGP_129S1SvImJ_G0020043.1 mouse_genomes_project 12 104605910 104860252 + MGP_129S1SvImJ_P0035762 Unc79 protein_coding protein_coding MGP_129S1SvImJ_T0035763.1 MGP_129S1SvImJ_G0020043.1 mouse_genomes_project 12 104608000 104859864 + MGP_129S1SvImJ_P0035763 Unc79 protein_coding protein_coding MGP_129S1SvImJ_T0035764.1 MGP_129S1SvImJ_G0020043.1 mouse_genomes_project 12 104653220 104859864 + MGP_129S1SvImJ_P0035764 Unc79 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035765.1 MGP_129S1SvImJ_G0020043.1 mouse_genomes_project 12 104665149 104669540 + Unc79 protein_coding retained_intron MGP_129S1SvImJ_T0035766.1 MGP_129S1SvImJ_G0020043.1 mouse_genomes_project 12 104665920 104733814 + MGP_129S1SvImJ_P0035766 Unc79 protein_coding protein_coding MGP_129S1SvImJ_T0035767.1 MGP_129S1SvImJ_G0020043.1 mouse_genomes_project 12 104665971 104860249 + MGP_129S1SvImJ_P0035767 Unc79 protein_coding protein_coding MGP_129S1SvImJ_T0035768.1 MGP_129S1SvImJ_G0020043.1 mouse_genomes_project 12 104666028 104860316 + MGP_129S1SvImJ_P0035768 Unc79 protein_coding protein_coding MGP_129S1SvImJ_T0035769.1 MGP_129S1SvImJ_G0020043.1 mouse_genomes_project 12 104733464 104745090 + Unc79 protein_coding retained_intron MGP_129S1SvImJ_T0035770.1 MGP_129S1SvImJ_G0020043.1 mouse_genomes_project 12 104769369 104785531 + MGP_129S1SvImJ_P0035770 Unc79 protein_coding protein_coding MGP_129S1SvImJ_T0035771.1 MGP_129S1SvImJ_G0020043.1 mouse_genomes_project 12 104808742 104821640 + MGP_129S1SvImJ_P0035771 Unc79 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0000287.1 MGP_129S1SvImJ_G0000229.1 mouse_genomes_project 12 118403565 118403859 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0034744.1 MGP_129S1SvImJ_G0019702.1 mouse_genomes_project 12 38614140 38635583 - MGP_129S1SvImJ_P0034744 Ifrd1 protein_coding protein_coding MGP_129S1SvImJ_T0034745.1 MGP_129S1SvImJ_G0019702.1 mouse_genomes_project 12 38615704 38619636 - MGP_129S1SvImJ_P0034745 Ifrd1 protein_coding protein_coding MGP_129S1SvImJ_T0034746.1 MGP_129S1SvImJ_G0019702.1 mouse_genomes_project 12 38615893 38617216 - Ifrd1 protein_coding retained_intron MGP_129S1SvImJ_T0034747.1 MGP_129S1SvImJ_G0019702.1 mouse_genomes_project 12 38616492 38635356 - MGP_129S1SvImJ_P0034747 Ifrd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034748.1 MGP_129S1SvImJ_G0019702.1 mouse_genomes_project 12 38626553 38661741 - MGP_129S1SvImJ_P0034748 Ifrd1 protein_coding protein_coding MGP_129S1SvImJ_T0034749.1 MGP_129S1SvImJ_G0019702.1 mouse_genomes_project 12 38626610 38630087 - MGP_129S1SvImJ_P0034749 Ifrd1 protein_coding protein_coding MGP_129S1SvImJ_T0034750.1 MGP_129S1SvImJ_G0019702.1 mouse_genomes_project 12 38626667 38662148 - MGP_129S1SvImJ_P0034750 Ifrd1 protein_coding protein_coding MGP_129S1SvImJ_T0034751.1 MGP_129S1SvImJ_G0019702.1 mouse_genomes_project 12 38627935 38635579 - Ifrd1 protein_coding retained_intron MGP_129S1SvImJ_T0034752.1 MGP_129S1SvImJ_G0019702.1 mouse_genomes_project 12 38628762 38662166 - MGP_129S1SvImJ_P0034752 Ifrd1 protein_coding protein_coding MGP_129S1SvImJ_T0034753.1 MGP_129S1SvImJ_G0019702.1 mouse_genomes_project 12 38629731 38635543 - MGP_129S1SvImJ_P0034753 Ifrd1 protein_coding protein_coding MGP_129S1SvImJ_T0100568.1 MGP_129S1SvImJ_G0038635.1 mouse_genomes_project 12 49858057 49858174 + Gm22088 snoRNA snoRNA MGP_129S1SvImJ_T0035422.1 MGP_129S1SvImJ_G0019941.1 mouse_genomes_project 12 85325620 85340560 - MGP_129S1SvImJ_P0035422 Abcd4 protein_coding protein_coding MGP_129S1SvImJ_T0035479.1 MGP_129S1SvImJ_G0019961.1 mouse_genomes_project 12 86250394 86253782 + MGP_129S1SvImJ_P0035479 Fos protein_coding protein_coding MGP_129S1SvImJ_T0035480.1 MGP_129S1SvImJ_G0019961.1 mouse_genomes_project 12 86251195 86252694 + Fos protein_coding processed_transcript MGP_129S1SvImJ_T0035481.1 MGP_129S1SvImJ_G0019961.1 mouse_genomes_project 12 86251195 86252516 + Fos protein_coding processed_transcript MGP_129S1SvImJ_T0035482.1 MGP_129S1SvImJ_G0019961.1 mouse_genomes_project 12 86251415 86252572 + Fos protein_coding processed_transcript MGP_129S1SvImJ_T0034312.1 MGP_129S1SvImJ_G0019557.1 mouse_genomes_project 12 222428 306768 + MGP_129S1SvImJ_P0034312 Asxl2 protein_coding protein_coding MGP_129S1SvImJ_T0034313.1 MGP_129S1SvImJ_G0019557.1 mouse_genomes_project 12 222428 306773 + MGP_129S1SvImJ_P0034313 Asxl2 protein_coding protein_coding MGP_129S1SvImJ_T0034314.1 MGP_129S1SvImJ_G0019557.1 mouse_genomes_project 12 222455 296543 + MGP_129S1SvImJ_P0034314 Asxl2 protein_coding protein_coding MGP_129S1SvImJ_T0034315.1 MGP_129S1SvImJ_G0019557.1 mouse_genomes_project 12 222472 302427 + MGP_129S1SvImJ_P0034315 Asxl2 protein_coding protein_coding MGP_129S1SvImJ_T0034316.1 MGP_129S1SvImJ_G0019557.1 mouse_genomes_project 12 222483 251552 + Asxl2 protein_coding retained_intron MGP_129S1SvImJ_T0034317.1 MGP_129S1SvImJ_G0019557.1 mouse_genomes_project 12 239028 296668 + MGP_129S1SvImJ_P0034317 Asxl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034318.1 MGP_129S1SvImJ_G0019557.1 mouse_genomes_project 12 294019 304669 + Asxl2 protein_coding processed_transcript MGP_129S1SvImJ_T0036097.1 MGP_129S1SvImJ_G0020159.1 mouse_genomes_project 12 115233938 115242495 + MGP_129S1SvImJ_P0036097 Pld4 protein_coding protein_coding MGP_129S1SvImJ_T0000267.1 MGP_129S1SvImJ_G0000209.1 mouse_genomes_project 12 116762639 116762915 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0099297.1 MGP_129S1SvImJ_G0037364.1 mouse_genomes_project 12 1655999 1656104 + Gm23676 snRNA snRNA MGP_129S1SvImJ_T0035585.1 MGP_129S1SvImJ_G0019989.1 mouse_genomes_project 12 88367477 88391447 - MGP_129S1SvImJ_P0035585 Snw1 protein_coding protein_coding MGP_129S1SvImJ_T0099343.1 MGP_129S1SvImJ_G0037410.1 mouse_genomes_project 12 119342836 119342940 - Gm25112 snRNA snRNA MGP_129S1SvImJ_T0098823.1 MGP_129S1SvImJ_G0036904.1 mouse_genomes_project 12 85670797 85671768 - Gm17193 sense_intronic sense_intronic MGP_129S1SvImJ_T0034407.1 MGP_129S1SvImJ_G0019580.1 mouse_genomes_project 12 2001426 2222690 - MGP_129S1SvImJ_P0034407 Klhl29 protein_coding protein_coding MGP_129S1SvImJ_T0006453.1 MGP_129S1SvImJ_G0005378.1 mouse_genomes_project 12 86992543 87019181 + Gm805 lincRNA lincRNA MGP_129S1SvImJ_T0000262.1 MGP_129S1SvImJ_G0000204.1 mouse_genomes_project 12 116468672 116468969 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0000006.1 MGP_129S1SvImJ_G0000004.1 mouse_genomes_project 12 115803035 115805109 - MGP_129S1SvImJ_P0000006 Ighe IG_C_gene IG_C_gene MGP_129S1SvImJ_T0012867.1 MGP_129S1SvImJ_G0010956.1 mouse_genomes_project 12 116889208 116889859 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034544.1 MGP_129S1SvImJ_G0019630.1 mouse_genomes_project 12 22332523 22343996 + MGP_129S1SvImJ_P0034544 Klf11 protein_coding protein_coding MGP_129S1SvImJ_T0034545.1 MGP_129S1SvImJ_G0019630.1 mouse_genomes_project 12 22333048 22336275 + MGP_129S1SvImJ_P0034545 Klf11 protein_coding protein_coding MGP_129S1SvImJ_T0034546.1 MGP_129S1SvImJ_G0019630.1 mouse_genomes_project 12 22333048 22334946 + MGP_129S1SvImJ_P0034546 Klf11 protein_coding protein_coding MGP_129S1SvImJ_T0034547.1 MGP_129S1SvImJ_G0019630.1 mouse_genomes_project 12 22333305 22336270 + MGP_129S1SvImJ_P0034547 Klf11 protein_coding protein_coding MGP_129S1SvImJ_T0000004.1 MGP_129S1SvImJ_G0000003.1 mouse_genomes_project 12 115782839 115788231 - MGP_129S1SvImJ_P0000004 Igha IG_C_gene IG_C_gene MGP_129S1SvImJ_T0000005.1 MGP_129S1SvImJ_G0000003.1 mouse_genomes_project 12 115786696 115788231 - MGP_129S1SvImJ_P0000005 Igha IG_C_gene IG_C_gene MGP_129S1SvImJ_T0100569.1 MGP_129S1SvImJ_G0038636.1 mouse_genomes_project 12 55355278 55355408 - Gm25917 snoRNA snoRNA MGP_129S1SvImJ_T0034966.1 MGP_129S1SvImJ_G0019791.1 mouse_genomes_project 12 68865871 68892823 - MGP_129S1SvImJ_P0034966 Pole2 protein_coding protein_coding MGP_129S1SvImJ_T0000288.1 MGP_129S1SvImJ_G0000230.1 mouse_genomes_project 12 118513428 118513858 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0036107.1 MGP_129S1SvImJ_G0020166.1 mouse_genomes_project 12 115442757 115484097 - MGP_129S1SvImJ_P0036107 Brf1 protein_coding protein_coding MGP_129S1SvImJ_T0035875.1 MGP_129S1SvImJ_G0020093.1 mouse_genomes_project 12 107494625 107565556 - MGP_129S1SvImJ_P0035875 Atg2b protein_coding protein_coding MGP_129S1SvImJ_T0035876.1 MGP_129S1SvImJ_G0020093.1 mouse_genomes_project 12 107494630 107565145 - MGP_129S1SvImJ_P0035876 Atg2b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034319.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 387953 614126 + MGP_129S1SvImJ_P0034319 Dtnb protein_coding protein_coding MGP_129S1SvImJ_T0034320.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 387963 613729 + MGP_129S1SvImJ_P0034320 Dtnb protein_coding protein_coding MGP_129S1SvImJ_T0034321.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 387989 613690 + MGP_129S1SvImJ_P0034321 Dtnb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034322.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 388005 613729 + MGP_129S1SvImJ_P0034322 Dtnb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034323.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 388006 465836 + MGP_129S1SvImJ_P0034323 Dtnb protein_coding protein_coding MGP_129S1SvImJ_T0034324.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 388007 545996 + Dtnb protein_coding retained_intron MGP_129S1SvImJ_T0034325.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 388025 613726 + MGP_129S1SvImJ_P0034325 Dtnb protein_coding protein_coding MGP_129S1SvImJ_T0034326.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 388035 613473 + MGP_129S1SvImJ_P0034326 Dtnb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034327.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 388037 613724 + MGP_129S1SvImJ_P0034327 Dtnb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034328.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 388038 479102 + Dtnb protein_coding processed_transcript MGP_129S1SvImJ_T0034329.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 388042 613726 + MGP_129S1SvImJ_P0034329 Dtnb protein_coding protein_coding MGP_129S1SvImJ_T0034330.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 388047 613726 + MGP_129S1SvImJ_P0034330 Dtnb protein_coding protein_coding MGP_129S1SvImJ_T0034331.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 388095 613836 + MGP_129S1SvImJ_P0034331 Dtnb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034332.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 388108 413099 + MGP_129S1SvImJ_P0034332 Dtnb protein_coding protein_coding MGP_129S1SvImJ_T0034333.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 388192 581830 + MGP_129S1SvImJ_P0034333 Dtnb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034334.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 388556 613722 + MGP_129S1SvImJ_P0034334 Dtnb protein_coding protein_coding MGP_129S1SvImJ_T0034335.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 405515 613726 + MGP_129S1SvImJ_P0034335 Dtnb protein_coding protein_coding MGP_129S1SvImJ_T0034336.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 435835 616377 + MGP_129S1SvImJ_P0034336 Dtnb protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034337.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 451404 613726 + MGP_129S1SvImJ_P0034337 Dtnb protein_coding protein_coding MGP_129S1SvImJ_T0034338.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 506582 543875 + Dtnb protein_coding retained_intron MGP_129S1SvImJ_T0034339.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 544446 579397 + Dtnb protein_coding processed_transcript MGP_129S1SvImJ_T0034340.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 579211 613473 + Dtnb protein_coding retained_intron MGP_129S1SvImJ_T0034341.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 579465 613729 + MGP_129S1SvImJ_P0034341 Dtnb protein_coding protein_coding MGP_129S1SvImJ_T0034342.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 606655 613729 + Dtnb protein_coding processed_transcript MGP_129S1SvImJ_T0034343.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 606865 613728 + Dtnb protein_coding retained_intron MGP_129S1SvImJ_T0034344.1 MGP_129S1SvImJ_G0019558.1 mouse_genomes_project 12 611888 613729 + Dtnb protein_coding retained_intron MGP_129S1SvImJ_T0009866.1 MGP_129S1SvImJ_G0007982.1 mouse_genomes_project 12 111954292 111954341 - Mir299b miRNA miRNA MGP_129S1SvImJ_T0034933.1 MGP_129S1SvImJ_G0019776.1 mouse_genomes_project 12 64417616 64441693 - MGP_129S1SvImJ_P0034933 Klhl28 protein_coding protein_coding MGP_129S1SvImJ_T0000071.1 MGP_129S1SvImJ_G0000057.1 mouse_genomes_project 12 116654384 116654862 - MGP_129S1SvImJ_P0000071 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0034686.1 MGP_129S1SvImJ_G0019677.1 mouse_genomes_project 12 32034422 32035308 + MGP_129S1SvImJ_P0034686 Ferd3l protein_coding protein_coding MGP_129S1SvImJ_T0006427.1 MGP_129S1SvImJ_G0005357.1 mouse_genomes_project 12 35368765 35378134 - Gm29007 lincRNA lincRNA MGP_129S1SvImJ_T0034769.1 MGP_129S1SvImJ_G0019711.1 mouse_genomes_project 12 42833607 42875871 + MGP_129S1SvImJ_P0034769 Pnpla8 protein_coding protein_coding MGP_129S1SvImJ_T0034770.1 MGP_129S1SvImJ_G0019711.1 mouse_genomes_project 12 42839510 42847162 + MGP_129S1SvImJ_P0034770 Pnpla8 protein_coding protein_coding MGP_129S1SvImJ_T0034771.1 MGP_129S1SvImJ_G0019711.1 mouse_genomes_project 12 42846844 42876615 + MGP_129S1SvImJ_P0034771 Pnpla8 protein_coding protein_coding MGP_129S1SvImJ_T0034772.1 MGP_129S1SvImJ_G0019711.1 mouse_genomes_project 12 42863548 42876116 + MGP_129S1SvImJ_P0034772 Pnpla8 protein_coding protein_coding MGP_129S1SvImJ_T0098479.1 MGP_129S1SvImJ_G0036564.1 mouse_genomes_project 12 105866761 105866869 + Gm23289 rRNA rRNA MGP_129S1SvImJ_T0000098.1 MGP_129S1SvImJ_G0000076.1 mouse_genomes_project 12 117286171 117286605 - MGP_129S1SvImJ_P0000098 Ighv1-9 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000099.1 MGP_129S1SvImJ_G0000076.1 mouse_genomes_project 12 117286171 117286605 - MGP_129S1SvImJ_P0000099 Ighv1-9 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0034978.1 MGP_129S1SvImJ_G0019797.1 mouse_genomes_project 12 69278322 69283723 - MGP_129S1SvImJ_P0034978 Vcpkmt protein_coding protein_coding MGP_129S1SvImJ_T0034979.1 MGP_129S1SvImJ_G0019797.1 mouse_genomes_project 12 69278620 69283708 - MGP_129S1SvImJ_P0034979 Vcpkmt protein_coding unknown_likely_coding MGP_129S1SvImJ_T0099332.1 MGP_129S1SvImJ_G0037399.1 mouse_genomes_project 12 79394189 79394294 - Gm27297 snRNA snRNA MGP_129S1SvImJ_T0035915.1 MGP_129S1SvImJ_G0020105.1 mouse_genomes_project 12 110487831 110642352 + Eml1 protein_coding retained_intron MGP_129S1SvImJ_T0035916.1 MGP_129S1SvImJ_G0020105.1 mouse_genomes_project 12 110544243 110675233 + MGP_129S1SvImJ_P0035916 Eml1 protein_coding protein_coding MGP_129S1SvImJ_T0035917.1 MGP_129S1SvImJ_G0020105.1 mouse_genomes_project 12 110544505 110673201 + MGP_129S1SvImJ_P0035917 Eml1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035918.1 MGP_129S1SvImJ_G0020105.1 mouse_genomes_project 12 110544622 110675242 + MGP_129S1SvImJ_P0035918 Eml1 protein_coding protein_coding MGP_129S1SvImJ_T0035919.1 MGP_129S1SvImJ_G0020105.1 mouse_genomes_project 12 110601292 110675233 + Eml1 protein_coding processed_transcript MGP_129S1SvImJ_T0035920.1 MGP_129S1SvImJ_G0020105.1 mouse_genomes_project 12 110669736 110673096 + Eml1 protein_coding processed_transcript MGP_129S1SvImJ_T0035921.1 MGP_129S1SvImJ_G0020105.1 mouse_genomes_project 12 110669794 110675286 + Eml1 protein_coding processed_transcript MGP_129S1SvImJ_T0017325.1 MGP_129S1SvImJ_G0015228.1 mouse_genomes_project 12 31169314 31212416 - F730043M19Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017326.1 MGP_129S1SvImJ_G0015228.1 mouse_genomes_project 12 31184686 31211739 - F730043M19Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017327.1 MGP_129S1SvImJ_G0015228.1 mouse_genomes_project 12 31191687 31212416 - F730043M19Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017328.1 MGP_129S1SvImJ_G0015228.1 mouse_genomes_project 12 31194594 31212427 - F730043M19Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017329.1 MGP_129S1SvImJ_G0015228.1 mouse_genomes_project 12 31195328 31199587 - F730043M19Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017330.1 MGP_129S1SvImJ_G0015228.1 mouse_genomes_project 12 31211974 31212426 - F730043M19Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0035553.1 MGP_129S1SvImJ_G0019981.1 mouse_genomes_project 12 88096246 88107036 + Samd15 protein_coding retained_intron MGP_129S1SvImJ_T0035554.1 MGP_129S1SvImJ_G0019981.1 mouse_genomes_project 12 88096290 88106714 + Samd15 protein_coding processed_transcript MGP_129S1SvImJ_T0035555.1 MGP_129S1SvImJ_G0019981.1 mouse_genomes_project 12 88098250 88111399 + MGP_129S1SvImJ_P0035555 Samd15 protein_coding protein_coding MGP_129S1SvImJ_T0035556.1 MGP_129S1SvImJ_G0019981.1 mouse_genomes_project 12 88098457 88099651 + MGP_129S1SvImJ_P0035556 Samd15 protein_coding protein_coding MGP_129S1SvImJ_T0035654.1 MGP_129S1SvImJ_G0020008.1 mouse_genomes_project 12 100149750 100191817 + MGP_129S1SvImJ_P0035654 Zc3h14 protein_coding protein_coding MGP_129S1SvImJ_T0035655.1 MGP_129S1SvImJ_G0020008.1 mouse_genomes_project 12 100149750 100191817 + MGP_129S1SvImJ_P0035655 Zc3h14 protein_coding protein_coding MGP_129S1SvImJ_T0035656.1 MGP_129S1SvImJ_G0020008.1 mouse_genomes_project 12 100149750 100191817 + MGP_129S1SvImJ_P0035656 Zc3h14 protein_coding protein_coding MGP_129S1SvImJ_T0035657.1 MGP_129S1SvImJ_G0020008.1 mouse_genomes_project 12 100175055 100191817 + MGP_129S1SvImJ_P0035657 Zc3h14 protein_coding protein_coding MGP_129S1SvImJ_T0003425.1 MGP_129S1SvImJ_G0003143.1 mouse_genomes_project 12 74185712 74198263 - Gm29587 antisense antisense MGP_129S1SvImJ_T0006478.1 MGP_129S1SvImJ_G0005399.1 mouse_genomes_project 12 108962458 108965243 - Gm16087 lincRNA lincRNA MGP_129S1SvImJ_T0006472.1 MGP_129S1SvImJ_G0005396.1 mouse_genomes_project 12 108537847 108553993 + Gm17033 lincRNA lincRNA MGP_129S1SvImJ_T0006454.1 MGP_129S1SvImJ_G0005379.1 mouse_genomes_project 12 87121145 87136401 - 4732487G21Rik lincRNA lincRNA MGP_129S1SvImJ_T0035652.1 MGP_129S1SvImJ_G0020007.1 mouse_genomes_project 12 100075474 100137527 - MGP_129S1SvImJ_P0035652 Ptpn21 protein_coding protein_coding MGP_129S1SvImJ_T0035653.1 MGP_129S1SvImJ_G0020007.1 mouse_genomes_project 12 100075474 100140286 - MGP_129S1SvImJ_P0035653 Ptpn21 protein_coding protein_coding MGP_129S1SvImJ_T0009814.1 MGP_129S1SvImJ_G0007930.1 mouse_genomes_project 12 69477474 69477584 - Mir681 miRNA miRNA MGP_129S1SvImJ_T0034813.1 MGP_129S1SvImJ_G0019732.1 mouse_genomes_project 12 51330751 51399137 + MGP_129S1SvImJ_P0034813 Arhgap5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0009823.1 MGP_129S1SvImJ_G0007939.1 mouse_genomes_project 12 86509834 86509895 - miRNA miRNA MGP_129S1SvImJ_T0034571.1 MGP_129S1SvImJ_G0019639.1 mouse_genomes_project 12 25120693 25129743 - MGP_129S1SvImJ_P0034571 Sox11 protein_coding protein_coding MGP_129S1SvImJ_T0034460.1 MGP_129S1SvImJ_G0019601.1 mouse_genomes_project 12 8666370 8673218 + MGP_129S1SvImJ_P0034460 Rad51ap2 protein_coding protein_coding MGP_129S1SvImJ_T0000891.1 MGP_129S1SvImJ_G0000824.1 mouse_genomes_project 12 90278087 90281536 - TEC TEC MGP_129S1SvImJ_T0017332.1 MGP_129S1SvImJ_G0015230.1 mouse_genomes_project 12 44070701 44075220 + Gm9921 processed_transcript processed_transcript MGP_129S1SvImJ_T0009868.1 MGP_129S1SvImJ_G0007984.1 mouse_genomes_project 12 111955450 111955511 + Mir380 miRNA miRNA MGP_129S1SvImJ_T0035321.1 MGP_129S1SvImJ_G0019914.1 mouse_genomes_project 12 84187592 84241474 - MGP_129S1SvImJ_P0035321 Zfyve1 protein_coding protein_coding MGP_129S1SvImJ_T0009817.1 MGP_129S1SvImJ_G0007933.1 mouse_genomes_project 12 75967754 75967834 + Mir5101 miRNA miRNA MGP_129S1SvImJ_T0035683.1 MGP_129S1SvImJ_G0020014.1 mouse_genomes_project 12 101417615 101516211 + MGP_129S1SvImJ_P0035683 Kcnk13 protein_coding protein_coding MGP_129S1SvImJ_T0035684.1 MGP_129S1SvImJ_G0020014.1 mouse_genomes_project 12 101417615 101516211 + MGP_129S1SvImJ_P0035684 Kcnk13 protein_coding protein_coding MGP_129S1SvImJ_T0035685.1 MGP_129S1SvImJ_G0020014.1 mouse_genomes_project 12 101417621 101419397 + MGP_129S1SvImJ_P0035685 Kcnk13 protein_coding protein_coding MGP_129S1SvImJ_T0035686.1 MGP_129S1SvImJ_G0020014.1 mouse_genomes_project 12 101417641 101516203 + MGP_129S1SvImJ_P0035686 Kcnk13 protein_coding protein_coding MGP_129S1SvImJ_T0035757.1 MGP_129S1SvImJ_G0020039.1 mouse_genomes_project 12 104411071 104416315 - MGP_129S1SvImJ_P0035757 AK010878 protein_coding protein_coding MGP_129S1SvImJ_T0035758.1 MGP_129S1SvImJ_G0020039.1 mouse_genomes_project 12 104414797 104416318 - MGP_129S1SvImJ_P0035758 AK010878 protein_coding protein_coding MGP_129S1SvImJ_T0035557.1 MGP_129S1SvImJ_G0019982.1 mouse_genomes_project 12 88119895 88137633 - MGP_129S1SvImJ_P0035557 Noxred1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0009869.1 MGP_129S1SvImJ_G0007985.1 mouse_genomes_project 12 111955964 111956084 + Mir1197 miRNA miRNA MGP_129S1SvImJ_T0009818.1 MGP_129S1SvImJ_G0007934.1 mouse_genomes_project 12 76665604 76665683 - Mir5135 miRNA miRNA MGP_129S1SvImJ_T0003443.1 MGP_129S1SvImJ_G0003160.1 mouse_genomes_project 12 104991094 104992733 - Gm29508 antisense antisense MGP_129S1SvImJ_T0003444.1 MGP_129S1SvImJ_G0003160.1 mouse_genomes_project 12 104991095 104993497 - Gm29508 antisense antisense MGP_129S1SvImJ_T0006448.1 MGP_129S1SvImJ_G0005373.1 mouse_genomes_project 12 81296493 81298493 - Gm26545 lincRNA lincRNA MGP_129S1SvImJ_T0036101.1 MGP_129S1SvImJ_G0020161.1 mouse_genomes_project 12 115278777 115285512 + MGP_129S1SvImJ_P0036101 BC022687 protein_coding protein_coding MGP_129S1SvImJ_T0036102.1 MGP_129S1SvImJ_G0020161.1 mouse_genomes_project 12 115278777 115286047 + MGP_129S1SvImJ_P0036102 BC022687 protein_coding protein_coding MGP_129S1SvImJ_T0034364.1 MGP_129S1SvImJ_G0019563.1 mouse_genomes_project 12 941020 968999 + MGP_129S1SvImJ_P0034364 Dnajc27 protein_coding protein_coding MGP_129S1SvImJ_T0034365.1 MGP_129S1SvImJ_G0019563.1 mouse_genomes_project 12 941075 967591 + MGP_129S1SvImJ_P0034365 Dnajc27 protein_coding protein_coding MGP_129S1SvImJ_T0098472.1 MGP_129S1SvImJ_G0036557.1 mouse_genomes_project 12 67100252 67100371 - n-R5s60 rRNA rRNA MGP_129S1SvImJ_T0003446.1 MGP_129S1SvImJ_G0003162.1 mouse_genomes_project 12 105543158 105546758 + B430119L08Rik antisense antisense MGP_129S1SvImJ_T0034971.1 MGP_129S1SvImJ_G0019793.1 mouse_genomes_project 12 68975027 68979712 + Klhdc2 protein_coding retained_intron MGP_129S1SvImJ_T0034972.1 MGP_129S1SvImJ_G0019793.1 mouse_genomes_project 12 68975068 68990194 + MGP_129S1SvImJ_P0034972 Klhdc2 protein_coding protein_coding MGP_129S1SvImJ_T0034973.1 MGP_129S1SvImJ_G0019793.1 mouse_genomes_project 12 68975101 68988122 + Klhdc2 protein_coding retained_intron MGP_129S1SvImJ_T0034974.1 MGP_129S1SvImJ_G0019793.1 mouse_genomes_project 12 68980990 68988150 + Klhdc2 protein_coding retained_intron MGP_129S1SvImJ_T0036169.1 MGP_129S1SvImJ_G0020186.1 mouse_genomes_project 12 120819998 121021521 - MGP_129S1SvImJ_P0036169 Dnah11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036170.1 MGP_129S1SvImJ_G0020186.1 mouse_genomes_project 12 120819998 121166438 - MGP_129S1SvImJ_P0036170 Dnah11 protein_coding protein_coding MGP_129S1SvImJ_T0036171.1 MGP_129S1SvImJ_G0020186.1 mouse_genomes_project 12 120845419 120859435 - Dnah11 protein_coding retained_intron MGP_129S1SvImJ_T0036172.1 MGP_129S1SvImJ_G0020186.1 mouse_genomes_project 12 120845435 120859664 - Dnah11 protein_coding processed_transcript MGP_129S1SvImJ_T0035899.1 MGP_129S1SvImJ_G0020098.1 mouse_genomes_project 12 109527813 109528818 + MGP_129S1SvImJ_P0035899 3110018I06Rik protein_coding protein_coding MGP_129S1SvImJ_T0034657.1 MGP_129S1SvImJ_G0019669.1 mouse_genomes_project 12 30160176 30209439 - MGP_129S1SvImJ_P0034657 Pik3cg protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034658.1 MGP_129S1SvImJ_G0019669.1 mouse_genomes_project 12 30160875 30209487 - MGP_129S1SvImJ_P0034658 Pik3cg protein_coding protein_coding MGP_129S1SvImJ_T0034659.1 MGP_129S1SvImJ_G0019669.1 mouse_genomes_project 12 30163642 30209302 - MGP_129S1SvImJ_P0034659 Pik3cg protein_coding protein_coding MGP_129S1SvImJ_T0034660.1 MGP_129S1SvImJ_G0019669.1 mouse_genomes_project 12 30201384 30201843 - Pik3cg protein_coding retained_intron MGP_129S1SvImJ_T0098464.1 MGP_129S1SvImJ_G0036549.1 mouse_genomes_project 12 9902075 9902180 - Gm27952 rRNA rRNA MGP_129S1SvImJ_T0036076.1 MGP_129S1SvImJ_G0020152.1 mouse_genomes_project 12 114953807 114964784 - MGP_129S1SvImJ_P0036076 Tmem179 protein_coding protein_coding MGP_129S1SvImJ_T0034388.1 MGP_129S1SvImJ_G0019573.1 mouse_genomes_project 12 1679777 1688791 + MGP_129S1SvImJ_P0034388 Pfn4 protein_coding protein_coding MGP_129S1SvImJ_T0034389.1 MGP_129S1SvImJ_G0019573.1 mouse_genomes_project 12 1679933 1688763 + MGP_129S1SvImJ_P0034389 Pfn4 protein_coding protein_coding MGP_129S1SvImJ_T0034892.1 MGP_129S1SvImJ_G0019766.1 mouse_genomes_project 12 58207222 58222276 + MGP_129S1SvImJ_P0034892 Gemin2 protein_coding protein_coding MGP_129S1SvImJ_T0034893.1 MGP_129S1SvImJ_G0019766.1 mouse_genomes_project 12 58207283 58222205 + Gemin2 protein_coding retained_intron MGP_129S1SvImJ_T0034894.1 MGP_129S1SvImJ_G0019766.1 mouse_genomes_project 12 58218473 58221693 + Gemin2 protein_coding retained_intron MGP_129S1SvImJ_T0035726.1 MGP_129S1SvImJ_G0020027.1 mouse_genomes_project 12 103522681 103563869 - MGP_129S1SvImJ_P0035726 Atxn3 protein_coding protein_coding MGP_129S1SvImJ_T0035727.1 MGP_129S1SvImJ_G0020027.1 mouse_genomes_project 12 103526859 103538131 - MGP_129S1SvImJ_P0035727 Atxn3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035728.1 MGP_129S1SvImJ_G0020027.1 mouse_genomes_project 12 103536700 103563866 - MGP_129S1SvImJ_P0035728 Atxn3 protein_coding protein_coding MGP_129S1SvImJ_T0035729.1 MGP_129S1SvImJ_G0020027.1 mouse_genomes_project 12 103536702 103563866 - MGP_129S1SvImJ_P0035729 Atxn3 protein_coding protein_coding MGP_129S1SvImJ_T0035730.1 MGP_129S1SvImJ_G0020027.1 mouse_genomes_project 12 103536725 103563771 - MGP_129S1SvImJ_P0035730 Atxn3 protein_coding protein_coding MGP_129S1SvImJ_T0035900.1 MGP_129S1SvImJ_G0020099.1 mouse_genomes_project 12 109984198 110085474 - MGP_129S1SvImJ_P0035900 Bcl11b protein_coding protein_coding MGP_129S1SvImJ_T0035901.1 MGP_129S1SvImJ_G0020099.1 mouse_genomes_project 12 109989227 110085286 - MGP_129S1SvImJ_P0035901 Bcl11b protein_coding protein_coding MGP_129S1SvImJ_T0035902.1 MGP_129S1SvImJ_G0020099.1 mouse_genomes_project 12 109989227 110085286 - MGP_129S1SvImJ_P0035902 Bcl11b protein_coding protein_coding MGP_129S1SvImJ_T0035220.1 MGP_129S1SvImJ_G0019885.1 mouse_genomes_project 12 80446677 80452178 - MGP_129S1SvImJ_P0035220 Zfp36l1 protein_coding protein_coding MGP_129S1SvImJ_T0035221.1 MGP_129S1SvImJ_G0019885.1 mouse_genomes_project 12 80447715 80452163 - MGP_129S1SvImJ_P0035221 Zfp36l1 protein_coding protein_coding MGP_129S1SvImJ_T0100582.1 MGP_129S1SvImJ_G0038649.1 mouse_genomes_project 12 78405682 78405803 + Gm24994 snoRNA snoRNA MGP_129S1SvImJ_T0100547.1 MGP_129S1SvImJ_G0038614.1 mouse_genomes_project 12 6758523 6758651 - Gm23979 snoRNA snoRNA MGP_129S1SvImJ_T0035820.1 MGP_129S1SvImJ_G0020060.1 mouse_genomes_project 12 105685364 105696153 - MGP_129S1SvImJ_P0035820 protein_coding protein_coding MGP_129S1SvImJ_T0012820.1 MGP_129S1SvImJ_G0010909.1 mouse_genomes_project 12 56830885 56831323 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0035075.1 MGP_129S1SvImJ_G0019827.1 mouse_genomes_project 12 72450107 72469531 - MGP_129S1SvImJ_P0035075 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0009792.1 MGP_129S1SvImJ_G0007908.1 mouse_genomes_project 12 8494160 8494218 + Mir7675 miRNA miRNA MGP_129S1SvImJ_T0012851.1 MGP_129S1SvImJ_G0010940.1 mouse_genomes_project 12 103509783 103510243 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003394.1 MGP_129S1SvImJ_G0003125.1 mouse_genomes_project 12 7842 13762 + Rab10os antisense antisense MGP_129S1SvImJ_T0003395.1 MGP_129S1SvImJ_G0003125.1 mouse_genomes_project 12 7864 22729 + Rab10os antisense antisense MGP_129S1SvImJ_T0003396.1 MGP_129S1SvImJ_G0003125.1 mouse_genomes_project 12 7864 10625 + Rab10os antisense antisense MGP_129S1SvImJ_T0003397.1 MGP_129S1SvImJ_G0003125.1 mouse_genomes_project 12 8142 22728 + Rab10os antisense antisense MGP_129S1SvImJ_T0003398.1 MGP_129S1SvImJ_G0003125.1 mouse_genomes_project 12 8183 11586 + Rab10os antisense antisense MGP_129S1SvImJ_T0003399.1 MGP_129S1SvImJ_G0003125.1 mouse_genomes_project 12 8266 22296 + Rab10os antisense antisense MGP_129S1SvImJ_T0003400.1 MGP_129S1SvImJ_G0003125.1 mouse_genomes_project 12 8962 22351 + Rab10os antisense antisense MGP_129S1SvImJ_T0035689.1 MGP_129S1SvImJ_G0020017.1 mouse_genomes_project 12 101667548 101677917 + MGP_129S1SvImJ_P0035689 Calm1 protein_coding protein_coding MGP_129S1SvImJ_T0035690.1 MGP_129S1SvImJ_G0020017.1 mouse_genomes_project 12 101667642 101672051 + Calm1 protein_coding retained_intron MGP_129S1SvImJ_T0035691.1 MGP_129S1SvImJ_G0020017.1 mouse_genomes_project 12 101668257 101677917 + MGP_129S1SvImJ_P0035691 Calm1 protein_coding protein_coding MGP_129S1SvImJ_T0035692.1 MGP_129S1SvImJ_G0020017.1 mouse_genomes_project 12 101673516 101674609 + Calm1 protein_coding retained_intron MGP_129S1SvImJ_T0017345.1 MGP_129S1SvImJ_G0015240.1 mouse_genomes_project 12 105732582 105745117 - Gm28577 processed_transcript processed_transcript MGP_129S1SvImJ_T0011359.1 MGP_129S1SvImJ_G0009475.1 mouse_genomes_project 12 111766399 111766482 + Gm27596 misc_RNA misc_RNA MGP_129S1SvImJ_T0009841.1 MGP_129S1SvImJ_G0007957.1 mouse_genomes_project 12 111771750 111771830 + Mir1906-2 miRNA miRNA MGP_129S1SvImJ_T0035375.1 MGP_129S1SvImJ_G0019929.1 mouse_genomes_project 12 84829702 84832061 - MGP_129S1SvImJ_P0035375 Pnma1 protein_coding protein_coding MGP_129S1SvImJ_T0035162.1 MGP_129S1SvImJ_G0019858.1 mouse_genomes_project 12 76515817 76518576 + MGP_129S1SvImJ_P0035162 Hspa2 protein_coding protein_coding MGP_129S1SvImJ_T0012870.1 MGP_129S1SvImJ_G0010959.1 mouse_genomes_project 12 118852366 118853701 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034497.1 MGP_129S1SvImJ_G0019615.1 mouse_genomes_project 12 14411172 14419431 - MGP_129S1SvImJ_P0034497 2410004P03Rik protein_coding protein_coding MGP_129S1SvImJ_T0034498.1 MGP_129S1SvImJ_G0019615.1 mouse_genomes_project 12 14413445 14419258 - MGP_129S1SvImJ_P0034498 2410004P03Rik protein_coding protein_coding MGP_129S1SvImJ_T0034499.1 MGP_129S1SvImJ_G0019615.1 mouse_genomes_project 12 14414994 14419207 - MGP_129S1SvImJ_P0034499 2410004P03Rik protein_coding protein_coding MGP_129S1SvImJ_T0035150.1 MGP_129S1SvImJ_G0019853.1 mouse_genomes_project 12 76293124 76337328 - MGP_129S1SvImJ_P0035150 Tex21 protein_coding protein_coding MGP_129S1SvImJ_T0006486.1 MGP_129S1SvImJ_G0005406.1 mouse_genomes_project 12 110414176 110439514 - lincRNA lincRNA MGP_129S1SvImJ_T0009852.1 MGP_129S1SvImJ_G0007968.1 mouse_genomes_project 12 111821870 111821994 + Mir433 miRNA miRNA MGP_129S1SvImJ_T0006516.1 MGP_129S1SvImJ_G0005415.1 mouse_genomes_project 12 113180037 113182978 - Gm26912 lincRNA lincRNA MGP_129S1SvImJ_T0009862.1 MGP_129S1SvImJ_G0007978.1 mouse_genomes_project 12 111922474 111922551 + Mir882 miRNA miRNA MGP_129S1SvImJ_T0035713.1 MGP_129S1SvImJ_G0020023.1 mouse_genomes_project 12 102535629 102588641 - MGP_129S1SvImJ_P0035713 Smek1 protein_coding protein_coding MGP_129S1SvImJ_T0035714.1 MGP_129S1SvImJ_G0020023.1 mouse_genomes_project 12 102535629 102588641 - MGP_129S1SvImJ_P0035714 Smek1 protein_coding protein_coding MGP_129S1SvImJ_T0100607.1 MGP_129S1SvImJ_G0038674.1 mouse_genomes_project 12 111920222 111920291 + AF357428 snoRNA snoRNA MGP_129S1SvImJ_T0006460.1 MGP_129S1SvImJ_G0005385.1 mouse_genomes_project 12 100592093 100593500 + Gm28933 lincRNA lincRNA MGP_129S1SvImJ_T0011340.1 MGP_129S1SvImJ_G0009456.1 mouse_genomes_project 12 8889771 8890079 - Gm23781 misc_RNA misc_RNA MGP_129S1SvImJ_T0009916.1 MGP_129S1SvImJ_G0008032.1 mouse_genomes_project 12 115983286 115983350 - Gm24022 miRNA miRNA MGP_129S1SvImJ_T0034963.1 MGP_129S1SvImJ_G0019788.1 mouse_genomes_project 12 68846558 68849172 + MGP_129S1SvImJ_P0034963 Mgat2 protein_coding protein_coding MGP_129S1SvImJ_T0034413.1 MGP_129S1SvImJ_G0019583.1 mouse_genomes_project 12 5333659 5337680 - MGP_129S1SvImJ_P0034413 Gdf7 protein_coding protein_coding MGP_129S1SvImJ_T0100612.1 MGP_129S1SvImJ_G0038679.1 mouse_genomes_project 12 111925232 111925305 + Gm23787 snoRNA snoRNA MGP_129S1SvImJ_T0034373.1 MGP_129S1SvImJ_G0019565.1 mouse_genomes_project 12 1063754 1084159 - MGP_129S1SvImJ_P0034373 Cenpo protein_coding protein_coding MGP_129S1SvImJ_T0034374.1 MGP_129S1SvImJ_G0019565.1 mouse_genomes_project 12 1065572 1104372 - MGP_129S1SvImJ_P0034374 Cenpo protein_coding protein_coding MGP_129S1SvImJ_T0034376.1 MGP_129S1SvImJ_G0019565.1 mouse_genomes_project 12 1081094 1084119 - Cenpo protein_coding retained_intron MGP_129S1SvImJ_T0034377.1 MGP_129S1SvImJ_G0019565.1 mouse_genomes_project 12 1081163 1104349 - MGP_129S1SvImJ_P0034377 Cenpo protein_coding protein_coding MGP_129S1SvImJ_T0034378.1 MGP_129S1SvImJ_G0019565.1 mouse_genomes_project 12 1082970 1102410 - MGP_129S1SvImJ_P0034378 Cenpo protein_coding protein_coding MGP_129S1SvImJ_T0034379.1 MGP_129S1SvImJ_G0019565.1 mouse_genomes_project 12 1083304 1104345 - Cenpo protein_coding retained_intron MGP_129S1SvImJ_T0009903.1 MGP_129S1SvImJ_G0008019.1 mouse_genomes_project 12 111986926 111987006 + Mir412 miRNA miRNA MGP_129S1SvImJ_T0000266.1 MGP_129S1SvImJ_G0000208.1 mouse_genomes_project 12 116675496 116675792 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0009806.1 MGP_129S1SvImJ_G0007922.1 mouse_genomes_project 12 53571137 53571217 - Mir1892 miRNA miRNA MGP_129S1SvImJ_T0009853.1 MGP_129S1SvImJ_G0007969.1 mouse_genomes_project 12 111823001 111823071 + Mir127 miRNA miRNA MGP_129S1SvImJ_T0017346.1 MGP_129S1SvImJ_G0015241.1 mouse_genomes_project 12 111833930 111837476 + Rian processed_transcript lincRNA MGP_129S1SvImJ_T0017347.1 MGP_129S1SvImJ_G0015241.1 mouse_genomes_project 12 111833935 111879442 + Rian processed_transcript lincRNA MGP_129S1SvImJ_T0017348.1 MGP_129S1SvImJ_G0015241.1 mouse_genomes_project 12 111834036 111861382 + Rian processed_transcript lincRNA MGP_129S1SvImJ_T0017349.1 MGP_129S1SvImJ_G0015241.1 mouse_genomes_project 12 111854654 111880387 + Rian processed_transcript lincRNA MGP_129S1SvImJ_T0017350.1 MGP_129S1SvImJ_G0015241.1 mouse_genomes_project 12 111854654 111868279 + Rian processed_transcript lincRNA MGP_129S1SvImJ_T0017351.1 MGP_129S1SvImJ_G0015241.1 mouse_genomes_project 12 111859462 111879508 + Rian processed_transcript lincRNA MGP_129S1SvImJ_T0017352.1 MGP_129S1SvImJ_G0015241.1 mouse_genomes_project 12 111866844 111870320 + Rian processed_transcript lincRNA MGP_129S1SvImJ_T0017353.1 MGP_129S1SvImJ_G0015241.1 mouse_genomes_project 12 111868005 111877511 + Rian processed_transcript lincRNA MGP_129S1SvImJ_T0017354.1 MGP_129S1SvImJ_G0015241.1 mouse_genomes_project 12 111868249 111880310 + Rian processed_transcript lincRNA MGP_129S1SvImJ_T0017355.1 MGP_129S1SvImJ_G0015241.1 mouse_genomes_project 12 111877988 111879489 + Rian processed_transcript TEC MGP_129S1SvImJ_T0017356.1 MGP_129S1SvImJ_G0015241.1 mouse_genomes_project 12 111880187 111902020 + Rian processed_transcript lincRNA MGP_129S1SvImJ_T0017357.1 MGP_129S1SvImJ_G0015241.1 mouse_genomes_project 12 111880208 111889056 + Rian processed_transcript lincRNA MGP_129S1SvImJ_T0017358.1 MGP_129S1SvImJ_G0015241.1 mouse_genomes_project 12 111880687 111894815 + Rian processed_transcript lincRNA MGP_129S1SvImJ_T0017359.1 MGP_129S1SvImJ_G0015241.1 mouse_genomes_project 12 111883217 111884398 + Rian processed_transcript lincRNA MGP_129S1SvImJ_T0017360.1 MGP_129S1SvImJ_G0015241.1 mouse_genomes_project 12 111884115 111889916 + Rian processed_transcript lincRNA MGP_129S1SvImJ_T0017361.1 MGP_129S1SvImJ_G0015241.1 mouse_genomes_project 12 111884727 111896033 + Rian processed_transcript lincRNA MGP_129S1SvImJ_T0017362.1 MGP_129S1SvImJ_G0015241.1 mouse_genomes_project 12 111884731 111889937 + Rian processed_transcript lincRNA MGP_129S1SvImJ_T0017363.1 MGP_129S1SvImJ_G0015241.1 mouse_genomes_project 12 111885059 111894761 + Rian processed_transcript lincRNA MGP_129S1SvImJ_T0017364.1 MGP_129S1SvImJ_G0015241.1 mouse_genomes_project 12 111891334 111894138 + Rian processed_transcript TEC MGP_129S1SvImJ_T0000265.1 MGP_129S1SvImJ_G0000207.1 mouse_genomes_project 12 116601906 116602368 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0034514.1 MGP_129S1SvImJ_G0019619.1 mouse_genomes_project 12 14779216 14864427 + MGP_129S1SvImJ_P0034514 Nol10 protein_coding protein_coding MGP_129S1SvImJ_T0102173.1 MGP_129S1SvImJ_G0040007.1 mouse_genomes_project 12 105561139 105612985 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0036166.1 MGP_129S1SvImJ_G0020185.1 mouse_genomes_project 12 120781286 120820723 + MGP_129S1SvImJ_P0036166 Cdca7l protein_coding protein_coding MGP_129S1SvImJ_T0036167.1 MGP_129S1SvImJ_G0020185.1 mouse_genomes_project 12 120781655 120815776 + MGP_129S1SvImJ_P0036167 Cdca7l protein_coding protein_coding MGP_129S1SvImJ_T0036168.1 MGP_129S1SvImJ_G0020185.1 mouse_genomes_project 12 120781659 120817648 + MGP_129S1SvImJ_P0036168 Cdca7l protein_coding protein_coding MGP_129S1SvImJ_T0035367.1 MGP_129S1SvImJ_G0019927.1 mouse_genomes_project 12 84782689 84793366 + MGP_129S1SvImJ_P0035367 Acot6 protein_coding protein_coding MGP_129S1SvImJ_T0035359.1 MGP_129S1SvImJ_G0019922.1 mouse_genomes_project 12 84679697 84688635 + MGP_129S1SvImJ_P0035359 protein_coding protein_coding MGP_129S1SvImJ_T0098482.1 MGP_129S1SvImJ_G0036567.1 mouse_genomes_project 12 122920774 122920892 - Gm25675 rRNA rRNA MGP_129S1SvImJ_T0009820.1 MGP_129S1SvImJ_G0007936.1 mouse_genomes_project 12 80752764 80752829 - Mir1843a miRNA miRNA MGP_129S1SvImJ_T0009822.1 MGP_129S1SvImJ_G0007938.1 mouse_genomes_project 12 86012326 86012389 - Mir6938 miRNA miRNA MGP_129S1SvImJ_T0035852.1 MGP_129S1SvImJ_G0020079.1 mouse_genomes_project 12 106496585 106561133 - MGP_129S1SvImJ_P0035852 Dicer1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0009898.1 MGP_129S1SvImJ_G0008014.1 mouse_genomes_project 12 111982756 111982835 + Mir496a miRNA miRNA MGP_129S1SvImJ_T0034542.1 MGP_129S1SvImJ_G0019629.1 mouse_genomes_project 12 22250361 22298254 + MGP_129S1SvImJ_P0034542 Grhl1 protein_coding protein_coding MGP_129S1SvImJ_T0034543.1 MGP_129S1SvImJ_G0019629.1 mouse_genomes_project 12 22260252 22298258 + MGP_129S1SvImJ_P0034543 Grhl1 protein_coding protein_coding MGP_129S1SvImJ_T0000889.1 MGP_129S1SvImJ_G0000822.1 mouse_genomes_project 12 85857027 85858597 - TEC TEC MGP_129S1SvImJ_T0006452.1 MGP_129S1SvImJ_G0005377.1 mouse_genomes_project 12 86774081 86791421 - Gm26531 lincRNA lincRNA MGP_129S1SvImJ_T0003426.1 MGP_129S1SvImJ_G0003144.1 mouse_genomes_project 12 80296237 80296542 + Gm28056 antisense antisense MGP_129S1SvImJ_T0100558.1 MGP_129S1SvImJ_G0038625.1 mouse_genomes_project 12 31516866 31516998 - Gm23529 snoRNA snoRNA MGP_129S1SvImJ_T0035592.1 MGP_129S1SvImJ_G0019995.1 mouse_genomes_project 12 89707380 90288985 + Nrxn3 protein_coding retained_intron MGP_129S1SvImJ_T0035593.1 MGP_129S1SvImJ_G0019995.1 mouse_genomes_project 12 89707392 89851526 + Nrxn3 protein_coding retained_intron MGP_129S1SvImJ_T0035594.1 MGP_129S1SvImJ_G0019995.1 mouse_genomes_project 12 89707490 91429958 + MGP_129S1SvImJ_P0035594 Nrxn3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035595.1 MGP_129S1SvImJ_G0019995.1 mouse_genomes_project 12 89707613 91429977 + MGP_129S1SvImJ_P0035595 Nrxn3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035596.1 MGP_129S1SvImJ_G0019995.1 mouse_genomes_project 12 89709541 89786205 + Nrxn3 protein_coding processed_transcript MGP_129S1SvImJ_T0035597.1 MGP_129S1SvImJ_G0019995.1 mouse_genomes_project 12 89710213 89786071 + Nrxn3 protein_coding processed_transcript MGP_129S1SvImJ_T0035598.1 MGP_129S1SvImJ_G0019995.1 mouse_genomes_project 12 89784932 89853795 + MGP_129S1SvImJ_P0035598 Nrxn3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035599.1 MGP_129S1SvImJ_G0019995.1 mouse_genomes_project 12 89785593 91432015 + MGP_129S1SvImJ_P0035599 Nrxn3 protein_coding protein_coding MGP_129S1SvImJ_T0035600.1 MGP_129S1SvImJ_G0019995.1 mouse_genomes_project 12 89786528 89853918 + Nrxn3 protein_coding processed_transcript MGP_129S1SvImJ_T0035601.1 MGP_129S1SvImJ_G0019995.1 mouse_genomes_project 12 89958290 90208153 + Nrxn3 protein_coding processed_transcript MGP_129S1SvImJ_T0035602.1 MGP_129S1SvImJ_G0019995.1 mouse_genomes_project 12 89958299 91430140 + MGP_129S1SvImJ_P0035602 Nrxn3 protein_coding protein_coding MGP_129S1SvImJ_T0035603.1 MGP_129S1SvImJ_G0019995.1 mouse_genomes_project 12 90213940 91429490 + MGP_129S1SvImJ_P0035603 Nrxn3 protein_coding protein_coding MGP_129S1SvImJ_T0035604.1 MGP_129S1SvImJ_G0019995.1 mouse_genomes_project 12 90867246 91430523 + MGP_129S1SvImJ_P0035604 Nrxn3 protein_coding protein_coding MGP_129S1SvImJ_T0035605.1 MGP_129S1SvImJ_G0019995.1 mouse_genomes_project 12 90867246 91429979 + MGP_129S1SvImJ_P0035605 Nrxn3 protein_coding protein_coding MGP_129S1SvImJ_T0000259.1 MGP_129S1SvImJ_G0000201.1 mouse_genomes_project 12 116383873 116384189 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0035831.1 MGP_129S1SvImJ_G0020066.1 mouse_genomes_project 12 105858610 105863616 + MGP_129S1SvImJ_P0035831 Serpina5 protein_coding protein_coding MGP_129S1SvImJ_T0034837.1 MGP_129S1SvImJ_G0019743.1 mouse_genomes_project 12 54048159 54070178 + MGP_129S1SvImJ_P0034837 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034839.1 MGP_129S1SvImJ_G0019743.1 mouse_genomes_project 12 54049836 54116736 + MGP_129S1SvImJ_P0034839 protein_coding protein_coding MGP_129S1SvImJ_T0003445.1 MGP_129S1SvImJ_G0003161.1 mouse_genomes_project 12 105015638 105026963 + Gm15523 antisense antisense MGP_129S1SvImJ_T0100553.1 MGP_129S1SvImJ_G0038620.1 mouse_genomes_project 12 22462603 22462732 + Gm26211 snoRNA snoRNA MGP_129S1SvImJ_T0100567.1 MGP_129S1SvImJ_G0038634.1 mouse_genomes_project 12 48306077 48306205 - Gm25015 snoRNA snoRNA MGP_129S1SvImJ_T0006444.1 MGP_129S1SvImJ_G0005369.1 mouse_genomes_project 12 80447163 80452165 + Gm26669 lincRNA lincRNA MGP_129S1SvImJ_T0098481.1 MGP_129S1SvImJ_G0036566.1 mouse_genomes_project 12 120496348 120496454 + Gm24741 rRNA rRNA MGP_129S1SvImJ_T0035488.1 MGP_129S1SvImJ_G0019965.1 mouse_genomes_project 12 86622256 86632155 - MGP_129S1SvImJ_P0035488 0610007P14Rik protein_coding protein_coding MGP_129S1SvImJ_T0035489.1 MGP_129S1SvImJ_G0019965.1 mouse_genomes_project 12 86622467 86632145 - 0610007P14Rik protein_coding processed_transcript MGP_129S1SvImJ_T0035490.1 MGP_129S1SvImJ_G0019965.1 mouse_genomes_project 12 86625905 86632177 - 0610007P14Rik protein_coding retained_intron MGP_129S1SvImJ_T0035491.1 MGP_129S1SvImJ_G0019965.1 mouse_genomes_project 12 86626140 86629883 - 0610007P14Rik protein_coding retained_intron MGP_129S1SvImJ_T0035492.1 MGP_129S1SvImJ_G0019965.1 mouse_genomes_project 12 86626347 86632183 - MGP_129S1SvImJ_P0035492 0610007P14Rik protein_coding protein_coding MGP_129S1SvImJ_T0099323.1 MGP_129S1SvImJ_G0037390.1 mouse_genomes_project 12 67223103 67223289 + Gm26256 snRNA snRNA MGP_129S1SvImJ_T0000264.1 MGP_129S1SvImJ_G0000206.1 mouse_genomes_project 12 116559869 116560167 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0100606.1 MGP_129S1SvImJ_G0038673.1 mouse_genomes_project 12 111914216 111914298 + Gm23347 snoRNA snoRNA MGP_129S1SvImJ_T0099339.1 MGP_129S1SvImJ_G0037406.1 mouse_genomes_project 12 102253167 102253273 - Gm25801 snRNA snRNA MGP_129S1SvImJ_T0034414.1 MGP_129S1SvImJ_G0019584.1 mouse_genomes_project 12 5350272 5382326 + MGP_129S1SvImJ_P0034414 Hs1bp3 protein_coding protein_coding MGP_129S1SvImJ_T0012819.1 MGP_129S1SvImJ_G0010908.1 mouse_genomes_project 12 56710184 56711766 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000272.1 MGP_129S1SvImJ_G0000214.1 mouse_genomes_project 12 117115384 117115845 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0034711.1 MGP_129S1SvImJ_G0019692.1 mouse_genomes_project 12 34548267 34552551 + MGP_129S1SvImJ_P0034711 Sostdc1 protein_coding protein_coding MGP_129S1SvImJ_T0000080.1 MGP_129S1SvImJ_G0000063.1 mouse_genomes_project 12 116886243 116886680 - MGP_129S1SvImJ_P0000080 Ighv3-5 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000081.1 MGP_129S1SvImJ_G0000063.1 mouse_genomes_project 12 116886243 116886542 - MGP_129S1SvImJ_P0000081 Ighv3-5 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0003414.1 MGP_129S1SvImJ_G0003136.1 mouse_genomes_project 12 55654102 55728698 + Gm26973 antisense antisense MGP_129S1SvImJ_T0003415.1 MGP_129S1SvImJ_G0003136.1 mouse_genomes_project 12 55656016 55691719 + Gm26973 antisense antisense MGP_129S1SvImJ_T0003416.1 MGP_129S1SvImJ_G0003136.1 mouse_genomes_project 12 55656067 55728735 + Gm26973 antisense antisense MGP_129S1SvImJ_T0034474.1 MGP_129S1SvImJ_G0019610.1 mouse_genomes_project 12 14044967 14051684 + MGP_129S1SvImJ_P0034474 Ntsr2 protein_coding protein_coding MGP_129S1SvImJ_T0006433.1 MGP_129S1SvImJ_G0005362.1 mouse_genomes_project 12 58144268 58160243 + Gm17529 lincRNA lincRNA MGP_129S1SvImJ_T0006466.1 MGP_129S1SvImJ_G0005391.1 mouse_genomes_project 12 104375343 104383573 - Gm21971 lincRNA lincRNA MGP_129S1SvImJ_T0000893.1 MGP_129S1SvImJ_G0000826.1 mouse_genomes_project 12 105772129 105777614 - TEC TEC MGP_129S1SvImJ_T0012812.1 MGP_129S1SvImJ_G0010901.1 mouse_genomes_project 12 50089965 50090440 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034853.1 MGP_129S1SvImJ_G0019751.1 mouse_genomes_project 12 54655130 54658232 + MGP_129S1SvImJ_P0034853 Insm2 protein_coding protein_coding MGP_129S1SvImJ_T0006519.1 MGP_129S1SvImJ_G0005417.1 mouse_genomes_project 12 113813743 113817816 - Gm10425 lincRNA lincRNA MGP_129S1SvImJ_T0035126.1 MGP_129S1SvImJ_G0019849.1 mouse_genomes_project 12 75663232 75709166 - MGP_129S1SvImJ_P0035126 Wdr89 protein_coding protein_coding MGP_129S1SvImJ_T0035127.1 MGP_129S1SvImJ_G0019849.1 mouse_genomes_project 12 75664675 75709156 - MGP_129S1SvImJ_P0035127 Wdr89 protein_coding protein_coding MGP_129S1SvImJ_T0100614.1 MGP_129S1SvImJ_G0038681.1 mouse_genomes_project 12 111929390 111929461 + Gm22205 snoRNA snoRNA MGP_129S1SvImJ_T0009854.1 MGP_129S1SvImJ_G0007970.1 mouse_genomes_project 12 111824613 111824755 + Mir434 miRNA miRNA MGP_129S1SvImJ_T0098467.1 MGP_129S1SvImJ_G0036552.1 mouse_genomes_project 12 26890056 26890171 - Gm23342 rRNA rRNA MGP_129S1SvImJ_T0035933.1 MGP_129S1SvImJ_G0020110.1 mouse_genomes_project 12 111011851 111017537 + MGP_129S1SvImJ_P0035933 Slc25a47 protein_coding protein_coding MGP_129S1SvImJ_T0017333.1 MGP_129S1SvImJ_G0015231.1 mouse_genomes_project 12 71100604 71106082 - 4930474H06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0003447.1 MGP_129S1SvImJ_G0003163.1 mouse_genomes_project 12 111210003 111210472 + Gm28498 antisense antisense MGP_129S1SvImJ_T0000068.1 MGP_129S1SvImJ_G0000054.1 mouse_genomes_project 12 116555697 116556127 - MGP_129S1SvImJ_P0000068 Ighv3-1 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0098470.1 MGP_129S1SvImJ_G0036555.1 mouse_genomes_project 12 53591637 53591747 - Gm24971 rRNA rRNA MGP_129S1SvImJ_T0036112.1 MGP_129S1SvImJ_G0020170.1 mouse_genomes_project 12 115566023 115581390 + MGP_129S1SvImJ_P0036112 Tex22 protein_coding protein_coding MGP_129S1SvImJ_T0036113.1 MGP_129S1SvImJ_G0020170.1 mouse_genomes_project 12 115566023 115581388 + MGP_129S1SvImJ_P0036113 Tex22 protein_coding protein_coding MGP_129S1SvImJ_T0036114.1 MGP_129S1SvImJ_G0020170.1 mouse_genomes_project 12 115566277 115581391 + MGP_129S1SvImJ_P0036114 Tex22 protein_coding protein_coding MGP_129S1SvImJ_T0036115.1 MGP_129S1SvImJ_G0020170.1 mouse_genomes_project 12 115566299 115566893 + MGP_129S1SvImJ_P0036115 Tex22 protein_coding protein_coding MGP_129S1SvImJ_T0098475.1 MGP_129S1SvImJ_G0036560.1 mouse_genomes_project 12 83139192 83139295 - n-R5s63 rRNA rRNA MGP_129S1SvImJ_T0035368.1 MGP_129S1SvImJ_G0019928.1 mouse_genomes_project 12 84796923 84823684 + Dnal1 protein_coding processed_transcript MGP_129S1SvImJ_T0035369.1 MGP_129S1SvImJ_G0019928.1 mouse_genomes_project 12 84796923 84827089 + MGP_129S1SvImJ_P0035369 Dnal1 protein_coding protein_coding MGP_129S1SvImJ_T0035370.1 MGP_129S1SvImJ_G0019928.1 mouse_genomes_project 12 84796928 84822303 + MGP_129S1SvImJ_P0035370 Dnal1 protein_coding protein_coding MGP_129S1SvImJ_T0035371.1 MGP_129S1SvImJ_G0019928.1 mouse_genomes_project 12 84796947 84824406 + MGP_129S1SvImJ_P0035371 Dnal1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035372.1 MGP_129S1SvImJ_G0019928.1 mouse_genomes_project 12 84796948 84816538 + MGP_129S1SvImJ_P0035372 Dnal1 protein_coding protein_coding MGP_129S1SvImJ_T0035373.1 MGP_129S1SvImJ_G0019928.1 mouse_genomes_project 12 84809461 84831070 + Dnal1 protein_coding retained_intron MGP_129S1SvImJ_T0035374.1 MGP_129S1SvImJ_G0019928.1 mouse_genomes_project 12 84819529 84820969 + MGP_129S1SvImJ_P0035374 Dnal1 protein_coding protein_coding MGP_129S1SvImJ_T0006500.1 MGP_129S1SvImJ_G0005410.1 mouse_genomes_project 12 111797228 111800324 - Gm26906 lincRNA lincRNA MGP_129S1SvImJ_T0009824.1 MGP_129S1SvImJ_G0007940.1 mouse_genomes_project 12 87917871 87917971 + Gm25847 miRNA miRNA MGP_129S1SvImJ_T0006434.1 MGP_129S1SvImJ_G0005363.1 mouse_genomes_project 12 69562856 69568823 + 4931403G20Rik lincRNA lincRNA MGP_129S1SvImJ_T0034610.1 MGP_129S1SvImJ_G0019655.1 mouse_genomes_project 12 28834059 28886934 + Sh3yl1 protein_coding retained_intron MGP_129S1SvImJ_T0034611.1 MGP_129S1SvImJ_G0019655.1 mouse_genomes_project 12 28834059 28887078 + MGP_129S1SvImJ_P0034611 Sh3yl1 protein_coding protein_coding MGP_129S1SvImJ_T0034612.1 MGP_129S1SvImJ_G0019655.1 mouse_genomes_project 12 28834083 28887067 + MGP_129S1SvImJ_P0034612 Sh3yl1 protein_coding protein_coding MGP_129S1SvImJ_T0034613.1 MGP_129S1SvImJ_G0019655.1 mouse_genomes_project 12 28834578 28887072 + Sh3yl1 protein_coding processed_transcript MGP_129S1SvImJ_T0035977.1 MGP_129S1SvImJ_G0020121.1 mouse_genomes_project 12 113058476 113139462 + MGP_129S1SvImJ_P0035977 Wdr20 protein_coding protein_coding MGP_129S1SvImJ_T0035978.1 MGP_129S1SvImJ_G0020121.1 mouse_genomes_project 12 113058512 113122683 + MGP_129S1SvImJ_P0035978 Wdr20 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035979.1 MGP_129S1SvImJ_G0020121.1 mouse_genomes_project 12 113058521 113060773 + Wdr20 protein_coding retained_intron MGP_129S1SvImJ_T0035980.1 MGP_129S1SvImJ_G0020121.1 mouse_genomes_project 12 113058524 113126392 + MGP_129S1SvImJ_P0035980 Wdr20 protein_coding protein_coding MGP_129S1SvImJ_T0035981.1 MGP_129S1SvImJ_G0020121.1 mouse_genomes_project 12 113058550 113062784 + Wdr20 protein_coding processed_transcript MGP_129S1SvImJ_T0035982.1 MGP_129S1SvImJ_G0020121.1 mouse_genomes_project 12 113058741 113122855 + MGP_129S1SvImJ_P0035982 Wdr20 protein_coding protein_coding MGP_129S1SvImJ_T0035983.1 MGP_129S1SvImJ_G0020121.1 mouse_genomes_project 12 113125927 113139253 + Wdr20 protein_coding processed_transcript MGP_129S1SvImJ_T0003439.1 MGP_129S1SvImJ_G0003157.1 mouse_genomes_project 12 100745483 100767170 + 3300002A11Rik antisense antisense MGP_129S1SvImJ_T0003440.1 MGP_129S1SvImJ_G0003157.1 mouse_genomes_project 12 100750682 100767170 + 3300002A11Rik antisense antisense MGP_129S1SvImJ_T0035928.1 MGP_129S1SvImJ_G0020108.1 mouse_genomes_project 12 110949676 110974740 + MGP_129S1SvImJ_P0035928 Yy1 protein_coding protein_coding MGP_129S1SvImJ_T0035929.1 MGP_129S1SvImJ_G0020108.1 mouse_genomes_project 12 110964346 110973672 + Yy1 protein_coding retained_intron MGP_129S1SvImJ_T0099329.1 MGP_129S1SvImJ_G0037396.1 mouse_genomes_project 12 77605333 77605432 + Gm24775 snRNA snRNA MGP_129S1SvImJ_T0011342.1 MGP_129S1SvImJ_G0009458.1 mouse_genomes_project 12 30366437 30366755 - Gm23875 misc_RNA misc_RNA MGP_129S1SvImJ_T0036144.1 MGP_129S1SvImJ_G0020176.1 mouse_genomes_project 12 116045581 116048235 + MGP_129S1SvImJ_P0036144 protein_coding protein_coding MGP_129S1SvImJ_T0035427.1 MGP_129S1SvImJ_G0019944.1 mouse_genomes_project 12 85493514 85512070 - MGP_129S1SvImJ_P0035427 Npc2 protein_coding protein_coding MGP_129S1SvImJ_T0003448.1 MGP_129S1SvImJ_G0003164.1 mouse_genomes_project 12 112980332 112980849 - Gm17111 antisense antisense MGP_129S1SvImJ_T0034783.1 MGP_129S1SvImJ_G0019716.1 mouse_genomes_project 12 47271391 47273286 - MGP_129S1SvImJ_P0034783 protein_coding protein_coding MGP_129S1SvImJ_T0099311.1 MGP_129S1SvImJ_G0037378.1 mouse_genomes_project 12 51438631 51438738 - Gm23296 snRNA snRNA MGP_129S1SvImJ_T0006468.1 MGP_129S1SvImJ_G0005393.1 mouse_genomes_project 12 107196919 107245710 + lincRNA lincRNA MGP_129S1SvImJ_T0006469.1 MGP_129S1SvImJ_G0005393.1 mouse_genomes_project 12 107197318 107245708 + lincRNA lincRNA MGP_129S1SvImJ_T0036145.1 MGP_129S1SvImJ_G0020177.1 mouse_genomes_project 12 116099709 116102410 + MGP_129S1SvImJ_P0036145 protein_coding protein_coding MGP_129S1SvImJ_T0006520.1 MGP_129S1SvImJ_G0005418.1 mouse_genomes_project 12 113971386 113973468 - 2810029C07Rik lincRNA lincRNA MGP_129S1SvImJ_T0034691.1 MGP_129S1SvImJ_G0019681.1 mouse_genomes_project 12 33007232 33008287 - MGP_129S1SvImJ_P0034691 protein_coding protein_coding MGP_129S1SvImJ_T0098304.1 MGP_129S1SvImJ_G0036389.1 mouse_genomes_project 12 6541499 6542053 + pseudogene pseudogene MGP_129S1SvImJ_T0035161.1 MGP_129S1SvImJ_G0019857.1 mouse_genomes_project 12 76482034 76508592 + MGP_129S1SvImJ_P0035161 Zbtb1 protein_coding protein_coding MGP_129S1SvImJ_T0035017.1 MGP_129S1SvImJ_G0019809.1 mouse_genomes_project 12 69988727 70092289 - MGP_129S1SvImJ_P0035017 Trim9 protein_coding protein_coding MGP_129S1SvImJ_T0035018.1 MGP_129S1SvImJ_G0019809.1 mouse_genomes_project 12 69988727 70092289 - MGP_129S1SvImJ_P0035018 Trim9 protein_coding protein_coding MGP_129S1SvImJ_T0035019.1 MGP_129S1SvImJ_G0019809.1 mouse_genomes_project 12 69990577 69999357 - MGP_129S1SvImJ_P0035019 Trim9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035020.1 MGP_129S1SvImJ_G0019809.1 mouse_genomes_project 12 70007927 70092289 - MGP_129S1SvImJ_P0035020 Trim9 protein_coding protein_coding MGP_129S1SvImJ_T0035024.1 MGP_129S1SvImJ_G0019811.1 mouse_genomes_project 12 70594924 70673862 + MGP_129S1SvImJ_P0035024 Frmd6 protein_coding protein_coding MGP_129S1SvImJ_T0035025.1 MGP_129S1SvImJ_G0019811.1 mouse_genomes_project 12 70594953 70671630 + MGP_129S1SvImJ_P0035025 Frmd6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0099333.1 MGP_129S1SvImJ_G0037400.1 mouse_genomes_project 12 81003610 81003714 - Gm23817 snRNA snRNA MGP_129S1SvImJ_T0000069.1 MGP_129S1SvImJ_G0000055.1 mouse_genomes_project 12 116572575 116573047 - MGP_129S1SvImJ_P0000069 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000289.1 MGP_129S1SvImJ_G0000231.1 mouse_genomes_project 12 118513428 118513858 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0034976.1 MGP_129S1SvImJ_G0019795.1 mouse_genomes_project 12 69061689 69062313 - MGP_129S1SvImJ_P0034976 Gm9887 protein_coding protein_coding MGP_129S1SvImJ_T0034934.1 MGP_129S1SvImJ_G0019777.1 mouse_genomes_project 12 64441898 64506403 + MGP_129S1SvImJ_P0034934 Fam179b protein_coding protein_coding MGP_129S1SvImJ_T0034935.1 MGP_129S1SvImJ_G0019777.1 mouse_genomes_project 12 64442133 64506409 + MGP_129S1SvImJ_P0034935 Fam179b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034692.1 MGP_129S1SvImJ_G0019682.1 mouse_genomes_project 12 33139736 33141412 + MGP_129S1SvImJ_P0034692 Prps1l1 protein_coding protein_coding MGP_129S1SvImJ_T0006470.1 MGP_129S1SvImJ_G0005394.1 mouse_genomes_project 12 108294286 108297714 + Gm17032 lincRNA lincRNA MGP_129S1SvImJ_T0099303.1 MGP_129S1SvImJ_G0037370.1 mouse_genomes_project 12 11790945 11791052 + Gm25414 snRNA snRNA MGP_129S1SvImJ_T0035687.1 MGP_129S1SvImJ_G0020015.1 mouse_genomes_project 12 101570355 101584193 + MGP_129S1SvImJ_P0035687 Psmc1 protein_coding protein_coding MGP_129S1SvImJ_T0034599.1 MGP_129S1SvImJ_G0019651.1 mouse_genomes_project 12 28057759 28260087 - MGP_129S1SvImJ_P0034599 Sntg2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034600.1 MGP_129S1SvImJ_G0019651.1 mouse_genomes_project 12 28057760 28260134 - MGP_129S1SvImJ_P0034600 Sntg2 protein_coding protein_coding MGP_129S1SvImJ_T0034601.1 MGP_129S1SvImJ_G0019651.1 mouse_genomes_project 12 28058267 28260024 - MGP_129S1SvImJ_P0034601 Sntg2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034602.1 MGP_129S1SvImJ_G0019651.1 mouse_genomes_project 12 28058272 28260087 - MGP_129S1SvImJ_P0034602 Sntg2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034603.1 MGP_129S1SvImJ_G0019651.1 mouse_genomes_project 12 28074891 28081186 - Sntg2 protein_coding retained_intron MGP_129S1SvImJ_T0034604.1 MGP_129S1SvImJ_G0019651.1 mouse_genomes_project 12 28148629 28243798 - Sntg2 protein_coding processed_transcript MGP_129S1SvImJ_T0034605.1 MGP_129S1SvImJ_G0019651.1 mouse_genomes_project 12 28192767 28260102 - Sntg2 protein_coding processed_transcript MGP_129S1SvImJ_T0006437.1 MGP_129S1SvImJ_G0005366.1 mouse_genomes_project 12 74247402 74258925 + lincRNA lincRNA MGP_129S1SvImJ_T0006438.1 MGP_129S1SvImJ_G0005366.1 mouse_genomes_project 12 74247410 74258939 + lincRNA lincRNA MGP_129S1SvImJ_T0006439.1 MGP_129S1SvImJ_G0005366.1 mouse_genomes_project 12 74251856 74258939 + lincRNA lincRNA MGP_129S1SvImJ_T0034416.1 MGP_129S1SvImJ_G0019586.1 mouse_genomes_project 12 5581546 5590723 - MGP_129S1SvImJ_P0034416 Slc7a15 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034417.1 MGP_129S1SvImJ_G0019586.1 mouse_genomes_project 12 5581546 5593194 - MGP_129S1SvImJ_P0034417 Slc7a15 protein_coding protein_coding MGP_129S1SvImJ_T0034418.1 MGP_129S1SvImJ_G0019586.1 mouse_genomes_project 12 5591849 5593215 - Slc7a15 protein_coding processed_transcript MGP_129S1SvImJ_T0035748.1 MGP_129S1SvImJ_G0020034.1 mouse_genomes_project 12 104205327 104354308 - MGP_129S1SvImJ_P0035748 Itpk1 protein_coding protein_coding MGP_129S1SvImJ_T0035749.1 MGP_129S1SvImJ_G0020034.1 mouse_genomes_project 12 104221032 104230801 - Itpk1 protein_coding processed_transcript MGP_129S1SvImJ_T0035750.1 MGP_129S1SvImJ_G0020034.1 mouse_genomes_project 12 104224654 104282149 - MGP_129S1SvImJ_P0035750 Itpk1 protein_coding protein_coding MGP_129S1SvImJ_T0035751.1 MGP_129S1SvImJ_G0020034.1 mouse_genomes_project 12 104260092 104354406 - MGP_129S1SvImJ_P0035751 Itpk1 protein_coding protein_coding MGP_129S1SvImJ_T0035457.1 MGP_129S1SvImJ_G0019951.1 mouse_genomes_project 12 85842639 85853331 - MGP_129S1SvImJ_P0035457 Prox2 protein_coding protein_coding MGP_129S1SvImJ_T0035458.1 MGP_129S1SvImJ_G0019951.1 mouse_genomes_project 12 85843068 85862681 - MGP_129S1SvImJ_P0035458 Prox2 protein_coding protein_coding MGP_129S1SvImJ_T0035459.1 MGP_129S1SvImJ_G0019951.1 mouse_genomes_project 12 85850272 85851865 - Prox2 protein_coding retained_intron MGP_129S1SvImJ_T0012853.1 MGP_129S1SvImJ_G0010942.1 mouse_genomes_project 12 105989681 105990768 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011347.1 MGP_129S1SvImJ_G0009463.1 mouse_genomes_project 12 68820344 68820653 + Rn7s1 misc_RNA misc_RNA MGP_129S1SvImJ_T0009825.1 MGP_129S1SvImJ_G0007941.1 mouse_genomes_project 12 88166501 88166577 + miRNA miRNA MGP_129S1SvImJ_T0035562.1 MGP_129S1SvImJ_G0019985.1 mouse_genomes_project 12 88178338 88202991 - MGP_129S1SvImJ_P0035562 Ism2 protein_coding protein_coding MGP_129S1SvImJ_T0035563.1 MGP_129S1SvImJ_G0019985.1 mouse_genomes_project 12 88179382 88187885 - MGP_129S1SvImJ_P0035563 Ism2 protein_coding protein_coding MGP_129S1SvImJ_T0035564.1 MGP_129S1SvImJ_G0019985.1 mouse_genomes_project 12 88182143 88187821 - Ism2 protein_coding processed_transcript MGP_129S1SvImJ_T0006446.1 MGP_129S1SvImJ_G0005371.1 mouse_genomes_project 12 80872502 80884407 - Gm26777 lincRNA lincRNA MGP_129S1SvImJ_T0034865.1 MGP_129S1SvImJ_G0019758.1 mouse_genomes_project 12 55841917 56355752 - MGP_129S1SvImJ_P0034865 Slc25a21 protein_coding protein_coding MGP_129S1SvImJ_T0034866.1 MGP_129S1SvImJ_G0019758.1 mouse_genomes_project 12 55843078 56317334 - MGP_129S1SvImJ_P0034866 Slc25a21 protein_coding protein_coding MGP_129S1SvImJ_T0034867.1 MGP_129S1SvImJ_G0019758.1 mouse_genomes_project 12 55856539 55901819 - Slc25a21 protein_coding processed_transcript MGP_129S1SvImJ_T0034868.1 MGP_129S1SvImJ_G0019758.1 mouse_genomes_project 12 55899915 56124510 - Slc25a21 protein_coding retained_intron MGP_129S1SvImJ_T0006450.1 MGP_129S1SvImJ_G0005375.1 mouse_genomes_project 12 84272565 84273530 + Gm26623 lincRNA lincRNA MGP_129S1SvImJ_T0006488.1 MGP_129S1SvImJ_G0005408.1 mouse_genomes_project 12 111766232 111772467 + Meg3 lincRNA lincRNA MGP_129S1SvImJ_T0006489.1 MGP_129S1SvImJ_G0005408.1 mouse_genomes_project 12 111766236 111800322 + Meg3 lincRNA lincRNA MGP_129S1SvImJ_T0006490.1 MGP_129S1SvImJ_G0005408.1 mouse_genomes_project 12 111766238 111787790 + Meg3 lincRNA lincRNA MGP_129S1SvImJ_T0006491.1 MGP_129S1SvImJ_G0005408.1 mouse_genomes_project 12 111767254 111790283 + Meg3 lincRNA lincRNA MGP_129S1SvImJ_T0006492.1 MGP_129S1SvImJ_G0005408.1 mouse_genomes_project 12 111767499 111771517 + Meg3 lincRNA lincRNA MGP_129S1SvImJ_T0006494.1 MGP_129S1SvImJ_G0005408.1 mouse_genomes_project 12 111771707 111786921 + Meg3 lincRNA lincRNA MGP_129S1SvImJ_T0006495.1 MGP_129S1SvImJ_G0005408.1 mouse_genomes_project 12 111772607 111800327 + Meg3 lincRNA lincRNA MGP_129S1SvImJ_T0006496.1 MGP_129S1SvImJ_G0005408.1 mouse_genomes_project 12 111773600 111800320 + Meg3 lincRNA lincRNA MGP_129S1SvImJ_T0006497.1 MGP_129S1SvImJ_G0005408.1 mouse_genomes_project 12 111773654 111800323 + Meg3 lincRNA lincRNA MGP_129S1SvImJ_T0006498.1 MGP_129S1SvImJ_G0005408.1 mouse_genomes_project 12 111777761 111787404 + Meg3 lincRNA lincRNA MGP_129S1SvImJ_T0006499.1 MGP_129S1SvImJ_G0005408.1 mouse_genomes_project 12 111777859 111778380 + Meg3 lincRNA lincRNA MGP_129S1SvImJ_T0009797.1 MGP_129S1SvImJ_G0007913.1 mouse_genomes_project 12 28341980 28342084 - Gm25865 miRNA miRNA MGP_129S1SvImJ_T0102167.1 MGP_129S1SvImJ_G0040002.1 mouse_genomes_project 12 47653728 47656006 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0034870.1 MGP_129S1SvImJ_G0019760.1 mouse_genomes_project 12 56405056 56486801 + Mipol1 protein_coding retained_intron MGP_129S1SvImJ_T0034871.1 MGP_129S1SvImJ_G0019760.1 mouse_genomes_project 12 56405063 56536033 + Mipol1 protein_coding retained_intron MGP_129S1SvImJ_T0034872.1 MGP_129S1SvImJ_G0019760.1 mouse_genomes_project 12 56405065 56504357 + Mipol1 protein_coding retained_intron MGP_129S1SvImJ_T0034873.1 MGP_129S1SvImJ_G0019760.1 mouse_genomes_project 12 56405075 56687287 + MGP_129S1SvImJ_P0034873 Mipol1 protein_coding protein_coding MGP_129S1SvImJ_T0034874.1 MGP_129S1SvImJ_G0019760.1 mouse_genomes_project 12 56405075 56643662 + MGP_129S1SvImJ_P0034874 Mipol1 protein_coding protein_coding MGP_129S1SvImJ_T0034875.1 MGP_129S1SvImJ_G0019760.1 mouse_genomes_project 12 56405120 56550616 + Mipol1 protein_coding retained_intron MGP_129S1SvImJ_T0034876.1 MGP_129S1SvImJ_G0019760.1 mouse_genomes_project 12 56459401 56654554 + MGP_129S1SvImJ_P0034876 Mipol1 protein_coding protein_coding MGP_129S1SvImJ_T0034877.1 MGP_129S1SvImJ_G0019760.1 mouse_genomes_project 12 56474170 56686612 + MGP_129S1SvImJ_P0034877 Mipol1 protein_coding protein_coding MGP_129S1SvImJ_T0034878.1 MGP_129S1SvImJ_G0019760.1 mouse_genomes_project 12 56483741 56485335 + Mipol1 protein_coding retained_intron MGP_129S1SvImJ_T0034879.1 MGP_129S1SvImJ_G0019760.1 mouse_genomes_project 12 56512412 56550035 + Mipol1 protein_coding processed_transcript MGP_129S1SvImJ_T0009906.1 MGP_129S1SvImJ_G0008022.1 mouse_genomes_project 12 111992696 111992779 + Mir3072 miRNA miRNA MGP_129S1SvImJ_T0006480.1 MGP_129S1SvImJ_G0005401.1 mouse_genomes_project 12 109146627 109149523 + Gm16085 lincRNA lincRNA MGP_129S1SvImJ_T0012814.1 MGP_129S1SvImJ_G0010903.1 mouse_genomes_project 12 53639548 53641166 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012865.1 MGP_129S1SvImJ_G0010954.1 mouse_genomes_project 12 116413718 116414153 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0035897.1 MGP_129S1SvImJ_G0020097.1 mouse_genomes_project 12 107923882 107999213 + MGP_129S1SvImJ_P0035897 Vrk1 protein_coding protein_coding MGP_129S1SvImJ_T0035898.1 MGP_129S1SvImJ_G0020097.1 mouse_genomes_project 12 107924888 108001585 + MGP_129S1SvImJ_P0035898 Vrk1 protein_coding protein_coding MGP_129S1SvImJ_T0099310.1 MGP_129S1SvImJ_G0037377.1 mouse_genomes_project 12 51437934 51438041 + Gm24859 snRNA snRNA MGP_129S1SvImJ_T0000087.1 MGP_129S1SvImJ_G0000067.1 mouse_genomes_project 12 116973899 116974201 - MGP_129S1SvImJ_P0000087 Ighv13-2 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000088.1 MGP_129S1SvImJ_G0000067.1 mouse_genomes_project 12 116973899 116974359 - MGP_129S1SvImJ_P0000088 Ighv13-2 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000122.1 MGP_129S1SvImJ_G0000094.1 mouse_genomes_project 12 118781661 118782113 - MGP_129S1SvImJ_P0000122 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0006440.1 MGP_129S1SvImJ_G0005367.1 mouse_genomes_project 12 76514398 76515296 - 4930426I24Rik lincRNA lincRNA MGP_129S1SvImJ_T0035513.1 MGP_129S1SvImJ_G0019968.1 mouse_genomes_project 12 86895890 86985677 + MGP_129S1SvImJ_P0035513 Ift43 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035514.1 MGP_129S1SvImJ_G0019968.1 mouse_genomes_project 12 86895895 86985670 + MGP_129S1SvImJ_P0035514 Ift43 protein_coding protein_coding MGP_129S1SvImJ_T0035363.1 MGP_129S1SvImJ_G0019925.1 mouse_genomes_project 12 84733912 84741745 + MGP_129S1SvImJ_P0035363 protein_coding protein_coding MGP_129S1SvImJ_T0035364.1 MGP_129S1SvImJ_G0019925.1 mouse_genomes_project 12 84733919 84741745 + MGP_129S1SvImJ_P0035364 protein_coding protein_coding MGP_129S1SvImJ_T0034408.1 MGP_129S1SvImJ_G0019581.1 mouse_genomes_project 12 5002012 5042205 + MGP_129S1SvImJ_P0034408 Apob protein_coding protein_coding MGP_129S1SvImJ_T0034409.1 MGP_129S1SvImJ_G0019581.1 mouse_genomes_project 12 5002012 5012112 + MGP_129S1SvImJ_P0034409 Apob protein_coding protein_coding MGP_129S1SvImJ_T0034410.1 MGP_129S1SvImJ_G0019581.1 mouse_genomes_project 12 5002143 5041870 + MGP_129S1SvImJ_P0034410 Apob protein_coding protein_coding MGP_129S1SvImJ_T0034411.1 MGP_129S1SvImJ_G0019581.1 mouse_genomes_project 12 5037728 5042205 + MGP_129S1SvImJ_P0034411 Apob protein_coding protein_coding MGP_129S1SvImJ_T0012805.1 MGP_129S1SvImJ_G0010894.1 mouse_genomes_project 12 777596 778115 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009883.1 MGP_129S1SvImJ_G0007999.1 mouse_genomes_project 12 111967401 111967521 - Gm25252 miRNA miRNA MGP_129S1SvImJ_T0035863.1 MGP_129S1SvImJ_G0020088.1 mouse_genomes_project 12 107065852 107068279 + MGP_129S1SvImJ_P0035863 Tcl1b4 protein_coding protein_coding MGP_129S1SvImJ_T0034449.1 MGP_129S1SvImJ_G0019594.1 mouse_genomes_project 12 7533638 7562120 + MGP_129S1SvImJ_P0034449 Nt5c1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034450.1 MGP_129S1SvImJ_G0019594.1 mouse_genomes_project 12 7533644 7562123 + MGP_129S1SvImJ_P0034450 Nt5c1b protein_coding protein_coding MGP_129S1SvImJ_T0034451.1 MGP_129S1SvImJ_G0019594.1 mouse_genomes_project 12 7533644 7539483 + MGP_129S1SvImJ_P0034451 Nt5c1b protein_coding protein_coding MGP_129S1SvImJ_T0034452.1 MGP_129S1SvImJ_G0019594.1 mouse_genomes_project 12 7533709 7562120 + MGP_129S1SvImJ_P0034452 Nt5c1b protein_coding protein_coding MGP_129S1SvImJ_T0006477.1 MGP_129S1SvImJ_G0005398.1 mouse_genomes_project 12 108836610 108880835 + 1700013N06Rik lincRNA lincRNA MGP_129S1SvImJ_T0034608.1 MGP_129S1SvImJ_G0019654.1 mouse_genomes_project 12 28811889 28834004 - MGP_129S1SvImJ_P0034608 Acp1 protein_coding protein_coding MGP_129S1SvImJ_T0034609.1 MGP_129S1SvImJ_G0019654.1 mouse_genomes_project 12 28811889 28834004 - MGP_129S1SvImJ_P0034609 Acp1 protein_coding protein_coding MGP_129S1SvImJ_T0012830.1 MGP_129S1SvImJ_G0010919.1 mouse_genomes_project 12 75663593 75663925 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000106.1 MGP_129S1SvImJ_G0000081.1 mouse_genomes_project 12 117734401 117734695 - MGP_129S1SvImJ_P0000106 Ighv1-47 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000107.1 MGP_129S1SvImJ_G0000081.1 mouse_genomes_project 12 117734401 117734874 - MGP_129S1SvImJ_P0000107 Ighv1-47 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000060.1 MGP_129S1SvImJ_G0000048.1 mouse_genomes_project 12 116415195 116415674 - MGP_129S1SvImJ_P0000060 Ighv5-15 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000061.1 MGP_129S1SvImJ_G0000048.1 mouse_genomes_project 12 116415195 116415666 - MGP_129S1SvImJ_P0000061 Ighv5-15 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0012841.1 MGP_129S1SvImJ_G0010930.1 mouse_genomes_project 12 87954150 87954265 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034713.1 MGP_129S1SvImJ_G0019694.1 mouse_genomes_project 12 34616531 34922738 + MGP_129S1SvImJ_P0034713 Ispd protein_coding protein_coding MGP_129S1SvImJ_T0009920.1 MGP_129S1SvImJ_G0008036.1 mouse_genomes_project 12 119012706 119012827 - Gm44372 miRNA miRNA MGP_129S1SvImJ_T0035630.1 MGP_129S1SvImJ_G0020001.1 mouse_genomes_project 12 92938945 92982252 - MGP_129S1SvImJ_P0035630 Sel1l protein_coding protein_coding MGP_129S1SvImJ_T0035631.1 MGP_129S1SvImJ_G0020001.1 mouse_genomes_project 12 92938945 92982252 - MGP_129S1SvImJ_P0035631 Sel1l protein_coding protein_coding MGP_129S1SvImJ_T0035632.1 MGP_129S1SvImJ_G0020001.1 mouse_genomes_project 12 92938967 92947060 - Sel1l protein_coding processed_transcript MGP_129S1SvImJ_T0035633.1 MGP_129S1SvImJ_G0020001.1 mouse_genomes_project 12 92939521 92982224 - MGP_129S1SvImJ_P0035633 Sel1l protein_coding protein_coding MGP_129S1SvImJ_T0035634.1 MGP_129S1SvImJ_G0020001.1 mouse_genomes_project 12 92941543 92982225 - Sel1l protein_coding retained_intron MGP_129S1SvImJ_T0035635.1 MGP_129S1SvImJ_G0020001.1 mouse_genomes_project 12 92948618 92951364 - Sel1l protein_coding retained_intron MGP_129S1SvImJ_T0035636.1 MGP_129S1SvImJ_G0020001.1 mouse_genomes_project 12 92953094 92982225 - Sel1l protein_coding retained_intron MGP_129S1SvImJ_T0035637.1 MGP_129S1SvImJ_G0020001.1 mouse_genomes_project 12 92958019 92965060 - Sel1l protein_coding retained_intron MGP_129S1SvImJ_T0035638.1 MGP_129S1SvImJ_G0020001.1 mouse_genomes_project 12 92965300 92982234 - Sel1l protein_coding retained_intron MGP_129S1SvImJ_T0035639.1 MGP_129S1SvImJ_G0020001.1 mouse_genomes_project 12 92974592 92982235 - Sel1l protein_coding retained_intron MGP_129S1SvImJ_T0035228.1 MGP_129S1SvImJ_G0019890.1 mouse_genomes_project 12 81015048 81025676 - MGP_129S1SvImJ_P0035228 protein_coding protein_coding MGP_129S1SvImJ_T0034741.1 MGP_129S1SvImJ_G0019700.1 mouse_genomes_project 12 38465371 38542759 - MGP_129S1SvImJ_P0034741 Scin protein_coding protein_coding MGP_129S1SvImJ_T0034742.1 MGP_129S1SvImJ_G0019700.1 mouse_genomes_project 12 38465375 38542804 - MGP_129S1SvImJ_P0034742 Scin protein_coding protein_coding MGP_129S1SvImJ_T0036061.1 MGP_129S1SvImJ_G0020147.1 mouse_genomes_project 12 114415726 114417933 - MGP_129S1SvImJ_P0036061 Rd3l protein_coding protein_coding MGP_129S1SvImJ_T0036062.1 MGP_129S1SvImJ_G0020147.1 mouse_genomes_project 12 114415727 114416759 - MGP_129S1SvImJ_P0036062 Rd3l protein_coding protein_coding MGP_129S1SvImJ_T0036063.1 MGP_129S1SvImJ_G0020147.1 mouse_genomes_project 12 114415760 114417670 - MGP_129S1SvImJ_P0036063 Rd3l protein_coding protein_coding MGP_129S1SvImJ_T0036064.1 MGP_129S1SvImJ_G0020147.1 mouse_genomes_project 12 114415804 114417085 - MGP_129S1SvImJ_P0036064 Rd3l protein_coding protein_coding MGP_129S1SvImJ_T0036065.1 MGP_129S1SvImJ_G0020147.1 mouse_genomes_project 12 114415806 114417718 - MGP_129S1SvImJ_P0036065 Rd3l protein_coding protein_coding MGP_129S1SvImJ_T0036178.1 MGP_129S1SvImJ_G0020190.1 mouse_genomes_project 12 122163787 122251302 - MGP_129S1SvImJ_P0036178 Itgb8 protein_coding protein_coding MGP_129S1SvImJ_T0036179.1 MGP_129S1SvImJ_G0020190.1 mouse_genomes_project 12 122197753 122251301 - Itgb8 protein_coding retained_intron MGP_129S1SvImJ_T0036180.1 MGP_129S1SvImJ_G0020190.1 mouse_genomes_project 12 122210988 122251270 - Itgb8 protein_coding retained_intron MGP_129S1SvImJ_T0009839.1 MGP_129S1SvImJ_G0007955.1 mouse_genomes_project 12 110995054 110995150 + Mir345 miRNA miRNA MGP_129S1SvImJ_T0034723.1 MGP_129S1SvImJ_G0019698.1 mouse_genomes_project 12 37103157 37196397 + MGP_129S1SvImJ_P0034723 Etv1 protein_coding protein_coding MGP_129S1SvImJ_T0034724.1 MGP_129S1SvImJ_G0019698.1 mouse_genomes_project 12 37103859 37198363 + MGP_129S1SvImJ_P0034724 Etv1 protein_coding protein_coding MGP_129S1SvImJ_T0034725.1 MGP_129S1SvImJ_G0019698.1 mouse_genomes_project 12 37104061 37195927 + MGP_129S1SvImJ_P0034725 Etv1 protein_coding protein_coding MGP_129S1SvImJ_T0034726.1 MGP_129S1SvImJ_G0019698.1 mouse_genomes_project 12 37104096 37105591 + MGP_129S1SvImJ_P0034726 Etv1 protein_coding protein_coding MGP_129S1SvImJ_T0034727.1 MGP_129S1SvImJ_G0019698.1 mouse_genomes_project 12 37104126 37162095 + MGP_129S1SvImJ_P0034727 Etv1 protein_coding protein_coding MGP_129S1SvImJ_T0034728.1 MGP_129S1SvImJ_G0019698.1 mouse_genomes_project 12 37104625 37195924 + MGP_129S1SvImJ_P0034728 Etv1 protein_coding protein_coding MGP_129S1SvImJ_T0034729.1 MGP_129S1SvImJ_G0019698.1 mouse_genomes_project 12 37104890 37197447 + Etv1 protein_coding retained_intron MGP_129S1SvImJ_T0034730.1 MGP_129S1SvImJ_G0019698.1 mouse_genomes_project 12 37104906 37162007 + MGP_129S1SvImJ_P0034730 Etv1 protein_coding protein_coding MGP_129S1SvImJ_T0034731.1 MGP_129S1SvImJ_G0019698.1 mouse_genomes_project 12 37107247 37196324 + MGP_129S1SvImJ_P0034731 Etv1 protein_coding protein_coding MGP_129S1SvImJ_T0034732.1 MGP_129S1SvImJ_G0019698.1 mouse_genomes_project 12 37107258 37196109 + MGP_129S1SvImJ_P0034732 Etv1 protein_coding protein_coding MGP_129S1SvImJ_T0034733.1 MGP_129S1SvImJ_G0019698.1 mouse_genomes_project 12 37107286 37198351 + MGP_129S1SvImJ_P0034733 Etv1 protein_coding protein_coding MGP_129S1SvImJ_T0034734.1 MGP_129S1SvImJ_G0019698.1 mouse_genomes_project 12 37151481 37158053 + MGP_129S1SvImJ_P0034734 Etv1 protein_coding protein_coding MGP_129S1SvImJ_T0034735.1 MGP_129S1SvImJ_G0019698.1 mouse_genomes_project 12 37164234 37195864 + Etv1 protein_coding processed_transcript MGP_129S1SvImJ_T0100563.1 MGP_129S1SvImJ_G0038630.1 mouse_genomes_project 12 39827335 39827467 - Gm25497 snoRNA snoRNA MGP_129S1SvImJ_T0099337.1 MGP_129S1SvImJ_G0037404.1 mouse_genomes_project 12 96647029 96647136 - Gm26055 snRNA snRNA MGP_129S1SvImJ_T0000892.1 MGP_129S1SvImJ_G0000825.1 mouse_genomes_project 12 104226002 104228134 - TEC TEC MGP_129S1SvImJ_T0034439.1 MGP_129S1SvImJ_G0019590.1 mouse_genomes_project 12 6033962 6060173 + MGP_129S1SvImJ_P0034439 Matn3 protein_coding protein_coding MGP_129S1SvImJ_T0034789.1 MGP_129S1SvImJ_G0019719.1 mouse_genomes_project 12 48125808 48126369 + MGP_129S1SvImJ_P0034789 Gm9804 protein_coding protein_coding MGP_129S1SvImJ_T0009848.1 MGP_129S1SvImJ_G0007964.1 mouse_genomes_project 12 111814906 111815000 + Mir665 miRNA miRNA MGP_129S1SvImJ_T0000091.1 MGP_129S1SvImJ_G0000070.1 mouse_genomes_project 12 117101328 117101786 - MGP_129S1SvImJ_P0000091 Ighv6-7 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0035420.1 MGP_129S1SvImJ_G0019940.1 mouse_genomes_project 12 85291733 85317422 + MGP_129S1SvImJ_P0035420 Vsx2 protein_coding protein_coding MGP_129S1SvImJ_T0035421.1 MGP_129S1SvImJ_G0019940.1 mouse_genomes_project 12 85291811 85317422 + MGP_129S1SvImJ_P0035421 Vsx2 protein_coding protein_coding MGP_129S1SvImJ_T0000026.1 MGP_129S1SvImJ_G0000020.1 mouse_genomes_project 12 116079867 116079884 - MGP_129S1SvImJ_P0000026 IG_D_gene IG_D_gene MGP_129S1SvImJ_T0035203.1 MGP_129S1SvImJ_G0019877.1 mouse_genomes_project 12 79314293 79367094 + MGP_129S1SvImJ_P0035203 Plekhh1 protein_coding protein_coding MGP_129S1SvImJ_T0003405.1 MGP_129S1SvImJ_G0003127.1 mouse_genomes_project 12 582469 593097 - Dtnbos antisense antisense MGP_129S1SvImJ_T0100613.1 MGP_129S1SvImJ_G0038680.1 mouse_genomes_project 12 111928133 111928205 + Gm25854 snoRNA snoRNA MGP_129S1SvImJ_T0009899.1 MGP_129S1SvImJ_G0008015.1 mouse_genomes_project 12 111984147 111984215 + Mir377 miRNA miRNA MGP_129S1SvImJ_T0034940.1 MGP_129S1SvImJ_G0019781.1 mouse_genomes_project 12 64616128 64656191 - Mis18bp1 protein_coding retained_intron MGP_129S1SvImJ_T0034941.1 MGP_129S1SvImJ_G0019781.1 mouse_genomes_project 12 64616128 64656167 - MGP_129S1SvImJ_P0034941 Mis18bp1 protein_coding protein_coding MGP_129S1SvImJ_T0034942.1 MGP_129S1SvImJ_G0019781.1 mouse_genomes_project 12 64619718 64622142 - Mis18bp1 protein_coding retained_intron MGP_129S1SvImJ_T0034943.1 MGP_129S1SvImJ_G0019781.1 mouse_genomes_project 12 64636372 64638689 - Mis18bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0034944.1 MGP_129S1SvImJ_G0019781.1 mouse_genomes_project 12 64638312 64656153 - Mis18bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0034945.1 MGP_129S1SvImJ_G0019781.1 mouse_genomes_project 12 64639614 64656165 - Mis18bp1 protein_coding retained_intron MGP_129S1SvImJ_T0000878.1 MGP_129S1SvImJ_G0000811.1 mouse_genomes_project 12 8409490 8410240 - TEC TEC MGP_129S1SvImJ_T0035910.1 MGP_129S1SvImJ_G0020101.1 mouse_genomes_project 12 110261612 110287734 + MGP_129S1SvImJ_P0035910 Ccnk protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035911.1 MGP_129S1SvImJ_G0020101.1 mouse_genomes_project 12 110261839 110287730 + MGP_129S1SvImJ_P0035911 Ccnk protein_coding protein_coding MGP_129S1SvImJ_T0035558.1 MGP_129S1SvImJ_G0019983.1 mouse_genomes_project 12 88138888 88165930 - MGP_129S1SvImJ_P0035558 Vipas39 protein_coding protein_coding MGP_129S1SvImJ_T0035559.1 MGP_129S1SvImJ_G0019983.1 mouse_genomes_project 12 88138888 88163888 - MGP_129S1SvImJ_P0035559 Vipas39 protein_coding protein_coding MGP_129S1SvImJ_T0035560.1 MGP_129S1SvImJ_G0019983.1 mouse_genomes_project 12 88138888 88165930 - MGP_129S1SvImJ_P0035560 Vipas39 protein_coding protein_coding MGP_129S1SvImJ_T0009838.1 MGP_129S1SvImJ_G0007954.1 mouse_genomes_project 12 110863124 110863201 - Gm23872 miRNA miRNA MGP_129S1SvImJ_T0000100.1 MGP_129S1SvImJ_G0000077.1 mouse_genomes_project 12 117321429 117321862 - MGP_129S1SvImJ_P0000100 Ighv1-11 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0006455.1 MGP_129S1SvImJ_G0005380.1 mouse_genomes_project 12 87767676 87768837 - Gm26698 lincRNA lincRNA MGP_129S1SvImJ_T0034606.1 MGP_129S1SvImJ_G0019652.1 mouse_genomes_project 12 28492720 28499116 + MGP_129S1SvImJ_P0034606 Tmem18 protein_coding protein_coding MGP_129S1SvImJ_T0035002.1 MGP_129S1SvImJ_G0019805.1 mouse_genomes_project 12 69690709 69713631 - MGP_129S1SvImJ_P0035002 Sav1 protein_coding protein_coding MGP_129S1SvImJ_T0035832.1 MGP_129S1SvImJ_G0020067.1 mouse_genomes_project 12 105870190 105879363 + MGP_129S1SvImJ_P0035832 Serpina3a protein_coding protein_coding MGP_129S1SvImJ_T0035833.1 MGP_129S1SvImJ_G0020067.1 mouse_genomes_project 12 105870246 105879275 + MGP_129S1SvImJ_P0035833 Serpina3a protein_coding protein_coding MGP_129S1SvImJ_T0035834.1 MGP_129S1SvImJ_G0020067.1 mouse_genomes_project 12 105873436 105878985 + MGP_129S1SvImJ_P0035834 Serpina3a protein_coding protein_coding MGP_129S1SvImJ_T0034564.1 MGP_129S1SvImJ_G0019635.1 mouse_genomes_project 12 22795260 22797554 - MGP_129S1SvImJ_P0034564 Id2 protein_coding protein_coding MGP_129S1SvImJ_T0035189.1 MGP_129S1SvImJ_G0019868.1 mouse_genomes_project 12 77435203 77689379 + MGP_129S1SvImJ_P0035189 Fut8 protein_coding protein_coding MGP_129S1SvImJ_T0035190.1 MGP_129S1SvImJ_G0019868.1 mouse_genomes_project 12 77435203 77689379 + MGP_129S1SvImJ_P0035190 Fut8 protein_coding protein_coding MGP_129S1SvImJ_T0035191.1 MGP_129S1SvImJ_G0019868.1 mouse_genomes_project 12 77436164 77689721 + MGP_129S1SvImJ_P0035191 Fut8 protein_coding protein_coding MGP_129S1SvImJ_T0035320.1 MGP_129S1SvImJ_G0019913.1 mouse_genomes_project 12 84158318 84182640 + MGP_129S1SvImJ_P0035320 Dcaf4 protein_coding protein_coding MGP_129S1SvImJ_T0035394.1 MGP_129S1SvImJ_G0019934.1 mouse_genomes_project 12 85065297 85077428 + MGP_129S1SvImJ_P0035394 Coq6 protein_coding protein_coding MGP_129S1SvImJ_T0035395.1 MGP_129S1SvImJ_G0019934.1 mouse_genomes_project 12 85065608 85077432 + MGP_129S1SvImJ_P0035395 Coq6 protein_coding protein_coding MGP_129S1SvImJ_T0035396.1 MGP_129S1SvImJ_G0019934.1 mouse_genomes_project 12 85065636 85077432 + Coq6 protein_coding retained_intron MGP_129S1SvImJ_T0035397.1 MGP_129S1SvImJ_G0019934.1 mouse_genomes_project 12 85065670 85077428 + MGP_129S1SvImJ_P0035397 Coq6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035398.1 MGP_129S1SvImJ_G0019934.1 mouse_genomes_project 12 85065679 85077428 + MGP_129S1SvImJ_P0035398 Coq6 protein_coding protein_coding MGP_129S1SvImJ_T0035399.1 MGP_129S1SvImJ_G0019934.1 mouse_genomes_project 12 85065681 85070740 + Coq6 protein_coding processed_transcript MGP_129S1SvImJ_T0035400.1 MGP_129S1SvImJ_G0019934.1 mouse_genomes_project 12 85065683 85077424 + Coq6 protein_coding retained_intron MGP_129S1SvImJ_T0035401.1 MGP_129S1SvImJ_G0019934.1 mouse_genomes_project 12 85065704 85074667 + MGP_129S1SvImJ_P0035401 Coq6 protein_coding protein_coding MGP_129S1SvImJ_T0035402.1 MGP_129S1SvImJ_G0019934.1 mouse_genomes_project 12 85072061 85075879 + Coq6 protein_coding processed_transcript MGP_129S1SvImJ_T0035403.1 MGP_129S1SvImJ_G0019934.1 mouse_genomes_project 12 85072061 85077428 + Coq6 protein_coding processed_transcript MGP_129S1SvImJ_T0035404.1 MGP_129S1SvImJ_G0019934.1 mouse_genomes_project 12 85074637 85075801 + Coq6 protein_coding retained_intron MGP_129S1SvImJ_T0100595.1 MGP_129S1SvImJ_G0038662.1 mouse_genomes_project 12 111870058 111870131 + AF357425 snoRNA snoRNA MGP_129S1SvImJ_T0011349.1 MGP_129S1SvImJ_G0009465.1 mouse_genomes_project 12 69656085 69656395 + Gm22058 misc_RNA misc_RNA MGP_129S1SvImJ_T0000291.1 MGP_129S1SvImJ_G0000233.1 mouse_genomes_project 12 118727635 118727900 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0034987.1 MGP_129S1SvImJ_G0019799.1 mouse_genomes_project 12 69398236 69432652 - MGP_129S1SvImJ_P0034987 L2hgdh protein_coding protein_coding MGP_129S1SvImJ_T0009908.1 MGP_129S1SvImJ_G0008024.1 mouse_genomes_project 12 112992143 112992246 + Gm27299 miRNA miRNA MGP_129S1SvImJ_T0011362.1 MGP_129S1SvImJ_G0009478.1 mouse_genomes_project 12 121746956 121747155 + Gm22537 misc_RNA misc_RNA MGP_129S1SvImJ_T0100594.1 MGP_129S1SvImJ_G0038661.1 mouse_genomes_project 12 111867814 111867889 + Gm23474 snoRNA snoRNA MGP_129S1SvImJ_T0003418.1 MGP_129S1SvImJ_G0003138.1 mouse_genomes_project 12 56627619 56636539 - Gm16246 antisense antisense MGP_129S1SvImJ_T0035676.1 MGP_129S1SvImJ_G0020013.1 mouse_genomes_project 12 101336863 101390630 + Tdp1 protein_coding retained_intron MGP_129S1SvImJ_T0035677.1 MGP_129S1SvImJ_G0020013.1 mouse_genomes_project 12 101336877 101340132 + Tdp1 protein_coding processed_transcript MGP_129S1SvImJ_T0035678.1 MGP_129S1SvImJ_G0020013.1 mouse_genomes_project 12 101336880 101408330 + MGP_129S1SvImJ_P0035678 Tdp1 protein_coding protein_coding MGP_129S1SvImJ_T0035679.1 MGP_129S1SvImJ_G0020013.1 mouse_genomes_project 12 101338830 101343562 + MGP_129S1SvImJ_P0035679 Tdp1 protein_coding protein_coding MGP_129S1SvImJ_T0035680.1 MGP_129S1SvImJ_G0020013.1 mouse_genomes_project 12 101343396 101408325 + MGP_129S1SvImJ_P0035680 Tdp1 protein_coding protein_coding MGP_129S1SvImJ_T0035681.1 MGP_129S1SvImJ_G0020013.1 mouse_genomes_project 12 101363880 101364812 + Tdp1 protein_coding retained_intron MGP_129S1SvImJ_T0035682.1 MGP_129S1SvImJ_G0020013.1 mouse_genomes_project 12 101366238 101408330 + Tdp1 protein_coding retained_intron MGP_129S1SvImJ_T0035871.1 MGP_129S1SvImJ_G0020091.1 mouse_genomes_project 12 107443554 107474166 + MGP_129S1SvImJ_P0035871 Bdkrb2 protein_coding protein_coding MGP_129S1SvImJ_T0100565.1 MGP_129S1SvImJ_G0038632.1 mouse_genomes_project 12 43721835 43721966 + Gm24731 snoRNA snoRNA MGP_129S1SvImJ_T0036110.1 MGP_129S1SvImJ_G0020168.1 mouse_genomes_project 12 115481774 115485402 + MGP_129S1SvImJ_P0036110 9230104M06Rik protein_coding protein_coding MGP_129S1SvImJ_T0035261.1 MGP_129S1SvImJ_G0019901.1 mouse_genomes_project 12 81835542 81839871 - MGP_129S1SvImJ_P0035261 Gm4787 protein_coding protein_coding MGP_129S1SvImJ_T0034405.1 MGP_129S1SvImJ_G0019579.1 mouse_genomes_project 12 1841028 1975535 + MGP_129S1SvImJ_P0034405 Atad2b protein_coding protein_coding MGP_129S1SvImJ_T0034406.1 MGP_129S1SvImJ_G0019579.1 mouse_genomes_project 12 1841333 1978890 + MGP_129S1SvImJ_P0034406 Atad2b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035204.1 MGP_129S1SvImJ_G0019878.1 mouse_genomes_project 12 79366118 79375101 - MGP_129S1SvImJ_P0035204 Pigh protein_coding protein_coding MGP_129S1SvImJ_T0036174.1 MGP_129S1SvImJ_G0020188.1 mouse_genomes_project 12 121844613 121850853 + MGP_129S1SvImJ_P0036174 Sp8 protein_coding protein_coding MGP_129S1SvImJ_T0003421.1 MGP_129S1SvImJ_G0003141.1 mouse_genomes_project 12 69503553 69507775 + 4930512B01Rik antisense antisense MGP_129S1SvImJ_T0003422.1 MGP_129S1SvImJ_G0003141.1 mouse_genomes_project 12 69503600 69554758 + 4930512B01Rik antisense antisense MGP_129S1SvImJ_T0035549.1 MGP_129S1SvImJ_G0019978.1 mouse_genomes_project 12 87998576 88043238 - MGP_129S1SvImJ_P0035549 Pomt2 protein_coding protein_coding MGP_129S1SvImJ_T0034754.1 MGP_129S1SvImJ_G0019703.1 mouse_genomes_project 12 38635151 38637633 + MGP_129S1SvImJ_P0034754 Gm7008 protein_coding protein_coding MGP_129S1SvImJ_T0034755.1 MGP_129S1SvImJ_G0019703.1 mouse_genomes_project 12 38635757 38641575 + MGP_129S1SvImJ_P0034755 Gm7008 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034756.1 MGP_129S1SvImJ_G0019703.1 mouse_genomes_project 12 38635822 38641560 + MGP_129S1SvImJ_P0034756 Gm7008 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0006479.1 MGP_129S1SvImJ_G0005400.1 mouse_genomes_project 12 109093319 109114598 - Gm16086 lincRNA lincRNA MGP_129S1SvImJ_T0009808.1 MGP_129S1SvImJ_G0007924.1 mouse_genomes_project 12 58442353 58442423 - Gm27284 miRNA miRNA MGP_129S1SvImJ_T0035731.1 MGP_129S1SvImJ_G0020028.1 mouse_genomes_project 12 103582535 103616647 + MGP_129S1SvImJ_P0035731 Cpsf2 protein_coding protein_coding MGP_129S1SvImJ_T0034757.1 MGP_129S1SvImJ_G0019704.1 mouse_genomes_project 12 38735601 38862836 - MGP_129S1SvImJ_P0034757 Zfp277 protein_coding protein_coding MGP_129S1SvImJ_T0034758.1 MGP_129S1SvImJ_G0019704.1 mouse_genomes_project 12 38736113 38862815 - MGP_129S1SvImJ_P0034758 Zfp277 protein_coding protein_coding MGP_129S1SvImJ_T0034884.1 MGP_129S1SvImJ_G0019763.1 mouse_genomes_project 12 57399082 57401198 + MGP_129S1SvImJ_P0034884 Sstr1 protein_coding protein_coding MGP_129S1SvImJ_T0034885.1 MGP_129S1SvImJ_G0019763.1 mouse_genomes_project 12 57399114 57401751 + MGP_129S1SvImJ_P0034885 Sstr1 protein_coding protein_coding MGP_129S1SvImJ_T0100574.1 MGP_129S1SvImJ_G0038641.1 mouse_genomes_project 12 64189263 64189394 + Gm24066 snoRNA snoRNA MGP_129S1SvImJ_T0034819.1 MGP_129S1SvImJ_G0019737.1 mouse_genomes_project 12 53604240 53633003 - MGP_129S1SvImJ_P0034819 Eapp protein_coding protein_coding MGP_129S1SvImJ_T0034820.1 MGP_129S1SvImJ_G0019737.1 mouse_genomes_project 12 53604357 53632966 - MGP_129S1SvImJ_P0034820 Eapp protein_coding protein_coding MGP_129S1SvImJ_T0034821.1 MGP_129S1SvImJ_G0019737.1 mouse_genomes_project 12 53618853 53633025 - MGP_129S1SvImJ_P0034821 Eapp protein_coding protein_coding MGP_129S1SvImJ_T0034822.1 MGP_129S1SvImJ_G0019737.1 mouse_genomes_project 12 53623030 53633044 - MGP_129S1SvImJ_P0034822 Eapp protein_coding protein_coding MGP_129S1SvImJ_T0003434.1 MGP_129S1SvImJ_G0003152.1 mouse_genomes_project 12 85666417 85667508 + Gm17139 antisense antisense MGP_129S1SvImJ_T0000027.1 MGP_129S1SvImJ_G0000021.1 mouse_genomes_project 12 116082560 116082583 - MGP_129S1SvImJ_P0000027 Gm16968 IG_D_gene IG_D_gene MGP_129S1SvImJ_T0012872.1 MGP_129S1SvImJ_G0010961.1 mouse_genomes_project 12 119455287 119455580 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006493.1 MGP_129S1SvImJ_G0005409.1 mouse_genomes_project 12 111770991 111771833 + Gm27000 lincRNA lincRNA MGP_129S1SvImJ_T0012847.1 MGP_129S1SvImJ_G0010936.1 mouse_genomes_project 12 102347924 102348381 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034464.1 MGP_129S1SvImJ_G0019604.1 mouse_genomes_project 12 10167294 10173113 - MGP_129S1SvImJ_P0034464 Mycn protein_coding protein_coding MGP_129S1SvImJ_T0034465.1 MGP_129S1SvImJ_G0019604.1 mouse_genomes_project 12 10167294 10171815 - MGP_129S1SvImJ_P0034465 Mycn protein_coding protein_coding MGP_129S1SvImJ_T0034466.1 MGP_129S1SvImJ_G0019604.1 mouse_genomes_project 12 10172142 10173024 - Mycn protein_coding processed_transcript MGP_129S1SvImJ_T0034975.1 MGP_129S1SvImJ_G0019794.1 mouse_genomes_project 12 68991050 69045121 - MGP_129S1SvImJ_P0034975 Nemf protein_coding protein_coding MGP_129S1SvImJ_T0035529.1 MGP_129S1SvImJ_G0019973.1 mouse_genomes_project 12 87596167 87626250 + MGP_129S1SvImJ_P0035529 Lrrc74a protein_coding protein_coding MGP_129S1SvImJ_T0034458.1 MGP_129S1SvImJ_G0019599.1 mouse_genomes_project 12 8457640 8515008 + MGP_129S1SvImJ_P0034458 Smc6 protein_coding protein_coding MGP_129S1SvImJ_T0035205.1 MGP_129S1SvImJ_G0019879.1 mouse_genomes_project 12 79408962 79436642 + MGP_129S1SvImJ_P0035205 Arg2 protein_coding protein_coding MGP_129S1SvImJ_T0035342.1 MGP_129S1SvImJ_G0019917.1 mouse_genomes_project 12 84417418 84446140 + MGP_129S1SvImJ_P0035342 Papln protein_coding protein_coding MGP_129S1SvImJ_T0035343.1 MGP_129S1SvImJ_G0019917.1 mouse_genomes_project 12 84417438 84446113 + MGP_129S1SvImJ_P0035343 Papln protein_coding protein_coding MGP_129S1SvImJ_T0035344.1 MGP_129S1SvImJ_G0019917.1 mouse_genomes_project 12 84417446 84434890 + Papln protein_coding retained_intron MGP_129S1SvImJ_T0099312.1 MGP_129S1SvImJ_G0037379.1 mouse_genomes_project 12 53137702 53137851 + Gm22220 snRNA snRNA MGP_129S1SvImJ_T0012868.1 MGP_129S1SvImJ_G0010957.1 mouse_genomes_project 12 118852361 118853701 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006515.1 MGP_129S1SvImJ_G0005414.1 mouse_genomes_project 12 113178790 113181566 + 4921507G05Rik lincRNA lincRNA MGP_129S1SvImJ_T0035077.1 MGP_129S1SvImJ_G0019829.1 mouse_genomes_project 12 72608282 72650400 + MGP_129S1SvImJ_P0035077 Ppm1a protein_coding protein_coding MGP_129S1SvImJ_T0035281.1 MGP_129S1SvImJ_G0019905.1 mouse_genomes_project 12 82046644 82047695 - Med6 protein_coding retained_intron MGP_129S1SvImJ_T0035282.1 MGP_129S1SvImJ_G0019905.1 mouse_genomes_project 12 82046778 82072421 - MGP_129S1SvImJ_P0035282 Med6 protein_coding protein_coding MGP_129S1SvImJ_T0035283.1 MGP_129S1SvImJ_G0019905.1 mouse_genomes_project 12 82059583 82072415 - Med6 protein_coding retained_intron MGP_129S1SvImJ_T0098478.1 MGP_129S1SvImJ_G0036563.1 mouse_genomes_project 12 98717098 98717178 - Gm23558 rRNA rRNA MGP_129S1SvImJ_T0009807.1 MGP_129S1SvImJ_G0007923.1 mouse_genomes_project 12 54895384 54895475 - Gm23394 miRNA miRNA MGP_129S1SvImJ_T0012821.1 MGP_129S1SvImJ_G0010910.1 mouse_genomes_project 12 58495395 58496370 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036001.1 MGP_129S1SvImJ_G0020128.1 mouse_genomes_project 12 113532507 113609712 + MGP_129S1SvImJ_P0036001 Traf3 protein_coding protein_coding MGP_129S1SvImJ_T0036002.1 MGP_129S1SvImJ_G0020128.1 mouse_genomes_project 12 113590445 113638835 + MGP_129S1SvImJ_P0036002 Traf3 protein_coding protein_coding MGP_129S1SvImJ_T0036003.1 MGP_129S1SvImJ_G0020128.1 mouse_genomes_project 12 113590445 113638831 + MGP_129S1SvImJ_P0036003 Traf3 protein_coding protein_coding MGP_129S1SvImJ_T0036004.1 MGP_129S1SvImJ_G0020128.1 mouse_genomes_project 12 113608196 113638840 + MGP_129S1SvImJ_P0036004 Traf3 protein_coding protein_coding MGP_129S1SvImJ_T0036005.1 MGP_129S1SvImJ_G0020128.1 mouse_genomes_project 12 113620444 113634247 + Traf3 protein_coding retained_intron MGP_129S1SvImJ_T0006406.1 MGP_129S1SvImJ_G0005340.1 mouse_genomes_project 12 4380572 4388852 - 1700101O22Rik lincRNA lincRNA MGP_129S1SvImJ_T0012832.1 MGP_129S1SvImJ_G0010921.1 mouse_genomes_project 12 79443744 79444172 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034580.1 MGP_129S1SvImJ_G0019644.1 mouse_genomes_project 12 26487426 26497325 + MGP_129S1SvImJ_P0034580 Rnaseh1 protein_coding protein_coding MGP_129S1SvImJ_T0098480.1 MGP_129S1SvImJ_G0036565.1 mouse_genomes_project 12 107525832 107525961 + Gm22790 rRNA rRNA MGP_129S1SvImJ_T0009919.1 MGP_129S1SvImJ_G0008035.1 mouse_genomes_project 12 117115716 117115776 - Mir7094-2 miRNA miRNA MGP_129S1SvImJ_T0100610.1 MGP_129S1SvImJ_G0038677.1 mouse_genomes_project 12 111922661 111922736 + Gm22981 snoRNA snoRNA MGP_129S1SvImJ_T0036057.1 MGP_129S1SvImJ_G0020144.1 mouse_genomes_project 12 114248807 114333493 - MGP_129S1SvImJ_P0036057 Ppp1r13b protein_coding protein_coding MGP_129S1SvImJ_T0036058.1 MGP_129S1SvImJ_G0020144.1 mouse_genomes_project 12 114290034 114333478 - MGP_129S1SvImJ_P0036058 Ppp1r13b protein_coding protein_coding MGP_129S1SvImJ_T0035697.1 MGP_129S1SvImJ_G0020020.1 mouse_genomes_project 12 102263800 102359669 + MGP_129S1SvImJ_P0035697 9030617O03Rik protein_coding protein_coding MGP_129S1SvImJ_T0035698.1 MGP_129S1SvImJ_G0020020.1 mouse_genomes_project 12 102263821 102359413 + MGP_129S1SvImJ_P0035698 9030617O03Rik protein_coding protein_coding MGP_129S1SvImJ_T0035699.1 MGP_129S1SvImJ_G0020020.1 mouse_genomes_project 12 102263829 102384095 + MGP_129S1SvImJ_P0035699 9030617O03Rik protein_coding protein_coding MGP_129S1SvImJ_T0035700.1 MGP_129S1SvImJ_G0020020.1 mouse_genomes_project 12 102263838 102359413 + MGP_129S1SvImJ_P0035700 9030617O03Rik protein_coding protein_coding MGP_129S1SvImJ_T0035701.1 MGP_129S1SvImJ_G0020020.1 mouse_genomes_project 12 102263879 102324458 + MGP_129S1SvImJ_P0035701 9030617O03Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035702.1 MGP_129S1SvImJ_G0020020.1 mouse_genomes_project 12 102270870 102359407 + MGP_129S1SvImJ_P0035702 9030617O03Rik protein_coding protein_coding MGP_129S1SvImJ_T0035703.1 MGP_129S1SvImJ_G0020020.1 mouse_genomes_project 12 102351084 102362462 + MGP_129S1SvImJ_P0035703 9030617O03Rik protein_coding protein_coding MGP_129S1SvImJ_T0035708.1 MGP_129S1SvImJ_G0020020.1 mouse_genomes_project 12 102372644 102382604 + 9030617O03Rik protein_coding processed_transcript MGP_129S1SvImJ_T0009798.1 MGP_129S1SvImJ_G0007914.1 mouse_genomes_project 12 28461896 28462103 - Gm25243 miRNA miRNA MGP_129S1SvImJ_T0036030.1 MGP_129S1SvImJ_G0020139.1 mouse_genomes_project 12 114112835 114116604 - MGP_129S1SvImJ_P0036030 Bag5 protein_coding protein_coding MGP_129S1SvImJ_T0036031.1 MGP_129S1SvImJ_G0020139.1 mouse_genomes_project 12 114113251 114116274 - MGP_129S1SvImJ_P0036031 Bag5 protein_coding protein_coding MGP_129S1SvImJ_T0036032.1 MGP_129S1SvImJ_G0020139.1 mouse_genomes_project 12 114114556 114116300 - MGP_129S1SvImJ_P0036032 Bag5 protein_coding protein_coding MGP_129S1SvImJ_T0036033.1 MGP_129S1SvImJ_G0020139.1 mouse_genomes_project 12 114114622 114116300 - MGP_129S1SvImJ_P0036033 Bag5 protein_coding protein_coding MGP_129S1SvImJ_T0035963.1 MGP_129S1SvImJ_G0020118.1 mouse_genomes_project 12 112908032 112982386 + MGP_129S1SvImJ_P0035963 Dync1h1 protein_coding protein_coding MGP_129S1SvImJ_T0035964.1 MGP_129S1SvImJ_G0020118.1 mouse_genomes_project 12 112951208 112952221 + Dync1h1 protein_coding retained_intron MGP_129S1SvImJ_T0035965.1 MGP_129S1SvImJ_G0020118.1 mouse_genomes_project 12 112966866 112970870 + MGP_129S1SvImJ_P0035965 Dync1h1 protein_coding protein_coding MGP_129S1SvImJ_T0035966.1 MGP_129S1SvImJ_G0020118.1 mouse_genomes_project 12 112969107 112970046 + Dync1h1 protein_coding retained_intron MGP_129S1SvImJ_T0035967.1 MGP_129S1SvImJ_G0020118.1 mouse_genomes_project 12 112971794 112972544 + Dync1h1 protein_coding retained_intron MGP_129S1SvImJ_T0035968.1 MGP_129S1SvImJ_G0020118.1 mouse_genomes_project 12 112976079 112976911 + Dync1h1 protein_coding retained_intron MGP_129S1SvImJ_T0035969.1 MGP_129S1SvImJ_G0020118.1 mouse_genomes_project 12 112976374 112976942 + Dync1h1 protein_coding retained_intron MGP_129S1SvImJ_T0035970.1 MGP_129S1SvImJ_G0020118.1 mouse_genomes_project 12 112978629 112980315 + Dync1h1 protein_coding retained_intron MGP_129S1SvImJ_T0009860.1 MGP_129S1SvImJ_G0007976.1 mouse_genomes_project 12 111852441 111852528 + Gm23912 miRNA miRNA MGP_129S1SvImJ_T0102181.1 MGP_129S1SvImJ_G0040015.1 mouse_genomes_project 12 106149072 106154600 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099325.1 MGP_129S1SvImJ_G0037392.1 mouse_genomes_project 12 69286847 69286953 - Gm24449 snRNA snRNA MGP_129S1SvImJ_T0034526.1 MGP_129S1SvImJ_G0019623.1 mouse_genomes_project 12 18839519 18869109 + MGP_129S1SvImJ_P0034526 Cpsf3 protein_coding protein_coding MGP_129S1SvImJ_T0036105.1 MGP_129S1SvImJ_G0020164.1 mouse_genomes_project 12 115391390 115412297 - MGP_129S1SvImJ_P0036105 Jag2 protein_coding protein_coding MGP_129S1SvImJ_T0034624.1 MGP_129S1SvImJ_G0019660.1 mouse_genomes_project 12 29337443 29404079 + MGP_129S1SvImJ_P0034624 Slc26a3 protein_coding protein_coding MGP_129S1SvImJ_T0034625.1 MGP_129S1SvImJ_G0019660.1 mouse_genomes_project 12 29391372 29428074 + MGP_129S1SvImJ_P0034625 Slc26a3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034626.1 MGP_129S1SvImJ_G0019660.1 mouse_genomes_project 12 29391374 29428496 + MGP_129S1SvImJ_P0034626 Slc26a3 protein_coding protein_coding MGP_129S1SvImJ_T0034627.1 MGP_129S1SvImJ_G0019660.1 mouse_genomes_project 12 29391374 29405970 + MGP_129S1SvImJ_P0034627 Slc26a3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034628.1 MGP_129S1SvImJ_G0019660.1 mouse_genomes_project 12 29391388 29405989 + Slc26a3 protein_coding retained_intron MGP_129S1SvImJ_T0034629.1 MGP_129S1SvImJ_G0019660.1 mouse_genomes_project 12 29400583 29408170 + Slc26a3 protein_coding retained_intron MGP_129S1SvImJ_T0034630.1 MGP_129S1SvImJ_G0019660.1 mouse_genomes_project 12 29425445 29426397 + MGP_129S1SvImJ_P0034630 Slc26a3 protein_coding protein_coding MGP_129S1SvImJ_T0035913.1 MGP_129S1SvImJ_G0020103.1 mouse_genomes_project 12 110406694 110439784 + MGP_129S1SvImJ_P0035913 Hhipl1 protein_coding protein_coding MGP_129S1SvImJ_T0000072.1 MGP_129S1SvImJ_G0000058.1 mouse_genomes_project 12 116757871 116758336 - MGP_129S1SvImJ_P0000072 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0034834.1 MGP_129S1SvImJ_G0019742.1 mouse_genomes_project 12 54003484 54248793 - MGP_129S1SvImJ_P0034834 2700097O09Rik protein_coding protein_coding MGP_129S1SvImJ_T0034835.1 MGP_129S1SvImJ_G0019742.1 mouse_genomes_project 12 54003499 54011931 - 2700097O09Rik protein_coding retained_intron MGP_129S1SvImJ_T0034836.1 MGP_129S1SvImJ_G0019742.1 mouse_genomes_project 12 54011583 54248791 - 2700097O09Rik protein_coding retained_intron MGP_129S1SvImJ_T0036079.1 MGP_129S1SvImJ_G0020154.1 mouse_genomes_project 12 115076523 115099729 + MGP_129S1SvImJ_P0036079 Adssl1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0036080.1 MGP_129S1SvImJ_G0020154.1 mouse_genomes_project 12 115076527 115099725 + MGP_129S1SvImJ_P0036080 Adssl1 protein_coding protein_coding MGP_129S1SvImJ_T0036081.1 MGP_129S1SvImJ_G0020154.1 mouse_genomes_project 12 115076529 115099740 + MGP_129S1SvImJ_P0036081 Adssl1 protein_coding protein_coding MGP_129S1SvImJ_T0034669.1 MGP_129S1SvImJ_G0019673.1 mouse_genomes_project 12 31083018 31149492 - MGP_129S1SvImJ_P0034669 Cdhr3 protein_coding protein_coding MGP_129S1SvImJ_T0006426.1 MGP_129S1SvImJ_G0005356.1 mouse_genomes_project 12 31169565 31198911 + Gm16267 lincRNA lincRNA MGP_129S1SvImJ_T0100583.1 MGP_129S1SvImJ_G0038650.1 mouse_genomes_project 12 81962225 81968682 + Gm24853 snoRNA snoRNA MGP_129S1SvImJ_T0034815.1 MGP_129S1SvImJ_G0019734.1 mouse_genomes_project 12 52111256 52956914 + MGP_129S1SvImJ_P0034815 Npas3 protein_coding protein_coding MGP_129S1SvImJ_T0034816.1 MGP_129S1SvImJ_G0019734.1 mouse_genomes_project 12 52111256 52956915 + MGP_129S1SvImJ_P0034816 Npas3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0034858.1 MGP_129S1SvImJ_G0019754.1 mouse_genomes_project 12 55433520 55451618 - MGP_129S1SvImJ_P0034858 Mbip protein_coding protein_coding MGP_129S1SvImJ_T0034448.1 MGP_129S1SvImJ_G0019593.1 mouse_genomes_project 12 6684984 6692046 + MGP_129S1SvImJ_P0034448 Osr1 protein_coding protein_coding MGP_129S1SvImJ_T0036150.1 MGP_129S1SvImJ_G0020179.1 mouse_genomes_project 12 118935802 119000575 + Vipr2 protein_coding retained_intron MGP_129S1SvImJ_T0036151.1 MGP_129S1SvImJ_G0020179.1 mouse_genomes_project 12 118935804 119006806 + MGP_129S1SvImJ_P0036151 Vipr2 protein_coding protein_coding MGP_129S1SvImJ_T0036152.1 MGP_129S1SvImJ_G0020179.1 mouse_genomes_project 12 118935836 118959306 + Vipr2 protein_coding processed_transcript MGP_129S1SvImJ_T0036153.1 MGP_129S1SvImJ_G0020179.1 mouse_genomes_project 12 118935842 118954185 + Vipr2 protein_coding processed_transcript MGP_129S1SvImJ_T0036154.1 MGP_129S1SvImJ_G0020179.1 mouse_genomes_project 12 118935849 118993938 + Vipr2 protein_coding processed_transcript MGP_129S1SvImJ_T0036155.1 MGP_129S1SvImJ_G0020179.1 mouse_genomes_project 12 118997960 119004341 + MGP_129S1SvImJ_P0036155 Vipr2 protein_coding protein_coding MGP_129S1SvImJ_T0100550.1 MGP_129S1SvImJ_G0038617.1 mouse_genomes_project 12 14346893 14347007 + Gm22303 snoRNA snoRNA MGP_129S1SvImJ_T0006521.1 MGP_129S1SvImJ_G0005419.1 mouse_genomes_project 12 115429434 115433584 - Gm26583 lincRNA lincRNA MGP_129S1SvImJ_T0035861.1 MGP_129S1SvImJ_G0020086.1 mouse_genomes_project 12 107017077 107042028 + MGP_129S1SvImJ_P0035861 Tcl1b3 protein_coding protein_coding MGP_129S1SvImJ_T0000255.1 MGP_129S1SvImJ_G0000197.1 mouse_genomes_project 12 116135946 116136415 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0098477.1 MGP_129S1SvImJ_G0036562.1 mouse_genomes_project 12 91929093 91929210 + n-R5s65 rRNA rRNA MGP_129S1SvImJ_T0006408.1 MGP_129S1SvImJ_G0005342.1 mouse_genomes_project 12 5948199 5952472 - 9930038B18Rik lincRNA lincRNA MGP_129S1SvImJ_T0009833.1 MGP_129S1SvImJ_G0007949.1 mouse_genomes_project 12 104332605 104332698 - Mir1936 miRNA miRNA MGP_129S1SvImJ_T0035660.1 MGP_129S1SvImJ_G0020010.1 mouse_genomes_project 12 100332459 100387623 + MGP_129S1SvImJ_P0035660 Ttc8 protein_coding protein_coding MGP_129S1SvImJ_T0035661.1 MGP_129S1SvImJ_G0020010.1 mouse_genomes_project 12 100332497 100387629 + MGP_129S1SvImJ_P0035661 Ttc8 protein_coding protein_coding MGP_129S1SvImJ_T0035662.1 MGP_129S1SvImJ_G0020010.1 mouse_genomes_project 12 100332704 100366427 + MGP_129S1SvImJ_P0035662 Ttc8 protein_coding protein_coding MGP_129S1SvImJ_T0035663.1 MGP_129S1SvImJ_G0020010.1 mouse_genomes_project 12 100348592 100375033 + Ttc8 protein_coding processed_transcript MGP_129S1SvImJ_T0035664.1 MGP_129S1SvImJ_G0020010.1 mouse_genomes_project 12 100378461 100386761 + Ttc8 protein_coding processed_transcript MGP_129S1SvImJ_T0035665.1 MGP_129S1SvImJ_G0020010.1 mouse_genomes_project 12 100378490 100384062 + Ttc8 protein_coding processed_transcript MGP_129S1SvImJ_T0034782.1 MGP_129S1SvImJ_G0019715.1 mouse_genomes_project 12 46497291 46497759 + MGP_129S1SvImJ_P0034782 protein_coding protein_coding MGP_129S1SvImJ_T0036075.1 MGP_129S1SvImJ_G0020151.1 mouse_genomes_project 12 114943072 114953551 + MGP_129S1SvImJ_P0036075 A530016L24Rik protein_coding protein_coding MGP_129S1SvImJ_T0009794.1 MGP_129S1SvImJ_G0007910.1 mouse_genomes_project 12 14786157 14786240 + Mir3066 miRNA miRNA MGP_129S1SvImJ_T0035642.1 MGP_129S1SvImJ_G0020003.1 mouse_genomes_project 12 99568124 99625871 - MGP_129S1SvImJ_P0035642 Galc protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035643.1 MGP_129S1SvImJ_G0020003.1 mouse_genomes_project 12 99568131 99626049 - MGP_129S1SvImJ_P0035643 Galc protein_coding protein_coding MGP_129S1SvImJ_T0000292.1 MGP_129S1SvImJ_G0000234.1 mouse_genomes_project 12 118764868 118871370 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0035253.1 MGP_129S1SvImJ_G0019898.1 mouse_genomes_project 12 81645274 81784731 - MGP_129S1SvImJ_P0035253 Slc8a3 protein_coding protein_coding MGP_129S1SvImJ_T0035254.1 MGP_129S1SvImJ_G0019898.1 mouse_genomes_project 12 81645635 81784526 - MGP_129S1SvImJ_P0035254 Slc8a3 protein_coding protein_coding MGP_129S1SvImJ_T0035255.1 MGP_129S1SvImJ_G0019898.1 mouse_genomes_project 12 81646805 81784747 - MGP_129S1SvImJ_P0035255 Slc8a3 protein_coding protein_coding MGP_129S1SvImJ_T0035256.1 MGP_129S1SvImJ_G0019898.1 mouse_genomes_project 12 81649756 81744067 - MGP_129S1SvImJ_P0035256 Slc8a3 protein_coding protein_coding MGP_129S1SvImJ_T0035257.1 MGP_129S1SvImJ_G0019898.1 mouse_genomes_project 12 81661383 81784747 - Slc8a3 protein_coding retained_intron MGP_129S1SvImJ_T0035850.1 MGP_129S1SvImJ_G0020077.1 mouse_genomes_project 12 106268838 106270961 - MGP_129S1SvImJ_P0035850 Gsc protein_coding protein_coding MGP_129S1SvImJ_T0035206.1 MGP_129S1SvImJ_G0019880.1 mouse_genomes_project 12 79436357 79453002 - MGP_129S1SvImJ_P0035206 Vti1b protein_coding protein_coding MGP_129S1SvImJ_T0035207.1 MGP_129S1SvImJ_G0019880.1 mouse_genomes_project 12 79436510 79452783 - MGP_129S1SvImJ_P0035207 Vti1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035208.1 MGP_129S1SvImJ_G0019880.1 mouse_genomes_project 12 79436669 79445476 - MGP_129S1SvImJ_P0035208 Vti1b protein_coding protein_coding MGP_129S1SvImJ_T0035209.1 MGP_129S1SvImJ_G0019880.1 mouse_genomes_project 12 79436857 79446705 - MGP_129S1SvImJ_P0035209 Vti1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0000090.1 MGP_129S1SvImJ_G0000069.1 mouse_genomes_project 12 117007438 117007896 - MGP_129S1SvImJ_P0000090 Ighv6-3 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0006462.1 MGP_129S1SvImJ_G0005387.1 mouse_genomes_project 12 101064612 101066536 - 1700064M15Rik lincRNA lincRNA MGP_129S1SvImJ_T0011346.1 MGP_129S1SvImJ_G0009462.1 mouse_genomes_project 12 61233041 61233354 + Gm23213 misc_RNA misc_RNA MGP_129S1SvImJ_T0009918.1 MGP_129S1SvImJ_G0008034.1 mouse_genomes_project 12 115985319 115985417 - Gm22175 miRNA miRNA MGP_129S1SvImJ_T0100566.1 MGP_129S1SvImJ_G0038633.1 mouse_genomes_project 12 44617463 44617670 + Gm24948 snoRNA snoRNA MGP_129S1SvImJ_T0003435.1 MGP_129S1SvImJ_G0003153.1 mouse_genomes_project 12 85842628 85844483 + Prox2os antisense antisense MGP_129S1SvImJ_T0009915.1 MGP_129S1SvImJ_G0008031.1 mouse_genomes_project 12 115554852 115554952 - Gm44471 miRNA miRNA MGP_129S1SvImJ_T0009889.1 MGP_129S1SvImJ_G0008005.1 mouse_genomes_project 12 111971774 111971848 + Mir539 miRNA miRNA MGP_129S1SvImJ_T0000052.1 MGP_129S1SvImJ_G0000042.1 mouse_genomes_project 12 117350243 117350537 + MGP_129S1SvImJ_P0000052 Ighv1-13 IG_LV_gene IG_LV_gene MGP_129S1SvImJ_T0035872.1 MGP_129S1SvImJ_G0020092.1 mouse_genomes_project 12 107484179 107486434 + MGP_129S1SvImJ_P0035872 Bdkrb1 protein_coding protein_coding MGP_129S1SvImJ_T0035873.1 MGP_129S1SvImJ_G0020092.1 mouse_genomes_project 12 107484213 107486077 + MGP_129S1SvImJ_P0035873 Bdkrb1 protein_coding protein_coding MGP_129S1SvImJ_T0035874.1 MGP_129S1SvImJ_G0020092.1 mouse_genomes_project 12 107485185 107486523 + MGP_129S1SvImJ_P0035874 Bdkrb1 protein_coding protein_coding MGP_129S1SvImJ_T0006449.1 MGP_129S1SvImJ_G0005374.1 mouse_genomes_project 12 81337126 81338144 - 1700052I22Rik lincRNA lincRNA MGP_129S1SvImJ_T0035943.1 MGP_129S1SvImJ_G0020113.1 mouse_genomes_project 12 111208205 111229550 - MGP_129S1SvImJ_P0035943 Begain protein_coding unknown_likely_coding MGP_129S1SvImJ_T0035944.1 MGP_129S1SvImJ_G0020113.1 mouse_genomes_project 12 111208215 111249152 - MGP_129S1SvImJ_P0035944 Begain protein_coding protein_coding MGP_129S1SvImJ_T0035945.1 MGP_129S1SvImJ_G0020113.1 mouse_genomes_project 12 111210638 111213116 - Begain protein_coding retained_intron MGP_129S1SvImJ_T0035946.1 MGP_129S1SvImJ_G0020113.1 mouse_genomes_project 12 111213680 111229610 - Begain protein_coding processed_transcript MGP_129S1SvImJ_T0099313.1 MGP_129S1SvImJ_G0037380.1 mouse_genomes_project 12 53139220 53139366 - Gm24692 snRNA snRNA MGP_129S1SvImJ_T0012809.1 MGP_129S1SvImJ_G0010898.1 mouse_genomes_project 12 43523816 43525286 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0035376.1 MGP_129S1SvImJ_G0019930.1 mouse_genomes_project 12 84832756 84909230 - MGP_129S1SvImJ_P0035376 Elmsan1 protein_coding protein_coding MGP_129S1SvImJ_T0035377.1 MGP_129S1SvImJ_G0019930.1 mouse_genomes_project 12 84832858 84882440 - MGP_129S1SvImJ_P0035377 Elmsan1 protein_coding protein_coding MGP_129S1SvImJ_T0035378.1 MGP_129S1SvImJ_G0019930.1 mouse_genomes_project 12 84838766 84842268 - Elmsan1 protein_coding processed_transcript MGP_129S1SvImJ_T0035379.1 MGP_129S1SvImJ_G0019930.1 mouse_genomes_project 12 84843563 84847174 - Elmsan1 protein_coding processed_transcript MGP_129S1SvImJ_T0034468.1 MGP_129S1SvImJ_G0019606.1 mouse_genomes_project 12 10526917 10858392 + MGP_129S1SvImJ_P0034468 Nbas protein_coding protein_coding MGP_129S1SvImJ_T0035155.1 MGP_129S1SvImJ_G0019856.1 mouse_genomes_project 12 76452891 76463776 - MGP_129S1SvImJ_P0035155 Zbtb25 protein_coding protein_coding MGP_129S1SvImJ_T0035156.1 MGP_129S1SvImJ_G0019856.1 mouse_genomes_project 12 76455225 76481230 - MGP_129S1SvImJ_P0035156 Zbtb25 protein_coding protein_coding MGP_129S1SvImJ_T0035157.1 MGP_129S1SvImJ_G0019856.1 mouse_genomes_project 12 76455269 76480765 - MGP_129S1SvImJ_P0035157 Zbtb25 protein_coding protein_coding MGP_129S1SvImJ_T0035158.1 MGP_129S1SvImJ_G0019856.1 mouse_genomes_project 12 76455270 76481368 - MGP_129S1SvImJ_P0035158 Zbtb25 protein_coding protein_coding MGP_129S1SvImJ_T0035159.1 MGP_129S1SvImJ_G0019856.1 mouse_genomes_project 12 76456351 76481159 - MGP_129S1SvImJ_P0035159 Zbtb25 protein_coding protein_coding MGP_129S1SvImJ_T0035160.1 MGP_129S1SvImJ_G0019856.1 mouse_genomes_project 12 76456468 76481230 - MGP_129S1SvImJ_P0035160 Zbtb25 protein_coding protein_coding MGP_129S1SvImJ_T0034515.1 MGP_129S1SvImJ_G0019620.1 mouse_genomes_project 12 14995589 15005083 + MGP_129S1SvImJ_P0034515 Odc1 protein_coding protein_coding MGP_129S1SvImJ_T0034516.1 MGP_129S1SvImJ_G0019620.1 mouse_genomes_project 12 14995681 15005091 + MGP_129S1SvImJ_P0034516 Odc1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0098735.1 MGP_129S1SvImJ_G0036820.1 mouse_genomes_project 12 80752764 80752903 - Scarna3b scaRNA scaRNA MGP_129S1SvImJ_T0012843.1 MGP_129S1SvImJ_G0010932.1 mouse_genomes_project 12 93025803 93026181 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011360.1 MGP_129S1SvImJ_G0009476.1 mouse_genomes_project 12 111771548 111771645 + Gm27335 misc_RNA misc_RNA MGP_129S1SvImJ_T0036000.1 MGP_129S1SvImJ_G0020127.1 mouse_genomes_project 12 113525481 113553799 - MGP_129S1SvImJ_P0036000 4930595D18Rik protein_coding protein_coding MGP_129S1SvImJ_T0035486.1 MGP_129S1SvImJ_G0019963.1 mouse_genomes_project 12 86476024 86500677 + MGP_129S1SvImJ_P0035486 Batf protein_coding protein_coding MGP_129S1SvImJ_T0009813.1 MGP_129S1SvImJ_G0007929.1 mouse_genomes_project 12 69261127 69261236 - Gm23018 miRNA miRNA MGP_129S1SvImJ_T0003449.1 MGP_129S1SvImJ_G0003165.1 mouse_genomes_project 12 120126473 120236054 - Gm5441 antisense antisense MGP_129S1SvImJ_T0003450.1 MGP_129S1SvImJ_G0003165.1 mouse_genomes_project 12 120174331 120236064 - Gm5441 antisense antisense MGP_129S1SvImJ_T0000115.1 MGP_129S1SvImJ_G0000088.1 mouse_genomes_project 12 117908956 118420401 - MGP_129S1SvImJ_P0000115 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000073.1 MGP_129S1SvImJ_G0000059.1 mouse_genomes_project 12 116786908 116787338 - MGP_129S1SvImJ_P0000073 Ighv14-4 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000074.1 MGP_129S1SvImJ_G0000059.1 mouse_genomes_project 12 116786914 116787333 - MGP_129S1SvImJ_P0000074 Ighv14-4 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0009801.1 MGP_129S1SvImJ_G0007917.1 mouse_genomes_project 12 33490691 33490806 + Gm44396 miRNA miRNA MGP_129S1SvImJ_T0035848.1 MGP_129S1SvImJ_G0020075.1 mouse_genomes_project 12 106178146 106185239 + MGP_129S1SvImJ_P0035848 Serpina3m protein_coding protein_coding MGP_129S1SvImJ_T0099314.1 MGP_129S1SvImJ_G0037381.1 mouse_genomes_project 12 53633963 53634127 + Gm22513 snRNA snRNA MGP_129S1SvImJ_T0000879.1 MGP_129S1SvImJ_G0000812.1 mouse_genomes_project 12 9810076 9810609 + TEC TEC MGP_129S1SvImJ_T0098308.1 MGP_129S1SvImJ_G0036393.1 mouse_genomes_project 12 85123106 85124490 + pseudogene pseudogene MGP_129S1SvImJ_T0006473.1 MGP_129S1SvImJ_G0005397.1 mouse_genomes_project 12 108670909 108704681 - 4933406K04Rik lincRNA lincRNA MGP_129S1SvImJ_T0006474.1 MGP_129S1SvImJ_G0005397.1 mouse_genomes_project 12 108681699 108704643 - 4933406K04Rik lincRNA lincRNA MGP_129S1SvImJ_T0006475.1 MGP_129S1SvImJ_G0005397.1 mouse_genomes_project 12 108688123 108704652 - 4933406K04Rik lincRNA lincRNA MGP_129S1SvImJ_T0006476.1 MGP_129S1SvImJ_G0005397.1 mouse_genomes_project 12 108693013 108704681 - 4933406K04Rik lincRNA lincRNA MGP_129S1SvImJ_T0009895.1 MGP_129S1SvImJ_G0008011.1 mouse_genomes_project 12 111978547 111978620 + Mir485 miRNA miRNA MGP_129S1SvImJ_T0035164.1 MGP_129S1SvImJ_G0019860.1 mouse_genomes_project 12 76562799 76569576 + MGP_129S1SvImJ_P0035164 Gm10451 protein_coding protein_coding MGP_129S1SvImJ_T0036140.1 MGP_129S1SvImJ_G0020175.1 mouse_genomes_project 12 115684438 115688040 + MGP_129S1SvImJ_P0036140 Tmem121 protein_coding protein_coding MGP_129S1SvImJ_T0035413.1 MGP_129S1SvImJ_G0019936.1 mouse_genomes_project 12 85114496 85143049 + MGP_129S1SvImJ_P0035413 Bbof1 protein_coding protein_coding MGP_129S1SvImJ_T0035414.1 MGP_129S1SvImJ_G0019936.1 mouse_genomes_project 12 85119178 85137690 + MGP_129S1SvImJ_P0035414 Bbof1 protein_coding protein_coding MGP_129S1SvImJ_T0035416.1 MGP_129S1SvImJ_G0019936.1 mouse_genomes_project 12 85125886 85139649 + MGP_129S1SvImJ_P0035416 Bbof1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0012831.1 MGP_129S1SvImJ_G0010920.1 mouse_genomes_project 12 76224325 76224617 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0034988.1 MGP_129S1SvImJ_G0019800.1 mouse_genomes_project 12 69432739 69455680 + MGP_129S1SvImJ_P0034988 Atp5s protein_coding protein_coding MGP_129S1SvImJ_T0034570.1 MGP_129S1SvImJ_G0019638.1 mouse_genomes_project 12 24203328 24216339 + MGP_129S1SvImJ_P0034570 Cmpk2 protein_coding protein_coding MGP_129S1SvImJ_T0035760.1 MGP_129S1SvImJ_G0020041.1 mouse_genomes_project 12 104443207 104531397 - MGP_129S1SvImJ_P0035760 Btbd7 protein_coding protein_coding MGP_129S1SvImJ_T0035715.1 MGP_129S1SvImJ_G0020024.1 mouse_genomes_project 12 103235148 103306468 - MGP_129S1SvImJ_P0035715 Tc2n protein_coding protein_coding MGP_129S1SvImJ_T0035716.1 MGP_129S1SvImJ_G0020024.1 mouse_genomes_project 12 103236261 103302157 - MGP_129S1SvImJ_P0035716 Tc2n protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035717.1 MGP_129S1SvImJ_G0020024.1 mouse_genomes_project 12 103240662 103299790 - MGP_129S1SvImJ_P0035717 Tc2n protein_coding protein_coding MGP_129S1SvImJ_T0035718.1 MGP_129S1SvImJ_G0020024.1 mouse_genomes_project 12 103240709 103301825 - MGP_129S1SvImJ_P0035718 Tc2n protein_coding protein_coding MGP_129S1SvImJ_T0012811.1 MGP_129S1SvImJ_G0010900.1 mouse_genomes_project 12 48567882 48568877 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000127.1 MGP_129S1SvImJ_G0000099.1 mouse_genomes_project 12 118781662 118782140 - MGP_129S1SvImJ_P0000127 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0035042.1 MGP_129S1SvImJ_G0019817.1 mouse_genomes_project 12 70916599 71018975 + MGP_129S1SvImJ_P0035042 2700049A03Rik protein_coding protein_coding MGP_129S1SvImJ_T0035043.1 MGP_129S1SvImJ_G0019817.1 mouse_genomes_project 12 70916599 71018975 + MGP_129S1SvImJ_P0035043 2700049A03Rik protein_coding protein_coding MGP_129S1SvImJ_T0035044.1 MGP_129S1SvImJ_G0019817.1 mouse_genomes_project 12 70931576 70936026 + MGP_129S1SvImJ_P0035044 2700049A03Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035045.1 MGP_129S1SvImJ_G0019817.1 mouse_genomes_project 12 70951538 71018971 + MGP_129S1SvImJ_P0035045 2700049A03Rik protein_coding protein_coding MGP_129S1SvImJ_T0100609.1 MGP_129S1SvImJ_G0038676.1 mouse_genomes_project 12 111921796 111921871 + AF357341 snoRNA snoRNA MGP_129S1SvImJ_T0009875.1 MGP_129S1SvImJ_G0007991.1 mouse_genomes_project 12 111959318 111959439 + Mir1193 miRNA miRNA MGP_129S1SvImJ_T0034361.1 MGP_129S1SvImJ_G0019560.1 mouse_genomes_project 12 777712 778109 + MGP_129S1SvImJ_P0034361 Gm17728 protein_coding protein_coding MGP_129S1SvImJ_T0036071.1 MGP_129S1SvImJ_G0020148.1 mouse_genomes_project 12 114540147 114561038 + MGP_129S1SvImJ_P0036071 Aspg protein_coding protein_coding MGP_129S1SvImJ_T0035856.1 MGP_129S1SvImJ_G0020082.1 mouse_genomes_project 12 106756448 106809520 - MGP_129S1SvImJ_P0035856 Syne3 protein_coding protein_coding MGP_129S1SvImJ_T0009874.1 MGP_129S1SvImJ_G0007990.1 mouse_genomes_project 12 111959224 111959298 + Mir679 miRNA miRNA MGP_129S1SvImJ_T0102171.1 MGP_129S1SvImJ_G0040005.1 mouse_genomes_project 12 105394799 105399879 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0098471.1 MGP_129S1SvImJ_G0036556.1 mouse_genomes_project 12 55148235 55148355 - Gm23799 rRNA rRNA MGP_129S1SvImJ_T0034588.1 MGP_129S1SvImJ_G0019648.1 mouse_genomes_project 12 27397748 27811854 + MGP_129S1SvImJ_P0034588 Myt1l protein_coding protein_coding MGP_129S1SvImJ_T0034589.1 MGP_129S1SvImJ_G0019648.1 mouse_genomes_project 12 27404237 27811854 + MGP_129S1SvImJ_P0034589 Myt1l protein_coding protein_coding MGP_129S1SvImJ_T0035227.1 MGP_129S1SvImJ_G0019889.1 mouse_genomes_project 12 80884480 80979760 + MGP_129S1SvImJ_P0035227 Galnt16 protein_coding protein_coding MGP_129S1SvImJ_T0035846.1 MGP_129S1SvImJ_G0020073.1 mouse_genomes_project 12 106077640 106083822 + MGP_129S1SvImJ_P0035846 Serpina3j protein_coding protein_coding MGP_129S1SvImJ_T0036111.1 MGP_129S1SvImJ_G0020169.1 mouse_genomes_project 12 115502617 115565923 + MGP_129S1SvImJ_P0036111 Pacs2 protein_coding protein_coding MGP_129S1SvImJ_T0035449.1 MGP_129S1SvImJ_G0019950.1 mouse_genomes_project 12 85751031 85825846 + MGP_129S1SvImJ_P0035449 Ylpm1 protein_coding protein_coding MGP_129S1SvImJ_T0035450.1 MGP_129S1SvImJ_G0019950.1 mouse_genomes_project 12 85751062 85825869 + MGP_129S1SvImJ_P0035450 Ylpm1 protein_coding protein_coding MGP_129S1SvImJ_T0035451.1 MGP_129S1SvImJ_G0019950.1 mouse_genomes_project 12 85751165 85825868 + MGP_129S1SvImJ_P0035451 Ylpm1 protein_coding protein_coding MGP_129S1SvImJ_T0035452.1 MGP_129S1SvImJ_G0019950.1 mouse_genomes_project 12 85770064 85825846 + MGP_129S1SvImJ_P0035452 Ylpm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035453.1 MGP_129S1SvImJ_G0019950.1 mouse_genomes_project 12 85797571 85814681 + Ylpm1 protein_coding retained_intron MGP_129S1SvImJ_T0035454.1 MGP_129S1SvImJ_G0019950.1 mouse_genomes_project 12 85805034 85805966 + Ylpm1 protein_coding retained_intron MGP_129S1SvImJ_T0035455.1 MGP_129S1SvImJ_G0019950.1 mouse_genomes_project 12 85815304 85825603 + Ylpm1 protein_coding retained_intron MGP_129S1SvImJ_T0035456.1 MGP_129S1SvImJ_G0019950.1 mouse_genomes_project 12 85820023 85825769 + Ylpm1 protein_coding retained_intron MGP_129S1SvImJ_T0035780.1 MGP_129S1SvImJ_G0020046.1 mouse_genomes_project 12 104999868 105034904 - MGP_129S1SvImJ_P0035780 Asb2 protein_coding protein_coding MGP_129S1SvImJ_T0035781.1 MGP_129S1SvImJ_G0020046.1 mouse_genomes_project 12 104999872 105014317 - Asb2 protein_coding retained_intron MGP_129S1SvImJ_T0035782.1 MGP_129S1SvImJ_G0020046.1 mouse_genomes_project 12 104999872 105017106 - MGP_129S1SvImJ_P0035782 Asb2 protein_coding protein_coding MGP_129S1SvImJ_T0035783.1 MGP_129S1SvImJ_G0020046.1 mouse_genomes_project 12 105013601 105015467 - Asb2 protein_coding processed_transcript MGP_129S1SvImJ_T0035171.1 MGP_129S1SvImJ_G0019864.1 mouse_genomes_project 12 76889809 77062820 + MGP_129S1SvImJ_P0035171 Fntb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035172.1 MGP_129S1SvImJ_G0019864.1 mouse_genomes_project 12 76889818 77062456 + MGP_129S1SvImJ_P0035172 Fntb protein_coding protein_coding MGP_129S1SvImJ_T0035181.1 MGP_129S1SvImJ_G0019864.1 mouse_genomes_project 12 76966286 77063573 + MGP_129S1SvImJ_P0035181 Fntb protein_coding protein_coding MGP_129S1SvImJ_T0035182.1 MGP_129S1SvImJ_G0019864.1 mouse_genomes_project 12 76966305 76975834 + Fntb protein_coding processed_transcript MGP_129S1SvImJ_T0035183.1 MGP_129S1SvImJ_G0019864.1 mouse_genomes_project 12 76969169 77026823 + Fntb protein_coding processed_transcript MGP_129S1SvImJ_T0035184.1 MGP_129S1SvImJ_G0019864.1 mouse_genomes_project 12 77026075 77051441 + Fntb protein_coding processed_transcript MGP_129S1SvImJ_T0035185.1 MGP_129S1SvImJ_G0019864.1 mouse_genomes_project 12 77049498 77051520 + Fntb protein_coding processed_transcript MGP_129S1SvImJ_T0035186.1 MGP_129S1SvImJ_G0019864.1 mouse_genomes_project 12 77051186 77057387 + Fntb protein_coding retained_intron MGP_129S1SvImJ_T0034440.1 MGP_129S1SvImJ_G0019591.1 mouse_genomes_project 12 6062036 6119998 + MGP_129S1SvImJ_P0034440 Wdr35 protein_coding protein_coding MGP_129S1SvImJ_T0034441.1 MGP_129S1SvImJ_G0019591.1 mouse_genomes_project 12 6062155 6080716 + Wdr35 protein_coding retained_intron MGP_129S1SvImJ_T0034442.1 MGP_129S1SvImJ_G0019591.1 mouse_genomes_project 12 6062155 6082479 + MGP_129S1SvImJ_P0034442 Wdr35 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0034443.1 MGP_129S1SvImJ_G0019591.1 mouse_genomes_project 12 6062191 6119997 + MGP_129S1SvImJ_P0034443 Wdr35 protein_coding protein_coding MGP_129S1SvImJ_T0034444.1 MGP_129S1SvImJ_G0019591.1 mouse_genomes_project 12 6062203 6114146 + Wdr35 protein_coding retained_intron MGP_129S1SvImJ_T0034445.1 MGP_129S1SvImJ_G0019591.1 mouse_genomes_project 12 6063013 6074774 + Wdr35 protein_coding retained_intron MGP_129S1SvImJ_T0034446.1 MGP_129S1SvImJ_G0019591.1 mouse_genomes_project 12 6113752 6115617 + Wdr35 protein_coding retained_intron MGP_129S1SvImJ_T0000263.1 MGP_129S1SvImJ_G0000205.1 mouse_genomes_project 12 116555697 116556127 - IG_V_pseudogene IG_V_pseudogene MGP_129S1SvImJ_T0035720.1 MGP_129S1SvImJ_G0020026.1 mouse_genomes_project 12 103432246 103517051 - MGP_129S1SvImJ_P0035720 Trip11 protein_coding protein_coding MGP_129S1SvImJ_T0035721.1 MGP_129S1SvImJ_G0020026.1 mouse_genomes_project 12 103435746 103496206 - MGP_129S1SvImJ_P0035721 Trip11 protein_coding protein_coding MGP_129S1SvImJ_T0035722.1 MGP_129S1SvImJ_G0020026.1 mouse_genomes_project 12 103472389 103484608 - MGP_129S1SvImJ_P0035722 Trip11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035723.1 MGP_129S1SvImJ_G0020026.1 mouse_genomes_project 12 103487220 103516907 - MGP_129S1SvImJ_P0035723 Trip11 protein_coding protein_coding MGP_129S1SvImJ_T0035724.1 MGP_129S1SvImJ_G0020026.1 mouse_genomes_project 12 103491453 103516924 - MGP_129S1SvImJ_P0035724 Trip11 protein_coding protein_coding MGP_129S1SvImJ_T0035725.1 MGP_129S1SvImJ_G0020026.1 mouse_genomes_project 12 103516059 103516939 - Trip11 protein_coding processed_transcript MGP_129S1SvImJ_T0006424.1 MGP_129S1SvImJ_G0005355.1 mouse_genomes_project 12 30960626 31001132 - 4933406C10Rik lincRNA lincRNA MGP_129S1SvImJ_T0006425.1 MGP_129S1SvImJ_G0005355.1 mouse_genomes_project 12 30966192 31001126 - 4933406C10Rik lincRNA lincRNA MGP_129S1SvImJ_T0012844.1 MGP_129S1SvImJ_G0010933.1 mouse_genomes_project 12 93101152 93102345 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003413.1 MGP_129S1SvImJ_G0003135.1 mouse_genomes_project 12 52946784 52964137 - 1700060O08Rik antisense antisense MGP_129S1SvImJ_T0034412.1 MGP_129S1SvImJ_G0019582.1 mouse_genomes_project 12 5238033 5319796 + MGP_129S1SvImJ_P0034412 Ldah protein_coding protein_coding MGP_129S1SvImJ_T0006482.1 MGP_129S1SvImJ_G0005403.1 mouse_genomes_project 12 109202963 109206143 + Gm2800 lincRNA lincRNA MGP_129S1SvImJ_T0102176.1 MGP_129S1SvImJ_G0040010.1 mouse_genomes_project 12 105598840 105612985 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0009803.1 MGP_129S1SvImJ_G0007919.1 mouse_genomes_project 12 35264181 35264282 - Gm44326 miRNA miRNA MGP_129S1SvImJ_T0034637.1 MGP_129S1SvImJ_G0019662.1 mouse_genomes_project 12 29477160 29518997 - MGP_129S1SvImJ_P0034637 Slc26a4 protein_coding protein_coding MGP_129S1SvImJ_T0034607.1 MGP_129S1SvImJ_G0019653.1 mouse_genomes_project 12 28802748 28812418 + MGP_129S1SvImJ_P0034607 Fam150b protein_coding protein_coding MGP_129S1SvImJ_T0034803.1 MGP_129S1SvImJ_G0019727.1 mouse_genomes_project 12 50555743 50645541 - MGP_129S1SvImJ_P0034803 Hectd1 protein_coding protein_coding MGP_129S1SvImJ_T0034804.1 MGP_129S1SvImJ_G0019727.1 mouse_genomes_project 12 50555743 50645541 - MGP_129S1SvImJ_P0034804 Hectd1 protein_coding protein_coding MGP_129S1SvImJ_T0035013.1 MGP_129S1SvImJ_G0019808.1 mouse_genomes_project 12 69922126 69969025 - MGP_129S1SvImJ_P0035013 Pygl protein_coding protein_coding MGP_129S1SvImJ_T0035014.1 MGP_129S1SvImJ_G0019808.1 mouse_genomes_project 12 69928730 69929173 - Pygl protein_coding processed_transcript MGP_129S1SvImJ_T0035015.1 MGP_129S1SvImJ_G0019808.1 mouse_genomes_project 12 69947608 69969054 - Pygl protein_coding retained_intron MGP_129S1SvImJ_T0035016.1 MGP_129S1SvImJ_G0019808.1 mouse_genomes_project 12 69951103 69968787 - Pygl protein_coding processed_transcript MGP_129S1SvImJ_T0035322.1 MGP_129S1SvImJ_G0019915.1 mouse_genomes_project 12 84277967 84322816 + MGP_129S1SvImJ_P0035322 Rbm25 protein_coding protein_coding MGP_129S1SvImJ_T0035323.1 MGP_129S1SvImJ_G0019915.1 mouse_genomes_project 12 84278013 84294353 + MGP_129S1SvImJ_P0035323 Rbm25 protein_coding protein_coding MGP_129S1SvImJ_T0035324.1 MGP_129S1SvImJ_G0019915.1 mouse_genomes_project 12 84278926 84331501 + MGP_129S1SvImJ_P0035324 Rbm25 protein_coding protein_coding MGP_129S1SvImJ_T0035325.1 MGP_129S1SvImJ_G0019915.1 mouse_genomes_project 12 84278927 84299755 + MGP_129S1SvImJ_P0035325 Rbm25 protein_coding protein_coding MGP_129S1SvImJ_T0035326.1 MGP_129S1SvImJ_G0019915.1 mouse_genomes_project 12 84278931 84294351 + MGP_129S1SvImJ_P0035326 Rbm25 protein_coding protein_coding MGP_129S1SvImJ_T0035327.1 MGP_129S1SvImJ_G0019915.1 mouse_genomes_project 12 84278965 84307863 + MGP_129S1SvImJ_P0035327 Rbm25 protein_coding protein_coding MGP_129S1SvImJ_T0035328.1 MGP_129S1SvImJ_G0019915.1 mouse_genomes_project 12 84278980 84290819 + MGP_129S1SvImJ_P0035328 Rbm25 protein_coding protein_coding MGP_129S1SvImJ_T0035329.1 MGP_129S1SvImJ_G0019915.1 mouse_genomes_project 12 84279000 84312398 + MGP_129S1SvImJ_P0035329 Rbm25 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035330.1 MGP_129S1SvImJ_G0019915.1 mouse_genomes_project 12 84282250 84286870 + Rbm25 protein_coding retained_intron MGP_129S1SvImJ_T0035331.1 MGP_129S1SvImJ_G0019915.1 mouse_genomes_project 12 84290674 84299774 + Rbm25 protein_coding retained_intron MGP_129S1SvImJ_T0035332.1 MGP_129S1SvImJ_G0019915.1 mouse_genomes_project 12 84290759 84330398 + MGP_129S1SvImJ_P0035332 Rbm25 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035333.1 MGP_129S1SvImJ_G0019915.1 mouse_genomes_project 12 84290819 84316882 + Rbm25 protein_coding retained_intron MGP_129S1SvImJ_T0035334.1 MGP_129S1SvImJ_G0019915.1 mouse_genomes_project 12 84294302 84300134 + Rbm25 protein_coding processed_transcript MGP_129S1SvImJ_T0035335.1 MGP_129S1SvImJ_G0019915.1 mouse_genomes_project 12 84296355 84300491 + Rbm25 protein_coding retained_intron MGP_129S1SvImJ_T0035336.1 MGP_129S1SvImJ_G0019915.1 mouse_genomes_project 12 84306923 84307983 + Rbm25 protein_coding retained_intron MGP_129S1SvImJ_T0035337.1 MGP_129S1SvImJ_G0019915.1 mouse_genomes_project 12 84311374 84312398 + Rbm25 protein_coding processed_transcript MGP_129S1SvImJ_T0035338.1 MGP_129S1SvImJ_G0019915.1 mouse_genomes_project 12 84322923 84324510 + Rbm25 protein_coding processed_transcript MGP_129S1SvImJ_T0035339.1 MGP_129S1SvImJ_G0019915.1 mouse_genomes_project 12 84323251 84326297 + Rbm25 protein_coding retained_intron MGP_129S1SvImJ_T0009827.1 MGP_129S1SvImJ_G0007943.1 mouse_genomes_project 12 90328816 90328958 - Gm27313 miRNA miRNA MGP_129S1SvImJ_T0035340.1 MGP_129S1SvImJ_G0019916.1 mouse_genomes_project 12 84336583 84386382 + MGP_129S1SvImJ_P0035340 Psen1 protein_coding protein_coding MGP_129S1SvImJ_T0035341.1 MGP_129S1SvImJ_G0019916.1 mouse_genomes_project 12 84336943 84387468 + MGP_129S1SvImJ_P0035341 Psen1 protein_coding protein_coding MGP_129S1SvImJ_T0035460.1 MGP_129S1SvImJ_G0019952.1 mouse_genomes_project 12 85867082 85893064 + MGP_129S1SvImJ_P0035460 Dlst protein_coding protein_coding MGP_129S1SvImJ_T0034390.1 MGP_129S1SvImJ_G0019574.1 mouse_genomes_project 12 1728898 1738895 + MGP_129S1SvImJ_P0034390 Sf3b6 protein_coding protein_coding MGP_129S1SvImJ_T0035026.1 MGP_129S1SvImJ_G0019812.1 mouse_genomes_project 12 70709310 70742986 + MGP_129S1SvImJ_P0035026 Actr10 protein_coding protein_coding MGP_129S1SvImJ_T0009845.1 MGP_129S1SvImJ_G0007961.1 mouse_genomes_project 12 111814381 111814478 + Mir337 miRNA miRNA MGP_129S1SvImJ_T0036106.1 MGP_129S1SvImJ_G0020165.1 mouse_genomes_project 12 115417534 115425190 - MGP_129S1SvImJ_P0036106 Nudt14 protein_coding protein_coding MGP_129S1SvImJ_T0012839.1 MGP_129S1SvImJ_G0010928.1 mouse_genomes_project 12 84953926 84954568 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003442.1 MGP_129S1SvImJ_G0003159.1 mouse_genomes_project 12 104249401 104255236 + Gm20069 antisense antisense MGP_129S1SvImJ_T0000007.1 MGP_129S1SvImJ_G0000005.1 mouse_genomes_project 12 115822113 115823632 - MGP_129S1SvImJ_P0000007 Ighg2c IG_C_gene IG_C_gene MGP_129S1SvImJ_T0035934.1 MGP_129S1SvImJ_G0020111.1 mouse_genomes_project 12 111020752 111054837 - MGP_129S1SvImJ_P0035934 Wars protein_coding protein_coding MGP_129S1SvImJ_T0035935.1 MGP_129S1SvImJ_G0020111.1 mouse_genomes_project 12 111020752 111055813 - MGP_129S1SvImJ_P0035935 Wars protein_coding protein_coding MGP_129S1SvImJ_T0035936.1 MGP_129S1SvImJ_G0020111.1 mouse_genomes_project 12 111020752 111055776 - MGP_129S1SvImJ_P0035936 Wars protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035937.1 MGP_129S1SvImJ_G0020111.1 mouse_genomes_project 12 111020756 111054836 - MGP_129S1SvImJ_P0035937 Wars protein_coding protein_coding MGP_129S1SvImJ_T0035938.1 MGP_129S1SvImJ_G0020111.1 mouse_genomes_project 12 111026560 111036928 - Wars protein_coding retained_intron MGP_129S1SvImJ_T0035939.1 MGP_129S1SvImJ_G0020111.1 mouse_genomes_project 12 111036760 111055740 - MGP_129S1SvImJ_P0035939 Wars protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035940.1 MGP_129S1SvImJ_G0020111.1 mouse_genomes_project 12 111042402 111050064 - Wars protein_coding retained_intron MGP_129S1SvImJ_T0035389.1 MGP_129S1SvImJ_G0019932.1 mouse_genomes_project 12 85017993 85045817 + MGP_129S1SvImJ_P0035389 Zfp410 protein_coding protein_coding MGP_129S1SvImJ_T0099328.1 MGP_129S1SvImJ_G0037395.1 mouse_genomes_project 12 76534125 76534199 - Gm25563 snRNA snRNA MGP_129S1SvImJ_T0035530.1 MGP_129S1SvImJ_G0019974.1 mouse_genomes_project 12 87824665 87841215 + MGP_129S1SvImJ_P0035530 Cipc protein_coding protein_coding MGP_129S1SvImJ_T0035531.1 MGP_129S1SvImJ_G0019974.1 mouse_genomes_project 12 87824665 87842355 + MGP_129S1SvImJ_P0035531 Cipc protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035532.1 MGP_129S1SvImJ_G0019974.1 mouse_genomes_project 12 87824721 87840515 + MGP_129S1SvImJ_P0035532 Cipc protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035533.1 MGP_129S1SvImJ_G0019974.1 mouse_genomes_project 12 87824965 87843910 + MGP_129S1SvImJ_P0035533 Cipc protein_coding protein_coding MGP_129S1SvImJ_T0035534.1 MGP_129S1SvImJ_G0019974.1 mouse_genomes_project 12 87825018 87830788 + Cipc protein_coding retained_intron MGP_129S1SvImJ_T0035535.1 MGP_129S1SvImJ_G0019974.1 mouse_genomes_project 12 87825040 87838939 + MGP_129S1SvImJ_P0035535 Cipc protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035536.1 MGP_129S1SvImJ_G0019974.1 mouse_genomes_project 12 87825076 87838938 + MGP_129S1SvImJ_P0035536 Cipc protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035537.1 MGP_129S1SvImJ_G0019974.1 mouse_genomes_project 12 87825088 87838855 + MGP_129S1SvImJ_P0035537 Cipc protein_coding protein_coding MGP_129S1SvImJ_T0035538.1 MGP_129S1SvImJ_G0019974.1 mouse_genomes_project 12 87825112 87840431 + MGP_129S1SvImJ_P0035538 Cipc protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0035539.1 MGP_129S1SvImJ_G0019974.1 mouse_genomes_project 12 87830279 87841381 + MGP_129S1SvImJ_P0035539 Cipc protein_coding protein_coding MGP_129S1SvImJ_T0100585.1 MGP_129S1SvImJ_G0038652.1 mouse_genomes_project 12 83334154 83334290 - Gm22149 snoRNA snoRNA MGP_129S1SvImJ_T0012863.1 MGP_129S1SvImJ_G0010952.1 mouse_genomes_project 12 115954195 115954649 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006403.1 MGP_129S1SvImJ_G0005338.1 mouse_genomes_project 12 132905 148305 - Gm26520 lincRNA lincRNA MGP_129S1SvImJ_T0006407.1 MGP_129S1SvImJ_G0005341.1 mouse_genomes_project 12 5834893 5841192 - Gm4755 lincRNA lincRNA MGP_129S1SvImJ_T0100578.1 MGP_129S1SvImJ_G0038645.1 mouse_genomes_project 12 65059642 65059774 + Gm22782 snoRNA snoRNA MGP_129S1SvImJ_T0035200.1 MGP_129S1SvImJ_G0019875.1 mouse_genomes_project 12 79164839 79184957 - MGP_129S1SvImJ_P0035200 Plek2 protein_coding protein_coding MGP_129S1SvImJ_T0009894.1 MGP_129S1SvImJ_G0008010.1 mouse_genomes_project 12 111978377 111978443 + Mir668 miRNA miRNA MGP_129S1SvImJ_T0036835.1 MGP_129S1SvImJ_G0020492.1 mouse_genomes_project 13 40268409 40361045 - MGP_129S1SvImJ_P0036835 Adtrp protein_coding protein_coding MGP_129S1SvImJ_T0036836.1 MGP_129S1SvImJ_G0020492.1 mouse_genomes_project 13 40269394 40361241 - MGP_129S1SvImJ_P0036836 Adtrp protein_coding protein_coding MGP_129S1SvImJ_T0036837.1 MGP_129S1SvImJ_G0020492.1 mouse_genomes_project 13 40269851 40361173 - MGP_129S1SvImJ_P0036837 Adtrp protein_coding protein_coding MGP_129S1SvImJ_T0036838.1 MGP_129S1SvImJ_G0020492.1 mouse_genomes_project 13 40282774 40337943 - MGP_129S1SvImJ_P0036838 Adtrp protein_coding protein_coding MGP_129S1SvImJ_T0038157.1 MGP_129S1SvImJ_G0020929.1 mouse_genomes_project 13 112755304 112759850 - MGP_129S1SvImJ_P0038157 Gapt protein_coding protein_coding MGP_129S1SvImJ_T0036402.1 MGP_129S1SvImJ_G0020269.1 mouse_genomes_project 13 18423507 18424479 + Trim27 protein_coding processed_transcript MGP_129S1SvImJ_T0036403.1 MGP_129S1SvImJ_G0020269.1 mouse_genomes_project 13 18424275 18438586 + MGP_129S1SvImJ_P0036403 Trim27 protein_coding protein_coding MGP_129S1SvImJ_T0036404.1 MGP_129S1SvImJ_G0020269.1 mouse_genomes_project 13 18433936 18434496 + Trim27 protein_coding retained_intron MGP_129S1SvImJ_T0036405.1 MGP_129S1SvImJ_G0020269.1 mouse_genomes_project 13 18434167 18436545 + MGP_129S1SvImJ_P0036405 Trim27 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0012929.1 MGP_129S1SvImJ_G0011018.1 mouse_genomes_project 13 39498908 39504321 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036979.1 MGP_129S1SvImJ_G0020542.1 mouse_genomes_project 13 48665371 48712692 + MGP_129S1SvImJ_P0036979 Iars protein_coding protein_coding MGP_129S1SvImJ_T0036980.1 MGP_129S1SvImJ_G0020542.1 mouse_genomes_project 13 48665401 48712692 + MGP_129S1SvImJ_P0036980 Iars protein_coding protein_coding MGP_129S1SvImJ_T0036981.1 MGP_129S1SvImJ_G0020542.1 mouse_genomes_project 13 48665462 48671627 + MGP_129S1SvImJ_P0036981 Iars protein_coding protein_coding MGP_129S1SvImJ_T0036982.1 MGP_129S1SvImJ_G0020542.1 mouse_genomes_project 13 48670706 48712166 + MGP_129S1SvImJ_P0036982 Iars protein_coding protein_coding MGP_129S1SvImJ_T0036983.1 MGP_129S1SvImJ_G0020542.1 mouse_genomes_project 13 48682899 48688913 + MGP_129S1SvImJ_P0036983 Iars protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036984.1 MGP_129S1SvImJ_G0020542.1 mouse_genomes_project 13 48683650 48692914 + Iars protein_coding retained_intron MGP_129S1SvImJ_T0036985.1 MGP_129S1SvImJ_G0020542.1 mouse_genomes_project 13 48685309 48692288 + Iars protein_coding retained_intron MGP_129S1SvImJ_T0036986.1 MGP_129S1SvImJ_G0020542.1 mouse_genomes_project 13 48694987 48700300 + Iars protein_coding retained_intron MGP_129S1SvImJ_T0036987.1 MGP_129S1SvImJ_G0020542.1 mouse_genomes_project 13 48699250 48700228 + Iars protein_coding retained_intron MGP_129S1SvImJ_T0036212.1 MGP_129S1SvImJ_G0020207.1 mouse_genomes_project 13 918215 942011 + MGP_129S1SvImJ_P0036212 Akr1c6 protein_coding protein_coding MGP_129S1SvImJ_T0036213.1 MGP_129S1SvImJ_G0020207.1 mouse_genomes_project 13 918341 918956 + Akr1c6 protein_coding processed_transcript MGP_129S1SvImJ_T0036214.1 MGP_129S1SvImJ_G0020207.1 mouse_genomes_project 13 920055 932181 + MGP_129S1SvImJ_P0036214 Akr1c6 protein_coding protein_coding MGP_129S1SvImJ_T0036803.1 MGP_129S1SvImJ_G0020475.1 mouse_genomes_project 13 37010960 37025536 - MGP_129S1SvImJ_P0036803 Eef1e1 protein_coding protein_coding MGP_129S1SvImJ_T0000915.1 MGP_129S1SvImJ_G0000847.1 mouse_genomes_project 13 91452391 91454130 + TEC TEC MGP_129S1SvImJ_T0100639.1 MGP_129S1SvImJ_G0038706.1 mouse_genomes_project 13 56507999 56508128 - Gm22777 snoRNA snoRNA MGP_129S1SvImJ_T0036548.1 MGP_129S1SvImJ_G0020371.1 mouse_genomes_project 13 21316264 21323255 + MGP_129S1SvImJ_P0036548 Slc17a1 protein_coding protein_coding MGP_129S1SvImJ_T0036549.1 MGP_129S1SvImJ_G0020371.1 mouse_genomes_project 13 21316521 21343639 + MGP_129S1SvImJ_P0036549 Slc17a1 protein_coding protein_coding MGP_129S1SvImJ_T0036550.1 MGP_129S1SvImJ_G0020371.1 mouse_genomes_project 13 21318809 21325068 + Slc17a1 protein_coding processed_transcript MGP_129S1SvImJ_T0036478.1 MGP_129S1SvImJ_G0020314.1 mouse_genomes_project 13 19579232 19580123 + MGP_129S1SvImJ_P0036478 Vmn1r194 protein_coding protein_coding MGP_129S1SvImJ_T0038190.1 MGP_129S1SvImJ_G0020939.1 mouse_genomes_project 13 115226288 115309925 + MGP_129S1SvImJ_P0038190 Slc38a9 protein_coding protein_coding MGP_129S1SvImJ_T0036693.1 MGP_129S1SvImJ_G0020430.1 mouse_genomes_project 13 30969947 30983806 + MGP_129S1SvImJ_P0036693 Serpinb6b protein_coding protein_coding MGP_129S1SvImJ_T0036694.1 MGP_129S1SvImJ_G0020430.1 mouse_genomes_project 13 30970182 30983801 + MGP_129S1SvImJ_P0036694 Serpinb6b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036695.1 MGP_129S1SvImJ_G0020430.1 mouse_genomes_project 13 30970241 30983801 + Serpinb6b protein_coding processed_transcript MGP_129S1SvImJ_T0036676.1 MGP_129S1SvImJ_G0020421.1 mouse_genomes_project 13 29481852 29484505 + MGP_129S1SvImJ_P0036676 Foxq1 protein_coding protein_coding MGP_129S1SvImJ_T0037959.1 MGP_129S1SvImJ_G0020875.1 mouse_genomes_project 13 101127387 101202299 + MGP_129S1SvImJ_P0037959 Mrps27 protein_coding protein_coding MGP_129S1SvImJ_T0037835.1 MGP_129S1SvImJ_G0020828.1 mouse_genomes_project 13 95034000 95120440 + MGP_129S1SvImJ_P0037835 Dmgdh protein_coding protein_coding MGP_129S1SvImJ_T0037836.1 MGP_129S1SvImJ_G0020828.1 mouse_genomes_project 13 95072862 95073484 + Dmgdh protein_coding processed_transcript MGP_129S1SvImJ_T0038012.1 MGP_129S1SvImJ_G0020893.1 mouse_genomes_project 13 102670093 102678248 - MGP_129S1SvImJ_P0038012 Mrps36 protein_coding protein_coding MGP_129S1SvImJ_T0038013.1 MGP_129S1SvImJ_G0020893.1 mouse_genomes_project 13 102670215 102678246 - MGP_129S1SvImJ_P0038013 Mrps36 protein_coding protein_coding MGP_129S1SvImJ_T0038014.1 MGP_129S1SvImJ_G0020893.1 mouse_genomes_project 13 102670267 102677720 - Mrps36 protein_coding processed_transcript MGP_129S1SvImJ_T0038015.1 MGP_129S1SvImJ_G0020893.1 mouse_genomes_project 13 102670290 102678177 - Mrps36 protein_coding processed_transcript MGP_129S1SvImJ_T0038016.1 MGP_129S1SvImJ_G0020893.1 mouse_genomes_project 13 102670318 102677703 - Mrps36 protein_coding processed_transcript MGP_129S1SvImJ_T0038017.1 MGP_129S1SvImJ_G0020893.1 mouse_genomes_project 13 102676994 102677702 - Mrps36 protein_coding processed_transcript MGP_129S1SvImJ_T0037876.1 MGP_129S1SvImJ_G0020841.1 mouse_genomes_project 13 96957228 96958592 - MGP_129S1SvImJ_P0037876 S100z protein_coding protein_coding MGP_129S1SvImJ_T0037342.1 MGP_129S1SvImJ_G0020641.1 mouse_genomes_project 13 59423461 59431559 + MGP_129S1SvImJ_P0037342 Spata31d1b protein_coding protein_coding MGP_129S1SvImJ_T0012934.1 MGP_129S1SvImJ_G0011023.1 mouse_genomes_project 13 60553050 60553416 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100659.1 MGP_129S1SvImJ_G0038726.1 mouse_genomes_project 13 121001107 121001237 + Gm26349 snoRNA snoRNA MGP_129S1SvImJ_T0037004.1 MGP_129S1SvImJ_G0020547.1 mouse_genomes_project 13 50279172 50329545 + MGP_129S1SvImJ_P0037004 Spin1 protein_coding protein_coding MGP_129S1SvImJ_T0037492.1 MGP_129S1SvImJ_G0020712.1 mouse_genomes_project 13 67618097 67634519 - MGP_129S1SvImJ_P0037492 protein_coding protein_coding MGP_129S1SvImJ_T0038176.1 MGP_129S1SvImJ_G0020935.1 mouse_genomes_project 13 114830394 114931329 + MGP_129S1SvImJ_P0038176 Ankrd55 protein_coding protein_coding MGP_129S1SvImJ_T0038177.1 MGP_129S1SvImJ_G0020935.1 mouse_genomes_project 13 114830394 114887532 + MGP_129S1SvImJ_P0038177 Ankrd55 protein_coding protein_coding MGP_129S1SvImJ_T0038178.1 MGP_129S1SvImJ_G0020935.1 mouse_genomes_project 13 114830394 114931331 + MGP_129S1SvImJ_P0038178 Ankrd55 protein_coding protein_coding MGP_129S1SvImJ_T0038179.1 MGP_129S1SvImJ_G0020935.1 mouse_genomes_project 13 114830461 114901199 + MGP_129S1SvImJ_P0038179 Ankrd55 protein_coding protein_coding MGP_129S1SvImJ_T0036444.1 MGP_129S1SvImJ_G0020291.1 mouse_genomes_project 13 18989658 18990265 - MGP_129S1SvImJ_P0036444 Hist1h2bn protein_coding protein_coding MGP_129S1SvImJ_T0036631.1 MGP_129S1SvImJ_G0020399.1 mouse_genomes_project 13 25134146 25142629 - MGP_129S1SvImJ_P0036631 Prl8a8 protein_coding protein_coding MGP_129S1SvImJ_T0036632.1 MGP_129S1SvImJ_G0020399.1 mouse_genomes_project 13 25134250 25142627 - MGP_129S1SvImJ_P0036632 Prl8a8 protein_coding protein_coding MGP_129S1SvImJ_T0037594.1 MGP_129S1SvImJ_G0020763.1 mouse_genomes_project 13 74822768 74851111 - MGP_129S1SvImJ_P0037594 Sdha protein_coding protein_coding MGP_129S1SvImJ_T0037595.1 MGP_129S1SvImJ_G0020763.1 mouse_genomes_project 13 74823246 74824769 - Sdha protein_coding retained_intron MGP_129S1SvImJ_T0037596.1 MGP_129S1SvImJ_G0020763.1 mouse_genomes_project 13 74828459 74829636 - Sdha protein_coding retained_intron MGP_129S1SvImJ_T0037597.1 MGP_129S1SvImJ_G0020763.1 mouse_genomes_project 13 74838661 74851033 - Sdha protein_coding processed_transcript MGP_129S1SvImJ_T0037598.1 MGP_129S1SvImJ_G0020763.1 mouse_genomes_project 13 74840194 74840957 - Sdha protein_coding retained_intron MGP_129S1SvImJ_T0037599.1 MGP_129S1SvImJ_G0020763.1 mouse_genomes_project 13 74844436 74851070 - Sdha protein_coding retained_intron MGP_129S1SvImJ_T0037600.1 MGP_129S1SvImJ_G0020763.1 mouse_genomes_project 13 74845904 74850988 - Sdha protein_coding processed_transcript MGP_129S1SvImJ_T0037601.1 MGP_129S1SvImJ_G0020763.1 mouse_genomes_project 13 74845943 74851066 - Sdha protein_coding processed_transcript MGP_129S1SvImJ_T0036298.1 MGP_129S1SvImJ_G0020226.1 mouse_genomes_project 13 6528199 7037780 - MGP_129S1SvImJ_P0036298 Chrm3 protein_coding protein_coding MGP_129S1SvImJ_T0036299.1 MGP_129S1SvImJ_G0020226.1 mouse_genomes_project 13 6529942 6531712 - MGP_129S1SvImJ_P0036299 Chrm3 protein_coding protein_coding MGP_129S1SvImJ_T0036300.1 MGP_129S1SvImJ_G0020226.1 mouse_genomes_project 13 6885339 7037500 - Chrm3 protein_coding processed_transcript MGP_129S1SvImJ_T0006626.1 MGP_129S1SvImJ_G0005491.1 mouse_genomes_project 13 95332219 95334245 - Gm26527 lincRNA lincRNA MGP_129S1SvImJ_T0036959.1 MGP_129S1SvImJ_G0020532.1 mouse_genomes_project 13 48195452 48214289 - MGP_129S1SvImJ_P0036959 Susd3 protein_coding protein_coding MGP_129S1SvImJ_T0036960.1 MGP_129S1SvImJ_G0020532.1 mouse_genomes_project 13 48195591 48214701 - MGP_129S1SvImJ_P0036960 Susd3 protein_coding protein_coding MGP_129S1SvImJ_T0036961.1 MGP_129S1SvImJ_G0020532.1 mouse_genomes_project 13 48196065 48214658 - MGP_129S1SvImJ_P0036961 Susd3 protein_coding protein_coding MGP_129S1SvImJ_T0036962.1 MGP_129S1SvImJ_G0020532.1 mouse_genomes_project 13 48203625 48206559 - Susd3 protein_coding processed_transcript MGP_129S1SvImJ_T0036963.1 MGP_129S1SvImJ_G0020532.1 mouse_genomes_project 13 48203927 48214149 - MGP_129S1SvImJ_P0036963 Susd3 protein_coding protein_coding MGP_129S1SvImJ_T0036964.1 MGP_129S1SvImJ_G0020532.1 mouse_genomes_project 13 48204844 48208841 - Susd3 protein_coding processed_transcript MGP_129S1SvImJ_T0037654.1 MGP_129S1SvImJ_G0020785.1 mouse_genomes_project 13 81614970 81621240 + Arrdc3 protein_coding retained_intron MGP_129S1SvImJ_T0037655.1 MGP_129S1SvImJ_G0020785.1 mouse_genomes_project 13 81614996 81627634 + MGP_129S1SvImJ_P0037655 Arrdc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037656.1 MGP_129S1SvImJ_G0020785.1 mouse_genomes_project 13 81615238 81627632 + MGP_129S1SvImJ_P0037656 Arrdc3 protein_coding protein_coding MGP_129S1SvImJ_T0037657.1 MGP_129S1SvImJ_G0020785.1 mouse_genomes_project 13 81621700 81622849 + Arrdc3 protein_coding retained_intron MGP_129S1SvImJ_T0037658.1 MGP_129S1SvImJ_G0020785.1 mouse_genomes_project 13 81622114 81623239 + Arrdc3 protein_coding retained_intron MGP_129S1SvImJ_T0102229.1 MGP_129S1SvImJ_G0040063.1 mouse_genomes_project 13 31916821 31917745 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102220.1 MGP_129S1SvImJ_G0040054.1 mouse_genomes_project 13 31168816 31265361 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0037431.1 MGP_129S1SvImJ_G0020681.1 mouse_genomes_project 13 64764510 64928145 - MGP_129S1SvImJ_P0037431 Cntnap3 protein_coding protein_coding MGP_129S1SvImJ_T0036841.1 MGP_129S1SvImJ_G0020495.1 mouse_genomes_project 13 41227942 41719298 + MGP_129S1SvImJ_P0036841 Phactr1 protein_coding protein_coding MGP_129S1SvImJ_T0036842.1 MGP_129S1SvImJ_G0020495.1 mouse_genomes_project 13 41228118 41519933 + Phactr1 protein_coding retained_intron MGP_129S1SvImJ_T0036843.1 MGP_129S1SvImJ_G0020495.1 mouse_genomes_project 13 41228832 41716014 + MGP_129S1SvImJ_P0036843 Phactr1 protein_coding protein_coding MGP_129S1SvImJ_T0036844.1 MGP_129S1SvImJ_G0020495.1 mouse_genomes_project 13 41230017 41715958 + MGP_129S1SvImJ_P0036844 Phactr1 protein_coding protein_coding MGP_129S1SvImJ_T0036845.1 MGP_129S1SvImJ_G0020495.1 mouse_genomes_project 13 41256455 41716170 + MGP_129S1SvImJ_P0036845 Phactr1 protein_coding protein_coding MGP_129S1SvImJ_T0036846.1 MGP_129S1SvImJ_G0020495.1 mouse_genomes_project 13 41256493 41719300 + MGP_129S1SvImJ_P0036846 Phactr1 protein_coding protein_coding MGP_129S1SvImJ_T0036847.1 MGP_129S1SvImJ_G0020495.1 mouse_genomes_project 13 41421930 41716073 + MGP_129S1SvImJ_P0036847 Phactr1 protein_coding protein_coding MGP_129S1SvImJ_T0036848.1 MGP_129S1SvImJ_G0020495.1 mouse_genomes_project 13 41423541 41517679 + Phactr1 protein_coding processed_transcript MGP_129S1SvImJ_T0036849.1 MGP_129S1SvImJ_G0020495.1 mouse_genomes_project 13 41690039 41716152 + Phactr1 protein_coding processed_transcript MGP_129S1SvImJ_T0036850.1 MGP_129S1SvImJ_G0020495.1 mouse_genomes_project 13 41700687 41716180 + Phactr1 protein_coding processed_transcript MGP_129S1SvImJ_T0036851.1 MGP_129S1SvImJ_G0020495.1 mouse_genomes_project 13 41700702 41716128 + Phactr1 protein_coding processed_transcript MGP_129S1SvImJ_T0036852.1 MGP_129S1SvImJ_G0020495.1 mouse_genomes_project 13 41703682 41716018 + Phactr1 protein_coding processed_transcript MGP_129S1SvImJ_T0036853.1 MGP_129S1SvImJ_G0020495.1 mouse_genomes_project 13 41703682 41716018 + Phactr1 protein_coding processed_transcript MGP_129S1SvImJ_T0036854.1 MGP_129S1SvImJ_G0020495.1 mouse_genomes_project 13 41703714 41716018 + Phactr1 protein_coding processed_transcript MGP_129S1SvImJ_T0036855.1 MGP_129S1SvImJ_G0020495.1 mouse_genomes_project 13 41713772 41715016 + Phactr1 protein_coding processed_transcript MGP_129S1SvImJ_T0036856.1 MGP_129S1SvImJ_G0020495.1 mouse_genomes_project 13 41716152 41719286 + Phactr1 protein_coding processed_transcript MGP_129S1SvImJ_T0036553.1 MGP_129S1SvImJ_G0020373.1 mouse_genomes_project 13 21384435 21384819 - MGP_129S1SvImJ_P0036553 Hist1h2ba protein_coding protein_coding MGP_129S1SvImJ_T0012977.1 MGP_129S1SvImJ_G0011066.1 mouse_genomes_project 13 115474349 115475306 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036205.1 MGP_129S1SvImJ_G0020204.1 mouse_genomes_project 13 682133 689862 + MGP_129S1SvImJ_P0036205 Akr1c13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036206.1 MGP_129S1SvImJ_G0020204.1 mouse_genomes_project 13 682136 696519 + MGP_129S1SvImJ_P0036206 Akr1c13 protein_coding protein_coding MGP_129S1SvImJ_T0036207.1 MGP_129S1SvImJ_G0020204.1 mouse_genomes_project 13 682144 696525 + MGP_129S1SvImJ_P0036207 Akr1c13 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0102223.1 MGP_129S1SvImJ_G0040057.1 mouse_genomes_project 13 31769248 31769407 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0100654.1 MGP_129S1SvImJ_G0038721.1 mouse_genomes_project 13 96787980 96788118 + Snora47 snoRNA snoRNA MGP_129S1SvImJ_T0037873.1 MGP_129S1SvImJ_G0020839.1 mouse_genomes_project 13 96808041 96832711 - MGP_129S1SvImJ_P0037873 Aggf1 protein_coding protein_coding MGP_129S1SvImJ_T0037874.1 MGP_129S1SvImJ_G0020839.1 mouse_genomes_project 13 96810860 96832693 - Aggf1 protein_coding processed_transcript MGP_129S1SvImJ_T0036909.1 MGP_129S1SvImJ_G0020518.1 mouse_genomes_project 13 45830316 45850392 - MGP_129S1SvImJ_P0036909 Tpmt protein_coding protein_coding MGP_129S1SvImJ_T0036910.1 MGP_129S1SvImJ_G0020518.1 mouse_genomes_project 13 45830325 45850306 - MGP_129S1SvImJ_P0036910 Tpmt protein_coding protein_coding MGP_129S1SvImJ_T0036911.1 MGP_129S1SvImJ_G0020518.1 mouse_genomes_project 13 45830514 45851846 - MGP_129S1SvImJ_P0036911 Tpmt protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036912.1 MGP_129S1SvImJ_G0020518.1 mouse_genomes_project 13 45833781 45850525 - MGP_129S1SvImJ_P0036912 Tpmt protein_coding protein_coding MGP_129S1SvImJ_T0036913.1 MGP_129S1SvImJ_G0020518.1 mouse_genomes_project 13 45833800 45851919 - MGP_129S1SvImJ_P0036913 Tpmt protein_coding protein_coding MGP_129S1SvImJ_T0036914.1 MGP_129S1SvImJ_G0020518.1 mouse_genomes_project 13 45846887 45850326 - Tpmt protein_coding retained_intron MGP_129S1SvImJ_T0036915.1 MGP_129S1SvImJ_G0020518.1 mouse_genomes_project 13 45847297 45850320 - MGP_129S1SvImJ_P0036915 Tpmt protein_coding protein_coding MGP_129S1SvImJ_T0006605.1 MGP_129S1SvImJ_G0005477.1 mouse_genomes_project 13 69385752 69397344 + lincRNA lincRNA MGP_129S1SvImJ_T0036493.1 MGP_129S1SvImJ_G0020329.1 mouse_genomes_project 13 20227949 20228939 - MGP_129S1SvImJ_P0036493 Vmn1r211 protein_coding protein_coding MGP_129S1SvImJ_T0017395.1 MGP_129S1SvImJ_G0015260.1 mouse_genomes_project 13 90919556 91030027 + Gm4117 processed_transcript processed_transcript MGP_129S1SvImJ_T0017396.1 MGP_129S1SvImJ_G0015260.1 mouse_genomes_project 13 90919560 91074629 + Gm4117 processed_transcript processed_transcript MGP_129S1SvImJ_T0036887.1 MGP_129S1SvImJ_G0020508.1 mouse_genomes_project 13 44221596 44262425 + MGP_129S1SvImJ_P0036887 Gmpr protein_coding protein_coding MGP_129S1SvImJ_T0036888.1 MGP_129S1SvImJ_G0020508.1 mouse_genomes_project 13 44221809 44268158 + MGP_129S1SvImJ_P0036888 Gmpr protein_coding unknown_likely_coding MGP_129S1SvImJ_T0036889.1 MGP_129S1SvImJ_G0020508.1 mouse_genomes_project 13 44228011 44261941 + MGP_129S1SvImJ_P0036889 Gmpr protein_coding protein_coding MGP_129S1SvImJ_T0036890.1 MGP_129S1SvImJ_G0020508.1 mouse_genomes_project 13 44254854 44258593 + Gmpr protein_coding retained_intron MGP_129S1SvImJ_T0036516.1 MGP_129S1SvImJ_G0020346.1 mouse_genomes_project 13 20946706 20947381 + MGP_129S1SvImJ_P0036516 Hist1h3g protein_coding protein_coding MGP_129S1SvImJ_T0037543.1 MGP_129S1SvImJ_G0020740.1 mouse_genomes_project 13 73021974 73028926 + MGP_129S1SvImJ_P0037543 Irx2 protein_coding protein_coding MGP_129S1SvImJ_T0037544.1 MGP_129S1SvImJ_G0020740.1 mouse_genomes_project 13 73022125 73025453 + Irx2 protein_coding processed_transcript MGP_129S1SvImJ_T0037545.1 MGP_129S1SvImJ_G0020740.1 mouse_genomes_project 13 73024552 73025608 + MGP_129S1SvImJ_P0037545 Irx2 protein_coding protein_coding MGP_129S1SvImJ_T0037546.1 MGP_129S1SvImJ_G0020740.1 mouse_genomes_project 13 73026812 73028341 + Irx2 protein_coding retained_intron MGP_129S1SvImJ_T0037547.1 MGP_129S1SvImJ_G0020740.1 mouse_genomes_project 13 73027324 73028498 + MGP_129S1SvImJ_P0037547 Irx2 protein_coding protein_coding MGP_129S1SvImJ_T0036458.1 MGP_129S1SvImJ_G0020303.1 mouse_genomes_project 13 19129039 19131254 - MGP_129S1SvImJ_P0036458 Hist1h4m protein_coding protein_coding MGP_129S1SvImJ_T0036479.1 MGP_129S1SvImJ_G0020315.1 mouse_genomes_project 13 19607689 19608640 + MGP_129S1SvImJ_P0036479 Vmn1r195 protein_coding protein_coding MGP_129S1SvImJ_T0036861.1 MGP_129S1SvImJ_G0020499.1 mouse_genomes_project 13 41994226 41998693 + MGP_129S1SvImJ_P0036861 Nol7 protein_coding protein_coding MGP_129S1SvImJ_T0036621.1 MGP_129S1SvImJ_G0020394.1 mouse_genomes_project 13 24878091 24895835 + MGP_129S1SvImJ_P0036621 Prl3a1 protein_coding protein_coding MGP_129S1SvImJ_T0036978.1 MGP_129S1SvImJ_G0020541.1 mouse_genomes_project 13 48632665 48662300 + MGP_129S1SvImJ_P0036978 Nol8 protein_coding protein_coding MGP_129S1SvImJ_T0012907.1 MGP_129S1SvImJ_G0010996.1 mouse_genomes_project 13 23111558 23112674 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036413.1 MGP_129S1SvImJ_G0020274.1 mouse_genomes_project 13 18645212 18663801 - MGP_129S1SvImJ_P0036413 protein_coding protein_coding MGP_129S1SvImJ_T0036414.1 MGP_129S1SvImJ_G0020274.1 mouse_genomes_project 13 18645212 18663843 - MGP_129S1SvImJ_P0036414 protein_coding protein_coding MGP_129S1SvImJ_T0036415.1 MGP_129S1SvImJ_G0020274.1 mouse_genomes_project 13 18646803 18654825 - MGP_129S1SvImJ_P0036415 protein_coding protein_coding MGP_129S1SvImJ_T0036416.1 MGP_129S1SvImJ_G0020274.1 mouse_genomes_project 13 18647491 18663783 - MGP_129S1SvImJ_P0036416 protein_coding protein_coding MGP_129S1SvImJ_T0036417.1 MGP_129S1SvImJ_G0020274.1 mouse_genomes_project 13 18653293 18663804 - MGP_129S1SvImJ_P0036417 protein_coding protein_coding MGP_129S1SvImJ_T0036418.1 MGP_129S1SvImJ_G0020274.1 mouse_genomes_project 13 18662638 18663758 - protein_coding processed_transcript MGP_129S1SvImJ_T0036269.1 MGP_129S1SvImJ_G0020222.1 mouse_genomes_project 13 5595306 5619250 - MGP_129S1SvImJ_P0036269 Gtpbp4 protein_coding protein_coding MGP_129S1SvImJ_T0099359.1 MGP_129S1SvImJ_G0037426.1 mouse_genomes_project 13 38263845 38264010 - Gm23972 snRNA snRNA MGP_129S1SvImJ_T0037462.1 MGP_129S1SvImJ_G0020696.1 mouse_genomes_project 13 67170699 67183032 - MGP_129S1SvImJ_P0037462 protein_coding protein_coding MGP_129S1SvImJ_T0037466.1 MGP_129S1SvImJ_G0020696.1 mouse_genomes_project 13 67170702 67183065 - MGP_129S1SvImJ_P0037466 protein_coding protein_coding MGP_129S1SvImJ_T0036615.1 MGP_129S1SvImJ_G0020390.1 mouse_genomes_project 13 24655188 24663564 + MGP_129S1SvImJ_P0036615 Prl protein_coding protein_coding MGP_129S1SvImJ_T0036665.1 MGP_129S1SvImJ_G0020414.1 mouse_genomes_project 13 28400671 28406855 - MGP_129S1SvImJ_P0036665 Uqcrfs1 protein_coding protein_coding MGP_129S1SvImJ_T0000911.1 MGP_129S1SvImJ_G0000843.1 mouse_genomes_project 13 79938200 79938662 - TEC TEC MGP_129S1SvImJ_T0099369.1 MGP_129S1SvImJ_G0037436.1 mouse_genomes_project 13 62709815 62709922 + Gm25448 snRNA snRNA MGP_129S1SvImJ_T0036410.1 MGP_129S1SvImJ_G0020272.1 mouse_genomes_project 13 18601892 18602947 + MGP_129S1SvImJ_P0036410 Olfr1367 protein_coding protein_coding MGP_129S1SvImJ_T0037491.1 MGP_129S1SvImJ_G0020711.1 mouse_genomes_project 13 67571113 67598409 - MGP_129S1SvImJ_P0037491 protein_coding protein_coding MGP_129S1SvImJ_T0036338.1 MGP_129S1SvImJ_G0020241.1 mouse_genomes_project 13 11020777 11032541 - MGP_129S1SvImJ_P0036338 Ggps1 protein_coding protein_coding MGP_129S1SvImJ_T0102219.1 MGP_129S1SvImJ_G0040053.1 mouse_genomes_project 13 31123763 31126701 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102217.1 MGP_129S1SvImJ_G0040051.1 mouse_genomes_project 13 30866044 30869256 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0037588.1 MGP_129S1SvImJ_G0020760.1 mouse_genomes_project 13 74667356 74706999 - MGP_129S1SvImJ_P0037588 Exoc3 protein_coding protein_coding MGP_129S1SvImJ_T0102207.1 MGP_129S1SvImJ_G0040041.1 mouse_genomes_project 13 20444318 20445244 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002613.1 MGP_129S1SvImJ_G0002513.1 mouse_genomes_project 13 16302656 16303104 + MGP_129S1SvImJ_P0002613 Tcrg-V5 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002614.1 MGP_129S1SvImJ_G0002513.1 mouse_genomes_project 13 16302811 16303104 + MGP_129S1SvImJ_P0002614 Tcrg-V5 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0036411.1 MGP_129S1SvImJ_G0020273.1 mouse_genomes_project 13 18620146 18627140 + MGP_129S1SvImJ_P0036411 Zscan12 protein_coding protein_coding MGP_129S1SvImJ_T0036412.1 MGP_129S1SvImJ_G0020273.1 mouse_genomes_project 13 18620606 18627140 + MGP_129S1SvImJ_P0036412 Zscan12 protein_coding protein_coding MGP_129S1SvImJ_T0009929.1 MGP_129S1SvImJ_G0008045.1 mouse_genomes_project 13 14806467 14806588 + Mir466i miRNA miRNA MGP_129S1SvImJ_T0037585.1 MGP_129S1SvImJ_G0020758.1 mouse_genomes_project 13 74528904 74554695 - MGP_129S1SvImJ_P0037585 Cep72 protein_coding protein_coding MGP_129S1SvImJ_T0036927.1 MGP_129S1SvImJ_G0020521.1 mouse_genomes_project 13 45931975 46063353 + MGP_129S1SvImJ_P0036927 Rnf144b protein_coding protein_coding MGP_129S1SvImJ_T0036928.1 MGP_129S1SvImJ_G0020521.1 mouse_genomes_project 13 46007554 46063353 + MGP_129S1SvImJ_P0036928 Rnf144b protein_coding protein_coding MGP_129S1SvImJ_T0038090.1 MGP_129S1SvImJ_G0020911.1 mouse_genomes_project 13 106961077 106983024 - MGP_129S1SvImJ_P0038090 Fam159b protein_coding protein_coding MGP_129S1SvImJ_T0037300.1 MGP_129S1SvImJ_G0020636.1 mouse_genomes_project 13 58473189 58607845 + MGP_129S1SvImJ_P0037300 Ntrk2 protein_coding protein_coding MGP_129S1SvImJ_T0037301.1 MGP_129S1SvImJ_G0020636.1 mouse_genomes_project 13 58474493 58811609 + MGP_129S1SvImJ_P0037301 Ntrk2 protein_coding protein_coding MGP_129S1SvImJ_T0011377.1 MGP_129S1SvImJ_G0009493.1 mouse_genomes_project 13 56280861 56280986 + Gm27834 misc_RNA misc_RNA MGP_129S1SvImJ_T0000918.1 MGP_129S1SvImJ_G0000850.1 mouse_genomes_project 13 96042191 96042839 + TEC TEC MGP_129S1SvImJ_T0006599.1 MGP_129S1SvImJ_G0005473.1 mouse_genomes_project 13 59445988 59447537 + 4930528D03Rik lincRNA lincRNA MGP_129S1SvImJ_T0006600.1 MGP_129S1SvImJ_G0005473.1 mouse_genomes_project 13 59445993 59449797 + 4930528D03Rik lincRNA lincRNA MGP_129S1SvImJ_T0012930.1 MGP_129S1SvImJ_G0011019.1 mouse_genomes_project 13 43083503 43084483 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036308.1 MGP_129S1SvImJ_G0020230.1 mouse_genomes_project 13 9154602 9200152 + MGP_129S1SvImJ_P0036308 Heatr1 protein_coding protein_coding MGP_129S1SvImJ_T0037759.1 MGP_129S1SvImJ_G0020803.1 mouse_genomes_project 13 91803979 91804345 + MGP_129S1SvImJ_P0037759 Gm21726 protein_coding protein_coding MGP_129S1SvImJ_T0003474.1 MGP_129S1SvImJ_G0003185.1 mouse_genomes_project 13 41329496 41335374 - Gm15810 antisense antisense MGP_129S1SvImJ_T0037838.1 MGP_129S1SvImJ_G0020830.1 mouse_genomes_project 13 95453169 95600066 + MGP_129S1SvImJ_P0037838 Lhfpl2 protein_coding protein_coding MGP_129S1SvImJ_T0037839.1 MGP_129S1SvImJ_G0020830.1 mouse_genomes_project 13 95453205 95522702 + Lhfpl2 protein_coding retained_intron MGP_129S1SvImJ_T0037840.1 MGP_129S1SvImJ_G0020830.1 mouse_genomes_project 13 95482844 95578053 + MGP_129S1SvImJ_P0037840 Lhfpl2 protein_coding protein_coding MGP_129S1SvImJ_T0037841.1 MGP_129S1SvImJ_G0020830.1 mouse_genomes_project 13 95534718 95577739 + MGP_129S1SvImJ_P0037841 Lhfpl2 protein_coding protein_coding MGP_129S1SvImJ_T0037842.1 MGP_129S1SvImJ_G0020830.1 mouse_genomes_project 13 95576234 95599174 + MGP_129S1SvImJ_P0037842 Lhfpl2 protein_coding protein_coding MGP_129S1SvImJ_T0037843.1 MGP_129S1SvImJ_G0020830.1 mouse_genomes_project 13 95577198 95577626 + Lhfpl2 protein_coding processed_transcript MGP_129S1SvImJ_T0037844.1 MGP_129S1SvImJ_G0020830.1 mouse_genomes_project 13 95577404 95600066 + MGP_129S1SvImJ_P0037844 Lhfpl2 protein_coding protein_coding MGP_129S1SvImJ_T0098315.1 MGP_129S1SvImJ_G0036400.1 mouse_genomes_project 13 92474042 92474469 + pseudogene pseudogene MGP_129S1SvImJ_T0037624.1 MGP_129S1SvImJ_G0020776.1 mouse_genomes_project 13 76601662 76603818 - MGP_129S1SvImJ_P0037624 Gpr150 protein_coding protein_coding MGP_129S1SvImJ_T0036315.1 MGP_129S1SvImJ_G0020232.1 mouse_genomes_project 13 9235903 9286705 - MGP_129S1SvImJ_P0036315 Edaradd protein_coding protein_coding MGP_129S1SvImJ_T0017397.1 MGP_129S1SvImJ_G0015261.1 mouse_genomes_project 13 110621989 110625256 - Gm2822 processed_transcript processed_transcript MGP_129S1SvImJ_T0036941.1 MGP_129S1SvImJ_G0020528.1 mouse_genomes_project 13 47821166 47916882 - MGP_129S1SvImJ_P0036941 Fam120a protein_coding protein_coding MGP_129S1SvImJ_T0036622.1 MGP_129S1SvImJ_G0020395.1 mouse_genomes_project 13 24930723 24937349 + MGP_129S1SvImJ_P0036622 Prl6a1 protein_coding protein_coding MGP_129S1SvImJ_T0036623.1 MGP_129S1SvImJ_G0020395.1 mouse_genomes_project 13 24932042 24937349 + MGP_129S1SvImJ_P0036623 Prl6a1 protein_coding protein_coding MGP_129S1SvImJ_T0037743.1 MGP_129S1SvImJ_G0020800.1 mouse_genomes_project 13 90830658 90922606 - MGP_129S1SvImJ_P0037743 Vcan protein_coding protein_coding MGP_129S1SvImJ_T0037744.1 MGP_129S1SvImJ_G0020800.1 mouse_genomes_project 13 90831686 90922419 - MGP_129S1SvImJ_P0037744 Vcan protein_coding protein_coding MGP_129S1SvImJ_T0037745.1 MGP_129S1SvImJ_G0020800.1 mouse_genomes_project 13 90831991 90922431 - MGP_129S1SvImJ_P0037745 Vcan protein_coding protein_coding MGP_129S1SvImJ_T0037746.1 MGP_129S1SvImJ_G0020800.1 mouse_genomes_project 13 90832363 90855158 - MGP_129S1SvImJ_P0037746 Vcan protein_coding protein_coding MGP_129S1SvImJ_T0037747.1 MGP_129S1SvImJ_G0020800.1 mouse_genomes_project 13 90832402 90922341 - MGP_129S1SvImJ_P0037747 Vcan protein_coding protein_coding MGP_129S1SvImJ_T0037748.1 MGP_129S1SvImJ_G0020800.1 mouse_genomes_project 13 90833001 90855945 - MGP_129S1SvImJ_P0037748 Vcan protein_coding protein_coding MGP_129S1SvImJ_T0037749.1 MGP_129S1SvImJ_G0020800.1 mouse_genomes_project 13 90887711 90901571 - Vcan protein_coding retained_intron MGP_129S1SvImJ_T0037750.1 MGP_129S1SvImJ_G0020800.1 mouse_genomes_project 13 90888254 90922415 - MGP_129S1SvImJ_P0037750 Vcan protein_coding protein_coding MGP_129S1SvImJ_T0037751.1 MGP_129S1SvImJ_G0020800.1 mouse_genomes_project 13 90905032 90920494 - MGP_129S1SvImJ_P0037751 Vcan protein_coding protein_coding MGP_129S1SvImJ_T0099349.1 MGP_129S1SvImJ_G0037416.1 mouse_genomes_project 13 14871910 14872017 - Gm24018 snRNA snRNA MGP_129S1SvImJ_T0009979.1 MGP_129S1SvImJ_G0008095.1 mouse_genomes_project 13 110086795 110086967 - Gm22118 miRNA miRNA MGP_129S1SvImJ_T0036317.1 MGP_129S1SvImJ_G0020234.1 mouse_genomes_project 13 9525972 9526200 + MGP_129S1SvImJ_P0036317 Gm2399 protein_coding protein_coding MGP_129S1SvImJ_T0012939.1 MGP_129S1SvImJ_G0011028.1 mouse_genomes_project 13 65143323 65143527 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098309.1 MGP_129S1SvImJ_G0036394.1 mouse_genomes_project 13 331335 340398 + pseudogene pseudogene MGP_129S1SvImJ_T0037234.1 MGP_129S1SvImJ_G0020613.1 mouse_genomes_project 13 55596926 55660050 - MGP_129S1SvImJ_P0037234 H2afy protein_coding protein_coding MGP_129S1SvImJ_T0037235.1 MGP_129S1SvImJ_G0020613.1 mouse_genomes_project 13 55596926 55660050 - MGP_129S1SvImJ_P0037235 H2afy protein_coding protein_coding MGP_129S1SvImJ_T0037236.1 MGP_129S1SvImJ_G0020613.1 mouse_genomes_project 13 55597475 55607859 - H2afy protein_coding retained_intron MGP_129S1SvImJ_T0037237.1 MGP_129S1SvImJ_G0020613.1 mouse_genomes_project 13 55597668 55613408 - H2afy protein_coding retained_intron MGP_129S1SvImJ_T0037238.1 MGP_129S1SvImJ_G0020613.1 mouse_genomes_project 13 55618905 55659949 - H2afy protein_coding processed_transcript MGP_129S1SvImJ_T0037239.1 MGP_129S1SvImJ_G0020613.1 mouse_genomes_project 13 55624026 55659859 - H2afy protein_coding retained_intron MGP_129S1SvImJ_T0037240.1 MGP_129S1SvImJ_G0020613.1 mouse_genomes_project 13 55627567 55660780 - H2afy protein_coding processed_transcript MGP_129S1SvImJ_T0037241.1 MGP_129S1SvImJ_G0020613.1 mouse_genomes_project 13 55627578 55659244 - H2afy protein_coding processed_transcript MGP_129S1SvImJ_T0037439.1 MGP_129S1SvImJ_G0020686.1 mouse_genomes_project 13 65169372 65170320 + MGP_129S1SvImJ_P0037439 Olfr465-ps1 protein_coding protein_coding MGP_129S1SvImJ_T0036197.1 MGP_129S1SvImJ_G0020199.1 mouse_genomes_project 13 372881 384095 - MGP_129S1SvImJ_P0036197 Net1 protein_coding protein_coding MGP_129S1SvImJ_T0036198.1 MGP_129S1SvImJ_G0020199.1 mouse_genomes_project 13 372881 407333 - MGP_129S1SvImJ_P0036198 Net1 protein_coding protein_coding MGP_129S1SvImJ_T0011370.1 MGP_129S1SvImJ_G0009486.1 mouse_genomes_project 13 37278655 37278883 - Gm22035 misc_RNA misc_RNA MGP_129S1SvImJ_T0037052.1 MGP_129S1SvImJ_G0020560.1 mouse_genomes_project 13 52422826 52612298 - MGP_129S1SvImJ_P0037052 Ror2 protein_coding protein_coding MGP_129S1SvImJ_T0037053.1 MGP_129S1SvImJ_G0020560.1 mouse_genomes_project 13 52422831 52612873 - MGP_129S1SvImJ_P0037053 Ror2 protein_coding protein_coding MGP_129S1SvImJ_T0037054.1 MGP_129S1SvImJ_G0020560.1 mouse_genomes_project 13 52449125 52601391 - Ror2 protein_coding processed_transcript MGP_129S1SvImJ_T0036883.1 MGP_129S1SvImJ_G0020505.1 mouse_genomes_project 13 43609174 43689469 - MGP_129S1SvImJ_P0036883 Dtnbp1 protein_coding protein_coding MGP_129S1SvImJ_T0036884.1 MGP_129S1SvImJ_G0020505.1 mouse_genomes_project 13 43609180 43689469 - MGP_129S1SvImJ_P0036884 Dtnbp1 protein_coding protein_coding MGP_129S1SvImJ_T0038197.1 MGP_129S1SvImJ_G0020945.1 mouse_genomes_project 13 115642236 115645449 + MGP_129S1SvImJ_P0038197 Cdc20b protein_coding protein_coding MGP_129S1SvImJ_T0038198.1 MGP_129S1SvImJ_G0020945.1 mouse_genomes_project 13 115642504 115706108 + MGP_129S1SvImJ_P0038198 Cdc20b protein_coding protein_coding MGP_129S1SvImJ_T0038199.1 MGP_129S1SvImJ_G0020945.1 mouse_genomes_project 13 115642504 115706108 + MGP_129S1SvImJ_P0038199 Cdc20b protein_coding protein_coding MGP_129S1SvImJ_T0038200.1 MGP_129S1SvImJ_G0020945.1 mouse_genomes_project 13 115642504 115706108 + MGP_129S1SvImJ_P0038200 Cdc20b protein_coding protein_coding MGP_129S1SvImJ_T0038201.1 MGP_129S1SvImJ_G0020945.1 mouse_genomes_project 13 115642512 115645449 + MGP_129S1SvImJ_P0038201 Cdc20b protein_coding protein_coding MGP_129S1SvImJ_T0036642.1 MGP_129S1SvImJ_G0020406.1 mouse_genomes_project 13 25442859 25449935 + MGP_129S1SvImJ_P0036642 Prl2a1 protein_coding protein_coding MGP_129S1SvImJ_T0038218.1 MGP_129S1SvImJ_G0020957.1 mouse_genomes_project 13 117553042 117555867 + Mocs2 protein_coding retained_intron MGP_129S1SvImJ_T0038219.1 MGP_129S1SvImJ_G0020957.1 mouse_genomes_project 13 117553056 117556787 + Mocs2 protein_coding retained_intron MGP_129S1SvImJ_T0038220.1 MGP_129S1SvImJ_G0020957.1 mouse_genomes_project 13 117553068 117564890 + Mocs2 protein_coding retained_intron MGP_129S1SvImJ_T0038221.1 MGP_129S1SvImJ_G0020957.1 mouse_genomes_project 13 117553068 117564558 + MGP_129S1SvImJ_P0038221 Mocs2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038222.1 MGP_129S1SvImJ_G0020957.1 mouse_genomes_project 13 117553071 117565024 + MGP_129S1SvImJ_P0038222 Mocs2 protein_coding protein_coding MGP_129S1SvImJ_T0038223.1 MGP_129S1SvImJ_G0020957.1 mouse_genomes_project 13 117553075 117560321 + Mocs2 protein_coding retained_intron MGP_129S1SvImJ_T0038224.1 MGP_129S1SvImJ_G0020957.1 mouse_genomes_project 13 117553085 117564428 + MGP_129S1SvImJ_P0038224 Mocs2 protein_coding protein_coding MGP_129S1SvImJ_T0038225.1 MGP_129S1SvImJ_G0020957.1 mouse_genomes_project 13 117553092 117564607 + MGP_129S1SvImJ_P0038225 Mocs2 protein_coding protein_coding MGP_129S1SvImJ_T0038226.1 MGP_129S1SvImJ_G0020957.1 mouse_genomes_project 13 117553703 117560029 + MGP_129S1SvImJ_P0038226 Mocs2 protein_coding protein_coding MGP_129S1SvImJ_T0036606.1 MGP_129S1SvImJ_G0020387.1 mouse_genomes_project 13 22559659 22713729 + MGP_129S1SvImJ_P0036606 Dcdc2a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0036607.1 MGP_129S1SvImJ_G0020387.1 mouse_genomes_project 13 22560282 22627254 + MGP_129S1SvImJ_P0036607 Dcdc2a protein_coding protein_coding MGP_129S1SvImJ_T0036608.1 MGP_129S1SvImJ_G0020387.1 mouse_genomes_project 13 22601968 22625137 + Dcdc2a protein_coding processed_transcript MGP_129S1SvImJ_T0036609.1 MGP_129S1SvImJ_G0020387.1 mouse_genomes_project 13 22695056 22713293 + Dcdc2a protein_coding processed_transcript MGP_129S1SvImJ_T0036540.1 MGP_129S1SvImJ_G0020366.1 mouse_genomes_project 13 21205756 21207436 - MGP_129S1SvImJ_P0036540 Hist1h3a protein_coding protein_coding MGP_129S1SvImJ_T0036761.1 MGP_129S1SvImJ_G0020458.1 mouse_genomes_project 13 33840809 34060958 + MGP_129S1SvImJ_P0036761 Cdyl protein_coding protein_coding MGP_129S1SvImJ_T0036762.1 MGP_129S1SvImJ_G0020458.1 mouse_genomes_project 13 33928429 34060952 + MGP_129S1SvImJ_P0036762 Cdyl protein_coding protein_coding MGP_129S1SvImJ_T0037055.1 MGP_129S1SvImJ_G0020561.1 mouse_genomes_project 13 52665632 52711528 - MGP_129S1SvImJ_P0037055 Sptlc1 protein_coding protein_coding MGP_129S1SvImJ_T0036514.1 MGP_129S1SvImJ_G0020344.1 mouse_genomes_project 13 20942322 20942795 + MGP_129S1SvImJ_P0036514 Hist1h4h protein_coding protein_coding MGP_129S1SvImJ_T0038130.1 MGP_129S1SvImJ_G0020926.1 mouse_genomes_project 13 110625314 110702907 + MGP_129S1SvImJ_P0038130 Depdc1b protein_coding protein_coding MGP_129S1SvImJ_T0038131.1 MGP_129S1SvImJ_G0020926.1 mouse_genomes_project 13 110625350 110633697 + Depdc1b protein_coding retained_intron MGP_129S1SvImJ_T0038132.1 MGP_129S1SvImJ_G0020926.1 mouse_genomes_project 13 110625362 110715823 + MGP_129S1SvImJ_P0038132 Depdc1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038133.1 MGP_129S1SvImJ_G0020926.1 mouse_genomes_project 13 110625404 110702036 + MGP_129S1SvImJ_P0038133 Depdc1b protein_coding protein_coding MGP_129S1SvImJ_T0038134.1 MGP_129S1SvImJ_G0020926.1 mouse_genomes_project 13 110635747 110682187 + Depdc1b protein_coding processed_transcript MGP_129S1SvImJ_T0038135.1 MGP_129S1SvImJ_G0020926.1 mouse_genomes_project 13 110669773 110687264 + Depdc1b protein_coding retained_intron MGP_129S1SvImJ_T0000907.1 MGP_129S1SvImJ_G0000839.1 mouse_genomes_project 13 63532553 63533512 - TEC TEC MGP_129S1SvImJ_T0037523.1 MGP_129S1SvImJ_G0020731.1 mouse_genomes_project 13 69761248 69801815 - MGP_129S1SvImJ_P0037523 Papd7 protein_coding protein_coding MGP_129S1SvImJ_T0037524.1 MGP_129S1SvImJ_G0020731.1 mouse_genomes_project 13 69761251 69799280 - MGP_129S1SvImJ_P0037524 Papd7 protein_coding protein_coding MGP_129S1SvImJ_T0037252.1 MGP_129S1SvImJ_G0020621.1 mouse_genomes_project 13 56104222 56110299 - MGP_129S1SvImJ_P0037252 Lect2 protein_coding protein_coding MGP_129S1SvImJ_T0012933.1 MGP_129S1SvImJ_G0011022.1 mouse_genomes_project 13 54267583 54267839 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036541.1 MGP_129S1SvImJ_G0020367.1 mouse_genomes_project 13 21208767 21209409 + MGP_129S1SvImJ_P0036541 Hist1h1a protein_coding protein_coding MGP_129S1SvImJ_T0036591.1 MGP_129S1SvImJ_G0020380.1 mouse_genomes_project 13 22285500 22297857 + MGP_129S1SvImJ_P0036591 BC005537 protein_coding protein_coding MGP_129S1SvImJ_T0036592.1 MGP_129S1SvImJ_G0020380.1 mouse_genomes_project 13 22285863 22296504 + MGP_129S1SvImJ_P0036592 BC005537 protein_coding protein_coding MGP_129S1SvImJ_T0012975.1 MGP_129S1SvImJ_G0011064.1 mouse_genomes_project 13 113847803 113848047 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036441.1 MGP_129S1SvImJ_G0020289.1 mouse_genomes_project 13 18967889 18973373 + MGP_129S1SvImJ_P0036441 protein_coding protein_coding MGP_129S1SvImJ_T0036442.1 MGP_129S1SvImJ_G0020289.1 mouse_genomes_project 13 18972403 18973394 + MGP_129S1SvImJ_P0036442 protein_coding protein_coding MGP_129S1SvImJ_T0006535.1 MGP_129S1SvImJ_G0005430.1 mouse_genomes_project 13 24911120 24924129 + 4930511O05Rik lincRNA lincRNA MGP_129S1SvImJ_T0037681.1 MGP_129S1SvImJ_G0020790.1 mouse_genomes_project 13 82549970 82563813 + MGP_129S1SvImJ_P0037681 Cetn3 protein_coding protein_coding MGP_129S1SvImJ_T0006638.1 MGP_129S1SvImJ_G0005499.1 mouse_genomes_project 13 100841821 100861652 - lincRNA lincRNA MGP_129S1SvImJ_T0037417.1 MGP_129S1SvImJ_G0020673.1 mouse_genomes_project 13 64106329 64143597 - MGP_129S1SvImJ_P0037417 Slc35d2 protein_coding protein_coding MGP_129S1SvImJ_T0037220.1 MGP_129S1SvImJ_G0020606.1 mouse_genomes_project 13 55116637 55127076 + MGP_129S1SvImJ_P0037220 Caml protein_coding protein_coding MGP_129S1SvImJ_T0037221.1 MGP_129S1SvImJ_G0020606.1 mouse_genomes_project 13 55116830 55118881 + Caml protein_coding retained_intron MGP_129S1SvImJ_T0037222.1 MGP_129S1SvImJ_G0020606.1 mouse_genomes_project 13 55121502 55127076 + Caml protein_coding retained_intron MGP_129S1SvImJ_T0098483.1 MGP_129S1SvImJ_G0036568.1 mouse_genomes_project 13 135740 135854 + Gm23084 rRNA rRNA MGP_129S1SvImJ_T0038055.1 MGP_129S1SvImJ_G0020900.1 mouse_genomes_project 13 105825612 105849676 - MGP_129S1SvImJ_P0038055 Srek1 protein_coding protein_coding MGP_129S1SvImJ_T0036707.1 MGP_129S1SvImJ_G0020439.1 mouse_genomes_project 13 31486194 31497964 + MGP_129S1SvImJ_P0036707 protein_coding protein_coding MGP_129S1SvImJ_T0037572.1 MGP_129S1SvImJ_G0020751.1 mouse_genomes_project 13 74242824 74298989 + MGP_129S1SvImJ_P0037572 Slc12a7 protein_coding protein_coding MGP_129S1SvImJ_T0037522.1 MGP_129S1SvImJ_G0020730.1 mouse_genomes_project 13 68832865 69233320 - MGP_129S1SvImJ_P0037522 Adcy2 protein_coding protein_coding MGP_129S1SvImJ_T0036637.1 MGP_129S1SvImJ_G0020403.1 mouse_genomes_project 13 25260053 25270814 - MGP_129S1SvImJ_P0036637 Prl7a1 protein_coding protein_coding MGP_129S1SvImJ_T0036638.1 MGP_129S1SvImJ_G0020403.1 mouse_genomes_project 13 25260053 25270804 - MGP_129S1SvImJ_P0036638 Prl7a1 protein_coding protein_coding MGP_129S1SvImJ_T0009984.1 MGP_129S1SvImJ_G0008100.1 mouse_genomes_project 13 115644658 115644749 + Mir449a miRNA miRNA MGP_129S1SvImJ_T0038171.1 MGP_129S1SvImJ_G0020934.1 mouse_genomes_project 13 114244793 114315565 - MGP_129S1SvImJ_P0038171 Map3k1 protein_coding protein_coding MGP_129S1SvImJ_T0038172.1 MGP_129S1SvImJ_G0020934.1 mouse_genomes_project 13 114248684 114251269 - Map3k1 protein_coding retained_intron MGP_129S1SvImJ_T0038173.1 MGP_129S1SvImJ_G0020934.1 mouse_genomes_project 13 114253495 114254632 - Map3k1 protein_coding retained_intron MGP_129S1SvImJ_T0038174.1 MGP_129S1SvImJ_G0020934.1 mouse_genomes_project 13 114267536 114268481 - Map3k1 protein_coding processed_transcript MGP_129S1SvImJ_T0038175.1 MGP_129S1SvImJ_G0020934.1 mouse_genomes_project 13 114267911 114315040 - MGP_129S1SvImJ_P0038175 Map3k1 protein_coding protein_coding MGP_129S1SvImJ_T0002523.1 MGP_129S1SvImJ_G0002430.1 mouse_genomes_project 13 16326174 16326234 + MGP_129S1SvImJ_P0002523 Trgj1 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0009923.1 MGP_129S1SvImJ_G0008039.1 mouse_genomes_project 13 447357 447481 - Gm22460 miRNA miRNA MGP_129S1SvImJ_T0002609.1 MGP_129S1SvImJ_G0002510.1 mouse_genomes_project 13 16285445 16285913 + MGP_129S1SvImJ_P0002609 Tcrg-V7 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0036492.1 MGP_129S1SvImJ_G0020328.1 mouse_genomes_project 13 20203309 20204230 - MGP_129S1SvImJ_P0036492 Vmn1r210 protein_coding protein_coding MGP_129S1SvImJ_T0037365.1 MGP_129S1SvImJ_G0020658.1 mouse_genomes_project 13 60950973 60957058 - MGP_129S1SvImJ_P0037365 Ctsr protein_coding protein_coding MGP_129S1SvImJ_T0037877.1 MGP_129S1SvImJ_G0020842.1 mouse_genomes_project 13 96990992 97004164 - MGP_129S1SvImJ_P0037877 F2rl1 protein_coding protein_coding MGP_129S1SvImJ_T0036792.1 MGP_129S1SvImJ_G0020469.1 mouse_genomes_project 13 36353179 36377589 + MGP_129S1SvImJ_P0036792 Riok1 protein_coding protein_coding MGP_129S1SvImJ_T0037179.1 MGP_129S1SvImJ_G0020592.1 mouse_genomes_project 13 54813831 54838933 - MGP_129S1SvImJ_P0037179 Lman2 protein_coding protein_coding MGP_129S1SvImJ_T0037061.1 MGP_129S1SvImJ_G0020566.1 mouse_genomes_project 13 53572088 53605510 + MGP_129S1SvImJ_P0037061 Hrh2 protein_coding protein_coding MGP_129S1SvImJ_T0037617.1 MGP_129S1SvImJ_G0020773.1 mouse_genomes_project 13 76404154 76480153 - MGP_129S1SvImJ_P0037617 Rhobtb3 protein_coding protein_coding MGP_129S1SvImJ_T0037618.1 MGP_129S1SvImJ_G0020773.1 mouse_genomes_project 13 76406667 76423899 - Rhobtb3 protein_coding processed_transcript MGP_129S1SvImJ_T0037619.1 MGP_129S1SvImJ_G0020773.1 mouse_genomes_project 13 76454332 76480211 - MGP_129S1SvImJ_P0037619 Rhobtb3 protein_coding protein_coding MGP_129S1SvImJ_T0006555.1 MGP_129S1SvImJ_G0005443.1 mouse_genomes_project 13 29547967 29549169 + Gm11378 lincRNA lincRNA MGP_129S1SvImJ_T0037910.1 MGP_129S1SvImJ_G0020855.1 mouse_genomes_project 13 98600314 98614977 - MGP_129S1SvImJ_P0037910 1700029F12Rik protein_coding protein_coding MGP_129S1SvImJ_T0003512.1 MGP_129S1SvImJ_G0003204.1 mouse_genomes_project 13 93151969 93152582 + 1700119I11Rik antisense antisense MGP_129S1SvImJ_T0003513.1 MGP_129S1SvImJ_G0003204.1 mouse_genomes_project 13 93152022 93152576 + 1700119I11Rik antisense antisense MGP_129S1SvImJ_T0003531.1 MGP_129S1SvImJ_G0003216.1 mouse_genomes_project 13 114068095 114076489 - Gm15288 antisense antisense MGP_129S1SvImJ_T0037344.1 MGP_129S1SvImJ_G0020643.1 mouse_genomes_project 13 59453239 59457319 - MGP_129S1SvImJ_P0037344 1700014D04Rik protein_coding protein_coding MGP_129S1SvImJ_T0037345.1 MGP_129S1SvImJ_G0020643.1 mouse_genomes_project 13 59454353 59455148 - MGP_129S1SvImJ_P0037345 1700014D04Rik protein_coding protein_coding MGP_129S1SvImJ_T0037346.1 MGP_129S1SvImJ_G0020643.1 mouse_genomes_project 13 59456104 59459157 - MGP_129S1SvImJ_P0037346 1700014D04Rik protein_coding protein_coding MGP_129S1SvImJ_T0037659.1 MGP_129S1SvImJ_G0020786.1 mouse_genomes_project 13 81833418 82400131 - MGP_129S1SvImJ_P0037659 Adgrv1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0037660.1 MGP_129S1SvImJ_G0020786.1 mouse_genomes_project 13 81833418 82361237 - MGP_129S1SvImJ_P0037660 Adgrv1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0037661.1 MGP_129S1SvImJ_G0020786.1 mouse_genomes_project 13 81833426 82400257 - MGP_129S1SvImJ_P0037661 Adgrv1 protein_coding protein_coding MGP_129S1SvImJ_T0037662.1 MGP_129S1SvImJ_G0020786.1 mouse_genomes_project 13 81833426 82090176 - MGP_129S1SvImJ_P0037662 Adgrv1 protein_coding protein_coding MGP_129S1SvImJ_T0037663.1 MGP_129S1SvImJ_G0020786.1 mouse_genomes_project 13 81833427 82196897 - MGP_129S1SvImJ_P0037663 Adgrv1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037664.1 MGP_129S1SvImJ_G0020786.1 mouse_genomes_project 13 81845293 82089697 - Adgrv1 protein_coding processed_transcript MGP_129S1SvImJ_T0037665.1 MGP_129S1SvImJ_G0020786.1 mouse_genomes_project 13 82265045 82338716 - MGP_129S1SvImJ_P0037665 Adgrv1 protein_coding protein_coding MGP_129S1SvImJ_T0037666.1 MGP_129S1SvImJ_G0020786.1 mouse_genomes_project 13 82265046 82352891 - Adgrv1 protein_coding retained_intron MGP_129S1SvImJ_T0037667.1 MGP_129S1SvImJ_G0020786.1 mouse_genomes_project 13 82265046 82294460 - Adgrv1 protein_coding retained_intron MGP_129S1SvImJ_T0037668.1 MGP_129S1SvImJ_G0020786.1 mouse_genomes_project 13 82304868 82307966 - Adgrv1 protein_coding retained_intron MGP_129S1SvImJ_T0037669.1 MGP_129S1SvImJ_G0020786.1 mouse_genomes_project 13 82321976 82326084 - Adgrv1 protein_coding retained_intron MGP_129S1SvImJ_T0037670.1 MGP_129S1SvImJ_G0020786.1 mouse_genomes_project 13 82327543 82400242 - MGP_129S1SvImJ_P0037670 Adgrv1 protein_coding protein_coding MGP_129S1SvImJ_T0037671.1 MGP_129S1SvImJ_G0020786.1 mouse_genomes_project 13 82345501 82400242 - MGP_129S1SvImJ_P0037671 Adgrv1 protein_coding protein_coding MGP_129S1SvImJ_T0037672.1 MGP_129S1SvImJ_G0020786.1 mouse_genomes_project 13 82347116 82400244 - MGP_129S1SvImJ_P0037672 Adgrv1 protein_coding protein_coding MGP_129S1SvImJ_T0037673.1 MGP_129S1SvImJ_G0020786.1 mouse_genomes_project 13 82349416 82352116 - Adgrv1 protein_coding retained_intron MGP_129S1SvImJ_T0037593.1 MGP_129S1SvImJ_G0020762.1 mouse_genomes_project 13 74803699 74817840 - MGP_129S1SvImJ_P0037593 Pdcd6 protein_coding protein_coding MGP_129S1SvImJ_T0009951.1 MGP_129S1SvImJ_G0008067.1 mouse_genomes_project 13 51008448 51010473 + miRNA miRNA MGP_129S1SvImJ_T0037944.1 MGP_129S1SvImJ_G0020866.1 mouse_genomes_project 13 100058150 100060612 + MGP_129S1SvImJ_P0037944 Foxd1 protein_coding protein_coding MGP_129S1SvImJ_T0037872.1 MGP_129S1SvImJ_G0020838.1 mouse_genomes_project 13 96782690 96795222 + MGP_129S1SvImJ_P0037872 Zbed3 protein_coding protein_coding MGP_129S1SvImJ_T0009976.1 MGP_129S1SvImJ_G0008092.1 mouse_genomes_project 13 95937257 95937371 + Gm25109 miRNA miRNA MGP_129S1SvImJ_T0036499.1 MGP_129S1SvImJ_G0020335.1 mouse_genomes_project 13 20504992 20505889 - MGP_129S1SvImJ_P0036499 Vmn1r220 protein_coding protein_coding MGP_129S1SvImJ_T0037742.1 MGP_129S1SvImJ_G0020799.1 mouse_genomes_project 13 90708196 90785658 + MGP_129S1SvImJ_P0037742 Hapln1 protein_coding protein_coding MGP_129S1SvImJ_T0037280.1 MGP_129S1SvImJ_G0020630.1 mouse_genomes_project 13 57861653 57907174 - MGP_129S1SvImJ_P0037280 Gkap1 protein_coding protein_coding MGP_129S1SvImJ_T0037478.1 MGP_129S1SvImJ_G0020705.1 mouse_genomes_project 13 67432555 67447556 - MGP_129S1SvImJ_P0037478 Zfp457 protein_coding protein_coding MGP_129S1SvImJ_T0037479.1 MGP_129S1SvImJ_G0020705.1 mouse_genomes_project 13 67446829 67447611 - Zfp457 protein_coding retained_intron MGP_129S1SvImJ_T0036427.1 MGP_129S1SvImJ_G0020280.1 mouse_genomes_project 13 18762485 18767037 + MGP_129S1SvImJ_P0036427 protein_coding protein_coding MGP_129S1SvImJ_T0100621.1 MGP_129S1SvImJ_G0038688.1 mouse_genomes_project 13 8113729 8113849 - Gm25496 snoRNA snoRNA MGP_129S1SvImJ_T0038166.1 MGP_129S1SvImJ_G0020933.1 mouse_genomes_project 13 114196023 114223041 + MGP_129S1SvImJ_P0038166 Mier3 protein_coding protein_coding MGP_129S1SvImJ_T0038167.1 MGP_129S1SvImJ_G0020933.1 mouse_genomes_project 13 114196161 114222081 + MGP_129S1SvImJ_P0038167 Mier3 protein_coding protein_coding MGP_129S1SvImJ_T0038168.1 MGP_129S1SvImJ_G0020933.1 mouse_genomes_project 13 114196170 114202569 + Mier3 protein_coding retained_intron MGP_129S1SvImJ_T0038169.1 MGP_129S1SvImJ_G0020933.1 mouse_genomes_project 13 114196171 114223038 + MGP_129S1SvImJ_P0038169 Mier3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038170.1 MGP_129S1SvImJ_G0020933.1 mouse_genomes_project 13 114196646 114223047 + MGP_129S1SvImJ_P0038170 Mier3 protein_coding protein_coding MGP_129S1SvImJ_T0036387.1 MGP_129S1SvImJ_G0020260.1 mouse_genomes_project 13 16799606 16809220 + MGP_129S1SvImJ_P0036387 Sfrp4 protein_coding protein_coding MGP_129S1SvImJ_T0037223.1 MGP_129S1SvImJ_G0020607.1 mouse_genomes_project 13 55129584 55180279 + MGP_129S1SvImJ_P0037223 Ddx46 protein_coding protein_coding MGP_129S1SvImJ_T0037224.1 MGP_129S1SvImJ_G0020607.1 mouse_genomes_project 13 55129584 55180279 + MGP_129S1SvImJ_P0037224 Ddx46 protein_coding protein_coding MGP_129S1SvImJ_T0037225.1 MGP_129S1SvImJ_G0020607.1 mouse_genomes_project 13 55129736 55180287 + MGP_129S1SvImJ_P0037225 Ddx46 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0036814.1 MGP_129S1SvImJ_G0020481.1 mouse_genomes_project 13 39478376 39493746 + MGP_129S1SvImJ_P0036814 Pak1ip1 protein_coding protein_coding MGP_129S1SvImJ_T0036815.1 MGP_129S1SvImJ_G0020481.1 mouse_genomes_project 13 39478377 39485944 + Pak1ip1 protein_coding retained_intron MGP_129S1SvImJ_T0036816.1 MGP_129S1SvImJ_G0020481.1 mouse_genomes_project 13 39478591 39493738 + Pak1ip1 protein_coding retained_intron MGP_129S1SvImJ_T0036817.1 MGP_129S1SvImJ_G0020481.1 mouse_genomes_project 13 39478613 39485593 + Pak1ip1 protein_coding processed_transcript MGP_129S1SvImJ_T0036818.1 MGP_129S1SvImJ_G0020481.1 mouse_genomes_project 13 39478619 39493750 + Pak1ip1 protein_coding retained_intron MGP_129S1SvImJ_T0037089.1 MGP_129S1SvImJ_G0020574.1 mouse_genomes_project 13 53998684 54017607 - MGP_129S1SvImJ_P0037089 Cltb protein_coding protein_coding MGP_129S1SvImJ_T0037090.1 MGP_129S1SvImJ_G0020574.1 mouse_genomes_project 13 53999821 54005445 - MGP_129S1SvImJ_P0037090 Cltb protein_coding protein_coding MGP_129S1SvImJ_T0037091.1 MGP_129S1SvImJ_G0020574.1 mouse_genomes_project 13 53999868 54017555 - MGP_129S1SvImJ_P0037091 Cltb protein_coding protein_coding MGP_129S1SvImJ_T0037092.1 MGP_129S1SvImJ_G0020574.1 mouse_genomes_project 13 54002323 54017555 - Cltb protein_coding retained_intron MGP_129S1SvImJ_T0006651.1 MGP_129S1SvImJ_G0005511.1 mouse_genomes_project 13 114377583 114381561 + Gm15326 lincRNA lincRNA MGP_129S1SvImJ_T0006652.1 MGP_129S1SvImJ_G0005511.1 mouse_genomes_project 13 114380763 114384354 + Gm15326 lincRNA lincRNA MGP_129S1SvImJ_T0017400.1 MGP_129S1SvImJ_G0015263.1 mouse_genomes_project 13 114316792 114317364 + processed_transcript processed_transcript MGP_129S1SvImJ_T0037180.1 MGP_129S1SvImJ_G0020593.1 mouse_genomes_project 13 54846027 54861413 + MGP_129S1SvImJ_P0037180 Rgs14 protein_coding protein_coding MGP_129S1SvImJ_T0037181.1 MGP_129S1SvImJ_G0020593.1 mouse_genomes_project 13 54846066 54856168 + MGP_129S1SvImJ_P0037181 Rgs14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037182.1 MGP_129S1SvImJ_G0020593.1 mouse_genomes_project 13 54855891 54861412 + Rgs14 protein_coding retained_intron MGP_129S1SvImJ_T0037621.1 MGP_129S1SvImJ_G0020775.1 mouse_genomes_project 13 76547130 76566815 - MGP_129S1SvImJ_P0037621 Rfesd protein_coding protein_coding MGP_129S1SvImJ_T0037622.1 MGP_129S1SvImJ_G0020775.1 mouse_genomes_project 13 76547130 76566709 - MGP_129S1SvImJ_P0037622 Rfesd protein_coding protein_coding MGP_129S1SvImJ_T0037623.1 MGP_129S1SvImJ_G0020775.1 mouse_genomes_project 13 76547132 76566665 - MGP_129S1SvImJ_P0037623 Rfesd protein_coding protein_coding MGP_129S1SvImJ_T0037752.1 MGP_129S1SvImJ_G0020801.1 mouse_genomes_project 13 90958654 91296621 - MGP_129S1SvImJ_P0037752 Xrcc4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037753.1 MGP_129S1SvImJ_G0020801.1 mouse_genomes_project 13 91043081 91296706 - MGP_129S1SvImJ_P0037753 Xrcc4 protein_coding protein_coding MGP_129S1SvImJ_T0037754.1 MGP_129S1SvImJ_G0020801.1 mouse_genomes_project 13 91266645 91296634 - MGP_129S1SvImJ_P0037754 Xrcc4 protein_coding protein_coding MGP_129S1SvImJ_T0037755.1 MGP_129S1SvImJ_G0020801.1 mouse_genomes_project 13 91266680 91296180 - MGP_129S1SvImJ_P0037755 Xrcc4 protein_coding protein_coding MGP_129S1SvImJ_T0037796.1 MGP_129S1SvImJ_G0020813.1 mouse_genomes_project 13 93598232 93599436 + MGP_129S1SvImJ_P0037796 Gm20379 protein_coding protein_coding MGP_129S1SvImJ_T0012897.1 MGP_129S1SvImJ_G0010986.1 mouse_genomes_project 13 20489699 20490163 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036677.1 MGP_129S1SvImJ_G0020422.1 mouse_genomes_project 13 29555268 29560852 + MGP_129S1SvImJ_P0036677 Foxf2 protein_coding protein_coding MGP_129S1SvImJ_T0036669.1 MGP_129S1SvImJ_G0020416.1 mouse_genomes_project 13 28618100 28635800 + MGP_129S1SvImJ_P0036669 Irf4 protein_coding protein_coding MGP_129S1SvImJ_T0036670.1 MGP_129S1SvImJ_G0020416.1 mouse_genomes_project 13 28618100 28635800 + MGP_129S1SvImJ_P0036670 Irf4 protein_coding protein_coding MGP_129S1SvImJ_T0012921.1 MGP_129S1SvImJ_G0011010.1 mouse_genomes_project 13 28904445 28904986 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099372.1 MGP_129S1SvImJ_G0037439.1 mouse_genomes_project 13 91117959 91118061 - Gm24498 snRNA snRNA MGP_129S1SvImJ_T0037807.1 MGP_129S1SvImJ_G0020816.1 mouse_genomes_project 13 93752303 93787770 - MGP_129S1SvImJ_P0037807 Fam151b protein_coding protein_coding MGP_129S1SvImJ_T0006581.1 MGP_129S1SvImJ_G0005463.1 mouse_genomes_project 13 51228405 51232745 + Gm26651 lincRNA lincRNA MGP_129S1SvImJ_T0012883.1 MGP_129S1SvImJ_G0010972.1 mouse_genomes_project 13 17932345 17933345 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000902.1 MGP_129S1SvImJ_G0000834.1 mouse_genomes_project 13 37649092 37649455 + TEC TEC MGP_129S1SvImJ_T0037213.1 MGP_129S1SvImJ_G0020602.1 mouse_genomes_project 13 55019823 55026014 - MGP_129S1SvImJ_P0037213 Ddx41 protein_coding protein_coding MGP_129S1SvImJ_T0011381.1 MGP_129S1SvImJ_G0009497.1 mouse_genomes_project 13 104258519 104258803 + Gm25808 misc_RNA misc_RNA MGP_129S1SvImJ_T0037953.1 MGP_129S1SvImJ_G0020871.1 mouse_genomes_project 13 100595380 100686031 - MGP_129S1SvImJ_P0037953 Tnpo1 protein_coding protein_coding MGP_129S1SvImJ_T0037954.1 MGP_129S1SvImJ_G0020871.1 mouse_genomes_project 13 100602182 100644916 - MGP_129S1SvImJ_P0037954 Tnpo1 protein_coding protein_coding MGP_129S1SvImJ_T0037955.1 MGP_129S1SvImJ_G0020871.1 mouse_genomes_project 13 100629521 100644932 - MGP_129S1SvImJ_P0037955 Tnpo1 protein_coding protein_coding MGP_129S1SvImJ_T0036406.1 MGP_129S1SvImJ_G0020270.1 mouse_genomes_project 13 18536646 18545289 - MGP_129S1SvImJ_P0036406 Gpx5 protein_coding protein_coding MGP_129S1SvImJ_T0036407.1 MGP_129S1SvImJ_G0020270.1 mouse_genomes_project 13 18536646 18545244 - MGP_129S1SvImJ_P0036407 Gpx5 protein_coding protein_coding MGP_129S1SvImJ_T0036454.1 MGP_129S1SvImJ_G0020300.1 mouse_genomes_project 13 19067195 19115683 + MGP_129S1SvImJ_P0036454 Hist1h2br protein_coding protein_coding MGP_129S1SvImJ_T0036455.1 MGP_129S1SvImJ_G0020300.1 mouse_genomes_project 13 19067207 19116548 + MGP_129S1SvImJ_P0036455 Hist1h2br protein_coding protein_coding MGP_129S1SvImJ_T0036689.1 MGP_129S1SvImJ_G0020428.1 mouse_genomes_project 13 30845955 30857234 - MGP_129S1SvImJ_P0036689 Serpinb1a protein_coding protein_coding MGP_129S1SvImJ_T0036690.1 MGP_129S1SvImJ_G0020428.1 mouse_genomes_project 13 30845956 30857234 - MGP_129S1SvImJ_P0036690 Serpinb1a protein_coding protein_coding MGP_129S1SvImJ_T0006541.1 MGP_129S1SvImJ_G0005433.1 mouse_genomes_project 13 27907928 27912223 + Gm11368 lincRNA lincRNA MGP_129S1SvImJ_T0036938.1 MGP_129S1SvImJ_G0020525.1 mouse_genomes_project 13 47482712 47536321 - MGP_129S1SvImJ_P0036938 Ptpdc1 protein_coding protein_coding MGP_129S1SvImJ_T0036527.1 MGP_129S1SvImJ_G0020355.1 mouse_genomes_project 13 21117646 21126410 + MGP_129S1SvImJ_P0036527 Hist1h2bc protein_coding protein_coding MGP_129S1SvImJ_T0037509.1 MGP_129S1SvImJ_G0020721.1 mouse_genomes_project 13 67915089 67922162 - MGP_129S1SvImJ_P0037509 Zfp85 protein_coding protein_coding MGP_129S1SvImJ_T0006594.1 MGP_129S1SvImJ_G0005469.1 mouse_genomes_project 13 54353090 54356532 - 4930526F13Rik lincRNA lincRNA MGP_129S1SvImJ_T0036208.1 MGP_129S1SvImJ_G0020205.1 mouse_genomes_project 13 721086 740796 + MGP_129S1SvImJ_P0036208 Akr1c19 protein_coding protein_coding MGP_129S1SvImJ_T0036209.1 MGP_129S1SvImJ_G0020205.1 mouse_genomes_project 13 726129 740795 + MGP_129S1SvImJ_P0036209 Akr1c19 protein_coding protein_coding MGP_129S1SvImJ_T0036210.1 MGP_129S1SvImJ_G0020205.1 mouse_genomes_project 13 737694 741117 + Akr1c19 protein_coding processed_transcript MGP_129S1SvImJ_T0038091.1 MGP_129S1SvImJ_G0020912.1 mouse_genomes_project 13 107077351 107187665 - MGP_129S1SvImJ_P0038091 Rgs7bp protein_coding protein_coding MGP_129S1SvImJ_T0006532.1 MGP_129S1SvImJ_G0005428.1 mouse_genomes_project 13 23485090 23497479 - Gm11351 lincRNA lincRNA MGP_129S1SvImJ_T0038032.1 MGP_129S1SvImJ_G0020898.1 mouse_genomes_project 13 104744499 104761732 + MGP_129S1SvImJ_P0038032 Cd180 protein_coding protein_coding MGP_129S1SvImJ_T0038033.1 MGP_129S1SvImJ_G0020898.1 mouse_genomes_project 13 104744506 104758376 + MGP_129S1SvImJ_P0038033 Cd180 protein_coding protein_coding MGP_129S1SvImJ_T0038034.1 MGP_129S1SvImJ_G0020898.1 mouse_genomes_project 13 104744514 104759180 + MGP_129S1SvImJ_P0038034 Cd180 protein_coding protein_coding MGP_129S1SvImJ_T0038035.1 MGP_129S1SvImJ_G0020898.1 mouse_genomes_project 13 104744520 104796830 + MGP_129S1SvImJ_P0038035 Cd180 protein_coding protein_coding MGP_129S1SvImJ_T0038036.1 MGP_129S1SvImJ_G0020898.1 mouse_genomes_project 13 104744552 104796705 + MGP_129S1SvImJ_P0038036 Cd180 protein_coding protein_coding MGP_129S1SvImJ_T0036495.1 MGP_129S1SvImJ_G0020331.1 mouse_genomes_project 13 20418378 20419482 + MGP_129S1SvImJ_P0036495 Vmn1r214 protein_coding protein_coding MGP_129S1SvImJ_T0038116.1 MGP_129S1SvImJ_G0020921.1 mouse_genomes_project 13 109978636 110155091 - MGP_129S1SvImJ_P0038116 Zswim6 protein_coding protein_coding MGP_129S1SvImJ_T0011363.1 MGP_129S1SvImJ_G0009479.1 mouse_genomes_project 13 5745691 5745986 + Gm23553 misc_RNA misc_RNA MGP_129S1SvImJ_T0000897.1 MGP_129S1SvImJ_G0000830.1 mouse_genomes_project 13 15080240 15087001 + TEC TEC MGP_129S1SvImJ_T0036515.1 MGP_129S1SvImJ_G0020345.1 mouse_genomes_project 13 20946658 20957686 + MGP_129S1SvImJ_P0036515 Hist1h3c protein_coding protein_coding MGP_129S1SvImJ_T0037449.1 MGP_129S1SvImJ_G0020692.1 mouse_genomes_project 13 67011787 67024508 - MGP_129S1SvImJ_P0037449 Mterf3 protein_coding protein_coding MGP_129S1SvImJ_T0037451.1 MGP_129S1SvImJ_G0020692.1 mouse_genomes_project 13 67019994 67040415 - MGP_129S1SvImJ_P0037451 Mterf3 protein_coding protein_coding MGP_129S1SvImJ_T0037452.1 MGP_129S1SvImJ_G0020692.1 mouse_genomes_project 13 67020002 67040394 - MGP_129S1SvImJ_P0037452 Mterf3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037453.1 MGP_129S1SvImJ_G0020692.1 mouse_genomes_project 13 67020113 67027536 - Mterf3 protein_coding processed_transcript MGP_129S1SvImJ_T0037454.1 MGP_129S1SvImJ_G0020692.1 mouse_genomes_project 13 67024920 67040035 - MGP_129S1SvImJ_P0037454 Mterf3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037455.1 MGP_129S1SvImJ_G0020692.1 mouse_genomes_project 13 67024950 67037348 - MGP_129S1SvImJ_P0037455 Mterf3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037456.1 MGP_129S1SvImJ_G0020692.1 mouse_genomes_project 13 67029947 67040231 - MGP_129S1SvImJ_P0037456 Mterf3 protein_coding protein_coding MGP_129S1SvImJ_T0037457.1 MGP_129S1SvImJ_G0020692.1 mouse_genomes_project 13 67035396 67037410 - MGP_129S1SvImJ_P0037457 Mterf3 protein_coding protein_coding MGP_129S1SvImJ_T0037458.1 MGP_129S1SvImJ_G0020692.1 mouse_genomes_project 13 67037118 67040365 - MGP_129S1SvImJ_P0037458 Mterf3 protein_coding protein_coding MGP_129S1SvImJ_T0037459.1 MGP_129S1SvImJ_G0020692.1 mouse_genomes_project 13 67038513 67040368 - Mterf3 protein_coding processed_transcript MGP_129S1SvImJ_T0037712.1 MGP_129S1SvImJ_G0020793.1 mouse_genomes_project 13 86050738 86053145 - MGP_129S1SvImJ_P0037712 protein_coding protein_coding MGP_129S1SvImJ_T0036808.1 MGP_129S1SvImJ_G0020478.1 mouse_genomes_project 13 39160833 39166046 + MGP_129S1SvImJ_P0036808 Gm9979 protein_coding protein_coding MGP_129S1SvImJ_T0037377.1 MGP_129S1SvImJ_G0020668.1 mouse_genomes_project 13 62962523 63259748 + MGP_129S1SvImJ_P0037377 2010111I01Rik protein_coding protein_coding MGP_129S1SvImJ_T0037378.1 MGP_129S1SvImJ_G0020668.1 mouse_genomes_project 13 62962756 63262377 + MGP_129S1SvImJ_P0037378 2010111I01Rik protein_coding protein_coding MGP_129S1SvImJ_T0037379.1 MGP_129S1SvImJ_G0020668.1 mouse_genomes_project 13 63241066 63286204 + MGP_129S1SvImJ_P0037379 2010111I01Rik protein_coding protein_coding MGP_129S1SvImJ_T0036530.1 MGP_129S1SvImJ_G0020358.1 mouse_genomes_project 13 21133499 21133897 - MGP_129S1SvImJ_P0036530 Hist1h4c protein_coding protein_coding MGP_129S1SvImJ_T0037963.1 MGP_129S1SvImJ_G0020879.1 mouse_genomes_project 13 101843038 101932096 - MGP_129S1SvImJ_P0037963 Bdp1 protein_coding protein_coding MGP_129S1SvImJ_T0037964.1 MGP_129S1SvImJ_G0020879.1 mouse_genomes_project 13 101843040 101884200 - MGP_129S1SvImJ_P0037964 Bdp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037965.1 MGP_129S1SvImJ_G0020879.1 mouse_genomes_project 13 101848345 101931864 - MGP_129S1SvImJ_P0037965 Bdp1 protein_coding protein_coding MGP_129S1SvImJ_T0037966.1 MGP_129S1SvImJ_G0020879.1 mouse_genomes_project 13 101889390 101894438 - Bdp1 protein_coding retained_intron MGP_129S1SvImJ_T0037967.1 MGP_129S1SvImJ_G0020879.1 mouse_genomes_project 13 101906700 101926568 - MGP_129S1SvImJ_P0037967 Bdp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037968.1 MGP_129S1SvImJ_G0020879.1 mouse_genomes_project 13 101925529 101931903 - MGP_129S1SvImJ_P0037968 Bdp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036827.1 MGP_129S1SvImJ_G0020486.1 mouse_genomes_project 13 39666378 39705257 - MGP_129S1SvImJ_P0036827 Elovl2 protein_coding protein_coding MGP_129S1SvImJ_T0036828.1 MGP_129S1SvImJ_G0020486.1 mouse_genomes_project 13 39666382 39705014 - MGP_129S1SvImJ_P0036828 Elovl2 protein_coding protein_coding MGP_129S1SvImJ_T0038270.1 MGP_129S1SvImJ_G0020980.1 mouse_genomes_project 13 122778980 122779706 - MGP_129S1SvImJ_P0038270 protein_coding protein_coding MGP_129S1SvImJ_T0000927.1 MGP_129S1SvImJ_G0000859.1 mouse_genomes_project 13 116916284 116929105 + TEC TEC MGP_129S1SvImJ_T0037131.1 MGP_129S1SvImJ_G0020581.1 mouse_genomes_project 13 54214458 54221858 + MGP_129S1SvImJ_P0037131 Tspan17 protein_coding protein_coding MGP_129S1SvImJ_T0037132.1 MGP_129S1SvImJ_G0020581.1 mouse_genomes_project 13 54214484 54221850 + MGP_129S1SvImJ_P0037132 Tspan17 protein_coding protein_coding MGP_129S1SvImJ_T0037133.1 MGP_129S1SvImJ_G0020581.1 mouse_genomes_project 13 54214544 54221269 + MGP_129S1SvImJ_P0037133 Tspan17 protein_coding protein_coding MGP_129S1SvImJ_T0037134.1 MGP_129S1SvImJ_G0020581.1 mouse_genomes_project 13 54214676 54221200 + MGP_129S1SvImJ_P0037134 Tspan17 protein_coding protein_coding MGP_129S1SvImJ_T0037135.1 MGP_129S1SvImJ_G0020581.1 mouse_genomes_project 13 54214676 54221304 + MGP_129S1SvImJ_P0037135 Tspan17 protein_coding protein_coding MGP_129S1SvImJ_T0037136.1 MGP_129S1SvImJ_G0020581.1 mouse_genomes_project 13 54214726 54220230 + MGP_129S1SvImJ_P0037136 Tspan17 protein_coding protein_coding MGP_129S1SvImJ_T0037137.1 MGP_129S1SvImJ_G0020581.1 mouse_genomes_project 13 54217821 54221247 + MGP_129S1SvImJ_P0037137 Tspan17 protein_coding protein_coding MGP_129S1SvImJ_T0037138.1 MGP_129S1SvImJ_G0020581.1 mouse_genomes_project 13 54217952 54221857 + MGP_129S1SvImJ_P0037138 Tspan17 protein_coding protein_coding MGP_129S1SvImJ_T0037139.1 MGP_129S1SvImJ_G0020581.1 mouse_genomes_project 13 54220465 54221850 + Tspan17 protein_coding retained_intron MGP_129S1SvImJ_T0036675.1 MGP_129S1SvImJ_G0020420.1 mouse_genomes_project 13 29479662 29482862 - MGP_129S1SvImJ_P0036675 A530084C06Rik protein_coding protein_coding MGP_129S1SvImJ_T0003472.1 MGP_129S1SvImJ_G0003183.1 mouse_genomes_project 13 40306727 40307740 + 1700061E18Rik antisense antisense MGP_129S1SvImJ_T0006613.1 MGP_129S1SvImJ_G0005484.1 mouse_genomes_project 13 81700158 81863720 + 9330111N05Rik lincRNA lincRNA MGP_129S1SvImJ_T0006614.1 MGP_129S1SvImJ_G0005484.1 mouse_genomes_project 13 81701344 81820335 + 9330111N05Rik lincRNA lincRNA MGP_129S1SvImJ_T0006615.1 MGP_129S1SvImJ_G0005484.1 mouse_genomes_project 13 81719387 81866160 + 9330111N05Rik lincRNA lincRNA MGP_129S1SvImJ_T0037562.1 MGP_129S1SvImJ_G0020748.1 mouse_genomes_project 13 74082982 74107608 + MGP_129S1SvImJ_P0037562 Tert protein_coding protein_coding MGP_129S1SvImJ_T0037895.1 MGP_129S1SvImJ_G0020852.1 mouse_genomes_project 13 98083702 98193181 + MGP_129S1SvImJ_P0037895 Col4a3bp protein_coding protein_coding MGP_129S1SvImJ_T0037896.1 MGP_129S1SvImJ_G0020852.1 mouse_genomes_project 13 98083819 98195336 + MGP_129S1SvImJ_P0037896 Col4a3bp protein_coding protein_coding MGP_129S1SvImJ_T0037897.1 MGP_129S1SvImJ_G0020852.1 mouse_genomes_project 13 98083819 98195336 + MGP_129S1SvImJ_P0037897 Col4a3bp protein_coding protein_coding MGP_129S1SvImJ_T0036555.1 MGP_129S1SvImJ_G0020375.1 mouse_genomes_project 13 21404121 21443917 - MGP_129S1SvImJ_P0036555 Scgn protein_coding protein_coding MGP_129S1SvImJ_T0036556.1 MGP_129S1SvImJ_G0020375.1 mouse_genomes_project 13 21412795 21417848 - Scgn protein_coding processed_transcript MGP_129S1SvImJ_T0037813.1 MGP_129S1SvImJ_G0020819.1 mouse_genomes_project 13 93930787 94036253 + MGP_129S1SvImJ_P0037813 Serinc5 protein_coding protein_coding MGP_129S1SvImJ_T0036539.1 MGP_129S1SvImJ_G0020365.1 mouse_genomes_project 13 21204593 21205134 - MGP_129S1SvImJ_P0036539 Hist1h4a protein_coding protein_coding MGP_129S1SvImJ_T0100643.1 MGP_129S1SvImJ_G0038710.1 mouse_genomes_project 13 76227676 76227759 + Gm23012 snoRNA snoRNA MGP_129S1SvImJ_T0000899.1 MGP_129S1SvImJ_G0000832.1 mouse_genomes_project 13 35782446 35782786 - TEC TEC MGP_129S1SvImJ_T0006595.1 MGP_129S1SvImJ_G0005470.1 mouse_genomes_project 13 55344343 55345079 - Gm28760 lincRNA lincRNA MGP_129S1SvImJ_T0006596.1 MGP_129S1SvImJ_G0005470.1 mouse_genomes_project 13 55344343 55345076 - Gm28760 lincRNA lincRNA MGP_129S1SvImJ_T0099377.1 MGP_129S1SvImJ_G0037444.1 mouse_genomes_project 13 105729321 105729428 + Gm24870 snRNA snRNA MGP_129S1SvImJ_T0036316.1 MGP_129S1SvImJ_G0020233.1 mouse_genomes_project 13 9525872 10457040 + MGP_129S1SvImJ_P0036316 Nid1 protein_coding protein_coding MGP_129S1SvImJ_T0006570.1 MGP_129S1SvImJ_G0005455.1 mouse_genomes_project 13 43041154 43101506 - Gm27007 lincRNA lincRNA MGP_129S1SvImJ_T0003515.1 MGP_129S1SvImJ_G0003206.1 mouse_genomes_project 13 94982270 94985668 + Gm15622 antisense antisense MGP_129S1SvImJ_T0098312.1 MGP_129S1SvImJ_G0036397.1 mouse_genomes_project 13 45816640 45817159 + pseudogene pseudogene MGP_129S1SvImJ_T0100640.1 MGP_129S1SvImJ_G0038707.1 mouse_genomes_project 13 57961284 57961426 + Gm24284 snoRNA snoRNA MGP_129S1SvImJ_T0036400.1 MGP_129S1SvImJ_G0020268.1 mouse_genomes_project 13 18386334 18387398 - MGP_129S1SvImJ_P0036400 Olfr1368 protein_coding protein_coding MGP_129S1SvImJ_T0036401.1 MGP_129S1SvImJ_G0020268.1 mouse_genomes_project 13 18386960 18390183 - MGP_129S1SvImJ_P0036401 Olfr1368 protein_coding protein_coding MGP_129S1SvImJ_T0000917.1 MGP_129S1SvImJ_G0000849.1 mouse_genomes_project 13 91850380 91850793 + TEC TEC MGP_129S1SvImJ_T0036634.1 MGP_129S1SvImJ_G0020401.1 mouse_genomes_project 13 25198356 25206457 - MGP_129S1SvImJ_P0036634 Prl8a1 protein_coding protein_coding MGP_129S1SvImJ_T0036635.1 MGP_129S1SvImJ_G0020401.1 mouse_genomes_project 13 25198866 25206457 - MGP_129S1SvImJ_P0036635 Prl8a1 protein_coding protein_coding MGP_129S1SvImJ_T0038009.1 MGP_129S1SvImJ_G0020891.1 mouse_genomes_project 13 102599724 102627402 + MGP_129S1SvImJ_P0038009 Ccdc125 protein_coding protein_coding MGP_129S1SvImJ_T0038010.1 MGP_129S1SvImJ_G0020891.1 mouse_genomes_project 13 102599724 102627402 + MGP_129S1SvImJ_P0038010 Ccdc125 protein_coding protein_coding MGP_129S1SvImJ_T0036968.1 MGP_129S1SvImJ_G0020534.1 mouse_genomes_project 13 48314398 48359626 + MGP_129S1SvImJ_P0036968 Bicd2 protein_coding protein_coding MGP_129S1SvImJ_T0036969.1 MGP_129S1SvImJ_G0020534.1 mouse_genomes_project 13 48314398 48359626 + MGP_129S1SvImJ_P0036969 Bicd2 protein_coding protein_coding MGP_129S1SvImJ_T0036970.1 MGP_129S1SvImJ_G0020534.1 mouse_genomes_project 13 48314398 48359626 + MGP_129S1SvImJ_P0036970 Bicd2 protein_coding protein_coding MGP_129S1SvImJ_T0036526.1 MGP_129S1SvImJ_G0020354.1 mouse_genomes_project 13 21053637 21056012 - MGP_129S1SvImJ_P0036526 Hist1h1e protein_coding protein_coding MGP_129S1SvImJ_T0012931.1 MGP_129S1SvImJ_G0011020.1 mouse_genomes_project 13 43873969 43874972 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012875.1 MGP_129S1SvImJ_G0010964.1 mouse_genomes_project 13 741170 741461 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036225.1 MGP_129S1SvImJ_G0020214.1 mouse_genomes_project 13 3118720 3154318 + MGP_129S1SvImJ_P0036225 Pitrm1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0036226.1 MGP_129S1SvImJ_G0020214.1 mouse_genomes_project 13 3118754 3154273 + MGP_129S1SvImJ_P0036226 Pitrm1 protein_coding protein_coding MGP_129S1SvImJ_T0037247.1 MGP_129S1SvImJ_G0020619.1 mouse_genomes_project 13 56030839 56033803 - MGP_129S1SvImJ_P0037247 Il9 protein_coding protein_coding MGP_129S1SvImJ_T0036886.1 MGP_129S1SvImJ_G0020507.1 mouse_genomes_project 13 44088017 44113303 + MGP_129S1SvImJ_P0036886 Mylip protein_coding protein_coding MGP_129S1SvImJ_T0036485.1 MGP_129S1SvImJ_G0020321.1 mouse_genomes_project 13 19801641 19802544 + MGP_129S1SvImJ_P0036485 Vmn1r201 protein_coding protein_coding MGP_129S1SvImJ_T0009964.1 MGP_129S1SvImJ_G0008080.1 mouse_genomes_project 13 63261300 63261368 + Mir24-1 miRNA miRNA MGP_129S1SvImJ_T0038084.1 MGP_129S1SvImJ_G0020910.1 mouse_genomes_project 13 106904623 106953197 + Srek1ip1 protein_coding processed_transcript MGP_129S1SvImJ_T0038086.1 MGP_129S1SvImJ_G0020910.1 mouse_genomes_project 13 106930722 106954111 + MGP_129S1SvImJ_P0038086 Srek1ip1 protein_coding protein_coding MGP_129S1SvImJ_T0038087.1 MGP_129S1SvImJ_G0020910.1 mouse_genomes_project 13 106930784 106953506 + MGP_129S1SvImJ_P0038087 Srek1ip1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038088.1 MGP_129S1SvImJ_G0020910.1 mouse_genomes_project 13 106940200 106948514 + Srek1ip1 protein_coding retained_intron MGP_129S1SvImJ_T0038089.1 MGP_129S1SvImJ_G0020910.1 mouse_genomes_project 13 106948290 106954108 + Srek1ip1 protein_coding retained_intron MGP_129S1SvImJ_T0037359.1 MGP_129S1SvImJ_G0020653.1 mouse_genomes_project 13 60678569 60681716 - MGP_129S1SvImJ_P0037359 Tpbpb protein_coding protein_coding MGP_129S1SvImJ_T0037988.1 MGP_129S1SvImJ_G0020885.1 mouse_genomes_project 13 102381864 102414584 - MGP_129S1SvImJ_P0037988 Gtf2h2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037989.1 MGP_129S1SvImJ_G0020885.1 mouse_genomes_project 13 102382053 102414799 - MGP_129S1SvImJ_P0037989 Gtf2h2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0037990.1 MGP_129S1SvImJ_G0020885.1 mouse_genomes_project 13 102390236 102414807 - MGP_129S1SvImJ_P0037990 Gtf2h2 protein_coding protein_coding MGP_129S1SvImJ_T0037991.1 MGP_129S1SvImJ_G0020885.1 mouse_genomes_project 13 102390464 102414613 - Gtf2h2 protein_coding retained_intron MGP_129S1SvImJ_T0037992.1 MGP_129S1SvImJ_G0020885.1 mouse_genomes_project 13 102390464 102414825 - MGP_129S1SvImJ_P0037992 Gtf2h2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037993.1 MGP_129S1SvImJ_G0020885.1 mouse_genomes_project 13 102399360 102402975 - Gtf2h2 protein_coding processed_transcript MGP_129S1SvImJ_T0037994.1 MGP_129S1SvImJ_G0020885.1 mouse_genomes_project 13 102401449 102403893 - Gtf2h2 protein_coding processed_transcript MGP_129S1SvImJ_T0037995.1 MGP_129S1SvImJ_G0020885.1 mouse_genomes_project 13 102403772 102414825 - MGP_129S1SvImJ_P0037995 Gtf2h2 protein_coding protein_coding MGP_129S1SvImJ_T0037996.1 MGP_129S1SvImJ_G0020885.1 mouse_genomes_project 13 102409936 102414620 - Gtf2h2 protein_coding retained_intron MGP_129S1SvImJ_T0037997.1 MGP_129S1SvImJ_G0020885.1 mouse_genomes_project 13 102411028 102414799 - Gtf2h2 protein_coding processed_transcript MGP_129S1SvImJ_T0011368.1 MGP_129S1SvImJ_G0009484.1 mouse_genomes_project 13 13879963 13880251 - Gm26098 misc_RNA misc_RNA MGP_129S1SvImJ_T0036921.1 MGP_129S1SvImJ_G0020520.1 mouse_genomes_project 13 45894053 45907723 - Dek protein_coding processed_transcript MGP_129S1SvImJ_T0036922.1 MGP_129S1SvImJ_G0020520.1 mouse_genomes_project 13 45894060 45915460 - MGP_129S1SvImJ_P0036922 Dek protein_coding protein_coding MGP_129S1SvImJ_T0036923.1 MGP_129S1SvImJ_G0020520.1 mouse_genomes_project 13 45897875 45915471 - MGP_129S1SvImJ_P0036923 Dek protein_coding protein_coding MGP_129S1SvImJ_T0036924.1 MGP_129S1SvImJ_G0020520.1 mouse_genomes_project 13 45907439 45915100 - MGP_129S1SvImJ_P0036924 Dek protein_coding protein_coding MGP_129S1SvImJ_T0036925.1 MGP_129S1SvImJ_G0020520.1 mouse_genomes_project 13 45910760 45915424 - Dek protein_coding processed_transcript MGP_129S1SvImJ_T0036926.1 MGP_129S1SvImJ_G0020520.1 mouse_genomes_project 13 45914655 45915453 - Dek protein_coding processed_transcript MGP_129S1SvImJ_T0009954.1 MGP_129S1SvImJ_G0008070.1 mouse_genomes_project 13 54962858 54962954 - Mir6944 miRNA miRNA MGP_129S1SvImJ_T0036477.1 MGP_129S1SvImJ_G0020313.1 mouse_genomes_project 13 19553123 19554083 - MGP_129S1SvImJ_P0036477 Vmn1r193 protein_coding protein_coding MGP_129S1SvImJ_T0011367.1 MGP_129S1SvImJ_G0009483.1 mouse_genomes_project 13 10739125 10739415 + Gm25271 misc_RNA misc_RNA MGP_129S1SvImJ_T0012959.1 MGP_129S1SvImJ_G0011048.1 mouse_genomes_project 13 85613869 85615144 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036386.1 MGP_129S1SvImJ_G0020259.1 mouse_genomes_project 13 16766564 16796217 - MGP_129S1SvImJ_P0036386 Epdr1 protein_coding protein_coding MGP_129S1SvImJ_T0003468.1 MGP_129S1SvImJ_G0003181.1 mouse_genomes_project 13 32038881 32041628 + 1110046J04Rik antisense antisense MGP_129S1SvImJ_T0003469.1 MGP_129S1SvImJ_G0003181.1 mouse_genomes_project 13 32039134 32039916 + 1110046J04Rik antisense antisense MGP_129S1SvImJ_T0003470.1 MGP_129S1SvImJ_G0003181.1 mouse_genomes_project 13 32039317 32061320 + 1110046J04Rik antisense antisense MGP_129S1SvImJ_T0012911.1 MGP_129S1SvImJ_G0011000.1 mouse_genomes_project 13 24366563 24366985 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012942.1 MGP_129S1SvImJ_G0011031.1 mouse_genomes_project 13 67864031 67864812 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006576.1 MGP_129S1SvImJ_G0005459.1 mouse_genomes_project 13 46915004 47146186 - A330033J07Rik lincRNA lincRNA MGP_129S1SvImJ_T0006577.1 MGP_129S1SvImJ_G0005459.1 mouse_genomes_project 13 47122634 47145644 - A330033J07Rik lincRNA lincRNA MGP_129S1SvImJ_T0038080.1 MGP_129S1SvImJ_G0020908.1 mouse_genomes_project 13 106381685 106602876 + MGP_129S1SvImJ_P0038080 Adamts6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0036700.1 MGP_129S1SvImJ_G0020434.1 mouse_genomes_project 13 31168113 31180991 - MGP_129S1SvImJ_P0036700 Serpinb9c protein_coding protein_coding MGP_129S1SvImJ_T0036701.1 MGP_129S1SvImJ_G0020434.1 mouse_genomes_project 13 31168423 31179600 - MGP_129S1SvImJ_P0036701 Serpinb9c protein_coding protein_coding MGP_129S1SvImJ_T0036702.1 MGP_129S1SvImJ_G0020434.1 mouse_genomes_project 13 31177717 31179744 - MGP_129S1SvImJ_P0036702 Serpinb9c protein_coding protein_coding MGP_129S1SvImJ_T0037434.1 MGP_129S1SvImJ_G0020684.1 mouse_genomes_project 13 65059607 65067707 - MGP_129S1SvImJ_P0037434 Prss47 protein_coding protein_coding MGP_129S1SvImJ_T0037435.1 MGP_129S1SvImJ_G0020684.1 mouse_genomes_project 13 65059917 65066794 - MGP_129S1SvImJ_P0037435 Prss47 protein_coding protein_coding MGP_129S1SvImJ_T0036713.1 MGP_129S1SvImJ_G0020443.1 mouse_genomes_project 13 32021583 32105732 - MGP_129S1SvImJ_P0036713 Serpinb6a protein_coding protein_coding MGP_129S1SvImJ_T0036714.1 MGP_129S1SvImJ_G0020443.1 mouse_genomes_project 13 32021583 32039484 - MGP_129S1SvImJ_P0036714 Serpinb6a protein_coding protein_coding MGP_129S1SvImJ_T0036715.1 MGP_129S1SvImJ_G0020443.1 mouse_genomes_project 13 32021583 32039369 - MGP_129S1SvImJ_P0036715 Serpinb6a protein_coding protein_coding MGP_129S1SvImJ_T0036716.1 MGP_129S1SvImJ_G0020443.1 mouse_genomes_project 13 32021592 32039282 - MGP_129S1SvImJ_P0036716 Serpinb6a protein_coding protein_coding MGP_129S1SvImJ_T0036717.1 MGP_129S1SvImJ_G0020443.1 mouse_genomes_project 13 32021897 32025725 - Serpinb6a protein_coding processed_transcript MGP_129S1SvImJ_T0036718.1 MGP_129S1SvImJ_G0020443.1 mouse_genomes_project 13 32022455 32105732 - MGP_129S1SvImJ_P0036718 Serpinb6a protein_coding protein_coding MGP_129S1SvImJ_T0036719.1 MGP_129S1SvImJ_G0020443.1 mouse_genomes_project 13 32026591 32039190 - MGP_129S1SvImJ_P0036719 Serpinb6a protein_coding protein_coding MGP_129S1SvImJ_T0036720.1 MGP_129S1SvImJ_G0020443.1 mouse_genomes_project 13 32026607 32039241 - MGP_129S1SvImJ_P0036720 Serpinb6a protein_coding protein_coding MGP_129S1SvImJ_T0036721.1 MGP_129S1SvImJ_G0020443.1 mouse_genomes_project 13 32026684 32039163 - MGP_129S1SvImJ_P0036721 Serpinb6a protein_coding protein_coding MGP_129S1SvImJ_T0036722.1 MGP_129S1SvImJ_G0020443.1 mouse_genomes_project 13 32027289 32039264 - Serpinb6a protein_coding retained_intron MGP_129S1SvImJ_T0036723.1 MGP_129S1SvImJ_G0020443.1 mouse_genomes_project 13 32028979 32039263 - MGP_129S1SvImJ_P0036723 Serpinb6a protein_coding protein_coding MGP_129S1SvImJ_T0036724.1 MGP_129S1SvImJ_G0020443.1 mouse_genomes_project 13 32029051 32105705 - MGP_129S1SvImJ_P0036724 Serpinb6a protein_coding protein_coding MGP_129S1SvImJ_T0036725.1 MGP_129S1SvImJ_G0020443.1 mouse_genomes_project 13 32033440 32039240 - MGP_129S1SvImJ_P0036725 Serpinb6a protein_coding protein_coding MGP_129S1SvImJ_T0036726.1 MGP_129S1SvImJ_G0020443.1 mouse_genomes_project 13 32033453 32105724 - MGP_129S1SvImJ_P0036726 Serpinb6a protein_coding protein_coding MGP_129S1SvImJ_T0036727.1 MGP_129S1SvImJ_G0020443.1 mouse_genomes_project 13 32034897 32105678 - MGP_129S1SvImJ_P0036727 Serpinb6a protein_coding protein_coding MGP_129S1SvImJ_T0036730.1 MGP_129S1SvImJ_G0020443.1 mouse_genomes_project 13 32073994 32105705 - Serpinb6a protein_coding processed_transcript MGP_129S1SvImJ_T0036731.1 MGP_129S1SvImJ_G0020443.1 mouse_genomes_project 13 32089322 32105708 - Serpinb6a protein_coding processed_transcript MGP_129S1SvImJ_T0036633.1 MGP_129S1SvImJ_G0020400.1 mouse_genomes_project 13 25182832 25190553 - MGP_129S1SvImJ_P0036633 Prl8a9 protein_coding protein_coding MGP_129S1SvImJ_T0011380.1 MGP_129S1SvImJ_G0009496.1 mouse_genomes_project 13 100803977 100804226 - Gm24733 misc_RNA misc_RNA MGP_129S1SvImJ_T0102195.1 MGP_129S1SvImJ_G0040029.1 mouse_genomes_project 13 19820466 19821047 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0009950.1 MGP_129S1SvImJ_G0008066.1 mouse_genomes_project 13 49104517 49104625 + Mir683-2 miRNA miRNA MGP_129S1SvImJ_T0037819.1 MGP_129S1SvImJ_G0020824.1 mouse_genomes_project 13 94634930 94720351 + MGP_129S1SvImJ_P0037819 Homer1 protein_coding protein_coding MGP_129S1SvImJ_T0037820.1 MGP_129S1SvImJ_G0020824.1 mouse_genomes_project 13 94635275 94700787 + MGP_129S1SvImJ_P0037820 Homer1 protein_coding protein_coding MGP_129S1SvImJ_T0037821.1 MGP_129S1SvImJ_G0020824.1 mouse_genomes_project 13 94635668 94693686 + MGP_129S1SvImJ_P0037821 Homer1 protein_coding protein_coding MGP_129S1SvImJ_T0037822.1 MGP_129S1SvImJ_G0020824.1 mouse_genomes_project 13 94635973 94737963 + MGP_129S1SvImJ_P0037822 Homer1 protein_coding protein_coding MGP_129S1SvImJ_T0037823.1 MGP_129S1SvImJ_G0020824.1 mouse_genomes_project 13 94636277 94736552 + MGP_129S1SvImJ_P0037823 Homer1 protein_coding protein_coding MGP_129S1SvImJ_T0037824.1 MGP_129S1SvImJ_G0020824.1 mouse_genomes_project 13 94636277 94736552 + MGP_129S1SvImJ_P0037824 Homer1 protein_coding protein_coding MGP_129S1SvImJ_T0037825.1 MGP_129S1SvImJ_G0020824.1 mouse_genomes_project 13 94636333 94738072 + MGP_129S1SvImJ_P0037825 Homer1 protein_coding protein_coding MGP_129S1SvImJ_T0037826.1 MGP_129S1SvImJ_G0020824.1 mouse_genomes_project 13 94636358 94700059 + MGP_129S1SvImJ_P0037826 Homer1 protein_coding protein_coding MGP_129S1SvImJ_T0037827.1 MGP_129S1SvImJ_G0020824.1 mouse_genomes_project 13 94636452 94736588 + MGP_129S1SvImJ_P0037827 Homer1 protein_coding protein_coding MGP_129S1SvImJ_T0037828.1 MGP_129S1SvImJ_G0020824.1 mouse_genomes_project 13 94636452 94736588 + MGP_129S1SvImJ_P0037828 Homer1 protein_coding protein_coding MGP_129S1SvImJ_T0037829.1 MGP_129S1SvImJ_G0020824.1 mouse_genomes_project 13 94639210 94738411 + MGP_129S1SvImJ_P0037829 Homer1 protein_coding protein_coding MGP_129S1SvImJ_T0037830.1 MGP_129S1SvImJ_G0020824.1 mouse_genomes_project 13 94716990 94736511 + MGP_129S1SvImJ_P0037830 Homer1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0037620.1 MGP_129S1SvImJ_G0020774.1 mouse_genomes_project 13 76512157 76544857 + MGP_129S1SvImJ_P0037620 Spata9 protein_coding protein_coding MGP_129S1SvImJ_T0036770.1 MGP_129S1SvImJ_G0020462.1 mouse_genomes_project 13 34417095 34758108 + MGP_129S1SvImJ_P0036770 Fars2 protein_coding protein_coding MGP_129S1SvImJ_T0006552.1 MGP_129S1SvImJ_G0005442.1 mouse_genomes_project 13 29490051 29507093 - 1700018A04Rik lincRNA lincRNA MGP_129S1SvImJ_T0006553.1 MGP_129S1SvImJ_G0005442.1 mouse_genomes_project 13 29491955 29507101 - 1700018A04Rik lincRNA lincRNA MGP_129S1SvImJ_T0006554.1 MGP_129S1SvImJ_G0005442.1 mouse_genomes_project 13 29502874 29507101 - 1700018A04Rik lincRNA lincRNA MGP_129S1SvImJ_T0011365.1 MGP_129S1SvImJ_G0009481.1 mouse_genomes_project 13 9451811 9452108 + Gm23081 misc_RNA misc_RNA MGP_129S1SvImJ_T0006639.1 MGP_129S1SvImJ_G0005500.1 mouse_genomes_project 13 100874922 100881621 + Gm807 lincRNA lincRNA MGP_129S1SvImJ_T0006648.1 MGP_129S1SvImJ_G0005508.1 mouse_genomes_project 13 114025153 114056143 - Gm15290 lincRNA lincRNA MGP_129S1SvImJ_T0100657.1 MGP_129S1SvImJ_G0038724.1 mouse_genomes_project 13 107367184 107367314 - Gm25631 snoRNA snoRNA MGP_129S1SvImJ_T0037930.1 MGP_129S1SvImJ_G0020863.1 mouse_genomes_project 13 99960905 99971168 + MGP_129S1SvImJ_P0037930 Ankra2 protein_coding protein_coding MGP_129S1SvImJ_T0037931.1 MGP_129S1SvImJ_G0020863.1 mouse_genomes_project 13 99960947 99971651 + MGP_129S1SvImJ_P0037931 Ankra2 protein_coding protein_coding MGP_129S1SvImJ_T0037932.1 MGP_129S1SvImJ_G0020863.1 mouse_genomes_project 13 99960950 99971653 + MGP_129S1SvImJ_P0037932 Ankra2 protein_coding protein_coding MGP_129S1SvImJ_T0037933.1 MGP_129S1SvImJ_G0020863.1 mouse_genomes_project 13 99961015 99972485 + MGP_129S1SvImJ_P0037933 Ankra2 protein_coding protein_coding MGP_129S1SvImJ_T0037934.1 MGP_129S1SvImJ_G0020863.1 mouse_genomes_project 13 99966164 99969202 + Ankra2 protein_coding retained_intron MGP_129S1SvImJ_T0102200.1 MGP_129S1SvImJ_G0040034.1 mouse_genomes_project 13 20107243 20107787 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0003487.1 MGP_129S1SvImJ_G0003193.1 mouse_genomes_project 13 64269164 64288561 + 1810034E14Rik antisense antisense MGP_129S1SvImJ_T0003488.1 MGP_129S1SvImJ_G0003193.1 mouse_genomes_project 13 64269236 64286891 + 1810034E14Rik antisense antisense MGP_129S1SvImJ_T0003489.1 MGP_129S1SvImJ_G0003193.1 mouse_genomes_project 13 64286893 64288561 + 1810034E14Rik antisense antisense MGP_129S1SvImJ_T0012973.1 MGP_129S1SvImJ_G0011062.1 mouse_genomes_project 13 108728948 108729194 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0037787.1 MGP_129S1SvImJ_G0020812.1 mouse_genomes_project 13 93497663 93642115 - MGP_129S1SvImJ_P0037787 Msh3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0037788.1 MGP_129S1SvImJ_G0020812.1 mouse_genomes_project 13 93498373 93651721 - MGP_129S1SvImJ_P0037788 Msh3 protein_coding protein_coding MGP_129S1SvImJ_T0037789.1 MGP_129S1SvImJ_G0020812.1 mouse_genomes_project 13 93498381 93528355 - Msh3 protein_coding processed_transcript MGP_129S1SvImJ_T0037790.1 MGP_129S1SvImJ_G0020812.1 mouse_genomes_project 13 93498382 93554181 - Msh3 protein_coding retained_intron MGP_129S1SvImJ_T0037791.1 MGP_129S1SvImJ_G0020812.1 mouse_genomes_project 13 93498383 93651725 - MGP_129S1SvImJ_P0037791 Msh3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037792.1 MGP_129S1SvImJ_G0020812.1 mouse_genomes_project 13 93498387 93538275 - Msh3 protein_coding retained_intron MGP_129S1SvImJ_T0037793.1 MGP_129S1SvImJ_G0020812.1 mouse_genomes_project 13 93498387 93651729 - MGP_129S1SvImJ_P0037793 Msh3 protein_coding protein_coding MGP_129S1SvImJ_T0037794.1 MGP_129S1SvImJ_G0020812.1 mouse_genomes_project 13 93498758 93522825 - MGP_129S1SvImJ_P0037794 Msh3 protein_coding protein_coding MGP_129S1SvImJ_T0037795.1 MGP_129S1SvImJ_G0020812.1 mouse_genomes_project 13 93538055 93651711 - MGP_129S1SvImJ_P0037795 Msh3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037797.1 MGP_129S1SvImJ_G0020812.1 mouse_genomes_project 13 93599749 93601710 - Msh3 protein_coding retained_intron MGP_129S1SvImJ_T0037798.1 MGP_129S1SvImJ_G0020812.1 mouse_genomes_project 13 93601432 93651722 - MGP_129S1SvImJ_P0037798 Msh3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037799.1 MGP_129S1SvImJ_G0020812.1 mouse_genomes_project 13 93604904 93642442 - Msh3 protein_coding retained_intron MGP_129S1SvImJ_T0037800.1 MGP_129S1SvImJ_G0020812.1 mouse_genomes_project 13 93637735 93651241 - Msh3 protein_coding processed_transcript MGP_129S1SvImJ_T0037801.1 MGP_129S1SvImJ_G0020812.1 mouse_genomes_project 13 93642932 93651679 - Msh3 protein_coding retained_intron MGP_129S1SvImJ_T0037802.1 MGP_129S1SvImJ_G0020812.1 mouse_genomes_project 13 93647845 93651711 - MGP_129S1SvImJ_P0037802 Msh3 protein_coding protein_coding MGP_129S1SvImJ_T0036222.1 MGP_129S1SvImJ_G0020211.1 mouse_genomes_project 13 1278543 1352230 + MGP_129S1SvImJ_P0036222 Gm5444 protein_coding protein_coding MGP_129S1SvImJ_T0038160.1 MGP_129S1SvImJ_G0020932.1 mouse_genomes_project 13 113924464 113999345 - MGP_129S1SvImJ_P0038160 Gpbp1 protein_coding protein_coding MGP_129S1SvImJ_T0038161.1 MGP_129S1SvImJ_G0020932.1 mouse_genomes_project 13 113924716 113999262 - MGP_129S1SvImJ_P0038161 Gpbp1 protein_coding protein_coding MGP_129S1SvImJ_T0038162.1 MGP_129S1SvImJ_G0020932.1 mouse_genomes_project 13 113924942 113996946 - MGP_129S1SvImJ_P0038162 Gpbp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038163.1 MGP_129S1SvImJ_G0020932.1 mouse_genomes_project 13 113938735 113954088 - Gpbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0038164.1 MGP_129S1SvImJ_G0020932.1 mouse_genomes_project 13 113941336 113954047 - Gpbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0038165.1 MGP_129S1SvImJ_G0020932.1 mouse_genomes_project 13 113941406 113954088 - Gpbp1 protein_coding retained_intron MGP_129S1SvImJ_T0036351.1 MGP_129S1SvImJ_G0020245.1 mouse_genomes_project 13 11599816 11612739 + MGP_129S1SvImJ_P0036351 Psma2 protein_coding protein_coding MGP_129S1SvImJ_T0036739.1 MGP_129S1SvImJ_G0020449.1 mouse_genomes_project 13 32272858 32284232 + MGP_129S1SvImJ_P0036739 Psmg4 protein_coding protein_coding MGP_129S1SvImJ_T0036740.1 MGP_129S1SvImJ_G0020449.1 mouse_genomes_project 13 32272858 32284236 + MGP_129S1SvImJ_P0036740 Psmg4 protein_coding protein_coding MGP_129S1SvImJ_T0102213.1 MGP_129S1SvImJ_G0040047.1 mouse_genomes_project 13 21188302 21189397 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0036497.1 MGP_129S1SvImJ_G0020333.1 mouse_genomes_project 13 20485394 20486291 + MGP_129S1SvImJ_P0036497 Vmn1r216 protein_coding protein_coding MGP_129S1SvImJ_T0038228.1 MGP_129S1SvImJ_G0020959.1 mouse_genomes_project 13 117707111 117868022 - MGP_129S1SvImJ_P0038228 Itga1 protein_coding protein_coding MGP_129S1SvImJ_T0037422.1 MGP_129S1SvImJ_G0020675.1 mouse_genomes_project 13 64180368 64205870 + MGP_129S1SvImJ_P0037422 Habp4 protein_coding protein_coding MGP_129S1SvImJ_T0012945.1 MGP_129S1SvImJ_G0011034.1 mouse_genomes_project 13 69594552 69595548 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017374.1 MGP_129S1SvImJ_G0015247.1 mouse_genomes_project 13 19336167 19337727 + Gm11291 processed_transcript processed_transcript MGP_129S1SvImJ_T0037493.1 MGP_129S1SvImJ_G0020713.1 mouse_genomes_project 13 67640921 67650870 - MGP_129S1SvImJ_P0037493 Zfp58 protein_coding protein_coding MGP_129S1SvImJ_T0037494.1 MGP_129S1SvImJ_G0020713.1 mouse_genomes_project 13 67640922 67650922 - MGP_129S1SvImJ_P0037494 Zfp58 protein_coding protein_coding MGP_129S1SvImJ_T0037496.1 MGP_129S1SvImJ_G0020713.1 mouse_genomes_project 13 67642406 67650854 - MGP_129S1SvImJ_P0037496 Zfp58 protein_coding protein_coding MGP_129S1SvImJ_T0037497.1 MGP_129S1SvImJ_G0020713.1 mouse_genomes_project 13 67642621 67650811 - MGP_129S1SvImJ_P0037497 Zfp58 protein_coding protein_coding MGP_129S1SvImJ_T0036895.1 MGP_129S1SvImJ_G0020511.1 mouse_genomes_project 13 45041976 45068383 + MGP_129S1SvImJ_P0036895 Stmnd1 protein_coding protein_coding MGP_129S1SvImJ_T0037949.1 MGP_129S1SvImJ_G0020870.1 mouse_genomes_project 13 100461130 100567200 - MGP_129S1SvImJ_P0037949 Fcho2 protein_coding protein_coding MGP_129S1SvImJ_T0037950.1 MGP_129S1SvImJ_G0020870.1 mouse_genomes_project 13 100461130 100567200 - MGP_129S1SvImJ_P0037950 Fcho2 protein_coding protein_coding MGP_129S1SvImJ_T0037951.1 MGP_129S1SvImJ_G0020870.1 mouse_genomes_project 13 100492553 100567200 - MGP_129S1SvImJ_P0037951 Fcho2 protein_coding protein_coding MGP_129S1SvImJ_T0037952.1 MGP_129S1SvImJ_G0020870.1 mouse_genomes_project 13 100494519 100567200 - MGP_129S1SvImJ_P0037952 Fcho2 protein_coding protein_coding MGP_129S1SvImJ_T0002610.1 MGP_129S1SvImJ_G0002511.1 mouse_genomes_project 13 16295415 16295948 + MGP_129S1SvImJ_P0002610 Tcrg-V4 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0036569.1 MGP_129S1SvImJ_G0020377.1 mouse_genomes_project 13 21841846 21941083 + MGP_129S1SvImJ_P0036569 Cmah protein_coding protein_coding MGP_129S1SvImJ_T0036570.1 MGP_129S1SvImJ_G0020377.1 mouse_genomes_project 13 21863032 21903127 + Cmah protein_coding processed_transcript MGP_129S1SvImJ_T0036571.1 MGP_129S1SvImJ_G0020377.1 mouse_genomes_project 13 21884492 21902686 + Cmah protein_coding processed_transcript MGP_129S1SvImJ_T0036572.1 MGP_129S1SvImJ_G0020377.1 mouse_genomes_project 13 21884815 21904096 + Cmah protein_coding processed_transcript MGP_129S1SvImJ_T0012882.1 MGP_129S1SvImJ_G0010971.1 mouse_genomes_project 13 16576242 16576691 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009958.1 MGP_129S1SvImJ_G0008074.1 mouse_genomes_project 13 58032942 58033050 - Mir7-1 miRNA miRNA MGP_129S1SvImJ_T0037638.1 MGP_129S1SvImJ_G0020780.1 mouse_genomes_project 13 77605889 77699311 - MGP_129S1SvImJ_P0037638 Slf1 protein_coding protein_coding MGP_129S1SvImJ_T0037639.1 MGP_129S1SvImJ_G0020780.1 mouse_genomes_project 13 77606774 77610195 - Slf1 protein_coding retained_intron MGP_129S1SvImJ_T0037640.1 MGP_129S1SvImJ_G0020780.1 mouse_genomes_project 13 77664765 77699303 - MGP_129S1SvImJ_P0037640 Slf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037641.1 MGP_129S1SvImJ_G0020780.1 mouse_genomes_project 13 77667399 77699303 - MGP_129S1SvImJ_P0037641 Slf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037642.1 MGP_129S1SvImJ_G0020780.1 mouse_genomes_project 13 77668357 77696166 - MGP_129S1SvImJ_P0037642 Slf1 protein_coding protein_coding MGP_129S1SvImJ_T0037643.1 MGP_129S1SvImJ_G0020780.1 mouse_genomes_project 13 77668443 77699276 - MGP_129S1SvImJ_P0037643 Slf1 protein_coding protein_coding MGP_129S1SvImJ_T0037644.1 MGP_129S1SvImJ_G0020780.1 mouse_genomes_project 13 77669384 77699298 - Slf1 protein_coding retained_intron MGP_129S1SvImJ_T0037960.1 MGP_129S1SvImJ_G0020876.1 mouse_genomes_project 13 101209190 101306976 - MGP_129S1SvImJ_P0037960 Map1b protein_coding protein_coding MGP_129S1SvImJ_T0036318.1 MGP_129S1SvImJ_G0020235.1 mouse_genomes_project 13 10038472 10043076 + MGP_129S1SvImJ_P0036318 protein_coding protein_coding MGP_129S1SvImJ_T0006649.1 MGP_129S1SvImJ_G0005509.1 mouse_genomes_project 13 114359977 114362284 - Gm15325 lincRNA lincRNA MGP_129S1SvImJ_T0003518.1 MGP_129S1SvImJ_G0003208.1 mouse_genomes_project 13 96662204 96662604 + antisense antisense MGP_129S1SvImJ_T0036809.1 MGP_129S1SvImJ_G0020479.1 mouse_genomes_project 13 39173803 39192216 - MGP_129S1SvImJ_P0036809 Tfap2a protein_coding protein_coding MGP_129S1SvImJ_T0036810.1 MGP_129S1SvImJ_G0020479.1 mouse_genomes_project 13 39174790 39196795 - MGP_129S1SvImJ_P0036810 Tfap2a protein_coding protein_coding MGP_129S1SvImJ_T0037433.1 MGP_129S1SvImJ_G0020683.1 mouse_genomes_project 13 65044276 65049197 + MGP_129S1SvImJ_P0037433 Spata31d1c protein_coding protein_coding MGP_129S1SvImJ_T0037525.1 MGP_129S1SvImJ_G0020732.1 mouse_genomes_project 13 69799164 69892789 + MGP_129S1SvImJ_P0037525 Nsun2 protein_coding protein_coding MGP_129S1SvImJ_T0037526.1 MGP_129S1SvImJ_G0020732.1 mouse_genomes_project 13 69799186 69883267 + Nsun2 protein_coding processed_transcript MGP_129S1SvImJ_T0037529.1 MGP_129S1SvImJ_G0020732.1 mouse_genomes_project 13 69889367 69911350 + MGP_129S1SvImJ_P0037529 Nsun2 protein_coding protein_coding MGP_129S1SvImJ_T0037530.1 MGP_129S1SvImJ_G0020732.1 mouse_genomes_project 13 69889411 69911153 + MGP_129S1SvImJ_P0037530 Nsun2 protein_coding protein_coding MGP_129S1SvImJ_T0037531.1 MGP_129S1SvImJ_G0020732.1 mouse_genomes_project 13 69889921 69896915 + Nsun2 protein_coding processed_transcript MGP_129S1SvImJ_T0037532.1 MGP_129S1SvImJ_G0020732.1 mouse_genomes_project 13 69898643 69906972 + Nsun2 protein_coding retained_intron MGP_129S1SvImJ_T0037533.1 MGP_129S1SvImJ_G0020732.1 mouse_genomes_project 13 69908082 69909011 + Nsun2 protein_coding retained_intron MGP_129S1SvImJ_T0037295.1 MGP_129S1SvImJ_G0020634.1 mouse_genomes_project 13 58042762 58051324 + MGP_129S1SvImJ_P0037295 Rmi1 protein_coding protein_coding MGP_129S1SvImJ_T0036431.1 MGP_129S1SvImJ_G0020282.1 mouse_genomes_project 13 18805848 18806902 - MGP_129S1SvImJ_P0036431 protein_coding protein_coding MGP_129S1SvImJ_T0036433.1 MGP_129S1SvImJ_G0020282.1 mouse_genomes_project 13 18806112 18811593 - MGP_129S1SvImJ_P0036433 protein_coding protein_coding MGP_129S1SvImJ_T0009969.1 MGP_129S1SvImJ_G0008085.1 mouse_genomes_project 13 84600662 84600734 + Mir9-2 miRNA miRNA MGP_129S1SvImJ_T0006562.1 MGP_129S1SvImJ_G0005448.1 mouse_genomes_project 13 35712483 35713480 - Gm29458 lincRNA lincRNA MGP_129S1SvImJ_T0037515.1 MGP_129S1SvImJ_G0020725.1 mouse_genomes_project 13 67993065 67994088 + MGP_129S1SvImJ_P0037515 protein_coding protein_coding MGP_129S1SvImJ_T0012925.1 MGP_129S1SvImJ_G0011014.1 mouse_genomes_project 13 31661421 31661768 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0037427.1 MGP_129S1SvImJ_G0020677.1 mouse_genomes_project 13 64315872 64336736 - MGP_129S1SvImJ_P0037427 Aaed1 protein_coding protein_coding MGP_129S1SvImJ_T0037348.1 MGP_129S1SvImJ_G0020645.1 mouse_genomes_project 13 59485641 59539485 - MGP_129S1SvImJ_P0037348 Zcchc6 protein_coding protein_coding MGP_129S1SvImJ_T0037349.1 MGP_129S1SvImJ_G0020645.1 mouse_genomes_project 13 59486554 59539542 - MGP_129S1SvImJ_P0037349 Zcchc6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0037032.1 MGP_129S1SvImJ_G0020556.1 mouse_genomes_project 13 51778621 51807627 - MGP_129S1SvImJ_P0037032 Diras2 protein_coding protein_coding MGP_129S1SvImJ_T0037200.1 MGP_129S1SvImJ_G0020600.1 mouse_genomes_project 13 54985277 55002955 - MGP_129S1SvImJ_P0037200 Pdlim7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037201.1 MGP_129S1SvImJ_G0020600.1 mouse_genomes_project 13 54986973 55002951 - Pdlim7 protein_coding retained_intron MGP_129S1SvImJ_T0037202.1 MGP_129S1SvImJ_G0020600.1 mouse_genomes_project 13 54987895 55002954 - Pdlim7 protein_coding retained_intron MGP_129S1SvImJ_T0037203.1 MGP_129S1SvImJ_G0020600.1 mouse_genomes_project 13 54987899 55002963 - MGP_129S1SvImJ_P0037203 Pdlim7 protein_coding protein_coding MGP_129S1SvImJ_T0037204.1 MGP_129S1SvImJ_G0020600.1 mouse_genomes_project 13 54988131 54995890 - MGP_129S1SvImJ_P0037204 Pdlim7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0037205.1 MGP_129S1SvImJ_G0020600.1 mouse_genomes_project 13 54996247 55002955 - MGP_129S1SvImJ_P0037205 Pdlim7 protein_coding protein_coding MGP_129S1SvImJ_T0037206.1 MGP_129S1SvImJ_G0020600.1 mouse_genomes_project 13 54996248 55002955 - MGP_129S1SvImJ_P0037206 Pdlim7 protein_coding protein_coding MGP_129S1SvImJ_T0037207.1 MGP_129S1SvImJ_G0020600.1 mouse_genomes_project 13 54996248 55002951 - MGP_129S1SvImJ_P0037207 Pdlim7 protein_coding protein_coding MGP_129S1SvImJ_T0037208.1 MGP_129S1SvImJ_G0020600.1 mouse_genomes_project 13 54997026 54998537 - Pdlim7 protein_coding retained_intron MGP_129S1SvImJ_T0037209.1 MGP_129S1SvImJ_G0020600.1 mouse_genomes_project 13 54997707 55003193 - MGP_129S1SvImJ_P0037209 Pdlim7 protein_coding protein_coding MGP_129S1SvImJ_T0037210.1 MGP_129S1SvImJ_G0020600.1 mouse_genomes_project 13 54998326 55002938 - Pdlim7 protein_coding retained_intron MGP_129S1SvImJ_T0037211.1 MGP_129S1SvImJ_G0020600.1 mouse_genomes_project 13 54998482 55002226 - MGP_129S1SvImJ_P0037211 Pdlim7 protein_coding protein_coding MGP_129S1SvImJ_T0038258.1 MGP_129S1SvImJ_G0020972.1 mouse_genomes_project 13 122512215 122513533 - MGP_129S1SvImJ_P0038258 protein_coding protein_coding MGP_129S1SvImJ_T0037832.1 MGP_129S1SvImJ_G0020826.1 mouse_genomes_project 13 94973298 94994997 - MGP_129S1SvImJ_P0037832 Bhmt protein_coding protein_coding MGP_129S1SvImJ_T0037833.1 MGP_129S1SvImJ_G0020826.1 mouse_genomes_project 13 94978769 94994602 - Bhmt protein_coding retained_intron MGP_129S1SvImJ_T0002617.1 MGP_129S1SvImJ_G0002515.1 mouse_genomes_project 13 16485320 16488195 - MGP_129S1SvImJ_P0002617 Trgv2 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0036309.1 MGP_129S1SvImJ_G0020231.1 mouse_genomes_project 13 9200897 9220120 - MGP_129S1SvImJ_P0036309 Lgals8 protein_coding protein_coding MGP_129S1SvImJ_T0036310.1 MGP_129S1SvImJ_G0020231.1 mouse_genomes_project 13 9200902 9209740 - Lgals8 protein_coding retained_intron MGP_129S1SvImJ_T0036311.1 MGP_129S1SvImJ_G0020231.1 mouse_genomes_project 13 9202328 9222399 - MGP_129S1SvImJ_P0036311 Lgals8 protein_coding protein_coding MGP_129S1SvImJ_T0036312.1 MGP_129S1SvImJ_G0020231.1 mouse_genomes_project 13 9212420 9217519 - Lgals8 protein_coding retained_intron MGP_129S1SvImJ_T0036313.1 MGP_129S1SvImJ_G0020231.1 mouse_genomes_project 13 9213738 9216009 - Lgals8 protein_coding retained_intron MGP_129S1SvImJ_T0036314.1 MGP_129S1SvImJ_G0020231.1 mouse_genomes_project 13 9220175 9221951 - Lgals8 protein_coding processed_transcript MGP_129S1SvImJ_T0037495.1 MGP_129S1SvImJ_G0020714.1 mouse_genomes_project 13 67641911 67677929 - MGP_129S1SvImJ_P0037495 Gm26965 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0006653.1 MGP_129S1SvImJ_G0005512.1 mouse_genomes_project 13 114505956 114511212 + Gm15322 lincRNA lincRNA MGP_129S1SvImJ_T0036636.1 MGP_129S1SvImJ_G0020402.1 mouse_genomes_project 13 25225895 25235541 - MGP_129S1SvImJ_P0036636 Prl7b1 protein_coding protein_coding MGP_129S1SvImJ_T0036537.1 MGP_129S1SvImJ_G0020363.1 mouse_genomes_project 13 21196237 21196800 + MGP_129S1SvImJ_P0036537 Hist1h3b protein_coding protein_coding MGP_129S1SvImJ_T0036658.1 MGP_129S1SvImJ_G0020411.1 mouse_genomes_project 13 27747208 27829471 - MGP_129S1SvImJ_P0036658 E2f3 protein_coding protein_coding MGP_129S1SvImJ_T0036659.1 MGP_129S1SvImJ_G0020411.1 mouse_genomes_project 13 27759417 27828024 - MGP_129S1SvImJ_P0036659 E2f3 protein_coding protein_coding MGP_129S1SvImJ_T0006561.1 MGP_129S1SvImJ_G0005447.1 mouse_genomes_project 13 35709713 35711424 - Gm29459 lincRNA lincRNA MGP_129S1SvImJ_T0009953.1 MGP_129S1SvImJ_G0008069.1 mouse_genomes_project 13 54938260 54938326 + Mir6943 miRNA miRNA MGP_129S1SvImJ_T0036896.1 MGP_129S1SvImJ_G0020512.1 mouse_genomes_project 13 45183411 45198587 + MGP_129S1SvImJ_P0036896 Rbm24 protein_coding protein_coding MGP_129S1SvImJ_T0037352.1 MGP_129S1SvImJ_G0020648.1 mouse_genomes_project 13 60375130 60544667 + MGP_129S1SvImJ_P0037352 Dapk1 protein_coding protein_coding MGP_129S1SvImJ_T0037353.1 MGP_129S1SvImJ_G0020648.1 mouse_genomes_project 13 60375394 60544667 + MGP_129S1SvImJ_P0037353 Dapk1 protein_coding protein_coding MGP_129S1SvImJ_T0006547.1 MGP_129S1SvImJ_G0005439.1 mouse_genomes_project 13 29267401 29285095 - G630018N14Rik lincRNA lincRNA MGP_129S1SvImJ_T0006548.1 MGP_129S1SvImJ_G0005439.1 mouse_genomes_project 13 29278420 29283717 - G630018N14Rik lincRNA lincRNA MGP_129S1SvImJ_T0100658.1 MGP_129S1SvImJ_G0038725.1 mouse_genomes_project 13 109186971 109187037 - Gm24431 snoRNA snoRNA MGP_129S1SvImJ_T0102209.1 MGP_129S1SvImJ_G0040043.1 mouse_genomes_project 13 20608103 20609264 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102190.1 MGP_129S1SvImJ_G0040024.1 mouse_genomes_project 13 19631165 19632032 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0037542.1 MGP_129S1SvImJ_G0020739.1 mouse_genomes_project 13 72306688 72312498 - MGP_129S1SvImJ_P0037542 Irx1 protein_coding protein_coding MGP_129S1SvImJ_T0006524.1 MGP_129S1SvImJ_G0005421.1 mouse_genomes_project 13 6047659 6052266 + Gm26601 lincRNA lincRNA MGP_129S1SvImJ_T0036397.1 MGP_129S1SvImJ_G0020265.1 mouse_genomes_project 13 18020629 18261671 + MGP_129S1SvImJ_P0036397 Aoah protein_coding protein_coding MGP_129S1SvImJ_T0000909.1 MGP_129S1SvImJ_G0000841.1 mouse_genomes_project 13 69252142 69253660 + TEC TEC MGP_129S1SvImJ_T0037521.1 MGP_129S1SvImJ_G0020729.1 mouse_genomes_project 13 68813622 68830328 + MGP_129S1SvImJ_P0037521 1700001L19Rik protein_coding protein_coding MGP_129S1SvImJ_T0036363.1 MGP_129S1SvImJ_G0020252.1 mouse_genomes_project 13 14771418 14867417 - MGP_129S1SvImJ_P0036363 Cdk13 protein_coding protein_coding MGP_129S1SvImJ_T0037441.1 MGP_129S1SvImJ_G0020688.1 mouse_genomes_project 13 65204195 65227516 - MGP_129S1SvImJ_P0037441 Nlrp4f protein_coding protein_coding MGP_129S1SvImJ_T0098490.1 MGP_129S1SvImJ_G0036575.1 mouse_genomes_project 13 116040502 116040603 + Gm22385 rRNA rRNA MGP_129S1SvImJ_T0000913.1 MGP_129S1SvImJ_G0000845.1 mouse_genomes_project 13 86352308 86352547 - TEC TEC MGP_129S1SvImJ_T0036867.1 MGP_129S1SvImJ_G0020504.1 mouse_genomes_project 13 43403725 43405819 + Jarid2 protein_coding processed_transcript MGP_129S1SvImJ_T0036868.1 MGP_129S1SvImJ_G0020504.1 mouse_genomes_project 13 43403786 43531982 + MGP_129S1SvImJ_P0036868 Jarid2 protein_coding protein_coding MGP_129S1SvImJ_T0036869.1 MGP_129S1SvImJ_G0020504.1 mouse_genomes_project 13 43404046 43504819 + MGP_129S1SvImJ_P0036869 Jarid2 protein_coding protein_coding MGP_129S1SvImJ_T0036870.1 MGP_129S1SvImJ_G0020504.1 mouse_genomes_project 13 43405025 43607203 + MGP_129S1SvImJ_P0036870 Jarid2 protein_coding protein_coding MGP_129S1SvImJ_T0036871.1 MGP_129S1SvImJ_G0020504.1 mouse_genomes_project 13 43405074 43608091 + MGP_129S1SvImJ_P0036871 Jarid2 protein_coding protein_coding MGP_129S1SvImJ_T0036872.1 MGP_129S1SvImJ_G0020504.1 mouse_genomes_project 13 43405089 43590427 + MGP_129S1SvImJ_P0036872 Jarid2 protein_coding protein_coding MGP_129S1SvImJ_T0036873.1 MGP_129S1SvImJ_G0020504.1 mouse_genomes_project 13 43405110 43561652 + Jarid2 protein_coding processed_transcript MGP_129S1SvImJ_T0036874.1 MGP_129S1SvImJ_G0020504.1 mouse_genomes_project 13 43405516 43608739 + MGP_129S1SvImJ_P0036874 Jarid2 protein_coding protein_coding MGP_129S1SvImJ_T0036875.1 MGP_129S1SvImJ_G0020504.1 mouse_genomes_project 13 43405532 43504712 + MGP_129S1SvImJ_P0036875 Jarid2 protein_coding protein_coding MGP_129S1SvImJ_T0036876.1 MGP_129S1SvImJ_G0020504.1 mouse_genomes_project 13 43405613 43572221 + Jarid2 protein_coding retained_intron MGP_129S1SvImJ_T0036877.1 MGP_129S1SvImJ_G0020504.1 mouse_genomes_project 13 43405615 43608736 + Jarid2 protein_coding retained_intron MGP_129S1SvImJ_T0036878.1 MGP_129S1SvImJ_G0020504.1 mouse_genomes_project 13 43405842 43571941 + MGP_129S1SvImJ_P0036878 Jarid2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036879.1 MGP_129S1SvImJ_G0020504.1 mouse_genomes_project 13 43406103 43561643 + Jarid2 protein_coding processed_transcript MGP_129S1SvImJ_T0036880.1 MGP_129S1SvImJ_G0020504.1 mouse_genomes_project 13 43409352 43561615 + Jarid2 protein_coding processed_transcript MGP_129S1SvImJ_T0036881.1 MGP_129S1SvImJ_G0020504.1 mouse_genomes_project 13 43524742 43601414 + MGP_129S1SvImJ_P0036881 Jarid2 protein_coding protein_coding MGP_129S1SvImJ_T0036882.1 MGP_129S1SvImJ_G0020504.1 mouse_genomes_project 13 43524834 43583650 + MGP_129S1SvImJ_P0036882 Jarid2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037518.1 MGP_129S1SvImJ_G0020726.1 mouse_genomes_project 13 68056091 68056689 + MGP_129S1SvImJ_P0037518 BC048507 protein_coding protein_coding MGP_129S1SvImJ_T0036543.1 MGP_129S1SvImJ_G0020369.1 mouse_genomes_project 13 21253271 21269685 + Slc17a2 protein_coding retained_intron MGP_129S1SvImJ_T0036544.1 MGP_129S1SvImJ_G0020369.1 mouse_genomes_project 13 21253305 21271460 + MGP_129S1SvImJ_P0036544 Slc17a2 protein_coding protein_coding MGP_129S1SvImJ_T0036545.1 MGP_129S1SvImJ_G0020369.1 mouse_genomes_project 13 21253323 21269456 + Slc17a2 protein_coding retained_intron MGP_129S1SvImJ_T0036546.1 MGP_129S1SvImJ_G0020369.1 mouse_genomes_project 13 21253326 21269037 + MGP_129S1SvImJ_P0036546 Slc17a2 protein_coding protein_coding MGP_129S1SvImJ_T0009927.1 MGP_129S1SvImJ_G0008043.1 mouse_genomes_project 13 5541831 5541934 - Gm22750 miRNA miRNA MGP_129S1SvImJ_T0000908.1 MGP_129S1SvImJ_G0000840.1 mouse_genomes_project 13 67598481 67600315 + TEC TEC MGP_129S1SvImJ_T0036270.1 MGP_129S1SvImJ_G0020223.1 mouse_genomes_project 13 5730267 5810958 + MGP_129S1SvImJ_P0036270 Larp4b protein_coding protein_coding MGP_129S1SvImJ_T0036271.1 MGP_129S1SvImJ_G0020223.1 mouse_genomes_project 13 5730293 5811150 + MGP_129S1SvImJ_P0036271 Larp4b protein_coding protein_coding MGP_129S1SvImJ_T0036272.1 MGP_129S1SvImJ_G0020223.1 mouse_genomes_project 13 5730298 5760320 + MGP_129S1SvImJ_P0036272 Larp4b protein_coding protein_coding MGP_129S1SvImJ_T0036273.1 MGP_129S1SvImJ_G0020223.1 mouse_genomes_project 13 5730368 5814317 + MGP_129S1SvImJ_P0036273 Larp4b protein_coding protein_coding MGP_129S1SvImJ_T0036274.1 MGP_129S1SvImJ_G0020223.1 mouse_genomes_project 13 5775323 5783627 + Larp4b protein_coding processed_transcript MGP_129S1SvImJ_T0036275.1 MGP_129S1SvImJ_G0020223.1 mouse_genomes_project 13 5808214 5812998 + Larp4b protein_coding retained_intron MGP_129S1SvImJ_T0009952.1 MGP_129S1SvImJ_G0008068.1 mouse_genomes_project 13 53982488 53982625 + Gm24195 miRNA miRNA MGP_129S1SvImJ_T0006575.1 MGP_129S1SvImJ_G0005458.1 mouse_genomes_project 13 46824079 46886237 - 4931429P17Rik lincRNA lincRNA MGP_129S1SvImJ_T0036610.1 MGP_129S1SvImJ_G0020388.1 mouse_genomes_project 13 22760737 22781218 - MGP_129S1SvImJ_P0036610 Nrsn1 protein_coding protein_coding MGP_129S1SvImJ_T0036611.1 MGP_129S1SvImJ_G0020388.1 mouse_genomes_project 13 22760889 22773821 - MGP_129S1SvImJ_P0036611 Nrsn1 protein_coding protein_coding MGP_129S1SvImJ_T0036612.1 MGP_129S1SvImJ_G0020388.1 mouse_genomes_project 13 22762105 22773818 - Nrsn1 protein_coding processed_transcript MGP_129S1SvImJ_T0036613.1 MGP_129S1SvImJ_G0020388.1 mouse_genomes_project 13 22781170 22781638 - Nrsn1 protein_coding processed_transcript MGP_129S1SvImJ_T0012913.1 MGP_129S1SvImJ_G0011002.1 mouse_genomes_project 13 24924808 24925149 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0037093.1 MGP_129S1SvImJ_G0020575.1 mouse_genomes_project 13 54027935 54073416 + MGP_129S1SvImJ_P0037093 Faf2 protein_coding protein_coding MGP_129S1SvImJ_T0037094.1 MGP_129S1SvImJ_G0020575.1 mouse_genomes_project 13 54027955 54050888 + MGP_129S1SvImJ_P0037094 Faf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037095.1 MGP_129S1SvImJ_G0020575.1 mouse_genomes_project 13 54027975 54070934 + MGP_129S1SvImJ_P0037095 Faf2 protein_coding protein_coding MGP_129S1SvImJ_T0037096.1 MGP_129S1SvImJ_G0020575.1 mouse_genomes_project 13 54027986 54057776 + MGP_129S1SvImJ_P0037096 Faf2 protein_coding protein_coding MGP_129S1SvImJ_T0037097.1 MGP_129S1SvImJ_G0020575.1 mouse_genomes_project 13 54027986 54057665 + MGP_129S1SvImJ_P0037097 Faf2 protein_coding protein_coding MGP_129S1SvImJ_T0037098.1 MGP_129S1SvImJ_G0020575.1 mouse_genomes_project 13 54027989 54065707 + MGP_129S1SvImJ_P0037098 Faf2 protein_coding protein_coding MGP_129S1SvImJ_T0037099.1 MGP_129S1SvImJ_G0020575.1 mouse_genomes_project 13 54050890 54064869 + MGP_129S1SvImJ_P0037099 Faf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037100.1 MGP_129S1SvImJ_G0020575.1 mouse_genomes_project 13 54060788 54064894 + Faf2 protein_coding retained_intron MGP_129S1SvImJ_T0011369.1 MGP_129S1SvImJ_G0009485.1 mouse_genomes_project 13 32383446 32383734 - Gm24530 misc_RNA misc_RNA MGP_129S1SvImJ_T0036201.1 MGP_129S1SvImJ_G0020202.1 mouse_genomes_project 13 537284 568070 + MGP_129S1SvImJ_P0036201 Akr1c14 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0036202.1 MGP_129S1SvImJ_G0020202.1 mouse_genomes_project 13 556322 568076 + Akr1c14 protein_coding processed_transcript MGP_129S1SvImJ_T0037520.1 MGP_129S1SvImJ_G0020728.1 mouse_genomes_project 13 68798419 68808470 + MGP_129S1SvImJ_P0037520 Fastkd3 protein_coding protein_coding MGP_129S1SvImJ_T0012953.1 MGP_129S1SvImJ_G0011042.1 mouse_genomes_project 13 77265031 77266324 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102002.1 MGP_129S1SvImJ_G0039862.1 mouse_genomes_project 13 114225923 114228779 - unitary_pseudogene unitary_pseudogene MGP_129S1SvImJ_T0036508.1 MGP_129S1SvImJ_G0020341.1 mouse_genomes_project 13 20827237 20829561 - MGP_129S1SvImJ_P0036508 Abt1 protein_coding protein_coding MGP_129S1SvImJ_T0003479.1 MGP_129S1SvImJ_G0003190.1 mouse_genomes_project 13 55283754 55289896 - 4930451E10Rik antisense antisense MGP_129S1SvImJ_T0003480.1 MGP_129S1SvImJ_G0003190.1 mouse_genomes_project 13 55284558 55289881 - 4930451E10Rik antisense antisense MGP_129S1SvImJ_T0003481.1 MGP_129S1SvImJ_G0003190.1 mouse_genomes_project 13 55284565 55289907 - 4930451E10Rik antisense antisense MGP_129S1SvImJ_T0038180.1 MGP_129S1SvImJ_G0020936.1 mouse_genomes_project 13 115025883 115066241 + MGP_129S1SvImJ_P0038180 Il6st protein_coding protein_coding MGP_129S1SvImJ_T0038181.1 MGP_129S1SvImJ_G0020936.1 mouse_genomes_project 13 115025884 115045498 + MGP_129S1SvImJ_P0038181 Il6st protein_coding protein_coding MGP_129S1SvImJ_T0038182.1 MGP_129S1SvImJ_G0020936.1 mouse_genomes_project 13 115026013 115066341 + MGP_129S1SvImJ_P0038182 Il6st protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038183.1 MGP_129S1SvImJ_G0020936.1 mouse_genomes_project 13 115029355 115041736 + MGP_129S1SvImJ_P0038183 Il6st protein_coding protein_coding MGP_129S1SvImJ_T0038184.1 MGP_129S1SvImJ_G0020936.1 mouse_genomes_project 13 115036758 115066241 + MGP_129S1SvImJ_P0038184 Il6st protein_coding protein_coding MGP_129S1SvImJ_T0038185.1 MGP_129S1SvImJ_G0020936.1 mouse_genomes_project 13 115036758 115065555 + MGP_129S1SvImJ_P0038185 Il6st protein_coding protein_coding MGP_129S1SvImJ_T0038186.1 MGP_129S1SvImJ_G0020936.1 mouse_genomes_project 13 115036758 115065555 + MGP_129S1SvImJ_P0038186 Il6st protein_coding protein_coding MGP_129S1SvImJ_T0037183.1 MGP_129S1SvImJ_G0020594.1 mouse_genomes_project 13 54879273 54894295 + MGP_129S1SvImJ_P0037183 Slc34a1 protein_coding protein_coding MGP_129S1SvImJ_T0037008.1 MGP_129S1SvImJ_G0020551.1 mouse_genomes_project 13 50866259 50873720 + MGP_129S1SvImJ_P0037008 Cks2 protein_coding protein_coding MGP_129S1SvImJ_T0012902.1 MGP_129S1SvImJ_G0010991.1 mouse_genomes_project 13 21757415 21757827 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012876.1 MGP_129S1SvImJ_G0010965.1 mouse_genomes_project 13 1095348 1095831 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101853.1 MGP_129S1SvImJ_G0039796.1 mouse_genomes_project 13 21052612 21052932 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0002511.1 MGP_129S1SvImJ_G0002420.1 mouse_genomes_project 13 16504889 16513095 + MGP_129S1SvImJ_P0002511 Tcrg-C4 TR_C_gene TR_C_gene MGP_129S1SvImJ_T0012912.1 MGP_129S1SvImJ_G0011001.1 mouse_genomes_project 13 24484017 24484323 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009956.1 MGP_129S1SvImJ_G0008072.1 mouse_genomes_project 13 57648456 57648532 - Mir874 miRNA miRNA MGP_129S1SvImJ_T0102230.1 MGP_129S1SvImJ_G0040064.1 mouse_genomes_project 13 41425046 41425935 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0012970.1 MGP_129S1SvImJ_G0011059.1 mouse_genomes_project 13 102963766 102964734 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0037511.1 MGP_129S1SvImJ_G0020723.1 mouse_genomes_project 13 67935419 67947802 - MGP_129S1SvImJ_P0037511 Gm9894 protein_coding protein_coding MGP_129S1SvImJ_T0012972.1 MGP_129S1SvImJ_G0011061.1 mouse_genomes_project 13 107046035 107046443 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036486.1 MGP_129S1SvImJ_G0020322.1 mouse_genomes_project 13 19831774 19832683 - MGP_129S1SvImJ_P0036486 Vmn1r202 protein_coding protein_coding MGP_129S1SvImJ_T0017387.1 MGP_129S1SvImJ_G0015254.1 mouse_genomes_project 13 32781096 32794932 + Gm15908 processed_transcript processed_transcript MGP_129S1SvImJ_T0000925.1 MGP_129S1SvImJ_G0000857.1 mouse_genomes_project 13 104142976 104144910 - TEC TEC MGP_129S1SvImJ_T0003501.1 MGP_129S1SvImJ_G0003201.1 mouse_genomes_project 13 78769169 78807583 + antisense antisense MGP_129S1SvImJ_T0003502.1 MGP_129S1SvImJ_G0003201.1 mouse_genomes_project 13 78770930 78803751 + antisense antisense MGP_129S1SvImJ_T0003503.1 MGP_129S1SvImJ_G0003201.1 mouse_genomes_project 13 78773815 78806565 + antisense antisense MGP_129S1SvImJ_T0003504.1 MGP_129S1SvImJ_G0003201.1 mouse_genomes_project 13 78774205 78808414 + antisense antisense MGP_129S1SvImJ_T0003505.1 MGP_129S1SvImJ_G0003201.1 mouse_genomes_project 13 78775388 78803159 + antisense antisense MGP_129S1SvImJ_T0003506.1 MGP_129S1SvImJ_G0003201.1 mouse_genomes_project 13 78775622 78848868 + antisense antisense MGP_129S1SvImJ_T0037926.1 MGP_129S1SvImJ_G0020859.1 mouse_genomes_project 13 98776628 98799112 - MGP_129S1SvImJ_P0037926 Hexb protein_coding protein_coding MGP_129S1SvImJ_T0036678.1 MGP_129S1SvImJ_G0020423.1 mouse_genomes_project 13 29750707 29754660 + MGP_129S1SvImJ_P0036678 Foxc1 protein_coding protein_coding MGP_129S1SvImJ_T0012906.1 MGP_129S1SvImJ_G0010995.1 mouse_genomes_project 13 22983918 22984626 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0037613.1 MGP_129S1SvImJ_G0020770.1 mouse_genomes_project 13 75633728 75678712 + MGP_129S1SvImJ_P0037613 Pcsk1 protein_coding protein_coding MGP_129S1SvImJ_T0037614.1 MGP_129S1SvImJ_G0020770.1 mouse_genomes_project 13 75633818 75650508 + Pcsk1 protein_coding retained_intron MGP_129S1SvImJ_T0098703.1 MGP_129S1SvImJ_G0036788.1 mouse_genomes_project 13 31699763 31699975 + Gm25043 ribozyme ribozyme MGP_129S1SvImJ_T0009972.1 MGP_129S1SvImJ_G0008088.1 mouse_genomes_project 13 91973637 91973747 + Gm44338 miRNA miRNA MGP_129S1SvImJ_T0006606.1 MGP_129S1SvImJ_G0005478.1 mouse_genomes_project 13 70097063 70103245 - Gm26819 lincRNA lincRNA MGP_129S1SvImJ_T0006546.1 MGP_129S1SvImJ_G0005438.1 mouse_genomes_project 13 29246078 29248270 - Gm11374 lincRNA lincRNA MGP_129S1SvImJ_T0036305.1 MGP_129S1SvImJ_G0020229.1 mouse_genomes_project 13 9011948 9087865 - MGP_129S1SvImJ_P0036305 Actn2 protein_coding protein_coding MGP_129S1SvImJ_T0036306.1 MGP_129S1SvImJ_G0020229.1 mouse_genomes_project 13 9011957 9087829 - MGP_129S1SvImJ_P0036306 Actn2 protein_coding protein_coding MGP_129S1SvImJ_T0036307.1 MGP_129S1SvImJ_G0020229.1 mouse_genomes_project 13 9052810 9087837 - MGP_129S1SvImJ_P0036307 Actn2 protein_coding protein_coding MGP_129S1SvImJ_T0036899.1 MGP_129S1SvImJ_G0020514.1 mouse_genomes_project 13 45442339 45452997 + MGP_129S1SvImJ_P0036899 Fam8a1 protein_coding protein_coding MGP_129S1SvImJ_T0036900.1 MGP_129S1SvImJ_G0020514.1 mouse_genomes_project 13 45445900 45448524 + Fam8a1 protein_coding retained_intron MGP_129S1SvImJ_T0000904.1 MGP_129S1SvImJ_G0000836.1 mouse_genomes_project 13 40364182 40364645 + TEC TEC MGP_129S1SvImJ_T0003532.1 MGP_129S1SvImJ_G0003217.1 mouse_genomes_project 13 120638086 120650949 - 4933413L06Rik antisense antisense MGP_129S1SvImJ_T0003533.1 MGP_129S1SvImJ_G0003217.1 mouse_genomes_project 13 120638349 120650925 - 4933413L06Rik antisense antisense MGP_129S1SvImJ_T0037059.1 MGP_129S1SvImJ_G0020564.1 mouse_genomes_project 13 53426208 53430675 - MGP_129S1SvImJ_P0037059 Drd1 protein_coding protein_coding MGP_129S1SvImJ_T0100636.1 MGP_129S1SvImJ_G0038703.1 mouse_genomes_project 13 48691250 48691372 + Gm23482 snoRNA snoRNA MGP_129S1SvImJ_T0037227.1 MGP_129S1SvImJ_G0020609.1 mouse_genomes_project 13 55217340 55228912 + MGP_129S1SvImJ_P0037227 Txndc15 protein_coding protein_coding MGP_129S1SvImJ_T0037911.1 MGP_129S1SvImJ_G0020856.1 mouse_genomes_project 13 98645077 98726361 + MGP_129S1SvImJ_P0037911 Fam169a protein_coding protein_coding MGP_129S1SvImJ_T0037912.1 MGP_129S1SvImJ_G0020856.1 mouse_genomes_project 13 98655503 98726361 + MGP_129S1SvImJ_P0037912 Fam169a protein_coding protein_coding MGP_129S1SvImJ_T0003462.1 MGP_129S1SvImJ_G0003176.1 mouse_genomes_project 13 21407480 21416847 + Gm11339 antisense antisense MGP_129S1SvImJ_T0006531.1 MGP_129S1SvImJ_G0005427.1 mouse_genomes_project 13 22115855 22122505 - C530050E15Rik lincRNA lincRNA MGP_129S1SvImJ_T0000928.1 MGP_129S1SvImJ_G0000860.1 mouse_genomes_project 13 119198341 119201250 + TEC TEC MGP_129S1SvImJ_T0037003.1 MGP_129S1SvImJ_G0020546.1 mouse_genomes_project 13 49601252 49609301 + MGP_129S1SvImJ_P0037003 Nutm2 protein_coding protein_coding MGP_129S1SvImJ_T0038188.1 MGP_129S1SvImJ_G0020938.1 mouse_genomes_project 13 115161414 115215891 - MGP_129S1SvImJ_P0038188 Ddx4 protein_coding protein_coding MGP_129S1SvImJ_T0038189.1 MGP_129S1SvImJ_G0020938.1 mouse_genomes_project 13 115161414 115215891 - MGP_129S1SvImJ_P0038189 Ddx4 protein_coding protein_coding MGP_129S1SvImJ_T0037243.1 MGP_129S1SvImJ_G0020615.1 mouse_genomes_project 13 55787525 55790186 - MGP_129S1SvImJ_P0037243 Neurog1 protein_coding protein_coding MGP_129S1SvImJ_T0038257.1 MGP_129S1SvImJ_G0020971.1 mouse_genomes_project 13 122483560 122510094 + MGP_129S1SvImJ_P0038257 4833420G17Rik protein_coding protein_coding MGP_129S1SvImJ_T0036496.1 MGP_129S1SvImJ_G0020332.1 mouse_genomes_project 13 20459678 20460581 + MGP_129S1SvImJ_P0036496 Vmn1r215 protein_coding protein_coding MGP_129S1SvImJ_T0009946.1 MGP_129S1SvImJ_G0008062.1 mouse_genomes_project 13 47430065 47430168 - Mirlet7d miRNA miRNA MGP_129S1SvImJ_T0036511.1 MGP_129S1SvImJ_G0020343.1 mouse_genomes_project 13 20883982 20896280 - MGP_129S1SvImJ_P0036511 Btn2a2 protein_coding protein_coding MGP_129S1SvImJ_T0036512.1 MGP_129S1SvImJ_G0020343.1 mouse_genomes_project 13 20883982 20896297 - MGP_129S1SvImJ_P0036512 Btn2a2 protein_coding protein_coding MGP_129S1SvImJ_T0036513.1 MGP_129S1SvImJ_G0020343.1 mouse_genomes_project 13 20884194 20896287 - MGP_129S1SvImJ_P0036513 Btn2a2 protein_coding protein_coding MGP_129S1SvImJ_T0038204.1 MGP_129S1SvImJ_G0020948.1 mouse_genomes_project 13 115708747 115715902 - MGP_129S1SvImJ_P0038204 Gzma protein_coding protein_coding MGP_129S1SvImJ_T0098825.1 MGP_129S1SvImJ_G0036906.1 mouse_genomes_project 13 41564871 41573100 + Gm15809 sense_intronic sense_intronic MGP_129S1SvImJ_T0036977.1 MGP_129S1SvImJ_G0020540.1 mouse_genomes_project 13 48587033 48603463 + MGP_129S1SvImJ_P0036977 Ogn protein_coding protein_coding MGP_129S1SvImJ_T0000905.1 MGP_129S1SvImJ_G0000837.1 mouse_genomes_project 13 47436697 47439087 - TEC TEC MGP_129S1SvImJ_T0036473.1 MGP_129S1SvImJ_G0020309.1 mouse_genomes_project 13 19434715 19436293 - MGP_129S1SvImJ_P0036473 Vmn1r203 protein_coding protein_coding MGP_129S1SvImJ_T0009947.1 MGP_129S1SvImJ_G0008063.1 mouse_genomes_project 13 47431878 47431975 + Gm24111 miRNA miRNA MGP_129S1SvImJ_T0102212.1 MGP_129S1SvImJ_G0040046.1 mouse_genomes_project 13 21168169 21169725 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0006650.1 MGP_129S1SvImJ_G0005510.1 mouse_genomes_project 13 114366643 114368153 + Gm15324 lincRNA lincRNA MGP_129S1SvImJ_T0036498.1 MGP_129S1SvImJ_G0020334.1 mouse_genomes_project 13 20500075 20500972 - MGP_129S1SvImJ_P0036498 Vmn1r217 protein_coding protein_coding MGP_129S1SvImJ_T0037415.1 MGP_129S1SvImJ_G0020672.1 mouse_genomes_project 13 64065035 64097918 - MGP_129S1SvImJ_P0037415 Hsd17b3 protein_coding protein_coding MGP_129S1SvImJ_T0037416.1 MGP_129S1SvImJ_G0020672.1 mouse_genomes_project 13 64065035 64097933 - MGP_129S1SvImJ_P0037416 Hsd17b3 protein_coding protein_coding MGP_129S1SvImJ_T0036644.1 MGP_129S1SvImJ_G0020408.1 mouse_genomes_project 13 25865788 25877203 + MGP_129S1SvImJ_P0036644 Prl5a1 protein_coding protein_coding MGP_129S1SvImJ_T0038263.1 MGP_129S1SvImJ_G0020975.1 mouse_genomes_project 13 122573280 122606629 + MGP_129S1SvImJ_P0038263 Ccl28 protein_coding protein_coding MGP_129S1SvImJ_T0037397.1 MGP_129S1SvImJ_G0020670.1 mouse_genomes_project 13 63473091 63530976 - MGP_129S1SvImJ_P0037397 Ptch1 protein_coding protein_coding MGP_129S1SvImJ_T0037398.1 MGP_129S1SvImJ_G0020670.1 mouse_genomes_project 13 63473092 63538931 - MGP_129S1SvImJ_P0037398 Ptch1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037399.1 MGP_129S1SvImJ_G0020670.1 mouse_genomes_project 13 63478501 63479232 - Ptch1 protein_coding retained_intron MGP_129S1SvImJ_T0037400.1 MGP_129S1SvImJ_G0020670.1 mouse_genomes_project 13 63482867 63529271 - MGP_129S1SvImJ_P0037400 Ptch1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037401.1 MGP_129S1SvImJ_G0020670.1 mouse_genomes_project 13 63508654 63530730 - MGP_129S1SvImJ_P0037401 Ptch1 protein_coding protein_coding MGP_129S1SvImJ_T0037402.1 MGP_129S1SvImJ_G0020670.1 mouse_genomes_project 13 63508654 63529782 - MGP_129S1SvImJ_P0037402 Ptch1 protein_coding protein_coding MGP_129S1SvImJ_T0037403.1 MGP_129S1SvImJ_G0020670.1 mouse_genomes_project 13 63508654 63539069 - MGP_129S1SvImJ_P0037403 Ptch1 protein_coding protein_coding MGP_129S1SvImJ_T0003460.1 MGP_129S1SvImJ_G0003174.1 mouse_genomes_project 13 20044061 20044871 + antisense antisense MGP_129S1SvImJ_T0036245.1 MGP_129S1SvImJ_G0020218.1 mouse_genomes_project 13 5427812 5496340 - MGP_129S1SvImJ_P0036245 Wdr37 protein_coding protein_coding MGP_129S1SvImJ_T0036246.1 MGP_129S1SvImJ_G0020218.1 mouse_genomes_project 13 5427839 5495654 - MGP_129S1SvImJ_P0036246 Wdr37 protein_coding protein_coding MGP_129S1SvImJ_T0036247.1 MGP_129S1SvImJ_G0020218.1 mouse_genomes_project 13 5430575 5472417 - MGP_129S1SvImJ_P0036247 Wdr37 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036248.1 MGP_129S1SvImJ_G0020218.1 mouse_genomes_project 13 5444711 5474338 - MGP_129S1SvImJ_P0036248 Wdr37 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036249.1 MGP_129S1SvImJ_G0020218.1 mouse_genomes_project 13 5444769 5478487 - MGP_129S1SvImJ_P0036249 Wdr37 protein_coding protein_coding MGP_129S1SvImJ_T0036250.1 MGP_129S1SvImJ_G0020218.1 mouse_genomes_project 13 5460229 5462075 - Wdr37 protein_coding retained_intron MGP_129S1SvImJ_T0036251.1 MGP_129S1SvImJ_G0020218.1 mouse_genomes_project 13 5467604 5483605 - MGP_129S1SvImJ_P0036251 Wdr37 protein_coding protein_coding MGP_129S1SvImJ_T0036252.1 MGP_129S1SvImJ_G0020218.1 mouse_genomes_project 13 5472459 5496346 - MGP_129S1SvImJ_P0036252 Wdr37 protein_coding protein_coding MGP_129S1SvImJ_T0036253.1 MGP_129S1SvImJ_G0020218.1 mouse_genomes_project 13 5474322 5486068 - MGP_129S1SvImJ_P0036253 Wdr37 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036254.1 MGP_129S1SvImJ_G0020218.1 mouse_genomes_project 13 5475259 5495633 - MGP_129S1SvImJ_P0036254 Wdr37 protein_coding protein_coding MGP_129S1SvImJ_T0036255.1 MGP_129S1SvImJ_G0020218.1 mouse_genomes_project 13 5477448 5495589 - MGP_129S1SvImJ_P0036255 Wdr37 protein_coding protein_coding MGP_129S1SvImJ_T0036256.1 MGP_129S1SvImJ_G0020218.1 mouse_genomes_project 13 5477451 5486065 - MGP_129S1SvImJ_P0036256 Wdr37 protein_coding protein_coding MGP_129S1SvImJ_T0036257.1 MGP_129S1SvImJ_G0020218.1 mouse_genomes_project 13 5478104 5495604 - Wdr37 protein_coding processed_transcript MGP_129S1SvImJ_T0036258.1 MGP_129S1SvImJ_G0020218.1 mouse_genomes_project 13 5478452 5483618 - Wdr37 protein_coding processed_transcript MGP_129S1SvImJ_T0036259.1 MGP_129S1SvImJ_G0020218.1 mouse_genomes_project 13 5481698 5496519 - MGP_129S1SvImJ_P0036259 Wdr37 protein_coding protein_coding MGP_129S1SvImJ_T0036260.1 MGP_129S1SvImJ_G0020218.1 mouse_genomes_project 13 5485978 5495617 - MGP_129S1SvImJ_P0036260 Wdr37 protein_coding protein_coding MGP_129S1SvImJ_T0038191.1 MGP_129S1SvImJ_G0020940.1 mouse_genomes_project 13 115377446 115455601 + MGP_129S1SvImJ_P0038191 Plpp1 protein_coding protein_coding MGP_129S1SvImJ_T0038192.1 MGP_129S1SvImJ_G0020940.1 mouse_genomes_project 13 115377475 115455367 + MGP_129S1SvImJ_P0038192 Plpp1 protein_coding protein_coding MGP_129S1SvImJ_T0006642.1 MGP_129S1SvImJ_G0005503.1 mouse_genomes_project 13 102791052 102928732 + Gm29502 lincRNA lincRNA MGP_129S1SvImJ_T0038096.1 MGP_129S1SvImJ_G0020916.1 mouse_genomes_project 13 108969983 109129658 - MGP_129S1SvImJ_P0038096 Ipo11 protein_coding protein_coding MGP_129S1SvImJ_T0038097.1 MGP_129S1SvImJ_G0020916.1 mouse_genomes_project 13 108969983 109117596 - MGP_129S1SvImJ_P0038097 Ipo11 protein_coding protein_coding MGP_129S1SvImJ_T0038098.1 MGP_129S1SvImJ_G0020916.1 mouse_genomes_project 13 108969991 109031893 - MGP_129S1SvImJ_P0038098 Ipo11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038099.1 MGP_129S1SvImJ_G0020916.1 mouse_genomes_project 13 108988632 109043633 - Ipo11 protein_coding retained_intron MGP_129S1SvImJ_T0038100.1 MGP_129S1SvImJ_G0020916.1 mouse_genomes_project 13 108988737 109019101 - Ipo11 protein_coding retained_intron MGP_129S1SvImJ_T0038101.1 MGP_129S1SvImJ_G0020916.1 mouse_genomes_project 13 109016493 109031728 - Ipo11 protein_coding processed_transcript MGP_129S1SvImJ_T0038102.1 MGP_129S1SvImJ_G0020916.1 mouse_genomes_project 13 109016495 109019089 - Ipo11 protein_coding processed_transcript MGP_129S1SvImJ_T0038103.1 MGP_129S1SvImJ_G0020916.1 mouse_genomes_project 13 109026549 109032929 - Ipo11 protein_coding retained_intron MGP_129S1SvImJ_T0038104.1 MGP_129S1SvImJ_G0020916.1 mouse_genomes_project 13 109046260 109129645 - Ipo11 protein_coding retained_intron MGP_129S1SvImJ_T0037281.1 MGP_129S1SvImJ_G0020631.1 mouse_genomes_project 13 57920342 57993807 - MGP_129S1SvImJ_P0037281 Kif27 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0017373.1 MGP_129S1SvImJ_G0015246.1 mouse_genomes_project 13 18704725 18710252 + 4930470G03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0099348.1 MGP_129S1SvImJ_G0037415.1 mouse_genomes_project 13 14257636 14257743 + Gm25020 snRNA snRNA MGP_129S1SvImJ_T0037158.1 MGP_129S1SvImJ_G0020585.1 mouse_genomes_project 13 54556081 54587025 + MGP_129S1SvImJ_P0037158 Zfp346 protein_coding protein_coding MGP_129S1SvImJ_T0037159.1 MGP_129S1SvImJ_G0020585.1 mouse_genomes_project 13 54556084 54574453 + MGP_129S1SvImJ_P0037159 Zfp346 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037160.1 MGP_129S1SvImJ_G0020585.1 mouse_genomes_project 13 54556087 54584359 + MGP_129S1SvImJ_P0037160 Zfp346 protein_coding protein_coding MGP_129S1SvImJ_T0037161.1 MGP_129S1SvImJ_G0020585.1 mouse_genomes_project 13 54556106 54582577 + MGP_129S1SvImJ_P0037161 Zfp346 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037162.1 MGP_129S1SvImJ_G0020585.1 mouse_genomes_project 13 54556106 54584727 + MGP_129S1SvImJ_P0037162 Zfp346 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037163.1 MGP_129S1SvImJ_G0020585.1 mouse_genomes_project 13 54556110 54584468 + MGP_129S1SvImJ_P0037163 Zfp346 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037164.1 MGP_129S1SvImJ_G0020585.1 mouse_genomes_project 13 54556112 54584560 + MGP_129S1SvImJ_P0037164 Zfp346 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037165.1 MGP_129S1SvImJ_G0020585.1 mouse_genomes_project 13 54556172 54584347 + MGP_129S1SvImJ_P0037165 Zfp346 protein_coding protein_coding MGP_129S1SvImJ_T0037166.1 MGP_129S1SvImJ_G0020585.1 mouse_genomes_project 13 54564577 54565460 + Zfp346 protein_coding retained_intron MGP_129S1SvImJ_T0037167.1 MGP_129S1SvImJ_G0020585.1 mouse_genomes_project 13 54573990 54584328 + Zfp346 protein_coding retained_intron MGP_129S1SvImJ_T0037168.1 MGP_129S1SvImJ_G0020585.1 mouse_genomes_project 13 54582200 54584602 + Zfp346 protein_coding retained_intron MGP_129S1SvImJ_T0036452.1 MGP_129S1SvImJ_G0020299.1 mouse_genomes_project 13 19067195 19116348 + MGP_129S1SvImJ_P0036452 Hist1h2bq protein_coding protein_coding MGP_129S1SvImJ_T0036453.1 MGP_129S1SvImJ_G0020299.1 mouse_genomes_project 13 19067195 19116548 + MGP_129S1SvImJ_P0036453 Hist1h2bq protein_coding protein_coding MGP_129S1SvImJ_T0003485.1 MGP_129S1SvImJ_G0003192.1 mouse_genomes_project 13 63293243 63300866 + Gm16133 antisense antisense MGP_129S1SvImJ_T0003486.1 MGP_129S1SvImJ_G0003192.1 mouse_genomes_project 13 63293316 63300863 + Gm16133 antisense antisense MGP_129S1SvImJ_T0038238.1 MGP_129S1SvImJ_G0020965.1 mouse_genomes_project 13 120534966 120939839 + MGP_129S1SvImJ_P0038238 Hcn1 protein_coding protein_coding MGP_129S1SvImJ_T0037507.1 MGP_129S1SvImJ_G0020720.1 mouse_genomes_project 13 67872663 67888327 - MGP_129S1SvImJ_P0037507 protein_coding protein_coding MGP_129S1SvImJ_T0037508.1 MGP_129S1SvImJ_G0020720.1 mouse_genomes_project 13 67872997 67888359 - protein_coding processed_transcript MGP_129S1SvImJ_T0037341.1 MGP_129S1SvImJ_G0020640.1 mouse_genomes_project 13 59396304 59403038 - MGP_129S1SvImJ_P0037341 4921517D22Rik protein_coding protein_coding MGP_129S1SvImJ_T0037774.1 MGP_129S1SvImJ_G0020808.1 mouse_genomes_project 13 93028662 93079920 + MGP_129S1SvImJ_P0037774 Acot12 protein_coding protein_coding MGP_129S1SvImJ_T0037775.1 MGP_129S1SvImJ_G0020808.1 mouse_genomes_project 13 93028683 93054539 + Acot12 protein_coding retained_intron MGP_129S1SvImJ_T0037776.1 MGP_129S1SvImJ_G0020808.1 mouse_genomes_project 13 93073109 93078676 + Acot12 protein_coding processed_transcript MGP_129S1SvImJ_T0036738.1 MGP_129S1SvImJ_G0020448.1 mouse_genomes_project 13 32238387 32240373 - MGP_129S1SvImJ_P0036738 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0037081.1 MGP_129S1SvImJ_G0020571.1 mouse_genomes_project 13 53979390 53985504 + MGP_129S1SvImJ_P0037081 Arl10 protein_coding protein_coding MGP_129S1SvImJ_T0037082.1 MGP_129S1SvImJ_G0020571.1 mouse_genomes_project 13 53979422 53983392 + MGP_129S1SvImJ_P0037082 Arl10 protein_coding protein_coding MGP_129S1SvImJ_T0037083.1 MGP_129S1SvImJ_G0020571.1 mouse_genomes_project 13 53982756 53983285 + Arl10 protein_coding processed_transcript MGP_129S1SvImJ_T0037084.1 MGP_129S1SvImJ_G0020571.1 mouse_genomes_project 13 53983187 53983913 + MGP_129S1SvImJ_P0037084 Arl10 protein_coding protein_coding MGP_129S1SvImJ_T0038114.1 MGP_129S1SvImJ_G0020919.1 mouse_genomes_project 13 109233260 109234969 + MGP_129S1SvImJ_P0038114 3830408C21Rik protein_coding protein_coding MGP_129S1SvImJ_T0037355.1 MGP_129S1SvImJ_G0020650.1 mouse_genomes_project 13 60581469 60586064 - MGP_129S1SvImJ_P0037355 Ctsll3 protein_coding protein_coding MGP_129S1SvImJ_T0011366.1 MGP_129S1SvImJ_G0009482.1 mouse_genomes_project 13 10339830 10340094 + Gm24065 misc_RNA misc_RNA MGP_129S1SvImJ_T0006641.1 MGP_129S1SvImJ_G0005502.1 mouse_genomes_project 13 101307101 101315294 + Gm26559 lincRNA lincRNA MGP_129S1SvImJ_T0037473.1 MGP_129S1SvImJ_G0020701.1 mouse_genomes_project 13 67310629 67319577 + MGP_129S1SvImJ_P0037473 protein_coding protein_coding MGP_129S1SvImJ_T0037474.1 MGP_129S1SvImJ_G0020701.1 mouse_genomes_project 13 67310646 67319595 + MGP_129S1SvImJ_P0037474 protein_coding protein_coding MGP_129S1SvImJ_T0038020.1 MGP_129S1SvImJ_G0020895.1 mouse_genomes_project 13 102715803 102718212 - protein_coding retained_intron MGP_129S1SvImJ_T0038021.1 MGP_129S1SvImJ_G0020895.1 mouse_genomes_project 13 102715856 102722882 - MGP_129S1SvImJ_P0038021 protein_coding protein_coding MGP_129S1SvImJ_T0038022.1 MGP_129S1SvImJ_G0020895.1 mouse_genomes_project 13 102719392 102722083 - protein_coding retained_intron MGP_129S1SvImJ_T0038023.1 MGP_129S1SvImJ_G0020895.1 mouse_genomes_project 13 102722016 102722955 - protein_coding retained_intron MGP_129S1SvImJ_T0037360.1 MGP_129S1SvImJ_G0020654.1 mouse_genomes_project 13 60715160 60717631 - MGP_129S1SvImJ_P0037360 Ctla2a protein_coding protein_coding MGP_129S1SvImJ_T0036763.1 MGP_129S1SvImJ_G0020459.1 mouse_genomes_project 13 34082106 34094978 - MGP_129S1SvImJ_P0036763 Rpp40 protein_coding protein_coding MGP_129S1SvImJ_T0036764.1 MGP_129S1SvImJ_G0020459.1 mouse_genomes_project 13 34085324 34087489 - MGP_129S1SvImJ_P0036764 Rpp40 protein_coding protein_coding MGP_129S1SvImJ_T0036765.1 MGP_129S1SvImJ_G0020459.1 mouse_genomes_project 13 34085332 34094947 - Rpp40 protein_coding retained_intron MGP_129S1SvImJ_T0036766.1 MGP_129S1SvImJ_G0020459.1 mouse_genomes_project 13 34085335 34094963 - MGP_129S1SvImJ_P0036766 Rpp40 protein_coding protein_coding MGP_129S1SvImJ_T0037232.1 MGP_129S1SvImJ_G0020612.1 mouse_genomes_project 13 55334175 55340406 - MGP_129S1SvImJ_P0037232 Pitx1 protein_coding protein_coding MGP_129S1SvImJ_T0037233.1 MGP_129S1SvImJ_G0020612.1 mouse_genomes_project 13 55337597 55345176 - MGP_129S1SvImJ_P0037233 Pitx1 protein_coding protein_coding MGP_129S1SvImJ_T0099378.1 MGP_129S1SvImJ_G0037445.1 mouse_genomes_project 13 108952835 108952942 - Gm24527 snRNA snRNA MGP_129S1SvImJ_T0036488.1 MGP_129S1SvImJ_G0020324.1 mouse_genomes_project 13 19922359 19923497 - MGP_129S1SvImJ_P0036488 Vmn1r205 protein_coding protein_coding MGP_129S1SvImJ_T0036586.1 MGP_129S1SvImJ_G0020379.1 mouse_genomes_project 13 22242461 22252502 - MGP_129S1SvImJ_P0036586 Gmnn protein_coding protein_coding MGP_129S1SvImJ_T0036587.1 MGP_129S1SvImJ_G0020379.1 mouse_genomes_project 13 22242461 22252440 - MGP_129S1SvImJ_P0036587 Gmnn protein_coding protein_coding MGP_129S1SvImJ_T0036588.1 MGP_129S1SvImJ_G0020379.1 mouse_genomes_project 13 22242707 22252055 - MGP_129S1SvImJ_P0036588 Gmnn protein_coding protein_coding MGP_129S1SvImJ_T0036589.1 MGP_129S1SvImJ_G0020379.1 mouse_genomes_project 13 22242804 22252019 - MGP_129S1SvImJ_P0036589 Gmnn protein_coding protein_coding MGP_129S1SvImJ_T0036590.1 MGP_129S1SvImJ_G0020379.1 mouse_genomes_project 13 22244293 22252476 - MGP_129S1SvImJ_P0036590 Gmnn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0003514.1 MGP_129S1SvImJ_G0003205.1 mouse_genomes_project 13 93713592 93725751 - C030017D09Rik antisense antisense MGP_129S1SvImJ_T0037246.1 MGP_129S1SvImJ_G0020618.1 mouse_genomes_project 13 55990110 56025800 + MGP_129S1SvImJ_P0037246 Slc25a48 protein_coding protein_coding MGP_129S1SvImJ_T0006593.1 MGP_129S1SvImJ_G0005468.1 mouse_genomes_project 13 54339544 54340788 + 5330429C05Rik lincRNA lincRNA MGP_129S1SvImJ_T0036696.1 MGP_129S1SvImJ_G0020431.1 mouse_genomes_project 13 31009854 31024553 + MGP_129S1SvImJ_P0036696 Serpinb9 protein_coding protein_coding MGP_129S1SvImJ_T0036697.1 MGP_129S1SvImJ_G0020431.1 mouse_genomes_project 13 31011138 31024551 + MGP_129S1SvImJ_P0036697 Serpinb9 protein_coding protein_coding MGP_129S1SvImJ_T0006643.1 MGP_129S1SvImJ_G0005504.1 mouse_genomes_project 13 103359552 103430679 + lincRNA lincRNA MGP_129S1SvImJ_T0012881.1 MGP_129S1SvImJ_G0010970.1 mouse_genomes_project 13 14088166 14089124 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0037580.1 MGP_129S1SvImJ_G0020756.1 mouse_genomes_project 13 74481503 74481689 - MGP_129S1SvImJ_P0037580 Gm10126 protein_coding protein_coding MGP_129S1SvImJ_T0036443.1 MGP_129S1SvImJ_G0020290.1 mouse_genomes_project 13 18972408 18973373 + MGP_129S1SvImJ_P0036443 protein_coding protein_coding MGP_129S1SvImJ_T0003453.1 MGP_129S1SvImJ_G0003168.1 mouse_genomes_project 13 16267192 16303937 - Gm43385 antisense antisense MGP_129S1SvImJ_T0037215.1 MGP_129S1SvImJ_G0020604.1 mouse_genomes_project 13 55083371 55087900 + MGP_129S1SvImJ_P0037215 Tmed9 protein_coding protein_coding MGP_129S1SvImJ_T0012894.1 MGP_129S1SvImJ_G0010983.1 mouse_genomes_project 13 19790124 19793683 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038129.1 MGP_129S1SvImJ_G0020925.1 mouse_genomes_project 13 110513031 110591814 + MGP_129S1SvImJ_P0038129 Elovl7 protein_coding protein_coding MGP_129S1SvImJ_T0037145.1 MGP_129S1SvImJ_G0020583.1 mouse_genomes_project 13 54440620 54455938 - MGP_129S1SvImJ_P0037145 Hk3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037146.1 MGP_129S1SvImJ_G0020583.1 mouse_genomes_project 13 54440696 54455546 - MGP_129S1SvImJ_P0037146 Hk3 protein_coding protein_coding MGP_129S1SvImJ_T0037147.1 MGP_129S1SvImJ_G0020583.1 mouse_genomes_project 13 54440799 54455891 - MGP_129S1SvImJ_P0037147 Hk3 protein_coding protein_coding MGP_129S1SvImJ_T0037148.1 MGP_129S1SvImJ_G0020583.1 mouse_genomes_project 13 54449669 54455939 - MGP_129S1SvImJ_P0037148 Hk3 protein_coding protein_coding MGP_129S1SvImJ_T0037149.1 MGP_129S1SvImJ_G0020583.1 mouse_genomes_project 13 54449719 54455964 - MGP_129S1SvImJ_P0037149 Hk3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037150.1 MGP_129S1SvImJ_G0020583.1 mouse_genomes_project 13 54450407 54455859 - MGP_129S1SvImJ_P0037150 Hk3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0099363.1 MGP_129S1SvImJ_G0037430.1 mouse_genomes_project 13 42490016 42490124 + Gm23117 snRNA snRNA MGP_129S1SvImJ_T0037140.1 MGP_129S1SvImJ_G0020582.1 mouse_genomes_project 13 54378779 54440647 + MGP_129S1SvImJ_P0037140 Unc5a protein_coding protein_coding MGP_129S1SvImJ_T0037141.1 MGP_129S1SvImJ_G0020582.1 mouse_genomes_project 13 54378779 54440647 + MGP_129S1SvImJ_P0037141 Unc5a protein_coding protein_coding MGP_129S1SvImJ_T0037142.1 MGP_129S1SvImJ_G0020582.1 mouse_genomes_project 13 54431170 54434414 + MGP_129S1SvImJ_P0037142 Unc5a protein_coding protein_coding MGP_129S1SvImJ_T0037143.1 MGP_129S1SvImJ_G0020582.1 mouse_genomes_project 13 54437638 54439282 + Unc5a protein_coding retained_intron MGP_129S1SvImJ_T0037144.1 MGP_129S1SvImJ_G0020582.1 mouse_genomes_project 13 54438308 54440115 + MGP_129S1SvImJ_P0037144 Unc5a protein_coding protein_coding MGP_129S1SvImJ_T0038156.1 MGP_129S1SvImJ_G0020928.1 mouse_genomes_project 13 112440017 112679106 - MGP_129S1SvImJ_P0038156 Rab3c protein_coding protein_coding MGP_129S1SvImJ_T0037607.1 MGP_129S1SvImJ_G0020765.1 mouse_genomes_project 13 74860902 74865331 - MGP_129S1SvImJ_P0037607 Lrrc14b protein_coding protein_coding MGP_129S1SvImJ_T0099364.1 MGP_129S1SvImJ_G0037431.1 mouse_genomes_project 13 43706458 43706562 - Gm23104 snRNA snRNA MGP_129S1SvImJ_T0037490.1 MGP_129S1SvImJ_G0020710.1 mouse_genomes_project 13 67548741 67564906 - MGP_129S1SvImJ_P0037490 Zfp459 protein_coding protein_coding MGP_129S1SvImJ_T0038119.1 MGP_129S1SvImJ_G0020924.1 mouse_genomes_project 13 110453787 110494085 + MGP_129S1SvImJ_P0038119 Ercc8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038120.1 MGP_129S1SvImJ_G0020924.1 mouse_genomes_project 13 110453794 110459560 + Ercc8 protein_coding retained_intron MGP_129S1SvImJ_T0038121.1 MGP_129S1SvImJ_G0020924.1 mouse_genomes_project 13 110453794 110493702 + MGP_129S1SvImJ_P0038121 Ercc8 protein_coding protein_coding MGP_129S1SvImJ_T0038122.1 MGP_129S1SvImJ_G0020924.1 mouse_genomes_project 13 110453794 110471850 + MGP_129S1SvImJ_P0038122 Ercc8 protein_coding protein_coding MGP_129S1SvImJ_T0038123.1 MGP_129S1SvImJ_G0020924.1 mouse_genomes_project 13 110453794 110474521 + MGP_129S1SvImJ_P0038123 Ercc8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038124.1 MGP_129S1SvImJ_G0020924.1 mouse_genomes_project 13 110453810 110493702 + MGP_129S1SvImJ_P0038124 Ercc8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038125.1 MGP_129S1SvImJ_G0020924.1 mouse_genomes_project 13 110453827 110493694 + MGP_129S1SvImJ_P0038125 Ercc8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038126.1 MGP_129S1SvImJ_G0020924.1 mouse_genomes_project 13 110453831 110470355 + MGP_129S1SvImJ_P0038126 Ercc8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038127.1 MGP_129S1SvImJ_G0020924.1 mouse_genomes_project 13 110453859 110481158 + MGP_129S1SvImJ_P0038127 Ercc8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038128.1 MGP_129S1SvImJ_G0020924.1 mouse_genomes_project 13 110453860 110475937 + MGP_129S1SvImJ_P0038128 Ercc8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036820.1 MGP_129S1SvImJ_G0020483.1 mouse_genomes_project 13 39507283 39559761 - MGP_129S1SvImJ_P0036820 Mak protein_coding protein_coding MGP_129S1SvImJ_T0036821.1 MGP_129S1SvImJ_G0020483.1 mouse_genomes_project 13 39507283 39550519 - MGP_129S1SvImJ_P0036821 Mak protein_coding protein_coding MGP_129S1SvImJ_T0036822.1 MGP_129S1SvImJ_G0020483.1 mouse_genomes_project 13 39507283 39559761 - MGP_129S1SvImJ_P0036822 Mak protein_coding protein_coding MGP_129S1SvImJ_T0037505.1 MGP_129S1SvImJ_G0020718.1 mouse_genomes_project 13 67781991 67810996 - MGP_129S1SvImJ_P0037505 Zfp729a protein_coding protein_coding MGP_129S1SvImJ_T0036831.1 MGP_129S1SvImJ_G0020489.1 mouse_genomes_project 13 39799133 39850169 - MGP_129S1SvImJ_P0036831 Nedd9 protein_coding protein_coding MGP_129S1SvImJ_T0036832.1 MGP_129S1SvImJ_G0020489.1 mouse_genomes_project 13 39799133 39983505 - MGP_129S1SvImJ_P0036832 Nedd9 protein_coding protein_coding MGP_129S1SvImJ_T0102201.1 MGP_129S1SvImJ_G0040035.1 mouse_genomes_project 13 20111150 20112256 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0009975.1 MGP_129S1SvImJ_G0008091.1 mouse_genomes_project 13 95310864 95311180 - miRNA miRNA MGP_129S1SvImJ_T0037675.1 MGP_129S1SvImJ_G0020788.1 mouse_genomes_project 13 82441107 82480180 - MGP_129S1SvImJ_P0037675 Polr3g protein_coding protein_coding MGP_129S1SvImJ_T0037676.1 MGP_129S1SvImJ_G0020788.1 mouse_genomes_project 13 82441144 82456489 - Polr3g protein_coding retained_intron MGP_129S1SvImJ_T0037677.1 MGP_129S1SvImJ_G0020788.1 mouse_genomes_project 13 82463024 82480123 - MGP_129S1SvImJ_P0037677 Polr3g protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037678.1 MGP_129S1SvImJ_G0020788.1 mouse_genomes_project 13 82463461 82480112 - MGP_129S1SvImJ_P0037678 Polr3g protein_coding protein_coding MGP_129S1SvImJ_T0037679.1 MGP_129S1SvImJ_G0020788.1 mouse_genomes_project 13 82468547 82480169 - Polr3g protein_coding retained_intron MGP_129S1SvImJ_T0003523.1 MGP_129S1SvImJ_G0003210.1 mouse_genomes_project 13 101939425 101940970 - BC001981 antisense antisense MGP_129S1SvImJ_T0003524.1 MGP_129S1SvImJ_G0003210.1 mouse_genomes_project 13 101940665 101940968 - BC001981 antisense antisense MGP_129S1SvImJ_T0017401.1 MGP_129S1SvImJ_G0015264.1 mouse_genomes_project 13 122497685 122500654 - Gm9752 processed_transcript processed_transcript MGP_129S1SvImJ_T0017378.1 MGP_129S1SvImJ_G0015251.1 mouse_genomes_project 13 21200112 21201537 - 4930558J22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0037817.1 MGP_129S1SvImJ_G0020822.1 mouse_genomes_project 13 94368452 94478591 - MGP_129S1SvImJ_P0037817 Cmya5 protein_coding protein_coding MGP_129S1SvImJ_T0036372.1 MGP_129S1SvImJ_G0020256.1 mouse_genomes_project 13 15824460 15982410 + MGP_129S1SvImJ_P0036372 Vps41 protein_coding protein_coding MGP_129S1SvImJ_T0012909.1 MGP_129S1SvImJ_G0010998.1 mouse_genomes_project 13 23221435 23222887 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038236.1 MGP_129S1SvImJ_G0020963.1 mouse_genomes_project 13 120136882 120139251 - MGP_129S1SvImJ_P0038236 Gm17509 protein_coding protein_coding MGP_129S1SvImJ_T0037909.1 MGP_129S1SvImJ_G0020854.1 mouse_genomes_project 13 98499313 98528274 + MGP_129S1SvImJ_P0037909 Gcnt4 protein_coding protein_coding MGP_129S1SvImJ_T0038244.1 MGP_129S1SvImJ_G0020969.1 mouse_genomes_project 13 122326730 122426447 - MGP_129S1SvImJ_P0038244 Nnt protein_coding protein_coding MGP_129S1SvImJ_T0038245.1 MGP_129S1SvImJ_G0020969.1 mouse_genomes_project 13 122326730 122426447 - MGP_129S1SvImJ_P0038245 Nnt protein_coding protein_coding MGP_129S1SvImJ_T0038246.1 MGP_129S1SvImJ_G0020969.1 mouse_genomes_project 13 122326804 122426482 - MGP_129S1SvImJ_P0038246 Nnt protein_coding unknown_likely_coding MGP_129S1SvImJ_T0038247.1 MGP_129S1SvImJ_G0020969.1 mouse_genomes_project 13 122345337 122426447 - MGP_129S1SvImJ_P0038247 Nnt protein_coding protein_coding MGP_129S1SvImJ_T0038248.1 MGP_129S1SvImJ_G0020969.1 mouse_genomes_project 13 122401525 122426447 - Nnt protein_coding processed_transcript MGP_129S1SvImJ_T0038249.1 MGP_129S1SvImJ_G0020969.1 mouse_genomes_project 13 122410706 122426447 - Nnt protein_coding processed_transcript MGP_129S1SvImJ_T0037380.1 MGP_129S1SvImJ_G0020669.1 mouse_genomes_project 13 63264801 63395697 - MGP_129S1SvImJ_P0037380 Fancc protein_coding protein_coding MGP_129S1SvImJ_T0037381.1 MGP_129S1SvImJ_G0020669.1 mouse_genomes_project 13 63271627 63395676 - MGP_129S1SvImJ_P0037381 Fancc protein_coding protein_coding MGP_129S1SvImJ_T0037382.1 MGP_129S1SvImJ_G0020669.1 mouse_genomes_project 13 63271842 63277505 - Fancc protein_coding processed_transcript MGP_129S1SvImJ_T0037383.1 MGP_129S1SvImJ_G0020669.1 mouse_genomes_project 13 63271843 63395677 - MGP_129S1SvImJ_P0037383 Fancc protein_coding protein_coding MGP_129S1SvImJ_T0037384.1 MGP_129S1SvImJ_G0020669.1 mouse_genomes_project 13 63272223 63395646 - MGP_129S1SvImJ_P0037384 Fancc protein_coding protein_coding MGP_129S1SvImJ_T0037385.1 MGP_129S1SvImJ_G0020669.1 mouse_genomes_project 13 63272584 63285127 - Fancc protein_coding processed_transcript MGP_129S1SvImJ_T0037386.1 MGP_129S1SvImJ_G0020669.1 mouse_genomes_project 13 63276609 63395674 - Fancc protein_coding retained_intron MGP_129S1SvImJ_T0037387.1 MGP_129S1SvImJ_G0020669.1 mouse_genomes_project 13 63281407 63291971 - Fancc protein_coding processed_transcript MGP_129S1SvImJ_T0037388.1 MGP_129S1SvImJ_G0020669.1 mouse_genomes_project 13 63290645 63312990 - Fancc protein_coding processed_transcript MGP_129S1SvImJ_T0037389.1 MGP_129S1SvImJ_G0020669.1 mouse_genomes_project 13 63290645 63395697 - Fancc protein_coding retained_intron MGP_129S1SvImJ_T0037390.1 MGP_129S1SvImJ_G0020669.1 mouse_genomes_project 13 63301295 63359458 - MGP_129S1SvImJ_P0037390 Fancc protein_coding protein_coding MGP_129S1SvImJ_T0037391.1 MGP_129S1SvImJ_G0020669.1 mouse_genomes_project 13 63308187 63395209 - MGP_129S1SvImJ_P0037391 Fancc protein_coding protein_coding MGP_129S1SvImJ_T0037392.1 MGP_129S1SvImJ_G0020669.1 mouse_genomes_project 13 63308238 63367519 - MGP_129S1SvImJ_P0037392 Fancc protein_coding protein_coding MGP_129S1SvImJ_T0037393.1 MGP_129S1SvImJ_G0020669.1 mouse_genomes_project 13 63308247 63359585 - Fancc protein_coding retained_intron MGP_129S1SvImJ_T0037394.1 MGP_129S1SvImJ_G0020669.1 mouse_genomes_project 13 63308277 63462263 - MGP_129S1SvImJ_P0037394 Fancc protein_coding protein_coding MGP_129S1SvImJ_T0037395.1 MGP_129S1SvImJ_G0020669.1 mouse_genomes_project 13 63364234 63395635 - MGP_129S1SvImJ_P0037395 Fancc protein_coding protein_coding MGP_129S1SvImJ_T0037396.1 MGP_129S1SvImJ_G0020669.1 mouse_genomes_project 13 63364291 63370984 - MGP_129S1SvImJ_P0037396 Fancc protein_coding protein_coding MGP_129S1SvImJ_T0098311.1 MGP_129S1SvImJ_G0036396.1 mouse_genomes_project 13 26601611 26601851 + pseudogene pseudogene MGP_129S1SvImJ_T0100642.1 MGP_129S1SvImJ_G0038709.1 mouse_genomes_project 13 70456288 70456416 + Gm26018 snoRNA snoRNA MGP_129S1SvImJ_T0038215.1 MGP_129S1SvImJ_G0020955.1 mouse_genomes_project 13 116977581 117087449 - MGP_129S1SvImJ_P0038215 Ndufs4 protein_coding protein_coding MGP_129S1SvImJ_T0037339.1 MGP_129S1SvImJ_G0020639.1 mouse_genomes_project 13 59343482 59384656 - MGP_129S1SvImJ_P0037339 Golm1 protein_coding protein_coding MGP_129S1SvImJ_T0037340.1 MGP_129S1SvImJ_G0020639.1 mouse_genomes_project 13 59343482 59384656 - MGP_129S1SvImJ_P0037340 Golm1 protein_coding protein_coding MGP_129S1SvImJ_T0003509.1 MGP_129S1SvImJ_G0003203.1 mouse_genomes_project 13 92995249 93029023 - 4833422C13Rik antisense antisense MGP_129S1SvImJ_T0003510.1 MGP_129S1SvImJ_G0003203.1 mouse_genomes_project 13 93001488 93028927 - 4833422C13Rik antisense antisense MGP_129S1SvImJ_T0003511.1 MGP_129S1SvImJ_G0003203.1 mouse_genomes_project 13 93006879 93028979 - 4833422C13Rik antisense antisense MGP_129S1SvImJ_T0037005.1 MGP_129S1SvImJ_G0020548.1 mouse_genomes_project 13 50349951 50354435 + MGP_129S1SvImJ_P0037005 Nxnl2 protein_coding protein_coding MGP_129S1SvImJ_T0037357.1 MGP_129S1SvImJ_G0020652.1 mouse_genomes_project 13 60672311 60674379 - MGP_129S1SvImJ_P0037357 Ctla2b protein_coding protein_coding MGP_129S1SvImJ_T0037358.1 MGP_129S1SvImJ_G0020652.1 mouse_genomes_project 13 60672311 60674379 - MGP_129S1SvImJ_P0037358 Ctla2b protein_coding protein_coding MGP_129S1SvImJ_T0100623.1 MGP_129S1SvImJ_G0038690.1 mouse_genomes_project 13 9375952 9376140 + Gm25804 snoRNA snoRNA MGP_129S1SvImJ_T0099374.1 MGP_129S1SvImJ_G0037441.1 mouse_genomes_project 13 97395349 97395508 - Gm24032 snRNA snRNA MGP_129S1SvImJ_T0036866.1 MGP_129S1SvImJ_G0020503.1 mouse_genomes_project 13 42401472 42419506 + MGP_129S1SvImJ_P0036866 Cd83 protein_coding protein_coding MGP_129S1SvImJ_T0036688.1 MGP_129S1SvImJ_G0020427.1 mouse_genomes_project 13 30805902 30806295 - MGP_129S1SvImJ_P0036688 D930007J09Rik protein_coding protein_coding MGP_129S1SvImJ_T0012896.1 MGP_129S1SvImJ_G0010985.1 mouse_genomes_project 13 20133090 20133522 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102218.1 MGP_129S1SvImJ_G0040052.1 mouse_genomes_project 13 31013140 31013298 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0038106.1 MGP_129S1SvImJ_G0020918.1 mouse_genomes_project 13 109153230 109220628 - MGP_129S1SvImJ_P0038106 Kif2a protein_coding protein_coding MGP_129S1SvImJ_T0038107.1 MGP_129S1SvImJ_G0020918.1 mouse_genomes_project 13 109155536 109220624 - MGP_129S1SvImJ_P0038107 Kif2a protein_coding protein_coding MGP_129S1SvImJ_T0038108.1 MGP_129S1SvImJ_G0020918.1 mouse_genomes_project 13 109156128 109220636 - MGP_129S1SvImJ_P0038108 Kif2a protein_coding protein_coding MGP_129S1SvImJ_T0038109.1 MGP_129S1SvImJ_G0020918.1 mouse_genomes_project 13 109156397 109193320 - MGP_129S1SvImJ_P0038109 Kif2a protein_coding protein_coding MGP_129S1SvImJ_T0038110.1 MGP_129S1SvImJ_G0020918.1 mouse_genomes_project 13 109158031 109220537 - MGP_129S1SvImJ_P0038110 Kif2a protein_coding protein_coding MGP_129S1SvImJ_T0038111.1 MGP_129S1SvImJ_G0020918.1 mouse_genomes_project 13 109165408 109173704 - MGP_129S1SvImJ_P0038111 Kif2a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038112.1 MGP_129S1SvImJ_G0020918.1 mouse_genomes_project 13 109176317 109220259 - MGP_129S1SvImJ_P0038112 Kif2a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038113.1 MGP_129S1SvImJ_G0020918.1 mouse_genomes_project 13 109183906 109190484 - MGP_129S1SvImJ_P0038113 Kif2a protein_coding protein_coding MGP_129S1SvImJ_T0012964.1 MGP_129S1SvImJ_G0011053.1 mouse_genomes_project 13 93598341 93598590 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100644.1 MGP_129S1SvImJ_G0038711.1 mouse_genomes_project 13 76310136 76310266 + Gm23127 snoRNA snoRNA MGP_129S1SvImJ_T0009980.1 MGP_129S1SvImJ_G0008096.1 mouse_genomes_project 13 111676994 111677075 + Mir582 miRNA miRNA MGP_129S1SvImJ_T0037254.1 MGP_129S1SvImJ_G0020623.1 mouse_genomes_project 13 56278864 56312534 + MGP_129S1SvImJ_P0037254 Smad5 protein_coding protein_coding MGP_129S1SvImJ_T0037255.1 MGP_129S1SvImJ_G0020623.1 mouse_genomes_project 13 56278893 56303372 + Smad5 protein_coding processed_transcript MGP_129S1SvImJ_T0037256.1 MGP_129S1SvImJ_G0020623.1 mouse_genomes_project 13 56278906 56310117 + MGP_129S1SvImJ_P0037256 Smad5 protein_coding protein_coding MGP_129S1SvImJ_T0037257.1 MGP_129S1SvImJ_G0020623.1 mouse_genomes_project 13 56278920 56303283 + Smad5 protein_coding processed_transcript MGP_129S1SvImJ_T0037258.1 MGP_129S1SvImJ_G0020623.1 mouse_genomes_project 13 56280656 56310461 + MGP_129S1SvImJ_P0037258 Smad5 protein_coding protein_coding MGP_129S1SvImJ_T0037259.1 MGP_129S1SvImJ_G0020623.1 mouse_genomes_project 13 56303174 56309155 + Smad5 protein_coding processed_transcript MGP_129S1SvImJ_T0038193.1 MGP_129S1SvImJ_G0020941.1 mouse_genomes_project 13 115455499 115520177 - MGP_129S1SvImJ_P0038193 Skiv2l2 protein_coding protein_coding MGP_129S1SvImJ_T0036751.1 MGP_129S1SvImJ_G0020453.1 mouse_genomes_project 13 33016304 33043690 + MGP_129S1SvImJ_P0036751 Prpf4b protein_coding protein_coding MGP_129S1SvImJ_T0006629.1 MGP_129S1SvImJ_G0005494.1 mouse_genomes_project 13 98891848 98894582 + C430039J16Rik lincRNA lincRNA MGP_129S1SvImJ_T0037586.1 MGP_129S1SvImJ_G0020759.1 mouse_genomes_project 13 74619065 74664715 + MGP_129S1SvImJ_P0037586 Slc9a3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0037587.1 MGP_129S1SvImJ_G0020759.1 mouse_genomes_project 13 74619065 74663616 + MGP_129S1SvImJ_P0037587 Slc9a3 protein_coding protein_coding MGP_129S1SvImJ_T0012922.1 MGP_129S1SvImJ_G0011011.1 mouse_genomes_project 13 29096176 29096748 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036224.1 MGP_129S1SvImJ_G0020213.1 mouse_genomes_project 13 2967571 2971209 + MGP_129S1SvImJ_P0036224 Gm28465 protein_coding protein_coding MGP_129S1SvImJ_T0099347.1 MGP_129S1SvImJ_G0037414.1 mouse_genomes_project 13 11615686 11615799 - Gm25444 snRNA snRNA MGP_129S1SvImJ_T0037175.1 MGP_129S1SvImJ_G0020590.1 mouse_genomes_project 13 54790728 54795439 + MGP_129S1SvImJ_P0037175 Prelid1 protein_coding protein_coding MGP_129S1SvImJ_T0009924.1 MGP_129S1SvImJ_G0008040.1 mouse_genomes_project 13 2355543 2355634 - Gm26043 miRNA miRNA MGP_129S1SvImJ_T0100622.1 MGP_129S1SvImJ_G0038689.1 mouse_genomes_project 13 9372453 9372689 + Gm25483 snoRNA snoRNA MGP_129S1SvImJ_T0006582.1 MGP_129S1SvImJ_G0005464.1 mouse_genomes_project 13 52727706 52731999 + Gm2762 lincRNA lincRNA MGP_129S1SvImJ_T0006583.1 MGP_129S1SvImJ_G0005464.1 mouse_genomes_project 13 52727722 52790164 + Gm2762 lincRNA lincRNA MGP_129S1SvImJ_T0006584.1 MGP_129S1SvImJ_G0005464.1 mouse_genomes_project 13 52727738 52791260 + Gm2762 lincRNA lincRNA MGP_129S1SvImJ_T0006585.1 MGP_129S1SvImJ_G0005464.1 mouse_genomes_project 13 52728146 52729388 + Gm2762 lincRNA lincRNA MGP_129S1SvImJ_T0006586.1 MGP_129S1SvImJ_G0005464.1 mouse_genomes_project 13 52728340 52738580 + Gm2762 lincRNA lincRNA MGP_129S1SvImJ_T0006587.1 MGP_129S1SvImJ_G0005464.1 mouse_genomes_project 13 52728340 52734129 + Gm2762 lincRNA lincRNA MGP_129S1SvImJ_T0006588.1 MGP_129S1SvImJ_G0005464.1 mouse_genomes_project 13 52729384 52734145 + Gm2762 lincRNA lincRNA MGP_129S1SvImJ_T0006589.1 MGP_129S1SvImJ_G0005464.1 mouse_genomes_project 13 52736394 52739061 + Gm2762 lincRNA lincRNA MGP_129S1SvImJ_T0037066.1 MGP_129S1SvImJ_G0020569.1 mouse_genomes_project 13 53905328 53952567 + MGP_129S1SvImJ_P0037066 Simc1 protein_coding protein_coding MGP_129S1SvImJ_T0037067.1 MGP_129S1SvImJ_G0020569.1 mouse_genomes_project 13 53905328 53952567 + MGP_129S1SvImJ_P0037067 Simc1 protein_coding protein_coding MGP_129S1SvImJ_T0037068.1 MGP_129S1SvImJ_G0020569.1 mouse_genomes_project 13 53905353 53942039 + MGP_129S1SvImJ_P0037068 Simc1 protein_coding protein_coding MGP_129S1SvImJ_T0037069.1 MGP_129S1SvImJ_G0020569.1 mouse_genomes_project 13 53905358 53942038 + MGP_129S1SvImJ_P0037069 Simc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037070.1 MGP_129S1SvImJ_G0020569.1 mouse_genomes_project 13 53913673 53925826 + Simc1 protein_coding processed_transcript MGP_129S1SvImJ_T0037071.1 MGP_129S1SvImJ_G0020569.1 mouse_genomes_project 13 53930503 53942155 + Simc1 protein_coding retained_intron MGP_129S1SvImJ_T0037072.1 MGP_129S1SvImJ_G0020569.1 mouse_genomes_project 13 53947552 53952063 + Simc1 protein_coding retained_intron MGP_129S1SvImJ_T0100626.1 MGP_129S1SvImJ_G0038693.1 mouse_genomes_project 13 21780179 21780302 - Gm23340 snoRNA snoRNA MGP_129S1SvImJ_T0037648.1 MGP_129S1SvImJ_G0020783.1 mouse_genomes_project 13 78613707 78615100 + MGP_129S1SvImJ_P0037648 Pou5f2 protein_coding protein_coding MGP_129S1SvImJ_T0038194.1 MGP_129S1SvImJ_G0020942.1 mouse_genomes_project 13 115520526 115569659 + MGP_129S1SvImJ_P0038194 Dhx29 protein_coding protein_coding MGP_129S1SvImJ_T0036432.1 MGP_129S1SvImJ_G0020283.1 mouse_genomes_project 13 18805891 18806878 - MGP_129S1SvImJ_P0036432 protein_coding protein_coding MGP_129S1SvImJ_T0037998.1 MGP_129S1SvImJ_G0020886.1 mouse_genomes_project 13 102418802 102473949 - MGP_129S1SvImJ_P0037998 Ocln protein_coding protein_coding MGP_129S1SvImJ_T0037999.1 MGP_129S1SvImJ_G0020886.1 mouse_genomes_project 13 102432433 102473934 - MGP_129S1SvImJ_P0037999 Ocln protein_coding protein_coding MGP_129S1SvImJ_T0037169.1 MGP_129S1SvImJ_G0020586.1 mouse_genomes_project 13 54584933 54585520 - MGP_129S1SvImJ_P0037169 Gm17617 protein_coding protein_coding MGP_129S1SvImJ_T0036547.1 MGP_129S1SvImJ_G0020370.1 mouse_genomes_project 13 21286549 21310032 + MGP_129S1SvImJ_P0036547 Slc17a3 protein_coding protein_coding MGP_129S1SvImJ_T0102210.1 MGP_129S1SvImJ_G0040044.1 mouse_genomes_project 13 20625083 20626661 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0037017.1 MGP_129S1SvImJ_G0020554.1 mouse_genomes_project 13 50928397 51042110 - MGP_129S1SvImJ_P0037017 Sema4d protein_coding protein_coding MGP_129S1SvImJ_T0037018.1 MGP_129S1SvImJ_G0020554.1 mouse_genomes_project 13 50928397 51042184 - MGP_129S1SvImJ_P0037018 Sema4d protein_coding protein_coding MGP_129S1SvImJ_T0037019.1 MGP_129S1SvImJ_G0020554.1 mouse_genomes_project 13 50928401 50974933 - MGP_129S1SvImJ_P0037019 Sema4d protein_coding protein_coding MGP_129S1SvImJ_T0037020.1 MGP_129S1SvImJ_G0020554.1 mouse_genomes_project 13 50940247 50945429 - Sema4d protein_coding retained_intron MGP_129S1SvImJ_T0037021.1 MGP_129S1SvImJ_G0020554.1 mouse_genomes_project 13 50956110 50990382 - Sema4d protein_coding processed_transcript MGP_129S1SvImJ_T0037022.1 MGP_129S1SvImJ_G0020554.1 mouse_genomes_project 13 50956110 50990278 - Sema4d protein_coding processed_transcript MGP_129S1SvImJ_T0037023.1 MGP_129S1SvImJ_G0020554.1 mouse_genomes_project 13 50957684 50993628 - Sema4d protein_coding processed_transcript MGP_129S1SvImJ_T0037024.1 MGP_129S1SvImJ_G0020554.1 mouse_genomes_project 13 50957731 50996228 - Sema4d protein_coding processed_transcript MGP_129S1SvImJ_T0037025.1 MGP_129S1SvImJ_G0020554.1 mouse_genomes_project 13 50957751 50998265 - Sema4d protein_coding processed_transcript MGP_129S1SvImJ_T0037026.1 MGP_129S1SvImJ_G0020554.1 mouse_genomes_project 13 50957774 50998131 - Sema4d protein_coding processed_transcript MGP_129S1SvImJ_T0037027.1 MGP_129S1SvImJ_G0020554.1 mouse_genomes_project 13 50957801 50990189 - Sema4d protein_coding processed_transcript MGP_129S1SvImJ_T0037028.1 MGP_129S1SvImJ_G0020554.1 mouse_genomes_project 13 50957850 51022195 - Sema4d protein_coding processed_transcript MGP_129S1SvImJ_T0037029.1 MGP_129S1SvImJ_G0020554.1 mouse_genomes_project 13 50957883 51042101 - Sema4d protein_coding processed_transcript MGP_129S1SvImJ_T0009938.1 MGP_129S1SvImJ_G0008054.1 mouse_genomes_project 13 20929383 20929492 + n-TStga1 miRNA miRNA MGP_129S1SvImJ_T0036767.1 MGP_129S1SvImJ_G0020460.1 mouse_genomes_project 13 34160179 34171182 + Ppp1r3g protein_coding processed_transcript MGP_129S1SvImJ_T0036768.1 MGP_129S1SvImJ_G0020460.1 mouse_genomes_project 13 34170710 34173246 + MGP_129S1SvImJ_P0036768 Ppp1r3g protein_coding protein_coding MGP_129S1SvImJ_T0037498.1 MGP_129S1SvImJ_G0020715.1 mouse_genomes_project 13 67667564 67677955 - MGP_129S1SvImJ_P0037498 Zfp87 protein_coding protein_coding MGP_129S1SvImJ_T0037499.1 MGP_129S1SvImJ_G0020715.1 mouse_genomes_project 13 67669360 67677899 - MGP_129S1SvImJ_P0037499 Zfp87 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037500.1 MGP_129S1SvImJ_G0020715.1 mouse_genomes_project 13 67669765 67677924 - MGP_129S1SvImJ_P0037500 Zfp87 protein_coding protein_coding MGP_129S1SvImJ_T0037501.1 MGP_129S1SvImJ_G0020715.1 mouse_genomes_project 13 67672824 67677955 - MGP_129S1SvImJ_P0037501 Zfp87 protein_coding protein_coding MGP_129S1SvImJ_T0102185.1 MGP_129S1SvImJ_G0040019.1 mouse_genomes_project 13 19384683 19385199 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0009940.1 MGP_129S1SvImJ_G0008056.1 mouse_genomes_project 13 21194266 21195488 - miRNA miRNA MGP_129S1SvImJ_T0009949.1 MGP_129S1SvImJ_G0008065.1 mouse_genomes_project 13 47432232 47432326 - Mirlet7a-1 miRNA miRNA MGP_129S1SvImJ_T0038227.1 MGP_129S1SvImJ_G0020958.1 mouse_genomes_project 13 117572758 117678787 - MGP_129S1SvImJ_P0038227 Itga2 protein_coding protein_coding MGP_129S1SvImJ_T0037913.1 MGP_129S1SvImJ_G0020857.1 mouse_genomes_project 13 98726266 98734535 - MGP_129S1SvImJ_P0037913 Nsa2 protein_coding protein_coding MGP_129S1SvImJ_T0037803.1 MGP_129S1SvImJ_G0020814.1 mouse_genomes_project 13 93651508 93686453 + MGP_129S1SvImJ_P0037803 Dhfr protein_coding protein_coding MGP_129S1SvImJ_T0036916.1 MGP_129S1SvImJ_G0020519.1 mouse_genomes_project 13 45850680 45893879 + MGP_129S1SvImJ_P0036916 Kdm1b protein_coding protein_coding MGP_129S1SvImJ_T0036917.1 MGP_129S1SvImJ_G0020519.1 mouse_genomes_project 13 45850751 45860897 + MGP_129S1SvImJ_P0036917 Kdm1b protein_coding protein_coding MGP_129S1SvImJ_T0036918.1 MGP_129S1SvImJ_G0020519.1 mouse_genomes_project 13 45850761 45893887 + MGP_129S1SvImJ_P0036918 Kdm1b protein_coding protein_coding MGP_129S1SvImJ_T0036919.1 MGP_129S1SvImJ_G0020519.1 mouse_genomes_project 13 45873437 45881565 + Kdm1b protein_coding retained_intron MGP_129S1SvImJ_T0036920.1 MGP_129S1SvImJ_G0020519.1 mouse_genomes_project 13 45875752 45893892 + Kdm1b protein_coding processed_transcript MGP_129S1SvImJ_T0012889.1 MGP_129S1SvImJ_G0010978.1 mouse_genomes_project 13 19266367 19266943 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036823.1 MGP_129S1SvImJ_G0020484.1 mouse_genomes_project 13 39582305 39590847 - MGP_129S1SvImJ_P0036823 Gcm2 protein_coding protein_coding MGP_129S1SvImJ_T0036349.1 MGP_129S1SvImJ_G0020243.1 mouse_genomes_project 13 11195424 11504474 - MGP_129S1SvImJ_P0036349 Hecw1 protein_coding protein_coding MGP_129S1SvImJ_T0036645.1 MGP_129S1SvImJ_G0020409.1 mouse_genomes_project 13 26740308 26745100 - MGP_129S1SvImJ_P0036645 Sox4 protein_coding protein_coding MGP_129S1SvImJ_T0000923.1 MGP_129S1SvImJ_G0000855.1 mouse_genomes_project 13 103741754 103743923 - TEC TEC MGP_129S1SvImJ_T0012905.1 MGP_129S1SvImJ_G0010994.1 mouse_genomes_project 13 22636671 22636989 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000898.1 MGP_129S1SvImJ_G0000831.1 mouse_genomes_project 13 16554536 16556874 - TEC TEC MGP_129S1SvImJ_T0012903.1 MGP_129S1SvImJ_G0010992.1 mouse_genomes_project 13 21783671 21784118 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0037356.1 MGP_129S1SvImJ_G0020651.1 mouse_genomes_project 13 60625472 60644777 - MGP_129S1SvImJ_P0037356 4930486L24Rik protein_coding protein_coding MGP_129S1SvImJ_T0098316.1 MGP_129S1SvImJ_G0036401.1 mouse_genomes_project 13 112061235 112061632 + pseudogene pseudogene MGP_129S1SvImJ_T0012941.1 MGP_129S1SvImJ_G0011030.1 mouse_genomes_project 13 67824795 67825602 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038262.1 MGP_129S1SvImJ_G0020974.1 mouse_genomes_project 13 122517934 122521872 + MGP_129S1SvImJ_P0038262 protein_coding protein_coding MGP_129S1SvImJ_T0006556.1 MGP_129S1SvImJ_G0005444.1 mouse_genomes_project 13 30344001 30352476 - lincRNA lincRNA MGP_129S1SvImJ_T0037184.1 MGP_129S1SvImJ_G0020595.1 mouse_genomes_project 13 54894352 54894766 - MGP_129S1SvImJ_P0037184 Pfn3 protein_coding protein_coding MGP_129S1SvImJ_T0037645.1 MGP_129S1SvImJ_G0020781.1 mouse_genomes_project 13 77699377 78158095 + MGP_129S1SvImJ_P0037645 2210408I21Rik protein_coding protein_coding MGP_129S1SvImJ_T0037038.1 MGP_129S1SvImJ_G0020558.1 mouse_genomes_project 13 52132164 52231252 - MGP_129S1SvImJ_P0037038 Auh protein_coding protein_coding MGP_129S1SvImJ_T0037039.1 MGP_129S1SvImJ_G0020558.1 mouse_genomes_project 13 52132164 52220855 - MGP_129S1SvImJ_P0037039 Auh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037040.1 MGP_129S1SvImJ_G0020558.1 mouse_genomes_project 13 52137902 52231049 - MGP_129S1SvImJ_P0037040 Auh protein_coding protein_coding MGP_129S1SvImJ_T0037041.1 MGP_129S1SvImJ_G0020558.1 mouse_genomes_project 13 52185163 52231239 - Auh protein_coding retained_intron MGP_129S1SvImJ_T0037042.1 MGP_129S1SvImJ_G0020558.1 mouse_genomes_project 13 52195374 52231243 - MGP_129S1SvImJ_P0037042 Auh protein_coding protein_coding MGP_129S1SvImJ_T0037043.1 MGP_129S1SvImJ_G0020558.1 mouse_genomes_project 13 52196150 52225498 - Auh protein_coding processed_transcript MGP_129S1SvImJ_T0037044.1 MGP_129S1SvImJ_G0020558.1 mouse_genomes_project 13 52207834 52231245 - MGP_129S1SvImJ_P0037044 Auh protein_coding protein_coding MGP_129S1SvImJ_T0037045.1 MGP_129S1SvImJ_G0020558.1 mouse_genomes_project 13 52209684 52225477 - Auh protein_coding processed_transcript MGP_129S1SvImJ_T0037046.1 MGP_129S1SvImJ_G0020558.1 mouse_genomes_project 13 52209695 52220891 - Auh protein_coding processed_transcript MGP_129S1SvImJ_T0037047.1 MGP_129S1SvImJ_G0020558.1 mouse_genomes_project 13 52210997 52231272 - MGP_129S1SvImJ_P0037047 Auh protein_coding protein_coding MGP_129S1SvImJ_T0037048.1 MGP_129S1SvImJ_G0020558.1 mouse_genomes_project 13 52214468 52225501 - Auh protein_coding processed_transcript MGP_129S1SvImJ_T0037049.1 MGP_129S1SvImJ_G0020558.1 mouse_genomes_project 13 52220398 52225493 - Auh protein_coding retained_intron MGP_129S1SvImJ_T0037050.1 MGP_129S1SvImJ_G0020558.1 mouse_genomes_project 13 52230078 52231243 - Auh protein_coding processed_transcript MGP_129S1SvImJ_T0036971.1 MGP_129S1SvImJ_G0020535.1 mouse_genomes_project 13 48395554 48439240 + MGP_129S1SvImJ_P0036971 Ippk protein_coding protein_coding MGP_129S1SvImJ_T0102198.1 MGP_129S1SvImJ_G0040032.1 mouse_genomes_project 13 19989412 19990506 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0036428.1 MGP_129S1SvImJ_G0020281.1 mouse_genomes_project 13 18783379 18799999 - MGP_129S1SvImJ_P0036428 Zkscan8 protein_coding protein_coding MGP_129S1SvImJ_T0036429.1 MGP_129S1SvImJ_G0020281.1 mouse_genomes_project 13 18790694 18799911 - MGP_129S1SvImJ_P0036429 Zkscan8 protein_coding protein_coding MGP_129S1SvImJ_T0036430.1 MGP_129S1SvImJ_G0020281.1 mouse_genomes_project 13 18795312 18799952 - MGP_129S1SvImJ_P0036430 Zkscan8 protein_coding protein_coding MGP_129S1SvImJ_T0012957.1 MGP_129S1SvImJ_G0011046.1 mouse_genomes_project 13 80774911 80776076 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017371.1 MGP_129S1SvImJ_G0015245.1 mouse_genomes_project 13 12409144 12430822 - Gm6556 processed_transcript antisense MGP_129S1SvImJ_T0017372.1 MGP_129S1SvImJ_G0015245.1 mouse_genomes_project 13 12429968 12431873 - Gm6556 processed_transcript TEC MGP_129S1SvImJ_T0036757.1 MGP_129S1SvImJ_G0020457.1 mouse_genomes_project 13 33123235 33144005 - MGP_129S1SvImJ_P0036757 Eci2 protein_coding protein_coding MGP_129S1SvImJ_T0036758.1 MGP_129S1SvImJ_G0020457.1 mouse_genomes_project 13 33124195 33135921 - Eci2 protein_coding processed_transcript MGP_129S1SvImJ_T0036759.1 MGP_129S1SvImJ_G0020457.1 mouse_genomes_project 13 33125745 33136664 - Eci2 protein_coding processed_transcript MGP_129S1SvImJ_T0036760.1 MGP_129S1SvImJ_G0020457.1 mouse_genomes_project 13 33132994 33135455 - Eci2 protein_coding retained_intron MGP_129S1SvImJ_T0036301.1 MGP_129S1SvImJ_G0020227.1 mouse_genomes_project 13 8241262 8831279 - MGP_129S1SvImJ_P0036301 Ryr2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0036302.1 MGP_129S1SvImJ_G0020227.1 mouse_genomes_project 13 8241272 8831778 - MGP_129S1SvImJ_P0036302 Ryr2 protein_coding protein_coding MGP_129S1SvImJ_T0036303.1 MGP_129S1SvImJ_G0020227.1 mouse_genomes_project 13 8241272 8831778 - MGP_129S1SvImJ_P0036303 Ryr2 protein_coding protein_coding MGP_129S1SvImJ_T0098314.1 MGP_129S1SvImJ_G0036399.1 mouse_genomes_project 13 90747897 90751181 - pseudogene pseudogene MGP_129S1SvImJ_T0036398.1 MGP_129S1SvImJ_G0020266.1 mouse_genomes_project 13 18303756 18304707 - MGP_129S1SvImJ_P0036398 Olfr1370 protein_coding protein_coding MGP_129S1SvImJ_T0012949.1 MGP_129S1SvImJ_G0011038.1 mouse_genomes_project 13 74511202 74512544 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0037248.1 MGP_129S1SvImJ_G0020620.1 mouse_genomes_project 13 56082687 56089387 + MGP_129S1SvImJ_P0037248 Fbxl21 protein_coding protein_coding MGP_129S1SvImJ_T0037249.1 MGP_129S1SvImJ_G0020620.1 mouse_genomes_project 13 56082706 56099872 + MGP_129S1SvImJ_P0037249 Fbxl21 protein_coding protein_coding MGP_129S1SvImJ_T0037250.1 MGP_129S1SvImJ_G0020620.1 mouse_genomes_project 13 56082723 56099760 + MGP_129S1SvImJ_P0037250 Fbxl21 protein_coding protein_coding MGP_129S1SvImJ_T0037251.1 MGP_129S1SvImJ_G0020620.1 mouse_genomes_project 13 56082728 56092006 + MGP_129S1SvImJ_P0037251 Fbxl21 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0011372.1 MGP_129S1SvImJ_G0009488.1 mouse_genomes_project 13 43985360 43985703 - Gm23755 misc_RNA misc_RNA MGP_129S1SvImJ_T0102187.1 MGP_129S1SvImJ_G0040021.1 mouse_genomes_project 13 19416004 19416318 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0036894.1 MGP_129S1SvImJ_G0020510.1 mouse_genomes_project 13 44941054 44956609 - MGP_129S1SvImJ_P0036894 Gm10113 protein_coding protein_coding MGP_129S1SvImJ_T0098310.1 MGP_129S1SvImJ_G0036395.1 mouse_genomes_project 13 9513879 9514286 - pseudogene pseudogene MGP_129S1SvImJ_T0012951.1 MGP_129S1SvImJ_G0011040.1 mouse_genomes_project 13 76467380 76468245 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038203.1 MGP_129S1SvImJ_G0020947.1 mouse_genomes_project 13 115649890 115655003 - MGP_129S1SvImJ_P0038203 Gpx8 protein_coding protein_coding MGP_129S1SvImJ_T0006549.1 MGP_129S1SvImJ_G0005440.1 mouse_genomes_project 13 29288705 29323578 - Gm11375 lincRNA lincRNA MGP_129S1SvImJ_T0006550.1 MGP_129S1SvImJ_G0005440.1 mouse_genomes_project 13 29322063 29323620 - Gm11375 lincRNA lincRNA MGP_129S1SvImJ_T0037430.1 MGP_129S1SvImJ_G0020680.1 mouse_genomes_project 13 64506088 64524339 - MGP_129S1SvImJ_P0037430 1190003K10Rik protein_coding protein_coding MGP_129S1SvImJ_T0036519.1 MGP_129S1SvImJ_G0020349.1 mouse_genomes_project 13 20972027 20973125 + MGP_129S1SvImJ_P0036519 Hist1h1d protein_coding protein_coding MGP_129S1SvImJ_T0036906.1 MGP_129S1SvImJ_G0020516.1 mouse_genomes_project 13 45530619 45730299 - MGP_129S1SvImJ_P0036906 Kif13a protein_coding protein_coding MGP_129S1SvImJ_T0036907.1 MGP_129S1SvImJ_G0020516.1 mouse_genomes_project 13 45530620 45729207 - MGP_129S1SvImJ_P0036907 Kif13a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0012877.1 MGP_129S1SvImJ_G0010966.1 mouse_genomes_project 13 5560053 5560695 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036503.1 MGP_129S1SvImJ_G0020339.1 mouse_genomes_project 13 20629969 20630876 - MGP_129S1SvImJ_P0036503 Vmn1r188 protein_coding protein_coding MGP_129S1SvImJ_T0009977.1 MGP_129S1SvImJ_G0008093.1 mouse_genomes_project 13 97889292 97889405 + Gm25213 miRNA miRNA MGP_129S1SvImJ_T0009937.1 MGP_129S1SvImJ_G0008053.1 mouse_genomes_project 13 19416071 19416165 - Gm22758 miRNA miRNA MGP_129S1SvImJ_T0006559.1 MGP_129S1SvImJ_G0005446.1 mouse_genomes_project 13 35681986 35684433 - Gm4035 lincRNA lincRNA MGP_129S1SvImJ_T0006560.1 MGP_129S1SvImJ_G0005446.1 mouse_genomes_project 13 35682098 35695273 - Gm4035 lincRNA lincRNA MGP_129S1SvImJ_T0038208.1 MGP_129S1SvImJ_G0020950.1 mouse_genomes_project 13 115833721 115842135 + MGP_129S1SvImJ_P0038208 Esm1 protein_coding protein_coding MGP_129S1SvImJ_T0102188.1 MGP_129S1SvImJ_G0040022.1 mouse_genomes_project 13 19469468 19470064 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0037845.1 MGP_129S1SvImJ_G0020831.1 mouse_genomes_project 13 95608649 95692583 - MGP_129S1SvImJ_P0037845 Scamp1 protein_coding protein_coding MGP_129S1SvImJ_T0037846.1 MGP_129S1SvImJ_G0020831.1 mouse_genomes_project 13 95629712 95671338 - MGP_129S1SvImJ_P0037846 Scamp1 protein_coding protein_coding MGP_129S1SvImJ_T0038008.1 MGP_129S1SvImJ_G0020890.1 mouse_genomes_project 13 102578883 102584656 + MGP_129S1SvImJ_P0038008 Taf9 protein_coding protein_coding MGP_129S1SvImJ_T0037536.1 MGP_129S1SvImJ_G0020736.1 mouse_genomes_project 13 70896770 70948293 - MGP_129S1SvImJ_P0037536 Ice1 protein_coding protein_coding MGP_129S1SvImJ_T0012969.1 MGP_129S1SvImJ_G0011058.1 mouse_genomes_project 13 102704730 102705039 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098488.1 MGP_129S1SvImJ_G0036573.1 mouse_genomes_project 13 98463360 98463475 + Gm27792 rRNA rRNA MGP_129S1SvImJ_T0037527.1 MGP_129S1SvImJ_G0020733.1 mouse_genomes_project 13 69848254 69888763 - MGP_129S1SvImJ_P0037527 Srd5a1 protein_coding protein_coding MGP_129S1SvImJ_T0037528.1 MGP_129S1SvImJ_G0020733.1 mouse_genomes_project 13 69867232 69888669 - Srd5a1 protein_coding processed_transcript MGP_129S1SvImJ_T0036437.1 MGP_129S1SvImJ_G0020286.1 mouse_genomes_project 13 18887028 18888013 - MGP_129S1SvImJ_P0036437 Olfr1362 protein_coding protein_coding MGP_129S1SvImJ_T0038105.1 MGP_129S1SvImJ_G0020917.1 mouse_genomes_project 13 109141344 109154501 + MGP_129S1SvImJ_P0038105 Dimt1 protein_coding protein_coding MGP_129S1SvImJ_T0036358.1 MGP_129S1SvImJ_G0020248.1 mouse_genomes_project 13 12992601 13007922 + MGP_129S1SvImJ_P0036358 Inhba protein_coding protein_coding MGP_129S1SvImJ_T0036359.1 MGP_129S1SvImJ_G0020248.1 mouse_genomes_project 13 12995234 13007945 + MGP_129S1SvImJ_P0036359 Inhba protein_coding protein_coding MGP_129S1SvImJ_T0100645.1 MGP_129S1SvImJ_G0038712.1 mouse_genomes_project 13 76446721 76446851 + Gm24163 snoRNA snoRNA MGP_129S1SvImJ_T0036859.1 MGP_129S1SvImJ_G0020497.1 mouse_genomes_project 13 41779553 41891198 - MGP_129S1SvImJ_P0036859 Gfod1 protein_coding protein_coding MGP_129S1SvImJ_T0036467.1 MGP_129S1SvImJ_G0020306.1 mouse_genomes_project 13 19321713 19329282 - MGP_129S1SvImJ_P0036467 Prss16 protein_coding protein_coding MGP_129S1SvImJ_T0036468.1 MGP_129S1SvImJ_G0020306.1 mouse_genomes_project 13 19322097 19324760 - Prss16 protein_coding processed_transcript MGP_129S1SvImJ_T0036469.1 MGP_129S1SvImJ_G0020306.1 mouse_genomes_project 13 19322463 19325956 - Prss16 protein_coding processed_transcript MGP_129S1SvImJ_T0036470.1 MGP_129S1SvImJ_G0020306.1 mouse_genomes_project 13 19326772 19329283 - Prss16 protein_coding processed_transcript MGP_129S1SvImJ_T0036241.1 MGP_129S1SvImJ_G0020217.1 mouse_genomes_project 13 4807252 5384819 + MGP_129S1SvImJ_P0036241 Adarb2 protein_coding protein_coding MGP_129S1SvImJ_T0036242.1 MGP_129S1SvImJ_G0020217.1 mouse_genomes_project 13 4807294 4939645 + MGP_129S1SvImJ_P0036242 Adarb2 protein_coding protein_coding MGP_129S1SvImJ_T0036243.1 MGP_129S1SvImJ_G0020217.1 mouse_genomes_project 13 4807299 5386487 + MGP_129S1SvImJ_P0036243 Adarb2 protein_coding protein_coding MGP_129S1SvImJ_T0036244.1 MGP_129S1SvImJ_G0020217.1 mouse_genomes_project 13 5158570 5380691 + MGP_129S1SvImJ_P0036244 Adarb2 protein_coding protein_coding MGP_129S1SvImJ_T0006627.1 MGP_129S1SvImJ_G0005492.1 mouse_genomes_project 13 95537423 95540094 - Gm15907 lincRNA lincRNA MGP_129S1SvImJ_T0036457.1 MGP_129S1SvImJ_G0020302.1 mouse_genomes_project 13 19129011 19131254 - MGP_129S1SvImJ_P0036457 Hist1h4n protein_coding protein_coding MGP_129S1SvImJ_T0037534.1 MGP_129S1SvImJ_G0020734.1 mouse_genomes_project 13 69981504 70020994 - MGP_129S1SvImJ_P0037534 protein_coding protein_coding MGP_129S1SvImJ_T0006604.1 MGP_129S1SvImJ_G0005476.1 mouse_genomes_project 13 67777857 67779584 - Gm37276 lincRNA lincRNA MGP_129S1SvImJ_T0036266.1 MGP_129S1SvImJ_G0020220.1 mouse_genomes_project 13 5574308 5584077 + MGP_129S1SvImJ_P0036266 Idi2 protein_coding protein_coding MGP_129S1SvImJ_T0036366.1 MGP_129S1SvImJ_G0020255.1 mouse_genomes_project 13 15202807 15473035 - MGP_129S1SvImJ_P0036366 Pou6f2 protein_coding protein_coding MGP_129S1SvImJ_T0036367.1 MGP_129S1SvImJ_G0020255.1 mouse_genomes_project 13 15206799 15473035 - MGP_129S1SvImJ_P0036367 Pou6f2 protein_coding protein_coding MGP_129S1SvImJ_T0036368.1 MGP_129S1SvImJ_G0020255.1 mouse_genomes_project 13 15206830 15257083 - MGP_129S1SvImJ_P0036368 Pou6f2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036369.1 MGP_129S1SvImJ_G0020255.1 mouse_genomes_project 13 15223528 15271851 - Pou6f2 protein_coding processed_transcript MGP_129S1SvImJ_T0036370.1 MGP_129S1SvImJ_G0020255.1 mouse_genomes_project 13 15223528 15257088 - MGP_129S1SvImJ_P0036370 Pou6f2 protein_coding protein_coding MGP_129S1SvImJ_T0036371.1 MGP_129S1SvImJ_G0020255.1 mouse_genomes_project 13 15232882 15473035 - Pou6f2 protein_coding processed_transcript MGP_129S1SvImJ_T0037550.1 MGP_129S1SvImJ_G0020742.1 mouse_genomes_project 13 73746775 73748745 + MGP_129S1SvImJ_P0037550 Gm10263 protein_coding protein_coding MGP_129S1SvImJ_T0003507.1 MGP_129S1SvImJ_G0003202.1 mouse_genomes_project 13 85113269 85115863 - A230107N01Rik antisense antisense MGP_129S1SvImJ_T0003508.1 MGP_129S1SvImJ_G0003202.1 mouse_genomes_project 13 85114297 85115788 - A230107N01Rik antisense antisense MGP_129S1SvImJ_T0037808.1 MGP_129S1SvImJ_G0020817.1 mouse_genomes_project 13 93790802 93839948 - MGP_129S1SvImJ_P0037808 Zfyve16 protein_coding protein_coding MGP_129S1SvImJ_T0037809.1 MGP_129S1SvImJ_G0020817.1 mouse_genomes_project 13 93791541 93821592 - Zfyve16 protein_coding retained_intron MGP_129S1SvImJ_T0037810.1 MGP_129S1SvImJ_G0020817.1 mouse_genomes_project 13 93812673 93814134 - Zfyve16 protein_coding retained_intron MGP_129S1SvImJ_T0037811.1 MGP_129S1SvImJ_G0020817.1 mouse_genomes_project 13 93818304 93827506 - Zfyve16 protein_coding processed_transcript MGP_129S1SvImJ_T0011371.1 MGP_129S1SvImJ_G0009487.1 mouse_genomes_project 13 41620876 41621139 - Gm26086 misc_RNA misc_RNA MGP_129S1SvImJ_T0006579.1 MGP_129S1SvImJ_G0005461.1 mouse_genomes_project 13 47429576 47431876 - 6720427I07Rik lincRNA lincRNA MGP_129S1SvImJ_T0100635.1 MGP_129S1SvImJ_G0038702.1 mouse_genomes_project 13 48667572 48667705 + Gm25394 snoRNA snoRNA MGP_129S1SvImJ_T0036215.1 MGP_129S1SvImJ_G0020208.1 mouse_genomes_project 13 965679 1000729 - MGP_129S1SvImJ_P0036215 Akr1c20 protein_coding protein_coding MGP_129S1SvImJ_T0036216.1 MGP_129S1SvImJ_G0020208.1 mouse_genomes_project 13 984652 1000744 - MGP_129S1SvImJ_P0036216 Akr1c20 protein_coding protein_coding MGP_129S1SvImJ_T0036538.1 MGP_129S1SvImJ_G0020364.1 mouse_genomes_project 13 21200919 21201316 + MGP_129S1SvImJ_P0036538 Hist1h4b protein_coding protein_coding MGP_129S1SvImJ_T0099355.1 MGP_129S1SvImJ_G0037422.1 mouse_genomes_project 13 28001060 28001244 - Gm23206 snRNA snRNA MGP_129S1SvImJ_T0012948.1 MGP_129S1SvImJ_G0011037.1 mouse_genomes_project 13 74312177 74312621 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0037878.1 MGP_129S1SvImJ_G0020843.1 mouse_genomes_project 13 97083962 97102299 - MGP_129S1SvImJ_P0037878 F2r protein_coding protein_coding MGP_129S1SvImJ_T0037440.1 MGP_129S1SvImJ_G0020687.1 mouse_genomes_project 13 65178999 65179926 + MGP_129S1SvImJ_P0037440 Olfr466 protein_coding protein_coding MGP_129S1SvImJ_T0037764.1 MGP_129S1SvImJ_G0020806.1 mouse_genomes_project 13 92161412 92477572 - MGP_129S1SvImJ_P0037764 Atg10 protein_coding protein_coding MGP_129S1SvImJ_T0038018.1 MGP_129S1SvImJ_G0020894.1 mouse_genomes_project 13 102694385 102710166 - MGP_129S1SvImJ_P0038018 Cenph protein_coding protein_coding MGP_129S1SvImJ_T0038019.1 MGP_129S1SvImJ_G0020894.1 mouse_genomes_project 13 102706459 102710050 - Cenph protein_coding retained_intron MGP_129S1SvImJ_T0037849.1 MGP_129S1SvImJ_G0020834.1 mouse_genomes_project 13 96216265 96281560 + MGP_129S1SvImJ_P0037849 Tbca protein_coding protein_coding MGP_129S1SvImJ_T0037423.1 MGP_129S1SvImJ_G0020676.1 mouse_genomes_project 13 64212916 64296290 - MGP_129S1SvImJ_P0037423 Cdc14b protein_coding protein_coding MGP_129S1SvImJ_T0037424.1 MGP_129S1SvImJ_G0020676.1 mouse_genomes_project 13 64212916 64268994 - MGP_129S1SvImJ_P0037424 Cdc14b protein_coding protein_coding MGP_129S1SvImJ_T0037425.1 MGP_129S1SvImJ_G0020676.1 mouse_genomes_project 13 64215714 64296196 - MGP_129S1SvImJ_P0037425 Cdc14b protein_coding protein_coding MGP_129S1SvImJ_T0037426.1 MGP_129S1SvImJ_G0020676.1 mouse_genomes_project 13 64216992 64296067 - MGP_129S1SvImJ_P0037426 Cdc14b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0102199.1 MGP_129S1SvImJ_G0040033.1 mouse_genomes_project 13 20043732 20044729 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0009985.1 MGP_129S1SvImJ_G0008101.1 mouse_genomes_project 13 117300086 117300189 + Gm25950 miRNA miRNA MGP_129S1SvImJ_T0036542.1 MGP_129S1SvImJ_G0020368.1 mouse_genomes_project 13 21228911 21237801 + MGP_129S1SvImJ_P0036542 Trim38 protein_coding protein_coding MGP_129S1SvImJ_T0009960.1 MGP_129S1SvImJ_G0008076.1 mouse_genomes_project 13 62688083 62688166 + Gm24588 miRNA miRNA MGP_129S1SvImJ_T0037463.1 MGP_129S1SvImJ_G0020697.1 mouse_genomes_project 13 67170700 67201690 - protein_coding processed_transcript MGP_129S1SvImJ_T0037464.1 MGP_129S1SvImJ_G0020697.1 mouse_genomes_project 13 67170700 67212344 - MGP_129S1SvImJ_P0037464 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037465.1 MGP_129S1SvImJ_G0020697.1 mouse_genomes_project 13 67170701 67201775 - MGP_129S1SvImJ_P0037465 protein_coding protein_coding MGP_129S1SvImJ_T0037467.1 MGP_129S1SvImJ_G0020697.1 mouse_genomes_project 13 67175237 67201775 - protein_coding processed_transcript MGP_129S1SvImJ_T0037469.1 MGP_129S1SvImJ_G0020697.1 mouse_genomes_project 13 67209203 67212399 - protein_coding processed_transcript MGP_129S1SvImJ_T0038212.1 MGP_129S1SvImJ_G0020952.1 mouse_genomes_project 13 116239929 116266297 - MGP_129S1SvImJ_P0038212 Snx18 protein_coding protein_coding MGP_129S1SvImJ_T0037928.1 MGP_129S1SvImJ_G0020861.1 mouse_genomes_project 13 99574914 99901639 - MGP_129S1SvImJ_P0037928 Arhgef28 protein_coding protein_coding MGP_129S1SvImJ_T0036489.1 MGP_129S1SvImJ_G0020325.1 mouse_genomes_project 13 20043732 20044729 - MGP_129S1SvImJ_P0036489 Vmn1r208 protein_coding protein_coding MGP_129S1SvImJ_T0037283.1 MGP_129S1SvImJ_G0020633.1 mouse_genomes_project 13 58032606 58042717 - MGP_129S1SvImJ_P0037283 Hnrnpk protein_coding protein_coding MGP_129S1SvImJ_T0037284.1 MGP_129S1SvImJ_G0020633.1 mouse_genomes_project 13 58034511 58042308 - MGP_129S1SvImJ_P0037284 Hnrnpk protein_coding protein_coding MGP_129S1SvImJ_T0037285.1 MGP_129S1SvImJ_G0020633.1 mouse_genomes_project 13 58034703 58035884 - Hnrnpk protein_coding retained_intron MGP_129S1SvImJ_T0037286.1 MGP_129S1SvImJ_G0020633.1 mouse_genomes_project 13 58034766 58037229 - Hnrnpk protein_coding retained_intron MGP_129S1SvImJ_T0037287.1 MGP_129S1SvImJ_G0020633.1 mouse_genomes_project 13 58034824 58042269 - MGP_129S1SvImJ_P0037287 Hnrnpk protein_coding protein_coding MGP_129S1SvImJ_T0037288.1 MGP_129S1SvImJ_G0020633.1 mouse_genomes_project 13 58034853 58037110 - Hnrnpk protein_coding retained_intron MGP_129S1SvImJ_T0037289.1 MGP_129S1SvImJ_G0020633.1 mouse_genomes_project 13 58035358 58042673 - MGP_129S1SvImJ_P0037289 Hnrnpk protein_coding protein_coding MGP_129S1SvImJ_T0037290.1 MGP_129S1SvImJ_G0020633.1 mouse_genomes_project 13 58035428 58038181 - Hnrnpk protein_coding retained_intron MGP_129S1SvImJ_T0037291.1 MGP_129S1SvImJ_G0020633.1 mouse_genomes_project 13 58035433 58038181 - MGP_129S1SvImJ_P0037291 Hnrnpk protein_coding protein_coding MGP_129S1SvImJ_T0037292.1 MGP_129S1SvImJ_G0020633.1 mouse_genomes_project 13 58036052 58042276 - Hnrnpk protein_coding retained_intron MGP_129S1SvImJ_T0037293.1 MGP_129S1SvImJ_G0020633.1 mouse_genomes_project 13 58037200 58042282 - MGP_129S1SvImJ_P0037293 Hnrnpk protein_coding protein_coding MGP_129S1SvImJ_T0037294.1 MGP_129S1SvImJ_G0020633.1 mouse_genomes_project 13 58038889 58042668 - Hnrnpk protein_coding retained_intron MGP_129S1SvImJ_T0036737.1 MGP_129S1SvImJ_G0020447.1 mouse_genomes_project 13 32181850 32185991 - MGP_129S1SvImJ_P0036737 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0037151.1 MGP_129S1SvImJ_G0020584.1 mouse_genomes_project 13 54463883 54547912 - MGP_129S1SvImJ_P0037151 Uimc1 protein_coding protein_coding MGP_129S1SvImJ_T0037152.1 MGP_129S1SvImJ_G0020584.1 mouse_genomes_project 13 54463883 54547907 - MGP_129S1SvImJ_P0037152 Uimc1 protein_coding protein_coding MGP_129S1SvImJ_T0037153.1 MGP_129S1SvImJ_G0020584.1 mouse_genomes_project 13 54464198 54547866 - MGP_129S1SvImJ_P0037153 Uimc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037154.1 MGP_129S1SvImJ_G0020584.1 mouse_genomes_project 13 54464298 54547912 - MGP_129S1SvImJ_P0037154 Uimc1 protein_coding protein_coding MGP_129S1SvImJ_T0037155.1 MGP_129S1SvImJ_G0020584.1 mouse_genomes_project 13 54464321 54541404 - MGP_129S1SvImJ_P0037155 Uimc1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0037156.1 MGP_129S1SvImJ_G0020584.1 mouse_genomes_project 13 54520045 54547911 - Uimc1 protein_coding retained_intron MGP_129S1SvImJ_T0037157.1 MGP_129S1SvImJ_G0020584.1 mouse_genomes_project 13 54530334 54540718 - Uimc1 protein_coding retained_intron MGP_129S1SvImJ_T0102186.1 MGP_129S1SvImJ_G0040020.1 mouse_genomes_project 13 19406986 19407418 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0038078.1 MGP_129S1SvImJ_G0020907.1 mouse_genomes_project 13 106323754 106346144 + MGP_129S1SvImJ_P0038078 Cenpk protein_coding protein_coding MGP_129S1SvImJ_T0038079.1 MGP_129S1SvImJ_G0020907.1 mouse_genomes_project 13 106324187 106348316 + MGP_129S1SvImJ_P0038079 Cenpk protein_coding protein_coding MGP_129S1SvImJ_T0037253.1 MGP_129S1SvImJ_G0020622.1 mouse_genomes_project 13 56177851 56207570 + MGP_129S1SvImJ_P0037253 Tgfbi protein_coding protein_coding MGP_129S1SvImJ_T0036534.1 MGP_129S1SvImJ_G0020360.1 mouse_genomes_project 13 21179770 21181334 + MGP_129S1SvImJ_P0036534 Hist1h1c protein_coding protein_coding MGP_129S1SvImJ_T0009932.1 MGP_129S1SvImJ_G0008048.1 mouse_genomes_project 13 18994063 18994205 + Gm44357 miRNA miRNA MGP_129S1SvImJ_T0037173.1 MGP_129S1SvImJ_G0020588.1 mouse_genomes_project 13 54667954 54782402 + MGP_129S1SvImJ_P0037173 Nsd1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0036771.1 MGP_129S1SvImJ_G0020463.1 mouse_genomes_project 13 34955713 34967654 - MGP_129S1SvImJ_P0036771 Nrn1 protein_coding protein_coding MGP_129S1SvImJ_T0036772.1 MGP_129S1SvImJ_G0020463.1 mouse_genomes_project 13 34956546 34961899 - MGP_129S1SvImJ_P0036772 Nrn1 protein_coding protein_coding MGP_129S1SvImJ_T0009970.1 MGP_129S1SvImJ_G0008086.1 mouse_genomes_project 13 85074630 85074697 + Gm24331 miRNA miRNA MGP_129S1SvImJ_T0036753.1 MGP_129S1SvImJ_G0020455.1 mouse_genomes_project 13 33065216 33098558 + MGP_129S1SvImJ_P0036753 4933417A18Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036754.1 MGP_129S1SvImJ_G0020455.1 mouse_genomes_project 13 33065216 33095880 + MGP_129S1SvImJ_P0036754 4933417A18Rik protein_coding protein_coding MGP_129S1SvImJ_T0036365.1 MGP_129S1SvImJ_G0020254.1 mouse_genomes_project 13 15055485 15064035 - MGP_129S1SvImJ_P0036365 protein_coding protein_coding MGP_129S1SvImJ_T0036203.1 MGP_129S1SvImJ_G0020203.1 mouse_genomes_project 13 617075 634855 - MGP_129S1SvImJ_P0036203 Akr1c18 protein_coding protein_coding MGP_129S1SvImJ_T0036204.1 MGP_129S1SvImJ_G0020203.1 mouse_genomes_project 13 617075 634881 - MGP_129S1SvImJ_P0036204 Akr1c18 protein_coding protein_coding MGP_129S1SvImJ_T0036704.1 MGP_129S1SvImJ_G0020436.1 mouse_genomes_project 13 31214838 31223285 + MGP_129S1SvImJ_P0036704 protein_coding protein_coding MGP_129S1SvImJ_T0038229.1 MGP_129S1SvImJ_G0020960.1 mouse_genomes_project 13 117852825 117856246 - MGP_129S1SvImJ_P0038229 Pelo protein_coding protein_coding MGP_129S1SvImJ_T0102225.1 MGP_129S1SvImJ_G0040059.1 mouse_genomes_project 13 31849990 31853770 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0009948.1 MGP_129S1SvImJ_G0008064.1 mouse_genomes_project 13 47431882 47431971 - Mirlet7f-1 miRNA miRNA MGP_129S1SvImJ_T0012937.1 MGP_129S1SvImJ_G0011026.1 mouse_genomes_project 13 63404517 63404853 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012892.1 MGP_129S1SvImJ_G0010981.1 mouse_genomes_project 13 19497526 19499448 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036518.1 MGP_129S1SvImJ_G0020348.1 mouse_genomes_project 13 20968198 20968589 - MGP_129S1SvImJ_P0036518 Hist1h4f protein_coding protein_coding MGP_129S1SvImJ_T0003464.1 MGP_129S1SvImJ_G0003178.1 mouse_genomes_project 13 22405817 22417569 + 4932702P03Rik antisense antisense MGP_129S1SvImJ_T0003465.1 MGP_129S1SvImJ_G0003178.1 mouse_genomes_project 13 22405820 22408375 + 4932702P03Rik antisense antisense MGP_129S1SvImJ_T0037814.1 MGP_129S1SvImJ_G0020820.1 mouse_genomes_project 13 94078432 94123083 - MGP_129S1SvImJ_P0037814 Thbs4 protein_coding protein_coding MGP_129S1SvImJ_T0037815.1 MGP_129S1SvImJ_G0020820.1 mouse_genomes_project 13 94099963 94101779 - Thbs4 protein_coding retained_intron MGP_129S1SvImJ_T0012900.1 MGP_129S1SvImJ_G0010989.1 mouse_genomes_project 13 21374483 21374848 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011364.1 MGP_129S1SvImJ_G0009480.1 mouse_genomes_project 13 6278646 6278894 - Gm23496 misc_RNA misc_RNA MGP_129S1SvImJ_T0036276.1 MGP_129S1SvImJ_G0020224.1 mouse_genomes_project 13 5929480 6327021 + MGP_129S1SvImJ_P0036276 Dip2c protein_coding protein_coding MGP_129S1SvImJ_T0036277.1 MGP_129S1SvImJ_G0020224.1 mouse_genomes_project 13 5929885 6324274 + MGP_129S1SvImJ_P0036277 Dip2c protein_coding protein_coding MGP_129S1SvImJ_T0036278.1 MGP_129S1SvImJ_G0020224.1 mouse_genomes_project 13 5929934 6324274 + MGP_129S1SvImJ_P0036278 Dip2c protein_coding protein_coding MGP_129S1SvImJ_T0038259.1 MGP_129S1SvImJ_G0020973.1 mouse_genomes_project 13 122513083 122520868 + MGP_129S1SvImJ_P0038259 protein_coding protein_coding MGP_129S1SvImJ_T0038260.1 MGP_129S1SvImJ_G0020973.1 mouse_genomes_project 13 122513181 122520868 + MGP_129S1SvImJ_P0038260 protein_coding protein_coding MGP_129S1SvImJ_T0038261.1 MGP_129S1SvImJ_G0020973.1 mouse_genomes_project 13 122517933 122520926 + MGP_129S1SvImJ_P0038261 protein_coding protein_coding MGP_129S1SvImJ_T0006564.1 MGP_129S1SvImJ_G0005450.1 mouse_genomes_project 13 37325177 37332320 - Gm26514 lincRNA lincRNA MGP_129S1SvImJ_T0099365.1 MGP_129S1SvImJ_G0037432.1 mouse_genomes_project 13 44197454 44197561 - Gm23387 snRNA snRNA MGP_129S1SvImJ_T0036481.1 MGP_129S1SvImJ_G0020317.1 mouse_genomes_project 13 19660330 19661227 + MGP_129S1SvImJ_P0036481 Vmn1r197 protein_coding protein_coding MGP_129S1SvImJ_T0037986.1 MGP_129S1SvImJ_G0020883.1 mouse_genomes_project 13 102062976 102105871 - MGP_129S1SvImJ_P0037986 protein_coding protein_coding MGP_129S1SvImJ_T0006633.1 MGP_129S1SvImJ_G0005496.1 mouse_genomes_project 13 99352790 99371245 - 5330416C01Rik lincRNA lincRNA MGP_129S1SvImJ_T0006634.1 MGP_129S1SvImJ_G0005496.1 mouse_genomes_project 13 99354625 99366940 - 5330416C01Rik lincRNA lincRNA MGP_129S1SvImJ_T0006635.1 MGP_129S1SvImJ_G0005496.1 mouse_genomes_project 13 99368527 99371213 - 5330416C01Rik lincRNA lincRNA MGP_129S1SvImJ_T0102211.1 MGP_129S1SvImJ_G0040045.1 mouse_genomes_project 13 20669077 20670140 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0006567.1 MGP_129S1SvImJ_G0005453.1 mouse_genomes_project 13 40572478 40573423 + Gm28707 lincRNA lincRNA MGP_129S1SvImJ_T0006542.1 MGP_129S1SvImJ_G0005434.1 mouse_genomes_project 13 28480019 28490273 + 4930519D14Rik lincRNA lincRNA MGP_129S1SvImJ_T0036674.1 MGP_129S1SvImJ_G0020419.1 mouse_genomes_project 13 28869224 28870997 + MGP_129S1SvImJ_P0036674 Gm5447 protein_coding protein_coding MGP_129S1SvImJ_T0036699.1 MGP_129S1SvImJ_G0020433.1 mouse_genomes_project 13 31095475 31112163 + MGP_129S1SvImJ_P0036699 Serpinb1b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0006609.1 MGP_129S1SvImJ_G0005480.1 mouse_genomes_project 13 73018285 73019115 - Gm20554 lincRNA lincRNA MGP_129S1SvImJ_T0037371.1 MGP_129S1SvImJ_G0020664.1 mouse_genomes_project 13 61508976 61512335 + MGP_129S1SvImJ_P0037371 Gm5141 protein_coding protein_coding MGP_129S1SvImJ_T0099366.1 MGP_129S1SvImJ_G0037433.1 mouse_genomes_project 13 45697573 45697677 + Gm22960 snRNA snRNA MGP_129S1SvImJ_T0003463.1 MGP_129S1SvImJ_G0003177.1 mouse_genomes_project 13 22231920 22237209 + 1700016G14Rik antisense antisense MGP_129S1SvImJ_T0003451.1 MGP_129S1SvImJ_G0003166.1 mouse_genomes_project 13 7036415 7365517 + antisense antisense MGP_129S1SvImJ_T0037051.1 MGP_129S1SvImJ_G0020559.1 mouse_genomes_project 13 52270063 52283892 - MGP_129S1SvImJ_P0037051 Nfil3 protein_coding protein_coding MGP_129S1SvImJ_T0012926.1 MGP_129S1SvImJ_G0011015.1 mouse_genomes_project 13 32109903 32111269 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036860.1 MGP_129S1SvImJ_G0020498.1 mouse_genomes_project 13 41962947 41989852 + MGP_129S1SvImJ_P0036860 Sirt5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0037961.1 MGP_129S1SvImJ_G0020877.1 mouse_genomes_project 13 101713275 101716419 - MGP_129S1SvImJ_P0037961 Cartpt protein_coding protein_coding MGP_129S1SvImJ_T0037170.1 MGP_129S1SvImJ_G0020587.1 mouse_genomes_project 13 54605736 54621154 + MGP_129S1SvImJ_P0037170 Fgfr4 protein_coding protein_coding MGP_129S1SvImJ_T0037171.1 MGP_129S1SvImJ_G0020587.1 mouse_genomes_project 13 54608784 54609771 + Fgfr4 protein_coding processed_transcript MGP_129S1SvImJ_T0037172.1 MGP_129S1SvImJ_G0020587.1 mouse_genomes_project 13 54609232 54610020 + Fgfr4 protein_coding retained_intron MGP_129S1SvImJ_T0036691.1 MGP_129S1SvImJ_G0020429.1 mouse_genomes_project 13 30888858 30898950 - MGP_129S1SvImJ_P0036691 Serpinb1c protein_coding protein_coding MGP_129S1SvImJ_T0036692.1 MGP_129S1SvImJ_G0020429.1 mouse_genomes_project 13 30891032 30898927 - MGP_129S1SvImJ_P0036692 Serpinb1c protein_coding protein_coding MGP_129S1SvImJ_T0036361.1 MGP_129S1SvImJ_G0020250.1 mouse_genomes_project 13 14750878 14754571 + MGP_129S1SvImJ_P0036361 protein_coding protein_coding MGP_129S1SvImJ_T0098313.1 MGP_129S1SvImJ_G0036398.1 mouse_genomes_project 13 76182792 76184302 + pseudogene pseudogene MGP_129S1SvImJ_T0099350.1 MGP_129S1SvImJ_G0037417.1 mouse_genomes_project 13 18084294 18084418 + Gm25605 snRNA snRNA MGP_129S1SvImJ_T0038011.1 MGP_129S1SvImJ_G0020892.1 mouse_genomes_project 13 102627188 102665664 - MGP_129S1SvImJ_P0038011 Cdk7 protein_coding protein_coding MGP_129S1SvImJ_T0037268.1 MGP_129S1SvImJ_G0020625.1 mouse_genomes_project 13 57011216 57514511 - MGP_129S1SvImJ_P0037268 Spock1 protein_coding protein_coding MGP_129S1SvImJ_T0037269.1 MGP_129S1SvImJ_G0020625.1 mouse_genomes_project 13 57011228 57514472 - MGP_129S1SvImJ_P0037269 Spock1 protein_coding protein_coding MGP_129S1SvImJ_T0037270.1 MGP_129S1SvImJ_G0020625.1 mouse_genomes_project 13 57016115 57514472 - MGP_129S1SvImJ_P0037270 Spock1 protein_coding protein_coding MGP_129S1SvImJ_T0037271.1 MGP_129S1SvImJ_G0020625.1 mouse_genomes_project 13 57018726 57514488 - MGP_129S1SvImJ_P0037271 Spock1 protein_coding protein_coding MGP_129S1SvImJ_T0037272.1 MGP_129S1SvImJ_G0020625.1 mouse_genomes_project 13 57019311 57513784 - MGP_129S1SvImJ_P0037272 Spock1 protein_coding protein_coding MGP_129S1SvImJ_T0037273.1 MGP_129S1SvImJ_G0020625.1 mouse_genomes_project 13 57024427 57514496 - Spock1 protein_coding retained_intron MGP_129S1SvImJ_T0036465.1 MGP_129S1SvImJ_G0020305.1 mouse_genomes_project 13 19300759 19308236 + MGP_129S1SvImJ_P0036465 Pom121l2 protein_coding protein_coding MGP_129S1SvImJ_T0036466.1 MGP_129S1SvImJ_G0020305.1 mouse_genomes_project 13 19301085 19304045 + MGP_129S1SvImJ_P0036466 Pom121l2 protein_coding protein_coding MGP_129S1SvImJ_T0036520.1 MGP_129S1SvImJ_G0020350.1 mouse_genomes_project 13 20993938 20994503 - MGP_129S1SvImJ_P0036520 Hist1h2bf protein_coding protein_coding MGP_129S1SvImJ_T0036834.1 MGP_129S1SvImJ_G0020491.1 mouse_genomes_project 13 40157771 40158599 + MGP_129S1SvImJ_P0036834 Gm5082 protein_coding protein_coding MGP_129S1SvImJ_T0000906.1 MGP_129S1SvImJ_G0000838.1 mouse_genomes_project 13 51275558 51277722 - TEC TEC MGP_129S1SvImJ_T0037987.1 MGP_129S1SvImJ_G0020884.1 mouse_genomes_project 13 102142442 102196207 - MGP_129S1SvImJ_P0037987 Naip6 protein_coding protein_coding MGP_129S1SvImJ_T0100646.1 MGP_129S1SvImJ_G0038713.1 mouse_genomes_project 13 76508115 76508246 - Gm23319 snoRNA snoRNA MGP_129S1SvImJ_T0017379.1 MGP_129S1SvImJ_G0015252.1 mouse_genomes_project 13 22442137 22446154 + 9330162012Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0012904.1 MGP_129S1SvImJ_G0010993.1 mouse_genomes_project 13 21877707 21878042 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009978.1 MGP_129S1SvImJ_G0008094.1 mouse_genomes_project 13 100279200 100279302 + Gm22698 miRNA miRNA MGP_129S1SvImJ_T0009959.1 MGP_129S1SvImJ_G0008075.1 mouse_genomes_project 13 60042793 60042894 + Gm24999 miRNA miRNA MGP_129S1SvImJ_T0037946.1 MGP_129S1SvImJ_G0020868.1 mouse_genomes_project 13 100368453 100370886 - MGP_129S1SvImJ_P0037946 Tmem174 protein_coding protein_coding MGP_129S1SvImJ_T0037121.1 MGP_129S1SvImJ_G0020580.1 mouse_genomes_project 13 54207247 54210625 + MGP_129S1SvImJ_P0037121 Eif4e1b protein_coding protein_coding MGP_129S1SvImJ_T0037122.1 MGP_129S1SvImJ_G0020580.1 mouse_genomes_project 13 54207250 54209903 + MGP_129S1SvImJ_P0037122 Eif4e1b protein_coding protein_coding MGP_129S1SvImJ_T0037123.1 MGP_129S1SvImJ_G0020580.1 mouse_genomes_project 13 54207250 54210625 + MGP_129S1SvImJ_P0037123 Eif4e1b protein_coding protein_coding MGP_129S1SvImJ_T0037124.1 MGP_129S1SvImJ_G0020580.1 mouse_genomes_project 13 54207250 54210719 + MGP_129S1SvImJ_P0037124 Eif4e1b protein_coding protein_coding MGP_129S1SvImJ_T0037125.1 MGP_129S1SvImJ_G0020580.1 mouse_genomes_project 13 54207250 54210113 + MGP_129S1SvImJ_P0037125 Eif4e1b protein_coding protein_coding MGP_129S1SvImJ_T0037126.1 MGP_129S1SvImJ_G0020580.1 mouse_genomes_project 13 54207252 54210634 + MGP_129S1SvImJ_P0037126 Eif4e1b protein_coding protein_coding MGP_129S1SvImJ_T0037127.1 MGP_129S1SvImJ_G0020580.1 mouse_genomes_project 13 54207252 54210626 + MGP_129S1SvImJ_P0037127 Eif4e1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037128.1 MGP_129S1SvImJ_G0020580.1 mouse_genomes_project 13 54207252 54213541 + MGP_129S1SvImJ_P0037128 Eif4e1b protein_coding protein_coding MGP_129S1SvImJ_T0037129.1 MGP_129S1SvImJ_G0020580.1 mouse_genomes_project 13 54207262 54213533 + MGP_129S1SvImJ_P0037129 Eif4e1b protein_coding protein_coding MGP_129S1SvImJ_T0037130.1 MGP_129S1SvImJ_G0020580.1 mouse_genomes_project 13 54207269 54210726 + MGP_129S1SvImJ_P0037130 Eif4e1b protein_coding protein_coding MGP_129S1SvImJ_T0011379.1 MGP_129S1SvImJ_G0009495.1 mouse_genomes_project 13 93031855 93032155 - Gm24597 misc_RNA misc_RNA MGP_129S1SvImJ_T0036536.1 MGP_129S1SvImJ_G0020362.1 mouse_genomes_project 13 21194014 21195571 + MGP_129S1SvImJ_P0036536 Hist1h2ab protein_coding protein_coding MGP_129S1SvImJ_T0006568.1 MGP_129S1SvImJ_G0005454.1 mouse_genomes_project 13 42759589 42763574 + Gm5083 lincRNA lincRNA MGP_129S1SvImJ_T0006569.1 MGP_129S1SvImJ_G0005454.1 mouse_genomes_project 13 42759716 42763574 + Gm5083 lincRNA lincRNA MGP_129S1SvImJ_T0036755.1 MGP_129S1SvImJ_G0020456.1 mouse_genomes_project 13 33089667 33109492 - MGP_129S1SvImJ_P0036755 Eci3 protein_coding protein_coding MGP_129S1SvImJ_T0036756.1 MGP_129S1SvImJ_G0020456.1 mouse_genomes_project 13 33091137 33109470 - MGP_129S1SvImJ_P0036756 Eci3 protein_coding protein_coding MGP_129S1SvImJ_T0036605.1 MGP_129S1SvImJ_G0020386.1 mouse_genomes_project 13 22498113 22517683 - MGP_129S1SvImJ_P0036605 Mrs2 protein_coding protein_coding MGP_129S1SvImJ_T0003471.1 MGP_129S1SvImJ_G0003182.1 mouse_genomes_project 13 39189616 39198236 + Gm26688 antisense antisense MGP_129S1SvImJ_T0037302.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59152735 59153427 - Agtpbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0037303.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59152736 59266695 - MGP_129S1SvImJ_P0037303 Agtpbp1 protein_coding protein_coding MGP_129S1SvImJ_T0037304.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59152738 59240559 - MGP_129S1SvImJ_P0037304 Agtpbp1 protein_coding protein_coding MGP_129S1SvImJ_T0037305.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59153078 59265542 - MGP_129S1SvImJ_P0037305 Agtpbp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037306.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59153078 59266692 - MGP_129S1SvImJ_P0037306 Agtpbp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037307.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59158461 59253059 - MGP_129S1SvImJ_P0037307 Agtpbp1 protein_coding protein_coding MGP_129S1SvImJ_T0037308.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59178299 59185784 - Agtpbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0037309.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59185026 59266701 - MGP_129S1SvImJ_P0037309 Agtpbp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037310.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59200886 59266692 - MGP_129S1SvImJ_P0037310 Agtpbp1 protein_coding protein_coding MGP_129S1SvImJ_T0037311.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59200896 59266700 - MGP_129S1SvImJ_P0037311 Agtpbp1 protein_coding protein_coding MGP_129S1SvImJ_T0037312.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59218784 59221945 - Agtpbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0037313.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59219810 59266717 - MGP_129S1SvImJ_P0037313 Agtpbp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037314.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59221956 59241441 - Agtpbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0037315.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59225472 59266695 - MGP_129S1SvImJ_P0037315 Agtpbp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037316.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59235839 59266685 - MGP_129S1SvImJ_P0037316 Agtpbp1 protein_coding protein_coding MGP_129S1SvImJ_T0037317.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59238550 59266753 - MGP_129S1SvImJ_P0037317 Agtpbp1 protein_coding protein_coding MGP_129S1SvImJ_T0037318.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59239273 59266706 - MGP_129S1SvImJ_P0037318 Agtpbp1 protein_coding protein_coding MGP_129S1SvImJ_T0037319.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59239273 59268148 - MGP_129S1SvImJ_P0037319 Agtpbp1 protein_coding protein_coding MGP_129S1SvImJ_T0037320.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59239281 59265539 - MGP_129S1SvImJ_P0037320 Agtpbp1 protein_coding protein_coding MGP_129S1SvImJ_T0037321.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59239411 59294250 - MGP_129S1SvImJ_P0037321 Agtpbp1 protein_coding protein_coding MGP_129S1SvImJ_T0037322.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59243619 59265657 - MGP_129S1SvImJ_P0037322 Agtpbp1 protein_coding protein_coding MGP_129S1SvImJ_T0037323.1 MGP_129S1SvImJ_G0020637.1 mouse_genomes_project 13 59289239 59294266 - Agtpbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0037502.1 MGP_129S1SvImJ_G0020716.1 mouse_genomes_project 13 67693795 67709221 - MGP_129S1SvImJ_P0037502 Zfp748 protein_coding protein_coding MGP_129S1SvImJ_T0037503.1 MGP_129S1SvImJ_G0020716.1 mouse_genomes_project 13 67700983 67709221 - MGP_129S1SvImJ_P0037503 Zfp748 protein_coding protein_coding MGP_129S1SvImJ_T0036673.1 MGP_129S1SvImJ_G0020418.1 mouse_genomes_project 13 28836510 28837697 - MGP_129S1SvImJ_P0036673 Hus1b protein_coding protein_coding MGP_129S1SvImJ_T0012895.1 MGP_129S1SvImJ_G0010984.1 mouse_genomes_project 13 20028391 20029701 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009939.1 MGP_129S1SvImJ_G0008055.1 mouse_genomes_project 13 21188311 21189210 + miRNA miRNA MGP_129S1SvImJ_T0037682.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84347094 84517403 + MGP_129S1SvImJ_P0037682 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037683.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84347266 84517746 + MGP_129S1SvImJ_P0037683 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037684.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84347300 84521139 + MGP_129S1SvImJ_P0037684 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037685.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84347300 84445319 + MGP_129S1SvImJ_P0037685 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037686.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84347300 84445253 + MGP_129S1SvImJ_P0037686 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037687.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84347300 84521139 + MGP_129S1SvImJ_P0037687 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037688.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84372258 84478664 + MGP_129S1SvImJ_P0037688 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037689.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84373523 84486341 + MGP_129S1SvImJ_P0037689 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037690.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84374030 84378855 + Mef2c protein_coding retained_intron MGP_129S1SvImJ_T0037691.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84374087 84518520 + MGP_129S1SvImJ_P0037691 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037692.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84374088 84478806 + MGP_129S1SvImJ_P0037692 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037693.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84374094 84517753 + MGP_129S1SvImJ_P0037693 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037694.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84374124 84506468 + MGP_129S1SvImJ_P0037694 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037695.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84374153 84487091 + Mef2c protein_coding retained_intron MGP_129S1SvImJ_T0037696.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84379643 84478655 + MGP_129S1SvImJ_P0037696 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037697.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84423441 84488641 + MGP_129S1SvImJ_P0037697 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037698.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84423474 84478843 + MGP_129S1SvImJ_P0037698 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037699.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84424700 84521141 + MGP_129S1SvImJ_P0037699 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037700.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84424711 84429505 + Mef2c protein_coding retained_intron MGP_129S1SvImJ_T0037701.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84424715 84518534 + MGP_129S1SvImJ_P0037701 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037702.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84424718 84486442 + MGP_129S1SvImJ_P0037702 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037703.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84426238 84506421 + MGP_129S1SvImJ_P0037703 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037704.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84426303 84486367 + MGP_129S1SvImJ_P0037704 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037705.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84426770 84516694 + MGP_129S1SvImJ_P0037705 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037706.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84426770 84516694 + MGP_129S1SvImJ_P0037706 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037707.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84426770 84521141 + MGP_129S1SvImJ_P0037707 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037708.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84478873 84516798 + MGP_129S1SvImJ_P0037708 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0037709.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84486266 84509081 + MGP_129S1SvImJ_P0037709 Mef2c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037710.1 MGP_129S1SvImJ_G0020791.1 mouse_genomes_project 13 84506445 84516801 + MGP_129S1SvImJ_P0037710 Mef2c protein_coding protein_coding MGP_129S1SvImJ_T0012955.1 MGP_129S1SvImJ_G0011044.1 mouse_genomes_project 13 78950246 78952455 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036324.1 MGP_129S1SvImJ_G0020239.1 mouse_genomes_project 13 10934738 10936112 - MGP_129S1SvImJ_P0036324 Gm18856 protein_coding protein_coding MGP_129S1SvImJ_T0006571.1 MGP_129S1SvImJ_G0005456.1 mouse_genomes_project 13 43084381 43103769 + 1700029N11Rik lincRNA lincRNA MGP_129S1SvImJ_T0006572.1 MGP_129S1SvImJ_G0005456.1 mouse_genomes_project 13 43084396 43103772 + 1700029N11Rik lincRNA lincRNA MGP_129S1SvImJ_T0003490.1 MGP_129S1SvImJ_G0003194.1 mouse_genomes_project 13 67176049 67920737 + antisense antisense MGP_129S1SvImJ_T0003492.1 MGP_129S1SvImJ_G0003194.1 mouse_genomes_project 13 67896812 67922648 + antisense antisense MGP_129S1SvImJ_T0003493.1 MGP_129S1SvImJ_G0003194.1 mouse_genomes_project 13 67911498 67923772 + antisense antisense MGP_129S1SvImJ_T0012954.1 MGP_129S1SvImJ_G0011043.1 mouse_genomes_project 13 77502071 77502740 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036399.1 MGP_129S1SvImJ_G0020267.1 mouse_genomes_project 13 18356677 18357258 + MGP_129S1SvImJ_P0036399 protein_coding protein_coding MGP_129S1SvImJ_T0036706.1 MGP_129S1SvImJ_G0020438.1 mouse_genomes_project 13 31297705 31405650 + MGP_129S1SvImJ_P0036706 Serpinb9g protein_coding protein_coding MGP_129S1SvImJ_T0012974.1 MGP_129S1SvImJ_G0011063.1 mouse_genomes_project 13 113847330 113847803 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036687.1 MGP_129S1SvImJ_G0020426.1 mouse_genomes_project 13 30805483 30826481 + MGP_129S1SvImJ_P0036687 Wrnip1 protein_coding protein_coding MGP_129S1SvImJ_T0006527.1 MGP_129S1SvImJ_G0005424.1 mouse_genomes_project 13 20833669 20836717 - C230035I16Rik lincRNA lincRNA MGP_129S1SvImJ_T0006528.1 MGP_129S1SvImJ_G0005424.1 mouse_genomes_project 13 20833801 20836521 - C230035I16Rik lincRNA lincRNA MGP_129S1SvImJ_T0038202.1 MGP_129S1SvImJ_G0020946.1 mouse_genomes_project 13 115646425 115649368 - MGP_129S1SvImJ_P0038202 Gm10735 protein_coding protein_coding MGP_129S1SvImJ_T0012918.1 MGP_129S1SvImJ_G0011007.1 mouse_genomes_project 13 28037635 28038064 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009962.1 MGP_129S1SvImJ_G0008078.1 mouse_genomes_project 13 63260804 63260877 + Mir27b miRNA miRNA MGP_129S1SvImJ_T0012952.1 MGP_129S1SvImJ_G0011041.1 mouse_genomes_project 13 77241361 77241781 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038235.1 MGP_129S1SvImJ_G0020962.1 mouse_genomes_project 13 119763330 119939766 - MGP_129S1SvImJ_P0038235 Parp8 protein_coding protein_coding MGP_129S1SvImJ_T0000919.1 MGP_129S1SvImJ_G0000851.1 mouse_genomes_project 13 100232600 100233175 - TEC TEC MGP_129S1SvImJ_T0036863.1 MGP_129S1SvImJ_G0020501.1 mouse_genomes_project 13 42139312 42159195 - MGP_129S1SvImJ_P0036863 Mcur1 protein_coding protein_coding MGP_129S1SvImJ_T0006630.1 MGP_129S1SvImJ_G0005495.1 mouse_genomes_project 13 99056550 99125264 + Lncenc1 lincRNA lincRNA MGP_129S1SvImJ_T0006631.1 MGP_129S1SvImJ_G0005495.1 mouse_genomes_project 13 99110282 99125264 + Lncenc1 lincRNA lincRNA MGP_129S1SvImJ_T0006632.1 MGP_129S1SvImJ_G0005495.1 mouse_genomes_project 13 99110536 99117285 + Lncenc1 lincRNA lincRNA MGP_129S1SvImJ_T0037714.1 MGP_129S1SvImJ_G0020795.1 mouse_genomes_project 13 86112657 86141046 + MGP_129S1SvImJ_P0037714 Ccnh protein_coding protein_coding MGP_129S1SvImJ_T0037715.1 MGP_129S1SvImJ_G0020795.1 mouse_genomes_project 13 86112684 86125519 + MGP_129S1SvImJ_P0037715 Ccnh protein_coding protein_coding MGP_129S1SvImJ_T0037716.1 MGP_129S1SvImJ_G0020795.1 mouse_genomes_project 13 86112697 86139934 + MGP_129S1SvImJ_P0037716 Ccnh protein_coding protein_coding MGP_129S1SvImJ_T0037717.1 MGP_129S1SvImJ_G0020795.1 mouse_genomes_project 13 86112726 86140233 + MGP_129S1SvImJ_P0037717 Ccnh protein_coding protein_coding MGP_129S1SvImJ_T0037718.1 MGP_129S1SvImJ_G0020795.1 mouse_genomes_project 13 86125506 86150794 + MGP_129S1SvImJ_P0037718 Ccnh protein_coding protein_coding MGP_129S1SvImJ_T0037719.1 MGP_129S1SvImJ_G0020795.1 mouse_genomes_project 13 86138644 86140432 + Ccnh protein_coding processed_transcript MGP_129S1SvImJ_T0037720.1 MGP_129S1SvImJ_G0020795.1 mouse_genomes_project 13 86139106 86140228 + Ccnh protein_coding retained_intron MGP_129S1SvImJ_T0100617.1 MGP_129S1SvImJ_G0038684.1 mouse_genomes_project 13 1690908 1691040 - Gm24790 snoRNA snoRNA MGP_129S1SvImJ_T0000914.1 MGP_129S1SvImJ_G0000846.1 mouse_genomes_project 13 91366718 91367537 + TEC TEC MGP_129S1SvImJ_T0037680.1 MGP_129S1SvImJ_G0020789.1 mouse_genomes_project 13 82480583 82518999 + MGP_129S1SvImJ_P0037680 Mblac2 protein_coding protein_coding MGP_129S1SvImJ_T0036392.1 MGP_129S1SvImJ_G0020263.1 mouse_genomes_project 13 16941367 17021395 - MGP_129S1SvImJ_P0036392 Gpr141 protein_coding protein_coding MGP_129S1SvImJ_T0036708.1 MGP_129S1SvImJ_G0020440.1 mouse_genomes_project 13 31789568 31804672 + MGP_129S1SvImJ_P0036708 Serpinb6d protein_coding protein_coding MGP_129S1SvImJ_T0102215.1 MGP_129S1SvImJ_G0040049.1 mouse_genomes_project 13 24949558 24952604 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0006545.1 MGP_129S1SvImJ_G0005437.1 mouse_genomes_project 13 29243885 29245061 - Gm11373 lincRNA lincRNA MGP_129S1SvImJ_T0036434.1 MGP_129S1SvImJ_G0020284.1 mouse_genomes_project 13 18825709 18826653 - MGP_129S1SvImJ_P0036434 Olfr1535 protein_coding protein_coding MGP_129S1SvImJ_T0037116.1 MGP_129S1SvImJ_G0020578.1 mouse_genomes_project 13 54149831 54174716 - MGP_129S1SvImJ_P0037116 Gprin1 protein_coding protein_coding MGP_129S1SvImJ_T0038024.1 MGP_129S1SvImJ_G0020896.1 mouse_genomes_project 13 102741063 102777195 - MGP_129S1SvImJ_P0038024 Slc30a5 protein_coding protein_coding MGP_129S1SvImJ_T0038230.1 MGP_129S1SvImJ_G0020961.1 mouse_genomes_project 13 119182027 119198188 - MGP_129S1SvImJ_P0038230 Isl1 protein_coding protein_coding MGP_129S1SvImJ_T0038231.1 MGP_129S1SvImJ_G0020961.1 mouse_genomes_project 13 119183010 119197921 - MGP_129S1SvImJ_P0038231 Isl1 protein_coding protein_coding MGP_129S1SvImJ_T0038232.1 MGP_129S1SvImJ_G0020961.1 mouse_genomes_project 13 119183142 119187066 - Isl1 protein_coding retained_intron MGP_129S1SvImJ_T0038233.1 MGP_129S1SvImJ_G0020961.1 mouse_genomes_project 13 119186760 119194901 - Isl1 protein_coding processed_transcript MGP_129S1SvImJ_T0038234.1 MGP_129S1SvImJ_G0020961.1 mouse_genomes_project 13 119195408 119198184 - Isl1 protein_coding retained_intron MGP_129S1SvImJ_T0009933.1 MGP_129S1SvImJ_G0008049.1 mouse_genomes_project 13 19034832 19034970 + Gm44454 miRNA miRNA MGP_129S1SvImJ_T0037228.1 MGP_129S1SvImJ_G0020610.1 mouse_genomes_project 13 55231911 55285449 + MGP_129S1SvImJ_P0037228 Pcbd2 protein_coding protein_coding MGP_129S1SvImJ_T0037229.1 MGP_129S1SvImJ_G0020610.1 mouse_genomes_project 13 55231911 55285447 + MGP_129S1SvImJ_P0037229 Pcbd2 protein_coding protein_coding MGP_129S1SvImJ_T0036195.1 MGP_129S1SvImJ_G0020198.1 mouse_genomes_project 13 331305 340653 + MGP_129S1SvImJ_P0036195 Calm5 protein_coding protein_coding MGP_129S1SvImJ_T0036196.1 MGP_129S1SvImJ_G0020198.1 mouse_genomes_project 13 337259 340662 + MGP_129S1SvImJ_P0036196 Calm5 protein_coding protein_coding MGP_129S1SvImJ_T0036736.1 MGP_129S1SvImJ_G0020446.1 mouse_genomes_project 13 32142268 32180413 + MGP_129S1SvImJ_P0036736 Bphl protein_coding protein_coding MGP_129S1SvImJ_T0037060.1 MGP_129S1SvImJ_G0020565.1 mouse_genomes_project 13 53446614 53485413 + MGP_129S1SvImJ_P0037060 Sfxn1 protein_coding protein_coding MGP_129S1SvImJ_T0037007.1 MGP_129S1SvImJ_G0020550.1 mouse_genomes_project 13 50627532 50780221 - MGP_129S1SvImJ_P0037007 Shc3 protein_coding protein_coding MGP_129S1SvImJ_T0012919.1 MGP_129S1SvImJ_G0011008.1 mouse_genomes_project 13 28254652 28254970 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009930.1 MGP_129S1SvImJ_G0008046.1 mouse_genomes_project 13 18657668 18657729 - Mir6942 miRNA miRNA MGP_129S1SvImJ_T0098826.1 MGP_129S1SvImJ_G0036907.1 mouse_genomes_project 13 63338704 63342350 - Gm16132 sense_intronic sense_intronic MGP_129S1SvImJ_T0037016.1 MGP_129S1SvImJ_G0020553.1 mouse_genomes_project 13 50912715 50928193 - MGP_129S1SvImJ_P0037016 Gm15440 protein_coding protein_coding MGP_129S1SvImJ_T0036793.1 MGP_129S1SvImJ_G0020470.1 mouse_genomes_project 13 36475387 36526761 + MGP_129S1SvImJ_P0036793 Dsp protein_coding protein_coding MGP_129S1SvImJ_T0036794.1 MGP_129S1SvImJ_G0020470.1 mouse_genomes_project 13 36475407 36526761 + MGP_129S1SvImJ_P0036794 Dsp protein_coding protein_coding MGP_129S1SvImJ_T0036795.1 MGP_129S1SvImJ_G0020470.1 mouse_genomes_project 13 36505609 36509476 + Dsp protein_coding processed_transcript MGP_129S1SvImJ_T0036750.1 MGP_129S1SvImJ_G0020452.1 mouse_genomes_project 13 32862784 32878695 + MGP_129S1SvImJ_P0036750 Fam50b protein_coding protein_coding MGP_129S1SvImJ_T0102193.1 MGP_129S1SvImJ_G0040027.1 mouse_genomes_project 13 19777834 19778605 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002615.1 MGP_129S1SvImJ_G0002514.1 mouse_genomes_project 13 16375914 16376371 + MGP_129S1SvImJ_P0002615 Tcrg-V3 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002616.1 MGP_129S1SvImJ_G0002514.1 mouse_genomes_project 13 16375914 16376371 + MGP_129S1SvImJ_P0002616 Tcrg-V3 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0036378.1 MGP_129S1SvImJ_G0020258.1 mouse_genomes_project 13 16518010 16528103 - Stard3nl protein_coding retained_intron MGP_129S1SvImJ_T0036379.1 MGP_129S1SvImJ_G0020258.1 mouse_genomes_project 13 16518013 16519463 - Stard3nl protein_coding retained_intron MGP_129S1SvImJ_T0036380.1 MGP_129S1SvImJ_G0020258.1 mouse_genomes_project 13 16518013 16557168 - MGP_129S1SvImJ_P0036380 Stard3nl protein_coding protein_coding MGP_129S1SvImJ_T0036381.1 MGP_129S1SvImJ_G0020258.1 mouse_genomes_project 13 16518338 16530508 - Stard3nl protein_coding retained_intron MGP_129S1SvImJ_T0036382.1 MGP_129S1SvImJ_G0020258.1 mouse_genomes_project 13 16525102 16557155 - MGP_129S1SvImJ_P0036382 Stard3nl protein_coding protein_coding MGP_129S1SvImJ_T0036383.1 MGP_129S1SvImJ_G0020258.1 mouse_genomes_project 13 16529546 16557216 - Stard3nl protein_coding retained_intron MGP_129S1SvImJ_T0036384.1 MGP_129S1SvImJ_G0020258.1 mouse_genomes_project 13 16530463 16536817 - Stard3nl protein_coding retained_intron MGP_129S1SvImJ_T0036385.1 MGP_129S1SvImJ_G0020258.1 mouse_genomes_project 13 16536743 16557180 - MGP_129S1SvImJ_P0036385 Stard3nl protein_coding protein_coding MGP_129S1SvImJ_T0037760.1 MGP_129S1SvImJ_G0020804.1 mouse_genomes_project 13 92102837 92126445 - MGP_129S1SvImJ_P0037760 Atp6ap1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037761.1 MGP_129S1SvImJ_G0020804.1 mouse_genomes_project 13 92102949 92126430 - MGP_129S1SvImJ_P0037761 Atp6ap1l protein_coding protein_coding MGP_129S1SvImJ_T0037762.1 MGP_129S1SvImJ_G0020804.1 mouse_genomes_project 13 92118114 92126473 - Atp6ap1l protein_coding processed_transcript MGP_129S1SvImJ_T0036953.1 MGP_129S1SvImJ_G0020530.1 mouse_genomes_project 13 48152305 48161065 + MGP_129S1SvImJ_P0036953 Ninj1 protein_coding protein_coding MGP_129S1SvImJ_T0036954.1 MGP_129S1SvImJ_G0020530.1 mouse_genomes_project 13 48152345 48161065 + MGP_129S1SvImJ_P0036954 Ninj1 protein_coding protein_coding MGP_129S1SvImJ_T0036955.1 MGP_129S1SvImJ_G0020530.1 mouse_genomes_project 13 48152356 48160580 + MGP_129S1SvImJ_P0036955 Ninj1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036956.1 MGP_129S1SvImJ_G0020530.1 mouse_genomes_project 13 48152587 48159745 + Ninj1 protein_coding processed_transcript MGP_129S1SvImJ_T0036957.1 MGP_129S1SvImJ_G0020530.1 mouse_genomes_project 13 48155116 48161065 + Ninj1 protein_coding processed_transcript MGP_129S1SvImJ_T0038214.1 MGP_129S1SvImJ_G0020954.1 mouse_genomes_project 13 116459412 116845044 + MGP_129S1SvImJ_P0038214 Arl15 protein_coding protein_coding MGP_129S1SvImJ_T0037085.1 MGP_129S1SvImJ_G0020572.1 mouse_genomes_project 13 53988560 53996374 - MGP_129S1SvImJ_P0037085 Nop16 protein_coding protein_coding MGP_129S1SvImJ_T0037086.1 MGP_129S1SvImJ_G0020572.1 mouse_genomes_project 13 53988911 53996342 - MGP_129S1SvImJ_P0037086 Nop16 protein_coding protein_coding MGP_129S1SvImJ_T0037087.1 MGP_129S1SvImJ_G0020572.1 mouse_genomes_project 13 53989614 53996260 - MGP_129S1SvImJ_P0037087 Nop16 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0009936.1 MGP_129S1SvImJ_G0008052.1 mouse_genomes_project 13 19235258 19235347 - Gm44456 miRNA miRNA MGP_129S1SvImJ_T0036773.1 MGP_129S1SvImJ_G0020464.1 mouse_genomes_project 13 35104990 35296577 - MGP_129S1SvImJ_P0036773 F13a1 protein_coding protein_coding MGP_129S1SvImJ_T0036774.1 MGP_129S1SvImJ_G0020464.1 mouse_genomes_project 13 35104990 35297554 - MGP_129S1SvImJ_P0036774 F13a1 protein_coding protein_coding MGP_129S1SvImJ_T0003534.1 MGP_129S1SvImJ_G0003218.1 mouse_genomes_project 13 121693594 121714382 - Gm16263 antisense antisense MGP_129S1SvImJ_T0012960.1 MGP_129S1SvImJ_G0011049.1 mouse_genomes_project 13 88807382 88808388 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0037914.1 MGP_129S1SvImJ_G0020858.1 mouse_genomes_project 13 98734545 98753835 + MGP_129S1SvImJ_P0037914 Gfm2 protein_coding protein_coding MGP_129S1SvImJ_T0037915.1 MGP_129S1SvImJ_G0020858.1 mouse_genomes_project 13 98734545 98776738 + MGP_129S1SvImJ_P0037915 Gfm2 protein_coding protein_coding MGP_129S1SvImJ_T0037916.1 MGP_129S1SvImJ_G0020858.1 mouse_genomes_project 13 98734585 98774930 + Gfm2 protein_coding retained_intron MGP_129S1SvImJ_T0037917.1 MGP_129S1SvImJ_G0020858.1 mouse_genomes_project 13 98734586 98776748 + MGP_129S1SvImJ_P0037917 Gfm2 protein_coding protein_coding MGP_129S1SvImJ_T0037918.1 MGP_129S1SvImJ_G0020858.1 mouse_genomes_project 13 98734593 98768573 + MGP_129S1SvImJ_P0037918 Gfm2 protein_coding protein_coding MGP_129S1SvImJ_T0037919.1 MGP_129S1SvImJ_G0020858.1 mouse_genomes_project 13 98734606 98741969 + Gfm2 protein_coding retained_intron MGP_129S1SvImJ_T0037920.1 MGP_129S1SvImJ_G0020858.1 mouse_genomes_project 13 98734610 98781492 + MGP_129S1SvImJ_P0037920 Gfm2 protein_coding protein_coding MGP_129S1SvImJ_T0037921.1 MGP_129S1SvImJ_G0020858.1 mouse_genomes_project 13 98734616 98744654 + MGP_129S1SvImJ_P0037921 Gfm2 protein_coding protein_coding MGP_129S1SvImJ_T0037922.1 MGP_129S1SvImJ_G0020858.1 mouse_genomes_project 13 98734648 98776748 + MGP_129S1SvImJ_P0037922 Gfm2 protein_coding protein_coding MGP_129S1SvImJ_T0037923.1 MGP_129S1SvImJ_G0020858.1 mouse_genomes_project 13 98748706 98761385 + MGP_129S1SvImJ_P0037923 Gfm2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037924.1 MGP_129S1SvImJ_G0020858.1 mouse_genomes_project 13 98758420 98776748 + Gfm2 protein_coding retained_intron MGP_129S1SvImJ_T0037925.1 MGP_129S1SvImJ_G0020858.1 mouse_genomes_project 13 98771745 98777783 + Gfm2 protein_coding retained_intron MGP_129S1SvImJ_T0006645.1 MGP_129S1SvImJ_G0005506.1 mouse_genomes_project 13 109939927 109944702 + 1700006H21Rik lincRNA lincRNA MGP_129S1SvImJ_T0006646.1 MGP_129S1SvImJ_G0005506.1 mouse_genomes_project 13 109939927 109944691 + 1700006H21Rik lincRNA lincRNA MGP_129S1SvImJ_T0037276.1 MGP_129S1SvImJ_G0020627.1 mouse_genomes_project 13 57757123 57759809 - MGP_129S1SvImJ_P0037276 Hnrnpa0 protein_coding protein_coding MGP_129S1SvImJ_T0037058.1 MGP_129S1SvImJ_G0020563.1 mouse_genomes_project 13 52874612 52874969 + MGP_129S1SvImJ_P0037058 Gm5449 protein_coding protein_coding MGP_129S1SvImJ_T0036425.1 MGP_129S1SvImJ_G0020278.1 mouse_genomes_project 13 18743905 18751790 + MGP_129S1SvImJ_P0036425 protein_coding protein_coding MGP_129S1SvImJ_T0036189.1 MGP_129S1SvImJ_G0020195.1 mouse_genomes_project 13 114326 145313 + MGP_129S1SvImJ_P0036189 Asb13 protein_coding protein_coding MGP_129S1SvImJ_T0036190.1 MGP_129S1SvImJ_G0020195.1 mouse_genomes_project 13 114383 115077 + Asb13 protein_coding processed_transcript MGP_129S1SvImJ_T0036191.1 MGP_129S1SvImJ_G0020195.1 mouse_genomes_project 13 114392 142539 + Asb13 protein_coding processed_transcript MGP_129S1SvImJ_T0036192.1 MGP_129S1SvImJ_G0020195.1 mouse_genomes_project 13 114393 125974 + Asb13 protein_coding retained_intron MGP_129S1SvImJ_T0009945.1 MGP_129S1SvImJ_G0008061.1 mouse_genomes_project 13 39331672 39331744 + Mir5124a miRNA miRNA MGP_129S1SvImJ_T0037484.1 MGP_129S1SvImJ_G0020707.1 mouse_genomes_project 13 67460195 67506041 - MGP_129S1SvImJ_P0037484 Gm28044 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037485.1 MGP_129S1SvImJ_G0020707.1 mouse_genomes_project 13 67463707 67493550 - Gm28044 protein_coding processed_transcript MGP_129S1SvImJ_T0037009.1 MGP_129S1SvImJ_G0020552.1 mouse_genomes_project 13 50874756 50911231 + MGP_129S1SvImJ_P0037009 Secisbp2 protein_coding protein_coding MGP_129S1SvImJ_T0037010.1 MGP_129S1SvImJ_G0020552.1 mouse_genomes_project 13 50874800 50889794 + MGP_129S1SvImJ_P0037010 Secisbp2 protein_coding protein_coding MGP_129S1SvImJ_T0037011.1 MGP_129S1SvImJ_G0020552.1 mouse_genomes_project 13 50874844 50910568 + MGP_129S1SvImJ_P0037011 Secisbp2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0037012.1 MGP_129S1SvImJ_G0020552.1 mouse_genomes_project 13 50874856 50880750 + Secisbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0037013.1 MGP_129S1SvImJ_G0020552.1 mouse_genomes_project 13 50874856 50888883 + Secisbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0037014.1 MGP_129S1SvImJ_G0020552.1 mouse_genomes_project 13 50905231 50909716 + Secisbp2 protein_coding retained_intron MGP_129S1SvImJ_T0037015.1 MGP_129S1SvImJ_G0020552.1 mouse_genomes_project 13 50907271 50910676 + Secisbp2 protein_coding retained_intron MGP_129S1SvImJ_T0036829.1 MGP_129S1SvImJ_G0020487.1 mouse_genomes_project 13 39736050 39764192 + MGP_129S1SvImJ_P0036829 Smim13 protein_coding protein_coding MGP_129S1SvImJ_T0038269.1 MGP_129S1SvImJ_G0020979.1 mouse_genomes_project 13 122778972 122779752 - MGP_129S1SvImJ_P0038269 protein_coding protein_coding MGP_129S1SvImJ_T0036974.1 MGP_129S1SvImJ_G0020538.1 mouse_genomes_project 13 48521834 48547154 + MGP_129S1SvImJ_P0036974 Aspn protein_coding protein_coding MGP_129S1SvImJ_T0036975.1 MGP_129S1SvImJ_G0020538.1 mouse_genomes_project 13 48521834 48547154 + MGP_129S1SvImJ_P0036975 Aspn protein_coding protein_coding MGP_129S1SvImJ_T0012966.1 MGP_129S1SvImJ_G0011055.1 mouse_genomes_project 13 94625074 94625940 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0037730.1 MGP_129S1SvImJ_G0020797.1 mouse_genomes_project 13 87004955 87006585 - MGP_129S1SvImJ_P0037730 Cox7c protein_coding protein_coding MGP_129S1SvImJ_T0037731.1 MGP_129S1SvImJ_G0020797.1 mouse_genomes_project 13 87004955 87007043 - MGP_129S1SvImJ_P0037731 Cox7c protein_coding protein_coding MGP_129S1SvImJ_T0037732.1 MGP_129S1SvImJ_G0020797.1 mouse_genomes_project 13 87004960 87006472 - MGP_129S1SvImJ_P0037732 Cox7c protein_coding protein_coding MGP_129S1SvImJ_T0037733.1 MGP_129S1SvImJ_G0020797.1 mouse_genomes_project 13 87005034 87006912 - Cox7c protein_coding processed_transcript MGP_129S1SvImJ_T0002524.1 MGP_129S1SvImJ_G0002431.1 mouse_genomes_project 13 16336969 16337029 + MGP_129S1SvImJ_P0002524 Trgj2 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0037176.1 MGP_129S1SvImJ_G0020591.1 mouse_genomes_project 13 54795335 54799920 - MGP_129S1SvImJ_P0037176 Mxd3 protein_coding protein_coding MGP_129S1SvImJ_T0037177.1 MGP_129S1SvImJ_G0020591.1 mouse_genomes_project 13 54795649 54799895 - Mxd3 protein_coding retained_intron MGP_129S1SvImJ_T0037178.1 MGP_129S1SvImJ_G0020591.1 mouse_genomes_project 13 54795879 54799514 - Mxd3 protein_coding processed_transcript MGP_129S1SvImJ_T0037765.1 MGP_129S1SvImJ_G0020807.1 mouse_genomes_project 13 92726429 92980723 + Ssbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0037766.1 MGP_129S1SvImJ_G0020807.1 mouse_genomes_project 13 92727168 92997014 + MGP_129S1SvImJ_P0037766 Ssbp2 protein_coding protein_coding MGP_129S1SvImJ_T0037767.1 MGP_129S1SvImJ_G0020807.1 mouse_genomes_project 13 92727209 92994821 + MGP_129S1SvImJ_P0037767 Ssbp2 protein_coding protein_coding MGP_129S1SvImJ_T0037768.1 MGP_129S1SvImJ_G0020807.1 mouse_genomes_project 13 92727245 92821114 + MGP_129S1SvImJ_P0037768 Ssbp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037769.1 MGP_129S1SvImJ_G0020807.1 mouse_genomes_project 13 92727278 92960058 + Ssbp2 protein_coding retained_intron MGP_129S1SvImJ_T0037770.1 MGP_129S1SvImJ_G0020807.1 mouse_genomes_project 13 92727281 92846947 + Ssbp2 protein_coding retained_intron MGP_129S1SvImJ_T0037771.1 MGP_129S1SvImJ_G0020807.1 mouse_genomes_project 13 92727299 92801068 + Ssbp2 protein_coding retained_intron MGP_129S1SvImJ_T0037772.1 MGP_129S1SvImJ_G0020807.1 mouse_genomes_project 13 92727305 92995656 + MGP_129S1SvImJ_P0037772 Ssbp2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0037773.1 MGP_129S1SvImJ_G0020807.1 mouse_genomes_project 13 92958086 92985017 + Ssbp2 protein_coding retained_intron MGP_129S1SvImJ_T0003494.1 MGP_129S1SvImJ_G0003196.1 mouse_genomes_project 13 67973364 68020697 - 4930525G20Rik antisense antisense MGP_129S1SvImJ_T0036711.1 MGP_129S1SvImJ_G0020442.1 mouse_genomes_project 13 31983514 32008838 - MGP_129S1SvImJ_P0036711 Serpinb6c protein_coding protein_coding MGP_129S1SvImJ_T0036712.1 MGP_129S1SvImJ_G0020442.1 mouse_genomes_project 13 31983515 32009376 - MGP_129S1SvImJ_P0036712 Serpinb6c protein_coding protein_coding MGP_129S1SvImJ_T0003466.1 MGP_129S1SvImJ_G0003179.1 mouse_genomes_project 13 27780749 27782728 + Gm11365 antisense antisense MGP_129S1SvImJ_T0036679.1 MGP_129S1SvImJ_G0020424.1 mouse_genomes_project 13 29763587 30306729 - MGP_129S1SvImJ_P0036679 Gmds protein_coding protein_coding MGP_129S1SvImJ_T0036680.1 MGP_129S1SvImJ_G0020424.1 mouse_genomes_project 13 30052625 30306602 - Gmds protein_coding retained_intron MGP_129S1SvImJ_T0036681.1 MGP_129S1SvImJ_G0020424.1 mouse_genomes_project 13 30116087 30193052 - Gmds protein_coding processed_transcript MGP_129S1SvImJ_T0036682.1 MGP_129S1SvImJ_G0020424.1 mouse_genomes_project 13 30189973 30306641 - MGP_129S1SvImJ_P0036682 Gmds protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0000903.1 MGP_129S1SvImJ_G0000835.1 mouse_genomes_project 13 39205080 39207718 - TEC TEC MGP_129S1SvImJ_T0036475.1 MGP_129S1SvImJ_G0020311.1 mouse_genomes_project 13 19513471 19514368 - MGP_129S1SvImJ_P0036475 Vmn1r191 protein_coding protein_coding MGP_129S1SvImJ_T0036472.1 MGP_129S1SvImJ_G0020308.1 mouse_genomes_project 13 19361184 19362965 - MGP_129S1SvImJ_P0036472 Hist1h4i protein_coding protein_coding MGP_129S1SvImJ_T0037512.1 MGP_129S1SvImJ_G0020724.1 mouse_genomes_project 13 67953960 67966035 + MGP_129S1SvImJ_P0037512 Zfp493 protein_coding protein_coding MGP_129S1SvImJ_T0037513.1 MGP_129S1SvImJ_G0020724.1 mouse_genomes_project 13 67953960 67963274 + MGP_129S1SvImJ_P0037513 Zfp493 protein_coding protein_coding MGP_129S1SvImJ_T0037514.1 MGP_129S1SvImJ_G0020724.1 mouse_genomes_project 13 67960152 67964116 + Zfp493 protein_coding retained_intron MGP_129S1SvImJ_T0037373.1 MGP_129S1SvImJ_G0020666.1 mouse_genomes_project 13 62759950 62787201 - MGP_129S1SvImJ_P0037373 Fbp2 protein_coding protein_coding MGP_129S1SvImJ_T0038213.1 MGP_129S1SvImJ_G0020953.1 mouse_genomes_project 13 116315286 116316067 - MGP_129S1SvImJ_P0038213 Hspb3 protein_coding protein_coding MGP_129S1SvImJ_T0012878.1 MGP_129S1SvImJ_G0010967.1 mouse_genomes_project 13 5780592 5780743 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0037519.1 MGP_129S1SvImJ_G0020727.1 mouse_genomes_project 13 68776053 68798291 - MGP_129S1SvImJ_P0037519 Mtrr protein_coding protein_coding MGP_129S1SvImJ_T0000910.1 MGP_129S1SvImJ_G0000842.1 mouse_genomes_project 13 71404476 71407720 - TEC TEC MGP_129S1SvImJ_T0037563.1 MGP_129S1SvImJ_G0020749.1 mouse_genomes_project 13 74129632 74149722 - MGP_129S1SvImJ_P0037563 Slc6a18 protein_coding protein_coding MGP_129S1SvImJ_T0037564.1 MGP_129S1SvImJ_G0020749.1 mouse_genomes_project 13 74135822 74149628 - MGP_129S1SvImJ_P0037564 Slc6a18 protein_coding protein_coding MGP_129S1SvImJ_T0012891.1 MGP_129S1SvImJ_G0010980.1 mouse_genomes_project 13 19416039 19416319 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102205.1 MGP_129S1SvImJ_G0040039.1 mouse_genomes_project 13 20376462 20376699 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0036522.1 MGP_129S1SvImJ_G0020352.1 mouse_genomes_project 13 21007256 21007649 + MGP_129S1SvImJ_P0036522 Hist1h4d protein_coding protein_coding MGP_129S1SvImJ_T0017375.1 MGP_129S1SvImJ_G0015248.1 mouse_genomes_project 13 19346174 19351163 + Gm11292 processed_transcript processed_transcript MGP_129S1SvImJ_T0012940.1 MGP_129S1SvImJ_G0011029.1 mouse_genomes_project 13 67607048 67607748 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012961.1 MGP_129S1SvImJ_G0011050.1 mouse_genomes_project 13 89248758 89249554 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0037880.1 MGP_129S1SvImJ_G0020845.1 mouse_genomes_project 13 97185836 97191494 + MGP_129S1SvImJ_P0037880 F2rl2 protein_coding protein_coding MGP_129S1SvImJ_T0002611.1 MGP_129S1SvImJ_G0002512.1 mouse_genomes_project 13 16300734 16301308 + MGP_129S1SvImJ_P0002611 Tcrg-V6 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002612.1 MGP_129S1SvImJ_G0002512.1 mouse_genomes_project 13 16300746 16301308 + MGP_129S1SvImJ_P0002612 Tcrg-V6 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0037487.1 MGP_129S1SvImJ_G0020709.1 mouse_genomes_project 13 67491230 67518413 - MGP_129S1SvImJ_P0037487 Gm28041 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0009935.1 MGP_129S1SvImJ_G0008051.1 mouse_genomes_project 13 19205559 19205691 - Mir1983 miRNA miRNA MGP_129S1SvImJ_T0038196.1 MGP_129S1SvImJ_G0020944.1 mouse_genomes_project 13 115596434 115602966 + MGP_129S1SvImJ_P0038196 Mcidas protein_coding protein_coding MGP_129S1SvImJ_T0100632.1 MGP_129S1SvImJ_G0038699.1 mouse_genomes_project 13 45551069 45551199 - Gm24620 snoRNA snoRNA MGP_129S1SvImJ_T0006619.1 MGP_129S1SvImJ_G0005487.1 mouse_genomes_project 13 84578432 84590161 - lincRNA lincRNA MGP_129S1SvImJ_T0038272.1 MGP_129S1SvImJ_G0020982.1 mouse_genomes_project 13 122803191 122803646 + MGP_129S1SvImJ_P0038272 protein_coding protein_coding MGP_129S1SvImJ_T0006544.1 MGP_129S1SvImJ_G0005436.1 mouse_genomes_project 13 29209376 29311286 + Gm11376 lincRNA lincRNA MGP_129S1SvImJ_T0037858.1 MGP_129S1SvImJ_G0020837.1 mouse_genomes_project 13 96468897 96704109 - MGP_129S1SvImJ_P0037858 Pde8b protein_coding protein_coding MGP_129S1SvImJ_T0037859.1 MGP_129S1SvImJ_G0020837.1 mouse_genomes_project 13 96468902 96478693 - MGP_129S1SvImJ_P0037859 Pde8b protein_coding protein_coding MGP_129S1SvImJ_T0037860.1 MGP_129S1SvImJ_G0020837.1 mouse_genomes_project 13 96468948 96676730 - MGP_129S1SvImJ_P0037860 Pde8b protein_coding protein_coding MGP_129S1SvImJ_T0037861.1 MGP_129S1SvImJ_G0020837.1 mouse_genomes_project 13 96469773 96490502 - Pde8b protein_coding processed_transcript MGP_129S1SvImJ_T0037862.1 MGP_129S1SvImJ_G0020837.1 mouse_genomes_project 13 96470546 96703939 - MGP_129S1SvImJ_P0037862 Pde8b protein_coding protein_coding MGP_129S1SvImJ_T0037863.1 MGP_129S1SvImJ_G0020837.1 mouse_genomes_project 13 96470563 96676477 - MGP_129S1SvImJ_P0037863 Pde8b protein_coding protein_coding MGP_129S1SvImJ_T0037864.1 MGP_129S1SvImJ_G0020837.1 mouse_genomes_project 13 96470563 96676477 - MGP_129S1SvImJ_P0037864 Pde8b protein_coding protein_coding MGP_129S1SvImJ_T0037865.1 MGP_129S1SvImJ_G0020837.1 mouse_genomes_project 13 96470563 96676477 - MGP_129S1SvImJ_P0037865 Pde8b protein_coding protein_coding MGP_129S1SvImJ_T0037866.1 MGP_129S1SvImJ_G0020837.1 mouse_genomes_project 13 96478385 96677219 - MGP_129S1SvImJ_P0037866 Pde8b protein_coding protein_coding MGP_129S1SvImJ_T0037867.1 MGP_129S1SvImJ_G0020837.1 mouse_genomes_project 13 96487457 96704047 - MGP_129S1SvImJ_P0037867 Pde8b protein_coding protein_coding MGP_129S1SvImJ_T0037868.1 MGP_129S1SvImJ_G0020837.1 mouse_genomes_project 13 96487903 96497428 - Pde8b protein_coding retained_intron MGP_129S1SvImJ_T0037869.1 MGP_129S1SvImJ_G0020837.1 mouse_genomes_project 13 96535605 96676730 - Pde8b protein_coding retained_intron MGP_129S1SvImJ_T0037870.1 MGP_129S1SvImJ_G0020837.1 mouse_genomes_project 13 96546455 96704088 - MGP_129S1SvImJ_P0037870 Pde8b protein_coding protein_coding MGP_129S1SvImJ_T0037871.1 MGP_129S1SvImJ_G0020837.1 mouse_genomes_project 13 96551275 96638675 - Pde8b protein_coding processed_transcript MGP_129S1SvImJ_T0006591.1 MGP_129S1SvImJ_G0005466.1 mouse_genomes_project 13 53794539 53794782 - Gm16248 lincRNA lincRNA MGP_129S1SvImJ_T0037191.1 MGP_129S1SvImJ_G0020599.1 mouse_genomes_project 13 54958605 54975500 - MGP_129S1SvImJ_P0037191 Dbn1 protein_coding protein_coding MGP_129S1SvImJ_T0037192.1 MGP_129S1SvImJ_G0020599.1 mouse_genomes_project 13 54958605 54975500 - MGP_129S1SvImJ_P0037192 Dbn1 protein_coding protein_coding MGP_129S1SvImJ_T0037193.1 MGP_129S1SvImJ_G0020599.1 mouse_genomes_project 13 54959121 54975450 - MGP_129S1SvImJ_P0037193 Dbn1 protein_coding protein_coding MGP_129S1SvImJ_T0037194.1 MGP_129S1SvImJ_G0020599.1 mouse_genomes_project 13 54960302 54975455 - Dbn1 protein_coding retained_intron MGP_129S1SvImJ_T0037195.1 MGP_129S1SvImJ_G0020599.1 mouse_genomes_project 13 54966538 54968510 - Dbn1 protein_coding retained_intron MGP_129S1SvImJ_T0037196.1 MGP_129S1SvImJ_G0020599.1 mouse_genomes_project 13 54966560 54968623 - Dbn1 protein_coding retained_intron MGP_129S1SvImJ_T0037197.1 MGP_129S1SvImJ_G0020599.1 mouse_genomes_project 13 54967915 54974007 - MGP_129S1SvImJ_P0037197 Dbn1 protein_coding protein_coding MGP_129S1SvImJ_T0037198.1 MGP_129S1SvImJ_G0020599.1 mouse_genomes_project 13 54968032 54973034 - Dbn1 protein_coding processed_transcript MGP_129S1SvImJ_T0037199.1 MGP_129S1SvImJ_G0020599.1 mouse_genomes_project 13 54968645 54970335 - Dbn1 protein_coding retained_intron MGP_129S1SvImJ_T0003498.1 MGP_129S1SvImJ_G0003199.1 mouse_genomes_project 13 74172719 74182802 + Slc6a19os antisense antisense MGP_129S1SvImJ_T0003499.1 MGP_129S1SvImJ_G0003199.1 mouse_genomes_project 13 74176609 74181863 + Slc6a19os antisense antisense MGP_129S1SvImJ_T0003454.1 MGP_129S1SvImJ_G0003169.1 mouse_genomes_project 13 19047304 19048642 + Gm11274 antisense antisense MGP_129S1SvImJ_T0017377.1 MGP_129S1SvImJ_G0015250.1 mouse_genomes_project 13 20938273 20942216 - Gm11335 processed_transcript processed_transcript MGP_129S1SvImJ_T0037432.1 MGP_129S1SvImJ_G0020682.1 mouse_genomes_project 13 64947626 64953486 + MGP_129S1SvImJ_P0037432 Spata31 protein_coding protein_coding MGP_129S1SvImJ_T0038205.1 MGP_129S1SvImJ_G0020949.1 mouse_genomes_project 13 115793041 115851447 - MGP_129S1SvImJ_P0038205 Gzmk protein_coding protein_coding MGP_129S1SvImJ_T0038206.1 MGP_129S1SvImJ_G0020949.1 mouse_genomes_project 13 115793071 115802407 - MGP_129S1SvImJ_P0038206 Gzmk protein_coding protein_coding MGP_129S1SvImJ_T0038207.1 MGP_129S1SvImJ_G0020949.1 mouse_genomes_project 13 115793225 115802431 - MGP_129S1SvImJ_P0038207 Gzmk protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0012971.1 MGP_129S1SvImJ_G0011060.1 mouse_genomes_project 13 105479384 105482475 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038115.1 MGP_129S1SvImJ_G0020920.1 mouse_genomes_project 13 109648481 109650306 - MGP_129S1SvImJ_P0038115 protein_coding protein_coding MGP_129S1SvImJ_T0006565.1 MGP_129S1SvImJ_G0005451.1 mouse_genomes_project 13 37341627 37347308 + 5033403F01Rik lincRNA lincRNA MGP_129S1SvImJ_T0036339.1 MGP_129S1SvImJ_G0020242.1 mouse_genomes_project 13 11032371 11099510 + Arid4b protein_coding processed_transcript MGP_129S1SvImJ_T0036340.1 MGP_129S1SvImJ_G0020242.1 mouse_genomes_project 13 11032923 11146074 + MGP_129S1SvImJ_P0036340 Arid4b protein_coding protein_coding MGP_129S1SvImJ_T0036341.1 MGP_129S1SvImJ_G0020242.1 mouse_genomes_project 13 11032924 11175356 + MGP_129S1SvImJ_P0036341 Arid4b protein_coding protein_coding MGP_129S1SvImJ_T0036342.1 MGP_129S1SvImJ_G0020242.1 mouse_genomes_project 13 11032931 11175351 + MGP_129S1SvImJ_P0036342 Arid4b protein_coding protein_coding MGP_129S1SvImJ_T0036343.1 MGP_129S1SvImJ_G0020242.1 mouse_genomes_project 13 11032931 11175592 + MGP_129S1SvImJ_P0036343 Arid4b protein_coding protein_coding MGP_129S1SvImJ_T0036344.1 MGP_129S1SvImJ_G0020242.1 mouse_genomes_project 13 11032938 11141789 + MGP_129S1SvImJ_P0036344 Arid4b protein_coding protein_coding MGP_129S1SvImJ_T0036345.1 MGP_129S1SvImJ_G0020242.1 mouse_genomes_project 13 11033194 11093808 + Arid4b protein_coding processed_transcript MGP_129S1SvImJ_T0036346.1 MGP_129S1SvImJ_G0020242.1 mouse_genomes_project 13 11146092 11169706 + MGP_129S1SvImJ_P0036346 Arid4b protein_coding protein_coding MGP_129S1SvImJ_T0036347.1 MGP_129S1SvImJ_G0020242.1 mouse_genomes_project 13 11154000 11167209 + Arid4b protein_coding processed_transcript MGP_129S1SvImJ_T0036348.1 MGP_129S1SvImJ_G0020242.1 mouse_genomes_project 13 11167151 11173743 + Arid4b protein_coding processed_transcript MGP_129S1SvImJ_T0038081.1 MGP_129S1SvImJ_G0020909.1 mouse_genomes_project 13 106741327 106930499 - MGP_129S1SvImJ_P0038081 Cwc27 protein_coding protein_coding MGP_129S1SvImJ_T0038082.1 MGP_129S1SvImJ_G0020909.1 mouse_genomes_project 13 106860327 106904755 - Cwc27 protein_coding processed_transcript MGP_129S1SvImJ_T0038083.1 MGP_129S1SvImJ_G0020909.1 mouse_genomes_project 13 106902619 106904790 - Cwc27 protein_coding processed_transcript MGP_129S1SvImJ_T0038085.1 MGP_129S1SvImJ_G0020909.1 mouse_genomes_project 13 106921385 106930688 - MGP_129S1SvImJ_P0038085 Cwc27 protein_coding protein_coding MGP_129S1SvImJ_T0003467.1 MGP_129S1SvImJ_G0003180.1 mouse_genomes_project 13 29739431 29742471 + Gm11379 antisense antisense MGP_129S1SvImJ_T0037354.1 MGP_129S1SvImJ_G0020649.1 mouse_genomes_project 13 60564529 60568986 - MGP_129S1SvImJ_P0037354 BC051665 protein_coding protein_coding MGP_129S1SvImJ_T0036787.1 MGP_129S1SvImJ_G0020467.1 mouse_genomes_project 13 36281947 36306557 - MGP_129S1SvImJ_P0036787 Ssr1 protein_coding protein_coding MGP_129S1SvImJ_T0036594.1 MGP_129S1SvImJ_G0020382.1 mouse_genomes_project 13 22322220 22341339 + MGP_129S1SvImJ_P0036594 Tdp2 protein_coding protein_coding MGP_129S1SvImJ_T0036595.1 MGP_129S1SvImJ_G0020382.1 mouse_genomes_project 13 22322363 22337430 + Tdp2 protein_coding processed_transcript MGP_129S1SvImJ_T0006522.1 MGP_129S1SvImJ_G0005420.1 mouse_genomes_project 13 2396746 2399329 - 1700016G22Rik lincRNA lincRNA MGP_129S1SvImJ_T0006523.1 MGP_129S1SvImJ_G0005420.1 mouse_genomes_project 13 2396746 2398949 - 1700016G22Rik lincRNA lincRNA MGP_129S1SvImJ_T0037982.1 MGP_129S1SvImJ_G0020882.1 mouse_genomes_project 13 101977510 102046113 - MGP_129S1SvImJ_P0037982 Naip2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0037983.1 MGP_129S1SvImJ_G0020882.1 mouse_genomes_project 13 101977526 102051046 - MGP_129S1SvImJ_P0037983 Naip2 protein_coding protein_coding MGP_129S1SvImJ_T0037984.1 MGP_129S1SvImJ_G0020882.1 mouse_genomes_project 13 101977526 102046114 - MGP_129S1SvImJ_P0037984 Naip2 protein_coding protein_coding MGP_129S1SvImJ_T0037985.1 MGP_129S1SvImJ_G0020882.1 mouse_genomes_project 13 101977694 102050917 - MGP_129S1SvImJ_P0037985 Naip2 protein_coding protein_coding MGP_129S1SvImJ_T0037947.1 MGP_129S1SvImJ_G0020869.1 mouse_genomes_project 13 100421694 100430294 - MGP_129S1SvImJ_P0037947 Tmem171 protein_coding protein_coding MGP_129S1SvImJ_T0037948.1 MGP_129S1SvImJ_G0020869.1 mouse_genomes_project 13 100427773 100430228 - MGP_129S1SvImJ_P0037948 Tmem171 protein_coding protein_coding MGP_129S1SvImJ_T0037957.1 MGP_129S1SvImJ_G0020873.1 mouse_genomes_project 13 100964479 101026818 + MGP_129S1SvImJ_P0037957 Zfp366 protein_coding protein_coding MGP_129S1SvImJ_T0098491.1 MGP_129S1SvImJ_G0036576.1 mouse_genomes_project 13 119588179 119588270 + Gm23198 rRNA rRNA MGP_129S1SvImJ_T0036752.1 MGP_129S1SvImJ_G0020454.1 mouse_genomes_project 13 33050776 33060805 - MGP_129S1SvImJ_P0036752 Fam217a protein_coding protein_coding MGP_129S1SvImJ_T0102231.1 MGP_129S1SvImJ_G0040065.1 mouse_genomes_project 13 58048113 58049964 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0036362.1 MGP_129S1SvImJ_G0020251.1 mouse_genomes_project 13 14750890 14752728 + MGP_129S1SvImJ_P0036362 Mplkip protein_coding protein_coding MGP_129S1SvImJ_T0012915.1 MGP_129S1SvImJ_G0011004.1 mouse_genomes_project 13 26257984 26258473 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006592.1 MGP_129S1SvImJ_G0005467.1 mouse_genomes_project 13 54314181 54314725 + Gm29431 lincRNA lincRNA MGP_129S1SvImJ_T0000924.1 MGP_129S1SvImJ_G0000856.1 mouse_genomes_project 13 103744840 103745240 - TEC TEC MGP_129S1SvImJ_T0003461.1 MGP_129S1SvImJ_G0003175.1 mouse_genomes_project 13 21241067 21250878 - Gm11337 antisense antisense MGP_129S1SvImJ_T0102232.1 MGP_129S1SvImJ_G0040066.1 mouse_genomes_project 13 108369794 108370350 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0037625.1 MGP_129S1SvImJ_G0020777.1 mouse_genomes_project 13 76607239 76642241 - MGP_129S1SvImJ_P0037625 Arsk protein_coding protein_coding MGP_129S1SvImJ_T0037626.1 MGP_129S1SvImJ_G0020777.1 mouse_genomes_project 13 76618793 76642253 - Arsk protein_coding retained_intron MGP_129S1SvImJ_T0037816.1 MGP_129S1SvImJ_G0020821.1 mouse_genomes_project 13 94172475 94185919 + MGP_129S1SvImJ_P0037816 Mtx3 protein_coding protein_coding MGP_129S1SvImJ_T0006617.1 MGP_129S1SvImJ_G0005486.1 mouse_genomes_project 13 84576386 84744181 + lincRNA lincRNA MGP_129S1SvImJ_T0006618.1 MGP_129S1SvImJ_G0005486.1 mouse_genomes_project 13 84576386 84603155 + lincRNA lincRNA MGP_129S1SvImJ_T0006620.1 MGP_129S1SvImJ_G0005486.1 mouse_genomes_project 13 84586650 84597519 + lincRNA lincRNA MGP_129S1SvImJ_T0006621.1 MGP_129S1SvImJ_G0005486.1 mouse_genomes_project 13 84593124 84597370 + lincRNA lincRNA MGP_129S1SvImJ_T0006622.1 MGP_129S1SvImJ_G0005486.1 mouse_genomes_project 13 84600711 84755712 + lincRNA lincRNA MGP_129S1SvImJ_T0037468.1 MGP_129S1SvImJ_G0020698.1 mouse_genomes_project 13 67200409 67217817 - MGP_129S1SvImJ_P0037468 Rslcan18 protein_coding protein_coding MGP_129S1SvImJ_T0037470.1 MGP_129S1SvImJ_G0020698.1 mouse_genomes_project 13 67214809 67220046 - Rslcan18 protein_coding retained_intron MGP_129S1SvImJ_T0011382.1 MGP_129S1SvImJ_G0009498.1 mouse_genomes_project 13 105498969 105499250 - Gm24441 misc_RNA misc_RNA MGP_129S1SvImJ_T0037362.1 MGP_129S1SvImJ_G0020656.1 mouse_genomes_project 13 60776523 60782161 - MGP_129S1SvImJ_P0037362 Ctsj protein_coding protein_coding MGP_129S1SvImJ_T0036698.1 MGP_129S1SvImJ_G0020432.1 mouse_genomes_project 13 31041595 31063692 + MGP_129S1SvImJ_P0036698 Serpinb9b protein_coding protein_coding MGP_129S1SvImJ_T0003525.1 MGP_129S1SvImJ_G0003211.1 mouse_genomes_project 13 104817449 104819096 + 1700099I09Rik antisense antisense MGP_129S1SvImJ_T0003526.1 MGP_129S1SvImJ_G0003211.1 mouse_genomes_project 13 104817464 104819062 + 1700099I09Rik antisense antisense MGP_129S1SvImJ_T0036614.1 MGP_129S1SvImJ_G0020389.1 mouse_genomes_project 13 24347508 24349448 - MGP_129S1SvImJ_P0036614 Hdgfl1 protein_coding protein_coding MGP_129S1SvImJ_T0037475.1 MGP_129S1SvImJ_G0020702.1 mouse_genomes_project 13 67310654 67319203 + MGP_129S1SvImJ_P0037475 protein_coding protein_coding MGP_129S1SvImJ_T0037230.1 MGP_129S1SvImJ_G0020611.1 mouse_genomes_project 13 55289969 55317987 + MGP_129S1SvImJ_P0037230 Catsper3 protein_coding protein_coding MGP_129S1SvImJ_T0037231.1 MGP_129S1SvImJ_G0020611.1 mouse_genomes_project 13 55289980 55318018 + MGP_129S1SvImJ_P0037231 Catsper3 protein_coding protein_coding MGP_129S1SvImJ_T0037324.1 MGP_129S1SvImJ_G0020638.1 mouse_genomes_project 13 59294297 59308824 + MGP_129S1SvImJ_P0037324 Naa35 protein_coding protein_coding MGP_129S1SvImJ_T0037325.1 MGP_129S1SvImJ_G0020638.1 mouse_genomes_project 13 59294333 59343285 + MGP_129S1SvImJ_P0037325 Naa35 protein_coding protein_coding MGP_129S1SvImJ_T0037326.1 MGP_129S1SvImJ_G0020638.1 mouse_genomes_project 13 59294432 59317845 + MGP_129S1SvImJ_P0037326 Naa35 protein_coding protein_coding MGP_129S1SvImJ_T0037327.1 MGP_129S1SvImJ_G0020638.1 mouse_genomes_project 13 59295208 59333001 + MGP_129S1SvImJ_P0037327 Naa35 protein_coding protein_coding MGP_129S1SvImJ_T0037328.1 MGP_129S1SvImJ_G0020638.1 mouse_genomes_project 13 59304392 59309297 + Naa35 protein_coding retained_intron MGP_129S1SvImJ_T0037329.1 MGP_129S1SvImJ_G0020638.1 mouse_genomes_project 13 59307149 59326485 + MGP_129S1SvImJ_P0037329 Naa35 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037330.1 MGP_129S1SvImJ_G0020638.1 mouse_genomes_project 13 59318290 59336117 + Naa35 protein_coding retained_intron MGP_129S1SvImJ_T0037331.1 MGP_129S1SvImJ_G0020638.1 mouse_genomes_project 13 59318415 59333932 + Naa35 protein_coding retained_intron MGP_129S1SvImJ_T0037332.1 MGP_129S1SvImJ_G0020638.1 mouse_genomes_project 13 59318450 59333958 + Naa35 protein_coding retained_intron MGP_129S1SvImJ_T0037333.1 MGP_129S1SvImJ_G0020638.1 mouse_genomes_project 13 59318535 59333073 + MGP_129S1SvImJ_P0037333 Naa35 protein_coding protein_coding MGP_129S1SvImJ_T0037334.1 MGP_129S1SvImJ_G0020638.1 mouse_genomes_project 13 59326451 59343236 + Naa35 protein_coding processed_transcript MGP_129S1SvImJ_T0037335.1 MGP_129S1SvImJ_G0020638.1 mouse_genomes_project 13 59326501 59334148 + Naa35 protein_coding retained_intron MGP_129S1SvImJ_T0037336.1 MGP_129S1SvImJ_G0020638.1 mouse_genomes_project 13 59326502 59336439 + MGP_129S1SvImJ_P0037336 Naa35 protein_coding protein_coding MGP_129S1SvImJ_T0037337.1 MGP_129S1SvImJ_G0020638.1 mouse_genomes_project 13 59332927 59337431 + Naa35 protein_coding retained_intron MGP_129S1SvImJ_T0037338.1 MGP_129S1SvImJ_G0020638.1 mouse_genomes_project 13 59341208 59343123 + Naa35 protein_coding retained_intron MGP_129S1SvImJ_T0012924.1 MGP_129S1SvImJ_G0011013.1 mouse_genomes_project 13 31138737 31139544 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036422.1 MGP_129S1SvImJ_G0020276.1 mouse_genomes_project 13 18706529 18718071 - MGP_129S1SvImJ_P0036422 Zscan26 protein_coding protein_coding MGP_129S1SvImJ_T0036423.1 MGP_129S1SvImJ_G0020276.1 mouse_genomes_project 13 18708851 18718074 - MGP_129S1SvImJ_P0036423 Zscan26 protein_coding protein_coding MGP_129S1SvImJ_T0009928.1 MGP_129S1SvImJ_G0008044.1 mouse_genomes_project 13 7287775 7287856 - Gm23415 miRNA miRNA MGP_129S1SvImJ_T0003477.1 MGP_129S1SvImJ_G0003188.1 mouse_genomes_project 13 53602530 53606101 - Gm16578 antisense antisense MGP_129S1SvImJ_T0037885.1 MGP_129S1SvImJ_G0020848.1 mouse_genomes_project 13 97916095 97944549 + MGP_129S1SvImJ_P0037885 Poc5 protein_coding protein_coding MGP_129S1SvImJ_T0006578.1 MGP_129S1SvImJ_G0005460.1 mouse_genomes_project 13 47156842 47158311 - A330048O09Rik lincRNA lincRNA MGP_129S1SvImJ_T0100634.1 MGP_129S1SvImJ_G0038701.1 mouse_genomes_project 13 47477094 47477226 - Gm25232 snoRNA snoRNA MGP_129S1SvImJ_T0036988.1 MGP_129S1SvImJ_G0020543.1 mouse_genomes_project 13 48914645 48920124 - MGP_129S1SvImJ_P0036988 Gm8674 protein_coding protein_coding MGP_129S1SvImJ_T0101620.1 MGP_129S1SvImJ_G0039663.1 mouse_genomes_project 13 22078518 22088884 - transcribed_processed_pseudogene retained_intron MGP_129S1SvImJ_T0101621.1 MGP_129S1SvImJ_G0039663.1 mouse_genomes_project 13 22079656 22080360 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101622.1 MGP_129S1SvImJ_G0039663.1 mouse_genomes_project 13 22080100 22088714 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101623.1 MGP_129S1SvImJ_G0039663.1 mouse_genomes_project 13 22080197 22088655 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0038216.1 MGP_129S1SvImJ_G0020956.1 mouse_genomes_project 13 117161829 117168288 - MGP_129S1SvImJ_P0038216 Fst protein_coding protein_coding MGP_129S1SvImJ_T0038217.1 MGP_129S1SvImJ_G0020956.1 mouse_genomes_project 13 117162990 117168144 - MGP_129S1SvImJ_P0038217 Fst protein_coding unknown_likely_coding MGP_129S1SvImJ_T0036219.1 MGP_129S1SvImJ_G0020210.1 mouse_genomes_project 13 1070311 1090446 - MGP_129S1SvImJ_P0036219 Akr1e1 protein_coding protein_coding MGP_129S1SvImJ_T0036220.1 MGP_129S1SvImJ_G0020210.1 mouse_genomes_project 13 1072046 1090446 - MGP_129S1SvImJ_P0036220 Akr1e1 protein_coding protein_coding MGP_129S1SvImJ_T0036221.1 MGP_129S1SvImJ_G0020210.1 mouse_genomes_project 13 1080825 1090406 - Akr1e1 protein_coding processed_transcript MGP_129S1SvImJ_T0006647.1 MGP_129S1SvImJ_G0005507.1 mouse_genomes_project 13 113847967 113856947 - Gm6270 lincRNA lincRNA MGP_129S1SvImJ_T0099352.1 MGP_129S1SvImJ_G0037419.1 mouse_genomes_project 13 21095901 21096005 + Gm22452 snRNA snRNA MGP_129S1SvImJ_T0037418.1 MGP_129S1SvImJ_G0020674.1 mouse_genomes_project 13 64150159 64171725 - MGP_129S1SvImJ_P0037418 Zfp367 protein_coding protein_coding MGP_129S1SvImJ_T0037419.1 MGP_129S1SvImJ_G0020674.1 mouse_genomes_project 13 64152545 64170952 - Zfp367 protein_coding processed_transcript MGP_129S1SvImJ_T0037420.1 MGP_129S1SvImJ_G0020674.1 mouse_genomes_project 13 64152672 64168735 - Zfp367 protein_coding processed_transcript MGP_129S1SvImJ_T0037421.1 MGP_129S1SvImJ_G0020674.1 mouse_genomes_project 13 64157814 64171725 - MGP_129S1SvImJ_P0037421 Zfp367 protein_coding protein_coding MGP_129S1SvImJ_T0102226.1 MGP_129S1SvImJ_G0040060.1 mouse_genomes_project 13 31858058 31861474 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0009963.1 MGP_129S1SvImJ_G0008079.1 mouse_genomes_project 13 63261291 63261376 - Mir3074-1 miRNA miRNA MGP_129S1SvImJ_T0036482.1 MGP_129S1SvImJ_G0020318.1 mouse_genomes_project 13 19686487 19687390 + MGP_129S1SvImJ_P0036482 Vmn1r198 protein_coding protein_coding MGP_129S1SvImJ_T0036350.1 MGP_129S1SvImJ_G0020244.1 mouse_genomes_project 13 11596897 11599612 - MGP_129S1SvImJ_P0036350 Mrpl32 protein_coding protein_coding MGP_129S1SvImJ_T0100651.1 MGP_129S1SvImJ_G0038718.1 mouse_genomes_project 13 87005125 87005185 - Gm22574 snoRNA snoRNA MGP_129S1SvImJ_T0012978.1 MGP_129S1SvImJ_G0011067.1 mouse_genomes_project 13 115724477 115724736 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036450.1 MGP_129S1SvImJ_G0020297.1 mouse_genomes_project 13 19064899 19066976 - MGP_129S1SvImJ_P0036450 Hist1h2ao protein_coding protein_coding MGP_129S1SvImJ_T0037343.1 MGP_129S1SvImJ_G0020642.1 mouse_genomes_project 13 59438277 59444105 - MGP_129S1SvImJ_P0037343 Spata31d1d protein_coding protein_coding MGP_129S1SvImJ_T0036897.1 MGP_129S1SvImJ_G0020513.1 mouse_genomes_project 13 45270541 45423248 + MGP_129S1SvImJ_P0036897 Cap2 protein_coding protein_coding MGP_129S1SvImJ_T0036898.1 MGP_129S1SvImJ_G0020513.1 mouse_genomes_project 13 45413067 45419528 + Cap2 protein_coding processed_transcript MGP_129S1SvImJ_T0100627.1 MGP_129S1SvImJ_G0038694.1 mouse_genomes_project 13 22295290 22295412 - Gm22358 snoRNA snoRNA MGP_129S1SvImJ_T0036354.1 MGP_129S1SvImJ_G0020247.1 mouse_genomes_project 13 12431387 12694275 + MGP_129S1SvImJ_P0036354 Gli3 protein_coding protein_coding MGP_129S1SvImJ_T0036355.1 MGP_129S1SvImJ_G0020247.1 mouse_genomes_project 13 12431403 12615750 + Gli3 protein_coding processed_transcript MGP_129S1SvImJ_T0036356.1 MGP_129S1SvImJ_G0020247.1 mouse_genomes_project 13 12431859 12638037 + Gli3 protein_coding retained_intron MGP_129S1SvImJ_T0036357.1 MGP_129S1SvImJ_G0020247.1 mouse_genomes_project 13 12432116 12709182 + MGP_129S1SvImJ_P0036357 Gli3 protein_coding protein_coding MGP_129S1SvImJ_T0036426.1 MGP_129S1SvImJ_G0020279.1 mouse_genomes_project 13 18744013 18749030 - MGP_129S1SvImJ_P0036426 Gm10065 protein_coding protein_coding MGP_129S1SvImJ_T0037212.1 MGP_129S1SvImJ_G0020601.1 mouse_genomes_project 13 55012646 55017952 - MGP_129S1SvImJ_P0037212 Dok3 protein_coding protein_coding MGP_129S1SvImJ_T0099361.1 MGP_129S1SvImJ_G0037428.1 mouse_genomes_project 13 40416329 40416433 + Gm22157 snRNA snRNA MGP_129S1SvImJ_T0037436.1 MGP_129S1SvImJ_G0020685.1 mouse_genomes_project 13 65076564 65129681 - MGP_129S1SvImJ_P0037436 Mfsd14b protein_coding protein_coding MGP_129S1SvImJ_T0037437.1 MGP_129S1SvImJ_G0020685.1 mouse_genomes_project 13 65076953 65129688 - MGP_129S1SvImJ_P0037437 Mfsd14b protein_coding protein_coding MGP_129S1SvImJ_T0037438.1 MGP_129S1SvImJ_G0020685.1 mouse_genomes_project 13 65078477 65081720 - Mfsd14b protein_coding retained_intron MGP_129S1SvImJ_T0036839.1 MGP_129S1SvImJ_G0020493.1 mouse_genomes_project 13 40577019 40709366 + MGP_129S1SvImJ_P0036839 Hivep1 protein_coding protein_coding MGP_129S1SvImJ_T0037260.1 MGP_129S1SvImJ_G0020624.1 mouse_genomes_project 13 56343254 56470432 - MGP_129S1SvImJ_P0037260 Trpc7 protein_coding protein_coding MGP_129S1SvImJ_T0037261.1 MGP_129S1SvImJ_G0020624.1 mouse_genomes_project 13 56343254 56470393 - MGP_129S1SvImJ_P0037261 Trpc7 protein_coding protein_coding MGP_129S1SvImJ_T0037262.1 MGP_129S1SvImJ_G0020624.1 mouse_genomes_project 13 56343409 56470445 - MGP_129S1SvImJ_P0037262 Trpc7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037263.1 MGP_129S1SvImJ_G0020624.1 mouse_genomes_project 13 56343907 56470150 - MGP_129S1SvImJ_P0037263 Trpc7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037264.1 MGP_129S1SvImJ_G0020624.1 mouse_genomes_project 13 56343907 56470150 - MGP_129S1SvImJ_P0037264 Trpc7 protein_coding protein_coding MGP_129S1SvImJ_T0037265.1 MGP_129S1SvImJ_G0020624.1 mouse_genomes_project 13 56343907 56470150 - MGP_129S1SvImJ_P0037265 Trpc7 protein_coding protein_coding MGP_129S1SvImJ_T0037266.1 MGP_129S1SvImJ_G0020624.1 mouse_genomes_project 13 56343907 56470150 - MGP_129S1SvImJ_P0037266 Trpc7 protein_coding protein_coding MGP_129S1SvImJ_T0037267.1 MGP_129S1SvImJ_G0020624.1 mouse_genomes_project 13 56343907 56470150 - MGP_129S1SvImJ_P0037267 Trpc7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036471.1 MGP_129S1SvImJ_G0020307.1 mouse_genomes_project 13 19356543 19356894 + MGP_129S1SvImJ_P0036471 protein_coding protein_coding MGP_129S1SvImJ_T0099367.1 MGP_129S1SvImJ_G0037434.1 mouse_genomes_project 13 55889959 55890063 - Gm24716 snRNA snRNA MGP_129S1SvImJ_T0012963.1 MGP_129S1SvImJ_G0011052.1 mouse_genomes_project 13 90838109 90838710 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009944.1 MGP_129S1SvImJ_G0008060.1 mouse_genomes_project 13 36404565 36404681 + Gm27387 miRNA miRNA MGP_129S1SvImJ_T0037777.1 MGP_129S1SvImJ_G0020809.1 mouse_genomes_project 13 93095935 93106047 - Zcchc9 protein_coding retained_intron MGP_129S1SvImJ_T0037778.1 MGP_129S1SvImJ_G0020809.1 mouse_genomes_project 13 93096525 93104476 - MGP_129S1SvImJ_P0037778 Zcchc9 protein_coding protein_coding MGP_129S1SvImJ_T0037779.1 MGP_129S1SvImJ_G0020809.1 mouse_genomes_project 13 93098224 93106003 - Zcchc9 protein_coding retained_intron MGP_129S1SvImJ_T0037780.1 MGP_129S1SvImJ_G0020809.1 mouse_genomes_project 13 93099880 93100391 - Zcchc9 protein_coding retained_intron MGP_129S1SvImJ_T0036626.1 MGP_129S1SvImJ_G0020397.1 mouse_genomes_project 13 25005050 25012470 - MGP_129S1SvImJ_P0036626 Prl2b1 protein_coding protein_coding MGP_129S1SvImJ_T0036627.1 MGP_129S1SvImJ_G0020397.1 mouse_genomes_project 13 25005050 25012470 - MGP_129S1SvImJ_P0036627 Prl2b1 protein_coding protein_coding MGP_129S1SvImJ_T0003528.1 MGP_129S1SvImJ_G0003213.1 mouse_genomes_project 13 106794760 106805114 + 2610204G07Rik antisense antisense MGP_129S1SvImJ_T0038239.1 MGP_129S1SvImJ_G0020966.1 mouse_genomes_project 13 121347131 121354274 - MGP_129S1SvImJ_P0038239 Mrps30 protein_coding protein_coding MGP_129S1SvImJ_T0036261.1 MGP_129S1SvImJ_G0020219.1 mouse_genomes_project 13 5512509 5519460 + MGP_129S1SvImJ_P0036261 Idi1 protein_coding protein_coding MGP_129S1SvImJ_T0036262.1 MGP_129S1SvImJ_G0020219.1 mouse_genomes_project 13 5512951 5517567 + MGP_129S1SvImJ_P0036262 Idi1 protein_coding protein_coding MGP_129S1SvImJ_T0036263.1 MGP_129S1SvImJ_G0020219.1 mouse_genomes_project 13 5513001 5518367 + MGP_129S1SvImJ_P0036263 Idi1 protein_coding protein_coding MGP_129S1SvImJ_T0036264.1 MGP_129S1SvImJ_G0020219.1 mouse_genomes_project 13 5513002 5517609 + MGP_129S1SvImJ_P0036264 Idi1 protein_coding protein_coding MGP_129S1SvImJ_T0036265.1 MGP_129S1SvImJ_G0020219.1 mouse_genomes_project 13 5514077 5517454 + Idi1 protein_coding retained_intron MGP_129S1SvImJ_T0017380.1 MGP_129S1SvImJ_G0015253.1 mouse_genomes_project 13 26212103 26269645 - processed_transcript processed_transcript MGP_129S1SvImJ_T0017381.1 MGP_129S1SvImJ_G0015253.1 mouse_genomes_project 13 26212847 26662358 - processed_transcript processed_transcript MGP_129S1SvImJ_T0017382.1 MGP_129S1SvImJ_G0015253.1 mouse_genomes_project 13 26212847 26227050 - processed_transcript processed_transcript MGP_129S1SvImJ_T0017383.1 MGP_129S1SvImJ_G0015253.1 mouse_genomes_project 13 26213010 26265303 - processed_transcript processed_transcript MGP_129S1SvImJ_T0017384.1 MGP_129S1SvImJ_G0015253.1 mouse_genomes_project 13 26252948 26265462 - processed_transcript processed_transcript MGP_129S1SvImJ_T0017385.1 MGP_129S1SvImJ_G0015253.1 mouse_genomes_project 13 26311999 26660194 - processed_transcript processed_transcript MGP_129S1SvImJ_T0017386.1 MGP_129S1SvImJ_G0015253.1 mouse_genomes_project 13 26426651 26662082 - processed_transcript processed_transcript MGP_129S1SvImJ_T0037649.1 MGP_129S1SvImJ_G0020784.1 mouse_genomes_project 13 78760125 78770910 - MGP_129S1SvImJ_P0037649 Nr2f1 protein_coding protein_coding MGP_129S1SvImJ_T0037650.1 MGP_129S1SvImJ_G0020784.1 mouse_genomes_project 13 78760304 78768191 - MGP_129S1SvImJ_P0037650 Nr2f1 protein_coding protein_coding MGP_129S1SvImJ_T0037651.1 MGP_129S1SvImJ_G0020784.1 mouse_genomes_project 13 78760816 78769083 - MGP_129S1SvImJ_P0037651 Nr2f1 protein_coding protein_coding MGP_129S1SvImJ_T0037652.1 MGP_129S1SvImJ_G0020784.1 mouse_genomes_project 13 78760877 78767522 - MGP_129S1SvImJ_P0037652 Nr2f1 protein_coding protein_coding MGP_129S1SvImJ_T0037653.1 MGP_129S1SvImJ_G0020784.1 mouse_genomes_project 13 78761016 78761588 - Nr2f1 protein_coding processed_transcript MGP_129S1SvImJ_T0003491.1 MGP_129S1SvImJ_G0003195.1 mouse_genomes_project 13 67506175 67514338 + antisense antisense MGP_129S1SvImJ_T0003500.1 MGP_129S1SvImJ_G0003200.1 mouse_genomes_project 13 74500585 74501788 - Gm15912 antisense antisense MGP_129S1SvImJ_T0012936.1 MGP_129S1SvImJ_G0011025.1 mouse_genomes_project 13 62687271 62687607 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100650.1 MGP_129S1SvImJ_G0038717.1 mouse_genomes_project 13 82846419 82846550 + Gm24295 snoRNA snoRNA MGP_129S1SvImJ_T0037450.1 MGP_129S1SvImJ_G0020693.1 mouse_genomes_project 13 67013006 67013602 + MGP_129S1SvImJ_P0037450 Gm10767 protein_coding protein_coding MGP_129S1SvImJ_T0098824.1 MGP_129S1SvImJ_G0036905.1 mouse_genomes_project 13 27042387 27046891 - sense_intronic sense_intronic MGP_129S1SvImJ_T0102216.1 MGP_129S1SvImJ_G0040050.1 mouse_genomes_project 13 25316882 25324506 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0006529.1 MGP_129S1SvImJ_G0005425.1 mouse_genomes_project 13 21801255 21802329 - Gm11342 lincRNA lincRNA MGP_129S1SvImJ_T0012901.1 MGP_129S1SvImJ_G0010990.1 mouse_genomes_project 13 21655451 21656516 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0037627.1 MGP_129S1SvImJ_G0020778.1 mouse_genomes_project 13 76642326 76733775 + MGP_129S1SvImJ_P0037627 Ttc37 protein_coding protein_coding MGP_129S1SvImJ_T0037628.1 MGP_129S1SvImJ_G0020778.1 mouse_genomes_project 13 76656752 76736114 + MGP_129S1SvImJ_P0037628 Ttc37 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0037629.1 MGP_129S1SvImJ_G0020778.1 mouse_genomes_project 13 76656782 76736114 + MGP_129S1SvImJ_P0037629 Ttc37 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0037554.1 MGP_129S1SvImJ_G0020745.1 mouse_genomes_project 13 73916128 73965321 + MGP_129S1SvImJ_P0037554 Lpcat1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037555.1 MGP_129S1SvImJ_G0020745.1 mouse_genomes_project 13 73916128 73965321 + MGP_129S1SvImJ_P0037555 Lpcat1 protein_coding protein_coding MGP_129S1SvImJ_T0037556.1 MGP_129S1SvImJ_G0020745.1 mouse_genomes_project 13 73916162 73964011 + MGP_129S1SvImJ_P0037556 Lpcat1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037557.1 MGP_129S1SvImJ_G0020745.1 mouse_genomes_project 13 73916354 73950368 + Lpcat1 protein_coding retained_intron MGP_129S1SvImJ_T0037558.1 MGP_129S1SvImJ_G0020745.1 mouse_genomes_project 13 73951770 73962740 + Lpcat1 protein_coding retained_intron MGP_129S1SvImJ_T0037559.1 MGP_129S1SvImJ_G0020745.1 mouse_genomes_project 13 73959848 73960506 + Lpcat1 protein_coding retained_intron MGP_129S1SvImJ_T0036929.1 MGP_129S1SvImJ_G0020522.1 mouse_genomes_project 13 47144989 47147599 + MGP_129S1SvImJ_P0036929 Id4 protein_coding protein_coding MGP_129S1SvImJ_T0036775.1 MGP_129S1SvImJ_G0020465.1 mouse_genomes_project 13 35600912 35679197 + MGP_129S1SvImJ_P0036775 Ly86 protein_coding protein_coding MGP_129S1SvImJ_T0037881.1 MGP_129S1SvImJ_G0020846.1 mouse_genomes_project 13 97456300 97640404 - MGP_129S1SvImJ_P0037881 Sv2c protein_coding protein_coding MGP_129S1SvImJ_T0037882.1 MGP_129S1SvImJ_G0020846.1 mouse_genomes_project 13 97462762 97487281 - Sv2c protein_coding processed_transcript MGP_129S1SvImJ_T0037883.1 MGP_129S1SvImJ_G0020846.1 mouse_genomes_project 13 97478209 97592822 - MGP_129S1SvImJ_P0037883 Sv2c protein_coding protein_coding MGP_129S1SvImJ_T0003495.1 MGP_129S1SvImJ_G0003197.1 mouse_genomes_project 13 69813275 69814237 - A530095I07Rik antisense antisense MGP_129S1SvImJ_T0036199.1 MGP_129S1SvImJ_G0020200.1 mouse_genomes_project 13 413811 424382 + MGP_129S1SvImJ_P0036199 Tubal3 protein_coding protein_coding MGP_129S1SvImJ_T0006598.1 MGP_129S1SvImJ_G0005472.1 mouse_genomes_project 13 57775762 57776678 + 1700066J03Rik lincRNA lincRNA MGP_129S1SvImJ_T0102194.1 MGP_129S1SvImJ_G0040028.1 mouse_genomes_project 13 19809977 19812582 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0037477.1 MGP_129S1SvImJ_G0020704.1 mouse_genomes_project 13 67400915 67416768 - MGP_129S1SvImJ_P0037477 Zfp458 protein_coding protein_coding MGP_129S1SvImJ_T0037630.1 MGP_129S1SvImJ_G0020779.1 mouse_genomes_project 13 76938687 77595053 + MGP_129S1SvImJ_P0037630 Mctp1 protein_coding protein_coding MGP_129S1SvImJ_T0037631.1 MGP_129S1SvImJ_G0020779.1 mouse_genomes_project 13 77139544 77319587 + MGP_129S1SvImJ_P0037631 Mctp1 protein_coding protein_coding MGP_129S1SvImJ_T0037632.1 MGP_129S1SvImJ_G0020779.1 mouse_genomes_project 13 77139598 77290148 + MGP_129S1SvImJ_P0037632 Mctp1 protein_coding protein_coding MGP_129S1SvImJ_T0037633.1 MGP_129S1SvImJ_G0020779.1 mouse_genomes_project 13 77139631 77593204 + MGP_129S1SvImJ_P0037633 Mctp1 protein_coding protein_coding MGP_129S1SvImJ_T0037634.1 MGP_129S1SvImJ_G0020779.1 mouse_genomes_project 13 77280978 77388515 + Mctp1 protein_coding retained_intron MGP_129S1SvImJ_T0037635.1 MGP_129S1SvImJ_G0020779.1 mouse_genomes_project 13 77384884 77387756 + Mctp1 protein_coding retained_intron MGP_129S1SvImJ_T0037636.1 MGP_129S1SvImJ_G0020779.1 mouse_genomes_project 13 77385123 77593991 + Mctp1 protein_coding retained_intron MGP_129S1SvImJ_T0037637.1 MGP_129S1SvImJ_G0020779.1 mouse_genomes_project 13 77385160 77387958 + Mctp1 protein_coding retained_intron MGP_129S1SvImJ_T0000921.1 MGP_129S1SvImJ_G0000853.1 mouse_genomes_project 13 102818607 102821982 + TEC TEC MGP_129S1SvImJ_T0036448.1 MGP_129S1SvImJ_G0020295.1 mouse_genomes_project 13 19036393 19037753 + MGP_129S1SvImJ_P0036448 Hist1h2bl protein_coding protein_coding MGP_129S1SvImJ_T0036620.1 MGP_129S1SvImJ_G0020393.1 mouse_genomes_project 13 24861141 24868359 + MGP_129S1SvImJ_P0036620 Prl3b1 protein_coding protein_coding MGP_129S1SvImJ_T0102189.1 MGP_129S1SvImJ_G0040023.1 mouse_genomes_project 13 19509607 19510372 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0037471.1 MGP_129S1SvImJ_G0020699.1 mouse_genomes_project 13 67241489 67256563 + MGP_129S1SvImJ_P0037471 Zfp759 protein_coding protein_coding MGP_129S1SvImJ_T0036408.1 MGP_129S1SvImJ_G0020271.1 mouse_genomes_project 13 18564570 18571901 + MGP_129S1SvImJ_P0036408 Gpx6 protein_coding protein_coding MGP_129S1SvImJ_T0036409.1 MGP_129S1SvImJ_G0020271.1 mouse_genomes_project 13 18569540 18571905 + Gpx6 protein_coding processed_transcript MGP_129S1SvImJ_T0009941.1 MGP_129S1SvImJ_G0008057.1 mouse_genomes_project 13 21385369 21385498 - Gm44344 miRNA miRNA MGP_129S1SvImJ_T0006563.1 MGP_129S1SvImJ_G0005449.1 mouse_genomes_project 13 35776449 35779580 + Gm29590 lincRNA lincRNA MGP_129S1SvImJ_T0017388.1 MGP_129S1SvImJ_G0015255.1 mouse_genomes_project 13 33327832 33330315 + 1700011B04Rik processed_transcript retained_intron MGP_129S1SvImJ_T0017389.1 MGP_129S1SvImJ_G0015255.1 mouse_genomes_project 13 33329188 33335578 + 1700011B04Rik processed_transcript lincRNA MGP_129S1SvImJ_T0003530.1 MGP_129S1SvImJ_G0003215.1 mouse_genomes_project 13 109036366 109038263 + Gm28988 antisense antisense MGP_129S1SvImJ_T0036187.1 MGP_129S1SvImJ_G0020193.1 mouse_genomes_project 13 6563 37100 + MGP_129S1SvImJ_P0036187 Gdi2 protein_coding protein_coding MGP_129S1SvImJ_T0009968.1 MGP_129S1SvImJ_G0008084.1 mouse_genomes_project 13 83494652 83494711 - Mir3961 miRNA miRNA MGP_129S1SvImJ_T0036930.1 MGP_129S1SvImJ_G0020523.1 mouse_genomes_project 13 47377014 47405774 - MGP_129S1SvImJ_P0036930 Zfp169 protein_coding protein_coding MGP_129S1SvImJ_T0036931.1 MGP_129S1SvImJ_G0020523.1 mouse_genomes_project 13 47377026 47405732 - MGP_129S1SvImJ_P0036931 Zfp169 protein_coding protein_coding MGP_129S1SvImJ_T0036932.1 MGP_129S1SvImJ_G0020523.1 mouse_genomes_project 13 47378569 47399343 - MGP_129S1SvImJ_P0036932 Zfp169 protein_coding protein_coding MGP_129S1SvImJ_T0036933.1 MGP_129S1SvImJ_G0020523.1 mouse_genomes_project 13 47378821 47399343 - MGP_129S1SvImJ_P0036933 Zfp169 protein_coding protein_coding MGP_129S1SvImJ_T0036934.1 MGP_129S1SvImJ_G0020523.1 mouse_genomes_project 13 47380619 47405748 - MGP_129S1SvImJ_P0036934 Zfp169 protein_coding protein_coding MGP_129S1SvImJ_T0036935.1 MGP_129S1SvImJ_G0020523.1 mouse_genomes_project 13 47380697 47405764 - MGP_129S1SvImJ_P0036935 Zfp169 protein_coding protein_coding MGP_129S1SvImJ_T0036936.1 MGP_129S1SvImJ_G0020523.1 mouse_genomes_project 13 47383882 47405789 - Zfp169 protein_coding retained_intron MGP_129S1SvImJ_T0006557.1 MGP_129S1SvImJ_G0005445.1 mouse_genomes_project 13 33109686 33128701 + Gm16984 lincRNA lincRNA MGP_129S1SvImJ_T0006558.1 MGP_129S1SvImJ_G0005445.1 mouse_genomes_project 13 33109739 33137234 + Gm16984 lincRNA lincRNA MGP_129S1SvImJ_T0036523.1 MGP_129S1SvImJ_G0020353.1 mouse_genomes_project 13 21009398 21052977 - MGP_129S1SvImJ_P0036523 Hist1h2be protein_coding protein_coding MGP_129S1SvImJ_T0036524.1 MGP_129S1SvImJ_G0020353.1 mouse_genomes_project 13 21009399 21053007 - MGP_129S1SvImJ_P0036524 Hist1h2be protein_coding protein_coding MGP_129S1SvImJ_T0036525.1 MGP_129S1SvImJ_G0020353.1 mouse_genomes_project 13 21050862 21052961 - Hist1h2be protein_coding processed_transcript MGP_129S1SvImJ_T0037553.1 MGP_129S1SvImJ_G0020744.1 mouse_genomes_project 13 73763815 73764982 + MGP_129S1SvImJ_P0037553 Mrpl36 protein_coding protein_coding MGP_129S1SvImJ_T0037460.1 MGP_129S1SvImJ_G0020694.1 mouse_genomes_project 13 67040156 67102638 + MGP_129S1SvImJ_P0037460 Ptdss1 protein_coding protein_coding MGP_129S1SvImJ_T0038003.1 MGP_129S1SvImJ_G0020888.1 mouse_genomes_project 13 102538014 102578317 - MGP_129S1SvImJ_P0038003 Rad17 protein_coding protein_coding MGP_129S1SvImJ_T0038004.1 MGP_129S1SvImJ_G0020888.1 mouse_genomes_project 13 102538014 102578317 - MGP_129S1SvImJ_P0038004 Rad17 protein_coding protein_coding MGP_129S1SvImJ_T0036705.1 MGP_129S1SvImJ_G0020437.1 mouse_genomes_project 13 31297705 31310811 + MGP_129S1SvImJ_P0036705 Serpinb9e protein_coding protein_coding MGP_129S1SvImJ_T0036799.1 MGP_129S1SvImJ_G0020473.1 mouse_genomes_project 13 36853057 36882409 - MGP_129S1SvImJ_P0036799 Txndc5 protein_coding protein_coding MGP_129S1SvImJ_T0036800.1 MGP_129S1SvImJ_G0020473.1 mouse_genomes_project 13 36853139 36881915 - MGP_129S1SvImJ_P0036800 Txndc5 protein_coding protein_coding MGP_129S1SvImJ_T0036801.1 MGP_129S1SvImJ_G0020473.1 mouse_genomes_project 13 36853143 36858808 - Txndc5 protein_coding retained_intron MGP_129S1SvImJ_T0037781.1 MGP_129S1SvImJ_G0020810.1 mouse_genomes_project 13 93143301 93167402 - MGP_129S1SvImJ_P0037781 Ckmt2 protein_coding protein_coding MGP_129S1SvImJ_T0009931.1 MGP_129S1SvImJ_G0008047.1 mouse_genomes_project 13 18709477 18709558 + Mir1896 miRNA miRNA MGP_129S1SvImJ_T0036624.1 MGP_129S1SvImJ_G0020396.1 mouse_genomes_project 13 24964505 24975492 + MGP_129S1SvImJ_P0036624 Prl8a2 protein_coding protein_coding MGP_129S1SvImJ_T0036625.1 MGP_129S1SvImJ_G0020396.1 mouse_genomes_project 13 24964511 24975480 + MGP_129S1SvImJ_P0036625 Prl8a2 protein_coding protein_coding MGP_129S1SvImJ_T0037646.1 MGP_129S1SvImJ_G0020782.1 mouse_genomes_project 13 78249691 78734566 + MGP_129S1SvImJ_P0037646 Fam172a protein_coding protein_coding MGP_129S1SvImJ_T0037647.1 MGP_129S1SvImJ_G0020782.1 mouse_genomes_project 13 78249696 78737146 + MGP_129S1SvImJ_P0037647 Fam172a protein_coding protein_coding MGP_129S1SvImJ_T0003475.1 MGP_129S1SvImJ_G0003186.1 mouse_genomes_project 13 41695531 41703512 - Gm15813 antisense antisense MGP_129S1SvImJ_T0100648.1 MGP_129S1SvImJ_G0038715.1 mouse_genomes_project 13 78218126 78218257 + Gm26088 snoRNA snoRNA MGP_129S1SvImJ_T0100647.1 MGP_129S1SvImJ_G0038714.1 mouse_genomes_project 13 77164455 77164587 - Gm24519 snoRNA snoRNA MGP_129S1SvImJ_T0036504.1 MGP_129S1SvImJ_G0020340.1 mouse_genomes_project 13 20756066 20772213 - MGP_129S1SvImJ_P0036504 Zfp322a protein_coding protein_coding MGP_129S1SvImJ_T0036505.1 MGP_129S1SvImJ_G0020340.1 mouse_genomes_project 13 20760035 20772005 - MGP_129S1SvImJ_P0036505 Zfp322a protein_coding protein_coding MGP_129S1SvImJ_T0036506.1 MGP_129S1SvImJ_G0020340.1 mouse_genomes_project 13 20760036 20772206 - MGP_129S1SvImJ_P0036506 Zfp322a protein_coding protein_coding MGP_129S1SvImJ_T0036507.1 MGP_129S1SvImJ_G0020340.1 mouse_genomes_project 13 20760197 20772199 - MGP_129S1SvImJ_P0036507 Zfp322a protein_coding protein_coding MGP_129S1SvImJ_T0036501.1 MGP_129S1SvImJ_G0020337.1 mouse_genomes_project 13 20553765 20556439 + MGP_129S1SvImJ_P0036501 Vmn1r219 protein_coding protein_coding MGP_129S1SvImJ_T0038063.1 MGP_129S1SvImJ_G0020902.1 mouse_genomes_project 13 106112699 106198589 - MGP_129S1SvImJ_P0038063 Nln protein_coding protein_coding MGP_129S1SvImJ_T0100625.1 MGP_129S1SvImJ_G0038692.1 mouse_genomes_project 13 20254544 20254675 - Gm23774 snoRNA snoRNA MGP_129S1SvImJ_T0009965.1 MGP_129S1SvImJ_G0008081.1 mouse_genomes_project 13 71440652 71440773 + Mir466f-4 miRNA miRNA MGP_129S1SvImJ_T0037461.1 MGP_129S1SvImJ_G0020695.1 mouse_genomes_project 13 67140860 67161226 - MGP_129S1SvImJ_P0037461 Zfp712 protein_coding protein_coding MGP_129S1SvImJ_T0037073.1 MGP_129S1SvImJ_G0020570.1 mouse_genomes_project 13 53953672 53967539 - 4833439L19Rik protein_coding processed_transcript MGP_129S1SvImJ_T0037074.1 MGP_129S1SvImJ_G0020570.1 mouse_genomes_project 13 53953888 53967553 - MGP_129S1SvImJ_P0037074 4833439L19Rik protein_coding protein_coding MGP_129S1SvImJ_T0037075.1 MGP_129S1SvImJ_G0020570.1 mouse_genomes_project 13 53958399 53967497 - 4833439L19Rik protein_coding retained_intron MGP_129S1SvImJ_T0037076.1 MGP_129S1SvImJ_G0020570.1 mouse_genomes_project 13 53958573 53967544 - 4833439L19Rik protein_coding retained_intron MGP_129S1SvImJ_T0037077.1 MGP_129S1SvImJ_G0020570.1 mouse_genomes_project 13 53958792 53967536 - MGP_129S1SvImJ_P0037077 4833439L19Rik protein_coding protein_coding MGP_129S1SvImJ_T0037078.1 MGP_129S1SvImJ_G0020570.1 mouse_genomes_project 13 53963776 53967550 - 4833439L19Rik protein_coding retained_intron MGP_129S1SvImJ_T0037079.1 MGP_129S1SvImJ_G0020570.1 mouse_genomes_project 13 53963898 53967562 - MGP_129S1SvImJ_P0037079 4833439L19Rik protein_coding protein_coding MGP_129S1SvImJ_T0037080.1 MGP_129S1SvImJ_G0020570.1 mouse_genomes_project 13 53963913 53967531 - MGP_129S1SvImJ_P0037080 4833439L19Rik protein_coding protein_coding MGP_129S1SvImJ_T0037763.1 MGP_129S1SvImJ_G0020805.1 mouse_genomes_project 13 92149213 92151025 + MGP_129S1SvImJ_P0037763 Rps23 protein_coding protein_coding MGP_129S1SvImJ_T0036480.1 MGP_129S1SvImJ_G0020316.1 mouse_genomes_project 13 19625746 19626652 + MGP_129S1SvImJ_P0036480 Vmn1r196 protein_coding protein_coding MGP_129S1SvImJ_T0036223.1 MGP_129S1SvImJ_G0020212.1 mouse_genomes_project 13 2402907 2411722 + MGP_129S1SvImJ_P0036223 Klf6 protein_coding protein_coding MGP_129S1SvImJ_T0038237.1 MGP_129S1SvImJ_G0020964.1 mouse_genomes_project 13 120138800 120193778 + MGP_129S1SvImJ_P0038237 Emb protein_coding protein_coding MGP_129S1SvImJ_T0003527.1 MGP_129S1SvImJ_G0003212.1 mouse_genomes_project 13 104819634 104823281 + Gm17160 antisense antisense MGP_129S1SvImJ_T0036476.1 MGP_129S1SvImJ_G0020312.1 mouse_genomes_project 13 19521826 19522729 - MGP_129S1SvImJ_P0036476 Vmn1r192 protein_coding protein_coding MGP_129S1SvImJ_T0006644.1 MGP_129S1SvImJ_G0005505.1 mouse_genomes_project 13 103582717 103583333 - Gm29341 lincRNA lincRNA MGP_129S1SvImJ_T0037274.1 MGP_129S1SvImJ_G0020626.1 mouse_genomes_project 13 57628303 57744318 - MGP_129S1SvImJ_P0037274 Klhl3 protein_coding protein_coding MGP_129S1SvImJ_T0037275.1 MGP_129S1SvImJ_G0020626.1 mouse_genomes_project 13 57629039 57733367 - MGP_129S1SvImJ_P0037275 Klhl3 protein_coding protein_coding MGP_129S1SvImJ_T0036474.1 MGP_129S1SvImJ_G0020310.1 mouse_genomes_project 13 19434715 19435902 - MGP_129S1SvImJ_P0036474 Vmn1r189 protein_coding protein_coding MGP_129S1SvImJ_T0036796.1 MGP_129S1SvImJ_G0020471.1 mouse_genomes_project 13 36533112 36555611 + MGP_129S1SvImJ_P0036796 Snrnp48 protein_coding protein_coding MGP_129S1SvImJ_T0036797.1 MGP_129S1SvImJ_G0020471.1 mouse_genomes_project 13 36533124 36554870 + MGP_129S1SvImJ_P0036797 Snrnp48 protein_coding protein_coding MGP_129S1SvImJ_T0037958.1 MGP_129S1SvImJ_G0020874.1 mouse_genomes_project 13 101102619 101127280 - MGP_129S1SvImJ_P0037958 Ptcd2 protein_coding protein_coding MGP_129S1SvImJ_T0102224.1 MGP_129S1SvImJ_G0040058.1 mouse_genomes_project 13 31811069 31814121 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0036640.1 MGP_129S1SvImJ_G0020405.1 mouse_genomes_project 13 25342402 25350428 - MGP_129S1SvImJ_P0036640 Prl7d1 protein_coding protein_coding MGP_129S1SvImJ_T0036641.1 MGP_129S1SvImJ_G0020405.1 mouse_genomes_project 13 25350097 25350416 - Prl7d1 protein_coding processed_transcript MGP_129S1SvImJ_T0037576.1 MGP_129S1SvImJ_G0020753.1 mouse_genomes_project 13 74397990 74426940 - MGP_129S1SvImJ_P0037576 Trip13 protein_coding protein_coding MGP_129S1SvImJ_T0003476.1 MGP_129S1SvImJ_G0003187.1 mouse_genomes_project 13 47813046 47817408 + Phf2os1 antisense antisense MGP_129S1SvImJ_T0036593.1 MGP_129S1SvImJ_G0020381.1 mouse_genomes_project 13 22301790 22322059 - MGP_129S1SvImJ_P0036593 Acot13 protein_coding protein_coding MGP_129S1SvImJ_T0099357.1 MGP_129S1SvImJ_G0037424.1 mouse_genomes_project 13 30760545 30760654 + Gm27342 snRNA snRNA MGP_129S1SvImJ_T0037886.1 MGP_129S1SvImJ_G0020849.1 mouse_genomes_project 13 97945099 97967862 - Ankdd1b protein_coding processed_transcript MGP_129S1SvImJ_T0037887.1 MGP_129S1SvImJ_G0020849.1 mouse_genomes_project 13 97945411 98004327 - MGP_129S1SvImJ_P0037887 Ankdd1b protein_coding protein_coding MGP_129S1SvImJ_T0037888.1 MGP_129S1SvImJ_G0020849.1 mouse_genomes_project 13 97945722 97967223 - Ankdd1b protein_coding retained_intron MGP_129S1SvImJ_T0037889.1 MGP_129S1SvImJ_G0020849.1 mouse_genomes_project 13 97946059 97967189 - MGP_129S1SvImJ_P0037889 Ankdd1b protein_coding protein_coding MGP_129S1SvImJ_T0037890.1 MGP_129S1SvImJ_G0020849.1 mouse_genomes_project 13 97967180 97976965 - Ankdd1b protein_coding retained_intron MGP_129S1SvImJ_T0037891.1 MGP_129S1SvImJ_G0020849.1 mouse_genomes_project 13 97975287 98004365 - MGP_129S1SvImJ_P0037891 Ankdd1b protein_coding protein_coding MGP_129S1SvImJ_T0003496.1 MGP_129S1SvImJ_G0003198.1 mouse_genomes_project 13 70879983 70884175 + 1700100L14Rik antisense antisense MGP_129S1SvImJ_T0003497.1 MGP_129S1SvImJ_G0003198.1 mouse_genomes_project 13 70880022 70884170 + 1700100L14Rik antisense antisense MGP_129S1SvImJ_T0036188.1 MGP_129S1SvImJ_G0020194.1 mouse_genomes_project 13 36875 89052 - MGP_129S1SvImJ_P0036188 Fam208b protein_coding protein_coding MGP_129S1SvImJ_T0012947.1 MGP_129S1SvImJ_G0011036.1 mouse_genomes_project 13 70292702 70293113 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012946.1 MGP_129S1SvImJ_G0011035.1 mouse_genomes_project 13 70058230 70058518 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100633.1 MGP_129S1SvImJ_G0038700.1 mouse_genomes_project 13 45784557 45784686 + Gm24769 snoRNA snoRNA MGP_129S1SvImJ_T0003456.1 MGP_129S1SvImJ_G0003171.1 mouse_genomes_project 13 19333970 19334850 + Gm11290 antisense antisense MGP_129S1SvImJ_T0003457.1 MGP_129S1SvImJ_G0003171.1 mouse_genomes_project 13 19333970 19334872 + Gm11290 antisense antisense MGP_129S1SvImJ_T0038076.1 MGP_129S1SvImJ_G0020906.1 mouse_genomes_project 13 106295798 106323644 - MGP_129S1SvImJ_P0038076 Ppwd1 protein_coding protein_coding MGP_129S1SvImJ_T0038077.1 MGP_129S1SvImJ_G0020906.1 mouse_genomes_project 13 106296172 106323625 - MGP_129S1SvImJ_P0038077 Ppwd1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0036321.1 MGP_129S1SvImJ_G0020237.1 mouse_genomes_project 13 10733822 10757939 + Gng4 protein_coding processed_transcript MGP_129S1SvImJ_T0036322.1 MGP_129S1SvImJ_G0020237.1 mouse_genomes_project 13 10734103 10781014 + MGP_129S1SvImJ_P0036322 Gng4 protein_coding protein_coding MGP_129S1SvImJ_T0012898.1 MGP_129S1SvImJ_G0010987.1 mouse_genomes_project 13 20702569 20702717 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102202.1 MGP_129S1SvImJ_G0040036.1 mouse_genomes_project 13 20179317 20180991 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0036617.1 MGP_129S1SvImJ_G0020392.1 mouse_genomes_project 13 24815298 24822291 + MGP_129S1SvImJ_P0036617 Prl3c1 protein_coding protein_coding MGP_129S1SvImJ_T0036618.1 MGP_129S1SvImJ_G0020392.1 mouse_genomes_project 13 24817444 24822291 + MGP_129S1SvImJ_P0036618 Prl3c1 protein_coding protein_coding MGP_129S1SvImJ_T0036619.1 MGP_129S1SvImJ_G0020392.1 mouse_genomes_project 13 24817894 24822154 + MGP_129S1SvImJ_P0036619 Prl3c1 protein_coding protein_coding MGP_129S1SvImJ_T0038271.1 MGP_129S1SvImJ_G0020981.1 mouse_genomes_project 13 122802460 122803684 + MGP_129S1SvImJ_P0038271 protein_coding protein_coding MGP_129S1SvImJ_T0038273.1 MGP_129S1SvImJ_G0020981.1 mouse_genomes_project 13 122803229 122803625 + MGP_129S1SvImJ_P0038273 protein_coding protein_coding MGP_129S1SvImJ_T0037831.1 MGP_129S1SvImJ_G0020825.1 mouse_genomes_project 13 94768107 94844320 - MGP_129S1SvImJ_P0037831 Jmy protein_coding protein_coding MGP_129S1SvImJ_T0037480.1 MGP_129S1SvImJ_G0020706.1 mouse_genomes_project 13 67455249 67477112 - MGP_129S1SvImJ_P0037480 Zfp595 protein_coding protein_coding MGP_129S1SvImJ_T0037481.1 MGP_129S1SvImJ_G0020706.1 mouse_genomes_project 13 67455972 67477125 - MGP_129S1SvImJ_P0037481 Zfp595 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037482.1 MGP_129S1SvImJ_G0020706.1 mouse_genomes_project 13 67456684 67477101 - MGP_129S1SvImJ_P0037482 Zfp595 protein_coding protein_coding MGP_129S1SvImJ_T0037483.1 MGP_129S1SvImJ_G0020706.1 mouse_genomes_project 13 67456992 67477065 - MGP_129S1SvImJ_P0037483 Zfp595 protein_coding protein_coding MGP_129S1SvImJ_T0012950.1 MGP_129S1SvImJ_G0011039.1 mouse_genomes_project 13 74841731 74842070 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038025.1 MGP_129S1SvImJ_G0020897.1 mouse_genomes_project 13 103666649 103761103 - MGP_129S1SvImJ_P0038025 Pik3r1 protein_coding protein_coding MGP_129S1SvImJ_T0038026.1 MGP_129S1SvImJ_G0020897.1 mouse_genomes_project 13 103669750 103679042 - MGP_129S1SvImJ_P0038026 Pik3r1 protein_coding protein_coding MGP_129S1SvImJ_T0038027.1 MGP_129S1SvImJ_G0020897.1 mouse_genomes_project 13 103673669 103678988 - MGP_129S1SvImJ_P0038027 Pik3r1 protein_coding protein_coding MGP_129S1SvImJ_T0038028.1 MGP_129S1SvImJ_G0020897.1 mouse_genomes_project 13 103675127 103681014 - MGP_129S1SvImJ_P0038028 Pik3r1 protein_coding protein_coding MGP_129S1SvImJ_T0038029.1 MGP_129S1SvImJ_G0020897.1 mouse_genomes_project 13 103676546 103678755 - Pik3r1 protein_coding retained_intron MGP_129S1SvImJ_T0038030.1 MGP_129S1SvImJ_G0020897.1 mouse_genomes_project 13 103687862 103688518 - Pik3r1 protein_coding retained_intron MGP_129S1SvImJ_T0038031.1 MGP_129S1SvImJ_G0020897.1 mouse_genomes_project 13 103747605 103761099 - Pik3r1 protein_coding retained_intron MGP_129S1SvImJ_T0036788.1 MGP_129S1SvImJ_G0020468.1 mouse_genomes_project 13 36318697 36353114 - MGP_129S1SvImJ_P0036788 Cage1 protein_coding protein_coding MGP_129S1SvImJ_T0036789.1 MGP_129S1SvImJ_G0020468.1 mouse_genomes_project 13 36318699 36353128 - MGP_129S1SvImJ_P0036789 Cage1 protein_coding protein_coding MGP_129S1SvImJ_T0036790.1 MGP_129S1SvImJ_G0020468.1 mouse_genomes_project 13 36334582 36353259 - MGP_129S1SvImJ_P0036790 Cage1 protein_coding protein_coding MGP_129S1SvImJ_T0036791.1 MGP_129S1SvImJ_G0020468.1 mouse_genomes_project 13 36337785 36353128 - MGP_129S1SvImJ_P0036791 Cage1 protein_coding protein_coding MGP_129S1SvImJ_T0036325.1 MGP_129S1SvImJ_G0020240.1 mouse_genomes_project 13 10966338 11002937 - MGP_129S1SvImJ_P0036325 Tbce protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036326.1 MGP_129S1SvImJ_G0020240.1 mouse_genomes_project 13 10966340 10973922 - Tbce protein_coding retained_intron MGP_129S1SvImJ_T0036327.1 MGP_129S1SvImJ_G0020240.1 mouse_genomes_project 13 10966340 10969987 - Tbce protein_coding retained_intron MGP_129S1SvImJ_T0036328.1 MGP_129S1SvImJ_G0020240.1 mouse_genomes_project 13 10966341 11002996 - MGP_129S1SvImJ_P0036328 Tbce protein_coding protein_coding MGP_129S1SvImJ_T0036329.1 MGP_129S1SvImJ_G0020240.1 mouse_genomes_project 13 10966342 11002996 - MGP_129S1SvImJ_P0036329 Tbce protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036330.1 MGP_129S1SvImJ_G0020240.1 mouse_genomes_project 13 10971453 11002979 - Tbce protein_coding retained_intron MGP_129S1SvImJ_T0036331.1 MGP_129S1SvImJ_G0020240.1 mouse_genomes_project 13 10973606 10978266 - Tbce protein_coding retained_intron MGP_129S1SvImJ_T0036332.1 MGP_129S1SvImJ_G0020240.1 mouse_genomes_project 13 10973644 10977473 - Tbce protein_coding retained_intron MGP_129S1SvImJ_T0036333.1 MGP_129S1SvImJ_G0020240.1 mouse_genomes_project 13 10973651 10978259 - Tbce protein_coding retained_intron MGP_129S1SvImJ_T0036334.1 MGP_129S1SvImJ_G0020240.1 mouse_genomes_project 13 10973659 10977925 - Tbce protein_coding processed_transcript MGP_129S1SvImJ_T0036335.1 MGP_129S1SvImJ_G0020240.1 mouse_genomes_project 13 10978806 11002970 - Tbce protein_coding retained_intron MGP_129S1SvImJ_T0036336.1 MGP_129S1SvImJ_G0020240.1 mouse_genomes_project 13 10982731 11002954 - Tbce protein_coding retained_intron MGP_129S1SvImJ_T0036337.1 MGP_129S1SvImJ_G0020240.1 mouse_genomes_project 13 10987645 11002975 - Tbce protein_coding retained_intron MGP_129S1SvImJ_T0006526.1 MGP_129S1SvImJ_G0005423.1 mouse_genomes_project 13 20678889 20683421 + 4933404K08Rik lincRNA lincRNA MGP_129S1SvImJ_T0036240.1 MGP_129S1SvImJ_G0020216.1 mouse_genomes_project 13 4640477 4652023 - MGP_129S1SvImJ_P0036240 protein_coding protein_coding MGP_129S1SvImJ_T0006573.1 MGP_129S1SvImJ_G0005457.1 mouse_genomes_project 13 44705965 44707221 + 5033430I15Rik lincRNA lincRNA MGP_129S1SvImJ_T0006574.1 MGP_129S1SvImJ_G0005457.1 mouse_genomes_project 13 44706063 44706890 + 5033430I15Rik lincRNA lincRNA MGP_129S1SvImJ_T0037929.1 MGP_129S1SvImJ_G0020862.1 mouse_genomes_project 13 99944602 99960749 - MGP_129S1SvImJ_P0037929 Utp15 protein_coding protein_coding MGP_129S1SvImJ_T0036438.1 MGP_129S1SvImJ_G0020287.1 mouse_genomes_project 13 18909479 18913163 - MGP_129S1SvImJ_P0036438 Olfr11 protein_coding protein_coding MGP_129S1SvImJ_T0036439.1 MGP_129S1SvImJ_G0020287.1 mouse_genomes_project 13 18909479 18910421 - MGP_129S1SvImJ_P0036439 Olfr11 protein_coding protein_coding MGP_129S1SvImJ_T0012938.1 MGP_129S1SvImJ_G0011027.1 mouse_genomes_project 13 64533444 64534820 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036487.1 MGP_129S1SvImJ_G0020323.1 mouse_genomes_project 13 19887770 19888679 + MGP_129S1SvImJ_P0036487 Vmn1r204 protein_coding protein_coding MGP_129S1SvImJ_T0012935.1 MGP_129S1SvImJ_G0011024.1 mouse_genomes_project 13 61917222 62035802 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100653.1 MGP_129S1SvImJ_G0038720.1 mouse_genomes_project 13 93016468 93016596 + Gm22778 snoRNA snoRNA MGP_129S1SvImJ_T0036885.1 MGP_129S1SvImJ_G0020506.1 mouse_genomes_project 13 43761596 43764531 + MGP_129S1SvImJ_P0036885 protein_coding protein_coding MGP_129S1SvImJ_T0037560.1 MGP_129S1SvImJ_G0020746.1 mouse_genomes_project 13 73987060 74032682 + MGP_129S1SvImJ_P0037560 Slc6a3 protein_coding protein_coding MGP_129S1SvImJ_T0006536.1 MGP_129S1SvImJ_G0005431.1 mouse_genomes_project 13 26733385 26743058 + Gm26735 lincRNA lincRNA MGP_129S1SvImJ_T0036601.1 MGP_129S1SvImJ_G0020384.1 mouse_genomes_project 13 22408673 22442398 - MGP_129S1SvImJ_P0036601 Aldh5a1 protein_coding protein_coding MGP_129S1SvImJ_T0102204.1 MGP_129S1SvImJ_G0040038.1 mouse_genomes_project 13 20250357 20250649 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0037610.1 MGP_129S1SvImJ_G0020768.1 mouse_genomes_project 13 75169591 75222247 + MGP_129S1SvImJ_P0037610 Erap1 protein_coding protein_coding MGP_129S1SvImJ_T0036671.1 MGP_129S1SvImJ_G0020417.1 mouse_genomes_project 13 28700029 28840236 - MGP_129S1SvImJ_P0036671 Exoc2 protein_coding protein_coding MGP_129S1SvImJ_T0036672.1 MGP_129S1SvImJ_G0020417.1 mouse_genomes_project 13 28700029 28869068 - MGP_129S1SvImJ_P0036672 Exoc2 protein_coding protein_coding MGP_129S1SvImJ_T0038118.1 MGP_129S1SvImJ_G0020923.1 mouse_genomes_project 13 110337315 110453682 - MGP_129S1SvImJ_P0038118 Ndufaf2 protein_coding protein_coding MGP_129S1SvImJ_T0099381.1 MGP_129S1SvImJ_G0037448.1 mouse_genomes_project 13 122758695 122758803 + Gm23308 snRNA snRNA MGP_129S1SvImJ_T0036502.1 MGP_129S1SvImJ_G0020338.1 mouse_genomes_project 13 20622534 20623881 - MGP_129S1SvImJ_P0036502 protein_coding protein_coding MGP_129S1SvImJ_T0036521.1 MGP_129S1SvImJ_G0020351.1 mouse_genomes_project 13 20996420 20999900 + MGP_129S1SvImJ_P0036521 protein_coding protein_coding MGP_129S1SvImJ_T0037404.1 MGP_129S1SvImJ_G0020671.1 mouse_genomes_project 13 63801432 63844798 + MGP_129S1SvImJ_P0037404 Ercc6l2 protein_coding protein_coding MGP_129S1SvImJ_T0037405.1 MGP_129S1SvImJ_G0020671.1 mouse_genomes_project 13 63801494 63871068 + MGP_129S1SvImJ_P0037405 Ercc6l2 protein_coding protein_coding MGP_129S1SvImJ_T0037406.1 MGP_129S1SvImJ_G0020671.1 mouse_genomes_project 13 63801526 63823983 + Ercc6l2 protein_coding processed_transcript MGP_129S1SvImJ_T0037407.1 MGP_129S1SvImJ_G0020671.1 mouse_genomes_project 13 63801526 63868102 + MGP_129S1SvImJ_P0037407 Ercc6l2 protein_coding protein_coding MGP_129S1SvImJ_T0037408.1 MGP_129S1SvImJ_G0020671.1 mouse_genomes_project 13 63801526 63844763 + MGP_129S1SvImJ_P0037408 Ercc6l2 protein_coding protein_coding MGP_129S1SvImJ_T0037409.1 MGP_129S1SvImJ_G0020671.1 mouse_genomes_project 13 63806868 63867746 + MGP_129S1SvImJ_P0037409 Ercc6l2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037410.1 MGP_129S1SvImJ_G0020671.1 mouse_genomes_project 13 63806870 63868123 + MGP_129S1SvImJ_P0037410 Ercc6l2 protein_coding protein_coding MGP_129S1SvImJ_T0037411.1 MGP_129S1SvImJ_G0020671.1 mouse_genomes_project 13 63806870 63849330 + MGP_129S1SvImJ_P0037411 Ercc6l2 protein_coding protein_coding MGP_129S1SvImJ_T0037412.1 MGP_129S1SvImJ_G0020671.1 mouse_genomes_project 13 63807193 63828646 + MGP_129S1SvImJ_P0037412 Ercc6l2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037413.1 MGP_129S1SvImJ_G0020671.1 mouse_genomes_project 13 63868977 63870975 + Ercc6l2 protein_coding processed_transcript MGP_129S1SvImJ_T0037414.1 MGP_129S1SvImJ_G0020671.1 mouse_genomes_project 13 63870932 63901321 + MGP_129S1SvImJ_P0037414 Ercc6l2 protein_coding protein_coding MGP_129S1SvImJ_T0037006.1 MGP_129S1SvImJ_G0020549.1 mouse_genomes_project 13 50605136 50619295 + MGP_129S1SvImJ_P0037006 S1pr3 protein_coding protein_coding MGP_129S1SvImJ_T0037278.1 MGP_129S1SvImJ_G0020629.1 mouse_genomes_project 13 57803110 57842575 - MGP_129S1SvImJ_P0037278 Ubqln1 protein_coding protein_coding MGP_129S1SvImJ_T0037279.1 MGP_129S1SvImJ_G0020629.1 mouse_genomes_project 13 57803110 57842575 - MGP_129S1SvImJ_P0037279 Ubqln1 protein_coding protein_coding MGP_129S1SvImJ_T0037713.1 MGP_129S1SvImJ_G0020794.1 mouse_genomes_project 13 86051589 86052105 - MGP_129S1SvImJ_P0037713 Gm4076 protein_coding protein_coding MGP_129S1SvImJ_T0036660.1 MGP_129S1SvImJ_G0020412.1 mouse_genomes_project 13 27989457 28104153 + MGP_129S1SvImJ_P0036660 Mboat1 protein_coding protein_coding MGP_129S1SvImJ_T0036661.1 MGP_129S1SvImJ_G0020412.1 mouse_genomes_project 13 27989490 28089207 + MGP_129S1SvImJ_P0036661 Mboat1 protein_coding protein_coding MGP_129S1SvImJ_T0036662.1 MGP_129S1SvImJ_G0020412.1 mouse_genomes_project 13 27989505 28016485 + Mboat1 protein_coding processed_transcript MGP_129S1SvImJ_T0038241.1 MGP_129S1SvImJ_G0020968.1 mouse_genomes_project 13 121667436 121793029 + Fgf10 protein_coding processed_transcript MGP_129S1SvImJ_T0038242.1 MGP_129S1SvImJ_G0020968.1 mouse_genomes_project 13 121667469 121785251 + Fgf10 protein_coding processed_transcript MGP_129S1SvImJ_T0038243.1 MGP_129S1SvImJ_G0020968.1 mouse_genomes_project 13 121713684 121795770 + MGP_129S1SvImJ_P0038243 Fgf10 protein_coding protein_coding MGP_129S1SvImJ_T0038000.1 MGP_129S1SvImJ_G0020887.1 mouse_genomes_project 13 102516167 102537821 - MGP_129S1SvImJ_P0038000 Marveld2 protein_coding protein_coding MGP_129S1SvImJ_T0038001.1 MGP_129S1SvImJ_G0020887.1 mouse_genomes_project 13 102516167 102537794 - MGP_129S1SvImJ_P0038001 Marveld2 protein_coding protein_coding MGP_129S1SvImJ_T0038002.1 MGP_129S1SvImJ_G0020887.1 mouse_genomes_project 13 102517440 102537761 - MGP_129S1SvImJ_P0038002 Marveld2 protein_coding protein_coding MGP_129S1SvImJ_T0037486.1 MGP_129S1SvImJ_G0020708.1 mouse_genomes_project 13 67485286 67506110 - MGP_129S1SvImJ_P0037486 Zfp953 protein_coding protein_coding MGP_129S1SvImJ_T0036531.1 MGP_129S1SvImJ_G0020359.1 mouse_genomes_project 13 21137480 21145948 - MGP_129S1SvImJ_P0036531 Hfe protein_coding protein_coding MGP_129S1SvImJ_T0036532.1 MGP_129S1SvImJ_G0020359.1 mouse_genomes_project 13 21139639 21145948 - MGP_129S1SvImJ_P0036532 Hfe protein_coding protein_coding MGP_129S1SvImJ_T0036533.1 MGP_129S1SvImJ_G0020359.1 mouse_genomes_project 13 21139639 21145948 - MGP_129S1SvImJ_P0036533 Hfe protein_coding protein_coding MGP_129S1SvImJ_T0037609.1 MGP_129S1SvImJ_G0020767.1 mouse_genomes_project 13 75132510 75144045 - MGP_129S1SvImJ_P0037609 Zfp825 protein_coding protein_coding MGP_129S1SvImJ_T0036217.1 MGP_129S1SvImJ_G0020209.1 mouse_genomes_project 13 1052181 1065267 + MGP_129S1SvImJ_P0036217 Akr1c21 protein_coding protein_coding MGP_129S1SvImJ_T0036218.1 MGP_129S1SvImJ_G0020209.1 mouse_genomes_project 13 1055263 1059627 + Akr1c21 protein_coding retained_intron MGP_129S1SvImJ_T0003455.1 MGP_129S1SvImJ_G0003170.1 mouse_genomes_project 13 19250713 19256076 - Gm11280 antisense antisense MGP_129S1SvImJ_T0009957.1 MGP_129S1SvImJ_G0008073.1 mouse_genomes_project 13 57949066 57949172 - Mir6369 miRNA miRNA MGP_129S1SvImJ_T0036857.1 MGP_129S1SvImJ_G0020496.1 mouse_genomes_project 13 41733839 41754318 - MGP_129S1SvImJ_P0036857 Tbc1d7 protein_coding protein_coding MGP_129S1SvImJ_T0036858.1 MGP_129S1SvImJ_G0020496.1 mouse_genomes_project 13 41733839 41754318 - MGP_129S1SvImJ_P0036858 Tbc1d7 protein_coding protein_coding MGP_129S1SvImJ_T0038005.1 MGP_129S1SvImJ_G0020889.1 mouse_genomes_project 13 102578236 102596603 + MGP_129S1SvImJ_P0038005 protein_coding protein_coding MGP_129S1SvImJ_T0038006.1 MGP_129S1SvImJ_G0020889.1 mouse_genomes_project 13 102578619 102581816 + protein_coding retained_intron MGP_129S1SvImJ_T0038007.1 MGP_129S1SvImJ_G0020889.1 mouse_genomes_project 13 102578883 102581894 + protein_coding retained_intron MGP_129S1SvImJ_T0100619.1 MGP_129S1SvImJ_G0038686.1 mouse_genomes_project 13 5564801 5564915 + snoRNA snoRNA MGP_129S1SvImJ_T0037818.1 MGP_129S1SvImJ_G0020823.1 mouse_genomes_project 13 94481270 94529133 - MGP_129S1SvImJ_P0037818 Papd4 protein_coding protein_coding MGP_129S1SvImJ_T0000922.1 MGP_129S1SvImJ_G0000854.1 mouse_genomes_project 13 103403776 103404260 - TEC TEC MGP_129S1SvImJ_T0036643.1 MGP_129S1SvImJ_G0020407.1 mouse_genomes_project 13 25741028 25748365 + MGP_129S1SvImJ_P0036643 Prl4a1 protein_coding protein_coding MGP_129S1SvImJ_T0036732.1 MGP_129S1SvImJ_G0020445.1 mouse_genomes_project 13 32105300 32138305 + MGP_129S1SvImJ_P0036732 Ripk1 protein_coding protein_coding MGP_129S1SvImJ_T0036733.1 MGP_129S1SvImJ_G0020445.1 mouse_genomes_project 13 32105337 32117624 + Ripk1 protein_coding retained_intron MGP_129S1SvImJ_T0036734.1 MGP_129S1SvImJ_G0020445.1 mouse_genomes_project 13 32105811 32139798 + MGP_129S1SvImJ_P0036734 Ripk1 protein_coding protein_coding MGP_129S1SvImJ_T0036735.1 MGP_129S1SvImJ_G0020445.1 mouse_genomes_project 13 32112635 32137410 + MGP_129S1SvImJ_P0036735 Ripk1 protein_coding protein_coding MGP_129S1SvImJ_T0017390.1 MGP_129S1SvImJ_G0015256.1 mouse_genomes_project 13 39429953 39478505 - A730081D07Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0037804.1 MGP_129S1SvImJ_G0020815.1 mouse_genomes_project 13 93724422 93741053 + MGP_129S1SvImJ_P0037804 Ankrd34b protein_coding protein_coding MGP_129S1SvImJ_T0037805.1 MGP_129S1SvImJ_G0020815.1 mouse_genomes_project 13 93724867 93736842 + MGP_129S1SvImJ_P0037805 Ankrd34b protein_coding protein_coding MGP_129S1SvImJ_T0037806.1 MGP_129S1SvImJ_G0020815.1 mouse_genomes_project 13 93725184 93740325 + MGP_129S1SvImJ_P0037806 Ankrd34b protein_coding protein_coding MGP_129S1SvImJ_T0036509.1 MGP_129S1SvImJ_G0020342.1 mouse_genomes_project 13 20863266 20872173 - MGP_129S1SvImJ_P0036509 Btn1a1 protein_coding protein_coding MGP_129S1SvImJ_T0036510.1 MGP_129S1SvImJ_G0020342.1 mouse_genomes_project 13 20870045 20872199 - MGP_129S1SvImJ_P0036510 Btn1a1 protein_coding protein_coding MGP_129S1SvImJ_T0036279.1 MGP_129S1SvImJ_G0020225.1 mouse_genomes_project 13 6340035 6423304 - MGP_129S1SvImJ_P0036279 Zmynd11 protein_coding protein_coding MGP_129S1SvImJ_T0036280.1 MGP_129S1SvImJ_G0020225.1 mouse_genomes_project 13 6340035 6422414 - MGP_129S1SvImJ_P0036280 Zmynd11 protein_coding protein_coding MGP_129S1SvImJ_T0036281.1 MGP_129S1SvImJ_G0020225.1 mouse_genomes_project 13 6340035 6422479 - MGP_129S1SvImJ_P0036281 Zmynd11 protein_coding protein_coding MGP_129S1SvImJ_T0036282.1 MGP_129S1SvImJ_G0020225.1 mouse_genomes_project 13 6340037 6423150 - MGP_129S1SvImJ_P0036282 Zmynd11 protein_coding protein_coding MGP_129S1SvImJ_T0036283.1 MGP_129S1SvImJ_G0020225.1 mouse_genomes_project 13 6340040 6346486 - Zmynd11 protein_coding retained_intron MGP_129S1SvImJ_T0036284.1 MGP_129S1SvImJ_G0020225.1 mouse_genomes_project 13 6340040 6422461 - MGP_129S1SvImJ_P0036284 Zmynd11 protein_coding protein_coding MGP_129S1SvImJ_T0036285.1 MGP_129S1SvImJ_G0020225.1 mouse_genomes_project 13 6340294 6422946 - MGP_129S1SvImJ_P0036285 Zmynd11 protein_coding protein_coding MGP_129S1SvImJ_T0036286.1 MGP_129S1SvImJ_G0020225.1 mouse_genomes_project 13 6342064 6376865 - MGP_129S1SvImJ_P0036286 Zmynd11 protein_coding protein_coding MGP_129S1SvImJ_T0036287.1 MGP_129S1SvImJ_G0020225.1 mouse_genomes_project 13 6344351 6345723 - Zmynd11 protein_coding retained_intron MGP_129S1SvImJ_T0036288.1 MGP_129S1SvImJ_G0020225.1 mouse_genomes_project 13 6348683 6351350 - Zmynd11 protein_coding retained_intron MGP_129S1SvImJ_T0036289.1 MGP_129S1SvImJ_G0020225.1 mouse_genomes_project 13 6349495 6423260 - MGP_129S1SvImJ_P0036289 Zmynd11 protein_coding protein_coding MGP_129S1SvImJ_T0036290.1 MGP_129S1SvImJ_G0020225.1 mouse_genomes_project 13 6350341 6422435 - MGP_129S1SvImJ_P0036290 Zmynd11 protein_coding protein_coding MGP_129S1SvImJ_T0036291.1 MGP_129S1SvImJ_G0020225.1 mouse_genomes_project 13 6352841 6423311 - MGP_129S1SvImJ_P0036291 Zmynd11 protein_coding protein_coding MGP_129S1SvImJ_T0036292.1 MGP_129S1SvImJ_G0020225.1 mouse_genomes_project 13 6352841 6422927 - MGP_129S1SvImJ_P0036292 Zmynd11 protein_coding protein_coding MGP_129S1SvImJ_T0036293.1 MGP_129S1SvImJ_G0020225.1 mouse_genomes_project 13 6352860 6393475 - Zmynd11 protein_coding processed_transcript MGP_129S1SvImJ_T0036294.1 MGP_129S1SvImJ_G0020225.1 mouse_genomes_project 13 6352897 6393117 - Zmynd11 protein_coding processed_transcript MGP_129S1SvImJ_T0036295.1 MGP_129S1SvImJ_G0020225.1 mouse_genomes_project 13 6352900 6422409 - MGP_129S1SvImJ_P0036295 Zmynd11 protein_coding protein_coding MGP_129S1SvImJ_T0036296.1 MGP_129S1SvImJ_G0020225.1 mouse_genomes_project 13 6353855 6393583 - MGP_129S1SvImJ_P0036296 Zmynd11 protein_coding protein_coding MGP_129S1SvImJ_T0036297.1 MGP_129S1SvImJ_G0020225.1 mouse_genomes_project 13 6366113 6422445 - MGP_129S1SvImJ_P0036297 Zmynd11 protein_coding protein_coding MGP_129S1SvImJ_T0036683.1 MGP_129S1SvImJ_G0020425.1 mouse_genomes_project 13 30698821 30784121 - MGP_129S1SvImJ_P0036683 Mylk4 protein_coding protein_coding MGP_129S1SvImJ_T0036684.1 MGP_129S1SvImJ_G0020425.1 mouse_genomes_project 13 30704912 30784058 - MGP_129S1SvImJ_P0036684 Mylk4 protein_coding protein_coding MGP_129S1SvImJ_T0036685.1 MGP_129S1SvImJ_G0020425.1 mouse_genomes_project 13 30709095 30739110 - MGP_129S1SvImJ_P0036685 Mylk4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0036686.1 MGP_129S1SvImJ_G0020425.1 mouse_genomes_project 13 30768857 30786296 - Mylk4 protein_coding processed_transcript MGP_129S1SvImJ_T0100628.1 MGP_129S1SvImJ_G0038695.1 mouse_genomes_project 13 29270380 29270495 + Gm22330 snoRNA snoRNA MGP_129S1SvImJ_T0012943.1 MGP_129S1SvImJ_G0011032.1 mouse_genomes_project 13 67993124 67993978 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098486.1 MGP_129S1SvImJ_G0036571.1 mouse_genomes_project 13 45288364 45288442 + Gm24915 rRNA rRNA MGP_129S1SvImJ_T0098484.1 MGP_129S1SvImJ_G0036569.1 mouse_genomes_project 13 11092331 11092444 - n-R5s52 rRNA rRNA MGP_129S1SvImJ_T0037577.1 MGP_129S1SvImJ_G0020754.1 mouse_genomes_project 13 74427010 74450392 + MGP_129S1SvImJ_P0037577 Brd9 protein_coding protein_coding MGP_129S1SvImJ_T0037578.1 MGP_129S1SvImJ_G0020754.1 mouse_genomes_project 13 74427029 74450390 + MGP_129S1SvImJ_P0037578 Brd9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0037611.1 MGP_129S1SvImJ_G0020769.1 mouse_genomes_project 13 75225896 75333373 - MGP_129S1SvImJ_P0037611 Cast protein_coding unknown_likely_coding MGP_129S1SvImJ_T0037612.1 MGP_129S1SvImJ_G0020769.1 mouse_genomes_project 13 75225905 75332784 - MGP_129S1SvImJ_P0037612 Cast protein_coding protein_coding MGP_129S1SvImJ_T0012879.1 MGP_129S1SvImJ_G0010968.1 mouse_genomes_project 13 8653759 8654745 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006566.1 MGP_129S1SvImJ_G0005452.1 mouse_genomes_project 13 39851137 39862914 + Gm26877 lincRNA lincRNA MGP_129S1SvImJ_T0037185.1 MGP_129S1SvImJ_G0020596.1 mouse_genomes_project 13 54898250 54911333 - MGP_129S1SvImJ_P0037185 F12 protein_coding protein_coding MGP_129S1SvImJ_T0037186.1 MGP_129S1SvImJ_G0020596.1 mouse_genomes_project 13 54898356 54911319 - MGP_129S1SvImJ_P0037186 F12 protein_coding protein_coding MGP_129S1SvImJ_T0003519.1 MGP_129S1SvImJ_G0003209.1 mouse_genomes_project 13 100016364 100017247 + antisense antisense MGP_129S1SvImJ_T0003520.1 MGP_129S1SvImJ_G0003209.1 mouse_genomes_project 13 100017011 100022885 + antisense antisense MGP_129S1SvImJ_T0003521.1 MGP_129S1SvImJ_G0003209.1 mouse_genomes_project 13 100017058 100028740 + antisense antisense MGP_129S1SvImJ_T0003522.1 MGP_129S1SvImJ_G0003209.1 mouse_genomes_project 13 100019551 100022391 + antisense antisense MGP_129S1SvImJ_T0036424.1 MGP_129S1SvImJ_G0020277.1 mouse_genomes_project 13 18732023 18733486 - MGP_129S1SvImJ_P0036424 Nkapl protein_coding protein_coding MGP_129S1SvImJ_T0038093.1 MGP_129S1SvImJ_G0020914.1 mouse_genomes_project 13 107267416 107417646 - MGP_129S1SvImJ_P0038093 Rnf180 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0038094.1 MGP_129S1SvImJ_G0020914.1 mouse_genomes_project 13 107287467 107417646 - MGP_129S1SvImJ_P0038094 Rnf180 protein_coding protein_coding MGP_129S1SvImJ_T0037187.1 MGP_129S1SvImJ_G0020597.1 mouse_genomes_project 13 54930482 54944728 + MGP_129S1SvImJ_P0037187 Grk6 protein_coding protein_coding MGP_129S1SvImJ_T0037188.1 MGP_129S1SvImJ_G0020597.1 mouse_genomes_project 13 54930482 54946076 + MGP_129S1SvImJ_P0037188 Grk6 protein_coding protein_coding MGP_129S1SvImJ_T0037189.1 MGP_129S1SvImJ_G0020597.1 mouse_genomes_project 13 54930657 54944988 + MGP_129S1SvImJ_P0037189 Grk6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0037056.1 MGP_129S1SvImJ_G0020562.1 mouse_genomes_project 13 52804751 52810893 - MGP_129S1SvImJ_P0037056 Msx2 protein_coding protein_coding MGP_129S1SvImJ_T0037057.1 MGP_129S1SvImJ_G0020562.1 mouse_genomes_project 13 52809324 52810893 - Msx2 protein_coding retained_intron MGP_129S1SvImJ_T0006623.1 MGP_129S1SvImJ_G0005488.1 mouse_genomes_project 13 84763623 84803852 + 2810049E08Rik lincRNA lincRNA MGP_129S1SvImJ_T0012967.1 MGP_129S1SvImJ_G0011056.1 mouse_genomes_project 13 95089029 95089358 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100638.1 MGP_129S1SvImJ_G0038705.1 mouse_genomes_project 13 55695768 55695891 + Gm25148 snoRNA snoRNA MGP_129S1SvImJ_T0006597.1 MGP_129S1SvImJ_G0005471.1 mouse_genomes_project 13 55757989 55780968 - 4930550C17Rik lincRNA lincRNA MGP_129S1SvImJ_T0099371.1 MGP_129S1SvImJ_G0037438.1 mouse_genomes_project 13 80842850 80842978 + Gm24635 snRNA snRNA MGP_129S1SvImJ_T0036798.1 MGP_129S1SvImJ_G0020472.1 mouse_genomes_project 13 36681490 36852595 + MGP_129S1SvImJ_P0036798 Bmp6 protein_coding protein_coding MGP_129S1SvImJ_T0002525.1 MGP_129S1SvImJ_G0002432.1 mouse_genomes_project 13 16502483 16502544 + MGP_129S1SvImJ_P0002525 Trgj4 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0006610.1 MGP_129S1SvImJ_G0005481.1 mouse_genomes_project 13 79928157 79941564 + Gm29318 lincRNA lincRNA MGP_129S1SvImJ_T0037848.1 MGP_129S1SvImJ_G0020833.1 mouse_genomes_project 13 95765569 95985245 + MGP_129S1SvImJ_P0037848 Ap3b1 protein_coding protein_coding MGP_129S1SvImJ_T0100624.1 MGP_129S1SvImJ_G0038691.1 mouse_genomes_project 13 16045772 16045906 + Gm26172 snoRNA snoRNA MGP_129S1SvImJ_T0037892.1 MGP_129S1SvImJ_G0020850.1 mouse_genomes_project 13 98016846 98083570 - MGP_129S1SvImJ_P0037892 Polk protein_coding protein_coding MGP_129S1SvImJ_T0037893.1 MGP_129S1SvImJ_G0020850.1 mouse_genomes_project 13 98018328 98056097 - MGP_129S1SvImJ_P0037893 Polk protein_coding protein_coding MGP_129S1SvImJ_T0036193.1 MGP_129S1SvImJ_G0020196.1 mouse_genomes_project 13 298937 300363 - MGP_129S1SvImJ_P0036193 Calml3 protein_coding protein_coding MGP_129S1SvImJ_T0038117.1 MGP_129S1SvImJ_G0020922.1 mouse_genomes_project 13 110329121 110333876 + MGP_129S1SvImJ_P0038117 Smim15 protein_coding protein_coding MGP_129S1SvImJ_T0036891.1 MGP_129S1SvImJ_G0020509.1 mouse_genomes_project 13 44265790 44704580 - MGP_129S1SvImJ_P0036891 Atxn1 protein_coding protein_coding MGP_129S1SvImJ_T0036892.1 MGP_129S1SvImJ_G0020509.1 mouse_genomes_project 13 44265790 44704580 - MGP_129S1SvImJ_P0036892 Atxn1 protein_coding protein_coding MGP_129S1SvImJ_T0036893.1 MGP_129S1SvImJ_G0020509.1 mouse_genomes_project 13 44265790 44704580 - MGP_129S1SvImJ_P0036893 Atxn1 protein_coding protein_coding MGP_129S1SvImJ_T0006611.1 MGP_129S1SvImJ_G0005482.1 mouse_genomes_project 13 80623473 80807904 - lincRNA lincRNA MGP_129S1SvImJ_T0037115.1 MGP_129S1SvImJ_G0020577.1 mouse_genomes_project 13 54111936 54149823 + MGP_129S1SvImJ_P0037115 Cdhr2 protein_coding protein_coding MGP_129S1SvImJ_T0006637.1 MGP_129S1SvImJ_G0005498.1 mouse_genomes_project 13 100190620 100191482 - Gm29501 lincRNA lincRNA MGP_129S1SvImJ_T0037565.1 MGP_129S1SvImJ_G0020750.1 mouse_genomes_project 13 74151443 74173674 - MGP_129S1SvImJ_P0037565 Slc6a19 protein_coding protein_coding MGP_129S1SvImJ_T0037566.1 MGP_129S1SvImJ_G0020750.1 mouse_genomes_project 13 74151445 74173589 - Slc6a19 protein_coding retained_intron MGP_129S1SvImJ_T0037567.1 MGP_129S1SvImJ_G0020750.1 mouse_genomes_project 13 74151445 74164341 - Slc6a19 protein_coding processed_transcript MGP_129S1SvImJ_T0037568.1 MGP_129S1SvImJ_G0020750.1 mouse_genomes_project 13 74160785 74177759 - Slc6a19 protein_coding processed_transcript MGP_129S1SvImJ_T0037569.1 MGP_129S1SvImJ_G0020750.1 mouse_genomes_project 13 74161268 74164084 - Slc6a19 protein_coding processed_transcript MGP_129S1SvImJ_T0037570.1 MGP_129S1SvImJ_G0020750.1 mouse_genomes_project 13 74161436 74173575 - MGP_129S1SvImJ_P0037570 Slc6a19 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037571.1 MGP_129S1SvImJ_G0020750.1 mouse_genomes_project 13 74161474 74163953 - Slc6a19 protein_coding processed_transcript MGP_129S1SvImJ_T0011383.1 MGP_129S1SvImJ_G0009499.1 mouse_genomes_project 13 110805101 110805356 - Gm27572 misc_RNA misc_RNA MGP_129S1SvImJ_T0037374.1 MGP_129S1SvImJ_G0020667.1 mouse_genomes_project 13 62794577 62817684 - MGP_129S1SvImJ_P0037374 Fbp1 protein_coding protein_coding MGP_129S1SvImJ_T0037375.1 MGP_129S1SvImJ_G0020667.1 mouse_genomes_project 13 62794590 62802525 - MGP_129S1SvImJ_P0037375 Fbp1 protein_coding protein_coding MGP_129S1SvImJ_T0037376.1 MGP_129S1SvImJ_G0020667.1 mouse_genomes_project 13 62802485 62817530 - MGP_129S1SvImJ_P0037376 Fbp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038240.1 MGP_129S1SvImJ_G0020967.1 mouse_genomes_project 13 121353651 121355146 + MGP_129S1SvImJ_P0038240 B430218F22Rik protein_coding protein_coding MGP_129S1SvImJ_T0006624.1 MGP_129S1SvImJ_G0005489.1 mouse_genomes_project 13 84909202 84950011 - Gm17750 lincRNA lincRNA MGP_129S1SvImJ_T0102208.1 MGP_129S1SvImJ_G0040042.1 mouse_genomes_project 13 20490541 20491019 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0009967.1 MGP_129S1SvImJ_G0008083.1 mouse_genomes_project 13 76881988 76882064 - Gm24025 miRNA miRNA MGP_129S1SvImJ_T0036958.1 MGP_129S1SvImJ_G0020531.1 mouse_genomes_project 13 48167771 48180847 - MGP_129S1SvImJ_P0036958 Card19 protein_coding protein_coding MGP_129S1SvImJ_T0038092.1 MGP_129S1SvImJ_G0020913.1 mouse_genomes_project 13 107221210 107260864 + MGP_129S1SvImJ_P0038092 4933425L06Rik protein_coding protein_coding MGP_129S1SvImJ_T0037101.1 MGP_129S1SvImJ_G0020576.1 mouse_genomes_project 13 54090069 54098763 - MGP_129S1SvImJ_P0037101 Rnf44 protein_coding protein_coding MGP_129S1SvImJ_T0037102.1 MGP_129S1SvImJ_G0020576.1 mouse_genomes_project 13 54090072 54104503 - MGP_129S1SvImJ_P0037102 Rnf44 protein_coding protein_coding MGP_129S1SvImJ_T0037103.1 MGP_129S1SvImJ_G0020576.1 mouse_genomes_project 13 54090078 54104572 - MGP_129S1SvImJ_P0037103 Rnf44 protein_coding protein_coding MGP_129S1SvImJ_T0037104.1 MGP_129S1SvImJ_G0020576.1 mouse_genomes_project 13 54090082 54098857 - MGP_129S1SvImJ_P0037104 Rnf44 protein_coding protein_coding MGP_129S1SvImJ_T0037105.1 MGP_129S1SvImJ_G0020576.1 mouse_genomes_project 13 54093315 54094741 - Rnf44 protein_coding retained_intron MGP_129S1SvImJ_T0037106.1 MGP_129S1SvImJ_G0020576.1 mouse_genomes_project 13 54093720 54104511 - MGP_129S1SvImJ_P0037106 Rnf44 protein_coding protein_coding MGP_129S1SvImJ_T0037107.1 MGP_129S1SvImJ_G0020576.1 mouse_genomes_project 13 54093796 54098323 - MGP_129S1SvImJ_P0037107 Rnf44 protein_coding protein_coding MGP_129S1SvImJ_T0037108.1 MGP_129S1SvImJ_G0020576.1 mouse_genomes_project 13 54094153 54095076 - Rnf44 protein_coding retained_intron MGP_129S1SvImJ_T0037109.1 MGP_129S1SvImJ_G0020576.1 mouse_genomes_project 13 54094278 54098869 - MGP_129S1SvImJ_P0037109 Rnf44 protein_coding protein_coding MGP_129S1SvImJ_T0037110.1 MGP_129S1SvImJ_G0020576.1 mouse_genomes_project 13 54094374 54098926 - MGP_129S1SvImJ_P0037110 Rnf44 protein_coding protein_coding MGP_129S1SvImJ_T0037111.1 MGP_129S1SvImJ_G0020576.1 mouse_genomes_project 13 54094632 54104477 - MGP_129S1SvImJ_P0037111 Rnf44 protein_coding protein_coding MGP_129S1SvImJ_T0037112.1 MGP_129S1SvImJ_G0020576.1 mouse_genomes_project 13 54094698 54097922 - Rnf44 protein_coding processed_transcript MGP_129S1SvImJ_T0037113.1 MGP_129S1SvImJ_G0020576.1 mouse_genomes_project 13 54094709 54104515 - Rnf44 protein_coding processed_transcript MGP_129S1SvImJ_T0037114.1 MGP_129S1SvImJ_G0020576.1 mouse_genomes_project 13 54094718 54098942 - MGP_129S1SvImJ_P0037114 Rnf44 protein_coding protein_coding MGP_129S1SvImJ_T0100630.1 MGP_129S1SvImJ_G0038697.1 mouse_genomes_project 13 34884026 34884158 + Gm26395 snoRNA snoRNA MGP_129S1SvImJ_T0099346.1 MGP_129S1SvImJ_G0037413.1 mouse_genomes_project 13 11057529 11057636 + Gm26129 snRNA snRNA MGP_129S1SvImJ_T0099358.1 MGP_129S1SvImJ_G0037425.1 mouse_genomes_project 13 33843076 33843218 + Gm22126 snRNA snRNA MGP_129S1SvImJ_T0100652.1 MGP_129S1SvImJ_G0038719.1 mouse_genomes_project 13 91306078 91306212 + Gm24507 snoRNA snoRNA MGP_129S1SvImJ_T0036554.1 MGP_129S1SvImJ_G0020374.1 mouse_genomes_project 13 21385124 21385514 + MGP_129S1SvImJ_P0036554 Hist1h2aa protein_coding protein_coding MGP_129S1SvImJ_T0036373.1 MGP_129S1SvImJ_G0020257.1 mouse_genomes_project 13 16064967 16253525 + MGP_129S1SvImJ_P0036373 Amph protein_coding protein_coding MGP_129S1SvImJ_T0036374.1 MGP_129S1SvImJ_G0020257.1 mouse_genomes_project 13 16064987 16253528 + MGP_129S1SvImJ_P0036374 Amph protein_coding protein_coding MGP_129S1SvImJ_T0036375.1 MGP_129S1SvImJ_G0020257.1 mouse_genomes_project 13 16065014 16203779 + Amph protein_coding retained_intron MGP_129S1SvImJ_T0036376.1 MGP_129S1SvImJ_G0020257.1 mouse_genomes_project 13 16220225 16222132 + Amph protein_coding retained_intron MGP_129S1SvImJ_T0036377.1 MGP_129S1SvImJ_G0020257.1 mouse_genomes_project 13 16221896 16245096 + Amph protein_coding processed_transcript MGP_129S1SvImJ_T0099368.1 MGP_129S1SvImJ_G0037435.1 mouse_genomes_project 13 60709087 60709186 + Gm24594 snRNA snRNA MGP_129S1SvImJ_T0037711.1 MGP_129S1SvImJ_G0020792.1 mouse_genomes_project 13 85116001 85199386 + MGP_129S1SvImJ_P0037711 Tmem161b protein_coding protein_coding MGP_129S1SvImJ_T0099373.1 MGP_129S1SvImJ_G0037440.1 mouse_genomes_project 13 95346457 95346557 + Gm24737 snRNA snRNA MGP_129S1SvImJ_T0036940.1 MGP_129S1SvImJ_G0020527.1 mouse_genomes_project 13 47738857 47796649 - MGP_129S1SvImJ_P0036940 Phf2 protein_coding protein_coding MGP_129S1SvImJ_T0037969.1 MGP_129S1SvImJ_G0020880.1 mouse_genomes_project 13 101940642 101952292 + MGP_129S1SvImJ_P0037969 Serf1 protein_coding protein_coding MGP_129S1SvImJ_T0037970.1 MGP_129S1SvImJ_G0020880.1 mouse_genomes_project 13 101940715 101949063 + MGP_129S1SvImJ_P0037970 Serf1 protein_coding protein_coding MGP_129S1SvImJ_T0037971.1 MGP_129S1SvImJ_G0020880.1 mouse_genomes_project 13 101940785 101952625 + MGP_129S1SvImJ_P0037971 Serf1 protein_coding protein_coding MGP_129S1SvImJ_T0037972.1 MGP_129S1SvImJ_G0020880.1 mouse_genomes_project 13 101940971 101952292 + MGP_129S1SvImJ_P0037972 Serf1 protein_coding protein_coding MGP_129S1SvImJ_T0037973.1 MGP_129S1SvImJ_G0020880.1 mouse_genomes_project 13 101941026 101952285 + MGP_129S1SvImJ_P0037973 Serf1 protein_coding protein_coding MGP_129S1SvImJ_T0036227.1 MGP_129S1SvImJ_G0020215.1 mouse_genomes_project 13 3153901 3163100 - Pfkp protein_coding retained_intron MGP_129S1SvImJ_T0036228.1 MGP_129S1SvImJ_G0020215.1 mouse_genomes_project 13 3153901 3221366 - MGP_129S1SvImJ_P0036228 Pfkp protein_coding protein_coding MGP_129S1SvImJ_T0036229.1 MGP_129S1SvImJ_G0020215.1 mouse_genomes_project 13 3155315 3221314 - MGP_129S1SvImJ_P0036229 Pfkp protein_coding protein_coding MGP_129S1SvImJ_T0036230.1 MGP_129S1SvImJ_G0020215.1 mouse_genomes_project 13 3155601 3161229 - MGP_129S1SvImJ_P0036230 Pfkp protein_coding protein_coding MGP_129S1SvImJ_T0036231.1 MGP_129S1SvImJ_G0020215.1 mouse_genomes_project 13 3156606 3172894 - MGP_129S1SvImJ_P0036231 Pfkp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036232.1 MGP_129S1SvImJ_G0020215.1 mouse_genomes_project 13 3156606 3172013 - MGP_129S1SvImJ_P0036232 Pfkp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036233.1 MGP_129S1SvImJ_G0020215.1 mouse_genomes_project 13 3160021 3162759 - Pfkp protein_coding retained_intron MGP_129S1SvImJ_T0036234.1 MGP_129S1SvImJ_G0020215.1 mouse_genomes_project 13 3167106 3221314 - Pfkp protein_coding retained_intron MGP_129S1SvImJ_T0036235.1 MGP_129S1SvImJ_G0020215.1 mouse_genomes_project 13 3172428 3176945 - Pfkp protein_coding retained_intron MGP_129S1SvImJ_T0036236.1 MGP_129S1SvImJ_G0020215.1 mouse_genomes_project 13 3176534 3221314 - Pfkp protein_coding retained_intron MGP_129S1SvImJ_T0036237.1 MGP_129S1SvImJ_G0020215.1 mouse_genomes_project 13 3187112 3194647 - Pfkp protein_coding retained_intron MGP_129S1SvImJ_T0036238.1 MGP_129S1SvImJ_G0020215.1 mouse_genomes_project 13 3191655 3221314 - Pfkp protein_coding retained_intron MGP_129S1SvImJ_T0036239.1 MGP_129S1SvImJ_G0020215.1 mouse_genomes_project 13 3193484 3209239 - MGP_129S1SvImJ_P0036239 Pfkp protein_coding protein_coding MGP_129S1SvImJ_T0102197.1 MGP_129S1SvImJ_G0040031.1 mouse_genomes_project 13 19987099 19987824 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0012928.1 MGP_129S1SvImJ_G0011017.1 mouse_genomes_project 13 39242846 39244634 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0037927.1 MGP_129S1SvImJ_G0020860.1 mouse_genomes_project 13 98847077 98860281 + MGP_129S1SvImJ_P0037927 Enc1 protein_coding protein_coding MGP_129S1SvImJ_T0038095.1 MGP_129S1SvImJ_G0020915.1 mouse_genomes_project 13 107595532 107599973 + MGP_129S1SvImJ_P0038095 Htr1a protein_coding protein_coding MGP_129S1SvImJ_T0037535.1 MGP_129S1SvImJ_G0020735.1 mouse_genomes_project 13 70097031 70103245 + MGP_129S1SvImJ_P0037535 Med10 protein_coding protein_coding MGP_129S1SvImJ_T0099353.1 MGP_129S1SvImJ_G0037420.1 mouse_genomes_project 13 21961963 21962066 - Gm22013 snRNA snRNA MGP_129S1SvImJ_T0036811.1 MGP_129S1SvImJ_G0020480.1 mouse_genomes_project 13 39326659 39434431 + MGP_129S1SvImJ_P0036811 Gcnt2 protein_coding protein_coding MGP_129S1SvImJ_T0036812.1 MGP_129S1SvImJ_G0020480.1 mouse_genomes_project 13 39359024 39434431 + MGP_129S1SvImJ_P0036812 Gcnt2 protein_coding protein_coding MGP_129S1SvImJ_T0036813.1 MGP_129S1SvImJ_G0020480.1 mouse_genomes_project 13 39390709 39434431 + MGP_129S1SvImJ_P0036813 Gcnt2 protein_coding protein_coding MGP_129S1SvImJ_T0006660.1 MGP_129S1SvImJ_G0005516.1 mouse_genomes_project 13 122619505 122621013 + 1700074H08Rik lincRNA lincRNA MGP_129S1SvImJ_T0036639.1 MGP_129S1SvImJ_G0020404.1 mouse_genomes_project 13 25289712 25299797 - MGP_129S1SvImJ_P0036639 Prl7a2 protein_coding protein_coding MGP_129S1SvImJ_T0037721.1 MGP_129S1SvImJ_G0020796.1 mouse_genomes_project 13 86142102 86219998 - MGP_129S1SvImJ_P0037721 Rasa1 protein_coding protein_coding MGP_129S1SvImJ_T0037722.1 MGP_129S1SvImJ_G0020796.1 mouse_genomes_project 13 86143137 86145674 - Rasa1 protein_coding retained_intron MGP_129S1SvImJ_T0037723.1 MGP_129S1SvImJ_G0020796.1 mouse_genomes_project 13 86143374 86149026 - Rasa1 protein_coding retained_intron MGP_129S1SvImJ_T0037724.1 MGP_129S1SvImJ_G0020796.1 mouse_genomes_project 13 86148695 86154020 - Rasa1 protein_coding retained_intron MGP_129S1SvImJ_T0037725.1 MGP_129S1SvImJ_G0020796.1 mouse_genomes_project 13 86151526 86153330 - Rasa1 protein_coding retained_intron MGP_129S1SvImJ_T0037726.1 MGP_129S1SvImJ_G0020796.1 mouse_genomes_project 13 86155996 86158371 - Rasa1 protein_coding retained_intron MGP_129S1SvImJ_T0037727.1 MGP_129S1SvImJ_G0020796.1 mouse_genomes_project 13 86156589 86157777 - Rasa1 protein_coding retained_intron MGP_129S1SvImJ_T0037728.1 MGP_129S1SvImJ_G0020796.1 mouse_genomes_project 13 86165509 86174585 - Rasa1 protein_coding retained_intron MGP_129S1SvImJ_T0037729.1 MGP_129S1SvImJ_G0020796.1 mouse_genomes_project 13 86171629 86178253 - Rasa1 protein_coding retained_intron MGP_129S1SvImJ_T0003458.1 MGP_129S1SvImJ_G0003172.1 mouse_genomes_project 13 19853116 20608957 - antisense antisense MGP_129S1SvImJ_T0037782.1 MGP_129S1SvImJ_G0020811.1 mouse_genomes_project 13 93170921 93413521 - MGP_129S1SvImJ_P0037782 Rasgrf2 protein_coding protein_coding MGP_129S1SvImJ_T0037783.1 MGP_129S1SvImJ_G0020811.1 mouse_genomes_project 13 93174951 93413521 - MGP_129S1SvImJ_P0037783 Rasgrf2 protein_coding protein_coding MGP_129S1SvImJ_T0037784.1 MGP_129S1SvImJ_G0020811.1 mouse_genomes_project 13 93256158 93284698 - MGP_129S1SvImJ_P0037784 Rasgrf2 protein_coding protein_coding MGP_129S1SvImJ_T0037785.1 MGP_129S1SvImJ_G0020811.1 mouse_genomes_project 13 93313700 93413683 - MGP_129S1SvImJ_P0037785 Rasgrf2 protein_coding protein_coding MGP_129S1SvImJ_T0037786.1 MGP_129S1SvImJ_G0020811.1 mouse_genomes_project 13 93313700 93316109 - MGP_129S1SvImJ_P0037786 Rasgrf2 protein_coding protein_coding MGP_129S1SvImJ_T0037852.1 MGP_129S1SvImJ_G0020836.1 mouse_genomes_project 13 96416700 96458981 + MGP_129S1SvImJ_P0037852 Wdr41 protein_coding protein_coding MGP_129S1SvImJ_T0037853.1 MGP_129S1SvImJ_G0020836.1 mouse_genomes_project 13 96416704 96467758 + MGP_129S1SvImJ_P0037853 Wdr41 protein_coding protein_coding MGP_129S1SvImJ_T0037854.1 MGP_129S1SvImJ_G0020836.1 mouse_genomes_project 13 96416704 96467757 + MGP_129S1SvImJ_P0037854 Wdr41 protein_coding protein_coding MGP_129S1SvImJ_T0037855.1 MGP_129S1SvImJ_G0020836.1 mouse_genomes_project 13 96416794 96458927 + MGP_129S1SvImJ_P0037855 Wdr41 protein_coding protein_coding MGP_129S1SvImJ_T0037856.1 MGP_129S1SvImJ_G0020836.1 mouse_genomes_project 13 96416794 96458927 + MGP_129S1SvImJ_P0037856 Wdr41 protein_coding protein_coding MGP_129S1SvImJ_T0037857.1 MGP_129S1SvImJ_G0020836.1 mouse_genomes_project 13 96416794 96458927 + MGP_129S1SvImJ_P0037857 Wdr41 protein_coding protein_coding MGP_129S1SvImJ_T0100618.1 MGP_129S1SvImJ_G0038685.1 mouse_genomes_project 13 5564801 5564934 + snoRNA snoRNA MGP_129S1SvImJ_T0038136.1 MGP_129S1SvImJ_G0020927.1 mouse_genomes_project 13 110761068 111182822 + Pde4d protein_coding processed_transcript MGP_129S1SvImJ_T0038137.1 MGP_129S1SvImJ_G0020927.1 mouse_genomes_project 13 110761129 111181837 + Pde4d protein_coding processed_transcript MGP_129S1SvImJ_T0038138.1 MGP_129S1SvImJ_G0020927.1 mouse_genomes_project 13 110964903 112333396 + MGP_129S1SvImJ_P0038138 Pde4d protein_coding protein_coding MGP_129S1SvImJ_T0038139.1 MGP_129S1SvImJ_G0020927.1 mouse_genomes_project 13 111181859 112333266 + MGP_129S1SvImJ_P0038139 Pde4d protein_coding protein_coding MGP_129S1SvImJ_T0038140.1 MGP_129S1SvImJ_G0020927.1 mouse_genomes_project 13 111460094 111687314 + Pde4d protein_coding processed_transcript MGP_129S1SvImJ_T0038141.1 MGP_129S1SvImJ_G0020927.1 mouse_genomes_project 13 111460217 112143715 + Pde4d protein_coding retained_intron MGP_129S1SvImJ_T0038142.1 MGP_129S1SvImJ_G0020927.1 mouse_genomes_project 13 111460454 112333309 + MGP_129S1SvImJ_P0038142 Pde4d protein_coding protein_coding MGP_129S1SvImJ_T0038143.1 MGP_129S1SvImJ_G0020927.1 mouse_genomes_project 13 111612190 112333286 + MGP_129S1SvImJ_P0038143 Pde4d protein_coding protein_coding MGP_129S1SvImJ_T0038144.1 MGP_129S1SvImJ_G0020927.1 mouse_genomes_project 13 111803114 112333286 + MGP_129S1SvImJ_P0038144 Pde4d protein_coding protein_coding MGP_129S1SvImJ_T0038145.1 MGP_129S1SvImJ_G0020927.1 mouse_genomes_project 13 111948749 112333266 + MGP_129S1SvImJ_P0038145 Pde4d protein_coding protein_coding MGP_129S1SvImJ_T0038146.1 MGP_129S1SvImJ_G0020927.1 mouse_genomes_project 13 112001131 112333286 + MGP_129S1SvImJ_P0038146 Pde4d protein_coding protein_coding MGP_129S1SvImJ_T0038147.1 MGP_129S1SvImJ_G0020927.1 mouse_genomes_project 13 112059169 112333396 + MGP_129S1SvImJ_P0038147 Pde4d protein_coding protein_coding MGP_129S1SvImJ_T0038148.1 MGP_129S1SvImJ_G0020927.1 mouse_genomes_project 13 112059189 112143712 + Pde4d protein_coding retained_intron MGP_129S1SvImJ_T0038149.1 MGP_129S1SvImJ_G0020927.1 mouse_genomes_project 13 112130128 112134520 + Pde4d protein_coding processed_transcript MGP_129S1SvImJ_T0038150.1 MGP_129S1SvImJ_G0020927.1 mouse_genomes_project 13 112282811 112333309 + MGP_129S1SvImJ_P0038150 Pde4d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038151.1 MGP_129S1SvImJ_G0020927.1 mouse_genomes_project 13 112282815 112335382 + MGP_129S1SvImJ_P0038151 Pde4d protein_coding protein_coding MGP_129S1SvImJ_T0038152.1 MGP_129S1SvImJ_G0020927.1 mouse_genomes_project 13 112302616 112319330 + Pde4d protein_coding retained_intron MGP_129S1SvImJ_T0038153.1 MGP_129S1SvImJ_G0020927.1 mouse_genomes_project 13 112304768 112333266 + MGP_129S1SvImJ_P0038153 Pde4d protein_coding protein_coding MGP_129S1SvImJ_T0038154.1 MGP_129S1SvImJ_G0020927.1 mouse_genomes_project 13 112306549 112333286 + MGP_129S1SvImJ_P0038154 Pde4d protein_coding protein_coding MGP_129S1SvImJ_T0038155.1 MGP_129S1SvImJ_G0020927.1 mouse_genomes_project 13 112314972 112330270 + MGP_129S1SvImJ_P0038155 Pde4d protein_coding protein_coding MGP_129S1SvImJ_T0003529.1 MGP_129S1SvImJ_G0003214.1 mouse_genomes_project 13 108961174 108972341 + Gm28989 antisense antisense MGP_129S1SvImJ_T0037608.1 MGP_129S1SvImJ_G0020766.1 mouse_genomes_project 13 74871151 74894738 - MGP_129S1SvImJ_P0037608 Zfp72 protein_coding protein_coding MGP_129S1SvImJ_T0036323.1 MGP_129S1SvImJ_G0020238.1 mouse_genomes_project 13 10923941 10967458 + MGP_129S1SvImJ_P0036323 B3galnt2 protein_coding protein_coding MGP_129S1SvImJ_T0006537.1 MGP_129S1SvImJ_G0005432.1 mouse_genomes_project 13 26813680 26814965 + A330102I10Rik lincRNA lincRNA MGP_129S1SvImJ_T0006538.1 MGP_129S1SvImJ_G0005432.1 mouse_genomes_project 13 26813753 26828000 + A330102I10Rik lincRNA lincRNA MGP_129S1SvImJ_T0006539.1 MGP_129S1SvImJ_G0005432.1 mouse_genomes_project 13 26815592 26828068 + A330102I10Rik lincRNA lincRNA MGP_129S1SvImJ_T0006540.1 MGP_129S1SvImJ_G0005432.1 mouse_genomes_project 13 26816007 26840950 + A330102I10Rik lincRNA lincRNA MGP_129S1SvImJ_T0100641.1 MGP_129S1SvImJ_G0038708.1 mouse_genomes_project 13 65185253 65185404 + Gm24130 snoRNA snoRNA MGP_129S1SvImJ_T0037939.1 MGP_129S1SvImJ_G0020865.1 mouse_genomes_project 13 100009838 100016910 - MGP_129S1SvImJ_P0037939 Btf3 protein_coding protein_coding MGP_129S1SvImJ_T0037940.1 MGP_129S1SvImJ_G0020865.1 mouse_genomes_project 13 100009839 100016949 - MGP_129S1SvImJ_P0037940 Btf3 protein_coding protein_coding MGP_129S1SvImJ_T0037941.1 MGP_129S1SvImJ_G0020865.1 mouse_genomes_project 13 100009840 100011458 - Btf3 protein_coding retained_intron MGP_129S1SvImJ_T0037942.1 MGP_129S1SvImJ_G0020865.1 mouse_genomes_project 13 100009884 100016319 - MGP_129S1SvImJ_P0037942 Btf3 protein_coding protein_coding MGP_129S1SvImJ_T0037943.1 MGP_129S1SvImJ_G0020865.1 mouse_genomes_project 13 100012981 100016939 - Btf3 protein_coding retained_intron MGP_129S1SvImJ_T0036942.1 MGP_129S1SvImJ_G0020529.1 mouse_genomes_project 13 47995695 48110669 - MGP_129S1SvImJ_P0036942 Wnk2 protein_coding protein_coding MGP_129S1SvImJ_T0036943.1 MGP_129S1SvImJ_G0020529.1 mouse_genomes_project 13 47995695 48110669 - MGP_129S1SvImJ_P0036943 Wnk2 protein_coding protein_coding MGP_129S1SvImJ_T0036944.1 MGP_129S1SvImJ_G0020529.1 mouse_genomes_project 13 47995695 48110669 - MGP_129S1SvImJ_P0036944 Wnk2 protein_coding protein_coding MGP_129S1SvImJ_T0036945.1 MGP_129S1SvImJ_G0020529.1 mouse_genomes_project 13 47995695 48110667 - MGP_129S1SvImJ_P0036945 Wnk2 protein_coding protein_coding MGP_129S1SvImJ_T0036946.1 MGP_129S1SvImJ_G0020529.1 mouse_genomes_project 13 47995701 48109887 - MGP_129S1SvImJ_P0036946 Wnk2 protein_coding protein_coding MGP_129S1SvImJ_T0036947.1 MGP_129S1SvImJ_G0020529.1 mouse_genomes_project 13 47995702 48109887 - MGP_129S1SvImJ_P0036947 Wnk2 protein_coding protein_coding MGP_129S1SvImJ_T0036948.1 MGP_129S1SvImJ_G0020529.1 mouse_genomes_project 13 47997001 48020789 - MGP_129S1SvImJ_P0036948 Wnk2 protein_coding protein_coding MGP_129S1SvImJ_T0036949.1 MGP_129S1SvImJ_G0020529.1 mouse_genomes_project 13 47997012 48037948 - MGP_129S1SvImJ_P0036949 Wnk2 protein_coding protein_coding MGP_129S1SvImJ_T0036950.1 MGP_129S1SvImJ_G0020529.1 mouse_genomes_project 13 47997373 48110669 - MGP_129S1SvImJ_P0036950 Wnk2 protein_coding protein_coding MGP_129S1SvImJ_T0036951.1 MGP_129S1SvImJ_G0020529.1 mouse_genomes_project 13 47998266 48110669 - MGP_129S1SvImJ_P0036951 Wnk2 protein_coding protein_coding MGP_129S1SvImJ_T0036952.1 MGP_129S1SvImJ_G0020529.1 mouse_genomes_project 13 48021234 48030920 - MGP_129S1SvImJ_P0036952 Wnk2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037369.1 MGP_129S1SvImJ_G0020662.1 mouse_genomes_project 13 61359334 61364635 - MGP_129S1SvImJ_P0037369 Ctsm protein_coding protein_coding MGP_129S1SvImJ_T0037296.1 MGP_129S1SvImJ_G0020635.1 mouse_genomes_project 13 58194643 58207448 - MGP_129S1SvImJ_P0037296 Slc28a3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037297.1 MGP_129S1SvImJ_G0020635.1 mouse_genomes_project 13 58202515 58265023 - MGP_129S1SvImJ_P0037297 Slc28a3 protein_coding protein_coding MGP_129S1SvImJ_T0037298.1 MGP_129S1SvImJ_G0020635.1 mouse_genomes_project 13 58233101 58265023 - MGP_129S1SvImJ_P0037298 Slc28a3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037299.1 MGP_129S1SvImJ_G0020635.1 mouse_genomes_project 13 58239282 58265015 - Slc28a3 protein_coding retained_intron MGP_129S1SvImJ_T0037350.1 MGP_129S1SvImJ_G0020646.1 mouse_genomes_project 13 59913594 59916556 - MGP_129S1SvImJ_P0037350 Gas1 protein_coding protein_coding MGP_129S1SvImJ_T0037429.1 MGP_129S1SvImJ_G0020679.1 mouse_genomes_project 13 64457414 64464436 + MGP_129S1SvImJ_P0037429 Cdk20 protein_coding protein_coding MGP_129S1SvImJ_T0009955.1 MGP_129S1SvImJ_G0008071.1 mouse_genomes_project 13 54997099 54997167 - Mir6945 miRNA miRNA MGP_129S1SvImJ_T0036211.1 MGP_129S1SvImJ_G0020206.1 mouse_genomes_project 13 757634 769380 - MGP_129S1SvImJ_P0036211 Akr1c12 protein_coding protein_coding MGP_129S1SvImJ_T0006580.1 MGP_129S1SvImJ_G0005462.1 mouse_genomes_project 13 47920480 47924829 + Fam120aos lincRNA lincRNA MGP_129S1SvImJ_T0009943.1 MGP_129S1SvImJ_G0008059.1 mouse_genomes_project 13 29555898 29555996 - Gm27516 miRNA miRNA MGP_129S1SvImJ_T0006636.1 MGP_129S1SvImJ_G0005497.1 mouse_genomes_project 13 100137111 100149155 - 2310005E17Rik lincRNA lincRNA MGP_129S1SvImJ_T0000920.1 MGP_129S1SvImJ_G0000852.1 mouse_genomes_project 13 101450588 101451418 + TEC TEC MGP_129S1SvImJ_T0000926.1 MGP_129S1SvImJ_G0000858.1 mouse_genomes_project 13 114756819 114758694 + TEC TEC MGP_129S1SvImJ_T0037589.1 MGP_129S1SvImJ_G0020761.1 mouse_genomes_project 13 74711955 74783431 - MGP_129S1SvImJ_P0037589 Ahrr protein_coding protein_coding MGP_129S1SvImJ_T0037590.1 MGP_129S1SvImJ_G0020761.1 mouse_genomes_project 13 74714365 74755363 - Ahrr protein_coding retained_intron MGP_129S1SvImJ_T0037591.1 MGP_129S1SvImJ_G0020761.1 mouse_genomes_project 13 74721327 74758490 - Ahrr protein_coding processed_transcript MGP_129S1SvImJ_T0037592.1 MGP_129S1SvImJ_G0020761.1 mouse_genomes_project 13 74723118 74759246 - Ahrr protein_coding processed_transcript MGP_129S1SvImJ_T0037372.1 MGP_129S1SvImJ_G0020665.1 mouse_genomes_project 13 62348304 62597477 - MGP_129S1SvImJ_P0037372 Zfp935 protein_coding protein_coding MGP_129S1SvImJ_T0038195.1 MGP_129S1SvImJ_G0020943.1 mouse_genomes_project 13 115589877 115592856 + MGP_129S1SvImJ_P0038195 Ccno protein_coding protein_coding MGP_129S1SvImJ_T0036200.1 MGP_129S1SvImJ_G0020201.1 mouse_genomes_project 13 430924 435584 - MGP_129S1SvImJ_P0036200 Ucn3 protein_coding protein_coding MGP_129S1SvImJ_T0099356.1 MGP_129S1SvImJ_G0037423.1 mouse_genomes_project 13 29677775 29677883 - Gm25186 snRNA snRNA MGP_129S1SvImJ_T0037190.1 MGP_129S1SvImJ_G0020598.1 mouse_genomes_project 13 54949443 54958332 + MGP_129S1SvImJ_P0037190 Prr7 protein_coding protein_coding MGP_129S1SvImJ_T0009961.1 MGP_129S1SvImJ_G0008077.1 mouse_genomes_project 13 63260576 63260650 + Mir23b miRNA miRNA MGP_129S1SvImJ_T0037117.1 MGP_129S1SvImJ_G0020579.1 mouse_genomes_project 13 54183658 54191789 - MGP_129S1SvImJ_P0037117 Sncb protein_coding protein_coding MGP_129S1SvImJ_T0037118.1 MGP_129S1SvImJ_G0020579.1 mouse_genomes_project 13 54184179 54191291 - MGP_129S1SvImJ_P0037118 Sncb protein_coding protein_coding MGP_129S1SvImJ_T0037119.1 MGP_129S1SvImJ_G0020579.1 mouse_genomes_project 13 54184226 54187866 - Sncb protein_coding retained_intron MGP_129S1SvImJ_T0037120.1 MGP_129S1SvImJ_G0020579.1 mouse_genomes_project 13 54189857 54191686 - Sncb protein_coding retained_intron MGP_129S1SvImJ_T0037366.1 MGP_129S1SvImJ_G0020659.1 mouse_genomes_project 13 60993915 61002194 - MGP_129S1SvImJ_P0037366 Cts6 protein_coding protein_coding MGP_129S1SvImJ_T0036616.1 MGP_129S1SvImJ_G0020391.1 mouse_genomes_project 13 24739810 24774230 + MGP_129S1SvImJ_P0036616 Prl3d3 protein_coding protein_coding MGP_129S1SvImJ_T0012886.1 MGP_129S1SvImJ_G0010975.1 mouse_genomes_project 13 18774572 18775247 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0037602.1 MGP_129S1SvImJ_G0020764.1 mouse_genomes_project 13 74851139 74867109 + MGP_129S1SvImJ_P0037602 Ccdc127 protein_coding protein_coding MGP_129S1SvImJ_T0037603.1 MGP_129S1SvImJ_G0020764.1 mouse_genomes_project 13 74851147 74864027 + MGP_129S1SvImJ_P0037603 Ccdc127 protein_coding protein_coding MGP_129S1SvImJ_T0037604.1 MGP_129S1SvImJ_G0020764.1 mouse_genomes_project 13 74851174 74862411 + MGP_129S1SvImJ_P0037604 Ccdc127 protein_coding protein_coding MGP_129S1SvImJ_T0037605.1 MGP_129S1SvImJ_G0020764.1 mouse_genomes_project 13 74851175 74862021 + MGP_129S1SvImJ_P0037605 Ccdc127 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037606.1 MGP_129S1SvImJ_G0020764.1 mouse_genomes_project 13 74851195 74858366 + MGP_129S1SvImJ_P0037606 Ccdc127 protein_coding protein_coding MGP_129S1SvImJ_T0036360.1 MGP_129S1SvImJ_G0020249.1 mouse_genomes_project 13 13878633 14748207 - MGP_129S1SvImJ_P0036360 Sugct protein_coding protein_coding MGP_129S1SvImJ_T0006655.1 MGP_129S1SvImJ_G0005514.1 mouse_genomes_project 13 117332134 117382804 + 4930544M13Rik lincRNA lincRNA MGP_129S1SvImJ_T0006656.1 MGP_129S1SvImJ_G0005514.1 mouse_genomes_project 13 117332134 117425193 + 4930544M13Rik lincRNA lincRNA MGP_129S1SvImJ_T0098827.1 MGP_129S1SvImJ_G0036908.1 mouse_genomes_project 13 92632129 92632582 - Gm29540 sense_intronic sense_intronic MGP_129S1SvImJ_T0009971.1 MGP_129S1SvImJ_G0008087.1 mouse_genomes_project 13 88471500 88471610 + Gm24935 miRNA miRNA MGP_129S1SvImJ_T0012958.1 MGP_129S1SvImJ_G0011047.1 mouse_genomes_project 13 85243998 85244963 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006654.1 MGP_129S1SvImJ_G0005513.1 mouse_genomes_project 13 114521225 114533832 + Gm15323 lincRNA lincRNA MGP_129S1SvImJ_T0036746.1 MGP_129S1SvImJ_G0020451.1 mouse_genomes_project 13 32756287 32780845 - MGP_129S1SvImJ_P0036746 Pxdc1 protein_coding protein_coding MGP_129S1SvImJ_T0036747.1 MGP_129S1SvImJ_G0020451.1 mouse_genomes_project 13 32756287 32780855 - MGP_129S1SvImJ_P0036747 Pxdc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036748.1 MGP_129S1SvImJ_G0020451.1 mouse_genomes_project 13 32756288 32780855 - MGP_129S1SvImJ_P0036748 Pxdc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036749.1 MGP_129S1SvImJ_G0020451.1 mouse_genomes_project 13 32757315 32776748 - MGP_129S1SvImJ_P0036749 Pxdc1 protein_coding protein_coding MGP_129S1SvImJ_T0100620.1 MGP_129S1SvImJ_G0038687.1 mouse_genomes_project 13 5579063 5579198 - Gm25274 snoRNA snoRNA MGP_129S1SvImJ_T0038159.1 MGP_129S1SvImJ_G0020931.1 mouse_genomes_project 13 113735642 113738379 + MGP_129S1SvImJ_P0038159 Actbl2 protein_coding protein_coding MGP_129S1SvImJ_T0011376.1 MGP_129S1SvImJ_G0009492.1 mouse_genomes_project 13 56280629 56280756 + Gm27301 misc_RNA misc_RNA MGP_129S1SvImJ_T0101626.1 MGP_129S1SvImJ_G0039665.1 mouse_genomes_project 13 105230316 105234592 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0006551.1 MGP_129S1SvImJ_G0005441.1 mouse_genomes_project 13 29488338 29498135 + Gm11377 lincRNA lincRNA MGP_129S1SvImJ_T0036491.1 MGP_129S1SvImJ_G0020327.1 mouse_genomes_project 13 20179323 20180930 - MGP_129S1SvImJ_P0036491 Vmn1r209 protein_coding protein_coding MGP_129S1SvImJ_T0009983.1 MGP_129S1SvImJ_G0008099.1 mouse_genomes_project 13 115644543 115644623 + Mir449b miRNA miRNA MGP_129S1SvImJ_T0036709.1 MGP_129S1SvImJ_G0020441.1 mouse_genomes_project 13 31944444 31955492 - MGP_129S1SvImJ_P0036709 Serpinb6e protein_coding protein_coding MGP_129S1SvImJ_T0036710.1 MGP_129S1SvImJ_G0020441.1 mouse_genomes_project 13 31953086 31955492 - MGP_129S1SvImJ_P0036710 Serpinb6e protein_coding protein_coding MGP_129S1SvImJ_T0036445.1 MGP_129S1SvImJ_G0020292.1 mouse_genomes_project 13 18995947 18998084 + MGP_129S1SvImJ_P0036445 Hist1h2bm protein_coding protein_coding MGP_129S1SvImJ_T0037428.1 MGP_129S1SvImJ_G0020678.1 mouse_genomes_project 13 64387133 64394038 - MGP_129S1SvImJ_P0037428 Ctsl protein_coding protein_coding MGP_129S1SvImJ_T0006628.1 MGP_129S1SvImJ_G0005493.1 mouse_genomes_project 13 97641189 97642156 + Gm29543 lincRNA lincRNA MGP_129S1SvImJ_T0038158.1 MGP_129S1SvImJ_G0020930.1 mouse_genomes_project 13 112803197 112810378 + MGP_129S1SvImJ_P0038158 Plk2 protein_coding protein_coding MGP_129S1SvImJ_T0099360.1 MGP_129S1SvImJ_G0037427.1 mouse_genomes_project 13 40076895 40077061 - Gm24819 snRNA snRNA MGP_129S1SvImJ_T0003473.1 MGP_129S1SvImJ_G0003184.1 mouse_genomes_project 13 40355235 40363325 + Gm28564 antisense antisense MGP_129S1SvImJ_T0037282.1 MGP_129S1SvImJ_G0020632.1 mouse_genomes_project 13 58019571 58024431 - MGP_129S1SvImJ_P0037282 2210016F16Rik protein_coding protein_coding MGP_129S1SvImJ_T0036535.1 MGP_129S1SvImJ_G0020361.1 mouse_genomes_project 13 21189687 21190139 + MGP_129S1SvImJ_P0036535 Hist1h2bb protein_coding protein_coding MGP_129S1SvImJ_T0036459.1 MGP_129S1SvImJ_G0020304.1 mouse_genomes_project 13 19255972 19279244 + MGP_129S1SvImJ_P0036459 Zfp184 protein_coding protein_coding MGP_129S1SvImJ_T0036460.1 MGP_129S1SvImJ_G0020304.1 mouse_genomes_project 13 19255990 19279533 + MGP_129S1SvImJ_P0036460 Zfp184 protein_coding protein_coding MGP_129S1SvImJ_T0036461.1 MGP_129S1SvImJ_G0020304.1 mouse_genomes_project 13 19255990 19279362 + MGP_129S1SvImJ_P0036461 Zfp184 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036462.1 MGP_129S1SvImJ_G0020304.1 mouse_genomes_project 13 19256015 19261208 + MGP_129S1SvImJ_P0036462 Zfp184 protein_coding protein_coding MGP_129S1SvImJ_T0036463.1 MGP_129S1SvImJ_G0020304.1 mouse_genomes_project 13 19256671 19279098 + MGP_129S1SvImJ_P0036463 Zfp184 protein_coding protein_coding MGP_129S1SvImJ_T0036464.1 MGP_129S1SvImJ_G0020304.1 mouse_genomes_project 13 19260272 19277470 + Zfp184 protein_coding retained_intron MGP_129S1SvImJ_T0036557.1 MGP_129S1SvImJ_G0020376.1 mouse_genomes_project 13 21466106 21563590 - MGP_129S1SvImJ_P0036557 Lrrc16a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036558.1 MGP_129S1SvImJ_G0020376.1 mouse_genomes_project 13 21466246 21476319 - MGP_129S1SvImJ_P0036558 Lrrc16a protein_coding protein_coding MGP_129S1SvImJ_T0036559.1 MGP_129S1SvImJ_G0020376.1 mouse_genomes_project 13 21466421 21744389 - MGP_129S1SvImJ_P0036559 Lrrc16a protein_coding protein_coding MGP_129S1SvImJ_T0036560.1 MGP_129S1SvImJ_G0020376.1 mouse_genomes_project 13 21466823 21744319 - MGP_129S1SvImJ_P0036560 Lrrc16a protein_coding protein_coding MGP_129S1SvImJ_T0036561.1 MGP_129S1SvImJ_G0020376.1 mouse_genomes_project 13 21483706 21510125 - Lrrc16a protein_coding processed_transcript MGP_129S1SvImJ_T0036562.1 MGP_129S1SvImJ_G0020376.1 mouse_genomes_project 13 21514954 21554930 - Lrrc16a protein_coding retained_intron MGP_129S1SvImJ_T0036563.1 MGP_129S1SvImJ_G0020376.1 mouse_genomes_project 13 21563565 21567828 - Lrrc16a protein_coding processed_transcript MGP_129S1SvImJ_T0036564.1 MGP_129S1SvImJ_G0020376.1 mouse_genomes_project 13 21594338 21744385 - Lrrc16a protein_coding retained_intron MGP_129S1SvImJ_T0036565.1 MGP_129S1SvImJ_G0020376.1 mouse_genomes_project 13 21595870 21611791 - Lrrc16a protein_coding processed_transcript MGP_129S1SvImJ_T0036566.1 MGP_129S1SvImJ_G0020376.1 mouse_genomes_project 13 21612018 21744089 - MGP_129S1SvImJ_P0036566 Lrrc16a protein_coding protein_coding MGP_129S1SvImJ_T0036567.1 MGP_129S1SvImJ_G0020376.1 mouse_genomes_project 13 21621443 21667571 - MGP_129S1SvImJ_P0036567 Lrrc16a protein_coding protein_coding MGP_129S1SvImJ_T0036568.1 MGP_129S1SvImJ_G0020376.1 mouse_genomes_project 13 21633010 21700363 - Lrrc16a protein_coding processed_transcript MGP_129S1SvImJ_T0036976.1 MGP_129S1SvImJ_G0020539.1 mouse_genomes_project 13 48563168 48574519 + MGP_129S1SvImJ_P0036976 Omd protein_coding protein_coding MGP_129S1SvImJ_T0099376.1 MGP_129S1SvImJ_G0037443.1 mouse_genomes_project 13 102525384 102525488 + Gm24261 snRNA snRNA MGP_129S1SvImJ_T0038064.1 MGP_129S1SvImJ_G0020903.1 mouse_genomes_project 13 106198747 106220879 + MGP_129S1SvImJ_P0038064 Sgtb protein_coding protein_coding MGP_129S1SvImJ_T0038065.1 MGP_129S1SvImJ_G0020903.1 mouse_genomes_project 13 106198795 106227784 + MGP_129S1SvImJ_P0038065 Sgtb protein_coding protein_coding MGP_129S1SvImJ_T0006625.1 MGP_129S1SvImJ_G0005490.1 mouse_genomes_project 13 92626474 92648774 - A830009L08Rik lincRNA lincRNA MGP_129S1SvImJ_T0099354.1 MGP_129S1SvImJ_G0037421.1 mouse_genomes_project 13 25509476 25509576 + Gm22476 snRNA snRNA MGP_129S1SvImJ_T0102221.1 MGP_129S1SvImJ_G0040055.1 mouse_genomes_project 13 31631951 31650249 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0038209.1 MGP_129S1SvImJ_G0020951.1 mouse_genomes_project 13 115922361 116000803 + MGP_129S1SvImJ_P0038209 BC067074 protein_coding protein_coding MGP_129S1SvImJ_T0038210.1 MGP_129S1SvImJ_G0020951.1 mouse_genomes_project 13 115970549 116001801 + MGP_129S1SvImJ_P0038210 BC067074 protein_coding protein_coding MGP_129S1SvImJ_T0038211.1 MGP_129S1SvImJ_G0020951.1 mouse_genomes_project 13 115980266 116011373 + MGP_129S1SvImJ_P0038211 BC067074 protein_coding protein_coding MGP_129S1SvImJ_T0012968.1 MGP_129S1SvImJ_G0011057.1 mouse_genomes_project 13 99081577 99083203 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009986.1 MGP_129S1SvImJ_G0008102.1 mouse_genomes_project 13 122256705 122256824 - Gm44488 miRNA miRNA MGP_129S1SvImJ_T0099362.1 MGP_129S1SvImJ_G0037429.1 mouse_genomes_project 13 42021575 42021684 - Gm26064 snRNA snRNA MGP_129S1SvImJ_T0012880.1 MGP_129S1SvImJ_G0010969.1 mouse_genomes_project 13 9137354 9137813 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009926.1 MGP_129S1SvImJ_G0008042.1 mouse_genomes_project 13 3675842 3675952 - Gm22689 miRNA miRNA MGP_129S1SvImJ_T0036769.1 MGP_129S1SvImJ_G0020461.1 mouse_genomes_project 13 34181861 34332790 - MGP_129S1SvImJ_P0036769 Lyrm4 protein_coding protein_coding MGP_129S1SvImJ_T0036447.1 MGP_129S1SvImJ_G0020294.1 mouse_genomes_project 13 19031635 19031888 - MGP_129S1SvImJ_P0036447 Hist1h4k protein_coding protein_coding MGP_129S1SvImJ_T0036267.1 MGP_129S1SvImJ_G0020221.1 mouse_genomes_project 13 5574320 5582694 + MGP_129S1SvImJ_P0036267 protein_coding protein_coding MGP_129S1SvImJ_T0036268.1 MGP_129S1SvImJ_G0020221.1 mouse_genomes_project 13 5579942 5582564 + MGP_129S1SvImJ_P0036268 protein_coding protein_coding MGP_129S1SvImJ_T0099345.1 MGP_129S1SvImJ_G0037412.1 mouse_genomes_project 13 10230772 10230872 - Gm26133 snRNA snRNA MGP_129S1SvImJ_T0099375.1 MGP_129S1SvImJ_G0037442.1 mouse_genomes_project 13 97609291 97609391 - Gm23955 snRNA snRNA MGP_129S1SvImJ_T0012956.1 MGP_129S1SvImJ_G0011045.1 mouse_genomes_project 13 80774911 80776075 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036602.1 MGP_129S1SvImJ_G0020385.1 mouse_genomes_project 13 22442529 22495753 + MGP_129S1SvImJ_P0036602 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0036603.1 MGP_129S1SvImJ_G0020385.1 mouse_genomes_project 13 22460632 22467595 + protein_coding processed_transcript MGP_129S1SvImJ_T0036604.1 MGP_129S1SvImJ_G0020385.1 mouse_genomes_project 13 22485009 22496384 + MGP_129S1SvImJ_P0036604 protein_coding protein_coding MGP_129S1SvImJ_T0006657.1 MGP_129S1SvImJ_G0005515.1 mouse_genomes_project 13 121541497 121581445 + 1700003P14Rik lincRNA lincRNA MGP_129S1SvImJ_T0006658.1 MGP_129S1SvImJ_G0005515.1 mouse_genomes_project 13 121542289 121581367 + 1700003P14Rik lincRNA lincRNA MGP_129S1SvImJ_T0006659.1 MGP_129S1SvImJ_G0005515.1 mouse_genomes_project 13 121542305 121581370 + 1700003P14Rik lincRNA lincRNA MGP_129S1SvImJ_T0012899.1 MGP_129S1SvImJ_G0010988.1 mouse_genomes_project 13 20781935 20782091 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0037850.1 MGP_129S1SvImJ_G0020835.1 mouse_genomes_project 13 96314002 96324264 + MGP_129S1SvImJ_P0037850 Otp protein_coding protein_coding MGP_129S1SvImJ_T0037851.1 MGP_129S1SvImJ_G0020835.1 mouse_genomes_project 13 96321000 96321995 + Otp protein_coding processed_transcript MGP_129S1SvImJ_T0012884.1 MGP_129S1SvImJ_G0010973.1 mouse_genomes_project 13 18548809 18549280 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0037216.1 MGP_129S1SvImJ_G0020605.1 mouse_genomes_project 13 55090132 55100680 + MGP_129S1SvImJ_P0037216 B4galt7 protein_coding protein_coding MGP_129S1SvImJ_T0037217.1 MGP_129S1SvImJ_G0020605.1 mouse_genomes_project 13 55090301 55098255 + B4galt7 protein_coding retained_intron MGP_129S1SvImJ_T0037218.1 MGP_129S1SvImJ_G0020605.1 mouse_genomes_project 13 55090301 55099039 + MGP_129S1SvImJ_P0037218 B4galt7 protein_coding protein_coding MGP_129S1SvImJ_T0037219.1 MGP_129S1SvImJ_G0020605.1 mouse_genomes_project 13 55090301 55100679 + MGP_129S1SvImJ_P0037219 B4galt7 protein_coding protein_coding MGP_129S1SvImJ_T0036728.1 MGP_129S1SvImJ_G0020444.1 mouse_genomes_project 13 32066552 32091300 + MGP_129S1SvImJ_P0036728 Nqo2 protein_coding protein_coding MGP_129S1SvImJ_T0036729.1 MGP_129S1SvImJ_G0020444.1 mouse_genomes_project 13 32066552 32091300 + MGP_129S1SvImJ_P0036729 Nqo2 protein_coding protein_coding MGP_129S1SvImJ_T0037616.1 MGP_129S1SvImJ_G0020772.1 mouse_genomes_project 13 76376782 76387410 + MGP_129S1SvImJ_P0037616 Glrx protein_coding protein_coding MGP_129S1SvImJ_T0012932.1 MGP_129S1SvImJ_G0011021.1 mouse_genomes_project 13 53901081 53901466 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0012890.1 MGP_129S1SvImJ_G0010979.1 mouse_genomes_project 13 19275465 19276882 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036802.1 MGP_129S1SvImJ_G0020474.1 mouse_genomes_project 13 36965790 37001323 - MGP_129S1SvImJ_P0036802 Bloc1s5 protein_coding protein_coding MGP_129S1SvImJ_T0037370.1 MGP_129S1SvImJ_G0020663.1 mouse_genomes_project 13 61394999 61402750 - MGP_129S1SvImJ_P0037370 Cts3 protein_coding protein_coding MGP_129S1SvImJ_T0038072.1 MGP_129S1SvImJ_G0020905.1 mouse_genomes_project 13 106269451 106293620 + MGP_129S1SvImJ_P0038072 Trim23 protein_coding protein_coding MGP_129S1SvImJ_T0038073.1 MGP_129S1SvImJ_G0020905.1 mouse_genomes_project 13 106269493 106293975 + MGP_129S1SvImJ_P0038073 Trim23 protein_coding protein_coding MGP_129S1SvImJ_T0038074.1 MGP_129S1SvImJ_G0020905.1 mouse_genomes_project 13 106269515 106280370 + MGP_129S1SvImJ_P0038074 Trim23 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038075.1 MGP_129S1SvImJ_G0020905.1 mouse_genomes_project 13 106269752 106292651 + MGP_129S1SvImJ_P0038075 Trim23 protein_coding protein_coding MGP_129S1SvImJ_T0037551.1 MGP_129S1SvImJ_G0020743.1 mouse_genomes_project 13 73750475 73761356 - MGP_129S1SvImJ_P0037551 Ndufs6 protein_coding protein_coding MGP_129S1SvImJ_T0037552.1 MGP_129S1SvImJ_G0020743.1 mouse_genomes_project 13 73750480 73761266 - MGP_129S1SvImJ_P0037552 Ndufs6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037351.1 MGP_129S1SvImJ_G0020647.1 mouse_genomes_project 13 59953152 59954154 + MGP_129S1SvImJ_P0037351 Gm5084 protein_coding protein_coding MGP_129S1SvImJ_T0036937.1 MGP_129S1SvImJ_G0020524.1 mouse_genomes_project 13 47405907 47407197 + MGP_129S1SvImJ_P0036937 A830005F24Rik protein_coding protein_coding MGP_129S1SvImJ_T0098487.1 MGP_129S1SvImJ_G0036572.1 mouse_genomes_project 13 52267484 52267596 - n-R5s54 rRNA rRNA MGP_129S1SvImJ_T0102222.1 MGP_129S1SvImJ_G0040056.1 mouse_genomes_project 13 31675050 31682678 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0036494.1 MGP_129S1SvImJ_G0020330.1 mouse_genomes_project 13 20380912 20383592 + MGP_129S1SvImJ_P0036494 Vmn1r213 protein_coding protein_coding MGP_129S1SvImJ_T0037443.1 MGP_129S1SvImJ_G0020690.1 mouse_genomes_project 13 65317035 65341212 + MGP_129S1SvImJ_P0037443 Zfp369 protein_coding protein_coding MGP_129S1SvImJ_T0037444.1 MGP_129S1SvImJ_G0020690.1 mouse_genomes_project 13 65317035 65334277 + MGP_129S1SvImJ_P0037444 Zfp369 protein_coding protein_coding MGP_129S1SvImJ_T0037445.1 MGP_129S1SvImJ_G0020690.1 mouse_genomes_project 13 65317073 65323989 + Zfp369 protein_coding retained_intron MGP_129S1SvImJ_T0037446.1 MGP_129S1SvImJ_G0020690.1 mouse_genomes_project 13 65317124 65321472 + MGP_129S1SvImJ_P0037446 Zfp369 protein_coding protein_coding MGP_129S1SvImJ_T0006530.1 MGP_129S1SvImJ_G0005426.1 mouse_genomes_project 13 21831732 21841714 - Gm11345 lincRNA lincRNA MGP_129S1SvImJ_T0037537.1 MGP_129S1SvImJ_G0020737.1 mouse_genomes_project 13 71046131 71166072 - MGP_129S1SvImJ_P0037537 Adamts16 protein_coding protein_coding MGP_129S1SvImJ_T0037538.1 MGP_129S1SvImJ_G0020737.1 mouse_genomes_project 13 71046139 71166036 - MGP_129S1SvImJ_P0037538 Adamts16 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037539.1 MGP_129S1SvImJ_G0020737.1 mouse_genomes_project 13 71080465 71166072 - MGP_129S1SvImJ_P0037539 Adamts16 protein_coding protein_coding MGP_129S1SvImJ_T0037540.1 MGP_129S1SvImJ_G0020737.1 mouse_genomes_project 13 71157553 71166069 - Adamts16 protein_coding retained_intron MGP_129S1SvImJ_T0012908.1 MGP_129S1SvImJ_G0010997.1 mouse_genomes_project 13 23111982 23112674 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0037541.1 MGP_129S1SvImJ_G0020738.1 mouse_genomes_project 13 71212714 71214270 + MGP_129S1SvImJ_P0037541 8030423J24Rik protein_coding protein_coding MGP_129S1SvImJ_T0100631.1 MGP_129S1SvImJ_G0038698.1 mouse_genomes_project 13 43522216 43522335 - Gm22213 snoRNA snoRNA MGP_129S1SvImJ_T0098489.1 MGP_129S1SvImJ_G0036574.1 mouse_genomes_project 13 105478511 105478616 + n-R5s56 rRNA rRNA MGP_129S1SvImJ_T0003516.1 MGP_129S1SvImJ_G0003207.1 mouse_genomes_project 13 95067503 95080534 - AW495222 antisense antisense MGP_129S1SvImJ_T0003517.1 MGP_129S1SvImJ_G0003207.1 mouse_genomes_project 13 95076709 95080493 - AW495222 antisense antisense MGP_129S1SvImJ_T0036388.1 MGP_129S1SvImJ_G0020261.1 mouse_genomes_project 13 16821478 16880879 - MGP_129S1SvImJ_P0036388 Nme8 protein_coding protein_coding MGP_129S1SvImJ_T0036389.1 MGP_129S1SvImJ_G0020261.1 mouse_genomes_project 13 16821478 16880913 - MGP_129S1SvImJ_P0036389 Nme8 protein_coding protein_coding MGP_129S1SvImJ_T0036390.1 MGP_129S1SvImJ_G0020261.1 mouse_genomes_project 13 16857136 16872690 - Nme8 protein_coding processed_transcript MGP_129S1SvImJ_T0003459.1 MGP_129S1SvImJ_G0003173.1 mouse_genomes_project 13 20044061 20044875 + Gm11314 antisense antisense MGP_129S1SvImJ_T0037945.1 MGP_129S1SvImJ_G0020867.1 mouse_genomes_project 13 100204658 100207312 - MGP_129S1SvImJ_P0037945 Gm10320 protein_coding protein_coding MGP_129S1SvImJ_T0009982.1 MGP_129S1SvImJ_G0008098.1 mouse_genomes_project 13 115643108 115643217 + Mir449c miRNA miRNA MGP_129S1SvImJ_T0036364.1 MGP_129S1SvImJ_G0020253.1 mouse_genomes_project 13 14946111 15008264 - MGP_129S1SvImJ_P0036364 Rala protein_coding protein_coding MGP_129S1SvImJ_T0038187.1 MGP_129S1SvImJ_G0020937.1 mouse_genomes_project 13 115085658 115143322 - MGP_129S1SvImJ_P0038187 Il31ra protein_coding protein_coding MGP_129S1SvImJ_T0036419.1 MGP_129S1SvImJ_G0020275.1 mouse_genomes_project 13 18682857 18705156 - MGP_129S1SvImJ_P0036419 Pgbd1 protein_coding protein_coding MGP_129S1SvImJ_T0036420.1 MGP_129S1SvImJ_G0020275.1 mouse_genomes_project 13 18684357 18705261 - MGP_129S1SvImJ_P0036420 Pgbd1 protein_coding protein_coding MGP_129S1SvImJ_T0036421.1 MGP_129S1SvImJ_G0020275.1 mouse_genomes_project 13 18684776 18704965 - MGP_129S1SvImJ_P0036421 Pgbd1 protein_coding protein_coding MGP_129S1SvImJ_T0037368.1 MGP_129S1SvImJ_G0020661.1 mouse_genomes_project 13 61166575 61172293 - MGP_129S1SvImJ_P0037368 Cts7 protein_coding protein_coding MGP_129S1SvImJ_T0037956.1 MGP_129S1SvImJ_G0020872.1 mouse_genomes_project 13 100754412 100754893 - MGP_129S1SvImJ_P0037956 1700024P04Rik protein_coding protein_coding MGP_129S1SvImJ_T0036972.1 MGP_129S1SvImJ_G0020536.1 mouse_genomes_project 13 48440276 48632062 - MGP_129S1SvImJ_P0036972 Cenpp protein_coding protein_coding MGP_129S1SvImJ_T0009934.1 MGP_129S1SvImJ_G0008050.1 mouse_genomes_project 13 19065041 19065167 + miRNA miRNA MGP_129S1SvImJ_T0012962.1 MGP_129S1SvImJ_G0011051.1 mouse_genomes_project 13 89565549 89566020 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036596.1 MGP_129S1SvImJ_G0020383.1 mouse_genomes_project 13 22344320 22401518 + MGP_129S1SvImJ_P0036596 D130043K22Rik protein_coding protein_coding MGP_129S1SvImJ_T0036597.1 MGP_129S1SvImJ_G0020383.1 mouse_genomes_project 13 22344320 22401511 + MGP_129S1SvImJ_P0036597 D130043K22Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036598.1 MGP_129S1SvImJ_G0020383.1 mouse_genomes_project 13 22353555 22405292 + MGP_129S1SvImJ_P0036598 D130043K22Rik protein_coding unknown_likely_coding MGP_129S1SvImJ_T0036599.1 MGP_129S1SvImJ_G0020383.1 mouse_genomes_project 13 22380120 22382255 + D130043K22Rik protein_coding processed_transcript MGP_129S1SvImJ_T0036600.1 MGP_129S1SvImJ_G0020383.1 mouse_genomes_project 13 22393328 22400096 + D130043K22Rik protein_coding processed_transcript MGP_129S1SvImJ_T0038037.1 MGP_129S1SvImJ_G0020899.1 mouse_genomes_project 13 104789676 105412441 - MGP_129S1SvImJ_P0038037 Mast4 protein_coding protein_coding MGP_129S1SvImJ_T0038038.1 MGP_129S1SvImJ_G0020899.1 mouse_genomes_project 13 104789681 105412709 - MGP_129S1SvImJ_P0038038 Mast4 protein_coding protein_coding MGP_129S1SvImJ_T0038039.1 MGP_129S1SvImJ_G0020899.1 mouse_genomes_project 13 104791981 105164398 - MGP_129S1SvImJ_P0038039 Mast4 protein_coding protein_coding MGP_129S1SvImJ_T0038040.1 MGP_129S1SvImJ_G0020899.1 mouse_genomes_project 13 104792200 105012579 - MGP_129S1SvImJ_P0038040 Mast4 protein_coding protein_coding MGP_129S1SvImJ_T0038041.1 MGP_129S1SvImJ_G0020899.1 mouse_genomes_project 13 104792200 104958540 - MGP_129S1SvImJ_P0038041 Mast4 protein_coding protein_coding MGP_129S1SvImJ_T0038042.1 MGP_129S1SvImJ_G0020899.1 mouse_genomes_project 13 104799167 104958217 - MGP_129S1SvImJ_P0038042 Mast4 protein_coding protein_coding MGP_129S1SvImJ_T0038043.1 MGP_129S1SvImJ_G0020899.1 mouse_genomes_project 13 104811326 105012463 - MGP_129S1SvImJ_P0038043 Mast4 protein_coding protein_coding MGP_129S1SvImJ_T0038044.1 MGP_129S1SvImJ_G0020899.1 mouse_genomes_project 13 104825315 104829576 - Mast4 protein_coding retained_intron MGP_129S1SvImJ_T0038045.1 MGP_129S1SvImJ_G0020899.1 mouse_genomes_project 13 104836328 104840563 - Mast4 protein_coding retained_intron MGP_129S1SvImJ_T0038046.1 MGP_129S1SvImJ_G0020899.1 mouse_genomes_project 13 104853491 105164381 - MGP_129S1SvImJ_P0038046 Mast4 protein_coding protein_coding MGP_129S1SvImJ_T0038047.1 MGP_129S1SvImJ_G0020899.1 mouse_genomes_project 13 104856270 104860282 - Mast4 protein_coding retained_intron MGP_129S1SvImJ_T0038048.1 MGP_129S1SvImJ_G0020899.1 mouse_genomes_project 13 104905101 105412709 - MGP_129S1SvImJ_P0038048 Mast4 protein_coding protein_coding MGP_129S1SvImJ_T0038049.1 MGP_129S1SvImJ_G0020899.1 mouse_genomes_project 13 104906257 104958509 - Mast4 protein_coding retained_intron MGP_129S1SvImJ_T0038050.1 MGP_129S1SvImJ_G0020899.1 mouse_genomes_project 13 105084995 105412711 - Mast4 protein_coding retained_intron MGP_129S1SvImJ_T0038051.1 MGP_129S1SvImJ_G0020899.1 mouse_genomes_project 13 105122549 105412746 - Mast4 protein_coding processed_transcript MGP_129S1SvImJ_T0038052.1 MGP_129S1SvImJ_G0020899.1 mouse_genomes_project 13 105134609 105412700 - Mast4 protein_coding processed_transcript MGP_129S1SvImJ_T0038053.1 MGP_129S1SvImJ_G0020899.1 mouse_genomes_project 13 105161730 105164397 - Mast4 protein_coding retained_intron MGP_129S1SvImJ_T0038054.1 MGP_129S1SvImJ_G0020899.1 mouse_genomes_project 13 105411220 105412741 - Mast4 protein_coding retained_intron MGP_129S1SvImJ_T0036529.1 MGP_129S1SvImJ_G0020357.1 mouse_genomes_project 13 21131255 21131981 + MGP_129S1SvImJ_P0036529 Hist1h1t protein_coding protein_coding MGP_129S1SvImJ_T0006525.1 MGP_129S1SvImJ_G0005422.1 mouse_genomes_project 13 20676872 20718151 - 4930557F10Rik lincRNA lincRNA MGP_129S1SvImJ_T0009966.1 MGP_129S1SvImJ_G0008082.1 mouse_genomes_project 13 76182974 76183070 + Mir682 miRNA miRNA MGP_129S1SvImJ_T0011378.1 MGP_129S1SvImJ_G0009494.1 mouse_genomes_project 13 56281010 56281180 + Gm27271 misc_RNA misc_RNA MGP_129S1SvImJ_T0036666.1 MGP_129S1SvImJ_G0020415.1 mouse_genomes_project 13 28526994 28579706 + MGP_129S1SvImJ_P0036666 Dusp22 protein_coding protein_coding MGP_129S1SvImJ_T0036667.1 MGP_129S1SvImJ_G0020415.1 mouse_genomes_project 13 28527056 28574606 + MGP_129S1SvImJ_P0036667 Dusp22 protein_coding protein_coding MGP_129S1SvImJ_T0036668.1 MGP_129S1SvImJ_G0020415.1 mouse_genomes_project 13 28527105 28577379 + MGP_129S1SvImJ_P0036668 Dusp22 protein_coding protein_coding MGP_129S1SvImJ_T0037363.1 MGP_129S1SvImJ_G0020657.1 mouse_genomes_project 13 60816018 60821521 - MGP_129S1SvImJ_P0037363 Ctsq protein_coding protein_coding MGP_129S1SvImJ_T0037364.1 MGP_129S1SvImJ_G0020657.1 mouse_genomes_project 13 60816028 60819087 - Ctsq protein_coding retained_intron MGP_129S1SvImJ_T0100629.1 MGP_129S1SvImJ_G0038696.1 mouse_genomes_project 13 29343047 29343172 + Gm23351 snoRNA snoRNA MGP_129S1SvImJ_T0037561.1 MGP_129S1SvImJ_G0020747.1 mouse_genomes_project 13 74060047 74076685 + MGP_129S1SvImJ_P0037561 Clptm1l protein_coding protein_coding MGP_129S1SvImJ_T0009925.1 MGP_129S1SvImJ_G0008041.1 mouse_genomes_project 13 2535036 2535133 - Gm26259 miRNA miRNA MGP_129S1SvImJ_T0037548.1 MGP_129S1SvImJ_G0020741.1 mouse_genomes_project 13 73688303 73697398 + MGP_129S1SvImJ_P0037548 Irx4 protein_coding protein_coding MGP_129S1SvImJ_T0037549.1 MGP_129S1SvImJ_G0020741.1 mouse_genomes_project 13 73688321 73697398 + MGP_129S1SvImJ_P0037549 Irx4 protein_coding protein_coding MGP_129S1SvImJ_T0037935.1 MGP_129S1SvImJ_G0020864.1 mouse_genomes_project 13 99978994 100007097 + MGP_129S1SvImJ_P0037935 Gm21976 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037936.1 MGP_129S1SvImJ_G0020864.1 mouse_genomes_project 13 99978999 99993670 + MGP_129S1SvImJ_P0037936 Gm21976 protein_coding protein_coding MGP_129S1SvImJ_T0037937.1 MGP_129S1SvImJ_G0020864.1 mouse_genomes_project 13 99979045 100007097 + MGP_129S1SvImJ_P0037937 Gm21976 protein_coding protein_coding MGP_129S1SvImJ_T0037938.1 MGP_129S1SvImJ_G0020864.1 mouse_genomes_project 13 100002355 100007035 + MGP_129S1SvImJ_P0037938 Gm21976 protein_coding protein_coding MGP_129S1SvImJ_T0012917.1 MGP_129S1SvImJ_G0011006.1 mouse_genomes_project 13 27969945 27970068 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017376.1 MGP_129S1SvImJ_G0015249.1 mouse_genomes_project 13 20718275 20785230 + 4930586N03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0011384.1 MGP_129S1SvImJ_G0009500.1 mouse_genomes_project 13 110805492 110805685 - Gm28016 misc_RNA misc_RNA MGP_129S1SvImJ_T0037581.1 MGP_129S1SvImJ_G0020757.1 mouse_genomes_project 13 74501840 74523781 + Tppp protein_coding processed_transcript MGP_129S1SvImJ_T0037582.1 MGP_129S1SvImJ_G0020757.1 mouse_genomes_project 13 74501852 74528163 + MGP_129S1SvImJ_P0037582 Tppp protein_coding protein_coding MGP_129S1SvImJ_T0037583.1 MGP_129S1SvImJ_G0020757.1 mouse_genomes_project 13 74501866 74513876 + Tppp protein_coding retained_intron MGP_129S1SvImJ_T0037584.1 MGP_129S1SvImJ_G0020757.1 mouse_genomes_project 13 74523159 74526009 + Tppp protein_coding processed_transcript MGP_129S1SvImJ_T0036703.1 MGP_129S1SvImJ_G0020435.1 mouse_genomes_project 13 31212130 31223285 + MGP_129S1SvImJ_P0036703 protein_coding protein_coding MGP_129S1SvImJ_T0036528.1 MGP_129S1SvImJ_G0020356.1 mouse_genomes_project 13 21117663 21126411 + MGP_129S1SvImJ_P0036528 Hist1h2bg protein_coding protein_coding MGP_129S1SvImJ_T0037812.1 MGP_129S1SvImJ_G0020818.1 mouse_genomes_project 13 93890198 93891800 - MGP_129S1SvImJ_P0037812 Spz1 protein_coding protein_coding MGP_129S1SvImJ_T0037962.1 MGP_129S1SvImJ_G0020878.1 mouse_genomes_project 13 101765393 101840683 - MGP_129S1SvImJ_P0037962 Mccc2 protein_coding protein_coding MGP_129S1SvImJ_T0102227.1 MGP_129S1SvImJ_G0040061.1 mouse_genomes_project 13 31858076 31861474 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0037226.1 MGP_129S1SvImJ_G0020608.1 mouse_genomes_project 13 55193167 55206473 + MGP_129S1SvImJ_P0037226 B230219D22Rik protein_coding protein_coding MGP_129S1SvImJ_T0036965.1 MGP_129S1SvImJ_G0020533.1 mouse_genomes_project 13 48228812 48277941 - MGP_129S1SvImJ_P0036965 Fgd3 protein_coding protein_coding MGP_129S1SvImJ_T0036966.1 MGP_129S1SvImJ_G0020533.1 mouse_genomes_project 13 48230368 48267747 - MGP_129S1SvImJ_P0036966 Fgd3 protein_coding protein_coding MGP_129S1SvImJ_T0036967.1 MGP_129S1SvImJ_G0020533.1 mouse_genomes_project 13 48242107 48288950 - MGP_129S1SvImJ_P0036967 Fgd3 protein_coding protein_coding MGP_129S1SvImJ_T0036391.1 MGP_129S1SvImJ_G0020262.1 mouse_genomes_project 13 16915483 16921008 - MGP_129S1SvImJ_P0036391 A530099J19Rik protein_coding protein_coding MGP_129S1SvImJ_T0036862.1 MGP_129S1SvImJ_G0020500.1 mouse_genomes_project 13 41998507 42079057 - MGP_129S1SvImJ_P0036862 protein_coding protein_coding MGP_129S1SvImJ_T0012923.1 MGP_129S1SvImJ_G0011012.1 mouse_genomes_project 13 29828490 29830616 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006612.1 MGP_129S1SvImJ_G0005483.1 mouse_genomes_project 13 81694962 81701001 - Gm4211 lincRNA lincRNA MGP_129S1SvImJ_T0009974.1 MGP_129S1SvImJ_G0008090.1 mouse_genomes_project 13 95165110 95165171 + Mir5624 miRNA miRNA MGP_129S1SvImJ_T0038250.1 MGP_129S1SvImJ_G0020970.1 mouse_genomes_project 13 122446161 122479016 + MGP_129S1SvImJ_P0038250 Paip1 protein_coding protein_coding MGP_129S1SvImJ_T0038251.1 MGP_129S1SvImJ_G0020970.1 mouse_genomes_project 13 122446349 122478120 + MGP_129S1SvImJ_P0038251 Paip1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038252.1 MGP_129S1SvImJ_G0020970.1 mouse_genomes_project 13 122446363 122478006 + MGP_129S1SvImJ_P0038252 Paip1 protein_coding protein_coding MGP_129S1SvImJ_T0038253.1 MGP_129S1SvImJ_G0020970.1 mouse_genomes_project 13 122446363 122481139 + MGP_129S1SvImJ_P0038253 Paip1 protein_coding protein_coding MGP_129S1SvImJ_T0038254.1 MGP_129S1SvImJ_G0020970.1 mouse_genomes_project 13 122446388 122468988 + MGP_129S1SvImJ_P0038254 Paip1 protein_coding protein_coding MGP_129S1SvImJ_T0038255.1 MGP_129S1SvImJ_G0020970.1 mouse_genomes_project 13 122459982 122477823 + MGP_129S1SvImJ_P0038255 Paip1 protein_coding protein_coding MGP_129S1SvImJ_T0038256.1 MGP_129S1SvImJ_G0020970.1 mouse_genomes_project 13 122468475 122469999 + Paip1 protein_coding retained_intron MGP_129S1SvImJ_T0036646.1 MGP_129S1SvImJ_G0020410.1 mouse_genomes_project 13 26995847 27692123 - MGP_129S1SvImJ_P0036646 Cdkal1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036647.1 MGP_129S1SvImJ_G0020410.1 mouse_genomes_project 13 27143155 27692128 - MGP_129S1SvImJ_P0036647 Cdkal1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0036648.1 MGP_129S1SvImJ_G0020410.1 mouse_genomes_project 13 27143155 27692150 - MGP_129S1SvImJ_P0036648 Cdkal1 protein_coding protein_coding MGP_129S1SvImJ_T0036649.1 MGP_129S1SvImJ_G0020410.1 mouse_genomes_project 13 27223830 27295131 - MGP_129S1SvImJ_P0036649 Cdkal1 protein_coding protein_coding MGP_129S1SvImJ_T0036650.1 MGP_129S1SvImJ_G0020410.1 mouse_genomes_project 13 27264325 27339248 - MGP_129S1SvImJ_P0036650 Cdkal1 protein_coding protein_coding MGP_129S1SvImJ_T0036651.1 MGP_129S1SvImJ_G0020410.1 mouse_genomes_project 13 27294390 27692119 - Cdkal1 protein_coding retained_intron MGP_129S1SvImJ_T0036652.1 MGP_129S1SvImJ_G0020410.1 mouse_genomes_project 13 27336000 27692119 - Cdkal1 protein_coding retained_intron MGP_129S1SvImJ_T0036653.1 MGP_129S1SvImJ_G0020410.1 mouse_genomes_project 13 27345598 27692115 - MGP_129S1SvImJ_P0036653 Cdkal1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036654.1 MGP_129S1SvImJ_G0020410.1 mouse_genomes_project 13 27536472 27692133 - Cdkal1 protein_coding retained_intron MGP_129S1SvImJ_T0036655.1 MGP_129S1SvImJ_G0020410.1 mouse_genomes_project 13 27606946 27691907 - MGP_129S1SvImJ_P0036655 Cdkal1 protein_coding protein_coding MGP_129S1SvImJ_T0036656.1 MGP_129S1SvImJ_G0020410.1 mouse_genomes_project 13 27631853 27692139 - MGP_129S1SvImJ_P0036656 Cdkal1 protein_coding protein_coding MGP_129S1SvImJ_T0036657.1 MGP_129S1SvImJ_G0020410.1 mouse_genomes_project 13 27669976 27692141 - MGP_129S1SvImJ_P0036657 Cdkal1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037837.1 MGP_129S1SvImJ_G0020829.1 mouse_genomes_project 13 95142988 95334246 + MGP_129S1SvImJ_P0037837 Arsb protein_coding protein_coding MGP_129S1SvImJ_T0017393.1 MGP_129S1SvImJ_G0015258.1 mouse_genomes_project 13 69887818 69892222 - Gm17108 processed_transcript processed_transcript MGP_129S1SvImJ_T0003478.1 MGP_129S1SvImJ_G0003189.1 mouse_genomes_project 13 55092417 55095020 - Gm15911 antisense antisense MGP_129S1SvImJ_T0012910.1 MGP_129S1SvImJ_G0010999.1 mouse_genomes_project 13 23765635 23766152 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036804.1 MGP_129S1SvImJ_G0020476.1 mouse_genomes_project 13 37311740 37341527 - MGP_129S1SvImJ_P0036804 Slc35b3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0036805.1 MGP_129S1SvImJ_G0020476.1 mouse_genomes_project 13 37311748 37341546 - MGP_129S1SvImJ_P0036805 Slc35b3 protein_coding protein_coding MGP_129S1SvImJ_T0036806.1 MGP_129S1SvImJ_G0020476.1 mouse_genomes_project 13 37311748 37341884 - MGP_129S1SvImJ_P0036806 Slc35b3 protein_coding protein_coding MGP_129S1SvImJ_T0102228.1 MGP_129S1SvImJ_G0040062.1 mouse_genomes_project 13 31895357 31897901 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0037579.1 MGP_129S1SvImJ_G0020755.1 mouse_genomes_project 13 74453348 74485530 + MGP_129S1SvImJ_P0037579 Zdhhc11 protein_coding protein_coding MGP_129S1SvImJ_T0036446.1 MGP_129S1SvImJ_G0020293.1 mouse_genomes_project 13 19014667 19017440 + MGP_129S1SvImJ_P0036446 Hist1h4j protein_coding protein_coding MGP_129S1SvImJ_T0037442.1 MGP_129S1SvImJ_G0020689.1 mouse_genomes_project 13 65296742 65298030 + MGP_129S1SvImJ_P0037442 Gm10775 protein_coding protein_coding MGP_129S1SvImJ_T0038267.1 MGP_129S1SvImJ_G0020978.1 mouse_genomes_project 13 122708808 122734463 - MGP_129S1SvImJ_P0038267 Zfp131 protein_coding protein_coding MGP_129S1SvImJ_T0038268.1 MGP_129S1SvImJ_G0020978.1 mouse_genomes_project 13 122708808 122734463 - MGP_129S1SvImJ_P0038268 Zfp131 protein_coding protein_coding MGP_129S1SvImJ_T0102214.1 MGP_129S1SvImJ_G0040048.1 mouse_genomes_project 13 21791144 21792207 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102203.1 MGP_129S1SvImJ_G0040037.1 mouse_genomes_project 13 20221389 20222429 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002618.1 MGP_129S1SvImJ_G0002516.1 mouse_genomes_project 13 16491051 16491517 + MGP_129S1SvImJ_P0002618 Gm16602 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0012916.1 MGP_129S1SvImJ_G0011005.1 mouse_genomes_project 13 26932075 26932584 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006533.1 MGP_129S1SvImJ_G0005429.1 mouse_genomes_project 13 23853284 23881496 - 1700092E19Rik lincRNA lincRNA MGP_129S1SvImJ_T0006534.1 MGP_129S1SvImJ_G0005429.1 mouse_genomes_project 13 23874879 23881437 - 1700092E19Rik lincRNA lincRNA MGP_129S1SvImJ_T0037361.1 MGP_129S1SvImJ_G0020655.1 mouse_genomes_project 13 60719696 60722937 - MGP_129S1SvImJ_P0037361 Tpbpa protein_coding protein_coding MGP_129S1SvImJ_T0036973.1 MGP_129S1SvImJ_G0020537.1 mouse_genomes_project 13 48483312 48510181 + MGP_129S1SvImJ_P0036973 Ecm2 protein_coding protein_coding MGP_129S1SvImJ_T0098485.1 MGP_129S1SvImJ_G0036570.1 mouse_genomes_project 13 21115991 21116099 - Gm24991 rRNA rRNA MGP_129S1SvImJ_T0036451.1 MGP_129S1SvImJ_G0020298.1 mouse_genomes_project 13 19064900 19066953 - MGP_129S1SvImJ_P0036451 Hist1h2ap protein_coding protein_coding MGP_129S1SvImJ_T0036194.1 MGP_129S1SvImJ_G0020197.1 mouse_genomes_project 13 331291 332316 + MGP_129S1SvImJ_P0036194 Calm4 protein_coding protein_coding MGP_129S1SvImJ_T0006601.1 MGP_129S1SvImJ_G0005474.1 mouse_genomes_project 13 63248096 63257229 - Gm16907 lincRNA lincRNA MGP_129S1SvImJ_T0037242.1 MGP_129S1SvImJ_G0020614.1 mouse_genomes_project 13 55703941 55709082 - MGP_129S1SvImJ_P0037242 Tifab protein_coding protein_coding MGP_129S1SvImJ_T0038056.1 MGP_129S1SvImJ_G0020901.1 mouse_genomes_project 13 105907411 106014173 - MGP_129S1SvImJ_P0038056 Erbin protein_coding protein_coding MGP_129S1SvImJ_T0038057.1 MGP_129S1SvImJ_G0020901.1 mouse_genomes_project 13 105907415 105982201 - MGP_129S1SvImJ_P0038057 Erbin protein_coding protein_coding MGP_129S1SvImJ_T0038058.1 MGP_129S1SvImJ_G0020901.1 mouse_genomes_project 13 105907415 106013954 - MGP_129S1SvImJ_P0038058 Erbin protein_coding protein_coding MGP_129S1SvImJ_T0038059.1 MGP_129S1SvImJ_G0020901.1 mouse_genomes_project 13 105908231 106013954 - MGP_129S1SvImJ_P0038059 Erbin protein_coding protein_coding MGP_129S1SvImJ_T0038060.1 MGP_129S1SvImJ_G0020901.1 mouse_genomes_project 13 105908231 106013954 - MGP_129S1SvImJ_P0038060 Erbin protein_coding protein_coding MGP_129S1SvImJ_T0038061.1 MGP_129S1SvImJ_G0020901.1 mouse_genomes_project 13 105908231 106013954 - MGP_129S1SvImJ_P0038061 Erbin protein_coding protein_coding MGP_129S1SvImJ_T0038062.1 MGP_129S1SvImJ_G0020901.1 mouse_genomes_project 13 105930507 106014173 - Erbin protein_coding retained_intron MGP_129S1SvImJ_T0036483.1 MGP_129S1SvImJ_G0020319.1 mouse_genomes_project 13 19716148 19717252 + MGP_129S1SvImJ_P0036483 Vmn1r199 protein_coding protein_coding MGP_129S1SvImJ_T0037898.1 MGP_129S1SvImJ_G0020853.1 mouse_genomes_project 13 98204845 98226852 - MGP_129S1SvImJ_P0037898 Hmgcr protein_coding protein_coding MGP_129S1SvImJ_T0037899.1 MGP_129S1SvImJ_G0020853.1 mouse_genomes_project 13 98206146 98222592 - MGP_129S1SvImJ_P0037899 Hmgcr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037900.1 MGP_129S1SvImJ_G0020853.1 mouse_genomes_project 13 98206313 98208657 - MGP_129S1SvImJ_P0037900 Hmgcr protein_coding protein_coding MGP_129S1SvImJ_T0037901.1 MGP_129S1SvImJ_G0020853.1 mouse_genomes_project 13 98207219 98222539 - MGP_129S1SvImJ_P0037901 Hmgcr protein_coding protein_coding MGP_129S1SvImJ_T0037902.1 MGP_129S1SvImJ_G0020853.1 mouse_genomes_project 13 98207986 98212517 - MGP_129S1SvImJ_P0037902 Hmgcr protein_coding protein_coding MGP_129S1SvImJ_T0037903.1 MGP_129S1SvImJ_G0020853.1 mouse_genomes_project 13 98214720 98226791 - Hmgcr protein_coding retained_intron MGP_129S1SvImJ_T0037904.1 MGP_129S1SvImJ_G0020853.1 mouse_genomes_project 13 98215986 98226739 - MGP_129S1SvImJ_P0037904 Hmgcr protein_coding protein_coding MGP_129S1SvImJ_T0037905.1 MGP_129S1SvImJ_G0020853.1 mouse_genomes_project 13 98221534 98222416 - Hmgcr protein_coding retained_intron MGP_129S1SvImJ_T0037906.1 MGP_129S1SvImJ_G0020853.1 mouse_genomes_project 13 98221944 98225477 - MGP_129S1SvImJ_P0037906 Hmgcr protein_coding protein_coding MGP_129S1SvImJ_T0037907.1 MGP_129S1SvImJ_G0020853.1 mouse_genomes_project 13 98221949 98226384 - MGP_129S1SvImJ_P0037907 Hmgcr protein_coding protein_coding MGP_129S1SvImJ_T0037908.1 MGP_129S1SvImJ_G0020853.1 mouse_genomes_project 13 98222147 98226764 - Hmgcr protein_coding retained_intron MGP_129S1SvImJ_T0006640.1 MGP_129S1SvImJ_G0005501.1 mouse_genomes_project 13 101194713 101199565 - lincRNA lincRNA MGP_129S1SvImJ_T0036517.1 MGP_129S1SvImJ_G0020347.1 mouse_genomes_project 13 20955509 20956068 - MGP_129S1SvImJ_P0036517 Hist1h2bh protein_coding protein_coding MGP_129S1SvImJ_T0036819.1 MGP_129S1SvImJ_G0020482.1 mouse_genomes_project 13 39496776 39504739 + MGP_129S1SvImJ_P0036819 Tmem14c protein_coding protein_coding MGP_129S1SvImJ_T0037244.1 MGP_129S1SvImJ_G0020616.1 mouse_genomes_project 13 55826930 55834836 - MGP_129S1SvImJ_P0037244 Cxcl14 protein_coding protein_coding MGP_129S1SvImJ_T0037277.1 MGP_129S1SvImJ_G0020628.1 mouse_genomes_project 13 57784667 57790779 + MGP_129S1SvImJ_P0037277 Idnk protein_coding protein_coding MGP_129S1SvImJ_T0037506.1 MGP_129S1SvImJ_G0020719.1 mouse_genomes_project 13 67869492 67896670 - MGP_129S1SvImJ_P0037506 Zfp65 protein_coding protein_coding MGP_129S1SvImJ_T0037884.1 MGP_129S1SvImJ_G0020847.1 mouse_genomes_project 13 97582545 97583387 + protein_coding translated_processed_pseudogene MGP_129S1SvImJ_T0036663.1 MGP_129S1SvImJ_G0020413.1 mouse_genomes_project 13 28195996 28207363 + Agtr1a protein_coding processed_transcript MGP_129S1SvImJ_T0036664.1 MGP_129S1SvImJ_G0020413.1 mouse_genomes_project 13 28195996 28237254 + MGP_129S1SvImJ_P0036664 Agtr1a protein_coding protein_coding MGP_129S1SvImJ_T0003482.1 MGP_129S1SvImJ_G0003191.1 mouse_genomes_project 13 57913945 57931747 + Gm26555 antisense antisense MGP_129S1SvImJ_T0003483.1 MGP_129S1SvImJ_G0003191.1 mouse_genomes_project 13 57913945 57929190 + Gm26555 antisense antisense MGP_129S1SvImJ_T0003484.1 MGP_129S1SvImJ_G0003191.1 mouse_genomes_project 13 57913953 57931748 + Gm26555 antisense antisense MGP_129S1SvImJ_T0009981.1 MGP_129S1SvImJ_G0008097.1 mouse_genomes_project 13 112283518 112283598 + Mir1904 miRNA miRNA MGP_129S1SvImJ_T0012885.1 MGP_129S1SvImJ_G0010974.1 mouse_genomes_project 13 18637961 18638401 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036901.1 MGP_129S1SvImJ_G0020515.1 mouse_genomes_project 13 45454845 45503648 - MGP_129S1SvImJ_P0036901 Nup153 protein_coding protein_coding MGP_129S1SvImJ_T0036902.1 MGP_129S1SvImJ_G0020515.1 mouse_genomes_project 13 45456015 45456893 - Nup153 protein_coding retained_intron MGP_129S1SvImJ_T0036903.1 MGP_129S1SvImJ_G0020515.1 mouse_genomes_project 13 45457785 45458958 - Nup153 protein_coding retained_intron MGP_129S1SvImJ_T0036904.1 MGP_129S1SvImJ_G0020515.1 mouse_genomes_project 13 45474614 45477090 - Nup153 protein_coding retained_intron MGP_129S1SvImJ_T0036905.1 MGP_129S1SvImJ_G0020515.1 mouse_genomes_project 13 45485689 45493031 - Nup153 protein_coding processed_transcript MGP_129S1SvImJ_T0011374.1 MGP_129S1SvImJ_G0009490.1 mouse_genomes_project 13 53824348 53824608 - Gm22668 misc_RNA misc_RNA MGP_129S1SvImJ_T0102192.1 MGP_129S1SvImJ_G0040026.1 mouse_genomes_project 13 19767775 19770008 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0036840.1 MGP_129S1SvImJ_G0020494.1 mouse_genomes_project 13 40830841 40837557 + MGP_129S1SvImJ_P0036840 Edn1 protein_coding protein_coding MGP_129S1SvImJ_T0038265.1 MGP_129S1SvImJ_G0020977.1 mouse_genomes_project 13 122653780 122701361 - MGP_129S1SvImJ_P0038265 Nim1k protein_coding protein_coding MGP_129S1SvImJ_T0038266.1 MGP_129S1SvImJ_G0020977.1 mouse_genomes_project 13 122668649 122683620 - MGP_129S1SvImJ_P0038266 Nim1k protein_coding protein_coding MGP_129S1SvImJ_T0009973.1 MGP_129S1SvImJ_G0008089.1 mouse_genomes_project 13 93043471 93043551 + Gm27656 miRNA miRNA MGP_129S1SvImJ_T0037894.1 MGP_129S1SvImJ_G0020851.1 mouse_genomes_project 13 98026667 98027055 + MGP_129S1SvImJ_P0037894 Gm17622 protein_coding protein_coding MGP_129S1SvImJ_T0012914.1 MGP_129S1SvImJ_G0011003.1 mouse_genomes_project 13 24932180 24933134 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0037245.1 MGP_129S1SvImJ_G0020617.1 mouse_genomes_project 13 55910343 55913084 + MGP_129S1SvImJ_P0037245 Gm10782 protein_coding protein_coding MGP_129S1SvImJ_T0036989.1 MGP_129S1SvImJ_G0020544.1 mouse_genomes_project 13 48968601 48968841 - MGP_129S1SvImJ_P0036989 protein_coding protein_coding MGP_129S1SvImJ_T0036551.1 MGP_129S1SvImJ_G0020372.1 mouse_genomes_project 13 21347094 21364259 - MGP_129S1SvImJ_P0036551 Slc17a4 protein_coding protein_coding MGP_129S1SvImJ_T0036552.1 MGP_129S1SvImJ_G0020372.1 mouse_genomes_project 13 21347245 21364261 - MGP_129S1SvImJ_P0036552 Slc17a4 protein_coding protein_coding MGP_129S1SvImJ_T0100655.1 MGP_129S1SvImJ_G0038722.1 mouse_genomes_project 13 96789998 96790130 + Gm22661 snoRNA snoRNA MGP_129S1SvImJ_T0037033.1 MGP_129S1SvImJ_G0020557.1 mouse_genomes_project 13 51860223 51926418 + MGP_129S1SvImJ_P0037033 Syk protein_coding protein_coding MGP_129S1SvImJ_T0037034.1 MGP_129S1SvImJ_G0020557.1 mouse_genomes_project 13 51860487 51921252 + MGP_129S1SvImJ_P0037034 Syk protein_coding protein_coding MGP_129S1SvImJ_T0037035.1 MGP_129S1SvImJ_G0020557.1 mouse_genomes_project 13 51860553 51890804 + Syk protein_coding retained_intron MGP_129S1SvImJ_T0037036.1 MGP_129S1SvImJ_G0020557.1 mouse_genomes_project 13 51873871 51926408 + MGP_129S1SvImJ_P0037036 Syk protein_coding protein_coding MGP_129S1SvImJ_T0037037.1 MGP_129S1SvImJ_G0020557.1 mouse_genomes_project 13 51873977 51901449 + Syk protein_coding retained_intron MGP_129S1SvImJ_T0037174.1 MGP_129S1SvImJ_G0020589.1 mouse_genomes_project 13 54787896 54790654 - MGP_129S1SvImJ_P0037174 Rab24 protein_coding protein_coding MGP_129S1SvImJ_T0100637.1 MGP_129S1SvImJ_G0038704.1 mouse_genomes_project 13 50869850 50869986 + Gm22806 snoRNA snoRNA MGP_129S1SvImJ_T0036435.1 MGP_129S1SvImJ_G0020285.1 mouse_genomes_project 13 18847712 18857009 - MGP_129S1SvImJ_P0036435 Olfr1364 protein_coding protein_coding MGP_129S1SvImJ_T0036436.1 MGP_129S1SvImJ_G0020285.1 mouse_genomes_project 13 18847712 18848657 - MGP_129S1SvImJ_P0036436 Olfr1364 protein_coding protein_coding MGP_129S1SvImJ_T0099351.1 MGP_129S1SvImJ_G0037418.1 mouse_genomes_project 13 18752620 18752684 - Gm23779 snRNA snRNA MGP_129S1SvImJ_T0102206.1 MGP_129S1SvImJ_G0040040.1 mouse_genomes_project 13 20407093 20407383 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0101624.1 MGP_129S1SvImJ_G0039664.1 mouse_genomes_project 13 32137690 32141775 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101625.1 MGP_129S1SvImJ_G0039664.1 mouse_genomes_project 13 32139107 32139664 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0017398.1 MGP_129S1SvImJ_G0015262.1 mouse_genomes_project 13 114089382 114154216 + Gm15286 processed_transcript processed_transcript MGP_129S1SvImJ_T0017399.1 MGP_129S1SvImJ_G0015262.1 mouse_genomes_project 13 114125905 114152221 + Gm15286 processed_transcript processed_transcript MGP_129S1SvImJ_T0037504.1 MGP_129S1SvImJ_G0020717.1 mouse_genomes_project 13 67781981 67888320 - MGP_129S1SvImJ_P0037504 protein_coding protein_coding MGP_129S1SvImJ_T0006543.1 MGP_129S1SvImJ_G0005435.1 mouse_genomes_project 13 29112515 29121200 - 4930401O12Rik lincRNA lincRNA MGP_129S1SvImJ_T0000916.1 MGP_129S1SvImJ_G0000848.1 mouse_genomes_project 13 91597211 91598106 - TEC TEC MGP_129S1SvImJ_T0012965.1 MGP_129S1SvImJ_G0011054.1 mouse_genomes_project 13 94481463 94523270 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036990.1 MGP_129S1SvImJ_G0020545.1 mouse_genomes_project 13 49549810 49565713 + MGP_129S1SvImJ_P0036990 Fbxw17 protein_coding protein_coding MGP_129S1SvImJ_T0036991.1 MGP_129S1SvImJ_G0020545.1 mouse_genomes_project 13 49549827 49557600 + MGP_129S1SvImJ_P0036991 Fbxw17 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036992.1 MGP_129S1SvImJ_G0020545.1 mouse_genomes_project 13 49549832 49562201 + Fbxw17 protein_coding processed_transcript MGP_129S1SvImJ_T0036993.1 MGP_129S1SvImJ_G0020545.1 mouse_genomes_project 13 49549832 49565724 + MGP_129S1SvImJ_P0036993 Fbxw17 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036994.1 MGP_129S1SvImJ_G0020545.1 mouse_genomes_project 13 49549841 49552226 + Fbxw17 protein_coding retained_intron MGP_129S1SvImJ_T0036995.1 MGP_129S1SvImJ_G0020545.1 mouse_genomes_project 13 49555798 49559234 + Fbxw17 protein_coding processed_transcript MGP_129S1SvImJ_T0036996.1 MGP_129S1SvImJ_G0020545.1 mouse_genomes_project 13 49561913 49564054 + Fbxw17 protein_coding retained_intron MGP_129S1SvImJ_T0036997.1 MGP_129S1SvImJ_G0020545.1 mouse_genomes_project 13 49563064 49565720 + Fbxw17 protein_coding retained_intron MGP_129S1SvImJ_T0036998.1 MGP_129S1SvImJ_G0020545.1 mouse_genomes_project 13 49563114 49564320 + Fbxw17 protein_coding retained_intron MGP_129S1SvImJ_T0036999.1 MGP_129S1SvImJ_G0020545.1 mouse_genomes_project 13 49563300 49564183 + Fbxw17 protein_coding retained_intron MGP_129S1SvImJ_T0037000.1 MGP_129S1SvImJ_G0020545.1 mouse_genomes_project 13 49563619 49564297 + Fbxw17 protein_coding retained_intron MGP_129S1SvImJ_T0037001.1 MGP_129S1SvImJ_G0020545.1 mouse_genomes_project 13 49563654 49565713 + MGP_129S1SvImJ_P0037001 Fbxw17 protein_coding protein_coding MGP_129S1SvImJ_T0037002.1 MGP_129S1SvImJ_G0020545.1 mouse_genomes_project 13 49564128 49565707 + MGP_129S1SvImJ_P0037002 Fbxw17 protein_coding protein_coding MGP_129S1SvImJ_T0036628.1 MGP_129S1SvImJ_G0020398.1 mouse_genomes_project 13 25055145 25062488 - MGP_129S1SvImJ_P0036628 Prl8a6 protein_coding protein_coding MGP_129S1SvImJ_T0036629.1 MGP_129S1SvImJ_G0020398.1 mouse_genomes_project 13 25055145 25062448 - MGP_129S1SvImJ_P0036629 Prl8a6 protein_coding protein_coding MGP_129S1SvImJ_T0036630.1 MGP_129S1SvImJ_G0020398.1 mouse_genomes_project 13 25055332 25062397 - MGP_129S1SvImJ_P0036630 Prl8a6 protein_coding protein_coding MGP_129S1SvImJ_T0006602.1 MGP_129S1SvImJ_G0005475.1 mouse_genomes_project 13 67709316 67717331 + 9430065F17Rik lincRNA lincRNA MGP_129S1SvImJ_T0006603.1 MGP_129S1SvImJ_G0005475.1 mouse_genomes_project 13 67709345 67719267 + 9430065F17Rik lincRNA lincRNA MGP_129S1SvImJ_T0037573.1 MGP_129S1SvImJ_G0020752.1 mouse_genomes_project 13 74300779 74329762 - MGP_129S1SvImJ_P0037573 Nkd2 protein_coding protein_coding MGP_129S1SvImJ_T0037574.1 MGP_129S1SvImJ_G0020752.1 mouse_genomes_project 13 74301939 74329743 - MGP_129S1SvImJ_P0037574 Nkd2 protein_coding protein_coding MGP_129S1SvImJ_T0037575.1 MGP_129S1SvImJ_G0020752.1 mouse_genomes_project 13 74305782 74329743 - Nkd2 protein_coding retained_intron MGP_129S1SvImJ_T0038066.1 MGP_129S1SvImJ_G0020904.1 mouse_genomes_project 13 106230081 106269122 - MGP_129S1SvImJ_P0038066 Trappc13 protein_coding protein_coding MGP_129S1SvImJ_T0038067.1 MGP_129S1SvImJ_G0020904.1 mouse_genomes_project 13 106230088 106269078 - MGP_129S1SvImJ_P0038067 Trappc13 protein_coding protein_coding MGP_129S1SvImJ_T0038068.1 MGP_129S1SvImJ_G0020904.1 mouse_genomes_project 13 106232745 106269076 - MGP_129S1SvImJ_P0038068 Trappc13 protein_coding protein_coding MGP_129S1SvImJ_T0038069.1 MGP_129S1SvImJ_G0020904.1 mouse_genomes_project 13 106233382 106269060 - MGP_129S1SvImJ_P0038069 Trappc13 protein_coding protein_coding MGP_129S1SvImJ_T0038070.1 MGP_129S1SvImJ_G0020904.1 mouse_genomes_project 13 106255749 106269112 - Trappc13 protein_coding retained_intron MGP_129S1SvImJ_T0038071.1 MGP_129S1SvImJ_G0020904.1 mouse_genomes_project 13 106264376 106269092 - Trappc13 protein_coding processed_transcript MGP_129S1SvImJ_T0037879.1 MGP_129S1SvImJ_G0020844.1 mouse_genomes_project 13 97112815 97390196 - MGP_129S1SvImJ_P0037879 Iqgap2 protein_coding protein_coding MGP_129S1SvImJ_T0038264.1 MGP_129S1SvImJ_G0020976.1 mouse_genomes_project 13 122630052 122648253 + MGP_129S1SvImJ_P0038264 Hmgcs1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0037447.1 MGP_129S1SvImJ_G0020691.1 mouse_genomes_project 13 67005356 67010117 - MGP_129S1SvImJ_P0037447 Uqcrb protein_coding protein_coding MGP_129S1SvImJ_T0037448.1 MGP_129S1SvImJ_G0020691.1 mouse_genomes_project 13 67005800 67007520 - Uqcrb protein_coding processed_transcript MGP_129S1SvImJ_T0009942.1 MGP_129S1SvImJ_G0008058.1 mouse_genomes_project 13 26470343 26470436 - Mir6368 miRNA miRNA MGP_129S1SvImJ_T0036741.1 MGP_129S1SvImJ_G0020450.1 mouse_genomes_project 13 32285221 32455434 - MGP_129S1SvImJ_P0036741 Slc22a23 protein_coding protein_coding MGP_129S1SvImJ_T0036742.1 MGP_129S1SvImJ_G0020450.1 mouse_genomes_project 13 32285224 32455049 - MGP_129S1SvImJ_P0036742 Slc22a23 protein_coding protein_coding MGP_129S1SvImJ_T0036743.1 MGP_129S1SvImJ_G0020450.1 mouse_genomes_project 13 32288930 32299595 - Slc22a23 protein_coding retained_intron MGP_129S1SvImJ_T0036744.1 MGP_129S1SvImJ_G0020450.1 mouse_genomes_project 13 32310081 32454847 - MGP_129S1SvImJ_P0036744 Slc22a23 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036745.1 MGP_129S1SvImJ_G0020450.1 mouse_genomes_project 13 32327431 32454455 - Slc22a23 protein_coding processed_transcript MGP_129S1SvImJ_T0037834.1 MGP_129S1SvImJ_G0020827.1 mouse_genomes_project 13 95014647 95033870 - MGP_129S1SvImJ_P0037834 Bhmt2 protein_coding protein_coding MGP_129S1SvImJ_T0037030.1 MGP_129S1SvImJ_G0020555.1 mouse_genomes_project 13 51100469 51102260 + MGP_129S1SvImJ_P0037030 Gadd45g protein_coding protein_coding MGP_129S1SvImJ_T0037031.1 MGP_129S1SvImJ_G0020555.1 mouse_genomes_project 13 51100535 51102016 + Gadd45g protein_coding retained_intron MGP_129S1SvImJ_T0036864.1 MGP_129S1SvImJ_G0020502.1 mouse_genomes_project 13 42222254 42281126 + MGP_129S1SvImJ_P0036864 Rnf182 protein_coding protein_coding MGP_129S1SvImJ_T0036865.1 MGP_129S1SvImJ_G0020502.1 mouse_genomes_project 13 42222527 42278242 + MGP_129S1SvImJ_P0036865 Rnf182 protein_coding protein_coding MGP_129S1SvImJ_T0036484.1 MGP_129S1SvImJ_G0020320.1 mouse_genomes_project 13 19728400 19729339 + MGP_129S1SvImJ_P0036484 Vmn1r200 protein_coding protein_coding MGP_129S1SvImJ_T0012888.1 MGP_129S1SvImJ_G0010977.1 mouse_genomes_project 13 19211760 19213389 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011373.1 MGP_129S1SvImJ_G0009489.1 mouse_genomes_project 13 50195922 50196048 + Gm22199 misc_RNA misc_RNA MGP_129S1SvImJ_T0037063.1 MGP_129S1SvImJ_G0020568.1 mouse_genomes_project 13 53859205 53869219 - MGP_129S1SvImJ_P0037063 Thoc3 protein_coding protein_coding MGP_129S1SvImJ_T0037064.1 MGP_129S1SvImJ_G0020568.1 mouse_genomes_project 13 53864050 53869158 - Thoc3 protein_coding processed_transcript MGP_129S1SvImJ_T0037065.1 MGP_129S1SvImJ_G0020568.1 mouse_genomes_project 13 53868172 53869196 - Thoc3 protein_coding retained_intron MGP_129S1SvImJ_T0036807.1 MGP_129S1SvImJ_G0020477.1 mouse_genomes_project 13 38408783 38707898 - MGP_129S1SvImJ_P0036807 Ofcc1 protein_coding protein_coding MGP_129S1SvImJ_T0037756.1 MGP_129S1SvImJ_G0020802.1 mouse_genomes_project 13 91296220 91319345 + MGP_129S1SvImJ_P0037756 Tmem167 protein_coding protein_coding MGP_129S1SvImJ_T0037757.1 MGP_129S1SvImJ_G0020802.1 mouse_genomes_project 13 91296831 91353275 + MGP_129S1SvImJ_P0037757 Tmem167 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0037758.1 MGP_129S1SvImJ_G0020802.1 mouse_genomes_project 13 91296859 91311749 + MGP_129S1SvImJ_P0037758 Tmem167 protein_coding protein_coding MGP_129S1SvImJ_T0037214.1 MGP_129S1SvImJ_G0020603.1 mouse_genomes_project 13 55028845 55060645 - MGP_129S1SvImJ_P0037214 Fam193b protein_coding protein_coding MGP_129S1SvImJ_T0036393.1 MGP_129S1SvImJ_G0020264.1 mouse_genomes_project 13 17298945 17483893 + Elmo1 protein_coding retained_intron MGP_129S1SvImJ_T0036394.1 MGP_129S1SvImJ_G0020264.1 mouse_genomes_project 13 17298968 17855013 + MGP_129S1SvImJ_P0036394 Elmo1 protein_coding protein_coding MGP_129S1SvImJ_T0036395.1 MGP_129S1SvImJ_G0020264.1 mouse_genomes_project 13 17319714 17568691 + Elmo1 protein_coding retained_intron MGP_129S1SvImJ_T0036396.1 MGP_129S1SvImJ_G0020264.1 mouse_genomes_project 13 17711318 17840173 + Elmo1 protein_coding retained_intron MGP_129S1SvImJ_T0012976.1 MGP_129S1SvImJ_G0011065.1 mouse_genomes_project 13 114392014 114393799 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0037734.1 MGP_129S1SvImJ_G0020798.1 mouse_genomes_project 13 89919711 90321409 + MGP_129S1SvImJ_P0037734 Edil3 protein_coding protein_coding MGP_129S1SvImJ_T0037735.1 MGP_129S1SvImJ_G0020798.1 mouse_genomes_project 13 89919727 90253960 + Edil3 protein_coding processed_transcript MGP_129S1SvImJ_T0037736.1 MGP_129S1SvImJ_G0020798.1 mouse_genomes_project 13 89919750 90464646 + MGP_129S1SvImJ_P0037736 Edil3 protein_coding protein_coding MGP_129S1SvImJ_T0037737.1 MGP_129S1SvImJ_G0020798.1 mouse_genomes_project 13 89919796 90082405 + Edil3 protein_coding retained_intron MGP_129S1SvImJ_T0037738.1 MGP_129S1SvImJ_G0020798.1 mouse_genomes_project 13 89919799 89929442 + Edil3 protein_coding processed_transcript MGP_129S1SvImJ_T0037739.1 MGP_129S1SvImJ_G0020798.1 mouse_genomes_project 13 89919853 90158499 + Edil3 protein_coding retained_intron MGP_129S1SvImJ_T0037740.1 MGP_129S1SvImJ_G0020798.1 mouse_genomes_project 13 89919857 90212387 + Edil3 protein_coding retained_intron MGP_129S1SvImJ_T0037741.1 MGP_129S1SvImJ_G0020798.1 mouse_genomes_project 13 89919881 90464646 + MGP_129S1SvImJ_P0037741 Edil3 protein_coding protein_coding MGP_129S1SvImJ_T0036440.1 MGP_129S1SvImJ_G0020288.1 mouse_genomes_project 13 18927143 18928097 - MGP_129S1SvImJ_P0036440 Olfr1361 protein_coding protein_coding MGP_129S1SvImJ_T0036939.1 MGP_129S1SvImJ_G0020526.1 mouse_genomes_project 13 47582971 47586481 + MGP_129S1SvImJ_P0036939 Barx1 protein_coding protein_coding MGP_129S1SvImJ_T0099370.1 MGP_129S1SvImJ_G0037437.1 mouse_genomes_project 13 64321010 64321098 - Gm25654 snRNA snRNA MGP_129S1SvImJ_T0036319.1 MGP_129S1SvImJ_G0020236.1 mouse_genomes_project 13 10538157 10727202 + MGP_129S1SvImJ_P0036319 Lyst protein_coding protein_coding MGP_129S1SvImJ_T0036320.1 MGP_129S1SvImJ_G0020236.1 mouse_genomes_project 13 10565751 10728569 + MGP_129S1SvImJ_P0036320 Lyst protein_coding unknown_likely_coding MGP_129S1SvImJ_T0036776.1 MGP_129S1SvImJ_G0020466.1 mouse_genomes_project 13 36072701 36202601 + MGP_129S1SvImJ_P0036776 Rreb1 protein_coding protein_coding MGP_129S1SvImJ_T0036777.1 MGP_129S1SvImJ_G0020466.1 mouse_genomes_project 13 36131717 36202578 + MGP_129S1SvImJ_P0036777 Rreb1 protein_coding protein_coding MGP_129S1SvImJ_T0036778.1 MGP_129S1SvImJ_G0020466.1 mouse_genomes_project 13 36131781 36244244 + MGP_129S1SvImJ_P0036778 Rreb1 protein_coding protein_coding MGP_129S1SvImJ_T0036779.1 MGP_129S1SvImJ_G0020466.1 mouse_genomes_project 13 36132057 36260716 + MGP_129S1SvImJ_P0036779 Rreb1 protein_coding protein_coding MGP_129S1SvImJ_T0036780.1 MGP_129S1SvImJ_G0020466.1 mouse_genomes_project 13 36132674 36241398 + MGP_129S1SvImJ_P0036780 Rreb1 protein_coding protein_coding MGP_129S1SvImJ_T0036781.1 MGP_129S1SvImJ_G0020466.1 mouse_genomes_project 13 36132674 36255740 + MGP_129S1SvImJ_P0036781 Rreb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036782.1 MGP_129S1SvImJ_G0020466.1 mouse_genomes_project 13 36133135 36241400 + MGP_129S1SvImJ_P0036782 Rreb1 protein_coding protein_coding MGP_129S1SvImJ_T0036783.1 MGP_129S1SvImJ_G0020466.1 mouse_genomes_project 13 36166742 36202666 + MGP_129S1SvImJ_P0036783 Rreb1 protein_coding protein_coding MGP_129S1SvImJ_T0036784.1 MGP_129S1SvImJ_G0020466.1 mouse_genomes_project 13 36197185 36260718 + MGP_129S1SvImJ_P0036784 Rreb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036785.1 MGP_129S1SvImJ_G0020466.1 mouse_genomes_project 13 36197622 36260710 + MGP_129S1SvImJ_P0036785 Rreb1 protein_coding protein_coding MGP_129S1SvImJ_T0036786.1 MGP_129S1SvImJ_G0020466.1 mouse_genomes_project 13 36255731 36257922 + MGP_129S1SvImJ_P0036786 Rreb1 protein_coding protein_coding MGP_129S1SvImJ_T0036833.1 MGP_129S1SvImJ_G0020490.1 mouse_genomes_project 13 40107753 40143541 + MGP_129S1SvImJ_P0036833 Tmem170b protein_coding protein_coding MGP_129S1SvImJ_T0036500.1 MGP_129S1SvImJ_G0020336.1 mouse_genomes_project 13 20527828 20528725 + MGP_129S1SvImJ_P0036500 Vmn1r218 protein_coding protein_coding MGP_129S1SvImJ_T0017391.1 MGP_129S1SvImJ_G0015257.1 mouse_genomes_project 13 59483733 59485702 + Etohd2 processed_transcript processed_transcript MGP_129S1SvImJ_T0017392.1 MGP_129S1SvImJ_G0015257.1 mouse_genomes_project 13 59483734 59487443 + Etohd2 processed_transcript processed_transcript MGP_129S1SvImJ_T0036908.1 MGP_129S1SvImJ_G0020517.1 mouse_genomes_project 13 45818522 45820805 - MGP_129S1SvImJ_P0036908 Nhlrc1 protein_coding protein_coding MGP_129S1SvImJ_T0012927.1 MGP_129S1SvImJ_G0011016.1 mouse_genomes_project 13 33081588 33082574 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099379.1 MGP_129S1SvImJ_G0037446.1 mouse_genomes_project 13 114833042 114833195 + Gm22768 snRNA snRNA MGP_129S1SvImJ_T0012887.1 MGP_129S1SvImJ_G0010976.1 mouse_genomes_project 13 19176869 19177866 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100649.1 MGP_129S1SvImJ_G0038716.1 mouse_genomes_project 13 79796716 79796860 + Gm25383 snoRNA snoRNA MGP_129S1SvImJ_T0036352.1 MGP_129S1SvImJ_G0020246.1 mouse_genomes_project 13 11618505 11626473 + MGP_129S1SvImJ_P0036352 AW209491 protein_coding protein_coding MGP_129S1SvImJ_T0036353.1 MGP_129S1SvImJ_G0020246.1 mouse_genomes_project 13 11618518 11626473 + MGP_129S1SvImJ_P0036353 AW209491 protein_coding protein_coding MGP_129S1SvImJ_T0000900.1 MGP_129S1SvImJ_G0000833.1 mouse_genomes_project 13 36472964 36475852 - TEC TEC MGP_129S1SvImJ_T0000901.1 MGP_129S1SvImJ_G0000833.1 mouse_genomes_project 13 36475492 36475852 - TEC TEC MGP_129S1SvImJ_T0017394.1 MGP_129S1SvImJ_G0015259.1 mouse_genomes_project 13 81615812 81617120 - 1700023H06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0037615.1 MGP_129S1SvImJ_G0020771.1 mouse_genomes_project 13 76242505 76314485 + MGP_129S1SvImJ_P0037615 Ell2 protein_coding protein_coding MGP_129S1SvImJ_T0000912.1 MGP_129S1SvImJ_G0000844.1 mouse_genomes_project 13 84596557 84600384 - TEC TEC MGP_129S1SvImJ_T0006590.1 MGP_129S1SvImJ_G0005465.1 mouse_genomes_project 13 52740078 52750840 - Gm43262 lincRNA lincRNA MGP_129S1SvImJ_T0037347.1 MGP_129S1SvImJ_G0020644.1 mouse_genomes_project 13 59472867 59483545 - protein_coding retained_intron MGP_129S1SvImJ_T0037847.1 MGP_129S1SvImJ_G0020832.1 mouse_genomes_project 13 95762437 95765428 - MGP_129S1SvImJ_P0037847 Gm9776 protein_coding protein_coding MGP_129S1SvImJ_T0036490.1 MGP_129S1SvImJ_G0020326.1 mouse_genomes_project 13 20099132 20101209 - MGP_129S1SvImJ_P0036490 Vmn1r206 protein_coding protein_coding MGP_129S1SvImJ_T0011375.1 MGP_129S1SvImJ_G0009491.1 mouse_genomes_project 13 56275786 56276035 + Gm27698 misc_RNA misc_RNA MGP_129S1SvImJ_T0012893.1 MGP_129S1SvImJ_G0010982.1 mouse_genomes_project 13 19611680 19615971 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099380.1 MGP_129S1SvImJ_G0037447.1 mouse_genomes_project 13 117884224 117884331 + Gm25985 snRNA snRNA MGP_129S1SvImJ_T0037062.1 MGP_129S1SvImJ_G0020567.1 mouse_genomes_project 13 53758260 53774684 + MGP_129S1SvImJ_P0037062 Cplx2 protein_coding protein_coding MGP_129S1SvImJ_T0003452.1 MGP_129S1SvImJ_G0003167.1 mouse_genomes_project 13 12428140 12429450 - Gm26645 antisense antisense MGP_129S1SvImJ_T0012944.1 MGP_129S1SvImJ_G0011033.1 mouse_genomes_project 13 69033208 69033962 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0036830.1 MGP_129S1SvImJ_G0020488.1 mouse_genomes_project 13 39761126 39761301 - MGP_129S1SvImJ_P0036830 Gm17364 protein_coding protein_coding MGP_129S1SvImJ_T0036573.1 MGP_129S1SvImJ_G0020378.1 mouse_genomes_project 13 22061471 22224500 + MGP_129S1SvImJ_P0036573 Fam65b protein_coding protein_coding MGP_129S1SvImJ_T0036574.1 MGP_129S1SvImJ_G0020378.1 mouse_genomes_project 13 22098547 22189546 + Fam65b protein_coding retained_intron MGP_129S1SvImJ_T0036575.1 MGP_129S1SvImJ_G0020378.1 mouse_genomes_project 13 22098547 22193379 + MGP_129S1SvImJ_P0036575 Fam65b protein_coding protein_coding MGP_129S1SvImJ_T0036576.1 MGP_129S1SvImJ_G0020378.1 mouse_genomes_project 13 22098564 22193275 + MGP_129S1SvImJ_P0036576 Fam65b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0036577.1 MGP_129S1SvImJ_G0020378.1 mouse_genomes_project 13 22122585 22224500 + MGP_129S1SvImJ_P0036577 Fam65b protein_coding protein_coding MGP_129S1SvImJ_T0036578.1 MGP_129S1SvImJ_G0020378.1 mouse_genomes_project 13 22122587 22156657 + Fam65b protein_coding retained_intron MGP_129S1SvImJ_T0036579.1 MGP_129S1SvImJ_G0020378.1 mouse_genomes_project 13 22122621 22184884 + MGP_129S1SvImJ_P0036579 Fam65b protein_coding protein_coding MGP_129S1SvImJ_T0036580.1 MGP_129S1SvImJ_G0020378.1 mouse_genomes_project 13 22122633 22193379 + MGP_129S1SvImJ_P0036580 Fam65b protein_coding protein_coding MGP_129S1SvImJ_T0036581.1 MGP_129S1SvImJ_G0020378.1 mouse_genomes_project 13 22122650 22183109 + Fam65b protein_coding retained_intron MGP_129S1SvImJ_T0036582.1 MGP_129S1SvImJ_G0020378.1 mouse_genomes_project 13 22157590 22162591 + Fam65b protein_coding retained_intron MGP_129S1SvImJ_T0036583.1 MGP_129S1SvImJ_G0020378.1 mouse_genomes_project 13 22160043 22162587 + Fam65b protein_coding retained_intron MGP_129S1SvImJ_T0036584.1 MGP_129S1SvImJ_G0020378.1 mouse_genomes_project 13 22174894 22181443 + Fam65b protein_coding retained_intron MGP_129S1SvImJ_T0036585.1 MGP_129S1SvImJ_G0020378.1 mouse_genomes_project 13 22197440 22203057 + Fam65b protein_coding retained_intron MGP_129S1SvImJ_T0036304.1 MGP_129S1SvImJ_G0020228.1 mouse_genomes_project 13 8920507 8999377 - MGP_129S1SvImJ_P0036304 Mtr protein_coding protein_coding MGP_129S1SvImJ_T0102191.1 MGP_129S1SvImJ_G0040025.1 mouse_genomes_project 13 19719259 19720145 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0036449.1 MGP_129S1SvImJ_G0020296.1 mouse_genomes_project 13 19058050 19058793 - MGP_129S1SvImJ_P0036449 Hist1h1b protein_coding protein_coding MGP_129S1SvImJ_T0037088.1 MGP_129S1SvImJ_G0020573.1 mouse_genomes_project 13 53996490 53997442 + MGP_129S1SvImJ_P0037088 Higd2a protein_coding protein_coding MGP_129S1SvImJ_T0037367.1 MGP_129S1SvImJ_G0020660.1 mouse_genomes_project 13 61046199 61056483 - MGP_129S1SvImJ_P0037367 Cts8 protein_coding protein_coding MGP_129S1SvImJ_T0006607.1 MGP_129S1SvImJ_G0005479.1 mouse_genomes_project 13 70290193 70311451 - 1700084F23Rik lincRNA lincRNA MGP_129S1SvImJ_T0006608.1 MGP_129S1SvImJ_G0005479.1 mouse_genomes_project 13 70297490 70310935 - 1700084F23Rik lincRNA lincRNA MGP_129S1SvImJ_T0037875.1 MGP_129S1SvImJ_G0020840.1 mouse_genomes_project 13 96894667 96911086 - MGP_129S1SvImJ_P0037875 Crhbp protein_coding protein_coding MGP_129S1SvImJ_T0012920.1 MGP_129S1SvImJ_G0011009.1 mouse_genomes_project 13 28600272 28600532 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006616.1 MGP_129S1SvImJ_G0005485.1 mouse_genomes_project 13 82545451 82550428 - Gm17259 lincRNA lincRNA MGP_129S1SvImJ_T0100656.1 MGP_129S1SvImJ_G0038723.1 mouse_genomes_project 13 101500954 101501085 - Gm24471 snoRNA snoRNA MGP_129S1SvImJ_T0036456.1 MGP_129S1SvImJ_G0020301.1 mouse_genomes_project 13 19067213 19366760 + MGP_129S1SvImJ_P0036456 Hist1h2bp protein_coding protein_coding MGP_129S1SvImJ_T0102196.1 MGP_129S1SvImJ_G0040030.1 mouse_genomes_project 13 19826711 19827076 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0037674.1 MGP_129S1SvImJ_G0020787.1 mouse_genomes_project 13 82425203 82439153 + MGP_129S1SvImJ_P0037674 Lysmd3 protein_coding protein_coding MGP_129S1SvImJ_T0039731.1 MGP_129S1SvImJ_G0021418.1 mouse_genomes_project 14 53447755 53462372 - MGP_129S1SvImJ_P0039731 Gm5142 protein_coding protein_coding MGP_129S1SvImJ_T0038893.1 MGP_129S1SvImJ_G0021154.1 mouse_genomes_project 14 26274457 26298317 + MGP_129S1SvImJ_P0038893 Lrrc18 protein_coding protein_coding MGP_129S1SvImJ_T0038894.1 MGP_129S1SvImJ_G0021154.1 mouse_genomes_project 14 26274473 26292396 + MGP_129S1SvImJ_P0038894 Lrrc18 protein_coding protein_coding MGP_129S1SvImJ_T0038895.1 MGP_129S1SvImJ_G0021154.1 mouse_genomes_project 14 26274478 26291678 + MGP_129S1SvImJ_P0038895 Lrrc18 protein_coding protein_coding MGP_129S1SvImJ_T0038896.1 MGP_129S1SvImJ_G0021154.1 mouse_genomes_project 14 26274521 26291839 + MGP_129S1SvImJ_P0038896 Lrrc18 protein_coding protein_coding MGP_129S1SvImJ_T0038897.1 MGP_129S1SvImJ_G0021154.1 mouse_genomes_project 14 26274533 26297185 + MGP_129S1SvImJ_P0038897 Lrrc18 protein_coding protein_coding MGP_129S1SvImJ_T0038898.1 MGP_129S1SvImJ_G0021154.1 mouse_genomes_project 14 26278335 26291459 + Lrrc18 protein_coding processed_transcript MGP_129S1SvImJ_T0039006.1 MGP_129S1SvImJ_G0021198.1 mouse_genomes_project 14 34783332 34790082 + MGP_129S1SvImJ_P0039006 Mbl1 protein_coding protein_coding MGP_129S1SvImJ_T0039282.1 MGP_129S1SvImJ_G0021289.1 mouse_genomes_project 14 46046818 46048725 - MGP_129S1SvImJ_P0039282 Olfr221 protein_coding protein_coding MGP_129S1SvImJ_T0039397.1 MGP_129S1SvImJ_G0021310.1 mouse_genomes_project 14 48415585 48424193 + MGP_129S1SvImJ_P0039397 Lrp10 protein_coding protein_coding MGP_129S1SvImJ_T0012982.1 MGP_129S1SvImJ_G0011071.1 mouse_genomes_project 14 3533011 3533835 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010031.1 MGP_129S1SvImJ_G0008147.1 mouse_genomes_project 14 100170393 100170498 - Gm22877 miRNA miRNA MGP_129S1SvImJ_T0002626.1 MGP_129S1SvImJ_G0002522.1 mouse_genomes_project 14 46713844 46714361 + MGP_129S1SvImJ_P0002626 Trav7-1 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0039467.1 MGP_129S1SvImJ_G0021331.1 mouse_genomes_project 14 48898275 48909666 - MGP_129S1SvImJ_P0039467 Efs protein_coding protein_coding MGP_129S1SvImJ_T0100708.1 MGP_129S1SvImJ_G0038775.1 mouse_genomes_project 14 96881599 96881723 - Gm24345 snoRNA snoRNA MGP_129S1SvImJ_T0100713.1 MGP_129S1SvImJ_G0038780.1 mouse_genomes_project 14 103096587 103096694 - Gm24634 snoRNA snoRNA MGP_129S1SvImJ_T0102238.1 MGP_129S1SvImJ_G0040072.1 mouse_genomes_project 14 37563976 37564418 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002639.1 MGP_129S1SvImJ_G0002531.1 mouse_genomes_project 14 46844058 46844643 + MGP_129S1SvImJ_P0002639 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0038797.1 MGP_129S1SvImJ_G0021126.1 mouse_genomes_project 14 24436423 24502349 - MGP_129S1SvImJ_P0038797 Dnah1 protein_coding protein_coding MGP_129S1SvImJ_T0010039.1 MGP_129S1SvImJ_G0008155.1 mouse_genomes_project 14 112498611 112498698 + Mir19b-1 miRNA miRNA MGP_129S1SvImJ_T0099430.1 MGP_129S1SvImJ_G0037497.1 mouse_genomes_project 14 112434473 112434579 - Gm24073 snRNA snRNA MGP_129S1SvImJ_T0098830.1 MGP_129S1SvImJ_G0036911.1 mouse_genomes_project 14 50832980 50834278 - C030013D06Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0040161.1 MGP_129S1SvImJ_G0021576.1 mouse_genomes_project 14 70773036 70896789 - MGP_129S1SvImJ_P0040161 Gtf2f2 protein_coding protein_coding MGP_129S1SvImJ_T0002679.1 MGP_129S1SvImJ_G0002565.1 mouse_genomes_project 14 47698261 47698868 + MGP_129S1SvImJ_P0002679 B230359F08Rik TR_V_gene TR_V_gene MGP_129S1SvImJ_T0038941.1 MGP_129S1SvImJ_G0021172.1 mouse_genomes_project 14 27707642 27711204 - MGP_129S1SvImJ_P0038941 Fam25c protein_coding protein_coding MGP_129S1SvImJ_T0039717.1 MGP_129S1SvImJ_G0021412.1 mouse_genomes_project 14 52024867 52045568 - MGP_129S1SvImJ_P0039717 Ska3 protein_coding protein_coding MGP_129S1SvImJ_T0038333.1 MGP_129S1SvImJ_G0021006.1 mouse_genomes_project 14 6637796 6646516 - MGP_129S1SvImJ_P0038333 Psmd6 protein_coding protein_coding MGP_129S1SvImJ_T0038334.1 MGP_129S1SvImJ_G0021006.1 mouse_genomes_project 14 6639524 6642164 - Psmd6 protein_coding retained_intron MGP_129S1SvImJ_T0038335.1 MGP_129S1SvImJ_G0021006.1 mouse_genomes_project 14 6641808 6642966 - Psmd6 protein_coding retained_intron MGP_129S1SvImJ_T0038336.1 MGP_129S1SvImJ_G0021006.1 mouse_genomes_project 14 6645242 6646465 - Psmd6 protein_coding retained_intron MGP_129S1SvImJ_T0002550.1 MGP_129S1SvImJ_G0002453.1 mouse_genomes_project 14 48108975 48109037 + MGP_129S1SvImJ_P0002550 Traj38 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0013019.1 MGP_129S1SvImJ_G0011108.1 mouse_genomes_project 14 46585309 46585877 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0040043.1 MGP_129S1SvImJ_G0021538.1 mouse_genomes_project 14 65109656 65120860 + MGP_129S1SvImJ_P0040043 Phyhip protein_coding protein_coding MGP_129S1SvImJ_T0040044.1 MGP_129S1SvImJ_G0021538.1 mouse_genomes_project 14 65110702 65115380 + MGP_129S1SvImJ_P0040044 Phyhip protein_coding protein_coding MGP_129S1SvImJ_T0006739.1 MGP_129S1SvImJ_G0005570.1 mouse_genomes_project 14 74984496 75122051 + Gm6999 lincRNA lincRNA MGP_129S1SvImJ_T0002688.1 MGP_129S1SvImJ_G0002571.1 mouse_genomes_project 14 47869372 47869960 + MGP_129S1SvImJ_P0002688 Trdv2-1 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002689.1 MGP_129S1SvImJ_G0002571.1 mouse_genomes_project 14 47869372 47869960 + MGP_129S1SvImJ_P0002689 Trdv2-1 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0102241.1 MGP_129S1SvImJ_G0040075.1 mouse_genomes_project 14 44327764 44328047 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0039542.1 MGP_129S1SvImJ_G0021351.1 mouse_genomes_project 14 49613265 49616489 + MGP_129S1SvImJ_P0039542 Psme1 protein_coding protein_coding MGP_129S1SvImJ_T0039543.1 MGP_129S1SvImJ_G0021351.1 mouse_genomes_project 14 49613502 49616671 + MGP_129S1SvImJ_P0039543 Psme1 protein_coding protein_coding MGP_129S1SvImJ_T0039544.1 MGP_129S1SvImJ_G0021351.1 mouse_genomes_project 14 49613547 49615785 + Psme1 protein_coding retained_intron MGP_129S1SvImJ_T0039545.1 MGP_129S1SvImJ_G0021351.1 mouse_genomes_project 14 49613598 49616671 + Psme1 protein_coding retained_intron MGP_129S1SvImJ_T0039546.1 MGP_129S1SvImJ_G0021351.1 mouse_genomes_project 14 49613610 49616517 + Psme1 protein_coding retained_intron MGP_129S1SvImJ_T0039547.1 MGP_129S1SvImJ_G0021351.1 mouse_genomes_project 14 49613628 49615546 + Psme1 protein_coding retained_intron MGP_129S1SvImJ_T0039548.1 MGP_129S1SvImJ_G0021351.1 mouse_genomes_project 14 49613680 49616085 + MGP_129S1SvImJ_P0039548 Psme1 protein_coding protein_coding MGP_129S1SvImJ_T0039549.1 MGP_129S1SvImJ_G0021351.1 mouse_genomes_project 14 49613717 49616524 + MGP_129S1SvImJ_P0039549 Psme1 protein_coding protein_coding MGP_129S1SvImJ_T0039550.1 MGP_129S1SvImJ_G0021351.1 mouse_genomes_project 14 49613717 49616524 + MGP_129S1SvImJ_P0039550 Psme1 protein_coding protein_coding MGP_129S1SvImJ_T0039551.1 MGP_129S1SvImJ_G0021351.1 mouse_genomes_project 14 49615106 49616594 + Psme1 protein_coding retained_intron MGP_129S1SvImJ_T0039552.1 MGP_129S1SvImJ_G0021351.1 mouse_genomes_project 14 49615176 49616090 + Psme1 protein_coding retained_intron MGP_129S1SvImJ_T0039553.1 MGP_129S1SvImJ_G0021351.1 mouse_genomes_project 14 49615890 49616672 + MGP_129S1SvImJ_P0039553 Psme1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038611.1 MGP_129S1SvImJ_G0021082.1 mouse_genomes_project 14 19554919 19608577 + MGP_129S1SvImJ_P0038611 Dennd6a protein_coding protein_coding MGP_129S1SvImJ_T0038612.1 MGP_129S1SvImJ_G0021082.1 mouse_genomes_project 14 19554936 19614665 + MGP_129S1SvImJ_P0038612 Dennd6a protein_coding protein_coding MGP_129S1SvImJ_T0039701.1 MGP_129S1SvImJ_G0021410.1 mouse_genomes_project 14 51846323 51959541 - MGP_129S1SvImJ_P0039701 Lats2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039704.1 MGP_129S1SvImJ_G0021410.1 mouse_genomes_project 14 51898275 51959561 - MGP_129S1SvImJ_P0039704 Lats2 protein_coding protein_coding MGP_129S1SvImJ_T0039705.1 MGP_129S1SvImJ_G0021410.1 mouse_genomes_project 14 51899711 51959559 - MGP_129S1SvImJ_P0039705 Lats2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039706.1 MGP_129S1SvImJ_G0021410.1 mouse_genomes_project 14 51903433 51959543 - MGP_129S1SvImJ_P0039706 Lats2 protein_coding protein_coding MGP_129S1SvImJ_T0039707.1 MGP_129S1SvImJ_G0021410.1 mouse_genomes_project 14 51907124 51911531 - MGP_129S1SvImJ_P0039707 Lats2 protein_coding protein_coding MGP_129S1SvImJ_T0039708.1 MGP_129S1SvImJ_G0021410.1 mouse_genomes_project 14 51916194 51973006 - MGP_129S1SvImJ_P0039708 Lats2 protein_coding protein_coding MGP_129S1SvImJ_T0039709.1 MGP_129S1SvImJ_G0021410.1 mouse_genomes_project 14 51935350 51947771 - MGP_129S1SvImJ_P0039709 Lats2 protein_coding protein_coding MGP_129S1SvImJ_T0039710.1 MGP_129S1SvImJ_G0021410.1 mouse_genomes_project 14 51935350 51947771 - MGP_129S1SvImJ_P0039710 Lats2 protein_coding protein_coding MGP_129S1SvImJ_T0039711.1 MGP_129S1SvImJ_G0021410.1 mouse_genomes_project 14 51947650 51958092 - MGP_129S1SvImJ_P0039711 Lats2 protein_coding protein_coding MGP_129S1SvImJ_T0039712.1 MGP_129S1SvImJ_G0021410.1 mouse_genomes_project 14 51947723 51960016 - Lats2 protein_coding processed_transcript MGP_129S1SvImJ_T0039917.1 MGP_129S1SvImJ_G0021494.1 mouse_genomes_project 14 60969862 60984254 + MGP_129S1SvImJ_P0039917 Trim35 protein_coding protein_coding MGP_129S1SvImJ_T0039918.1 MGP_129S1SvImJ_G0021494.1 mouse_genomes_project 14 60969921 60981127 + MGP_129S1SvImJ_P0039918 Trim35 protein_coding protein_coding MGP_129S1SvImJ_T0006717.1 MGP_129S1SvImJ_G0005554.1 mouse_genomes_project 14 52238313 52242686 + 3110083C13Rik lincRNA lincRNA MGP_129S1SvImJ_T0006733.1 MGP_129S1SvImJ_G0005565.1 mouse_genomes_project 14 64832269 64845911 + Gm26908 lincRNA lincRNA MGP_129S1SvImJ_T0040424.1 MGP_129S1SvImJ_G0021676.1 mouse_genomes_project 14 120836925 120905158 - MGP_129S1SvImJ_P0040424 Tmtc4 protein_coding protein_coding MGP_129S1SvImJ_T0040425.1 MGP_129S1SvImJ_G0021676.1 mouse_genomes_project 14 120836932 120905092 - MGP_129S1SvImJ_P0040425 Tmtc4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040426.1 MGP_129S1SvImJ_G0021676.1 mouse_genomes_project 14 120837699 120905017 - MGP_129S1SvImJ_P0040426 Tmtc4 protein_coding protein_coding MGP_129S1SvImJ_T0040427.1 MGP_129S1SvImJ_G0021676.1 mouse_genomes_project 14 120837728 120905017 - MGP_129S1SvImJ_P0040427 Tmtc4 protein_coding protein_coding MGP_129S1SvImJ_T0040428.1 MGP_129S1SvImJ_G0021676.1 mouse_genomes_project 14 120837874 120854930 - Tmtc4 protein_coding processed_transcript MGP_129S1SvImJ_T0040429.1 MGP_129S1SvImJ_G0021676.1 mouse_genomes_project 14 120843704 120848032 - Tmtc4 protein_coding retained_intron MGP_129S1SvImJ_T0040430.1 MGP_129S1SvImJ_G0021676.1 mouse_genomes_project 14 120851383 120905115 - Tmtc4 protein_coding retained_intron MGP_129S1SvImJ_T0040431.1 MGP_129S1SvImJ_G0021676.1 mouse_genomes_project 14 120863642 120905150 - MGP_129S1SvImJ_P0040431 Tmtc4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040432.1 MGP_129S1SvImJ_G0021676.1 mouse_genomes_project 14 120892604 120905044 - Tmtc4 protein_coding processed_transcript MGP_129S1SvImJ_T0098500.1 MGP_129S1SvImJ_G0036585.1 mouse_genomes_project 14 73363136 73363251 - Gm26197 rRNA rRNA MGP_129S1SvImJ_T0000955.1 MGP_129S1SvImJ_G0000887.1 mouse_genomes_project 14 114270921 114271836 + TEC TEC MGP_129S1SvImJ_T0038636.1 MGP_129S1SvImJ_G0021091.1 mouse_genomes_project 14 20246009 20418003 + MGP_129S1SvImJ_P0038636 Arhgef3 protein_coding protein_coding MGP_129S1SvImJ_T0038637.1 MGP_129S1SvImJ_G0021091.1 mouse_genomes_project 14 20346689 20418018 + MGP_129S1SvImJ_P0038637 Arhgef3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0039279.1 MGP_129S1SvImJ_G0021287.1 mouse_genomes_project 14 46016365 46032740 - MGP_129S1SvImJ_P0039279 Zfp219 protein_coding protein_coding MGP_129S1SvImJ_T0039280.1 MGP_129S1SvImJ_G0021287.1 mouse_genomes_project 14 46016374 46031720 - MGP_129S1SvImJ_P0039280 Zfp219 protein_coding protein_coding MGP_129S1SvImJ_T0002662.1 MGP_129S1SvImJ_G0002551.1 mouse_genomes_project 14 47289144 47289656 + MGP_129S1SvImJ_P0002662 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0009994.1 MGP_129S1SvImJ_G0008110.1 mouse_genomes_project 14 18769328 18769438 - Gm23701 miRNA miRNA MGP_129S1SvImJ_T0017460.1 MGP_129S1SvImJ_G0015286.1 mouse_genomes_project 14 119987104 119991851 - A330035P11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017461.1 MGP_129S1SvImJ_G0015286.1 mouse_genomes_project 14 119989274 119991872 - A330035P11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0039023.1 MGP_129S1SvImJ_G0021205.1 mouse_genomes_project 14 38834307 38838509 + Gpr137c protein_coding processed_transcript MGP_129S1SvImJ_T0039024.1 MGP_129S1SvImJ_G0021205.1 mouse_genomes_project 14 38834581 38898085 + MGP_129S1SvImJ_P0039024 Gpr137c protein_coding protein_coding MGP_129S1SvImJ_T0039025.1 MGP_129S1SvImJ_G0021205.1 mouse_genomes_project 14 38882406 38896108 + Gpr137c protein_coding retained_intron MGP_129S1SvImJ_T0039523.1 MGP_129S1SvImJ_G0021349.1 mouse_genomes_project 14 49593337 49603397 + MGP_129S1SvImJ_P0039523 Dcaf11 protein_coding protein_coding MGP_129S1SvImJ_T0039524.1 MGP_129S1SvImJ_G0021349.1 mouse_genomes_project 14 49593349 49594773 + MGP_129S1SvImJ_P0039524 Dcaf11 protein_coding protein_coding MGP_129S1SvImJ_T0039525.1 MGP_129S1SvImJ_G0021349.1 mouse_genomes_project 14 49593352 49594088 + Dcaf11 protein_coding processed_transcript MGP_129S1SvImJ_T0039526.1 MGP_129S1SvImJ_G0021349.1 mouse_genomes_project 14 49593356 49596265 + MGP_129S1SvImJ_P0039526 Dcaf11 protein_coding protein_coding MGP_129S1SvImJ_T0039527.1 MGP_129S1SvImJ_G0021349.1 mouse_genomes_project 14 49593393 49603396 + MGP_129S1SvImJ_P0039527 Dcaf11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039528.1 MGP_129S1SvImJ_G0021349.1 mouse_genomes_project 14 49593452 49602867 + Dcaf11 protein_coding retained_intron MGP_129S1SvImJ_T0039529.1 MGP_129S1SvImJ_G0021349.1 mouse_genomes_project 14 49593813 49594431 + Dcaf11 protein_coding processed_transcript MGP_129S1SvImJ_T0039530.1 MGP_129S1SvImJ_G0021349.1 mouse_genomes_project 14 49593843 49603263 + MGP_129S1SvImJ_P0039530 Dcaf11 protein_coding protein_coding MGP_129S1SvImJ_T0039531.1 MGP_129S1SvImJ_G0021349.1 mouse_genomes_project 14 49593849 49594775 + MGP_129S1SvImJ_P0039531 Dcaf11 protein_coding protein_coding MGP_129S1SvImJ_T0039532.1 MGP_129S1SvImJ_G0021349.1 mouse_genomes_project 14 49593864 49597735 + MGP_129S1SvImJ_P0039532 Dcaf11 protein_coding protein_coding MGP_129S1SvImJ_T0039533.1 MGP_129S1SvImJ_G0021349.1 mouse_genomes_project 14 49593865 49603393 + MGP_129S1SvImJ_P0039533 Dcaf11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039534.1 MGP_129S1SvImJ_G0021349.1 mouse_genomes_project 14 49594260 49603394 + MGP_129S1SvImJ_P0039534 Dcaf11 protein_coding protein_coding MGP_129S1SvImJ_T0039535.1 MGP_129S1SvImJ_G0021349.1 mouse_genomes_project 14 49594302 49597112 + MGP_129S1SvImJ_P0039535 Dcaf11 protein_coding protein_coding MGP_129S1SvImJ_T0039536.1 MGP_129S1SvImJ_G0021349.1 mouse_genomes_project 14 49594315 49603396 + Dcaf11 protein_coding retained_intron MGP_129S1SvImJ_T0039537.1 MGP_129S1SvImJ_G0021349.1 mouse_genomes_project 14 49594398 49603263 + MGP_129S1SvImJ_P0039537 Dcaf11 protein_coding protein_coding MGP_129S1SvImJ_T0039538.1 MGP_129S1SvImJ_G0021349.1 mouse_genomes_project 14 49594398 49603263 + MGP_129S1SvImJ_P0039538 Dcaf11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039539.1 MGP_129S1SvImJ_G0021349.1 mouse_genomes_project 14 49597722 49598175 + Dcaf11 protein_coding retained_intron MGP_129S1SvImJ_T0039540.1 MGP_129S1SvImJ_G0021349.1 mouse_genomes_project 14 49599193 49602721 + Dcaf11 protein_coding processed_transcript MGP_129S1SvImJ_T0039091.1 MGP_129S1SvImJ_G0021223.1 mouse_genomes_project 14 41304657 41333588 - MGP_129S1SvImJ_P0039091 Atg14 protein_coding protein_coding MGP_129S1SvImJ_T0038393.1 MGP_129S1SvImJ_G0021023.1 mouse_genomes_project 14 12096933 12103882 - MGP_129S1SvImJ_P0038393 Gm9637 protein_coding protein_coding MGP_129S1SvImJ_T0100684.1 MGP_129S1SvImJ_G0038751.1 mouse_genomes_project 14 56974529 56974659 + Gm24625 snoRNA snoRNA MGP_129S1SvImJ_T0102247.1 MGP_129S1SvImJ_G0040081.1 mouse_genomes_project 14 45863384 45863847 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0013011.1 MGP_129S1SvImJ_G0011100.1 mouse_genomes_project 14 39688615 39689970 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010033.1 MGP_129S1SvImJ_G0008149.1 mouse_genomes_project 14 102404444 102404533 + Gm22406 miRNA miRNA MGP_129S1SvImJ_T0039511.1 MGP_129S1SvImJ_G0021345.1 mouse_genomes_project 14 49539354 49546339 + MGP_129S1SvImJ_P0039511 Cpne6 protein_coding protein_coding MGP_129S1SvImJ_T0039512.1 MGP_129S1SvImJ_G0021345.1 mouse_genomes_project 14 49539357 49546339 + MGP_129S1SvImJ_P0039512 Cpne6 protein_coding protein_coding MGP_129S1SvImJ_T0039513.1 MGP_129S1SvImJ_G0021345.1 mouse_genomes_project 14 49539384 49546338 + Cpne6 protein_coding retained_intron MGP_129S1SvImJ_T0039514.1 MGP_129S1SvImJ_G0021345.1 mouse_genomes_project 14 49539506 49542602 + MGP_129S1SvImJ_P0039514 Cpne6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039515.1 MGP_129S1SvImJ_G0021345.1 mouse_genomes_project 14 49540220 49546339 + Cpne6 protein_coding retained_intron MGP_129S1SvImJ_T0039516.1 MGP_129S1SvImJ_G0021345.1 mouse_genomes_project 14 49540269 49546339 + MGP_129S1SvImJ_P0039516 Cpne6 protein_coding protein_coding MGP_129S1SvImJ_T0039517.1 MGP_129S1SvImJ_G0021345.1 mouse_genomes_project 14 49540894 49546337 + MGP_129S1SvImJ_P0039517 Cpne6 protein_coding protein_coding MGP_129S1SvImJ_T0038693.1 MGP_129S1SvImJ_G0021108.1 mouse_genomes_project 14 23962949 24021668 + MGP_129S1SvImJ_P0038693 Tmem110 protein_coding protein_coding MGP_129S1SvImJ_T0038694.1 MGP_129S1SvImJ_G0021108.1 mouse_genomes_project 14 23962953 24019252 + MGP_129S1SvImJ_P0038694 Tmem110 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038695.1 MGP_129S1SvImJ_G0021108.1 mouse_genomes_project 14 24011126 24019646 + Tmem110 protein_coding processed_transcript MGP_129S1SvImJ_T0038696.1 MGP_129S1SvImJ_G0021108.1 mouse_genomes_project 14 24015193 24017234 + Tmem110 protein_coding retained_intron MGP_129S1SvImJ_T0038697.1 MGP_129S1SvImJ_G0021108.1 mouse_genomes_project 14 24017036 24019682 + Tmem110 protein_coding retained_intron MGP_129S1SvImJ_T0039482.1 MGP_129S1SvImJ_G0021338.1 mouse_genomes_project 14 49054800 49098452 + MGP_129S1SvImJ_P0039482 Thtpa protein_coding protein_coding MGP_129S1SvImJ_T0039483.1 MGP_129S1SvImJ_G0021338.1 mouse_genomes_project 14 49055869 49098839 + Thtpa protein_coding processed_transcript MGP_129S1SvImJ_T0039484.1 MGP_129S1SvImJ_G0021338.1 mouse_genomes_project 14 49056405 49099913 + MGP_129S1SvImJ_P0039484 Thtpa protein_coding protein_coding MGP_129S1SvImJ_T0039489.1 MGP_129S1SvImJ_G0021338.1 mouse_genomes_project 14 49095710 49099913 + MGP_129S1SvImJ_P0039489 Thtpa protein_coding protein_coding MGP_129S1SvImJ_T0003575.1 MGP_129S1SvImJ_G0003248.1 mouse_genomes_project 14 48958925 48960550 + antisense antisense MGP_129S1SvImJ_T0039330.1 MGP_129S1SvImJ_G0021296.1 mouse_genomes_project 14 46332668 46344498 - MGP_129S1SvImJ_P0039330 Mettl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039331.1 MGP_129S1SvImJ_G0021296.1 mouse_genomes_project 14 46332841 46344543 - MGP_129S1SvImJ_P0039331 Mettl3 protein_coding protein_coding MGP_129S1SvImJ_T0039332.1 MGP_129S1SvImJ_G0021296.1 mouse_genomes_project 14 46332849 46338337 - MGP_129S1SvImJ_P0039332 Mettl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039333.1 MGP_129S1SvImJ_G0021296.1 mouse_genomes_project 14 46332857 46334662 - Mettl3 protein_coding retained_intron MGP_129S1SvImJ_T0039334.1 MGP_129S1SvImJ_G0021296.1 mouse_genomes_project 14 46332857 46334744 - MGP_129S1SvImJ_P0039334 Mettl3 protein_coding protein_coding MGP_129S1SvImJ_T0039335.1 MGP_129S1SvImJ_G0021296.1 mouse_genomes_project 14 46332857 46334745 - MGP_129S1SvImJ_P0039335 Mettl3 protein_coding protein_coding MGP_129S1SvImJ_T0039336.1 MGP_129S1SvImJ_G0021296.1 mouse_genomes_project 14 46333503 46344539 - MGP_129S1SvImJ_P0039336 Mettl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039337.1 MGP_129S1SvImJ_G0021296.1 mouse_genomes_project 14 46333703 46334755 - Mettl3 protein_coding retained_intron MGP_129S1SvImJ_T0039338.1 MGP_129S1SvImJ_G0021296.1 mouse_genomes_project 14 46334653 46336450 - Mettl3 protein_coding retained_intron MGP_129S1SvImJ_T0039339.1 MGP_129S1SvImJ_G0021296.1 mouse_genomes_project 14 46334983 46337765 - Mettl3 protein_coding retained_intron MGP_129S1SvImJ_T0039340.1 MGP_129S1SvImJ_G0021296.1 mouse_genomes_project 14 46335198 46344501 - MGP_129S1SvImJ_P0039340 Mettl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039341.1 MGP_129S1SvImJ_G0021296.1 mouse_genomes_project 14 46335463 46344402 - MGP_129S1SvImJ_P0039341 Mettl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039342.1 MGP_129S1SvImJ_G0021296.1 mouse_genomes_project 14 46336018 46344402 - MGP_129S1SvImJ_P0039342 Mettl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039343.1 MGP_129S1SvImJ_G0021296.1 mouse_genomes_project 14 46336028 46344522 - MGP_129S1SvImJ_P0039343 Mettl3 protein_coding protein_coding MGP_129S1SvImJ_T0039344.1 MGP_129S1SvImJ_G0021296.1 mouse_genomes_project 14 46338344 46344514 - MGP_129S1SvImJ_P0039344 Mettl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039345.1 MGP_129S1SvImJ_G0021296.1 mouse_genomes_project 14 46341618 46344539 - Mettl3 protein_coding retained_intron MGP_129S1SvImJ_T0100700.1 MGP_129S1SvImJ_G0038767.1 mouse_genomes_project 14 88222217 88222347 - Gm24127 snoRNA snoRNA MGP_129S1SvImJ_T0038450.1 MGP_129S1SvImJ_G0021048.1 mouse_genomes_project 14 13629295 13636011 + MGP_129S1SvImJ_P0038450 Plau protein_coding protein_coding MGP_129S1SvImJ_T0038981.1 MGP_129S1SvImJ_G0021187.1 mouse_genomes_project 14 30578759 30599176 - MGP_129S1SvImJ_P0038981 Cdhr1 protein_coding protein_coding MGP_129S1SvImJ_T0038445.1 MGP_129S1SvImJ_G0021043.1 mouse_genomes_project 14 13461161 13466749 + MGP_129S1SvImJ_P0038445 Fut11 protein_coding protein_coding MGP_129S1SvImJ_T0038925.1 MGP_129S1SvImJ_G0021163.1 mouse_genomes_project 14 27375246 27381110 + MGP_129S1SvImJ_P0038925 Gm5460 protein_coding protein_coding MGP_129S1SvImJ_T0002575.1 MGP_129S1SvImJ_G0002478.1 mouse_genomes_project 14 48135423 48135482 + MGP_129S1SvImJ_P0002575 Traj11 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0038332.1 MGP_129S1SvImJ_G0021005.1 mouse_genomes_project 14 6537828 6629004 + MGP_129S1SvImJ_P0038332 Atxn7 protein_coding protein_coding MGP_129S1SvImJ_T0039224.1 MGP_129S1SvImJ_G0021276.1 mouse_genomes_project 14 45135562 45136321 + MGP_129S1SvImJ_P0039224 Rnase2b protein_coding protein_coding MGP_129S1SvImJ_T0010000.1 MGP_129S1SvImJ_G0008116.1 mouse_genomes_project 14 38542258 38542327 - Mir327 miRNA miRNA MGP_129S1SvImJ_T0039747.1 MGP_129S1SvImJ_G0021424.1 mouse_genomes_project 14 53701201 53741960 - MGP_129S1SvImJ_P0039747 Setdb2 protein_coding protein_coding MGP_129S1SvImJ_T0039748.1 MGP_129S1SvImJ_G0021424.1 mouse_genomes_project 14 53701203 53741953 - MGP_129S1SvImJ_P0039748 Setdb2 protein_coding protein_coding MGP_129S1SvImJ_T0039749.1 MGP_129S1SvImJ_G0021424.1 mouse_genomes_project 14 53701456 53709641 - Setdb2 protein_coding retained_intron MGP_129S1SvImJ_T0039750.1 MGP_129S1SvImJ_G0021424.1 mouse_genomes_project 14 53722461 53741951 - MGP_129S1SvImJ_P0039750 Setdb2 protein_coding protein_coding MGP_129S1SvImJ_T0039751.1 MGP_129S1SvImJ_G0021424.1 mouse_genomes_project 14 53732221 53741949 - Setdb2 protein_coding processed_transcript MGP_129S1SvImJ_T0039211.1 MGP_129S1SvImJ_G0021266.1 mouse_genomes_project 14 44949609 44952617 + MGP_129S1SvImJ_P0039211 Rnase10 protein_coding protein_coding MGP_129S1SvImJ_T0039212.1 MGP_129S1SvImJ_G0021266.1 mouse_genomes_project 14 44949787 44952617 + MGP_129S1SvImJ_P0039212 Rnase10 protein_coding protein_coding MGP_129S1SvImJ_T0040348.1 MGP_129S1SvImJ_G0021646.1 mouse_genomes_project 14 115567052 115608002 - MGP_129S1SvImJ_P0040348 Dct protein_coding protein_coding MGP_129S1SvImJ_T0040405.1 MGP_129S1SvImJ_G0021673.1 mouse_genomes_project 14 120405567 120407103 + MGP_129S1SvImJ_P0040405 Gm10837 protein_coding protein_coding MGP_129S1SvImJ_T0012995.1 MGP_129S1SvImJ_G0011084.1 mouse_genomes_project 14 18738759 18739006 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006718.1 MGP_129S1SvImJ_G0005555.1 mouse_genomes_project 14 54821875 54928810 + Gm29266 lincRNA lincRNA MGP_129S1SvImJ_T0039883.1 MGP_129S1SvImJ_G0021483.1 mouse_genomes_project 14 60289311 60394745 + MGP_129S1SvImJ_P0039883 Scara5 protein_coding protein_coding MGP_129S1SvImJ_T0039884.1 MGP_129S1SvImJ_G0021483.1 mouse_genomes_project 14 60289345 60373003 + MGP_129S1SvImJ_P0039884 Scara5 protein_coding protein_coding MGP_129S1SvImJ_T0039885.1 MGP_129S1SvImJ_G0021483.1 mouse_genomes_project 14 60300837 60372851 + Scara5 protein_coding processed_transcript MGP_129S1SvImJ_T0100681.1 MGP_129S1SvImJ_G0038748.1 mouse_genomes_project 14 50967379 50967465 - Gm22498 snoRNA snoRNA MGP_129S1SvImJ_T0038642.1 MGP_129S1SvImJ_G0021095.1 mouse_genomes_project 14 21543600 21547624 + Wnt5a protein_coding processed_transcript MGP_129S1SvImJ_T0038643.1 MGP_129S1SvImJ_G0021095.1 mouse_genomes_project 14 21543809 21562202 + MGP_129S1SvImJ_P0038643 Wnt5a protein_coding protein_coding MGP_129S1SvImJ_T0038644.1 MGP_129S1SvImJ_G0021095.1 mouse_genomes_project 14 21549122 21550424 + Wnt5a protein_coding processed_transcript MGP_129S1SvImJ_T0038645.1 MGP_129S1SvImJ_G0021095.1 mouse_genomes_project 14 21549888 21562779 + Wnt5a protein_coding processed_transcript MGP_129S1SvImJ_T0038646.1 MGP_129S1SvImJ_G0021095.1 mouse_genomes_project 14 21549949 21550406 + Wnt5a protein_coding processed_transcript MGP_129S1SvImJ_T0002546.1 MGP_129S1SvImJ_G0002449.1 mouse_genomes_project 14 48104178 48104242 + MGP_129S1SvImJ_P0002546 Traj42 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0038910.1 MGP_129S1SvImJ_G0021156.1 mouse_genomes_project 14 26678870 26758649 - MGP_129S1SvImJ_P0038910 Mapk8 protein_coding protein_coding MGP_129S1SvImJ_T0038911.1 MGP_129S1SvImJ_G0021156.1 mouse_genomes_project 14 26682027 26758636 - MGP_129S1SvImJ_P0038911 Mapk8 protein_coding protein_coding MGP_129S1SvImJ_T0038912.1 MGP_129S1SvImJ_G0021156.1 mouse_genomes_project 14 26683074 26758633 - MGP_129S1SvImJ_P0038912 Mapk8 protein_coding protein_coding MGP_129S1SvImJ_T0038913.1 MGP_129S1SvImJ_G0021156.1 mouse_genomes_project 14 26683139 26719124 - MGP_129S1SvImJ_P0038913 Mapk8 protein_coding protein_coding MGP_129S1SvImJ_T0038914.1 MGP_129S1SvImJ_G0021156.1 mouse_genomes_project 14 26683274 26692478 - Mapk8 protein_coding processed_transcript MGP_129S1SvImJ_T0038915.1 MGP_129S1SvImJ_G0021156.1 mouse_genomes_project 14 26683277 26719107 - MGP_129S1SvImJ_P0038915 Mapk8 protein_coding protein_coding MGP_129S1SvImJ_T0038916.1 MGP_129S1SvImJ_G0021156.1 mouse_genomes_project 14 26686055 26691398 - Mapk8 protein_coding retained_intron MGP_129S1SvImJ_T0038917.1 MGP_129S1SvImJ_G0021156.1 mouse_genomes_project 14 26693107 26758649 - Mapk8 protein_coding retained_intron MGP_129S1SvImJ_T0038918.1 MGP_129S1SvImJ_G0021156.1 mouse_genomes_project 14 26711119 26758648 - Mapk8 protein_coding retained_intron MGP_129S1SvImJ_T0002535.1 MGP_129S1SvImJ_G0002440.1 mouse_genomes_project 14 48093716 48093782 + MGP_129S1SvImJ_P0002535 Traj52 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0039183.1 MGP_129S1SvImJ_G0021257.1 mouse_genomes_project 14 44734540 44741769 - MGP_129S1SvImJ_P0039183 Ccnb1ip1 protein_coding protein_coding MGP_129S1SvImJ_T0039522.1 MGP_129S1SvImJ_G0021348.1 mouse_genomes_project 14 49593273 49593738 - MGP_129S1SvImJ_P0039522 A730061H03Rik protein_coding protein_coding MGP_129S1SvImJ_T0039415.1 MGP_129S1SvImJ_G0021319.1 mouse_genomes_project 14 48598506 48598957 + MGP_129S1SvImJ_P0039415 Gm20726 protein_coding protein_coding MGP_129S1SvImJ_T0102240.1 MGP_129S1SvImJ_G0040074.1 mouse_genomes_project 14 37590405 37590865 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002569.1 MGP_129S1SvImJ_G0002472.1 mouse_genomes_project 14 48129049 48129115 + MGP_129S1SvImJ_P0002569 Traj18 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0009995.1 MGP_129S1SvImJ_G0008111.1 mouse_genomes_project 14 19651686 19651748 - Mir7672 miRNA miRNA MGP_129S1SvImJ_T0000943.1 MGP_129S1SvImJ_G0000875.1 mouse_genomes_project 14 61649072 61650444 + TEC TEC MGP_129S1SvImJ_T0010025.1 MGP_129S1SvImJ_G0008141.1 mouse_genomes_project 14 73232139 73232245 - Mir1971 miRNA miRNA MGP_129S1SvImJ_T0039071.1 MGP_129S1SvImJ_G0021219.1 mouse_genomes_project 14 40970110 41011880 - MGP_129S1SvImJ_P0039071 Wdhd1 protein_coding protein_coding MGP_129S1SvImJ_T0039072.1 MGP_129S1SvImJ_G0021219.1 mouse_genomes_project 14 40970110 41011838 - MGP_129S1SvImJ_P0039072 Wdhd1 protein_coding protein_coding MGP_129S1SvImJ_T0039073.1 MGP_129S1SvImJ_G0021219.1 mouse_genomes_project 14 40970111 41011905 - MGP_129S1SvImJ_P0039073 Wdhd1 protein_coding protein_coding MGP_129S1SvImJ_T0039074.1 MGP_129S1SvImJ_G0021219.1 mouse_genomes_project 14 40989165 41011880 - MGP_129S1SvImJ_P0039074 Wdhd1 protein_coding protein_coding MGP_129S1SvImJ_T0039075.1 MGP_129S1SvImJ_G0021219.1 mouse_genomes_project 14 41007503 41011855 - Wdhd1 protein_coding retained_intron MGP_129S1SvImJ_T0039502.1 MGP_129S1SvImJ_G0021341.1 mouse_genomes_project 14 49107752 49117858 - MGP_129S1SvImJ_P0039502 Jph4 protein_coding protein_coding MGP_129S1SvImJ_T0039503.1 MGP_129S1SvImJ_G0021341.1 mouse_genomes_project 14 49108199 49116475 - MGP_129S1SvImJ_P0039503 Jph4 protein_coding protein_coding MGP_129S1SvImJ_T0039504.1 MGP_129S1SvImJ_G0021341.1 mouse_genomes_project 14 49110564 49111481 - Jph4 protein_coding retained_intron MGP_129S1SvImJ_T0039505.1 MGP_129S1SvImJ_G0021341.1 mouse_genomes_project 14 49112412 49117503 - Jph4 protein_coding retained_intron MGP_129S1SvImJ_T0002599.1 MGP_129S1SvImJ_G0002500.1 mouse_genomes_project 14 48082786 48082840 + TR_J_pseudogene TR_J_pseudogene MGP_129S1SvImJ_T0017410.1 MGP_129S1SvImJ_G0015268.1 mouse_genomes_project 14 38435787 38552708 + processed_transcript processed_transcript MGP_129S1SvImJ_T0017411.1 MGP_129S1SvImJ_G0015268.1 mouse_genomes_project 14 38436070 38575270 + processed_transcript processed_transcript MGP_129S1SvImJ_T0039172.1 MGP_129S1SvImJ_G0021246.1 mouse_genomes_project 14 44308698 44309637 + MGP_129S1SvImJ_P0039172 Olfr736 protein_coding protein_coding MGP_129S1SvImJ_T0039304.1 MGP_129S1SvImJ_G0021293.1 mouse_genomes_project 14 46230441 46271611 - MGP_129S1SvImJ_P0039304 Chd8 protein_coding protein_coding MGP_129S1SvImJ_T0039305.1 MGP_129S1SvImJ_G0021293.1 mouse_genomes_project 14 46230441 46290743 - MGP_129S1SvImJ_P0039305 Chd8 protein_coding protein_coding MGP_129S1SvImJ_T0039306.1 MGP_129S1SvImJ_G0021293.1 mouse_genomes_project 14 46230763 46271831 - MGP_129S1SvImJ_P0039306 Chd8 protein_coding protein_coding MGP_129S1SvImJ_T0039307.1 MGP_129S1SvImJ_G0021293.1 mouse_genomes_project 14 46230788 46238494 - Chd8 protein_coding retained_intron MGP_129S1SvImJ_T0039308.1 MGP_129S1SvImJ_G0021293.1 mouse_genomes_project 14 46232080 46237026 - Chd8 protein_coding retained_intron MGP_129S1SvImJ_T0039309.1 MGP_129S1SvImJ_G0021293.1 mouse_genomes_project 14 46236111 46240083 - Chd8 protein_coding retained_intron MGP_129S1SvImJ_T0039310.1 MGP_129S1SvImJ_G0021293.1 mouse_genomes_project 14 46238139 46240230 - Chd8 protein_coding retained_intron MGP_129S1SvImJ_T0039311.1 MGP_129S1SvImJ_G0021293.1 mouse_genomes_project 14 46240362 46245553 - Chd8 protein_coding retained_intron MGP_129S1SvImJ_T0039312.1 MGP_129S1SvImJ_G0021293.1 mouse_genomes_project 14 46244377 46245909 - MGP_129S1SvImJ_P0039312 Chd8 protein_coding protein_coding MGP_129S1SvImJ_T0039313.1 MGP_129S1SvImJ_G0021293.1 mouse_genomes_project 14 46245329 46246766 - Chd8 protein_coding retained_intron MGP_129S1SvImJ_T0039314.1 MGP_129S1SvImJ_G0021293.1 mouse_genomes_project 14 46247488 46248458 - Chd8 protein_coding retained_intron MGP_129S1SvImJ_T0039315.1 MGP_129S1SvImJ_G0021293.1 mouse_genomes_project 14 46255115 46260096 - Chd8 protein_coding processed_transcript MGP_129S1SvImJ_T0039316.1 MGP_129S1SvImJ_G0021293.1 mouse_genomes_project 14 46287454 46290743 - Chd8 protein_coding retained_intron MGP_129S1SvImJ_T0017446.1 MGP_129S1SvImJ_G0015279.1 mouse_genomes_project 14 96565284 96599589 + 4930517O19Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017447.1 MGP_129S1SvImJ_G0015279.1 mouse_genomes_project 14 96565331 96599099 + 4930517O19Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017448.1 MGP_129S1SvImJ_G0015279.1 mouse_genomes_project 14 96565331 96600524 + 4930517O19Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0039007.1 MGP_129S1SvImJ_G0021199.1 mouse_genomes_project 14 34804023 34817007 - MGP_129S1SvImJ_P0039007 Sftpd protein_coding protein_coding MGP_129S1SvImJ_T0099400.1 MGP_129S1SvImJ_G0037467.1 mouse_genomes_project 14 44870458 44870562 + Gm24689 snRNA snRNA MGP_129S1SvImJ_T0040214.1 MGP_129S1SvImJ_G0021598.1 mouse_genomes_project 14 74581784 74584151 + MGP_129S1SvImJ_P0040214 protein_coding protein_coding MGP_129S1SvImJ_T0039082.1 MGP_129S1SvImJ_G0021222.1 mouse_genomes_project 14 41135240 41170623 - MGP_129S1SvImJ_P0039082 Dlgap5 protein_coding protein_coding MGP_129S1SvImJ_T0039083.1 MGP_129S1SvImJ_G0021222.1 mouse_genomes_project 14 41135249 41143964 - MGP_129S1SvImJ_P0039083 Dlgap5 protein_coding protein_coding MGP_129S1SvImJ_T0039084.1 MGP_129S1SvImJ_G0021222.1 mouse_genomes_project 14 41138412 41170393 - Dlgap5 protein_coding retained_intron MGP_129S1SvImJ_T0039085.1 MGP_129S1SvImJ_G0021222.1 mouse_genomes_project 14 41138821 41170393 - MGP_129S1SvImJ_P0039085 Dlgap5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0039086.1 MGP_129S1SvImJ_G0021222.1 mouse_genomes_project 14 41139532 41170423 - Dlgap5 protein_coding retained_intron MGP_129S1SvImJ_T0039087.1 MGP_129S1SvImJ_G0021222.1 mouse_genomes_project 14 41143559 41145676 - Dlgap5 protein_coding retained_intron MGP_129S1SvImJ_T0039088.1 MGP_129S1SvImJ_G0021222.1 mouse_genomes_project 14 41150128 41163976 - MGP_129S1SvImJ_P0039088 Dlgap5 protein_coding protein_coding MGP_129S1SvImJ_T0039089.1 MGP_129S1SvImJ_G0021222.1 mouse_genomes_project 14 41165812 41170416 - Dlgap5 protein_coding retained_intron MGP_129S1SvImJ_T0039090.1 MGP_129S1SvImJ_G0021222.1 mouse_genomes_project 14 41166344 41168729 - Dlgap5 protein_coding processed_transcript MGP_129S1SvImJ_T0040027.1 MGP_129S1SvImJ_G0021535.1 mouse_genomes_project 14 64948410 64998662 - MGP_129S1SvImJ_P0040027 Slc39a14 protein_coding protein_coding MGP_129S1SvImJ_T0040028.1 MGP_129S1SvImJ_G0021535.1 mouse_genomes_project 14 64951110 64995671 - MGP_129S1SvImJ_P0040028 Slc39a14 protein_coding protein_coding MGP_129S1SvImJ_T0040029.1 MGP_129S1SvImJ_G0021535.1 mouse_genomes_project 14 64951124 64998662 - MGP_129S1SvImJ_P0040029 Slc39a14 protein_coding protein_coding MGP_129S1SvImJ_T0040030.1 MGP_129S1SvImJ_G0021535.1 mouse_genomes_project 14 64953628 64956062 - Slc39a14 protein_coding retained_intron MGP_129S1SvImJ_T0040031.1 MGP_129S1SvImJ_G0021535.1 mouse_genomes_project 14 64955758 64958747 - Slc39a14 protein_coding retained_intron MGP_129S1SvImJ_T0040032.1 MGP_129S1SvImJ_G0021535.1 mouse_genomes_project 14 64958780 64998651 - Slc39a14 protein_coding retained_intron MGP_129S1SvImJ_T0040033.1 MGP_129S1SvImJ_G0021535.1 mouse_genomes_project 14 64959931 64995673 - Slc39a14 protein_coding retained_intron MGP_129S1SvImJ_T0040034.1 MGP_129S1SvImJ_G0021535.1 mouse_genomes_project 14 64960613 64979358 - MGP_129S1SvImJ_P0040034 Slc39a14 protein_coding protein_coding MGP_129S1SvImJ_T0040035.1 MGP_129S1SvImJ_G0021535.1 mouse_genomes_project 14 64961285 64998631 - MGP_129S1SvImJ_P0040035 Slc39a14 protein_coding protein_coding MGP_129S1SvImJ_T0040036.1 MGP_129S1SvImJ_G0021535.1 mouse_genomes_project 14 64961319 64968632 - MGP_129S1SvImJ_P0040036 Slc39a14 protein_coding protein_coding MGP_129S1SvImJ_T0040037.1 MGP_129S1SvImJ_G0021535.1 mouse_genomes_project 14 64961380 64998652 - MGP_129S1SvImJ_P0040037 Slc39a14 protein_coding protein_coding MGP_129S1SvImJ_T0040038.1 MGP_129S1SvImJ_G0021535.1 mouse_genomes_project 14 64963552 64976704 - MGP_129S1SvImJ_P0040038 Slc39a14 protein_coding protein_coding MGP_129S1SvImJ_T0040039.1 MGP_129S1SvImJ_G0021535.1 mouse_genomes_project 14 64976262 64998662 - Slc39a14 protein_coding retained_intron MGP_129S1SvImJ_T0040277.1 MGP_129S1SvImJ_G0021624.1 mouse_genomes_project 14 98165782 98166217 - MGP_129S1SvImJ_P0040277 Gm9922 protein_coding protein_coding MGP_129S1SvImJ_T0002571.1 MGP_129S1SvImJ_G0002474.1 mouse_genomes_project 14 48131418 48131479 + MGP_129S1SvImJ_P0002571 Traj16 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0039044.1 MGP_129S1SvImJ_G0021211.1 mouse_genomes_project 14 40045701 40049710 + Gm15217 protein_coding processed_transcript MGP_129S1SvImJ_T0039045.1 MGP_129S1SvImJ_G0021211.1 mouse_genomes_project 14 40045754 40049900 + MGP_129S1SvImJ_P0039045 Gm15217 protein_coding protein_coding MGP_129S1SvImJ_T0039046.1 MGP_129S1SvImJ_G0021211.1 mouse_genomes_project 14 40047412 40049660 + Gm15217 protein_coding processed_transcript MGP_129S1SvImJ_T0038360.1 MGP_129S1SvImJ_G0021016.1 mouse_genomes_project 14 9000400 9069478 + MGP_129S1SvImJ_P0038360 Top2b protein_coding protein_coding MGP_129S1SvImJ_T0038361.1 MGP_129S1SvImJ_G0021016.1 mouse_genomes_project 14 9025268 9029246 + Top2b protein_coding retained_intron MGP_129S1SvImJ_T0038362.1 MGP_129S1SvImJ_G0021016.1 mouse_genomes_project 14 9048650 9055726 + MGP_129S1SvImJ_P0038362 Top2b protein_coding protein_coding MGP_129S1SvImJ_T0038363.1 MGP_129S1SvImJ_G0021016.1 mouse_genomes_project 14 9050755 9055397 + MGP_129S1SvImJ_P0038363 Top2b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038364.1 MGP_129S1SvImJ_G0021016.1 mouse_genomes_project 14 9052391 9064134 + MGP_129S1SvImJ_P0038364 Top2b protein_coding protein_coding MGP_129S1SvImJ_T0038365.1 MGP_129S1SvImJ_G0021016.1 mouse_genomes_project 14 9061982 9067197 + Top2b protein_coding retained_intron MGP_129S1SvImJ_T0012987.1 MGP_129S1SvImJ_G0011076.1 mouse_genomes_project 14 11467380 11468551 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038546.1 MGP_129S1SvImJ_G0021065.1 mouse_genomes_project 14 18387200 18468560 + Zmiz1 protein_coding retained_intron MGP_129S1SvImJ_T0038547.1 MGP_129S1SvImJ_G0021065.1 mouse_genomes_project 14 18387239 18597766 + MGP_129S1SvImJ_P0038547 Zmiz1 protein_coding protein_coding MGP_129S1SvImJ_T0038548.1 MGP_129S1SvImJ_G0021065.1 mouse_genomes_project 14 18387282 18595742 + MGP_129S1SvImJ_P0038548 Zmiz1 protein_coding protein_coding MGP_129S1SvImJ_T0038549.1 MGP_129S1SvImJ_G0021065.1 mouse_genomes_project 14 18387307 18580071 + Zmiz1 protein_coding retained_intron MGP_129S1SvImJ_T0038550.1 MGP_129S1SvImJ_G0021065.1 mouse_genomes_project 14 18387570 18500894 + Zmiz1 protein_coding processed_transcript MGP_129S1SvImJ_T0038551.1 MGP_129S1SvImJ_G0021065.1 mouse_genomes_project 14 18537868 18574127 + Zmiz1 protein_coding processed_transcript MGP_129S1SvImJ_T0038552.1 MGP_129S1SvImJ_G0021065.1 mouse_genomes_project 14 18538349 18576230 + MGP_129S1SvImJ_P0038552 Zmiz1 protein_coding protein_coding MGP_129S1SvImJ_T0038553.1 MGP_129S1SvImJ_G0021065.1 mouse_genomes_project 14 18587853 18589429 + Zmiz1 protein_coding retained_intron MGP_129S1SvImJ_T0006672.1 MGP_129S1SvImJ_G0005523.1 mouse_genomes_project 14 17566169 17570279 + 4931403M11Rik lincRNA lincRNA MGP_129S1SvImJ_T0038663.1 MGP_129S1SvImJ_G0021103.1 mouse_genomes_project 14 23605738 23653215 + MGP_129S1SvImJ_P0038663 Dcp1a protein_coding protein_coding MGP_129S1SvImJ_T0098504.1 MGP_129S1SvImJ_G0036589.1 mouse_genomes_project 14 116444044 116444167 - n-R5s51 rRNA rRNA MGP_129S1SvImJ_T0039935.1 MGP_129S1SvImJ_G0021499.1 mouse_genomes_project 14 61572908 61575050 + MGP_129S1SvImJ_P0039935 Gm5464 protein_coding protein_coding MGP_129S1SvImJ_T0039628.1 MGP_129S1SvImJ_G0021368.1 mouse_genomes_project 14 49796501 49800915 - MGP_129S1SvImJ_P0039628 Cideb protein_coding protein_coding MGP_129S1SvImJ_T0039629.1 MGP_129S1SvImJ_G0021368.1 mouse_genomes_project 14 49797114 49800836 - Cideb protein_coding retained_intron MGP_129S1SvImJ_T0010011.1 MGP_129S1SvImJ_G0008127.1 mouse_genomes_project 14 56023771 56023864 - Mir16-1 miRNA miRNA MGP_129S1SvImJ_T0039218.1 MGP_129S1SvImJ_G0021272.1 mouse_genomes_project 14 45054547 45073564 + MGP_129S1SvImJ_P0039218 Rnase4 protein_coding protein_coding MGP_129S1SvImJ_T0039220.1 MGP_129S1SvImJ_G0021272.1 mouse_genomes_project 14 45061496 45073564 + MGP_129S1SvImJ_P0039220 Rnase4 protein_coding protein_coding MGP_129S1SvImJ_T0013062.1 MGP_129S1SvImJ_G0011151.1 mouse_genomes_project 14 110863584 110864026 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039909.1 MGP_129S1SvImJ_G0021493.1 mouse_genomes_project 14 60810928 60950653 - MGP_129S1SvImJ_P0039909 Ptk2b protein_coding protein_coding MGP_129S1SvImJ_T0039910.1 MGP_129S1SvImJ_G0021493.1 mouse_genomes_project 14 60810929 60876338 - MGP_129S1SvImJ_P0039910 Ptk2b protein_coding protein_coding MGP_129S1SvImJ_T0039911.1 MGP_129S1SvImJ_G0021493.1 mouse_genomes_project 14 60810933 60827943 - MGP_129S1SvImJ_P0039911 Ptk2b protein_coding protein_coding MGP_129S1SvImJ_T0039912.1 MGP_129S1SvImJ_G0021493.1 mouse_genomes_project 14 60810933 60950653 - MGP_129S1SvImJ_P0039912 Ptk2b protein_coding protein_coding MGP_129S1SvImJ_T0039913.1 MGP_129S1SvImJ_G0021493.1 mouse_genomes_project 14 60810938 60818352 - Ptk2b protein_coding retained_intron MGP_129S1SvImJ_T0039914.1 MGP_129S1SvImJ_G0021493.1 mouse_genomes_project 14 60811515 60950583 - MGP_129S1SvImJ_P0039914 Ptk2b protein_coding protein_coding MGP_129S1SvImJ_T0039915.1 MGP_129S1SvImJ_G0021493.1 mouse_genomes_project 14 60813952 60821576 - Ptk2b protein_coding retained_intron MGP_129S1SvImJ_T0039916.1 MGP_129S1SvImJ_G0021493.1 mouse_genomes_project 14 60830386 60950593 - Ptk2b protein_coding retained_intron MGP_129S1SvImJ_T0002603.1 MGP_129S1SvImJ_G0002504.1 mouse_genomes_project 14 48110802 48110867 + TR_J_pseudogene TR_J_pseudogene MGP_129S1SvImJ_T0011397.1 MGP_129S1SvImJ_G0009513.1 mouse_genomes_project 14 56046541 56046678 + Gm27972 misc_RNA misc_RNA MGP_129S1SvImJ_T0003589.1 MGP_129S1SvImJ_G0003258.1 mouse_genomes_project 14 58143413 58148252 - Gm15918 antisense antisense MGP_129S1SvImJ_T0039766.1 MGP_129S1SvImJ_G0021430.1 mouse_genomes_project 14 54567378 54606797 - MGP_129S1SvImJ_P0039766 Nupl1 protein_coding protein_coding MGP_129S1SvImJ_T0011389.1 MGP_129S1SvImJ_G0009505.1 mouse_genomes_project 14 25247173 25247270 + Gm26045 misc_RNA misc_RNA MGP_129S1SvImJ_T0003551.1 MGP_129S1SvImJ_G0003227.1 mouse_genomes_project 14 16454234 16458573 + Gm29626 antisense antisense MGP_129S1SvImJ_T0003552.1 MGP_129S1SvImJ_G0003227.1 mouse_genomes_project 14 16454251 16458571 + Gm29626 antisense antisense MGP_129S1SvImJ_T0038653.1 MGP_129S1SvImJ_G0021100.1 mouse_genomes_project 14 23100804 23113474 - MGP_129S1SvImJ_P0038653 Il17rb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038654.1 MGP_129S1SvImJ_G0021100.1 mouse_genomes_project 14 23100831 23113557 - MGP_129S1SvImJ_P0038654 Il17rb protein_coding protein_coding MGP_129S1SvImJ_T0038655.1 MGP_129S1SvImJ_G0021100.1 mouse_genomes_project 14 23100831 23113557 - MGP_129S1SvImJ_P0038655 Il17rb protein_coding protein_coding MGP_129S1SvImJ_T0038656.1 MGP_129S1SvImJ_G0021100.1 mouse_genomes_project 14 23100862 23113470 - MGP_129S1SvImJ_P0038656 Il17rb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0098319.1 MGP_129S1SvImJ_G0036404.1 mouse_genomes_project 14 103289168 103289358 - pseudogene pseudogene MGP_129S1SvImJ_T0039490.1 MGP_129S1SvImJ_G0021340.1 mouse_genomes_project 14 49099504 49107457 - MGP_129S1SvImJ_P0039490 Ap1g2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039491.1 MGP_129S1SvImJ_G0021340.1 mouse_genomes_project 14 49099776 49100315 - Ap1g2 protein_coding retained_intron MGP_129S1SvImJ_T0039492.1 MGP_129S1SvImJ_G0021340.1 mouse_genomes_project 14 49099776 49107190 - MGP_129S1SvImJ_P0039492 Ap1g2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039493.1 MGP_129S1SvImJ_G0021340.1 mouse_genomes_project 14 49099776 49107471 - MGP_129S1SvImJ_P0039493 Ap1g2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039494.1 MGP_129S1SvImJ_G0021340.1 mouse_genomes_project 14 49099776 49107516 - MGP_129S1SvImJ_P0039494 Ap1g2 protein_coding protein_coding MGP_129S1SvImJ_T0039495.1 MGP_129S1SvImJ_G0021340.1 mouse_genomes_project 14 49099781 49107070 - MGP_129S1SvImJ_P0039495 Ap1g2 protein_coding protein_coding MGP_129S1SvImJ_T0039496.1 MGP_129S1SvImJ_G0021340.1 mouse_genomes_project 14 49099980 49107055 - Ap1g2 protein_coding processed_transcript MGP_129S1SvImJ_T0039497.1 MGP_129S1SvImJ_G0021340.1 mouse_genomes_project 14 49101361 49101714 - Ap1g2 protein_coding retained_intron MGP_129S1SvImJ_T0039498.1 MGP_129S1SvImJ_G0021340.1 mouse_genomes_project 14 49103272 49105433 - Ap1g2 protein_coding retained_intron MGP_129S1SvImJ_T0039499.1 MGP_129S1SvImJ_G0021340.1 mouse_genomes_project 14 49103555 49105814 - Ap1g2 protein_coding retained_intron MGP_129S1SvImJ_T0039500.1 MGP_129S1SvImJ_G0021340.1 mouse_genomes_project 14 49106628 49107484 - Ap1g2 protein_coding retained_intron MGP_129S1SvImJ_T0039501.1 MGP_129S1SvImJ_G0021340.1 mouse_genomes_project 14 49106847 49107431 - Ap1g2 protein_coding processed_transcript MGP_129S1SvImJ_T0038544.1 MGP_129S1SvImJ_G0021064.1 mouse_genomes_project 14 17432542 17437285 + MGP_129S1SvImJ_P0038544 Rps24 protein_coding protein_coding MGP_129S1SvImJ_T0038545.1 MGP_129S1SvImJ_G0021064.1 mouse_genomes_project 14 17432542 17437999 + MGP_129S1SvImJ_P0038545 Rps24 protein_coding protein_coding MGP_129S1SvImJ_T0006719.1 MGP_129S1SvImJ_G0005556.1 mouse_genomes_project 14 56017096 56018509 - Gm27010 lincRNA lincRNA MGP_129S1SvImJ_T0039196.1 MGP_129S1SvImJ_G0021263.1 mouse_genomes_project 14 44878809 44880909 + MGP_129S1SvImJ_P0039196 Apex1 protein_coding protein_coding MGP_129S1SvImJ_T0039197.1 MGP_129S1SvImJ_G0021263.1 mouse_genomes_project 14 44878810 44880321 + MGP_129S1SvImJ_P0039197 Apex1 protein_coding protein_coding MGP_129S1SvImJ_T0039198.1 MGP_129S1SvImJ_G0021263.1 mouse_genomes_project 14 44878819 44879475 + MGP_129S1SvImJ_P0039198 Apex1 protein_coding protein_coding MGP_129S1SvImJ_T0039199.1 MGP_129S1SvImJ_G0021263.1 mouse_genomes_project 14 44879126 44880909 + MGP_129S1SvImJ_P0039199 Apex1 protein_coding protein_coding MGP_129S1SvImJ_T0039349.1 MGP_129S1SvImJ_G0021299.1 mouse_genomes_project 14 46450852 46455636 - MGP_129S1SvImJ_P0039349 Olfr1511 protein_coding protein_coding MGP_129S1SvImJ_T0002582.1 MGP_129S1SvImJ_G0002485.1 mouse_genomes_project 14 48146151 48146217 + MGP_129S1SvImJ_P0002582 Traj2 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0040205.1 MGP_129S1SvImJ_G0021594.1 mouse_genomes_project 14 74401932 74416469 - MGP_129S1SvImJ_P0040205 Rgcc protein_coding protein_coding MGP_129S1SvImJ_T0002566.1 MGP_129S1SvImJ_G0002469.1 mouse_genomes_project 14 48127102 48127159 + MGP_129S1SvImJ_P0002566 Traj21 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0038317.1 MGP_129S1SvImJ_G0020998.1 mouse_genomes_project 14 4693714 4712730 + MGP_129S1SvImJ_P0038317 3830406C13Rik protein_coding protein_coding MGP_129S1SvImJ_T0038318.1 MGP_129S1SvImJ_G0020998.1 mouse_genomes_project 14 4693714 4712730 + MGP_129S1SvImJ_P0038318 3830406C13Rik protein_coding protein_coding MGP_129S1SvImJ_T0040114.1 MGP_129S1SvImJ_G0021561.1 mouse_genomes_project 14 68319824 68324029 + Sucla2 protein_coding processed_transcript MGP_129S1SvImJ_T0040115.1 MGP_129S1SvImJ_G0021561.1 mouse_genomes_project 14 68320000 68364273 + MGP_129S1SvImJ_P0040115 Sucla2 protein_coding protein_coding MGP_129S1SvImJ_T0040116.1 MGP_129S1SvImJ_G0021561.1 mouse_genomes_project 14 68333556 68334146 + Sucla2 protein_coding retained_intron MGP_129S1SvImJ_T0040117.1 MGP_129S1SvImJ_G0021561.1 mouse_genomes_project 14 68358496 68358998 + Sucla2 protein_coding retained_intron MGP_129S1SvImJ_T0040118.1 MGP_129S1SvImJ_G0021561.1 mouse_genomes_project 14 68363527 68364264 + Sucla2 protein_coding processed_transcript MGP_129S1SvImJ_T0017414.1 MGP_129S1SvImJ_G0015270.1 mouse_genomes_project 14 55989975 56080260 - Dleu2 processed_transcript lincRNA MGP_129S1SvImJ_T0017415.1 MGP_129S1SvImJ_G0015270.1 mouse_genomes_project 14 55990170 56080201 - Dleu2 processed_transcript lincRNA MGP_129S1SvImJ_T0017416.1 MGP_129S1SvImJ_G0015270.1 mouse_genomes_project 14 55990608 56080189 - Dleu2 processed_transcript lincRNA MGP_129S1SvImJ_T0017417.1 MGP_129S1SvImJ_G0015270.1 mouse_genomes_project 14 55990725 56046726 - Dleu2 processed_transcript lincRNA MGP_129S1SvImJ_T0017418.1 MGP_129S1SvImJ_G0015270.1 mouse_genomes_project 14 55990860 56046691 - Dleu2 processed_transcript lincRNA MGP_129S1SvImJ_T0017419.1 MGP_129S1SvImJ_G0015270.1 mouse_genomes_project 14 56009386 56010923 - Dleu2 processed_transcript TEC MGP_129S1SvImJ_T0017420.1 MGP_129S1SvImJ_G0015270.1 mouse_genomes_project 14 56010644 56080212 - Dleu2 processed_transcript lincRNA MGP_129S1SvImJ_T0017421.1 MGP_129S1SvImJ_G0015270.1 mouse_genomes_project 14 56016353 56046666 - Dleu2 processed_transcript lincRNA MGP_129S1SvImJ_T0017422.1 MGP_129S1SvImJ_G0015270.1 mouse_genomes_project 14 56018966 56023784 - Dleu2 processed_transcript TEC MGP_129S1SvImJ_T0017423.1 MGP_129S1SvImJ_G0015270.1 mouse_genomes_project 14 56019762 56080212 - Dleu2 processed_transcript lincRNA MGP_129S1SvImJ_T0017424.1 MGP_129S1SvImJ_G0015270.1 mouse_genomes_project 14 56024190 56046526 - Dleu2 processed_transcript lincRNA MGP_129S1SvImJ_T0017425.1 MGP_129S1SvImJ_G0015270.1 mouse_genomes_project 14 56024240 56046726 - Dleu2 processed_transcript lincRNA MGP_129S1SvImJ_T0017426.1 MGP_129S1SvImJ_G0015270.1 mouse_genomes_project 14 56027103 56080201 - Dleu2 processed_transcript lincRNA MGP_129S1SvImJ_T0017427.1 MGP_129S1SvImJ_G0015270.1 mouse_genomes_project 14 56039547 56080200 - Dleu2 processed_transcript lincRNA MGP_129S1SvImJ_T0017428.1 MGP_129S1SvImJ_G0015270.1 mouse_genomes_project 14 56039621 56080212 - Dleu2 processed_transcript lincRNA MGP_129S1SvImJ_T0039411.1 MGP_129S1SvImJ_G0021315.1 mouse_genomes_project 14 48545105 48569055 - MGP_129S1SvImJ_P0039411 4931414P19Rik protein_coding protein_coding MGP_129S1SvImJ_T0038980.1 MGP_129S1SvImJ_G0021186.1 mouse_genomes_project 14 30569017 30574639 + MGP_129S1SvImJ_P0038980 Lrit2 protein_coding protein_coding MGP_129S1SvImJ_T0010012.1 MGP_129S1SvImJ_G0008128.1 mouse_genomes_project 14 56023918 56024002 - Mir15a miRNA miRNA MGP_129S1SvImJ_T0000945.1 MGP_129S1SvImJ_G0000877.1 mouse_genomes_project 14 64051345 64055902 - TEC TEC MGP_129S1SvImJ_T0039216.1 MGP_129S1SvImJ_G0021270.1 mouse_genomes_project 14 45019903 45021035 - MGP_129S1SvImJ_P0039216 Olfr750 protein_coding protein_coding MGP_129S1SvImJ_T0013067.1 MGP_129S1SvImJ_G0011156.1 mouse_genomes_project 14 121904191 121904732 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010022.1 MGP_129S1SvImJ_G0008138.1 mouse_genomes_project 14 65095711 65095793 + Mir320 miRNA miRNA MGP_129S1SvImJ_T0039653.1 MGP_129S1SvImJ_G0021385.1 mouse_genomes_project 14 50188963 50191970 - MGP_129S1SvImJ_P0039653 Gzme protein_coding protein_coding MGP_129S1SvImJ_T0038807.1 MGP_129S1SvImJ_G0021131.1 mouse_genomes_project 14 24713418 24770153 - MGP_129S1SvImJ_P0038807 Colq protein_coding protein_coding MGP_129S1SvImJ_T0038808.1 MGP_129S1SvImJ_G0021131.1 mouse_genomes_project 14 24713496 24749938 - MGP_129S1SvImJ_P0038808 Colq protein_coding protein_coding MGP_129S1SvImJ_T0038810.1 MGP_129S1SvImJ_G0021131.1 mouse_genomes_project 14 24743224 24783351 - MGP_129S1SvImJ_P0038810 Colq protein_coding protein_coding MGP_129S1SvImJ_T0038811.1 MGP_129S1SvImJ_G0021131.1 mouse_genomes_project 14 24771155 24783327 - Colq protein_coding processed_transcript MGP_129S1SvImJ_T0038812.1 MGP_129S1SvImJ_G0021131.1 mouse_genomes_project 14 24778770 24783316 - Colq protein_coding processed_transcript MGP_129S1SvImJ_T0039359.1 MGP_129S1SvImJ_G0021302.1 mouse_genomes_project 14 46568922 46574645 - MGP_129S1SvImJ_P0039359 Olfr1507 protein_coding protein_coding MGP_129S1SvImJ_T0039360.1 MGP_129S1SvImJ_G0021302.1 mouse_genomes_project 14 46568922 46570034 - MGP_129S1SvImJ_P0039360 Olfr1507 protein_coding protein_coding MGP_129S1SvImJ_T0039361.1 MGP_129S1SvImJ_G0021302.1 mouse_genomes_project 14 46569465 46574247 - MGP_129S1SvImJ_P0039361 Olfr1507 protein_coding protein_coding MGP_129S1SvImJ_T0039362.1 MGP_129S1SvImJ_G0021302.1 mouse_genomes_project 14 46569477 46574641 - MGP_129S1SvImJ_P0039362 Olfr1507 protein_coding protein_coding MGP_129S1SvImJ_T0039363.1 MGP_129S1SvImJ_G0021302.1 mouse_genomes_project 14 46569486 46574275 - MGP_129S1SvImJ_P0039363 Olfr1507 protein_coding protein_coding MGP_129S1SvImJ_T0039364.1 MGP_129S1SvImJ_G0021302.1 mouse_genomes_project 14 46569882 46574639 - MGP_129S1SvImJ_P0039364 Olfr1507 protein_coding protein_coding MGP_129S1SvImJ_T0098496.1 MGP_129S1SvImJ_G0036581.1 mouse_genomes_project 14 61274056 61274146 - Gm23899 rRNA rRNA MGP_129S1SvImJ_T0002623.1 MGP_129S1SvImJ_G0002519.1 mouse_genomes_project 14 46649678 46650227 + MGP_129S1SvImJ_P0002623 Trav3-1 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0100673.1 MGP_129S1SvImJ_G0038740.1 mouse_genomes_project 14 30050191 30050316 + Gm24394 snoRNA snoRNA MGP_129S1SvImJ_T0039658.1 MGP_129S1SvImJ_G0021390.1 mouse_genomes_project 14 50301979 50306070 - MGP_129S1SvImJ_P0039658 Gzmc protein_coding protein_coding MGP_129S1SvImJ_T0038463.1 MGP_129S1SvImJ_G0021052.1 mouse_genomes_project 14 14317058 14352444 + MGP_129S1SvImJ_P0038463 Kat6b protein_coding protein_coding MGP_129S1SvImJ_T0038464.1 MGP_129S1SvImJ_G0021052.1 mouse_genomes_project 14 14317083 14461103 + Kat6b protein_coding processed_transcript MGP_129S1SvImJ_T0038465.1 MGP_129S1SvImJ_G0021052.1 mouse_genomes_project 14 14335300 14511654 + MGP_129S1SvImJ_P0038465 Kat6b protein_coding protein_coding MGP_129S1SvImJ_T0038466.1 MGP_129S1SvImJ_G0021052.1 mouse_genomes_project 14 14335315 14512061 + MGP_129S1SvImJ_P0038466 Kat6b protein_coding protein_coding MGP_129S1SvImJ_T0038467.1 MGP_129S1SvImJ_G0021052.1 mouse_genomes_project 14 14335384 14353976 + Kat6b protein_coding retained_intron MGP_129S1SvImJ_T0038468.1 MGP_129S1SvImJ_G0021052.1 mouse_genomes_project 14 14335398 14511716 + MGP_129S1SvImJ_P0038468 Kat6b protein_coding protein_coding MGP_129S1SvImJ_T0038469.1 MGP_129S1SvImJ_G0021052.1 mouse_genomes_project 14 14336383 14460523 + Kat6b protein_coding retained_intron MGP_129S1SvImJ_T0038470.1 MGP_129S1SvImJ_G0021052.1 mouse_genomes_project 14 14336415 14356107 + Kat6b protein_coding retained_intron MGP_129S1SvImJ_T0038471.1 MGP_129S1SvImJ_G0021052.1 mouse_genomes_project 14 14336419 14459727 + Kat6b protein_coding retained_intron MGP_129S1SvImJ_T0038472.1 MGP_129S1SvImJ_G0021052.1 mouse_genomes_project 14 14336422 14512061 + MGP_129S1SvImJ_P0038472 Kat6b protein_coding protein_coding MGP_129S1SvImJ_T0038473.1 MGP_129S1SvImJ_G0021052.1 mouse_genomes_project 14 14336545 14511836 + MGP_129S1SvImJ_P0038473 Kat6b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0038474.1 MGP_129S1SvImJ_G0021052.1 mouse_genomes_project 14 14352083 14510789 + MGP_129S1SvImJ_P0038474 Kat6b protein_coding protein_coding MGP_129S1SvImJ_T0038475.1 MGP_129S1SvImJ_G0021052.1 mouse_genomes_project 14 14461086 14464668 + Kat6b protein_coding retained_intron MGP_129S1SvImJ_T0038476.1 MGP_129S1SvImJ_G0021052.1 mouse_genomes_project 14 14461667 14473707 + Kat6b protein_coding retained_intron MGP_129S1SvImJ_T0098705.1 MGP_129S1SvImJ_G0036790.1 mouse_genomes_project 14 44758340 44758577 - Rprl2 ribozyme ribozyme MGP_129S1SvImJ_T0098498.1 MGP_129S1SvImJ_G0036583.1 mouse_genomes_project 14 70602135 70602227 - Gm24876 rRNA rRNA MGP_129S1SvImJ_T0039521.1 MGP_129S1SvImJ_G0021347.1 mouse_genomes_project 14 49572647 49582392 + MGP_129S1SvImJ_P0039521 Pck2 protein_coding protein_coding MGP_129S1SvImJ_T0002645.1 MGP_129S1SvImJ_G0002537.1 mouse_genomes_project 14 46932305 46932871 + MGP_129S1SvImJ_P0002645 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0039144.1 MGP_129S1SvImJ_G0021231.1 mouse_genomes_project 14 43126100 43150271 - MGP_129S1SvImJ_P0039144 1700011H14Rik protein_coding unknown_likely_coding MGP_129S1SvImJ_T0039145.1 MGP_129S1SvImJ_G0021231.1 mouse_genomes_project 14 43129968 43150316 - MGP_129S1SvImJ_P0039145 1700011H14Rik protein_coding protein_coding MGP_129S1SvImJ_T0039146.1 MGP_129S1SvImJ_G0021231.1 mouse_genomes_project 14 43130202 43150285 - MGP_129S1SvImJ_P0039146 1700011H14Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039147.1 MGP_129S1SvImJ_G0021231.1 mouse_genomes_project 14 43136422 43150285 - MGP_129S1SvImJ_P0039147 1700011H14Rik protein_coding protein_coding MGP_129S1SvImJ_T0039251.1 MGP_129S1SvImJ_G0021284.1 mouse_genomes_project 14 45940816 45943714 + MGP_129S1SvImJ_P0039251 Tppp2 protein_coding protein_coding MGP_129S1SvImJ_T0039252.1 MGP_129S1SvImJ_G0021284.1 mouse_genomes_project 14 45941783 45943714 + MGP_129S1SvImJ_P0039252 Tppp2 protein_coding protein_coding MGP_129S1SvImJ_T0040376.1 MGP_129S1SvImJ_G0021657.1 mouse_genomes_project 14 117979010 118142855 + MGP_129S1SvImJ_P0040376 Mbnl2 protein_coding protein_coding MGP_129S1SvImJ_T0040377.1 MGP_129S1SvImJ_G0021657.1 mouse_genomes_project 14 117979010 118142855 + MGP_129S1SvImJ_P0040377 Mbnl2 protein_coding protein_coding MGP_129S1SvImJ_T0040378.1 MGP_129S1SvImJ_G0021657.1 mouse_genomes_project 14 118031630 118142861 + MGP_129S1SvImJ_P0040378 Mbnl2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0000934.1 MGP_129S1SvImJ_G0000866.1 mouse_genomes_project 14 46291830 46298492 + TEC TEC MGP_129S1SvImJ_T0040103.1 MGP_129S1SvImJ_G0021555.1 mouse_genomes_project 14 67928035 68031136 - Rb1 protein_coding processed_transcript MGP_129S1SvImJ_T0040104.1 MGP_129S1SvImJ_G0021555.1 mouse_genomes_project 14 67932367 68071753 - MGP_129S1SvImJ_P0040104 Rb1 protein_coding protein_coding MGP_129S1SvImJ_T0040105.1 MGP_129S1SvImJ_G0021555.1 mouse_genomes_project 14 67933840 67940135 - Rb1 protein_coding retained_intron MGP_129S1SvImJ_T0040107.1 MGP_129S1SvImJ_G0021555.1 mouse_genomes_project 14 67976051 67977292 - Rb1 protein_coding processed_transcript MGP_129S1SvImJ_T0040108.1 MGP_129S1SvImJ_G0021555.1 mouse_genomes_project 14 68000941 68002895 - Rb1 protein_coding retained_intron MGP_129S1SvImJ_T0040109.1 MGP_129S1SvImJ_G0021555.1 mouse_genomes_project 14 68023344 68071572 - MGP_129S1SvImJ_P0040109 Rb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0002530.1 MGP_129S1SvImJ_G0002436.1 mouse_genomes_project 14 48084113 48084176 + MGP_129S1SvImJ_P0002530 Traj58 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0039970.1 MGP_129S1SvImJ_G0021510.1 mouse_genomes_project 14 63272226 63309962 - MGP_129S1SvImJ_P0039970 Adam7 protein_coding protein_coding MGP_129S1SvImJ_T0039971.1 MGP_129S1SvImJ_G0021510.1 mouse_genomes_project 14 63272736 63286027 - Adam7 protein_coding retained_intron MGP_129S1SvImJ_T0040164.1 MGP_129S1SvImJ_G0021579.1 mouse_genomes_project 14 71016669 71043525 + MGP_129S1SvImJ_P0040164 Nufip1 protein_coding protein_coding MGP_129S1SvImJ_T0099403.1 MGP_129S1SvImJ_G0037470.1 mouse_genomes_project 14 49726727 49726811 - Gm25887 snRNA snRNA MGP_129S1SvImJ_T0039375.1 MGP_129S1SvImJ_G0021306.1 mouse_genomes_project 14 48301252 48304940 + Oxa1l protein_coding retained_intron MGP_129S1SvImJ_T0039376.1 MGP_129S1SvImJ_G0021306.1 mouse_genomes_project 14 48301252 48310165 + MGP_129S1SvImJ_P0039376 Oxa1l protein_coding protein_coding MGP_129S1SvImJ_T0039377.1 MGP_129S1SvImJ_G0021306.1 mouse_genomes_project 14 48301456 48307527 + Oxa1l protein_coding retained_intron MGP_129S1SvImJ_T0038787.1 MGP_129S1SvImJ_G0021123.1 mouse_genomes_project 14 24392843 24406398 + MGP_129S1SvImJ_P0038787 Sema3g protein_coding protein_coding MGP_129S1SvImJ_T0002659.1 MGP_129S1SvImJ_G0002549.1 mouse_genomes_project 14 47219859 47220475 + MGP_129S1SvImJ_P0002659 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0039833.1 MGP_129S1SvImJ_G0021460.1 mouse_genomes_project 14 57889928 57905502 - MGP_129S1SvImJ_P0039833 Blk protein_coding unknown_likely_coding MGP_129S1SvImJ_T0002663.1 MGP_129S1SvImJ_G0002552.1 mouse_genomes_project 14 47322089 47322597 + MGP_129S1SvImJ_P0002663 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0038286.1 MGP_129S1SvImJ_G0020990.1 mouse_genomes_project 14 554028 565638 + MGP_129S1SvImJ_P0038286 Kctd6 protein_coding protein_coding MGP_129S1SvImJ_T0038287.1 MGP_129S1SvImJ_G0020990.1 mouse_genomes_project 14 554376 565632 + MGP_129S1SvImJ_P0038287 Kctd6 protein_coding protein_coding MGP_129S1SvImJ_T0039055.1 MGP_129S1SvImJ_G0021215.1 mouse_genomes_project 14 40496349 40510198 - MGP_129S1SvImJ_P0039055 Gmfb protein_coding protein_coding MGP_129S1SvImJ_T0039056.1 MGP_129S1SvImJ_G0021215.1 mouse_genomes_project 14 40496349 40510198 - MGP_129S1SvImJ_P0039056 Gmfb protein_coding protein_coding MGP_129S1SvImJ_T0039057.1 MGP_129S1SvImJ_G0021215.1 mouse_genomes_project 14 40502473 40507782 - MGP_129S1SvImJ_P0039057 Gmfb protein_coding protein_coding MGP_129S1SvImJ_T0100677.1 MGP_129S1SvImJ_G0038744.1 mouse_genomes_project 14 46242306 46242416 - Snord8 snoRNA snoRNA MGP_129S1SvImJ_T0000933.1 MGP_129S1SvImJ_G0000865.1 mouse_genomes_project 14 44906186 44907635 - TEC TEC MGP_129S1SvImJ_T0099382.1 MGP_129S1SvImJ_G0037449.1 mouse_genomes_project 14 6377778 6377875 + Gm25964 snRNA snRNA MGP_129S1SvImJ_T0006746.1 MGP_129S1SvImJ_G0005576.1 mouse_genomes_project 14 115953327 115989362 + 1700044C05Rik lincRNA lincRNA MGP_129S1SvImJ_T0038587.1 MGP_129S1SvImJ_G0021079.1 mouse_genomes_project 14 18929498 18936367 + MGP_129S1SvImJ_P0038587 protein_coding protein_coding MGP_129S1SvImJ_T0038592.1 MGP_129S1SvImJ_G0021079.1 mouse_genomes_project 14 18932578 18939757 + MGP_129S1SvImJ_P0038592 protein_coding protein_coding MGP_129S1SvImJ_T0039508.1 MGP_129S1SvImJ_G0021343.1 mouse_genomes_project 14 49506960 49518293 + MGP_129S1SvImJ_P0039508 Dhrs4 protein_coding protein_coding MGP_129S1SvImJ_T0013004.1 MGP_129S1SvImJ_G0011093.1 mouse_genomes_project 14 25506515 25507671 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100698.1 MGP_129S1SvImJ_G0038765.1 mouse_genomes_project 14 86078668 86078799 + Gm25495 snoRNA snoRNA MGP_129S1SvImJ_T0006691.1 MGP_129S1SvImJ_G0005535.1 mouse_genomes_project 14 33245494 33279598 + 1700109I08Rik lincRNA lincRNA MGP_129S1SvImJ_T0003612.1 MGP_129S1SvImJ_G0003274.1 mouse_genomes_project 14 120871974 120876213 + Gm15735 antisense antisense MGP_129S1SvImJ_T0040359.1 MGP_129S1SvImJ_G0021653.1 mouse_genomes_project 14 116560528 116606624 + MGP_129S1SvImJ_P0040359 Dnajc3 protein_coding protein_coding MGP_129S1SvImJ_T0013054.1 MGP_129S1SvImJ_G0011143.1 mouse_genomes_project 14 95576913 95577346 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039828.1 MGP_129S1SvImJ_G0021459.1 mouse_genomes_project 14 57689506 57747412 - MGP_129S1SvImJ_P0039828 Gata4 protein_coding protein_coding MGP_129S1SvImJ_T0039829.1 MGP_129S1SvImJ_G0021459.1 mouse_genomes_project 14 57689510 57747427 - MGP_129S1SvImJ_P0039829 Gata4 protein_coding protein_coding MGP_129S1SvImJ_T0039830.1 MGP_129S1SvImJ_G0021459.1 mouse_genomes_project 14 57743258 57776742 - MGP_129S1SvImJ_P0039830 Gata4 protein_coding protein_coding MGP_129S1SvImJ_T0039831.1 MGP_129S1SvImJ_G0021459.1 mouse_genomes_project 14 57743271 57776178 - MGP_129S1SvImJ_P0039831 Gata4 protein_coding protein_coding MGP_129S1SvImJ_T0039832.1 MGP_129S1SvImJ_G0021459.1 mouse_genomes_project 14 57743271 57776178 - MGP_129S1SvImJ_P0039832 Gata4 protein_coding protein_coding MGP_129S1SvImJ_T0038366.1 MGP_129S1SvImJ_G0021017.1 mouse_genomes_project 14 9069532 9213570 - MGP_129S1SvImJ_P0038366 Rarb protein_coding protein_coding MGP_129S1SvImJ_T0039894.1 MGP_129S1SvImJ_G0021487.1 mouse_genomes_project 14 60559569 60596057 - MGP_129S1SvImJ_P0039894 Scara3 protein_coding protein_coding MGP_129S1SvImJ_T0002527.1 MGP_129S1SvImJ_G0002434.1 mouse_genomes_project 14 48063699 48063758 + MGP_129S1SvImJ_P0002527 Trdj2 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0038554.1 MGP_129S1SvImJ_G0021066.1 mouse_genomes_project 14 18627722 18634035 + Ppif protein_coding retained_intron MGP_129S1SvImJ_T0038555.1 MGP_129S1SvImJ_G0021066.1 mouse_genomes_project 14 18627738 18634039 + MGP_129S1SvImJ_P0038555 Ppif protein_coding protein_coding MGP_129S1SvImJ_T0017433.1 MGP_129S1SvImJ_G0015273.1 mouse_genomes_project 14 62047821 62058838 - 1700120O09Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0039468.1 MGP_129S1SvImJ_G0021332.1 mouse_genomes_project 14 48915584 48918726 + MGP_129S1SvImJ_P0039468 Il25 protein_coding protein_coding MGP_129S1SvImJ_T0039659.1 MGP_129S1SvImJ_G0021391.1 mouse_genomes_project 14 50330220 50333625 - MGP_129S1SvImJ_P0039659 Gzmb protein_coding protein_coding MGP_129S1SvImJ_T0039983.1 MGP_129S1SvImJ_G0021519.1 mouse_genomes_project 14 64065397 64069300 - MGP_129S1SvImJ_P0039983 protein_coding protein_coding MGP_129S1SvImJ_T0010016.1 MGP_129S1SvImJ_G0008132.1 mouse_genomes_project 14 59153152 59153237 + Mir124a-1 miRNA miRNA MGP_129S1SvImJ_T0038853.1 MGP_129S1SvImJ_G0021139.1 mouse_genomes_project 14 25392830 25413029 + MGP_129S1SvImJ_P0038853 Gm6768 protein_coding protein_coding MGP_129S1SvImJ_T0038854.1 MGP_129S1SvImJ_G0021139.1 mouse_genomes_project 14 25392903 25409419 + MGP_129S1SvImJ_P0038854 Gm6768 protein_coding protein_coding MGP_129S1SvImJ_T0038855.1 MGP_129S1SvImJ_G0021139.1 mouse_genomes_project 14 25392946 25409304 + MGP_129S1SvImJ_P0038855 Gm6768 protein_coding protein_coding MGP_129S1SvImJ_T0038856.1 MGP_129S1SvImJ_G0021139.1 mouse_genomes_project 14 25398555 25413029 + MGP_129S1SvImJ_P0038856 Gm6768 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038857.1 MGP_129S1SvImJ_G0021139.1 mouse_genomes_project 14 25398757 25412421 + MGP_129S1SvImJ_P0038857 Gm6768 protein_coding protein_coding MGP_129S1SvImJ_T0038858.1 MGP_129S1SvImJ_G0021139.1 mouse_genomes_project 14 25398758 25405577 + MGP_129S1SvImJ_P0038858 Gm6768 protein_coding protein_coding MGP_129S1SvImJ_T0038859.1 MGP_129S1SvImJ_G0021139.1 mouse_genomes_project 14 25398758 25405873 + MGP_129S1SvImJ_P0038859 Gm6768 protein_coding protein_coding MGP_129S1SvImJ_T0038861.1 MGP_129S1SvImJ_G0021139.1 mouse_genomes_project 14 25399280 25405800 + MGP_129S1SvImJ_P0038861 Gm6768 protein_coding protein_coding MGP_129S1SvImJ_T0039976.1 MGP_129S1SvImJ_G0021514.1 mouse_genomes_project 14 63938639 63942400 + MGP_129S1SvImJ_P0039976 Nkx2-6 protein_coding protein_coding MGP_129S1SvImJ_T0040048.1 MGP_129S1SvImJ_G0021542.1 mouse_genomes_project 14 65202438 65206135 + MGP_129S1SvImJ_P0040048 Reep4 protein_coding protein_coding MGP_129S1SvImJ_T0038434.1 MGP_129S1SvImJ_G0021039.1 mouse_genomes_project 14 13315191 13372993 - MGP_129S1SvImJ_P0038434 Usp54 protein_coding protein_coding MGP_129S1SvImJ_T0038435.1 MGP_129S1SvImJ_G0021039.1 mouse_genomes_project 14 13315191 13384146 - MGP_129S1SvImJ_P0038435 Usp54 protein_coding protein_coding MGP_129S1SvImJ_T0038436.1 MGP_129S1SvImJ_G0021039.1 mouse_genomes_project 14 13343424 13352305 - MGP_129S1SvImJ_P0038436 Usp54 protein_coding protein_coding MGP_129S1SvImJ_T0038437.1 MGP_129S1SvImJ_G0021039.1 mouse_genomes_project 14 13347413 13371095 - Usp54 protein_coding retained_intron MGP_129S1SvImJ_T0038438.1 MGP_129S1SvImJ_G0021039.1 mouse_genomes_project 14 13349469 13384146 - Usp54 protein_coding retained_intron MGP_129S1SvImJ_T0013002.1 MGP_129S1SvImJ_G0011091.1 mouse_genomes_project 14 22286350 22286842 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013041.1 MGP_129S1SvImJ_G0011130.1 mouse_genomes_project 14 66502878 66503857 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002531.1 MGP_129S1SvImJ_G0002437.1 mouse_genomes_project 14 48085340 48085405 + Traj57 TR_J_gene processed_transcript MGP_129S1SvImJ_T0002532.1 MGP_129S1SvImJ_G0002437.1 mouse_genomes_project 14 48085342 48085405 + MGP_129S1SvImJ_P0002532 Traj57 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0038930.1 MGP_129S1SvImJ_G0021167.1 mouse_genomes_project 14 27482670 27491146 - MGP_129S1SvImJ_P0038930 Npy4r protein_coding protein_coding MGP_129S1SvImJ_T0099409.1 MGP_129S1SvImJ_G0037476.1 mouse_genomes_project 14 65079723 65079825 - Gm24890 snRNA snRNA MGP_129S1SvImJ_T0038279.1 MGP_129S1SvImJ_G0020986.1 mouse_genomes_project 14 334521 392218 + MGP_129S1SvImJ_P0038279 Abhd6 protein_coding protein_coding MGP_129S1SvImJ_T0038280.1 MGP_129S1SvImJ_G0020986.1 mouse_genomes_project 14 334585 391524 + MGP_129S1SvImJ_P0038280 Abhd6 protein_coding protein_coding MGP_129S1SvImJ_T0039157.1 MGP_129S1SvImJ_G0021235.1 mouse_genomes_project 14 43889369 43890375 - MGP_129S1SvImJ_P0039157 Olfr724 protein_coding protein_coding MGP_129S1SvImJ_T0039158.1 MGP_129S1SvImJ_G0021235.1 mouse_genomes_project 14 43889369 43892544 - MGP_129S1SvImJ_P0039158 Olfr724 protein_coding protein_coding MGP_129S1SvImJ_T0038928.1 MGP_129S1SvImJ_G0021166.1 mouse_genomes_project 14 27420917 27435428 + MGP_129S1SvImJ_P0038928 Anxa8 protein_coding protein_coding MGP_129S1SvImJ_T0038929.1 MGP_129S1SvImJ_G0021166.1 mouse_genomes_project 14 27420961 27434878 + MGP_129S1SvImJ_P0038929 Anxa8 protein_coding protein_coding MGP_129S1SvImJ_T0039119.1 MGP_129S1SvImJ_G0021226.1 mouse_genomes_project 14 42288617 42359818 + MGP_129S1SvImJ_P0039119 Tmem260 protein_coding protein_coding MGP_129S1SvImJ_T0039120.1 MGP_129S1SvImJ_G0021226.1 mouse_genomes_project 14 42288841 42344825 + Tmem260 protein_coding retained_intron MGP_129S1SvImJ_T0039121.1 MGP_129S1SvImJ_G0021226.1 mouse_genomes_project 14 42288871 42362161 + MGP_129S1SvImJ_P0039121 Tmem260 protein_coding protein_coding MGP_129S1SvImJ_T0039122.1 MGP_129S1SvImJ_G0021226.1 mouse_genomes_project 14 42288882 42359163 + MGP_129S1SvImJ_P0039122 Tmem260 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039123.1 MGP_129S1SvImJ_G0021226.1 mouse_genomes_project 14 42288887 42355406 + Tmem260 protein_coding retained_intron MGP_129S1SvImJ_T0006678.1 MGP_129S1SvImJ_G0005528.1 mouse_genomes_project 14 19314280 19354262 + 4933413J09Rik lincRNA lincRNA MGP_129S1SvImJ_T0006679.1 MGP_129S1SvImJ_G0005528.1 mouse_genomes_project 14 19315253 19369319 + 4933413J09Rik lincRNA lincRNA MGP_129S1SvImJ_T0006680.1 MGP_129S1SvImJ_G0005528.1 mouse_genomes_project 14 19315286 19333893 + 4933413J09Rik lincRNA lincRNA MGP_129S1SvImJ_T0006681.1 MGP_129S1SvImJ_G0005528.1 mouse_genomes_project 14 19320337 19335011 + 4933413J09Rik lincRNA lincRNA MGP_129S1SvImJ_T0006682.1 MGP_129S1SvImJ_G0005528.1 mouse_genomes_project 14 19322094 19334909 + 4933413J09Rik lincRNA lincRNA MGP_129S1SvImJ_T0006683.1 MGP_129S1SvImJ_G0005528.1 mouse_genomes_project 14 19322094 19365505 + 4933413J09Rik lincRNA lincRNA MGP_129S1SvImJ_T0039124.1 MGP_129S1SvImJ_G0021227.1 mouse_genomes_project 14 42519854 42527483 - MGP_129S1SvImJ_P0039124 Otx2 protein_coding protein_coding MGP_129S1SvImJ_T0039125.1 MGP_129S1SvImJ_G0021227.1 mouse_genomes_project 14 42520348 42525079 - MGP_129S1SvImJ_P0039125 Otx2 protein_coding protein_coding MGP_129S1SvImJ_T0039126.1 MGP_129S1SvImJ_G0021227.1 mouse_genomes_project 14 42520348 42529777 - MGP_129S1SvImJ_P0039126 Otx2 protein_coding protein_coding MGP_129S1SvImJ_T0039127.1 MGP_129S1SvImJ_G0021227.1 mouse_genomes_project 14 42521094 42524139 - MGP_129S1SvImJ_P0039127 Otx2 protein_coding protein_coding MGP_129S1SvImJ_T0039128.1 MGP_129S1SvImJ_G0021227.1 mouse_genomes_project 14 42521131 42529908 - MGP_129S1SvImJ_P0039128 Otx2 protein_coding protein_coding MGP_129S1SvImJ_T0039129.1 MGP_129S1SvImJ_G0021227.1 mouse_genomes_project 14 42521483 42529772 - MGP_129S1SvImJ_P0039129 Otx2 protein_coding protein_coding MGP_129S1SvImJ_T0039130.1 MGP_129S1SvImJ_G0021227.1 mouse_genomes_project 14 42523534 42529772 - MGP_129S1SvImJ_P0039130 Otx2 protein_coding protein_coding MGP_129S1SvImJ_T0039131.1 MGP_129S1SvImJ_G0021227.1 mouse_genomes_project 14 42523584 42527758 - MGP_129S1SvImJ_P0039131 Otx2 protein_coding protein_coding MGP_129S1SvImJ_T0099034.1 MGP_129S1SvImJ_G0037105.1 mouse_genomes_project 14 62415977 62417915 - Gm20667 sense_overlapping sense_overlapping MGP_129S1SvImJ_T0009987.1 MGP_129S1SvImJ_G0008103.1 mouse_genomes_project 14 3643656 3643741 + Mir5124b miRNA miRNA MGP_129S1SvImJ_T0039895.1 MGP_129S1SvImJ_G0021488.1 mouse_genomes_project 14 60610718 60623779 + MGP_129S1SvImJ_P0039895 Clu protein_coding protein_coding MGP_129S1SvImJ_T0039896.1 MGP_129S1SvImJ_G0021488.1 mouse_genomes_project 14 60610877 60617877 + MGP_129S1SvImJ_P0039896 Clu protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039897.1 MGP_129S1SvImJ_G0021488.1 mouse_genomes_project 14 60610889 60614769 + Clu protein_coding retained_intron MGP_129S1SvImJ_T0039898.1 MGP_129S1SvImJ_G0021488.1 mouse_genomes_project 14 60611953 60618192 + MGP_129S1SvImJ_P0039898 Clu protein_coding protein_coding MGP_129S1SvImJ_T0039899.1 MGP_129S1SvImJ_G0021488.1 mouse_genomes_project 14 60612855 60618096 + MGP_129S1SvImJ_P0039899 Clu protein_coding protein_coding MGP_129S1SvImJ_T0039900.1 MGP_129S1SvImJ_G0021488.1 mouse_genomes_project 14 60613035 60618073 + MGP_129S1SvImJ_P0039900 Clu protein_coding protein_coding MGP_129S1SvImJ_T0039901.1 MGP_129S1SvImJ_G0021488.1 mouse_genomes_project 14 60613289 60618008 + MGP_129S1SvImJ_P0039901 Clu protein_coding protein_coding MGP_129S1SvImJ_T0039902.1 MGP_129S1SvImJ_G0021488.1 mouse_genomes_project 14 60613534 60617194 + MGP_129S1SvImJ_P0039902 Clu protein_coding protein_coding MGP_129S1SvImJ_T0039903.1 MGP_129S1SvImJ_G0021488.1 mouse_genomes_project 14 60616900 60618205 + Clu protein_coding retained_intron MGP_129S1SvImJ_T0003540.1 MGP_129S1SvImJ_G0003222.1 mouse_genomes_project 14 13156793 13157365 + 7330404K18Rik antisense antisense MGP_129S1SvImJ_T0099383.1 MGP_129S1SvImJ_G0037450.1 mouse_genomes_project 14 10673360 10673423 + Gm27851 snRNA snRNA MGP_129S1SvImJ_T0098317.1 MGP_129S1SvImJ_G0036402.1 mouse_genomes_project 14 13836191 13846176 - pseudogene pseudogene MGP_129S1SvImJ_T0039905.1 MGP_129S1SvImJ_G0021490.1 mouse_genomes_project 14 60671827 60728529 - MGP_129S1SvImJ_P0039905 Adam2 protein_coding protein_coding MGP_129S1SvImJ_T0002736.1 MGP_129S1SvImJ_G0002611.1 mouse_genomes_project 14 47173522 47173791 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0038370.1 MGP_129S1SvImJ_G0021019.1 mouse_genomes_project 14 10877054 10881343 - MGP_129S1SvImJ_P0038370 Rpl15 protein_coding protein_coding MGP_129S1SvImJ_T0038371.1 MGP_129S1SvImJ_G0021019.1 mouse_genomes_project 14 10879582 10881667 - MGP_129S1SvImJ_P0038371 Rpl15 protein_coding protein_coding MGP_129S1SvImJ_T0100669.1 MGP_129S1SvImJ_G0038736.1 mouse_genomes_project 14 24182796 24182872 - Snord19 snoRNA snoRNA MGP_129S1SvImJ_T0038329.1 MGP_129S1SvImJ_G0021002.1 mouse_genomes_project 14 6172669 6185219 + MGP_129S1SvImJ_P0038329 Sntn protein_coding protein_coding MGP_129S1SvImJ_T0038351.1 MGP_129S1SvImJ_G0021013.1 mouse_genomes_project 14 7962038 8047976 - MGP_129S1SvImJ_P0038351 Lrrc3b protein_coding protein_coding MGP_129S1SvImJ_T0038352.1 MGP_129S1SvImJ_G0021013.1 mouse_genomes_project 14 7962039 8045477 - MGP_129S1SvImJ_P0038352 Lrrc3b protein_coding protein_coding MGP_129S1SvImJ_T0002564.1 MGP_129S1SvImJ_G0002467.1 mouse_genomes_project 14 48124392 48124452 + MGP_129S1SvImJ_P0002564 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0040216.1 MGP_129S1SvImJ_G0021600.1 mouse_genomes_project 14 74611081 74714808 + MGP_129S1SvImJ_P0040216 Elf1 protein_coding protein_coding MGP_129S1SvImJ_T0040217.1 MGP_129S1SvImJ_G0021600.1 mouse_genomes_project 14 74645345 74714807 + MGP_129S1SvImJ_P0040217 Elf1 protein_coding protein_coding MGP_129S1SvImJ_T0002601.1 MGP_129S1SvImJ_G0002502.1 mouse_genomes_project 14 48090030 48090084 + TR_J_pseudogene TR_J_pseudogene MGP_129S1SvImJ_T0039889.1 MGP_129S1SvImJ_G0021485.1 mouse_genomes_project 14 60452814 60467770 - MGP_129S1SvImJ_P0039889 Esco2 protein_coding protein_coding MGP_129S1SvImJ_T0039890.1 MGP_129S1SvImJ_G0021485.1 mouse_genomes_project 14 60459784 60460980 - Esco2 protein_coding processed_transcript MGP_129S1SvImJ_T0039891.1 MGP_129S1SvImJ_G0021485.1 mouse_genomes_project 14 60460733 60462721 - Esco2 protein_coding processed_transcript MGP_129S1SvImJ_T0039469.1 MGP_129S1SvImJ_G0021333.1 mouse_genomes_project 14 48919358 48921935 + MGP_129S1SvImJ_P0039469 Cmtm5 protein_coding protein_coding MGP_129S1SvImJ_T0003555.1 MGP_129S1SvImJ_G0003230.1 mouse_genomes_project 14 19608570 19620450 - Arf4os antisense antisense MGP_129S1SvImJ_T0039476.1 MGP_129S1SvImJ_G0021335.1 mouse_genomes_project 14 48956582 48986862 - MGP_129S1SvImJ_P0039476 Myh7 protein_coding protein_coding MGP_129S1SvImJ_T0039477.1 MGP_129S1SvImJ_G0021335.1 mouse_genomes_project 14 48956659 48986854 - MGP_129S1SvImJ_P0039477 Myh7 protein_coding protein_coding MGP_129S1SvImJ_T0039479.1 MGP_129S1SvImJ_G0021335.1 mouse_genomes_project 14 48971731 48980020 - Myh7 protein_coding retained_intron MGP_129S1SvImJ_T0039480.1 MGP_129S1SvImJ_G0021335.1 mouse_genomes_project 14 48984943 48986776 - MGP_129S1SvImJ_P0039480 Myh7 protein_coding protein_coding MGP_129S1SvImJ_T0099408.1 MGP_129S1SvImJ_G0037475.1 mouse_genomes_project 14 57587798 57587885 + Gm23629 snRNA snRNA MGP_129S1SvImJ_T0002673.1 MGP_129S1SvImJ_G0002559.1 mouse_genomes_project 14 47463897 47464469 + MGP_129S1SvImJ_P0002673 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0006713.1 MGP_129S1SvImJ_G0005551.1 mouse_genomes_project 14 49916167 49929223 - Gm26751 lincRNA lincRNA MGP_129S1SvImJ_T0100702.1 MGP_129S1SvImJ_G0038769.1 mouse_genomes_project 14 90923164 90923290 + Gm24680 snoRNA snoRNA MGP_129S1SvImJ_T0002565.1 MGP_129S1SvImJ_G0002468.1 mouse_genomes_project 14 48125559 48125619 + MGP_129S1SvImJ_P0002565 Traj22 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0039876.1 MGP_129S1SvImJ_G0021478.1 mouse_genomes_project 14 59867067 59917784 + MGP_129S1SvImJ_P0039876 Fbxo16 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0039877.1 MGP_129S1SvImJ_G0021478.1 mouse_genomes_project 14 59867078 59917860 + MGP_129S1SvImJ_P0039877 Fbxo16 protein_coding protein_coding MGP_129S1SvImJ_T0039906.1 MGP_129S1SvImJ_G0021491.1 mouse_genomes_project 14 60739212 60780074 - MGP_129S1SvImJ_P0039906 Ephx2 protein_coding protein_coding MGP_129S1SvImJ_T0002552.1 MGP_129S1SvImJ_G0002455.1 mouse_genomes_project 14 48112177 48112239 + MGP_129S1SvImJ_P0002552 Traj35 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0011394.1 MGP_129S1SvImJ_G0009510.1 mouse_genomes_project 14 50627060 50627167 + Gm22431 misc_RNA misc_RNA MGP_129S1SvImJ_T0039217.1 MGP_129S1SvImJ_G0021271.1 mouse_genomes_project 14 45054547 45069511 + MGP_129S1SvImJ_P0039217 Ang protein_coding protein_coding MGP_129S1SvImJ_T0039219.1 MGP_129S1SvImJ_G0021271.1 mouse_genomes_project 14 45061496 45069511 + MGP_129S1SvImJ_P0039219 Ang protein_coding protein_coding MGP_129S1SvImJ_T0003556.1 MGP_129S1SvImJ_G0003231.1 mouse_genomes_project 14 19652149 19652647 + 9930004E17Rik antisense antisense MGP_129S1SvImJ_T0039928.1 MGP_129S1SvImJ_G0021496.1 mouse_genomes_project 14 61320795 61424677 + MGP_129S1SvImJ_P0039928 Adra1a protein_coding protein_coding MGP_129S1SvImJ_T0039929.1 MGP_129S1SvImJ_G0021496.1 mouse_genomes_project 14 61320802 61424541 + MGP_129S1SvImJ_P0039929 Adra1a protein_coding protein_coding MGP_129S1SvImJ_T0039930.1 MGP_129S1SvImJ_G0021496.1 mouse_genomes_project 14 61320853 61325872 + Adra1a protein_coding retained_intron MGP_129S1SvImJ_T0039931.1 MGP_129S1SvImJ_G0021496.1 mouse_genomes_project 14 61320885 61421197 + MGP_129S1SvImJ_P0039931 Adra1a protein_coding protein_coding MGP_129S1SvImJ_T0039932.1 MGP_129S1SvImJ_G0021496.1 mouse_genomes_project 14 61321100 61423953 + MGP_129S1SvImJ_P0039932 Adra1a protein_coding protein_coding MGP_129S1SvImJ_T0099407.1 MGP_129S1SvImJ_G0037474.1 mouse_genomes_project 14 55723167 55723271 - Gm25716 snRNA snRNA MGP_129S1SvImJ_T0038839.1 MGP_129S1SvImJ_G0021137.1 mouse_genomes_project 14 25312449 25319346 + MGP_129S1SvImJ_P0038839 Oxnad1 protein_coding protein_coding MGP_129S1SvImJ_T0038840.1 MGP_129S1SvImJ_G0021137.1 mouse_genomes_project 14 25312451 25324214 + MGP_129S1SvImJ_P0038840 Oxnad1 protein_coding protein_coding MGP_129S1SvImJ_T0038841.1 MGP_129S1SvImJ_G0021137.1 mouse_genomes_project 14 25312488 25330867 + MGP_129S1SvImJ_P0038841 Oxnad1 protein_coding protein_coding MGP_129S1SvImJ_T0038842.1 MGP_129S1SvImJ_G0021137.1 mouse_genomes_project 14 25312862 25327301 + MGP_129S1SvImJ_P0038842 Oxnad1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038843.1 MGP_129S1SvImJ_G0021137.1 mouse_genomes_project 14 25312886 25330867 + MGP_129S1SvImJ_P0038843 Oxnad1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038844.1 MGP_129S1SvImJ_G0021137.1 mouse_genomes_project 14 25312901 25327170 + MGP_129S1SvImJ_P0038844 Oxnad1 protein_coding protein_coding MGP_129S1SvImJ_T0038845.1 MGP_129S1SvImJ_G0021137.1 mouse_genomes_project 14 25312909 25327712 + Oxnad1 protein_coding retained_intron MGP_129S1SvImJ_T0038846.1 MGP_129S1SvImJ_G0021137.1 mouse_genomes_project 14 25312909 25324294 + MGP_129S1SvImJ_P0038846 Oxnad1 protein_coding protein_coding MGP_129S1SvImJ_T0038847.1 MGP_129S1SvImJ_G0021137.1 mouse_genomes_project 14 25312952 25324254 + MGP_129S1SvImJ_P0038847 Oxnad1 protein_coding protein_coding MGP_129S1SvImJ_T0038848.1 MGP_129S1SvImJ_G0021137.1 mouse_genomes_project 14 25323068 25330320 + MGP_129S1SvImJ_P0038848 Oxnad1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038849.1 MGP_129S1SvImJ_G0021137.1 mouse_genomes_project 14 25323131 25330517 + MGP_129S1SvImJ_P0038849 Oxnad1 protein_coding protein_coding MGP_129S1SvImJ_T0038850.1 MGP_129S1SvImJ_G0021137.1 mouse_genomes_project 14 25328487 25329947 + Oxnad1 protein_coding retained_intron MGP_129S1SvImJ_T0039398.1 MGP_129S1SvImJ_G0021311.1 mouse_genomes_project 14 48428763 48433072 + MGP_129S1SvImJ_P0039398 Rem2 protein_coding protein_coding MGP_129S1SvImJ_T0039399.1 MGP_129S1SvImJ_G0021311.1 mouse_genomes_project 14 48428904 48430559 + Rem2 protein_coding retained_intron MGP_129S1SvImJ_T0039400.1 MGP_129S1SvImJ_G0021311.1 mouse_genomes_project 14 48428916 48432318 + MGP_129S1SvImJ_P0039400 Rem2 protein_coding protein_coding MGP_129S1SvImJ_T0039401.1 MGP_129S1SvImJ_G0021311.1 mouse_genomes_project 14 48430135 48431756 + MGP_129S1SvImJ_P0039401 Rem2 protein_coding protein_coding MGP_129S1SvImJ_T0006704.1 MGP_129S1SvImJ_G0005545.1 mouse_genomes_project 14 44824604 44831563 + Gm26782 lincRNA lincRNA MGP_129S1SvImJ_T0006705.1 MGP_129S1SvImJ_G0005545.1 mouse_genomes_project 14 44824616 44833103 + Gm26782 lincRNA lincRNA MGP_129S1SvImJ_T0040111.1 MGP_129S1SvImJ_G0021558.1 mouse_genomes_project 14 68267233 68275735 + MGP_129S1SvImJ_P0040111 Med4 protein_coding protein_coding MGP_129S1SvImJ_T0040192.1 MGP_129S1SvImJ_G0021587.1 mouse_genomes_project 14 72929645 73033084 + MGP_129S1SvImJ_P0040192 Epsti1 protein_coding protein_coding MGP_129S1SvImJ_T0040193.1 MGP_129S1SvImJ_G0021587.1 mouse_genomes_project 14 72929813 72991964 + MGP_129S1SvImJ_P0040193 Epsti1 protein_coding protein_coding MGP_129S1SvImJ_T0098503.1 MGP_129S1SvImJ_G0036588.1 mouse_genomes_project 14 107055508 107055619 + n-R5s50 rRNA rRNA MGP_129S1SvImJ_T0006736.1 MGP_129S1SvImJ_G0005568.1 mouse_genomes_project 14 71451783 71458151 - 4930444M15Rik lincRNA lincRNA MGP_129S1SvImJ_T0006697.1 MGP_129S1SvImJ_G0005541.1 mouse_genomes_project 14 40520322 40523777 - Gm10101 lincRNA lincRNA MGP_129S1SvImJ_T0006698.1 MGP_129S1SvImJ_G0005541.1 mouse_genomes_project 14 40520327 40523777 - Gm10101 lincRNA lincRNA MGP_129S1SvImJ_T0006677.1 MGP_129S1SvImJ_G0005527.1 mouse_genomes_project 14 18478457 18484423 - Gm26772 lincRNA lincRNA MGP_129S1SvImJ_T0002734.1 MGP_129S1SvImJ_G0002609.1 mouse_genomes_project 14 47077189 47077357 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0039820.1 MGP_129S1SvImJ_G0021455.1 mouse_genomes_project 14 57528871 57530491 + MGP_129S1SvImJ_P0039820 Defb42 protein_coding protein_coding MGP_129S1SvImJ_T0039821.1 MGP_129S1SvImJ_G0021455.1 mouse_genomes_project 14 57528909 57541066 + Defb42 protein_coding processed_transcript MGP_129S1SvImJ_T0039822.1 MGP_129S1SvImJ_G0021455.1 mouse_genomes_project 14 57528974 57530439 + MGP_129S1SvImJ_P0039822 Defb42 protein_coding protein_coding MGP_129S1SvImJ_T0039823.1 MGP_129S1SvImJ_G0021455.1 mouse_genomes_project 14 57530109 57530456 + MGP_129S1SvImJ_P0039823 Defb42 protein_coding protein_coding MGP_129S1SvImJ_T0039824.1 MGP_129S1SvImJ_G0021455.1 mouse_genomes_project 14 57537995 57539857 + Defb42 protein_coding processed_transcript MGP_129S1SvImJ_T0098318.1 MGP_129S1SvImJ_G0036403.1 mouse_genomes_project 14 99463417 99467734 - pseudogene pseudogene MGP_129S1SvImJ_T0038288.1 MGP_129S1SvImJ_G0020991.1 mouse_genomes_project 14 567469 601821 - MGP_129S1SvImJ_P0038288 Acox2 protein_coding protein_coding MGP_129S1SvImJ_T0038289.1 MGP_129S1SvImJ_G0020991.1 mouse_genomes_project 14 567469 602342 - MGP_129S1SvImJ_P0038289 Acox2 protein_coding protein_coding MGP_129S1SvImJ_T0038290.1 MGP_129S1SvImJ_G0020991.1 mouse_genomes_project 14 582472 589356 - Acox2 protein_coding processed_transcript MGP_129S1SvImJ_T0038291.1 MGP_129S1SvImJ_G0020991.1 mouse_genomes_project 14 586653 589383 - Acox2 protein_coding retained_intron MGP_129S1SvImJ_T0038292.1 MGP_129S1SvImJ_G0020991.1 mouse_genomes_project 14 590827 596503 - Acox2 protein_coding retained_intron MGP_129S1SvImJ_T0038293.1 MGP_129S1SvImJ_G0020991.1 mouse_genomes_project 14 596522 600854 - MGP_129S1SvImJ_P0038293 Acox2 protein_coding protein_coding MGP_129S1SvImJ_T0038294.1 MGP_129S1SvImJ_G0020991.1 mouse_genomes_project 14 598173 601137 - Acox2 protein_coding processed_transcript MGP_129S1SvImJ_T0038295.1 MGP_129S1SvImJ_G0020991.1 mouse_genomes_project 14 598905 599917 - Acox2 protein_coding retained_intron MGP_129S1SvImJ_T0039132.1 MGP_129S1SvImJ_G0021228.1 mouse_genomes_project 14 42906447 42967388 - MGP_129S1SvImJ_P0039132 Exoc5 protein_coding protein_coding MGP_129S1SvImJ_T0039133.1 MGP_129S1SvImJ_G0021228.1 mouse_genomes_project 14 42908093 42967131 - MGP_129S1SvImJ_P0039133 Exoc5 protein_coding protein_coding MGP_129S1SvImJ_T0039134.1 MGP_129S1SvImJ_G0021228.1 mouse_genomes_project 14 42909811 42914110 - Exoc5 protein_coding retained_intron MGP_129S1SvImJ_T0039135.1 MGP_129S1SvImJ_G0021228.1 mouse_genomes_project 14 42911093 42917587 - MGP_129S1SvImJ_P0039135 Exoc5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039136.1 MGP_129S1SvImJ_G0021228.1 mouse_genomes_project 14 42911799 42917851 - Exoc5 protein_coding retained_intron MGP_129S1SvImJ_T0039137.1 MGP_129S1SvImJ_G0021228.1 mouse_genomes_project 14 42923896 42929717 - Exoc5 protein_coding retained_intron MGP_129S1SvImJ_T0039138.1 MGP_129S1SvImJ_G0021228.1 mouse_genomes_project 14 42929169 42949648 - MGP_129S1SvImJ_P0039138 Exoc5 protein_coding protein_coding MGP_129S1SvImJ_T0006666.1 MGP_129S1SvImJ_G0005519.1 mouse_genomes_project 14 8046602 8061391 + B230110C06Rik lincRNA lincRNA MGP_129S1SvImJ_T0006667.1 MGP_129S1SvImJ_G0005519.1 mouse_genomes_project 14 8047171 8060853 + B230110C06Rik lincRNA lincRNA MGP_129S1SvImJ_T0011387.1 MGP_129S1SvImJ_G0009503.1 mouse_genomes_project 14 24727503 24727805 - Gm24057 misc_RNA misc_RNA MGP_129S1SvImJ_T0040007.1 MGP_129S1SvImJ_G0021530.1 mouse_genomes_project 14 64759341 64775007 - MGP_129S1SvImJ_P0040007 Ccar2 protein_coding protein_coding MGP_129S1SvImJ_T0039973.1 MGP_129S1SvImJ_G0021512.1 mouse_genomes_project 14 63376428 63426671 - MGP_129S1SvImJ_P0039973 Adam28 protein_coding protein_coding MGP_129S1SvImJ_T0039974.1 MGP_129S1SvImJ_G0021512.1 mouse_genomes_project 14 63377278 63426671 - MGP_129S1SvImJ_P0039974 Adam28 protein_coding protein_coding MGP_129S1SvImJ_T0038619.1 MGP_129S1SvImJ_G0021084.1 mouse_genomes_project 14 19642068 19652023 - MGP_129S1SvImJ_P0038619 Pde12 protein_coding protein_coding MGP_129S1SvImJ_T0099402.1 MGP_129S1SvImJ_G0037469.1 mouse_genomes_project 14 48542622 48542730 + Gm24705 snRNA snRNA MGP_129S1SvImJ_T0099396.1 MGP_129S1SvImJ_G0037463.1 mouse_genomes_project 14 42896018 42896138 - Gm23470 snRNA snRNA MGP_129S1SvImJ_T0039159.1 MGP_129S1SvImJ_G0021236.1 mouse_genomes_project 14 43995377 44005841 - MGP_129S1SvImJ_P0039159 protein_coding protein_coding MGP_129S1SvImJ_T0013005.1 MGP_129S1SvImJ_G0011094.1 mouse_genomes_project 14 26169374 26170385 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100679.1 MGP_129S1SvImJ_G0038746.1 mouse_genomes_project 14 49167600 49167732 - Gm23596 snoRNA snoRNA MGP_129S1SvImJ_T0010014.1 MGP_129S1SvImJ_G0008130.1 mouse_genomes_project 14 57333264 57333374 + Mir6541 miRNA miRNA MGP_129S1SvImJ_T0039446.1 MGP_129S1SvImJ_G0021325.1 mouse_genomes_project 14 48827053 48834839 - MGP_129S1SvImJ_P0039446 Homez protein_coding protein_coding MGP_129S1SvImJ_T0039447.1 MGP_129S1SvImJ_G0021325.1 mouse_genomes_project 14 48828108 48839702 - MGP_129S1SvImJ_P0039447 Homez protein_coding protein_coding MGP_129S1SvImJ_T0039448.1 MGP_129S1SvImJ_G0021325.1 mouse_genomes_project 14 48829894 48831536 - MGP_129S1SvImJ_P0039448 Homez protein_coding protein_coding MGP_129S1SvImJ_T0039449.1 MGP_129S1SvImJ_G0021325.1 mouse_genomes_project 14 48832247 48847051 - MGP_129S1SvImJ_P0039449 Homez protein_coding protein_coding MGP_129S1SvImJ_T0039226.1 MGP_129S1SvImJ_G0021278.1 mouse_genomes_project 14 45235326 45236092 - MGP_129S1SvImJ_P0039226 Rnase2a protein_coding protein_coding MGP_129S1SvImJ_T0013000.1 MGP_129S1SvImJ_G0011089.1 mouse_genomes_project 14 19538132 19538930 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003613.1 MGP_129S1SvImJ_G0003275.1 mouse_genomes_project 14 121895155 121896565 + Gm28932 antisense antisense MGP_129S1SvImJ_T0039872.1 MGP_129S1SvImJ_G0021475.1 mouse_genomes_project 14 59531799 59627381 + MGP_129S1SvImJ_P0039872 Ints9 protein_coding protein_coding MGP_129S1SvImJ_T0039161.1 MGP_129S1SvImJ_G0021238.1 mouse_genomes_project 14 44056880 44057852 - MGP_129S1SvImJ_P0039161 Olfr729 protein_coding protein_coding MGP_129S1SvImJ_T0040260.1 MGP_129S1SvImJ_G0021620.1 mouse_genomes_project 14 97590692 97593072 - MGP_129S1SvImJ_P0040260 Prr30 protein_coding protein_coding MGP_129S1SvImJ_T0040261.1 MGP_129S1SvImJ_G0021620.1 mouse_genomes_project 14 97590700 97593333 - MGP_129S1SvImJ_P0040261 Prr30 protein_coding protein_coding MGP_129S1SvImJ_T0100674.1 MGP_129S1SvImJ_G0038741.1 mouse_genomes_project 14 30721044 30721177 + Gm22469 snoRNA snoRNA MGP_129S1SvImJ_T0003607.1 MGP_129S1SvImJ_G0003271.1 mouse_genomes_project 14 100214259 100220719 - Slain1os antisense antisense MGP_129S1SvImJ_T0000929.1 MGP_129S1SvImJ_G0000861.1 mouse_genomes_project 14 14778813 14799087 + TEC TEC MGP_129S1SvImJ_T0000936.1 MGP_129S1SvImJ_G0000868.1 mouse_genomes_project 14 48856805 48860901 + TEC TEC MGP_129S1SvImJ_T0003585.1 MGP_129S1SvImJ_G0003256.1 mouse_genomes_project 14 55669859 55682149 - 1700109G14Rik antisense antisense MGP_129S1SvImJ_T0003586.1 MGP_129S1SvImJ_G0003256.1 mouse_genomes_project 14 55671549 55696273 - 1700109G14Rik antisense antisense MGP_129S1SvImJ_T0003587.1 MGP_129S1SvImJ_G0003256.1 mouse_genomes_project 14 55681639 55682123 - 1700109G14Rik antisense antisense MGP_129S1SvImJ_T0002563.1 MGP_129S1SvImJ_G0002466.1 mouse_genomes_project 14 48123949 48124012 + MGP_129S1SvImJ_P0002563 Traj24 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0038714.1 MGP_129S1SvImJ_G0021114.1 mouse_genomes_project 14 24161718 24163502 - MGP_129S1SvImJ_P0038714 Spcs1 protein_coding protein_coding MGP_129S1SvImJ_T0038715.1 MGP_129S1SvImJ_G0021114.1 mouse_genomes_project 14 24161718 24163565 - MGP_129S1SvImJ_P0038715 Spcs1 protein_coding protein_coding MGP_129S1SvImJ_T0038716.1 MGP_129S1SvImJ_G0021114.1 mouse_genomes_project 14 24161719 24163559 - MGP_129S1SvImJ_P0038716 Spcs1 protein_coding protein_coding MGP_129S1SvImJ_T0038717.1 MGP_129S1SvImJ_G0021114.1 mouse_genomes_project 14 24161719 24163256 - MGP_129S1SvImJ_P0038717 Spcs1 protein_coding protein_coding MGP_129S1SvImJ_T0038718.1 MGP_129S1SvImJ_G0021114.1 mouse_genomes_project 14 24161720 24163262 - Spcs1 protein_coding retained_intron MGP_129S1SvImJ_T0038719.1 MGP_129S1SvImJ_G0021114.1 mouse_genomes_project 14 24162109 24163243 - Spcs1 protein_coding retained_intron MGP_129S1SvImJ_T0038720.1 MGP_129S1SvImJ_G0021114.1 mouse_genomes_project 14 24162288 24163260 - MGP_129S1SvImJ_P0038720 Spcs1 protein_coding protein_coding MGP_129S1SvImJ_T0040054.1 MGP_129S1SvImJ_G0021544.1 mouse_genomes_project 14 65235859 65240581 + MGP_129S1SvImJ_P0040054 Nudt18 protein_coding protein_coding MGP_129S1SvImJ_T0038638.1 MGP_129S1SvImJ_G0021092.1 mouse_genomes_project 14 20444553 20498295 + MGP_129S1SvImJ_P0038638 Fam208a protein_coding protein_coding MGP_129S1SvImJ_T0039852.1 MGP_129S1SvImJ_G0021469.1 mouse_genomes_project 14 58640080 58650056 - MGP_129S1SvImJ_P0039852 Prss55 protein_coding protein_coding MGP_129S1SvImJ_T0039853.1 MGP_129S1SvImJ_G0021469.1 mouse_genomes_project 14 58640087 58650013 - MGP_129S1SvImJ_P0039853 Prss55 protein_coding protein_coding MGP_129S1SvImJ_T0039854.1 MGP_129S1SvImJ_G0021469.1 mouse_genomes_project 14 58643977 58654740 - Prss55 protein_coding processed_transcript MGP_129S1SvImJ_T0006714.1 MGP_129S1SvImJ_G0005552.1 mouse_genomes_project 14 50791896 50794978 - Gm16973 lincRNA lincRNA MGP_129S1SvImJ_T0006715.1 MGP_129S1SvImJ_G0005552.1 mouse_genomes_project 14 50792963 50796885 - Gm16973 lincRNA lincRNA MGP_129S1SvImJ_T0010003.1 MGP_129S1SvImJ_G0008119.1 mouse_genomes_project 14 43503557 43503662 - Gm22949 miRNA miRNA MGP_129S1SvImJ_T0038406.1 MGP_129S1SvImJ_G0021031.1 mouse_genomes_project 14 13064538 13094471 - MGP_129S1SvImJ_P0038406 Ecd protein_coding protein_coding MGP_129S1SvImJ_T0006716.1 MGP_129S1SvImJ_G0005553.1 mouse_genomes_project 14 51772627 51773372 + 1700039M10Rik lincRNA lincRNA MGP_129S1SvImJ_T0039768.1 MGP_129S1SvImJ_G0021432.1 mouse_genomes_project 14 54717638 54720355 + MGP_129S1SvImJ_P0039768 Amer2 protein_coding protein_coding MGP_129S1SvImJ_T0040257.1 MGP_129S1SvImJ_G0021617.1 mouse_genomes_project 14 95371799 95533047 + MGP_129S1SvImJ_P0040257 Pibf1 protein_coding protein_coding MGP_129S1SvImJ_T0006734.1 MGP_129S1SvImJ_G0005566.1 mouse_genomes_project 14 65524252 65545106 + 2410012E07Rik lincRNA lincRNA MGP_129S1SvImJ_T0000937.1 MGP_129S1SvImJ_G0000869.1 mouse_genomes_project 14 49083671 49085853 - TEC TEC MGP_129S1SvImJ_T0003569.1 MGP_129S1SvImJ_G0003244.1 mouse_genomes_project 14 48000234 48058986 - Gm42877 antisense antisense MGP_129S1SvImJ_T0003570.1 MGP_129S1SvImJ_G0003244.1 mouse_genomes_project 14 48038414 48059046 - Gm42877 antisense antisense MGP_129S1SvImJ_T0040200.1 MGP_129S1SvImJ_G0021591.1 mouse_genomes_project 14 73637053 73804330 - MGP_129S1SvImJ_P0040200 Dgkh protein_coding protein_coding MGP_129S1SvImJ_T0040006.1 MGP_129S1SvImJ_G0021529.1 mouse_genomes_project 14 64720269 64759356 + MGP_129S1SvImJ_P0040006 Bin3 protein_coding protein_coding MGP_129S1SvImJ_T0039797.1 MGP_129S1SvImJ_G0021444.1 mouse_genomes_project 14 56704722 56724774 - MGP_129S1SvImJ_P0039797 Dleu7 protein_coding protein_coding MGP_129S1SvImJ_T0038449.1 MGP_129S1SvImJ_G0021047.1 mouse_genomes_project 14 13503493 13570924 - MGP_129S1SvImJ_P0038449 Camk2g protein_coding protein_coding MGP_129S1SvImJ_T0040119.1 MGP_129S1SvImJ_G0021562.1 mouse_genomes_project 14 69425434 69494424 + MGP_129S1SvImJ_P0040119 Htr2a protein_coding protein_coding MGP_129S1SvImJ_T0040113.1 MGP_129S1SvImJ_G0021560.1 mouse_genomes_project 14 68279255 68283032 - MGP_129S1SvImJ_P0040113 protein_coding protein_coding MGP_129S1SvImJ_T0006661.1 MGP_129S1SvImJ_G0005517.1 mouse_genomes_project 14 1016269 1023219 + 4930455B14Rik lincRNA lincRNA MGP_129S1SvImJ_T0006662.1 MGP_129S1SvImJ_G0005517.1 mouse_genomes_project 14 1016269 1023277 + 4930455B14Rik lincRNA lincRNA MGP_129S1SvImJ_T0038887.1 MGP_129S1SvImJ_G0021149.1 mouse_genomes_project 14 25917700 25951284 - MGP_129S1SvImJ_P0038887 3425401B19Rik protein_coding protein_coding MGP_129S1SvImJ_T0013040.1 MGP_129S1SvImJ_G0011129.1 mouse_genomes_project 14 64369742 64371850 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100687.1 MGP_129S1SvImJ_G0038754.1 mouse_genomes_project 14 59328956 59329092 + Gm26225 snoRNA snoRNA MGP_129S1SvImJ_T0039303.1 MGP_129S1SvImJ_G0021292.1 mouse_genomes_project 14 46192698 46229529 - MGP_129S1SvImJ_P0039303 Supt16 protein_coding protein_coding MGP_129S1SvImJ_T0040334.1 MGP_129S1SvImJ_G0021639.1 mouse_genomes_project 14 102676972 102677377 - MGP_129S1SvImJ_P0040334 Gm4775 protein_coding protein_coding MGP_129S1SvImJ_T0039992.1 MGP_129S1SvImJ_G0021522.1 mouse_genomes_project 14 64169224 64267050 + MGP_129S1SvImJ_P0039992 Loxl2 protein_coding protein_coding MGP_129S1SvImJ_T0039993.1 MGP_129S1SvImJ_G0021522.1 mouse_genomes_project 14 64169633 64265115 + MGP_129S1SvImJ_P0039993 Loxl2 protein_coding protein_coding MGP_129S1SvImJ_T0000952.1 MGP_129S1SvImJ_G0000884.1 mouse_genomes_project 14 96072795 96121045 - TEC TEC MGP_129S1SvImJ_T0038747.1 MGP_129S1SvImJ_G0021120.1 mouse_genomes_project 14 24311397 24313251 - Stab1 protein_coding retained_intron MGP_129S1SvImJ_T0038748.1 MGP_129S1SvImJ_G0021120.1 mouse_genomes_project 14 24311397 24315217 - Stab1 protein_coding retained_intron MGP_129S1SvImJ_T0038749.1 MGP_129S1SvImJ_G0021120.1 mouse_genomes_project 14 24311397 24312233 - MGP_129S1SvImJ_P0038749 Stab1 protein_coding protein_coding MGP_129S1SvImJ_T0038750.1 MGP_129S1SvImJ_G0021120.1 mouse_genomes_project 14 24311397 24342463 - MGP_129S1SvImJ_P0038750 Stab1 protein_coding protein_coding MGP_129S1SvImJ_T0038751.1 MGP_129S1SvImJ_G0021120.1 mouse_genomes_project 14 24311401 24317838 - Stab1 protein_coding retained_intron MGP_129S1SvImJ_T0038752.1 MGP_129S1SvImJ_G0021120.1 mouse_genomes_project 14 24311401 24312559 - Stab1 protein_coding processed_transcript MGP_129S1SvImJ_T0038753.1 MGP_129S1SvImJ_G0021120.1 mouse_genomes_project 14 24311403 24316110 - Stab1 protein_coding retained_intron MGP_129S1SvImJ_T0038754.1 MGP_129S1SvImJ_G0021120.1 mouse_genomes_project 14 24312353 24313328 - Stab1 protein_coding retained_intron MGP_129S1SvImJ_T0038755.1 MGP_129S1SvImJ_G0021120.1 mouse_genomes_project 14 24314017 24315577 - MGP_129S1SvImJ_P0038755 Stab1 protein_coding protein_coding MGP_129S1SvImJ_T0038756.1 MGP_129S1SvImJ_G0021120.1 mouse_genomes_project 14 24314768 24315382 - Stab1 protein_coding retained_intron MGP_129S1SvImJ_T0038757.1 MGP_129S1SvImJ_G0021120.1 mouse_genomes_project 14 24329022 24329770 - Stab1 protein_coding retained_intron MGP_129S1SvImJ_T0038758.1 MGP_129S1SvImJ_G0021120.1 mouse_genomes_project 14 24329022 24334215 - Stab1 protein_coding retained_intron MGP_129S1SvImJ_T0038759.1 MGP_129S1SvImJ_G0021120.1 mouse_genomes_project 14 24330895 24342417 - Stab1 protein_coding retained_intron MGP_129S1SvImJ_T0040417.1 MGP_129S1SvImJ_G0021675.1 mouse_genomes_project 14 120732579 120831079 - MGP_129S1SvImJ_P0040417 Ggact protein_coding protein_coding MGP_129S1SvImJ_T0040420.1 MGP_129S1SvImJ_G0021675.1 mouse_genomes_project 14 120808042 120831121 - MGP_129S1SvImJ_P0040420 Ggact protein_coding protein_coding MGP_129S1SvImJ_T0040421.1 MGP_129S1SvImJ_G0021675.1 mouse_genomes_project 14 120808053 120808890 - MGP_129S1SvImJ_P0040421 Ggact protein_coding protein_coding MGP_129S1SvImJ_T0040422.1 MGP_129S1SvImJ_G0021675.1 mouse_genomes_project 14 120808619 120831716 - MGP_129S1SvImJ_P0040422 Ggact protein_coding protein_coding MGP_129S1SvImJ_T0040423.1 MGP_129S1SvImJ_G0021675.1 mouse_genomes_project 14 120808668 120831044 - MGP_129S1SvImJ_P0040423 Ggact protein_coding protein_coding MGP_129S1SvImJ_T0039558.1 MGP_129S1SvImJ_G0021353.1 mouse_genomes_project 14 49623955 49627602 - MGP_129S1SvImJ_P0039558 Psme2 protein_coding protein_coding MGP_129S1SvImJ_T0039559.1 MGP_129S1SvImJ_G0021353.1 mouse_genomes_project 14 49623956 49627616 - MGP_129S1SvImJ_P0039559 Psme2 protein_coding protein_coding MGP_129S1SvImJ_T0039560.1 MGP_129S1SvImJ_G0021353.1 mouse_genomes_project 14 49623961 49625119 - Psme2 protein_coding retained_intron MGP_129S1SvImJ_T0039561.1 MGP_129S1SvImJ_G0021353.1 mouse_genomes_project 14 49623961 49626026 - Psme2 protein_coding retained_intron MGP_129S1SvImJ_T0039562.1 MGP_129S1SvImJ_G0021353.1 mouse_genomes_project 14 49624568 49626664 - Psme2 protein_coding retained_intron MGP_129S1SvImJ_T0039563.1 MGP_129S1SvImJ_G0021353.1 mouse_genomes_project 14 49624586 49627628 - MGP_129S1SvImJ_P0039563 Psme2 protein_coding protein_coding MGP_129S1SvImJ_T0039564.1 MGP_129S1SvImJ_G0021353.1 mouse_genomes_project 14 49624597 49627379 - Psme2 protein_coding retained_intron MGP_129S1SvImJ_T0039565.1 MGP_129S1SvImJ_G0021353.1 mouse_genomes_project 14 49625708 49627488 - Psme2 protein_coding retained_intron MGP_129S1SvImJ_T0039566.1 MGP_129S1SvImJ_G0021353.1 mouse_genomes_project 14 49625831 49627463 - Psme2 protein_coding retained_intron MGP_129S1SvImJ_T0039567.1 MGP_129S1SvImJ_G0021353.1 mouse_genomes_project 14 49626512 49627410 - Psme2 protein_coding retained_intron MGP_129S1SvImJ_T0039351.1 MGP_129S1SvImJ_G0021300.1 mouse_genomes_project 14 46513626 46523464 + MGP_129S1SvImJ_P0039351 Olfr1509 protein_coding protein_coding MGP_129S1SvImJ_T0039352.1 MGP_129S1SvImJ_G0021300.1 mouse_genomes_project 14 46513627 46522853 + MGP_129S1SvImJ_P0039352 Olfr1509 protein_coding protein_coding MGP_129S1SvImJ_T0039353.1 MGP_129S1SvImJ_G0021300.1 mouse_genomes_project 14 46513662 46522687 + MGP_129S1SvImJ_P0039353 Olfr1509 protein_coding protein_coding MGP_129S1SvImJ_T0039354.1 MGP_129S1SvImJ_G0021300.1 mouse_genomes_project 14 46521409 46522946 + MGP_129S1SvImJ_P0039354 Olfr1509 protein_coding protein_coding MGP_129S1SvImJ_T0039355.1 MGP_129S1SvImJ_G0021300.1 mouse_genomes_project 14 46522454 46523464 + MGP_129S1SvImJ_P0039355 Olfr1509 protein_coding protein_coding MGP_129S1SvImJ_T0013035.1 MGP_129S1SvImJ_G0011124.1 mouse_genomes_project 14 54485012 54485360 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000935.1 MGP_129S1SvImJ_G0000867.1 mouse_genomes_project 14 46434216 46436560 - TEC TEC MGP_129S1SvImJ_T0039367.1 MGP_129S1SvImJ_G0021304.1 mouse_genomes_project 14 48188833 48205840 + MGP_129S1SvImJ_P0039367 Abhd4 protein_coding protein_coding MGP_129S1SvImJ_T0039368.1 MGP_129S1SvImJ_G0021304.1 mouse_genomes_project 14 48193914 48205934 + MGP_129S1SvImJ_P0039368 Abhd4 protein_coding protein_coding MGP_129S1SvImJ_T0039369.1 MGP_129S1SvImJ_G0021304.1 mouse_genomes_project 14 48193929 48197817 + Abhd4 protein_coding retained_intron MGP_129S1SvImJ_T0039370.1 MGP_129S1SvImJ_G0021304.1 mouse_genomes_project 14 48193935 48197976 + MGP_129S1SvImJ_P0039370 Abhd4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039371.1 MGP_129S1SvImJ_G0021304.1 mouse_genomes_project 14 48193963 48197979 + MGP_129S1SvImJ_P0039371 Abhd4 protein_coding protein_coding MGP_129S1SvImJ_T0039372.1 MGP_129S1SvImJ_G0021304.1 mouse_genomes_project 14 48197631 48207177 + MGP_129S1SvImJ_P0039372 Abhd4 protein_coding protein_coding MGP_129S1SvImJ_T0039373.1 MGP_129S1SvImJ_G0021304.1 mouse_genomes_project 14 48197936 48204619 + MGP_129S1SvImJ_P0039373 Abhd4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038571.1 MGP_129S1SvImJ_G0021073.1 mouse_genomes_project 14 18869974 18873411 - MGP_129S1SvImJ_P0038571 protein_coding protein_coding MGP_129S1SvImJ_T0038572.1 MGP_129S1SvImJ_G0021073.1 mouse_genomes_project 14 18869978 18873017 - MGP_129S1SvImJ_P0038572 protein_coding protein_coding MGP_129S1SvImJ_T0038576.1 MGP_129S1SvImJ_G0021074.1 mouse_genomes_project 14 18886653 18903206 + protein_coding processed_transcript MGP_129S1SvImJ_T0038580.1 MGP_129S1SvImJ_G0021074.1 mouse_genomes_project 14 18890832 18904612 + MGP_129S1SvImJ_P0038580 protein_coding protein_coding MGP_129S1SvImJ_T0038582.1 MGP_129S1SvImJ_G0021074.1 mouse_genomes_project 14 18900079 18903487 + protein_coding retained_intron MGP_129S1SvImJ_T0038583.1 MGP_129S1SvImJ_G0021074.1 mouse_genomes_project 14 18902923 18903403 + protein_coding retained_intron MGP_129S1SvImJ_T0038760.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24344751 24381791 - MGP_129S1SvImJ_P0038760 Nisch protein_coding protein_coding MGP_129S1SvImJ_T0038761.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24344751 24365299 - MGP_129S1SvImJ_P0038761 Nisch protein_coding protein_coding MGP_129S1SvImJ_T0038762.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24345079 24360977 - MGP_129S1SvImJ_P0038762 Nisch protein_coding protein_coding MGP_129S1SvImJ_T0038763.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24345187 24348104 - MGP_129S1SvImJ_P0038763 Nisch protein_coding protein_coding MGP_129S1SvImJ_T0038764.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24345835 24347550 - MGP_129S1SvImJ_P0038764 Nisch protein_coding protein_coding MGP_129S1SvImJ_T0038765.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24348248 24350413 - MGP_129S1SvImJ_P0038765 Nisch protein_coding protein_coding MGP_129S1SvImJ_T0038766.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24350720 24377161 - MGP_129S1SvImJ_P0038766 Nisch protein_coding protein_coding MGP_129S1SvImJ_T0038767.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24351030 24355232 - MGP_129S1SvImJ_P0038767 Nisch protein_coding protein_coding MGP_129S1SvImJ_T0038768.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24351216 24359080 - MGP_129S1SvImJ_P0038768 Nisch protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038769.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24351325 24366389 - Nisch protein_coding processed_transcript MGP_129S1SvImJ_T0038770.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24351523 24359400 - Nisch protein_coding processed_transcript MGP_129S1SvImJ_T0038771.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24354611 24356591 - Nisch protein_coding processed_transcript MGP_129S1SvImJ_T0038772.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24357074 24381816 - MGP_129S1SvImJ_P0038772 Nisch protein_coding protein_coding MGP_129S1SvImJ_T0038773.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24357274 24358707 - Nisch protein_coding processed_transcript MGP_129S1SvImJ_T0038774.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24358768 24365266 - MGP_129S1SvImJ_P0038774 Nisch protein_coding protein_coding MGP_129S1SvImJ_T0038775.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24359447 24381690 - MGP_129S1SvImJ_P0038775 Nisch protein_coding protein_coding MGP_129S1SvImJ_T0038776.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24359483 24381690 - MGP_129S1SvImJ_P0038776 Nisch protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038777.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24360133 24361222 - Nisch protein_coding processed_transcript MGP_129S1SvImJ_T0038778.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24360882 24377082 - MGP_129S1SvImJ_P0038778 Nisch protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038779.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24362108 24364858 - Nisch protein_coding retained_intron MGP_129S1SvImJ_T0038780.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24374714 24381690 - Nisch protein_coding processed_transcript MGP_129S1SvImJ_T0038781.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24375635 24381691 - MGP_129S1SvImJ_P0038781 Nisch protein_coding protein_coding MGP_129S1SvImJ_T0038782.1 MGP_129S1SvImJ_G0021121.1 mouse_genomes_project 14 24377076 24391929 - Nisch protein_coding processed_transcript MGP_129S1SvImJ_T0100667.1 MGP_129S1SvImJ_G0038734.1 mouse_genomes_project 14 24180877 24180957 - Snord69 snoRNA snoRNA MGP_129S1SvImJ_T0006692.1 MGP_129S1SvImJ_G0005536.1 mouse_genomes_project 14 39308795 39310670 - A530076I17Rik lincRNA lincRNA MGP_129S1SvImJ_T0038982.1 MGP_129S1SvImJ_G0021188.1 mouse_genomes_project 14 30603025 30616151 - 2610528A11Rik protein_coding processed_transcript MGP_129S1SvImJ_T0038983.1 MGP_129S1SvImJ_G0021188.1 mouse_genomes_project 14 30603027 30610783 - MGP_129S1SvImJ_P0038983 2610528A11Rik protein_coding protein_coding MGP_129S1SvImJ_T0101628.1 MGP_129S1SvImJ_G0039667.1 mouse_genomes_project 14 42025333 42056297 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101629.1 MGP_129S1SvImJ_G0039667.1 mouse_genomes_project 14 42053768 42056090 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0040071.1 MGP_129S1SvImJ_G0021551.1 mouse_genomes_project 14 65561564 65657848 + MGP_129S1SvImJ_P0040071 Gfra2 protein_coding protein_coding MGP_129S1SvImJ_T0039982.1 MGP_129S1SvImJ_G0021518.1 mouse_genomes_project 14 64063108 64069300 - MGP_129S1SvImJ_P0039982 protein_coding protein_coding MGP_129S1SvImJ_T0040317.1 MGP_129S1SvImJ_G0021633.1 mouse_genomes_project 14 100342865 100372062 - MGP_129S1SvImJ_P0040317 Ednrb protein_coding protein_coding MGP_129S1SvImJ_T0040318.1 MGP_129S1SvImJ_G0021633.1 mouse_genomes_project 14 100342866 100371585 - MGP_129S1SvImJ_P0040318 Ednrb protein_coding protein_coding MGP_129S1SvImJ_T0006740.1 MGP_129S1SvImJ_G0005571.1 mouse_genomes_project 14 99463417 99467734 + Gm26778 lincRNA lincRNA MGP_129S1SvImJ_T0006720.1 MGP_129S1SvImJ_G0005557.1 mouse_genomes_project 14 56046853 56065204 + Gm27017 lincRNA lincRNA MGP_129S1SvImJ_T0038344.1 MGP_129S1SvImJ_G0021011.1 mouse_genomes_project 14 7246051 7354076 + MGP_129S1SvImJ_P0038344 Slc4a7 protein_coding protein_coding MGP_129S1SvImJ_T0039718.1 MGP_129S1SvImJ_G0021413.1 mouse_genomes_project 14 52045643 52048150 + MGP_129S1SvImJ_P0039718 Mrpl57 protein_coding protein_coding MGP_129S1SvImJ_T0012994.1 MGP_129S1SvImJ_G0011083.1 mouse_genomes_project 14 15427998 15428370 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039077.1 MGP_129S1SvImJ_G0021221.1 mouse_genomes_project 14 41114506 41127890 + MGP_129S1SvImJ_P0039077 Lgals3 protein_coding protein_coding MGP_129S1SvImJ_T0039078.1 MGP_129S1SvImJ_G0021221.1 mouse_genomes_project 14 41121614 41133610 + MGP_129S1SvImJ_P0039078 Lgals3 protein_coding protein_coding MGP_129S1SvImJ_T0039079.1 MGP_129S1SvImJ_G0021221.1 mouse_genomes_project 14 41121700 41133246 + MGP_129S1SvImJ_P0039079 Lgals3 protein_coding protein_coding MGP_129S1SvImJ_T0039080.1 MGP_129S1SvImJ_G0021221.1 mouse_genomes_project 14 41121717 41127789 + MGP_129S1SvImJ_P0039080 Lgals3 protein_coding protein_coding MGP_129S1SvImJ_T0039081.1 MGP_129S1SvImJ_G0021221.1 mouse_genomes_project 14 41121775 41133241 + MGP_129S1SvImJ_P0039081 Lgals3 protein_coding protein_coding MGP_129S1SvImJ_T0039848.1 MGP_129S1SvImJ_G0021465.1 mouse_genomes_project 14 58409270 58468775 + MGP_129S1SvImJ_P0039848 Pinx1 protein_coding protein_coding MGP_129S1SvImJ_T0039050.1 MGP_129S1SvImJ_G0021213.1 mouse_genomes_project 14 40446226 40458057 + MGP_129S1SvImJ_P0039050 Cdkn3 protein_coding protein_coding MGP_129S1SvImJ_T0039051.1 MGP_129S1SvImJ_G0021213.1 mouse_genomes_project 14 40446325 40458019 + MGP_129S1SvImJ_P0039051 Cdkn3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0100666.1 MGP_129S1SvImJ_G0038733.1 mouse_genomes_project 14 20542436 20542534 - Gm25697 snoRNA snoRNA MGP_129S1SvImJ_T0000939.1 MGP_129S1SvImJ_G0000871.1 mouse_genomes_project 14 56065111 56068022 - TEC TEC MGP_129S1SvImJ_T0100697.1 MGP_129S1SvImJ_G0038764.1 mouse_genomes_project 14 85357533 85357665 + Gm25415 snoRNA snoRNA MGP_129S1SvImJ_T0002670.1 MGP_129S1SvImJ_G0002557.1 mouse_genomes_project 14 47415720 47416193 + MGP_129S1SvImJ_P0002670 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0003576.1 MGP_129S1SvImJ_G0003249.1 mouse_genomes_project 14 49054785 49073299 + Gm20687 antisense antisense MGP_129S1SvImJ_T0039878.1 MGP_129S1SvImJ_G0021479.1 mouse_genomes_project 14 59958005 60000793 + MGP_129S1SvImJ_P0039878 Zfp395 protein_coding protein_coding MGP_129S1SvImJ_T0098704.1 MGP_129S1SvImJ_G0036789.1 mouse_genomes_project 14 44758279 44758577 - Rpph1 ribozyme ribozyme MGP_129S1SvImJ_T0040008.1 MGP_129S1SvImJ_G0021531.1 mouse_genomes_project 14 64775600 64782449 - MGP_129S1SvImJ_P0040008 9930012K11Rik protein_coding protein_coding MGP_129S1SvImJ_T0040009.1 MGP_129S1SvImJ_G0021531.1 mouse_genomes_project 14 64775600 64782449 - MGP_129S1SvImJ_P0040009 9930012K11Rik protein_coding protein_coding MGP_129S1SvImJ_T0040010.1 MGP_129S1SvImJ_G0021531.1 mouse_genomes_project 14 64775603 64779851 - 9930012K11Rik protein_coding retained_intron MGP_129S1SvImJ_T0040011.1 MGP_129S1SvImJ_G0021531.1 mouse_genomes_project 14 64776093 64779400 - MGP_129S1SvImJ_P0040011 9930012K11Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040012.1 MGP_129S1SvImJ_G0021531.1 mouse_genomes_project 14 64776226 64779743 - 9930012K11Rik protein_coding retained_intron MGP_129S1SvImJ_T0040013.1 MGP_129S1SvImJ_G0021531.1 mouse_genomes_project 14 64776363 64782327 - MGP_129S1SvImJ_P0040013 9930012K11Rik protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040213.1 MGP_129S1SvImJ_G0021597.1 mouse_genomes_project 14 74550959 74555741 + MGP_129S1SvImJ_P0040213 Kbtbd7 protein_coding protein_coding MGP_129S1SvImJ_T0040399.1 MGP_129S1SvImJ_G0021669.1 mouse_genomes_project 14 120074541 120312492 + MGP_129S1SvImJ_P0040399 Clybl protein_coding protein_coding MGP_129S1SvImJ_T0039960.1 MGP_129S1SvImJ_G0021505.1 mouse_genomes_project 14 62460978 62484699 + MGP_129S1SvImJ_P0039960 Kctd9 protein_coding protein_coding MGP_129S1SvImJ_T0039961.1 MGP_129S1SvImJ_G0021505.1 mouse_genomes_project 14 62461139 62487353 + MGP_129S1SvImJ_P0039961 Kctd9 protein_coding protein_coding MGP_129S1SvImJ_T0039962.1 MGP_129S1SvImJ_G0021505.1 mouse_genomes_project 14 62461181 62474737 + MGP_129S1SvImJ_P0039962 Kctd9 protein_coding protein_coding MGP_129S1SvImJ_T0039963.1 MGP_129S1SvImJ_G0021505.1 mouse_genomes_project 14 62461326 62487204 + MGP_129S1SvImJ_P0039963 Kctd9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039964.1 MGP_129S1SvImJ_G0021505.1 mouse_genomes_project 14 62461378 62485454 + MGP_129S1SvImJ_P0039964 Kctd9 protein_coding protein_coding MGP_129S1SvImJ_T0003591.1 MGP_129S1SvImJ_G0003260.1 mouse_genomes_project 14 58675668 58679116 - Gm17116 antisense antisense MGP_129S1SvImJ_T0039164.1 MGP_129S1SvImJ_G0021241.1 mouse_genomes_project 14 44178192 44179236 - MGP_129S1SvImJ_P0039164 Olfr732 protein_coding protein_coding MGP_129S1SvImJ_T0039573.1 MGP_129S1SvImJ_G0021355.1 mouse_genomes_project 14 49640091 49648805 + MGP_129S1SvImJ_P0039573 Irf9 protein_coding protein_coding MGP_129S1SvImJ_T0039574.1 MGP_129S1SvImJ_G0021355.1 mouse_genomes_project 14 49640505 49648805 + MGP_129S1SvImJ_P0039574 Irf9 protein_coding protein_coding MGP_129S1SvImJ_T0039575.1 MGP_129S1SvImJ_G0021355.1 mouse_genomes_project 14 49641097 49644635 + Irf9 protein_coding retained_intron MGP_129S1SvImJ_T0039576.1 MGP_129S1SvImJ_G0021355.1 mouse_genomes_project 14 49641099 49648805 + MGP_129S1SvImJ_P0039576 Irf9 protein_coding protein_coding MGP_129S1SvImJ_T0039577.1 MGP_129S1SvImJ_G0021355.1 mouse_genomes_project 14 49644594 49648802 + Irf9 protein_coding retained_intron MGP_129S1SvImJ_T0039578.1 MGP_129S1SvImJ_G0021355.1 mouse_genomes_project 14 49646049 49647508 + Irf9 protein_coding retained_intron MGP_129S1SvImJ_T0100680.1 MGP_129S1SvImJ_G0038747.1 mouse_genomes_project 14 50311923 50312049 + Gm24118 snoRNA snoRNA MGP_129S1SvImJ_T0038277.1 MGP_129S1SvImJ_G0020985.1 mouse_genomes_project 14 293229 323244 - MGP_129S1SvImJ_P0038277 Dnase1l3 protein_coding protein_coding MGP_129S1SvImJ_T0038278.1 MGP_129S1SvImJ_G0020985.1 mouse_genomes_project 14 304693 306035 - Dnase1l3 protein_coding processed_transcript MGP_129S1SvImJ_T0006726.1 MGP_129S1SvImJ_G0005562.1 mouse_genomes_project 14 59149828 59150612 + Mir124a-1hg lincRNA lincRNA MGP_129S1SvImJ_T0006727.1 MGP_129S1SvImJ_G0005562.1 mouse_genomes_project 14 59150550 59156473 + Mir124a-1hg lincRNA lincRNA MGP_129S1SvImJ_T0006728.1 MGP_129S1SvImJ_G0005562.1 mouse_genomes_project 14 59151012 59152972 + Mir124a-1hg lincRNA lincRNA MGP_129S1SvImJ_T0006729.1 MGP_129S1SvImJ_G0005562.1 mouse_genomes_project 14 59152190 59153187 + Mir124a-1hg lincRNA lincRNA MGP_129S1SvImJ_T0038300.1 MGP_129S1SvImJ_G0020993.1 mouse_genomes_project 14 687224 719780 - MGP_129S1SvImJ_P0038300 Oit1 protein_coding protein_coding MGP_129S1SvImJ_T0006743.1 MGP_129S1SvImJ_G0005573.1 mouse_genomes_project 14 112497185 112501034 + Mir17hg lincRNA lincRNA MGP_129S1SvImJ_T0100664.1 MGP_129S1SvImJ_G0038731.1 mouse_genomes_project 14 12946547 12946664 - Gm24912 snoRNA snoRNA MGP_129S1SvImJ_T0099398.1 MGP_129S1SvImJ_G0037465.1 mouse_genomes_project 14 43723611 43723697 + Gm22989 snRNA snRNA MGP_129S1SvImJ_T0040382.1 MGP_129S1SvImJ_G0021660.1 mouse_genomes_project 14 118792645 119014530 + MGP_129S1SvImJ_P0040382 Farp1 protein_coding protein_coding MGP_129S1SvImJ_T0040383.1 MGP_129S1SvImJ_G0021660.1 mouse_genomes_project 14 118793009 119067617 + MGP_129S1SvImJ_P0040383 Farp1 protein_coding protein_coding MGP_129S1SvImJ_T0040384.1 MGP_129S1SvImJ_G0021660.1 mouse_genomes_project 14 118863650 119019473 + Farp1 protein_coding processed_transcript MGP_129S1SvImJ_T0040385.1 MGP_129S1SvImJ_G0021660.1 mouse_genomes_project 14 119038714 119051767 + Farp1 protein_coding retained_intron MGP_129S1SvImJ_T0040396.1 MGP_129S1SvImJ_G0021668.1 mouse_genomes_project 14 119991935 120052585 + MGP_129S1SvImJ_P0040396 Tm9sf2 protein_coding protein_coding MGP_129S1SvImJ_T0040397.1 MGP_129S1SvImJ_G0021668.1 mouse_genomes_project 14 119992035 120027212 + MGP_129S1SvImJ_P0040397 Tm9sf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040398.1 MGP_129S1SvImJ_G0021668.1 mouse_genomes_project 14 119992165 120050182 + MGP_129S1SvImJ_P0040398 Tm9sf2 protein_coding protein_coding MGP_129S1SvImJ_T0038383.1 MGP_129S1SvImJ_G0021022.1 mouse_genomes_project 14 11193736 11517430 - MGP_129S1SvImJ_P0038383 Ube2e2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038384.1 MGP_129S1SvImJ_G0021022.1 mouse_genomes_project 14 11193738 11523303 - MGP_129S1SvImJ_P0038384 Ube2e2 protein_coding protein_coding MGP_129S1SvImJ_T0038385.1 MGP_129S1SvImJ_G0021022.1 mouse_genomes_project 14 11194203 11517278 - MGP_129S1SvImJ_P0038385 Ube2e2 protein_coding protein_coding MGP_129S1SvImJ_T0038386.1 MGP_129S1SvImJ_G0021022.1 mouse_genomes_project 14 11194456 11517422 - MGP_129S1SvImJ_P0038386 Ube2e2 protein_coding protein_coding MGP_129S1SvImJ_T0038387.1 MGP_129S1SvImJ_G0021022.1 mouse_genomes_project 14 11194525 11223029 - Ube2e2 protein_coding processed_transcript MGP_129S1SvImJ_T0038388.1 MGP_129S1SvImJ_G0021022.1 mouse_genomes_project 14 11194525 11517374 - MGP_129S1SvImJ_P0038388 Ube2e2 protein_coding protein_coding MGP_129S1SvImJ_T0038389.1 MGP_129S1SvImJ_G0021022.1 mouse_genomes_project 14 11212073 11293814 - Ube2e2 protein_coding processed_transcript MGP_129S1SvImJ_T0038390.1 MGP_129S1SvImJ_G0021022.1 mouse_genomes_project 14 11212073 11522391 - MGP_129S1SvImJ_P0038390 Ube2e2 protein_coding protein_coding MGP_129S1SvImJ_T0038391.1 MGP_129S1SvImJ_G0021022.1 mouse_genomes_project 14 11255766 11523810 - MGP_129S1SvImJ_P0038391 Ube2e2 protein_coding protein_coding MGP_129S1SvImJ_T0038392.1 MGP_129S1SvImJ_G0021022.1 mouse_genomes_project 14 11515339 11522256 - Ube2e2 protein_coding retained_intron MGP_129S1SvImJ_T0099388.1 MGP_129S1SvImJ_G0037455.1 mouse_genomes_project 14 20503999 20504108 + Gm22485 snRNA snRNA MGP_129S1SvImJ_T0099419.1 MGP_129S1SvImJ_G0037486.1 mouse_genomes_project 14 95642971 95643093 - Gm22984 snRNA snRNA MGP_129S1SvImJ_T0040313.1 MGP_129S1SvImJ_G0021632.1 mouse_genomes_project 14 100170168 100226184 + MGP_129S1SvImJ_P0040313 Slain1 protein_coding protein_coding MGP_129S1SvImJ_T0040314.1 MGP_129S1SvImJ_G0021632.1 mouse_genomes_project 14 100170586 100225587 + MGP_129S1SvImJ_P0040314 Slain1 protein_coding protein_coding MGP_129S1SvImJ_T0040315.1 MGP_129S1SvImJ_G0021632.1 mouse_genomes_project 14 100175711 100208802 + MGP_129S1SvImJ_P0040315 Slain1 protein_coding protein_coding MGP_129S1SvImJ_T0040316.1 MGP_129S1SvImJ_G0021632.1 mouse_genomes_project 14 100184436 100226079 + MGP_129S1SvImJ_P0040316 Slain1 protein_coding protein_coding MGP_129S1SvImJ_T0003562.1 MGP_129S1SvImJ_G0003237.1 mouse_genomes_project 14 32469666 32534933 + Nrg3os antisense antisense MGP_129S1SvImJ_T0040212.1 MGP_129S1SvImJ_G0021596.1 mouse_genomes_project 14 74524028 74548047 + MGP_129S1SvImJ_P0040212 Mtrf1 protein_coding protein_coding MGP_129S1SvImJ_T0039228.1 MGP_129S1SvImJ_G0021280.1 mouse_genomes_project 14 45863087 45863955 + MGP_129S1SvImJ_P0039228 Ear6 protein_coding protein_coding MGP_129S1SvImJ_T0039229.1 MGP_129S1SvImJ_G0021280.1 mouse_genomes_project 14 45863156 45863955 + MGP_129S1SvImJ_P0039229 Ear6 protein_coding protein_coding MGP_129S1SvImJ_T0038639.1 MGP_129S1SvImJ_G0021093.1 mouse_genomes_project 14 20497154 20523191 - MGP_129S1SvImJ_P0038639 Ccdc66 protein_coding protein_coding MGP_129S1SvImJ_T0038798.1 MGP_129S1SvImJ_G0021127.1 mouse_genomes_project 14 24516021 24552008 + MGP_129S1SvImJ_P0038798 Capn7 protein_coding protein_coding MGP_129S1SvImJ_T0038799.1 MGP_129S1SvImJ_G0021127.1 mouse_genomes_project 14 24516058 24552010 + MGP_129S1SvImJ_P0038799 Capn7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038800.1 MGP_129S1SvImJ_G0021127.1 mouse_genomes_project 14 24516090 24552008 + MGP_129S1SvImJ_P0038800 Capn7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0003602.1 MGP_129S1SvImJ_G0003267.1 mouse_genomes_project 14 67324681 67339323 + Gm16549 antisense antisense MGP_129S1SvImJ_T0013017.1 MGP_129S1SvImJ_G0011106.1 mouse_genomes_project 14 46426467 46427231 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038926.1 MGP_129S1SvImJ_G0021164.1 mouse_genomes_project 14 27385272 27437609 - MGP_129S1SvImJ_P0038926 A630023A22Rik protein_coding protein_coding MGP_129S1SvImJ_T0039692.1 MGP_129S1SvImJ_G0021408.1 mouse_genomes_project 14 51744879 51772573 - MGP_129S1SvImJ_P0039692 Eef1akmt1 protein_coding protein_coding MGP_129S1SvImJ_T0002676.1 MGP_129S1SvImJ_G0002562.1 mouse_genomes_project 14 47569255 47569846 + MGP_129S1SvImJ_P0002676 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0040197.1 MGP_129S1SvImJ_G0021589.1 mouse_genomes_project 14 73325282 73359953 - MGP_129S1SvImJ_P0040197 Tnfsf11 protein_coding protein_coding MGP_129S1SvImJ_T0040110.1 MGP_129S1SvImJ_G0021557.1 mouse_genomes_project 14 68108121 68132064 - MGP_129S1SvImJ_P0040110 Itm2b protein_coding protein_coding MGP_129S1SvImJ_T0039033.1 MGP_129S1SvImJ_G0021210.1 mouse_genomes_project 14 39231476 39299403 - MGP_129S1SvImJ_P0039033 Ddhd1 protein_coding protein_coding MGP_129S1SvImJ_T0039034.1 MGP_129S1SvImJ_G0021210.1 mouse_genomes_project 14 39231787 39260585 - Ddhd1 protein_coding retained_intron MGP_129S1SvImJ_T0039035.1 MGP_129S1SvImJ_G0021210.1 mouse_genomes_project 14 39232957 39299358 - MGP_129S1SvImJ_P0039035 Ddhd1 protein_coding protein_coding MGP_129S1SvImJ_T0039036.1 MGP_129S1SvImJ_G0021210.1 mouse_genomes_project 14 39232957 39299358 - MGP_129S1SvImJ_P0039036 Ddhd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039037.1 MGP_129S1SvImJ_G0021210.1 mouse_genomes_project 14 39233028 39262503 - Ddhd1 protein_coding retained_intron MGP_129S1SvImJ_T0039038.1 MGP_129S1SvImJ_G0021210.1 mouse_genomes_project 14 39233245 39241057 - MGP_129S1SvImJ_P0039038 Ddhd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039039.1 MGP_129S1SvImJ_G0021210.1 mouse_genomes_project 14 39233638 39260042 - MGP_129S1SvImJ_P0039039 Ddhd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039040.1 MGP_129S1SvImJ_G0021210.1 mouse_genomes_project 14 39233728 39299402 - MGP_129S1SvImJ_P0039040 Ddhd1 protein_coding protein_coding MGP_129S1SvImJ_T0039041.1 MGP_129S1SvImJ_G0021210.1 mouse_genomes_project 14 39243340 39247695 - Ddhd1 protein_coding retained_intron MGP_129S1SvImJ_T0039042.1 MGP_129S1SvImJ_G0021210.1 mouse_genomes_project 14 39259967 39298661 - Ddhd1 protein_coding processed_transcript MGP_129S1SvImJ_T0039043.1 MGP_129S1SvImJ_G0021210.1 mouse_genomes_project 14 39267662 39298678 - Ddhd1 protein_coding retained_intron MGP_129S1SvImJ_T0038514.1 MGP_129S1SvImJ_G0021060.1 mouse_genomes_project 14 16184915 16702029 - MGP_129S1SvImJ_P0038514 Kcnma1 protein_coding protein_coding MGP_129S1SvImJ_T0038515.1 MGP_129S1SvImJ_G0021060.1 mouse_genomes_project 14 16184915 16702029 - MGP_129S1SvImJ_P0038515 Kcnma1 protein_coding protein_coding MGP_129S1SvImJ_T0038516.1 MGP_129S1SvImJ_G0021060.1 mouse_genomes_project 14 16194178 16702029 - MGP_129S1SvImJ_P0038516 Kcnma1 protein_coding protein_coding MGP_129S1SvImJ_T0038517.1 MGP_129S1SvImJ_G0021060.1 mouse_genomes_project 14 16194178 16702029 - MGP_129S1SvImJ_P0038517 Kcnma1 protein_coding protein_coding MGP_129S1SvImJ_T0038518.1 MGP_129S1SvImJ_G0021060.1 mouse_genomes_project 14 16194178 16702029 - MGP_129S1SvImJ_P0038518 Kcnma1 protein_coding protein_coding MGP_129S1SvImJ_T0038519.1 MGP_129S1SvImJ_G0021060.1 mouse_genomes_project 14 16194865 16913091 - MGP_129S1SvImJ_P0038519 Kcnma1 protein_coding protein_coding MGP_129S1SvImJ_T0038520.1 MGP_129S1SvImJ_G0021060.1 mouse_genomes_project 14 16194879 16913745 - MGP_129S1SvImJ_P0038520 Kcnma1 protein_coding protein_coding MGP_129S1SvImJ_T0038521.1 MGP_129S1SvImJ_G0021060.1 mouse_genomes_project 14 16194879 16544641 - MGP_129S1SvImJ_P0038521 Kcnma1 protein_coding protein_coding MGP_129S1SvImJ_T0038522.1 MGP_129S1SvImJ_G0021060.1 mouse_genomes_project 14 16194879 16702029 - MGP_129S1SvImJ_P0038522 Kcnma1 protein_coding protein_coding MGP_129S1SvImJ_T0038523.1 MGP_129S1SvImJ_G0021060.1 mouse_genomes_project 14 16195375 16913091 - MGP_129S1SvImJ_P0038523 Kcnma1 protein_coding protein_coding MGP_129S1SvImJ_T0038524.1 MGP_129S1SvImJ_G0021060.1 mouse_genomes_project 14 16195375 16912863 - MGP_129S1SvImJ_P0038524 Kcnma1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038525.1 MGP_129S1SvImJ_G0021060.1 mouse_genomes_project 14 16195505 16913011 - MGP_129S1SvImJ_P0038525 Kcnma1 protein_coding protein_coding MGP_129S1SvImJ_T0038526.1 MGP_129S1SvImJ_G0021060.1 mouse_genomes_project 14 16204520 16702029 - MGP_129S1SvImJ_P0038526 Kcnma1 protein_coding protein_coding MGP_129S1SvImJ_T0038527.1 MGP_129S1SvImJ_G0021060.1 mouse_genomes_project 14 16204520 16702029 - MGP_129S1SvImJ_P0038527 Kcnma1 protein_coding protein_coding MGP_129S1SvImJ_T0038528.1 MGP_129S1SvImJ_G0021060.1 mouse_genomes_project 14 16911541 16913184 - MGP_129S1SvImJ_P0038528 Kcnma1 protein_coding protein_coding MGP_129S1SvImJ_T0006735.1 MGP_129S1SvImJ_G0005567.1 mouse_genomes_project 14 69945323 69945966 - Gm15628 lincRNA lincRNA MGP_129S1SvImJ_T0010038.1 MGP_129S1SvImJ_G0008154.1 mouse_genomes_project 14 112498463 112498570 + Mir20a miRNA miRNA MGP_129S1SvImJ_T0039627.1 MGP_129S1SvImJ_G0021367.1 mouse_genomes_project 14 49788152 49797957 + MGP_129S1SvImJ_P0039627 Nop9 protein_coding protein_coding MGP_129S1SvImJ_T0012998.1 MGP_129S1SvImJ_G0011087.1 mouse_genomes_project 14 18887708 18888930 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010035.1 MGP_129S1SvImJ_G0008151.1 mouse_genomes_project 14 112497977 112498061 + Mir17 miRNA miRNA MGP_129S1SvImJ_T0011396.1 MGP_129S1SvImJ_G0009512.1 mouse_genomes_project 14 56039576 56039661 + Gm27747 misc_RNA misc_RNA MGP_129S1SvImJ_T0013010.1 MGP_129S1SvImJ_G0011099.1 mouse_genomes_project 14 39359105 39359298 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038396.1 MGP_129S1SvImJ_G0021026.1 mouse_genomes_project 14 12590858 12710820 - MGP_129S1SvImJ_P0038396 Gng2 protein_coding protein_coding MGP_129S1SvImJ_T0038397.1 MGP_129S1SvImJ_G0021026.1 mouse_genomes_project 14 12593966 12710743 - MGP_129S1SvImJ_P0038397 Gng2 protein_coding protein_coding MGP_129S1SvImJ_T0038398.1 MGP_129S1SvImJ_G0021026.1 mouse_genomes_project 14 12593966 12711198 - MGP_129S1SvImJ_P0038398 Gng2 protein_coding protein_coding MGP_129S1SvImJ_T0038399.1 MGP_129S1SvImJ_G0021026.1 mouse_genomes_project 14 12594007 12710630 - MGP_129S1SvImJ_P0038399 Gng2 protein_coding protein_coding MGP_129S1SvImJ_T0038400.1 MGP_129S1SvImJ_G0021026.1 mouse_genomes_project 14 12594050 12710755 - MGP_129S1SvImJ_P0038400 Gng2 protein_coding protein_coding MGP_129S1SvImJ_T0038401.1 MGP_129S1SvImJ_G0021026.1 mouse_genomes_project 14 12594104 12710264 - MGP_129S1SvImJ_P0038401 Gng2 protein_coding protein_coding MGP_129S1SvImJ_T0099427.1 MGP_129S1SvImJ_G0037494.1 mouse_genomes_project 14 107326324 107326431 - Gm23242 snRNA snRNA MGP_129S1SvImJ_T0002650.1 MGP_129S1SvImJ_G0002542.1 mouse_genomes_project 14 47026062 47026664 + MGP_129S1SvImJ_P0002650 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0100688.1 MGP_129S1SvImJ_G0038755.1 mouse_genomes_project 14 61679369 61679502 + Gm24258 snoRNA snoRNA MGP_129S1SvImJ_T0002637.1 MGP_129S1SvImJ_G0002529.1 mouse_genomes_project 14 46809482 46810122 + MGP_129S1SvImJ_P0002637 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0038723.1 MGP_129S1SvImJ_G0021116.1 mouse_genomes_project 14 24177371 24185680 - MGP_129S1SvImJ_P0038723 Gnl3 protein_coding protein_coding MGP_129S1SvImJ_T0002682.1 MGP_129S1SvImJ_G0002567.1 mouse_genomes_project 14 47751403 47752129 + MGP_129S1SvImJ_P0002682 Trav18 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002683.1 MGP_129S1SvImJ_G0002567.1 mouse_genomes_project 14 47751403 47752129 + MGP_129S1SvImJ_P0002683 Trav18 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0038357.1 MGP_129S1SvImJ_G0021015.1 mouse_genomes_project 14 8872745 8937338 + MGP_129S1SvImJ_P0038357 Ngly1 protein_coding protein_coding MGP_129S1SvImJ_T0038358.1 MGP_129S1SvImJ_G0021015.1 mouse_genomes_project 14 8872792 8907801 + Ngly1 protein_coding retained_intron MGP_129S1SvImJ_T0038359.1 MGP_129S1SvImJ_G0021015.1 mouse_genomes_project 14 8905477 8907924 + Ngly1 protein_coding retained_intron MGP_129S1SvImJ_T0040273.1 MGP_129S1SvImJ_G0021622.1 mouse_genomes_project 14 98061353 98068275 - MGP_129S1SvImJ_P0040273 Commd6 protein_coding protein_coding MGP_129S1SvImJ_T0040274.1 MGP_129S1SvImJ_G0021622.1 mouse_genomes_project 14 98061354 98068060 - MGP_129S1SvImJ_P0040274 Commd6 protein_coding protein_coding MGP_129S1SvImJ_T0040275.1 MGP_129S1SvImJ_G0021622.1 mouse_genomes_project 14 98067644 98068275 - Commd6 protein_coding retained_intron MGP_129S1SvImJ_T0038372.1 MGP_129S1SvImJ_G0021020.1 mouse_genomes_project 14 10881411 10895322 + MGP_129S1SvImJ_P0038372 Nkiras1 protein_coding protein_coding MGP_129S1SvImJ_T0038373.1 MGP_129S1SvImJ_G0021020.1 mouse_genomes_project 14 10881461 10890715 + MGP_129S1SvImJ_P0038373 Nkiras1 protein_coding protein_coding MGP_129S1SvImJ_T0038374.1 MGP_129S1SvImJ_G0021020.1 mouse_genomes_project 14 10881479 10887994 + Nkiras1 protein_coding retained_intron MGP_129S1SvImJ_T0038375.1 MGP_129S1SvImJ_G0021020.1 mouse_genomes_project 14 10881486 10889077 + Nkiras1 protein_coding processed_transcript MGP_129S1SvImJ_T0038376.1 MGP_129S1SvImJ_G0021020.1 mouse_genomes_project 14 10881502 10891110 + MGP_129S1SvImJ_P0038376 Nkiras1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038377.1 MGP_129S1SvImJ_G0021020.1 mouse_genomes_project 14 10881513 10887749 + Nkiras1 protein_coding retained_intron MGP_129S1SvImJ_T0038378.1 MGP_129S1SvImJ_G0021020.1 mouse_genomes_project 14 10881539 10889218 + Nkiras1 protein_coding processed_transcript MGP_129S1SvImJ_T0102234.1 MGP_129S1SvImJ_G0040068.1 mouse_genomes_project 14 11780251 11784550 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0002690.1 MGP_129S1SvImJ_G0002572.1 mouse_genomes_project 14 47880154 47880804 + MGP_129S1SvImJ_P0002690 Trdv2-2 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0039836.1 MGP_129S1SvImJ_G0021462.1 mouse_genomes_project 14 58017621 58034357 - MGP_129S1SvImJ_P0039836 Tdh protein_coding protein_coding MGP_129S1SvImJ_T0039837.1 MGP_129S1SvImJ_G0021462.1 mouse_genomes_project 14 58017926 58025534 - MGP_129S1SvImJ_P0039837 Tdh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039838.1 MGP_129S1SvImJ_G0021462.1 mouse_genomes_project 14 58017981 58025534 - MGP_129S1SvImJ_P0039838 Tdh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039839.1 MGP_129S1SvImJ_G0021462.1 mouse_genomes_project 14 58017981 58025534 - MGP_129S1SvImJ_P0039839 Tdh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039840.1 MGP_129S1SvImJ_G0021462.1 mouse_genomes_project 14 58020893 58022414 - Tdh protein_coding retained_intron MGP_129S1SvImJ_T0039841.1 MGP_129S1SvImJ_G0021462.1 mouse_genomes_project 14 58029130 58034021 - Tdh protein_coding processed_transcript MGP_129S1SvImJ_T0039809.1 MGP_129S1SvImJ_G0021448.1 mouse_genomes_project 14 57121603 57151503 + MGP_129S1SvImJ_P0039809 Serpine3 protein_coding protein_coding MGP_129S1SvImJ_T0038669.1 MGP_129S1SvImJ_G0021105.1 mouse_genomes_project 14 23723286 23741260 - MGP_129S1SvImJ_P0038669 Prkcd protein_coding protein_coding MGP_129S1SvImJ_T0038670.1 MGP_129S1SvImJ_G0021105.1 mouse_genomes_project 14 23723294 23757163 - MGP_129S1SvImJ_P0038670 Prkcd protein_coding protein_coding MGP_129S1SvImJ_T0038671.1 MGP_129S1SvImJ_G0021105.1 mouse_genomes_project 14 23723296 23741260 - MGP_129S1SvImJ_P0038671 Prkcd protein_coding protein_coding MGP_129S1SvImJ_T0038672.1 MGP_129S1SvImJ_G0021105.1 mouse_genomes_project 14 23723532 23738780 - MGP_129S1SvImJ_P0038672 Prkcd protein_coding protein_coding MGP_129S1SvImJ_T0038673.1 MGP_129S1SvImJ_G0021105.1 mouse_genomes_project 14 23723591 23728146 - Prkcd protein_coding retained_intron MGP_129S1SvImJ_T0038674.1 MGP_129S1SvImJ_G0021105.1 mouse_genomes_project 14 23726345 23738780 - MGP_129S1SvImJ_P0038674 Prkcd protein_coding protein_coding MGP_129S1SvImJ_T0038675.1 MGP_129S1SvImJ_G0021105.1 mouse_genomes_project 14 23726345 23738780 - MGP_129S1SvImJ_P0038675 Prkcd protein_coding protein_coding MGP_129S1SvImJ_T0038676.1 MGP_129S1SvImJ_G0021105.1 mouse_genomes_project 14 23728200 23757127 - Prkcd protein_coding retained_intron MGP_129S1SvImJ_T0038677.1 MGP_129S1SvImJ_G0021105.1 mouse_genomes_project 14 23730335 23735302 - Prkcd protein_coding retained_intron MGP_129S1SvImJ_T0038678.1 MGP_129S1SvImJ_G0021105.1 mouse_genomes_project 14 23730444 23735111 - Prkcd protein_coding retained_intron MGP_129S1SvImJ_T0038679.1 MGP_129S1SvImJ_G0021105.1 mouse_genomes_project 14 23733563 23738303 - Prkcd protein_coding retained_intron MGP_129S1SvImJ_T0039638.1 MGP_129S1SvImJ_G0021373.1 mouse_genomes_project 14 49875409 49884425 + MGP_129S1SvImJ_P0039638 Nfatc4 protein_coding protein_coding MGP_129S1SvImJ_T0039639.1 MGP_129S1SvImJ_G0021373.1 mouse_genomes_project 14 49875409 49884425 + MGP_129S1SvImJ_P0039639 Nfatc4 protein_coding protein_coding MGP_129S1SvImJ_T0006724.1 MGP_129S1SvImJ_G0005560.1 mouse_genomes_project 14 57223491 57296090 + 4931440J10Rik lincRNA lincRNA MGP_129S1SvImJ_T0100683.1 MGP_129S1SvImJ_G0038750.1 mouse_genomes_project 14 52907292 52907425 - Gm25614 snoRNA snoRNA MGP_129S1SvImJ_T0039796.1 MGP_129S1SvImJ_G0021443.1 mouse_genomes_project 14 55995000 56000533 + MGP_129S1SvImJ_P0039796 Kcnrg protein_coding protein_coding MGP_129S1SvImJ_T0039617.1 MGP_129S1SvImJ_G0021364.1 mouse_genomes_project 14 49742512 49755980 - MGP_129S1SvImJ_P0039617 Tgm1 protein_coding protein_coding MGP_129S1SvImJ_T0039618.1 MGP_129S1SvImJ_G0021364.1 mouse_genomes_project 14 49742512 49755980 - MGP_129S1SvImJ_P0039618 Tgm1 protein_coding protein_coding MGP_129S1SvImJ_T0039619.1 MGP_129S1SvImJ_G0021364.1 mouse_genomes_project 14 49742512 49755576 - MGP_129S1SvImJ_P0039619 Tgm1 protein_coding protein_coding MGP_129S1SvImJ_T0002667.1 MGP_129S1SvImJ_G0002555.1 mouse_genomes_project 14 47386231 47386717 + MGP_129S1SvImJ_P0002667 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0039936.1 MGP_129S1SvImJ_G0021500.1 mouse_genomes_project 14 61619665 61628570 + MGP_129S1SvImJ_P0039936 Pnma2 protein_coding protein_coding MGP_129S1SvImJ_T0039937.1 MGP_129S1SvImJ_G0021500.1 mouse_genomes_project 14 61619703 61627331 + MGP_129S1SvImJ_P0039937 Pnma2 protein_coding protein_coding MGP_129S1SvImJ_T0039938.1 MGP_129S1SvImJ_G0021500.1 mouse_genomes_project 14 61619737 61623239 + Pnma2 protein_coding processed_transcript MGP_129S1SvImJ_T0039939.1 MGP_129S1SvImJ_G0021500.1 mouse_genomes_project 14 61622828 61624527 + Pnma2 protein_coding processed_transcript MGP_129S1SvImJ_T0039052.1 MGP_129S1SvImJ_G0021214.1 mouse_genomes_project 14 40462107 40475267 - MGP_129S1SvImJ_P0039052 Cnih1 protein_coding protein_coding MGP_129S1SvImJ_T0039053.1 MGP_129S1SvImJ_G0021214.1 mouse_genomes_project 14 40462107 40475267 - MGP_129S1SvImJ_P0039053 Cnih1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039054.1 MGP_129S1SvImJ_G0021214.1 mouse_genomes_project 14 40463049 40475119 - MGP_129S1SvImJ_P0039054 Cnih1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0039859.1 MGP_129S1SvImJ_G0021472.1 mouse_genomes_project 14 58687824 59026206 - MGP_129S1SvImJ_P0039859 Msra protein_coding protein_coding MGP_129S1SvImJ_T0003592.1 MGP_129S1SvImJ_G0003261.1 mouse_genomes_project 14 62027837 62037645 - Gm6878 antisense antisense MGP_129S1SvImJ_T0038724.1 MGP_129S1SvImJ_G0021117.1 mouse_genomes_project 14 24185728 24292319 + MGP_129S1SvImJ_P0038724 Pbrm1 protein_coding protein_coding MGP_129S1SvImJ_T0038725.1 MGP_129S1SvImJ_G0021117.1 mouse_genomes_project 14 24185728 24289629 + MGP_129S1SvImJ_P0038725 Pbrm1 protein_coding protein_coding MGP_129S1SvImJ_T0038726.1 MGP_129S1SvImJ_G0021117.1 mouse_genomes_project 14 24185739 24194104 + MGP_129S1SvImJ_P0038726 Pbrm1 protein_coding protein_coding MGP_129S1SvImJ_T0038727.1 MGP_129S1SvImJ_G0021117.1 mouse_genomes_project 14 24185747 24250499 + MGP_129S1SvImJ_P0038727 Pbrm1 protein_coding protein_coding MGP_129S1SvImJ_T0038728.1 MGP_129S1SvImJ_G0021117.1 mouse_genomes_project 14 24185760 24289695 + MGP_129S1SvImJ_P0038728 Pbrm1 protein_coding protein_coding MGP_129S1SvImJ_T0038729.1 MGP_129S1SvImJ_G0021117.1 mouse_genomes_project 14 24185767 24194072 + MGP_129S1SvImJ_P0038729 Pbrm1 protein_coding protein_coding MGP_129S1SvImJ_T0038730.1 MGP_129S1SvImJ_G0021117.1 mouse_genomes_project 14 24185789 24198941 + Pbrm1 protein_coding processed_transcript MGP_129S1SvImJ_T0038731.1 MGP_129S1SvImJ_G0021117.1 mouse_genomes_project 14 24185798 24289847 + MGP_129S1SvImJ_P0038731 Pbrm1 protein_coding protein_coding MGP_129S1SvImJ_T0038732.1 MGP_129S1SvImJ_G0021117.1 mouse_genomes_project 14 24185846 24292321 + MGP_129S1SvImJ_P0038732 Pbrm1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0038733.1 MGP_129S1SvImJ_G0021117.1 mouse_genomes_project 14 24192081 24284673 + MGP_129S1SvImJ_P0038733 Pbrm1 protein_coding protein_coding MGP_129S1SvImJ_T0038734.1 MGP_129S1SvImJ_G0021117.1 mouse_genomes_project 14 24192081 24289694 + MGP_129S1SvImJ_P0038734 Pbrm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038735.1 MGP_129S1SvImJ_G0021117.1 mouse_genomes_project 14 24192084 24289695 + MGP_129S1SvImJ_P0038735 Pbrm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038736.1 MGP_129S1SvImJ_G0021117.1 mouse_genomes_project 14 24192084 24289675 + MGP_129S1SvImJ_P0038736 Pbrm1 protein_coding protein_coding MGP_129S1SvImJ_T0038737.1 MGP_129S1SvImJ_G0021117.1 mouse_genomes_project 14 24192084 24290748 + MGP_129S1SvImJ_P0038737 Pbrm1 protein_coding protein_coding MGP_129S1SvImJ_T0038738.1 MGP_129S1SvImJ_G0021117.1 mouse_genomes_project 14 24192084 24289676 + MGP_129S1SvImJ_P0038738 Pbrm1 protein_coding protein_coding MGP_129S1SvImJ_T0038739.1 MGP_129S1SvImJ_G0021117.1 mouse_genomes_project 14 24192085 24290769 + MGP_129S1SvImJ_P0038739 Pbrm1 protein_coding protein_coding MGP_129S1SvImJ_T0038740.1 MGP_129S1SvImJ_G0021117.1 mouse_genomes_project 14 24194051 24252945 + MGP_129S1SvImJ_P0038740 Pbrm1 protein_coding protein_coding MGP_129S1SvImJ_T0038741.1 MGP_129S1SvImJ_G0021117.1 mouse_genomes_project 14 24252104 24255941 + Pbrm1 protein_coding retained_intron MGP_129S1SvImJ_T0002580.1 MGP_129S1SvImJ_G0002483.1 mouse_genomes_project 14 48144597 48144660 + MGP_129S1SvImJ_P0002580 Traj4 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0038942.1 MGP_129S1SvImJ_G0021173.1 mouse_genomes_project 14 27728509 27733023 - MGP_129S1SvImJ_P0038942 Sncg protein_coding protein_coding MGP_129S1SvImJ_T0006675.1 MGP_129S1SvImJ_G0005525.1 mouse_genomes_project 14 17814828 17818857 + Gm10398 lincRNA lincRNA MGP_129S1SvImJ_T0039413.1 MGP_129S1SvImJ_G0021317.1 mouse_genomes_project 14 48590027 48595845 + MGP_129S1SvImJ_P0039413 Psmb11 protein_coding protein_coding MGP_129S1SvImJ_T0038986.1 MGP_129S1SvImJ_G0021190.1 mouse_genomes_project 14 31903338 33070188 - MGP_129S1SvImJ_P0038986 Nrg3 protein_coding protein_coding MGP_129S1SvImJ_T0038987.1 MGP_129S1SvImJ_G0021190.1 mouse_genomes_project 14 31904863 33069925 - MGP_129S1SvImJ_P0038987 Nrg3 protein_coding protein_coding MGP_129S1SvImJ_T0038988.1 MGP_129S1SvImJ_G0021190.1 mouse_genomes_project 14 31904879 33069927 - MGP_129S1SvImJ_P0038988 Nrg3 protein_coding protein_coding MGP_129S1SvImJ_T0038989.1 MGP_129S1SvImJ_G0021190.1 mouse_genomes_project 14 32586895 33069766 - Nrg3 protein_coding retained_intron MGP_129S1SvImJ_T0003582.1 MGP_129S1SvImJ_G0003253.1 mouse_genomes_project 14 50924224 50927299 + 2410022M11Rik antisense antisense MGP_129S1SvImJ_T0000942.1 MGP_129S1SvImJ_G0000874.1 mouse_genomes_project 14 59415519 59418924 - TEC TEC MGP_129S1SvImJ_T0040040.1 MGP_129S1SvImJ_G0021536.1 mouse_genomes_project 14 65022032 65080322 - MGP_129S1SvImJ_P0040040 Piwil2 protein_coding protein_coding MGP_129S1SvImJ_T0013056.1 MGP_129S1SvImJ_G0011145.1 mouse_genomes_project 14 96167020 96167317 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039851.1 MGP_129S1SvImJ_G0021468.1 mouse_genomes_project 14 58545987 58594139 + MGP_129S1SvImJ_P0039851 Rp1l1 protein_coding protein_coding MGP_129S1SvImJ_T0038927.1 MGP_129S1SvImJ_G0021165.1 mouse_genomes_project 14 27387609 27410946 + MGP_129S1SvImJ_P0038927 Antxrl protein_coding protein_coding MGP_129S1SvImJ_T0003605.1 MGP_129S1SvImJ_G0003270.1 mouse_genomes_project 14 74925810 74928646 + Gm9748 antisense antisense MGP_129S1SvImJ_T0003606.1 MGP_129S1SvImJ_G0003270.1 mouse_genomes_project 14 74925884 74928594 + Gm9748 antisense antisense MGP_129S1SvImJ_T0099412.1 MGP_129S1SvImJ_G0037479.1 mouse_genomes_project 14 81767240 81767330 - Gm23926 snRNA snRNA MGP_129S1SvImJ_T0040014.1 MGP_129S1SvImJ_G0021532.1 mouse_genomes_project 14 64787155 64802796 - MGP_129S1SvImJ_P0040014 Pdlim2 protein_coding protein_coding MGP_129S1SvImJ_T0040015.1 MGP_129S1SvImJ_G0021532.1 mouse_genomes_project 14 64787168 64801934 - MGP_129S1SvImJ_P0040015 Pdlim2 protein_coding protein_coding MGP_129S1SvImJ_T0040016.1 MGP_129S1SvImJ_G0021532.1 mouse_genomes_project 14 64787299 64790783 - MGP_129S1SvImJ_P0040016 Pdlim2 protein_coding protein_coding MGP_129S1SvImJ_T0040017.1 MGP_129S1SvImJ_G0021532.1 mouse_genomes_project 14 64787484 64791338 - MGP_129S1SvImJ_P0040017 Pdlim2 protein_coding protein_coding MGP_129S1SvImJ_T0040018.1 MGP_129S1SvImJ_G0021532.1 mouse_genomes_project 14 64787535 64790917 - MGP_129S1SvImJ_P0040018 Pdlim2 protein_coding protein_coding MGP_129S1SvImJ_T0040019.1 MGP_129S1SvImJ_G0021532.1 mouse_genomes_project 14 64790707 64800548 - MGP_129S1SvImJ_P0040019 Pdlim2 protein_coding protein_coding MGP_129S1SvImJ_T0040020.1 MGP_129S1SvImJ_G0021532.1 mouse_genomes_project 14 64790733 64801934 - Pdlim2 protein_coding retained_intron MGP_129S1SvImJ_T0040021.1 MGP_129S1SvImJ_G0021532.1 mouse_genomes_project 14 64792341 64800541 - Pdlim2 protein_coding retained_intron MGP_129S1SvImJ_T0040022.1 MGP_129S1SvImJ_G0021532.1 mouse_genomes_project 14 64794372 64800535 - Pdlim2 protein_coding retained_intron MGP_129S1SvImJ_T0040023.1 MGP_129S1SvImJ_G0021532.1 mouse_genomes_project 14 64794450 64794926 - Pdlim2 protein_coding retained_intron MGP_129S1SvImJ_T0039672.1 MGP_129S1SvImJ_G0021397.1 mouse_genomes_project 14 50821764 50880817 - MGP_129S1SvImJ_P0039672 Pspc1 protein_coding protein_coding MGP_129S1SvImJ_T0039673.1 MGP_129S1SvImJ_G0021397.1 mouse_genomes_project 14 50823309 50880817 - MGP_129S1SvImJ_P0039673 Pspc1 protein_coding protein_coding MGP_129S1SvImJ_T0039674.1 MGP_129S1SvImJ_G0021397.1 mouse_genomes_project 14 50850337 50864320 - Pspc1 protein_coding retained_intron MGP_129S1SvImJ_T0039675.1 MGP_129S1SvImJ_G0021397.1 mouse_genomes_project 14 50850660 50880428 - MGP_129S1SvImJ_P0039675 Pspc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038710.1 MGP_129S1SvImJ_G0021112.1 mouse_genomes_project 14 24085329 24102945 - MGP_129S1SvImJ_P0038710 Itih1 protein_coding protein_coding MGP_129S1SvImJ_T0038711.1 MGP_129S1SvImJ_G0021112.1 mouse_genomes_project 14 24085329 24102933 - MGP_129S1SvImJ_P0038711 Itih1 protein_coding protein_coding MGP_129S1SvImJ_T0038712.1 MGP_129S1SvImJ_G0021112.1 mouse_genomes_project 14 24102345 24102942 - Itih1 protein_coding retained_intron MGP_129S1SvImJ_T0099386.1 MGP_129S1SvImJ_G0037453.1 mouse_genomes_project 14 14285233 14285325 + Gm25864 snRNA snRNA MGP_129S1SvImJ_T0098828.1 MGP_129S1SvImJ_G0036909.1 mouse_genomes_project 14 17157700 17164690 - Gm17105 sense_intronic sense_intronic MGP_129S1SvImJ_T0006706.1 MGP_129S1SvImJ_G0005546.1 mouse_genomes_project 14 45288987 45292958 + Gm21718 lincRNA lincRNA MGP_129S1SvImJ_T0006707.1 MGP_129S1SvImJ_G0005546.1 mouse_genomes_project 14 45289002 45293967 + Gm21718 lincRNA lincRNA MGP_129S1SvImJ_T0013028.1 MGP_129S1SvImJ_G0011117.1 mouse_genomes_project 14 50896444 50915296 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010029.1 MGP_129S1SvImJ_G0008145.1 mouse_genomes_project 14 97075177 97075294 + Gm22401 miRNA miRNA MGP_129S1SvImJ_T0039554.1 MGP_129S1SvImJ_G0021352.1 mouse_genomes_project 14 49616658 49621461 - MGP_129S1SvImJ_P0039554 Emc9 protein_coding protein_coding MGP_129S1SvImJ_T0039555.1 MGP_129S1SvImJ_G0021352.1 mouse_genomes_project 14 49616663 49617567 - Emc9 protein_coding retained_intron MGP_129S1SvImJ_T0039556.1 MGP_129S1SvImJ_G0021352.1 mouse_genomes_project 14 49616664 49621817 - MGP_129S1SvImJ_P0039556 Emc9 protein_coding protein_coding MGP_129S1SvImJ_T0039557.1 MGP_129S1SvImJ_G0021352.1 mouse_genomes_project 14 49619888 49621726 - Emc9 protein_coding retained_intron MGP_129S1SvImJ_T0039139.1 MGP_129S1SvImJ_G0021229.1 mouse_genomes_project 14 42967229 42987983 + MGP_129S1SvImJ_P0039139 Ap5m1 protein_coding protein_coding MGP_129S1SvImJ_T0039163.1 MGP_129S1SvImJ_G0021240.1 mouse_genomes_project 14 44141241 44142222 - MGP_129S1SvImJ_P0039163 Olfr731 protein_coding protein_coding MGP_129S1SvImJ_T0039681.1 MGP_129S1SvImJ_G0021403.1 mouse_genomes_project 14 51271262 51274640 - MGP_129S1SvImJ_P0039681 Gm4491 protein_coding protein_coding MGP_129S1SvImJ_T0002649.1 MGP_129S1SvImJ_G0002541.1 mouse_genomes_project 14 47001576 47002152 + MGP_129S1SvImJ_P0002649 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0039686.1 MGP_129S1SvImJ_G0021406.1 mouse_genomes_project 14 51604747 51708778 + MGP_129S1SvImJ_P0039686 Ift88 protein_coding protein_coding MGP_129S1SvImJ_T0039687.1 MGP_129S1SvImJ_G0021406.1 mouse_genomes_project 14 51604765 51622323 + MGP_129S1SvImJ_P0039687 Ift88 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039688.1 MGP_129S1SvImJ_G0021406.1 mouse_genomes_project 14 51604791 51708778 + Ift88 protein_coding retained_intron MGP_129S1SvImJ_T0039689.1 MGP_129S1SvImJ_G0021406.1 mouse_genomes_project 14 51626990 51668066 + MGP_129S1SvImJ_P0039689 Ift88 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039690.1 MGP_129S1SvImJ_G0021406.1 mouse_genomes_project 14 51669742 51677725 + Ift88 protein_coding retained_intron MGP_129S1SvImJ_T0039630.1 MGP_129S1SvImJ_G0021369.1 mouse_genomes_project 14 49803860 49805662 + MGP_129S1SvImJ_P0039630 Ltb4r2 protein_coding protein_coding MGP_129S1SvImJ_T0039966.1 MGP_129S1SvImJ_G0021507.1 mouse_genomes_project 14 62496940 62681685 - MGP_129S1SvImJ_P0039966 Dock5 protein_coding protein_coding MGP_129S1SvImJ_T0006693.1 MGP_129S1SvImJ_G0005537.1 mouse_genomes_project 14 39629182 39654277 + lincRNA lincRNA MGP_129S1SvImJ_T0040401.1 MGP_129S1SvImJ_G0021671.1 mouse_genomes_project 14 120371454 120380583 - MGP_129S1SvImJ_P0040401 Zic5 protein_coding protein_coding MGP_129S1SvImJ_T0040402.1 MGP_129S1SvImJ_G0021671.1 mouse_genomes_project 14 120373731 120374681 - Zic5 protein_coding processed_transcript MGP_129S1SvImJ_T0010017.1 MGP_129S1SvImJ_G0008133.1 mouse_genomes_project 14 59153680 59153767 + Mir3078 miRNA miRNA MGP_129S1SvImJ_T0040228.1 MGP_129S1SvImJ_G0021604.1 mouse_genomes_project 14 75010553 75015874 - MGP_129S1SvImJ_P0040228 Gm10845 protein_coding protein_coding MGP_129S1SvImJ_T0038649.1 MGP_129S1SvImJ_G0021098.1 mouse_genomes_project 14 23072208 23079727 + MGP_129S1SvImJ_P0038649 Selk protein_coding protein_coding MGP_129S1SvImJ_T0038650.1 MGP_129S1SvImJ_G0021098.1 mouse_genomes_project 14 23072336 23077498 + Selk protein_coding processed_transcript MGP_129S1SvImJ_T0038651.1 MGP_129S1SvImJ_G0021098.1 mouse_genomes_project 14 23072418 23080891 + MGP_129S1SvImJ_P0038651 Selk protein_coding unknown_likely_coding MGP_129S1SvImJ_T0013029.1 MGP_129S1SvImJ_G0011118.1 mouse_genomes_project 14 50896444 50915296 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099417.1 MGP_129S1SvImJ_G0037484.1 mouse_genomes_project 14 94197803 94197966 - Gm25831 snRNA snRNA MGP_129S1SvImJ_T0013012.1 MGP_129S1SvImJ_G0011101.1 mouse_genomes_project 14 44572487 44572770 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009998.1 MGP_129S1SvImJ_G0008114.1 mouse_genomes_project 14 23697726 23697786 + Mir3076 miRNA miRNA MGP_129S1SvImJ_T0039156.1 MGP_129S1SvImJ_G0021234.1 mouse_genomes_project 14 43823810 43831461 - MGP_129S1SvImJ_P0039156 Olfr722 protein_coding protein_coding MGP_129S1SvImJ_T0006749.1 MGP_129S1SvImJ_G0005579.1 mouse_genomes_project 14 118092294 118096945 - Gm26679 lincRNA lincRNA MGP_129S1SvImJ_T0006695.1 MGP_129S1SvImJ_G0005539.1 mouse_genomes_project 14 40230530 40242597 + E130120K24Rik lincRNA lincRNA MGP_129S1SvImJ_T0002678.1 MGP_129S1SvImJ_G0002564.1 mouse_genomes_project 14 47675610 47676227 + MGP_129S1SvImJ_P0002678 Trav3-4 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0040388.1 MGP_129S1SvImJ_G0021663.1 mouse_genomes_project 14 119365287 119534878 - MGP_129S1SvImJ_P0040388 Dock9 protein_coding protein_coding MGP_129S1SvImJ_T0040389.1 MGP_129S1SvImJ_G0021663.1 mouse_genomes_project 14 119365287 119654980 - MGP_129S1SvImJ_P0040389 Dock9 protein_coding protein_coding MGP_129S1SvImJ_T0040390.1 MGP_129S1SvImJ_G0021663.1 mouse_genomes_project 14 119366751 119419504 - MGP_129S1SvImJ_P0040390 Dock9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040391.1 MGP_129S1SvImJ_G0021663.1 mouse_genomes_project 14 119421336 119534774 - MGP_129S1SvImJ_P0040391 Dock9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040224.1 MGP_129S1SvImJ_G0021603.1 mouse_genomes_project 14 74922677 74927215 - MGP_129S1SvImJ_P0040224 Pcdh8 protein_coding protein_coding MGP_129S1SvImJ_T0040225.1 MGP_129S1SvImJ_G0021603.1 mouse_genomes_project 14 74922682 74927215 - MGP_129S1SvImJ_P0040225 Pcdh8 protein_coding protein_coding MGP_129S1SvImJ_T0040226.1 MGP_129S1SvImJ_G0021603.1 mouse_genomes_project 14 74922686 74927215 - Pcdh8 protein_coding retained_intron MGP_129S1SvImJ_T0040227.1 MGP_129S1SvImJ_G0021603.1 mouse_genomes_project 14 74924934 74927107 - Pcdh8 protein_coding processed_transcript MGP_129S1SvImJ_T0100705.1 MGP_129S1SvImJ_G0038772.1 mouse_genomes_project 14 93533928 93534066 - Gm23276 snoRNA snoRNA MGP_129S1SvImJ_T0017445.1 MGP_129S1SvImJ_G0015278.1 mouse_genomes_project 14 73103887 73125866 + Gm19301 processed_transcript processed_transcript MGP_129S1SvImJ_T0038296.1 MGP_129S1SvImJ_G0020992.1 mouse_genomes_project 14 633482 647112 - MGP_129S1SvImJ_P0038296 Fam107a protein_coding protein_coding MGP_129S1SvImJ_T0038297.1 MGP_129S1SvImJ_G0020992.1 mouse_genomes_project 14 633482 647114 - MGP_129S1SvImJ_P0038297 Fam107a protein_coding protein_coding MGP_129S1SvImJ_T0038298.1 MGP_129S1SvImJ_G0020992.1 mouse_genomes_project 14 634752 655893 - MGP_129S1SvImJ_P0038298 Fam107a protein_coding protein_coding MGP_129S1SvImJ_T0038299.1 MGP_129S1SvImJ_G0020992.1 mouse_genomes_project 14 636814 647130 - MGP_129S1SvImJ_P0038299 Fam107a protein_coding protein_coding MGP_129S1SvImJ_T0006710.1 MGP_129S1SvImJ_G0005548.1 mouse_genomes_project 14 45997026 45999503 - Gm16617 lincRNA lincRNA MGP_129S1SvImJ_T0002543.1 MGP_129S1SvImJ_G0002446.1 mouse_genomes_project 14 48101229 48101292 + MGP_129S1SvImJ_P0002543 Traj45 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0013018.1 MGP_129S1SvImJ_G0011107.1 mouse_genomes_project 14 46487232 46487517 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0040046.1 MGP_129S1SvImJ_G0021540.1 mouse_genomes_project 14 65174521 65177672 - MGP_129S1SvImJ_P0040046 Sftpc protein_coding protein_coding MGP_129S1SvImJ_T0038648.1 MGP_129S1SvImJ_G0021097.1 mouse_genomes_project 14 22086710 22102887 + MGP_129S1SvImJ_P0038648 Lrtm1 protein_coding protein_coding MGP_129S1SvImJ_T0002574.1 MGP_129S1SvImJ_G0002477.1 mouse_genomes_project 14 48134840 48134898 + MGP_129S1SvImJ_P0002574 Traj12 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0002604.1 MGP_129S1SvImJ_G0002505.1 mouse_genomes_project 14 48133395 48133429 + TR_J_pseudogene TR_J_pseudogene MGP_129S1SvImJ_T0102236.1 MGP_129S1SvImJ_G0040070.1 mouse_genomes_project 14 18820043 18829437 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0039679.1 MGP_129S1SvImJ_G0021401.1 mouse_genomes_project 14 51189486 51211795 - MGP_129S1SvImJ_P0039679 Gja3 protein_coding protein_coding MGP_129S1SvImJ_T0039794.1 MGP_129S1SvImJ_G0021442.1 mouse_genomes_project 14 55919166 55946321 - MGP_129S1SvImJ_P0039794 Spryd7 protein_coding protein_coding MGP_129S1SvImJ_T0039795.1 MGP_129S1SvImJ_G0021442.1 mouse_genomes_project 14 55921468 55946193 - MGP_129S1SvImJ_P0039795 Spryd7 protein_coding protein_coding MGP_129S1SvImJ_T0039454.1 MGP_129S1SvImJ_G0021327.1 mouse_genomes_project 14 48865368 48870203 + MGP_129S1SvImJ_P0039454 Bcl2l2 protein_coding protein_coding MGP_129S1SvImJ_T0039455.1 MGP_129S1SvImJ_G0021327.1 mouse_genomes_project 14 48865372 48866049 + Bcl2l2 protein_coding retained_intron MGP_129S1SvImJ_T0039457.1 MGP_129S1SvImJ_G0021327.1 mouse_genomes_project 14 48865447 48867521 + MGP_129S1SvImJ_P0039457 Bcl2l2 protein_coding protein_coding MGP_129S1SvImJ_T0039458.1 MGP_129S1SvImJ_G0021327.1 mouse_genomes_project 14 48865498 48870064 + MGP_129S1SvImJ_P0039458 Bcl2l2 protein_coding protein_coding MGP_129S1SvImJ_T0039881.1 MGP_129S1SvImJ_G0021482.1 mouse_genomes_project 14 60212234 60268323 + MGP_129S1SvImJ_P0039881 Nuggc protein_coding protein_coding MGP_129S1SvImJ_T0039882.1 MGP_129S1SvImJ_G0021482.1 mouse_genomes_project 14 60221146 60268236 + MGP_129S1SvImJ_P0039882 Nuggc protein_coding protein_coding MGP_129S1SvImJ_T0013027.1 MGP_129S1SvImJ_G0011116.1 mouse_genomes_project 14 50890014 50890185 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099425.1 MGP_129S1SvImJ_G0037492.1 mouse_genomes_project 14 101856267 101856375 - Gm24207 snRNA snRNA MGP_129S1SvImJ_T0039636.1 MGP_129S1SvImJ_G0021372.1 mouse_genomes_project 14 49830835 49834697 - MGP_129S1SvImJ_P0039636 Ripk3 protein_coding protein_coding MGP_129S1SvImJ_T0039637.1 MGP_129S1SvImJ_G0021372.1 mouse_genomes_project 14 49831036 49834476 - MGP_129S1SvImJ_P0039637 Ripk3 protein_coding protein_coding MGP_129S1SvImJ_T0038640.1 MGP_129S1SvImJ_G0021094.1 mouse_genomes_project 14 20632646 21516139 + MGP_129S1SvImJ_P0038640 Erc2 protein_coding protein_coding MGP_129S1SvImJ_T0038641.1 MGP_129S1SvImJ_G0021094.1 mouse_genomes_project 14 20800001 21353508 + MGP_129S1SvImJ_P0038641 Erc2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0006688.1 MGP_129S1SvImJ_G0005533.1 mouse_genomes_project 14 25951669 25953541 + Gm28651 lincRNA lincRNA MGP_129S1SvImJ_T0010018.1 MGP_129S1SvImJ_G0008134.1 mouse_genomes_project 14 61791852 61791970 + Gm27647 miRNA miRNA MGP_129S1SvImJ_T0038698.1 MGP_129S1SvImJ_G0021109.1 mouse_genomes_project 14 24023930 24026282 + MGP_129S1SvImJ_P0038698 Mustn1 protein_coding protein_coding MGP_129S1SvImJ_T0013034.1 MGP_129S1SvImJ_G0011123.1 mouse_genomes_project 14 53714255 53714550 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039579.1 MGP_129S1SvImJ_G0021356.1 mouse_genomes_project 14 49659157 49666475 + MGP_129S1SvImJ_P0039579 Rec8 protein_coding protein_coding MGP_129S1SvImJ_T0039580.1 MGP_129S1SvImJ_G0021356.1 mouse_genomes_project 14 49659303 49659937 + Rec8 protein_coding retained_intron MGP_129S1SvImJ_T0039581.1 MGP_129S1SvImJ_G0021356.1 mouse_genomes_project 14 49664648 49665590 + Rec8 protein_coding retained_intron MGP_129S1SvImJ_T0039582.1 MGP_129S1SvImJ_G0021356.1 mouse_genomes_project 14 49665998 49666475 + Rec8 protein_coding retained_intron MGP_129S1SvImJ_T0011398.1 MGP_129S1SvImJ_G0009514.1 mouse_genomes_project 14 56064278 56064534 + Gm27928 misc_RNA misc_RNA MGP_129S1SvImJ_T0038414.1 MGP_129S1SvImJ_G0021035.1 mouse_genomes_project 14 13152635 13211498 - MGP_129S1SvImJ_P0038414 Cfap70 protein_coding protein_coding MGP_129S1SvImJ_T0038415.1 MGP_129S1SvImJ_G0021035.1 mouse_genomes_project 14 13152635 13211498 - MGP_129S1SvImJ_P0038415 Cfap70 protein_coding protein_coding MGP_129S1SvImJ_T0038416.1 MGP_129S1SvImJ_G0021035.1 mouse_genomes_project 14 13152635 13211498 - MGP_129S1SvImJ_P0038416 Cfap70 protein_coding protein_coding MGP_129S1SvImJ_T0038417.1 MGP_129S1SvImJ_G0021035.1 mouse_genomes_project 14 13152638 13211495 - MGP_129S1SvImJ_P0038417 Cfap70 protein_coding protein_coding MGP_129S1SvImJ_T0038418.1 MGP_129S1SvImJ_G0021035.1 mouse_genomes_project 14 13184173 13211499 - Cfap70 protein_coding retained_intron MGP_129S1SvImJ_T0038419.1 MGP_129S1SvImJ_G0021035.1 mouse_genomes_project 14 13184681 13188951 - Cfap70 protein_coding processed_transcript MGP_129S1SvImJ_T0038420.1 MGP_129S1SvImJ_G0021035.1 mouse_genomes_project 14 13198644 13211496 - MGP_129S1SvImJ_P0038420 Cfap70 protein_coding protein_coding MGP_129S1SvImJ_T0038421.1 MGP_129S1SvImJ_G0021035.1 mouse_genomes_project 14 13206349 13207982 - Cfap70 protein_coding retained_intron MGP_129S1SvImJ_T0010041.1 MGP_129S1SvImJ_G0008157.1 mouse_genomes_project 14 115509709 115509814 - Mir6239 miRNA miRNA MGP_129S1SvImJ_T0038492.1 MGP_129S1SvImJ_G0021055.1 mouse_genomes_project 14 14592613 14637829 + MGP_129S1SvImJ_P0038492 Samd8 protein_coding protein_coding MGP_129S1SvImJ_T0038493.1 MGP_129S1SvImJ_G0021055.1 mouse_genomes_project 14 14592630 14637829 + MGP_129S1SvImJ_P0038493 Samd8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038494.1 MGP_129S1SvImJ_G0021055.1 mouse_genomes_project 14 14592883 14637767 + MGP_129S1SvImJ_P0038494 Samd8 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0038495.1 MGP_129S1SvImJ_G0021055.1 mouse_genomes_project 14 14593634 14644369 + MGP_129S1SvImJ_P0038495 Samd8 protein_coding protein_coding MGP_129S1SvImJ_T0038496.1 MGP_129S1SvImJ_G0021055.1 mouse_genomes_project 14 14636392 14637501 + Samd8 protein_coding retained_intron MGP_129S1SvImJ_T0002630.1 MGP_129S1SvImJ_G0002525.1 mouse_genomes_project 14 46754224 46754750 + MGP_129S1SvImJ_P0002630 Trav4-2 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002558.1 MGP_129S1SvImJ_G0002461.1 mouse_genomes_project 14 48119248 48119308 + MGP_129S1SvImJ_P0002558 Traj29 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0038955.1 MGP_129S1SvImJ_G0021178.1 mouse_genomes_project 14 27950632 27960145 - MGP_129S1SvImJ_P0038955 Opn4 protein_coding protein_coding MGP_129S1SvImJ_T0038956.1 MGP_129S1SvImJ_G0021178.1 mouse_genomes_project 14 27952346 27960145 - MGP_129S1SvImJ_P0038956 Opn4 protein_coding protein_coding MGP_129S1SvImJ_T0038319.1 MGP_129S1SvImJ_G0020999.1 mouse_genomes_project 14 4753141 4758760 - MGP_129S1SvImJ_P0038319 Fezf2 protein_coding protein_coding MGP_129S1SvImJ_T0040276.1 MGP_129S1SvImJ_G0021623.1 mouse_genomes_project 14 98083778 98129977 + MGP_129S1SvImJ_P0040276 protein_coding protein_coding MGP_129S1SvImJ_T0038889.1 MGP_129S1SvImJ_G0021151.1 mouse_genomes_project 14 26103060 26105888 + MGP_129S1SvImJ_P0038889 Fam170b protein_coding protein_coding MGP_129S1SvImJ_T0100672.1 MGP_129S1SvImJ_G0038739.1 mouse_genomes_project 14 27441073 27441162 + Gm24998 snoRNA snoRNA MGP_129S1SvImJ_T0000932.1 MGP_129S1SvImJ_G0000864.1 mouse_genomes_project 14 41531845 41534405 + TEC TEC MGP_129S1SvImJ_T0040079.1 MGP_129S1SvImJ_G0021553.1 mouse_genomes_project 14 67768493 67790239 - MGP_129S1SvImJ_P0040079 Cysltr2 protein_coding protein_coding MGP_129S1SvImJ_T0040080.1 MGP_129S1SvImJ_G0021553.1 mouse_genomes_project 14 67768493 67790239 - MGP_129S1SvImJ_P0040080 Cysltr2 protein_coding protein_coding MGP_129S1SvImJ_T0002619.1 MGP_129S1SvImJ_G0002517.1 mouse_genomes_project 14 46496622 46497599 + MGP_129S1SvImJ_P0002619 Trav1 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002620.1 MGP_129S1SvImJ_G0002517.1 mouse_genomes_project 14 46496661 46497599 + MGP_129S1SvImJ_P0002620 Trav1 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0003535.1 MGP_129S1SvImJ_G0003219.1 mouse_genomes_project 14 3070987 3109461 + Fhitos antisense antisense MGP_129S1SvImJ_T0040392.1 MGP_129S1SvImJ_G0021664.1 mouse_genomes_project 14 119754717 119897015 + MGP_129S1SvImJ_P0040392 Ubac2 protein_coding protein_coding MGP_129S1SvImJ_T0038999.1 MGP_129S1SvImJ_G0021194.1 mouse_genomes_project 14 34685970 34699142 - MGP_129S1SvImJ_P0038999 Dydc2 protein_coding protein_coding MGP_129S1SvImJ_T0038570.1 MGP_129S1SvImJ_G0021072.1 mouse_genomes_project 14 18869808 18873481 - MGP_129S1SvImJ_P0038570 Tmem254c protein_coding protein_coding MGP_129S1SvImJ_T0038573.1 MGP_129S1SvImJ_G0021072.1 mouse_genomes_project 14 18869978 18873059 - MGP_129S1SvImJ_P0038573 Tmem254c protein_coding protein_coding MGP_129S1SvImJ_T0038574.1 MGP_129S1SvImJ_G0021072.1 mouse_genomes_project 14 18870558 18873452 - MGP_129S1SvImJ_P0038574 Tmem254c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038575.1 MGP_129S1SvImJ_G0021072.1 mouse_genomes_project 14 18870565 18871597 - Tmem254c protein_coding retained_intron MGP_129S1SvImJ_T0100719.1 MGP_129S1SvImJ_G0038786.1 mouse_genomes_project 14 121847094 121847222 + Gm25272 snoRNA snoRNA MGP_129S1SvImJ_T0039346.1 MGP_129S1SvImJ_G0021297.1 mouse_genomes_project 14 46352490 46357645 - Sall2 protein_coding processed_transcript MGP_129S1SvImJ_T0039347.1 MGP_129S1SvImJ_G0021297.1 mouse_genomes_project 14 46352490 46371908 - MGP_129S1SvImJ_P0039347 Sall2 protein_coding protein_coding MGP_129S1SvImJ_T0101627.1 MGP_129S1SvImJ_G0039666.1 mouse_genomes_project 14 23521749 23522200 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0098831.1 MGP_129S1SvImJ_G0036912.1 mouse_genomes_project 14 119032462 119037778 + B930095G15Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0013021.1 MGP_129S1SvImJ_G0011110.1 mouse_genomes_project 14 46814615 47382152 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039657.1 MGP_129S1SvImJ_G0021389.1 mouse_genomes_project 14 50275611 50283905 - MGP_129S1SvImJ_P0039657 Gzmf protein_coding protein_coding MGP_129S1SvImJ_T0099421.1 MGP_129S1SvImJ_G0037488.1 mouse_genomes_project 14 96100360 96100546 - Gm22970 snRNA snRNA MGP_129S1SvImJ_T0039972.1 MGP_129S1SvImJ_G0021511.1 mouse_genomes_project 14 63334123 63352779 - MGP_129S1SvImJ_P0039972 Adamdec1 protein_coding protein_coding MGP_129S1SvImJ_T0013016.1 MGP_129S1SvImJ_G0011105.1 mouse_genomes_project 14 46426463 46427091 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039062.1 MGP_129S1SvImJ_G0021217.1 mouse_genomes_project 14 40575995 40817487 + MGP_129S1SvImJ_P0039062 Samd4 protein_coding protein_coding MGP_129S1SvImJ_T0039063.1 MGP_129S1SvImJ_G0021217.1 mouse_genomes_project 14 40576106 40821535 + MGP_129S1SvImJ_P0039063 Samd4 protein_coding protein_coding MGP_129S1SvImJ_T0039064.1 MGP_129S1SvImJ_G0021217.1 mouse_genomes_project 14 40576647 40579180 + Samd4 protein_coding processed_transcript MGP_129S1SvImJ_T0039065.1 MGP_129S1SvImJ_G0021217.1 mouse_genomes_project 14 40578708 40821529 + MGP_129S1SvImJ_P0039065 Samd4 protein_coding protein_coding MGP_129S1SvImJ_T0039066.1 MGP_129S1SvImJ_G0021217.1 mouse_genomes_project 14 40714943 40716861 + Samd4 protein_coding processed_transcript MGP_129S1SvImJ_T0039067.1 MGP_129S1SvImJ_G0021217.1 mouse_genomes_project 14 40714950 40815976 + MGP_129S1SvImJ_P0039067 Samd4 protein_coding protein_coding MGP_129S1SvImJ_T0039068.1 MGP_129S1SvImJ_G0021217.1 mouse_genomes_project 14 40729737 40815801 + MGP_129S1SvImJ_P0039068 Samd4 protein_coding protein_coding MGP_129S1SvImJ_T0039069.1 MGP_129S1SvImJ_G0021217.1 mouse_genomes_project 14 40801508 40803473 + Samd4 protein_coding processed_transcript MGP_129S1SvImJ_T0039177.1 MGP_129S1SvImJ_G0021251.1 mouse_genomes_project 14 44372146 44372772 + MGP_129S1SvImJ_P0039177 protein_coding protein_coding MGP_129S1SvImJ_T0101630.1 MGP_129S1SvImJ_G0039668.1 mouse_genomes_project 14 49037351 49041784 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101631.1 MGP_129S1SvImJ_G0039668.1 mouse_genomes_project 14 49040628 49041607 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0099410.1 MGP_129S1SvImJ_G0037477.1 mouse_genomes_project 14 70505575 70505682 - Gm23622 snRNA snRNA MGP_129S1SvImJ_T0002666.1 MGP_129S1SvImJ_G0002554.1 mouse_genomes_project 14 47377637 47378167 + MGP_129S1SvImJ_P0002666 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0010036.1 MGP_129S1SvImJ_G0008152.1 mouse_genomes_project 14 112498157 112498253 + Mir18 miRNA miRNA MGP_129S1SvImJ_T0038478.1 MGP_129S1SvImJ_G0021054.1 mouse_genomes_project 14 14574782 14583505 - MGP_129S1SvImJ_P0038478 Dusp13 protein_coding protein_coding MGP_129S1SvImJ_T0038479.1 MGP_129S1SvImJ_G0021054.1 mouse_genomes_project 14 14574783 14590703 - MGP_129S1SvImJ_P0038479 Dusp13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038480.1 MGP_129S1SvImJ_G0021054.1 mouse_genomes_project 14 14574783 14582439 - MGP_129S1SvImJ_P0038480 Dusp13 protein_coding protein_coding MGP_129S1SvImJ_T0038481.1 MGP_129S1SvImJ_G0021054.1 mouse_genomes_project 14 14574783 14584912 - MGP_129S1SvImJ_P0038481 Dusp13 protein_coding protein_coding MGP_129S1SvImJ_T0038482.1 MGP_129S1SvImJ_G0021054.1 mouse_genomes_project 14 14574783 14583534 - MGP_129S1SvImJ_P0038482 Dusp13 protein_coding protein_coding MGP_129S1SvImJ_T0038483.1 MGP_129S1SvImJ_G0021054.1 mouse_genomes_project 14 14574783 14583548 - MGP_129S1SvImJ_P0038483 Dusp13 protein_coding protein_coding MGP_129S1SvImJ_T0038484.1 MGP_129S1SvImJ_G0021054.1 mouse_genomes_project 14 14574783 14590705 - MGP_129S1SvImJ_P0038484 Dusp13 protein_coding protein_coding MGP_129S1SvImJ_T0038485.1 MGP_129S1SvImJ_G0021054.1 mouse_genomes_project 14 14574786 14590725 - MGP_129S1SvImJ_P0038485 Dusp13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038486.1 MGP_129S1SvImJ_G0021054.1 mouse_genomes_project 14 14574977 14590703 - MGP_129S1SvImJ_P0038486 Dusp13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038487.1 MGP_129S1SvImJ_G0021054.1 mouse_genomes_project 14 14575037 14590709 - MGP_129S1SvImJ_P0038487 Dusp13 protein_coding protein_coding MGP_129S1SvImJ_T0038488.1 MGP_129S1SvImJ_G0021054.1 mouse_genomes_project 14 14582172 14590709 - Dusp13 protein_coding processed_transcript MGP_129S1SvImJ_T0038489.1 MGP_129S1SvImJ_G0021054.1 mouse_genomes_project 14 14582181 14588529 - MGP_129S1SvImJ_P0038489 Dusp13 protein_coding protein_coding MGP_129S1SvImJ_T0038490.1 MGP_129S1SvImJ_G0021054.1 mouse_genomes_project 14 14585544 14590721 - MGP_129S1SvImJ_P0038490 Dusp13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038491.1 MGP_129S1SvImJ_G0021054.1 mouse_genomes_project 14 14586909 14593264 - Dusp13 protein_coding processed_transcript MGP_129S1SvImJ_T0010021.1 MGP_129S1SvImJ_G0008137.1 mouse_genomes_project 14 64263640 64263713 + Mir6950 miRNA miRNA MGP_129S1SvImJ_T0003567.1 MGP_129S1SvImJ_G0003242.1 mouse_genomes_project 14 40812025 40833448 - Gm10371 antisense antisense MGP_129S1SvImJ_T0040232.1 MGP_129S1SvImJ_G0021607.1 mouse_genomes_project 14 82117927 82621457 - MGP_129S1SvImJ_P0040232 Diaph3 protein_coding protein_coding MGP_129S1SvImJ_T0040233.1 MGP_129S1SvImJ_G0021607.1 mouse_genomes_project 14 82118883 82621347 - MGP_129S1SvImJ_P0040233 Diaph3 protein_coding protein_coding MGP_129S1SvImJ_T0040393.1 MGP_129S1SvImJ_G0021665.1 mouse_genomes_project 14 119788766 119793106 - MGP_129S1SvImJ_P0040393 Gpr18 protein_coding protein_coding MGP_129S1SvImJ_T0040395.1 MGP_129S1SvImJ_G0021667.1 mouse_genomes_project 14 119910622 119914359 + MGP_129S1SvImJ_P0040395 Timm8a2 protein_coding protein_coding MGP_129S1SvImJ_T0003593.1 MGP_129S1SvImJ_G0003262.1 mouse_genomes_project 14 63932233 63938695 - 1700092C10Rik antisense antisense MGP_129S1SvImJ_T0039153.1 MGP_129S1SvImJ_G0021233.1 mouse_genomes_project 14 43600168 43718690 - MGP_129S1SvImJ_P0039153 3632451O06Rik protein_coding protein_coding MGP_129S1SvImJ_T0039154.1 MGP_129S1SvImJ_G0021233.1 mouse_genomes_project 14 43600276 43718678 - MGP_129S1SvImJ_P0039154 3632451O06Rik protein_coding protein_coding MGP_129S1SvImJ_T0039155.1 MGP_129S1SvImJ_G0021233.1 mouse_genomes_project 14 43657937 43684301 - 3632451O06Rik protein_coding processed_transcript MGP_129S1SvImJ_T0002631.1 MGP_129S1SvImJ_G0002526.1 mouse_genomes_project 14 46768215 46769884 + MGP_129S1SvImJ_P0002631 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002634.1 MGP_129S1SvImJ_G0002526.1 mouse_genomes_project 14 46769579 46769884 + MGP_129S1SvImJ_P0002634 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0038562.1 MGP_129S1SvImJ_G0021069.1 mouse_genomes_project 14 18830783 18846037 - MGP_129S1SvImJ_P0038562 protein_coding protein_coding MGP_129S1SvImJ_T0038569.1 MGP_129S1SvImJ_G0021069.1 mouse_genomes_project 14 18832159 18846000 - MGP_129S1SvImJ_P0038569 protein_coding protein_coding MGP_129S1SvImJ_T0039834.1 MGP_129S1SvImJ_G0021461.1 mouse_genomes_project 14 57957387 57990781 + MGP_129S1SvImJ_P0039834 Fam167a protein_coding protein_coding MGP_129S1SvImJ_T0039835.1 MGP_129S1SvImJ_G0021461.1 mouse_genomes_project 14 57957402 57965919 + Fam167a protein_coding retained_intron MGP_129S1SvImJ_T0102239.1 MGP_129S1SvImJ_G0040073.1 mouse_genomes_project 14 37563978 37564419 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0039253.1 MGP_129S1SvImJ_G0021285.1 mouse_genomes_project 14 45945178 45945792 - MGP_129S1SvImJ_P0039253 Rnase13 protein_coding protein_coding MGP_129S1SvImJ_T0039646.1 MGP_129S1SvImJ_G0021378.1 mouse_genomes_project 14 50006672 50010075 - MGP_129S1SvImJ_P0039646 Cma1 protein_coding protein_coding MGP_129S1SvImJ_T0011390.1 MGP_129S1SvImJ_G0009506.1 mouse_genomes_project 14 28951690 28951858 + Gm27617 misc_RNA misc_RNA MGP_129S1SvImJ_T0002579.1 MGP_129S1SvImJ_G0002482.1 mouse_genomes_project 14 48142074 48142136 + MGP_129S1SvImJ_P0002579 Traj5 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0002657.1 MGP_129S1SvImJ_G0002547.1 mouse_genomes_project 14 47188174 47188756 + MGP_129S1SvImJ_P0002657 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0040147.1 MGP_129S1SvImJ_G0021570.1 mouse_genomes_project 14 70284315 70367263 + MGP_129S1SvImJ_P0040147 Siah3 protein_coding protein_coding MGP_129S1SvImJ_T0039677.1 MGP_129S1SvImJ_G0021399.1 mouse_genomes_project 14 51026643 51110727 + MGP_129S1SvImJ_P0039677 Zmym2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0038402.1 MGP_129S1SvImJ_G0021027.1 mouse_genomes_project 14 12814625 12822152 - MGP_129S1SvImJ_P0038402 Saysd1 protein_coding protein_coding MGP_129S1SvImJ_T0038860.1 MGP_129S1SvImJ_G0021140.1 mouse_genomes_project 14 25398762 25412419 + MGP_129S1SvImJ_P0038860 protein_coding protein_coding MGP_129S1SvImJ_T0039616.1 MGP_129S1SvImJ_G0021363.1 mouse_genomes_project 14 49721976 49724711 - MGP_129S1SvImJ_P0039616 Tinf2 protein_coding protein_coding MGP_129S1SvImJ_T0002743.1 MGP_129S1SvImJ_G0002618.1 mouse_genomes_project 14 47660285 47660452 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0013031.1 MGP_129S1SvImJ_G0011120.1 mouse_genomes_project 14 50896444 50915281 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010043.1 MGP_129S1SvImJ_G0008159.1 mouse_genomes_project 14 116193827 116193931 - Mir6391 miRNA miRNA MGP_129S1SvImJ_T0039187.1 MGP_129S1SvImJ_G0021261.1 mouse_genomes_project 14 44846227 44847742 - MGP_129S1SvImJ_P0039187 A930018M24Rik protein_coding protein_coding MGP_129S1SvImJ_T0039825.1 MGP_129S1SvImJ_G0021456.1 mouse_genomes_project 14 57611091 57634642 + MGP_129S1SvImJ_P0039825 Ctsb protein_coding protein_coding MGP_129S1SvImJ_T0038902.1 MGP_129S1SvImJ_G0021155.1 mouse_genomes_project 14 26511966 26514973 + Arhgap22 protein_coding processed_transcript MGP_129S1SvImJ_T0038903.1 MGP_129S1SvImJ_G0021155.1 mouse_genomes_project 14 26512116 26670792 + MGP_129S1SvImJ_P0038903 Arhgap22 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0038904.1 MGP_129S1SvImJ_G0021155.1 mouse_genomes_project 14 26546031 26569842 + Arhgap22 protein_coding processed_transcript MGP_129S1SvImJ_T0038905.1 MGP_129S1SvImJ_G0021155.1 mouse_genomes_project 14 26604459 26670782 + Arhgap22 protein_coding processed_transcript MGP_129S1SvImJ_T0038906.1 MGP_129S1SvImJ_G0021155.1 mouse_genomes_project 14 26617930 26670784 + MGP_129S1SvImJ_P0038906 Arhgap22 protein_coding protein_coding MGP_129S1SvImJ_T0038907.1 MGP_129S1SvImJ_G0021155.1 mouse_genomes_project 14 26652215 26663461 + Arhgap22 protein_coding processed_transcript MGP_129S1SvImJ_T0038908.1 MGP_129S1SvImJ_G0021155.1 mouse_genomes_project 14 26663182 26665346 + Arhgap22 protein_coding processed_transcript MGP_129S1SvImJ_T0038909.1 MGP_129S1SvImJ_G0021155.1 mouse_genomes_project 14 26663261 26664218 + Arhgap22 protein_coding processed_transcript MGP_129S1SvImJ_T0003566.1 MGP_129S1SvImJ_G0003241.1 mouse_genomes_project 14 40055521 40057311 + Gm15222 antisense antisense MGP_129S1SvImJ_T0098829.1 MGP_129S1SvImJ_G0036910.1 mouse_genomes_project 14 40669939 40676952 + sense_intronic sense_intronic MGP_129S1SvImJ_T0006737.1 MGP_129S1SvImJ_G0005569.1 mouse_genomes_project 14 72485911 72514193 - Gm6994 lincRNA lincRNA MGP_129S1SvImJ_T0006738.1 MGP_129S1SvImJ_G0005569.1 mouse_genomes_project 14 72486535 72508751 - Gm6994 lincRNA lincRNA MGP_129S1SvImJ_T0098492.1 MGP_129S1SvImJ_G0036577.1 mouse_genomes_project 14 4842595 4842705 - n-R5s45 rRNA rRNA MGP_129S1SvImJ_T0040344.1 MGP_129S1SvImJ_G0021645.1 mouse_genomes_project 14 114441570 115535212 + MGP_129S1SvImJ_P0040344 Gpc6 protein_coding protein_coding MGP_129S1SvImJ_T0040345.1 MGP_129S1SvImJ_G0021645.1 mouse_genomes_project 14 114441588 115155838 + Gpc6 protein_coding retained_intron MGP_129S1SvImJ_T0040346.1 MGP_129S1SvImJ_G0021645.1 mouse_genomes_project 14 114441703 115532396 + MGP_129S1SvImJ_P0040346 Gpc6 protein_coding protein_coding MGP_129S1SvImJ_T0040347.1 MGP_129S1SvImJ_G0021645.1 mouse_genomes_project 14 114441804 115531251 + MGP_129S1SvImJ_P0040347 Gpc6 protein_coding protein_coding MGP_129S1SvImJ_T0039027.1 MGP_129S1SvImJ_G0021207.1 mouse_genomes_project 14 38951118 38970853 + MGP_129S1SvImJ_P0039027 Psmc6 protein_coding protein_coding MGP_129S1SvImJ_T0039862.1 MGP_129S1SvImJ_G0021474.1 mouse_genomes_project 14 59391301 59531605 - MGP_129S1SvImJ_P0039862 Hmbox1 protein_coding protein_coding MGP_129S1SvImJ_T0039863.1 MGP_129S1SvImJ_G0021474.1 mouse_genomes_project 14 59394328 59401979 - Hmbox1 protein_coding processed_transcript MGP_129S1SvImJ_T0039864.1 MGP_129S1SvImJ_G0021474.1 mouse_genomes_project 14 59401900 59531626 - MGP_129S1SvImJ_P0039864 Hmbox1 protein_coding protein_coding MGP_129S1SvImJ_T0039865.1 MGP_129S1SvImJ_G0021474.1 mouse_genomes_project 14 59401900 59531602 - MGP_129S1SvImJ_P0039865 Hmbox1 protein_coding protein_coding MGP_129S1SvImJ_T0039866.1 MGP_129S1SvImJ_G0021474.1 mouse_genomes_project 14 59402496 59531387 - MGP_129S1SvImJ_P0039866 Hmbox1 protein_coding protein_coding MGP_129S1SvImJ_T0039867.1 MGP_129S1SvImJ_G0021474.1 mouse_genomes_project 14 59402851 59484238 - MGP_129S1SvImJ_P0039867 Hmbox1 protein_coding protein_coding MGP_129S1SvImJ_T0039868.1 MGP_129S1SvImJ_G0021474.1 mouse_genomes_project 14 59404741 59531611 - MGP_129S1SvImJ_P0039868 Hmbox1 protein_coding protein_coding MGP_129S1SvImJ_T0039869.1 MGP_129S1SvImJ_G0021474.1 mouse_genomes_project 14 59404988 59531602 - MGP_129S1SvImJ_P0039869 Hmbox1 protein_coding protein_coding MGP_129S1SvImJ_T0039870.1 MGP_129S1SvImJ_G0021474.1 mouse_genomes_project 14 59405021 59531602 - MGP_129S1SvImJ_P0039870 Hmbox1 protein_coding protein_coding MGP_129S1SvImJ_T0039871.1 MGP_129S1SvImJ_G0021474.1 mouse_genomes_project 14 59464727 59531602 - Hmbox1 protein_coding retained_intron MGP_129S1SvImJ_T0006699.1 MGP_129S1SvImJ_G0005542.1 mouse_genomes_project 14 42531522 42665256 + Otx2os1 lincRNA lincRNA MGP_129S1SvImJ_T0006700.1 MGP_129S1SvImJ_G0005542.1 mouse_genomes_project 14 42532393 42587234 + Otx2os1 lincRNA lincRNA MGP_129S1SvImJ_T0006701.1 MGP_129S1SvImJ_G0005542.1 mouse_genomes_project 14 42532498 42583635 + Otx2os1 lincRNA lincRNA MGP_129S1SvImJ_T0039012.1 MGP_129S1SvImJ_G0021203.1 mouse_genomes_project 14 38592925 38615369 + MGP_129S1SvImJ_P0039012 Ptger2 protein_coding protein_coding MGP_129S1SvImJ_T0003611.1 MGP_129S1SvImJ_G0003273.1 mouse_genomes_project 14 120128446 120133563 - 1700108J01Rik antisense antisense MGP_129S1SvImJ_T0002554.1 MGP_129S1SvImJ_G0002457.1 mouse_genomes_project 14 48113764 48113821 + MGP_129S1SvImJ_P0002554 Traj33 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0039655.1 MGP_129S1SvImJ_G0021387.1 mouse_genomes_project 14 50237260 50240258 - MGP_129S1SvImJ_P0039655 Gzmg protein_coding protein_coding MGP_129S1SvImJ_T0010026.1 MGP_129S1SvImJ_G0008142.1 mouse_genomes_project 14 73289200 73289309 - Gm23652 miRNA miRNA MGP_129S1SvImJ_T0017434.1 MGP_129S1SvImJ_G0015274.1 mouse_genomes_project 14 62054948 62123945 - 4930438E09Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0040229.1 MGP_129S1SvImJ_G0021605.1 mouse_genomes_project 14 75172396 75195348 + MGP_129S1SvImJ_P0040229 Olfm4 protein_coding protein_coding MGP_129S1SvImJ_T0040230.1 MGP_129S1SvImJ_G0021605.1 mouse_genomes_project 14 75172419 75195348 + MGP_129S1SvImJ_P0040230 Olfm4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0099393.1 MGP_129S1SvImJ_G0037460.1 mouse_genomes_project 14 42514602 42514706 + Gm23469 snRNA snRNA MGP_129S1SvImJ_T0101632.1 MGP_129S1SvImJ_G0039669.1 mouse_genomes_project 14 53162401 53162884 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101633.1 MGP_129S1SvImJ_G0039669.1 mouse_genomes_project 14 53162805 53163797 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0038867.1 MGP_129S1SvImJ_G0021142.1 mouse_genomes_project 14 25436312 25480942 + Parg protein_coding retained_intron MGP_129S1SvImJ_T0038868.1 MGP_129S1SvImJ_G0021142.1 mouse_genomes_project 14 25436312 25537124 + MGP_129S1SvImJ_P0038868 Parg protein_coding protein_coding MGP_129S1SvImJ_T0038869.1 MGP_129S1SvImJ_G0021142.1 mouse_genomes_project 14 25436312 25537454 + MGP_129S1SvImJ_P0038869 Parg protein_coding protein_coding MGP_129S1SvImJ_T0038870.1 MGP_129S1SvImJ_G0021142.1 mouse_genomes_project 14 25436312 25535565 + MGP_129S1SvImJ_P0038870 Parg protein_coding protein_coding MGP_129S1SvImJ_T0038871.1 MGP_129S1SvImJ_G0021142.1 mouse_genomes_project 14 25436334 25443805 + MGP_129S1SvImJ_P0038871 Parg protein_coding protein_coding MGP_129S1SvImJ_T0038872.1 MGP_129S1SvImJ_G0021142.1 mouse_genomes_project 14 25436396 25537124 + MGP_129S1SvImJ_P0038872 Parg protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038873.1 MGP_129S1SvImJ_G0021142.1 mouse_genomes_project 14 25436800 25443756 + Parg protein_coding processed_transcript MGP_129S1SvImJ_T0038874.1 MGP_129S1SvImJ_G0021142.1 mouse_genomes_project 14 25449018 25480107 + MGP_129S1SvImJ_P0038874 Parg protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038875.1 MGP_129S1SvImJ_G0021142.1 mouse_genomes_project 14 25480014 25502694 + Parg protein_coding processed_transcript MGP_129S1SvImJ_T0038876.1 MGP_129S1SvImJ_G0021142.1 mouse_genomes_project 14 25515629 25536248 + Parg protein_coding processed_transcript MGP_129S1SvImJ_T0038664.1 MGP_129S1SvImJ_G0021104.1 mouse_genomes_project 14 23673955 23674733 + protein_coding processed_transcript MGP_129S1SvImJ_T0038665.1 MGP_129S1SvImJ_G0021104.1 mouse_genomes_project 14 23674128 23699090 + MGP_129S1SvImJ_P0038665 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0038666.1 MGP_129S1SvImJ_G0021104.1 mouse_genomes_project 14 23674777 23687994 + protein_coding retained_intron MGP_129S1SvImJ_T0038667.1 MGP_129S1SvImJ_G0021104.1 mouse_genomes_project 14 23674807 23686200 + MGP_129S1SvImJ_P0038667 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038668.1 MGP_129S1SvImJ_G0021104.1 mouse_genomes_project 14 23695282 23696598 + protein_coding retained_intron MGP_129S1SvImJ_T0013065.1 MGP_129S1SvImJ_G0011154.1 mouse_genomes_project 14 120412944 120413583 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003604.1 MGP_129S1SvImJ_G0003269.1 mouse_genomes_project 14 70706597 70709947 - antisense antisense MGP_129S1SvImJ_T0012985.1 MGP_129S1SvImJ_G0011074.1 mouse_genomes_project 14 10705858 10706736 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011399.1 MGP_129S1SvImJ_G0009515.1 mouse_genomes_project 14 59804095 59804171 - Gm27263 misc_RNA misc_RNA MGP_129S1SvImJ_T0006711.1 MGP_129S1SvImJ_G0005549.1 mouse_genomes_project 14 46229791 46246382 + Gm26590 lincRNA lincRNA MGP_129S1SvImJ_T0098499.1 MGP_129S1SvImJ_G0036584.1 mouse_genomes_project 14 72538908 72539018 + n-R5s48 rRNA rRNA MGP_129S1SvImJ_T0039934.1 MGP_129S1SvImJ_G0021498.1 mouse_genomes_project 14 61503885 61572747 - MGP_129S1SvImJ_P0039934 Dpysl2 protein_coding protein_coding MGP_129S1SvImJ_T0100716.1 MGP_129S1SvImJ_G0038783.1 mouse_genomes_project 14 106781110 106781240 - Gm25901 snoRNA snoRNA MGP_129S1SvImJ_T0040191.1 MGP_129S1SvImJ_G0021586.1 mouse_genomes_project 14 72840687 72896376 - MGP_129S1SvImJ_P0040191 Dnajc15 protein_coding protein_coding MGP_129S1SvImJ_T0038704.1 MGP_129S1SvImJ_G0021111.1 mouse_genomes_project 14 24060788 24077736 - MGP_129S1SvImJ_P0038704 Itih3 protein_coding protein_coding MGP_129S1SvImJ_T0038705.1 MGP_129S1SvImJ_G0021111.1 mouse_genomes_project 14 24060791 24077563 - Itih3 protein_coding retained_intron MGP_129S1SvImJ_T0038706.1 MGP_129S1SvImJ_G0021111.1 mouse_genomes_project 14 24060898 24077525 - MGP_129S1SvImJ_P0038706 Itih3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0038707.1 MGP_129S1SvImJ_G0021111.1 mouse_genomes_project 14 24060898 24077525 - MGP_129S1SvImJ_P0038707 Itih3 protein_coding protein_coding MGP_129S1SvImJ_T0038708.1 MGP_129S1SvImJ_G0021111.1 mouse_genomes_project 14 24062055 24067603 - MGP_129S1SvImJ_P0038708 Itih3 protein_coding protein_coding MGP_129S1SvImJ_T0038709.1 MGP_129S1SvImJ_G0021111.1 mouse_genomes_project 14 24064173 24066345 - Itih3 protein_coding retained_intron MGP_129S1SvImJ_T0039214.1 MGP_129S1SvImJ_G0021268.1 mouse_genomes_project 14 44996992 44997705 - MGP_129S1SvImJ_P0039214 Rnase11 protein_coding protein_coding MGP_129S1SvImJ_T0040045.1 MGP_129S1SvImJ_G0021539.1 mouse_genomes_project 14 65126662 65173840 - MGP_129S1SvImJ_P0040045 Bmp1 protein_coding protein_coding MGP_129S1SvImJ_T0040072.1 MGP_129S1SvImJ_G0021552.1 mouse_genomes_project 14 67265397 67424729 - MGP_129S1SvImJ_P0040072 Fndc3a protein_coding protein_coding MGP_129S1SvImJ_T0040073.1 MGP_129S1SvImJ_G0021552.1 mouse_genomes_project 14 67266988 67338918 - MGP_129S1SvImJ_P0040073 Fndc3a protein_coding protein_coding MGP_129S1SvImJ_T0040074.1 MGP_129S1SvImJ_G0021552.1 mouse_genomes_project 14 67288924 67292250 - Fndc3a protein_coding retained_intron MGP_129S1SvImJ_T0040075.1 MGP_129S1SvImJ_G0021552.1 mouse_genomes_project 14 67292273 67450269 - MGP_129S1SvImJ_P0040075 Fndc3a protein_coding protein_coding MGP_129S1SvImJ_T0040076.1 MGP_129S1SvImJ_G0021552.1 mouse_genomes_project 14 67302476 67385170 - MGP_129S1SvImJ_P0040076 Fndc3a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040077.1 MGP_129S1SvImJ_G0021552.1 mouse_genomes_project 14 67334330 67450724 - Fndc3a protein_coding retained_intron MGP_129S1SvImJ_T0040078.1 MGP_129S1SvImJ_G0021552.1 mouse_genomes_project 14 67382341 67450570 - Fndc3a protein_coding retained_intron MGP_129S1SvImJ_T0038966.1 MGP_129S1SvImJ_G0021182.1 mouse_genomes_project 14 29515485 29517463 + MGP_129S1SvImJ_P0038966 4930474N05Rik protein_coding protein_coding MGP_129S1SvImJ_T0038967.1 MGP_129S1SvImJ_G0021182.1 mouse_genomes_project 14 29515535 29521167 + MGP_129S1SvImJ_P0038967 4930474N05Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0013060.1 MGP_129S1SvImJ_G0011149.1 mouse_genomes_project 14 105474456 105474906 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038353.1 MGP_129S1SvImJ_G0021014.1 mouse_genomes_project 14 8860978 8873274 - MGP_129S1SvImJ_P0038353 Oxsm protein_coding protein_coding MGP_129S1SvImJ_T0038354.1 MGP_129S1SvImJ_G0021014.1 mouse_genomes_project 14 8863567 8866811 - MGP_129S1SvImJ_P0038354 Oxsm protein_coding protein_coding MGP_129S1SvImJ_T0038355.1 MGP_129S1SvImJ_G0021014.1 mouse_genomes_project 14 8864117 8872642 - MGP_129S1SvImJ_P0038355 Oxsm protein_coding protein_coding MGP_129S1SvImJ_T0038356.1 MGP_129S1SvImJ_G0021014.1 mouse_genomes_project 14 8865652 8872640 - MGP_129S1SvImJ_P0038356 Oxsm protein_coding protein_coding MGP_129S1SvImJ_T0011393.1 MGP_129S1SvImJ_G0009509.1 mouse_genomes_project 14 48050763 48051103 + Gm23704 misc_RNA misc_RNA MGP_129S1SvImJ_T0039965.1 MGP_129S1SvImJ_G0021506.1 mouse_genomes_project 14 62490263 62494460 + MGP_129S1SvImJ_P0039965 Gnrh1 protein_coding protein_coding MGP_129S1SvImJ_T0039904.1 MGP_129S1SvImJ_G0021489.1 mouse_genomes_project 14 60629017 60650950 - MGP_129S1SvImJ_P0039904 Gulo protein_coding protein_coding MGP_129S1SvImJ_T0040234.1 MGP_129S1SvImJ_G0021608.1 mouse_genomes_project 14 82903126 83013078 + MGP_129S1SvImJ_P0040234 Tdrd3 protein_coding protein_coding MGP_129S1SvImJ_T0040235.1 MGP_129S1SvImJ_G0021608.1 mouse_genomes_project 14 82903126 83046155 + MGP_129S1SvImJ_P0040235 Tdrd3 protein_coding protein_coding MGP_129S1SvImJ_T0040236.1 MGP_129S1SvImJ_G0021608.1 mouse_genomes_project 14 82903153 83046168 + MGP_129S1SvImJ_P0040236 Tdrd3 protein_coding protein_coding MGP_129S1SvImJ_T0040237.1 MGP_129S1SvImJ_G0021608.1 mouse_genomes_project 14 82951773 82975427 + MGP_129S1SvImJ_P0040237 Tdrd3 protein_coding protein_coding MGP_129S1SvImJ_T0040238.1 MGP_129S1SvImJ_G0021608.1 mouse_genomes_project 14 82966403 82982190 + MGP_129S1SvImJ_P0040238 Tdrd3 protein_coding protein_coding MGP_129S1SvImJ_T0039977.1 MGP_129S1SvImJ_G0021515.1 mouse_genomes_project 14 63959557 63963601 + MGP_129S1SvImJ_P0039977 Nkx3-1 protein_coding protein_coding MGP_129S1SvImJ_T0017429.1 MGP_129S1SvImJ_G0015271.1 mouse_genomes_project 14 60968168 60969961 - 1700001G11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017430.1 MGP_129S1SvImJ_G0015271.1 mouse_genomes_project 14 60968169 60969772 - 1700001G11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017431.1 MGP_129S1SvImJ_G0015271.1 mouse_genomes_project 14 60968329 60969715 - 1700001G11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0039466.1 MGP_129S1SvImJ_G0021330.1 mouse_genomes_project 14 48888454 48894878 - MGP_129S1SvImJ_P0039466 Slc22a17 protein_coding protein_coding MGP_129S1SvImJ_T0006745.1 MGP_129S1SvImJ_G0005575.1 mouse_genomes_project 14 115951179 115972082 + Gm26791 lincRNA lincRNA MGP_129S1SvImJ_T0040259.1 MGP_129S1SvImJ_G0021619.1 mouse_genomes_project 14 96211600 96496081 - MGP_129S1SvImJ_P0040259 Klf12 protein_coding protein_coding MGP_129S1SvImJ_T0010027.1 MGP_129S1SvImJ_G0008143.1 mouse_genomes_project 14 74885679 74885777 + Mir759 miRNA miRNA MGP_129S1SvImJ_T0038660.1 MGP_129S1SvImJ_G0021102.1 mouse_genomes_project 14 23144638 23476716 - MGP_129S1SvImJ_P0038660 Cacna1d protein_coding protein_coding MGP_129S1SvImJ_T0038661.1 MGP_129S1SvImJ_G0021102.1 mouse_genomes_project 14 23144638 23617330 - MGP_129S1SvImJ_P0038661 Cacna1d protein_coding protein_coding MGP_129S1SvImJ_T0038662.1 MGP_129S1SvImJ_G0021102.1 mouse_genomes_project 14 23146762 23476352 - MGP_129S1SvImJ_P0038662 Cacna1d protein_coding unknown_likely_coding MGP_129S1SvImJ_T0038657.1 MGP_129S1SvImJ_G0021101.1 mouse_genomes_project 14 23113683 23145156 + MGP_129S1SvImJ_P0038657 Chdh protein_coding protein_coding MGP_129S1SvImJ_T0038658.1 MGP_129S1SvImJ_G0021101.1 mouse_genomes_project 14 23113831 23131864 + Chdh protein_coding processed_transcript MGP_129S1SvImJ_T0038659.1 MGP_129S1SvImJ_G0021101.1 mouse_genomes_project 14 23127293 23142937 + MGP_129S1SvImJ_P0038659 Chdh protein_coding protein_coding MGP_129S1SvImJ_T0038882.1 MGP_129S1SvImJ_G0021147.1 mouse_genomes_project 14 25767576 25831113 + MGP_129S1SvImJ_P0038882 Ercc6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040351.1 MGP_129S1SvImJ_G0021649.1 mouse_genomes_project 14 115807732 115811531 - MGP_129S1SvImJ_P0040351 Sox21 protein_coding protein_coding MGP_129S1SvImJ_T0013061.1 MGP_129S1SvImJ_G0011150.1 mouse_genomes_project 14 109776722 109777202 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002534.1 MGP_129S1SvImJ_G0002439.1 mouse_genomes_project 14 48090684 48090750 + MGP_129S1SvImJ_P0002534 Traj53 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0039650.1 MGP_129S1SvImJ_G0021382.1 mouse_genomes_project 14 50136553 50139055 - MGP_129S1SvImJ_P0039650 Cma2 protein_coding protein_coding MGP_129S1SvImJ_T0006741.1 MGP_129S1SvImJ_G0005572.1 mouse_genomes_project 14 103000975 103065058 - 1700128A07Rik lincRNA lincRNA MGP_129S1SvImJ_T0006742.1 MGP_129S1SvImJ_G0005572.1 mouse_genomes_project 14 103021829 103065030 - 1700128A07Rik lincRNA lincRNA MGP_129S1SvImJ_T0017402.1 MGP_129S1SvImJ_G0015265.1 mouse_genomes_project 14 48609 108668 - Gm10044 processed_transcript antisense MGP_129S1SvImJ_T0017404.1 MGP_129S1SvImJ_G0015265.1 mouse_genomes_project 14 60800 108592 - Gm10044 processed_transcript antisense MGP_129S1SvImJ_T0017405.1 MGP_129S1SvImJ_G0015265.1 mouse_genomes_project 14 69240 84668 - Gm10044 processed_transcript antisense MGP_129S1SvImJ_T0017406.1 MGP_129S1SvImJ_G0015265.1 mouse_genomes_project 14 81504 84738 - Gm10044 processed_transcript retained_intron MGP_129S1SvImJ_T0017407.1 MGP_129S1SvImJ_G0015265.1 mouse_genomes_project 14 81737 108570 - Gm10044 processed_transcript antisense MGP_129S1SvImJ_T0040403.1 MGP_129S1SvImJ_G0021672.1 mouse_genomes_project 14 120390515 120394834 + MGP_129S1SvImJ_P0040403 Zic2 protein_coding protein_coding MGP_129S1SvImJ_T0040404.1 MGP_129S1SvImJ_G0021672.1 mouse_genomes_project 14 120393081 120394032 + Zic2 protein_coding retained_intron MGP_129S1SvImJ_T0002738.1 MGP_129S1SvImJ_G0002613.1 mouse_genomes_project 14 47187354 47189445 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0039186.1 MGP_129S1SvImJ_G0021260.1 mouse_genomes_project 14 44841673 44843540 - MGP_129S1SvImJ_P0039186 Klhl33 protein_coding protein_coding MGP_129S1SvImJ_T0100718.1 MGP_129S1SvImJ_G0038785.1 mouse_genomes_project 14 116388200 116388331 + Gm22379 snoRNA snoRNA MGP_129S1SvImJ_T0100663.1 MGP_129S1SvImJ_G0038730.1 mouse_genomes_project 14 11450618 11450753 + Gm22499 snoRNA snoRNA MGP_129S1SvImJ_T0038880.1 MGP_129S1SvImJ_G0021145.1 mouse_genomes_project 14 25649999 25715760 - MGP_129S1SvImJ_P0038880 Chat protein_coding protein_coding MGP_129S1SvImJ_T0040120.1 MGP_129S1SvImJ_G0021563.1 mouse_genomes_project 14 69521035 69544714 + MGP_129S1SvImJ_P0040120 Esd protein_coding protein_coding MGP_129S1SvImJ_T0040121.1 MGP_129S1SvImJ_G0021563.1 mouse_genomes_project 14 69521038 69543674 + MGP_129S1SvImJ_P0040121 Esd protein_coding protein_coding MGP_129S1SvImJ_T0040122.1 MGP_129S1SvImJ_G0021563.1 mouse_genomes_project 14 69521057 69534915 + Esd protein_coding retained_intron MGP_129S1SvImJ_T0040123.1 MGP_129S1SvImJ_G0021563.1 mouse_genomes_project 14 69521059 69528204 + Esd protein_coding processed_transcript MGP_129S1SvImJ_T0040124.1 MGP_129S1SvImJ_G0021563.1 mouse_genomes_project 14 69521095 69537782 + MGP_129S1SvImJ_P0040124 Esd protein_coding protein_coding MGP_129S1SvImJ_T0040125.1 MGP_129S1SvImJ_G0021563.1 mouse_genomes_project 14 69521122 69543797 + MGP_129S1SvImJ_P0040125 Esd protein_coding protein_coding MGP_129S1SvImJ_T0040126.1 MGP_129S1SvImJ_G0021563.1 mouse_genomes_project 14 69524651 69543674 + MGP_129S1SvImJ_P0040126 Esd protein_coding protein_coding MGP_129S1SvImJ_T0040127.1 MGP_129S1SvImJ_G0021563.1 mouse_genomes_project 14 69527191 69535865 + Esd protein_coding retained_intron MGP_129S1SvImJ_T0040128.1 MGP_129S1SvImJ_G0021563.1 mouse_genomes_project 14 69527254 69543704 + MGP_129S1SvImJ_P0040128 Esd protein_coding protein_coding MGP_129S1SvImJ_T0038984.1 MGP_129S1SvImJ_G0021189.1 mouse_genomes_project 14 30622060 30636898 - MGP_129S1SvImJ_P0038984 Ghitm protein_coding protein_coding MGP_129S1SvImJ_T0038985.1 MGP_129S1SvImJ_G0021189.1 mouse_genomes_project 14 30622060 30637081 - MGP_129S1SvImJ_P0038985 Ghitm protein_coding protein_coding MGP_129S1SvImJ_T0017436.1 MGP_129S1SvImJ_G0015276.1 mouse_genomes_project 14 67918187 67931608 - Gm17233 processed_transcript processed_transcript MGP_129S1SvImJ_T0040255.1 MGP_129S1SvImJ_G0021615.1 mouse_genomes_project 14 95315275 95346910 + MGP_129S1SvImJ_P0040255 Bora protein_coding protein_coding MGP_129S1SvImJ_T0002638.1 MGP_129S1SvImJ_G0002530.1 mouse_genomes_project 14 46818150 46818699 + MGP_129S1SvImJ_P0002638 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0013008.1 MGP_129S1SvImJ_G0011097.1 mouse_genomes_project 14 38484193 38484977 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038285.1 MGP_129S1SvImJ_G0020989.1 mouse_genomes_project 14 502203 509228 - MGP_129S1SvImJ_P0038285 Pdhb protein_coding protein_coding MGP_129S1SvImJ_T0038367.1 MGP_129S1SvImJ_G0021018.1 mouse_genomes_project 14 10256354 10648678 + MGP_129S1SvImJ_P0038367 Thrb protein_coding protein_coding MGP_129S1SvImJ_T0038368.1 MGP_129S1SvImJ_G0021018.1 mouse_genomes_project 14 10256354 10650226 + MGP_129S1SvImJ_P0038368 Thrb protein_coding protein_coding MGP_129S1SvImJ_T0038369.1 MGP_129S1SvImJ_G0021018.1 mouse_genomes_project 14 10595626 10650224 + MGP_129S1SvImJ_P0038369 Thrb protein_coding protein_coding MGP_129S1SvImJ_T0013037.1 MGP_129S1SvImJ_G0011126.1 mouse_genomes_project 14 57635695 57636717 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039632.1 MGP_129S1SvImJ_G0021371.1 mouse_genomes_project 14 49812853 49829882 - MGP_129S1SvImJ_P0039632 Adcy4 protein_coding protein_coding MGP_129S1SvImJ_T0039633.1 MGP_129S1SvImJ_G0021371.1 mouse_genomes_project 14 49812878 49830046 - MGP_129S1SvImJ_P0039633 Adcy4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0039634.1 MGP_129S1SvImJ_G0021371.1 mouse_genomes_project 14 49812878 49830046 - MGP_129S1SvImJ_P0039634 Adcy4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0039635.1 MGP_129S1SvImJ_G0021371.1 mouse_genomes_project 14 49812888 49829859 - MGP_129S1SvImJ_P0039635 Adcy4 protein_coding protein_coding MGP_129S1SvImJ_T0003553.1 MGP_129S1SvImJ_G0003228.1 mouse_genomes_project 14 18382706 18389144 - Zmiz1os1 antisense antisense MGP_129S1SvImJ_T0099429.1 MGP_129S1SvImJ_G0037496.1 mouse_genomes_project 14 109253595 109253687 - Gm22764 snRNA snRNA MGP_129S1SvImJ_T0013050.1 MGP_129S1SvImJ_G0011139.1 mouse_genomes_project 14 92362500 92363313 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0009992.1 MGP_129S1SvImJ_G0008108.1 mouse_genomes_project 14 16994130 16994184 + Mir7210 miRNA miRNA MGP_129S1SvImJ_T0039843.1 MGP_129S1SvImJ_G0021464.1 mouse_genomes_project 14 58147382 58367584 + MGP_129S1SvImJ_P0039843 Xkr6 protein_coding protein_coding MGP_129S1SvImJ_T0039844.1 MGP_129S1SvImJ_G0021464.1 mouse_genomes_project 14 58147554 58200110 + MGP_129S1SvImJ_P0039844 Xkr6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039845.1 MGP_129S1SvImJ_G0021464.1 mouse_genomes_project 14 58147905 58196737 + MGP_129S1SvImJ_P0039845 Xkr6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039846.1 MGP_129S1SvImJ_G0021464.1 mouse_genomes_project 14 58193084 58197025 + Xkr6 protein_coding processed_transcript MGP_129S1SvImJ_T0039847.1 MGP_129S1SvImJ_G0021464.1 mouse_genomes_project 14 58335239 58366794 + MGP_129S1SvImJ_P0039847 Xkr6 protein_coding protein_coding MGP_129S1SvImJ_T0100691.1 MGP_129S1SvImJ_G0038758.1 mouse_genomes_project 14 65073932 65074042 - Gm22725 snoRNA snoRNA MGP_129S1SvImJ_T0003559.1 MGP_129S1SvImJ_G0003234.1 mouse_genomes_project 14 26666823 26670993 - Gm15512 antisense antisense MGP_129S1SvImJ_T0038991.1 MGP_129S1SvImJ_G0021192.1 mouse_genomes_project 14 34529470 34599823 - MGP_129S1SvImJ_P0038991 Tspan14 protein_coding protein_coding MGP_129S1SvImJ_T0100696.1 MGP_129S1SvImJ_G0038763.1 mouse_genomes_project 14 82839697 82839840 + Gm23278 snoRNA snoRNA MGP_129S1SvImJ_T0040319.1 MGP_129S1SvImJ_G0021634.1 mouse_genomes_project 14 101022184 101029682 - MGP_129S1SvImJ_P0040319 Pou4f1 protein_coding protein_coding MGP_129S1SvImJ_T0040320.1 MGP_129S1SvImJ_G0021634.1 mouse_genomes_project 14 101024449 101025860 - Pou4f1 protein_coding processed_transcript MGP_129S1SvImJ_T0003547.1 MGP_129S1SvImJ_G0003225.1 mouse_genomes_project 14 14583571 14588381 + Gm15935 antisense antisense MGP_129S1SvImJ_T0003548.1 MGP_129S1SvImJ_G0003225.1 mouse_genomes_project 14 14583593 14588676 + Gm15935 antisense antisense MGP_129S1SvImJ_T0003549.1 MGP_129S1SvImJ_G0003225.1 mouse_genomes_project 14 14583617 14588127 + Gm15935 antisense antisense MGP_129S1SvImJ_T0038920.1 MGP_129S1SvImJ_G0021158.1 mouse_genomes_project 14 26901669 26953224 + MGP_129S1SvImJ_P0038920 Ptpn20 protein_coding protein_coding MGP_129S1SvImJ_T0000951.1 MGP_129S1SvImJ_G0000883.1 mouse_genomes_project 14 88346724 88347095 + TEC TEC MGP_129S1SvImJ_T0013007.1 MGP_129S1SvImJ_G0011096.1 mouse_genomes_project 14 34188614 34189617 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006725.1 MGP_129S1SvImJ_G0005561.1 mouse_genomes_project 14 57302909 57304209 - Gm26536 lincRNA lincRNA MGP_129S1SvImJ_T0002568.1 MGP_129S1SvImJ_G0002471.1 mouse_genomes_project 14 48128658 48128719 + MGP_129S1SvImJ_P0002568 Traj19 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0002556.1 MGP_129S1SvImJ_G0002459.1 mouse_genomes_project 14 48116242 48116299 + MGP_129S1SvImJ_P0002556 Traj31 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0002648.1 MGP_129S1SvImJ_G0002540.1 mouse_genomes_project 14 47001575 47002152 + MGP_129S1SvImJ_P0002648 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0039167.1 MGP_129S1SvImJ_G0021244.1 mouse_genomes_project 14 44252745 44253696 - Olfr735 protein_coding transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0039168.1 MGP_129S1SvImJ_G0021244.1 mouse_genomes_project 14 44252745 44253810 - MGP_129S1SvImJ_P0039168 Olfr735 protein_coding protein_coding MGP_129S1SvImJ_T0039169.1 MGP_129S1SvImJ_G0021244.1 mouse_genomes_project 14 44253148 44257321 - Olfr735 protein_coding processed_transcript MGP_129S1SvImJ_T0010007.1 MGP_129S1SvImJ_G0008123.1 mouse_genomes_project 14 48962574 48962651 - Mir208b miRNA miRNA MGP_129S1SvImJ_T0040327.1 MGP_129S1SvImJ_G0021637.1 mouse_genomes_project 14 101838015 101891209 + MGP_129S1SvImJ_P0040327 Ndfip2 protein_coding protein_coding MGP_129S1SvImJ_T0040328.1 MGP_129S1SvImJ_G0021637.1 mouse_genomes_project 14 101838160 101891215 + MGP_129S1SvImJ_P0040328 Ndfip2 protein_coding protein_coding MGP_129S1SvImJ_T0040329.1 MGP_129S1SvImJ_G0021637.1 mouse_genomes_project 14 101838260 101874608 + Ndfip2 protein_coding retained_intron MGP_129S1SvImJ_T0040330.1 MGP_129S1SvImJ_G0021637.1 mouse_genomes_project 14 101871946 101890782 + Ndfip2 protein_coding retained_intron MGP_129S1SvImJ_T0040331.1 MGP_129S1SvImJ_G0021637.1 mouse_genomes_project 14 101872342 101890716 + Ndfip2 protein_coding retained_intron MGP_129S1SvImJ_T0040332.1 MGP_129S1SvImJ_G0021637.1 mouse_genomes_project 14 101874207 101890782 + Ndfip2 protein_coding processed_transcript MGP_129S1SvImJ_T0039814.1 MGP_129S1SvImJ_G0021452.1 mouse_genomes_project 14 57476795 57479744 + MGP_129S1SvImJ_P0039814 Defb47 protein_coding protein_coding MGP_129S1SvImJ_T0039478.1 MGP_129S1SvImJ_G0021336.1 mouse_genomes_project 14 48963795 48963886 + MGP_129S1SvImJ_P0039478 Gm17428 protein_coding protein_coding MGP_129S1SvImJ_T0010019.1 MGP_129S1SvImJ_G0008135.1 mouse_genomes_project 14 61997012 61997107 - Gm23178 miRNA miRNA MGP_129S1SvImJ_T0040215.1 MGP_129S1SvImJ_G0021599.1 mouse_genomes_project 14 74589271 74611156 - MGP_129S1SvImJ_P0040215 Wbp4 protein_coding protein_coding MGP_129S1SvImJ_T0099431.1 MGP_129S1SvImJ_G0037498.1 mouse_genomes_project 14 116186466 116186566 + Gm23302 snRNA snRNA MGP_129S1SvImJ_T0040181.1 MGP_129S1SvImJ_G0021581.1 mouse_genomes_project 14 71472185 71496170 - MGP_129S1SvImJ_P0040181 Serp2 protein_coding protein_coding MGP_129S1SvImJ_T0009996.1 MGP_129S1SvImJ_G0008112.1 mouse_genomes_project 14 20394832 20394951 - Gm23633 miRNA miRNA MGP_129S1SvImJ_T0100690.1 MGP_129S1SvImJ_G0038757.1 mouse_genomes_project 14 62923365 62923487 - Gm22319 snoRNA snoRNA MGP_129S1SvImJ_T0100692.1 MGP_129S1SvImJ_G0038759.1 mouse_genomes_project 14 70712736 70712866 + Snora31 snoRNA snoRNA MGP_129S1SvImJ_T0039222.1 MGP_129S1SvImJ_G0021274.1 mouse_genomes_project 14 45101800 45103855 + MGP_129S1SvImJ_P0039222 Rnase6 protein_coding protein_coding MGP_129S1SvImJ_T0002745.1 MGP_129S1SvImJ_G0002620.1 mouse_genomes_project 14 47788045 47788597 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0002570.1 MGP_129S1SvImJ_G0002473.1 mouse_genomes_project 14 48130051 48130114 + MGP_129S1SvImJ_P0002570 Traj17 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0039047.1 MGP_129S1SvImJ_G0021212.1 mouse_genomes_project 14 40049811 40058693 - MGP_129S1SvImJ_P0039047 Bmp4 protein_coding protein_coding MGP_129S1SvImJ_T0039048.1 MGP_129S1SvImJ_G0021212.1 mouse_genomes_project 14 40049997 40058574 - MGP_129S1SvImJ_P0039048 Bmp4 protein_coding protein_coding MGP_129S1SvImJ_T0039049.1 MGP_129S1SvImJ_G0021212.1 mouse_genomes_project 14 40054998 40058559 - Bmp4 protein_coding retained_intron MGP_129S1SvImJ_T0039409.1 MGP_129S1SvImJ_G0021313.1 mouse_genomes_project 14 48492432 48512297 - MGP_129S1SvImJ_P0039409 Haus4 protein_coding protein_coding MGP_129S1SvImJ_T0038529.1 MGP_129S1SvImJ_G0021061.1 mouse_genomes_project 14 17043489 17167219 - MGP_129S1SvImJ_P0038529 Dlg5 protein_coding protein_coding MGP_129S1SvImJ_T0038530.1 MGP_129S1SvImJ_G0021061.1 mouse_genomes_project 14 17043489 17055723 - MGP_129S1SvImJ_P0038530 Dlg5 protein_coding protein_coding MGP_129S1SvImJ_T0038531.1 MGP_129S1SvImJ_G0021061.1 mouse_genomes_project 14 17043489 17091089 - MGP_129S1SvImJ_P0038531 Dlg5 protein_coding protein_coding MGP_129S1SvImJ_T0038532.1 MGP_129S1SvImJ_G0021061.1 mouse_genomes_project 14 17043491 17167219 - MGP_129S1SvImJ_P0038532 Dlg5 protein_coding protein_coding MGP_129S1SvImJ_T0038533.1 MGP_129S1SvImJ_G0021061.1 mouse_genomes_project 14 17053918 17061875 - MGP_129S1SvImJ_P0038533 Dlg5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038534.1 MGP_129S1SvImJ_G0021061.1 mouse_genomes_project 14 17055815 17058299 - Dlg5 protein_coding retained_intron MGP_129S1SvImJ_T0038535.1 MGP_129S1SvImJ_G0021061.1 mouse_genomes_project 14 17065636 17068582 - Dlg5 protein_coding retained_intron MGP_129S1SvImJ_T0038536.1 MGP_129S1SvImJ_G0021061.1 mouse_genomes_project 14 17104880 17166164 - MGP_129S1SvImJ_P0038536 Dlg5 protein_coding protein_coding MGP_129S1SvImJ_T0039651.1 MGP_129S1SvImJ_G0021383.1 mouse_genomes_project 14 50149865 50152911 - MGP_129S1SvImJ_P0039651 Mcpt8 protein_coding protein_coding MGP_129S1SvImJ_T0039757.1 MGP_129S1SvImJ_G0021427.1 mouse_genomes_project 14 53941208 53947586 + MGP_129S1SvImJ_P0039757 Shisa2 protein_coding protein_coding MGP_129S1SvImJ_T0038931.1 MGP_129S1SvImJ_G0021168.1 mouse_genomes_project 14 27536920 27544082 - MGP_129S1SvImJ_P0038931 Gprin2 protein_coding protein_coding MGP_129S1SvImJ_T0013020.1 MGP_129S1SvImJ_G0011109.1 mouse_genomes_project 14 46698351 46698576 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102242.1 MGP_129S1SvImJ_G0040076.1 mouse_genomes_project 14 45181932 45182396 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0100715.1 MGP_129S1SvImJ_G0038782.1 mouse_genomes_project 14 105402973 105403091 + Gm24229 snoRNA snoRNA MGP_129S1SvImJ_T0039753.1 MGP_129S1SvImJ_G0021426.1 mouse_genomes_project 14 53876426 53912769 - MGP_129S1SvImJ_P0039753 Cdadc1 protein_coding protein_coding MGP_129S1SvImJ_T0039754.1 MGP_129S1SvImJ_G0021426.1 mouse_genomes_project 14 53876426 53912769 - MGP_129S1SvImJ_P0039754 Cdadc1 protein_coding protein_coding MGP_129S1SvImJ_T0039755.1 MGP_129S1SvImJ_G0021426.1 mouse_genomes_project 14 53880028 53912769 - MGP_129S1SvImJ_P0039755 Cdadc1 protein_coding protein_coding MGP_129S1SvImJ_T0039756.1 MGP_129S1SvImJ_G0021426.1 mouse_genomes_project 14 53883266 53912769 - MGP_129S1SvImJ_P0039756 Cdadc1 protein_coding protein_coding MGP_129S1SvImJ_T0038943.1 MGP_129S1SvImJ_G0021174.1 mouse_genomes_project 14 27733738 27757210 + MGP_129S1SvImJ_P0038943 Mmrn2 protein_coding protein_coding MGP_129S1SvImJ_T0000953.1 MGP_129S1SvImJ_G0000885.1 mouse_genomes_project 14 100474006 100475722 + TEC TEC MGP_129S1SvImJ_T0013025.1 MGP_129S1SvImJ_G0011114.1 mouse_genomes_project 14 50084044 50084801 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039356.1 MGP_129S1SvImJ_G0021301.1 mouse_genomes_project 14 46535526 46540260 - MGP_129S1SvImJ_P0039356 Olfr1508 protein_coding protein_coding MGP_129S1SvImJ_T0039357.1 MGP_129S1SvImJ_G0021301.1 mouse_genomes_project 14 46535880 46540294 - MGP_129S1SvImJ_P0039357 Olfr1508 protein_coding protein_coding MGP_129S1SvImJ_T0039358.1 MGP_129S1SvImJ_G0021301.1 mouse_genomes_project 14 46536348 46539889 - MGP_129S1SvImJ_P0039358 Olfr1508 protein_coding protein_coding MGP_129S1SvImJ_T0100678.1 MGP_129S1SvImJ_G0038745.1 mouse_genomes_project 14 46311216 46311306 + Gm23758 snoRNA snoRNA MGP_129S1SvImJ_T0038809.1 MGP_129S1SvImJ_G0021132.1 mouse_genomes_project 14 24743220 24835477 - MGP_129S1SvImJ_P0038809 Hacl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038813.1 MGP_129S1SvImJ_G0021132.1 mouse_genomes_project 14 24790690 24835543 - MGP_129S1SvImJ_P0038813 Hacl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038814.1 MGP_129S1SvImJ_G0021132.1 mouse_genomes_project 14 24799254 24835563 - MGP_129S1SvImJ_P0038814 Hacl1 protein_coding protein_coding MGP_129S1SvImJ_T0038815.1 MGP_129S1SvImJ_G0021132.1 mouse_genomes_project 14 24799728 24806249 - Hacl1 protein_coding processed_transcript MGP_129S1SvImJ_T0038816.1 MGP_129S1SvImJ_G0021132.1 mouse_genomes_project 14 24800032 24802270 - Hacl1 protein_coding processed_transcript MGP_129S1SvImJ_T0038817.1 MGP_129S1SvImJ_G0021132.1 mouse_genomes_project 14 24800074 24835477 - MGP_129S1SvImJ_P0038817 Hacl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038818.1 MGP_129S1SvImJ_G0021132.1 mouse_genomes_project 14 24800074 24835477 - MGP_129S1SvImJ_P0038818 Hacl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038819.1 MGP_129S1SvImJ_G0021132.1 mouse_genomes_project 14 24800074 24835511 - MGP_129S1SvImJ_P0038819 Hacl1 protein_coding protein_coding MGP_129S1SvImJ_T0038820.1 MGP_129S1SvImJ_G0021132.1 mouse_genomes_project 14 24800074 24835477 - MGP_129S1SvImJ_P0038820 Hacl1 protein_coding protein_coding MGP_129S1SvImJ_T0038821.1 MGP_129S1SvImJ_G0021132.1 mouse_genomes_project 14 24819518 24835771 - MGP_129S1SvImJ_P0038821 Hacl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038822.1 MGP_129S1SvImJ_G0021132.1 mouse_genomes_project 14 24822855 24835856 - MGP_129S1SvImJ_P0038822 Hacl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038823.1 MGP_129S1SvImJ_G0021132.1 mouse_genomes_project 14 24823667 24835545 - Hacl1 protein_coding retained_intron MGP_129S1SvImJ_T0038824.1 MGP_129S1SvImJ_G0021132.1 mouse_genomes_project 14 24828590 24835510 - Hacl1 protein_coding retained_intron MGP_129S1SvImJ_T0038825.1 MGP_129S1SvImJ_G0021132.1 mouse_genomes_project 14 24828729 24835885 - Hacl1 protein_coding retained_intron MGP_129S1SvImJ_T0013052.1 MGP_129S1SvImJ_G0011141.1 mouse_genomes_project 14 94973847 94974787 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102246.1 MGP_129S1SvImJ_G0040080.1 mouse_genomes_project 14 45826934 45827405 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0012990.1 MGP_129S1SvImJ_G0011079.1 mouse_genomes_project 14 11744879 11755560 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039778.1 MGP_129S1SvImJ_G0021434.1 mouse_genomes_project 14 55114144 55127210 + MGP_129S1SvImJ_P0039778 C1qtnf9 protein_coding protein_coding MGP_129S1SvImJ_T0039175.1 MGP_129S1SvImJ_G0021249.1 mouse_genomes_project 14 44342370 44343300 + MGP_129S1SvImJ_P0039175 protein_coding protein_coding MGP_129S1SvImJ_T0038301.1 MGP_129S1SvImJ_G0020994.1 mouse_genomes_project 14 776395 1016128 - MGP_129S1SvImJ_P0038301 4930452B06Rik protein_coding protein_coding MGP_129S1SvImJ_T0040256.1 MGP_129S1SvImJ_G0021616.1 mouse_genomes_project 14 95349006 95372137 - MGP_129S1SvImJ_P0040256 Dis3 protein_coding protein_coding MGP_129S1SvImJ_T0038310.1 MGP_129S1SvImJ_G0020996.1 mouse_genomes_project 14 3585671 3586111 + MGP_129S1SvImJ_P0038310 Rpl21-ps4 protein_coding protein_coding MGP_129S1SvImJ_T0002512.1 MGP_129S1SvImJ_G0002421.1 mouse_genomes_project 14 48069780 48075730 + MGP_129S1SvImJ_P0002512 Trdc TR_C_gene TR_C_gene MGP_129S1SvImJ_T0038922.1 MGP_129S1SvImJ_G0021160.1 mouse_genomes_project 14 27273039 27280270 + MGP_129S1SvImJ_P0038922 Gdf2 protein_coding protein_coding MGP_129S1SvImJ_T0003554.1 MGP_129S1SvImJ_G0003229.1 mouse_genomes_project 14 18799824 18813656 - Anxa11os antisense antisense MGP_129S1SvImJ_T0102251.1 MGP_129S1SvImJ_G0040085.1 mouse_genomes_project 14 122520471 122520756 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0039213.1 MGP_129S1SvImJ_G0021267.1 mouse_genomes_project 14 44985772 44989185 - MGP_129S1SvImJ_P0039213 Rnase9 protein_coding protein_coding MGP_129S1SvImJ_T0038331.1 MGP_129S1SvImJ_G0021004.1 mouse_genomes_project 14 6471382 6485809 - MGP_129S1SvImJ_P0038331 Thoc7 protein_coding protein_coding MGP_129S1SvImJ_T0099394.1 MGP_129S1SvImJ_G0037461.1 mouse_genomes_project 14 42559263 42559370 - Gm25380 snRNA snRNA MGP_129S1SvImJ_T0040335.1 MGP_129S1SvImJ_G0021640.1 mouse_genomes_project 14 102682187 102685262 + MGP_129S1SvImJ_P0040335 Trim52 protein_coding protein_coding MGP_129S1SvImJ_T0040336.1 MGP_129S1SvImJ_G0021640.1 mouse_genomes_project 14 102682188 102702902 + Trim52 protein_coding processed_transcript MGP_129S1SvImJ_T0102243.1 MGP_129S1SvImJ_G0040077.1 mouse_genomes_project 14 45181942 45182394 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0038281.1 MGP_129S1SvImJ_G0020987.1 mouse_genomes_project 14 413348 424633 + MGP_129S1SvImJ_P0038281 protein_coding protein_coding MGP_129S1SvImJ_T0038282.1 MGP_129S1SvImJ_G0020987.1 mouse_genomes_project 14 422873 423350 + MGP_129S1SvImJ_P0038282 protein_coding protein_coding MGP_129S1SvImJ_T0038311.1 MGP_129S1SvImJ_G0020997.1 mouse_genomes_project 14 3935400 4672520 + MGP_129S1SvImJ_P0038311 Ptprg protein_coding protein_coding MGP_129S1SvImJ_T0038312.1 MGP_129S1SvImJ_G0020997.1 mouse_genomes_project 14 3935421 4669262 + MGP_129S1SvImJ_P0038312 Ptprg protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038313.1 MGP_129S1SvImJ_G0020997.1 mouse_genomes_project 14 3935449 4371754 + Ptprg protein_coding retained_intron MGP_129S1SvImJ_T0038314.1 MGP_129S1SvImJ_G0020997.1 mouse_genomes_project 14 4511771 4543678 + MGP_129S1SvImJ_P0038314 Ptprg protein_coding protein_coding MGP_129S1SvImJ_T0038315.1 MGP_129S1SvImJ_G0020997.1 mouse_genomes_project 14 4614556 4669261 + MGP_129S1SvImJ_P0038315 Ptprg protein_coding protein_coding MGP_129S1SvImJ_T0038316.1 MGP_129S1SvImJ_G0020997.1 mouse_genomes_project 14 4643370 4647963 + Ptprg protein_coding processed_transcript MGP_129S1SvImJ_T0040002.1 MGP_129S1SvImJ_G0021525.1 mouse_genomes_project 14 64352560 64372678 + MGP_129S1SvImJ_P0040002 Tnfrsf10b protein_coding protein_coding MGP_129S1SvImJ_T0039009.1 MGP_129S1SvImJ_G0021201.1 mouse_genomes_project 14 37615941 37621266 - MGP_129S1SvImJ_P0039009 Ang6 protein_coding protein_coding MGP_129S1SvImJ_T0039010.1 MGP_129S1SvImJ_G0021201.1 mouse_genomes_project 14 37616103 37616547 - MGP_129S1SvImJ_P0039010 Ang6 protein_coding protein_coding MGP_129S1SvImJ_T0040163.1 MGP_129S1SvImJ_G0021578.1 mouse_genomes_project 14 70991905 71016594 - MGP_129S1SvImJ_P0040163 Gpalpp1 protein_coding protein_coding MGP_129S1SvImJ_T0002537.1 MGP_129S1SvImJ_G0002442.1 mouse_genomes_project 14 48097090 48097152 + MGP_129S1SvImJ_P0002537 Traj49 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0002538.1 MGP_129S1SvImJ_G0002442.1 mouse_genomes_project 14 48097090 48097149 + Traj49 TR_J_gene processed_transcript MGP_129S1SvImJ_T0012993.1 MGP_129S1SvImJ_G0011082.1 mouse_genomes_project 14 13138734 13138858 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003557.1 MGP_129S1SvImJ_G0003232.1 mouse_genomes_project 14 23906043 23916069 - 1700087M22Rik antisense antisense MGP_129S1SvImJ_T0002653.1 MGP_129S1SvImJ_G0002544.1 mouse_genomes_project 14 47026132 47026664 + MGP_129S1SvImJ_P0002653 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0040339.1 MGP_129S1SvImJ_G0021643.1 mouse_genomes_project 14 108943272 108952048 + MGP_129S1SvImJ_P0040339 Slitrk5 protein_coding protein_coding MGP_129S1SvImJ_T0038507.1 MGP_129S1SvImJ_G0021058.1 mouse_genomes_project 14 14832272 14839344 - MGP_129S1SvImJ_P0038507 Zfp503 protein_coding protein_coding MGP_129S1SvImJ_T0017435.1 MGP_129S1SvImJ_G0015275.1 mouse_genomes_project 14 62155702 62165188 - Gm10860 processed_transcript processed_transcript MGP_129S1SvImJ_T0039481.1 MGP_129S1SvImJ_G0021337.1 mouse_genomes_project 14 49012765 49021352 + MGP_129S1SvImJ_P0039481 Ngdn protein_coding protein_coding MGP_129S1SvImJ_T0038891.1 MGP_129S1SvImJ_G0021153.1 mouse_genomes_project 14 26237753 26484411 - MGP_129S1SvImJ_P0038891 Wdfy4 protein_coding protein_coding MGP_129S1SvImJ_T0038892.1 MGP_129S1SvImJ_G0021153.1 mouse_genomes_project 14 26237776 26484411 - MGP_129S1SvImJ_P0038892 Wdfy4 protein_coding protein_coding MGP_129S1SvImJ_T0038899.1 MGP_129S1SvImJ_G0021153.1 mouse_genomes_project 14 26297061 26484785 - MGP_129S1SvImJ_P0038899 Wdfy4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0038900.1 MGP_129S1SvImJ_G0021153.1 mouse_genomes_project 14 26301304 26306354 - MGP_129S1SvImJ_P0038900 Wdfy4 protein_coding protein_coding MGP_129S1SvImJ_T0038901.1 MGP_129S1SvImJ_G0021153.1 mouse_genomes_project 14 26458222 26484853 - MGP_129S1SvImJ_P0038901 Wdfy4 protein_coding protein_coding MGP_129S1SvImJ_T0013022.1 MGP_129S1SvImJ_G0011111.1 mouse_genomes_project 14 48262257 48263923 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039165.1 MGP_129S1SvImJ_G0021242.1 mouse_genomes_project 14 44201692 44202686 - MGP_129S1SvImJ_P0039165 Olfr733 protein_coding protein_coding MGP_129S1SvImJ_T0040003.1 MGP_129S1SvImJ_G0021526.1 mouse_genomes_project 14 64377026 64398781 - MGP_129S1SvImJ_P0040003 Rhobtb2 protein_coding protein_coding MGP_129S1SvImJ_T0100671.1 MGP_129S1SvImJ_G0038738.1 mouse_genomes_project 14 26505040 26505169 + Gm25498 snoRNA snoRNA MGP_129S1SvImJ_T0040005.1 MGP_129S1SvImJ_G0021528.1 mouse_genomes_project 14 64697560 64700272 + MGP_129S1SvImJ_P0040005 Egr3 protein_coding protein_coding MGP_129S1SvImJ_T0006669.1 MGP_129S1SvImJ_G0005521.1 mouse_genomes_project 14 16187775 16189128 - A830039N20Rik lincRNA lincRNA MGP_129S1SvImJ_T0010028.1 MGP_129S1SvImJ_G0008144.1 mouse_genomes_project 14 93221830 93221935 - Gm27441 miRNA miRNA MGP_129S1SvImJ_T0038594.1 MGP_129S1SvImJ_G0021080.1 mouse_genomes_project 14 19383626 19510735 - MGP_129S1SvImJ_P0038594 Slmap protein_coding protein_coding MGP_129S1SvImJ_T0038595.1 MGP_129S1SvImJ_G0021080.1 mouse_genomes_project 14 19383631 19445006 - MGP_129S1SvImJ_P0038595 Slmap protein_coding protein_coding MGP_129S1SvImJ_T0038596.1 MGP_129S1SvImJ_G0021080.1 mouse_genomes_project 14 19383632 19430208 - MGP_129S1SvImJ_P0038596 Slmap protein_coding protein_coding MGP_129S1SvImJ_T0038597.1 MGP_129S1SvImJ_G0021080.1 mouse_genomes_project 14 19383633 19509544 - MGP_129S1SvImJ_P0038597 Slmap protein_coding protein_coding MGP_129S1SvImJ_T0038598.1 MGP_129S1SvImJ_G0021080.1 mouse_genomes_project 14 19383858 19509422 - MGP_129S1SvImJ_P0038598 Slmap protein_coding protein_coding MGP_129S1SvImJ_T0038599.1 MGP_129S1SvImJ_G0021080.1 mouse_genomes_project 14 19383858 19509422 - MGP_129S1SvImJ_P0038599 Slmap protein_coding protein_coding MGP_129S1SvImJ_T0038600.1 MGP_129S1SvImJ_G0021080.1 mouse_genomes_project 14 19384754 19510699 - MGP_129S1SvImJ_P0038600 Slmap protein_coding protein_coding MGP_129S1SvImJ_T0038601.1 MGP_129S1SvImJ_G0021080.1 mouse_genomes_project 14 19385188 19430195 - MGP_129S1SvImJ_P0038601 Slmap protein_coding protein_coding MGP_129S1SvImJ_T0038602.1 MGP_129S1SvImJ_G0021080.1 mouse_genomes_project 14 19392915 19412968 - MGP_129S1SvImJ_P0038602 Slmap protein_coding protein_coding MGP_129S1SvImJ_T0038603.1 MGP_129S1SvImJ_G0021080.1 mouse_genomes_project 14 19397710 19412799 - Slmap protein_coding processed_transcript MGP_129S1SvImJ_T0038604.1 MGP_129S1SvImJ_G0021080.1 mouse_genomes_project 14 19397786 19400563 - Slmap protein_coding retained_intron MGP_129S1SvImJ_T0038605.1 MGP_129S1SvImJ_G0021080.1 mouse_genomes_project 14 19398009 19413034 - MGP_129S1SvImJ_P0038605 Slmap protein_coding protein_coding MGP_129S1SvImJ_T0038606.1 MGP_129S1SvImJ_G0021080.1 mouse_genomes_project 14 19398735 19409365 - Slmap protein_coding retained_intron MGP_129S1SvImJ_T0038607.1 MGP_129S1SvImJ_G0021080.1 mouse_genomes_project 14 19407303 19412882 - Slmap protein_coding retained_intron MGP_129S1SvImJ_T0038608.1 MGP_129S1SvImJ_G0021080.1 mouse_genomes_project 14 19412767 19433717 - MGP_129S1SvImJ_P0038608 Slmap protein_coding protein_coding MGP_129S1SvImJ_T0038609.1 MGP_129S1SvImJ_G0021080.1 mouse_genomes_project 14 19429822 19433708 - Slmap protein_coding retained_intron MGP_129S1SvImJ_T0039456.1 MGP_129S1SvImJ_G0021328.1 mouse_genomes_project 14 48865432 48880147 + MGP_129S1SvImJ_P0039456 Gm20521 protein_coding protein_coding MGP_129S1SvImJ_T0010023.1 MGP_129S1SvImJ_G0008139.1 mouse_genomes_project 14 67943631 67943720 - Mir687 miRNA miRNA MGP_129S1SvImJ_T0009989.1 MGP_129S1SvImJ_G0008105.1 mouse_genomes_project 14 10797097 10797176 + Gm44469 miRNA miRNA MGP_129S1SvImJ_T0039810.1 MGP_129S1SvImJ_G0021449.1 mouse_genomes_project 14 57134209 57224103 - MGP_129S1SvImJ_P0039810 Ints6 protein_coding protein_coding MGP_129S1SvImJ_T0039811.1 MGP_129S1SvImJ_G0021449.1 mouse_genomes_project 14 57152839 57223649 - MGP_129S1SvImJ_P0039811 Ints6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0100711.1 MGP_129S1SvImJ_G0038778.1 mouse_genomes_project 14 101191462 101191579 - Gm25724 snoRNA snoRNA MGP_129S1SvImJ_T0013036.1 MGP_129S1SvImJ_G0011125.1 mouse_genomes_project 14 54498094 54498299 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039640.1 MGP_129S1SvImJ_G0021374.1 mouse_genomes_project 14 49905871 49928779 + MGP_129S1SvImJ_P0039640 Nynrin protein_coding protein_coding MGP_129S1SvImJ_T0039641.1 MGP_129S1SvImJ_G0021374.1 mouse_genomes_project 14 49905950 49929223 + MGP_129S1SvImJ_P0039641 Nynrin protein_coding protein_coding MGP_129S1SvImJ_T0039652.1 MGP_129S1SvImJ_G0021384.1 mouse_genomes_project 14 50175284 50177978 - MGP_129S1SvImJ_P0039652 Ctsg protein_coding protein_coding MGP_129S1SvImJ_T0040249.1 MGP_129S1SvImJ_G0021611.1 mouse_genomes_project 14 91979990 91981500 + MGP_129S1SvImJ_P0040249 4921530L21Rik protein_coding protein_coding MGP_129S1SvImJ_T0040298.1 MGP_129S1SvImJ_G0021629.1 mouse_genomes_project 14 99569778 99589147 - MGP_129S1SvImJ_P0040298 Fbxl3 protein_coding protein_coding MGP_129S1SvImJ_T0040299.1 MGP_129S1SvImJ_G0021629.1 mouse_genomes_project 14 99570573 99588587 - MGP_129S1SvImJ_P0040299 Fbxl3 protein_coding protein_coding MGP_129S1SvImJ_T0040300.1 MGP_129S1SvImJ_G0021629.1 mouse_genomes_project 14 99571223 99588563 - MGP_129S1SvImJ_P0040300 Fbxl3 protein_coding protein_coding MGP_129S1SvImJ_T0040301.1 MGP_129S1SvImJ_G0021629.1 mouse_genomes_project 14 99572644 99579423 - Fbxl3 protein_coding retained_intron MGP_129S1SvImJ_T0040302.1 MGP_129S1SvImJ_G0021629.1 mouse_genomes_project 14 99579019 99589159 - MGP_129S1SvImJ_P0040302 Fbxl3 protein_coding protein_coding MGP_129S1SvImJ_T0040303.1 MGP_129S1SvImJ_G0021629.1 mouse_genomes_project 14 99579057 99585331 - MGP_129S1SvImJ_P0040303 Fbxl3 protein_coding protein_coding MGP_129S1SvImJ_T0099418.1 MGP_129S1SvImJ_G0037485.1 mouse_genomes_project 14 94881272 94881379 + Gm26139 snRNA snRNA MGP_129S1SvImJ_T0038283.1 MGP_129S1SvImJ_G0020988.1 mouse_genomes_project 14 431116 501328 + MGP_129S1SvImJ_P0038283 Pxk protein_coding protein_coding MGP_129S1SvImJ_T0038284.1 MGP_129S1SvImJ_G0020988.1 mouse_genomes_project 14 431116 501328 + MGP_129S1SvImJ_P0038284 Pxk protein_coding protein_coding MGP_129S1SvImJ_T0040202.1 MGP_129S1SvImJ_G0021593.1 mouse_genomes_project 14 74321494 74357337 - MGP_129S1SvImJ_P0040202 Zfp957 protein_coding protein_coding MGP_129S1SvImJ_T0040203.1 MGP_129S1SvImJ_G0021593.1 mouse_genomes_project 14 74321496 74333932 - MGP_129S1SvImJ_P0040203 Zfp957 protein_coding protein_coding MGP_129S1SvImJ_T0040204.1 MGP_129S1SvImJ_G0021593.1 mouse_genomes_project 14 74332986 74357410 - Zfp957 protein_coding retained_intron MGP_129S1SvImJ_T0039011.1 MGP_129S1SvImJ_G0021202.1 mouse_genomes_project 14 38425144 38436492 - MGP_129S1SvImJ_P0039011 Ptgdr protein_coding protein_coding MGP_129S1SvImJ_T0039180.1 MGP_129S1SvImJ_G0021254.1 mouse_genomes_project 14 44608232 44608905 + MGP_129S1SvImJ_P0039180 protein_coding protein_coding MGP_129S1SvImJ_T0039879.1 MGP_129S1SvImJ_G0021480.1 mouse_genomes_project 14 60002543 60031857 - MGP_129S1SvImJ_P0039879 Pnoc protein_coding protein_coding MGP_129S1SvImJ_T0012984.1 MGP_129S1SvImJ_G0011073.1 mouse_genomes_project 14 5835027 5835159 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038446.1 MGP_129S1SvImJ_G0021044.1 mouse_genomes_project 14 13469578 13470999 + MGP_129S1SvImJ_P0038446 Chchd1 protein_coding protein_coding MGP_129S1SvImJ_T0017459.1 MGP_129S1SvImJ_G0015285.1 mouse_genomes_project 14 116736659 116753242 + Gm16835 processed_transcript processed_transcript MGP_129S1SvImJ_T0040219.1 MGP_129S1SvImJ_G0021602.1 mouse_genomes_project 14 74784178 74808695 - MGP_129S1SvImJ_P0040219 Lect1 protein_coding protein_coding MGP_129S1SvImJ_T0040220.1 MGP_129S1SvImJ_G0021602.1 mouse_genomes_project 14 74784181 74808781 - MGP_129S1SvImJ_P0040220 Lect1 protein_coding protein_coding MGP_129S1SvImJ_T0040221.1 MGP_129S1SvImJ_G0021602.1 mouse_genomes_project 14 74784304 74788684 - Lect1 protein_coding retained_intron MGP_129S1SvImJ_T0040222.1 MGP_129S1SvImJ_G0021602.1 mouse_genomes_project 14 74787965 74791999 - Lect1 protein_coding processed_transcript MGP_129S1SvImJ_T0040223.1 MGP_129S1SvImJ_G0021602.1 mouse_genomes_project 14 74788475 74792147 - Lect1 protein_coding retained_intron MGP_129S1SvImJ_T0039509.1 MGP_129S1SvImJ_G0021344.1 mouse_genomes_project 14 49519999 49537156 + MGP_129S1SvImJ_P0039509 Lrrc16b protein_coding protein_coding MGP_129S1SvImJ_T0039510.1 MGP_129S1SvImJ_G0021344.1 mouse_genomes_project 14 49520150 49537181 + MGP_129S1SvImJ_P0039510 Lrrc16b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0002536.1 MGP_129S1SvImJ_G0002441.1 mouse_genomes_project 14 48095994 48096057 + MGP_129S1SvImJ_P0002536 Traj50 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0038826.1 MGP_129S1SvImJ_G0021133.1 mouse_genomes_project 14 24835626 24861711 + Btd protein_coding processed_transcript MGP_129S1SvImJ_T0038827.1 MGP_129S1SvImJ_G0021133.1 mouse_genomes_project 14 24835655 24863119 + MGP_129S1SvImJ_P0038827 Btd protein_coding protein_coding MGP_129S1SvImJ_T0002578.1 MGP_129S1SvImJ_G0002481.1 mouse_genomes_project 14 48140986 48141048 + MGP_129S1SvImJ_P0002578 Traj6 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0038948.1 MGP_129S1SvImJ_G0021176.1 mouse_genomes_project 14 27869750 27880769 - MGP_129S1SvImJ_P0038948 9230112D13Rik protein_coding protein_coding MGP_129S1SvImJ_T0002606.1 MGP_129S1SvImJ_G0002507.1 mouse_genomes_project 14 48147138 48147167 + TR_J_pseudogene TR_J_pseudogene MGP_129S1SvImJ_T0039181.1 MGP_129S1SvImJ_G0021255.1 mouse_genomes_project 14 44620988 44628814 - MGP_129S1SvImJ_P0039181 protein_coding protein_coding MGP_129S1SvImJ_T0039746.1 MGP_129S1SvImJ_G0021423.1 mouse_genomes_project 14 53677758 53694168 - MGP_129S1SvImJ_P0039746 Phf11c protein_coding protein_coding MGP_129S1SvImJ_T0010015.1 MGP_129S1SvImJ_G0008131.1 mouse_genomes_project 14 58266860 58266939 + Mir598 miRNA miRNA MGP_129S1SvImJ_T0099395.1 MGP_129S1SvImJ_G0037462.1 mouse_genomes_project 14 42639332 42639437 - Gm22699 snRNA snRNA MGP_129S1SvImJ_T0039620.1 MGP_129S1SvImJ_G0021365.1 mouse_genomes_project 14 49758359 49764685 - MGP_129S1SvImJ_P0039620 Rabggta protein_coding protein_coding MGP_129S1SvImJ_T0039621.1 MGP_129S1SvImJ_G0021365.1 mouse_genomes_project 14 49758363 49764663 - MGP_129S1SvImJ_P0039621 Rabggta protein_coding protein_coding MGP_129S1SvImJ_T0039622.1 MGP_129S1SvImJ_G0021365.1 mouse_genomes_project 14 49758811 49764744 - MGP_129S1SvImJ_P0039622 Rabggta protein_coding protein_coding MGP_129S1SvImJ_T0100694.1 MGP_129S1SvImJ_G0038761.1 mouse_genomes_project 14 73675071 73675193 + Gm26251 snoRNA snoRNA MGP_129S1SvImJ_T0039596.1 MGP_129S1SvImJ_G0021358.1 mouse_genomes_project 14 49677044 49684331 - MGP_129S1SvImJ_P0039596 Tm9sf1 protein_coding protein_coding MGP_129S1SvImJ_T0039597.1 MGP_129S1SvImJ_G0021358.1 mouse_genomes_project 14 49677044 49685585 - MGP_129S1SvImJ_P0039597 Tm9sf1 protein_coding protein_coding MGP_129S1SvImJ_T0039598.1 MGP_129S1SvImJ_G0021358.1 mouse_genomes_project 14 49677047 49684395 - MGP_129S1SvImJ_P0039598 Tm9sf1 protein_coding protein_coding MGP_129S1SvImJ_T0039599.1 MGP_129S1SvImJ_G0021358.1 mouse_genomes_project 14 49677091 49684434 - MGP_129S1SvImJ_P0039599 Tm9sf1 protein_coding protein_coding MGP_129S1SvImJ_T0039600.1 MGP_129S1SvImJ_G0021358.1 mouse_genomes_project 14 49677095 49684441 - MGP_129S1SvImJ_P0039600 Tm9sf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039601.1 MGP_129S1SvImJ_G0021358.1 mouse_genomes_project 14 49677139 49684420 - MGP_129S1SvImJ_P0039601 Tm9sf1 protein_coding protein_coding MGP_129S1SvImJ_T0039602.1 MGP_129S1SvImJ_G0021358.1 mouse_genomes_project 14 49678912 49684603 - MGP_129S1SvImJ_P0039602 Tm9sf1 protein_coding protein_coding MGP_129S1SvImJ_T0039603.1 MGP_129S1SvImJ_G0021358.1 mouse_genomes_project 14 49679380 49682140 - Tm9sf1 protein_coding processed_transcript MGP_129S1SvImJ_T0039604.1 MGP_129S1SvImJ_G0021358.1 mouse_genomes_project 14 49681175 49684451 - Tm9sf1 protein_coding retained_intron MGP_129S1SvImJ_T0039605.1 MGP_129S1SvImJ_G0021358.1 mouse_genomes_project 14 49681464 49684640 - Tm9sf1 protein_coding processed_transcript MGP_129S1SvImJ_T0039606.1 MGP_129S1SvImJ_G0021358.1 mouse_genomes_project 14 49681523 49682679 - Tm9sf1 protein_coding retained_intron MGP_129S1SvImJ_T0039607.1 MGP_129S1SvImJ_G0021358.1 mouse_genomes_project 14 49682497 49685550 - MGP_129S1SvImJ_P0039607 Tm9sf1 protein_coding protein_coding MGP_129S1SvImJ_T0039608.1 MGP_129S1SvImJ_G0021358.1 mouse_genomes_project 14 49683663 49684413 - MGP_129S1SvImJ_P0039608 Tm9sf1 protein_coding protein_coding MGP_129S1SvImJ_T0100676.1 MGP_129S1SvImJ_G0038743.1 mouse_genomes_project 14 46082472 46082542 + Gm22354 snoRNA snoRNA MGP_129S1SvImJ_T0040312.1 MGP_129S1SvImJ_G0021631.1 mouse_genomes_project 14 100030988 100137010 + MGP_129S1SvImJ_P0040312 Scel protein_coding protein_coding MGP_129S1SvImJ_T0013047.1 MGP_129S1SvImJ_G0011136.1 mouse_genomes_project 14 69524716 69543674 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013055.1 MGP_129S1SvImJ_G0011144.1 mouse_genomes_project 14 95681999 95682340 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039173.1 MGP_129S1SvImJ_G0021247.1 mouse_genomes_project 14 44331056 44331992 + MGP_129S1SvImJ_P0039173 Olfr738 protein_coding protein_coding MGP_129S1SvImJ_T0002541.1 MGP_129S1SvImJ_G0002444.1 mouse_genomes_project 14 48100199 48100256 + MGP_129S1SvImJ_P0002541 Traj47 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0002562.1 MGP_129S1SvImJ_G0002465.1 mouse_genomes_project 14 48123122 48123179 + MGP_129S1SvImJ_P0002562 Traj25 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0099420.1 MGP_129S1SvImJ_G0037487.1 mouse_genomes_project 14 95651447 95651603 - Gm25130 snRNA snRNA MGP_129S1SvImJ_T0039691.1 MGP_129S1SvImJ_G0021407.1 mouse_genomes_project 14 51715485 51735825 + MGP_129S1SvImJ_P0039691 Il17d protein_coding protein_coding MGP_129S1SvImJ_T0102250.1 MGP_129S1SvImJ_G0040084.1 mouse_genomes_project 14 55545325 55569435 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0038426.1 MGP_129S1SvImJ_G0021038.1 mouse_genomes_project 14 13260773 13312853 - MGP_129S1SvImJ_P0038426 Ppp3cb protein_coding protein_coding MGP_129S1SvImJ_T0038427.1 MGP_129S1SvImJ_G0021038.1 mouse_genomes_project 14 13261277 13312827 - MGP_129S1SvImJ_P0038427 Ppp3cb protein_coding protein_coding MGP_129S1SvImJ_T0038428.1 MGP_129S1SvImJ_G0021038.1 mouse_genomes_project 14 13261439 13312792 - MGP_129S1SvImJ_P0038428 Ppp3cb protein_coding protein_coding MGP_129S1SvImJ_T0038429.1 MGP_129S1SvImJ_G0021038.1 mouse_genomes_project 14 13262961 13265147 - Ppp3cb protein_coding retained_intron MGP_129S1SvImJ_T0038430.1 MGP_129S1SvImJ_G0021038.1 mouse_genomes_project 14 13270600 13312720 - MGP_129S1SvImJ_P0038430 Ppp3cb protein_coding protein_coding MGP_129S1SvImJ_T0038431.1 MGP_129S1SvImJ_G0021038.1 mouse_genomes_project 14 13272378 13278947 - Ppp3cb protein_coding retained_intron MGP_129S1SvImJ_T0038432.1 MGP_129S1SvImJ_G0021038.1 mouse_genomes_project 14 13278378 13283659 - Ppp3cb protein_coding retained_intron MGP_129S1SvImJ_T0038433.1 MGP_129S1SvImJ_G0021038.1 mouse_genomes_project 14 13283545 13287602 - Ppp3cb protein_coding retained_intron MGP_129S1SvImJ_T0038504.1 MGP_129S1SvImJ_G0021057.1 mouse_genomes_project 14 14697461 14699201 - Comtd1 protein_coding retained_intron MGP_129S1SvImJ_T0038505.1 MGP_129S1SvImJ_G0021057.1 mouse_genomes_project 14 14697467 14698114 - Comtd1 protein_coding retained_intron MGP_129S1SvImJ_T0038506.1 MGP_129S1SvImJ_G0021057.1 mouse_genomes_project 14 14697557 14699255 - MGP_129S1SvImJ_P0038506 Comtd1 protein_coding protein_coding MGP_129S1SvImJ_T0039816.1 MGP_129S1SvImJ_G0021454.1 mouse_genomes_project 14 57515920 57519696 - MGP_129S1SvImJ_P0039816 Defb30 protein_coding protein_coding MGP_129S1SvImJ_T0039817.1 MGP_129S1SvImJ_G0021454.1 mouse_genomes_project 14 57516324 57531836 - MGP_129S1SvImJ_P0039817 Defb30 protein_coding protein_coding MGP_129S1SvImJ_T0039818.1 MGP_129S1SvImJ_G0021454.1 mouse_genomes_project 14 57517648 57531841 - MGP_129S1SvImJ_P0039818 Defb30 protein_coding protein_coding MGP_129S1SvImJ_T0039819.1 MGP_129S1SvImJ_G0021454.1 mouse_genomes_project 14 57517734 57519709 - MGP_129S1SvImJ_P0039819 Defb30 protein_coding protein_coding MGP_129S1SvImJ_T0017454.1 MGP_129S1SvImJ_G0015282.1 mouse_genomes_project 14 112866495 112883722 - 4930505G20Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0040026.1 MGP_129S1SvImJ_G0021534.1 mouse_genomes_project 14 64846131 64932622 - MGP_129S1SvImJ_P0040026 Ppp3cc protein_coding protein_coding MGP_129S1SvImJ_T0038578.1 MGP_129S1SvImJ_G0021076.1 mouse_genomes_project 14 18890785 18904630 + MGP_129S1SvImJ_P0038578 protein_coding protein_coding MGP_129S1SvImJ_T0038581.1 MGP_129S1SvImJ_G0021076.1 mouse_genomes_project 14 18890837 18904621 + MGP_129S1SvImJ_P0038581 protein_coding protein_coding MGP_129S1SvImJ_T0039013.1 MGP_129S1SvImJ_G0021204.1 mouse_genomes_project 14 38740340 38833983 - MGP_129S1SvImJ_P0039013 Txndc16 protein_coding protein_coding MGP_129S1SvImJ_T0039014.1 MGP_129S1SvImJ_G0021204.1 mouse_genomes_project 14 38740791 38834014 - MGP_129S1SvImJ_P0039014 Txndc16 protein_coding protein_coding MGP_129S1SvImJ_T0039015.1 MGP_129S1SvImJ_G0021204.1 mouse_genomes_project 14 38740799 38834917 - MGP_129S1SvImJ_P0039015 Txndc16 protein_coding protein_coding MGP_129S1SvImJ_T0039016.1 MGP_129S1SvImJ_G0021204.1 mouse_genomes_project 14 38771848 38776353 - Txndc16 protein_coding retained_intron MGP_129S1SvImJ_T0039017.1 MGP_129S1SvImJ_G0021204.1 mouse_genomes_project 14 38774382 38833979 - Txndc16 protein_coding retained_intron MGP_129S1SvImJ_T0039018.1 MGP_129S1SvImJ_G0021204.1 mouse_genomes_project 14 38775251 38833971 - Txndc16 protein_coding retained_intron MGP_129S1SvImJ_T0039019.1 MGP_129S1SvImJ_G0021204.1 mouse_genomes_project 14 38820788 38833986 - MGP_129S1SvImJ_P0039019 Txndc16 protein_coding protein_coding MGP_129S1SvImJ_T0039020.1 MGP_129S1SvImJ_G0021204.1 mouse_genomes_project 14 38822067 38833991 - Txndc16 protein_coding retained_intron MGP_129S1SvImJ_T0039021.1 MGP_129S1SvImJ_G0021204.1 mouse_genomes_project 14 38827882 38833953 - Txndc16 protein_coding processed_transcript MGP_129S1SvImJ_T0039022.1 MGP_129S1SvImJ_G0021204.1 mouse_genomes_project 14 38832476 38833979 - Txndc16 protein_coding processed_transcript MGP_129S1SvImJ_T0038699.1 MGP_129S1SvImJ_G0021110.1 mouse_genomes_project 14 24034002 24052760 + MGP_129S1SvImJ_P0038699 Itih4 protein_coding protein_coding MGP_129S1SvImJ_T0038700.1 MGP_129S1SvImJ_G0021110.1 mouse_genomes_project 14 24034028 24052623 + MGP_129S1SvImJ_P0038700 Itih4 protein_coding protein_coding MGP_129S1SvImJ_T0038701.1 MGP_129S1SvImJ_G0021110.1 mouse_genomes_project 14 24034028 24052727 + MGP_129S1SvImJ_P0038701 Itih4 protein_coding protein_coding MGP_129S1SvImJ_T0038702.1 MGP_129S1SvImJ_G0021110.1 mouse_genomes_project 14 24034047 24052625 + MGP_129S1SvImJ_P0038702 Itih4 protein_coding protein_coding MGP_129S1SvImJ_T0038703.1 MGP_129S1SvImJ_G0021110.1 mouse_genomes_project 14 24050002 24052628 + Itih4 protein_coding retained_intron MGP_129S1SvImJ_T0039758.1 MGP_129S1SvImJ_G0021428.1 mouse_genomes_project 14 53963788 54516183 - MGP_129S1SvImJ_P0039758 Atp8a2 protein_coding protein_coding MGP_129S1SvImJ_T0039759.1 MGP_129S1SvImJ_G0021428.1 mouse_genomes_project 14 54349880 54424182 - MGP_129S1SvImJ_P0039759 Atp8a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039760.1 MGP_129S1SvImJ_G0021428.1 mouse_genomes_project 14 54366100 54542427 - MGP_129S1SvImJ_P0039760 Atp8a2 protein_coding protein_coding MGP_129S1SvImJ_T0039761.1 MGP_129S1SvImJ_G0021428.1 mouse_genomes_project 14 54423881 54516335 - MGP_129S1SvImJ_P0039761 Atp8a2 protein_coding protein_coding MGP_129S1SvImJ_T0039762.1 MGP_129S1SvImJ_G0021428.1 mouse_genomes_project 14 54423940 54425388 - MGP_129S1SvImJ_P0039762 Atp8a2 protein_coding protein_coding MGP_129S1SvImJ_T0039765.1 MGP_129S1SvImJ_G0021428.1 mouse_genomes_project 14 54528024 54542391 - Atp8a2 protein_coding processed_transcript MGP_129S1SvImJ_T0013042.1 MGP_129S1SvImJ_G0011131.1 mouse_genomes_project 14 68723468 68724017 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0040154.1 MGP_129S1SvImJ_G0021574.1 mouse_genomes_project 14 70618333 70646881 - MGP_129S1SvImJ_P0040154 Slc25a30 protein_coding protein_coding MGP_129S1SvImJ_T0039661.1 MGP_129S1SvImJ_G0021393.1 mouse_genomes_project 14 50489876 50616507 + MGP_129S1SvImJ_P0039661 Rnf17 protein_coding protein_coding MGP_129S1SvImJ_T0039225.1 MGP_129S1SvImJ_G0021277.1 mouse_genomes_project 14 45172728 45173166 - MGP_129S1SvImJ_P0039225 Ang2 protein_coding protein_coding MGP_129S1SvImJ_T0099413.1 MGP_129S1SvImJ_G0037480.1 mouse_genomes_project 14 81867140 81867280 + Gm25115 snRNA snRNA MGP_129S1SvImJ_T0038537.1 MGP_129S1SvImJ_G0021062.1 mouse_genomes_project 14 17216851 17234239 + MGP_129S1SvImJ_P0038537 E330034G19Rik protein_coding protein_coding MGP_129S1SvImJ_T0038538.1 MGP_129S1SvImJ_G0021062.1 mouse_genomes_project 14 17216873 17232211 + MGP_129S1SvImJ_P0038538 E330034G19Rik protein_coding protein_coding MGP_129S1SvImJ_T0038539.1 MGP_129S1SvImJ_G0021062.1 mouse_genomes_project 14 17216921 17221921 + E330034G19Rik protein_coding retained_intron MGP_129S1SvImJ_T0038540.1 MGP_129S1SvImJ_G0021062.1 mouse_genomes_project 14 17216956 17234246 + MGP_129S1SvImJ_P0038540 E330034G19Rik protein_coding protein_coding MGP_129S1SvImJ_T0038541.1 MGP_129S1SvImJ_G0021062.1 mouse_genomes_project 14 17216969 17221690 + MGP_129S1SvImJ_P0038541 E330034G19Rik protein_coding protein_coding MGP_129S1SvImJ_T0038542.1 MGP_129S1SvImJ_G0021062.1 mouse_genomes_project 14 17217001 17234239 + MGP_129S1SvImJ_P0038542 E330034G19Rik protein_coding protein_coding MGP_129S1SvImJ_T0040162.1 MGP_129S1SvImJ_G0021577.1 mouse_genomes_project 14 70835832 70845528 + MGP_129S1SvImJ_P0040162 Kctd4 protein_coding protein_coding MGP_129S1SvImJ_T0017432.1 MGP_129S1SvImJ_G0015272.1 mouse_genomes_project 14 61953993 61954685 - Gm20675 processed_transcript processed_transcript MGP_129S1SvImJ_T0038949.1 MGP_129S1SvImJ_G0021177.1 mouse_genomes_project 14 27884659 27948715 - MGP_129S1SvImJ_P0038949 Ldb3 protein_coding protein_coding MGP_129S1SvImJ_T0038950.1 MGP_129S1SvImJ_G0021177.1 mouse_genomes_project 14 27884659 27948641 - MGP_129S1SvImJ_P0038950 Ldb3 protein_coding protein_coding MGP_129S1SvImJ_T0038951.1 MGP_129S1SvImJ_G0021177.1 mouse_genomes_project 14 27884659 27948715 - MGP_129S1SvImJ_P0038951 Ldb3 protein_coding protein_coding MGP_129S1SvImJ_T0038952.1 MGP_129S1SvImJ_G0021177.1 mouse_genomes_project 14 27884659 27948715 - MGP_129S1SvImJ_P0038952 Ldb3 protein_coding protein_coding MGP_129S1SvImJ_T0038953.1 MGP_129S1SvImJ_G0021177.1 mouse_genomes_project 14 27887426 27939728 - MGP_129S1SvImJ_P0038953 Ldb3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0038954.1 MGP_129S1SvImJ_G0021177.1 mouse_genomes_project 14 27920919 27948715 - MGP_129S1SvImJ_P0038954 Ldb3 protein_coding protein_coding MGP_129S1SvImJ_T0038564.1 MGP_129S1SvImJ_G0021071.1 mouse_genomes_project 14 18831292 18846192 - MGP_129S1SvImJ_P0038564 protein_coding protein_coding MGP_129S1SvImJ_T0038565.1 MGP_129S1SvImJ_G0021071.1 mouse_genomes_project 14 18831675 18834169 - MGP_129S1SvImJ_P0038565 protein_coding protein_coding MGP_129S1SvImJ_T0038566.1 MGP_129S1SvImJ_G0021071.1 mouse_genomes_project 14 18831675 18845566 - MGP_129S1SvImJ_P0038566 protein_coding protein_coding MGP_129S1SvImJ_T0038568.1 MGP_129S1SvImJ_G0021071.1 mouse_genomes_project 14 18831719 18845568 - MGP_129S1SvImJ_P0038568 protein_coding protein_coding MGP_129S1SvImJ_T0039160.1 MGP_129S1SvImJ_G0021237.1 mouse_genomes_project 14 44048364 44049300 - MGP_129S1SvImJ_P0039160 Olfr728 protein_coding protein_coding MGP_129S1SvImJ_T0011385.1 MGP_129S1SvImJ_G0009501.1 mouse_genomes_project 14 10493423 10493744 - Gm24140 misc_RNA misc_RNA MGP_129S1SvImJ_T0002555.1 MGP_129S1SvImJ_G0002458.1 mouse_genomes_project 14 48114484 48114550 + MGP_129S1SvImJ_P0002555 Traj32 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0039849.1 MGP_129S1SvImJ_G0021466.1 mouse_genomes_project 14 58497270 58504331 + MGP_129S1SvImJ_P0039849 Sox7 protein_coding protein_coding MGP_129S1SvImJ_T0040304.1 MGP_129S1SvImJ_G0021630.1 mouse_genomes_project 14 99603712 99649148 - MGP_129S1SvImJ_P0040304 Mycbp2 protein_coding protein_coding MGP_129S1SvImJ_T0040305.1 MGP_129S1SvImJ_G0021630.1 mouse_genomes_project 14 99603712 99856827 - MGP_129S1SvImJ_P0040305 Mycbp2 protein_coding protein_coding MGP_129S1SvImJ_T0040306.1 MGP_129S1SvImJ_G0021630.1 mouse_genomes_project 14 99603712 99856451 - MGP_129S1SvImJ_P0040306 Mycbp2 protein_coding protein_coding MGP_129S1SvImJ_T0040307.1 MGP_129S1SvImJ_G0021630.1 mouse_genomes_project 14 99604421 99856550 - MGP_129S1SvImJ_P0040307 Mycbp2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040308.1 MGP_129S1SvImJ_G0021630.1 mouse_genomes_project 14 99604434 99605699 - Mycbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0040309.1 MGP_129S1SvImJ_G0021630.1 mouse_genomes_project 14 99630143 99646218 - Mycbp2 protein_coding retained_intron MGP_129S1SvImJ_T0040310.1 MGP_129S1SvImJ_G0021630.1 mouse_genomes_project 14 99649197 99686353 - MGP_129S1SvImJ_P0040310 Mycbp2 protein_coding protein_coding MGP_129S1SvImJ_T0040311.1 MGP_129S1SvImJ_G0021630.1 mouse_genomes_project 14 99821169 99856841 - Mycbp2 protein_coding retained_intron MGP_129S1SvImJ_T0002644.1 MGP_129S1SvImJ_G0002536.1 mouse_genomes_project 14 46922738 47180057 + MGP_129S1SvImJ_P0002644 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0039642.1 MGP_129S1SvImJ_G0021375.1 mouse_genomes_project 14 49937161 49942498 - MGP_129S1SvImJ_P0039642 Cbln3 protein_coding protein_coding MGP_129S1SvImJ_T0039643.1 MGP_129S1SvImJ_G0021375.1 mouse_genomes_project 14 49940302 49942474 - MGP_129S1SvImJ_P0039643 Cbln3 protein_coding protein_coding MGP_129S1SvImJ_T0040189.1 MGP_129S1SvImJ_G0021584.1 mouse_genomes_project 14 72135043 72732690 + MGP_129S1SvImJ_P0040189 Enox1 protein_coding protein_coding MGP_129S1SvImJ_T0003590.1 MGP_129S1SvImJ_G0003259.1 mouse_genomes_project 14 58663809 58668725 - 4930471C04Rik antisense antisense MGP_129S1SvImJ_T0040049.1 MGP_129S1SvImJ_G0021543.1 mouse_genomes_project 14 65209417 65211926 + Hr protein_coding processed_transcript MGP_129S1SvImJ_T0040050.1 MGP_129S1SvImJ_G0021543.1 mouse_genomes_project 14 65209450 65211872 + Hr protein_coding processed_transcript MGP_129S1SvImJ_T0040051.1 MGP_129S1SvImJ_G0021543.1 mouse_genomes_project 14 65210892 65230888 + MGP_129S1SvImJ_P0040051 Hr protein_coding protein_coding MGP_129S1SvImJ_T0040052.1 MGP_129S1SvImJ_G0021543.1 mouse_genomes_project 14 65211261 65231536 + MGP_129S1SvImJ_P0040052 Hr protein_coding protein_coding MGP_129S1SvImJ_T0040053.1 MGP_129S1SvImJ_G0021543.1 mouse_genomes_project 14 65213106 65231532 + MGP_129S1SvImJ_P0040053 Hr protein_coding protein_coding MGP_129S1SvImJ_T0039414.1 MGP_129S1SvImJ_G0021318.1 mouse_genomes_project 14 48597513 48607402 - MGP_129S1SvImJ_P0039414 Cdh24 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0013048.1 MGP_129S1SvImJ_G0011137.1 mouse_genomes_project 14 75508032 75508785 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038443.1 MGP_129S1SvImJ_G0021042.1 mouse_genomes_project 14 13439991 13461044 + MGP_129S1SvImJ_P0038443 Sec24c protein_coding protein_coding MGP_129S1SvImJ_T0038444.1 MGP_129S1SvImJ_G0021042.1 mouse_genomes_project 14 13439999 13461051 + MGP_129S1SvImJ_P0038444 Sec24c protein_coding unknown_likely_coding MGP_129S1SvImJ_T0006731.1 MGP_129S1SvImJ_G0005564.1 mouse_genomes_project 14 64317880 64334437 + 4930480K23Rik lincRNA lincRNA MGP_129S1SvImJ_T0006732.1 MGP_129S1SvImJ_G0005564.1 mouse_genomes_project 14 64317930 64352186 + 4930480K23Rik lincRNA lincRNA MGP_129S1SvImJ_T0040333.1 MGP_129S1SvImJ_G0021638.1 mouse_genomes_project 14 102484241 102492082 - MGP_129S1SvImJ_P0040333 Spry2 protein_coding protein_coding MGP_129S1SvImJ_T0006696.1 MGP_129S1SvImJ_G0005540.1 mouse_genomes_project 14 40244448 40251181 - Rubie lincRNA lincRNA MGP_129S1SvImJ_T0006721.1 MGP_129S1SvImJ_G0005558.1 mouse_genomes_project 14 56632764 56635202 - Gm26969 lincRNA lincRNA MGP_129S1SvImJ_T0039249.1 MGP_129S1SvImJ_G0021283.1 mouse_genomes_project 14 45927697 45935924 - MGP_129S1SvImJ_P0039249 Ndrg2 protein_coding protein_coding MGP_129S1SvImJ_T0039250.1 MGP_129S1SvImJ_G0021283.1 mouse_genomes_project 14 45927697 45935924 - MGP_129S1SvImJ_P0039250 Ndrg2 protein_coding protein_coding MGP_129S1SvImJ_T0003588.1 MGP_129S1SvImJ_G0003257.1 mouse_genomes_project 14 58018973 58025147 + Gm17232 antisense antisense MGP_129S1SvImJ_T0040231.1 MGP_129S1SvImJ_G0021606.1 mouse_genomes_project 14 79824864 79932388 + MGP_129S1SvImJ_P0040231 Pcdh17 protein_coding protein_coding MGP_129S1SvImJ_T0012996.1 MGP_129S1SvImJ_G0011085.1 mouse_genomes_project 14 18887703 18888892 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039880.1 MGP_129S1SvImJ_G0021481.1 mouse_genomes_project 14 60142287 60206773 - MGP_129S1SvImJ_P0039880 Elp3 protein_coding protein_coding MGP_129S1SvImJ_T0017456.1 MGP_129S1SvImJ_G0015284.1 mouse_genomes_project 14 115810732 115813255 + Gm4675 processed_transcript processed_transcript MGP_129S1SvImJ_T0017457.1 MGP_129S1SvImJ_G0015284.1 mouse_genomes_project 14 115811380 115838274 + Gm4675 processed_transcript processed_transcript MGP_129S1SvImJ_T0017458.1 MGP_129S1SvImJ_G0015284.1 mouse_genomes_project 14 115829395 115829938 + Gm4675 processed_transcript processed_transcript MGP_129S1SvImJ_T0002567.1 MGP_129S1SvImJ_G0002470.1 mouse_genomes_project 14 48127753 48127811 + MGP_129S1SvImJ_P0002567 Traj20 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0002680.1 MGP_129S1SvImJ_G0002566.1 mouse_genomes_project 14 47715902 47716379 + MGP_129S1SvImJ_P0002680 Trav17 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002681.1 MGP_129S1SvImJ_G0002566.1 mouse_genomes_project 14 47715902 47716379 + MGP_129S1SvImJ_P0002681 Trav17 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0012997.1 MGP_129S1SvImJ_G0011086.1 mouse_genomes_project 14 18887704 18888893 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039782.1 MGP_129S1SvImJ_G0021437.1 mouse_genomes_project 14 55504601 55606682 + MGP_129S1SvImJ_P0039782 protein_coding protein_coding MGP_129S1SvImJ_T0039783.1 MGP_129S1SvImJ_G0021437.1 mouse_genomes_project 14 55504635 55565697 + MGP_129S1SvImJ_P0039783 protein_coding protein_coding MGP_129S1SvImJ_T0039784.1 MGP_129S1SvImJ_G0021437.1 mouse_genomes_project 14 55514174 55581529 + MGP_129S1SvImJ_P0039784 protein_coding protein_coding MGP_129S1SvImJ_T0039785.1 MGP_129S1SvImJ_G0021437.1 mouse_genomes_project 14 55539087 55561715 + MGP_129S1SvImJ_P0039785 protein_coding protein_coding MGP_129S1SvImJ_T0039786.1 MGP_129S1SvImJ_G0021437.1 mouse_genomes_project 14 55539302 55581534 + MGP_129S1SvImJ_P0039786 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0039787.1 MGP_129S1SvImJ_G0021437.1 mouse_genomes_project 14 55554886 55570952 + protein_coding retained_intron MGP_129S1SvImJ_T0040387.1 MGP_129S1SvImJ_G0021662.1 mouse_genomes_project 14 119274465 119323581 - MGP_129S1SvImJ_P0040387 Slc15a1 protein_coding protein_coding MGP_129S1SvImJ_T0006702.1 MGP_129S1SvImJ_G0005543.1 mouse_genomes_project 14 44031843 44033655 + Gm45057 lincRNA lincRNA MGP_129S1SvImJ_T0002629.1 MGP_129S1SvImJ_G0002524.1 mouse_genomes_project 14 46746179 46746688 + MGP_129S1SvImJ_P0002629 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0017462.1 MGP_129S1SvImJ_G0015287.1 mouse_genomes_project 14 120385293 120388662 - 2610035F20Rik processed_transcript retained_intron MGP_129S1SvImJ_T0017463.1 MGP_129S1SvImJ_G0015287.1 mouse_genomes_project 14 120385386 120390287 - 2610035F20Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0039612.1 MGP_129S1SvImJ_G0021360.1 mouse_genomes_project 14 49699586 49702215 - MGP_129S1SvImJ_P0039612 Mdp1 protein_coding protein_coding MGP_129S1SvImJ_T0039988.1 MGP_129S1SvImJ_G0021521.1 mouse_genomes_project 14 64122254 64140326 + MGP_129S1SvImJ_P0039988 protein_coding protein_coding MGP_129S1SvImJ_T0039792.1 MGP_129S1SvImJ_G0021440.1 mouse_genomes_project 14 55719964 55740584 - MGP_129S1SvImJ_P0039792 Ebpl protein_coding protein_coding MGP_129S1SvImJ_T0040041.1 MGP_129S1SvImJ_G0021537.1 mouse_genomes_project 14 65090949 65095673 - MGP_129S1SvImJ_P0040041 Polr3d protein_coding protein_coding MGP_129S1SvImJ_T0040042.1 MGP_129S1SvImJ_G0021537.1 mouse_genomes_project 14 65090949 65095429 - MGP_129S1SvImJ_P0040042 Polr3d protein_coding protein_coding MGP_129S1SvImJ_T0038862.1 MGP_129S1SvImJ_G0021141.1 mouse_genomes_project 14 25414197 25436256 - MGP_129S1SvImJ_P0038862 protein_coding protein_coding MGP_129S1SvImJ_T0038863.1 MGP_129S1SvImJ_G0021141.1 mouse_genomes_project 14 25414203 25436210 - MGP_129S1SvImJ_P0038863 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038864.1 MGP_129S1SvImJ_G0021141.1 mouse_genomes_project 14 25424933 25436192 - protein_coding retained_intron MGP_129S1SvImJ_T0038865.1 MGP_129S1SvImJ_G0021141.1 mouse_genomes_project 14 25427337 25436217 - protein_coding retained_intron MGP_129S1SvImJ_T0038866.1 MGP_129S1SvImJ_G0021141.1 mouse_genomes_project 14 25432467 25436243 - protein_coding retained_intron MGP_129S1SvImJ_T0039215.1 MGP_129S1SvImJ_G0021269.1 mouse_genomes_project 14 45006171 45006716 - MGP_129S1SvImJ_P0039215 Rnase12 protein_coding protein_coding MGP_129S1SvImJ_T0040433.1 MGP_129S1SvImJ_G0021677.1 mouse_genomes_project 14 121214332 121570878 - MGP_129S1SvImJ_P0040433 Nalcn protein_coding protein_coding MGP_129S1SvImJ_T0039967.1 MGP_129S1SvImJ_G0021508.1 mouse_genomes_project 14 62833487 62879487 - MGP_129S1SvImJ_P0039967 Nefm protein_coding protein_coding MGP_129S1SvImJ_T0039969.1 MGP_129S1SvImJ_G0021508.1 mouse_genomes_project 14 62873887 62879487 - MGP_129S1SvImJ_P0039969 Nefm protein_coding protein_coding MGP_129S1SvImJ_T0100685.1 MGP_129S1SvImJ_G0038752.1 mouse_genomes_project 14 57096440 57096572 - Gm23816 snoRNA snoRNA MGP_129S1SvImJ_T0010002.1 MGP_129S1SvImJ_G0008118.1 mouse_genomes_project 14 40662848 40662947 - Mir378c miRNA miRNA MGP_129S1SvImJ_T0006676.1 MGP_129S1SvImJ_G0005526.1 mouse_genomes_project 14 18277788 18302768 - Gm26660 lincRNA lincRNA MGP_129S1SvImJ_T0010008.1 MGP_129S1SvImJ_G0008124.1 mouse_genomes_project 14 50150100 50150168 - Mir6949 miRNA miRNA MGP_129S1SvImJ_T0002561.1 MGP_129S1SvImJ_G0002464.1 mouse_genomes_project 14 48122767 48122827 + MGP_129S1SvImJ_P0002561 Traj26 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0040250.1 MGP_129S1SvImJ_G0021612.1 mouse_genomes_project 14 92224692 92666091 - MGP_129S1SvImJ_P0040250 Klhl1 protein_coding protein_coding MGP_129S1SvImJ_T0039568.1 MGP_129S1SvImJ_G0021354.1 mouse_genomes_project 14 49628222 49640214 + MGP_129S1SvImJ_P0039568 Rnf31 protein_coding protein_coding MGP_129S1SvImJ_T0039569.1 MGP_129S1SvImJ_G0021354.1 mouse_genomes_project 14 49628258 49634177 + MGP_129S1SvImJ_P0039569 Rnf31 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039570.1 MGP_129S1SvImJ_G0021354.1 mouse_genomes_project 14 49628789 49640185 + MGP_129S1SvImJ_P0039570 Rnf31 protein_coding protein_coding MGP_129S1SvImJ_T0039571.1 MGP_129S1SvImJ_G0021354.1 mouse_genomes_project 14 49628981 49629469 + Rnf31 protein_coding retained_intron MGP_129S1SvImJ_T0039572.1 MGP_129S1SvImJ_G0021354.1 mouse_genomes_project 14 49634905 49635471 + Rnf31 protein_coding retained_intron MGP_129S1SvImJ_T0040081.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67881756 67898239 + Rcbtb2 protein_coding retained_intron MGP_129S1SvImJ_T0040082.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67881756 67905259 + MGP_129S1SvImJ_P0040082 Rcbtb2 protein_coding protein_coding MGP_129S1SvImJ_T0040083.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67885516 67907648 + MGP_129S1SvImJ_P0040083 Rcbtb2 protein_coding protein_coding MGP_129S1SvImJ_T0040084.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67885538 67909429 + MGP_129S1SvImJ_P0040084 Rcbtb2 protein_coding protein_coding MGP_129S1SvImJ_T0040085.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67885687 67898238 + Rcbtb2 protein_coding retained_intron MGP_129S1SvImJ_T0040086.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67885703 67905310 + MGP_129S1SvImJ_P0040086 Rcbtb2 protein_coding protein_coding MGP_129S1SvImJ_T0040087.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67885843 67944712 + MGP_129S1SvImJ_P0040087 Rcbtb2 protein_coding protein_coding MGP_129S1SvImJ_T0040088.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67885972 67907712 + MGP_129S1SvImJ_P0040088 Rcbtb2 protein_coding protein_coding MGP_129S1SvImJ_T0040089.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67885989 67907006 + Rcbtb2 protein_coding retained_intron MGP_129S1SvImJ_T0040090.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67885997 67897809 + Rcbtb2 protein_coding retained_intron MGP_129S1SvImJ_T0040091.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67886042 67928410 + MGP_129S1SvImJ_P0040091 Rcbtb2 protein_coding protein_coding MGP_129S1SvImJ_T0040092.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67886056 67927525 + MGP_129S1SvImJ_P0040092 Rcbtb2 protein_coding protein_coding MGP_129S1SvImJ_T0040093.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67886079 67928581 + MGP_129S1SvImJ_P0040093 Rcbtb2 protein_coding protein_coding MGP_129S1SvImJ_T0040094.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67886090 67898192 + Rcbtb2 protein_coding retained_intron MGP_129S1SvImJ_T0040095.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67886090 67909762 + MGP_129S1SvImJ_P0040095 Rcbtb2 protein_coding protein_coding MGP_129S1SvImJ_T0040096.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67886096 67928423 + MGP_129S1SvImJ_P0040096 Rcbtb2 protein_coding protein_coding MGP_129S1SvImJ_T0040097.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67886137 67907779 + MGP_129S1SvImJ_P0040097 Rcbtb2 protein_coding protein_coding MGP_129S1SvImJ_T0040098.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67886380 67904890 + MGP_129S1SvImJ_P0040098 Rcbtb2 protein_coding protein_coding MGP_129S1SvImJ_T0040099.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67904860 67926961 + MGP_129S1SvImJ_P0040099 Rcbtb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040100.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67904860 67926958 + MGP_129S1SvImJ_P0040100 Rcbtb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040101.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67918251 67926877 + MGP_129S1SvImJ_P0040101 Rcbtb2 protein_coding protein_coding MGP_129S1SvImJ_T0040102.1 MGP_129S1SvImJ_G0021554.1 mouse_genomes_project 14 67918812 67927041 + Rcbtb2 protein_coding retained_intron MGP_129S1SvImJ_T0040218.1 MGP_129S1SvImJ_G0021601.1 mouse_genomes_project 14 74719992 74774225 + MGP_129S1SvImJ_P0040218 Sugt1 protein_coding protein_coding MGP_129S1SvImJ_T0040241.1 MGP_129S1SvImJ_G0021610.1 mouse_genomes_project 14 88874902 89814755 - MGP_129S1SvImJ_P0040241 Pcdh9 protein_coding protein_coding MGP_129S1SvImJ_T0040242.1 MGP_129S1SvImJ_G0021610.1 mouse_genomes_project 14 88875194 89814755 - MGP_129S1SvImJ_P0040242 Pcdh9 protein_coding protein_coding MGP_129S1SvImJ_T0040243.1 MGP_129S1SvImJ_G0021610.1 mouse_genomes_project 14 88875467 89814715 - MGP_129S1SvImJ_P0040243 Pcdh9 protein_coding protein_coding MGP_129S1SvImJ_T0040244.1 MGP_129S1SvImJ_G0021610.1 mouse_genomes_project 14 88875691 89814245 - MGP_129S1SvImJ_P0040244 Pcdh9 protein_coding protein_coding MGP_129S1SvImJ_T0040245.1 MGP_129S1SvImJ_G0021610.1 mouse_genomes_project 14 88877004 89812818 - MGP_129S1SvImJ_P0040245 Pcdh9 protein_coding protein_coding MGP_129S1SvImJ_T0040246.1 MGP_129S1SvImJ_G0021610.1 mouse_genomes_project 14 89044801 89809834 - MGP_129S1SvImJ_P0040246 Pcdh9 protein_coding protein_coding MGP_129S1SvImJ_T0040247.1 MGP_129S1SvImJ_G0021610.1 mouse_genomes_project 14 89809654 89810310 - Pcdh9 protein_coding retained_intron MGP_129S1SvImJ_T0040248.1 MGP_129S1SvImJ_G0021610.1 mouse_genomes_project 14 89810198 89814765 - MGP_129S1SvImJ_P0040248 Pcdh9 protein_coding protein_coding MGP_129S1SvImJ_T0002693.1 MGP_129S1SvImJ_G0002575.1 mouse_genomes_project 14 48075523 48076156 - MGP_129S1SvImJ_P0002693 Trdv5 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0040262.1 MGP_129S1SvImJ_G0021621.1 mouse_genomes_project 14 97850709 98031633 - MGP_129S1SvImJ_P0040262 Tbc1d4 protein_coding protein_coding MGP_129S1SvImJ_T0040263.1 MGP_129S1SvImJ_G0021621.1 mouse_genomes_project 14 97850717 97878511 - Tbc1d4 protein_coding retained_intron MGP_129S1SvImJ_T0040264.1 MGP_129S1SvImJ_G0021621.1 mouse_genomes_project 14 97850717 97924137 - MGP_129S1SvImJ_P0040264 Tbc1d4 protein_coding protein_coding MGP_129S1SvImJ_T0040265.1 MGP_129S1SvImJ_G0021621.1 mouse_genomes_project 14 97853879 98031086 - MGP_129S1SvImJ_P0040265 Tbc1d4 protein_coding protein_coding MGP_129S1SvImJ_T0040266.1 MGP_129S1SvImJ_G0021621.1 mouse_genomes_project 14 97854694 98030901 - MGP_129S1SvImJ_P0040266 Tbc1d4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040267.1 MGP_129S1SvImJ_G0021621.1 mouse_genomes_project 14 97877859 98031432 - Tbc1d4 protein_coding retained_intron MGP_129S1SvImJ_T0040268.1 MGP_129S1SvImJ_G0021621.1 mouse_genomes_project 14 97878081 98031267 - Tbc1d4 protein_coding retained_intron MGP_129S1SvImJ_T0040269.1 MGP_129S1SvImJ_G0021621.1 mouse_genomes_project 14 97878081 98031267 - Tbc1d4 protein_coding retained_intron MGP_129S1SvImJ_T0040270.1 MGP_129S1SvImJ_G0021621.1 mouse_genomes_project 14 97878250 97917918 - MGP_129S1SvImJ_P0040270 Tbc1d4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040271.1 MGP_129S1SvImJ_G0021621.1 mouse_genomes_project 14 97878261 98031791 - MGP_129S1SvImJ_P0040271 Tbc1d4 protein_coding protein_coding MGP_129S1SvImJ_T0040272.1 MGP_129S1SvImJ_G0021621.1 mouse_genomes_project 14 97921517 97924081 - Tbc1d4 protein_coding retained_intron MGP_129S1SvImJ_T0040296.1 MGP_129S1SvImJ_G0021627.1 mouse_genomes_project 14 99533733 99544184 + MGP_129S1SvImJ_P0040296 Acod1 protein_coding protein_coding MGP_129S1SvImJ_T0003594.1 MGP_129S1SvImJ_G0003263.1 mouse_genomes_project 14 64029807 64032654 + Gm27222 antisense antisense MGP_129S1SvImJ_T0038342.1 MGP_129S1SvImJ_G0021010.1 mouse_genomes_project 14 6928795 6929895 + MGP_129S1SvImJ_P0038342 Olfr721-ps1 protein_coding protein_coding MGP_129S1SvImJ_T0038343.1 MGP_129S1SvImJ_G0021010.1 mouse_genomes_project 14 6928920 6929895 + MGP_129S1SvImJ_P0038343 Olfr721-ps1 protein_coding protein_coding MGP_129S1SvImJ_T0039793.1 MGP_129S1SvImJ_G0021441.1 mouse_genomes_project 14 55745324 55826086 - MGP_129S1SvImJ_P0039793 Kpna3 protein_coding protein_coding MGP_129S1SvImJ_T0003558.1 MGP_129S1SvImJ_G0003233.1 mouse_genomes_project 14 25532839 25534890 - Gm17210 antisense antisense MGP_129S1SvImJ_T0002632.1 MGP_129S1SvImJ_G0002527.1 mouse_genomes_project 14 46768256 46769884 + MGP_129S1SvImJ_P0002632 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002633.1 MGP_129S1SvImJ_G0002527.1 mouse_genomes_project 14 46769577 46769884 + MGP_129S1SvImJ_P0002633 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0038337.1 MGP_129S1SvImJ_G0021007.1 mouse_genomes_project 14 6696508 6697531 - MGP_129S1SvImJ_P0038337 Olfr720 protein_coding protein_coding MGP_129S1SvImJ_T0038338.1 MGP_129S1SvImJ_G0021007.1 mouse_genomes_project 14 6697110 6707852 - MGP_129S1SvImJ_P0038338 Olfr720 protein_coding protein_coding MGP_129S1SvImJ_T0039780.1 MGP_129S1SvImJ_G0021436.1 mouse_genomes_project 14 55317176 55396871 - MGP_129S1SvImJ_P0039780 Tnfrsf19 protein_coding protein_coding MGP_129S1SvImJ_T0039781.1 MGP_129S1SvImJ_G0021436.1 mouse_genomes_project 14 55317176 55406979 - MGP_129S1SvImJ_P0039781 Tnfrsf19 protein_coding protein_coding MGP_129S1SvImJ_T0040239.1 MGP_129S1SvImJ_G0021609.1 mouse_genomes_project 14 84004165 84010822 - MGP_129S1SvImJ_P0040239 Pcdh20 protein_coding protein_coding MGP_129S1SvImJ_T0040240.1 MGP_129S1SvImJ_G0021609.1 mouse_genomes_project 14 84006279 84010772 - MGP_129S1SvImJ_P0040240 Pcdh20 protein_coding protein_coding MGP_129S1SvImJ_T0039631.1 MGP_129S1SvImJ_G0021370.1 mouse_genomes_project 14 49808394 49812290 + MGP_129S1SvImJ_P0039631 Ltb4r1 protein_coding protein_coding MGP_129S1SvImJ_T0013023.1 MGP_129S1SvImJ_G0011112.1 mouse_genomes_project 14 48273776 48274460 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002674.1 MGP_129S1SvImJ_G0002560.1 mouse_genomes_project 14 47483635 47484322 + MGP_129S1SvImJ_P0002674 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002741.1 MGP_129S1SvImJ_G0002616.1 mouse_genomes_project 14 47499733 47500027 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0039842.1 MGP_129S1SvImJ_G0021463.1 mouse_genomes_project 14 58051045 58076839 - MGP_129S1SvImJ_P0039842 Mtmr9 protein_coding protein_coding MGP_129S1SvImJ_T0039230.1 MGP_129S1SvImJ_G0021281.1 mouse_genomes_project 14 45905357 45913579 + MGP_129S1SvImJ_P0039230 Mettl17 protein_coding protein_coding MGP_129S1SvImJ_T0039231.1 MGP_129S1SvImJ_G0021281.1 mouse_genomes_project 14 45905391 45913571 + Mettl17 protein_coding retained_intron MGP_129S1SvImJ_T0039232.1 MGP_129S1SvImJ_G0021281.1 mouse_genomes_project 14 45905393 45911300 + MGP_129S1SvImJ_P0039232 Mettl17 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039233.1 MGP_129S1SvImJ_G0021281.1 mouse_genomes_project 14 45905404 45913504 + Mettl17 protein_coding retained_intron MGP_129S1SvImJ_T0039234.1 MGP_129S1SvImJ_G0021281.1 mouse_genomes_project 14 45905404 45913504 + MGP_129S1SvImJ_P0039234 Mettl17 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039235.1 MGP_129S1SvImJ_G0021281.1 mouse_genomes_project 14 45905404 45913504 + MGP_129S1SvImJ_P0039235 Mettl17 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039236.1 MGP_129S1SvImJ_G0021281.1 mouse_genomes_project 14 45905427 45911018 + Mettl17 protein_coding retained_intron MGP_129S1SvImJ_T0039237.1 MGP_129S1SvImJ_G0021281.1 mouse_genomes_project 14 45905433 45906174 + Mettl17 protein_coding retained_intron MGP_129S1SvImJ_T0039238.1 MGP_129S1SvImJ_G0021281.1 mouse_genomes_project 14 45905450 45914589 + Mettl17 protein_coding retained_intron MGP_129S1SvImJ_T0039239.1 MGP_129S1SvImJ_G0021281.1 mouse_genomes_project 14 45905453 45910614 + Mettl17 protein_coding retained_intron MGP_129S1SvImJ_T0039240.1 MGP_129S1SvImJ_G0021281.1 mouse_genomes_project 14 45905461 45913446 + MGP_129S1SvImJ_P0039240 Mettl17 protein_coding protein_coding MGP_129S1SvImJ_T0039241.1 MGP_129S1SvImJ_G0021281.1 mouse_genomes_project 14 45905461 45910614 + MGP_129S1SvImJ_P0039241 Mettl17 protein_coding protein_coding MGP_129S1SvImJ_T0039242.1 MGP_129S1SvImJ_G0021281.1 mouse_genomes_project 14 45905467 45907769 + Mettl17 protein_coding retained_intron MGP_129S1SvImJ_T0039243.1 MGP_129S1SvImJ_G0021281.1 mouse_genomes_project 14 45905469 45906178 + Mettl17 protein_coding retained_intron MGP_129S1SvImJ_T0039244.1 MGP_129S1SvImJ_G0021281.1 mouse_genomes_project 14 45905917 45912438 + MGP_129S1SvImJ_P0039244 Mettl17 protein_coding protein_coding MGP_129S1SvImJ_T0039245.1 MGP_129S1SvImJ_G0021281.1 mouse_genomes_project 14 45907675 45910729 + Mettl17 protein_coding retained_intron MGP_129S1SvImJ_T0039649.1 MGP_129S1SvImJ_G0021381.1 mouse_genomes_project 14 50136488 50139055 - MGP_129S1SvImJ_P0039649 Mcpt4 protein_coding protein_coding MGP_129S1SvImJ_T0039919.1 MGP_129S1SvImJ_G0021495.1 mouse_genomes_project 14 61017192 61029666 + MGP_129S1SvImJ_P0039919 Stmn4 protein_coding protein_coding MGP_129S1SvImJ_T0039920.1 MGP_129S1SvImJ_G0021495.1 mouse_genomes_project 14 61017200 61034624 + MGP_129S1SvImJ_P0039920 Stmn4 protein_coding protein_coding MGP_129S1SvImJ_T0039921.1 MGP_129S1SvImJ_G0021495.1 mouse_genomes_project 14 61017263 61028763 + Stmn4 protein_coding retained_intron MGP_129S1SvImJ_T0039922.1 MGP_129S1SvImJ_G0021495.1 mouse_genomes_project 14 61017263 61028552 + Stmn4 protein_coding processed_transcript MGP_129S1SvImJ_T0039923.1 MGP_129S1SvImJ_G0021495.1 mouse_genomes_project 14 61017269 61034618 + MGP_129S1SvImJ_P0039923 Stmn4 protein_coding protein_coding MGP_129S1SvImJ_T0039924.1 MGP_129S1SvImJ_G0021495.1 mouse_genomes_project 14 61017270 61034618 + MGP_129S1SvImJ_P0039924 Stmn4 protein_coding protein_coding MGP_129S1SvImJ_T0039925.1 MGP_129S1SvImJ_G0021495.1 mouse_genomes_project 14 61017271 61034592 + MGP_129S1SvImJ_P0039925 Stmn4 protein_coding protein_coding MGP_129S1SvImJ_T0039926.1 MGP_129S1SvImJ_G0021495.1 mouse_genomes_project 14 61017274 61029671 + MGP_129S1SvImJ_P0039926 Stmn4 protein_coding protein_coding MGP_129S1SvImJ_T0039927.1 MGP_129S1SvImJ_G0021495.1 mouse_genomes_project 14 61017277 61031011 + Stmn4 protein_coding retained_intron MGP_129S1SvImJ_T0010034.1 MGP_129S1SvImJ_G0008150.1 mouse_genomes_project 14 105123910 105124071 + Gm24818 miRNA miRNA MGP_129S1SvImJ_T0040001.1 MGP_129S1SvImJ_G0021524.1 mouse_genomes_project 14 64295756 64317667 - MGP_129S1SvImJ_P0040001 Chmp7 protein_coding protein_coding MGP_129S1SvImJ_T0039070.1 MGP_129S1SvImJ_G0021218.1 mouse_genomes_project 14 40874710 40910996 - MGP_129S1SvImJ_P0039070 Gch1 protein_coding protein_coding MGP_129S1SvImJ_T0039662.1 MGP_129S1SvImJ_G0021394.1 mouse_genomes_project 14 50617812 50663072 - MGP_129S1SvImJ_P0039662 Cenpj protein_coding protein_coding MGP_129S1SvImJ_T0039663.1 MGP_129S1SvImJ_G0021394.1 mouse_genomes_project 14 50617834 50666773 - MGP_129S1SvImJ_P0039663 Cenpj protein_coding unknown_likely_coding MGP_129S1SvImJ_T0039664.1 MGP_129S1SvImJ_G0021394.1 mouse_genomes_project 14 50617834 50656236 - MGP_129S1SvImJ_P0039664 Cenpj protein_coding unknown_likely_coding MGP_129S1SvImJ_T0039693.1 MGP_129S1SvImJ_G0021409.1 mouse_genomes_project 14 51778547 51872552 - MGP_129S1SvImJ_P0039693 Xpo4 protein_coding protein_coding MGP_129S1SvImJ_T0039694.1 MGP_129S1SvImJ_G0021409.1 mouse_genomes_project 14 51783252 51872552 - MGP_129S1SvImJ_P0039694 Xpo4 protein_coding protein_coding MGP_129S1SvImJ_T0039695.1 MGP_129S1SvImJ_G0021409.1 mouse_genomes_project 14 51797640 51872588 - MGP_129S1SvImJ_P0039695 Xpo4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039696.1 MGP_129S1SvImJ_G0021409.1 mouse_genomes_project 14 51833695 51872552 - MGP_129S1SvImJ_P0039696 Xpo4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039697.1 MGP_129S1SvImJ_G0021409.1 mouse_genomes_project 14 51846025 51872560 - Xpo4 protein_coding processed_transcript MGP_129S1SvImJ_T0039698.1 MGP_129S1SvImJ_G0021409.1 mouse_genomes_project 14 51846031 51872831 - Xpo4 protein_coding retained_intron MGP_129S1SvImJ_T0039699.1 MGP_129S1SvImJ_G0021409.1 mouse_genomes_project 14 51846046 51872563 - Xpo4 protein_coding retained_intron MGP_129S1SvImJ_T0039700.1 MGP_129S1SvImJ_G0021409.1 mouse_genomes_project 14 51846275 51873026 - MGP_129S1SvImJ_P0039700 Xpo4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039702.1 MGP_129S1SvImJ_G0021409.1 mouse_genomes_project 14 51846762 51852904 - Xpo4 protein_coding retained_intron MGP_129S1SvImJ_T0039703.1 MGP_129S1SvImJ_G0021409.1 mouse_genomes_project 14 51852208 51872585 - Xpo4 protein_coding retained_intron MGP_129S1SvImJ_T0002517.1 MGP_129S1SvImJ_G0002425.1 mouse_genomes_project 14 48047183 48047192 + MGP_129S1SvImJ_P0002517 Trdd1 TR_D_gene TR_D_gene MGP_129S1SvImJ_T0002518.1 MGP_129S1SvImJ_G0002425.1 mouse_genomes_project 14 48047183 48047194 + Trdd1 TR_D_gene processed_transcript MGP_129S1SvImJ_T0013059.1 MGP_129S1SvImJ_G0011148.1 mouse_genomes_project 14 101872089 101872646 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002559.1 MGP_129S1SvImJ_G0002462.1 mouse_genomes_project 14 48119963 48120028 + MGP_129S1SvImJ_P0002559 Traj28 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0002635.1 MGP_129S1SvImJ_G0002528.1 mouse_genomes_project 14 46800064 46800544 + MGP_129S1SvImJ_P0002635 Trav6d-4 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002636.1 MGP_129S1SvImJ_G0002528.1 mouse_genomes_project 14 46800095 46800544 + MGP_129S1SvImJ_P0002636 Trav6d-4 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0039647.1 MGP_129S1SvImJ_G0021379.1 mouse_genomes_project 14 50091449 50093877 + MGP_129S1SvImJ_P0039647 Mcpt1 protein_coding protein_coding MGP_129S1SvImJ_T0038440.1 MGP_129S1SvImJ_G0021041.1 mouse_genomes_project 14 13424646 13434006 - MGP_129S1SvImJ_P0038440 Synpo2l protein_coding protein_coding MGP_129S1SvImJ_T0038441.1 MGP_129S1SvImJ_G0021041.1 mouse_genomes_project 14 13424648 13430275 - MGP_129S1SvImJ_P0038441 Synpo2l protein_coding protein_coding MGP_129S1SvImJ_T0038442.1 MGP_129S1SvImJ_G0021041.1 mouse_genomes_project 14 13425118 13434053 - MGP_129S1SvImJ_P0038442 Synpo2l protein_coding protein_coding MGP_129S1SvImJ_T0039178.1 MGP_129S1SvImJ_G0021252.1 mouse_genomes_project 14 44549871 44550976 + MGP_129S1SvImJ_P0039178 Olfr744 protein_coding protein_coding MGP_129S1SvImJ_T0002747.1 MGP_129S1SvImJ_G0002622.1 mouse_genomes_project 14 47930770 47931073 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0039391.1 MGP_129S1SvImJ_G0021309.1 mouse_genomes_project 14 48377409 48386894 + MGP_129S1SvImJ_P0039391 Mmp14 protein_coding protein_coding MGP_129S1SvImJ_T0039392.1 MGP_129S1SvImJ_G0021309.1 mouse_genomes_project 14 48377420 48382003 + MGP_129S1SvImJ_P0039392 Mmp14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039393.1 MGP_129S1SvImJ_G0021309.1 mouse_genomes_project 14 48377461 48381975 + Mmp14 protein_coding retained_intron MGP_129S1SvImJ_T0039394.1 MGP_129S1SvImJ_G0021309.1 mouse_genomes_project 14 48377515 48379063 + Mmp14 protein_coding retained_intron MGP_129S1SvImJ_T0039395.1 MGP_129S1SvImJ_G0021309.1 mouse_genomes_project 14 48377663 48386325 + MGP_129S1SvImJ_P0039395 Mmp14 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0039396.1 MGP_129S1SvImJ_G0021309.1 mouse_genomes_project 14 48378233 48381686 + MGP_129S1SvImJ_P0039396 Mmp14 protein_coding protein_coding MGP_129S1SvImJ_T0006708.1 MGP_129S1SvImJ_G0005547.1 mouse_genomes_project 14 45347632 45352452 + lincRNA lincRNA MGP_129S1SvImJ_T0006709.1 MGP_129S1SvImJ_G0005547.1 mouse_genomes_project 14 45347696 45352324 + lincRNA lincRNA MGP_129S1SvImJ_T0002539.1 MGP_129S1SvImJ_G0002443.1 mouse_genomes_project 14 48098203 48098264 + MGP_129S1SvImJ_P0002539 Traj48 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0002540.1 MGP_129S1SvImJ_G0002443.1 mouse_genomes_project 14 48098204 48098264 + Traj48 TR_J_gene processed_transcript MGP_129S1SvImJ_T0039812.1 MGP_129S1SvImJ_G0021450.1 mouse_genomes_project 14 57303691 57431155 + MGP_129S1SvImJ_P0039812 Wdfy2 protein_coding protein_coding MGP_129S1SvImJ_T0038620.1 MGP_129S1SvImJ_G0021085.1 mouse_genomes_project 14 19674226 19804720 + MGP_129S1SvImJ_P0038620 Dnah12 protein_coding protein_coding MGP_129S1SvImJ_T0038621.1 MGP_129S1SvImJ_G0021085.1 mouse_genomes_project 14 19674398 19880316 + MGP_129S1SvImJ_P0038621 Dnah12 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0038622.1 MGP_129S1SvImJ_G0021085.1 mouse_genomes_project 14 19757385 19760129 + MGP_129S1SvImJ_P0038622 Dnah12 protein_coding protein_coding MGP_129S1SvImJ_T0038623.1 MGP_129S1SvImJ_G0021085.1 mouse_genomes_project 14 19820741 19880385 + MGP_129S1SvImJ_P0038623 Dnah12 protein_coding protein_coding MGP_129S1SvImJ_T0039176.1 MGP_129S1SvImJ_G0021250.1 mouse_genomes_project 14 44370783 44372721 + MGP_129S1SvImJ_P0039176 Olfr740 protein_coding protein_coding MGP_129S1SvImJ_T0002640.1 MGP_129S1SvImJ_G0002532.1 mouse_genomes_project 14 46844119 46844643 + MGP_129S1SvImJ_P0002640 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0039723.1 MGP_129S1SvImJ_G0021416.1 mouse_genomes_project 14 52309930 52353842 + MGP_129S1SvImJ_P0039723 Fgf9 protein_coding protein_coding MGP_129S1SvImJ_T0039724.1 MGP_129S1SvImJ_G0021416.1 mouse_genomes_project 14 52312214 52350603 + MGP_129S1SvImJ_P0039724 Fgf9 protein_coding protein_coding MGP_129S1SvImJ_T0039725.1 MGP_129S1SvImJ_G0021416.1 mouse_genomes_project 14 52314643 52350603 + MGP_129S1SvImJ_P0039725 Fgf9 protein_coding protein_coding MGP_129S1SvImJ_T0039726.1 MGP_129S1SvImJ_G0021416.1 mouse_genomes_project 14 52315863 52349827 + MGP_129S1SvImJ_P0039726 Fgf9 protein_coding protein_coding MGP_129S1SvImJ_T0002651.1 MGP_129S1SvImJ_G0002543.1 mouse_genomes_project 14 47026070 47026664 + MGP_129S1SvImJ_P0002651 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002652.1 MGP_129S1SvImJ_G0002543.1 mouse_genomes_project 14 47026132 47026664 + MGP_129S1SvImJ_P0002652 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002545.1 MGP_129S1SvImJ_G0002448.1 mouse_genomes_project 14 48103121 48103178 + MGP_129S1SvImJ_P0002545 Traj43 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0009991.1 MGP_129S1SvImJ_G0008107.1 mouse_genomes_project 14 14870391 14870504 - Gm27532 miRNA miRNA MGP_129S1SvImJ_T0013066.1 MGP_129S1SvImJ_G0011155.1 mouse_genomes_project 14 121634976 121635190 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039791.1 MGP_129S1SvImJ_G0021439.1 mouse_genomes_project 14 55686580 55688742 + MGP_129S1SvImJ_P0039791 Arl11 protein_coding protein_coding MGP_129S1SvImJ_T0013013.1 MGP_129S1SvImJ_G0011102.1 mouse_genomes_project 14 44713231 44715030 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038746.1 MGP_129S1SvImJ_G0021119.1 mouse_genomes_project 14 24301971 24311459 + MGP_129S1SvImJ_P0038746 Nt5dc2 protein_coding protein_coding MGP_129S1SvImJ_T0102249.1 MGP_129S1SvImJ_G0040083.1 mouse_genomes_project 14 46611173 46614113 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0003536.1 MGP_129S1SvImJ_G0003220.1 mouse_genomes_project 14 4372865 4389670 - Gm3848 antisense antisense MGP_129S1SvImJ_T0003537.1 MGP_129S1SvImJ_G0003220.1 mouse_genomes_project 14 4388658 4389655 - Gm3848 antisense antisense MGP_129S1SvImJ_T0039827.1 MGP_129S1SvImJ_G0021458.1 mouse_genomes_project 14 57673045 57684130 - MGP_129S1SvImJ_P0039827 Neil2 protein_coding protein_coding MGP_129S1SvImJ_T0002627.1 MGP_129S1SvImJ_G0002523.1 mouse_genomes_project 14 46722059 46722513 + MGP_129S1SvImJ_P0002627 Trav6-2 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002628.1 MGP_129S1SvImJ_G0002523.1 mouse_genomes_project 14 46722059 46722513 + MGP_129S1SvImJ_P0002628 Trav6-2 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0038422.1 MGP_129S1SvImJ_G0021036.1 mouse_genomes_project 14 13214533 13240809 - MGP_129S1SvImJ_P0038422 Anxa7 protein_coding protein_coding MGP_129S1SvImJ_T0038423.1 MGP_129S1SvImJ_G0021036.1 mouse_genomes_project 14 13214533 13240809 - MGP_129S1SvImJ_P0038423 Anxa7 protein_coding protein_coding MGP_129S1SvImJ_T0038424.1 MGP_129S1SvImJ_G0021036.1 mouse_genomes_project 14 13214550 13240799 - MGP_129S1SvImJ_P0038424 Anxa7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0002573.1 MGP_129S1SvImJ_G0002476.1 mouse_genomes_project 14 48134026 48134083 + MGP_129S1SvImJ_P0002573 Traj13 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0038888.1 MGP_129S1SvImJ_G0021150.1 mouse_genomes_project 14 26054046 26087068 + MGP_129S1SvImJ_P0038888 1810011H11Rik protein_coding protein_coding MGP_129S1SvImJ_T0039179.1 MGP_129S1SvImJ_G0021253.1 mouse_genomes_project 14 44569452 44570625 + MGP_129S1SvImJ_P0039179 Olfr745 protein_coding protein_coding MGP_129S1SvImJ_T0010004.1 MGP_129S1SvImJ_G0008120.1 mouse_genomes_project 14 48579412 48579521 - Mir686 miRNA miRNA MGP_129S1SvImJ_T0038789.1 MGP_129S1SvImJ_G0021125.1 mouse_genomes_project 14 24427499 24435993 + MGP_129S1SvImJ_P0038789 Bap1 protein_coding protein_coding MGP_129S1SvImJ_T0038790.1 MGP_129S1SvImJ_G0021125.1 mouse_genomes_project 14 24427552 24429064 + Bap1 protein_coding retained_intron MGP_129S1SvImJ_T0038791.1 MGP_129S1SvImJ_G0021125.1 mouse_genomes_project 14 24427560 24430251 + Bap1 protein_coding retained_intron MGP_129S1SvImJ_T0038792.1 MGP_129S1SvImJ_G0021125.1 mouse_genomes_project 14 24427587 24435979 + Bap1 protein_coding retained_intron MGP_129S1SvImJ_T0038793.1 MGP_129S1SvImJ_G0021125.1 mouse_genomes_project 14 24427629 24431187 + MGP_129S1SvImJ_P0038793 Bap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038794.1 MGP_129S1SvImJ_G0021125.1 mouse_genomes_project 14 24432317 24434573 + MGP_129S1SvImJ_P0038794 Bap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038795.1 MGP_129S1SvImJ_G0021125.1 mouse_genomes_project 14 24432587 24433690 + Bap1 protein_coding retained_intron MGP_129S1SvImJ_T0038796.1 MGP_129S1SvImJ_G0021125.1 mouse_genomes_project 14 24433539 24434937 + Bap1 protein_coding retained_intron MGP_129S1SvImJ_T0039026.1 MGP_129S1SvImJ_G0021206.1 mouse_genomes_project 14 38901182 38939913 - MGP_129S1SvImJ_P0039026 Ero1l protein_coding protein_coding MGP_129S1SvImJ_T0010020.1 MGP_129S1SvImJ_G0008136.1 mouse_genomes_project 14 62607621 62607731 - Mir6539 miRNA miRNA MGP_129S1SvImJ_T0102235.1 MGP_129S1SvImJ_G0040069.1 mouse_genomes_project 14 18820034 18827634 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0038992.1 MGP_129S1SvImJ_G0021193.1 mouse_genomes_project 14 34627346 34647421 - MGP_129S1SvImJ_P0038992 Fam213a protein_coding protein_coding MGP_129S1SvImJ_T0038993.1 MGP_129S1SvImJ_G0021193.1 mouse_genomes_project 14 34628144 34638150 - MGP_129S1SvImJ_P0038993 Fam213a protein_coding protein_coding MGP_129S1SvImJ_T0038994.1 MGP_129S1SvImJ_G0021193.1 mouse_genomes_project 14 34631346 34638596 - MGP_129S1SvImJ_P0038994 Fam213a protein_coding protein_coding MGP_129S1SvImJ_T0038995.1 MGP_129S1SvImJ_G0021193.1 mouse_genomes_project 14 34632491 34636721 - Fam213a protein_coding retained_intron MGP_129S1SvImJ_T0038996.1 MGP_129S1SvImJ_G0021193.1 mouse_genomes_project 14 34632529 34640593 - MGP_129S1SvImJ_P0038996 Fam213a protein_coding protein_coding MGP_129S1SvImJ_T0038997.1 MGP_129S1SvImJ_G0021193.1 mouse_genomes_project 14 34632571 34647388 - MGP_129S1SvImJ_P0038997 Fam213a protein_coding protein_coding MGP_129S1SvImJ_T0038998.1 MGP_129S1SvImJ_G0021193.1 mouse_genomes_project 14 34637657 34640537 - MGP_129S1SvImJ_P0038998 Fam213a protein_coding protein_coding MGP_129S1SvImJ_T0040278.1 MGP_129S1SvImJ_G0021625.1 mouse_genomes_project 14 98165989 98379299 + MGP_129S1SvImJ_P0040278 Lmo7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040279.1 MGP_129S1SvImJ_G0021625.1 mouse_genomes_project 14 98270972 98322077 + Lmo7 protein_coding processed_transcript MGP_129S1SvImJ_T0040280.1 MGP_129S1SvImJ_G0021625.1 mouse_genomes_project 14 98280408 98379294 + MGP_129S1SvImJ_P0040280 Lmo7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040281.1 MGP_129S1SvImJ_G0021625.1 mouse_genomes_project 14 98282193 98325663 + Lmo7 protein_coding processed_transcript MGP_129S1SvImJ_T0040282.1 MGP_129S1SvImJ_G0021625.1 mouse_genomes_project 14 98282403 98327082 + Lmo7 protein_coding retained_intron MGP_129S1SvImJ_T0040283.1 MGP_129S1SvImJ_G0021625.1 mouse_genomes_project 14 98282403 98339814 + MGP_129S1SvImJ_P0040283 Lmo7 protein_coding protein_coding MGP_129S1SvImJ_T0040284.1 MGP_129S1SvImJ_G0021625.1 mouse_genomes_project 14 98282544 98379292 + MGP_129S1SvImJ_P0040284 Lmo7 protein_coding protein_coding MGP_129S1SvImJ_T0040285.1 MGP_129S1SvImJ_G0021625.1 mouse_genomes_project 14 98282715 98354752 + Lmo7 protein_coding retained_intron MGP_129S1SvImJ_T0040286.1 MGP_129S1SvImJ_G0021625.1 mouse_genomes_project 14 98310640 98325466 + Lmo7 protein_coding processed_transcript MGP_129S1SvImJ_T0040287.1 MGP_129S1SvImJ_G0021625.1 mouse_genomes_project 14 98317999 98379131 + MGP_129S1SvImJ_P0040287 Lmo7 protein_coding protein_coding MGP_129S1SvImJ_T0040288.1 MGP_129S1SvImJ_G0021625.1 mouse_genomes_project 14 98322086 98378800 + MGP_129S1SvImJ_P0040288 Lmo7 protein_coding protein_coding MGP_129S1SvImJ_T0040289.1 MGP_129S1SvImJ_G0021625.1 mouse_genomes_project 14 98325335 98342101 + Lmo7 protein_coding retained_intron MGP_129S1SvImJ_T0040290.1 MGP_129S1SvImJ_G0021625.1 mouse_genomes_project 14 98325367 98329449 + Lmo7 protein_coding retained_intron MGP_129S1SvImJ_T0040291.1 MGP_129S1SvImJ_G0021625.1 mouse_genomes_project 14 98362272 98373948 + Lmo7 protein_coding retained_intron MGP_129S1SvImJ_T0040292.1 MGP_129S1SvImJ_G0021625.1 mouse_genomes_project 14 98369488 98376325 + Lmo7 protein_coding processed_transcript MGP_129S1SvImJ_T0040293.1 MGP_129S1SvImJ_G0021625.1 mouse_genomes_project 14 98372448 98376054 + Lmo7 protein_coding processed_transcript MGP_129S1SvImJ_T0039975.1 MGP_129S1SvImJ_G0021513.1 mouse_genomes_project 14 63796665 63808899 + MGP_129S1SvImJ_P0039975 Stc1 protein_coding protein_coding MGP_129S1SvImJ_T0039680.1 MGP_129S1SvImJ_G0021402.1 mouse_genomes_project 14 51255659 51261744 - MGP_129S1SvImJ_P0039680 Gjb2 protein_coding protein_coding MGP_129S1SvImJ_T0099392.1 MGP_129S1SvImJ_G0037459.1 mouse_genomes_project 14 34041942 34042049 + Gm24388 snRNA snRNA MGP_129S1SvImJ_T0012999.1 MGP_129S1SvImJ_G0011088.1 mouse_genomes_project 14 19332412 19333265 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100668.1 MGP_129S1SvImJ_G0038735.1 mouse_genomes_project 14 24181738 24181817 - Gm24916 snoRNA snoRNA MGP_129S1SvImJ_T0039317.1 MGP_129S1SvImJ_G0021294.1 mouse_genomes_project 14 46296010 46314120 - MGP_129S1SvImJ_P0039317 Rab2b protein_coding protein_coding MGP_129S1SvImJ_T0039318.1 MGP_129S1SvImJ_G0021294.1 mouse_genomes_project 14 46296017 46313873 - MGP_129S1SvImJ_P0039318 Rab2b protein_coding protein_coding MGP_129S1SvImJ_T0039319.1 MGP_129S1SvImJ_G0021294.1 mouse_genomes_project 14 46296020 46303735 - Rab2b protein_coding retained_intron MGP_129S1SvImJ_T0039320.1 MGP_129S1SvImJ_G0021294.1 mouse_genomes_project 14 46296022 46313914 - MGP_129S1SvImJ_P0039320 Rab2b protein_coding protein_coding MGP_129S1SvImJ_T0039321.1 MGP_129S1SvImJ_G0021294.1 mouse_genomes_project 14 46297974 46313240 - Rab2b protein_coding processed_transcript MGP_129S1SvImJ_T0039322.1 MGP_129S1SvImJ_G0021294.1 mouse_genomes_project 14 46297974 46313816 - MGP_129S1SvImJ_P0039322 Rab2b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039323.1 MGP_129S1SvImJ_G0021294.1 mouse_genomes_project 14 46297974 46313816 - MGP_129S1SvImJ_P0039323 Rab2b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039324.1 MGP_129S1SvImJ_G0021294.1 mouse_genomes_project 14 46299014 46309997 - MGP_129S1SvImJ_P0039324 Rab2b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039541.1 MGP_129S1SvImJ_G0021350.1 mouse_genomes_project 14 49610759 49612095 + MGP_129S1SvImJ_P0039541 Fitm1 protein_coding protein_coding MGP_129S1SvImJ_T0040437.1 MGP_129S1SvImJ_G0021679.1 mouse_genomes_project 14 121893852 122609944 - MGP_129S1SvImJ_P0040437 Fgf14 protein_coding protein_coding MGP_129S1SvImJ_T0040438.1 MGP_129S1SvImJ_G0021679.1 mouse_genomes_project 14 121894236 122128995 - MGP_129S1SvImJ_P0040438 Fgf14 protein_coding protein_coding MGP_129S1SvImJ_T0100695.1 MGP_129S1SvImJ_G0038762.1 mouse_genomes_project 14 78726375 78726509 + Gm24774 snoRNA snoRNA MGP_129S1SvImJ_T0038452.1 MGP_129S1SvImJ_G0021050.1 mouse_genomes_project 14 13831879 13852863 - MGP_129S1SvImJ_P0038452 Ap3m1 protein_coding protein_coding MGP_129S1SvImJ_T0038453.1 MGP_129S1SvImJ_G0021050.1 mouse_genomes_project 14 13831896 13835004 - Ap3m1 protein_coding processed_transcript MGP_129S1SvImJ_T0038454.1 MGP_129S1SvImJ_G0021050.1 mouse_genomes_project 14 13831971 13835218 - Ap3m1 protein_coding processed_transcript MGP_129S1SvImJ_T0038455.1 MGP_129S1SvImJ_G0021050.1 mouse_genomes_project 14 13836451 13852635 - MGP_129S1SvImJ_P0038455 Ap3m1 protein_coding protein_coding MGP_129S1SvImJ_T0038456.1 MGP_129S1SvImJ_G0021050.1 mouse_genomes_project 14 13838568 13852600 - MGP_129S1SvImJ_P0038456 Ap3m1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038457.1 MGP_129S1SvImJ_G0021050.1 mouse_genomes_project 14 13838612 13852876 - Ap3m1 protein_coding processed_transcript MGP_129S1SvImJ_T0038458.1 MGP_129S1SvImJ_G0021050.1 mouse_genomes_project 14 13841414 13852490 - Ap3m1 protein_coding processed_transcript MGP_129S1SvImJ_T0038459.1 MGP_129S1SvImJ_G0021050.1 mouse_genomes_project 14 13841441 13852921 - MGP_129S1SvImJ_P0038459 Ap3m1 protein_coding protein_coding MGP_129S1SvImJ_T0038460.1 MGP_129S1SvImJ_G0021050.1 mouse_genomes_project 14 13845078 13852533 - MGP_129S1SvImJ_P0038460 Ap3m1 protein_coding protein_coding MGP_129S1SvImJ_T0099415.1 MGP_129S1SvImJ_G0037482.1 mouse_genomes_project 14 89009632 89009792 - Gm23509 snRNA snRNA MGP_129S1SvImJ_T0006663.1 MGP_129S1SvImJ_G0005518.1 mouse_genomes_project 14 5634221 5754169 - lincRNA lincRNA MGP_129S1SvImJ_T0006664.1 MGP_129S1SvImJ_G0005518.1 mouse_genomes_project 14 5635407 5648104 - lincRNA lincRNA MGP_129S1SvImJ_T0006665.1 MGP_129S1SvImJ_G0005518.1 mouse_genomes_project 14 5733319 5754161 - lincRNA lincRNA MGP_129S1SvImJ_T0100709.1 MGP_129S1SvImJ_G0038776.1 mouse_genomes_project 14 97683683 97683819 + Gm26173 snoRNA snoRNA MGP_129S1SvImJ_T0040056.1 MGP_129S1SvImJ_G0021546.1 mouse_genomes_project 14 65261756 65292201 - MGP_129S1SvImJ_P0040056 Dmtn protein_coding protein_coding MGP_129S1SvImJ_T0040057.1 MGP_129S1SvImJ_G0021546.1 mouse_genomes_project 14 65261757 65289117 - MGP_129S1SvImJ_P0040057 Dmtn protein_coding protein_coding MGP_129S1SvImJ_T0040058.1 MGP_129S1SvImJ_G0021546.1 mouse_genomes_project 14 65261757 65297944 - MGP_129S1SvImJ_P0040058 Dmtn protein_coding protein_coding MGP_129S1SvImJ_T0040185.1 MGP_129S1SvImJ_G0021583.1 mouse_genomes_project 14 72029236 72090529 + MGP_129S1SvImJ_P0040185 Ccdc122 protein_coding protein_coding MGP_129S1SvImJ_T0040186.1 MGP_129S1SvImJ_G0021583.1 mouse_genomes_project 14 72029246 72090529 + MGP_129S1SvImJ_P0040186 Ccdc122 protein_coding protein_coding MGP_129S1SvImJ_T0040187.1 MGP_129S1SvImJ_G0021583.1 mouse_genomes_project 14 72029328 72090020 + MGP_129S1SvImJ_P0040187 Ccdc122 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040188.1 MGP_129S1SvImJ_G0021583.1 mouse_genomes_project 14 72089298 72090582 + Ccdc122 protein_coding processed_transcript MGP_129S1SvImJ_T0006670.1 MGP_129S1SvImJ_G0005522.1 mouse_genomes_project 14 17555306 17565913 - lincRNA lincRNA MGP_129S1SvImJ_T0006671.1 MGP_129S1SvImJ_G0005522.1 mouse_genomes_project 14 17563719 17565906 - lincRNA lincRNA MGP_129S1SvImJ_T0038543.1 MGP_129S1SvImJ_G0021063.1 mouse_genomes_project 14 17389383 17428908 - MGP_129S1SvImJ_P0038543 Polr3a protein_coding protein_coding MGP_129S1SvImJ_T0003550.1 MGP_129S1SvImJ_G0003226.1 mouse_genomes_project 14 15923453 15983508 - Gm10248 antisense antisense MGP_129S1SvImJ_T0038806.1 MGP_129S1SvImJ_G0021130.1 mouse_genomes_project 14 24683423 24698203 + MGP_129S1SvImJ_P0038806 Eaf1 protein_coding protein_coding MGP_129S1SvImJ_T0002602.1 MGP_129S1SvImJ_G0002503.1 mouse_genomes_project 14 48094638 48094681 + TR_J_pseudogene TR_J_pseudogene MGP_129S1SvImJ_T0002572.1 MGP_129S1SvImJ_G0002475.1 mouse_genomes_project 14 48132706 48132766 + MGP_129S1SvImJ_P0002572 Traj15 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0038944.1 MGP_129S1SvImJ_G0021175.1 mouse_genomes_project 14 27764995 27860795 - MGP_129S1SvImJ_P0038944 Bmpr1a protein_coding protein_coding MGP_129S1SvImJ_T0038945.1 MGP_129S1SvImJ_G0021175.1 mouse_genomes_project 14 27768748 27816842 - MGP_129S1SvImJ_P0038945 Bmpr1a protein_coding protein_coding MGP_129S1SvImJ_T0038946.1 MGP_129S1SvImJ_G0021175.1 mouse_genomes_project 14 27788711 27861456 - MGP_129S1SvImJ_P0038946 Bmpr1a protein_coding protein_coding MGP_129S1SvImJ_T0038947.1 MGP_129S1SvImJ_G0021175.1 mouse_genomes_project 14 27797597 27860633 - MGP_129S1SvImJ_P0038947 Bmpr1a protein_coding protein_coding MGP_129S1SvImJ_T0013051.1 MGP_129S1SvImJ_G0011140.1 mouse_genomes_project 14 94358255 94358753 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038879.1 MGP_129S1SvImJ_G0021144.1 mouse_genomes_project 14 25622831 25636168 - MGP_129S1SvImJ_P0038879 1700024G13Rik protein_coding protein_coding MGP_129S1SvImJ_T0002658.1 MGP_129S1SvImJ_G0002548.1 mouse_genomes_project 14 47190742 47191302 + MGP_129S1SvImJ_P0002658 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0098502.1 MGP_129S1SvImJ_G0036587.1 mouse_genomes_project 14 99269948 99269996 + Gm23764 rRNA rRNA MGP_129S1SvImJ_T0039719.1 MGP_129S1SvImJ_G0021414.1 mouse_genomes_project 14 52052106 52114942 - MGP_129S1SvImJ_P0039719 Zdhhc20 protein_coding protein_coding MGP_129S1SvImJ_T0039720.1 MGP_129S1SvImJ_G0021414.1 mouse_genomes_project 14 52056305 52114860 - MGP_129S1SvImJ_P0039720 Zdhhc20 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0009999.1 MGP_129S1SvImJ_G0008115.1 mouse_genomes_project 14 28259868 28259966 + Mir346 miRNA miRNA MGP_129S1SvImJ_T0017403.1 MGP_129S1SvImJ_G0015266.1 mouse_genomes_project 14 54438 86105 + Gm16741 processed_transcript processed_transcript MGP_129S1SvImJ_T0039732.1 MGP_129S1SvImJ_G0021419.1 mouse_genomes_project 14 53485084 53507099 + MGP_129S1SvImJ_P0039732 Rcbtb1 protein_coding protein_coding MGP_129S1SvImJ_T0039733.1 MGP_129S1SvImJ_G0021419.1 mouse_genomes_project 14 53485103 53521146 + MGP_129S1SvImJ_P0039733 Rcbtb1 protein_coding protein_coding MGP_129S1SvImJ_T0039734.1 MGP_129S1SvImJ_G0021419.1 mouse_genomes_project 14 53485109 53519406 + MGP_129S1SvImJ_P0039734 Rcbtb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039735.1 MGP_129S1SvImJ_G0021419.1 mouse_genomes_project 14 53485117 53521146 + MGP_129S1SvImJ_P0039735 Rcbtb1 protein_coding protein_coding MGP_129S1SvImJ_T0039736.1 MGP_129S1SvImJ_G0021419.1 mouse_genomes_project 14 53485351 53493847 + MGP_129S1SvImJ_P0039736 Rcbtb1 protein_coding protein_coding MGP_129S1SvImJ_T0039737.1 MGP_129S1SvImJ_G0021419.1 mouse_genomes_project 14 53485358 53506411 + Rcbtb1 protein_coding processed_transcript MGP_129S1SvImJ_T0039738.1 MGP_129S1SvImJ_G0021419.1 mouse_genomes_project 14 53485378 53493943 + MGP_129S1SvImJ_P0039738 Rcbtb1 protein_coding protein_coding MGP_129S1SvImJ_T0039739.1 MGP_129S1SvImJ_G0021419.1 mouse_genomes_project 14 53489488 53513842 + MGP_129S1SvImJ_P0039739 Rcbtb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039740.1 MGP_129S1SvImJ_G0021419.1 mouse_genomes_project 14 53500257 53508608 + Rcbtb1 protein_coding processed_transcript MGP_129S1SvImJ_T0039741.1 MGP_129S1SvImJ_G0021419.1 mouse_genomes_project 14 53501489 53521140 + MGP_129S1SvImJ_P0039741 Rcbtb1 protein_coding protein_coding MGP_129S1SvImJ_T0039742.1 MGP_129S1SvImJ_G0021419.1 mouse_genomes_project 14 53506472 53508569 + Rcbtb1 protein_coding retained_intron MGP_129S1SvImJ_T0040112.1 MGP_129S1SvImJ_G0021559.1 mouse_genomes_project 14 68277054 68315584 - MGP_129S1SvImJ_P0040112 protein_coding protein_coding MGP_129S1SvImJ_T0040394.1 MGP_129S1SvImJ_G0021666.1 mouse_genomes_project 14 119825893 119838758 - MGP_129S1SvImJ_P0040394 Gpr183 protein_coding protein_coding MGP_129S1SvImJ_T0039182.1 MGP_129S1SvImJ_G0021256.1 mouse_genomes_project 14 44709397 44730821 - MGP_129S1SvImJ_P0039182 Ttc5 protein_coding protein_coding MGP_129S1SvImJ_T0039855.1 MGP_129S1SvImJ_G0021470.1 mouse_genomes_project 14 58650838 58662183 + MGP_129S1SvImJ_P0039855 Prss51 protein_coding protein_coding MGP_129S1SvImJ_T0039856.1 MGP_129S1SvImJ_G0021470.1 mouse_genomes_project 14 58658210 58662179 + MGP_129S1SvImJ_P0039856 Prss51 protein_coding protein_coding MGP_129S1SvImJ_T0039857.1 MGP_129S1SvImJ_G0021470.1 mouse_genomes_project 14 58658240 58661621 + MGP_129S1SvImJ_P0039857 Prss51 protein_coding protein_coding MGP_129S1SvImJ_T0040352.1 MGP_129S1SvImJ_G0021650.1 mouse_genomes_project 14 116085672 116316023 - MGP_129S1SvImJ_P0040352 Abcc4 protein_coding protein_coding MGP_129S1SvImJ_T0040353.1 MGP_129S1SvImJ_G0021650.1 mouse_genomes_project 14 116085672 116316023 - MGP_129S1SvImJ_P0040353 Abcc4 protein_coding protein_coding MGP_129S1SvImJ_T0102245.1 MGP_129S1SvImJ_G0040079.1 mouse_genomes_project 14 45789310 45789760 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0011395.1 MGP_129S1SvImJ_G0009511.1 mouse_genomes_project 14 56020249 56020363 + Gm27845 misc_RNA misc_RNA MGP_129S1SvImJ_T0040153.1 MGP_129S1SvImJ_G0021573.1 mouse_genomes_project 14 70558725 70610833 - MGP_129S1SvImJ_P0040153 Cog3 protein_coding protein_coding MGP_129S1SvImJ_T0038957.1 MGP_129S1SvImJ_G0021179.1 mouse_genomes_project 14 28039730 28111318 + MGP_129S1SvImJ_P0038957 Wapl protein_coding protein_coding MGP_129S1SvImJ_T0038958.1 MGP_129S1SvImJ_G0021179.1 mouse_genomes_project 14 28039766 28109182 + MGP_129S1SvImJ_P0038958 Wapl protein_coding protein_coding MGP_129S1SvImJ_T0038959.1 MGP_129S1SvImJ_G0021179.1 mouse_genomes_project 14 28039924 28109277 + MGP_129S1SvImJ_P0038959 Wapl protein_coding protein_coding MGP_129S1SvImJ_T0038960.1 MGP_129S1SvImJ_G0021179.1 mouse_genomes_project 14 28060870 28109542 + Wapl protein_coding processed_transcript MGP_129S1SvImJ_T0038961.1 MGP_129S1SvImJ_G0021179.1 mouse_genomes_project 14 28089550 28109544 + MGP_129S1SvImJ_P0038961 Wapl protein_coding protein_coding MGP_129S1SvImJ_T0038962.1 MGP_129S1SvImJ_G0021179.1 mouse_genomes_project 14 28100253 28104530 + MGP_129S1SvImJ_P0038962 Wapl protein_coding protein_coding MGP_129S1SvImJ_T0039676.1 MGP_129S1SvImJ_G0021398.1 mouse_genomes_project 14 50893977 50917403 - MGP_129S1SvImJ_P0039676 Zmym5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0013003.1 MGP_129S1SvImJ_G0011092.1 mouse_genomes_project 14 23940757 23941539 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039874.1 MGP_129S1SvImJ_G0021477.1 mouse_genomes_project 14 59798227 59861834 - MGP_129S1SvImJ_P0039874 Fzd3 protein_coding protein_coding MGP_129S1SvImJ_T0039875.1 MGP_129S1SvImJ_G0021477.1 mouse_genomes_project 14 59806920 59825974 - Fzd3 protein_coding processed_transcript MGP_129S1SvImJ_T0002664.1 MGP_129S1SvImJ_G0002553.1 mouse_genomes_project 14 47371375 47371864 + MGP_129S1SvImJ_P0002664 Trav6-4 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002665.1 MGP_129S1SvImJ_G0002553.1 mouse_genomes_project 14 47371406 47371864 + MGP_129S1SvImJ_P0002665 Trav6-4 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0100686.1 MGP_129S1SvImJ_G0038753.1 mouse_genomes_project 14 57126498 57126657 + Gm25162 snoRNA snoRNA MGP_129S1SvImJ_T0002548.1 MGP_129S1SvImJ_G0002451.1 mouse_genomes_project 14 48106324 48106385 + MGP_129S1SvImJ_P0002548 Traj40 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0039685.1 MGP_129S1SvImJ_G0021405.1 mouse_genomes_project 14 51442797 51576249 - MGP_129S1SvImJ_P0039685 Cryl1 protein_coding protein_coding MGP_129S1SvImJ_T0000944.1 MGP_129S1SvImJ_G0000876.1 mouse_genomes_project 14 63978512 63982088 - TEC TEC MGP_129S1SvImJ_T0003596.1 MGP_129S1SvImJ_G0003265.1 mouse_genomes_project 14 64123573 64127121 - Gm27221 antisense antisense MGP_129S1SvImJ_T0038978.1 MGP_129S1SvImJ_G0021184.1 mouse_genomes_project 14 30537097 30549197 - MGP_129S1SvImJ_P0038978 Rgr protein_coding protein_coding MGP_129S1SvImJ_T0003595.1 MGP_129S1SvImJ_G0003264.1 mouse_genomes_project 14 64058362 64080097 + Gm27175 antisense antisense MGP_129S1SvImJ_T0099432.1 MGP_129S1SvImJ_G0037499.1 mouse_genomes_project 14 118531167 118531251 + Gm25781 snRNA snRNA MGP_129S1SvImJ_T0040386.1 MGP_129S1SvImJ_G0021661.1 mouse_genomes_project 14 119070215 119170339 - MGP_129S1SvImJ_P0040386 Stk24 protein_coding protein_coding MGP_129S1SvImJ_T0038395.1 MGP_129S1SvImJ_G0021025.1 mouse_genomes_project 14 12520683 12533896 - MGP_129S1SvImJ_P0038395 2700060E02Rik protein_coding protein_coding MGP_129S1SvImJ_T0039968.1 MGP_129S1SvImJ_G0021509.1 mouse_genomes_project 14 62834760 62840022 + MGP_129S1SvImJ_P0039968 Nefl protein_coding protein_coding MGP_129S1SvImJ_T0003563.1 MGP_129S1SvImJ_G0003238.1 mouse_genomes_project 14 32803720 32837502 + Gm20642 antisense antisense MGP_129S1SvImJ_T0039682.1 MGP_129S1SvImJ_G0021404.1 mouse_genomes_project 14 51283413 51295468 - MGP_129S1SvImJ_P0039682 Gjb6 protein_coding protein_coding MGP_129S1SvImJ_T0039683.1 MGP_129S1SvImJ_G0021404.1 mouse_genomes_project 14 51284392 51295138 - MGP_129S1SvImJ_P0039683 Gjb6 protein_coding protein_coding MGP_129S1SvImJ_T0039684.1 MGP_129S1SvImJ_G0021404.1 mouse_genomes_project 14 51290947 51292169 - Gjb6 protein_coding processed_transcript MGP_129S1SvImJ_T0039805.1 MGP_129S1SvImJ_G0021447.1 mouse_genomes_project 14 57011329 57049622 + Fam124a protein_coding processed_transcript MGP_129S1SvImJ_T0039806.1 MGP_129S1SvImJ_G0021447.1 mouse_genomes_project 14 57011329 57067061 + Fam124a protein_coding processed_transcript MGP_129S1SvImJ_T0039807.1 MGP_129S1SvImJ_G0021447.1 mouse_genomes_project 14 57011329 57069517 + MGP_129S1SvImJ_P0039807 Fam124a protein_coding protein_coding MGP_129S1SvImJ_T0039808.1 MGP_129S1SvImJ_G0021447.1 mouse_genomes_project 14 57011367 57025053 + Fam124a protein_coding processed_transcript MGP_129S1SvImJ_T0040059.1 MGP_129S1SvImJ_G0021547.1 mouse_genomes_project 14 65298101 65304158 - MGP_129S1SvImJ_P0040059 Fgf17 protein_coding protein_coding MGP_129S1SvImJ_T0039412.1 MGP_129S1SvImJ_G0021316.1 mouse_genomes_project 14 48576859 48580789 - MGP_129S1SvImJ_P0039412 Psmb5 protein_coding protein_coding MGP_129S1SvImJ_T0002600.1 MGP_129S1SvImJ_G0002501.1 mouse_genomes_project 14 48089479 48089542 + TR_J_pseudogene TR_J_pseudogene MGP_129S1SvImJ_T0002675.1 MGP_129S1SvImJ_G0002561.1 mouse_genomes_project 14 47483820 47484322 + MGP_129S1SvImJ_P0002675 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0013026.1 MGP_129S1SvImJ_G0011115.1 mouse_genomes_project 14 50321433 50322442 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0040060.1 MGP_129S1SvImJ_G0021548.1 mouse_genomes_project 14 65309193 65318764 - MGP_129S1SvImJ_P0040060 Npm2 protein_coding protein_coding MGP_129S1SvImJ_T0006747.1 MGP_129S1SvImJ_G0005577.1 mouse_genomes_project 14 116339338 116349354 - Gm27198 lincRNA lincRNA MGP_129S1SvImJ_T0038965.1 MGP_129S1SvImJ_G0021181.1 mouse_genomes_project 14 29194255 29200449 - MGP_129S1SvImJ_P0038965 4930596D02Rik protein_coding protein_coding MGP_129S1SvImJ_T0039058.1 MGP_129S1SvImJ_G0021216.1 mouse_genomes_project 14 40523883 40545871 + MGP_129S1SvImJ_P0039058 Cgrrf1 protein_coding protein_coding MGP_129S1SvImJ_T0039059.1 MGP_129S1SvImJ_G0021216.1 mouse_genomes_project 14 40523968 40532210 + Cgrrf1 protein_coding retained_intron MGP_129S1SvImJ_T0039060.1 MGP_129S1SvImJ_G0021216.1 mouse_genomes_project 14 40523978 40538404 + Cgrrf1 protein_coding retained_intron MGP_129S1SvImJ_T0039061.1 MGP_129S1SvImJ_G0021216.1 mouse_genomes_project 14 40523993 40539865 + Cgrrf1 protein_coding retained_intron MGP_129S1SvImJ_T0006687.1 MGP_129S1SvImJ_G0005532.1 mouse_genomes_project 14 25714897 25733388 + Gm2990 lincRNA lincRNA MGP_129S1SvImJ_T0098501.1 MGP_129S1SvImJ_G0036586.1 mouse_genomes_project 14 83637759 83637859 + Gm26405 rRNA rRNA MGP_129S1SvImJ_T0039378.1 MGP_129S1SvImJ_G0021307.1 mouse_genomes_project 14 48309933 48351427 - MGP_129S1SvImJ_P0039378 Slc7a7 protein_coding protein_coding MGP_129S1SvImJ_T0039379.1 MGP_129S1SvImJ_G0021307.1 mouse_genomes_project 14 48309935 48360849 - MGP_129S1SvImJ_P0039379 Slc7a7 protein_coding protein_coding MGP_129S1SvImJ_T0039380.1 MGP_129S1SvImJ_G0021307.1 mouse_genomes_project 14 48309936 48353634 - MGP_129S1SvImJ_P0039380 Slc7a7 protein_coding protein_coding MGP_129S1SvImJ_T0039381.1 MGP_129S1SvImJ_G0021307.1 mouse_genomes_project 14 48313839 48324246 - Slc7a7 protein_coding processed_transcript MGP_129S1SvImJ_T0039382.1 MGP_129S1SvImJ_G0021307.1 mouse_genomes_project 14 48314288 48340095 - Slc7a7 protein_coding processed_transcript MGP_129S1SvImJ_T0039383.1 MGP_129S1SvImJ_G0021307.1 mouse_genomes_project 14 48319076 48354018 - MGP_129S1SvImJ_P0039383 Slc7a7 protein_coding protein_coding MGP_129S1SvImJ_T0039384.1 MGP_129S1SvImJ_G0021307.1 mouse_genomes_project 14 48350785 48355584 - MGP_129S1SvImJ_P0039384 Slc7a7 protein_coding protein_coding MGP_129S1SvImJ_T0039385.1 MGP_129S1SvImJ_G0021307.1 mouse_genomes_project 14 48350922 48360930 - MGP_129S1SvImJ_P0039385 Slc7a7 protein_coding protein_coding MGP_129S1SvImJ_T0039417.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48608257 48619696 - MGP_129S1SvImJ_P0039417 Acin1 protein_coding protein_coding MGP_129S1SvImJ_T0039418.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48608257 48656482 - MGP_129S1SvImJ_P0039418 Acin1 protein_coding protein_coding MGP_129S1SvImJ_T0039419.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48608257 48619775 - MGP_129S1SvImJ_P0039419 Acin1 protein_coding protein_coding MGP_129S1SvImJ_T0039420.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48608257 48619747 - MGP_129S1SvImJ_P0039420 Acin1 protein_coding protein_coding MGP_129S1SvImJ_T0039421.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48608258 48656167 - MGP_129S1SvImJ_P0039421 Acin1 protein_coding protein_coding MGP_129S1SvImJ_T0039422.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48608258 48619781 - MGP_129S1SvImJ_P0039422 Acin1 protein_coding protein_coding MGP_129S1SvImJ_T0039423.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48608263 48619762 - MGP_129S1SvImJ_P0039423 Acin1 protein_coding protein_coding MGP_129S1SvImJ_T0039424.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48608825 48656482 - MGP_129S1SvImJ_P0039424 Acin1 protein_coding protein_coding MGP_129S1SvImJ_T0039425.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48608825 48619318 - MGP_129S1SvImJ_P0039425 Acin1 protein_coding protein_coding MGP_129S1SvImJ_T0039426.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48608999 48610635 - Acin1 protein_coding retained_intron MGP_129S1SvImJ_T0039427.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48609385 48610309 - MGP_129S1SvImJ_P0039427 Acin1 protein_coding protein_coding MGP_129S1SvImJ_T0039428.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48610353 48611952 - Acin1 protein_coding retained_intron MGP_129S1SvImJ_T0039429.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48610825 48614637 - Acin1 protein_coding retained_intron MGP_129S1SvImJ_T0039430.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48611085 48612133 - Acin1 protein_coding retained_intron MGP_129S1SvImJ_T0039431.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48611299 48616325 - Acin1 protein_coding processed_transcript MGP_129S1SvImJ_T0039432.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48611391 48614401 - Acin1 protein_coding retained_intron MGP_129S1SvImJ_T0039433.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48611827 48619765 - MGP_129S1SvImJ_P0039433 Acin1 protein_coding protein_coding MGP_129S1SvImJ_T0039434.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48612641 48615959 - Acin1 protein_coding processed_transcript MGP_129S1SvImJ_T0039435.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48616851 48619761 - Acin1 protein_coding processed_transcript MGP_129S1SvImJ_T0039436.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48616904 48619761 - Acin1 protein_coding processed_transcript MGP_129S1SvImJ_T0039437.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48617466 48631442 - Acin1 protein_coding retained_intron MGP_129S1SvImJ_T0039438.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48617580 48619771 - Acin1 protein_coding retained_intron MGP_129S1SvImJ_T0039439.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48629530 48632409 - Acin1 protein_coding retained_intron MGP_129S1SvImJ_T0039440.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48632857 48655611 - MGP_129S1SvImJ_P0039440 Acin1 protein_coding protein_coding MGP_129S1SvImJ_T0039441.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48643631 48656184 - Acin1 protein_coding processed_transcript MGP_129S1SvImJ_T0039442.1 MGP_129S1SvImJ_G0021321.1 mouse_genomes_project 14 48647156 48656166 - Acin1 protein_coding retained_intron MGP_129S1SvImJ_T0003546.1 MGP_129S1SvImJ_G0003224.1 mouse_genomes_project 14 13406654 13409697 + 2810402E24Rik antisense antisense MGP_129S1SvImJ_T0100703.1 MGP_129S1SvImJ_G0038770.1 mouse_genomes_project 14 92743092 92743222 + Gm25133 snoRNA snoRNA MGP_129S1SvImJ_T0039402.1 MGP_129S1SvImJ_G0021312.1 mouse_genomes_project 14 48462095 48472989 - MGP_129S1SvImJ_P0039402 Prmt5 protein_coding protein_coding MGP_129S1SvImJ_T0039403.1 MGP_129S1SvImJ_G0021312.1 mouse_genomes_project 14 48465910 48468366 - MGP_129S1SvImJ_P0039403 Prmt5 protein_coding protein_coding MGP_129S1SvImJ_T0039404.1 MGP_129S1SvImJ_G0021312.1 mouse_genomes_project 14 48466115 48472899 - MGP_129S1SvImJ_P0039404 Prmt5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039405.1 MGP_129S1SvImJ_G0021312.1 mouse_genomes_project 14 48468282 48472857 - Prmt5 protein_coding retained_intron MGP_129S1SvImJ_T0039406.1 MGP_129S1SvImJ_G0021312.1 mouse_genomes_project 14 48468847 48472934 - Prmt5 protein_coding retained_intron MGP_129S1SvImJ_T0039407.1 MGP_129S1SvImJ_G0021312.1 mouse_genomes_project 14 48469500 48471122 - Prmt5 protein_coding processed_transcript MGP_129S1SvImJ_T0039408.1 MGP_129S1SvImJ_G0021312.1 mouse_genomes_project 14 48471614 48472825 - Prmt5 protein_coding processed_transcript MGP_129S1SvImJ_T0010040.1 MGP_129S1SvImJ_G0008156.1 mouse_genomes_project 14 112498733 112498813 + Mir92-1 miRNA miRNA MGP_129S1SvImJ_T0039076.1 MGP_129S1SvImJ_G0021220.1 mouse_genomes_project 14 41011978 41033082 + MGP_129S1SvImJ_P0039076 Socs4 protein_coding protein_coding MGP_129S1SvImJ_T0040360.1 MGP_129S1SvImJ_G0021654.1 mouse_genomes_project 14 116609711 116637126 - Uggt2 protein_coding retained_intron MGP_129S1SvImJ_T0040361.1 MGP_129S1SvImJ_G0021654.1 mouse_genomes_project 14 116609711 116737125 - MGP_129S1SvImJ_P0040361 Uggt2 protein_coding protein_coding MGP_129S1SvImJ_T0040362.1 MGP_129S1SvImJ_G0021654.1 mouse_genomes_project 14 116610867 116636886 - Uggt2 protein_coding retained_intron MGP_129S1SvImJ_T0040363.1 MGP_129S1SvImJ_G0021654.1 mouse_genomes_project 14 116611092 116636407 - Uggt2 protein_coding processed_transcript MGP_129S1SvImJ_T0040364.1 MGP_129S1SvImJ_G0021654.1 mouse_genomes_project 14 116611495 116637060 - Uggt2 protein_coding retained_intron MGP_129S1SvImJ_T0040365.1 MGP_129S1SvImJ_G0021654.1 mouse_genomes_project 14 116623948 116638725 - Uggt2 protein_coding processed_transcript MGP_129S1SvImJ_T0040366.1 MGP_129S1SvImJ_G0021654.1 mouse_genomes_project 14 116627672 116637833 - Uggt2 protein_coding retained_intron MGP_129S1SvImJ_T0040367.1 MGP_129S1SvImJ_G0021654.1 mouse_genomes_project 14 116627838 116637219 - Uggt2 protein_coding processed_transcript MGP_129S1SvImJ_T0040368.1 MGP_129S1SvImJ_G0021654.1 mouse_genomes_project 14 116628787 116648071 - MGP_129S1SvImJ_P0040368 Uggt2 protein_coding protein_coding MGP_129S1SvImJ_T0040369.1 MGP_129S1SvImJ_G0021654.1 mouse_genomes_project 14 116644072 116689708 - MGP_129S1SvImJ_P0040369 Uggt2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040370.1 MGP_129S1SvImJ_G0021654.1 mouse_genomes_project 14 116644072 116662380 - MGP_129S1SvImJ_P0040370 Uggt2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040371.1 MGP_129S1SvImJ_G0021654.1 mouse_genomes_project 14 116662507 116665760 - Uggt2 protein_coding retained_intron MGP_129S1SvImJ_T0040372.1 MGP_129S1SvImJ_G0021654.1 mouse_genomes_project 14 116674084 116681155 - Uggt2 protein_coding retained_intron MGP_129S1SvImJ_T0040373.1 MGP_129S1SvImJ_G0021654.1 mouse_genomes_project 14 116691799 116737125 - Uggt2 protein_coding retained_intron MGP_129S1SvImJ_T0039029.1 MGP_129S1SvImJ_G0021209.1 mouse_genomes_project 14 39087550 39162769 - MGP_129S1SvImJ_P0039029 Fermt2 protein_coding protein_coding MGP_129S1SvImJ_T0039030.1 MGP_129S1SvImJ_G0021209.1 mouse_genomes_project 14 39098735 39108681 - MGP_129S1SvImJ_P0039030 Fermt2 protein_coding protein_coding MGP_129S1SvImJ_T0039031.1 MGP_129S1SvImJ_G0021209.1 mouse_genomes_project 14 39106721 39162615 - MGP_129S1SvImJ_P0039031 Fermt2 protein_coding protein_coding MGP_129S1SvImJ_T0039032.1 MGP_129S1SvImJ_G0021209.1 mouse_genomes_project 14 39137138 39162437 - Fermt2 protein_coding processed_transcript MGP_129S1SvImJ_T0038923.1 MGP_129S1SvImJ_G0021161.1 mouse_genomes_project 14 27286445 27296509 + MGP_129S1SvImJ_P0038923 Rbp3 protein_coding protein_coding MGP_129S1SvImJ_T0006689.1 MGP_129S1SvImJ_G0005534.1 mouse_genomes_project 14 28122303 28130221 + A930038B10Rik lincRNA lincRNA MGP_129S1SvImJ_T0006690.1 MGP_129S1SvImJ_G0005534.1 mouse_genomes_project 14 28123128 28135590 + A930038B10Rik lincRNA lincRNA MGP_129S1SvImJ_T0039752.1 MGP_129S1SvImJ_G0021425.1 mouse_genomes_project 14 53742056 53864503 + MGP_129S1SvImJ_P0039752 Cab39l protein_coding protein_coding MGP_129S1SvImJ_T0000930.1 MGP_129S1SvImJ_G0000862.1 mouse_genomes_project 14 14842181 14845850 + TEC TEC MGP_129S1SvImJ_T0002513.1 MGP_129S1SvImJ_G0002422.1 mouse_genomes_project 14 48148843 48151435 + MGP_129S1SvImJ_P0002513 Trac TR_C_gene TR_C_gene MGP_129S1SvImJ_T0002514.1 MGP_129S1SvImJ_G0002422.1 mouse_genomes_project 14 48148843 48152520 + MGP_129S1SvImJ_P0002514 Trac TR_C_gene TR_C_gene MGP_129S1SvImJ_T0002577.1 MGP_129S1SvImJ_G0002480.1 mouse_genomes_project 14 48139773 48139832 + MGP_129S1SvImJ_P0002577 Traj7 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0039416.1 MGP_129S1SvImJ_G0021320.1 mouse_genomes_project 14 48607048 48614352 + MGP_129S1SvImJ_P0039416 Gm17606 protein_coding protein_coding MGP_129S1SvImJ_T0040155.1 MGP_129S1SvImJ_G0021575.1 mouse_genomes_project 14 70710075 70713247 + MGP_129S1SvImJ_P0040155 Tpt1 protein_coding protein_coding MGP_129S1SvImJ_T0040156.1 MGP_129S1SvImJ_G0021575.1 mouse_genomes_project 14 70710284 70713357 + MGP_129S1SvImJ_P0040156 Tpt1 protein_coding protein_coding MGP_129S1SvImJ_T0040157.1 MGP_129S1SvImJ_G0021575.1 mouse_genomes_project 14 70710313 70711724 + Tpt1 protein_coding retained_intron MGP_129S1SvImJ_T0040158.1 MGP_129S1SvImJ_G0021575.1 mouse_genomes_project 14 70710314 70710952 + Tpt1 protein_coding retained_intron MGP_129S1SvImJ_T0040159.1 MGP_129S1SvImJ_G0021575.1 mouse_genomes_project 14 70710337 70711920 + Tpt1 protein_coding retained_intron MGP_129S1SvImJ_T0040160.1 MGP_129S1SvImJ_G0021575.1 mouse_genomes_project 14 70710882 70713129 + Tpt1 protein_coding processed_transcript MGP_129S1SvImJ_T0040004.1 MGP_129S1SvImJ_G0021527.1 mouse_genomes_project 14 64439910 64678928 + MGP_129S1SvImJ_P0040004 Pebp4 protein_coding protein_coding MGP_129S1SvImJ_T0006703.1 MGP_129S1SvImJ_G0005544.1 mouse_genomes_project 14 44758343 44758581 - Rprl1 lincRNA lincRNA MGP_129S1SvImJ_T0002656.1 MGP_129S1SvImJ_G0002546.1 mouse_genomes_project 14 47110934 47111462 + MGP_129S1SvImJ_P0002656 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0100689.1 MGP_129S1SvImJ_G0038756.1 mouse_genomes_project 14 62304806 62304938 + Gm24981 snoRNA snoRNA MGP_129S1SvImJ_T0038558.1 MGP_129S1SvImJ_G0021068.1 mouse_genomes_project 14 18783511 18830076 + MGP_129S1SvImJ_P0038558 Anxa11 protein_coding protein_coding MGP_129S1SvImJ_T0038559.1 MGP_129S1SvImJ_G0021068.1 mouse_genomes_project 14 18783538 18822507 + Anxa11 protein_coding retained_intron MGP_129S1SvImJ_T0038560.1 MGP_129S1SvImJ_G0021068.1 mouse_genomes_project 14 18783538 18830076 + Anxa11 protein_coding retained_intron MGP_129S1SvImJ_T0038561.1 MGP_129S1SvImJ_G0021068.1 mouse_genomes_project 14 18783538 18822900 + MGP_129S1SvImJ_P0038561 Anxa11 protein_coding protein_coding MGP_129S1SvImJ_T0040354.1 MGP_129S1SvImJ_G0021651.1 mouse_genomes_project 14 116400898 116491229 + MGP_129S1SvImJ_P0040354 Cldn10 protein_coding protein_coding MGP_129S1SvImJ_T0040355.1 MGP_129S1SvImJ_G0021651.1 mouse_genomes_project 14 116400908 116491230 + MGP_129S1SvImJ_P0040355 Cldn10 protein_coding protein_coding MGP_129S1SvImJ_T0040356.1 MGP_129S1SvImJ_G0021651.1 mouse_genomes_project 14 116471630 116492190 + MGP_129S1SvImJ_P0040356 Cldn10 protein_coding protein_coding MGP_129S1SvImJ_T0040375.1 MGP_129S1SvImJ_G0021656.1 mouse_genomes_project 14 117711583 117736417 - MGP_129S1SvImJ_P0040375 Oxgr1 protein_coding protein_coding MGP_129S1SvImJ_T0040258.1 MGP_129S1SvImJ_G0021618.1 mouse_genomes_project 14 95584873 95599588 + MGP_129S1SvImJ_P0040258 Klf5 protein_coding protein_coding MGP_129S1SvImJ_T0039185.1 MGP_129S1SvImJ_G0021259.1 mouse_genomes_project 14 44774416 44824801 - MGP_129S1SvImJ_P0039185 Tep1 protein_coding protein_coding MGP_129S1SvImJ_T0009988.1 MGP_129S1SvImJ_G0008104.1 mouse_genomes_project 14 6289571 6289651 - Gm27907 miRNA miRNA MGP_129S1SvImJ_T0038919.1 MGP_129S1SvImJ_G0021157.1 mouse_genomes_project 14 26807497 26887312 + MGP_129S1SvImJ_P0038919 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0039727.1 MGP_129S1SvImJ_G0021417.1 mouse_genomes_project 14 53420003 53431001 - MGP_129S1SvImJ_P0039727 1700129C05Rik protein_coding protein_coding MGP_129S1SvImJ_T0039728.1 MGP_129S1SvImJ_G0021417.1 mouse_genomes_project 14 53420202 53431001 - MGP_129S1SvImJ_P0039728 1700129C05Rik protein_coding protein_coding MGP_129S1SvImJ_T0039729.1 MGP_129S1SvImJ_G0021417.1 mouse_genomes_project 14 53420205 53431001 - MGP_129S1SvImJ_P0039729 1700129C05Rik protein_coding protein_coding MGP_129S1SvImJ_T0039730.1 MGP_129S1SvImJ_G0021417.1 mouse_genomes_project 14 53429433 53431001 - MGP_129S1SvImJ_P0039730 1700129C05Rik protein_coding protein_coding MGP_129S1SvImJ_T0038320.1 MGP_129S1SvImJ_G0021000.1 mouse_genomes_project 14 4785493 5281063 - MGP_129S1SvImJ_P0038320 Cadps protein_coding protein_coding MGP_129S1SvImJ_T0038321.1 MGP_129S1SvImJ_G0021000.1 mouse_genomes_project 14 4785495 5281063 - MGP_129S1SvImJ_P0038321 Cadps protein_coding protein_coding MGP_129S1SvImJ_T0038322.1 MGP_129S1SvImJ_G0021000.1 mouse_genomes_project 14 4785495 5281063 - MGP_129S1SvImJ_P0038322 Cadps protein_coding protein_coding MGP_129S1SvImJ_T0038323.1 MGP_129S1SvImJ_G0021000.1 mouse_genomes_project 14 4785495 5281063 - MGP_129S1SvImJ_P0038323 Cadps protein_coding protein_coding MGP_129S1SvImJ_T0002544.1 MGP_129S1SvImJ_G0002447.1 mouse_genomes_project 14 48102092 48102153 + MGP_129S1SvImJ_P0002544 Traj44 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0003560.1 MGP_129S1SvImJ_G0003235.1 mouse_genomes_project 14 27859825 27860792 + Gm17110 antisense antisense MGP_129S1SvImJ_T0039140.1 MGP_129S1SvImJ_G0021230.1 mouse_genomes_project 14 43075941 43095614 + MGP_129S1SvImJ_P0039140 Naa30 protein_coding protein_coding MGP_129S1SvImJ_T0039141.1 MGP_129S1SvImJ_G0021230.1 mouse_genomes_project 14 43076237 43095771 + MGP_129S1SvImJ_P0039141 Naa30 protein_coding protein_coding MGP_129S1SvImJ_T0039142.1 MGP_129S1SvImJ_G0021230.1 mouse_genomes_project 14 43081533 43094113 + Naa30 protein_coding retained_intron MGP_129S1SvImJ_T0039143.1 MGP_129S1SvImJ_G0021230.1 mouse_genomes_project 14 43082154 43092995 + Naa30 protein_coding retained_intron MGP_129S1SvImJ_T0038742.1 MGP_129S1SvImJ_G0021118.1 mouse_genomes_project 14 24256032 24299461 - MGP_129S1SvImJ_P0038742 Smim4 protein_coding protein_coding MGP_129S1SvImJ_T0038743.1 MGP_129S1SvImJ_G0021118.1 mouse_genomes_project 14 24256559 24299481 - MGP_129S1SvImJ_P0038743 Smim4 protein_coding protein_coding MGP_129S1SvImJ_T0038744.1 MGP_129S1SvImJ_G0021118.1 mouse_genomes_project 14 24295226 24299406 - MGP_129S1SvImJ_P0038744 Smim4 protein_coding protein_coding MGP_129S1SvImJ_T0038745.1 MGP_129S1SvImJ_G0021118.1 mouse_genomes_project 14 24295523 24299498 - MGP_129S1SvImJ_P0038745 Smim4 protein_coding protein_coding MGP_129S1SvImJ_T0038634.1 MGP_129S1SvImJ_G0021089.1 mouse_genomes_project 14 20038333 20112146 + MGP_129S1SvImJ_P0038634 Il17rd protein_coding protein_coding MGP_129S1SvImJ_T0009990.1 MGP_129S1SvImJ_G0008106.1 mouse_genomes_project 14 13456827 13456896 + Mir6946 miRNA miRNA MGP_129S1SvImJ_T0039996.1 MGP_129S1SvImJ_G0021523.1 mouse_genomes_project 14 64268522 64283863 - MGP_129S1SvImJ_P0039996 R3hcc1 protein_coding protein_coding MGP_129S1SvImJ_T0039997.1 MGP_129S1SvImJ_G0021523.1 mouse_genomes_project 14 64268523 64283772 - MGP_129S1SvImJ_P0039997 R3hcc1 protein_coding protein_coding MGP_129S1SvImJ_T0039998.1 MGP_129S1SvImJ_G0021523.1 mouse_genomes_project 14 64269547 64271236 - R3hcc1 protein_coding retained_intron MGP_129S1SvImJ_T0039999.1 MGP_129S1SvImJ_G0021523.1 mouse_genomes_project 14 64274713 64281577 - R3hcc1 protein_coding retained_intron MGP_129S1SvImJ_T0040000.1 MGP_129S1SvImJ_G0021523.1 mouse_genomes_project 14 64281888 64283832 - R3hcc1 protein_coding processed_transcript MGP_129S1SvImJ_T0038613.1 MGP_129S1SvImJ_G0021083.1 mouse_genomes_project 14 19620340 19639340 + MGP_129S1SvImJ_P0038613 Arf4 protein_coding protein_coding MGP_129S1SvImJ_T0038614.1 MGP_129S1SvImJ_G0021083.1 mouse_genomes_project 14 19620428 19638896 + MGP_129S1SvImJ_P0038614 Arf4 protein_coding protein_coding MGP_129S1SvImJ_T0038615.1 MGP_129S1SvImJ_G0021083.1 mouse_genomes_project 14 19620492 19638883 + MGP_129S1SvImJ_P0038615 Arf4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038616.1 MGP_129S1SvImJ_G0021083.1 mouse_genomes_project 14 19620519 19638890 + Arf4 protein_coding processed_transcript MGP_129S1SvImJ_T0038617.1 MGP_129S1SvImJ_G0021083.1 mouse_genomes_project 14 19635092 19635939 + Arf4 protein_coding retained_intron MGP_129S1SvImJ_T0038618.1 MGP_129S1SvImJ_G0021083.1 mouse_genomes_project 14 19635212 19647196 + MGP_129S1SvImJ_P0038618 Arf4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0003538.1 MGP_129S1SvImJ_G0003221.1 mouse_genomes_project 14 6434035 6472102 + Gm11100 antisense antisense MGP_129S1SvImJ_T0003539.1 MGP_129S1SvImJ_G0003221.1 mouse_genomes_project 14 6453671 6472102 + Gm11100 antisense antisense MGP_129S1SvImJ_T0010030.1 MGP_129S1SvImJ_G0008146.1 mouse_genomes_project 14 99467754 99467838 - Mir5130 miRNA miRNA MGP_129S1SvImJ_T0002744.1 MGP_129S1SvImJ_G0002619.1 mouse_genomes_project 14 47677217 47677479 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0038394.1 MGP_129S1SvImJ_G0021024.1 mouse_genomes_project 14 12461302 12521069 + MGP_129S1SvImJ_P0038394 Nid2 protein_coding protein_coding MGP_129S1SvImJ_T0003579.1 MGP_129S1SvImJ_G0003252.1 mouse_genomes_project 14 50699642 50713304 - Gm16573 antisense antisense MGP_129S1SvImJ_T0003580.1 MGP_129S1SvImJ_G0003252.1 mouse_genomes_project 14 50703098 50713320 - Gm16573 antisense antisense MGP_129S1SvImJ_T0003581.1 MGP_129S1SvImJ_G0003252.1 mouse_genomes_project 14 50709824 50713320 - Gm16573 antisense antisense MGP_129S1SvImJ_T0017437.1 MGP_129S1SvImJ_G0015277.1 mouse_genomes_project 14 71629133 71644064 + 1700108F19Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017438.1 MGP_129S1SvImJ_G0015277.1 mouse_genomes_project 14 71633816 71643987 + 1700108F19Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017439.1 MGP_129S1SvImJ_G0015277.1 mouse_genomes_project 14 71633829 71644003 + 1700108F19Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017440.1 MGP_129S1SvImJ_G0015277.1 mouse_genomes_project 14 71633829 71636115 + 1700108F19Rik processed_transcript retained_intron MGP_129S1SvImJ_T0017441.1 MGP_129S1SvImJ_G0015277.1 mouse_genomes_project 14 71633857 71643990 + 1700108F19Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017442.1 MGP_129S1SvImJ_G0015277.1 mouse_genomes_project 14 71633860 71636677 + 1700108F19Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017443.1 MGP_129S1SvImJ_G0015277.1 mouse_genomes_project 14 71633904 71636677 + 1700108F19Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017444.1 MGP_129S1SvImJ_G0015277.1 mouse_genomes_project 14 71638574 71643782 + 1700108F19Rik processed_transcript lincRNA MGP_129S1SvImJ_T0039769.1 MGP_129S1SvImJ_G0021433.1 mouse_genomes_project 14 54963958 55031528 + MGP_129S1SvImJ_P0039769 Spata13 protein_coding protein_coding MGP_129S1SvImJ_T0039770.1 MGP_129S1SvImJ_G0021433.1 mouse_genomes_project 14 54964691 55031569 + MGP_129S1SvImJ_P0039770 Spata13 protein_coding protein_coding MGP_129S1SvImJ_T0039771.1 MGP_129S1SvImJ_G0021433.1 mouse_genomes_project 14 54964712 55031054 + Spata13 protein_coding processed_transcript MGP_129S1SvImJ_T0039772.1 MGP_129S1SvImJ_G0021433.1 mouse_genomes_project 14 55030981 55110571 + MGP_129S1SvImJ_P0039772 Spata13 protein_coding protein_coding MGP_129S1SvImJ_T0039773.1 MGP_129S1SvImJ_G0021433.1 mouse_genomes_project 14 55032135 55051064 + MGP_129S1SvImJ_P0039773 Spata13 protein_coding protein_coding MGP_129S1SvImJ_T0039774.1 MGP_129S1SvImJ_G0021433.1 mouse_genomes_project 14 55044447 55048369 + Spata13 protein_coding processed_transcript MGP_129S1SvImJ_T0039775.1 MGP_129S1SvImJ_G0021433.1 mouse_genomes_project 14 55048227 55096028 + MGP_129S1SvImJ_P0039775 Spata13 protein_coding protein_coding MGP_129S1SvImJ_T0039776.1 MGP_129S1SvImJ_G0021433.1 mouse_genomes_project 14 55076592 55110560 + MGP_129S1SvImJ_P0039776 Spata13 protein_coding protein_coding MGP_129S1SvImJ_T0039777.1 MGP_129S1SvImJ_G0021433.1 mouse_genomes_project 14 55097088 55108678 + Spata13 protein_coding retained_intron MGP_129S1SvImJ_T0040024.1 MGP_129S1SvImJ_G0021533.1 mouse_genomes_project 14 64806497 64834575 - MGP_129S1SvImJ_P0040024 Sorbs3 protein_coding protein_coding MGP_129S1SvImJ_T0040025.1 MGP_129S1SvImJ_G0021533.1 mouse_genomes_project 14 64807199 64833036 - MGP_129S1SvImJ_P0040025 Sorbs3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0038652.1 MGP_129S1SvImJ_G0021099.1 mouse_genomes_project 14 23083000 23097885 + MGP_129S1SvImJ_P0038652 Actr8 protein_coding protein_coding MGP_129S1SvImJ_T0006694.1 MGP_129S1SvImJ_G0005538.1 mouse_genomes_project 14 40105441 40124615 + Gm15221 lincRNA lincRNA MGP_129S1SvImJ_T0039609.1 MGP_129S1SvImJ_G0021359.1 mouse_genomes_project 14 49691960 49694318 + MGP_129S1SvImJ_P0039609 Tssk4 protein_coding protein_coding MGP_129S1SvImJ_T0039610.1 MGP_129S1SvImJ_G0021359.1 mouse_genomes_project 14 49691962 49694318 + MGP_129S1SvImJ_P0039610 Tssk4 protein_coding protein_coding MGP_129S1SvImJ_T0039611.1 MGP_129S1SvImJ_G0021359.1 mouse_genomes_project 14 49692127 49694227 + MGP_129S1SvImJ_P0039611 Tssk4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0010001.1 MGP_129S1SvImJ_G0008117.1 mouse_genomes_project 14 39299220 39299313 - Mir5131 miRNA miRNA MGP_129S1SvImJ_T0006712.1 MGP_129S1SvImJ_G0005550.1 mouse_genomes_project 14 48288601 48292006 - 5330426L24Rik lincRNA lincRNA MGP_129S1SvImJ_T0038403.1 MGP_129S1SvImJ_G0021028.1 mouse_genomes_project 14 12883854 12925603 - MGP_129S1SvImJ_P0038403 Kcnk5 protein_coding protein_coding MGP_129S1SvImJ_T0038330.1 MGP_129S1SvImJ_G0021003.1 mouse_genomes_project 14 6324656 6430072 - MGP_129S1SvImJ_P0038330 Gm281 protein_coding protein_coding MGP_129S1SvImJ_T0038788.1 MGP_129S1SvImJ_G0021124.1 mouse_genomes_project 14 24413742 24427268 - MGP_129S1SvImJ_P0038788 Phf7 protein_coding protein_coding MGP_129S1SvImJ_T0039745.1 MGP_129S1SvImJ_G0021422.1 mouse_genomes_project 14 53638482 53657041 - protein_coding retained_intron MGP_129S1SvImJ_T0039721.1 MGP_129S1SvImJ_G0021415.1 mouse_genomes_project 14 52143855 52209219 - MGP_129S1SvImJ_P0039721 Micu2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0039722.1 MGP_129S1SvImJ_G0021415.1 mouse_genomes_project 14 52143857 52238253 - MGP_129S1SvImJ_P0039722 Micu2 protein_coding protein_coding MGP_129S1SvImJ_T0003564.1 MGP_129S1SvImJ_G0003239.1 mouse_genomes_project 14 38571328 38618449 - Gm17173 antisense antisense MGP_129S1SvImJ_T0012986.1 MGP_129S1SvImJ_G0011075.1 mouse_genomes_project 14 11349165 11351460 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039767.1 MGP_129S1SvImJ_G0021431.1 mouse_genomes_project 14 54620761 54659725 + MGP_129S1SvImJ_P0039767 Mtmr6 protein_coding protein_coding MGP_129S1SvImJ_T0013053.1 MGP_129S1SvImJ_G0011142.1 mouse_genomes_project 14 95258564 95258885 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0040406.1 MGP_129S1SvImJ_G0021674.1 mouse_genomes_project 14 120439942 120493653 + Pcca protein_coding retained_intron MGP_129S1SvImJ_T0040407.1 MGP_129S1SvImJ_G0021674.1 mouse_genomes_project 14 120439949 120534061 + MGP_129S1SvImJ_P0040407 Pcca protein_coding protein_coding MGP_129S1SvImJ_T0040408.1 MGP_129S1SvImJ_G0021674.1 mouse_genomes_project 14 120439957 120807127 + MGP_129S1SvImJ_P0040408 Pcca protein_coding protein_coding MGP_129S1SvImJ_T0040409.1 MGP_129S1SvImJ_G0021674.1 mouse_genomes_project 14 120439963 120567683 + MGP_129S1SvImJ_P0040409 Pcca protein_coding protein_coding MGP_129S1SvImJ_T0040410.1 MGP_129S1SvImJ_G0021674.1 mouse_genomes_project 14 120493359 120807011 + MGP_129S1SvImJ_P0040410 Pcca protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040411.1 MGP_129S1SvImJ_G0021674.1 mouse_genomes_project 14 120518652 120581546 + Pcca protein_coding processed_transcript MGP_129S1SvImJ_T0040412.1 MGP_129S1SvImJ_G0021674.1 mouse_genomes_project 14 120630641 120650676 + MGP_129S1SvImJ_P0040412 Pcca protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040413.1 MGP_129S1SvImJ_G0021674.1 mouse_genomes_project 14 120630667 120807008 + MGP_129S1SvImJ_P0040413 Pcca protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040414.1 MGP_129S1SvImJ_G0021674.1 mouse_genomes_project 14 120630731 120729946 + Pcca protein_coding processed_transcript MGP_129S1SvImJ_T0040415.1 MGP_129S1SvImJ_G0021674.1 mouse_genomes_project 14 120650580 120730292 + Pcca protein_coding retained_intron MGP_129S1SvImJ_T0040416.1 MGP_129S1SvImJ_G0021674.1 mouse_genomes_project 14 120696008 120807003 + MGP_129S1SvImJ_P0040416 Pcca protein_coding protein_coding MGP_129S1SvImJ_T0040418.1 MGP_129S1SvImJ_G0021674.1 mouse_genomes_project 14 120793117 120808283 + Pcca protein_coding processed_transcript MGP_129S1SvImJ_T0040419.1 MGP_129S1SvImJ_G0021674.1 mouse_genomes_project 14 120804085 120807011 + Pcca protein_coding retained_intron MGP_129S1SvImJ_T0038924.1 MGP_129S1SvImJ_G0021162.1 mouse_genomes_project 14 27299267 27311970 - MGP_129S1SvImJ_P0038924 Zfp488 protein_coding protein_coding MGP_129S1SvImJ_T0003568.1 MGP_129S1SvImJ_G0003243.1 mouse_genomes_project 14 47854052 47880717 - antisense antisense MGP_129S1SvImJ_T0040145.1 MGP_129S1SvImJ_G0021569.1 mouse_genomes_project 14 70105491 70171562 + MGP_129S1SvImJ_P0040145 Zc3h13 protein_coding protein_coding MGP_129S1SvImJ_T0040146.1 MGP_129S1SvImJ_G0021569.1 mouse_genomes_project 14 70114764 70171570 + MGP_129S1SvImJ_P0040146 Zc3h13 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0039188.1 MGP_129S1SvImJ_G0021262.1 mouse_genomes_project 14 44856984 44878676 - MGP_129S1SvImJ_P0039188 Osgep protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039189.1 MGP_129S1SvImJ_G0021262.1 mouse_genomes_project 14 44865338 44878735 - MGP_129S1SvImJ_P0039189 Osgep protein_coding protein_coding MGP_129S1SvImJ_T0039190.1 MGP_129S1SvImJ_G0021262.1 mouse_genomes_project 14 44867712 44878672 - MGP_129S1SvImJ_P0039190 Osgep protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039191.1 MGP_129S1SvImJ_G0021262.1 mouse_genomes_project 14 44867716 44878714 - MGP_129S1SvImJ_P0039191 Osgep protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039192.1 MGP_129S1SvImJ_G0021262.1 mouse_genomes_project 14 44867716 44878530 - MGP_129S1SvImJ_P0039192 Osgep protein_coding protein_coding MGP_129S1SvImJ_T0039193.1 MGP_129S1SvImJ_G0021262.1 mouse_genomes_project 14 44867818 44869400 - Osgep protein_coding retained_intron MGP_129S1SvImJ_T0039194.1 MGP_129S1SvImJ_G0021262.1 mouse_genomes_project 14 44868721 44878468 - MGP_129S1SvImJ_P0039194 Osgep protein_coding protein_coding MGP_129S1SvImJ_T0039195.1 MGP_129S1SvImJ_G0021262.1 mouse_genomes_project 14 44869121 44878685 - Osgep protein_coding retained_intron MGP_129S1SvImJ_T0038556.1 MGP_129S1SvImJ_G0021067.1 mouse_genomes_project 14 18646143 18697112 - MGP_129S1SvImJ_P0038556 Zcchc24 protein_coding protein_coding MGP_129S1SvImJ_T0038557.1 MGP_129S1SvImJ_G0021067.1 mouse_genomes_project 14 18646145 18654298 - Zcchc24 protein_coding retained_intron MGP_129S1SvImJ_T0002557.1 MGP_129S1SvImJ_G0002460.1 mouse_genomes_project 14 48118168 48118227 + MGP_129S1SvImJ_P0002557 Traj30 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0100662.1 MGP_129S1SvImJ_G0038729.1 mouse_genomes_project 14 4745047 4745176 - Gm24578 snoRNA snoRNA MGP_129S1SvImJ_T0039648.1 MGP_129S1SvImJ_G0021380.1 mouse_genomes_project 14 50118835 50121347 + MGP_129S1SvImJ_P0039648 Mcpt2 protein_coding protein_coding MGP_129S1SvImJ_T0009997.1 MGP_129S1SvImJ_G0008113.1 mouse_genomes_project 14 23093551 23093616 + Mir6947 miRNA miRNA MGP_129S1SvImJ_T0038411.1 MGP_129S1SvImJ_G0021033.1 mouse_genomes_project 14 13135989 13142282 - MGP_129S1SvImJ_P0038411 Dnajc9 protein_coding protein_coding MGP_129S1SvImJ_T0038412.1 MGP_129S1SvImJ_G0021033.1 mouse_genomes_project 14 13136713 13142155 - MGP_129S1SvImJ_P0038412 Dnajc9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040047.1 MGP_129S1SvImJ_G0021541.1 mouse_genomes_project 14 65184495 65194066 + MGP_129S1SvImJ_P0040047 Lgi3 protein_coding protein_coding MGP_129S1SvImJ_T0013001.1 MGP_129S1SvImJ_G0011090.1 mouse_genomes_project 14 19541619 19542268 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039656.1 MGP_129S1SvImJ_G0021388.1 mouse_genomes_project 14 50246475 50255271 - MGP_129S1SvImJ_P0039656 Gzmn protein_coding protein_coding MGP_129S1SvImJ_T0003573.1 MGP_129S1SvImJ_G0003247.1 mouse_genomes_project 14 48953859 48955472 + Mhrt antisense antisense MGP_129S1SvImJ_T0003574.1 MGP_129S1SvImJ_G0003247.1 mouse_genomes_project 14 48953968 48961541 + Mhrt antisense antisense MGP_129S1SvImJ_T0002547.1 MGP_129S1SvImJ_G0002450.1 mouse_genomes_project 14 48104676 48104731 + MGP_129S1SvImJ_P0002547 Traj41 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0099404.1 MGP_129S1SvImJ_G0037471.1 mouse_genomes_project 14 50988714 50988773 - Gm27635 snRNA snRNA MGP_129S1SvImJ_T0002625.1 MGP_129S1SvImJ_G0002521.1 mouse_genomes_project 14 46697337 46697782 + MGP_129S1SvImJ_P0002625 Trav6-1 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0099385.1 MGP_129S1SvImJ_G0037452.1 mouse_genomes_project 14 13468074 13468181 + Gm25328 snRNA snRNA MGP_129S1SvImJ_T0002549.1 MGP_129S1SvImJ_G0002452.1 mouse_genomes_project 14 48108363 48108426 + MGP_129S1SvImJ_P0002549 Traj39 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0012983.1 MGP_129S1SvImJ_G0011072.1 mouse_genomes_project 14 5318900 5319236 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0040055.1 MGP_129S1SvImJ_G0021545.1 mouse_genomes_project 14 65241307 65259555 - MGP_129S1SvImJ_P0040055 Fam160b2 protein_coding protein_coding MGP_129S1SvImJ_T0003608.1 MGP_129S1SvImJ_G0003272.1 mouse_genomes_project 14 119752835 119754382 - 1810041H14Rik antisense antisense MGP_129S1SvImJ_T0003609.1 MGP_129S1SvImJ_G0003272.1 mouse_genomes_project 14 119752921 119754616 - 1810041H14Rik antisense antisense MGP_129S1SvImJ_T0003610.1 MGP_129S1SvImJ_G0003272.1 mouse_genomes_project 14 119752969 119755521 - 1810041H14Rik antisense antisense MGP_129S1SvImJ_T0040381.1 MGP_129S1SvImJ_G0021659.1 mouse_genomes_project 14 118651105 118690163 + MGP_129S1SvImJ_P0040381 Ipo5 protein_coding protein_coding MGP_129S1SvImJ_T0013039.1 MGP_129S1SvImJ_G0011128.1 mouse_genomes_project 14 59418764 59419083 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100701.1 MGP_129S1SvImJ_G0038768.1 mouse_genomes_project 14 90397042 90397173 - Gm23324 snoRNA snoRNA MGP_129S1SvImJ_T0099433.1 MGP_129S1SvImJ_G0037500.1 mouse_genomes_project 14 120298346 120298453 - Gm25464 snRNA snRNA MGP_129S1SvImJ_T0099384.1 MGP_129S1SvImJ_G0037451.1 mouse_genomes_project 14 11060391 11060547 + Gm22350 snRNA snRNA MGP_129S1SvImJ_T0040254.1 MGP_129S1SvImJ_G0021614.1 mouse_genomes_project 14 95303900 95314985 - MGP_129S1SvImJ_P0040254 Mzt1 protein_coding protein_coding MGP_129S1SvImJ_T0101854.1 MGP_129S1SvImJ_G0039797.1 mouse_genomes_project 14 64169285 64261663 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0100660.1 MGP_129S1SvImJ_G0038727.1 mouse_genomes_project 14 2817656 2817856 + Gm22053 snoRNA snoRNA MGP_129S1SvImJ_T0002526.1 MGP_129S1SvImJ_G0002433.1 mouse_genomes_project 14 48056847 48056898 + MGP_129S1SvImJ_P0002526 Trdj1 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0038324.1 MGP_129S1SvImJ_G0021001.1 mouse_genomes_project 14 5754310 6109085 + MGP_129S1SvImJ_P0038324 Synpr protein_coding protein_coding MGP_129S1SvImJ_T0038325.1 MGP_129S1SvImJ_G0021001.1 mouse_genomes_project 14 5939647 6047586 + MGP_129S1SvImJ_P0038325 Synpr protein_coding protein_coding MGP_129S1SvImJ_T0038326.1 MGP_129S1SvImJ_G0021001.1 mouse_genomes_project 14 5939673 6051280 + Synpr protein_coding retained_intron MGP_129S1SvImJ_T0038327.1 MGP_129S1SvImJ_G0021001.1 mouse_genomes_project 14 5939746 6109085 + MGP_129S1SvImJ_P0038327 Synpr protein_coding protein_coding MGP_129S1SvImJ_T0038328.1 MGP_129S1SvImJ_G0021001.1 mouse_genomes_project 14 5939760 6103885 + Synpr protein_coding retained_intron MGP_129S1SvImJ_T0039933.1 MGP_129S1SvImJ_G0021497.1 mouse_genomes_project 14 61483969 61493240 + MGP_129S1SvImJ_P0039933 Gm10032 protein_coding protein_coding MGP_129S1SvImJ_T0100704.1 MGP_129S1SvImJ_G0038771.1 mouse_genomes_project 14 93115055 93115147 + Gm24770 snoRNA snoRNA MGP_129S1SvImJ_T0039613.1 MGP_129S1SvImJ_G0021361.1 mouse_genomes_project 14 49703971 49713580 - MGP_129S1SvImJ_P0039613 Nedd8 protein_coding protein_coding MGP_129S1SvImJ_T0039614.1 MGP_129S1SvImJ_G0021361.1 mouse_genomes_project 14 49703973 49713613 - MGP_129S1SvImJ_P0039614 Nedd8 protein_coding protein_coding MGP_129S1SvImJ_T0038447.1 MGP_129S1SvImJ_G0021045.1 mouse_genomes_project 14 13474132 13490088 + MGP_129S1SvImJ_P0038447 Zswim8 protein_coding protein_coding MGP_129S1SvImJ_T0039374.1 MGP_129S1SvImJ_G0021305.1 mouse_genomes_project 14 48218893 48219924 - MGP_129S1SvImJ_P0039374 Olfr49 protein_coding protein_coding MGP_129S1SvImJ_T0039386.1 MGP_129S1SvImJ_G0021308.1 mouse_genomes_project 14 48372702 48375527 + MGP_129S1SvImJ_P0039386 Mrpl52 protein_coding protein_coding MGP_129S1SvImJ_T0039387.1 MGP_129S1SvImJ_G0021308.1 mouse_genomes_project 14 48372721 48373577 + Mrpl52 protein_coding retained_intron MGP_129S1SvImJ_T0039388.1 MGP_129S1SvImJ_G0021308.1 mouse_genomes_project 14 48372722 48373237 + Mrpl52 protein_coding retained_intron MGP_129S1SvImJ_T0039389.1 MGP_129S1SvImJ_G0021308.1 mouse_genomes_project 14 48372839 48375545 + Mrpl52 protein_coding retained_intron MGP_129S1SvImJ_T0039390.1 MGP_129S1SvImJ_G0021308.1 mouse_genomes_project 14 48372850 48375548 + MGP_129S1SvImJ_P0039390 Mrpl52 protein_coding protein_coding MGP_129S1SvImJ_T0039459.1 MGP_129S1SvImJ_G0021329.1 mouse_genomes_project 14 48874475 48879191 + MGP_129S1SvImJ_P0039459 Pabpn1 protein_coding protein_coding MGP_129S1SvImJ_T0039460.1 MGP_129S1SvImJ_G0021329.1 mouse_genomes_project 14 48876125 48880179 + MGP_129S1SvImJ_P0039460 Pabpn1 protein_coding protein_coding MGP_129S1SvImJ_T0039461.1 MGP_129S1SvImJ_G0021329.1 mouse_genomes_project 14 48876132 48880106 + MGP_129S1SvImJ_P0039461 Pabpn1 protein_coding protein_coding MGP_129S1SvImJ_T0039462.1 MGP_129S1SvImJ_G0021329.1 mouse_genomes_project 14 48876133 48880066 + MGP_129S1SvImJ_P0039462 Pabpn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039463.1 MGP_129S1SvImJ_G0021329.1 mouse_genomes_project 14 48876133 48880939 + MGP_129S1SvImJ_P0039463 Pabpn1 protein_coding protein_coding MGP_129S1SvImJ_T0039464.1 MGP_129S1SvImJ_G0021329.1 mouse_genomes_project 14 48876625 48880144 + MGP_129S1SvImJ_P0039464 Pabpn1 protein_coding protein_coding MGP_129S1SvImJ_T0039465.1 MGP_129S1SvImJ_G0021329.1 mouse_genomes_project 14 48876840 48877899 + MGP_129S1SvImJ_P0039465 Pabpn1 protein_coding protein_coding MGP_129S1SvImJ_T0010010.1 MGP_129S1SvImJ_G0008126.1 mouse_genomes_project 14 54576980 54577090 - Mir719 miRNA miRNA MGP_129S1SvImJ_T0040340.1 MGP_129S1SvImJ_G0021644.1 mouse_genomes_project 14 112549864 112589689 + Gpc5 protein_coding retained_intron MGP_129S1SvImJ_T0040341.1 MGP_129S1SvImJ_G0021644.1 mouse_genomes_project 14 112549899 114040770 + MGP_129S1SvImJ_P0040341 Gpc5 protein_coding protein_coding MGP_129S1SvImJ_T0040342.1 MGP_129S1SvImJ_G0021644.1 mouse_genomes_project 14 112549921 112891977 + MGP_129S1SvImJ_P0040342 Gpc5 protein_coding protein_coding MGP_129S1SvImJ_T0040343.1 MGP_129S1SvImJ_G0021644.1 mouse_genomes_project 14 112550275 114040028 + MGP_129S1SvImJ_P0040343 Gpc5 protein_coding protein_coding MGP_129S1SvImJ_T0039410.1 MGP_129S1SvImJ_G0021314.1 mouse_genomes_project 14 48526719 48538257 - MGP_129S1SvImJ_P0039410 Ajuba protein_coding protein_coding MGP_129S1SvImJ_T0010037.1 MGP_129S1SvImJ_G0008153.1 mouse_genomes_project 14 112498306 112498388 + Mir19a miRNA miRNA MGP_129S1SvImJ_T0010006.1 MGP_129S1SvImJ_G0008122.1 mouse_genomes_project 14 48933150 48933233 - Mir208a miRNA miRNA MGP_129S1SvImJ_T0002605.1 MGP_129S1SvImJ_G0002506.1 mouse_genomes_project 14 48138212 48138249 + TR_J_pseudogene TR_J_pseudogene MGP_129S1SvImJ_T0002581.1 MGP_129S1SvImJ_G0002484.1 mouse_genomes_project 14 48145607 48145673 + MGP_129S1SvImJ_P0002581 Traj3 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0002686.1 MGP_129S1SvImJ_G0002570.1 mouse_genomes_project 14 47812199 47812811 + MGP_129S1SvImJ_P0002686 Trdv1 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002687.1 MGP_129S1SvImJ_G0002570.1 mouse_genomes_project 14 47812199 47812811 + MGP_129S1SvImJ_P0002687 Trdv1 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002739.1 MGP_129S1SvImJ_G0002614.1 mouse_genomes_project 14 47298786 47298954 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0002733.1 MGP_129S1SvImJ_G0002608.1 mouse_genomes_project 14 46664486 46664985 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0013030.1 MGP_129S1SvImJ_G0011119.1 mouse_genomes_project 14 50896444 50915296 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0040190.1 MGP_129S1SvImJ_G0021585.1 mouse_genomes_project 14 72808532 72812554 - MGP_129S1SvImJ_P0040190 Gm1587 protein_coding protein_coding MGP_129S1SvImJ_T0011391.1 MGP_129S1SvImJ_G0009507.1 mouse_genomes_project 14 33938782 33938961 - Gm22726 misc_RNA misc_RNA MGP_129S1SvImJ_T0006748.1 MGP_129S1SvImJ_G0005578.1 mouse_genomes_project 14 117432071 117434411 + 1700006F04Rik lincRNA lincRNA MGP_129S1SvImJ_T0013063.1 MGP_129S1SvImJ_G0011152.1 mouse_genomes_project 14 113041709 113042309 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038721.1 MGP_129S1SvImJ_G0021115.1 mouse_genomes_project 14 24163285 24177379 + MGP_129S1SvImJ_P0038721 Glt8d1 protein_coding protein_coding MGP_129S1SvImJ_T0038722.1 MGP_129S1SvImJ_G0021115.1 mouse_genomes_project 14 24163325 24177379 + MGP_129S1SvImJ_P0038722 Glt8d1 protein_coding protein_coding MGP_129S1SvImJ_T0006686.1 MGP_129S1SvImJ_G0005531.1 mouse_genomes_project 14 25117507 25140602 + D830044D21Rik lincRNA lincRNA MGP_129S1SvImJ_T0100712.1 MGP_129S1SvImJ_G0038779.1 mouse_genomes_project 14 101545928 101546062 + Gm24280 snoRNA snoRNA MGP_129S1SvImJ_T0039443.1 MGP_129S1SvImJ_G0021322.1 mouse_genomes_project 14 48655721 48660293 + MGP_129S1SvImJ_P0039443 1700123O20Rik protein_coding protein_coding MGP_129S1SvImJ_T0039223.1 MGP_129S1SvImJ_G0021275.1 mouse_genomes_project 14 45112772 45114535 - MGP_129S1SvImJ_P0039223 Rnase1 protein_coding protein_coding MGP_129S1SvImJ_T0038935.1 MGP_129S1SvImJ_G0021170.1 mouse_genomes_project 14 27584034 27628008 - MGP_129S1SvImJ_P0038935 Fam35a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0100665.1 MGP_129S1SvImJ_G0038732.1 mouse_genomes_project 14 19469611 19469742 + Gm24031 snoRNA snoRNA MGP_129S1SvImJ_T0039004.1 MGP_129S1SvImJ_G0021197.1 mouse_genomes_project 14 34763359 34766054 + MGP_129S1SvImJ_P0039004 Sftpa1 protein_coding protein_coding MGP_129S1SvImJ_T0039005.1 MGP_129S1SvImJ_G0021197.1 mouse_genomes_project 14 34763365 34768030 + MGP_129S1SvImJ_P0039005 Sftpa1 protein_coding protein_coding MGP_129S1SvImJ_T0038405.1 MGP_129S1SvImJ_G0021030.1 mouse_genomes_project 14 13039558 13062265 + MGP_129S1SvImJ_P0038405 Nudt13 protein_coding protein_coding MGP_129S1SvImJ_T0038921.1 MGP_129S1SvImJ_G0021159.1 mouse_genomes_project 14 27254326 27267425 + MGP_129S1SvImJ_P0038921 Gdf10 protein_coding protein_coding MGP_129S1SvImJ_T0013043.1 MGP_129S1SvImJ_G0011132.1 mouse_genomes_project 14 69524714 69543670 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039506.1 MGP_129S1SvImJ_G0021342.1 mouse_genomes_project 14 49230781 49248467 + MGP_129S1SvImJ_P0039506 Dhrs2 protein_coding protein_coding MGP_129S1SvImJ_T0039507.1 MGP_129S1SvImJ_G0021342.1 mouse_genomes_project 14 49241773 49248280 + MGP_129S1SvImJ_P0039507 Dhrs2 protein_coding protein_coding MGP_129S1SvImJ_T0002642.1 MGP_129S1SvImJ_G0002534.1 mouse_genomes_project 14 46891104 46891720 + MGP_129S1SvImJ_P0002642 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0040379.1 MGP_129S1SvImJ_G0021658.1 mouse_genomes_project 14 118195125 118228893 + MGP_129S1SvImJ_P0040379 Rap2a protein_coding protein_coding MGP_129S1SvImJ_T0040380.1 MGP_129S1SvImJ_G0021658.1 mouse_genomes_project 14 118225299 118228893 + MGP_129S1SvImJ_P0040380 Rap2a protein_coding protein_coding MGP_129S1SvImJ_T0011392.1 MGP_129S1SvImJ_G0009508.1 mouse_genomes_project 14 39090791 39091074 - Gm22637 misc_RNA misc_RNA MGP_129S1SvImJ_T0012981.1 MGP_129S1SvImJ_G0011070.1 mouse_genomes_project 14 2235771 2236384 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038379.1 MGP_129S1SvImJ_G0021021.1 mouse_genomes_project 14 10894118 10948383 - MGP_129S1SvImJ_P0038379 Ube2e1 protein_coding protein_coding MGP_129S1SvImJ_T0038380.1 MGP_129S1SvImJ_G0021021.1 mouse_genomes_project 14 10896291 10947555 - Ube2e1 protein_coding retained_intron MGP_129S1SvImJ_T0038381.1 MGP_129S1SvImJ_G0021021.1 mouse_genomes_project 14 10896591 10943882 - Ube2e1 protein_coding processed_transcript MGP_129S1SvImJ_T0038382.1 MGP_129S1SvImJ_G0021021.1 mouse_genomes_project 14 10939254 10947618 - Ube2e1 protein_coding retained_intron MGP_129S1SvImJ_T0038563.1 MGP_129S1SvImJ_G0021070.1 mouse_genomes_project 14 18831203 18846192 - MGP_129S1SvImJ_P0038563 Plac9a protein_coding protein_coding MGP_129S1SvImJ_T0038567.1 MGP_129S1SvImJ_G0021070.1 mouse_genomes_project 14 18831676 18845568 - MGP_129S1SvImJ_P0038567 Plac9a protein_coding protein_coding MGP_129S1SvImJ_T0017451.1 MGP_129S1SvImJ_G0015281.1 mouse_genomes_project 14 102082051 102088869 + 4930449E01Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017452.1 MGP_129S1SvImJ_G0015281.1 mouse_genomes_project 14 102084183 102084543 + 4930449E01Rik processed_transcript TEC MGP_129S1SvImJ_T0017453.1 MGP_129S1SvImJ_G0015281.1 mouse_genomes_project 14 102086823 102088876 + 4930449E01Rik processed_transcript lincRNA MGP_129S1SvImJ_T0003584.1 MGP_129S1SvImJ_G0003255.1 mouse_genomes_project 14 55122683 55132241 - Mipepos antisense antisense MGP_129S1SvImJ_T0010009.1 MGP_129S1SvImJ_G0008125.1 mouse_genomes_project 14 52016730 52016794 + Mir3077 miRNA miRNA MGP_129S1SvImJ_T0040374.1 MGP_129S1SvImJ_G0021655.1 mouse_genomes_project 14 116780386 117558444 + MGP_129S1SvImJ_P0040374 Hs6st3 protein_coding protein_coding MGP_129S1SvImJ_T0003565.1 MGP_129S1SvImJ_G0003240.1 mouse_genomes_project 14 39226072 39236822 + Gm15601 antisense antisense MGP_129S1SvImJ_T0039763.1 MGP_129S1SvImJ_G0021429.1 mouse_genomes_project 14 54425103 54434838 + MGP_129S1SvImJ_P0039763 4930563I02Rik protein_coding protein_coding MGP_129S1SvImJ_T0039764.1 MGP_129S1SvImJ_G0021429.1 mouse_genomes_project 14 54425549 54434848 + MGP_129S1SvImJ_P0039764 4930563I02Rik protein_coding protein_coding MGP_129S1SvImJ_T0013009.1 MGP_129S1SvImJ_G0011098.1 mouse_genomes_project 14 38826111 38827021 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038883.1 MGP_129S1SvImJ_G0021148.1 mouse_genomes_project 14 25853389 25906531 + MGP_129S1SvImJ_P0038883 Prrxl1 protein_coding protein_coding MGP_129S1SvImJ_T0038884.1 MGP_129S1SvImJ_G0021148.1 mouse_genomes_project 14 25853390 25884219 + MGP_129S1SvImJ_P0038884 Prrxl1 protein_coding protein_coding MGP_129S1SvImJ_T0038885.1 MGP_129S1SvImJ_G0021148.1 mouse_genomes_project 14 25853523 25884192 + MGP_129S1SvImJ_P0038885 Prrxl1 protein_coding protein_coding MGP_129S1SvImJ_T0038886.1 MGP_129S1SvImJ_G0021148.1 mouse_genomes_project 14 25853849 25906573 + MGP_129S1SvImJ_P0038886 Prrxl1 protein_coding protein_coding MGP_129S1SvImJ_T0040206.1 MGP_129S1SvImJ_G0021595.1 mouse_genomes_project 14 74452155 74462479 - Naa16 protein_coding retained_intron MGP_129S1SvImJ_T0040207.1 MGP_129S1SvImJ_G0021595.1 mouse_genomes_project 14 74452458 74516971 - MGP_129S1SvImJ_P0040207 Naa16 protein_coding protein_coding MGP_129S1SvImJ_T0040208.1 MGP_129S1SvImJ_G0021595.1 mouse_genomes_project 14 74460258 74513333 - MGP_129S1SvImJ_P0040208 Naa16 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040209.1 MGP_129S1SvImJ_G0021595.1 mouse_genomes_project 14 74469852 74516808 - MGP_129S1SvImJ_P0040209 Naa16 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040210.1 MGP_129S1SvImJ_G0021595.1 mouse_genomes_project 14 74491233 74516885 - MGP_129S1SvImJ_P0040210 Naa16 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040211.1 MGP_129S1SvImJ_G0021595.1 mouse_genomes_project 14 74510831 74516883 - Naa16 protein_coding retained_intron MGP_129S1SvImJ_T0012989.1 MGP_129S1SvImJ_G0011078.1 mouse_genomes_project 14 11739967 11755560 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0040106.1 MGP_129S1SvImJ_G0021556.1 mouse_genomes_project 14 67975400 67980795 + MGP_129S1SvImJ_P0040106 Lpar6 protein_coding protein_coding MGP_129S1SvImJ_T0002533.1 MGP_129S1SvImJ_G0002438.1 mouse_genomes_project 14 48086090 48086153 + MGP_129S1SvImJ_P0002533 Traj56 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0040133.1 MGP_129S1SvImJ_G0021567.1 mouse_genomes_project 14 69940158 70013986 + MGP_129S1SvImJ_P0040133 Lcp1 protein_coding protein_coding MGP_129S1SvImJ_T0040134.1 MGP_129S1SvImJ_G0021567.1 mouse_genomes_project 14 69940216 69960825 + Lcp1 protein_coding processed_transcript MGP_129S1SvImJ_T0040135.1 MGP_129S1SvImJ_G0021567.1 mouse_genomes_project 14 69940216 70015297 + MGP_129S1SvImJ_P0040135 Lcp1 protein_coding protein_coding MGP_129S1SvImJ_T0040136.1 MGP_129S1SvImJ_G0021567.1 mouse_genomes_project 14 69940556 70015246 + MGP_129S1SvImJ_P0040136 Lcp1 protein_coding protein_coding MGP_129S1SvImJ_T0040137.1 MGP_129S1SvImJ_G0021567.1 mouse_genomes_project 14 69940611 70045370 + MGP_129S1SvImJ_P0040137 Lcp1 protein_coding protein_coding MGP_129S1SvImJ_T0040138.1 MGP_129S1SvImJ_G0021567.1 mouse_genomes_project 14 69945385 70046416 + MGP_129S1SvImJ_P0040138 Lcp1 protein_coding protein_coding MGP_129S1SvImJ_T0040139.1 MGP_129S1SvImJ_G0021567.1 mouse_genomes_project 14 69945528 70015237 + MGP_129S1SvImJ_P0040139 Lcp1 protein_coding protein_coding MGP_129S1SvImJ_T0040140.1 MGP_129S1SvImJ_G0021567.1 mouse_genomes_project 14 69988903 69991980 + Lcp1 protein_coding retained_intron MGP_129S1SvImJ_T0040141.1 MGP_129S1SvImJ_G0021567.1 mouse_genomes_project 14 69990164 70012130 + Lcp1 protein_coding processed_transcript MGP_129S1SvImJ_T0040142.1 MGP_129S1SvImJ_G0021567.1 mouse_genomes_project 14 70004322 70046390 + MGP_129S1SvImJ_P0040142 Lcp1 protein_coding protein_coding MGP_129S1SvImJ_T0040143.1 MGP_129S1SvImJ_G0021567.1 mouse_genomes_project 14 70011887 70013908 + Lcp1 protein_coding processed_transcript MGP_129S1SvImJ_T0039892.1 MGP_129S1SvImJ_G0021486.1 mouse_genomes_project 14 60472697 60503357 + MGP_129S1SvImJ_P0039892 Ccdc25 protein_coding protein_coding MGP_129S1SvImJ_T0039893.1 MGP_129S1SvImJ_G0021486.1 mouse_genomes_project 14 60472852 60505236 + MGP_129S1SvImJ_P0039893 Ccdc25 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0039654.1 MGP_129S1SvImJ_G0021386.1 mouse_genomes_project 14 50204398 50207451 - MGP_129S1SvImJ_P0039654 Gzmd protein_coding protein_coding MGP_129S1SvImJ_T0039645.1 MGP_129S1SvImJ_G0021377.1 mouse_genomes_project 14 49956880 49959827 - MGP_129S1SvImJ_P0039645 Sdr39u1 protein_coding protein_coding MGP_129S1SvImJ_T0002746.1 MGP_129S1SvImJ_G0002621.1 mouse_genomes_project 14 47864812 47865431 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0099399.1 MGP_129S1SvImJ_G0037466.1 mouse_genomes_project 14 44668387 44668494 + Gm24316 snRNA snRNA MGP_129S1SvImJ_T0013044.1 MGP_129S1SvImJ_G0011133.1 mouse_genomes_project 14 69524714 69543672 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002647.1 MGP_129S1SvImJ_G0002539.1 mouse_genomes_project 14 46953290 47664501 + MGP_129S1SvImJ_P0002647 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0039445.1 MGP_129S1SvImJ_G0021324.1 mouse_genomes_project 14 48692966 48752315 - MGP_129S1SvImJ_P0039445 Slc7a8 protein_coding protein_coding MGP_129S1SvImJ_T0038413.1 MGP_129S1SvImJ_G0021034.1 mouse_genomes_project 14 13144599 13152001 - MGP_129S1SvImJ_P0038413 Mrps16 protein_coding protein_coding MGP_129S1SvImJ_T0038585.1 MGP_129S1SvImJ_G0021078.1 mouse_genomes_project 14 18928857 18938307 + MGP_129S1SvImJ_P0038585 Duxbl3 protein_coding protein_coding MGP_129S1SvImJ_T0038586.1 MGP_129S1SvImJ_G0021078.1 mouse_genomes_project 14 18929175 18938498 + MGP_129S1SvImJ_P0038586 Duxbl3 protein_coding protein_coding MGP_129S1SvImJ_T0038588.1 MGP_129S1SvImJ_G0021078.1 mouse_genomes_project 14 18929813 18936367 + MGP_129S1SvImJ_P0038588 Duxbl3 protein_coding protein_coding MGP_129S1SvImJ_T0038590.1 MGP_129S1SvImJ_G0021078.1 mouse_genomes_project 14 18930147 18937105 + Duxbl3 protein_coding processed_transcript MGP_129S1SvImJ_T0038593.1 MGP_129S1SvImJ_G0021078.1 mouse_genomes_project 14 18932578 18939677 + MGP_129S1SvImJ_P0038593 Duxbl3 protein_coding protein_coding MGP_129S1SvImJ_T0040198.1 MGP_129S1SvImJ_G0021590.1 mouse_genomes_project 14 73554430 73599189 - MGP_129S1SvImJ_P0040198 Akap11 protein_coding protein_coding MGP_129S1SvImJ_T0040199.1 MGP_129S1SvImJ_G0021590.1 mouse_genomes_project 14 73554430 73599241 - MGP_129S1SvImJ_P0040199 Akap11 protein_coding protein_coding MGP_129S1SvImJ_T0006744.1 MGP_129S1SvImJ_G0005574.1 mouse_genomes_project 14 115670465 115681960 + Gm26773 lincRNA lincRNA MGP_129S1SvImJ_T0039209.1 MGP_129S1SvImJ_G0021265.1 mouse_genomes_project 14 44899690 44909031 + MGP_129S1SvImJ_P0039209 Pnp protein_coding protein_coding MGP_129S1SvImJ_T0039210.1 MGP_129S1SvImJ_G0021265.1 mouse_genomes_project 14 44899895 44907649 + MGP_129S1SvImJ_P0039210 Pnp protein_coding protein_coding MGP_129S1SvImJ_T0040294.1 MGP_129S1SvImJ_G0021626.1 mouse_genomes_project 14 99461782 99467843 - MGP_129S1SvImJ_P0040294 Kctd12 protein_coding protein_coding MGP_129S1SvImJ_T0040295.1 MGP_129S1SvImJ_G0021626.1 mouse_genomes_project 14 99462734 99466757 - Kctd12 protein_coding processed_transcript MGP_129S1SvImJ_T0039000.1 MGP_129S1SvImJ_G0021195.1 mouse_genomes_project 14 34704113 34723928 + MGP_129S1SvImJ_P0039000 Dydc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039001.1 MGP_129S1SvImJ_G0021195.1 mouse_genomes_project 14 34704113 34723935 + MGP_129S1SvImJ_P0039001 Dydc1 protein_coding protein_coding MGP_129S1SvImJ_T0039002.1 MGP_129S1SvImJ_G0021195.1 mouse_genomes_project 14 34704142 34723931 + MGP_129S1SvImJ_P0039002 Dydc1 protein_coding protein_coding MGP_129S1SvImJ_T0099401.1 MGP_129S1SvImJ_G0037468.1 mouse_genomes_project 14 46386395 46386499 + Gm26328 snRNA snRNA MGP_129S1SvImJ_T0002641.1 MGP_129S1SvImJ_G0002533.1 mouse_genomes_project 14 46861124 46861655 + MGP_129S1SvImJ_P0002641 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0039788.1 MGP_129S1SvImJ_G0021438.1 mouse_genomes_project 14 55587103 55630434 - MGP_129S1SvImJ_P0039788 Sgcg protein_coding protein_coding MGP_129S1SvImJ_T0039789.1 MGP_129S1SvImJ_G0021438.1 mouse_genomes_project 14 55587488 55630368 - MGP_129S1SvImJ_P0039789 Sgcg protein_coding protein_coding MGP_129S1SvImJ_T0039790.1 MGP_129S1SvImJ_G0021438.1 mouse_genomes_project 14 55588860 55598482 - MGP_129S1SvImJ_P0039790 Sgcg protein_coding protein_coding MGP_129S1SvImJ_T0040297.1 MGP_129S1SvImJ_G0021628.1 mouse_genomes_project 14 99559746 99567115 + MGP_129S1SvImJ_P0040297 Cln5 protein_coding protein_coding MGP_129S1SvImJ_T0038407.1 MGP_129S1SvImJ_G0021032.1 mouse_genomes_project 14 13094511 13117756 + MGP_129S1SvImJ_P0038407 Fam149b protein_coding protein_coding MGP_129S1SvImJ_T0038408.1 MGP_129S1SvImJ_G0021032.1 mouse_genomes_project 14 13094511 13134845 + MGP_129S1SvImJ_P0038408 Fam149b protein_coding protein_coding MGP_129S1SvImJ_T0038409.1 MGP_129S1SvImJ_G0021032.1 mouse_genomes_project 14 13094511 13134845 + MGP_129S1SvImJ_P0038409 Fam149b protein_coding protein_coding MGP_129S1SvImJ_T0038410.1 MGP_129S1SvImJ_G0021032.1 mouse_genomes_project 14 13094571 13134845 + MGP_129S1SvImJ_P0038410 Fam149b protein_coding protein_coding MGP_129S1SvImJ_T0039148.1 MGP_129S1SvImJ_G0021232.1 mouse_genomes_project 14 43208577 43459674 - MGP_129S1SvImJ_P0039148 Slc35f4 protein_coding protein_coding MGP_129S1SvImJ_T0039149.1 MGP_129S1SvImJ_G0021232.1 mouse_genomes_project 14 43208577 43459653 - MGP_129S1SvImJ_P0039149 Slc35f4 protein_coding protein_coding MGP_129S1SvImJ_T0039150.1 MGP_129S1SvImJ_G0021232.1 mouse_genomes_project 14 43217299 43233470 - Slc35f4 protein_coding processed_transcript MGP_129S1SvImJ_T0039151.1 MGP_129S1SvImJ_G0021232.1 mouse_genomes_project 14 43231350 43459834 - MGP_129S1SvImJ_P0039151 Slc35f4 protein_coding protein_coding MGP_129S1SvImJ_T0039152.1 MGP_129S1SvImJ_G0021232.1 mouse_genomes_project 14 43236318 43459641 - Slc35f4 protein_coding retained_intron MGP_129S1SvImJ_T0002742.1 MGP_129S1SvImJ_G0002617.1 mouse_genomes_project 14 47499733 47500002 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0038274.1 MGP_129S1SvImJ_G0020983.1 mouse_genomes_project 14 108603 109079 + MGP_129S1SvImJ_P0038274 Gm26661 protein_coding protein_coding MGP_129S1SvImJ_T0039485.1 MGP_129S1SvImJ_G0021339.1 mouse_genomes_project 14 49061169 49093251 - MGP_129S1SvImJ_P0039485 Zfhx2 protein_coding protein_coding MGP_129S1SvImJ_T0039486.1 MGP_129S1SvImJ_G0021339.1 mouse_genomes_project 14 49067110 49073136 - Zfhx2 protein_coding retained_intron MGP_129S1SvImJ_T0039487.1 MGP_129S1SvImJ_G0021339.1 mouse_genomes_project 14 49075473 49081379 - Zfhx2 protein_coding retained_intron MGP_129S1SvImJ_T0039488.1 MGP_129S1SvImJ_G0021339.1 mouse_genomes_project 14 49090498 49092969 - Zfhx2 protein_coding retained_intron MGP_129S1SvImJ_T0013015.1 MGP_129S1SvImJ_G0011104.1 mouse_genomes_project 14 46426463 46427230 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038629.1 MGP_129S1SvImJ_G0021087.1 mouse_genomes_project 14 19907488 19961396 - MGP_129S1SvImJ_P0038629 Appl1 protein_coding protein_coding MGP_129S1SvImJ_T0038630.1 MGP_129S1SvImJ_G0021087.1 mouse_genomes_project 14 19939300 19947247 - Appl1 protein_coding retained_intron MGP_129S1SvImJ_T0038631.1 MGP_129S1SvImJ_G0021087.1 mouse_genomes_project 14 19940597 19960663 - Appl1 protein_coding retained_intron MGP_129S1SvImJ_T0038632.1 MGP_129S1SvImJ_G0021087.1 mouse_genomes_project 14 19952769 19960626 - Appl1 protein_coding retained_intron MGP_129S1SvImJ_T0000940.1 MGP_129S1SvImJ_G0000872.1 mouse_genomes_project 14 56075323 56079375 - TEC TEC MGP_129S1SvImJ_T0099414.1 MGP_129S1SvImJ_G0037481.1 mouse_genomes_project 14 85020370 85020484 + Gm25886 snRNA snRNA MGP_129S1SvImJ_T0040182.1 MGP_129S1SvImJ_G0021582.1 mouse_genomes_project 14 72008559 72029060 - MGP_129S1SvImJ_P0040182 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040183.1 MGP_129S1SvImJ_G0021582.1 mouse_genomes_project 14 72024737 72029369 - protein_coding retained_intron MGP_129S1SvImJ_T0040184.1 MGP_129S1SvImJ_G0021582.1 mouse_genomes_project 14 72027391 72028547 - MGP_129S1SvImJ_P0040184 protein_coding protein_coding MGP_129S1SvImJ_T0038647.1 MGP_129S1SvImJ_G0021096.1 mouse_genomes_project 14 21968460 22818352 - MGP_129S1SvImJ_P0038647 Cacna2d3 protein_coding protein_coding MGP_129S1SvImJ_T0006730.1 MGP_129S1SvImJ_G0005563.1 mouse_genomes_project 14 64102838 64111912 - Gm27174 lincRNA lincRNA MGP_129S1SvImJ_T0038461.1 MGP_129S1SvImJ_G0021051.1 mouse_genomes_project 14 13852986 14283329 + MGP_129S1SvImJ_P0038461 Adk protein_coding protein_coding MGP_129S1SvImJ_T0038462.1 MGP_129S1SvImJ_G0021051.1 mouse_genomes_project 14 13878598 14282699 + MGP_129S1SvImJ_P0038462 Adk protein_coding unknown_likely_coding MGP_129S1SvImJ_T0039174.1 MGP_129S1SvImJ_G0021248.1 mouse_genomes_project 14 44342285 44343328 + MGP_129S1SvImJ_P0039174 protein_coding protein_coding MGP_129S1SvImJ_T0039873.1 MGP_129S1SvImJ_G0021476.1 mouse_genomes_project 14 59641647 59687764 - MGP_129S1SvImJ_P0039873 Extl3 protein_coding protein_coding MGP_129S1SvImJ_T0102244.1 MGP_129S1SvImJ_G0040078.1 mouse_genomes_project 14 45182041 45182396 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0039184.1 MGP_129S1SvImJ_G0021258.1 mouse_genomes_project 14 44758755 44771663 + MGP_129S1SvImJ_P0039184 Parp2 protein_coding protein_coding MGP_129S1SvImJ_T0040337.1 MGP_129S1SvImJ_G0021641.1 mouse_genomes_project 14 105719953 105724202 - MGP_129S1SvImJ_P0040337 Slitrk1 protein_coding protein_coding MGP_129S1SvImJ_T0039008.1 MGP_129S1SvImJ_G0021200.1 mouse_genomes_project 14 37552478 37557041 + MGP_129S1SvImJ_P0039008 Ang5 protein_coding protein_coding MGP_129S1SvImJ_T0010005.1 MGP_129S1SvImJ_G0008121.1 mouse_genomes_project 14 48609146 48609208 - Mir6948 miRNA miRNA MGP_129S1SvImJ_T0038828.1 MGP_129S1SvImJ_G0021134.1 mouse_genomes_project 14 24894923 24979656 - MGP_129S1SvImJ_P0038828 Ankrd28 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0038829.1 MGP_129S1SvImJ_G0021134.1 mouse_genomes_project 14 24896174 25029742 - MGP_129S1SvImJ_P0038829 Ankrd28 protein_coding protein_coding MGP_129S1SvImJ_T0040338.1 MGP_129S1SvImJ_G0021642.1 mouse_genomes_project 14 107678468 107685006 - MGP_129S1SvImJ_P0040338 Slitrk6 protein_coding protein_coding MGP_129S1SvImJ_T0038680.1 MGP_129S1SvImJ_G0021106.1 mouse_genomes_project 14 23788862 23827842 + MGP_129S1SvImJ_P0038680 Rft1 protein_coding protein_coding MGP_129S1SvImJ_T0038681.1 MGP_129S1SvImJ_G0021106.1 mouse_genomes_project 14 23788877 23796804 + Rft1 protein_coding processed_transcript MGP_129S1SvImJ_T0038682.1 MGP_129S1SvImJ_G0021106.1 mouse_genomes_project 14 23788885 23800122 + Rft1 protein_coding processed_transcript MGP_129S1SvImJ_T0038683.1 MGP_129S1SvImJ_G0021106.1 mouse_genomes_project 14 23788889 23801295 + Rft1 protein_coding retained_intron MGP_129S1SvImJ_T0038684.1 MGP_129S1SvImJ_G0021106.1 mouse_genomes_project 14 23788909 23827842 + MGP_129S1SvImJ_P0038684 Rft1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038685.1 MGP_129S1SvImJ_G0021106.1 mouse_genomes_project 14 23788909 23827842 + MGP_129S1SvImJ_P0038685 Rft1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038686.1 MGP_129S1SvImJ_G0021106.1 mouse_genomes_project 14 23819031 23826479 + Rft1 protein_coding processed_transcript MGP_129S1SvImJ_T0000931.1 MGP_129S1SvImJ_G0000863.1 mouse_genomes_project 14 39707145 39728227 - TEC TEC MGP_129S1SvImJ_T0003577.1 MGP_129S1SvImJ_G0003250.1 mouse_genomes_project 14 49073991 49076779 + Zfhx2os antisense antisense MGP_129S1SvImJ_T0038881.1 MGP_129S1SvImJ_G0021146.1 mouse_genomes_project 14 25712287 25714701 - MGP_129S1SvImJ_P0038881 Slc18a3 protein_coding protein_coding MGP_129S1SvImJ_T0100714.1 MGP_129S1SvImJ_G0038781.1 mouse_genomes_project 14 103359040 103359167 + Gm23437 snoRNA snoRNA MGP_129S1SvImJ_T0040144.1 MGP_129S1SvImJ_G0021568.1 mouse_genomes_project 14 70058711 70104670 + MGP_129S1SvImJ_P0040144 Cpb2 protein_coding protein_coding MGP_129S1SvImJ_T0100710.1 MGP_129S1SvImJ_G0038777.1 mouse_genomes_project 14 98770286 98770418 - Gm22347 snoRNA snoRNA MGP_129S1SvImJ_T0011386.1 MGP_129S1SvImJ_G0009502.1 mouse_genomes_project 14 14081841 14082077 + Gm26372 misc_RNA misc_RNA MGP_129S1SvImJ_T0002660.1 MGP_129S1SvImJ_G0002550.1 mouse_genomes_project 14 47259890 47260467 + MGP_129S1SvImJ_P0002660 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002661.1 MGP_129S1SvImJ_G0002550.1 mouse_genomes_project 14 47260190 47260465 + MGP_129S1SvImJ_P0002661 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0013033.1 MGP_129S1SvImJ_G0011122.1 mouse_genomes_project 14 52346206 52346564 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013006.1 MGP_129S1SvImJ_G0011095.1 mouse_genomes_project 14 33615221 33615557 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0040350.1 MGP_129S1SvImJ_G0021648.1 mouse_genomes_project 14 115702069 115730039 + MGP_129S1SvImJ_P0040350 Gpr180 protein_coding protein_coding MGP_129S1SvImJ_T0017464.1 MGP_129S1SvImJ_G0015288.1 mouse_genomes_project 14 120830988 120846589 + 4930594M22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017465.1 MGP_129S1SvImJ_G0015288.1 mouse_genomes_project 14 120831025 120848341 + 4930594M22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017466.1 MGP_129S1SvImJ_G0015288.1 mouse_genomes_project 14 120831033 120856372 + 4930594M22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0038805.1 MGP_129S1SvImJ_G0021129.1 mouse_genomes_project 14 24666228 24683375 - MGP_129S1SvImJ_P0038805 Mettl6 protein_coding protein_coding MGP_129S1SvImJ_T0039162.1 MGP_129S1SvImJ_G0021239.1 mouse_genomes_project 14 44100557 44101514 - MGP_129S1SvImJ_P0039162 protein_coding protein_coding MGP_129S1SvImJ_T0039940.1 MGP_129S1SvImJ_G0021501.1 mouse_genomes_project 14 61693740 61719571 - MGP_129S1SvImJ_P0039940 Bnip3l protein_coding protein_coding MGP_129S1SvImJ_T0039941.1 MGP_129S1SvImJ_G0021501.1 mouse_genomes_project 14 61693740 61719592 - MGP_129S1SvImJ_P0039941 Bnip3l protein_coding protein_coding MGP_129S1SvImJ_T0039942.1 MGP_129S1SvImJ_G0021501.1 mouse_genomes_project 14 61693750 61719502 - MGP_129S1SvImJ_P0039942 Bnip3l protein_coding unknown_likely_coding MGP_129S1SvImJ_T0039943.1 MGP_129S1SvImJ_G0021501.1 mouse_genomes_project 14 61695774 61698727 - Bnip3l protein_coding processed_transcript MGP_129S1SvImJ_T0039944.1 MGP_129S1SvImJ_G0021501.1 mouse_genomes_project 14 61698131 61708788 - Bnip3l protein_coding processed_transcript MGP_129S1SvImJ_T0039945.1 MGP_129S1SvImJ_G0021501.1 mouse_genomes_project 14 61698310 61709391 - Bnip3l protein_coding processed_transcript MGP_129S1SvImJ_T0039946.1 MGP_129S1SvImJ_G0021501.1 mouse_genomes_project 14 61698319 61708611 - Bnip3l protein_coding processed_transcript MGP_129S1SvImJ_T0039947.1 MGP_129S1SvImJ_G0021501.1 mouse_genomes_project 14 61702434 61708543 - Bnip3l protein_coding retained_intron MGP_129S1SvImJ_T0010032.1 MGP_129S1SvImJ_G0008148.1 mouse_genomes_project 14 102214062 102214191 - Mir6390 miRNA miRNA MGP_129S1SvImJ_T0039284.1 MGP_129S1SvImJ_G0021291.1 mouse_genomes_project 14 46142107 46193589 + MGP_129S1SvImJ_P0039284 Rpgrip1 protein_coding protein_coding MGP_129S1SvImJ_T0039285.1 MGP_129S1SvImJ_G0021291.1 mouse_genomes_project 14 46142307 46192726 + MGP_129S1SvImJ_P0039285 Rpgrip1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039286.1 MGP_129S1SvImJ_G0021291.1 mouse_genomes_project 14 46142326 46152887 + Rpgrip1 protein_coding retained_intron MGP_129S1SvImJ_T0039287.1 MGP_129S1SvImJ_G0021291.1 mouse_genomes_project 14 46142333 46191708 + Rpgrip1 protein_coding retained_intron MGP_129S1SvImJ_T0039288.1 MGP_129S1SvImJ_G0021291.1 mouse_genomes_project 14 46142343 46193621 + MGP_129S1SvImJ_P0039288 Rpgrip1 protein_coding protein_coding MGP_129S1SvImJ_T0039289.1 MGP_129S1SvImJ_G0021291.1 mouse_genomes_project 14 46143594 46192498 + MGP_129S1SvImJ_P0039289 Rpgrip1 protein_coding protein_coding MGP_129S1SvImJ_T0039290.1 MGP_129S1SvImJ_G0021291.1 mouse_genomes_project 14 46145989 46167563 + Rpgrip1 protein_coding retained_intron MGP_129S1SvImJ_T0039291.1 MGP_129S1SvImJ_G0021291.1 mouse_genomes_project 14 46150968 46151550 + Rpgrip1 protein_coding retained_intron MGP_129S1SvImJ_T0039292.1 MGP_129S1SvImJ_G0021291.1 mouse_genomes_project 14 46153109 46173289 + MGP_129S1SvImJ_P0039292 Rpgrip1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039293.1 MGP_129S1SvImJ_G0021291.1 mouse_genomes_project 14 46169232 46182006 + Rpgrip1 protein_coding retained_intron MGP_129S1SvImJ_T0039294.1 MGP_129S1SvImJ_G0021291.1 mouse_genomes_project 14 46169277 46193620 + Rpgrip1 protein_coding retained_intron MGP_129S1SvImJ_T0039295.1 MGP_129S1SvImJ_G0021291.1 mouse_genomes_project 14 46178053 46181908 + MGP_129S1SvImJ_P0039295 Rpgrip1 protein_coding protein_coding MGP_129S1SvImJ_T0039296.1 MGP_129S1SvImJ_G0021291.1 mouse_genomes_project 14 46178113 46183122 + MGP_129S1SvImJ_P0039296 Rpgrip1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039297.1 MGP_129S1SvImJ_G0021291.1 mouse_genomes_project 14 46179688 46182098 + Rpgrip1 protein_coding retained_intron MGP_129S1SvImJ_T0039298.1 MGP_129S1SvImJ_G0021291.1 mouse_genomes_project 14 46182119 46192576 + MGP_129S1SvImJ_P0039298 Rpgrip1 protein_coding protein_coding MGP_129S1SvImJ_T0039299.1 MGP_129S1SvImJ_G0021291.1 mouse_genomes_project 14 46182202 46183342 + Rpgrip1 protein_coding retained_intron MGP_129S1SvImJ_T0039300.1 MGP_129S1SvImJ_G0021291.1 mouse_genomes_project 14 46183068 46192420 + MGP_129S1SvImJ_P0039300 Rpgrip1 protein_coding protein_coding MGP_129S1SvImJ_T0039301.1 MGP_129S1SvImJ_G0021291.1 mouse_genomes_project 14 46184660 46188658 + Rpgrip1 protein_coding retained_intron MGP_129S1SvImJ_T0039302.1 MGP_129S1SvImJ_G0021291.1 mouse_genomes_project 14 46190733 46195829 + MGP_129S1SvImJ_P0039302 Rpgrip1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0010013.1 MGP_129S1SvImJ_G0008129.1 mouse_genomes_project 14 57303722 57303859 + Mir8098 miRNA miRNA MGP_129S1SvImJ_T0039583.1 MGP_129S1SvImJ_G0021357.1 mouse_genomes_project 14 49666479 49676764 - MGP_129S1SvImJ_P0039583 Ipo4 protein_coding protein_coding MGP_129S1SvImJ_T0039584.1 MGP_129S1SvImJ_G0021357.1 mouse_genomes_project 14 49666713 49676711 - MGP_129S1SvImJ_P0039584 Ipo4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039585.1 MGP_129S1SvImJ_G0021357.1 mouse_genomes_project 14 49666795 49667512 - Ipo4 protein_coding retained_intron MGP_129S1SvImJ_T0039586.1 MGP_129S1SvImJ_G0021357.1 mouse_genomes_project 14 49666798 49668643 - Ipo4 protein_coding processed_transcript MGP_129S1SvImJ_T0039587.1 MGP_129S1SvImJ_G0021357.1 mouse_genomes_project 14 49666801 49667497 - Ipo4 protein_coding processed_transcript MGP_129S1SvImJ_T0039588.1 MGP_129S1SvImJ_G0021357.1 mouse_genomes_project 14 49666803 49668470 - Ipo4 protein_coding retained_intron MGP_129S1SvImJ_T0039589.1 MGP_129S1SvImJ_G0021357.1 mouse_genomes_project 14 49666819 49677037 - MGP_129S1SvImJ_P0039589 Ipo4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039590.1 MGP_129S1SvImJ_G0021357.1 mouse_genomes_project 14 49666975 49678975 - Ipo4 protein_coding processed_transcript MGP_129S1SvImJ_T0039591.1 MGP_129S1SvImJ_G0021357.1 mouse_genomes_project 14 49668377 49669004 - Ipo4 protein_coding retained_intron MGP_129S1SvImJ_T0039592.1 MGP_129S1SvImJ_G0021357.1 mouse_genomes_project 14 49669862 49671740 - Ipo4 protein_coding retained_intron MGP_129S1SvImJ_T0039593.1 MGP_129S1SvImJ_G0021357.1 mouse_genomes_project 14 49674007 49674738 - Ipo4 protein_coding retained_intron MGP_129S1SvImJ_T0039594.1 MGP_129S1SvImJ_G0021357.1 mouse_genomes_project 14 49674836 49676290 - Ipo4 protein_coding retained_intron MGP_129S1SvImJ_T0039595.1 MGP_129S1SvImJ_G0021357.1 mouse_genomes_project 14 49675127 49676649 - Ipo4 protein_coding retained_intron MGP_129S1SvImJ_T0000938.1 MGP_129S1SvImJ_G0000870.1 mouse_genomes_project 14 49087179 49088218 - TEC TEC MGP_129S1SvImJ_T0102248.1 MGP_129S1SvImJ_G0040082.1 mouse_genomes_project 14 45863385 45863847 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0039221.1 MGP_129S1SvImJ_G0021273.1 mouse_genomes_project 14 45082125 45085348 + MGP_129S1SvImJ_P0039221 Eddm3b protein_coding protein_coding MGP_129S1SvImJ_T0039984.1 MGP_129S1SvImJ_G0021520.1 mouse_genomes_project 14 64112003 64141878 + MGP_129S1SvImJ_P0039984 protein_coding protein_coding MGP_129S1SvImJ_T0039985.1 MGP_129S1SvImJ_G0021520.1 mouse_genomes_project 14 64112019 64125007 + protein_coding retained_intron MGP_129S1SvImJ_T0039986.1 MGP_129S1SvImJ_G0021520.1 mouse_genomes_project 14 64112027 64125008 + MGP_129S1SvImJ_P0039986 protein_coding protein_coding MGP_129S1SvImJ_T0039987.1 MGP_129S1SvImJ_G0021520.1 mouse_genomes_project 14 64112045 64122232 + protein_coding processed_transcript MGP_129S1SvImJ_T0039989.1 MGP_129S1SvImJ_G0021520.1 mouse_genomes_project 14 64137164 64140824 + protein_coding retained_intron MGP_129S1SvImJ_T0100693.1 MGP_129S1SvImJ_G0038760.1 mouse_genomes_project 14 70856934 70857068 - Gm25517 snoRNA snoRNA MGP_129S1SvImJ_T0038979.1 MGP_129S1SvImJ_G0021185.1 mouse_genomes_project 14 30555022 30565914 + MGP_129S1SvImJ_P0038979 Lrit1 protein_coding protein_coding MGP_129S1SvImJ_T0013064.1 MGP_129S1SvImJ_G0011153.1 mouse_genomes_project 14 120373871 120379080 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003561.1 MGP_129S1SvImJ_G0003236.1 mouse_genomes_project 14 32064637 32074876 + Gm20641 antisense antisense MGP_129S1SvImJ_T0009993.1 MGP_129S1SvImJ_G0008109.1 mouse_genomes_project 14 18464505 18464590 + Mir3075 miRNA miRNA MGP_129S1SvImJ_T0012988.1 MGP_129S1SvImJ_G0011077.1 mouse_genomes_project 14 11734212 11735409 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038577.1 MGP_129S1SvImJ_G0021075.1 mouse_genomes_project 14 18890068 18903223 + protein_coding processed_transcript MGP_129S1SvImJ_T0038579.1 MGP_129S1SvImJ_G0021075.1 mouse_genomes_project 14 18890785 18904626 + MGP_129S1SvImJ_P0038579 protein_coding protein_coding MGP_129S1SvImJ_T0040061.1 MGP_129S1SvImJ_G0021549.1 mouse_genomes_project 14 65320121 65430772 - MGP_129S1SvImJ_P0040061 Xpo7 protein_coding protein_coding MGP_129S1SvImJ_T0040062.1 MGP_129S1SvImJ_G0021549.1 mouse_genomes_project 14 65320121 65430772 - MGP_129S1SvImJ_P0040062 Xpo7 protein_coding protein_coding MGP_129S1SvImJ_T0012992.1 MGP_129S1SvImJ_G0011081.1 mouse_genomes_project 14 11760201 11760684 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0040434.1 MGP_129S1SvImJ_G0021678.1 mouse_genomes_project 14 121604100 121891564 + MGP_129S1SvImJ_P0040434 Itgbl1 protein_coding protein_coding MGP_129S1SvImJ_T0040435.1 MGP_129S1SvImJ_G0021678.1 mouse_genomes_project 14 121604254 121891002 + MGP_129S1SvImJ_P0040435 Itgbl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040436.1 MGP_129S1SvImJ_G0021678.1 mouse_genomes_project 14 121605553 121891564 + MGP_129S1SvImJ_P0040436 Itgbl1 protein_coding protein_coding MGP_129S1SvImJ_T0013049.1 MGP_129S1SvImJ_G0011138.1 mouse_genomes_project 14 83890580 83891564 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010042.1 MGP_129S1SvImJ_G0008158.1 mouse_genomes_project 14 115835705 115835808 + Mir6241 miRNA miRNA MGP_129S1SvImJ_T0038633.1 MGP_129S1SvImJ_G0021088.1 mouse_genomes_project 14 19992377 19994375 + MGP_129S1SvImJ_P0038633 Hesx1 protein_coding protein_coding MGP_129S1SvImJ_T0040148.1 MGP_129S1SvImJ_G0021571.1 mouse_genomes_project 14 70432015 70440820 - MGP_129S1SvImJ_P0040148 Spert protein_coding protein_coding MGP_129S1SvImJ_T0040149.1 MGP_129S1SvImJ_G0021571.1 mouse_genomes_project 14 70432015 70441951 - MGP_129S1SvImJ_P0040149 Spert protein_coding protein_coding MGP_129S1SvImJ_T0040150.1 MGP_129S1SvImJ_G0021571.1 mouse_genomes_project 14 70432015 70441951 - MGP_129S1SvImJ_P0040150 Spert protein_coding protein_coding MGP_129S1SvImJ_T0040151.1 MGP_129S1SvImJ_G0021571.1 mouse_genomes_project 14 70432015 70440820 - MGP_129S1SvImJ_P0040151 Spert protein_coding protein_coding MGP_129S1SvImJ_T0099423.1 MGP_129S1SvImJ_G0037490.1 mouse_genomes_project 14 101153100 101153207 + Gm22021 snRNA snRNA MGP_129S1SvImJ_T0039518.1 MGP_129S1SvImJ_G0021346.1 mouse_genomes_project 14 49547888 49553082 - MGP_129S1SvImJ_P0039518 Nrl protein_coding protein_coding MGP_129S1SvImJ_T0039519.1 MGP_129S1SvImJ_G0021346.1 mouse_genomes_project 14 49548438 49553872 - MGP_129S1SvImJ_P0039519 Nrl protein_coding protein_coding MGP_129S1SvImJ_T0039520.1 MGP_129S1SvImJ_G0021346.1 mouse_genomes_project 14 49548438 49553856 - MGP_129S1SvImJ_P0039520 Nrl protein_coding protein_coding MGP_129S1SvImJ_T0003578.1 MGP_129S1SvImJ_G0003251.1 mouse_genomes_project 14 49600550 49611134 - Gm15932 antisense antisense MGP_129S1SvImJ_T0000947.1 MGP_129S1SvImJ_G0000879.1 mouse_genomes_project 14 64173963 64176305 - TEC TEC MGP_129S1SvImJ_T0039798.1 MGP_129S1SvImJ_G0021445.1 mouse_genomes_project 14 56724383 56788273 + MGP_129S1SvImJ_P0039798 Rnaseh2b protein_coding protein_coding MGP_129S1SvImJ_T0039799.1 MGP_129S1SvImJ_G0021445.1 mouse_genomes_project 14 56766802 56809108 + MGP_129S1SvImJ_P0039799 Rnaseh2b protein_coding protein_coding MGP_129S1SvImJ_T0039800.1 MGP_129S1SvImJ_G0021445.1 mouse_genomes_project 14 56766859 56800216 + MGP_129S1SvImJ_P0039800 Rnaseh2b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039801.1 MGP_129S1SvImJ_G0021445.1 mouse_genomes_project 14 56782007 56790042 + Rnaseh2b protein_coding retained_intron MGP_129S1SvImJ_T0040251.1 MGP_129S1SvImJ_G0021613.1 mouse_genomes_project 14 94008187 94413537 - MGP_129S1SvImJ_P0040251 Dach1 protein_coding protein_coding MGP_129S1SvImJ_T0040252.1 MGP_129S1SvImJ_G0021613.1 mouse_genomes_project 14 94008189 94413537 - MGP_129S1SvImJ_P0040252 Dach1 protein_coding protein_coding MGP_129S1SvImJ_T0040253.1 MGP_129S1SvImJ_G0021613.1 mouse_genomes_project 14 94051541 94413665 - Dach1 protein_coding retained_intron MGP_129S1SvImJ_T0040357.1 MGP_129S1SvImJ_G0021652.1 mouse_genomes_project 14 116492220 116544416 - MGP_129S1SvImJ_P0040357 Dzip1 protein_coding protein_coding MGP_129S1SvImJ_T0040358.1 MGP_129S1SvImJ_G0021652.1 mouse_genomes_project 14 116493926 116546565 - MGP_129S1SvImJ_P0040358 Dzip1 protein_coding protein_coding MGP_129S1SvImJ_T0098495.1 MGP_129S1SvImJ_G0036580.1 mouse_genomes_project 14 57337436 57337555 + n-R5s47 rRNA rRNA MGP_129S1SvImJ_T0003571.1 MGP_129S1SvImJ_G0003245.1 mouse_genomes_project 14 48061959 48073214 - Gm43434 antisense antisense MGP_129S1SvImJ_T0099390.1 MGP_129S1SvImJ_G0037457.1 mouse_genomes_project 14 30224567 30224673 + Gm25204 snRNA snRNA MGP_129S1SvImJ_T0039281.1 MGP_129S1SvImJ_G0021288.1 mouse_genomes_project 14 46028045 46031794 + MGP_129S1SvImJ_P0039281 Tmem253 protein_coding protein_coding MGP_129S1SvImJ_T0000950.1 MGP_129S1SvImJ_G0000882.1 mouse_genomes_project 14 84969997 84970432 + TEC TEC MGP_129S1SvImJ_T0039802.1 MGP_129S1SvImJ_G0021446.1 mouse_genomes_project 14 56829797 56902916 - MGP_129S1SvImJ_P0039802 Gucy1b2 protein_coding protein_coding MGP_129S1SvImJ_T0039803.1 MGP_129S1SvImJ_G0021446.1 mouse_genomes_project 14 56829912 56902913 - MGP_129S1SvImJ_P0039803 Gucy1b2 protein_coding protein_coding MGP_129S1SvImJ_T0039804.1 MGP_129S1SvImJ_G0021446.1 mouse_genomes_project 14 56856835 56901419 - MGP_129S1SvImJ_P0039804 Gucy1b2 protein_coding protein_coding MGP_129S1SvImJ_T0100706.1 MGP_129S1SvImJ_G0038773.1 mouse_genomes_project 14 94508482 94508563 - Gm26006 snoRNA snoRNA MGP_129S1SvImJ_T0012991.1 MGP_129S1SvImJ_G0011080.1 mouse_genomes_project 14 11760199 11760611 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038968.1 MGP_129S1SvImJ_G0021183.1 mouse_genomes_project 14 30347800 30468920 - MGP_129S1SvImJ_P0038968 Ccser2 protein_coding protein_coding MGP_129S1SvImJ_T0038969.1 MGP_129S1SvImJ_G0021183.1 mouse_genomes_project 14 30347800 30468830 - MGP_129S1SvImJ_P0038969 Ccser2 protein_coding protein_coding MGP_129S1SvImJ_T0038970.1 MGP_129S1SvImJ_G0021183.1 mouse_genomes_project 14 30351704 30379132 - Ccser2 protein_coding processed_transcript MGP_129S1SvImJ_T0038971.1 MGP_129S1SvImJ_G0021183.1 mouse_genomes_project 14 30351705 30431992 - MGP_129S1SvImJ_P0038971 Ccser2 protein_coding protein_coding MGP_129S1SvImJ_T0038972.1 MGP_129S1SvImJ_G0021183.1 mouse_genomes_project 14 30351960 30381869 - MGP_129S1SvImJ_P0038972 Ccser2 protein_coding protein_coding MGP_129S1SvImJ_T0038973.1 MGP_129S1SvImJ_G0021183.1 mouse_genomes_project 14 30352007 30398654 - MGP_129S1SvImJ_P0038973 Ccser2 protein_coding protein_coding MGP_129S1SvImJ_T0038974.1 MGP_129S1SvImJ_G0021183.1 mouse_genomes_project 14 30352223 30398856 - MGP_129S1SvImJ_P0038974 Ccser2 protein_coding protein_coding MGP_129S1SvImJ_T0038975.1 MGP_129S1SvImJ_G0021183.1 mouse_genomes_project 14 30352382 30409536 - MGP_129S1SvImJ_P0038975 Ccser2 protein_coding protein_coding MGP_129S1SvImJ_T0038976.1 MGP_129S1SvImJ_G0021183.1 mouse_genomes_project 14 30352434 30359220 - Ccser2 protein_coding retained_intron MGP_129S1SvImJ_T0038977.1 MGP_129S1SvImJ_G0021183.1 mouse_genomes_project 14 30373635 30436375 - Ccser2 protein_coding processed_transcript MGP_129S1SvImJ_T0039450.1 MGP_129S1SvImJ_G0021326.1 mouse_genomes_project 14 48848551 48853049 - Ppp1r3e protein_coding processed_transcript MGP_129S1SvImJ_T0039451.1 MGP_129S1SvImJ_G0021326.1 mouse_genomes_project 14 48848563 48857345 - MGP_129S1SvImJ_P0039451 Ppp1r3e protein_coding protein_coding MGP_129S1SvImJ_T0039452.1 MGP_129S1SvImJ_G0021326.1 mouse_genomes_project 14 48855389 48856416 - Ppp1r3e protein_coding TEC MGP_129S1SvImJ_T0039453.1 MGP_129S1SvImJ_G0021326.1 mouse_genomes_project 14 48855389 48857333 - MGP_129S1SvImJ_P0039453 Ppp1r3e protein_coding protein_coding MGP_129S1SvImJ_T0038990.1 MGP_129S1SvImJ_G0021191.1 mouse_genomes_project 14 34436005 34515991 - MGP_129S1SvImJ_P0038990 Sh2d4b protein_coding protein_coding MGP_129S1SvImJ_T0002621.1 MGP_129S1SvImJ_G0002518.1 mouse_genomes_project 14 46636632 46637486 + MGP_129S1SvImJ_P0002621 Trav2 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002622.1 MGP_129S1SvImJ_G0002518.1 mouse_genomes_project 14 46636727 46637486 + MGP_129S1SvImJ_P0002622 Trav2 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002553.1 MGP_129S1SvImJ_G0002456.1 mouse_genomes_project 14 48113105 48113163 + MGP_129S1SvImJ_P0002553 Traj34 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0002646.1 MGP_129S1SvImJ_G0002538.1 mouse_genomes_project 14 46953213 47664501 + MGP_129S1SvImJ_P0002646 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0017408.1 MGP_129S1SvImJ_G0015267.1 mouse_genomes_project 14 14697881 14701341 + A430057M04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017409.1 MGP_129S1SvImJ_G0015267.1 mouse_genomes_project 14 14698753 14707286 + A430057M04Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0039470.1 MGP_129S1SvImJ_G0021334.1 mouse_genomes_project 14 48924645 48974240 - MGP_129S1SvImJ_P0039470 Myh6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0039471.1 MGP_129S1SvImJ_G0021334.1 mouse_genomes_project 14 48924645 48951824 - MGP_129S1SvImJ_P0039471 Myh6 protein_coding protein_coding MGP_129S1SvImJ_T0039472.1 MGP_129S1SvImJ_G0021334.1 mouse_genomes_project 14 48942157 48943056 - Myh6 protein_coding retained_intron MGP_129S1SvImJ_T0039473.1 MGP_129S1SvImJ_G0021334.1 mouse_genomes_project 14 48949198 48951758 - MGP_129S1SvImJ_P0039473 Myh6 protein_coding protein_coding MGP_129S1SvImJ_T0039474.1 MGP_129S1SvImJ_G0021334.1 mouse_genomes_project 14 48949198 48951788 - MGP_129S1SvImJ_P0039474 Myh6 protein_coding protein_coding MGP_129S1SvImJ_T0039475.1 MGP_129S1SvImJ_G0021334.1 mouse_genomes_project 14 48950509 48952110 - MGP_129S1SvImJ_P0039475 Myh6 protein_coding protein_coding MGP_129S1SvImJ_T0000949.1 MGP_129S1SvImJ_G0000881.1 mouse_genomes_project 14 82680039 82680412 - TEC TEC MGP_129S1SvImJ_T0002654.1 MGP_129S1SvImJ_G0002545.1 mouse_genomes_project 14 47067713 47068226 + MGP_129S1SvImJ_P0002654 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002655.1 MGP_129S1SvImJ_G0002545.1 mouse_genomes_project 14 47067955 47068219 + MGP_129S1SvImJ_P0002655 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0039826.1 MGP_129S1SvImJ_G0021457.1 mouse_genomes_project 14 57636809 57668383 - MGP_129S1SvImJ_P0039826 Fdft1 protein_coding protein_coding MGP_129S1SvImJ_T0039118.1 MGP_129S1SvImJ_G0021225.1 mouse_genomes_project 14 41940360 42089016 + MGP_129S1SvImJ_P0039118 Peli2 protein_coding protein_coding MGP_129S1SvImJ_T0039815.1 MGP_129S1SvImJ_G0021453.1 mouse_genomes_project 14 57490441 57497688 + MGP_129S1SvImJ_P0039815 Defb43 protein_coding protein_coding MGP_129S1SvImJ_T0038801.1 MGP_129S1SvImJ_G0021128.1 mouse_genomes_project 14 24539892 24616994 - MGP_129S1SvImJ_P0038801 Sh3bp5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038802.1 MGP_129S1SvImJ_G0021128.1 mouse_genomes_project 14 24553808 24598822 - MGP_129S1SvImJ_P0038802 Sh3bp5 protein_coding protein_coding MGP_129S1SvImJ_T0038803.1 MGP_129S1SvImJ_G0021128.1 mouse_genomes_project 14 24553808 24616981 - MGP_129S1SvImJ_P0038803 Sh3bp5 protein_coding protein_coding MGP_129S1SvImJ_T0038804.1 MGP_129S1SvImJ_G0021128.1 mouse_genomes_project 14 24557619 24588530 - Sh3bp5 protein_coding processed_transcript MGP_129S1SvImJ_T0038448.1 MGP_129S1SvImJ_G0021046.1 mouse_genomes_project 14 13490191 13500083 - MGP_129S1SvImJ_P0038448 Ndst2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0002528.1 MGP_129S1SvImJ_G0002435.1 mouse_genomes_project 14 48082986 48083048 + MGP_129S1SvImJ_P0002528 Traj59 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0002529.1 MGP_129S1SvImJ_G0002435.1 mouse_genomes_project 14 48082986 48083050 + Traj59 TR_J_gene processed_transcript MGP_129S1SvImJ_T0017455.1 MGP_129S1SvImJ_G0015283.1 mouse_genomes_project 14 113284157 113379471 - Gm20713 processed_transcript processed_transcript MGP_129S1SvImJ_T0039325.1 MGP_129S1SvImJ_G0021295.1 mouse_genomes_project 14 46313720 46334392 + MGP_129S1SvImJ_P0039325 Tox4 protein_coding protein_coding MGP_129S1SvImJ_T0039326.1 MGP_129S1SvImJ_G0021295.1 mouse_genomes_project 14 46314139 46330346 + Tox4 protein_coding retained_intron MGP_129S1SvImJ_T0039327.1 MGP_129S1SvImJ_G0021295.1 mouse_genomes_project 14 46314191 46314687 + Tox4 protein_coding retained_intron MGP_129S1SvImJ_T0039328.1 MGP_129S1SvImJ_G0021295.1 mouse_genomes_project 14 46314306 46323845 + Tox4 protein_coding retained_intron MGP_129S1SvImJ_T0039329.1 MGP_129S1SvImJ_G0021295.1 mouse_genomes_project 14 46322228 46323465 + Tox4 protein_coding processed_transcript MGP_129S1SvImJ_T0006684.1 MGP_129S1SvImJ_G0005529.1 mouse_genomes_project 14 19349950 19364407 + lincRNA lincRNA MGP_129S1SvImJ_T0039283.1 MGP_129S1SvImJ_G0021290.1 mouse_genomes_project 14 46089747 46134237 - MGP_129S1SvImJ_P0039283 Hnrnpc protein_coding protein_coding MGP_129S1SvImJ_T0038451.1 MGP_129S1SvImJ_G0021049.1 mouse_genomes_project 14 13731156 13834111 + MGP_129S1SvImJ_P0038451 Vcl protein_coding protein_coding MGP_129S1SvImJ_T0099411.1 MGP_129S1SvImJ_G0037478.1 mouse_genomes_project 14 77645958 77646122 - Gm22891 snRNA snRNA MGP_129S1SvImJ_T0039200.1 MGP_129S1SvImJ_G0021264.1 mouse_genomes_project 14 44880979 44884601 - MGP_129S1SvImJ_P0039200 Tmem55b protein_coding protein_coding MGP_129S1SvImJ_T0039201.1 MGP_129S1SvImJ_G0021264.1 mouse_genomes_project 14 44880984 44884623 - MGP_129S1SvImJ_P0039201 Tmem55b protein_coding protein_coding MGP_129S1SvImJ_T0039202.1 MGP_129S1SvImJ_G0021264.1 mouse_genomes_project 14 44880986 44884618 - Tmem55b protein_coding retained_intron MGP_129S1SvImJ_T0039203.1 MGP_129S1SvImJ_G0021264.1 mouse_genomes_project 14 44881635 44882979 - MGP_129S1SvImJ_P0039203 Tmem55b protein_coding protein_coding MGP_129S1SvImJ_T0039204.1 MGP_129S1SvImJ_G0021264.1 mouse_genomes_project 14 44882595 44884570 - MGP_129S1SvImJ_P0039204 Tmem55b protein_coding protein_coding MGP_129S1SvImJ_T0039205.1 MGP_129S1SvImJ_G0021264.1 mouse_genomes_project 14 44882691 44884600 - Tmem55b protein_coding retained_intron MGP_129S1SvImJ_T0039206.1 MGP_129S1SvImJ_G0021264.1 mouse_genomes_project 14 44882793 44883533 - Tmem55b protein_coding retained_intron MGP_129S1SvImJ_T0039207.1 MGP_129S1SvImJ_G0021264.1 mouse_genomes_project 14 44883027 44884605 - Tmem55b protein_coding retained_intron MGP_129S1SvImJ_T0039208.1 MGP_129S1SvImJ_G0021264.1 mouse_genomes_project 14 44883104 44884567 - Tmem55b protein_coding retained_intron MGP_129S1SvImJ_T0038687.1 MGP_129S1SvImJ_G0021107.1 mouse_genomes_project 14 23851421 23955323 + MGP_129S1SvImJ_P0038687 Sfmbt1 protein_coding protein_coding MGP_129S1SvImJ_T0038688.1 MGP_129S1SvImJ_G0021107.1 mouse_genomes_project 14 23851739 23952444 + MGP_129S1SvImJ_P0038688 Sfmbt1 protein_coding protein_coding MGP_129S1SvImJ_T0038689.1 MGP_129S1SvImJ_G0021107.1 mouse_genomes_project 14 23852187 23960073 + MGP_129S1SvImJ_P0038689 Sfmbt1 protein_coding protein_coding MGP_129S1SvImJ_T0038690.1 MGP_129S1SvImJ_G0021107.1 mouse_genomes_project 14 23853063 23955706 + MGP_129S1SvImJ_P0038690 Sfmbt1 protein_coding protein_coding MGP_129S1SvImJ_T0038691.1 MGP_129S1SvImJ_G0021107.1 mouse_genomes_project 14 23909455 23955705 + MGP_129S1SvImJ_P0038691 Sfmbt1 protein_coding protein_coding MGP_129S1SvImJ_T0038692.1 MGP_129S1SvImJ_G0021107.1 mouse_genomes_project 14 23932768 23934524 + Sfmbt1 protein_coding retained_intron MGP_129S1SvImJ_T0098493.1 MGP_129S1SvImJ_G0036578.1 mouse_genomes_project 14 22078195 22078299 - Gm23999 rRNA rRNA MGP_129S1SvImJ_T0099397.1 MGP_129S1SvImJ_G0037464.1 mouse_genomes_project 14 43453873 43454012 - Gm22116 snRNA snRNA MGP_129S1SvImJ_T0013058.1 MGP_129S1SvImJ_G0011147.1 mouse_genomes_project 14 99490300 99490773 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000948.1 MGP_129S1SvImJ_G0000880.1 mouse_genomes_project 14 66056612 66057152 - TEC TEC MGP_129S1SvImJ_T0038936.1 MGP_129S1SvImJ_G0021171.1 mouse_genomes_project 14 27664442 27701563 + MGP_129S1SvImJ_P0038936 Glud1 protein_coding protein_coding MGP_129S1SvImJ_T0038937.1 MGP_129S1SvImJ_G0021171.1 mouse_genomes_project 14 27683112 27688707 + Glud1 protein_coding retained_intron MGP_129S1SvImJ_T0038938.1 MGP_129S1SvImJ_G0021171.1 mouse_genomes_project 14 27686688 27694942 + Glud1 protein_coding processed_transcript MGP_129S1SvImJ_T0038939.1 MGP_129S1SvImJ_G0021171.1 mouse_genomes_project 14 27688749 27697956 + MGP_129S1SvImJ_P0038939 Glud1 protein_coding protein_coding MGP_129S1SvImJ_T0038940.1 MGP_129S1SvImJ_G0021171.1 mouse_genomes_project 14 27691433 27697746 + Glud1 protein_coding processed_transcript MGP_129S1SvImJ_T0040349.1 MGP_129S1SvImJ_G0021647.1 mouse_genomes_project 14 115676733 115697752 - MGP_129S1SvImJ_P0040349 Tgds protein_coding protein_coding MGP_129S1SvImJ_T0002668.1 MGP_129S1SvImJ_G0002556.1 mouse_genomes_project 14 47415683 47416193 + MGP_129S1SvImJ_P0002668 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0002669.1 MGP_129S1SvImJ_G0002556.1 mouse_genomes_project 14 47415720 47416193 + MGP_129S1SvImJ_P0002669 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0012979.1 MGP_129S1SvImJ_G0011068.1 mouse_genomes_project 14 119839 120662 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038302.1 MGP_129S1SvImJ_G0020995.1 mouse_genomes_project 14 1889697 2790488 - MGP_129S1SvImJ_P0038302 Fhit protein_coding protein_coding MGP_129S1SvImJ_T0038303.1 MGP_129S1SvImJ_G0020995.1 mouse_genomes_project 14 1889705 3514502 - MGP_129S1SvImJ_P0038303 Fhit protein_coding protein_coding MGP_129S1SvImJ_T0038304.1 MGP_129S1SvImJ_G0020995.1 mouse_genomes_project 14 1889705 3514499 - MGP_129S1SvImJ_P0038304 Fhit protein_coding protein_coding MGP_129S1SvImJ_T0038305.1 MGP_129S1SvImJ_G0020995.1 mouse_genomes_project 14 1889998 2758734 - MGP_129S1SvImJ_P0038305 Fhit protein_coding protein_coding MGP_129S1SvImJ_T0038306.1 MGP_129S1SvImJ_G0020995.1 mouse_genomes_project 14 1914781 3476192 - MGP_129S1SvImJ_P0038306 Fhit protein_coding protein_coding MGP_129S1SvImJ_T0038307.1 MGP_129S1SvImJ_G0020995.1 mouse_genomes_project 14 2111008 3475779 - Fhit protein_coding retained_intron MGP_129S1SvImJ_T0038308.1 MGP_129S1SvImJ_G0020995.1 mouse_genomes_project 14 2111115 3476163 - MGP_129S1SvImJ_P0038308 Fhit protein_coding protein_coding MGP_129S1SvImJ_T0038309.1 MGP_129S1SvImJ_G0020995.1 mouse_genomes_project 14 2219527 3514502 - MGP_129S1SvImJ_P0038309 Fhit protein_coding protein_coding MGP_129S1SvImJ_T0100699.1 MGP_129S1SvImJ_G0038766.1 mouse_genomes_project 14 86894432 86894546 - Gm23225 snoRNA snoRNA MGP_129S1SvImJ_T0039886.1 MGP_129S1SvImJ_G0021484.1 mouse_genomes_project 14 60437718 60451593 + MGP_129S1SvImJ_P0039886 Pbk protein_coding protein_coding MGP_129S1SvImJ_T0039887.1 MGP_129S1SvImJ_G0021484.1 mouse_genomes_project 14 60437818 60445871 + Pbk protein_coding processed_transcript MGP_129S1SvImJ_T0039888.1 MGP_129S1SvImJ_G0021484.1 mouse_genomes_project 14 60438113 60446637 + MGP_129S1SvImJ_P0039888 Pbk protein_coding protein_coding MGP_129S1SvImJ_T0002560.1 MGP_129S1SvImJ_G0002463.1 mouse_genomes_project 14 48120605 48120664 + MGP_129S1SvImJ_P0002560 Traj27 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0017412.1 MGP_129S1SvImJ_G0015269.1 mouse_genomes_project 14 38549502 38555593 - 4930431P03Rik processed_transcript retained_intron MGP_129S1SvImJ_T0017413.1 MGP_129S1SvImJ_G0015269.1 mouse_genomes_project 14 38550705 38555593 - 4930431P03Rik processed_transcript antisense MGP_129S1SvImJ_T0038404.1 MGP_129S1SvImJ_G0021029.1 mouse_genomes_project 14 13015090 13021470 - MGP_129S1SvImJ_P0038404 Kcnk16 protein_coding protein_coding MGP_129S1SvImJ_T0098494.1 MGP_129S1SvImJ_G0036579.1 mouse_genomes_project 14 30325912 30326028 - n-R5s46 rRNA rRNA MGP_129S1SvImJ_T0039813.1 MGP_129S1SvImJ_G0021451.1 mouse_genomes_project 14 57452969 57462814 - MGP_129S1SvImJ_P0039813 Defb48 protein_coding protein_coding MGP_129S1SvImJ_T0040132.1 MGP_129S1SvImJ_G0021566.1 mouse_genomes_project 14 69888212 69938772 - MGP_129S1SvImJ_P0040132 Lrrc63 protein_coding protein_coding MGP_129S1SvImJ_T0038783.1 MGP_129S1SvImJ_G0021122.1 mouse_genomes_project 14 24382286 24386527 + MGP_129S1SvImJ_P0038783 Tnnc1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0038784.1 MGP_129S1SvImJ_G0021122.1 mouse_genomes_project 14 24383301 24386719 + MGP_129S1SvImJ_P0038784 Tnnc1 protein_coding protein_coding MGP_129S1SvImJ_T0038785.1 MGP_129S1SvImJ_G0021122.1 mouse_genomes_project 14 24383319 24386626 + MGP_129S1SvImJ_P0038785 Tnnc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038786.1 MGP_129S1SvImJ_G0021122.1 mouse_genomes_project 14 24383321 24385970 + Tnnc1 protein_coding retained_intron MGP_129S1SvImJ_T0039092.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41434153 41531068 + MGP_129S1SvImJ_P0039092 Ktn1 protein_coding protein_coding MGP_129S1SvImJ_T0039093.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41435025 41531068 + MGP_129S1SvImJ_P0039093 Ktn1 protein_coding protein_coding MGP_129S1SvImJ_T0039094.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41435030 41451319 + MGP_129S1SvImJ_P0039094 Ktn1 protein_coding protein_coding MGP_129S1SvImJ_T0039095.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41435108 41531075 + MGP_129S1SvImJ_P0039095 Ktn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039096.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41450759 41531074 + MGP_129S1SvImJ_P0039096 Ktn1 protein_coding protein_coding MGP_129S1SvImJ_T0039097.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41450790 41530802 + MGP_129S1SvImJ_P0039097 Ktn1 protein_coding protein_coding MGP_129S1SvImJ_T0039098.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41450790 41530798 + MGP_129S1SvImJ_P0039098 Ktn1 protein_coding protein_coding MGP_129S1SvImJ_T0039099.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41450790 41530795 + MGP_129S1SvImJ_P0039099 Ktn1 protein_coding protein_coding MGP_129S1SvImJ_T0039100.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41450790 41530802 + MGP_129S1SvImJ_P0039100 Ktn1 protein_coding protein_coding MGP_129S1SvImJ_T0039101.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41450790 41530799 + MGP_129S1SvImJ_P0039101 Ktn1 protein_coding protein_coding MGP_129S1SvImJ_T0039102.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41450790 41530802 + MGP_129S1SvImJ_P0039102 Ktn1 protein_coding protein_coding MGP_129S1SvImJ_T0039103.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41450790 41530802 + MGP_129S1SvImJ_P0039103 Ktn1 protein_coding protein_coding MGP_129S1SvImJ_T0039104.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41450790 41530804 + MGP_129S1SvImJ_P0039104 Ktn1 protein_coding protein_coding MGP_129S1SvImJ_T0039105.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41450790 41530802 + MGP_129S1SvImJ_P0039105 Ktn1 protein_coding protein_coding MGP_129S1SvImJ_T0039106.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41450790 41530802 + MGP_129S1SvImJ_P0039106 Ktn1 protein_coding protein_coding MGP_129S1SvImJ_T0039107.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41450790 41530800 + MGP_129S1SvImJ_P0039107 Ktn1 protein_coding protein_coding MGP_129S1SvImJ_T0039108.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41450790 41530802 + MGP_129S1SvImJ_P0039108 Ktn1 protein_coding protein_coding MGP_129S1SvImJ_T0039109.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41450790 41530804 + MGP_129S1SvImJ_P0039109 Ktn1 protein_coding protein_coding MGP_129S1SvImJ_T0039110.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41450790 41530802 + MGP_129S1SvImJ_P0039110 Ktn1 protein_coding protein_coding MGP_129S1SvImJ_T0039111.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41450790 41530790 + MGP_129S1SvImJ_P0039111 Ktn1 protein_coding protein_coding MGP_129S1SvImJ_T0039112.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41450790 41530802 + MGP_129S1SvImJ_P0039112 Ktn1 protein_coding protein_coding MGP_129S1SvImJ_T0039113.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41490850 41494755 + Ktn1 protein_coding retained_intron MGP_129S1SvImJ_T0039114.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41495971 41510179 + Ktn1 protein_coding retained_intron MGP_129S1SvImJ_T0039115.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41509379 41519417 + Ktn1 protein_coding retained_intron MGP_129S1SvImJ_T0039116.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41519300 41520776 + Ktn1 protein_coding retained_intron MGP_129S1SvImJ_T0039117.1 MGP_129S1SvImJ_G0021224.1 mouse_genomes_project 14 41524191 41531072 + Ktn1 protein_coding retained_intron MGP_129S1SvImJ_T0100670.1 MGP_129S1SvImJ_G0038737.1 mouse_genomes_project 14 25425500 25425697 - Gm23946 snoRNA snoRNA MGP_129S1SvImJ_T0010024.1 MGP_129S1SvImJ_G0008140.1 mouse_genomes_project 14 70080104 70080207 + Gm44482 miRNA miRNA MGP_129S1SvImJ_T0039028.1 MGP_129S1SvImJ_G0021208.1 mouse_genomes_project 14 38972565 39000365 + MGP_129S1SvImJ_P0039028 Gm14698 protein_coding protein_coding MGP_129S1SvImJ_T0038890.1 MGP_129S1SvImJ_G0021152.1 mouse_genomes_project 14 26125110 26214951 + MGP_129S1SvImJ_P0038890 Vstm4 protein_coding protein_coding MGP_129S1SvImJ_T0039254.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 45995357 45998107 + MGP_129S1SvImJ_P0039254 Arhgef40 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039255.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 45995471 46015944 + MGP_129S1SvImJ_P0039255 Arhgef40 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039256.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 45995476 46016540 + MGP_129S1SvImJ_P0039256 Arhgef40 protein_coding protein_coding MGP_129S1SvImJ_T0039257.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 45995482 46001329 + Arhgef40 protein_coding retained_intron MGP_129S1SvImJ_T0039258.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 45995502 46015911 + MGP_129S1SvImJ_P0039258 Arhgef40 protein_coding protein_coding MGP_129S1SvImJ_T0039259.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 45995524 46015922 + MGP_129S1SvImJ_P0039259 Arhgef40 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039260.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 45995547 46015916 + MGP_129S1SvImJ_P0039260 Arhgef40 protein_coding protein_coding MGP_129S1SvImJ_T0039261.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 45995548 46015912 + MGP_129S1SvImJ_P0039261 Arhgef40 protein_coding protein_coding MGP_129S1SvImJ_T0039262.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 45995550 45996710 + Arhgef40 protein_coding retained_intron MGP_129S1SvImJ_T0039263.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 45995553 45999790 + MGP_129S1SvImJ_P0039263 Arhgef40 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039264.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 45995569 46015912 + MGP_129S1SvImJ_P0039264 Arhgef40 protein_coding protein_coding MGP_129S1SvImJ_T0039265.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 45995604 46002319 + Arhgef40 protein_coding retained_intron MGP_129S1SvImJ_T0039266.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 45995609 45999442 + MGP_129S1SvImJ_P0039266 Arhgef40 protein_coding protein_coding MGP_129S1SvImJ_T0039267.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 46002430 46004671 + Arhgef40 protein_coding retained_intron MGP_129S1SvImJ_T0039268.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 46004667 46007627 + MGP_129S1SvImJ_P0039268 Arhgef40 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039269.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 46005845 46006815 + Arhgef40 protein_coding retained_intron MGP_129S1SvImJ_T0039270.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 46008217 46015918 + Arhgef40 protein_coding retained_intron MGP_129S1SvImJ_T0039271.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 46012624 46015912 + MGP_129S1SvImJ_P0039271 Arhgef40 protein_coding protein_coding MGP_129S1SvImJ_T0039272.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 46012652 46014251 + Arhgef40 protein_coding retained_intron MGP_129S1SvImJ_T0039273.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 46012699 46015915 + MGP_129S1SvImJ_P0039273 Arhgef40 protein_coding protein_coding MGP_129S1SvImJ_T0039274.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 46013858 46015309 + Arhgef40 protein_coding retained_intron MGP_129S1SvImJ_T0039275.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 46014369 46015830 + MGP_129S1SvImJ_P0039275 Arhgef40 protein_coding protein_coding MGP_129S1SvImJ_T0039276.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 46014775 46015659 + Arhgef40 protein_coding retained_intron MGP_129S1SvImJ_T0039277.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 46014789 46015601 + Arhgef40 protein_coding retained_intron MGP_129S1SvImJ_T0039278.1 MGP_129S1SvImJ_G0021286.1 mouse_genomes_project 14 46014876 46015600 + Arhgef40 protein_coding retained_intron MGP_129S1SvImJ_T0099426.1 MGP_129S1SvImJ_G0037493.1 mouse_genomes_project 14 102849070 102849201 - Gm23459 snRNA snRNA MGP_129S1SvImJ_T0038425.1 MGP_129S1SvImJ_G0021037.1 mouse_genomes_project 14 13243543 13257488 - MGP_129S1SvImJ_P0038425 Mss51 protein_coding protein_coding MGP_129S1SvImJ_T0002576.1 MGP_129S1SvImJ_G0002479.1 mouse_genomes_project 14 48137688 48137746 + MGP_129S1SvImJ_P0002576 Traj9 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0040165.1 MGP_129S1SvImJ_G0021580.1 mouse_genomes_project 14 71346457 71444811 + MGP_129S1SvImJ_P0040165 Tsc22d1 protein_coding protein_coding MGP_129S1SvImJ_T0040166.1 MGP_129S1SvImJ_G0021580.1 mouse_genomes_project 14 71347075 71444811 + MGP_129S1SvImJ_P0040166 Tsc22d1 protein_coding protein_coding MGP_129S1SvImJ_T0040167.1 MGP_129S1SvImJ_G0021580.1 mouse_genomes_project 14 71347602 71348132 + Tsc22d1 protein_coding processed_transcript MGP_129S1SvImJ_T0040168.1 MGP_129S1SvImJ_G0021580.1 mouse_genomes_project 14 71349836 71374287 + MGP_129S1SvImJ_P0040168 Tsc22d1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040169.1 MGP_129S1SvImJ_G0021580.1 mouse_genomes_project 14 71350130 71371659 + MGP_129S1SvImJ_P0040169 Tsc22d1 protein_coding protein_coding MGP_129S1SvImJ_T0040170.1 MGP_129S1SvImJ_G0021580.1 mouse_genomes_project 14 71350133 71373000 + MGP_129S1SvImJ_P0040170 Tsc22d1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040171.1 MGP_129S1SvImJ_G0021580.1 mouse_genomes_project 14 71350310 71373071 + MGP_129S1SvImJ_P0040171 Tsc22d1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040172.1 MGP_129S1SvImJ_G0021580.1 mouse_genomes_project 14 71370425 71373042 + Tsc22d1 protein_coding processed_transcript MGP_129S1SvImJ_T0040173.1 MGP_129S1SvImJ_G0021580.1 mouse_genomes_project 14 71371592 71373042 + Tsc22d1 protein_coding retained_intron MGP_129S1SvImJ_T0040174.1 MGP_129S1SvImJ_G0021580.1 mouse_genomes_project 14 71412091 71443874 + MGP_129S1SvImJ_P0040174 Tsc22d1 protein_coding protein_coding MGP_129S1SvImJ_T0040175.1 MGP_129S1SvImJ_G0021580.1 mouse_genomes_project 14 71424433 71443942 + MGP_129S1SvImJ_P0040175 Tsc22d1 protein_coding protein_coding MGP_129S1SvImJ_T0040176.1 MGP_129S1SvImJ_G0021580.1 mouse_genomes_project 14 71425110 71444114 + MGP_129S1SvImJ_P0040176 Tsc22d1 protein_coding protein_coding MGP_129S1SvImJ_T0040177.1 MGP_129S1SvImJ_G0021580.1 mouse_genomes_project 14 71441153 71444812 + MGP_129S1SvImJ_P0040177 Tsc22d1 protein_coding protein_coding MGP_129S1SvImJ_T0040178.1 MGP_129S1SvImJ_G0021580.1 mouse_genomes_project 14 71441416 71444814 + MGP_129S1SvImJ_P0040178 Tsc22d1 protein_coding protein_coding MGP_129S1SvImJ_T0040179.1 MGP_129S1SvImJ_G0021580.1 mouse_genomes_project 14 71441468 71442681 + MGP_129S1SvImJ_P0040179 Tsc22d1 protein_coding protein_coding MGP_129S1SvImJ_T0040180.1 MGP_129S1SvImJ_G0021580.1 mouse_genomes_project 14 71442036 71443946 + MGP_129S1SvImJ_P0040180 Tsc22d1 protein_coding protein_coding MGP_129S1SvImJ_T0102233.1 MGP_129S1SvImJ_G0040067.1 mouse_genomes_project 14 11482446 11482594 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099428.1 MGP_129S1SvImJ_G0037495.1 mouse_genomes_project 14 107661454 107661557 + Gm26255 snRNA snRNA MGP_129S1SvImJ_T0038275.1 MGP_129S1SvImJ_G0020984.1 mouse_genomes_project 14 137976 277649 + MGP_129S1SvImJ_P0038275 Flnb protein_coding protein_coding MGP_129S1SvImJ_T0038276.1 MGP_129S1SvImJ_G0020984.1 mouse_genomes_project 14 138021 260324 + MGP_129S1SvImJ_P0038276 Flnb protein_coding unknown_likely_coding MGP_129S1SvImJ_T0098497.1 MGP_129S1SvImJ_G0036582.1 mouse_genomes_project 14 68712354 68712460 - Gm22164 rRNA rRNA MGP_129S1SvImJ_T0017449.1 MGP_129S1SvImJ_G0015280.1 mouse_genomes_project 14 101685299 101690687 - Gm17066 processed_transcript processed_transcript MGP_129S1SvImJ_T0017450.1 MGP_129S1SvImJ_G0015280.1 mouse_genomes_project 14 101685318 101690472 - Gm17066 processed_transcript processed_transcript MGP_129S1SvImJ_T0099422.1 MGP_129S1SvImJ_G0037489.1 mouse_genomes_project 14 97139043 97139144 - Gm23538 snRNA snRNA MGP_129S1SvImJ_T0002624.1 MGP_129S1SvImJ_G0002520.1 mouse_genomes_project 14 46687583 46688100 + MGP_129S1SvImJ_P0002624 Trav5-1 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0003541.1 MGP_129S1SvImJ_G0003223.1 mouse_genomes_project 14 13311415 13331269 + 1810062O18Rik antisense antisense MGP_129S1SvImJ_T0003542.1 MGP_129S1SvImJ_G0003223.1 mouse_genomes_project 14 13311450 13336807 + 1810062O18Rik antisense antisense MGP_129S1SvImJ_T0003543.1 MGP_129S1SvImJ_G0003223.1 mouse_genomes_project 14 13311593 13331237 + 1810062O18Rik antisense antisense MGP_129S1SvImJ_T0003544.1 MGP_129S1SvImJ_G0003223.1 mouse_genomes_project 14 13311629 13336947 + 1810062O18Rik antisense antisense MGP_129S1SvImJ_T0003545.1 MGP_129S1SvImJ_G0003223.1 mouse_genomes_project 14 13331274 13336954 + 1810062O18Rik antisense antisense MGP_129S1SvImJ_T0099406.1 MGP_129S1SvImJ_G0037473.1 mouse_genomes_project 14 52050467 52050614 - Gm22738 snRNA snRNA MGP_129S1SvImJ_T0039779.1 MGP_129S1SvImJ_G0021435.1 mouse_genomes_project 14 55132347 55255975 + MGP_129S1SvImJ_P0039779 Mipep protein_coding unknown_likely_coding MGP_129S1SvImJ_T0039953.1 MGP_129S1SvImJ_G0021504.1 mouse_genomes_project 14 62419139 62460883 - MGP_129S1SvImJ_P0039953 Cdca2 protein_coding protein_coding MGP_129S1SvImJ_T0039954.1 MGP_129S1SvImJ_G0021504.1 mouse_genomes_project 14 62419163 62460652 - MGP_129S1SvImJ_P0039954 Cdca2 protein_coding protein_coding MGP_129S1SvImJ_T0039955.1 MGP_129S1SvImJ_G0021504.1 mouse_genomes_project 14 62420604 62440417 - MGP_129S1SvImJ_P0039955 Cdca2 protein_coding protein_coding MGP_129S1SvImJ_T0039956.1 MGP_129S1SvImJ_G0021504.1 mouse_genomes_project 14 62423111 62460652 - MGP_129S1SvImJ_P0039956 Cdca2 protein_coding protein_coding MGP_129S1SvImJ_T0039957.1 MGP_129S1SvImJ_G0021504.1 mouse_genomes_project 14 62437755 62441664 - MGP_129S1SvImJ_P0039957 Cdca2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0039958.1 MGP_129S1SvImJ_G0021504.1 mouse_genomes_project 14 62442618 62460417 - Cdca2 protein_coding retained_intron MGP_129S1SvImJ_T0039959.1 MGP_129S1SvImJ_G0021504.1 mouse_genomes_project 14 62443954 62460723 - MGP_129S1SvImJ_P0039959 Cdca2 protein_coding protein_coding MGP_129S1SvImJ_T0002519.1 MGP_129S1SvImJ_G0002426.1 mouse_genomes_project 14 48055935 48055951 + MGP_129S1SvImJ_P0002519 Trdd2 TR_D_gene TR_D_gene MGP_129S1SvImJ_T0013032.1 MGP_129S1SvImJ_G0011121.1 mouse_genomes_project 14 51618268 51619061 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038713.1 MGP_129S1SvImJ_G0021113.1 mouse_genomes_project 14 24111471 24147850 + MGP_129S1SvImJ_P0038713 Nek4 protein_coding protein_coding MGP_129S1SvImJ_T0040322.1 MGP_129S1SvImJ_G0021636.1 mouse_genomes_project 14 101682660 101705935 - MGP_129S1SvImJ_P0040322 Rbm26 protein_coding protein_coding MGP_129S1SvImJ_T0040323.1 MGP_129S1SvImJ_G0021636.1 mouse_genomes_project 14 101690975 101753110 - MGP_129S1SvImJ_P0040323 Rbm26 protein_coding protein_coding MGP_129S1SvImJ_T0040324.1 MGP_129S1SvImJ_G0021636.1 mouse_genomes_project 14 101690996 101753573 - MGP_129S1SvImJ_P0040324 Rbm26 protein_coding protein_coding MGP_129S1SvImJ_T0040325.1 MGP_129S1SvImJ_G0021636.1 mouse_genomes_project 14 101691073 101753577 - MGP_129S1SvImJ_P0040325 Rbm26 protein_coding protein_coding MGP_129S1SvImJ_T0040326.1 MGP_129S1SvImJ_G0021636.1 mouse_genomes_project 14 101692092 101753514 - MGP_129S1SvImJ_P0040326 Rbm26 protein_coding protein_coding MGP_129S1SvImJ_T0002677.1 MGP_129S1SvImJ_G0002563.1 mouse_genomes_project 14 47588207 47588730 + MGP_129S1SvImJ_P0002677 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0038497.1 MGP_129S1SvImJ_G0021056.1 mouse_genomes_project 14 14677967 14690676 + MGP_129S1SvImJ_P0038497 Vdac2 protein_coding protein_coding MGP_129S1SvImJ_T0038498.1 MGP_129S1SvImJ_G0021056.1 mouse_genomes_project 14 14678205 14696163 + MGP_129S1SvImJ_P0038498 Vdac2 protein_coding protein_coding MGP_129S1SvImJ_T0038499.1 MGP_129S1SvImJ_G0021056.1 mouse_genomes_project 14 14678422 14686963 + MGP_129S1SvImJ_P0038499 Vdac2 protein_coding protein_coding MGP_129S1SvImJ_T0038500.1 MGP_129S1SvImJ_G0021056.1 mouse_genomes_project 14 14680308 14687157 + Vdac2 protein_coding processed_transcript MGP_129S1SvImJ_T0038501.1 MGP_129S1SvImJ_G0021056.1 mouse_genomes_project 14 14686879 14690784 + Vdac2 protein_coding retained_intron MGP_129S1SvImJ_T0038502.1 MGP_129S1SvImJ_G0021056.1 mouse_genomes_project 14 14686976 14687993 + Vdac2 protein_coding retained_intron MGP_129S1SvImJ_T0038503.1 MGP_129S1SvImJ_G0021056.1 mouse_genomes_project 14 14692511 14695802 + Vdac2 protein_coding retained_intron MGP_129S1SvImJ_T0039660.1 MGP_129S1SvImJ_G0021392.1 mouse_genomes_project 14 50451069 50474540 + MGP_129S1SvImJ_P0039660 Atp12a protein_coding protein_coding MGP_129S1SvImJ_T0006722.1 MGP_129S1SvImJ_G0005559.1 mouse_genomes_project 14 56911279 56914691 - lincRNA lincRNA MGP_129S1SvImJ_T0006723.1 MGP_129S1SvImJ_G0005559.1 mouse_genomes_project 14 56912700 56928698 - lincRNA lincRNA MGP_129S1SvImJ_T0099389.1 MGP_129S1SvImJ_G0037456.1 mouse_genomes_project 14 26958458 26958565 + Gm26228 snRNA snRNA MGP_129S1SvImJ_T0040321.1 MGP_129S1SvImJ_G0021635.1 mouse_genomes_project 14 101039070 101085399 - MGP_129S1SvImJ_P0040321 Rnf219 protein_coding protein_coding MGP_129S1SvImJ_T0038339.1 MGP_129S1SvImJ_G0021008.1 mouse_genomes_project 14 6842917 6849057 + MGP_129S1SvImJ_P0038339 Olfr31 protein_coding protein_coding MGP_129S1SvImJ_T0038340.1 MGP_129S1SvImJ_G0021008.1 mouse_genomes_project 14 6848103 6849057 + MGP_129S1SvImJ_P0038340 Olfr31 protein_coding protein_coding MGP_129S1SvImJ_T0006673.1 MGP_129S1SvImJ_G0005524.1 mouse_genomes_project 14 17570723 17571446 + 4930428N03Rik lincRNA lincRNA MGP_129S1SvImJ_T0006674.1 MGP_129S1SvImJ_G0005524.1 mouse_genomes_project 14 17570744 17579336 + 4930428N03Rik lincRNA lincRNA MGP_129S1SvImJ_T0040131.1 MGP_129S1SvImJ_G0021565.1 mouse_genomes_project 14 69814760 69853172 + MGP_129S1SvImJ_P0040131 5031414D18Rik protein_coding protein_coding MGP_129S1SvImJ_T0038635.1 MGP_129S1SvImJ_G0021090.1 mouse_genomes_project 14 20218802 20219668 + MGP_129S1SvImJ_P0038635 protein_coding protein_coding MGP_129S1SvImJ_T0100717.1 MGP_129S1SvImJ_G0038784.1 mouse_genomes_project 14 115883282 115883410 + Gm23669 snoRNA snoRNA MGP_129S1SvImJ_T0039949.1 MGP_129S1SvImJ_G0021503.1 mouse_genomes_project 14 61954847 62157812 + MGP_129S1SvImJ_P0039949 Ebf2 protein_coding protein_coding MGP_129S1SvImJ_T0039950.1 MGP_129S1SvImJ_G0021503.1 mouse_genomes_project 14 61955141 62158953 + MGP_129S1SvImJ_P0039950 Ebf2 protein_coding protein_coding MGP_129S1SvImJ_T0039951.1 MGP_129S1SvImJ_G0021503.1 mouse_genomes_project 14 61955158 61958071 + Ebf2 protein_coding retained_intron MGP_129S1SvImJ_T0039952.1 MGP_129S1SvImJ_G0021503.1 mouse_genomes_project 14 61956199 62156722 + MGP_129S1SvImJ_P0039952 Ebf2 protein_coding protein_coding MGP_129S1SvImJ_T0039907.1 MGP_129S1SvImJ_G0021492.1 mouse_genomes_project 14 60791841 60808839 + MGP_129S1SvImJ_P0039907 Chrna2 protein_coding protein_coding MGP_129S1SvImJ_T0039908.1 MGP_129S1SvImJ_G0021492.1 mouse_genomes_project 14 60797735 60810620 + MGP_129S1SvImJ_P0039908 Chrna2 protein_coding protein_coding MGP_129S1SvImJ_T0002691.1 MGP_129S1SvImJ_G0002573.1 mouse_genomes_project 14 47899525 47900050 + MGP_129S1SvImJ_P0002691 Trav23 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0039003.1 MGP_129S1SvImJ_G0021196.1 mouse_genomes_project 14 34736967 34755964 + MGP_129S1SvImJ_P0039003 Mat1a protein_coding protein_coding MGP_129S1SvImJ_T0099391.1 MGP_129S1SvImJ_G0037458.1 mouse_genomes_project 14 33618903 33619067 + Gm25012 snRNA snRNA MGP_129S1SvImJ_T0038963.1 MGP_129S1SvImJ_G0021180.1 mouse_genomes_project 14 28183245 28966683 + MGP_129S1SvImJ_P0038963 Grid1 protein_coding protein_coding MGP_129S1SvImJ_T0038964.1 MGP_129S1SvImJ_G0021180.1 mouse_genomes_project 14 28951731 28964454 + Grid1 protein_coding processed_transcript MGP_129S1SvImJ_T0040063.1 MGP_129S1SvImJ_G0021550.1 mouse_genomes_project 14 65430173 65437714 + Dok2 protein_coding processed_transcript MGP_129S1SvImJ_T0040064.1 MGP_129S1SvImJ_G0021550.1 mouse_genomes_project 14 65430186 65436281 + Dok2 protein_coding processed_transcript MGP_129S1SvImJ_T0040065.1 MGP_129S1SvImJ_G0021550.1 mouse_genomes_project 14 65437413 65440163 + Dok2 protein_coding processed_transcript MGP_129S1SvImJ_T0040066.1 MGP_129S1SvImJ_G0021550.1 mouse_genomes_project 14 65438457 65442631 + MGP_129S1SvImJ_P0040066 Dok2 protein_coding protein_coding MGP_129S1SvImJ_T0040067.1 MGP_129S1SvImJ_G0021550.1 mouse_genomes_project 14 65440029 65441005 + Dok2 protein_coding retained_intron MGP_129S1SvImJ_T0040068.1 MGP_129S1SvImJ_G0021550.1 mouse_genomes_project 14 65440328 65441688 + Dok2 protein_coding processed_transcript MGP_129S1SvImJ_T0040069.1 MGP_129S1SvImJ_G0021550.1 mouse_genomes_project 14 65440513 65441697 + Dok2 protein_coding processed_transcript MGP_129S1SvImJ_T0040070.1 MGP_129S1SvImJ_G0021550.1 mouse_genomes_project 14 65440845 65441731 + Dok2 protein_coding retained_intron MGP_129S1SvImJ_T0038830.1 MGP_129S1SvImJ_G0021135.1 mouse_genomes_project 14 25252815 25287545 + MGP_129S1SvImJ_P0038830 Galnt15 protein_coding protein_coding MGP_129S1SvImJ_T0038831.1 MGP_129S1SvImJ_G0021135.1 mouse_genomes_project 14 25253237 25285575 + MGP_129S1SvImJ_P0038831 Galnt15 protein_coding protein_coding MGP_129S1SvImJ_T0039170.1 MGP_129S1SvImJ_G0021245.1 mouse_genomes_project 14 44270170 44275930 + MGP_129S1SvImJ_P0039170 Tlr11 protein_coding protein_coding MGP_129S1SvImJ_T0039171.1 MGP_129S1SvImJ_G0021245.1 mouse_genomes_project 14 44272768 44275761 + MGP_129S1SvImJ_P0039171 Tlr11 protein_coding protein_coding MGP_129S1SvImJ_T0038508.1 MGP_129S1SvImJ_G0021059.1 mouse_genomes_project 14 14868159 15942365 + MGP_129S1SvImJ_P0038508 1700112E06Rik protein_coding protein_coding MGP_129S1SvImJ_T0038509.1 MGP_129S1SvImJ_G0021059.1 mouse_genomes_project 14 14868268 15709607 + MGP_129S1SvImJ_P0038509 1700112E06Rik protein_coding protein_coding MGP_129S1SvImJ_T0038510.1 MGP_129S1SvImJ_G0021059.1 mouse_genomes_project 14 14868295 15942365 + MGP_129S1SvImJ_P0038510 1700112E06Rik protein_coding protein_coding MGP_129S1SvImJ_T0038511.1 MGP_129S1SvImJ_G0021059.1 mouse_genomes_project 14 14868295 15593359 + MGP_129S1SvImJ_P0038511 1700112E06Rik protein_coding protein_coding MGP_129S1SvImJ_T0038512.1 MGP_129S1SvImJ_G0021059.1 mouse_genomes_project 14 15171658 15455968 + 1700112E06Rik protein_coding processed_transcript MGP_129S1SvImJ_T0038513.1 MGP_129S1SvImJ_G0021059.1 mouse_genomes_project 14 15449262 15470816 + 1700112E06Rik protein_coding processed_transcript MGP_129S1SvImJ_T0099387.1 MGP_129S1SvImJ_G0037454.1 mouse_genomes_project 14 14658352 14658497 + Gm23502 snRNA snRNA MGP_129S1SvImJ_T0013045.1 MGP_129S1SvImJ_G0011134.1 mouse_genomes_project 14 69524715 69543670 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002735.1 MGP_129S1SvImJ_G0002610.1 mouse_genomes_project 14 47090592 47091112 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0039678.1 MGP_129S1SvImJ_G0021400.1 mouse_genomes_project 14 51164399 51175950 + MGP_129S1SvImJ_P0039678 B020004C17Rik protein_coding protein_coding MGP_129S1SvImJ_T0040194.1 MGP_129S1SvImJ_G0021588.1 mouse_genomes_project 14 73116099 73124087 - MGP_129S1SvImJ_P0040194 Fam216b protein_coding protein_coding MGP_129S1SvImJ_T0040195.1 MGP_129S1SvImJ_G0021588.1 mouse_genomes_project 14 73116791 73124079 - MGP_129S1SvImJ_P0040195 Fam216b protein_coding protein_coding MGP_129S1SvImJ_T0040196.1 MGP_129S1SvImJ_G0021588.1 mouse_genomes_project 14 73117821 73124061 - MGP_129S1SvImJ_P0040196 Fam216b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0013014.1 MGP_129S1SvImJ_G0011103.1 mouse_genomes_project 14 45332994 45333161 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100707.1 MGP_129S1SvImJ_G0038774.1 mouse_genomes_project 14 96769549 96769681 + Gm26367 snoRNA snoRNA MGP_129S1SvImJ_T0038624.1 MGP_129S1SvImJ_G0021086.1 mouse_genomes_project 14 19883220 19903865 + MGP_129S1SvImJ_P0038624 Asb14 protein_coding protein_coding MGP_129S1SvImJ_T0038625.1 MGP_129S1SvImJ_G0021086.1 mouse_genomes_project 14 19883265 19903025 + MGP_129S1SvImJ_P0038625 Asb14 protein_coding protein_coding MGP_129S1SvImJ_T0038626.1 MGP_129S1SvImJ_G0021086.1 mouse_genomes_project 14 19883275 19889575 + Asb14 protein_coding processed_transcript MGP_129S1SvImJ_T0038627.1 MGP_129S1SvImJ_G0021086.1 mouse_genomes_project 14 19883283 19891775 + MGP_129S1SvImJ_P0038627 Asb14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038628.1 MGP_129S1SvImJ_G0021086.1 mouse_genomes_project 14 19891724 19903866 + MGP_129S1SvImJ_P0038628 Asb14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0002692.1 MGP_129S1SvImJ_G0002574.1 mouse_genomes_project 14 48007515 48008126 + MGP_129S1SvImJ_P0002692 Trdv4 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0102237.1 MGP_129S1SvImJ_G0040071.1 mouse_genomes_project 14 29477739 29479083 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0100675.1 MGP_129S1SvImJ_G0038742.1 mouse_genomes_project 14 30930529 30930660 - Gm23909 snoRNA snoRNA MGP_129S1SvImJ_T0040152.1 MGP_129S1SvImJ_G0021572.1 mouse_genomes_project 14 70496495 70521030 + MGP_129S1SvImJ_P0040152 Erich6b protein_coding protein_coding MGP_129S1SvImJ_T0003603.1 MGP_129S1SvImJ_G0003268.1 mouse_genomes_project 14 70011066 70013813 - Gm15629 antisense antisense MGP_129S1SvImJ_T0002737.1 MGP_129S1SvImJ_G0002612.1 mouse_genomes_project 14 47187344 47187614 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0039246.1 MGP_129S1SvImJ_G0021282.1 mouse_genomes_project 14 45914580 45917529 + Slc39a2 protein_coding retained_intron MGP_129S1SvImJ_T0039247.1 MGP_129S1SvImJ_G0021282.1 mouse_genomes_project 14 45915337 45918468 + MGP_129S1SvImJ_P0039247 Slc39a2 protein_coding protein_coding MGP_129S1SvImJ_T0039248.1 MGP_129S1SvImJ_G0021282.1 mouse_genomes_project 14 45915384 45917522 + MGP_129S1SvImJ_P0039248 Slc39a2 protein_coding protein_coding MGP_129S1SvImJ_T0038477.1 MGP_129S1SvImJ_G0021053.1 mouse_genomes_project 14 14516156 14554997 - MGP_129S1SvImJ_P0038477 Dupd1 protein_coding protein_coding MGP_129S1SvImJ_T0003572.1 MGP_129S1SvImJ_G0003246.1 mouse_genomes_project 14 48616567 48620699 + 4930579G18Rik antisense antisense MGP_129S1SvImJ_T0099416.1 MGP_129S1SvImJ_G0037483.1 mouse_genomes_project 14 92589397 92589513 + Gm24043 snRNA snRNA MGP_129S1SvImJ_T0003583.1 MGP_129S1SvImJ_G0003254.1 mouse_genomes_project 14 51697585 51701677 - Ift88os antisense antisense MGP_129S1SvImJ_T0038832.1 MGP_129S1SvImJ_G0021136.1 mouse_genomes_project 14 25307642 25312685 - MGP_129S1SvImJ_P0038832 Dph3 protein_coding protein_coding MGP_129S1SvImJ_T0038833.1 MGP_129S1SvImJ_G0021136.1 mouse_genomes_project 14 25307645 25312685 - MGP_129S1SvImJ_P0038833 Dph3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0038834.1 MGP_129S1SvImJ_G0021136.1 mouse_genomes_project 14 25307645 25312685 - MGP_129S1SvImJ_P0038834 Dph3 protein_coding protein_coding MGP_129S1SvImJ_T0038835.1 MGP_129S1SvImJ_G0021136.1 mouse_genomes_project 14 25309833 25312685 - MGP_129S1SvImJ_P0038835 Dph3 protein_coding protein_coding MGP_129S1SvImJ_T0038836.1 MGP_129S1SvImJ_G0021136.1 mouse_genomes_project 14 25309947 25312768 - Dph3 protein_coding processed_transcript MGP_129S1SvImJ_T0038837.1 MGP_129S1SvImJ_G0021136.1 mouse_genomes_project 14 25309951 25312362 - Dph3 protein_coding retained_intron MGP_129S1SvImJ_T0038838.1 MGP_129S1SvImJ_G0021136.1 mouse_genomes_project 14 25311771 25312685 - MGP_129S1SvImJ_P0038838 Dph3 protein_coding protein_coding MGP_129S1SvImJ_T0038932.1 MGP_129S1SvImJ_G0021169.1 mouse_genomes_project 14 27568124 27570896 + Syt15 protein_coding retained_intron MGP_129S1SvImJ_T0038933.1 MGP_129S1SvImJ_G0021169.1 mouse_genomes_project 14 27568575 27576349 + MGP_129S1SvImJ_P0038933 Syt15 protein_coding protein_coding MGP_129S1SvImJ_T0038934.1 MGP_129S1SvImJ_G0021169.1 mouse_genomes_project 14 27568576 27579083 + MGP_129S1SvImJ_P0038934 Syt15 protein_coding protein_coding MGP_129S1SvImJ_T0012980.1 MGP_129S1SvImJ_G0011069.1 mouse_genomes_project 14 2212515 2213116 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039858.1 MGP_129S1SvImJ_G0021471.1 mouse_genomes_project 14 58668775 58678234 + MGP_129S1SvImJ_P0039858 Prss52 protein_coding protein_coding MGP_129S1SvImJ_T0013046.1 MGP_129S1SvImJ_G0011135.1 mouse_genomes_project 14 69524716 69543669 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0038877.1 MGP_129S1SvImJ_G0021143.1 mouse_genomes_project 14 25568936 25595579 + MGP_129S1SvImJ_P0038877 Ogdhl protein_coding unknown_likely_coding MGP_129S1SvImJ_T0038878.1 MGP_129S1SvImJ_G0021143.1 mouse_genomes_project 14 25568962 25595264 + MGP_129S1SvImJ_P0038878 Ogdhl protein_coding protein_coding MGP_129S1SvImJ_T0039744.1 MGP_129S1SvImJ_G0021421.1 mouse_genomes_project 14 53569604 53630602 - MGP_129S1SvImJ_P0039744 Gm6904 protein_coding protein_coding MGP_129S1SvImJ_T0002542.1 MGP_129S1SvImJ_G0002445.1 mouse_genomes_project 14 48100733 48100796 + MGP_129S1SvImJ_P0002542 Traj46 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0000946.1 MGP_129S1SvImJ_G0000878.1 mouse_genomes_project 14 64058106 64059603 + TEC TEC MGP_129S1SvImJ_T0002598.1 MGP_129S1SvImJ_G0002499.1 mouse_genomes_project 14 48081859 48081930 + TR_J_pseudogene TR_J_pseudogene MGP_129S1SvImJ_T0039623.1 MGP_129S1SvImJ_G0021366.1 mouse_genomes_project 14 49781479 49782120 - Dhrs1 protein_coding retained_intron MGP_129S1SvImJ_T0039624.1 MGP_129S1SvImJ_G0021366.1 mouse_genomes_project 14 49781479 49788059 - Dhrs1 protein_coding retained_intron MGP_129S1SvImJ_T0039625.1 MGP_129S1SvImJ_G0021366.1 mouse_genomes_project 14 49781481 49788150 - MGP_129S1SvImJ_P0039625 Dhrs1 protein_coding protein_coding MGP_129S1SvImJ_T0039626.1 MGP_129S1SvImJ_G0021366.1 mouse_genomes_project 14 49781693 49782604 - Dhrs1 protein_coding retained_intron MGP_129S1SvImJ_T0006668.1 MGP_129S1SvImJ_G0005520.1 mouse_genomes_project 14 13452874 13469564 - 6230400D17Rik lincRNA lincRNA MGP_129S1SvImJ_T0038345.1 MGP_129S1SvImJ_G0021012.1 mouse_genomes_project 14 7374460 7585492 + MGP_129S1SvImJ_P0038345 Nek10 protein_coding protein_coding MGP_129S1SvImJ_T0038346.1 MGP_129S1SvImJ_G0021012.1 mouse_genomes_project 14 7374510 7594604 + MGP_129S1SvImJ_P0038346 Nek10 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0038347.1 MGP_129S1SvImJ_G0021012.1 mouse_genomes_project 14 7374510 7594604 + MGP_129S1SvImJ_P0038347 Nek10 protein_coding protein_coding MGP_129S1SvImJ_T0038348.1 MGP_129S1SvImJ_G0021012.1 mouse_genomes_project 14 7421072 7548694 + Nek10 protein_coding processed_transcript MGP_129S1SvImJ_T0038349.1 MGP_129S1SvImJ_G0021012.1 mouse_genomes_project 14 7425357 7551106 + Nek10 protein_coding retained_intron MGP_129S1SvImJ_T0038350.1 MGP_129S1SvImJ_G0021012.1 mouse_genomes_project 14 7507710 7594654 + MGP_129S1SvImJ_P0038350 Nek10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0100661.1 MGP_129S1SvImJ_G0038728.1 mouse_genomes_project 14 3702543 3702675 + Gm25466 snoRNA snoRNA MGP_129S1SvImJ_T0002684.1 MGP_129S1SvImJ_G0002568.1 mouse_genomes_project 14 47768052 47768646 + MGP_129S1SvImJ_P0002684 Trav19 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0000954.1 MGP_129S1SvImJ_G0000886.1 mouse_genomes_project 14 112268304 112268568 - TEC TEC MGP_129S1SvImJ_T0006685.1 MGP_129S1SvImJ_G0005530.1 mouse_genomes_project 14 21546576 21549891 - Gm2670 lincRNA lincRNA MGP_129S1SvImJ_T0039444.1 MGP_129S1SvImJ_G0021323.1 mouse_genomes_project 14 48681113 48682922 - MGP_129S1SvImJ_P0039444 Cebpe protein_coding protein_coding MGP_129S1SvImJ_T0039166.1 MGP_129S1SvImJ_G0021243.1 mouse_genomes_project 14 44222509 44223542 - MGP_129S1SvImJ_P0039166 Olfr734 protein_coding protein_coding MGP_129S1SvImJ_T0038341.1 MGP_129S1SvImJ_G0021009.1 mouse_genomes_project 14 6866372 6875384 + MGP_129S1SvImJ_P0038341 Il3ra protein_coding protein_coding MGP_129S1SvImJ_T0039978.1 MGP_129S1SvImJ_G0021516.1 mouse_genomes_project 14 64010320 64058869 - MGP_129S1SvImJ_P0039978 Slc25a37 protein_coding protein_coding MGP_129S1SvImJ_T0039979.1 MGP_129S1SvImJ_G0021516.1 mouse_genomes_project 14 64010323 64058869 - Slc25a37 protein_coding retained_intron MGP_129S1SvImJ_T0039980.1 MGP_129S1SvImJ_G0021516.1 mouse_genomes_project 14 64012644 64058724 - MGP_129S1SvImJ_P0039980 Slc25a37 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0013024.1 MGP_129S1SvImJ_G0011113.1 mouse_genomes_project 14 48798747 48799177 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099424.1 MGP_129S1SvImJ_G0037491.1 mouse_genomes_project 14 101829451 101829558 + Gm22290 snRNA snRNA MGP_129S1SvImJ_T0040400.1 MGP_129S1SvImJ_G0021670.1 mouse_genomes_project 14 120346762 120365827 - MGP_129S1SvImJ_P0040400 Gm5089 protein_coding protein_coding MGP_129S1SvImJ_T0013057.1 MGP_129S1SvImJ_G0011146.1 mouse_genomes_project 14 96571609 96571914 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0039948.1 MGP_129S1SvImJ_G0021502.1 mouse_genomes_project 14 61725967 61789534 - MGP_129S1SvImJ_P0039948 Ppp2r2a protein_coding protein_coding MGP_129S1SvImJ_T0002671.1 MGP_129S1SvImJ_G0002558.1 mouse_genomes_project 14 47435112 47435643 + MGP_129S1SvImJ_P0002671 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0040201.1 MGP_129S1SvImJ_G0021592.1 mouse_genomes_project 14 73963669 74311464 + MGP_129S1SvImJ_P0040201 Vwa8 protein_coding protein_coding MGP_129S1SvImJ_T0039850.1 MGP_129S1SvImJ_G0021467.1 mouse_genomes_project 14 58524697 58541330 - MGP_129S1SvImJ_P0039850 4930578I06Rik protein_coding protein_coding MGP_129S1SvImJ_T0039713.1 MGP_129S1SvImJ_G0021411.1 mouse_genomes_project 14 52016486 52023287 + MGP_129S1SvImJ_P0039713 Sap18 protein_coding protein_coding MGP_129S1SvImJ_T0039714.1 MGP_129S1SvImJ_G0021411.1 mouse_genomes_project 14 52016522 52020385 + MGP_129S1SvImJ_P0039714 Sap18 protein_coding protein_coding MGP_129S1SvImJ_T0039715.1 MGP_129S1SvImJ_G0021411.1 mouse_genomes_project 14 52016524 52023276 + MGP_129S1SvImJ_P0039715 Sap18 protein_coding protein_coding MGP_129S1SvImJ_T0039716.1 MGP_129S1SvImJ_G0021411.1 mouse_genomes_project 14 52016570 52017156 + Sap18 protein_coding retained_intron MGP_129S1SvImJ_T0013038.1 MGP_129S1SvImJ_G0011127.1 mouse_genomes_project 14 57949766 57950764 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0002551.1 MGP_129S1SvImJ_G0002454.1 mouse_genomes_project 14 48109918 48109978 + MGP_129S1SvImJ_P0002551 Traj37 TR_J_gene TR_J_gene MGP_129S1SvImJ_T0040129.1 MGP_129S1SvImJ_G0021564.1 mouse_genomes_project 14 69548562 69743110 - MGP_129S1SvImJ_P0040129 Lrch1 protein_coding protein_coding MGP_129S1SvImJ_T0040130.1 MGP_129S1SvImJ_G0021564.1 mouse_genomes_project 14 69558924 69742893 - MGP_129S1SvImJ_P0040130 Lrch1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0039644.1 MGP_129S1SvImJ_G0021376.1 mouse_genomes_project 14 49943210 49956376 + MGP_129S1SvImJ_P0039644 Khnyn protein_coding protein_coding MGP_129S1SvImJ_T0000941.1 MGP_129S1SvImJ_G0000873.1 mouse_genomes_project 14 56081396 56083540 + TEC TEC MGP_129S1SvImJ_T0038584.1 MGP_129S1SvImJ_G0021077.1 mouse_genomes_project 14 18928351 18933081 + Duxbl2 protein_coding processed_transcript MGP_129S1SvImJ_T0038589.1 MGP_129S1SvImJ_G0021077.1 mouse_genomes_project 14 18930147 18937103 + Duxbl2 protein_coding processed_transcript MGP_129S1SvImJ_T0038591.1 MGP_129S1SvImJ_G0021077.1 mouse_genomes_project 14 18932578 18939733 + MGP_129S1SvImJ_P0038591 Duxbl2 protein_coding protein_coding MGP_129S1SvImJ_T0039365.1 MGP_129S1SvImJ_G0021303.1 mouse_genomes_project 14 48165269 48188750 - MGP_129S1SvImJ_P0039365 Dad1 protein_coding protein_coding MGP_129S1SvImJ_T0039366.1 MGP_129S1SvImJ_G0021303.1 mouse_genomes_project 14 48169774 48188560 - MGP_129S1SvImJ_P0039366 Dad1 protein_coding protein_coding MGP_129S1SvImJ_T0099405.1 MGP_129S1SvImJ_G0037472.1 mouse_genomes_project 14 50988786 50988845 - Gm22218 snRNA snRNA MGP_129S1SvImJ_T0038610.1 MGP_129S1SvImJ_G0021081.1 mouse_genomes_project 14 19489236 19489593 + MGP_129S1SvImJ_P0038610 Gm2178 protein_coding protein_coding MGP_129S1SvImJ_T0039667.1 MGP_129S1SvImJ_G0021396.1 mouse_genomes_project 14 50762867 50793047 + MGP_129S1SvImJ_P0039667 Mphosph8 protein_coding protein_coding MGP_129S1SvImJ_T0039668.1 MGP_129S1SvImJ_G0021396.1 mouse_genomes_project 14 50767848 50769594 + Mphosph8 protein_coding processed_transcript MGP_129S1SvImJ_T0039669.1 MGP_129S1SvImJ_G0021396.1 mouse_genomes_project 14 50783997 50786866 + Mphosph8 protein_coding processed_transcript MGP_129S1SvImJ_T0039670.1 MGP_129S1SvImJ_G0021396.1 mouse_genomes_project 14 50788754 50793044 + Mphosph8 protein_coding processed_transcript MGP_129S1SvImJ_T0039671.1 MGP_129S1SvImJ_G0021396.1 mouse_genomes_project 14 50789040 50793045 + Mphosph8 protein_coding processed_transcript MGP_129S1SvImJ_T0039615.1 MGP_129S1SvImJ_G0021362.1 mouse_genomes_project 14 49713941 49721644 + MGP_129S1SvImJ_P0039615 Gmpr2 protein_coding protein_coding MGP_129S1SvImJ_T0039227.1 MGP_129S1SvImJ_G0021279.1 mouse_genomes_project 14 45749687 45771015 - MGP_129S1SvImJ_P0039227 Ang4 protein_coding protein_coding MGP_129S1SvImJ_T0039860.1 MGP_129S1SvImJ_G0021473.1 mouse_genomes_project 14 59223244 59384972 + MGP_129S1SvImJ_P0039860 Kif13b protein_coding protein_coding MGP_129S1SvImJ_T0039861.1 MGP_129S1SvImJ_G0021473.1 mouse_genomes_project 14 59223315 59388296 + MGP_129S1SvImJ_P0039861 Kif13b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0002685.1 MGP_129S1SvImJ_G0002569.1 mouse_genomes_project 14 47806572 47807343 + MGP_129S1SvImJ_P0002685 Trav21-dv12 TR_V_gene TR_V_gene MGP_129S1SvImJ_T0038851.1 MGP_129S1SvImJ_G0021138.1 mouse_genomes_project 14 25374769 25391336 + MGP_129S1SvImJ_P0038851 Msmb protein_coding protein_coding MGP_129S1SvImJ_T0038852.1 MGP_129S1SvImJ_G0021138.1 mouse_genomes_project 14 25380367 25391336 + MGP_129S1SvImJ_P0038852 Msmb protein_coding protein_coding MGP_129S1SvImJ_T0011388.1 MGP_129S1SvImJ_G0009504.1 mouse_genomes_project 14 25036175 25036473 - Gm22876 misc_RNA misc_RNA MGP_129S1SvImJ_T0039743.1 MGP_129S1SvImJ_G0021420.1 mouse_genomes_project 14 53567931 53587911 - MGP_129S1SvImJ_P0039743 Phf11b protein_coding protein_coding MGP_129S1SvImJ_T0002740.1 MGP_129S1SvImJ_G0002615.1 mouse_genomes_project 14 47330169 47330660 + TR_V_pseudogene TR_V_pseudogene MGP_129S1SvImJ_T0039665.1 MGP_129S1SvImJ_G0021395.1 mouse_genomes_project 14 50666893 50753457 + MGP_129S1SvImJ_P0039665 Parp4 protein_coding protein_coding MGP_129S1SvImJ_T0039666.1 MGP_129S1SvImJ_G0021395.1 mouse_genomes_project 14 50749030 50753488 + Parp4 protein_coding retained_intron MGP_129S1SvImJ_T0100682.1 MGP_129S1SvImJ_G0038749.1 mouse_genomes_project 14 51506580 51506700 - Gm23593 snoRNA snoRNA MGP_129S1SvImJ_T0038439.1 MGP_129S1SvImJ_G0021040.1 mouse_genomes_project 14 13414752 13422238 - MGP_129S1SvImJ_P0038439 Myoz1 protein_coding protein_coding MGP_129S1SvImJ_T0100751.1 MGP_129S1SvImJ_G0038818.1 mouse_genomes_project 15 69035858 69035990 - Gm24232 snoRNA snoRNA MGP_129S1SvImJ_T0040520.1 MGP_129S1SvImJ_G0021700.1 mouse_genomes_project 15 4139990 4205720 + MGP_129S1SvImJ_P0040520 Lifr protein_coding protein_coding MGP_129S1SvImJ_T0040521.1 MGP_129S1SvImJ_G0021700.1 mouse_genomes_project 15 4140003 4199312 + MGP_129S1SvImJ_P0040521 Lifr protein_coding protein_coding MGP_129S1SvImJ_T0040522.1 MGP_129S1SvImJ_G0021700.1 mouse_genomes_project 15 4167549 4211455 + MGP_129S1SvImJ_P0040522 Lifr protein_coding protein_coding MGP_129S1SvImJ_T0040744.1 MGP_129S1SvImJ_G0021774.1 mouse_genomes_project 15 31985113 31989127 - MGP_129S1SvImJ_P0040744 Tspyl5 protein_coding protein_coding MGP_129S1SvImJ_T0102266.1 MGP_129S1SvImJ_G0040100.1 mouse_genomes_project 15 100224833 100225071 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099487.1 MGP_129S1SvImJ_G0037554.1 mouse_genomes_project 15 104642525 104642624 + Gm24128 snRNA snRNA MGP_129S1SvImJ_T0041613.1 MGP_129S1SvImJ_G0022050.1 mouse_genomes_project 15 78879218 78928745 - MGP_129S1SvImJ_P0041613 Elfn2 protein_coding protein_coding MGP_129S1SvImJ_T0003621.1 MGP_129S1SvImJ_G0003281.1 mouse_genomes_project 15 35812685 35813979 + Gm28221 antisense antisense MGP_129S1SvImJ_T0042067.1 MGP_129S1SvImJ_G0022180.1 mouse_genomes_project 15 85493741 85518951 + MGP_129S1SvImJ_P0042067 Prr5 protein_coding protein_coding MGP_129S1SvImJ_T0013116.1 MGP_129S1SvImJ_G0011205.1 mouse_genomes_project 15 82124674 82125298 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098506.1 MGP_129S1SvImJ_G0036591.1 mouse_genomes_project 15 28810413 28810532 + Gm23956 rRNA rRNA MGP_129S1SvImJ_T0042153.1 MGP_129S1SvImJ_G0022212.1 mouse_genomes_project 15 90121333 90148076 - MGP_129S1SvImJ_P0042153 Mlc1 protein_coding protein_coding MGP_129S1SvImJ_T0042154.1 MGP_129S1SvImJ_G0022212.1 mouse_genomes_project 15 90121333 90148076 - MGP_129S1SvImJ_P0042154 Mlc1 protein_coding protein_coding MGP_129S1SvImJ_T0042696.1 MGP_129S1SvImJ_G0022373.1 mouse_genomes_project 15 103515920 103522319 + MGP_129S1SvImJ_P0042696 Krt88 protein_coding protein_coding MGP_129S1SvImJ_T0000961.1 MGP_129S1SvImJ_G0000893.1 mouse_genomes_project 15 18925919 18926338 + TEC TEC MGP_129S1SvImJ_T0042845.1 MGP_129S1SvImJ_G0022432.1 mouse_genomes_project 15 105254222 105273818 + MGP_129S1SvImJ_P0042845 Hoxc4 protein_coding protein_coding MGP_129S1SvImJ_T0042846.1 MGP_129S1SvImJ_G0022432.1 mouse_genomes_project 15 105271807 105274265 + MGP_129S1SvImJ_P0042846 Hoxc4 protein_coding protein_coding MGP_129S1SvImJ_T0040986.1 MGP_129S1SvImJ_G0021861.1 mouse_genomes_project 15 56831063 56988681 + MGP_129S1SvImJ_P0040986 Zhx2 protein_coding protein_coding MGP_129S1SvImJ_T0040987.1 MGP_129S1SvImJ_G0021861.1 mouse_genomes_project 15 56834556 56970301 + Zhx2 protein_coding processed_transcript MGP_129S1SvImJ_T0042306.1 MGP_129S1SvImJ_G0022250.1 mouse_genomes_project 15 93176282 93204292 + MGP_129S1SvImJ_P0042306 protein_coding protein_coding MGP_129S1SvImJ_T0042307.1 MGP_129S1SvImJ_G0022250.1 mouse_genomes_project 15 93176343 93204665 + MGP_129S1SvImJ_P0042307 protein_coding protein_coding MGP_129S1SvImJ_T0042308.1 MGP_129S1SvImJ_G0022250.1 mouse_genomes_project 15 93176345 93204661 + MGP_129S1SvImJ_P0042308 protein_coding protein_coding MGP_129S1SvImJ_T0042309.1 MGP_129S1SvImJ_G0022250.1 mouse_genomes_project 15 93176346 93204663 + MGP_129S1SvImJ_P0042309 protein_coding protein_coding MGP_129S1SvImJ_T0042310.1 MGP_129S1SvImJ_G0022250.1 mouse_genomes_project 15 93176354 93199844 + protein_coding processed_transcript MGP_129S1SvImJ_T0042311.1 MGP_129S1SvImJ_G0022250.1 mouse_genomes_project 15 93187828 93204665 + MGP_129S1SvImJ_P0042311 protein_coding protein_coding MGP_129S1SvImJ_T0042108.1 MGP_129S1SvImJ_G0022196.1 mouse_genomes_project 15 86724862 86731926 - MGP_129S1SvImJ_P0042108 Pkdrej protein_coding protein_coding MGP_129S1SvImJ_T0042537.1 MGP_129S1SvImJ_G0022330.1 mouse_genomes_project 15 101235401 101252511 + MGP_129S1SvImJ_P0042537 Tmbim6 protein_coding protein_coding MGP_129S1SvImJ_T0042538.1 MGP_129S1SvImJ_G0022330.1 mouse_genomes_project 15 101235505 101251096 + MGP_129S1SvImJ_P0042538 Tmbim6 protein_coding protein_coding MGP_129S1SvImJ_T0042539.1 MGP_129S1SvImJ_G0022330.1 mouse_genomes_project 15 101235505 101250998 + MGP_129S1SvImJ_P0042539 Tmbim6 protein_coding protein_coding MGP_129S1SvImJ_T0042540.1 MGP_129S1SvImJ_G0022330.1 mouse_genomes_project 15 101235541 101250953 + MGP_129S1SvImJ_P0042540 Tmbim6 protein_coding protein_coding MGP_129S1SvImJ_T0042541.1 MGP_129S1SvImJ_G0022330.1 mouse_genomes_project 15 101235738 101250997 + MGP_129S1SvImJ_P0042541 Tmbim6 protein_coding protein_coding MGP_129S1SvImJ_T0042542.1 MGP_129S1SvImJ_G0022330.1 mouse_genomes_project 15 101236111 101249139 + MGP_129S1SvImJ_P0042542 Tmbim6 protein_coding protein_coding MGP_129S1SvImJ_T0042543.1 MGP_129S1SvImJ_G0022330.1 mouse_genomes_project 15 101236129 101251072 + MGP_129S1SvImJ_P0042543 Tmbim6 protein_coding protein_coding MGP_129S1SvImJ_T0042544.1 MGP_129S1SvImJ_G0022330.1 mouse_genomes_project 15 101243548 101244566 + MGP_129S1SvImJ_P0042544 Tmbim6 protein_coding protein_coding MGP_129S1SvImJ_T0042545.1 MGP_129S1SvImJ_G0022330.1 mouse_genomes_project 15 101248335 101251253 + Tmbim6 protein_coding retained_intron MGP_129S1SvImJ_T0041543.1 MGP_129S1SvImJ_G0022022.1 mouse_genomes_project 15 77554703 77564026 - MGP_129S1SvImJ_P0041543 protein_coding protein_coding MGP_129S1SvImJ_T0042724.1 MGP_129S1SvImJ_G0022399.1 mouse_genomes_project 15 104256754 104287347 - Spryd3 protein_coding retained_intron MGP_129S1SvImJ_T0042725.1 MGP_129S1SvImJ_G0022399.1 mouse_genomes_project 15 104256754 104287389 - MGP_129S1SvImJ_P0042725 Spryd3 protein_coding protein_coding MGP_129S1SvImJ_T0042726.1 MGP_129S1SvImJ_G0022399.1 mouse_genomes_project 15 104258395 104280060 - Spryd3 protein_coding processed_transcript MGP_129S1SvImJ_T0042727.1 MGP_129S1SvImJ_G0022399.1 mouse_genomes_project 15 104281387 104282078 - Spryd3 protein_coding retained_intron MGP_129S1SvImJ_T0041305.1 MGP_129S1SvImJ_G0021964.1 mouse_genomes_project 15 75957591 75963912 + MGP_129S1SvImJ_P0041305 Tigd5 protein_coding protein_coding MGP_129S1SvImJ_T0013071.1 MGP_129S1SvImJ_G0011160.1 mouse_genomes_project 15 5617612 5617912 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0042010.1 MGP_129S1SvImJ_G0022162.1 mouse_genomes_project 15 83991637 84046518 - MGP_129S1SvImJ_P0042010 Arfgap3 protein_coding protein_coding MGP_129S1SvImJ_T0042011.1 MGP_129S1SvImJ_G0022162.1 mouse_genomes_project 15 83992582 84046479 - MGP_129S1SvImJ_P0042011 Arfgap3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042571.1 MGP_129S1SvImJ_G0022339.1 mouse_genomes_project 15 101573527 101573814 - MGP_129S1SvImJ_P0042571 Gm17349 protein_coding protein_coding MGP_129S1SvImJ_T0042482.1 MGP_129S1SvImJ_G0022309.1 mouse_genomes_project 15 100490805 100518902 - MGP_129S1SvImJ_P0042482 Arf3 protein_coding protein_coding MGP_129S1SvImJ_T0042483.1 MGP_129S1SvImJ_G0022309.1 mouse_genomes_project 15 100494199 100518905 - Arf3 protein_coding processed_transcript MGP_129S1SvImJ_T0042484.1 MGP_129S1SvImJ_G0022309.1 mouse_genomes_project 15 100495735 100518683 - MGP_129S1SvImJ_P0042484 Arf3 protein_coding protein_coding MGP_129S1SvImJ_T0010106.1 MGP_129S1SvImJ_G0008222.1 mouse_genomes_project 15 97985824 97985916 + Gm25397 miRNA miRNA MGP_129S1SvImJ_T0100724.1 MGP_129S1SvImJ_G0038791.1 mouse_genomes_project 15 17861392 17861522 + Gm25976 snoRNA snoRNA MGP_129S1SvImJ_T0100733.1 MGP_129S1SvImJ_G0038800.1 mouse_genomes_project 15 30543514 30543585 - Snord123 snoRNA snoRNA MGP_129S1SvImJ_T0041906.1 MGP_129S1SvImJ_G0022126.1 mouse_genomes_project 15 82411344 82425453 + MGP_129S1SvImJ_P0041906 Csdc2 protein_coding protein_coding MGP_129S1SvImJ_T0041907.1 MGP_129S1SvImJ_G0022126.1 mouse_genomes_project 15 82411567 82421381 + MGP_129S1SvImJ_P0041907 Csdc2 protein_coding protein_coding MGP_129S1SvImJ_T0041908.1 MGP_129S1SvImJ_G0022126.1 mouse_genomes_project 15 82420242 82421399 + Csdc2 protein_coding processed_transcript MGP_129S1SvImJ_T0041909.1 MGP_129S1SvImJ_G0022126.1 mouse_genomes_project 15 82421472 82425446 + Csdc2 protein_coding retained_intron MGP_129S1SvImJ_T0010066.1 MGP_129S1SvImJ_G0008182.1 mouse_genomes_project 15 71459741 71459846 + miRNA miRNA MGP_129S1SvImJ_T0040565.1 MGP_129S1SvImJ_G0021712.1 mouse_genomes_project 15 6223689 6290789 + MGP_129S1SvImJ_P0040565 Lmbrd2 protein_coding protein_coding MGP_129S1SvImJ_T0010076.1 MGP_129S1SvImJ_G0008192.1 mouse_genomes_project 15 79639351 79639424 - Mir1943 miRNA miRNA MGP_129S1SvImJ_T0042471.1 MGP_129S1SvImJ_G0022305.1 mouse_genomes_project 15 100393017 100410627 - MGP_129S1SvImJ_P0042471 Ddx23 protein_coding protein_coding MGP_129S1SvImJ_T0042472.1 MGP_129S1SvImJ_G0022305.1 mouse_genomes_project 15 100395868 100410622 - Ddx23 protein_coding retained_intron MGP_129S1SvImJ_T0042473.1 MGP_129S1SvImJ_G0022305.1 mouse_genomes_project 15 100395880 100410619 - Ddx23 protein_coding retained_intron MGP_129S1SvImJ_T0042474.1 MGP_129S1SvImJ_G0022305.1 mouse_genomes_project 15 100399961 100410622 - Ddx23 protein_coding retained_intron MGP_129S1SvImJ_T0042475.1 MGP_129S1SvImJ_G0022305.1 mouse_genomes_project 15 100404421 100410596 - MGP_129S1SvImJ_P0042475 Ddx23 protein_coding protein_coding MGP_129S1SvImJ_T0042476.1 MGP_129S1SvImJ_G0022305.1 mouse_genomes_project 15 100405635 100410627 - Ddx23 protein_coding retained_intron MGP_129S1SvImJ_T0042787.1 MGP_129S1SvImJ_G0022416.1 mouse_genomes_project 15 104687378 104706642 - MGP_129S1SvImJ_P0042787 Map3k12 protein_coding protein_coding MGP_129S1SvImJ_T0042788.1 MGP_129S1SvImJ_G0022416.1 mouse_genomes_project 15 104688505 104700424 - MGP_129S1SvImJ_P0042788 Map3k12 protein_coding protein_coding MGP_129S1SvImJ_T0042789.1 MGP_129S1SvImJ_G0022416.1 mouse_genomes_project 15 104688754 104706870 - MGP_129S1SvImJ_P0042789 Map3k12 protein_coding protein_coding MGP_129S1SvImJ_T0042791.1 MGP_129S1SvImJ_G0022416.1 mouse_genomes_project 15 104695099 104706810 - MGP_129S1SvImJ_P0042791 Map3k12 protein_coding protein_coding MGP_129S1SvImJ_T0042792.1 MGP_129S1SvImJ_G0022416.1 mouse_genomes_project 15 104695161 104706781 - MGP_129S1SvImJ_P0042792 Map3k12 protein_coding protein_coding MGP_129S1SvImJ_T0042793.1 MGP_129S1SvImJ_G0022416.1 mouse_genomes_project 15 104695198 104706622 - MGP_129S1SvImJ_P0042793 Map3k12 protein_coding protein_coding MGP_129S1SvImJ_T0042794.1 MGP_129S1SvImJ_G0022416.1 mouse_genomes_project 15 104695847 104706618 - Map3k12 protein_coding processed_transcript MGP_129S1SvImJ_T0042795.1 MGP_129S1SvImJ_G0022416.1 mouse_genomes_project 15 104698835 104700516 - Map3k12 protein_coding processed_transcript MGP_129S1SvImJ_T0042408.1 MGP_129S1SvImJ_G0022282.1 mouse_genomes_project 15 99650602 99656544 + MGP_129S1SvImJ_P0042408 Tmem106c protein_coding unknown_likely_coding MGP_129S1SvImJ_T0041201.1 MGP_129S1SvImJ_G0021928.1 mouse_genomes_project 15 74385491 74417378 - MGP_129S1SvImJ_P0041201 Mroh4 protein_coding protein_coding MGP_129S1SvImJ_T0041202.1 MGP_129S1SvImJ_G0021928.1 mouse_genomes_project 15 74385491 74415892 - MGP_129S1SvImJ_P0041202 Mroh4 protein_coding protein_coding MGP_129S1SvImJ_T0041203.1 MGP_129S1SvImJ_G0021928.1 mouse_genomes_project 15 74385854 74391478 - MGP_129S1SvImJ_P0041203 Mroh4 protein_coding protein_coding MGP_129S1SvImJ_T0041204.1 MGP_129S1SvImJ_G0021928.1 mouse_genomes_project 15 74385866 74387683 - Mroh4 protein_coding retained_intron MGP_129S1SvImJ_T0041205.1 MGP_129S1SvImJ_G0021928.1 mouse_genomes_project 15 74395597 74409439 - MGP_129S1SvImJ_P0041205 Mroh4 protein_coding protein_coding MGP_129S1SvImJ_T0041206.1 MGP_129S1SvImJ_G0021928.1 mouse_genomes_project 15 74412675 74417323 - Mroh4 protein_coding processed_transcript MGP_129S1SvImJ_T0000972.1 MGP_129S1SvImJ_G0000904.1 mouse_genomes_project 15 105651921 105652258 + TEC TEC MGP_129S1SvImJ_T0040439.1 MGP_129S1SvImJ_G0021680.1 mouse_genomes_project 15 113118 123213 + MGP_129S1SvImJ_P0040439 protein_coding protein_coding MGP_129S1SvImJ_T0040440.1 MGP_129S1SvImJ_G0021680.1 mouse_genomes_project 15 116267 128004 + MGP_129S1SvImJ_P0040440 protein_coding protein_coding MGP_129S1SvImJ_T0040441.1 MGP_129S1SvImJ_G0021680.1 mouse_genomes_project 15 116311 123166 + MGP_129S1SvImJ_P0040441 protein_coding protein_coding MGP_129S1SvImJ_T0040442.1 MGP_129S1SvImJ_G0021680.1 mouse_genomes_project 15 116421 128003 + MGP_129S1SvImJ_P0040442 protein_coding protein_coding MGP_129S1SvImJ_T0040443.1 MGP_129S1SvImJ_G0021680.1 mouse_genomes_project 15 116498 123095 + MGP_129S1SvImJ_P0040443 protein_coding protein_coding MGP_129S1SvImJ_T0040444.1 MGP_129S1SvImJ_G0021680.1 mouse_genomes_project 15 116499 122553 + protein_coding retained_intron MGP_129S1SvImJ_T0040445.1 MGP_129S1SvImJ_G0021680.1 mouse_genomes_project 15 119515 124702 + MGP_129S1SvImJ_P0040445 protein_coding protein_coding MGP_129S1SvImJ_T0006827.1 MGP_129S1SvImJ_G0005631.1 mouse_genomes_project 15 105334749 105340709 - Gm28876 lincRNA lincRNA MGP_129S1SvImJ_T0010063.1 MGP_129S1SvImJ_G0008179.1 mouse_genomes_project 15 62032403 62032473 - Gm24810 miRNA miRNA MGP_129S1SvImJ_T0010045.1 MGP_129S1SvImJ_G0008161.1 mouse_genomes_project 15 9394070 9394153 + Mir1898 miRNA miRNA MGP_129S1SvImJ_T0000963.1 MGP_129S1SvImJ_G0000895.1 mouse_genomes_project 15 61314237 61319067 - TEC TEC MGP_129S1SvImJ_T0042620.1 MGP_129S1SvImJ_G0022355.1 mouse_genomes_project 15 102546453 102570224 - MGP_129S1SvImJ_P0042620 Pou6f1 protein_coding protein_coding MGP_129S1SvImJ_T0042621.1 MGP_129S1SvImJ_G0022355.1 mouse_genomes_project 15 102546453 102558875 - MGP_129S1SvImJ_P0042621 Pou6f1 protein_coding protein_coding MGP_129S1SvImJ_T0042622.1 MGP_129S1SvImJ_G0022355.1 mouse_genomes_project 15 102546455 102579127 - MGP_129S1SvImJ_P0042622 Pou6f1 protein_coding protein_coding MGP_129S1SvImJ_T0042623.1 MGP_129S1SvImJ_G0022355.1 mouse_genomes_project 15 102546455 102568130 - MGP_129S1SvImJ_P0042623 Pou6f1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042624.1 MGP_129S1SvImJ_G0022355.1 mouse_genomes_project 15 102546458 102553203 - Pou6f1 protein_coding retained_intron MGP_129S1SvImJ_T0042625.1 MGP_129S1SvImJ_G0022355.1 mouse_genomes_project 15 102549377 102571265 - MGP_129S1SvImJ_P0042625 Pou6f1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042626.1 MGP_129S1SvImJ_G0022355.1 mouse_genomes_project 15 102549377 102571265 - MGP_129S1SvImJ_P0042626 Pou6f1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042627.1 MGP_129S1SvImJ_G0022355.1 mouse_genomes_project 15 102558800 102568233 - Pou6f1 protein_coding retained_intron MGP_129S1SvImJ_T0042628.1 MGP_129S1SvImJ_G0022355.1 mouse_genomes_project 15 102559125 102577820 - Pou6f1 protein_coding processed_transcript MGP_129S1SvImJ_T0040623.1 MGP_129S1SvImJ_G0021728.1 mouse_genomes_project 15 8171599 8200032 + MGP_129S1SvImJ_P0040623 Slc45a2 protein_coding protein_coding MGP_129S1SvImJ_T0040620.1 MGP_129S1SvImJ_G0021726.1 mouse_genomes_project 15 8105805 8134193 + MGP_129S1SvImJ_P0040620 C1qtnf3 protein_coding protein_coding MGP_129S1SvImJ_T0040621.1 MGP_129S1SvImJ_G0021726.1 mouse_genomes_project 15 8105830 8133749 + MGP_129S1SvImJ_P0040621 C1qtnf3 protein_coding protein_coding MGP_129S1SvImJ_T0013104.1 MGP_129S1SvImJ_G0011193.1 mouse_genomes_project 15 64519370 64519682 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006807.1 MGP_129S1SvImJ_G0005617.1 mouse_genomes_project 15 92906839 92915174 + 4933438A12Rik lincRNA lincRNA MGP_129S1SvImJ_T0040575.1 MGP_129S1SvImJ_G0021716.1 mouse_genomes_project 15 6597354 6622733 - MGP_129S1SvImJ_P0040575 Il7r protein_coding protein_coding MGP_129S1SvImJ_T0040466.1 MGP_129S1SvImJ_G0021686.1 mouse_genomes_project 15 1252951 1396826 + MGP_129S1SvImJ_P0040466 Plcxd3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040467.1 MGP_129S1SvImJ_G0021686.1 mouse_genomes_project 15 1252964 1460326 + MGP_129S1SvImJ_P0040467 Plcxd3 protein_coding protein_coding MGP_129S1SvImJ_T0042238.1 MGP_129S1SvImJ_G0022232.1 mouse_genomes_project 15 90579342 90581383 + MGP_129S1SvImJ_P0042238 Klhdc7b protein_coding protein_coding MGP_129S1SvImJ_T0041001.1 MGP_129S1SvImJ_G0021866.1 mouse_genomes_project 15 57183118 57235687 - MGP_129S1SvImJ_P0041001 Gm29394 protein_coding protein_coding MGP_129S1SvImJ_T0041004.1 MGP_129S1SvImJ_G0021866.1 mouse_genomes_project 15 57185834 57235469 - MGP_129S1SvImJ_P0041004 Gm29394 protein_coding protein_coding MGP_129S1SvImJ_T0041008.1 MGP_129S1SvImJ_G0021866.1 mouse_genomes_project 15 57205313 57235445 - MGP_129S1SvImJ_P0041008 Gm29394 protein_coding protein_coding MGP_129S1SvImJ_T0041009.1 MGP_129S1SvImJ_G0021866.1 mouse_genomes_project 15 57205432 57235468 - MGP_129S1SvImJ_P0041009 Gm29394 protein_coding protein_coding MGP_129S1SvImJ_T0042749.1 MGP_129S1SvImJ_G0022406.1 mouse_genomes_project 15 104445951 104448240 + MGP_129S1SvImJ_P0042749 Mfsd5 protein_coding protein_coding MGP_129S1SvImJ_T0013084.1 MGP_129S1SvImJ_G0011173.1 mouse_genomes_project 15 34504052 34504978 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100763.1 MGP_129S1SvImJ_G0038830.1 mouse_genomes_project 15 100257444 100257581 - Snora2b snoRNA snoRNA MGP_129S1SvImJ_T0042720.1 MGP_129S1SvImJ_G0022396.1 mouse_genomes_project 15 104165249 104170971 + MGP_129S1SvImJ_P0042720 Krt18 protein_coding protein_coding MGP_129S1SvImJ_T0042517.1 MGP_129S1SvImJ_G0022328.1 mouse_genomes_project 15 101132890 101143753 + MGP_129S1SvImJ_P0042517 Prpf40b protein_coding protein_coding MGP_129S1SvImJ_T0042518.1 MGP_129S1SvImJ_G0022328.1 mouse_genomes_project 15 101133042 101154806 + Prpf40b protein_coding retained_intron MGP_129S1SvImJ_T0042519.1 MGP_129S1SvImJ_G0022328.1 mouse_genomes_project 15 101133044 101153902 + Prpf40b protein_coding retained_intron MGP_129S1SvImJ_T0042520.1 MGP_129S1SvImJ_G0022328.1 mouse_genomes_project 15 101133044 101153902 + Prpf40b protein_coding retained_intron MGP_129S1SvImJ_T0042521.1 MGP_129S1SvImJ_G0022328.1 mouse_genomes_project 15 101133047 101144865 + MGP_129S1SvImJ_P0042521 Prpf40b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042522.1 MGP_129S1SvImJ_G0022328.1 mouse_genomes_project 15 101133074 101154806 + MGP_129S1SvImJ_P0042522 Prpf40b protein_coding protein_coding MGP_129S1SvImJ_T0042523.1 MGP_129S1SvImJ_G0022328.1 mouse_genomes_project 15 101133698 101154798 + MGP_129S1SvImJ_P0042523 Prpf40b protein_coding protein_coding MGP_129S1SvImJ_T0042524.1 MGP_129S1SvImJ_G0022328.1 mouse_genomes_project 15 101141086 101154287 + MGP_129S1SvImJ_P0042524 Prpf40b protein_coding protein_coding MGP_129S1SvImJ_T0042525.1 MGP_129S1SvImJ_G0022328.1 mouse_genomes_project 15 101141087 101154795 + MGP_129S1SvImJ_P0042525 Prpf40b protein_coding protein_coding MGP_129S1SvImJ_T0042526.1 MGP_129S1SvImJ_G0022328.1 mouse_genomes_project 15 101145672 101152881 + Prpf40b protein_coding retained_intron MGP_129S1SvImJ_T0042527.1 MGP_129S1SvImJ_G0022328.1 mouse_genomes_project 15 101147690 101153678 + Prpf40b protein_coding retained_intron MGP_129S1SvImJ_T0042528.1 MGP_129S1SvImJ_G0022328.1 mouse_genomes_project 15 101152655 101153582 + Prpf40b protein_coding retained_intron MGP_129S1SvImJ_T0042529.1 MGP_129S1SvImJ_G0022328.1 mouse_genomes_project 15 101152664 101154459 + MGP_129S1SvImJ_P0042529 Prpf40b protein_coding protein_coding MGP_129S1SvImJ_T0042530.1 MGP_129S1SvImJ_G0022328.1 mouse_genomes_project 15 101152693 101154601 + MGP_129S1SvImJ_P0042530 Prpf40b protein_coding protein_coding MGP_129S1SvImJ_T0042531.1 MGP_129S1SvImJ_G0022328.1 mouse_genomes_project 15 101153327 101154798 + MGP_129S1SvImJ_P0042531 Prpf40b protein_coding protein_coding MGP_129S1SvImJ_T0040658.1 MGP_129S1SvImJ_G0021739.1 mouse_genomes_project 15 10056838 10073366 - MGP_129S1SvImJ_P0040658 6030458C11Rik protein_coding protein_coding MGP_129S1SvImJ_T0041057.1 MGP_129S1SvImJ_G0021893.1 mouse_genomes_project 15 63305484 63330713 - MGP_129S1SvImJ_P0041057 Gsdmc3 protein_coding protein_coding MGP_129S1SvImJ_T0041058.1 MGP_129S1SvImJ_G0021893.1 mouse_genomes_project 15 63305484 63332088 - MGP_129S1SvImJ_P0041058 Gsdmc3 protein_coding protein_coding MGP_129S1SvImJ_T0041062.1 MGP_129S1SvImJ_G0021893.1 mouse_genomes_project 15 63305912 63321155 - MGP_129S1SvImJ_P0041062 Gsdmc3 protein_coding protein_coding MGP_129S1SvImJ_T0041037.1 MGP_129S1SvImJ_G0021884.1 mouse_genomes_project 15 58594540 58770482 + MGP_129S1SvImJ_P0041037 Nsmce2 protein_coding protein_coding MGP_129S1SvImJ_T0041038.1 MGP_129S1SvImJ_G0021884.1 mouse_genomes_project 15 58594540 58837341 + MGP_129S1SvImJ_P0041038 Nsmce2 protein_coding protein_coding MGP_129S1SvImJ_T0100758.1 MGP_129S1SvImJ_G0038825.1 mouse_genomes_project 15 85111559 85111703 - Gm22890 snoRNA snoRNA MGP_129S1SvImJ_T0041309.1 MGP_129S1SvImJ_G0021968.1 mouse_genomes_project 15 76021417 76028127 + Zfp707 protein_coding retained_intron MGP_129S1SvImJ_T0041310.1 MGP_129S1SvImJ_G0021968.1 mouse_genomes_project 15 76021556 76028015 + MGP_129S1SvImJ_P0041310 Zfp707 protein_coding protein_coding MGP_129S1SvImJ_T0041311.1 MGP_129S1SvImJ_G0021968.1 mouse_genomes_project 15 76021566 76028003 + MGP_129S1SvImJ_P0041311 Zfp707 protein_coding protein_coding MGP_129S1SvImJ_T0041312.1 MGP_129S1SvImJ_G0021968.1 mouse_genomes_project 15 76021935 76027024 + MGP_129S1SvImJ_P0041312 Zfp707 protein_coding protein_coding MGP_129S1SvImJ_T0041313.1 MGP_129S1SvImJ_G0021968.1 mouse_genomes_project 15 76025041 76026209 + Zfp707 protein_coding retained_intron MGP_129S1SvImJ_T0011420.1 MGP_129S1SvImJ_G0009536.1 mouse_genomes_project 15 105181032 105181101 + Gm27337 misc_RNA misc_RNA MGP_129S1SvImJ_T0041610.1 MGP_129S1SvImJ_G0022047.1 mouse_genomes_project 15 78736375 78743708 - MGP_129S1SvImJ_P0041610 Sstr3 protein_coding protein_coding MGP_129S1SvImJ_T0040948.1 MGP_129S1SvImJ_G0021850.1 mouse_genomes_project 15 53896726 53981415 - MGP_129S1SvImJ_P0040948 Enpp2 protein_coding protein_coding MGP_129S1SvImJ_T0040949.1 MGP_129S1SvImJ_G0021850.1 mouse_genomes_project 15 53896729 53981271 - MGP_129S1SvImJ_P0040949 Enpp2 protein_coding protein_coding MGP_129S1SvImJ_T0040950.1 MGP_129S1SvImJ_G0021850.1 mouse_genomes_project 15 53897098 53981287 - MGP_129S1SvImJ_P0040950 Enpp2 protein_coding protein_coding MGP_129S1SvImJ_T0040951.1 MGP_129S1SvImJ_G0021850.1 mouse_genomes_project 15 53897189 53981230 - MGP_129S1SvImJ_P0040951 Enpp2 protein_coding protein_coding MGP_129S1SvImJ_T0003623.1 MGP_129S1SvImJ_G0003283.1 mouse_genomes_project 15 54519127 54522033 - 1700040F17Rik antisense antisense MGP_129S1SvImJ_T0040778.1 MGP_129S1SvImJ_G0021785.1 mouse_genomes_project 15 33223364 33517031 - MGP_129S1SvImJ_P0040778 Stk3 protein_coding protein_coding MGP_129S1SvImJ_T0040779.1 MGP_129S1SvImJ_G0021785.1 mouse_genomes_project 15 33223551 33516975 - MGP_129S1SvImJ_P0040779 Stk3 protein_coding protein_coding MGP_129S1SvImJ_T0040780.1 MGP_129S1SvImJ_G0021785.1 mouse_genomes_project 15 33307644 33347113 - Stk3 protein_coding retained_intron MGP_129S1SvImJ_T0040781.1 MGP_129S1SvImJ_G0021785.1 mouse_genomes_project 15 33434683 33516894 - MGP_129S1SvImJ_P0040781 Stk3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0099452.1 MGP_129S1SvImJ_G0037519.1 mouse_genomes_project 15 48384850 48384956 + Gm23848 snRNA snRNA MGP_129S1SvImJ_T0041124.1 MGP_129S1SvImJ_G0021909.1 mouse_genomes_project 15 66414760 66446627 + MGP_129S1SvImJ_P0041124 Wisp1 protein_coding protein_coding MGP_129S1SvImJ_T0041125.1 MGP_129S1SvImJ_G0021909.1 mouse_genomes_project 15 66414827 66443503 + MGP_129S1SvImJ_P0041125 Wisp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041126.1 MGP_129S1SvImJ_G0021909.1 mouse_genomes_project 15 66414948 66442881 + MGP_129S1SvImJ_P0041126 Wisp1 protein_coding protein_coding MGP_129S1SvImJ_T0041127.1 MGP_129S1SvImJ_G0021909.1 mouse_genomes_project 15 66432751 66442661 + Wisp1 protein_coding processed_transcript MGP_129S1SvImJ_T0041015.1 MGP_129S1SvImJ_G0021870.1 mouse_genomes_project 15 57338070 57377056 - MGP_129S1SvImJ_P0041015 Fbxo32 protein_coding protein_coding MGP_129S1SvImJ_T0010069.1 MGP_129S1SvImJ_G0008185.1 mouse_genomes_project 15 76278216 76278279 - Mir1942 miRNA miRNA MGP_129S1SvImJ_T0100722.1 MGP_129S1SvImJ_G0038789.1 mouse_genomes_project 15 8542561 8542688 - Gm24844 snoRNA snoRNA MGP_129S1SvImJ_T0041942.1 MGP_129S1SvImJ_G0022136.1 mouse_genomes_project 15 82702909 82710046 - MGP_129S1SvImJ_P0041942 Shisa8 protein_coding protein_coding MGP_129S1SvImJ_T0040572.1 MGP_129S1SvImJ_G0021714.1 mouse_genomes_project 15 6429337 6469368 + MGP_129S1SvImJ_P0040572 Ugt3a2 protein_coding protein_coding MGP_129S1SvImJ_T0040573.1 MGP_129S1SvImJ_G0021714.1 mouse_genomes_project 15 6429376 6459938 + Ugt3a2 protein_coding retained_intron MGP_129S1SvImJ_T0042133.1 MGP_129S1SvImJ_G0022204.1 mouse_genomes_project 15 88683833 88827328 + MGP_129S1SvImJ_P0042133 Fam19a5 protein_coding protein_coding MGP_129S1SvImJ_T0003665.1 MGP_129S1SvImJ_G0003317.1 mouse_genomes_project 15 103165161 103169027 - antisense antisense MGP_129S1SvImJ_T0041366.1 MGP_129S1SvImJ_G0021979.1 mouse_genomes_project 15 76310391 76313489 + MGP_129S1SvImJ_P0041366 Grina protein_coding protein_coding MGP_129S1SvImJ_T0102007.1 MGP_129S1SvImJ_G0039864.1 mouse_genomes_project 15 75664847 75671048 + unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0102008.1 MGP_129S1SvImJ_G0039864.1 mouse_genomes_project 15 75665193 75668061 + unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0102009.1 MGP_129S1SvImJ_G0039864.1 mouse_genomes_project 15 75665202 75677262 + unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0102010.1 MGP_129S1SvImJ_G0039864.1 mouse_genomes_project 15 75666204 75670578 + unitary_pseudogene unitary_pseudogene MGP_129S1SvImJ_T0102011.1 MGP_129S1SvImJ_G0039864.1 mouse_genomes_project 15 75668080 75670343 + unitary_pseudogene retained_intron MGP_129S1SvImJ_T0102012.1 MGP_129S1SvImJ_G0039864.1 mouse_genomes_project 15 75668244 75670096 + unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0042322.1 MGP_129S1SvImJ_G0022255.1 mouse_genomes_project 15 94798828 94811020 - MGP_129S1SvImJ_P0042322 Zcrb1 protein_coding protein_coding MGP_129S1SvImJ_T0042323.1 MGP_129S1SvImJ_G0022255.1 mouse_genomes_project 15 94798837 94811053 - MGP_129S1SvImJ_P0042323 Zcrb1 protein_coding protein_coding MGP_129S1SvImJ_T0042324.1 MGP_129S1SvImJ_G0022255.1 mouse_genomes_project 15 94798841 94803913 - Zcrb1 protein_coding retained_intron MGP_129S1SvImJ_T0042325.1 MGP_129S1SvImJ_G0022255.1 mouse_genomes_project 15 94798844 94804110 - Zcrb1 protein_coding retained_intron MGP_129S1SvImJ_T0042326.1 MGP_129S1SvImJ_G0022255.1 mouse_genomes_project 15 94800348 94800876 - Zcrb1 protein_coding retained_intron MGP_129S1SvImJ_T0042327.1 MGP_129S1SvImJ_G0022255.1 mouse_genomes_project 15 94800480 94804400 - Zcrb1 protein_coding retained_intron MGP_129S1SvImJ_T0042328.1 MGP_129S1SvImJ_G0022255.1 mouse_genomes_project 15 94800532 94811053 - MGP_129S1SvImJ_P0042328 Zcrb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042329.1 MGP_129S1SvImJ_G0022255.1 mouse_genomes_project 15 94806798 94810992 - Zcrb1 protein_coding retained_intron MGP_129S1SvImJ_T0017498.1 MGP_129S1SvImJ_G0015302.1 mouse_genomes_project 15 77592072 77602890 + processed_transcript antisense MGP_129S1SvImJ_T0017499.1 MGP_129S1SvImJ_G0015302.1 mouse_genomes_project 15 77592105 77593909 + processed_transcript retained_intron MGP_129S1SvImJ_T0040622.1 MGP_129S1SvImJ_G0021727.1 mouse_genomes_project 15 8135795 8166064 + MGP_129S1SvImJ_P0040622 Amacr protein_coding protein_coding MGP_129S1SvImJ_T0041442.1 MGP_129S1SvImJ_G0021995.1 mouse_genomes_project 15 76580002 76589946 - MGP_129S1SvImJ_P0041442 Dgat1 protein_coding protein_coding MGP_129S1SvImJ_T0041443.1 MGP_129S1SvImJ_G0021995.1 mouse_genomes_project 15 76580004 76581168 - Dgat1 protein_coding retained_intron MGP_129S1SvImJ_T0041444.1 MGP_129S1SvImJ_G0021995.1 mouse_genomes_project 15 76580055 76581302 - Dgat1 protein_coding retained_intron MGP_129S1SvImJ_T0041445.1 MGP_129S1SvImJ_G0021995.1 mouse_genomes_project 15 76580511 76581933 - MGP_129S1SvImJ_P0041445 Dgat1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041446.1 MGP_129S1SvImJ_G0021995.1 mouse_genomes_project 15 76581263 76584593 - MGP_129S1SvImJ_P0041446 Dgat1 protein_coding protein_coding MGP_129S1SvImJ_T0041447.1 MGP_129S1SvImJ_G0021995.1 mouse_genomes_project 15 76581578 76582310 - Dgat1 protein_coding retained_intron MGP_129S1SvImJ_T0041448.1 MGP_129S1SvImJ_G0021995.1 mouse_genomes_project 15 76581889 76583183 - Dgat1 protein_coding retained_intron MGP_129S1SvImJ_T0041449.1 MGP_129S1SvImJ_G0021995.1 mouse_genomes_project 15 76581939 76582651 - Dgat1 protein_coding retained_intron MGP_129S1SvImJ_T0013075.1 MGP_129S1SvImJ_G0011164.1 mouse_genomes_project 15 7705953 7706953 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010059.1 MGP_129S1SvImJ_G0008175.1 mouse_genomes_project 15 38637397 38637468 - Gm25958 miRNA miRNA MGP_129S1SvImJ_T0099465.1 MGP_129S1SvImJ_G0037532.1 mouse_genomes_project 15 73487506 73487633 + Gm22106 snRNA snRNA MGP_129S1SvImJ_T0100765.1 MGP_129S1SvImJ_G0038832.1 mouse_genomes_project 15 101074792 101074925 - Gm25999 snoRNA snoRNA MGP_129S1SvImJ_T0040699.1 MGP_129S1SvImJ_G0021751.1 mouse_genomes_project 15 23851476 23989931 + MGP_129S1SvImJ_P0040699 Fam134b protein_coding protein_coding MGP_129S1SvImJ_T0040700.1 MGP_129S1SvImJ_G0021751.1 mouse_genomes_project 15 23955024 23988584 + MGP_129S1SvImJ_P0040700 Fam134b protein_coding protein_coding MGP_129S1SvImJ_T0042234.1 MGP_129S1SvImJ_G0022229.1 mouse_genomes_project 15 90562926 90565114 - MGP_129S1SvImJ_P0042234 Sco2 protein_coding protein_coding MGP_129S1SvImJ_T0099483.1 MGP_129S1SvImJ_G0037550.1 mouse_genomes_project 15 101208153 101208260 - Gm22951 snRNA snRNA MGP_129S1SvImJ_T0100738.1 MGP_129S1SvImJ_G0038805.1 mouse_genomes_project 15 37456548 37456679 + Gm24789 snoRNA snoRNA MGP_129S1SvImJ_T0041818.1 MGP_129S1SvImJ_G0022105.1 mouse_genomes_project 15 81370004 81407926 + MGP_129S1SvImJ_P0041818 Sgsm3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041819.1 MGP_129S1SvImJ_G0022105.1 mouse_genomes_project 15 81370024 81413701 + Sgsm3 protein_coding processed_transcript MGP_129S1SvImJ_T0041820.1 MGP_129S1SvImJ_G0022105.1 mouse_genomes_project 15 81370032 81413148 + MGP_129S1SvImJ_P0041820 Sgsm3 protein_coding protein_coding MGP_129S1SvImJ_T0041821.1 MGP_129S1SvImJ_G0022105.1 mouse_genomes_project 15 81370045 81404471 + Sgsm3 protein_coding processed_transcript MGP_129S1SvImJ_T0041822.1 MGP_129S1SvImJ_G0022105.1 mouse_genomes_project 15 81370045 81407908 + MGP_129S1SvImJ_P0041822 Sgsm3 protein_coding protein_coding MGP_129S1SvImJ_T0041823.1 MGP_129S1SvImJ_G0022105.1 mouse_genomes_project 15 81370062 81404471 + Sgsm3 protein_coding processed_transcript MGP_129S1SvImJ_T0041825.1 MGP_129S1SvImJ_G0022105.1 mouse_genomes_project 15 81409348 81411362 + Sgsm3 protein_coding retained_intron MGP_129S1SvImJ_T0041826.1 MGP_129S1SvImJ_G0022105.1 mouse_genomes_project 15 81409769 81411948 + MGP_129S1SvImJ_P0041826 Sgsm3 protein_coding protein_coding MGP_129S1SvImJ_T0041827.1 MGP_129S1SvImJ_G0022105.1 mouse_genomes_project 15 81410660 81411711 + Sgsm3 protein_coding retained_intron MGP_129S1SvImJ_T0041828.1 MGP_129S1SvImJ_G0022105.1 mouse_genomes_project 15 81411269 81413301 + Sgsm3 protein_coding retained_intron MGP_129S1SvImJ_T0041829.1 MGP_129S1SvImJ_G0022105.1 mouse_genomes_project 15 81412046 81413168 + Sgsm3 protein_coding retained_intron MGP_129S1SvImJ_T0041830.1 MGP_129S1SvImJ_G0022105.1 mouse_genomes_project 15 81412136 81413153 + Sgsm3 protein_coding retained_intron MGP_129S1SvImJ_T0041831.1 MGP_129S1SvImJ_G0022105.1 mouse_genomes_project 15 81412288 81413047 + Sgsm3 protein_coding retained_intron MGP_129S1SvImJ_T0041217.1 MGP_129S1SvImJ_G0021936.1 mouse_genomes_project 15 74531317 74537613 - MGP_129S1SvImJ_P0041217 Lynx1 protein_coding protein_coding MGP_129S1SvImJ_T0041218.1 MGP_129S1SvImJ_G0021936.1 mouse_genomes_project 15 74535059 74537581 - MGP_129S1SvImJ_P0041218 Lynx1 protein_coding protein_coding MGP_129S1SvImJ_T0041219.1 MGP_129S1SvImJ_G0021936.1 mouse_genomes_project 15 74536897 74537591 - Lynx1 protein_coding retained_intron MGP_129S1SvImJ_T0042334.1 MGP_129S1SvImJ_G0022257.1 mouse_genomes_project 15 94923985 95032933 - MGP_129S1SvImJ_P0042334 Prickle1 protein_coding protein_coding MGP_129S1SvImJ_T0042335.1 MGP_129S1SvImJ_G0022257.1 mouse_genomes_project 15 94923985 94946477 - MGP_129S1SvImJ_P0042335 Prickle1 protein_coding protein_coding MGP_129S1SvImJ_T0100754.1 MGP_129S1SvImJ_G0038821.1 mouse_genomes_project 15 73069616 73069739 + Gm24787 snoRNA snoRNA MGP_129S1SvImJ_T0040935.1 MGP_129S1SvImJ_G0021843.1 mouse_genomes_project 15 52058042 52354528 - MGP_129S1SvImJ_P0040935 Ext1 protein_coding protein_coding MGP_129S1SvImJ_T0040936.1 MGP_129S1SvImJ_G0021843.1 mouse_genomes_project 15 52062669 52354028 - MGP_129S1SvImJ_P0040936 Ext1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040937.1 MGP_129S1SvImJ_G0021843.1 mouse_genomes_project 15 52076931 52193610 - MGP_129S1SvImJ_P0040937 Ext1 protein_coding protein_coding MGP_129S1SvImJ_T0040938.1 MGP_129S1SvImJ_G0021843.1 mouse_genomes_project 15 52083565 52101607 - Ext1 protein_coding retained_intron MGP_129S1SvImJ_T0000960.1 MGP_129S1SvImJ_G0000892.1 mouse_genomes_project 15 17917537 17919523 - TEC TEC MGP_129S1SvImJ_T0010116.1 MGP_129S1SvImJ_G0008232.1 mouse_genomes_project 15 104880150 104880225 - Mir688 miRNA miRNA MGP_129S1SvImJ_T0042731.1 MGP_129S1SvImJ_G0022402.1 mouse_genomes_project 15 104330516 104358197 - MGP_129S1SvImJ_P0042731 Csad protein_coding protein_coding MGP_129S1SvImJ_T0042832.1 MGP_129S1SvImJ_G0022424.1 mouse_genomes_project 15 105155370 105163078 + MGP_129S1SvImJ_P0042832 Hoxc13 protein_coding protein_coding MGP_129S1SvImJ_T0041508.1 MGP_129S1SvImJ_G0022011.1 mouse_genomes_project 15 76817793 76824685 - MGP_129S1SvImJ_P0041508 Lrrc24 protein_coding protein_coding MGP_129S1SvImJ_T0041509.1 MGP_129S1SvImJ_G0022011.1 mouse_genomes_project 15 76818724 76820934 - Lrrc24 protein_coding retained_intron MGP_129S1SvImJ_T0041510.1 MGP_129S1SvImJ_G0022011.1 mouse_genomes_project 15 76822139 76824671 - Lrrc24 protein_coding retained_intron MGP_129S1SvImJ_T0041511.1 MGP_129S1SvImJ_G0022011.1 mouse_genomes_project 15 76823977 76826357 - MGP_129S1SvImJ_P0041511 Lrrc24 protein_coding protein_coding MGP_129S1SvImJ_T0041420.1 MGP_129S1SvImJ_G0021990.1 mouse_genomes_project 15 76442474 76445455 - MGP_129S1SvImJ_P0041420 Tssk5 protein_coding protein_coding MGP_129S1SvImJ_T0006829.1 MGP_129S1SvImJ_G0005633.1 mouse_genomes_project 15 105364348 105388668 - D930007P13Rik lincRNA lincRNA MGP_129S1SvImJ_T0042372.1 MGP_129S1SvImJ_G0022275.1 mouse_genomes_project 15 98891540 99038743 + MGP_129S1SvImJ_P0042372 Pced1b protein_coding protein_coding MGP_129S1SvImJ_T0003636.1 MGP_129S1SvImJ_G0003295.1 mouse_genomes_project 15 79423195 79473556 + Gm10863 antisense antisense MGP_129S1SvImJ_T0003637.1 MGP_129S1SvImJ_G0003295.1 mouse_genomes_project 15 79423212 79473341 + Gm10863 antisense antisense MGP_129S1SvImJ_T0003638.1 MGP_129S1SvImJ_G0003295.1 mouse_genomes_project 15 79423220 79484641 + Gm10863 antisense antisense MGP_129S1SvImJ_T0003639.1 MGP_129S1SvImJ_G0003295.1 mouse_genomes_project 15 79423220 79473670 + Gm10863 antisense antisense MGP_129S1SvImJ_T0003640.1 MGP_129S1SvImJ_G0003295.1 mouse_genomes_project 15 79466437 79474556 + Gm10863 antisense antisense MGP_129S1SvImJ_T0100725.1 MGP_129S1SvImJ_G0038792.1 mouse_genomes_project 15 18638569 18638697 + Gm25711 snoRNA snoRNA MGP_129S1SvImJ_T0042155.1 MGP_129S1SvImJ_G0022213.1 mouse_genomes_project 15 90151976 90165548 + Mov10l1 protein_coding retained_intron MGP_129S1SvImJ_T0042156.1 MGP_129S1SvImJ_G0022213.1 mouse_genomes_project 15 90151976 90217754 + MGP_129S1SvImJ_P0042156 Mov10l1 protein_coding protein_coding MGP_129S1SvImJ_T0042157.1 MGP_129S1SvImJ_G0022213.1 mouse_genomes_project 15 90152061 90217758 + MGP_129S1SvImJ_P0042157 Mov10l1 protein_coding protein_coding MGP_129S1SvImJ_T0042158.1 MGP_129S1SvImJ_G0022213.1 mouse_genomes_project 15 90190671 90193872 + Mov10l1 protein_coding processed_transcript MGP_129S1SvImJ_T0042159.1 MGP_129S1SvImJ_G0022213.1 mouse_genomes_project 15 90193863 90217754 + MGP_129S1SvImJ_P0042159 Mov10l1 protein_coding protein_coding MGP_129S1SvImJ_T0042706.1 MGP_129S1SvImJ_G0022383.1 mouse_genomes_project 15 103831134 103839234 - MGP_129S1SvImJ_P0042706 Krt5 protein_coding protein_coding MGP_129S1SvImJ_T0010100.1 MGP_129S1SvImJ_G0008216.1 mouse_genomes_project 15 86604256 86604341 + Mirlet7b miRNA miRNA MGP_129S1SvImJ_T0042221.1 MGP_129S1SvImJ_G0022228.1 mouse_genomes_project 15 90547009 90564114 + MGP_129S1SvImJ_P0042221 Ncaph2 protein_coding protein_coding MGP_129S1SvImJ_T0042222.1 MGP_129S1SvImJ_G0022228.1 mouse_genomes_project 15 90547026 90564114 + MGP_129S1SvImJ_P0042222 Ncaph2 protein_coding protein_coding MGP_129S1SvImJ_T0042223.1 MGP_129S1SvImJ_G0022228.1 mouse_genomes_project 15 90547026 90564114 + MGP_129S1SvImJ_P0042223 Ncaph2 protein_coding protein_coding MGP_129S1SvImJ_T0042224.1 MGP_129S1SvImJ_G0022228.1 mouse_genomes_project 15 90547053 90564114 + MGP_129S1SvImJ_P0042224 Ncaph2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042225.1 MGP_129S1SvImJ_G0022228.1 mouse_genomes_project 15 90547095 90555168 + Ncaph2 protein_coding retained_intron MGP_129S1SvImJ_T0042226.1 MGP_129S1SvImJ_G0022228.1 mouse_genomes_project 15 90547111 90555192 + Ncaph2 protein_coding retained_intron MGP_129S1SvImJ_T0042227.1 MGP_129S1SvImJ_G0022228.1 mouse_genomes_project 15 90547204 90556619 + Ncaph2 protein_coding retained_intron MGP_129S1SvImJ_T0042228.1 MGP_129S1SvImJ_G0022228.1 mouse_genomes_project 15 90560979 90561963 + Ncaph2 protein_coding retained_intron MGP_129S1SvImJ_T0042229.1 MGP_129S1SvImJ_G0022228.1 mouse_genomes_project 15 90561165 90562528 + Ncaph2 protein_coding retained_intron MGP_129S1SvImJ_T0042230.1 MGP_129S1SvImJ_G0022228.1 mouse_genomes_project 15 90561320 90562477 + Ncaph2 protein_coding retained_intron MGP_129S1SvImJ_T0042231.1 MGP_129S1SvImJ_G0022228.1 mouse_genomes_project 15 90561585 90562220 + Ncaph2 protein_coding retained_intron MGP_129S1SvImJ_T0042232.1 MGP_129S1SvImJ_G0022228.1 mouse_genomes_project 15 90561934 90562812 + Ncaph2 protein_coding retained_intron MGP_129S1SvImJ_T0042233.1 MGP_129S1SvImJ_G0022228.1 mouse_genomes_project 15 90562040 90562851 + Ncaph2 protein_coding retained_intron MGP_129S1SvImJ_T0042702.1 MGP_129S1SvImJ_G0022379.1 mouse_genomes_project 15 103652793 103663353 - MGP_129S1SvImJ_P0042702 Krt90 protein_coding protein_coding MGP_129S1SvImJ_T0040893.1 MGP_129S1SvImJ_G0021825.1 mouse_genomes_project 15 41832974 41865605 - MGP_129S1SvImJ_P0040893 Eif3e protein_coding protein_coding MGP_129S1SvImJ_T0042190.1 MGP_129S1SvImJ_G0022219.1 mouse_genomes_project 15 90305329 90315341 - MGP_129S1SvImJ_P0042190 Mapk12 protein_coding protein_coding MGP_129S1SvImJ_T0042711.1 MGP_129S1SvImJ_G0022387.1 mouse_genomes_project 15 103928838 103937874 - MGP_129S1SvImJ_P0042711 Krt73 protein_coding protein_coding MGP_129S1SvImJ_T0041383.1 MGP_129S1SvImJ_G0021984.1 mouse_genomes_project 15 76400448 76404125 + MGP_129S1SvImJ_P0041383 Gpaa1 protein_coding protein_coding MGP_129S1SvImJ_T0041384.1 MGP_129S1SvImJ_G0021984.1 mouse_genomes_project 15 76400561 76404116 + MGP_129S1SvImJ_P0041384 Gpaa1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041385.1 MGP_129S1SvImJ_G0021984.1 mouse_genomes_project 15 76400562 76404121 + MGP_129S1SvImJ_P0041385 Gpaa1 protein_coding protein_coding MGP_129S1SvImJ_T0041386.1 MGP_129S1SvImJ_G0021984.1 mouse_genomes_project 15 76400567 76402032 + Gpaa1 protein_coding retained_intron MGP_129S1SvImJ_T0041387.1 MGP_129S1SvImJ_G0021984.1 mouse_genomes_project 15 76400730 76401704 + MGP_129S1SvImJ_P0041387 Gpaa1 protein_coding protein_coding MGP_129S1SvImJ_T0041388.1 MGP_129S1SvImJ_G0021984.1 mouse_genomes_project 15 76401216 76402139 + MGP_129S1SvImJ_P0041388 Gpaa1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041389.1 MGP_129S1SvImJ_G0021984.1 mouse_genomes_project 15 76401440 76402835 + Gpaa1 protein_coding retained_intron MGP_129S1SvImJ_T0041390.1 MGP_129S1SvImJ_G0021984.1 mouse_genomes_project 15 76401744 76402465 + MGP_129S1SvImJ_P0041390 Gpaa1 protein_coding protein_coding MGP_129S1SvImJ_T0041391.1 MGP_129S1SvImJ_G0021984.1 mouse_genomes_project 15 76402386 76403511 + Gpaa1 protein_coding retained_intron MGP_129S1SvImJ_T0041392.1 MGP_129S1SvImJ_G0021984.1 mouse_genomes_project 15 76402948 76403516 + Gpaa1 protein_coding retained_intron MGP_129S1SvImJ_T0100749.1 MGP_129S1SvImJ_G0038816.1 mouse_genomes_project 15 60641873 60642007 - Gm24696 snoRNA snoRNA MGP_129S1SvImJ_T0042513.1 MGP_129S1SvImJ_G0022324.1 mouse_genomes_project 15 100938361 101024799 + MGP_129S1SvImJ_P0042513 Spats2 protein_coding protein_coding MGP_129S1SvImJ_T0011402.1 MGP_129S1SvImJ_G0009518.1 mouse_genomes_project 15 7167401 7167689 + Gm26350 misc_RNA misc_RNA MGP_129S1SvImJ_T0099475.1 MGP_129S1SvImJ_G0037542.1 mouse_genomes_project 15 86210801 86210993 - Gm23517 snRNA snRNA MGP_129S1SvImJ_T0041557.1 MGP_129S1SvImJ_G0022031.1 mouse_genomes_project 15 77894230 77975712 - MGP_129S1SvImJ_P0041557 Myh9 protein_coding protein_coding MGP_129S1SvImJ_T0041558.1 MGP_129S1SvImJ_G0022031.1 mouse_genomes_project 15 77898953 77900816 - Myh9 protein_coding retained_intron MGP_129S1SvImJ_T0041559.1 MGP_129S1SvImJ_G0022031.1 mouse_genomes_project 15 77921816 77975593 - Myh9 protein_coding retained_intron MGP_129S1SvImJ_T0041560.1 MGP_129S1SvImJ_G0022031.1 mouse_genomes_project 15 77923849 77975642 - Myh9 protein_coding retained_intron MGP_129S1SvImJ_T0041561.1 MGP_129S1SvImJ_G0022031.1 mouse_genomes_project 15 77924365 77975584 - MGP_129S1SvImJ_P0041561 Myh9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041562.1 MGP_129S1SvImJ_G0022031.1 mouse_genomes_project 15 77928308 77946871 - Myh9 protein_coding processed_transcript MGP_129S1SvImJ_T0041563.1 MGP_129S1SvImJ_G0022031.1 mouse_genomes_project 15 77939192 77975642 - Myh9 protein_coding retained_intron MGP_129S1SvImJ_T0013079.1 MGP_129S1SvImJ_G0011168.1 mouse_genomes_project 15 10713383 10714070 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0041692.1 MGP_129S1SvImJ_G0022071.1 mouse_genomes_project 15 79542969 79586496 - MGP_129S1SvImJ_P0041692 Pla2g6 protein_coding protein_coding MGP_129S1SvImJ_T0041693.1 MGP_129S1SvImJ_G0022071.1 mouse_genomes_project 15 79542969 79586444 - MGP_129S1SvImJ_P0041693 Pla2g6 protein_coding protein_coding MGP_129S1SvImJ_T0041694.1 MGP_129S1SvImJ_G0022071.1 mouse_genomes_project 15 79542969 79586471 - MGP_129S1SvImJ_P0041694 Pla2g6 protein_coding protein_coding MGP_129S1SvImJ_T0041695.1 MGP_129S1SvImJ_G0022071.1 mouse_genomes_project 15 79542969 79586232 - MGP_129S1SvImJ_P0041695 Pla2g6 protein_coding protein_coding MGP_129S1SvImJ_T0041696.1 MGP_129S1SvImJ_G0022071.1 mouse_genomes_project 15 79542973 79586521 - MGP_129S1SvImJ_P0041696 Pla2g6 protein_coding protein_coding MGP_129S1SvImJ_T0041697.1 MGP_129S1SvImJ_G0022071.1 mouse_genomes_project 15 79545852 79562849 - Pla2g6 protein_coding retained_intron MGP_129S1SvImJ_T0041698.1 MGP_129S1SvImJ_G0022071.1 mouse_genomes_project 15 79561365 79564070 - Pla2g6 protein_coding retained_intron MGP_129S1SvImJ_T0041699.1 MGP_129S1SvImJ_G0022071.1 mouse_genomes_project 15 79564025 79567152 - Pla2g6 protein_coding retained_intron MGP_129S1SvImJ_T0041700.1 MGP_129S1SvImJ_G0022071.1 mouse_genomes_project 15 79567208 79586658 - MGP_129S1SvImJ_P0041700 Pla2g6 protein_coding protein_coding MGP_129S1SvImJ_T0041701.1 MGP_129S1SvImJ_G0022071.1 mouse_genomes_project 15 79569025 79576444 - Pla2g6 protein_coding retained_intron MGP_129S1SvImJ_T0041702.1 MGP_129S1SvImJ_G0022071.1 mouse_genomes_project 15 79569093 79581836 - MGP_129S1SvImJ_P0041702 Pla2g6 protein_coding protein_coding MGP_129S1SvImJ_T0041703.1 MGP_129S1SvImJ_G0022071.1 mouse_genomes_project 15 79576302 79582758 - MGP_129S1SvImJ_P0041703 Pla2g6 protein_coding protein_coding MGP_129S1SvImJ_T0041454.1 MGP_129S1SvImJ_G0021999.1 mouse_genomes_project 15 76653632 76679424 + MGP_129S1SvImJ_P0041454 Adck5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041455.1 MGP_129S1SvImJ_G0021999.1 mouse_genomes_project 15 76653652 76679432 + Adck5 protein_coding retained_intron MGP_129S1SvImJ_T0041456.1 MGP_129S1SvImJ_G0021999.1 mouse_genomes_project 15 76653678 76675439 + Adck5 protein_coding processed_transcript MGP_129S1SvImJ_T0041457.1 MGP_129S1SvImJ_G0021999.1 mouse_genomes_project 15 76653685 76679425 + Adck5 protein_coding retained_intron MGP_129S1SvImJ_T0041458.1 MGP_129S1SvImJ_G0021999.1 mouse_genomes_project 15 76653686 76673341 + Adck5 protein_coding processed_transcript MGP_129S1SvImJ_T0041459.1 MGP_129S1SvImJ_G0021999.1 mouse_genomes_project 15 76653747 76679266 + MGP_129S1SvImJ_P0041459 Adck5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041460.1 MGP_129S1SvImJ_G0021999.1 mouse_genomes_project 15 76653756 76679412 + MGP_129S1SvImJ_P0041460 Adck5 protein_coding protein_coding MGP_129S1SvImJ_T0041461.1 MGP_129S1SvImJ_G0021999.1 mouse_genomes_project 15 76677053 76677786 + Adck5 protein_coding retained_intron MGP_129S1SvImJ_T0041462.1 MGP_129S1SvImJ_G0021999.1 mouse_genomes_project 15 76677516 76678772 + Adck5 protein_coding retained_intron MGP_129S1SvImJ_T0041463.1 MGP_129S1SvImJ_G0021999.1 mouse_genomes_project 15 76677783 76678804 + Adck5 protein_coding retained_intron MGP_129S1SvImJ_T0041464.1 MGP_129S1SvImJ_G0021999.1 mouse_genomes_project 15 76677908 76679432 + Adck5 protein_coding retained_intron MGP_129S1SvImJ_T0041465.1 MGP_129S1SvImJ_G0021999.1 mouse_genomes_project 15 76678437 76678779 + Adck5 protein_coding retained_intron MGP_129S1SvImJ_T0041466.1 MGP_129S1SvImJ_G0021999.1 mouse_genomes_project 15 76678579 76679332 + Adck5 protein_coding retained_intron MGP_129S1SvImJ_T0042292.1 MGP_129S1SvImJ_G0022246.1 mouse_genomes_project 15 92422506 92471056 - MGP_129S1SvImJ_P0042292 Abcd2 protein_coding protein_coding MGP_129S1SvImJ_T0042683.1 MGP_129S1SvImJ_G0022366.1 mouse_genomes_project 15 103237872 103260497 + MGP_129S1SvImJ_P0042683 Acvr1b protein_coding protein_coding MGP_129S1SvImJ_T0040988.1 MGP_129S1SvImJ_G0021862.1 mouse_genomes_project 15 57021285 57044800 - MGP_129S1SvImJ_P0040988 Derl1 protein_coding protein_coding MGP_129S1SvImJ_T0041611.1 MGP_129S1SvImJ_G0022048.1 mouse_genomes_project 15 78758597 78774715 - MGP_129S1SvImJ_P0041611 Rac2 protein_coding protein_coding MGP_129S1SvImJ_T0041953.1 MGP_129S1SvImJ_G0022144.1 mouse_genomes_project 15 82853597 82863704 + Smdt1 protein_coding processed_transcript MGP_129S1SvImJ_T0041956.1 MGP_129S1SvImJ_G0022144.1 mouse_genomes_project 15 82855620 82863652 + Smdt1 protein_coding processed_transcript MGP_129S1SvImJ_T0041958.1 MGP_129S1SvImJ_G0022144.1 mouse_genomes_project 15 82860593 82863735 + MGP_129S1SvImJ_P0041958 Smdt1 protein_coding protein_coding MGP_129S1SvImJ_T0041959.1 MGP_129S1SvImJ_G0022144.1 mouse_genomes_project 15 82860653 82863736 + MGP_129S1SvImJ_P0041959 Smdt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041960.1 MGP_129S1SvImJ_G0022144.1 mouse_genomes_project 15 82861859 82863514 + MGP_129S1SvImJ_P0041960 Smdt1 protein_coding protein_coding MGP_129S1SvImJ_T0013125.1 MGP_129S1SvImJ_G0011214.1 mouse_genomes_project 15 93157970 93158507 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006757.1 MGP_129S1SvImJ_G0005584.1 mouse_genomes_project 15 15657909 15752250 - 4921515E04Rik lincRNA lincRNA MGP_129S1SvImJ_T0042556.1 MGP_129S1SvImJ_G0022337.1 mouse_genomes_project 15 101480842 101517698 - MGP_129S1SvImJ_P0042556 Racgap1 protein_coding protein_coding MGP_129S1SvImJ_T0042557.1 MGP_129S1SvImJ_G0022337.1 mouse_genomes_project 15 101480843 101517711 - MGP_129S1SvImJ_P0042557 Racgap1 protein_coding protein_coding MGP_129S1SvImJ_T0042558.1 MGP_129S1SvImJ_G0022337.1 mouse_genomes_project 15 101487914 101494373 - Racgap1 protein_coding retained_intron MGP_129S1SvImJ_T0042559.1 MGP_129S1SvImJ_G0022337.1 mouse_genomes_project 15 101488194 101517644 - Racgap1 protein_coding processed_transcript MGP_129S1SvImJ_T0042560.1 MGP_129S1SvImJ_G0022337.1 mouse_genomes_project 15 101490257 101517637 - Racgap1 protein_coding retained_intron MGP_129S1SvImJ_T0042561.1 MGP_129S1SvImJ_G0022337.1 mouse_genomes_project 15 101490257 101501533 - Racgap1 protein_coding retained_intron MGP_129S1SvImJ_T0042562.1 MGP_129S1SvImJ_G0022337.1 mouse_genomes_project 15 101490257 101503082 - MGP_129S1SvImJ_P0042562 Racgap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042563.1 MGP_129S1SvImJ_G0022337.1 mouse_genomes_project 15 101493711 101517707 - MGP_129S1SvImJ_P0042563 Racgap1 protein_coding protein_coding MGP_129S1SvImJ_T0042564.1 MGP_129S1SvImJ_G0022337.1 mouse_genomes_project 15 101493727 101496340 - Racgap1 protein_coding retained_intron MGP_129S1SvImJ_T0042565.1 MGP_129S1SvImJ_G0022337.1 mouse_genomes_project 15 101495858 101517624 - MGP_129S1SvImJ_P0042565 Racgap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042566.1 MGP_129S1SvImJ_G0022337.1 mouse_genomes_project 15 101499419 101517667 - MGP_129S1SvImJ_P0042566 Racgap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042567.1 MGP_129S1SvImJ_G0022337.1 mouse_genomes_project 15 101500723 101517637 - Racgap1 protein_coding retained_intron MGP_129S1SvImJ_T0042568.1 MGP_129S1SvImJ_G0022337.1 mouse_genomes_project 15 101500937 101517667 - MGP_129S1SvImJ_P0042568 Racgap1 protein_coding protein_coding MGP_129S1SvImJ_T0042569.1 MGP_129S1SvImJ_G0022337.1 mouse_genomes_project 15 101503063 101517698 - MGP_129S1SvImJ_P0042569 Racgap1 protein_coding protein_coding MGP_129S1SvImJ_T0011411.1 MGP_129S1SvImJ_G0009527.1 mouse_genomes_project 15 61534547 61534674 + Gm27957 misc_RNA misc_RNA MGP_129S1SvImJ_T0040895.1 MGP_129S1SvImJ_G0021827.1 mouse_genomes_project 15 42463319 42466632 - MGP_129S1SvImJ_P0040895 Tmem74 protein_coding protein_coding MGP_129S1SvImJ_T0041039.1 MGP_129S1SvImJ_G0021885.1 mouse_genomes_project 15 58897983 58907463 + MGP_129S1SvImJ_P0041039 Trib1 protein_coding protein_coding MGP_129S1SvImJ_T0041040.1 MGP_129S1SvImJ_G0021885.1 mouse_genomes_project 15 58898286 58904602 + MGP_129S1SvImJ_P0041040 Trib1 protein_coding protein_coding MGP_129S1SvImJ_T0041333.1 MGP_129S1SvImJ_G0021974.1 mouse_genomes_project 15 76122245 76133010 - MGP_129S1SvImJ_P0041333 Puf60 protein_coding protein_coding MGP_129S1SvImJ_T0041334.1 MGP_129S1SvImJ_G0021974.1 mouse_genomes_project 15 76122245 76133010 - MGP_129S1SvImJ_P0041334 Puf60 protein_coding protein_coding MGP_129S1SvImJ_T0099435.1 MGP_129S1SvImJ_G0037502.1 mouse_genomes_project 15 1926619 1926722 + Gm25652 snRNA snRNA MGP_129S1SvImJ_T0003635.1 MGP_129S1SvImJ_G0003294.1 mouse_genomes_project 15 79148162 79149857 - 1700027A07Rik antisense antisense MGP_129S1SvImJ_T0041032.1 MGP_129S1SvImJ_G0021882.1 mouse_genomes_project 15 58532340 58546199 + Sqle protein_coding retained_intron MGP_129S1SvImJ_T0041033.1 MGP_129S1SvImJ_G0021882.1 mouse_genomes_project 15 58532344 58548435 + MGP_129S1SvImJ_P0041033 Sqle protein_coding protein_coding MGP_129S1SvImJ_T0041034.1 MGP_129S1SvImJ_G0021882.1 mouse_genomes_project 15 58532370 58548435 + MGP_129S1SvImJ_P0041034 Sqle protein_coding protein_coding MGP_129S1SvImJ_T0041035.1 MGP_129S1SvImJ_G0021882.1 mouse_genomes_project 15 58542805 58544440 + Sqle protein_coding retained_intron MGP_129S1SvImJ_T0099458.1 MGP_129S1SvImJ_G0037525.1 mouse_genomes_project 15 59347625 59347732 + Gm25875 snRNA snRNA MGP_129S1SvImJ_T0100735.1 MGP_129S1SvImJ_G0038802.1 mouse_genomes_project 15 32579912 32579963 - Gm25809 snoRNA snoRNA MGP_129S1SvImJ_T0041029.1 MGP_129S1SvImJ_G0021880.1 mouse_genomes_project 15 58137316 58142988 + MGP_129S1SvImJ_P0041029 Ndufb9 protein_coding protein_coding MGP_129S1SvImJ_T0041469.1 MGP_129S1SvImJ_G0022002.1 mouse_genomes_project 15 76711411 76715351 - MGP_129S1SvImJ_P0041469 Tonsl protein_coding protein_coding MGP_129S1SvImJ_T0041470.1 MGP_129S1SvImJ_G0022002.1 mouse_genomes_project 15 76715325 76718623 - MGP_129S1SvImJ_P0041470 Tonsl protein_coding protein_coding MGP_129S1SvImJ_T0041471.1 MGP_129S1SvImJ_G0022002.1 mouse_genomes_project 15 76715561 76731135 - MGP_129S1SvImJ_P0041471 Tonsl protein_coding protein_coding MGP_129S1SvImJ_T0041472.1 MGP_129S1SvImJ_G0022002.1 mouse_genomes_project 15 76715562 76718704 - Tonsl protein_coding retained_intron MGP_129S1SvImJ_T0041473.1 MGP_129S1SvImJ_G0022002.1 mouse_genomes_project 15 76722096 76723000 - MGP_129S1SvImJ_P0041473 Tonsl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041474.1 MGP_129S1SvImJ_G0022002.1 mouse_genomes_project 15 76722129 76731106 - MGP_129S1SvImJ_P0041474 Tonsl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041475.1 MGP_129S1SvImJ_G0022002.1 mouse_genomes_project 15 76728364 76729456 - Tonsl protein_coding retained_intron MGP_129S1SvImJ_T0041476.1 MGP_129S1SvImJ_G0022002.1 mouse_genomes_project 15 76729733 76730815 - Tonsl protein_coding retained_intron MGP_129S1SvImJ_T0041477.1 MGP_129S1SvImJ_G0022002.1 mouse_genomes_project 15 76730035 76731017 - MGP_129S1SvImJ_P0041477 Tonsl protein_coding protein_coding MGP_129S1SvImJ_T0099469.1 MGP_129S1SvImJ_G0037536.1 mouse_genomes_project 15 77397504 77397650 - Gm24056 snRNA snRNA MGP_129S1SvImJ_T0042241.1 MGP_129S1SvImJ_G0022234.1 mouse_genomes_project 15 90611078 90625401 - Chkb protein_coding retained_intron MGP_129S1SvImJ_T0042245.1 MGP_129S1SvImJ_G0022234.1 mouse_genomes_project 15 90622064 90625565 - Chkb protein_coding retained_intron MGP_129S1SvImJ_T0042246.1 MGP_129S1SvImJ_G0022234.1 mouse_genomes_project 15 90622064 90622866 - Chkb protein_coding processed_transcript MGP_129S1SvImJ_T0042247.1 MGP_129S1SvImJ_G0022234.1 mouse_genomes_project 15 90622071 90625144 - Chkb protein_coding retained_intron MGP_129S1SvImJ_T0042248.1 MGP_129S1SvImJ_G0022234.1 mouse_genomes_project 15 90622071 90625604 - MGP_129S1SvImJ_P0042248 Chkb protein_coding protein_coding MGP_129S1SvImJ_T0042249.1 MGP_129S1SvImJ_G0022234.1 mouse_genomes_project 15 90622145 90624198 - MGP_129S1SvImJ_P0042249 Chkb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042250.1 MGP_129S1SvImJ_G0022234.1 mouse_genomes_project 15 90622172 90622864 - Chkb protein_coding retained_intron MGP_129S1SvImJ_T0042251.1 MGP_129S1SvImJ_G0022234.1 mouse_genomes_project 15 90622819 90625613 - Chkb protein_coding retained_intron MGP_129S1SvImJ_T0042252.1 MGP_129S1SvImJ_G0022234.1 mouse_genomes_project 15 90623084 90625135 - Chkb protein_coding retained_intron MGP_129S1SvImJ_T0042253.1 MGP_129S1SvImJ_G0022234.1 mouse_genomes_project 15 90623339 90624798 - MGP_129S1SvImJ_P0042253 Chkb protein_coding protein_coding MGP_129S1SvImJ_T0042081.1 MGP_129S1SvImJ_G0022184.1 mouse_genomes_project 15 85734930 85754387 + MGP_129S1SvImJ_P0042081 Nup50 protein_coding protein_coding MGP_129S1SvImJ_T0003642.1 MGP_129S1SvImJ_G0003297.1 mouse_genomes_project 15 81837428 81841057 - Gm17025 antisense antisense MGP_129S1SvImJ_T0010110.1 MGP_129S1SvImJ_G0008226.1 mouse_genomes_project 15 103240906 103240969 + Mir6962 miRNA miRNA MGP_129S1SvImJ_T0011422.1 MGP_129S1SvImJ_G0009538.1 mouse_genomes_project 15 105185107 105185282 + Gm28011 misc_RNA misc_RNA MGP_129S1SvImJ_T0040867.1 MGP_129S1SvImJ_G0021814.1 mouse_genomes_project 15 37534219 37569961 + MGP_129S1SvImJ_P0040867 Dcaf13 protein_coding protein_coding MGP_129S1SvImJ_T0041721.1 MGP_129S1SvImJ_G0022076.1 mouse_genomes_project 15 79794187 79805428 + MGP_129S1SvImJ_P0041721 Kdelr3 protein_coding protein_coding MGP_129S1SvImJ_T0041483.1 MGP_129S1SvImJ_G0022004.1 mouse_genomes_project 15 76754110 76761583 + MGP_129S1SvImJ_P0041483 Kifc2 protein_coding protein_coding MGP_129S1SvImJ_T0042135.1 MGP_129S1SvImJ_G0022206.1 mouse_genomes_project 15 89824982 89876220 - MGP_129S1SvImJ_P0042135 Brd1 protein_coding protein_coding MGP_129S1SvImJ_T0042136.1 MGP_129S1SvImJ_G0022206.1 mouse_genomes_project 15 89825978 89872937 - MGP_129S1SvImJ_P0042136 Brd1 protein_coding protein_coding MGP_129S1SvImJ_T0042137.1 MGP_129S1SvImJ_G0022206.1 mouse_genomes_project 15 89835296 89840113 - Brd1 protein_coding processed_transcript MGP_129S1SvImJ_T0042138.1 MGP_129S1SvImJ_G0022206.1 mouse_genomes_project 15 89838099 89876217 - MGP_129S1SvImJ_P0042138 Brd1 protein_coding protein_coding MGP_129S1SvImJ_T0042139.1 MGP_129S1SvImJ_G0022206.1 mouse_genomes_project 15 89854003 89860251 - Brd1 protein_coding processed_transcript MGP_129S1SvImJ_T0042140.1 MGP_129S1SvImJ_G0022206.1 mouse_genomes_project 15 89854536 89858136 - Brd1 protein_coding processed_transcript MGP_129S1SvImJ_T0040904.1 MGP_129S1SvImJ_G0021832.1 mouse_genomes_project 15 43240639 43262550 + MGP_129S1SvImJ_P0040904 Ebag9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0010083.1 MGP_129S1SvImJ_G0008199.1 mouse_genomes_project 15 82031006 82031060 + Gm23880 miRNA miRNA MGP_129S1SvImJ_T0042242.1 MGP_129S1SvImJ_G0022235.1 mouse_genomes_project 15 90611078 90621568 - MGP_129S1SvImJ_P0042242 Cpt1b protein_coding protein_coding MGP_129S1SvImJ_T0042243.1 MGP_129S1SvImJ_G0022235.1 mouse_genomes_project 15 90613427 90616019 - MGP_129S1SvImJ_P0042243 Cpt1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042244.1 MGP_129S1SvImJ_G0022235.1 mouse_genomes_project 15 90618359 90619067 - Cpt1b protein_coding retained_intron MGP_129S1SvImJ_T0042086.1 MGP_129S1SvImJ_G0022187.1 mouse_genomes_project 15 85867614 85891412 + MGP_129S1SvImJ_P0042086 Fam118a protein_coding protein_coding MGP_129S1SvImJ_T0042507.1 MGP_129S1SvImJ_G0022320.1 mouse_genomes_project 15 100851813 100855604 + MGP_129S1SvImJ_P0042507 Prph protein_coding protein_coding MGP_129S1SvImJ_T0042508.1 MGP_129S1SvImJ_G0022320.1 mouse_genomes_project 15 100851813 100855604 + MGP_129S1SvImJ_P0042508 Prph protein_coding protein_coding MGP_129S1SvImJ_T0013092.1 MGP_129S1SvImJ_G0011181.1 mouse_genomes_project 15 39150929 39151424 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100720.1 MGP_129S1SvImJ_G0038787.1 mouse_genomes_project 15 2022037 2022118 + Snord72 snoRNA snoRNA MGP_129S1SvImJ_T0041587.1 MGP_129S1SvImJ_G0022039.1 mouse_genomes_project 15 78512600 78542240 + MGP_129S1SvImJ_P0041587 Csf2rb protein_coding protein_coding MGP_129S1SvImJ_T0099477.1 MGP_129S1SvImJ_G0037544.1 mouse_genomes_project 15 89993680 89993787 + Gm23144 snRNA snRNA MGP_129S1SvImJ_T0042336.1 MGP_129S1SvImJ_G0022258.1 mouse_genomes_project 15 95730549 95861482 - MGP_129S1SvImJ_P0042336 Adamts20 protein_coding protein_coding MGP_129S1SvImJ_T0042337.1 MGP_129S1SvImJ_G0022258.1 mouse_genomes_project 15 95775304 95861482 - MGP_129S1SvImJ_P0042337 Adamts20 protein_coding protein_coding MGP_129S1SvImJ_T0042338.1 MGP_129S1SvImJ_G0022258.1 mouse_genomes_project 15 95806398 95861574 - Adamts20 protein_coding retained_intron MGP_129S1SvImJ_T0042339.1 MGP_129S1SvImJ_G0022258.1 mouse_genomes_project 15 95851957 95926009 - Adamts20 protein_coding processed_transcript MGP_129S1SvImJ_T0041551.1 MGP_129S1SvImJ_G0022026.1 mouse_genomes_project 15 77691773 77701291 - MGP_129S1SvImJ_P0041551 1700025B11Rik protein_coding protein_coding MGP_129S1SvImJ_T0100731.1 MGP_129S1SvImJ_G0038798.1 mouse_genomes_project 15 28240953 28241131 - Gm26163 snoRNA snoRNA MGP_129S1SvImJ_T0040953.1 MGP_129S1SvImJ_G0021852.1 mouse_genomes_project 15 54128375 54159995 - MGP_129S1SvImJ_P0040953 Dscc1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040954.1 MGP_129S1SvImJ_G0021852.1 mouse_genomes_project 15 54145310 54160061 - MGP_129S1SvImJ_P0040954 Dscc1 protein_coding protein_coding MGP_129S1SvImJ_T0040955.1 MGP_129S1SvImJ_G0021852.1 mouse_genomes_project 15 54145313 54160050 - MGP_129S1SvImJ_P0040955 Dscc1 protein_coding protein_coding MGP_129S1SvImJ_T0040956.1 MGP_129S1SvImJ_G0021852.1 mouse_genomes_project 15 54153274 54157333 - Dscc1 protein_coding retained_intron MGP_129S1SvImJ_T0099485.1 MGP_129S1SvImJ_G0037552.1 mouse_genomes_project 15 101835010 101835145 - Gm23133 snRNA snRNA MGP_129S1SvImJ_T0040684.1 MGP_129S1SvImJ_G0021748.1 mouse_genomes_project 15 23344464 23398618 - MGP_129S1SvImJ_P0040684 Basp1 protein_coding protein_coding MGP_129S1SvImJ_T0041013.1 MGP_129S1SvImJ_G0021868.1 mouse_genomes_project 15 57252574 57296487 - MGP_129S1SvImJ_P0041013 Atad2 protein_coding protein_coding MGP_129S1SvImJ_T0040861.1 MGP_129S1SvImJ_G0021811.1 mouse_genomes_project 15 37423119 37454167 + MGP_129S1SvImJ_P0040861 Fzd6 protein_coding protein_coding MGP_129S1SvImJ_T0040862.1 MGP_129S1SvImJ_G0021811.1 mouse_genomes_project 15 37423172 37454167 + MGP_129S1SvImJ_P0040862 Fzd6 protein_coding protein_coding MGP_129S1SvImJ_T0006790.1 MGP_129S1SvImJ_G0005604.1 mouse_genomes_project 15 74906960 74909845 - Gm28502 lincRNA lincRNA MGP_129S1SvImJ_T0040514.1 MGP_129S1SvImJ_G0021699.1 mouse_genomes_project 15 3809799 3872696 - MGP_129S1SvImJ_P0040514 Osmr protein_coding protein_coding MGP_129S1SvImJ_T0040515.1 MGP_129S1SvImJ_G0021699.1 mouse_genomes_project 15 3811259 3872696 - MGP_129S1SvImJ_P0040515 Osmr protein_coding protein_coding MGP_129S1SvImJ_T0040516.1 MGP_129S1SvImJ_G0021699.1 mouse_genomes_project 15 3816782 3820670 - Osmr protein_coding retained_intron MGP_129S1SvImJ_T0040517.1 MGP_129S1SvImJ_G0021699.1 mouse_genomes_project 15 3831058 3871995 - Osmr protein_coding retained_intron MGP_129S1SvImJ_T0040518.1 MGP_129S1SvImJ_G0021699.1 mouse_genomes_project 15 3838902 3871984 - Osmr protein_coding retained_intron MGP_129S1SvImJ_T0040519.1 MGP_129S1SvImJ_G0021699.1 mouse_genomes_project 15 3849914 3872023 - Osmr protein_coding retained_intron MGP_129S1SvImJ_T0042489.1 MGP_129S1SvImJ_G0022313.1 mouse_genomes_project 15 100575380 100595136 - MGP_129S1SvImJ_P0042489 Prkag1 protein_coding protein_coding MGP_129S1SvImJ_T0042433.1 MGP_129S1SvImJ_G0022288.1 mouse_genomes_project 15 99885538 99892715 - protein_coding processed_transcript MGP_129S1SvImJ_T0013090.1 MGP_129S1SvImJ_G0011179.1 mouse_genomes_project 15 36339860 36340265 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101636.1 MGP_129S1SvImJ_G0039671.1 mouse_genomes_project 15 58521787 58529351 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101637.1 MGP_129S1SvImJ_G0039671.1 mouse_genomes_project 15 58528190 58529268 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0010070.1 MGP_129S1SvImJ_G0008186.1 mouse_genomes_project 15 76311775 76311843 + Mir6953 miRNA miRNA MGP_129S1SvImJ_T0041017.1 MGP_129S1SvImJ_G0021872.1 mouse_genomes_project 15 57511540 57574984 - MGP_129S1SvImJ_P0041017 Anxa13 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0041018.1 MGP_129S1SvImJ_G0021872.1 mouse_genomes_project 15 57511867 57547021 - MGP_129S1SvImJ_P0041018 Anxa13 protein_coding protein_coding MGP_129S1SvImJ_T0042576.1 MGP_129S1SvImJ_G0022342.1 mouse_genomes_project 15 101602868 101605172 + MGP_129S1SvImJ_P0042576 Cox14 protein_coding protein_coding MGP_129S1SvImJ_T0010046.1 MGP_129S1SvImJ_G0008162.1 mouse_genomes_project 15 10089159 10089299 + miRNA miRNA MGP_129S1SvImJ_T0042293.1 MGP_129S1SvImJ_G0022247.1 mouse_genomes_project 15 92479560 92550115 + MGP_129S1SvImJ_P0042293 CN725425 protein_coding protein_coding MGP_129S1SvImJ_T0042294.1 MGP_129S1SvImJ_G0022247.1 mouse_genomes_project 15 92479642 92550115 + MGP_129S1SvImJ_P0042294 CN725425 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042295.1 MGP_129S1SvImJ_G0022247.1 mouse_genomes_project 15 92519360 92550106 + MGP_129S1SvImJ_P0042295 CN725425 protein_coding protein_coding MGP_129S1SvImJ_T0040933.1 MGP_129S1SvImJ_G0021841.1 mouse_genomes_project 15 51269617 51314696 + MGP_129S1SvImJ_P0040933 Slc30a8 protein_coding protein_coding MGP_129S1SvImJ_T0011419.1 MGP_129S1SvImJ_G0009535.1 mouse_genomes_project 15 104674415 104674597 + Gm27406 misc_RNA misc_RNA MGP_129S1SvImJ_T0041847.1 MGP_129S1SvImJ_G0022111.1 mouse_genomes_project 15 81822017 81849837 + Xpnpep3 protein_coding retained_intron MGP_129S1SvImJ_T0041848.1 MGP_129S1SvImJ_G0022111.1 mouse_genomes_project 15 81822037 81838178 + Xpnpep3 protein_coding retained_intron MGP_129S1SvImJ_T0041849.1 MGP_129S1SvImJ_G0022111.1 mouse_genomes_project 15 81822063 81876208 + MGP_129S1SvImJ_P0041849 Xpnpep3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041850.1 MGP_129S1SvImJ_G0022111.1 mouse_genomes_project 15 81822064 81860123 + MGP_129S1SvImJ_P0041850 Xpnpep3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041851.1 MGP_129S1SvImJ_G0022111.1 mouse_genomes_project 15 81822091 81880632 + MGP_129S1SvImJ_P0041851 Xpnpep3 protein_coding protein_coding MGP_129S1SvImJ_T0041852.1 MGP_129S1SvImJ_G0022111.1 mouse_genomes_project 15 81822100 81849421 + Xpnpep3 protein_coding processed_transcript MGP_129S1SvImJ_T0041804.1 MGP_129S1SvImJ_G0022102.1 mouse_genomes_project 15 81041233 81069793 + MGP_129S1SvImJ_P0041804 Fam83f protein_coding protein_coding MGP_129S1SvImJ_T0042356.1 MGP_129S1SvImJ_G0022266.1 mouse_genomes_project 15 97318274 97525827 + MGP_129S1SvImJ_P0042356 Ano6 protein_coding protein_coding MGP_129S1SvImJ_T0042357.1 MGP_129S1SvImJ_G0022266.1 mouse_genomes_project 15 97318415 97525840 + MGP_129S1SvImJ_P0042357 Ano6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0041842.1 MGP_129S1SvImJ_G0022110.1 mouse_genomes_project 15 81785596 81821911 - MGP_129S1SvImJ_P0041842 St13 protein_coding protein_coding MGP_129S1SvImJ_T0041843.1 MGP_129S1SvImJ_G0022110.1 mouse_genomes_project 15 81787367 81821462 - MGP_129S1SvImJ_P0041843 St13 protein_coding protein_coding MGP_129S1SvImJ_T0041844.1 MGP_129S1SvImJ_G0022110.1 mouse_genomes_project 15 81799680 81821251 - MGP_129S1SvImJ_P0041844 St13 protein_coding protein_coding MGP_129S1SvImJ_T0041845.1 MGP_129S1SvImJ_G0022110.1 mouse_genomes_project 15 81811526 81821945 - MGP_129S1SvImJ_P0041845 St13 protein_coding protein_coding MGP_129S1SvImJ_T0041846.1 MGP_129S1SvImJ_G0022110.1 mouse_genomes_project 15 81814144 81821941 - MGP_129S1SvImJ_P0041846 St13 protein_coding protein_coding MGP_129S1SvImJ_T0042089.1 MGP_129S1SvImJ_G0022190.1 mouse_genomes_project 15 86045065 86131537 + MGP_129S1SvImJ_P0042089 Fbln1 protein_coding protein_coding MGP_129S1SvImJ_T0042090.1 MGP_129S1SvImJ_G0022190.1 mouse_genomes_project 15 86045121 86092461 + MGP_129S1SvImJ_P0042090 Fbln1 protein_coding protein_coding MGP_129S1SvImJ_T0042091.1 MGP_129S1SvImJ_G0022190.1 mouse_genomes_project 15 86104005 86106024 + Fbln1 protein_coding processed_transcript MGP_129S1SvImJ_T0013085.1 MGP_129S1SvImJ_G0011174.1 mouse_genomes_project 15 35190546 35208810 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0042704.1 MGP_129S1SvImJ_G0022381.1 mouse_genomes_project 15 103724758 103734195 - MGP_129S1SvImJ_P0042704 Gm5414 protein_coding protein_coding MGP_129S1SvImJ_T0010105.1 MGP_129S1SvImJ_G0008221.1 mouse_genomes_project 15 90491558 90491633 - Mir6959 miRNA miRNA MGP_129S1SvImJ_T0042160.1 MGP_129S1SvImJ_G0022214.1 mouse_genomes_project 15 90222339 90235693 + MGP_129S1SvImJ_P0042160 Panx2 protein_coding protein_coding MGP_129S1SvImJ_T0042161.1 MGP_129S1SvImJ_G0022214.1 mouse_genomes_project 15 90222352 90236722 + MGP_129S1SvImJ_P0042161 Panx2 protein_coding protein_coding MGP_129S1SvImJ_T0042162.1 MGP_129S1SvImJ_G0022214.1 mouse_genomes_project 15 90235487 90239372 + MGP_129S1SvImJ_P0042162 Panx2 protein_coding protein_coding MGP_129S1SvImJ_T0042113.1 MGP_129S1SvImJ_G0022199.1 mouse_genomes_project 15 86808738 86825724 + MGP_129S1SvImJ_P0042113 Trmu protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042114.1 MGP_129S1SvImJ_G0022199.1 mouse_genomes_project 15 86808746 86830519 + MGP_129S1SvImJ_P0042114 Trmu protein_coding protein_coding MGP_129S1SvImJ_T0042115.1 MGP_129S1SvImJ_G0022199.1 mouse_genomes_project 15 86808807 86814060 + MGP_129S1SvImJ_P0042115 Trmu protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042116.1 MGP_129S1SvImJ_G0022199.1 mouse_genomes_project 15 86808840 86827080 + Trmu protein_coding retained_intron MGP_129S1SvImJ_T0042117.1 MGP_129S1SvImJ_G0022199.1 mouse_genomes_project 15 86816381 86829553 + MGP_129S1SvImJ_P0042117 Trmu protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042118.1 MGP_129S1SvImJ_G0022199.1 mouse_genomes_project 15 86825702 86827602 + Trmu protein_coding retained_intron MGP_129S1SvImJ_T0042119.1 MGP_129S1SvImJ_G0022199.1 mouse_genomes_project 15 86827332 86830519 + Trmu protein_coding processed_transcript MGP_129S1SvImJ_T0042120.1 MGP_129S1SvImJ_G0022199.1 mouse_genomes_project 15 86827876 86830186 + Trmu protein_coding retained_intron MGP_129S1SvImJ_T0042121.1 MGP_129S1SvImJ_G0022199.1 mouse_genomes_project 15 86828006 86830521 + Trmu protein_coding retained_intron MGP_129S1SvImJ_T0040982.1 MGP_129S1SvImJ_G0021860.1 mouse_genomes_project 15 56372234 56393830 - MGP_129S1SvImJ_P0040982 Slc22a22 protein_coding protein_coding MGP_129S1SvImJ_T0040983.1 MGP_129S1SvImJ_G0021860.1 mouse_genomes_project 15 56372238 56598419 - MGP_129S1SvImJ_P0040983 Slc22a22 protein_coding protein_coding MGP_129S1SvImJ_T0040984.1 MGP_129S1SvImJ_G0021860.1 mouse_genomes_project 15 56372499 56392338 - MGP_129S1SvImJ_P0040984 Slc22a22 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040985.1 MGP_129S1SvImJ_G0021860.1 mouse_genomes_project 15 56384455 56393806 - MGP_129S1SvImJ_P0040985 Slc22a22 protein_coding protein_coding MGP_129S1SvImJ_T0041045.1 MGP_129S1SvImJ_G0021889.1 mouse_genomes_project 15 60176209 60179891 - MGP_129S1SvImJ_P0041045 A1bg protein_coding protein_coding MGP_129S1SvImJ_T0041576.1 MGP_129S1SvImJ_G0022034.1 mouse_genomes_project 15 78106321 78118148 - MGP_129S1SvImJ_P0041576 Eif3d protein_coding protein_coding MGP_129S1SvImJ_T0042640.1 MGP_129S1SvImJ_G0022360.1 mouse_genomes_project 15 102678144 102715403 - MGP_129S1SvImJ_P0042640 Galnt6 protein_coding protein_coding MGP_129S1SvImJ_T0042641.1 MGP_129S1SvImJ_G0022360.1 mouse_genomes_project 15 102678146 102715403 - MGP_129S1SvImJ_P0042641 Galnt6 protein_coding protein_coding MGP_129S1SvImJ_T0042642.1 MGP_129S1SvImJ_G0022360.1 mouse_genomes_project 15 102679195 102706624 - MGP_129S1SvImJ_P0042642 Galnt6 protein_coding protein_coding MGP_129S1SvImJ_T0041941.1 MGP_129S1SvImJ_G0022135.1 mouse_genomes_project 15 82638528 82701334 + MGP_129S1SvImJ_P0041941 Srebf2 protein_coding protein_coding MGP_129S1SvImJ_T0000959.1 MGP_129S1SvImJ_G0000891.1 mouse_genomes_project 15 9880151 9882432 - TEC TEC MGP_129S1SvImJ_T0099437.1 MGP_129S1SvImJ_G0037504.1 mouse_genomes_project 15 9380906 9381015 - Gm25713 snRNA snRNA MGP_129S1SvImJ_T0042254.1 MGP_129S1SvImJ_G0022236.1 mouse_genomes_project 15 90625293 90626573 + MGP_129S1SvImJ_P0042254 C730034F03Rik protein_coding protein_coding MGP_129S1SvImJ_T0040874.1 MGP_129S1SvImJ_G0021817.1 mouse_genomes_project 15 38219248 38317864 - MGP_129S1SvImJ_P0040874 Dpys protein_coding protein_coding MGP_129S1SvImJ_T0040875.1 MGP_129S1SvImJ_G0021817.1 mouse_genomes_project 15 38233541 38317867 - MGP_129S1SvImJ_P0040875 Dpys protein_coding protein_coding MGP_129S1SvImJ_T0040876.1 MGP_129S1SvImJ_G0021817.1 mouse_genomes_project 15 38233548 38243938 - MGP_129S1SvImJ_P0040876 Dpys protein_coding protein_coding MGP_129S1SvImJ_T0040877.1 MGP_129S1SvImJ_G0021817.1 mouse_genomes_project 15 38316978 38317867 - Dpys protein_coding processed_transcript MGP_129S1SvImJ_T0003628.1 MGP_129S1SvImJ_G0003288.1 mouse_genomes_project 15 66259292 66264561 - Gm17140 antisense antisense MGP_129S1SvImJ_T0010119.1 MGP_129S1SvImJ_G0008235.1 mouse_genomes_project 15 105551923 105552020 + Mir148b miRNA miRNA MGP_129S1SvImJ_T0042018.1 MGP_129S1SvImJ_G0022165.1 mouse_genomes_project 15 84232748 84252437 + MGP_129S1SvImJ_P0042018 Bik protein_coding protein_coding MGP_129S1SvImJ_T0042670.1 MGP_129S1SvImJ_G0022363.1 mouse_genomes_project 15 103075114 103079328 - MGP_129S1SvImJ_P0042670 Fignl2 protein_coding protein_coding MGP_129S1SvImJ_T0042235.1 MGP_129S1SvImJ_G0022230.1 mouse_genomes_project 15 90563218 90568275 - MGP_129S1SvImJ_P0042235 Tymp protein_coding protein_coding MGP_129S1SvImJ_T0041230.1 MGP_129S1SvImJ_G0021943.1 mouse_genomes_project 15 74643465 74655559 - MGP_129S1SvImJ_P0041230 Cyp11b2 protein_coding protein_coding MGP_129S1SvImJ_T0041646.1 MGP_129S1SvImJ_G0022061.1 mouse_genomes_project 15 79285800 79292954 + MGP_129S1SvImJ_P0041646 Gcat protein_coding protein_coding MGP_129S1SvImJ_T0041647.1 MGP_129S1SvImJ_G0022061.1 mouse_genomes_project 15 79285800 79297127 + MGP_129S1SvImJ_P0041647 Gcat protein_coding protein_coding MGP_129S1SvImJ_T0041648.1 MGP_129S1SvImJ_G0022061.1 mouse_genomes_project 15 79296480 79298154 + MGP_129S1SvImJ_P0041648 Gcat protein_coding protein_coding MGP_129S1SvImJ_T0003626.1 MGP_129S1SvImJ_G0003286.1 mouse_genomes_project 15 65568250 65591339 + Gm27153 antisense antisense MGP_129S1SvImJ_T0041306.1 MGP_129S1SvImJ_G0021965.1 mouse_genomes_project 15 75965847 75971028 - MGP_129S1SvImJ_P0041306 Pycrl protein_coding protein_coding MGP_129S1SvImJ_T0040901.1 MGP_129S1SvImJ_G0021831.1 mouse_genomes_project 15 43075557 43223009 + MGP_129S1SvImJ_P0040901 Pkhd1l1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040902.1 MGP_129S1SvImJ_G0021831.1 mouse_genomes_project 15 43075557 43219070 + MGP_129S1SvImJ_P0040902 Pkhd1l1 protein_coding protein_coding MGP_129S1SvImJ_T0040903.1 MGP_129S1SvImJ_G0021831.1 mouse_genomes_project 15 43075557 43219076 + MGP_129S1SvImJ_P0040903 Pkhd1l1 protein_coding protein_coding MGP_129S1SvImJ_T0041976.1 MGP_129S1SvImJ_G0022157.1 mouse_genomes_project 15 83747575 83759988 + Serhl protein_coding processed_transcript MGP_129S1SvImJ_T0041977.1 MGP_129S1SvImJ_G0022157.1 mouse_genomes_project 15 83750943 83760218 + MGP_129S1SvImJ_P0041977 Serhl protein_coding protein_coding MGP_129S1SvImJ_T0041978.1 MGP_129S1SvImJ_G0022157.1 mouse_genomes_project 15 83755050 83761226 + Serhl protein_coding processed_transcript MGP_129S1SvImJ_T0041979.1 MGP_129S1SvImJ_G0022157.1 mouse_genomes_project 15 83758408 83780248 + MGP_129S1SvImJ_P0041979 Serhl protein_coding protein_coding MGP_129S1SvImJ_T0041980.1 MGP_129S1SvImJ_G0022157.1 mouse_genomes_project 15 83758417 83780245 + Serhl protein_coding retained_intron MGP_129S1SvImJ_T0041981.1 MGP_129S1SvImJ_G0022157.1 mouse_genomes_project 15 83758467 83761262 + Serhl protein_coding retained_intron MGP_129S1SvImJ_T0041982.1 MGP_129S1SvImJ_G0022157.1 mouse_genomes_project 15 83758493 83761287 + Serhl protein_coding retained_intron MGP_129S1SvImJ_T0041983.1 MGP_129S1SvImJ_G0022157.1 mouse_genomes_project 15 83758498 83760844 + MGP_129S1SvImJ_P0041983 Serhl protein_coding protein_coding MGP_129S1SvImJ_T0041984.1 MGP_129S1SvImJ_G0022157.1 mouse_genomes_project 15 83758498 83780248 + MGP_129S1SvImJ_P0041984 Serhl protein_coding protein_coding MGP_129S1SvImJ_T0041985.1 MGP_129S1SvImJ_G0022157.1 mouse_genomes_project 15 83758548 83779777 + MGP_129S1SvImJ_P0041985 Serhl protein_coding protein_coding MGP_129S1SvImJ_T0041986.1 MGP_129S1SvImJ_G0022157.1 mouse_genomes_project 15 83759785 83761422 + Serhl protein_coding retained_intron MGP_129S1SvImJ_T0041987.1 MGP_129S1SvImJ_G0022157.1 mouse_genomes_project 15 83761913 83779256 + Serhl protein_coding retained_intron MGP_129S1SvImJ_T0041988.1 MGP_129S1SvImJ_G0022157.1 mouse_genomes_project 15 83762135 83766559 + Serhl protein_coding retained_intron MGP_129S1SvImJ_T0041989.1 MGP_129S1SvImJ_G0022157.1 mouse_genomes_project 15 83762137 83764009 + Serhl protein_coding retained_intron MGP_129S1SvImJ_T0041990.1 MGP_129S1SvImJ_G0022157.1 mouse_genomes_project 15 83762577 83778002 + MGP_129S1SvImJ_P0041990 Serhl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041991.1 MGP_129S1SvImJ_G0022157.1 mouse_genomes_project 15 83764789 83779966 + Serhl protein_coding processed_transcript MGP_129S1SvImJ_T0041992.1 MGP_129S1SvImJ_G0022157.1 mouse_genomes_project 15 83776483 83780103 + Serhl protein_coding processed_transcript MGP_129S1SvImJ_T0041994.1 MGP_129S1SvImJ_G0022157.1 mouse_genomes_project 15 83779086 83780231 + Serhl protein_coding retained_intron MGP_129S1SvImJ_T0013099.1 MGP_129S1SvImJ_G0011188.1 mouse_genomes_project 15 53816058 53817040 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0041024.1 MGP_129S1SvImJ_G0021876.1 mouse_genomes_project 15 58051726 58052458 - MGP_129S1SvImJ_P0041024 Ube2d4 protein_coding protein_coding MGP_129S1SvImJ_T0042865.1 MGP_129S1SvImJ_G0022439.1 mouse_genomes_project 15 105583844 105609770 - MGP_129S1SvImJ_P0042865 Zfp385a protein_coding protein_coding MGP_129S1SvImJ_T0006765.1 MGP_129S1SvImJ_G0005591.1 mouse_genomes_project 15 36910273 36911593 + Gm26863 lincRNA lincRNA MGP_129S1SvImJ_T0098511.1 MGP_129S1SvImJ_G0036596.1 mouse_genomes_project 15 88209460 88209564 + n-R5s42 rRNA rRNA MGP_129S1SvImJ_T0010086.1 MGP_129S1SvImJ_G0008202.1 mouse_genomes_project 15 82935813 82935899 + Gm25990 miRNA miRNA MGP_129S1SvImJ_T0100721.1 MGP_129S1SvImJ_G0038788.1 mouse_genomes_project 15 3095710 3095842 - Gm23139 snoRNA snoRNA MGP_129S1SvImJ_T0042687.1 MGP_129S1SvImJ_G0022370.1 mouse_genomes_project 15 103404758 103427084 - MGP_129S1SvImJ_P0042687 Krt80 protein_coding protein_coding MGP_129S1SvImJ_T0042688.1 MGP_129S1SvImJ_G0022370.1 mouse_genomes_project 15 103405102 103425226 - MGP_129S1SvImJ_P0042688 Krt80 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040595.1 MGP_129S1SvImJ_G0021719.1 mouse_genomes_project 15 7450913 7498352 + MGP_129S1SvImJ_P0040595 Gm21973 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041993.1 MGP_129S1SvImJ_G0022158.1 mouse_genomes_project 15 83777034 83786383 - MGP_129S1SvImJ_P0041993 Rrp7a protein_coding protein_coding MGP_129S1SvImJ_T0041995.1 MGP_129S1SvImJ_G0022158.1 mouse_genomes_project 15 83779447 83781191 - MGP_129S1SvImJ_P0041995 Rrp7a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041996.1 MGP_129S1SvImJ_G0022158.1 mouse_genomes_project 15 83780800 83781919 - Rrp7a protein_coding retained_intron MGP_129S1SvImJ_T0041997.1 MGP_129S1SvImJ_G0022158.1 mouse_genomes_project 15 83782818 83785706 - MGP_129S1SvImJ_P0041997 Rrp7a protein_coding protein_coding MGP_129S1SvImJ_T0041998.1 MGP_129S1SvImJ_G0022158.1 mouse_genomes_project 15 83782844 83786333 - MGP_129S1SvImJ_P0041998 Rrp7a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042629.1 MGP_129S1SvImJ_G0022356.1 mouse_genomes_project 15 102596619 102603255 + MGP_129S1SvImJ_P0042629 Dazap2 protein_coding protein_coding MGP_129S1SvImJ_T0102263.1 MGP_129S1SvImJ_G0040097.1 mouse_genomes_project 15 75299156 75304409 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099035.1 MGP_129S1SvImJ_G0037106.1 mouse_genomes_project 15 57983992 57985482 - Gm20712 sense_overlapping sense_overlapping MGP_129S1SvImJ_T0099476.1 MGP_129S1SvImJ_G0037543.1 mouse_genomes_project 15 87172835 87172939 - Gm22818 snRNA snRNA MGP_129S1SvImJ_T0041944.1 MGP_129S1SvImJ_G0022138.1 mouse_genomes_project 15 82733769 82748113 - MGP_129S1SvImJ_P0041944 Cenpm protein_coding protein_coding MGP_129S1SvImJ_T0041945.1 MGP_129S1SvImJ_G0022138.1 mouse_genomes_project 15 82733769 82748113 - MGP_129S1SvImJ_P0041945 Cenpm protein_coding protein_coding MGP_129S1SvImJ_T0042718.1 MGP_129S1SvImJ_G0022394.1 mouse_genomes_project 15 104079004 104086881 - MGP_129S1SvImJ_P0042718 Krt78 protein_coding protein_coding MGP_129S1SvImJ_T0099036.1 MGP_129S1SvImJ_G0037107.1 mouse_genomes_project 15 90050824 90052557 - Gm20621 sense_overlapping sense_overlapping MGP_129S1SvImJ_T0099037.1 MGP_129S1SvImJ_G0037107.1 mouse_genomes_project 15 90051548 90052566 - Gm20621 sense_overlapping sense_overlapping MGP_129S1SvImJ_T0099038.1 MGP_129S1SvImJ_G0037107.1 mouse_genomes_project 15 90051553 90052524 - Gm20621 sense_overlapping sense_overlapping MGP_129S1SvImJ_T0042418.1 MGP_129S1SvImJ_G0022284.1 mouse_genomes_project 15 99728120 99784440 - MGP_129S1SvImJ_P0042418 Senp1 protein_coding protein_coding MGP_129S1SvImJ_T0042419.1 MGP_129S1SvImJ_G0022284.1 mouse_genomes_project 15 99730617 99754707 - Senp1 protein_coding retained_intron MGP_129S1SvImJ_T0042420.1 MGP_129S1SvImJ_G0022284.1 mouse_genomes_project 15 99730778 99785310 - MGP_129S1SvImJ_P0042420 Senp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042421.1 MGP_129S1SvImJ_G0022284.1 mouse_genomes_project 15 99731118 99784992 - MGP_129S1SvImJ_P0042421 Senp1 protein_coding protein_coding MGP_129S1SvImJ_T0042422.1 MGP_129S1SvImJ_G0022284.1 mouse_genomes_project 15 99732269 99738329 - Senp1 protein_coding processed_transcript MGP_129S1SvImJ_T0042423.1 MGP_129S1SvImJ_G0022284.1 mouse_genomes_project 15 99753573 99785111 - Senp1 protein_coding retained_intron MGP_129S1SvImJ_T0042424.1 MGP_129S1SvImJ_G0022284.1 mouse_genomes_project 15 99776789 99779292 - MGP_129S1SvImJ_P0042424 Senp1 protein_coding protein_coding MGP_129S1SvImJ_T0042425.1 MGP_129S1SvImJ_G0022284.1 mouse_genomes_project 15 99780304 99785046 - Senp1 protein_coding processed_transcript MGP_129S1SvImJ_T0042426.1 MGP_129S1SvImJ_G0022284.1 mouse_genomes_project 15 99780938 99784628 - Senp1 protein_coding processed_transcript MGP_129S1SvImJ_T0041884.1 MGP_129S1SvImJ_G0022119.1 mouse_genomes_project 15 82203570 82257476 + MGP_129S1SvImJ_P0041884 Zc3h7b protein_coding protein_coding MGP_129S1SvImJ_T0040482.1 MGP_129S1SvImJ_G0021693.1 mouse_genomes_project 15 2094081 2132977 + MGP_129S1SvImJ_P0040482 Ttc33 protein_coding protein_coding MGP_129S1SvImJ_T0040483.1 MGP_129S1SvImJ_G0021693.1 mouse_genomes_project 15 2094491 2129865 + MGP_129S1SvImJ_P0040483 Ttc33 protein_coding protein_coding MGP_129S1SvImJ_T0040484.1 MGP_129S1SvImJ_G0021693.1 mouse_genomes_project 15 2095683 2120432 + MGP_129S1SvImJ_P0040484 Ttc33 protein_coding protein_coding MGP_129S1SvImJ_T0041285.1 MGP_129S1SvImJ_G0021961.1 mouse_genomes_project 15 75931677 75936311 - MGP_129S1SvImJ_P0041285 Mroh6 protein_coding protein_coding MGP_129S1SvImJ_T0042699.1 MGP_129S1SvImJ_G0022376.1 mouse_genomes_project 15 103560560 103568735 - MGP_129S1SvImJ_P0042699 Krt83 protein_coding protein_coding MGP_129S1SvImJ_T0100757.1 MGP_129S1SvImJ_G0038824.1 mouse_genomes_project 15 80807098 80807235 - Gm23220 snoRNA snoRNA MGP_129S1SvImJ_T0041780.1 MGP_129S1SvImJ_G0022092.1 mouse_genomes_project 15 80384387 80390656 - Rpl3 protein_coding retained_intron MGP_129S1SvImJ_T0041781.1 MGP_129S1SvImJ_G0022092.1 mouse_genomes_project 15 80384387 80391426 - Rpl3 protein_coding retained_intron MGP_129S1SvImJ_T0041782.1 MGP_129S1SvImJ_G0022092.1 mouse_genomes_project 15 80384387 80391426 - MGP_129S1SvImJ_P0041782 Rpl3 protein_coding protein_coding MGP_129S1SvImJ_T0041783.1 MGP_129S1SvImJ_G0022092.1 mouse_genomes_project 15 80386975 80391406 - MGP_129S1SvImJ_P0041783 Rpl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041784.1 MGP_129S1SvImJ_G0022092.1 mouse_genomes_project 15 80387460 80400809 - MGP_129S1SvImJ_P0041784 Rpl3 protein_coding protein_coding MGP_129S1SvImJ_T0041785.1 MGP_129S1SvImJ_G0022092.1 mouse_genomes_project 15 80388547 80391410 - Rpl3 protein_coding retained_intron MGP_129S1SvImJ_T0041805.1 MGP_129S1SvImJ_G0022103.1 mouse_genomes_project 15 81080749 81331540 + MGP_129S1SvImJ_P0041805 Tnrc6b protein_coding protein_coding MGP_129S1SvImJ_T0041806.1 MGP_129S1SvImJ_G0022103.1 mouse_genomes_project 15 81080802 81319159 + MGP_129S1SvImJ_P0041806 Tnrc6b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0013119.1 MGP_129S1SvImJ_G0011208.1 mouse_genomes_project 15 85951559 85951977 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0041733.1 MGP_129S1SvImJ_G0022083.1 mouse_genomes_project 15 79991536 80015732 + MGP_129S1SvImJ_P0041733 Gtpbp1 protein_coding protein_coding MGP_129S1SvImJ_T0040481.1 MGP_129S1SvImJ_G0021692.1 mouse_genomes_project 15 2049346 2089996 + MGP_129S1SvImJ_P0040481 Prkaa1 protein_coding protein_coding MGP_129S1SvImJ_T0042837.1 MGP_129S1SvImJ_G0022429.1 mouse_genomes_project 15 105211968 105217200 + MGP_129S1SvImJ_P0042837 Hoxc9 protein_coding protein_coding MGP_129S1SvImJ_T0042838.1 MGP_129S1SvImJ_G0022429.1 mouse_genomes_project 15 105212561 105220526 + MGP_129S1SvImJ_P0042838 Hoxc9 protein_coding protein_coding MGP_129S1SvImJ_T0041824.1 MGP_129S1SvImJ_G0022106.1 mouse_genomes_project 15 81402254 81413148 + MGP_129S1SvImJ_P0041824 Sgsm3 protein_coding protein_coding MGP_129S1SvImJ_T0041743.1 MGP_129S1SvImJ_G0022085.1 mouse_genomes_project 15 80057552 80072271 - MGP_129S1SvImJ_P0041743 Dnal4 protein_coding protein_coding MGP_129S1SvImJ_T0041744.1 MGP_129S1SvImJ_G0022085.1 mouse_genomes_project 15 80057555 80072355 - MGP_129S1SvImJ_P0041744 Dnal4 protein_coding protein_coding MGP_129S1SvImJ_T0041745.1 MGP_129S1SvImJ_G0022085.1 mouse_genomes_project 15 80061085 80074860 - Dnal4 protein_coding processed_transcript MGP_129S1SvImJ_T0041746.1 MGP_129S1SvImJ_G0022085.1 mouse_genomes_project 15 80072459 80075737 - Dnal4 protein_coding processed_transcript MGP_129S1SvImJ_T0041180.1 MGP_129S1SvImJ_G0021924.1 mouse_genomes_project 15 73478804 73519609 + MGP_129S1SvImJ_P0041180 Ptp4a3 protein_coding protein_coding MGP_129S1SvImJ_T0041181.1 MGP_129S1SvImJ_G0021924.1 mouse_genomes_project 15 73478804 73519609 + MGP_129S1SvImJ_P0041181 Ptp4a3 protein_coding protein_coding MGP_129S1SvImJ_T0041182.1 MGP_129S1SvImJ_G0021924.1 mouse_genomes_project 15 73483279 73519609 + MGP_129S1SvImJ_P0041182 Ptp4a3 protein_coding protein_coding MGP_129S1SvImJ_T0041183.1 MGP_129S1SvImJ_G0021924.1 mouse_genomes_project 15 73508839 73519609 + MGP_129S1SvImJ_P0041183 Ptp4a3 protein_coding protein_coding MGP_129S1SvImJ_T0013111.1 MGP_129S1SvImJ_G0011200.1 mouse_genomes_project 15 76904041 76904396 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011401.1 MGP_129S1SvImJ_G0009517.1 mouse_genomes_project 15 3475068 3475344 + Gm23218 misc_RNA misc_RNA MGP_129S1SvImJ_T0041950.1 MGP_129S1SvImJ_G0022141.1 mouse_genomes_project 15 82811642 82828190 + MGP_129S1SvImJ_P0041950 Wbp2nl protein_coding protein_coding MGP_129S1SvImJ_T0100732.1 MGP_129S1SvImJ_G0038799.1 mouse_genomes_project 15 29401820 29401954 - Gm26416 snoRNA snoRNA MGP_129S1SvImJ_T0099441.1 MGP_129S1SvImJ_G0037508.1 mouse_genomes_project 15 22787023 22787180 - Gm22810 snRNA snRNA MGP_129S1SvImJ_T0042684.1 MGP_129S1SvImJ_G0022367.1 mouse_genomes_project 15 103272612 103280968 + MGP_129S1SvImJ_P0042684 Grasp protein_coding protein_coding MGP_129S1SvImJ_T0013076.1 MGP_129S1SvImJ_G0011165.1 mouse_genomes_project 15 9253164 9253647 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0041046.1 MGP_129S1SvImJ_G0021890.1 mouse_genomes_project 15 61322401 61329649 + MGP_129S1SvImJ_P0041046 Myc protein_coding protein_coding MGP_129S1SvImJ_T0041047.1 MGP_129S1SvImJ_G0021890.1 mouse_genomes_project 15 61322451 61329647 + MGP_129S1SvImJ_P0041047 Myc protein_coding protein_coding MGP_129S1SvImJ_T0041048.1 MGP_129S1SvImJ_G0021890.1 mouse_genomes_project 15 61322624 61329671 + MGP_129S1SvImJ_P0041048 Myc protein_coding protein_coding MGP_129S1SvImJ_T0041049.1 MGP_129S1SvImJ_G0021890.1 mouse_genomes_project 15 61322682 61329364 + MGP_129S1SvImJ_P0041049 Myc protein_coding protein_coding MGP_129S1SvImJ_T0041050.1 MGP_129S1SvImJ_G0021890.1 mouse_genomes_project 15 61322982 61329205 + MGP_129S1SvImJ_P0041050 Myc protein_coding protein_coding MGP_129S1SvImJ_T0041051.1 MGP_129S1SvImJ_G0021890.1 mouse_genomes_project 15 61324094 61324678 + MGP_129S1SvImJ_P0041051 Myc protein_coding protein_coding MGP_129S1SvImJ_T0041052.1 MGP_129S1SvImJ_G0021890.1 mouse_genomes_project 15 61324482 61329550 + MGP_129S1SvImJ_P0041052 Myc protein_coding protein_coding MGP_129S1SvImJ_T0006796.1 MGP_129S1SvImJ_G0005610.1 mouse_genomes_project 15 82261997 82263816 - Gm17597 lincRNA lincRNA MGP_129S1SvImJ_T0042880.1 MGP_129S1SvImJ_G0022446.1 mouse_genomes_project 15 105841569 105843886 - MGP_129S1SvImJ_P0042880 Glycam1 protein_coding protein_coding MGP_129S1SvImJ_T0040863.1 MGP_129S1SvImJ_G0021812.1 mouse_genomes_project 15 37496405 37506722 + MGP_129S1SvImJ_P0040863 Cthrc1 protein_coding protein_coding MGP_129S1SvImJ_T0040864.1 MGP_129S1SvImJ_G0021812.1 mouse_genomes_project 15 37496551 37501103 + Cthrc1 protein_coding processed_transcript MGP_129S1SvImJ_T0040865.1 MGP_129S1SvImJ_G0021812.1 mouse_genomes_project 15 37503585 37506724 + Cthrc1 protein_coding retained_intron MGP_129S1SvImJ_T0041588.1 MGP_129S1SvImJ_G0022040.1 mouse_genomes_project 15 78569417 78580214 - MGP_129S1SvImJ_P0041588 Tex33 protein_coding protein_coding MGP_129S1SvImJ_T0041589.1 MGP_129S1SvImJ_G0022040.1 mouse_genomes_project 15 78569417 78587335 - MGP_129S1SvImJ_P0041589 Tex33 protein_coding protein_coding MGP_129S1SvImJ_T0041590.1 MGP_129S1SvImJ_G0022040.1 mouse_genomes_project 15 78569417 78587335 - MGP_129S1SvImJ_P0041590 Tex33 protein_coding protein_coding MGP_129S1SvImJ_T0017467.1 MGP_129S1SvImJ_G0015289.1 mouse_genomes_project 15 887559 891939 - BC037032 processed_transcript TEC MGP_129S1SvImJ_T0017468.1 MGP_129S1SvImJ_G0015289.1 mouse_genomes_project 15 889131 894837 - BC037032 processed_transcript antisense MGP_129S1SvImJ_T0017469.1 MGP_129S1SvImJ_G0015289.1 mouse_genomes_project 15 889816 894846 - BC037032 processed_transcript antisense MGP_129S1SvImJ_T0017470.1 MGP_129S1SvImJ_G0015289.1 mouse_genomes_project 15 890420 894849 - BC037032 processed_transcript antisense MGP_129S1SvImJ_T0017471.1 MGP_129S1SvImJ_G0015289.1 mouse_genomes_project 15 891016 893524 - BC037032 processed_transcript antisense MGP_129S1SvImJ_T0017472.1 MGP_129S1SvImJ_G0015289.1 mouse_genomes_project 15 893844 894596 - BC037032 processed_transcript antisense MGP_129S1SvImJ_T0003631.1 MGP_129S1SvImJ_G0003291.1 mouse_genomes_project 15 74491826 74493039 + 4933427E11Rik antisense antisense MGP_129S1SvImJ_T0003632.1 MGP_129S1SvImJ_G0003291.1 mouse_genomes_project 15 74491826 74493037 + 4933427E11Rik antisense antisense MGP_129S1SvImJ_T0099486.1 MGP_129S1SvImJ_G0037553.1 mouse_genomes_project 15 104549830 104549934 + Gm23590 snRNA snRNA MGP_129S1SvImJ_T0017510.1 MGP_129S1SvImJ_G0015308.1 mouse_genomes_project 15 90727902 90731484 - Gm15609 processed_transcript processed_transcript MGP_129S1SvImJ_T0042864.1 MGP_129S1SvImJ_G0022438.1 mouse_genomes_project 15 105574939 105579013 - MGP_129S1SvImJ_P0042864 Gpr84 protein_coding protein_coding MGP_129S1SvImJ_T0041147.1 MGP_129S1SvImJ_G0021913.1 mouse_genomes_project 15 68503768 68684662 + MGP_129S1SvImJ_P0041147 Khdrbs3 protein_coding protein_coding MGP_129S1SvImJ_T0042049.1 MGP_129S1SvImJ_G0022174.1 mouse_genomes_project 15 84926215 84951525 + MGP_129S1SvImJ_P0042049 Pnpla3 protein_coding protein_coding MGP_129S1SvImJ_T0042050.1 MGP_129S1SvImJ_G0022174.1 mouse_genomes_project 15 84932066 84949806 + MGP_129S1SvImJ_P0042050 Pnpla3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0003654.1 MGP_129S1SvImJ_G0003307.1 mouse_genomes_project 15 100325955 100327054 + Gm29331 antisense antisense MGP_129S1SvImJ_T0099446.1 MGP_129S1SvImJ_G0037513.1 mouse_genomes_project 15 36064827 36064947 - Gm24833 snRNA snRNA MGP_129S1SvImJ_T0003644.1 MGP_129S1SvImJ_G0003299.1 mouse_genomes_project 15 83760292 83764144 - Gm17206 antisense antisense MGP_129S1SvImJ_T0041053.1 MGP_129S1SvImJ_G0021891.1 mouse_genomes_project 15 63208112 63238779 - MGP_129S1SvImJ_P0041053 Gsdmc protein_coding protein_coding MGP_129S1SvImJ_T0041054.1 MGP_129S1SvImJ_G0021891.1 mouse_genomes_project 15 63210399 63234436 - MGP_129S1SvImJ_P0041054 Gsdmc protein_coding protein_coding MGP_129S1SvImJ_T0102262.1 MGP_129S1SvImJ_G0040096.1 mouse_genomes_project 15 75266962 75269138 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0042630.1 MGP_129S1SvImJ_G0022357.1 mouse_genomes_project 15 102603865 102621445 - MGP_129S1SvImJ_P0042630 Smagp protein_coding protein_coding MGP_129S1SvImJ_T0042631.1 MGP_129S1SvImJ_G0022357.1 mouse_genomes_project 15 102603865 102621435 - MGP_129S1SvImJ_P0042631 Smagp protein_coding protein_coding MGP_129S1SvImJ_T0041258.1 MGP_129S1SvImJ_G0021952.1 mouse_genomes_project 15 75385343 75529805 + MGP_129S1SvImJ_P0041258 Ly6l protein_coding protein_coding MGP_129S1SvImJ_T0099481.1 MGP_129S1SvImJ_G0037548.1 mouse_genomes_project 15 97125368 97125472 - Gm24668 snRNA snRNA MGP_129S1SvImJ_T0042708.1 MGP_129S1SvImJ_G0022385.1 mouse_genomes_project 15 103882142 103890411 - MGP_129S1SvImJ_P0042708 Krt74 protein_coding protein_coding MGP_129S1SvImJ_T0042093.1 MGP_129S1SvImJ_G0022192.1 mouse_genomes_project 15 86361576 86378043 - MGP_129S1SvImJ_P0042093 7530416G11Rik protein_coding protein_coding MGP_129S1SvImJ_T0041372.1 MGP_129S1SvImJ_G0021982.1 mouse_genomes_project 15 76365883 76376393 - MGP_129S1SvImJ_P0041372 Oplah protein_coding protein_coding MGP_129S1SvImJ_T0041373.1 MGP_129S1SvImJ_G0021982.1 mouse_genomes_project 15 76365889 76366779 - Oplah protein_coding retained_intron MGP_129S1SvImJ_T0041374.1 MGP_129S1SvImJ_G0021982.1 mouse_genomes_project 15 76365889 76376537 - MGP_129S1SvImJ_P0041374 Oplah protein_coding protein_coding MGP_129S1SvImJ_T0041375.1 MGP_129S1SvImJ_G0021982.1 mouse_genomes_project 15 76366629 76367327 - Oplah protein_coding retained_intron MGP_129S1SvImJ_T0041376.1 MGP_129S1SvImJ_G0021982.1 mouse_genomes_project 15 76369873 76370402 - Oplah protein_coding retained_intron MGP_129S1SvImJ_T0041377.1 MGP_129S1SvImJ_G0021982.1 mouse_genomes_project 15 76370162 76371649 - Oplah protein_coding retained_intron MGP_129S1SvImJ_T0041378.1 MGP_129S1SvImJ_G0021982.1 mouse_genomes_project 15 76370240 76376681 - MGP_129S1SvImJ_P0041378 Oplah protein_coding protein_coding MGP_129S1SvImJ_T0041379.1 MGP_129S1SvImJ_G0021982.1 mouse_genomes_project 15 76371350 76372487 - Oplah protein_coding processed_transcript MGP_129S1SvImJ_T0041380.1 MGP_129S1SvImJ_G0021982.1 mouse_genomes_project 15 76375778 76397239 - MGP_129S1SvImJ_P0041380 Oplah protein_coding protein_coding MGP_129S1SvImJ_T0042490.1 MGP_129S1SvImJ_G0022314.1 mouse_genomes_project 15 100595295 100635236 - MGP_129S1SvImJ_P0042490 Kmt2d protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042491.1 MGP_129S1SvImJ_G0022314.1 mouse_genomes_project 15 100595296 100634876 - MGP_129S1SvImJ_P0042491 Kmt2d protein_coding protein_coding MGP_129S1SvImJ_T0042492.1 MGP_129S1SvImJ_G0022314.1 mouse_genomes_project 15 100595299 100634894 - MGP_129S1SvImJ_P0042492 Kmt2d protein_coding protein_coding MGP_129S1SvImJ_T0042493.1 MGP_129S1SvImJ_G0022314.1 mouse_genomes_project 15 100597922 100600743 - MGP_129S1SvImJ_P0042493 Kmt2d protein_coding protein_coding MGP_129S1SvImJ_T0042494.1 MGP_129S1SvImJ_G0022314.1 mouse_genomes_project 15 100618391 100619987 - MGP_129S1SvImJ_P0042494 Kmt2d protein_coding protein_coding MGP_129S1SvImJ_T0011417.1 MGP_129S1SvImJ_G0009533.1 mouse_genomes_project 15 99616620 99616931 + Gm22202 misc_RNA misc_RNA MGP_129S1SvImJ_T0006766.1 MGP_129S1SvImJ_G0005592.1 mouse_genomes_project 15 37074551 37124661 - 2310043O21Rik lincRNA lincRNA MGP_129S1SvImJ_T0041595.1 MGP_129S1SvImJ_G0022043.1 mouse_genomes_project 15 78624009 78633959 + MGP_129S1SvImJ_P0041595 Kctd17 protein_coding protein_coding MGP_129S1SvImJ_T0041596.1 MGP_129S1SvImJ_G0022043.1 mouse_genomes_project 15 78624009 78633959 + MGP_129S1SvImJ_P0041596 Kctd17 protein_coding protein_coding MGP_129S1SvImJ_T0041597.1 MGP_129S1SvImJ_G0022043.1 mouse_genomes_project 15 78624073 78634371 + MGP_129S1SvImJ_P0041597 Kctd17 protein_coding protein_coding MGP_129S1SvImJ_T0041598.1 MGP_129S1SvImJ_G0022043.1 mouse_genomes_project 15 78624107 78634305 + MGP_129S1SvImJ_P0041598 Kctd17 protein_coding protein_coding MGP_129S1SvImJ_T0041599.1 MGP_129S1SvImJ_G0022043.1 mouse_genomes_project 15 78624136 78631322 + Kctd17 protein_coding retained_intron MGP_129S1SvImJ_T0041600.1 MGP_129S1SvImJ_G0022043.1 mouse_genomes_project 15 78624241 78634109 + MGP_129S1SvImJ_P0041600 Kctd17 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041601.1 MGP_129S1SvImJ_G0022043.1 mouse_genomes_project 15 78625547 78634042 + MGP_129S1SvImJ_P0041601 Kctd17 protein_coding protein_coding MGP_129S1SvImJ_T0041602.1 MGP_129S1SvImJ_G0022043.1 mouse_genomes_project 15 78628448 78633196 + Kctd17 protein_coding retained_intron MGP_129S1SvImJ_T0041603.1 MGP_129S1SvImJ_G0022043.1 mouse_genomes_project 15 78629443 78633041 + Kctd17 protein_coding retained_intron MGP_129S1SvImJ_T0042767.1 MGP_129S1SvImJ_G0022411.1 mouse_genomes_project 15 104530801 104540521 - MGP_129S1SvImJ_P0042767 Sp7 protein_coding protein_coding MGP_129S1SvImJ_T0017473.1 MGP_129S1SvImJ_G0015290.1 mouse_genomes_project 15 4409758 4426448 + Gm16029 processed_transcript processed_transcript MGP_129S1SvImJ_T0010115.1 MGP_129S1SvImJ_G0008231.1 mouse_genomes_project 15 104023308 104023419 + Gm44356 miRNA miRNA MGP_129S1SvImJ_T0042649.1 MGP_129S1SvImJ_G0022362.1 mouse_genomes_project 15 102871829 102947975 + MGP_129S1SvImJ_P0042649 Scn8a protein_coding protein_coding MGP_129S1SvImJ_T0042650.1 MGP_129S1SvImJ_G0022362.1 mouse_genomes_project 15 102871829 102947975 + MGP_129S1SvImJ_P0042650 Scn8a protein_coding protein_coding MGP_129S1SvImJ_T0042651.1 MGP_129S1SvImJ_G0022362.1 mouse_genomes_project 15 102872616 103034666 + MGP_129S1SvImJ_P0042651 Scn8a protein_coding protein_coding MGP_129S1SvImJ_T0042652.1 MGP_129S1SvImJ_G0022362.1 mouse_genomes_project 15 102872632 102947975 + MGP_129S1SvImJ_P0042652 Scn8a protein_coding protein_coding MGP_129S1SvImJ_T0042653.1 MGP_129S1SvImJ_G0022362.1 mouse_genomes_project 15 102872654 103069539 + MGP_129S1SvImJ_P0042653 Scn8a protein_coding protein_coding MGP_129S1SvImJ_T0042654.1 MGP_129S1SvImJ_G0022362.1 mouse_genomes_project 15 102872749 103069548 + MGP_129S1SvImJ_P0042654 Scn8a protein_coding protein_coding MGP_129S1SvImJ_T0042655.1 MGP_129S1SvImJ_G0022362.1 mouse_genomes_project 15 102872790 103065304 + MGP_129S1SvImJ_P0042655 Scn8a protein_coding protein_coding MGP_129S1SvImJ_T0042656.1 MGP_129S1SvImJ_G0022362.1 mouse_genomes_project 15 102872797 103065221 + MGP_129S1SvImJ_P0042656 Scn8a protein_coding protein_coding MGP_129S1SvImJ_T0042657.1 MGP_129S1SvImJ_G0022362.1 mouse_genomes_project 15 102873265 102947975 + MGP_129S1SvImJ_P0042657 Scn8a protein_coding protein_coding MGP_129S1SvImJ_T0042658.1 MGP_129S1SvImJ_G0022362.1 mouse_genomes_project 15 102945070 102953555 + MGP_129S1SvImJ_P0042658 Scn8a protein_coding protein_coding MGP_129S1SvImJ_T0042659.1 MGP_129S1SvImJ_G0022362.1 mouse_genomes_project 15 102947918 103069539 + MGP_129S1SvImJ_P0042659 Scn8a protein_coding protein_coding MGP_129S1SvImJ_T0042660.1 MGP_129S1SvImJ_G0022362.1 mouse_genomes_project 15 102947953 102953178 + MGP_129S1SvImJ_P0042660 Scn8a protein_coding protein_coding MGP_129S1SvImJ_T0042661.1 MGP_129S1SvImJ_G0022362.1 mouse_genomes_project 15 102947972 103064296 + MGP_129S1SvImJ_P0042661 Scn8a protein_coding protein_coding MGP_129S1SvImJ_T0042662.1 MGP_129S1SvImJ_G0022362.1 mouse_genomes_project 15 102970909 102976766 + MGP_129S1SvImJ_P0042662 Scn8a protein_coding protein_coding MGP_129S1SvImJ_T0042663.1 MGP_129S1SvImJ_G0022362.1 mouse_genomes_project 15 102972321 102975089 + Scn8a protein_coding retained_intron MGP_129S1SvImJ_T0042664.1 MGP_129S1SvImJ_G0022362.1 mouse_genomes_project 15 102972356 102974936 + Scn8a protein_coding retained_intron MGP_129S1SvImJ_T0042665.1 MGP_129S1SvImJ_G0022362.1 mouse_genomes_project 15 102972449 103069532 + MGP_129S1SvImJ_P0042665 Scn8a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042666.1 MGP_129S1SvImJ_G0022362.1 mouse_genomes_project 15 102972485 103024414 + MGP_129S1SvImJ_P0042666 Scn8a protein_coding protein_coding MGP_129S1SvImJ_T0042667.1 MGP_129S1SvImJ_G0022362.1 mouse_genomes_project 15 102985127 102986768 + Scn8a protein_coding retained_intron MGP_129S1SvImJ_T0042668.1 MGP_129S1SvImJ_G0022362.1 mouse_genomes_project 15 102986652 102992370 + Scn8a protein_coding retained_intron MGP_129S1SvImJ_T0042669.1 MGP_129S1SvImJ_G0022362.1 mouse_genomes_project 15 103039506 103053341 + Scn8a protein_coding processed_transcript MGP_129S1SvImJ_T0041233.1 MGP_129S1SvImJ_G0021945.1 mouse_genomes_project 15 74772379 74777234 + MGP_129S1SvImJ_P0041233 Ly6e protein_coding protein_coding MGP_129S1SvImJ_T0041234.1 MGP_129S1SvImJ_G0021945.1 mouse_genomes_project 15 74772379 74777232 + MGP_129S1SvImJ_P0041234 Ly6e protein_coding protein_coding MGP_129S1SvImJ_T0041235.1 MGP_129S1SvImJ_G0021945.1 mouse_genomes_project 15 74772399 74777234 + MGP_129S1SvImJ_P0041235 Ly6e protein_coding protein_coding MGP_129S1SvImJ_T0041236.1 MGP_129S1SvImJ_G0021945.1 mouse_genomes_project 15 74772434 74776105 + MGP_129S1SvImJ_P0041236 Ly6e protein_coding protein_coding MGP_129S1SvImJ_T0041237.1 MGP_129S1SvImJ_G0021945.1 mouse_genomes_project 15 74772470 74775718 + MGP_129S1SvImJ_P0041237 Ly6e protein_coding protein_coding MGP_129S1SvImJ_T0041238.1 MGP_129S1SvImJ_G0021945.1 mouse_genomes_project 15 74772492 74776085 + MGP_129S1SvImJ_P0041238 Ly6e protein_coding protein_coding MGP_129S1SvImJ_T0041239.1 MGP_129S1SvImJ_G0021945.1 mouse_genomes_project 15 74772506 74775984 + MGP_129S1SvImJ_P0041239 Ly6e protein_coding protein_coding MGP_129S1SvImJ_T0041240.1 MGP_129S1SvImJ_G0021945.1 mouse_genomes_project 15 74772514 74776056 + MGP_129S1SvImJ_P0041240 Ly6e protein_coding protein_coding MGP_129S1SvImJ_T0041241.1 MGP_129S1SvImJ_G0021945.1 mouse_genomes_project 15 74772569 74775922 + MGP_129S1SvImJ_P0041241 Ly6e protein_coding protein_coding MGP_129S1SvImJ_T0041242.1 MGP_129S1SvImJ_G0021945.1 mouse_genomes_project 15 74772588 74775989 + MGP_129S1SvImJ_P0041242 Ly6e protein_coding protein_coding MGP_129S1SvImJ_T0041243.1 MGP_129S1SvImJ_G0021945.1 mouse_genomes_project 15 74772981 74776660 + MGP_129S1SvImJ_P0041243 Ly6e protein_coding protein_coding MGP_129S1SvImJ_T0041244.1 MGP_129S1SvImJ_G0021945.1 mouse_genomes_project 15 74772994 74776358 + Ly6e protein_coding retained_intron MGP_129S1SvImJ_T0041245.1 MGP_129S1SvImJ_G0021945.1 mouse_genomes_project 15 74772996 74776660 + Ly6e protein_coding retained_intron MGP_129S1SvImJ_T0041246.1 MGP_129S1SvImJ_G0021945.1 mouse_genomes_project 15 74773000 74775939 + MGP_129S1SvImJ_P0041246 Ly6e protein_coding protein_coding MGP_129S1SvImJ_T0041247.1 MGP_129S1SvImJ_G0021945.1 mouse_genomes_project 15 74773011 74773826 + Ly6e protein_coding retained_intron MGP_129S1SvImJ_T0041248.1 MGP_129S1SvImJ_G0021945.1 mouse_genomes_project 15 74773883 74776155 + MGP_129S1SvImJ_P0041248 Ly6e protein_coding protein_coding MGP_129S1SvImJ_T0042172.1 MGP_129S1SvImJ_G0022217.1 mouse_genomes_project 15 90264147 90295128 - MGP_129S1SvImJ_P0042172 Tubgcp6 protein_coding protein_coding MGP_129S1SvImJ_T0042173.1 MGP_129S1SvImJ_G0022217.1 mouse_genomes_project 15 90264888 90266889 - Tubgcp6 protein_coding retained_intron MGP_129S1SvImJ_T0042174.1 MGP_129S1SvImJ_G0022217.1 mouse_genomes_project 15 90266200 90294927 - MGP_129S1SvImJ_P0042174 Tubgcp6 protein_coding protein_coding MGP_129S1SvImJ_T0042175.1 MGP_129S1SvImJ_G0022217.1 mouse_genomes_project 15 90266200 90268394 - MGP_129S1SvImJ_P0042175 Tubgcp6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042176.1 MGP_129S1SvImJ_G0022217.1 mouse_genomes_project 15 90266224 90267334 - Tubgcp6 protein_coding retained_intron MGP_129S1SvImJ_T0042177.1 MGP_129S1SvImJ_G0022217.1 mouse_genomes_project 15 90266483 90267070 - Tubgcp6 protein_coding retained_intron MGP_129S1SvImJ_T0042178.1 MGP_129S1SvImJ_G0022217.1 mouse_genomes_project 15 90266507 90267805 - MGP_129S1SvImJ_P0042178 Tubgcp6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042179.1 MGP_129S1SvImJ_G0022217.1 mouse_genomes_project 15 90266802 90267971 - Tubgcp6 protein_coding retained_intron MGP_129S1SvImJ_T0042180.1 MGP_129S1SvImJ_G0022217.1 mouse_genomes_project 15 90267266 90268163 - MGP_129S1SvImJ_P0042180 Tubgcp6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042181.1 MGP_129S1SvImJ_G0022217.1 mouse_genomes_project 15 90270006 90273220 - MGP_129S1SvImJ_P0042181 Tubgcp6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0003653.1 MGP_129S1SvImJ_G0003306.1 mouse_genomes_project 15 100303676 100305936 + 9330020H09Rik antisense antisense MGP_129S1SvImJ_T0003646.1 MGP_129S1SvImJ_G0003301.1 mouse_genomes_project 15 87144918 87146343 + Gm15569 antisense antisense MGP_129S1SvImJ_T0006805.1 MGP_129S1SvImJ_G0005615.1 mouse_genomes_project 15 86528988 86535167 + D130051D11Rik lincRNA lincRNA MGP_129S1SvImJ_T0042392.1 MGP_129S1SvImJ_G0022279.1 mouse_genomes_project 15 99457129 99465472 + MGP_129S1SvImJ_P0042392 Slc48a1 protein_coding protein_coding MGP_129S1SvImJ_T0042393.1 MGP_129S1SvImJ_G0022279.1 mouse_genomes_project 15 99457202 99462738 + MGP_129S1SvImJ_P0042393 Slc48a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041618.1 MGP_129S1SvImJ_G0022052.1 mouse_genomes_project 15 78990025 79019131 - MGP_129S1SvImJ_P0041618 Card10 protein_coding protein_coding MGP_129S1SvImJ_T0041619.1 MGP_129S1SvImJ_G0022052.1 mouse_genomes_project 15 78990896 79018758 - MGP_129S1SvImJ_P0041619 Card10 protein_coding protein_coding MGP_129S1SvImJ_T0041620.1 MGP_129S1SvImJ_G0022052.1 mouse_genomes_project 15 79003568 79006648 - Card10 protein_coding processed_transcript MGP_129S1SvImJ_T0041271.1 MGP_129S1SvImJ_G0021955.1 mouse_genomes_project 15 75639365 75648019 + MGP_129S1SvImJ_P0041271 Zfp41 protein_coding protein_coding MGP_129S1SvImJ_T0041272.1 MGP_129S1SvImJ_G0021955.1 mouse_genomes_project 15 75639370 75648012 + MGP_129S1SvImJ_P0041272 Zfp41 protein_coding protein_coding MGP_129S1SvImJ_T0041273.1 MGP_129S1SvImJ_G0021955.1 mouse_genomes_project 15 75639412 75641363 + MGP_129S1SvImJ_P0041273 Zfp41 protein_coding protein_coding MGP_129S1SvImJ_T0041274.1 MGP_129S1SvImJ_G0021955.1 mouse_genomes_project 15 75644429 75646549 + Zfp41 protein_coding processed_transcript MGP_129S1SvImJ_T0013097.1 MGP_129S1SvImJ_G0011186.1 mouse_genomes_project 15 53075947 53077424 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099473.1 MGP_129S1SvImJ_G0037540.1 mouse_genomes_project 15 82039581 82039688 + Gm22067 snRNA snRNA MGP_129S1SvImJ_T0040683.1 MGP_129S1SvImJ_G0021747.1 mouse_genomes_project 15 23119323 23131274 - MGP_129S1SvImJ_P0040683 9230109A22Rik protein_coding protein_coding MGP_129S1SvImJ_T0041687.1 MGP_129S1SvImJ_G0022070.1 mouse_genomes_project 15 79515030 79542279 - MGP_129S1SvImJ_P0041687 Baiap2l2 protein_coding protein_coding MGP_129S1SvImJ_T0041688.1 MGP_129S1SvImJ_G0022070.1 mouse_genomes_project 15 79515031 79542184 - MGP_129S1SvImJ_P0041688 Baiap2l2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041689.1 MGP_129S1SvImJ_G0022070.1 mouse_genomes_project 15 79515167 79516168 - Baiap2l2 protein_coding processed_transcript MGP_129S1SvImJ_T0041690.1 MGP_129S1SvImJ_G0022070.1 mouse_genomes_project 15 79516530 79518105 - Baiap2l2 protein_coding processed_transcript MGP_129S1SvImJ_T0041691.1 MGP_129S1SvImJ_G0022070.1 mouse_genomes_project 15 79526980 79542235 - MGP_129S1SvImJ_P0041691 Baiap2l2 protein_coding protein_coding MGP_129S1SvImJ_T0040714.1 MGP_129S1SvImJ_G0021760.1 mouse_genomes_project 15 26297576 26573891 + MGP_129S1SvImJ_P0040714 Dnah5 protein_coding protein_coding MGP_129S1SvImJ_T0000958.1 MGP_129S1SvImJ_G0000890.1 mouse_genomes_project 15 5749173 5752141 - TEC TEC MGP_129S1SvImJ_T0013070.1 MGP_129S1SvImJ_G0011159.1 mouse_genomes_project 15 4359406 4360009 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0041128.1 MGP_129S1SvImJ_G0021910.1 mouse_genomes_project 15 66452741 66493248 - MGP_129S1SvImJ_P0041128 Ndrg1 protein_coding protein_coding MGP_129S1SvImJ_T0041129.1 MGP_129S1SvImJ_G0021910.1 mouse_genomes_project 15 66454286 66457890 - Ndrg1 protein_coding retained_intron MGP_129S1SvImJ_T0041130.1 MGP_129S1SvImJ_G0021910.1 mouse_genomes_project 15 66454497 66493247 - MGP_129S1SvImJ_P0041130 Ndrg1 protein_coding protein_coding MGP_129S1SvImJ_T0041131.1 MGP_129S1SvImJ_G0021910.1 mouse_genomes_project 15 66457578 66493247 - Ndrg1 protein_coding retained_intron MGP_129S1SvImJ_T0041132.1 MGP_129S1SvImJ_G0021910.1 mouse_genomes_project 15 66465432 66493247 - MGP_129S1SvImJ_P0041132 Ndrg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041133.1 MGP_129S1SvImJ_G0021910.1 mouse_genomes_project 15 66466494 66493247 - MGP_129S1SvImJ_P0041133 Ndrg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041134.1 MGP_129S1SvImJ_G0021910.1 mouse_genomes_project 15 66466499 66472269 - MGP_129S1SvImJ_P0041134 Ndrg1 protein_coding protein_coding MGP_129S1SvImJ_T0041135.1 MGP_129S1SvImJ_G0021910.1 mouse_genomes_project 15 66466499 66491533 - MGP_129S1SvImJ_P0041135 Ndrg1 protein_coding protein_coding MGP_129S1SvImJ_T0041136.1 MGP_129S1SvImJ_G0021910.1 mouse_genomes_project 15 66466512 66493224 - MGP_129S1SvImJ_P0041136 Ndrg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041137.1 MGP_129S1SvImJ_G0021910.1 mouse_genomes_project 15 66466517 66493203 - MGP_129S1SvImJ_P0041137 Ndrg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041138.1 MGP_129S1SvImJ_G0021910.1 mouse_genomes_project 15 66466549 66493224 - MGP_129S1SvImJ_P0041138 Ndrg1 protein_coding protein_coding MGP_129S1SvImJ_T0041139.1 MGP_129S1SvImJ_G0021910.1 mouse_genomes_project 15 66466556 66491548 - MGP_129S1SvImJ_P0041139 Ndrg1 protein_coding protein_coding MGP_129S1SvImJ_T0041140.1 MGP_129S1SvImJ_G0021910.1 mouse_genomes_project 15 66470326 66493248 - MGP_129S1SvImJ_P0041140 Ndrg1 protein_coding protein_coding MGP_129S1SvImJ_T0041118.1 MGP_129S1SvImJ_G0021908.1 mouse_genomes_project 15 66301629 66353855 - MGP_129S1SvImJ_P0041118 Sla protein_coding protein_coding MGP_129S1SvImJ_T0041119.1 MGP_129S1SvImJ_G0021908.1 mouse_genomes_project 15 66301674 66334873 - MGP_129S1SvImJ_P0041119 Sla protein_coding protein_coding MGP_129S1SvImJ_T0041120.1 MGP_129S1SvImJ_G0021908.1 mouse_genomes_project 15 66302888 66323945 - MGP_129S1SvImJ_P0041120 Sla protein_coding protein_coding MGP_129S1SvImJ_T0041121.1 MGP_129S1SvImJ_G0021908.1 mouse_genomes_project 15 66303352 66354038 - MGP_129S1SvImJ_P0041121 Sla protein_coding protein_coding MGP_129S1SvImJ_T0041122.1 MGP_129S1SvImJ_G0021908.1 mouse_genomes_project 15 66306530 66326101 - Sla protein_coding retained_intron MGP_129S1SvImJ_T0006817.1 MGP_129S1SvImJ_G0005622.1 mouse_genomes_project 15 100567888 100578578 + B130046B21Rik lincRNA lincRNA MGP_129S1SvImJ_T0042741.1 MGP_129S1SvImJ_G0022404.1 mouse_genomes_project 15 104372123 104388008 - MGP_129S1SvImJ_P0042741 Itgb7 protein_coding protein_coding MGP_129S1SvImJ_T0042742.1 MGP_129S1SvImJ_G0022404.1 mouse_genomes_project 15 104380791 104388008 - MGP_129S1SvImJ_P0042742 Itgb7 protein_coding protein_coding MGP_129S1SvImJ_T0042015.1 MGP_129S1SvImJ_G0022164.1 mouse_genomes_project 15 84189338 84216745 - MGP_129S1SvImJ_P0042015 Ttll1 protein_coding protein_coding MGP_129S1SvImJ_T0042016.1 MGP_129S1SvImJ_G0022164.1 mouse_genomes_project 15 84206963 84216668 - MGP_129S1SvImJ_P0042016 Ttll1 protein_coding protein_coding MGP_129S1SvImJ_T0042017.1 MGP_129S1SvImJ_G0022164.1 mouse_genomes_project 15 84211492 84216758 - Ttll1 protein_coding processed_transcript MGP_129S1SvImJ_T0040615.1 MGP_129S1SvImJ_G0021724.1 mouse_genomes_project 15 7639744 7674759 - MGP_129S1SvImJ_P0040615 Ttc23l protein_coding protein_coding MGP_129S1SvImJ_T0040616.1 MGP_129S1SvImJ_G0021724.1 mouse_genomes_project 15 7643590 7704204 - MGP_129S1SvImJ_P0040616 Ttc23l protein_coding protein_coding MGP_129S1SvImJ_T0040617.1 MGP_129S1SvImJ_G0021724.1 mouse_genomes_project 15 7681385 7704186 - MGP_129S1SvImJ_P0040617 Ttc23l protein_coding protein_coding MGP_129S1SvImJ_T0041154.1 MGP_129S1SvImJ_G0021917.1 mouse_genomes_project 15 72272603 72767953 - MGP_129S1SvImJ_P0041154 Trappc9 protein_coding protein_coding MGP_129S1SvImJ_T0041155.1 MGP_129S1SvImJ_G0021917.1 mouse_genomes_project 15 72272603 72762563 - MGP_129S1SvImJ_P0041155 Trappc9 protein_coding protein_coding MGP_129S1SvImJ_T0041156.1 MGP_129S1SvImJ_G0021917.1 mouse_genomes_project 15 72493616 72767953 - MGP_129S1SvImJ_P0041156 Trappc9 protein_coding protein_coding MGP_129S1SvImJ_T0041157.1 MGP_129S1SvImJ_G0021917.1 mouse_genomes_project 15 72546278 72767953 - MGP_129S1SvImJ_P0041157 Trappc9 protein_coding protein_coding MGP_129S1SvImJ_T0100752.1 MGP_129S1SvImJ_G0038819.1 mouse_genomes_project 15 69282429 69282558 - Gm23987 snoRNA snoRNA MGP_129S1SvImJ_T0042570.1 MGP_129S1SvImJ_G0022338.1 mouse_genomes_project 15 101537897 101572479 + MGP_129S1SvImJ_P0042570 Asic1 protein_coding protein_coding MGP_129S1SvImJ_T0099444.1 MGP_129S1SvImJ_G0037511.1 mouse_genomes_project 15 34549427 34549586 + Gm22979 snRNA snRNA MGP_129S1SvImJ_T0042455.1 MGP_129S1SvImJ_G0022300.1 mouse_genomes_project 15 100249805 100265528 - MGP_129S1SvImJ_P0042455 Kansl2 protein_coding protein_coding MGP_129S1SvImJ_T0042456.1 MGP_129S1SvImJ_G0022300.1 mouse_genomes_project 15 100250194 100265505 - MGP_129S1SvImJ_P0042456 Kansl2 protein_coding protein_coding MGP_129S1SvImJ_T0006760.1 MGP_129S1SvImJ_G0005586.1 mouse_genomes_project 15 30526721 30527377 + 4930518I17Rik lincRNA lincRNA MGP_129S1SvImJ_T0040701.1 MGP_129S1SvImJ_G0021752.1 mouse_genomes_project 15 24006904 24021021 + MGP_129S1SvImJ_P0040701 Zfp622 protein_coding protein_coding MGP_129S1SvImJ_T0100755.1 MGP_129S1SvImJ_G0038822.1 mouse_genomes_project 15 75791967 75792098 + Gm23747 snoRNA snoRNA MGP_129S1SvImJ_T0040770.1 MGP_129S1SvImJ_G0021782.1 mouse_genomes_project 15 32807381 32845740 + MGP_129S1SvImJ_P0040770 Pop1 protein_coding protein_coding MGP_129S1SvImJ_T0040771.1 MGP_129S1SvImJ_G0021782.1 mouse_genomes_project 15 32807400 32845729 + MGP_129S1SvImJ_P0040771 Pop1 protein_coding protein_coding MGP_129S1SvImJ_T0040772.1 MGP_129S1SvImJ_G0021782.1 mouse_genomes_project 15 32820901 32823184 + Pop1 protein_coding retained_intron MGP_129S1SvImJ_T0040773.1 MGP_129S1SvImJ_G0021782.1 mouse_genomes_project 15 32825153 32831982 + Pop1 protein_coding processed_transcript MGP_129S1SvImJ_T0040774.1 MGP_129S1SvImJ_G0021782.1 mouse_genomes_project 15 32829753 32844253 + Pop1 protein_coding retained_intron MGP_129S1SvImJ_T0040775.1 MGP_129S1SvImJ_G0021782.1 mouse_genomes_project 15 32841281 32844323 + Pop1 protein_coding retained_intron MGP_129S1SvImJ_T0042134.1 MGP_129S1SvImJ_G0022205.1 mouse_genomes_project 15 89727550 89728918 + MGP_129S1SvImJ_P0042134 Zdhhc25 protein_coding protein_coding MGP_129S1SvImJ_T0040447.1 MGP_129S1SvImJ_G0021682.1 mouse_genomes_project 15 171517 443290 - MGP_129S1SvImJ_P0040447 Ghr protein_coding protein_coding MGP_129S1SvImJ_T0040448.1 MGP_129S1SvImJ_G0021682.1 mouse_genomes_project 15 172766 441926 - MGP_129S1SvImJ_P0040448 Ghr protein_coding protein_coding MGP_129S1SvImJ_T0040449.1 MGP_129S1SvImJ_G0021682.1 mouse_genomes_project 15 181250 443248 - MGP_129S1SvImJ_P0040449 Ghr protein_coding protein_coding MGP_129S1SvImJ_T0040450.1 MGP_129S1SvImJ_G0021682.1 mouse_genomes_project 15 181264 330311 - MGP_129S1SvImJ_P0040450 Ghr protein_coding protein_coding MGP_129S1SvImJ_T0040451.1 MGP_129S1SvImJ_G0021682.1 mouse_genomes_project 15 187158 442680 - MGP_129S1SvImJ_P0040451 Ghr protein_coding protein_coding MGP_129S1SvImJ_T0040452.1 MGP_129S1SvImJ_G0021682.1 mouse_genomes_project 15 193197 443248 - Ghr protein_coding processed_transcript MGP_129S1SvImJ_T0040453.1 MGP_129S1SvImJ_G0021682.1 mouse_genomes_project 15 198194 443272 - Ghr protein_coding retained_intron MGP_129S1SvImJ_T0040454.1 MGP_129S1SvImJ_G0021682.1 mouse_genomes_project 15 199476 443271 - Ghr protein_coding processed_transcript MGP_129S1SvImJ_T0040455.1 MGP_129S1SvImJ_G0021682.1 mouse_genomes_project 15 238176 443552 - Ghr protein_coding retained_intron MGP_129S1SvImJ_T0040456.1 MGP_129S1SvImJ_G0021682.1 mouse_genomes_project 15 405635 443247 - Ghr protein_coding processed_transcript MGP_129S1SvImJ_T0040739.1 MGP_129S1SvImJ_G0021770.1 mouse_genomes_project 15 30473849 30474855 + MGP_129S1SvImJ_P0040739 Tas2r119 protein_coding protein_coding MGP_129S1SvImJ_T0041418.1 MGP_129S1SvImJ_G0021988.1 mouse_genomes_project 15 76427793 76436066 + MGP_129S1SvImJ_P0041418 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0042402.1 MGP_129S1SvImJ_G0022281.1 mouse_genomes_project 15 99531497 99587727 - MGP_129S1SvImJ_P0042402 Vdr protein_coding protein_coding MGP_129S1SvImJ_T0042403.1 MGP_129S1SvImJ_G0022281.1 mouse_genomes_project 15 99534598 99536755 - Vdr protein_coding retained_intron MGP_129S1SvImJ_T0042404.1 MGP_129S1SvImJ_G0022281.1 mouse_genomes_project 15 99554129 99576261 - MGP_129S1SvImJ_P0042404 Vdr protein_coding protein_coding MGP_129S1SvImJ_T0042405.1 MGP_129S1SvImJ_G0022281.1 mouse_genomes_project 15 99554201 99591729 - MGP_129S1SvImJ_P0042405 Vdr protein_coding protein_coding MGP_129S1SvImJ_T0042406.1 MGP_129S1SvImJ_G0022281.1 mouse_genomes_project 15 99563635 99591729 - MGP_129S1SvImJ_P0042406 Vdr protein_coding protein_coding MGP_129S1SvImJ_T0042407.1 MGP_129S1SvImJ_G0022281.1 mouse_genomes_project 15 99563647 99588979 - MGP_129S1SvImJ_P0042407 Vdr protein_coding protein_coding MGP_129S1SvImJ_T0041496.1 MGP_129S1SvImJ_G0022008.1 mouse_genomes_project 15 76803631 76806329 + MGP_129S1SvImJ_P0041496 Mfsd3 protein_coding protein_coding MGP_129S1SvImJ_T0040576.1 MGP_129S1SvImJ_G0021717.1 mouse_genomes_project 15 6676085 6858223 - MGP_129S1SvImJ_P0040576 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040577.1 MGP_129S1SvImJ_G0021717.1 mouse_genomes_project 15 6676089 6858292 - MGP_129S1SvImJ_P0040577 protein_coding protein_coding MGP_129S1SvImJ_T0040578.1 MGP_129S1SvImJ_G0021717.1 mouse_genomes_project 15 6698263 6858223 - MGP_129S1SvImJ_P0040578 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040579.1 MGP_129S1SvImJ_G0021717.1 mouse_genomes_project 15 6761695 6858322 - MGP_129S1SvImJ_P0040579 protein_coding protein_coding MGP_129S1SvImJ_T0040580.1 MGP_129S1SvImJ_G0021717.1 mouse_genomes_project 15 6788962 6858274 - MGP_129S1SvImJ_P0040580 protein_coding protein_coding MGP_129S1SvImJ_T0040581.1 MGP_129S1SvImJ_G0021717.1 mouse_genomes_project 15 6809883 6858274 - MGP_129S1SvImJ_P0040581 protein_coding protein_coding MGP_129S1SvImJ_T0040582.1 MGP_129S1SvImJ_G0021717.1 mouse_genomes_project 15 6809886 6858231 - MGP_129S1SvImJ_P0040582 protein_coding protein_coding MGP_129S1SvImJ_T0041528.1 MGP_129S1SvImJ_G0022018.1 mouse_genomes_project 15 77083068 77085259 + MGP_129S1SvImJ_P0041528 1110038F14Rik protein_coding protein_coding MGP_129S1SvImJ_T0099438.1 MGP_129S1SvImJ_G0037505.1 mouse_genomes_project 15 15578186 15578293 - Gm24713 snRNA snRNA MGP_129S1SvImJ_T0040628.1 MGP_129S1SvImJ_G0021733.1 mouse_genomes_project 15 9200921 9215637 - MGP_129S1SvImJ_P0040628 Sub1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040629.1 MGP_129S1SvImJ_G0021733.1 mouse_genomes_project 15 9205728 9215601 - Sub1 protein_coding retained_intron MGP_129S1SvImJ_T0040630.1 MGP_129S1SvImJ_G0021733.1 mouse_genomes_project 15 9206048 9215339 - Sub1 protein_coding processed_transcript MGP_129S1SvImJ_T0041881.1 MGP_129S1SvImJ_G0022118.1 mouse_genomes_project 15 82158589 82187729 - MGP_129S1SvImJ_P0041881 Rangap1 protein_coding protein_coding MGP_129S1SvImJ_T0041882.1 MGP_129S1SvImJ_G0022118.1 mouse_genomes_project 15 82158589 82187729 - MGP_129S1SvImJ_P0041882 Rangap1 protein_coding protein_coding MGP_129S1SvImJ_T0041883.1 MGP_129S1SvImJ_G0022118.1 mouse_genomes_project 15 82158959 82187676 - MGP_129S1SvImJ_P0041883 Rangap1 protein_coding protein_coding MGP_129S1SvImJ_T0041935.1 MGP_129S1SvImJ_G0022133.1 mouse_genomes_project 15 82554670 82614942 + MGP_129S1SvImJ_P0041935 Mei1 protein_coding protein_coding MGP_129S1SvImJ_T0041936.1 MGP_129S1SvImJ_G0022133.1 mouse_genomes_project 15 82554819 82615106 + MGP_129S1SvImJ_P0041936 Mei1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0041937.1 MGP_129S1SvImJ_G0022133.1 mouse_genomes_project 15 82569947 82615092 + MGP_129S1SvImJ_P0041937 Mei1 protein_coding protein_coding MGP_129S1SvImJ_T0041938.1 MGP_129S1SvImJ_G0022133.1 mouse_genomes_project 15 82569959 82615094 + MGP_129S1SvImJ_P0041938 Mei1 protein_coding protein_coding MGP_129S1SvImJ_T0041939.1 MGP_129S1SvImJ_G0022133.1 mouse_genomes_project 15 82570646 82615019 + MGP_129S1SvImJ_P0041939 Mei1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0100736.1 MGP_129S1SvImJ_G0038803.1 mouse_genomes_project 15 32746374 32746506 - Gm24523 snoRNA snoRNA MGP_129S1SvImJ_T0099454.1 MGP_129S1SvImJ_G0037521.1 mouse_genomes_project 15 52393358 52393424 + Gm27926 snRNA snRNA MGP_129S1SvImJ_T0010062.1 MGP_129S1SvImJ_G0008178.1 mouse_genomes_project 15 52638830 52638905 - Mir28c miRNA miRNA MGP_129S1SvImJ_T0099447.1 MGP_129S1SvImJ_G0037514.1 mouse_genomes_project 15 43049960 43050067 + Gm22392 snRNA snRNA MGP_129S1SvImJ_T0013080.1 MGP_129S1SvImJ_G0011169.1 mouse_genomes_project 15 11787787 11788116 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0040851.1 MGP_129S1SvImJ_G0021806.1 mouse_genomes_project 15 36728549 36736091 + MGP_129S1SvImJ_P0040851 Odf1 protein_coding protein_coding MGP_129S1SvImJ_T0003622.1 MGP_129S1SvImJ_G0003282.1 mouse_genomes_project 15 38247743 38264786 + Gm16291 antisense antisense MGP_129S1SvImJ_T0006769.1 MGP_129S1SvImJ_G0005595.1 mouse_genomes_project 15 40296337 40331968 - Gm26854 lincRNA lincRNA MGP_129S1SvImJ_T0041162.1 MGP_129S1SvImJ_G0021920.1 mouse_genomes_project 15 72918045 73157563 - MGP_129S1SvImJ_P0041162 Ptk2 protein_coding protein_coding MGP_129S1SvImJ_T0041163.1 MGP_129S1SvImJ_G0021920.1 mouse_genomes_project 15 72928686 73079889 - MGP_129S1SvImJ_P0041163 Ptk2 protein_coding protein_coding MGP_129S1SvImJ_T0041111.1 MGP_129S1SvImJ_G0021907.1 mouse_genomes_project 15 66188338 66373767 + MGP_129S1SvImJ_P0041111 Tg protein_coding protein_coding MGP_129S1SvImJ_T0041112.1 MGP_129S1SvImJ_G0021907.1 mouse_genomes_project 15 66206211 66373653 + MGP_129S1SvImJ_P0041112 Tg protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041113.1 MGP_129S1SvImJ_G0021907.1 mouse_genomes_project 15 66218616 66230974 + Tg protein_coding processed_transcript MGP_129S1SvImJ_T0041114.1 MGP_129S1SvImJ_G0021907.1 mouse_genomes_project 15 66222619 66373653 + MGP_129S1SvImJ_P0041114 Tg protein_coding protein_coding MGP_129S1SvImJ_T0041115.1 MGP_129S1SvImJ_G0021907.1 mouse_genomes_project 15 66231727 66241086 + Tg protein_coding processed_transcript MGP_129S1SvImJ_T0041116.1 MGP_129S1SvImJ_G0021907.1 mouse_genomes_project 15 66232369 66245468 + Tg protein_coding processed_transcript MGP_129S1SvImJ_T0041117.1 MGP_129S1SvImJ_G0021907.1 mouse_genomes_project 15 66256483 66373767 + MGP_129S1SvImJ_P0041117 Tg protein_coding protein_coding MGP_129S1SvImJ_T0041123.1 MGP_129S1SvImJ_G0021907.1 mouse_genomes_project 15 66321101 66373767 + Tg protein_coding processed_transcript MGP_129S1SvImJ_T0041934.1 MGP_129S1SvImJ_G0022132.1 mouse_genomes_project 15 82543824 82551212 + MGP_129S1SvImJ_P0041934 4930407I10Rik protein_coding protein_coding MGP_129S1SvImJ_T0099449.1 MGP_129S1SvImJ_G0037516.1 mouse_genomes_project 15 45651166 45651228 - Gm23665 snRNA snRNA MGP_129S1SvImJ_T0013087.1 MGP_129S1SvImJ_G0011176.1 mouse_genomes_project 15 35770574 35771252 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0042743.1 MGP_129S1SvImJ_G0022405.1 mouse_genomes_project 15 104391005 104416889 - MGP_129S1SvImJ_P0042743 Rarg protein_coding protein_coding MGP_129S1SvImJ_T0042744.1 MGP_129S1SvImJ_G0022405.1 mouse_genomes_project 15 104391007 104404416 - MGP_129S1SvImJ_P0042744 Rarg protein_coding protein_coding MGP_129S1SvImJ_T0042745.1 MGP_129S1SvImJ_G0022405.1 mouse_genomes_project 15 104396074 104416721 - MGP_129S1SvImJ_P0042745 Rarg protein_coding protein_coding MGP_129S1SvImJ_T0042746.1 MGP_129S1SvImJ_G0022405.1 mouse_genomes_project 15 104399861 104401512 - Rarg protein_coding processed_transcript MGP_129S1SvImJ_T0042747.1 MGP_129S1SvImJ_G0022405.1 mouse_genomes_project 15 104399865 104403147 - Rarg protein_coding processed_transcript MGP_129S1SvImJ_T0042748.1 MGP_129S1SvImJ_G0022405.1 mouse_genomes_project 15 104399865 104409718 - Rarg protein_coding processed_transcript MGP_129S1SvImJ_T0013089.1 MGP_129S1SvImJ_G0011178.1 mouse_genomes_project 15 35946971 35947444 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0040853.1 MGP_129S1SvImJ_G0021808.1 mouse_genomes_project 15 37006657 37039515 - MGP_129S1SvImJ_P0040853 Azin1 protein_coding protein_coding MGP_129S1SvImJ_T0040854.1 MGP_129S1SvImJ_G0021808.1 mouse_genomes_project 15 37006783 37039362 - MGP_129S1SvImJ_P0040854 Azin1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040855.1 MGP_129S1SvImJ_G0021808.1 mouse_genomes_project 15 37011216 37015898 - Azin1 protein_coding retained_intron MGP_129S1SvImJ_T0040856.1 MGP_129S1SvImJ_G0021808.1 mouse_genomes_project 15 37018910 37038355 - MGP_129S1SvImJ_P0040856 Azin1 protein_coding protein_coding MGP_129S1SvImJ_T0040857.1 MGP_129S1SvImJ_G0021808.1 mouse_genomes_project 15 37020659 37038414 - MGP_129S1SvImJ_P0040857 Azin1 protein_coding protein_coding MGP_129S1SvImJ_T0040858.1 MGP_129S1SvImJ_G0021808.1 mouse_genomes_project 15 37034667 37039443 - Azin1 protein_coding processed_transcript MGP_129S1SvImJ_T0041572.1 MGP_129S1SvImJ_G0022033.1 mouse_genomes_project 15 78084546 78104079 - MGP_129S1SvImJ_P0041572 Foxred2 protein_coding protein_coding MGP_129S1SvImJ_T0041573.1 MGP_129S1SvImJ_G0022033.1 mouse_genomes_project 15 78084550 78089913 - Foxred2 protein_coding retained_intron MGP_129S1SvImJ_T0041574.1 MGP_129S1SvImJ_G0022033.1 mouse_genomes_project 15 78085043 78104032 - MGP_129S1SvImJ_P0041574 Foxred2 protein_coding protein_coding MGP_129S1SvImJ_T0041575.1 MGP_129S1SvImJ_G0022033.1 mouse_genomes_project 15 78098222 78104040 - Foxred2 protein_coding retained_intron MGP_129S1SvImJ_T0042453.1 MGP_129S1SvImJ_G0022299.1 mouse_genomes_project 15 100218117 100223825 + MGP_129S1SvImJ_P0042453 Olfr279 protein_coding protein_coding MGP_129S1SvImJ_T0042454.1 MGP_129S1SvImJ_G0022299.1 mouse_genomes_project 15 100222892 100223825 + MGP_129S1SvImJ_P0042454 Olfr279 protein_coding protein_coding MGP_129S1SvImJ_T0042376.1 MGP_129S1SvImJ_G0022278.1 mouse_genomes_project 15 99413461 99437364 - MGP_129S1SvImJ_P0042376 Rapgef3 protein_coding protein_coding MGP_129S1SvImJ_T0042377.1 MGP_129S1SvImJ_G0022278.1 mouse_genomes_project 15 99413464 99437230 - MGP_129S1SvImJ_P0042377 Rapgef3 protein_coding protein_coding MGP_129S1SvImJ_T0042378.1 MGP_129S1SvImJ_G0022278.1 mouse_genomes_project 15 99413676 99437232 - MGP_129S1SvImJ_P0042378 Rapgef3 protein_coding protein_coding MGP_129S1SvImJ_T0042379.1 MGP_129S1SvImJ_G0022278.1 mouse_genomes_project 15 99413793 99436986 - MGP_129S1SvImJ_P0042379 Rapgef3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042380.1 MGP_129S1SvImJ_G0022278.1 mouse_genomes_project 15 99413876 99418557 - Rapgef3 protein_coding retained_intron MGP_129S1SvImJ_T0042381.1 MGP_129S1SvImJ_G0022278.1 mouse_genomes_project 15 99414056 99436966 - MGP_129S1SvImJ_P0042381 Rapgef3 protein_coding protein_coding MGP_129S1SvImJ_T0042382.1 MGP_129S1SvImJ_G0022278.1 mouse_genomes_project 15 99416213 99437153 - Rapgef3 protein_coding retained_intron MGP_129S1SvImJ_T0042383.1 MGP_129S1SvImJ_G0022278.1 mouse_genomes_project 15 99419391 99420390 - Rapgef3 protein_coding retained_intron MGP_129S1SvImJ_T0042384.1 MGP_129S1SvImJ_G0022278.1 mouse_genomes_project 15 99420041 99427187 - Rapgef3 protein_coding retained_intron MGP_129S1SvImJ_T0042386.1 MGP_129S1SvImJ_G0022278.1 mouse_genomes_project 15 99428581 99430110 - Rapgef3 protein_coding processed_transcript MGP_129S1SvImJ_T0042387.1 MGP_129S1SvImJ_G0022278.1 mouse_genomes_project 15 99429043 99436612 - MGP_129S1SvImJ_P0042387 Rapgef3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042388.1 MGP_129S1SvImJ_G0022278.1 mouse_genomes_project 15 99429048 99431564 - Rapgef3 protein_coding processed_transcript MGP_129S1SvImJ_T0042389.1 MGP_129S1SvImJ_G0022278.1 mouse_genomes_project 15 99430358 99436830 - MGP_129S1SvImJ_P0042389 Rapgef3 protein_coding protein_coding MGP_129S1SvImJ_T0042390.1 MGP_129S1SvImJ_G0022278.1 mouse_genomes_project 15 99430381 99431539 - Rapgef3 protein_coding retained_intron MGP_129S1SvImJ_T0042391.1 MGP_129S1SvImJ_G0022278.1 mouse_genomes_project 15 99436424 99437538 - MGP_129S1SvImJ_P0042391 Rapgef3 protein_coding protein_coding MGP_129S1SvImJ_T0006789.1 MGP_129S1SvImJ_G0005603.1 mouse_genomes_project 15 66756772 66915898 + lincRNA lincRNA MGP_129S1SvImJ_T0011408.1 MGP_129S1SvImJ_G0009524.1 mouse_genomes_project 15 61385218 61385391 + Gm27913 misc_RNA misc_RNA MGP_129S1SvImJ_T0041141.1 MGP_129S1SvImJ_G0021911.1 mouse_genomes_project 15 66624857 66659663 - MGP_129S1SvImJ_P0041141 St3gal1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0041450.1 MGP_129S1SvImJ_G0021996.1 mouse_genomes_project 15 76594197 76600124 - MGP_129S1SvImJ_P0041450 Scrt1 protein_coding protein_coding MGP_129S1SvImJ_T0041451.1 MGP_129S1SvImJ_G0021996.1 mouse_genomes_project 15 76594207 76599897 - MGP_129S1SvImJ_P0041451 Scrt1 protein_coding protein_coding MGP_129S1SvImJ_T0017503.1 MGP_129S1SvImJ_G0015306.1 mouse_genomes_project 15 81594839 81596829 + 4930483J18Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017504.1 MGP_129S1SvImJ_G0015306.1 mouse_genomes_project 15 81594918 81596822 + 4930483J18Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0042515.1 MGP_129S1SvImJ_G0022326.1 mouse_genomes_project 15 101062737 101071866 - MGP_129S1SvImJ_P0042515 Mcrs1 protein_coding protein_coding MGP_129S1SvImJ_T0098835.1 MGP_129S1SvImJ_G0036916.1 mouse_genomes_project 15 96590793 96660118 - 1700129L04Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0098836.1 MGP_129S1SvImJ_G0036916.1 mouse_genomes_project 15 96590867 96645687 - 1700129L04Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0041108.1 MGP_129S1SvImJ_G0021905.1 mouse_genomes_project 15 66034152 66074412 - MGP_129S1SvImJ_P0041108 Tmem71 protein_coding protein_coding MGP_129S1SvImJ_T0041109.1 MGP_129S1SvImJ_G0021905.1 mouse_genomes_project 15 66034248 66074403 - MGP_129S1SvImJ_P0041109 Tmem71 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0013073.1 MGP_129S1SvImJ_G0011162.1 mouse_genomes_project 15 6034535 6040307 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0040686.1 MGP_129S1SvImJ_G0021750.1 mouse_genomes_project 15 23616158 23819000 + MGP_129S1SvImJ_P0040686 Myo10 protein_coding protein_coding MGP_129S1SvImJ_T0040687.1 MGP_129S1SvImJ_G0021750.1 mouse_genomes_project 15 23616176 23782925 + MGP_129S1SvImJ_P0040687 Myo10 protein_coding protein_coding MGP_129S1SvImJ_T0040688.1 MGP_129S1SvImJ_G0021750.1 mouse_genomes_project 15 23616182 23700278 + Myo10 protein_coding retained_intron MGP_129S1SvImJ_T0040689.1 MGP_129S1SvImJ_G0021750.1 mouse_genomes_project 15 23668904 23723339 + Myo10 protein_coding processed_transcript MGP_129S1SvImJ_T0040690.1 MGP_129S1SvImJ_G0021750.1 mouse_genomes_project 15 23712247 23723390 + Myo10 protein_coding retained_intron MGP_129S1SvImJ_T0040691.1 MGP_129S1SvImJ_G0021750.1 mouse_genomes_project 15 23742985 23784358 + MGP_129S1SvImJ_P0040691 Myo10 protein_coding protein_coding MGP_129S1SvImJ_T0040692.1 MGP_129S1SvImJ_G0021750.1 mouse_genomes_project 15 23756421 23818998 + MGP_129S1SvImJ_P0040692 Myo10 protein_coding protein_coding MGP_129S1SvImJ_T0040693.1 MGP_129S1SvImJ_G0021750.1 mouse_genomes_project 15 23756490 23782935 + MGP_129S1SvImJ_P0040693 Myo10 protein_coding protein_coding MGP_129S1SvImJ_T0040694.1 MGP_129S1SvImJ_G0021750.1 mouse_genomes_project 15 23761909 23779370 + MGP_129S1SvImJ_P0040694 Myo10 protein_coding protein_coding MGP_129S1SvImJ_T0040695.1 MGP_129S1SvImJ_G0021750.1 mouse_genomes_project 15 23761929 23783573 + MGP_129S1SvImJ_P0040695 Myo10 protein_coding protein_coding MGP_129S1SvImJ_T0040696.1 MGP_129S1SvImJ_G0021750.1 mouse_genomes_project 15 23771840 23779619 + MGP_129S1SvImJ_P0040696 Myo10 protein_coding protein_coding MGP_129S1SvImJ_T0040697.1 MGP_129S1SvImJ_G0021750.1 mouse_genomes_project 15 23777260 23784221 + MGP_129S1SvImJ_P0040697 Myo10 protein_coding protein_coding MGP_129S1SvImJ_T0040698.1 MGP_129S1SvImJ_G0021750.1 mouse_genomes_project 15 23783353 23784532 + Myo10 protein_coding retained_intron MGP_129S1SvImJ_T0041952.1 MGP_129S1SvImJ_G0022143.1 mouse_genomes_project 15 82853580 82857917 + Fam109b protein_coding processed_transcript MGP_129S1SvImJ_T0041954.1 MGP_129S1SvImJ_G0022143.1 mouse_genomes_project 15 82855187 82857931 + Fam109b protein_coding processed_transcript MGP_129S1SvImJ_T0041955.1 MGP_129S1SvImJ_G0022143.1 mouse_genomes_project 15 82855492 82860383 + MGP_129S1SvImJ_P0041955 Fam109b protein_coding protein_coding MGP_129S1SvImJ_T0041957.1 MGP_129S1SvImJ_G0022143.1 mouse_genomes_project 15 82855813 82860370 + MGP_129S1SvImJ_P0041957 Fam109b protein_coding protein_coding MGP_129S1SvImJ_T0010077.1 MGP_129S1SvImJ_G0008193.1 mouse_genomes_project 15 79745256 79745333 + Gm44302 miRNA miRNA MGP_129S1SvImJ_T0042052.1 MGP_129S1SvImJ_G0022176.1 mouse_genomes_project 15 84999880 85100068 + MGP_129S1SvImJ_P0042052 Parvb protein_coding protein_coding MGP_129S1SvImJ_T0042053.1 MGP_129S1SvImJ_G0022176.1 mouse_genomes_project 15 84999903 85043343 + MGP_129S1SvImJ_P0042053 Parvb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042054.1 MGP_129S1SvImJ_G0022176.1 mouse_genomes_project 15 85029147 85069332 + Parvb protein_coding processed_transcript MGP_129S1SvImJ_T0013083.1 MGP_129S1SvImJ_G0011172.1 mouse_genomes_project 15 23676137 23676465 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006795.1 MGP_129S1SvImJ_G0005609.1 mouse_genomes_project 15 80035761 80053456 + Gm16576 lincRNA lincRNA MGP_129S1SvImJ_T0041320.1 MGP_129S1SvImJ_G0021971.1 mouse_genomes_project 15 76053341 76066615 - MGP_129S1SvImJ_P0041320 Fam83h protein_coding protein_coding MGP_129S1SvImJ_T0041321.1 MGP_129S1SvImJ_G0021971.1 mouse_genomes_project 15 76053341 76061746 - MGP_129S1SvImJ_P0041321 Fam83h protein_coding protein_coding MGP_129S1SvImJ_T0041840.1 MGP_129S1SvImJ_G0022108.1 mouse_genomes_project 15 81644843 81649721 + MGP_129S1SvImJ_P0041840 Mchr1 protein_coding protein_coding MGP_129S1SvImJ_T0098508.1 MGP_129S1SvImJ_G0036593.1 mouse_genomes_project 15 37569484 37569592 - n-R5s39 rRNA rRNA MGP_129S1SvImJ_T0042142.1 MGP_129S1SvImJ_G0022208.1 mouse_genomes_project 15 89962088 89974408 - Alg12 protein_coding retained_intron MGP_129S1SvImJ_T0042143.1 MGP_129S1SvImJ_G0022208.1 mouse_genomes_project 15 89962088 89977692 - MGP_129S1SvImJ_P0042143 Alg12 protein_coding protein_coding MGP_129S1SvImJ_T0042144.1 MGP_129S1SvImJ_G0022208.1 mouse_genomes_project 15 89962089 89977659 - MGP_129S1SvImJ_P0042144 Alg12 protein_coding protein_coding MGP_129S1SvImJ_T0042145.1 MGP_129S1SvImJ_G0022208.1 mouse_genomes_project 15 89972844 89977466 - MGP_129S1SvImJ_P0042145 Alg12 protein_coding protein_coding MGP_129S1SvImJ_T0041214.1 MGP_129S1SvImJ_G0021934.1 mouse_genomes_project 15 74514866 74516939 - MGP_129S1SvImJ_P0041214 Lypd2 protein_coding protein_coding MGP_129S1SvImJ_T0041215.1 MGP_129S1SvImJ_G0021934.1 mouse_genomes_project 15 74515420 74516927 - Lypd2 protein_coding retained_intron MGP_129S1SvImJ_T0013082.1 MGP_129S1SvImJ_G0011171.1 mouse_genomes_project 15 20816067 20818269 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010092.1 MGP_129S1SvImJ_G0008208.1 mouse_genomes_project 15 83254971 83255028 - Gm27463 miRNA miRNA MGP_129S1SvImJ_T0041564.1 MGP_129S1SvImJ_G0022032.1 mouse_genomes_project 15 78055306 78055960 - Txn2 protein_coding processed_transcript MGP_129S1SvImJ_T0041565.1 MGP_129S1SvImJ_G0022032.1 mouse_genomes_project 15 78055306 78071798 - MGP_129S1SvImJ_P0041565 Txn2 protein_coding protein_coding MGP_129S1SvImJ_T0041566.1 MGP_129S1SvImJ_G0022032.1 mouse_genomes_project 15 78055306 78070635 - MGP_129S1SvImJ_P0041566 Txn2 protein_coding protein_coding MGP_129S1SvImJ_T0041567.1 MGP_129S1SvImJ_G0022032.1 mouse_genomes_project 15 78055463 78070518 - MGP_129S1SvImJ_P0041567 Txn2 protein_coding protein_coding MGP_129S1SvImJ_T0041568.1 MGP_129S1SvImJ_G0022032.1 mouse_genomes_project 15 78055469 78071760 - MGP_129S1SvImJ_P0041568 Txn2 protein_coding protein_coding MGP_129S1SvImJ_T0041569.1 MGP_129S1SvImJ_G0022032.1 mouse_genomes_project 15 78059785 78070525 - MGP_129S1SvImJ_P0041569 Txn2 protein_coding protein_coding MGP_129S1SvImJ_T0041570.1 MGP_129S1SvImJ_G0022032.1 mouse_genomes_project 15 78065490 78071766 - MGP_129S1SvImJ_P0041570 Txn2 protein_coding protein_coding MGP_129S1SvImJ_T0041571.1 MGP_129S1SvImJ_G0022032.1 mouse_genomes_project 15 78069187 78071789 - MGP_129S1SvImJ_P0041571 Txn2 protein_coding protein_coding MGP_129S1SvImJ_T0042347.1 MGP_129S1SvImJ_G0022261.1 mouse_genomes_project 15 96049729 96061676 - MGP_129S1SvImJ_P0042347 Twf1 protein_coding protein_coding MGP_129S1SvImJ_T0042348.1 MGP_129S1SvImJ_G0022261.1 mouse_genomes_project 15 96051442 96057254 - Twf1 protein_coding processed_transcript MGP_129S1SvImJ_T0042349.1 MGP_129S1SvImJ_G0022261.1 mouse_genomes_project 15 96052796 96053163 - Twf1 protein_coding retained_intron MGP_129S1SvImJ_T0042350.1 MGP_129S1SvImJ_G0022261.1 mouse_genomes_project 15 96056219 96061686 - MGP_129S1SvImJ_P0042350 Twf1 protein_coding protein_coding MGP_129S1SvImJ_T0010101.1 MGP_129S1SvImJ_G0008217.1 mouse_genomes_project 15 88101171 88101268 + Gm23416 miRNA miRNA MGP_129S1SvImJ_T0040574.1 MGP_129S1SvImJ_G0021715.1 mouse_genomes_project 15 6530532 6559575 + MGP_129S1SvImJ_P0040574 Capsl protein_coding protein_coding MGP_129S1SvImJ_T0099467.1 MGP_129S1SvImJ_G0037534.1 mouse_genomes_project 15 76276706 76276811 - Gm25720 snRNA snRNA MGP_129S1SvImJ_T0041841.1 MGP_129S1SvImJ_G0022109.1 mouse_genomes_project 15 81736385 81781420 - MGP_129S1SvImJ_P0041841 Slc25a17 protein_coding protein_coding MGP_129S1SvImJ_T0042487.1 MGP_129S1SvImJ_G0022311.1 mouse_genomes_project 15 100550822 100554783 + MGP_129S1SvImJ_P0042487 Wnt1 protein_coding protein_coding MGP_129S1SvImJ_T0042808.1 MGP_129S1SvImJ_G0022419.1 mouse_genomes_project 15 104714037 104714914 - MGP_129S1SvImJ_P0042808 Npff protein_coding protein_coding MGP_129S1SvImJ_T0042810.1 MGP_129S1SvImJ_G0022419.1 mouse_genomes_project 15 104714044 104715141 - Npff protein_coding retained_intron MGP_129S1SvImJ_T0041779.1 MGP_129S1SvImJ_G0022091.1 mouse_genomes_project 15 80295326 80315763 - MGP_129S1SvImJ_P0041779 Pdgfb protein_coding protein_coding MGP_129S1SvImJ_T0000962.1 MGP_129S1SvImJ_G0000894.1 mouse_genomes_project 15 23200899 23201409 - TEC TEC MGP_129S1SvImJ_T0099478.1 MGP_129S1SvImJ_G0037545.1 mouse_genomes_project 15 90189471 90189630 + Gm23737 snRNA snRNA MGP_129S1SvImJ_T0003651.1 MGP_129S1SvImJ_G0003304.1 mouse_genomes_project 15 99436114 99438279 + Rapgef3os2 antisense antisense MGP_129S1SvImJ_T0040540.1 MGP_129S1SvImJ_G0021706.1 mouse_genomes_project 15 5351175 5509489 - MGP_129S1SvImJ_P0040540 Nipbl protein_coding protein_coding MGP_129S1SvImJ_T0040583.1 MGP_129S1SvImJ_G0021718.1 mouse_genomes_project 15 7292565 7454922 + Prlr protein_coding retained_intron MGP_129S1SvImJ_T0040584.1 MGP_129S1SvImJ_G0021718.1 mouse_genomes_project 15 7292741 7473827 + Prlr protein_coding processed_transcript MGP_129S1SvImJ_T0040585.1 MGP_129S1SvImJ_G0021718.1 mouse_genomes_project 15 7292973 7474097 + MGP_129S1SvImJ_P0040585 Prlr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040586.1 MGP_129S1SvImJ_G0021718.1 mouse_genomes_project 15 7292982 7462542 + MGP_129S1SvImJ_P0040586 Prlr protein_coding protein_coding MGP_129S1SvImJ_T0040587.1 MGP_129S1SvImJ_G0021718.1 mouse_genomes_project 15 7293108 7446597 + Prlr protein_coding retained_intron MGP_129S1SvImJ_T0040588.1 MGP_129S1SvImJ_G0021718.1 mouse_genomes_project 15 7332393 7445885 + Prlr protein_coding processed_transcript MGP_129S1SvImJ_T0040589.1 MGP_129S1SvImJ_G0021718.1 mouse_genomes_project 15 7334887 7445951 + MGP_129S1SvImJ_P0040589 Prlr protein_coding protein_coding MGP_129S1SvImJ_T0040590.1 MGP_129S1SvImJ_G0021718.1 mouse_genomes_project 15 7342872 7471321 + MGP_129S1SvImJ_P0040590 Prlr protein_coding protein_coding MGP_129S1SvImJ_T0040591.1 MGP_129S1SvImJ_G0021718.1 mouse_genomes_project 15 7342872 7467524 + MGP_129S1SvImJ_P0040591 Prlr protein_coding protein_coding MGP_129S1SvImJ_T0040592.1 MGP_129S1SvImJ_G0021718.1 mouse_genomes_project 15 7342872 7474729 + MGP_129S1SvImJ_P0040592 Prlr protein_coding protein_coding MGP_129S1SvImJ_T0040593.1 MGP_129S1SvImJ_G0021718.1 mouse_genomes_project 15 7369628 7449099 + MGP_129S1SvImJ_P0040593 Prlr protein_coding protein_coding MGP_129S1SvImJ_T0040594.1 MGP_129S1SvImJ_G0021718.1 mouse_genomes_project 15 7439527 7449081 + MGP_129S1SvImJ_P0040594 Prlr protein_coding protein_coding MGP_129S1SvImJ_T0006762.1 MGP_129S1SvImJ_G0005588.1 mouse_genomes_project 15 35439454 35480887 + Gm26766 lincRNA lincRNA MGP_129S1SvImJ_T0010056.1 MGP_129S1SvImJ_G0008172.1 mouse_genomes_project 15 35816803 35816929 - Gm23654 miRNA miRNA MGP_129S1SvImJ_T0041142.1 MGP_129S1SvImJ_G0021912.1 mouse_genomes_project 15 67637076 67819951 - MGP_129S1SvImJ_P0041142 Zfat protein_coding protein_coding MGP_129S1SvImJ_T0041143.1 MGP_129S1SvImJ_G0021912.1 mouse_genomes_project 15 67637631 67819882 - MGP_129S1SvImJ_P0041143 Zfat protein_coding protein_coding MGP_129S1SvImJ_T0041144.1 MGP_129S1SvImJ_G0021912.1 mouse_genomes_project 15 67637632 67819933 - MGP_129S1SvImJ_P0041144 Zfat protein_coding protein_coding MGP_129S1SvImJ_T0041145.1 MGP_129S1SvImJ_G0021912.1 mouse_genomes_project 15 67736817 67819942 - MGP_129S1SvImJ_P0041145 Zfat protein_coding protein_coding MGP_129S1SvImJ_T0041146.1 MGP_129S1SvImJ_G0021912.1 mouse_genomes_project 15 67779639 67819944 - Zfat protein_coding retained_intron MGP_129S1SvImJ_T0003645.1 MGP_129S1SvImJ_G0003300.1 mouse_genomes_project 15 87039736 87042649 - Gm15722 antisense antisense MGP_129S1SvImJ_T0041522.1 MGP_129S1SvImJ_G0022013.1 mouse_genomes_project 15 76967488 76988413 - MGP_129S1SvImJ_P0041522 Zfp251 protein_coding protein_coding MGP_129S1SvImJ_T0041266.1 MGP_129S1SvImJ_G0021954.1 mouse_genomes_project 15 75619420 75621006 + MGP_129S1SvImJ_P0041266 Gpihbp1 protein_coding protein_coding MGP_129S1SvImJ_T0041267.1 MGP_129S1SvImJ_G0021954.1 mouse_genomes_project 15 75619422 75621006 + MGP_129S1SvImJ_P0041267 Gpihbp1 protein_coding protein_coding MGP_129S1SvImJ_T0041268.1 MGP_129S1SvImJ_G0021954.1 mouse_genomes_project 15 75619446 75622274 + MGP_129S1SvImJ_P0041268 Gpihbp1 protein_coding protein_coding MGP_129S1SvImJ_T0041269.1 MGP_129S1SvImJ_G0021954.1 mouse_genomes_project 15 75619460 75620981 + Gpihbp1 protein_coding retained_intron MGP_129S1SvImJ_T0041270.1 MGP_129S1SvImJ_G0021954.1 mouse_genomes_project 15 75619460 75620737 + Gpihbp1 protein_coding retained_intron MGP_129S1SvImJ_T0042853.1 MGP_129S1SvImJ_G0022436.1 mouse_genomes_project 15 105502580 105509830 - MGP_129S1SvImJ_P0042853 Nfe2 protein_coding protein_coding MGP_129S1SvImJ_T0042854.1 MGP_129S1SvImJ_G0022436.1 mouse_genomes_project 15 105502585 105505917 - MGP_129S1SvImJ_P0042854 Nfe2 protein_coding protein_coding MGP_129S1SvImJ_T0042855.1 MGP_129S1SvImJ_G0022436.1 mouse_genomes_project 15 105502585 105505866 - MGP_129S1SvImJ_P0042855 Nfe2 protein_coding protein_coding MGP_129S1SvImJ_T0042856.1 MGP_129S1SvImJ_G0022436.1 mouse_genomes_project 15 105502588 105506077 - MGP_129S1SvImJ_P0042856 Nfe2 protein_coding protein_coding MGP_129S1SvImJ_T0042857.1 MGP_129S1SvImJ_G0022436.1 mouse_genomes_project 15 105502643 105505916 - MGP_129S1SvImJ_P0042857 Nfe2 protein_coding protein_coding MGP_129S1SvImJ_T0042858.1 MGP_129S1SvImJ_G0022436.1 mouse_genomes_project 15 105503323 105507553 - MGP_129S1SvImJ_P0042858 Nfe2 protein_coding protein_coding MGP_129S1SvImJ_T0042859.1 MGP_129S1SvImJ_G0022436.1 mouse_genomes_project 15 105503375 105508453 - MGP_129S1SvImJ_P0042859 Nfe2 protein_coding protein_coding MGP_129S1SvImJ_T0042860.1 MGP_129S1SvImJ_G0022436.1 mouse_genomes_project 15 105503437 105506088 - MGP_129S1SvImJ_P0042860 Nfe2 protein_coding protein_coding MGP_129S1SvImJ_T0042861.1 MGP_129S1SvImJ_G0022436.1 mouse_genomes_project 15 105503607 105507211 - MGP_129S1SvImJ_P0042861 Nfe2 protein_coding protein_coding MGP_129S1SvImJ_T0042862.1 MGP_129S1SvImJ_G0022436.1 mouse_genomes_project 15 105503717 105512794 - MGP_129S1SvImJ_P0042862 Nfe2 protein_coding protein_coding MGP_129S1SvImJ_T0041484.1 MGP_129S1SvImJ_G0022005.1 mouse_genomes_project 15 76761670 76763335 - MGP_129S1SvImJ_P0041484 Foxh1 protein_coding protein_coding MGP_129S1SvImJ_T0040964.1 MGP_129S1SvImJ_G0021855.1 mouse_genomes_project 15 54392952 54609388 + MGP_129S1SvImJ_P0040964 Col14a1 protein_coding protein_coding MGP_129S1SvImJ_T0040965.1 MGP_129S1SvImJ_G0021855.1 mouse_genomes_project 15 54392952 54609387 + MGP_129S1SvImJ_P0040965 Col14a1 protein_coding protein_coding MGP_129S1SvImJ_T0040966.1 MGP_129S1SvImJ_G0021855.1 mouse_genomes_project 15 54392953 54609386 + MGP_129S1SvImJ_P0040966 Col14a1 protein_coding protein_coding MGP_129S1SvImJ_T0040967.1 MGP_129S1SvImJ_G0021855.1 mouse_genomes_project 15 54531842 54608274 + MGP_129S1SvImJ_P0040967 Col14a1 protein_coding protein_coding MGP_129S1SvImJ_T0041758.1 MGP_129S1SvImJ_G0022089.1 mouse_genomes_project 15 80190521 80204755 + MGP_129S1SvImJ_P0041758 Apobec3 protein_coding protein_coding MGP_129S1SvImJ_T0041759.1 MGP_129S1SvImJ_G0022089.1 mouse_genomes_project 15 80190556 80204808 + MGP_129S1SvImJ_P0041759 Apobec3 protein_coding protein_coding MGP_129S1SvImJ_T0041760.1 MGP_129S1SvImJ_G0022089.1 mouse_genomes_project 15 80190911 80195783 + Apobec3 protein_coding processed_transcript MGP_129S1SvImJ_T0041761.1 MGP_129S1SvImJ_G0022089.1 mouse_genomes_project 15 80191268 80207642 + MGP_129S1SvImJ_P0041761 Apobec3 protein_coding protein_coding MGP_129S1SvImJ_T0041762.1 MGP_129S1SvImJ_G0022089.1 mouse_genomes_project 15 80191271 80204700 + MGP_129S1SvImJ_P0041762 Apobec3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041763.1 MGP_129S1SvImJ_G0022089.1 mouse_genomes_project 15 80191302 80206581 + MGP_129S1SvImJ_P0041763 Apobec3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041764.1 MGP_129S1SvImJ_G0022089.1 mouse_genomes_project 15 80191308 80207301 + MGP_129S1SvImJ_P0041764 Apobec3 protein_coding protein_coding MGP_129S1SvImJ_T0041765.1 MGP_129S1SvImJ_G0022089.1 mouse_genomes_project 15 80191309 80207649 + MGP_129S1SvImJ_P0041765 Apobec3 protein_coding protein_coding MGP_129S1SvImJ_T0041766.1 MGP_129S1SvImJ_G0022089.1 mouse_genomes_project 15 80191315 80214822 + MGP_129S1SvImJ_P0041766 Apobec3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041767.1 MGP_129S1SvImJ_G0022089.1 mouse_genomes_project 15 80191344 80206581 + MGP_129S1SvImJ_P0041767 Apobec3 protein_coding protein_coding MGP_129S1SvImJ_T0041768.1 MGP_129S1SvImJ_G0022089.1 mouse_genomes_project 15 80193916 80196204 + MGP_129S1SvImJ_P0041768 Apobec3 protein_coding protein_coding MGP_129S1SvImJ_T0041769.1 MGP_129S1SvImJ_G0022089.1 mouse_genomes_project 15 80195841 80205118 + Apobec3 protein_coding retained_intron MGP_129S1SvImJ_T0041770.1 MGP_129S1SvImJ_G0022089.1 mouse_genomes_project 15 80199481 80207136 + Apobec3 protein_coding retained_intron MGP_129S1SvImJ_T0041771.1 MGP_129S1SvImJ_G0022089.1 mouse_genomes_project 15 80205322 80206289 + Apobec3 protein_coding retained_intron MGP_129S1SvImJ_T0099488.1 MGP_129S1SvImJ_G0037555.1 mouse_genomes_project 15 104826970 104827077 - Gm25141 snRNA snRNA MGP_129S1SvImJ_T0042839.1 MGP_129S1SvImJ_G0022430.1 mouse_genomes_project 15 105225925 105229140 + MGP_129S1SvImJ_P0042839 Hoxc8 protein_coding protein_coding MGP_129S1SvImJ_T0042840.1 MGP_129S1SvImJ_G0022430.1 mouse_genomes_project 15 105227207 105229430 + Hoxc8 protein_coding retained_intron MGP_129S1SvImJ_T0102265.1 MGP_129S1SvImJ_G0040099.1 mouse_genomes_project 15 100196775 100200790 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0042257.1 MGP_129S1SvImJ_G0022238.1 mouse_genomes_project 15 90675918 90680868 - MGP_129S1SvImJ_P0042257 Arsa protein_coding protein_coding MGP_129S1SvImJ_T0042258.1 MGP_129S1SvImJ_G0022238.1 mouse_genomes_project 15 90675970 90679556 - Arsa protein_coding retained_intron MGP_129S1SvImJ_T0042259.1 MGP_129S1SvImJ_G0022238.1 mouse_genomes_project 15 90676682 90677714 - MGP_129S1SvImJ_P0042259 Arsa protein_coding protein_coding MGP_129S1SvImJ_T0042260.1 MGP_129S1SvImJ_G0022238.1 mouse_genomes_project 15 90679673 90680854 - Arsa protein_coding processed_transcript MGP_129S1SvImJ_T0041030.1 MGP_129S1SvImJ_G0021881.1 mouse_genomes_project 15 58144728 58176359 - MGP_129S1SvImJ_P0041030 Mtss1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0041031.1 MGP_129S1SvImJ_G0021881.1 mouse_genomes_project 15 58144742 58286449 - MGP_129S1SvImJ_P0041031 Mtss1 protein_coding protein_coding MGP_129S1SvImJ_T0041579.1 MGP_129S1SvImJ_G0022037.1 mouse_genomes_project 15 78353478 78366640 - MGP_129S1SvImJ_P0041579 Pvalb protein_coding protein_coding MGP_129S1SvImJ_T0041580.1 MGP_129S1SvImJ_G0022037.1 mouse_genomes_project 15 78353481 78368803 - MGP_129S1SvImJ_P0041580 Pvalb protein_coding protein_coding MGP_129S1SvImJ_T0040476.1 MGP_129S1SvImJ_G0021689.1 mouse_genomes_project 15 1876240 1958281 - MGP_129S1SvImJ_P0040476 C7 protein_coding protein_coding MGP_129S1SvImJ_T0040477.1 MGP_129S1SvImJ_G0021689.1 mouse_genomes_project 15 1876300 1958170 - MGP_129S1SvImJ_P0040477 C7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0013069.1 MGP_129S1SvImJ_G0011158.1 mouse_genomes_project 15 2117301 2118536 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0042318.1 MGP_129S1SvImJ_G0022253.1 mouse_genomes_project 15 94640709 94679146 - MGP_129S1SvImJ_P0042318 Gxylt1 protein_coding protein_coding MGP_129S1SvImJ_T0042319.1 MGP_129S1SvImJ_G0022253.1 mouse_genomes_project 15 94647305 94679057 - MGP_129S1SvImJ_P0042319 Gxylt1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0006753.1 MGP_129S1SvImJ_G0005583.1 mouse_genomes_project 15 9183257 9189053 + 1700047G03Rik lincRNA lincRNA MGP_129S1SvImJ_T0006754.1 MGP_129S1SvImJ_G0005583.1 mouse_genomes_project 15 9183318 9189662 + 1700047G03Rik lincRNA lincRNA MGP_129S1SvImJ_T0006755.1 MGP_129S1SvImJ_G0005583.1 mouse_genomes_project 15 9183405 9189084 + 1700047G03Rik lincRNA lincRNA MGP_129S1SvImJ_T0006756.1 MGP_129S1SvImJ_G0005583.1 mouse_genomes_project 15 9186040 9189647 + 1700047G03Rik lincRNA lincRNA MGP_129S1SvImJ_T0040721.1 MGP_129S1SvImJ_G0021764.1 mouse_genomes_project 15 29509524 29592521 - MGP_129S1SvImJ_P0040721 Ankrd33b protein_coding protein_coding MGP_129S1SvImJ_T0040722.1 MGP_129S1SvImJ_G0021764.1 mouse_genomes_project 15 29509525 29592488 - MGP_129S1SvImJ_P0040722 Ankrd33b protein_coding protein_coding MGP_129S1SvImJ_T0040723.1 MGP_129S1SvImJ_G0021764.1 mouse_genomes_project 15 29510482 29592294 - MGP_129S1SvImJ_P0040723 Ankrd33b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040724.1 MGP_129S1SvImJ_G0021764.1 mouse_genomes_project 15 29511395 29592488 - MGP_129S1SvImJ_P0040724 Ankrd33b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040725.1 MGP_129S1SvImJ_G0021764.1 mouse_genomes_project 15 29541450 29592330 - MGP_129S1SvImJ_P0040725 Ankrd33b protein_coding protein_coding MGP_129S1SvImJ_T0041083.1 MGP_129S1SvImJ_G0021897.1 mouse_genomes_project 15 64176516 64417723 - MGP_129S1SvImJ_P0041083 Adcy8 protein_coding protein_coding MGP_129S1SvImJ_T0042281.1 MGP_129S1SvImJ_G0022243.1 mouse_genomes_project 15 91467893 91474081 + MGP_129S1SvImJ_P0042281 Alg10b protein_coding protein_coding MGP_129S1SvImJ_T0042790.1 MGP_129S1SvImJ_G0022417.1 mouse_genomes_project 15 104693451 104693616 + MGP_129S1SvImJ_P0042790 Gm10337 protein_coding protein_coding MGP_129S1SvImJ_T0017495.1 MGP_129S1SvImJ_G0015300.1 mouse_genomes_project 15 73392204 73398411 + 1700010B13Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017496.1 MGP_129S1SvImJ_G0015300.1 mouse_genomes_project 15 73392226 73393969 + 1700010B13Rik processed_transcript retained_intron MGP_129S1SvImJ_T0042352.1 MGP_129S1SvImJ_G0022263.1 mouse_genomes_project 15 96723512 97046042 - MGP_129S1SvImJ_P0042352 Nell2 protein_coding protein_coding MGP_129S1SvImJ_T0042353.1 MGP_129S1SvImJ_G0022263.1 mouse_genomes_project 15 96723995 97045588 - MGP_129S1SvImJ_P0042353 Nell2 protein_coding protein_coding MGP_129S1SvImJ_T0041636.1 MGP_129S1SvImJ_G0022059.1 mouse_genomes_project 15 79189345 79210401 + Triobp protein_coding processed_transcript MGP_129S1SvImJ_T0041637.1 MGP_129S1SvImJ_G0022059.1 mouse_genomes_project 15 79189345 79249117 + MGP_129S1SvImJ_P0041637 Triobp protein_coding protein_coding MGP_129S1SvImJ_T0041638.1 MGP_129S1SvImJ_G0022059.1 mouse_genomes_project 15 79189345 79248815 + MGP_129S1SvImJ_P0041638 Triobp protein_coding protein_coding MGP_129S1SvImJ_T0041639.1 MGP_129S1SvImJ_G0022059.1 mouse_genomes_project 15 79189866 79194780 + Triobp protein_coding retained_intron MGP_129S1SvImJ_T0041640.1 MGP_129S1SvImJ_G0022059.1 mouse_genomes_project 15 79226271 79249114 + MGP_129S1SvImJ_P0041640 Triobp protein_coding protein_coding MGP_129S1SvImJ_T0041641.1 MGP_129S1SvImJ_G0022059.1 mouse_genomes_project 15 79226286 79249112 + MGP_129S1SvImJ_P0041641 Triobp protein_coding protein_coding MGP_129S1SvImJ_T0041642.1 MGP_129S1SvImJ_G0022059.1 mouse_genomes_project 15 79226308 79238130 + MGP_129S1SvImJ_P0041642 Triobp protein_coding protein_coding MGP_129S1SvImJ_T0041643.1 MGP_129S1SvImJ_G0022059.1 mouse_genomes_project 15 79226956 79234710 + MGP_129S1SvImJ_P0041643 Triobp protein_coding protein_coding MGP_129S1SvImJ_T0041644.1 MGP_129S1SvImJ_G0022059.1 mouse_genomes_project 15 79245451 79247967 + Triobp protein_coding processed_transcript MGP_129S1SvImJ_T0003659.1 MGP_129S1SvImJ_G0003312.1 mouse_genomes_project 15 101829067 101851649 + Gm21917 antisense antisense MGP_129S1SvImJ_T0003660.1 MGP_129S1SvImJ_G0003312.1 mouse_genomes_project 15 101829067 101831054 + Gm21917 antisense antisense MGP_129S1SvImJ_T0042700.1 MGP_129S1SvImJ_G0022377.1 mouse_genomes_project 15 103622098 103631762 - MGP_129S1SvImJ_P0042700 Krt84 protein_coding protein_coding MGP_129S1SvImJ_T0100764.1 MGP_129S1SvImJ_G0038831.1 mouse_genomes_project 15 100946878 100946984 - Gm25183 snoRNA snoRNA MGP_129S1SvImJ_T0041255.1 MGP_129S1SvImJ_G0021951.1 mouse_genomes_project 15 75117409 75122968 + MGP_129S1SvImJ_P0041255 BC025446 protein_coding protein_coding MGP_129S1SvImJ_T0041256.1 MGP_129S1SvImJ_G0021951.1 mouse_genomes_project 15 75117629 75123679 + MGP_129S1SvImJ_P0041256 BC025446 protein_coding protein_coding MGP_129S1SvImJ_T0102259.1 MGP_129S1SvImJ_G0040093.1 mouse_genomes_project 15 75200888 75204038 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0042236.1 MGP_129S1SvImJ_G0022231.1 mouse_genomes_project 15 90568685 90570489 - MGP_129S1SvImJ_P0042236 Odf3b protein_coding protein_coding MGP_129S1SvImJ_T0042237.1 MGP_129S1SvImJ_G0022231.1 mouse_genomes_project 15 90568741 90570413 - MGP_129S1SvImJ_P0042237 Odf3b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042841.1 MGP_129S1SvImJ_G0022431.1 mouse_genomes_project 15 105233568 105246071 + Hoxc6 protein_coding processed_transcript MGP_129S1SvImJ_T0042842.1 MGP_129S1SvImJ_G0022431.1 mouse_genomes_project 15 105235841 105245309 + Hoxc6 protein_coding processed_transcript MGP_129S1SvImJ_T0042843.1 MGP_129S1SvImJ_G0022431.1 mouse_genomes_project 15 105244875 105247184 + MGP_129S1SvImJ_P0042843 Hoxc6 protein_coding protein_coding MGP_129S1SvImJ_T0041899.1 MGP_129S1SvImJ_G0022124.1 mouse_genomes_project 15 82343478 82388987 + MGP_129S1SvImJ_P0041899 Aco2 protein_coding protein_coding MGP_129S1SvImJ_T0041900.1 MGP_129S1SvImJ_G0022124.1 mouse_genomes_project 15 82343653 82360831 + Aco2 protein_coding retained_intron MGP_129S1SvImJ_T0041901.1 MGP_129S1SvImJ_G0022124.1 mouse_genomes_project 15 82343653 82360832 + Aco2 protein_coding processed_transcript MGP_129S1SvImJ_T0041902.1 MGP_129S1SvImJ_G0022124.1 mouse_genomes_project 15 82380932 82384363 + Aco2 protein_coding retained_intron MGP_129S1SvImJ_T0041903.1 MGP_129S1SvImJ_G0022124.1 mouse_genomes_project 15 82381212 82384017 + Aco2 protein_coding retained_intron MGP_129S1SvImJ_T0041904.1 MGP_129S1SvImJ_G0022124.1 mouse_genomes_project 15 82384142 82387147 + Aco2 protein_coding retained_intron MGP_129S1SvImJ_T0041287.1 MGP_129S1SvImJ_G0021963.1 mouse_genomes_project 15 75942329 75957212 - MGP_129S1SvImJ_P0041287 Eef1d protein_coding protein_coding MGP_129S1SvImJ_T0041288.1 MGP_129S1SvImJ_G0021963.1 mouse_genomes_project 15 75942333 75957197 - MGP_129S1SvImJ_P0041288 Eef1d protein_coding protein_coding MGP_129S1SvImJ_T0041289.1 MGP_129S1SvImJ_G0021963.1 mouse_genomes_project 15 75942333 75957191 - MGP_129S1SvImJ_P0041289 Eef1d protein_coding protein_coding MGP_129S1SvImJ_T0041290.1 MGP_129S1SvImJ_G0021963.1 mouse_genomes_project 15 75943021 75951413 - MGP_129S1SvImJ_P0041290 Eef1d protein_coding protein_coding MGP_129S1SvImJ_T0041291.1 MGP_129S1SvImJ_G0021963.1 mouse_genomes_project 15 75943021 75957154 - MGP_129S1SvImJ_P0041291 Eef1d protein_coding protein_coding MGP_129S1SvImJ_T0041292.1 MGP_129S1SvImJ_G0021963.1 mouse_genomes_project 15 75943021 75957163 - MGP_129S1SvImJ_P0041292 Eef1d protein_coding protein_coding MGP_129S1SvImJ_T0041293.1 MGP_129S1SvImJ_G0021963.1 mouse_genomes_project 15 75943023 75957176 - MGP_129S1SvImJ_P0041293 Eef1d protein_coding protein_coding MGP_129S1SvImJ_T0041294.1 MGP_129S1SvImJ_G0021963.1 mouse_genomes_project 15 75943023 75957192 - MGP_129S1SvImJ_P0041294 Eef1d protein_coding protein_coding MGP_129S1SvImJ_T0041295.1 MGP_129S1SvImJ_G0021963.1 mouse_genomes_project 15 75943025 75944274 - Eef1d protein_coding retained_intron MGP_129S1SvImJ_T0041296.1 MGP_129S1SvImJ_G0021963.1 mouse_genomes_project 15 75943337 75957186 - MGP_129S1SvImJ_P0041296 Eef1d protein_coding protein_coding MGP_129S1SvImJ_T0041297.1 MGP_129S1SvImJ_G0021963.1 mouse_genomes_project 15 75943807 75957413 - MGP_129S1SvImJ_P0041297 Eef1d protein_coding protein_coding MGP_129S1SvImJ_T0041298.1 MGP_129S1SvImJ_G0021963.1 mouse_genomes_project 15 75943814 75957176 - MGP_129S1SvImJ_P0041298 Eef1d protein_coding protein_coding MGP_129S1SvImJ_T0041299.1 MGP_129S1SvImJ_G0021963.1 mouse_genomes_project 15 75943927 75957404 - MGP_129S1SvImJ_P0041299 Eef1d protein_coding protein_coding MGP_129S1SvImJ_T0041300.1 MGP_129S1SvImJ_G0021963.1 mouse_genomes_project 15 75944209 75949112 - Eef1d protein_coding retained_intron MGP_129S1SvImJ_T0041301.1 MGP_129S1SvImJ_G0021963.1 mouse_genomes_project 15 75945639 75957176 - Eef1d protein_coding retained_intron MGP_129S1SvImJ_T0041302.1 MGP_129S1SvImJ_G0021963.1 mouse_genomes_project 15 75950979 75957404 - MGP_129S1SvImJ_P0041302 Eef1d protein_coding protein_coding MGP_129S1SvImJ_T0041303.1 MGP_129S1SvImJ_G0021963.1 mouse_genomes_project 15 75951118 75953220 - MGP_129S1SvImJ_P0041303 Eef1d protein_coding protein_coding MGP_129S1SvImJ_T0041304.1 MGP_129S1SvImJ_G0021963.1 mouse_genomes_project 15 75951362 75957148 - MGP_129S1SvImJ_P0041304 Eef1d protein_coding protein_coding MGP_129S1SvImJ_T0040731.1 MGP_129S1SvImJ_G0021768.1 mouse_genomes_project 15 29848769 29859961 - MGP_129S1SvImJ_P0040731 Cct5 protein_coding protein_coding MGP_129S1SvImJ_T0040732.1 MGP_129S1SvImJ_G0021768.1 mouse_genomes_project 15 29849949 29851028 - Cct5 protein_coding retained_intron MGP_129S1SvImJ_T0040733.1 MGP_129S1SvImJ_G0021768.1 mouse_genomes_project 15 29851463 29852547 - Cct5 protein_coding retained_intron MGP_129S1SvImJ_T0040734.1 MGP_129S1SvImJ_G0021768.1 mouse_genomes_project 15 29852363 29859653 - MGP_129S1SvImJ_P0040734 Cct5 protein_coding protein_coding MGP_129S1SvImJ_T0040735.1 MGP_129S1SvImJ_G0021768.1 mouse_genomes_project 15 29853509 29859854 - Cct5 protein_coding retained_intron MGP_129S1SvImJ_T0098505.1 MGP_129S1SvImJ_G0036590.1 mouse_genomes_project 15 10233663 10233763 + Gm24664 rRNA rRNA MGP_129S1SvImJ_T0040881.1 MGP_129S1SvImJ_G0021819.1 mouse_genomes_project 15 38590250 38596764 + MGP_129S1SvImJ_P0040881 9330182O14Rik protein_coding protein_coding MGP_129S1SvImJ_T0006808.1 MGP_129S1SvImJ_G0005618.1 mouse_genomes_project 15 93707255 93746069 + Gm26760 lincRNA lincRNA MGP_129S1SvImJ_T0042200.1 MGP_129S1SvImJ_G0022224.1 mouse_genomes_project 15 90473222 90501173 - MGP_129S1SvImJ_P0042200 Sbf1 protein_coding protein_coding MGP_129S1SvImJ_T0042201.1 MGP_129S1SvImJ_G0022224.1 mouse_genomes_project 15 90473266 90501117 - MGP_129S1SvImJ_P0042201 Sbf1 protein_coding protein_coding MGP_129S1SvImJ_T0042202.1 MGP_129S1SvImJ_G0022224.1 mouse_genomes_project 15 90473269 90501133 - MGP_129S1SvImJ_P0042202 Sbf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042203.1 MGP_129S1SvImJ_G0022224.1 mouse_genomes_project 15 90473270 90480662 - MGP_129S1SvImJ_P0042203 Sbf1 protein_coding protein_coding MGP_129S1SvImJ_T0042204.1 MGP_129S1SvImJ_G0022224.1 mouse_genomes_project 15 90473539 90473942 - Sbf1 protein_coding retained_intron MGP_129S1SvImJ_T0042205.1 MGP_129S1SvImJ_G0022224.1 mouse_genomes_project 15 90474718 90480175 - Sbf1 protein_coding retained_intron MGP_129S1SvImJ_T0042206.1 MGP_129S1SvImJ_G0022224.1 mouse_genomes_project 15 90480365 90482016 - Sbf1 protein_coding retained_intron MGP_129S1SvImJ_T0042207.1 MGP_129S1SvImJ_G0022224.1 mouse_genomes_project 15 90485617 90486361 - Sbf1 protein_coding retained_intron MGP_129S1SvImJ_T0042208.1 MGP_129S1SvImJ_G0022224.1 mouse_genomes_project 15 90486455 90488531 - Sbf1 protein_coding retained_intron MGP_129S1SvImJ_T0042209.1 MGP_129S1SvImJ_G0022224.1 mouse_genomes_project 15 90488183 90489235 - MGP_129S1SvImJ_P0042209 Sbf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042210.1 MGP_129S1SvImJ_G0022224.1 mouse_genomes_project 15 90488993 90490996 - Sbf1 protein_coding retained_intron MGP_129S1SvImJ_T0042211.1 MGP_129S1SvImJ_G0022224.1 mouse_genomes_project 15 90490788 90492518 - Sbf1 protein_coding retained_intron MGP_129S1SvImJ_T0042212.1 MGP_129S1SvImJ_G0022224.1 mouse_genomes_project 15 90491911 90493701 - MGP_129S1SvImJ_P0042212 Sbf1 protein_coding protein_coding MGP_129S1SvImJ_T0040883.1 MGP_129S1SvImJ_G0021821.1 mouse_genomes_project 15 39957543 40413228 + MGP_129S1SvImJ_P0040883 Oxr1 protein_coding protein_coding MGP_129S1SvImJ_T0040884.1 MGP_129S1SvImJ_G0021821.1 mouse_genomes_project 15 40332090 40413228 + MGP_129S1SvImJ_P0040884 Oxr1 protein_coding protein_coding MGP_129S1SvImJ_T0040885.1 MGP_129S1SvImJ_G0021821.1 mouse_genomes_project 15 40332090 40413233 + MGP_129S1SvImJ_P0040885 Oxr1 protein_coding protein_coding MGP_129S1SvImJ_T0040886.1 MGP_129S1SvImJ_G0021821.1 mouse_genomes_project 15 40332571 40413228 + MGP_129S1SvImJ_P0040886 Oxr1 protein_coding protein_coding MGP_129S1SvImJ_T0040887.1 MGP_129S1SvImJ_G0021821.1 mouse_genomes_project 15 40332579 40413231 + MGP_129S1SvImJ_P0040887 Oxr1 protein_coding protein_coding MGP_129S1SvImJ_T0040888.1 MGP_129S1SvImJ_G0021821.1 mouse_genomes_project 15 40383369 40413228 + MGP_129S1SvImJ_P0040888 Oxr1 protein_coding protein_coding MGP_129S1SvImJ_T0010090.1 MGP_129S1SvImJ_G0008206.1 mouse_genomes_project 15 83120119 83120179 + Gm27924 miRNA miRNA MGP_129S1SvImJ_T0042438.1 MGP_129S1SvImJ_G0022292.1 mouse_genomes_project 15 100025089 100026049 - MGP_129S1SvImJ_P0042438 Olfr285 protein_coding protein_coding MGP_129S1SvImJ_T0003617.1 MGP_129S1SvImJ_G0003279.1 mouse_genomes_project 15 3581090 3634897 - Gm2245 antisense antisense MGP_129S1SvImJ_T0042776.1 MGP_129S1SvImJ_G0022413.1 mouse_genomes_project 15 104631635 104640849 + MGP_129S1SvImJ_P0042776 Amhr2 protein_coding protein_coding MGP_129S1SvImJ_T0042777.1 MGP_129S1SvImJ_G0022413.1 mouse_genomes_project 15 104638381 104640764 + MGP_129S1SvImJ_P0042777 Amhr2 protein_coding protein_coding MGP_129S1SvImJ_T0042778.1 MGP_129S1SvImJ_G0022413.1 mouse_genomes_project 15 104638545 104639094 + Amhr2 protein_coding retained_intron MGP_129S1SvImJ_T0042715.1 MGP_129S1SvImJ_G0022391.1 mouse_genomes_project 15 104019277 104027824 - MGP_129S1SvImJ_P0042715 Krt76 protein_coding protein_coding MGP_129S1SvImJ_T0042019.1 MGP_129S1SvImJ_G0022166.1 mouse_genomes_project 15 84254596 84263512 - MGP_129S1SvImJ_P0042019 Mcat protein_coding protein_coding MGP_129S1SvImJ_T0040989.1 MGP_129S1SvImJ_G0021863.1 mouse_genomes_project 15 57062463 57121394 + MGP_129S1SvImJ_P0040989 Tbc1d31 protein_coding protein_coding MGP_129S1SvImJ_T0040990.1 MGP_129S1SvImJ_G0021863.1 mouse_genomes_project 15 57062498 57110735 + Tbc1d31 protein_coding processed_transcript MGP_129S1SvImJ_T0040991.1 MGP_129S1SvImJ_G0021863.1 mouse_genomes_project 15 57062503 57070213 + MGP_129S1SvImJ_P0040991 Tbc1d31 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040992.1 MGP_129S1SvImJ_G0021863.1 mouse_genomes_project 15 57063269 57110815 + Tbc1d31 protein_coding retained_intron MGP_129S1SvImJ_T0040993.1 MGP_129S1SvImJ_G0021863.1 mouse_genomes_project 15 57064119 57103951 + Tbc1d31 protein_coding retained_intron MGP_129S1SvImJ_T0040994.1 MGP_129S1SvImJ_G0021863.1 mouse_genomes_project 15 57066277 57105264 + Tbc1d31 protein_coding retained_intron MGP_129S1SvImJ_T0040995.1 MGP_129S1SvImJ_G0021863.1 mouse_genomes_project 15 57109745 57121400 + MGP_129S1SvImJ_P0040995 Tbc1d31 protein_coding protein_coding MGP_129S1SvImJ_T0041791.1 MGP_129S1SvImJ_G0022095.1 mouse_genomes_project 15 80496564 80547517 + MGP_129S1SvImJ_P0041791 Mgat3 protein_coding protein_coding MGP_129S1SvImJ_T0042368.1 MGP_129S1SvImJ_G0022271.1 mouse_genomes_project 15 98288584 98300868 - MGP_129S1SvImJ_P0042368 Slc38a2 protein_coding protein_coding MGP_129S1SvImJ_T0003641.1 MGP_129S1SvImJ_G0003296.1 mouse_genomes_project 15 79692957 79697344 + Gm16059 antisense antisense MGP_129S1SvImJ_T0017481.1 MGP_129S1SvImJ_G0015293.1 mouse_genomes_project 15 55835242 55839758 + Has2os processed_transcript antisense MGP_129S1SvImJ_T0017482.1 MGP_129S1SvImJ_G0015293.1 mouse_genomes_project 15 55838849 55930560 + Has2os processed_transcript antisense MGP_129S1SvImJ_T0017483.1 MGP_129S1SvImJ_G0015293.1 mouse_genomes_project 15 55839251 55930276 + Has2os processed_transcript antisense MGP_129S1SvImJ_T0017484.1 MGP_129S1SvImJ_G0015293.1 mouse_genomes_project 15 55916838 55930239 + Has2os processed_transcript lincRNA MGP_129S1SvImJ_T0041794.1 MGP_129S1SvImJ_G0022098.1 mouse_genomes_project 15 80596278 80599951 - MGP_129S1SvImJ_P0041794 Rps19bp1 protein_coding protein_coding MGP_129S1SvImJ_T0041539.1 MGP_129S1SvImJ_G0022021.1 mouse_genomes_project 15 77224337 77469411 - MGP_129S1SvImJ_P0041539 Rbfox2 protein_coding protein_coding MGP_129S1SvImJ_T0041540.1 MGP_129S1SvImJ_G0022021.1 mouse_genomes_project 15 77224338 77303065 - MGP_129S1SvImJ_P0041540 Rbfox2 protein_coding protein_coding MGP_129S1SvImJ_T0041541.1 MGP_129S1SvImJ_G0022021.1 mouse_genomes_project 15 77224338 77469411 - MGP_129S1SvImJ_P0041541 Rbfox2 protein_coding protein_coding MGP_129S1SvImJ_T0041542.1 MGP_129S1SvImJ_G0022021.1 mouse_genomes_project 15 77224338 77303065 - MGP_129S1SvImJ_P0041542 Rbfox2 protein_coding protein_coding MGP_129S1SvImJ_T0040741.1 MGP_129S1SvImJ_G0021772.1 mouse_genomes_project 15 31221760 31337947 + MGP_129S1SvImJ_P0040741 Sdc2 protein_coding protein_coding MGP_129S1SvImJ_T0040742.1 MGP_129S1SvImJ_G0021772.1 mouse_genomes_project 15 31221807 31222334 + Sdc2 protein_coding processed_transcript MGP_129S1SvImJ_T0040532.1 MGP_129S1SvImJ_G0021704.1 mouse_genomes_project 15 5148006 5201480 + MGP_129S1SvImJ_P0040532 Nup155 protein_coding protein_coding MGP_129S1SvImJ_T0006763.1 MGP_129S1SvImJ_G0005589.1 mouse_genomes_project 15 36161094 36184749 + Gm15942 lincRNA lincRNA MGP_129S1SvImJ_T0042255.1 MGP_129S1SvImJ_G0022237.1 mouse_genomes_project 15 90653043 90666034 + MGP_129S1SvImJ_P0042255 Mapk8ip2 protein_coding protein_coding MGP_129S1SvImJ_T0042256.1 MGP_129S1SvImJ_G0022237.1 mouse_genomes_project 15 90656637 90658254 + MGP_129S1SvImJ_P0042256 Mapk8ip2 protein_coding protein_coding MGP_129S1SvImJ_T0006767.1 MGP_129S1SvImJ_G0005593.1 mouse_genomes_project 15 37269388 37423025 - lincRNA lincRNA MGP_129S1SvImJ_T0042510.1 MGP_129S1SvImJ_G0022322.1 mouse_genomes_project 15 100892156 100895279 - MGP_129S1SvImJ_P0042510 C1ql4 protein_coding protein_coding MGP_129S1SvImJ_T0010061.1 MGP_129S1SvImJ_G0008177.1 mouse_genomes_project 15 49771579 49771669 - Mir1907 miRNA miRNA MGP_129S1SvImJ_T0041184.1 MGP_129S1SvImJ_G0021925.1 mouse_genomes_project 15 73522280 73595180 - MGP_129S1SvImJ_P0041184 Mroh5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041185.1 MGP_129S1SvImJ_G0021925.1 mouse_genomes_project 15 73543543 73546123 - Mroh5 protein_coding processed_transcript MGP_129S1SvImJ_T0041186.1 MGP_129S1SvImJ_G0021925.1 mouse_genomes_project 15 73548395 73605141 - MGP_129S1SvImJ_P0041186 Mroh5 protein_coding protein_coding MGP_129S1SvImJ_T0041187.1 MGP_129S1SvImJ_G0021925.1 mouse_genomes_project 15 73548919 73584476 - MGP_129S1SvImJ_P0041187 Mroh5 protein_coding protein_coding MGP_129S1SvImJ_T0041188.1 MGP_129S1SvImJ_G0021925.1 mouse_genomes_project 15 73558646 73605169 - Mroh5 protein_coding retained_intron MGP_129S1SvImJ_T0042170.1 MGP_129S1SvImJ_G0022216.1 mouse_genomes_project 15 90254900 90263971 + MGP_129S1SvImJ_P0042170 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042171.1 MGP_129S1SvImJ_G0022216.1 mouse_genomes_project 15 90254900 90266131 + MGP_129S1SvImJ_P0042171 protein_coding protein_coding MGP_129S1SvImJ_T0040777.1 MGP_129S1SvImJ_G0021784.1 mouse_genomes_project 15 33185825 33190784 + MGP_129S1SvImJ_P0040777 Kcns2 protein_coding protein_coding MGP_129S1SvImJ_T0040709.1 MGP_129S1SvImJ_G0021756.1 mouse_genomes_project 15 25676308 25701150 - MGP_129S1SvImJ_P0040709 Otulin protein_coding protein_coding MGP_129S1SvImJ_T0042029.1 MGP_129S1SvImJ_G0022170.1 mouse_genomes_project 15 84512504 84525172 + MGP_129S1SvImJ_P0042029 Mpped1 protein_coding protein_coding MGP_129S1SvImJ_T0042030.1 MGP_129S1SvImJ_G0022170.1 mouse_genomes_project 15 84521918 84598267 + MGP_129S1SvImJ_P0042030 Mpped1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042031.1 MGP_129S1SvImJ_G0022170.1 mouse_genomes_project 15 84524979 84596087 + MGP_129S1SvImJ_P0042031 Mpped1 protein_coding protein_coding MGP_129S1SvImJ_T0042032.1 MGP_129S1SvImJ_G0022170.1 mouse_genomes_project 15 84525054 84596183 + MGP_129S1SvImJ_P0042032 Mpped1 protein_coding protein_coding MGP_129S1SvImJ_T0042033.1 MGP_129S1SvImJ_G0022170.1 mouse_genomes_project 15 84525075 84598261 + MGP_129S1SvImJ_P0042033 Mpped1 protein_coding protein_coding MGP_129S1SvImJ_T0042034.1 MGP_129S1SvImJ_G0022170.1 mouse_genomes_project 15 84529632 84591850 + MGP_129S1SvImJ_P0042034 Mpped1 protein_coding protein_coding MGP_129S1SvImJ_T0042035.1 MGP_129S1SvImJ_G0022170.1 mouse_genomes_project 15 84533088 84596068 + MGP_129S1SvImJ_P0042035 Mpped1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042036.1 MGP_129S1SvImJ_G0022170.1 mouse_genomes_project 15 84572142 84596088 + MGP_129S1SvImJ_P0042036 Mpped1 protein_coding protein_coding MGP_129S1SvImJ_T0042037.1 MGP_129S1SvImJ_G0022170.1 mouse_genomes_project 15 84572175 84594296 + MGP_129S1SvImJ_P0042037 Mpped1 protein_coding protein_coding MGP_129S1SvImJ_T0100726.1 MGP_129S1SvImJ_G0038793.1 mouse_genomes_project 15 21057394 21057526 + Gm24656 snoRNA snoRNA MGP_129S1SvImJ_T0042511.1 MGP_129S1SvImJ_G0022323.1 mouse_genomes_project 15 100900617 100909432 + Dnajc22 protein_coding processed_transcript MGP_129S1SvImJ_T0042512.1 MGP_129S1SvImJ_G0022323.1 mouse_genomes_project 15 100907922 100913100 + MGP_129S1SvImJ_P0042512 Dnajc22 protein_coding protein_coding MGP_129S1SvImJ_T0099459.1 MGP_129S1SvImJ_G0037526.1 mouse_genomes_project 15 62888151 62888214 - Gm25702 snRNA snRNA MGP_129S1SvImJ_T0040758.1 MGP_129S1SvImJ_G0021778.1 mouse_genomes_project 15 32647423 32654752 - MGP_129S1SvImJ_P0040758 9430069I07Rik protein_coding protein_coding MGP_129S1SvImJ_T0006812.1 MGP_129S1SvImJ_G0005620.1 mouse_genomes_project 15 97691793 97857975 - 2610037D02Rik lincRNA lincRNA MGP_129S1SvImJ_T0006816.1 MGP_129S1SvImJ_G0005620.1 mouse_genomes_project 15 97855865 97858862 - 2610037D02Rik lincRNA lincRNA MGP_129S1SvImJ_T0041896.1 MGP_129S1SvImJ_G0022122.1 mouse_genomes_project 15 82317321 82327373 - MGP_129S1SvImJ_P0041896 Tob2 protein_coding protein_coding MGP_129S1SvImJ_T0041276.1 MGP_129S1SvImJ_G0021957.1 mouse_genomes_project 15 75731289 75741413 + MGP_129S1SvImJ_P0041276 Rhpn1 protein_coding protein_coding MGP_129S1SvImJ_T0041277.1 MGP_129S1SvImJ_G0021957.1 mouse_genomes_project 15 75731317 75741415 + Rhpn1 protein_coding retained_intron MGP_129S1SvImJ_T0041278.1 MGP_129S1SvImJ_G0021957.1 mouse_genomes_project 15 75731327 75741410 + Rhpn1 protein_coding retained_intron MGP_129S1SvImJ_T0041279.1 MGP_129S1SvImJ_G0021957.1 mouse_genomes_project 15 75731338 75741413 + MGP_129S1SvImJ_P0041279 Rhpn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041280.1 MGP_129S1SvImJ_G0021957.1 mouse_genomes_project 15 75731403 75741230 + MGP_129S1SvImJ_P0041280 Rhpn1 protein_coding protein_coding MGP_129S1SvImJ_T0041974.1 MGP_129S1SvImJ_G0022156.1 mouse_genomes_project 15 83644895 83671354 - MGP_129S1SvImJ_P0041974 Nfam1 protein_coding protein_coding MGP_129S1SvImJ_T0041975.1 MGP_129S1SvImJ_G0022156.1 mouse_genomes_project 15 83644910 83688355 - MGP_129S1SvImJ_P0041975 Nfam1 protein_coding protein_coding MGP_129S1SvImJ_T0003662.1 MGP_129S1SvImJ_G0003314.1 mouse_genomes_project 15 102558605 102568233 + antisense antisense MGP_129S1SvImJ_T0041948.1 MGP_129S1SvImJ_G0022140.1 mouse_genomes_project 15 82783543 82804715 + MGP_129S1SvImJ_P0041948 Sept3 protein_coding protein_coding MGP_129S1SvImJ_T0041949.1 MGP_129S1SvImJ_G0022140.1 mouse_genomes_project 15 82783855 82802331 + MGP_129S1SvImJ_P0041949 Sept3 protein_coding protein_coding MGP_129S1SvImJ_T0041940.1 MGP_129S1SvImJ_G0022134.1 mouse_genomes_project 15 82616204 82631908 + MGP_129S1SvImJ_P0041940 Ccdc134 protein_coding protein_coding MGP_129S1SvImJ_T0042435.1 MGP_129S1SvImJ_G0022290.1 mouse_genomes_project 15 99957800 99959126 - MGP_129S1SvImJ_P0042435 H1fnt protein_coding protein_coding MGP_129S1SvImJ_T0040605.1 MGP_129S1SvImJ_G0021722.1 mouse_genomes_project 15 7613623 7624730 - MGP_129S1SvImJ_P0040605 Brix1 protein_coding protein_coding MGP_129S1SvImJ_T0040606.1 MGP_129S1SvImJ_G0021722.1 mouse_genomes_project 15 7617554 7624170 - MGP_129S1SvImJ_P0040606 Brix1 protein_coding protein_coding MGP_129S1SvImJ_T0040607.1 MGP_129S1SvImJ_G0021722.1 mouse_genomes_project 15 7617925 7624692 - MGP_129S1SvImJ_P0040607 Brix1 protein_coding protein_coding MGP_129S1SvImJ_T0040608.1 MGP_129S1SvImJ_G0021722.1 mouse_genomes_project 15 7618370 7624670 - MGP_129S1SvImJ_P0040608 Brix1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0011410.1 MGP_129S1SvImJ_G0009526.1 mouse_genomes_project 15 61459936 61460022 + Gm27718 misc_RNA misc_RNA MGP_129S1SvImJ_T0003634.1 MGP_129S1SvImJ_G0003293.1 mouse_genomes_project 15 75685062 75687185 + Gm15945 antisense antisense MGP_129S1SvImJ_T0042481.1 MGP_129S1SvImJ_G0022308.1 mouse_genomes_project 15 100474565 100480541 - MGP_129S1SvImJ_P0042481 Fkbp11 protein_coding protein_coding MGP_129S1SvImJ_T0013127.1 MGP_129S1SvImJ_G0011216.1 mouse_genomes_project 15 101063056 101070395 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003655.1 MGP_129S1SvImJ_G0003308.1 mouse_genomes_project 15 101270988 101280296 + Nckap5los antisense antisense MGP_129S1SvImJ_T0099439.1 MGP_129S1SvImJ_G0037506.1 mouse_genomes_project 15 18860813 18860920 + Gm25101 snRNA snRNA MGP_129S1SvImJ_T0041281.1 MGP_129S1SvImJ_G0021958.1 mouse_genomes_project 15 75773840 75774920 - MGP_129S1SvImJ_P0041281 Mafa protein_coding protein_coding MGP_129S1SvImJ_T0041251.1 MGP_129S1SvImJ_G0021948.1 mouse_genomes_project 15 75047535 75049969 + MGP_129S1SvImJ_P0041251 protein_coding protein_coding MGP_129S1SvImJ_T0100760.1 MGP_129S1SvImJ_G0038827.1 mouse_genomes_project 15 96485102 96485234 - Gm23129 snoRNA snoRNA MGP_129S1SvImJ_T0040841.1 MGP_129S1SvImJ_G0021804.1 mouse_genomes_project 15 36394878 36445913 - MGP_129S1SvImJ_P0040841 Rrm2b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040842.1 MGP_129S1SvImJ_G0021804.1 mouse_genomes_project 15 36394878 36445913 - MGP_129S1SvImJ_P0040842 Rrm2b protein_coding protein_coding MGP_129S1SvImJ_T0040843.1 MGP_129S1SvImJ_G0021804.1 mouse_genomes_project 15 36394878 36445913 - MGP_129S1SvImJ_P0040843 Rrm2b protein_coding protein_coding MGP_129S1SvImJ_T0040844.1 MGP_129S1SvImJ_G0021804.1 mouse_genomes_project 15 36407868 36445913 - MGP_129S1SvImJ_P0040844 Rrm2b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040845.1 MGP_129S1SvImJ_G0021804.1 mouse_genomes_project 15 36414204 36445951 - MGP_129S1SvImJ_P0040845 Rrm2b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040846.1 MGP_129S1SvImJ_G0021804.1 mouse_genomes_project 15 36429336 36440143 - Rrm2b protein_coding retained_intron MGP_129S1SvImJ_T0040847.1 MGP_129S1SvImJ_G0021804.1 mouse_genomes_project 15 36429441 36445871 - MGP_129S1SvImJ_P0040847 Rrm2b protein_coding protein_coding MGP_129S1SvImJ_T0040848.1 MGP_129S1SvImJ_G0021804.1 mouse_genomes_project 15 36431040 36446374 - MGP_129S1SvImJ_P0040848 Rrm2b protein_coding protein_coding MGP_129S1SvImJ_T0006804.1 MGP_129S1SvImJ_G0005614.1 mouse_genomes_project 15 86464367 86476933 + AU022754 lincRNA lincRNA MGP_129S1SvImJ_T0100750.1 MGP_129S1SvImJ_G0038817.1 mouse_genomes_project 15 62165934 62166068 + Gm22521 snoRNA snoRNA MGP_129S1SvImJ_T0042643.1 MGP_129S1SvImJ_G0022361.1 mouse_genomes_project 15 102753304 102768306 + MGP_129S1SvImJ_P0042643 Slc4a8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042644.1 MGP_129S1SvImJ_G0022361.1 mouse_genomes_project 15 102753323 102768186 + Slc4a8 protein_coding retained_intron MGP_129S1SvImJ_T0042645.1 MGP_129S1SvImJ_G0022361.1 mouse_genomes_project 15 102753365 102817559 + MGP_129S1SvImJ_P0042645 Slc4a8 protein_coding protein_coding MGP_129S1SvImJ_T0042646.1 MGP_129S1SvImJ_G0022361.1 mouse_genomes_project 15 102800914 102804457 + Slc4a8 protein_coding retained_intron MGP_129S1SvImJ_T0042647.1 MGP_129S1SvImJ_G0022361.1 mouse_genomes_project 15 102810361 102814210 + Slc4a8 protein_coding processed_transcript MGP_129S1SvImJ_T0042648.1 MGP_129S1SvImJ_G0022361.1 mouse_genomes_project 15 102812534 102813981 + Slc4a8 protein_coding retained_intron MGP_129S1SvImJ_T0040756.1 MGP_129S1SvImJ_G0021777.1 mouse_genomes_project 15 32599002 32740177 + MGP_129S1SvImJ_P0040756 protein_coding protein_coding MGP_129S1SvImJ_T0040757.1 MGP_129S1SvImJ_G0021777.1 mouse_genomes_project 15 32599003 32740181 + MGP_129S1SvImJ_P0040757 protein_coding protein_coding MGP_129S1SvImJ_T0100762.1 MGP_129S1SvImJ_G0038829.1 mouse_genomes_project 15 100250809 100250947 - Snora34 snoRNA snoRNA MGP_129S1SvImJ_T0017501.1 MGP_129S1SvImJ_G0015304.1 mouse_genomes_project 15 79572638 79574002 + Gm20420 processed_transcript processed_transcript MGP_129S1SvImJ_T0040828.1 MGP_129S1SvImJ_G0021802.1 mouse_genomes_project 15 35811655 36263057 - MGP_129S1SvImJ_P0040828 Ncald protein_coding protein_coding MGP_129S1SvImJ_T0040829.1 MGP_129S1SvImJ_G0021802.1 mouse_genomes_project 15 35811655 36263490 - MGP_129S1SvImJ_P0040829 Ncald protein_coding protein_coding MGP_129S1SvImJ_T0040830.1 MGP_129S1SvImJ_G0021802.1 mouse_genomes_project 15 35811698 35909687 - MGP_129S1SvImJ_P0040830 Ncald protein_coding protein_coding MGP_129S1SvImJ_T0040831.1 MGP_129S1SvImJ_G0021802.1 mouse_genomes_project 15 35811747 35909676 - MGP_129S1SvImJ_P0040831 Ncald protein_coding protein_coding MGP_129S1SvImJ_T0040832.1 MGP_129S1SvImJ_G0021802.1 mouse_genomes_project 15 35814104 35908868 - MGP_129S1SvImJ_P0040832 Ncald protein_coding protein_coding MGP_129S1SvImJ_T0040833.1 MGP_129S1SvImJ_G0021802.1 mouse_genomes_project 15 35814368 36198522 - MGP_129S1SvImJ_P0040833 Ncald protein_coding protein_coding MGP_129S1SvImJ_T0040834.1 MGP_129S1SvImJ_G0021802.1 mouse_genomes_project 15 35817592 36263057 - MGP_129S1SvImJ_P0040834 Ncald protein_coding protein_coding MGP_129S1SvImJ_T0040835.1 MGP_129S1SvImJ_G0021802.1 mouse_genomes_project 15 35825878 35909659 - Ncald protein_coding processed_transcript MGP_129S1SvImJ_T0040836.1 MGP_129S1SvImJ_G0021802.1 mouse_genomes_project 15 35844710 36263627 - MGP_129S1SvImJ_P0040836 Ncald protein_coding protein_coding MGP_129S1SvImJ_T0040838.1 MGP_129S1SvImJ_G0021802.1 mouse_genomes_project 15 35882337 36198223 - Ncald protein_coding processed_transcript MGP_129S1SvImJ_T0040839.1 MGP_129S1SvImJ_G0021802.1 mouse_genomes_project 15 36080116 36198522 - Ncald protein_coding processed_transcript MGP_129S1SvImJ_T0040840.1 MGP_129S1SvImJ_G0021802.1 mouse_genomes_project 15 36081483 36263296 - Ncald protein_coding processed_transcript MGP_129S1SvImJ_T0010068.1 MGP_129S1SvImJ_G0008184.1 mouse_genomes_project 15 76116889 76116950 - Mir6952 miRNA miRNA MGP_129S1SvImJ_T0017485.1 MGP_129S1SvImJ_G0015294.1 mouse_genomes_project 15 57376638 57493226 + Gm15943 processed_transcript processed_transcript MGP_129S1SvImJ_T0100728.1 MGP_129S1SvImJ_G0038795.1 mouse_genomes_project 15 28077389 28077523 - Gm23033 snoRNA snoRNA MGP_129S1SvImJ_T0040647.1 MGP_129S1SvImJ_G0021737.1 mouse_genomes_project 15 9556333 9589358 + MGP_129S1SvImJ_P0040647 Golph3 protein_coding protein_coding MGP_129S1SvImJ_T0041578.1 MGP_129S1SvImJ_G0022036.1 mouse_genomes_project 15 78321842 78336462 - MGP_129S1SvImJ_P0041578 Ift27 protein_coding protein_coding MGP_129S1SvImJ_T0013115.1 MGP_129S1SvImJ_G0011204.1 mouse_genomes_project 15 81344711 81345106 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013094.1 MGP_129S1SvImJ_G0011183.1 mouse_genomes_project 15 41799926 41800938 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003629.1 MGP_129S1SvImJ_G0003289.1 mouse_genomes_project 15 66453027 66454528 + Gm17035 antisense antisense MGP_129S1SvImJ_T0040837.1 MGP_129S1SvImJ_G0021803.1 mouse_genomes_project 15 35875467 35890552 + MGP_129S1SvImJ_P0040837 4930447A16Rik protein_coding protein_coding MGP_129S1SvImJ_T0041802.1 MGP_129S1SvImJ_G0022100.1 mouse_genomes_project 15 80801316 80919696 - MGP_129S1SvImJ_P0041802 Enthd1 protein_coding protein_coding MGP_129S1SvImJ_T0042213.1 MGP_129S1SvImJ_G0022225.1 mouse_genomes_project 15 90509159 90510916 + MGP_129S1SvImJ_P0042213 Adm2 protein_coding protein_coding MGP_129S1SvImJ_T0003656.1 MGP_129S1SvImJ_G0003309.1 mouse_genomes_project 15 101592409 101601298 - Gm16537 antisense antisense MGP_129S1SvImJ_T0010118.1 MGP_129S1SvImJ_G0008234.1 mouse_genomes_project 15 105250212 105250304 + Mir615 miRNA miRNA MGP_129S1SvImJ_T0040625.1 MGP_129S1SvImJ_G0021730.1 mouse_genomes_project 15 8238384 8524390 + MGP_129S1SvImJ_P0040625 Adamts12 protein_coding protein_coding MGP_129S1SvImJ_T0041212.1 MGP_129S1SvImJ_G0021933.1 mouse_genomes_project 15 74506775 74510572 - MGP_129S1SvImJ_P0041212 Slurp1 protein_coding protein_coding MGP_129S1SvImJ_T0041213.1 MGP_129S1SvImJ_G0021933.1 mouse_genomes_project 15 74509203 74510552 - MGP_129S1SvImJ_P0041213 Slurp1 protein_coding protein_coding MGP_129S1SvImJ_T0099462.1 MGP_129S1SvImJ_G0037529.1 mouse_genomes_project 15 68235478 68235585 + Gm25987 snRNA snRNA MGP_129S1SvImJ_T0042867.1 MGP_129S1SvImJ_G0022441.1 mouse_genomes_project 15 105676244 105697726 - MGP_129S1SvImJ_P0042867 Gtsf1 protein_coding protein_coding MGP_129S1SvImJ_T0042868.1 MGP_129S1SvImJ_G0022441.1 mouse_genomes_project 15 105676297 105695862 - MGP_129S1SvImJ_P0042868 Gtsf1 protein_coding protein_coding MGP_129S1SvImJ_T0042869.1 MGP_129S1SvImJ_G0022441.1 mouse_genomes_project 15 105676297 105695756 - MGP_129S1SvImJ_P0042869 Gtsf1 protein_coding protein_coding MGP_129S1SvImJ_T0042870.1 MGP_129S1SvImJ_G0022441.1 mouse_genomes_project 15 105676300 105696818 - MGP_129S1SvImJ_P0042870 Gtsf1 protein_coding protein_coding MGP_129S1SvImJ_T0042871.1 MGP_129S1SvImJ_G0022441.1 mouse_genomes_project 15 105676322 105697605 - MGP_129S1SvImJ_P0042871 Gtsf1 protein_coding protein_coding MGP_129S1SvImJ_T0042872.1 MGP_129S1SvImJ_G0022441.1 mouse_genomes_project 15 105676334 105697600 - MGP_129S1SvImJ_P0042872 Gtsf1 protein_coding protein_coding MGP_129S1SvImJ_T0042873.1 MGP_129S1SvImJ_G0022441.1 mouse_genomes_project 15 105676353 105697635 - MGP_129S1SvImJ_P0042873 Gtsf1 protein_coding protein_coding MGP_129S1SvImJ_T0042874.1 MGP_129S1SvImJ_G0022441.1 mouse_genomes_project 15 105683571 105697665 - MGP_129S1SvImJ_P0042874 Gtsf1 protein_coding protein_coding MGP_129S1SvImJ_T0042875.1 MGP_129S1SvImJ_G0022441.1 mouse_genomes_project 15 105686105 105697500 - MGP_129S1SvImJ_P0042875 Gtsf1 protein_coding protein_coding MGP_129S1SvImJ_T0041019.1 MGP_129S1SvImJ_G0021873.1 mouse_genomes_project 15 57601889 57641815 + MGP_129S1SvImJ_P0041019 Fam91a1 protein_coding protein_coding MGP_129S1SvImJ_T0042087.1 MGP_129S1SvImJ_G0022188.1 mouse_genomes_project 15 85893264 85969221 - MGP_129S1SvImJ_P0042087 Smc1b protein_coding protein_coding MGP_129S1SvImJ_T0041722.1 MGP_129S1SvImJ_G0022077.1 mouse_genomes_project 15 79805395 79824286 - MGP_129S1SvImJ_P0041722 Ddx17 protein_coding protein_coding MGP_129S1SvImJ_T0040740.1 MGP_129S1SvImJ_G0021771.1 mouse_genomes_project 15 30547958 31013422 + MGP_129S1SvImJ_P0040740 Sema5a protein_coding protein_coding MGP_129S1SvImJ_T0013129.1 MGP_129S1SvImJ_G0011218.1 mouse_genomes_project 15 101697968 101698262 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0042697.1 MGP_129S1SvImJ_G0022374.1 mouse_genomes_project 15 103527470 103531822 - MGP_129S1SvImJ_P0042697 Krt81 protein_coding protein_coding MGP_129S1SvImJ_T0006800.1 MGP_129S1SvImJ_G0005613.1 mouse_genomes_project 15 84053798 84064962 - 1700001L05Rik lincRNA lincRNA MGP_129S1SvImJ_T0006801.1 MGP_129S1SvImJ_G0005613.1 mouse_genomes_project 15 84053806 84064691 - 1700001L05Rik lincRNA lincRNA MGP_129S1SvImJ_T0006802.1 MGP_129S1SvImJ_G0005613.1 mouse_genomes_project 15 84053832 84064957 - 1700001L05Rik lincRNA lincRNA MGP_129S1SvImJ_T0006803.1 MGP_129S1SvImJ_G0005613.1 mouse_genomes_project 15 84054890 84062818 - 1700001L05Rik lincRNA lincRNA MGP_129S1SvImJ_T0100756.1 MGP_129S1SvImJ_G0038823.1 mouse_genomes_project 15 80385080 80385174 - Snord83b snoRNA snoRNA MGP_129S1SvImJ_T0013117.1 MGP_129S1SvImJ_G0011206.1 mouse_genomes_project 15 82458294 82460497 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0040849.1 MGP_129S1SvImJ_G0021805.1 mouse_genomes_project 15 36453449 36569006 - MGP_129S1SvImJ_P0040849 Ubr5 protein_coding protein_coding MGP_129S1SvImJ_T0040850.1 MGP_129S1SvImJ_G0021805.1 mouse_genomes_project 15 36454415 36568571 - MGP_129S1SvImJ_P0040850 Ubr5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042852.1 MGP_129S1SvImJ_G0022435.1 mouse_genomes_project 15 105492608 105497212 + MGP_129S1SvImJ_P0042852 Hnrnpa1 protein_coding protein_coding MGP_129S1SvImJ_T0099434.1 MGP_129S1SvImJ_G0037501.1 mouse_genomes_project 15 465666 465792 - Gm22031 snRNA snRNA MGP_129S1SvImJ_T0040968.1 MGP_129S1SvImJ_G0021856.1 mouse_genomes_project 15 54622678 54646665 - MGP_129S1SvImJ_P0040968 Mrpl13 protein_coding protein_coding MGP_129S1SvImJ_T0040969.1 MGP_129S1SvImJ_G0021856.1 mouse_genomes_project 15 54622678 54646266 - MGP_129S1SvImJ_P0040969 Mrpl13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040970.1 MGP_129S1SvImJ_G0021856.1 mouse_genomes_project 15 54627220 54636749 - MGP_129S1SvImJ_P0040970 Mrpl13 protein_coding protein_coding MGP_129S1SvImJ_T0040971.1 MGP_129S1SvImJ_G0021856.1 mouse_genomes_project 15 54631455 54646200 - Mrpl13 protein_coding retained_intron MGP_129S1SvImJ_T0040972.1 MGP_129S1SvImJ_G0021856.1 mouse_genomes_project 15 54638032 54646192 - Mrpl13 protein_coding retained_intron MGP_129S1SvImJ_T0013126.1 MGP_129S1SvImJ_G0011215.1 mouse_genomes_project 15 94662993 94663363 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0040530.1 MGP_129S1SvImJ_G0021702.1 mouse_genomes_project 15 4837558 4870944 + MGP_129S1SvImJ_P0040530 Gdnf protein_coding protein_coding MGP_129S1SvImJ_T0041231.1 MGP_129S1SvImJ_G0021944.1 mouse_genomes_project 15 74677659 74702921 - 2010109I03Rik protein_coding processed_transcript MGP_129S1SvImJ_T0041232.1 MGP_129S1SvImJ_G0021944.1 mouse_genomes_project 15 74679097 74683856 - MGP_129S1SvImJ_P0041232 2010109I03Rik protein_coding protein_coding MGP_129S1SvImJ_T0040813.1 MGP_129S1SvImJ_G0021798.1 mouse_genomes_project 15 35187195 35212449 - MGP_129S1SvImJ_P0040813 protein_coding protein_coding MGP_129S1SvImJ_T0040814.1 MGP_129S1SvImJ_G0021798.1 mouse_genomes_project 15 35187988 35212442 - MGP_129S1SvImJ_P0040814 protein_coding protein_coding MGP_129S1SvImJ_T0040815.1 MGP_129S1SvImJ_G0021798.1 mouse_genomes_project 15 35188123 35211747 - MGP_129S1SvImJ_P0040815 protein_coding protein_coding MGP_129S1SvImJ_T0040816.1 MGP_129S1SvImJ_G0021798.1 mouse_genomes_project 15 35189528 35211703 - MGP_129S1SvImJ_P0040816 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040817.1 MGP_129S1SvImJ_G0021798.1 mouse_genomes_project 15 35192881 35211429 - protein_coding retained_intron MGP_129S1SvImJ_T0040818.1 MGP_129S1SvImJ_G0021798.1 mouse_genomes_project 15 35208612 35210324 - MGP_129S1SvImJ_P0040818 protein_coding protein_coding MGP_129S1SvImJ_T0040819.1 MGP_129S1SvImJ_G0021798.1 mouse_genomes_project 15 35208745 35211120 - MGP_129S1SvImJ_P0040819 protein_coding protein_coding MGP_129S1SvImJ_T0040820.1 MGP_129S1SvImJ_G0021798.1 mouse_genomes_project 15 35208800 35212458 - MGP_129S1SvImJ_P0040820 protein_coding protein_coding MGP_129S1SvImJ_T0010055.1 MGP_129S1SvImJ_G0008171.1 mouse_genomes_project 15 35216636 35216710 - Gm25303 miRNA miRNA MGP_129S1SvImJ_T0042689.1 MGP_129S1SvImJ_G0022371.1 mouse_genomes_project 15 103473008 103473949 + Krt7 protein_coding processed_transcript MGP_129S1SvImJ_T0042690.1 MGP_129S1SvImJ_G0022371.1 mouse_genomes_project 15 103473017 103474361 + Krt7 protein_coding processed_transcript MGP_129S1SvImJ_T0042691.1 MGP_129S1SvImJ_G0022371.1 mouse_genomes_project 15 103473017 103491123 + Krt7 protein_coding processed_transcript MGP_129S1SvImJ_T0042692.1 MGP_129S1SvImJ_G0022371.1 mouse_genomes_project 15 103473068 103481441 + MGP_129S1SvImJ_P0042692 Krt7 protein_coding protein_coding MGP_129S1SvImJ_T0042693.1 MGP_129S1SvImJ_G0022371.1 mouse_genomes_project 15 103474367 103493839 + MGP_129S1SvImJ_P0042693 Krt7 protein_coding protein_coding MGP_129S1SvImJ_T0042694.1 MGP_129S1SvImJ_G0022371.1 mouse_genomes_project 15 103474414 103491301 + Krt7 protein_coding retained_intron MGP_129S1SvImJ_T0013091.1 MGP_129S1SvImJ_G0011180.1 mouse_genomes_project 15 37600072 37601000 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0042197.1 MGP_129S1SvImJ_G0022222.1 mouse_genomes_project 15 90358084 90372528 - MGP_129S1SvImJ_P0042197 Dennd6b protein_coding protein_coding MGP_129S1SvImJ_T0003650.1 MGP_129S1SvImJ_G0003303.1 mouse_genomes_project 15 99430092 99436527 + Rapgef3os1 antisense antisense MGP_129S1SvImJ_T0010060.1 MGP_129S1SvImJ_G0008176.1 mouse_genomes_project 15 45122152 45122214 - Gm23562 miRNA miRNA MGP_129S1SvImJ_T0003658.1 MGP_129S1SvImJ_G0003311.1 mouse_genomes_project 15 101706578 101724534 + Gm17057 antisense antisense MGP_129S1SvImJ_T0040550.1 MGP_129S1SvImJ_G0021709.1 mouse_genomes_project 15 6080633 6145682 + MGP_129S1SvImJ_P0040550 Ranbp3l protein_coding protein_coding MGP_129S1SvImJ_T0040551.1 MGP_129S1SvImJ_G0021709.1 mouse_genomes_project 15 6080633 6118698 + MGP_129S1SvImJ_P0040551 Ranbp3l protein_coding protein_coding MGP_129S1SvImJ_T0040552.1 MGP_129S1SvImJ_G0021709.1 mouse_genomes_project 15 6080633 6144160 + MGP_129S1SvImJ_P0040552 Ranbp3l protein_coding unknown_likely_coding MGP_129S1SvImJ_T0041107.1 MGP_129S1SvImJ_G0021904.1 mouse_genomes_project 15 65883703 66003815 - MGP_129S1SvImJ_P0041107 Lrrc6 protein_coding protein_coding MGP_129S1SvImJ_T0017491.1 MGP_129S1SvImJ_G0015297.1 mouse_genomes_project 15 65354771 65355259 + Gm20405 processed_transcript processed_transcript MGP_129S1SvImJ_T0042595.1 MGP_129S1SvImJ_G0022348.1 mouse_genomes_project 15 102155296 102183527 + MGP_129S1SvImJ_P0042595 Atf1 protein_coding protein_coding MGP_129S1SvImJ_T0042596.1 MGP_129S1SvImJ_G0022348.1 mouse_genomes_project 15 102155378 102200337 + MGP_129S1SvImJ_P0042596 Atf1 protein_coding protein_coding MGP_129S1SvImJ_T0042597.1 MGP_129S1SvImJ_G0022348.1 mouse_genomes_project 15 102156828 102161437 + MGP_129S1SvImJ_P0042597 Atf1 protein_coding protein_coding MGP_129S1SvImJ_T0042598.1 MGP_129S1SvImJ_G0022348.1 mouse_genomes_project 15 102160781 102180643 + MGP_129S1SvImJ_P0042598 Atf1 protein_coding protein_coding MGP_129S1SvImJ_T0042599.1 MGP_129S1SvImJ_G0022348.1 mouse_genomes_project 15 102160793 102161636 + Atf1 protein_coding retained_intron MGP_129S1SvImJ_T0042600.1 MGP_129S1SvImJ_G0022348.1 mouse_genomes_project 15 102160820 102183463 + MGP_129S1SvImJ_P0042600 Atf1 protein_coding protein_coding MGP_129S1SvImJ_T0042601.1 MGP_129S1SvImJ_G0022348.1 mouse_genomes_project 15 102161355 102199008 + MGP_129S1SvImJ_P0042601 Atf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042602.1 MGP_129S1SvImJ_G0022348.1 mouse_genomes_project 15 102161373 102199051 + Atf1 protein_coding processed_transcript MGP_129S1SvImJ_T0042603.1 MGP_129S1SvImJ_G0022348.1 mouse_genomes_project 15 102183293 102198840 + MGP_129S1SvImJ_P0042603 Atf1 protein_coding protein_coding MGP_129S1SvImJ_T0040821.1 MGP_129S1SvImJ_G0021799.1 mouse_genomes_project 15 35292369 35301686 - MGP_129S1SvImJ_P0040821 Gm10384 protein_coding protein_coding MGP_129S1SvImJ_T0041452.1 MGP_129S1SvImJ_G0021997.1 mouse_genomes_project 15 76614887 76617904 - MGP_129S1SvImJ_P0041452 Fbxl6 protein_coding protein_coding MGP_129S1SvImJ_T0041104.1 MGP_129S1SvImJ_G0021903.1 mouse_genomes_project 15 65487278 65784477 - MGP_129S1SvImJ_P0041104 Kcnq3 protein_coding protein_coding MGP_129S1SvImJ_T0041105.1 MGP_129S1SvImJ_G0021903.1 mouse_genomes_project 15 65526384 65603006 - Kcnq3 protein_coding processed_transcript MGP_129S1SvImJ_T0041106.1 MGP_129S1SvImJ_G0021903.1 mouse_genomes_project 15 65781325 65784304 - Kcnq3 protein_coding retained_intron MGP_129S1SvImJ_T0041612.1 MGP_129S1SvImJ_G0022049.1 mouse_genomes_project 15 78805094 78830028 + MGP_129S1SvImJ_P0041612 Cyth4 protein_coding protein_coding MGP_129S1SvImJ_T0041581.1 MGP_129S1SvImJ_G0022038.1 mouse_genomes_project 15 78410216 78427489 + MGP_129S1SvImJ_P0041581 Ncf4 protein_coding protein_coding MGP_129S1SvImJ_T0041582.1 MGP_129S1SvImJ_G0022038.1 mouse_genomes_project 15 78410259 78425897 + MGP_129S1SvImJ_P0041582 Ncf4 protein_coding protein_coding MGP_129S1SvImJ_T0041583.1 MGP_129S1SvImJ_G0022038.1 mouse_genomes_project 15 78418435 78421434 + Ncf4 protein_coding retained_intron MGP_129S1SvImJ_T0041584.1 MGP_129S1SvImJ_G0022038.1 mouse_genomes_project 15 78418649 78425672 + Ncf4 protein_coding processed_transcript MGP_129S1SvImJ_T0041585.1 MGP_129S1SvImJ_G0022038.1 mouse_genomes_project 15 78420855 78425705 + Ncf4 protein_coding retained_intron MGP_129S1SvImJ_T0041586.1 MGP_129S1SvImJ_G0022038.1 mouse_genomes_project 15 78425780 78427484 + Ncf4 protein_coding retained_intron MGP_129S1SvImJ_T0042751.1 MGP_129S1SvImJ_G0022408.1 mouse_genomes_project 15 104497047 104502219 + Pfdn5 protein_coding retained_intron MGP_129S1SvImJ_T0042752.1 MGP_129S1SvImJ_G0022408.1 mouse_genomes_project 15 104497068 104502160 + MGP_129S1SvImJ_P0042752 Pfdn5 protein_coding protein_coding MGP_129S1SvImJ_T0042753.1 MGP_129S1SvImJ_G0022408.1 mouse_genomes_project 15 104497068 104502297 + MGP_129S1SvImJ_P0042753 Pfdn5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042754.1 MGP_129S1SvImJ_G0022408.1 mouse_genomes_project 15 104497068 104502306 + MGP_129S1SvImJ_P0042754 Pfdn5 protein_coding protein_coding MGP_129S1SvImJ_T0042755.1 MGP_129S1SvImJ_G0022408.1 mouse_genomes_project 15 104497270 104502273 + MGP_129S1SvImJ_P0042755 Pfdn5 protein_coding protein_coding MGP_129S1SvImJ_T0041720.1 MGP_129S1SvImJ_G0022075.1 mouse_genomes_project 15 79758536 79783037 - MGP_129S1SvImJ_P0041720 Kcnj4 protein_coding protein_coding MGP_129S1SvImJ_T0013112.1 MGP_129S1SvImJ_G0011201.1 mouse_genomes_project 15 77661181 77661745 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0042480.1 MGP_129S1SvImJ_G0022307.1 mouse_genomes_project 15 100458120 100473518 + MGP_129S1SvImJ_P0042480 Ccdc65 protein_coding protein_coding MGP_129S1SvImJ_T0042109.1 MGP_129S1SvImJ_G0022197.1 mouse_genomes_project 15 86750875 86785625 + MGP_129S1SvImJ_P0042109 Ttc38 protein_coding protein_coding MGP_129S1SvImJ_T0042110.1 MGP_129S1SvImJ_G0022197.1 mouse_genomes_project 15 86750913 86784548 + Ttc38 protein_coding processed_transcript MGP_129S1SvImJ_T0042111.1 MGP_129S1SvImJ_G0022197.1 mouse_genomes_project 15 86750913 86768460 + MGP_129S1SvImJ_P0042111 Ttc38 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040932.1 MGP_129S1SvImJ_G0021840.1 mouse_genomes_project 15 51002814 51008430 + MGP_129S1SvImJ_P0040932 Aard protein_coding protein_coding MGP_129S1SvImJ_T0042672.1 MGP_129S1SvImJ_G0022365.1 mouse_genomes_project 15 103163767 103187466 + MGP_129S1SvImJ_P0042672 Acvrl1 protein_coding protein_coding MGP_129S1SvImJ_T0042673.1 MGP_129S1SvImJ_G0022365.1 mouse_genomes_project 15 103163782 103172140 + MGP_129S1SvImJ_P0042673 Acvrl1 protein_coding protein_coding MGP_129S1SvImJ_T0042674.1 MGP_129S1SvImJ_G0022365.1 mouse_genomes_project 15 103163796 103185763 + MGP_129S1SvImJ_P0042674 Acvrl1 protein_coding protein_coding MGP_129S1SvImJ_T0042675.1 MGP_129S1SvImJ_G0022365.1 mouse_genomes_project 15 103163796 103172760 + MGP_129S1SvImJ_P0042675 Acvrl1 protein_coding protein_coding MGP_129S1SvImJ_T0042676.1 MGP_129S1SvImJ_G0022365.1 mouse_genomes_project 15 103163819 103185762 + MGP_129S1SvImJ_P0042676 Acvrl1 protein_coding protein_coding MGP_129S1SvImJ_T0042677.1 MGP_129S1SvImJ_G0022365.1 mouse_genomes_project 15 103164167 103185764 + MGP_129S1SvImJ_P0042677 Acvrl1 protein_coding protein_coding MGP_129S1SvImJ_T0042678.1 MGP_129S1SvImJ_G0022365.1 mouse_genomes_project 15 103164169 103185762 + MGP_129S1SvImJ_P0042678 Acvrl1 protein_coding protein_coding MGP_129S1SvImJ_T0042679.1 MGP_129S1SvImJ_G0022365.1 mouse_genomes_project 15 103170861 103172911 + MGP_129S1SvImJ_P0042679 Acvrl1 protein_coding protein_coding MGP_129S1SvImJ_T0042680.1 MGP_129S1SvImJ_G0022365.1 mouse_genomes_project 15 103171578 103187466 + MGP_129S1SvImJ_P0042680 Acvrl1 protein_coding protein_coding MGP_129S1SvImJ_T0042681.1 MGP_129S1SvImJ_G0022365.1 mouse_genomes_project 15 103173096 103174471 + Acvrl1 protein_coding retained_intron MGP_129S1SvImJ_T0042682.1 MGP_129S1SvImJ_G0022365.1 mouse_genomes_project 15 103175038 103182891 + Acvrl1 protein_coding processed_transcript MGP_129S1SvImJ_T0100723.1 MGP_129S1SvImJ_G0038790.1 mouse_genomes_project 15 13196052 13196180 + Gm25550 snoRNA snoRNA MGP_129S1SvImJ_T0042192.1 MGP_129S1SvImJ_G0022221.1 mouse_genomes_project 15 90330146 90356623 - MGP_129S1SvImJ_P0042192 Plxnb2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042193.1 MGP_129S1SvImJ_G0022221.1 mouse_genomes_project 15 90330150 90331181 - Plxnb2 protein_coding processed_transcript MGP_129S1SvImJ_T0042194.1 MGP_129S1SvImJ_G0022221.1 mouse_genomes_project 15 90330582 90331846 - Plxnb2 protein_coding processed_transcript MGP_129S1SvImJ_T0042195.1 MGP_129S1SvImJ_G0022221.1 mouse_genomes_project 15 90336853 90337390 - Plxnb2 protein_coding processed_transcript MGP_129S1SvImJ_T0042196.1 MGP_129S1SvImJ_G0022221.1 mouse_genomes_project 15 90340733 90341640 - Plxnb2 protein_coding processed_transcript MGP_129S1SvImJ_T0040553.1 MGP_129S1SvImJ_G0021710.1 mouse_genomes_project 15 6148765 6191506 + MGP_129S1SvImJ_P0040553 Nadk2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040554.1 MGP_129S1SvImJ_G0021710.1 mouse_genomes_project 15 6150418 6193637 + Nadk2 protein_coding processed_transcript MGP_129S1SvImJ_T0040555.1 MGP_129S1SvImJ_G0021710.1 mouse_genomes_project 15 6150418 6193637 + MGP_129S1SvImJ_P0040555 Nadk2 protein_coding protein_coding MGP_129S1SvImJ_T0040556.1 MGP_129S1SvImJ_G0021710.1 mouse_genomes_project 15 6150418 6193637 + MGP_129S1SvImJ_P0040556 Nadk2 protein_coding protein_coding MGP_129S1SvImJ_T0040557.1 MGP_129S1SvImJ_G0021710.1 mouse_genomes_project 15 6151309 6193010 + Nadk2 protein_coding processed_transcript MGP_129S1SvImJ_T0040558.1 MGP_129S1SvImJ_G0021710.1 mouse_genomes_project 15 6151315 6190323 + Nadk2 protein_coding processed_transcript MGP_129S1SvImJ_T0040559.1 MGP_129S1SvImJ_G0021710.1 mouse_genomes_project 15 6165406 6189988 + Nadk2 protein_coding processed_transcript MGP_129S1SvImJ_T0040560.1 MGP_129S1SvImJ_G0021710.1 mouse_genomes_project 15 6181112 6190329 + MGP_129S1SvImJ_P0040560 Nadk2 protein_coding protein_coding MGP_129S1SvImJ_T0040561.1 MGP_129S1SvImJ_G0021710.1 mouse_genomes_project 15 6183960 6189921 + Nadk2 protein_coding retained_intron MGP_129S1SvImJ_T0041897.1 MGP_129S1SvImJ_G0022123.1 mouse_genomes_project 15 82336518 82343081 - MGP_129S1SvImJ_P0041897 Phf5a protein_coding protein_coding MGP_129S1SvImJ_T0041898.1 MGP_129S1SvImJ_G0022123.1 mouse_genomes_project 15 82336855 82342835 - Phf5a protein_coding processed_transcript MGP_129S1SvImJ_T0099453.1 MGP_129S1SvImJ_G0037520.1 mouse_genomes_project 15 51484993 51485097 + Gm23545 snRNA snRNA MGP_129S1SvImJ_T0040488.1 MGP_129S1SvImJ_G0021695.1 mouse_genomes_project 15 3251790 3404786 + Dab2 protein_coding processed_transcript MGP_129S1SvImJ_T0040489.1 MGP_129S1SvImJ_G0021695.1 mouse_genomes_project 15 3251790 3409978 + MGP_129S1SvImJ_P0040489 Dab2 protein_coding protein_coding MGP_129S1SvImJ_T0040490.1 MGP_129S1SvImJ_G0021695.1 mouse_genomes_project 15 3251815 3386359 + MGP_129S1SvImJ_P0040490 Dab2 protein_coding protein_coding MGP_129S1SvImJ_T0040491.1 MGP_129S1SvImJ_G0021695.1 mouse_genomes_project 15 3251834 3397180 + MGP_129S1SvImJ_P0040491 Dab2 protein_coding protein_coding MGP_129S1SvImJ_T0040492.1 MGP_129S1SvImJ_G0021695.1 mouse_genomes_project 15 3251870 3293264 + Dab2 protein_coding processed_transcript MGP_129S1SvImJ_T0040493.1 MGP_129S1SvImJ_G0021695.1 mouse_genomes_project 15 3347464 3409971 + MGP_129S1SvImJ_P0040493 Dab2 protein_coding protein_coding MGP_129S1SvImJ_T0040494.1 MGP_129S1SvImJ_G0021695.1 mouse_genomes_project 15 3347614 3409971 + MGP_129S1SvImJ_P0040494 Dab2 protein_coding protein_coding MGP_129S1SvImJ_T0040495.1 MGP_129S1SvImJ_G0021695.1 mouse_genomes_project 15 3347642 3408894 + MGP_129S1SvImJ_P0040495 Dab2 protein_coding protein_coding MGP_129S1SvImJ_T0040496.1 MGP_129S1SvImJ_G0021695.1 mouse_genomes_project 15 3347643 3408914 + MGP_129S1SvImJ_P0040496 Dab2 protein_coding protein_coding MGP_129S1SvImJ_T0040497.1 MGP_129S1SvImJ_G0021695.1 mouse_genomes_project 15 3347645 3397180 + MGP_129S1SvImJ_P0040497 Dab2 protein_coding protein_coding MGP_129S1SvImJ_T0040498.1 MGP_129S1SvImJ_G0021695.1 mouse_genomes_project 15 3349914 3387737 + MGP_129S1SvImJ_P0040498 Dab2 protein_coding protein_coding MGP_129S1SvImJ_T0040499.1 MGP_129S1SvImJ_G0021695.1 mouse_genomes_project 15 3357854 3389256 + MGP_129S1SvImJ_P0040499 Dab2 protein_coding protein_coding MGP_129S1SvImJ_T0040500.1 MGP_129S1SvImJ_G0021695.1 mouse_genomes_project 15 3391654 3408173 + MGP_129S1SvImJ_P0040500 Dab2 protein_coding protein_coding MGP_129S1SvImJ_T0040501.1 MGP_129S1SvImJ_G0021695.1 mouse_genomes_project 15 3392576 3394439 + Dab2 protein_coding retained_intron MGP_129S1SvImJ_T0042671.1 MGP_129S1SvImJ_G0022364.1 mouse_genomes_project 15 103149519 103155269 + MGP_129S1SvImJ_P0042671 Ankrd33 protein_coding protein_coding MGP_129S1SvImJ_T0010091.1 MGP_129S1SvImJ_G0008207.1 mouse_genomes_project 15 83221549 83221609 - Gm27742 miRNA miRNA MGP_129S1SvImJ_T0100740.1 MGP_129S1SvImJ_G0038807.1 mouse_genomes_project 15 42954964 42955090 + Gm24903 snoRNA snoRNA MGP_129S1SvImJ_T0040945.1 MGP_129S1SvImJ_G0021847.1 mouse_genomes_project 15 53460863 53511659 + MGP_129S1SvImJ_P0040945 Colec10 protein_coding protein_coding MGP_129S1SvImJ_T0006771.1 MGP_129S1SvImJ_G0005597.1 mouse_genomes_project 15 42032559 42074569 - Gm10373 lincRNA lincRNA MGP_129S1SvImJ_T0100748.1 MGP_129S1SvImJ_G0038815.1 mouse_genomes_project 15 59964212 59964344 - Gm23835 snoRNA snoRNA MGP_129S1SvImJ_T0099484.1 MGP_129S1SvImJ_G0037551.1 mouse_genomes_project 15 101690639 101690746 - Gm25897 snRNA snRNA MGP_129S1SvImJ_T0100743.1 MGP_129S1SvImJ_G0038810.1 mouse_genomes_project 15 46536904 46537041 + Gm23530 snoRNA snoRNA MGP_129S1SvImJ_T0000968.1 MGP_129S1SvImJ_G0000900.1 mouse_genomes_project 15 86544903 86548248 + TEC TEC MGP_129S1SvImJ_T0099472.1 MGP_129S1SvImJ_G0037539.1 mouse_genomes_project 15 81442434 81442585 + Gm25131 snRNA snRNA MGP_129S1SvImJ_T0040531.1 MGP_129S1SvImJ_G0021703.1 mouse_genomes_project 15 4900755 5136501 - MGP_129S1SvImJ_P0040531 Wdr70 protein_coding protein_coding MGP_129S1SvImJ_T0040675.1 MGP_129S1SvImJ_G0021744.1 mouse_genomes_project 15 18371801 18373333 - MGP_129S1SvImJ_P0040675 Acot10 protein_coding protein_coding MGP_129S1SvImJ_T0040961.1 MGP_129S1SvImJ_G0021854.1 mouse_genomes_project 15 54185247 54334443 + MGP_129S1SvImJ_P0040961 Deptor protein_coding protein_coding MGP_129S1SvImJ_T0040962.1 MGP_129S1SvImJ_G0021854.1 mouse_genomes_project 15 54185354 54296008 + MGP_129S1SvImJ_P0040962 Deptor protein_coding protein_coding MGP_129S1SvImJ_T0040963.1 MGP_129S1SvImJ_G0021854.1 mouse_genomes_project 15 54206369 54329383 + MGP_129S1SvImJ_P0040963 Deptor protein_coding protein_coding MGP_129S1SvImJ_T0042824.1 MGP_129S1SvImJ_G0022422.1 mouse_genomes_project 15 104871089 104879486 - MGP_129S1SvImJ_P0042824 protein_coding protein_coding MGP_129S1SvImJ_T0042825.1 MGP_129S1SvImJ_G0022422.1 mouse_genomes_project 15 104871239 104876108 - MGP_129S1SvImJ_P0042825 protein_coding protein_coding MGP_129S1SvImJ_T0042826.1 MGP_129S1SvImJ_G0022422.1 mouse_genomes_project 15 104872964 104876102 - MGP_129S1SvImJ_P0042826 protein_coding protein_coding MGP_129S1SvImJ_T0042827.1 MGP_129S1SvImJ_G0022422.1 mouse_genomes_project 15 104874037 104880711 - MGP_129S1SvImJ_P0042827 protein_coding protein_coding MGP_129S1SvImJ_T0042498.1 MGP_129S1SvImJ_G0022316.1 mouse_genomes_project 15 100662140 100667650 - MGP_129S1SvImJ_P0042498 Dhh protein_coding protein_coding MGP_129S1SvImJ_T0042024.1 MGP_129S1SvImJ_G0022169.1 mouse_genomes_project 15 84317015 84451164 - MGP_129S1SvImJ_P0042024 Scube1 protein_coding protein_coding MGP_129S1SvImJ_T0042025.1 MGP_129S1SvImJ_G0022169.1 mouse_genomes_project 15 84319419 84451164 - Scube1 protein_coding retained_intron MGP_129S1SvImJ_T0042026.1 MGP_129S1SvImJ_G0022169.1 mouse_genomes_project 15 84319423 84451164 - MGP_129S1SvImJ_P0042026 Scube1 protein_coding protein_coding MGP_129S1SvImJ_T0042027.1 MGP_129S1SvImJ_G0022169.1 mouse_genomes_project 15 84320926 84451164 - MGP_129S1SvImJ_P0042027 Scube1 protein_coding protein_coding MGP_129S1SvImJ_T0042028.1 MGP_129S1SvImJ_G0022169.1 mouse_genomes_project 15 84320926 84451164 - MGP_129S1SvImJ_P0042028 Scube1 protein_coding protein_coding MGP_129S1SvImJ_T0041621.1 MGP_129S1SvImJ_G0022053.1 mouse_genomes_project 15 79067507 79075759 + MGP_129S1SvImJ_P0041621 Cdc42ep1 protein_coding protein_coding MGP_129S1SvImJ_T0010053.1 MGP_129S1SvImJ_G0008169.1 mouse_genomes_project 15 34023566 34023644 - Mir875 miRNA miRNA MGP_129S1SvImJ_T0041853.1 MGP_129S1SvImJ_G0022112.1 mouse_genomes_project 15 81828794 81830168 - MGP_129S1SvImJ_P0041853 Dnajb7 protein_coding protein_coding MGP_129S1SvImJ_T0041552.1 MGP_129S1SvImJ_G0022027.1 mouse_genomes_project 15 77729205 77740223 - MGP_129S1SvImJ_P0041552 Apol10b protein_coding protein_coding MGP_129S1SvImJ_T0041164.1 MGP_129S1SvImJ_G0021921.1 mouse_genomes_project 15 73255747 73316281 + MGP_129S1SvImJ_P0041164 Dennd3 protein_coding protein_coding MGP_129S1SvImJ_T0041165.1 MGP_129S1SvImJ_G0021921.1 mouse_genomes_project 15 73255859 73316138 + MGP_129S1SvImJ_P0041165 Dennd3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041166.1 MGP_129S1SvImJ_G0021921.1 mouse_genomes_project 15 73262187 73266862 + Dennd3 protein_coding processed_transcript MGP_129S1SvImJ_T0041167.1 MGP_129S1SvImJ_G0021921.1 mouse_genomes_project 15 73265663 73314993 + MGP_129S1SvImJ_P0041167 Dennd3 protein_coding protein_coding MGP_129S1SvImJ_T0041168.1 MGP_129S1SvImJ_G0021921.1 mouse_genomes_project 15 73302111 73312249 + MGP_129S1SvImJ_P0041168 Dennd3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041169.1 MGP_129S1SvImJ_G0021921.1 mouse_genomes_project 15 73308951 73311153 + Dennd3 protein_coding retained_intron MGP_129S1SvImJ_T0041170.1 MGP_129S1SvImJ_G0021921.1 mouse_genomes_project 15 73311153 73314938 + Dennd3 protein_coding retained_intron MGP_129S1SvImJ_T0041041.1 MGP_129S1SvImJ_G0021886.1 mouse_genomes_project 15 59276355 59278108 - MGP_129S1SvImJ_P0041041 4933412E24Rik protein_coding protein_coding MGP_129S1SvImJ_T0040479.1 MGP_129S1SvImJ_G0021691.1 mouse_genomes_project 15 2017590 2022774 + MGP_129S1SvImJ_P0040479 Rpl37 protein_coding protein_coding MGP_129S1SvImJ_T0040480.1 MGP_129S1SvImJ_G0021691.1 mouse_genomes_project 15 2017659 2019614 + MGP_129S1SvImJ_P0040480 Rpl37 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040973.1 MGP_129S1SvImJ_G0021857.1 mouse_genomes_project 15 54646511 54699838 + MGP_129S1SvImJ_P0040973 Mtbp protein_coding protein_coding MGP_129S1SvImJ_T0040974.1 MGP_129S1SvImJ_G0021857.1 mouse_genomes_project 15 54646536 54722348 + MGP_129S1SvImJ_P0040974 Mtbp protein_coding protein_coding MGP_129S1SvImJ_T0040975.1 MGP_129S1SvImJ_G0021857.1 mouse_genomes_project 15 54646651 54657994 + MGP_129S1SvImJ_P0040975 Mtbp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040976.1 MGP_129S1SvImJ_G0021857.1 mouse_genomes_project 15 54707449 54709801 + Mtbp protein_coding retained_intron MGP_129S1SvImJ_T0040977.1 MGP_129S1SvImJ_G0021857.1 mouse_genomes_project 15 54711314 54722340 + Mtbp protein_coding processed_transcript MGP_129S1SvImJ_T0040797.1 MGP_129S1SvImJ_G0021792.1 mouse_genomes_project 15 34557594 34614238 + MGP_129S1SvImJ_P0040797 Spag1 protein_coding protein_coding MGP_129S1SvImJ_T0040798.1 MGP_129S1SvImJ_G0021792.1 mouse_genomes_project 15 34557756 34613789 + MGP_129S1SvImJ_P0040798 Spag1 protein_coding protein_coding MGP_129S1SvImJ_T0041453.1 MGP_129S1SvImJ_G0021998.1 mouse_genomes_project 15 76618100 76621288 + MGP_129S1SvImJ_P0041453 Slc52a2 protein_coding protein_coding MGP_129S1SvImJ_T0006791.1 MGP_129S1SvImJ_G0005605.1 mouse_genomes_project 15 77229790 77241658 + 1700109K24Rik lincRNA lincRNA MGP_129S1SvImJ_T0040892.1 MGP_129S1SvImJ_G0021824.1 mouse_genomes_project 15 41596127 41751754 - MGP_129S1SvImJ_P0040892 Rspo2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042062.1 MGP_129S1SvImJ_G0022178.1 mouse_genomes_project 15 85169615 85240866 - MGP_129S1SvImJ_P0042062 1810041L15Rik protein_coding protein_coding MGP_129S1SvImJ_T0042063.1 MGP_129S1SvImJ_G0022178.1 mouse_genomes_project 15 85170449 85240479 - MGP_129S1SvImJ_P0042063 1810041L15Rik protein_coding protein_coding MGP_129S1SvImJ_T0042064.1 MGP_129S1SvImJ_G0022178.1 mouse_genomes_project 15 85196840 85240544 - MGP_129S1SvImJ_P0042064 1810041L15Rik protein_coding protein_coding MGP_129S1SvImJ_T0042065.1 MGP_129S1SvImJ_G0022178.1 mouse_genomes_project 15 85207648 85237562 - MGP_129S1SvImJ_P0042065 1810041L15Rik protein_coding protein_coding MGP_129S1SvImJ_T0102254.1 MGP_129S1SvImJ_G0040088.1 mouse_genomes_project 15 74807054 74808922 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0098320.1 MGP_129S1SvImJ_G0036405.1 mouse_genomes_project 15 43494871 43496547 + pseudogene pseudogene MGP_129S1SvImJ_T0011404.1 MGP_129S1SvImJ_G0009520.1 mouse_genomes_project 15 15497984 15498292 + Gm22895 misc_RNA misc_RNA MGP_129S1SvImJ_T0041656.1 MGP_129S1SvImJ_G0022063.1 mouse_genomes_project 15 79331297 79351974 + MGP_129S1SvImJ_P0041656 Eif3l protein_coding protein_coding MGP_129S1SvImJ_T0042712.1 MGP_129S1SvImJ_G0022388.1 mouse_genomes_project 15 103946360 103953668 - MGP_129S1SvImJ_P0042712 Krt2 protein_coding protein_coding MGP_129S1SvImJ_T0010078.1 MGP_129S1SvImJ_G0008194.1 mouse_genomes_project 15 79874274 79874400 - Gm27903 miRNA miRNA MGP_129S1SvImJ_T0041381.1 MGP_129S1SvImJ_G0021983.1 mouse_genomes_project 15 76396620 76399895 + MGP_129S1SvImJ_P0041381 Exosc4 protein_coding protein_coding MGP_129S1SvImJ_T0041382.1 MGP_129S1SvImJ_G0021983.1 mouse_genomes_project 15 76396814 76398313 + Exosc4 protein_coding processed_transcript MGP_129S1SvImJ_T0042716.1 MGP_129S1SvImJ_G0022392.1 mouse_genomes_project 15 104051669 104057896 - MGP_129S1SvImJ_P0042716 Krt4 protein_coding protein_coding MGP_129S1SvImJ_T0042051.1 MGP_129S1SvImJ_G0022175.1 mouse_genomes_project 15 84954245 84977679 + MGP_129S1SvImJ_P0042051 Samm50 protein_coding protein_coding MGP_129S1SvImJ_T0042182.1 MGP_129S1SvImJ_G0022218.1 mouse_genomes_project 15 90295347 90301803 - Hdac10 protein_coding processed_transcript MGP_129S1SvImJ_T0042183.1 MGP_129S1SvImJ_G0022218.1 mouse_genomes_project 15 90295347 90301850 - MGP_129S1SvImJ_P0042183 Hdac10 protein_coding protein_coding MGP_129S1SvImJ_T0042184.1 MGP_129S1SvImJ_G0022218.1 mouse_genomes_project 15 90295349 90301811 - Hdac10 protein_coding retained_intron MGP_129S1SvImJ_T0042185.1 MGP_129S1SvImJ_G0022218.1 mouse_genomes_project 15 90295349 90301801 - Hdac10 protein_coding retained_intron MGP_129S1SvImJ_T0042186.1 MGP_129S1SvImJ_G0022218.1 mouse_genomes_project 15 90295351 90301829 - Hdac10 protein_coding retained_intron MGP_129S1SvImJ_T0042187.1 MGP_129S1SvImJ_G0022218.1 mouse_genomes_project 15 90295612 90301598 - MGP_129S1SvImJ_P0042187 Hdac10 protein_coding protein_coding MGP_129S1SvImJ_T0042188.1 MGP_129S1SvImJ_G0022218.1 mouse_genomes_project 15 90295714 90298835 - Hdac10 protein_coding processed_transcript MGP_129S1SvImJ_T0042189.1 MGP_129S1SvImJ_G0022218.1 mouse_genomes_project 15 90299128 90300640 - Hdac10 protein_coding processed_transcript MGP_129S1SvImJ_T0017490.1 MGP_129S1SvImJ_G0015296.1 mouse_genomes_project 15 63570280 63572850 + Gm20717 processed_transcript processed_transcript MGP_129S1SvImJ_T0042441.1 MGP_129S1SvImJ_G0022294.1 mouse_genomes_project 15 100094856 100095958 - MGP_129S1SvImJ_P0042441 Olfr283 protein_coding protein_coding MGP_129S1SvImJ_T0041103.1 MGP_129S1SvImJ_G0021902.1 mouse_genomes_project 15 65430379 65477696 - MGP_129S1SvImJ_P0041103 Hhla1 protein_coding protein_coding MGP_129S1SvImJ_T0099455.1 MGP_129S1SvImJ_G0037522.1 mouse_genomes_project 15 54339647 54339709 - Gm26296 snRNA snRNA MGP_129S1SvImJ_T0011405.1 MGP_129S1SvImJ_G0009521.1 mouse_genomes_project 15 34399039 34399294 + Gm25372 misc_RNA misc_RNA MGP_129S1SvImJ_T0010044.1 MGP_129S1SvImJ_G0008160.1 mouse_genomes_project 15 2797305 2797419 + Gm27760 miRNA miRNA MGP_129S1SvImJ_T0042048.1 MGP_129S1SvImJ_G0022173.1 mouse_genomes_project 15 84861510 84873598 - MGP_129S1SvImJ_P0042048 Pnpla5 protein_coding protein_coding MGP_129S1SvImJ_T0041322.1 MGP_129S1SvImJ_G0021972.1 mouse_genomes_project 15 76062135 76087199 + MGP_129S1SvImJ_P0041322 protein_coding protein_coding MGP_129S1SvImJ_T0041323.1 MGP_129S1SvImJ_G0021972.1 mouse_genomes_project 15 76066868 76086678 + MGP_129S1SvImJ_P0041323 protein_coding protein_coding MGP_129S1SvImJ_T0041324.1 MGP_129S1SvImJ_G0021972.1 mouse_genomes_project 15 76086211 76089804 + protein_coding processed_transcript MGP_129S1SvImJ_T0041325.1 MGP_129S1SvImJ_G0021972.1 mouse_genomes_project 15 76086910 76098173 + protein_coding processed_transcript MGP_129S1SvImJ_T0041326.1 MGP_129S1SvImJ_G0021972.1 mouse_genomes_project 15 76088605 76089865 + protein_coding retained_intron MGP_129S1SvImJ_T0041360.1 MGP_129S1SvImJ_G0021978.1 mouse_genomes_project 15 76294697 76297247 - MGP_129S1SvImJ_P0041360 Parp10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041361.1 MGP_129S1SvImJ_G0021978.1 mouse_genomes_project 15 76296526 76306975 - Parp10 protein_coding retained_intron MGP_129S1SvImJ_T0041362.1 MGP_129S1SvImJ_G0021978.1 mouse_genomes_project 15 76296526 76306961 - MGP_129S1SvImJ_P0041362 Parp10 protein_coding protein_coding MGP_129S1SvImJ_T0041363.1 MGP_129S1SvImJ_G0021978.1 mouse_genomes_project 15 76296526 76306982 - MGP_129S1SvImJ_P0041363 Parp10 protein_coding protein_coding MGP_129S1SvImJ_T0041364.1 MGP_129S1SvImJ_G0021978.1 mouse_genomes_project 15 76296913 76297777 - Parp10 protein_coding processed_transcript MGP_129S1SvImJ_T0041365.1 MGP_129S1SvImJ_G0021978.1 mouse_genomes_project 15 76297262 76297997 - Parp10 protein_coding retained_intron MGP_129S1SvImJ_T0006776.1 MGP_129S1SvImJ_G0005600.1 mouse_genomes_project 15 45334409 45352888 + 4930548G14Rik lincRNA lincRNA MGP_129S1SvImJ_T0006777.1 MGP_129S1SvImJ_G0005600.1 mouse_genomes_project 15 45336557 45336875 + 4930548G14Rik lincRNA lincRNA MGP_129S1SvImJ_T0003614.1 MGP_129S1SvImJ_G0003276.1 mouse_genomes_project 15 936655 939375 - Gm15632 antisense antisense MGP_129S1SvImJ_T0102264.1 MGP_129S1SvImJ_G0040098.1 mouse_genomes_project 15 83403945 83408125 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0041951.1 MGP_129S1SvImJ_G0022142.1 mouse_genomes_project 15 82843019 82853465 - MGP_129S1SvImJ_P0041951 Naga protein_coding protein_coding MGP_129S1SvImJ_T0013120.1 MGP_129S1SvImJ_G0011209.1 mouse_genomes_project 15 86385629 86386037 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0040859.1 MGP_129S1SvImJ_G0021809.1 mouse_genomes_project 15 37199696 37231730 + MGP_129S1SvImJ_P0040859 Atp6v1c1 protein_coding protein_coding MGP_129S1SvImJ_T0040860.1 MGP_129S1SvImJ_G0021810.1 mouse_genomes_project 15 37344822 37364539 + MGP_129S1SvImJ_P0040860 Baalc protein_coding protein_coding MGP_129S1SvImJ_T0013098.1 MGP_129S1SvImJ_G0011187.1 mouse_genomes_project 15 53359053 53359460 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006752.1 MGP_129S1SvImJ_G0005582.1 mouse_genomes_project 15 7869952 7875686 + 4930556M19Rik lincRNA lincRNA MGP_129S1SvImJ_T0099440.1 MGP_129S1SvImJ_G0037507.1 mouse_genomes_project 15 21565870 21566028 - Gm23980 snRNA snRNA MGP_129S1SvImJ_T0041964.1 MGP_129S1SvImJ_G0022148.1 mouse_genomes_project 15 82930175 82934547 - MGP_129S1SvImJ_P0041964 Cyp2d10 protein_coding protein_coding MGP_129S1SvImJ_T0102258.1 MGP_129S1SvImJ_G0040092.1 mouse_genomes_project 15 75153232 75155354 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0010098.1 MGP_129S1SvImJ_G0008214.1 mouse_genomes_project 15 85762957 85763055 - Mir1249 miRNA miRNA MGP_129S1SvImJ_T0042698.1 MGP_129S1SvImJ_G0022375.1 mouse_genomes_project 15 103544697 103555413 + MGP_129S1SvImJ_P0042698 Krt86 protein_coding protein_coding MGP_129S1SvImJ_T0041110.1 MGP_129S1SvImJ_G0021906.1 mouse_genomes_project 15 66090887 66164112 + MGP_129S1SvImJ_P0041110 Phf20l1 protein_coding protein_coding MGP_129S1SvImJ_T0010054.1 MGP_129S1SvImJ_G0008170.1 mouse_genomes_project 15 34618661 34618780 - Mir8097 miRNA miRNA MGP_129S1SvImJ_T0041905.1 MGP_129S1SvImJ_G0022125.1 mouse_genomes_project 15 82388883 82400849 - MGP_129S1SvImJ_P0041905 Polr3h protein_coding protein_coding MGP_129S1SvImJ_T0040765.1 MGP_129S1SvImJ_G0021780.1 mouse_genomes_project 15 32762269 32784765 + MGP_129S1SvImJ_P0040765 Erich5 protein_coding protein_coding MGP_129S1SvImJ_T0040934.1 MGP_129S1SvImJ_G0021842.1 mouse_genomes_project 15 51702751 51729627 + MGP_129S1SvImJ_P0040934 Med30 protein_coding protein_coding MGP_129S1SvImJ_T0040882.1 MGP_129S1SvImJ_G0021820.1 mouse_genomes_project 15 39124619 39602716 + MGP_129S1SvImJ_P0040882 Zfpm2 protein_coding protein_coding MGP_129S1SvImJ_T0006770.1 MGP_129S1SvImJ_G0005596.1 mouse_genomes_project 15 41264265 41294819 + Gm17473 lincRNA lincRNA MGP_129S1SvImJ_T0040909.1 MGP_129S1SvImJ_G0021835.1 mouse_genomes_project 15 46293264 47626866 - MGP_129S1SvImJ_P0040909 Csmd3 protein_coding protein_coding MGP_129S1SvImJ_T0040910.1 MGP_129S1SvImJ_G0021835.1 mouse_genomes_project 15 46293265 47626922 - MGP_129S1SvImJ_P0040910 Csmd3 protein_coding protein_coding MGP_129S1SvImJ_T0040911.1 MGP_129S1SvImJ_G0021835.1 mouse_genomes_project 15 46293349 47626996 - MGP_129S1SvImJ_P0040911 Csmd3 protein_coding protein_coding MGP_129S1SvImJ_T0040912.1 MGP_129S1SvImJ_G0021835.1 mouse_genomes_project 15 46294349 46766556 - MGP_129S1SvImJ_P0040912 Csmd3 protein_coding protein_coding MGP_129S1SvImJ_T0040913.1 MGP_129S1SvImJ_G0021835.1 mouse_genomes_project 15 46294352 46332624 - Csmd3 protein_coding retained_intron MGP_129S1SvImJ_T0040914.1 MGP_129S1SvImJ_G0021835.1 mouse_genomes_project 15 46347585 46352802 - Csmd3 protein_coding retained_intron MGP_129S1SvImJ_T0040915.1 MGP_129S1SvImJ_G0021835.1 mouse_genomes_project 15 46703955 46719610 - Csmd3 protein_coding retained_intron MGP_129S1SvImJ_T0040916.1 MGP_129S1SvImJ_G0021835.1 mouse_genomes_project 15 47035280 47626922 - Csmd3 protein_coding processed_transcript MGP_129S1SvImJ_T0040917.1 MGP_129S1SvImJ_G0021835.1 mouse_genomes_project 15 47072552 47626922 - Csmd3 protein_coding retained_intron MGP_129S1SvImJ_T0042220.1 MGP_129S1SvImJ_G0022227.1 mouse_genomes_project 15 90542294 90546950 - MGP_129S1SvImJ_P0042220 Lmf2 protein_coding protein_coding MGP_129S1SvImJ_T0040789.1 MGP_129S1SvImJ_G0021789.1 mouse_genomes_project 15 34376572 34520055 - MGP_129S1SvImJ_P0040789 Rgs22 protein_coding protein_coding MGP_129S1SvImJ_T0040790.1 MGP_129S1SvImJ_G0021789.1 mouse_genomes_project 15 34376663 34412652 - MGP_129S1SvImJ_P0040790 Rgs22 protein_coding protein_coding MGP_129S1SvImJ_T0040791.1 MGP_129S1SvImJ_G0021789.1 mouse_genomes_project 15 34377422 34490910 - MGP_129S1SvImJ_P0040791 Rgs22 protein_coding protein_coding MGP_129S1SvImJ_T0040792.1 MGP_129S1SvImJ_G0021789.1 mouse_genomes_project 15 34420925 34462667 - MGP_129S1SvImJ_P0040792 Rgs22 protein_coding protein_coding MGP_129S1SvImJ_T0040793.1 MGP_129S1SvImJ_G0021789.1 mouse_genomes_project 15 34518783 34520040 - Rgs22 protein_coding retained_intron MGP_129S1SvImJ_T0003661.1 MGP_129S1SvImJ_G0003313.1 mouse_genomes_project 15 101873036 101874160 - 2310068J16Rik antisense antisense MGP_129S1SvImJ_T0042750.1 MGP_129S1SvImJ_G0022407.1 mouse_genomes_project 15 104464474 104495744 + MGP_129S1SvImJ_P0042750 Espl1 protein_coding protein_coding MGP_129S1SvImJ_T0042020.1 MGP_129S1SvImJ_G0022167.1 mouse_genomes_project 15 84273465 84288799 + MGP_129S1SvImJ_P0042020 Tspo protein_coding protein_coding MGP_129S1SvImJ_T0041316.1 MGP_129S1SvImJ_G0021970.1 mouse_genomes_project 15 76046025 76048081 + Mapk15 protein_coding processed_transcript MGP_129S1SvImJ_T0041317.1 MGP_129S1SvImJ_G0021970.1 mouse_genomes_project 15 76046025 76051409 + MGP_129S1SvImJ_P0041317 Mapk15 protein_coding protein_coding MGP_129S1SvImJ_T0041318.1 MGP_129S1SvImJ_G0021970.1 mouse_genomes_project 15 76048195 76051409 + Mapk15 protein_coding retained_intron MGP_129S1SvImJ_T0041319.1 MGP_129S1SvImJ_G0021970.1 mouse_genomes_project 15 76048969 76051409 + Mapk15 protein_coding processed_transcript MGP_129S1SvImJ_T0013068.1 MGP_129S1SvImJ_G0011157.1 mouse_genomes_project 15 608129 609113 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013113.1 MGP_129S1SvImJ_G0011202.1 mouse_genomes_project 15 78753842 78754280 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102003.1 MGP_129S1SvImJ_G0039863.1 mouse_genomes_project 15 63261968 63380166 + unitary_pseudogene retained_intron MGP_129S1SvImJ_T0102004.1 MGP_129S1SvImJ_G0039863.1 mouse_genomes_project 15 63295102 63297874 + unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0102005.1 MGP_129S1SvImJ_G0039863.1 mouse_genomes_project 15 63372254 63382424 + unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0102006.1 MGP_129S1SvImJ_G0039863.1 mouse_genomes_project 15 63373870 63382635 + unitary_pseudogene unitary_pseudogene MGP_129S1SvImJ_T0040710.1 MGP_129S1SvImJ_G0021757.1 mouse_genomes_project 15 25725539 25751993 - MGP_129S1SvImJ_P0040710 Fam105a protein_coding protein_coding MGP_129S1SvImJ_T0040711.1 MGP_129S1SvImJ_G0021757.1 mouse_genomes_project 15 25727366 25751902 - MGP_129S1SvImJ_P0040711 Fam105a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0017505.1 MGP_129S1SvImJ_G0015307.1 mouse_genomes_project 15 90237010 90240103 - 1810021B22Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017506.1 MGP_129S1SvImJ_G0015307.1 mouse_genomes_project 15 90237010 90240954 - 1810021B22Rik processed_transcript antisense MGP_129S1SvImJ_T0017507.1 MGP_129S1SvImJ_G0015307.1 mouse_genomes_project 15 90237012 90241657 - 1810021B22Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017508.1 MGP_129S1SvImJ_G0015307.1 mouse_genomes_project 15 90237012 90240954 - 1810021B22Rik processed_transcript antisense MGP_129S1SvImJ_T0017509.1 MGP_129S1SvImJ_G0015307.1 mouse_genomes_project 15 90237012 90241016 - 1810021B22Rik processed_transcript antisense MGP_129S1SvImJ_T0042280.1 MGP_129S1SvImJ_G0022242.1 mouse_genomes_project 15 90997203 91066025 - MGP_129S1SvImJ_P0042280 Syt10 protein_coding protein_coding MGP_129S1SvImJ_T0042163.1 MGP_129S1SvImJ_G0022215.1 mouse_genomes_project 15 90240928 90251126 + MGP_129S1SvImJ_P0042163 Trabd protein_coding protein_coding MGP_129S1SvImJ_T0042164.1 MGP_129S1SvImJ_G0022215.1 mouse_genomes_project 15 90241817 90252894 + MGP_129S1SvImJ_P0042164 Trabd protein_coding protein_coding MGP_129S1SvImJ_T0042165.1 MGP_129S1SvImJ_G0022215.1 mouse_genomes_project 15 90241876 90252888 + MGP_129S1SvImJ_P0042165 Trabd protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042166.1 MGP_129S1SvImJ_G0022215.1 mouse_genomes_project 15 90241898 90251947 + MGP_129S1SvImJ_P0042166 Trabd protein_coding protein_coding MGP_129S1SvImJ_T0042167.1 MGP_129S1SvImJ_G0022215.1 mouse_genomes_project 15 90241928 90251950 + MGP_129S1SvImJ_P0042167 Trabd protein_coding protein_coding MGP_129S1SvImJ_T0042168.1 MGP_129S1SvImJ_G0022215.1 mouse_genomes_project 15 90248345 90252888 + Trabd protein_coding retained_intron MGP_129S1SvImJ_T0042169.1 MGP_129S1SvImJ_G0022215.1 mouse_genomes_project 15 90250525 90251441 + Trabd protein_coding retained_intron MGP_129S1SvImJ_T0100745.1 MGP_129S1SvImJ_G0038812.1 mouse_genomes_project 15 52637692 52637824 - Gm23200 snoRNA snoRNA MGP_129S1SvImJ_T0013124.1 MGP_129S1SvImJ_G0011213.1 mouse_genomes_project 15 92865496 92866652 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0041605.1 MGP_129S1SvImJ_G0022045.1 mouse_genomes_project 15 78677395 78691923 - MGP_129S1SvImJ_P0041605 Il2rb protein_coding protein_coding MGP_129S1SvImJ_T0041606.1 MGP_129S1SvImJ_G0022045.1 mouse_genomes_project 15 78678167 78690615 - MGP_129S1SvImJ_P0041606 Il2rb protein_coding protein_coding MGP_129S1SvImJ_T0042363.1 MGP_129S1SvImJ_G0022269.1 mouse_genomes_project 15 97996724 98047992 - MGP_129S1SvImJ_P0042363 Scaf11 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042364.1 MGP_129S1SvImJ_G0022269.1 mouse_genomes_project 15 97996726 98048051 - MGP_129S1SvImJ_P0042364 Scaf11 protein_coding protein_coding MGP_129S1SvImJ_T0006809.1 MGP_129S1SvImJ_G0005619.1 mouse_genomes_project 15 97605592 97632644 - D030018L15Rik lincRNA lincRNA MGP_129S1SvImJ_T0006810.1 MGP_129S1SvImJ_G0005619.1 mouse_genomes_project 15 97605592 97633937 - D030018L15Rik lincRNA lincRNA MGP_129S1SvImJ_T0006811.1 MGP_129S1SvImJ_G0005619.1 mouse_genomes_project 15 97627847 97634063 - D030018L15Rik lincRNA lincRNA MGP_129S1SvImJ_T0006819.1 MGP_129S1SvImJ_G0005624.1 mouse_genomes_project 15 102417283 102431701 - 5330439K02Rik lincRNA lincRNA MGP_129S1SvImJ_T0013128.1 MGP_129S1SvImJ_G0011217.1 mouse_genomes_project 15 101411256 101411613 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100759.1 MGP_129S1SvImJ_G0038826.1 mouse_genomes_project 15 96154235 96154367 - Gm25546 snoRNA snoRNA MGP_129S1SvImJ_T0041963.1 MGP_129S1SvImJ_G0022147.1 mouse_genomes_project 15 82899764 82904437 - MGP_129S1SvImJ_P0041963 Cyp2d11 protein_coding protein_coding MGP_129S1SvImJ_T0000966.1 MGP_129S1SvImJ_G0000898.1 mouse_genomes_project 15 67903811 67906732 - TEC TEC MGP_129S1SvImJ_T0042546.1 MGP_129S1SvImJ_G0022331.1 mouse_genomes_project 15 101265322 101303905 - MGP_129S1SvImJ_P0042546 Nckap5l protein_coding protein_coding MGP_129S1SvImJ_T0042547.1 MGP_129S1SvImJ_G0022331.1 mouse_genomes_project 15 101266902 101267825 - MGP_129S1SvImJ_P0042547 Nckap5l protein_coding protein_coding MGP_129S1SvImJ_T0042548.1 MGP_129S1SvImJ_G0022331.1 mouse_genomes_project 15 101267302 101267821 - Nckap5l protein_coding processed_transcript MGP_129S1SvImJ_T0042549.1 MGP_129S1SvImJ_G0022331.1 mouse_genomes_project 15 101272666 101303869 - MGP_129S1SvImJ_P0042549 Nckap5l protein_coding protein_coding MGP_129S1SvImJ_T0100739.1 MGP_129S1SvImJ_G0038806.1 mouse_genomes_project 15 40492558 40492660 + Gm24751 snoRNA snoRNA MGP_129S1SvImJ_T0013118.1 MGP_129S1SvImJ_G0011207.1 mouse_genomes_project 15 84779395 84779732 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010052.1 MGP_129S1SvImJ_G0008168.1 mouse_genomes_project 15 34023427 34023515 - Mir599 miRNA miRNA MGP_129S1SvImJ_T0040715.1 MGP_129S1SvImJ_G0021761.1 mouse_genomes_project 15 28375211 29251789 + MGP_129S1SvImJ_P0040715 Ctnnd2 protein_coding protein_coding MGP_129S1SvImJ_T0040648.1 MGP_129S1SvImJ_G0021738.1 mouse_genomes_project 15 9597833 9835928 - MGP_129S1SvImJ_P0040648 Pdzd2 protein_coding protein_coding MGP_129S1SvImJ_T0040649.1 MGP_129S1SvImJ_G0021738.1 mouse_genomes_project 15 9638631 9641390 - Pdzd2 protein_coding retained_intron MGP_129S1SvImJ_T0040650.1 MGP_129S1SvImJ_G0021738.1 mouse_genomes_project 15 9645044 9652521 - Pdzd2 protein_coding retained_intron MGP_129S1SvImJ_T0040651.1 MGP_129S1SvImJ_G0021738.1 mouse_genomes_project 15 9647395 9789444 - MGP_129S1SvImJ_P0040651 Pdzd2 protein_coding protein_coding MGP_129S1SvImJ_T0040652.1 MGP_129S1SvImJ_G0021738.1 mouse_genomes_project 15 9700259 9735727 - MGP_129S1SvImJ_P0040652 Pdzd2 protein_coding protein_coding MGP_129S1SvImJ_T0040653.1 MGP_129S1SvImJ_G0021738.1 mouse_genomes_project 15 9700299 9790041 - MGP_129S1SvImJ_P0040653 Pdzd2 protein_coding protein_coding MGP_129S1SvImJ_T0040654.1 MGP_129S1SvImJ_G0021738.1 mouse_genomes_project 15 9767043 9789949 - Pdzd2 protein_coding processed_transcript MGP_129S1SvImJ_T0040655.1 MGP_129S1SvImJ_G0021738.1 mouse_genomes_project 15 9785127 9789447 - Pdzd2 protein_coding retained_intron MGP_129S1SvImJ_T0040656.1 MGP_129S1SvImJ_G0021738.1 mouse_genomes_project 15 9789228 9790396 - Pdzd2 protein_coding retained_intron MGP_129S1SvImJ_T0040657.1 MGP_129S1SvImJ_G0021738.1 mouse_genomes_project 15 9831886 9843652 - Pdzd2 protein_coding processed_transcript MGP_129S1SvImJ_T0041098.1 MGP_129S1SvImJ_G0021901.1 mouse_genomes_project 15 65373148 65417539 - MGP_129S1SvImJ_P0041098 Oc90 protein_coding protein_coding MGP_129S1SvImJ_T0041099.1 MGP_129S1SvImJ_G0021901.1 mouse_genomes_project 15 65373148 65417682 - MGP_129S1SvImJ_P0041099 Oc90 protein_coding protein_coding MGP_129S1SvImJ_T0041100.1 MGP_129S1SvImJ_G0021901.1 mouse_genomes_project 15 65373148 65402070 - MGP_129S1SvImJ_P0041100 Oc90 protein_coding protein_coding MGP_129S1SvImJ_T0041101.1 MGP_129S1SvImJ_G0021901.1 mouse_genomes_project 15 65373487 65388347 - MGP_129S1SvImJ_P0041101 Oc90 protein_coding protein_coding MGP_129S1SvImJ_T0041102.1 MGP_129S1SvImJ_G0021901.1 mouse_genomes_project 15 65373615 65385547 - MGP_129S1SvImJ_P0041102 Oc90 protein_coding protein_coding MGP_129S1SvImJ_T0042316.1 MGP_129S1SvImJ_G0022252.1 mouse_genomes_project 15 93765853 94150655 + MGP_129S1SvImJ_P0042316 Pdzrn4 protein_coding protein_coding MGP_129S1SvImJ_T0042317.1 MGP_129S1SvImJ_G0022252.1 mouse_genomes_project 15 93980286 94150655 + MGP_129S1SvImJ_P0042317 Pdzrn4 protein_coding protein_coding MGP_129S1SvImJ_T0040669.1 MGP_129S1SvImJ_G0021743.1 mouse_genomes_project 15 16419437 16637701 + MGP_129S1SvImJ_P0040669 Cdh10 protein_coding protein_coding MGP_129S1SvImJ_T0040670.1 MGP_129S1SvImJ_G0021743.1 mouse_genomes_project 15 16419448 16507427 + Cdh10 protein_coding retained_intron MGP_129S1SvImJ_T0040671.1 MGP_129S1SvImJ_G0021743.1 mouse_genomes_project 15 16419467 16581922 + Cdh10 protein_coding retained_intron MGP_129S1SvImJ_T0040672.1 MGP_129S1SvImJ_G0021743.1 mouse_genomes_project 15 16420821 16637701 + MGP_129S1SvImJ_P0040672 Cdh10 protein_coding protein_coding MGP_129S1SvImJ_T0040673.1 MGP_129S1SvImJ_G0021743.1 mouse_genomes_project 15 16503023 16637148 + MGP_129S1SvImJ_P0040673 Cdh10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040674.1 MGP_129S1SvImJ_G0021743.1 mouse_genomes_project 15 16628721 16637701 + Cdh10 protein_coding retained_intron MGP_129S1SvImJ_T0042394.1 MGP_129S1SvImJ_G0022280.1 mouse_genomes_project 15 99465443 99507606 - MGP_129S1SvImJ_P0042394 Hdac7 protein_coding protein_coding MGP_129S1SvImJ_T0042395.1 MGP_129S1SvImJ_G0022280.1 mouse_genomes_project 15 99465460 99507879 - MGP_129S1SvImJ_P0042395 Hdac7 protein_coding protein_coding MGP_129S1SvImJ_T0042396.1 MGP_129S1SvImJ_G0022280.1 mouse_genomes_project 15 99465466 99467226 - Hdac7 protein_coding retained_intron MGP_129S1SvImJ_T0042397.1 MGP_129S1SvImJ_G0022280.1 mouse_genomes_project 15 99465489 99507606 - MGP_129S1SvImJ_P0042397 Hdac7 protein_coding protein_coding MGP_129S1SvImJ_T0042398.1 MGP_129S1SvImJ_G0022280.1 mouse_genomes_project 15 99466477 99507489 - MGP_129S1SvImJ_P0042398 Hdac7 protein_coding protein_coding MGP_129S1SvImJ_T0042399.1 MGP_129S1SvImJ_G0022280.1 mouse_genomes_project 15 99470581 99507581 - MGP_129S1SvImJ_P0042399 Hdac7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042400.1 MGP_129S1SvImJ_G0022280.1 mouse_genomes_project 15 99472373 99483868 - MGP_129S1SvImJ_P0042400 Hdac7 protein_coding protein_coding MGP_129S1SvImJ_T0042401.1 MGP_129S1SvImJ_G0022280.1 mouse_genomes_project 15 99474044 99484219 - MGP_129S1SvImJ_P0042401 Hdac7 protein_coding protein_coding MGP_129S1SvImJ_T0010065.1 MGP_129S1SvImJ_G0008181.1 mouse_genomes_project 15 67906723 67906805 - Mir30d miRNA miRNA MGP_129S1SvImJ_T0041607.1 MGP_129S1SvImJ_G0022046.1 mouse_genomes_project 15 78720940 78727219 - C1qtnf6 protein_coding processed_transcript MGP_129S1SvImJ_T0041608.1 MGP_129S1SvImJ_G0022046.1 mouse_genomes_project 15 78720940 78727219 - MGP_129S1SvImJ_P0041608 C1qtnf6 protein_coding protein_coding MGP_129S1SvImJ_T0041609.1 MGP_129S1SvImJ_G0022046.1 mouse_genomes_project 15 78722717 78724922 - C1qtnf6 protein_coding processed_transcript MGP_129S1SvImJ_T0017475.1 MGP_129S1SvImJ_G0015292.1 mouse_genomes_project 15 35870117 35882565 - Gm15941 processed_transcript processed_transcript MGP_129S1SvImJ_T0017476.1 MGP_129S1SvImJ_G0015292.1 mouse_genomes_project 15 35871096 35878770 - Gm15941 processed_transcript processed_transcript MGP_129S1SvImJ_T0017477.1 MGP_129S1SvImJ_G0015292.1 mouse_genomes_project 15 35871287 35882049 - Gm15941 processed_transcript processed_transcript MGP_129S1SvImJ_T0017478.1 MGP_129S1SvImJ_G0015292.1 mouse_genomes_project 15 35871403 35882563 - Gm15941 processed_transcript processed_transcript MGP_129S1SvImJ_T0017479.1 MGP_129S1SvImJ_G0015292.1 mouse_genomes_project 15 35871556 35882554 - Gm15941 processed_transcript processed_transcript MGP_129S1SvImJ_T0017480.1 MGP_129S1SvImJ_G0015292.1 mouse_genomes_project 15 35877297 35883315 - Gm15941 processed_transcript processed_transcript MGP_129S1SvImJ_T0041216.1 MGP_129S1SvImJ_G0021935.1 mouse_genomes_project 15 74524713 74529266 - MGP_129S1SvImJ_P0041216 Slurp2 protein_coding protein_coding MGP_129S1SvImJ_T0042617.1 MGP_129S1SvImJ_G0022353.1 mouse_genomes_project 15 102442637 102458324 - MGP_129S1SvImJ_P0042617 Csrnp2 protein_coding protein_coding MGP_129S1SvImJ_T0006750.1 MGP_129S1SvImJ_G0005580.1 mouse_genomes_project 15 860867 883311 + Gm2093 lincRNA lincRNA MGP_129S1SvImJ_T0010107.1 MGP_129S1SvImJ_G0008223.1 mouse_genomes_project 15 100250855 100250972 - Mir1291 miRNA miRNA MGP_129S1SvImJ_T0041529.1 MGP_129S1SvImJ_G0022019.1 mouse_genomes_project 15 77153134 77160433 - MGP_129S1SvImJ_P0041529 Mb protein_coding protein_coding MGP_129S1SvImJ_T0041530.1 MGP_129S1SvImJ_G0022019.1 mouse_genomes_project 15 77153134 77193000 - MGP_129S1SvImJ_P0041530 Mb protein_coding protein_coding MGP_129S1SvImJ_T0041531.1 MGP_129S1SvImJ_G0022019.1 mouse_genomes_project 15 77153134 77160373 - MGP_129S1SvImJ_P0041531 Mb protein_coding protein_coding MGP_129S1SvImJ_T0042604.1 MGP_129S1SvImJ_G0022349.1 mouse_genomes_project 15 102225418 102237610 + MGP_129S1SvImJ_P0042604 Tmprss12 protein_coding protein_coding MGP_129S1SvImJ_T0040533.1 MGP_129S1SvImJ_G0021705.1 mouse_genomes_project 15 5211834 5285294 + MGP_129S1SvImJ_P0040533 2410089E03Rik protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040534.1 MGP_129S1SvImJ_G0021705.1 mouse_genomes_project 15 5211885 5330124 + MGP_129S1SvImJ_P0040534 2410089E03Rik protein_coding protein_coding MGP_129S1SvImJ_T0040535.1 MGP_129S1SvImJ_G0021705.1 mouse_genomes_project 15 5232183 5233038 + 2410089E03Rik protein_coding retained_intron MGP_129S1SvImJ_T0040536.1 MGP_129S1SvImJ_G0021705.1 mouse_genomes_project 15 5241462 5249458 + 2410089E03Rik protein_coding retained_intron MGP_129S1SvImJ_T0040537.1 MGP_129S1SvImJ_G0021705.1 mouse_genomes_project 15 5263700 5266363 + 2410089E03Rik protein_coding retained_intron MGP_129S1SvImJ_T0040538.1 MGP_129S1SvImJ_G0021705.1 mouse_genomes_project 15 5291703 5330132 + MGP_129S1SvImJ_P0040538 2410089E03Rik protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040539.1 MGP_129S1SvImJ_G0021705.1 mouse_genomes_project 15 5302860 5312466 + 2410089E03Rik protein_coding retained_intron MGP_129S1SvImJ_T0099474.1 MGP_129S1SvImJ_G0037541.1 mouse_genomes_project 15 83815865 83816016 + Rnu12 snRNA snRNA MGP_129S1SvImJ_T0042148.1 MGP_129S1SvImJ_G0022211.1 mouse_genomes_project 15 90051673 90119868 - MGP_129S1SvImJ_P0042148 Ttll8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042149.1 MGP_129S1SvImJ_G0022211.1 mouse_genomes_project 15 90073851 90120053 - MGP_129S1SvImJ_P0042149 Ttll8 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042150.1 MGP_129S1SvImJ_G0022211.1 mouse_genomes_project 15 90076932 90119860 - MGP_129S1SvImJ_P0042150 Ttll8 protein_coding protein_coding MGP_129S1SvImJ_T0042151.1 MGP_129S1SvImJ_G0022211.1 mouse_genomes_project 15 90076988 90119509 - MGP_129S1SvImJ_P0042151 Ttll8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042152.1 MGP_129S1SvImJ_G0022211.1 mouse_genomes_project 15 90078703 90082903 - Ttll8 protein_coding retained_intron MGP_129S1SvImJ_T0042312.1 MGP_129S1SvImJ_G0022251.1 mouse_genomes_project 15 93396212 93602952 + Cntn1 protein_coding retained_intron MGP_129S1SvImJ_T0042313.1 MGP_129S1SvImJ_G0022251.1 mouse_genomes_project 15 93396212 93704859 + MGP_129S1SvImJ_P0042313 Cntn1 protein_coding protein_coding MGP_129S1SvImJ_T0042314.1 MGP_129S1SvImJ_G0022251.1 mouse_genomes_project 15 93473170 93704846 + MGP_129S1SvImJ_P0042314 Cntn1 protein_coding protein_coding MGP_129S1SvImJ_T0042315.1 MGP_129S1SvImJ_G0022251.1 mouse_genomes_project 15 93507874 93703009 + MGP_129S1SvImJ_P0042315 Cntn1 protein_coding protein_coding MGP_129S1SvImJ_T0011407.1 MGP_129S1SvImJ_G0009523.1 mouse_genomes_project 15 57757237 57757538 + Gm23789 misc_RNA misc_RNA MGP_129S1SvImJ_T0040996.1 MGP_129S1SvImJ_G0021864.1 mouse_genomes_project 15 57137797 57164972 + MGP_129S1SvImJ_P0040996 Fam83a protein_coding protein_coding MGP_129S1SvImJ_T0040997.1 MGP_129S1SvImJ_G0021864.1 mouse_genomes_project 15 57138288 57149616 + MGP_129S1SvImJ_P0040997 Fam83a protein_coding protein_coding MGP_129S1SvImJ_T0040998.1 MGP_129S1SvImJ_G0021864.1 mouse_genomes_project 15 57156121 57164010 + Fam83a protein_coding processed_transcript MGP_129S1SvImJ_T0040939.1 MGP_129S1SvImJ_G0021844.1 mouse_genomes_project 15 52475065 52938498 - Samd12 protein_coding processed_transcript MGP_129S1SvImJ_T0040940.1 MGP_129S1SvImJ_G0021844.1 mouse_genomes_project 15 52475245 52938491 - MGP_129S1SvImJ_P0040940 Samd12 protein_coding protein_coding MGP_129S1SvImJ_T0040941.1 MGP_129S1SvImJ_G0021844.1 mouse_genomes_project 15 52475638 52938342 - MGP_129S1SvImJ_P0040941 Samd12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040942.1 MGP_129S1SvImJ_G0021844.1 mouse_genomes_project 15 52856621 52938498 - Samd12 protein_coding processed_transcript MGP_129S1SvImJ_T0042573.1 MGP_129S1SvImJ_G0022341.1 mouse_genomes_project 15 101594339 101601829 + MGP_129S1SvImJ_P0042573 Gpd1 protein_coding protein_coding MGP_129S1SvImJ_T0042574.1 MGP_129S1SvImJ_G0022341.1 mouse_genomes_project 15 101594403 101600616 + MGP_129S1SvImJ_P0042574 Gpd1 protein_coding protein_coding MGP_129S1SvImJ_T0042575.1 MGP_129S1SvImJ_G0022341.1 mouse_genomes_project 15 101596783 101598906 + Gpd1 protein_coding retained_intron MGP_129S1SvImJ_T0042835.1 MGP_129S1SvImJ_G0022427.1 mouse_genomes_project 15 105202349 105207423 + MGP_129S1SvImJ_P0042835 Hoxc10 protein_coding protein_coding MGP_129S1SvImJ_T0041207.1 MGP_129S1SvImJ_G0021929.1 mouse_genomes_project 15 74450196 74453674 - MGP_129S1SvImJ_P0041207 Arc protein_coding protein_coding MGP_129S1SvImJ_T0041208.1 MGP_129S1SvImJ_G0021929.1 mouse_genomes_project 15 74450196 74453676 - MGP_129S1SvImJ_P0041208 Arc protein_coding protein_coding MGP_129S1SvImJ_T0010081.1 MGP_129S1SvImJ_G0008197.1 mouse_genomes_project 15 81014231 81014295 + Mir6957 miRNA miRNA MGP_129S1SvImJ_T0041485.1 MGP_129S1SvImJ_G0022006.1 mouse_genomes_project 15 76766436 76797006 + MGP_129S1SvImJ_P0041485 Ppp1r16a protein_coding protein_coding MGP_129S1SvImJ_T0041486.1 MGP_129S1SvImJ_G0022006.1 mouse_genomes_project 15 76766468 76792877 + Ppp1r16a protein_coding processed_transcript MGP_129S1SvImJ_T0041487.1 MGP_129S1SvImJ_G0022006.1 mouse_genomes_project 15 76791248 76792424 + Ppp1r16a protein_coding processed_transcript MGP_129S1SvImJ_T0041488.1 MGP_129S1SvImJ_G0022006.1 mouse_genomes_project 15 76792474 76797006 + Ppp1r16a protein_coding retained_intron MGP_129S1SvImJ_T0041489.1 MGP_129S1SvImJ_G0022006.1 mouse_genomes_project 15 76792596 76797002 + MGP_129S1SvImJ_P0041489 Ppp1r16a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041490.1 MGP_129S1SvImJ_G0022006.1 mouse_genomes_project 15 76793500 76795436 + Ppp1r16a protein_coding retained_intron MGP_129S1SvImJ_T0041491.1 MGP_129S1SvImJ_G0022006.1 mouse_genomes_project 15 76793515 76795600 + MGP_129S1SvImJ_P0041491 Ppp1r16a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041492.1 MGP_129S1SvImJ_G0022006.1 mouse_genomes_project 15 76793758 76794580 + Ppp1r16a protein_coding retained_intron MGP_129S1SvImJ_T0041493.1 MGP_129S1SvImJ_G0022006.1 mouse_genomes_project 15 76794894 76797006 + Ppp1r16a protein_coding retained_intron MGP_129S1SvImJ_T0041494.1 MGP_129S1SvImJ_G0022006.1 mouse_genomes_project 15 76795003 76797006 + Ppp1r16a protein_coding retained_intron MGP_129S1SvImJ_T0041730.1 MGP_129S1SvImJ_G0022081.1 mouse_genomes_project 15 79970521 79973525 + MGP_129S1SvImJ_P0041730 Tomm22 protein_coding protein_coding MGP_129S1SvImJ_T0041731.1 MGP_129S1SvImJ_G0022081.1 mouse_genomes_project 15 79970751 79973332 + Tomm22 protein_coding processed_transcript MGP_129S1SvImJ_T0010048.1 MGP_129S1SvImJ_G0008164.1 mouse_genomes_project 15 19732659 19732828 - Gm44373 miRNA miRNA MGP_129S1SvImJ_T0042469.1 MGP_129S1SvImJ_G0022304.1 mouse_genomes_project 15 100379740 100392414 + MGP_129S1SvImJ_P0042469 Cacnb3 protein_coding protein_coding MGP_129S1SvImJ_T0042470.1 MGP_129S1SvImJ_G0022304.1 mouse_genomes_project 15 100382284 100392414 + MGP_129S1SvImJ_P0042470 Cacnb3 protein_coding protein_coding MGP_129S1SvImJ_T0041786.1 MGP_129S1SvImJ_G0022093.1 mouse_genomes_project 15 80400274 80425773 + MGP_129S1SvImJ_P0041786 Syngr1 protein_coding protein_coding MGP_129S1SvImJ_T0041787.1 MGP_129S1SvImJ_G0022093.1 mouse_genomes_project 15 80400284 80431833 + MGP_129S1SvImJ_P0041787 Syngr1 protein_coding protein_coding MGP_129S1SvImJ_T0041788.1 MGP_129S1SvImJ_G0022093.1 mouse_genomes_project 15 80408581 80423994 + MGP_129S1SvImJ_P0041788 Syngr1 protein_coding protein_coding MGP_129S1SvImJ_T0041789.1 MGP_129S1SvImJ_G0022093.1 mouse_genomes_project 15 80427804 80428597 + MGP_129S1SvImJ_P0041789 Syngr1 protein_coding protein_coding MGP_129S1SvImJ_T0042340.1 MGP_129S1SvImJ_G0022259.1 mouse_genomes_project 15 95991799 96013775 - MGP_129S1SvImJ_P0042340 Pus7l protein_coding protein_coding MGP_129S1SvImJ_T0042341.1 MGP_129S1SvImJ_G0022259.1 mouse_genomes_project 15 96006410 96013721 - Pus7l protein_coding retained_intron MGP_129S1SvImJ_T0042342.1 MGP_129S1SvImJ_G0022259.1 mouse_genomes_project 15 96010974 96013714 - MGP_129S1SvImJ_P0042342 Pus7l protein_coding protein_coding MGP_129S1SvImJ_T0042477.1 MGP_129S1SvImJ_G0022306.1 mouse_genomes_project 15 100411157 100427726 - MGP_129S1SvImJ_P0042477 Rnd1 protein_coding protein_coding MGP_129S1SvImJ_T0042478.1 MGP_129S1SvImJ_G0022306.1 mouse_genomes_project 15 100416859 100427727 - MGP_129S1SvImJ_P0042478 Rnd1 protein_coding protein_coding MGP_129S1SvImJ_T0042479.1 MGP_129S1SvImJ_G0022306.1 mouse_genomes_project 15 100421073 100427724 - MGP_129S1SvImJ_P0042479 Rnd1 protein_coding protein_coding MGP_129S1SvImJ_T0040640.1 MGP_129S1SvImJ_G0021735.1 mouse_genomes_project 15 9429988 9500752 + MGP_129S1SvImJ_P0040640 Mtmr12 protein_coding protein_coding MGP_129S1SvImJ_T0040641.1 MGP_129S1SvImJ_G0021735.1 mouse_genomes_project 15 9430045 9500506 + MGP_129S1SvImJ_P0040641 Mtmr12 protein_coding protein_coding MGP_129S1SvImJ_T0040642.1 MGP_129S1SvImJ_G0021735.1 mouse_genomes_project 15 9430064 9500631 + MGP_129S1SvImJ_P0040642 Mtmr12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040643.1 MGP_129S1SvImJ_G0021735.1 mouse_genomes_project 15 9430078 9500749 + MGP_129S1SvImJ_P0040643 Mtmr12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040644.1 MGP_129S1SvImJ_G0021735.1 mouse_genomes_project 15 9430159 9498581 + MGP_129S1SvImJ_P0040644 Mtmr12 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040645.1 MGP_129S1SvImJ_G0021735.1 mouse_genomes_project 15 9448452 9471564 + Mtmr12 protein_coding processed_transcript MGP_129S1SvImJ_T0006793.1 MGP_129S1SvImJ_G0005607.1 mouse_genomes_project 15 79091033 79094855 - Gm26634 lincRNA lincRNA MGP_129S1SvImJ_T0041254.1 MGP_129S1SvImJ_G0021950.1 mouse_genomes_project 15 75047583 75049973 + protein_coding retained_intron MGP_129S1SvImJ_T0042129.1 MGP_129S1SvImJ_G0022202.1 mouse_genomes_project 15 87092351 87115389 - Cerk protein_coding retained_intron MGP_129S1SvImJ_T0042130.1 MGP_129S1SvImJ_G0022202.1 mouse_genomes_project 15 87092352 87145332 - MGP_129S1SvImJ_P0042130 Cerk protein_coding protein_coding MGP_129S1SvImJ_T0042131.1 MGP_129S1SvImJ_G0022202.1 mouse_genomes_project 15 87093544 87105677 - MGP_129S1SvImJ_P0042131 Cerk protein_coding protein_coding MGP_129S1SvImJ_T0003615.1 MGP_129S1SvImJ_G0003277.1 mouse_genomes_project 15 2083221 2094057 - Gm15938 antisense antisense MGP_129S1SvImJ_T0011403.1 MGP_129S1SvImJ_G0009519.1 mouse_genomes_project 15 9184308 9184568 + Gm24074 misc_RNA misc_RNA MGP_129S1SvImJ_T0010097.1 MGP_129S1SvImJ_G0008213.1 mouse_genomes_project 15 84926669 84926777 + Mir6392 miRNA miRNA MGP_129S1SvImJ_T0041527.1 MGP_129S1SvImJ_G0022017.1 mouse_genomes_project 15 77032244 77057015 - MGP_129S1SvImJ_P0041527 Zfp647 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040784.1 MGP_129S1SvImJ_G0021788.1 mouse_genomes_project 15 34297683 34307137 - MGP_129S1SvImJ_P0040784 Cox6c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040785.1 MGP_129S1SvImJ_G0021788.1 mouse_genomes_project 15 34303801 34310035 - MGP_129S1SvImJ_P0040785 Cox6c protein_coding protein_coding MGP_129S1SvImJ_T0040786.1 MGP_129S1SvImJ_G0021788.1 mouse_genomes_project 15 34303805 34309434 - MGP_129S1SvImJ_P0040786 Cox6c protein_coding protein_coding MGP_129S1SvImJ_T0040787.1 MGP_129S1SvImJ_G0021788.1 mouse_genomes_project 15 34303808 34309996 - Cox6c protein_coding retained_intron MGP_129S1SvImJ_T0040788.1 MGP_129S1SvImJ_G0021788.1 mouse_genomes_project 15 34307192 34309798 - MGP_129S1SvImJ_P0040788 Cox6c protein_coding protein_coding MGP_129S1SvImJ_T0040812.1 MGP_129S1SvImJ_G0021797.1 mouse_genomes_project 15 35028562 35028956 - MGP_129S1SvImJ_P0040812 Gm8186 protein_coding protein_coding MGP_129S1SvImJ_T0041171.1 MGP_129S1SvImJ_G0021922.1 mouse_genomes_project 15 73321434 73349388 - MGP_129S1SvImJ_P0041171 Slc45a4 protein_coding protein_coding MGP_129S1SvImJ_T0041172.1 MGP_129S1SvImJ_G0021922.1 mouse_genomes_project 15 73321444 73369833 - MGP_129S1SvImJ_P0041172 Slc45a4 protein_coding protein_coding MGP_129S1SvImJ_T0041173.1 MGP_129S1SvImJ_G0021922.1 mouse_genomes_project 15 73324291 73349426 - MGP_129S1SvImJ_P0041173 Slc45a4 protein_coding protein_coding MGP_129S1SvImJ_T0041174.1 MGP_129S1SvImJ_G0021922.1 mouse_genomes_project 15 73324291 73361299 - MGP_129S1SvImJ_P0041174 Slc45a4 protein_coding protein_coding MGP_129S1SvImJ_T0041175.1 MGP_129S1SvImJ_G0021922.1 mouse_genomes_project 15 73324294 73369833 - MGP_129S1SvImJ_P0041175 Slc45a4 protein_coding protein_coding MGP_129S1SvImJ_T0041176.1 MGP_129S1SvImJ_G0021922.1 mouse_genomes_project 15 73330902 73332966 - MGP_129S1SvImJ_P0041176 Slc45a4 protein_coding protein_coding MGP_129S1SvImJ_T0041177.1 MGP_129S1SvImJ_G0021922.1 mouse_genomes_project 15 73349499 73392115 - MGP_129S1SvImJ_P0041177 Slc45a4 protein_coding protein_coding MGP_129S1SvImJ_T0041178.1 MGP_129S1SvImJ_G0021922.1 mouse_genomes_project 15 73349854 73390204 - Slc45a4 protein_coding processed_transcript MGP_129S1SvImJ_T0010093.1 MGP_129S1SvImJ_G0008209.1 mouse_genomes_project 15 83382141 83382201 - Mir7684 miRNA miRNA MGP_129S1SvImJ_T0040766.1 MGP_129S1SvImJ_G0021781.1 mouse_genomes_project 15 32796119 32807333 - MGP_129S1SvImJ_P0040766 Rida protein_coding protein_coding MGP_129S1SvImJ_T0040767.1 MGP_129S1SvImJ_G0021781.1 mouse_genomes_project 15 32796122 32801880 - Rida protein_coding retained_intron MGP_129S1SvImJ_T0040768.1 MGP_129S1SvImJ_G0021781.1 mouse_genomes_project 15 32796992 32807249 - Rida protein_coding retained_intron MGP_129S1SvImJ_T0040769.1 MGP_129S1SvImJ_G0021781.1 mouse_genomes_project 15 32797702 32801766 - Rida protein_coding processed_transcript MGP_129S1SvImJ_T0040475.1 MGP_129S1SvImJ_G0021688.1 mouse_genomes_project 15 1781930 1851901 + MGP_129S1SvImJ_P0040475 Mroh2b protein_coding protein_coding MGP_129S1SvImJ_T0042833.1 MGP_129S1SvImJ_G0022425.1 mouse_genomes_project 15 105171007 105172869 + MGP_129S1SvImJ_P0042833 Hoxc12 protein_coding protein_coding MGP_129S1SvImJ_T0040918.1 MGP_129S1SvImJ_G0021836.1 mouse_genomes_project 15 49524001 49772276 - MGP_129S1SvImJ_P0040918 Trps1 protein_coding protein_coding MGP_129S1SvImJ_T0040919.1 MGP_129S1SvImJ_G0021836.1 mouse_genomes_project 15 49527661 49772293 - MGP_129S1SvImJ_P0040919 Trps1 protein_coding protein_coding MGP_129S1SvImJ_T0040920.1 MGP_129S1SvImJ_G0021836.1 mouse_genomes_project 15 49527679 49771604 - MGP_129S1SvImJ_P0040920 Trps1 protein_coding protein_coding MGP_129S1SvImJ_T0040921.1 MGP_129S1SvImJ_G0021836.1 mouse_genomes_project 15 49529683 49771601 - MGP_129S1SvImJ_P0040921 Trps1 protein_coding protein_coding MGP_129S1SvImJ_T0040922.1 MGP_129S1SvImJ_G0021836.1 mouse_genomes_project 15 49529684 49765358 - MGP_129S1SvImJ_P0040922 Trps1 protein_coding protein_coding MGP_129S1SvImJ_T0040923.1 MGP_129S1SvImJ_G0021836.1 mouse_genomes_project 15 49529700 49772295 - MGP_129S1SvImJ_P0040923 Trps1 protein_coding protein_coding MGP_129S1SvImJ_T0040924.1 MGP_129S1SvImJ_G0021836.1 mouse_genomes_project 15 49698492 49706524 - MGP_129S1SvImJ_P0040924 Trps1 protein_coding protein_coding MGP_129S1SvImJ_T0040925.1 MGP_129S1SvImJ_G0021836.1 mouse_genomes_project 15 49728644 49773538 - MGP_129S1SvImJ_P0040925 Trps1 protein_coding protein_coding MGP_129S1SvImJ_T0042505.1 MGP_129S1SvImJ_G0022318.1 mouse_genomes_project 15 100789519 100789834 + MGP_129S1SvImJ_P0042505 Gm8973 protein_coding protein_coding MGP_129S1SvImJ_T0013121.1 MGP_129S1SvImJ_G0011210.1 mouse_genomes_project 15 91825147 91825630 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013074.1 MGP_129S1SvImJ_G0011163.1 mouse_genomes_project 15 7669680 7670939 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0040523.1 MGP_129S1SvImJ_G0021701.1 mouse_genomes_project 15 4220387 4410166 - MGP_129S1SvImJ_P0040523 Egflam protein_coding protein_coding MGP_129S1SvImJ_T0040524.1 MGP_129S1SvImJ_G0021701.1 mouse_genomes_project 15 4220845 4410213 - MGP_129S1SvImJ_P0040524 Egflam protein_coding protein_coding MGP_129S1SvImJ_T0040525.1 MGP_129S1SvImJ_G0021701.1 mouse_genomes_project 15 4220850 4410257 - MGP_129S1SvImJ_P0040525 Egflam protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040526.1 MGP_129S1SvImJ_G0021701.1 mouse_genomes_project 15 4226437 4237047 - Egflam protein_coding retained_intron MGP_129S1SvImJ_T0040527.1 MGP_129S1SvImJ_G0021701.1 mouse_genomes_project 15 4248269 4410131 - Egflam protein_coding retained_intron MGP_129S1SvImJ_T0040528.1 MGP_129S1SvImJ_G0021701.1 mouse_genomes_project 15 4269872 4271130 - Egflam protein_coding processed_transcript MGP_129S1SvImJ_T0040529.1 MGP_129S1SvImJ_G0021701.1 mouse_genomes_project 15 4317883 4410123 - Egflam protein_coding retained_intron MGP_129S1SvImJ_T0040506.1 MGP_129S1SvImJ_G0021697.1 mouse_genomes_project 15 3542661 3648148 + MGP_129S1SvImJ_P0040506 Fyb protein_coding protein_coding MGP_129S1SvImJ_T0040507.1 MGP_129S1SvImJ_G0021697.1 mouse_genomes_project 15 3556996 3598862 + Fyb protein_coding retained_intron MGP_129S1SvImJ_T0040508.1 MGP_129S1SvImJ_G0021697.1 mouse_genomes_project 15 3562107 3615256 + MGP_129S1SvImJ_P0040508 Fyb protein_coding protein_coding MGP_129S1SvImJ_T0040509.1 MGP_129S1SvImJ_G0021697.1 mouse_genomes_project 15 3597847 3612850 + Fyb protein_coding retained_intron MGP_129S1SvImJ_T0040510.1 MGP_129S1SvImJ_G0021697.1 mouse_genomes_project 15 3626067 3645852 + MGP_129S1SvImJ_P0040510 Fyb protein_coding protein_coding MGP_129S1SvImJ_T0040511.1 MGP_129S1SvImJ_G0021697.1 mouse_genomes_project 15 3628446 3634244 + Fyb protein_coding retained_intron MGP_129S1SvImJ_T0040512.1 MGP_129S1SvImJ_G0021697.1 mouse_genomes_project 15 3645380 3648227 + Fyb protein_coding retained_intron MGP_129S1SvImJ_T0042085.1 MGP_129S1SvImJ_G0022186.1 mouse_genomes_project 15 85836441 85841861 + MGP_129S1SvImJ_P0042085 Upk3a protein_coding protein_coding MGP_129S1SvImJ_T0041336.1 MGP_129S1SvImJ_G0021976.1 mouse_genomes_project 15 76173773 76180853 - MGP_129S1SvImJ_P0041336 BC024139 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041337.1 MGP_129S1SvImJ_G0021976.1 mouse_genomes_project 15 76173776 76180799 - MGP_129S1SvImJ_P0041337 BC024139 protein_coding protein_coding MGP_129S1SvImJ_T0041338.1 MGP_129S1SvImJ_G0021976.1 mouse_genomes_project 15 76173777 76180813 - MGP_129S1SvImJ_P0041338 BC024139 protein_coding protein_coding MGP_129S1SvImJ_T0041339.1 MGP_129S1SvImJ_G0021976.1 mouse_genomes_project 15 76177065 76180328 - BC024139 protein_coding processed_transcript MGP_129S1SvImJ_T0040485.1 MGP_129S1SvImJ_G0021694.1 mouse_genomes_project 15 2115049 2156209 - Ptger4 protein_coding processed_transcript MGP_129S1SvImJ_T0040486.1 MGP_129S1SvImJ_G0021694.1 mouse_genomes_project 15 2146897 2157671 - MGP_129S1SvImJ_P0040486 Ptger4 protein_coding protein_coding MGP_129S1SvImJ_T0040487.1 MGP_129S1SvImJ_G0021694.1 mouse_genomes_project 15 2146897 2157686 - MGP_129S1SvImJ_P0040487 Ptger4 protein_coding protein_coding MGP_129S1SvImJ_T0013093.1 MGP_129S1SvImJ_G0011182.1 mouse_genomes_project 15 39660861 39661035 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0041855.1 MGP_129S1SvImJ_G0022114.1 mouse_genomes_project 15 81923186 81923651 - MGP_129S1SvImJ_P0041855 Gm5218 protein_coding protein_coding MGP_129S1SvImJ_T0041440.1 MGP_129S1SvImJ_G0021994.1 mouse_genomes_project 15 76552170 76578960 + MGP_129S1SvImJ_P0041440 Hsf1 protein_coding protein_coding MGP_129S1SvImJ_T0041441.1 MGP_129S1SvImJ_G0021994.1 mouse_genomes_project 15 76552326 76578610 + MGP_129S1SvImJ_P0041441 Hsf1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040927.1 MGP_129S1SvImJ_G0021838.1 mouse_genomes_project 15 50827112 50836681 + MGP_129S1SvImJ_P0040927 Utp23 protein_coding protein_coding MGP_129S1SvImJ_T0040928.1 MGP_129S1SvImJ_G0021838.1 mouse_genomes_project 15 50827161 50832513 + MGP_129S1SvImJ_P0040928 Utp23 protein_coding protein_coding MGP_129S1SvImJ_T0040929.1 MGP_129S1SvImJ_G0021838.1 mouse_genomes_project 15 50827188 50832508 + MGP_129S1SvImJ_P0040929 Utp23 protein_coding protein_coding MGP_129S1SvImJ_T0040930.1 MGP_129S1SvImJ_G0021838.1 mouse_genomes_project 15 50827425 50832507 + MGP_129S1SvImJ_P0040930 Utp23 protein_coding protein_coding MGP_129S1SvImJ_T0042198.1 MGP_129S1SvImJ_G0022223.1 mouse_genomes_project 15 90390583 90471139 + MGP_129S1SvImJ_P0042198 Ppp6r2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042199.1 MGP_129S1SvImJ_G0022223.1 mouse_genomes_project 15 90435483 90471254 + MGP_129S1SvImJ_P0042199 Ppp6r2 protein_coding protein_coding MGP_129S1SvImJ_T0040805.1 MGP_129S1SvImJ_G0021796.1 mouse_genomes_project 15 34984272 35000978 - MGP_129S1SvImJ_P0040805 Pabpc1 protein_coding protein_coding MGP_129S1SvImJ_T0040806.1 MGP_129S1SvImJ_G0021796.1 mouse_genomes_project 15 34985083 34987372 - Pabpc1 protein_coding processed_transcript MGP_129S1SvImJ_T0040807.1 MGP_129S1SvImJ_G0021796.1 mouse_genomes_project 15 34985083 34986486 - Pabpc1 protein_coding processed_transcript MGP_129S1SvImJ_T0040808.1 MGP_129S1SvImJ_G0021796.1 mouse_genomes_project 15 34985260 34986796 - Pabpc1 protein_coding processed_transcript MGP_129S1SvImJ_T0040809.1 MGP_129S1SvImJ_G0021796.1 mouse_genomes_project 15 34985622 35001023 - MGP_129S1SvImJ_P0040809 Pabpc1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040810.1 MGP_129S1SvImJ_G0021796.1 mouse_genomes_project 15 34987360 34991410 - Pabpc1 protein_coding processed_transcript MGP_129S1SvImJ_T0040811.1 MGP_129S1SvImJ_G0021796.1 mouse_genomes_project 15 34993897 35000978 - Pabpc1 protein_coding processed_transcript MGP_129S1SvImJ_T0040931.1 MGP_129S1SvImJ_G0021839.1 mouse_genomes_project 15 50915803 50952041 - MGP_129S1SvImJ_P0040931 Rad21 protein_coding protein_coding MGP_129S1SvImJ_T0042686.1 MGP_129S1SvImJ_G0022369.1 mouse_genomes_project 15 103335527 103342161 + MGP_129S1SvImJ_P0042686 Atg101 protein_coding protein_coding MGP_129S1SvImJ_T0041709.1 MGP_129S1SvImJ_G0022074.1 mouse_genomes_project 15 79683608 79707653 - MGP_129S1SvImJ_P0041709 Csnk1e protein_coding protein_coding MGP_129S1SvImJ_T0041710.1 MGP_129S1SvImJ_G0022074.1 mouse_genomes_project 15 79684879 79687046 - Csnk1e protein_coding retained_intron MGP_129S1SvImJ_T0041711.1 MGP_129S1SvImJ_G0022074.1 mouse_genomes_project 15 79684898 79709851 - MGP_129S1SvImJ_P0041711 Csnk1e protein_coding protein_coding MGP_129S1SvImJ_T0041712.1 MGP_129S1SvImJ_G0022074.1 mouse_genomes_project 15 79688217 79707486 - MGP_129S1SvImJ_P0041712 Csnk1e protein_coding protein_coding MGP_129S1SvImJ_T0041713.1 MGP_129S1SvImJ_G0022074.1 mouse_genomes_project 15 79689379 79690035 - Csnk1e protein_coding retained_intron MGP_129S1SvImJ_T0041714.1 MGP_129S1SvImJ_G0022074.1 mouse_genomes_project 15 79689901 79691295 - Csnk1e protein_coding retained_intron MGP_129S1SvImJ_T0041715.1 MGP_129S1SvImJ_G0022074.1 mouse_genomes_project 15 79690473 79692180 - Csnk1e protein_coding retained_intron MGP_129S1SvImJ_T0041716.1 MGP_129S1SvImJ_G0022074.1 mouse_genomes_project 15 79690591 79695596 - Csnk1e protein_coding retained_intron MGP_129S1SvImJ_T0041717.1 MGP_129S1SvImJ_G0022074.1 mouse_genomes_project 15 79692134 79704689 - MGP_129S1SvImJ_P0041717 Csnk1e protein_coding protein_coding MGP_129S1SvImJ_T0041718.1 MGP_129S1SvImJ_G0022074.1 mouse_genomes_project 15 79692203 79707486 - MGP_129S1SvImJ_P0041718 Csnk1e protein_coding protein_coding MGP_129S1SvImJ_T0041719.1 MGP_129S1SvImJ_G0022074.1 mouse_genomes_project 15 79695775 79711769 - MGP_129S1SvImJ_P0041719 Csnk1e protein_coding protein_coding MGP_129S1SvImJ_T0041404.1 MGP_129S1SvImJ_G0021987.1 mouse_genomes_project 15 76422435 76425514 + MGP_129S1SvImJ_P0041404 Maf1 protein_coding protein_coding MGP_129S1SvImJ_T0041405.1 MGP_129S1SvImJ_G0021987.1 mouse_genomes_project 15 76422435 76425515 + MGP_129S1SvImJ_P0041405 Maf1 protein_coding protein_coding MGP_129S1SvImJ_T0041406.1 MGP_129S1SvImJ_G0021987.1 mouse_genomes_project 15 76422447 76425515 + MGP_129S1SvImJ_P0041406 Maf1 protein_coding protein_coding MGP_129S1SvImJ_T0041407.1 MGP_129S1SvImJ_G0021987.1 mouse_genomes_project 15 76422450 76424148 + Maf1 protein_coding retained_intron MGP_129S1SvImJ_T0041408.1 MGP_129S1SvImJ_G0021987.1 mouse_genomes_project 15 76422468 76423589 + Maf1 protein_coding processed_transcript MGP_129S1SvImJ_T0041409.1 MGP_129S1SvImJ_G0021987.1 mouse_genomes_project 15 76422468 76425522 + MGP_129S1SvImJ_P0041409 Maf1 protein_coding protein_coding MGP_129S1SvImJ_T0041410.1 MGP_129S1SvImJ_G0021987.1 mouse_genomes_project 15 76422494 76423209 + Maf1 protein_coding retained_intron MGP_129S1SvImJ_T0041411.1 MGP_129S1SvImJ_G0021987.1 mouse_genomes_project 15 76422550 76424041 + Maf1 protein_coding retained_intron MGP_129S1SvImJ_T0041412.1 MGP_129S1SvImJ_G0021987.1 mouse_genomes_project 15 76423147 76424328 + MGP_129S1SvImJ_P0041412 Maf1 protein_coding protein_coding MGP_129S1SvImJ_T0041413.1 MGP_129S1SvImJ_G0021987.1 mouse_genomes_project 15 76423175 76424042 + Maf1 protein_coding retained_intron MGP_129S1SvImJ_T0041414.1 MGP_129S1SvImJ_G0021987.1 mouse_genomes_project 15 76423911 76425133 + Maf1 protein_coding retained_intron MGP_129S1SvImJ_T0041415.1 MGP_129S1SvImJ_G0021987.1 mouse_genomes_project 15 76424035 76425168 + Maf1 protein_coding retained_intron MGP_129S1SvImJ_T0041416.1 MGP_129S1SvImJ_G0021987.1 mouse_genomes_project 15 76424242 76425215 + Maf1 protein_coding retained_intron MGP_129S1SvImJ_T0041417.1 MGP_129S1SvImJ_G0021987.1 mouse_genomes_project 15 76424556 76425257 + MGP_129S1SvImJ_P0041417 Maf1 protein_coding protein_coding MGP_129S1SvImJ_T0006751.1 MGP_129S1SvImJ_G0005581.1 mouse_genomes_project 15 7867652 7935262 + 4930556M19Rik lincRNA lincRNA MGP_129S1SvImJ_T0042261.1 MGP_129S1SvImJ_G0022239.1 mouse_genomes_project 15 90705230 90771371 + MGP_129S1SvImJ_P0042261 Shank3 protein_coding protein_coding MGP_129S1SvImJ_T0042262.1 MGP_129S1SvImJ_G0022239.1 mouse_genomes_project 15 90705328 90771371 + MGP_129S1SvImJ_P0042262 Shank3 protein_coding protein_coding MGP_129S1SvImJ_T0042263.1 MGP_129S1SvImJ_G0022239.1 mouse_genomes_project 15 90705594 90708895 + Shank3 protein_coding processed_transcript MGP_129S1SvImJ_T0042264.1 MGP_129S1SvImJ_G0022239.1 mouse_genomes_project 15 90706754 90771369 + MGP_129S1SvImJ_P0042264 Shank3 protein_coding protein_coding MGP_129S1SvImJ_T0042265.1 MGP_129S1SvImJ_G0022239.1 mouse_genomes_project 15 90733444 90743528 + Shank3 protein_coding processed_transcript MGP_129S1SvImJ_T0042266.1 MGP_129S1SvImJ_G0022239.1 mouse_genomes_project 15 90739929 90741542 + Shank3 protein_coding processed_transcript MGP_129S1SvImJ_T0042267.1 MGP_129S1SvImJ_G0022239.1 mouse_genomes_project 15 90742023 90752924 + MGP_129S1SvImJ_P0042267 Shank3 protein_coding protein_coding MGP_129S1SvImJ_T0042124.1 MGP_129S1SvImJ_G0022201.1 mouse_genomes_project 15 87010096 87090948 + MGP_129S1SvImJ_P0042124 Gramd4 protein_coding protein_coding MGP_129S1SvImJ_T0042125.1 MGP_129S1SvImJ_G0022201.1 mouse_genomes_project 15 87011128 87090932 + MGP_129S1SvImJ_P0042125 Gramd4 protein_coding protein_coding MGP_129S1SvImJ_T0042126.1 MGP_129S1SvImJ_G0022201.1 mouse_genomes_project 15 87011273 87090945 + MGP_129S1SvImJ_P0042126 Gramd4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042127.1 MGP_129S1SvImJ_G0022201.1 mouse_genomes_project 15 87020164 87075625 + Gramd4 protein_coding processed_transcript MGP_129S1SvImJ_T0042128.1 MGP_129S1SvImJ_G0022201.1 mouse_genomes_project 15 87027015 87044022 + Gramd4 protein_coding processed_transcript MGP_129S1SvImJ_T0101634.1 MGP_129S1SvImJ_G0039670.1 mouse_genomes_project 15 31708653 31710641 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101635.1 MGP_129S1SvImJ_G0039670.1 mouse_genomes_project 15 31709867 31710604 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0041970.1 MGP_129S1SvImJ_G0022154.1 mouse_genomes_project 15 83416103 83424059 - MGP_129S1SvImJ_P0041970 Cyp2d26 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0041971.1 MGP_129S1SvImJ_G0022154.1 mouse_genomes_project 15 83416109 83424131 - MGP_129S1SvImJ_P0041971 Cyp2d26 protein_coding protein_coding MGP_129S1SvImJ_T0040609.1 MGP_129S1SvImJ_G0021723.1 mouse_genomes_project 15 7624800 7632462 + MGP_129S1SvImJ_P0040609 Rad1 protein_coding protein_coding MGP_129S1SvImJ_T0040610.1 MGP_129S1SvImJ_G0021723.1 mouse_genomes_project 15 7624831 7632457 + Rad1 protein_coding retained_intron MGP_129S1SvImJ_T0040611.1 MGP_129S1SvImJ_G0021723.1 mouse_genomes_project 15 7624851 7638706 + MGP_129S1SvImJ_P0040611 Rad1 protein_coding protein_coding MGP_129S1SvImJ_T0040612.1 MGP_129S1SvImJ_G0021723.1 mouse_genomes_project 15 7624862 7629130 + MGP_129S1SvImJ_P0040612 Rad1 protein_coding protein_coding MGP_129S1SvImJ_T0040613.1 MGP_129S1SvImJ_G0021723.1 mouse_genomes_project 15 7625257 7632136 + MGP_129S1SvImJ_P0040613 Rad1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040614.1 MGP_129S1SvImJ_G0021723.1 mouse_genomes_project 15 7625391 7632447 + MGP_129S1SvImJ_P0040614 Rad1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042365.1 MGP_129S1SvImJ_G0022270.1 mouse_genomes_project 15 98162539 98232714 - MGP_129S1SvImJ_P0042365 Slc38a1 protein_coding protein_coding MGP_129S1SvImJ_T0042366.1 MGP_129S1SvImJ_G0022270.1 mouse_genomes_project 15 98162539 98232333 - MGP_129S1SvImJ_P0042366 Slc38a1 protein_coding protein_coding MGP_129S1SvImJ_T0042367.1 MGP_129S1SvImJ_G0022270.1 mouse_genomes_project 15 98162539 98233236 - MGP_129S1SvImJ_P0042367 Slc38a1 protein_coding protein_coding MGP_129S1SvImJ_T0041544.1 MGP_129S1SvImJ_G0022023.1 mouse_genomes_project 15 77554707 77566986 - MGP_129S1SvImJ_P0041544 protein_coding protein_coding MGP_129S1SvImJ_T0041545.1 MGP_129S1SvImJ_G0022023.1 mouse_genomes_project 15 77554708 77566962 - MGP_129S1SvImJ_P0041545 protein_coding protein_coding MGP_129S1SvImJ_T0041546.1 MGP_129S1SvImJ_G0022023.1 mouse_genomes_project 15 77555443 77564139 - MGP_129S1SvImJ_P0041546 protein_coding protein_coding MGP_129S1SvImJ_T0041547.1 MGP_129S1SvImJ_G0022023.1 mouse_genomes_project 15 77561013 77564615 - protein_coding retained_intron MGP_129S1SvImJ_T0041548.1 MGP_129S1SvImJ_G0022023.1 mouse_genomes_project 15 77561095 77566241 - MGP_129S1SvImJ_P0041548 protein_coding protein_coding MGP_129S1SvImJ_T0042112.1 MGP_129S1SvImJ_G0022198.1 mouse_genomes_project 15 86786508 86805461 + MGP_129S1SvImJ_P0042112 Gtse1 protein_coding protein_coding MGP_129S1SvImJ_T0010102.1 MGP_129S1SvImJ_G0008218.1 mouse_genomes_project 15 88866463 88866557 - Mir6393 miRNA miRNA MGP_129S1SvImJ_T0010058.1 MGP_129S1SvImJ_G0008174.1 mouse_genomes_project 15 37009014 37009089 - Mir6951 miRNA miRNA MGP_129S1SvImJ_T0041307.1 MGP_129S1SvImJ_G0021966.1 mouse_genomes_project 15 75974151 75979198 - MGP_129S1SvImJ_P0041307 Tsta3 protein_coding protein_coding MGP_129S1SvImJ_T0041512.1 MGP_129S1SvImJ_G0022012.1 mouse_genomes_project 15 76826496 76929608 - MGP_129S1SvImJ_P0041512 Arhgap39 protein_coding protein_coding MGP_129S1SvImJ_T0041513.1 MGP_129S1SvImJ_G0022012.1 mouse_genomes_project 15 76826496 76929521 - MGP_129S1SvImJ_P0041513 Arhgap39 protein_coding protein_coding MGP_129S1SvImJ_T0041514.1 MGP_129S1SvImJ_G0022012.1 mouse_genomes_project 15 76827371 76828115 - Arhgap39 protein_coding retained_intron MGP_129S1SvImJ_T0041515.1 MGP_129S1SvImJ_G0022012.1 mouse_genomes_project 15 76838822 76929567 - Arhgap39 protein_coding retained_intron MGP_129S1SvImJ_T0041516.1 MGP_129S1SvImJ_G0022012.1 mouse_genomes_project 15 76857012 76901444 - MGP_129S1SvImJ_P0041516 Arhgap39 protein_coding protein_coding MGP_129S1SvImJ_T0041517.1 MGP_129S1SvImJ_G0022012.1 mouse_genomes_project 15 76863376 76929544 - MGP_129S1SvImJ_P0041517 Arhgap39 protein_coding protein_coding MGP_129S1SvImJ_T0041518.1 MGP_129S1SvImJ_G0022012.1 mouse_genomes_project 15 76863380 76929434 - MGP_129S1SvImJ_P0041518 Arhgap39 protein_coding protein_coding MGP_129S1SvImJ_T0041519.1 MGP_129S1SvImJ_G0022012.1 mouse_genomes_project 15 76870377 76929579 - Arhgap39 protein_coding retained_intron MGP_129S1SvImJ_T0041520.1 MGP_129S1SvImJ_G0022012.1 mouse_genomes_project 15 76870827 76929408 - MGP_129S1SvImJ_P0041520 Arhgap39 protein_coding protein_coding MGP_129S1SvImJ_T0041521.1 MGP_129S1SvImJ_G0022012.1 mouse_genomes_project 15 76870843 76929514 - MGP_129S1SvImJ_P0041521 Arhgap39 protein_coding protein_coding MGP_129S1SvImJ_T0042012.1 MGP_129S1SvImJ_G0022163.1 mouse_genomes_project 15 84073120 84134269 - MGP_129S1SvImJ_P0042012 Pacsin2 protein_coding protein_coding MGP_129S1SvImJ_T0042013.1 MGP_129S1SvImJ_G0022163.1 mouse_genomes_project 15 84073120 84169767 - MGP_129S1SvImJ_P0042013 Pacsin2 protein_coding protein_coding MGP_129S1SvImJ_T0042014.1 MGP_129S1SvImJ_G0022163.1 mouse_genomes_project 15 84073632 84169731 - MGP_129S1SvImJ_P0042014 Pacsin2 protein_coding protein_coding MGP_129S1SvImJ_T0099471.1 MGP_129S1SvImJ_G0037538.1 mouse_genomes_project 15 80396430 80396537 - Gm24204 snRNA snRNA MGP_129S1SvImJ_T0006813.1 MGP_129S1SvImJ_G0005621.1 mouse_genomes_project 15 97799449 97808887 - 4833422M21Rik lincRNA lincRNA MGP_129S1SvImJ_T0006814.1 MGP_129S1SvImJ_G0005621.1 mouse_genomes_project 15 97799449 97822855 - 4833422M21Rik lincRNA lincRNA MGP_129S1SvImJ_T0006815.1 MGP_129S1SvImJ_G0005621.1 mouse_genomes_project 15 97817125 97822787 - 4833422M21Rik lincRNA lincRNA MGP_129S1SvImJ_T0042848.1 MGP_129S1SvImJ_G0022434.1 mouse_genomes_project 15 105436306 105491911 - MGP_129S1SvImJ_P0042848 Cbx5 protein_coding protein_coding MGP_129S1SvImJ_T0042849.1 MGP_129S1SvImJ_G0022434.1 mouse_genomes_project 15 105441449 105460130 - MGP_129S1SvImJ_P0042849 Cbx5 protein_coding protein_coding MGP_129S1SvImJ_T0042850.1 MGP_129S1SvImJ_G0022434.1 mouse_genomes_project 15 105444017 105460083 - MGP_129S1SvImJ_P0042850 Cbx5 protein_coding protein_coding MGP_129S1SvImJ_T0042851.1 MGP_129S1SvImJ_G0022434.1 mouse_genomes_project 15 105457859 105460144 - MGP_129S1SvImJ_P0042851 Cbx5 protein_coding protein_coding MGP_129S1SvImJ_T0040461.1 MGP_129S1SvImJ_G0021685.1 mouse_genomes_project 15 893830 1034490 + MGP_129S1SvImJ_P0040461 Oxct1 protein_coding protein_coding MGP_129S1SvImJ_T0040462.1 MGP_129S1SvImJ_G0021685.1 mouse_genomes_project 15 894131 1033109 + MGP_129S1SvImJ_P0040462 Oxct1 protein_coding protein_coding MGP_129S1SvImJ_T0040463.1 MGP_129S1SvImJ_G0021685.1 mouse_genomes_project 15 914627 960668 + Oxct1 protein_coding processed_transcript MGP_129S1SvImJ_T0040464.1 MGP_129S1SvImJ_G0021685.1 mouse_genomes_project 15 1019190 1033126 + Oxct1 protein_coding processed_transcript MGP_129S1SvImJ_T0040465.1 MGP_129S1SvImJ_G0021685.1 mouse_genomes_project 15 1019479 1033105 + Oxct1 protein_coding processed_transcript MGP_129S1SvImJ_T0041832.1 MGP_129S1SvImJ_G0022107.1 mouse_genomes_project 15 81413702 81509407 - MGP_129S1SvImJ_P0041832 Mkl1 protein_coding protein_coding MGP_129S1SvImJ_T0041833.1 MGP_129S1SvImJ_G0022107.1 mouse_genomes_project 15 81414696 81531294 - MGP_129S1SvImJ_P0041833 Mkl1 protein_coding protein_coding MGP_129S1SvImJ_T0041834.1 MGP_129S1SvImJ_G0022107.1 mouse_genomes_project 15 81417265 81448674 - MGP_129S1SvImJ_P0041834 Mkl1 protein_coding protein_coding MGP_129S1SvImJ_T0041835.1 MGP_129S1SvImJ_G0022107.1 mouse_genomes_project 15 81418174 81419600 - Mkl1 protein_coding retained_intron MGP_129S1SvImJ_T0041836.1 MGP_129S1SvImJ_G0022107.1 mouse_genomes_project 15 81421649 81422714 - Mkl1 protein_coding retained_intron MGP_129S1SvImJ_T0041837.1 MGP_129S1SvImJ_G0022107.1 mouse_genomes_project 15 81423900 81425350 - Mkl1 protein_coding retained_intron MGP_129S1SvImJ_T0041838.1 MGP_129S1SvImJ_G0022107.1 mouse_genomes_project 15 81427745 81594794 - Mkl1 protein_coding retained_intron MGP_129S1SvImJ_T0041839.1 MGP_129S1SvImJ_G0022107.1 mouse_genomes_project 15 81448260 81594588 - Mkl1 protein_coding retained_intron MGP_129S1SvImJ_T0040627.1 MGP_129S1SvImJ_G0021732.1 mouse_genomes_project 15 9047702 9120446 - MGP_129S1SvImJ_P0040627 Npr3 protein_coding protein_coding MGP_129S1SvImJ_T0098834.1 MGP_129S1SvImJ_G0036915.1 mouse_genomes_project 15 72499692 72504417 - Peg13 sense_intronic sense_intronic MGP_129S1SvImJ_T0042577.1 MGP_129S1SvImJ_G0022343.1 mouse_genomes_project 15 101614290 101657102 - MGP_129S1SvImJ_P0042577 Cers5 protein_coding protein_coding MGP_129S1SvImJ_T0042578.1 MGP_129S1SvImJ_G0022343.1 mouse_genomes_project 15 101614720 101657105 - MGP_129S1SvImJ_P0042578 Cers5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042579.1 MGP_129S1SvImJ_G0022343.1 mouse_genomes_project 15 101615028 101657241 - MGP_129S1SvImJ_P0042579 Cers5 protein_coding protein_coding MGP_129S1SvImJ_T0042580.1 MGP_129S1SvImJ_G0022343.1 mouse_genomes_project 15 101616774 101626681 - MGP_129S1SvImJ_P0042580 Cers5 protein_coding protein_coding MGP_129S1SvImJ_T0042581.1 MGP_129S1SvImJ_G0022343.1 mouse_genomes_project 15 101618842 101657514 - MGP_129S1SvImJ_P0042581 Cers5 protein_coding protein_coding MGP_129S1SvImJ_T0042582.1 MGP_129S1SvImJ_G0022343.1 mouse_genomes_project 15 101625398 101656732 - MGP_129S1SvImJ_P0042582 Cers5 protein_coding protein_coding MGP_129S1SvImJ_T0102252.1 MGP_129S1SvImJ_G0040086.1 mouse_genomes_project 15 74734754 74735607 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099464.1 MGP_129S1SvImJ_G0037531.1 mouse_genomes_project 15 72405866 72405933 - Gm28020 snRNA snRNA MGP_129S1SvImJ_T0017492.1 MGP_129S1SvImJ_G0015298.1 mouse_genomes_project 15 66492930 66530478 + Gm2895 processed_transcript processed_transcript MGP_129S1SvImJ_T0042779.1 MGP_129S1SvImJ_G0022414.1 mouse_genomes_project 15 104644884 104646446 + MGP_129S1SvImJ_P0042779 Prr13 protein_coding protein_coding MGP_129S1SvImJ_T0042780.1 MGP_129S1SvImJ_G0022414.1 mouse_genomes_project 15 104645031 104648663 + MGP_129S1SvImJ_P0042780 Prr13 protein_coding protein_coding MGP_129S1SvImJ_T0042781.1 MGP_129S1SvImJ_G0022414.1 mouse_genomes_project 15 104645058 104648639 + MGP_129S1SvImJ_P0042781 Prr13 protein_coding protein_coding MGP_129S1SvImJ_T0042782.1 MGP_129S1SvImJ_G0022414.1 mouse_genomes_project 15 104645088 104648641 + MGP_129S1SvImJ_P0042782 Prr13 protein_coding protein_coding MGP_129S1SvImJ_T0042783.1 MGP_129S1SvImJ_G0022414.1 mouse_genomes_project 15 104645940 104648633 + MGP_129S1SvImJ_P0042783 Prr13 protein_coding protein_coding MGP_129S1SvImJ_T0040873.1 MGP_129S1SvImJ_G0021816.1 mouse_genomes_project 15 38196967 38211716 + MGP_129S1SvImJ_P0040873 Dcstamp protein_coding protein_coding MGP_129S1SvImJ_T0041327.1 MGP_129S1SvImJ_G0021973.1 mouse_genomes_project 15 76099219 76121816 - MGP_129S1SvImJ_P0041327 Scrib protein_coding protein_coding MGP_129S1SvImJ_T0041328.1 MGP_129S1SvImJ_G0021973.1 mouse_genomes_project 15 76099219 76114781 - MGP_129S1SvImJ_P0041328 Scrib protein_coding protein_coding MGP_129S1SvImJ_T0041329.1 MGP_129S1SvImJ_G0021973.1 mouse_genomes_project 15 76099219 76121816 - MGP_129S1SvImJ_P0041329 Scrib protein_coding protein_coding MGP_129S1SvImJ_T0041330.1 MGP_129S1SvImJ_G0021973.1 mouse_genomes_project 15 76099219 76121846 - MGP_129S1SvImJ_P0041330 Scrib protein_coding protein_coding MGP_129S1SvImJ_T0041331.1 MGP_129S1SvImJ_G0021973.1 mouse_genomes_project 15 76101001 76102848 - MGP_129S1SvImJ_P0041331 Scrib protein_coding protein_coding MGP_129S1SvImJ_T0041332.1 MGP_129S1SvImJ_G0021973.1 mouse_genomes_project 15 76101264 76102848 - MGP_129S1SvImJ_P0041332 Scrib protein_coding protein_coding MGP_129S1SvImJ_T0041918.1 MGP_129S1SvImJ_G0022129.1 mouse_genomes_project 15 82468937 82505744 + MGP_129S1SvImJ_P0041918 Xrcc6 protein_coding protein_coding MGP_129S1SvImJ_T0041925.1 MGP_129S1SvImJ_G0022129.1 mouse_genomes_project 15 82498839 82523117 + MGP_129S1SvImJ_P0041925 Xrcc6 protein_coding protein_coding MGP_129S1SvImJ_T0041926.1 MGP_129S1SvImJ_G0022129.1 mouse_genomes_project 15 82498877 82508807 + MGP_129S1SvImJ_P0041926 Xrcc6 protein_coding protein_coding MGP_129S1SvImJ_T0041927.1 MGP_129S1SvImJ_G0022129.1 mouse_genomes_project 15 82498928 82508856 + MGP_129S1SvImJ_P0041927 Xrcc6 protein_coding protein_coding MGP_129S1SvImJ_T0041928.1 MGP_129S1SvImJ_G0022129.1 mouse_genomes_project 15 82505452 82506100 + Xrcc6 protein_coding retained_intron MGP_129S1SvImJ_T0041929.1 MGP_129S1SvImJ_G0022129.1 mouse_genomes_project 15 82506145 82510926 + Xrcc6 protein_coding retained_intron MGP_129S1SvImJ_T0041930.1 MGP_129S1SvImJ_G0022129.1 mouse_genomes_project 15 82508558 82512772 + Xrcc6 protein_coding retained_intron MGP_129S1SvImJ_T0041931.1 MGP_129S1SvImJ_G0022129.1 mouse_genomes_project 15 82511233 82523001 + Xrcc6 protein_coding processed_transcript MGP_129S1SvImJ_T0041932.1 MGP_129S1SvImJ_G0022129.1 mouse_genomes_project 15 82512239 82520672 + Xrcc6 protein_coding retained_intron MGP_129S1SvImJ_T0017474.1 MGP_129S1SvImJ_G0015291.1 mouse_genomes_project 15 16297124 16419275 - C030047K22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0041394.1 MGP_129S1SvImJ_G0021986.1 mouse_genomes_project 15 76418181 76422252 - Sharpin protein_coding retained_intron MGP_129S1SvImJ_T0041395.1 MGP_129S1SvImJ_G0021986.1 mouse_genomes_project 15 76418181 76422253 - MGP_129S1SvImJ_P0041395 Sharpin protein_coding protein_coding MGP_129S1SvImJ_T0041396.1 MGP_129S1SvImJ_G0021986.1 mouse_genomes_project 15 76418182 76422189 - Sharpin protein_coding retained_intron MGP_129S1SvImJ_T0041397.1 MGP_129S1SvImJ_G0021986.1 mouse_genomes_project 15 76418182 76422217 - Sharpin protein_coding retained_intron MGP_129S1SvImJ_T0041398.1 MGP_129S1SvImJ_G0021986.1 mouse_genomes_project 15 76418195 76418826 - MGP_129S1SvImJ_P0041398 Sharpin protein_coding protein_coding MGP_129S1SvImJ_T0041399.1 MGP_129S1SvImJ_G0021986.1 mouse_genomes_project 15 76418259 76419337 - Sharpin protein_coding retained_intron MGP_129S1SvImJ_T0041400.1 MGP_129S1SvImJ_G0021986.1 mouse_genomes_project 15 76418770 76421892 - MGP_129S1SvImJ_P0041400 Sharpin protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041401.1 MGP_129S1SvImJ_G0021986.1 mouse_genomes_project 15 76418990 76421833 - Sharpin protein_coding retained_intron MGP_129S1SvImJ_T0041402.1 MGP_129S1SvImJ_G0021986.1 mouse_genomes_project 15 76419038 76421824 - Sharpin protein_coding retained_intron MGP_129S1SvImJ_T0041403.1 MGP_129S1SvImJ_G0021986.1 mouse_genomes_project 15 76419753 76421854 - Sharpin protein_coding retained_intron MGP_129S1SvImJ_T0006821.1 MGP_129S1SvImJ_G0005626.1 mouse_genomes_project 15 103269602 103272528 - A330009N23Rik lincRNA lincRNA MGP_129S1SvImJ_T0042005.1 MGP_129S1SvImJ_G0022160.1 mouse_genomes_project 15 83819427 83837858 - MGP_129S1SvImJ_P0042005 Cyb5r3 protein_coding protein_coding MGP_129S1SvImJ_T0042006.1 MGP_129S1SvImJ_G0022160.1 mouse_genomes_project 15 83822730 83835772 - MGP_129S1SvImJ_P0042006 Cyb5r3 protein_coding protein_coding MGP_129S1SvImJ_T0042007.1 MGP_129S1SvImJ_G0022160.1 mouse_genomes_project 15 83826097 83835441 - MGP_129S1SvImJ_P0042007 Cyb5r3 protein_coding protein_coding MGP_129S1SvImJ_T0042551.1 MGP_129S1SvImJ_G0022333.1 mouse_genomes_project 15 101348046 101382672 - MGP_129S1SvImJ_P0042551 Faim2 protein_coding protein_coding MGP_129S1SvImJ_T0042605.1 MGP_129S1SvImJ_G0022350.1 mouse_genomes_project 15 102345446 102380326 - MGP_129S1SvImJ_P0042605 Slc11a2 protein_coding protein_coding MGP_129S1SvImJ_T0042606.1 MGP_129S1SvImJ_G0022350.1 mouse_genomes_project 15 102349509 102380376 - MGP_129S1SvImJ_P0042606 Slc11a2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042607.1 MGP_129S1SvImJ_G0022350.1 mouse_genomes_project 15 102349961 102380273 - MGP_129S1SvImJ_P0042607 Slc11a2 protein_coding protein_coding MGP_129S1SvImJ_T0042608.1 MGP_129S1SvImJ_G0022350.1 mouse_genomes_project 15 102355034 102360645 - MGP_129S1SvImJ_P0042608 Slc11a2 protein_coding protein_coding MGP_129S1SvImJ_T0042609.1 MGP_129S1SvImJ_G0022350.1 mouse_genomes_project 15 102355222 102360824 - Slc11a2 protein_coding retained_intron MGP_129S1SvImJ_T0042610.1 MGP_129S1SvImJ_G0022350.1 mouse_genomes_project 15 102363806 102382342 - MGP_129S1SvImJ_P0042610 Slc11a2 protein_coding protein_coding MGP_129S1SvImJ_T0042611.1 MGP_129S1SvImJ_G0022350.1 mouse_genomes_project 15 102365671 102380240 - MGP_129S1SvImJ_P0042611 Slc11a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042612.1 MGP_129S1SvImJ_G0022350.1 mouse_genomes_project 15 102366805 102381484 - MGP_129S1SvImJ_P0042612 Slc11a2 protein_coding protein_coding MGP_129S1SvImJ_T0042613.1 MGP_129S1SvImJ_G0022350.1 mouse_genomes_project 15 102367651 102381362 - MGP_129S1SvImJ_P0042613 Slc11a2 protein_coding protein_coding MGP_129S1SvImJ_T0041724.1 MGP_129S1SvImJ_G0022079.1 mouse_genomes_project 15 79897790 79956593 - MGP_129S1SvImJ_P0041724 Fam227a protein_coding protein_coding MGP_129S1SvImJ_T0041725.1 MGP_129S1SvImJ_G0022079.1 mouse_genomes_project 15 79900185 79956430 - MGP_129S1SvImJ_P0041725 Fam227a protein_coding protein_coding MGP_129S1SvImJ_T0041726.1 MGP_129S1SvImJ_G0022079.1 mouse_genomes_project 15 79900239 79956430 - MGP_129S1SvImJ_P0041726 Fam227a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041727.1 MGP_129S1SvImJ_G0022079.1 mouse_genomes_project 15 79913891 79944375 - MGP_129S1SvImJ_P0041727 Fam227a protein_coding protein_coding MGP_129S1SvImJ_T0041728.1 MGP_129S1SvImJ_G0022079.1 mouse_genomes_project 15 79925838 79956593 - Fam227a protein_coding retained_intron MGP_129S1SvImJ_T0042834.1 MGP_129S1SvImJ_G0022426.1 mouse_genomes_project 15 105190010 105193292 + MGP_129S1SvImJ_P0042834 Hoxc11 protein_coding protein_coding MGP_129S1SvImJ_T0042555.1 MGP_129S1SvImJ_G0022336.1 mouse_genomes_project 15 101461837 101465818 + MGP_129S1SvImJ_P0042555 Aqp6 protein_coding protein_coding MGP_129S1SvImJ_T0042282.1 MGP_129S1SvImJ_G0022244.1 mouse_genomes_project 15 91747391 91944689 - MGP_129S1SvImJ_P0042282 Cpne8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042283.1 MGP_129S1SvImJ_G0022244.1 mouse_genomes_project 15 91747392 91944750 - MGP_129S1SvImJ_P0042283 Cpne8 protein_coding protein_coding MGP_129S1SvImJ_T0042284.1 MGP_129S1SvImJ_G0022244.1 mouse_genomes_project 15 91904323 91944583 - MGP_129S1SvImJ_P0042284 Cpne8 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042285.1 MGP_129S1SvImJ_G0022244.1 mouse_genomes_project 15 91908921 91944694 - Cpne8 protein_coding retained_intron MGP_129S1SvImJ_T0099461.1 MGP_129S1SvImJ_G0037528.1 mouse_genomes_project 15 65185749 65185938 + Gm23907 snRNA snRNA MGP_129S1SvImJ_T0042102.1 MGP_129S1SvImJ_G0022195.1 mouse_genomes_project 15 86717175 86721866 - MGP_129S1SvImJ_P0042102 Cdpf1 protein_coding protein_coding MGP_129S1SvImJ_T0042103.1 MGP_129S1SvImJ_G0022195.1 mouse_genomes_project 15 86717403 86721824 - MGP_129S1SvImJ_P0042103 Cdpf1 protein_coding protein_coding MGP_129S1SvImJ_T0042104.1 MGP_129S1SvImJ_G0022195.1 mouse_genomes_project 15 86717447 86721814 - MGP_129S1SvImJ_P0042104 Cdpf1 protein_coding protein_coding MGP_129S1SvImJ_T0042105.1 MGP_129S1SvImJ_G0022195.1 mouse_genomes_project 15 86717450 86721260 - MGP_129S1SvImJ_P0042105 Cdpf1 protein_coding protein_coding MGP_129S1SvImJ_T0042106.1 MGP_129S1SvImJ_G0022195.1 mouse_genomes_project 15 86717460 86721867 - MGP_129S1SvImJ_P0042106 Cdpf1 protein_coding protein_coding MGP_129S1SvImJ_T0042107.1 MGP_129S1SvImJ_G0022195.1 mouse_genomes_project 15 86718447 86721829 - MGP_129S1SvImJ_P0042107 Cdpf1 protein_coding protein_coding MGP_129S1SvImJ_T0013096.1 MGP_129S1SvImJ_G0011185.1 mouse_genomes_project 15 46427574 46430762 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010099.1 MGP_129S1SvImJ_G0008215.1 mouse_genomes_project 15 86603540 86603635 + Mirlet7c-2 miRNA miRNA MGP_129S1SvImJ_T0042614.1 MGP_129S1SvImJ_G0022351.1 mouse_genomes_project 15 102379417 102384735 + MGP_129S1SvImJ_P0042614 Gm5475 protein_coding protein_coding MGP_129S1SvImJ_T0042615.1 MGP_129S1SvImJ_G0022351.1 mouse_genomes_project 15 102380463 102385410 + MGP_129S1SvImJ_P0042615 Gm5475 protein_coding protein_coding MGP_129S1SvImJ_T0042299.1 MGP_129S1SvImJ_G0022249.1 mouse_genomes_project 15 92994216 93150786 + MGP_129S1SvImJ_P0042299 Lrrk2 protein_coding protein_coding MGP_129S1SvImJ_T0042300.1 MGP_129S1SvImJ_G0022249.1 mouse_genomes_project 15 92994322 93150277 + MGP_129S1SvImJ_P0042300 Lrrk2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042301.1 MGP_129S1SvImJ_G0022249.1 mouse_genomes_project 15 93063023 93121724 + Lrrk2 protein_coding processed_transcript MGP_129S1SvImJ_T0042302.1 MGP_129S1SvImJ_G0022249.1 mouse_genomes_project 15 93103818 93109964 + Lrrk2 protein_coding processed_transcript MGP_129S1SvImJ_T0042303.1 MGP_129S1SvImJ_G0022249.1 mouse_genomes_project 15 93111850 93150692 + Lrrk2 protein_coding processed_transcript MGP_129S1SvImJ_T0042304.1 MGP_129S1SvImJ_G0022249.1 mouse_genomes_project 15 93143012 93150692 + Lrrk2 protein_coding retained_intron MGP_129S1SvImJ_T0042305.1 MGP_129S1SvImJ_G0022249.1 mouse_genomes_project 15 93149371 93150785 + Lrrk2 protein_coding retained_intron MGP_129S1SvImJ_T0041259.1 MGP_129S1SvImJ_G0021953.1 mouse_genomes_project 15 75567620 75582972 - MGP_129S1SvImJ_P0041259 Ly6h protein_coding protein_coding MGP_129S1SvImJ_T0041260.1 MGP_129S1SvImJ_G0021953.1 mouse_genomes_project 15 75569366 75582972 - MGP_129S1SvImJ_P0041260 Ly6h protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041261.1 MGP_129S1SvImJ_G0021953.1 mouse_genomes_project 15 75581065 75583579 - MGP_129S1SvImJ_P0041261 Ly6h protein_coding protein_coding MGP_129S1SvImJ_T0041262.1 MGP_129S1SvImJ_G0021953.1 mouse_genomes_project 15 75581066 75583180 - MGP_129S1SvImJ_P0041262 Ly6h protein_coding protein_coding MGP_129S1SvImJ_T0041263.1 MGP_129S1SvImJ_G0021953.1 mouse_genomes_project 15 75581068 75582981 - MGP_129S1SvImJ_P0041263 Ly6h protein_coding protein_coding MGP_129S1SvImJ_T0041264.1 MGP_129S1SvImJ_G0021953.1 mouse_genomes_project 15 75581347 75583540 - MGP_129S1SvImJ_P0041264 Ly6h protein_coding protein_coding MGP_129S1SvImJ_T0041265.1 MGP_129S1SvImJ_G0021953.1 mouse_genomes_project 15 75581534 75582956 - Ly6h protein_coding retained_intron MGP_129S1SvImJ_T0040801.1 MGP_129S1SvImJ_G0021795.1 mouse_genomes_project 15 34890143 34939441 - MGP_129S1SvImJ_P0040801 Snx31 protein_coding protein_coding MGP_129S1SvImJ_T0040802.1 MGP_129S1SvImJ_G0021795.1 mouse_genomes_project 15 34890493 34939436 - MGP_129S1SvImJ_P0040802 Snx31 protein_coding protein_coding MGP_129S1SvImJ_T0040803.1 MGP_129S1SvImJ_G0021795.1 mouse_genomes_project 15 34922929 34930023 - Snx31 protein_coding processed_transcript MGP_129S1SvImJ_T0040804.1 MGP_129S1SvImJ_G0021795.1 mouse_genomes_project 15 34922929 34930522 - MGP_129S1SvImJ_P0040804 Snx31 protein_coding protein_coding MGP_129S1SvImJ_T0040567.1 MGP_129S1SvImJ_G0021713.1 mouse_genomes_project 15 6367835 6404278 + Ugt3a1 protein_coding processed_transcript MGP_129S1SvImJ_T0040568.1 MGP_129S1SvImJ_G0021713.1 mouse_genomes_project 15 6376157 6408797 + MGP_129S1SvImJ_P0040568 Ugt3a1 protein_coding protein_coding MGP_129S1SvImJ_T0040569.1 MGP_129S1SvImJ_G0021713.1 mouse_genomes_project 15 6376176 6399974 + Ugt3a1 protein_coding processed_transcript MGP_129S1SvImJ_T0040570.1 MGP_129S1SvImJ_G0021713.1 mouse_genomes_project 15 6376178 6399896 + Ugt3a1 protein_coding processed_transcript MGP_129S1SvImJ_T0040571.1 MGP_129S1SvImJ_G0021713.1 mouse_genomes_project 15 6379838 6388368 + MGP_129S1SvImJ_P0040571 Ugt3a1 protein_coding protein_coding MGP_129S1SvImJ_T0041393.1 MGP_129S1SvImJ_G0021985.1 mouse_genomes_project 15 76414664 76417076 + MGP_129S1SvImJ_P0041393 Cyc1 protein_coding protein_coding MGP_129S1SvImJ_T0040542.1 MGP_129S1SvImJ_G0021708.1 mouse_genomes_project 15 5730407 5814873 - MGP_129S1SvImJ_P0040542 Slc1a3 protein_coding protein_coding MGP_129S1SvImJ_T0040543.1 MGP_129S1SvImJ_G0021708.1 mouse_genomes_project 15 5731010 5748574 - Slc1a3 protein_coding retained_intron MGP_129S1SvImJ_T0040544.1 MGP_129S1SvImJ_G0021708.1 mouse_genomes_project 15 5738540 5739533 - Slc1a3 protein_coding retained_intron MGP_129S1SvImJ_T0040545.1 MGP_129S1SvImJ_G0021708.1 mouse_genomes_project 15 5782291 5814525 - Slc1a3 protein_coding processed_transcript MGP_129S1SvImJ_T0040546.1 MGP_129S1SvImJ_G0021708.1 mouse_genomes_project 15 5787767 5814518 - MGP_129S1SvImJ_P0040546 Slc1a3 protein_coding protein_coding MGP_129S1SvImJ_T0040547.1 MGP_129S1SvImJ_G0021708.1 mouse_genomes_project 15 5789649 5814605 - Slc1a3 protein_coding retained_intron MGP_129S1SvImJ_T0040548.1 MGP_129S1SvImJ_G0021708.1 mouse_genomes_project 15 5811718 5814590 - Slc1a3 protein_coding retained_intron MGP_129S1SvImJ_T0040549.1 MGP_129S1SvImJ_G0021708.1 mouse_genomes_project 15 5812851 5813697 - Slc1a3 protein_coding processed_transcript MGP_129S1SvImJ_T0099445.1 MGP_129S1SvImJ_G0037512.1 mouse_genomes_project 15 34583956 34584013 + Gm23754 snRNA snRNA MGP_129S1SvImJ_T0042583.1 MGP_129S1SvImJ_G0022344.1 mouse_genomes_project 15 101662935 101733728 - MGP_129S1SvImJ_P0042583 Lima1 protein_coding protein_coding MGP_129S1SvImJ_T0042584.1 MGP_129S1SvImJ_G0022344.1 mouse_genomes_project 15 101665712 101669649 - Lima1 protein_coding retained_intron MGP_129S1SvImJ_T0042585.1 MGP_129S1SvImJ_G0022344.1 mouse_genomes_project 15 101731141 101766691 - Lima1 protein_coding retained_intron MGP_129S1SvImJ_T0098507.1 MGP_129S1SvImJ_G0036592.1 mouse_genomes_project 15 31897413 31897544 - Gm24476 rRNA rRNA MGP_129S1SvImJ_T0041340.1 MGP_129S1SvImJ_G0021977.1 mouse_genomes_project 15 76230134 76260693 - MGP_129S1SvImJ_P0041340 Plec protein_coding protein_coding MGP_129S1SvImJ_T0041341.1 MGP_129S1SvImJ_G0021977.1 mouse_genomes_project 15 76230139 76267354 - MGP_129S1SvImJ_P0041341 Plec protein_coding protein_coding MGP_129S1SvImJ_T0041342.1 MGP_129S1SvImJ_G0021977.1 mouse_genomes_project 15 76230139 76260868 - MGP_129S1SvImJ_P0041342 Plec protein_coding protein_coding MGP_129S1SvImJ_T0041343.1 MGP_129S1SvImJ_G0021977.1 mouse_genomes_project 15 76230139 76294902 - MGP_129S1SvImJ_P0041343 Plec protein_coding protein_coding MGP_129S1SvImJ_T0041344.1 MGP_129S1SvImJ_G0021977.1 mouse_genomes_project 15 76230139 76270198 - MGP_129S1SvImJ_P0041344 Plec protein_coding protein_coding MGP_129S1SvImJ_T0041345.1 MGP_129S1SvImJ_G0021977.1 mouse_genomes_project 15 76230139 76269286 - MGP_129S1SvImJ_P0041345 Plec protein_coding protein_coding MGP_129S1SvImJ_T0041346.1 MGP_129S1SvImJ_G0021977.1 mouse_genomes_project 15 76230140 76293021 - MGP_129S1SvImJ_P0041346 Plec protein_coding protein_coding MGP_129S1SvImJ_T0041347.1 MGP_129S1SvImJ_G0021977.1 mouse_genomes_project 15 76230141 76261640 - MGP_129S1SvImJ_P0041347 Plec protein_coding protein_coding MGP_129S1SvImJ_T0041348.1 MGP_129S1SvImJ_G0021977.1 mouse_genomes_project 15 76230141 76256743 - MGP_129S1SvImJ_P0041348 Plec protein_coding protein_coding MGP_129S1SvImJ_T0041349.1 MGP_129S1SvImJ_G0021977.1 mouse_genomes_project 15 76230141 76267355 - MGP_129S1SvImJ_P0041349 Plec protein_coding protein_coding MGP_129S1SvImJ_T0041350.1 MGP_129S1SvImJ_G0021977.1 mouse_genomes_project 15 76230141 76259242 - MGP_129S1SvImJ_P0041350 Plec protein_coding protein_coding MGP_129S1SvImJ_T0041351.1 MGP_129S1SvImJ_G0021977.1 mouse_genomes_project 15 76234545 76249076 - MGP_129S1SvImJ_P0041351 Plec protein_coding protein_coding MGP_129S1SvImJ_T0041352.1 MGP_129S1SvImJ_G0021977.1 mouse_genomes_project 15 76247643 76267354 - MGP_129S1SvImJ_P0041352 Plec protein_coding protein_coding MGP_129S1SvImJ_T0041353.1 MGP_129S1SvImJ_G0021977.1 mouse_genomes_project 15 76249496 76260868 - MGP_129S1SvImJ_P0041353 Plec protein_coding protein_coding MGP_129S1SvImJ_T0041354.1 MGP_129S1SvImJ_G0021977.1 mouse_genomes_project 15 76249496 76295569 - MGP_129S1SvImJ_P0041354 Plec protein_coding protein_coding MGP_129S1SvImJ_T0041355.1 MGP_129S1SvImJ_G0021977.1 mouse_genomes_project 15 76249496 76269286 - MGP_129S1SvImJ_P0041355 Plec protein_coding protein_coding MGP_129S1SvImJ_T0041356.1 MGP_129S1SvImJ_G0021977.1 mouse_genomes_project 15 76249573 76296094 - MGP_129S1SvImJ_P0041356 Plec protein_coding protein_coding MGP_129S1SvImJ_T0041357.1 MGP_129S1SvImJ_G0021977.1 mouse_genomes_project 15 76255425 76270198 - MGP_129S1SvImJ_P0041357 Plec protein_coding protein_coding MGP_129S1SvImJ_T0041358.1 MGP_129S1SvImJ_G0021977.1 mouse_genomes_project 15 76255425 76261640 - MGP_129S1SvImJ_P0041358 Plec protein_coding protein_coding MGP_129S1SvImJ_T0041359.1 MGP_129S1SvImJ_G0021977.1 mouse_genomes_project 15 76294258 76296098 - Plec protein_coding retained_intron MGP_129S1SvImJ_T0102255.1 MGP_129S1SvImJ_G0040089.1 mouse_genomes_project 15 75080036 75083796 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0041161.1 MGP_129S1SvImJ_G0021919.1 mouse_genomes_project 15 72801277 72893857 - MGP_129S1SvImJ_P0041161 Ago2 protein_coding protein_coding MGP_129S1SvImJ_T0041042.1 MGP_129S1SvImJ_G0021887.1 mouse_genomes_project 15 60004024 60007539 + MGP_129S1SvImJ_P0041042 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0042409.1 MGP_129S1SvImJ_G0022283.1 mouse_genomes_project 15 99661845 99692566 - MGP_129S1SvImJ_P0042409 Col2a1 protein_coding protein_coding MGP_129S1SvImJ_T0042410.1 MGP_129S1SvImJ_G0022283.1 mouse_genomes_project 15 99661845 99692528 - MGP_129S1SvImJ_P0042410 Col2a1 protein_coding protein_coding MGP_129S1SvImJ_T0042411.1 MGP_129S1SvImJ_G0022283.1 mouse_genomes_project 15 99672567 99675202 - Col2a1 protein_coding retained_intron MGP_129S1SvImJ_T0042412.1 MGP_129S1SvImJ_G0022283.1 mouse_genomes_project 15 99674391 99676728 - Col2a1 protein_coding processed_transcript MGP_129S1SvImJ_T0042413.1 MGP_129S1SvImJ_G0022283.1 mouse_genomes_project 15 99682752 99687341 - Col2a1 protein_coding retained_intron MGP_129S1SvImJ_T0042414.1 MGP_129S1SvImJ_G0022283.1 mouse_genomes_project 15 99682903 99687569 - Col2a1 protein_coding processed_transcript MGP_129S1SvImJ_T0042415.1 MGP_129S1SvImJ_G0022283.1 mouse_genomes_project 15 99686256 99689765 - Col2a1 protein_coding processed_transcript MGP_129S1SvImJ_T0042416.1 MGP_129S1SvImJ_G0022283.1 mouse_genomes_project 15 99686463 99692506 - MGP_129S1SvImJ_P0042416 Col2a1 protein_coding protein_coding MGP_129S1SvImJ_T0042417.1 MGP_129S1SvImJ_G0022283.1 mouse_genomes_project 15 99688118 99692528 - Col2a1 protein_coding retained_intron MGP_129S1SvImJ_T0006764.1 MGP_129S1SvImJ_G0005590.1 mouse_genomes_project 15 36752806 36756300 - lincRNA lincRNA MGP_129S1SvImJ_T0042499.1 MGP_129S1SvImJ_G0022317.1 mouse_genomes_project 15 100675758 100691761 - MGP_129S1SvImJ_P0042499 Lmbr1l protein_coding protein_coding MGP_129S1SvImJ_T0042500.1 MGP_129S1SvImJ_G0022317.1 mouse_genomes_project 15 100678008 100681571 - Lmbr1l protein_coding processed_transcript MGP_129S1SvImJ_T0042501.1 MGP_129S1SvImJ_G0022317.1 mouse_genomes_project 15 100679815 100681897 - Lmbr1l protein_coding retained_intron MGP_129S1SvImJ_T0042502.1 MGP_129S1SvImJ_G0022317.1 mouse_genomes_project 15 100680513 100682094 - Lmbr1l protein_coding retained_intron MGP_129S1SvImJ_T0042503.1 MGP_129S1SvImJ_G0022317.1 mouse_genomes_project 15 100686135 100691638 - Lmbr1l protein_coding processed_transcript MGP_129S1SvImJ_T0042504.1 MGP_129S1SvImJ_G0022317.1 mouse_genomes_project 15 100687809 100691333 - Lmbr1l protein_coding processed_transcript MGP_129S1SvImJ_T0042432.1 MGP_129S1SvImJ_G0022287.1 mouse_genomes_project 15 99862474 99864802 + MGP_129S1SvImJ_P0042432 Ccdc184 protein_coding protein_coding MGP_129S1SvImJ_T0040999.1 MGP_129S1SvImJ_G0021865.1 mouse_genomes_project 15 57177134 57189191 - MGP_129S1SvImJ_P0040999 9130401M01Rik protein_coding protein_coding MGP_129S1SvImJ_T0041000.1 MGP_129S1SvImJ_G0021865.1 mouse_genomes_project 15 57177145 57182771 - 9130401M01Rik protein_coding processed_transcript MGP_129S1SvImJ_T0041002.1 MGP_129S1SvImJ_G0021865.1 mouse_genomes_project 15 57183687 57189066 - MGP_129S1SvImJ_P0041002 9130401M01Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041003.1 MGP_129S1SvImJ_G0021865.1 mouse_genomes_project 15 57185831 57189201 - MGP_129S1SvImJ_P0041003 9130401M01Rik protein_coding protein_coding MGP_129S1SvImJ_T0040676.1 MGP_129S1SvImJ_G0021745.1 mouse_genomes_project 15 18857899 19349510 + MGP_129S1SvImJ_P0040676 Cdh12 protein_coding protein_coding MGP_129S1SvImJ_T0003663.1 MGP_129S1SvImJ_G0003315.1 mouse_genomes_project 15 102571656 102573491 + Gm27209 antisense antisense MGP_129S1SvImJ_T0041223.1 MGP_129S1SvImJ_G0021939.1 mouse_genomes_project 15 74582915 74586641 - MGP_129S1SvImJ_P0041223 Ly6k protein_coding protein_coding MGP_129S1SvImJ_T0041224.1 MGP_129S1SvImJ_G0021939.1 mouse_genomes_project 15 74582915 74586188 - MGP_129S1SvImJ_P0041224 Ly6k protein_coding protein_coding MGP_129S1SvImJ_T0011421.1 MGP_129S1SvImJ_G0009537.1 mouse_genomes_project 15 105183169 105183267 + Gm27443 misc_RNA misc_RNA MGP_129S1SvImJ_T0010114.1 MGP_129S1SvImJ_G0008230.1 mouse_genomes_project 15 103834346 103834475 + Gm44323 miRNA miRNA MGP_129S1SvImJ_T0040716.1 MGP_129S1SvImJ_G0021762.1 mouse_genomes_project 15 29427724 29479200 + MGP_129S1SvImJ_P0040716 Dap protein_coding protein_coding MGP_129S1SvImJ_T0040717.1 MGP_129S1SvImJ_G0021762.1 mouse_genomes_project 15 29427798 29480222 + MGP_129S1SvImJ_P0040717 Dap protein_coding protein_coding MGP_129S1SvImJ_T0040718.1 MGP_129S1SvImJ_G0021762.1 mouse_genomes_project 15 29427829 29479340 + MGP_129S1SvImJ_P0040718 Dap protein_coding protein_coding MGP_129S1SvImJ_T0040719.1 MGP_129S1SvImJ_G0021762.1 mouse_genomes_project 15 29474247 29479265 + MGP_129S1SvImJ_P0040719 Dap protein_coding protein_coding MGP_129S1SvImJ_T0041999.1 MGP_129S1SvImJ_G0022159.1 mouse_genomes_project 15 83789504 83815553 - MGP_129S1SvImJ_P0041999 Poldip3 protein_coding protein_coding MGP_129S1SvImJ_T0042000.1 MGP_129S1SvImJ_G0022159.1 mouse_genomes_project 15 83789504 83815606 - MGP_129S1SvImJ_P0042000 Poldip3 protein_coding protein_coding MGP_129S1SvImJ_T0042001.1 MGP_129S1SvImJ_G0022159.1 mouse_genomes_project 15 83796642 83815523 - MGP_129S1SvImJ_P0042001 Poldip3 protein_coding protein_coding MGP_129S1SvImJ_T0042002.1 MGP_129S1SvImJ_G0022159.1 mouse_genomes_project 15 83796737 83799384 - Poldip3 protein_coding retained_intron MGP_129S1SvImJ_T0042003.1 MGP_129S1SvImJ_G0022159.1 mouse_genomes_project 15 83799160 83815551 - Poldip3 protein_coding retained_intron MGP_129S1SvImJ_T0042004.1 MGP_129S1SvImJ_G0022159.1 mouse_genomes_project 15 83801300 83815558 - Poldip3 protein_coding retained_intron MGP_129S1SvImJ_T0013088.1 MGP_129S1SvImJ_G0011177.1 mouse_genomes_project 15 35870231 35871679 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0040800.1 MGP_129S1SvImJ_G0021794.1 mouse_genomes_project 15 34866486 34882885 - MGP_129S1SvImJ_P0040800 Ankrd46 protein_coding protein_coding MGP_129S1SvImJ_T0100741.1 MGP_129S1SvImJ_G0038808.1 mouse_genomes_project 15 42975380 42975512 + Gm25093 snoRNA snoRNA MGP_129S1SvImJ_T0041210.1 MGP_129S1SvImJ_G0021931.1 mouse_genomes_project 15 74497301 74499522 + MGP_129S1SvImJ_P0041210 Psca protein_coding protein_coding MGP_129S1SvImJ_T0041772.1 MGP_129S1SvImJ_G0022090.1 mouse_genomes_project 15 80214711 80231260 - MGP_129S1SvImJ_P0041772 Cbx7 protein_coding protein_coding MGP_129S1SvImJ_T0041773.1 MGP_129S1SvImJ_G0022090.1 mouse_genomes_project 15 80214725 80231383 - MGP_129S1SvImJ_P0041773 Cbx7 protein_coding protein_coding MGP_129S1SvImJ_T0041774.1 MGP_129S1SvImJ_G0022090.1 mouse_genomes_project 15 80214728 80231512 - Cbx7 protein_coding retained_intron MGP_129S1SvImJ_T0041775.1 MGP_129S1SvImJ_G0022090.1 mouse_genomes_project 15 80217112 80232628 - MGP_129S1SvImJ_P0041775 Cbx7 protein_coding protein_coding MGP_129S1SvImJ_T0041776.1 MGP_129S1SvImJ_G0022090.1 mouse_genomes_project 15 80217382 80274491 - MGP_129S1SvImJ_P0041776 Cbx7 protein_coding protein_coding MGP_129S1SvImJ_T0041777.1 MGP_129S1SvImJ_G0022090.1 mouse_genomes_project 15 80217885 80231260 - MGP_129S1SvImJ_P0041777 Cbx7 protein_coding protein_coding MGP_129S1SvImJ_T0041778.1 MGP_129S1SvImJ_G0022090.1 mouse_genomes_project 15 80229342 80232559 - Cbx7 protein_coding retained_intron MGP_129S1SvImJ_T0011423.1 MGP_129S1SvImJ_G0009539.1 mouse_genomes_project 15 105185449 105185606 + Gm27535 misc_RNA misc_RNA MGP_129S1SvImJ_T0041438.1 MGP_129S1SvImJ_G0021992.1 mouse_genomes_project 15 76527733 76551995 - MGP_129S1SvImJ_P0041438 Bop1 protein_coding protein_coding MGP_129S1SvImJ_T0006778.1 MGP_129S1SvImJ_G0005601.1 mouse_genomes_project 15 54016857 54028475 + Gm26684 lincRNA lincRNA MGP_129S1SvImJ_T0041910.1 MGP_129S1SvImJ_G0022127.1 mouse_genomes_project 15 82425619 82435444 - MGP_129S1SvImJ_P0041910 Pmm1 protein_coding protein_coding MGP_129S1SvImJ_T0041911.1 MGP_129S1SvImJ_G0022127.1 mouse_genomes_project 15 82425619 82435383 - MGP_129S1SvImJ_P0041911 Pmm1 protein_coding protein_coding MGP_129S1SvImJ_T0041912.1 MGP_129S1SvImJ_G0022127.1 mouse_genomes_project 15 82425913 82428016 - Pmm1 protein_coding retained_intron MGP_129S1SvImJ_T0041913.1 MGP_129S1SvImJ_G0022127.1 mouse_genomes_project 15 82425955 82435356 - MGP_129S1SvImJ_P0041913 Pmm1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041914.1 MGP_129S1SvImJ_G0022127.1 mouse_genomes_project 15 82426058 82426776 - Pmm1 protein_coding retained_intron MGP_129S1SvImJ_T0041915.1 MGP_129S1SvImJ_G0022127.1 mouse_genomes_project 15 82430066 82435347 - Pmm1 protein_coding retained_intron MGP_129S1SvImJ_T0041916.1 MGP_129S1SvImJ_G0022127.1 mouse_genomes_project 15 82431854 82435278 - Pmm1 protein_coding retained_intron MGP_129S1SvImJ_T0100729.1 MGP_129S1SvImJ_G0038796.1 mouse_genomes_project 15 28196230 28196303 - Gm24554 snoRNA snoRNA MGP_129S1SvImJ_T0010082.1 MGP_129S1SvImJ_G0008198.1 mouse_genomes_project 15 81329721 81329803 + Mir5113 miRNA miRNA MGP_129S1SvImJ_T0040600.1 MGP_129S1SvImJ_G0021721.1 mouse_genomes_project 15 7580850 7607041 - MGP_129S1SvImJ_P0040600 Dnajc21 protein_coding protein_coding MGP_129S1SvImJ_T0040601.1 MGP_129S1SvImJ_G0021721.1 mouse_genomes_project 15 7580859 7598176 - MGP_129S1SvImJ_P0040601 Dnajc21 protein_coding protein_coding MGP_129S1SvImJ_T0040602.1 MGP_129S1SvImJ_G0021721.1 mouse_genomes_project 15 7580860 7584087 - Dnajc21 protein_coding retained_intron MGP_129S1SvImJ_T0040603.1 MGP_129S1SvImJ_G0021721.1 mouse_genomes_project 15 7581790 7586009 - Dnajc21 protein_coding retained_intron MGP_129S1SvImJ_T0040604.1 MGP_129S1SvImJ_G0021721.1 mouse_genomes_project 15 7588390 7598697 - Dnajc21 protein_coding retained_intron MGP_129S1SvImJ_T0042572.1 MGP_129S1SvImJ_G0022340.1 mouse_genomes_project 15 101573638 101590834 + MGP_129S1SvImJ_P0042572 Smarcd1 protein_coding protein_coding MGP_129S1SvImJ_T0101855.1 MGP_129S1SvImJ_G0039798.1 mouse_genomes_project 15 63257924 63260277 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101856.1 MGP_129S1SvImJ_G0039798.1 mouse_genomes_project 15 63257938 63260157 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101857.1 MGP_129S1SvImJ_G0039798.1 mouse_genomes_project 15 63258946 63264416 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0041895.1 MGP_129S1SvImJ_G0022121.1 mouse_genomes_project 15 82312409 82312766 - MGP_129S1SvImJ_P0041895 Gm8444 protein_coding protein_coding MGP_129S1SvImJ_T0041043.1 MGP_129S1SvImJ_G0021888.1 mouse_genomes_project 15 60075487 60081574 - MGP_129S1SvImJ_P0041043 Fam84b protein_coding protein_coding MGP_129S1SvImJ_T0041044.1 MGP_129S1SvImJ_G0021888.1 mouse_genomes_project 15 60081525 60111097 - Fam84b protein_coding processed_transcript MGP_129S1SvImJ_T0099463.1 MGP_129S1SvImJ_G0037530.1 mouse_genomes_project 15 72174128 72174190 - Gm24390 snRNA snRNA MGP_129S1SvImJ_T0042132.1 MGP_129S1SvImJ_G0022203.1 mouse_genomes_project 15 87176586 87470792 + MGP_129S1SvImJ_P0042132 Tbc1d22a protein_coding protein_coding MGP_129S1SvImJ_T0040776.1 MGP_129S1SvImJ_G0021783.1 mouse_genomes_project 15 32892362 33020543 - MGP_129S1SvImJ_P0040776 Nipal2 protein_coding protein_coding MGP_129S1SvImJ_T0000957.1 MGP_129S1SvImJ_G0000889.1 mouse_genomes_project 15 4697228 4697604 - TEC TEC MGP_129S1SvImJ_T0040712.1 MGP_129S1SvImJ_G0021758.1 mouse_genomes_project 15 25803974 26102651 - MGP_129S1SvImJ_P0040712 Trio protein_coding protein_coding MGP_129S1SvImJ_T0041026.1 MGP_129S1SvImJ_G0021878.1 mouse_genomes_project 15 58096471 58109641 + MGP_129S1SvImJ_P0041026 Rnf139 protein_coding protein_coding MGP_129S1SvImJ_T0042488.1 MGP_129S1SvImJ_G0022312.1 mouse_genomes_project 15 100564638 100568821 - MGP_129S1SvImJ_P0042488 Ddn protein_coding protein_coding MGP_129S1SvImJ_T0041523.1 MGP_129S1SvImJ_G0022014.1 mouse_genomes_project 15 76998534 77009463 + MGP_129S1SvImJ_P0041523 Zfp7 protein_coding protein_coding MGP_129S1SvImJ_T0006797.1 MGP_129S1SvImJ_G0005611.1 mouse_genomes_project 15 83627950 83635021 - Gm29019 lincRNA lincRNA MGP_129S1SvImJ_T0006798.1 MGP_129S1SvImJ_G0005611.1 mouse_genomes_project 15 83628008 83634902 - Gm29019 lincRNA lincRNA MGP_129S1SvImJ_T0006761.1 MGP_129S1SvImJ_G0005587.1 mouse_genomes_project 15 30542217 30546306 - Snhg18 lincRNA lincRNA MGP_129S1SvImJ_T0041631.1 MGP_129S1SvImJ_G0022057.1 mouse_genomes_project 15 79166781 79170177 + MGP_129S1SvImJ_P0041631 Lgals1 protein_coding protein_coding MGP_129S1SvImJ_T0041085.1 MGP_129S1SvImJ_G0021899.1 mouse_genomes_project 15 64478627 64519119 - MGP_129S1SvImJ_P0041085 Gm21961 protein_coding protein_coding MGP_129S1SvImJ_T0101859.1 MGP_129S1SvImJ_G0039800.1 mouse_genomes_project 15 63295080 63299161 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0042452.1 MGP_129S1SvImJ_G0022298.1 mouse_genomes_project 15 100205712 100207983 - MGP_129S1SvImJ_P0042452 Lalba protein_coding protein_coding MGP_129S1SvImJ_T0003616.1 MGP_129S1SvImJ_G0003278.1 mouse_genomes_project 15 3256908 3263578 - Gm16311 antisense antisense MGP_129S1SvImJ_T0006806.1 MGP_129S1SvImJ_G0005616.1 mouse_genomes_project 15 90390592 90394015 - Gm26798 lincRNA lincRNA MGP_129S1SvImJ_T0041793.1 MGP_129S1SvImJ_G0022097.1 mouse_genomes_project 15 80590832 80593189 + MGP_129S1SvImJ_P0041793 Atf4 protein_coding protein_coding MGP_129S1SvImJ_T0041284.1 MGP_129S1SvImJ_G0021960.1 mouse_genomes_project 15 75903464 75909624 + MGP_129S1SvImJ_P0041284 Gsdmd protein_coding protein_coding MGP_129S1SvImJ_T0041014.1 MGP_129S1SvImJ_G0021869.1 mouse_genomes_project 15 57302775 57320839 + MGP_129S1SvImJ_P0041014 Wdyhv1 protein_coding protein_coding MGP_129S1SvImJ_T0041645.1 MGP_129S1SvImJ_G0022060.1 mouse_genomes_project 15 79283138 79285425 + MGP_129S1SvImJ_P0041645 H1f0 protein_coding protein_coding MGP_129S1SvImJ_T0041249.1 MGP_129S1SvImJ_G0021946.1 mouse_genomes_project 15 74807020 74808947 - MGP_129S1SvImJ_P0041249 protein_coding protein_coding MGP_129S1SvImJ_T0099456.1 MGP_129S1SvImJ_G0037523.1 mouse_genomes_project 15 57304547 57304609 - Gm23475 snRNA snRNA MGP_129S1SvImJ_T0041020.1 MGP_129S1SvImJ_G0021874.1 mouse_genomes_project 15 57700189 57860239 + MGP_129S1SvImJ_P0041020 Fer1l6 protein_coding protein_coding MGP_129S1SvImJ_T0041021.1 MGP_129S1SvImJ_G0021874.1 mouse_genomes_project 15 57835326 57843903 + Fer1l6 protein_coding processed_transcript MGP_129S1SvImJ_T0041022.1 MGP_129S1SvImJ_G0021874.1 mouse_genomes_project 15 57845146 57862398 + Fer1l6 protein_coding retained_intron MGP_129S1SvImJ_T0040852.1 MGP_129S1SvImJ_G0021807.1 mouse_genomes_project 15 36814256 36820537 - MGP_129S1SvImJ_P0040852 Klf10 protein_coding protein_coding MGP_129S1SvImJ_T0042088.1 MGP_129S1SvImJ_G0022189.1 mouse_genomes_project 15 85969363 85981847 + MGP_129S1SvImJ_P0042088 Ribc2 protein_coding protein_coding MGP_129S1SvImJ_T0010094.1 MGP_129S1SvImJ_G0008210.1 mouse_genomes_project 15 83408096 83408156 - Gm27618 miRNA miRNA MGP_129S1SvImJ_T0040795.1 MGP_129S1SvImJ_G0021791.1 mouse_genomes_project 15 34552301 34555262 + MGP_129S1SvImJ_P0040795 Polr2k protein_coding protein_coding MGP_129S1SvImJ_T0040796.1 MGP_129S1SvImJ_G0021791.1 mouse_genomes_project 15 34552324 34555265 + MGP_129S1SvImJ_P0040796 Polr2k protein_coding protein_coding MGP_129S1SvImJ_T0041704.1 MGP_129S1SvImJ_G0022072.1 mouse_genomes_project 15 79607215 79620671 + MGP_129S1SvImJ_P0041704 Maff protein_coding protein_coding MGP_129S1SvImJ_T0041705.1 MGP_129S1SvImJ_G0022072.1 mouse_genomes_project 15 79607735 79620671 + MGP_129S1SvImJ_P0041705 Maff protein_coding protein_coding MGP_129S1SvImJ_T0042784.1 MGP_129S1SvImJ_G0022415.1 mouse_genomes_project 15 104657585 104689789 + MGP_129S1SvImJ_P0042784 Pcbp2 protein_coding protein_coding MGP_129S1SvImJ_T0042785.1 MGP_129S1SvImJ_G0022415.1 mouse_genomes_project 15 104657585 104689789 + MGP_129S1SvImJ_P0042785 Pcbp2 protein_coding protein_coding MGP_129S1SvImJ_T0042786.1 MGP_129S1SvImJ_G0022415.1 mouse_genomes_project 15 104657585 104689789 + MGP_129S1SvImJ_P0042786 Pcbp2 protein_coding protein_coding MGP_129S1SvImJ_T0042721.1 MGP_129S1SvImJ_G0022397.1 mouse_genomes_project 15 104213989 104237260 + MGP_129S1SvImJ_P0042721 Eif4b protein_coding protein_coding MGP_129S1SvImJ_T0041969.1 MGP_129S1SvImJ_G0022153.1 mouse_genomes_project 15 83298719 83300085 - MGP_129S1SvImJ_P0041969 Cyp2d37-ps protein_coding protein_coding MGP_129S1SvImJ_T0042269.1 MGP_129S1SvImJ_G0022241.1 mouse_genomes_project 15 90793449 90804702 - MGP_129S1SvImJ_P0042269 Rabl2 protein_coding protein_coding MGP_129S1SvImJ_T0042270.1 MGP_129S1SvImJ_G0022241.1 mouse_genomes_project 15 90793453 90804644 - Rabl2 protein_coding retained_intron MGP_129S1SvImJ_T0042271.1 MGP_129S1SvImJ_G0022241.1 mouse_genomes_project 15 90793453 90804643 - MGP_129S1SvImJ_P0042271 Rabl2 protein_coding protein_coding MGP_129S1SvImJ_T0042272.1 MGP_129S1SvImJ_G0022241.1 mouse_genomes_project 15 90793961 90803181 - MGP_129S1SvImJ_P0042272 Rabl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042273.1 MGP_129S1SvImJ_G0022241.1 mouse_genomes_project 15 90794231 90795471 - Rabl2 protein_coding retained_intron MGP_129S1SvImJ_T0042274.1 MGP_129S1SvImJ_G0022241.1 mouse_genomes_project 15 90794273 90804669 - MGP_129S1SvImJ_P0042274 Rabl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042275.1 MGP_129S1SvImJ_G0022241.1 mouse_genomes_project 15 90794301 90804618 - MGP_129S1SvImJ_P0042275 Rabl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042276.1 MGP_129S1SvImJ_G0022241.1 mouse_genomes_project 15 90794316 90795246 - MGP_129S1SvImJ_P0042276 Rabl2 protein_coding protein_coding MGP_129S1SvImJ_T0042277.1 MGP_129S1SvImJ_G0022241.1 mouse_genomes_project 15 90794562 90804665 - MGP_129S1SvImJ_P0042277 Rabl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042278.1 MGP_129S1SvImJ_G0022241.1 mouse_genomes_project 15 90797144 90804684 - Rabl2 protein_coding retained_intron MGP_129S1SvImJ_T0042279.1 MGP_129S1SvImJ_G0022241.1 mouse_genomes_project 15 90800686 90804655 - Rabl2 protein_coding processed_transcript MGP_129S1SvImJ_T0042434.1 MGP_129S1SvImJ_G0022289.1 mouse_genomes_project 15 99908986 99921057 - protein_coding processed_transcript MGP_129S1SvImJ_T0040596.1 MGP_129S1SvImJ_G0021720.1 mouse_genomes_project 15 7479941 7498986 + MGP_129S1SvImJ_P0040596 Agxt2 protein_coding protein_coding MGP_129S1SvImJ_T0040597.1 MGP_129S1SvImJ_G0021720.1 mouse_genomes_project 15 7479946 7538319 + MGP_129S1SvImJ_P0040597 Agxt2 protein_coding protein_coding MGP_129S1SvImJ_T0040598.1 MGP_129S1SvImJ_G0021720.1 mouse_genomes_project 15 7479946 7507268 + MGP_129S1SvImJ_P0040598 Agxt2 protein_coding protein_coding MGP_129S1SvImJ_T0040599.1 MGP_129S1SvImJ_G0021720.1 mouse_genomes_project 15 7479988 7537904 + MGP_129S1SvImJ_P0040599 Agxt2 protein_coding protein_coding MGP_129S1SvImJ_T0006824.1 MGP_129S1SvImJ_G0005628.1 mouse_genomes_project 15 104435783 104439349 + lincRNA lincRNA MGP_129S1SvImJ_T0041153.1 MGP_129S1SvImJ_G0021916.1 mouse_genomes_project 15 72195653 72229750 - MGP_129S1SvImJ_P0041153 Kcnk9 protein_coding protein_coding MGP_129S1SvImJ_T0010080.1 MGP_129S1SvImJ_G0008196.1 mouse_genomes_project 15 80390919 80391027 - Snord43 miRNA miRNA MGP_129S1SvImJ_T0042552.1 MGP_129S1SvImJ_G0022334.1 mouse_genomes_project 15 101437690 101443122 + MGP_129S1SvImJ_P0042552 Aqp2 protein_coding protein_coding MGP_129S1SvImJ_T0041624.1 MGP_129S1SvImJ_G0022056.1 mouse_genomes_project 15 79135871 79156400 + Sh3bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0041625.1 MGP_129S1SvImJ_G0022056.1 mouse_genomes_project 15 79135971 79148244 + MGP_129S1SvImJ_P0041625 Sh3bp1 protein_coding protein_coding MGP_129S1SvImJ_T0041626.1 MGP_129S1SvImJ_G0022056.1 mouse_genomes_project 15 79135971 79148248 + MGP_129S1SvImJ_P0041626 Sh3bp1 protein_coding protein_coding MGP_129S1SvImJ_T0041627.1 MGP_129S1SvImJ_G0022056.1 mouse_genomes_project 15 79135971 79148248 + MGP_129S1SvImJ_P0041627 Sh3bp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041628.1 MGP_129S1SvImJ_G0022056.1 mouse_genomes_project 15 79135971 79148248 + MGP_129S1SvImJ_P0041628 Sh3bp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041629.1 MGP_129S1SvImJ_G0022056.1 mouse_genomes_project 15 79135971 79148248 + MGP_129S1SvImJ_P0041629 Sh3bp1 protein_coding protein_coding MGP_129S1SvImJ_T0041630.1 MGP_129S1SvImJ_G0022056.1 mouse_genomes_project 15 79150115 79156885 + MGP_129S1SvImJ_P0041630 Sh3bp1 protein_coding protein_coding MGP_129S1SvImJ_T0042355.1 MGP_129S1SvImJ_G0022265.1 mouse_genomes_project 15 97315630 97319074 - MGP_129S1SvImJ_P0042355 A130051J06Rik protein_coding protein_coding MGP_129S1SvImJ_T0010117.1 MGP_129S1SvImJ_G0008233.1 mouse_genomes_project 15 105208879 105208964 + Mir196a-2 miRNA miRNA MGP_129S1SvImJ_T0042877.1 MGP_129S1SvImJ_G0022443.1 mouse_genomes_project 15 105722192 105769049 + MGP_129S1SvImJ_P0042877 Nckap1l protein_coding protein_coding MGP_129S1SvImJ_T0006799.1 MGP_129S1SvImJ_G0005612.1 mouse_genomes_project 15 83628094 83636325 + AW121686 lincRNA lincRNA MGP_129S1SvImJ_T0010120.1 MGP_129S1SvImJ_G0008236.1 mouse_genomes_project 15 105620112 105620183 - Mir6963 miRNA miRNA MGP_129S1SvImJ_T0042847.1 MGP_129S1SvImJ_G0022433.1 mouse_genomes_project 15 105395140 105399836 - MGP_129S1SvImJ_P0042847 Smug1 protein_coding protein_coding MGP_129S1SvImJ_T0041550.1 MGP_129S1SvImJ_G0022025.1 mouse_genomes_project 15 77585681 77591903 - MGP_129S1SvImJ_P0041550 protein_coding protein_coding MGP_129S1SvImJ_T0041622.1 MGP_129S1SvImJ_G0022054.1 mouse_genomes_project 15 79075720 79081595 - MGP_129S1SvImJ_P0041622 Lgals2 protein_coding protein_coding MGP_129S1SvImJ_T0042495.1 MGP_129S1SvImJ_G0022315.1 mouse_genomes_project 15 100641249 100644878 - MGP_129S1SvImJ_P0042495 Rhebl1 protein_coding protein_coding MGP_129S1SvImJ_T0042496.1 MGP_129S1SvImJ_G0022315.1 mouse_genomes_project 15 100641517 100644564 - Rhebl1 protein_coding processed_transcript MGP_129S1SvImJ_T0042497.1 MGP_129S1SvImJ_G0022315.1 mouse_genomes_project 15 100643004 100644220 - Rhebl1 protein_coding retained_intron MGP_129S1SvImJ_T0100730.1 MGP_129S1SvImJ_G0038797.1 mouse_genomes_project 15 28196340 28196418 - Gm23327 snoRNA snoRNA MGP_129S1SvImJ_T0040878.1 MGP_129S1SvImJ_G0021818.1 mouse_genomes_project 15 38332281 38406977 - MGP_129S1SvImJ_P0040878 Lrp12 protein_coding protein_coding MGP_129S1SvImJ_T0040879.1 MGP_129S1SvImJ_G0021818.1 mouse_genomes_project 15 38332281 38406771 - MGP_129S1SvImJ_P0040879 Lrp12 protein_coding protein_coding MGP_129S1SvImJ_T0040880.1 MGP_129S1SvImJ_G0021818.1 mouse_genomes_project 15 38368164 38406689 - Lrp12 protein_coding retained_intron MGP_129S1SvImJ_T0010088.1 MGP_129S1SvImJ_G0008204.1 mouse_genomes_project 15 83071342 83071402 + Gm28023 miRNA miRNA MGP_129S1SvImJ_T0042038.1 MGP_129S1SvImJ_G0022171.1 mouse_genomes_project 15 84606466 84802315 - MGP_129S1SvImJ_P0042038 Efcab6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042039.1 MGP_129S1SvImJ_G0022171.1 mouse_genomes_project 15 84606472 84813145 - MGP_129S1SvImJ_P0042039 Efcab6 protein_coding protein_coding MGP_129S1SvImJ_T0042040.1 MGP_129S1SvImJ_G0022171.1 mouse_genomes_project 15 84606474 84661626 - Efcab6 protein_coding processed_transcript MGP_129S1SvImJ_T0042041.1 MGP_129S1SvImJ_G0022171.1 mouse_genomes_project 15 84606527 84676328 - Efcab6 protein_coding retained_intron MGP_129S1SvImJ_T0042042.1 MGP_129S1SvImJ_G0022171.1 mouse_genomes_project 15 84612137 84624588 - Efcab6 protein_coding processed_transcript MGP_129S1SvImJ_T0042043.1 MGP_129S1SvImJ_G0022171.1 mouse_genomes_project 15 84667992 84686836 - MGP_129S1SvImJ_P0042043 Efcab6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042044.1 MGP_129S1SvImJ_G0022171.1 mouse_genomes_project 15 84705436 84708081 - Efcab6 protein_coding processed_transcript MGP_129S1SvImJ_T0042045.1 MGP_129S1SvImJ_G0022171.1 mouse_genomes_project 15 84712720 84731152 - Efcab6 protein_coding processed_transcript MGP_129S1SvImJ_T0042046.1 MGP_129S1SvImJ_G0022171.1 mouse_genomes_project 15 84767766 84813175 - Efcab6 protein_coding processed_transcript MGP_129S1SvImJ_T0041614.1 MGP_129S1SvImJ_G0022051.1 mouse_genomes_project 15 78969734 78988359 - MGP_129S1SvImJ_P0041614 Mfng protein_coding protein_coding MGP_129S1SvImJ_T0041615.1 MGP_129S1SvImJ_G0022051.1 mouse_genomes_project 15 78974337 78982061 - Mfng protein_coding retained_intron MGP_129S1SvImJ_T0041616.1 MGP_129S1SvImJ_G0022051.1 mouse_genomes_project 15 78977713 78982035 - Mfng protein_coding retained_intron MGP_129S1SvImJ_T0041617.1 MGP_129S1SvImJ_G0022051.1 mouse_genomes_project 15 78981736 78986780 - Mfng protein_coding processed_transcript MGP_129S1SvImJ_T0041498.1 MGP_129S1SvImJ_G0022010.1 mouse_genomes_project 15 76813144 76816088 + MGP_129S1SvImJ_P0041498 Lrrc14 protein_coding protein_coding MGP_129S1SvImJ_T0041499.1 MGP_129S1SvImJ_G0022010.1 mouse_genomes_project 15 76813159 76820217 + MGP_129S1SvImJ_P0041499 Lrrc14 protein_coding protein_coding MGP_129S1SvImJ_T0041500.1 MGP_129S1SvImJ_G0022010.1 mouse_genomes_project 15 76813160 76817553 + MGP_129S1SvImJ_P0041500 Lrrc14 protein_coding protein_coding MGP_129S1SvImJ_T0041501.1 MGP_129S1SvImJ_G0022010.1 mouse_genomes_project 15 76813164 76817602 + MGP_129S1SvImJ_P0041501 Lrrc14 protein_coding protein_coding MGP_129S1SvImJ_T0041502.1 MGP_129S1SvImJ_G0022010.1 mouse_genomes_project 15 76813164 76817570 + MGP_129S1SvImJ_P0041502 Lrrc14 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041503.1 MGP_129S1SvImJ_G0022010.1 mouse_genomes_project 15 76813170 76815441 + MGP_129S1SvImJ_P0041503 Lrrc14 protein_coding protein_coding MGP_129S1SvImJ_T0041504.1 MGP_129S1SvImJ_G0022010.1 mouse_genomes_project 15 76813184 76817648 + Lrrc14 protein_coding retained_intron MGP_129S1SvImJ_T0041505.1 MGP_129S1SvImJ_G0022010.1 mouse_genomes_project 15 76813194 76819166 + Lrrc14 protein_coding retained_intron MGP_129S1SvImJ_T0041506.1 MGP_129S1SvImJ_G0022010.1 mouse_genomes_project 15 76813194 76817267 + Lrrc14 protein_coding processed_transcript MGP_129S1SvImJ_T0041507.1 MGP_129S1SvImJ_G0022010.1 mouse_genomes_project 15 76813252 76817609 + MGP_129S1SvImJ_P0041507 Lrrc14 protein_coding protein_coding MGP_129S1SvImJ_T0041209.1 MGP_129S1SvImJ_G0021930.1 mouse_genomes_project 15 74484964 74492201 - MGP_129S1SvImJ_P0041209 Jrk protein_coding protein_coding MGP_129S1SvImJ_T0041553.1 MGP_129S1SvImJ_G0022028.1 mouse_genomes_project 15 77860121 77862038 + MGP_129S1SvImJ_P0041553 protein_coding protein_coding MGP_129S1SvImJ_T0041962.1 MGP_129S1SvImJ_G0022146.1 mouse_genomes_project 15 82879888 82889609 - MGP_129S1SvImJ_P0041962 Cyp2d22 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0041190.1 MGP_129S1SvImJ_G0021927.1 mouse_genomes_project 15 74292140 74369549 + MGP_129S1SvImJ_P0041190 Adgrb1 protein_coding protein_coding MGP_129S1SvImJ_T0041191.1 MGP_129S1SvImJ_G0021927.1 mouse_genomes_project 15 74292196 74369549 + MGP_129S1SvImJ_P0041191 Adgrb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041192.1 MGP_129S1SvImJ_G0021927.1 mouse_genomes_project 15 74292589 74369549 + MGP_129S1SvImJ_P0041192 Adgrb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041193.1 MGP_129S1SvImJ_G0021927.1 mouse_genomes_project 15 74316127 74319243 + MGP_129S1SvImJ_P0041193 Adgrb1 protein_coding protein_coding MGP_129S1SvImJ_T0041194.1 MGP_129S1SvImJ_G0021927.1 mouse_genomes_project 15 74336509 74354204 + MGP_129S1SvImJ_P0041194 Adgrb1 protein_coding protein_coding MGP_129S1SvImJ_T0041195.1 MGP_129S1SvImJ_G0021927.1 mouse_genomes_project 15 74338604 74352212 + MGP_129S1SvImJ_P0041195 Adgrb1 protein_coding protein_coding MGP_129S1SvImJ_T0041196.1 MGP_129S1SvImJ_G0021927.1 mouse_genomes_project 15 74341794 74369549 + MGP_129S1SvImJ_P0041196 Adgrb1 protein_coding protein_coding MGP_129S1SvImJ_T0041197.1 MGP_129S1SvImJ_G0021927.1 mouse_genomes_project 15 74341794 74369528 + MGP_129S1SvImJ_P0041197 Adgrb1 protein_coding protein_coding MGP_129S1SvImJ_T0041198.1 MGP_129S1SvImJ_G0021927.1 mouse_genomes_project 15 74341838 74352866 + MGP_129S1SvImJ_P0041198 Adgrb1 protein_coding protein_coding MGP_129S1SvImJ_T0041199.1 MGP_129S1SvImJ_G0021927.1 mouse_genomes_project 15 74350956 74369550 + Adgrb1 protein_coding processed_transcript MGP_129S1SvImJ_T0041200.1 MGP_129S1SvImJ_G0021927.1 mouse_genomes_project 15 74354227 74369550 + MGP_129S1SvImJ_P0041200 Adgrb1 protein_coding protein_coding MGP_129S1SvImJ_T0013078.1 MGP_129S1SvImJ_G0011167.1 mouse_genomes_project 15 10713316 10714135 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101863.1 MGP_129S1SvImJ_G0039801.1 mouse_genomes_project 15 75367400 75371624 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101864.1 MGP_129S1SvImJ_G0039801.1 mouse_genomes_project 15 75367760 75371231 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0041752.1 MGP_129S1SvImJ_G0022088.1 mouse_genomes_project 15 80123393 80133704 - MGP_129S1SvImJ_P0041752 Cbx6 protein_coding protein_coding MGP_129S1SvImJ_T0041753.1 MGP_129S1SvImJ_G0022088.1 mouse_genomes_project 15 80125631 80133730 - MGP_129S1SvImJ_P0041753 Cbx6 protein_coding protein_coding MGP_129S1SvImJ_T0041754.1 MGP_129S1SvImJ_G0022088.1 mouse_genomes_project 15 80128126 80133291 - Cbx6 protein_coding processed_transcript MGP_129S1SvImJ_T0041755.1 MGP_129S1SvImJ_G0022088.1 mouse_genomes_project 15 80128267 80133773 - MGP_129S1SvImJ_P0041755 Cbx6 protein_coding protein_coding MGP_129S1SvImJ_T0041756.1 MGP_129S1SvImJ_G0022088.1 mouse_genomes_project 15 80132064 80133818 - Cbx6 protein_coding processed_transcript MGP_129S1SvImJ_T0041757.1 MGP_129S1SvImJ_G0022088.1 mouse_genomes_project 15 80132737 80133767 - Cbx6 protein_coding processed_transcript MGP_129S1SvImJ_T0041885.1 MGP_129S1SvImJ_G0022120.1 mouse_genomes_project 15 82263623 82291477 + MGP_129S1SvImJ_P0041885 Tef protein_coding protein_coding MGP_129S1SvImJ_T0041886.1 MGP_129S1SvImJ_G0022120.1 mouse_genomes_project 15 82263909 82267252 + Tef protein_coding processed_transcript MGP_129S1SvImJ_T0041887.1 MGP_129S1SvImJ_G0022120.1 mouse_genomes_project 15 82263932 82266557 + Tef protein_coding processed_transcript MGP_129S1SvImJ_T0041888.1 MGP_129S1SvImJ_G0022120.1 mouse_genomes_project 15 82263939 82278215 + Tef protein_coding retained_intron MGP_129S1SvImJ_T0041889.1 MGP_129S1SvImJ_G0022120.1 mouse_genomes_project 15 82264028 82267114 + Tef protein_coding processed_transcript MGP_129S1SvImJ_T0041890.1 MGP_129S1SvImJ_G0022120.1 mouse_genomes_project 15 82272248 82284329 + MGP_129S1SvImJ_P0041890 Tef protein_coding protein_coding MGP_129S1SvImJ_T0041891.1 MGP_129S1SvImJ_G0022120.1 mouse_genomes_project 15 82272616 82291314 + MGP_129S1SvImJ_P0041891 Tef protein_coding protein_coding MGP_129S1SvImJ_T0041892.1 MGP_129S1SvImJ_G0022120.1 mouse_genomes_project 15 82273361 82276412 + MGP_129S1SvImJ_P0041892 Tef protein_coding protein_coding MGP_129S1SvImJ_T0041893.1 MGP_129S1SvImJ_G0022120.1 mouse_genomes_project 15 82283665 82284456 + Tef protein_coding processed_transcript MGP_129S1SvImJ_T0041894.1 MGP_129S1SvImJ_G0022120.1 mouse_genomes_project 15 82284015 82288395 + Tef protein_coding retained_intron MGP_129S1SvImJ_T0042370.1 MGP_129S1SvImJ_G0022273.1 mouse_genomes_project 15 98616794 98654242 - MGP_129S1SvImJ_P0042370 Slc38a4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0003666.1 MGP_129S1SvImJ_G0003318.1 mouse_genomes_project 15 105340834 105343647 + Gm10830 antisense antisense MGP_129S1SvImJ_T0040926.1 MGP_129S1SvImJ_G0021837.1 mouse_genomes_project 15 50727972 50813292 - MGP_129S1SvImJ_P0040926 Eif3h protein_coding protein_coding MGP_129S1SvImJ_T0041439.1 MGP_129S1SvImJ_G0021993.1 mouse_genomes_project 15 76532161 76534192 + MGP_129S1SvImJ_P0041439 Scx protein_coding protein_coding MGP_129S1SvImJ_T0101865.1 MGP_129S1SvImJ_G0039802.1 mouse_genomes_project 15 99927708 99935166 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101866.1 MGP_129S1SvImJ_G0039802.1 mouse_genomes_project 15 99927935 99935406 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0042766.1 MGP_129S1SvImJ_G0022410.1 mouse_genomes_project 15 104509271 104525201 - MGP_129S1SvImJ_P0042766 Aaas protein_coding protein_coding MGP_129S1SvImJ_T0013122.1 MGP_129S1SvImJ_G0011211.1 mouse_genomes_project 15 92159697 92160654 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0041023.1 MGP_129S1SvImJ_G0021875.1 mouse_genomes_project 15 57985812 58027129 - MGP_129S1SvImJ_P0041023 Tmem65 protein_coding protein_coding MGP_129S1SvImJ_T0042449.1 MGP_129S1SvImJ_G0022296.1 mouse_genomes_project 15 100155040 100162198 + MGP_129S1SvImJ_P0042449 Olfr282 protein_coding protein_coding MGP_129S1SvImJ_T0042450.1 MGP_129S1SvImJ_G0022296.1 mouse_genomes_project 15 100161752 100162680 + MGP_129S1SvImJ_P0042450 Olfr282 protein_coding protein_coding MGP_129S1SvImJ_T0100727.1 MGP_129S1SvImJ_G0038794.1 mouse_genomes_project 15 25105043 25105174 - Gm23903 snoRNA snoRNA MGP_129S1SvImJ_T0041421.1 MGP_129S1SvImJ_G0021991.1 mouse_genomes_project 15 76452885 76514491 + Mroh1 protein_coding processed_transcript MGP_129S1SvImJ_T0041422.1 MGP_129S1SvImJ_G0021991.1 mouse_genomes_project 15 76453137 76484344 + Mroh1 protein_coding processed_transcript MGP_129S1SvImJ_T0041423.1 MGP_129S1SvImJ_G0021991.1 mouse_genomes_project 15 76453137 76527776 + MGP_129S1SvImJ_P0041423 Mroh1 protein_coding protein_coding MGP_129S1SvImJ_T0041424.1 MGP_129S1SvImJ_G0021991.1 mouse_genomes_project 15 76453147 76527773 + Mroh1 protein_coding retained_intron MGP_129S1SvImJ_T0041425.1 MGP_129S1SvImJ_G0021991.1 mouse_genomes_project 15 76453156 76476928 + MGP_129S1SvImJ_P0041425 Mroh1 protein_coding protein_coding MGP_129S1SvImJ_T0041426.1 MGP_129S1SvImJ_G0021991.1 mouse_genomes_project 15 76453177 76484343 + MGP_129S1SvImJ_P0041426 Mroh1 protein_coding protein_coding MGP_129S1SvImJ_T0041427.1 MGP_129S1SvImJ_G0021991.1 mouse_genomes_project 15 76463568 76514491 + MGP_129S1SvImJ_P0041427 Mroh1 protein_coding protein_coding MGP_129S1SvImJ_T0041428.1 MGP_129S1SvImJ_G0021991.1 mouse_genomes_project 15 76465843 76527716 + MGP_129S1SvImJ_P0041428 Mroh1 protein_coding protein_coding MGP_129S1SvImJ_T0041429.1 MGP_129S1SvImJ_G0021991.1 mouse_genomes_project 15 76502646 76527776 + Mroh1 protein_coding retained_intron MGP_129S1SvImJ_T0041430.1 MGP_129S1SvImJ_G0021991.1 mouse_genomes_project 15 76503403 76508656 + MGP_129S1SvImJ_P0041430 Mroh1 protein_coding protein_coding MGP_129S1SvImJ_T0041431.1 MGP_129S1SvImJ_G0021991.1 mouse_genomes_project 15 76515790 76521570 + Mroh1 protein_coding retained_intron MGP_129S1SvImJ_T0041432.1 MGP_129S1SvImJ_G0021991.1 mouse_genomes_project 15 76524392 76525958 + Mroh1 protein_coding retained_intron MGP_129S1SvImJ_T0041433.1 MGP_129S1SvImJ_G0021991.1 mouse_genomes_project 15 76525365 76526123 + Mroh1 protein_coding retained_intron MGP_129S1SvImJ_T0041434.1 MGP_129S1SvImJ_G0021991.1 mouse_genomes_project 15 76526551 76527122 + Mroh1 protein_coding retained_intron MGP_129S1SvImJ_T0041435.1 MGP_129S1SvImJ_G0021991.1 mouse_genomes_project 15 76526599 76527776 + MGP_129S1SvImJ_P0041435 Mroh1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041436.1 MGP_129S1SvImJ_G0021991.1 mouse_genomes_project 15 76526876 76527776 + MGP_129S1SvImJ_P0041436 Mroh1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041437.1 MGP_129S1SvImJ_G0021991.1 mouse_genomes_project 15 76526891 76527775 + Mroh1 protein_coding retained_intron MGP_129S1SvImJ_T0098513.1 MGP_129S1SvImJ_G0036598.1 mouse_genomes_project 15 102407119 102407229 + n-R5s43 rRNA rRNA MGP_129S1SvImJ_T0000971.1 MGP_129S1SvImJ_G0000903.1 mouse_genomes_project 15 105296331 105297358 - TEC TEC MGP_129S1SvImJ_T0042811.1 MGP_129S1SvImJ_G0022421.1 mouse_genomes_project 15 104716144 104824266 - MGP_129S1SvImJ_P0042811 protein_coding protein_coding MGP_129S1SvImJ_T0042812.1 MGP_129S1SvImJ_G0022421.1 mouse_genomes_project 15 104724133 104824643 - MGP_129S1SvImJ_P0042812 protein_coding protein_coding MGP_129S1SvImJ_T0042813.1 MGP_129S1SvImJ_G0022421.1 mouse_genomes_project 15 104724133 104724523 - MGP_129S1SvImJ_P0042813 protein_coding protein_coding MGP_129S1SvImJ_T0042814.1 MGP_129S1SvImJ_G0022421.1 mouse_genomes_project 15 104729069 104824632 - MGP_129S1SvImJ_P0042814 protein_coding protein_coding MGP_129S1SvImJ_T0042815.1 MGP_129S1SvImJ_G0022421.1 mouse_genomes_project 15 104732144 104824646 - MGP_129S1SvImJ_P0042815 protein_coding protein_coding MGP_129S1SvImJ_T0042816.1 MGP_129S1SvImJ_G0022421.1 mouse_genomes_project 15 104732824 104824281 - MGP_129S1SvImJ_P0042816 protein_coding protein_coding MGP_129S1SvImJ_T0042817.1 MGP_129S1SvImJ_G0022421.1 mouse_genomes_project 15 104742061 104824631 - protein_coding retained_intron MGP_129S1SvImJ_T0042818.1 MGP_129S1SvImJ_G0022421.1 mouse_genomes_project 15 104744125 104824657 - MGP_129S1SvImJ_P0042818 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042819.1 MGP_129S1SvImJ_G0022421.1 mouse_genomes_project 15 104744177 104824115 - MGP_129S1SvImJ_P0042819 protein_coding protein_coding MGP_129S1SvImJ_T0042820.1 MGP_129S1SvImJ_G0022421.1 mouse_genomes_project 15 104748170 104824260 - MGP_129S1SvImJ_P0042820 protein_coding protein_coding MGP_129S1SvImJ_T0042821.1 MGP_129S1SvImJ_G0022421.1 mouse_genomes_project 15 104748170 104824639 - MGP_129S1SvImJ_P0042821 protein_coding protein_coding MGP_129S1SvImJ_T0042822.1 MGP_129S1SvImJ_G0022421.1 mouse_genomes_project 15 104759916 104824263 - protein_coding retained_intron MGP_129S1SvImJ_T0042823.1 MGP_129S1SvImJ_G0022421.1 mouse_genomes_project 15 104794237 104824657 - protein_coding retained_intron MGP_129S1SvImJ_T0042082.1 MGP_129S1SvImJ_G0022185.1 mouse_genomes_project 15 85755381 85802156 - MGP_129S1SvImJ_P0042082 5031439G07Rik protein_coding protein_coding MGP_129S1SvImJ_T0042083.1 MGP_129S1SvImJ_G0022185.1 mouse_genomes_project 15 85759431 85772414 - 5031439G07Rik protein_coding retained_intron MGP_129S1SvImJ_T0042084.1 MGP_129S1SvImJ_G0022185.1 mouse_genomes_project 15 85767117 85802759 - 5031439G07Rik protein_coding processed_transcript MGP_129S1SvImJ_T0041632.1 MGP_129S1SvImJ_G0022058.1 mouse_genomes_project 15 79174662 79180640 + MGP_129S1SvImJ_P0041632 Nol12 protein_coding protein_coding MGP_129S1SvImJ_T0041633.1 MGP_129S1SvImJ_G0022058.1 mouse_genomes_project 15 79174701 79180336 + MGP_129S1SvImJ_P0041633 Nol12 protein_coding protein_coding MGP_129S1SvImJ_T0041634.1 MGP_129S1SvImJ_G0022058.1 mouse_genomes_project 15 79174706 79180572 + MGP_129S1SvImJ_P0041634 Nol12 protein_coding protein_coding MGP_129S1SvImJ_T0041635.1 MGP_129S1SvImJ_G0022058.1 mouse_genomes_project 15 79174919 79176293 + MGP_129S1SvImJ_P0041635 Nol12 protein_coding protein_coding MGP_129S1SvImJ_T0003647.1 MGP_129S1SvImJ_G0003302.1 mouse_genomes_project 15 90679678 90690589 + C230037L18Rik antisense antisense MGP_129S1SvImJ_T0003648.1 MGP_129S1SvImJ_G0003302.1 mouse_genomes_project 15 90679694 90683655 + C230037L18Rik antisense antisense MGP_129S1SvImJ_T0003649.1 MGP_129S1SvImJ_G0003302.1 mouse_genomes_project 15 90683480 90690524 + C230037L18Rik antisense antisense MGP_129S1SvImJ_T0042369.1 MGP_129S1SvImJ_G0022272.1 mouse_genomes_project 15 98377660 98378041 - MGP_129S1SvImJ_P0042369 Gm8888 protein_coding protein_coding MGP_129S1SvImJ_T0040799.1 MGP_129S1SvImJ_G0021793.1 mouse_genomes_project 15 34618549 34662598 - MGP_129S1SvImJ_P0040799 Rnf19a protein_coding protein_coding MGP_129S1SvImJ_T0006822.1 MGP_129S1SvImJ_G0005627.1 mouse_genomes_project 15 103344438 103347842 + 6030408B16Rik lincRNA lincRNA MGP_129S1SvImJ_T0006823.1 MGP_129S1SvImJ_G0005627.1 mouse_genomes_project 15 103344458 103348647 + 6030408B16Rik lincRNA lincRNA MGP_129S1SvImJ_T0041919.1 MGP_129S1SvImJ_G0022130.1 mouse_genomes_project 15 82473422 82498567 - MGP_129S1SvImJ_P0041919 Desi1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041920.1 MGP_129S1SvImJ_G0022130.1 mouse_genomes_project 15 82473422 82498577 - MGP_129S1SvImJ_P0041920 Desi1 protein_coding protein_coding MGP_129S1SvImJ_T0041921.1 MGP_129S1SvImJ_G0022130.1 mouse_genomes_project 15 82474746 82498639 - MGP_129S1SvImJ_P0041921 Desi1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041922.1 MGP_129S1SvImJ_G0022130.1 mouse_genomes_project 15 82475544 82517042 - Desi1 protein_coding processed_transcript MGP_129S1SvImJ_T0041923.1 MGP_129S1SvImJ_G0022130.1 mouse_genomes_project 15 82475557 82498425 - MGP_129S1SvImJ_P0041923 Desi1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041924.1 MGP_129S1SvImJ_G0022130.1 mouse_genomes_project 15 82475620 82498451 - MGP_129S1SvImJ_P0041924 Desi1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042809.1 MGP_129S1SvImJ_G0022420.1 mouse_genomes_project 15 104714041 104824260 - MGP_129S1SvImJ_P0042809 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042703.1 MGP_129S1SvImJ_G0022380.1 mouse_genomes_project 15 103663746 103674260 - MGP_129S1SvImJ_P0042703 Krt75 protein_coding protein_coding MGP_129S1SvImJ_T0042092.1 MGP_129S1SvImJ_G0022191.1 mouse_genomes_project 15 86196279 86332605 + MGP_129S1SvImJ_P0042092 Atxn10 protein_coding protein_coding MGP_129S1SvImJ_T0041275.1 MGP_129S1SvImJ_G0021956.1 mouse_genomes_project 15 75680690 75704185 - MGP_129S1SvImJ_P0041275 Top1mt protein_coding protein_coding MGP_129S1SvImJ_T0042371.1 MGP_129S1SvImJ_G0022274.1 mouse_genomes_project 15 98888507 98891755 - MGP_129S1SvImJ_P0042371 Amigo2 protein_coding protein_coding MGP_129S1SvImJ_T0042055.1 MGP_129S1SvImJ_G0022177.1 mouse_genomes_project 15 85112376 85115398 + Parvg protein_coding processed_transcript MGP_129S1SvImJ_T0042056.1 MGP_129S1SvImJ_G0022177.1 mouse_genomes_project 15 85113070 85131272 + MGP_129S1SvImJ_P0042056 Parvg protein_coding protein_coding MGP_129S1SvImJ_T0042057.1 MGP_129S1SvImJ_G0022177.1 mouse_genomes_project 15 85113084 85117238 + MGP_129S1SvImJ_P0042057 Parvg protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042058.1 MGP_129S1SvImJ_G0022177.1 mouse_genomes_project 15 85113112 85117224 + MGP_129S1SvImJ_P0042058 Parvg protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042059.1 MGP_129S1SvImJ_G0022177.1 mouse_genomes_project 15 85113145 85118443 + Parvg protein_coding processed_transcript MGP_129S1SvImJ_T0042060.1 MGP_129S1SvImJ_G0022177.1 mouse_genomes_project 15 85114466 85117274 + MGP_129S1SvImJ_P0042060 Parvg protein_coding protein_coding MGP_129S1SvImJ_T0042061.1 MGP_129S1SvImJ_G0022177.1 mouse_genomes_project 15 85114466 85131308 + MGP_129S1SvImJ_P0042061 Parvg protein_coding protein_coding MGP_129S1SvImJ_T0003643.1 MGP_129S1SvImJ_G0003298.1 mouse_genomes_project 15 83540096 83547570 + Gm20324 antisense antisense MGP_129S1SvImJ_T0010050.1 MGP_129S1SvImJ_G0008166.1 mouse_genomes_project 15 25641894 25641959 + Mir7117 miRNA miRNA MGP_129S1SvImJ_T0010095.1 MGP_129S1SvImJ_G0008211.1 mouse_genomes_project 15 83602432 83602511 - Mir3080 miRNA miRNA MGP_129S1SvImJ_T0003633.1 MGP_129S1SvImJ_G0003292.1 mouse_genomes_project 15 74569992 74587299 + Gm17189 antisense antisense MGP_129S1SvImJ_T0042021.1 MGP_129S1SvImJ_G0022168.1 mouse_genomes_project 15 84289749 84309771 - MGP_129S1SvImJ_P0042021 Ttll12 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042022.1 MGP_129S1SvImJ_G0022168.1 mouse_genomes_project 15 84290274 84309771 - MGP_129S1SvImJ_P0042022 Ttll12 protein_coding protein_coding MGP_129S1SvImJ_T0042023.1 MGP_129S1SvImJ_G0022168.1 mouse_genomes_project 15 84296387 84301514 - Ttll12 protein_coding retained_intron MGP_129S1SvImJ_T0013108.1 MGP_129S1SvImJ_G0011197.1 mouse_genomes_project 15 75784606 75876521 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0042466.1 MGP_129S1SvImJ_G0022302.1 mouse_genomes_project 15 100307356 100325554 + MGP_129S1SvImJ_P0042466 4930415O20Rik protein_coding protein_coding MGP_129S1SvImJ_T0041967.1 MGP_129S1SvImJ_G0022151.1 mouse_genomes_project 15 83228156 83233041 - MGP_129S1SvImJ_P0041967 Cyp2d34 protein_coding protein_coding MGP_129S1SvImJ_T0010103.1 MGP_129S1SvImJ_G0008219.1 mouse_genomes_project 15 90338690 90338751 - Mir7118 miRNA miRNA MGP_129S1SvImJ_T0000964.1 MGP_129S1SvImJ_G0000896.1 mouse_genomes_project 15 62913979 62925742 + TEC TEC MGP_129S1SvImJ_T0100761.1 MGP_129S1SvImJ_G0038828.1 mouse_genomes_project 15 99760220 99760349 + Gm25668 snoRNA snoRNA MGP_129S1SvImJ_T0042713.1 MGP_129S1SvImJ_G0022389.1 mouse_genomes_project 15 103980410 103985769 - MGP_129S1SvImJ_P0042713 Krt1 protein_coding protein_coding MGP_129S1SvImJ_T0041803.1 MGP_129S1SvImJ_G0022101.1 mouse_genomes_project 15 80983546 81018706 + MGP_129S1SvImJ_P0041803 Grap2 protein_coding protein_coding MGP_129S1SvImJ_T0041554.1 MGP_129S1SvImJ_G0022029.1 mouse_genomes_project 15 77860121 77862039 + MGP_129S1SvImJ_P0041554 Apol9a protein_coding protein_coding MGP_129S1SvImJ_T0040900.1 MGP_129S1SvImJ_G0021830.1 mouse_genomes_project 15 43045480 43057426 + MGP_129S1SvImJ_P0040900 Eny2 protein_coding protein_coding MGP_129S1SvImJ_T0010075.1 MGP_129S1SvImJ_G0008191.1 mouse_genomes_project 15 79245492 79245554 + Mir6956 miRNA miRNA MGP_129S1SvImJ_T0041282.1 MGP_129S1SvImJ_G0021959.1 mouse_genomes_project 15 75784113 75877848 - MGP_129S1SvImJ_P0041282 Zc3h3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0041283.1 MGP_129S1SvImJ_G0021959.1 mouse_genomes_project 15 75784119 75877831 - MGP_129S1SvImJ_P0041283 Zc3h3 protein_coding protein_coding MGP_129S1SvImJ_T0041555.1 MGP_129S1SvImJ_G0022030.1 mouse_genomes_project 15 77873901 77879171 - MGP_129S1SvImJ_P0041555 Apol8 protein_coding protein_coding MGP_129S1SvImJ_T0041556.1 MGP_129S1SvImJ_G0022030.1 mouse_genomes_project 15 77874715 77881324 - MGP_129S1SvImJ_P0041556 Apol8 protein_coding protein_coding MGP_129S1SvImJ_T0003630.1 MGP_129S1SvImJ_G0003290.1 mouse_genomes_project 15 71475926 71479599 + Gm16308 antisense antisense MGP_129S1SvImJ_T0042374.1 MGP_129S1SvImJ_G0022277.1 mouse_genomes_project 15 99381190 99401578 - MGP_129S1SvImJ_P0042374 Endou protein_coding protein_coding MGP_129S1SvImJ_T0042375.1 MGP_129S1SvImJ_G0022277.1 mouse_genomes_project 15 99381190 99391322 - MGP_129S1SvImJ_P0042375 Endou protein_coding protein_coding MGP_129S1SvImJ_T0013107.1 MGP_129S1SvImJ_G0011196.1 mouse_genomes_project 15 74501248 74501392 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0041732.1 MGP_129S1SvImJ_G0022082.1 mouse_genomes_project 15 79974908 79988525 - MGP_129S1SvImJ_P0041732 Josd1 protein_coding protein_coding MGP_129S1SvImJ_T0040898.1 MGP_129S1SvImJ_G0021829.1 mouse_genomes_project 15 42992101 43045677 - MGP_129S1SvImJ_P0040898 Nudcd1 protein_coding protein_coding MGP_129S1SvImJ_T0040899.1 MGP_129S1SvImJ_G0021829.1 mouse_genomes_project 15 42993268 43045147 - MGP_129S1SvImJ_P0040899 Nudcd1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0010073.1 MGP_129S1SvImJ_G0008189.1 mouse_genomes_project 15 78539227 78539289 + Mir7676-2 miRNA miRNA MGP_129S1SvImJ_T0041532.1 MGP_129S1SvImJ_G0022020.1 mouse_genomes_project 15 77187240 77198628 + MGP_129S1SvImJ_P0041532 Apol6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041533.1 MGP_129S1SvImJ_G0022020.1 mouse_genomes_project 15 77187586 77194678 + MGP_129S1SvImJ_P0041533 Apol6 protein_coding protein_coding MGP_129S1SvImJ_T0041534.1 MGP_129S1SvImJ_G0022020.1 mouse_genomes_project 15 77187717 77193029 + MGP_129S1SvImJ_P0041534 Apol6 protein_coding protein_coding MGP_129S1SvImJ_T0041535.1 MGP_129S1SvImJ_G0022020.1 mouse_genomes_project 15 77187787 77199437 + MGP_129S1SvImJ_P0041535 Apol6 protein_coding protein_coding MGP_129S1SvImJ_T0041536.1 MGP_129S1SvImJ_G0022020.1 mouse_genomes_project 15 77187789 77193650 + MGP_129S1SvImJ_P0041536 Apol6 protein_coding protein_coding MGP_129S1SvImJ_T0041537.1 MGP_129S1SvImJ_G0022020.1 mouse_genomes_project 15 77187998 77188750 + Apol6 protein_coding processed_transcript MGP_129S1SvImJ_T0041538.1 MGP_129S1SvImJ_G0022020.1 mouse_genomes_project 15 77195080 77198374 + Apol6 protein_coding processed_transcript MGP_129S1SvImJ_T0006826.1 MGP_129S1SvImJ_G0005630.1 mouse_genomes_project 15 105179735 105183404 - Hotair lincRNA lincRNA MGP_129S1SvImJ_T0042728.1 MGP_129S1SvImJ_G0022400.1 mouse_genomes_project 15 104295489 104300775 + MGP_129S1SvImJ_P0042728 Igfbp6 protein_coding protein_coding MGP_129S1SvImJ_T0042457.1 MGP_129S1SvImJ_G0022301.1 mouse_genomes_project 15 100271888 100307276 - MGP_129S1SvImJ_P0042457 Ccnt1 protein_coding protein_coding MGP_129S1SvImJ_T0042458.1 MGP_129S1SvImJ_G0022301.1 mouse_genomes_project 15 100271898 100276732 - Ccnt1 protein_coding processed_transcript MGP_129S1SvImJ_T0042459.1 MGP_129S1SvImJ_G0022301.1 mouse_genomes_project 15 100276922 100303989 - MGP_129S1SvImJ_P0042459 Ccnt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042460.1 MGP_129S1SvImJ_G0022301.1 mouse_genomes_project 15 100276922 100303989 - MGP_129S1SvImJ_P0042460 Ccnt1 protein_coding protein_coding MGP_129S1SvImJ_T0042461.1 MGP_129S1SvImJ_G0022301.1 mouse_genomes_project 15 100277850 100289536 - Ccnt1 protein_coding retained_intron MGP_129S1SvImJ_T0042462.1 MGP_129S1SvImJ_G0022301.1 mouse_genomes_project 15 100278051 100280737 - Ccnt1 protein_coding retained_intron MGP_129S1SvImJ_T0042463.1 MGP_129S1SvImJ_G0022301.1 mouse_genomes_project 15 100278278 100300130 - Ccnt1 protein_coding retained_intron MGP_129S1SvImJ_T0042464.1 MGP_129S1SvImJ_G0022301.1 mouse_genomes_project 15 100282387 100303898 - Ccnt1 protein_coding retained_intron MGP_129S1SvImJ_T0042465.1 MGP_129S1SvImJ_G0022301.1 mouse_genomes_project 15 100293453 100304033 - Ccnt1 protein_coding retained_intron MGP_129S1SvImJ_T0041229.1 MGP_129S1SvImJ_G0021942.1 mouse_genomes_project 15 74623752 74634083 - MGP_129S1SvImJ_P0041229 Cyp11b1 protein_coding protein_coding MGP_129S1SvImJ_T0098832.1 MGP_129S1SvImJ_G0036913.1 mouse_genomes_project 15 35675795 35676556 + Gm16137 sense_intronic sense_intronic MGP_129S1SvImJ_T0042330.1 MGP_129S1SvImJ_G0022256.1 mouse_genomes_project 15 94811068 94916079 + MGP_129S1SvImJ_P0042330 Pphln1 protein_coding protein_coding MGP_129S1SvImJ_T0042331.1 MGP_129S1SvImJ_G0022256.1 mouse_genomes_project 15 94811068 94916079 + MGP_129S1SvImJ_P0042331 Pphln1 protein_coding protein_coding MGP_129S1SvImJ_T0042332.1 MGP_129S1SvImJ_G0022256.1 mouse_genomes_project 15 94811068 94916079 + MGP_129S1SvImJ_P0042332 Pphln1 protein_coding protein_coding MGP_129S1SvImJ_T0042333.1 MGP_129S1SvImJ_G0022256.1 mouse_genomes_project 15 94811182 94915665 + MGP_129S1SvImJ_P0042333 Pphln1 protein_coding protein_coding MGP_129S1SvImJ_T0006794.1 MGP_129S1SvImJ_G0005608.1 mouse_genomes_project 15 79989792 79993028 - Gm26884 lincRNA lincRNA MGP_129S1SvImJ_T0040794.1 MGP_129S1SvImJ_G0021790.1 mouse_genomes_project 15 34529686 34544583 - MGP_129S1SvImJ_P0040794 Fbxo43 protein_coding protein_coding MGP_129S1SvImJ_T0010072.1 MGP_129S1SvImJ_G0008188.1 mouse_genomes_project 15 76507960 76508020 + Mir6954 miRNA miRNA MGP_129S1SvImJ_T0011413.1 MGP_129S1SvImJ_G0009529.1 mouse_genomes_project 15 78560467 78560577 + Gm26329 misc_RNA misc_RNA MGP_129S1SvImJ_T0041419.1 MGP_129S1SvImJ_G0021989.1 mouse_genomes_project 15 76439414 76441920 + MGP_129S1SvImJ_P0041419 Hgh1 protein_coding protein_coding MGP_129S1SvImJ_T0011415.1 MGP_129S1SvImJ_G0009531.1 mouse_genomes_project 15 92928202 92928488 - Gm25389 misc_RNA misc_RNA MGP_129S1SvImJ_T0041221.1 MGP_129S1SvImJ_G0021938.1 mouse_genomes_project 15 74556883 74564765 - MGP_129S1SvImJ_P0041221 D730001G18Rik protein_coding protein_coding MGP_129S1SvImJ_T0041222.1 MGP_129S1SvImJ_G0021938.1 mouse_genomes_project 15 74556884 74564800 - MGP_129S1SvImJ_P0041222 D730001G18Rik protein_coding protein_coding MGP_129S1SvImJ_T0041917.1 MGP_129S1SvImJ_G0022128.1 mouse_genomes_project 15 82458266 82461048 + MGP_129S1SvImJ_P0041917 1700029P11Rik protein_coding protein_coding MGP_129S1SvImJ_T0006773.1 MGP_129S1SvImJ_G0005599.1 mouse_genomes_project 15 44995447 45045343 + 1700022A22Rik lincRNA lincRNA MGP_129S1SvImJ_T0006774.1 MGP_129S1SvImJ_G0005599.1 mouse_genomes_project 15 44995459 45032459 + 1700022A22Rik lincRNA lincRNA MGP_129S1SvImJ_T0006775.1 MGP_129S1SvImJ_G0005599.1 mouse_genomes_project 15 44995473 45045392 + 1700022A22Rik lincRNA lincRNA MGP_129S1SvImJ_T0010079.1 MGP_129S1SvImJ_G0008195.1 mouse_genomes_project 15 80298394 80298485 - Mir7213 miRNA miRNA MGP_129S1SvImJ_T0042239.1 MGP_129S1SvImJ_G0022233.1 mouse_genomes_project 15 90582689 90605365 - MGP_129S1SvImJ_P0042239 Syce3 protein_coding protein_coding MGP_129S1SvImJ_T0042240.1 MGP_129S1SvImJ_G0022233.1 mouse_genomes_project 15 90582689 90605605 - MGP_129S1SvImJ_P0042240 Syce3 protein_coding protein_coding MGP_129S1SvImJ_T0040667.1 MGP_129S1SvImJ_G0021741.1 mouse_genomes_project 15 10288819 10429525 - MGP_129S1SvImJ_P0040667 Cdh6 protein_coding protein_coding MGP_129S1SvImJ_T0040947.1 MGP_129S1SvImJ_G0021849.1 mouse_genomes_project 15 53795937 53805573 + MGP_129S1SvImJ_P0040947 Nov protein_coding protein_coding MGP_129S1SvImJ_T0010109.1 MGP_129S1SvImJ_G0008225.1 mouse_genomes_project 15 102633842 102633909 - Mir6961 miRNA miRNA MGP_129S1SvImJ_T0010096.1 MGP_129S1SvImJ_G0008212.1 mouse_genomes_project 15 84222826 84222903 + Gm24575 miRNA miRNA MGP_129S1SvImJ_T0099443.1 MGP_129S1SvImJ_G0037510.1 mouse_genomes_project 15 32846669 32846779 + Gm22208 snRNA snRNA MGP_129S1SvImJ_T0042514.1 MGP_129S1SvImJ_G0022325.1 mouse_genomes_project 15 101039116 101062740 + MGP_129S1SvImJ_P0042514 Kcnh3 protein_coding protein_coding MGP_129S1SvImJ_T0011418.1 MGP_129S1SvImJ_G0009534.1 mouse_genomes_project 15 100982338 100982426 - Gm25057 misc_RNA misc_RNA MGP_129S1SvImJ_T0099480.1 MGP_129S1SvImJ_G0037547.1 mouse_genomes_project 15 94752270 94752374 + Gm26371 snRNA snRNA MGP_129S1SvImJ_T0003657.1 MGP_129S1SvImJ_G0003310.1 mouse_genomes_project 15 101650720 101668008 + Gm17058 antisense antisense MGP_129S1SvImJ_T0010085.1 MGP_129S1SvImJ_G0008201.1 mouse_genomes_project 15 82934449 82934509 - Gm27331 miRNA miRNA MGP_129S1SvImJ_T0042685.1 MGP_129S1SvImJ_G0022368.1 mouse_genomes_project 15 103314939 103322804 + MGP_129S1SvImJ_P0042685 Nr4a1 protein_coding protein_coding MGP_129S1SvImJ_T0041792.1 MGP_129S1SvImJ_G0022096.1 mouse_genomes_project 15 80568485 80585764 + MGP_129S1SvImJ_P0041792 Mief1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042359.1 MGP_129S1SvImJ_G0022268.1 mouse_genomes_project 15 97861627 97933102 + MGP_129S1SvImJ_P0042359 Arid2 protein_coding protein_coding MGP_129S1SvImJ_T0042360.1 MGP_129S1SvImJ_G0022268.1 mouse_genomes_project 15 97861682 97985959 + MGP_129S1SvImJ_P0042360 Arid2 protein_coding protein_coding MGP_129S1SvImJ_T0042361.1 MGP_129S1SvImJ_G0022268.1 mouse_genomes_project 15 97937903 97940878 + Arid2 protein_coding retained_intron MGP_129S1SvImJ_T0042362.1 MGP_129S1SvImJ_G0022268.1 mouse_genomes_project 15 97953865 97984568 + Arid2 protein_coding retained_intron MGP_129S1SvImJ_T0041468.1 MGP_129S1SvImJ_G0022001.1 mouse_genomes_project 15 76700231 76704659 - MGP_129S1SvImJ_P0041468 Slc39a4 protein_coding protein_coding MGP_129S1SvImJ_T0040783.1 MGP_129S1SvImJ_G0021787.1 mouse_genomes_project 15 33740807 34303056 + MGP_129S1SvImJ_P0040783 Vps13b protein_coding protein_coding MGP_129S1SvImJ_T0041495.1 MGP_129S1SvImJ_G0022007.1 mouse_genomes_project 15 76798850 76801764 + MGP_129S1SvImJ_P0041495 Gpt protein_coding protein_coding MGP_129S1SvImJ_T0011400.1 MGP_129S1SvImJ_G0009516.1 mouse_genomes_project 15 671283 671553 + Gm23228 misc_RNA misc_RNA MGP_129S1SvImJ_T0042796.1 MGP_129S1SvImJ_G0022418.1 mouse_genomes_project 15 104707997 104713873 + MGP_129S1SvImJ_P0042796 Tarbp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042797.1 MGP_129S1SvImJ_G0022418.1 mouse_genomes_project 15 104708051 104710786 + Tarbp2 protein_coding retained_intron MGP_129S1SvImJ_T0042798.1 MGP_129S1SvImJ_G0022418.1 mouse_genomes_project 15 104708232 104713875 + Tarbp2 protein_coding retained_intron MGP_129S1SvImJ_T0042799.1 MGP_129S1SvImJ_G0022418.1 mouse_genomes_project 15 104708260 104711555 + MGP_129S1SvImJ_P0042799 Tarbp2 protein_coding protein_coding MGP_129S1SvImJ_T0042800.1 MGP_129S1SvImJ_G0022418.1 mouse_genomes_project 15 104708281 104716640 + MGP_129S1SvImJ_P0042800 Tarbp2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042801.1 MGP_129S1SvImJ_G0022418.1 mouse_genomes_project 15 104708303 104709526 + Tarbp2 protein_coding retained_intron MGP_129S1SvImJ_T0042802.1 MGP_129S1SvImJ_G0022418.1 mouse_genomes_project 15 104708362 104713025 + Tarbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0042803.1 MGP_129S1SvImJ_G0022418.1 mouse_genomes_project 15 104708373 104712145 + Tarbp2 protein_coding retained_intron MGP_129S1SvImJ_T0042804.1 MGP_129S1SvImJ_G0022418.1 mouse_genomes_project 15 104708531 104712357 + MGP_129S1SvImJ_P0042804 Tarbp2 protein_coding protein_coding MGP_129S1SvImJ_T0042805.1 MGP_129S1SvImJ_G0022418.1 mouse_genomes_project 15 104708604 104711886 + MGP_129S1SvImJ_P0042805 Tarbp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042806.1 MGP_129S1SvImJ_G0022418.1 mouse_genomes_project 15 104708607 104712708 + MGP_129S1SvImJ_P0042806 Tarbp2 protein_coding protein_coding MGP_129S1SvImJ_T0042807.1 MGP_129S1SvImJ_G0022418.1 mouse_genomes_project 15 104710845 104712246 + Tarbp2 protein_coding retained_intron MGP_129S1SvImJ_T0040866.1 MGP_129S1SvImJ_G0021813.1 mouse_genomes_project 15 37513817 37534071 - MGP_129S1SvImJ_P0040866 Slc25a32 protein_coding protein_coding MGP_129S1SvImJ_T0099470.1 MGP_129S1SvImJ_G0037537.1 mouse_genomes_project 15 77974193 77974293 - Gm22107 snRNA snRNA MGP_129S1SvImJ_T0042509.1 MGP_129S1SvImJ_G0022321.1 mouse_genomes_project 15 100880904 100889761 + MGP_129S1SvImJ_P0042509 Troap protein_coding protein_coding MGP_129S1SvImJ_T0013100.1 MGP_129S1SvImJ_G0011189.1 mouse_genomes_project 15 59237727 59238177 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0042866.1 MGP_129S1SvImJ_G0022440.1 mouse_genomes_project 15 105613978 105637523 - MGP_129S1SvImJ_P0042866 Itga5 protein_coding protein_coding MGP_129S1SvImJ_T0040677.1 MGP_129S1SvImJ_G0021746.1 mouse_genomes_project 15 20406400 21291127 + MGP_129S1SvImJ_P0040677 Cdh18 protein_coding protein_coding MGP_129S1SvImJ_T0040678.1 MGP_129S1SvImJ_G0021746.1 mouse_genomes_project 15 20925722 21080390 + Cdh18 protein_coding retained_intron MGP_129S1SvImJ_T0040679.1 MGP_129S1SvImJ_G0021746.1 mouse_genomes_project 15 20925730 21345310 + Cdh18 protein_coding retained_intron MGP_129S1SvImJ_T0040680.1 MGP_129S1SvImJ_G0021746.1 mouse_genomes_project 15 20925730 21369301 + MGP_129S1SvImJ_P0040680 Cdh18 protein_coding protein_coding MGP_129S1SvImJ_T0040681.1 MGP_129S1SvImJ_G0021746.1 mouse_genomes_project 15 21078950 21368948 + MGP_129S1SvImJ_P0040681 Cdh18 protein_coding protein_coding MGP_129S1SvImJ_T0040682.1 MGP_129S1SvImJ_G0021746.1 mouse_genomes_project 15 21079112 21368912 + MGP_129S1SvImJ_P0040682 Cdh18 protein_coding protein_coding MGP_129S1SvImJ_T0041308.1 MGP_129S1SvImJ_G0021967.1 mouse_genomes_project 15 75990278 75998704 + MGP_129S1SvImJ_P0041308 Zfp623 protein_coding protein_coding MGP_129S1SvImJ_T0041706.1 MGP_129S1SvImJ_G0022073.1 mouse_genomes_project 15 79620891 79667469 - MGP_129S1SvImJ_P0041706 Tmem184b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0041707.1 MGP_129S1SvImJ_G0022073.1 mouse_genomes_project 15 79622281 79667495 - MGP_129S1SvImJ_P0041707 Tmem184b protein_coding protein_coding MGP_129S1SvImJ_T0041708.1 MGP_129S1SvImJ_G0022073.1 mouse_genomes_project 15 79622281 79667111 - MGP_129S1SvImJ_P0041708 Tmem184b protein_coding protein_coding MGP_129S1SvImJ_T0041807.1 MGP_129S1SvImJ_G0022104.1 mouse_genomes_project 15 81338717 81363181 + MGP_129S1SvImJ_P0041807 Adsl protein_coding protein_coding MGP_129S1SvImJ_T0041808.1 MGP_129S1SvImJ_G0022104.1 mouse_genomes_project 15 81338718 81361242 + MGP_129S1SvImJ_P0041808 Adsl protein_coding protein_coding MGP_129S1SvImJ_T0041809.1 MGP_129S1SvImJ_G0022104.1 mouse_genomes_project 15 81338731 81340334 + Adsl protein_coding retained_intron MGP_129S1SvImJ_T0041810.1 MGP_129S1SvImJ_G0022104.1 mouse_genomes_project 15 81338739 81361353 + MGP_129S1SvImJ_P0041810 Adsl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041811.1 MGP_129S1SvImJ_G0022104.1 mouse_genomes_project 15 81338746 81360982 + MGP_129S1SvImJ_P0041811 Adsl protein_coding protein_coding MGP_129S1SvImJ_T0041812.1 MGP_129S1SvImJ_G0022104.1 mouse_genomes_project 15 81338746 81356723 + MGP_129S1SvImJ_P0041812 Adsl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041813.1 MGP_129S1SvImJ_G0022104.1 mouse_genomes_project 15 81338764 81358357 + MGP_129S1SvImJ_P0041813 Adsl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041814.1 MGP_129S1SvImJ_G0022104.1 mouse_genomes_project 15 81338769 81348095 + Adsl protein_coding retained_intron MGP_129S1SvImJ_T0041815.1 MGP_129S1SvImJ_G0022104.1 mouse_genomes_project 15 81339004 81344495 + MGP_129S1SvImJ_P0041815 Adsl protein_coding protein_coding MGP_129S1SvImJ_T0041816.1 MGP_129S1SvImJ_G0022104.1 mouse_genomes_project 15 81353366 81356598 + Adsl protein_coding retained_intron MGP_129S1SvImJ_T0041817.1 MGP_129S1SvImJ_G0022104.1 mouse_genomes_project 15 81356676 81360989 + MGP_129S1SvImJ_P0041817 Adsl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0006758.1 MGP_129S1SvImJ_G0005585.1 mouse_genomes_project 15 22960250 23009176 - Gm2824 lincRNA lincRNA MGP_129S1SvImJ_T0006759.1 MGP_129S1SvImJ_G0005585.1 mouse_genomes_project 15 22985876 23009119 - Gm2824 lincRNA lincRNA MGP_129S1SvImJ_T0041790.1 MGP_129S1SvImJ_G0022094.1 mouse_genomes_project 15 80449964 80483139 + MGP_129S1SvImJ_P0041790 Tab1 protein_coding protein_coding MGP_129S1SvImJ_T0041943.1 MGP_129S1SvImJ_G0022137.1 mouse_genomes_project 15 82719724 82721990 - MGP_129S1SvImJ_P0041943 Tnfrsf13c protein_coding protein_coding MGP_129S1SvImJ_T0040894.1 MGP_129S1SvImJ_G0021826.1 mouse_genomes_project 15 42074761 42118303 + MGP_129S1SvImJ_P0040894 Emc2 protein_coding protein_coding MGP_129S1SvImJ_T0040631.1 MGP_129S1SvImJ_G0021734.1 mouse_genomes_project 15 9339488 9409158 + MGP_129S1SvImJ_P0040631 Zfr protein_coding protein_coding MGP_129S1SvImJ_T0040632.1 MGP_129S1SvImJ_G0021734.1 mouse_genomes_project 15 9339508 9368803 + MGP_129S1SvImJ_P0040632 Zfr protein_coding protein_coding MGP_129S1SvImJ_T0040633.1 MGP_129S1SvImJ_G0021734.1 mouse_genomes_project 15 9339516 9360589 + MGP_129S1SvImJ_P0040633 Zfr protein_coding protein_coding MGP_129S1SvImJ_T0040634.1 MGP_129S1SvImJ_G0021734.1 mouse_genomes_project 15 9339523 9343988 + Zfr protein_coding processed_transcript MGP_129S1SvImJ_T0040635.1 MGP_129S1SvImJ_G0021734.1 mouse_genomes_project 15 9382193 9388800 + MGP_129S1SvImJ_P0040635 Zfr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040636.1 MGP_129S1SvImJ_G0021734.1 mouse_genomes_project 15 9383114 9407465 + MGP_129S1SvImJ_P0040636 Zfr protein_coding protein_coding MGP_129S1SvImJ_T0040637.1 MGP_129S1SvImJ_G0021734.1 mouse_genomes_project 15 9388738 9407937 + MGP_129S1SvImJ_P0040637 Zfr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040638.1 MGP_129S1SvImJ_G0021734.1 mouse_genomes_project 15 9392854 9394365 + Zfr protein_coding retained_intron MGP_129S1SvImJ_T0040639.1 MGP_129S1SvImJ_G0021734.1 mouse_genomes_project 15 9403122 9407937 + Zfr protein_coding processed_transcript MGP_129S1SvImJ_T0010113.1 MGP_129S1SvImJ_G0008229.1 mouse_genomes_project 15 103670546 103670675 + Gm44460 miRNA miRNA MGP_129S1SvImJ_T0099460.1 MGP_129S1SvImJ_G0037527.1 mouse_genomes_project 15 63491830 63491935 + Gm25628 snRNA snRNA MGP_129S1SvImJ_T0099448.1 MGP_129S1SvImJ_G0037515.1 mouse_genomes_project 15 43561735 43561828 + Gm24768 snRNA snRNA MGP_129S1SvImJ_T0041335.1 MGP_129S1SvImJ_G0021975.1 mouse_genomes_project 15 76137646 76143553 - MGP_129S1SvImJ_P0041335 protein_coding protein_coding MGP_129S1SvImJ_T0017502.1 MGP_129S1SvImJ_G0015305.1 mouse_genomes_project 15 80032637 80034862 + Gm16575 processed_transcript processed_transcript MGP_129S1SvImJ_T0040702.1 MGP_129S1SvImJ_G0021753.1 mouse_genomes_project 15 24321185 24324507 + March11 protein_coding retained_intron MGP_129S1SvImJ_T0040703.1 MGP_129S1SvImJ_G0021753.1 mouse_genomes_project 15 24321201 24426236 + MGP_129S1SvImJ_P0040703 March11 protein_coding protein_coding MGP_129S1SvImJ_T0040704.1 MGP_129S1SvImJ_G0021753.1 mouse_genomes_project 15 24321201 24426236 + MGP_129S1SvImJ_P0040704 March11 protein_coding protein_coding MGP_129S1SvImJ_T0040705.1 MGP_129S1SvImJ_G0021753.1 mouse_genomes_project 15 24404035 24426236 + March11 protein_coding retained_intron MGP_129S1SvImJ_T0040978.1 MGP_129S1SvImJ_G0021858.1 mouse_genomes_project 15 54734761 55009161 - MGP_129S1SvImJ_P0040978 Sntb1 protein_coding protein_coding MGP_129S1SvImJ_T0040979.1 MGP_129S1SvImJ_G0021858.1 mouse_genomes_project 15 54885037 55008934 - MGP_129S1SvImJ_P0040979 Sntb1 protein_coding protein_coding MGP_129S1SvImJ_T0040980.1 MGP_129S1SvImJ_G0021858.1 mouse_genomes_project 15 54886011 55008522 - Sntb1 protein_coding processed_transcript MGP_129S1SvImJ_T0041055.1 MGP_129S1SvImJ_G0021892.1 mouse_genomes_project 15 63214094 63332088 - MGP_129S1SvImJ_P0041055 protein_coding protein_coding MGP_129S1SvImJ_T0041056.1 MGP_129S1SvImJ_G0021892.1 mouse_genomes_project 15 63214094 63321084 - MGP_129S1SvImJ_P0041056 protein_coding protein_coding MGP_129S1SvImJ_T0041854.1 MGP_129S1SvImJ_G0022113.1 mouse_genomes_project 15 81889237 81904867 + MGP_129S1SvImJ_P0041854 Rbx1 protein_coding protein_coding MGP_129S1SvImJ_T0042732.1 MGP_129S1SvImJ_G0022403.1 mouse_genomes_project 15 104358400 104371746 + MGP_129S1SvImJ_P0042732 Zfp740 protein_coding protein_coding MGP_129S1SvImJ_T0042733.1 MGP_129S1SvImJ_G0022403.1 mouse_genomes_project 15 104358411 104371739 + MGP_129S1SvImJ_P0042733 Zfp740 protein_coding protein_coding MGP_129S1SvImJ_T0042734.1 MGP_129S1SvImJ_G0022403.1 mouse_genomes_project 15 104358443 104364719 + MGP_129S1SvImJ_P0042734 Zfp740 protein_coding protein_coding MGP_129S1SvImJ_T0042735.1 MGP_129S1SvImJ_G0022403.1 mouse_genomes_project 15 104358461 104365241 + MGP_129S1SvImJ_P0042735 Zfp740 protein_coding protein_coding MGP_129S1SvImJ_T0042736.1 MGP_129S1SvImJ_G0022403.1 mouse_genomes_project 15 104359361 104371747 + MGP_129S1SvImJ_P0042736 Zfp740 protein_coding protein_coding MGP_129S1SvImJ_T0042737.1 MGP_129S1SvImJ_G0022403.1 mouse_genomes_project 15 104359498 104365155 + MGP_129S1SvImJ_P0042737 Zfp740 protein_coding protein_coding MGP_129S1SvImJ_T0042738.1 MGP_129S1SvImJ_G0022403.1 mouse_genomes_project 15 104359532 104365143 + MGP_129S1SvImJ_P0042738 Zfp740 protein_coding protein_coding MGP_129S1SvImJ_T0042739.1 MGP_129S1SvImJ_G0022403.1 mouse_genomes_project 15 104363994 104365025 + Zfp740 protein_coding retained_intron MGP_129S1SvImJ_T0042740.1 MGP_129S1SvImJ_G0022403.1 mouse_genomes_project 15 104364638 104371742 + Zfp740 protein_coding retained_intron MGP_129S1SvImJ_T0099479.1 MGP_129S1SvImJ_G0037546.1 mouse_genomes_project 15 91289964 91290071 - Gm24415 snRNA snRNA MGP_129S1SvImJ_T0042705.1 MGP_129S1SvImJ_G0022382.1 mouse_genomes_project 15 103795909 103806934 - MGP_129S1SvImJ_P0042705 protein_coding protein_coding MGP_129S1SvImJ_T0040618.1 MGP_129S1SvImJ_G0021725.1 mouse_genomes_project 15 7714394 7865198 - MGP_129S1SvImJ_P0040618 Rai14 protein_coding protein_coding MGP_129S1SvImJ_T0040619.1 MGP_129S1SvImJ_G0021725.1 mouse_genomes_project 15 7714394 7867454 - MGP_129S1SvImJ_P0040619 Rai14 protein_coding protein_coding MGP_129S1SvImJ_T0041686.1 MGP_129S1SvImJ_G0022069.1 mouse_genomes_project 15 79507710 79511458 - MGP_129S1SvImJ_P0041686 Slc16a8 protein_coding protein_coding MGP_129S1SvImJ_T0042616.1 MGP_129S1SvImJ_G0022352.1 mouse_genomes_project 15 102432043 102442320 + MGP_129S1SvImJ_P0042616 Letmd1 protein_coding protein_coding MGP_129S1SvImJ_T0040727.1 MGP_129S1SvImJ_G0021766.1 mouse_genomes_project 15 29694394 29781756 - MGP_129S1SvImJ_P0040727 March6 protein_coding protein_coding MGP_129S1SvImJ_T0040713.1 MGP_129S1SvImJ_G0021759.1 mouse_genomes_project 15 26136358 26136729 - MGP_129S1SvImJ_P0040713 Gm10076 protein_coding protein_coding MGP_129S1SvImJ_T0006779.1 MGP_129S1SvImJ_G0005602.1 mouse_genomes_project 15 61385175 61607128 + lincRNA lincRNA MGP_129S1SvImJ_T0006780.1 MGP_129S1SvImJ_G0005602.1 mouse_genomes_project 15 61385227 61618359 + lincRNA lincRNA MGP_129S1SvImJ_T0006781.1 MGP_129S1SvImJ_G0005602.1 mouse_genomes_project 15 61385236 61607124 + lincRNA lincRNA MGP_129S1SvImJ_T0006782.1 MGP_129S1SvImJ_G0005602.1 mouse_genomes_project 15 61385239 61742125 + lincRNA lincRNA MGP_129S1SvImJ_T0006783.1 MGP_129S1SvImJ_G0005602.1 mouse_genomes_project 15 61385250 61608573 + lincRNA lincRNA MGP_129S1SvImJ_T0006784.1 MGP_129S1SvImJ_G0005602.1 mouse_genomes_project 15 61386446 61606823 + lincRNA lincRNA MGP_129S1SvImJ_T0006785.1 MGP_129S1SvImJ_G0005602.1 mouse_genomes_project 15 61449800 61460422 + lincRNA lincRNA MGP_129S1SvImJ_T0006786.1 MGP_129S1SvImJ_G0005602.1 mouse_genomes_project 15 61537304 61608575 + lincRNA lincRNA MGP_129S1SvImJ_T0006787.1 MGP_129S1SvImJ_G0005602.1 mouse_genomes_project 15 61578111 61607126 + lincRNA lincRNA MGP_129S1SvImJ_T0006788.1 MGP_129S1SvImJ_G0005602.1 mouse_genomes_project 15 61582491 61600105 + lincRNA lincRNA MGP_129S1SvImJ_T0042296.1 MGP_129S1SvImJ_G0022248.1 mouse_genomes_project 15 92556928 92881982 - MGP_129S1SvImJ_P0042296 Slc2a13 protein_coding protein_coding MGP_129S1SvImJ_T0042297.1 MGP_129S1SvImJ_G0022248.1 mouse_genomes_project 15 92694709 92711340 - Slc2a13 protein_coding processed_transcript MGP_129S1SvImJ_T0042298.1 MGP_129S1SvImJ_G0022248.1 mouse_genomes_project 15 92850975 92881915 - Slc2a13 protein_coding processed_transcript MGP_129S1SvImJ_T0041591.1 MGP_129S1SvImJ_G0022041.1 mouse_genomes_project 15 78593544 78599828 - MGP_129S1SvImJ_P0041591 Tst protein_coding protein_coding MGP_129S1SvImJ_T0011414.1 MGP_129S1SvImJ_G0009530.1 mouse_genomes_project 15 87102754 87103052 + Gm24011 misc_RNA misc_RNA MGP_129S1SvImJ_T0042068.1 MGP_129S1SvImJ_G0022181.1 mouse_genomes_project 15 85534608 85579938 + MGP_129S1SvImJ_P0042068 Arhgap8 protein_coding protein_coding MGP_129S1SvImJ_T0042069.1 MGP_129S1SvImJ_G0022181.1 mouse_genomes_project 15 85534608 85579938 + MGP_129S1SvImJ_P0042069 Arhgap8 protein_coding protein_coding MGP_129S1SvImJ_T0042070.1 MGP_129S1SvImJ_G0022181.1 mouse_genomes_project 15 85534639 85567036 + Arhgap8 protein_coding retained_intron MGP_129S1SvImJ_T0042071.1 MGP_129S1SvImJ_G0022181.1 mouse_genomes_project 15 85547401 85579935 + MGP_129S1SvImJ_P0042071 Arhgap8 protein_coding protein_coding MGP_129S1SvImJ_T0042072.1 MGP_129S1SvImJ_G0022181.1 mouse_genomes_project 15 85556584 85573934 + Arhgap8 protein_coding processed_transcript MGP_129S1SvImJ_T0042073.1 MGP_129S1SvImJ_G0022181.1 mouse_genomes_project 15 85577607 85579671 + Arhgap8 protein_coding retained_intron MGP_129S1SvImJ_T0013110.1 MGP_129S1SvImJ_G0011199.1 mouse_genomes_project 15 76019547 76020823 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0042719.1 MGP_129S1SvImJ_G0022395.1 mouse_genomes_project 15 104130493 104141556 - MGP_129S1SvImJ_P0042719 Krt8 protein_coding protein_coding MGP_129S1SvImJ_T0010089.1 MGP_129S1SvImJ_G0008205.1 mouse_genomes_project 15 83116216 83116276 - Gm27825 miRNA miRNA MGP_129S1SvImJ_T0100753.1 MGP_129S1SvImJ_G0038820.1 mouse_genomes_project 15 71459743 71459921 + Gm22519 snoRNA snoRNA MGP_129S1SvImJ_T0013101.1 MGP_129S1SvImJ_G0011190.1 mouse_genomes_project 15 59253843 59254850 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0041623.1 MGP_129S1SvImJ_G0022055.1 mouse_genomes_project 15 79107299 79128934 + MGP_129S1SvImJ_P0041623 Gga1 protein_coding protein_coding MGP_129S1SvImJ_T0042828.1 MGP_129S1SvImJ_G0022423.1 mouse_genomes_project 15 104917021 104932485 - MGP_129S1SvImJ_P0042828 Calcoco1 protein_coding protein_coding MGP_129S1SvImJ_T0042829.1 MGP_129S1SvImJ_G0022423.1 mouse_genomes_project 15 104917214 104920145 - MGP_129S1SvImJ_P0042829 Calcoco1 protein_coding protein_coding MGP_129S1SvImJ_T0042830.1 MGP_129S1SvImJ_G0022423.1 mouse_genomes_project 15 104917827 104932438 - MGP_129S1SvImJ_P0042830 Calcoco1 protein_coding protein_coding MGP_129S1SvImJ_T0042831.1 MGP_129S1SvImJ_G0022423.1 mouse_genomes_project 15 104920532 104926104 - Calcoco1 protein_coding retained_intron MGP_129S1SvImJ_T0041314.1 MGP_129S1SvImJ_G0021969.1 mouse_genomes_project 15 76032130 76034714 - MGP_129S1SvImJ_P0041314 Ccdc166 protein_coding protein_coding MGP_129S1SvImJ_T0041315.1 MGP_129S1SvImJ_G0021969.1 mouse_genomes_project 15 76033025 76034701 - MGP_129S1SvImJ_P0041315 Ccdc166 protein_coding protein_coding MGP_129S1SvImJ_T0003664.1 MGP_129S1SvImJ_G0003316.1 mouse_genomes_project 15 102682124 102691253 + Galnt6os antisense antisense MGP_129S1SvImJ_T0099442.1 MGP_129S1SvImJ_G0037509.1 mouse_genomes_project 15 28822911 28822974 + Gm24487 snRNA snRNA MGP_129S1SvImJ_T0042354.1 MGP_129S1SvImJ_G0022264.1 mouse_genomes_project 15 97142170 97176940 - MGP_129S1SvImJ_P0042354 Dbx2 protein_coding protein_coding MGP_129S1SvImJ_T0013103.1 MGP_129S1SvImJ_G0011192.1 mouse_genomes_project 15 62357727 62358897 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0041220.1 MGP_129S1SvImJ_G0021937.1 mouse_genomes_project 15 74548002 74549574 - MGP_129S1SvImJ_P0041220 Ly6d protein_coding protein_coding MGP_129S1SvImJ_T0042080.1 MGP_129S1SvImJ_G0022183.1 mouse_genomes_project 15 85720764 85731569 - MGP_129S1SvImJ_P0042080 Gm29666 protein_coding protein_coding MGP_129S1SvImJ_T0042122.1 MGP_129S1SvImJ_G0022200.1 mouse_genomes_project 15 86831883 86979110 - MGP_129S1SvImJ_P0042122 Celsr1 protein_coding protein_coding MGP_129S1SvImJ_T0042123.1 MGP_129S1SvImJ_G0022200.1 mouse_genomes_project 15 86832052 86979103 - MGP_129S1SvImJ_P0042123 Celsr1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0098833.1 MGP_129S1SvImJ_G0036914.1 mouse_genomes_project 15 36230830 36233045 - Gm15940 sense_intronic sense_intronic MGP_129S1SvImJ_T0041225.1 MGP_129S1SvImJ_G0021940.1 mouse_genomes_project 15 74614442 74619217 + MGP_129S1SvImJ_P0041225 protein_coding protein_coding MGP_129S1SvImJ_T0042451.1 MGP_129S1SvImJ_G0022297.1 mouse_genomes_project 15 100180840 100181898 + MGP_129S1SvImJ_P0042451 Olfr281 protein_coding protein_coding MGP_129S1SvImJ_T0041211.1 MGP_129S1SvImJ_G0021932.1 mouse_genomes_project 15 74503664 74507097 + MGP_129S1SvImJ_P0041211 Them6 protein_coding protein_coding MGP_129S1SvImJ_T0041657.1 MGP_129S1SvImJ_G0022064.1 mouse_genomes_project 15 79366402 79394069 + MGP_129S1SvImJ_P0041657 Micall1 protein_coding protein_coding MGP_129S1SvImJ_T0041673.1 MGP_129S1SvImJ_G0022067.1 mouse_genomes_project 15 79412082 79421651 - MGP_129S1SvImJ_P0041673 Sox10 protein_coding protein_coding MGP_129S1SvImJ_T0042358.1 MGP_129S1SvImJ_G0022267.1 mouse_genomes_project 15 97359181 97364560 - MGP_129S1SvImJ_P0042358 Gm17546 protein_coding protein_coding MGP_129S1SvImJ_T0017511.1 MGP_129S1SvImJ_G0015309.1 mouse_genomes_project 15 93224235 93250590 + processed_transcript processed_transcript MGP_129S1SvImJ_T0017512.1 MGP_129S1SvImJ_G0015309.1 mouse_genomes_project 15 93233093 93264754 + processed_transcript processed_transcript MGP_129S1SvImJ_T0013105.1 MGP_129S1SvImJ_G0011194.1 mouse_genomes_project 15 68455124 68456266 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0040513.1 MGP_129S1SvImJ_G0021698.1 mouse_genomes_project 15 3702124 3799123 + MGP_129S1SvImJ_P0040513 Rictor protein_coding protein_coding MGP_129S1SvImJ_T0013106.1 MGP_129S1SvImJ_G0011195.1 mouse_genomes_project 15 73325778 73330123 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0042146.1 MGP_129S1SvImJ_G0022209.1 mouse_genomes_project 15 89978019 89985062 + MGP_129S1SvImJ_P0042146 Creld2 protein_coding protein_coding MGP_129S1SvImJ_T0100742.1 MGP_129S1SvImJ_G0038809.1 mouse_genomes_project 15 43568192 43568335 + Gm23343 snoRNA snoRNA MGP_129S1SvImJ_T0041729.1 MGP_129S1SvImJ_G0022080.1 mouse_genomes_project 15 79956863 79967441 + MGP_129S1SvImJ_P0041729 Cby1 protein_coding protein_coding MGP_129S1SvImJ_T0100746.1 MGP_129S1SvImJ_G0038813.1 mouse_genomes_project 15 57198266 57198402 - Gm22299 snoRNA snoRNA MGP_129S1SvImJ_T0041750.1 MGP_129S1SvImJ_G0022087.1 mouse_genomes_project 15 80086901 80133730 - MGP_129S1SvImJ_P0041750 Npcd protein_coding protein_coding MGP_129S1SvImJ_T0041751.1 MGP_129S1SvImJ_G0022087.1 mouse_genomes_project 15 80086901 80133730 - MGP_129S1SvImJ_P0041751 Npcd protein_coding protein_coding MGP_129S1SvImJ_T0013077.1 MGP_129S1SvImJ_G0011166.1 mouse_genomes_project 15 10713316 10714135 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0042516.1 MGP_129S1SvImJ_G0022327.1 mouse_genomes_project 15 101094518 101115879 - MGP_129S1SvImJ_P0042516 Fam186b protein_coding protein_coding MGP_129S1SvImJ_T0006792.1 MGP_129S1SvImJ_G0005606.1 mouse_genomes_project 15 78108997 78114450 + Gm17638 lincRNA lincRNA MGP_129S1SvImJ_T0010112.1 MGP_129S1SvImJ_G0008228.1 mouse_genomes_project 15 103657633 103657771 + Gm44393 miRNA miRNA MGP_129S1SvImJ_T0042008.1 MGP_129S1SvImJ_G0022161.1 mouse_genomes_project 15 83896235 83931806 - MGP_129S1SvImJ_P0042008 A4galt protein_coding protein_coding MGP_129S1SvImJ_T0042009.1 MGP_129S1SvImJ_G0022161.1 mouse_genomes_project 15 83896235 83931763 - MGP_129S1SvImJ_P0042009 A4galt protein_coding protein_coding MGP_129S1SvImJ_T0102261.1 MGP_129S1SvImJ_G0040095.1 mouse_genomes_project 15 75242327 75251093 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0040685.1 MGP_129S1SvImJ_G0021749.1 mouse_genomes_project 15 23400559 23401212 + MGP_129S1SvImJ_P0040685 Gm5468 protein_coding protein_coding MGP_129S1SvImJ_T0041149.1 MGP_129S1SvImJ_G0021915.1 mouse_genomes_project 15 71460342 71707404 - MGP_129S1SvImJ_P0041149 Col22a1 protein_coding protein_coding MGP_129S1SvImJ_T0041150.1 MGP_129S1SvImJ_G0021915.1 mouse_genomes_project 15 71535436 71565355 - MGP_129S1SvImJ_P0041150 Col22a1 protein_coding protein_coding MGP_129S1SvImJ_T0041151.1 MGP_129S1SvImJ_G0021915.1 mouse_genomes_project 15 71572462 71624702 - Col22a1 protein_coding processed_transcript MGP_129S1SvImJ_T0041152.1 MGP_129S1SvImJ_G0021915.1 mouse_genomes_project 15 71590651 71624727 - MGP_129S1SvImJ_P0041152 Col22a1 protein_coding protein_coding MGP_129S1SvImJ_T0099450.1 MGP_129S1SvImJ_G0037517.1 mouse_genomes_project 15 47362484 47362617 + Gm25007 snRNA snRNA MGP_129S1SvImJ_T0040944.1 MGP_129S1SvImJ_G0021846.1 mouse_genomes_project 15 53291390 53323857 - MGP_129S1SvImJ_P0040944 Tnfrsf11b protein_coding protein_coding MGP_129S1SvImJ_T0040905.1 MGP_129S1SvImJ_G0021833.1 mouse_genomes_project 15 43293773 43404181 - MGP_129S1SvImJ_P0040905 Sybu protein_coding protein_coding MGP_129S1SvImJ_T0040906.1 MGP_129S1SvImJ_G0021833.1 mouse_genomes_project 15 43293773 43404181 - MGP_129S1SvImJ_P0040906 Sybu protein_coding protein_coding MGP_129S1SvImJ_T0040907.1 MGP_129S1SvImJ_G0021833.1 mouse_genomes_project 15 43293773 43369377 - MGP_129S1SvImJ_P0040907 Sybu protein_coding protein_coding MGP_129S1SvImJ_T0099482.1 MGP_129S1SvImJ_G0037549.1 mouse_genomes_project 15 98271076 98271184 + Gm22045 snRNA snRNA MGP_129S1SvImJ_T0042709.1 MGP_129S1SvImJ_G0022386.1 mouse_genomes_project 15 103908244 103920321 - MGP_129S1SvImJ_P0042709 Krt72 protein_coding protein_coding MGP_129S1SvImJ_T0042710.1 MGP_129S1SvImJ_G0022386.1 mouse_genomes_project 15 103908405 103910766 - Krt72 protein_coding processed_transcript MGP_129S1SvImJ_T0013109.1 MGP_129S1SvImJ_G0011198.1 mouse_genomes_project 15 75894577 75895987 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0042878.1 MGP_129S1SvImJ_G0022444.1 mouse_genomes_project 15 105773546 105800351 + MGP_129S1SvImJ_P0042878 Pde1b protein_coding protein_coding MGP_129S1SvImJ_T0040707.1 MGP_129S1SvImJ_G0021755.1 mouse_genomes_project 15 25534466 25665299 + MGP_129S1SvImJ_P0040707 Ank protein_coding protein_coding MGP_129S1SvImJ_T0040708.1 MGP_129S1SvImJ_G0021755.1 mouse_genomes_project 15 25641849 25663553 + Ank protein_coding retained_intron MGP_129S1SvImJ_T0041027.1 MGP_129S1SvImJ_G0021879.1 mouse_genomes_project 15 58097395 58137237 - MGP_129S1SvImJ_P0041027 Tatdn1 protein_coding protein_coding MGP_129S1SvImJ_T0041028.1 MGP_129S1SvImJ_G0021879.1 mouse_genomes_project 15 58108224 58137201 - MGP_129S1SvImJ_P0041028 Tatdn1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042373.1 MGP_129S1SvImJ_G0022276.1 mouse_genomes_project 15 99344275 99375777 - MGP_129S1SvImJ_P0042373 Rpap3 protein_coding protein_coding MGP_129S1SvImJ_T0041674.1 MGP_129S1SvImJ_G0022068.1 mouse_genomes_project 15 79486240 79506181 + MGP_129S1SvImJ_P0041674 Pick1 protein_coding protein_coding MGP_129S1SvImJ_T0041675.1 MGP_129S1SvImJ_G0022068.1 mouse_genomes_project 15 79486449 79506163 + MGP_129S1SvImJ_P0041675 Pick1 protein_coding protein_coding MGP_129S1SvImJ_T0041676.1 MGP_129S1SvImJ_G0022068.1 mouse_genomes_project 15 79486458 79513378 + MGP_129S1SvImJ_P0041676 Pick1 protein_coding protein_coding MGP_129S1SvImJ_T0041677.1 MGP_129S1SvImJ_G0022068.1 mouse_genomes_project 15 79486478 79504655 + Pick1 protein_coding retained_intron MGP_129S1SvImJ_T0041678.1 MGP_129S1SvImJ_G0022068.1 mouse_genomes_project 15 79486483 79504655 + Pick1 protein_coding retained_intron MGP_129S1SvImJ_T0041679.1 MGP_129S1SvImJ_G0022068.1 mouse_genomes_project 15 79486525 79491260 + Pick1 protein_coding processed_transcript MGP_129S1SvImJ_T0041680.1 MGP_129S1SvImJ_G0022068.1 mouse_genomes_project 15 79486572 79498228 + Pick1 protein_coding retained_intron MGP_129S1SvImJ_T0041681.1 MGP_129S1SvImJ_G0022068.1 mouse_genomes_project 15 79486769 79506026 + MGP_129S1SvImJ_P0041681 Pick1 protein_coding protein_coding MGP_129S1SvImJ_T0041682.1 MGP_129S1SvImJ_G0022068.1 mouse_genomes_project 15 79499743 79504338 + Pick1 protein_coding processed_transcript MGP_129S1SvImJ_T0041683.1 MGP_129S1SvImJ_G0022068.1 mouse_genomes_project 15 79501586 79504314 + Pick1 protein_coding processed_transcript MGP_129S1SvImJ_T0041684.1 MGP_129S1SvImJ_G0022068.1 mouse_genomes_project 15 79501983 79504426 + Pick1 protein_coding processed_transcript MGP_129S1SvImJ_T0041685.1 MGP_129S1SvImJ_G0022068.1 mouse_genomes_project 15 79503048 79506163 + Pick1 protein_coding processed_transcript MGP_129S1SvImJ_T0100744.1 MGP_129S1SvImJ_G0038811.1 mouse_genomes_project 15 51487759 51487883 + Gm23267 snoRNA snoRNA MGP_129S1SvImJ_T0041526.1 MGP_129S1SvImJ_G0022016.1 mouse_genomes_project 15 77022697 77024945 + MGP_129S1SvImJ_P0041526 Rpl8 protein_coding protein_coding MGP_129S1SvImJ_T0040720.1 MGP_129S1SvImJ_G0021763.1 mouse_genomes_project 15 29498392 29498809 + MGP_129S1SvImJ_P0040720 Fam136b-ps protein_coding protein_coding MGP_129S1SvImJ_T0040908.1 MGP_129S1SvImJ_G0021834.1 mouse_genomes_project 15 43728966 43737604 - MGP_129S1SvImJ_P0040908 Kcnv1 protein_coding protein_coding MGP_129S1SvImJ_T0042286.1 MGP_129S1SvImJ_G0022245.1 mouse_genomes_project 15 92221316 92350289 - MGP_129S1SvImJ_P0042286 Kif21a protein_coding protein_coding MGP_129S1SvImJ_T0042287.1 MGP_129S1SvImJ_G0022245.1 mouse_genomes_project 15 92221316 92350289 - MGP_129S1SvImJ_P0042287 Kif21a protein_coding protein_coding MGP_129S1SvImJ_T0042288.1 MGP_129S1SvImJ_G0022245.1 mouse_genomes_project 15 92221316 92350289 - MGP_129S1SvImJ_P0042288 Kif21a protein_coding protein_coding MGP_129S1SvImJ_T0042289.1 MGP_129S1SvImJ_G0022245.1 mouse_genomes_project 15 92221316 92350289 - MGP_129S1SvImJ_P0042289 Kif21a protein_coding protein_coding MGP_129S1SvImJ_T0042290.1 MGP_129S1SvImJ_G0022245.1 mouse_genomes_project 15 92221316 92350289 - MGP_129S1SvImJ_P0042290 Kif21a protein_coding protein_coding MGP_129S1SvImJ_T0042291.1 MGP_129S1SvImJ_G0022245.1 mouse_genomes_project 15 92221318 92350043 - MGP_129S1SvImJ_P0042291 Kif21a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0041577.1 MGP_129S1SvImJ_G0022035.1 mouse_genomes_project 15 78145984 78279198 - MGP_129S1SvImJ_P0041577 Cacng2 protein_coding protein_coding MGP_129S1SvImJ_T0041250.1 MGP_129S1SvImJ_G0021947.1 mouse_genomes_project 15 74821802 75371262 - MGP_129S1SvImJ_P0041250 Ly6a protein_coding protein_coding MGP_129S1SvImJ_T0041257.1 MGP_129S1SvImJ_G0021947.1 mouse_genomes_project 15 75371161 75371459 - MGP_129S1SvImJ_P0041257 Ly6a protein_coding protein_coding MGP_129S1SvImJ_T0040943.1 MGP_129S1SvImJ_G0021845.1 mouse_genomes_project 15 52919198 52920879 + MGP_129S1SvImJ_P0040943 Gm7489 protein_coding protein_coding MGP_129S1SvImJ_T0017486.1 MGP_129S1SvImJ_G0015295.1 mouse_genomes_project 15 60078766 60085132 + 9930014A18Rik processed_transcript antisense MGP_129S1SvImJ_T0017487.1 MGP_129S1SvImJ_G0015295.1 mouse_genomes_project 15 60079446 60082103 + 9930014A18Rik processed_transcript TEC MGP_129S1SvImJ_T0017488.1 MGP_129S1SvImJ_G0015295.1 mouse_genomes_project 15 60079895 60080433 + 9930014A18Rik processed_transcript antisense MGP_129S1SvImJ_T0017489.1 MGP_129S1SvImJ_G0015295.1 mouse_genomes_project 15 60080834 60088275 + 9930014A18Rik processed_transcript antisense MGP_129S1SvImJ_T0011406.1 MGP_129S1SvImJ_G0009522.1 mouse_genomes_project 15 41807364 41807660 - Gm22037 misc_RNA misc_RNA MGP_129S1SvImJ_T0003625.1 MGP_129S1SvImJ_G0003285.1 mouse_genomes_project 15 56877012 56879102 - 9330154K18Rik antisense antisense MGP_129S1SvImJ_T0042351.1 MGP_129S1SvImJ_G0022262.1 mouse_genomes_project 15 96096818 96589349 + MGP_129S1SvImJ_P0042351 Tmem117 protein_coding protein_coding MGP_129S1SvImJ_T0102256.1 MGP_129S1SvImJ_G0040090.1 mouse_genomes_project 15 75091145 75091359 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0041005.1 MGP_129S1SvImJ_G0021867.1 mouse_genomes_project 15 57203769 57235507 - MGP_129S1SvImJ_P0041005 Zhx1 protein_coding protein_coding MGP_129S1SvImJ_T0041006.1 MGP_129S1SvImJ_G0021867.1 mouse_genomes_project 15 57203769 57235751 - MGP_129S1SvImJ_P0041006 Zhx1 protein_coding protein_coding MGP_129S1SvImJ_T0041007.1 MGP_129S1SvImJ_G0021867.1 mouse_genomes_project 15 57204071 57235731 - MGP_129S1SvImJ_P0041007 Zhx1 protein_coding protein_coding MGP_129S1SvImJ_T0041010.1 MGP_129S1SvImJ_G0021867.1 mouse_genomes_project 15 57209746 57235476 - MGP_129S1SvImJ_P0041010 Zhx1 protein_coding protein_coding MGP_129S1SvImJ_T0041011.1 MGP_129S1SvImJ_G0021867.1 mouse_genomes_project 15 57211680 57235625 - Zhx1 protein_coding retained_intron MGP_129S1SvImJ_T0041012.1 MGP_129S1SvImJ_G0021867.1 mouse_genomes_project 15 57227921 57235803 - Zhx1 protein_coding retained_intron MGP_129S1SvImJ_T0013114.1 MGP_129S1SvImJ_G0011203.1 mouse_genomes_project 15 79976738 79987568 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0040743.1 MGP_129S1SvImJ_G0021773.1 mouse_genomes_project 15 31391958 31902351 + MGP_129S1SvImJ_P0040743 Cpq protein_coding protein_coding MGP_129S1SvImJ_T0042074.1 MGP_129S1SvImJ_G0022182.1 mouse_genomes_project 15 85592890 85664066 - MGP_129S1SvImJ_P0042074 Phf21b protein_coding protein_coding MGP_129S1SvImJ_T0042075.1 MGP_129S1SvImJ_G0022182.1 mouse_genomes_project 15 85592891 85594961 - Phf21b protein_coding processed_transcript MGP_129S1SvImJ_T0042076.1 MGP_129S1SvImJ_G0022182.1 mouse_genomes_project 15 85592893 85665005 - MGP_129S1SvImJ_P0042076 Phf21b protein_coding protein_coding MGP_129S1SvImJ_T0042077.1 MGP_129S1SvImJ_G0022182.1 mouse_genomes_project 15 85593642 85664707 - MGP_129S1SvImJ_P0042077 Phf21b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042078.1 MGP_129S1SvImJ_G0022182.1 mouse_genomes_project 15 85594882 85598960 - Phf21b protein_coding retained_intron MGP_129S1SvImJ_T0042079.1 MGP_129S1SvImJ_G0022182.1 mouse_genomes_project 15 85602076 85611005 - Phf21b protein_coding retained_intron MGP_129S1SvImJ_T0013081.1 MGP_129S1SvImJ_G0011170.1 mouse_genomes_project 15 15750198 15751072 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010111.1 MGP_129S1SvImJ_G0008227.1 mouse_genomes_project 15 103424523 103424606 + Mir1941 miRNA miRNA MGP_129S1SvImJ_T0042191.1 MGP_129S1SvImJ_G0022220.1 mouse_genomes_project 15 90317123 90324238 - MGP_129S1SvImJ_P0042191 Mapk11 protein_coding protein_coding MGP_129S1SvImJ_T0006768.1 MGP_129S1SvImJ_G0005594.1 mouse_genomes_project 15 38967828 38983753 - Gm16294 lincRNA lincRNA MGP_129S1SvImJ_T0041968.1 MGP_129S1SvImJ_G0022152.1 mouse_genomes_project 15 83249653 83252559 - MGP_129S1SvImJ_P0041968 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0010049.1 MGP_129S1SvImJ_G0008165.1 mouse_genomes_project 15 23962364 23962425 + Mir7212 miRNA miRNA MGP_129S1SvImJ_T0042836.1 MGP_129S1SvImJ_G0022428.1 mouse_genomes_project 15 105202996 105250979 + Hoxc5 protein_coding processed_transcript MGP_129S1SvImJ_T0042844.1 MGP_129S1SvImJ_G0022428.1 mouse_genomes_project 15 105249117 105252732 + MGP_129S1SvImJ_P0042844 Hoxc5 protein_coding protein_coding MGP_129S1SvImJ_T0000965.1 MGP_129S1SvImJ_G0000897.1 mouse_genomes_project 15 67885610 67890537 - TEC TEC MGP_129S1SvImJ_T0042618.1 MGP_129S1SvImJ_G0022354.1 mouse_genomes_project 15 102467803 102524033 - MGP_129S1SvImJ_P0042618 Tfcp2 protein_coding protein_coding MGP_129S1SvImJ_T0042619.1 MGP_129S1SvImJ_G0022354.1 mouse_genomes_project 15 102469402 102523471 - MGP_129S1SvImJ_P0042619 Tfcp2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040896.1 MGP_129S1SvImJ_G0021828.1 mouse_genomes_project 15 42789750 42834247 + MGP_129S1SvImJ_P0040896 Trhr protein_coding protein_coding MGP_129S1SvImJ_T0040897.1 MGP_129S1SvImJ_G0021828.1 mouse_genomes_project 15 42789848 42832502 + MGP_129S1SvImJ_P0040897 Trhr protein_coding protein_coding MGP_129S1SvImJ_T0098509.1 MGP_129S1SvImJ_G0036594.1 mouse_genomes_project 15 79993144 79993268 + n-R5s40 rRNA rRNA MGP_129S1SvImJ_T0013086.1 MGP_129S1SvImJ_G0011175.1 mouse_genomes_project 15 35601114 35602554 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000956.1 MGP_129S1SvImJ_G0000888.1 mouse_genomes_project 15 3995911 4002383 + TEC TEC MGP_129S1SvImJ_T0042343.1 MGP_129S1SvImJ_G0022260.1 mouse_genomes_project 15 96013870 96039412 + MGP_129S1SvImJ_P0042343 Irak4 protein_coding protein_coding MGP_129S1SvImJ_T0042344.1 MGP_129S1SvImJ_G0022260.1 mouse_genomes_project 15 96013880 96027109 + Irak4 protein_coding retained_intron MGP_129S1SvImJ_T0042345.1 MGP_129S1SvImJ_G0022260.1 mouse_genomes_project 15 96013899 96053592 + MGP_129S1SvImJ_P0042345 Irak4 protein_coding protein_coding MGP_129S1SvImJ_T0042346.1 MGP_129S1SvImJ_G0022260.1 mouse_genomes_project 15 96013937 96040784 + MGP_129S1SvImJ_P0042346 Irak4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042707.1 MGP_129S1SvImJ_G0022384.1 mouse_genomes_project 15 103862008 103871047 - MGP_129S1SvImJ_P0042707 Krt71 protein_coding protein_coding MGP_129S1SvImJ_T0042876.1 MGP_129S1SvImJ_G0022442.1 mouse_genomes_project 15 105706055 105716827 - MGP_129S1SvImJ_P0042876 BC048502 protein_coding protein_coding MGP_129S1SvImJ_T0042701.1 MGP_129S1SvImJ_G0022378.1 mouse_genomes_project 15 103641638 103651179 - MGP_129S1SvImJ_P0042701 Krt82 protein_coding protein_coding MGP_129S1SvImJ_T0041524.1 MGP_129S1SvImJ_G0022015.1 mouse_genomes_project 15 77018536 77019932 + MGP_129S1SvImJ_P0041524 Commd5 protein_coding protein_coding MGP_129S1SvImJ_T0041525.1 MGP_129S1SvImJ_G0022015.1 mouse_genomes_project 15 77018562 77019818 + MGP_129S1SvImJ_P0041525 Commd5 protein_coding protein_coding MGP_129S1SvImJ_T0041734.1 MGP_129S1SvImJ_G0022084.1 mouse_genomes_project 15 80017865 80035520 - Sun2 protein_coding retained_intron MGP_129S1SvImJ_T0041735.1 MGP_129S1SvImJ_G0022084.1 mouse_genomes_project 15 80017865 80035598 - MGP_129S1SvImJ_P0041735 Sun2 protein_coding protein_coding MGP_129S1SvImJ_T0041736.1 MGP_129S1SvImJ_G0022084.1 mouse_genomes_project 15 80017866 80035568 - MGP_129S1SvImJ_P0041736 Sun2 protein_coding protein_coding MGP_129S1SvImJ_T0041737.1 MGP_129S1SvImJ_G0022084.1 mouse_genomes_project 15 80017868 80035600 - MGP_129S1SvImJ_P0041737 Sun2 protein_coding protein_coding MGP_129S1SvImJ_T0041738.1 MGP_129S1SvImJ_G0022084.1 mouse_genomes_project 15 80023409 80035568 - Sun2 protein_coding retained_intron MGP_129S1SvImJ_T0041739.1 MGP_129S1SvImJ_G0022084.1 mouse_genomes_project 15 80027299 80029143 - Sun2 protein_coding retained_intron MGP_129S1SvImJ_T0041740.1 MGP_129S1SvImJ_G0022084.1 mouse_genomes_project 15 80031713 80035179 - MGP_129S1SvImJ_P0041740 Sun2 protein_coding protein_coding MGP_129S1SvImJ_T0041741.1 MGP_129S1SvImJ_G0022084.1 mouse_genomes_project 15 80032795 80035167 - MGP_129S1SvImJ_P0041741 Sun2 protein_coding protein_coding MGP_129S1SvImJ_T0041742.1 MGP_129S1SvImJ_G0022084.1 mouse_genomes_project 15 80032902 80035156 - MGP_129S1SvImJ_P0041742 Sun2 protein_coding protein_coding MGP_129S1SvImJ_T0040981.1 MGP_129S1SvImJ_G0021859.1 mouse_genomes_project 15 55808708 55839837 - MGP_129S1SvImJ_P0040981 Has2 protein_coding protein_coding MGP_129S1SvImJ_T0013072.1 MGP_129S1SvImJ_G0011161.1 mouse_genomes_project 15 6031221 6032041 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000970.1 MGP_129S1SvImJ_G0000902.1 mouse_genomes_project 15 98301337 98301802 + TEC TEC MGP_129S1SvImJ_T0040478.1 MGP_129S1SvImJ_G0021690.1 mouse_genomes_project 15 2006140 2009453 - MGP_129S1SvImJ_P0040478 protein_coding protein_coding MGP_129S1SvImJ_T0042320.1 MGP_129S1SvImJ_G0022254.1 mouse_genomes_project 15 94688348 94744255 - MGP_129S1SvImJ_P0042320 Yaf2 protein_coding protein_coding MGP_129S1SvImJ_T0042321.1 MGP_129S1SvImJ_G0022254.1 mouse_genomes_project 15 94688351 94744526 - Yaf2 protein_coding processed_transcript MGP_129S1SvImJ_T0003624.1 MGP_129S1SvImJ_G0003284.1 mouse_genomes_project 15 56846965 56847777 - Gm16006 antisense antisense MGP_129S1SvImJ_T0040706.1 MGP_129S1SvImJ_G0021754.1 mouse_genomes_project 15 24567918 24935757 - MGP_129S1SvImJ_P0040706 Fbxl7 protein_coding protein_coding MGP_129S1SvImJ_T0010084.1 MGP_129S1SvImJ_G0008200.1 mouse_genomes_project 15 82694080 82694149 + Mir33 miRNA miRNA MGP_129S1SvImJ_T0040624.1 MGP_129S1SvImJ_G0021729.1 mouse_genomes_project 15 8204497 8208772 - MGP_129S1SvImJ_P0040624 Rxfp3 protein_coding protein_coding MGP_129S1SvImJ_T0041876.1 MGP_129S1SvImJ_G0022117.1 mouse_genomes_project 15 82128715 82148370 - MGP_129S1SvImJ_P0041876 Chadl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041879.1 MGP_129S1SvImJ_G0022117.1 mouse_genomes_project 15 82136584 82151629 - MGP_129S1SvImJ_P0041879 Chadl protein_coding protein_coding MGP_129S1SvImJ_T0041880.1 MGP_129S1SvImJ_G0022117.1 mouse_genomes_project 15 82136600 82148549 - MGP_129S1SvImJ_P0041880 Chadl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040759.1 MGP_129S1SvImJ_G0021779.1 mouse_genomes_project 15 32746088 32748495 - Rpl30 protein_coding processed_transcript MGP_129S1SvImJ_T0040760.1 MGP_129S1SvImJ_G0021779.1 mouse_genomes_project 15 32746088 32748747 - Rpl30 protein_coding retained_intron MGP_129S1SvImJ_T0040761.1 MGP_129S1SvImJ_G0021779.1 mouse_genomes_project 15 32746088 32749217 - MGP_129S1SvImJ_P0040761 Rpl30 protein_coding protein_coding MGP_129S1SvImJ_T0040762.1 MGP_129S1SvImJ_G0021779.1 mouse_genomes_project 15 32746093 32748809 - MGP_129S1SvImJ_P0040762 Rpl30 protein_coding protein_coding MGP_129S1SvImJ_T0040763.1 MGP_129S1SvImJ_G0021779.1 mouse_genomes_project 15 32746158 32747249 - Rpl30 protein_coding retained_intron MGP_129S1SvImJ_T0040764.1 MGP_129S1SvImJ_G0021779.1 mouse_genomes_project 15 32748107 32748846 - Rpl30 protein_coding processed_transcript MGP_129S1SvImJ_T0040868.1 MGP_129S1SvImJ_G0021815.1 mouse_genomes_project 15 37621253 38146909 + MGP_129S1SvImJ_P0040868 Rims2 protein_coding protein_coding MGP_129S1SvImJ_T0040869.1 MGP_129S1SvImJ_G0021815.1 mouse_genomes_project 15 37621284 38146733 + MGP_129S1SvImJ_P0040869 Rims2 protein_coding protein_coding MGP_129S1SvImJ_T0040870.1 MGP_129S1SvImJ_G0021815.1 mouse_genomes_project 15 37698614 37777980 + MGP_129S1SvImJ_P0040870 Rims2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040871.1 MGP_129S1SvImJ_G0021815.1 mouse_genomes_project 15 37819595 38079735 + MGP_129S1SvImJ_P0040871 Rims2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040872.1 MGP_129S1SvImJ_G0021815.1 mouse_genomes_project 15 38124089 38149336 + MGP_129S1SvImJ_P0040872 Rims2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042096.1 MGP_129S1SvImJ_G0022194.1 mouse_genomes_project 15 86636694 86682132 + Ppara protein_coding processed_transcript MGP_129S1SvImJ_T0042097.1 MGP_129S1SvImJ_G0022194.1 mouse_genomes_project 15 86637275 86712369 + MGP_129S1SvImJ_P0042097 Ppara protein_coding protein_coding MGP_129S1SvImJ_T0042098.1 MGP_129S1SvImJ_G0022194.1 mouse_genomes_project 15 86637350 86682227 + Ppara protein_coding processed_transcript MGP_129S1SvImJ_T0042099.1 MGP_129S1SvImJ_G0022194.1 mouse_genomes_project 15 86637487 86713025 + MGP_129S1SvImJ_P0042099 Ppara protein_coding protein_coding MGP_129S1SvImJ_T0042100.1 MGP_129S1SvImJ_G0022194.1 mouse_genomes_project 15 86637842 86711954 + MGP_129S1SvImJ_P0042100 Ppara protein_coding protein_coding MGP_129S1SvImJ_T0042101.1 MGP_129S1SvImJ_G0022194.1 mouse_genomes_project 15 86676739 86682267 + Ppara protein_coding processed_transcript MGP_129S1SvImJ_T0041549.1 MGP_129S1SvImJ_G0022024.1 mouse_genomes_project 15 77585680 77591903 - MGP_129S1SvImJ_P0041549 protein_coding protein_coding MGP_129S1SvImJ_T0042467.1 MGP_129S1SvImJ_G0022303.1 mouse_genomes_project 15 100325951 100346823 - MGP_129S1SvImJ_P0042467 Adcy6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042468.1 MGP_129S1SvImJ_G0022303.1 mouse_genomes_project 15 100325959 100352007 - MGP_129S1SvImJ_P0042468 Adcy6 protein_coding protein_coding MGP_129S1SvImJ_T0017497.1 MGP_129S1SvImJ_G0015301.1 mouse_genomes_project 15 77558188 77560088 - processed_transcript processed_transcript MGP_129S1SvImJ_T0040659.1 MGP_129S1SvImJ_G0021740.1 mouse_genomes_project 15 10073523 10183520 + MGP_129S1SvImJ_P0040659 Drosha protein_coding protein_coding MGP_129S1SvImJ_T0040660.1 MGP_129S1SvImJ_G0021740.1 mouse_genomes_project 15 10073571 10183473 + MGP_129S1SvImJ_P0040660 Drosha protein_coding protein_coding MGP_129S1SvImJ_T0040661.1 MGP_129S1SvImJ_G0021740.1 mouse_genomes_project 15 10073598 10081690 + Drosha protein_coding processed_transcript MGP_129S1SvImJ_T0040662.1 MGP_129S1SvImJ_G0021740.1 mouse_genomes_project 15 10073598 10081690 + Drosha protein_coding processed_transcript MGP_129S1SvImJ_T0040663.1 MGP_129S1SvImJ_G0021740.1 mouse_genomes_project 15 10074835 10081608 + Drosha protein_coding processed_transcript MGP_129S1SvImJ_T0040664.1 MGP_129S1SvImJ_G0021740.1 mouse_genomes_project 15 10080897 10183352 + MGP_129S1SvImJ_P0040664 Drosha protein_coding protein_coding MGP_129S1SvImJ_T0040665.1 MGP_129S1SvImJ_G0021740.1 mouse_genomes_project 15 10084419 10153909 + Drosha protein_coding retained_intron MGP_129S1SvImJ_T0040666.1 MGP_129S1SvImJ_G0021740.1 mouse_genomes_project 15 10129196 10135722 + Drosha protein_coding processed_transcript MGP_129S1SvImJ_T0011412.1 MGP_129S1SvImJ_G0009528.1 mouse_genomes_project 15 76331704 76331989 - Mirt2 misc_RNA misc_RNA MGP_129S1SvImJ_T0042436.1 MGP_129S1SvImJ_G0022291.1 mouse_genomes_project 15 99996253 100006802 - MGP_129S1SvImJ_P0042436 Zfp641 protein_coding protein_coding MGP_129S1SvImJ_T0042437.1 MGP_129S1SvImJ_G0022291.1 mouse_genomes_project 15 99996787 100006755 - MGP_129S1SvImJ_P0042437 Zfp641 protein_coding protein_coding MGP_129S1SvImJ_T0042427.1 MGP_129S1SvImJ_G0022285.1 mouse_genomes_project 15 99786133 99826434 + MGP_129S1SvImJ_P0042427 Pfkm protein_coding protein_coding MGP_129S1SvImJ_T0013095.1 MGP_129S1SvImJ_G0011184.1 mouse_genomes_project 15 44625936 44627616 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011409.1 MGP_129S1SvImJ_G0009525.1 mouse_genomes_project 15 61429766 61429965 + Gm27782 misc_RNA misc_RNA MGP_129S1SvImJ_T0041158.1 MGP_129S1SvImJ_G0021918.1 mouse_genomes_project 15 72795857 72799509 + MGP_129S1SvImJ_P0041158 Chrac1 protein_coding protein_coding MGP_129S1SvImJ_T0041159.1 MGP_129S1SvImJ_G0021918.1 mouse_genomes_project 15 72795857 72802988 + MGP_129S1SvImJ_P0041159 Chrac1 protein_coding protein_coding MGP_129S1SvImJ_T0041160.1 MGP_129S1SvImJ_G0021918.1 mouse_genomes_project 15 72795877 72800208 + Chrac1 protein_coding retained_intron MGP_129S1SvImJ_T0041795.1 MGP_129S1SvImJ_G0022099.1 mouse_genomes_project 15 80622736 80744588 + MGP_129S1SvImJ_P0041795 Cacna1i protein_coding protein_coding MGP_129S1SvImJ_T0041796.1 MGP_129S1SvImJ_G0022099.1 mouse_genomes_project 15 80622915 80744598 + MGP_129S1SvImJ_P0041796 Cacna1i protein_coding unknown_likely_coding MGP_129S1SvImJ_T0041797.1 MGP_129S1SvImJ_G0022099.1 mouse_genomes_project 15 80623248 80742071 + MGP_129S1SvImJ_P0041797 Cacna1i protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041798.1 MGP_129S1SvImJ_G0022099.1 mouse_genomes_project 15 80734158 80740139 + MGP_129S1SvImJ_P0041798 Cacna1i protein_coding protein_coding MGP_129S1SvImJ_T0041799.1 MGP_129S1SvImJ_G0022099.1 mouse_genomes_project 15 80734158 80735748 + MGP_129S1SvImJ_P0041799 Cacna1i protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041800.1 MGP_129S1SvImJ_G0022099.1 mouse_genomes_project 15 80734158 80735748 + MGP_129S1SvImJ_P0041800 Cacna1i protein_coding protein_coding MGP_129S1SvImJ_T0041801.1 MGP_129S1SvImJ_G0022099.1 mouse_genomes_project 15 80734158 80735748 + MGP_129S1SvImJ_P0041801 Cacna1i protein_coding protein_coding MGP_129S1SvImJ_T0006818.1 MGP_129S1SvImJ_G0005623.1 mouse_genomes_project 15 100768342 100771673 + 4930578M01Rik lincRNA lincRNA MGP_129S1SvImJ_T0040726.1 MGP_129S1SvImJ_G0021765.1 mouse_genomes_project 15 29677483 29692222 - MGP_129S1SvImJ_P0040726 Ropn1l protein_coding protein_coding MGP_129S1SvImJ_T0041368.1 MGP_129S1SvImJ_G0021981.1 mouse_genomes_project 15 76363720 76366183 + MGP_129S1SvImJ_P0041368 Smpd5 protein_coding protein_coding MGP_129S1SvImJ_T0041369.1 MGP_129S1SvImJ_G0021981.1 mouse_genomes_project 15 76364254 76365539 + MGP_129S1SvImJ_P0041369 Smpd5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041370.1 MGP_129S1SvImJ_G0021981.1 mouse_genomes_project 15 76364537 76366180 + Smpd5 protein_coding retained_intron MGP_129S1SvImJ_T0041371.1 MGP_129S1SvImJ_G0021981.1 mouse_genomes_project 15 76364595 76365160 + Smpd5 protein_coding retained_intron MGP_129S1SvImJ_T0041252.1 MGP_129S1SvImJ_G0021949.1 mouse_genomes_project 15 75047535 75049611 + MGP_129S1SvImJ_P0041252 protein_coding protein_coding MGP_129S1SvImJ_T0041253.1 MGP_129S1SvImJ_G0021949.1 mouse_genomes_project 15 75047535 75049968 + MGP_129S1SvImJ_P0041253 protein_coding protein_coding MGP_129S1SvImJ_T0099451.1 MGP_129S1SvImJ_G0037518.1 mouse_genomes_project 15 47743913 47743998 - Gm23185 snRNA snRNA MGP_129S1SvImJ_T0000969.1 MGP_129S1SvImJ_G0000901.1 mouse_genomes_project 15 93847866 93850752 + TEC TEC MGP_129S1SvImJ_T0042695.1 MGP_129S1SvImJ_G0022372.1 mouse_genomes_project 15 103495011 103505741 - MGP_129S1SvImJ_P0042695 Krt87 protein_coding protein_coding MGP_129S1SvImJ_T0040646.1 MGP_129S1SvImJ_G0021736.1 mouse_genomes_project 15 9556275 9556737 - MGP_129S1SvImJ_P0040646 1810049J17Rik protein_coding protein_coding MGP_129S1SvImJ_T0041867.1 MGP_129S1SvImJ_G0022116.1 mouse_genomes_project 15 82114637 82138735 + MGP_129S1SvImJ_P0041867 L3mbtl2 protein_coding protein_coding MGP_129S1SvImJ_T0041868.1 MGP_129S1SvImJ_G0022116.1 mouse_genomes_project 15 82114682 82138725 + MGP_129S1SvImJ_P0041868 L3mbtl2 protein_coding protein_coding MGP_129S1SvImJ_T0041869.1 MGP_129S1SvImJ_G0022116.1 mouse_genomes_project 15 82114702 82138725 + L3mbtl2 protein_coding retained_intron MGP_129S1SvImJ_T0041870.1 MGP_129S1SvImJ_G0022116.1 mouse_genomes_project 15 82114704 82138719 + L3mbtl2 protein_coding processed_transcript MGP_129S1SvImJ_T0041871.1 MGP_129S1SvImJ_G0022116.1 mouse_genomes_project 15 82114704 82138735 + MGP_129S1SvImJ_P0041871 L3mbtl2 protein_coding protein_coding MGP_129S1SvImJ_T0041872.1 MGP_129S1SvImJ_G0022116.1 mouse_genomes_project 15 82114749 82132485 + L3mbtl2 protein_coding processed_transcript MGP_129S1SvImJ_T0041873.1 MGP_129S1SvImJ_G0022116.1 mouse_genomes_project 15 82119230 82120917 + L3mbtl2 protein_coding retained_intron MGP_129S1SvImJ_T0041874.1 MGP_129S1SvImJ_G0022116.1 mouse_genomes_project 15 82119299 82126053 + L3mbtl2 protein_coding processed_transcript MGP_129S1SvImJ_T0041875.1 MGP_129S1SvImJ_G0022116.1 mouse_genomes_project 15 82125941 82127714 + MGP_129S1SvImJ_P0041875 L3mbtl2 protein_coding protein_coding MGP_129S1SvImJ_T0041877.1 MGP_129S1SvImJ_G0022116.1 mouse_genomes_project 15 82132428 82134270 + L3mbtl2 protein_coding retained_intron MGP_129S1SvImJ_T0041878.1 MGP_129S1SvImJ_G0022116.1 mouse_genomes_project 15 82136441 82137607 + L3mbtl2 protein_coding retained_intron MGP_129S1SvImJ_T0041649.1 MGP_129S1SvImJ_G0022062.1 mouse_genomes_project 15 79307500 79317285 - MGP_129S1SvImJ_P0041649 Ankrd54 protein_coding protein_coding MGP_129S1SvImJ_T0041650.1 MGP_129S1SvImJ_G0022062.1 mouse_genomes_project 15 79307510 79317285 - Ankrd54 protein_coding retained_intron MGP_129S1SvImJ_T0041651.1 MGP_129S1SvImJ_G0022062.1 mouse_genomes_project 15 79307980 79309820 - MGP_129S1SvImJ_P0041651 Ankrd54 protein_coding protein_coding MGP_129S1SvImJ_T0041652.1 MGP_129S1SvImJ_G0022062.1 mouse_genomes_project 15 79308174 79309751 - MGP_129S1SvImJ_P0041652 Ankrd54 protein_coding protein_coding MGP_129S1SvImJ_T0041653.1 MGP_129S1SvImJ_G0022062.1 mouse_genomes_project 15 79309792 79317282 - MGP_129S1SvImJ_P0041653 Ankrd54 protein_coding protein_coding MGP_129S1SvImJ_T0041654.1 MGP_129S1SvImJ_G0022062.1 mouse_genomes_project 15 79309821 79317236 - MGP_129S1SvImJ_P0041654 Ankrd54 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041655.1 MGP_129S1SvImJ_G0022062.1 mouse_genomes_project 15 79314025 79317293 - Ankrd54 protein_coding retained_intron MGP_129S1SvImJ_T0040446.1 MGP_129S1SvImJ_G0021681.1 mouse_genomes_project 15 128122 152427 - MGP_129S1SvImJ_P0040446 Ccdc152 protein_coding protein_coding MGP_129S1SvImJ_T0040745.1 MGP_129S1SvImJ_G0021775.1 mouse_genomes_project 15 32370315 32393351 + Mtdh protein_coding retained_intron MGP_129S1SvImJ_T0040746.1 MGP_129S1SvImJ_G0021775.1 mouse_genomes_project 15 32370340 32431643 + MGP_129S1SvImJ_P0040746 Mtdh protein_coding protein_coding MGP_129S1SvImJ_T0040747.1 MGP_129S1SvImJ_G0021775.1 mouse_genomes_project 15 32370346 32413984 + Mtdh protein_coding retained_intron MGP_129S1SvImJ_T0040748.1 MGP_129S1SvImJ_G0021775.1 mouse_genomes_project 15 32370657 32423600 + MGP_129S1SvImJ_P0040748 Mtdh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040749.1 MGP_129S1SvImJ_G0021775.1 mouse_genomes_project 15 32370929 32426026 + MGP_129S1SvImJ_P0040749 Mtdh protein_coding protein_coding MGP_129S1SvImJ_T0040750.1 MGP_129S1SvImJ_G0021775.1 mouse_genomes_project 15 32370940 32426057 + MGP_129S1SvImJ_P0040750 Mtdh protein_coding protein_coding MGP_129S1SvImJ_T0040751.1 MGP_129S1SvImJ_G0021775.1 mouse_genomes_project 15 32370943 32413386 + MGP_129S1SvImJ_P0040751 Mtdh protein_coding protein_coding MGP_129S1SvImJ_T0040752.1 MGP_129S1SvImJ_G0021775.1 mouse_genomes_project 15 32371472 32407687 + Mtdh protein_coding processed_transcript MGP_129S1SvImJ_T0040753.1 MGP_129S1SvImJ_G0021775.1 mouse_genomes_project 15 32404655 32429957 + MGP_129S1SvImJ_P0040753 Mtdh protein_coding protein_coding MGP_129S1SvImJ_T0040754.1 MGP_129S1SvImJ_G0021775.1 mouse_genomes_project 15 32422753 32430537 + Mtdh protein_coding processed_transcript MGP_129S1SvImJ_T0042047.1 MGP_129S1SvImJ_G0022172.1 mouse_genomes_project 15 84823849 84854652 - MGP_129S1SvImJ_P0042047 Sult4a1 protein_coding protein_coding MGP_129S1SvImJ_T0042214.1 MGP_129S1SvImJ_G0022226.1 mouse_genomes_project 15 90522851 90525469 + MGP_129S1SvImJ_P0042214 Miox protein_coding protein_coding MGP_129S1SvImJ_T0042215.1 MGP_129S1SvImJ_G0022226.1 mouse_genomes_project 15 90522914 90524578 + Miox protein_coding retained_intron MGP_129S1SvImJ_T0042216.1 MGP_129S1SvImJ_G0022226.1 mouse_genomes_project 15 90523093 90525089 + Miox protein_coding retained_intron MGP_129S1SvImJ_T0042217.1 MGP_129S1SvImJ_G0022226.1 mouse_genomes_project 15 90523383 90524866 + MGP_129S1SvImJ_P0042217 Miox protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042218.1 MGP_129S1SvImJ_G0022226.1 mouse_genomes_project 15 90523384 90524868 + Miox protein_coding retained_intron MGP_129S1SvImJ_T0042219.1 MGP_129S1SvImJ_G0022226.1 mouse_genomes_project 15 90524886 90525465 + MGP_129S1SvImJ_P0042219 Miox protein_coding protein_coding MGP_129S1SvImJ_T0040626.1 MGP_129S1SvImJ_G0021731.1 mouse_genomes_project 15 8569439 8585435 - MGP_129S1SvImJ_P0040626 Tars protein_coding protein_coding MGP_129S1SvImJ_T0042590.1 MGP_129S1SvImJ_G0022347.1 mouse_genomes_project 15 101947088 102144767 + MGP_129S1SvImJ_P0042590 Dip2b protein_coding protein_coding MGP_129S1SvImJ_T0042591.1 MGP_129S1SvImJ_G0022347.1 mouse_genomes_project 15 101947228 102144777 + MGP_129S1SvImJ_P0042591 Dip2b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042592.1 MGP_129S1SvImJ_G0022347.1 mouse_genomes_project 15 102076427 102144767 + MGP_129S1SvImJ_P0042592 Dip2b protein_coding protein_coding MGP_129S1SvImJ_T0042593.1 MGP_129S1SvImJ_G0022347.1 mouse_genomes_project 15 102076427 102140964 + MGP_129S1SvImJ_P0042593 Dip2b protein_coding protein_coding MGP_129S1SvImJ_T0042594.1 MGP_129S1SvImJ_G0022347.1 mouse_genomes_project 15 102126904 102129398 + Dip2b protein_coding processed_transcript MGP_129S1SvImJ_T0040736.1 MGP_129S1SvImJ_G0021769.1 mouse_genomes_project 15 29859965 29882749 + Fam173b protein_coding processed_transcript MGP_129S1SvImJ_T0040737.1 MGP_129S1SvImJ_G0021769.1 mouse_genomes_project 15 29860229 29879305 + MGP_129S1SvImJ_P0040737 Fam173b protein_coding protein_coding MGP_129S1SvImJ_T0040738.1 MGP_129S1SvImJ_G0021769.1 mouse_genomes_project 15 29860229 29880380 + MGP_129S1SvImJ_P0040738 Fam173b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0010064.1 MGP_129S1SvImJ_G0008180.1 mouse_genomes_project 15 67902931 67903027 - Mir30b miRNA miRNA MGP_129S1SvImJ_T0042553.1 MGP_129S1SvImJ_G0022335.1 mouse_genomes_project 15 101449424 101453184 + MGP_129S1SvImJ_P0042553 Aqp5 protein_coding protein_coding MGP_129S1SvImJ_T0042554.1 MGP_129S1SvImJ_G0022335.1 mouse_genomes_project 15 101449603 101453405 + MGP_129S1SvImJ_P0042554 Aqp5 protein_coding protein_coding MGP_129S1SvImJ_T0042147.1 MGP_129S1SvImJ_G0022210.1 mouse_genomes_project 15 90023291 90026824 + MGP_129S1SvImJ_P0042147 Pim3 protein_coding protein_coding MGP_129S1SvImJ_T0040541.1 MGP_129S1SvImJ_G0021707.1 mouse_genomes_project 15 5601060 5603447 - MGP_129S1SvImJ_P0040541 protein_coding protein_coding MGP_129S1SvImJ_T0040952.1 MGP_129S1SvImJ_G0021851.1 mouse_genomes_project 15 54082544 54141577 - MGP_129S1SvImJ_P0040952 Taf2 protein_coding protein_coding MGP_129S1SvImJ_T0003652.1 MGP_129S1SvImJ_G0003305.1 mouse_genomes_project 15 99785023 99787512 + Gm26513 antisense antisense MGP_129S1SvImJ_T0013123.1 MGP_129S1SvImJ_G0011212.1 mouse_genomes_project 15 92839715 92841155 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0042756.1 MGP_129S1SvImJ_G0022409.1 mouse_genomes_project 15 104502519 104509164 + MGP_129S1SvImJ_P0042756 Myg1 protein_coding protein_coding MGP_129S1SvImJ_T0042757.1 MGP_129S1SvImJ_G0022409.1 mouse_genomes_project 15 104502530 104503407 + Myg1 protein_coding retained_intron MGP_129S1SvImJ_T0042758.1 MGP_129S1SvImJ_G0022409.1 mouse_genomes_project 15 104502548 104508821 + Myg1 protein_coding retained_intron MGP_129S1SvImJ_T0042759.1 MGP_129S1SvImJ_G0022409.1 mouse_genomes_project 15 104502560 104508804 + MGP_129S1SvImJ_P0042759 Myg1 protein_coding protein_coding MGP_129S1SvImJ_T0042760.1 MGP_129S1SvImJ_G0022409.1 mouse_genomes_project 15 104502565 104508716 + MGP_129S1SvImJ_P0042760 Myg1 protein_coding protein_coding MGP_129S1SvImJ_T0042761.1 MGP_129S1SvImJ_G0022409.1 mouse_genomes_project 15 104502727 104508165 + Myg1 protein_coding retained_intron MGP_129S1SvImJ_T0042762.1 MGP_129S1SvImJ_G0022409.1 mouse_genomes_project 15 104503240 104507826 + Myg1 protein_coding processed_transcript MGP_129S1SvImJ_T0042763.1 MGP_129S1SvImJ_G0022409.1 mouse_genomes_project 15 104504594 104507850 + Myg1 protein_coding retained_intron MGP_129S1SvImJ_T0042764.1 MGP_129S1SvImJ_G0022409.1 mouse_genomes_project 15 104507719 104508821 + Myg1 protein_coding retained_intron MGP_129S1SvImJ_T0042765.1 MGP_129S1SvImJ_G0022409.1 mouse_genomes_project 15 104508002 104508760 + Myg1 protein_coding retained_intron MGP_129S1SvImJ_T0098321.1 MGP_129S1SvImJ_G0036406.1 mouse_genomes_project 15 75957616 75960005 + pseudogene pseudogene MGP_129S1SvImJ_T0040890.1 MGP_129S1SvImJ_G0021823.1 mouse_genomes_project 15 41003227 41264983 - MGP_129S1SvImJ_P0040890 Angpt1 protein_coding protein_coding MGP_129S1SvImJ_T0040891.1 MGP_129S1SvImJ_G0021823.1 mouse_genomes_project 15 41003358 41264467 - MGP_129S1SvImJ_P0040891 Angpt1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0041064.1 MGP_129S1SvImJ_G0021896.1 mouse_genomes_project 15 63557004 63793145 - MGP_129S1SvImJ_P0041064 Asap1 protein_coding protein_coding MGP_129S1SvImJ_T0041065.1 MGP_129S1SvImJ_G0021896.1 mouse_genomes_project 15 63558683 63793111 - MGP_129S1SvImJ_P0041065 Asap1 protein_coding protein_coding MGP_129S1SvImJ_T0041066.1 MGP_129S1SvImJ_G0021896.1 mouse_genomes_project 15 63558686 63868746 - MGP_129S1SvImJ_P0041066 Asap1 protein_coding protein_coding MGP_129S1SvImJ_T0041067.1 MGP_129S1SvImJ_G0021896.1 mouse_genomes_project 15 63558688 63868583 - MGP_129S1SvImJ_P0041067 Asap1 protein_coding protein_coding MGP_129S1SvImJ_T0041068.1 MGP_129S1SvImJ_G0021896.1 mouse_genomes_project 15 63558688 63830327 - MGP_129S1SvImJ_P0041068 Asap1 protein_coding protein_coding MGP_129S1SvImJ_T0041069.1 MGP_129S1SvImJ_G0021896.1 mouse_genomes_project 15 63558688 63868746 - MGP_129S1SvImJ_P0041069 Asap1 protein_coding protein_coding MGP_129S1SvImJ_T0041070.1 MGP_129S1SvImJ_G0021896.1 mouse_genomes_project 15 63558688 63868746 - MGP_129S1SvImJ_P0041070 Asap1 protein_coding protein_coding MGP_129S1SvImJ_T0041071.1 MGP_129S1SvImJ_G0021896.1 mouse_genomes_project 15 63558688 63868746 - MGP_129S1SvImJ_P0041071 Asap1 protein_coding protein_coding MGP_129S1SvImJ_T0041072.1 MGP_129S1SvImJ_G0021896.1 mouse_genomes_project 15 63558766 63868564 - MGP_129S1SvImJ_P0041072 Asap1 protein_coding protein_coding MGP_129S1SvImJ_T0041073.1 MGP_129S1SvImJ_G0021896.1 mouse_genomes_project 15 63559594 63830327 - MGP_129S1SvImJ_P0041073 Asap1 protein_coding protein_coding MGP_129S1SvImJ_T0041074.1 MGP_129S1SvImJ_G0021896.1 mouse_genomes_project 15 63559594 63830327 - MGP_129S1SvImJ_P0041074 Asap1 protein_coding protein_coding MGP_129S1SvImJ_T0041075.1 MGP_129S1SvImJ_G0021896.1 mouse_genomes_project 15 63565089 63575930 - Asap1 protein_coding retained_intron MGP_129S1SvImJ_T0041076.1 MGP_129S1SvImJ_G0021896.1 mouse_genomes_project 15 63593415 63596148 - Asap1 protein_coding processed_transcript MGP_129S1SvImJ_T0041077.1 MGP_129S1SvImJ_G0021896.1 mouse_genomes_project 15 63593468 63597184 - Asap1 protein_coding retained_intron MGP_129S1SvImJ_T0041078.1 MGP_129S1SvImJ_G0021896.1 mouse_genomes_project 15 63633264 63685525 - MGP_129S1SvImJ_P0041078 Asap1 protein_coding protein_coding MGP_129S1SvImJ_T0041079.1 MGP_129S1SvImJ_G0021896.1 mouse_genomes_project 15 63648646 63868559 - Asap1 protein_coding processed_transcript MGP_129S1SvImJ_T0041080.1 MGP_129S1SvImJ_G0021896.1 mouse_genomes_project 15 63668092 63793145 - Asap1 protein_coding retained_intron MGP_129S1SvImJ_T0041081.1 MGP_129S1SvImJ_G0021896.1 mouse_genomes_project 15 63668586 63792161 - Asap1 protein_coding processed_transcript MGP_129S1SvImJ_T0041082.1 MGP_129S1SvImJ_G0021896.1 mouse_genomes_project 15 63685530 63794356 - MGP_129S1SvImJ_P0041082 Asap1 protein_coding protein_coding MGP_129S1SvImJ_T0041016.1 MGP_129S1SvImJ_G0021871.1 mouse_genomes_project 15 57483997 57493342 - MGP_129S1SvImJ_P0041016 Klhl38 protein_coding protein_coding MGP_129S1SvImJ_T0098512.1 MGP_129S1SvImJ_G0036597.1 mouse_genomes_project 15 92868405 92868518 - Gm24647 rRNA rRNA MGP_129S1SvImJ_T0041189.1 MGP_129S1SvImJ_G0021926.1 mouse_genomes_project 15 73598792 73605381 + MGP_129S1SvImJ_P0041189 Gm6569 protein_coding protein_coding MGP_129S1SvImJ_T0013131.1 MGP_129S1SvImJ_G0011220.1 mouse_genomes_project 15 105866820 105868248 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013130.1 MGP_129S1SvImJ_G0011219.1 mouse_genomes_project 15 101790436 101790706 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0041946.1 MGP_129S1SvImJ_G0022139.1 mouse_genomes_project 15 82755734 82768180 + MGP_129S1SvImJ_P0041946 1500009C09Rik protein_coding protein_coding MGP_129S1SvImJ_T0041947.1 MGP_129S1SvImJ_G0022139.1 mouse_genomes_project 15 82763464 82768195 + MGP_129S1SvImJ_P0041947 1500009C09Rik protein_coding protein_coding MGP_129S1SvImJ_T0010108.1 MGP_129S1SvImJ_G0008224.1 mouse_genomes_project 15 100887157 100887218 + Mir6960 miRNA miRNA MGP_129S1SvImJ_T0042768.1 MGP_129S1SvImJ_G0022412.1 mouse_genomes_project 15 104585063 104586925 + MGP_129S1SvImJ_P0042768 Sp1 protein_coding protein_coding MGP_129S1SvImJ_T0042769.1 MGP_129S1SvImJ_G0022412.1 mouse_genomes_project 15 104585248 104618954 + MGP_129S1SvImJ_P0042769 Sp1 protein_coding protein_coding MGP_129S1SvImJ_T0042770.1 MGP_129S1SvImJ_G0022412.1 mouse_genomes_project 15 104585253 104618954 + MGP_129S1SvImJ_P0042770 Sp1 protein_coding protein_coding MGP_129S1SvImJ_T0042771.1 MGP_129S1SvImJ_G0022412.1 mouse_genomes_project 15 104585300 104622678 + MGP_129S1SvImJ_P0042771 Sp1 protein_coding protein_coding MGP_129S1SvImJ_T0042772.1 MGP_129S1SvImJ_G0022412.1 mouse_genomes_project 15 104585444 104587307 + MGP_129S1SvImJ_P0042772 Sp1 protein_coding protein_coding MGP_129S1SvImJ_T0042773.1 MGP_129S1SvImJ_G0022412.1 mouse_genomes_project 15 104585959 104586925 + MGP_129S1SvImJ_P0042773 Sp1 protein_coding protein_coding MGP_129S1SvImJ_T0042774.1 MGP_129S1SvImJ_G0022412.1 mouse_genomes_project 15 104586278 104587075 + MGP_129S1SvImJ_P0042774 Sp1 protein_coding protein_coding MGP_129S1SvImJ_T0042775.1 MGP_129S1SvImJ_G0022412.1 mouse_genomes_project 15 104616179 104617097 + Sp1 protein_coding processed_transcript MGP_129S1SvImJ_T0041059.1 MGP_129S1SvImJ_G0021894.1 mouse_genomes_project 15 63305484 63332089 - MGP_129S1SvImJ_P0041059 protein_coding protein_coding MGP_129S1SvImJ_T0041060.1 MGP_129S1SvImJ_G0021894.1 mouse_genomes_project 15 63305484 63321084 - MGP_129S1SvImJ_P0041060 protein_coding protein_coding MGP_129S1SvImJ_T0041061.1 MGP_129S1SvImJ_G0021894.1 mouse_genomes_project 15 63305582 63332074 - MGP_129S1SvImJ_P0041061 protein_coding protein_coding MGP_129S1SvImJ_T0042066.1 MGP_129S1SvImJ_G0022179.1 mouse_genomes_project 15 85357225 85361647 - MGP_129S1SvImJ_P0042066 Ldoc1l protein_coding protein_coding MGP_129S1SvImJ_T0099468.1 MGP_129S1SvImJ_G0037535.1 mouse_genomes_project 15 77210968 77211075 + Gm24753 snRNA snRNA MGP_129S1SvImJ_T0100737.1 MGP_129S1SvImJ_G0038804.1 mouse_genomes_project 15 33845506 33845653 + Gm24771 snoRNA snoRNA MGP_129S1SvImJ_T0040457.1 MGP_129S1SvImJ_G0021683.1 mouse_genomes_project 15 829757 844399 - MGP_129S1SvImJ_P0040457 Fbxo4 protein_coding protein_coding MGP_129S1SvImJ_T0040458.1 MGP_129S1SvImJ_G0021683.1 mouse_genomes_project 15 832983 836784 - Fbxo4 protein_coding processed_transcript MGP_129S1SvImJ_T0040459.1 MGP_129S1SvImJ_G0021683.1 mouse_genomes_project 15 835207 835906 - Fbxo4 protein_coding retained_intron MGP_129S1SvImJ_T0040823.1 MGP_129S1SvImJ_G0021801.1 mouse_genomes_project 15 35664969 35809050 + MGP_129S1SvImJ_P0040823 Grhl2 protein_coding protein_coding MGP_129S1SvImJ_T0040824.1 MGP_129S1SvImJ_G0021801.1 mouse_genomes_project 15 35664969 35772233 + MGP_129S1SvImJ_P0040824 Grhl2 protein_coding protein_coding MGP_129S1SvImJ_T0040825.1 MGP_129S1SvImJ_G0021801.1 mouse_genomes_project 15 35664991 35715375 + MGP_129S1SvImJ_P0040825 Grhl2 protein_coding protein_coding MGP_129S1SvImJ_T0040826.1 MGP_129S1SvImJ_G0021801.1 mouse_genomes_project 15 35757090 35809043 + Grhl2 protein_coding processed_transcript MGP_129S1SvImJ_T0040827.1 MGP_129S1SvImJ_G0021801.1 mouse_genomes_project 15 35774288 35806421 + MGP_129S1SvImJ_P0040827 Grhl2 protein_coding protein_coding MGP_129S1SvImJ_T0041592.1 MGP_129S1SvImJ_G0022042.1 mouse_genomes_project 15 78600680 78607972 + MGP_129S1SvImJ_P0041592 Mpst protein_coding protein_coding MGP_129S1SvImJ_T0041593.1 MGP_129S1SvImJ_G0022042.1 mouse_genomes_project 15 78600769 78607972 + MGP_129S1SvImJ_P0041593 Mpst protein_coding protein_coding MGP_129S1SvImJ_T0041594.1 MGP_129S1SvImJ_G0022042.1 mouse_genomes_project 15 78601074 78607972 + MGP_129S1SvImJ_P0041594 Mpst protein_coding protein_coding MGP_129S1SvImJ_T0040755.1 MGP_129S1SvImJ_G0021776.1 mouse_genomes_project 15 32525867 32575576 + MGP_129S1SvImJ_P0040755 Laptm4b protein_coding protein_coding MGP_129S1SvImJ_T0042550.1 MGP_129S1SvImJ_G0022332.1 mouse_genomes_project 15 101316237 101320884 - MGP_129S1SvImJ_P0042550 Bcdin3d protein_coding protein_coding MGP_129S1SvImJ_T0042506.1 MGP_129S1SvImJ_G0022319.1 mouse_genomes_project 15 100820481 100828511 + MGP_129S1SvImJ_P0042506 protein_coding protein_coding MGP_129S1SvImJ_T0041467.1 MGP_129S1SvImJ_G0022000.1 mouse_genomes_project 15 76679424 76693287 - MGP_129S1SvImJ_P0041467 Cpsf1 protein_coding protein_coding MGP_129S1SvImJ_T0041658.1 MGP_129S1SvImJ_G0022065.1 mouse_genomes_project 15 79386512 79392080 - 1700088E04Rik protein_coding processed_transcript MGP_129S1SvImJ_T0041659.1 MGP_129S1SvImJ_G0022065.1 mouse_genomes_project 15 79391818 79398406 - MGP_129S1SvImJ_P0041659 1700088E04Rik protein_coding protein_coding MGP_129S1SvImJ_T0041660.1 MGP_129S1SvImJ_G0022065.1 mouse_genomes_project 15 79391818 79398354 - MGP_129S1SvImJ_P0041660 1700088E04Rik protein_coding protein_coding MGP_129S1SvImJ_T0041661.1 MGP_129S1SvImJ_G0022065.1 mouse_genomes_project 15 79391824 79398420 - MGP_129S1SvImJ_P0041661 1700088E04Rik protein_coding protein_coding MGP_129S1SvImJ_T0041662.1 MGP_129S1SvImJ_G0022065.1 mouse_genomes_project 15 79392155 79398397 - MGP_129S1SvImJ_P0041662 1700088E04Rik protein_coding protein_coding MGP_129S1SvImJ_T0041663.1 MGP_129S1SvImJ_G0022065.1 mouse_genomes_project 15 79392172 79393885 - 1700088E04Rik protein_coding processed_transcript MGP_129S1SvImJ_T0041664.1 MGP_129S1SvImJ_G0022065.1 mouse_genomes_project 15 79392180 79398401 - MGP_129S1SvImJ_P0041664 1700088E04Rik protein_coding protein_coding MGP_129S1SvImJ_T0041665.1 MGP_129S1SvImJ_G0022065.1 mouse_genomes_project 15 79392219 79398372 - MGP_129S1SvImJ_P0041665 1700088E04Rik protein_coding protein_coding MGP_129S1SvImJ_T0041666.1 MGP_129S1SvImJ_G0022065.1 mouse_genomes_project 15 79392245 79398349 - MGP_129S1SvImJ_P0041666 1700088E04Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041667.1 MGP_129S1SvImJ_G0022065.1 mouse_genomes_project 15 79394303 79398370 - MGP_129S1SvImJ_P0041667 1700088E04Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041668.1 MGP_129S1SvImJ_G0022065.1 mouse_genomes_project 15 79394591 79396436 - MGP_129S1SvImJ_P0041668 1700088E04Rik protein_coding protein_coding MGP_129S1SvImJ_T0041669.1 MGP_129S1SvImJ_G0022065.1 mouse_genomes_project 15 79394594 79398420 - MGP_129S1SvImJ_P0041669 1700088E04Rik protein_coding protein_coding MGP_129S1SvImJ_T0041670.1 MGP_129S1SvImJ_G0022065.1 mouse_genomes_project 15 79394596 79398145 - MGP_129S1SvImJ_P0041670 1700088E04Rik protein_coding protein_coding MGP_129S1SvImJ_T0042863.1 MGP_129S1SvImJ_G0022437.1 mouse_genomes_project 15 105528965 105566574 + MGP_129S1SvImJ_P0042863 Copz1 protein_coding protein_coding MGP_129S1SvImJ_T0010087.1 MGP_129S1SvImJ_G0008203.1 mouse_genomes_project 15 82975651 82975711 + Gm27622 miRNA miRNA MGP_129S1SvImJ_T0041478.1 MGP_129S1SvImJ_G0022003.1 mouse_genomes_project 15 76735270 76753531 - MGP_129S1SvImJ_P0041478 Cyhr1 protein_coding protein_coding MGP_129S1SvImJ_T0041479.1 MGP_129S1SvImJ_G0022003.1 mouse_genomes_project 15 76738802 76748576 - MGP_129S1SvImJ_P0041479 Cyhr1 protein_coding protein_coding MGP_129S1SvImJ_T0041480.1 MGP_129S1SvImJ_G0022003.1 mouse_genomes_project 15 76738803 76748872 - MGP_129S1SvImJ_P0041480 Cyhr1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0041481.1 MGP_129S1SvImJ_G0022003.1 mouse_genomes_project 15 76749779 76753587 - MGP_129S1SvImJ_P0041481 Cyhr1 protein_coding protein_coding MGP_129S1SvImJ_T0041482.1 MGP_129S1SvImJ_G0022003.1 mouse_genomes_project 15 76749783 76753578 - MGP_129S1SvImJ_P0041482 Cyhr1 protein_coding protein_coding MGP_129S1SvImJ_T0042717.1 MGP_129S1SvImJ_G0022393.1 mouse_genomes_project 15 104062423 104073415 - MGP_129S1SvImJ_P0042717 Krt79 protein_coding protein_coding MGP_129S1SvImJ_T0040782.1 MGP_129S1SvImJ_G0021786.1 mouse_genomes_project 15 33662493 33669698 + MGP_129S1SvImJ_P0040782 Osr2 protein_coding protein_coding MGP_129S1SvImJ_T0042439.1 MGP_129S1SvImJ_G0022293.1 mouse_genomes_project 15 100052450 100053368 - MGP_129S1SvImJ_P0042439 Olfr284 protein_coding protein_coding MGP_129S1SvImJ_T0042440.1 MGP_129S1SvImJ_G0022293.1 mouse_genomes_project 15 100052450 100053416 - MGP_129S1SvImJ_P0042440 Olfr284 protein_coding protein_coding MGP_129S1SvImJ_T0010057.1 MGP_129S1SvImJ_G0008173.1 mouse_genomes_project 15 36748223 36748332 + Gm24098 miRNA miRNA MGP_129S1SvImJ_T0041179.1 MGP_129S1SvImJ_G0021923.1 mouse_genomes_project 15 73448912 73463065 - MGP_129S1SvImJ_P0041179 Gpr20 protein_coding protein_coding MGP_129S1SvImJ_T0010067.1 MGP_129S1SvImJ_G0008183.1 mouse_genomes_project 15 72970805 72970873 - Mir151 miRNA miRNA MGP_129S1SvImJ_T0017493.1 MGP_129S1SvImJ_G0015299.1 mouse_genomes_project 15 67900231 67902947 - Gm26621 processed_transcript TEC MGP_129S1SvImJ_T0017494.1 MGP_129S1SvImJ_G0015299.1 mouse_genomes_project 15 67900652 67902927 - Gm26621 processed_transcript processed_transcript MGP_129S1SvImJ_T0042586.1 MGP_129S1SvImJ_G0022345.1 mouse_genomes_project 15 101816038 101829153 - MGP_129S1SvImJ_P0042586 protein_coding protein_coding MGP_129S1SvImJ_T0042587.1 MGP_129S1SvImJ_G0022345.1 mouse_genomes_project 15 101816043 101867919 - MGP_129S1SvImJ_P0042587 protein_coding protein_coding MGP_129S1SvImJ_T0042141.1 MGP_129S1SvImJ_G0022207.1 mouse_genomes_project 15 89897196 89922156 + protein_coding processed_transcript MGP_129S1SvImJ_T0041856.1 MGP_129S1SvImJ_G0022115.1 mouse_genomes_project 15 82030224 82033221 + Ep300 protein_coding processed_transcript MGP_129S1SvImJ_T0041857.1 MGP_129S1SvImJ_G0022115.1 mouse_genomes_project 15 82030270 82102894 + MGP_129S1SvImJ_P0041857 Ep300 protein_coding protein_coding MGP_129S1SvImJ_T0041858.1 MGP_129S1SvImJ_G0022115.1 mouse_genomes_project 15 82031093 82072750 + Ep300 protein_coding retained_intron MGP_129S1SvImJ_T0041859.1 MGP_129S1SvImJ_G0022115.1 mouse_genomes_project 15 82031502 82101042 + MGP_129S1SvImJ_P0041859 Ep300 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0041860.1 MGP_129S1SvImJ_G0022115.1 mouse_genomes_project 15 82061833 82072050 + MGP_129S1SvImJ_P0041860 Ep300 protein_coding protein_coding MGP_129S1SvImJ_T0041861.1 MGP_129S1SvImJ_G0022115.1 mouse_genomes_project 15 82061851 82065074 + Ep300 protein_coding retained_intron MGP_129S1SvImJ_T0041862.1 MGP_129S1SvImJ_G0022115.1 mouse_genomes_project 15 82069593 82074985 + MGP_129S1SvImJ_P0041862 Ep300 protein_coding protein_coding MGP_129S1SvImJ_T0041863.1 MGP_129S1SvImJ_G0022115.1 mouse_genomes_project 15 82074911 82076395 + MGP_129S1SvImJ_P0041863 Ep300 protein_coding protein_coding MGP_129S1SvImJ_T0041864.1 MGP_129S1SvImJ_G0022115.1 mouse_genomes_project 15 82082513 82089064 + Ep300 protein_coding retained_intron MGP_129S1SvImJ_T0041865.1 MGP_129S1SvImJ_G0022115.1 mouse_genomes_project 15 82084682 82094213 + Ep300 protein_coding retained_intron MGP_129S1SvImJ_T0041866.1 MGP_129S1SvImJ_G0022115.1 mouse_genomes_project 15 82094457 82098790 + Ep300 protein_coding retained_intron MGP_129S1SvImJ_T0041497.1 MGP_129S1SvImJ_G0022009.1 mouse_genomes_project 15 76805642 76813081 - MGP_129S1SvImJ_P0041497 Recql4 protein_coding protein_coding MGP_129S1SvImJ_T0041226.1 MGP_129S1SvImJ_G0021941.1 mouse_genomes_project 15 74614681 74624498 + MGP_129S1SvImJ_P0041226 protein_coding protein_coding MGP_129S1SvImJ_T0041227.1 MGP_129S1SvImJ_G0021941.1 mouse_genomes_project 15 74617216 74619217 + protein_coding processed_transcript MGP_129S1SvImJ_T0041228.1 MGP_129S1SvImJ_G0021941.1 mouse_genomes_project 15 74617216 74619217 + protein_coding processed_transcript MGP_129S1SvImJ_T0041747.1 MGP_129S1SvImJ_G0022086.1 mouse_genomes_project 15 80083587 80101904 - MGP_129S1SvImJ_P0041747 Nptxr protein_coding protein_coding MGP_129S1SvImJ_T0041748.1 MGP_129S1SvImJ_G0022086.1 mouse_genomes_project 15 80083588 80101961 - MGP_129S1SvImJ_P0041748 Nptxr protein_coding protein_coding MGP_129S1SvImJ_T0041749.1 MGP_129S1SvImJ_G0022086.1 mouse_genomes_project 15 80086488 80088224 - Nptxr protein_coding processed_transcript MGP_129S1SvImJ_T0006828.1 MGP_129S1SvImJ_G0005632.1 mouse_genomes_project 15 105340881 105343200 - Gm28265 lincRNA lincRNA MGP_129S1SvImJ_T0042729.1 MGP_129S1SvImJ_G0022401.1 mouse_genomes_project 15 104301789 104317070 + MGP_129S1SvImJ_P0042729 Soat2 protein_coding protein_coding MGP_129S1SvImJ_T0042730.1 MGP_129S1SvImJ_G0022401.1 mouse_genomes_project 15 104302379 104316728 + MGP_129S1SvImJ_P0042730 Soat2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0041086.1 MGP_129S1SvImJ_G0021900.1 mouse_genomes_project 15 65287414 65291732 + Efr3a protein_coding processed_transcript MGP_129S1SvImJ_T0041087.1 MGP_129S1SvImJ_G0021900.1 mouse_genomes_project 15 65287420 65370912 + MGP_129S1SvImJ_P0041087 Efr3a protein_coding protein_coding MGP_129S1SvImJ_T0041088.1 MGP_129S1SvImJ_G0021900.1 mouse_genomes_project 15 65287421 65291215 + Efr3a protein_coding processed_transcript MGP_129S1SvImJ_T0041089.1 MGP_129S1SvImJ_G0021900.1 mouse_genomes_project 15 65287421 65366348 + MGP_129S1SvImJ_P0041089 Efr3a protein_coding protein_coding MGP_129S1SvImJ_T0041090.1 MGP_129S1SvImJ_G0021900.1 mouse_genomes_project 15 65287422 65330934 + Efr3a protein_coding processed_transcript MGP_129S1SvImJ_T0041091.1 MGP_129S1SvImJ_G0021900.1 mouse_genomes_project 15 65287426 65326593 + MGP_129S1SvImJ_P0041091 Efr3a protein_coding protein_coding MGP_129S1SvImJ_T0041092.1 MGP_129S1SvImJ_G0021900.1 mouse_genomes_project 15 65287428 65323666 + Efr3a protein_coding retained_intron MGP_129S1SvImJ_T0041093.1 MGP_129S1SvImJ_G0021900.1 mouse_genomes_project 15 65287428 65320986 + MGP_129S1SvImJ_P0041093 Efr3a protein_coding protein_coding MGP_129S1SvImJ_T0041094.1 MGP_129S1SvImJ_G0021900.1 mouse_genomes_project 15 65288220 65291221 + Efr3a protein_coding processed_transcript MGP_129S1SvImJ_T0041095.1 MGP_129S1SvImJ_G0021900.1 mouse_genomes_project 15 65348206 65353735 + Efr3a protein_coding retained_intron MGP_129S1SvImJ_T0041096.1 MGP_129S1SvImJ_G0021900.1 mouse_genomes_project 15 65352404 65354639 + Efr3a protein_coding retained_intron MGP_129S1SvImJ_T0041097.1 MGP_129S1SvImJ_G0021900.1 mouse_genomes_project 15 65354410 65364092 + Efr3a protein_coding retained_intron MGP_129S1SvImJ_T0040957.1 MGP_129S1SvImJ_G0021853.1 mouse_genomes_project 15 54172677 54186513 - MGP_129S1SvImJ_P0040957 Gm9920 protein_coding protein_coding MGP_129S1SvImJ_T0040958.1 MGP_129S1SvImJ_G0021853.1 mouse_genomes_project 15 54172825 54186391 - MGP_129S1SvImJ_P0040958 Gm9920 protein_coding protein_coding MGP_129S1SvImJ_T0040959.1 MGP_129S1SvImJ_G0021853.1 mouse_genomes_project 15 54183206 54186608 - Gm9920 protein_coding processed_transcript MGP_129S1SvImJ_T0040960.1 MGP_129S1SvImJ_G0021853.1 mouse_genomes_project 15 54184793 54186391 - Gm9920 protein_coding retained_intron MGP_129S1SvImJ_T0042588.1 MGP_129S1SvImJ_G0022346.1 mouse_genomes_project 15 101870923 101918303 + MGP_129S1SvImJ_P0042588 Larp4 protein_coding protein_coding MGP_129S1SvImJ_T0042589.1 MGP_129S1SvImJ_G0022346.1 mouse_genomes_project 15 101873838 101918318 + MGP_129S1SvImJ_P0042589 Larp4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0041084.1 MGP_129S1SvImJ_G0021898.1 mouse_genomes_project 15 64303207 64438156 + MGP_129S1SvImJ_P0041084 Gm21798 protein_coding protein_coding MGP_129S1SvImJ_T0041604.1 MGP_129S1SvImJ_G0022044.1 mouse_genomes_project 15 78635129 78665616 - MGP_129S1SvImJ_P0041604 Tmprss6 protein_coding protein_coding MGP_129S1SvImJ_T0006825.1 MGP_129S1SvImJ_G0005629.1 mouse_genomes_project 15 104669029 104672230 - lincRNA lincRNA MGP_129S1SvImJ_T0040946.1 MGP_129S1SvImJ_G0021848.1 mouse_genomes_project 15 53615007 53648361 + MGP_129S1SvImJ_P0040946 Mal2 protein_coding protein_coding MGP_129S1SvImJ_T0042879.1 MGP_129S1SvImJ_G0022445.1 mouse_genomes_project 15 105800577 105811131 - MGP_129S1SvImJ_P0042879 Ppp1r1a protein_coding protein_coding MGP_129S1SvImJ_T0041671.1 MGP_129S1SvImJ_G0022066.1 mouse_genomes_project 15 79398517 79408947 + MGP_129S1SvImJ_P0041671 Polr2f protein_coding protein_coding MGP_129S1SvImJ_T0041672.1 MGP_129S1SvImJ_G0022066.1 mouse_genomes_project 15 79398529 79408948 + MGP_129S1SvImJ_P0041672 Polr2f protein_coding unknown_likely_coding MGP_129S1SvImJ_T0041965.1 MGP_129S1SvImJ_G0022149.1 mouse_genomes_project 15 82972139 82980831 + MGP_129S1SvImJ_P0041965 protein_coding protein_coding MGP_129S1SvImJ_T0099436.1 MGP_129S1SvImJ_G0037503.1 mouse_genomes_project 15 5267735 5267846 + Gm24144 snRNA snRNA MGP_129S1SvImJ_T0041723.1 MGP_129S1SvImJ_G0022078.1 mouse_genomes_project 15 79840177 79893324 - MGP_129S1SvImJ_P0041723 Dmc1 protein_coding protein_coding MGP_129S1SvImJ_T0040668.1 MGP_129S1SvImJ_G0021742.1 mouse_genomes_project 15 14258983 14339867 + MGP_129S1SvImJ_P0040668 Cdh9 protein_coding protein_coding MGP_129S1SvImJ_T0010071.1 MGP_129S1SvImJ_G0008187.1 mouse_genomes_project 15 76357790 76357880 - Mir3079 miRNA miRNA MGP_129S1SvImJ_T0042714.1 MGP_129S1SvImJ_G0022390.1 mouse_genomes_project 15 103993666 104004641 - MGP_129S1SvImJ_P0042714 Krt77 protein_coding protein_coding MGP_129S1SvImJ_T0041025.1 MGP_129S1SvImJ_G0021877.1 mouse_genomes_project 15 58079893 58084026 + MGP_129S1SvImJ_P0041025 Trmt12 protein_coding protein_coding MGP_129S1SvImJ_T0041036.1 MGP_129S1SvImJ_G0021883.1 mouse_genomes_project 15 58549240 58594510 - MGP_129S1SvImJ_P0041036 E430025E21Rik protein_coding protein_coding MGP_129S1SvImJ_T0100747.1 MGP_129S1SvImJ_G0038814.1 mouse_genomes_project 15 57307955 57308082 + Gm22488 snoRNA snoRNA MGP_129S1SvImJ_T0042639.1 MGP_129S1SvImJ_G0022359.1 mouse_genomes_project 15 102658795 102674329 - MGP_129S1SvImJ_P0042639 Cela1 protein_coding protein_coding MGP_129S1SvImJ_T0013102.1 MGP_129S1SvImJ_G0011191.1 mouse_genomes_project 15 61578109 61579221 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0042632.1 MGP_129S1SvImJ_G0022358.1 mouse_genomes_project 15 102625571 102653899 - MGP_129S1SvImJ_P0042632 Bin2 protein_coding protein_coding MGP_129S1SvImJ_T0042633.1 MGP_129S1SvImJ_G0022358.1 mouse_genomes_project 15 102625577 102653851 - MGP_129S1SvImJ_P0042633 Bin2 protein_coding protein_coding MGP_129S1SvImJ_T0042634.1 MGP_129S1SvImJ_G0022358.1 mouse_genomes_project 15 102625577 102653873 - MGP_129S1SvImJ_P0042634 Bin2 protein_coding protein_coding MGP_129S1SvImJ_T0042635.1 MGP_129S1SvImJ_G0022358.1 mouse_genomes_project 15 102629769 102653851 - MGP_129S1SvImJ_P0042635 Bin2 protein_coding protein_coding MGP_129S1SvImJ_T0042636.1 MGP_129S1SvImJ_G0022358.1 mouse_genomes_project 15 102629865 102653871 - MGP_129S1SvImJ_P0042636 Bin2 protein_coding protein_coding MGP_129S1SvImJ_T0042637.1 MGP_129S1SvImJ_G0022358.1 mouse_genomes_project 15 102629907 102636247 - Bin2 protein_coding processed_transcript MGP_129S1SvImJ_T0042638.1 MGP_129S1SvImJ_G0022358.1 mouse_genomes_project 15 102633816 102635326 - Bin2 protein_coding retained_intron MGP_129S1SvImJ_T0041972.1 MGP_129S1SvImJ_G0022155.1 mouse_genomes_project 15 83438528 83553880 - MGP_129S1SvImJ_P0041972 Tcf20 protein_coding protein_coding MGP_129S1SvImJ_T0041973.1 MGP_129S1SvImJ_G0022155.1 mouse_genomes_project 15 83438528 83553880 - MGP_129S1SvImJ_P0041973 Tcf20 protein_coding protein_coding MGP_129S1SvImJ_T0099457.1 MGP_129S1SvImJ_G0037524.1 mouse_genomes_project 15 58022921 58023077 - Gm24041 snRNA snRNA MGP_129S1SvImJ_T0003627.1 MGP_129S1SvImJ_G0003287.1 mouse_genomes_project 15 65785169 65788496 + Gm27242 antisense antisense MGP_129S1SvImJ_T0010047.1 MGP_129S1SvImJ_G0008163.1 mouse_genomes_project 15 12049596 12049828 - Gm24080 miRNA miRNA MGP_129S1SvImJ_T0042722.1 MGP_129S1SvImJ_G0022398.1 mouse_genomes_project 15 104243214 104256628 + MGP_129S1SvImJ_P0042722 Tns2 protein_coding protein_coding MGP_129S1SvImJ_T0042723.1 MGP_129S1SvImJ_G0022398.1 mouse_genomes_project 15 104243214 104256618 + MGP_129S1SvImJ_P0042723 Tns2 protein_coding protein_coding MGP_129S1SvImJ_T0098510.1 MGP_129S1SvImJ_G0036595.1 mouse_genomes_project 15 82857287 82857406 + n-R5s41 rRNA rRNA MGP_129S1SvImJ_T0042094.1 MGP_129S1SvImJ_G0022193.1 mouse_genomes_project 15 86417021 86460829 - MGP_129S1SvImJ_P0042094 Wnt7b protein_coding protein_coding MGP_129S1SvImJ_T0042095.1 MGP_129S1SvImJ_G0022193.1 mouse_genomes_project 15 86417025 86465047 - MGP_129S1SvImJ_P0042095 Wnt7b protein_coding protein_coding MGP_129S1SvImJ_T0041933.1 MGP_129S1SvImJ_G0022131.1 mouse_genomes_project 15 82527651 82532181 - MGP_129S1SvImJ_P0041933 protein_coding protein_coding MGP_129S1SvImJ_T0040822.1 MGP_129S1SvImJ_G0021800.1 mouse_genomes_project 15 35424449 35439334 - MGP_129S1SvImJ_P0040822 Zfp706 protein_coding protein_coding MGP_129S1SvImJ_T0041063.1 MGP_129S1SvImJ_G0021895.1 mouse_genomes_project 15 63386055 63418442 - MGP_129S1SvImJ_P0041063 Fam49b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042268.1 MGP_129S1SvImJ_G0022240.1 mouse_genomes_project 15 90779341 90785588 + MGP_129S1SvImJ_P0042268 Acr protein_coding protein_coding MGP_129S1SvImJ_T0042428.1 MGP_129S1SvImJ_G0022286.1 mouse_genomes_project 15 99828621 99860336 - MGP_129S1SvImJ_P0042428 Asb8 protein_coding protein_coding MGP_129S1SvImJ_T0042429.1 MGP_129S1SvImJ_G0022286.1 mouse_genomes_project 15 99829698 99840807 - MGP_129S1SvImJ_P0042429 Asb8 protein_coding protein_coding MGP_129S1SvImJ_T0042430.1 MGP_129S1SvImJ_G0022286.1 mouse_genomes_project 15 99829698 99840760 - MGP_129S1SvImJ_P0042430 Asb8 protein_coding protein_coding MGP_129S1SvImJ_T0042431.1 MGP_129S1SvImJ_G0022286.1 mouse_genomes_project 15 99829698 99860271 - MGP_129S1SvImJ_P0042431 Asb8 protein_coding protein_coding MGP_129S1SvImJ_T0102257.1 MGP_129S1SvImJ_G0040091.1 mouse_genomes_project 15 75140444 75143616 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0042532.1 MGP_129S1SvImJ_G0022329.1 mouse_genomes_project 15 101155012 101210607 - MGP_129S1SvImJ_P0042532 Fmnl3 protein_coding protein_coding MGP_129S1SvImJ_T0042533.1 MGP_129S1SvImJ_G0022329.1 mouse_genomes_project 15 101155012 101210574 - MGP_129S1SvImJ_P0042533 Fmnl3 protein_coding protein_coding MGP_129S1SvImJ_T0042534.1 MGP_129S1SvImJ_G0022329.1 mouse_genomes_project 15 101155012 101210574 - MGP_129S1SvImJ_P0042534 Fmnl3 protein_coding protein_coding MGP_129S1SvImJ_T0042535.1 MGP_129S1SvImJ_G0022329.1 mouse_genomes_project 15 101162173 101163441 - Fmnl3 protein_coding retained_intron MGP_129S1SvImJ_T0042536.1 MGP_129S1SvImJ_G0022329.1 mouse_genomes_project 15 101165624 101173508 - Fmnl3 protein_coding processed_transcript MGP_129S1SvImJ_T0040889.1 MGP_129S1SvImJ_G0021822.1 mouse_genomes_project 15 40417455 40421865 - MGP_129S1SvImJ_P0040889 Abra protein_coding protein_coding MGP_129S1SvImJ_T0041367.1 MGP_129S1SvImJ_G0021980.1 mouse_genomes_project 15 76332658 76359484 + MGP_129S1SvImJ_P0041367 Spatc1 protein_coding protein_coding MGP_129S1SvImJ_T0041961.1 MGP_129S1SvImJ_G0022145.1 mouse_genomes_project 15 82864781 82868912 - MGP_129S1SvImJ_P0041961 Ndufa6 protein_coding protein_coding MGP_129S1SvImJ_T0102260.1 MGP_129S1SvImJ_G0040094.1 mouse_genomes_project 15 75240588 75240817 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0040728.1 MGP_129S1SvImJ_G0021767.1 mouse_genomes_project 15 29823360 29846460 + MGP_129S1SvImJ_P0040728 Cmbl protein_coding protein_coding MGP_129S1SvImJ_T0040729.1 MGP_129S1SvImJ_G0021767.1 mouse_genomes_project 15 29823371 29848094 + MGP_129S1SvImJ_P0040729 Cmbl protein_coding protein_coding MGP_129S1SvImJ_T0040730.1 MGP_129S1SvImJ_G0021767.1 mouse_genomes_project 15 29826822 29843479 + MGP_129S1SvImJ_P0040730 Cmbl protein_coding protein_coding MGP_129S1SvImJ_T0040460.1 MGP_129S1SvImJ_G0021684.1 mouse_genomes_project 15 846893 860581 - MGP_129S1SvImJ_P0040460 AW549877 protein_coding protein_coding MGP_129S1SvImJ_T0006820.1 MGP_129S1SvImJ_G0005625.1 mouse_genomes_project 15 102595183 102596156 - C330013E15Rik lincRNA lincRNA MGP_129S1SvImJ_T0099466.1 MGP_129S1SvImJ_G0037533.1 mouse_genomes_project 15 76088418 76088576 + Gm23027 snRNA snRNA MGP_129S1SvImJ_T0040502.1 MGP_129S1SvImJ_G0021696.1 mouse_genomes_project 15 3414585 3473123 + MGP_129S1SvImJ_P0040502 C9 protein_coding protein_coding MGP_129S1SvImJ_T0040503.1 MGP_129S1SvImJ_G0021696.1 mouse_genomes_project 15 3414630 3438658 + MGP_129S1SvImJ_P0040503 C9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0040504.1 MGP_129S1SvImJ_G0021696.1 mouse_genomes_project 15 3463863 3465806 + C9 protein_coding retained_intron MGP_129S1SvImJ_T0040505.1 MGP_129S1SvImJ_G0021696.1 mouse_genomes_project 15 3464301 3473116 + MGP_129S1SvImJ_P0040505 C9 protein_coding protein_coding MGP_129S1SvImJ_T0017513.1 MGP_129S1SvImJ_G0015310.1 mouse_genomes_project 15 101071698 101085021 + 1700120C14Rik processed_transcript antisense MGP_129S1SvImJ_T0017514.1 MGP_129S1SvImJ_G0015310.1 mouse_genomes_project 15 101071746 101082003 + 1700120C14Rik processed_transcript antisense MGP_129S1SvImJ_T0017515.1 MGP_129S1SvImJ_G0015310.1 mouse_genomes_project 15 101071748 101073176 + 1700120C14Rik processed_transcript retained_intron MGP_129S1SvImJ_T0010104.1 MGP_129S1SvImJ_G0008220.1 mouse_genomes_project 15 90361314 90361387 - Mir6958 miRNA miRNA MGP_129S1SvImJ_T0042442.1 MGP_129S1SvImJ_G0022295.1 mouse_genomes_project 15 100121347 100136510 + MGP_129S1SvImJ_P0042442 1700031M16Rik protein_coding protein_coding MGP_129S1SvImJ_T0042443.1 MGP_129S1SvImJ_G0022295.1 mouse_genomes_project 15 100121354 100139184 + MGP_129S1SvImJ_P0042443 1700031M16Rik protein_coding protein_coding MGP_129S1SvImJ_T0042444.1 MGP_129S1SvImJ_G0022295.1 mouse_genomes_project 15 100121373 100135721 + 1700031M16Rik protein_coding processed_transcript MGP_129S1SvImJ_T0042445.1 MGP_129S1SvImJ_G0022295.1 mouse_genomes_project 15 100121373 100138304 + 1700031M16Rik protein_coding processed_transcript MGP_129S1SvImJ_T0042446.1 MGP_129S1SvImJ_G0022295.1 mouse_genomes_project 15 100121373 100138304 + 1700031M16Rik protein_coding processed_transcript MGP_129S1SvImJ_T0042447.1 MGP_129S1SvImJ_G0022295.1 mouse_genomes_project 15 100121373 100139055 + MGP_129S1SvImJ_P0042447 1700031M16Rik protein_coding protein_coding MGP_129S1SvImJ_T0042448.1 MGP_129S1SvImJ_G0022295.1 mouse_genomes_project 15 100121373 100139188 + MGP_129S1SvImJ_P0042448 1700031M16Rik protein_coding protein_coding MGP_129S1SvImJ_T0010074.1 MGP_129S1SvImJ_G0008190.1 mouse_genomes_project 15 79126188 79126262 + Mir6955 miRNA miRNA MGP_129S1SvImJ_T0011416.1 MGP_129S1SvImJ_G0009532.1 mouse_genomes_project 15 94634472 94634876 + Gm24447 misc_RNA misc_RNA MGP_129S1SvImJ_T0102253.1 MGP_129S1SvImJ_G0040087.1 mouse_genomes_project 15 74768885 74769036 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0100734.1 MGP_129S1SvImJ_G0038801.1 mouse_genomes_project 15 32428498 32428622 - Gm24500 snoRNA snoRNA MGP_129S1SvImJ_T0017500.1 MGP_129S1SvImJ_G0015303.1 mouse_genomes_project 15 78278875 78306620 + A730060N03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0006772.1 MGP_129S1SvImJ_G0005598.1 mouse_genomes_project 15 43403899 43417037 + 2310069G16Rik lincRNA lincRNA MGP_129S1SvImJ_T0040468.1 MGP_129S1SvImJ_G0021687.1 mouse_genomes_project 15 1603667 1672773 + MGP_129S1SvImJ_P0040468 C6 protein_coding protein_coding MGP_129S1SvImJ_T0040469.1 MGP_129S1SvImJ_G0021687.1 mouse_genomes_project 15 1603708 1631238 + MGP_129S1SvImJ_P0040469 C6 protein_coding protein_coding MGP_129S1SvImJ_T0040470.1 MGP_129S1SvImJ_G0021687.1 mouse_genomes_project 15 1603708 1672370 + MGP_129S1SvImJ_P0040470 C6 protein_coding protein_coding MGP_129S1SvImJ_T0040471.1 MGP_129S1SvImJ_G0021687.1 mouse_genomes_project 15 1603776 1684158 + MGP_129S1SvImJ_P0040471 C6 protein_coding protein_coding MGP_129S1SvImJ_T0040472.1 MGP_129S1SvImJ_G0021687.1 mouse_genomes_project 15 1614729 1659697 + MGP_129S1SvImJ_P0040472 C6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0040473.1 MGP_129S1SvImJ_G0021687.1 mouse_genomes_project 15 1636654 1659604 + C6 protein_coding processed_transcript MGP_129S1SvImJ_T0040474.1 MGP_129S1SvImJ_G0021687.1 mouse_genomes_project 15 1661285 1677465 + MGP_129S1SvImJ_P0040474 C6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0041148.1 MGP_129S1SvImJ_G0021914.1 mouse_genomes_project 15 71102850 71391134 - MGP_129S1SvImJ_P0041148 Fam135b protein_coding protein_coding MGP_129S1SvImJ_T0010051.1 MGP_129S1SvImJ_G0008167.1 mouse_genomes_project 15 27892027 27892101 - Mir3964 miRNA miRNA MGP_129S1SvImJ_T0003618.1 MGP_129S1SvImJ_G0003280.1 mouse_genomes_project 15 35663854 35665093 - Gm16136 antisense antisense MGP_129S1SvImJ_T0003619.1 MGP_129S1SvImJ_G0003280.1 mouse_genomes_project 15 35663872 35665243 - Gm16136 antisense antisense MGP_129S1SvImJ_T0003620.1 MGP_129S1SvImJ_G0003280.1 mouse_genomes_project 15 35664588 35665075 - Gm16136 antisense antisense MGP_129S1SvImJ_T0041286.1 MGP_129S1SvImJ_G0021962.1 mouse_genomes_project 15 75938497 75942015 - MGP_129S1SvImJ_P0041286 Naprt protein_coding protein_coding MGP_129S1SvImJ_T0041966.1 MGP_129S1SvImJ_G0022150.1 mouse_genomes_project 15 82975643 82980064 + MGP_129S1SvImJ_P0041966 protein_coding protein_coding MGP_129S1SvImJ_T0000967.1 MGP_129S1SvImJ_G0000899.1 mouse_genomes_project 15 82029090 82029945 - TEC TEC MGP_129S1SvImJ_T0042485.1 MGP_129S1SvImJ_G0022310.1 mouse_genomes_project 15 100529402 100535765 - MGP_129S1SvImJ_P0042485 Wnt10b protein_coding protein_coding MGP_129S1SvImJ_T0042486.1 MGP_129S1SvImJ_G0022310.1 mouse_genomes_project 15 100529849 100534880 - MGP_129S1SvImJ_P0042486 Wnt10b protein_coding protein_coding MGP_129S1SvImJ_T0044673.1 MGP_129S1SvImJ_G0022882.1 mouse_genomes_project 16 54992373 55026757 - MGP_129S1SvImJ_P0044673 Cep97 protein_coding protein_coding MGP_129S1SvImJ_T0044674.1 MGP_129S1SvImJ_G0022882.1 mouse_genomes_project 16 55014964 55026759 - MGP_129S1SvImJ_P0044674 Cep97 protein_coding protein_coding MGP_129S1SvImJ_T0044675.1 MGP_129S1SvImJ_G0022882.1 mouse_genomes_project 16 55014971 55026816 - MGP_129S1SvImJ_P0044675 Cep97 protein_coding protein_coding MGP_129S1SvImJ_T0044676.1 MGP_129S1SvImJ_G0022882.1 mouse_genomes_project 16 55015159 55026795 - MGP_129S1SvImJ_P0044676 Cep97 protein_coding protein_coding MGP_129S1SvImJ_T0044590.1 MGP_129S1SvImJ_G0022858.1 mouse_genomes_project 16 44522152 44535169 - MGP_129S1SvImJ_P0044590 Abhd10 protein_coding protein_coding MGP_129S1SvImJ_T0044591.1 MGP_129S1SvImJ_G0022858.1 mouse_genomes_project 16 44523974 44535116 - MGP_129S1SvImJ_P0044591 Abhd10 protein_coding protein_coding MGP_129S1SvImJ_T0044592.1 MGP_129S1SvImJ_G0022858.1 mouse_genomes_project 16 44529199 44535099 - Abhd10 protein_coding processed_transcript MGP_129S1SvImJ_T0044593.1 MGP_129S1SvImJ_G0022858.1 mouse_genomes_project 16 44532562 44535121 - Abhd10 protein_coding processed_transcript MGP_129S1SvImJ_T0044594.1 MGP_129S1SvImJ_G0022858.1 mouse_genomes_project 16 44533069 44535114 - Abhd10 protein_coding processed_transcript MGP_129S1SvImJ_T0100766.1 MGP_129S1SvImJ_G0038833.1 mouse_genomes_project 16 5055419 5055563 + Gm24579 snoRNA snoRNA MGP_129S1SvImJ_T0044291.1 MGP_129S1SvImJ_G0022790.1 mouse_genomes_project 16 35003576 35065857 - MGP_129S1SvImJ_P0044291 Cd86 protein_coding protein_coding MGP_129S1SvImJ_T0044292.1 MGP_129S1SvImJ_G0022790.1 mouse_genomes_project 16 35003604 35004227 - Cd86 protein_coding processed_transcript MGP_129S1SvImJ_T0044293.1 MGP_129S1SvImJ_G0022790.1 mouse_genomes_project 16 35020676 35042741 - MGP_129S1SvImJ_P0044293 Cd86 protein_coding protein_coding MGP_129S1SvImJ_T0044294.1 MGP_129S1SvImJ_G0022790.1 mouse_genomes_project 16 35060648 35065861 - Cd86 protein_coding processed_transcript MGP_129S1SvImJ_T0099516.1 MGP_129S1SvImJ_G0037583.1 mouse_genomes_project 16 34803158 34803265 + Gm22349 snRNA snRNA MGP_129S1SvImJ_T0044561.1 MGP_129S1SvImJ_G0022849.1 mouse_genomes_project 16 43935078 43966212 + MGP_129S1SvImJ_P0044561 Atg3 protein_coding protein_coding MGP_129S1SvImJ_T0044562.1 MGP_129S1SvImJ_G0022849.1 mouse_genomes_project 16 43942158 43965567 + Atg3 protein_coding retained_intron MGP_129S1SvImJ_T0010139.1 MGP_129S1SvImJ_G0008255.1 mouse_genomes_project 16 15582759 15582830 - Gm26219 miRNA miRNA MGP_129S1SvImJ_T0044995.1 MGP_129S1SvImJ_G0023000.1 mouse_genomes_project 16 89705779 89706083 - MGP_129S1SvImJ_P0044995 Krtap19-4 protein_coding protein_coding MGP_129S1SvImJ_T0044363.1 MGP_129S1SvImJ_G0022802.1 mouse_genomes_project 16 36047939 36107719 + MGP_129S1SvImJ_P0044363 Hgd protein_coding unknown_likely_coding MGP_129S1SvImJ_T0044364.1 MGP_129S1SvImJ_G0022802.1 mouse_genomes_project 16 36048363 36103702 + Hgd protein_coding processed_transcript MGP_129S1SvImJ_T0044365.1 MGP_129S1SvImJ_G0022802.1 mouse_genomes_project 16 36048367 36083829 + Hgd protein_coding retained_intron MGP_129S1SvImJ_T0044366.1 MGP_129S1SvImJ_G0022802.1 mouse_genomes_project 16 36048395 36087961 + Hgd protein_coding processed_transcript MGP_129S1SvImJ_T0044367.1 MGP_129S1SvImJ_G0022802.1 mouse_genomes_project 16 36093530 36103702 + Hgd protein_coding processed_transcript MGP_129S1SvImJ_T0006857.1 MGP_129S1SvImJ_G0005658.1 mouse_genomes_project 16 33814756 33822107 - 1600019K03Rik lincRNA lincRNA MGP_129S1SvImJ_T0000981.1 MGP_129S1SvImJ_G0000912.1 mouse_genomes_project 16 38916188 38916627 + TEC TEC MGP_129S1SvImJ_T0006847.1 MGP_129S1SvImJ_G0005648.1 mouse_genomes_project 16 19293732 19296058 - Gm26744 lincRNA lincRNA MGP_129S1SvImJ_T0010183.1 MGP_129S1SvImJ_G0008299.1 mouse_genomes_project 16 95391477 95391587 - Gm23062 miRNA miRNA MGP_129S1SvImJ_T0044624.1 MGP_129S1SvImJ_G0022868.1 mouse_genomes_project 16 47724883 47726793 + MGP_129S1SvImJ_P0044624 Retnla protein_coding protein_coding MGP_129S1SvImJ_T0043518.1 MGP_129S1SvImJ_G0022594.1 mouse_genomes_project 16 15022041 15078530 - protein_coding retained_intron MGP_129S1SvImJ_T0043519.1 MGP_129S1SvImJ_G0022594.1 mouse_genomes_project 16 15022914 15078536 - MGP_129S1SvImJ_P0043519 protein_coding protein_coding MGP_129S1SvImJ_T0043520.1 MGP_129S1SvImJ_G0022594.1 mouse_genomes_project 16 15022914 15078569 - MGP_129S1SvImJ_P0043520 protein_coding protein_coding MGP_129S1SvImJ_T0043521.1 MGP_129S1SvImJ_G0022594.1 mouse_genomes_project 16 15022920 15078533 - MGP_129S1SvImJ_P0043521 protein_coding protein_coding MGP_129S1SvImJ_T0043522.1 MGP_129S1SvImJ_G0022594.1 mouse_genomes_project 16 15023869 15078469 - MGP_129S1SvImJ_P0043522 protein_coding protein_coding MGP_129S1SvImJ_T0043523.1 MGP_129S1SvImJ_G0022594.1 mouse_genomes_project 16 15031870 15078525 - protein_coding retained_intron MGP_129S1SvImJ_T0043524.1 MGP_129S1SvImJ_G0022594.1 mouse_genomes_project 16 15040385 15080975 - protein_coding processed_transcript MGP_129S1SvImJ_T0043525.1 MGP_129S1SvImJ_G0022594.1 mouse_genomes_project 16 15079450 15081021 - protein_coding processed_transcript MGP_129S1SvImJ_T0044979.1 MGP_129S1SvImJ_G0022986.1 mouse_genomes_project 16 89437885 89438766 - MGP_129S1SvImJ_P0044979 2310079G19Rik protein_coding protein_coding MGP_129S1SvImJ_T0044626.1 MGP_129S1SvImJ_G0022870.1 mouse_genomes_project 16 47797377 47816722 - Dzip3 protein_coding retained_intron MGP_129S1SvImJ_T0044627.1 MGP_129S1SvImJ_G0022870.1 mouse_genomes_project 16 47797377 47874740 - MGP_129S1SvImJ_P0044627 Dzip3 protein_coding protein_coding MGP_129S1SvImJ_T0044628.1 MGP_129S1SvImJ_G0022870.1 mouse_genomes_project 16 47797379 47816630 - Dzip3 protein_coding retained_intron MGP_129S1SvImJ_T0044629.1 MGP_129S1SvImJ_G0022870.1 mouse_genomes_project 16 47799024 47874516 - MGP_129S1SvImJ_P0044629 Dzip3 protein_coding protein_coding MGP_129S1SvImJ_T0044630.1 MGP_129S1SvImJ_G0022870.1 mouse_genomes_project 16 47800011 47803837 - MGP_129S1SvImJ_P0044630 Dzip3 protein_coding protein_coding MGP_129S1SvImJ_T0044631.1 MGP_129S1SvImJ_G0022870.1 mouse_genomes_project 16 47800231 47805383 - Dzip3 protein_coding retained_intron MGP_129S1SvImJ_T0044632.1 MGP_129S1SvImJ_G0022870.1 mouse_genomes_project 16 47823596 47832024 - Dzip3 protein_coding retained_intron MGP_129S1SvImJ_T0044786.1 MGP_129S1SvImJ_G0022916.1 mouse_genomes_project 16 58238596 58239601 - MGP_129S1SvImJ_P0044786 Olfr186 protein_coding protein_coding MGP_129S1SvImJ_T0044787.1 MGP_129S1SvImJ_G0022916.1 mouse_genomes_project 16 58239193 58243528 - MGP_129S1SvImJ_P0044787 Olfr186 protein_coding protein_coding MGP_129S1SvImJ_T0000995.1 MGP_129S1SvImJ_G0000925.1 mouse_genomes_project 16 77686615 77689731 + TEC TEC MGP_129S1SvImJ_T0010130.1 MGP_129S1SvImJ_G0008246.1 mouse_genomes_project 16 10818868 10818957 + Gm27734 miRNA miRNA MGP_129S1SvImJ_T0006830.1 MGP_129S1SvImJ_G0005634.1 mouse_genomes_project 16 302613 327463 + Gm26675 lincRNA lincRNA MGP_129S1SvImJ_T0043844.1 MGP_129S1SvImJ_G0022669.1 mouse_genomes_project 16 19883368 19949035 - MGP_129S1SvImJ_P0043844 Etv5 protein_coding protein_coding MGP_129S1SvImJ_T0043845.1 MGP_129S1SvImJ_G0022669.1 mouse_genomes_project 16 19883375 19944834 - MGP_129S1SvImJ_P0043845 Etv5 protein_coding protein_coding MGP_129S1SvImJ_T0043846.1 MGP_129S1SvImJ_G0022669.1 mouse_genomes_project 16 19888052 19907450 - MGP_129S1SvImJ_P0043846 Etv5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043847.1 MGP_129S1SvImJ_G0022669.1 mouse_genomes_project 16 19907484 19948932 - Etv5 protein_coding processed_transcript MGP_129S1SvImJ_T0043848.1 MGP_129S1SvImJ_G0022669.1 mouse_genomes_project 16 19918558 19948886 - MGP_129S1SvImJ_P0043848 Etv5 protein_coding protein_coding MGP_129S1SvImJ_T0098522.1 MGP_129S1SvImJ_G0036607.1 mouse_genomes_project 16 47279608 47279727 - n-R5s36 rRNA rRNA MGP_129S1SvImJ_T0044370.1 MGP_129S1SvImJ_G0022804.1 mouse_genomes_project 16 36263500 36323636 + MGP_129S1SvImJ_P0044370 Fstl1 protein_coding protein_coding MGP_129S1SvImJ_T0044371.1 MGP_129S1SvImJ_G0022804.1 mouse_genomes_project 16 36263702 36280702 + Fstl1 protein_coding processed_transcript MGP_129S1SvImJ_T0044372.1 MGP_129S1SvImJ_G0022804.1 mouse_genomes_project 16 36263779 36306060 + Fstl1 protein_coding retained_intron MGP_129S1SvImJ_T0044373.1 MGP_129S1SvImJ_G0022804.1 mouse_genomes_project 16 36302817 36321547 + Fstl1 protein_coding processed_transcript MGP_129S1SvImJ_T0044374.1 MGP_129S1SvImJ_G0022804.1 mouse_genomes_project 16 36309858 36322746 + Fstl1 protein_coding processed_transcript MGP_129S1SvImJ_T0045390.1 MGP_129S1SvImJ_G0023095.1 mouse_genomes_project 16 99310549 99379994 - MGP_129S1SvImJ_P0045390 C2cd2 protein_coding protein_coding MGP_129S1SvImJ_T0044728.1 MGP_129S1SvImJ_G0022896.1 mouse_genomes_project 16 56320061 56378878 - MGP_129S1SvImJ_P0044728 Tbc1d23 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0044729.1 MGP_129S1SvImJ_G0022896.1 mouse_genomes_project 16 56320066 56378978 - MGP_129S1SvImJ_P0044729 Tbc1d23 protein_coding protein_coding MGP_129S1SvImJ_T0043982.1 MGP_129S1SvImJ_G0022710.1 mouse_genomes_project 16 28159017 28172984 - MGP_129S1SvImJ_P0043982 Lrrc15 protein_coding protein_coding MGP_129S1SvImJ_T0043086.1 MGP_129S1SvImJ_G0022499.1 mouse_genomes_project 16 5361882 5470815 - MGP_129S1SvImJ_P0043086 Usp7 protein_coding protein_coding MGP_129S1SvImJ_T0043087.1 MGP_129S1SvImJ_G0022499.1 mouse_genomes_project 16 5361887 5411767 - MGP_129S1SvImJ_P0043087 Usp7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043088.1 MGP_129S1SvImJ_G0022499.1 mouse_genomes_project 16 5362433 5411756 - MGP_129S1SvImJ_P0043088 Usp7 protein_coding protein_coding MGP_129S1SvImJ_T0043089.1 MGP_129S1SvImJ_G0022499.1 mouse_genomes_project 16 5363067 5393950 - Usp7 protein_coding processed_transcript MGP_129S1SvImJ_T0043090.1 MGP_129S1SvImJ_G0022499.1 mouse_genomes_project 16 5368464 5371118 - Usp7 protein_coding retained_intron MGP_129S1SvImJ_T0043091.1 MGP_129S1SvImJ_G0022499.1 mouse_genomes_project 16 5368964 5369869 - Usp7 protein_coding retained_intron MGP_129S1SvImJ_T0043092.1 MGP_129S1SvImJ_G0022499.1 mouse_genomes_project 16 5369763 5370820 - Usp7 protein_coding retained_intron MGP_129S1SvImJ_T0043093.1 MGP_129S1SvImJ_G0022499.1 mouse_genomes_project 16 5369938 5379023 - MGP_129S1SvImJ_P0043093 Usp7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043094.1 MGP_129S1SvImJ_G0022499.1 mouse_genomes_project 16 5372444 5376075 - Usp7 protein_coding retained_intron MGP_129S1SvImJ_T0043095.1 MGP_129S1SvImJ_G0022499.1 mouse_genomes_project 16 5375759 5379221 - Usp7 protein_coding retained_intron MGP_129S1SvImJ_T0043096.1 MGP_129S1SvImJ_G0022499.1 mouse_genomes_project 16 5377238 5377603 - Usp7 protein_coding retained_intron MGP_129S1SvImJ_T0043097.1 MGP_129S1SvImJ_G0022499.1 mouse_genomes_project 16 5377247 5378513 - Usp7 protein_coding retained_intron MGP_129S1SvImJ_T0043098.1 MGP_129S1SvImJ_G0022499.1 mouse_genomes_project 16 5378253 5379122 - Usp7 protein_coding retained_intron MGP_129S1SvImJ_T0043927.1 MGP_129S1SvImJ_G0022693.1 mouse_genomes_project 16 24073835 24089804 - MGP_129S1SvImJ_P0043927 Cldn1 protein_coding protein_coding MGP_129S1SvImJ_T0100797.1 MGP_129S1SvImJ_G0038864.1 mouse_genomes_project 16 57054776 57054908 - Gm24039 snoRNA snoRNA MGP_129S1SvImJ_T0044169.1 MGP_129S1SvImJ_G0022751.1 mouse_genomes_project 16 31210478 31214215 + MGP_129S1SvImJ_P0044169 Rpl35a protein_coding protein_coding MGP_129S1SvImJ_T0044170.1 MGP_129S1SvImJ_G0022751.1 mouse_genomes_project 16 31210491 31214202 + MGP_129S1SvImJ_P0044170 Rpl35a protein_coding protein_coding MGP_129S1SvImJ_T0044171.1 MGP_129S1SvImJ_G0022751.1 mouse_genomes_project 16 31210507 31214201 + Rpl35a protein_coding retained_intron MGP_129S1SvImJ_T0044172.1 MGP_129S1SvImJ_G0022751.1 mouse_genomes_project 16 31210549 31211556 + Rpl35a protein_coding retained_intron MGP_129S1SvImJ_T0044173.1 MGP_129S1SvImJ_G0022751.1 mouse_genomes_project 16 31210552 31214191 + MGP_129S1SvImJ_P0044173 Rpl35a protein_coding protein_coding MGP_129S1SvImJ_T0044174.1 MGP_129S1SvImJ_G0022751.1 mouse_genomes_project 16 31210831 31214201 + MGP_129S1SvImJ_P0044174 Rpl35a protein_coding protein_coding MGP_129S1SvImJ_T0044175.1 MGP_129S1SvImJ_G0022751.1 mouse_genomes_project 16 31211043 31214182 + MGP_129S1SvImJ_P0044175 Rpl35a protein_coding protein_coding MGP_129S1SvImJ_T0043998.1 MGP_129S1SvImJ_G0022714.1 mouse_genomes_project 16 28470816 28501863 - MGP_129S1SvImJ_P0043998 Lsg1 protein_coding protein_coding MGP_129S1SvImJ_T0043999.1 MGP_129S1SvImJ_G0022714.1 mouse_genomes_project 16 28471693 28501860 - MGP_129S1SvImJ_P0043999 Lsg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044000.1 MGP_129S1SvImJ_G0022714.1 mouse_genomes_project 16 28475000 28501834 - Lsg1 protein_coding retained_intron MGP_129S1SvImJ_T0044001.1 MGP_129S1SvImJ_G0022714.1 mouse_genomes_project 16 28475352 28480785 - Lsg1 protein_coding retained_intron MGP_129S1SvImJ_T0044002.1 MGP_129S1SvImJ_G0022714.1 mouse_genomes_project 16 28480688 28501863 - Lsg1 protein_coding retained_intron MGP_129S1SvImJ_T0044003.1 MGP_129S1SvImJ_G0022714.1 mouse_genomes_project 16 28484046 28499921 - MGP_129S1SvImJ_P0044003 Lsg1 protein_coding protein_coding MGP_129S1SvImJ_T0044004.1 MGP_129S1SvImJ_G0022714.1 mouse_genomes_project 16 28485984 28501845 - Lsg1 protein_coding retained_intron MGP_129S1SvImJ_T0044005.1 MGP_129S1SvImJ_G0022714.1 mouse_genomes_project 16 28494923 28501810 - Lsg1 protein_coding retained_intron MGP_129S1SvImJ_T0000043.1 MGP_129S1SvImJ_G0000036.1 mouse_genomes_project 16 16480689 16480727 - MGP_129S1SvImJ_P0000043 Iglj2 IG_J_gene IG_J_gene MGP_129S1SvImJ_T0045085.1 MGP_129S1SvImJ_G0023035.1 mouse_genomes_project 16 92162990 92166196 - MGP_129S1SvImJ_P0045085 Gm9881 protein_coding protein_coding MGP_129S1SvImJ_T0013206.1 MGP_129S1SvImJ_G0011295.1 mouse_genomes_project 16 56063355 56064298 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100802.1 MGP_129S1SvImJ_G0038869.1 mouse_genomes_project 16 71511641 71511772 + Gm22797 snoRNA snoRNA MGP_129S1SvImJ_T0045140.1 MGP_129S1SvImJ_G0023049.1 mouse_genomes_project 16 92719831 92763218 - MGP_129S1SvImJ_P0045140 Cryzl1 protein_coding protein_coding MGP_129S1SvImJ_T0045141.1 MGP_129S1SvImJ_G0023049.1 mouse_genomes_project 16 92719851 92763045 - MGP_129S1SvImJ_P0045141 Cryzl1 protein_coding protein_coding MGP_129S1SvImJ_T0045142.1 MGP_129S1SvImJ_G0023049.1 mouse_genomes_project 16 92720035 92724531 - Cryzl1 protein_coding processed_transcript MGP_129S1SvImJ_T0045143.1 MGP_129S1SvImJ_G0023049.1 mouse_genomes_project 16 92720115 92762866 - MGP_129S1SvImJ_P0045143 Cryzl1 protein_coding protein_coding MGP_129S1SvImJ_T0045144.1 MGP_129S1SvImJ_G0023049.1 mouse_genomes_project 16 92723699 92742189 - MGP_129S1SvImJ_P0045144 Cryzl1 protein_coding protein_coding MGP_129S1SvImJ_T0045145.1 MGP_129S1SvImJ_G0023049.1 mouse_genomes_project 16 92723725 92751675 - MGP_129S1SvImJ_P0045145 Cryzl1 protein_coding protein_coding MGP_129S1SvImJ_T0045146.1 MGP_129S1SvImJ_G0023049.1 mouse_genomes_project 16 92726819 92762944 - MGP_129S1SvImJ_P0045146 Cryzl1 protein_coding protein_coding MGP_129S1SvImJ_T0045147.1 MGP_129S1SvImJ_G0023049.1 mouse_genomes_project 16 92727072 92731662 - Cryzl1 protein_coding retained_intron MGP_129S1SvImJ_T0045148.1 MGP_129S1SvImJ_G0023049.1 mouse_genomes_project 16 92740331 92762843 - Cryzl1 protein_coding retained_intron MGP_129S1SvImJ_T0045149.1 MGP_129S1SvImJ_G0023049.1 mouse_genomes_project 16 92749398 92762851 - Cryzl1 protein_coding processed_transcript MGP_129S1SvImJ_T0043332.1 MGP_129S1SvImJ_G0022561.1 mouse_genomes_project 16 13951664 13954979 - MGP_129S1SvImJ_P0043332 Igll1 protein_coding protein_coding MGP_129S1SvImJ_T0043333.1 MGP_129S1SvImJ_G0022561.1 mouse_genomes_project 16 13951664 13954811 - MGP_129S1SvImJ_P0043333 Igll1 protein_coding protein_coding MGP_129S1SvImJ_T0043334.1 MGP_129S1SvImJ_G0022561.1 mouse_genomes_project 16 13951667 13954979 - Igll1 protein_coding retained_intron MGP_129S1SvImJ_T0013178.1 MGP_129S1SvImJ_G0011267.1 mouse_genomes_project 16 29923737 29924617 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0044027.1 MGP_129S1SvImJ_G0022721.1 mouse_genomes_project 16 29654532 29868922 + MGP_129S1SvImJ_P0044027 Dlg1 protein_coding protein_coding MGP_129S1SvImJ_T0044028.1 MGP_129S1SvImJ_G0022721.1 mouse_genomes_project 16 29654998 29867547 + MGP_129S1SvImJ_P0044028 Dlg1 protein_coding protein_coding MGP_129S1SvImJ_T0044029.1 MGP_129S1SvImJ_G0022721.1 mouse_genomes_project 16 29655024 29868928 + MGP_129S1SvImJ_P0044029 Dlg1 protein_coding protein_coding MGP_129S1SvImJ_T0044030.1 MGP_129S1SvImJ_G0022721.1 mouse_genomes_project 16 29655044 29868921 + MGP_129S1SvImJ_P0044030 Dlg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044031.1 MGP_129S1SvImJ_G0022721.1 mouse_genomes_project 16 29655128 29868918 + MGP_129S1SvImJ_P0044031 Dlg1 protein_coding protein_coding MGP_129S1SvImJ_T0044032.1 MGP_129S1SvImJ_G0022721.1 mouse_genomes_project 16 29655239 29868385 + MGP_129S1SvImJ_P0044032 Dlg1 protein_coding protein_coding MGP_129S1SvImJ_T0044033.1 MGP_129S1SvImJ_G0022721.1 mouse_genomes_project 16 29675896 29769405 + Dlg1 protein_coding retained_intron MGP_129S1SvImJ_T0044034.1 MGP_129S1SvImJ_G0022721.1 mouse_genomes_project 16 29747240 29867962 + MGP_129S1SvImJ_P0044034 Dlg1 protein_coding protein_coding MGP_129S1SvImJ_T0044035.1 MGP_129S1SvImJ_G0022721.1 mouse_genomes_project 16 29787910 29836930 + MGP_129S1SvImJ_P0044035 Dlg1 protein_coding protein_coding MGP_129S1SvImJ_T0044036.1 MGP_129S1SvImJ_G0022721.1 mouse_genomes_project 16 29820603 29830603 + Dlg1 protein_coding retained_intron MGP_129S1SvImJ_T0044037.1 MGP_129S1SvImJ_G0022721.1 mouse_genomes_project 16 29830381 29853694 + MGP_129S1SvImJ_P0044037 Dlg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044038.1 MGP_129S1SvImJ_G0022721.1 mouse_genomes_project 16 29832270 29846685 + Dlg1 protein_coding processed_transcript MGP_129S1SvImJ_T0044039.1 MGP_129S1SvImJ_G0022721.1 mouse_genomes_project 16 29841434 29853649 + Dlg1 protein_coding retained_intron MGP_129S1SvImJ_T0044040.1 MGP_129S1SvImJ_G0022721.1 mouse_genomes_project 16 29848210 29858916 + Dlg1 protein_coding retained_intron MGP_129S1SvImJ_T0044041.1 MGP_129S1SvImJ_G0022721.1 mouse_genomes_project 16 29863185 29867549 + Dlg1 protein_coding retained_intron MGP_129S1SvImJ_T0043048.1 MGP_129S1SvImJ_G0022487.1 mouse_genomes_project 16 1746557 1757030 - MGP_129S1SvImJ_P0043048 AU021092 protein_coding protein_coding MGP_129S1SvImJ_T0099521.1 MGP_129S1SvImJ_G0037588.1 mouse_genomes_project 16 41824106 41824213 + Gm25873 snRNA snRNA MGP_129S1SvImJ_T0043660.1 MGP_129S1SvImJ_G0022626.1 mouse_genomes_project 16 16683477 16684419 - MGP_129S1SvImJ_P0043660 Olfr165 protein_coding protein_coding MGP_129S1SvImJ_T0006894.1 MGP_129S1SvImJ_G0005683.1 mouse_genomes_project 16 97139306 97141595 - 2810404F17Rik lincRNA lincRNA MGP_129S1SvImJ_T0006860.1 MGP_129S1SvImJ_G0005661.1 mouse_genomes_project 16 42042546 42060327 - Gm9968 lincRNA lincRNA MGP_129S1SvImJ_T0100811.1 MGP_129S1SvImJ_G0038878.1 mouse_genomes_project 16 88134563 88134699 - Gm25896 snoRNA snoRNA MGP_129S1SvImJ_T0099540.1 MGP_129S1SvImJ_G0037607.1 mouse_genomes_project 16 95669229 95669389 + Gm23692 snRNA snRNA MGP_129S1SvImJ_T0044851.1 MGP_129S1SvImJ_G0022947.1 mouse_genomes_project 16 66232929 67281478 - MGP_129S1SvImJ_P0044851 Cadm2 protein_coding protein_coding MGP_129S1SvImJ_T0044852.1 MGP_129S1SvImJ_G0022947.1 mouse_genomes_project 16 66239255 67281393 - MGP_129S1SvImJ_P0044852 Cadm2 protein_coding protein_coding MGP_129S1SvImJ_T0044853.1 MGP_129S1SvImJ_G0022947.1 mouse_genomes_project 16 66239700 67281478 - MGP_129S1SvImJ_P0044853 Cadm2 protein_coding protein_coding MGP_129S1SvImJ_T0044854.1 MGP_129S1SvImJ_G0022947.1 mouse_genomes_project 16 66240603 66547618 - MGP_129S1SvImJ_P0044854 Cadm2 protein_coding protein_coding MGP_129S1SvImJ_T0044855.1 MGP_129S1SvImJ_G0022947.1 mouse_genomes_project 16 66366044 67281063 - MGP_129S1SvImJ_P0044855 Cadm2 protein_coding protein_coding MGP_129S1SvImJ_T0044856.1 MGP_129S1SvImJ_G0022947.1 mouse_genomes_project 16 66394152 66514755 - Cadm2 protein_coding processed_transcript MGP_129S1SvImJ_T0003668.1 MGP_129S1SvImJ_G0003320.1 mouse_genomes_project 16 490956 495637 - Gm15879 antisense antisense MGP_129S1SvImJ_T0003669.1 MGP_129S1SvImJ_G0003320.1 mouse_genomes_project 16 492488 495965 - Gm15879 antisense antisense MGP_129S1SvImJ_T0044668.1 MGP_129S1SvImJ_G0022879.1 mouse_genomes_project 16 54292111 54352739 - MGP_129S1SvImJ_P0044668 Zpld1 protein_coding protein_coding MGP_129S1SvImJ_T0044669.1 MGP_129S1SvImJ_G0022879.1 mouse_genomes_project 16 54292111 54369555 - MGP_129S1SvImJ_P0044669 Zpld1 protein_coding protein_coding MGP_129S1SvImJ_T0044047.1 MGP_129S1SvImJ_G0022724.1 mouse_genomes_project 16 29950038 29951483 - MGP_129S1SvImJ_P0044047 0610012G03Rik protein_coding protein_coding MGP_129S1SvImJ_T0043163.1 MGP_129S1SvImJ_G0022521.1 mouse_genomes_project 16 7987947 8032247 - MGP_129S1SvImJ_P0043163 Zc3h7a protein_coding protein_coding MGP_129S1SvImJ_T0043164.1 MGP_129S1SvImJ_G0022521.1 mouse_genomes_project 16 7988481 7992243 - Zc3h7a protein_coding retained_intron MGP_129S1SvImJ_T0043165.1 MGP_129S1SvImJ_G0022521.1 mouse_genomes_project 16 7990398 7993259 - Zc3h7a protein_coding retained_intron MGP_129S1SvImJ_T0043166.1 MGP_129S1SvImJ_G0022521.1 mouse_genomes_project 16 7992066 8002174 - MGP_129S1SvImJ_P0043166 Zc3h7a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043167.1 MGP_129S1SvImJ_G0022521.1 mouse_genomes_project 16 7992160 8032195 - MGP_129S1SvImJ_P0043167 Zc3h7a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043168.1 MGP_129S1SvImJ_G0022521.1 mouse_genomes_project 16 7998875 8031954 - MGP_129S1SvImJ_P0043168 Zc3h7a protein_coding protein_coding MGP_129S1SvImJ_T0043169.1 MGP_129S1SvImJ_G0022521.1 mouse_genomes_project 16 7999061 8001026 - Zc3h7a protein_coding retained_intron MGP_129S1SvImJ_T0043170.1 MGP_129S1SvImJ_G0022521.1 mouse_genomes_project 16 8001027 8005071 - Zc3h7a protein_coding retained_intron MGP_129S1SvImJ_T0043171.1 MGP_129S1SvImJ_G0022521.1 mouse_genomes_project 16 8002176 8030831 - MGP_129S1SvImJ_P0043171 Zc3h7a protein_coding protein_coding MGP_129S1SvImJ_T0043172.1 MGP_129S1SvImJ_G0022521.1 mouse_genomes_project 16 8003944 8004875 - Zc3h7a protein_coding retained_intron MGP_129S1SvImJ_T0043173.1 MGP_129S1SvImJ_G0022521.1 mouse_genomes_project 16 8004936 8006401 - Zc3h7a protein_coding retained_intron MGP_129S1SvImJ_T0043174.1 MGP_129S1SvImJ_G0022521.1 mouse_genomes_project 16 8005329 8009718 - Zc3h7a protein_coding retained_intron MGP_129S1SvImJ_T0043175.1 MGP_129S1SvImJ_G0022521.1 mouse_genomes_project 16 8006667 8013224 - Zc3h7a protein_coding retained_intron MGP_129S1SvImJ_T0043176.1 MGP_129S1SvImJ_G0022521.1 mouse_genomes_project 16 8007836 8013246 - Zc3h7a protein_coding retained_intron MGP_129S1SvImJ_T0043177.1 MGP_129S1SvImJ_G0022521.1 mouse_genomes_project 16 8010169 8030798 - MGP_129S1SvImJ_P0043177 Zc3h7a protein_coding protein_coding MGP_129S1SvImJ_T0043178.1 MGP_129S1SvImJ_G0022521.1 mouse_genomes_project 16 8015542 8031419 - MGP_129S1SvImJ_P0043178 Zc3h7a protein_coding protein_coding MGP_129S1SvImJ_T0043179.1 MGP_129S1SvImJ_G0022521.1 mouse_genomes_project 16 8015552 8031918 - MGP_129S1SvImJ_P0043179 Zc3h7a protein_coding protein_coding MGP_129S1SvImJ_T0043180.1 MGP_129S1SvImJ_G0022521.1 mouse_genomes_project 16 8017965 8032196 - Zc3h7a protein_coding retained_intron MGP_129S1SvImJ_T0099491.1 MGP_129S1SvImJ_G0037558.1 mouse_genomes_project 16 5443646 5443754 - Gm25805 snRNA snRNA MGP_129S1SvImJ_T0044102.1 MGP_129S1SvImJ_G0022742.1 mouse_genomes_project 16 30702622 30726429 + MGP_129S1SvImJ_P0044102 Tfrc protein_coding protein_coding MGP_129S1SvImJ_T0044103.1 MGP_129S1SvImJ_G0022742.1 mouse_genomes_project 16 30702685 30717376 + MGP_129S1SvImJ_P0044103 Tfrc protein_coding protein_coding MGP_129S1SvImJ_T0044104.1 MGP_129S1SvImJ_G0022742.1 mouse_genomes_project 16 30702952 30706929 + MGP_129S1SvImJ_P0044104 Tfrc protein_coding protein_coding MGP_129S1SvImJ_T0044105.1 MGP_129S1SvImJ_G0022742.1 mouse_genomes_project 16 30708926 30710912 + Tfrc protein_coding retained_intron MGP_129S1SvImJ_T0044106.1 MGP_129S1SvImJ_G0022742.1 mouse_genomes_project 16 30712034 30714637 + Tfrc protein_coding retained_intron MGP_129S1SvImJ_T0044107.1 MGP_129S1SvImJ_G0022742.1 mouse_genomes_project 16 30718076 30726425 + Tfrc protein_coding retained_intron MGP_129S1SvImJ_T0043259.1 MGP_129S1SvImJ_G0022539.1 mouse_genomes_project 16 11004559 11009423 - MGP_129S1SvImJ_P0043259 Ifitm7 protein_coding protein_coding MGP_129S1SvImJ_T0043260.1 MGP_129S1SvImJ_G0022539.1 mouse_genomes_project 16 11005656 11007479 - MGP_129S1SvImJ_P0043260 Ifitm7 protein_coding protein_coding MGP_129S1SvImJ_T0043658.1 MGP_129S1SvImJ_G0022624.1 mouse_genomes_project 16 16571488 16572583 - MGP_129S1SvImJ_P0043658 Olfr164 protein_coding protein_coding MGP_129S1SvImJ_T0043849.1 MGP_129S1SvImJ_G0022670.1 mouse_genomes_project 16 19978351 20172072 - MGP_129S1SvImJ_P0043849 Dgkg protein_coding protein_coding MGP_129S1SvImJ_T0043850.1 MGP_129S1SvImJ_G0022670.1 mouse_genomes_project 16 19979112 20172120 - MGP_129S1SvImJ_P0043850 Dgkg protein_coding protein_coding MGP_129S1SvImJ_T0043851.1 MGP_129S1SvImJ_G0022670.1 mouse_genomes_project 16 20059491 20172087 - MGP_129S1SvImJ_P0043851 Dgkg protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043852.1 MGP_129S1SvImJ_G0022670.1 mouse_genomes_project 16 20108042 20171927 - Dgkg protein_coding processed_transcript MGP_129S1SvImJ_T0042962.1 MGP_129S1SvImJ_G0022464.1 mouse_genomes_project 16 1030263 1044857 - MGP_129S1SvImJ_P0042962 Tfap4 protein_coding protein_coding MGP_129S1SvImJ_T0099530.1 MGP_129S1SvImJ_G0037597.1 mouse_genomes_project 16 63199737 63199835 - Gm22769 snRNA snRNA MGP_129S1SvImJ_T0044259.1 MGP_129S1SvImJ_G0022775.1 mouse_genomes_project 16 34337427 34365565 + Kpna1 protein_coding retained_intron MGP_129S1SvImJ_T0044260.1 MGP_129S1SvImJ_G0022775.1 mouse_genomes_project 16 34343998 34404731 + MGP_129S1SvImJ_P0044260 Kpna1 protein_coding protein_coding MGP_129S1SvImJ_T0044261.1 MGP_129S1SvImJ_G0022775.1 mouse_genomes_project 16 34344008 34367345 + Kpna1 protein_coding retained_intron MGP_129S1SvImJ_T0044262.1 MGP_129S1SvImJ_G0022775.1 mouse_genomes_project 16 34344037 34385764 + MGP_129S1SvImJ_P0044262 Kpna1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044263.1 MGP_129S1SvImJ_G0022775.1 mouse_genomes_project 16 34344265 34379397 + MGP_129S1SvImJ_P0044263 Kpna1 protein_coding protein_coding MGP_129S1SvImJ_T0044264.1 MGP_129S1SvImJ_G0022775.1 mouse_genomes_project 16 34362380 34401508 + MGP_129S1SvImJ_P0044264 Kpna1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044265.1 MGP_129S1SvImJ_G0022775.1 mouse_genomes_project 16 34362446 34388138 + MGP_129S1SvImJ_P0044265 Kpna1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044266.1 MGP_129S1SvImJ_G0022775.1 mouse_genomes_project 16 34380280 34402731 + MGP_129S1SvImJ_P0044266 Kpna1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044267.1 MGP_129S1SvImJ_G0022775.1 mouse_genomes_project 16 34385863 34401468 + MGP_129S1SvImJ_P0044267 Kpna1 protein_coding protein_coding MGP_129S1SvImJ_T0044268.1 MGP_129S1SvImJ_G0022775.1 mouse_genomes_project 16 34388136 34399374 + Kpna1 protein_coding retained_intron MGP_129S1SvImJ_T0011424.1 MGP_129S1SvImJ_G0009540.1 mouse_genomes_project 16 4852165 4852439 + Gm23476 misc_RNA misc_RNA MGP_129S1SvImJ_T0003713.1 MGP_129S1SvImJ_G0003356.1 mouse_genomes_project 16 66480510 66488985 + 4933411O13Rik antisense antisense MGP_129S1SvImJ_T0003714.1 MGP_129S1SvImJ_G0003356.1 mouse_genomes_project 16 66480516 66499303 + 4933411O13Rik antisense antisense MGP_129S1SvImJ_T0044270.1 MGP_129S1SvImJ_G0022777.1 mouse_genomes_project 16 34411442 34441403 - MGP_129S1SvImJ_P0044270 Fam162a protein_coding protein_coding MGP_129S1SvImJ_T0099504.1 MGP_129S1SvImJ_G0037571.1 mouse_genomes_project 16 21008652 21008723 + Gm23066 snRNA snRNA MGP_129S1SvImJ_T0043230.1 MGP_129S1SvImJ_G0022536.1 mouse_genomes_project 16 10818887 10848400 + MGP_129S1SvImJ_P0043230 Ntan1 protein_coding protein_coding MGP_129S1SvImJ_T0043231.1 MGP_129S1SvImJ_G0022536.1 mouse_genomes_project 16 10818913 10835396 + Ntan1 protein_coding processed_transcript MGP_129S1SvImJ_T0043232.1 MGP_129S1SvImJ_G0022536.1 mouse_genomes_project 16 10818935 10835513 + Ntan1 protein_coding processed_transcript MGP_129S1SvImJ_T0043233.1 MGP_129S1SvImJ_G0022536.1 mouse_genomes_project 16 10818942 10848397 + Ntan1 protein_coding processed_transcript MGP_129S1SvImJ_T0043234.1 MGP_129S1SvImJ_G0022536.1 mouse_genomes_project 16 10818980 10830509 + Ntan1 protein_coding retained_intron MGP_129S1SvImJ_T0043235.1 MGP_129S1SvImJ_G0022536.1 mouse_genomes_project 16 10818992 10847325 + MGP_129S1SvImJ_P0043235 Ntan1 protein_coding protein_coding MGP_129S1SvImJ_T0043236.1 MGP_129S1SvImJ_G0022536.1 mouse_genomes_project 16 10834568 10835659 + Ntan1 protein_coding retained_intron MGP_129S1SvImJ_T0043239.1 MGP_129S1SvImJ_G0022536.1 mouse_genomes_project 16 10846092 10848115 + Ntan1 protein_coding retained_intron MGP_129S1SvImJ_T0044082.1 MGP_129S1SvImJ_G0022732.1 mouse_genomes_project 16 30279622 30299943 - MGP_129S1SvImJ_P0044082 Fbxo45 protein_coding protein_coding MGP_129S1SvImJ_T0010159.1 MGP_129S1SvImJ_G0008275.1 mouse_genomes_project 16 42509251 42509368 + Gm25996 miRNA miRNA MGP_129S1SvImJ_T0045001.1 MGP_129S1SvImJ_G0023006.1 mouse_genomes_project 16 89831755 89832325 + MGP_129S1SvImJ_P0045001 Gm10229 protein_coding protein_coding MGP_129S1SvImJ_T0044224.1 MGP_129S1SvImJ_G0022762.1 mouse_genomes_project 16 32930486 32959263 + MGP_129S1SvImJ_P0044224 Ropn1 protein_coding protein_coding MGP_129S1SvImJ_T0044225.1 MGP_129S1SvImJ_G0022762.1 mouse_genomes_project 16 32931753 32960681 + MGP_129S1SvImJ_P0044225 Ropn1 protein_coding protein_coding MGP_129S1SvImJ_T0044832.1 MGP_129S1SvImJ_G0022937.1 mouse_genomes_project 16 62261270 62342071 + MGP_129S1SvImJ_P0044832 Pros1 protein_coding protein_coding MGP_129S1SvImJ_T0044833.1 MGP_129S1SvImJ_G0022937.1 mouse_genomes_project 16 62308087 62310258 + Pros1 protein_coding retained_intron MGP_129S1SvImJ_T0044834.1 MGP_129S1SvImJ_G0022937.1 mouse_genomes_project 16 62334209 62341115 + Pros1 protein_coding processed_transcript MGP_129S1SvImJ_T0044347.1 MGP_129S1SvImJ_G0022799.1 mouse_genomes_project 16 35544329 35846441 - MGP_129S1SvImJ_P0044347 protein_coding protein_coding MGP_129S1SvImJ_T0044348.1 MGP_129S1SvImJ_G0022799.1 mouse_genomes_project 16 35544655 35846441 - MGP_129S1SvImJ_P0044348 protein_coding protein_coding MGP_129S1SvImJ_T0044349.1 MGP_129S1SvImJ_G0022799.1 mouse_genomes_project 16 35545043 35846480 - MGP_129S1SvImJ_P0044349 protein_coding protein_coding MGP_129S1SvImJ_T0044350.1 MGP_129S1SvImJ_G0022799.1 mouse_genomes_project 16 35545043 35846476 - MGP_129S1SvImJ_P0044350 protein_coding protein_coding MGP_129S1SvImJ_T0044351.1 MGP_129S1SvImJ_G0022799.1 mouse_genomes_project 16 35565281 35846441 - MGP_129S1SvImJ_P0044351 protein_coding protein_coding MGP_129S1SvImJ_T0044352.1 MGP_129S1SvImJ_G0022799.1 mouse_genomes_project 16 35589969 35638019 - protein_coding processed_transcript MGP_129S1SvImJ_T0044353.1 MGP_129S1SvImJ_G0022799.1 mouse_genomes_project 16 35647717 35846441 - MGP_129S1SvImJ_P0044353 protein_coding protein_coding MGP_129S1SvImJ_T0044354.1 MGP_129S1SvImJ_G0022799.1 mouse_genomes_project 16 35770899 35846441 - protein_coding retained_intron MGP_129S1SvImJ_T0044355.1 MGP_129S1SvImJ_G0022799.1 mouse_genomes_project 16 35835634 35846476 - protein_coding processed_transcript MGP_129S1SvImJ_T0044356.1 MGP_129S1SvImJ_G0022799.1 mouse_genomes_project 16 35844368 35846441 - protein_coding retained_intron MGP_129S1SvImJ_T0045309.1 MGP_129S1SvImJ_G0023077.1 mouse_genomes_project 16 97031230 97051566 + MGP_129S1SvImJ_P0045309 Ets2 protein_coding protein_coding MGP_129S1SvImJ_T0045310.1 MGP_129S1SvImJ_G0023077.1 mouse_genomes_project 16 97031610 97039490 + Ets2 protein_coding retained_intron MGP_129S1SvImJ_T0045311.1 MGP_129S1SvImJ_G0023077.1 mouse_genomes_project 16 97031655 97041891 + Ets2 protein_coding retained_intron MGP_129S1SvImJ_T0045312.1 MGP_129S1SvImJ_G0023077.1 mouse_genomes_project 16 97035488 97046587 + MGP_129S1SvImJ_P0045312 Ets2 protein_coding protein_coding MGP_129S1SvImJ_T0045313.1 MGP_129S1SvImJ_G0023077.1 mouse_genomes_project 16 97046368 97049637 + Ets2 protein_coding retained_intron MGP_129S1SvImJ_T0099539.1 MGP_129S1SvImJ_G0037606.1 mouse_genomes_project 16 93106608 93106706 + Gm23210 snRNA snRNA MGP_129S1SvImJ_T0044881.1 MGP_129S1SvImJ_G0022954.1 mouse_genomes_project 16 75772475 75784098 - MGP_129S1SvImJ_P0044881 Hspa13 protein_coding protein_coding MGP_129S1SvImJ_T0044882.1 MGP_129S1SvImJ_G0022954.1 mouse_genomes_project 16 75773925 75784068 - MGP_129S1SvImJ_P0044882 Hspa13 protein_coding protein_coding MGP_129S1SvImJ_T0044883.1 MGP_129S1SvImJ_G0022954.1 mouse_genomes_project 16 75776473 75784059 - Hspa13 protein_coding retained_intron MGP_129S1SvImJ_T0044895.1 MGP_129S1SvImJ_G0022957.1 mouse_genomes_project 16 77119009 77227067 + MGP_129S1SvImJ_P0044895 Usp25 protein_coding protein_coding MGP_129S1SvImJ_T0044625.1 MGP_129S1SvImJ_G0022869.1 mouse_genomes_project 16 47749448 47751339 + MGP_129S1SvImJ_P0044625 Retnlg protein_coding protein_coding MGP_129S1SvImJ_T0102272.1 MGP_129S1SvImJ_G0040106.1 mouse_genomes_project 16 34508173 34509865 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0043140.1 MGP_129S1SvImJ_G0022511.1 mouse_genomes_project 16 7611168 7612897 - MGP_129S1SvImJ_P0043140 Socs1 protein_coding protein_coding MGP_129S1SvImJ_T0098328.1 MGP_129S1SvImJ_G0036413.1 mouse_genomes_project 16 89580392 89581022 + pseudogene pseudogene MGP_129S1SvImJ_T0003684.1 MGP_129S1SvImJ_G0003334.1 mouse_genomes_project 16 23669538 23673406 + Gm4524 antisense antisense MGP_129S1SvImJ_T0003690.1 MGP_129S1SvImJ_G0003339.1 mouse_genomes_project 16 31995148 32012995 - Gm15658 antisense antisense MGP_129S1SvImJ_T0044835.1 MGP_129S1SvImJ_G0022938.1 mouse_genomes_project 16 62990801 63325086 - MGP_129S1SvImJ_P0044835 Epha3 protein_coding protein_coding MGP_129S1SvImJ_T0006897.1 MGP_129S1SvImJ_G0005685.1 mouse_genomes_project 16 97237761 97239092 + Gm15340 lincRNA lincRNA MGP_129S1SvImJ_T0044800.1 MGP_129S1SvImJ_G0022926.1 mouse_genomes_project 16 58551712 58552636 - MGP_129S1SvImJ_P0044800 Olfr202 protein_coding protein_coding MGP_129S1SvImJ_T0099526.1 MGP_129S1SvImJ_G0037593.1 mouse_genomes_project 16 54037643 54037750 + Gm22977 snRNA snRNA MGP_129S1SvImJ_T0044980.1 MGP_129S1SvImJ_G0022987.1 mouse_genomes_project 16 89459431 89460404 - MGP_129S1SvImJ_P0044980 Krtap26-1 protein_coding protein_coding MGP_129S1SvImJ_T0044989.1 MGP_129S1SvImJ_G0022996.1 mouse_genomes_project 16 89637693 89646914 + MGP_129S1SvImJ_P0044989 Krtap15 protein_coding protein_coding MGP_129S1SvImJ_T0044991.1 MGP_129S1SvImJ_G0022996.1 mouse_genomes_project 16 89646423 89647274 + MGP_129S1SvImJ_P0044991 Krtap15 protein_coding protein_coding MGP_129S1SvImJ_T0043865.1 MGP_129S1SvImJ_G0022676.1 mouse_genomes_project 16 20482410 20492994 + MGP_129S1SvImJ_P0043865 Hrg protein_coding protein_coding MGP_129S1SvImJ_T0098706.1 MGP_129S1SvImJ_G0036791.1 mouse_genomes_project 16 31307202 31307601 - Gm23916 ribozyme ribozyme MGP_129S1SvImJ_T0000997.1 MGP_129S1SvImJ_G0000927.1 mouse_genomes_project 16 77778332 77781374 + TEC TEC MGP_129S1SvImJ_T0044006.1 MGP_129S1SvImJ_G0022715.1 mouse_genomes_project 16 28514725 28518044 + MGP_129S1SvImJ_P0044006 Fam43a protein_coding protein_coding MGP_129S1SvImJ_T0010121.1 MGP_129S1SvImJ_G0008237.1 mouse_genomes_project 16 371788 371876 + Gm23493 miRNA miRNA MGP_129S1SvImJ_T0013140.1 MGP_129S1SvImJ_G0011229.1 mouse_genomes_project 16 5329391 5332783 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013192.1 MGP_129S1SvImJ_G0011281.1 mouse_genomes_project 16 41877657 41878813 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0044733.1 MGP_129S1SvImJ_G0022898.1 mouse_genomes_project 16 56453390 56760370 - MGP_129S1SvImJ_P0044733 Cmss1 protein_coding protein_coding MGP_129S1SvImJ_T0006895.1 MGP_129S1SvImJ_G0005684.1 mouse_genomes_project 16 97167440 97231161 - 1600002D24Rik lincRNA lincRNA MGP_129S1SvImJ_T0006896.1 MGP_129S1SvImJ_G0005684.1 mouse_genomes_project 16 97178203 97263054 - 1600002D24Rik lincRNA lincRNA MGP_129S1SvImJ_T0044999.1 MGP_129S1SvImJ_G0023004.1 mouse_genomes_project 16 89777632 89778233 - MGP_129S1SvImJ_P0044999 Krtap16-3 protein_coding protein_coding MGP_129S1SvImJ_T0044011.1 MGP_129S1SvImJ_G0022717.1 mouse_genomes_project 16 29035216 29150562 - MGP_129S1SvImJ_P0044011 Acap2 protein_coding protein_coding MGP_129S1SvImJ_T0044012.1 MGP_129S1SvImJ_G0022717.1 mouse_genomes_project 16 29039298 29150315 - MGP_129S1SvImJ_P0044012 Acap2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042913.1 MGP_129S1SvImJ_G0022456.1 mouse_genomes_project 16 351401 368446 + MGP_129S1SvImJ_P0042913 Cluap1 protein_coding protein_coding MGP_129S1SvImJ_T0042914.1 MGP_129S1SvImJ_G0022456.1 mouse_genomes_project 16 351425 390499 + MGP_129S1SvImJ_P0042914 Cluap1 protein_coding protein_coding MGP_129S1SvImJ_T0042915.1 MGP_129S1SvImJ_G0022456.1 mouse_genomes_project 16 351639 356173 + Cluap1 protein_coding retained_intron MGP_129S1SvImJ_T0042916.1 MGP_129S1SvImJ_G0022456.1 mouse_genomes_project 16 351676 377847 + MGP_129S1SvImJ_P0042916 Cluap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042917.1 MGP_129S1SvImJ_G0022456.1 mouse_genomes_project 16 351706 368502 + MGP_129S1SvImJ_P0042917 Cluap1 protein_coding protein_coding MGP_129S1SvImJ_T0006855.1 MGP_129S1SvImJ_G0005656.1 mouse_genomes_project 16 28080323 28087484 - Gm26562 lincRNA lincRNA MGP_129S1SvImJ_T0043006.1 MGP_129S1SvImJ_G0022473.1 mouse_genomes_project 16 1347695 1364475 + MGP_129S1SvImJ_P0043006 4930562C15Rik protein_coding non_stop_decay MGP_129S1SvImJ_T0043007.1 MGP_129S1SvImJ_G0022473.1 mouse_genomes_project 16 1347695 1378904 + MGP_129S1SvImJ_P0043007 4930562C15Rik protein_coding protein_coding MGP_129S1SvImJ_T0043008.1 MGP_129S1SvImJ_G0022473.1 mouse_genomes_project 16 1353380 1364481 + MGP_129S1SvImJ_P0043008 4930562C15Rik protein_coding non_stop_decay MGP_129S1SvImJ_T0043009.1 MGP_129S1SvImJ_G0022473.1 mouse_genomes_project 16 1363086 1372225 + MGP_129S1SvImJ_P0043009 4930562C15Rik protein_coding protein_coding MGP_129S1SvImJ_T0043010.1 MGP_129S1SvImJ_G0022473.1 mouse_genomes_project 16 1372735 1378562 + MGP_129S1SvImJ_P0043010 4930562C15Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043011.1 MGP_129S1SvImJ_G0022473.1 mouse_genomes_project 16 1375535 1376391 + 4930562C15Rik protein_coding retained_intron MGP_129S1SvImJ_T0006873.1 MGP_129S1SvImJ_G0005669.1 mouse_genomes_project 16 56036335 56041315 + lincRNA lincRNA MGP_129S1SvImJ_T0043184.1 MGP_129S1SvImJ_G0022523.1 mouse_genomes_project 16 8084612 8120634 - MGP_129S1SvImJ_P0043184 Gspt1 protein_coding protein_coding MGP_129S1SvImJ_T0043185.1 MGP_129S1SvImJ_G0022523.1 mouse_genomes_project 16 8085372 8120573 - MGP_129S1SvImJ_P0043185 Gspt1 protein_coding protein_coding MGP_129S1SvImJ_T0043186.1 MGP_129S1SvImJ_G0022523.1 mouse_genomes_project 16 8085721 8089819 - MGP_129S1SvImJ_P0043186 Gspt1 protein_coding protein_coding MGP_129S1SvImJ_T0043187.1 MGP_129S1SvImJ_G0022523.1 mouse_genomes_project 16 8087905 8093834 - Gspt1 protein_coding retained_intron MGP_129S1SvImJ_T0043188.1 MGP_129S1SvImJ_G0022523.1 mouse_genomes_project 16 8096230 8104121 - Gspt1 protein_coding retained_intron MGP_129S1SvImJ_T0003717.1 MGP_129S1SvImJ_G0003359.1 mouse_genomes_project 16 93391017 93394770 - 1700048M11Rik antisense antisense MGP_129S1SvImJ_T0044013.1 MGP_129S1SvImJ_G0022718.1 mouse_genomes_project 16 29195165 29227313 - MGP_129S1SvImJ_P0044013 Ppp1r2 protein_coding protein_coding MGP_129S1SvImJ_T0044014.1 MGP_129S1SvImJ_G0022718.1 mouse_genomes_project 16 29201976 29224234 - MGP_129S1SvImJ_P0044014 Ppp1r2 protein_coding protein_coding MGP_129S1SvImJ_T0010147.1 MGP_129S1SvImJ_G0008263.1 mouse_genomes_project 16 22472764 22472850 + Mir28a miRNA miRNA MGP_129S1SvImJ_T0043197.1 MGP_129S1SvImJ_G0022526.1 mouse_genomes_project 16 8710482 8814407 - MGP_129S1SvImJ_P0043197 Cpped1 protein_coding protein_coding MGP_129S1SvImJ_T0043198.1 MGP_129S1SvImJ_G0022526.1 mouse_genomes_project 16 8710488 8814406 - MGP_129S1SvImJ_P0043198 Cpped1 protein_coding protein_coding MGP_129S1SvImJ_T0043199.1 MGP_129S1SvImJ_G0022526.1 mouse_genomes_project 16 8734808 8814380 - Cpped1 protein_coding retained_intron MGP_129S1SvImJ_T0043200.1 MGP_129S1SvImJ_G0022526.1 mouse_genomes_project 16 8735797 8814382 - MGP_129S1SvImJ_P0043200 Cpped1 protein_coding protein_coding MGP_129S1SvImJ_T0043201.1 MGP_129S1SvImJ_G0022526.1 mouse_genomes_project 16 8784969 8814429 - MGP_129S1SvImJ_P0043201 Cpped1 protein_coding protein_coding MGP_129S1SvImJ_T0099525.1 MGP_129S1SvImJ_G0037592.1 mouse_genomes_project 16 49851480 49851587 - Gm24925 snRNA snRNA MGP_129S1SvImJ_T0006858.1 MGP_129S1SvImJ_G0005659.1 mouse_genomes_project 16 34146378 34149375 - Gm26838 lincRNA lincRNA MGP_129S1SvImJ_T0102268.1 MGP_129S1SvImJ_G0040102.1 mouse_genomes_project 16 64281 65221 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0006862.1 MGP_129S1SvImJ_G0005663.1 mouse_genomes_project 16 43079551 43082602 + Gm26732 lincRNA lincRNA MGP_129S1SvImJ_T0006875.1 MGP_129S1SvImJ_G0005671.1 mouse_genomes_project 16 56430851 56431458 + Gm26800 lincRNA lincRNA MGP_129S1SvImJ_T0043675.1 MGP_129S1SvImJ_G0022634.1 mouse_genomes_project 16 17153587 17163676 - MGP_129S1SvImJ_P0043675 A930003A15Rik protein_coding protein_coding MGP_129S1SvImJ_T0006851.1 MGP_129S1SvImJ_G0005652.1 mouse_genomes_project 16 27659536 27689955 + Gm26834 lincRNA lincRNA MGP_129S1SvImJ_T0000018.1 MGP_129S1SvImJ_G0000013.1 mouse_genomes_project 16 16475490 16475804 - MGP_129S1SvImJ_P0000018 Iglc4 IG_C_gene IG_C_gene MGP_129S1SvImJ_T0099503.1 MGP_129S1SvImJ_G0037570.1 mouse_genomes_project 16 20595432 20595538 + Gm23715 snRNA snRNA MGP_129S1SvImJ_T0100799.1 MGP_129S1SvImJ_G0038866.1 mouse_genomes_project 16 60407977 60408054 + Gm23852 snoRNA snoRNA MGP_129S1SvImJ_T0013155.1 MGP_129S1SvImJ_G0011244.1 mouse_genomes_project 16 13474718 13475692 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0044021.1 MGP_129S1SvImJ_G0022720.1 mouse_genomes_project 16 29390829 29436387 + MGP_129S1SvImJ_P0044021 Bdh1 protein_coding protein_coding MGP_129S1SvImJ_T0044022.1 MGP_129S1SvImJ_G0022720.1 mouse_genomes_project 16 29402575 29440436 + MGP_129S1SvImJ_P0044022 Bdh1 protein_coding protein_coding MGP_129S1SvImJ_T0044023.1 MGP_129S1SvImJ_G0022720.1 mouse_genomes_project 16 29402579 29414122 + Bdh1 protein_coding retained_intron MGP_129S1SvImJ_T0044024.1 MGP_129S1SvImJ_G0022720.1 mouse_genomes_project 16 29403126 29436338 + MGP_129S1SvImJ_P0044024 Bdh1 protein_coding protein_coding MGP_129S1SvImJ_T0044025.1 MGP_129S1SvImJ_G0022720.1 mouse_genomes_project 16 29412188 29435866 + MGP_129S1SvImJ_P0044025 Bdh1 protein_coding protein_coding MGP_129S1SvImJ_T0044026.1 MGP_129S1SvImJ_G0022720.1 mouse_genomes_project 16 29439650 29440436 + Bdh1 protein_coding processed_transcript MGP_129S1SvImJ_T0099528.1 MGP_129S1SvImJ_G0037595.1 mouse_genomes_project 16 54853675 54853775 - Gm26369 snRNA snRNA MGP_129S1SvImJ_T0044981.1 MGP_129S1SvImJ_G0022988.1 mouse_genomes_project 16 89483902 89484548 - MGP_129S1SvImJ_P0044981 Krtap27-1 protein_coding protein_coding MGP_129S1SvImJ_T0043663.1 MGP_129S1SvImJ_G0022628.1 mouse_genomes_project 16 16808497 16815347 - MGP_129S1SvImJ_P0043663 protein_coding protein_coding MGP_129S1SvImJ_T0043124.1 MGP_129S1SvImJ_G0022508.1 mouse_genomes_project 16 7284430 7334459 + MGP_129S1SvImJ_P0043124 Ciita protein_coding unknown_likely_coding MGP_129S1SvImJ_T0043125.1 MGP_129S1SvImJ_G0022508.1 mouse_genomes_project 16 7291551 7335725 + MGP_129S1SvImJ_P0043125 Ciita protein_coding protein_coding MGP_129S1SvImJ_T0010148.1 MGP_129S1SvImJ_G0008264.1 mouse_genomes_project 16 26407978 26408087 - Mir690 miRNA miRNA MGP_129S1SvImJ_T0045110.1 MGP_129S1SvImJ_G0023044.1 mouse_genomes_project 16 92642298 92647041 - MGP_129S1SvImJ_P0045110 Dnajc28 protein_coding protein_coding MGP_129S1SvImJ_T0045111.1 MGP_129S1SvImJ_G0023044.1 mouse_genomes_project 16 92643767 92647036 - MGP_129S1SvImJ_P0045111 Dnajc28 protein_coding protein_coding MGP_129S1SvImJ_T0045112.1 MGP_129S1SvImJ_G0023044.1 mouse_genomes_project 16 92644878 92647033 - MGP_129S1SvImJ_P0045112 Dnajc28 protein_coding protein_coding MGP_129S1SvImJ_T0045113.1 MGP_129S1SvImJ_G0023044.1 mouse_genomes_project 16 92645143 92647068 - MGP_129S1SvImJ_P0045113 Dnajc28 protein_coding protein_coding MGP_129S1SvImJ_T0045005.1 MGP_129S1SvImJ_G0023010.1 mouse_genomes_project 16 89902378 89904340 - MGP_129S1SvImJ_P0045005 1110025L11Rik protein_coding protein_coding MGP_129S1SvImJ_T0099527.1 MGP_129S1SvImJ_G0037594.1 mouse_genomes_project 16 54660178 54660285 - Gm23003 snRNA snRNA MGP_129S1SvImJ_T0044368.1 MGP_129S1SvImJ_G0022803.1 mouse_genomes_project 16 36119047 36126331 - MGP_129S1SvImJ_P0044368 Ndufb4 protein_coding protein_coding MGP_129S1SvImJ_T0044369.1 MGP_129S1SvImJ_G0022803.1 mouse_genomes_project 16 36119478 36121237 - Ndufb4 protein_coding retained_intron MGP_129S1SvImJ_T0100784.1 MGP_129S1SvImJ_G0038851.1 mouse_genomes_project 16 34055775 34055923 - Gm25967 snoRNA snoRNA MGP_129S1SvImJ_T0044400.1 MGP_129S1SvImJ_G0022815.1 mouse_genomes_project 16 36973890 36981170 - MGP_129S1SvImJ_P0044400 Adprh protein_coding protein_coding MGP_129S1SvImJ_T0003689.1 MGP_129S1SvImJ_G0003338.1 mouse_genomes_project 16 30923128 30926852 + Gm26769 antisense antisense MGP_129S1SvImJ_T0043853.1 MGP_129S1SvImJ_G0022671.1 mouse_genomes_project 16 20325204 20331442 - MGP_129S1SvImJ_P0043853 Crygs protein_coding protein_coding MGP_129S1SvImJ_T0043106.1 MGP_129S1SvImJ_G0022503.1 mouse_genomes_project 16 6965945 7020462 + MGP_129S1SvImJ_P0043106 Atf7ip2 protein_coding protein_coding MGP_129S1SvImJ_T0043107.1 MGP_129S1SvImJ_G0022503.1 mouse_genomes_project 16 6966139 7014595 + MGP_129S1SvImJ_P0043107 Atf7ip2 protein_coding protein_coding MGP_129S1SvImJ_T0043108.1 MGP_129S1SvImJ_G0022503.1 mouse_genomes_project 16 6966155 7018225 + MGP_129S1SvImJ_P0043108 Atf7ip2 protein_coding protein_coding MGP_129S1SvImJ_T0043109.1 MGP_129S1SvImJ_G0022503.1 mouse_genomes_project 16 6966180 6995794 + Atf7ip2 protein_coding retained_intron MGP_129S1SvImJ_T0013196.1 MGP_129S1SvImJ_G0011285.1 mouse_genomes_project 16 43581711 43582003 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003702.1 MGP_129S1SvImJ_G0003348.1 mouse_genomes_project 16 37377168 37377505 + antisense antisense MGP_129S1SvImJ_T0044992.1 MGP_129S1SvImJ_G0022997.1 mouse_genomes_project 16 89686658 89687235 - MGP_129S1SvImJ_P0044992 Krtap19-1 protein_coding protein_coding MGP_129S1SvImJ_T0044589.1 MGP_129S1SvImJ_G0022857.1 mouse_genomes_project 16 44502603 44515916 - MGP_129S1SvImJ_P0044589 Tagln3 protein_coding protein_coding MGP_129S1SvImJ_T0045229.1 MGP_129S1SvImJ_G0023066.1 mouse_genomes_project 16 95134378 95145117 - MGP_129S1SvImJ_P0045229 Cldn14 protein_coding protein_coding MGP_129S1SvImJ_T0045230.1 MGP_129S1SvImJ_G0023066.1 mouse_genomes_project 16 95134378 95144867 - MGP_129S1SvImJ_P0045230 Cldn14 protein_coding protein_coding MGP_129S1SvImJ_T0045231.1 MGP_129S1SvImJ_G0023066.1 mouse_genomes_project 16 95134379 95222573 - MGP_129S1SvImJ_P0045231 Cldn14 protein_coding protein_coding MGP_129S1SvImJ_T0045232.1 MGP_129S1SvImJ_G0023066.1 mouse_genomes_project 16 95135096 95144867 - Cldn14 protein_coding processed_transcript MGP_129S1SvImJ_T0045233.1 MGP_129S1SvImJ_G0023066.1 mouse_genomes_project 16 95135154 95145117 - Cldn14 protein_coding processed_transcript MGP_129S1SvImJ_T0010166.1 MGP_129S1SvImJ_G0008282.1 mouse_genomes_project 16 57931566 57931662 - Gm27564 miRNA miRNA MGP_129S1SvImJ_T0045287.1 MGP_129S1SvImJ_G0023075.1 mouse_genomes_project 16 96550303 96594170 + MGP_129S1SvImJ_P0045287 Kcnj15 protein_coding protein_coding MGP_129S1SvImJ_T0045288.1 MGP_129S1SvImJ_G0023075.1 mouse_genomes_project 16 96550303 96593582 + MGP_129S1SvImJ_P0045288 Kcnj15 protein_coding protein_coding MGP_129S1SvImJ_T0045289.1 MGP_129S1SvImJ_G0023075.1 mouse_genomes_project 16 96550303 96594170 + MGP_129S1SvImJ_P0045289 Kcnj15 protein_coding protein_coding MGP_129S1SvImJ_T0045290.1 MGP_129S1SvImJ_G0023075.1 mouse_genomes_project 16 96550303 96594170 + MGP_129S1SvImJ_P0045290 Kcnj15 protein_coding protein_coding MGP_129S1SvImJ_T0045291.1 MGP_129S1SvImJ_G0023075.1 mouse_genomes_project 16 96550303 96592440 + MGP_129S1SvImJ_P0045291 Kcnj15 protein_coding protein_coding MGP_129S1SvImJ_T0045292.1 MGP_129S1SvImJ_G0023075.1 mouse_genomes_project 16 96550396 96594219 + MGP_129S1SvImJ_P0045292 Kcnj15 protein_coding protein_coding MGP_129S1SvImJ_T0045293.1 MGP_129S1SvImJ_G0023075.1 mouse_genomes_project 16 96550404 96589988 + MGP_129S1SvImJ_P0045293 Kcnj15 protein_coding protein_coding MGP_129S1SvImJ_T0045294.1 MGP_129S1SvImJ_G0023075.1 mouse_genomes_project 16 96550404 96589653 + MGP_129S1SvImJ_P0045294 Kcnj15 protein_coding protein_coding MGP_129S1SvImJ_T0045295.1 MGP_129S1SvImJ_G0023075.1 mouse_genomes_project 16 96550428 96589630 + MGP_129S1SvImJ_P0045295 Kcnj15 protein_coding protein_coding MGP_129S1SvImJ_T0045296.1 MGP_129S1SvImJ_G0023075.1 mouse_genomes_project 16 96550539 96594170 + MGP_129S1SvImJ_P0045296 Kcnj15 protein_coding protein_coding MGP_129S1SvImJ_T0045297.1 MGP_129S1SvImJ_G0023075.1 mouse_genomes_project 16 96550675 96585787 + Kcnj15 protein_coding processed_transcript MGP_129S1SvImJ_T0045298.1 MGP_129S1SvImJ_G0023075.1 mouse_genomes_project 16 96550736 96594170 + MGP_129S1SvImJ_P0045298 Kcnj15 protein_coding protein_coding MGP_129S1SvImJ_T0045299.1 MGP_129S1SvImJ_G0023075.1 mouse_genomes_project 16 96571639 96585850 + MGP_129S1SvImJ_P0045299 Kcnj15 protein_coding protein_coding MGP_129S1SvImJ_T0045357.1 MGP_129S1SvImJ_G0023085.1 mouse_genomes_project 16 97742916 97802483 + MGP_129S1SvImJ_P0045357 Igsf5 protein_coding protein_coding MGP_129S1SvImJ_T0045358.1 MGP_129S1SvImJ_G0023085.1 mouse_genomes_project 16 97743042 97786799 + MGP_129S1SvImJ_P0045358 Igsf5 protein_coding protein_coding MGP_129S1SvImJ_T0045359.1 MGP_129S1SvImJ_G0023085.1 mouse_genomes_project 16 97743042 97786802 + MGP_129S1SvImJ_P0045359 Igsf5 protein_coding protein_coding MGP_129S1SvImJ_T0045360.1 MGP_129S1SvImJ_G0023085.1 mouse_genomes_project 16 97743042 97912406 + MGP_129S1SvImJ_P0045360 Igsf5 protein_coding protein_coding MGP_129S1SvImJ_T0045361.1 MGP_129S1SvImJ_G0023085.1 mouse_genomes_project 16 97769896 97786099 + Igsf5 protein_coding processed_transcript MGP_129S1SvImJ_T0045362.1 MGP_129S1SvImJ_G0023085.1 mouse_genomes_project 16 97779362 97802316 + MGP_129S1SvImJ_P0045362 Igsf5 protein_coding protein_coding MGP_129S1SvImJ_T0043785.1 MGP_129S1SvImJ_G0022652.1 mouse_genomes_project 16 18043219 18049221 + MGP_129S1SvImJ_P0043785 Fam131a protein_coding protein_coding MGP_129S1SvImJ_T0043786.1 MGP_129S1SvImJ_G0022652.1 mouse_genomes_project 16 18044845 18052986 + MGP_129S1SvImJ_P0043786 Fam131a protein_coding protein_coding MGP_129S1SvImJ_T0043787.1 MGP_129S1SvImJ_G0022652.1 mouse_genomes_project 16 18045054 18051822 + MGP_129S1SvImJ_P0043787 Fam131a protein_coding protein_coding MGP_129S1SvImJ_T0043788.1 MGP_129S1SvImJ_G0022652.1 mouse_genomes_project 16 18046112 18051597 + MGP_129S1SvImJ_P0043788 Fam131a protein_coding protein_coding MGP_129S1SvImJ_T0043434.1 MGP_129S1SvImJ_G0022579.1 mouse_genomes_project 16 14556314 14584166 + MGP_129S1SvImJ_P0043434 Snap29 protein_coding protein_coding MGP_129S1SvImJ_T0101638.1 MGP_129S1SvImJ_G0039672.1 mouse_genomes_project 16 695447 699159 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0043293.1 MGP_129S1SvImJ_G0022551.1 mouse_genomes_project 16 12700251 12714303 - MGP_129S1SvImJ_P0043293 Mcm4 protein_coding protein_coding MGP_129S1SvImJ_T0044379.1 MGP_129S1SvImJ_G0022808.1 mouse_genomes_project 16 36600727 36762245 + MGP_129S1SvImJ_P0044379 Gsk3b protein_coding protein_coding MGP_129S1SvImJ_T0044380.1 MGP_129S1SvImJ_G0022808.1 mouse_genomes_project 16 36602014 36756937 + MGP_129S1SvImJ_P0044380 Gsk3b protein_coding protein_coding MGP_129S1SvImJ_T0044381.1 MGP_129S1SvImJ_G0022808.1 mouse_genomes_project 16 36655065 36706837 + Gsk3b protein_coding processed_transcript MGP_129S1SvImJ_T0044382.1 MGP_129S1SvImJ_G0022808.1 mouse_genomes_project 16 36656021 36724747 + Gsk3b protein_coding retained_intron MGP_129S1SvImJ_T0045058.1 MGP_129S1SvImJ_G0023031.1 mouse_genomes_project 16 91899045 91908027 - MGP_129S1SvImJ_P0045058 1110004E09Rik protein_coding protein_coding MGP_129S1SvImJ_T0045059.1 MGP_129S1SvImJ_G0023031.1 mouse_genomes_project 16 91899189 91903228 - MGP_129S1SvImJ_P0045059 1110004E09Rik protein_coding protein_coding MGP_129S1SvImJ_T0045060.1 MGP_129S1SvImJ_G0023031.1 mouse_genomes_project 16 91899206 91908127 - MGP_129S1SvImJ_P0045060 1110004E09Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045061.1 MGP_129S1SvImJ_G0023031.1 mouse_genomes_project 16 91900355 91907923 - MGP_129S1SvImJ_P0045061 1110004E09Rik protein_coding protein_coding MGP_129S1SvImJ_T0045062.1 MGP_129S1SvImJ_G0023031.1 mouse_genomes_project 16 91900418 91907706 - MGP_129S1SvImJ_P0045062 1110004E09Rik protein_coding protein_coding MGP_129S1SvImJ_T0045063.1 MGP_129S1SvImJ_G0023031.1 mouse_genomes_project 16 91900616 91908026 - 1110004E09Rik protein_coding processed_transcript MGP_129S1SvImJ_T0043043.1 MGP_129S1SvImJ_G0022485.1 mouse_genomes_project 16 1680991 1721946 + MGP_129S1SvImJ_P0043043 Sec14l5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0017517.1 MGP_129S1SvImJ_G0015312.1 mouse_genomes_project 16 15265040 15266189 + Gm15954 processed_transcript processed_transcript MGP_129S1SvImJ_T0043539.1 MGP_129S1SvImJ_G0022601.1 mouse_genomes_project 16 15255127 15288706 - MGP_129S1SvImJ_P0043539 Prodh protein_coding protein_coding MGP_129S1SvImJ_T0043545.1 MGP_129S1SvImJ_G0022601.1 mouse_genomes_project 16 15267548 15288700 - MGP_129S1SvImJ_P0043545 Prodh protein_coding protein_coding MGP_129S1SvImJ_T0043546.1 MGP_129S1SvImJ_G0022601.1 mouse_genomes_project 16 15267952 15278811 - MGP_129S1SvImJ_P0043546 Prodh protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043547.1 MGP_129S1SvImJ_G0022601.1 mouse_genomes_project 16 15268082 15279485 - MGP_129S1SvImJ_P0043547 Prodh protein_coding protein_coding MGP_129S1SvImJ_T0043548.1 MGP_129S1SvImJ_G0022601.1 mouse_genomes_project 16 15280554 15281862 - Prodh protein_coding processed_transcript MGP_129S1SvImJ_T0043549.1 MGP_129S1SvImJ_G0022601.1 mouse_genomes_project 16 15283746 15288565 - MGP_129S1SvImJ_P0043549 Prodh protein_coding protein_coding MGP_129S1SvImJ_T0013211.1 MGP_129S1SvImJ_G0011300.1 mouse_genomes_project 16 60804318 60804829 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011432.1 MGP_129S1SvImJ_G0009548.1 mouse_genomes_project 16 46465849 46466163 - Gm25318 misc_RNA misc_RNA MGP_129S1SvImJ_T0044996.1 MGP_129S1SvImJ_G0023001.1 mouse_genomes_project 16 89717080 89717563 - MGP_129S1SvImJ_P0044996 Krtap19-5 protein_coding protein_coding MGP_129S1SvImJ_T0010174.1 MGP_129S1SvImJ_G0008290.1 mouse_genomes_project 16 77730076 77730170 + Mirlet7c-1 miRNA miRNA MGP_129S1SvImJ_T0043054.1 MGP_129S1SvImJ_G0022489.1 mouse_genomes_project 16 1773951 1785537 - MGP_129S1SvImJ_P0043054 Eef2kmt protein_coding protein_coding MGP_129S1SvImJ_T0043055.1 MGP_129S1SvImJ_G0022489.1 mouse_genomes_project 16 1774678 1785495 - Eef2kmt protein_coding retained_intron MGP_129S1SvImJ_T0043056.1 MGP_129S1SvImJ_G0022489.1 mouse_genomes_project 16 1776926 1785510 - MGP_129S1SvImJ_P0043056 Eef2kmt protein_coding protein_coding MGP_129S1SvImJ_T0043057.1 MGP_129S1SvImJ_G0022489.1 mouse_genomes_project 16 1776938 1778422 - Eef2kmt protein_coding retained_intron MGP_129S1SvImJ_T0043058.1 MGP_129S1SvImJ_G0022489.1 mouse_genomes_project 16 1778626 1785483 - Eef2kmt protein_coding retained_intron MGP_129S1SvImJ_T0045221.1 MGP_129S1SvImJ_G0023065.1 mouse_genomes_project 16 95095065 95118691 + MGP_129S1SvImJ_P0045221 Chaf1b protein_coding protein_coding MGP_129S1SvImJ_T0045222.1 MGP_129S1SvImJ_G0023065.1 mouse_genomes_project 16 95095088 95118653 + MGP_129S1SvImJ_P0045222 Chaf1b protein_coding protein_coding MGP_129S1SvImJ_T0045223.1 MGP_129S1SvImJ_G0023065.1 mouse_genomes_project 16 95095095 95105449 + Chaf1b protein_coding retained_intron MGP_129S1SvImJ_T0045224.1 MGP_129S1SvImJ_G0023065.1 mouse_genomes_project 16 95095180 95096636 + MGP_129S1SvImJ_P0045224 Chaf1b protein_coding protein_coding MGP_129S1SvImJ_T0045225.1 MGP_129S1SvImJ_G0023065.1 mouse_genomes_project 16 95095366 95098317 + MGP_129S1SvImJ_P0045225 Chaf1b protein_coding protein_coding MGP_129S1SvImJ_T0045226.1 MGP_129S1SvImJ_G0023065.1 mouse_genomes_project 16 95097874 95103950 + Chaf1b protein_coding processed_transcript MGP_129S1SvImJ_T0045227.1 MGP_129S1SvImJ_G0023065.1 mouse_genomes_project 16 95103901 95112654 + Chaf1b protein_coding retained_intron MGP_129S1SvImJ_T0045228.1 MGP_129S1SvImJ_G0023065.1 mouse_genomes_project 16 95117217 95118686 + Chaf1b protein_coding retained_intron MGP_129S1SvImJ_T0045332.1 MGP_129S1SvImJ_G0023080.1 mouse_genomes_project 16 97479717 97486868 - MGP_129S1SvImJ_P0045332 Hmgn1 protein_coding protein_coding MGP_129S1SvImJ_T0045333.1 MGP_129S1SvImJ_G0023080.1 mouse_genomes_project 16 97481371 97484478 - Hmgn1 protein_coding retained_intron MGP_129S1SvImJ_T0045334.1 MGP_129S1SvImJ_G0023080.1 mouse_genomes_project 16 97481513 97486743 - MGP_129S1SvImJ_P0045334 Hmgn1 protein_coding protein_coding MGP_129S1SvImJ_T0045335.1 MGP_129S1SvImJ_G0023080.1 mouse_genomes_project 16 97485743 97486605 - Hmgn1 protein_coding retained_intron MGP_129S1SvImJ_T0044202.1 MGP_129S1SvImJ_G0022760.1 mouse_genomes_project 16 32198687 32210944 - MGP_129S1SvImJ_P0044202 Umps protein_coding protein_coding MGP_129S1SvImJ_T0044203.1 MGP_129S1SvImJ_G0022760.1 mouse_genomes_project 16 32198699 32210909 - MGP_129S1SvImJ_P0044203 Umps protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044759.1 MGP_129S1SvImJ_G0022903.1 mouse_genomes_project 16 57790202 57793495 - MGP_129S1SvImJ_P0044759 Gm813 protein_coding protein_coding MGP_129S1SvImJ_T0045237.1 MGP_129S1SvImJ_G0023070.1 mouse_genomes_project 16 95595852 95607353 - MGP_129S1SvImJ_P0045237 Pigp protein_coding protein_coding MGP_129S1SvImJ_T0045238.1 MGP_129S1SvImJ_G0023070.1 mouse_genomes_project 16 95601529 95607757 - MGP_129S1SvImJ_P0045238 Pigp protein_coding protein_coding MGP_129S1SvImJ_T0045239.1 MGP_129S1SvImJ_G0023070.1 mouse_genomes_project 16 95601529 95608078 - MGP_129S1SvImJ_P0045239 Pigp protein_coding protein_coding MGP_129S1SvImJ_T0045240.1 MGP_129S1SvImJ_G0023070.1 mouse_genomes_project 16 95601529 95607775 - MGP_129S1SvImJ_P0045240 Pigp protein_coding protein_coding MGP_129S1SvImJ_T0045241.1 MGP_129S1SvImJ_G0023070.1 mouse_genomes_project 16 95601529 95608078 - MGP_129S1SvImJ_P0045241 Pigp protein_coding protein_coding MGP_129S1SvImJ_T0045242.1 MGP_129S1SvImJ_G0023070.1 mouse_genomes_project 16 95601534 95602584 - Pigp protein_coding processed_transcript MGP_129S1SvImJ_T0045243.1 MGP_129S1SvImJ_G0023070.1 mouse_genomes_project 16 95601774 95607573 - MGP_129S1SvImJ_P0045243 Pigp protein_coding protein_coding MGP_129S1SvImJ_T0013204.1 MGP_129S1SvImJ_G0011293.1 mouse_genomes_project 16 49591676 49593015 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099490.1 MGP_129S1SvImJ_G0037557.1 mouse_genomes_project 16 4987160 4987264 + Gm26159 snRNA snRNA MGP_129S1SvImJ_T0010131.1 MGP_129S1SvImJ_G0008247.1 mouse_genomes_project 16 11168684 11168750 - Gm27671 miRNA miRNA MGP_129S1SvImJ_T0098524.1 MGP_129S1SvImJ_G0036609.1 mouse_genomes_project 16 85400273 85400371 + Gm25908 rRNA rRNA MGP_129S1SvImJ_T0045036.1 MGP_129S1SvImJ_G0023025.1 mouse_genomes_project 16 91148306 91209695 - MGP_129S1SvImJ_P0045036 Scaf4 protein_coding protein_coding MGP_129S1SvImJ_T0045037.1 MGP_129S1SvImJ_G0023025.1 mouse_genomes_project 16 91148505 91209812 - MGP_129S1SvImJ_P0045037 Scaf4 protein_coding protein_coding MGP_129S1SvImJ_T0044837.1 MGP_129S1SvImJ_G0022940.1 mouse_genomes_project 16 64256804 64272930 - 4930453N24Rik protein_coding processed_transcript MGP_129S1SvImJ_T0044838.1 MGP_129S1SvImJ_G0022940.1 mouse_genomes_project 16 64268469 64277354 - MGP_129S1SvImJ_P0044838 4930453N24Rik protein_coding protein_coding MGP_129S1SvImJ_T0010176.1 MGP_129S1SvImJ_G0008292.1 mouse_genomes_project 16 78193015 78193130 + Gm25025 miRNA miRNA MGP_129S1SvImJ_T0042981.1 MGP_129S1SvImJ_G0022468.1 mouse_genomes_project 16 1142612 1153475 + MGP_129S1SvImJ_P0042981 Vasn protein_coding protein_coding MGP_129S1SvImJ_T0042982.1 MGP_129S1SvImJ_G0022468.1 mouse_genomes_project 16 1142639 1150232 + Vasn protein_coding processed_transcript MGP_129S1SvImJ_T0003706.1 MGP_129S1SvImJ_G0003352.1 mouse_genomes_project 16 44751859 44777506 + Gm15638 antisense antisense MGP_129S1SvImJ_T0003707.1 MGP_129S1SvImJ_G0003352.1 mouse_genomes_project 16 44751866 44763496 + Gm15638 antisense antisense MGP_129S1SvImJ_T0003708.1 MGP_129S1SvImJ_G0003352.1 mouse_genomes_project 16 44751871 44754909 + Gm15638 antisense antisense MGP_129S1SvImJ_T0044914.1 MGP_129S1SvImJ_G0022968.1 mouse_genomes_project 16 85347726 85408105 + MGP_129S1SvImJ_P0044914 Jam2 protein_coding protein_coding MGP_129S1SvImJ_T0044915.1 MGP_129S1SvImJ_G0022968.1 mouse_genomes_project 16 85347989 85393173 + MGP_129S1SvImJ_P0044915 Jam2 protein_coding protein_coding MGP_129S1SvImJ_T0044916.1 MGP_129S1SvImJ_G0022968.1 mouse_genomes_project 16 85391583 85405063 + Jam2 protein_coding processed_transcript MGP_129S1SvImJ_T0044434.1 MGP_129S1SvImJ_G0022825.1 mouse_genomes_project 16 38574296 39609571 + MGP_129S1SvImJ_P0044434 Lsamp protein_coding protein_coding MGP_129S1SvImJ_T0044435.1 MGP_129S1SvImJ_G0022825.1 mouse_genomes_project 16 38574306 40849584 + MGP_129S1SvImJ_P0044435 Lsamp protein_coding protein_coding MGP_129S1SvImJ_T0044436.1 MGP_129S1SvImJ_G0022825.1 mouse_genomes_project 16 38574321 40050727 + MGP_129S1SvImJ_P0044436 Lsamp protein_coding protein_coding MGP_129S1SvImJ_T0044437.1 MGP_129S1SvImJ_G0022825.1 mouse_genomes_project 16 38574321 39847729 + MGP_129S1SvImJ_P0044437 Lsamp protein_coding protein_coding MGP_129S1SvImJ_T0044438.1 MGP_129S1SvImJ_G0022825.1 mouse_genomes_project 16 38574530 39268797 + Lsamp protein_coding processed_transcript MGP_129S1SvImJ_T0044439.1 MGP_129S1SvImJ_G0022825.1 mouse_genomes_project 16 40181574 40819518 + MGP_129S1SvImJ_P0044439 Lsamp protein_coding protein_coding MGP_129S1SvImJ_T0044440.1 MGP_129S1SvImJ_G0022825.1 mouse_genomes_project 16 40181753 40855873 + MGP_129S1SvImJ_P0044440 Lsamp protein_coding protein_coding MGP_129S1SvImJ_T0044441.1 MGP_129S1SvImJ_G0022825.1 mouse_genomes_project 16 40182135 40187968 + MGP_129S1SvImJ_P0044441 Lsamp protein_coding protein_coding MGP_129S1SvImJ_T0044442.1 MGP_129S1SvImJ_G0022825.1 mouse_genomes_project 16 40817288 40847747 + MGP_129S1SvImJ_P0044442 Lsamp protein_coding protein_coding MGP_129S1SvImJ_T0044443.1 MGP_129S1SvImJ_G0022825.1 mouse_genomes_project 16 40817329 40847572 + MGP_129S1SvImJ_P0044443 Lsamp protein_coding protein_coding MGP_129S1SvImJ_T0100793.1 MGP_129S1SvImJ_G0038860.1 mouse_genomes_project 16 52423741 52423849 - Gm22459 snoRNA snoRNA MGP_129S1SvImJ_T0006842.1 MGP_129S1SvImJ_G0005645.1 mouse_genomes_project 16 16496747 16516022 - Gm43388 lincRNA lincRNA MGP_129S1SvImJ_T0010163.1 MGP_129S1SvImJ_G0008279.1 mouse_genomes_project 16 52910404 52910469 + Gm25041 miRNA miRNA MGP_129S1SvImJ_T0006859.1 MGP_129S1SvImJ_G0005660.1 mouse_genomes_project 16 36980463 36981974 + D930030I03Rik lincRNA lincRNA MGP_129S1SvImJ_T0011426.1 MGP_129S1SvImJ_G0009542.1 mouse_genomes_project 16 17772203 17772478 + Gm23332 misc_RNA misc_RNA MGP_129S1SvImJ_T0043517.1 MGP_129S1SvImJ_G0022593.1 mouse_genomes_project 16 15017836 15078547 - MGP_129S1SvImJ_P0043517 Gm20518 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042968.1 MGP_129S1SvImJ_G0022466.1 mouse_genomes_project 16 1116146 1116671 - Gm9803 protein_coding retained_intron MGP_129S1SvImJ_T0042969.1 MGP_129S1SvImJ_G0022466.1 mouse_genomes_project 16 1116146 1126229 - MGP_129S1SvImJ_P0042969 Gm9803 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042970.1 MGP_129S1SvImJ_G0022466.1 mouse_genomes_project 16 1116146 1126281 - MGP_129S1SvImJ_P0042970 Gm9803 protein_coding protein_coding MGP_129S1SvImJ_T0042971.1 MGP_129S1SvImJ_G0022466.1 mouse_genomes_project 16 1116284 1117837 - Gm9803 protein_coding retained_intron MGP_129S1SvImJ_T0006836.1 MGP_129S1SvImJ_G0005640.1 mouse_genomes_project 16 8067914 8091117 + 2610020C07Rik lincRNA lincRNA MGP_129S1SvImJ_T0013198.1 MGP_129S1SvImJ_G0011287.1 mouse_genomes_project 16 44225346 44228320 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098841.1 MGP_129S1SvImJ_G0036921.1 mouse_genomes_project 16 28910448 28914575 - Gm15742 sense_intronic sense_intronic MGP_129S1SvImJ_T0006841.1 MGP_129S1SvImJ_G0005644.1 mouse_genomes_project 16 14390333 14397699 - Gm26635 lincRNA lincRNA MGP_129S1SvImJ_T0044465.1 MGP_129S1SvImJ_G0022830.1 mouse_genomes_project 16 42577611 42605381 - MGP_129S1SvImJ_P0044465 Qtrtd1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0044466.1 MGP_129S1SvImJ_G0022830.1 mouse_genomes_project 16 42577614 42605401 - Qtrtd1 protein_coding retained_intron MGP_129S1SvImJ_T0044467.1 MGP_129S1SvImJ_G0022830.1 mouse_genomes_project 16 42577614 42605438 - MGP_129S1SvImJ_P0044467 Qtrtd1 protein_coding protein_coding MGP_129S1SvImJ_T0044468.1 MGP_129S1SvImJ_G0022830.1 mouse_genomes_project 16 42578991 42583308 - Qtrtd1 protein_coding retained_intron MGP_129S1SvImJ_T0044469.1 MGP_129S1SvImJ_G0022830.1 mouse_genomes_project 16 42579237 42641650 - Qtrtd1 protein_coding retained_intron MGP_129S1SvImJ_T0044470.1 MGP_129S1SvImJ_G0022830.1 mouse_genomes_project 16 42583259 42585148 - Qtrtd1 protein_coding retained_intron MGP_129S1SvImJ_T0044471.1 MGP_129S1SvImJ_G0022830.1 mouse_genomes_project 16 42584698 42605409 - Qtrtd1 protein_coding retained_intron MGP_129S1SvImJ_T0044472.1 MGP_129S1SvImJ_G0022830.1 mouse_genomes_project 16 42587425 42592717 - Qtrtd1 protein_coding retained_intron MGP_129S1SvImJ_T0044473.1 MGP_129S1SvImJ_G0022830.1 mouse_genomes_project 16 42592535 42605408 - MGP_129S1SvImJ_P0044473 Qtrtd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044474.1 MGP_129S1SvImJ_G0022830.1 mouse_genomes_project 16 42596051 42605409 - Qtrtd1 protein_coding retained_intron MGP_129S1SvImJ_T0044576.1 MGP_129S1SvImJ_G0022852.1 mouse_genomes_project 16 44206154 44252499 - Gm609 protein_coding processed_transcript MGP_129S1SvImJ_T0044577.1 MGP_129S1SvImJ_G0022852.1 mouse_genomes_project 16 44212286 44274652 - MGP_129S1SvImJ_P0044577 Gm609 protein_coding protein_coding MGP_129S1SvImJ_T0043271.1 MGP_129S1SvImJ_G0022543.1 mouse_genomes_project 16 11242828 11343436 - MGP_129S1SvImJ_P0043271 Myh11 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0043272.1 MGP_129S1SvImJ_G0022543.1 mouse_genomes_project 16 11242829 11343478 - MGP_129S1SvImJ_P0043272 Myh11 protein_coding protein_coding MGP_129S1SvImJ_T0044896.1 MGP_129S1SvImJ_G0022958.1 mouse_genomes_project 16 77717775 77732488 - MGP_129S1SvImJ_P0044896 Gm11146 protein_coding protein_coding MGP_129S1SvImJ_T0043666.1 MGP_129S1SvImJ_G0022631.1 mouse_genomes_project 16 16882875 16883948 - MGP_129S1SvImJ_P0043666 Olfr170 protein_coding protein_coding MGP_129S1SvImJ_T0043018.1 MGP_129S1SvImJ_G0022477.1 mouse_genomes_project 16 1460699 1484132 - MGP_129S1SvImJ_P0043018 Anks3 protein_coding protein_coding MGP_129S1SvImJ_T0043460.1 MGP_129S1SvImJ_G0022584.1 mouse_genomes_project 16 14701695 14719726 - MGP_129S1SvImJ_P0043460 Lrrc74b protein_coding protein_coding MGP_129S1SvImJ_T0043461.1 MGP_129S1SvImJ_G0022584.1 mouse_genomes_project 16 14701695 14719726 - MGP_129S1SvImJ_P0043461 Lrrc74b protein_coding protein_coding MGP_129S1SvImJ_T0043462.1 MGP_129S1SvImJ_G0022584.1 mouse_genomes_project 16 14702660 14712911 - Lrrc74b protein_coding processed_transcript MGP_129S1SvImJ_T0043463.1 MGP_129S1SvImJ_G0022584.1 mouse_genomes_project 16 14707289 14719723 - MGP_129S1SvImJ_P0043463 Lrrc74b protein_coding protein_coding MGP_129S1SvImJ_T0043741.1 MGP_129S1SvImJ_G0022647.1 mouse_genomes_project 16 17942873 17948191 - MGP_129S1SvImJ_P0043741 Alg3 protein_coding protein_coding MGP_129S1SvImJ_T0043742.1 MGP_129S1SvImJ_G0022647.1 mouse_genomes_project 16 17942894 17948154 - MGP_129S1SvImJ_P0043742 Alg3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043743.1 MGP_129S1SvImJ_G0022647.1 mouse_genomes_project 16 17942895 17948170 - MGP_129S1SvImJ_P0043743 Alg3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043744.1 MGP_129S1SvImJ_G0022647.1 mouse_genomes_project 16 17946164 17948175 - Alg3 protein_coding processed_transcript MGP_129S1SvImJ_T0043358.1 MGP_129S1SvImJ_G0022565.1 mouse_genomes_project 16 13990493 14025171 + MGP_129S1SvImJ_P0043358 Ppm1f protein_coding protein_coding MGP_129S1SvImJ_T0043359.1 MGP_129S1SvImJ_G0022565.1 mouse_genomes_project 16 13990598 14013007 + Ppm1f protein_coding processed_transcript MGP_129S1SvImJ_T0010154.1 MGP_129S1SvImJ_G0008270.1 mouse_genomes_project 16 35197002 35197072 + Gm22617 miRNA miRNA MGP_129S1SvImJ_T0043931.1 MGP_129S1SvImJ_G0022696.1 mouse_genomes_project 16 24324127 24469075 + MGP_129S1SvImJ_P0043931 Il1rap protein_coding protein_coding MGP_129S1SvImJ_T0043932.1 MGP_129S1SvImJ_G0022696.1 mouse_genomes_project 16 24324165 24468164 + MGP_129S1SvImJ_P0043932 Il1rap protein_coding protein_coding MGP_129S1SvImJ_T0043933.1 MGP_129S1SvImJ_G0022696.1 mouse_genomes_project 16 24324176 24446189 + MGP_129S1SvImJ_P0043933 Il1rap protein_coding protein_coding MGP_129S1SvImJ_T0043934.1 MGP_129S1SvImJ_G0022696.1 mouse_genomes_project 16 24324180 24461113 + MGP_129S1SvImJ_P0043934 Il1rap protein_coding protein_coding MGP_129S1SvImJ_T0043935.1 MGP_129S1SvImJ_G0022696.1 mouse_genomes_project 16 24372908 24458437 + MGP_129S1SvImJ_P0043935 Il1rap protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043936.1 MGP_129S1SvImJ_G0022696.1 mouse_genomes_project 16 24466244 24473928 + MGP_129S1SvImJ_P0043936 Il1rap protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043937.1 MGP_129S1SvImJ_G0022696.1 mouse_genomes_project 16 24470852 24472039 + Il1rap protein_coding processed_transcript MGP_129S1SvImJ_T0043143.1 MGP_129S1SvImJ_G0022514.1 mouse_genomes_project 16 7618742 7619468 - MGP_129S1SvImJ_P0043143 Prm2 protein_coding protein_coding MGP_129S1SvImJ_T0043144.1 MGP_129S1SvImJ_G0022514.1 mouse_genomes_project 16 7618899 7623497 - MGP_129S1SvImJ_P0043144 Prm2 protein_coding protein_coding MGP_129S1SvImJ_T0045114.1 MGP_129S1SvImJ_G0023045.1 mouse_genomes_project 16 92649227 92674730 - MGP_129S1SvImJ_P0045114 Gart protein_coding protein_coding MGP_129S1SvImJ_T0045115.1 MGP_129S1SvImJ_G0023045.1 mouse_genomes_project 16 92649434 92671161 - MGP_129S1SvImJ_P0045115 Gart protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045116.1 MGP_129S1SvImJ_G0023045.1 mouse_genomes_project 16 92661418 92674713 - MGP_129S1SvImJ_P0045116 Gart protein_coding protein_coding MGP_129S1SvImJ_T0013191.1 MGP_129S1SvImJ_G0011280.1 mouse_genomes_project 16 41641408 41644245 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099522.1 MGP_129S1SvImJ_G0037589.1 mouse_genomes_project 16 44829551 44829658 - Gm24754 snRNA snRNA MGP_129S1SvImJ_T0045000.1 MGP_129S1SvImJ_G0023005.1 mouse_genomes_project 16 89826850 89827230 - MGP_129S1SvImJ_P0045000 Krtap22-2 protein_coding protein_coding MGP_129S1SvImJ_T0044129.1 MGP_129S1SvImJ_G0022745.1 mouse_genomes_project 16 30891458 30913479 - MGP_129S1SvImJ_P0044129 Muc20 protein_coding protein_coding MGP_129S1SvImJ_T0044132.1 MGP_129S1SvImJ_G0022745.1 mouse_genomes_project 16 30900812 30913479 - MGP_129S1SvImJ_P0044132 Muc20 protein_coding protein_coding MGP_129S1SvImJ_T0045015.1 MGP_129S1SvImJ_G0023018.1 mouse_genomes_project 16 90254668 90256488 - MGP_129S1SvImJ_P0045015 Krtap21-1 protein_coding protein_coding MGP_129S1SvImJ_T0013215.1 MGP_129S1SvImJ_G0011304.1 mouse_genomes_project 16 75763338 75763768 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099039.1 MGP_129S1SvImJ_G0037108.1 mouse_genomes_project 16 93564214 93583300 + 2410124H12Rik sense_overlapping sense_overlapping MGP_129S1SvImJ_T0006863.1 MGP_129S1SvImJ_G0005664.1 mouse_genomes_project 16 48090103 48141321 - 1700026J12Rik lincRNA lincRNA MGP_129S1SvImJ_T0006864.1 MGP_129S1SvImJ_G0005664.1 mouse_genomes_project 16 48090130 48141321 - 1700026J12Rik lincRNA lincRNA MGP_129S1SvImJ_T0043309.1 MGP_129S1SvImJ_G0022557.1 mouse_genomes_project 16 13419016 13467437 - MGP_129S1SvImJ_P0043309 Dnm1l protein_coding protein_coding MGP_129S1SvImJ_T0043310.1 MGP_129S1SvImJ_G0022557.1 mouse_genomes_project 16 13419016 13467437 - MGP_129S1SvImJ_P0043310 Dnm1l protein_coding protein_coding MGP_129S1SvImJ_T0043311.1 MGP_129S1SvImJ_G0022557.1 mouse_genomes_project 16 13419016 13467437 - MGP_129S1SvImJ_P0043311 Dnm1l protein_coding protein_coding MGP_129S1SvImJ_T0044848.1 MGP_129S1SvImJ_G0022945.1 mouse_genomes_project 16 65066809 65091205 - MGP_129S1SvImJ_P0044848 Chmp2b protein_coding protein_coding MGP_129S1SvImJ_T0010156.1 MGP_129S1SvImJ_G0008272.1 mouse_genomes_project 16 39856109 39856169 + miRNA miRNA MGP_129S1SvImJ_T0102013.1 MGP_129S1SvImJ_G0039865.1 mouse_genomes_project 16 17758338 17769933 + unitary_pseudogene unitary_pseudogene MGP_129S1SvImJ_T0043757.1 MGP_129S1SvImJ_G0022650.1 mouse_genomes_project 16 17990723 18010794 + MGP_129S1SvImJ_P0043757 Psmd2 protein_coding protein_coding MGP_129S1SvImJ_T0043758.1 MGP_129S1SvImJ_G0022650.1 mouse_genomes_project 16 17990779 18010787 + MGP_129S1SvImJ_P0043758 Psmd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043759.1 MGP_129S1SvImJ_G0022650.1 mouse_genomes_project 16 17990791 17991830 + Psmd2 protein_coding processed_transcript MGP_129S1SvImJ_T0043760.1 MGP_129S1SvImJ_G0022650.1 mouse_genomes_project 16 18006374 18007084 + Psmd2 protein_coding processed_transcript MGP_129S1SvImJ_T0043761.1 MGP_129S1SvImJ_G0022650.1 mouse_genomes_project 16 18006719 18007736 + Psmd2 protein_coding processed_transcript MGP_129S1SvImJ_T0043762.1 MGP_129S1SvImJ_G0022650.1 mouse_genomes_project 16 18006786 18009477 + Psmd2 protein_coding processed_transcript MGP_129S1SvImJ_T0013159.1 MGP_129S1SvImJ_G0011248.1 mouse_genomes_project 16 14884872 14885310 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013197.1 MGP_129S1SvImJ_G0011286.1 mouse_genomes_project 16 43984311 43984713 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0044842.1 MGP_129S1SvImJ_G0022943.1 mouse_genomes_project 16 64431384 64625777 - MGP_129S1SvImJ_P0044842 Htr1f protein_coding protein_coding MGP_129S1SvImJ_T0003700.1 MGP_129S1SvImJ_G0003346.1 mouse_genomes_project 16 36824673 36827053 + Maats1os antisense antisense MGP_129S1SvImJ_T0045014.1 MGP_129S1SvImJ_G0023017.1 mouse_genomes_project 16 90046246 90046790 + MGP_129S1SvImJ_P0045014 Krtap20-2 protein_coding protein_coding MGP_129S1SvImJ_T0099505.1 MGP_129S1SvImJ_G0037572.1 mouse_genomes_project 16 22037859 22037922 - Gm24440 snRNA snRNA MGP_129S1SvImJ_T0100796.1 MGP_129S1SvImJ_G0038863.1 mouse_genomes_project 16 55139954 55140089 - Gm22422 snoRNA snoRNA MGP_129S1SvImJ_T0010127.1 MGP_129S1SvImJ_G0008243.1 mouse_genomes_project 16 10413747 10413826 + Mir193b miRNA miRNA MGP_129S1SvImJ_T0044788.1 MGP_129S1SvImJ_G0022917.1 mouse_genomes_project 16 58248990 58252962 - MGP_129S1SvImJ_P0044788 Olfr187 protein_coding protein_coding MGP_129S1SvImJ_T0044789.1 MGP_129S1SvImJ_G0022917.1 mouse_genomes_project 16 58248990 58249968 - MGP_129S1SvImJ_P0044789 Olfr187 protein_coding protein_coding MGP_129S1SvImJ_T0044790.1 MGP_129S1SvImJ_G0022917.1 mouse_genomes_project 16 58249515 58252980 - MGP_129S1SvImJ_P0044790 Olfr187 protein_coding protein_coding MGP_129S1SvImJ_T0013175.1 MGP_129S1SvImJ_G0011264.1 mouse_genomes_project 16 23434318 23435239 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099519.1 MGP_129S1SvImJ_G0037586.1 mouse_genomes_project 16 37474347 37474446 + Gm22500 snRNA snRNA MGP_129S1SvImJ_T0043529.1 MGP_129S1SvImJ_G0022598.1 mouse_genomes_project 16 15102347 15104300 - MGP_129S1SvImJ_P0043529 Gsc2 protein_coding protein_coding MGP_129S1SvImJ_T0003672.1 MGP_129S1SvImJ_G0003323.1 mouse_genomes_project 16 7485260 7500278 - Gm15558 antisense antisense MGP_129S1SvImJ_T0045107.1 MGP_129S1SvImJ_G0023043.1 mouse_genomes_project 16 92595627 92620675 - MGP_129S1SvImJ_P0045107 Tmem50b protein_coding protein_coding MGP_129S1SvImJ_T0045108.1 MGP_129S1SvImJ_G0023043.1 mouse_genomes_project 16 92596882 92620539 - MGP_129S1SvImJ_P0045108 Tmem50b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045109.1 MGP_129S1SvImJ_G0023043.1 mouse_genomes_project 16 92601287 92620675 - MGP_129S1SvImJ_P0045109 Tmem50b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0098516.1 MGP_129S1SvImJ_G0036601.1 mouse_genomes_project 16 10992001 10992111 - Gm26213 rRNA rRNA MGP_129S1SvImJ_T0003703.1 MGP_129S1SvImJ_G0003349.1 mouse_genomes_project 16 40054340 40073013 - Gm28750 antisense antisense MGP_129S1SvImJ_T0043325.1 MGP_129S1SvImJ_G0022560.1 mouse_genomes_project 16 13845400 13932013 - MGP_129S1SvImJ_P0043325 Spag6l protein_coding protein_coding MGP_129S1SvImJ_T0043326.1 MGP_129S1SvImJ_G0022560.1 mouse_genomes_project 16 13860479 13932020 - Spag6l protein_coding retained_intron MGP_129S1SvImJ_T0043327.1 MGP_129S1SvImJ_G0022560.1 mouse_genomes_project 16 13883425 13931981 - Spag6l protein_coding processed_transcript MGP_129S1SvImJ_T0043328.1 MGP_129S1SvImJ_G0022560.1 mouse_genomes_project 16 13883459 13932044 - Spag6l protein_coding processed_transcript MGP_129S1SvImJ_T0043329.1 MGP_129S1SvImJ_G0022560.1 mouse_genomes_project 16 13923812 13932156 - Spag6l protein_coding processed_transcript MGP_129S1SvImJ_T0043330.1 MGP_129S1SvImJ_G0022560.1 mouse_genomes_project 16 13924084 13932013 - Spag6l protein_coding processed_transcript MGP_129S1SvImJ_T0043331.1 MGP_129S1SvImJ_G0022560.1 mouse_genomes_project 16 13927502 13932007 - Spag6l protein_coding processed_transcript MGP_129S1SvImJ_T0010168.1 MGP_129S1SvImJ_G0008284.1 mouse_genomes_project 16 62207302 62207370 + Gm25986 miRNA miRNA MGP_129S1SvImJ_T0045367.1 MGP_129S1SvImJ_G0023087.1 mouse_genomes_project 16 97852208 97912619 + MGP_129S1SvImJ_P0045367 Pcp4 protein_coding protein_coding MGP_129S1SvImJ_T0044087.1 MGP_129S1SvImJ_G0022734.1 mouse_genomes_project 16 30324380 30329895 + MGP_129S1SvImJ_P0044087 Smco1 protein_coding protein_coding MGP_129S1SvImJ_T0010125.1 MGP_129S1SvImJ_G0008241.1 mouse_genomes_project 16 7736996 7737122 + Gm26268 miRNA miRNA MGP_129S1SvImJ_T0006889.1 MGP_129S1SvImJ_G0005680.1 mouse_genomes_project 16 92315828 92325724 - Gm15966 lincRNA lincRNA MGP_129S1SvImJ_T0006890.1 MGP_129S1SvImJ_G0005680.1 mouse_genomes_project 16 92316053 92322489 - Gm15966 lincRNA lincRNA MGP_129S1SvImJ_T0099506.1 MGP_129S1SvImJ_G0037573.1 mouse_genomes_project 16 23408026 23408133 - Gm24928 snRNA snRNA MGP_129S1SvImJ_T0003680.1 MGP_129S1SvImJ_G0003330.1 mouse_genomes_project 16 14277441 14278516 + Gm15648 antisense antisense MGP_129S1SvImJ_T0099511.1 MGP_129S1SvImJ_G0037578.1 mouse_genomes_project 16 34580755 34580859 - Gm25024 snRNA snRNA MGP_129S1SvImJ_T0013165.1 MGP_129S1SvImJ_G0011254.1 mouse_genomes_project 16 16934056 16934563 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099518.1 MGP_129S1SvImJ_G0037585.1 mouse_genomes_project 16 36485937 36486077 + Gm25140 snRNA snRNA MGP_129S1SvImJ_T0045284.1 MGP_129S1SvImJ_G0023074.1 mouse_genomes_project 16 96008389 96283870 - MGP_129S1SvImJ_P0045284 Kcnj6 protein_coding protein_coding MGP_129S1SvImJ_T0045285.1 MGP_129S1SvImJ_G0023074.1 mouse_genomes_project 16 96021174 96283870 - MGP_129S1SvImJ_P0045285 Kcnj6 protein_coding protein_coding MGP_129S1SvImJ_T0045286.1 MGP_129S1SvImJ_G0023074.1 mouse_genomes_project 16 96089146 96123339 - MGP_129S1SvImJ_P0045286 Kcnj6 protein_coding protein_coding MGP_129S1SvImJ_T0010158.1 MGP_129S1SvImJ_G0008274.1 mouse_genomes_project 16 42344835 42344918 + Mir568 miRNA miRNA MGP_129S1SvImJ_T0042996.1 MGP_129S1SvImJ_G0022471.1 mouse_genomes_project 16 1237912 1271792 + MGP_129S1SvImJ_P0042996 Hmox2 protein_coding protein_coding MGP_129S1SvImJ_T0042997.1 MGP_129S1SvImJ_G0022471.1 mouse_genomes_project 16 1237914 1273686 + MGP_129S1SvImJ_P0042997 Hmox2 protein_coding protein_coding MGP_129S1SvImJ_T0042998.1 MGP_129S1SvImJ_G0022471.1 mouse_genomes_project 16 1254929 1273193 + MGP_129S1SvImJ_P0042998 Hmox2 protein_coding protein_coding MGP_129S1SvImJ_T0042999.1 MGP_129S1SvImJ_G0022471.1 mouse_genomes_project 16 1263933 1273189 + MGP_129S1SvImJ_P0042999 Hmox2 protein_coding protein_coding MGP_129S1SvImJ_T0043000.1 MGP_129S1SvImJ_G0022471.1 mouse_genomes_project 16 1263961 1272034 + MGP_129S1SvImJ_P0043000 Hmox2 protein_coding protein_coding MGP_129S1SvImJ_T0013187.1 MGP_129S1SvImJ_G0011276.1 mouse_genomes_project 16 37230992 37231547 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101642.1 MGP_129S1SvImJ_G0039676.1 mouse_genomes_project 16 48315723 48316098 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101643.1 MGP_129S1SvImJ_G0039676.1 mouse_genomes_project 16 48315852 48316861 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0045195.1 MGP_129S1SvImJ_G0023059.1 mouse_genomes_project 16 93693659 93925879 - MGP_129S1SvImJ_P0045195 Runx1 protein_coding protein_coding MGP_129S1SvImJ_T0045196.1 MGP_129S1SvImJ_G0023059.1 mouse_genomes_project 16 93695842 93790620 - MGP_129S1SvImJ_P0045196 Runx1 protein_coding protein_coding MGP_129S1SvImJ_T0045197.1 MGP_129S1SvImJ_G0023059.1 mouse_genomes_project 16 93697584 93789417 - MGP_129S1SvImJ_P0045197 Runx1 protein_coding protein_coding MGP_129S1SvImJ_T0045198.1 MGP_129S1SvImJ_G0023059.1 mouse_genomes_project 16 93780256 93788787 - MGP_129S1SvImJ_P0045198 Runx1 protein_coding protein_coding MGP_129S1SvImJ_T0045199.1 MGP_129S1SvImJ_G0023059.1 mouse_genomes_project 16 93780289 93790617 - Runx1 protein_coding retained_intron MGP_129S1SvImJ_T0045200.1 MGP_129S1SvImJ_G0023059.1 mouse_genomes_project 16 93788883 93925508 - MGP_129S1SvImJ_P0045200 Runx1 protein_coding protein_coding MGP_129S1SvImJ_T0045201.1 MGP_129S1SvImJ_G0023059.1 mouse_genomes_project 16 93915157 93925804 - MGP_129S1SvImJ_P0045201 Runx1 protein_coding protein_coding MGP_129S1SvImJ_T0042892.1 MGP_129S1SvImJ_G0022452.1 mouse_genomes_project 16 298550 306054 - Zfp597 protein_coding processed_transcript MGP_129S1SvImJ_T0042893.1 MGP_129S1SvImJ_G0022452.1 mouse_genomes_project 16 301757 312953 - MGP_129S1SvImJ_P0042893 Zfp597 protein_coding protein_coding MGP_129S1SvImJ_T0042894.1 MGP_129S1SvImJ_G0022452.1 mouse_genomes_project 16 302613 327463 - Zfp597 protein_coding processed_transcript MGP_129S1SvImJ_T0042895.1 MGP_129S1SvImJ_G0022452.1 mouse_genomes_project 16 305519 327519 - Zfp597 protein_coding processed_transcript MGP_129S1SvImJ_T0042896.1 MGP_129S1SvImJ_G0022452.1 mouse_genomes_project 16 306818 312290 - Zfp597 protein_coding retained_intron MGP_129S1SvImJ_T0044253.1 MGP_129S1SvImJ_G0022774.1 mouse_genomes_project 16 34291704 34325694 + MGP_129S1SvImJ_P0044253 Parp9 protein_coding protein_coding MGP_129S1SvImJ_T0044254.1 MGP_129S1SvImJ_G0022774.1 mouse_genomes_project 16 34291722 34300061 + Parp9 protein_coding retained_intron MGP_129S1SvImJ_T0044255.1 MGP_129S1SvImJ_G0022774.1 mouse_genomes_project 16 34291753 34303928 + MGP_129S1SvImJ_P0044255 Parp9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044256.1 MGP_129S1SvImJ_G0022774.1 mouse_genomes_project 16 34293753 34304163 + Parp9 protein_coding processed_transcript MGP_129S1SvImJ_T0044257.1 MGP_129S1SvImJ_G0022774.1 mouse_genomes_project 16 34293841 34330077 + MGP_129S1SvImJ_P0044257 Parp9 protein_coding protein_coding MGP_129S1SvImJ_T0044258.1 MGP_129S1SvImJ_G0022774.1 mouse_genomes_project 16 34304525 34313081 + MGP_129S1SvImJ_P0044258 Parp9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043154.1 MGP_129S1SvImJ_G0022520.1 mouse_genomes_project 16 7923236 7986006 - MGP_129S1SvImJ_P0043154 Txndc11 protein_coding protein_coding MGP_129S1SvImJ_T0043155.1 MGP_129S1SvImJ_G0022520.1 mouse_genomes_project 16 7923750 7933094 - Txndc11 protein_coding retained_intron MGP_129S1SvImJ_T0043156.1 MGP_129S1SvImJ_G0022520.1 mouse_genomes_project 16 7933060 7935661 - Txndc11 protein_coding processed_transcript MGP_129S1SvImJ_T0043157.1 MGP_129S1SvImJ_G0022520.1 mouse_genomes_project 16 7933827 7985967 - MGP_129S1SvImJ_P0043157 Txndc11 protein_coding protein_coding MGP_129S1SvImJ_T0043158.1 MGP_129S1SvImJ_G0022520.1 mouse_genomes_project 16 7935543 7985929 - MGP_129S1SvImJ_P0043158 Txndc11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043159.1 MGP_129S1SvImJ_G0022520.1 mouse_genomes_project 16 7936580 7972055 - Txndc11 protein_coding processed_transcript MGP_129S1SvImJ_T0043160.1 MGP_129S1SvImJ_G0022520.1 mouse_genomes_project 16 7952868 7985909 - MGP_129S1SvImJ_P0043160 Txndc11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043161.1 MGP_129S1SvImJ_G0022520.1 mouse_genomes_project 16 7954214 7986006 - MGP_129S1SvImJ_P0043161 Txndc11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043162.1 MGP_129S1SvImJ_G0022520.1 mouse_genomes_project 16 7963377 7985969 - MGP_129S1SvImJ_P0043162 Txndc11 protein_coding protein_coding MGP_129S1SvImJ_T0043336.1 MGP_129S1SvImJ_G0022563.1 mouse_genomes_project 16 13960061 13964912 - protein_coding processed_transcript MGP_129S1SvImJ_T0043337.1 MGP_129S1SvImJ_G0022563.1 mouse_genomes_project 16 13960062 13963324 - MGP_129S1SvImJ_P0043337 protein_coding protein_coding MGP_129S1SvImJ_T0044299.1 MGP_129S1SvImJ_G0022792.1 mouse_genomes_project 16 35156440 35192265 - MGP_129S1SvImJ_P0044299 Slc15a2 protein_coding protein_coding MGP_129S1SvImJ_T0044300.1 MGP_129S1SvImJ_G0022792.1 mouse_genomes_project 16 35158040 35192123 - MGP_129S1SvImJ_P0044300 Slc15a2 protein_coding protein_coding MGP_129S1SvImJ_T0044301.1 MGP_129S1SvImJ_G0022792.1 mouse_genomes_project 16 35158040 35192095 - MGP_129S1SvImJ_P0044301 Slc15a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044302.1 MGP_129S1SvImJ_G0022792.1 mouse_genomes_project 16 35158578 35161019 - Slc15a2 protein_coding retained_intron MGP_129S1SvImJ_T0044303.1 MGP_129S1SvImJ_G0022792.1 mouse_genomes_project 16 35160718 35161668 - Slc15a2 protein_coding processed_transcript MGP_129S1SvImJ_T0044304.1 MGP_129S1SvImJ_G0022792.1 mouse_genomes_project 16 35162158 35162965 - Slc15a2 protein_coding retained_intron MGP_129S1SvImJ_T0044305.1 MGP_129S1SvImJ_G0022792.1 mouse_genomes_project 16 35163382 35169115 - Slc15a2 protein_coding retained_intron MGP_129S1SvImJ_T0044306.1 MGP_129S1SvImJ_G0022792.1 mouse_genomes_project 16 35163429 35168925 - Slc15a2 protein_coding retained_intron MGP_129S1SvImJ_T0044307.1 MGP_129S1SvImJ_G0022792.1 mouse_genomes_project 16 35167459 35168841 - Slc15a2 protein_coding retained_intron MGP_129S1SvImJ_T0044308.1 MGP_129S1SvImJ_G0022792.1 mouse_genomes_project 16 35179175 35192243 - MGP_129S1SvImJ_P0044308 Slc15a2 protein_coding protein_coding MGP_129S1SvImJ_T0044309.1 MGP_129S1SvImJ_G0022792.1 mouse_genomes_project 16 35179178 35192227 - MGP_129S1SvImJ_P0044309 Slc15a2 protein_coding protein_coding MGP_129S1SvImJ_T0044310.1 MGP_129S1SvImJ_G0022792.1 mouse_genomes_project 16 35179372 35180580 - Slc15a2 protein_coding retained_intron MGP_129S1SvImJ_T0044311.1 MGP_129S1SvImJ_G0022792.1 mouse_genomes_project 16 35188688 35189768 - Slc15a2 protein_coding retained_intron MGP_129S1SvImJ_T0044737.1 MGP_129S1SvImJ_G0022900.1 mouse_genomes_project 16 56779310 56920505 - MGP_129S1SvImJ_P0044737 Col8a1 protein_coding protein_coding MGP_129S1SvImJ_T0044512.1 MGP_129S1SvImJ_G0022839.1 mouse_genomes_project 16 43146996 43156493 + Cfap44 protein_coding retained_intron MGP_129S1SvImJ_T0044513.1 MGP_129S1SvImJ_G0022839.1 mouse_genomes_project 16 43146999 43235467 + MGP_129S1SvImJ_P0044513 Cfap44 protein_coding protein_coding MGP_129S1SvImJ_T0044514.1 MGP_129S1SvImJ_G0022839.1 mouse_genomes_project 16 43147022 43153554 + Cfap44 protein_coding retained_intron MGP_129S1SvImJ_T0044515.1 MGP_129S1SvImJ_G0022839.1 mouse_genomes_project 16 43152980 43235133 + MGP_129S1SvImJ_P0044515 Cfap44 protein_coding protein_coding MGP_129S1SvImJ_T0044516.1 MGP_129S1SvImJ_G0022839.1 mouse_genomes_project 16 43160175 43184644 + Cfap44 protein_coding retained_intron MGP_129S1SvImJ_T0044517.1 MGP_129S1SvImJ_G0022839.1 mouse_genomes_project 16 43186627 43191803 + Cfap44 protein_coding processed_transcript MGP_129S1SvImJ_T0044518.1 MGP_129S1SvImJ_G0022839.1 mouse_genomes_project 16 43208669 43235133 + MGP_129S1SvImJ_P0044518 Cfap44 protein_coding protein_coding MGP_129S1SvImJ_T0044519.1 MGP_129S1SvImJ_G0022839.1 mouse_genomes_project 16 43223210 43235467 + Cfap44 protein_coding retained_intron MGP_129S1SvImJ_T0043118.1 MGP_129S1SvImJ_G0022507.1 mouse_genomes_project 16 7213194 7246064 - MGP_129S1SvImJ_P0043118 Tvp23a protein_coding protein_coding MGP_129S1SvImJ_T0043120.1 MGP_129S1SvImJ_G0022507.1 mouse_genomes_project 16 7215881 7245847 - MGP_129S1SvImJ_P0043120 Tvp23a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043121.1 MGP_129S1SvImJ_G0022507.1 mouse_genomes_project 16 7216848 7246029 - Tvp23a protein_coding processed_transcript MGP_129S1SvImJ_T0043122.1 MGP_129S1SvImJ_G0022507.1 mouse_genomes_project 16 7219666 7222977 - Tvp23a protein_coding processed_transcript MGP_129S1SvImJ_T0043123.1 MGP_129S1SvImJ_G0022507.1 mouse_genomes_project 16 7220842 7223053 - Tvp23a protein_coding processed_transcript MGP_129S1SvImJ_T0099509.1 MGP_129S1SvImJ_G0037576.1 mouse_genomes_project 16 34510005 34510108 - Gm23080 snRNA snRNA MGP_129S1SvImJ_T0013158.1 MGP_129S1SvImJ_G0011247.1 mouse_genomes_project 16 14197162 14197855 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013195.1 MGP_129S1SvImJ_G0011284.1 mouse_genomes_project 16 42006774 42007298 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006848.1 MGP_129S1SvImJ_G0005649.1 mouse_genomes_project 16 19365899 19366755 - 2610020F03Rik lincRNA lincRNA MGP_129S1SvImJ_T0100792.1 MGP_129S1SvImJ_G0038859.1 mouse_genomes_project 16 51938449 51938575 - Gm25723 snoRNA snoRNA MGP_129S1SvImJ_T0043805.1 MGP_129S1SvImJ_G0022657.1 mouse_genomes_project 16 18445561 18446866 - MGP_129S1SvImJ_P0043805 Teddm3 protein_coding protein_coding MGP_129S1SvImJ_T0099529.1 MGP_129S1SvImJ_G0037596.1 mouse_genomes_project 16 61968686 61968790 + Gm24164 snRNA snRNA MGP_129S1SvImJ_T0099517.1 MGP_129S1SvImJ_G0037584.1 mouse_genomes_project 16 34838507 34838610 + Gm25903 snRNA snRNA MGP_129S1SvImJ_T0006837.1 MGP_129S1SvImJ_G0005641.1 mouse_genomes_project 16 9760038 9796774 + 1700003L19Rik lincRNA lincRNA MGP_129S1SvImJ_T0100791.1 MGP_129S1SvImJ_G0038858.1 mouse_genomes_project 16 51043771 51043904 - Gm23513 snoRNA snoRNA MGP_129S1SvImJ_T0013186.1 MGP_129S1SvImJ_G0011275.1 mouse_genomes_project 16 37044547 37046268 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013148.1 MGP_129S1SvImJ_G0011237.1 mouse_genomes_project 16 11033390 11034345 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013209.1 MGP_129S1SvImJ_G0011298.1 mouse_genomes_project 16 60396217 60396456 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099520.1 MGP_129S1SvImJ_G0037587.1 mouse_genomes_project 16 38911703 38911797 + Gm22543 snRNA snRNA MGP_129S1SvImJ_T0043453.1 MGP_129S1SvImJ_G0022583.1 mouse_genomes_project 16 14684944 14688099 - MGP_129S1SvImJ_P0043453 Thap7 protein_coding protein_coding MGP_129S1SvImJ_T0043454.1 MGP_129S1SvImJ_G0022583.1 mouse_genomes_project 16 14685148 14688075 - Thap7 protein_coding retained_intron MGP_129S1SvImJ_T0043455.1 MGP_129S1SvImJ_G0022583.1 mouse_genomes_project 16 14685212 14688015 - Thap7 protein_coding retained_intron MGP_129S1SvImJ_T0043456.1 MGP_129S1SvImJ_G0022583.1 mouse_genomes_project 16 14685306 14687644 - Thap7 protein_coding retained_intron MGP_129S1SvImJ_T0043457.1 MGP_129S1SvImJ_G0022583.1 mouse_genomes_project 16 14685463 14686111 - Thap7 protein_coding retained_intron MGP_129S1SvImJ_T0043458.1 MGP_129S1SvImJ_G0022583.1 mouse_genomes_project 16 14685544 14688018 - MGP_129S1SvImJ_P0043458 Thap7 protein_coding protein_coding MGP_129S1SvImJ_T0043459.1 MGP_129S1SvImJ_G0022583.1 mouse_genomes_project 16 14685965 14687619 - Thap7 protein_coding retained_intron MGP_129S1SvImJ_T0044902.1 MGP_129S1SvImJ_G0022963.1 mouse_genomes_project 16 78711154 78740775 - MGP_129S1SvImJ_P0044902 D16Ertd472e protein_coding protein_coding MGP_129S1SvImJ_T0044903.1 MGP_129S1SvImJ_G0022963.1 mouse_genomes_project 16 78711831 78740775 - MGP_129S1SvImJ_P0044903 D16Ertd472e protein_coding protein_coding MGP_129S1SvImJ_T0044904.1 MGP_129S1SvImJ_G0022963.1 mouse_genomes_project 16 78712103 78740775 - MGP_129S1SvImJ_P0044904 D16Ertd472e protein_coding protein_coding MGP_129S1SvImJ_T0045236.1 MGP_129S1SvImJ_G0023069.1 mouse_genomes_project 16 95562966 95574096 + MGP_129S1SvImJ_P0045236 Ripply3 protein_coding protein_coding MGP_129S1SvImJ_T0043389.1 MGP_129S1SvImJ_G0022571.1 mouse_genomes_project 16 14263879 14272045 - MGP_129S1SvImJ_P0043389 Ccdc116 protein_coding protein_coding MGP_129S1SvImJ_T0043390.1 MGP_129S1SvImJ_G0022571.1 mouse_genomes_project 16 14264048 14270007 - MGP_129S1SvImJ_P0043390 Ccdc116 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0043391.1 MGP_129S1SvImJ_G0022571.1 mouse_genomes_project 16 14265851 14269025 - MGP_129S1SvImJ_P0043391 Ccdc116 protein_coding protein_coding MGP_129S1SvImJ_T0043392.1 MGP_129S1SvImJ_G0022571.1 mouse_genomes_project 16 14265852 14269239 - MGP_129S1SvImJ_P0043392 Ccdc116 protein_coding protein_coding MGP_129S1SvImJ_T0043393.1 MGP_129S1SvImJ_G0022571.1 mouse_genomes_project 16 14267536 14269254 - Ccdc116 protein_coding processed_transcript MGP_129S1SvImJ_T0043855.1 MGP_129S1SvImJ_G0022673.1 mouse_genomes_project 16 20384056 20401072 + MGP_129S1SvImJ_P0043855 Dnajb11 protein_coding protein_coding MGP_129S1SvImJ_T0043856.1 MGP_129S1SvImJ_G0022673.1 mouse_genomes_project 16 20384056 20400995 + MGP_129S1SvImJ_P0043856 Dnajb11 protein_coding protein_coding MGP_129S1SvImJ_T0043857.1 MGP_129S1SvImJ_G0022673.1 mouse_genomes_project 16 20384056 20408241 + MGP_129S1SvImJ_P0043857 Dnajb11 protein_coding protein_coding MGP_129S1SvImJ_T0043858.1 MGP_129S1SvImJ_G0022673.1 mouse_genomes_project 16 20384117 20400711 + Dnajb11 protein_coding processed_transcript MGP_129S1SvImJ_T0043859.1 MGP_129S1SvImJ_G0022673.1 mouse_genomes_project 16 20398033 20400913 + Dnajb11 protein_coding processed_transcript MGP_129S1SvImJ_T0100775.1 MGP_129S1SvImJ_G0038842.1 mouse_genomes_project 16 20671369 20671547 + Snora81 snoRNA snoRNA MGP_129S1SvImJ_T0013185.1 MGP_129S1SvImJ_G0011274.1 mouse_genomes_project 16 35645957 35646804 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010142.1 MGP_129S1SvImJ_G0008258.1 mouse_genomes_project 16 17941874 17941959 + Mir1224 miRNA miRNA MGP_129S1SvImJ_T0045234.1 MGP_129S1SvImJ_G0023067.1 mouse_genomes_project 16 95301133 95346894 + MGP_129S1SvImJ_P0045234 Sim2 protein_coding protein_coding MGP_129S1SvImJ_T0044840.1 MGP_129S1SvImJ_G0022942.1 mouse_genomes_project 16 64364802 64372348 + MGP_129S1SvImJ_P0044840 Cggbp1 protein_coding protein_coding MGP_129S1SvImJ_T0044841.1 MGP_129S1SvImJ_G0022942.1 mouse_genomes_project 16 64365542 64368827 + Cggbp1 protein_coding retained_intron MGP_129S1SvImJ_T0045094.1 MGP_129S1SvImJ_G0023040.1 mouse_genomes_project 16 92410633 92432353 + MGP_129S1SvImJ_P0045094 Il10rb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045095.1 MGP_129S1SvImJ_G0023040.1 mouse_genomes_project 16 92410704 92432365 + MGP_129S1SvImJ_P0045095 Il10rb protein_coding protein_coding MGP_129S1SvImJ_T0045096.1 MGP_129S1SvImJ_G0023040.1 mouse_genomes_project 16 92410789 92426756 + Il10rb protein_coding retained_intron MGP_129S1SvImJ_T0045097.1 MGP_129S1SvImJ_G0023040.1 mouse_genomes_project 16 92410789 92431373 + MGP_129S1SvImJ_P0045097 Il10rb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045098.1 MGP_129S1SvImJ_G0023040.1 mouse_genomes_project 16 92410913 92421157 + Il10rb protein_coding processed_transcript MGP_129S1SvImJ_T0100814.1 MGP_129S1SvImJ_G0038881.1 mouse_genomes_project 16 91547772 91547894 + Gm23406 snoRNA snoRNA MGP_129S1SvImJ_T0045353.1 MGP_129S1SvImJ_G0023084.1 mouse_genomes_project 16 97606487 97695144 + MGP_129S1SvImJ_P0045353 B3galt5 protein_coding protein_coding MGP_129S1SvImJ_T0045354.1 MGP_129S1SvImJ_G0023084.1 mouse_genomes_project 16 97643552 97689062 + B3galt5 protein_coding processed_transcript MGP_129S1SvImJ_T0045355.1 MGP_129S1SvImJ_G0023084.1 mouse_genomes_project 16 97643689 97689063 + B3galt5 protein_coding processed_transcript MGP_129S1SvImJ_T0045356.1 MGP_129S1SvImJ_G0023084.1 mouse_genomes_project 16 97650876 97695142 + MGP_129S1SvImJ_P0045356 B3galt5 protein_coding protein_coding MGP_129S1SvImJ_T0098324.1 MGP_129S1SvImJ_G0036409.1 mouse_genomes_project 16 34637034 34637128 - pseudogene pseudogene MGP_129S1SvImJ_T0044760.1 MGP_129S1SvImJ_G0022904.1 mouse_genomes_project 16 57819158 57822731 - MGP_129S1SvImJ_P0044760 E330017A01Rik protein_coding protein_coding MGP_129S1SvImJ_T0043566.1 MGP_129S1SvImJ_G0022607.1 mouse_genomes_project 16 15461211 15504650 - MGP_129S1SvImJ_P0043566 Dgcr8 protein_coding protein_coding MGP_129S1SvImJ_T0043567.1 MGP_129S1SvImJ_G0022607.1 mouse_genomes_project 16 15461220 15504653 - MGP_129S1SvImJ_P0043567 Dgcr8 protein_coding protein_coding MGP_129S1SvImJ_T0043568.1 MGP_129S1SvImJ_G0022607.1 mouse_genomes_project 16 15462204 15480119 - Dgcr8 protein_coding processed_transcript MGP_129S1SvImJ_T0043569.1 MGP_129S1SvImJ_G0022607.1 mouse_genomes_project 16 15462705 15466746 - Dgcr8 protein_coding processed_transcript MGP_129S1SvImJ_T0043570.1 MGP_129S1SvImJ_G0022607.1 mouse_genomes_project 16 15486091 15499967 - Dgcr8 protein_coding retained_intron MGP_129S1SvImJ_T0043571.1 MGP_129S1SvImJ_G0022607.1 mouse_genomes_project 16 15486274 15495650 - Dgcr8 protein_coding retained_intron MGP_129S1SvImJ_T0043572.1 MGP_129S1SvImJ_G0022607.1 mouse_genomes_project 16 15502986 15504574 - Dgcr8 protein_coding processed_transcript MGP_129S1SvImJ_T0045035.1 MGP_129S1SvImJ_G0023024.1 mouse_genomes_project 16 91140090 91145671 + MGP_129S1SvImJ_P0045035 Sod1 protein_coding protein_coding MGP_129S1SvImJ_T0043464.1 MGP_129S1SvImJ_G0022585.1 mouse_genomes_project 16 14720363 14730488 + MGP_129S1SvImJ_P0043464 P2rx6 protein_coding protein_coding MGP_129S1SvImJ_T0043465.1 MGP_129S1SvImJ_G0022585.1 mouse_genomes_project 16 14720363 14729577 + MGP_129S1SvImJ_P0043465 P2rx6 protein_coding protein_coding MGP_129S1SvImJ_T0043466.1 MGP_129S1SvImJ_G0022585.1 mouse_genomes_project 16 14720411 14736277 + MGP_129S1SvImJ_P0043466 P2rx6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043068.1 MGP_129S1SvImJ_G0022493.1 mouse_genomes_project 16 5171767 5285918 + MGP_129S1SvImJ_P0043068 Abat protein_coding protein_coding MGP_129S1SvImJ_T0043069.1 MGP_129S1SvImJ_G0022493.1 mouse_genomes_project 16 5171819 5267400 + MGP_129S1SvImJ_P0043069 Abat protein_coding protein_coding MGP_129S1SvImJ_T0043070.1 MGP_129S1SvImJ_G0022493.1 mouse_genomes_project 16 5171821 5243718 + Abat protein_coding retained_intron MGP_129S1SvImJ_T0043071.1 MGP_129S1SvImJ_G0022493.1 mouse_genomes_project 16 5171823 5283920 + MGP_129S1SvImJ_P0043071 Abat protein_coding protein_coding MGP_129S1SvImJ_T0043072.1 MGP_129S1SvImJ_G0022493.1 mouse_genomes_project 16 5235927 5269984 + MGP_129S1SvImJ_P0043072 Abat protein_coding protein_coding MGP_129S1SvImJ_T0043073.1 MGP_129S1SvImJ_G0022493.1 mouse_genomes_project 16 5246633 5267400 + MGP_129S1SvImJ_P0043073 Abat protein_coding protein_coding MGP_129S1SvImJ_T0043074.1 MGP_129S1SvImJ_G0022493.1 mouse_genomes_project 16 5277228 5282927 + Abat protein_coding processed_transcript MGP_129S1SvImJ_T0003691.1 MGP_129S1SvImJ_G0003340.1 mouse_genomes_project 16 32012234 32021882 - Gm15657 antisense antisense MGP_129S1SvImJ_T0003692.1 MGP_129S1SvImJ_G0003340.1 mouse_genomes_project 16 32020175 32021880 - Gm15657 antisense antisense MGP_129S1SvImJ_T0003693.1 MGP_129S1SvImJ_G0003340.1 mouse_genomes_project 16 32020506 32022658 - Gm15657 antisense antisense MGP_129S1SvImJ_T0045038.1 MGP_129S1SvImJ_G0023026.1 mouse_genomes_project 16 91309563 91440831 + MGP_129S1SvImJ_P0045038 Hunk protein_coding protein_coding MGP_129S1SvImJ_T0043113.1 MGP_129S1SvImJ_G0022506.1 mouse_genomes_project 16 7204589 7217066 + MGP_129S1SvImJ_P0043113 Nubp1 protein_coding protein_coding MGP_129S1SvImJ_T0043114.1 MGP_129S1SvImJ_G0022506.1 mouse_genomes_project 16 7204590 7214310 + Nubp1 protein_coding processed_transcript MGP_129S1SvImJ_T0043115.1 MGP_129S1SvImJ_G0022506.1 mouse_genomes_project 16 7204595 7213189 + Nubp1 protein_coding retained_intron MGP_129S1SvImJ_T0043116.1 MGP_129S1SvImJ_G0022506.1 mouse_genomes_project 16 7204611 7217066 + Nubp1 protein_coding retained_intron MGP_129S1SvImJ_T0043117.1 MGP_129S1SvImJ_G0022506.1 mouse_genomes_project 16 7204705 7214075 + Nubp1 protein_coding retained_intron MGP_129S1SvImJ_T0043119.1 MGP_129S1SvImJ_G0022506.1 mouse_genomes_project 16 7213873 7215984 + Nubp1 protein_coding processed_transcript MGP_129S1SvImJ_T0044897.1 MGP_129S1SvImJ_G0022959.1 mouse_genomes_project 16 77990675 77997195 + MGP_129S1SvImJ_P0044897 Gm17333 protein_coding protein_coding MGP_129S1SvImJ_T0017531.1 MGP_129S1SvImJ_G0015320.1 mouse_genomes_project 16 55060774 55076669 + Gm28037 processed_transcript processed_transcript MGP_129S1SvImJ_T0010144.1 MGP_129S1SvImJ_G0008260.1 mouse_genomes_project 16 20043087 20043216 - Mir8095 miRNA miRNA MGP_129S1SvImJ_T0044822.1 MGP_129S1SvImJ_G0022934.1 mouse_genomes_project 16 62129685 62181031 - MGP_129S1SvImJ_P0044822 Nsun3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044823.1 MGP_129S1SvImJ_G0022934.1 mouse_genomes_project 16 62129685 62181031 - MGP_129S1SvImJ_P0044823 Nsun3 protein_coding protein_coding MGP_129S1SvImJ_T0044824.1 MGP_129S1SvImJ_G0022934.1 mouse_genomes_project 16 62132401 62161377 - Nsun3 protein_coding processed_transcript MGP_129S1SvImJ_T0044825.1 MGP_129S1SvImJ_G0022934.1 mouse_genomes_project 16 62164945 62181020 - MGP_129S1SvImJ_P0044825 Nsun3 protein_coding protein_coding MGP_129S1SvImJ_T0044826.1 MGP_129S1SvImJ_G0022934.1 mouse_genomes_project 16 62170419 62181072 - Nsun3 protein_coding processed_transcript MGP_129S1SvImJ_T0044827.1 MGP_129S1SvImJ_G0022934.1 mouse_genomes_project 16 62173504 62180967 - Nsun3 protein_coding processed_transcript MGP_129S1SvImJ_T0013170.1 MGP_129S1SvImJ_G0011259.1 mouse_genomes_project 16 19711292 19711809 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0043667.1 MGP_129S1SvImJ_G0022632.1 mouse_genomes_project 16 16934712 16982694 - MGP_129S1SvImJ_P0043667 Lamp3 protein_coding protein_coding MGP_129S1SvImJ_T0003701.1 MGP_129S1SvImJ_G0003347.1 mouse_genomes_project 16 37104821 37108719 - Gm17103 antisense antisense MGP_129S1SvImJ_T0045391.1 MGP_129S1SvImJ_G0023096.1 mouse_genomes_project 16 99411351 99426545 - MGP_129S1SvImJ_P0045391 Zbtb21 protein_coding protein_coding MGP_129S1SvImJ_T0045392.1 MGP_129S1SvImJ_G0023096.1 mouse_genomes_project 16 99411351 99426545 - MGP_129S1SvImJ_P0045392 Zbtb21 protein_coding protein_coding MGP_129S1SvImJ_T0045393.1 MGP_129S1SvImJ_G0023096.1 mouse_genomes_project 16 99411351 99426545 - MGP_129S1SvImJ_P0045393 Zbtb21 protein_coding protein_coding MGP_129S1SvImJ_T0044533.1 MGP_129S1SvImJ_G0022844.1 mouse_genomes_project 16 43590049 43616446 + MGP_129S1SvImJ_P0044533 Cd200r4 protein_coding protein_coding MGP_129S1SvImJ_T0044534.1 MGP_129S1SvImJ_G0022844.1 mouse_genomes_project 16 43590072 43616445 + MGP_129S1SvImJ_P0044534 Cd200r4 protein_coding protein_coding MGP_129S1SvImJ_T0044535.1 MGP_129S1SvImJ_G0022844.1 mouse_genomes_project 16 43598965 43616462 + MGP_129S1SvImJ_P0044535 Cd200r4 protein_coding protein_coding MGP_129S1SvImJ_T0043388.1 MGP_129S1SvImJ_G0022570.1 mouse_genomes_project 16 14255222 14257467 - MGP_129S1SvImJ_P0043388 Sdf2l1 protein_coding protein_coding MGP_129S1SvImJ_T0042946.1 MGP_129S1SvImJ_G0022461.1 mouse_genomes_project 16 542797 680449 - MGP_129S1SvImJ_P0042946 Crebbp protein_coding protein_coding MGP_129S1SvImJ_T0042947.1 MGP_129S1SvImJ_G0022461.1 mouse_genomes_project 16 545170 679135 - MGP_129S1SvImJ_P0042947 Crebbp protein_coding protein_coding MGP_129S1SvImJ_T0042948.1 MGP_129S1SvImJ_G0022461.1 mouse_genomes_project 16 548079 551201 - Crebbp protein_coding retained_intron MGP_129S1SvImJ_T0042949.1 MGP_129S1SvImJ_G0022461.1 mouse_genomes_project 16 549258 550053 - Crebbp protein_coding retained_intron MGP_129S1SvImJ_T0042950.1 MGP_129S1SvImJ_G0022461.1 mouse_genomes_project 16 549837 557493 - MGP_129S1SvImJ_P0042950 Crebbp protein_coding protein_coding MGP_129S1SvImJ_T0042951.1 MGP_129S1SvImJ_G0022461.1 mouse_genomes_project 16 553296 591741 - MGP_129S1SvImJ_P0042951 Crebbp protein_coding protein_coding MGP_129S1SvImJ_T0042952.1 MGP_129S1SvImJ_G0022461.1 mouse_genomes_project 16 553647 558975 - MGP_129S1SvImJ_P0042952 Crebbp protein_coding protein_coding MGP_129S1SvImJ_T0042953.1 MGP_129S1SvImJ_G0022461.1 mouse_genomes_project 16 581780 589722 - MGP_129S1SvImJ_P0042953 Crebbp protein_coding protein_coding MGP_129S1SvImJ_T0000994.1 MGP_129S1SvImJ_G0000924.1 mouse_genomes_project 16 77662128 77664452 + TEC TEC MGP_129S1SvImJ_T0098517.1 MGP_129S1SvImJ_G0036602.1 mouse_genomes_project 16 13113147 13113257 - n-R5s31 rRNA rRNA MGP_129S1SvImJ_T0043049.1 MGP_129S1SvImJ_G0022488.1 mouse_genomes_project 16 1763420 1774703 + MGP_129S1SvImJ_P0043049 Alg1 protein_coding protein_coding MGP_129S1SvImJ_T0043050.1 MGP_129S1SvImJ_G0022488.1 mouse_genomes_project 16 1763437 1769538 + Alg1 protein_coding retained_intron MGP_129S1SvImJ_T0043051.1 MGP_129S1SvImJ_G0022488.1 mouse_genomes_project 16 1763437 1774712 + MGP_129S1SvImJ_P0043051 Alg1 protein_coding protein_coding MGP_129S1SvImJ_T0043052.1 MGP_129S1SvImJ_G0022488.1 mouse_genomes_project 16 1764969 1770318 + Alg1 protein_coding processed_transcript MGP_129S1SvImJ_T0043053.1 MGP_129S1SvImJ_G0022488.1 mouse_genomes_project 16 1769873 1773524 + Alg1 protein_coding retained_intron MGP_129S1SvImJ_T0098523.1 MGP_129S1SvImJ_G0036608.1 mouse_genomes_project 16 60706128 60706246 - n-R5s37 rRNA rRNA MGP_129S1SvImJ_T0043001.1 MGP_129S1SvImJ_G0022472.1 mouse_genomes_project 16 1272404 1296983 - MGP_129S1SvImJ_P0043001 Cdip1 protein_coding protein_coding MGP_129S1SvImJ_T0043002.1 MGP_129S1SvImJ_G0022472.1 mouse_genomes_project 16 1273784 1278456 - Cdip1 protein_coding retained_intron MGP_129S1SvImJ_T0043003.1 MGP_129S1SvImJ_G0022472.1 mouse_genomes_project 16 1273784 1297285 - MGP_129S1SvImJ_P0043003 Cdip1 protein_coding protein_coding MGP_129S1SvImJ_T0043004.1 MGP_129S1SvImJ_G0022472.1 mouse_genomes_project 16 1274282 1296923 - MGP_129S1SvImJ_P0043004 Cdip1 protein_coding protein_coding MGP_129S1SvImJ_T0043005.1 MGP_129S1SvImJ_G0022472.1 mouse_genomes_project 16 1276252 1297259 - Cdip1 protein_coding retained_intron MGP_129S1SvImJ_T0043924.1 MGP_129S1SvImJ_G0022692.1 mouse_genomes_project 16 23672351 23824399 - MGP_129S1SvImJ_P0043924 P3h2 protein_coding protein_coding MGP_129S1SvImJ_T0043925.1 MGP_129S1SvImJ_G0022692.1 mouse_genomes_project 16 23685394 23697822 - P3h2 protein_coding retained_intron MGP_129S1SvImJ_T0043926.1 MGP_129S1SvImJ_G0022692.1 mouse_genomes_project 16 23698151 23705439 - P3h2 protein_coding processed_transcript MGP_129S1SvImJ_T0013169.1 MGP_129S1SvImJ_G0011258.1 mouse_genomes_project 16 19520504 19520928 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0044312.1 MGP_129S1SvImJ_G0022793.1 mouse_genomes_project 16 35201910 35296503 - Eaf2 protein_coding processed_transcript MGP_129S1SvImJ_T0044313.1 MGP_129S1SvImJ_G0022793.1 mouse_genomes_project 16 35201911 35296503 - Eaf2 protein_coding processed_transcript MGP_129S1SvImJ_T0044314.1 MGP_129S1SvImJ_G0022793.1 mouse_genomes_project 16 35201912 35219016 - MGP_129S1SvImJ_P0044314 Eaf2 protein_coding protein_coding MGP_129S1SvImJ_T0044315.1 MGP_129S1SvImJ_G0022793.1 mouse_genomes_project 16 35201991 35240529 - Eaf2 protein_coding processed_transcript MGP_129S1SvImJ_T0044316.1 MGP_129S1SvImJ_G0022793.1 mouse_genomes_project 16 35202046 35240474 - MGP_129S1SvImJ_P0044316 Eaf2 protein_coding protein_coding MGP_129S1SvImJ_T0044317.1 MGP_129S1SvImJ_G0022793.1 mouse_genomes_project 16 35233294 35296314 - Eaf2 protein_coding retained_intron MGP_129S1SvImJ_T0043387.1 MGP_129S1SvImJ_G0022569.1 mouse_genomes_project 16 14237553 14246514 - MGP_129S1SvImJ_P0043387 2610318N02Rik protein_coding protein_coding MGP_129S1SvImJ_T0043904.1 MGP_129S1SvImJ_G0022683.1 mouse_genomes_project 16 21012134 21016962 + MGP_129S1SvImJ_P0043904 Rtp1 protein_coding protein_coding MGP_129S1SvImJ_T0043694.1 MGP_129S1SvImJ_G0022640.1 mouse_genomes_project 16 17622084 17636583 - protein_coding processed_transcript MGP_129S1SvImJ_T0043695.1 MGP_129S1SvImJ_G0022640.1 mouse_genomes_project 16 17622084 17636640 - MGP_129S1SvImJ_P0043695 protein_coding protein_coding MGP_129S1SvImJ_T0043696.1 MGP_129S1SvImJ_G0022640.1 mouse_genomes_project 16 17623367 17627908 - protein_coding processed_transcript MGP_129S1SvImJ_T0043697.1 MGP_129S1SvImJ_G0022640.1 mouse_genomes_project 16 17623473 17630448 - MGP_129S1SvImJ_P0043697 protein_coding protein_coding MGP_129S1SvImJ_T0043698.1 MGP_129S1SvImJ_G0022640.1 mouse_genomes_project 16 17628717 17629749 - protein_coding processed_transcript MGP_129S1SvImJ_T0044537.1 MGP_129S1SvImJ_G0022846.1 mouse_genomes_project 16 43715392 43737341 + MGP_129S1SvImJ_P0044537 Cd200r3 protein_coding protein_coding MGP_129S1SvImJ_T0044538.1 MGP_129S1SvImJ_G0022846.1 mouse_genomes_project 16 43715392 43738027 + MGP_129S1SvImJ_P0044538 Cd200r3 protein_coding protein_coding MGP_129S1SvImJ_T0044539.1 MGP_129S1SvImJ_G0022846.1 mouse_genomes_project 16 43715392 43737341 + MGP_129S1SvImJ_P0044539 Cd200r3 protein_coding protein_coding MGP_129S1SvImJ_T0044540.1 MGP_129S1SvImJ_G0022846.1 mouse_genomes_project 16 43715392 43738734 + MGP_129S1SvImJ_P0044540 Cd200r3 protein_coding protein_coding MGP_129S1SvImJ_T0044541.1 MGP_129S1SvImJ_G0022846.1 mouse_genomes_project 16 43715392 43738027 + MGP_129S1SvImJ_P0044541 Cd200r3 protein_coding protein_coding MGP_129S1SvImJ_T0044542.1 MGP_129S1SvImJ_G0022846.1 mouse_genomes_project 16 43715406 43758231 + MGP_129S1SvImJ_P0044542 Cd200r3 protein_coding protein_coding MGP_129S1SvImJ_T0044543.1 MGP_129S1SvImJ_G0022846.1 mouse_genomes_project 16 43715420 43758203 + MGP_129S1SvImJ_P0044543 Cd200r3 protein_coding protein_coding MGP_129S1SvImJ_T0044544.1 MGP_129S1SvImJ_G0022846.1 mouse_genomes_project 16 43715456 43738949 + MGP_129S1SvImJ_P0044544 Cd200r3 protein_coding protein_coding MGP_129S1SvImJ_T0044545.1 MGP_129S1SvImJ_G0022846.1 mouse_genomes_project 16 43715463 43733526 + MGP_129S1SvImJ_P0044545 Cd200r3 protein_coding protein_coding MGP_129S1SvImJ_T0044546.1 MGP_129S1SvImJ_G0022846.1 mouse_genomes_project 16 43737912 43739513 + Cd200r3 protein_coding retained_intron MGP_129S1SvImJ_T0006838.1 MGP_129S1SvImJ_G0005642.1 mouse_genomes_project 16 10479931 10486220 - 2310015D24Rik lincRNA lincRNA MGP_129S1SvImJ_T0006839.1 MGP_129S1SvImJ_G0005642.1 mouse_genomes_project 16 10484993 10486908 - 2310015D24Rik lincRNA lincRNA MGP_129S1SvImJ_T0044182.1 MGP_129S1SvImJ_G0022755.1 mouse_genomes_project 16 31575790 31715429 + MGP_129S1SvImJ_P0044182 Zfp148 protein_coding protein_coding MGP_129S1SvImJ_T0044183.1 MGP_129S1SvImJ_G0022755.1 mouse_genomes_project 16 31600653 31707426 + MGP_129S1SvImJ_P0044183 Zfp148 protein_coding protein_coding MGP_129S1SvImJ_T0010141.1 MGP_129S1SvImJ_G0008257.1 mouse_genomes_project 16 17163577 17163679 - Gm27883 miRNA miRNA MGP_129S1SvImJ_T0044745.1 MGP_129S1SvImJ_G0022902.1 mouse_genomes_project 16 57633677 57692932 - MGP_129S1SvImJ_P0044745 St3gal6 protein_coding protein_coding MGP_129S1SvImJ_T0044746.1 MGP_129S1SvImJ_G0022902.1 mouse_genomes_project 16 57635305 57693749 - MGP_129S1SvImJ_P0044746 St3gal6 protein_coding protein_coding MGP_129S1SvImJ_T0044747.1 MGP_129S1SvImJ_G0022902.1 mouse_genomes_project 16 57635764 57693691 - MGP_129S1SvImJ_P0044747 St3gal6 protein_coding protein_coding MGP_129S1SvImJ_T0044748.1 MGP_129S1SvImJ_G0022902.1 mouse_genomes_project 16 57641410 57693059 - St3gal6 protein_coding processed_transcript MGP_129S1SvImJ_T0044749.1 MGP_129S1SvImJ_G0022902.1 mouse_genomes_project 16 57653573 57656578 - St3gal6 protein_coding retained_intron MGP_129S1SvImJ_T0044750.1 MGP_129S1SvImJ_G0022902.1 mouse_genomes_project 16 57656071 57692950 - St3gal6 protein_coding processed_transcript MGP_129S1SvImJ_T0044751.1 MGP_129S1SvImJ_G0022902.1 mouse_genomes_project 16 57656084 57693675 - MGP_129S1SvImJ_P0044751 St3gal6 protein_coding protein_coding MGP_129S1SvImJ_T0044752.1 MGP_129S1SvImJ_G0022902.1 mouse_genomes_project 16 57660843 57693675 - MGP_129S1SvImJ_P0044752 St3gal6 protein_coding protein_coding MGP_129S1SvImJ_T0044753.1 MGP_129S1SvImJ_G0022902.1 mouse_genomes_project 16 57660895 57667392 - St3gal6 protein_coding processed_transcript MGP_129S1SvImJ_T0044754.1 MGP_129S1SvImJ_G0022902.1 mouse_genomes_project 16 57660897 57692850 - St3gal6 protein_coding processed_transcript MGP_129S1SvImJ_T0044755.1 MGP_129S1SvImJ_G0022902.1 mouse_genomes_project 16 57660906 57693640 - St3gal6 protein_coding processed_transcript MGP_129S1SvImJ_T0044756.1 MGP_129S1SvImJ_G0022902.1 mouse_genomes_project 16 57660906 57693230 - St3gal6 protein_coding processed_transcript MGP_129S1SvImJ_T0044757.1 MGP_129S1SvImJ_G0022902.1 mouse_genomes_project 16 57670911 57693264 - St3gal6 protein_coding processed_transcript MGP_129S1SvImJ_T0044758.1 MGP_129S1SvImJ_G0022902.1 mouse_genomes_project 16 57670911 57676947 - St3gal6 protein_coding retained_intron MGP_129S1SvImJ_T0044799.1 MGP_129S1SvImJ_G0022925.1 mouse_genomes_project 16 58537037 58537968 - MGP_129S1SvImJ_P0044799 protein_coding protein_coding MGP_129S1SvImJ_T0043798.1 MGP_129S1SvImJ_G0022654.1 mouse_genomes_project 16 18067605 18072106 + MGP_129S1SvImJ_P0043798 Polr2h protein_coding protein_coding MGP_129S1SvImJ_T0043799.1 MGP_129S1SvImJ_G0022654.1 mouse_genomes_project 16 18068112 18071846 + Polr2h protein_coding processed_transcript MGP_129S1SvImJ_T0006878.1 MGP_129S1SvImJ_G0005673.1 mouse_genomes_project 16 69592321 69596568 - Gm43265 lincRNA lincRNA MGP_129S1SvImJ_T0045244.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607680 95711550 + MGP_129S1SvImJ_P0045244 Ttc3 protein_coding protein_coding MGP_129S1SvImJ_T0045245.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607801 95684228 + MGP_129S1SvImJ_P0045245 Ttc3 protein_coding protein_coding MGP_129S1SvImJ_T0045246.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607805 95643976 + Ttc3 protein_coding retained_intron MGP_129S1SvImJ_T0045247.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607805 95674401 + MGP_129S1SvImJ_P0045247 Ttc3 protein_coding protein_coding MGP_129S1SvImJ_T0045248.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607808 95684233 + MGP_129S1SvImJ_P0045248 Ttc3 protein_coding protein_coding MGP_129S1SvImJ_T0045249.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607811 95658830 + MGP_129S1SvImJ_P0045249 Ttc3 protein_coding protein_coding MGP_129S1SvImJ_T0045250.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607812 95634676 + MGP_129S1SvImJ_P0045250 Ttc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045251.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607813 95656498 + Ttc3 protein_coding processed_transcript MGP_129S1SvImJ_T0045252.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607813 95658758 + MGP_129S1SvImJ_P0045252 Ttc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045253.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607813 95662433 + MGP_129S1SvImJ_P0045253 Ttc3 protein_coding protein_coding MGP_129S1SvImJ_T0045254.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607819 95684240 + MGP_129S1SvImJ_P0045254 Ttc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045255.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607829 95649858 + Ttc3 protein_coding processed_transcript MGP_129S1SvImJ_T0045256.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607829 95684230 + MGP_129S1SvImJ_P0045256 Ttc3 protein_coding protein_coding MGP_129S1SvImJ_T0045257.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607829 95628757 + MGP_129S1SvImJ_P0045257 Ttc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045258.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607829 95624418 + MGP_129S1SvImJ_P0045258 Ttc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045259.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607842 95656096 + MGP_129S1SvImJ_P0045259 Ttc3 protein_coding protein_coding MGP_129S1SvImJ_T0045260.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607843 95684240 + MGP_129S1SvImJ_P0045260 Ttc3 protein_coding protein_coding MGP_129S1SvImJ_T0045261.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607843 95684240 + MGP_129S1SvImJ_P0045261 Ttc3 protein_coding protein_coding MGP_129S1SvImJ_T0045262.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607858 95668022 + MGP_129S1SvImJ_P0045262 Ttc3 protein_coding protein_coding MGP_129S1SvImJ_T0045263.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607859 95643505 + MGP_129S1SvImJ_P0045263 Ttc3 protein_coding protein_coding MGP_129S1SvImJ_T0045264.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607859 95651003 + MGP_129S1SvImJ_P0045264 Ttc3 protein_coding protein_coding MGP_129S1SvImJ_T0045265.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607860 95652271 + Ttc3 protein_coding processed_transcript MGP_129S1SvImJ_T0045266.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607860 95634920 + MGP_129S1SvImJ_P0045266 Ttc3 protein_coding protein_coding MGP_129S1SvImJ_T0045267.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95607885 95660417 + MGP_129S1SvImJ_P0045267 Ttc3 protein_coding protein_coding MGP_129S1SvImJ_T0045268.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95665283 95673209 + MGP_129S1SvImJ_P0045268 Ttc3 protein_coding protein_coding MGP_129S1SvImJ_T0045269.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95681658 95690300 + Ttc3 protein_coding retained_intron MGP_129S1SvImJ_T0045270.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95692682 95701646 + MGP_129S1SvImJ_P0045270 Ttc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045271.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95698964 95710322 + Ttc3 protein_coding retained_intron MGP_129S1SvImJ_T0045272.1 MGP_129S1SvImJ_G0023071.1 mouse_genomes_project 16 95708955 95710545 + Ttc3 protein_coding retained_intron MGP_129S1SvImJ_T0044762.1 MGP_129S1SvImJ_G0022906.1 mouse_genomes_project 16 57898605 57899895 - MGP_129S1SvImJ_P0044762 Gpr15 protein_coding protein_coding MGP_129S1SvImJ_T0017560.1 MGP_129S1SvImJ_G0015332.1 mouse_genomes_project 16 94488060 94503509 - 1810053B23Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017561.1 MGP_129S1SvImJ_G0015332.1 mouse_genomes_project 16 94488505 94497988 - 1810053B23Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017562.1 MGP_129S1SvImJ_G0015332.1 mouse_genomes_project 16 94489060 94498860 - 1810053B23Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017563.1 MGP_129S1SvImJ_G0015332.1 mouse_genomes_project 16 94489528 94498870 - 1810053B23Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017564.1 MGP_129S1SvImJ_G0015332.1 mouse_genomes_project 16 94490843 94504340 - 1810053B23Rik processed_transcript retained_intron MGP_129S1SvImJ_T0017565.1 MGP_129S1SvImJ_G0015332.1 mouse_genomes_project 16 94491582 94504308 - 1810053B23Rik processed_transcript retained_intron MGP_129S1SvImJ_T0000041.1 MGP_129S1SvImJ_G0000034.1 mouse_genomes_project 16 16339340 16339378 - MGP_129S1SvImJ_P0000041 Iglj3 IG_J_gene IG_J_gene MGP_129S1SvImJ_T0017555.1 MGP_129S1SvImJ_G0015327.1 mouse_genomes_project 16 92026234 92038249 + 4931406G06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0043628.1 MGP_129S1SvImJ_G0022616.1 mouse_genomes_project 16 15864400 15874342 - MGP_129S1SvImJ_P0043628 Sept5 protein_coding protein_coding MGP_129S1SvImJ_T0044901.1 MGP_129S1SvImJ_G0022962.1 mouse_genomes_project 16 78519360 78537765 - MGP_129S1SvImJ_P0044901 protein_coding protein_coding MGP_129S1SvImJ_T0044204.1 MGP_129S1SvImJ_G0022761.1 mouse_genomes_project 16 32218566 32339218 - MGP_129S1SvImJ_P0044204 protein_coding protein_coding MGP_129S1SvImJ_T0044205.1 MGP_129S1SvImJ_G0022761.1 mouse_genomes_project 16 32219471 32223035 - protein_coding retained_intron MGP_129S1SvImJ_T0044206.1 MGP_129S1SvImJ_G0022761.1 mouse_genomes_project 16 32219803 32724911 - MGP_129S1SvImJ_P0044206 protein_coding protein_coding MGP_129S1SvImJ_T0044207.1 MGP_129S1SvImJ_G0022761.1 mouse_genomes_project 16 32255277 32339111 - MGP_129S1SvImJ_P0044207 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0044208.1 MGP_129S1SvImJ_G0022761.1 mouse_genomes_project 16 32256505 32412162 - MGP_129S1SvImJ_P0044208 protein_coding protein_coding MGP_129S1SvImJ_T0044209.1 MGP_129S1SvImJ_G0022761.1 mouse_genomes_project 16 32256510 32661612 - MGP_129S1SvImJ_P0044209 protein_coding protein_coding MGP_129S1SvImJ_T0044210.1 MGP_129S1SvImJ_G0022761.1 mouse_genomes_project 16 32256510 32340321 - MGP_129S1SvImJ_P0044210 protein_coding protein_coding MGP_129S1SvImJ_T0044211.1 MGP_129S1SvImJ_G0022761.1 mouse_genomes_project 16 32256519 32339259 - MGP_129S1SvImJ_P0044211 protein_coding protein_coding MGP_129S1SvImJ_T0044212.1 MGP_129S1SvImJ_G0022761.1 mouse_genomes_project 16 32288828 32854571 - MGP_129S1SvImJ_P0044212 protein_coding protein_coding MGP_129S1SvImJ_T0044213.1 MGP_129S1SvImJ_G0022761.1 mouse_genomes_project 16 32400958 32791921 - MGP_129S1SvImJ_P0044213 protein_coding protein_coding MGP_129S1SvImJ_T0044214.1 MGP_129S1SvImJ_G0022761.1 mouse_genomes_project 16 32400959 32522302 - MGP_129S1SvImJ_P0044214 protein_coding protein_coding MGP_129S1SvImJ_T0044215.1 MGP_129S1SvImJ_G0022761.1 mouse_genomes_project 16 32400969 32791959 - MGP_129S1SvImJ_P0044215 protein_coding protein_coding MGP_129S1SvImJ_T0044216.1 MGP_129S1SvImJ_G0022761.1 mouse_genomes_project 16 32401029 32522067 - MGP_129S1SvImJ_P0044216 protein_coding protein_coding MGP_129S1SvImJ_T0044217.1 MGP_129S1SvImJ_G0022761.1 mouse_genomes_project 16 32402331 32522295 - MGP_129S1SvImJ_P0044217 protein_coding protein_coding MGP_129S1SvImJ_T0044218.1 MGP_129S1SvImJ_G0022761.1 mouse_genomes_project 16 32402398 32791817 - MGP_129S1SvImJ_P0044218 protein_coding protein_coding MGP_129S1SvImJ_T0044219.1 MGP_129S1SvImJ_G0022761.1 mouse_genomes_project 16 32426873 32521941 - MGP_129S1SvImJ_P0044219 protein_coding protein_coding MGP_129S1SvImJ_T0044220.1 MGP_129S1SvImJ_G0022761.1 mouse_genomes_project 16 32477897 32522012 - protein_coding retained_intron MGP_129S1SvImJ_T0044221.1 MGP_129S1SvImJ_G0022761.1 mouse_genomes_project 16 32503221 32511417 - protein_coding processed_transcript MGP_129S1SvImJ_T0044222.1 MGP_129S1SvImJ_G0022761.1 mouse_genomes_project 16 32623017 32628503 - protein_coding processed_transcript MGP_129S1SvImJ_T0044223.1 MGP_129S1SvImJ_G0022761.1 mouse_genomes_project 16 32790647 32791988 - protein_coding processed_transcript MGP_129S1SvImJ_T0013142.1 MGP_129S1SvImJ_G0011231.1 mouse_genomes_project 16 6799160 6799367 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006865.1 MGP_129S1SvImJ_G0005665.1 mouse_genomes_project 16 48679996 48684338 + Gm16619 lincRNA lincRNA MGP_129S1SvImJ_T0043861.1 MGP_129S1SvImJ_G0022675.1 mouse_genomes_project 16 20448609 20466660 + MGP_129S1SvImJ_P0043861 Fetub protein_coding protein_coding MGP_129S1SvImJ_T0043862.1 MGP_129S1SvImJ_G0022675.1 mouse_genomes_project 16 20450448 20466660 + MGP_129S1SvImJ_P0043862 Fetub protein_coding protein_coding MGP_129S1SvImJ_T0043863.1 MGP_129S1SvImJ_G0022675.1 mouse_genomes_project 16 20450491 20466654 + MGP_129S1SvImJ_P0043863 Fetub protein_coding protein_coding MGP_129S1SvImJ_T0043864.1 MGP_129S1SvImJ_G0022675.1 mouse_genomes_project 16 20453073 20466651 + MGP_129S1SvImJ_P0043864 Fetub protein_coding protein_coding MGP_129S1SvImJ_T0044608.1 MGP_129S1SvImJ_G0022862.1 mouse_genomes_project 16 45195308 45313567 - MGP_129S1SvImJ_P0044608 Nectin3 protein_coding protein_coding MGP_129S1SvImJ_T0044609.1 MGP_129S1SvImJ_G0022862.1 mouse_genomes_project 16 45202471 45221676 - MGP_129S1SvImJ_P0044609 Nectin3 protein_coding protein_coding MGP_129S1SvImJ_T0044610.1 MGP_129S1SvImJ_G0022862.1 mouse_genomes_project 16 45202518 45221732 - MGP_129S1SvImJ_P0044610 Nectin3 protein_coding protein_coding MGP_129S1SvImJ_T0044611.1 MGP_129S1SvImJ_G0022862.1 mouse_genomes_project 16 45202602 45263005 - MGP_129S1SvImJ_P0044611 Nectin3 protein_coding protein_coding MGP_129S1SvImJ_T0044612.1 MGP_129S1SvImJ_G0022862.1 mouse_genomes_project 16 45203056 45250787 - MGP_129S1SvImJ_P0044612 Nectin3 protein_coding protein_coding MGP_129S1SvImJ_T0044613.1 MGP_129S1SvImJ_G0022862.1 mouse_genomes_project 16 45248710 45313452 - MGP_129S1SvImJ_P0044613 Nectin3 protein_coding protein_coding MGP_129S1SvImJ_T0044614.1 MGP_129S1SvImJ_G0022862.1 mouse_genomes_project 16 45249122 45251365 - Nectin3 protein_coding retained_intron MGP_129S1SvImJ_T0044615.1 MGP_129S1SvImJ_G0022862.1 mouse_genomes_project 16 45261663 45313567 - MGP_129S1SvImJ_P0044615 Nectin3 protein_coding protein_coding MGP_129S1SvImJ_T0044616.1 MGP_129S1SvImJ_G0022862.1 mouse_genomes_project 16 45269763 45313372 - MGP_129S1SvImJ_P0044616 Nectin3 protein_coding protein_coding MGP_129S1SvImJ_T0044617.1 MGP_129S1SvImJ_G0022862.1 mouse_genomes_project 16 45274969 45315132 - Nectin3 protein_coding processed_transcript MGP_129S1SvImJ_T0010180.1 MGP_129S1SvImJ_G0008296.1 mouse_genomes_project 16 92996334 92996513 - miRNA miRNA MGP_129S1SvImJ_T0011429.1 MGP_129S1SvImJ_G0009545.1 mouse_genomes_project 16 34912074 34912392 - Gm25902 misc_RNA misc_RNA MGP_129S1SvImJ_T0043303.1 MGP_129S1SvImJ_G0022556.1 mouse_genomes_project 16 13408846 13415714 + MGP_129S1SvImJ_P0043303 Yars2 protein_coding protein_coding MGP_129S1SvImJ_T0043304.1 MGP_129S1SvImJ_G0022556.1 mouse_genomes_project 16 13408855 13414295 + Yars2 protein_coding retained_intron MGP_129S1SvImJ_T0043305.1 MGP_129S1SvImJ_G0022556.1 mouse_genomes_project 16 13408859 13416412 + MGP_129S1SvImJ_P0043305 Yars2 protein_coding protein_coding MGP_129S1SvImJ_T0043306.1 MGP_129S1SvImJ_G0022556.1 mouse_genomes_project 16 13408862 13416404 + MGP_129S1SvImJ_P0043306 Yars2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043307.1 MGP_129S1SvImJ_G0022556.1 mouse_genomes_project 16 13409434 13414013 + Yars2 protein_coding processed_transcript MGP_129S1SvImJ_T0043308.1 MGP_129S1SvImJ_G0022556.1 mouse_genomes_project 16 13410481 13414152 + MGP_129S1SvImJ_P0043308 Yars2 protein_coding protein_coding MGP_129S1SvImJ_T0044497.1 MGP_129S1SvImJ_G0022836.1 mouse_genomes_project 16 42910601 42955291 + MGP_129S1SvImJ_P0044497 protein_coding protein_coding MGP_129S1SvImJ_T0044498.1 MGP_129S1SvImJ_G0022836.1 mouse_genomes_project 16 42937575 42969668 + MGP_129S1SvImJ_P0044498 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0017526.1 MGP_129S1SvImJ_G0015318.1 mouse_genomes_project 16 31121901 31275100 - Gm17106 processed_transcript processed_transcript MGP_129S1SvImJ_T0044738.1 MGP_129S1SvImJ_G0022901.1 mouse_genomes_project 16 57575013 57635280 + MGP_129S1SvImJ_P0044738 Dcbld2 protein_coding protein_coding MGP_129S1SvImJ_T0044739.1 MGP_129S1SvImJ_G0022901.1 mouse_genomes_project 16 57620833 57630931 + Dcbld2 protein_coding processed_transcript MGP_129S1SvImJ_T0044740.1 MGP_129S1SvImJ_G0022901.1 mouse_genomes_project 16 57621488 57622189 + Dcbld2 protein_coding processed_transcript MGP_129S1SvImJ_T0044741.1 MGP_129S1SvImJ_G0022901.1 mouse_genomes_project 16 57622019 57629374 + Dcbld2 protein_coding retained_intron MGP_129S1SvImJ_T0044742.1 MGP_129S1SvImJ_G0022901.1 mouse_genomes_project 16 57625817 57631380 + Dcbld2 protein_coding processed_transcript MGP_129S1SvImJ_T0044743.1 MGP_129S1SvImJ_G0022901.1 mouse_genomes_project 16 57625861 57632277 + Dcbld2 protein_coding retained_intron MGP_129S1SvImJ_T0044744.1 MGP_129S1SvImJ_G0022901.1 mouse_genomes_project 16 57625863 57632340 + Dcbld2 protein_coding retained_intron MGP_129S1SvImJ_T0044251.1 MGP_129S1SvImJ_G0022773.1 mouse_genomes_project 16 34278394 34291844 - MGP_129S1SvImJ_P0044251 Dtx3l protein_coding protein_coding MGP_129S1SvImJ_T0044252.1 MGP_129S1SvImJ_G0022773.1 mouse_genomes_project 16 34284558 34291844 - MGP_129S1SvImJ_P0044252 Dtx3l protein_coding protein_coding MGP_129S1SvImJ_T0044810.1 MGP_129S1SvImJ_G0022931.1 mouse_genomes_project 16 58770472 58806111 - Crybg3 protein_coding retained_intron MGP_129S1SvImJ_T0044811.1 MGP_129S1SvImJ_G0022931.1 mouse_genomes_project 16 58771785 58837750 - MGP_129S1SvImJ_P0044811 Crybg3 protein_coding protein_coding MGP_129S1SvImJ_T0044812.1 MGP_129S1SvImJ_G0022931.1 mouse_genomes_project 16 58806967 58820200 - Crybg3 protein_coding processed_transcript MGP_129S1SvImJ_T0044813.1 MGP_129S1SvImJ_G0022931.1 mouse_genomes_project 16 58824391 58835968 - MGP_129S1SvImJ_P0044813 Crybg3 protein_coding protein_coding MGP_129S1SvImJ_T0042942.1 MGP_129S1SvImJ_G0022460.1 mouse_genomes_project 16 498088 538388 - MGP_129S1SvImJ_P0042942 Trap1 protein_coding protein_coding MGP_129S1SvImJ_T0042943.1 MGP_129S1SvImJ_G0022460.1 mouse_genomes_project 16 498257 502816 - Trap1 protein_coding processed_transcript MGP_129S1SvImJ_T0042944.1 MGP_129S1SvImJ_G0022460.1 mouse_genomes_project 16 515935 538336 - MGP_129S1SvImJ_P0042944 Trap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042945.1 MGP_129S1SvImJ_G0022460.1 mouse_genomes_project 16 524885 538388 - Trap1 protein_coding retained_intron MGP_129S1SvImJ_T0044430.1 MGP_129S1SvImJ_G0022822.1 mouse_genomes_project 16 37314719 37342598 - MGP_129S1SvImJ_P0044430 Upk1b protein_coding protein_coding MGP_129S1SvImJ_T0043296.1 MGP_129S1SvImJ_G0022553.1 mouse_genomes_project 16 12940324 12957993 - MGP_129S1SvImJ_P0043296 Mzt2 protein_coding protein_coding MGP_129S1SvImJ_T0043297.1 MGP_129S1SvImJ_G0022553.1 mouse_genomes_project 16 12940326 12957368 - Mzt2 protein_coding retained_intron MGP_129S1SvImJ_T0043298.1 MGP_129S1SvImJ_G0022553.1 mouse_genomes_project 16 12940333 12958015 - MGP_129S1SvImJ_P0043298 Mzt2 protein_coding protein_coding MGP_129S1SvImJ_T0044226.1 MGP_129S1SvImJ_G0022763.1 mouse_genomes_project 16 32977612 33012159 + MGP_129S1SvImJ_P0044226 Ccdc14 protein_coding protein_coding MGP_129S1SvImJ_T0099534.1 MGP_129S1SvImJ_G0037601.1 mouse_genomes_project 16 81018252 81018351 + Gm24773 snRNA snRNA MGP_129S1SvImJ_T0044043.1 MGP_129S1SvImJ_G0022723.1 mouse_genomes_project 16 29932599 29949035 + MGP_129S1SvImJ_P0044043 Pigz protein_coding protein_coding MGP_129S1SvImJ_T0044044.1 MGP_129S1SvImJ_G0022723.1 mouse_genomes_project 16 29932691 29947337 + Pigz protein_coding processed_transcript MGP_129S1SvImJ_T0044045.1 MGP_129S1SvImJ_G0022723.1 mouse_genomes_project 16 29932730 29945612 + Pigz protein_coding processed_transcript MGP_129S1SvImJ_T0044046.1 MGP_129S1SvImJ_G0022723.1 mouse_genomes_project 16 29944982 29945608 + Pigz protein_coding processed_transcript MGP_129S1SvImJ_T0006866.1 MGP_129S1SvImJ_G0005666.1 mouse_genomes_project 16 49446539 49477764 + G730013B05Rik lincRNA lincRNA MGP_129S1SvImJ_T0044726.1 MGP_129S1SvImJ_G0022894.1 mouse_genomes_project 16 56267610 56304244 + MGP_129S1SvImJ_P0044726 Tomm70a protein_coding protein_coding MGP_129S1SvImJ_T0013202.1 MGP_129S1SvImJ_G0011291.1 mouse_genomes_project 16 48304785 48305166 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0044770.1 MGP_129S1SvImJ_G0022909.1 mouse_genomes_project 16 57982404 57983491 - MGP_129S1SvImJ_P0044770 protein_coding protein_coding MGP_129S1SvImJ_T0099494.1 MGP_129S1SvImJ_G0037561.1 mouse_genomes_project 16 8022965 8023128 - Gm24145 snRNA snRNA MGP_129S1SvImJ_T0099541.1 MGP_129S1SvImJ_G0037608.1 mouse_genomes_project 16 96157917 96158081 + Gm22634 snRNA snRNA MGP_129S1SvImJ_T0013135.1 MGP_129S1SvImJ_G0011224.1 mouse_genomes_project 16 794677 795002 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000991.1 MGP_129S1SvImJ_G0000921.1 mouse_genomes_project 16 77534802 77537372 - TEC TEC MGP_129S1SvImJ_T0043189.1 MGP_129S1SvImJ_G0022524.1 mouse_genomes_project 16 8193873 8200078 + MGP_129S1SvImJ_P0043189 Tnfrsf17 protein_coding protein_coding MGP_129S1SvImJ_T0045039.1 MGP_129S1SvImJ_G0023027.1 mouse_genomes_project 16 91676661 91689301 - Mis18a protein_coding retained_intron MGP_129S1SvImJ_T0045040.1 MGP_129S1SvImJ_G0023027.1 mouse_genomes_project 16 91676661 91689301 - MGP_129S1SvImJ_P0045040 Mis18a protein_coding protein_coding MGP_129S1SvImJ_T0045041.1 MGP_129S1SvImJ_G0023027.1 mouse_genomes_project 16 91676663 91689169 - MGP_129S1SvImJ_P0045041 Mis18a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0045042.1 MGP_129S1SvImJ_G0023027.1 mouse_genomes_project 16 91678803 91689036 - Mis18a protein_coding retained_intron MGP_129S1SvImJ_T0011428.1 MGP_129S1SvImJ_G0009544.1 mouse_genomes_project 16 21006423 21006737 - Gm23430 misc_RNA misc_RNA MGP_129S1SvImJ_T0003719.1 MGP_129S1SvImJ_G0003361.1 mouse_genomes_project 16 97443964 97444569 + antisense antisense MGP_129S1SvImJ_T0013219.1 MGP_129S1SvImJ_G0011308.1 mouse_genomes_project 16 80152608 80153038 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0044091.1 MGP_129S1SvImJ_G0022736.1 mouse_genomes_project 16 30397715 30460868 + MGP_129S1SvImJ_P0044091 Ubxn7 protein_coding protein_coding MGP_129S1SvImJ_T0044802.1 MGP_129S1SvImJ_G0022928.1 mouse_genomes_project 16 58634717 58641038 - MGP_129S1SvImJ_P0044802 Olfr209 protein_coding protein_coding MGP_129S1SvImJ_T0043375.1 MGP_129S1SvImJ_G0022568.1 mouse_genomes_project 16 14201718 14235434 - MGP_129S1SvImJ_P0043375 Ppil2 protein_coding protein_coding MGP_129S1SvImJ_T0043376.1 MGP_129S1SvImJ_G0022568.1 mouse_genomes_project 16 14201718 14235439 - MGP_129S1SvImJ_P0043376 Ppil2 protein_coding protein_coding MGP_129S1SvImJ_T0043377.1 MGP_129S1SvImJ_G0022568.1 mouse_genomes_project 16 14202479 14235424 - MGP_129S1SvImJ_P0043377 Ppil2 protein_coding protein_coding MGP_129S1SvImJ_T0043378.1 MGP_129S1SvImJ_G0022568.1 mouse_genomes_project 16 14203769 14204623 - Ppil2 protein_coding retained_intron MGP_129S1SvImJ_T0043379.1 MGP_129S1SvImJ_G0022568.1 mouse_genomes_project 16 14205265 14206681 - Ppil2 protein_coding retained_intron MGP_129S1SvImJ_T0043380.1 MGP_129S1SvImJ_G0022568.1 mouse_genomes_project 16 14208010 14218791 - Ppil2 protein_coding retained_intron MGP_129S1SvImJ_T0043381.1 MGP_129S1SvImJ_G0022568.1 mouse_genomes_project 16 14210084 14212308 - Ppil2 protein_coding retained_intron MGP_129S1SvImJ_T0043382.1 MGP_129S1SvImJ_G0022568.1 mouse_genomes_project 16 14210924 14235397 - MGP_129S1SvImJ_P0043382 Ppil2 protein_coding protein_coding MGP_129S1SvImJ_T0043383.1 MGP_129S1SvImJ_G0022568.1 mouse_genomes_project 16 14211867 14235418 - Ppil2 protein_coding processed_transcript MGP_129S1SvImJ_T0043384.1 MGP_129S1SvImJ_G0022568.1 mouse_genomes_project 16 14212172 14235395 - Ppil2 protein_coding retained_intron MGP_129S1SvImJ_T0043385.1 MGP_129S1SvImJ_G0022568.1 mouse_genomes_project 16 14229907 14235418 - Ppil2 protein_coding processed_transcript MGP_129S1SvImJ_T0043386.1 MGP_129S1SvImJ_G0022568.1 mouse_genomes_project 16 14233031 14235414 - Ppil2 protein_coding retained_intron MGP_129S1SvImJ_T0006871.1 MGP_129S1SvImJ_G0005668.1 mouse_genomes_project 16 49717810 49718493 + 1700116B05Rik lincRNA lincRNA MGP_129S1SvImJ_T0006872.1 MGP_129S1SvImJ_G0005668.1 mouse_genomes_project 16 49717879 49718467 + 1700116B05Rik lincRNA lincRNA MGP_129S1SvImJ_T0100805.1 MGP_129S1SvImJ_G0038872.1 mouse_genomes_project 16 76185502 76185633 - Gm22268 snoRNA snoRNA MGP_129S1SvImJ_T0011433.1 MGP_129S1SvImJ_G0009549.1 mouse_genomes_project 16 46626224 46626456 + Gm25339 misc_RNA misc_RNA MGP_129S1SvImJ_T0003682.1 MGP_129S1SvImJ_G0003332.1 mouse_genomes_project 16 16323668 16380607 + antisense antisense MGP_129S1SvImJ_T0000978.1 MGP_129S1SvImJ_G0000909.1 mouse_genomes_project 16 16522677 16523987 + TEC TEC MGP_129S1SvImJ_T0042972.1 MGP_129S1SvImJ_G0022467.1 mouse_genomes_project 16 1127425 1184436 - MGP_129S1SvImJ_P0042972 Coro7 protein_coding protein_coding MGP_129S1SvImJ_T0042973.1 MGP_129S1SvImJ_G0022467.1 mouse_genomes_project 16 1128669 1130164 - Coro7 protein_coding processed_transcript MGP_129S1SvImJ_T0042974.1 MGP_129S1SvImJ_G0022467.1 mouse_genomes_project 16 1130044 1130959 - Coro7 protein_coding retained_intron MGP_129S1SvImJ_T0042975.1 MGP_129S1SvImJ_G0022467.1 mouse_genomes_project 16 1130351 1184337 - MGP_129S1SvImJ_P0042975 Coro7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042976.1 MGP_129S1SvImJ_G0022467.1 mouse_genomes_project 16 1133170 1135152 - Coro7 protein_coding retained_intron MGP_129S1SvImJ_T0042977.1 MGP_129S1SvImJ_G0022467.1 mouse_genomes_project 16 1133538 1136328 - Coro7 protein_coding retained_intron MGP_129S1SvImJ_T0042978.1 MGP_129S1SvImJ_G0022467.1 mouse_genomes_project 16 1134569 1149389 - Coro7 protein_coding processed_transcript MGP_129S1SvImJ_T0042979.1 MGP_129S1SvImJ_G0022467.1 mouse_genomes_project 16 1134616 1136334 - Coro7 protein_coding retained_intron MGP_129S1SvImJ_T0042980.1 MGP_129S1SvImJ_G0022467.1 mouse_genomes_project 16 1135890 1164867 - Coro7 protein_coding retained_intron MGP_129S1SvImJ_T0042984.1 MGP_129S1SvImJ_G0022467.1 mouse_genomes_project 16 1155238 1184436 - MGP_129S1SvImJ_P0042984 Coro7 protein_coding protein_coding MGP_129S1SvImJ_T0042985.1 MGP_129S1SvImJ_G0022467.1 mouse_genomes_project 16 1163256 1184372 - Coro7 protein_coding retained_intron MGP_129S1SvImJ_T0042986.1 MGP_129S1SvImJ_G0022467.1 mouse_genomes_project 16 1180178 1184401 - Coro7 protein_coding retained_intron MGP_129S1SvImJ_T0003705.1 MGP_129S1SvImJ_G0003351.1 mouse_genomes_project 16 44740956 44743913 + Gm15640 antisense antisense MGP_129S1SvImJ_T0045273.1 MGP_129S1SvImJ_G0023072.1 mouse_genomes_project 16 95739074 95768582 - MGP_129S1SvImJ_P0045273 Dscr3 protein_coding protein_coding MGP_129S1SvImJ_T0045274.1 MGP_129S1SvImJ_G0023072.1 mouse_genomes_project 16 95744212 95752920 - Dscr3 protein_coding processed_transcript MGP_129S1SvImJ_T0045275.1 MGP_129S1SvImJ_G0023072.1 mouse_genomes_project 16 95746292 95768184 - Dscr3 protein_coding retained_intron MGP_129S1SvImJ_T0045276.1 MGP_129S1SvImJ_G0023072.1 mouse_genomes_project 16 95752192 95768193 - Dscr3 protein_coding retained_intron MGP_129S1SvImJ_T0045277.1 MGP_129S1SvImJ_G0023072.1 mouse_genomes_project 16 95753886 95768169 - Dscr3 protein_coding retained_intron MGP_129S1SvImJ_T0013166.1 MGP_129S1SvImJ_G0011255.1 mouse_genomes_project 16 16994825 16995492 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006886.1 MGP_129S1SvImJ_G0005678.1 mouse_genomes_project 16 91497276 91497996 + 1110008E08Rik lincRNA lincRNA MGP_129S1SvImJ_T0006887.1 MGP_129S1SvImJ_G0005678.1 mouse_genomes_project 16 91497276 91497998 + 1110008E08Rik lincRNA lincRNA MGP_129S1SvImJ_T0100781.1 MGP_129S1SvImJ_G0038848.1 mouse_genomes_project 16 30089538 30089671 + Gm26419 snoRNA snoRNA MGP_129S1SvImJ_T0043789.1 MGP_129S1SvImJ_G0022653.1 mouse_genomes_project 16 18052901 18066054 - MGP_129S1SvImJ_P0043789 Clcn2 protein_coding protein_coding MGP_129S1SvImJ_T0043790.1 MGP_129S1SvImJ_G0022653.1 mouse_genomes_project 16 18052925 18066051 - Clcn2 protein_coding retained_intron MGP_129S1SvImJ_T0043791.1 MGP_129S1SvImJ_G0022653.1 mouse_genomes_project 16 18052935 18066101 - Clcn2 protein_coding retained_intron MGP_129S1SvImJ_T0043792.1 MGP_129S1SvImJ_G0022653.1 mouse_genomes_project 16 18053160 18066048 - MGP_129S1SvImJ_P0043792 Clcn2 protein_coding protein_coding MGP_129S1SvImJ_T0043793.1 MGP_129S1SvImJ_G0022653.1 mouse_genomes_project 16 18055475 18067687 - MGP_129S1SvImJ_P0043793 Clcn2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043794.1 MGP_129S1SvImJ_G0022653.1 mouse_genomes_project 16 18057111 18059063 - Clcn2 protein_coding retained_intron MGP_129S1SvImJ_T0043795.1 MGP_129S1SvImJ_G0022653.1 mouse_genomes_project 16 18057643 18058672 - Clcn2 protein_coding retained_intron MGP_129S1SvImJ_T0043796.1 MGP_129S1SvImJ_G0022653.1 mouse_genomes_project 16 18060027 18061902 - Clcn2 protein_coding retained_intron MGP_129S1SvImJ_T0043797.1 MGP_129S1SvImJ_G0022653.1 mouse_genomes_project 16 18062247 18063605 - Clcn2 protein_coding retained_intron MGP_129S1SvImJ_T0010135.1 MGP_129S1SvImJ_G0008251.1 mouse_genomes_project 16 15371389 15371471 - Mir6366 miRNA miRNA MGP_129S1SvImJ_T0043556.1 MGP_129S1SvImJ_G0022606.1 mouse_genomes_project 16 15455942 15460766 + Trmt2a protein_coding retained_intron MGP_129S1SvImJ_T0043557.1 MGP_129S1SvImJ_G0022606.1 mouse_genomes_project 16 15456146 15460766 + MGP_129S1SvImJ_P0043557 Trmt2a protein_coding protein_coding MGP_129S1SvImJ_T0043558.1 MGP_129S1SvImJ_G0022606.1 mouse_genomes_project 16 15456146 15462036 + MGP_129S1SvImJ_P0043558 Trmt2a protein_coding protein_coding MGP_129S1SvImJ_T0043559.1 MGP_129S1SvImJ_G0022606.1 mouse_genomes_project 16 15456265 15460766 + Trmt2a protein_coding retained_intron MGP_129S1SvImJ_T0043560.1 MGP_129S1SvImJ_G0022606.1 mouse_genomes_project 16 15456272 15460772 + Trmt2a protein_coding retained_intron MGP_129S1SvImJ_T0043561.1 MGP_129S1SvImJ_G0022606.1 mouse_genomes_project 16 15456272 15460762 + Trmt2a protein_coding retained_intron MGP_129S1SvImJ_T0043562.1 MGP_129S1SvImJ_G0022606.1 mouse_genomes_project 16 15456325 15460766 + MGP_129S1SvImJ_P0043562 Trmt2a protein_coding protein_coding MGP_129S1SvImJ_T0043563.1 MGP_129S1SvImJ_G0022606.1 mouse_genomes_project 16 15457284 15460376 + MGP_129S1SvImJ_P0043563 Trmt2a protein_coding protein_coding MGP_129S1SvImJ_T0043564.1 MGP_129S1SvImJ_G0022606.1 mouse_genomes_project 16 15458685 15460765 + MGP_129S1SvImJ_P0043564 Trmt2a protein_coding protein_coding MGP_129S1SvImJ_T0043565.1 MGP_129S1SvImJ_G0022606.1 mouse_genomes_project 16 15459484 15460495 + Trmt2a protein_coding retained_intron MGP_129S1SvImJ_T0044499.1 MGP_129S1SvImJ_G0022837.1 mouse_genomes_project 16 42983949 43082543 - MGP_129S1SvImJ_P0044499 Sidt1 protein_coding protein_coding MGP_129S1SvImJ_T0044500.1 MGP_129S1SvImJ_G0022837.1 mouse_genomes_project 16 42985406 43082080 - MGP_129S1SvImJ_P0044500 Sidt1 protein_coding protein_coding MGP_129S1SvImJ_T0044501.1 MGP_129S1SvImJ_G0022837.1 mouse_genomes_project 16 43020226 43028905 - Sidt1 protein_coding retained_intron MGP_129S1SvImJ_T0044502.1 MGP_129S1SvImJ_G0022837.1 mouse_genomes_project 16 43028464 43029564 - MGP_129S1SvImJ_P0044502 Sidt1 protein_coding protein_coding MGP_129S1SvImJ_T0044503.1 MGP_129S1SvImJ_G0022837.1 mouse_genomes_project 16 43031315 43082093 - Sidt1 protein_coding processed_transcript MGP_129S1SvImJ_T0044015.1 MGP_129S1SvImJ_G0022719.1 mouse_genomes_project 16 29253495 29273673 - MGP_129S1SvImJ_P0044015 Apod protein_coding protein_coding MGP_129S1SvImJ_T0044016.1 MGP_129S1SvImJ_G0022719.1 mouse_genomes_project 16 29254351 29273669 - MGP_129S1SvImJ_P0044016 Apod protein_coding protein_coding MGP_129S1SvImJ_T0044017.1 MGP_129S1SvImJ_G0022719.1 mouse_genomes_project 16 29254385 29273459 - Apod protein_coding retained_intron MGP_129S1SvImJ_T0044018.1 MGP_129S1SvImJ_G0022719.1 mouse_genomes_project 16 29254647 29260690 - Apod protein_coding retained_intron MGP_129S1SvImJ_T0044019.1 MGP_129S1SvImJ_G0022719.1 mouse_genomes_project 16 29254740 29260923 - Apod protein_coding retained_intron MGP_129S1SvImJ_T0044020.1 MGP_129S1SvImJ_G0022719.1 mouse_genomes_project 16 29260749 29270213 - Apod protein_coding retained_intron MGP_129S1SvImJ_T0013217.1 MGP_129S1SvImJ_G0011306.1 mouse_genomes_project 16 76189182 76189930 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0043099.1 MGP_129S1SvImJ_G0022500.1 mouse_genomes_project 16 5516630 5549399 + MGP_129S1SvImJ_P0043099 1810013L24Rik protein_coding protein_coding MGP_129S1SvImJ_T0043949.1 MGP_129S1SvImJ_G0022703.1 mouse_genomes_project 16 27043884 27064701 + MGP_129S1SvImJ_P0043949 Hrasls protein_coding protein_coding MGP_129S1SvImJ_T0043950.1 MGP_129S1SvImJ_G0022703.1 mouse_genomes_project 16 27044297 27062552 + MGP_129S1SvImJ_P0043950 Hrasls protein_coding protein_coding MGP_129S1SvImJ_T0043951.1 MGP_129S1SvImJ_G0022703.1 mouse_genomes_project 16 27044319 27062398 + Hrasls protein_coding processed_transcript MGP_129S1SvImJ_T0043952.1 MGP_129S1SvImJ_G0022703.1 mouse_genomes_project 16 27044359 27054505 + MGP_129S1SvImJ_P0043952 Hrasls protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044621.1 MGP_129S1SvImJ_G0022865.1 mouse_genomes_project 16 47308685 47512545 + MGP_129S1SvImJ_P0044621 Morc1 protein_coding protein_coding MGP_129S1SvImJ_T0100771.1 MGP_129S1SvImJ_G0038838.1 mouse_genomes_project 16 16687559 16687691 + Gm25762 snoRNA snoRNA MGP_129S1SvImJ_T0099508.1 MGP_129S1SvImJ_G0037575.1 mouse_genomes_project 16 33695298 33695451 - Gm23518 snRNA snRNA MGP_129S1SvImJ_T0043436.1 MGP_129S1SvImJ_G0022581.1 mouse_genomes_project 16 14642919 14660979 + MGP_129S1SvImJ_P0043436 Aifm3 protein_coding protein_coding MGP_129S1SvImJ_T0043437.1 MGP_129S1SvImJ_G0022581.1 mouse_genomes_project 16 14642971 14660979 + MGP_129S1SvImJ_P0043437 Aifm3 protein_coding protein_coding MGP_129S1SvImJ_T0043438.1 MGP_129S1SvImJ_G0022581.1 mouse_genomes_project 16 14643155 14658900 + Aifm3 protein_coding retained_intron MGP_129S1SvImJ_T0043439.1 MGP_129S1SvImJ_G0022581.1 mouse_genomes_project 16 14652938 14660975 + Aifm3 protein_coding retained_intron MGP_129S1SvImJ_T0043440.1 MGP_129S1SvImJ_G0022581.1 mouse_genomes_project 16 14655735 14657196 + Aifm3 protein_coding retained_intron MGP_129S1SvImJ_T0043441.1 MGP_129S1SvImJ_G0022581.1 mouse_genomes_project 16 14656385 14659418 + Aifm3 protein_coding retained_intron MGP_129S1SvImJ_T0099500.1 MGP_129S1SvImJ_G0037567.1 mouse_genomes_project 16 18095116 18095281 + Gm22741 snRNA snRNA MGP_129S1SvImJ_T0043713.1 MGP_129S1SvImJ_G0022643.1 mouse_genomes_project 16 17855075 17869481 + MGP_129S1SvImJ_P0043713 Dvl3 protein_coding protein_coding MGP_129S1SvImJ_T0043714.1 MGP_129S1SvImJ_G0022643.1 mouse_genomes_project 16 17855157 17870351 + MGP_129S1SvImJ_P0043714 Dvl3 protein_coding protein_coding MGP_129S1SvImJ_T0043715.1 MGP_129S1SvImJ_G0022643.1 mouse_genomes_project 16 17855199 17869477 + MGP_129S1SvImJ_P0043715 Dvl3 protein_coding protein_coding MGP_129S1SvImJ_T0043716.1 MGP_129S1SvImJ_G0022643.1 mouse_genomes_project 16 17855279 17863165 + Dvl3 protein_coding retained_intron MGP_129S1SvImJ_T0010132.1 MGP_129S1SvImJ_G0008248.1 mouse_genomes_project 16 11208248 11208315 + Mir484 miRNA miRNA MGP_129S1SvImJ_T0045378.1 MGP_129S1SvImJ_G0023093.1 mouse_genomes_project 16 99196024 99218888 - MGP_129S1SvImJ_P0045378 Ripk4 protein_coding protein_coding MGP_129S1SvImJ_T0043583.1 MGP_129S1SvImJ_G0022609.1 mouse_genomes_project 16 15568178 15633068 + MGP_129S1SvImJ_P0043583 Arvcf protein_coding protein_coding MGP_129S1SvImJ_T0043584.1 MGP_129S1SvImJ_G0022609.1 mouse_genomes_project 16 15568270 15633064 + MGP_129S1SvImJ_P0043584 Arvcf protein_coding protein_coding MGP_129S1SvImJ_T0043585.1 MGP_129S1SvImJ_G0022609.1 mouse_genomes_project 16 15568270 15633068 + MGP_129S1SvImJ_P0043585 Arvcf protein_coding protein_coding MGP_129S1SvImJ_T0043586.1 MGP_129S1SvImJ_G0022609.1 mouse_genomes_project 16 15605841 15632739 + MGP_129S1SvImJ_P0043586 Arvcf protein_coding protein_coding MGP_129S1SvImJ_T0043587.1 MGP_129S1SvImJ_G0022609.1 mouse_genomes_project 16 15617696 15633068 + MGP_129S1SvImJ_P0043587 Arvcf protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043588.1 MGP_129S1SvImJ_G0022609.1 mouse_genomes_project 16 15617697 15632248 + MGP_129S1SvImJ_P0043588 Arvcf protein_coding protein_coding MGP_129S1SvImJ_T0043589.1 MGP_129S1SvImJ_G0022609.1 mouse_genomes_project 16 15622832 15624998 + Arvcf protein_coding processed_transcript MGP_129S1SvImJ_T0043590.1 MGP_129S1SvImJ_G0022609.1 mouse_genomes_project 16 15625081 15626632 + Arvcf protein_coding retained_intron MGP_129S1SvImJ_T0043591.1 MGP_129S1SvImJ_G0022609.1 mouse_genomes_project 16 15627123 15629423 + Arvcf protein_coding processed_transcript MGP_129S1SvImJ_T0043592.1 MGP_129S1SvImJ_G0022609.1 mouse_genomes_project 16 15629440 15630450 + Arvcf protein_coding retained_intron MGP_129S1SvImJ_T0045186.1 MGP_129S1SvImJ_G0023054.1 mouse_genomes_project 16 93382616 93395343 + MGP_129S1SvImJ_P0045186 Smim11 protein_coding protein_coding MGP_129S1SvImJ_T0045187.1 MGP_129S1SvImJ_G0023054.1 mouse_genomes_project 16 93382626 93393726 + MGP_129S1SvImJ_P0045187 Smim11 protein_coding protein_coding MGP_129S1SvImJ_T0043941.1 MGP_129S1SvImJ_G0022699.1 mouse_genomes_project 16 25120945 25143238 - MGP_129S1SvImJ_P0043941 Uts2b protein_coding protein_coding MGP_129S1SvImJ_T0045012.1 MGP_129S1SvImJ_G0023015.1 mouse_genomes_project 16 90013491 90013650 + MGP_129S1SvImJ_P0045012 Gm7735 protein_coding protein_coding MGP_129S1SvImJ_T0003685.1 MGP_129S1SvImJ_G0003335.1 mouse_genomes_project 16 29401704 29402120 - Gm15743 antisense antisense MGP_129S1SvImJ_T0003686.1 MGP_129S1SvImJ_G0003335.1 mouse_genomes_project 16 29401704 29403604 - Gm15743 antisense antisense MGP_129S1SvImJ_T0099538.1 MGP_129S1SvImJ_G0037605.1 mouse_genomes_project 16 92973539 92973646 - Gm25245 snRNA snRNA MGP_129S1SvImJ_T0098521.1 MGP_129S1SvImJ_G0036606.1 mouse_genomes_project 16 39856077 39856169 + Gm26381 rRNA rRNA MGP_129S1SvImJ_T0013180.1 MGP_129S1SvImJ_G0011269.1 mouse_genomes_project 16 29993930 29994213 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013205.1 MGP_129S1SvImJ_G0011294.1 mouse_genomes_project 16 55898546 55899183 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000993.1 MGP_129S1SvImJ_G0000923.1 mouse_genomes_project 16 77605824 77606347 + TEC TEC MGP_129S1SvImJ_T0045318.1 MGP_129S1SvImJ_G0023079.1 mouse_genomes_project 16 97341884 97436880 - MGP_129S1SvImJ_P0045318 Brwd1 protein_coding protein_coding MGP_129S1SvImJ_T0045319.1 MGP_129S1SvImJ_G0023079.1 mouse_genomes_project 16 97342241 97436899 - MGP_129S1SvImJ_P0045319 Brwd1 protein_coding protein_coding MGP_129S1SvImJ_T0045320.1 MGP_129S1SvImJ_G0023079.1 mouse_genomes_project 16 97349063 97436899 - MGP_129S1SvImJ_P0045320 Brwd1 protein_coding protein_coding MGP_129S1SvImJ_T0045321.1 MGP_129S1SvImJ_G0023079.1 mouse_genomes_project 16 97352224 97436899 - MGP_129S1SvImJ_P0045321 Brwd1 protein_coding protein_coding MGP_129S1SvImJ_T0045322.1 MGP_129S1SvImJ_G0023079.1 mouse_genomes_project 16 97355109 97398374 - MGP_129S1SvImJ_P0045322 Brwd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045323.1 MGP_129S1SvImJ_G0023079.1 mouse_genomes_project 16 97355913 97363017 - Brwd1 protein_coding retained_intron MGP_129S1SvImJ_T0045324.1 MGP_129S1SvImJ_G0023079.1 mouse_genomes_project 16 97362849 97378630 - MGP_129S1SvImJ_P0045324 Brwd1 protein_coding protein_coding MGP_129S1SvImJ_T0045325.1 MGP_129S1SvImJ_G0023079.1 mouse_genomes_project 16 97367271 97368969 - Brwd1 protein_coding retained_intron MGP_129S1SvImJ_T0045326.1 MGP_129S1SvImJ_G0023079.1 mouse_genomes_project 16 97370582 97371035 - Brwd1 protein_coding retained_intron MGP_129S1SvImJ_T0045327.1 MGP_129S1SvImJ_G0023079.1 mouse_genomes_project 16 97384268 97386854 - Brwd1 protein_coding retained_intron MGP_129S1SvImJ_T0045328.1 MGP_129S1SvImJ_G0023079.1 mouse_genomes_project 16 97387085 97412348 - MGP_129S1SvImJ_P0045328 Brwd1 protein_coding protein_coding MGP_129S1SvImJ_T0045329.1 MGP_129S1SvImJ_G0023079.1 mouse_genomes_project 16 97387209 97412313 - MGP_129S1SvImJ_P0045329 Brwd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045330.1 MGP_129S1SvImJ_G0023079.1 mouse_genomes_project 16 97397435 97398657 - Brwd1 protein_coding retained_intron MGP_129S1SvImJ_T0045331.1 MGP_129S1SvImJ_G0023079.1 mouse_genomes_project 16 97417973 97436978 - MGP_129S1SvImJ_P0045331 Brwd1 protein_coding protein_coding MGP_129S1SvImJ_T0043360.1 MGP_129S1SvImJ_G0022566.1 mouse_genomes_project 16 14085903 14154958 + MGP_129S1SvImJ_P0043360 Mapk1 protein_coding protein_coding MGP_129S1SvImJ_T0043361.1 MGP_129S1SvImJ_G0022566.1 mouse_genomes_project 16 14085903 14152254 + MGP_129S1SvImJ_P0043361 Mapk1 protein_coding protein_coding MGP_129S1SvImJ_T0043362.1 MGP_129S1SvImJ_G0022566.1 mouse_genomes_project 16 14086088 14146545 + MGP_129S1SvImJ_P0043362 Mapk1 protein_coding protein_coding MGP_129S1SvImJ_T0043363.1 MGP_129S1SvImJ_G0022566.1 mouse_genomes_project 16 14124211 14129854 + Mapk1 protein_coding retained_intron MGP_129S1SvImJ_T0043364.1 MGP_129S1SvImJ_G0022566.1 mouse_genomes_project 16 14131824 14132993 + Mapk1 protein_coding retained_intron MGP_129S1SvImJ_T0043365.1 MGP_129S1SvImJ_G0022566.1 mouse_genomes_project 16 14132164 14151368 + MGP_129S1SvImJ_P0043365 Mapk1 protein_coding protein_coding MGP_129S1SvImJ_T0043366.1 MGP_129S1SvImJ_G0022566.1 mouse_genomes_project 16 14142842 14146210 + Mapk1 protein_coding processed_transcript MGP_129S1SvImJ_T0043367.1 MGP_129S1SvImJ_G0022566.1 mouse_genomes_project 16 14143053 14151715 + Mapk1 protein_coding processed_transcript MGP_129S1SvImJ_T0044641.1 MGP_129S1SvImJ_G0022872.1 mouse_genomes_project 16 47936960 48080410 + MGP_129S1SvImJ_P0044641 Myh15 protein_coding protein_coding MGP_129S1SvImJ_T0099532.1 MGP_129S1SvImJ_G0037599.1 mouse_genomes_project 16 73358193 73358360 - Gm25699 snRNA snRNA MGP_129S1SvImJ_T0010181.1 MGP_129S1SvImJ_G0008297.1 mouse_genomes_project 16 94195873 94195941 + Gm28003 miRNA miRNA MGP_129S1SvImJ_T0099492.1 MGP_129S1SvImJ_G0037559.1 mouse_genomes_project 16 7015325 7015428 + Gm24392 snRNA snRNA MGP_129S1SvImJ_T0010133.1 MGP_129S1SvImJ_G0008249.1 mouse_genomes_project 16 14249057 14249139 - Mir130b miRNA miRNA MGP_129S1SvImJ_T0102277.1 MGP_129S1SvImJ_G0040111.1 mouse_genomes_project 16 58367297 58368056 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0013150.1 MGP_129S1SvImJ_G0011239.1 mouse_genomes_project 16 11064072 11064579 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017566.1 MGP_129S1SvImJ_G0015333.1 mouse_genomes_project 16 97387313 97389967 + Gm15342 processed_transcript processed_transcript MGP_129S1SvImJ_T0044248.1 MGP_129S1SvImJ_G0022772.1 mouse_genomes_project 16 34175683 34219104 - MGP_129S1SvImJ_P0044248 Parp14 protein_coding protein_coding MGP_129S1SvImJ_T0044249.1 MGP_129S1SvImJ_G0022772.1 mouse_genomes_project 16 34204904 34218949 - Parp14 protein_coding retained_intron MGP_129S1SvImJ_T0044250.1 MGP_129S1SvImJ_G0022772.1 mouse_genomes_project 16 34213492 34218949 - Parp14 protein_coding retained_intron MGP_129S1SvImJ_T0044792.1 MGP_129S1SvImJ_G0022919.1 mouse_genomes_project 16 58324265 58330921 - MGP_129S1SvImJ_P0044792 protein_coding protein_coding MGP_129S1SvImJ_T0044793.1 MGP_129S1SvImJ_G0022919.1 mouse_genomes_project 16 58324265 58325836 - MGP_129S1SvImJ_P0044793 protein_coding protein_coding MGP_129S1SvImJ_T0013171.1 MGP_129S1SvImJ_G0011260.1 mouse_genomes_project 16 19720016 19720411 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0043147.1 MGP_129S1SvImJ_G0022517.1 mouse_genomes_project 16 7665927 7674092 + MGP_129S1SvImJ_P0043147 Rmi2 protein_coding protein_coding MGP_129S1SvImJ_T0043148.1 MGP_129S1SvImJ_G0022517.1 mouse_genomes_project 16 7665936 7729155 + MGP_129S1SvImJ_P0043148 Rmi2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044936.1 MGP_129S1SvImJ_G0022972.1 mouse_genomes_project 16 86048464 86174958 - MGP_129S1SvImJ_P0044936 Cyyr1 protein_coding protein_coding MGP_129S1SvImJ_T0044937.1 MGP_129S1SvImJ_G0022972.1 mouse_genomes_project 16 86080513 86174958 - MGP_129S1SvImJ_P0044937 Cyyr1 protein_coding protein_coding MGP_129S1SvImJ_T0010175.1 MGP_129S1SvImJ_G0008291.1 mouse_genomes_project 16 77778265 77778336 + Mir125b-2 miRNA miRNA MGP_129S1SvImJ_T0013157.1 MGP_129S1SvImJ_G0011246.1 mouse_genomes_project 16 13940395 13940645 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100772.1 MGP_129S1SvImJ_G0038839.1 mouse_genomes_project 16 18030678 18030753 + Snord66 snoRNA snoRNA MGP_129S1SvImJ_T0013172.1 MGP_129S1SvImJ_G0011261.1 mouse_genomes_project 16 20747698 20748152 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0044071.1 MGP_129S1SvImJ_G0022730.1 mouse_genomes_project 16 30182962 30207922 - MGP_129S1SvImJ_P0044071 Nrros protein_coding protein_coding MGP_129S1SvImJ_T0044072.1 MGP_129S1SvImJ_G0022730.1 mouse_genomes_project 16 30182972 30207894 - MGP_129S1SvImJ_P0044072 Nrros protein_coding protein_coding MGP_129S1SvImJ_T0044073.1 MGP_129S1SvImJ_G0022730.1 mouse_genomes_project 16 30182972 30188057 - MGP_129S1SvImJ_P0044073 Nrros protein_coding protein_coding MGP_129S1SvImJ_T0044074.1 MGP_129S1SvImJ_G0022730.1 mouse_genomes_project 16 30183002 30207813 - MGP_129S1SvImJ_P0044074 Nrros protein_coding protein_coding MGP_129S1SvImJ_T0044075.1 MGP_129S1SvImJ_G0022730.1 mouse_genomes_project 16 30183002 30207831 - MGP_129S1SvImJ_P0044075 Nrros protein_coding protein_coding MGP_129S1SvImJ_T0044076.1 MGP_129S1SvImJ_G0022730.1 mouse_genomes_project 16 30184859 30207931 - MGP_129S1SvImJ_P0044076 Nrros protein_coding protein_coding MGP_129S1SvImJ_T0044077.1 MGP_129S1SvImJ_G0022730.1 mouse_genomes_project 16 30184992 30207813 - Nrros protein_coding processed_transcript MGP_129S1SvImJ_T0044078.1 MGP_129S1SvImJ_G0022730.1 mouse_genomes_project 16 30185004 30189687 - Nrros protein_coding processed_transcript MGP_129S1SvImJ_T0044079.1 MGP_129S1SvImJ_G0022730.1 mouse_genomes_project 16 30185051 30207819 - MGP_129S1SvImJ_P0044079 Nrros protein_coding protein_coding MGP_129S1SvImJ_T0044080.1 MGP_129S1SvImJ_G0022730.1 mouse_genomes_project 16 30187727 30207794 - Nrros protein_coding processed_transcript MGP_129S1SvImJ_T0000980.1 MGP_129S1SvImJ_G0000911.1 mouse_genomes_project 16 38722825 38722868 + TEC TEC MGP_129S1SvImJ_T0043076.1 MGP_129S1SvImJ_G0022495.1 mouse_genomes_project 16 5299611 5303438 - MGP_129S1SvImJ_P0043076 Tmem186 protein_coding protein_coding MGP_129S1SvImJ_T0013200.1 MGP_129S1SvImJ_G0011289.1 mouse_genomes_project 16 45895367 45910212 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101641.1 MGP_129S1SvImJ_G0039675.1 mouse_genomes_project 16 36381618 36382708 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0044426.1 MGP_129S1SvImJ_G0022821.1 mouse_genomes_project 16 37282864 37310262 + MGP_129S1SvImJ_P0044426 B4galt4 protein_coding protein_coding MGP_129S1SvImJ_T0044427.1 MGP_129S1SvImJ_G0022821.1 mouse_genomes_project 16 37282903 37310256 + MGP_129S1SvImJ_P0044427 B4galt4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044428.1 MGP_129S1SvImJ_G0022821.1 mouse_genomes_project 16 37301546 37309719 + MGP_129S1SvImJ_P0044428 B4galt4 protein_coding protein_coding MGP_129S1SvImJ_T0044429.1 MGP_129S1SvImJ_G0022821.1 mouse_genomes_project 16 37303623 37306986 + B4galt4 protein_coding retained_intron MGP_129S1SvImJ_T0044184.1 MGP_129S1SvImJ_G0022756.1 mouse_genomes_project 16 31729843 31879451 + MGP_129S1SvImJ_P0044184 Slc12a8 protein_coding protein_coding MGP_129S1SvImJ_T0044185.1 MGP_129S1SvImJ_G0022756.1 mouse_genomes_project 16 31809559 31879445 + MGP_129S1SvImJ_P0044185 Slc12a8 protein_coding protein_coding MGP_129S1SvImJ_T0044186.1 MGP_129S1SvImJ_G0022756.1 mouse_genomes_project 16 31831042 31841004 + Slc12a8 protein_coding processed_transcript MGP_129S1SvImJ_T0013223.1 MGP_129S1SvImJ_G0011312.1 mouse_genomes_project 16 91888432 91888984 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0044814.1 MGP_129S1SvImJ_G0022932.1 mouse_genomes_project 16 58897088 58930797 - MGP_129S1SvImJ_P0044814 Arl6 protein_coding protein_coding MGP_129S1SvImJ_T0044815.1 MGP_129S1SvImJ_G0022932.1 mouse_genomes_project 16 58897467 58931021 - MGP_129S1SvImJ_P0044815 Arl6 protein_coding protein_coding MGP_129S1SvImJ_T0044816.1 MGP_129S1SvImJ_G0022932.1 mouse_genomes_project 16 58897744 58922987 - MGP_129S1SvImJ_P0044816 Arl6 protein_coding protein_coding MGP_129S1SvImJ_T0044817.1 MGP_129S1SvImJ_G0022932.1 mouse_genomes_project 16 58906648 58930759 - MGP_129S1SvImJ_P0044817 Arl6 protein_coding protein_coding MGP_129S1SvImJ_T0013203.1 MGP_129S1SvImJ_G0011292.1 mouse_genomes_project 16 49010941 49011931 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003679.1 MGP_129S1SvImJ_G0003329.1 mouse_genomes_project 16 14264490 14265299 + Gm15646 antisense antisense MGP_129S1SvImJ_T0010123.1 MGP_129S1SvImJ_G0008239.1 mouse_genomes_project 16 5287512 5287620 - Gm26445 miRNA miRNA MGP_129S1SvImJ_T0043368.1 MGP_129S1SvImJ_G0022567.1 mouse_genomes_project 16 14182262 14201900 + MGP_129S1SvImJ_P0043368 Ypel1 protein_coding protein_coding MGP_129S1SvImJ_T0043369.1 MGP_129S1SvImJ_G0022567.1 mouse_genomes_project 16 14182724 14201505 + Ypel1 protein_coding processed_transcript MGP_129S1SvImJ_T0043370.1 MGP_129S1SvImJ_G0022567.1 mouse_genomes_project 16 14182764 14192493 + Ypel1 protein_coding retained_intron MGP_129S1SvImJ_T0043371.1 MGP_129S1SvImJ_G0022567.1 mouse_genomes_project 16 14182765 14197258 + MGP_129S1SvImJ_P0043371 Ypel1 protein_coding protein_coding MGP_129S1SvImJ_T0043372.1 MGP_129S1SvImJ_G0022567.1 mouse_genomes_project 16 14182792 14202209 + MGP_129S1SvImJ_P0043372 Ypel1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043373.1 MGP_129S1SvImJ_G0022567.1 mouse_genomes_project 16 14182795 14197340 + MGP_129S1SvImJ_P0043373 Ypel1 protein_coding protein_coding MGP_129S1SvImJ_T0043374.1 MGP_129S1SvImJ_G0022567.1 mouse_genomes_project 16 14182870 14197858 + MGP_129S1SvImJ_P0043374 Ypel1 protein_coding protein_coding MGP_129S1SvImJ_T0043530.1 MGP_129S1SvImJ_G0022599.1 mouse_genomes_project 16 15114449 15117458 - MGP_129S1SvImJ_P0043530 Slc25a1 protein_coding protein_coding MGP_129S1SvImJ_T0043531.1 MGP_129S1SvImJ_G0022599.1 mouse_genomes_project 16 15114920 15116582 - Slc25a1 protein_coding retained_intron MGP_129S1SvImJ_T0043532.1 MGP_129S1SvImJ_G0022599.1 mouse_genomes_project 16 15114954 15116655 - MGP_129S1SvImJ_P0043532 Slc25a1 protein_coding protein_coding MGP_129S1SvImJ_T0043533.1 MGP_129S1SvImJ_G0022599.1 mouse_genomes_project 16 15115504 15117126 - Slc25a1 protein_coding retained_intron MGP_129S1SvImJ_T0043534.1 MGP_129S1SvImJ_G0022599.1 mouse_genomes_project 16 15116388 15117368 - Slc25a1 protein_coding retained_intron MGP_129S1SvImJ_T0043535.1 MGP_129S1SvImJ_G0022599.1 mouse_genomes_project 16 15116655 15117448 - Slc25a1 protein_coding retained_intron MGP_129S1SvImJ_T0043826.1 MGP_129S1SvImJ_G0022663.1 mouse_genomes_project 16 19394931 19403865 - MGP_129S1SvImJ_P0043826 Tmem41a protein_coding protein_coding MGP_129S1SvImJ_T0044858.1 MGP_129S1SvImJ_G0022949.1 mouse_genomes_project 16 70128863 70394869 + MGP_129S1SvImJ_P0044858 Gbe1 protein_coding protein_coding MGP_129S1SvImJ_T0044859.1 MGP_129S1SvImJ_G0022949.1 mouse_genomes_project 16 70128977 70181868 + Gbe1 protein_coding retained_intron MGP_129S1SvImJ_T0044860.1 MGP_129S1SvImJ_G0022949.1 mouse_genomes_project 16 70128978 70363906 + Gbe1 protein_coding retained_intron MGP_129S1SvImJ_T0044861.1 MGP_129S1SvImJ_G0022949.1 mouse_genomes_project 16 70128978 70363475 + MGP_129S1SvImJ_P0044861 Gbe1 protein_coding protein_coding MGP_129S1SvImJ_T0044862.1 MGP_129S1SvImJ_G0022949.1 mouse_genomes_project 16 70129001 70394869 + MGP_129S1SvImJ_P0044862 Gbe1 protein_coding protein_coding MGP_129S1SvImJ_T0044863.1 MGP_129S1SvImJ_G0022949.1 mouse_genomes_project 16 70129048 70394867 + MGP_129S1SvImJ_P0044863 Gbe1 protein_coding protein_coding MGP_129S1SvImJ_T0044864.1 MGP_129S1SvImJ_G0022949.1 mouse_genomes_project 16 70382544 70394650 + Gbe1 protein_coding retained_intron MGP_129S1SvImJ_T0010152.1 MGP_129S1SvImJ_G0008268.1 mouse_genomes_project 16 31271884 31271969 + Mir1947 miRNA miRNA MGP_129S1SvImJ_T0003698.1 MGP_129S1SvImJ_G0003344.1 mouse_genomes_project 16 34763925 34779123 + Gm15845 antisense antisense MGP_129S1SvImJ_T0043100.1 MGP_129S1SvImJ_G0022501.1 mouse_genomes_project 16 6305625 6747416 - MGP_129S1SvImJ_P0043100 protein_coding protein_coding MGP_129S1SvImJ_T0043101.1 MGP_129S1SvImJ_G0022501.1 mouse_genomes_project 16 6510818 6548466 - protein_coding processed_transcript MGP_129S1SvImJ_T0043102.1 MGP_129S1SvImJ_G0022501.1 mouse_genomes_project 16 6744167 6748053 - protein_coding retained_intron MGP_129S1SvImJ_T0043103.1 MGP_129S1SvImJ_G0022501.1 mouse_genomes_project 16 6744167 6746763 - protein_coding retained_intron MGP_129S1SvImJ_T0044661.1 MGP_129S1SvImJ_G0022878.1 mouse_genomes_project 16 51197197 51406973 - MGP_129S1SvImJ_P0044661 Alcam protein_coding protein_coding MGP_129S1SvImJ_T0044662.1 MGP_129S1SvImJ_G0022878.1 mouse_genomes_project 16 51199288 51240907 - MGP_129S1SvImJ_P0044662 Alcam protein_coding protein_coding MGP_129S1SvImJ_T0044663.1 MGP_129S1SvImJ_G0022878.1 mouse_genomes_project 16 51199668 51405364 - MGP_129S1SvImJ_P0044663 Alcam protein_coding protein_coding MGP_129S1SvImJ_T0044664.1 MGP_129S1SvImJ_G0022878.1 mouse_genomes_project 16 51201389 51217259 - Alcam protein_coding retained_intron MGP_129S1SvImJ_T0044665.1 MGP_129S1SvImJ_G0022878.1 mouse_genomes_project 16 51201422 51219313 - Alcam protein_coding retained_intron MGP_129S1SvImJ_T0044666.1 MGP_129S1SvImJ_G0022878.1 mouse_genomes_project 16 51216358 51405364 - MGP_129S1SvImJ_P0044666 Alcam protein_coding protein_coding MGP_129S1SvImJ_T0044667.1 MGP_129S1SvImJ_G0022878.1 mouse_genomes_project 16 51249213 51405553 - MGP_129S1SvImJ_P0044667 Alcam protein_coding protein_coding MGP_129S1SvImJ_T0043077.1 MGP_129S1SvImJ_G0022496.1 mouse_genomes_project 16 5303399 5325982 + MGP_129S1SvImJ_P0043077 Pmm2 protein_coding protein_coding MGP_129S1SvImJ_T0043078.1 MGP_129S1SvImJ_G0022496.1 mouse_genomes_project 16 5303448 5317566 + Pmm2 protein_coding retained_intron MGP_129S1SvImJ_T0043079.1 MGP_129S1SvImJ_G0022496.1 mouse_genomes_project 16 5303463 5312232 + Pmm2 protein_coding retained_intron MGP_129S1SvImJ_T0043080.1 MGP_129S1SvImJ_G0022496.1 mouse_genomes_project 16 5303767 5319878 + Pmm2 protein_coding processed_transcript MGP_129S1SvImJ_T0043081.1 MGP_129S1SvImJ_G0022496.1 mouse_genomes_project 16 5313186 5317161 + Pmm2 protein_coding retained_intron MGP_129S1SvImJ_T0043082.1 MGP_129S1SvImJ_G0022496.1 mouse_genomes_project 16 5317042 5325193 + Pmm2 protein_coding retained_intron MGP_129S1SvImJ_T0013138.1 MGP_129S1SvImJ_G0011227.1 mouse_genomes_project 16 5287535 5288070 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100812.1 MGP_129S1SvImJ_G0038879.1 mouse_genomes_project 16 88251801 88251937 - Gm24891 snoRNA snoRNA MGP_129S1SvImJ_T0099533.1 MGP_129S1SvImJ_G0037600.1 mouse_genomes_project 16 78781133 78781239 + Gm24861 snRNA snRNA MGP_129S1SvImJ_T0044520.1 MGP_129S1SvImJ_G0022840.1 mouse_genomes_project 16 43238079 43314608 - MGP_129S1SvImJ_P0044520 Boc protein_coding protein_coding MGP_129S1SvImJ_T0044521.1 MGP_129S1SvImJ_G0022840.1 mouse_genomes_project 16 43238083 43314635 - MGP_129S1SvImJ_P0044521 Boc protein_coding protein_coding MGP_129S1SvImJ_T0044522.1 MGP_129S1SvImJ_G0022840.1 mouse_genomes_project 16 43238086 43314525 - MGP_129S1SvImJ_P0044522 Boc protein_coding unknown_likely_coding MGP_129S1SvImJ_T0100786.1 MGP_129S1SvImJ_G0038853.1 mouse_genomes_project 16 36669802 36669934 + Gm25617 snoRNA snoRNA MGP_129S1SvImJ_T0099513.1 MGP_129S1SvImJ_G0037580.1 mouse_genomes_project 16 34650282 34650386 - Gm22263 snRNA snRNA MGP_129S1SvImJ_T0006888.1 MGP_129S1SvImJ_G0005679.1 mouse_genomes_project 16 91689408 91691042 + Gm17518 lincRNA lincRNA MGP_129S1SvImJ_T0003674.1 MGP_129S1SvImJ_G0003325.1 mouse_genomes_project 16 10346927 10367336 - antisense antisense MGP_129S1SvImJ_T0003675.1 MGP_129S1SvImJ_G0003325.1 mouse_genomes_project 16 10359561 10367332 - antisense antisense MGP_129S1SvImJ_T0044721.1 MGP_129S1SvImJ_G0022891.1 mouse_genomes_project 16 55859171 55938528 - MGP_129S1SvImJ_P0044721 Adgrg7 protein_coding protein_coding MGP_129S1SvImJ_T0044271.1 MGP_129S1SvImJ_G0022778.1 mouse_genomes_project 16 34441547 34463537 + MGP_129S1SvImJ_P0044271 Ccdc58 protein_coding protein_coding MGP_129S1SvImJ_T0044272.1 MGP_129S1SvImJ_G0022778.1 mouse_genomes_project 16 34441547 34463537 + MGP_129S1SvImJ_P0044272 Ccdc58 protein_coding protein_coding MGP_129S1SvImJ_T0044273.1 MGP_129S1SvImJ_G0022778.1 mouse_genomes_project 16 34451873 34463537 + MGP_129S1SvImJ_P0044273 Ccdc58 protein_coding protein_coding MGP_129S1SvImJ_T0045130.1 MGP_129S1SvImJ_G0023047.1 mouse_genomes_project 16 92707777 92714945 - MGP_129S1SvImJ_P0045130 Donson protein_coding protein_coding MGP_129S1SvImJ_T0045131.1 MGP_129S1SvImJ_G0023047.1 mouse_genomes_project 16 92709774 92719275 - Donson protein_coding retained_intron MGP_129S1SvImJ_T0045132.1 MGP_129S1SvImJ_G0023047.1 mouse_genomes_project 16 92709774 92719275 - MGP_129S1SvImJ_P0045132 Donson protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045133.1 MGP_129S1SvImJ_G0023047.1 mouse_genomes_project 16 92709774 92719275 - MGP_129S1SvImJ_P0045133 Donson protein_coding protein_coding MGP_129S1SvImJ_T0045134.1 MGP_129S1SvImJ_G0023047.1 mouse_genomes_project 16 92710031 92718381 - MGP_129S1SvImJ_P0045134 Donson protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045135.1 MGP_129S1SvImJ_G0023047.1 mouse_genomes_project 16 92710031 92719227 - MGP_129S1SvImJ_P0045135 Donson protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045136.1 MGP_129S1SvImJ_G0023047.1 mouse_genomes_project 16 92710031 92718381 - MGP_129S1SvImJ_P0045136 Donson protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045137.1 MGP_129S1SvImJ_G0023047.1 mouse_genomes_project 16 92710274 92719222 - MGP_129S1SvImJ_P0045137 Donson protein_coding protein_coding MGP_129S1SvImJ_T0045138.1 MGP_129S1SvImJ_G0023047.1 mouse_genomes_project 16 92710337 92719213 - MGP_129S1SvImJ_P0045138 Donson protein_coding protein_coding MGP_129S1SvImJ_T0098840.1 MGP_129S1SvImJ_G0036920.1 mouse_genomes_project 16 23748123 23758281 - AU015336 sense_intronic sense_intronic MGP_129S1SvImJ_T0000975.1 MGP_129S1SvImJ_G0000906.1 mouse_genomes_project 16 633508 637429 - TEC TEC MGP_129S1SvImJ_T0044237.1 MGP_129S1SvImJ_G0022769.1 mouse_genomes_project 16 33855596 33976998 + Sema5b protein_coding retained_intron MGP_129S1SvImJ_T0044238.1 MGP_129S1SvImJ_G0022769.1 mouse_genomes_project 16 33855813 33996682 + MGP_129S1SvImJ_P0044238 Sema5b protein_coding protein_coding MGP_129S1SvImJ_T0044239.1 MGP_129S1SvImJ_G0022769.1 mouse_genomes_project 16 33856022 33996682 + MGP_129S1SvImJ_P0044239 Sema5b protein_coding protein_coding MGP_129S1SvImJ_T0044240.1 MGP_129S1SvImJ_G0022769.1 mouse_genomes_project 16 33988615 33989008 + Sema5b protein_coding retained_intron MGP_129S1SvImJ_T0044241.1 MGP_129S1SvImJ_G0022769.1 mouse_genomes_project 16 33989105 33997153 + MGP_129S1SvImJ_P0044241 Sema5b protein_coding protein_coding MGP_129S1SvImJ_T0044242.1 MGP_129S1SvImJ_G0022769.1 mouse_genomes_project 16 33989955 33990801 + Sema5b protein_coding retained_intron MGP_129S1SvImJ_T0044243.1 MGP_129S1SvImJ_G0022769.1 mouse_genomes_project 16 33993725 33995735 + MGP_129S1SvImJ_P0044243 Sema5b protein_coding protein_coding MGP_129S1SvImJ_T0044244.1 MGP_129S1SvImJ_G0022769.1 mouse_genomes_project 16 33994891 33995875 + Sema5b protein_coding retained_intron MGP_129S1SvImJ_T0098322.1 MGP_129S1SvImJ_G0036407.1 mouse_genomes_project 16 12982739 12983920 + pseudogene pseudogene MGP_129S1SvImJ_T0044274.1 MGP_129S1SvImJ_G0022779.1 mouse_genomes_project 16 34492211 34503474 - MGP_129S1SvImJ_P0044274 Csta1 protein_coding protein_coding MGP_129S1SvImJ_T0044275.1 MGP_129S1SvImJ_G0022779.1 mouse_genomes_project 16 34494434 34503438 - MGP_129S1SvImJ_P0044275 Csta1 protein_coding protein_coding MGP_129S1SvImJ_T0043084.1 MGP_129S1SvImJ_G0022498.1 mouse_genomes_project 16 5353057 5356193 + MGP_129S1SvImJ_P0043084 Gm43786 protein_coding protein_coding MGP_129S1SvImJ_T0043085.1 MGP_129S1SvImJ_G0022498.1 mouse_genomes_project 16 5355117 5356199 + Gm43786 protein_coding processed_transcript MGP_129S1SvImJ_T0006893.1 MGP_129S1SvImJ_G0005682.1 mouse_genomes_project 16 94990256 94992995 - 2310043M15Rik lincRNA lincRNA MGP_129S1SvImJ_T0003671.1 MGP_129S1SvImJ_G0003322.1 mouse_genomes_project 16 1534512 1539555 + Gm42477 antisense antisense MGP_129S1SvImJ_T0003721.1 MGP_129S1SvImJ_G0003363.1 mouse_genomes_project 16 97511221 97513334 - Gm15317 antisense antisense MGP_129S1SvImJ_T0043041.1 MGP_129S1SvImJ_G0022483.1 mouse_genomes_project 16 1579771 1619053 + MGP_129S1SvImJ_P0043041 Ubn1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0044642.1 MGP_129S1SvImJ_G0022873.1 mouse_genomes_project 16 48573189 48645262 + MGP_129S1SvImJ_P0044642 Ift57 protein_coding protein_coding MGP_129S1SvImJ_T0044643.1 MGP_129S1SvImJ_G0022873.1 mouse_genomes_project 16 48573260 48642766 + MGP_129S1SvImJ_P0044643 Ift57 protein_coding protein_coding MGP_129S1SvImJ_T0044644.1 MGP_129S1SvImJ_G0022873.1 mouse_genomes_project 16 48573311 48586688 + Ift57 protein_coding processed_transcript MGP_129S1SvImJ_T0044645.1 MGP_129S1SvImJ_G0022873.1 mouse_genomes_project 16 48585742 48644252 + MGP_129S1SvImJ_P0044645 Ift57 protein_coding protein_coding MGP_129S1SvImJ_T0044606.1 MGP_129S1SvImJ_G0022860.1 mouse_genomes_project 16 44765403 44821618 - MGP_129S1SvImJ_P0044606 Plcxd2 protein_coding protein_coding MGP_129S1SvImJ_T0045087.1 MGP_129S1SvImJ_G0023037.1 mouse_genomes_project 16 92262382 92264544 + MGP_129S1SvImJ_P0045087 Olig1 protein_coding protein_coding MGP_129S1SvImJ_T0044843.1 MGP_129S1SvImJ_G0022944.1 mouse_genomes_project 16 65045904 65062067 + MGP_129S1SvImJ_P0044843 Pou1f1 protein_coding protein_coding MGP_129S1SvImJ_T0044844.1 MGP_129S1SvImJ_G0022944.1 mouse_genomes_project 16 65045905 65052242 + Pou1f1 protein_coding retained_intron MGP_129S1SvImJ_T0044845.1 MGP_129S1SvImJ_G0022944.1 mouse_genomes_project 16 65045905 65062685 + MGP_129S1SvImJ_P0044845 Pou1f1 protein_coding protein_coding MGP_129S1SvImJ_T0044846.1 MGP_129S1SvImJ_G0022944.1 mouse_genomes_project 16 65045941 65061951 + MGP_129S1SvImJ_P0044846 Pou1f1 protein_coding protein_coding MGP_129S1SvImJ_T0044847.1 MGP_129S1SvImJ_G0022944.1 mouse_genomes_project 16 65049975 65061922 + MGP_129S1SvImJ_P0044847 Pou1f1 protein_coding protein_coding MGP_129S1SvImJ_T0045016.1 MGP_129S1SvImJ_G0023019.1 mouse_genomes_project 16 90274052 90274766 - MGP_129S1SvImJ_P0045016 Krtap6-2 protein_coding protein_coding MGP_129S1SvImJ_T0043823.1 MGP_129S1SvImJ_G0022660.1 mouse_genomes_project 16 19077011 19127694 - MGP_129S1SvImJ_P0043823 2510009E07Rik protein_coding protein_coding MGP_129S1SvImJ_T0043552.1 MGP_129S1SvImJ_G0022604.1 mouse_genomes_project 16 15428023 15442400 - MGP_129S1SvImJ_P0043552 Zdhhc8 protein_coding protein_coding MGP_129S1SvImJ_T0044081.1 MGP_129S1SvImJ_G0022731.1 mouse_genomes_project 16 30230592 30231356 + MGP_129S1SvImJ_P0044081 Bex6 protein_coding protein_coding MGP_129S1SvImJ_T0000137.1 MGP_129S1SvImJ_G0000105.1 mouse_genomes_project 16 16520359 16520843 - MGP_129S1SvImJ_P0000137 Iglv3 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0044099.1 MGP_129S1SvImJ_G0022740.1 mouse_genomes_project 16 30557529 30574564 - MGP_129S1SvImJ_P0044099 Slc51a protein_coding protein_coding MGP_129S1SvImJ_T0010137.1 MGP_129S1SvImJ_G0008253.1 mouse_genomes_project 16 15499953 15500041 - Gm24572 miRNA miRNA MGP_129S1SvImJ_T0043825.1 MGP_129S1SvImJ_G0022662.1 mouse_genomes_project 16 19346619 19392482 + MGP_129S1SvImJ_P0043825 Map3k13 protein_coding protein_coding MGP_129S1SvImJ_T0042922.1 MGP_129S1SvImJ_G0022458.1 mouse_genomes_project 16 430538 440540 - MGP_129S1SvImJ_P0042922 Slx4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042923.1 MGP_129S1SvImJ_G0022458.1 mouse_genomes_project 16 430556 455780 - MGP_129S1SvImJ_P0042923 Slx4 protein_coding protein_coding MGP_129S1SvImJ_T0042924.1 MGP_129S1SvImJ_G0022458.1 mouse_genomes_project 16 430557 447917 - MGP_129S1SvImJ_P0042924 Slx4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042925.1 MGP_129S1SvImJ_G0022458.1 mouse_genomes_project 16 430561 436953 - Slx4 protein_coding retained_intron MGP_129S1SvImJ_T0042926.1 MGP_129S1SvImJ_G0022458.1 mouse_genomes_project 16 430566 433638 - Slx4 protein_coding retained_intron MGP_129S1SvImJ_T0042927.1 MGP_129S1SvImJ_G0022458.1 mouse_genomes_project 16 431254 457685 - MGP_129S1SvImJ_P0042927 Slx4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042928.1 MGP_129S1SvImJ_G0022458.1 mouse_genomes_project 16 446966 455352 - MGP_129S1SvImJ_P0042928 Slx4 protein_coding protein_coding MGP_129S1SvImJ_T0042929.1 MGP_129S1SvImJ_G0022458.1 mouse_genomes_project 16 455102 457870 - MGP_129S1SvImJ_P0042929 Slx4 protein_coding protein_coding MGP_129S1SvImJ_T0042930.1 MGP_129S1SvImJ_G0022458.1 mouse_genomes_project 16 455300 457852 - MGP_129S1SvImJ_P0042930 Slx4 protein_coding protein_coding MGP_129S1SvImJ_T0006832.1 MGP_129S1SvImJ_G0005636.1 mouse_genomes_project 16 7658769 7664326 + Gm26822 lincRNA lincRNA MGP_129S1SvImJ_T0100787.1 MGP_129S1SvImJ_G0038854.1 mouse_genomes_project 16 36722719 36722848 - Gm27931 snoRNA snoRNA MGP_129S1SvImJ_T0045074.1 MGP_129S1SvImJ_G0023033.1 mouse_genomes_project 16 91994433 92026122 - MGP_129S1SvImJ_P0045074 Paxbp1 protein_coding protein_coding MGP_129S1SvImJ_T0045075.1 MGP_129S1SvImJ_G0023033.1 mouse_genomes_project 16 91995306 92025743 - MGP_129S1SvImJ_P0045075 Paxbp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045076.1 MGP_129S1SvImJ_G0023033.1 mouse_genomes_project 16 91997239 91999615 - Paxbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0045077.1 MGP_129S1SvImJ_G0023033.1 mouse_genomes_project 16 92005194 92011354 - Paxbp1 protein_coding retained_intron MGP_129S1SvImJ_T0045078.1 MGP_129S1SvImJ_G0023033.1 mouse_genomes_project 16 92005939 92011041 - MGP_129S1SvImJ_P0045078 Paxbp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045079.1 MGP_129S1SvImJ_G0023033.1 mouse_genomes_project 16 92006058 92008019 - Paxbp1 protein_coding retained_intron MGP_129S1SvImJ_T0045080.1 MGP_129S1SvImJ_G0023033.1 mouse_genomes_project 16 92010975 92015431 - Paxbp1 protein_coding retained_intron MGP_129S1SvImJ_T0045081.1 MGP_129S1SvImJ_G0023033.1 mouse_genomes_project 16 92012101 92025933 - Paxbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0044942.1 MGP_129S1SvImJ_G0022975.1 mouse_genomes_project 16 88065881 88080219 + MGP_129S1SvImJ_P0044942 N6amt1 protein_coding protein_coding MGP_129S1SvImJ_T0044943.1 MGP_129S1SvImJ_G0022975.1 mouse_genomes_project 16 88065897 88078318 + MGP_129S1SvImJ_P0044943 N6amt1 protein_coding protein_coding MGP_129S1SvImJ_T0044944.1 MGP_129S1SvImJ_G0022975.1 mouse_genomes_project 16 88065899 88080333 + MGP_129S1SvImJ_P0044944 N6amt1 protein_coding protein_coding MGP_129S1SvImJ_T0044528.1 MGP_129S1SvImJ_G0022842.1 mouse_genomes_project 16 43503161 43512757 - MGP_129S1SvImJ_P0044528 Gtpbp8 protein_coding protein_coding MGP_129S1SvImJ_T0044529.1 MGP_129S1SvImJ_G0022842.1 mouse_genomes_project 16 43505535 43512753 - MGP_129S1SvImJ_P0044529 Gtpbp8 protein_coding protein_coding MGP_129S1SvImJ_T0044530.1 MGP_129S1SvImJ_G0022842.1 mouse_genomes_project 16 43505658 43512677 - MGP_129S1SvImJ_P0044530 Gtpbp8 protein_coding protein_coding MGP_129S1SvImJ_T0044531.1 MGP_129S1SvImJ_G0022842.1 mouse_genomes_project 16 43510201 43512703 - MGP_129S1SvImJ_P0044531 Gtpbp8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0099536.1 MGP_129S1SvImJ_G0037603.1 mouse_genomes_project 16 90302024 90302129 - Gm23655 snRNA snRNA MGP_129S1SvImJ_T0044857.1 MGP_129S1SvImJ_G0022948.1 mouse_genomes_project 16 69658276 69667688 - MGP_129S1SvImJ_P0044857 Speer2 protein_coding protein_coding MGP_129S1SvImJ_T0045019.1 MGP_129S1SvImJ_G0023022.1 mouse_genomes_project 16 90427138 90428146 - MGP_129S1SvImJ_P0045019 Krtap11-1 protein_coding protein_coding MGP_129S1SvImJ_T0045004.1 MGP_129S1SvImJ_G0023009.1 mouse_genomes_project 16 89876408 89877677 - MGP_129S1SvImJ_P0045004 Krtap6-5 protein_coding protein_coding MGP_129S1SvImJ_T0003676.1 MGP_129S1SvImJ_G0003326.1 mouse_genomes_project 16 10713069 10724715 + antisense antisense MGP_129S1SvImJ_T0100768.1 MGP_129S1SvImJ_G0038835.1 mouse_genomes_project 16 10497228 10497352 - Gm25276 snoRNA snoRNA MGP_129S1SvImJ_T0013212.1 MGP_129S1SvImJ_G0011301.1 mouse_genomes_project 16 64433031 64433950 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0044658.1 MGP_129S1SvImJ_G0022876.1 mouse_genomes_project 16 49513009 49514305 - MGP_129S1SvImJ_P0044658 Ccdc54 protein_coding protein_coding MGP_129S1SvImJ_T0000996.1 MGP_129S1SvImJ_G0000926.1 mouse_genomes_project 16 77747546 77750418 + TEC TEC MGP_129S1SvImJ_T0003704.1 MGP_129S1SvImJ_G0003350.1 mouse_genomes_project 16 44528919 44529540 + Gm15591 antisense antisense MGP_129S1SvImJ_T0102276.1 MGP_129S1SvImJ_G0040110.1 mouse_genomes_project 16 58265395 58266313 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0003683.1 MGP_129S1SvImJ_G0003333.1 mouse_genomes_project 16 20022501 20028676 + 9230117E06Rik antisense antisense MGP_129S1SvImJ_T0044283.1 MGP_129S1SvImJ_G0022786.1 mouse_genomes_project 16 34757013 34764405 - MGP_129S1SvImJ_P0044283 BC100530 protein_coding protein_coding MGP_129S1SvImJ_T0044284.1 MGP_129S1SvImJ_G0022787.1 mouse_genomes_project 16 34778105 34792147 - MGP_129S1SvImJ_P0044284 2010005H15Rik protein_coding protein_coding MGP_129S1SvImJ_T0044285.1 MGP_129S1SvImJ_G0022787.1 mouse_genomes_project 16 34778160 34792115 - MGP_129S1SvImJ_P0044285 2010005H15Rik protein_coding protein_coding MGP_129S1SvImJ_T0043083.1 MGP_129S1SvImJ_G0022497.1 mouse_genomes_project 16 5327037 5340604 - MGP_129S1SvImJ_P0043083 Carhsp1 protein_coding protein_coding MGP_129S1SvImJ_T0044691.1 MGP_129S1SvImJ_G0022886.1 mouse_genomes_project 16 55136804 55142023 - MGP_129S1SvImJ_P0044691 Trmt10c protein_coding protein_coding MGP_129S1SvImJ_T0102271.1 MGP_129S1SvImJ_G0040105.1 mouse_genomes_project 16 20549223 20552124 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0043662.1 MGP_129S1SvImJ_G0022627.1 mouse_genomes_project 16 16788918 16789857 - MGP_129S1SvImJ_P0043662 Olfr167 protein_coding protein_coding MGP_129S1SvImJ_T0044796.1 MGP_129S1SvImJ_G0022922.1 mouse_genomes_project 16 58415348 58416278 - MGP_129S1SvImJ_P0044796 Olfr196 protein_coding protein_coding MGP_129S1SvImJ_T0000984.1 MGP_129S1SvImJ_G0000915.1 mouse_genomes_project 16 57504169 57506463 - TEC TEC MGP_129S1SvImJ_T0043202.1 MGP_129S1SvImJ_G0022527.1 mouse_genomes_project 16 8805542 8835583 + MGP_129S1SvImJ_P0043202 Gm9961 protein_coding protein_coding MGP_129S1SvImJ_T0098514.1 MGP_129S1SvImJ_G0036599.1 mouse_genomes_project 16 1864447 1864569 - n-R5s30 rRNA rRNA MGP_129S1SvImJ_T0044948.1 MGP_129S1SvImJ_G0022978.1 mouse_genomes_project 16 88170258 88182757 + MGP_129S1SvImJ_P0044948 Usp16 protein_coding protein_coding MGP_129S1SvImJ_T0044949.1 MGP_129S1SvImJ_G0022978.1 mouse_genomes_project 16 88170283 88206665 + MGP_129S1SvImJ_P0044949 Usp16 protein_coding protein_coding MGP_129S1SvImJ_T0044950.1 MGP_129S1SvImJ_G0022978.1 mouse_genomes_project 16 88170300 88182274 + Usp16 protein_coding retained_intron MGP_129S1SvImJ_T0044951.1 MGP_129S1SvImJ_G0022978.1 mouse_genomes_project 16 88170316 88191732 + Usp16 protein_coding retained_intron MGP_129S1SvImJ_T0044952.1 MGP_129S1SvImJ_G0022978.1 mouse_genomes_project 16 88170322 88187055 + Usp16 protein_coding processed_transcript MGP_129S1SvImJ_T0044953.1 MGP_129S1SvImJ_G0022978.1 mouse_genomes_project 16 88170331 88205854 + MGP_129S1SvImJ_P0044953 Usp16 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044954.1 MGP_129S1SvImJ_G0022978.1 mouse_genomes_project 16 88193561 88202457 + Usp16 protein_coding retained_intron MGP_129S1SvImJ_T0044955.1 MGP_129S1SvImJ_G0022978.1 mouse_genomes_project 16 88195637 88201751 + Usp16 protein_coding retained_intron MGP_129S1SvImJ_T0044956.1 MGP_129S1SvImJ_G0022978.1 mouse_genomes_project 16 88203981 88205724 + Usp16 protein_coding retained_intron MGP_129S1SvImJ_T0044957.1 MGP_129S1SvImJ_G0022978.1 mouse_genomes_project 16 88205394 88205842 + Usp16 protein_coding retained_intron MGP_129S1SvImJ_T0000976.1 MGP_129S1SvImJ_G0000907.1 mouse_genomes_project 16 15111281 15112447 + TEC TEC MGP_129S1SvImJ_T0043442.1 MGP_129S1SvImJ_G0022582.1 mouse_genomes_project 16 14662181 14683296 + MGP_129S1SvImJ_P0043442 Lztr1 protein_coding protein_coding MGP_129S1SvImJ_T0043443.1 MGP_129S1SvImJ_G0022582.1 mouse_genomes_project 16 14662461 14683294 + MGP_129S1SvImJ_P0043443 Lztr1 protein_coding protein_coding MGP_129S1SvImJ_T0043444.1 MGP_129S1SvImJ_G0022582.1 mouse_genomes_project 16 14662466 14681181 + Lztr1 protein_coding retained_intron MGP_129S1SvImJ_T0043445.1 MGP_129S1SvImJ_G0022582.1 mouse_genomes_project 16 14662466 14665719 + Lztr1 protein_coding retained_intron MGP_129S1SvImJ_T0043446.1 MGP_129S1SvImJ_G0022582.1 mouse_genomes_project 16 14662705 14671160 + Lztr1 protein_coding processed_transcript MGP_129S1SvImJ_T0043447.1 MGP_129S1SvImJ_G0022582.1 mouse_genomes_project 16 14664555 14677377 + Lztr1 protein_coding processed_transcript MGP_129S1SvImJ_T0043448.1 MGP_129S1SvImJ_G0022582.1 mouse_genomes_project 16 14670936 14675898 + Lztr1 protein_coding processed_transcript MGP_129S1SvImJ_T0043449.1 MGP_129S1SvImJ_G0022582.1 mouse_genomes_project 16 14674451 14676896 + Lztr1 protein_coding retained_intron MGP_129S1SvImJ_T0043450.1 MGP_129S1SvImJ_G0022582.1 mouse_genomes_project 16 14677285 14683294 + MGP_129S1SvImJ_P0043450 Lztr1 protein_coding protein_coding MGP_129S1SvImJ_T0043451.1 MGP_129S1SvImJ_G0022582.1 mouse_genomes_project 16 14679010 14680585 + Lztr1 protein_coding retained_intron MGP_129S1SvImJ_T0043452.1 MGP_129S1SvImJ_G0022582.1 mouse_genomes_project 16 14680427 14682734 + Lztr1 protein_coding retained_intron MGP_129S1SvImJ_T0044547.1 MGP_129S1SvImJ_G0022847.1 mouse_genomes_project 16 43870813 43871590 + Ccdc80 protein_coding processed_transcript MGP_129S1SvImJ_T0044548.1 MGP_129S1SvImJ_G0022847.1 mouse_genomes_project 16 43870865 43872299 + Ccdc80 protein_coding processed_transcript MGP_129S1SvImJ_T0044549.1 MGP_129S1SvImJ_G0022847.1 mouse_genomes_project 16 43871001 43871755 + Ccdc80 protein_coding processed_transcript MGP_129S1SvImJ_T0044550.1 MGP_129S1SvImJ_G0022847.1 mouse_genomes_project 16 43871023 43907871 + MGP_129S1SvImJ_P0044550 Ccdc80 protein_coding protein_coding MGP_129S1SvImJ_T0044551.1 MGP_129S1SvImJ_G0022847.1 mouse_genomes_project 16 43871086 43872565 + Ccdc80 protein_coding processed_transcript MGP_129S1SvImJ_T0044552.1 MGP_129S1SvImJ_G0022847.1 mouse_genomes_project 16 43871447 43908130 + MGP_129S1SvImJ_P0044552 Ccdc80 protein_coding protein_coding MGP_129S1SvImJ_T0045017.1 MGP_129S1SvImJ_G0023020.1 mouse_genomes_project 16 90337117 90337709 - MGP_129S1SvImJ_P0045017 Krtap8-1 protein_coding protein_coding MGP_129S1SvImJ_T0044798.1 MGP_129S1SvImJ_G0022924.1 mouse_genomes_project 16 58537037 58537964 - MGP_129S1SvImJ_P0044798 protein_coding protein_coding MGP_129S1SvImJ_T0003673.1 MGP_129S1SvImJ_G0003324.1 mouse_genomes_project 16 8583793 8587482 - Gm4279 antisense antisense MGP_129S1SvImJ_T0010143.1 MGP_129S1SvImJ_G0008259.1 mouse_genomes_project 16 18672668 18672722 - Mir7680 miRNA miRNA MGP_129S1SvImJ_T0044997.1 MGP_129S1SvImJ_G0023002.1 mouse_genomes_project 16 89745210 89745378 - MGP_129S1SvImJ_P0044997 Krtap19-9a protein_coding protein_coding MGP_129S1SvImJ_T0043968.1 MGP_129S1SvImJ_G0022706.1 mouse_genomes_project 16 27417884 27494324 + MGP_129S1SvImJ_P0043968 Opa1 protein_coding protein_coding MGP_129S1SvImJ_T0043969.1 MGP_129S1SvImJ_G0022706.1 mouse_genomes_project 16 27417928 27453178 + Opa1 protein_coding retained_intron MGP_129S1SvImJ_T0043970.1 MGP_129S1SvImJ_G0022706.1 mouse_genomes_project 16 27417930 27468791 + MGP_129S1SvImJ_P0043970 Opa1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043971.1 MGP_129S1SvImJ_G0022706.1 mouse_genomes_project 16 27417930 27487310 + MGP_129S1SvImJ_P0043971 Opa1 protein_coding protein_coding MGP_129S1SvImJ_T0043972.1 MGP_129S1SvImJ_G0022706.1 mouse_genomes_project 16 27417930 27491283 + MGP_129S1SvImJ_P0043972 Opa1 protein_coding protein_coding MGP_129S1SvImJ_T0043973.1 MGP_129S1SvImJ_G0022706.1 mouse_genomes_project 16 27417942 27491286 + Opa1 protein_coding retained_intron MGP_129S1SvImJ_T0043974.1 MGP_129S1SvImJ_G0022706.1 mouse_genomes_project 16 27424502 27449461 + MGP_129S1SvImJ_P0043974 Opa1 protein_coding protein_coding MGP_129S1SvImJ_T0043975.1 MGP_129S1SvImJ_G0022706.1 mouse_genomes_project 16 27455178 27457264 + Opa1 protein_coding retained_intron MGP_129S1SvImJ_T0044929.1 MGP_129S1SvImJ_G0022970.1 mouse_genomes_project 16 85418209 85447863 + MGP_129S1SvImJ_P0044929 Gabpa protein_coding protein_coding MGP_129S1SvImJ_T0044930.1 MGP_129S1SvImJ_G0022970.1 mouse_genomes_project 16 85418408 85450209 + MGP_129S1SvImJ_P0044930 Gabpa protein_coding protein_coding MGP_129S1SvImJ_T0044931.1 MGP_129S1SvImJ_G0022970.1 mouse_genomes_project 16 85437178 85446977 + Gabpa protein_coding processed_transcript MGP_129S1SvImJ_T0044932.1 MGP_129S1SvImJ_G0022970.1 mouse_genomes_project 16 85442587 85444126 + Gabpa protein_coding retained_intron MGP_129S1SvImJ_T0044933.1 MGP_129S1SvImJ_G0022970.1 mouse_genomes_project 16 85446592 85449013 + Gabpa protein_coding processed_transcript MGP_129S1SvImJ_T0000990.1 MGP_129S1SvImJ_G0000920.1 mouse_genomes_project 16 77532100 77535554 + TEC TEC MGP_129S1SvImJ_T0043976.1 MGP_129S1SvImJ_G0022707.1 mouse_genomes_project 16 27818308 27822119 - MGP_129S1SvImJ_P0043976 Gm1968 protein_coding protein_coding MGP_129S1SvImJ_T0045002.1 MGP_129S1SvImJ_G0023007.1 mouse_genomes_project 16 89857224 89857812 + MGP_129S1SvImJ_P0045002 protein_coding protein_coding MGP_129S1SvImJ_T0003677.1 MGP_129S1SvImJ_G0003327.1 mouse_genomes_project 16 11364211 11366385 + Gm15868 antisense antisense MGP_129S1SvImJ_T0101639.1 MGP_129S1SvImJ_G0039673.1 mouse_genomes_project 16 12529080 12530508 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0043207.1 MGP_129S1SvImJ_G0022529.1 mouse_genomes_project 16 10065499 10101868 + MGP_129S1SvImJ_P0043207 Ercc4 protein_coding protein_coding MGP_129S1SvImJ_T0043208.1 MGP_129S1SvImJ_G0022529.1 mouse_genomes_project 16 10065732 10082823 + Ercc4 protein_coding retained_intron MGP_129S1SvImJ_T0043209.1 MGP_129S1SvImJ_G0022529.1 mouse_genomes_project 16 10065750 10086604 + MGP_129S1SvImJ_P0043209 Ercc4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043210.1 MGP_129S1SvImJ_G0022529.1 mouse_genomes_project 16 10068093 10103751 + MGP_129S1SvImJ_P0043210 Ercc4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043211.1 MGP_129S1SvImJ_G0022529.1 mouse_genomes_project 16 10091362 10097286 + Ercc4 protein_coding processed_transcript MGP_129S1SvImJ_T0044828.1 MGP_129S1SvImJ_G0022935.1 mouse_genomes_project 16 62189359 62252629 - MGP_129S1SvImJ_P0044828 Arl13b protein_coding protein_coding MGP_129S1SvImJ_T0044829.1 MGP_129S1SvImJ_G0022935.1 mouse_genomes_project 16 62193131 62201790 - Arl13b protein_coding processed_transcript MGP_129S1SvImJ_T0044831.1 MGP_129S1SvImJ_G0022935.1 mouse_genomes_project 16 62231214 62252629 - Arl13b protein_coding retained_intron MGP_129S1SvImJ_T0043895.1 MGP_129S1SvImJ_G0022680.1 mouse_genomes_project 16 20712637 20724108 + MGP_129S1SvImJ_P0043895 Adipoq protein_coding protein_coding MGP_129S1SvImJ_T0043896.1 MGP_129S1SvImJ_G0022680.1 mouse_genomes_project 16 20712747 20723372 + MGP_129S1SvImJ_P0043896 Adipoq protein_coding protein_coding MGP_129S1SvImJ_T0102275.1 MGP_129S1SvImJ_G0040109.1 mouse_genomes_project 16 58232647 58234541 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0010172.1 MGP_129S1SvImJ_G0008288.1 mouse_genomes_project 16 75781596 75781708 + Gm22923 miRNA miRNA MGP_129S1SvImJ_T0006831.1 MGP_129S1SvImJ_G0005635.1 mouse_genomes_project 16 1454332 1458870 - Gm16861 lincRNA lincRNA MGP_129S1SvImJ_T0042931.1 MGP_129S1SvImJ_G0022459.1 mouse_genomes_project 16 495059 497374 + MGP_129S1SvImJ_P0042931 Dnase1 protein_coding protein_coding MGP_129S1SvImJ_T0042932.1 MGP_129S1SvImJ_G0022459.1 mouse_genomes_project 16 495087 498142 + MGP_129S1SvImJ_P0042932 Dnase1 protein_coding protein_coding MGP_129S1SvImJ_T0042933.1 MGP_129S1SvImJ_G0022459.1 mouse_genomes_project 16 495090 496139 + MGP_129S1SvImJ_P0042933 Dnase1 protein_coding protein_coding MGP_129S1SvImJ_T0042934.1 MGP_129S1SvImJ_G0022459.1 mouse_genomes_project 16 495148 498142 + MGP_129S1SvImJ_P0042934 Dnase1 protein_coding protein_coding MGP_129S1SvImJ_T0042935.1 MGP_129S1SvImJ_G0022459.1 mouse_genomes_project 16 495215 498141 + Dnase1 protein_coding retained_intron MGP_129S1SvImJ_T0042936.1 MGP_129S1SvImJ_G0022459.1 mouse_genomes_project 16 495218 498142 + Dnase1 protein_coding retained_intron MGP_129S1SvImJ_T0042937.1 MGP_129S1SvImJ_G0022459.1 mouse_genomes_project 16 495272 497993 + MGP_129S1SvImJ_P0042937 Dnase1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042938.1 MGP_129S1SvImJ_G0022459.1 mouse_genomes_project 16 495393 496378 + Dnase1 protein_coding retained_intron MGP_129S1SvImJ_T0042939.1 MGP_129S1SvImJ_G0022459.1 mouse_genomes_project 16 495421 497457 + Dnase1 protein_coding retained_intron MGP_129S1SvImJ_T0042940.1 MGP_129S1SvImJ_G0022459.1 mouse_genomes_project 16 496339 496989 + Dnase1 protein_coding retained_intron MGP_129S1SvImJ_T0042941.1 MGP_129S1SvImJ_G0022459.1 mouse_genomes_project 16 497247 498142 + MGP_129S1SvImJ_P0042941 Dnase1 protein_coding protein_coding MGP_129S1SvImJ_T0043593.1 MGP_129S1SvImJ_G0022610.1 mouse_genomes_project 16 15632877 15639247 - MGP_129S1SvImJ_P0043593 Comt protein_coding protein_coding MGP_129S1SvImJ_T0043594.1 MGP_129S1SvImJ_G0022610.1 mouse_genomes_project 16 15633256 15652426 - MGP_129S1SvImJ_P0043594 Comt protein_coding protein_coding MGP_129S1SvImJ_T0043595.1 MGP_129S1SvImJ_G0022610.1 mouse_genomes_project 16 15633296 15651959 - MGP_129S1SvImJ_P0043595 Comt protein_coding protein_coding MGP_129S1SvImJ_T0043596.1 MGP_129S1SvImJ_G0022610.1 mouse_genomes_project 16 15636515 15639247 - MGP_129S1SvImJ_P0043596 Comt protein_coding protein_coding MGP_129S1SvImJ_T0010124.1 MGP_129S1SvImJ_G0008240.1 mouse_genomes_project 16 7056964 7057036 + Gm22932 miRNA miRNA MGP_129S1SvImJ_T0043528.1 MGP_129S1SvImJ_G0022597.1 mouse_genomes_project 16 15087586 15100589 - MGP_129S1SvImJ_P0043528 Dgcr14 protein_coding protein_coding MGP_129S1SvImJ_T0045300.1 MGP_129S1SvImJ_G0023076.1 mouse_genomes_project 16 96661953 96850613 - MGP_129S1SvImJ_P0045300 Erg protein_coding protein_coding MGP_129S1SvImJ_T0045301.1 MGP_129S1SvImJ_G0023076.1 mouse_genomes_project 16 96661957 96772843 - MGP_129S1SvImJ_P0045301 Erg protein_coding protein_coding MGP_129S1SvImJ_T0045302.1 MGP_129S1SvImJ_G0023076.1 mouse_genomes_project 16 96662986 96907409 - MGP_129S1SvImJ_P0045302 Erg protein_coding protein_coding MGP_129S1SvImJ_T0045303.1 MGP_129S1SvImJ_G0023076.1 mouse_genomes_project 16 96662986 96850613 - MGP_129S1SvImJ_P0045303 Erg protein_coding protein_coding MGP_129S1SvImJ_T0045304.1 MGP_129S1SvImJ_G0023076.1 mouse_genomes_project 16 96663118 96772888 - MGP_129S1SvImJ_P0045304 Erg protein_coding protein_coding MGP_129S1SvImJ_T0045305.1 MGP_129S1SvImJ_G0023076.1 mouse_genomes_project 16 96663421 96843620 - MGP_129S1SvImJ_P0045305 Erg protein_coding protein_coding MGP_129S1SvImJ_T0045306.1 MGP_129S1SvImJ_G0023076.1 mouse_genomes_project 16 96663581 96772785 - MGP_129S1SvImJ_P0045306 Erg protein_coding protein_coding MGP_129S1SvImJ_T0045307.1 MGP_129S1SvImJ_G0023076.1 mouse_genomes_project 16 96663581 96772785 - MGP_129S1SvImJ_P0045307 Erg protein_coding protein_coding MGP_129S1SvImJ_T0045308.1 MGP_129S1SvImJ_G0023076.1 mouse_genomes_project 16 96663581 96850571 - MGP_129S1SvImJ_P0045308 Erg protein_coding protein_coding MGP_129S1SvImJ_T0006874.1 MGP_129S1SvImJ_G0005670.1 mouse_genomes_project 16 56318601 56326759 + Gm16892 lincRNA lincRNA MGP_129S1SvImJ_T0043550.1 MGP_129S1SvImJ_G0022602.1 mouse_genomes_project 16 15332653 15358980 + MGP_129S1SvImJ_P0043550 Rtn4r protein_coding protein_coding MGP_129S1SvImJ_T0043059.1 MGP_129S1SvImJ_G0022490.1 mouse_genomes_project 16 3429751 4066589 + MGP_129S1SvImJ_P0043059 Rbfox1 protein_coding protein_coding MGP_129S1SvImJ_T0043060.1 MGP_129S1SvImJ_G0022490.1 mouse_genomes_project 16 3703632 4069281 + MGP_129S1SvImJ_P0043060 Rbfox1 protein_coding protein_coding MGP_129S1SvImJ_T0043061.1 MGP_129S1SvImJ_G0022490.1 mouse_genomes_project 16 3867202 4069285 + MGP_129S1SvImJ_P0043061 Rbfox1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0044583.1 MGP_129S1SvImJ_G0022855.1 mouse_genomes_project 16 44409018 44436261 - MGP_129S1SvImJ_P0044583 BC016579 protein_coding protein_coding MGP_129S1SvImJ_T0043262.1 MGP_129S1SvImJ_G0022541.1 mouse_genomes_project 16 11146732 11207897 - MGP_129S1SvImJ_P0043262 Marf1 protein_coding protein_coding MGP_129S1SvImJ_T0043908.1 MGP_129S1SvImJ_G0022686.1 mouse_genomes_project 16 21488503 21489767 - MGP_129S1SvImJ_P0043908 Sst protein_coding protein_coding MGP_129S1SvImJ_T0044378.1 MGP_129S1SvImJ_G0022807.1 mouse_genomes_project 16 36418522 36518236 + MGP_129S1SvImJ_P0044378 Gpr156 protein_coding protein_coding MGP_129S1SvImJ_T0013226.1 MGP_129S1SvImJ_G0011315.1 mouse_genomes_project 16 95868909 95869120 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0044100.1 MGP_129S1SvImJ_G0022741.1 mouse_genomes_project 16 30581680 30594435 + MGP_129S1SvImJ_P0044100 Zdhhc19 protein_coding protein_coding MGP_129S1SvImJ_T0044101.1 MGP_129S1SvImJ_G0022741.1 mouse_genomes_project 16 30586828 30657674 + Zdhhc19 protein_coding processed_transcript MGP_129S1SvImJ_T0044865.1 MGP_129S1SvImJ_G0022950.1 mouse_genomes_project 16 72564819 72961641 + MGP_129S1SvImJ_P0044865 Robo1 protein_coding protein_coding MGP_129S1SvImJ_T0043745.1 MGP_129S1SvImJ_G0022648.1 mouse_genomes_project 16 17949015 17956414 + MGP_129S1SvImJ_P0043745 Ece2 protein_coding protein_coding MGP_129S1SvImJ_T0043746.1 MGP_129S1SvImJ_G0022648.1 mouse_genomes_project 16 17949023 17984920 + MGP_129S1SvImJ_P0043746 Ece2 protein_coding protein_coding MGP_129S1SvImJ_T0043747.1 MGP_129S1SvImJ_G0022648.1 mouse_genomes_project 16 17949023 17956276 + MGP_129S1SvImJ_P0043747 Ece2 protein_coding protein_coding MGP_129S1SvImJ_T0043748.1 MGP_129S1SvImJ_G0022648.1 mouse_genomes_project 16 17949032 17984925 + MGP_129S1SvImJ_P0043748 Ece2 protein_coding protein_coding MGP_129S1SvImJ_T0043749.1 MGP_129S1SvImJ_G0022648.1 mouse_genomes_project 16 17949216 17984920 + MGP_129S1SvImJ_P0043749 Ece2 protein_coding protein_coding MGP_129S1SvImJ_T0043751.1 MGP_129S1SvImJ_G0022648.1 mouse_genomes_project 16 17968106 17984920 + MGP_129S1SvImJ_P0043751 Ece2 protein_coding protein_coding MGP_129S1SvImJ_T0043752.1 MGP_129S1SvImJ_G0022648.1 mouse_genomes_project 16 17968123 17982039 + Ece2 protein_coding retained_intron MGP_129S1SvImJ_T0043753.1 MGP_129S1SvImJ_G0022648.1 mouse_genomes_project 16 17968123 17985481 + MGP_129S1SvImJ_P0043753 Ece2 protein_coding protein_coding MGP_129S1SvImJ_T0043754.1 MGP_129S1SvImJ_G0022648.1 mouse_genomes_project 16 17968129 17984920 + MGP_129S1SvImJ_P0043754 Ece2 protein_coding protein_coding MGP_129S1SvImJ_T0043755.1 MGP_129S1SvImJ_G0022648.1 mouse_genomes_project 16 17969423 17976428 + Ece2 protein_coding retained_intron MGP_129S1SvImJ_T0043756.1 MGP_129S1SvImJ_G0022648.1 mouse_genomes_project 16 17971148 17985490 + MGP_129S1SvImJ_P0043756 Ece2 protein_coding protein_coding MGP_129S1SvImJ_T0043867.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20668366 20675800 + MGP_129S1SvImJ_P0043867 Eif4a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043868.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20668369 20673925 + MGP_129S1SvImJ_P0043868 Eif4a2 protein_coding protein_coding MGP_129S1SvImJ_T0043869.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20668370 20669913 + Eif4a2 protein_coding retained_intron MGP_129S1SvImJ_T0043870.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20668370 20673798 + MGP_129S1SvImJ_P0043870 Eif4a2 protein_coding protein_coding MGP_129S1SvImJ_T0043871.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20668371 20669706 + Eif4a2 protein_coding retained_intron MGP_129S1SvImJ_T0043872.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20668371 20669817 + Eif4a2 protein_coding retained_intron MGP_129S1SvImJ_T0043873.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20668371 20675590 + MGP_129S1SvImJ_P0043873 Eif4a2 protein_coding protein_coding MGP_129S1SvImJ_T0043874.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20668371 20675610 + MGP_129S1SvImJ_P0043874 Eif4a2 protein_coding protein_coding MGP_129S1SvImJ_T0043875.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20668379 20671773 + Eif4a2 protein_coding retained_intron MGP_129S1SvImJ_T0043876.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20668383 20671322 + Eif4a2 protein_coding retained_intron MGP_129S1SvImJ_T0043877.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20668385 20670931 + Eif4a2 protein_coding retained_intron MGP_129S1SvImJ_T0043878.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20668389 20669786 + Eif4a2 protein_coding retained_intron MGP_129S1SvImJ_T0043879.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20668389 20675594 + MGP_129S1SvImJ_P0043879 Eif4a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043880.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20668390 20675611 + MGP_129S1SvImJ_P0043880 Eif4a2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043881.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20668391 20670860 + Eif4a2 protein_coding retained_intron MGP_129S1SvImJ_T0043882.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20668529 20671263 + Eif4a2 protein_coding processed_transcript MGP_129S1SvImJ_T0043883.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20669194 20670083 + Eif4a2 protein_coding retained_intron MGP_129S1SvImJ_T0043884.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20669843 20671179 + Eif4a2 protein_coding retained_intron MGP_129S1SvImJ_T0043885.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20670588 20673023 + Eif4a2 protein_coding retained_intron MGP_129S1SvImJ_T0043886.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20670657 20671410 + Eif4a2 protein_coding retained_intron MGP_129S1SvImJ_T0043887.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20670845 20672240 + Eif4a2 protein_coding retained_intron MGP_129S1SvImJ_T0043888.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20671284 20672554 + Eif4a2 protein_coding retained_intron MGP_129S1SvImJ_T0043889.1 MGP_129S1SvImJ_G0022678.1 mouse_genomes_project 16 20671311 20672947 + Eif4a2 protein_coding retained_intron MGP_129S1SvImJ_T0013153.1 MGP_129S1SvImJ_G0011242.1 mouse_genomes_project 16 12499647 12500700 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0044377.1 MGP_129S1SvImJ_G0022806.1 mouse_genomes_project 16 36357163 36388568 + MGP_129S1SvImJ_P0044377 Lrrc58 protein_coding protein_coding MGP_129S1SvImJ_T0044818.1 MGP_129S1SvImJ_G0022933.1 mouse_genomes_project 16 58948920 59904989 - MGP_129S1SvImJ_P0044818 Epha6 protein_coding protein_coding MGP_129S1SvImJ_T0044819.1 MGP_129S1SvImJ_G0022933.1 mouse_genomes_project 16 58968165 59334632 - MGP_129S1SvImJ_P0044819 Epha6 protein_coding protein_coding MGP_129S1SvImJ_T0044820.1 MGP_129S1SvImJ_G0022933.1 mouse_genomes_project 16 59735268 59905272 - Epha6 protein_coding retained_intron MGP_129S1SvImJ_T0044821.1 MGP_129S1SvImJ_G0022933.1 mouse_genomes_project 16 59783026 59904960 - Epha6 protein_coding processed_transcript MGP_129S1SvImJ_T0013184.1 MGP_129S1SvImJ_G0011273.1 mouse_genomes_project 16 34607729 34608222 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0043984.1 MGP_129S1SvImJ_G0022712.1 mouse_genomes_project 16 28201891 28286661 - MGP_129S1SvImJ_P0043984 Atp13a3 protein_coding protein_coding MGP_129S1SvImJ_T0043985.1 MGP_129S1SvImJ_G0022712.1 mouse_genomes_project 16 28201891 28286661 - MGP_129S1SvImJ_P0043985 Atp13a3 protein_coding protein_coding MGP_129S1SvImJ_T0043986.1 MGP_129S1SvImJ_G0022712.1 mouse_genomes_project 16 28250535 28254709 - Atp13a3 protein_coding retained_intron MGP_129S1SvImJ_T0043987.1 MGP_129S1SvImJ_G0022712.1 mouse_genomes_project 16 28259127 28286616 - Atp13a3 protein_coding retained_intron MGP_129S1SvImJ_T0043988.1 MGP_129S1SvImJ_G0022712.1 mouse_genomes_project 16 28284018 28286968 - Atp13a3 protein_coding retained_intron MGP_129S1SvImJ_T0045008.1 MGP_129S1SvImJ_G0023012.1 mouse_genomes_project 16 89996782 89997271 + MGP_129S1SvImJ_P0045008 Gm6358 protein_coding protein_coding MGP_129S1SvImJ_T0045009.1 MGP_129S1SvImJ_G0023012.1 mouse_genomes_project 16 89996875 89997031 + MGP_129S1SvImJ_P0045009 Gm6358 protein_coding protein_coding MGP_129S1SvImJ_T0099499.1 MGP_129S1SvImJ_G0037566.1 mouse_genomes_project 16 15575419 15575567 + Gm26170 snRNA snRNA MGP_129S1SvImJ_T0017518.1 MGP_129S1SvImJ_G0015313.1 mouse_genomes_project 16 15642434 15647560 + Gm15764 processed_transcript antisense MGP_129S1SvImJ_T0017519.1 MGP_129S1SvImJ_G0015313.1 mouse_genomes_project 16 15642637 15646929 + Gm15764 processed_transcript retained_intron MGP_129S1SvImJ_T0013201.1 MGP_129S1SvImJ_G0011290.1 mouse_genomes_project 16 47056738 47057338 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0043145.1 MGP_129S1SvImJ_G0022515.1 mouse_genomes_project 16 7623688 7624249 - MGP_129S1SvImJ_P0043145 Prm1 protein_coding protein_coding MGP_129S1SvImJ_T0044908.1 MGP_129S1SvImJ_G0022965.1 mouse_genomes_project 16 79127237 79283947 - MGP_129S1SvImJ_P0044908 Tmprss15 protein_coding protein_coding MGP_129S1SvImJ_T0044909.1 MGP_129S1SvImJ_G0022965.1 mouse_genomes_project 16 79127693 79283952 - MGP_129S1SvImJ_P0044909 Tmprss15 protein_coding protein_coding MGP_129S1SvImJ_T0099489.1 MGP_129S1SvImJ_G0037556.1 mouse_genomes_project 16 1591129 1591237 - Gm23483 snRNA snRNA MGP_129S1SvImJ_T0043646.1 MGP_129S1SvImJ_G0022621.1 mouse_genomes_project 16 16101898 16224337 + MGP_129S1SvImJ_P0043646 Gm28539 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044607.1 MGP_129S1SvImJ_G0022861.1 mouse_genomes_project 16 44848085 44931705 - MGP_129S1SvImJ_P0044607 Cd96 protein_coding protein_coding MGP_129S1SvImJ_T0044986.1 MGP_129S1SvImJ_G0022993.1 mouse_genomes_project 16 89595003 89596128 - MGP_129S1SvImJ_P0044986 2310057N15Rik protein_coding protein_coding MGP_129S1SvImJ_T0100795.1 MGP_129S1SvImJ_G0038862.1 mouse_genomes_project 16 53667321 53667446 + Gm23180 snoRNA snoRNA MGP_129S1SvImJ_T0013146.1 MGP_129S1SvImJ_G0011235.1 mouse_genomes_project 16 8383376 8384862 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0043915.1 MGP_129S1SvImJ_G0022690.1 mouse_genomes_project 16 22964363 23115525 + MGP_129S1SvImJ_P0043915 Tprg protein_coding protein_coding MGP_129S1SvImJ_T0043916.1 MGP_129S1SvImJ_G0022690.1 mouse_genomes_project 16 22964367 22999130 + Tprg protein_coding retained_intron MGP_129S1SvImJ_T0043551.1 MGP_129S1SvImJ_G0022603.1 mouse_genomes_project 16 15425439 15426583 + MGP_129S1SvImJ_P0043551 Ccdc188 protein_coding protein_coding MGP_129S1SvImJ_T0044780.1 MGP_129S1SvImJ_G0022914.1 mouse_genomes_project 16 58141169 58142273 - MGP_129S1SvImJ_P0044780 Olfr181 protein_coding protein_coding MGP_129S1SvImJ_T0044781.1 MGP_129S1SvImJ_G0022914.1 mouse_genomes_project 16 58141169 58144255 - MGP_129S1SvImJ_P0044781 Olfr181 protein_coding protein_coding MGP_129S1SvImJ_T0044782.1 MGP_129S1SvImJ_G0022914.1 mouse_genomes_project 16 58141797 58144255 - MGP_129S1SvImJ_P0044782 Olfr181 protein_coding protein_coding MGP_129S1SvImJ_T0044783.1 MGP_129S1SvImJ_G0022914.1 mouse_genomes_project 16 58141945 58144219 - MGP_129S1SvImJ_P0044783 Olfr181 protein_coding protein_coding MGP_129S1SvImJ_T0017534.1 MGP_129S1SvImJ_G0015323.1 mouse_genomes_project 16 66234626 66242137 + 1700010K23Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0043218.1 MGP_129S1SvImJ_G0022533.1 mouse_genomes_project 16 10652165 10658642 + MGP_129S1SvImJ_P0043218 3110001I22Rik protein_coding protein_coding MGP_129S1SvImJ_T0043648.1 MGP_129S1SvImJ_G0022622.1 mouse_genomes_project 16 16138434 16143184 - MGP_129S1SvImJ_P0043648 Mrpl40 protein_coding protein_coding MGP_129S1SvImJ_T0043649.1 MGP_129S1SvImJ_G0022622.1 mouse_genomes_project 16 16138642 16142956 - MGP_129S1SvImJ_P0043649 Mrpl40 protein_coding protein_coding MGP_129S1SvImJ_T0042882.1 MGP_129S1SvImJ_G0022448.1 mouse_genomes_project 16 149781 161881 - MGP_129S1SvImJ_P0042882 Mefv protein_coding protein_coding MGP_129S1SvImJ_T0042883.1 MGP_129S1SvImJ_G0022448.1 mouse_genomes_project 16 149781 161881 - MGP_129S1SvImJ_P0042883 Mefv protein_coding protein_coding MGP_129S1SvImJ_T0000998.1 MGP_129S1SvImJ_G0000928.1 mouse_genomes_project 16 77786467 77787375 + TEC TEC MGP_129S1SvImJ_T0010140.1 MGP_129S1SvImJ_G0008256.1 mouse_genomes_project 16 16604932 16605042 + Gm23612 miRNA miRNA MGP_129S1SvImJ_T0043711.1 MGP_129S1SvImJ_G0022642.1 mouse_genomes_project 16 17835332 17848048 + MGP_129S1SvImJ_P0043711 Eif2b5 protein_coding protein_coding MGP_129S1SvImJ_T0043712.1 MGP_129S1SvImJ_G0022642.1 mouse_genomes_project 16 17842864 17847416 + MGP_129S1SvImJ_P0043712 Eif2b5 protein_coding protein_coding MGP_129S1SvImJ_T0099510.1 MGP_129S1SvImJ_G0037577.1 mouse_genomes_project 16 34537284 34537391 - Gm22885 snRNA snRNA MGP_129S1SvImJ_T0045379.1 MGP_129S1SvImJ_G0023094.1 mouse_genomes_project 16 99241619 99306567 - MGP_129S1SvImJ_P0045379 Prdm15 protein_coding protein_coding MGP_129S1SvImJ_T0045380.1 MGP_129S1SvImJ_G0023094.1 mouse_genomes_project 16 99241672 99307190 - MGP_129S1SvImJ_P0045380 Prdm15 protein_coding protein_coding MGP_129S1SvImJ_T0045381.1 MGP_129S1SvImJ_G0023094.1 mouse_genomes_project 16 99241674 99307140 - MGP_129S1SvImJ_P0045381 Prdm15 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0045382.1 MGP_129S1SvImJ_G0023094.1 mouse_genomes_project 16 99242029 99307123 - MGP_129S1SvImJ_P0045382 Prdm15 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045383.1 MGP_129S1SvImJ_G0023094.1 mouse_genomes_project 16 99242482 99250462 - Prdm15 protein_coding retained_intron MGP_129S1SvImJ_T0045384.1 MGP_129S1SvImJ_G0023094.1 mouse_genomes_project 16 99244668 99255634 - Prdm15 protein_coding processed_transcript MGP_129S1SvImJ_T0045385.1 MGP_129S1SvImJ_G0023094.1 mouse_genomes_project 16 99245881 99248079 - Prdm15 protein_coding retained_intron MGP_129S1SvImJ_T0045386.1 MGP_129S1SvImJ_G0023094.1 mouse_genomes_project 16 99273725 99284662 - Prdm15 protein_coding retained_intron MGP_129S1SvImJ_T0045387.1 MGP_129S1SvImJ_G0023094.1 mouse_genomes_project 16 99290275 99294877 - Prdm15 protein_coding retained_intron MGP_129S1SvImJ_T0045388.1 MGP_129S1SvImJ_G0023094.1 mouse_genomes_project 16 99290693 99303794 - MGP_129S1SvImJ_P0045388 Prdm15 protein_coding protein_coding MGP_129S1SvImJ_T0045389.1 MGP_129S1SvImJ_G0023094.1 mouse_genomes_project 16 99292590 99306567 - MGP_129S1SvImJ_P0045389 Prdm15 protein_coding protein_coding MGP_129S1SvImJ_T0043507.1 MGP_129S1SvImJ_G0022590.1 mouse_genomes_project 16 14940994 14953118 + MGP_129S1SvImJ_P0043507 Klhl22 protein_coding protein_coding MGP_129S1SvImJ_T0043508.1 MGP_129S1SvImJ_G0022590.1 mouse_genomes_project 16 14940997 14974529 + MGP_129S1SvImJ_P0043508 Klhl22 protein_coding protein_coding MGP_129S1SvImJ_T0043509.1 MGP_129S1SvImJ_G0022590.1 mouse_genomes_project 16 14941014 14953160 + MGP_129S1SvImJ_P0043509 Klhl22 protein_coding protein_coding MGP_129S1SvImJ_T0043510.1 MGP_129S1SvImJ_G0022590.1 mouse_genomes_project 16 14941039 14960431 + Klhl22 protein_coding retained_intron MGP_129S1SvImJ_T0043511.1 MGP_129S1SvImJ_G0022590.1 mouse_genomes_project 16 14941047 14974529 + MGP_129S1SvImJ_P0043511 Klhl22 protein_coding protein_coding MGP_129S1SvImJ_T0043512.1 MGP_129S1SvImJ_G0022590.1 mouse_genomes_project 16 14941731 14953111 + MGP_129S1SvImJ_P0043512 Klhl22 protein_coding protein_coding MGP_129S1SvImJ_T0043513.1 MGP_129S1SvImJ_G0022590.1 mouse_genomes_project 16 14944167 14974531 + MGP_129S1SvImJ_P0043513 Klhl22 protein_coding protein_coding MGP_129S1SvImJ_T0043514.1 MGP_129S1SvImJ_G0022590.1 mouse_genomes_project 16 14945450 14953135 + Klhl22 protein_coding retained_intron MGP_129S1SvImJ_T0003722.1 MGP_129S1SvImJ_G0003364.1 mouse_genomes_project 16 99454711 99457524 - C030010L15Rik antisense antisense MGP_129S1SvImJ_T0003723.1 MGP_129S1SvImJ_G0003364.1 mouse_genomes_project 16 99454773 99455254 - C030010L15Rik antisense antisense MGP_129S1SvImJ_T0006850.1 MGP_129S1SvImJ_G0005651.1 mouse_genomes_project 16 22732418 22741835 + A230028O05Rik lincRNA lincRNA MGP_129S1SvImJ_T0044584.1 MGP_129S1SvImJ_G0022856.1 mouse_genomes_project 16 44438459 44484952 - MGP_129S1SvImJ_P0044584 Tmprss7 protein_coding protein_coding MGP_129S1SvImJ_T0044585.1 MGP_129S1SvImJ_G0022856.1 mouse_genomes_project 16 44438461 44476579 - Tmprss7 protein_coding processed_transcript MGP_129S1SvImJ_T0044586.1 MGP_129S1SvImJ_G0022856.1 mouse_genomes_project 16 44438485 44480864 - Tmprss7 protein_coding processed_transcript MGP_129S1SvImJ_T0044587.1 MGP_129S1SvImJ_G0022856.1 mouse_genomes_project 16 44474593 44477697 - Tmprss7 protein_coding processed_transcript MGP_129S1SvImJ_T0044588.1 MGP_129S1SvImJ_G0022856.1 mouse_genomes_project 16 44474707 44477702 - Tmprss7 protein_coding retained_intron MGP_129S1SvImJ_T0044984.1 MGP_129S1SvImJ_G0022991.1 mouse_genomes_project 16 89570218 89571918 - MGP_129S1SvImJ_P0044984 protein_coding protein_coding MGP_129S1SvImJ_T0043989.1 MGP_129S1SvImJ_G0022713.1 mouse_genomes_project 16 28419634 28459034 - MGP_129S1SvImJ_P0043989 Tmem44 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0043990.1 MGP_129S1SvImJ_G0022713.1 mouse_genomes_project 16 28419641 28458481 - Tmem44 protein_coding retained_intron MGP_129S1SvImJ_T0043991.1 MGP_129S1SvImJ_G0022713.1 mouse_genomes_project 16 28419641 28459105 - MGP_129S1SvImJ_P0043991 Tmem44 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043992.1 MGP_129S1SvImJ_G0022713.1 mouse_genomes_project 16 28421477 28459113 - MGP_129S1SvImJ_P0043992 Tmem44 protein_coding protein_coding MGP_129S1SvImJ_T0043993.1 MGP_129S1SvImJ_G0022713.1 mouse_genomes_project 16 28421479 28459113 - MGP_129S1SvImJ_P0043993 Tmem44 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043994.1 MGP_129S1SvImJ_G0022713.1 mouse_genomes_project 16 28421756 28448721 - MGP_129S1SvImJ_P0043994 Tmem44 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043995.1 MGP_129S1SvImJ_G0022713.1 mouse_genomes_project 16 28425300 28459074 - Tmem44 protein_coding retained_intron MGP_129S1SvImJ_T0043996.1 MGP_129S1SvImJ_G0022713.1 mouse_genomes_project 16 28425681 28459377 - Tmem44 protein_coding retained_intron MGP_129S1SvImJ_T0043997.1 MGP_129S1SvImJ_G0022713.1 mouse_genomes_project 16 28451527 28459063 - Tmem44 protein_coding processed_transcript MGP_129S1SvImJ_T0043104.1 MGP_129S1SvImJ_G0022502.1 mouse_genomes_project 16 6940248 6944642 + MGP_129S1SvImJ_P0043104 Rpl39l protein_coding protein_coding MGP_129S1SvImJ_T0043105.1 MGP_129S1SvImJ_G0022502.1 mouse_genomes_project 16 6940250 6944923 + MGP_129S1SvImJ_P0043105 Rpl39l protein_coding protein_coding MGP_129S1SvImJ_T0043829.1 MGP_129S1SvImJ_G0022665.1 mouse_genomes_project 16 19474584 19516404 + MGP_129S1SvImJ_P0043829 Senp2 protein_coding protein_coding MGP_129S1SvImJ_T0042897.1 MGP_129S1SvImJ_G0022453.1 mouse_genomes_project 16 312931 343429 + MGP_129S1SvImJ_P0042897 Naa60 protein_coding protein_coding MGP_129S1SvImJ_T0042899.1 MGP_129S1SvImJ_G0022453.1 mouse_genomes_project 16 327613 347391 + MGP_129S1SvImJ_P0042899 Naa60 protein_coding protein_coding MGP_129S1SvImJ_T0042900.1 MGP_129S1SvImJ_G0022453.1 mouse_genomes_project 16 327625 339966 + MGP_129S1SvImJ_P0042900 Naa60 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042901.1 MGP_129S1SvImJ_G0022453.1 mouse_genomes_project 16 327640 346367 + MGP_129S1SvImJ_P0042901 Naa60 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042902.1 MGP_129S1SvImJ_G0022453.1 mouse_genomes_project 16 327643 339997 + MGP_129S1SvImJ_P0042902 Naa60 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042903.1 MGP_129S1SvImJ_G0022453.1 mouse_genomes_project 16 327670 343018 + Naa60 protein_coding retained_intron MGP_129S1SvImJ_T0042904.1 MGP_129S1SvImJ_G0022453.1 mouse_genomes_project 16 336992 344432 + MGP_129S1SvImJ_P0042904 Naa60 protein_coding protein_coding MGP_129S1SvImJ_T0042905.1 MGP_129S1SvImJ_G0022453.1 mouse_genomes_project 16 336992 344557 + MGP_129S1SvImJ_P0042905 Naa60 protein_coding protein_coding MGP_129S1SvImJ_T0043515.1 MGP_129S1SvImJ_G0022591.1 mouse_genomes_project 16 14978430 14990686 + MGP_129S1SvImJ_P0043515 Scarf2 protein_coding protein_coding MGP_129S1SvImJ_T0044431.1 MGP_129S1SvImJ_G0022823.1 mouse_genomes_project 16 37357270 37377010 - MGP_129S1SvImJ_P0044431 4930435E12Rik protein_coding protein_coding MGP_129S1SvImJ_T0044432.1 MGP_129S1SvImJ_G0022823.1 mouse_genomes_project 16 37372043 37376992 - 4930435E12Rik protein_coding retained_intron MGP_129S1SvImJ_T0045377.1 MGP_129S1SvImJ_G0023092.1 mouse_genomes_project 16 99005706 99060184 - MGP_129S1SvImJ_P0045377 Tmprss2 protein_coding protein_coding MGP_129S1SvImJ_T0044433.1 MGP_129S1SvImJ_G0022824.1 mouse_genomes_project 16 37448162 37583624 + MGP_129S1SvImJ_P0044433 Igsf11 protein_coding protein_coding MGP_129S1SvImJ_T0043665.1 MGP_129S1SvImJ_G0022630.1 mouse_genomes_project 16 16882752 16910509 - MGP_129S1SvImJ_P0043665 protein_coding protein_coding MGP_129S1SvImJ_T0100813.1 MGP_129S1SvImJ_G0038880.1 mouse_genomes_project 16 88507658 88507746 - Gm23994 snoRNA snoRNA MGP_129S1SvImJ_T0100794.1 MGP_129S1SvImJ_G0038861.1 mouse_genomes_project 16 53394961 53395093 + Gm25853 snoRNA snoRNA MGP_129S1SvImJ_T0045010.1 MGP_129S1SvImJ_G0023013.1 mouse_genomes_project 16 90002481 90002940 + MGP_129S1SvImJ_P0045010 Gm10061 protein_coding protein_coding MGP_129S1SvImJ_T0000138.1 MGP_129S1SvImJ_G0000106.1 mouse_genomes_project 16 16537373 16539053 - MGP_129S1SvImJ_P0000138 Iglv2 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0000139.1 MGP_129S1SvImJ_G0000106.1 mouse_genomes_project 16 16537373 16539068 - MGP_129S1SvImJ_P0000139 Iglv2 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0010177.1 MGP_129S1SvImJ_G0008293.1 mouse_genomes_project 16 85287255 85287320 + Mir155 miRNA miRNA MGP_129S1SvImJ_T0043942.1 MGP_129S1SvImJ_G0022700.1 mouse_genomes_project 16 25162772 25221236 + MGP_129S1SvImJ_P0043942 Ccdc50 protein_coding protein_coding MGP_129S1SvImJ_T0043943.1 MGP_129S1SvImJ_G0022700.1 mouse_genomes_project 16 25162883 25215407 + MGP_129S1SvImJ_P0043943 Ccdc50 protein_coding protein_coding MGP_129S1SvImJ_T0043944.1 MGP_129S1SvImJ_G0022700.1 mouse_genomes_project 16 25162883 25208714 + MGP_129S1SvImJ_P0043944 Ccdc50 protein_coding protein_coding MGP_129S1SvImJ_T0043945.1 MGP_129S1SvImJ_G0022700.1 mouse_genomes_project 16 25163839 25207394 + MGP_129S1SvImJ_P0043945 Ccdc50 protein_coding protein_coding MGP_129S1SvImJ_T0043946.1 MGP_129S1SvImJ_G0022700.1 mouse_genomes_project 16 25163871 25164994 + Ccdc50 protein_coding processed_transcript MGP_129S1SvImJ_T0045181.1 MGP_129S1SvImJ_G0023052.1 mouse_genomes_project 16 93122166 93151313 + MGP_129S1SvImJ_P0045181 Slc5a3 protein_coding protein_coding MGP_129S1SvImJ_T0045182.1 MGP_129S1SvImJ_G0023052.1 mouse_genomes_project 16 93141909 93147647 + MGP_129S1SvImJ_P0045182 Slc5a3 protein_coding protein_coding MGP_129S1SvImJ_T0044972.1 MGP_129S1SvImJ_G0022982.1 mouse_genomes_project 16 88647687 88814315 - MGP_129S1SvImJ_P0044972 Grik1 protein_coding protein_coding MGP_129S1SvImJ_T0044973.1 MGP_129S1SvImJ_G0022982.1 mouse_genomes_project 16 88647687 88841725 - MGP_129S1SvImJ_P0044973 Grik1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0044974.1 MGP_129S1SvImJ_G0022982.1 mouse_genomes_project 16 88647687 88814315 - MGP_129S1SvImJ_P0044974 Grik1 protein_coding protein_coding MGP_129S1SvImJ_T0044975.1 MGP_129S1SvImJ_G0022982.1 mouse_genomes_project 16 88665953 88814315 - MGP_129S1SvImJ_P0044975 Grik1 protein_coding protein_coding MGP_129S1SvImJ_T0044772.1 MGP_129S1SvImJ_G0022910.1 mouse_genomes_project 16 58040151 58058368 - MGP_129S1SvImJ_P0044772 Olfr175-ps1 protein_coding protein_coding MGP_129S1SvImJ_T0044123.1 MGP_129S1SvImJ_G0022744.1 mouse_genomes_project 16 30848354 30863300 + MGP_129S1SvImJ_P0044123 protein_coding protein_coding MGP_129S1SvImJ_T0044124.1 MGP_129S1SvImJ_G0022744.1 mouse_genomes_project 16 30848354 30897164 + MGP_129S1SvImJ_P0044124 protein_coding protein_coding MGP_129S1SvImJ_T0044125.1 MGP_129S1SvImJ_G0022744.1 mouse_genomes_project 16 30848665 30896999 + protein_coding processed_transcript MGP_129S1SvImJ_T0044126.1 MGP_129S1SvImJ_G0022744.1 mouse_genomes_project 16 30870372 30897164 + MGP_129S1SvImJ_P0044126 protein_coding protein_coding MGP_129S1SvImJ_T0044127.1 MGP_129S1SvImJ_G0022744.1 mouse_genomes_project 16 30890322 30897157 + protein_coding processed_transcript MGP_129S1SvImJ_T0044128.1 MGP_129S1SvImJ_G0022744.1 mouse_genomes_project 16 30890401 30891000 + protein_coding processed_transcript MGP_129S1SvImJ_T0044130.1 MGP_129S1SvImJ_G0022744.1 mouse_genomes_project 16 30891576 30892971 + protein_coding retained_intron MGP_129S1SvImJ_T0044131.1 MGP_129S1SvImJ_G0022744.1 mouse_genomes_project 16 30892661 30893174 + protein_coding retained_intron MGP_129S1SvImJ_T0098837.1 MGP_129S1SvImJ_G0036917.1 mouse_genomes_project 16 1284735 1286447 - Gm15835 sense_intronic sense_intronic MGP_129S1SvImJ_T0006854.1 MGP_129S1SvImJ_G0005655.1 mouse_genomes_project 16 28074488 28079713 + 1700025H01Rik lincRNA lincRNA MGP_129S1SvImJ_T0044684.1 MGP_129S1SvImJ_G0022885.1 mouse_genomes_project 16 55119802 55133896 - MGP_129S1SvImJ_P0044684 Pcnp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044685.1 MGP_129S1SvImJ_G0022885.1 mouse_genomes_project 16 55121096 55133886 - Pcnp protein_coding processed_transcript MGP_129S1SvImJ_T0044686.1 MGP_129S1SvImJ_G0022885.1 mouse_genomes_project 16 55121295 55133876 - MGP_129S1SvImJ_P0044686 Pcnp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044687.1 MGP_129S1SvImJ_G0022885.1 mouse_genomes_project 16 55121328 55133906 - Pcnp protein_coding processed_transcript MGP_129S1SvImJ_T0044688.1 MGP_129S1SvImJ_G0022885.1 mouse_genomes_project 16 55121483 55133866 - MGP_129S1SvImJ_P0044688 Pcnp protein_coding protein_coding MGP_129S1SvImJ_T0044689.1 MGP_129S1SvImJ_G0022885.1 mouse_genomes_project 16 55121483 55128866 - MGP_129S1SvImJ_P0044689 Pcnp protein_coding protein_coding MGP_129S1SvImJ_T0044690.1 MGP_129S1SvImJ_G0022885.1 mouse_genomes_project 16 55122423 55133896 - MGP_129S1SvImJ_P0044690 Pcnp protein_coding protein_coding MGP_129S1SvImJ_T0044195.1 MGP_129S1SvImJ_G0022758.1 mouse_genomes_project 16 32019820 32050555 + MGP_129S1SvImJ_P0044195 Muc13 protein_coding protein_coding MGP_129S1SvImJ_T0044196.1 MGP_129S1SvImJ_G0022758.1 mouse_genomes_project 16 32020150 32050562 + MGP_129S1SvImJ_P0044196 Muc13 protein_coding protein_coding MGP_129S1SvImJ_T0042958.1 MGP_129S1SvImJ_G0022463.1 mouse_genomes_project 16 959043 1003667 - MGP_129S1SvImJ_P0042958 Srl protein_coding protein_coding MGP_129S1SvImJ_T0042959.1 MGP_129S1SvImJ_G0022463.1 mouse_genomes_project 16 959055 1003667 - MGP_129S1SvImJ_P0042959 Srl protein_coding protein_coding MGP_129S1SvImJ_T0042960.1 MGP_129S1SvImJ_G0022463.1 mouse_genomes_project 16 966362 1027693 - Srl protein_coding processed_transcript MGP_129S1SvImJ_T0042961.1 MGP_129S1SvImJ_G0022463.1 mouse_genomes_project 16 972382 1003655 - Srl protein_coding retained_intron MGP_129S1SvImJ_T0044791.1 MGP_129S1SvImJ_G0022918.1 mouse_genomes_project 16 58304271 58306435 - MGP_129S1SvImJ_P0044791 Olfr190 protein_coding protein_coding MGP_129S1SvImJ_T0003711.1 MGP_129S1SvImJ_G0003355.1 mouse_genomes_project 16 59904506 59910697 + Gm9017 antisense antisense MGP_129S1SvImJ_T0003712.1 MGP_129S1SvImJ_G0003355.1 mouse_genomes_project 16 59905495 59910977 + Gm9017 antisense antisense MGP_129S1SvImJ_T0100798.1 MGP_129S1SvImJ_G0038865.1 mouse_genomes_project 16 57933452 57933581 - Gm26019 snoRNA snoRNA MGP_129S1SvImJ_T0013145.1 MGP_129S1SvImJ_G0011234.1 mouse_genomes_project 16 8049259 8051611 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0043300.1 MGP_129S1SvImJ_G0022555.1 mouse_genomes_project 16 13316933 13330760 + MGP_129S1SvImJ_P0043300 Pkp2 protein_coding protein_coding MGP_129S1SvImJ_T0043301.1 MGP_129S1SvImJ_G0022555.1 mouse_genomes_project 16 13316933 13352583 + MGP_129S1SvImJ_P0043301 Pkp2 protein_coding protein_coding MGP_129S1SvImJ_T0043302.1 MGP_129S1SvImJ_G0022555.1 mouse_genomes_project 16 13316933 13376721 + MGP_129S1SvImJ_P0043302 Pkp2 protein_coding protein_coding MGP_129S1SvImJ_T0044769.1 MGP_129S1SvImJ_G0022908.1 mouse_genomes_project 16 57982359 57989407 - MGP_129S1SvImJ_P0044769 protein_coding protein_coding MGP_129S1SvImJ_T0044771.1 MGP_129S1SvImJ_G0022908.1 mouse_genomes_project 16 57983029 57991709 - MGP_129S1SvImJ_P0044771 protein_coding protein_coding MGP_129S1SvImJ_T0013132.1 MGP_129S1SvImJ_G0011221.1 mouse_genomes_project 16 371017 371330 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0043291.1 MGP_129S1SvImJ_G0022549.1 mouse_genomes_project 16 11986980 12004690 + MGP_129S1SvImJ_P0043291 Efcab1 protein_coding protein_coding MGP_129S1SvImJ_T0010179.1 MGP_129S1SvImJ_G0008295.1 mouse_genomes_project 16 92544630 92544732 - Mir6367 miRNA miRNA MGP_129S1SvImJ_T0013174.1 MGP_129S1SvImJ_G0011263.1 mouse_genomes_project 16 21313001 21314588 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099495.1 MGP_129S1SvImJ_G0037562.1 mouse_genomes_project 16 14111354 14111449 - Gm22558 snRNA snRNA MGP_129S1SvImJ_T0013193.1 MGP_129S1SvImJ_G0011282.1 mouse_genomes_project 16 42005198 42007297 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006867.1 MGP_129S1SvImJ_G0005667.1 mouse_genomes_project 16 49657788 49671967 - Dubr lincRNA lincRNA MGP_129S1SvImJ_T0006868.1 MGP_129S1SvImJ_G0005667.1 mouse_genomes_project 16 49657793 49671873 - Dubr lincRNA lincRNA MGP_129S1SvImJ_T0006869.1 MGP_129S1SvImJ_G0005667.1 mouse_genomes_project 16 49665939 49671927 - Dubr lincRNA lincRNA MGP_129S1SvImJ_T0006870.1 MGP_129S1SvImJ_G0005667.1 mouse_genomes_project 16 49666626 49671878 - Dubr lincRNA lincRNA MGP_129S1SvImJ_T0044083.1 MGP_129S1SvImJ_G0022733.1 mouse_genomes_project 16 30300011 30309747 + Wdr53 protein_coding processed_transcript MGP_129S1SvImJ_T0044084.1 MGP_129S1SvImJ_G0022733.1 mouse_genomes_project 16 30300011 30310068 + MGP_129S1SvImJ_P0044084 Wdr53 protein_coding protein_coding MGP_129S1SvImJ_T0044085.1 MGP_129S1SvImJ_G0022733.1 mouse_genomes_project 16 30300037 30310077 + MGP_129S1SvImJ_P0044085 Wdr53 protein_coding protein_coding MGP_129S1SvImJ_T0044086.1 MGP_129S1SvImJ_G0022733.1 mouse_genomes_project 16 30300185 30304954 + Wdr53 protein_coding retained_intron MGP_129S1SvImJ_T0043801.1 MGP_129S1SvImJ_G0022656.1 mouse_genomes_project 16 18082935 18092193 + MGP_129S1SvImJ_P0043801 Chrd protein_coding protein_coding MGP_129S1SvImJ_T0043802.1 MGP_129S1SvImJ_G0022656.1 mouse_genomes_project 16 18082935 18087961 + MGP_129S1SvImJ_P0043802 Chrd protein_coding protein_coding MGP_129S1SvImJ_T0043803.1 MGP_129S1SvImJ_G0022656.1 mouse_genomes_project 16 18082935 18092193 + MGP_129S1SvImJ_P0043803 Chrd protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043804.1 MGP_129S1SvImJ_G0022656.1 mouse_genomes_project 16 18086014 18092191 + Chrd protein_coding retained_intron MGP_129S1SvImJ_T0010164.1 MGP_129S1SvImJ_G0008280.1 mouse_genomes_project 16 54559397 54559464 + Mir5118 miRNA miRNA MGP_129S1SvImJ_T0043613.1 MGP_129S1SvImJ_G0022612.1 mouse_genomes_project 16 15729221 15806674 + MGP_129S1SvImJ_P0043613 Gnb1l protein_coding protein_coding MGP_129S1SvImJ_T0043614.1 MGP_129S1SvImJ_G0022612.1 mouse_genomes_project 16 15729276 15792383 + MGP_129S1SvImJ_P0043614 Gnb1l protein_coding protein_coding MGP_129S1SvImJ_T0043615.1 MGP_129S1SvImJ_G0022612.1 mouse_genomes_project 16 15729331 15792567 + Gnb1l protein_coding processed_transcript MGP_129S1SvImJ_T0043616.1 MGP_129S1SvImJ_G0022612.1 mouse_genomes_project 16 15729339 15806622 + MGP_129S1SvImJ_P0043616 Gnb1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043617.1 MGP_129S1SvImJ_G0022612.1 mouse_genomes_project 16 15729339 15792433 + MGP_129S1SvImJ_P0043617 Gnb1l protein_coding protein_coding MGP_129S1SvImJ_T0043618.1 MGP_129S1SvImJ_G0022612.1 mouse_genomes_project 16 15729341 15806674 + MGP_129S1SvImJ_P0043618 Gnb1l protein_coding protein_coding MGP_129S1SvImJ_T0043619.1 MGP_129S1SvImJ_G0022612.1 mouse_genomes_project 16 15729341 15806674 + MGP_129S1SvImJ_P0043619 Gnb1l protein_coding protein_coding MGP_129S1SvImJ_T0043620.1 MGP_129S1SvImJ_G0022612.1 mouse_genomes_project 16 15729344 15792506 + Gnb1l protein_coding processed_transcript MGP_129S1SvImJ_T0043621.1 MGP_129S1SvImJ_G0022612.1 mouse_genomes_project 16 15729350 15784221 + MGP_129S1SvImJ_P0043621 Gnb1l protein_coding protein_coding MGP_129S1SvImJ_T0043623.1 MGP_129S1SvImJ_G0022612.1 mouse_genomes_project 16 15729355 15804533 + MGP_129S1SvImJ_P0043623 Gnb1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043624.1 MGP_129S1SvImJ_G0022612.1 mouse_genomes_project 16 15788738 15792579 + Gnb1l protein_coding processed_transcript MGP_129S1SvImJ_T0099498.1 MGP_129S1SvImJ_G0037565.1 mouse_genomes_project 16 14636393 14636460 - Gm22770 snRNA snRNA MGP_129S1SvImJ_T0017558.1 MGP_129S1SvImJ_G0015330.1 mouse_genomes_project 16 92719420 92750023 + Gm10785 processed_transcript processed_transcript MGP_129S1SvImJ_T0000986.1 MGP_129S1SvImJ_G0000917.1 mouse_genomes_project 16 77489984 77490636 + TEC TEC MGP_129S1SvImJ_T0043203.1 MGP_129S1SvImJ_G0022528.1 mouse_genomes_project 16 8890799 8902068 + Shisa9 protein_coding processed_transcript MGP_129S1SvImJ_T0043204.1 MGP_129S1SvImJ_G0022528.1 mouse_genomes_project 16 8891267 9196031 + MGP_129S1SvImJ_P0043204 Shisa9 protein_coding protein_coding MGP_129S1SvImJ_T0043205.1 MGP_129S1SvImJ_G0022528.1 mouse_genomes_project 16 8891267 9196984 + MGP_129S1SvImJ_P0043205 Shisa9 protein_coding protein_coding MGP_129S1SvImJ_T0043206.1 MGP_129S1SvImJ_G0022528.1 mouse_genomes_project 16 8891364 8896767 + Shisa9 protein_coding processed_transcript MGP_129S1SvImJ_T0043909.1 MGP_129S1SvImJ_G0022687.1 mouse_genomes_project 16 21531344 21538175 - MGP_129S1SvImJ_P0043909 Rtp2 protein_coding protein_coding MGP_129S1SvImJ_T0013176.1 MGP_129S1SvImJ_G0011265.1 mouse_genomes_project 16 25110378 25111212 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013154.1 MGP_129S1SvImJ_G0011243.1 mouse_genomes_project 16 12967278 12967561 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0045117.1 MGP_129S1SvImJ_G0023046.1 mouse_genomes_project 16 92675283 92709717 + MGP_129S1SvImJ_P0045117 Son protein_coding protein_coding MGP_129S1SvImJ_T0045118.1 MGP_129S1SvImJ_G0023046.1 mouse_genomes_project 16 92675656 92693480 + MGP_129S1SvImJ_P0045118 Son protein_coding protein_coding MGP_129S1SvImJ_T0045119.1 MGP_129S1SvImJ_G0023046.1 mouse_genomes_project 16 92675656 92709705 + MGP_129S1SvImJ_P0045119 Son protein_coding protein_coding MGP_129S1SvImJ_T0045120.1 MGP_129S1SvImJ_G0023046.1 mouse_genomes_project 16 92675656 92709705 + MGP_129S1SvImJ_P0045120 Son protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045121.1 MGP_129S1SvImJ_G0023046.1 mouse_genomes_project 16 92675657 92691805 + MGP_129S1SvImJ_P0045121 Son protein_coding protein_coding MGP_129S1SvImJ_T0045122.1 MGP_129S1SvImJ_G0023046.1 mouse_genomes_project 16 92675662 92709731 + MGP_129S1SvImJ_P0045122 Son protein_coding protein_coding MGP_129S1SvImJ_T0045123.1 MGP_129S1SvImJ_G0023046.1 mouse_genomes_project 16 92687714 92709702 + MGP_129S1SvImJ_P0045123 Son protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045124.1 MGP_129S1SvImJ_G0023046.1 mouse_genomes_project 16 92691991 92702649 + Son protein_coding processed_transcript MGP_129S1SvImJ_T0045125.1 MGP_129S1SvImJ_G0023046.1 mouse_genomes_project 16 92701856 92703218 + Son protein_coding processed_transcript MGP_129S1SvImJ_T0045126.1 MGP_129S1SvImJ_G0023046.1 mouse_genomes_project 16 92703948 92708121 + Son protein_coding processed_transcript MGP_129S1SvImJ_T0045127.1 MGP_129S1SvImJ_G0023046.1 mouse_genomes_project 16 92704178 92708630 + Son protein_coding processed_transcript MGP_129S1SvImJ_T0045128.1 MGP_129S1SvImJ_G0023046.1 mouse_genomes_project 16 92704614 92709011 + Son protein_coding processed_transcript MGP_129S1SvImJ_T0045129.1 MGP_129S1SvImJ_G0023046.1 mouse_genomes_project 16 92705439 92707943 + Son protein_coding retained_intron MGP_129S1SvImJ_T0003715.1 MGP_129S1SvImJ_G0003357.1 mouse_genomes_project 16 91959968 91965513 + antisense antisense MGP_129S1SvImJ_T0044725.1 MGP_129S1SvImJ_G0022893.1 mouse_genomes_project 16 56177795 56210745 - MGP_129S1SvImJ_P0044725 Tmem45a2 protein_coding protein_coding MGP_129S1SvImJ_T0043659.1 MGP_129S1SvImJ_G0022625.1 mouse_genomes_project 16 16683440 16684480 - MGP_129S1SvImJ_P0043659 Olfr165 protein_coding protein_coding MGP_129S1SvImJ_T0043661.1 MGP_129S1SvImJ_G0022625.1 mouse_genomes_project 16 16684036 16694272 - MGP_129S1SvImJ_P0043661 Olfr165 protein_coding protein_coding MGP_129S1SvImJ_T0044394.1 MGP_129S1SvImJ_G0022813.1 mouse_genomes_project 16 36887733 36903780 + MGP_129S1SvImJ_P0044394 Popdc2 protein_coding protein_coding MGP_129S1SvImJ_T0044395.1 MGP_129S1SvImJ_G0022813.1 mouse_genomes_project 16 36887769 36903780 + MGP_129S1SvImJ_P0044395 Popdc2 protein_coding protein_coding MGP_129S1SvImJ_T0044396.1 MGP_129S1SvImJ_G0022813.1 mouse_genomes_project 16 36894356 36899757 + Popdc2 protein_coding processed_transcript MGP_129S1SvImJ_T0044397.1 MGP_129S1SvImJ_G0022813.1 mouse_genomes_project 16 36894963 36903327 + Popdc2 protein_coding processed_transcript MGP_129S1SvImJ_T0044398.1 MGP_129S1SvImJ_G0022813.1 mouse_genomes_project 16 36897535 36899700 + Popdc2 protein_coding processed_transcript MGP_129S1SvImJ_T0003688.1 MGP_129S1SvImJ_G0003337.1 mouse_genomes_project 16 30766406 30769381 - Tnk2os antisense antisense MGP_129S1SvImJ_T0045375.1 MGP_129S1SvImJ_G0023091.1 mouse_genomes_project 16 98903606 98908839 - Fam3b protein_coding processed_transcript MGP_129S1SvImJ_T0045376.1 MGP_129S1SvImJ_G0023091.1 mouse_genomes_project 16 98903640 98942147 - MGP_129S1SvImJ_P0045376 Fam3b protein_coding protein_coding MGP_129S1SvImJ_T0000136.1 MGP_129S1SvImJ_G0000104.1 mouse_genomes_project 16 16358386 16359201 - MGP_129S1SvImJ_P0000136 Iglv1 IG_V_gene IG_V_gene MGP_129S1SvImJ_T0043153.1 MGP_129S1SvImJ_G0022519.1 mouse_genomes_project 16 7914608 7923309 + MGP_129S1SvImJ_P0043153 Snn protein_coding protein_coding MGP_129S1SvImJ_T0042890.1 MGP_129S1SvImJ_G0022450.1 mouse_genomes_project 16 278116 279055 + MGP_129S1SvImJ_P0042890 Olfr15 protein_coding protein_coding MGP_129S1SvImJ_T0044052.1 MGP_129S1SvImJ_G0022726.1 mouse_genomes_project 16 29965281 30018682 - MGP_129S1SvImJ_P0044052 Senp5 protein_coding protein_coding MGP_129S1SvImJ_T0044053.1 MGP_129S1SvImJ_G0022726.1 mouse_genomes_project 16 29966293 29995930 - MGP_129S1SvImJ_P0044053 Senp5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044054.1 MGP_129S1SvImJ_G0022726.1 mouse_genomes_project 16 29981045 29997106 - MGP_129S1SvImJ_P0044054 Senp5 protein_coding protein_coding MGP_129S1SvImJ_T0044055.1 MGP_129S1SvImJ_G0022726.1 mouse_genomes_project 16 29982183 30018573 - Senp5 protein_coding retained_intron MGP_129S1SvImJ_T0043948.1 MGP_129S1SvImJ_G0022702.1 mouse_genomes_project 16 26645220 26752527 - MGP_129S1SvImJ_P0043948 Mb21d2 protein_coding protein_coding MGP_129S1SvImJ_T0017521.1 MGP_129S1SvImJ_G0015315.1 mouse_genomes_project 16 20059558 20062155 + Gm15651 processed_transcript processed_transcript MGP_129S1SvImJ_T0013168.1 MGP_129S1SvImJ_G0011257.1 mouse_genomes_project 16 18011488 18011980 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013162.1 MGP_129S1SvImJ_G0011251.1 mouse_genomes_project 16 16288302 16288950 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0043225.1 MGP_129S1SvImJ_G0022534.1 mouse_genomes_project 16 10695291 10713677 - MGP_129S1SvImJ_P0043225 Pla2g10 protein_coding protein_coding MGP_129S1SvImJ_T0043226.1 MGP_129S1SvImJ_G0022534.1 mouse_genomes_project 16 10695293 10714217 - MGP_129S1SvImJ_P0043226 Pla2g10 protein_coding protein_coding MGP_129S1SvImJ_T0043227.1 MGP_129S1SvImJ_G0022534.1 mouse_genomes_project 16 10695628 10713953 - Pla2g10 protein_coding processed_transcript MGP_129S1SvImJ_T0043228.1 MGP_129S1SvImJ_G0022534.1 mouse_genomes_project 16 10708384 10713913 - Pla2g10 protein_coding processed_transcript MGP_129S1SvImJ_T0044681.1 MGP_129S1SvImJ_G0022884.1 mouse_genomes_project 16 55069539 55110864 + MGP_129S1SvImJ_P0044681 Zbtb11 protein_coding protein_coding MGP_129S1SvImJ_T0044682.1 MGP_129S1SvImJ_G0022884.1 mouse_genomes_project 16 55084988 55088129 + Zbtb11 protein_coding retained_intron MGP_129S1SvImJ_T0044683.1 MGP_129S1SvImJ_G0022884.1 mouse_genomes_project 16 55107142 55110864 + Zbtb11 protein_coding retained_intron MGP_129S1SvImJ_T0043680.1 MGP_129S1SvImJ_G0022636.1 mouse_genomes_project 16 17395135 17425871 + MGP_129S1SvImJ_P0043680 Klhl24 protein_coding protein_coding MGP_129S1SvImJ_T0100807.1 MGP_129S1SvImJ_G0038874.1 mouse_genomes_project 16 80393151 80393267 + Gm23083 snoRNA snoRNA MGP_129S1SvImJ_T0011430.1 MGP_129S1SvImJ_G0009546.1 mouse_genomes_project 16 39694953 39695104 - Gm27717 misc_RNA misc_RNA MGP_129S1SvImJ_T0043625.1 MGP_129S1SvImJ_G0022614.1 mouse_genomes_project 16 15821461 15826718 - MGP_129S1SvImJ_P0043625 Tbx1 protein_coding protein_coding MGP_129S1SvImJ_T0013216.1 MGP_129S1SvImJ_G0011305.1 mouse_genomes_project 16 75802387 75803300 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0044007.1 MGP_129S1SvImJ_G0022716.1 mouse_genomes_project 16 28895835 29026229 - MGP_129S1SvImJ_P0044007 Xxylt1 protein_coding protein_coding MGP_129S1SvImJ_T0044008.1 MGP_129S1SvImJ_G0022716.1 mouse_genomes_project 16 28897665 29006304 - Xxylt1 protein_coding processed_transcript MGP_129S1SvImJ_T0044009.1 MGP_129S1SvImJ_G0022716.1 mouse_genomes_project 16 28953561 29014573 - Xxylt1 protein_coding processed_transcript MGP_129S1SvImJ_T0044010.1 MGP_129S1SvImJ_G0022716.1 mouse_genomes_project 16 28953603 29012574 - Xxylt1 protein_coding processed_transcript MGP_129S1SvImJ_T0013134.1 MGP_129S1SvImJ_G0011223.1 mouse_genomes_project 16 471414 471492 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010134.1 MGP_129S1SvImJ_G0008250.1 mouse_genomes_project 16 14249396 14249493 - Mir301b miRNA miRNA MGP_129S1SvImJ_T0017520.1 MGP_129S1SvImJ_G0015314.1 mouse_genomes_project 16 17849225 17855860 - Gm16618 processed_transcript processed_transcript MGP_129S1SvImJ_T0098839.1 MGP_129S1SvImJ_G0036919.1 mouse_genomes_project 16 11368444 11369656 - Gm15869 sense_intronic sense_intronic MGP_129S1SvImJ_T0044133.1 MGP_129S1SvImJ_G0022746.1 mouse_genomes_project 16 30920811 30926123 - MGP_129S1SvImJ_P0044133 Gm933 protein_coding protein_coding MGP_129S1SvImJ_T0100801.1 MGP_129S1SvImJ_G0038868.1 mouse_genomes_project 16 68156076 68156183 - Gm24681 snoRNA snoRNA MGP_129S1SvImJ_T0043912.1 MGP_129S1SvImJ_G0022689.1 mouse_genomes_project 16 22024285 22659671 + MGP_129S1SvImJ_P0043912 Lpp protein_coding protein_coding MGP_129S1SvImJ_T0043913.1 MGP_129S1SvImJ_G0022689.1 mouse_genomes_project 16 22080874 22659671 + MGP_129S1SvImJ_P0043913 Lpp protein_coding protein_coding MGP_129S1SvImJ_T0043914.1 MGP_129S1SvImJ_G0022689.1 mouse_genomes_project 16 22364569 22659671 + MGP_129S1SvImJ_P0043914 Lpp protein_coding protein_coding MGP_129S1SvImJ_T0013164.1 MGP_129S1SvImJ_G0011253.1 mouse_genomes_project 16 16430683 16448190 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0043526.1 MGP_129S1SvImJ_G0022595.1 mouse_genomes_project 16 15081098 15084798 + MGP_129S1SvImJ_P0043526 Tssk1 protein_coding protein_coding MGP_129S1SvImJ_T0043273.1 MGP_129S1SvImJ_G0022544.1 mouse_genomes_project 16 11351580 11369703 - Fopnl protein_coding processed_transcript MGP_129S1SvImJ_T0043274.1 MGP_129S1SvImJ_G0022544.1 mouse_genomes_project 16 11352268 11369776 - MGP_129S1SvImJ_P0043274 Fopnl protein_coding protein_coding MGP_129S1SvImJ_T0043406.1 MGP_129S1SvImJ_G0022575.1 mouse_genomes_project 16 14368942 14400803 + MGP_129S1SvImJ_P0043406 Hic2 protein_coding protein_coding MGP_129S1SvImJ_T0043407.1 MGP_129S1SvImJ_G0022575.1 mouse_genomes_project 16 14369034 14398968 + MGP_129S1SvImJ_P0043407 Hic2 protein_coding protein_coding MGP_129S1SvImJ_T0003696.1 MGP_129S1SvImJ_G0003343.1 mouse_genomes_project 16 34324219 34339759 - Gm15564 antisense antisense MGP_129S1SvImJ_T0003697.1 MGP_129S1SvImJ_G0003343.1 mouse_genomes_project 16 34324242 34339819 - Gm15564 antisense antisense MGP_129S1SvImJ_T0044281.1 MGP_129S1SvImJ_G0022785.1 mouse_genomes_project 16 34726611 34731566 - MGP_129S1SvImJ_P0044281 BC117090 protein_coding protein_coding MGP_129S1SvImJ_T0045345.1 MGP_129S1SvImJ_G0023083.1 mouse_genomes_project 16 97571404 97599648 + MGP_129S1SvImJ_P0045345 Sh3bgr protein_coding protein_coding MGP_129S1SvImJ_T0045346.1 MGP_129S1SvImJ_G0023083.1 mouse_genomes_project 16 97571605 97599643 + MGP_129S1SvImJ_P0045346 Sh3bgr protein_coding protein_coding MGP_129S1SvImJ_T0045347.1 MGP_129S1SvImJ_G0023083.1 mouse_genomes_project 16 97571605 97595304 + MGP_129S1SvImJ_P0045347 Sh3bgr protein_coding protein_coding MGP_129S1SvImJ_T0045348.1 MGP_129S1SvImJ_G0023083.1 mouse_genomes_project 16 97571638 97590844 + MGP_129S1SvImJ_P0045348 Sh3bgr protein_coding protein_coding MGP_129S1SvImJ_T0045349.1 MGP_129S1SvImJ_G0023083.1 mouse_genomes_project 16 97571663 97595335 + MGP_129S1SvImJ_P0045349 Sh3bgr protein_coding protein_coding MGP_129S1SvImJ_T0045350.1 MGP_129S1SvImJ_G0023083.1 mouse_genomes_project 16 97575953 97590844 + MGP_129S1SvImJ_P0045350 Sh3bgr protein_coding protein_coding MGP_129S1SvImJ_T0045351.1 MGP_129S1SvImJ_G0023083.1 mouse_genomes_project 16 97576873 97595307 + MGP_129S1SvImJ_P0045351 Sh3bgr protein_coding protein_coding MGP_129S1SvImJ_T0045352.1 MGP_129S1SvImJ_G0023083.1 mouse_genomes_project 16 97590751 97599640 + MGP_129S1SvImJ_P0045352 Sh3bgr protein_coding protein_coding MGP_129S1SvImJ_T0044803.1 MGP_129S1SvImJ_G0022929.1 mouse_genomes_project 16 58684000 58740634 + MGP_129S1SvImJ_P0044803 Gabrr3 protein_coding protein_coding MGP_129S1SvImJ_T0010150.1 MGP_129S1SvImJ_G0008266.1 mouse_genomes_project 16 30320345 30320479 - Mir1946a miRNA miRNA MGP_129S1SvImJ_T0013189.1 MGP_129S1SvImJ_G0011278.1 mouse_genomes_project 16 37359055 37359449 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0043917.1 MGP_129S1SvImJ_G0022691.1 mouse_genomes_project 16 23386505 23533274 + MGP_129S1SvImJ_P0043917 Trp63 protein_coding protein_coding MGP_129S1SvImJ_T0043918.1 MGP_129S1SvImJ_G0022691.1 mouse_genomes_project 16 23386507 23590215 + MGP_129S1SvImJ_P0043918 Trp63 protein_coding protein_coding MGP_129S1SvImJ_T0043919.1 MGP_129S1SvImJ_G0022691.1 mouse_genomes_project 16 23387032 23602375 + MGP_129S1SvImJ_P0043919 Trp63 protein_coding protein_coding MGP_129S1SvImJ_T0043920.1 MGP_129S1SvImJ_G0022691.1 mouse_genomes_project 16 23513862 23590215 + MGP_129S1SvImJ_P0043920 Trp63 protein_coding protein_coding MGP_129S1SvImJ_T0043921.1 MGP_129S1SvImJ_G0022691.1 mouse_genomes_project 16 23513862 23580934 + MGP_129S1SvImJ_P0043921 Trp63 protein_coding protein_coding MGP_129S1SvImJ_T0043922.1 MGP_129S1SvImJ_G0022691.1 mouse_genomes_project 16 23513862 23605173 + MGP_129S1SvImJ_P0043922 Trp63 protein_coding protein_coding MGP_129S1SvImJ_T0043923.1 MGP_129S1SvImJ_G0022691.1 mouse_genomes_project 16 23513862 23605173 + MGP_129S1SvImJ_P0043923 Trp63 protein_coding protein_coding MGP_129S1SvImJ_T0043830.1 MGP_129S1SvImJ_G0022666.1 mouse_genomes_project 16 19527699 19642027 - Igf2bp2 protein_coding retained_intron MGP_129S1SvImJ_T0043831.1 MGP_129S1SvImJ_G0022666.1 mouse_genomes_project 16 19527711 19558487 - Igf2bp2 protein_coding retained_intron MGP_129S1SvImJ_T0043832.1 MGP_129S1SvImJ_G0022666.1 mouse_genomes_project 16 19527998 19641971 - MGP_129S1SvImJ_P0043832 Igf2bp2 protein_coding protein_coding MGP_129S1SvImJ_T0043833.1 MGP_129S1SvImJ_G0022666.1 mouse_genomes_project 16 19530003 19532335 - Igf2bp2 protein_coding retained_intron MGP_129S1SvImJ_T0043834.1 MGP_129S1SvImJ_G0022666.1 mouse_genomes_project 16 19545404 19548504 - Igf2bp2 protein_coding retained_intron MGP_129S1SvImJ_T0043835.1 MGP_129S1SvImJ_G0022666.1 mouse_genomes_project 16 19553320 19611415 - Igf2bp2 protein_coding processed_transcript MGP_129S1SvImJ_T0043836.1 MGP_129S1SvImJ_G0022666.1 mouse_genomes_project 16 19625668 19642000 - Igf2bp2 protein_coding processed_transcript MGP_129S1SvImJ_T0043837.1 MGP_129S1SvImJ_G0022666.1 mouse_genomes_project 16 19639888 19641983 - Igf2bp2 protein_coding retained_intron MGP_129S1SvImJ_T0045202.1 MGP_129S1SvImJ_G0023060.1 mouse_genomes_project 16 94743918 94772784 - Setd4 protein_coding retained_intron MGP_129S1SvImJ_T0045203.1 MGP_129S1SvImJ_G0023060.1 mouse_genomes_project 16 94743918 94772796 - MGP_129S1SvImJ_P0045203 Setd4 protein_coding protein_coding MGP_129S1SvImJ_T0045204.1 MGP_129S1SvImJ_G0023060.1 mouse_genomes_project 16 94743919 94748765 - Setd4 protein_coding processed_transcript MGP_129S1SvImJ_T0045205.1 MGP_129S1SvImJ_G0023060.1 mouse_genomes_project 16 94743921 94750384 - Setd4 protein_coding retained_intron MGP_129S1SvImJ_T0045206.1 MGP_129S1SvImJ_G0023060.1 mouse_genomes_project 16 94743921 94772808 - MGP_129S1SvImJ_P0045206 Setd4 protein_coding protein_coding MGP_129S1SvImJ_T0045207.1 MGP_129S1SvImJ_G0023060.1 mouse_genomes_project 16 94752258 94763035 - Setd4 protein_coding processed_transcript MGP_129S1SvImJ_T0045208.1 MGP_129S1SvImJ_G0023060.1 mouse_genomes_project 16 94752390 94773057 - Setd4 protein_coding processed_transcript MGP_129S1SvImJ_T0045209.1 MGP_129S1SvImJ_G0023060.1 mouse_genomes_project 16 94767246 94772808 - Setd4 protein_coding processed_transcript MGP_129S1SvImJ_T0006884.1 MGP_129S1SvImJ_G0005677.1 mouse_genomes_project 16 88533081 88543578 + 2810407A14Rik lincRNA lincRNA MGP_129S1SvImJ_T0006885.1 MGP_129S1SvImJ_G0005677.1 mouse_genomes_project 16 88536575 88591243 + 2810407A14Rik lincRNA lincRNA MGP_129S1SvImJ_T0044578.1 MGP_129S1SvImJ_G0022853.1 mouse_genomes_project 16 44317985 44388093 + MGP_129S1SvImJ_P0044578 Slc9c1 protein_coding protein_coding MGP_129S1SvImJ_T0044579.1 MGP_129S1SvImJ_G0022853.1 mouse_genomes_project 16 44322337 44387978 + MGP_129S1SvImJ_P0044579 Slc9c1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044580.1 MGP_129S1SvImJ_G0022853.1 mouse_genomes_project 16 44322337 44387978 + MGP_129S1SvImJ_P0044580 Slc9c1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043643.1 MGP_129S1SvImJ_G0022620.1 mouse_genomes_project 16 16101892 16105481 + MGP_129S1SvImJ_P0043643 2510002D24Rik protein_coding protein_coding MGP_129S1SvImJ_T0043644.1 MGP_129S1SvImJ_G0022620.1 mouse_genomes_project 16 16101895 16102702 + MGP_129S1SvImJ_P0043644 2510002D24Rik protein_coding protein_coding MGP_129S1SvImJ_T0043645.1 MGP_129S1SvImJ_G0022620.1 mouse_genomes_project 16 16101895 16105366 + MGP_129S1SvImJ_P0043645 2510002D24Rik protein_coding protein_coding MGP_129S1SvImJ_T0043647.1 MGP_129S1SvImJ_G0022620.1 mouse_genomes_project 16 16101969 16105115 + 2510002D24Rik protein_coding retained_intron MGP_129S1SvImJ_T0000983.1 MGP_129S1SvImJ_G0000914.1 mouse_genomes_project 16 57073552 57073962 + TEC TEC MGP_129S1SvImJ_T0099512.1 MGP_129S1SvImJ_G0037579.1 mouse_genomes_project 16 34616428 34616533 - Gm24801 snRNA snRNA MGP_129S1SvImJ_T0043014.1 MGP_129S1SvImJ_G0022475.1 mouse_genomes_project 16 1400471 1457581 + MGP_129S1SvImJ_P0043014 Mgrn1 protein_coding protein_coding MGP_129S1SvImJ_T0043015.1 MGP_129S1SvImJ_G0022475.1 mouse_genomes_project 16 1400471 1457581 + MGP_129S1SvImJ_P0043015 Mgrn1 protein_coding protein_coding MGP_129S1SvImJ_T0043016.1 MGP_129S1SvImJ_G0022475.1 mouse_genomes_project 16 1400748 1458154 + MGP_129S1SvImJ_P0043016 Mgrn1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0044734.1 MGP_129S1SvImJ_G0022899.1 mouse_genomes_project 16 56506347 56730120 + MGP_129S1SvImJ_P0044734 Filip1l protein_coding protein_coding MGP_129S1SvImJ_T0044735.1 MGP_129S1SvImJ_G0022899.1 mouse_genomes_project 16 56506531 56671235 + MGP_129S1SvImJ_P0044735 Filip1l protein_coding protein_coding MGP_129S1SvImJ_T0044736.1 MGP_129S1SvImJ_G0022899.1 mouse_genomes_project 16 56704887 56729798 + MGP_129S1SvImJ_P0044736 Filip1l protein_coding protein_coding MGP_129S1SvImJ_T0044483.1 MGP_129S1SvImJ_G0022833.1 mouse_genomes_project 16 42698170 42738369 - MGP_129S1SvImJ_P0044483 Gramd1c protein_coding protein_coding MGP_129S1SvImJ_T0044484.1 MGP_129S1SvImJ_G0022833.1 mouse_genomes_project 16 42698175 42755841 - MGP_129S1SvImJ_P0044484 Gramd1c protein_coding protein_coding MGP_129S1SvImJ_T0044485.1 MGP_129S1SvImJ_G0022833.1 mouse_genomes_project 16 42698175 42741766 - MGP_129S1SvImJ_P0044485 Gramd1c protein_coding protein_coding MGP_129S1SvImJ_T0044486.1 MGP_129S1SvImJ_G0022833.1 mouse_genomes_project 16 42705729 42768525 - MGP_129S1SvImJ_P0044486 Gramd1c protein_coding unknown_likely_coding MGP_129S1SvImJ_T0044889.1 MGP_129S1SvImJ_G0022956.1 mouse_genomes_project 16 76339665 76426703 - MGP_129S1SvImJ_P0044889 Nrip1 protein_coding protein_coding MGP_129S1SvImJ_T0044890.1 MGP_129S1SvImJ_G0022956.1 mouse_genomes_project 16 76343128 76425924 - MGP_129S1SvImJ_P0044890 Nrip1 protein_coding protein_coding MGP_129S1SvImJ_T0044891.1 MGP_129S1SvImJ_G0022956.1 mouse_genomes_project 16 76346912 76377081 - MGP_129S1SvImJ_P0044891 Nrip1 protein_coding protein_coding MGP_129S1SvImJ_T0044892.1 MGP_129S1SvImJ_G0022956.1 mouse_genomes_project 16 76381667 76425912 - Nrip1 protein_coding retained_intron MGP_129S1SvImJ_T0044893.1 MGP_129S1SvImJ_G0022956.1 mouse_genomes_project 16 76381879 76425915 - Nrip1 protein_coding retained_intron MGP_129S1SvImJ_T0044894.1 MGP_129S1SvImJ_G0022956.1 mouse_genomes_project 16 76404934 76425924 - Nrip1 protein_coding retained_intron MGP_129S1SvImJ_T0044095.1 MGP_129S1SvImJ_G0022739.1 mouse_genomes_project 16 30508591 30557074 + MGP_129S1SvImJ_P0044095 Pcyt1a protein_coding protein_coding MGP_129S1SvImJ_T0044096.1 MGP_129S1SvImJ_G0022739.1 mouse_genomes_project 16 30508603 30531669 + Pcyt1a protein_coding retained_intron MGP_129S1SvImJ_T0044097.1 MGP_129S1SvImJ_G0022739.1 mouse_genomes_project 16 30508625 30534857 + Pcyt1a protein_coding retained_intron MGP_129S1SvImJ_T0044098.1 MGP_129S1SvImJ_G0022739.1 mouse_genomes_project 16 30508685 30534727 + Pcyt1a protein_coding retained_intron MGP_129S1SvImJ_T0000039.1 MGP_129S1SvImJ_G0000032.1 mouse_genomes_project 16 16335524 16335562 - MGP_129S1SvImJ_P0000039 Iglj1 IG_J_gene IG_J_gene MGP_129S1SvImJ_T0043190.1 MGP_129S1SvImJ_G0022525.1 mouse_genomes_project 16 8202916 8658467 + MGP_129S1SvImJ_P0043190 Snx29 protein_coding protein_coding MGP_129S1SvImJ_T0043191.1 MGP_129S1SvImJ_G0022525.1 mouse_genomes_project 16 8202980 8290935 + MGP_129S1SvImJ_P0043191 Snx29 protein_coding protein_coding MGP_129S1SvImJ_T0043192.1 MGP_129S1SvImJ_G0022525.1 mouse_genomes_project 16 8292746 8658467 + MGP_129S1SvImJ_P0043192 Snx29 protein_coding protein_coding MGP_129S1SvImJ_T0043193.1 MGP_129S1SvImJ_G0022525.1 mouse_genomes_project 16 8293755 8561825 + MGP_129S1SvImJ_P0043193 Snx29 protein_coding protein_coding MGP_129S1SvImJ_T0043194.1 MGP_129S1SvImJ_G0022525.1 mouse_genomes_project 16 8307990 8580144 + MGP_129S1SvImJ_P0043194 Snx29 protein_coding protein_coding MGP_129S1SvImJ_T0043195.1 MGP_129S1SvImJ_G0022525.1 mouse_genomes_project 16 8332049 8530719 + Snx29 protein_coding retained_intron MGP_129S1SvImJ_T0043196.1 MGP_129S1SvImJ_G0022525.1 mouse_genomes_project 16 8334174 8561766 + Snx29 protein_coding retained_intron MGP_129S1SvImJ_T0017523.1 MGP_129S1SvImJ_G0015317.1 mouse_genomes_project 16 24457814 24502023 - Gm20319 processed_transcript processed_transcript MGP_129S1SvImJ_T0017524.1 MGP_129S1SvImJ_G0015317.1 mouse_genomes_project 16 24458112 24502034 - Gm20319 processed_transcript processed_transcript MGP_129S1SvImJ_T0017525.1 MGP_129S1SvImJ_G0015317.1 mouse_genomes_project 16 24473729 24502034 - Gm20319 processed_transcript processed_transcript MGP_129S1SvImJ_T0010136.1 MGP_129S1SvImJ_G0008252.1 mouse_genomes_project 16 15499642 15499721 - Mir1306 miRNA miRNA MGP_129S1SvImJ_T0044968.1 MGP_129S1SvImJ_G0022980.1 mouse_genomes_project 16 88276358 88322786 + MGP_129S1SvImJ_P0044968 Map3k7cl protein_coding protein_coding MGP_129S1SvImJ_T0044399.1 MGP_129S1SvImJ_G0022814.1 mouse_genomes_project 16 36922793 36961618 - MGP_129S1SvImJ_P0044399 Pla1a protein_coding protein_coding MGP_129S1SvImJ_T0013221.1 MGP_129S1SvImJ_G0011310.1 mouse_genomes_project 16 83882752 83883235 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099497.1 MGP_129S1SvImJ_G0037564.1 mouse_genomes_project 16 14487167 14487274 - Gm24927 snRNA snRNA MGP_129S1SvImJ_T0045013.1 MGP_129S1SvImJ_G0023016.1 mouse_genomes_project 16 90018753 90019296 + MGP_129S1SvImJ_P0045013 1110057P08Rik protein_coding protein_coding MGP_129S1SvImJ_T0013160.1 MGP_129S1SvImJ_G0011249.1 mouse_genomes_project 16 16205496 16205785 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0042906.1 MGP_129S1SvImJ_G0022455.1 mouse_genomes_project 16 337796 351254 - 1700037C18Rik protein_coding processed_transcript MGP_129S1SvImJ_T0042907.1 MGP_129S1SvImJ_G0022455.1 mouse_genomes_project 16 337798 350358 - MGP_129S1SvImJ_P0042907 1700037C18Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042909.1 MGP_129S1SvImJ_G0022455.1 mouse_genomes_project 16 346920 351290 - MGP_129S1SvImJ_P0042909 1700037C18Rik protein_coding protein_coding MGP_129S1SvImJ_T0042910.1 MGP_129S1SvImJ_G0022455.1 mouse_genomes_project 16 348398 350303 - MGP_129S1SvImJ_P0042910 1700037C18Rik protein_coding protein_coding MGP_129S1SvImJ_T0042911.1 MGP_129S1SvImJ_G0022455.1 mouse_genomes_project 16 348858 350252 - MGP_129S1SvImJ_P0042911 1700037C18Rik protein_coding protein_coding MGP_129S1SvImJ_T0042912.1 MGP_129S1SvImJ_G0022455.1 mouse_genomes_project 16 349613 351224 - MGP_129S1SvImJ_P0042912 1700037C18Rik protein_coding protein_coding MGP_129S1SvImJ_T0045211.1 MGP_129S1SvImJ_G0023062.1 mouse_genomes_project 16 94881986 94889598 + MGP_129S1SvImJ_P0045211 Cbr3 protein_coding protein_coding MGP_129S1SvImJ_T0044876.1 MGP_129S1SvImJ_G0022952.1 mouse_genomes_project 16 75565301 75609271 - MGP_129S1SvImJ_P0044876 Lipi protein_coding protein_coding MGP_129S1SvImJ_T0044877.1 MGP_129S1SvImJ_G0022952.1 mouse_genomes_project 16 75565331 75592738 - Lipi protein_coding processed_transcript MGP_129S1SvImJ_T0044985.1 MGP_129S1SvImJ_G0022992.1 mouse_genomes_project 16 89579140 89581285 + MGP_129S1SvImJ_P0044985 2310034C09Rik protein_coding protein_coding MGP_129S1SvImJ_T0044988.1 MGP_129S1SvImJ_G0022995.1 mouse_genomes_project 16 89636145 89643278 - MGP_129S1SvImJ_P0044988 Krtap14 protein_coding protein_coding MGP_129S1SvImJ_T0044990.1 MGP_129S1SvImJ_G0022995.1 mouse_genomes_project 16 89642745 89643601 - MGP_129S1SvImJ_P0044990 Krtap14 protein_coding protein_coding MGP_129S1SvImJ_T0043536.1 MGP_129S1SvImJ_G0022600.1 mouse_genomes_project 16 15245998 15267187 + MGP_129S1SvImJ_P0043536 Dgcr6 protein_coding protein_coding MGP_129S1SvImJ_T0043537.1 MGP_129S1SvImJ_G0022600.1 mouse_genomes_project 16 15246014 15249698 + Dgcr6 protein_coding processed_transcript MGP_129S1SvImJ_T0043538.1 MGP_129S1SvImJ_G0022600.1 mouse_genomes_project 16 15246030 15262561 + Dgcr6 protein_coding processed_transcript MGP_129S1SvImJ_T0043540.1 MGP_129S1SvImJ_G0022600.1 mouse_genomes_project 16 15261211 15267169 + MGP_129S1SvImJ_P0043540 Dgcr6 protein_coding protein_coding MGP_129S1SvImJ_T0043541.1 MGP_129S1SvImJ_G0022600.1 mouse_genomes_project 16 15262495 15267185 + MGP_129S1SvImJ_P0043541 Dgcr6 protein_coding protein_coding MGP_129S1SvImJ_T0043542.1 MGP_129S1SvImJ_G0022600.1 mouse_genomes_project 16 15262500 15267459 + MGP_129S1SvImJ_P0043542 Dgcr6 protein_coding protein_coding MGP_129S1SvImJ_T0043543.1 MGP_129S1SvImJ_G0022600.1 mouse_genomes_project 16 15262542 15267464 + MGP_129S1SvImJ_P0043543 Dgcr6 protein_coding protein_coding MGP_129S1SvImJ_T0043544.1 MGP_129S1SvImJ_G0022600.1 mouse_genomes_project 16 15265306 15267170 + Dgcr6 protein_coding processed_transcript MGP_129S1SvImJ_T0011434.1 MGP_129S1SvImJ_G0009550.1 mouse_genomes_project 16 65506782 65507095 + Gm22217 misc_RNA misc_RNA MGP_129S1SvImJ_T0003695.1 MGP_129S1SvImJ_G0003342.1 mouse_genomes_project 16 33222810 33226306 - 1700119H24Rik antisense antisense MGP_129S1SvImJ_T0100804.1 MGP_129S1SvImJ_G0038871.1 mouse_genomes_project 16 74569415 74569561 + Gm26307 snoRNA snoRNA MGP_129S1SvImJ_T0043516.1 MGP_129S1SvImJ_G0022592.1 mouse_genomes_project 16 15017835 15020924 - MGP_129S1SvImJ_P0043516 Car15 protein_coding protein_coding MGP_129S1SvImJ_T0017516.1 MGP_129S1SvImJ_G0015311.1 mouse_genomes_project 16 1784339 1825199 + Gm15983 processed_transcript processed_transcript MGP_129S1SvImJ_T0044898.1 MGP_129S1SvImJ_G0022960.1 mouse_genomes_project 16 78461490 78507353 + MGP_129S1SvImJ_P0044898 Cxadr protein_coding protein_coding MGP_129S1SvImJ_T0044899.1 MGP_129S1SvImJ_G0022960.1 mouse_genomes_project 16 78461750 78519279 + MGP_129S1SvImJ_P0044899 Cxadr protein_coding protein_coding MGP_129S1SvImJ_T0044722.1 MGP_129S1SvImJ_G0022892.1 mouse_genomes_project 16 55947821 56036135 - MGP_129S1SvImJ_P0044722 Tmem45a protein_coding protein_coding MGP_129S1SvImJ_T0044723.1 MGP_129S1SvImJ_G0022892.1 mouse_genomes_project 16 55949151 55952813 - Tmem45a protein_coding processed_transcript MGP_129S1SvImJ_T0044724.1 MGP_129S1SvImJ_G0022892.1 mouse_genomes_project 16 55970224 55977921 - MGP_129S1SvImJ_P0044724 Tmem45a protein_coding protein_coding MGP_129S1SvImJ_T0098525.1 MGP_129S1SvImJ_G0036610.1 mouse_genomes_project 16 98934936 98935044 - Gm24777 rRNA rRNA MGP_129S1SvImJ_T0100808.1 MGP_129S1SvImJ_G0038875.1 mouse_genomes_project 16 85314259 85314386 + Gm26153 snoRNA snoRNA MGP_129S1SvImJ_T0043930.1 MGP_129S1SvImJ_G0022695.1 mouse_genomes_project 16 24239018 24264008 - MGP_129S1SvImJ_P0043930 Tmem207 protein_coding protein_coding MGP_129S1SvImJ_T0010128.1 MGP_129S1SvImJ_G0008244.1 mouse_genomes_project 16 10418064 10418151 + Mir365-1 miRNA miRNA MGP_129S1SvImJ_T0100770.1 MGP_129S1SvImJ_G0038837.1 mouse_genomes_project 16 16589570 16589696 + Gm22158 snoRNA snoRNA MGP_129S1SvImJ_T0044048.1 MGP_129S1SvImJ_G0022725.1 mouse_genomes_project 16 29951501 29961248 + MGP_129S1SvImJ_P0044048 Ncbp2 protein_coding protein_coding MGP_129S1SvImJ_T0044049.1 MGP_129S1SvImJ_G0022725.1 mouse_genomes_project 16 29951589 29959924 + Ncbp2 protein_coding retained_intron MGP_129S1SvImJ_T0044050.1 MGP_129S1SvImJ_G0022725.1 mouse_genomes_project 16 29951594 29964557 + Ncbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0044051.1 MGP_129S1SvImJ_G0022725.1 mouse_genomes_project 16 29951601 29959952 + MGP_129S1SvImJ_P0044051 Ncbp2 protein_coding protein_coding MGP_129S1SvImJ_T0044595.1 MGP_129S1SvImJ_G0022859.1 mouse_genomes_project 16 44538398 44640557 - MGP_129S1SvImJ_P0044595 Phldb2 protein_coding protein_coding MGP_129S1SvImJ_T0044596.1 MGP_129S1SvImJ_G0022859.1 mouse_genomes_project 16 44538549 44640413 - MGP_129S1SvImJ_P0044596 Phldb2 protein_coding protein_coding MGP_129S1SvImJ_T0044597.1 MGP_129S1SvImJ_G0022859.1 mouse_genomes_project 16 44539312 44592871 - MGP_129S1SvImJ_P0044597 Phldb2 protein_coding protein_coding MGP_129S1SvImJ_T0044598.1 MGP_129S1SvImJ_G0022859.1 mouse_genomes_project 16 44548143 44759813 - MGP_129S1SvImJ_P0044598 Phldb2 protein_coding protein_coding MGP_129S1SvImJ_T0044599.1 MGP_129S1SvImJ_G0022859.1 mouse_genomes_project 16 44554322 44563872 - Phldb2 protein_coding processed_transcript MGP_129S1SvImJ_T0044600.1 MGP_129S1SvImJ_G0022859.1 mouse_genomes_project 16 44569303 44580650 - Phldb2 protein_coding processed_transcript MGP_129S1SvImJ_T0044601.1 MGP_129S1SvImJ_G0022859.1 mouse_genomes_project 16 44571919 44582764 - MGP_129S1SvImJ_P0044601 Phldb2 protein_coding protein_coding MGP_129S1SvImJ_T0044602.1 MGP_129S1SvImJ_G0022859.1 mouse_genomes_project 16 44620396 44759708 - MGP_129S1SvImJ_P0044602 Phldb2 protein_coding protein_coding MGP_129S1SvImJ_T0044603.1 MGP_129S1SvImJ_G0022859.1 mouse_genomes_project 16 44620565 44640522 - Phldb2 protein_coding processed_transcript MGP_129S1SvImJ_T0044604.1 MGP_129S1SvImJ_G0022859.1 mouse_genomes_project 16 44702181 44703108 - Phldb2 protein_coding processed_transcript MGP_129S1SvImJ_T0044605.1 MGP_129S1SvImJ_G0022859.1 mouse_genomes_project 16 44702372 44759748 - Phldb2 protein_coding processed_transcript MGP_129S1SvImJ_T0010155.1 MGP_129S1SvImJ_G0008271.1 mouse_genomes_project 16 38975824 38975927 - Gm27887 miRNA miRNA MGP_129S1SvImJ_T0044227.1 MGP_129S1SvImJ_G0022764.1 mouse_genomes_project 16 33033767 33170571 + Mylk protein_coding retained_intron MGP_129S1SvImJ_T0044228.1 MGP_129S1SvImJ_G0022764.1 mouse_genomes_project 16 33077391 33289305 + MGP_129S1SvImJ_P0044228 Mylk protein_coding protein_coding MGP_129S1SvImJ_T0044056.1 MGP_129S1SvImJ_G0022727.1 mouse_genomes_project 16 30033903 30105041 - MGP_129S1SvImJ_P0044056 Pak2 protein_coding protein_coding MGP_129S1SvImJ_T0044057.1 MGP_129S1SvImJ_G0022727.1 mouse_genomes_project 16 30051740 30063717 - Pak2 protein_coding retained_intron MGP_129S1SvImJ_T0044945.1 MGP_129S1SvImJ_G0022976.1 mouse_genomes_project 16 88086007 88148256 - MGP_129S1SvImJ_P0044945 Ltn1 protein_coding protein_coding MGP_129S1SvImJ_T0003720.1 MGP_129S1SvImJ_G0003362.1 mouse_genomes_project 16 97455104 97472608 + Gm15341 antisense antisense MGP_129S1SvImJ_T0044622.1 MGP_129S1SvImJ_G0022866.1 mouse_genomes_project 16 47610032 47645285 - MGP_129S1SvImJ_P0044622 Trat1 protein_coding protein_coding MGP_129S1SvImJ_T0044934.1 MGP_129S1SvImJ_G0022971.1 mouse_genomes_project 16 85538292 85778920 - MGP_129S1SvImJ_P0044934 App protein_coding unknown_likely_coding MGP_129S1SvImJ_T0044935.1 MGP_129S1SvImJ_G0022971.1 mouse_genomes_project 16 85540075 85779069 - MGP_129S1SvImJ_P0044935 App protein_coding protein_coding MGP_129S1SvImJ_T0043253.1 MGP_129S1SvImJ_G0022538.1 mouse_genomes_project 16 10926379 10971995 + MGP_129S1SvImJ_P0043253 Mpv17l protein_coding protein_coding MGP_129S1SvImJ_T0043254.1 MGP_129S1SvImJ_G0022538.1 mouse_genomes_project 16 10961685 10969837 + MGP_129S1SvImJ_P0043254 Mpv17l protein_coding protein_coding MGP_129S1SvImJ_T0043255.1 MGP_129S1SvImJ_G0022538.1 mouse_genomes_project 16 10961716 10968039 + MGP_129S1SvImJ_P0043255 Mpv17l protein_coding protein_coding MGP_129S1SvImJ_T0043256.1 MGP_129S1SvImJ_G0022538.1 mouse_genomes_project 16 10961750 10969696 + MGP_129S1SvImJ_P0043256 Mpv17l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043257.1 MGP_129S1SvImJ_G0022538.1 mouse_genomes_project 16 10961757 10967993 + MGP_129S1SvImJ_P0043257 Mpv17l protein_coding protein_coding MGP_129S1SvImJ_T0043258.1 MGP_129S1SvImJ_G0022538.1 mouse_genomes_project 16 10962149 10967959 + MGP_129S1SvImJ_P0043258 Mpv17l protein_coding protein_coding MGP_129S1SvImJ_T0006882.1 MGP_129S1SvImJ_G0005676.1 mouse_genomes_project 16 85276302 85288361 + Mir155hg lincRNA lincRNA MGP_129S1SvImJ_T0006883.1 MGP_129S1SvImJ_G0005676.1 mouse_genomes_project 16 85286138 85288361 + Mir155hg lincRNA lincRNA MGP_129S1SvImJ_T0100779.1 MGP_129S1SvImJ_G0038846.1 mouse_genomes_project 16 28822301 28822436 + Gm25375 snoRNA snoRNA MGP_129S1SvImJ_T0006880.1 MGP_129S1SvImJ_G0005675.1 mouse_genomes_project 16 77106392 77115812 - lincRNA lincRNA MGP_129S1SvImJ_T0006881.1 MGP_129S1SvImJ_G0005675.1 mouse_genomes_project 16 77110688 77115818 - lincRNA lincRNA MGP_129S1SvImJ_T0043044.1 MGP_129S1SvImJ_G0022486.1 mouse_genomes_project 16 1729951 1738691 - MGP_129S1SvImJ_P0043044 Nagpa protein_coding protein_coding MGP_129S1SvImJ_T0043045.1 MGP_129S1SvImJ_G0022486.1 mouse_genomes_project 16 1729951 1738681 - MGP_129S1SvImJ_P0043045 Nagpa protein_coding protein_coding MGP_129S1SvImJ_T0043046.1 MGP_129S1SvImJ_G0022486.1 mouse_genomes_project 16 1730049 1732444 - Nagpa protein_coding processed_transcript MGP_129S1SvImJ_T0043047.1 MGP_129S1SvImJ_G0022486.1 mouse_genomes_project 16 1734491 1738156 - Nagpa protein_coding retained_intron MGP_129S1SvImJ_T0045064.1 MGP_129S1SvImJ_G0023032.1 mouse_genomes_project 16 91909280 91991692 - MGP_129S1SvImJ_P0045064 Synj1 protein_coding protein_coding MGP_129S1SvImJ_T0045065.1 MGP_129S1SvImJ_G0023032.1 mouse_genomes_project 16 91909290 91991479 - MGP_129S1SvImJ_P0045065 Synj1 protein_coding protein_coding MGP_129S1SvImJ_T0045066.1 MGP_129S1SvImJ_G0023032.1 mouse_genomes_project 16 91909295 91923544 - MGP_129S1SvImJ_P0045066 Synj1 protein_coding protein_coding MGP_129S1SvImJ_T0045067.1 MGP_129S1SvImJ_G0023032.1 mouse_genomes_project 16 91911427 91991497 - MGP_129S1SvImJ_P0045067 Synj1 protein_coding protein_coding MGP_129S1SvImJ_T0045068.1 MGP_129S1SvImJ_G0023032.1 mouse_genomes_project 16 91911844 91919778 - Synj1 protein_coding processed_transcript MGP_129S1SvImJ_T0045069.1 MGP_129S1SvImJ_G0023032.1 mouse_genomes_project 16 91911990 91917996 - MGP_129S1SvImJ_P0045069 Synj1 protein_coding protein_coding MGP_129S1SvImJ_T0045070.1 MGP_129S1SvImJ_G0023032.1 mouse_genomes_project 16 91917600 91923549 - MGP_129S1SvImJ_P0045070 Synj1 protein_coding protein_coding MGP_129S1SvImJ_T0045071.1 MGP_129S1SvImJ_G0023032.1 mouse_genomes_project 16 91933797 91991441 - Synj1 protein_coding retained_intron MGP_129S1SvImJ_T0045072.1 MGP_129S1SvImJ_G0023032.1 mouse_genomes_project 16 91937427 91991440 - MGP_129S1SvImJ_P0045072 Synj1 protein_coding protein_coding MGP_129S1SvImJ_T0045073.1 MGP_129S1SvImJ_G0023032.1 mouse_genomes_project 16 91989655 91991443 - Synj1 protein_coding retained_intron MGP_129S1SvImJ_T0011431.1 MGP_129S1SvImJ_G0009547.1 mouse_genomes_project 16 39933996 39934159 - Gm27587 misc_RNA misc_RNA MGP_129S1SvImJ_T0098520.1 MGP_129S1SvImJ_G0036605.1 mouse_genomes_project 16 36342772 36342888 + n-R5s34 rRNA rRNA MGP_129S1SvImJ_T0044969.1 MGP_129S1SvImJ_G0022981.1 mouse_genomes_project 16 88441250 88477032 + MGP_129S1SvImJ_P0044969 Bach1 protein_coding protein_coding MGP_129S1SvImJ_T0044970.1 MGP_129S1SvImJ_G0022981.1 mouse_genomes_project 16 88441270 88475381 + Bach1 protein_coding processed_transcript MGP_129S1SvImJ_T0044971.1 MGP_129S1SvImJ_G0022981.1 mouse_genomes_project 16 88441309 88465611 + Bach1 protein_coding retained_intron MGP_129S1SvImJ_T0043717.1 MGP_129S1SvImJ_G0022644.1 mouse_genomes_project 16 17873982 17882560 + MGP_129S1SvImJ_P0043717 Ap2m1 protein_coding protein_coding MGP_129S1SvImJ_T0043718.1 MGP_129S1SvImJ_G0022644.1 mouse_genomes_project 16 17873984 17883413 + MGP_129S1SvImJ_P0043718 Ap2m1 protein_coding protein_coding MGP_129S1SvImJ_T0043719.1 MGP_129S1SvImJ_G0022644.1 mouse_genomes_project 16 17874053 17876343 + Ap2m1 protein_coding retained_intron MGP_129S1SvImJ_T0043720.1 MGP_129S1SvImJ_G0022644.1 mouse_genomes_project 16 17878480 17880737 + Ap2m1 protein_coding processed_transcript MGP_129S1SvImJ_T0043721.1 MGP_129S1SvImJ_G0022644.1 mouse_genomes_project 16 17879126 17880500 + Ap2m1 protein_coding retained_intron MGP_129S1SvImJ_T0043722.1 MGP_129S1SvImJ_G0022644.1 mouse_genomes_project 16 17879256 17880375 + Ap2m1 protein_coding retained_intron MGP_129S1SvImJ_T0043723.1 MGP_129S1SvImJ_G0022644.1 mouse_genomes_project 16 17879476 17880178 + Ap2m1 protein_coding retained_intron MGP_129S1SvImJ_T0043724.1 MGP_129S1SvImJ_G0022644.1 mouse_genomes_project 16 17880539 17881174 + Ap2m1 protein_coding retained_intron MGP_129S1SvImJ_T0043042.1 MGP_129S1SvImJ_G0022484.1 mouse_genomes_project 16 1619052 1665956 - MGP_129S1SvImJ_P0043042 Ppl protein_coding protein_coding MGP_129S1SvImJ_T0013224.1 MGP_129S1SvImJ_G0011313.1 mouse_genomes_project 16 92526580 92527965 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0043063.1 MGP_129S1SvImJ_G0022492.1 mouse_genomes_project 16 5121654 5143785 + MGP_129S1SvImJ_P0043063 Mettl22 protein_coding protein_coding MGP_129S1SvImJ_T0043064.1 MGP_129S1SvImJ_G0022492.1 mouse_genomes_project 16 5121657 5141783 + MGP_129S1SvImJ_P0043064 Mettl22 protein_coding protein_coding MGP_129S1SvImJ_T0043065.1 MGP_129S1SvImJ_G0022492.1 mouse_genomes_project 16 5121670 5137432 + MGP_129S1SvImJ_P0043065 Mettl22 protein_coding protein_coding MGP_129S1SvImJ_T0043066.1 MGP_129S1SvImJ_G0022492.1 mouse_genomes_project 16 5138666 5141944 + Mettl22 protein_coding retained_intron MGP_129S1SvImJ_T0043067.1 MGP_129S1SvImJ_G0022492.1 mouse_genomes_project 16 5139934 5143297 + Mettl22 protein_coding retained_intron MGP_129S1SvImJ_T0013151.1 MGP_129S1SvImJ_G0011240.1 mouse_genomes_project 16 11096920 11097524 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0045180.1 MGP_129S1SvImJ_G0023051.1 mouse_genomes_project 16 93122114 93176987 + MGP_129S1SvImJ_P0045180 Mrps6 protein_coding protein_coding MGP_129S1SvImJ_T0045183.1 MGP_129S1SvImJ_G0023051.1 mouse_genomes_project 16 93171012 93176987 + Mrps6 protein_coding processed_transcript MGP_129S1SvImJ_T0100776.1 MGP_129S1SvImJ_G0038843.1 mouse_genomes_project 16 20671914 20672043 + Gm26447 snoRNA snoRNA MGP_129S1SvImJ_T0013194.1 MGP_129S1SvImJ_G0011283.1 mouse_genomes_project 16 42006774 42007300 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000016.1 MGP_129S1SvImJ_G0000011.1 mouse_genomes_project 16 16333917 16334371 - MGP_129S1SvImJ_P0000016 Iglc1 IG_C_gene IG_C_gene MGP_129S1SvImJ_T0006849.1 MGP_129S1SvImJ_G0005650.1 mouse_genomes_project 16 22022547 22024524 - Lppos lincRNA lincRNA MGP_129S1SvImJ_T0044777.1 MGP_129S1SvImJ_G0022913.1 mouse_genomes_project 16 58128265 58145004 - MGP_129S1SvImJ_P0044777 Olfr180 protein_coding protein_coding MGP_129S1SvImJ_T0044778.1 MGP_129S1SvImJ_G0022913.1 mouse_genomes_project 16 58131081 58133894 - MGP_129S1SvImJ_P0044778 Olfr180 protein_coding protein_coding MGP_129S1SvImJ_T0044779.1 MGP_129S1SvImJ_G0022913.1 mouse_genomes_project 16 58131629 58133894 - MGP_129S1SvImJ_P0044779 Olfr180 protein_coding protein_coding MGP_129S1SvImJ_T0045314.1 MGP_129S1SvImJ_G0023078.1 mouse_genomes_project 16 97327638 97340753 - MGP_129S1SvImJ_P0045314 Psmg1 protein_coding protein_coding MGP_129S1SvImJ_T0045315.1 MGP_129S1SvImJ_G0023078.1 mouse_genomes_project 16 97327742 97340683 - MGP_129S1SvImJ_P0045315 Psmg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045316.1 MGP_129S1SvImJ_G0023078.1 mouse_genomes_project 16 97327742 97340683 - MGP_129S1SvImJ_P0045316 Psmg1 protein_coding protein_coding MGP_129S1SvImJ_T0045317.1 MGP_129S1SvImJ_G0023078.1 mouse_genomes_project 16 97337778 97339691 - Psmg1 protein_coding retained_intron MGP_129S1SvImJ_T0000999.1 MGP_129S1SvImJ_G0000929.1 mouse_genomes_project 16 77817602 77819734 + TEC TEC MGP_129S1SvImJ_T0000985.1 MGP_129S1SvImJ_G0000916.1 mouse_genomes_project 16 76167910 76169570 + TEC TEC MGP_129S1SvImJ_T0011435.1 MGP_129S1SvImJ_G0009551.1 mouse_genomes_project 16 68627077 68627363 + Gm23591 misc_RNA misc_RNA MGP_129S1SvImJ_T0098323.1 MGP_129S1SvImJ_G0036408.1 mouse_genomes_project 16 29951012 29951437 - pseudogene pseudogene MGP_129S1SvImJ_T0043650.1 MGP_129S1SvImJ_G0022623.1 mouse_genomes_project 16 16143453 16196242 + MGP_129S1SvImJ_P0043650 Hira protein_coding protein_coding MGP_129S1SvImJ_T0043651.1 MGP_129S1SvImJ_G0022623.1 mouse_genomes_project 16 16143482 16239844 + MGP_129S1SvImJ_P0043651 Hira protein_coding protein_coding MGP_129S1SvImJ_T0043652.1 MGP_129S1SvImJ_G0022623.1 mouse_genomes_project 16 16143686 16179461 + Hira protein_coding retained_intron MGP_129S1SvImJ_T0043653.1 MGP_129S1SvImJ_G0022623.1 mouse_genomes_project 16 16143686 16203176 + MGP_129S1SvImJ_P0043653 Hira protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043654.1 MGP_129S1SvImJ_G0022623.1 mouse_genomes_project 16 16143828 16184798 + Hira protein_coding retained_intron MGP_129S1SvImJ_T0043655.1 MGP_129S1SvImJ_G0022623.1 mouse_genomes_project 16 16191284 16193869 + Hira protein_coding processed_transcript MGP_129S1SvImJ_T0043656.1 MGP_129S1SvImJ_G0022623.1 mouse_genomes_project 16 16193788 16203231 + Hira protein_coding retained_intron MGP_129S1SvImJ_T0043657.1 MGP_129S1SvImJ_G0022623.1 mouse_genomes_project 16 16201108 16215614 + Hira protein_coding processed_transcript MGP_129S1SvImJ_T0043495.1 MGP_129S1SvImJ_G0022588.1 mouse_genomes_project 16 14817149 14820095 + Ccdc74a protein_coding retained_intron MGP_129S1SvImJ_T0043496.1 MGP_129S1SvImJ_G0022588.1 mouse_genomes_project 16 14817154 14821418 + MGP_129S1SvImJ_P0043496 Ccdc74a protein_coding protein_coding MGP_129S1SvImJ_T0043497.1 MGP_129S1SvImJ_G0022588.1 mouse_genomes_project 16 14817154 14819921 + MGP_129S1SvImJ_P0043497 Ccdc74a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043498.1 MGP_129S1SvImJ_G0022588.1 mouse_genomes_project 16 14817230 14819153 + Ccdc74a protein_coding retained_intron MGP_129S1SvImJ_T0043499.1 MGP_129S1SvImJ_G0022588.1 mouse_genomes_project 16 14817243 14821417 + MGP_129S1SvImJ_P0043499 Ccdc74a protein_coding protein_coding MGP_129S1SvImJ_T0043500.1 MGP_129S1SvImJ_G0022588.1 mouse_genomes_project 16 14817244 14821089 + MGP_129S1SvImJ_P0043500 Ccdc74a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043501.1 MGP_129S1SvImJ_G0022588.1 mouse_genomes_project 16 14817292 14821418 + MGP_129S1SvImJ_P0043501 Ccdc74a protein_coding protein_coding MGP_129S1SvImJ_T0043502.1 MGP_129S1SvImJ_G0022588.1 mouse_genomes_project 16 14817297 14821127 + MGP_129S1SvImJ_P0043502 Ccdc74a protein_coding protein_coding MGP_129S1SvImJ_T0043503.1 MGP_129S1SvImJ_G0022588.1 mouse_genomes_project 16 14817352 14818541 + Ccdc74a protein_coding retained_intron MGP_129S1SvImJ_T0043504.1 MGP_129S1SvImJ_G0022588.1 mouse_genomes_project 16 14817379 14821418 + MGP_129S1SvImJ_P0043504 Ccdc74a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044830.1 MGP_129S1SvImJ_G0022936.1 mouse_genomes_project 16 62220311 62229957 + MGP_129S1SvImJ_P0044830 Stx19 protein_coding protein_coding MGP_129S1SvImJ_T0044795.1 MGP_129S1SvImJ_G0022921.1 mouse_genomes_project 16 58399470 58400465 + MGP_129S1SvImJ_P0044795 Olfr195 protein_coding protein_coding MGP_129S1SvImJ_T0006844.1 MGP_129S1SvImJ_G0005647.1 mouse_genomes_project 16 19231185 19242924 + 1300002E11Rik lincRNA lincRNA MGP_129S1SvImJ_T0006845.1 MGP_129S1SvImJ_G0005647.1 mouse_genomes_project 16 19231200 19245728 + 1300002E11Rik lincRNA lincRNA MGP_129S1SvImJ_T0006846.1 MGP_129S1SvImJ_G0005647.1 mouse_genomes_project 16 19231230 19242924 + 1300002E11Rik lincRNA lincRNA MGP_129S1SvImJ_T0044730.1 MGP_129S1SvImJ_G0022897.1 mouse_genomes_project 16 56415183 56442836 - MGP_129S1SvImJ_P0044730 Tmem30c protein_coding protein_coding MGP_129S1SvImJ_T0044731.1 MGP_129S1SvImJ_G0022897.1 mouse_genomes_project 16 56415475 56442822 - MGP_129S1SvImJ_P0044731 Tmem30c protein_coding protein_coding MGP_129S1SvImJ_T0044732.1 MGP_129S1SvImJ_G0022897.1 mouse_genomes_project 16 56418370 56442822 - MGP_129S1SvImJ_P0044732 Tmem30c protein_coding protein_coding MGP_129S1SvImJ_T0006891.1 MGP_129S1SvImJ_G0005681.1 mouse_genomes_project 16 94536369 94574224 - 1700029J03Rik lincRNA lincRNA MGP_129S1SvImJ_T0006892.1 MGP_129S1SvImJ_G0005681.1 mouse_genomes_project 16 94541432 94612029 - 1700029J03Rik lincRNA lincRNA MGP_129S1SvImJ_T0003710.1 MGP_129S1SvImJ_G0003354.1 mouse_genomes_project 16 55068923 55070274 - Zbtb11os1 antisense antisense MGP_129S1SvImJ_T0044276.1 MGP_129S1SvImJ_G0022780.1 mouse_genomes_project 16 34529980 34537223 + MGP_129S1SvImJ_P0044276 Stfa2l1 protein_coding protein_coding MGP_129S1SvImJ_T0043860.1 MGP_129S1SvImJ_G0022674.1 mouse_genomes_project 16 20420644 20429667 + MGP_129S1SvImJ_P0043860 Ahsg protein_coding protein_coding MGP_129S1SvImJ_T0000019.1 MGP_129S1SvImJ_G0000014.1 mouse_genomes_project 16 16478887 16479345 - MGP_129S1SvImJ_P0000019 Iglc2 IG_C_gene IG_C_gene MGP_129S1SvImJ_T0000020.1 MGP_129S1SvImJ_G0000014.1 mouse_genomes_project 16 16478892 16480843 - MGP_129S1SvImJ_P0000020 Iglc2 IG_C_gene IG_C_gene MGP_129S1SvImJ_T0043977.1 MGP_129S1SvImJ_G0022708.1 mouse_genomes_project 16 27933728 27934914 + Hes1 protein_coding processed_transcript MGP_129S1SvImJ_T0043978.1 MGP_129S1SvImJ_G0022708.1 mouse_genomes_project 16 27934684 27937142 + MGP_129S1SvImJ_P0043978 Hes1 protein_coding protein_coding MGP_129S1SvImJ_T0043979.1 MGP_129S1SvImJ_G0022708.1 mouse_genomes_project 16 27935442 27936469 + Hes1 protein_coding retained_intron MGP_129S1SvImJ_T0043980.1 MGP_129S1SvImJ_G0022708.1 mouse_genomes_project 16 27935683 27936665 + Hes1 protein_coding processed_transcript MGP_129S1SvImJ_T0043664.1 MGP_129S1SvImJ_G0022629.1 mouse_genomes_project 16 16839965 16840462 - MGP_129S1SvImJ_P0043664 protein_coding protein_coding MGP_129S1SvImJ_T0043981.1 MGP_129S1SvImJ_G0022709.1 mouse_genomes_project 16 28143861 28157256 - MGP_129S1SvImJ_P0043981 Cpn2 protein_coding protein_coding MGP_129S1SvImJ_T0013147.1 MGP_129S1SvImJ_G0011236.1 mouse_genomes_project 16 9707649 9708984 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0044618.1 MGP_129S1SvImJ_G0022863.1 mouse_genomes_project 16 47128922 47140611 + MGP_129S1SvImJ_P0044618 Dppa4 protein_coding protein_coding MGP_129S1SvImJ_T0044619.1 MGP_129S1SvImJ_G0022863.1 mouse_genomes_project 16 47128922 47140611 + MGP_129S1SvImJ_P0044619 Dppa4 protein_coding protein_coding MGP_129S1SvImJ_T0044134.1 MGP_129S1SvImJ_G0022747.1 mouse_genomes_project 16 30939002 30993992 - MGP_129S1SvImJ_P0044134 Rubcn protein_coding protein_coding MGP_129S1SvImJ_T0044135.1 MGP_129S1SvImJ_G0022747.1 mouse_genomes_project 16 30939006 30942220 - Rubcn protein_coding retained_intron MGP_129S1SvImJ_T0044136.1 MGP_129S1SvImJ_G0022747.1 mouse_genomes_project 16 30939006 30993965 - MGP_129S1SvImJ_P0044136 Rubcn protein_coding protein_coding MGP_129S1SvImJ_T0044137.1 MGP_129S1SvImJ_G0022747.1 mouse_genomes_project 16 30939019 30993765 - MGP_129S1SvImJ_P0044137 Rubcn protein_coding protein_coding MGP_129S1SvImJ_T0044138.1 MGP_129S1SvImJ_G0022747.1 mouse_genomes_project 16 30939027 30993977 - MGP_129S1SvImJ_P0044138 Rubcn protein_coding protein_coding MGP_129S1SvImJ_T0044139.1 MGP_129S1SvImJ_G0022747.1 mouse_genomes_project 16 30940766 30955894 - Rubcn protein_coding retained_intron MGP_129S1SvImJ_T0044140.1 MGP_129S1SvImJ_G0022747.1 mouse_genomes_project 16 30945227 30947018 - Rubcn protein_coding retained_intron MGP_129S1SvImJ_T0044141.1 MGP_129S1SvImJ_G0022747.1 mouse_genomes_project 16 30952824 30953871 - Rubcn protein_coding retained_intron MGP_129S1SvImJ_T0044142.1 MGP_129S1SvImJ_G0022747.1 mouse_genomes_project 16 30987267 30993964 - Rubcn protein_coding processed_transcript MGP_129S1SvImJ_T0043237.1 MGP_129S1SvImJ_G0022537.1 mouse_genomes_project 16 10836102 10926346 - MGP_129S1SvImJ_P0043237 Pdxdc1 protein_coding protein_coding MGP_129S1SvImJ_T0043238.1 MGP_129S1SvImJ_G0022537.1 mouse_genomes_project 16 10836532 10853276 - Pdxdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0043240.1 MGP_129S1SvImJ_G0022537.1 mouse_genomes_project 16 10846165 10858379 - Pdxdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0043241.1 MGP_129S1SvImJ_G0022537.1 mouse_genomes_project 16 10846170 10926240 - MGP_129S1SvImJ_P0043241 Pdxdc1 protein_coding protein_coding MGP_129S1SvImJ_T0043242.1 MGP_129S1SvImJ_G0022537.1 mouse_genomes_project 16 10846286 10850030 - Pdxdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0043243.1 MGP_129S1SvImJ_G0022537.1 mouse_genomes_project 16 10848540 10926201 - Pdxdc1 protein_coding retained_intron MGP_129S1SvImJ_T0043244.1 MGP_129S1SvImJ_G0022537.1 mouse_genomes_project 16 10848755 10852285 - Pdxdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0043245.1 MGP_129S1SvImJ_G0022537.1 mouse_genomes_project 16 10849904 10853281 - Pdxdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0043246.1 MGP_129S1SvImJ_G0022537.1 mouse_genomes_project 16 10850581 10851310 - Pdxdc1 protein_coding retained_intron MGP_129S1SvImJ_T0043247.1 MGP_129S1SvImJ_G0022537.1 mouse_genomes_project 16 10860661 10926274 - MGP_129S1SvImJ_P0043247 Pdxdc1 protein_coding protein_coding MGP_129S1SvImJ_T0043248.1 MGP_129S1SvImJ_G0022537.1 mouse_genomes_project 16 10862225 10926350 - MGP_129S1SvImJ_P0043248 Pdxdc1 protein_coding protein_coding MGP_129S1SvImJ_T0043249.1 MGP_129S1SvImJ_G0022537.1 mouse_genomes_project 16 10875897 10894576 - Pdxdc1 protein_coding retained_intron MGP_129S1SvImJ_T0043250.1 MGP_129S1SvImJ_G0022537.1 mouse_genomes_project 16 10894406 10926204 - Pdxdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0043251.1 MGP_129S1SvImJ_G0022537.1 mouse_genomes_project 16 10900037 10926194 - Pdxdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0043252.1 MGP_129S1SvImJ_G0022537.1 mouse_genomes_project 16 10908241 10926199 - Pdxdc1 protein_coding retained_intron MGP_129S1SvImJ_T0102269.1 MGP_129S1SvImJ_G0040103.1 mouse_genomes_project 16 10942706 10944679 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0045082.1 MGP_129S1SvImJ_G0023034.1 mouse_genomes_project 16 92035505 92050945 - MGP_129S1SvImJ_P0045082 4932438H23Rik protein_coding protein_coding MGP_129S1SvImJ_T0045083.1 MGP_129S1SvImJ_G0023034.1 mouse_genomes_project 16 92035505 92050945 - MGP_129S1SvImJ_P0045083 4932438H23Rik protein_coding protein_coding MGP_129S1SvImJ_T0045084.1 MGP_129S1SvImJ_G0023034.1 mouse_genomes_project 16 92037409 92078930 - MGP_129S1SvImJ_P0045084 4932438H23Rik protein_coding protein_coding MGP_129S1SvImJ_T0044773.1 MGP_129S1SvImJ_G0022911.1 mouse_genomes_project 16 58095506 58097371 - MGP_129S1SvImJ_P0044773 Olfr177 protein_coding protein_coding MGP_129S1SvImJ_T0044774.1 MGP_129S1SvImJ_G0022911.1 mouse_genomes_project 16 58095506 58096543 - MGP_129S1SvImJ_P0044774 Olfr177 protein_coding protein_coding MGP_129S1SvImJ_T0043012.1 MGP_129S1SvImJ_G0022474.1 mouse_genomes_project 16 1389192 1394718 - MGP_129S1SvImJ_P0043012 Ubald1 protein_coding protein_coding MGP_129S1SvImJ_T0043013.1 MGP_129S1SvImJ_G0022474.1 mouse_genomes_project 16 1389202 1394217 - Ubald1 protein_coding retained_intron MGP_129S1SvImJ_T0042963.1 MGP_129S1SvImJ_G0022465.1 mouse_genomes_project 16 1090551 1115640 + MGP_129S1SvImJ_P0042963 Glis2 protein_coding protein_coding MGP_129S1SvImJ_T0042964.1 MGP_129S1SvImJ_G0022465.1 mouse_genomes_project 16 1096970 1110096 + MGP_129S1SvImJ_P0042964 Glis2 protein_coding protein_coding MGP_129S1SvImJ_T0042965.1 MGP_129S1SvImJ_G0022465.1 mouse_genomes_project 16 1108349 1115625 + Glis2 protein_coding retained_intron MGP_129S1SvImJ_T0042966.1 MGP_129S1SvImJ_G0022465.1 mouse_genomes_project 16 1111092 1113339 + Glis2 protein_coding retained_intron MGP_129S1SvImJ_T0042967.1 MGP_129S1SvImJ_G0022465.1 mouse_genomes_project 16 1111310 1126217 + Glis2 protein_coding processed_transcript MGP_129S1SvImJ_T0045006.1 MGP_129S1SvImJ_G0023011.1 mouse_genomes_project 16 89926264 89926784 + MGP_129S1SvImJ_P0045006 Krtap6-3 protein_coding protein_coding MGP_129S1SvImJ_T0045007.1 MGP_129S1SvImJ_G0023011.1 mouse_genomes_project 16 89926340 89926784 + MGP_129S1SvImJ_P0045007 Krtap6-3 protein_coding protein_coding MGP_129S1SvImJ_T0043683.1 MGP_129S1SvImJ_G0022638.1 mouse_genomes_project 16 17523969 17552312 - MGP_129S1SvImJ_P0043683 Map6d1 protein_coding protein_coding MGP_129S1SvImJ_T0043126.1 MGP_129S1SvImJ_G0022509.1 mouse_genomes_project 16 7308575 7351217 - MGP_129S1SvImJ_P0043126 Dexi protein_coding protein_coding MGP_129S1SvImJ_T0043127.1 MGP_129S1SvImJ_G0022509.1 mouse_genomes_project 16 7338367 7339970 - Dexi protein_coding processed_transcript MGP_129S1SvImJ_T0043128.1 MGP_129S1SvImJ_G0022509.1 mouse_genomes_project 16 7338367 7351217 - MGP_129S1SvImJ_P0043128 Dexi protein_coding protein_coding MGP_129S1SvImJ_T0003694.1 MGP_129S1SvImJ_G0003341.1 mouse_genomes_project 16 32210144 32211218 + Gm15829 antisense antisense MGP_129S1SvImJ_T0100810.1 MGP_129S1SvImJ_G0038877.1 mouse_genomes_project 16 87580377 87580502 + Gm25715 snoRNA snoRNA MGP_129S1SvImJ_T0006856.1 MGP_129S1SvImJ_G0005657.1 mouse_genomes_project 16 31574870 31575743 - 1700007L15Rik lincRNA lincRNA MGP_129S1SvImJ_T0044804.1 MGP_129S1SvImJ_G0022930.1 mouse_genomes_project 16 58751316 58772159 + MGP_129S1SvImJ_P0044804 Mina protein_coding protein_coding MGP_129S1SvImJ_T0044805.1 MGP_129S1SvImJ_G0022930.1 mouse_genomes_project 16 58751345 58757107 + MGP_129S1SvImJ_P0044805 Mina protein_coding protein_coding MGP_129S1SvImJ_T0044806.1 MGP_129S1SvImJ_G0022930.1 mouse_genomes_project 16 58751363 58771366 + MGP_129S1SvImJ_P0044806 Mina protein_coding protein_coding MGP_129S1SvImJ_T0044807.1 MGP_129S1SvImJ_G0022930.1 mouse_genomes_project 16 58751609 58771989 + MGP_129S1SvImJ_P0044807 Mina protein_coding protein_coding MGP_129S1SvImJ_T0044808.1 MGP_129S1SvImJ_G0022930.1 mouse_genomes_project 16 58751884 58755298 + MGP_129S1SvImJ_P0044808 Mina protein_coding protein_coding MGP_129S1SvImJ_T0044809.1 MGP_129S1SvImJ_G0022930.1 mouse_genomes_project 16 58767238 58769520 + Mina protein_coding retained_intron MGP_129S1SvImJ_T0043750.1 MGP_129S1SvImJ_G0022649.1 mouse_genomes_project 16 17956621 17958694 - MGP_129S1SvImJ_P0043750 Camk2n2 protein_coding protein_coding MGP_129S1SvImJ_T0044917.1 MGP_129S1SvImJ_G0022969.1 mouse_genomes_project 16 85410042 85417524 - MGP_129S1SvImJ_P0044917 Atp5j protein_coding protein_coding MGP_129S1SvImJ_T0044918.1 MGP_129S1SvImJ_G0022969.1 mouse_genomes_project 16 85410047 85410990 - Atp5j protein_coding retained_intron MGP_129S1SvImJ_T0044919.1 MGP_129S1SvImJ_G0022969.1 mouse_genomes_project 16 85410047 85418788 - MGP_129S1SvImJ_P0044919 Atp5j protein_coding protein_coding MGP_129S1SvImJ_T0044920.1 MGP_129S1SvImJ_G0022969.1 mouse_genomes_project 16 85410047 85418910 - MGP_129S1SvImJ_P0044920 Atp5j protein_coding protein_coding MGP_129S1SvImJ_T0044921.1 MGP_129S1SvImJ_G0022969.1 mouse_genomes_project 16 85410050 85414892 - Atp5j protein_coding retained_intron MGP_129S1SvImJ_T0044922.1 MGP_129S1SvImJ_G0022969.1 mouse_genomes_project 16 85410615 85418887 - MGP_129S1SvImJ_P0044922 Atp5j protein_coding protein_coding MGP_129S1SvImJ_T0044923.1 MGP_129S1SvImJ_G0022969.1 mouse_genomes_project 16 85411724 85417161 - Atp5j protein_coding processed_transcript MGP_129S1SvImJ_T0044924.1 MGP_129S1SvImJ_G0022969.1 mouse_genomes_project 16 85414355 85418583 - Atp5j protein_coding retained_intron MGP_129S1SvImJ_T0044925.1 MGP_129S1SvImJ_G0022969.1 mouse_genomes_project 16 85414613 85418440 - Atp5j protein_coding processed_transcript MGP_129S1SvImJ_T0044926.1 MGP_129S1SvImJ_G0022969.1 mouse_genomes_project 16 85414653 85418290 - Atp5j protein_coding processed_transcript MGP_129S1SvImJ_T0044927.1 MGP_129S1SvImJ_G0022969.1 mouse_genomes_project 16 85416807 85418117 - Atp5j protein_coding retained_intron MGP_129S1SvImJ_T0044928.1 MGP_129S1SvImJ_G0022969.1 mouse_genomes_project 16 85417560 85418814 - Atp5j protein_coding retained_intron MGP_129S1SvImJ_T0043181.1 MGP_129S1SvImJ_G0022522.1 mouse_genomes_project 16 8055473 8067863 - MGP_129S1SvImJ_P0043181 Rsl1d1 protein_coding protein_coding MGP_129S1SvImJ_T0043182.1 MGP_129S1SvImJ_G0022522.1 mouse_genomes_project 16 8056008 8057499 - Rsl1d1 protein_coding retained_intron MGP_129S1SvImJ_T0043183.1 MGP_129S1SvImJ_G0022522.1 mouse_genomes_project 16 8058947 8067796 - Rsl1d1 protein_coding retained_intron MGP_129S1SvImJ_T0045104.1 MGP_129S1SvImJ_G0023042.1 mouse_genomes_project 16 92568697 92586422 + MGP_129S1SvImJ_P0045104 Ifngr2 protein_coding protein_coding MGP_129S1SvImJ_T0045105.1 MGP_129S1SvImJ_G0023042.1 mouse_genomes_project 16 92568772 92581902 + MGP_129S1SvImJ_P0045105 Ifngr2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045106.1 MGP_129S1SvImJ_G0023042.1 mouse_genomes_project 16 92582575 92586422 + Ifngr2 protein_coding processed_transcript MGP_129S1SvImJ_T0044444.1 MGP_129S1SvImJ_G0022826.1 mouse_genomes_project 16 40924107 41021468 - MGP_129S1SvImJ_P0044444 Gap43 protein_coding protein_coding MGP_129S1SvImJ_T0044445.1 MGP_129S1SvImJ_G0022826.1 mouse_genomes_project 16 40924123 40955747 - Gap43 protein_coding processed_transcript MGP_129S1SvImJ_T0010171.1 MGP_129S1SvImJ_G0008287.1 mouse_genomes_project 16 74291016 74291094 - Mir691 miRNA miRNA MGP_129S1SvImJ_T0013190.1 MGP_129S1SvImJ_G0011279.1 mouse_genomes_project 16 38520460 38521458 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102267.1 MGP_129S1SvImJ_G0040101.1 mouse_genomes_project 16 48807 49741 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0043263.1 MGP_129S1SvImJ_G0022542.1 mouse_genomes_project 16 11211892 11241231 + MGP_129S1SvImJ_P0043263 Nde1 protein_coding protein_coding MGP_129S1SvImJ_T0043264.1 MGP_129S1SvImJ_G0022542.1 mouse_genomes_project 16 11211904 11241131 + MGP_129S1SvImJ_P0043264 Nde1 protein_coding protein_coding MGP_129S1SvImJ_T0043265.1 MGP_129S1SvImJ_G0022542.1 mouse_genomes_project 16 11211915 11241221 + MGP_129S1SvImJ_P0043265 Nde1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043266.1 MGP_129S1SvImJ_G0022542.1 mouse_genomes_project 16 11211921 11219447 + Nde1 protein_coding retained_intron MGP_129S1SvImJ_T0043267.1 MGP_129S1SvImJ_G0022542.1 mouse_genomes_project 16 11211962 11241221 + MGP_129S1SvImJ_P0043267 Nde1 protein_coding protein_coding MGP_129S1SvImJ_T0043268.1 MGP_129S1SvImJ_G0022542.1 mouse_genomes_project 16 11211966 11238743 + Nde1 protein_coding processed_transcript MGP_129S1SvImJ_T0043269.1 MGP_129S1SvImJ_G0022542.1 mouse_genomes_project 16 11223448 11236718 + Nde1 protein_coding retained_intron MGP_129S1SvImJ_T0043270.1 MGP_129S1SvImJ_G0022542.1 mouse_genomes_project 16 11231884 11238823 + MGP_129S1SvImJ_P0043270 Nde1 protein_coding protein_coding MGP_129S1SvImJ_T0006835.1 MGP_129S1SvImJ_G0005639.1 mouse_genomes_project 16 8034028 8054796 + 4930509G22Rik lincRNA lincRNA MGP_129S1SvImJ_T0045086.1 MGP_129S1SvImJ_G0023036.1 mouse_genomes_project 16 92224609 92227737 + MGP_129S1SvImJ_P0045086 Olig2 protein_coding protein_coding MGP_129S1SvImJ_T0017532.1 MGP_129S1SvImJ_G0015321.1 mouse_genomes_project 16 57571448 57574847 - 4930461C15Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0044359.1 MGP_129S1SvImJ_G0022801.1 mouse_genomes_project 16 36006213 36040427 + MGP_129S1SvImJ_P0044359 Rabl3 protein_coding protein_coding MGP_129S1SvImJ_T0044360.1 MGP_129S1SvImJ_G0022801.1 mouse_genomes_project 16 36006228 36040424 + MGP_129S1SvImJ_P0044360 Rabl3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044361.1 MGP_129S1SvImJ_G0022801.1 mouse_genomes_project 16 36006233 36032090 + Rabl3 protein_coding retained_intron MGP_129S1SvImJ_T0044362.1 MGP_129S1SvImJ_G0022801.1 mouse_genomes_project 16 36031775 36035983 + Rabl3 protein_coding retained_intron MGP_129S1SvImJ_T0043699.1 MGP_129S1SvImJ_G0022641.1 mouse_genomes_project 16 17646995 17748768 - MGP_129S1SvImJ_P0043699 Abcc5 protein_coding protein_coding MGP_129S1SvImJ_T0043700.1 MGP_129S1SvImJ_G0022641.1 mouse_genomes_project 16 17646998 17748709 - MGP_129S1SvImJ_P0043700 Abcc5 protein_coding protein_coding MGP_129S1SvImJ_T0043701.1 MGP_129S1SvImJ_G0022641.1 mouse_genomes_project 16 17647000 17720132 - Abcc5 protein_coding retained_intron MGP_129S1SvImJ_T0043702.1 MGP_129S1SvImJ_G0022641.1 mouse_genomes_project 16 17655483 17681133 - Abcc5 protein_coding processed_transcript MGP_129S1SvImJ_T0043703.1 MGP_129S1SvImJ_G0022641.1 mouse_genomes_project 16 17661186 17681327 - Abcc5 protein_coding retained_intron MGP_129S1SvImJ_T0043704.1 MGP_129S1SvImJ_G0022641.1 mouse_genomes_project 16 17686003 17697189 - Abcc5 protein_coding retained_intron MGP_129S1SvImJ_T0043705.1 MGP_129S1SvImJ_G0022641.1 mouse_genomes_project 16 17699030 17716914 - Abcc5 protein_coding retained_intron MGP_129S1SvImJ_T0043706.1 MGP_129S1SvImJ_G0022641.1 mouse_genomes_project 16 17713185 17748360 - MGP_129S1SvImJ_P0043706 Abcc5 protein_coding protein_coding MGP_129S1SvImJ_T0043707.1 MGP_129S1SvImJ_G0022641.1 mouse_genomes_project 16 17719327 17720797 - Abcc5 protein_coding retained_intron MGP_129S1SvImJ_T0043708.1 MGP_129S1SvImJ_G0022641.1 mouse_genomes_project 16 17721270 17748698 - Abcc5 protein_coding retained_intron MGP_129S1SvImJ_T0043709.1 MGP_129S1SvImJ_G0022641.1 mouse_genomes_project 16 17721271 17748728 - MGP_129S1SvImJ_P0043709 Abcc5 protein_coding protein_coding MGP_129S1SvImJ_T0043710.1 MGP_129S1SvImJ_G0022641.1 mouse_genomes_project 16 17721272 17725225 - Abcc5 protein_coding processed_transcript MGP_129S1SvImJ_T0044866.1 MGP_129S1SvImJ_G0022951.1 mouse_genomes_project 16 73822304 74360664 - MGP_129S1SvImJ_P0044866 Robo2 protein_coding protein_coding MGP_129S1SvImJ_T0044867.1 MGP_129S1SvImJ_G0022951.1 mouse_genomes_project 16 73824353 74360967 - MGP_129S1SvImJ_P0044867 Robo2 protein_coding protein_coding MGP_129S1SvImJ_T0044868.1 MGP_129S1SvImJ_G0022951.1 mouse_genomes_project 16 73824662 73829886 - Robo2 protein_coding retained_intron MGP_129S1SvImJ_T0044869.1 MGP_129S1SvImJ_G0022951.1 mouse_genomes_project 16 73825824 74360587 - MGP_129S1SvImJ_P0044869 Robo2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0044870.1 MGP_129S1SvImJ_G0022951.1 mouse_genomes_project 16 73827029 73836999 - Robo2 protein_coding processed_transcript MGP_129S1SvImJ_T0044871.1 MGP_129S1SvImJ_G0022951.1 mouse_genomes_project 16 73851988 74361460 - MGP_129S1SvImJ_P0044871 Robo2 protein_coding protein_coding MGP_129S1SvImJ_T0044872.1 MGP_129S1SvImJ_G0022951.1 mouse_genomes_project 16 73852243 73866651 - Robo2 protein_coding retained_intron MGP_129S1SvImJ_T0044873.1 MGP_129S1SvImJ_G0022951.1 mouse_genomes_project 16 73918520 73959069 - Robo2 protein_coding processed_transcript MGP_129S1SvImJ_T0044874.1 MGP_129S1SvImJ_G0022951.1 mouse_genomes_project 16 73975195 74361112 - Robo2 protein_coding retained_intron MGP_129S1SvImJ_T0044875.1 MGP_129S1SvImJ_G0022951.1 mouse_genomes_project 16 74299615 74361500 - Robo2 protein_coding retained_intron MGP_129S1SvImJ_T0043957.1 MGP_129S1SvImJ_G0022705.1 mouse_genomes_project 16 27243331 27291649 - MGP_129S1SvImJ_P0043957 Atp13a4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043958.1 MGP_129S1SvImJ_G0022705.1 mouse_genomes_project 16 27243506 27373832 - MGP_129S1SvImJ_P0043958 Atp13a4 protein_coding protein_coding MGP_129S1SvImJ_T0043959.1 MGP_129S1SvImJ_G0022705.1 mouse_genomes_project 16 27243518 27373718 - MGP_129S1SvImJ_P0043959 Atp13a4 protein_coding protein_coding MGP_129S1SvImJ_T0043960.1 MGP_129S1SvImJ_G0022705.1 mouse_genomes_project 16 27243524 27255785 - Atp13a4 protein_coding processed_transcript MGP_129S1SvImJ_T0043961.1 MGP_129S1SvImJ_G0022705.1 mouse_genomes_project 16 27243564 27377057 - MGP_129S1SvImJ_P0043961 Atp13a4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043962.1 MGP_129S1SvImJ_G0022705.1 mouse_genomes_project 16 27243890 27255202 - Atp13a4 protein_coding retained_intron MGP_129S1SvImJ_T0043963.1 MGP_129S1SvImJ_G0022705.1 mouse_genomes_project 16 27256127 27281772 - Atp13a4 protein_coding retained_intron MGP_129S1SvImJ_T0043964.1 MGP_129S1SvImJ_G0022705.1 mouse_genomes_project 16 27268427 27282815 - MGP_129S1SvImJ_P0043964 Atp13a4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043965.1 MGP_129S1SvImJ_G0022705.1 mouse_genomes_project 16 27268436 27377057 - MGP_129S1SvImJ_P0043965 Atp13a4 protein_coding protein_coding MGP_129S1SvImJ_T0043966.1 MGP_129S1SvImJ_G0022705.1 mouse_genomes_project 16 27372658 27376991 - Atp13a4 protein_coding retained_intron MGP_129S1SvImJ_T0043967.1 MGP_129S1SvImJ_G0022705.1 mouse_genomes_project 16 27372711 27377052 - Atp13a4 protein_coding retained_intron MGP_129S1SvImJ_T0043910.1 MGP_129S1SvImJ_G0022688.1 mouse_genomes_project 16 21570538 21594975 - MGP_129S1SvImJ_P0043910 Bcl6 protein_coding protein_coding MGP_129S1SvImJ_T0043911.1 MGP_129S1SvImJ_G0022688.1 mouse_genomes_project 16 21573846 21578533 - Bcl6 protein_coding retained_intron MGP_129S1SvImJ_T0044727.1 MGP_129S1SvImJ_G0022895.1 mouse_genomes_project 16 56306382 56318533 - MGP_129S1SvImJ_P0044727 Nit2 protein_coding protein_coding MGP_129S1SvImJ_T0043940.1 MGP_129S1SvImJ_G0022698.1 mouse_genomes_project 16 25075348 25118480 + MGP_129S1SvImJ_P0043940 Ostn protein_coding protein_coding MGP_129S1SvImJ_T0044247.1 MGP_129S1SvImJ_G0022771.1 mouse_genomes_project 16 34107215 34169063 + MGP_129S1SvImJ_P0044247 Hspbap1 protein_coding protein_coding MGP_129S1SvImJ_T0044333.1 MGP_129S1SvImJ_G0022796.1 mouse_genomes_project 16 35357698 35386716 + MGP_129S1SvImJ_P0044333 Hcls1 protein_coding protein_coding MGP_129S1SvImJ_T0044334.1 MGP_129S1SvImJ_G0022796.1 mouse_genomes_project 16 35360002 35385034 + MGP_129S1SvImJ_P0044334 Hcls1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044335.1 MGP_129S1SvImJ_G0022796.1 mouse_genomes_project 16 35377339 35379222 + Hcls1 protein_coding retained_intron MGP_129S1SvImJ_T0098325.1 MGP_129S1SvImJ_G0036410.1 mouse_genomes_project 16 48804072 48806537 + pseudogene pseudogene MGP_129S1SvImJ_T0044536.1 MGP_129S1SvImJ_G0022845.1 mouse_genomes_project 16 43657812 43698661 + MGP_129S1SvImJ_P0044536 Cd200r2 protein_coding protein_coding MGP_129S1SvImJ_T0043019.1 MGP_129S1SvImJ_G0022478.1 mouse_genomes_project 16 1488830 1500574 + MGP_129S1SvImJ_P0043019 4930451G09Rik protein_coding protein_coding MGP_129S1SvImJ_T0044976.1 MGP_129S1SvImJ_G0022983.1 mouse_genomes_project 16 89309428 89310674 - MGP_129S1SvImJ_P0044976 Cldn17 protein_coding protein_coding MGP_129S1SvImJ_T0010126.1 MGP_129S1SvImJ_G0008242.1 mouse_genomes_project 16 8120731 8120809 - Mir1945 miRNA miRNA MGP_129S1SvImJ_T0010129.1 MGP_129S1SvImJ_G0008245.1 mouse_genomes_project 16 10435302 10435403 - Mir6365 miRNA miRNA MGP_129S1SvImJ_T0099524.1 MGP_129S1SvImJ_G0037591.1 mouse_genomes_project 16 47821053 47821157 - Gm22576 snRNA snRNA MGP_129S1SvImJ_T0044910.1 MGP_129S1SvImJ_G0022966.1 mouse_genomes_project 16 81562420 82024770 + MGP_129S1SvImJ_P0044910 Ncam2 protein_coding protein_coding MGP_129S1SvImJ_T0044911.1 MGP_129S1SvImJ_G0022966.1 mouse_genomes_project 16 81562420 82057882 + MGP_129S1SvImJ_P0044911 Ncam2 protein_coding protein_coding MGP_129S1SvImJ_T0044977.1 MGP_129S1SvImJ_G0022984.1 mouse_genomes_project 16 89364729 89367083 - MGP_129S1SvImJ_P0044977 Cldn8 protein_coding protein_coding MGP_129S1SvImJ_T0010165.1 MGP_129S1SvImJ_G0008281.1 mouse_genomes_project 16 55174642 55174746 + Gm24047 miRNA miRNA MGP_129S1SvImJ_T0044763.1 MGP_129S1SvImJ_G0022907.1 mouse_genomes_project 16 57909060 57915403 + MGP_129S1SvImJ_P0044763 Cldnd1 protein_coding protein_coding MGP_129S1SvImJ_T0044764.1 MGP_129S1SvImJ_G0022907.1 mouse_genomes_project 16 57909075 57914760 + MGP_129S1SvImJ_P0044764 Cldnd1 protein_coding protein_coding MGP_129S1SvImJ_T0044765.1 MGP_129S1SvImJ_G0022907.1 mouse_genomes_project 16 57909173 57914141 + MGP_129S1SvImJ_P0044765 Cldnd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044766.1 MGP_129S1SvImJ_G0022907.1 mouse_genomes_project 16 57909189 57914060 + Cldnd1 protein_coding processed_transcript MGP_129S1SvImJ_T0044767.1 MGP_129S1SvImJ_G0022907.1 mouse_genomes_project 16 57909198 57912531 + MGP_129S1SvImJ_P0044767 Cldnd1 protein_coding protein_coding MGP_129S1SvImJ_T0044768.1 MGP_129S1SvImJ_G0022907.1 mouse_genomes_project 16 57913415 57914132 + Cldnd1 protein_coding retained_intron MGP_129S1SvImJ_T0042881.1 MGP_129S1SvImJ_G0022447.1 mouse_genomes_project 16 37734 38676 + MGP_129S1SvImJ_P0042881 Olfr161 protein_coding protein_coding MGP_129S1SvImJ_T0013213.1 MGP_129S1SvImJ_G0011302.1 mouse_genomes_project 16 67246670 67247192 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0043467.1 MGP_129S1SvImJ_G0022586.1 mouse_genomes_project 16 14731432 14735148 - Slc7a4 protein_coding retained_intron MGP_129S1SvImJ_T0043468.1 MGP_129S1SvImJ_G0022586.1 mouse_genomes_project 16 14731753 14735147 - MGP_129S1SvImJ_P0043468 Slc7a4 protein_coding protein_coding MGP_129S1SvImJ_T0043469.1 MGP_129S1SvImJ_G0022586.1 mouse_genomes_project 16 14733879 14735108 - MGP_129S1SvImJ_P0043469 Slc7a4 protein_coding protein_coding MGP_129S1SvImJ_T0043470.1 MGP_129S1SvImJ_G0022586.1 mouse_genomes_project 16 14733989 14734697 - MGP_129S1SvImJ_P0043470 Slc7a4 protein_coding protein_coding MGP_129S1SvImJ_T0043471.1 MGP_129S1SvImJ_G0022586.1 mouse_genomes_project 16 14734165 14735148 - MGP_129S1SvImJ_P0043471 Slc7a4 protein_coding protein_coding MGP_129S1SvImJ_T0044176.1 MGP_129S1SvImJ_G0022752.1 mouse_genomes_project 16 31216704 31295137 + MGP_129S1SvImJ_P0044176 Lmln protein_coding protein_coding MGP_129S1SvImJ_T0044177.1 MGP_129S1SvImJ_G0022752.1 mouse_genomes_project 16 31255611 31271406 + Lmln protein_coding retained_intron MGP_129S1SvImJ_T0044178.1 MGP_129S1SvImJ_G0022752.1 mouse_genomes_project 16 31283173 31291309 + Lmln protein_coding retained_intron MGP_129S1SvImJ_T0044179.1 MGP_129S1SvImJ_G0022752.1 mouse_genomes_project 16 31291662 31293004 + Lmln protein_coding processed_transcript MGP_129S1SvImJ_T0100778.1 MGP_129S1SvImJ_G0038845.1 mouse_genomes_project 16 22535775 22535909 + Gm22672 snoRNA snoRNA MGP_129S1SvImJ_T0000989.1 MGP_129S1SvImJ_G0000919.1 mouse_genomes_project 16 77527815 77529089 + TEC TEC MGP_129S1SvImJ_T0044286.1 MGP_129S1SvImJ_G0022788.1 mouse_genomes_project 16 34846428 34851266 - MGP_129S1SvImJ_P0044286 Stfa3 protein_coding protein_coding MGP_129S1SvImJ_T0043947.1 MGP_129S1SvImJ_G0022701.1 mouse_genomes_project 16 25962267 26250213 - MGP_129S1SvImJ_P0043947 Fgf12 protein_coding protein_coding MGP_129S1SvImJ_T0045011.1 MGP_129S1SvImJ_G0023014.1 mouse_genomes_project 16 90009066 90009463 + MGP_129S1SvImJ_P0045011 Gm9789 protein_coding protein_coding MGP_129S1SvImJ_T0043633.1 MGP_129S1SvImJ_G0022619.1 mouse_genomes_project 16 16073762 16079373 + MGP_129S1SvImJ_P0043633 Ufd1l protein_coding protein_coding MGP_129S1SvImJ_T0043634.1 MGP_129S1SvImJ_G0022619.1 mouse_genomes_project 16 16073807 16098312 + MGP_129S1SvImJ_P0043634 Ufd1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043635.1 MGP_129S1SvImJ_G0022619.1 mouse_genomes_project 16 16073815 16099258 + MGP_129S1SvImJ_P0043635 Ufd1l protein_coding protein_coding MGP_129S1SvImJ_T0043636.1 MGP_129S1SvImJ_G0022619.1 mouse_genomes_project 16 16074277 16079926 + Ufd1l protein_coding processed_transcript MGP_129S1SvImJ_T0043637.1 MGP_129S1SvImJ_G0022619.1 mouse_genomes_project 16 16074277 16099263 + MGP_129S1SvImJ_P0043637 Ufd1l protein_coding protein_coding MGP_129S1SvImJ_T0043638.1 MGP_129S1SvImJ_G0022619.1 mouse_genomes_project 16 16074304 16091699 + MGP_129S1SvImJ_P0043638 Ufd1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043639.1 MGP_129S1SvImJ_G0022619.1 mouse_genomes_project 16 16074339 16089058 + MGP_129S1SvImJ_P0043639 Ufd1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043640.1 MGP_129S1SvImJ_G0022619.1 mouse_genomes_project 16 16087241 16098256 + Ufd1l protein_coding retained_intron MGP_129S1SvImJ_T0043641.1 MGP_129S1SvImJ_G0022619.1 mouse_genomes_project 16 16091062 16092457 + MGP_129S1SvImJ_P0043641 Ufd1l protein_coding protein_coding MGP_129S1SvImJ_T0043642.1 MGP_129S1SvImJ_G0022619.1 mouse_genomes_project 16 16091250 16098406 + Ufd1l protein_coding retained_intron MGP_129S1SvImJ_T0043292.1 MGP_129S1SvImJ_G0022550.1 mouse_genomes_project 16 12624755 12664398 - MGP_129S1SvImJ_P0043292 Ube2v2 protein_coding protein_coding MGP_129S1SvImJ_T0045099.1 MGP_129S1SvImJ_G0023041.1 mouse_genomes_project 16 92495891 92518051 + MGP_129S1SvImJ_P0045099 Ifnar1 protein_coding protein_coding MGP_129S1SvImJ_T0045100.1 MGP_129S1SvImJ_G0023041.1 mouse_genomes_project 16 92495902 92518047 + MGP_129S1SvImJ_P0045100 Ifnar1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045101.1 MGP_129S1SvImJ_G0023041.1 mouse_genomes_project 16 92495917 92518051 + MGP_129S1SvImJ_P0045101 Ifnar1 protein_coding protein_coding MGP_129S1SvImJ_T0045102.1 MGP_129S1SvImJ_G0023041.1 mouse_genomes_project 16 92495930 92502443 + Ifnar1 protein_coding retained_intron MGP_129S1SvImJ_T0045103.1 MGP_129S1SvImJ_G0023041.1 mouse_genomes_project 16 92495989 92506789 + MGP_129S1SvImJ_P0045103 Ifnar1 protein_coding protein_coding MGP_129S1SvImJ_T0043800.1 MGP_129S1SvImJ_G0022655.1 mouse_genomes_project 16 18074996 18080575 - MGP_129S1SvImJ_P0043800 Thpo protein_coding protein_coding MGP_129S1SvImJ_T0045212.1 MGP_129S1SvImJ_G0023063.1 mouse_genomes_project 16 94905343 95010519 + MGP_129S1SvImJ_P0045212 Dopey2 protein_coding protein_coding MGP_129S1SvImJ_T0045213.1 MGP_129S1SvImJ_G0023063.1 mouse_genomes_project 16 94905414 95010522 + MGP_129S1SvImJ_P0045213 Dopey2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0044402.1 MGP_129S1SvImJ_G0022817.1 mouse_genomes_project 16 37029121 37054742 - MGP_129S1SvImJ_P0044402 Timmdc1 protein_coding protein_coding MGP_129S1SvImJ_T0044403.1 MGP_129S1SvImJ_G0022817.1 mouse_genomes_project 16 37048588 37054720 - Timmdc1 protein_coding processed_transcript MGP_129S1SvImJ_T0013156.1 MGP_129S1SvImJ_G0011245.1 mouse_genomes_project 16 13640865 13641285 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011438.1 MGP_129S1SvImJ_G0009554.1 mouse_genomes_project 16 94847408 94847689 + Gm22344 misc_RNA misc_RNA MGP_129S1SvImJ_T0011425.1 MGP_129S1SvImJ_G0009541.1 mouse_genomes_project 16 5104036 5104325 - Gm25782 misc_RNA misc_RNA MGP_129S1SvImJ_T0044900.1 MGP_129S1SvImJ_G0022961.1 mouse_genomes_project 16 78519353 78537358 - MGP_129S1SvImJ_P0044900 protein_coding protein_coding MGP_129S1SvImJ_T0010185.1 MGP_129S1SvImJ_G0008301.1 mouse_genomes_project 16 99332481 99332540 - Mir6964 miRNA miRNA MGP_129S1SvImJ_T0013182.1 MGP_129S1SvImJ_G0011271.1 mouse_genomes_project 16 30837376 30838316 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0044401.1 MGP_129S1SvImJ_G0022816.1 mouse_genomes_project 16 36988892 37017867 + MGP_129S1SvImJ_P0044401 Cd80 protein_coding protein_coding MGP_129S1SvImJ_T0044978.1 MGP_129S1SvImJ_G0022985.1 mouse_genomes_project 16 89420323 89421895 - MGP_129S1SvImJ_P0044978 Krtap24-1 protein_coding protein_coding MGP_129S1SvImJ_T0043216.1 MGP_129S1SvImJ_G0022531.1 mouse_genomes_project 16 10506221 10648407 - MGP_129S1SvImJ_P0043216 Parn protein_coding protein_coding MGP_129S1SvImJ_T0017553.1 MGP_129S1SvImJ_G0015326.1 mouse_genomes_project 16 91991632 91996894 + 4930404I05Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017554.1 MGP_129S1SvImJ_G0015326.1 mouse_genomes_project 16 91994101 91997134 + 4930404I05Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0102014.1 MGP_129S1SvImJ_G0039866.1 mouse_genomes_project 16 17821789 17826626 + unitary_pseudogene unitary_pseudogene MGP_129S1SvImJ_T0011437.1 MGP_129S1SvImJ_G0009553.1 mouse_genomes_project 16 85191363 85191685 - Gm25292 misc_RNA misc_RNA MGP_129S1SvImJ_T0044553.1 MGP_129S1SvImJ_G0022848.1 mouse_genomes_project 16 43915651 43935000 - MGP_129S1SvImJ_P0044553 Slc35a5 protein_coding protein_coding MGP_129S1SvImJ_T0044554.1 MGP_129S1SvImJ_G0022848.1 mouse_genomes_project 16 43918025 43934860 - MGP_129S1SvImJ_P0044554 Slc35a5 protein_coding protein_coding MGP_129S1SvImJ_T0044555.1 MGP_129S1SvImJ_G0022848.1 mouse_genomes_project 16 43920093 43928001 - Slc35a5 protein_coding retained_intron MGP_129S1SvImJ_T0044556.1 MGP_129S1SvImJ_G0022848.1 mouse_genomes_project 16 43920236 43934938 - MGP_129S1SvImJ_P0044556 Slc35a5 protein_coding protein_coding MGP_129S1SvImJ_T0044557.1 MGP_129S1SvImJ_G0022848.1 mouse_genomes_project 16 43920256 43934477 - MGP_129S1SvImJ_P0044557 Slc35a5 protein_coding protein_coding MGP_129S1SvImJ_T0044558.1 MGP_129S1SvImJ_G0022848.1 mouse_genomes_project 16 43928641 43934949 - Slc35a5 protein_coding retained_intron MGP_129S1SvImJ_T0044559.1 MGP_129S1SvImJ_G0022848.1 mouse_genomes_project 16 43928684 43934747 - MGP_129S1SvImJ_P0044559 Slc35a5 protein_coding protein_coding MGP_129S1SvImJ_T0044560.1 MGP_129S1SvImJ_G0022848.1 mouse_genomes_project 16 43930769 43934894 - Slc35a5 protein_coding retained_intron MGP_129S1SvImJ_T0017533.1 MGP_129S1SvImJ_G0015322.1 mouse_genomes_project 16 58840010 58884198 - Crybg3 processed_transcript processed_transcript MGP_129S1SvImJ_T0013167.1 MGP_129S1SvImJ_G0011256.1 mouse_genomes_project 16 17884421 17884704 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099502.1 MGP_129S1SvImJ_G0037569.1 mouse_genomes_project 16 19705288 19705396 + Gm25810 snRNA snRNA MGP_129S1SvImJ_T0010167.1 MGP_129S1SvImJ_G0008283.1 mouse_genomes_project 16 60002668 60002781 - Gm27784 miRNA miRNA MGP_129S1SvImJ_T0044143.1 MGP_129S1SvImJ_G0022748.1 mouse_genomes_project 16 31003125 31018878 + Fyttd1 protein_coding processed_transcript MGP_129S1SvImJ_T0044144.1 MGP_129S1SvImJ_G0022748.1 mouse_genomes_project 16 31003406 31036331 + MGP_129S1SvImJ_P0044144 Fyttd1 protein_coding protein_coding MGP_129S1SvImJ_T0044145.1 MGP_129S1SvImJ_G0022748.1 mouse_genomes_project 16 31003409 31036419 + MGP_129S1SvImJ_P0044145 Fyttd1 protein_coding protein_coding MGP_129S1SvImJ_T0044146.1 MGP_129S1SvImJ_G0022748.1 mouse_genomes_project 16 31003438 31024715 + Fyttd1 protein_coding processed_transcript MGP_129S1SvImJ_T0044147.1 MGP_129S1SvImJ_G0022748.1 mouse_genomes_project 16 31003438 31022721 + Fyttd1 protein_coding retained_intron MGP_129S1SvImJ_T0044148.1 MGP_129S1SvImJ_G0022748.1 mouse_genomes_project 16 31003476 31026316 + Fyttd1 protein_coding retained_intron MGP_129S1SvImJ_T0044149.1 MGP_129S1SvImJ_G0022748.1 mouse_genomes_project 16 31009511 31033086 + MGP_129S1SvImJ_P0044149 Fyttd1 protein_coding protein_coding MGP_129S1SvImJ_T0044150.1 MGP_129S1SvImJ_G0022748.1 mouse_genomes_project 16 31022555 31033235 + Fyttd1 protein_coding processed_transcript MGP_129S1SvImJ_T0044151.1 MGP_129S1SvImJ_G0022748.1 mouse_genomes_project 16 31026214 31033158 + Fyttd1 protein_coding retained_intron MGP_129S1SvImJ_T0044152.1 MGP_129S1SvImJ_G0022748.1 mouse_genomes_project 16 31027688 31033094 + Fyttd1 protein_coding retained_intron MGP_129S1SvImJ_T0044153.1 MGP_129S1SvImJ_G0022748.1 mouse_genomes_project 16 31029563 31033060 + Fyttd1 protein_coding retained_intron MGP_129S1SvImJ_T0043810.1 MGP_129S1SvImJ_G0022659.1 mouse_genomes_project 16 18847749 19012539 + MGP_129S1SvImJ_P0043810 Vps8 protein_coding protein_coding MGP_129S1SvImJ_T0043811.1 MGP_129S1SvImJ_G0022659.1 mouse_genomes_project 16 18847749 19072649 + MGP_129S1SvImJ_P0043811 Vps8 protein_coding protein_coding MGP_129S1SvImJ_T0043812.1 MGP_129S1SvImJ_G0022659.1 mouse_genomes_project 16 18847749 19072649 + MGP_129S1SvImJ_P0043812 Vps8 protein_coding protein_coding MGP_129S1SvImJ_T0043813.1 MGP_129S1SvImJ_G0022659.1 mouse_genomes_project 16 18847800 19072649 + MGP_129S1SvImJ_P0043813 Vps8 protein_coding protein_coding MGP_129S1SvImJ_T0043814.1 MGP_129S1SvImJ_G0022659.1 mouse_genomes_project 16 18847827 18977338 + MGP_129S1SvImJ_P0043814 Vps8 protein_coding protein_coding MGP_129S1SvImJ_T0043815.1 MGP_129S1SvImJ_G0022659.1 mouse_genomes_project 16 18847832 19072641 + MGP_129S1SvImJ_P0043815 Vps8 protein_coding protein_coding MGP_129S1SvImJ_T0043816.1 MGP_129S1SvImJ_G0022659.1 mouse_genomes_project 16 18847903 18859605 + MGP_129S1SvImJ_P0043816 Vps8 protein_coding protein_coding MGP_129S1SvImJ_T0043817.1 MGP_129S1SvImJ_G0022659.1 mouse_genomes_project 16 18894210 19069541 + MGP_129S1SvImJ_P0043817 Vps8 protein_coding protein_coding MGP_129S1SvImJ_T0043818.1 MGP_129S1SvImJ_G0022659.1 mouse_genomes_project 16 18937541 19072644 + MGP_129S1SvImJ_P0043818 Vps8 protein_coding protein_coding MGP_129S1SvImJ_T0043819.1 MGP_129S1SvImJ_G0022659.1 mouse_genomes_project 16 18958412 18964112 + Vps8 protein_coding retained_intron MGP_129S1SvImJ_T0043820.1 MGP_129S1SvImJ_G0022659.1 mouse_genomes_project 16 18958482 18991094 + MGP_129S1SvImJ_P0043820 Vps8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043821.1 MGP_129S1SvImJ_G0022659.1 mouse_genomes_project 16 19001655 19016278 + Vps8 protein_coding retained_intron MGP_129S1SvImJ_T0043822.1 MGP_129S1SvImJ_G0022659.1 mouse_genomes_project 16 19054865 19072385 + Vps8 protein_coding processed_transcript MGP_129S1SvImJ_T0010122.1 MGP_129S1SvImJ_G0008238.1 mouse_genomes_project 16 1750519 1750605 - Mir6364 miRNA miRNA MGP_129S1SvImJ_T0013218.1 MGP_129S1SvImJ_G0011307.1 mouse_genomes_project 16 79141694 79142053 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006833.1 MGP_129S1SvImJ_G0005637.1 mouse_genomes_project 16 7748875 7751677 - Gm21859 lincRNA lincRNA MGP_129S1SvImJ_T0043684.1 MGP_129S1SvImJ_G0022639.1 mouse_genomes_project 16 17591249 17613898 - MGP_129S1SvImJ_P0043684 Parl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043685.1 MGP_129S1SvImJ_G0022639.1 mouse_genomes_project 16 17591249 17613940 - MGP_129S1SvImJ_P0043685 Parl protein_coding protein_coding MGP_129S1SvImJ_T0043686.1 MGP_129S1SvImJ_G0022639.1 mouse_genomes_project 16 17591432 17594674 - Parl protein_coding retained_intron MGP_129S1SvImJ_T0043687.1 MGP_129S1SvImJ_G0022639.1 mouse_genomes_project 16 17594173 17613893 - Parl protein_coding retained_intron MGP_129S1SvImJ_T0043688.1 MGP_129S1SvImJ_G0022639.1 mouse_genomes_project 16 17596957 17599670 - Parl protein_coding retained_intron MGP_129S1SvImJ_T0043689.1 MGP_129S1SvImJ_G0022639.1 mouse_genomes_project 16 17598359 17612882 - Parl protein_coding processed_transcript MGP_129S1SvImJ_T0043690.1 MGP_129S1SvImJ_G0022639.1 mouse_genomes_project 16 17598385 17613907 - MGP_129S1SvImJ_P0043690 Parl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043691.1 MGP_129S1SvImJ_G0022639.1 mouse_genomes_project 16 17604472 17609718 - Parl protein_coding retained_intron MGP_129S1SvImJ_T0043692.1 MGP_129S1SvImJ_G0022639.1 mouse_genomes_project 16 17609149 17613366 - Parl protein_coding processed_transcript MGP_129S1SvImJ_T0043693.1 MGP_129S1SvImJ_G0022639.1 mouse_genomes_project 16 17609676 17613914 - Parl protein_coding retained_intron MGP_129S1SvImJ_T0010161.1 MGP_129S1SvImJ_G0008277.1 mouse_genomes_project 16 43313783 43313867 - Mir3081 miRNA miRNA MGP_129S1SvImJ_T0099493.1 MGP_129S1SvImJ_G0037560.1 mouse_genomes_project 16 7836238 7836422 + Gm24961 snRNA snRNA MGP_129S1SvImJ_T0003709.1 MGP_129S1SvImJ_G0003353.1 mouse_genomes_project 16 48638723 48678338 - Gm15518 antisense antisense MGP_129S1SvImJ_T0045043.1 MGP_129S1SvImJ_G0023028.1 mouse_genomes_project 16 91702382 91712747 + Mrap protein_coding processed_transcript MGP_129S1SvImJ_T0045044.1 MGP_129S1SvImJ_G0023028.1 mouse_genomes_project 16 91702382 91716065 + Mrap protein_coding processed_transcript MGP_129S1SvImJ_T0045045.1 MGP_129S1SvImJ_G0023028.1 mouse_genomes_project 16 91702382 91715576 + Mrap protein_coding processed_transcript MGP_129S1SvImJ_T0045046.1 MGP_129S1SvImJ_G0023028.1 mouse_genomes_project 16 91702382 91716065 + MGP_129S1SvImJ_P0045046 Mrap protein_coding protein_coding MGP_129S1SvImJ_T0045088.1 MGP_129S1SvImJ_G0023038.1 mouse_genomes_project 16 92375430 92410061 + MGP_129S1SvImJ_P0045088 Ifnar2 protein_coding protein_coding MGP_129S1SvImJ_T0045089.1 MGP_129S1SvImJ_G0023038.1 mouse_genomes_project 16 92375454 92396439 + MGP_129S1SvImJ_P0045089 Ifnar2 protein_coding protein_coding MGP_129S1SvImJ_T0045090.1 MGP_129S1SvImJ_G0023038.1 mouse_genomes_project 16 92375463 92396616 + MGP_129S1SvImJ_P0045090 Ifnar2 protein_coding protein_coding MGP_129S1SvImJ_T0045091.1 MGP_129S1SvImJ_G0023038.1 mouse_genomes_project 16 92390362 92394352 + MGP_129S1SvImJ_P0045091 Ifnar2 protein_coding protein_coding MGP_129S1SvImJ_T0044165.1 MGP_129S1SvImJ_G0022750.1 mouse_genomes_project 16 31152410 31210216 - MGP_129S1SvImJ_P0044165 Iqcg protein_coding protein_coding MGP_129S1SvImJ_T0044166.1 MGP_129S1SvImJ_G0022750.1 mouse_genomes_project 16 31153975 31164955 - Iqcg protein_coding processed_transcript MGP_129S1SvImJ_T0044167.1 MGP_129S1SvImJ_G0022750.1 mouse_genomes_project 16 31188807 31210244 - MGP_129S1SvImJ_P0044167 Iqcg protein_coding protein_coding MGP_129S1SvImJ_T0044168.1 MGP_129S1SvImJ_G0022750.1 mouse_genomes_project 16 31200627 31210211 - Iqcg protein_coding retained_intron MGP_129S1SvImJ_T0043217.1 MGP_129S1SvImJ_G0022532.1 mouse_genomes_project 16 10652094 10683301 + MGP_129S1SvImJ_P0043217 Bfar protein_coding protein_coding MGP_129S1SvImJ_T0043219.1 MGP_129S1SvImJ_G0022532.1 mouse_genomes_project 16 10652186 10678978 + MGP_129S1SvImJ_P0043219 Bfar protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043220.1 MGP_129S1SvImJ_G0022532.1 mouse_genomes_project 16 10652256 10683291 + MGP_129S1SvImJ_P0043220 Bfar protein_coding protein_coding MGP_129S1SvImJ_T0043221.1 MGP_129S1SvImJ_G0022532.1 mouse_genomes_project 16 10652298 10665879 + Bfar protein_coding retained_intron MGP_129S1SvImJ_T0043222.1 MGP_129S1SvImJ_G0022532.1 mouse_genomes_project 16 10665127 10667804 + Bfar protein_coding retained_intron MGP_129S1SvImJ_T0043223.1 MGP_129S1SvImJ_G0022532.1 mouse_genomes_project 16 10665493 10668235 + Bfar protein_coding retained_intron MGP_129S1SvImJ_T0043224.1 MGP_129S1SvImJ_G0022532.1 mouse_genomes_project 16 10672227 10677195 + Bfar protein_coding retained_intron MGP_129S1SvImJ_T0011427.1 MGP_129S1SvImJ_G0009543.1 mouse_genomes_project 16 20107443 20107635 + Gm22481 misc_RNA misc_RNA MGP_129S1SvImJ_T0100767.1 MGP_129S1SvImJ_G0038834.1 mouse_genomes_project 16 5133759 5133841 - Gm23706 snoRNA snoRNA MGP_129S1SvImJ_T0045278.1 MGP_129S1SvImJ_G0023073.1 mouse_genomes_project 16 95816065 95947365 + MGP_129S1SvImJ_P0045278 Dyrk1a protein_coding protein_coding MGP_129S1SvImJ_T0045279.1 MGP_129S1SvImJ_G0023073.1 mouse_genomes_project 16 95818497 95944503 + MGP_129S1SvImJ_P0045279 Dyrk1a protein_coding protein_coding MGP_129S1SvImJ_T0045280.1 MGP_129S1SvImJ_G0023073.1 mouse_genomes_project 16 95818882 95915466 + MGP_129S1SvImJ_P0045280 Dyrk1a protein_coding protein_coding MGP_129S1SvImJ_T0045281.1 MGP_129S1SvImJ_G0023073.1 mouse_genomes_project 16 95818925 95947815 + MGP_129S1SvImJ_P0045281 Dyrk1a protein_coding protein_coding MGP_129S1SvImJ_T0045282.1 MGP_129S1SvImJ_G0023073.1 mouse_genomes_project 16 95818925 95918374 + MGP_129S1SvImJ_P0045282 Dyrk1a protein_coding protein_coding MGP_129S1SvImJ_T0045283.1 MGP_129S1SvImJ_G0023073.1 mouse_genomes_project 16 95918438 95929322 + Dyrk1a protein_coding retained_intron MGP_129S1SvImJ_T0044269.1 MGP_129S1SvImJ_G0022776.1 mouse_genomes_project 16 34408788 34410572 + MGP_129S1SvImJ_P0044269 Wdr5b protein_coding protein_coding MGP_129S1SvImJ_T0043299.1 MGP_129S1SvImJ_G0022554.1 mouse_genomes_project 16 12984678 13248755 - MGP_129S1SvImJ_P0043299 Spidr protein_coding protein_coding MGP_129S1SvImJ_T0045336.1 MGP_129S1SvImJ_G0023081.1 mouse_genomes_project 16 97511152 97520530 + Wrb protein_coding retained_intron MGP_129S1SvImJ_T0045337.1 MGP_129S1SvImJ_G0023081.1 mouse_genomes_project 16 97511152 97512510 + Wrb protein_coding processed_transcript MGP_129S1SvImJ_T0045338.1 MGP_129S1SvImJ_G0023081.1 mouse_genomes_project 16 97511152 97523623 + MGP_129S1SvImJ_P0045338 Wrb protein_coding protein_coding MGP_129S1SvImJ_T0045339.1 MGP_129S1SvImJ_G0023081.1 mouse_genomes_project 16 97511156 97517595 + MGP_129S1SvImJ_P0045339 Wrb protein_coding protein_coding MGP_129S1SvImJ_T0044475.1 MGP_129S1SvImJ_G0022831.1 mouse_genomes_project 16 42605651 42654408 + MGP_129S1SvImJ_P0044475 Ccdc191 protein_coding protein_coding MGP_129S1SvImJ_T0044476.1 MGP_129S1SvImJ_G0022831.1 mouse_genomes_project 16 42605654 42682135 + MGP_129S1SvImJ_P0044476 Ccdc191 protein_coding protein_coding MGP_129S1SvImJ_T0044477.1 MGP_129S1SvImJ_G0022831.1 mouse_genomes_project 16 42605692 42624127 + MGP_129S1SvImJ_P0044477 Ccdc191 protein_coding protein_coding MGP_129S1SvImJ_T0044478.1 MGP_129S1SvImJ_G0022831.1 mouse_genomes_project 16 42605743 42681525 + MGP_129S1SvImJ_P0044478 Ccdc191 protein_coding protein_coding MGP_129S1SvImJ_T0044479.1 MGP_129S1SvImJ_G0022831.1 mouse_genomes_project 16 42653843 42658395 + Ccdc191 protein_coding processed_transcript MGP_129S1SvImJ_T0044480.1 MGP_129S1SvImJ_G0022831.1 mouse_genomes_project 16 42653964 42682135 + MGP_129S1SvImJ_P0044480 Ccdc191 protein_coding protein_coding MGP_129S1SvImJ_T0043824.1 MGP_129S1SvImJ_G0022661.1 mouse_genomes_project 16 19195840 19224859 - MGP_129S1SvImJ_P0043824 Ehhadh protein_coding protein_coding MGP_129S1SvImJ_T0044523.1 MGP_129S1SvImJ_G0022841.1 mouse_genomes_project 16 43490696 43503678 + MGP_129S1SvImJ_P0044523 Nepro protein_coding protein_coding MGP_129S1SvImJ_T0044524.1 MGP_129S1SvImJ_G0022841.1 mouse_genomes_project 16 43490752 43497758 + MGP_129S1SvImJ_P0044524 Nepro protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044525.1 MGP_129S1SvImJ_G0022841.1 mouse_genomes_project 16 43490752 43502967 + MGP_129S1SvImJ_P0044525 Nepro protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044526.1 MGP_129S1SvImJ_G0022841.1 mouse_genomes_project 16 43492562 43500523 + Nepro protein_coding retained_intron MGP_129S1SvImJ_T0044527.1 MGP_129S1SvImJ_G0022841.1 mouse_genomes_project 16 43493514 43501120 + MGP_129S1SvImJ_P0044527 Nepro protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043394.1 MGP_129S1SvImJ_G0022572.1 mouse_genomes_project 16 14269436 14276097 + MGP_129S1SvImJ_P0043394 Ydjc protein_coding protein_coding MGP_129S1SvImJ_T0043395.1 MGP_129S1SvImJ_G0022572.1 mouse_genomes_project 16 14270658 14273662 + Ydjc protein_coding retained_intron MGP_129S1SvImJ_T0043396.1 MGP_129S1SvImJ_G0022572.1 mouse_genomes_project 16 14271752 14285526 + MGP_129S1SvImJ_P0043396 Ydjc protein_coding protein_coding MGP_129S1SvImJ_T0043397.1 MGP_129S1SvImJ_G0022572.1 mouse_genomes_project 16 14271764 14276513 + Ydjc protein_coding retained_intron MGP_129S1SvImJ_T0043398.1 MGP_129S1SvImJ_G0022572.1 mouse_genomes_project 16 14271791 14273662 + Ydjc protein_coding retained_intron MGP_129S1SvImJ_T0043399.1 MGP_129S1SvImJ_G0022572.1 mouse_genomes_project 16 14271794 14273662 + MGP_129S1SvImJ_P0043399 Ydjc protein_coding protein_coding MGP_129S1SvImJ_T0043408.1 MGP_129S1SvImJ_G0022576.1 mouse_genomes_project 16 14415018 14417368 + MGP_129S1SvImJ_P0043408 Tmem191c protein_coding protein_coding MGP_129S1SvImJ_T0043409.1 MGP_129S1SvImJ_G0022576.1 mouse_genomes_project 16 14415023 14416883 + MGP_129S1SvImJ_P0043409 Tmem191c protein_coding protein_coding MGP_129S1SvImJ_T0043410.1 MGP_129S1SvImJ_G0022576.1 mouse_genomes_project 16 14415037 14416187 + Tmem191c protein_coding processed_transcript MGP_129S1SvImJ_T0043411.1 MGP_129S1SvImJ_G0022576.1 mouse_genomes_project 16 14415051 14415806 + Tmem191c protein_coding retained_intron MGP_129S1SvImJ_T0043412.1 MGP_129S1SvImJ_G0022576.1 mouse_genomes_project 16 14415051 14417364 + MGP_129S1SvImJ_P0043412 Tmem191c protein_coding protein_coding MGP_129S1SvImJ_T0043413.1 MGP_129S1SvImJ_G0022576.1 mouse_genomes_project 16 14415057 14416109 + Tmem191c protein_coding processed_transcript MGP_129S1SvImJ_T0043414.1 MGP_129S1SvImJ_G0022576.1 mouse_genomes_project 16 14415143 14416444 + MGP_129S1SvImJ_P0043414 Tmem191c protein_coding protein_coding MGP_129S1SvImJ_T0043415.1 MGP_129S1SvImJ_G0022576.1 mouse_genomes_project 16 14415386 14417368 + MGP_129S1SvImJ_P0043415 Tmem191c protein_coding protein_coding MGP_129S1SvImJ_T0043416.1 MGP_129S1SvImJ_G0022576.1 mouse_genomes_project 16 14415569 14416912 + MGP_129S1SvImJ_P0043416 Tmem191c protein_coding protein_coding MGP_129S1SvImJ_T0043417.1 MGP_129S1SvImJ_G0022576.1 mouse_genomes_project 16 14415790 14416760 + Tmem191c protein_coding retained_intron MGP_129S1SvImJ_T0043418.1 MGP_129S1SvImJ_G0022576.1 mouse_genomes_project 16 14415804 14416873 + Tmem191c protein_coding retained_intron MGP_129S1SvImJ_T0043419.1 MGP_129S1SvImJ_G0022576.1 mouse_genomes_project 16 14416307 14421936 + Tmem191c protein_coding retained_intron MGP_129S1SvImJ_T0098519.1 MGP_129S1SvImJ_G0036604.1 mouse_genomes_project 16 31137941 31138060 + n-R5s33 rRNA rRNA MGP_129S1SvImJ_T0044714.1 MGP_129S1SvImJ_G0022890.1 mouse_genomes_project 16 55823862 55852134 - MGP_129S1SvImJ_P0044714 Tfg protein_coding protein_coding MGP_129S1SvImJ_T0044715.1 MGP_129S1SvImJ_G0022890.1 mouse_genomes_project 16 55824407 55839228 - MGP_129S1SvImJ_P0044715 Tfg protein_coding protein_coding MGP_129S1SvImJ_T0044716.1 MGP_129S1SvImJ_G0022890.1 mouse_genomes_project 16 55824498 55837997 - MGP_129S1SvImJ_P0044716 Tfg protein_coding protein_coding MGP_129S1SvImJ_T0044717.1 MGP_129S1SvImJ_G0022890.1 mouse_genomes_project 16 55837029 55851995 - MGP_129S1SvImJ_P0044717 Tfg protein_coding protein_coding MGP_129S1SvImJ_T0044718.1 MGP_129S1SvImJ_G0022890.1 mouse_genomes_project 16 55837982 55847696 - MGP_129S1SvImJ_P0044718 Tfg protein_coding protein_coding MGP_129S1SvImJ_T0044719.1 MGP_129S1SvImJ_G0022890.1 mouse_genomes_project 16 55838064 55852044 - MGP_129S1SvImJ_P0044719 Tfg protein_coding protein_coding MGP_129S1SvImJ_T0044720.1 MGP_129S1SvImJ_G0022890.1 mouse_genomes_project 16 55839144 55851866 - MGP_129S1SvImJ_P0044720 Tfg protein_coding protein_coding MGP_129S1SvImJ_T0098518.1 MGP_129S1SvImJ_G0036603.1 mouse_genomes_project 16 28016856 28016959 - n-R5s32 rRNA rRNA MGP_129S1SvImJ_T0043149.1 MGP_129S1SvImJ_G0022518.1 mouse_genomes_project 16 7798766 7834973 - MGP_129S1SvImJ_P0043149 Litaf protein_coding protein_coding MGP_129S1SvImJ_T0043150.1 MGP_129S1SvImJ_G0022518.1 mouse_genomes_project 16 7800315 7815950 - MGP_129S1SvImJ_P0043150 Litaf protein_coding protein_coding MGP_129S1SvImJ_T0043151.1 MGP_129S1SvImJ_G0022518.1 mouse_genomes_project 16 7802834 7914468 - MGP_129S1SvImJ_P0043151 Litaf protein_coding protein_coding MGP_129S1SvImJ_T0043152.1 MGP_129S1SvImJ_G0022518.1 mouse_genomes_project 16 7805828 7834923 - Litaf protein_coding retained_intron MGP_129S1SvImJ_T0011436.1 MGP_129S1SvImJ_G0009552.1 mouse_genomes_project 16 81630378 81630691 - Gm26023 misc_RNA misc_RNA MGP_129S1SvImJ_T0045214.1 MGP_129S1SvImJ_G0023064.1 mouse_genomes_project 16 95039948 95087267 + MGP_129S1SvImJ_P0045214 Morc3 protein_coding protein_coding MGP_129S1SvImJ_T0045215.1 MGP_129S1SvImJ_G0023064.1 mouse_genomes_project 16 95039948 95087264 + MGP_129S1SvImJ_P0045215 Morc3 protein_coding protein_coding MGP_129S1SvImJ_T0045216.1 MGP_129S1SvImJ_G0023064.1 mouse_genomes_project 16 95040062 95053806 + Morc3 protein_coding retained_intron MGP_129S1SvImJ_T0045217.1 MGP_129S1SvImJ_G0023064.1 mouse_genomes_project 16 95040084 95086222 + MGP_129S1SvImJ_P0045217 Morc3 protein_coding protein_coding MGP_129S1SvImJ_T0045218.1 MGP_129S1SvImJ_G0023064.1 mouse_genomes_project 16 95040090 95070485 + MGP_129S1SvImJ_P0045218 Morc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045219.1 MGP_129S1SvImJ_G0023064.1 mouse_genomes_project 16 95053688 95058289 + Morc3 protein_coding processed_transcript MGP_129S1SvImJ_T0045220.1 MGP_129S1SvImJ_G0023064.1 mouse_genomes_project 16 95062845 95064995 + Morc3 protein_coding retained_intron MGP_129S1SvImJ_T0042898.1 MGP_129S1SvImJ_G0022454.1 mouse_genomes_project 16 327605 362118 + MGP_129S1SvImJ_P0042898 Gm20695 protein_coding protein_coding MGP_129S1SvImJ_T0042908.1 MGP_129S1SvImJ_G0022454.1 mouse_genomes_project 16 340850 362087 + Gm20695 protein_coding processed_transcript MGP_129S1SvImJ_T0017527.1 MGP_129S1SvImJ_G0015319.1 mouse_genomes_project 16 41424133 41558273 - 4932412D23Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017528.1 MGP_129S1SvImJ_G0015319.1 mouse_genomes_project 16 41500750 41558448 - 4932412D23Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017529.1 MGP_129S1SvImJ_G0015319.1 mouse_genomes_project 16 41501111 41558426 - 4932412D23Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017530.1 MGP_129S1SvImJ_G0015319.1 mouse_genomes_project 16 41501263 41558432 - 4932412D23Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0010145.1 MGP_129S1SvImJ_G0008261.1 mouse_genomes_project 16 20117740 20117847 + Mir6362 miRNA miRNA MGP_129S1SvImJ_T0017557.1 MGP_129S1SvImJ_G0015329.1 mouse_genomes_project 16 92639509 92651903 + Gm15964 processed_transcript processed_transcript MGP_129S1SvImJ_T0102273.1 MGP_129S1SvImJ_G0040107.1 mouse_genomes_project 16 58162907 58163478 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0000017.1 MGP_129S1SvImJ_G0000012.1 mouse_genomes_project 16 16337529 16337981 - MGP_129S1SvImJ_P0000017 Iglc3 IG_C_gene IG_C_gene MGP_129S1SvImJ_T0044154.1 MGP_129S1SvImJ_G0022749.1 mouse_genomes_project 16 31041554 31152673 + MGP_129S1SvImJ_P0044154 Lrch3 protein_coding protein_coding MGP_129S1SvImJ_T0044155.1 MGP_129S1SvImJ_G0022749.1 mouse_genomes_project 16 31041576 31150169 + MGP_129S1SvImJ_P0044155 Lrch3 protein_coding protein_coding MGP_129S1SvImJ_T0044156.1 MGP_129S1SvImJ_G0022749.1 mouse_genomes_project 16 31041576 31150169 + MGP_129S1SvImJ_P0044156 Lrch3 protein_coding protein_coding MGP_129S1SvImJ_T0044157.1 MGP_129S1SvImJ_G0022749.1 mouse_genomes_project 16 31041577 31125094 + Lrch3 protein_coding retained_intron MGP_129S1SvImJ_T0044158.1 MGP_129S1SvImJ_G0022749.1 mouse_genomes_project 16 31041581 31109237 + MGP_129S1SvImJ_P0044158 Lrch3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044159.1 MGP_129S1SvImJ_G0022749.1 mouse_genomes_project 16 31041596 31149516 + MGP_129S1SvImJ_P0044159 Lrch3 protein_coding protein_coding MGP_129S1SvImJ_T0044160.1 MGP_129S1SvImJ_G0022749.1 mouse_genomes_project 16 31041596 31149725 + MGP_129S1SvImJ_P0044160 Lrch3 protein_coding protein_coding MGP_129S1SvImJ_T0044161.1 MGP_129S1SvImJ_G0022749.1 mouse_genomes_project 16 31083775 31097936 + Lrch3 protein_coding processed_transcript MGP_129S1SvImJ_T0044162.1 MGP_129S1SvImJ_G0022749.1 mouse_genomes_project 16 31115108 31134609 + MGP_129S1SvImJ_P0044162 Lrch3 protein_coding protein_coding MGP_129S1SvImJ_T0044163.1 MGP_129S1SvImJ_G0022749.1 mouse_genomes_project 16 31115136 31134551 + MGP_129S1SvImJ_P0044163 Lrch3 protein_coding protein_coding MGP_129S1SvImJ_T0044164.1 MGP_129S1SvImJ_G0022749.1 mouse_genomes_project 16 31122050 31134662 + MGP_129S1SvImJ_P0044164 Lrch3 protein_coding protein_coding MGP_129S1SvImJ_T0044987.1 MGP_129S1SvImJ_G0022994.1 mouse_genomes_project 16 89600946 89602943 + MGP_129S1SvImJ_P0044987 Gm5965 protein_coding protein_coding MGP_129S1SvImJ_T0013181.1 MGP_129S1SvImJ_G0011270.1 mouse_genomes_project 16 30683717 30684326 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0042884.1 MGP_129S1SvImJ_G0022449.1 mouse_genomes_project 16 187999 194754 + Zfp263 protein_coding retained_intron MGP_129S1SvImJ_T0042885.1 MGP_129S1SvImJ_G0022449.1 mouse_genomes_project 16 188006 193858 + Zfp263 protein_coding processed_transcript MGP_129S1SvImJ_T0042886.1 MGP_129S1SvImJ_G0022449.1 mouse_genomes_project 16 188056 194754 + MGP_129S1SvImJ_P0042886 Zfp263 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0042887.1 MGP_129S1SvImJ_G0022449.1 mouse_genomes_project 16 188184 193245 + Zfp263 protein_coding processed_transcript MGP_129S1SvImJ_T0042888.1 MGP_129S1SvImJ_G0022449.1 mouse_genomes_project 16 188199 194756 + MGP_129S1SvImJ_P0042888 Zfp263 protein_coding protein_coding MGP_129S1SvImJ_T0042889.1 MGP_129S1SvImJ_G0022449.1 mouse_genomes_project 16 188421 193070 + Zfp263 protein_coding processed_transcript MGP_129S1SvImJ_T0043275.1 MGP_129S1SvImJ_G0022545.1 mouse_genomes_project 16 11408836 11531791 + MGP_129S1SvImJ_P0043275 Abcc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043276.1 MGP_129S1SvImJ_G0022545.1 mouse_genomes_project 16 11408836 11531791 + MGP_129S1SvImJ_P0043276 Abcc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043277.1 MGP_129S1SvImJ_G0022545.1 mouse_genomes_project 16 11408836 11531791 + MGP_129S1SvImJ_P0043277 Abcc1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043278.1 MGP_129S1SvImJ_G0022545.1 mouse_genomes_project 16 11408838 11533626 + MGP_129S1SvImJ_P0043278 Abcc1 protein_coding protein_coding MGP_129S1SvImJ_T0043279.1 MGP_129S1SvImJ_G0022545.1 mouse_genomes_project 16 11408854 11451228 + MGP_129S1SvImJ_P0043279 Abcc1 protein_coding protein_coding MGP_129S1SvImJ_T0043280.1 MGP_129S1SvImJ_G0022545.1 mouse_genomes_project 16 11408859 11459870 + MGP_129S1SvImJ_P0043280 Abcc1 protein_coding protein_coding MGP_129S1SvImJ_T0043281.1 MGP_129S1SvImJ_G0022545.1 mouse_genomes_project 16 11412994 11446266 + MGP_129S1SvImJ_P0043281 Abcc1 protein_coding protein_coding MGP_129S1SvImJ_T0043282.1 MGP_129S1SvImJ_G0022545.1 mouse_genomes_project 16 11448775 11449150 + Abcc1 protein_coding processed_transcript MGP_129S1SvImJ_T0043283.1 MGP_129S1SvImJ_G0022545.1 mouse_genomes_project 16 11457170 11477201 + Abcc1 protein_coding retained_intron MGP_129S1SvImJ_T0043284.1 MGP_129S1SvImJ_G0022545.1 mouse_genomes_project 16 11517110 11526125 + Abcc1 protein_coding retained_intron MGP_129S1SvImJ_T0043285.1 MGP_129S1SvImJ_G0022545.1 mouse_genomes_project 16 11517115 11531931 + Abcc1 protein_coding retained_intron MGP_129S1SvImJ_T0013139.1 MGP_129S1SvImJ_G0011228.1 mouse_genomes_project 16 5287544 5288070 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099514.1 MGP_129S1SvImJ_G0037581.1 mouse_genomes_project 16 34756847 34756952 + Gm23306 snRNA snRNA MGP_129S1SvImJ_T0045150.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92763597 92917389 + MGP_129S1SvImJ_P0045150 Itsn1 protein_coding protein_coding MGP_129S1SvImJ_T0045151.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92763597 92965586 + MGP_129S1SvImJ_P0045151 Itsn1 protein_coding protein_coding MGP_129S1SvImJ_T0045152.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92763597 92972123 + MGP_129S1SvImJ_P0045152 Itsn1 protein_coding protein_coding MGP_129S1SvImJ_T0045153.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92763614 92874292 + MGP_129S1SvImJ_P0045153 Itsn1 protein_coding protein_coding MGP_129S1SvImJ_T0045154.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92763710 92820396 + Itsn1 protein_coding retained_intron MGP_129S1SvImJ_T0045155.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92763815 92832277 + Itsn1 protein_coding retained_intron MGP_129S1SvImJ_T0045156.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92763836 92916235 + MGP_129S1SvImJ_P0045156 Itsn1 protein_coding protein_coding MGP_129S1SvImJ_T0045157.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92820178 92860675 + MGP_129S1SvImJ_P0045157 Itsn1 protein_coding protein_coding MGP_129S1SvImJ_T0045158.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92820210 92915965 + MGP_129S1SvImJ_P0045158 Itsn1 protein_coding protein_coding MGP_129S1SvImJ_T0045159.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92822136 92870256 + Itsn1 protein_coding processed_transcript MGP_129S1SvImJ_T0045160.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92846793 92858972 + Itsn1 protein_coding processed_transcript MGP_129S1SvImJ_T0045161.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92846807 92854363 + Itsn1 protein_coding retained_intron MGP_129S1SvImJ_T0045162.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92858880 92869843 + Itsn1 protein_coding processed_transcript MGP_129S1SvImJ_T0045163.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92869482 92870219 + Itsn1 protein_coding retained_intron MGP_129S1SvImJ_T0045164.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92883565 92895179 + Itsn1 protein_coding retained_intron MGP_129S1SvImJ_T0045165.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92883654 92897123 + MGP_129S1SvImJ_P0045165 Itsn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045166.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92886490 92897123 + MGP_129S1SvImJ_P0045166 Itsn1 protein_coding protein_coding MGP_129S1SvImJ_T0045167.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92897673 92907179 + MGP_129S1SvImJ_P0045167 Itsn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045168.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92905888 92917085 + Itsn1 protein_coding retained_intron MGP_129S1SvImJ_T0045169.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92923316 92944427 + Itsn1 protein_coding processed_transcript MGP_129S1SvImJ_T0045170.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92936325 92959749 + MGP_129S1SvImJ_P0045170 Itsn1 protein_coding protein_coding MGP_129S1SvImJ_T0045171.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92949986 92959772 + MGP_129S1SvImJ_P0045171 Itsn1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045172.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92949988 92959749 + MGP_129S1SvImJ_P0045172 Itsn1 protein_coding protein_coding MGP_129S1SvImJ_T0045173.1 MGP_129S1SvImJ_G0023050.1 mouse_genomes_project 16 92963556 92966758 + Itsn1 protein_coding processed_transcript MGP_129S1SvImJ_T0013137.1 MGP_129S1SvImJ_G0011226.1 mouse_genomes_project 16 5287529 5288070 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0043730.1 MGP_129S1SvImJ_G0022646.1 mouse_genomes_project 16 17924572 17934235 + MGP_129S1SvImJ_P0043730 Vwa5b2 protein_coding protein_coding MGP_129S1SvImJ_T0043731.1 MGP_129S1SvImJ_G0022646.1 mouse_genomes_project 16 17924683 17925838 + Vwa5b2 protein_coding processed_transcript MGP_129S1SvImJ_T0043732.1 MGP_129S1SvImJ_G0022646.1 mouse_genomes_project 16 17924683 17942800 + MGP_129S1SvImJ_P0043732 Vwa5b2 protein_coding protein_coding MGP_129S1SvImJ_T0043733.1 MGP_129S1SvImJ_G0022646.1 mouse_genomes_project 16 17924685 17926963 + Vwa5b2 protein_coding processed_transcript MGP_129S1SvImJ_T0043734.1 MGP_129S1SvImJ_G0022646.1 mouse_genomes_project 16 17924952 17926997 + Vwa5b2 protein_coding retained_intron MGP_129S1SvImJ_T0043735.1 MGP_129S1SvImJ_G0022646.1 mouse_genomes_project 16 17925127 17942806 + MGP_129S1SvImJ_P0043735 Vwa5b2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0043736.1 MGP_129S1SvImJ_G0022646.1 mouse_genomes_project 16 17925160 17925633 + Vwa5b2 protein_coding retained_intron MGP_129S1SvImJ_T0043737.1 MGP_129S1SvImJ_G0022646.1 mouse_genomes_project 16 17925191 17928166 + Vwa5b2 protein_coding retained_intron MGP_129S1SvImJ_T0043738.1 MGP_129S1SvImJ_G0022646.1 mouse_genomes_project 16 17925247 17934230 + MGP_129S1SvImJ_P0043738 Vwa5b2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043739.1 MGP_129S1SvImJ_G0022646.1 mouse_genomes_project 16 17926932 17942797 + MGP_129S1SvImJ_P0043739 Vwa5b2 protein_coding protein_coding MGP_129S1SvImJ_T0043740.1 MGP_129S1SvImJ_G0022646.1 mouse_genomes_project 16 17938542 17942800 + Vwa5b2 protein_coding retained_intron MGP_129S1SvImJ_T0011826.1 MGP_129S1SvImJ_G0009936.1 mouse_genomes_project 16 58280307 58358037 - MGP_129S1SvImJ_P0011826 polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0098327.1 MGP_129S1SvImJ_G0036412.1 mouse_genomes_project 16 58426199 58427129 - pseudogene pseudogene MGP_129S1SvImJ_T0013136.1 MGP_129S1SvImJ_G0011225.1 mouse_genomes_project 16 1023771 1024159 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001000.1 MGP_129S1SvImJ_G0000930.1 mouse_genomes_project 16 79877767 79878367 + TEC TEC MGP_129S1SvImJ_T0044563.1 MGP_129S1SvImJ_G0022850.1 mouse_genomes_project 16 44001704 44032835 + MGP_129S1SvImJ_P0044563 Btla protein_coding protein_coding MGP_129S1SvImJ_T0044564.1 MGP_129S1SvImJ_G0022850.1 mouse_genomes_project 16 44001726 44032838 + MGP_129S1SvImJ_P0044564 Btla protein_coding protein_coding MGP_129S1SvImJ_T0044775.1 MGP_129S1SvImJ_G0022912.1 mouse_genomes_project 16 58109741 58110701 - MGP_129S1SvImJ_P0044775 Olfr178 protein_coding protein_coding MGP_129S1SvImJ_T0044776.1 MGP_129S1SvImJ_G0022912.1 mouse_genomes_project 16 58109741 58112561 - MGP_129S1SvImJ_P0044776 Olfr178 protein_coding protein_coding MGP_129S1SvImJ_T0099523.1 MGP_129S1SvImJ_G0037590.1 mouse_genomes_project 16 46365655 46365762 - Gm24651 snRNA snRNA MGP_129S1SvImJ_T0043312.1 MGP_129S1SvImJ_G0022558.1 mouse_genomes_project 16 13522810 13659651 - MGP_129S1SvImJ_P0043312 Fgd4 protein_coding protein_coding MGP_129S1SvImJ_T0043313.1 MGP_129S1SvImJ_G0022558.1 mouse_genomes_project 16 13528457 13698852 - MGP_129S1SvImJ_P0043313 Fgd4 protein_coding protein_coding MGP_129S1SvImJ_T0043314.1 MGP_129S1SvImJ_G0022558.1 mouse_genomes_project 16 13528496 13625012 - MGP_129S1SvImJ_P0043314 Fgd4 protein_coding protein_coding MGP_129S1SvImJ_T0043315.1 MGP_129S1SvImJ_G0022558.1 mouse_genomes_project 16 13539131 13659478 - Fgd4 protein_coding retained_intron MGP_129S1SvImJ_T0043316.1 MGP_129S1SvImJ_G0022558.1 mouse_genomes_project 16 13539131 13608897 - MGP_129S1SvImJ_P0043316 Fgd4 protein_coding protein_coding MGP_129S1SvImJ_T0043317.1 MGP_129S1SvImJ_G0022558.1 mouse_genomes_project 16 13559254 13659643 - Fgd4 protein_coding retained_intron MGP_129S1SvImJ_T0043318.1 MGP_129S1SvImJ_G0022558.1 mouse_genomes_project 16 13560015 13659643 - Fgd4 protein_coding retained_intron MGP_129S1SvImJ_T0043319.1 MGP_129S1SvImJ_G0022558.1 mouse_genomes_project 16 13568904 13699423 - MGP_129S1SvImJ_P0043319 Fgd4 protein_coding protein_coding MGP_129S1SvImJ_T0043320.1 MGP_129S1SvImJ_G0022558.1 mouse_genomes_project 16 13576723 13659422 - Fgd4 protein_coding retained_intron MGP_129S1SvImJ_T0043321.1 MGP_129S1SvImJ_G0022558.1 mouse_genomes_project 16 13589231 13698913 - Fgd4 protein_coding retained_intron MGP_129S1SvImJ_T0043322.1 MGP_129S1SvImJ_G0022558.1 mouse_genomes_project 16 13590210 13625012 - Fgd4 protein_coding retained_intron MGP_129S1SvImJ_T0044487.1 MGP_129S1SvImJ_G0022834.1 mouse_genomes_project 16 42812468 42869867 - MGP_129S1SvImJ_P0044487 Atp6v1a protein_coding protein_coding MGP_129S1SvImJ_T0044488.1 MGP_129S1SvImJ_G0022834.1 mouse_genomes_project 16 42812711 42869758 - MGP_129S1SvImJ_P0044488 Atp6v1a protein_coding protein_coding MGP_129S1SvImJ_T0044489.1 MGP_129S1SvImJ_G0022834.1 mouse_genomes_project 16 42825485 42869542 - Atp6v1a protein_coding retained_intron MGP_129S1SvImJ_T0044490.1 MGP_129S1SvImJ_G0022834.1 mouse_genomes_project 16 42837369 42870192 - MGP_129S1SvImJ_P0044490 Atp6v1a protein_coding protein_coding MGP_129S1SvImJ_T0044491.1 MGP_129S1SvImJ_G0022834.1 mouse_genomes_project 16 42837492 42869580 - MGP_129S1SvImJ_P0044491 Atp6v1a protein_coding protein_coding MGP_129S1SvImJ_T0044492.1 MGP_129S1SvImJ_G0022834.1 mouse_genomes_project 16 42839565 42870267 - MGP_129S1SvImJ_P0044492 Atp6v1a protein_coding protein_coding MGP_129S1SvImJ_T0044794.1 MGP_129S1SvImJ_G0022920.1 mouse_genomes_project 16 58324267 58325832 - MGP_129S1SvImJ_P0044794 protein_coding protein_coding MGP_129S1SvImJ_T0102278.1 MGP_129S1SvImJ_G0040112.1 mouse_genomes_project 16 94818997 94821300 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0013183.1 MGP_129S1SvImJ_G0011272.1 mouse_genomes_project 16 34271723 34271996 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0043953.1 MGP_129S1SvImJ_G0022704.1 mouse_genomes_project 16 27066018 27221758 - MGP_129S1SvImJ_P0043953 Atp13a5 protein_coding protein_coding MGP_129S1SvImJ_T0043954.1 MGP_129S1SvImJ_G0022704.1 mouse_genomes_project 16 27066081 27221732 - MGP_129S1SvImJ_P0043954 Atp13a5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043955.1 MGP_129S1SvImJ_G0022704.1 mouse_genomes_project 16 27066627 27221693 - MGP_129S1SvImJ_P0043955 Atp13a5 protein_coding protein_coding MGP_129S1SvImJ_T0043956.1 MGP_129S1SvImJ_G0022704.1 mouse_genomes_project 16 27174594 27221609 - MGP_129S1SvImJ_P0043956 Atp13a5 protein_coding protein_coding MGP_129S1SvImJ_T0044633.1 MGP_129S1SvImJ_G0022871.1 mouse_genomes_project 16 47874759 47900275 + MGP_129S1SvImJ_P0044633 C330027C09Rik protein_coding protein_coding MGP_129S1SvImJ_T0044634.1 MGP_129S1SvImJ_G0022871.1 mouse_genomes_project 16 47874762 47900275 + MGP_129S1SvImJ_P0044634 C330027C09Rik protein_coding protein_coding MGP_129S1SvImJ_T0044635.1 MGP_129S1SvImJ_G0022871.1 mouse_genomes_project 16 47874797 47881645 + MGP_129S1SvImJ_P0044635 C330027C09Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044636.1 MGP_129S1SvImJ_G0022871.1 mouse_genomes_project 16 47881423 47882630 + C330027C09Rik protein_coding retained_intron MGP_129S1SvImJ_T0044637.1 MGP_129S1SvImJ_G0022871.1 mouse_genomes_project 16 47888986 47900221 + C330027C09Rik protein_coding retained_intron MGP_129S1SvImJ_T0044638.1 MGP_129S1SvImJ_G0022871.1 mouse_genomes_project 16 47891009 47893870 + C330027C09Rik protein_coding retained_intron MGP_129S1SvImJ_T0044639.1 MGP_129S1SvImJ_G0022871.1 mouse_genomes_project 16 47893874 47894929 + C330027C09Rik protein_coding retained_intron MGP_129S1SvImJ_T0044640.1 MGP_129S1SvImJ_G0022871.1 mouse_genomes_project 16 47896416 47900279 + C330027C09Rik protein_coding retained_intron MGP_129S1SvImJ_T0043806.1 MGP_129S1SvImJ_G0022658.1 mouse_genomes_project 16 18621140 18639680 + MGP_129S1SvImJ_P0043806 Ephb3 protein_coding protein_coding MGP_129S1SvImJ_T0043807.1 MGP_129S1SvImJ_G0022658.1 mouse_genomes_project 16 18627480 18639347 + MGP_129S1SvImJ_P0043807 Ephb3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043808.1 MGP_129S1SvImJ_G0022658.1 mouse_genomes_project 16 18633196 18639681 + Ephb3 protein_coding retained_intron MGP_129S1SvImJ_T0043809.1 MGP_129S1SvImJ_G0022658.1 mouse_genomes_project 16 18638065 18639067 + Ephb3 protein_coding retained_intron MGP_129S1SvImJ_T0043021.1 MGP_129S1SvImJ_G0022480.1 mouse_genomes_project 16 1533430 1534449 + MGP_129S1SvImJ_P0043021 Smim22 protein_coding protein_coding MGP_129S1SvImJ_T0043022.1 MGP_129S1SvImJ_G0022480.1 mouse_genomes_project 16 1533458 1534185 + Smim22 protein_coding retained_intron MGP_129S1SvImJ_T0043023.1 MGP_129S1SvImJ_G0022480.1 mouse_genomes_project 16 1533479 1534452 + MGP_129S1SvImJ_P0043023 Smim22 protein_coding protein_coding MGP_129S1SvImJ_T0043024.1 MGP_129S1SvImJ_G0022480.1 mouse_genomes_project 16 1533494 1534452 + Smim22 protein_coding processed_transcript MGP_129S1SvImJ_T0043025.1 MGP_129S1SvImJ_G0022480.1 mouse_genomes_project 16 1533494 1534452 + MGP_129S1SvImJ_P0043025 Smim22 protein_coding protein_coding MGP_129S1SvImJ_T0043026.1 MGP_129S1SvImJ_G0022480.1 mouse_genomes_project 16 1533494 1534449 + MGP_129S1SvImJ_P0043026 Smim22 protein_coding protein_coding MGP_129S1SvImJ_T0043027.1 MGP_129S1SvImJ_G0022480.1 mouse_genomes_project 16 1533501 1534452 + Smim22 protein_coding processed_transcript MGP_129S1SvImJ_T0043028.1 MGP_129S1SvImJ_G0022480.1 mouse_genomes_project 16 1533910 1534452 + Smim22 protein_coding retained_intron MGP_129S1SvImJ_T0100774.1 MGP_129S1SvImJ_G0038841.1 mouse_genomes_project 16 20670995 20671120 + Gm24201 snoRNA snoRNA MGP_129S1SvImJ_T0013163.1 MGP_129S1SvImJ_G0011252.1 mouse_genomes_project 16 16298950 16299373 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013173.1 MGP_129S1SvImJ_G0011262.1 mouse_genomes_project 16 20765580 20766607 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0043905.1 MGP_129S1SvImJ_G0022684.1 mouse_genomes_project 16 21034889 21104658 - MGP_129S1SvImJ_P0043905 Masp1 protein_coding protein_coding MGP_129S1SvImJ_T0043906.1 MGP_129S1SvImJ_G0022684.1 mouse_genomes_project 16 21064056 21104618 - MGP_129S1SvImJ_P0043906 Masp1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0044318.1 MGP_129S1SvImJ_G0022794.1 mouse_genomes_project 16 35240702 35243904 + Iqcb1 protein_coding processed_transcript MGP_129S1SvImJ_T0044319.1 MGP_129S1SvImJ_G0022794.1 mouse_genomes_project 16 35240724 35294219 + MGP_129S1SvImJ_P0044319 Iqcb1 protein_coding protein_coding MGP_129S1SvImJ_T0044320.1 MGP_129S1SvImJ_G0022794.1 mouse_genomes_project 16 35240725 35294211 + MGP_129S1SvImJ_P0044320 Iqcb1 protein_coding protein_coding MGP_129S1SvImJ_T0044321.1 MGP_129S1SvImJ_G0022794.1 mouse_genomes_project 16 35260187 35265967 + Iqcb1 protein_coding retained_intron MGP_129S1SvImJ_T0044322.1 MGP_129S1SvImJ_G0022794.1 mouse_genomes_project 16 35260582 35265985 + Iqcb1 protein_coding processed_transcript MGP_129S1SvImJ_T0044323.1 MGP_129S1SvImJ_G0022794.1 mouse_genomes_project 16 35265846 35276214 + Iqcb1 protein_coding processed_transcript MGP_129S1SvImJ_T0044324.1 MGP_129S1SvImJ_G0022794.1 mouse_genomes_project 16 35266189 35273085 + Iqcb1 protein_coding processed_transcript MGP_129S1SvImJ_T0043323.1 MGP_129S1SvImJ_G0022559.1 mouse_genomes_project 16 13771430 13772572 - MGP_129S1SvImJ_P0043323 Olfr19 protein_coding protein_coding MGP_129S1SvImJ_T0043324.1 MGP_129S1SvImJ_G0022559.1 mouse_genomes_project 16 13771889 13774960 - MGP_129S1SvImJ_P0043324 Olfr19 protein_coding protein_coding MGP_129S1SvImJ_T0043338.1 MGP_129S1SvImJ_G0022564.1 mouse_genomes_project 16 13964804 13979874 + MGP_129S1SvImJ_P0043338 Top3b protein_coding protein_coding MGP_129S1SvImJ_T0043339.1 MGP_129S1SvImJ_G0022564.1 mouse_genomes_project 16 13964825 13987010 + MGP_129S1SvImJ_P0043339 Top3b protein_coding protein_coding MGP_129S1SvImJ_T0043340.1 MGP_129S1SvImJ_G0022564.1 mouse_genomes_project 16 13964835 13973357 + MGP_129S1SvImJ_P0043340 Top3b protein_coding protein_coding MGP_129S1SvImJ_T0043341.1 MGP_129S1SvImJ_G0022564.1 mouse_genomes_project 16 13964842 13977558 + MGP_129S1SvImJ_P0043341 Top3b protein_coding protein_coding MGP_129S1SvImJ_T0043342.1 MGP_129S1SvImJ_G0022564.1 mouse_genomes_project 16 13964849 13987015 + MGP_129S1SvImJ_P0043342 Top3b protein_coding protein_coding MGP_129S1SvImJ_T0043343.1 MGP_129S1SvImJ_G0022564.1 mouse_genomes_project 16 13964854 13979491 + Top3b protein_coding retained_intron MGP_129S1SvImJ_T0043344.1 MGP_129S1SvImJ_G0022564.1 mouse_genomes_project 16 13964855 13974681 + MGP_129S1SvImJ_P0043344 Top3b protein_coding protein_coding MGP_129S1SvImJ_T0043345.1 MGP_129S1SvImJ_G0022564.1 mouse_genomes_project 16 13964868 13973372 + Top3b protein_coding retained_intron MGP_129S1SvImJ_T0043346.1 MGP_129S1SvImJ_G0022564.1 mouse_genomes_project 16 13964875 13973084 + MGP_129S1SvImJ_P0043346 Top3b protein_coding protein_coding MGP_129S1SvImJ_T0043347.1 MGP_129S1SvImJ_G0022564.1 mouse_genomes_project 16 13964885 13987015 + Top3b protein_coding retained_intron MGP_129S1SvImJ_T0043348.1 MGP_129S1SvImJ_G0022564.1 mouse_genomes_project 16 13964908 13973019 + MGP_129S1SvImJ_P0043348 Top3b protein_coding protein_coding MGP_129S1SvImJ_T0043349.1 MGP_129S1SvImJ_G0022564.1 mouse_genomes_project 16 13965033 13973499 + Top3b protein_coding retained_intron MGP_129S1SvImJ_T0043350.1 MGP_129S1SvImJ_G0022564.1 mouse_genomes_project 16 13977473 13986998 + MGP_129S1SvImJ_P0043350 Top3b protein_coding protein_coding MGP_129S1SvImJ_T0043351.1 MGP_129S1SvImJ_G0022564.1 mouse_genomes_project 16 13978243 13987015 + Top3b protein_coding retained_intron MGP_129S1SvImJ_T0043352.1 MGP_129S1SvImJ_G0022564.1 mouse_genomes_project 16 13979550 13980731 + Top3b protein_coding retained_intron MGP_129S1SvImJ_T0043353.1 MGP_129S1SvImJ_G0022564.1 mouse_genomes_project 16 13980668 13981735 + Top3b protein_coding retained_intron MGP_129S1SvImJ_T0043354.1 MGP_129S1SvImJ_G0022564.1 mouse_genomes_project 16 13980934 13981912 + Top3b protein_coding retained_intron MGP_129S1SvImJ_T0043355.1 MGP_129S1SvImJ_G0022564.1 mouse_genomes_project 16 13981863 13987000 + Top3b protein_coding retained_intron MGP_129S1SvImJ_T0043356.1 MGP_129S1SvImJ_G0022564.1 mouse_genomes_project 16 13984250 13986525 + MGP_129S1SvImJ_P0043356 Top3b protein_coding protein_coding MGP_129S1SvImJ_T0043357.1 MGP_129S1SvImJ_G0022564.1 mouse_genomes_project 16 13985526 13986444 + Top3b protein_coding retained_intron MGP_129S1SvImJ_T0043866.1 MGP_129S1SvImJ_G0022677.1 mouse_genomes_project 16 20606274 20632317 + MGP_129S1SvImJ_P0043866 Kng1 protein_coding protein_coding MGP_129S1SvImJ_T0045184.1 MGP_129S1SvImJ_G0023053.1 mouse_genomes_project 16 93373719 93379460 + MGP_129S1SvImJ_P0045184 Kcne2 protein_coding protein_coding MGP_129S1SvImJ_T0045185.1 MGP_129S1SvImJ_G0023053.1 mouse_genomes_project 16 93376946 93379460 + MGP_129S1SvImJ_P0045185 Kcne2 protein_coding protein_coding MGP_129S1SvImJ_T0010182.1 MGP_129S1SvImJ_G0008298.1 mouse_genomes_project 16 94514527 94514624 + Mir802 miRNA miRNA MGP_129S1SvImJ_T0006876.1 MGP_129S1SvImJ_G0005672.1 mouse_genomes_project 16 58741653 58748746 - 1700022E09Rik lincRNA lincRNA MGP_129S1SvImJ_T0006877.1 MGP_129S1SvImJ_G0005672.1 mouse_genomes_project 16 58745516 58748780 - 1700022E09Rik lincRNA lincRNA MGP_129S1SvImJ_T0017556.1 MGP_129S1SvImJ_G0015328.1 mouse_genomes_project 16 92470725 92476021 + A930006K02Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0043573.1 MGP_129S1SvImJ_G0022608.1 mouse_genomes_project 16 15517065 15542524 - MGP_129S1SvImJ_P0043573 Tango2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043574.1 MGP_129S1SvImJ_G0022608.1 mouse_genomes_project 16 15517067 15563917 - MGP_129S1SvImJ_P0043574 Tango2 protein_coding protein_coding MGP_129S1SvImJ_T0043575.1 MGP_129S1SvImJ_G0022608.1 mouse_genomes_project 16 15517463 15520386 - Tango2 protein_coding retained_intron MGP_129S1SvImJ_T0043576.1 MGP_129S1SvImJ_G0022608.1 mouse_genomes_project 16 15524227 15527694 - Tango2 protein_coding processed_transcript MGP_129S1SvImJ_T0043577.1 MGP_129S1SvImJ_G0022608.1 mouse_genomes_project 16 15527020 15529263 - Tango2 protein_coding retained_intron MGP_129S1SvImJ_T0043578.1 MGP_129S1SvImJ_G0022608.1 mouse_genomes_project 16 15527128 15568100 - MGP_129S1SvImJ_P0043578 Tango2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043579.1 MGP_129S1SvImJ_G0022608.1 mouse_genomes_project 16 15527136 15563892 - MGP_129S1SvImJ_P0043579 Tango2 protein_coding protein_coding MGP_129S1SvImJ_T0043580.1 MGP_129S1SvImJ_G0022608.1 mouse_genomes_project 16 15528653 15542525 - Tango2 protein_coding retained_intron MGP_129S1SvImJ_T0043581.1 MGP_129S1SvImJ_G0022608.1 mouse_genomes_project 16 15533737 15542525 - Tango2 protein_coding retained_intron MGP_129S1SvImJ_T0043582.1 MGP_129S1SvImJ_G0022608.1 mouse_genomes_project 16 15538924 15568080 - Tango2 protein_coding retained_intron MGP_129S1SvImJ_T0006852.1 MGP_129S1SvImJ_G0005653.1 mouse_genomes_project 16 27763750 27805175 - Gm26569 lincRNA lincRNA MGP_129S1SvImJ_T0099515.1 MGP_129S1SvImJ_G0037582.1 mouse_genomes_project 16 34777918 34778023 + Gm24569 snRNA snRNA MGP_129S1SvImJ_T0044958.1 MGP_129S1SvImJ_G0022979.1 mouse_genomes_project 16 88205869 88218231 - MGP_129S1SvImJ_P0044958 Cct8 protein_coding protein_coding MGP_129S1SvImJ_T0044959.1 MGP_129S1SvImJ_G0022979.1 mouse_genomes_project 16 88206531 88218146 - MGP_129S1SvImJ_P0044959 Cct8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044960.1 MGP_129S1SvImJ_G0022979.1 mouse_genomes_project 16 88206531 88218146 - MGP_129S1SvImJ_P0044960 Cct8 protein_coding protein_coding MGP_129S1SvImJ_T0044961.1 MGP_129S1SvImJ_G0022979.1 mouse_genomes_project 16 88207454 88211200 - MGP_129S1SvImJ_P0044961 Cct8 protein_coding protein_coding MGP_129S1SvImJ_T0044962.1 MGP_129S1SvImJ_G0022979.1 mouse_genomes_project 16 88207871 88208503 - Cct8 protein_coding retained_intron MGP_129S1SvImJ_T0044963.1 MGP_129S1SvImJ_G0022979.1 mouse_genomes_project 16 88208011 88208788 - Cct8 protein_coding retained_intron MGP_129S1SvImJ_T0044964.1 MGP_129S1SvImJ_G0022979.1 mouse_genomes_project 16 88208159 88208930 - Cct8 protein_coding retained_intron MGP_129S1SvImJ_T0044965.1 MGP_129S1SvImJ_G0022979.1 mouse_genomes_project 16 88211201 88213805 - Cct8 protein_coding processed_transcript MGP_129S1SvImJ_T0044966.1 MGP_129S1SvImJ_G0022979.1 mouse_genomes_project 16 88211287 88218217 - MGP_129S1SvImJ_P0044966 Cct8 protein_coding protein_coding MGP_129S1SvImJ_T0044967.1 MGP_129S1SvImJ_G0022979.1 mouse_genomes_project 16 88212844 88218062 - MGP_129S1SvImJ_P0044967 Cct8 protein_coding protein_coding MGP_129S1SvImJ_T0013222.1 MGP_129S1SvImJ_G0011311.1 mouse_genomes_project 16 88272073 88272463 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003670.1 MGP_129S1SvImJ_G0003321.1 mouse_genomes_project 16 1241420 1242361 + Gm15859 antisense antisense MGP_129S1SvImJ_T0013161.1 MGP_129S1SvImJ_G0011250.1 mouse_genomes_project 16 16212353 16212761 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0044446.1 MGP_129S1SvImJ_G0022827.1 mouse_genomes_project 16 41558566 42161989 + Zbtb20 protein_coding retained_intron MGP_129S1SvImJ_T0044447.1 MGP_129S1SvImJ_G0022827.1 mouse_genomes_project 16 41594236 41764870 + Zbtb20 protein_coding processed_transcript MGP_129S1SvImJ_T0044448.1 MGP_129S1SvImJ_G0022827.1 mouse_genomes_project 16 41594386 42272004 + Zbtb20 protein_coding processed_transcript MGP_129S1SvImJ_T0044449.1 MGP_129S1SvImJ_G0022827.1 mouse_genomes_project 16 41594489 42279817 + MGP_129S1SvImJ_P0044449 Zbtb20 protein_coding protein_coding MGP_129S1SvImJ_T0044450.1 MGP_129S1SvImJ_G0022827.1 mouse_genomes_project 16 41594496 42161888 + Zbtb20 protein_coding retained_intron MGP_129S1SvImJ_T0044451.1 MGP_129S1SvImJ_G0022827.1 mouse_genomes_project 16 41927436 42313752 + MGP_129S1SvImJ_P0044451 Zbtb20 protein_coding protein_coding MGP_129S1SvImJ_T0044452.1 MGP_129S1SvImJ_G0022827.1 mouse_genomes_project 16 41927595 41995759 + Zbtb20 protein_coding retained_intron MGP_129S1SvImJ_T0044453.1 MGP_129S1SvImJ_G0022827.1 mouse_genomes_project 16 42059708 42271984 + Zbtb20 protein_coding processed_transcript MGP_129S1SvImJ_T0044454.1 MGP_129S1SvImJ_G0022827.1 mouse_genomes_project 16 42060124 42280843 + Zbtb20 protein_coding retained_intron MGP_129S1SvImJ_T0044455.1 MGP_129S1SvImJ_G0022827.1 mouse_genomes_project 16 42060524 42313699 + MGP_129S1SvImJ_P0044455 Zbtb20 protein_coding protein_coding MGP_129S1SvImJ_T0044456.1 MGP_129S1SvImJ_G0022827.1 mouse_genomes_project 16 42060855 42313706 + MGP_129S1SvImJ_P0044456 Zbtb20 protein_coding protein_coding MGP_129S1SvImJ_T0044457.1 MGP_129S1SvImJ_G0022827.1 mouse_genomes_project 16 42203201 42279285 + MGP_129S1SvImJ_P0044457 Zbtb20 protein_coding protein_coding MGP_129S1SvImJ_T0044458.1 MGP_129S1SvImJ_G0022827.1 mouse_genomes_project 16 42203209 42273995 + MGP_129S1SvImJ_P0044458 Zbtb20 protein_coding protein_coding MGP_129S1SvImJ_T0044459.1 MGP_129S1SvImJ_G0022827.1 mouse_genomes_project 16 42203229 42313941 + MGP_129S1SvImJ_P0044459 Zbtb20 protein_coding protein_coding MGP_129S1SvImJ_T0044460.1 MGP_129S1SvImJ_G0022827.1 mouse_genomes_project 16 42203284 42279266 + Zbtb20 protein_coding processed_transcript MGP_129S1SvImJ_T0044461.1 MGP_129S1SvImJ_G0022827.1 mouse_genomes_project 16 42208957 42272004 + Zbtb20 protein_coding processed_transcript MGP_129S1SvImJ_T0044462.1 MGP_129S1SvImJ_G0022827.1 mouse_genomes_project 16 42269370 42322927 + MGP_129S1SvImJ_P0044462 Zbtb20 protein_coding protein_coding MGP_129S1SvImJ_T0043335.1 MGP_129S1SvImJ_G0022562.1 mouse_genomes_project 16 13960053 13960800 - MGP_129S1SvImJ_P0043335 protein_coding protein_coding MGP_129S1SvImJ_T0043294.1 MGP_129S1SvImJ_G0022552.1 mouse_genomes_project 16 12714768 12769407 + Prkdc protein_coding retained_intron MGP_129S1SvImJ_T0043295.1 MGP_129S1SvImJ_G0022552.1 mouse_genomes_project 16 12714791 12932615 + MGP_129S1SvImJ_P0043295 Prkdc protein_coding protein_coding MGP_129S1SvImJ_T0100780.1 MGP_129S1SvImJ_G0038847.1 mouse_genomes_project 16 29739422 29739565 - Gm24879 snoRNA snoRNA MGP_129S1SvImJ_T0042891.1 MGP_129S1SvImJ_G0022451.1 mouse_genomes_project 16 286409 299110 + MGP_129S1SvImJ_P0042891 Zfp174 protein_coding protein_coding MGP_129S1SvImJ_T0043630.1 MGP_129S1SvImJ_G0022618.1 mouse_genomes_project 16 16036412 16073956 - MGP_129S1SvImJ_P0043630 Cdc45 protein_coding protein_coding MGP_129S1SvImJ_T0043631.1 MGP_129S1SvImJ_G0022618.1 mouse_genomes_project 16 16036418 16073610 - MGP_129S1SvImJ_P0043631 Cdc45 protein_coding protein_coding MGP_129S1SvImJ_T0043632.1 MGP_129S1SvImJ_G0022618.1 mouse_genomes_project 16 16069339 16073971 - MGP_129S1SvImJ_P0043632 Cdc45 protein_coding protein_coding MGP_129S1SvImJ_T0045092.1 MGP_129S1SvImJ_G0023039.1 mouse_genomes_project 16 92394296 92425896 + MGP_129S1SvImJ_P0045092 Gm21970 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045093.1 MGP_129S1SvImJ_G0023039.1 mouse_genomes_project 16 92394296 92425896 + MGP_129S1SvImJ_P0045093 Gm21970 protein_coding protein_coding MGP_129S1SvImJ_T0000973.1 MGP_129S1SvImJ_G0000905.1 mouse_genomes_project 16 351425 351793 - TEC TEC MGP_129S1SvImJ_T0000974.1 MGP_129S1SvImJ_G0000905.1 mouse_genomes_project 16 351457 351793 - TEC TEC MGP_129S1SvImJ_T0013144.1 MGP_129S1SvImJ_G0011233.1 mouse_genomes_project 16 8040975 8041942 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0045188.1 MGP_129S1SvImJ_G0023055.1 mouse_genomes_project 16 93401064 93403743 - MGP_129S1SvImJ_P0045188 4930563D23Rik protein_coding protein_coding MGP_129S1SvImJ_T0006834.1 MGP_129S1SvImJ_G0005638.1 mouse_genomes_project 16 7851972 7859887 + Gm4262 lincRNA lincRNA MGP_129S1SvImJ_T0044357.1 MGP_129S1SvImJ_G0022800.1 mouse_genomes_project 16 35973688 36006118 - MGP_129S1SvImJ_P0044357 Gtf2e1 protein_coding protein_coding MGP_129S1SvImJ_T0044358.1 MGP_129S1SvImJ_G0022800.1 mouse_genomes_project 16 35998848 36006105 - Gtf2e1 protein_coding retained_intron MGP_129S1SvImJ_T0045235.1 MGP_129S1SvImJ_G0023068.1 mouse_genomes_project 16 95351649 95522701 - MGP_129S1SvImJ_P0045235 Hlcs protein_coding protein_coding MGP_129S1SvImJ_T0043029.1 MGP_129S1SvImJ_G0022481.1 mouse_genomes_project 16 1534876 1539654 - MGP_129S1SvImJ_P0043029 Rogdi protein_coding protein_coding MGP_129S1SvImJ_T0043030.1 MGP_129S1SvImJ_G0022481.1 mouse_genomes_project 16 1534876 1539664 - MGP_129S1SvImJ_P0043030 Rogdi protein_coding protein_coding MGP_129S1SvImJ_T0043031.1 MGP_129S1SvImJ_G0022481.1 mouse_genomes_project 16 1534901 1539654 - MGP_129S1SvImJ_P0043031 Rogdi protein_coding protein_coding MGP_129S1SvImJ_T0043032.1 MGP_129S1SvImJ_G0022481.1 mouse_genomes_project 16 1535131 1536799 - Rogdi protein_coding retained_intron MGP_129S1SvImJ_T0043033.1 MGP_129S1SvImJ_G0022481.1 mouse_genomes_project 16 1535370 1536256 - Rogdi protein_coding retained_intron MGP_129S1SvImJ_T0043034.1 MGP_129S1SvImJ_G0022481.1 mouse_genomes_project 16 1536045 1537963 - Rogdi protein_coding retained_intron MGP_129S1SvImJ_T0043035.1 MGP_129S1SvImJ_G0022481.1 mouse_genomes_project 16 1536182 1537879 - Rogdi protein_coding retained_intron MGP_129S1SvImJ_T0043036.1 MGP_129S1SvImJ_G0022481.1 mouse_genomes_project 16 1536994 1539622 - MGP_129S1SvImJ_P0043036 Rogdi protein_coding protein_coding MGP_129S1SvImJ_T0043037.1 MGP_129S1SvImJ_G0022481.1 mouse_genomes_project 16 1537846 1539690 - Rogdi protein_coding retained_intron MGP_129S1SvImJ_T0043038.1 MGP_129S1SvImJ_G0022481.1 mouse_genomes_project 16 1538306 1539673 - Rogdi protein_coding retained_intron MGP_129S1SvImJ_T0098330.1 MGP_129S1SvImJ_G0036415.1 mouse_genomes_project 16 90274336 90274732 - pseudogene pseudogene MGP_129S1SvImJ_T0043838.1 MGP_129S1SvImJ_G0022667.1 mouse_genomes_project 16 19711269 19712385 + MGP_129S1SvImJ_P0043838 Tmem97 protein_coding protein_coding MGP_129S1SvImJ_T0100788.1 MGP_129S1SvImJ_G0038855.1 mouse_genomes_project 16 42549044 42549173 - Gm26074 snoRNA snoRNA MGP_129S1SvImJ_T0000042.1 MGP_129S1SvImJ_G0000035.1 mouse_genomes_project 16 16476986 16477028 - MGP_129S1SvImJ_P0000042 Iglj4 IG_J_gene IG_J_gene MGP_129S1SvImJ_T0044463.1 MGP_129S1SvImJ_G0022828.1 mouse_genomes_project 16 42354011 42371251 - MGP_129S1SvImJ_P0044463 Tigit protein_coding protein_coding MGP_129S1SvImJ_T0044375.1 MGP_129S1SvImJ_G0022805.1 mouse_genomes_project 16 36338903 36344419 - Gm36028 protein_coding retained_intron MGP_129S1SvImJ_T0044376.1 MGP_129S1SvImJ_G0022805.1 mouse_genomes_project 16 36338903 36349137 - MGP_129S1SvImJ_P0044376 Gm36028 protein_coding protein_coding MGP_129S1SvImJ_T0042990.1 MGP_129S1SvImJ_G0022470.1 mouse_genomes_project 16 1220251 1230661 - MGP_129S1SvImJ_P0042990 Nmral1 protein_coding protein_coding MGP_129S1SvImJ_T0042991.1 MGP_129S1SvImJ_G0022470.1 mouse_genomes_project 16 1221509 1230708 - MGP_129S1SvImJ_P0042991 Nmral1 protein_coding protein_coding MGP_129S1SvImJ_T0042992.1 MGP_129S1SvImJ_G0022470.1 mouse_genomes_project 16 1221509 1230908 - MGP_129S1SvImJ_P0042992 Nmral1 protein_coding protein_coding MGP_129S1SvImJ_T0042993.1 MGP_129S1SvImJ_G0022470.1 mouse_genomes_project 16 1222487 1230664 - MGP_129S1SvImJ_P0042993 Nmral1 protein_coding protein_coding MGP_129S1SvImJ_T0042994.1 MGP_129S1SvImJ_G0022470.1 mouse_genomes_project 16 1224701 1230640 - Nmral1 protein_coding retained_intron MGP_129S1SvImJ_T0042995.1 MGP_129S1SvImJ_G0022470.1 mouse_genomes_project 16 1226017 1230656 - Nmral1 protein_coding retained_intron MGP_129S1SvImJ_T0044565.1 MGP_129S1SvImJ_G0022851.1 mouse_genomes_project 16 44175874 44203440 - MGP_129S1SvImJ_P0044565 Cd200 protein_coding protein_coding MGP_129S1SvImJ_T0044566.1 MGP_129S1SvImJ_G0022851.1 mouse_genomes_project 16 44175922 44203262 - MGP_129S1SvImJ_P0044566 Cd200 protein_coding protein_coding MGP_129S1SvImJ_T0044567.1 MGP_129S1SvImJ_G0022851.1 mouse_genomes_project 16 44177049 44203359 - Cd200 protein_coding processed_transcript MGP_129S1SvImJ_T0044568.1 MGP_129S1SvImJ_G0022851.1 mouse_genomes_project 16 44185964 44195032 - MGP_129S1SvImJ_P0044568 Cd200 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044569.1 MGP_129S1SvImJ_G0022851.1 mouse_genomes_project 16 44185964 44203300 - MGP_129S1SvImJ_P0044569 Cd200 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044570.1 MGP_129S1SvImJ_G0022851.1 mouse_genomes_project 16 44188339 44203410 - Cd200 protein_coding processed_transcript MGP_129S1SvImJ_T0044571.1 MGP_129S1SvImJ_G0022851.1 mouse_genomes_project 16 44188567 44203428 - Cd200 protein_coding processed_transcript MGP_129S1SvImJ_T0044572.1 MGP_129S1SvImJ_G0022851.1 mouse_genomes_project 16 44190672 44203404 - Cd200 protein_coding processed_transcript MGP_129S1SvImJ_T0044573.1 MGP_129S1SvImJ_G0022851.1 mouse_genomes_project 16 44194291 44203251 - Cd200 protein_coding retained_intron MGP_129S1SvImJ_T0044574.1 MGP_129S1SvImJ_G0022851.1 mouse_genomes_project 16 44195012 44203394 - Cd200 protein_coding processed_transcript MGP_129S1SvImJ_T0044575.1 MGP_129S1SvImJ_G0022851.1 mouse_genomes_project 16 44201625 44203405 - Cd200 protein_coding processed_transcript MGP_129S1SvImJ_T0017535.1 MGP_129S1SvImJ_G0015324.1 mouse_genomes_project 16 77331515 77467927 + processed_transcript lincRNA MGP_129S1SvImJ_T0017536.1 MGP_129S1SvImJ_G0015324.1 mouse_genomes_project 16 77331515 77728827 + processed_transcript lincRNA MGP_129S1SvImJ_T0017537.1 MGP_129S1SvImJ_G0015324.1 mouse_genomes_project 16 77331517 77727358 + processed_transcript lincRNA MGP_129S1SvImJ_T0017538.1 MGP_129S1SvImJ_G0015324.1 mouse_genomes_project 16 77431855 77811897 + processed_transcript lincRNA MGP_129S1SvImJ_T0017539.1 MGP_129S1SvImJ_G0015324.1 mouse_genomes_project 16 77431863 77465069 + processed_transcript lincRNA MGP_129S1SvImJ_T0017540.1 MGP_129S1SvImJ_G0015324.1 mouse_genomes_project 16 77431880 77725328 + processed_transcript lincRNA MGP_129S1SvImJ_T0017541.1 MGP_129S1SvImJ_G0015324.1 mouse_genomes_project 16 77431934 77728848 + processed_transcript lincRNA MGP_129S1SvImJ_T0017542.1 MGP_129S1SvImJ_G0015324.1 mouse_genomes_project 16 77432003 77681744 + processed_transcript lincRNA MGP_129S1SvImJ_T0017543.1 MGP_129S1SvImJ_G0015324.1 mouse_genomes_project 16 77432179 77823724 + processed_transcript lincRNA MGP_129S1SvImJ_T0017544.1 MGP_129S1SvImJ_G0015324.1 mouse_genomes_project 16 77574170 77576654 + processed_transcript TEC MGP_129S1SvImJ_T0017545.1 MGP_129S1SvImJ_G0015324.1 mouse_genomes_project 16 77620844 77728943 + processed_transcript lincRNA MGP_129S1SvImJ_T0017546.1 MGP_129S1SvImJ_G0015324.1 mouse_genomes_project 16 77621008 77823728 + processed_transcript lincRNA MGP_129S1SvImJ_T0017547.1 MGP_129S1SvImJ_G0015324.1 mouse_genomes_project 16 77724231 77726478 + processed_transcript TEC MGP_129S1SvImJ_T0017548.1 MGP_129S1SvImJ_G0015324.1 mouse_genomes_project 16 77724769 77725371 + processed_transcript lincRNA MGP_129S1SvImJ_T0017549.1 MGP_129S1SvImJ_G0015324.1 mouse_genomes_project 16 77802298 77823722 + processed_transcript lincRNA MGP_129S1SvImJ_T0017550.1 MGP_129S1SvImJ_G0015324.1 mouse_genomes_project 16 77811608 77823722 + processed_transcript lincRNA MGP_129S1SvImJ_T0100790.1 MGP_129S1SvImJ_G0038857.1 mouse_genomes_project 16 45041147 45041279 + Gm26297 snoRNA snoRNA MGP_129S1SvImJ_T0043626.1 MGP_129S1SvImJ_G0022615.1 mouse_genomes_project 16 15862908 15864993 - MGP_129S1SvImJ_P0043626 Gp1bb protein_coding protein_coding MGP_129S1SvImJ_T0043627.1 MGP_129S1SvImJ_G0022615.1 mouse_genomes_project 16 15863311 15863956 - MGP_129S1SvImJ_P0043627 Gp1bb protein_coding protein_coding MGP_129S1SvImJ_T0100785.1 MGP_129S1SvImJ_G0038852.1 mouse_genomes_project 16 36669802 36669935 + Gm25617 snoRNA snoRNA MGP_129S1SvImJ_T0043400.1 MGP_129S1SvImJ_G0022573.1 mouse_genomes_project 16 14276824 14334125 - MGP_129S1SvImJ_P0043400 Ube2l3 protein_coding protein_coding MGP_129S1SvImJ_T0043401.1 MGP_129S1SvImJ_G0022573.1 mouse_genomes_project 16 14276826 14332968 - MGP_129S1SvImJ_P0043401 Ube2l3 protein_coding protein_coding MGP_129S1SvImJ_T0043402.1 MGP_129S1SvImJ_G0022573.1 mouse_genomes_project 16 14277129 14284900 - Ube2l3 protein_coding processed_transcript MGP_129S1SvImJ_T0043403.1 MGP_129S1SvImJ_G0022573.1 mouse_genomes_project 16 14278121 14332970 - MGP_129S1SvImJ_P0043403 Ube2l3 protein_coding protein_coding MGP_129S1SvImJ_T0043404.1 MGP_129S1SvImJ_G0022573.1 mouse_genomes_project 16 14282121 14332949 - Ube2l3 protein_coding retained_intron MGP_129S1SvImJ_T0043854.1 MGP_129S1SvImJ_G0022672.1 mouse_genomes_project 16 20333243 20383721 - MGP_129S1SvImJ_P0043854 Tbccd1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0043527.1 MGP_129S1SvImJ_G0022596.1 mouse_genomes_project 16 15085512 15086899 + MGP_129S1SvImJ_P0043527 Tssk2 protein_coding protein_coding MGP_129S1SvImJ_T0043763.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18015712 18025835 + MGP_129S1SvImJ_P0043763 Eif4g1 protein_coding protein_coding MGP_129S1SvImJ_T0043764.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18015714 18025365 + MGP_129S1SvImJ_P0043764 Eif4g1 protein_coding protein_coding MGP_129S1SvImJ_T0043765.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18019162 18042822 + MGP_129S1SvImJ_P0043765 Eif4g1 protein_coding protein_coding MGP_129S1SvImJ_T0043766.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18019185 18042821 + MGP_129S1SvImJ_P0043766 Eif4g1 protein_coding protein_coding MGP_129S1SvImJ_T0043767.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18019188 18042819 + MGP_129S1SvImJ_P0043767 Eif4g1 protein_coding protein_coding MGP_129S1SvImJ_T0043768.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18019188 18030276 + MGP_129S1SvImJ_P0043768 Eif4g1 protein_coding protein_coding MGP_129S1SvImJ_T0043769.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18019194 18042821 + MGP_129S1SvImJ_P0043769 Eif4g1 protein_coding protein_coding MGP_129S1SvImJ_T0043770.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18019209 18030282 + MGP_129S1SvImJ_P0043770 Eif4g1 protein_coding protein_coding MGP_129S1SvImJ_T0043771.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18019210 18030282 + MGP_129S1SvImJ_P0043771 Eif4g1 protein_coding protein_coding MGP_129S1SvImJ_T0043772.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18019262 18025711 + MGP_129S1SvImJ_P0043772 Eif4g1 protein_coding protein_coding MGP_129S1SvImJ_T0043773.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18019262 18042822 + MGP_129S1SvImJ_P0043773 Eif4g1 protein_coding protein_coding MGP_129S1SvImJ_T0043774.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18019734 18042822 + MGP_129S1SvImJ_P0043774 Eif4g1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043775.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18019837 18024238 + MGP_129S1SvImJ_P0043775 Eif4g1 protein_coding protein_coding MGP_129S1SvImJ_T0043776.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18019859 18042821 + MGP_129S1SvImJ_P0043776 Eif4g1 protein_coding protein_coding MGP_129S1SvImJ_T0043777.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18019878 18025103 + MGP_129S1SvImJ_P0043777 Eif4g1 protein_coding protein_coding MGP_129S1SvImJ_T0043778.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18019956 18042819 + MGP_129S1SvImJ_P0043778 Eif4g1 protein_coding protein_coding MGP_129S1SvImJ_T0043779.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18020253 18025099 + MGP_129S1SvImJ_P0043779 Eif4g1 protein_coding protein_coding MGP_129S1SvImJ_T0043780.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18020550 18025114 + MGP_129S1SvImJ_P0043780 Eif4g1 protein_coding protein_coding MGP_129S1SvImJ_T0043781.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18024715 18042819 + Eif4g1 protein_coding retained_intron MGP_129S1SvImJ_T0043782.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18024845 18026025 + Eif4g1 protein_coding processed_transcript MGP_129S1SvImJ_T0043783.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18027478 18028173 + Eif4g1 protein_coding retained_intron MGP_129S1SvImJ_T0043784.1 MGP_129S1SvImJ_G0022651.1 mouse_genomes_project 16 18037095 18037782 + Eif4g1 protein_coding retained_intron MGP_129S1SvImJ_T0099507.1 MGP_129S1SvImJ_G0037574.1 mouse_genomes_project 16 33532672 33532800 - Gm25179 snRNA snRNA MGP_129S1SvImJ_T0100769.1 MGP_129S1SvImJ_G0038836.1 mouse_genomes_project 16 15447980 15448106 - Gm25777 snoRNA snoRNA MGP_129S1SvImJ_T0098329.1 MGP_129S1SvImJ_G0036414.1 mouse_genomes_project 16 89777922 89778158 - pseudogene pseudogene MGP_129S1SvImJ_T0017522.1 MGP_129S1SvImJ_G0015316.1 mouse_genomes_project 16 20743655 20797780 + B630019A10Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0044659.1 MGP_129S1SvImJ_G0022877.1 mouse_genomes_project 16 50966070 51153074 + MGP_129S1SvImJ_P0044659 Cblb protein_coding protein_coding MGP_129S1SvImJ_T0044660.1 MGP_129S1SvImJ_G0022877.1 mouse_genomes_project 16 50966186 51153081 + MGP_129S1SvImJ_P0044660 Cblb protein_coding unknown_likely_coding MGP_129S1SvImJ_T0043622.1 MGP_129S1SvImJ_G0022613.1 mouse_genomes_project 16 15729354 15732112 + MGP_129S1SvImJ_P0043622 Gm16314 protein_coding protein_coding MGP_129S1SvImJ_T0013179.1 MGP_129S1SvImJ_G0011268.1 mouse_genomes_project 16 29974369 29974814 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099537.1 MGP_129S1SvImJ_G0037604.1 mouse_genomes_project 16 92347873 92347956 - Gm24695 snRNA snRNA MGP_129S1SvImJ_T0044229.1 MGP_129S1SvImJ_G0022765.1 mouse_genomes_project 16 33310548 33401102 + MGP_129S1SvImJ_P0044229 Hacd2 protein_coding protein_coding MGP_129S1SvImJ_T0043431.1 MGP_129S1SvImJ_G0022578.1 mouse_genomes_project 16 14476633 14488837 + MGP_129S1SvImJ_P0043431 Serpind1 protein_coding protein_coding MGP_129S1SvImJ_T0043432.1 MGP_129S1SvImJ_G0022578.1 mouse_genomes_project 16 14476645 14488836 + MGP_129S1SvImJ_P0043432 Serpind1 protein_coding protein_coding MGP_129S1SvImJ_T0044993.1 MGP_129S1SvImJ_G0022998.1 mouse_genomes_project 16 89694212 89694664 - MGP_129S1SvImJ_P0044993 Krtap19-2 protein_coding protein_coding MGP_129S1SvImJ_T0044784.1 MGP_129S1SvImJ_G0022915.1 mouse_genomes_project 16 58206444 58211663 + MGP_129S1SvImJ_P0044784 Olfr183 protein_coding protein_coding MGP_129S1SvImJ_T0044785.1 MGP_129S1SvImJ_G0022915.1 mouse_genomes_project 16 58206463 58211199 + MGP_129S1SvImJ_P0044785 Olfr183 protein_coding protein_coding MGP_129S1SvImJ_T0043212.1 MGP_129S1SvImJ_G0022530.1 mouse_genomes_project 16 10209309 10377616 + MGP_129S1SvImJ_P0043212 Mkl2 protein_coding protein_coding MGP_129S1SvImJ_T0043213.1 MGP_129S1SvImJ_G0022530.1 mouse_genomes_project 16 10209334 10289996 + MGP_129S1SvImJ_P0043213 Mkl2 protein_coding protein_coding MGP_129S1SvImJ_T0043214.1 MGP_129S1SvImJ_G0022530.1 mouse_genomes_project 16 10217904 10289993 + MGP_129S1SvImJ_P0043214 Mkl2 protein_coding protein_coding MGP_129S1SvImJ_T0043215.1 MGP_129S1SvImJ_G0022530.1 mouse_genomes_project 16 10317864 10380009 + MGP_129S1SvImJ_P0043215 Mkl2 protein_coding protein_coding MGP_129S1SvImJ_T0099535.1 MGP_129S1SvImJ_G0037602.1 mouse_genomes_project 16 89425501 89425585 - Gm23587 snRNA snRNA MGP_129S1SvImJ_T0010173.1 MGP_129S1SvImJ_G0008289.1 mouse_genomes_project 16 77729355 77729420 + Mir99a miRNA miRNA MGP_129S1SvImJ_T0044620.1 MGP_129S1SvImJ_G0022864.1 mouse_genomes_project 16 47161864 47175097 + MGP_129S1SvImJ_P0044620 Dppa2 protein_coding protein_coding MGP_129S1SvImJ_T0000977.1 MGP_129S1SvImJ_G0000908.1 mouse_genomes_project 16 16510578 16514048 + TEC TEC MGP_129S1SvImJ_T0044280.1 MGP_129S1SvImJ_G0022784.1 mouse_genomes_project 16 34608885 34616295 + MGP_129S1SvImJ_P0044280 Gm5416 protein_coding protein_coding MGP_129S1SvImJ_T0044998.1 MGP_129S1SvImJ_G0023003.1 mouse_genomes_project 16 89752307 89752768 - MGP_129S1SvImJ_P0044998 Krtap19-9b protein_coding protein_coding MGP_129S1SvImJ_T0043286.1 MGP_129S1SvImJ_G0022546.1 mouse_genomes_project 16 11561775 11570813 + MGP_129S1SvImJ_P0043286 Gm1758 protein_coding protein_coding MGP_129S1SvImJ_T0100803.1 MGP_129S1SvImJ_G0038870.1 mouse_genomes_project 16 73991037 73991172 - Gm22163 snoRNA snoRNA MGP_129S1SvImJ_T0043928.1 MGP_129S1SvImJ_G0022694.1 mouse_genomes_project 16 24187261 24217760 + MGP_129S1SvImJ_P0043928 Cldn16 protein_coding protein_coding MGP_129S1SvImJ_T0043929.1 MGP_129S1SvImJ_G0022694.1 mouse_genomes_project 16 24187382 24217758 + MGP_129S1SvImJ_P0043929 Cldn16 protein_coding protein_coding MGP_129S1SvImJ_T0043983.1 MGP_129S1SvImJ_G0022711.1 mouse_genomes_project 16 28197152 28200247 - MGP_129S1SvImJ_P0043983 Gp5 protein_coding protein_coding MGP_129S1SvImJ_T0044093.1 MGP_129S1SvImJ_G0022738.1 mouse_genomes_project 16 30497441 30506767 + MGP_129S1SvImJ_P0044093 Tctex1d2 protein_coding protein_coding MGP_129S1SvImJ_T0044094.1 MGP_129S1SvImJ_G0022738.1 mouse_genomes_project 16 30497468 30506765 + Tctex1d2 protein_coding retained_intron MGP_129S1SvImJ_T0044705.1 MGP_129S1SvImJ_G0022888.1 mouse_genomes_project 16 55313744 55389440 + MGP_129S1SvImJ_P0044705 Impg2 protein_coding protein_coding MGP_129S1SvImJ_T0044706.1 MGP_129S1SvImJ_G0022888.1 mouse_genomes_project 16 55313763 55324426 + Impg2 protein_coding processed_transcript MGP_129S1SvImJ_T0044707.1 MGP_129S1SvImJ_G0022888.1 mouse_genomes_project 16 55313769 55392036 + MGP_129S1SvImJ_P0044707 Impg2 protein_coding protein_coding MGP_129S1SvImJ_T0044708.1 MGP_129S1SvImJ_G0022888.1 mouse_genomes_project 16 55388483 55389320 + Impg2 protein_coding processed_transcript MGP_129S1SvImJ_T0044994.1 MGP_129S1SvImJ_G0022999.1 mouse_genomes_project 16 89698538 89699065 - MGP_129S1SvImJ_P0044994 Krtap19-3 protein_coding protein_coding MGP_129S1SvImJ_T0102274.1 MGP_129S1SvImJ_G0040108.1 mouse_genomes_project 16 58218421 58219482 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0000979.1 MGP_129S1SvImJ_G0000910.1 mouse_genomes_project 16 21592937 21594708 + TEC TEC MGP_129S1SvImJ_T0101646.1 MGP_129S1SvImJ_G0039678.1 mouse_genomes_project 16 95596030 95596388 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0044088.1 MGP_129S1SvImJ_G0022735.1 mouse_genomes_project 16 30332574 30346984 + MGP_129S1SvImJ_P0044088 Rnf168 protein_coding protein_coding MGP_129S1SvImJ_T0044089.1 MGP_129S1SvImJ_G0022735.1 mouse_genomes_project 16 30332576 30361294 + MGP_129S1SvImJ_P0044089 Rnf168 protein_coding protein_coding MGP_129S1SvImJ_T0044090.1 MGP_129S1SvImJ_G0022735.1 mouse_genomes_project 16 30332576 30361822 + MGP_129S1SvImJ_P0044090 Rnf168 protein_coding protein_coding MGP_129S1SvImJ_T0044295.1 MGP_129S1SvImJ_G0022791.1 mouse_genomes_project 16 35097248 35133010 + MGP_129S1SvImJ_P0044295 Ildr1 protein_coding protein_coding MGP_129S1SvImJ_T0044296.1 MGP_129S1SvImJ_G0022791.1 mouse_genomes_project 16 35097300 35123403 + Ildr1 protein_coding retained_intron MGP_129S1SvImJ_T0044297.1 MGP_129S1SvImJ_G0022791.1 mouse_genomes_project 16 35097427 35131821 + MGP_129S1SvImJ_P0044297 Ildr1 protein_coding protein_coding MGP_129S1SvImJ_T0044298.1 MGP_129S1SvImJ_G0022791.1 mouse_genomes_project 16 35121807 35128523 + Ildr1 protein_coding retained_intron MGP_129S1SvImJ_T0044941.1 MGP_129S1SvImJ_G0022974.1 mouse_genomes_project 16 86510003 86560253 - MGP_129S1SvImJ_P0044941 Adamts5 protein_coding protein_coding MGP_129S1SvImJ_T0013208.1 MGP_129S1SvImJ_G0011297.1 mouse_genomes_project 16 59928224 59929160 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0043907.1 MGP_129S1SvImJ_G0022685.1 mouse_genomes_project 16 21198071 21202254 + MGP_129S1SvImJ_P0043907 Rtp4 protein_coding protein_coding MGP_129S1SvImJ_T0101640.1 MGP_129S1SvImJ_G0039674.1 mouse_genomes_project 16 36371970 36373112 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0044387.1 MGP_129S1SvImJ_G0022811.1 mouse_genomes_project 16 36872506 36878273 + MGP_129S1SvImJ_P0044387 protein_coding protein_coding MGP_129S1SvImJ_T0044388.1 MGP_129S1SvImJ_G0022811.1 mouse_genomes_project 16 36872511 36878251 + protein_coding processed_transcript MGP_129S1SvImJ_T0044389.1 MGP_129S1SvImJ_G0022811.1 mouse_genomes_project 16 36872537 36878254 + MGP_129S1SvImJ_P0044389 protein_coding protein_coding MGP_129S1SvImJ_T0044390.1 MGP_129S1SvImJ_G0022811.1 mouse_genomes_project 16 36872555 36878241 + protein_coding retained_intron MGP_129S1SvImJ_T0044392.1 MGP_129S1SvImJ_G0022811.1 mouse_genomes_project 16 36874756 36878233 + protein_coding retained_intron MGP_129S1SvImJ_T0044393.1 MGP_129S1SvImJ_G0022811.1 mouse_genomes_project 16 36874808 36878255 + protein_coding processed_transcript MGP_129S1SvImJ_T0101644.1 MGP_129S1SvImJ_G0039677.1 mouse_genomes_project 16 76895388 76921690 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101645.1 MGP_129S1SvImJ_G0039677.1 mouse_genomes_project 16 76897171 76897520 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0044409.1 MGP_129S1SvImJ_G0022819.1 mouse_genomes_project 16 37092797 37126795 + MGP_129S1SvImJ_P0044409 Tmem39a protein_coding protein_coding MGP_129S1SvImJ_T0044410.1 MGP_129S1SvImJ_G0022819.1 mouse_genomes_project 16 37098292 37127767 + MGP_129S1SvImJ_P0044410 Tmem39a protein_coding protein_coding MGP_129S1SvImJ_T0044411.1 MGP_129S1SvImJ_G0022819.1 mouse_genomes_project 16 37098292 37127767 + MGP_129S1SvImJ_P0044411 Tmem39a protein_coding protein_coding MGP_129S1SvImJ_T0044412.1 MGP_129S1SvImJ_G0022819.1 mouse_genomes_project 16 37098341 37121883 + MGP_129S1SvImJ_P0044412 Tmem39a protein_coding protein_coding MGP_129S1SvImJ_T0044413.1 MGP_129S1SvImJ_G0022819.1 mouse_genomes_project 16 37098366 37108609 + Tmem39a protein_coding processed_transcript MGP_129S1SvImJ_T0044414.1 MGP_129S1SvImJ_G0022819.1 mouse_genomes_project 16 37099669 37117490 + MGP_129S1SvImJ_P0044414 Tmem39a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044415.1 MGP_129S1SvImJ_G0022819.1 mouse_genomes_project 16 37110875 37121025 + Tmem39a protein_coding retained_intron MGP_129S1SvImJ_T0044416.1 MGP_129S1SvImJ_G0022819.1 mouse_genomes_project 16 37111198 37127047 + MGP_129S1SvImJ_P0044416 Tmem39a protein_coding protein_coding MGP_129S1SvImJ_T0044417.1 MGP_129S1SvImJ_G0022819.1 mouse_genomes_project 16 37117598 37126547 + MGP_129S1SvImJ_P0044417 Tmem39a protein_coding protein_coding MGP_129S1SvImJ_T0044418.1 MGP_129S1SvImJ_G0022819.1 mouse_genomes_project 16 37121015 37122516 + Tmem39a protein_coding retained_intron MGP_129S1SvImJ_T0044419.1 MGP_129S1SvImJ_G0022819.1 mouse_genomes_project 16 37121092 37122265 + Tmem39a protein_coding retained_intron MGP_129S1SvImJ_T0044420.1 MGP_129S1SvImJ_G0022819.1 mouse_genomes_project 16 37121107 37126750 + MGP_129S1SvImJ_P0044420 Tmem39a protein_coding protein_coding MGP_129S1SvImJ_T0044421.1 MGP_129S1SvImJ_G0022819.1 mouse_genomes_project 16 37122838 37126951 + Tmem39a protein_coding processed_transcript MGP_129S1SvImJ_T0044422.1 MGP_129S1SvImJ_G0022819.1 mouse_genomes_project 16 37123666 37126911 + Tmem39a protein_coding retained_intron MGP_129S1SvImJ_T0043039.1 MGP_129S1SvImJ_G0022482.1 mouse_genomes_project 16 1540444 1579691 - MGP_129S1SvImJ_P0043039 Glyr1 protein_coding protein_coding MGP_129S1SvImJ_T0043040.1 MGP_129S1SvImJ_G0022482.1 mouse_genomes_project 16 1540444 1579691 - MGP_129S1SvImJ_P0043040 Glyr1 protein_coding protein_coding MGP_129S1SvImJ_T0098326.1 MGP_129S1SvImJ_G0036411.1 mouse_genomes_project 16 58280307 58358013 - pseudogene pseudogene MGP_129S1SvImJ_T0045047.1 MGP_129S1SvImJ_G0023029.1 mouse_genomes_project 16 91719323 91780182 - MGP_129S1SvImJ_P0045047 Urb1 protein_coding protein_coding MGP_129S1SvImJ_T0045048.1 MGP_129S1SvImJ_G0023029.1 mouse_genomes_project 16 91735346 91741117 - Urb1 protein_coding retained_intron MGP_129S1SvImJ_T0045049.1 MGP_129S1SvImJ_G0023029.1 mouse_genomes_project 16 91751478 91780182 - Urb1 protein_coding retained_intron MGP_129S1SvImJ_T0045050.1 MGP_129S1SvImJ_G0023029.1 mouse_genomes_project 16 91769851 91780171 - Urb1 protein_coding retained_intron MGP_129S1SvImJ_T0045051.1 MGP_129S1SvImJ_G0023029.1 mouse_genomes_project 16 91774654 91780203 - Urb1 protein_coding retained_intron MGP_129S1SvImJ_T0017551.1 MGP_129S1SvImJ_G0015325.1 mouse_genomes_project 16 88218356 88226964 + B130034C11Rik processed_transcript retained_intron MGP_129S1SvImJ_T0017552.1 MGP_129S1SvImJ_G0015325.1 mouse_genomes_project 16 88218430 88227169 + B130034C11Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0043261.1 MGP_129S1SvImJ_G0022540.1 mouse_genomes_project 16 11009358 11137472 + MGP_129S1SvImJ_P0043261 2900011O08Rik protein_coding protein_coding MGP_129S1SvImJ_T0010151.1 MGP_129S1SvImJ_G0008267.1 mouse_genomes_project 16 31222293 31222366 + Gm22231 miRNA miRNA MGP_129S1SvImJ_T0044092.1 MGP_129S1SvImJ_G0022737.1 mouse_genomes_project 16 30467717 30476975 + MGP_129S1SvImJ_P0044092 Tm4sf19 protein_coding protein_coding MGP_129S1SvImJ_T0044493.1 MGP_129S1SvImJ_G0022835.1 mouse_genomes_project 16 42870391 42897828 + MGP_129S1SvImJ_P0044493 Naa50 protein_coding protein_coding MGP_129S1SvImJ_T0044494.1 MGP_129S1SvImJ_G0022835.1 mouse_genomes_project 16 42870414 42898720 + MGP_129S1SvImJ_P0044494 Naa50 protein_coding protein_coding MGP_129S1SvImJ_T0044495.1 MGP_129S1SvImJ_G0022835.1 mouse_genomes_project 16 42870447 42897826 + MGP_129S1SvImJ_P0044495 Naa50 protein_coding protein_coding MGP_129S1SvImJ_T0044496.1 MGP_129S1SvImJ_G0022835.1 mouse_genomes_project 16 42870453 42896520 + MGP_129S1SvImJ_P0044496 Naa50 protein_coding protein_coding MGP_129S1SvImJ_T0010157.1 MGP_129S1SvImJ_G0008273.1 mouse_genomes_project 16 40982939 40983047 - Mir6540 miRNA miRNA MGP_129S1SvImJ_T0043668.1 MGP_129S1SvImJ_G0022633.1 mouse_genomes_project 16 17037665 17049463 + MGP_129S1SvImJ_P0043668 B3gnt5 protein_coding protein_coding MGP_129S1SvImJ_T0043669.1 MGP_129S1SvImJ_G0022633.1 mouse_genomes_project 16 17037691 17049983 + MGP_129S1SvImJ_P0043669 B3gnt5 protein_coding protein_coding MGP_129S1SvImJ_T0043670.1 MGP_129S1SvImJ_G0022633.1 mouse_genomes_project 16 17037691 17049693 + MGP_129S1SvImJ_P0043670 B3gnt5 protein_coding protein_coding MGP_129S1SvImJ_T0043671.1 MGP_129S1SvImJ_G0022633.1 mouse_genomes_project 16 17037856 17042852 + B3gnt5 protein_coding processed_transcript MGP_129S1SvImJ_T0043672.1 MGP_129S1SvImJ_G0022633.1 mouse_genomes_project 16 17038043 17046068 + B3gnt5 protein_coding retained_intron MGP_129S1SvImJ_T0043673.1 MGP_129S1SvImJ_G0022633.1 mouse_genomes_project 16 17038044 17041593 + B3gnt5 protein_coding retained_intron MGP_129S1SvImJ_T0043674.1 MGP_129S1SvImJ_G0022633.1 mouse_genomes_project 16 17038511 17047854 + MGP_129S1SvImJ_P0043674 B3gnt5 protein_coding protein_coding MGP_129S1SvImJ_T0043405.1 MGP_129S1SvImJ_G0022574.1 mouse_genomes_project 16 14341235 14347022 + MGP_129S1SvImJ_P0043405 Rimbp3 protein_coding protein_coding MGP_129S1SvImJ_T0045191.1 MGP_129S1SvImJ_G0023057.1 mouse_genomes_project 16 93475559 93549815 - MGP_129S1SvImJ_P0045191 Rcan1 protein_coding protein_coding MGP_129S1SvImJ_T0045192.1 MGP_129S1SvImJ_G0023057.1 mouse_genomes_project 16 93475559 93483688 - MGP_129S1SvImJ_P0045192 Rcan1 protein_coding protein_coding MGP_129S1SvImJ_T0044797.1 MGP_129S1SvImJ_G0022923.1 mouse_genomes_project 16 58459623 58460579 - MGP_129S1SvImJ_P0044797 Olfr198 protein_coding protein_coding MGP_129S1SvImJ_T0044623.1 MGP_129S1SvImJ_G0022867.1 mouse_genomes_project 16 47696372 47698410 + MGP_129S1SvImJ_P0044623 Retnlb protein_coding protein_coding MGP_129S1SvImJ_T0045370.1 MGP_129S1SvImJ_G0023090.1 mouse_genomes_project 16 98874925 98894553 - MGP_129S1SvImJ_P0045370 Mx1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045371.1 MGP_129S1SvImJ_G0023090.1 mouse_genomes_project 16 98874927 98894551 - MGP_129S1SvImJ_P0045371 Mx1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045372.1 MGP_129S1SvImJ_G0023090.1 mouse_genomes_project 16 98874927 98894552 - MGP_129S1SvImJ_P0045372 Mx1 protein_coding protein_coding MGP_129S1SvImJ_T0045373.1 MGP_129S1SvImJ_G0023090.1 mouse_genomes_project 16 98874927 98894552 - MGP_129S1SvImJ_P0045373 Mx1 protein_coding protein_coding MGP_129S1SvImJ_T0045374.1 MGP_129S1SvImJ_G0023090.1 mouse_genomes_project 16 98884763 98894551 - MGP_129S1SvImJ_P0045374 Mx1 protein_coding protein_coding MGP_129S1SvImJ_T0044464.1 MGP_129S1SvImJ_G0022829.1 mouse_genomes_project 16 42468722 42538201 + MGP_129S1SvImJ_P0044464 Drd3 protein_coding protein_coding MGP_129S1SvImJ_T0100789.1 MGP_129S1SvImJ_G0038856.1 mouse_genomes_project 16 42602434 42602567 - Gm25989 snoRNA snoRNA MGP_129S1SvImJ_T0044230.1 MGP_129S1SvImJ_G0022766.1 mouse_genomes_project 16 33449060 33610976 + MGP_129S1SvImJ_P0044230 Adcy5 protein_coding protein_coding MGP_129S1SvImJ_T0044277.1 MGP_129S1SvImJ_G0022781.1 mouse_genomes_project 16 34529984 34537218 + MGP_129S1SvImJ_P0044277 protein_coding protein_coding MGP_129S1SvImJ_T0044197.1 MGP_129S1SvImJ_G0022759.1 mouse_genomes_project 16 32067243 32193054 + MGP_129S1SvImJ_P0044197 Itgb5 protein_coding protein_coding MGP_129S1SvImJ_T0044198.1 MGP_129S1SvImJ_G0022759.1 mouse_genomes_project 16 32067255 32193061 + MGP_129S1SvImJ_P0044198 Itgb5 protein_coding protein_coding MGP_129S1SvImJ_T0044199.1 MGP_129S1SvImJ_G0022759.1 mouse_genomes_project 16 32123458 32154351 + Itgb5 protein_coding processed_transcript MGP_129S1SvImJ_T0044200.1 MGP_129S1SvImJ_G0022759.1 mouse_genomes_project 16 32131889 32141964 + Itgb5 protein_coding processed_transcript MGP_129S1SvImJ_T0044201.1 MGP_129S1SvImJ_G0022759.1 mouse_genomes_project 16 32166133 32188056 + Itgb5 protein_coding processed_transcript MGP_129S1SvImJ_T0044404.1 MGP_129S1SvImJ_G0022818.1 mouse_genomes_project 16 37056682 37080645 - MGP_129S1SvImJ_P0044404 Poglut1 protein_coding protein_coding MGP_129S1SvImJ_T0044405.1 MGP_129S1SvImJ_G0022818.1 mouse_genomes_project 16 37056685 37080609 - Poglut1 protein_coding retained_intron MGP_129S1SvImJ_T0044406.1 MGP_129S1SvImJ_G0022818.1 mouse_genomes_project 16 37061016 37062803 - Poglut1 protein_coding retained_intron MGP_129S1SvImJ_T0044407.1 MGP_129S1SvImJ_G0022818.1 mouse_genomes_project 16 37064403 37068270 - Poglut1 protein_coding retained_intron MGP_129S1SvImJ_T0044408.1 MGP_129S1SvImJ_G0022818.1 mouse_genomes_project 16 37078405 37080609 - Poglut1 protein_coding retained_intron MGP_129S1SvImJ_T0006879.1 MGP_129S1SvImJ_G0005674.1 mouse_genomes_project 16 76042572 76053441 + Gm15555 lincRNA lincRNA MGP_129S1SvImJ_T0000040.1 MGP_129S1SvImJ_G0000033.1 mouse_genomes_project 16 16338670 16338708 - MGP_129S1SvImJ_P0000040 Iglj3p IG_J_gene IG_J_gene MGP_129S1SvImJ_T0003699.1 MGP_129S1SvImJ_G0003345.1 mouse_genomes_project 16 35302026 35319910 - 4930565N06Rik antisense antisense MGP_129S1SvImJ_T0013143.1 MGP_129S1SvImJ_G0011232.1 mouse_genomes_project 16 7628756 7629489 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098838.1 MGP_129S1SvImJ_G0036918.1 mouse_genomes_project 16 2549714 2573495 + 1700123O21Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0010169.1 MGP_129S1SvImJ_G0008285.1 mouse_genomes_project 16 64951080 64951190 + Gm23659 miRNA miRNA MGP_129S1SvImJ_T0013152.1 MGP_129S1SvImJ_G0011241.1 mouse_genomes_project 16 12310158 12310628 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099496.1 MGP_129S1SvImJ_G0037563.1 mouse_genomes_project 16 14338892 14338999 - Gm22129 snRNA snRNA MGP_129S1SvImJ_T0044677.1 MGP_129S1SvImJ_G0022883.1 mouse_genomes_project 16 55060706 55067042 + MGP_129S1SvImJ_P0044677 Rpl24 protein_coding protein_coding MGP_129S1SvImJ_T0044678.1 MGP_129S1SvImJ_G0022883.1 mouse_genomes_project 16 55060852 55067042 + Rpl24 protein_coding processed_transcript MGP_129S1SvImJ_T0044679.1 MGP_129S1SvImJ_G0022883.1 mouse_genomes_project 16 55060978 55065240 + Rpl24 protein_coding retained_intron MGP_129S1SvImJ_T0044680.1 MGP_129S1SvImJ_G0022883.1 mouse_genomes_project 16 55065460 55067042 + Rpl24 protein_coding retained_intron MGP_129S1SvImJ_T0043020.1 MGP_129S1SvImJ_G0022479.1 mouse_genomes_project 16 1510105 1521039 - MGP_129S1SvImJ_P0043020 Sept12 protein_coding protein_coding MGP_129S1SvImJ_T0045210.1 MGP_129S1SvImJ_G0023061.1 mouse_genomes_project 16 94779010 94781679 + MGP_129S1SvImJ_P0045210 Cbr1 protein_coding protein_coding MGP_129S1SvImJ_T0099531.1 MGP_129S1SvImJ_G0037598.1 mouse_genomes_project 16 65813854 65813961 + Gm22448 snRNA snRNA MGP_129S1SvImJ_T0043839.1 MGP_129S1SvImJ_G0022668.1 mouse_genomes_project 16 19727592 19750600 - MGP_129S1SvImJ_P0043839 Tra2b protein_coding protein_coding MGP_129S1SvImJ_T0043840.1 MGP_129S1SvImJ_G0022668.1 mouse_genomes_project 16 19729687 19750424 - MGP_129S1SvImJ_P0043840 Tra2b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043841.1 MGP_129S1SvImJ_G0022668.1 mouse_genomes_project 16 19729853 19737233 - Tra2b protein_coding retained_intron MGP_129S1SvImJ_T0043842.1 MGP_129S1SvImJ_G0022668.1 mouse_genomes_project 16 19739100 19744199 - Tra2b protein_coding processed_transcript MGP_129S1SvImJ_T0043843.1 MGP_129S1SvImJ_G0022668.1 mouse_genomes_project 16 19742640 19750513 - Tra2b protein_coding retained_intron MGP_129S1SvImJ_T0043290.1 MGP_129S1SvImJ_G0022548.1 mouse_genomes_project 16 11800650 11804194 + MGP_129S1SvImJ_P0043290 Snai2 protein_coding protein_coding MGP_129S1SvImJ_T0003667.1 MGP_129S1SvImJ_G0003319.1 mouse_genomes_project 16 372373 377337 - antisense antisense MGP_129S1SvImJ_T0043435.1 MGP_129S1SvImJ_G0022580.1 mouse_genomes_project 16 14601525 14639566 + MGP_129S1SvImJ_P0043435 Crkl protein_coding protein_coding MGP_129S1SvImJ_T0043676.1 MGP_129S1SvImJ_G0022635.1 mouse_genomes_project 16 17232600 17271314 - MGP_129S1SvImJ_P0043676 Klhl6 protein_coding protein_coding MGP_129S1SvImJ_T0043677.1 MGP_129S1SvImJ_G0022635.1 mouse_genomes_project 16 17244132 17253898 - Klhl6 protein_coding retained_intron MGP_129S1SvImJ_T0043678.1 MGP_129S1SvImJ_G0022635.1 mouse_genomes_project 16 17244152 17271284 - MGP_129S1SvImJ_P0043678 Klhl6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043679.1 MGP_129S1SvImJ_G0022635.1 mouse_genomes_project 16 17253622 17271207 - MGP_129S1SvImJ_P0043679 Klhl6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044709.1 MGP_129S1SvImJ_G0022889.1 mouse_genomes_project 16 55588768 55823659 + MGP_129S1SvImJ_P0044709 Abi3bp protein_coding protein_coding MGP_129S1SvImJ_T0044710.1 MGP_129S1SvImJ_G0022889.1 mouse_genomes_project 16 55588768 55823659 + MGP_129S1SvImJ_P0044710 Abi3bp protein_coding protein_coding MGP_129S1SvImJ_T0044711.1 MGP_129S1SvImJ_G0022889.1 mouse_genomes_project 16 55588768 55823659 + MGP_129S1SvImJ_P0044711 Abi3bp protein_coding protein_coding MGP_129S1SvImJ_T0044712.1 MGP_129S1SvImJ_G0022889.1 mouse_genomes_project 16 55588768 55823659 + MGP_129S1SvImJ_P0044712 Abi3bp protein_coding protein_coding MGP_129S1SvImJ_T0044713.1 MGP_129S1SvImJ_G0022889.1 mouse_genomes_project 16 55588836 55823669 + MGP_129S1SvImJ_P0044713 Abi3bp protein_coding unknown_likely_coding MGP_129S1SvImJ_T0100783.1 MGP_129S1SvImJ_G0038850.1 mouse_genomes_project 16 33689402 33689605 + Gm25079 snoRNA snoRNA MGP_129S1SvImJ_T0044983.1 MGP_129S1SvImJ_G0022990.1 mouse_genomes_project 16 89545289 89546037 + MGP_129S1SvImJ_P0044983 Krtap13-1 protein_coding protein_coding MGP_129S1SvImJ_T0001001.1 MGP_129S1SvImJ_G0000931.1 mouse_genomes_project 16 92254698 92255499 + TEC TEC MGP_129S1SvImJ_T0045363.1 MGP_129S1SvImJ_G0023086.1 mouse_genomes_project 16 97802649 97825219 - MGP_129S1SvImJ_P0045363 Itgb2l protein_coding protein_coding MGP_129S1SvImJ_T0045364.1 MGP_129S1SvImJ_G0023086.1 mouse_genomes_project 16 97802653 97825214 - MGP_129S1SvImJ_P0045364 Itgb2l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045365.1 MGP_129S1SvImJ_G0023086.1 mouse_genomes_project 16 97802737 97825212 - MGP_129S1SvImJ_P0045365 Itgb2l protein_coding protein_coding MGP_129S1SvImJ_T0045366.1 MGP_129S1SvImJ_G0023086.1 mouse_genomes_project 16 97807091 97809506 - Itgb2l protein_coding processed_transcript MGP_129S1SvImJ_T0043110.1 MGP_129S1SvImJ_G0022504.1 mouse_genomes_project 16 7066010 7101451 - MGP_129S1SvImJ_P0043110 Emp2 protein_coding protein_coding MGP_129S1SvImJ_T0010162.1 MGP_129S1SvImJ_G0008278.1 mouse_genomes_project 16 49666322 49666436 + Mir6363 miRNA miRNA MGP_129S1SvImJ_T0044042.1 MGP_129S1SvImJ_G0022722.1 mouse_genomes_project 16 29874381 29895915 + MGP_129S1SvImJ_P0044042 Mfi2 protein_coding protein_coding MGP_129S1SvImJ_T0013199.1 MGP_129S1SvImJ_G0011288.1 mouse_genomes_project 16 44315810 44317166 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0000992.1 MGP_129S1SvImJ_G0000922.1 mouse_genomes_project 16 77596171 77600248 + TEC TEC MGP_129S1SvImJ_T0003678.1 MGP_129S1SvImJ_G0003328.1 mouse_genomes_project 16 14207978 14211514 + Gm15585 antisense antisense MGP_129S1SvImJ_T0000987.1 MGP_129S1SvImJ_G0000918.1 mouse_genomes_project 16 77509439 77512545 + TEC TEC MGP_129S1SvImJ_T0000988.1 MGP_129S1SvImJ_G0000918.1 mouse_genomes_project 16 77510256 77510618 + TEC pseudogene MGP_129S1SvImJ_T0044836.1 MGP_129S1SvImJ_G0022939.1 mouse_genomes_project 16 63959580 63960916 - MGP_129S1SvImJ_P0044836 Csnka2ip protein_coding protein_coding MGP_129S1SvImJ_T0043897.1 MGP_129S1SvImJ_G0022681.1 mouse_genomes_project 16 20794024 20798702 - MGP_129S1SvImJ_P0043897 BC106179 protein_coding protein_coding MGP_129S1SvImJ_T0100782.1 MGP_129S1SvImJ_G0038849.1 mouse_genomes_project 16 30296526 30296670 - Gm25848 snoRNA snoRNA MGP_129S1SvImJ_T0006840.1 MGP_129S1SvImJ_G0005643.1 mouse_genomes_project 16 14155024 14156616 + 1700056N10Rik lincRNA lincRNA MGP_129S1SvImJ_T0003718.1 MGP_129S1SvImJ_G0003360.1 mouse_genomes_project 16 93705196 93712401 + Gm26626 antisense antisense MGP_129S1SvImJ_T0044231.1 MGP_129S1SvImJ_G0022767.1 mouse_genomes_project 16 33616373 33669225 - MGP_129S1SvImJ_P0044231 Sec22a protein_coding protein_coding MGP_129S1SvImJ_T0044232.1 MGP_129S1SvImJ_G0022767.1 mouse_genomes_project 16 33619312 33653048 - Sec22a protein_coding processed_transcript MGP_129S1SvImJ_T0044233.1 MGP_129S1SvImJ_G0022767.1 mouse_genomes_project 16 33654218 33669122 - Sec22a protein_coding retained_intron MGP_129S1SvImJ_T0044234.1 MGP_129S1SvImJ_G0022767.1 mouse_genomes_project 16 33665979 33669159 - Sec22a protein_coding retained_intron MGP_129S1SvImJ_T0044235.1 MGP_129S1SvImJ_G0022767.1 mouse_genomes_project 16 33666351 33669154 - Sec22a protein_coding processed_transcript MGP_129S1SvImJ_T0044849.1 MGP_129S1SvImJ_G0022946.1 mouse_genomes_project 16 65362839 65410599 + MGP_129S1SvImJ_P0044849 Vgll3 protein_coding protein_coding MGP_129S1SvImJ_T0044850.1 MGP_129S1SvImJ_G0022946.1 mouse_genomes_project 16 65362839 65408257 + MGP_129S1SvImJ_P0044850 Vgll3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0001002.1 MGP_129S1SvImJ_G0000932.1 mouse_genomes_project 16 97097464 97098319 + TEC TEC MGP_129S1SvImJ_T0045193.1 MGP_129S1SvImJ_G0023058.1 mouse_genomes_project 16 93571670 93619181 + MGP_129S1SvImJ_P0045193 Clic6 protein_coding protein_coding MGP_129S1SvImJ_T0045194.1 MGP_129S1SvImJ_G0023058.1 mouse_genomes_project 16 93584067 93633637 + MGP_129S1SvImJ_P0045194 Clic6 protein_coding protein_coding MGP_129S1SvImJ_T0011827.1 MGP_129S1SvImJ_G0009937.1 mouse_genomes_project 16 98975320 99001366 + MGP_129S1SvImJ_P0011827 polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0011828.1 MGP_129S1SvImJ_G0009937.1 mouse_genomes_project 16 98976092 99001926 + MGP_129S1SvImJ_P0011828 polymorphic_pseudogene protein_coding MGP_129S1SvImJ_T0011829.1 MGP_129S1SvImJ_G0009937.1 mouse_genomes_project 16 98991511 98993095 + polymorphic_pseudogene processed_transcript MGP_129S1SvImJ_T0011830.1 MGP_129S1SvImJ_G0009937.1 mouse_genomes_project 16 98999438 99001545 + polymorphic_pseudogene retained_intron MGP_129S1SvImJ_T0043129.1 MGP_129S1SvImJ_G0022510.1 mouse_genomes_project 16 7353499 7567101 + MGP_129S1SvImJ_P0043129 Clec16a protein_coding protein_coding MGP_129S1SvImJ_T0043130.1 MGP_129S1SvImJ_G0022510.1 mouse_genomes_project 16 7353499 7567101 + MGP_129S1SvImJ_P0043130 Clec16a protein_coding protein_coding MGP_129S1SvImJ_T0043131.1 MGP_129S1SvImJ_G0022510.1 mouse_genomes_project 16 7353524 7567101 + MGP_129S1SvImJ_P0043131 Clec16a protein_coding protein_coding MGP_129S1SvImJ_T0043132.1 MGP_129S1SvImJ_G0022510.1 mouse_genomes_project 16 7353537 7373126 + Clec16a protein_coding processed_transcript MGP_129S1SvImJ_T0043133.1 MGP_129S1SvImJ_G0022510.1 mouse_genomes_project 16 7353558 7541179 + MGP_129S1SvImJ_P0043133 Clec16a protein_coding protein_coding MGP_129S1SvImJ_T0043134.1 MGP_129S1SvImJ_G0022510.1 mouse_genomes_project 16 7353569 7512427 + MGP_129S1SvImJ_P0043134 Clec16a protein_coding protein_coding MGP_129S1SvImJ_T0043135.1 MGP_129S1SvImJ_G0022510.1 mouse_genomes_project 16 7353569 7367899 + MGP_129S1SvImJ_P0043135 Clec16a protein_coding protein_coding MGP_129S1SvImJ_T0043136.1 MGP_129S1SvImJ_G0022510.1 mouse_genomes_project 16 7353569 7562025 + MGP_129S1SvImJ_P0043136 Clec16a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043137.1 MGP_129S1SvImJ_G0022510.1 mouse_genomes_project 16 7411889 7562666 + MGP_129S1SvImJ_P0043137 Clec16a protein_coding protein_coding MGP_129S1SvImJ_T0043138.1 MGP_129S1SvImJ_G0022510.1 mouse_genomes_project 16 7422023 7444630 + Clec16a protein_coding processed_transcript MGP_129S1SvImJ_T0043139.1 MGP_129S1SvImJ_G0022510.1 mouse_genomes_project 16 7443888 7453436 + Clec16a protein_coding processed_transcript MGP_129S1SvImJ_T0044181.1 MGP_129S1SvImJ_G0022754.1 mouse_genomes_project 16 31431042 31485801 + MGP_129S1SvImJ_P0044181 Snx4 protein_coding protein_coding MGP_129S1SvImJ_T0044068.1 MGP_129S1SvImJ_G0022729.1 mouse_genomes_project 16 30133183 30142456 + MGP_129S1SvImJ_P0044068 Cep19 protein_coding protein_coding MGP_129S1SvImJ_T0044069.1 MGP_129S1SvImJ_G0022729.1 mouse_genomes_project 16 30133335 30142438 + MGP_129S1SvImJ_P0044069 Cep19 protein_coding protein_coding MGP_129S1SvImJ_T0044070.1 MGP_129S1SvImJ_G0022729.1 mouse_genomes_project 16 30138264 30142442 + MGP_129S1SvImJ_P0044070 Cep19 protein_coding protein_coding MGP_129S1SvImJ_T0044384.1 MGP_129S1SvImJ_G0022810.1 mouse_genomes_project 16 36819815 36867424 - MGP_129S1SvImJ_P0044384 Maats1 protein_coding protein_coding MGP_129S1SvImJ_T0044385.1 MGP_129S1SvImJ_G0022810.1 mouse_genomes_project 16 36846549 36867391 - MGP_129S1SvImJ_P0044385 Maats1 protein_coding protein_coding MGP_129S1SvImJ_T0044386.1 MGP_129S1SvImJ_G0022810.1 mouse_genomes_project 16 36857812 36867722 - Maats1 protein_coding processed_transcript MGP_129S1SvImJ_T0013214.1 MGP_129S1SvImJ_G0011303.1 mouse_genomes_project 16 74954008 74955016 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013133.1 MGP_129S1SvImJ_G0011222.1 mouse_genomes_project 16 372190 372756 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010146.1 MGP_129S1SvImJ_G0008262.1 mouse_genomes_project 16 20671366 20671472 + miRNA miRNA MGP_129S1SvImJ_T0043725.1 MGP_129S1SvImJ_G0022645.1 mouse_genomes_project 16 17887080 17899907 + MGP_129S1SvImJ_P0043725 Abcf3 protein_coding protein_coding MGP_129S1SvImJ_T0043726.1 MGP_129S1SvImJ_G0022645.1 mouse_genomes_project 16 17888171 17890148 + Abcf3 protein_coding retained_intron MGP_129S1SvImJ_T0043727.1 MGP_129S1SvImJ_G0022645.1 mouse_genomes_project 16 17889080 17897352 + Abcf3 protein_coding retained_intron MGP_129S1SvImJ_T0043728.1 MGP_129S1SvImJ_G0022645.1 mouse_genomes_project 16 17897822 17898798 + Abcf3 protein_coding retained_intron MGP_129S1SvImJ_T0043729.1 MGP_129S1SvImJ_G0022645.1 mouse_genomes_project 16 17898135 17899346 + Abcf3 protein_coding retained_intron MGP_129S1SvImJ_T0044340.1 MGP_129S1SvImJ_G0022798.1 mouse_genomes_project 16 35429923 35523570 + MGP_129S1SvImJ_P0044340 Polq protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044341.1 MGP_129S1SvImJ_G0022798.1 mouse_genomes_project 16 35429923 35523975 + MGP_129S1SvImJ_P0044341 Polq protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044342.1 MGP_129S1SvImJ_G0022798.1 mouse_genomes_project 16 35429923 35523570 + MGP_129S1SvImJ_P0044342 Polq protein_coding protein_coding MGP_129S1SvImJ_T0044343.1 MGP_129S1SvImJ_G0022798.1 mouse_genomes_project 16 35429923 35523995 + MGP_129S1SvImJ_P0044343 Polq protein_coding protein_coding MGP_129S1SvImJ_T0044344.1 MGP_129S1SvImJ_G0022798.1 mouse_genomes_project 16 35429952 35438352 + Polq protein_coding retained_intron MGP_129S1SvImJ_T0044345.1 MGP_129S1SvImJ_G0022798.1 mouse_genomes_project 16 35462332 35487356 + Polq protein_coding retained_intron MGP_129S1SvImJ_T0044346.1 MGP_129S1SvImJ_G0022798.1 mouse_genomes_project 16 35514494 35523995 + Polq protein_coding retained_intron MGP_129S1SvImJ_T0044504.1 MGP_129S1SvImJ_G0022838.1 mouse_genomes_project 16 43099780 43140917 + MGP_129S1SvImJ_P0044504 Spice1 protein_coding protein_coding MGP_129S1SvImJ_T0044505.1 MGP_129S1SvImJ_G0022838.1 mouse_genomes_project 16 43100073 43123178 + Spice1 protein_coding processed_transcript MGP_129S1SvImJ_T0044506.1 MGP_129S1SvImJ_G0022838.1 mouse_genomes_project 16 43100705 43120158 + Spice1 protein_coding processed_transcript MGP_129S1SvImJ_T0044507.1 MGP_129S1SvImJ_G0022838.1 mouse_genomes_project 16 43120060 43122816 + Spice1 protein_coding retained_intron MGP_129S1SvImJ_T0044508.1 MGP_129S1SvImJ_G0022838.1 mouse_genomes_project 16 43120130 43123183 + Spice1 protein_coding retained_intron MGP_129S1SvImJ_T0044509.1 MGP_129S1SvImJ_G0022838.1 mouse_genomes_project 16 43122433 43138103 + Spice1 protein_coding retained_intron MGP_129S1SvImJ_T0044510.1 MGP_129S1SvImJ_G0022838.1 mouse_genomes_project 16 43122875 43126047 + Spice1 protein_coding processed_transcript MGP_129S1SvImJ_T0044511.1 MGP_129S1SvImJ_G0022838.1 mouse_genomes_project 16 43137780 43139529 + Spice1 protein_coding retained_intron MGP_129S1SvImJ_T0044946.1 MGP_129S1SvImJ_G0022977.1 mouse_genomes_project 16 88149056 88156224 - MGP_129S1SvImJ_P0044946 Rwdd2b protein_coding protein_coding MGP_129S1SvImJ_T0044947.1 MGP_129S1SvImJ_G0022977.1 mouse_genomes_project 16 88152345 88156224 - Rwdd2b protein_coding processed_transcript MGP_129S1SvImJ_T0043287.1 MGP_129S1SvImJ_G0022547.1 mouse_genomes_project 16 11630326 11687518 + MGP_129S1SvImJ_P0043287 A630010A05Rik protein_coding protein_coding MGP_129S1SvImJ_T0043288.1 MGP_129S1SvImJ_G0022547.1 mouse_genomes_project 16 11643327 11687540 + MGP_129S1SvImJ_P0043288 A630010A05Rik protein_coding protein_coding MGP_129S1SvImJ_T0043289.1 MGP_129S1SvImJ_G0022547.1 mouse_genomes_project 16 11652524 11687526 + MGP_129S1SvImJ_P0043289 A630010A05Rik protein_coding protein_coding MGP_129S1SvImJ_T0099501.1 MGP_129S1SvImJ_G0037568.1 mouse_genomes_project 16 19209900 19210006 + Gm24898 snRNA snRNA MGP_129S1SvImJ_T0044646.1 MGP_129S1SvImJ_G0022874.1 mouse_genomes_project 16 48739546 48806539 + MGP_129S1SvImJ_P0044646 Cd47 protein_coding protein_coding MGP_129S1SvImJ_T0044647.1 MGP_129S1SvImJ_G0022874.1 mouse_genomes_project 16 48739715 48806548 + MGP_129S1SvImJ_P0044647 Cd47 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0044648.1 MGP_129S1SvImJ_G0022874.1 mouse_genomes_project 16 48756273 48801900 + MGP_129S1SvImJ_P0044648 Cd47 protein_coding protein_coding MGP_129S1SvImJ_T0043890.1 MGP_129S1SvImJ_G0022679.1 mouse_genomes_project 16 20675606 20689407 - MGP_129S1SvImJ_P0043890 Rfc4 protein_coding protein_coding MGP_129S1SvImJ_T0043891.1 MGP_129S1SvImJ_G0022679.1 mouse_genomes_project 16 20675614 20689387 - MGP_129S1SvImJ_P0043891 Rfc4 protein_coding protein_coding MGP_129S1SvImJ_T0043892.1 MGP_129S1SvImJ_G0022679.1 mouse_genomes_project 16 20675658 20676408 - Rfc4 protein_coding retained_intron MGP_129S1SvImJ_T0043893.1 MGP_129S1SvImJ_G0022679.1 mouse_genomes_project 16 20676370 20689361 - MGP_129S1SvImJ_P0043893 Rfc4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043894.1 MGP_129S1SvImJ_G0022679.1 mouse_genomes_project 16 20682638 20689398 - MGP_129S1SvImJ_P0043894 Rfc4 protein_coding protein_coding MGP_129S1SvImJ_T0043141.1 MGP_129S1SvImJ_G0022512.1 mouse_genomes_project 16 7615296 7616016 - MGP_129S1SvImJ_P0043141 Tnp2 protein_coding protein_coding MGP_129S1SvImJ_T0044383.1 MGP_129S1SvImJ_G0022809.1 mouse_genomes_project 16 36764483 36815008 - MGP_129S1SvImJ_P0044383 Nr1i2 protein_coding protein_coding MGP_129S1SvImJ_T0043142.1 MGP_129S1SvImJ_G0022513.1 mouse_genomes_project 16 7617864 7618277 - MGP_129S1SvImJ_P0043142 Prm3 protein_coding protein_coding MGP_129S1SvImJ_T0013141.1 MGP_129S1SvImJ_G0011230.1 mouse_genomes_project 16 6798366 6799132 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0043505.1 MGP_129S1SvImJ_G0022589.1 mouse_genomes_project 16 14821900 14896132 - MGP_129S1SvImJ_P0043505 Med15 protein_coding protein_coding MGP_129S1SvImJ_T0043506.1 MGP_129S1SvImJ_G0022589.1 mouse_genomes_project 16 14821900 14896132 - MGP_129S1SvImJ_P0043506 Med15 protein_coding protein_coding MGP_129S1SvImJ_T0045368.1 MGP_129S1SvImJ_G0023088.1 mouse_genomes_project 16 97981863 98600641 - MGP_129S1SvImJ_P0045368 Dscam protein_coding protein_coding MGP_129S1SvImJ_T0044336.1 MGP_129S1SvImJ_G0022797.1 mouse_genomes_project 16 35386963 35407637 - MGP_129S1SvImJ_P0044336 Fbxo40 protein_coding protein_coding MGP_129S1SvImJ_T0044337.1 MGP_129S1SvImJ_G0022797.1 mouse_genomes_project 16 35389434 35396393 - Fbxo40 protein_coding processed_transcript MGP_129S1SvImJ_T0044338.1 MGP_129S1SvImJ_G0022797.1 mouse_genomes_project 16 35389543 35394269 - Fbxo40 protein_coding retained_intron MGP_129S1SvImJ_T0044339.1 MGP_129S1SvImJ_G0022797.1 mouse_genomes_project 16 35389576 35396753 - MGP_129S1SvImJ_P0044339 Fbxo40 protein_coding protein_coding MGP_129S1SvImJ_T0013225.1 MGP_129S1SvImJ_G0011314.1 mouse_genomes_project 16 92558607 92559486 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098515.1 MGP_129S1SvImJ_G0036600.1 mouse_genomes_project 16 5565074 5565167 - Gm22224 rRNA rRNA MGP_129S1SvImJ_T0043898.1 MGP_129S1SvImJ_G0022682.1 mouse_genomes_project 16 20798073 20942131 + MGP_129S1SvImJ_P0043898 St6gal1 protein_coding protein_coding MGP_129S1SvImJ_T0043899.1 MGP_129S1SvImJ_G0022682.1 mouse_genomes_project 16 20799354 20900298 + St6gal1 protein_coding processed_transcript MGP_129S1SvImJ_T0043900.1 MGP_129S1SvImJ_G0022682.1 mouse_genomes_project 16 20799354 20942133 + MGP_129S1SvImJ_P0043900 St6gal1 protein_coding protein_coding MGP_129S1SvImJ_T0043901.1 MGP_129S1SvImJ_G0022682.1 mouse_genomes_project 16 20848797 20900406 + MGP_129S1SvImJ_P0043901 St6gal1 protein_coding protein_coding MGP_129S1SvImJ_T0043902.1 MGP_129S1SvImJ_G0022682.1 mouse_genomes_project 16 20868186 20940378 + MGP_129S1SvImJ_P0043902 St6gal1 protein_coding protein_coding MGP_129S1SvImJ_T0043903.1 MGP_129S1SvImJ_G0022682.1 mouse_genomes_project 16 20940098 20942131 + St6gal1 protein_coding processed_transcript MGP_129S1SvImJ_T0044938.1 MGP_129S1SvImJ_G0022973.1 mouse_genomes_project 16 86441015 86450287 - MGP_129S1SvImJ_P0044938 Adamts1 protein_coding protein_coding MGP_129S1SvImJ_T0044939.1 MGP_129S1SvImJ_G0022973.1 mouse_genomes_project 16 86442658 86448653 - MGP_129S1SvImJ_P0044939 Adamts1 protein_coding protein_coding MGP_129S1SvImJ_T0044940.1 MGP_129S1SvImJ_G0022973.1 mouse_genomes_project 16 86445413 86446821 - Adamts1 protein_coding processed_transcript MGP_129S1SvImJ_T0044278.1 MGP_129S1SvImJ_G0022782.1 mouse_genomes_project 16 34576837 34580693 + MGP_129S1SvImJ_P0044278 Gm5483 protein_coding protein_coding MGP_129S1SvImJ_T0043597.1 MGP_129S1SvImJ_G0022611.1 mouse_genomes_project 16 15651957 15710037 + MGP_129S1SvImJ_P0043597 Txnrd2 protein_coding protein_coding MGP_129S1SvImJ_T0043598.1 MGP_129S1SvImJ_G0022611.1 mouse_genomes_project 16 15651990 15710043 + MGP_129S1SvImJ_P0043598 Txnrd2 protein_coding protein_coding MGP_129S1SvImJ_T0043599.1 MGP_129S1SvImJ_G0022611.1 mouse_genomes_project 16 15651990 15710040 + MGP_129S1SvImJ_P0043599 Txnrd2 protein_coding protein_coding MGP_129S1SvImJ_T0043600.1 MGP_129S1SvImJ_G0022611.1 mouse_genomes_project 16 15652011 15687438 + MGP_129S1SvImJ_P0043600 Txnrd2 protein_coding protein_coding MGP_129S1SvImJ_T0043601.1 MGP_129S1SvImJ_G0022611.1 mouse_genomes_project 16 15652011 15710037 + MGP_129S1SvImJ_P0043601 Txnrd2 protein_coding protein_coding MGP_129S1SvImJ_T0043602.1 MGP_129S1SvImJ_G0022611.1 mouse_genomes_project 16 15652011 15710037 + MGP_129S1SvImJ_P0043602 Txnrd2 protein_coding protein_coding MGP_129S1SvImJ_T0043603.1 MGP_129S1SvImJ_G0022611.1 mouse_genomes_project 16 15652014 15710041 + MGP_129S1SvImJ_P0043603 Txnrd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043604.1 MGP_129S1SvImJ_G0022611.1 mouse_genomes_project 16 15652018 15710040 + MGP_129S1SvImJ_P0043604 Txnrd2 protein_coding protein_coding MGP_129S1SvImJ_T0043605.1 MGP_129S1SvImJ_G0022611.1 mouse_genomes_project 16 15652035 15665383 + MGP_129S1SvImJ_P0043605 Txnrd2 protein_coding protein_coding MGP_129S1SvImJ_T0043606.1 MGP_129S1SvImJ_G0022611.1 mouse_genomes_project 16 15654270 15665381 + MGP_129S1SvImJ_P0043606 Txnrd2 protein_coding protein_coding MGP_129S1SvImJ_T0043607.1 MGP_129S1SvImJ_G0022611.1 mouse_genomes_project 16 15654498 15674176 + MGP_129S1SvImJ_P0043607 Txnrd2 protein_coding protein_coding MGP_129S1SvImJ_T0043608.1 MGP_129S1SvImJ_G0022611.1 mouse_genomes_project 16 15671770 15673419 + MGP_129S1SvImJ_P0043608 Txnrd2 protein_coding protein_coding MGP_129S1SvImJ_T0043609.1 MGP_129S1SvImJ_G0022611.1 mouse_genomes_project 16 15683008 15705659 + Txnrd2 protein_coding processed_transcript MGP_129S1SvImJ_T0043610.1 MGP_129S1SvImJ_G0022611.1 mouse_genomes_project 16 15683014 15705705 + Txnrd2 protein_coding processed_transcript MGP_129S1SvImJ_T0043611.1 MGP_129S1SvImJ_G0022611.1 mouse_genomes_project 16 15702790 15705668 + Txnrd2 protein_coding processed_transcript MGP_129S1SvImJ_T0043612.1 MGP_129S1SvImJ_G0022611.1 mouse_genomes_project 16 15702820 15705657 + Txnrd2 protein_coding processed_transcript MGP_129S1SvImJ_T0010138.1 MGP_129S1SvImJ_G0008254.1 mouse_genomes_project 16 15545474 15545539 - Mir185 miRNA miRNA MGP_129S1SvImJ_T0042918.1 MGP_129S1SvImJ_G0022457.1 mouse_genomes_project 16 395120 427979 - MGP_129S1SvImJ_P0042918 Nlrc3 protein_coding protein_coding MGP_129S1SvImJ_T0042919.1 MGP_129S1SvImJ_G0022457.1 mouse_genomes_project 16 395723 428066 - MGP_129S1SvImJ_P0042919 Nlrc3 protein_coding protein_coding MGP_129S1SvImJ_T0042920.1 MGP_129S1SvImJ_G0022457.1 mouse_genomes_project 16 398935 428066 - Nlrc3 protein_coding retained_intron MGP_129S1SvImJ_T0042921.1 MGP_129S1SvImJ_G0022457.1 mouse_genomes_project 16 398944 415909 - Nlrc3 protein_coding retained_intron MGP_129S1SvImJ_T0045003.1 MGP_129S1SvImJ_G0023008.1 mouse_genomes_project 16 89866702 89868375 - MGP_129S1SvImJ_P0045003 protein_coding protein_coding MGP_129S1SvImJ_T0010178.1 MGP_129S1SvImJ_G0008294.1 mouse_genomes_project 16 91926932 91927006 + Gm22933 miRNA miRNA MGP_129S1SvImJ_T0044912.1 MGP_129S1SvImJ_G0022967.1 mouse_genomes_project 16 85293662 85312716 - MGP_129S1SvImJ_P0044912 Mrpl39 protein_coding protein_coding MGP_129S1SvImJ_T0044913.1 MGP_129S1SvImJ_G0022967.1 mouse_genomes_project 16 85311141 85312204 - Mrpl39 protein_coding processed_transcript MGP_129S1SvImJ_T0044532.1 MGP_129S1SvImJ_G0022843.1 mouse_genomes_project 16 43533276 43570046 + MGP_129S1SvImJ_P0044532 Cd200r1 protein_coding protein_coding MGP_129S1SvImJ_T0010184.1 MGP_129S1SvImJ_G0008300.1 mouse_genomes_project 16 97392068 97392192 - Gm27833 miRNA miRNA MGP_129S1SvImJ_T0043111.1 MGP_129S1SvImJ_G0022505.1 mouse_genomes_project 16 7150764 7190538 - MGP_129S1SvImJ_P0043111 Tekt5 protein_coding protein_coding MGP_129S1SvImJ_T0043112.1 MGP_129S1SvImJ_G0022505.1 mouse_genomes_project 16 7155011 7190496 - MGP_129S1SvImJ_P0043112 Tekt5 protein_coding protein_coding MGP_129S1SvImJ_T0044058.1 MGP_129S1SvImJ_G0022728.1 mouse_genomes_project 16 30109885 30133111 - MGP_129S1SvImJ_P0044058 Pigx protein_coding protein_coding MGP_129S1SvImJ_T0044059.1 MGP_129S1SvImJ_G0022728.1 mouse_genomes_project 16 30109887 30113623 - Pigx protein_coding processed_transcript MGP_129S1SvImJ_T0044060.1 MGP_129S1SvImJ_G0022728.1 mouse_genomes_project 16 30109891 30133088 - Pigx protein_coding processed_transcript MGP_129S1SvImJ_T0044061.1 MGP_129S1SvImJ_G0022728.1 mouse_genomes_project 16 30109891 30133122 - MGP_129S1SvImJ_P0044061 Pigx protein_coding protein_coding MGP_129S1SvImJ_T0044062.1 MGP_129S1SvImJ_G0022728.1 mouse_genomes_project 16 30109905 30133112 - MGP_129S1SvImJ_P0044062 Pigx protein_coding protein_coding MGP_129S1SvImJ_T0044063.1 MGP_129S1SvImJ_G0022728.1 mouse_genomes_project 16 30109926 30133091 - MGP_129S1SvImJ_P0044063 Pigx protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044064.1 MGP_129S1SvImJ_G0022728.1 mouse_genomes_project 16 30110755 30133077 - MGP_129S1SvImJ_P0044064 Pigx protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044065.1 MGP_129S1SvImJ_G0022728.1 mouse_genomes_project 16 30112763 30133080 - MGP_129S1SvImJ_P0044065 Pigx protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044066.1 MGP_129S1SvImJ_G0022728.1 mouse_genomes_project 16 30112969 30133084 - MGP_129S1SvImJ_P0044066 Pigx protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0044067.1 MGP_129S1SvImJ_G0022728.1 mouse_genomes_project 16 30130764 30133095 - MGP_129S1SvImJ_P0044067 Pigx protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0006853.1 MGP_129S1SvImJ_G0005654.1 mouse_genomes_project 16 27872302 27886842 + 4632428C04Rik lincRNA lincRNA MGP_129S1SvImJ_T0045189.1 MGP_129S1SvImJ_G0023056.1 mouse_genomes_project 16 93429482 93443014 - MGP_129S1SvImJ_P0045189 Kcne1 protein_coding protein_coding MGP_129S1SvImJ_T0045190.1 MGP_129S1SvImJ_G0023056.1 mouse_genomes_project 16 93431977 93442420 - MGP_129S1SvImJ_P0045190 Kcne1 protein_coding protein_coding MGP_129S1SvImJ_T0044672.1 MGP_129S1SvImJ_G0022881.1 mouse_genomes_project 16 54925879 54985180 - MGP_129S1SvImJ_P0044672 Nxpe3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0044884.1 MGP_129S1SvImJ_G0022955.1 mouse_genomes_project 16 75889468 75944450 - MGP_129S1SvImJ_P0044884 Samsn1 protein_coding protein_coding MGP_129S1SvImJ_T0044885.1 MGP_129S1SvImJ_G0022955.1 mouse_genomes_project 16 75889469 76065003 - MGP_129S1SvImJ_P0044885 Samsn1 protein_coding protein_coding MGP_129S1SvImJ_T0044886.1 MGP_129S1SvImJ_G0022955.1 mouse_genomes_project 16 75916601 75944380 - Samsn1 protein_coding retained_intron MGP_129S1SvImJ_T0044887.1 MGP_129S1SvImJ_G0022955.1 mouse_genomes_project 16 75917693 75944450 - Samsn1 protein_coding retained_intron MGP_129S1SvImJ_T0044888.1 MGP_129S1SvImJ_G0022955.1 mouse_genomes_project 16 75922320 75944419 - Samsn1 protein_coding retained_intron MGP_129S1SvImJ_T0013207.1 MGP_129S1SvImJ_G0011296.1 mouse_genomes_project 16 59704967 59705370 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0044982.1 MGP_129S1SvImJ_G0022989.1 mouse_genomes_project 16 89520766 89521560 - MGP_129S1SvImJ_P0044982 2310061N02Rik protein_coding protein_coding MGP_129S1SvImJ_T0003716.1 MGP_129S1SvImJ_G0003358.1 mouse_genomes_project 16 92976668 92980866 + Gm15976 antisense antisense MGP_129S1SvImJ_T0010153.1 MGP_129S1SvImJ_G0008269.1 mouse_genomes_project 16 33749343 33749453 - Gm25548 miRNA miRNA MGP_129S1SvImJ_T0044245.1 MGP_129S1SvImJ_G0022770.1 mouse_genomes_project 16 34028324 34106185 - MGP_129S1SvImJ_P0044245 Dirc2 protein_coding protein_coding MGP_129S1SvImJ_T0044246.1 MGP_129S1SvImJ_G0022770.1 mouse_genomes_project 16 34031810 34106159 - MGP_129S1SvImJ_P0044246 Dirc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045139.1 MGP_129S1SvImJ_G0023048.1 mouse_genomes_project 16 92714907 92979213 - MGP_129S1SvImJ_P0045139 Atp5o protein_coding protein_coding MGP_129S1SvImJ_T0045174.1 MGP_129S1SvImJ_G0023048.1 mouse_genomes_project 16 92977444 92983914 - MGP_129S1SvImJ_P0045174 Atp5o protein_coding protein_coding MGP_129S1SvImJ_T0045175.1 MGP_129S1SvImJ_G0023048.1 mouse_genomes_project 16 92977449 92978915 - Atp5o protein_coding retained_intron MGP_129S1SvImJ_T0045176.1 MGP_129S1SvImJ_G0023048.1 mouse_genomes_project 16 92977451 92983775 - MGP_129S1SvImJ_P0045176 Atp5o protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045177.1 MGP_129S1SvImJ_G0023048.1 mouse_genomes_project 16 92977543 92983503 - Atp5o protein_coding processed_transcript MGP_129S1SvImJ_T0045178.1 MGP_129S1SvImJ_G0023048.1 mouse_genomes_project 16 92979089 92983647 - Atp5o protein_coding processed_transcript MGP_129S1SvImJ_T0045179.1 MGP_129S1SvImJ_G0023048.1 mouse_genomes_project 16 92980391 92983780 - Atp5o protein_coding retained_intron MGP_129S1SvImJ_T0045340.1 MGP_129S1SvImJ_G0023082.1 mouse_genomes_project 16 97524177 97563202 - MGP_129S1SvImJ_P0045340 Lca5l protein_coding protein_coding MGP_129S1SvImJ_T0045341.1 MGP_129S1SvImJ_G0023082.1 mouse_genomes_project 16 97524676 97550032 - MGP_129S1SvImJ_P0045341 Lca5l protein_coding unknown_likely_coding MGP_129S1SvImJ_T0045342.1 MGP_129S1SvImJ_G0023082.1 mouse_genomes_project 16 97524838 97563209 - MGP_129S1SvImJ_P0045342 Lca5l protein_coding protein_coding MGP_129S1SvImJ_T0045343.1 MGP_129S1SvImJ_G0023082.1 mouse_genomes_project 16 97526269 97563202 - Lca5l protein_coding retained_intron MGP_129S1SvImJ_T0045344.1 MGP_129S1SvImJ_G0023082.1 mouse_genomes_project 16 97552548 97563209 - Lca5l protein_coding processed_transcript MGP_129S1SvImJ_T0100806.1 MGP_129S1SvImJ_G0038873.1 mouse_genomes_project 16 78594891 78595021 - Gm25038 snoRNA snoRNA MGP_129S1SvImJ_T0044581.1 MGP_129S1SvImJ_G0022854.1 mouse_genomes_project 16 44391483 44402561 + MGP_129S1SvImJ_P0044581 Gcsam protein_coding protein_coding MGP_129S1SvImJ_T0044582.1 MGP_129S1SvImJ_G0022854.1 mouse_genomes_project 16 44391526 44404185 + MGP_129S1SvImJ_P0044582 Gcsam protein_coding protein_coding MGP_129S1SvImJ_T0017559.1 MGP_129S1SvImJ_G0015331.1 mouse_genomes_project 16 92983465 93017997 + D430001F17Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0098842.1 MGP_129S1SvImJ_G0036922.1 mouse_genomes_project 16 93158158 93160079 + Gm16310 sense_intronic sense_intronic MGP_129S1SvImJ_T0044839.1 MGP_129S1SvImJ_G0022941.1 mouse_genomes_project 16 64289674 64364492 - MGP_129S1SvImJ_P0044839 protein_coding protein_coding MGP_129S1SvImJ_T0044391.1 MGP_129S1SvImJ_G0022812.1 mouse_genomes_project 16 36872555 36887822 + MGP_129S1SvImJ_P0044391 Gm21987 protein_coding protein_coding MGP_129S1SvImJ_T0043017.1 MGP_129S1SvImJ_G0022476.1 mouse_genomes_project 16 1458395 1460305 + MGP_129S1SvImJ_P0043017 Nudt16l1 protein_coding protein_coding MGP_129S1SvImJ_T0003687.1 MGP_129S1SvImJ_G0003336.1 mouse_genomes_project 16 30143251 30148130 + Gm15729 antisense antisense MGP_129S1SvImJ_T0010160.1 MGP_129S1SvImJ_G0008276.1 mouse_genomes_project 16 42739181 42739307 + Mir3470b miRNA miRNA MGP_129S1SvImJ_T0100773.1 MGP_129S1SvImJ_G0038840.1 mouse_genomes_project 16 20669565 20669634 + Snord2 snoRNA snoRNA MGP_129S1SvImJ_T0043420.1 MGP_129S1SvImJ_G0022577.1 mouse_genomes_project 16 14419057 14556626 - MGP_129S1SvImJ_P0043420 Pi4ka protein_coding protein_coding MGP_129S1SvImJ_T0043421.1 MGP_129S1SvImJ_G0022577.1 mouse_genomes_project 16 14419058 14420352 - Pi4ka protein_coding retained_intron MGP_129S1SvImJ_T0043422.1 MGP_129S1SvImJ_G0022577.1 mouse_genomes_project 16 14419058 14423670 - Pi4ka protein_coding retained_intron MGP_129S1SvImJ_T0043423.1 MGP_129S1SvImJ_G0022577.1 mouse_genomes_project 16 14419058 14450780 - MGP_129S1SvImJ_P0043423 Pi4ka protein_coding protein_coding MGP_129S1SvImJ_T0043424.1 MGP_129S1SvImJ_G0022577.1 mouse_genomes_project 16 14419058 14556205 - MGP_129S1SvImJ_P0043424 Pi4ka protein_coding protein_coding MGP_129S1SvImJ_T0043425.1 MGP_129S1SvImJ_G0022577.1 mouse_genomes_project 16 14419059 14420782 - Pi4ka protein_coding retained_intron MGP_129S1SvImJ_T0043426.1 MGP_129S1SvImJ_G0022577.1 mouse_genomes_project 16 14421528 14422832 - Pi4ka protein_coding retained_intron MGP_129S1SvImJ_T0043427.1 MGP_129S1SvImJ_G0022577.1 mouse_genomes_project 16 14439381 14450403 - MGP_129S1SvImJ_P0043427 Pi4ka protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043428.1 MGP_129S1SvImJ_G0022577.1 mouse_genomes_project 16 14450891 14469151 - MGP_129S1SvImJ_P0043428 Pi4ka protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043429.1 MGP_129S1SvImJ_G0022577.1 mouse_genomes_project 16 14455125 14496094 - MGP_129S1SvImJ_P0043429 Pi4ka protein_coding protein_coding MGP_129S1SvImJ_T0043430.1 MGP_129S1SvImJ_G0022577.1 mouse_genomes_project 16 14466633 14496056 - Pi4ka protein_coding retained_intron MGP_129S1SvImJ_T0043433.1 MGP_129S1SvImJ_G0022577.1 mouse_genomes_project 16 14509272 14556205 - Pi4ka protein_coding retained_intron MGP_129S1SvImJ_T0102270.1 MGP_129S1SvImJ_G0040104.1 mouse_genomes_project 16 13770944 13771065 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0044761.1 MGP_129S1SvImJ_G0022905.1 mouse_genomes_project 16 57846386 57860259 + MGP_129S1SvImJ_P0044761 Cpox protein_coding protein_coding MGP_129S1SvImJ_T0044180.1 MGP_129S1SvImJ_G0022753.1 mouse_genomes_project 16 31363599 31422906 + MGP_129S1SvImJ_P0044180 Osbpl11 protein_coding protein_coding MGP_129S1SvImJ_T0006861.1 MGP_129S1SvImJ_G0005662.1 mouse_genomes_project 16 42107944 42117624 - Gm15713 lincRNA lincRNA MGP_129S1SvImJ_T0044325.1 MGP_129S1SvImJ_G0022795.1 mouse_genomes_project 16 35296639 35309102 + Golgb1 protein_coding processed_transcript MGP_129S1SvImJ_T0044326.1 MGP_129S1SvImJ_G0022795.1 mouse_genomes_project 16 35296640 35310903 + MGP_129S1SvImJ_P0044326 Golgb1 protein_coding protein_coding MGP_129S1SvImJ_T0044327.1 MGP_129S1SvImJ_G0022795.1 mouse_genomes_project 16 35296640 35297138 + MGP_129S1SvImJ_P0044327 Golgb1 protein_coding protein_coding MGP_129S1SvImJ_T0044328.1 MGP_129S1SvImJ_G0022795.1 mouse_genomes_project 16 35296667 35355806 + MGP_129S1SvImJ_P0044328 Golgb1 protein_coding protein_coding MGP_129S1SvImJ_T0044329.1 MGP_129S1SvImJ_G0022795.1 mouse_genomes_project 16 35296701 35310905 + MGP_129S1SvImJ_P0044329 Golgb1 protein_coding protein_coding MGP_129S1SvImJ_T0044330.1 MGP_129S1SvImJ_G0022795.1 mouse_genomes_project 16 35296713 35355808 + MGP_129S1SvImJ_P0044330 Golgb1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0044331.1 MGP_129S1SvImJ_G0022795.1 mouse_genomes_project 16 35347177 35351092 + Golgb1 protein_coding retained_intron MGP_129S1SvImJ_T0044332.1 MGP_129S1SvImJ_G0022795.1 mouse_genomes_project 16 35354120 35354794 + Golgb1 protein_coding retained_intron MGP_129S1SvImJ_T0044187.1 MGP_129S1SvImJ_G0022757.1 mouse_genomes_project 16 31902091 31944879 + Heg1 protein_coding retained_intron MGP_129S1SvImJ_T0044188.1 MGP_129S1SvImJ_G0022757.1 mouse_genomes_project 16 31902091 31996295 + MGP_129S1SvImJ_P0044188 Heg1 protein_coding protein_coding MGP_129S1SvImJ_T0044189.1 MGP_129S1SvImJ_G0022757.1 mouse_genomes_project 16 31902170 31994162 + MGP_129S1SvImJ_P0044189 Heg1 protein_coding protein_coding MGP_129S1SvImJ_T0044190.1 MGP_129S1SvImJ_G0022757.1 mouse_genomes_project 16 31902203 31996276 + MGP_129S1SvImJ_P0044190 Heg1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0044191.1 MGP_129S1SvImJ_G0022757.1 mouse_genomes_project 16 31954260 31962935 + Heg1 protein_coding processed_transcript MGP_129S1SvImJ_T0044192.1 MGP_129S1SvImJ_G0022757.1 mouse_genomes_project 16 31977316 31985133 + Heg1 protein_coding retained_intron MGP_129S1SvImJ_T0044193.1 MGP_129S1SvImJ_G0022757.1 mouse_genomes_project 16 31979710 31993553 + Heg1 protein_coding processed_transcript MGP_129S1SvImJ_T0044194.1 MGP_129S1SvImJ_G0022757.1 mouse_genomes_project 16 31980683 31984979 + Heg1 protein_coding retained_intron MGP_129S1SvImJ_T0044905.1 MGP_129S1SvImJ_G0022964.1 mouse_genomes_project 16 79103320 79125981 + MGP_129S1SvImJ_P0044905 Chodl protein_coding protein_coding MGP_129S1SvImJ_T0044906.1 MGP_129S1SvImJ_G0022964.1 mouse_genomes_project 16 79103320 79121448 + MGP_129S1SvImJ_P0044906 Chodl protein_coding protein_coding MGP_129S1SvImJ_T0044907.1 MGP_129S1SvImJ_G0022964.1 mouse_genomes_project 16 79103320 79124151 + MGP_129S1SvImJ_P0044907 Chodl protein_coding protein_coding MGP_129S1SvImJ_T0042954.1 MGP_129S1SvImJ_G0022462.1 mouse_genomes_project 16 757778 789331 - MGP_129S1SvImJ_P0042954 Adcy9 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0042955.1 MGP_129S1SvImJ_G0022462.1 mouse_genomes_project 16 760427 888724 - MGP_129S1SvImJ_P0042955 Adcy9 protein_coding protein_coding MGP_129S1SvImJ_T0042956.1 MGP_129S1SvImJ_G0022462.1 mouse_genomes_project 16 760427 888034 - MGP_129S1SvImJ_P0042956 Adcy9 protein_coding protein_coding MGP_129S1SvImJ_T0042957.1 MGP_129S1SvImJ_G0022462.1 mouse_genomes_project 16 760443 887813 - MGP_129S1SvImJ_P0042957 Adcy9 protein_coding protein_coding MGP_129S1SvImJ_T0044287.1 MGP_129S1SvImJ_G0022789.1 mouse_genomes_project 16 34893145 34961337 - MGP_129S1SvImJ_P0044287 Casr protein_coding protein_coding MGP_129S1SvImJ_T0044288.1 MGP_129S1SvImJ_G0022789.1 mouse_genomes_project 16 34893145 34961337 - MGP_129S1SvImJ_P0044288 Casr protein_coding protein_coding MGP_129S1SvImJ_T0044289.1 MGP_129S1SvImJ_G0022789.1 mouse_genomes_project 16 34893916 34960809 - MGP_129S1SvImJ_P0044289 Casr protein_coding protein_coding MGP_129S1SvImJ_T0044290.1 MGP_129S1SvImJ_G0022789.1 mouse_genomes_project 16 34917570 34961344 - Casr protein_coding processed_transcript MGP_129S1SvImJ_T0010149.1 MGP_129S1SvImJ_G0008265.1 mouse_genomes_project 16 29210794 29210889 + Gm27415 miRNA miRNA MGP_129S1SvImJ_T0003681.1 MGP_129S1SvImJ_G0003331.1 mouse_genomes_project 16 15832932 15852506 + 4930588K23Rik antisense antisense MGP_129S1SvImJ_T0044878.1 MGP_129S1SvImJ_G0022953.1 mouse_genomes_project 16 75615984 75629678 + MGP_129S1SvImJ_P0044878 Rbm11 protein_coding protein_coding MGP_129S1SvImJ_T0044879.1 MGP_129S1SvImJ_G0022953.1 mouse_genomes_project 16 75615984 75628544 + MGP_129S1SvImJ_P0044879 Rbm11 protein_coding protein_coding MGP_129S1SvImJ_T0044880.1 MGP_129S1SvImJ_G0022953.1 mouse_genomes_project 16 75616031 75629674 + MGP_129S1SvImJ_P0044880 Rbm11 protein_coding protein_coding MGP_129S1SvImJ_T0043062.1 MGP_129S1SvImJ_G0022491.1 mouse_genomes_project 16 5063551 5079216 - MGP_129S1SvImJ_P0043062 Tmem114 protein_coding protein_coding MGP_129S1SvImJ_T0044236.1 MGP_129S1SvImJ_G0022768.1 mouse_genomes_project 16 33704699 33802475 - MGP_129S1SvImJ_P0044236 Pdia5 protein_coding protein_coding MGP_129S1SvImJ_T0043827.1 MGP_129S1SvImJ_G0022664.1 mouse_genomes_project 16 19410082 19458794 - MGP_129S1SvImJ_P0043827 Liph protein_coding protein_coding MGP_129S1SvImJ_T0043828.1 MGP_129S1SvImJ_G0022664.1 mouse_genomes_project 16 19410082 19458794 - MGP_129S1SvImJ_P0043828 Liph protein_coding protein_coding MGP_129S1SvImJ_T0045020.1 MGP_129S1SvImJ_G0023023.1 mouse_genomes_project 16 90680550 90754228 - MGP_129S1SvImJ_P0045020 Tiam1 protein_coding protein_coding MGP_129S1SvImJ_T0045021.1 MGP_129S1SvImJ_G0023023.1 mouse_genomes_project 16 90680550 90870931 - MGP_129S1SvImJ_P0045021 Tiam1 protein_coding protein_coding MGP_129S1SvImJ_T0045022.1 MGP_129S1SvImJ_G0023023.1 mouse_genomes_project 16 90680550 90859174 - MGP_129S1SvImJ_P0045022 Tiam1 protein_coding protein_coding MGP_129S1SvImJ_T0045023.1 MGP_129S1SvImJ_G0023023.1 mouse_genomes_project 16 90680550 90870931 - MGP_129S1SvImJ_P0045023 Tiam1 protein_coding protein_coding MGP_129S1SvImJ_T0045024.1 MGP_129S1SvImJ_G0023023.1 mouse_genomes_project 16 90680555 90693273 - MGP_129S1SvImJ_P0045024 Tiam1 protein_coding protein_coding MGP_129S1SvImJ_T0045025.1 MGP_129S1SvImJ_G0023023.1 mouse_genomes_project 16 90682968 90714760 - MGP_129S1SvImJ_P0045025 Tiam1 protein_coding protein_coding MGP_129S1SvImJ_T0045026.1 MGP_129S1SvImJ_G0023023.1 mouse_genomes_project 16 90683096 90734286 - Tiam1 protein_coding retained_intron MGP_129S1SvImJ_T0045027.1 MGP_129S1SvImJ_G0023023.1 mouse_genomes_project 16 90683660 90690525 - Tiam1 protein_coding processed_transcript MGP_129S1SvImJ_T0045028.1 MGP_129S1SvImJ_G0023023.1 mouse_genomes_project 16 90686923 90695231 - MGP_129S1SvImJ_P0045028 Tiam1 protein_coding protein_coding MGP_129S1SvImJ_T0045029.1 MGP_129S1SvImJ_G0023023.1 mouse_genomes_project 16 90794295 90870931 - Tiam1 protein_coding processed_transcript MGP_129S1SvImJ_T0045030.1 MGP_129S1SvImJ_G0023023.1 mouse_genomes_project 16 90794336 90859084 - Tiam1 protein_coding processed_transcript MGP_129S1SvImJ_T0045031.1 MGP_129S1SvImJ_G0023023.1 mouse_genomes_project 16 90794406 90816873 - Tiam1 protein_coding processed_transcript MGP_129S1SvImJ_T0045032.1 MGP_129S1SvImJ_G0023023.1 mouse_genomes_project 16 90806099 90854352 - Tiam1 protein_coding retained_intron MGP_129S1SvImJ_T0045033.1 MGP_129S1SvImJ_G0023023.1 mouse_genomes_project 16 90806429 90870131 - Tiam1 protein_coding processed_transcript MGP_129S1SvImJ_T0045034.1 MGP_129S1SvImJ_G0023023.1 mouse_genomes_project 16 90854209 90876307 - Tiam1 protein_coding processed_transcript MGP_129S1SvImJ_T0042983.1 MGP_129S1SvImJ_G0022469.1 mouse_genomes_project 16 1142660 1193357 + Dnaja3 protein_coding processed_transcript MGP_129S1SvImJ_T0042987.1 MGP_129S1SvImJ_G0022469.1 mouse_genomes_project 16 1188728 1217898 + MGP_129S1SvImJ_P0042987 Dnaja3 protein_coding protein_coding MGP_129S1SvImJ_T0042988.1 MGP_129S1SvImJ_G0022469.1 mouse_genomes_project 16 1188754 1217898 + MGP_129S1SvImJ_P0042988 Dnaja3 protein_coding protein_coding MGP_129S1SvImJ_T0042989.1 MGP_129S1SvImJ_G0022469.1 mouse_genomes_project 16 1188772 1204395 + Dnaja3 protein_coding retained_intron MGP_129S1SvImJ_T0013188.1 MGP_129S1SvImJ_G0011277.1 mouse_genomes_project 16 37289546 37291138 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0044423.1 MGP_129S1SvImJ_G0022820.1 mouse_genomes_project 16 37134038 37260738 - MGP_129S1SvImJ_P0044423 Arhgap31 protein_coding protein_coding MGP_129S1SvImJ_T0044424.1 MGP_129S1SvImJ_G0022820.1 mouse_genomes_project 16 37160511 37260335 - Arhgap31 protein_coding processed_transcript MGP_129S1SvImJ_T0044425.1 MGP_129S1SvImJ_G0022820.1 mouse_genomes_project 16 37174671 37260334 - Arhgap31 protein_coding retained_intron MGP_129S1SvImJ_T0044649.1 MGP_129S1SvImJ_G0022875.1 mouse_genomes_project 16 49093517 49345816 - MGP_129S1SvImJ_P0044649 Bbx protein_coding protein_coding MGP_129S1SvImJ_T0044650.1 MGP_129S1SvImJ_G0022875.1 mouse_genomes_project 16 49097453 49345766 - MGP_129S1SvImJ_P0044650 Bbx protein_coding protein_coding MGP_129S1SvImJ_T0044651.1 MGP_129S1SvImJ_G0022875.1 mouse_genomes_project 16 49098289 49345815 - MGP_129S1SvImJ_P0044651 Bbx protein_coding protein_coding MGP_129S1SvImJ_T0044652.1 MGP_129S1SvImJ_G0022875.1 mouse_genomes_project 16 49098814 49239319 - MGP_129S1SvImJ_P0044652 Bbx protein_coding protein_coding MGP_129S1SvImJ_T0044653.1 MGP_129S1SvImJ_G0022875.1 mouse_genomes_project 16 49112132 49345800 - MGP_129S1SvImJ_P0044653 Bbx protein_coding protein_coding MGP_129S1SvImJ_T0044654.1 MGP_129S1SvImJ_G0022875.1 mouse_genomes_project 16 49120178 49345815 - MGP_129S1SvImJ_P0044654 Bbx protein_coding protein_coding MGP_129S1SvImJ_T0044655.1 MGP_129S1SvImJ_G0022875.1 mouse_genomes_project 16 49126466 49343410 - Bbx protein_coding processed_transcript MGP_129S1SvImJ_T0044656.1 MGP_129S1SvImJ_G0022875.1 mouse_genomes_project 16 49339456 49345735 - Bbx protein_coding retained_intron MGP_129S1SvImJ_T0044657.1 MGP_129S1SvImJ_G0022875.1 mouse_genomes_project 16 49340878 49345773 - Bbx protein_coding processed_transcript MGP_129S1SvImJ_T0013149.1 MGP_129S1SvImJ_G0011238.1 mouse_genomes_project 16 11063570 11064581 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0043075.1 MGP_129S1SvImJ_G0022494.1 mouse_genomes_project 16 5287367 5288248 - MGP_129S1SvImJ_P0043075 protein_coding protein_coding MGP_129S1SvImJ_T0100809.1 MGP_129S1SvImJ_G0038876.1 mouse_genomes_project 16 85774248 85774401 + Gm27295 snoRNA snoRNA MGP_129S1SvImJ_T0000982.1 MGP_129S1SvImJ_G0000913.1 mouse_genomes_project 16 42000539 42000886 - TEC TEC MGP_129S1SvImJ_T0044481.1 MGP_129S1SvImJ_G0022832.1 mouse_genomes_project 16 42686898 42696914 - MGP_129S1SvImJ_P0044481 Zdhhc23 protein_coding protein_coding MGP_129S1SvImJ_T0044482.1 MGP_129S1SvImJ_G0022832.1 mouse_genomes_project 16 42686966 42696871 - MGP_129S1SvImJ_P0044482 Zdhhc23 protein_coding protein_coding MGP_129S1SvImJ_T0043553.1 MGP_129S1SvImJ_G0022605.1 mouse_genomes_project 16 15447046 15455826 - MGP_129S1SvImJ_P0043553 Ranbp1 protein_coding protein_coding MGP_129S1SvImJ_T0043554.1 MGP_129S1SvImJ_G0022605.1 mouse_genomes_project 16 15452232 15455910 - Ranbp1 protein_coding retained_intron MGP_129S1SvImJ_T0043555.1 MGP_129S1SvImJ_G0022605.1 mouse_genomes_project 16 15452468 15455698 - Ranbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0013210.1 MGP_129S1SvImJ_G0011299.1 mouse_genomes_project 16 60438346 60438605 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100800.1 MGP_129S1SvImJ_G0038867.1 mouse_genomes_project 16 64705524 64705654 - Gm22429 snoRNA snoRNA MGP_129S1SvImJ_T0044108.1 MGP_129S1SvImJ_G0022743.1 mouse_genomes_project 16 30738836 30769463 + Tnk2 protein_coding processed_transcript MGP_129S1SvImJ_T0044109.1 MGP_129S1SvImJ_G0022743.1 mouse_genomes_project 16 30739253 30765072 + Tnk2 protein_coding processed_transcript MGP_129S1SvImJ_T0044110.1 MGP_129S1SvImJ_G0022743.1 mouse_genomes_project 16 30739605 30784671 + MGP_129S1SvImJ_P0044110 Tnk2 protein_coding protein_coding MGP_129S1SvImJ_T0044111.1 MGP_129S1SvImJ_G0022743.1 mouse_genomes_project 16 30739605 30784671 + MGP_129S1SvImJ_P0044111 Tnk2 protein_coding protein_coding MGP_129S1SvImJ_T0044112.1 MGP_129S1SvImJ_G0022743.1 mouse_genomes_project 16 30739635 30784671 + MGP_129S1SvImJ_P0044112 Tnk2 protein_coding protein_coding MGP_129S1SvImJ_T0044113.1 MGP_129S1SvImJ_G0022743.1 mouse_genomes_project 16 30739788 30784670 + MGP_129S1SvImJ_P0044113 Tnk2 protein_coding protein_coding MGP_129S1SvImJ_T0044114.1 MGP_129S1SvImJ_G0022743.1 mouse_genomes_project 16 30739921 30769476 + Tnk2 protein_coding processed_transcript MGP_129S1SvImJ_T0044115.1 MGP_129S1SvImJ_G0022743.1 mouse_genomes_project 16 30758195 30769455 + Tnk2 protein_coding processed_transcript MGP_129S1SvImJ_T0044116.1 MGP_129S1SvImJ_G0022743.1 mouse_genomes_project 16 30769423 30772812 + Tnk2 protein_coding processed_transcript MGP_129S1SvImJ_T0044117.1 MGP_129S1SvImJ_G0022743.1 mouse_genomes_project 16 30774331 30780644 + MGP_129S1SvImJ_P0044117 Tnk2 protein_coding protein_coding MGP_129S1SvImJ_T0044118.1 MGP_129S1SvImJ_G0022743.1 mouse_genomes_project 16 30774333 30784671 + MGP_129S1SvImJ_P0044118 Tnk2 protein_coding protein_coding MGP_129S1SvImJ_T0044119.1 MGP_129S1SvImJ_G0022743.1 mouse_genomes_project 16 30774355 30780858 + MGP_129S1SvImJ_P0044119 Tnk2 protein_coding protein_coding MGP_129S1SvImJ_T0044120.1 MGP_129S1SvImJ_G0022743.1 mouse_genomes_project 16 30774369 30781311 + MGP_129S1SvImJ_P0044120 Tnk2 protein_coding protein_coding MGP_129S1SvImJ_T0044121.1 MGP_129S1SvImJ_G0022743.1 mouse_genomes_project 16 30774372 30780242 + Tnk2 protein_coding retained_intron MGP_129S1SvImJ_T0044122.1 MGP_129S1SvImJ_G0022743.1 mouse_genomes_project 16 30774376 30781060 + MGP_129S1SvImJ_P0044122 Tnk2 protein_coding protein_coding MGP_129S1SvImJ_T0013220.1 MGP_129S1SvImJ_G0011309.1 mouse_genomes_project 16 81384700 81385310 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0044692.1 MGP_129S1SvImJ_G0022887.1 mouse_genomes_project 16 55180819 55182522 + Senp7 protein_coding processed_transcript MGP_129S1SvImJ_T0044693.1 MGP_129S1SvImJ_G0022887.1 mouse_genomes_project 16 55180824 55235095 + MGP_129S1SvImJ_P0044693 Senp7 protein_coding protein_coding MGP_129S1SvImJ_T0044694.1 MGP_129S1SvImJ_G0022887.1 mouse_genomes_project 16 55180840 55297740 + MGP_129S1SvImJ_P0044694 Senp7 protein_coding protein_coding MGP_129S1SvImJ_T0044695.1 MGP_129S1SvImJ_G0022887.1 mouse_genomes_project 16 55180879 55235090 + Senp7 protein_coding processed_transcript MGP_129S1SvImJ_T0044696.1 MGP_129S1SvImJ_G0022887.1 mouse_genomes_project 16 55180890 55206072 + Senp7 protein_coding retained_intron MGP_129S1SvImJ_T0044697.1 MGP_129S1SvImJ_G0022887.1 mouse_genomes_project 16 55180890 55232521 + MGP_129S1SvImJ_P0044697 Senp7 protein_coding protein_coding MGP_129S1SvImJ_T0044698.1 MGP_129S1SvImJ_G0022887.1 mouse_genomes_project 16 55180895 55234971 + Senp7 protein_coding processed_transcript MGP_129S1SvImJ_T0044699.1 MGP_129S1SvImJ_G0022887.1 mouse_genomes_project 16 55180895 55248961 + MGP_129S1SvImJ_P0044699 Senp7 protein_coding protein_coding MGP_129S1SvImJ_T0044700.1 MGP_129S1SvImJ_G0022887.1 mouse_genomes_project 16 55289359 55298098 + Senp7 protein_coding retained_intron MGP_129S1SvImJ_T0044701.1 MGP_129S1SvImJ_G0022887.1 mouse_genomes_project 16 55289833 55297707 + Senp7 protein_coding retained_intron MGP_129S1SvImJ_T0044702.1 MGP_129S1SvImJ_G0022887.1 mouse_genomes_project 16 55291818 55299350 + Senp7 protein_coding processed_transcript MGP_129S1SvImJ_T0044703.1 MGP_129S1SvImJ_G0022887.1 mouse_genomes_project 16 55292995 55297612 + Senp7 protein_coding processed_transcript MGP_129S1SvImJ_T0044704.1 MGP_129S1SvImJ_G0022887.1 mouse_genomes_project 16 55295479 55298087 + Senp7 protein_coding processed_transcript MGP_129S1SvImJ_T0044801.1 MGP_129S1SvImJ_G0022927.1 mouse_genomes_project 16 58609904 58610909 - MGP_129S1SvImJ_P0044801 Olfr206 protein_coding protein_coding MGP_129S1SvImJ_T0043938.1 MGP_129S1SvImJ_G0022697.1 mouse_genomes_project 16 24714568 24747301 - MGP_129S1SvImJ_P0043938 Gmnc protein_coding protein_coding MGP_129S1SvImJ_T0043939.1 MGP_129S1SvImJ_G0022697.1 mouse_genomes_project 16 24717601 24725198 - MGP_129S1SvImJ_P0043939 Gmnc protein_coding unknown_likely_coding MGP_129S1SvImJ_T0043629.1 MGP_129S1SvImJ_G0022617.1 mouse_genomes_project 16 16032812 16034226 + MGP_129S1SvImJ_P0043629 Cldn5 protein_coding protein_coding MGP_129S1SvImJ_T0045018.1 MGP_129S1SvImJ_G0023021.1 mouse_genomes_project 16 90357484 90358104 - MGP_129S1SvImJ_P0045018 Krtap7-1 protein_coding protein_coding MGP_129S1SvImJ_T0043472.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14788917 14815508 + MGP_129S1SvImJ_P0043472 Smpd4 protein_coding protein_coding MGP_129S1SvImJ_T0043473.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14788920 14809955 + Smpd4 protein_coding processed_transcript MGP_129S1SvImJ_T0043474.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14788920 14815507 + MGP_129S1SvImJ_P0043474 Smpd4 protein_coding protein_coding MGP_129S1SvImJ_T0043475.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14788920 14796010 + MGP_129S1SvImJ_P0043475 Smpd4 protein_coding protein_coding MGP_129S1SvImJ_T0043476.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14788923 14814027 + MGP_129S1SvImJ_P0043476 Smpd4 protein_coding protein_coding MGP_129S1SvImJ_T0043477.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14788923 14796212 + MGP_129S1SvImJ_P0043477 Smpd4 protein_coding protein_coding MGP_129S1SvImJ_T0043478.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14788926 14793848 + Smpd4 protein_coding retained_intron MGP_129S1SvImJ_T0043479.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14788926 14815507 + Smpd4 protein_coding retained_intron MGP_129S1SvImJ_T0043480.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14788926 14791559 + Smpd4 protein_coding retained_intron MGP_129S1SvImJ_T0043481.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14788926 14815507 + MGP_129S1SvImJ_P0043481 Smpd4 protein_coding protein_coding MGP_129S1SvImJ_T0043482.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14788926 14795404 + MGP_129S1SvImJ_P0043482 Smpd4 protein_coding protein_coding MGP_129S1SvImJ_T0043483.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14788937 14809205 + MGP_129S1SvImJ_P0043483 Smpd4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043484.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14788940 14796249 + MGP_129S1SvImJ_P0043484 Smpd4 protein_coding protein_coding MGP_129S1SvImJ_T0043485.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14788944 14812828 + Smpd4 protein_coding retained_intron MGP_129S1SvImJ_T0043486.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14788952 14795568 + MGP_129S1SvImJ_P0043486 Smpd4 protein_coding protein_coding MGP_129S1SvImJ_T0043487.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14789080 14793510 + MGP_129S1SvImJ_P0043487 Smpd4 protein_coding protein_coding MGP_129S1SvImJ_T0043488.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14791050 14813483 + MGP_129S1SvImJ_P0043488 Smpd4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0043489.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14791050 14813483 + MGP_129S1SvImJ_P0043489 Smpd4 protein_coding protein_coding MGP_129S1SvImJ_T0043490.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14791050 14813483 + MGP_129S1SvImJ_P0043490 Smpd4 protein_coding protein_coding MGP_129S1SvImJ_T0043491.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14791050 14813483 + MGP_129S1SvImJ_P0043491 Smpd4 protein_coding protein_coding MGP_129S1SvImJ_T0043492.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14791050 14813483 + MGP_129S1SvImJ_P0043492 Smpd4 protein_coding protein_coding MGP_129S1SvImJ_T0043493.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14809001 14811742 + Smpd4 protein_coding retained_intron MGP_129S1SvImJ_T0043494.1 MGP_129S1SvImJ_G0022587.1 mouse_genomes_project 16 14809266 14811646 + Smpd4 protein_coding retained_intron MGP_129S1SvImJ_T0010170.1 MGP_129S1SvImJ_G0008286.1 mouse_genomes_project 16 73908739 73908837 + Gm24272 miRNA miRNA MGP_129S1SvImJ_T0013177.1 MGP_129S1SvImJ_G0011266.1 mouse_genomes_project 16 27127889 27128283 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006843.1 MGP_129S1SvImJ_G0005646.1 mouse_genomes_project 16 18664273 18714727 - lincRNA lincRNA MGP_129S1SvImJ_T0100777.1 MGP_129S1SvImJ_G0038844.1 mouse_genomes_project 16 20672230 20672369 + Gm24616 snoRNA snoRNA MGP_129S1SvImJ_T0045369.1 MGP_129S1SvImJ_G0023089.1 mouse_genomes_project 16 98785816 98866905 + MGP_129S1SvImJ_P0045369 Bace2 protein_coding protein_coding MGP_129S1SvImJ_T0043229.1 MGP_129S1SvImJ_G0022535.1 mouse_genomes_project 16 10778779 10814108 + MGP_129S1SvImJ_P0043229 Rrn3 protein_coding protein_coding MGP_129S1SvImJ_T0043146.1 MGP_129S1SvImJ_G0022516.1 mouse_genomes_project 16 7640657 7640737 + MGP_129S1SvImJ_P0043146 Gm11172 protein_coding protein_coding MGP_129S1SvImJ_T0046477.1 MGP_129S1SvImJ_G0023428.1 mouse_genomes_project 17 27176534 27191127 + MGP_129S1SvImJ_P0046477 Snrpc protein_coding protein_coding MGP_129S1SvImJ_T0046478.1 MGP_129S1SvImJ_G0023428.1 mouse_genomes_project 17 27176694 27191131 + Snrpc protein_coding retained_intron MGP_129S1SvImJ_T0047091.1 MGP_129S1SvImJ_G0023567.1 mouse_genomes_project 17 34268402 34275168 + MGP_129S1SvImJ_P0047091 H2-Ab1 protein_coding protein_coding MGP_129S1SvImJ_T0047092.1 MGP_129S1SvImJ_G0023567.1 mouse_genomes_project 17 34272851 34273784 + H2-Ab1 protein_coding retained_intron MGP_129S1SvImJ_T0047093.1 MGP_129S1SvImJ_G0023567.1 mouse_genomes_project 17 34274019 34275144 + H2-Ab1 protein_coding retained_intron MGP_129S1SvImJ_T0048116.1 MGP_129S1SvImJ_G0023867.1 mouse_genomes_project 17 49569979 49584024 + MGP_129S1SvImJ_P0048116 Treml2 protein_coding protein_coding MGP_129S1SvImJ_T0047738.1 MGP_129S1SvImJ_G0023750.1 mouse_genomes_project 17 40885837 40891058 + MGP_129S1SvImJ_P0047738 Esp18 protein_coding protein_coding MGP_129S1SvImJ_T0013290.1 MGP_129S1SvImJ_G0011379.1 mouse_genomes_project 17 55523410 55524537 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0045550.1 MGP_129S1SvImJ_G0023150.1 mouse_genomes_project 17 10505218 10536889 - MGP_129S1SvImJ_P0045550 Mas1 protein_coding protein_coding MGP_129S1SvImJ_T0045551.1 MGP_129S1SvImJ_G0023150.1 mouse_genomes_project 17 10505254 10519669 - MGP_129S1SvImJ_P0045551 Mas1 protein_coding protein_coding MGP_129S1SvImJ_T0045552.1 MGP_129S1SvImJ_G0023150.1 mouse_genomes_project 17 10505254 10519549 - MGP_129S1SvImJ_P0045552 Mas1 protein_coding protein_coding MGP_129S1SvImJ_T0045553.1 MGP_129S1SvImJ_G0023150.1 mouse_genomes_project 17 10505254 10519669 - MGP_129S1SvImJ_P0045553 Mas1 protein_coding protein_coding MGP_129S1SvImJ_T0045554.1 MGP_129S1SvImJ_G0023150.1 mouse_genomes_project 17 10505254 10513390 - MGP_129S1SvImJ_P0045554 Mas1 protein_coding protein_coding MGP_129S1SvImJ_T0045555.1 MGP_129S1SvImJ_G0023150.1 mouse_genomes_project 17 10506343 10517116 - MGP_129S1SvImJ_P0045555 Mas1 protein_coding protein_coding MGP_129S1SvImJ_T0045556.1 MGP_129S1SvImJ_G0023150.1 mouse_genomes_project 17 10506446 10517102 - MGP_129S1SvImJ_P0045556 Mas1 protein_coding protein_coding MGP_129S1SvImJ_T0045557.1 MGP_129S1SvImJ_G0023150.1 mouse_genomes_project 17 10506457 10517116 - MGP_129S1SvImJ_P0045557 Mas1 protein_coding protein_coding MGP_129S1SvImJ_T0045558.1 MGP_129S1SvImJ_G0023150.1 mouse_genomes_project 17 10506600 10521987 - MGP_129S1SvImJ_P0045558 Mas1 protein_coding protein_coding MGP_129S1SvImJ_T0048261.1 MGP_129S1SvImJ_G0023923.1 mouse_genomes_project 17 57976525 57982704 - MGP_129S1SvImJ_P0048261 Arrdc5 protein_coding protein_coding MGP_129S1SvImJ_T0046559.1 MGP_129S1SvImJ_G0023442.1 mouse_genomes_project 17 27946608 27957841 + MGP_129S1SvImJ_P0046559 Armc12 protein_coding protein_coding MGP_129S1SvImJ_T0048446.1 MGP_129S1SvImJ_G0023990.1 mouse_genomes_project 17 68902098 69627124 - MGP_129S1SvImJ_P0048446 Ptprm protein_coding protein_coding MGP_129S1SvImJ_T0048447.1 MGP_129S1SvImJ_G0023990.1 mouse_genomes_project 17 69011116 69626694 - MGP_129S1SvImJ_P0048447 Ptprm protein_coding unknown_likely_coding MGP_129S1SvImJ_T0047808.1 MGP_129S1SvImJ_G0023785.1 mouse_genomes_project 17 45754665 46101541 + MGP_129S1SvImJ_P0047808 Supt3 protein_coding protein_coding MGP_129S1SvImJ_T0047809.1 MGP_129S1SvImJ_G0023785.1 mouse_genomes_project 17 45754838 45911134 + Supt3 protein_coding processed_transcript MGP_129S1SvImJ_T0047810.1 MGP_129S1SvImJ_G0023785.1 mouse_genomes_project 17 45754909 46101537 + MGP_129S1SvImJ_P0047810 Supt3 protein_coding protein_coding MGP_129S1SvImJ_T0047811.1 MGP_129S1SvImJ_G0023785.1 mouse_genomes_project 17 45764461 46101530 + MGP_129S1SvImJ_P0047811 Supt3 protein_coding protein_coding MGP_129S1SvImJ_T0048563.1 MGP_129S1SvImJ_G0024025.1 mouse_genomes_project 17 76820569 76823598 + MGP_129S1SvImJ_P0048563 protein_coding protein_coding MGP_129S1SvImJ_T0048564.1 MGP_129S1SvImJ_G0024025.1 mouse_genomes_project 17 76820724 76823598 + MGP_129S1SvImJ_P0048564 protein_coding protein_coding MGP_129S1SvImJ_T0048565.1 MGP_129S1SvImJ_G0024025.1 mouse_genomes_project 17 76820724 76823593 + MGP_129S1SvImJ_P0048565 protein_coding protein_coding MGP_129S1SvImJ_T0048373.1 MGP_129S1SvImJ_G0023968.1 mouse_genomes_project 17 60797394 60812056 - MGP_129S1SvImJ_P0048373 Nudt12 protein_coding protein_coding MGP_129S1SvImJ_T0048374.1 MGP_129S1SvImJ_G0023968.1 mouse_genomes_project 17 60797887 60802391 - Nudt12 protein_coding retained_intron MGP_129S1SvImJ_T0048375.1 MGP_129S1SvImJ_G0023968.1 mouse_genomes_project 17 60805078 60811952 - MGP_129S1SvImJ_P0048375 Nudt12 protein_coding protein_coding MGP_129S1SvImJ_T0102321.1 MGP_129S1SvImJ_G0040155.1 mouse_genomes_project 17 34583074 34583229 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099580.1 MGP_129S1SvImJ_G0037647.1 mouse_genomes_project 17 87798126 87798235 + Gm26066 snRNA snRNA MGP_129S1SvImJ_T0102283.1 MGP_129S1SvImJ_G0040117.1 mouse_genomes_project 17 16301296 16302715 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0046403.1 MGP_129S1SvImJ_G0023408.1 mouse_genomes_project 17 26128718 26157016 + MGP_129S1SvImJ_P0046403 Kifc5b protein_coding protein_coding MGP_129S1SvImJ_T0003753.1 MGP_129S1SvImJ_G0003383.1 mouse_genomes_project 17 27335410 27355614 - Gm15598 antisense antisense MGP_129S1SvImJ_T0011447.1 MGP_129S1SvImJ_G0009563.1 mouse_genomes_project 17 37380851 37381099 + Gm22388 misc_RNA misc_RNA MGP_129S1SvImJ_T0003728.1 MGP_129S1SvImJ_G0003368.1 mouse_genomes_project 17 8056800 8074558 + A230009B12Rik antisense antisense MGP_129S1SvImJ_T0003729.1 MGP_129S1SvImJ_G0003368.1 mouse_genomes_project 17 8056806 8074194 + A230009B12Rik antisense antisense MGP_129S1SvImJ_T0003730.1 MGP_129S1SvImJ_G0003368.1 mouse_genomes_project 17 8056880 8093671 + A230009B12Rik antisense antisense MGP_129S1SvImJ_T0003731.1 MGP_129S1SvImJ_G0003368.1 mouse_genomes_project 17 8065421 8074193 + A230009B12Rik antisense antisense MGP_129S1SvImJ_T0047707.1 MGP_129S1SvImJ_G0023725.1 mouse_genomes_project 17 38190098 38190749 + MGP_129S1SvImJ_P0047707 protein_coding protein_coding MGP_129S1SvImJ_T0048330.1 MGP_129S1SvImJ_G0023947.1 mouse_genomes_project 17 58743837 58744399 - MGP_129S1SvImJ_P0048330 Pspn protein_coding protein_coding MGP_129S1SvImJ_T0011831.1 MGP_129S1SvImJ_G0009938.1 mouse_genomes_project 17 22438878 22443832 - MGP_129S1SvImJ_P0011831 Casp16-ps polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0011832.1 MGP_129S1SvImJ_G0009938.1 mouse_genomes_project 17 22438986 22443754 - MGP_129S1SvImJ_P0011832 Casp16-ps polymorphic_pseudogene protein_coding MGP_129S1SvImJ_T0046342.1 MGP_129S1SvImJ_G0023395.1 mouse_genomes_project 17 25350123 25358384 + Rgs11 protein_coding processed_transcript MGP_129S1SvImJ_T0046343.1 MGP_129S1SvImJ_G0023395.1 mouse_genomes_project 17 25350130 25358388 + MGP_129S1SvImJ_P0046343 Rgs11 protein_coding protein_coding MGP_129S1SvImJ_T0046344.1 MGP_129S1SvImJ_G0023395.1 mouse_genomes_project 17 25350134 25358393 + MGP_129S1SvImJ_P0046344 Rgs11 protein_coding protein_coding MGP_129S1SvImJ_T0046345.1 MGP_129S1SvImJ_G0023395.1 mouse_genomes_project 17 25350135 25351005 + Rgs11 protein_coding retained_intron MGP_129S1SvImJ_T0046346.1 MGP_129S1SvImJ_G0023395.1 mouse_genomes_project 17 25350137 25350808 + Rgs11 protein_coding retained_intron MGP_129S1SvImJ_T0046347.1 MGP_129S1SvImJ_G0023395.1 mouse_genomes_project 17 25350148 25358386 + Rgs11 protein_coding retained_intron MGP_129S1SvImJ_T0046348.1 MGP_129S1SvImJ_G0023395.1 mouse_genomes_project 17 25350152 25351147 + Rgs11 protein_coding retained_intron MGP_129S1SvImJ_T0046349.1 MGP_129S1SvImJ_G0023395.1 mouse_genomes_project 17 25350174 25353952 + Rgs11 protein_coding retained_intron MGP_129S1SvImJ_T0046350.1 MGP_129S1SvImJ_G0023395.1 mouse_genomes_project 17 25350184 25351269 + Rgs11 protein_coding retained_intron MGP_129S1SvImJ_T0046351.1 MGP_129S1SvImJ_G0023395.1 mouse_genomes_project 17 25354599 25358386 + Rgs11 protein_coding retained_intron MGP_129S1SvImJ_T0046352.1 MGP_129S1SvImJ_G0023395.1 mouse_genomes_project 17 25354987 25358384 + Rgs11 protein_coding retained_intron MGP_129S1SvImJ_T0047433.1 MGP_129S1SvImJ_G0023644.1 mouse_genomes_project 17 35723668 35731336 + MGP_129S1SvImJ_P0047433 Cdsn protein_coding protein_coding MGP_129S1SvImJ_T0099555.1 MGP_129S1SvImJ_G0037622.1 mouse_genomes_project 17 33661535 33661611 + Gm22943 snRNA snRNA MGP_129S1SvImJ_T0006978.1 MGP_129S1SvImJ_G0005744.1 mouse_genomes_project 17 55964939 55983209 - 1700025K24Rik lincRNA lincRNA MGP_129S1SvImJ_T0017614.1 MGP_129S1SvImJ_G0015353.1 mouse_genomes_project 17 48266533 48463435 + Trerf1 processed_transcript retained_intron MGP_129S1SvImJ_T0017615.1 MGP_129S1SvImJ_G0015353.1 mouse_genomes_project 17 48266598 48496300 + Trerf1 processed_transcript processed_transcript MGP_129S1SvImJ_T0017616.1 MGP_129S1SvImJ_G0015353.1 mouse_genomes_project 17 48266598 48498751 + Trerf1 processed_transcript processed_transcript MGP_129S1SvImJ_T0017617.1 MGP_129S1SvImJ_G0015353.1 mouse_genomes_project 17 48266872 48452947 + Trerf1 processed_transcript retained_intron MGP_129S1SvImJ_T0017618.1 MGP_129S1SvImJ_G0015353.1 mouse_genomes_project 17 48339169 48452947 + Trerf1 processed_transcript retained_intron MGP_129S1SvImJ_T0017619.1 MGP_129S1SvImJ_G0015353.1 mouse_genomes_project 17 48425844 48496305 + Trerf1 processed_transcript processed_transcript MGP_129S1SvImJ_T0003751.1 MGP_129S1SvImJ_G0003381.1 mouse_genomes_project 17 26955170 26956691 + Gm15420 antisense antisense MGP_129S1SvImJ_T0047648.1 MGP_129S1SvImJ_G0023693.1 mouse_genomes_project 17 37364559 37375342 + MGP_129S1SvImJ_P0047648 Zfp57 protein_coding protein_coding MGP_129S1SvImJ_T0047649.1 MGP_129S1SvImJ_G0023693.1 mouse_genomes_project 17 37367236 37374152 + MGP_129S1SvImJ_P0047649 Zfp57 protein_coding protein_coding MGP_129S1SvImJ_T0047650.1 MGP_129S1SvImJ_G0023693.1 mouse_genomes_project 17 37367279 37375342 + MGP_129S1SvImJ_P0047650 Zfp57 protein_coding protein_coding MGP_129S1SvImJ_T0047651.1 MGP_129S1SvImJ_G0023693.1 mouse_genomes_project 17 37367308 37370793 + MGP_129S1SvImJ_P0047651 Zfp57 protein_coding protein_coding MGP_129S1SvImJ_T0047652.1 MGP_129S1SvImJ_G0023693.1 mouse_genomes_project 17 37367323 37368569 + Zfp57 protein_coding retained_intron MGP_129S1SvImJ_T0047653.1 MGP_129S1SvImJ_G0023693.1 mouse_genomes_project 17 37367331 37368447 + Zfp57 protein_coding retained_intron MGP_129S1SvImJ_T0047654.1 MGP_129S1SvImJ_G0023693.1 mouse_genomes_project 17 37367350 37374533 + MGP_129S1SvImJ_P0047654 Zfp57 protein_coding protein_coding MGP_129S1SvImJ_T0047655.1 MGP_129S1SvImJ_G0023693.1 mouse_genomes_project 17 37367366 37370778 + MGP_129S1SvImJ_P0047655 Zfp57 protein_coding protein_coding MGP_129S1SvImJ_T0047656.1 MGP_129S1SvImJ_G0023693.1 mouse_genomes_project 17 37367424 37374456 + MGP_129S1SvImJ_P0047656 Zfp57 protein_coding protein_coding MGP_129S1SvImJ_T0047657.1 MGP_129S1SvImJ_G0023693.1 mouse_genomes_project 17 37367792 37375345 + MGP_129S1SvImJ_P0047657 Zfp57 protein_coding protein_coding MGP_129S1SvImJ_T0047658.1 MGP_129S1SvImJ_G0023693.1 mouse_genomes_project 17 37368420 37375342 + MGP_129S1SvImJ_P0047658 Zfp57 protein_coding protein_coding MGP_129S1SvImJ_T0047659.1 MGP_129S1SvImJ_G0023693.1 mouse_genomes_project 17 37369276 37374425 + MGP_129S1SvImJ_P0047659 Zfp57 protein_coding protein_coding MGP_129S1SvImJ_T0047660.1 MGP_129S1SvImJ_G0023693.1 mouse_genomes_project 17 37369357 37370960 + Zfp57 protein_coding retained_intron MGP_129S1SvImJ_T0013308.1 MGP_129S1SvImJ_G0011397.1 mouse_genomes_project 17 80459850 80461182 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013283.1 MGP_129S1SvImJ_G0011372.1 mouse_genomes_project 17 54898082 54898676 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0047421.1 MGP_129S1SvImJ_G0023641.1 mouse_genomes_project 17 35681178 35685273 - MGP_129S1SvImJ_P0047421 Tcf19 protein_coding protein_coding MGP_129S1SvImJ_T0047422.1 MGP_129S1SvImJ_G0023641.1 mouse_genomes_project 17 35681181 35685234 - MGP_129S1SvImJ_P0047422 Tcf19 protein_coding protein_coding MGP_129S1SvImJ_T0047423.1 MGP_129S1SvImJ_G0023641.1 mouse_genomes_project 17 35683102 35685269 - MGP_129S1SvImJ_P0047423 Tcf19 protein_coding protein_coding MGP_129S1SvImJ_T0047424.1 MGP_129S1SvImJ_G0023641.1 mouse_genomes_project 17 35683266 35684996 - MGP_129S1SvImJ_P0047424 Tcf19 protein_coding protein_coding MGP_129S1SvImJ_T0047078.1 MGP_129S1SvImJ_G0023563.1 mouse_genomes_project 17 34199888 34203855 + MGP_129S1SvImJ_P0047078 Psmb8 protein_coding protein_coding MGP_129S1SvImJ_T0047079.1 MGP_129S1SvImJ_G0023563.1 mouse_genomes_project 17 34199957 34204392 + MGP_129S1SvImJ_P0047079 Psmb8 protein_coding protein_coding MGP_129S1SvImJ_T0047080.1 MGP_129S1SvImJ_G0023563.1 mouse_genomes_project 17 34200776 34204362 + Psmb8 protein_coding retained_intron MGP_129S1SvImJ_T0047505.1 MGP_129S1SvImJ_G0023658.1 mouse_genomes_project 17 36084568 36098312 + MGP_129S1SvImJ_P0047505 Dhx16 protein_coding protein_coding MGP_129S1SvImJ_T0047506.1 MGP_129S1SvImJ_G0023658.1 mouse_genomes_project 17 36084574 36098267 + MGP_129S1SvImJ_P0047506 Dhx16 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047507.1 MGP_129S1SvImJ_G0023658.1 mouse_genomes_project 17 36092425 36094342 + Dhx16 protein_coding retained_intron MGP_129S1SvImJ_T0047508.1 MGP_129S1SvImJ_G0023658.1 mouse_genomes_project 17 36092683 36093401 + Dhx16 protein_coding retained_intron MGP_129S1SvImJ_T0047509.1 MGP_129S1SvImJ_G0023658.1 mouse_genomes_project 17 36092689 36093489 + Dhx16 protein_coding retained_intron MGP_129S1SvImJ_T0047510.1 MGP_129S1SvImJ_G0023658.1 mouse_genomes_project 17 36092773 36094240 + Dhx16 protein_coding retained_intron MGP_129S1SvImJ_T0047511.1 MGP_129S1SvImJ_G0023658.1 mouse_genomes_project 17 36094028 36098308 + MGP_129S1SvImJ_P0047511 Dhx16 protein_coding protein_coding MGP_129S1SvImJ_T0047512.1 MGP_129S1SvImJ_G0023658.1 mouse_genomes_project 17 36096304 36098195 + Dhx16 protein_coding retained_intron MGP_129S1SvImJ_T0102335.1 MGP_129S1SvImJ_G0040169.1 mouse_genomes_project 17 36445394 36451900 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0046193.1 MGP_129S1SvImJ_G0023360.1 mouse_genomes_project 17 24808390 24810613 + MGP_129S1SvImJ_P0046193 Gng13 protein_coding protein_coding MGP_129S1SvImJ_T0046194.1 MGP_129S1SvImJ_G0023360.1 mouse_genomes_project 17 24808745 24810294 + MGP_129S1SvImJ_P0046194 Gng13 protein_coding protein_coding MGP_129S1SvImJ_T0048559.1 MGP_129S1SvImJ_G0024021.1 mouse_genomes_project 17 76387351 76416376 + MGP_129S1SvImJ_P0048559 Ehd3 protein_coding protein_coding MGP_129S1SvImJ_T0006926.1 MGP_129S1SvImJ_G0005708.1 mouse_genomes_project 17 27061666 27069756 + Gm15458 lincRNA lincRNA MGP_129S1SvImJ_T0001022.1 MGP_129S1SvImJ_G0000951.1 mouse_genomes_project 17 82680391 82695259 - TEC TEC MGP_129S1SvImJ_T0046754.1 MGP_129S1SvImJ_G0023491.1 mouse_genomes_project 17 31365229 31390632 + MGP_129S1SvImJ_P0046754 Pknox1 protein_coding protein_coding MGP_129S1SvImJ_T0046755.1 MGP_129S1SvImJ_G0023491.1 mouse_genomes_project 17 31366977 31392835 + MGP_129S1SvImJ_P0046755 Pknox1 protein_coding protein_coding MGP_129S1SvImJ_T0046756.1 MGP_129S1SvImJ_G0023491.1 mouse_genomes_project 17 31367121 31392831 + MGP_129S1SvImJ_P0046756 Pknox1 protein_coding protein_coding MGP_129S1SvImJ_T0046757.1 MGP_129S1SvImJ_G0023491.1 mouse_genomes_project 17 31376438 31376865 + Pknox1 protein_coding processed_transcript MGP_129S1SvImJ_T0046758.1 MGP_129S1SvImJ_G0023491.1 mouse_genomes_project 17 31379503 31384284 + Pknox1 protein_coding retained_intron MGP_129S1SvImJ_T0046759.1 MGP_129S1SvImJ_G0023491.1 mouse_genomes_project 17 31387888 31388735 + Pknox1 protein_coding retained_intron MGP_129S1SvImJ_T0047677.1 MGP_129S1SvImJ_G0023699.1 mouse_genomes_project 17 37549631 37550533 - MGP_129S1SvImJ_P0047677 protein_coding protein_coding MGP_129S1SvImJ_T0046127.1 MGP_129S1SvImJ_G0023344.1 mouse_genomes_project 17 24272784 24281875 + MGP_129S1SvImJ_P0046127 Gm5819 protein_coding protein_coding MGP_129S1SvImJ_T0045719.1 MGP_129S1SvImJ_G0023218.1 mouse_genomes_project 17 19622114 19623273 - MGP_129S1SvImJ_P0045719 Vmn1r232 protein_coding protein_coding MGP_129S1SvImJ_T0047102.1 MGP_129S1SvImJ_G0023572.1 mouse_genomes_project 17 34387004 34395649 + MGP_129S1SvImJ_P0047102 Btnl1 protein_coding protein_coding MGP_129S1SvImJ_T0003775.1 MGP_129S1SvImJ_G0003398.1 mouse_genomes_project 17 35481861 35485649 - antisense antisense MGP_129S1SvImJ_T0010236.1 MGP_129S1SvImJ_G0008352.1 mouse_genomes_project 17 58113333 58113397 - Mir6977 miRNA miRNA MGP_129S1SvImJ_T0045794.1 MGP_129S1SvImJ_G0023258.1 mouse_genomes_project 17 22501842 22514463 + MGP_129S1SvImJ_P0045794 Zscan10 protein_coding protein_coding MGP_129S1SvImJ_T0045795.1 MGP_129S1SvImJ_G0023258.1 mouse_genomes_project 17 22501842 22514470 + MGP_129S1SvImJ_P0045795 Zscan10 protein_coding protein_coding MGP_129S1SvImJ_T0045796.1 MGP_129S1SvImJ_G0023258.1 mouse_genomes_project 17 22501842 22514463 + MGP_129S1SvImJ_P0045796 Zscan10 protein_coding protein_coding MGP_129S1SvImJ_T0045797.1 MGP_129S1SvImJ_G0023258.1 mouse_genomes_project 17 22501848 22514273 + MGP_129S1SvImJ_P0045797 Zscan10 protein_coding protein_coding MGP_129S1SvImJ_T0045798.1 MGP_129S1SvImJ_G0023258.1 mouse_genomes_project 17 22501848 22514273 + MGP_129S1SvImJ_P0045798 Zscan10 protein_coding protein_coding MGP_129S1SvImJ_T0045799.1 MGP_129S1SvImJ_G0023258.1 mouse_genomes_project 17 22501927 22513152 + MGP_129S1SvImJ_P0045799 Zscan10 protein_coding protein_coding MGP_129S1SvImJ_T0045800.1 MGP_129S1SvImJ_G0023258.1 mouse_genomes_project 17 22508815 22510505 + Zscan10 protein_coding retained_intron MGP_129S1SvImJ_T0045801.1 MGP_129S1SvImJ_G0023258.1 mouse_genomes_project 17 22508839 22513148 + MGP_129S1SvImJ_P0045801 Zscan10 protein_coding protein_coding MGP_129S1SvImJ_T0045802.1 MGP_129S1SvImJ_G0023258.1 mouse_genomes_project 17 22508848 22513148 + MGP_129S1SvImJ_P0045802 Zscan10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045803.1 MGP_129S1SvImJ_G0023258.1 mouse_genomes_project 17 22508848 22513149 + MGP_129S1SvImJ_P0045803 Zscan10 protein_coding protein_coding MGP_129S1SvImJ_T0045804.1 MGP_129S1SvImJ_G0023258.1 mouse_genomes_project 17 22508849 22513149 + MGP_129S1SvImJ_P0045804 Zscan10 protein_coding protein_coding MGP_129S1SvImJ_T0045805.1 MGP_129S1SvImJ_G0023258.1 mouse_genomes_project 17 22510824 22513148 + Zscan10 protein_coding retained_intron MGP_129S1SvImJ_T0047522.1 MGP_129S1SvImJ_G0023660.1 mouse_genomes_project 17 36102972 36115404 - MGP_129S1SvImJ_P0047522 Atat1 protein_coding protein_coding MGP_129S1SvImJ_T0047523.1 MGP_129S1SvImJ_G0023660.1 mouse_genomes_project 17 36102986 36115375 - MGP_129S1SvImJ_P0047523 Atat1 protein_coding protein_coding MGP_129S1SvImJ_T0047524.1 MGP_129S1SvImJ_G0023660.1 mouse_genomes_project 17 36102989 36115386 - MGP_129S1SvImJ_P0047524 Atat1 protein_coding protein_coding MGP_129S1SvImJ_T0047525.1 MGP_129S1SvImJ_G0023660.1 mouse_genomes_project 17 36102992 36103960 - Atat1 protein_coding retained_intron MGP_129S1SvImJ_T0047526.1 MGP_129S1SvImJ_G0023660.1 mouse_genomes_project 17 36103259 36114290 - MGP_129S1SvImJ_P0047526 Atat1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047527.1 MGP_129S1SvImJ_G0023660.1 mouse_genomes_project 17 36105151 36115374 - MGP_129S1SvImJ_P0047527 Atat1 protein_coding protein_coding MGP_129S1SvImJ_T0047528.1 MGP_129S1SvImJ_G0023660.1 mouse_genomes_project 17 36105186 36115374 - MGP_129S1SvImJ_P0047528 Atat1 protein_coding protein_coding MGP_129S1SvImJ_T0047529.1 MGP_129S1SvImJ_G0023660.1 mouse_genomes_project 17 36105829 36109660 - MGP_129S1SvImJ_P0047529 Atat1 protein_coding protein_coding MGP_129S1SvImJ_T0047530.1 MGP_129S1SvImJ_G0023660.1 mouse_genomes_project 17 36106175 36107699 - MGP_129S1SvImJ_P0047530 Atat1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0047531.1 MGP_129S1SvImJ_G0023660.1 mouse_genomes_project 17 36107320 36114764 - Atat1 protein_coding retained_intron MGP_129S1SvImJ_T0047532.1 MGP_129S1SvImJ_G0023660.1 mouse_genomes_project 17 36107337 36114902 - Atat1 protein_coding processed_transcript MGP_129S1SvImJ_T0047533.1 MGP_129S1SvImJ_G0023660.1 mouse_genomes_project 17 36107341 36114368 - Atat1 protein_coding retained_intron MGP_129S1SvImJ_T0047534.1 MGP_129S1SvImJ_G0023660.1 mouse_genomes_project 17 36107374 36114955 - MGP_129S1SvImJ_P0047534 Atat1 protein_coding protein_coding MGP_129S1SvImJ_T0047535.1 MGP_129S1SvImJ_G0023660.1 mouse_genomes_project 17 36108663 36115068 - Atat1 protein_coding retained_intron MGP_129S1SvImJ_T0047536.1 MGP_129S1SvImJ_G0023660.1 mouse_genomes_project 17 36113293 36115374 - Atat1 protein_coding processed_transcript MGP_129S1SvImJ_T0047537.1 MGP_129S1SvImJ_G0023660.1 mouse_genomes_project 17 36113912 36115360 - MGP_129S1SvImJ_P0047537 Atat1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047538.1 MGP_129S1SvImJ_G0023660.1 mouse_genomes_project 17 36114259 36115338 - Atat1 protein_coding retained_intron MGP_129S1SvImJ_T0045948.1 MGP_129S1SvImJ_G0023302.1 mouse_genomes_project 17 23459030 23464550 - MGP_129S1SvImJ_P0045948 Mlst8 protein_coding protein_coding MGP_129S1SvImJ_T0045949.1 MGP_129S1SvImJ_G0023302.1 mouse_genomes_project 17 23459030 23464550 - MGP_129S1SvImJ_P0045949 Mlst8 protein_coding protein_coding MGP_129S1SvImJ_T0047434.1 MGP_129S1SvImJ_G0023645.1 mouse_genomes_project 17 35744016 35745519 + MGP_129S1SvImJ_P0047434 2300002M23Rik protein_coding protein_coding MGP_129S1SvImJ_T0047435.1 MGP_129S1SvImJ_G0023645.1 mouse_genomes_project 17 35744051 35745497 + 2300002M23Rik protein_coding retained_intron MGP_129S1SvImJ_T0045544.1 MGP_129S1SvImJ_G0023146.1 mouse_genomes_project 17 10073039 10166286 - MGP_129S1SvImJ_P0045544 Slc22a3 protein_coding protein_coding MGP_129S1SvImJ_T0013271.1 MGP_129S1SvImJ_G0011360.1 mouse_genomes_project 17 38438920 38442344 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0046232.1 MGP_129S1SvImJ_G0023372.1 mouse_genomes_project 17 24926199 24929173 + MGP_129S1SvImJ_P0046232 Jmjd8 protein_coding protein_coding MGP_129S1SvImJ_T0046233.1 MGP_129S1SvImJ_G0023372.1 mouse_genomes_project 17 24926375 24929175 + MGP_129S1SvImJ_P0046233 Jmjd8 protein_coding protein_coding MGP_129S1SvImJ_T0046234.1 MGP_129S1SvImJ_G0023372.1 mouse_genomes_project 17 24926396 24927483 + Jmjd8 protein_coding retained_intron MGP_129S1SvImJ_T0046235.1 MGP_129S1SvImJ_G0023372.1 mouse_genomes_project 17 24926403 24927958 + MGP_129S1SvImJ_P0046235 Jmjd8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046236.1 MGP_129S1SvImJ_G0023372.1 mouse_genomes_project 17 24926452 24927966 + MGP_129S1SvImJ_P0046236 Jmjd8 protein_coding protein_coding MGP_129S1SvImJ_T0046237.1 MGP_129S1SvImJ_G0023372.1 mouse_genomes_project 17 24926453 24927694 + Jmjd8 protein_coding retained_intron MGP_129S1SvImJ_T0046238.1 MGP_129S1SvImJ_G0023372.1 mouse_genomes_project 17 24926629 24927859 + Jmjd8 protein_coding retained_intron MGP_129S1SvImJ_T0046239.1 MGP_129S1SvImJ_G0023372.1 mouse_genomes_project 17 24927171 24928054 + Jmjd8 protein_coding retained_intron MGP_129S1SvImJ_T0100829.1 MGP_129S1SvImJ_G0038896.1 mouse_genomes_project 17 37191882 37192009 - Gm25973 snoRNA snoRNA MGP_129S1SvImJ_T0048001.1 MGP_129S1SvImJ_G0023836.1 mouse_genomes_project 17 47999652 48000842 - MGP_129S1SvImJ_P0048001 A330017A19Rik protein_coding protein_coding MGP_129S1SvImJ_T0100815.1 MGP_129S1SvImJ_G0038882.1 mouse_genomes_project 17 9946054 9946194 + Gm24794 snoRNA snoRNA MGP_129S1SvImJ_T0006950.1 MGP_129S1SvImJ_G0005727.1 mouse_genomes_project 17 35309359 35311427 + Gm17705 lincRNA lincRNA MGP_129S1SvImJ_T0047338.1 MGP_129S1SvImJ_G0023619.1 mouse_genomes_project 17 35257363 35262587 - MGP_129S1SvImJ_P0047338 Csnk2b protein_coding protein_coding MGP_129S1SvImJ_T0047339.1 MGP_129S1SvImJ_G0023619.1 mouse_genomes_project 17 35257365 35262444 - MGP_129S1SvImJ_P0047339 Csnk2b protein_coding protein_coding MGP_129S1SvImJ_T0047340.1 MGP_129S1SvImJ_G0023619.1 mouse_genomes_project 17 35257365 35260933 - MGP_129S1SvImJ_P0047340 Csnk2b protein_coding protein_coding MGP_129S1SvImJ_T0047341.1 MGP_129S1SvImJ_G0023619.1 mouse_genomes_project 17 35257367 35262331 - MGP_129S1SvImJ_P0047341 Csnk2b protein_coding protein_coding MGP_129S1SvImJ_T0047342.1 MGP_129S1SvImJ_G0023619.1 mouse_genomes_project 17 35257409 35259230 - MGP_129S1SvImJ_P0047342 Csnk2b protein_coding protein_coding MGP_129S1SvImJ_T0047343.1 MGP_129S1SvImJ_G0023619.1 mouse_genomes_project 17 35258852 35259939 - Csnk2b protein_coding retained_intron MGP_129S1SvImJ_T0047344.1 MGP_129S1SvImJ_G0023619.1 mouse_genomes_project 17 35258853 35263211 - MGP_129S1SvImJ_P0047344 Csnk2b protein_coding protein_coding MGP_129S1SvImJ_T0047345.1 MGP_129S1SvImJ_G0023619.1 mouse_genomes_project 17 35259152 35262188 - MGP_129S1SvImJ_P0047345 Csnk2b protein_coding protein_coding MGP_129S1SvImJ_T0047346.1 MGP_129S1SvImJ_G0023619.1 mouse_genomes_project 17 35260911 35263156 - MGP_129S1SvImJ_P0047346 Csnk2b protein_coding protein_coding MGP_129S1SvImJ_T0047347.1 MGP_129S1SvImJ_G0023619.1 mouse_genomes_project 17 35261675 35262594 - Csnk2b protein_coding retained_intron MGP_129S1SvImJ_T0048257.1 MGP_129S1SvImJ_G0023919.1 mouse_genomes_project 17 57923770 57930693 + MGP_129S1SvImJ_P0048257 protein_coding protein_coding MGP_129S1SvImJ_T0046862.1 MGP_129S1SvImJ_G0023519.1 mouse_genomes_project 17 32912695 32930721 - MGP_129S1SvImJ_P0046862 Zfp763 protein_coding protein_coding MGP_129S1SvImJ_T0046863.1 MGP_129S1SvImJ_G0023519.1 mouse_genomes_project 17 32915591 32930487 - Zfp763 protein_coding processed_transcript MGP_129S1SvImJ_T0013272.1 MGP_129S1SvImJ_G0011361.1 mouse_genomes_project 17 38444579 38444953 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013281.1 MGP_129S1SvImJ_G0011370.1 mouse_genomes_project 17 49191316 49191673 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0047780.1 MGP_129S1SvImJ_G0023777.1 mouse_genomes_project 17 44515325 44530235 - MGP_129S1SvImJ_P0047780 Tdrd6 protein_coding protein_coding MGP_129S1SvImJ_T0047781.1 MGP_129S1SvImJ_G0023777.1 mouse_genomes_project 17 44515329 44530235 - MGP_129S1SvImJ_P0047781 Tdrd6 protein_coding protein_coding MGP_129S1SvImJ_T0047782.1 MGP_129S1SvImJ_G0023777.1 mouse_genomes_project 17 44515549 44520474 - Tdrd6 protein_coding processed_transcript MGP_129S1SvImJ_T0047783.1 MGP_129S1SvImJ_G0023777.1 mouse_genomes_project 17 44515835 44530118 - MGP_129S1SvImJ_P0047783 Tdrd6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0047436.1 MGP_129S1SvImJ_G0023646.1 mouse_genomes_project 17 35780909 35834324 + MGP_129S1SvImJ_P0047436 Sfta2 protein_coding protein_coding MGP_129S1SvImJ_T0047437.1 MGP_129S1SvImJ_G0023646.1 mouse_genomes_project 17 35780938 35834322 + Sfta2 protein_coding processed_transcript MGP_129S1SvImJ_T0047440.1 MGP_129S1SvImJ_G0023646.1 mouse_genomes_project 17 35833464 35834328 + MGP_129S1SvImJ_P0047440 Sfta2 protein_coding protein_coding MGP_129S1SvImJ_T0048210.1 MGP_129S1SvImJ_G0023895.1 mouse_genomes_project 17 57075906 57113848 + MGP_129S1SvImJ_P0048210 St6gal2 protein_coding protein_coding MGP_129S1SvImJ_T0048211.1 MGP_129S1SvImJ_G0023895.1 mouse_genomes_project 17 57075913 57129253 + MGP_129S1SvImJ_P0048211 St6gal2 protein_coding protein_coding MGP_129S1SvImJ_T0048212.1 MGP_129S1SvImJ_G0023895.1 mouse_genomes_project 17 57076074 57145442 + MGP_129S1SvImJ_P0048212 St6gal2 protein_coding protein_coding MGP_129S1SvImJ_T0048213.1 MGP_129S1SvImJ_G0023895.1 mouse_genomes_project 17 57076770 57113184 + St6gal2 protein_coding processed_transcript MGP_129S1SvImJ_T0013256.1 MGP_129S1SvImJ_G0011345.1 mouse_genomes_project 17 36145206 36145533 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0046715.1 MGP_129S1SvImJ_G0023484.1 mouse_genomes_project 17 30918943 30937495 - MGP_129S1SvImJ_P0046715 Tmprss3 protein_coding protein_coding MGP_129S1SvImJ_T0046716.1 MGP_129S1SvImJ_G0023484.1 mouse_genomes_project 17 30918943 30938702 - MGP_129S1SvImJ_P0046716 Tmprss3 protein_coding protein_coding MGP_129S1SvImJ_T0003798.1 MGP_129S1SvImJ_G0003416.1 mouse_genomes_project 17 54118120 54129137 - Gm27217 antisense antisense MGP_129S1SvImJ_T0102309.1 MGP_129S1SvImJ_G0040143.1 mouse_genomes_project 17 22166887 22193210 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0045465.1 MGP_129S1SvImJ_G0023121.1 mouse_genomes_project 17 5185749 5238253 + MGP_129S1SvImJ_P0045465 protein_coding protein_coding MGP_129S1SvImJ_T0048547.1 MGP_129S1SvImJ_G0024015.1 mouse_genomes_project 17 74348367 75118860 - MGP_129S1SvImJ_P0048547 Alk protein_coding protein_coding MGP_129S1SvImJ_T0047760.1 MGP_129S1SvImJ_G0023768.1 mouse_genomes_project 17 43505421 43544365 - MGP_129S1SvImJ_P0047760 Adgrf4 protein_coding protein_coding MGP_129S1SvImJ_T0047761.1 MGP_129S1SvImJ_G0023768.1 mouse_genomes_project 17 43505424 43544365 - MGP_129S1SvImJ_P0047761 Adgrf4 protein_coding protein_coding MGP_129S1SvImJ_T0047762.1 MGP_129S1SvImJ_G0023768.1 mouse_genomes_project 17 43505620 43544343 - MGP_129S1SvImJ_P0047762 Adgrf4 protein_coding protein_coding MGP_129S1SvImJ_T0047763.1 MGP_129S1SvImJ_G0023768.1 mouse_genomes_project 17 43522726 43544354 - MGP_129S1SvImJ_P0047763 Adgrf4 protein_coding protein_coding MGP_129S1SvImJ_T0047265.1 MGP_129S1SvImJ_G0023603.1 mouse_genomes_project 17 35103188 35110089 + MGP_129S1SvImJ_P0047265 Hspa1l protein_coding protein_coding MGP_129S1SvImJ_T0046438.1 MGP_129S1SvImJ_G0023420.1 mouse_genomes_project 17 26716912 26800705 - MGP_129S1SvImJ_P0046438 Grm4 protein_coding protein_coding MGP_129S1SvImJ_T0046439.1 MGP_129S1SvImJ_G0023420.1 mouse_genomes_project 17 26720432 26813153 - MGP_129S1SvImJ_P0046439 Grm4 protein_coding protein_coding MGP_129S1SvImJ_T0046440.1 MGP_129S1SvImJ_G0023420.1 mouse_genomes_project 17 26744689 26767453 - Grm4 protein_coding retained_intron MGP_129S1SvImJ_T0046441.1 MGP_129S1SvImJ_G0023420.1 mouse_genomes_project 17 26746161 26767204 - Grm4 protein_coding processed_transcript MGP_129S1SvImJ_T0045863.1 MGP_129S1SvImJ_G0023281.1 mouse_genomes_project 17 22877007 22881147 + MGP_129S1SvImJ_P0045863 Sbp protein_coding protein_coding MGP_129S1SvImJ_T0045864.1 MGP_129S1SvImJ_G0023281.1 mouse_genomes_project 17 22877168 22881151 + MGP_129S1SvImJ_P0045864 Sbp protein_coding protein_coding MGP_129S1SvImJ_T0045865.1 MGP_129S1SvImJ_G0023281.1 mouse_genomes_project 17 22877239 22881147 + MGP_129S1SvImJ_P0045865 Sbp protein_coding protein_coding MGP_129S1SvImJ_T0045866.1 MGP_129S1SvImJ_G0023281.1 mouse_genomes_project 17 22877307 22880777 + MGP_129S1SvImJ_P0045866 Sbp protein_coding protein_coding MGP_129S1SvImJ_T0045867.1 MGP_129S1SvImJ_G0023281.1 mouse_genomes_project 17 22877399 22881143 + MGP_129S1SvImJ_P0045867 Sbp protein_coding protein_coding MGP_129S1SvImJ_T0045868.1 MGP_129S1SvImJ_G0023281.1 mouse_genomes_project 17 22877697 22881151 + MGP_129S1SvImJ_P0045868 Sbp protein_coding protein_coding MGP_129S1SvImJ_T0045869.1 MGP_129S1SvImJ_G0023281.1 mouse_genomes_project 17 22877705 22881147 + MGP_129S1SvImJ_P0045869 Sbp protein_coding protein_coding MGP_129S1SvImJ_T0003776.1 MGP_129S1SvImJ_G0003399.1 mouse_genomes_project 17 35835584 35845569 + Gm20483 antisense antisense MGP_129S1SvImJ_T0047736.1 MGP_129S1SvImJ_G0023748.1 mouse_genomes_project 17 39843891 40212330 + MGP_129S1SvImJ_P0047736 protein_coding protein_coding MGP_129S1SvImJ_T0003789.1 MGP_129S1SvImJ_G0003409.1 mouse_genomes_project 17 45710009 45711781 + Runx2os1 antisense antisense MGP_129S1SvImJ_T0046353.1 MGP_129S1SvImJ_G0023396.1 mouse_genomes_project 17 25358869 25392221 - MGP_129S1SvImJ_P0046353 Fam234a protein_coding protein_coding MGP_129S1SvImJ_T0046354.1 MGP_129S1SvImJ_G0023396.1 mouse_genomes_project 17 25359760 25392140 - MGP_129S1SvImJ_P0046354 Fam234a protein_coding protein_coding MGP_129S1SvImJ_T0046355.1 MGP_129S1SvImJ_G0023396.1 mouse_genomes_project 17 25359765 25392173 - MGP_129S1SvImJ_P0046355 Fam234a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0046356.1 MGP_129S1SvImJ_G0023396.1 mouse_genomes_project 17 25360591 25363322 - MGP_129S1SvImJ_P0046356 Fam234a protein_coding protein_coding MGP_129S1SvImJ_T0046357.1 MGP_129S1SvImJ_G0023396.1 mouse_genomes_project 17 25362294 25364044 - Fam234a protein_coding retained_intron MGP_129S1SvImJ_T0046358.1 MGP_129S1SvImJ_G0023396.1 mouse_genomes_project 17 25365369 25367672 - MGP_129S1SvImJ_P0046358 Fam234a protein_coding protein_coding MGP_129S1SvImJ_T0047856.1 MGP_129S1SvImJ_G0023796.1 mouse_genomes_project 17 46655785 46683464 - MGP_129S1SvImJ_P0047856 Capn11 protein_coding protein_coding MGP_129S1SvImJ_T0047857.1 MGP_129S1SvImJ_G0023796.1 mouse_genomes_project 17 46672330 46683436 - MGP_129S1SvImJ_P0047857 Capn11 protein_coding non_stop_decay MGP_129S1SvImJ_T0045935.1 MGP_129S1SvImJ_G0023297.1 mouse_genomes_project 17 23395670 23406710 + MGP_129S1SvImJ_P0045935 Rnps1 protein_coding protein_coding MGP_129S1SvImJ_T0045936.1 MGP_129S1SvImJ_G0023297.1 mouse_genomes_project 17 23395670 23406710 + MGP_129S1SvImJ_P0045936 Rnps1 protein_coding protein_coding MGP_129S1SvImJ_T0045937.1 MGP_129S1SvImJ_G0023297.1 mouse_genomes_project 17 23395670 23406710 + MGP_129S1SvImJ_P0045937 Rnps1 protein_coding protein_coding MGP_129S1SvImJ_T0010226.1 MGP_129S1SvImJ_G0008342.1 mouse_genomes_project 17 35404417 35404534 + Mir8094 miRNA miRNA MGP_129S1SvImJ_T0046710.1 MGP_129S1SvImJ_G0023480.1 mouse_genomes_project 17 30785445 30846598 + MGP_129S1SvImJ_P0046710 Abcg1 protein_coding protein_coding MGP_129S1SvImJ_T0046711.1 MGP_129S1SvImJ_G0023480.1 mouse_genomes_project 17 30785521 30829599 + Abcg1 protein_coding retained_intron MGP_129S1SvImJ_T0047744.1 MGP_129S1SvImJ_G0023756.1 mouse_genomes_project 17 41375338 41394720 + MGP_129S1SvImJ_P0047744 Gm44501 protein_coding protein_coding MGP_129S1SvImJ_T0047098.1 MGP_129S1SvImJ_G0023569.1 mouse_genomes_project 17 34313185 34324124 + MGP_129S1SvImJ_P0047098 H2-Eb1 protein_coding protein_coding MGP_129S1SvImJ_T0010215.1 MGP_129S1SvImJ_G0008331.1 mouse_genomes_project 17 30686309 30686407 + Gm24026 miRNA miRNA MGP_129S1SvImJ_T0013280.1 MGP_129S1SvImJ_G0011369.1 mouse_genomes_project 17 48823063 48824632 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048723.1 MGP_129S1SvImJ_G0024087.1 mouse_genomes_project 17 88307885 88698890 + MGP_129S1SvImJ_P0048723 Camkmt protein_coding protein_coding MGP_129S1SvImJ_T0045755.1 MGP_129S1SvImJ_G0023240.1 mouse_genomes_project 17 20634361 20950854 - MGP_129S1SvImJ_P0045755 Zfp995 protein_coding protein_coding MGP_129S1SvImJ_T0045765.1 MGP_129S1SvImJ_G0023240.1 mouse_genomes_project 17 20848843 20862636 - MGP_129S1SvImJ_P0045765 Zfp995 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0045469.1 MGP_129S1SvImJ_G0023124.1 mouse_genomes_project 17 5235466 5238299 + MGP_129S1SvImJ_P0045469 protein_coding protein_coding MGP_129S1SvImJ_T0010239.1 MGP_129S1SvImJ_G0008355.1 mouse_genomes_project 17 66394649 66394739 - Gm24194 miRNA miRNA MGP_129S1SvImJ_T0047714.1 MGP_129S1SvImJ_G0023732.1 mouse_genomes_project 17 38404849 38405728 + MGP_129S1SvImJ_P0047714 Olfr127 protein_coding protein_coding MGP_129S1SvImJ_T0013288.1 MGP_129S1SvImJ_G0011377.1 mouse_genomes_project 17 55475791 55476137 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048138.1 MGP_129S1SvImJ_G0023872.1 mouse_genomes_project 17 49702367 49710169 + MGP_129S1SvImJ_P0048138 Oard1 protein_coding protein_coding MGP_129S1SvImJ_T0048139.1 MGP_129S1SvImJ_G0023872.1 mouse_genomes_project 17 49702433 49710181 + MGP_129S1SvImJ_P0048139 Oard1 protein_coding protein_coding MGP_129S1SvImJ_T0003787.1 MGP_129S1SvImJ_G0003407.1 mouse_genomes_project 17 45524692 45525873 + Runx2os3 antisense antisense MGP_129S1SvImJ_T0048019.1 MGP_129S1SvImJ_G0023842.1 mouse_genomes_project 17 48524921 48532459 + MGP_129S1SvImJ_P0048019 Guca1b protein_coding protein_coding MGP_129S1SvImJ_T0048020.1 MGP_129S1SvImJ_G0023842.1 mouse_genomes_project 17 48524932 48531585 + MGP_129S1SvImJ_P0048020 Guca1b protein_coding protein_coding MGP_129S1SvImJ_T0048107.1 MGP_129S1SvImJ_G0023864.1 mouse_genomes_project 17 49500946 49514524 + MGP_129S1SvImJ_P0048107 Trem1 protein_coding protein_coding MGP_129S1SvImJ_T0048108.1 MGP_129S1SvImJ_G0023864.1 mouse_genomes_project 17 49500949 49515074 + MGP_129S1SvImJ_P0048108 Trem1 protein_coding protein_coding MGP_129S1SvImJ_T0003727.1 MGP_129S1SvImJ_G0003367.1 mouse_genomes_project 17 5144338 5197696 - antisense antisense MGP_129S1SvImJ_T0048560.1 MGP_129S1SvImJ_G0024022.1 mouse_genomes_project 17 76467972 76538495 - MGP_129S1SvImJ_P0048560 Xdh protein_coding protein_coding MGP_129S1SvImJ_T0047590.1 MGP_129S1SvImJ_G0023673.1 mouse_genomes_project 17 36613124 36622979 - MGP_129S1SvImJ_P0047590 Trim39 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047591.1 MGP_129S1SvImJ_G0023673.1 mouse_genomes_project 17 36613124 36626235 - MGP_129S1SvImJ_P0047591 Trim39 protein_coding protein_coding MGP_129S1SvImJ_T0047592.1 MGP_129S1SvImJ_G0023673.1 mouse_genomes_project 17 36613124 36625798 - MGP_129S1SvImJ_P0047592 Trim39 protein_coding protein_coding MGP_129S1SvImJ_T0047593.1 MGP_129S1SvImJ_G0023673.1 mouse_genomes_project 17 36613361 36623447 - MGP_129S1SvImJ_P0047593 Trim39 protein_coding protein_coding MGP_129S1SvImJ_T0047594.1 MGP_129S1SvImJ_G0023673.1 mouse_genomes_project 17 36615783 36622922 - Trim39 protein_coding processed_transcript MGP_129S1SvImJ_T0047595.1 MGP_129S1SvImJ_G0023673.1 mouse_genomes_project 17 36616863 36625614 - Trim39 protein_coding processed_transcript MGP_129S1SvImJ_T0047596.1 MGP_129S1SvImJ_G0023673.1 mouse_genomes_project 17 36616865 36626478 - Trim39 protein_coding retained_intron MGP_129S1SvImJ_T0048348.1 MGP_129S1SvImJ_G0023955.1 mouse_genomes_project 17 58850210 58866046 - MGP_129S1SvImJ_P0048348 protein_coding protein_coding MGP_129S1SvImJ_T0048253.1 MGP_129S1SvImJ_G0023917.1 mouse_genomes_project 17 57830287 57838217 - MGP_129S1SvImJ_P0048253 Mydgf protein_coding protein_coding MGP_129S1SvImJ_T0048254.1 MGP_129S1SvImJ_G0023917.1 mouse_genomes_project 17 57832661 57838146 - Mydgf protein_coding retained_intron MGP_129S1SvImJ_T0048255.1 MGP_129S1SvImJ_G0023917.1 mouse_genomes_project 17 57833682 57837961 - Mydgf protein_coding processed_transcript MGP_129S1SvImJ_T0017577.1 MGP_129S1SvImJ_G0015339.1 mouse_genomes_project 17 19437030 19438056 + Vmn1r227 processed_transcript pseudogene MGP_129S1SvImJ_T0048544.1 MGP_129S1SvImJ_G0024013.1 mouse_genomes_project 17 74221215 74230596 - MGP_129S1SvImJ_P0048544 BC027072 protein_coding protein_coding MGP_129S1SvImJ_T0003807.1 MGP_129S1SvImJ_G0003423.1 mouse_genomes_project 17 74191358 74192327 - Gm15641 antisense antisense MGP_129S1SvImJ_T0048834.1 MGP_129S1SvImJ_G0024116.1 mouse_genomes_project 17 94696687 94697586 + MGP_129S1SvImJ_P0048834 Gm10308 protein_coding protein_coding MGP_129S1SvImJ_T0100819.1 MGP_129S1SvImJ_G0038886.1 mouse_genomes_project 17 23519946 23520024 + Snord60 snoRNA snoRNA MGP_129S1SvImJ_T0045830.1 MGP_129S1SvImJ_G0023269.1 mouse_genomes_project 17 22658135 22662776 - MGP_129S1SvImJ_P0045830 Kremen2 protein_coding protein_coding MGP_129S1SvImJ_T0045831.1 MGP_129S1SvImJ_G0023270.1 mouse_genomes_project 17 22670799 22681245 - MGP_129S1SvImJ_P0045831 Flywch1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0045832.1 MGP_129S1SvImJ_G0023270.1 mouse_genomes_project 17 22673437 22690292 - MGP_129S1SvImJ_P0045832 Flywch1 protein_coding protein_coding MGP_129S1SvImJ_T0045833.1 MGP_129S1SvImJ_G0023270.1 mouse_genomes_project 17 22673446 22681802 - MGP_129S1SvImJ_P0045833 Flywch1 protein_coding protein_coding MGP_129S1SvImJ_T0099562.1 MGP_129S1SvImJ_G0037629.1 mouse_genomes_project 17 44338467 44338610 + Gm25135 snRNA snRNA MGP_129S1SvImJ_T0045754.1 MGP_129S1SvImJ_G0023239.1 mouse_genomes_project 17 20634191 20682497 - MGP_129S1SvImJ_P0045754 protein_coding protein_coding MGP_129S1SvImJ_T0045756.1 MGP_129S1SvImJ_G0023239.1 mouse_genomes_project 17 20664883 20682210 - protein_coding processed_transcript MGP_129S1SvImJ_T0045757.1 MGP_129S1SvImJ_G0023239.1 mouse_genomes_project 17 20680606 20682496 - protein_coding retained_intron MGP_129S1SvImJ_T0047756.1 MGP_129S1SvImJ_G0023764.1 mouse_genomes_project 17 41737176 41749888 - MGP_129S1SvImJ_P0047756 Cenpq protein_coding protein_coding MGP_129S1SvImJ_T0003777.1 MGP_129S1SvImJ_G0003400.1 mouse_genomes_project 17 35888465 35892897 + Gm4577 antisense antisense MGP_129S1SvImJ_T0048193.1 MGP_129S1SvImJ_G0023886.1 mouse_genomes_project 17 54946018 55016316 - MGP_129S1SvImJ_P0048193 Efhb protein_coding protein_coding MGP_129S1SvImJ_T0048615.1 MGP_129S1SvImJ_G0024039.1 mouse_genomes_project 17 81482639 81573815 - MGP_129S1SvImJ_P0048615 Strn protein_coding protein_coding MGP_129S1SvImJ_T0048616.1 MGP_129S1SvImJ_G0024039.1 mouse_genomes_project 17 81498318 81516445 - MGP_129S1SvImJ_P0048616 Strn protein_coding protein_coding MGP_129S1SvImJ_T0048666.1 MGP_129S1SvImJ_G0024062.1 mouse_genomes_project 17 83221975 83303206 + MGP_129S1SvImJ_P0048666 Arhgef33 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048667.1 MGP_129S1SvImJ_G0024062.1 mouse_genomes_project 17 83222100 83307567 + MGP_129S1SvImJ_P0048667 Arhgef33 protein_coding protein_coding MGP_129S1SvImJ_T0048294.1 MGP_129S1SvImJ_G0023929.1 mouse_genomes_project 17 58288077 58299760 + Safb protein_coding retained_intron MGP_129S1SvImJ_T0048295.1 MGP_129S1SvImJ_G0023929.1 mouse_genomes_project 17 58288226 58309344 + MGP_129S1SvImJ_P0048295 Safb protein_coding protein_coding MGP_129S1SvImJ_T0048296.1 MGP_129S1SvImJ_G0023929.1 mouse_genomes_project 17 58288234 58296973 + MGP_129S1SvImJ_P0048296 Safb protein_coding protein_coding MGP_129S1SvImJ_T0048297.1 MGP_129S1SvImJ_G0023929.1 mouse_genomes_project 17 58288311 58309424 + MGP_129S1SvImJ_P0048297 Safb protein_coding protein_coding MGP_129S1SvImJ_T0048298.1 MGP_129S1SvImJ_G0023929.1 mouse_genomes_project 17 58292088 58304422 + MGP_129S1SvImJ_P0048298 Safb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048299.1 MGP_129S1SvImJ_G0023929.1 mouse_genomes_project 17 58297728 58299748 + Safb protein_coding retained_intron MGP_129S1SvImJ_T0048300.1 MGP_129S1SvImJ_G0023929.1 mouse_genomes_project 17 58300999 58309410 + Safb protein_coding retained_intron MGP_129S1SvImJ_T0048301.1 MGP_129S1SvImJ_G0023929.1 mouse_genomes_project 17 58304578 58307545 + Safb protein_coding retained_intron MGP_129S1SvImJ_T0048302.1 MGP_129S1SvImJ_G0023929.1 mouse_genomes_project 17 58306106 58307680 + Safb protein_coding retained_intron MGP_129S1SvImJ_T0048303.1 MGP_129S1SvImJ_G0023929.1 mouse_genomes_project 17 58307495 58308778 + Safb protein_coding retained_intron MGP_129S1SvImJ_T0048304.1 MGP_129S1SvImJ_G0023929.1 mouse_genomes_project 17 58308358 58309424 + Safb protein_coding retained_intron MGP_129S1SvImJ_T0048305.1 MGP_129S1SvImJ_G0023929.1 mouse_genomes_project 17 58308864 58309404 + Safb protein_coding retained_intron MGP_129S1SvImJ_T0006989.1 MGP_129S1SvImJ_G0005751.1 mouse_genomes_project 17 73288205 73289790 - Gm26510 lincRNA lincRNA MGP_129S1SvImJ_T0006990.1 MGP_129S1SvImJ_G0005751.1 mouse_genomes_project 17 73288208 73342398 - Gm26510 lincRNA lincRNA MGP_129S1SvImJ_T0048021.1 MGP_129S1SvImJ_G0023843.1 mouse_genomes_project 17 48536644 48542629 - MGP_129S1SvImJ_P0048021 Guca1a protein_coding protein_coding MGP_129S1SvImJ_T0047690.1 MGP_129S1SvImJ_G0023711.1 mouse_genomes_project 17 37803655 37804688 + MGP_129S1SvImJ_P0047690 Olfr107 protein_coding protein_coding MGP_129S1SvImJ_T0047871.1 MGP_129S1SvImJ_G0023800.1 mouse_genomes_project 17 47059016 47073832 - MGP_129S1SvImJ_P0047871 protein_coding protein_coding MGP_129S1SvImJ_T0047872.1 MGP_129S1SvImJ_G0023800.1 mouse_genomes_project 17 47059016 47074386 - MGP_129S1SvImJ_P0047872 protein_coding protein_coding MGP_129S1SvImJ_T0047873.1 MGP_129S1SvImJ_G0023800.1 mouse_genomes_project 17 47059019 47074394 - MGP_129S1SvImJ_P0047873 protein_coding protein_coding MGP_129S1SvImJ_T0047874.1 MGP_129S1SvImJ_G0023800.1 mouse_genomes_project 17 47060491 47066877 - protein_coding retained_intron MGP_129S1SvImJ_T0047875.1 MGP_129S1SvImJ_G0023800.1 mouse_genomes_project 17 47060555 47074386 - MGP_129S1SvImJ_P0047875 protein_coding protein_coding MGP_129S1SvImJ_T0047876.1 MGP_129S1SvImJ_G0023800.1 mouse_genomes_project 17 47060618 47066894 - protein_coding retained_intron MGP_129S1SvImJ_T0047877.1 MGP_129S1SvImJ_G0023800.1 mouse_genomes_project 17 47060724 47063385 - protein_coding retained_intron MGP_129S1SvImJ_T0047878.1 MGP_129S1SvImJ_G0023800.1 mouse_genomes_project 17 47060843 47073373 - MGP_129S1SvImJ_P0047878 protein_coding protein_coding MGP_129S1SvImJ_T0047879.1 MGP_129S1SvImJ_G0023800.1 mouse_genomes_project 17 47060845 47066815 - protein_coding retained_intron MGP_129S1SvImJ_T0047880.1 MGP_129S1SvImJ_G0023800.1 mouse_genomes_project 17 47060870 47073373 - MGP_129S1SvImJ_P0047880 protein_coding protein_coding MGP_129S1SvImJ_T0047881.1 MGP_129S1SvImJ_G0023800.1 mouse_genomes_project 17 47067208 47073373 - protein_coding retained_intron MGP_129S1SvImJ_T0045466.1 MGP_129S1SvImJ_G0023122.1 mouse_genomes_project 17 5196976 5230944 + MGP_129S1SvImJ_P0045466 protein_coding protein_coding MGP_129S1SvImJ_T0010194.1 MGP_129S1SvImJ_G0008310.1 mouse_genomes_project 17 22955860 22955941 + Gm27700 miRNA miRNA MGP_129S1SvImJ_T0006912.1 MGP_129S1SvImJ_G0005696.1 mouse_genomes_project 17 20222211 20225913 - Gm26753 lincRNA lincRNA MGP_129S1SvImJ_T0046645.1 MGP_129S1SvImJ_G0023463.1 mouse_genomes_project 17 28857543 28875060 - MGP_129S1SvImJ_P0046645 Mtch1 protein_coding protein_coding MGP_129S1SvImJ_T0046646.1 MGP_129S1SvImJ_G0023463.1 mouse_genomes_project 17 28857547 28875060 - MGP_129S1SvImJ_P0046646 Mtch1 protein_coding protein_coding MGP_129S1SvImJ_T0046647.1 MGP_129S1SvImJ_G0023463.1 mouse_genomes_project 17 28857585 28859477 - Mtch1 protein_coding processed_transcript MGP_129S1SvImJ_T0046648.1 MGP_129S1SvImJ_G0023463.1 mouse_genomes_project 17 28859190 28859579 - Mtch1 protein_coding processed_transcript MGP_129S1SvImJ_T0046649.1 MGP_129S1SvImJ_G0023463.1 mouse_genomes_project 17 28860635 28865446 - Mtch1 protein_coding retained_intron MGP_129S1SvImJ_T0046650.1 MGP_129S1SvImJ_G0023463.1 mouse_genomes_project 17 28864824 28874327 - MGP_129S1SvImJ_P0046650 Mtch1 protein_coding protein_coding MGP_129S1SvImJ_T0046651.1 MGP_129S1SvImJ_G0023463.1 mouse_genomes_project 17 28865785 28867920 - Mtch1 protein_coding retained_intron MGP_129S1SvImJ_T0006941.1 MGP_129S1SvImJ_G0005718.1 mouse_genomes_project 17 32120477 32139467 + Gm26549 lincRNA lincRNA MGP_129S1SvImJ_T0102307.1 MGP_129S1SvImJ_G0040141.1 mouse_genomes_project 17 22025983 22026570 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0046541.1 MGP_129S1SvImJ_G0023440.1 mouse_genomes_project 17 27743427 27746979 - Tulp1 protein_coding retained_intron MGP_129S1SvImJ_T0046542.1 MGP_129S1SvImJ_G0023440.1 mouse_genomes_project 17 27743427 27757045 - MGP_129S1SvImJ_P0046542 Tulp1 protein_coding protein_coding MGP_129S1SvImJ_T0046543.1 MGP_129S1SvImJ_G0023440.1 mouse_genomes_project 17 27743428 27750586 - MGP_129S1SvImJ_P0046543 Tulp1 protein_coding protein_coding MGP_129S1SvImJ_T0046544.1 MGP_129S1SvImJ_G0023440.1 mouse_genomes_project 17 27743766 27750554 - MGP_129S1SvImJ_P0046544 Tulp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046545.1 MGP_129S1SvImJ_G0023440.1 mouse_genomes_project 17 27744442 27754817 - Tulp1 protein_coding retained_intron MGP_129S1SvImJ_T0046546.1 MGP_129S1SvImJ_G0023440.1 mouse_genomes_project 17 27744450 27748289 - Tulp1 protein_coding retained_intron MGP_129S1SvImJ_T0046547.1 MGP_129S1SvImJ_G0023440.1 mouse_genomes_project 17 27744974 27751121 - MGP_129S1SvImJ_P0046547 Tulp1 protein_coding protein_coding MGP_129S1SvImJ_T0046548.1 MGP_129S1SvImJ_G0023440.1 mouse_genomes_project 17 27747729 27757079 - MGP_129S1SvImJ_P0046548 Tulp1 protein_coding protein_coding MGP_129S1SvImJ_T0046549.1 MGP_129S1SvImJ_G0023440.1 mouse_genomes_project 17 27750341 27754329 - Tulp1 protein_coding retained_intron MGP_129S1SvImJ_T0046550.1 MGP_129S1SvImJ_G0023440.1 mouse_genomes_project 17 27753543 27754854 - Tulp1 protein_coding retained_intron MGP_129S1SvImJ_T0046551.1 MGP_129S1SvImJ_G0023440.1 mouse_genomes_project 17 27754591 27757043 - Tulp1 protein_coding retained_intron MGP_129S1SvImJ_T0046552.1 MGP_129S1SvImJ_G0023440.1 mouse_genomes_project 17 27755582 27757036 - Tulp1 protein_coding retained_intron MGP_129S1SvImJ_T0010224.1 MGP_129S1SvImJ_G0008340.1 mouse_genomes_project 17 35354349 35354432 - Mir6974 miRNA miRNA MGP_129S1SvImJ_T0047729.1 MGP_129S1SvImJ_G0023741.1 mouse_genomes_project 17 38869203 38870142 + MGP_129S1SvImJ_P0047729 Olfr136 protein_coding protein_coding MGP_129S1SvImJ_T0006948.1 MGP_129S1SvImJ_G0005725.1 mouse_genomes_project 17 34299522 34313029 - Gm20513 lincRNA lincRNA MGP_129S1SvImJ_T0003783.1 MGP_129S1SvImJ_G0003406.1 mouse_genomes_project 17 44486138 44489308 - 1700071M16Rik antisense antisense MGP_129S1SvImJ_T0003784.1 MGP_129S1SvImJ_G0003406.1 mouse_genomes_project 17 44486331 44489308 - 1700071M16Rik antisense antisense MGP_129S1SvImJ_T0003785.1 MGP_129S1SvImJ_G0003406.1 mouse_genomes_project 17 44488958 44490230 - 1700071M16Rik antisense antisense MGP_129S1SvImJ_T0003786.1 MGP_129S1SvImJ_G0003406.1 mouse_genomes_project 17 44488958 44490240 - 1700071M16Rik antisense antisense MGP_129S1SvImJ_T0048005.1 MGP_129S1SvImJ_G0023839.1 mouse_genomes_project 17 48038530 48124518 - MGP_129S1SvImJ_P0048005 Ubr2 protein_coding protein_coding MGP_129S1SvImJ_T0048006.1 MGP_129S1SvImJ_G0023839.1 mouse_genomes_project 17 48038530 48124518 - MGP_129S1SvImJ_P0048006 Ubr2 protein_coding protein_coding MGP_129S1SvImJ_T0048007.1 MGP_129S1SvImJ_G0023839.1 mouse_genomes_project 17 48040597 48124205 - MGP_129S1SvImJ_P0048007 Ubr2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048613.1 MGP_129S1SvImJ_G0024038.1 mouse_genomes_project 17 81325673 81454428 + MGP_129S1SvImJ_P0048613 Vit protein_coding protein_coding MGP_129S1SvImJ_T0048614.1 MGP_129S1SvImJ_G0024038.1 mouse_genomes_project 17 81354574 81453942 + MGP_129S1SvImJ_P0048614 Vit protein_coding unknown_likely_coding MGP_129S1SvImJ_T0046326.1 MGP_129S1SvImJ_G0023391.1 mouse_genomes_project 17 25260613 25263701 + MGP_129S1SvImJ_P0046326 Mrpl28 protein_coding protein_coding MGP_129S1SvImJ_T0046327.1 MGP_129S1SvImJ_G0023391.1 mouse_genomes_project 17 25260807 25262020 + Mrpl28 protein_coding retained_intron MGP_129S1SvImJ_T0013274.1 MGP_129S1SvImJ_G0011363.1 mouse_genomes_project 17 38479079 38479729 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048430.1 MGP_129S1SvImJ_G0023987.1 mouse_genomes_project 17 68550767 68668241 - MGP_129S1SvImJ_P0048430 Mtcl1 protein_coding protein_coding MGP_129S1SvImJ_T0048431.1 MGP_129S1SvImJ_G0023987.1 mouse_genomes_project 17 68550771 68668241 - MGP_129S1SvImJ_P0048431 Mtcl1 protein_coding protein_coding MGP_129S1SvImJ_T0048432.1 MGP_129S1SvImJ_G0023987.1 mouse_genomes_project 17 68550773 68601254 - MGP_129S1SvImJ_P0048432 Mtcl1 protein_coding protein_coding MGP_129S1SvImJ_T0048433.1 MGP_129S1SvImJ_G0023987.1 mouse_genomes_project 17 68551463 68655655 - MGP_129S1SvImJ_P0048433 Mtcl1 protein_coding protein_coding MGP_129S1SvImJ_T0048434.1 MGP_129S1SvImJ_G0023987.1 mouse_genomes_project 17 68557711 68560322 - Mtcl1 protein_coding retained_intron MGP_129S1SvImJ_T0048435.1 MGP_129S1SvImJ_G0023987.1 mouse_genomes_project 17 68561742 68594009 - Mtcl1 protein_coding retained_intron MGP_129S1SvImJ_T0048436.1 MGP_129S1SvImJ_G0023987.1 mouse_genomes_project 17 68567977 68576527 - Mtcl1 protein_coding processed_transcript MGP_129S1SvImJ_T0048437.1 MGP_129S1SvImJ_G0023987.1 mouse_genomes_project 17 68568142 68593528 - Mtcl1 protein_coding processed_transcript MGP_129S1SvImJ_T0048438.1 MGP_129S1SvImJ_G0023987.1 mouse_genomes_project 17 68571807 68593142 - Mtcl1 protein_coding retained_intron MGP_129S1SvImJ_T0048439.1 MGP_129S1SvImJ_G0023987.1 mouse_genomes_project 17 68580074 68588419 - Mtcl1 protein_coding processed_transcript MGP_129S1SvImJ_T0048440.1 MGP_129S1SvImJ_G0023987.1 mouse_genomes_project 17 68601090 68666860 - Mtcl1 protein_coding retained_intron MGP_129S1SvImJ_T0102322.1 MGP_129S1SvImJ_G0040156.1 mouse_genomes_project 17 34589088 34609124 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0001012.1 MGP_129S1SvImJ_G0000941.1 mouse_genomes_project 17 53247078 53251857 - TEC TEC MGP_129S1SvImJ_T0099548.1 MGP_129S1SvImJ_G0037615.1 mouse_genomes_project 17 13706144 13706251 - Gm25598 snRNA snRNA MGP_129S1SvImJ_T0006910.1 MGP_129S1SvImJ_G0005694.1 mouse_genomes_project 17 13209151 13215264 + A930024N18Rik lincRNA lincRNA MGP_129S1SvImJ_T0100844.1 MGP_129S1SvImJ_G0038911.1 mouse_genomes_project 17 90848119 90848253 - Gm26005 snoRNA snoRNA MGP_129S1SvImJ_T0047099.1 MGP_129S1SvImJ_G0023570.1 mouse_genomes_project 17 34334851 34349993 + MGP_129S1SvImJ_P0047099 H2-Eb2 protein_coding protein_coding MGP_129S1SvImJ_T0045614.1 MGP_129S1SvImJ_G0023167.1 mouse_genomes_project 17 12772780 12775533 + MGP_129S1SvImJ_P0045614 1600012H06Rik protein_coding protein_coding MGP_129S1SvImJ_T0045615.1 MGP_129S1SvImJ_G0023167.1 mouse_genomes_project 17 12772826 12775531 + MGP_129S1SvImJ_P0045615 1600012H06Rik protein_coding protein_coding MGP_129S1SvImJ_T0045616.1 MGP_129S1SvImJ_G0023167.1 mouse_genomes_project 17 12772865 12774583 + MGP_129S1SvImJ_P0045616 1600012H06Rik protein_coding protein_coding MGP_129S1SvImJ_T0045617.1 MGP_129S1SvImJ_G0023167.1 mouse_genomes_project 17 12772867 12789155 + 1600012H06Rik protein_coding processed_transcript MGP_129S1SvImJ_T0047370.1 MGP_129S1SvImJ_G0023624.1 mouse_genomes_project 17 35292007 35309138 - MGP_129S1SvImJ_P0047370 Prrc2a protein_coding protein_coding MGP_129S1SvImJ_T0047371.1 MGP_129S1SvImJ_G0023624.1 mouse_genomes_project 17 35292019 35307210 - MGP_129S1SvImJ_P0047371 Prrc2a protein_coding protein_coding MGP_129S1SvImJ_T0047372.1 MGP_129S1SvImJ_G0023624.1 mouse_genomes_project 17 35292108 35293298 - Prrc2a protein_coding retained_intron MGP_129S1SvImJ_T0047373.1 MGP_129S1SvImJ_G0023624.1 mouse_genomes_project 17 35293264 35293884 - Prrc2a protein_coding retained_intron MGP_129S1SvImJ_T0047374.1 MGP_129S1SvImJ_G0023624.1 mouse_genomes_project 17 35296441 35297500 - Prrc2a protein_coding retained_intron MGP_129S1SvImJ_T0047375.1 MGP_129S1SvImJ_G0023624.1 mouse_genomes_project 17 35301373 35309076 - Prrc2a protein_coding processed_transcript MGP_129S1SvImJ_T0013241.1 MGP_129S1SvImJ_G0011330.1 mouse_genomes_project 17 20738747 20739195 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0047765.1 MGP_129S1SvImJ_G0023770.1 mouse_genomes_project 17 43635103 43731196 - MGP_129S1SvImJ_P0047765 Cd2ap protein_coding protein_coding MGP_129S1SvImJ_T0045829.1 MGP_129S1SvImJ_G0023268.1 mouse_genomes_project 17 22653121 22657266 - MGP_129S1SvImJ_P0045829 Paqr4 protein_coding protein_coding MGP_129S1SvImJ_T0048277.1 MGP_129S1SvImJ_G0023928.1 mouse_genomes_project 17 58263740 58267293 - MGP_129S1SvImJ_P0048277 Safb2 protein_coding protein_coding MGP_129S1SvImJ_T0048278.1 MGP_129S1SvImJ_G0023928.1 mouse_genomes_project 17 58263748 58267344 - MGP_129S1SvImJ_P0048278 Safb2 protein_coding protein_coding MGP_129S1SvImJ_T0048279.1 MGP_129S1SvImJ_G0023928.1 mouse_genomes_project 17 58265715 58287776 - MGP_129S1SvImJ_P0048279 Safb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048280.1 MGP_129S1SvImJ_G0023928.1 mouse_genomes_project 17 58265715 58287849 - MGP_129S1SvImJ_P0048280 Safb2 protein_coding protein_coding MGP_129S1SvImJ_T0048281.1 MGP_129S1SvImJ_G0023928.1 mouse_genomes_project 17 58265715 58269792 - MGP_129S1SvImJ_P0048281 Safb2 protein_coding protein_coding MGP_129S1SvImJ_T0048282.1 MGP_129S1SvImJ_G0023928.1 mouse_genomes_project 17 58265725 58275271 - Safb2 protein_coding processed_transcript MGP_129S1SvImJ_T0048283.1 MGP_129S1SvImJ_G0023928.1 mouse_genomes_project 17 58266081 58269795 - MGP_129S1SvImJ_P0048283 Safb2 protein_coding protein_coding MGP_129S1SvImJ_T0048284.1 MGP_129S1SvImJ_G0023928.1 mouse_genomes_project 17 58268773 58274212 - MGP_129S1SvImJ_P0048284 Safb2 protein_coding protein_coding MGP_129S1SvImJ_T0048285.1 MGP_129S1SvImJ_G0023928.1 mouse_genomes_project 17 58270309 58272210 - Safb2 protein_coding retained_intron MGP_129S1SvImJ_T0048286.1 MGP_129S1SvImJ_G0023928.1 mouse_genomes_project 17 58271670 58277870 - Safb2 protein_coding retained_intron MGP_129S1SvImJ_T0048287.1 MGP_129S1SvImJ_G0023928.1 mouse_genomes_project 17 58271766 58287788 - MGP_129S1SvImJ_P0048287 Safb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048288.1 MGP_129S1SvImJ_G0023928.1 mouse_genomes_project 17 58272854 58278292 - Safb2 protein_coding retained_intron MGP_129S1SvImJ_T0048289.1 MGP_129S1SvImJ_G0023928.1 mouse_genomes_project 17 58273799 58274451 - Safb2 protein_coding retained_intron MGP_129S1SvImJ_T0048290.1 MGP_129S1SvImJ_G0023928.1 mouse_genomes_project 17 58274041 58287826 - MGP_129S1SvImJ_P0048290 Safb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048291.1 MGP_129S1SvImJ_G0023928.1 mouse_genomes_project 17 58279609 58286307 - Safb2 protein_coding retained_intron MGP_129S1SvImJ_T0048292.1 MGP_129S1SvImJ_G0023928.1 mouse_genomes_project 17 58279738 58287565 - Safb2 protein_coding retained_intron MGP_129S1SvImJ_T0048293.1 MGP_129S1SvImJ_G0023928.1 mouse_genomes_project 17 58282143 58287775 - Safb2 protein_coding retained_intron MGP_129S1SvImJ_T0046409.1 MGP_129S1SvImJ_G0023412.1 mouse_genomes_project 17 26165694 26203612 + MGP_129S1SvImJ_P0046409 Syngap1 protein_coding protein_coding MGP_129S1SvImJ_T0046410.1 MGP_129S1SvImJ_G0023412.1 mouse_genomes_project 17 26165883 26197336 + MGP_129S1SvImJ_P0046410 Syngap1 protein_coding protein_coding MGP_129S1SvImJ_T0046411.1 MGP_129S1SvImJ_G0023412.1 mouse_genomes_project 17 26165893 26197296 + MGP_129S1SvImJ_P0046411 Syngap1 protein_coding protein_coding MGP_129S1SvImJ_T0046412.1 MGP_129S1SvImJ_G0023412.1 mouse_genomes_project 17 26165940 26197876 + MGP_129S1SvImJ_P0046412 Syngap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046413.1 MGP_129S1SvImJ_G0023412.1 mouse_genomes_project 17 26177446 26197688 + MGP_129S1SvImJ_P0046413 Syngap1 protein_coding protein_coding MGP_129S1SvImJ_T0046414.1 MGP_129S1SvImJ_G0023412.1 mouse_genomes_project 17 26183349 26203612 + MGP_129S1SvImJ_P0046414 Syngap1 protein_coding protein_coding MGP_129S1SvImJ_T0046415.1 MGP_129S1SvImJ_G0023412.1 mouse_genomes_project 17 26183805 26186091 + MGP_129S1SvImJ_P0046415 Syngap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046416.1 MGP_129S1SvImJ_G0023412.1 mouse_genomes_project 17 26185817 26186535 + Syngap1 protein_coding retained_intron MGP_129S1SvImJ_T0046417.1 MGP_129S1SvImJ_G0023412.1 mouse_genomes_project 17 26188285 26197317 + MGP_129S1SvImJ_P0046417 Syngap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046418.1 MGP_129S1SvImJ_G0023412.1 mouse_genomes_project 17 26188991 26197346 + MGP_129S1SvImJ_P0046418 Syngap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046419.1 MGP_129S1SvImJ_G0023412.1 mouse_genomes_project 17 26189005 26197342 + MGP_129S1SvImJ_P0046419 Syngap1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045991.1 MGP_129S1SvImJ_G0023311.1 mouse_genomes_project 17 23656341 23657478 - MGP_129S1SvImJ_P0045991 Npw protein_coding protein_coding MGP_129S1SvImJ_T0102287.1 MGP_129S1SvImJ_G0040121.1 mouse_genomes_project 17 17632914 17664885 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0048503.1 MGP_129S1SvImJ_G0024004.1 mouse_genomes_project 17 73447945 73555934 + MGP_129S1SvImJ_P0048503 Myom1 protein_coding protein_coding MGP_129S1SvImJ_T0048504.1 MGP_129S1SvImJ_G0024004.1 mouse_genomes_project 17 73447992 73555935 + MGP_129S1SvImJ_P0048504 Myom1 protein_coding protein_coding MGP_129S1SvImJ_T0048505.1 MGP_129S1SvImJ_G0024004.1 mouse_genomes_project 17 73447992 73555935 + MGP_129S1SvImJ_P0048505 Myom1 protein_coding protein_coding MGP_129S1SvImJ_T0046872.1 MGP_129S1SvImJ_G0023525.1 mouse_genomes_project 17 33191036 33191991 + MGP_129S1SvImJ_P0046872 Olfr63 protein_coding protein_coding MGP_129S1SvImJ_T0003788.1 MGP_129S1SvImJ_G0003408.1 mouse_genomes_project 17 45681060 45684760 + Runx2os2 antisense antisense MGP_129S1SvImJ_T0045475.1 MGP_129S1SvImJ_G0023129.1 mouse_genomes_project 17 5634963 5666097 + MGP_129S1SvImJ_P0045475 Fgfr1op protein_coding protein_coding MGP_129S1SvImJ_T0045476.1 MGP_129S1SvImJ_G0023129.1 mouse_genomes_project 17 5634982 5645549 + Fgfr1op protein_coding retained_intron MGP_129S1SvImJ_T0045477.1 MGP_129S1SvImJ_G0023129.1 mouse_genomes_project 17 5635002 5665769 + MGP_129S1SvImJ_P0045477 Fgfr1op protein_coding protein_coding MGP_129S1SvImJ_T0045478.1 MGP_129S1SvImJ_G0023129.1 mouse_genomes_project 17 5651733 5664239 + MGP_129S1SvImJ_P0045478 Fgfr1op protein_coding protein_coding MGP_129S1SvImJ_T0013251.1 MGP_129S1SvImJ_G0011340.1 mouse_genomes_project 17 34043143 34046470 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102332.1 MGP_129S1SvImJ_G0040166.1 mouse_genomes_project 17 36255721 36273879 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099578.1 MGP_129S1SvImJ_G0037645.1 mouse_genomes_project 17 87440324 87440436 - Gm24492 snRNA snRNA MGP_129S1SvImJ_T0102331.1 MGP_129S1SvImJ_G0040165.1 mouse_genomes_project 17 36254297 36342827 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0017612.1 MGP_129S1SvImJ_G0015352.1 mouse_genomes_project 17 37623644 37625653 + Gm20429 processed_transcript retained_intron MGP_129S1SvImJ_T0017613.1 MGP_129S1SvImJ_G0015352.1 mouse_genomes_project 17 37625033 37639019 + Gm20429 processed_transcript antisense MGP_129S1SvImJ_T0046699.1 MGP_129S1SvImJ_G0023475.1 mouse_genomes_project 17 29811851 30208864 - MGP_129S1SvImJ_P0046699 Btbd9 protein_coding protein_coding MGP_129S1SvImJ_T0046700.1 MGP_129S1SvImJ_G0023475.1 mouse_genomes_project 17 29811851 30208864 - MGP_129S1SvImJ_P0046700 Btbd9 protein_coding protein_coding MGP_129S1SvImJ_T0006999.1 MGP_129S1SvImJ_G0005760.1 mouse_genomes_project 17 90181917 90182604 + Gm29168 lincRNA lincRNA MGP_129S1SvImJ_T0047813.1 MGP_129S1SvImJ_G0023786.1 mouse_genomes_project 17 46397386 46438292 - MGP_129S1SvImJ_P0047813 Cdc5l protein_coding protein_coding MGP_129S1SvImJ_T0102298.1 MGP_129S1SvImJ_G0040132.1 mouse_genomes_project 17 19782940 19793724 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0045691.1 MGP_129S1SvImJ_G0023190.1 mouse_genomes_project 17 16048564 16049536 + MGP_129S1SvImJ_P0045691 Fpr-rs4 protein_coding protein_coding MGP_129S1SvImJ_T0046240.1 MGP_129S1SvImJ_G0023373.1 mouse_genomes_project 17 24927968 24930694 - MGP_129S1SvImJ_P0046240 Stub1 protein_coding protein_coding MGP_129S1SvImJ_T0006930.1 MGP_129S1SvImJ_G0005711.1 mouse_genomes_project 17 28507269 28509826 - lincRNA lincRNA MGP_129S1SvImJ_T0003799.1 MGP_129S1SvImJ_G0003417.1 mouse_genomes_project 17 58789111 58794041 + Gm17168 antisense antisense MGP_129S1SvImJ_T0046725.1 MGP_129S1SvImJ_G0023488.1 mouse_genomes_project 17 31152478 31252633 + MGP_129S1SvImJ_P0046725 Pde9a protein_coding protein_coding MGP_129S1SvImJ_T0046726.1 MGP_129S1SvImJ_G0023488.1 mouse_genomes_project 17 31152493 31252479 + MGP_129S1SvImJ_P0046726 Pde9a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046727.1 MGP_129S1SvImJ_G0023488.1 mouse_genomes_project 17 31152493 31252479 + MGP_129S1SvImJ_P0046727 Pde9a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046728.1 MGP_129S1SvImJ_G0023488.1 mouse_genomes_project 17 31152493 31252479 + MGP_129S1SvImJ_P0046728 Pde9a protein_coding protein_coding MGP_129S1SvImJ_T0046729.1 MGP_129S1SvImJ_G0023488.1 mouse_genomes_project 17 31152498 31252482 + MGP_129S1SvImJ_P0046729 Pde9a protein_coding protein_coding MGP_129S1SvImJ_T0046730.1 MGP_129S1SvImJ_G0023488.1 mouse_genomes_project 17 31152506 31252404 + MGP_129S1SvImJ_P0046730 Pde9a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046731.1 MGP_129S1SvImJ_G0023488.1 mouse_genomes_project 17 31152518 31252482 + MGP_129S1SvImJ_P0046731 Pde9a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046732.1 MGP_129S1SvImJ_G0023488.1 mouse_genomes_project 17 31152520 31246708 + Pde9a protein_coding retained_intron MGP_129S1SvImJ_T0046733.1 MGP_129S1SvImJ_G0023488.1 mouse_genomes_project 17 31152538 31228486 + MGP_129S1SvImJ_P0046733 Pde9a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046734.1 MGP_129S1SvImJ_G0023488.1 mouse_genomes_project 17 31202963 31232497 + MGP_129S1SvImJ_P0046734 Pde9a protein_coding protein_coding MGP_129S1SvImJ_T0046735.1 MGP_129S1SvImJ_G0023488.1 mouse_genomes_project 17 31215681 31233559 + Pde9a protein_coding retained_intron MGP_129S1SvImJ_T0046736.1 MGP_129S1SvImJ_G0023488.1 mouse_genomes_project 17 31226685 31235069 + Pde9a protein_coding retained_intron MGP_129S1SvImJ_T0046737.1 MGP_129S1SvImJ_G0023488.1 mouse_genomes_project 17 31234996 31252464 + MGP_129S1SvImJ_P0046737 Pde9a protein_coding protein_coding MGP_129S1SvImJ_T0046738.1 MGP_129S1SvImJ_G0023488.1 mouse_genomes_project 17 31245953 31252429 + Pde9a protein_coding processed_transcript MGP_129S1SvImJ_T0013273.1 MGP_129S1SvImJ_G0011362.1 mouse_genomes_project 17 38448769 38449263 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102323.1 MGP_129S1SvImJ_G0040157.1 mouse_genomes_project 17 34843282 34846817 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0048737.1 MGP_129S1SvImJ_G0024094.1 mouse_genomes_project 17 90266275 90271279 + MGP_129S1SvImJ_P0048737 Tmem247 protein_coding protein_coding MGP_129S1SvImJ_T0048738.1 MGP_129S1SvImJ_G0024094.1 mouse_genomes_project 17 90267320 90271286 + MGP_129S1SvImJ_P0048738 Tmem247 protein_coding protein_coding MGP_129S1SvImJ_T0045561.1 MGP_129S1SvImJ_G0023153.1 mouse_genomes_project 17 10580590 10587383 - MGP_129S1SvImJ_P0045561 Mrpl18 protein_coding protein_coding MGP_129S1SvImJ_T0045562.1 MGP_129S1SvImJ_G0023153.1 mouse_genomes_project 17 10583087 10586662 - Mrpl18 protein_coding processed_transcript MGP_129S1SvImJ_T0045563.1 MGP_129S1SvImJ_G0023153.1 mouse_genomes_project 17 10583192 10587141 - Mrpl18 protein_coding retained_intron MGP_129S1SvImJ_T0045564.1 MGP_129S1SvImJ_G0023153.1 mouse_genomes_project 17 10583236 10587240 - Mrpl18 protein_coding processed_transcript MGP_129S1SvImJ_T0045565.1 MGP_129S1SvImJ_G0023153.1 mouse_genomes_project 17 10586539 10587107 - Mrpl18 protein_coding retained_intron MGP_129S1SvImJ_T0048450.1 MGP_129S1SvImJ_G0023993.1 mouse_genomes_project 17 70130008 70307323 - MGP_129S1SvImJ_P0048450 Arhgap28 protein_coding protein_coding MGP_129S1SvImJ_T0048451.1 MGP_129S1SvImJ_G0023993.1 mouse_genomes_project 17 70133030 70199660 - MGP_129S1SvImJ_P0048451 Arhgap28 protein_coding protein_coding MGP_129S1SvImJ_T0048452.1 MGP_129S1SvImJ_G0023993.1 mouse_genomes_project 17 70147385 70168184 - MGP_129S1SvImJ_P0048452 Arhgap28 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048453.1 MGP_129S1SvImJ_G0023993.1 mouse_genomes_project 17 70164091 70193718 - MGP_129S1SvImJ_P0048453 Arhgap28 protein_coding protein_coding MGP_129S1SvImJ_T0048573.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77188968 77380698 + MGP_129S1SvImJ_P0048573 Birc6 protein_coding protein_coding MGP_129S1SvImJ_T0048574.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77189141 77378401 + MGP_129S1SvImJ_P0048574 Birc6 protein_coding protein_coding MGP_129S1SvImJ_T0048575.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77189141 77378401 + MGP_129S1SvImJ_P0048575 Birc6 protein_coding protein_coding MGP_129S1SvImJ_T0048576.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77189141 77378401 + MGP_129S1SvImJ_P0048576 Birc6 protein_coding protein_coding MGP_129S1SvImJ_T0048577.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77189195 77228003 + Birc6 protein_coding retained_intron MGP_129S1SvImJ_T0048578.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77189225 77378401 + MGP_129S1SvImJ_P0048578 Birc6 protein_coding protein_coding MGP_129S1SvImJ_T0048579.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77207596 77210517 + Birc6 protein_coding retained_intron MGP_129S1SvImJ_T0048580.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77217936 77221991 + Birc6 protein_coding retained_intron MGP_129S1SvImJ_T0048581.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77217943 77223708 + Birc6 protein_coding retained_intron MGP_129S1SvImJ_T0048582.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77221618 77223855 + Birc6 protein_coding retained_intron MGP_129S1SvImJ_T0048583.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77221947 77226947 + Birc6 protein_coding retained_intron MGP_129S1SvImJ_T0048584.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77263104 77288076 + MGP_129S1SvImJ_P0048584 Birc6 protein_coding protein_coding MGP_129S1SvImJ_T0048585.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77269639 77272841 + MGP_129S1SvImJ_P0048585 Birc6 protein_coding protein_coding MGP_129S1SvImJ_T0048586.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77278825 77288075 + MGP_129S1SvImJ_P0048586 Birc6 protein_coding protein_coding MGP_129S1SvImJ_T0048587.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77279194 77308818 + Birc6 protein_coding retained_intron MGP_129S1SvImJ_T0048588.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77279224 77286878 + MGP_129S1SvImJ_P0048588 Birc6 protein_coding protein_coding MGP_129S1SvImJ_T0048589.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77279987 77283780 + Birc6 protein_coding retained_intron MGP_129S1SvImJ_T0048590.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77286509 77288075 + Birc6 protein_coding retained_intron MGP_129S1SvImJ_T0048591.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77320760 77327501 + MGP_129S1SvImJ_P0048591 Birc6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048592.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77320770 77322595 + Birc6 protein_coding processed_transcript MGP_129S1SvImJ_T0048593.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77322518 77380689 + MGP_129S1SvImJ_P0048593 Birc6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048594.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77327382 77338161 + Birc6 protein_coding retained_intron MGP_129S1SvImJ_T0048595.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77339555 77352391 + Birc6 protein_coding retained_intron MGP_129S1SvImJ_T0048596.1 MGP_129S1SvImJ_G0024031.1 mouse_genomes_project 17 77371846 77380411 + Birc6 protein_coding retained_intron MGP_129S1SvImJ_T0047686.1 MGP_129S1SvImJ_G0023708.1 mouse_genomes_project 17 37676048 37677158 - MGP_129S1SvImJ_P0047686 protein_coding protein_coding MGP_129S1SvImJ_T0048555.1 MGP_129S1SvImJ_G0024019.1 mouse_genomes_project 17 75865746 75960680 - MGP_129S1SvImJ_P0048555 Capn13 protein_coding protein_coding MGP_129S1SvImJ_T0101650.1 MGP_129S1SvImJ_G0039681.1 mouse_genomes_project 17 73289694 73292267 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0047165.1 MGP_129S1SvImJ_G0023583.1 mouse_genomes_project 17 34695413 34706118 - MGP_129S1SvImJ_P0047165 Ppt2 protein_coding protein_coding MGP_129S1SvImJ_T0047166.1 MGP_129S1SvImJ_G0023583.1 mouse_genomes_project 17 34695414 34706060 - MGP_129S1SvImJ_P0047166 Ppt2 protein_coding protein_coding MGP_129S1SvImJ_T0047167.1 MGP_129S1SvImJ_G0023583.1 mouse_genomes_project 17 34695415 34705831 - MGP_129S1SvImJ_P0047167 Ppt2 protein_coding protein_coding MGP_129S1SvImJ_T0047168.1 MGP_129S1SvImJ_G0023583.1 mouse_genomes_project 17 34695980 34706204 - MGP_129S1SvImJ_P0047168 Ppt2 protein_coding protein_coding MGP_129S1SvImJ_T0047169.1 MGP_129S1SvImJ_G0023583.1 mouse_genomes_project 17 34695980 34706718 - MGP_129S1SvImJ_P0047169 Ppt2 protein_coding protein_coding MGP_129S1SvImJ_T0047170.1 MGP_129S1SvImJ_G0023583.1 mouse_genomes_project 17 34695980 34706164 - MGP_129S1SvImJ_P0047170 Ppt2 protein_coding protein_coding MGP_129S1SvImJ_T0047171.1 MGP_129S1SvImJ_G0023583.1 mouse_genomes_project 17 34696065 34705611 - MGP_129S1SvImJ_P0047171 Ppt2 protein_coding protein_coding MGP_129S1SvImJ_T0047172.1 MGP_129S1SvImJ_G0023583.1 mouse_genomes_project 17 34701839 34707189 - MGP_129S1SvImJ_P0047172 Ppt2 protein_coding protein_coding MGP_129S1SvImJ_T0047173.1 MGP_129S1SvImJ_G0023583.1 mouse_genomes_project 17 34702035 34706109 - MGP_129S1SvImJ_P0047173 Ppt2 protein_coding protein_coding MGP_129S1SvImJ_T0047174.1 MGP_129S1SvImJ_G0023583.1 mouse_genomes_project 17 34705171 34705833 - MGP_129S1SvImJ_P0047174 Ppt2 protein_coding protein_coding MGP_129S1SvImJ_T0013236.1 MGP_129S1SvImJ_G0011325.1 mouse_genomes_project 17 10483422 10484446 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0046304.1 MGP_129S1SvImJ_G0023383.1 mouse_genomes_project 17 25055011 25057689 - MGP_129S1SvImJ_P0046304 Nhlrc4 protein_coding protein_coding MGP_129S1SvImJ_T0046305.1 MGP_129S1SvImJ_G0023383.1 mouse_genomes_project 17 25056930 25057718 - Nhlrc4 protein_coding processed_transcript MGP_129S1SvImJ_T0046306.1 MGP_129S1SvImJ_G0023383.1 mouse_genomes_project 17 25057018 25057588 - Nhlrc4 protein_coding processed_transcript MGP_129S1SvImJ_T0048394.1 MGP_129S1SvImJ_G0023976.1 mouse_genomes_project 17 67359911 67665339 - MGP_129S1SvImJ_P0048394 Tmem232 protein_coding protein_coding MGP_129S1SvImJ_T0048395.1 MGP_129S1SvImJ_G0023976.1 mouse_genomes_project 17 67359913 67665333 - MGP_129S1SvImJ_P0048395 Tmem232 protein_coding protein_coding MGP_129S1SvImJ_T0045707.1 MGP_129S1SvImJ_G0023206.1 mouse_genomes_project 17 19039950 19070465 + MGP_129S1SvImJ_P0045707 Vmn2r107 protein_coding protein_coding MGP_129S1SvImJ_T0048735.1 MGP_129S1SvImJ_G0024092.1 mouse_genomes_project 17 89820916 89828415 - MGP_129S1SvImJ_P0048735 Gm10309 protein_coding protein_coding MGP_129S1SvImJ_T0048643.1 MGP_129S1SvImJ_G0024050.1 mouse_genomes_project 17 82190327 82211521 - MGP_129S1SvImJ_P0048643 Cdc42ep3 protein_coding protein_coding MGP_129S1SvImJ_T0048236.1 MGP_129S1SvImJ_G0023909.1 mouse_genomes_project 17 57670614 57705666 + MGP_129S1SvImJ_P0048236 Chaf1a protein_coding protein_coding MGP_129S1SvImJ_T0048000.1 MGP_129S1SvImJ_G0023835.1 mouse_genomes_project 17 47896563 47931773 - MGP_129S1SvImJ_P0048000 Gltscr1l protein_coding protein_coding MGP_129S1SvImJ_T0046404.1 MGP_129S1SvImJ_G0023409.1 mouse_genomes_project 17 26141882 26162335 + MGP_129S1SvImJ_P0046404 Kifc1 protein_coding protein_coding MGP_129S1SvImJ_T0046405.1 MGP_129S1SvImJ_G0023409.1 mouse_genomes_project 17 26141882 26144143 + MGP_129S1SvImJ_P0046405 Kifc1 protein_coding protein_coding MGP_129S1SvImJ_T0045742.1 MGP_129S1SvImJ_G0023232.1 mouse_genomes_project 17 20306239 20329131 + MGP_129S1SvImJ_P0045742 Zfp948 protein_coding protein_coding MGP_129S1SvImJ_T0045472.1 MGP_129S1SvImJ_G0023127.1 mouse_genomes_project 17 5569936 5614105 - MGP_129S1SvImJ_P0045472 protein_coding protein_coding MGP_129S1SvImJ_T0045473.1 MGP_129S1SvImJ_G0023127.1 mouse_genomes_project 17 5585968 5614152 - MGP_129S1SvImJ_P0045473 protein_coding protein_coding MGP_129S1SvImJ_T0013249.1 MGP_129S1SvImJ_G0011338.1 mouse_genomes_project 17 31759533 31759953 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0047625.1 MGP_129S1SvImJ_G0023686.1 mouse_genomes_project 17 37248976 37262207 + MGP_129S1SvImJ_P0047625 Trim31 protein_coding protein_coding MGP_129S1SvImJ_T0048086.1 MGP_129S1SvImJ_G0023858.1 mouse_genomes_project 17 49041699 49070176 - MGP_129S1SvImJ_P0048086 Mdfi protein_coding protein_coding MGP_129S1SvImJ_T0048087.1 MGP_129S1SvImJ_G0023858.1 mouse_genomes_project 17 49042290 49070571 - MGP_129S1SvImJ_P0048087 Mdfi protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048088.1 MGP_129S1SvImJ_G0023858.1 mouse_genomes_project 17 49042303 49070193 - Mdfi protein_coding processed_transcript MGP_129S1SvImJ_T0048089.1 MGP_129S1SvImJ_G0023858.1 mouse_genomes_project 17 49042421 49070104 - MGP_129S1SvImJ_P0048089 Mdfi protein_coding protein_coding MGP_129S1SvImJ_T0048090.1 MGP_129S1SvImJ_G0023858.1 mouse_genomes_project 17 49054911 49070196 - Mdfi protein_coding retained_intron MGP_129S1SvImJ_T0048091.1 MGP_129S1SvImJ_G0023858.1 mouse_genomes_project 17 49055950 49070207 - MGP_129S1SvImJ_P0048091 Mdfi protein_coding protein_coding MGP_129S1SvImJ_T0048092.1 MGP_129S1SvImJ_G0023858.1 mouse_genomes_project 17 49056039 49070180 - MGP_129S1SvImJ_P0048092 Mdfi protein_coding protein_coding MGP_129S1SvImJ_T0048093.1 MGP_129S1SvImJ_G0023858.1 mouse_genomes_project 17 49060102 49070165 - MGP_129S1SvImJ_P0048093 Mdfi protein_coding protein_coding MGP_129S1SvImJ_T0048806.1 MGP_129S1SvImJ_G0024114.1 mouse_genomes_project 17 92503960 92730974 - MGP_129S1SvImJ_P0048806 Fshr protein_coding protein_coding MGP_129S1SvImJ_T0047048.1 MGP_129S1SvImJ_G0023557.1 mouse_genomes_project 17 34089599 34093885 - MGP_129S1SvImJ_P0047048 Brd2 protein_coding protein_coding MGP_129S1SvImJ_T0047049.1 MGP_129S1SvImJ_G0023557.1 mouse_genomes_project 17 34089599 34099325 - MGP_129S1SvImJ_P0047049 Brd2 protein_coding protein_coding MGP_129S1SvImJ_T0047050.1 MGP_129S1SvImJ_G0023557.1 mouse_genomes_project 17 34089599 34099900 - MGP_129S1SvImJ_P0047050 Brd2 protein_coding protein_coding MGP_129S1SvImJ_T0047051.1 MGP_129S1SvImJ_G0023557.1 mouse_genomes_project 17 34089606 34097989 - MGP_129S1SvImJ_P0047051 Brd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047052.1 MGP_129S1SvImJ_G0023557.1 mouse_genomes_project 17 34090260 34091309 - Brd2 protein_coding retained_intron MGP_129S1SvImJ_T0047053.1 MGP_129S1SvImJ_G0023557.1 mouse_genomes_project 17 34091335 34092528 - Brd2 protein_coding retained_intron MGP_129S1SvImJ_T0047054.1 MGP_129S1SvImJ_G0023557.1 mouse_genomes_project 17 34091337 34092554 - MGP_129S1SvImJ_P0047054 Brd2 protein_coding protein_coding MGP_129S1SvImJ_T0047055.1 MGP_129S1SvImJ_G0023557.1 mouse_genomes_project 17 34091372 34092653 - MGP_129S1SvImJ_P0047055 Brd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047056.1 MGP_129S1SvImJ_G0023557.1 mouse_genomes_project 17 34091661 34099571 - MGP_129S1SvImJ_P0047056 Brd2 protein_coding protein_coding MGP_129S1SvImJ_T0047057.1 MGP_129S1SvImJ_G0023557.1 mouse_genomes_project 17 34092340 34093047 - Brd2 protein_coding retained_intron MGP_129S1SvImJ_T0047058.1 MGP_129S1SvImJ_G0023557.1 mouse_genomes_project 17 34097105 34099533 - Brd2 protein_coding processed_transcript MGP_129S1SvImJ_T0047059.1 MGP_129S1SvImJ_G0023557.1 mouse_genomes_project 17 34097135 34100202 - Brd2 protein_coding processed_transcript MGP_129S1SvImJ_T0047060.1 MGP_129S1SvImJ_G0023557.1 mouse_genomes_project 17 34097444 34100217 - Brd2 protein_coding processed_transcript MGP_129S1SvImJ_T0100839.1 MGP_129S1SvImJ_G0038906.1 mouse_genomes_project 17 75751209 75751314 + Gm25406 snoRNA snoRNA MGP_129S1SvImJ_T0100843.1 MGP_129S1SvImJ_G0038910.1 mouse_genomes_project 17 90412045 90412177 - Gm24648 snoRNA snoRNA MGP_129S1SvImJ_T0045697.1 MGP_129S1SvImJ_G0023196.1 mouse_genomes_project 17 16301260 16338966 - MGP_129S1SvImJ_P0045697 Vmn2r94 protein_coding protein_coding MGP_129S1SvImJ_T0006904.1 MGP_129S1SvImJ_G0005689.1 mouse_genomes_project 17 6661846 6684380 - 6530411M01Rik lincRNA lincRNA MGP_129S1SvImJ_T0046564.1 MGP_129S1SvImJ_G0023446.1 mouse_genomes_project 17 28020035 28059435 - MGP_129S1SvImJ_P0046564 Srpk1 protein_coding protein_coding MGP_129S1SvImJ_T0046565.1 MGP_129S1SvImJ_G0023446.1 mouse_genomes_project 17 28022424 28041410 - MGP_129S1SvImJ_P0046565 Srpk1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046566.1 MGP_129S1SvImJ_G0023446.1 mouse_genomes_project 17 28022822 28025259 - Srpk1 protein_coding retained_intron MGP_129S1SvImJ_T0046567.1 MGP_129S1SvImJ_G0023446.1 mouse_genomes_project 17 28028333 28033642 - Srpk1 protein_coding retained_intron MGP_129S1SvImJ_T0046568.1 MGP_129S1SvImJ_G0023446.1 mouse_genomes_project 17 28033091 28033985 - Srpk1 protein_coding retained_intron MGP_129S1SvImJ_T0046569.1 MGP_129S1SvImJ_G0023446.1 mouse_genomes_project 17 28035268 28059365 - Srpk1 protein_coding retained_intron MGP_129S1SvImJ_T0046570.1 MGP_129S1SvImJ_G0023446.1 mouse_genomes_project 17 28057056 28059386 - MGP_129S1SvImJ_P0046570 Srpk1 protein_coding protein_coding MGP_129S1SvImJ_T0045823.1 MGP_129S1SvImJ_G0023266.1 mouse_genomes_project 17 22615648 22638534 - protein_coding retained_intron MGP_129S1SvImJ_T0045824.1 MGP_129S1SvImJ_G0023266.1 mouse_genomes_project 17 22615648 22636468 - MGP_129S1SvImJ_P0045824 protein_coding protein_coding MGP_129S1SvImJ_T0045825.1 MGP_129S1SvImJ_G0023266.1 mouse_genomes_project 17 22615648 22638534 - MGP_129S1SvImJ_P0045825 protein_coding protein_coding MGP_129S1SvImJ_T0045826.1 MGP_129S1SvImJ_G0023266.1 mouse_genomes_project 17 22616213 22637691 - protein_coding retained_intron MGP_129S1SvImJ_T0045827.1 MGP_129S1SvImJ_G0023266.1 mouse_genomes_project 17 22616213 22617495 - protein_coding retained_intron MGP_129S1SvImJ_T0098526.1 MGP_129S1SvImJ_G0036611.1 mouse_genomes_project 17 3312068 3312190 + n-R5s26 rRNA rRNA MGP_129S1SvImJ_T0048219.1 MGP_129S1SvImJ_G0023901.1 mouse_genomes_project 17 57559216 57571899 - MGP_129S1SvImJ_P0048219 Zfp119b protein_coding protein_coding MGP_129S1SvImJ_T0045693.1 MGP_129S1SvImJ_G0023192.1 mouse_genomes_project 17 16092135 17665093 + MGP_129S1SvImJ_P0045693 protein_coding protein_coding MGP_129S1SvImJ_T0045611.1 MGP_129S1SvImJ_G0023165.1 mouse_genomes_project 17 12501136 12530553 - MGP_129S1SvImJ_P0045611 Thbs2 protein_coding protein_coding MGP_129S1SvImJ_T0048258.1 MGP_129S1SvImJ_G0023920.1 mouse_genomes_project 17 57924444 57926864 + MGP_129S1SvImJ_P0048258 protein_coding protein_coding MGP_129S1SvImJ_T0047733.1 MGP_129S1SvImJ_G0023745.1 mouse_genomes_project 17 39621311 39622023 - MGP_129S1SvImJ_P0047733 Gm21903 protein_coding protein_coding MGP_129S1SvImJ_T0099574.1 MGP_129S1SvImJ_G0037641.1 mouse_genomes_project 17 75530107 75530214 + Gm23649 snRNA snRNA MGP_129S1SvImJ_T0045992.1 MGP_129S1SvImJ_G0023312.1 mouse_genomes_project 17 23675316 23690334 + MGP_129S1SvImJ_P0045992 Zfp598 protein_coding protein_coding MGP_129S1SvImJ_T0006933.1 MGP_129S1SvImJ_G0005714.1 mouse_genomes_project 17 28614050 28640370 + Gm16194 lincRNA lincRNA MGP_129S1SvImJ_T0006934.1 MGP_129S1SvImJ_G0005714.1 mouse_genomes_project 17 28614075 28640376 + Gm16194 lincRNA lincRNA MGP_129S1SvImJ_T0006935.1 MGP_129S1SvImJ_G0005714.1 mouse_genomes_project 17 28614086 28620866 + Gm16194 lincRNA lincRNA MGP_129S1SvImJ_T0006936.1 MGP_129S1SvImJ_G0005714.1 mouse_genomes_project 17 28614104 28640488 + Gm16194 lincRNA lincRNA MGP_129S1SvImJ_T0045447.1 MGP_129S1SvImJ_G0023112.1 mouse_genomes_project 17 3620449 3628270 + MGP_129S1SvImJ_P0045447 protein_coding protein_coding MGP_129S1SvImJ_T0045451.1 MGP_129S1SvImJ_G0023112.1 mouse_genomes_project 17 3620582 3626504 + protein_coding retained_intron MGP_129S1SvImJ_T0010230.1 MGP_129S1SvImJ_G0008346.1 mouse_genomes_project 17 40125597 40125707 - Gm26376 miRNA miRNA MGP_129S1SvImJ_T0046858.1 MGP_129S1SvImJ_G0023518.1 mouse_genomes_project 17 32884524 32889826 + Zfp952 protein_coding processed_transcript MGP_129S1SvImJ_T0046859.1 MGP_129S1SvImJ_G0023518.1 mouse_genomes_project 17 32884592 32898846 + Zfp952 protein_coding processed_transcript MGP_129S1SvImJ_T0046860.1 MGP_129S1SvImJ_G0023518.1 mouse_genomes_project 17 32884592 32898846 + MGP_129S1SvImJ_P0046860 Zfp952 protein_coding protein_coding MGP_129S1SvImJ_T0046861.1 MGP_129S1SvImJ_G0023518.1 mouse_genomes_project 17 32884596 32896475 + MGP_129S1SvImJ_P0046861 Zfp952 protein_coding protein_coding MGP_129S1SvImJ_T0011451.1 MGP_129S1SvImJ_G0009567.1 mouse_genomes_project 17 50009500 50009758 - Gm23642 misc_RNA misc_RNA MGP_129S1SvImJ_T0048398.1 MGP_129S1SvImJ_G0023979.1 mouse_genomes_project 17 67783341 67926349 - MGP_129S1SvImJ_P0048398 Rab31 protein_coding protein_coding MGP_129S1SvImJ_T0047351.1 MGP_129S1SvImJ_G0023621.1 mouse_genomes_project 17 35267784 35268322 + D17H6S53E protein_coding retained_intron MGP_129S1SvImJ_T0047352.1 MGP_129S1SvImJ_G0023621.1 mouse_genomes_project 17 35267797 35272040 + MGP_129S1SvImJ_P0047352 D17H6S53E protein_coding protein_coding MGP_129S1SvImJ_T0010193.1 MGP_129S1SvImJ_G0008309.1 mouse_genomes_project 17 22748515 22748594 + Mir5125 miRNA miRNA MGP_129S1SvImJ_T0046914.1 MGP_129S1SvImJ_G0023534.1 mouse_genomes_project 17 33603190 33648859 - MGP_129S1SvImJ_P0046914 March2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046915.1 MGP_129S1SvImJ_G0023534.1 mouse_genomes_project 17 33603210 33648834 - MGP_129S1SvImJ_P0046915 March2 protein_coding protein_coding MGP_129S1SvImJ_T0046916.1 MGP_129S1SvImJ_G0023534.1 mouse_genomes_project 17 33603311 33648834 - MGP_129S1SvImJ_P0046916 March2 protein_coding protein_coding MGP_129S1SvImJ_T0046917.1 MGP_129S1SvImJ_G0023534.1 mouse_genomes_project 17 33610553 33648829 - MGP_129S1SvImJ_P0046917 March2 protein_coding protein_coding MGP_129S1SvImJ_T0046918.1 MGP_129S1SvImJ_G0023534.1 mouse_genomes_project 17 33610553 33648842 - MGP_129S1SvImJ_P0046918 March2 protein_coding protein_coding MGP_129S1SvImJ_T0046919.1 MGP_129S1SvImJ_G0023534.1 mouse_genomes_project 17 33610877 33625748 - MGP_129S1SvImJ_P0046919 March2 protein_coding protein_coding MGP_129S1SvImJ_T0046920.1 MGP_129S1SvImJ_G0023534.1 mouse_genomes_project 17 33613255 33648846 - MGP_129S1SvImJ_P0046920 March2 protein_coding protein_coding MGP_129S1SvImJ_T0046921.1 MGP_129S1SvImJ_G0023534.1 mouse_genomes_project 17 33615064 33648780 - MGP_129S1SvImJ_P0046921 March2 protein_coding protein_coding MGP_129S1SvImJ_T0046922.1 MGP_129S1SvImJ_G0023534.1 mouse_genomes_project 17 33625685 33635862 - MGP_129S1SvImJ_P0046922 March2 protein_coding protein_coding MGP_129S1SvImJ_T0048055.1 MGP_129S1SvImJ_G0023852.1 mouse_genomes_project 17 48896458 48897997 - MGP_129S1SvImJ_P0048055 Tomm6 protein_coding protein_coding MGP_129S1SvImJ_T0048057.1 MGP_129S1SvImJ_G0023852.1 mouse_genomes_project 17 48896552 48898200 - Tomm6 protein_coding retained_intron MGP_129S1SvImJ_T0048058.1 MGP_129S1SvImJ_G0023852.1 mouse_genomes_project 17 48896552 48897882 - MGP_129S1SvImJ_P0048058 Tomm6 protein_coding protein_coding MGP_129S1SvImJ_T0047741.1 MGP_129S1SvImJ_G0023753.1 mouse_genomes_project 17 41089441 41117744 - MGP_129S1SvImJ_P0047741 Crisp1 protein_coding protein_coding MGP_129S1SvImJ_T0099571.1 MGP_129S1SvImJ_G0037638.1 mouse_genomes_project 17 62343659 62343822 + Gm23447 snRNA snRNA MGP_129S1SvImJ_T0046464.1 MGP_129S1SvImJ_G0023425.1 mouse_genomes_project 17 26977951 27034396 + MGP_129S1SvImJ_P0046464 Pacsin1 protein_coding protein_coding MGP_129S1SvImJ_T0046465.1 MGP_129S1SvImJ_G0023425.1 mouse_genomes_project 17 26978030 27036839 + MGP_129S1SvImJ_P0046465 Pacsin1 protein_coding protein_coding MGP_129S1SvImJ_T0046466.1 MGP_129S1SvImJ_G0023425.1 mouse_genomes_project 17 26978085 27034412 + MGP_129S1SvImJ_P0046466 Pacsin1 protein_coding protein_coding MGP_129S1SvImJ_T0046467.1 MGP_129S1SvImJ_G0023425.1 mouse_genomes_project 17 27005299 27034396 + MGP_129S1SvImJ_P0046467 Pacsin1 protein_coding protein_coding MGP_129S1SvImJ_T0046468.1 MGP_129S1SvImJ_G0023425.1 mouse_genomes_project 17 27005329 27007232 + Pacsin1 protein_coding processed_transcript MGP_129S1SvImJ_T0045459.1 MGP_129S1SvImJ_G0023119.1 mouse_genomes_project 17 4623257 4624980 - MGP_129S1SvImJ_P0045459 Ttll2 protein_coding protein_coding MGP_129S1SvImJ_T0047554.1 MGP_129S1SvImJ_G0023663.1 mouse_genomes_project 17 36171655 36188285 - MGP_129S1SvImJ_P0047554 Abcf1 protein_coding protein_coding MGP_129S1SvImJ_T0047555.1 MGP_129S1SvImJ_G0023663.1 mouse_genomes_project 17 36172123 36173323 - Abcf1 protein_coding retained_intron MGP_129S1SvImJ_T0047556.1 MGP_129S1SvImJ_G0023663.1 mouse_genomes_project 17 36172137 36173025 - Abcf1 protein_coding retained_intron MGP_129S1SvImJ_T0047557.1 MGP_129S1SvImJ_G0023663.1 mouse_genomes_project 17 36172907 36174303 - Abcf1 protein_coding retained_intron MGP_129S1SvImJ_T0047558.1 MGP_129S1SvImJ_G0023663.1 mouse_genomes_project 17 36173506 36174451 - Abcf1 protein_coding retained_intron MGP_129S1SvImJ_T0047559.1 MGP_129S1SvImJ_G0023663.1 mouse_genomes_project 17 36176537 36179110 - Abcf1 protein_coding retained_intron MGP_129S1SvImJ_T0047560.1 MGP_129S1SvImJ_G0023663.1 mouse_genomes_project 17 36178472 36186886 - MGP_129S1SvImJ_P0047560 Abcf1 protein_coding protein_coding MGP_129S1SvImJ_T0047561.1 MGP_129S1SvImJ_G0023663.1 mouse_genomes_project 17 36179091 36188285 - MGP_129S1SvImJ_P0047561 Abcf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0098530.1 MGP_129S1SvImJ_G0036615.1 mouse_genomes_project 17 48422704 48422777 + Gm26216 rRNA rRNA MGP_129S1SvImJ_T0047814.1 MGP_129S1SvImJ_G0023787.1 mouse_genomes_project 17 46455624 46483627 - MGP_129S1SvImJ_P0047814 Spats1 protein_coding protein_coding MGP_129S1SvImJ_T0047747.1 MGP_129S1SvImJ_G0023759.1 mouse_genomes_project 17 41531630 41536288 + MGP_129S1SvImJ_P0047747 Esp1 protein_coding protein_coding MGP_129S1SvImJ_T0003811.1 MGP_129S1SvImJ_G0003427.1 mouse_genomes_project 17 90748087 90750320 - 0610012D04Rik antisense antisense MGP_129S1SvImJ_T0046838.1 MGP_129S1SvImJ_G0023511.1 mouse_genomes_project 17 32649179 32669766 - MGP_129S1SvImJ_P0046838 Zfp871 protein_coding protein_coding MGP_129S1SvImJ_T0046839.1 MGP_129S1SvImJ_G0023511.1 mouse_genomes_project 17 32655084 32669876 - Zfp871 protein_coding processed_transcript MGP_129S1SvImJ_T0048153.1 MGP_129S1SvImJ_G0023877.1 mouse_genomes_project 17 50802269 50811689 + MGP_129S1SvImJ_P0048153 Mocs1 protein_coding protein_coding MGP_129S1SvImJ_T0048154.1 MGP_129S1SvImJ_G0023877.1 mouse_genomes_project 17 50802271 50823195 + MGP_129S1SvImJ_P0048154 Mocs1 protein_coding protein_coding MGP_129S1SvImJ_T0048155.1 MGP_129S1SvImJ_G0023877.1 mouse_genomes_project 17 50802317 50823198 + MGP_129S1SvImJ_P0048155 Mocs1 protein_coding protein_coding MGP_129S1SvImJ_T0048156.1 MGP_129S1SvImJ_G0023877.1 mouse_genomes_project 17 50802349 50820936 + MGP_129S1SvImJ_P0048156 Mocs1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048157.1 MGP_129S1SvImJ_G0023877.1 mouse_genomes_project 17 50802349 50820936 + MGP_129S1SvImJ_P0048157 Mocs1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048158.1 MGP_129S1SvImJ_G0023877.1 mouse_genomes_project 17 50807104 50809429 + Mocs1 protein_coding processed_transcript MGP_129S1SvImJ_T0048159.1 MGP_129S1SvImJ_G0023877.1 mouse_genomes_project 17 50816092 50820414 + MGP_129S1SvImJ_P0048159 Mocs1 protein_coding protein_coding MGP_129S1SvImJ_T0048160.1 MGP_129S1SvImJ_G0023877.1 mouse_genomes_project 17 50818544 50823198 + MGP_129S1SvImJ_P0048160 Mocs1 protein_coding protein_coding MGP_129S1SvImJ_T0048730.1 MGP_129S1SvImJ_G0024091.1 mouse_genomes_project 17 89472073 89986091 + MGP_129S1SvImJ_P0048730 Prkce protein_coding protein_coding MGP_129S1SvImJ_T0048731.1 MGP_129S1SvImJ_G0024091.1 mouse_genomes_project 17 89472107 89483172 + MGP_129S1SvImJ_P0048731 Prkce protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048732.1 MGP_129S1SvImJ_G0024091.1 mouse_genomes_project 17 89472462 89983588 + MGP_129S1SvImJ_P0048732 Prkce protein_coding protein_coding MGP_129S1SvImJ_T0048733.1 MGP_129S1SvImJ_G0024091.1 mouse_genomes_project 17 89813748 89819291 + Prkce protein_coding retained_intron MGP_129S1SvImJ_T0048734.1 MGP_129S1SvImJ_G0024091.1 mouse_genomes_project 17 89816513 89819636 + Prkce protein_coding retained_intron MGP_129S1SvImJ_T0046436.1 MGP_129S1SvImJ_G0023418.1 mouse_genomes_project 17 26394363 26419659 - MGP_129S1SvImJ_P0046436 Ip6k3 protein_coding protein_coding MGP_129S1SvImJ_T0098527.1 MGP_129S1SvImJ_G0036612.1 mouse_genomes_project 17 30787355 30787483 + Gm25447 rRNA rRNA MGP_129S1SvImJ_T0046966.1 MGP_129S1SvImJ_G0023542.1 mouse_genomes_project 17 33865164 33869549 + MGP_129S1SvImJ_P0046966 Tapbp protein_coding protein_coding MGP_129S1SvImJ_T0046969.1 MGP_129S1SvImJ_G0023542.1 mouse_genomes_project 17 33868465 33878384 + MGP_129S1SvImJ_P0046969 Tapbp protein_coding protein_coding MGP_129S1SvImJ_T0046970.1 MGP_129S1SvImJ_G0023542.1 mouse_genomes_project 17 33868645 33869509 + Tapbp protein_coding retained_intron MGP_129S1SvImJ_T0046971.1 MGP_129S1SvImJ_G0023542.1 mouse_genomes_project 17 33869661 33875293 + Tapbp protein_coding processed_transcript MGP_129S1SvImJ_T0046972.1 MGP_129S1SvImJ_G0023542.1 mouse_genomes_project 17 33875213 33877373 + Tapbp protein_coding retained_intron MGP_129S1SvImJ_T0045919.1 MGP_129S1SvImJ_G0023293.1 mouse_genomes_project 17 23173133 23178857 - MGP_129S1SvImJ_P0045919 1600002H07Rik protein_coding protein_coding MGP_129S1SvImJ_T0045920.1 MGP_129S1SvImJ_G0023293.1 mouse_genomes_project 17 23173318 23178918 - 1600002H07Rik protein_coding retained_intron MGP_129S1SvImJ_T0045921.1 MGP_129S1SvImJ_G0023293.1 mouse_genomes_project 17 23173625 23178759 - MGP_129S1SvImJ_P0045921 1600002H07Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045922.1 MGP_129S1SvImJ_G0023293.1 mouse_genomes_project 17 23177245 23178798 - 1600002H07Rik protein_coding retained_intron MGP_129S1SvImJ_T0045923.1 MGP_129S1SvImJ_G0023293.1 mouse_genomes_project 17 23177847 23178820 - 1600002H07Rik protein_coding retained_intron MGP_129S1SvImJ_T0013270.1 MGP_129S1SvImJ_G0011359.1 mouse_genomes_project 17 38386869 38387527 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0045506.1 MGP_129S1SvImJ_G0023135.1 mouse_genomes_project 17 5909126 5917200 + MGP_129S1SvImJ_P0045506 T protein_coding protein_coding MGP_129S1SvImJ_T0045507.1 MGP_129S1SvImJ_G0023135.1 mouse_genomes_project 17 5909628 5911703 + MGP_129S1SvImJ_P0045507 T protein_coding protein_coding MGP_129S1SvImJ_T0045508.1 MGP_129S1SvImJ_G0023135.1 mouse_genomes_project 17 5910113 5916446 + MGP_129S1SvImJ_P0045508 T protein_coding protein_coding MGP_129S1SvImJ_T0098534.1 MGP_129S1SvImJ_G0036619.1 mouse_genomes_project 17 81353844 81353955 - Gm22562 rRNA rRNA MGP_129S1SvImJ_T0047100.1 MGP_129S1SvImJ_G0023571.1 mouse_genomes_project 17 34364092 34378513 + MGP_129S1SvImJ_P0047100 Btnl2 protein_coding protein_coding MGP_129S1SvImJ_T0047101.1 MGP_129S1SvImJ_G0023571.1 mouse_genomes_project 17 34364092 34378512 + MGP_129S1SvImJ_P0047101 Btnl2 protein_coding protein_coding MGP_129S1SvImJ_T0102281.1 MGP_129S1SvImJ_G0040115.1 mouse_genomes_project 17 16092843 18797452 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0048459.1 MGP_129S1SvImJ_G0023996.1 mouse_genomes_project 17 71479794 71618684 + MGP_129S1SvImJ_P0048459 Epb41l3 protein_coding protein_coding MGP_129S1SvImJ_T0048460.1 MGP_129S1SvImJ_G0023996.1 mouse_genomes_project 17 71479794 71618684 + MGP_129S1SvImJ_P0048460 Epb41l3 protein_coding protein_coding MGP_129S1SvImJ_T0048461.1 MGP_129S1SvImJ_G0023996.1 mouse_genomes_project 17 71530745 71618690 + MGP_129S1SvImJ_P0048461 Epb41l3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048237.1 MGP_129S1SvImJ_G0023910.1 mouse_genomes_project 17 57704684 57712668 - MGP_129S1SvImJ_P0048237 Ubxn6 protein_coding protein_coding MGP_129S1SvImJ_T0048238.1 MGP_129S1SvImJ_G0023910.1 mouse_genomes_project 17 57705889 57712657 - Ubxn6 protein_coding retained_intron MGP_129S1SvImJ_T0048239.1 MGP_129S1SvImJ_G0023910.1 mouse_genomes_project 17 57705889 57709872 - Ubxn6 protein_coding retained_intron MGP_129S1SvImJ_T0048240.1 MGP_129S1SvImJ_G0023910.1 mouse_genomes_project 17 57706175 57707074 - Ubxn6 protein_coding retained_intron MGP_129S1SvImJ_T0048241.1 MGP_129S1SvImJ_G0023910.1 mouse_genomes_project 17 57707277 57710080 - Ubxn6 protein_coding processed_transcript MGP_129S1SvImJ_T0048242.1 MGP_129S1SvImJ_G0023910.1 mouse_genomes_project 17 57707757 57712488 - Ubxn6 protein_coding retained_intron MGP_129S1SvImJ_T0048243.1 MGP_129S1SvImJ_G0023910.1 mouse_genomes_project 17 57708283 57712187 - MGP_129S1SvImJ_P0048243 Ubxn6 protein_coding protein_coding MGP_129S1SvImJ_T0046850.1 MGP_129S1SvImJ_G0023516.1 mouse_genomes_project 17 32816498 32839875 - MGP_129S1SvImJ_P0046850 Cyp4f13 protein_coding protein_coding MGP_129S1SvImJ_T0046851.1 MGP_129S1SvImJ_G0023516.1 mouse_genomes_project 17 32816511 32839852 - MGP_129S1SvImJ_P0046851 Cyp4f13 protein_coding protein_coding MGP_129S1SvImJ_T0046852.1 MGP_129S1SvImJ_G0023516.1 mouse_genomes_project 17 32816526 32839839 - MGP_129S1SvImJ_P0046852 Cyp4f13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046853.1 MGP_129S1SvImJ_G0023516.1 mouse_genomes_project 17 32817142 32817696 - Cyp4f13 protein_coding retained_intron MGP_129S1SvImJ_T0046854.1 MGP_129S1SvImJ_G0023516.1 mouse_genomes_project 17 32824941 32839875 - MGP_129S1SvImJ_P0046854 Cyp4f13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046855.1 MGP_129S1SvImJ_G0023516.1 mouse_genomes_project 17 32825153 32839833 - MGP_129S1SvImJ_P0046855 Cyp4f13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046856.1 MGP_129S1SvImJ_G0023516.1 mouse_genomes_project 17 32832302 32839864 - Cyp4f13 protein_coding retained_intron MGP_129S1SvImJ_T0048378.1 MGP_129S1SvImJ_G0023970.1 mouse_genomes_project 17 65103075 65553367 - MGP_129S1SvImJ_P0048378 Fbxl17 protein_coding protein_coding MGP_129S1SvImJ_T0048379.1 MGP_129S1SvImJ_G0023970.1 mouse_genomes_project 17 65105751 65553367 - MGP_129S1SvImJ_P0048379 Fbxl17 protein_coding protein_coding MGP_129S1SvImJ_T0048380.1 MGP_129S1SvImJ_G0023970.1 mouse_genomes_project 17 65106080 65505940 - Fbxl17 protein_coding processed_transcript MGP_129S1SvImJ_T0048381.1 MGP_129S1SvImJ_G0023970.1 mouse_genomes_project 17 65107236 65501486 - Fbxl17 protein_coding processed_transcript MGP_129S1SvImJ_T0048382.1 MGP_129S1SvImJ_G0023970.1 mouse_genomes_project 17 65442476 65531123 - Fbxl17 protein_coding processed_transcript MGP_129S1SvImJ_T0046723.1 MGP_129S1SvImJ_G0023487.1 mouse_genomes_project 17 31052175 31113318 + MGP_129S1SvImJ_P0046723 Slc37a1 protein_coding protein_coding MGP_129S1SvImJ_T0046724.1 MGP_129S1SvImJ_G0023487.1 mouse_genomes_project 17 31052911 31113318 + MGP_129S1SvImJ_P0046724 Slc37a1 protein_coding protein_coding MGP_129S1SvImJ_T0003804.1 MGP_129S1SvImJ_G0003420.1 mouse_genomes_project 17 71604085 71605932 - 2410021H03Rik antisense antisense MGP_129S1SvImJ_T0013292.1 MGP_129S1SvImJ_G0011381.1 mouse_genomes_project 17 55592386 55593347 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048203.1 MGP_129S1SvImJ_G0023890.1 mouse_genomes_project 17 55242969 55257507 - MGP_129S1SvImJ_P0048203 Sgol1 protein_coding protein_coding MGP_129S1SvImJ_T0048204.1 MGP_129S1SvImJ_G0023890.1 mouse_genomes_project 17 55255734 55257460 - Sgol1 protein_coding processed_transcript MGP_129S1SvImJ_T0048205.1 MGP_129S1SvImJ_G0023890.1 mouse_genomes_project 17 55255881 55257452 - Sgol1 protein_coding processed_transcript MGP_129S1SvImJ_T0048428.1 MGP_129S1SvImJ_G0023986.1 mouse_genomes_project 17 68306767 68337967 + MGP_129S1SvImJ_P0048428 Ddx11 protein_coding protein_coding MGP_129S1SvImJ_T0048429.1 MGP_129S1SvImJ_G0023986.1 mouse_genomes_project 17 68307035 68336723 + MGP_129S1SvImJ_P0048429 Ddx11 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0045890.1 MGP_129S1SvImJ_G0023289.1 mouse_genomes_project 17 23108618 23117797 - Amdhd2 protein_coding retained_intron MGP_129S1SvImJ_T0045891.1 MGP_129S1SvImJ_G0023289.1 mouse_genomes_project 17 23108618 23109525 - Amdhd2 protein_coding processed_transcript MGP_129S1SvImJ_T0045892.1 MGP_129S1SvImJ_G0023289.1 mouse_genomes_project 17 23108618 23117833 - MGP_129S1SvImJ_P0045892 Amdhd2 protein_coding protein_coding MGP_129S1SvImJ_T0045893.1 MGP_129S1SvImJ_G0023289.1 mouse_genomes_project 17 23108620 23110378 - MGP_129S1SvImJ_P0045893 Amdhd2 protein_coding protein_coding MGP_129S1SvImJ_T0045894.1 MGP_129S1SvImJ_G0023289.1 mouse_genomes_project 17 23111127 23117377 - MGP_129S1SvImJ_P0045894 Amdhd2 protein_coding protein_coding MGP_129S1SvImJ_T0045895.1 MGP_129S1SvImJ_G0023289.1 mouse_genomes_project 17 23115032 23117760 - Amdhd2 protein_coding retained_intron MGP_129S1SvImJ_T0047969.1 MGP_129S1SvImJ_G0023822.1 mouse_genomes_project 17 47706382 47722405 - MGP_129S1SvImJ_P0047969 Klc4 protein_coding protein_coding MGP_129S1SvImJ_T0047891.1 MGP_129S1SvImJ_G0023803.1 mouse_genomes_project 17 47192286 47199613 - MGP_129S1SvImJ_P0047891 Mad2l1bp protein_coding protein_coding MGP_129S1SvImJ_T0047022.1 MGP_129S1SvImJ_G0023553.1 mouse_genomes_project 17 33997705 34001129 - MGP_129S1SvImJ_P0047022 Slc39a7 protein_coding protein_coding MGP_129S1SvImJ_T0047023.1 MGP_129S1SvImJ_G0023553.1 mouse_genomes_project 17 33997707 34000983 - MGP_129S1SvImJ_P0047023 Slc39a7 protein_coding protein_coding MGP_129S1SvImJ_T0047024.1 MGP_129S1SvImJ_G0023553.1 mouse_genomes_project 17 33997711 34001087 - Slc39a7 protein_coding retained_intron MGP_129S1SvImJ_T0047025.1 MGP_129S1SvImJ_G0023553.1 mouse_genomes_project 17 33999284 34000467 - Slc39a7 protein_coding retained_intron MGP_129S1SvImJ_T0047026.1 MGP_129S1SvImJ_G0023553.1 mouse_genomes_project 17 33999612 34001095 - MGP_129S1SvImJ_P0047026 Slc39a7 protein_coding protein_coding MGP_129S1SvImJ_T0047027.1 MGP_129S1SvImJ_G0023553.1 mouse_genomes_project 17 34000031 34001121 - Slc39a7 protein_coding processed_transcript MGP_129S1SvImJ_T0013297.1 MGP_129S1SvImJ_G0011386.1 mouse_genomes_project 17 65735396 65735956 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098332.1 MGP_129S1SvImJ_G0036417.1 mouse_genomes_project 17 38005922 38006886 - pseudogene pseudogene MGP_129S1SvImJ_T0006924.1 MGP_129S1SvImJ_G0005706.1 mouse_genomes_project 17 26456759 26458799 + Gm26724 lincRNA lincRNA MGP_129S1SvImJ_T0045995.1 MGP_129S1SvImJ_G0023314.1 mouse_genomes_project 17 23704503 23706907 - MGP_129S1SvImJ_P0045995 Gfer protein_coding protein_coding MGP_129S1SvImJ_T0047129.1 MGP_129S1SvImJ_G0023577.1 mouse_genomes_project 17 34662728 34664677 + MGP_129S1SvImJ_P0047129 Gpsm3 protein_coding protein_coding MGP_129S1SvImJ_T0047130.1 MGP_129S1SvImJ_G0023577.1 mouse_genomes_project 17 34663014 34664677 + MGP_129S1SvImJ_P0047130 Gpsm3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047131.1 MGP_129S1SvImJ_G0023577.1 mouse_genomes_project 17 34663153 34664563 + MGP_129S1SvImJ_P0047131 Gpsm3 protein_coding protein_coding MGP_129S1SvImJ_T0048763.1 MGP_129S1SvImJ_G0024102.1 mouse_genomes_project 17 90775455 90818553 - MGP_129S1SvImJ_P0048763 1700011E24Rik protein_coding protein_coding MGP_129S1SvImJ_T0048764.1 MGP_129S1SvImJ_G0024102.1 mouse_genomes_project 17 90775460 90818499 - MGP_129S1SvImJ_P0048764 1700011E24Rik protein_coding protein_coding MGP_129S1SvImJ_T0048765.1 MGP_129S1SvImJ_G0024102.1 mouse_genomes_project 17 90802323 90818520 - MGP_129S1SvImJ_P0048765 1700011E24Rik protein_coding protein_coding MGP_129S1SvImJ_T0048766.1 MGP_129S1SvImJ_G0024102.1 mouse_genomes_project 17 90808515 90818447 - 1700011E24Rik protein_coding processed_transcript MGP_129S1SvImJ_T0048767.1 MGP_129S1SvImJ_G0024102.1 mouse_genomes_project 17 90808525 90818447 - 1700011E24Rik protein_coding processed_transcript MGP_129S1SvImJ_T0013301.1 MGP_129S1SvImJ_G0011390.1 mouse_genomes_project 17 72744056 72744500 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0045536.1 MGP_129S1SvImJ_G0023143.1 mouse_genomes_project 17 9757640 9855182 + MGP_129S1SvImJ_P0045536 Agpat4 protein_coding protein_coding MGP_129S1SvImJ_T0045537.1 MGP_129S1SvImJ_G0023143.1 mouse_genomes_project 17 9758243 9864085 + MGP_129S1SvImJ_P0045537 Agpat4 protein_coding protein_coding MGP_129S1SvImJ_T0045538.1 MGP_129S1SvImJ_G0023143.1 mouse_genomes_project 17 9758265 9783294 + Agpat4 protein_coding processed_transcript MGP_129S1SvImJ_T0045539.1 MGP_129S1SvImJ_G0023143.1 mouse_genomes_project 17 9776873 9854833 + MGP_129S1SvImJ_P0045539 Agpat4 protein_coding protein_coding MGP_129S1SvImJ_T0045540.1 MGP_129S1SvImJ_G0023143.1 mouse_genomes_project 17 9795389 9863533 + MGP_129S1SvImJ_P0045540 Agpat4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045541.1 MGP_129S1SvImJ_G0023143.1 mouse_genomes_project 17 9859594 9863707 + Agpat4 protein_coding retained_intron MGP_129S1SvImJ_T0003732.1 MGP_129S1SvImJ_G0003369.1 mouse_genomes_project 17 8097262 8168988 + Gm16168 antisense antisense MGP_129S1SvImJ_T0003733.1 MGP_129S1SvImJ_G0003369.1 mouse_genomes_project 17 8097269 8152796 + Gm16168 antisense antisense MGP_129S1SvImJ_T0048702.1 MGP_129S1SvImJ_G0024078.1 mouse_genomes_project 17 87334014 87626893 - MGP_129S1SvImJ_P0048702 Thada protein_coding protein_coding MGP_129S1SvImJ_T0102334.1 MGP_129S1SvImJ_G0040168.1 mouse_genomes_project 17 36440395 36503515 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0045414.1 MGP_129S1SvImJ_G0023106.1 mouse_genomes_project 17 2600371 2896609 + MGP_129S1SvImJ_P0045414 Zdhhc14 protein_coding protein_coding MGP_129S1SvImJ_T0048359.1 MGP_129S1SvImJ_G0023962.1 mouse_genomes_project 17 59059031 59116294 + MGP_129S1SvImJ_P0048359 Vav1 protein_coding protein_coding MGP_129S1SvImJ_T0048360.1 MGP_129S1SvImJ_G0023962.1 mouse_genomes_project 17 59059031 59116375 + MGP_129S1SvImJ_P0048360 Vav1 protein_coding protein_coding MGP_129S1SvImJ_T0048361.1 MGP_129S1SvImJ_G0023962.1 mouse_genomes_project 17 59059058 59116299 + MGP_129S1SvImJ_P0048361 Vav1 protein_coding protein_coding MGP_129S1SvImJ_T0048362.1 MGP_129S1SvImJ_G0023962.1 mouse_genomes_project 17 59085088 59089223 + Vav1 protein_coding retained_intron MGP_129S1SvImJ_T0048363.1 MGP_129S1SvImJ_G0023962.1 mouse_genomes_project 17 59100319 59116297 + Vav1 protein_coding processed_transcript MGP_129S1SvImJ_T0102340.1 MGP_129S1SvImJ_G0040174.1 mouse_genomes_project 17 36769084 36771193 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0047768.1 MGP_129S1SvImJ_G0023773.1 mouse_genomes_project 17 44269850 44343775 + MGP_129S1SvImJ_P0047768 Adgrf5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0047769.1 MGP_129S1SvImJ_G0023773.1 mouse_genomes_project 17 44269878 44343773 + MGP_129S1SvImJ_P0047769 Adgrf5 protein_coding protein_coding MGP_129S1SvImJ_T0047206.1 MGP_129S1SvImJ_G0023591.1 mouse_genomes_project 17 34951044 34962027 - Skiv2l protein_coding retained_intron MGP_129S1SvImJ_T0047207.1 MGP_129S1SvImJ_G0023591.1 mouse_genomes_project 17 34951060 34962027 - MGP_129S1SvImJ_P0047207 Skiv2l protein_coding protein_coding MGP_129S1SvImJ_T0047208.1 MGP_129S1SvImJ_G0023591.1 mouse_genomes_project 17 34951065 34962009 - Skiv2l protein_coding retained_intron MGP_129S1SvImJ_T0047209.1 MGP_129S1SvImJ_G0023591.1 mouse_genomes_project 17 34951113 34962015 - Skiv2l protein_coding retained_intron MGP_129S1SvImJ_T0047210.1 MGP_129S1SvImJ_G0023591.1 mouse_genomes_project 17 34952346 34952945 - Skiv2l protein_coding retained_intron MGP_129S1SvImJ_T0047211.1 MGP_129S1SvImJ_G0023591.1 mouse_genomes_project 17 34952418 34954682 - MGP_129S1SvImJ_P0047211 Skiv2l protein_coding protein_coding MGP_129S1SvImJ_T0047212.1 MGP_129S1SvImJ_G0023591.1 mouse_genomes_project 17 34953172 34956273 - Skiv2l protein_coding retained_intron MGP_129S1SvImJ_T0047213.1 MGP_129S1SvImJ_G0023591.1 mouse_genomes_project 17 34956843 34959010 - Skiv2l protein_coding retained_intron MGP_129S1SvImJ_T0047214.1 MGP_129S1SvImJ_G0023591.1 mouse_genomes_project 17 34956920 34958456 - Skiv2l protein_coding retained_intron MGP_129S1SvImJ_T0047215.1 MGP_129S1SvImJ_G0023591.1 mouse_genomes_project 17 34957056 34957848 - Skiv2l protein_coding retained_intron MGP_129S1SvImJ_T0047216.1 MGP_129S1SvImJ_G0023591.1 mouse_genomes_project 17 34958338 34962012 - MGP_129S1SvImJ_P0047216 Skiv2l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0098845.1 MGP_129S1SvImJ_G0036924.1 mouse_genomes_project 17 76203753 76208381 - D630014O11Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0010212.1 MGP_129S1SvImJ_G0008328.1 mouse_genomes_project 17 27939547 27939673 + Gm25195 miRNA miRNA MGP_129S1SvImJ_T0046642.1 MGP_129S1SvImJ_G0023462.1 mouse_genomes_project 17 28842902 28854424 + Pi16 protein_coding retained_intron MGP_129S1SvImJ_T0046643.1 MGP_129S1SvImJ_G0023462.1 mouse_genomes_project 17 28843222 28854431 + MGP_129S1SvImJ_P0046643 Pi16 protein_coding protein_coding MGP_129S1SvImJ_T0046644.1 MGP_129S1SvImJ_G0023462.1 mouse_genomes_project 17 28843240 28854437 + MGP_129S1SvImJ_P0046644 Pi16 protein_coding protein_coding MGP_129S1SvImJ_T0048209.1 MGP_129S1SvImJ_G0023894.1 mouse_genomes_project 17 56793349 56794200 + MGP_129S1SvImJ_P0048209 protein_coding protein_coding MGP_129S1SvImJ_T0045493.1 MGP_129S1SvImJ_G0023132.1 mouse_genomes_project 17 5782345 5798693 + Sft2d1 protein_coding retained_intron MGP_129S1SvImJ_T0045494.1 MGP_129S1SvImJ_G0023132.1 mouse_genomes_project 17 5782345 5798693 + MGP_129S1SvImJ_P0045494 Sft2d1 protein_coding protein_coding MGP_129S1SvImJ_T0045495.1 MGP_129S1SvImJ_G0023132.1 mouse_genomes_project 17 5782352 5866657 + Sft2d1 protein_coding processed_transcript MGP_129S1SvImJ_T0045496.1 MGP_129S1SvImJ_G0023132.1 mouse_genomes_project 17 5782365 5798306 + MGP_129S1SvImJ_P0045496 Sft2d1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045497.1 MGP_129S1SvImJ_G0023132.1 mouse_genomes_project 17 5782382 5798259 + Sft2d1 protein_coding processed_transcript MGP_129S1SvImJ_T0045498.1 MGP_129S1SvImJ_G0023132.1 mouse_genomes_project 17 5782412 5798691 + MGP_129S1SvImJ_P0045498 Sft2d1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045499.1 MGP_129S1SvImJ_G0023132.1 mouse_genomes_project 17 5782418 5789452 + Sft2d1 protein_coding retained_intron MGP_129S1SvImJ_T0045501.1 MGP_129S1SvImJ_G0023132.1 mouse_genomes_project 17 5789972 5795705 + Sft2d1 protein_coding retained_intron MGP_129S1SvImJ_T0045502.1 MGP_129S1SvImJ_G0023132.1 mouse_genomes_project 17 5791791 5798313 + Sft2d1 protein_coding retained_intron MGP_129S1SvImJ_T0045503.1 MGP_129S1SvImJ_G0023132.1 mouse_genomes_project 17 5795627 5798691 + Sft2d1 protein_coding retained_intron MGP_129S1SvImJ_T0046281.1 MGP_129S1SvImJ_G0023381.1 mouse_genomes_project 17 24989873 25029973 - MGP_129S1SvImJ_P0046281 Rab40c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046282.1 MGP_129S1SvImJ_G0023381.1 mouse_genomes_project 17 24989873 25030069 - MGP_129S1SvImJ_P0046282 Rab40c protein_coding protein_coding MGP_129S1SvImJ_T0046283.1 MGP_129S1SvImJ_G0023381.1 mouse_genomes_project 17 24989873 25030059 - MGP_129S1SvImJ_P0046283 Rab40c protein_coding protein_coding MGP_129S1SvImJ_T0046284.1 MGP_129S1SvImJ_G0023381.1 mouse_genomes_project 17 24989873 25030146 - MGP_129S1SvImJ_P0046284 Rab40c protein_coding protein_coding MGP_129S1SvImJ_T0046285.1 MGP_129S1SvImJ_G0023381.1 mouse_genomes_project 17 24989876 25024049 - Rab40c protein_coding processed_transcript MGP_129S1SvImJ_T0046286.1 MGP_129S1SvImJ_G0023381.1 mouse_genomes_project 17 24991387 25029923 - MGP_129S1SvImJ_P0046286 Rab40c protein_coding protein_coding MGP_129S1SvImJ_T0046287.1 MGP_129S1SvImJ_G0023381.1 mouse_genomes_project 17 24991398 25030159 - MGP_129S1SvImJ_P0046287 Rab40c protein_coding protein_coding MGP_129S1SvImJ_T0046288.1 MGP_129S1SvImJ_G0023381.1 mouse_genomes_project 17 24992522 25030107 - Rab40c protein_coding processed_transcript MGP_129S1SvImJ_T0046289.1 MGP_129S1SvImJ_G0023381.1 mouse_genomes_project 17 24992841 25030143 - MGP_129S1SvImJ_P0046289 Rab40c protein_coding protein_coding MGP_129S1SvImJ_T0046224.1 MGP_129S1SvImJ_G0023368.1 mouse_genomes_project 17 24886564 24888339 - MGP_129S1SvImJ_P0046224 Fam173a protein_coding protein_coding MGP_129S1SvImJ_T0048426.1 MGP_129S1SvImJ_G0023985.1 mouse_genomes_project 17 68294186 68303751 + MGP_129S1SvImJ_P0048426 Wash1 protein_coding protein_coding MGP_129S1SvImJ_T0048427.1 MGP_129S1SvImJ_G0023985.1 mouse_genomes_project 17 68294285 68303751 + MGP_129S1SvImJ_P0048427 Wash1 protein_coding protein_coding MGP_129S1SvImJ_T0011459.1 MGP_129S1SvImJ_G0009575.1 mouse_genomes_project 17 88867965 88868039 + Gm27610 misc_RNA misc_RNA MGP_129S1SvImJ_T0045700.1 MGP_129S1SvImJ_G0023199.1 mouse_genomes_project 17 17924182 17957774 + MGP_129S1SvImJ_P0045700 Vmn2r100 protein_coding protein_coding MGP_129S1SvImJ_T0013242.1 MGP_129S1SvImJ_G0011331.1 mouse_genomes_project 17 20742559 20743301 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0046892.1 MGP_129S1SvImJ_G0023530.1 mouse_genomes_project 17 33474491 33529542 + MGP_129S1SvImJ_P0046892 Myo1f protein_coding protein_coding MGP_129S1SvImJ_T0046893.1 MGP_129S1SvImJ_G0023530.1 mouse_genomes_project 17 33474517 33529538 + MGP_129S1SvImJ_P0046893 Myo1f protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046894.1 MGP_129S1SvImJ_G0023530.1 mouse_genomes_project 17 33474537 33495147 + MGP_129S1SvImJ_P0046894 Myo1f protein_coding protein_coding MGP_129S1SvImJ_T0046895.1 MGP_129S1SvImJ_G0023530.1 mouse_genomes_project 17 33500123 33529544 + Myo1f protein_coding retained_intron MGP_129S1SvImJ_T0045415.1 MGP_129S1SvImJ_G0023107.1 mouse_genomes_project 17 2990448 3078739 + MGP_129S1SvImJ_P0045415 Snx9 protein_coding protein_coding MGP_129S1SvImJ_T0048644.1 MGP_129S1SvImJ_G0024051.1 mouse_genomes_project 17 82487632 82549241 + MGP_129S1SvImJ_P0048644 Rmdn2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0046879.1 MGP_129S1SvImJ_G0023528.1 mouse_genomes_project 17 33348250 33349623 + MGP_129S1SvImJ_P0046879 Actl9 protein_coding protein_coding MGP_129S1SvImJ_T0003750.1 MGP_129S1SvImJ_G0003380.1 mouse_genomes_project 17 26348554 26350324 - Itpr3os antisense antisense MGP_129S1SvImJ_T0100820.1 MGP_129S1SvImJ_G0038887.1 mouse_genomes_project 17 23733467 23733595 - Snora78 snoRNA snoRNA MGP_129S1SvImJ_T0048247.1 MGP_129S1SvImJ_G0023913.1 mouse_genomes_project 17 57756243 57762239 - MGP_129S1SvImJ_P0048247 Plin5 protein_coding protein_coding MGP_129S1SvImJ_T0048248.1 MGP_129S1SvImJ_G0023913.1 mouse_genomes_project 17 57756249 57761941 - MGP_129S1SvImJ_P0048248 Plin5 protein_coding protein_coding MGP_129S1SvImJ_T0046840.1 MGP_129S1SvImJ_G0023512.1 mouse_genomes_project 17 32677301 32692770 - MGP_129S1SvImJ_P0046840 Zfp811 protein_coding protein_coding MGP_129S1SvImJ_T0046841.1 MGP_129S1SvImJ_G0023512.1 mouse_genomes_project 17 32679584 32683117 - MGP_129S1SvImJ_P0046841 Zfp811 protein_coding protein_coding MGP_129S1SvImJ_T0047562.1 MGP_129S1SvImJ_G0023664.1 mouse_genomes_project 17 36191063 36200782 - MGP_129S1SvImJ_P0047562 Prr3 protein_coding protein_coding MGP_129S1SvImJ_T0047563.1 MGP_129S1SvImJ_G0023664.1 mouse_genomes_project 17 36193668 36200218 - MGP_129S1SvImJ_P0047563 Prr3 protein_coding protein_coding MGP_129S1SvImJ_T0047564.1 MGP_129S1SvImJ_G0023664.1 mouse_genomes_project 17 36198451 36200140 - MGP_129S1SvImJ_P0047564 Prr3 protein_coding protein_coding MGP_129S1SvImJ_T0047565.1 MGP_129S1SvImJ_G0023664.1 mouse_genomes_project 17 36198687 36200500 - MGP_129S1SvImJ_P0047565 Prr3 protein_coding protein_coding MGP_129S1SvImJ_T0047566.1 MGP_129S1SvImJ_G0023664.1 mouse_genomes_project 17 36198855 36200500 - MGP_129S1SvImJ_P0047566 Prr3 protein_coding protein_coding MGP_129S1SvImJ_T0047567.1 MGP_129S1SvImJ_G0023664.1 mouse_genomes_project 17 36199110 36200371 - MGP_129S1SvImJ_P0047567 Prr3 protein_coding protein_coding MGP_129S1SvImJ_T0047568.1 MGP_129S1SvImJ_G0023664.1 mouse_genomes_project 17 36199221 36199991 - Prr3 protein_coding retained_intron MGP_129S1SvImJ_T0048480.1 MGP_129S1SvImJ_G0024000.1 mouse_genomes_project 17 73253426 73259011 - MGP_129S1SvImJ_P0048480 Tgif1 protein_coding protein_coding MGP_129S1SvImJ_T0048481.1 MGP_129S1SvImJ_G0024000.1 mouse_genomes_project 17 73253426 73260423 - MGP_129S1SvImJ_P0048481 Tgif1 protein_coding protein_coding MGP_129S1SvImJ_T0048482.1 MGP_129S1SvImJ_G0024000.1 mouse_genomes_project 17 73253432 73260285 - MGP_129S1SvImJ_P0048482 Tgif1 protein_coding protein_coding MGP_129S1SvImJ_T0048483.1 MGP_129S1SvImJ_G0024000.1 mouse_genomes_project 17 73253432 73263737 - MGP_129S1SvImJ_P0048483 Tgif1 protein_coding protein_coding MGP_129S1SvImJ_T0048484.1 MGP_129S1SvImJ_G0024000.1 mouse_genomes_project 17 73253432 73261803 - MGP_129S1SvImJ_P0048484 Tgif1 protein_coding protein_coding MGP_129S1SvImJ_T0048485.1 MGP_129S1SvImJ_G0024000.1 mouse_genomes_project 17 73253949 73259011 - MGP_129S1SvImJ_P0048485 Tgif1 protein_coding protein_coding MGP_129S1SvImJ_T0048486.1 MGP_129S1SvImJ_G0024000.1 mouse_genomes_project 17 73254090 73255548 - MGP_129S1SvImJ_P0048486 Tgif1 protein_coding protein_coding MGP_129S1SvImJ_T0048487.1 MGP_129S1SvImJ_G0024000.1 mouse_genomes_project 17 73254202 73256392 - MGP_129S1SvImJ_P0048487 Tgif1 protein_coding protein_coding MGP_129S1SvImJ_T0048488.1 MGP_129S1SvImJ_G0024000.1 mouse_genomes_project 17 73255402 73258865 - MGP_129S1SvImJ_P0048488 Tgif1 protein_coding protein_coding MGP_129S1SvImJ_T0048489.1 MGP_129S1SvImJ_G0024000.1 mouse_genomes_project 17 73255516 73260347 - Tgif1 protein_coding processed_transcript MGP_129S1SvImJ_T0048490.1 MGP_129S1SvImJ_G0024000.1 mouse_genomes_project 17 73255891 73259035 - Tgif1 protein_coding retained_intron MGP_129S1SvImJ_T0048491.1 MGP_129S1SvImJ_G0024000.1 mouse_genomes_project 17 73257594 73259028 - Tgif1 protein_coding processed_transcript MGP_129S1SvImJ_T0046031.1 MGP_129S1SvImJ_G0023324.1 mouse_genomes_project 17 23874558 23875964 - MGP_129S1SvImJ_P0046031 Fahd1 protein_coding protein_coding MGP_129S1SvImJ_T0006907.1 MGP_129S1SvImJ_G0005691.1 mouse_genomes_project 17 9963902 9972285 + 4732491K20Rik lincRNA lincRNA MGP_129S1SvImJ_T0047413.1 MGP_129S1SvImJ_G0023638.1 mouse_genomes_project 17 35605619 35613953 + MGP_129S1SvImJ_P0047413 H2-Q6 protein_coding protein_coding MGP_129S1SvImJ_T0006928.1 MGP_129S1SvImJ_G0005710.1 mouse_genomes_project 17 27936472 27938563 + E230001N04Rik lincRNA lincRNA MGP_129S1SvImJ_T0006929.1 MGP_129S1SvImJ_G0005710.1 mouse_genomes_project 17 27936508 27938563 + E230001N04Rik lincRNA lincRNA MGP_129S1SvImJ_T0047383.1 MGP_129S1SvImJ_G0023626.1 mouse_genomes_project 17 35332819 35336009 - MGP_129S1SvImJ_P0047383 Lst1 protein_coding protein_coding MGP_129S1SvImJ_T0048649.1 MGP_129S1SvImJ_G0024055.1 mouse_genomes_project 17 82915791 82949272 - MGP_129S1SvImJ_P0048649 Hnrnpll protein_coding protein_coding MGP_129S1SvImJ_T0048650.1 MGP_129S1SvImJ_G0024055.1 mouse_genomes_project 17 82915791 82949165 - MGP_129S1SvImJ_P0048650 Hnrnpll protein_coding protein_coding MGP_129S1SvImJ_T0048651.1 MGP_129S1SvImJ_G0024055.1 mouse_genomes_project 17 82916141 82949165 - MGP_129S1SvImJ_P0048651 Hnrnpll protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048652.1 MGP_129S1SvImJ_G0024055.1 mouse_genomes_project 17 82916645 82921861 - Hnrnpll protein_coding retained_intron MGP_129S1SvImJ_T0048653.1 MGP_129S1SvImJ_G0024055.1 mouse_genomes_project 17 82923453 82949132 - Hnrnpll protein_coding retained_intron MGP_129S1SvImJ_T0048654.1 MGP_129S1SvImJ_G0024055.1 mouse_genomes_project 17 82931562 82949073 - Hnrnpll protein_coding retained_intron MGP_129S1SvImJ_T0048655.1 MGP_129S1SvImJ_G0024055.1 mouse_genomes_project 17 82937748 82949206 - Hnrnpll protein_coding retained_intron MGP_129S1SvImJ_T0045479.1 MGP_129S1SvImJ_G0023130.1 mouse_genomes_project 17 5701053 5724007 + MGP_129S1SvImJ_P0045479 Ccr6 protein_coding protein_coding MGP_129S1SvImJ_T0045480.1 MGP_129S1SvImJ_G0023130.1 mouse_genomes_project 17 5707337 5724007 + MGP_129S1SvImJ_P0045480 Ccr6 protein_coding protein_coding MGP_129S1SvImJ_T0045481.1 MGP_129S1SvImJ_G0023130.1 mouse_genomes_project 17 5708621 5724007 + MGP_129S1SvImJ_P0045481 Ccr6 protein_coding protein_coding MGP_129S1SvImJ_T0045482.1 MGP_129S1SvImJ_G0023130.1 mouse_genomes_project 17 5708621 5724007 + MGP_129S1SvImJ_P0045482 Ccr6 protein_coding protein_coding MGP_129S1SvImJ_T0045483.1 MGP_129S1SvImJ_G0023130.1 mouse_genomes_project 17 5708621 5724007 + MGP_129S1SvImJ_P0045483 Ccr6 protein_coding protein_coding MGP_129S1SvImJ_T0045484.1 MGP_129S1SvImJ_G0023130.1 mouse_genomes_project 17 5708621 5724007 + MGP_129S1SvImJ_P0045484 Ccr6 protein_coding protein_coding MGP_129S1SvImJ_T0048028.1 MGP_129S1SvImJ_G0023846.1 mouse_genomes_project 17 48650580 48671566 - MGP_129S1SvImJ_P0048028 Taf8 protein_coding protein_coding MGP_129S1SvImJ_T0047087.1 MGP_129S1SvImJ_G0023566.1 mouse_genomes_project 17 34241210 34249719 + MGP_129S1SvImJ_P0047087 H2-Ob protein_coding protein_coding MGP_129S1SvImJ_T0047088.1 MGP_129S1SvImJ_G0023566.1 mouse_genomes_project 17 34241212 34245316 + H2-Ob protein_coding retained_intron MGP_129S1SvImJ_T0047089.1 MGP_129S1SvImJ_G0023566.1 mouse_genomes_project 17 34241238 34249610 + MGP_129S1SvImJ_P0047089 H2-Ob protein_coding protein_coding MGP_129S1SvImJ_T0047090.1 MGP_129S1SvImJ_G0023566.1 mouse_genomes_project 17 34243847 34248272 + MGP_129S1SvImJ_P0047090 H2-Ob protein_coding protein_coding MGP_129S1SvImJ_T0003808.1 MGP_129S1SvImJ_G0003424.1 mouse_genomes_project 17 88872631 88874287 - Gm28528 antisense antisense MGP_129S1SvImJ_T0048321.1 MGP_129S1SvImJ_G0023941.1 mouse_genomes_project 17 58575195 58610464 - MGP_129S1SvImJ_P0048321 Acsbg2 protein_coding protein_coding MGP_129S1SvImJ_T0046834.1 MGP_129S1SvImJ_G0023510.1 mouse_genomes_project 17 32557136 32575069 + MGP_129S1SvImJ_P0046834 Cyp4f15 protein_coding protein_coding MGP_129S1SvImJ_T0046835.1 MGP_129S1SvImJ_G0023510.1 mouse_genomes_project 17 32557177 32561794 + Cyp4f15 protein_coding retained_intron MGP_129S1SvImJ_T0046836.1 MGP_129S1SvImJ_G0023510.1 mouse_genomes_project 17 32557180 32568695 + Cyp4f15 protein_coding processed_transcript MGP_129S1SvImJ_T0046837.1 MGP_129S1SvImJ_G0023510.1 mouse_genomes_project 17 32557188 32575069 + MGP_129S1SvImJ_P0046837 Cyp4f15 protein_coding protein_coding MGP_129S1SvImJ_T0099545.1 MGP_129S1SvImJ_G0037612.1 mouse_genomes_project 17 11119963 11120128 - Gm26057 snRNA snRNA MGP_129S1SvImJ_T0046204.1 MGP_129S1SvImJ_G0023364.1 mouse_genomes_project 17 24843381 24849087 - MGP_129S1SvImJ_P0046204 Msln protein_coding protein_coding MGP_129S1SvImJ_T0099582.1 MGP_129S1SvImJ_G0037649.1 mouse_genomes_project 17 91825972 91826067 - Gm22542 snRNA snRNA MGP_129S1SvImJ_T0045519.1 MGP_129S1SvImJ_G0023138.1 mouse_genomes_project 17 6487862 6507595 + MGP_129S1SvImJ_P0045519 1700010I14Rik protein_coding protein_coding MGP_129S1SvImJ_T0045520.1 MGP_129S1SvImJ_G0023138.1 mouse_genomes_project 17 6487886 6507594 + MGP_129S1SvImJ_P0045520 1700010I14Rik protein_coding protein_coding MGP_129S1SvImJ_T0045521.1 MGP_129S1SvImJ_G0023138.1 mouse_genomes_project 17 6487912 6504533 + 1700010I14Rik protein_coding processed_transcript MGP_129S1SvImJ_T0048216.1 MGP_129S1SvImJ_G0023898.1 mouse_genomes_project 17 57364662 57461792 + MGP_129S1SvImJ_P0048216 Adgre4 protein_coding protein_coding MGP_129S1SvImJ_T0045989.1 MGP_129S1SvImJ_G0023310.1 mouse_genomes_project 17 23634745 23647243 - MGP_129S1SvImJ_P0045989 Slc9a3r2 protein_coding protein_coding MGP_129S1SvImJ_T0045990.1 MGP_129S1SvImJ_G0023310.1 mouse_genomes_project 17 23634745 23641938 - MGP_129S1SvImJ_P0045990 Slc9a3r2 protein_coding protein_coding MGP_129S1SvImJ_T0048208.1 MGP_129S1SvImJ_G0023893.1 mouse_genomes_project 17 55876820 55902824 - MGP_129S1SvImJ_P0048208 Slc5a7 protein_coding protein_coding MGP_129S1SvImJ_T0046579.1 MGP_129S1SvImJ_G0023449.1 mouse_genomes_project 17 28221594 28231865 + MGP_129S1SvImJ_P0046579 Mapk13 protein_coding protein_coding MGP_129S1SvImJ_T0046580.1 MGP_129S1SvImJ_G0023449.1 mouse_genomes_project 17 28221623 28231386 + Mapk13 protein_coding retained_intron MGP_129S1SvImJ_T0046581.1 MGP_129S1SvImJ_G0023449.1 mouse_genomes_project 17 28221636 28231713 + MGP_129S1SvImJ_P0046581 Mapk13 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046582.1 MGP_129S1SvImJ_G0023449.1 mouse_genomes_project 17 28221659 28230729 + Mapk13 protein_coding retained_intron MGP_129S1SvImJ_T0102350.1 MGP_129S1SvImJ_G0040184.1 mouse_genomes_project 17 37071263 37071591 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0006960.1 MGP_129S1SvImJ_G0005735.1 mouse_genomes_project 17 46438436 46448118 + B230354K17Rik lincRNA lincRNA MGP_129S1SvImJ_T0046597.1 MGP_129S1SvImJ_G0023454.1 mouse_genomes_project 17 28440484 28452646 + MGP_129S1SvImJ_P0046597 Kctd20 protein_coding protein_coding MGP_129S1SvImJ_T0046598.1 MGP_129S1SvImJ_G0023454.1 mouse_genomes_project 17 28440970 28458059 + MGP_129S1SvImJ_P0046598 Kctd20 protein_coding protein_coding MGP_129S1SvImJ_T0046599.1 MGP_129S1SvImJ_G0023454.1 mouse_genomes_project 17 28441000 28456453 + MGP_129S1SvImJ_P0046599 Kctd20 protein_coding protein_coding MGP_129S1SvImJ_T0046600.1 MGP_129S1SvImJ_G0023454.1 mouse_genomes_project 17 28441037 28455616 + Kctd20 protein_coding processed_transcript MGP_129S1SvImJ_T0046601.1 MGP_129S1SvImJ_G0023454.1 mouse_genomes_project 17 28441133 28456453 + MGP_129S1SvImJ_P0046601 Kctd20 protein_coding protein_coding MGP_129S1SvImJ_T0046602.1 MGP_129S1SvImJ_G0023454.1 mouse_genomes_project 17 28441222 28453603 + MGP_129S1SvImJ_P0046602 Kctd20 protein_coding protein_coding MGP_129S1SvImJ_T0046603.1 MGP_129S1SvImJ_G0023454.1 mouse_genomes_project 17 28441750 28456461 + MGP_129S1SvImJ_P0046603 Kctd20 protein_coding protein_coding MGP_129S1SvImJ_T0046604.1 MGP_129S1SvImJ_G0023454.1 mouse_genomes_project 17 28441750 28456459 + MGP_129S1SvImJ_P0046604 Kctd20 protein_coding protein_coding MGP_129S1SvImJ_T0046713.1 MGP_129S1SvImJ_G0023482.1 mouse_genomes_project 17 30881089 30884206 - MGP_129S1SvImJ_P0046713 Tff2 protein_coding protein_coding MGP_129S1SvImJ_T0003774.1 MGP_129S1SvImJ_G0003397.1 mouse_genomes_project 17 35263895 35267852 - Gm20522 antisense antisense MGP_129S1SvImJ_T0047038.1 MGP_129S1SvImJ_G0023555.1 mouse_genomes_project 17 34008875 34036079 + MGP_129S1SvImJ_P0047038 Col11a2 protein_coding protein_coding MGP_129S1SvImJ_T0047039.1 MGP_129S1SvImJ_G0023555.1 mouse_genomes_project 17 34008875 34035636 + MGP_129S1SvImJ_P0047039 Col11a2 protein_coding protein_coding MGP_129S1SvImJ_T0047040.1 MGP_129S1SvImJ_G0023555.1 mouse_genomes_project 17 34008875 34035636 + MGP_129S1SvImJ_P0047040 Col11a2 protein_coding protein_coding MGP_129S1SvImJ_T0047041.1 MGP_129S1SvImJ_G0023555.1 mouse_genomes_project 17 34008875 34021908 + MGP_129S1SvImJ_P0047041 Col11a2 protein_coding protein_coding MGP_129S1SvImJ_T0047042.1 MGP_129S1SvImJ_G0023555.1 mouse_genomes_project 17 34017670 34029346 + MGP_129S1SvImJ_P0047042 Col11a2 protein_coding protein_coding MGP_129S1SvImJ_T0047043.1 MGP_129S1SvImJ_G0023555.1 mouse_genomes_project 17 34021697 34023720 + Col11a2 protein_coding processed_transcript MGP_129S1SvImJ_T0047044.1 MGP_129S1SvImJ_G0023555.1 mouse_genomes_project 17 34024471 34025835 + Col11a2 protein_coding retained_intron MGP_129S1SvImJ_T0047045.1 MGP_129S1SvImJ_G0023555.1 mouse_genomes_project 17 34031814 34034187 + Col11a2 protein_coding retained_intron MGP_129S1SvImJ_T0045759.1 MGP_129S1SvImJ_G0023242.1 mouse_genomes_project 17 20735159 20768457 + MGP_129S1SvImJ_P0045759 Zfp943 protein_coding protein_coding MGP_129S1SvImJ_T0045760.1 MGP_129S1SvImJ_G0023242.1 mouse_genomes_project 17 20735166 20766135 + MGP_129S1SvImJ_P0045760 Zfp943 protein_coding protein_coding MGP_129S1SvImJ_T0045761.1 MGP_129S1SvImJ_G0023242.1 mouse_genomes_project 17 20735193 20852431 + MGP_129S1SvImJ_P0045761 Zfp943 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045762.1 MGP_129S1SvImJ_G0023242.1 mouse_genomes_project 17 20781265 20787151 + Zfp943 protein_coding processed_transcript MGP_129S1SvImJ_T0047728.1 MGP_129S1SvImJ_G0023740.1 mouse_genomes_project 17 38832677 38833617 - MGP_129S1SvImJ_P0047728 Olfr137 protein_coding protein_coding MGP_129S1SvImJ_T0045859.1 MGP_129S1SvImJ_G0023278.1 mouse_genomes_project 17 22815837 22817896 + MGP_129S1SvImJ_P0045859 protein_coding protein_coding MGP_129S1SvImJ_T0099550.1 MGP_129S1SvImJ_G0037617.1 mouse_genomes_project 17 24783288 24783395 - Gm22645 snRNA snRNA MGP_129S1SvImJ_T0048026.1 MGP_129S1SvImJ_G0023845.1 mouse_genomes_project 17 48592877 48628546 + MGP_129S1SvImJ_P0048026 AI661453 protein_coding protein_coding MGP_129S1SvImJ_T0048027.1 MGP_129S1SvImJ_G0023845.1 mouse_genomes_project 17 48593067 48629040 + MGP_129S1SvImJ_P0048027 AI661453 protein_coding protein_coding MGP_129S1SvImJ_T0048545.1 MGP_129S1SvImJ_G0024014.1 mouse_genomes_project 17 74261831 74337513 + MGP_129S1SvImJ_P0048545 Clip4 protein_coding protein_coding MGP_129S1SvImJ_T0048546.1 MGP_129S1SvImJ_G0024014.1 mouse_genomes_project 17 74262582 74337519 + MGP_129S1SvImJ_P0048546 Clip4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0046484.1 MGP_129S1SvImJ_G0023431.1 mouse_genomes_project 17 27251295 27409778 + MGP_129S1SvImJ_P0046484 Anks1 protein_coding protein_coding MGP_129S1SvImJ_T0046485.1 MGP_129S1SvImJ_G0023431.1 mouse_genomes_project 17 27251327 27409775 + MGP_129S1SvImJ_P0046485 Anks1 protein_coding protein_coding MGP_129S1SvImJ_T0046486.1 MGP_129S1SvImJ_G0023431.1 mouse_genomes_project 17 27251327 27409775 + MGP_129S1SvImJ_P0046486 Anks1 protein_coding protein_coding MGP_129S1SvImJ_T0046487.1 MGP_129S1SvImJ_G0023431.1 mouse_genomes_project 17 27354766 27409777 + Anks1 protein_coding processed_transcript MGP_129S1SvImJ_T0006981.1 MGP_129S1SvImJ_G0005747.1 mouse_genomes_project 17 66601094 66642439 - AU016765 lincRNA lincRNA MGP_129S1SvImJ_T0006982.1 MGP_129S1SvImJ_G0005747.1 mouse_genomes_project 17 66601147 66642397 - AU016765 lincRNA lincRNA MGP_129S1SvImJ_T0006983.1 MGP_129S1SvImJ_G0005747.1 mouse_genomes_project 17 66601150 66642477 - AU016765 lincRNA lincRNA MGP_129S1SvImJ_T0006984.1 MGP_129S1SvImJ_G0005747.1 mouse_genomes_project 17 66601152 66642320 - AU016765 lincRNA lincRNA MGP_129S1SvImJ_T0048266.1 MGP_129S1SvImJ_G0023925.1 mouse_genomes_project 17 58009973 58041575 + MGP_129S1SvImJ_P0048266 Kdm4b protein_coding protein_coding MGP_129S1SvImJ_T0048267.1 MGP_129S1SvImJ_G0023925.1 mouse_genomes_project 17 58009985 58091409 + MGP_129S1SvImJ_P0048267 Kdm4b protein_coding protein_coding MGP_129S1SvImJ_T0048268.1 MGP_129S1SvImJ_G0023925.1 mouse_genomes_project 17 58010002 58091404 + MGP_129S1SvImJ_P0048268 Kdm4b protein_coding protein_coding MGP_129S1SvImJ_T0048269.1 MGP_129S1SvImJ_G0023925.1 mouse_genomes_project 17 58058993 58074694 + Kdm4b protein_coding processed_transcript MGP_129S1SvImJ_T0048270.1 MGP_129S1SvImJ_G0023925.1 mouse_genomes_project 17 58082059 58082328 + Kdm4b protein_coding processed_transcript MGP_129S1SvImJ_T0048271.1 MGP_129S1SvImJ_G0023925.1 mouse_genomes_project 17 58082462 58091415 + MGP_129S1SvImJ_P0048271 Kdm4b protein_coding protein_coding MGP_129S1SvImJ_T0099583.1 MGP_129S1SvImJ_G0037650.1 mouse_genomes_project 17 91881720 91881824 - Gm23947 snRNA snRNA MGP_129S1SvImJ_T0045709.1 MGP_129S1SvImJ_G0023208.1 mouse_genomes_project 17 19201943 19202840 + MGP_129S1SvImJ_P0045709 Vmn1r225 protein_coding protein_coding MGP_129S1SvImJ_T0048572.1 MGP_129S1SvImJ_G0024030.1 mouse_genomes_project 17 77138809 77151180 + MGP_129S1SvImJ_P0048572 Yipf4 protein_coding protein_coding MGP_129S1SvImJ_T0048307.1 MGP_129S1SvImJ_G0023931.1 mouse_genomes_project 17 58316530 58317297 + MGP_129S1SvImJ_P0048307 Rpl36 protein_coding protein_coding MGP_129S1SvImJ_T0047954.1 MGP_129S1SvImJ_G0023817.1 mouse_genomes_project 17 47493574 47540618 - MGP_129S1SvImJ_P0047954 Ttbk1 protein_coding protein_coding MGP_129S1SvImJ_T0047955.1 MGP_129S1SvImJ_G0023817.1 mouse_genomes_project 17 47512579 47540371 - MGP_129S1SvImJ_P0047955 Ttbk1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0099572.1 MGP_129S1SvImJ_G0037639.1 mouse_genomes_project 17 68265901 68266008 + Gm23264 snRNA snRNA MGP_129S1SvImJ_T0100822.1 MGP_129S1SvImJ_G0038889.1 mouse_genomes_project 17 24362629 24362766 + Gm25921 snoRNA snoRNA MGP_129S1SvImJ_T0007004.1 MGP_129S1SvImJ_G0005762.1 mouse_genomes_project 17 90890508 90902090 + Gm28676 lincRNA lincRNA MGP_129S1SvImJ_T0047981.1 MGP_129S1SvImJ_G0023825.1 mouse_genomes_project 17 47746353 47754496 - MGP_129S1SvImJ_P0047981 Rrp36 protein_coding protein_coding MGP_129S1SvImJ_T0048739.1 MGP_129S1SvImJ_G0024095.1 mouse_genomes_project 17 90296276 90300037 - MGP_129S1SvImJ_P0048739 Atp6v1e2 protein_coding protein_coding MGP_129S1SvImJ_T0048458.1 MGP_129S1SvImJ_G0023995.1 mouse_genomes_project 17 71146326 71152343 + MGP_129S1SvImJ_P0048458 Tmem200c protein_coding protein_coding MGP_129S1SvImJ_T0047290.1 MGP_129S1SvImJ_G0023606.1 mouse_genomes_project 17 35149059 35159475 + MGP_129S1SvImJ_P0047290 Vwa7 protein_coding protein_coding MGP_129S1SvImJ_T0047291.1 MGP_129S1SvImJ_G0023606.1 mouse_genomes_project 17 35149118 35159254 + MGP_129S1SvImJ_P0047291 Vwa7 protein_coding protein_coding MGP_129S1SvImJ_T0013255.1 MGP_129S1SvImJ_G0011344.1 mouse_genomes_project 17 35736135 35736330 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0047819.1 MGP_129S1SvImJ_G0023792.1 mouse_genomes_project 17 46583143 46586760 + MGP_129S1SvImJ_P0047819 Slc35b2 protein_coding protein_coding MGP_129S1SvImJ_T0045950.1 MGP_129S1SvImJ_G0023303.1 mouse_genomes_project 17 23459364 23460950 + MGP_129S1SvImJ_P0045950 Bricd5 protein_coding protein_coding MGP_129S1SvImJ_T0045951.1 MGP_129S1SvImJ_G0023303.1 mouse_genomes_project 17 23459447 23460868 + MGP_129S1SvImJ_P0045951 Bricd5 protein_coding protein_coding MGP_129S1SvImJ_T0048464.1 MGP_129S1SvImJ_G0023999.1 mouse_genomes_project 17 72326665 73229732 + MGP_129S1SvImJ_P0048464 Dlgap1 protein_coding protein_coding MGP_129S1SvImJ_T0048465.1 MGP_129S1SvImJ_G0023999.1 mouse_genomes_project 17 72326838 73228043 + MGP_129S1SvImJ_P0048465 Dlgap1 protein_coding protein_coding MGP_129S1SvImJ_T0048466.1 MGP_129S1SvImJ_G0023999.1 mouse_genomes_project 17 72326960 72877830 + Dlgap1 protein_coding retained_intron MGP_129S1SvImJ_T0048467.1 MGP_129S1SvImJ_G0023999.1 mouse_genomes_project 17 72326960 72442557 + Dlgap1 protein_coding retained_intron MGP_129S1SvImJ_T0048468.1 MGP_129S1SvImJ_G0023999.1 mouse_genomes_project 17 72326965 73037730 + Dlgap1 protein_coding retained_intron MGP_129S1SvImJ_T0048469.1 MGP_129S1SvImJ_G0023999.1 mouse_genomes_project 17 72326994 73224115 + MGP_129S1SvImJ_P0048469 Dlgap1 protein_coding protein_coding MGP_129S1SvImJ_T0048470.1 MGP_129S1SvImJ_G0023999.1 mouse_genomes_project 17 72327013 72962475 + Dlgap1 protein_coding retained_intron MGP_129S1SvImJ_T0048471.1 MGP_129S1SvImJ_G0023999.1 mouse_genomes_project 17 72777359 73228121 + MGP_129S1SvImJ_P0048471 Dlgap1 protein_coding protein_coding MGP_129S1SvImJ_T0048472.1 MGP_129S1SvImJ_G0023999.1 mouse_genomes_project 17 72875054 73226553 + MGP_129S1SvImJ_P0048472 Dlgap1 protein_coding protein_coding MGP_129S1SvImJ_T0048473.1 MGP_129S1SvImJ_G0023999.1 mouse_genomes_project 17 72880881 72963830 + Dlgap1 protein_coding retained_intron MGP_129S1SvImJ_T0048474.1 MGP_129S1SvImJ_G0023999.1 mouse_genomes_project 17 72880940 73192044 + Dlgap1 protein_coding retained_intron MGP_129S1SvImJ_T0048475.1 MGP_129S1SvImJ_G0023999.1 mouse_genomes_project 17 72880940 73229728 + MGP_129S1SvImJ_P0048475 Dlgap1 protein_coding protein_coding MGP_129S1SvImJ_T0048476.1 MGP_129S1SvImJ_G0023999.1 mouse_genomes_project 17 72880949 73226864 + MGP_129S1SvImJ_P0048476 Dlgap1 protein_coding protein_coding MGP_129S1SvImJ_T0048477.1 MGP_129S1SvImJ_G0023999.1 mouse_genomes_project 17 72880966 73226621 + MGP_129S1SvImJ_P0048477 Dlgap1 protein_coding protein_coding MGP_129S1SvImJ_T0048478.1 MGP_129S1SvImJ_G0023999.1 mouse_genomes_project 17 72925431 73111617 + Dlgap1 protein_coding retained_intron MGP_129S1SvImJ_T0048479.1 MGP_129S1SvImJ_G0023999.1 mouse_genomes_project 17 72925666 73224412 + MGP_129S1SvImJ_P0048479 Dlgap1 protein_coding protein_coding MGP_129S1SvImJ_T0006986.1 MGP_129S1SvImJ_G0005749.1 mouse_genomes_project 17 71749716 71753939 + C030034I22Rik lincRNA lincRNA MGP_129S1SvImJ_T0006987.1 MGP_129S1SvImJ_G0005749.1 mouse_genomes_project 17 71749775 71751257 + C030034I22Rik lincRNA lincRNA MGP_129S1SvImJ_T0047706.1 MGP_129S1SvImJ_G0023724.1 mouse_genomes_project 17 38124634 38160102 + MGP_129S1SvImJ_P0047706 Olfr119 protein_coding protein_coding MGP_129S1SvImJ_T0006998.1 MGP_129S1SvImJ_G0005759.1 mouse_genomes_project 17 89080439 89112740 - Gm29418 lincRNA lincRNA MGP_129S1SvImJ_T0046157.1 MGP_129S1SvImJ_G0023351.1 mouse_genomes_project 17 24374133 24380584 + MGP_129S1SvImJ_P0046157 Prss29 protein_coding protein_coding MGP_129S1SvImJ_T0045881.1 MGP_129S1SvImJ_G0023288.1 mouse_genomes_project 17 23024039 23093108 - MGP_129S1SvImJ_P0045881 Pdpk1 protein_coding protein_coding MGP_129S1SvImJ_T0045882.1 MGP_129S1SvImJ_G0023288.1 mouse_genomes_project 17 23024047 23093201 - MGP_129S1SvImJ_P0045882 Pdpk1 protein_coding protein_coding MGP_129S1SvImJ_T0045883.1 MGP_129S1SvImJ_G0023288.1 mouse_genomes_project 17 23026176 23093218 - MGP_129S1SvImJ_P0045883 Pdpk1 protein_coding protein_coding MGP_129S1SvImJ_T0045884.1 MGP_129S1SvImJ_G0023288.1 mouse_genomes_project 17 23038485 23044075 - Pdpk1 protein_coding processed_transcript MGP_129S1SvImJ_T0045885.1 MGP_129S1SvImJ_G0023288.1 mouse_genomes_project 17 23041880 23103695 - Pdpk1 protein_coding processed_transcript MGP_129S1SvImJ_T0045886.1 MGP_129S1SvImJ_G0023288.1 mouse_genomes_project 17 23053734 23093204 - Pdpk1 protein_coding retained_intron MGP_129S1SvImJ_T0045887.1 MGP_129S1SvImJ_G0023288.1 mouse_genomes_project 17 23056583 23092418 - MGP_129S1SvImJ_P0045887 Pdpk1 protein_coding protein_coding MGP_129S1SvImJ_T0045888.1 MGP_129S1SvImJ_G0023288.1 mouse_genomes_project 17 23056635 23070529 - MGP_129S1SvImJ_P0045888 Pdpk1 protein_coding protein_coding MGP_129S1SvImJ_T0045889.1 MGP_129S1SvImJ_G0023288.1 mouse_genomes_project 17 23060648 23092776 - MGP_129S1SvImJ_P0045889 Pdpk1 protein_coding protein_coding MGP_129S1SvImJ_T0001016.1 MGP_129S1SvImJ_G0000945.1 mouse_genomes_project 17 53324392 53327646 + TEC TEC MGP_129S1SvImJ_T0046864.1 MGP_129S1SvImJ_G0023520.1 mouse_genomes_project 17 32951395 32955311 - MGP_129S1SvImJ_P0046864 4921501E09Rik protein_coding protein_coding MGP_129S1SvImJ_T0046583.1 MGP_129S1SvImJ_G0023450.1 mouse_genomes_project 17 28257544 28297936 + MGP_129S1SvImJ_P0046583 Brpf3 protein_coding protein_coding MGP_129S1SvImJ_T0046584.1 MGP_129S1SvImJ_G0023450.1 mouse_genomes_project 17 28258239 28262764 + Brpf3 protein_coding processed_transcript MGP_129S1SvImJ_T0046585.1 MGP_129S1SvImJ_G0023450.1 mouse_genomes_project 17 28266101 28276567 + Brpf3 protein_coding processed_transcript MGP_129S1SvImJ_T0046586.1 MGP_129S1SvImJ_G0023450.1 mouse_genomes_project 17 28266993 28297883 + Brpf3 protein_coding retained_intron MGP_129S1SvImJ_T0046587.1 MGP_129S1SvImJ_G0023450.1 mouse_genomes_project 17 28272512 28276953 + Brpf3 protein_coding retained_intron MGP_129S1SvImJ_T0046588.1 MGP_129S1SvImJ_G0023450.1 mouse_genomes_project 17 28272665 28277191 + Brpf3 protein_coding processed_transcript MGP_129S1SvImJ_T0046589.1 MGP_129S1SvImJ_G0023450.1 mouse_genomes_project 17 28282028 28296088 + Brpf3 protein_coding processed_transcript MGP_129S1SvImJ_T0046590.1 MGP_129S1SvImJ_G0023450.1 mouse_genomes_project 17 28282983 28296126 + Brpf3 protein_coding processed_transcript MGP_129S1SvImJ_T0046591.1 MGP_129S1SvImJ_G0023450.1 mouse_genomes_project 17 28283063 28297931 + Brpf3 protein_coding processed_transcript MGP_129S1SvImJ_T0046592.1 MGP_129S1SvImJ_G0023450.1 mouse_genomes_project 17 28287471 28296181 + Brpf3 protein_coding processed_transcript MGP_129S1SvImJ_T0047315.1 MGP_129S1SvImJ_G0023612.1 mouse_genomes_project 17 35205198 35210951 + MGP_129S1SvImJ_P0047315 Ly6g6c protein_coding protein_coding MGP_129S1SvImJ_T0047316.1 MGP_129S1SvImJ_G0023612.1 mouse_genomes_project 17 35208651 35211376 + MGP_129S1SvImJ_P0047316 Ly6g6c protein_coding protein_coding MGP_129S1SvImJ_T0047317.1 MGP_129S1SvImJ_G0023612.1 mouse_genomes_project 17 35208716 35210860 + MGP_129S1SvImJ_P0047317 Ly6g6c protein_coding protein_coding MGP_129S1SvImJ_T0048022.1 MGP_129S1SvImJ_G0023844.1 mouse_genomes_project 17 48557571 48593644 - MGP_129S1SvImJ_P0048022 1700001C19Rik protein_coding protein_coding MGP_129S1SvImJ_T0048023.1 MGP_129S1SvImJ_G0023844.1 mouse_genomes_project 17 48558212 48568203 - MGP_129S1SvImJ_P0048023 1700001C19Rik protein_coding protein_coding MGP_129S1SvImJ_T0048024.1 MGP_129S1SvImJ_G0023844.1 mouse_genomes_project 17 48558220 48559549 - 1700001C19Rik protein_coding processed_transcript MGP_129S1SvImJ_T0048025.1 MGP_129S1SvImJ_G0023844.1 mouse_genomes_project 17 48558465 48593645 - 1700001C19Rik protein_coding processed_transcript MGP_129S1SvImJ_T0102355.1 MGP_129S1SvImJ_G0040189.1 mouse_genomes_project 17 37654577 37656035 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0047723.1 MGP_129S1SvImJ_G0023738.1 mouse_genomes_project 17 38753619 38754698 + MGP_129S1SvImJ_P0047723 Olfr135 protein_coding protein_coding MGP_129S1SvImJ_T0045575.1 MGP_129S1SvImJ_G0023155.1 mouse_genomes_project 17 10594848 10615497 - MGP_129S1SvImJ_P0045575 Acat3 protein_coding protein_coding MGP_129S1SvImJ_T0045576.1 MGP_129S1SvImJ_G0023155.1 mouse_genomes_project 17 10597145 10615395 - MGP_129S1SvImJ_P0045576 Acat3 protein_coding protein_coding MGP_129S1SvImJ_T0045577.1 MGP_129S1SvImJ_G0023155.1 mouse_genomes_project 17 10597232 10600630 - Acat3 protein_coding retained_intron MGP_129S1SvImJ_T0013306.1 MGP_129S1SvImJ_G0011395.1 mouse_genomes_project 17 79004614 79005061 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001010.1 MGP_129S1SvImJ_G0000939.1 mouse_genomes_project 17 53226314 53229466 - TEC TEC MGP_129S1SvImJ_T0011455.1 MGP_129S1SvImJ_G0009571.1 mouse_genomes_project 17 78829532 78829640 - Gm26124 misc_RNA misc_RNA MGP_129S1SvImJ_T0047310.1 MGP_129S1SvImJ_G0023610.1 mouse_genomes_project 17 35198935 35201899 + MGP_129S1SvImJ_P0047310 Ddah2 protein_coding protein_coding MGP_129S1SvImJ_T0047311.1 MGP_129S1SvImJ_G0023610.1 mouse_genomes_project 17 35199619 35200710 + MGP_129S1SvImJ_P0047311 Ddah2 protein_coding protein_coding MGP_129S1SvImJ_T0047312.1 MGP_129S1SvImJ_G0023610.1 mouse_genomes_project 17 35200696 35201429 + Ddah2 protein_coding retained_intron MGP_129S1SvImJ_T0102345.1 MGP_129S1SvImJ_G0040179.1 mouse_genomes_project 17 36913020 36915557 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0047696.1 MGP_129S1SvImJ_G0023716.1 mouse_genomes_project 17 37906634 37908967 + MGP_129S1SvImJ_P0047696 protein_coding protein_coding MGP_129S1SvImJ_T0046431.1 MGP_129S1SvImJ_G0023416.1 mouse_genomes_project 17 26305424 26372717 + MGP_129S1SvImJ_P0046431 Itpr3 protein_coding protein_coding MGP_129S1SvImJ_T0045743.1 MGP_129S1SvImJ_G0023233.1 mouse_genomes_project 17 20388413 20393370 + MGP_129S1SvImJ_P0045743 Zfp983 protein_coding protein_coding MGP_129S1SvImJ_T0047692.1 MGP_129S1SvImJ_G0023713.1 mouse_genomes_project 17 37875507 37876452 + MGP_129S1SvImJ_P0047692 Olfr109 protein_coding protein_coding MGP_129S1SvImJ_T0100831.1 MGP_129S1SvImJ_G0038898.1 mouse_genomes_project 17 56273259 56273396 + Gm26291 snoRNA snoRNA MGP_129S1SvImJ_T0048690.1 MGP_129S1SvImJ_G0024075.1 mouse_genomes_project 17 86807213 86913280 + MGP_129S1SvImJ_P0048690 Mta3 protein_coding protein_coding MGP_129S1SvImJ_T0048691.1 MGP_129S1SvImJ_G0024075.1 mouse_genomes_project 17 86807213 86900735 + MGP_129S1SvImJ_P0048691 Mta3 protein_coding protein_coding MGP_129S1SvImJ_T0048692.1 MGP_129S1SvImJ_G0024075.1 mouse_genomes_project 17 86807213 86900733 + MGP_129S1SvImJ_P0048692 Mta3 protein_coding protein_coding MGP_129S1SvImJ_T0048693.1 MGP_129S1SvImJ_G0024075.1 mouse_genomes_project 17 86807234 86929401 + MGP_129S1SvImJ_P0048693 Mta3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048694.1 MGP_129S1SvImJ_G0024075.1 mouse_genomes_project 17 86807241 86922792 + MGP_129S1SvImJ_P0048694 Mta3 protein_coding protein_coding MGP_129S1SvImJ_T0048695.1 MGP_129S1SvImJ_G0024075.1 mouse_genomes_project 17 86807308 86931418 + MGP_129S1SvImJ_P0048695 Mta3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048696.1 MGP_129S1SvImJ_G0024075.1 mouse_genomes_project 17 86833947 86858488 + Mta3 protein_coding processed_transcript MGP_129S1SvImJ_T0048697.1 MGP_129S1SvImJ_G0024075.1 mouse_genomes_project 17 86860253 86908101 + MGP_129S1SvImJ_P0048697 Mta3 protein_coding protein_coding MGP_129S1SvImJ_T0048698.1 MGP_129S1SvImJ_G0024075.1 mouse_genomes_project 17 86892200 86928101 + MGP_129S1SvImJ_P0048698 Mta3 protein_coding protein_coding MGP_129S1SvImJ_T0048699.1 MGP_129S1SvImJ_G0024075.1 mouse_genomes_project 17 86903282 86912454 + Mta3 protein_coding processed_transcript MGP_129S1SvImJ_T0010196.1 MGP_129S1SvImJ_G0008312.1 mouse_genomes_project 17 23204033 23204096 - Mir6965 miRNA miRNA MGP_129S1SvImJ_T0045784.1 MGP_129S1SvImJ_G0023252.1 mouse_genomes_project 17 21964222 22311525 + MGP_129S1SvImJ_P0045784 protein_coding protein_coding MGP_129S1SvImJ_T0046662.1 MGP_129S1SvImJ_G0023467.1 mouse_genomes_project 17 29071707 29095007 - MGP_129S1SvImJ_P0046662 Tmem217 protein_coding protein_coding MGP_129S1SvImJ_T0046663.1 MGP_129S1SvImJ_G0023467.1 mouse_genomes_project 17 29071707 29095007 - MGP_129S1SvImJ_P0046663 Tmem217 protein_coding protein_coding MGP_129S1SvImJ_T0100821.1 MGP_129S1SvImJ_G0038888.1 mouse_genomes_project 17 23735599 23735733 + Snora64 snoRNA snoRNA MGP_129S1SvImJ_T0047621.1 MGP_129S1SvImJ_G0023685.1 mouse_genomes_project 17 37232477 37240951 - MGP_129S1SvImJ_P0047621 Trim40 protein_coding protein_coding MGP_129S1SvImJ_T0047622.1 MGP_129S1SvImJ_G0023685.1 mouse_genomes_project 17 37232724 37240394 - MGP_129S1SvImJ_P0047622 Trim40 protein_coding protein_coding MGP_129S1SvImJ_T0047623.1 MGP_129S1SvImJ_G0023685.1 mouse_genomes_project 17 37233817 37241029 - Trim40 protein_coding retained_intron MGP_129S1SvImJ_T0047624.1 MGP_129S1SvImJ_G0023685.1 mouse_genomes_project 17 37240125 37241018 - Trim40 protein_coding processed_transcript MGP_129S1SvImJ_T0045578.1 MGP_129S1SvImJ_G0023156.1 mouse_genomes_project 17 10618103 10646367 - MGP_129S1SvImJ_P0045578 Acat2 protein_coding protein_coding MGP_129S1SvImJ_T0013240.1 MGP_129S1SvImJ_G0011329.1 mouse_genomes_project 17 13413598 13413856 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0046660.1 MGP_129S1SvImJ_G0023465.1 mouse_genomes_project 17 29030619 29036855 + MGP_129S1SvImJ_P0046660 Pim1 protein_coding protein_coding MGP_129S1SvImJ_T0003805.1 MGP_129S1SvImJ_G0003421.1 mouse_genomes_project 17 73244361 73245742 + Gm20703 antisense antisense MGP_129S1SvImJ_T0047909.1 MGP_129S1SvImJ_G0023805.1 mouse_genomes_project 17 47218080 47250033 - MGP_129S1SvImJ_P0047909 Polh protein_coding protein_coding MGP_129S1SvImJ_T0048194.1 MGP_129S1SvImJ_G0023887.1 mouse_genomes_project 17 55033177 55061353 + MGP_129S1SvImJ_P0048194 Rab5a protein_coding protein_coding MGP_129S1SvImJ_T0102354.1 MGP_129S1SvImJ_G0040188.1 mouse_genomes_project 17 37626157 37627549 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102341.1 MGP_129S1SvImJ_G0040175.1 mouse_genomes_project 17 36852771 36853999 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0047885.1 MGP_129S1SvImJ_G0023802.1 mouse_genomes_project 17 47164544 47181657 - MGP_129S1SvImJ_P0047885 Rsph9 protein_coding protein_coding MGP_129S1SvImJ_T0047889.1 MGP_129S1SvImJ_G0023802.1 mouse_genomes_project 17 47171780 47189145 - MGP_129S1SvImJ_P0047889 Rsph9 protein_coding protein_coding MGP_129S1SvImJ_T0047890.1 MGP_129S1SvImJ_G0023802.1 mouse_genomes_project 17 47179317 47181622 - Rsph9 protein_coding retained_intron MGP_129S1SvImJ_T0010232.1 MGP_129S1SvImJ_G0008348.1 mouse_genomes_project 17 47618383 47618446 - Mir6976 miRNA miRNA MGP_129S1SvImJ_T0046177.1 MGP_129S1SvImJ_G0023356.1 mouse_genomes_project 17 24545395 24550398 + MGP_129S1SvImJ_P0046177 Tekt4 protein_coding protein_coding MGP_129S1SvImJ_T0047601.1 MGP_129S1SvImJ_G0023678.1 mouse_genomes_project 17 37004320 37007702 - MGP_129S1SvImJ_P0047601 H2-M9 protein_coding protein_coding MGP_129S1SvImJ_T0047602.1 MGP_129S1SvImJ_G0023678.1 mouse_genomes_project 17 37005441 37007702 - MGP_129S1SvImJ_P0047602 H2-M9 protein_coding protein_coding MGP_129S1SvImJ_T0102337.1 MGP_129S1SvImJ_G0040171.1 mouse_genomes_project 17 36489761 36501934 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0003755.1 MGP_129S1SvImJ_G0003385.1 mouse_genomes_project 17 28378036 28379543 + 1700030A11Rik antisense antisense MGP_129S1SvImJ_T0047870.1 MGP_129S1SvImJ_G0023799.1 mouse_genomes_project 17 46767359 46768340 - MGP_129S1SvImJ_P0047870 1600014C23Rik protein_coding protein_coding MGP_129S1SvImJ_T0047892.1 MGP_129S1SvImJ_G0023804.1 mouse_genomes_project 17 47207080 47215414 + MGP_129S1SvImJ_P0047892 Gtpbp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047893.1 MGP_129S1SvImJ_G0023804.1 mouse_genomes_project 17 47207080 47215416 + MGP_129S1SvImJ_P0047893 Gtpbp2 protein_coding protein_coding MGP_129S1SvImJ_T0047894.1 MGP_129S1SvImJ_G0023804.1 mouse_genomes_project 17 47207097 47209551 + Gtpbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0047895.1 MGP_129S1SvImJ_G0023804.1 mouse_genomes_project 17 47207114 47215382 + MGP_129S1SvImJ_P0047895 Gtpbp2 protein_coding protein_coding MGP_129S1SvImJ_T0047896.1 MGP_129S1SvImJ_G0023804.1 mouse_genomes_project 17 47207159 47210353 + MGP_129S1SvImJ_P0047896 Gtpbp2 protein_coding protein_coding MGP_129S1SvImJ_T0047897.1 MGP_129S1SvImJ_G0023804.1 mouse_genomes_project 17 47207209 47208204 + Gtpbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0047898.1 MGP_129S1SvImJ_G0023804.1 mouse_genomes_project 17 47207343 47210796 + Gtpbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0047899.1 MGP_129S1SvImJ_G0023804.1 mouse_genomes_project 17 47209078 47210867 + Gtpbp2 protein_coding retained_intron MGP_129S1SvImJ_T0047900.1 MGP_129S1SvImJ_G0023804.1 mouse_genomes_project 17 47209271 47211839 + Gtpbp2 protein_coding processed_transcript MGP_129S1SvImJ_T0047901.1 MGP_129S1SvImJ_G0023804.1 mouse_genomes_project 17 47209363 47211234 + Gtpbp2 protein_coding retained_intron MGP_129S1SvImJ_T0047902.1 MGP_129S1SvImJ_G0023804.1 mouse_genomes_project 17 47211739 47213926 + Gtpbp2 protein_coding retained_intron MGP_129S1SvImJ_T0047903.1 MGP_129S1SvImJ_G0023804.1 mouse_genomes_project 17 47211821 47213376 + Gtpbp2 protein_coding retained_intron MGP_129S1SvImJ_T0047904.1 MGP_129S1SvImJ_G0023804.1 mouse_genomes_project 17 47212474 47214278 + MGP_129S1SvImJ_P0047904 Gtpbp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047905.1 MGP_129S1SvImJ_G0023804.1 mouse_genomes_project 17 47212910 47214065 + Gtpbp2 protein_coding retained_intron MGP_129S1SvImJ_T0047906.1 MGP_129S1SvImJ_G0023804.1 mouse_genomes_project 17 47213031 47214255 + Gtpbp2 protein_coding retained_intron MGP_129S1SvImJ_T0047907.1 MGP_129S1SvImJ_G0023804.1 mouse_genomes_project 17 47213274 47214438 + MGP_129S1SvImJ_P0047907 Gtpbp2 protein_coding protein_coding MGP_129S1SvImJ_T0047908.1 MGP_129S1SvImJ_G0023804.1 mouse_genomes_project 17 47213679 47214454 + Gtpbp2 protein_coding retained_intron MGP_129S1SvImJ_T0102347.1 MGP_129S1SvImJ_G0040181.1 mouse_genomes_project 17 37059881 37061462 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0046703.1 MGP_129S1SvImJ_G0023477.1 mouse_genomes_project 17 30265411 30574924 + MGP_129S1SvImJ_P0046703 Dnah8 protein_coding protein_coding MGP_129S1SvImJ_T0046704.1 MGP_129S1SvImJ_G0023477.1 mouse_genomes_project 17 30284025 30574786 + MGP_129S1SvImJ_P0046704 Dnah8 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0046705.1 MGP_129S1SvImJ_G0023477.1 mouse_genomes_project 17 30284025 30574786 + MGP_129S1SvImJ_P0046705 Dnah8 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0046594.1 MGP_129S1SvImJ_G0023452.1 mouse_genomes_project 17 28368161 28388083 - MGP_129S1SvImJ_P0046594 4930539E08Rik protein_coding unknown_likely_coding MGP_129S1SvImJ_T0046595.1 MGP_129S1SvImJ_G0023452.1 mouse_genomes_project 17 28368174 28388174 - MGP_129S1SvImJ_P0046595 4930539E08Rik protein_coding protein_coding MGP_129S1SvImJ_T0045618.1 MGP_129S1SvImJ_G0023168.1 mouse_genomes_project 17 12774605 12790858 - MGP_129S1SvImJ_P0045618 Phf10 protein_coding protein_coding MGP_129S1SvImJ_T0045619.1 MGP_129S1SvImJ_G0023168.1 mouse_genomes_project 17 12774610 12776425 - Phf10 protein_coding retained_intron MGP_129S1SvImJ_T0045620.1 MGP_129S1SvImJ_G0023168.1 mouse_genomes_project 17 12776162 12782303 - Phf10 protein_coding retained_intron MGP_129S1SvImJ_T0045621.1 MGP_129S1SvImJ_G0023168.1 mouse_genomes_project 17 12777334 12790858 - MGP_129S1SvImJ_P0045621 Phf10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045622.1 MGP_129S1SvImJ_G0023168.1 mouse_genomes_project 17 12785295 12789112 - Phf10 protein_coding retained_intron MGP_129S1SvImJ_T0098529.1 MGP_129S1SvImJ_G0036614.1 mouse_genomes_project 17 45607220 45607339 - n-R5s27 rRNA rRNA MGP_129S1SvImJ_T0046561.1 MGP_129S1SvImJ_G0023444.1 mouse_genomes_project 17 27983078 27988571 - MGP_129S1SvImJ_P0046561 Clps protein_coding protein_coding MGP_129S1SvImJ_T0046562.1 MGP_129S1SvImJ_G0023444.1 mouse_genomes_project 17 27983081 27988516 - MGP_129S1SvImJ_P0046562 Clps protein_coding protein_coding MGP_129S1SvImJ_T0045523.1 MGP_129S1SvImJ_G0023140.1 mouse_genomes_project 17 7779517 7907397 - MGP_129S1SvImJ_P0045523 Qk protein_coding protein_coding MGP_129S1SvImJ_T0045524.1 MGP_129S1SvImJ_G0023140.1 mouse_genomes_project 17 7783225 7907397 - MGP_129S1SvImJ_P0045524 Qk protein_coding protein_coding MGP_129S1SvImJ_T0047704.1 MGP_129S1SvImJ_G0023722.1 mouse_genomes_project 17 38090192 38090919 - MGP_129S1SvImJ_P0047704 Olfr117 protein_coding protein_coding MGP_129S1SvImJ_T0006973.1 MGP_129S1SvImJ_G0005742.1 mouse_genomes_project 17 53650162 53667467 + Gm19585 lincRNA lincRNA MGP_129S1SvImJ_T0006974.1 MGP_129S1SvImJ_G0005742.1 mouse_genomes_project 17 53662281 53667263 + Gm19585 lincRNA lincRNA MGP_129S1SvImJ_T0099557.1 MGP_129S1SvImJ_G0037624.1 mouse_genomes_project 17 34772797 34772904 - Gm24389 snRNA snRNA MGP_129S1SvImJ_T0045979.1 MGP_129S1SvImJ_G0023306.1 mouse_genomes_project 17 23518711 23525230 - MGP_129S1SvImJ_P0045979 Rab26 protein_coding protein_coding MGP_129S1SvImJ_T0045980.1 MGP_129S1SvImJ_G0023306.1 mouse_genomes_project 17 23520564 23525392 - MGP_129S1SvImJ_P0045980 Rab26 protein_coding protein_coding MGP_129S1SvImJ_T0045981.1 MGP_129S1SvImJ_G0023306.1 mouse_genomes_project 17 23520575 23525216 - Rab26 protein_coding retained_intron MGP_129S1SvImJ_T0045982.1 MGP_129S1SvImJ_G0023306.1 mouse_genomes_project 17 23520831 23521459 - Rab26 protein_coding retained_intron MGP_129S1SvImJ_T0045983.1 MGP_129S1SvImJ_G0023306.1 mouse_genomes_project 17 23521053 23525714 - MGP_129S1SvImJ_P0045983 Rab26 protein_coding protein_coding MGP_129S1SvImJ_T0011453.1 MGP_129S1SvImJ_G0009569.1 mouse_genomes_project 17 69834277 69834554 + Gm22277 misc_RNA misc_RNA MGP_129S1SvImJ_T0102294.1 MGP_129S1SvImJ_G0040128.1 mouse_genomes_project 17 19115663 19116515 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0046166.1 MGP_129S1SvImJ_G0023355.1 mouse_genomes_project 17 24437730 24500782 - MGP_129S1SvImJ_P0046166 Cacna1h protein_coding protein_coding MGP_129S1SvImJ_T0046167.1 MGP_129S1SvImJ_G0023355.1 mouse_genomes_project 17 24437731 24500649 - MGP_129S1SvImJ_P0046167 Cacna1h protein_coding unknown_likely_coding MGP_129S1SvImJ_T0046168.1 MGP_129S1SvImJ_G0023355.1 mouse_genomes_project 17 24437733 24500782 - MGP_129S1SvImJ_P0046168 Cacna1h protein_coding protein_coding MGP_129S1SvImJ_T0046169.1 MGP_129S1SvImJ_G0023355.1 mouse_genomes_project 17 24437740 24500782 - MGP_129S1SvImJ_P0046169 Cacna1h protein_coding protein_coding MGP_129S1SvImJ_T0046170.1 MGP_129S1SvImJ_G0023355.1 mouse_genomes_project 17 24440333 24445745 - MGP_129S1SvImJ_P0046170 Cacna1h protein_coding protein_coding MGP_129S1SvImJ_T0046171.1 MGP_129S1SvImJ_G0023355.1 mouse_genomes_project 17 24440645 24445373 - MGP_129S1SvImJ_P0046171 Cacna1h protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046172.1 MGP_129S1SvImJ_G0023355.1 mouse_genomes_project 17 24441000 24442379 - Cacna1h protein_coding retained_intron MGP_129S1SvImJ_T0046173.1 MGP_129S1SvImJ_G0023355.1 mouse_genomes_project 17 24453339 24454574 - Cacna1h protein_coding retained_intron MGP_129S1SvImJ_T0046174.1 MGP_129S1SvImJ_G0023355.1 mouse_genomes_project 17 24457360 24500767 - Cacna1h protein_coding retained_intron MGP_129S1SvImJ_T0046175.1 MGP_129S1SvImJ_G0023355.1 mouse_genomes_project 17 24462738 24500277 - MGP_129S1SvImJ_P0046175 Cacna1h protein_coding protein_coding MGP_129S1SvImJ_T0046176.1 MGP_129S1SvImJ_G0023355.1 mouse_genomes_project 17 24498832 24500782 - Cacna1h protein_coding retained_intron MGP_129S1SvImJ_T0011449.1 MGP_129S1SvImJ_G0009565.1 mouse_genomes_project 17 47455131 47455455 + Gm23037 misc_RNA misc_RNA MGP_129S1SvImJ_T0045778.1 MGP_129S1SvImJ_G0023250.1 mouse_genomes_project 17 21709083 21728809 - MGP_129S1SvImJ_P0045778 Zfp945 protein_coding protein_coding MGP_129S1SvImJ_T0045779.1 MGP_129S1SvImJ_G0023250.1 mouse_genomes_project 17 21711409 21723389 - Zfp945 protein_coding retained_intron MGP_129S1SvImJ_T0045780.1 MGP_129S1SvImJ_G0023250.1 mouse_genomes_project 17 21711409 21728809 - MGP_129S1SvImJ_P0045780 Zfp945 protein_coding protein_coding MGP_129S1SvImJ_T0045781.1 MGP_129S1SvImJ_G0023250.1 mouse_genomes_project 17 21714832 21728778 - MGP_129S1SvImJ_P0045781 Zfp945 protein_coding protein_coding MGP_129S1SvImJ_T0045782.1 MGP_129S1SvImJ_G0023250.1 mouse_genomes_project 17 21723396 21728809 - Zfp945 protein_coding retained_intron MGP_129S1SvImJ_T0102299.1 MGP_129S1SvImJ_G0040133.1 mouse_genomes_project 17 19962352 19962865 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0045808.1 MGP_129S1SvImJ_G0023261.1 mouse_genomes_project 17 22582518 22583549 - Thoc6 protein_coding retained_intron MGP_129S1SvImJ_T0045809.1 MGP_129S1SvImJ_G0023261.1 mouse_genomes_project 17 22582522 22589217 - Thoc6 protein_coding retained_intron MGP_129S1SvImJ_T0045810.1 MGP_129S1SvImJ_G0023261.1 mouse_genomes_project 17 22582522 22589257 - MGP_129S1SvImJ_P0045810 Thoc6 protein_coding protein_coding MGP_129S1SvImJ_T0045811.1 MGP_129S1SvImJ_G0023261.1 mouse_genomes_project 17 22582522 22589217 - MGP_129S1SvImJ_P0045811 Thoc6 protein_coding protein_coding MGP_129S1SvImJ_T0045812.1 MGP_129S1SvImJ_G0023261.1 mouse_genomes_project 17 22582701 22588980 - MGP_129S1SvImJ_P0045812 Thoc6 protein_coding protein_coding MGP_129S1SvImJ_T0045813.1 MGP_129S1SvImJ_G0023261.1 mouse_genomes_project 17 22582701 22589204 - MGP_129S1SvImJ_P0045813 Thoc6 protein_coding protein_coding MGP_129S1SvImJ_T0045814.1 MGP_129S1SvImJ_G0023261.1 mouse_genomes_project 17 22583105 22584414 - MGP_129S1SvImJ_P0045814 Thoc6 protein_coding protein_coding MGP_129S1SvImJ_T0045815.1 MGP_129S1SvImJ_G0023261.1 mouse_genomes_project 17 22584226 22589246 - MGP_129S1SvImJ_P0045815 Thoc6 protein_coding protein_coding MGP_129S1SvImJ_T0013258.1 MGP_129S1SvImJ_G0011347.1 mouse_genomes_project 17 36541592 36541632 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0045629.1 MGP_129S1SvImJ_G0023172.1 mouse_genomes_project 17 13201506 13210128 - MGP_129S1SvImJ_P0045629 Dll1 protein_coding protein_coding MGP_129S1SvImJ_T0045630.1 MGP_129S1SvImJ_G0023172.1 mouse_genomes_project 17 13201677 13202543 - Dll1 protein_coding retained_intron MGP_129S1SvImJ_T0045631.1 MGP_129S1SvImJ_G0023172.1 mouse_genomes_project 17 13204410 13205983 - Dll1 protein_coding processed_transcript MGP_129S1SvImJ_T0045632.1 MGP_129S1SvImJ_G0023172.1 mouse_genomes_project 17 13204763 13208224 - Dll1 protein_coding processed_transcript MGP_129S1SvImJ_T0045633.1 MGP_129S1SvImJ_G0023172.1 mouse_genomes_project 17 13205775 13209252 - Dll1 protein_coding retained_intron MGP_129S1SvImJ_T0045634.1 MGP_129S1SvImJ_G0023172.1 mouse_genomes_project 17 13208945 13212661 - Dll1 protein_coding processed_transcript MGP_129S1SvImJ_T0047737.1 MGP_129S1SvImJ_G0023749.1 mouse_genomes_project 17 39890190 39895637 + MGP_129S1SvImJ_P0047737 Esp38 protein_coding protein_coding MGP_129S1SvImJ_T0046932.1 MGP_129S1SvImJ_G0023537.1 mouse_genomes_project 17 33747439 33762531 + MGP_129S1SvImJ_P0046932 Kank3 protein_coding protein_coding MGP_129S1SvImJ_T0046933.1 MGP_129S1SvImJ_G0023537.1 mouse_genomes_project 17 33747442 33762530 + MGP_129S1SvImJ_P0046933 Kank3 protein_coding protein_coding MGP_129S1SvImJ_T0046934.1 MGP_129S1SvImJ_G0023537.1 mouse_genomes_project 17 33747442 33762527 + MGP_129S1SvImJ_P0046934 Kank3 protein_coding protein_coding MGP_129S1SvImJ_T0046935.1 MGP_129S1SvImJ_G0023537.1 mouse_genomes_project 17 33747448 33761771 + Kank3 protein_coding retained_intron MGP_129S1SvImJ_T0046937.1 MGP_129S1SvImJ_G0023537.1 mouse_genomes_project 17 33761442 33761888 + Kank3 protein_coding retained_intron MGP_129S1SvImJ_T0046938.1 MGP_129S1SvImJ_G0023537.1 mouse_genomes_project 17 33761755 33762530 + MGP_129S1SvImJ_P0046938 Kank3 protein_coding protein_coding MGP_129S1SvImJ_T0003780.1 MGP_129S1SvImJ_G0003403.1 mouse_genomes_project 17 36259690 36356067 + antisense antisense MGP_129S1SvImJ_T0046507.1 MGP_129S1SvImJ_G0023435.1 mouse_genomes_project 17 27576004 27601396 + MGP_129S1SvImJ_P0046507 Def6 protein_coding protein_coding MGP_129S1SvImJ_T0046508.1 MGP_129S1SvImJ_G0023435.1 mouse_genomes_project 17 27576063 27583008 + Def6 protein_coding processed_transcript MGP_129S1SvImJ_T0048569.1 MGP_129S1SvImJ_G0024028.1 mouse_genomes_project 17 77024890 77058562 + MGP_129S1SvImJ_P0048569 Slc30a6 protein_coding protein_coding MGP_129S1SvImJ_T0048570.1 MGP_129S1SvImJ_G0024028.1 mouse_genomes_project 17 77024890 77058562 + MGP_129S1SvImJ_P0048570 Slc30a6 protein_coding protein_coding MGP_129S1SvImJ_T0046479.1 MGP_129S1SvImJ_G0023429.1 mouse_genomes_project 17 27195639 27239437 + MGP_129S1SvImJ_P0046479 Uhrf1bp1 protein_coding protein_coding MGP_129S1SvImJ_T0046480.1 MGP_129S1SvImJ_G0023429.1 mouse_genomes_project 17 27196392 27219255 + Uhrf1bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0046481.1 MGP_129S1SvImJ_G0023429.1 mouse_genomes_project 17 27229441 27234703 + Uhrf1bp1 protein_coding processed_transcript MGP_129S1SvImJ_T0003747.1 MGP_129S1SvImJ_G0003377.1 mouse_genomes_project 17 23733323 23733757 - Snhg9 antisense antisense MGP_129S1SvImJ_T0048383.1 MGP_129S1SvImJ_G0023971.1 mouse_genomes_project 17 65915808 65916300 - MGP_129S1SvImJ_P0048383 A930002H24Rik protein_coding protein_coding MGP_129S1SvImJ_T0102314.1 MGP_129S1SvImJ_G0040148.1 mouse_genomes_project 17 33852005 33852395 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0046086.1 MGP_129S1SvImJ_G0023336.1 mouse_genomes_project 17 24047266 24128727 + MGP_129S1SvImJ_P0046086 Ift140 protein_coding protein_coding MGP_129S1SvImJ_T0046087.1 MGP_129S1SvImJ_G0023336.1 mouse_genomes_project 17 24047566 24135465 + MGP_129S1SvImJ_P0046087 Ift140 protein_coding protein_coding MGP_129S1SvImJ_T0046088.1 MGP_129S1SvImJ_G0023336.1 mouse_genomes_project 17 24047574 24050097 + Ift140 protein_coding processed_transcript MGP_129S1SvImJ_T0046089.1 MGP_129S1SvImJ_G0023336.1 mouse_genomes_project 17 24060725 24132701 + Ift140 protein_coding retained_intron MGP_129S1SvImJ_T0046090.1 MGP_129S1SvImJ_G0023336.1 mouse_genomes_project 17 24060961 24072055 + MGP_129S1SvImJ_P0046090 Ift140 protein_coding protein_coding MGP_129S1SvImJ_T0046091.1 MGP_129S1SvImJ_G0023336.1 mouse_genomes_project 17 24079439 24121653 + Ift140 protein_coding processed_transcript MGP_129S1SvImJ_T0046092.1 MGP_129S1SvImJ_G0023336.1 mouse_genomes_project 17 24079488 24135473 + Ift140 protein_coding processed_transcript MGP_129S1SvImJ_T0046095.1 MGP_129S1SvImJ_G0023336.1 mouse_genomes_project 17 24126148 24129070 + Ift140 protein_coding retained_intron MGP_129S1SvImJ_T0045822.1 MGP_129S1SvImJ_G0023265.1 mouse_genomes_project 17 22597959 22599394 - MGP_129S1SvImJ_P0045822 Cldn9 protein_coding protein_coding MGP_129S1SvImJ_T0046833.1 MGP_129S1SvImJ_G0023509.1 mouse_genomes_project 17 32525015 32546278 + MGP_129S1SvImJ_P0046833 Cyp4f40 protein_coding protein_coding MGP_129S1SvImJ_T0047767.1 MGP_129S1SvImJ_G0023772.1 mouse_genomes_project 17 44161930 44197468 + MGP_129S1SvImJ_P0047767 Adgrf1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0013268.1 MGP_129S1SvImJ_G0011357.1 mouse_genomes_project 17 38327934 38330553 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102300.1 MGP_129S1SvImJ_G0040134.1 mouse_genomes_project 17 19982307 19982771 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0010227.1 MGP_129S1SvImJ_G0008343.1 mouse_genomes_project 17 36068263 36068359 - Gm28033 miRNA miRNA MGP_129S1SvImJ_T0045399.1 MGP_129S1SvImJ_G0023099.1 mouse_genomes_project 17 494254 533874 - MGP_129S1SvImJ_P0045399 Tfb1m protein_coding protein_coding MGP_129S1SvImJ_T0003796.1 MGP_129S1SvImJ_G0003414.1 mouse_genomes_project 17 51203263 51207452 - Gm16555 antisense antisense MGP_129S1SvImJ_T0047441.1 MGP_129S1SvImJ_G0023649.1 mouse_genomes_project 17 35840839 35852276 - MGP_129S1SvImJ_P0047441 Vars2 protein_coding protein_coding MGP_129S1SvImJ_T0047442.1 MGP_129S1SvImJ_G0023649.1 mouse_genomes_project 17 35840860 35850950 - Vars2 protein_coding retained_intron MGP_129S1SvImJ_T0047443.1 MGP_129S1SvImJ_G0023649.1 mouse_genomes_project 17 35841592 35848154 - MGP_129S1SvImJ_P0047443 Vars2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047444.1 MGP_129S1SvImJ_G0023649.1 mouse_genomes_project 17 35841759 35847696 - MGP_129S1SvImJ_P0047444 Vars2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047445.1 MGP_129S1SvImJ_G0023649.1 mouse_genomes_project 17 35841829 35843618 - Vars2 protein_coding retained_intron MGP_129S1SvImJ_T0047446.1 MGP_129S1SvImJ_G0023649.1 mouse_genomes_project 17 35841945 35842720 - Vars2 protein_coding retained_intron MGP_129S1SvImJ_T0047447.1 MGP_129S1SvImJ_G0023649.1 mouse_genomes_project 17 35844757 35845252 - Vars2 protein_coding retained_intron MGP_129S1SvImJ_T0047448.1 MGP_129S1SvImJ_G0023649.1 mouse_genomes_project 17 35844889 35847171 - MGP_129S1SvImJ_P0047448 Vars2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047449.1 MGP_129S1SvImJ_G0023649.1 mouse_genomes_project 17 35845230 35846850 - Vars2 protein_coding retained_intron MGP_129S1SvImJ_T0047450.1 MGP_129S1SvImJ_G0023649.1 mouse_genomes_project 17 35849114 35851421 - Vars2 protein_coding retained_intron MGP_129S1SvImJ_T0047451.1 MGP_129S1SvImJ_G0023649.1 mouse_genomes_project 17 35850804 35852224 - Vars2 protein_coding retained_intron MGP_129S1SvImJ_T0047452.1 MGP_129S1SvImJ_G0023649.1 mouse_genomes_project 17 35850888 35852233 - MGP_129S1SvImJ_P0047452 Vars2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047748.1 MGP_129S1SvImJ_G0023760.1 mouse_genomes_project 17 41569098 41604371 - MGP_129S1SvImJ_P0047748 Crisp2 protein_coding protein_coding MGP_129S1SvImJ_T0047749.1 MGP_129S1SvImJ_G0023760.1 mouse_genomes_project 17 41593422 41604402 - MGP_129S1SvImJ_P0047749 Crisp2 protein_coding protein_coding MGP_129S1SvImJ_T0047750.1 MGP_129S1SvImJ_G0023760.1 mouse_genomes_project 17 41595131 41604332 - MGP_129S1SvImJ_P0047750 Crisp2 protein_coding protein_coding MGP_129S1SvImJ_T0047751.1 MGP_129S1SvImJ_G0023760.1 mouse_genomes_project 17 41595207 41604323 - MGP_129S1SvImJ_P0047751 Crisp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047752.1 MGP_129S1SvImJ_G0023760.1 mouse_genomes_project 17 41603510 41611182 - Crisp2 protein_coding processed_transcript MGP_129S1SvImJ_T0045790.1 MGP_129S1SvImJ_G0023255.1 mouse_genomes_project 17 22291339 22312657 + MGP_129S1SvImJ_P0045790 protein_coding protein_coding MGP_129S1SvImJ_T0046995.1 MGP_129S1SvImJ_G0023548.1 mouse_genomes_project 17 33901404 33902649 - Rps18 protein_coding retained_intron MGP_129S1SvImJ_T0046996.1 MGP_129S1SvImJ_G0023548.1 mouse_genomes_project 17 33901404 33905172 - Rps18 protein_coding processed_transcript MGP_129S1SvImJ_T0046997.1 MGP_129S1SvImJ_G0023548.1 mouse_genomes_project 17 33901404 33905623 - MGP_129S1SvImJ_P0046997 Rps18 protein_coding protein_coding MGP_129S1SvImJ_T0046998.1 MGP_129S1SvImJ_G0023548.1 mouse_genomes_project 17 33901404 33905677 - MGP_129S1SvImJ_P0046998 Rps18 protein_coding protein_coding MGP_129S1SvImJ_T0046999.1 MGP_129S1SvImJ_G0023548.1 mouse_genomes_project 17 33901405 33905620 - Rps18 protein_coding retained_intron MGP_129S1SvImJ_T0047000.1 MGP_129S1SvImJ_G0023548.1 mouse_genomes_project 17 33901405 33904450 - Rps18 protein_coding processed_transcript MGP_129S1SvImJ_T0047001.1 MGP_129S1SvImJ_G0023548.1 mouse_genomes_project 17 33901409 33902501 - Rps18 protein_coding retained_intron MGP_129S1SvImJ_T0047002.1 MGP_129S1SvImJ_G0023548.1 mouse_genomes_project 17 33901674 33905613 - Rps18 protein_coding retained_intron MGP_129S1SvImJ_T0047003.1 MGP_129S1SvImJ_G0023548.1 mouse_genomes_project 17 33904784 33905620 - Rps18 protein_coding retained_intron MGP_129S1SvImJ_T0047004.1 MGP_129S1SvImJ_G0023548.1 mouse_genomes_project 17 33905478 33905961 - Rps18 protein_coding processed_transcript MGP_129S1SvImJ_T0046116.1 MGP_129S1SvImJ_G0023341.1 mouse_genomes_project 17 24204783 24215488 + MGP_129S1SvImJ_P0046116 Ccdc154 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046117.1 MGP_129S1SvImJ_G0023341.1 mouse_genomes_project 17 24204783 24215488 + MGP_129S1SvImJ_P0046117 Ccdc154 protein_coding protein_coding MGP_129S1SvImJ_T0046118.1 MGP_129S1SvImJ_G0023341.1 mouse_genomes_project 17 24204786 24215486 + MGP_129S1SvImJ_P0046118 Ccdc154 protein_coding protein_coding MGP_129S1SvImJ_T0046119.1 MGP_129S1SvImJ_G0023341.1 mouse_genomes_project 17 24205164 24215457 + MGP_129S1SvImJ_P0046119 Ccdc154 protein_coding protein_coding MGP_129S1SvImJ_T0048610.1 MGP_129S1SvImJ_G0024036.1 mouse_genomes_project 17 81010012 81193220 + MGP_129S1SvImJ_P0048610 Crim1 protein_coding protein_coding MGP_129S1SvImJ_T0046333.1 MGP_129S1SvImJ_G0023393.1 mouse_genomes_project 17 25343170 25346259 - MGP_129S1SvImJ_P0046333 Pdia2 protein_coding protein_coding MGP_129S1SvImJ_T0046334.1 MGP_129S1SvImJ_G0023393.1 mouse_genomes_project 17 25343177 25344088 - MGP_129S1SvImJ_P0046334 Pdia2 protein_coding protein_coding MGP_129S1SvImJ_T0046335.1 MGP_129S1SvImJ_G0023393.1 mouse_genomes_project 17 25343196 25346234 - MGP_129S1SvImJ_P0046335 Pdia2 protein_coding protein_coding MGP_129S1SvImJ_T0046337.1 MGP_129S1SvImJ_G0023393.1 mouse_genomes_project 17 25344665 25346180 - MGP_129S1SvImJ_P0046337 Pdia2 protein_coding protein_coding MGP_129S1SvImJ_T0048711.1 MGP_129S1SvImJ_G0024083.1 mouse_genomes_project 17 87887240 87974056 - MGP_129S1SvImJ_P0048711 Lrpprc protein_coding protein_coding MGP_129S1SvImJ_T0048712.1 MGP_129S1SvImJ_G0024083.1 mouse_genomes_project 17 87894770 87913171 - Lrpprc protein_coding processed_transcript MGP_129S1SvImJ_T0048713.1 MGP_129S1SvImJ_G0024083.1 mouse_genomes_project 17 87913166 87934680 - MGP_129S1SvImJ_P0048713 Lrpprc protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048714.1 MGP_129S1SvImJ_G0024083.1 mouse_genomes_project 17 87932198 87934680 - Lrpprc protein_coding retained_intron MGP_129S1SvImJ_T0048715.1 MGP_129S1SvImJ_G0024083.1 mouse_genomes_project 17 87949830 87974287 - Lrpprc protein_coding retained_intron MGP_129S1SvImJ_T0048716.1 MGP_129S1SvImJ_G0024083.1 mouse_genomes_project 17 87950991 87974060 - Lrpprc protein_coding retained_intron MGP_129S1SvImJ_T0048717.1 MGP_129S1SvImJ_G0024083.1 mouse_genomes_project 17 87953890 87961041 - Lrpprc protein_coding processed_transcript MGP_129S1SvImJ_T0047578.1 MGP_129S1SvImJ_G0023669.1 mouse_genomes_project 17 36307189 36315587 - MGP_129S1SvImJ_P0047578 Gm8909 protein_coding protein_coding MGP_129S1SvImJ_T0010238.1 MGP_129S1SvImJ_G0008354.1 mouse_genomes_project 17 65398887 65398971 + Gm24813 miRNA miRNA MGP_129S1SvImJ_T0045708.1 MGP_129S1SvImJ_G0023207.1 mouse_genomes_project 17 19107807 19108704 + MGP_129S1SvImJ_P0045708 Vmn1r224 protein_coding protein_coding MGP_129S1SvImJ_T0006993.1 MGP_129S1SvImJ_G0005754.1 mouse_genomes_project 17 81718240 81731214 + Gm26637 lincRNA lincRNA MGP_129S1SvImJ_T0046760.1 MGP_129S1SvImJ_G0023492.1 mouse_genomes_project 17 31397774 31425136 - MGP_129S1SvImJ_P0046760 Cbs protein_coding protein_coding MGP_129S1SvImJ_T0046761.1 MGP_129S1SvImJ_G0023492.1 mouse_genomes_project 17 31397791 31425102 - MGP_129S1SvImJ_P0046761 Cbs protein_coding protein_coding MGP_129S1SvImJ_T0046762.1 MGP_129S1SvImJ_G0023492.1 mouse_genomes_project 17 31397792 31425102 - MGP_129S1SvImJ_P0046762 Cbs protein_coding protein_coding MGP_129S1SvImJ_T0046763.1 MGP_129S1SvImJ_G0023492.1 mouse_genomes_project 17 31402319 31403028 - Cbs protein_coding retained_intron MGP_129S1SvImJ_T0046764.1 MGP_129S1SvImJ_G0023492.1 mouse_genomes_project 17 31406136 31411403 - Cbs protein_coding processed_transcript MGP_129S1SvImJ_T0046765.1 MGP_129S1SvImJ_G0023492.1 mouse_genomes_project 17 31406661 31408250 - Cbs protein_coding processed_transcript MGP_129S1SvImJ_T0046766.1 MGP_129S1SvImJ_G0023492.1 mouse_genomes_project 17 31410272 31424727 - MGP_129S1SvImJ_P0046766 Cbs protein_coding protein_coding MGP_129S1SvImJ_T0046767.1 MGP_129S1SvImJ_G0023492.1 mouse_genomes_project 17 31410326 31424586 - MGP_129S1SvImJ_P0046767 Cbs protein_coding protein_coding MGP_129S1SvImJ_T0046768.1 MGP_129S1SvImJ_G0023492.1 mouse_genomes_project 17 31412739 31424586 - MGP_129S1SvImJ_P0046768 Cbs protein_coding protein_coding MGP_129S1SvImJ_T0100823.1 MGP_129S1SvImJ_G0038890.1 mouse_genomes_project 17 29564445 29564553 - Gm22327 snoRNA snoRNA MGP_129S1SvImJ_T0048399.1 MGP_129S1SvImJ_G0023980.1 mouse_genomes_project 17 67936576 67958501 + MGP_129S1SvImJ_P0048399 Ppp4r1 protein_coding protein_coding MGP_129S1SvImJ_T0048400.1 MGP_129S1SvImJ_G0023980.1 mouse_genomes_project 17 67936783 67968001 + MGP_129S1SvImJ_P0048400 Ppp4r1 protein_coding protein_coding MGP_129S1SvImJ_T0048401.1 MGP_129S1SvImJ_G0023980.1 mouse_genomes_project 17 67954638 67965157 + Ppp4r1 protein_coding processed_transcript MGP_129S1SvImJ_T0048402.1 MGP_129S1SvImJ_G0023980.1 mouse_genomes_project 17 67957333 67965130 + Ppp4r1 protein_coding retained_intron MGP_129S1SvImJ_T0048403.1 MGP_129S1SvImJ_G0023980.1 mouse_genomes_project 17 67957703 67997684 + MGP_129S1SvImJ_P0048403 Ppp4r1 protein_coding protein_coding MGP_129S1SvImJ_T0048404.1 MGP_129S1SvImJ_G0023980.1 mouse_genomes_project 17 67957704 67997680 + MGP_129S1SvImJ_P0048404 Ppp4r1 protein_coding protein_coding MGP_129S1SvImJ_T0048405.1 MGP_129S1SvImJ_G0023980.1 mouse_genomes_project 17 67957748 67997679 + MGP_129S1SvImJ_P0048405 Ppp4r1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048406.1 MGP_129S1SvImJ_G0023980.1 mouse_genomes_project 17 67957799 67968227 + MGP_129S1SvImJ_P0048406 Ppp4r1 protein_coding protein_coding MGP_129S1SvImJ_T0048407.1 MGP_129S1SvImJ_G0023980.1 mouse_genomes_project 17 67971535 67986697 + Ppp4r1 protein_coding processed_transcript MGP_129S1SvImJ_T0048408.1 MGP_129S1SvImJ_G0023980.1 mouse_genomes_project 17 67975829 67997614 + Ppp4r1 protein_coding processed_transcript MGP_129S1SvImJ_T0048409.1 MGP_129S1SvImJ_G0023980.1 mouse_genomes_project 17 67980230 67988804 + MGP_129S1SvImJ_P0048409 Ppp4r1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048410.1 MGP_129S1SvImJ_G0023980.1 mouse_genomes_project 17 67984645 67988740 + Ppp4r1 protein_coding retained_intron MGP_129S1SvImJ_T0048411.1 MGP_129S1SvImJ_G0023980.1 mouse_genomes_project 17 67993647 67994739 + MGP_129S1SvImJ_P0048411 Ppp4r1 protein_coding protein_coding MGP_129S1SvImJ_T0046037.1 MGP_129S1SvImJ_G0023326.1 mouse_genomes_project 17 23904216 23907455 + MGP_129S1SvImJ_P0046037 Igfals protein_coding protein_coding MGP_129S1SvImJ_T0047663.1 MGP_129S1SvImJ_G0023695.1 mouse_genomes_project 17 37413705 37442750 + MGP_129S1SvImJ_P0047663 Gabbr1 protein_coding protein_coding MGP_129S1SvImJ_T0047664.1 MGP_129S1SvImJ_G0023695.1 mouse_genomes_project 17 37413759 37441973 + MGP_129S1SvImJ_P0047664 Gabbr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047665.1 MGP_129S1SvImJ_G0023695.1 mouse_genomes_project 17 37413767 37417207 + MGP_129S1SvImJ_P0047665 Gabbr1 protein_coding protein_coding MGP_129S1SvImJ_T0047666.1 MGP_129S1SvImJ_G0023695.1 mouse_genomes_project 17 37413938 37414580 + Gabbr1 protein_coding retained_intron MGP_129S1SvImJ_T0047667.1 MGP_129S1SvImJ_G0023695.1 mouse_genomes_project 17 37414307 37417207 + MGP_129S1SvImJ_P0047667 Gabbr1 protein_coding protein_coding MGP_129S1SvImJ_T0047668.1 MGP_129S1SvImJ_G0023695.1 mouse_genomes_project 17 37416317 37418867 + Gabbr1 protein_coding processed_transcript MGP_129S1SvImJ_T0047669.1 MGP_129S1SvImJ_G0023695.1 mouse_genomes_project 17 37418370 37441987 + MGP_129S1SvImJ_P0047669 Gabbr1 protein_coding protein_coding MGP_129S1SvImJ_T0047670.1 MGP_129S1SvImJ_G0023695.1 mouse_genomes_project 17 37418413 37424105 + MGP_129S1SvImJ_P0047670 Gabbr1 protein_coding protein_coding MGP_129S1SvImJ_T0047671.1 MGP_129S1SvImJ_G0023695.1 mouse_genomes_project 17 37423459 37424612 + Gabbr1 protein_coding retained_intron MGP_129S1SvImJ_T0047672.1 MGP_129S1SvImJ_G0023695.1 mouse_genomes_project 17 37430722 37432596 + Gabbr1 protein_coding retained_intron MGP_129S1SvImJ_T0047673.1 MGP_129S1SvImJ_G0023695.1 mouse_genomes_project 17 37438144 37439909 + Gabbr1 protein_coding retained_intron MGP_129S1SvImJ_T0013267.1 MGP_129S1SvImJ_G0011356.1 mouse_genomes_project 17 38207748 38208121 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013296.1 MGP_129S1SvImJ_G0011385.1 mouse_genomes_project 17 65398136 65398627 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013243.1 MGP_129S1SvImJ_G0011332.1 mouse_genomes_project 17 21598054 21598472 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048779.1 MGP_129S1SvImJ_G0024106.1 mouse_genomes_project 17 91181626 91232226 - MGP_129S1SvImJ_P0048779 Kcnk12 protein_coding protein_coding MGP_129S1SvImJ_T0048548.1 MGP_129S1SvImJ_G0024016.1 mouse_genomes_project 17 75363979 75378462 + MGP_129S1SvImJ_P0048548 Ypel5 protein_coding protein_coding MGP_129S1SvImJ_T0045547.1 MGP_129S1SvImJ_G0023149.1 mouse_genomes_project 17 10345661 10434593 - MGP_129S1SvImJ_P0045547 Igf2r protein_coding protein_coding MGP_129S1SvImJ_T0045548.1 MGP_129S1SvImJ_G0023149.1 mouse_genomes_project 17 10362418 10365171 - MGP_129S1SvImJ_P0045548 Igf2r protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045549.1 MGP_129S1SvImJ_G0023149.1 mouse_genomes_project 17 10413737 10416528 - MGP_129S1SvImJ_P0045549 Igf2r protein_coding protein_coding MGP_129S1SvImJ_T0046155.1 MGP_129S1SvImJ_G0023349.1 mouse_genomes_project 17 24353726 24355494 + MGP_129S1SvImJ_P0046155 Prss34 protein_coding protein_coding MGP_129S1SvImJ_T0101867.1 MGP_129S1SvImJ_G0039803.1 mouse_genomes_project 17 11274297 11275752 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0046529.1 MGP_129S1SvImJ_G0023438.1 mouse_genomes_project 17 27716984 27719667 + MGP_129S1SvImJ_P0046529 Rpl10a protein_coding protein_coding MGP_129S1SvImJ_T0046530.1 MGP_129S1SvImJ_G0023438.1 mouse_genomes_project 17 27717096 27718152 + Rpl10a protein_coding retained_intron MGP_129S1SvImJ_T0046531.1 MGP_129S1SvImJ_G0023438.1 mouse_genomes_project 17 27717097 27719667 + MGP_129S1SvImJ_P0046531 Rpl10a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046532.1 MGP_129S1SvImJ_G0023438.1 mouse_genomes_project 17 27717123 27717909 + Rpl10a protein_coding retained_intron MGP_129S1SvImJ_T0046533.1 MGP_129S1SvImJ_G0023438.1 mouse_genomes_project 17 27717160 27718036 + Rpl10a protein_coding retained_intron MGP_129S1SvImJ_T0046534.1 MGP_129S1SvImJ_G0023438.1 mouse_genomes_project 17 27717324 27719332 + Rpl10a protein_coding retained_intron MGP_129S1SvImJ_T0046535.1 MGP_129S1SvImJ_G0023438.1 mouse_genomes_project 17 27717791 27719662 + Rpl10a protein_coding retained_intron MGP_129S1SvImJ_T0048009.1 MGP_129S1SvImJ_G0023841.1 mouse_genomes_project 17 48505722 48516105 + MGP_129S1SvImJ_P0048009 Mrps10 protein_coding protein_coding MGP_129S1SvImJ_T0048010.1 MGP_129S1SvImJ_G0023841.1 mouse_genomes_project 17 48505727 48513371 + Mrps10 protein_coding retained_intron MGP_129S1SvImJ_T0048011.1 MGP_129S1SvImJ_G0023841.1 mouse_genomes_project 17 48505728 48512492 + MGP_129S1SvImJ_P0048011 Mrps10 protein_coding protein_coding MGP_129S1SvImJ_T0048012.1 MGP_129S1SvImJ_G0023841.1 mouse_genomes_project 17 48505733 48513415 + Mrps10 protein_coding retained_intron MGP_129S1SvImJ_T0048013.1 MGP_129S1SvImJ_G0023841.1 mouse_genomes_project 17 48505742 48519711 + MGP_129S1SvImJ_P0048013 Mrps10 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048014.1 MGP_129S1SvImJ_G0023841.1 mouse_genomes_project 17 48506032 48516105 + MGP_129S1SvImJ_P0048014 Mrps10 protein_coding protein_coding MGP_129S1SvImJ_T0048015.1 MGP_129S1SvImJ_G0023841.1 mouse_genomes_project 17 48506032 48516104 + MGP_129S1SvImJ_P0048015 Mrps10 protein_coding protein_coding MGP_129S1SvImJ_T0048016.1 MGP_129S1SvImJ_G0023841.1 mouse_genomes_project 17 48508274 48515225 + Mrps10 protein_coding retained_intron MGP_129S1SvImJ_T0048017.1 MGP_129S1SvImJ_G0023841.1 mouse_genomes_project 17 48509883 48515245 + Mrps10 protein_coding processed_transcript MGP_129S1SvImJ_T0048018.1 MGP_129S1SvImJ_G0023841.1 mouse_genomes_project 17 48512896 48519710 + Mrps10 protein_coding retained_intron MGP_129S1SvImJ_T0102359.1 MGP_129S1SvImJ_G0040193.1 mouse_genomes_project 17 37779871 37780798 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0045718.1 MGP_129S1SvImJ_G0023217.1 mouse_genomes_project 17 19591046 19591982 - MGP_129S1SvImJ_P0045718 Vmn1r231 protein_coding protein_coding MGP_129S1SvImJ_T0011450.1 MGP_129S1SvImJ_G0009566.1 mouse_genomes_project 17 48104584 48104878 - Gm23657 misc_RNA misc_RNA MGP_129S1SvImJ_T0048309.1 MGP_129S1SvImJ_G0023933.1 mouse_genomes_project 17 58331122 58373901 + MGP_129S1SvImJ_P0048309 Catsperd protein_coding protein_coding MGP_129S1SvImJ_T0048680.1 MGP_129S1SvImJ_G0024071.1 mouse_genomes_project 17 86285042 86296625 + MGP_129S1SvImJ_P0048680 Pkdcc protein_coding protein_coding MGP_129S1SvImJ_T0048681.1 MGP_129S1SvImJ_G0024071.1 mouse_genomes_project 17 86290708 86292347 + Pkdcc protein_coding processed_transcript MGP_129S1SvImJ_T0048682.1 MGP_129S1SvImJ_G0024071.1 mouse_genomes_project 17 86290708 86295841 + MGP_129S1SvImJ_P0048682 Pkdcc protein_coding protein_coding MGP_129S1SvImJ_T0048683.1 MGP_129S1SvImJ_G0024071.1 mouse_genomes_project 17 86291639 86296152 + Pkdcc protein_coding processed_transcript MGP_129S1SvImJ_T0098843.1 MGP_129S1SvImJ_G0036923.1 mouse_genomes_project 17 65353613 65362183 - 4930405O22Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0098844.1 MGP_129S1SvImJ_G0036923.1 mouse_genomes_project 17 65353846 65362185 - 4930405O22Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0047691.1 MGP_129S1SvImJ_G0023712.1 mouse_genomes_project 17 37850350 37851388 + MGP_129S1SvImJ_P0047691 protein_coding protein_coding MGP_129S1SvImJ_T0045816.1 MGP_129S1SvImJ_G0023262.1 mouse_genomes_project 17 22588970 22590602 + MGP_129S1SvImJ_P0045816 Hcfc1r1 protein_coding protein_coding MGP_129S1SvImJ_T0045817.1 MGP_129S1SvImJ_G0023262.1 mouse_genomes_project 17 22588982 22590602 + MGP_129S1SvImJ_P0045817 Hcfc1r1 protein_coding protein_coding MGP_129S1SvImJ_T0045818.1 MGP_129S1SvImJ_G0023262.1 mouse_genomes_project 17 22589001 22590549 + MGP_129S1SvImJ_P0045818 Hcfc1r1 protein_coding protein_coding MGP_129S1SvImJ_T0001023.1 MGP_129S1SvImJ_G0000952.1 mouse_genomes_project 17 87141228 87145293 - TEC TEC MGP_129S1SvImJ_T0048642.1 MGP_129S1SvImJ_G0024049.1 mouse_genomes_project 17 81891861 81932873 + MGP_129S1SvImJ_P0048642 Qpct protein_coding protein_coding MGP_129S1SvImJ_T0045733.1 MGP_129S1SvImJ_G0023226.1 mouse_genomes_project 17 20060709 20061659 + MGP_129S1SvImJ_P0045733 Vmn1r237 protein_coding protein_coding MGP_129S1SvImJ_T0006985.1 MGP_129S1SvImJ_G0005748.1 mouse_genomes_project 17 71748972 71777373 - A930029G22Rik lincRNA lincRNA MGP_129S1SvImJ_T0102328.1 MGP_129S1SvImJ_G0040162.1 mouse_genomes_project 17 35464903 35467015 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0007006.1 MGP_129S1SvImJ_G0005764.1 mouse_genomes_project 17 95196222 95237364 + Gm15404 lincRNA lincRNA MGP_129S1SvImJ_T0048324.1 MGP_129S1SvImJ_G0023943.1 mouse_genomes_project 17 58630244 58676719 - MGP_129S1SvImJ_P0048324 Mllt1 protein_coding protein_coding MGP_129S1SvImJ_T0047217.1 MGP_129S1SvImJ_G0023592.1 mouse_genomes_project 17 34962207 34968186 + MGP_129S1SvImJ_P0047217 Nelfe protein_coding protein_coding MGP_129S1SvImJ_T0047218.1 MGP_129S1SvImJ_G0023592.1 mouse_genomes_project 17 34962214 34968071 + MGP_129S1SvImJ_P0047218 Nelfe protein_coding protein_coding MGP_129S1SvImJ_T0047219.1 MGP_129S1SvImJ_G0023592.1 mouse_genomes_project 17 34962224 34965906 + MGP_129S1SvImJ_P0047219 Nelfe protein_coding protein_coding MGP_129S1SvImJ_T0047220.1 MGP_129S1SvImJ_G0023592.1 mouse_genomes_project 17 34962224 34968189 + MGP_129S1SvImJ_P0047220 Nelfe protein_coding protein_coding MGP_129S1SvImJ_T0047221.1 MGP_129S1SvImJ_G0023592.1 mouse_genomes_project 17 34964424 34965686 + Nelfe protein_coding retained_intron MGP_129S1SvImJ_T0047222.1 MGP_129S1SvImJ_G0023592.1 mouse_genomes_project 17 34965752 34966343 + Nelfe protein_coding retained_intron MGP_129S1SvImJ_T0047223.1 MGP_129S1SvImJ_G0023592.1 mouse_genomes_project 17 34966072 34966571 + Nelfe protein_coding retained_intron MGP_129S1SvImJ_T0048743.1 MGP_129S1SvImJ_G0024098.1 mouse_genomes_project 17 90376557 90391097 + MGP_129S1SvImJ_P0048743 Cript protein_coding protein_coding MGP_129S1SvImJ_T0048744.1 MGP_129S1SvImJ_G0024098.1 mouse_genomes_project 17 90376617 90379243 + Cript protein_coding retained_intron MGP_129S1SvImJ_T0048745.1 MGP_129S1SvImJ_G0024098.1 mouse_genomes_project 17 90376618 90390759 + MGP_129S1SvImJ_P0048745 Cript protein_coding protein_coding MGP_129S1SvImJ_T0013238.1 MGP_129S1SvImJ_G0011327.1 mouse_genomes_project 17 11633170 11633682 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048538.1 MGP_129S1SvImJ_G0024012.1 mouse_genomes_project 17 74144873 74158170 + Fam179a protein_coding processed_transcript MGP_129S1SvImJ_T0048539.1 MGP_129S1SvImJ_G0024012.1 mouse_genomes_project 17 74144873 74206148 + MGP_129S1SvImJ_P0048539 Fam179a protein_coding protein_coding MGP_129S1SvImJ_T0048540.1 MGP_129S1SvImJ_G0024012.1 mouse_genomes_project 17 74144877 74162136 + Fam179a protein_coding processed_transcript MGP_129S1SvImJ_T0048541.1 MGP_129S1SvImJ_G0024012.1 mouse_genomes_project 17 74157802 74206148 + MGP_129S1SvImJ_P0048541 Fam179a protein_coding protein_coding MGP_129S1SvImJ_T0048542.1 MGP_129S1SvImJ_G0024012.1 mouse_genomes_project 17 74159672 74206022 + MGP_129S1SvImJ_P0048542 Fam179a protein_coding protein_coding MGP_129S1SvImJ_T0048543.1 MGP_129S1SvImJ_G0024012.1 mouse_genomes_project 17 74187781 74206148 + Fam179a protein_coding retained_intron MGP_129S1SvImJ_T0048346.1 MGP_129S1SvImJ_G0023953.1 mouse_genomes_project 17 58821768 58834299 - MGP_129S1SvImJ_P0048346 Dennd1c protein_coding protein_coding MGP_129S1SvImJ_T0099559.1 MGP_129S1SvImJ_G0037626.1 mouse_genomes_project 17 35883948 35884055 - Gm23864 snRNA snRNA MGP_129S1SvImJ_T0003782.1 MGP_129S1SvImJ_G0003405.1 mouse_genomes_project 17 37275614 37288802 + 1700031A10Rik antisense antisense MGP_129S1SvImJ_T0047674.1 MGP_129S1SvImJ_G0023696.1 mouse_genomes_project 17 37452255 37453301 - MGP_129S1SvImJ_P0047674 Olfr90 protein_coding protein_coding MGP_129S1SvImJ_T0048668.1 MGP_129S1SvImJ_G0024063.1 mouse_genomes_project 17 83292122 83292446 - MGP_129S1SvImJ_P0048668 Gm10190 protein_coding protein_coding MGP_129S1SvImJ_T0010211.1 MGP_129S1SvImJ_G0008327.1 mouse_genomes_project 17 26638100 26638159 + Mir7218 miRNA miRNA MGP_129S1SvImJ_T0013300.1 MGP_129S1SvImJ_G0011389.1 mouse_genomes_project 17 70682938 70683469 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0047910.1 MGP_129S1SvImJ_G0023806.1 mouse_genomes_project 17 47250262 47288739 + MGP_129S1SvImJ_P0047910 Xpo5 protein_coding protein_coding MGP_129S1SvImJ_T0045997.1 MGP_129S1SvImJ_G0023316.1 mouse_genomes_project 17 23708700 23720848 - MGP_129S1SvImJ_P0045997 Tbl3 protein_coding protein_coding MGP_129S1SvImJ_T0046006.1 MGP_129S1SvImJ_G0023316.1 mouse_genomes_project 17 23711214 23720819 - Tbl3 protein_coding retained_intron MGP_129S1SvImJ_T0046007.1 MGP_129S1SvImJ_G0023316.1 mouse_genomes_project 17 23711643 23713265 - MGP_129S1SvImJ_P0046007 Tbl3 protein_coding protein_coding MGP_129S1SvImJ_T0046008.1 MGP_129S1SvImJ_G0023316.1 mouse_genomes_project 17 23712775 23714098 - Tbl3 protein_coding retained_intron MGP_129S1SvImJ_T0048326.1 MGP_129S1SvImJ_G0023945.1 mouse_genomes_project 17 58734671 58740750 + MGP_129S1SvImJ_P0048326 Clpp protein_coding protein_coding MGP_129S1SvImJ_T0048561.1 MGP_129S1SvImJ_G0024023.1 mouse_genomes_project 17 76608654 76640363 - MGP_129S1SvImJ_P0048561 Srd5a2 protein_coding protein_coding MGP_129S1SvImJ_T0046141.1 MGP_129S1SvImJ_G0023348.1 mouse_genomes_project 17 24312826 24328178 - MGP_129S1SvImJ_P0046141 Ube2i protein_coding protein_coding MGP_129S1SvImJ_T0046142.1 MGP_129S1SvImJ_G0023348.1 mouse_genomes_project 17 24312831 24327226 - MGP_129S1SvImJ_P0046142 Ube2i protein_coding protein_coding MGP_129S1SvImJ_T0046143.1 MGP_129S1SvImJ_G0023348.1 mouse_genomes_project 17 24313085 24328178 - MGP_129S1SvImJ_P0046143 Ube2i protein_coding protein_coding MGP_129S1SvImJ_T0046144.1 MGP_129S1SvImJ_G0023348.1 mouse_genomes_project 17 24313089 24327757 - MGP_129S1SvImJ_P0046144 Ube2i protein_coding protein_coding MGP_129S1SvImJ_T0046145.1 MGP_129S1SvImJ_G0023348.1 mouse_genomes_project 17 24313089 24319695 - MGP_129S1SvImJ_P0046145 Ube2i protein_coding protein_coding MGP_129S1SvImJ_T0046146.1 MGP_129S1SvImJ_G0023348.1 mouse_genomes_project 17 24313216 24327377 - MGP_129S1SvImJ_P0046146 Ube2i protein_coding protein_coding MGP_129S1SvImJ_T0046147.1 MGP_129S1SvImJ_G0023348.1 mouse_genomes_project 17 24316274 24328492 - MGP_129S1SvImJ_P0046147 Ube2i protein_coding protein_coding MGP_129S1SvImJ_T0046148.1 MGP_129S1SvImJ_G0023348.1 mouse_genomes_project 17 24318295 24319162 - Ube2i protein_coding retained_intron MGP_129S1SvImJ_T0046149.1 MGP_129S1SvImJ_G0023348.1 mouse_genomes_project 17 24318965 24327433 - MGP_129S1SvImJ_P0046149 Ube2i protein_coding protein_coding MGP_129S1SvImJ_T0046150.1 MGP_129S1SvImJ_G0023348.1 mouse_genomes_project 17 24320389 24327710 - MGP_129S1SvImJ_P0046150 Ube2i protein_coding protein_coding MGP_129S1SvImJ_T0046151.1 MGP_129S1SvImJ_G0023348.1 mouse_genomes_project 17 24322231 24328170 - MGP_129S1SvImJ_P0046151 Ube2i protein_coding protein_coding MGP_129S1SvImJ_T0046152.1 MGP_129S1SvImJ_G0023348.1 mouse_genomes_project 17 24323076 24327443 - MGP_129S1SvImJ_P0046152 Ube2i protein_coding protein_coding MGP_129S1SvImJ_T0046153.1 MGP_129S1SvImJ_G0023348.1 mouse_genomes_project 17 24323225 24326998 - MGP_129S1SvImJ_P0046153 Ube2i protein_coding protein_coding MGP_129S1SvImJ_T0046154.1 MGP_129S1SvImJ_G0023348.1 mouse_genomes_project 17 24326505 24327102 - Ube2i protein_coding processed_transcript MGP_129S1SvImJ_T0047680.1 MGP_129S1SvImJ_G0023702.1 mouse_genomes_project 17 37585818 37586792 - MGP_129S1SvImJ_P0047680 Olfr95 protein_coding protein_coding MGP_129S1SvImJ_T0045696.1 MGP_129S1SvImJ_G0023195.1 mouse_genomes_project 17 16137041 19070330 + MGP_129S1SvImJ_P0045696 protein_coding protein_coding MGP_129S1SvImJ_T0048619.1 MGP_129S1SvImJ_G0024042.1 mouse_genomes_project 17 81685915 81686374 - protein_coding processed_transcript MGP_129S1SvImJ_T0048620.1 MGP_129S1SvImJ_G0024042.1 mouse_genomes_project 17 81686151 81687200 - protein_coding retained_intron MGP_129S1SvImJ_T0013262.1 MGP_129S1SvImJ_G0011351.1 mouse_genomes_project 17 36811263 36811836 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0046800.1 MGP_129S1SvImJ_G0023503.1 mouse_genomes_project 17 32196096 32224772 - MGP_129S1SvImJ_P0046800 Wiz protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046801.1 MGP_129S1SvImJ_G0023503.1 mouse_genomes_project 17 32196097 32225076 - MGP_129S1SvImJ_P0046801 Wiz protein_coding unknown_likely_coding MGP_129S1SvImJ_T0046802.1 MGP_129S1SvImJ_G0023503.1 mouse_genomes_project 17 32196098 32225013 - MGP_129S1SvImJ_P0046802 Wiz protein_coding protein_coding MGP_129S1SvImJ_T0046803.1 MGP_129S1SvImJ_G0023503.1 mouse_genomes_project 17 32196102 32227225 - MGP_129S1SvImJ_P0046803 Wiz protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046804.1 MGP_129S1SvImJ_G0023503.1 mouse_genomes_project 17 32196690 32205005 - MGP_129S1SvImJ_P0046804 Wiz protein_coding protein_coding MGP_129S1SvImJ_T0046805.1 MGP_129S1SvImJ_G0023503.1 mouse_genomes_project 17 32197065 32223887 - MGP_129S1SvImJ_P0046805 Wiz protein_coding protein_coding MGP_129S1SvImJ_T0046806.1 MGP_129S1SvImJ_G0023503.1 mouse_genomes_project 17 32203716 32206505 - Wiz protein_coding processed_transcript MGP_129S1SvImJ_T0046807.1 MGP_129S1SvImJ_G0023503.1 mouse_genomes_project 17 32203855 32212659 - Wiz protein_coding retained_intron MGP_129S1SvImJ_T0046808.1 MGP_129S1SvImJ_G0023503.1 mouse_genomes_project 17 32203950 32224714 - MGP_129S1SvImJ_P0046808 Wiz protein_coding protein_coding MGP_129S1SvImJ_T0046809.1 MGP_129S1SvImJ_G0023503.1 mouse_genomes_project 17 32210271 32224854 - Wiz protein_coding retained_intron MGP_129S1SvImJ_T0046810.1 MGP_129S1SvImJ_G0023503.1 mouse_genomes_project 17 32211311 32225078 - MGP_129S1SvImJ_P0046810 Wiz protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046811.1 MGP_129S1SvImJ_G0023503.1 mouse_genomes_project 17 32212545 32227210 - MGP_129S1SvImJ_P0046811 Wiz protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046812.1 MGP_129S1SvImJ_G0023503.1 mouse_genomes_project 17 32212659 32227235 - Wiz protein_coding retained_intron MGP_129S1SvImJ_T0046813.1 MGP_129S1SvImJ_G0023503.1 mouse_genomes_project 17 32223700 32226950 - MGP_129S1SvImJ_P0046813 Wiz protein_coding protein_coding MGP_129S1SvImJ_T0047786.1 MGP_129S1SvImJ_G0023780.1 mouse_genomes_project 17 44716679 44971364 + MGP_129S1SvImJ_P0047786 Rcan2 protein_coding protein_coding MGP_129S1SvImJ_T0047787.1 MGP_129S1SvImJ_G0023780.1 mouse_genomes_project 17 44880813 44969263 + MGP_129S1SvImJ_P0047787 Rcan2 protein_coding protein_coding MGP_129S1SvImJ_T0047788.1 MGP_129S1SvImJ_G0023780.1 mouse_genomes_project 17 44881005 44971364 + MGP_129S1SvImJ_P0047788 Rcan2 protein_coding protein_coding MGP_129S1SvImJ_T0046084.1 MGP_129S1SvImJ_G0023334.1 mouse_genomes_project 17 23973962 23990706 - MGP_129S1SvImJ_P0046084 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0006957.1 MGP_129S1SvImJ_G0005732.1 mouse_genomes_project 17 36601931 36607944 + Gm20546 lincRNA lincRNA MGP_129S1SvImJ_T0102336.1 MGP_129S1SvImJ_G0040170.1 mouse_genomes_project 17 36484589 36485510 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0047493.1 MGP_129S1SvImJ_G0023655.1 mouse_genomes_project 17 36038458 36058746 + MGP_129S1SvImJ_P0047493 Mdc1 protein_coding protein_coding MGP_129S1SvImJ_T0047494.1 MGP_129S1SvImJ_G0023655.1 mouse_genomes_project 17 36038603 36058752 + MGP_129S1SvImJ_P0047494 Mdc1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0047495.1 MGP_129S1SvImJ_G0023655.1 mouse_genomes_project 17 36038619 36043965 + MGP_129S1SvImJ_P0047495 Mdc1 protein_coding protein_coding MGP_129S1SvImJ_T0046499.1 MGP_129S1SvImJ_G0023434.1 mouse_genomes_project 17 27542070 27574113 + Zfp523 protein_coding retained_intron MGP_129S1SvImJ_T0046500.1 MGP_129S1SvImJ_G0023434.1 mouse_genomes_project 17 27542202 27574113 + MGP_129S1SvImJ_P0046500 Zfp523 protein_coding protein_coding MGP_129S1SvImJ_T0046501.1 MGP_129S1SvImJ_G0023434.1 mouse_genomes_project 17 27542281 27574111 + MGP_129S1SvImJ_P0046501 Zfp523 protein_coding protein_coding MGP_129S1SvImJ_T0046502.1 MGP_129S1SvImJ_G0023434.1 mouse_genomes_project 17 27554770 27562640 + Zfp523 protein_coding processed_transcript MGP_129S1SvImJ_T0046503.1 MGP_129S1SvImJ_G0023434.1 mouse_genomes_project 17 27562624 27568735 + MGP_129S1SvImJ_P0046503 Zfp523 protein_coding protein_coding MGP_129S1SvImJ_T0046504.1 MGP_129S1SvImJ_G0023434.1 mouse_genomes_project 17 27568547 27573389 + MGP_129S1SvImJ_P0046504 Zfp523 protein_coding protein_coding MGP_129S1SvImJ_T0046505.1 MGP_129S1SvImJ_G0023434.1 mouse_genomes_project 17 27568722 27574113 + MGP_129S1SvImJ_P0046505 Zfp523 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046506.1 MGP_129S1SvImJ_G0023434.1 mouse_genomes_project 17 27572335 27573534 + Zfp523 protein_coding retained_intron MGP_129S1SvImJ_T0102324.1 MGP_129S1SvImJ_G0040158.1 mouse_genomes_project 17 34862389 34863785 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0048314.1 MGP_129S1SvImJ_G0023936.1 mouse_genomes_project 17 58430872 58437359 + MGP_129S1SvImJ_P0048314 Ndufa11 protein_coding protein_coding MGP_129S1SvImJ_T0013264.1 MGP_129S1SvImJ_G0011353.1 mouse_genomes_project 17 37021698 37022266 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001006.1 MGP_129S1SvImJ_G0000936.1 mouse_genomes_project 17 30102182 30103646 + TEC TEC MGP_129S1SvImJ_T0001007.1 MGP_129S1SvImJ_G0000936.1 mouse_genomes_project 17 30103032 30103485 + TEC TEC MGP_129S1SvImJ_T0047713.1 MGP_129S1SvImJ_G0023731.1 mouse_genomes_project 17 38401820 38405682 + MGP_129S1SvImJ_P0047713 protein_coding protein_coding MGP_129S1SvImJ_T0102338.1 MGP_129S1SvImJ_G0040172.1 mouse_genomes_project 17 36505751 36509728 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0046195.1 MGP_129S1SvImJ_G0023361.1 mouse_genomes_project 17 24810132 24818618 - MGP_129S1SvImJ_P0046195 Chtf18 protein_coding protein_coding MGP_129S1SvImJ_T0046196.1 MGP_129S1SvImJ_G0023361.1 mouse_genomes_project 17 24810132 24818570 - MGP_129S1SvImJ_P0046196 Chtf18 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046197.1 MGP_129S1SvImJ_G0023361.1 mouse_genomes_project 17 24810236 24818565 - Chtf18 protein_coding retained_intron MGP_129S1SvImJ_T0046198.1 MGP_129S1SvImJ_G0023361.1 mouse_genomes_project 17 24810252 24812107 - MGP_129S1SvImJ_P0046198 Chtf18 protein_coding protein_coding MGP_129S1SvImJ_T0046199.1 MGP_129S1SvImJ_G0023361.1 mouse_genomes_project 17 24810253 24810992 - MGP_129S1SvImJ_P0046199 Chtf18 protein_coding protein_coding MGP_129S1SvImJ_T0046200.1 MGP_129S1SvImJ_G0023361.1 mouse_genomes_project 17 24811474 24812104 - Chtf18 protein_coding retained_intron MGP_129S1SvImJ_T0046201.1 MGP_129S1SvImJ_G0023361.1 mouse_genomes_project 17 24816774 24818609 - MGP_129S1SvImJ_P0046201 Chtf18 protein_coding protein_coding MGP_129S1SvImJ_T0003748.1 MGP_129S1SvImJ_G0003378.1 mouse_genomes_project 17 25739102 25747489 - 1700049J03Rik antisense antisense MGP_129S1SvImJ_T0045861.1 MGP_129S1SvImJ_G0023280.1 mouse_genomes_project 17 22851734 22854207 + MGP_129S1SvImJ_P0045861 protein_coding protein_coding MGP_129S1SvImJ_T0047496.1 MGP_129S1SvImJ_G0023656.1 mouse_genomes_project 17 36060394 36065364 + MGP_129S1SvImJ_P0047496 Nrm protein_coding protein_coding MGP_129S1SvImJ_T0047497.1 MGP_129S1SvImJ_G0023656.1 mouse_genomes_project 17 36060414 36064625 + MGP_129S1SvImJ_P0047497 Nrm protein_coding protein_coding MGP_129S1SvImJ_T0047498.1 MGP_129S1SvImJ_G0023656.1 mouse_genomes_project 17 36060562 36064565 + MGP_129S1SvImJ_P0047498 Nrm protein_coding protein_coding MGP_129S1SvImJ_T0003772.1 MGP_129S1SvImJ_G0003395.1 mouse_genomes_project 17 34679871 34680305 + Gm20463 antisense antisense MGP_129S1SvImJ_T0048003.1 MGP_129S1SvImJ_G0023838.1 mouse_genomes_project 17 48020706 48035191 + MGP_129S1SvImJ_P0048003 Prph2 protein_coding protein_coding MGP_129S1SvImJ_T0048004.1 MGP_129S1SvImJ_G0023838.1 mouse_genomes_project 17 48020725 48030604 + Prph2 protein_coding retained_intron MGP_129S1SvImJ_T0100845.1 MGP_129S1SvImJ_G0038912.1 mouse_genomes_project 17 95462555 95462685 - Gm24244 snoRNA snoRNA MGP_129S1SvImJ_T0048659.1 MGP_129S1SvImJ_G0024058.1 mouse_genomes_project 17 83114886 83125218 + MGP_129S1SvImJ_P0048659 Ttc39d protein_coding protein_coding MGP_129S1SvImJ_T0048660.1 MGP_129S1SvImJ_G0024058.1 mouse_genomes_project 17 83123195 83125217 + MGP_129S1SvImJ_P0048660 Ttc39d protein_coding protein_coding MGP_129S1SvImJ_T0010235.1 MGP_129S1SvImJ_G0008351.1 mouse_genomes_project 17 57901759 57901870 + Mir7b miRNA miRNA MGP_129S1SvImJ_T0047710.1 MGP_129S1SvImJ_G0023728.1 mouse_genomes_project 17 38291357 38292298 + MGP_129S1SvImJ_P0047710 Olfr123 protein_coding protein_coding MGP_129S1SvImJ_T0046698.1 MGP_129S1SvImJ_G0023474.1 mouse_genomes_project 17 29647173 29805725 + MGP_129S1SvImJ_P0046698 Zfand3 protein_coding protein_coding MGP_129S1SvImJ_T0047734.1 MGP_129S1SvImJ_G0023746.1 mouse_genomes_project 17 39653846 39657194 - MGP_129S1SvImJ_P0047734 Esp23 protein_coding protein_coding MGP_129S1SvImJ_T0006943.1 MGP_129S1SvImJ_G0005720.1 mouse_genomes_project 17 33717672 33720420 - 4931413I07Rik lincRNA lincRNA MGP_129S1SvImJ_T0047384.1 MGP_129S1SvImJ_G0023627.1 mouse_genomes_project 17 35342969 35344833 + MGP_129S1SvImJ_P0047384 Ltb protein_coding protein_coding MGP_129S1SvImJ_T0047385.1 MGP_129S1SvImJ_G0023627.1 mouse_genomes_project 17 35343053 35344836 + Ltb protein_coding retained_intron MGP_129S1SvImJ_T0047386.1 MGP_129S1SvImJ_G0023627.1 mouse_genomes_project 17 35343156 35344851 + MGP_129S1SvImJ_P0047386 Ltb protein_coding protein_coding MGP_129S1SvImJ_T0010223.1 MGP_129S1SvImJ_G0008339.1 mouse_genomes_project 17 35343502 35343580 + Mir6973a miRNA miRNA MGP_129S1SvImJ_T0006953.1 MGP_129S1SvImJ_G0005730.1 mouse_genomes_project 17 35960452 35968493 + 4833427F10Rik lincRNA lincRNA MGP_129S1SvImJ_T0048226.1 MGP_129S1SvImJ_G0023907.1 mouse_genomes_project 17 57626780 57634086 + MGP_129S1SvImJ_P0048226 Mpnd protein_coding protein_coding MGP_129S1SvImJ_T0048227.1 MGP_129S1SvImJ_G0023907.1 mouse_genomes_project 17 57631364 57641849 + MGP_129S1SvImJ_P0048227 Mpnd protein_coding protein_coding MGP_129S1SvImJ_T0048228.1 MGP_129S1SvImJ_G0023907.1 mouse_genomes_project 17 57631371 57641705 + MGP_129S1SvImJ_P0048228 Mpnd protein_coding protein_coding MGP_129S1SvImJ_T0048229.1 MGP_129S1SvImJ_G0023907.1 mouse_genomes_project 17 57631394 57641712 + MGP_129S1SvImJ_P0048229 Mpnd protein_coding protein_coding MGP_129S1SvImJ_T0048230.1 MGP_129S1SvImJ_G0023907.1 mouse_genomes_project 17 57631418 57634484 + Mpnd protein_coding retained_intron MGP_129S1SvImJ_T0048231.1 MGP_129S1SvImJ_G0023907.1 mouse_genomes_project 17 57631496 57641673 + MGP_129S1SvImJ_P0048231 Mpnd protein_coding protein_coding MGP_129S1SvImJ_T0048232.1 MGP_129S1SvImJ_G0023907.1 mouse_genomes_project 17 57632096 57633829 + Mpnd protein_coding retained_intron MGP_129S1SvImJ_T0048233.1 MGP_129S1SvImJ_G0023907.1 mouse_genomes_project 17 57632603 57640556 + MGP_129S1SvImJ_P0048233 Mpnd protein_coding protein_coding MGP_129S1SvImJ_T0048234.1 MGP_129S1SvImJ_G0023907.1 mouse_genomes_project 17 57634104 57640169 + Mpnd protein_coding retained_intron MGP_129S1SvImJ_T0048740.1 MGP_129S1SvImJ_G0024096.1 mouse_genomes_project 17 90315870 90352834 + MGP_129S1SvImJ_P0048740 Rhoq protein_coding protein_coding MGP_129S1SvImJ_T0048741.1 MGP_129S1SvImJ_G0024096.1 mouse_genomes_project 17 90316080 90347863 + MGP_129S1SvImJ_P0048741 Rhoq protein_coding protein_coding MGP_129S1SvImJ_T0048704.1 MGP_129S1SvImJ_G0024080.1 mouse_genomes_project 17 87800226 87833188 + MGP_129S1SvImJ_P0048704 Dync2li1 protein_coding protein_coding MGP_129S1SvImJ_T0048220.1 MGP_129S1SvImJ_G0023902.1 mouse_genomes_project 17 57575019 57579578 + MGP_129S1SvImJ_P0048220 Ebi3 protein_coding protein_coding MGP_129S1SvImJ_T0010246.1 MGP_129S1SvImJ_G0008362.1 mouse_genomes_project 17 94715787 94715848 + Gm27475 miRNA miRNA MGP_129S1SvImJ_T0046432.1 MGP_129S1SvImJ_G0023417.1 mouse_genomes_project 17 26373132 26384387 - MGP_129S1SvImJ_P0046432 Uqcc2 protein_coding protein_coding MGP_129S1SvImJ_T0046433.1 MGP_129S1SvImJ_G0023417.1 mouse_genomes_project 17 26373137 26384095 - Uqcc2 protein_coding processed_transcript MGP_129S1SvImJ_T0046434.1 MGP_129S1SvImJ_G0023417.1 mouse_genomes_project 17 26373139 26384374 - MGP_129S1SvImJ_P0046434 Uqcc2 protein_coding protein_coding MGP_129S1SvImJ_T0046435.1 MGP_129S1SvImJ_G0023417.1 mouse_genomes_project 17 26373139 26384101 - MGP_129S1SvImJ_P0046435 Uqcc2 protein_coding protein_coding MGP_129S1SvImJ_T0047683.1 MGP_129S1SvImJ_G0023705.1 mouse_genomes_project 17 37608072 37609131 - MGP_129S1SvImJ_P0047683 Olfr97 protein_coding protein_coding MGP_129S1SvImJ_T0045711.1 MGP_129S1SvImJ_G0023210.1 mouse_genomes_project 17 19240090 19291920 - MGP_129S1SvImJ_P0045711 Vmn2r110 protein_coding protein_coding MGP_129S1SvImJ_T0047066.1 MGP_129S1SvImJ_G0023561.1 mouse_genomes_project 17 34184320 34185840 - Psmb9 protein_coding retained_intron MGP_129S1SvImJ_T0047067.1 MGP_129S1SvImJ_G0023561.1 mouse_genomes_project 17 34184323 34189644 - Psmb9 protein_coding retained_intron MGP_129S1SvImJ_T0047068.1 MGP_129S1SvImJ_G0023561.1 mouse_genomes_project 17 34184326 34189600 - MGP_129S1SvImJ_P0047068 Psmb9 protein_coding protein_coding MGP_129S1SvImJ_T0047069.1 MGP_129S1SvImJ_G0023561.1 mouse_genomes_project 17 34186320 34189629 - Psmb9 protein_coding retained_intron MGP_129S1SvImJ_T0047070.1 MGP_129S1SvImJ_G0023561.1 mouse_genomes_project 17 34186572 34189510 - MGP_129S1SvImJ_P0047070 Psmb9 protein_coding protein_coding MGP_129S1SvImJ_T0047195.1 MGP_129S1SvImJ_G0023590.1 mouse_genomes_project 17 34948844 34950465 + MGP_129S1SvImJ_P0047195 Dxo protein_coding protein_coding MGP_129S1SvImJ_T0047196.1 MGP_129S1SvImJ_G0023590.1 mouse_genomes_project 17 34948844 34951003 + MGP_129S1SvImJ_P0047196 Dxo protein_coding protein_coding MGP_129S1SvImJ_T0047197.1 MGP_129S1SvImJ_G0023590.1 mouse_genomes_project 17 34948844 34951050 + MGP_129S1SvImJ_P0047197 Dxo protein_coding protein_coding MGP_129S1SvImJ_T0047198.1 MGP_129S1SvImJ_G0023590.1 mouse_genomes_project 17 34948907 34950185 + Dxo protein_coding retained_intron MGP_129S1SvImJ_T0047199.1 MGP_129S1SvImJ_G0023590.1 mouse_genomes_project 17 34949073 34949803 + MGP_129S1SvImJ_P0047199 Dxo protein_coding protein_coding MGP_129S1SvImJ_T0047200.1 MGP_129S1SvImJ_G0023590.1 mouse_genomes_project 17 34949224 34950954 + MGP_129S1SvImJ_P0047200 Dxo protein_coding protein_coding MGP_129S1SvImJ_T0047201.1 MGP_129S1SvImJ_G0023590.1 mouse_genomes_project 17 34949482 34950955 + MGP_129S1SvImJ_P0047201 Dxo protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047202.1 MGP_129S1SvImJ_G0023590.1 mouse_genomes_project 17 34949818 34950500 + MGP_129S1SvImJ_P0047202 Dxo protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047203.1 MGP_129S1SvImJ_G0023590.1 mouse_genomes_project 17 34950120 34950954 + MGP_129S1SvImJ_P0047203 Dxo protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047204.1 MGP_129S1SvImJ_G0023590.1 mouse_genomes_project 17 34950149 34950954 + MGP_129S1SvImJ_P0047204 Dxo protein_coding protein_coding MGP_129S1SvImJ_T0047205.1 MGP_129S1SvImJ_G0023590.1 mouse_genomes_project 17 34950269 34950940 + MGP_129S1SvImJ_P0047205 Dxo protein_coding protein_coding MGP_129S1SvImJ_T0048341.1 MGP_129S1SvImJ_G0023952.1 mouse_genomes_project 17 58810376 58821626 + MGP_129S1SvImJ_P0048341 Crb3 protein_coding protein_coding MGP_129S1SvImJ_T0048342.1 MGP_129S1SvImJ_G0023952.1 mouse_genomes_project 17 58817946 58821631 + MGP_129S1SvImJ_P0048342 Crb3 protein_coding protein_coding MGP_129S1SvImJ_T0048343.1 MGP_129S1SvImJ_G0023952.1 mouse_genomes_project 17 58817998 58821630 + MGP_129S1SvImJ_P0048343 Crb3 protein_coding protein_coding MGP_129S1SvImJ_T0048344.1 MGP_129S1SvImJ_G0023952.1 mouse_genomes_project 17 58818014 58821141 + MGP_129S1SvImJ_P0048344 Crb3 protein_coding protein_coding MGP_129S1SvImJ_T0048345.1 MGP_129S1SvImJ_G0023952.1 mouse_genomes_project 17 58818223 58820878 + MGP_129S1SvImJ_P0048345 Crb3 protein_coding protein_coding MGP_129S1SvImJ_T0048448.1 MGP_129S1SvImJ_G0023991.1 mouse_genomes_project 17 69913611 69915370 - MGP_129S1SvImJ_P0048448 Lrrc30 protein_coding protein_coding MGP_129S1SvImJ_T0010220.1 MGP_129S1SvImJ_G0008336.1 mouse_genomes_project 17 34953625 34953688 - Mir6971 miRNA miRNA MGP_129S1SvImJ_T0045623.1 MGP_129S1SvImJ_G0023169.1 mouse_genomes_project 17 12846156 12861948 - MGP_129S1SvImJ_P0045623 protein_coding protein_coding MGP_129S1SvImJ_T0045624.1 MGP_129S1SvImJ_G0023169.1 mouse_genomes_project 17 12846160 12861926 - MGP_129S1SvImJ_P0045624 protein_coding protein_coding MGP_129S1SvImJ_T0048244.1 MGP_129S1SvImJ_G0023911.1 mouse_genomes_project 17 57718574 57744551 + MGP_129S1SvImJ_P0048244 Hdgfrp2 protein_coding protein_coding MGP_129S1SvImJ_T0048245.1 MGP_129S1SvImJ_G0023911.1 mouse_genomes_project 17 57718672 57744408 + MGP_129S1SvImJ_P0048245 Hdgfrp2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048463.1 MGP_129S1SvImJ_G0023998.1 mouse_genomes_project 17 71777394 71842870 + MGP_129S1SvImJ_P0048463 Akain1 protein_coding protein_coding MGP_129S1SvImJ_T0102343.1 MGP_129S1SvImJ_G0040177.1 mouse_genomes_project 17 36887926 36888147 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0045925.1 MGP_129S1SvImJ_G0023295.1 mouse_genomes_project 17 23227987 23331034 - MGP_129S1SvImJ_P0045925 Abca17 protein_coding protein_coding MGP_129S1SvImJ_T0045926.1 MGP_129S1SvImJ_G0023295.1 mouse_genomes_project 17 23228007 23327273 - MGP_129S1SvImJ_P0045926 Abca17 protein_coding protein_coding MGP_129S1SvImJ_T0013244.1 MGP_129S1SvImJ_G0011333.1 mouse_genomes_project 17 23399398 23405997 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010202.1 MGP_129S1SvImJ_G0008318.1 mouse_genomes_project 17 25766917 25767043 - Gm22420 miRNA miRNA MGP_129S1SvImJ_T0048350.1 MGP_129S1SvImJ_G0023957.1 mouse_genomes_project 17 58908928 58912709 - MGP_129S1SvImJ_P0048350 Cd70 protein_coding protein_coding MGP_129S1SvImJ_T0102289.1 MGP_129S1SvImJ_G0040123.1 mouse_genomes_project 17 18234358 18235264 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102302.1 MGP_129S1SvImJ_G0040136.1 mouse_genomes_project 17 20069862 20070598 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0048562.1 MGP_129S1SvImJ_G0024024.1 mouse_genomes_project 17 76800308 76915512 - MGP_129S1SvImJ_P0048562 Memo1 protein_coding protein_coding MGP_129S1SvImJ_T0047600.1 MGP_129S1SvImJ_G0023677.1 mouse_genomes_project 17 36900707 36902879 + MGP_129S1SvImJ_P0047600 H2-M11 protein_coding protein_coding MGP_129S1SvImJ_T0045546.1 MGP_129S1SvImJ_G0023148.1 mouse_genomes_project 17 10312411 10339104 - MGP_129S1SvImJ_P0045546 Slc22a1 protein_coding protein_coding MGP_129S1SvImJ_T0100835.1 MGP_129S1SvImJ_G0038902.1 mouse_genomes_project 17 67048249 67048381 - Gm25344 snoRNA snoRNA MGP_129S1SvImJ_T0048310.1 MGP_129S1SvImJ_G0023934.1 mouse_genomes_project 17 58386426 58424858 + MGP_129S1SvImJ_P0048310 Ranbp3 protein_coding protein_coding MGP_129S1SvImJ_T0048311.1 MGP_129S1SvImJ_G0023934.1 mouse_genomes_project 17 58386591 58424862 + MGP_129S1SvImJ_P0048311 Ranbp3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0047094.1 MGP_129S1SvImJ_G0023568.1 mouse_genomes_project 17 34289193 34294277 - MGP_129S1SvImJ_P0047094 H2-Aa protein_coding protein_coding MGP_129S1SvImJ_T0047095.1 MGP_129S1SvImJ_G0023568.1 mouse_genomes_project 17 34289214 34294241 - MGP_129S1SvImJ_P0047095 H2-Aa protein_coding protein_coding MGP_129S1SvImJ_T0047096.1 MGP_129S1SvImJ_G0023568.1 mouse_genomes_project 17 34290221 34294227 - H2-Aa protein_coding retained_intron MGP_129S1SvImJ_T0047097.1 MGP_129S1SvImJ_G0023568.1 mouse_genomes_project 17 34292914 34294269 - H2-Aa protein_coding processed_transcript MGP_129S1SvImJ_T0046515.1 MGP_129S1SvImJ_G0023437.1 mouse_genomes_project 17 27700507 27715081 + MGP_129S1SvImJ_P0046515 Fance protein_coding protein_coding MGP_129S1SvImJ_T0046516.1 MGP_129S1SvImJ_G0023437.1 mouse_genomes_project 17 27700524 27715081 + Fance protein_coding retained_intron MGP_129S1SvImJ_T0046517.1 MGP_129S1SvImJ_G0023437.1 mouse_genomes_project 17 27700543 27715080 + MGP_129S1SvImJ_P0046517 Fance protein_coding protein_coding MGP_129S1SvImJ_T0046518.1 MGP_129S1SvImJ_G0023437.1 mouse_genomes_project 17 27700549 27715082 + MGP_129S1SvImJ_P0046518 Fance protein_coding protein_coding MGP_129S1SvImJ_T0046519.1 MGP_129S1SvImJ_G0023437.1 mouse_genomes_project 17 27700621 27714767 + MGP_129S1SvImJ_P0046519 Fance protein_coding protein_coding MGP_129S1SvImJ_T0046520.1 MGP_129S1SvImJ_G0023437.1 mouse_genomes_project 17 27704632 27709347 + MGP_129S1SvImJ_P0046520 Fance protein_coding protein_coding MGP_129S1SvImJ_T0046521.1 MGP_129S1SvImJ_G0023437.1 mouse_genomes_project 17 27704669 27705655 + Fance protein_coding retained_intron MGP_129S1SvImJ_T0046522.1 MGP_129S1SvImJ_G0023437.1 mouse_genomes_project 17 27705565 27706785 + Fance protein_coding retained_intron MGP_129S1SvImJ_T0046523.1 MGP_129S1SvImJ_G0023437.1 mouse_genomes_project 17 27706021 27707447 + Fance protein_coding processed_transcript MGP_129S1SvImJ_T0046524.1 MGP_129S1SvImJ_G0023437.1 mouse_genomes_project 17 27706076 27714798 + MGP_129S1SvImJ_P0046524 Fance protein_coding protein_coding MGP_129S1SvImJ_T0046525.1 MGP_129S1SvImJ_G0023437.1 mouse_genomes_project 17 27706375 27709331 + Fance protein_coding retained_intron MGP_129S1SvImJ_T0046526.1 MGP_129S1SvImJ_G0023437.1 mouse_genomes_project 17 27706632 27714963 + MGP_129S1SvImJ_P0046526 Fance protein_coding protein_coding MGP_129S1SvImJ_T0046527.1 MGP_129S1SvImJ_G0023437.1 mouse_genomes_project 17 27706861 27715013 + MGP_129S1SvImJ_P0046527 Fance protein_coding protein_coding MGP_129S1SvImJ_T0046528.1 MGP_129S1SvImJ_G0023437.1 mouse_genomes_project 17 27706970 27715081 + Fance protein_coding processed_transcript MGP_129S1SvImJ_T0045728.1 MGP_129S1SvImJ_G0023221.1 mouse_genomes_project 17 19705495 19724911 + MGP_129S1SvImJ_P0045728 Zfp160 protein_coding protein_coding MGP_129S1SvImJ_T0046372.1 MGP_129S1SvImJ_G0023400.1 mouse_genomes_project 17 25591891 25618855 + MGP_129S1SvImJ_P0046372 Neurl1b protein_coding protein_coding MGP_129S1SvImJ_T0046373.1 MGP_129S1SvImJ_G0023400.1 mouse_genomes_project 17 25591891 25618855 + MGP_129S1SvImJ_P0046373 Neurl1b protein_coding protein_coding MGP_129S1SvImJ_T0046374.1 MGP_129S1SvImJ_G0023400.1 mouse_genomes_project 17 25591972 25623347 + MGP_129S1SvImJ_P0046374 Neurl1b protein_coding protein_coding MGP_129S1SvImJ_T0045713.1 MGP_129S1SvImJ_G0023212.1 mouse_genomes_project 17 19333167 19334199 - MGP_129S1SvImJ_P0045713 Fpr-rs3 protein_coding protein_coding MGP_129S1SvImJ_T0045792.1 MGP_129S1SvImJ_G0023257.1 mouse_genomes_project 17 22472407 22482484 - MGP_129S1SvImJ_P0045792 Zfp13 protein_coding protein_coding MGP_129S1SvImJ_T0045793.1 MGP_129S1SvImJ_G0023257.1 mouse_genomes_project 17 22472414 22500474 - MGP_129S1SvImJ_P0045793 Zfp13 protein_coding protein_coding MGP_129S1SvImJ_T0048332.1 MGP_129S1SvImJ_G0023949.1 mouse_genomes_project 17 58768601 58779028 - MGP_129S1SvImJ_P0048332 Khsrp protein_coding protein_coding MGP_129S1SvImJ_T0047277.1 MGP_129S1SvImJ_G0023605.1 mouse_genomes_project 17 35133521 35148803 + MGP_129S1SvImJ_P0047277 Vars protein_coding protein_coding MGP_129S1SvImJ_T0047278.1 MGP_129S1SvImJ_G0023605.1 mouse_genomes_project 17 35133585 35148511 + MGP_129S1SvImJ_P0047278 Vars protein_coding protein_coding MGP_129S1SvImJ_T0047279.1 MGP_129S1SvImJ_G0023605.1 mouse_genomes_project 17 35133851 35137337 + MGP_129S1SvImJ_P0047279 Vars protein_coding protein_coding MGP_129S1SvImJ_T0047280.1 MGP_129S1SvImJ_G0023605.1 mouse_genomes_project 17 35135191 35137387 + MGP_129S1SvImJ_P0047280 Vars protein_coding protein_coding MGP_129S1SvImJ_T0047281.1 MGP_129S1SvImJ_G0023605.1 mouse_genomes_project 17 35135248 35148803 + Vars protein_coding retained_intron MGP_129S1SvImJ_T0047282.1 MGP_129S1SvImJ_G0023605.1 mouse_genomes_project 17 35136828 35137596 + Vars protein_coding retained_intron MGP_129S1SvImJ_T0047283.1 MGP_129S1SvImJ_G0023605.1 mouse_genomes_project 17 35137246 35137864 + Vars protein_coding retained_intron MGP_129S1SvImJ_T0047284.1 MGP_129S1SvImJ_G0023605.1 mouse_genomes_project 17 35143695 35144880 + Vars protein_coding retained_intron MGP_129S1SvImJ_T0047285.1 MGP_129S1SvImJ_G0023605.1 mouse_genomes_project 17 35144644 35145563 + Vars protein_coding retained_intron MGP_129S1SvImJ_T0047286.1 MGP_129S1SvImJ_G0023605.1 mouse_genomes_project 17 35145763 35146950 + Vars protein_coding retained_intron MGP_129S1SvImJ_T0047287.1 MGP_129S1SvImJ_G0023605.1 mouse_genomes_project 17 35146307 35147528 + MGP_129S1SvImJ_P0047287 Vars protein_coding protein_coding MGP_129S1SvImJ_T0047288.1 MGP_129S1SvImJ_G0023605.1 mouse_genomes_project 17 35146316 35147318 + Vars protein_coding retained_intron MGP_129S1SvImJ_T0047289.1 MGP_129S1SvImJ_G0023605.1 mouse_genomes_project 17 35147445 35148492 + Vars protein_coding retained_intron MGP_129S1SvImJ_T0048675.1 MGP_129S1SvImJ_G0024069.1 mouse_genomes_project 17 84373442 84653845 - MGP_129S1SvImJ_P0048675 Slc8a1 protein_coding protein_coding MGP_129S1SvImJ_T0048676.1 MGP_129S1SvImJ_G0024069.1 mouse_genomes_project 17 84373442 84653845 - MGP_129S1SvImJ_P0048676 Slc8a1 protein_coding protein_coding MGP_129S1SvImJ_T0048677.1 MGP_129S1SvImJ_G0024069.1 mouse_genomes_project 17 84373442 84653845 - MGP_129S1SvImJ_P0048677 Slc8a1 protein_coding protein_coding MGP_129S1SvImJ_T0048678.1 MGP_129S1SvImJ_G0024069.1 mouse_genomes_project 17 84373442 84677809 - MGP_129S1SvImJ_P0048678 Slc8a1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0046669.1 MGP_129S1SvImJ_G0023470.1 mouse_genomes_project 17 29160192 29251109 + MGP_129S1SvImJ_P0046669 Gm28043 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0006952.1 MGP_129S1SvImJ_G0005729.1 mouse_genomes_project 17 35931191 35952138 - Gm20442 lincRNA lincRNA MGP_129S1SvImJ_T0098532.1 MGP_129S1SvImJ_G0036617.1 mouse_genomes_project 17 65146589 65146700 - Gm25348 rRNA rRNA MGP_129S1SvImJ_T0046967.1 MGP_129S1SvImJ_G0023543.1 mouse_genomes_project 17 33865169 33866276 + MGP_129S1SvImJ_P0046967 Zbtb22 protein_coding protein_coding MGP_129S1SvImJ_T0046968.1 MGP_129S1SvImJ_G0023543.1 mouse_genomes_project 17 33865436 33868458 + MGP_129S1SvImJ_P0046968 Zbtb22 protein_coding protein_coding MGP_129S1SvImJ_T0046203.1 MGP_129S1SvImJ_G0023363.1 mouse_genomes_project 17 24829142 24843098 + MGP_129S1SvImJ_P0046203 Mslnl protein_coding protein_coding MGP_129S1SvImJ_T0006905.1 MGP_129S1SvImJ_G0005690.1 mouse_genomes_project 17 7912977 7917915 + 1700110C19Rik lincRNA lincRNA MGP_129S1SvImJ_T0006906.1 MGP_129S1SvImJ_G0005690.1 mouse_genomes_project 17 7912977 7917915 + 1700110C19Rik lincRNA lincRNA MGP_129S1SvImJ_T0047547.1 MGP_129S1SvImJ_G0023662.1 mouse_genomes_project 17 36124013 36125344 + protein_coding retained_intron MGP_129S1SvImJ_T0047548.1 MGP_129S1SvImJ_G0023662.1 mouse_genomes_project 17 36124158 36124920 + protein_coding processed_transcript MGP_129S1SvImJ_T0047549.1 MGP_129S1SvImJ_G0023662.1 mouse_genomes_project 17 36124361 36125938 + protein_coding retained_intron MGP_129S1SvImJ_T0047550.1 MGP_129S1SvImJ_G0023662.1 mouse_genomes_project 17 36124563 36138988 + MGP_129S1SvImJ_P0047550 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0047551.1 MGP_129S1SvImJ_G0023662.1 mouse_genomes_project 17 36124565 36137589 + MGP_129S1SvImJ_P0047551 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0047552.1 MGP_129S1SvImJ_G0023662.1 mouse_genomes_project 17 36124577 36131889 + MGP_129S1SvImJ_P0047552 protein_coding protein_coding MGP_129S1SvImJ_T0047553.1 MGP_129S1SvImJ_G0023662.1 mouse_genomes_project 17 36134089 36135745 + protein_coding retained_intron MGP_129S1SvImJ_T0046637.1 MGP_129S1SvImJ_G0023461.1 mouse_genomes_project 17 28783608 28823148 + MGP_129S1SvImJ_P0046637 BC004004 protein_coding protein_coding MGP_129S1SvImJ_T0046638.1 MGP_129S1SvImJ_G0023461.1 mouse_genomes_project 17 28783663 28821788 + MGP_129S1SvImJ_P0046638 BC004004 protein_coding protein_coding MGP_129S1SvImJ_T0046639.1 MGP_129S1SvImJ_G0023461.1 mouse_genomes_project 17 28783771 28801911 + BC004004 protein_coding retained_intron MGP_129S1SvImJ_T0046640.1 MGP_129S1SvImJ_G0023461.1 mouse_genomes_project 17 28790861 28821792 + MGP_129S1SvImJ_P0046640 BC004004 protein_coding protein_coding MGP_129S1SvImJ_T0046641.1 MGP_129S1SvImJ_G0023461.1 mouse_genomes_project 17 28818569 28821792 + BC004004 protein_coding processed_transcript MGP_129S1SvImJ_T0048221.1 MGP_129S1SvImJ_G0023903.1 mouse_genomes_project 17 57581743 57590499 + MGP_129S1SvImJ_P0048221 Ccdc94 protein_coding protein_coding MGP_129S1SvImJ_T0102291.1 MGP_129S1SvImJ_G0040125.1 mouse_genomes_project 17 18543569 18544468 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0048356.1 MGP_129S1SvImJ_G0023960.1 mouse_genomes_project 17 59007998 59023013 - MGP_129S1SvImJ_P0048356 Gpr108 protein_coding protein_coding MGP_129S1SvImJ_T0010231.1 MGP_129S1SvImJ_G0008347.1 mouse_genomes_project 17 47278607 47278696 + Mir693 miRNA miRNA MGP_129S1SvImJ_T0047818.1 MGP_129S1SvImJ_G0023791.1 mouse_genomes_project 17 46574771 46582226 + MGP_129S1SvImJ_P0047818 Nfkbie protein_coding protein_coding MGP_129S1SvImJ_T0010241.1 MGP_129S1SvImJ_G0008357.1 mouse_genomes_project 17 67627528 67627653 + Gm25731 miRNA miRNA MGP_129S1SvImJ_T0048531.1 MGP_129S1SvImJ_G0024009.1 mouse_genomes_project 17 73951926 73985388 - MGP_129S1SvImJ_P0048531 Ndc80 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048532.1 MGP_129S1SvImJ_G0024009.1 mouse_genomes_project 17 73951930 73986512 - MGP_129S1SvImJ_P0048532 Ndc80 protein_coding protein_coding MGP_129S1SvImJ_T0047967.1 MGP_129S1SvImJ_G0023820.1 mouse_genomes_project 17 47611511 47620719 - MGP_129S1SvImJ_P0047967 Srf protein_coding protein_coding MGP_129S1SvImJ_T0006997.1 MGP_129S1SvImJ_G0005758.1 mouse_genomes_project 17 88154387 88157130 - 1110020A21Rik lincRNA lincRNA MGP_129S1SvImJ_T0045860.1 MGP_129S1SvImJ_G0023279.1 mouse_genomes_project 17 22851734 22854183 + MGP_129S1SvImJ_P0045860 protein_coding protein_coding MGP_129S1SvImJ_T0045862.1 MGP_129S1SvImJ_G0023279.1 mouse_genomes_project 17 22851735 22854206 + MGP_129S1SvImJ_P0045862 protein_coding protein_coding MGP_129S1SvImJ_T0048357.1 MGP_129S1SvImJ_G0023961.1 mouse_genomes_project 17 59024822 59039050 + MGP_129S1SvImJ_P0048357 Trip10 protein_coding protein_coding MGP_129S1SvImJ_T0048358.1 MGP_129S1SvImJ_G0023961.1 mouse_genomes_project 17 59024919 59038501 + MGP_129S1SvImJ_P0048358 Trip10 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0010216.1 MGP_129S1SvImJ_G0008332.1 mouse_genomes_project 17 32225138 32225197 + Gm22201 miRNA miRNA MGP_129S1SvImJ_T0047715.1 MGP_129S1SvImJ_G0023733.1 mouse_genomes_project 17 38570823 38573165 - MGP_129S1SvImJ_P0047715 Olfr129 protein_coding protein_coding MGP_129S1SvImJ_T0047716.1 MGP_129S1SvImJ_G0023733.1 mouse_genomes_project 17 38570823 38577358 - MGP_129S1SvImJ_P0047716 Olfr129 protein_coding protein_coding MGP_129S1SvImJ_T0100842.1 MGP_129S1SvImJ_G0038909.1 mouse_genomes_project 17 86339780 86339915 + Gm24240 snoRNA snoRNA MGP_129S1SvImJ_T0046923.1 MGP_129S1SvImJ_G0023535.1 mouse_genomes_project 17 33672311 33691266 - MGP_129S1SvImJ_P0046923 Rab11b protein_coding protein_coding MGP_129S1SvImJ_T0046924.1 MGP_129S1SvImJ_G0023535.1 mouse_genomes_project 17 33676599 33691042 - MGP_129S1SvImJ_P0046924 Rab11b protein_coding protein_coding MGP_129S1SvImJ_T0046925.1 MGP_129S1SvImJ_G0023535.1 mouse_genomes_project 17 33676662 33680645 - MGP_129S1SvImJ_P0046925 Rab11b protein_coding protein_coding MGP_129S1SvImJ_T0046926.1 MGP_129S1SvImJ_G0023535.1 mouse_genomes_project 17 33677269 33691016 - MGP_129S1SvImJ_P0046926 Rab11b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046927.1 MGP_129S1SvImJ_G0023535.1 mouse_genomes_project 17 33679757 33691220 - Rab11b protein_coding processed_transcript MGP_129S1SvImJ_T0010219.1 MGP_129S1SvImJ_G0008335.1 mouse_genomes_project 17 34863135 34863202 - Gm27471 miRNA miRNA MGP_129S1SvImJ_T0010205.1 MGP_129S1SvImJ_G0008321.1 mouse_genomes_project 17 26159908 26159976 + Mir6968 miRNA miRNA MGP_129S1SvImJ_T0046336.1 MGP_129S1SvImJ_G0023394.1 mouse_genomes_project 17 25343397 25348315 - MGP_129S1SvImJ_P0046336 Arhgdig protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046338.1 MGP_129S1SvImJ_G0023394.1 mouse_genomes_project 17 25346354 25348522 - MGP_129S1SvImJ_P0046338 Arhgdig protein_coding protein_coding MGP_129S1SvImJ_T0046339.1 MGP_129S1SvImJ_G0023394.1 mouse_genomes_project 17 25346568 25348541 - MGP_129S1SvImJ_P0046339 Arhgdig protein_coding protein_coding MGP_129S1SvImJ_T0046340.1 MGP_129S1SvImJ_G0023394.1 mouse_genomes_project 17 25346607 25354932 - Arhgdig protein_coding processed_transcript MGP_129S1SvImJ_T0046341.1 MGP_129S1SvImJ_G0023394.1 mouse_genomes_project 17 25346662 25348316 - Arhgdig protein_coding retained_intron MGP_129S1SvImJ_T0048807.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 93577551 94697102 - MGP_129S1SvImJ_P0048807 Nrxn1 protein_coding protein_coding MGP_129S1SvImJ_T0048808.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 93577564 94701577 - MGP_129S1SvImJ_P0048808 Nrxn1 protein_coding protein_coding MGP_129S1SvImJ_T0048809.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 93579333 93634310 - MGP_129S1SvImJ_P0048809 Nrxn1 protein_coding protein_coding MGP_129S1SvImJ_T0048810.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 93579335 94697110 - MGP_129S1SvImJ_P0048810 Nrxn1 protein_coding protein_coding MGP_129S1SvImJ_T0048811.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 93579733 94019494 - MGP_129S1SvImJ_P0048811 Nrxn1 protein_coding protein_coding MGP_129S1SvImJ_T0048812.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 93580203 93634314 - MGP_129S1SvImJ_P0048812 Nrxn1 protein_coding protein_coding MGP_129S1SvImJ_T0048813.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 93580230 94019508 - MGP_129S1SvImJ_P0048813 Nrxn1 protein_coding protein_coding MGP_129S1SvImJ_T0048814.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 93580603 94696921 - MGP_129S1SvImJ_P0048814 Nrxn1 protein_coding protein_coding MGP_129S1SvImJ_T0048815.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 93580787 93634054 - Nrxn1 protein_coding processed_transcript MGP_129S1SvImJ_T0048816.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 93580810 94696921 - MGP_129S1SvImJ_P0048816 Nrxn1 protein_coding protein_coding MGP_129S1SvImJ_T0048817.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 93580826 94701239 - MGP_129S1SvImJ_P0048817 Nrxn1 protein_coding protein_coding MGP_129S1SvImJ_T0048818.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 93580826 94019572 - MGP_129S1SvImJ_P0048818 Nrxn1 protein_coding protein_coding MGP_129S1SvImJ_T0048819.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 93581254 93750886 - MGP_129S1SvImJ_P0048819 Nrxn1 protein_coding protein_coding MGP_129S1SvImJ_T0048820.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 93702636 93908613 - Nrxn1 protein_coding processed_transcript MGP_129S1SvImJ_T0048821.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 93750751 94701309 - Nrxn1 protein_coding retained_intron MGP_129S1SvImJ_T0048822.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 93750751 94018448 - Nrxn1 protein_coding retained_intron MGP_129S1SvImJ_T0048823.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 93923290 94154779 - MGP_129S1SvImJ_P0048823 Nrxn1 protein_coding protein_coding MGP_129S1SvImJ_T0048824.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 93923531 94154928 - MGP_129S1SvImJ_P0048824 Nrxn1 protein_coding protein_coding MGP_129S1SvImJ_T0048825.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 94017412 94020195 - Nrxn1 protein_coding retained_intron MGP_129S1SvImJ_T0048826.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 94102132 94696678 - Nrxn1 protein_coding processed_transcript MGP_129S1SvImJ_T0048827.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 94114303 94277712 - MGP_129S1SvImJ_P0048827 Nrxn1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048828.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 94156017 94197587 - MGP_129S1SvImJ_P0048828 Nrxn1 protein_coding protein_coding MGP_129S1SvImJ_T0048829.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 94156295 94273812 - MGP_129S1SvImJ_P0048829 Nrxn1 protein_coding protein_coding MGP_129S1SvImJ_T0048830.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 94187179 94197390 - Nrxn1 protein_coding retained_intron MGP_129S1SvImJ_T0048831.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 94272968 94701277 - Nrxn1 protein_coding retained_intron MGP_129S1SvImJ_T0048832.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 94276214 94701297 - Nrxn1 protein_coding retained_intron MGP_129S1SvImJ_T0048833.1 MGP_129S1SvImJ_G0024115.1 mouse_genomes_project 17 94693652 94701259 - Nrxn1 protein_coding retained_intron MGP_129S1SvImJ_T0099543.1 MGP_129S1SvImJ_G0037610.1 mouse_genomes_project 17 4646721 4646934 - Gm23050 snRNA snRNA MGP_129S1SvImJ_T0046308.1 MGP_129S1SvImJ_G0023385.1 mouse_genomes_project 17 25067623 25081083 + MGP_129S1SvImJ_P0046308 D630044L22Rik protein_coding protein_coding MGP_129S1SvImJ_T0045625.1 MGP_129S1SvImJ_G0023170.1 mouse_genomes_project 17 12846162 12861948 - MGP_129S1SvImJ_P0045625 protein_coding protein_coding MGP_129S1SvImJ_T0045626.1 MGP_129S1SvImJ_G0023170.1 mouse_genomes_project 17 12846162 12861948 - MGP_129S1SvImJ_P0045626 protein_coding protein_coding MGP_129S1SvImJ_T0045410.1 MGP_129S1SvImJ_G0023104.1 mouse_genomes_project 17 2511539 2544860 - MGP_129S1SvImJ_P0045410 Tmem242 protein_coding protein_coding MGP_129S1SvImJ_T0045412.1 MGP_129S1SvImJ_G0023104.1 mouse_genomes_project 17 2535479 2544876 - MGP_129S1SvImJ_P0045412 Tmem242 protein_coding protein_coding MGP_129S1SvImJ_T0045413.1 MGP_129S1SvImJ_G0023104.1 mouse_genomes_project 17 2536209 2544873 - MGP_129S1SvImJ_P0045413 Tmem242 protein_coding protein_coding MGP_129S1SvImJ_T0010210.1 MGP_129S1SvImJ_G0008326.1 mouse_genomes_project 17 26635742 26635804 + Mir7217 miRNA miRNA MGP_129S1SvImJ_T0099558.1 MGP_129S1SvImJ_G0037625.1 mouse_genomes_project 17 35185564 35185668 + Gm23421 snRNA snRNA MGP_129S1SvImJ_T0048634.1 MGP_129S1SvImJ_G0024048.1 mouse_genomes_project 17 81791099 81865690 - MGP_129S1SvImJ_P0048634 Prkd3 protein_coding protein_coding MGP_129S1SvImJ_T0048635.1 MGP_129S1SvImJ_G0024048.1 mouse_genomes_project 17 81791099 81858089 - MGP_129S1SvImJ_P0048635 Prkd3 protein_coding protein_coding MGP_129S1SvImJ_T0048636.1 MGP_129S1SvImJ_G0024048.1 mouse_genomes_project 17 81792237 81865690 - MGP_129S1SvImJ_P0048636 Prkd3 protein_coding protein_coding MGP_129S1SvImJ_T0048637.1 MGP_129S1SvImJ_G0024048.1 mouse_genomes_project 17 81793329 81853599 - MGP_129S1SvImJ_P0048637 Prkd3 protein_coding protein_coding MGP_129S1SvImJ_T0048638.1 MGP_129S1SvImJ_G0024048.1 mouse_genomes_project 17 81811329 81827105 - Prkd3 protein_coding retained_intron MGP_129S1SvImJ_T0048639.1 MGP_129S1SvImJ_G0024048.1 mouse_genomes_project 17 81813512 81865613 - MGP_129S1SvImJ_P0048639 Prkd3 protein_coding protein_coding MGP_129S1SvImJ_T0048640.1 MGP_129S1SvImJ_G0024048.1 mouse_genomes_project 17 81813981 81853782 - Prkd3 protein_coding processed_transcript MGP_129S1SvImJ_T0048641.1 MGP_129S1SvImJ_G0024048.1 mouse_genomes_project 17 81854903 81865651 - Prkd3 protein_coding retained_intron MGP_129S1SvImJ_T0048367.1 MGP_129S1SvImJ_G0023965.1 mouse_genomes_project 17 59484386 59484839 - MGP_129S1SvImJ_P0048367 Gm21834 protein_coding protein_coding MGP_129S1SvImJ_T0102292.1 MGP_129S1SvImJ_G0040126.1 mouse_genomes_project 17 19020994 19031215 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0047086.1 MGP_129S1SvImJ_G0023565.1 mouse_genomes_project 17 34213624 34216772 - MGP_129S1SvImJ_P0047086 Gm15821 protein_coding protein_coding MGP_129S1SvImJ_T0047605.1 MGP_129S1SvImJ_G0023681.1 mouse_genomes_project 17 37159125 37162523 + MGP_129S1SvImJ_P0047605 H2-M10.6 protein_coding protein_coding MGP_129S1SvImJ_T0048674.1 MGP_129S1SvImJ_G0024068.1 mouse_genomes_project 17 84002020 84041644 - MGP_129S1SvImJ_P0048674 Thumpd2 protein_coding protein_coding MGP_129S1SvImJ_T0048262.1 MGP_129S1SvImJ_G0023924.1 mouse_genomes_project 17 57987756 58006428 + MGP_129S1SvImJ_P0048262 Uhrf1 protein_coding protein_coding MGP_129S1SvImJ_T0048263.1 MGP_129S1SvImJ_G0023924.1 mouse_genomes_project 17 57988435 57994746 + MGP_129S1SvImJ_P0048263 Uhrf1 protein_coding protein_coding MGP_129S1SvImJ_T0048264.1 MGP_129S1SvImJ_G0023924.1 mouse_genomes_project 17 57996673 57997187 + Uhrf1 protein_coding retained_intron MGP_129S1SvImJ_T0048265.1 MGP_129S1SvImJ_G0023924.1 mouse_genomes_project 17 58002036 58006265 + Uhrf1 protein_coding retained_intron MGP_129S1SvImJ_T0100818.1 MGP_129S1SvImJ_G0038885.1 mouse_genomes_project 17 22974920 22975049 - Gm25092 snoRNA snoRNA MGP_129S1SvImJ_T0048519.1 MGP_129S1SvImJ_G0024007.1 mouse_genomes_project 17 73785397 73799446 - Smchd1 protein_coding processed_transcript MGP_129S1SvImJ_T0048520.1 MGP_129S1SvImJ_G0024007.1 mouse_genomes_project 17 73785397 73929541 - MGP_129S1SvImJ_P0048520 Smchd1 protein_coding protein_coding MGP_129S1SvImJ_T0048521.1 MGP_129S1SvImJ_G0024007.1 mouse_genomes_project 17 73787418 73789915 - Smchd1 protein_coding retained_intron MGP_129S1SvImJ_T0048522.1 MGP_129S1SvImJ_G0024007.1 mouse_genomes_project 17 73789828 73804809 - Smchd1 protein_coding retained_intron MGP_129S1SvImJ_T0048523.1 MGP_129S1SvImJ_G0024007.1 mouse_genomes_project 17 73791785 73794295 - Smchd1 protein_coding retained_intron MGP_129S1SvImJ_T0048524.1 MGP_129S1SvImJ_G0024007.1 mouse_genomes_project 17 73800035 73804136 - Smchd1 protein_coding retained_intron MGP_129S1SvImJ_T0048525.1 MGP_129S1SvImJ_G0024007.1 mouse_genomes_project 17 73836868 73838115 - Smchd1 protein_coding retained_intron MGP_129S1SvImJ_T0048526.1 MGP_129S1SvImJ_G0024007.1 mouse_genomes_project 17 73840477 73841297 - Smchd1 protein_coding retained_intron MGP_129S1SvImJ_T0048530.1 MGP_129S1SvImJ_G0024007.1 mouse_genomes_project 17 73926760 73929526 - Smchd1 protein_coding retained_intron MGP_129S1SvImJ_T0048349.1 MGP_129S1SvImJ_G0023956.1 mouse_genomes_project 17 58865488 58867851 + MGP_129S1SvImJ_P0048349 Tnfsf9 protein_coding protein_coding MGP_129S1SvImJ_T0006995.1 MGP_129S1SvImJ_G0005756.1 mouse_genomes_project 17 86127191 86128916 + Gm29052 lincRNA lincRNA MGP_129S1SvImJ_T0045776.1 MGP_129S1SvImJ_G0023248.1 mouse_genomes_project 17 21560397 21560568 + MGP_129S1SvImJ_P0045776 Gm9805 protein_coding protein_coding MGP_129S1SvImJ_T0006920.1 MGP_129S1SvImJ_G0005702.1 mouse_genomes_project 17 24890948 25082257 + lincRNA lincRNA MGP_129S1SvImJ_T0003810.1 MGP_129S1SvImJ_G0003426.1 mouse_genomes_project 17 90714519 90716801 - Gm15978 antisense antisense MGP_129S1SvImJ_T0045807.1 MGP_129S1SvImJ_G0023260.1 mouse_genomes_project 17 22574610 22582515 + MGP_129S1SvImJ_P0045807 Ccdc64b protein_coding protein_coding MGP_129S1SvImJ_T0047438.1 MGP_129S1SvImJ_G0023647.1 mouse_genomes_project 17 35798956 35808348 - protein_coding processed_transcript MGP_129S1SvImJ_T0100828.1 MGP_129S1SvImJ_G0038895.1 mouse_genomes_project 17 35398642 35398718 + Gm25128 snoRNA snoRNA MGP_129S1SvImJ_T0017621.1 MGP_129S1SvImJ_G0015355.1 mouse_genomes_project 17 74017945 74062325 - Trmt61b processed_transcript processed_transcript MGP_129S1SvImJ_T0017622.1 MGP_129S1SvImJ_G0015355.1 mouse_genomes_project 17 74017980 74062316 - Trmt61b processed_transcript processed_transcript MGP_129S1SvImJ_T0017623.1 MGP_129S1SvImJ_G0015355.1 mouse_genomes_project 17 74051180 74061823 - Trmt61b processed_transcript processed_transcript MGP_129S1SvImJ_T0047682.1 MGP_129S1SvImJ_G0023704.1 mouse_genomes_project 17 37608010 37608737 - MGP_129S1SvImJ_P0047682 protein_coding protein_coding MGP_129S1SvImJ_T0013245.1 MGP_129S1SvImJ_G0011334.1 mouse_genomes_project 17 24384459 24385329 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099542.1 MGP_129S1SvImJ_G0037609.1 mouse_genomes_project 17 1734221 1734328 + Gm23186 snRNA snRNA MGP_129S1SvImJ_T0003749.1 MGP_129S1SvImJ_G0003379.1 mouse_genomes_project 17 25809184 25813917 - Gm17218 antisense antisense MGP_129S1SvImJ_T0047817.1 MGP_129S1SvImJ_G0023790.1 mouse_genomes_project 17 46559447 46567074 - MGP_129S1SvImJ_P0047817 Tmem151b protein_coding protein_coding MGP_129S1SvImJ_T0101871.1 MGP_129S1SvImJ_G0039805.1 mouse_genomes_project 17 34491660 34578000 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101872.1 MGP_129S1SvImJ_G0039805.1 mouse_genomes_project 17 34503775 34512640 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101873.1 MGP_129S1SvImJ_G0039805.1 mouse_genomes_project 17 34509113 34510848 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0013311.1 MGP_129S1SvImJ_G0011400.1 mouse_genomes_project 17 81888084 81889061 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048414.1 MGP_129S1SvImJ_G0023982.1 mouse_genomes_project 17 68086164 68114856 - MGP_129S1SvImJ_P0048414 Twsg1 protein_coding protein_coding MGP_129S1SvImJ_T0046717.1 MGP_129S1SvImJ_G0023485.1 mouse_genomes_project 17 30946536 30983436 + MGP_129S1SvImJ_P0046717 Ubash3a protein_coding protein_coding MGP_129S1SvImJ_T0046718.1 MGP_129S1SvImJ_G0023485.1 mouse_genomes_project 17 30946743 30956103 + MGP_129S1SvImJ_P0046718 Ubash3a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046719.1 MGP_129S1SvImJ_G0023485.1 mouse_genomes_project 17 30946752 30953816 + MGP_129S1SvImJ_P0046719 Ubash3a protein_coding protein_coding MGP_129S1SvImJ_T0046720.1 MGP_129S1SvImJ_G0023485.1 mouse_genomes_project 17 30950596 30983436 + Ubash3a protein_coding processed_transcript MGP_129S1SvImJ_T0046721.1 MGP_129S1SvImJ_G0023485.1 mouse_genomes_project 17 30950780 30957854 + Ubash3a protein_coding processed_transcript MGP_129S1SvImJ_T0046827.1 MGP_129S1SvImJ_G0023507.1 mouse_genomes_project 17 32349655 32377075 + MGP_129S1SvImJ_P0046827 Cyp4f17 protein_coding protein_coding MGP_129S1SvImJ_T0046828.1 MGP_129S1SvImJ_G0023507.1 mouse_genomes_project 17 32365392 32377868 + MGP_129S1SvImJ_P0046828 Cyp4f17 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0010221.1 MGP_129S1SvImJ_G0008337.1 mouse_genomes_project 17 34956917 34956984 - Mir6970 miRNA miRNA MGP_129S1SvImJ_T0046874.1 MGP_129S1SvImJ_G0023527.1 mouse_genomes_project 17 33279478 33307486 - Zfp101 protein_coding processed_transcript MGP_129S1SvImJ_T0046875.1 MGP_129S1SvImJ_G0023527.1 mouse_genomes_project 17 33291853 33307749 - MGP_129S1SvImJ_P0046875 Zfp101 protein_coding protein_coding MGP_129S1SvImJ_T0046876.1 MGP_129S1SvImJ_G0023527.1 mouse_genomes_project 17 33293953 33307465 - MGP_129S1SvImJ_P0046876 Zfp101 protein_coding protein_coding MGP_129S1SvImJ_T0046877.1 MGP_129S1SvImJ_G0023527.1 mouse_genomes_project 17 33294663 33307731 - MGP_129S1SvImJ_P0046877 Zfp101 protein_coding protein_coding MGP_129S1SvImJ_T0046878.1 MGP_129S1SvImJ_G0023527.1 mouse_genomes_project 17 33297878 33307713 - Zfp101 protein_coding processed_transcript MGP_129S1SvImJ_T0048272.1 MGP_129S1SvImJ_G0023926.1 mouse_genomes_project 17 58106919 58156233 - MGP_129S1SvImJ_P0048272 Ptprs protein_coding protein_coding MGP_129S1SvImJ_T0048273.1 MGP_129S1SvImJ_G0023926.1 mouse_genomes_project 17 58106921 58174240 - MGP_129S1SvImJ_P0048273 Ptprs protein_coding protein_coding MGP_129S1SvImJ_T0048274.1 MGP_129S1SvImJ_G0023926.1 mouse_genomes_project 17 58116724 58174126 - Ptprs protein_coding processed_transcript MGP_129S1SvImJ_T0048275.1 MGP_129S1SvImJ_G0023926.1 mouse_genomes_project 17 58119554 58174202 - MGP_129S1SvImJ_P0048275 Ptprs protein_coding unknown_likely_coding MGP_129S1SvImJ_T0045927.1 MGP_129S1SvImJ_G0023296.1 mouse_genomes_project 17 23331958 23378785 + Abca3 protein_coding retained_intron MGP_129S1SvImJ_T0045928.1 MGP_129S1SvImJ_G0023296.1 mouse_genomes_project 17 23332031 23391041 + MGP_129S1SvImJ_P0045928 Abca3 protein_coding protein_coding MGP_129S1SvImJ_T0045929.1 MGP_129S1SvImJ_G0023296.1 mouse_genomes_project 17 23332054 23391041 + MGP_129S1SvImJ_P0045929 Abca3 protein_coding protein_coding MGP_129S1SvImJ_T0045930.1 MGP_129S1SvImJ_G0023296.1 mouse_genomes_project 17 23332099 23381965 + Abca3 protein_coding retained_intron MGP_129S1SvImJ_T0045931.1 MGP_129S1SvImJ_G0023296.1 mouse_genomes_project 17 23332099 23357104 + Abca3 protein_coding retained_intron MGP_129S1SvImJ_T0045932.1 MGP_129S1SvImJ_G0023296.1 mouse_genomes_project 17 23332111 23340931 + Abca3 protein_coding processed_transcript MGP_129S1SvImJ_T0045933.1 MGP_129S1SvImJ_G0023296.1 mouse_genomes_project 17 23332116 23364247 + Abca3 protein_coding retained_intron MGP_129S1SvImJ_T0045934.1 MGP_129S1SvImJ_G0023296.1 mouse_genomes_project 17 23344418 23391041 + MGP_129S1SvImJ_P0045934 Abca3 protein_coding protein_coding MGP_129S1SvImJ_T0099553.1 MGP_129S1SvImJ_G0037620.1 mouse_genomes_project 17 30463932 30464036 - Gm24661 snRNA snRNA MGP_129S1SvImJ_T0046847.1 MGP_129S1SvImJ_G0023514.1 mouse_genomes_project 17 32769656 32782496 - MGP_129S1SvImJ_P0046847 Zfp870 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0047770.1 MGP_129S1SvImJ_G0023774.1 mouse_genomes_project 17 44358079 44389283 - MGP_129S1SvImJ_P0047770 Mep1a protein_coding protein_coding MGP_129S1SvImJ_T0047771.1 MGP_129S1SvImJ_G0023774.1 mouse_genomes_project 17 44384425 44387008 - Mep1a protein_coding processed_transcript MGP_129S1SvImJ_T0047772.1 MGP_129S1SvImJ_G0023774.1 mouse_genomes_project 17 44388769 44389259 - Mep1a protein_coding retained_intron MGP_129S1SvImJ_T0047399.1 MGP_129S1SvImJ_G0023633.1 mouse_genomes_project 17 35393213 35406759 + MGP_129S1SvImJ_P0047399 Ddx39b protein_coding protein_coding MGP_129S1SvImJ_T0047400.1 MGP_129S1SvImJ_G0023633.1 mouse_genomes_project 17 35393215 35402438 + MGP_129S1SvImJ_P0047400 Ddx39b protein_coding protein_coding MGP_129S1SvImJ_T0047401.1 MGP_129S1SvImJ_G0023633.1 mouse_genomes_project 17 35393272 35402999 + Ddx39b protein_coding retained_intron MGP_129S1SvImJ_T0047402.1 MGP_129S1SvImJ_G0023633.1 mouse_genomes_project 17 35393337 35406732 + MGP_129S1SvImJ_P0047402 Ddx39b protein_coding protein_coding MGP_129S1SvImJ_T0047403.1 MGP_129S1SvImJ_G0023633.1 mouse_genomes_project 17 35393463 35394692 + Ddx39b protein_coding processed_transcript MGP_129S1SvImJ_T0047404.1 MGP_129S1SvImJ_G0023633.1 mouse_genomes_project 17 35394134 35406728 + MGP_129S1SvImJ_P0047404 Ddx39b protein_coding protein_coding MGP_129S1SvImJ_T0046790.1 MGP_129S1SvImJ_G0023500.1 mouse_genomes_project 17 32025873 32035276 - MGP_129S1SvImJ_P0046790 Brd4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0046791.1 MGP_129S1SvImJ_G0023500.1 mouse_genomes_project 17 32026967 32119800 - MGP_129S1SvImJ_P0046791 Brd4 protein_coding protein_coding MGP_129S1SvImJ_T0046792.1 MGP_129S1SvImJ_G0023500.1 mouse_genomes_project 17 32026967 32119788 - MGP_129S1SvImJ_P0046792 Brd4 protein_coding protein_coding MGP_129S1SvImJ_T0046793.1 MGP_129S1SvImJ_G0023500.1 mouse_genomes_project 17 32026969 32119788 - MGP_129S1SvImJ_P0046793 Brd4 protein_coding protein_coding MGP_129S1SvImJ_T0046794.1 MGP_129S1SvImJ_G0023500.1 mouse_genomes_project 17 32035573 32119800 - MGP_129S1SvImJ_P0046794 Brd4 protein_coding protein_coding MGP_129S1SvImJ_T0046795.1 MGP_129S1SvImJ_G0023500.1 mouse_genomes_project 17 32037453 32119814 - MGP_129S1SvImJ_P0046795 Brd4 protein_coding protein_coding MGP_129S1SvImJ_T0046796.1 MGP_129S1SvImJ_G0023500.1 mouse_genomes_project 17 32043958 32120413 - MGP_129S1SvImJ_P0046796 Brd4 protein_coding protein_coding MGP_129S1SvImJ_T0046797.1 MGP_129S1SvImJ_G0023500.1 mouse_genomes_project 17 32043993 32120368 - MGP_129S1SvImJ_P0046797 Brd4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0013228.1 MGP_129S1SvImJ_G0011317.1 mouse_genomes_project 17 2987082 2987384 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0046205.1 MGP_129S1SvImJ_G0023365.1 mouse_genomes_project 17 24868576 24879425 + MGP_129S1SvImJ_P0046205 Narfl protein_coding protein_coding MGP_129S1SvImJ_T0046206.1 MGP_129S1SvImJ_G0023365.1 mouse_genomes_project 17 24868576 24878884 + MGP_129S1SvImJ_P0046206 Narfl protein_coding protein_coding MGP_129S1SvImJ_T0046207.1 MGP_129S1SvImJ_G0023365.1 mouse_genomes_project 17 24868607 24870026 + Narfl protein_coding retained_intron MGP_129S1SvImJ_T0046208.1 MGP_129S1SvImJ_G0023365.1 mouse_genomes_project 17 24868617 24875606 + MGP_129S1SvImJ_P0046208 Narfl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046209.1 MGP_129S1SvImJ_G0023365.1 mouse_genomes_project 17 24868619 24878889 + Narfl protein_coding retained_intron MGP_129S1SvImJ_T0046210.1 MGP_129S1SvImJ_G0023365.1 mouse_genomes_project 17 24872911 24875686 + Narfl protein_coding retained_intron MGP_129S1SvImJ_T0046573.1 MGP_129S1SvImJ_G0023448.1 mouse_genomes_project 17 28136811 28199732 + MGP_129S1SvImJ_P0046573 Mapk14 protein_coding protein_coding MGP_129S1SvImJ_T0046574.1 MGP_129S1SvImJ_G0023448.1 mouse_genomes_project 17 28136811 28192492 + MGP_129S1SvImJ_P0046574 Mapk14 protein_coding protein_coding MGP_129S1SvImJ_T0046575.1 MGP_129S1SvImJ_G0023448.1 mouse_genomes_project 17 28136811 28199732 + MGP_129S1SvImJ_P0046575 Mapk14 protein_coding protein_coding MGP_129S1SvImJ_T0046576.1 MGP_129S1SvImJ_G0023448.1 mouse_genomes_project 17 28136909 28178553 + MGP_129S1SvImJ_P0046576 Mapk14 protein_coding protein_coding MGP_129S1SvImJ_T0046577.1 MGP_129S1SvImJ_G0023448.1 mouse_genomes_project 17 28137209 28199737 + MGP_129S1SvImJ_P0046577 Mapk14 protein_coding protein_coding MGP_129S1SvImJ_T0046578.1 MGP_129S1SvImJ_G0023448.1 mouse_genomes_project 17 28192946 28197685 + Mapk14 protein_coding retained_intron MGP_129S1SvImJ_T0045731.1 MGP_129S1SvImJ_G0023224.1 mouse_genomes_project 17 19998219 20000683 + MGP_129S1SvImJ_P0045731 Vmn1r235 protein_coding protein_coding MGP_129S1SvImJ_T0047867.1 MGP_129S1SvImJ_G0023798.1 mouse_genomes_project 17 46712774 46724651 + MGP_129S1SvImJ_P0047867 Mrpl14 protein_coding protein_coding MGP_129S1SvImJ_T0047868.1 MGP_129S1SvImJ_G0023798.1 mouse_genomes_project 17 46712809 46724334 + Mrpl14 protein_coding processed_transcript MGP_129S1SvImJ_T0047869.1 MGP_129S1SvImJ_G0023798.1 mouse_genomes_project 17 46721576 46724556 + Mrpl14 protein_coding processed_transcript MGP_129S1SvImJ_T0047773.1 MGP_129S1SvImJ_G0023775.1 mouse_genomes_project 17 44424281 44435124 - MGP_129S1SvImJ_P0047773 Ankrd66 protein_coding protein_coding MGP_129S1SvImJ_T0045720.1 MGP_129S1SvImJ_G0023219.1 mouse_genomes_project 17 19653528 19674096 + MGP_129S1SvImJ_P0045720 Ppp2r1a protein_coding protein_coding MGP_129S1SvImJ_T0045721.1 MGP_129S1SvImJ_G0023219.1 mouse_genomes_project 17 19653704 19666960 + MGP_129S1SvImJ_P0045721 Ppp2r1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045722.1 MGP_129S1SvImJ_G0023219.1 mouse_genomes_project 17 19664759 19667013 + Ppp2r1a protein_coding retained_intron MGP_129S1SvImJ_T0045723.1 MGP_129S1SvImJ_G0023219.1 mouse_genomes_project 17 19664960 19667685 + MGP_129S1SvImJ_P0045723 Ppp2r1a protein_coding protein_coding MGP_129S1SvImJ_T0045724.1 MGP_129S1SvImJ_G0023219.1 mouse_genomes_project 17 19666916 19668774 + Ppp2r1a protein_coding retained_intron MGP_129S1SvImJ_T0045725.1 MGP_129S1SvImJ_G0023219.1 mouse_genomes_project 17 19667164 19670118 + Ppp2r1a protein_coding retained_intron MGP_129S1SvImJ_T0045726.1 MGP_129S1SvImJ_G0023219.1 mouse_genomes_project 17 19668665 19669442 + Ppp2r1a protein_coding retained_intron MGP_129S1SvImJ_T0013312.1 MGP_129S1SvImJ_G0011401.1 mouse_genomes_project 17 83903485 83903866 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013275.1 MGP_129S1SvImJ_G0011364.1 mouse_genomes_project 17 38597163 38598025 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0047238.1 MGP_129S1SvImJ_G0023596.1 mouse_genomes_project 17 34994396 35013167 + MGP_129S1SvImJ_P0047238 Zbtb12 protein_coding protein_coding MGP_129S1SvImJ_T0047241.1 MGP_129S1SvImJ_G0023596.1 mouse_genomes_project 17 35010928 35014589 + MGP_129S1SvImJ_P0047241 Zbtb12 protein_coding protein_coding MGP_129S1SvImJ_T0048002.1 MGP_129S1SvImJ_G0023837.1 mouse_genomes_project 17 48001016 48002859 + MGP_129S1SvImJ_P0048002 Tbcc protein_coding protein_coding MGP_129S1SvImJ_T0047711.1 MGP_129S1SvImJ_G0023729.1 mouse_genomes_project 17 38301663 38302785 + MGP_129S1SvImJ_P0047711 Olfr124 protein_coding protein_coding MGP_129S1SvImJ_T0011445.1 MGP_129S1SvImJ_G0009561.1 mouse_genomes_project 17 36594843 36595161 - Gm22453 misc_RNA misc_RNA MGP_129S1SvImJ_T0045467.1 MGP_129S1SvImJ_G0023123.1 mouse_genomes_project 17 5197248 5230854 + MGP_129S1SvImJ_P0045467 protein_coding protein_coding MGP_129S1SvImJ_T0045468.1 MGP_129S1SvImJ_G0023123.1 mouse_genomes_project 17 5204540 5230676 + MGP_129S1SvImJ_P0045468 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0046227.1 MGP_129S1SvImJ_G0023370.1 mouse_genomes_project 17 24906434 24918574 + MGP_129S1SvImJ_P0046227 Fbxl16 protein_coding protein_coding MGP_129S1SvImJ_T0013253.1 MGP_129S1SvImJ_G0011342.1 mouse_genomes_project 17 34402990 34403278 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0045612.1 MGP_129S1SvImJ_G0023166.1 mouse_genomes_project 17 12661457 12763886 - MGP_129S1SvImJ_P0045612 Wdr27 protein_coding protein_coding MGP_129S1SvImJ_T0045613.1 MGP_129S1SvImJ_G0023166.1 mouse_genomes_project 17 12705356 12763886 - MGP_129S1SvImJ_P0045613 Wdr27 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0006931.1 MGP_129S1SvImJ_G0005712.1 mouse_genomes_project 17 28517101 28518211 + Gm16195 lincRNA lincRNA MGP_129S1SvImJ_T0100837.1 MGP_129S1SvImJ_G0038904.1 mouse_genomes_project 17 74106677 74106755 + Snord53 snoRNA snoRNA MGP_129S1SvImJ_T0047573.1 MGP_129S1SvImJ_G0023667.1 mouse_genomes_project 17 36253845 36257786 - H2-T23 protein_coding retained_intron MGP_129S1SvImJ_T0047574.1 MGP_129S1SvImJ_G0023667.1 mouse_genomes_project 17 36254048 36258100 - MGP_129S1SvImJ_P0047574 H2-T23 protein_coding protein_coding MGP_129S1SvImJ_T0047575.1 MGP_129S1SvImJ_G0023667.1 mouse_genomes_project 17 36254104 36257935 - H2-T23 protein_coding retained_intron MGP_129S1SvImJ_T0047576.1 MGP_129S1SvImJ_G0023667.1 mouse_genomes_project 17 36257007 36257975 - H2-T23 protein_coding retained_intron MGP_129S1SvImJ_T0048687.1 MGP_129S1SvImJ_G0024073.1 mouse_genomes_project 17 86582475 86594829 - MGP_129S1SvImJ_P0048687 Cox7a2l protein_coding protein_coding MGP_129S1SvImJ_T0048688.1 MGP_129S1SvImJ_G0024073.1 mouse_genomes_project 17 86582475 86594829 - MGP_129S1SvImJ_P0048688 Cox7a2l protein_coding protein_coding MGP_129S1SvImJ_T0047011.1 MGP_129S1SvImJ_G0023551.1 mouse_genomes_project 17 33990230 33994119 - MGP_129S1SvImJ_P0047011 Ring1 protein_coding protein_coding MGP_129S1SvImJ_T0047012.1 MGP_129S1SvImJ_G0023551.1 mouse_genomes_project 17 33990522 33993371 - Ring1 protein_coding retained_intron MGP_129S1SvImJ_T0047013.1 MGP_129S1SvImJ_G0023551.1 mouse_genomes_project 17 33993629 33994091 - Ring1 protein_coding retained_intron MGP_129S1SvImJ_T0001015.1 MGP_129S1SvImJ_G0000944.1 mouse_genomes_project 17 53314380 53316248 + TEC TEC MGP_129S1SvImJ_T0011452.1 MGP_129S1SvImJ_G0009568.1 mouse_genomes_project 17 63172394 63172690 + Gm23773 misc_RNA misc_RNA MGP_129S1SvImJ_T0102318.1 MGP_129S1SvImJ_G0040152.1 mouse_genomes_project 17 34401948 34411219 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102356.1 MGP_129S1SvImJ_G0040190.1 mouse_genomes_project 17 37664424 37665352 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0047925.1 MGP_129S1SvImJ_G0023809.1 mouse_genomes_project 17 47300526 47303634 + MGP_129S1SvImJ_P0047925 Lrrc73 protein_coding protein_coding MGP_129S1SvImJ_T0048376.1 MGP_129S1SvImJ_G0023969.1 mouse_genomes_project 17 64633404 64923683 - MGP_129S1SvImJ_P0048376 Efna5 protein_coding protein_coding MGP_129S1SvImJ_T0048377.1 MGP_129S1SvImJ_G0023969.1 mouse_genomes_project 17 64636540 64923510 - MGP_129S1SvImJ_P0048377 Efna5 protein_coding protein_coding MGP_129S1SvImJ_T0013289.1 MGP_129S1SvImJ_G0011378.1 mouse_genomes_project 17 55475805 55476137 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048390.1 MGP_129S1SvImJ_G0023974.1 mouse_genomes_project 17 66689490 66850698 + MGP_129S1SvImJ_P0048390 Man2a1 protein_coding protein_coding MGP_129S1SvImJ_T0048391.1 MGP_129S1SvImJ_G0023974.1 mouse_genomes_project 17 66809130 66810513 + Man2a1 protein_coding retained_intron MGP_129S1SvImJ_T0048392.1 MGP_129S1SvImJ_G0023974.1 mouse_genomes_project 17 66809329 66850426 + MGP_129S1SvImJ_P0048392 Man2a1 protein_coding protein_coding MGP_129S1SvImJ_T0100816.1 MGP_129S1SvImJ_G0038883.1 mouse_genomes_project 17 10590600 10590738 + Gm26130 snoRNA snoRNA MGP_129S1SvImJ_T0048225.1 MGP_129S1SvImJ_G0023906.1 mouse_genomes_project 17 57617877 57626640 - MGP_129S1SvImJ_P0048225 Stap2 protein_coding protein_coding MGP_129S1SvImJ_T0048259.1 MGP_129S1SvImJ_G0023921.1 mouse_genomes_project 17 57942380 57955527 - MGP_129S1SvImJ_P0048259 Ticam1 protein_coding protein_coding MGP_129S1SvImJ_T0048146.1 MGP_129S1SvImJ_G0023875.1 mouse_genomes_project 17 49749154 49762926 + MGP_129S1SvImJ_P0048146 Unc5cl protein_coding protein_coding MGP_129S1SvImJ_T0048147.1 MGP_129S1SvImJ_G0023875.1 mouse_genomes_project 17 49756596 49762920 + MGP_129S1SvImJ_P0048147 Unc5cl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048148.1 MGP_129S1SvImJ_G0023875.1 mouse_genomes_project 17 49756621 49848806 + MGP_129S1SvImJ_P0048148 Unc5cl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048149.1 MGP_129S1SvImJ_G0023875.1 mouse_genomes_project 17 49756627 49759279 + MGP_129S1SvImJ_P0048149 Unc5cl protein_coding protein_coding MGP_129S1SvImJ_T0048150.1 MGP_129S1SvImJ_G0023875.1 mouse_genomes_project 17 49756645 49762918 + MGP_129S1SvImJ_P0048150 Unc5cl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048151.1 MGP_129S1SvImJ_G0023875.1 mouse_genomes_project 17 49756665 49848699 + MGP_129S1SvImJ_P0048151 Unc5cl protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047626.1 MGP_129S1SvImJ_G0023687.1 mouse_genomes_project 17 37298905 37303968 + MGP_129S1SvImJ_P0047626 Rnf39 protein_coding protein_coding MGP_129S1SvImJ_T0047627.1 MGP_129S1SvImJ_G0023687.1 mouse_genomes_project 17 37299042 37301595 + MGP_129S1SvImJ_P0047627 Rnf39 protein_coding protein_coding MGP_129S1SvImJ_T0047628.1 MGP_129S1SvImJ_G0023687.1 mouse_genomes_project 17 37301057 37303268 + MGP_129S1SvImJ_P0047628 Rnf39 protein_coding protein_coding MGP_129S1SvImJ_T0046701.1 MGP_129S1SvImJ_G0023476.1 mouse_genomes_project 17 30229222 30251812 - MGP_129S1SvImJ_P0046701 Glo1 protein_coding protein_coding MGP_129S1SvImJ_T0046702.1 MGP_129S1SvImJ_G0023476.1 mouse_genomes_project 17 30229222 30251812 - MGP_129S1SvImJ_P0046702 Glo1 protein_coding protein_coding MGP_129S1SvImJ_T0046666.1 MGP_129S1SvImJ_G0023469.1 mouse_genomes_project 17 29160106 29187364 + MGP_129S1SvImJ_P0046666 Rnf8 protein_coding protein_coding MGP_129S1SvImJ_T0046667.1 MGP_129S1SvImJ_G0023469.1 mouse_genomes_project 17 29160138 29172408 + MGP_129S1SvImJ_P0046667 Rnf8 protein_coding protein_coding MGP_129S1SvImJ_T0046668.1 MGP_129S1SvImJ_G0023469.1 mouse_genomes_project 17 29160170 29187287 + MGP_129S1SvImJ_P0046668 Rnf8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046670.1 MGP_129S1SvImJ_G0023469.1 mouse_genomes_project 17 29160206 29164876 + Rnf8 protein_coding processed_transcript MGP_129S1SvImJ_T0046671.1 MGP_129S1SvImJ_G0023469.1 mouse_genomes_project 17 29161453 29172441 + MGP_129S1SvImJ_P0046671 Rnf8 protein_coding protein_coding MGP_129S1SvImJ_T0046672.1 MGP_129S1SvImJ_G0023469.1 mouse_genomes_project 17 29174003 29181549 + Rnf8 protein_coding retained_intron MGP_129S1SvImJ_T0046673.1 MGP_129S1SvImJ_G0023469.1 mouse_genomes_project 17 29176905 29187235 + Rnf8 protein_coding retained_intron MGP_129S1SvImJ_T0046674.1 MGP_129S1SvImJ_G0023469.1 mouse_genomes_project 17 29180118 29187256 + Rnf8 protein_coding retained_intron MGP_129S1SvImJ_T0047571.1 MGP_129S1SvImJ_G0023666.1 mouse_genomes_project 17 36235002 36244242 - MGP_129S1SvImJ_P0047571 H2-T24 protein_coding protein_coding MGP_129S1SvImJ_T0047572.1 MGP_129S1SvImJ_G0023666.1 mouse_genomes_project 17 36235576 36244207 - MGP_129S1SvImJ_P0047572 H2-T24 protein_coding protein_coding MGP_129S1SvImJ_T0048597.1 MGP_129S1SvImJ_G0024032.1 mouse_genomes_project 17 77395695 77548829 + MGP_129S1SvImJ_P0048597 Ttc27 protein_coding protein_coding MGP_129S1SvImJ_T0045527.1 MGP_129S1SvImJ_G0023142.1 mouse_genomes_project 17 8446191 9170375 + Park2 protein_coding retained_intron MGP_129S1SvImJ_T0045528.1 MGP_129S1SvImJ_G0023142.1 mouse_genomes_project 17 8446191 9170375 + Park2 protein_coding retained_intron MGP_129S1SvImJ_T0045529.1 MGP_129S1SvImJ_G0023142.1 mouse_genomes_project 17 8446191 9692979 + MGP_129S1SvImJ_P0045529 Park2 protein_coding protein_coding MGP_129S1SvImJ_T0045530.1 MGP_129S1SvImJ_G0023142.1 mouse_genomes_project 17 8446198 8562459 + Park2 protein_coding processed_transcript MGP_129S1SvImJ_T0045531.1 MGP_129S1SvImJ_G0023142.1 mouse_genomes_project 17 8675478 9110025 + MGP_129S1SvImJ_P0045531 Park2 protein_coding protein_coding MGP_129S1SvImJ_T0045532.1 MGP_129S1SvImJ_G0023142.1 mouse_genomes_project 17 8911214 9228005 + MGP_129S1SvImJ_P0045532 Park2 protein_coding protein_coding MGP_129S1SvImJ_T0045533.1 MGP_129S1SvImJ_G0023142.1 mouse_genomes_project 17 9109530 9692979 + MGP_129S1SvImJ_P0045533 Park2 protein_coding protein_coding MGP_129S1SvImJ_T0045534.1 MGP_129S1SvImJ_G0023142.1 mouse_genomes_project 17 9469325 9493299 + Park2 protein_coding processed_transcript MGP_129S1SvImJ_T0045535.1 MGP_129S1SvImJ_G0023142.1 mouse_genomes_project 17 9655390 9692974 + Park2 protein_coding processed_transcript MGP_129S1SvImJ_T0047719.1 MGP_129S1SvImJ_G0023735.1 mouse_genomes_project 17 38661938 38662880 - MGP_129S1SvImJ_P0047719 Olfr132 protein_coding protein_coding MGP_129S1SvImJ_T0047678.1 MGP_129S1SvImJ_G0023700.1 mouse_genomes_project 17 37568903 37571107 + MGP_129S1SvImJ_P0047678 Ubd protein_coding protein_coding MGP_129S1SvImJ_T0010229.1 MGP_129S1SvImJ_G0008345.1 mouse_genomes_project 17 36175566 36175651 - Mir877 miRNA miRNA MGP_129S1SvImJ_T0010188.1 MGP_129S1SvImJ_G0008304.1 mouse_genomes_project 17 15836276 15836346 + Mir99b miRNA miRNA MGP_129S1SvImJ_T0047539.1 MGP_129S1SvImJ_G0023661.1 mouse_genomes_project 17 36115707 36123969 - MGP_129S1SvImJ_P0047539 Mrps18b protein_coding protein_coding MGP_129S1SvImJ_T0047540.1 MGP_129S1SvImJ_G0023661.1 mouse_genomes_project 17 36115707 36123969 - MGP_129S1SvImJ_P0047540 Mrps18b protein_coding protein_coding MGP_129S1SvImJ_T0047541.1 MGP_129S1SvImJ_G0023661.1 mouse_genomes_project 17 36115714 36123910 - MGP_129S1SvImJ_P0047541 Mrps18b protein_coding protein_coding MGP_129S1SvImJ_T0047542.1 MGP_129S1SvImJ_G0023661.1 mouse_genomes_project 17 36115831 36117896 - Mrps18b protein_coding retained_intron MGP_129S1SvImJ_T0047543.1 MGP_129S1SvImJ_G0023661.1 mouse_genomes_project 17 36116179 36123917 - MGP_129S1SvImJ_P0047543 Mrps18b protein_coding protein_coding MGP_129S1SvImJ_T0047544.1 MGP_129S1SvImJ_G0023661.1 mouse_genomes_project 17 36116769 36123903 - MGP_129S1SvImJ_P0047544 Mrps18b protein_coding protein_coding MGP_129S1SvImJ_T0047545.1 MGP_129S1SvImJ_G0023661.1 mouse_genomes_project 17 36119120 36123957 - Mrps18b protein_coding retained_intron MGP_129S1SvImJ_T0047546.1 MGP_129S1SvImJ_G0023661.1 mouse_genomes_project 17 36119892 36123783 - Mrps18b protein_coding processed_transcript MGP_129S1SvImJ_T0048803.1 MGP_129S1SvImJ_G0024112.1 mouse_genomes_project 17 92162088 92207063 + MGP_129S1SvImJ_P0048803 Gtf2a1l protein_coding protein_coding MGP_129S1SvImJ_T0048804.1 MGP_129S1SvImJ_G0024112.1 mouse_genomes_project 17 92162124 92187550 + MGP_129S1SvImJ_P0048804 Gtf2a1l protein_coding protein_coding MGP_129S1SvImJ_T0046772.1 MGP_129S1SvImJ_G0023494.1 mouse_genomes_project 17 31463320 31467116 + MGP_129S1SvImJ_P0046772 Cryaa protein_coding protein_coding MGP_129S1SvImJ_T0006903.1 MGP_129S1SvImJ_G0005688.1 mouse_genomes_project 17 5846672 5859259 - Gm16702 lincRNA lincRNA MGP_129S1SvImJ_T0048805.1 MGP_129S1SvImJ_G0024113.1 mouse_genomes_project 17 92235200 92289259 - MGP_129S1SvImJ_P0048805 Lhcgr protein_coding protein_coding MGP_129S1SvImJ_T0046675.1 MGP_129S1SvImJ_G0023471.1 mouse_genomes_project 17 29207205 29253729 + MGP_129S1SvImJ_P0046675 Cmtr1 protein_coding protein_coding MGP_129S1SvImJ_T0046676.1 MGP_129S1SvImJ_G0023471.1 mouse_genomes_project 17 29207417 29220877 + MGP_129S1SvImJ_P0046676 Cmtr1 protein_coding protein_coding MGP_129S1SvImJ_T0046677.1 MGP_129S1SvImJ_G0023471.1 mouse_genomes_project 17 29226332 29237903 + Cmtr1 protein_coding retained_intron MGP_129S1SvImJ_T0046678.1 MGP_129S1SvImJ_G0023471.1 mouse_genomes_project 17 29226714 29229619 + MGP_129S1SvImJ_P0046678 Cmtr1 protein_coding protein_coding MGP_129S1SvImJ_T0046679.1 MGP_129S1SvImJ_G0023471.1 mouse_genomes_project 17 29227899 29237489 + Cmtr1 protein_coding processed_transcript MGP_129S1SvImJ_T0046680.1 MGP_129S1SvImJ_G0023471.1 mouse_genomes_project 17 29228629 29233382 + Cmtr1 protein_coding processed_transcript MGP_129S1SvImJ_T0046681.1 MGP_129S1SvImJ_G0023471.1 mouse_genomes_project 17 29229602 29237593 + Cmtr1 protein_coding retained_intron MGP_129S1SvImJ_T0046682.1 MGP_129S1SvImJ_G0023471.1 mouse_genomes_project 17 29233248 29237575 + Cmtr1 protein_coding retained_intron MGP_129S1SvImJ_T0046683.1 MGP_129S1SvImJ_G0023471.1 mouse_genomes_project 17 29234507 29251109 + Cmtr1 protein_coding retained_intron MGP_129S1SvImJ_T0046359.1 MGP_129S1SvImJ_G0023397.1 mouse_genomes_project 17 25402306 25440695 + MGP_129S1SvImJ_P0046359 Luc7l protein_coding protein_coding MGP_129S1SvImJ_T0046360.1 MGP_129S1SvImJ_G0023397.1 mouse_genomes_project 17 25402347 25446873 + MGP_129S1SvImJ_P0046360 Luc7l protein_coding protein_coding MGP_129S1SvImJ_T0046361.1 MGP_129S1SvImJ_G0023397.1 mouse_genomes_project 17 25402352 25437791 + MGP_129S1SvImJ_P0046361 Luc7l protein_coding protein_coding MGP_129S1SvImJ_T0046362.1 MGP_129S1SvImJ_G0023397.1 mouse_genomes_project 17 25402362 25443353 + MGP_129S1SvImJ_P0046362 Luc7l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046363.1 MGP_129S1SvImJ_G0023397.1 mouse_genomes_project 17 25402362 25443351 + MGP_129S1SvImJ_P0046363 Luc7l protein_coding protein_coding MGP_129S1SvImJ_T0046364.1 MGP_129S1SvImJ_G0023397.1 mouse_genomes_project 17 25402380 25440696 + Luc7l protein_coding retained_intron MGP_129S1SvImJ_T0046365.1 MGP_129S1SvImJ_G0023397.1 mouse_genomes_project 17 25402395 25440699 + MGP_129S1SvImJ_P0046365 Luc7l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046366.1 MGP_129S1SvImJ_G0023397.1 mouse_genomes_project 17 25402618 25419779 + MGP_129S1SvImJ_P0046366 Luc7l protein_coding protein_coding MGP_129S1SvImJ_T0046367.1 MGP_129S1SvImJ_G0023397.1 mouse_genomes_project 17 25402781 25403650 + Luc7l protein_coding processed_transcript MGP_129S1SvImJ_T0046368.1 MGP_129S1SvImJ_G0023397.1 mouse_genomes_project 17 25420660 25443329 + MGP_129S1SvImJ_P0046368 Luc7l protein_coding protein_coding MGP_129S1SvImJ_T0047957.1 MGP_129S1SvImJ_G0023819.1 mouse_genomes_project 17 47553769 47554269 - Cul9 protein_coding retained_intron MGP_129S1SvImJ_T0047958.1 MGP_129S1SvImJ_G0023819.1 mouse_genomes_project 17 47553802 47611061 - MGP_129S1SvImJ_P0047958 Cul9 protein_coding protein_coding MGP_129S1SvImJ_T0047959.1 MGP_129S1SvImJ_G0023819.1 mouse_genomes_project 17 47553807 47572740 - Cul9 protein_coding retained_intron MGP_129S1SvImJ_T0047960.1 MGP_129S1SvImJ_G0023819.1 mouse_genomes_project 17 47553813 47610974 - Cul9 protein_coding retained_intron MGP_129S1SvImJ_T0047961.1 MGP_129S1SvImJ_G0023819.1 mouse_genomes_project 17 47554995 47579458 - Cul9 protein_coding retained_intron MGP_129S1SvImJ_T0047962.1 MGP_129S1SvImJ_G0023819.1 mouse_genomes_project 17 47570470 47574715 - Cul9 protein_coding retained_intron MGP_129S1SvImJ_T0047963.1 MGP_129S1SvImJ_G0023819.1 mouse_genomes_project 17 47571534 47572646 - Cul9 protein_coding retained_intron MGP_129S1SvImJ_T0047964.1 MGP_129S1SvImJ_G0023819.1 mouse_genomes_project 17 47571534 47578816 - Cul9 protein_coding retained_intron MGP_129S1SvImJ_T0047965.1 MGP_129S1SvImJ_G0023819.1 mouse_genomes_project 17 47583503 47598128 - Cul9 protein_coding retained_intron MGP_129S1SvImJ_T0047966.1 MGP_129S1SvImJ_G0023819.1 mouse_genomes_project 17 47585533 47598388 - Cul9 protein_coding retained_intron MGP_129S1SvImJ_T0047354.1 MGP_129S1SvImJ_G0023623.1 mouse_genomes_project 17 35278109 35290254 + MGP_129S1SvImJ_P0047354 Bag6 protein_coding protein_coding MGP_129S1SvImJ_T0047355.1 MGP_129S1SvImJ_G0023623.1 mouse_genomes_project 17 35278109 35290237 + MGP_129S1SvImJ_P0047355 Bag6 protein_coding protein_coding MGP_129S1SvImJ_T0047356.1 MGP_129S1SvImJ_G0023623.1 mouse_genomes_project 17 35278136 35290238 + MGP_129S1SvImJ_P0047356 Bag6 protein_coding protein_coding MGP_129S1SvImJ_T0047357.1 MGP_129S1SvImJ_G0023623.1 mouse_genomes_project 17 35278159 35283241 + MGP_129S1SvImJ_P0047357 Bag6 protein_coding protein_coding MGP_129S1SvImJ_T0047358.1 MGP_129S1SvImJ_G0023623.1 mouse_genomes_project 17 35278417 35285527 + MGP_129S1SvImJ_P0047358 Bag6 protein_coding protein_coding MGP_129S1SvImJ_T0047359.1 MGP_129S1SvImJ_G0023623.1 mouse_genomes_project 17 35278441 35283304 + MGP_129S1SvImJ_P0047359 Bag6 protein_coding protein_coding MGP_129S1SvImJ_T0047360.1 MGP_129S1SvImJ_G0023623.1 mouse_genomes_project 17 35278649 35281637 + MGP_129S1SvImJ_P0047360 Bag6 protein_coding protein_coding MGP_129S1SvImJ_T0047361.1 MGP_129S1SvImJ_G0023623.1 mouse_genomes_project 17 35278661 35289281 + MGP_129S1SvImJ_P0047361 Bag6 protein_coding protein_coding MGP_129S1SvImJ_T0047362.1 MGP_129S1SvImJ_G0023623.1 mouse_genomes_project 17 35278675 35290252 + MGP_129S1SvImJ_P0047362 Bag6 protein_coding protein_coding MGP_129S1SvImJ_T0047363.1 MGP_129S1SvImJ_G0023623.1 mouse_genomes_project 17 35279054 35281897 + Bag6 protein_coding retained_intron MGP_129S1SvImJ_T0047364.1 MGP_129S1SvImJ_G0023623.1 mouse_genomes_project 17 35281504 35282782 + Bag6 protein_coding retained_intron MGP_129S1SvImJ_T0047365.1 MGP_129S1SvImJ_G0023623.1 mouse_genomes_project 17 35283162 35284325 + Bag6 protein_coding retained_intron MGP_129S1SvImJ_T0047366.1 MGP_129S1SvImJ_G0023623.1 mouse_genomes_project 17 35284090 35284918 + Bag6 protein_coding retained_intron MGP_129S1SvImJ_T0047367.1 MGP_129S1SvImJ_G0023623.1 mouse_genomes_project 17 35284908 35285534 + Bag6 protein_coding retained_intron MGP_129S1SvImJ_T0047368.1 MGP_129S1SvImJ_G0023623.1 mouse_genomes_project 17 35288819 35290251 + MGP_129S1SvImJ_P0047368 Bag6 protein_coding protein_coding MGP_129S1SvImJ_T0047369.1 MGP_129S1SvImJ_G0023623.1 mouse_genomes_project 17 35289308 35290228 + Bag6 protein_coding retained_intron MGP_129S1SvImJ_T0047992.1 MGP_129S1SvImJ_G0023831.1 mouse_genomes_project 17 47825780 47846946 - MGP_129S1SvImJ_P0047992 Cnpy3 protein_coding protein_coding MGP_129S1SvImJ_T0047993.1 MGP_129S1SvImJ_G0023831.1 mouse_genomes_project 17 47825831 47846929 - MGP_129S1SvImJ_P0047993 Cnpy3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047994.1 MGP_129S1SvImJ_G0023831.1 mouse_genomes_project 17 47826724 47827679 - Cnpy3 protein_coding retained_intron MGP_129S1SvImJ_T0047995.1 MGP_129S1SvImJ_G0023831.1 mouse_genomes_project 17 47837455 47846927 - MGP_129S1SvImJ_P0047995 Cnpy3 protein_coding protein_coding MGP_129S1SvImJ_T0047996.1 MGP_129S1SvImJ_G0023831.1 mouse_genomes_project 17 47837687 47846909 - Cnpy3 protein_coding retained_intron MGP_129S1SvImJ_T0048312.1 MGP_129S1SvImJ_G0023935.1 mouse_genomes_project 17 58427020 58430810 - MGP_129S1SvImJ_P0048312 Vmac protein_coding protein_coding MGP_129S1SvImJ_T0048313.1 MGP_129S1SvImJ_G0023935.1 mouse_genomes_project 17 58427020 58430032 - MGP_129S1SvImJ_P0048313 Vmac protein_coding protein_coding MGP_129S1SvImJ_T0045727.1 MGP_129S1SvImJ_G0023220.1 mouse_genomes_project 17 19690320 19691280 - MGP_129S1SvImJ_P0045727 Vmn1r233 protein_coding protein_coding MGP_129S1SvImJ_T0048663.1 MGP_129S1SvImJ_G0024060.1 mouse_genomes_project 17 83148665 83202111 - MGP_129S1SvImJ_P0048663 Dhx57 protein_coding protein_coding MGP_129S1SvImJ_T0048664.1 MGP_129S1SvImJ_G0024060.1 mouse_genomes_project 17 83148665 83202111 - MGP_129S1SvImJ_P0048664 Dhx57 protein_coding protein_coding MGP_129S1SvImJ_T0048658.1 MGP_129S1SvImJ_G0024057.1 mouse_genomes_project 17 83107406 83114732 - MGP_129S1SvImJ_P0048658 Srsf7 protein_coding protein_coding MGP_129S1SvImJ_T0048721.1 MGP_129S1SvImJ_G0024086.1 mouse_genomes_project 17 88280732 88307427 - MGP_129S1SvImJ_P0048721 Prepl protein_coding protein_coding MGP_129S1SvImJ_T0048722.1 MGP_129S1SvImJ_G0024086.1 mouse_genomes_project 17 88280732 88307427 - MGP_129S1SvImJ_P0048722 Prepl protein_coding protein_coding MGP_129S1SvImJ_T0046009.1 MGP_129S1SvImJ_G0023317.1 mouse_genomes_project 17 23729628 23731846 - MGP_129S1SvImJ_P0046009 Rnf151 protein_coding protein_coding MGP_129S1SvImJ_T0047465.1 MGP_129S1SvImJ_G0023651.1 mouse_genomes_project 17 35866162 35885356 - MGP_129S1SvImJ_P0047465 Ddr1 protein_coding protein_coding MGP_129S1SvImJ_T0047466.1 MGP_129S1SvImJ_G0023651.1 mouse_genomes_project 17 35866162 35889169 - MGP_129S1SvImJ_P0047466 Ddr1 protein_coding protein_coding MGP_129S1SvImJ_T0047467.1 MGP_129S1SvImJ_G0023651.1 mouse_genomes_project 17 35866165 35888611 - MGP_129S1SvImJ_P0047467 Ddr1 protein_coding protein_coding MGP_129S1SvImJ_T0047468.1 MGP_129S1SvImJ_G0023651.1 mouse_genomes_project 17 35866165 35888709 - MGP_129S1SvImJ_P0047468 Ddr1 protein_coding protein_coding MGP_129S1SvImJ_T0047469.1 MGP_129S1SvImJ_G0023651.1 mouse_genomes_project 17 35866165 35886753 - MGP_129S1SvImJ_P0047469 Ddr1 protein_coding protein_coding MGP_129S1SvImJ_T0047470.1 MGP_129S1SvImJ_G0023651.1 mouse_genomes_project 17 35867026 35885298 - MGP_129S1SvImJ_P0047470 Ddr1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047471.1 MGP_129S1SvImJ_G0023651.1 mouse_genomes_project 17 35869898 35886673 - MGP_129S1SvImJ_P0047471 Ddr1 protein_coding protein_coding MGP_129S1SvImJ_T0047472.1 MGP_129S1SvImJ_G0023651.1 mouse_genomes_project 17 35874619 35888547 - MGP_129S1SvImJ_P0047472 Ddr1 protein_coding protein_coding MGP_129S1SvImJ_T0047473.1 MGP_129S1SvImJ_G0023651.1 mouse_genomes_project 17 35874647 35889191 - MGP_129S1SvImJ_P0047473 Ddr1 protein_coding protein_coding MGP_129S1SvImJ_T0047474.1 MGP_129S1SvImJ_G0023651.1 mouse_genomes_project 17 35874747 35882716 - MGP_129S1SvImJ_P0047474 Ddr1 protein_coding protein_coding MGP_129S1SvImJ_T0047475.1 MGP_129S1SvImJ_G0023651.1 mouse_genomes_project 17 35875872 35886755 - MGP_129S1SvImJ_P0047475 Ddr1 protein_coding protein_coding MGP_129S1SvImJ_T0047476.1 MGP_129S1SvImJ_G0023651.1 mouse_genomes_project 17 35877734 35887026 - MGP_129S1SvImJ_P0047476 Ddr1 protein_coding protein_coding MGP_129S1SvImJ_T0048117.1 MGP_129S1SvImJ_G0023868.1 mouse_genomes_project 17 49588524 49597094 + MGP_129S1SvImJ_P0048117 B430306N03Rik protein_coding protein_coding MGP_129S1SvImJ_T0048118.1 MGP_129S1SvImJ_G0023868.1 mouse_genomes_project 17 49590734 49597082 + MGP_129S1SvImJ_P0048118 B430306N03Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0102364.1 MGP_129S1SvImJ_G0040198.1 mouse_genomes_project 17 37855942 37856499 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0047789.1 MGP_129S1SvImJ_G0023781.1 mouse_genomes_project 17 45011697 45019386 + MGP_129S1SvImJ_P0047789 Enpp5 protein_coding protein_coding MGP_129S1SvImJ_T0047790.1 MGP_129S1SvImJ_G0023781.1 mouse_genomes_project 17 45011729 45019378 + MGP_129S1SvImJ_P0047790 Enpp5 protein_coding protein_coding MGP_129S1SvImJ_T0047791.1 MGP_129S1SvImJ_G0023781.1 mouse_genomes_project 17 45011763 45019386 + MGP_129S1SvImJ_P0047791 Enpp5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0001020.1 MGP_129S1SvImJ_G0000949.1 mouse_genomes_project 17 73808901 73811685 - TEC TEC MGP_129S1SvImJ_T0047132.1 MGP_129S1SvImJ_G0023578.1 mouse_genomes_project 17 34665476 34672031 + MGP_129S1SvImJ_P0047132 Pbx2 protein_coding protein_coding MGP_129S1SvImJ_T0047133.1 MGP_129S1SvImJ_G0023578.1 mouse_genomes_project 17 34665656 34671044 + MGP_129S1SvImJ_P0047133 Pbx2 protein_coding protein_coding MGP_129S1SvImJ_T0047134.1 MGP_129S1SvImJ_G0023578.1 mouse_genomes_project 17 34666316 34667321 + MGP_129S1SvImJ_P0047134 Pbx2 protein_coding protein_coding MGP_129S1SvImJ_T0047135.1 MGP_129S1SvImJ_G0023578.1 mouse_genomes_project 17 34670087 34670855 + Pbx2 protein_coding retained_intron MGP_129S1SvImJ_T0013227.1 MGP_129S1SvImJ_G0011316.1 mouse_genomes_project 17 2964107 2964591 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0047081.1 MGP_129S1SvImJ_G0023564.1 mouse_genomes_project 17 34206013 34218634 + MGP_129S1SvImJ_P0047081 Tap2 protein_coding protein_coding MGP_129S1SvImJ_T0047082.1 MGP_129S1SvImJ_G0023564.1 mouse_genomes_project 17 34206566 34207855 + MGP_129S1SvImJ_P0047082 Tap2 protein_coding protein_coding MGP_129S1SvImJ_T0047083.1 MGP_129S1SvImJ_G0023564.1 mouse_genomes_project 17 34207053 34218631 + Tap2 protein_coding retained_intron MGP_129S1SvImJ_T0047084.1 MGP_129S1SvImJ_G0023564.1 mouse_genomes_project 17 34207586 34208054 + MGP_129S1SvImJ_P0047084 Tap2 protein_coding protein_coding MGP_129S1SvImJ_T0047085.1 MGP_129S1SvImJ_G0023564.1 mouse_genomes_project 17 34210018 34211533 + Tap2 protein_coding processed_transcript MGP_129S1SvImJ_T0099565.1 MGP_129S1SvImJ_G0037632.1 mouse_genomes_project 17 49077730 49077900 - Gm25201 snRNA snRNA MGP_129S1SvImJ_T0047758.1 MGP_129S1SvImJ_G0023766.1 mouse_genomes_project 17 43134135 43342811 + MGP_129S1SvImJ_P0047758 Ptchd4 protein_coding protein_coding MGP_129S1SvImJ_T0006979.1 MGP_129S1SvImJ_G0005745.1 mouse_genomes_project 17 57577327 57581938 - Gm16712 lincRNA lincRNA MGP_129S1SvImJ_T0099546.1 MGP_129S1SvImJ_G0037613.1 mouse_genomes_project 17 11433400 11433507 + Gm24867 snRNA snRNA MGP_129S1SvImJ_T0013318.1 MGP_129S1SvImJ_G0011407.1 mouse_genomes_project 17 90439899 90440639 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048235.1 MGP_129S1SvImJ_G0023908.1 mouse_genomes_project 17 57641811 57664402 - MGP_129S1SvImJ_P0048235 Sh3gl1 protein_coding protein_coding MGP_129S1SvImJ_T0102363.1 MGP_129S1SvImJ_G0040197.1 mouse_genomes_project 17 37811310 37819197 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0047617.1 MGP_129S1SvImJ_G0023683.1 mouse_genomes_project 17 37210420 37216917 - MGP_129S1SvImJ_P0047617 Trim15 protein_coding protein_coding MGP_129S1SvImJ_T0047618.1 MGP_129S1SvImJ_G0023683.1 mouse_genomes_project 17 37210422 37216940 - MGP_129S1SvImJ_P0047618 Trim15 protein_coding protein_coding MGP_129S1SvImJ_T0047619.1 MGP_129S1SvImJ_G0023683.1 mouse_genomes_project 17 37211047 37216476 - MGP_129S1SvImJ_P0047619 Trim15 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0013322.1 MGP_129S1SvImJ_G0011411.1 mouse_genomes_project 17 96207143 96208560 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0046317.1 MGP_129S1SvImJ_G0023388.1 mouse_genomes_project 17 25209347 25219645 - MGP_129S1SvImJ_P0046317 Decr2 protein_coding protein_coding MGP_129S1SvImJ_T0046318.1 MGP_129S1SvImJ_G0023388.1 mouse_genomes_project 17 25211266 25212299 - Decr2 protein_coding processed_transcript MGP_129S1SvImJ_T0046319.1 MGP_129S1SvImJ_G0023388.1 mouse_genomes_project 17 25212015 25219645 - Decr2 protein_coding retained_intron MGP_129S1SvImJ_T0046320.1 MGP_129S1SvImJ_G0023388.1 mouse_genomes_project 17 25212472 25219635 - Decr2 protein_coding processed_transcript MGP_129S1SvImJ_T0046321.1 MGP_129S1SvImJ_G0023388.1 mouse_genomes_project 17 25216769 25219674 - Decr2 protein_coding processed_transcript MGP_129S1SvImJ_T0046241.1 MGP_129S1SvImJ_G0023374.1 mouse_genomes_project 17 24931797 24939096 - MGP_129S1SvImJ_P0046241 Gm20683 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0006940.1 MGP_129S1SvImJ_G0005717.1 mouse_genomes_project 17 31932167 31961834 + Gm17276 lincRNA lincRNA MGP_129S1SvImJ_T0046563.1 MGP_129S1SvImJ_G0023445.1 mouse_genomes_project 17 28006923 28016298 + MGP_129S1SvImJ_P0046563 Lhfpl5 protein_coding protein_coding MGP_129S1SvImJ_T0006911.1 MGP_129S1SvImJ_G0005695.1 mouse_genomes_project 17 15362232 15373773 - lincRNA lincRNA MGP_129S1SvImJ_T0099569.1 MGP_129S1SvImJ_G0037636.1 mouse_genomes_project 17 59490242 59490354 + Gm25102 snRNA snRNA MGP_129S1SvImJ_T0048665.1 MGP_129S1SvImJ_G0024061.1 mouse_genomes_project 17 83201846 83210729 + MGP_129S1SvImJ_P0048665 Morn2 protein_coding protein_coding MGP_129S1SvImJ_T0047477.1 MGP_129S1SvImJ_G0023652.1 mouse_genomes_project 17 36015040 36016280 + MGP_129S1SvImJ_P0047477 Ier3 protein_coding protein_coding MGP_129S1SvImJ_T0011446.1 MGP_129S1SvImJ_G0009562.1 mouse_genomes_project 17 37322651 37322727 - Gm27735 misc_RNA misc_RNA MGP_129S1SvImJ_T0101874.1 MGP_129S1SvImJ_G0039806.1 mouse_genomes_project 17 35432676 35433732 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101875.1 MGP_129S1SvImJ_G0039806.1 mouse_genomes_project 17 35433059 35433915 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0047014.1 MGP_129S1SvImJ_G0023552.1 mouse_genomes_project 17 33995471 33996537 - H2-Ke6 protein_coding retained_intron MGP_129S1SvImJ_T0047015.1 MGP_129S1SvImJ_G0023552.1 mouse_genomes_project 17 33995471 33996194 - H2-Ke6 protein_coding retained_intron MGP_129S1SvImJ_T0047016.1 MGP_129S1SvImJ_G0023552.1 mouse_genomes_project 17 33995471 33997495 - MGP_129S1SvImJ_P0047016 H2-Ke6 protein_coding protein_coding MGP_129S1SvImJ_T0047017.1 MGP_129S1SvImJ_G0023552.1 mouse_genomes_project 17 33995474 33997485 - H2-Ke6 protein_coding retained_intron MGP_129S1SvImJ_T0047018.1 MGP_129S1SvImJ_G0023552.1 mouse_genomes_project 17 33995595 33996391 - H2-Ke6 protein_coding retained_intron MGP_129S1SvImJ_T0047019.1 MGP_129S1SvImJ_G0023552.1 mouse_genomes_project 17 33995846 33997302 - H2-Ke6 protein_coding processed_transcript MGP_129S1SvImJ_T0047020.1 MGP_129S1SvImJ_G0023552.1 mouse_genomes_project 17 33996107 33997499 - MGP_129S1SvImJ_P0047020 H2-Ke6 protein_coding protein_coding MGP_129S1SvImJ_T0047021.1 MGP_129S1SvImJ_G0023552.1 mouse_genomes_project 17 33996352 33997477 - H2-Ke6 protein_coding retained_intron MGP_129S1SvImJ_T0047061.1 MGP_129S1SvImJ_G0023558.1 mouse_genomes_project 17 34117118 34121038 + MGP_129S1SvImJ_P0047061 H2-DMa protein_coding protein_coding MGP_129S1SvImJ_T0047062.1 MGP_129S1SvImJ_G0023558.1 mouse_genomes_project 17 34118964 34120117 + H2-DMa protein_coding retained_intron MGP_129S1SvImJ_T0102305.1 MGP_129S1SvImJ_G0040139.1 mouse_genomes_project 17 21905976 21906623 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0045543.1 MGP_129S1SvImJ_G0023145.1 mouse_genomes_project 17 10030375 10072452 + MGP_129S1SvImJ_P0045543 Plg protein_coding protein_coding MGP_129S1SvImJ_T0048549.1 MGP_129S1SvImJ_G0024017.1 mouse_genomes_project 17 75455977 75480595 + MGP_129S1SvImJ_P0048549 Lbh protein_coding protein_coding MGP_129S1SvImJ_T0013231.1 MGP_129S1SvImJ_G0011320.1 mouse_genomes_project 17 6863301 6864288 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0047675.1 MGP_129S1SvImJ_G0023697.1 mouse_genomes_project 17 37461105 37462044 - MGP_129S1SvImJ_P0047675 Olfr91 protein_coding protein_coding MGP_129S1SvImJ_T0003734.1 MGP_129S1SvImJ_G0003370.1 mouse_genomes_project 17 8691695 8698916 - Gm28505 antisense antisense MGP_129S1SvImJ_T0102280.1 MGP_129S1SvImJ_G0040114.1 mouse_genomes_project 17 16092135 16548292 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0048215.1 MGP_129S1SvImJ_G0023897.1 mouse_genomes_project 17 57272010 57327816 - MGP_129S1SvImJ_P0048215 Pot1b protein_coding protein_coding MGP_129S1SvImJ_T0100830.1 MGP_129S1SvImJ_G0038897.1 mouse_genomes_project 17 49930118 49930250 + Gm24071 snoRNA snoRNA MGP_129S1SvImJ_T0013314.1 MGP_129S1SvImJ_G0011403.1 mouse_genomes_project 17 84786747 84787126 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003756.1 MGP_129S1SvImJ_G0003386.1 mouse_genomes_project 17 28400759 28415557 + Gm16191 antisense antisense MGP_129S1SvImJ_T0003757.1 MGP_129S1SvImJ_G0003386.1 mouse_genomes_project 17 28409672 28410330 + Gm16191 antisense antisense MGP_129S1SvImJ_T0048754.1 MGP_129S1SvImJ_G0024101.1 mouse_genomes_project 17 90660396 90767655 + MGP_129S1SvImJ_P0048754 Ttc7 protein_coding protein_coding MGP_129S1SvImJ_T0048755.1 MGP_129S1SvImJ_G0024101.1 mouse_genomes_project 17 90660403 90670426 + Ttc7 protein_coding processed_transcript MGP_129S1SvImJ_T0048756.1 MGP_129S1SvImJ_G0024101.1 mouse_genomes_project 17 90660415 90757738 + MGP_129S1SvImJ_P0048756 Ttc7 protein_coding protein_coding MGP_129S1SvImJ_T0048757.1 MGP_129S1SvImJ_G0024101.1 mouse_genomes_project 17 90660461 90747770 + MGP_129S1SvImJ_P0048757 Ttc7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048758.1 MGP_129S1SvImJ_G0024101.1 mouse_genomes_project 17 90670307 90765972 + MGP_129S1SvImJ_P0048758 Ttc7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048759.1 MGP_129S1SvImJ_G0024101.1 mouse_genomes_project 17 90691800 90714833 + Ttc7 protein_coding processed_transcript MGP_129S1SvImJ_T0048760.1 MGP_129S1SvImJ_G0024101.1 mouse_genomes_project 17 90707313 90719035 + Ttc7 protein_coding retained_intron MGP_129S1SvImJ_T0048761.1 MGP_129S1SvImJ_G0024101.1 mouse_genomes_project 17 90714965 90724662 + Ttc7 protein_coding processed_transcript MGP_129S1SvImJ_T0048762.1 MGP_129S1SvImJ_G0024101.1 mouse_genomes_project 17 90764738 90767655 + Ttc7 protein_coding processed_transcript MGP_129S1SvImJ_T0047263.1 MGP_129S1SvImJ_G0023601.1 mouse_genomes_project 17 35098528 35101886 - MGP_129S1SvImJ_P0047263 Hspa1a protein_coding protein_coding MGP_129S1SvImJ_T0010198.1 MGP_129S1SvImJ_G0008314.1 mouse_genomes_project 17 24296376 24296464 - Mir3547 miRNA miRNA MGP_129S1SvImJ_T0048152.1 MGP_129S1SvImJ_G0023876.1 mouse_genomes_project 17 50272154 50447224 + MGP_129S1SvImJ_P0048152 Lrfn2 protein_coding protein_coding MGP_129S1SvImJ_T0048647.1 MGP_129S1SvImJ_G0024054.1 mouse_genomes_project 17 82725308 82774439 - MGP_129S1SvImJ_P0048647 Atl2 protein_coding protein_coding MGP_129S1SvImJ_T0048648.1 MGP_129S1SvImJ_G0024054.1 mouse_genomes_project 17 82725315 82774441 - MGP_129S1SvImJ_P0048648 Atl2 protein_coding protein_coding MGP_129S1SvImJ_T0048607.1 MGP_129S1SvImJ_G0024035.1 mouse_genomes_project 17 78250869 78266037 - MGP_129S1SvImJ_P0048607 Fam98a protein_coding protein_coding MGP_129S1SvImJ_T0048608.1 MGP_129S1SvImJ_G0024035.1 mouse_genomes_project 17 78252814 78254360 - Fam98a protein_coding retained_intron MGP_129S1SvImJ_T0048609.1 MGP_129S1SvImJ_G0024035.1 mouse_genomes_project 17 78258250 78265887 - Fam98a protein_coding retained_intron MGP_129S1SvImJ_T0046386.1 MGP_129S1SvImJ_G0023404.1 mouse_genomes_project 17 25868000 25891890 + MGP_129S1SvImJ_P0046386 Atp6v0e protein_coding protein_coding MGP_129S1SvImJ_T0046387.1 MGP_129S1SvImJ_G0023404.1 mouse_genomes_project 17 25868016 25890197 + MGP_129S1SvImJ_P0046387 Atp6v0e protein_coding protein_coding MGP_129S1SvImJ_T0013250.1 MGP_129S1SvImJ_G0011339.1 mouse_genomes_project 17 33931929 33932188 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048632.1 MGP_129S1SvImJ_G0024046.1 mouse_genomes_project 17 81758907 81777048 - MGP_129S1SvImJ_P0048632 Cebpz protein_coding protein_coding MGP_129S1SvImJ_T0010204.1 MGP_129S1SvImJ_G0008320.1 mouse_genomes_project 17 26142050 26142108 + Gm27775 miRNA miRNA MGP_129S1SvImJ_T0013252.1 MGP_129S1SvImJ_G0011341.1 mouse_genomes_project 17 34112786 34112999 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048412.1 MGP_129S1SvImJ_G0023981.1 mouse_genomes_project 17 68003922 68042935 - MGP_129S1SvImJ_P0048412 Ralbp1 protein_coding protein_coding MGP_129S1SvImJ_T0048413.1 MGP_129S1SvImJ_G0023981.1 mouse_genomes_project 17 68003922 68042103 - MGP_129S1SvImJ_P0048413 Ralbp1 protein_coding protein_coding MGP_129S1SvImJ_T0013229.1 MGP_129S1SvImJ_G0011318.1 mouse_genomes_project 17 6046276 6050854 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048276.1 MGP_129S1SvImJ_G0023927.1 mouse_genomes_project 17 58210667 58211903 - MGP_129S1SvImJ_P0048276 Znrf4 protein_coding protein_coding MGP_129S1SvImJ_T0010203.1 MGP_129S1SvImJ_G0008319.1 mouse_genomes_project 17 26132158 26132216 + Gm27740 miRNA miRNA MGP_129S1SvImJ_T0003726.1 MGP_129S1SvImJ_G0003366.1 mouse_genomes_project 17 4143434 4149198 + antisense antisense MGP_129S1SvImJ_T0047930.1 MGP_129S1SvImJ_G0023811.1 mouse_genomes_project 17 47345837 47349549 + MGP_129S1SvImJ_P0047930 Dlk2 protein_coding protein_coding MGP_129S1SvImJ_T0047931.1 MGP_129S1SvImJ_G0023811.1 mouse_genomes_project 17 47345837 47351815 + MGP_129S1SvImJ_P0047931 Dlk2 protein_coding protein_coding MGP_129S1SvImJ_T0047932.1 MGP_129S1SvImJ_G0023811.1 mouse_genomes_project 17 47346334 47351822 + MGP_129S1SvImJ_P0047932 Dlk2 protein_coding protein_coding MGP_129S1SvImJ_T0048386.1 MGP_129S1SvImJ_G0023973.1 mouse_genomes_project 17 66353561 66405425 - MGP_129S1SvImJ_P0048386 Pja2 protein_coding protein_coding MGP_129S1SvImJ_T0048387.1 MGP_129S1SvImJ_G0023973.1 mouse_genomes_project 17 66353562 66386155 - MGP_129S1SvImJ_P0048387 Pja2 protein_coding protein_coding MGP_129S1SvImJ_T0048388.1 MGP_129S1SvImJ_G0023973.1 mouse_genomes_project 17 66353562 66386155 - MGP_129S1SvImJ_P0048388 Pja2 protein_coding protein_coding MGP_129S1SvImJ_T0048389.1 MGP_129S1SvImJ_G0023973.1 mouse_genomes_project 17 66353576 66405374 - MGP_129S1SvImJ_P0048389 Pja2 protein_coding protein_coding MGP_129S1SvImJ_T0045609.1 MGP_129S1SvImJ_G0023163.1 mouse_genomes_project 17 12003464 12012071 - MGP_129S1SvImJ_P0045609 Dact2 protein_coding protein_coding MGP_129S1SvImJ_T0046085.1 MGP_129S1SvImJ_G0023335.1 mouse_genomes_project 17 23991386 24046759 - MGP_129S1SvImJ_P0046085 Cramp1l protein_coding unknown_likely_coding MGP_129S1SvImJ_T0045698.1 MGP_129S1SvImJ_G0023197.1 mouse_genomes_project 17 16363628 16402183 + MGP_129S1SvImJ_P0045698 Vmn2r93 protein_coding protein_coding MGP_129S1SvImJ_T0017587.1 MGP_129S1SvImJ_G0015342.1 mouse_genomes_project 17 24651222 24655449 + 2810468N07Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0046178.1 MGP_129S1SvImJ_G0023357.1 mouse_genomes_project 17 24565591 24573008 - MGP_129S1SvImJ_P0046178 Sstr5 protein_coding protein_coding MGP_129S1SvImJ_T0046179.1 MGP_129S1SvImJ_G0023357.1 mouse_genomes_project 17 24565591 24573008 - MGP_129S1SvImJ_P0046179 Sstr5 protein_coding protein_coding MGP_129S1SvImJ_T0046442.1 MGP_129S1SvImJ_G0023421.1 mouse_genomes_project 17 26869005 26874844 + MGP_129S1SvImJ_P0046442 protein_coding protein_coding MGP_129S1SvImJ_T0006992.1 MGP_129S1SvImJ_G0005753.1 mouse_genomes_project 17 77236555 77285389 - Gm26749 lincRNA lincRNA MGP_129S1SvImJ_T0048709.1 MGP_129S1SvImJ_G0024082.1 mouse_genomes_project 17 87864032 87881170 + MGP_129S1SvImJ_P0048709 Abcg8 protein_coding protein_coding MGP_129S1SvImJ_T0048710.1 MGP_129S1SvImJ_G0024082.1 mouse_genomes_project 17 87864143 87881178 + MGP_129S1SvImJ_P0048710 Abcg8 protein_coding protein_coding MGP_129S1SvImJ_T0045667.1 MGP_129S1SvImJ_G0023181.1 mouse_genomes_project 17 15382170 15448124 + MGP_129S1SvImJ_P0045667 Lix1 protein_coding protein_coding MGP_129S1SvImJ_T0045668.1 MGP_129S1SvImJ_G0023181.1 mouse_genomes_project 17 15435239 15448124 + Lix1 protein_coding processed_transcript MGP_129S1SvImJ_T0006942.1 MGP_129S1SvImJ_G0005719.1 mouse_genomes_project 17 32212545 32214585 + lincRNA lincRNA MGP_129S1SvImJ_T0045637.1 MGP_129S1SvImJ_G0023175.1 mouse_genomes_project 17 13342675 13347384 + MGP_129S1SvImJ_P0045637 Tbp protein_coding protein_coding MGP_129S1SvImJ_T0045638.1 MGP_129S1SvImJ_G0023175.1 mouse_genomes_project 17 13342675 13361027 + MGP_129S1SvImJ_P0045638 Tbp protein_coding protein_coding MGP_129S1SvImJ_T0045639.1 MGP_129S1SvImJ_G0023175.1 mouse_genomes_project 17 13342675 13371968 + MGP_129S1SvImJ_P0045639 Tbp protein_coding protein_coding MGP_129S1SvImJ_T0045640.1 MGP_129S1SvImJ_G0023175.1 mouse_genomes_project 17 13342688 13350233 + MGP_129S1SvImJ_P0045640 Tbp protein_coding protein_coding MGP_129S1SvImJ_T0045641.1 MGP_129S1SvImJ_G0023175.1 mouse_genomes_project 17 13342697 13361027 + MGP_129S1SvImJ_P0045641 Tbp protein_coding protein_coding MGP_129S1SvImJ_T0045642.1 MGP_129S1SvImJ_G0023175.1 mouse_genomes_project 17 13342699 13350138 + MGP_129S1SvImJ_P0045642 Tbp protein_coding protein_coding MGP_129S1SvImJ_T0045643.1 MGP_129S1SvImJ_G0023175.1 mouse_genomes_project 17 13342709 13357175 + MGP_129S1SvImJ_P0045643 Tbp protein_coding protein_coding MGP_129S1SvImJ_T0045644.1 MGP_129S1SvImJ_G0023175.1 mouse_genomes_project 17 13342715 13347226 + MGP_129S1SvImJ_P0045644 Tbp protein_coding protein_coding MGP_129S1SvImJ_T0045645.1 MGP_129S1SvImJ_G0023175.1 mouse_genomes_project 17 13342747 13361027 + MGP_129S1SvImJ_P0045645 Tbp protein_coding protein_coding MGP_129S1SvImJ_T0045646.1 MGP_129S1SvImJ_G0023175.1 mouse_genomes_project 17 13347361 13360468 + MGP_129S1SvImJ_P0045646 Tbp protein_coding protein_coding MGP_129S1SvImJ_T0045647.1 MGP_129S1SvImJ_G0023175.1 mouse_genomes_project 17 13358285 13360535 + Tbp protein_coding retained_intron MGP_129S1SvImJ_T0048250.1 MGP_129S1SvImJ_G0023915.1 mouse_genomes_project 17 57770512 57790929 - MGP_129S1SvImJ_P0048250 Sema6b protein_coding protein_coding MGP_129S1SvImJ_T0048251.1 MGP_129S1SvImJ_G0023915.1 mouse_genomes_project 17 57770512 57781288 - MGP_129S1SvImJ_P0048251 Sema6b protein_coding protein_coding MGP_129S1SvImJ_T0017589.1 MGP_129S1SvImJ_G0015344.1 mouse_genomes_project 17 29095212 29220774 + Gm28052 processed_transcript processed_transcript MGP_129S1SvImJ_T0045734.1 MGP_129S1SvImJ_G0023227.1 mouse_genomes_project 17 20122216 20136223 + MGP_129S1SvImJ_P0045734 Zfp677 protein_coding protein_coding MGP_129S1SvImJ_T0045735.1 MGP_129S1SvImJ_G0023227.1 mouse_genomes_project 17 20122216 20136220 + MGP_129S1SvImJ_P0045735 Zfp677 protein_coding protein_coding MGP_129S1SvImJ_T0013298.1 MGP_129S1SvImJ_G0011387.1 mouse_genomes_project 17 68630492 68630871 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011462.1 MGP_129S1SvImJ_G0009578.1 mouse_genomes_project 17 88871372 88871571 + Gm27502 misc_RNA misc_RNA MGP_129S1SvImJ_T0046928.1 MGP_129S1SvImJ_G0023536.1 mouse_genomes_project 17 33708082 33715908 - MGP_129S1SvImJ_P0046928 Angptl4 protein_coding protein_coding MGP_129S1SvImJ_T0046929.1 MGP_129S1SvImJ_G0023536.1 mouse_genomes_project 17 33709240 33715876 - MGP_129S1SvImJ_P0046929 Angptl4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046930.1 MGP_129S1SvImJ_G0023536.1 mouse_genomes_project 17 33711303 33712798 - Angptl4 protein_coding retained_intron MGP_129S1SvImJ_T0046931.1 MGP_129S1SvImJ_G0023536.1 mouse_genomes_project 17 33711344 33713476 - Angptl4 protein_coding processed_transcript MGP_129S1SvImJ_T0003752.1 MGP_129S1SvImJ_G0003382.1 mouse_genomes_project 17 27305326 27312720 - Gm15597 antisense antisense MGP_129S1SvImJ_T0047701.1 MGP_129S1SvImJ_G0023719.1 mouse_genomes_project 17 38015691 38016691 - MGP_129S1SvImJ_P0047701 Olfr114 protein_coding protein_coding MGP_129S1SvImJ_T0013295.1 MGP_129S1SvImJ_G0011384.1 mouse_genomes_project 17 63280142 63281184 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0045837.1 MGP_129S1SvImJ_G0023272.1 mouse_genomes_project 17 22709259 22730938 + MGP_129S1SvImJ_P0045837 Srrm2 protein_coding protein_coding MGP_129S1SvImJ_T0045838.1 MGP_129S1SvImJ_G0023272.1 mouse_genomes_project 17 22725629 22749899 + MGP_129S1SvImJ_P0045838 Srrm2 protein_coding protein_coding MGP_129S1SvImJ_T0045839.1 MGP_129S1SvImJ_G0023272.1 mouse_genomes_project 17 22725663 22749904 + MGP_129S1SvImJ_P0045839 Srrm2 protein_coding protein_coding MGP_129S1SvImJ_T0045840.1 MGP_129S1SvImJ_G0023272.1 mouse_genomes_project 17 22730339 22733651 + MGP_129S1SvImJ_P0045840 Srrm2 protein_coding protein_coding MGP_129S1SvImJ_T0045841.1 MGP_129S1SvImJ_G0023272.1 mouse_genomes_project 17 22730519 22731130 + Srrm2 protein_coding retained_intron MGP_129S1SvImJ_T0045842.1 MGP_129S1SvImJ_G0023272.1 mouse_genomes_project 17 22736903 22737831 + MGP_129S1SvImJ_P0045842 Srrm2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045843.1 MGP_129S1SvImJ_G0023272.1 mouse_genomes_project 17 22737131 22741717 + Srrm2 protein_coding retained_intron MGP_129S1SvImJ_T0045844.1 MGP_129S1SvImJ_G0023272.1 mouse_genomes_project 17 22744532 22747753 + Srrm2 protein_coding processed_transcript MGP_129S1SvImJ_T0045845.1 MGP_129S1SvImJ_G0023272.1 mouse_genomes_project 17 22746611 22747885 + MGP_129S1SvImJ_P0045845 Srrm2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045846.1 MGP_129S1SvImJ_G0023272.1 mouse_genomes_project 17 22748745 22749533 + Srrm2 protein_coding retained_intron MGP_129S1SvImJ_T0048571.1 MGP_129S1SvImJ_G0024029.1 mouse_genomes_project 17 77060452 77102896 - MGP_129S1SvImJ_P0048571 Nlrc4 protein_coding protein_coding MGP_129S1SvImJ_T0048796.1 MGP_129S1SvImJ_G0024111.1 mouse_genomes_project 17 92095420 92129029 + MGP_129S1SvImJ_P0048796 Ston1 protein_coding protein_coding MGP_129S1SvImJ_T0048797.1 MGP_129S1SvImJ_G0024111.1 mouse_genomes_project 17 92095432 92138828 + Ston1 protein_coding processed_transcript MGP_129S1SvImJ_T0048798.1 MGP_129S1SvImJ_G0024111.1 mouse_genomes_project 17 92119766 92142175 + MGP_129S1SvImJ_P0048798 Ston1 protein_coding protein_coding MGP_129S1SvImJ_T0048799.1 MGP_129S1SvImJ_G0024111.1 mouse_genomes_project 17 92119766 92139230 + MGP_129S1SvImJ_P0048799 Ston1 protein_coding protein_coding MGP_129S1SvImJ_T0048800.1 MGP_129S1SvImJ_G0024111.1 mouse_genomes_project 17 92119820 92156055 + MGP_129S1SvImJ_P0048800 Ston1 protein_coding protein_coding MGP_129S1SvImJ_T0048801.1 MGP_129S1SvImJ_G0024111.1 mouse_genomes_project 17 92120044 92130743 + Ston1 protein_coding retained_intron MGP_129S1SvImJ_T0048802.1 MGP_129S1SvImJ_G0024111.1 mouse_genomes_project 17 92120575 92130842 + Ston1 protein_coding retained_intron MGP_129S1SvImJ_T0047968.1 MGP_129S1SvImJ_G0023821.1 mouse_genomes_project 17 47629260 47705259 - MGP_129S1SvImJ_P0047968 Ptk7 protein_coding protein_coding MGP_129S1SvImJ_T0045460.1 MGP_129S1SvImJ_G0023120.1 mouse_genomes_project 17 4982907 5049334 - MGP_129S1SvImJ_P0045460 Fndc1 protein_coding protein_coding MGP_129S1SvImJ_T0045461.1 MGP_129S1SvImJ_G0023120.1 mouse_genomes_project 17 4990599 5004958 - Fndc1 protein_coding processed_transcript MGP_129S1SvImJ_T0045462.1 MGP_129S1SvImJ_G0023120.1 mouse_genomes_project 17 5005239 5011485 - Fndc1 protein_coding retained_intron MGP_129S1SvImJ_T0045463.1 MGP_129S1SvImJ_G0023120.1 mouse_genomes_project 17 5026008 5072244 - MGP_129S1SvImJ_P0045463 Fndc1 protein_coding protein_coding MGP_129S1SvImJ_T0045464.1 MGP_129S1SvImJ_G0023120.1 mouse_genomes_project 17 5043601 5072244 - MGP_129S1SvImJ_P0045464 Fndc1 protein_coding protein_coding MGP_129S1SvImJ_T0003741.1 MGP_129S1SvImJ_G0003372.1 mouse_genomes_project 17 11521469 11522085 - Gm16052 antisense antisense MGP_129S1SvImJ_T0102310.1 MGP_129S1SvImJ_G0040144.1 mouse_genomes_project 17 25447732 25448431 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0046279.1 MGP_129S1SvImJ_G0023380.1 mouse_genomes_project 17 24985385 24988061 - MGP_129S1SvImJ_P0046279 Wfikkn1 protein_coding protein_coding MGP_129S1SvImJ_T0046280.1 MGP_129S1SvImJ_G0023380.1 mouse_genomes_project 17 24986559 24987992 - MGP_129S1SvImJ_P0046280 Wfikkn1 protein_coding protein_coding MGP_129S1SvImJ_T0048673.1 MGP_129S1SvImJ_G0024067.1 mouse_genomes_project 17 83909783 83977579 + MGP_129S1SvImJ_P0048673 Tmem178 protein_coding protein_coding MGP_129S1SvImJ_T0046739.1 MGP_129S1SvImJ_G0023489.1 mouse_genomes_project 17 31273135 31293173 - MGP_129S1SvImJ_P0046739 Wdr4 protein_coding protein_coding MGP_129S1SvImJ_T0046740.1 MGP_129S1SvImJ_G0023489.1 mouse_genomes_project 17 31273136 31293186 - MGP_129S1SvImJ_P0046740 Wdr4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046741.1 MGP_129S1SvImJ_G0023489.1 mouse_genomes_project 17 31273136 31293669 - MGP_129S1SvImJ_P0046741 Wdr4 protein_coding protein_coding MGP_129S1SvImJ_T0046742.1 MGP_129S1SvImJ_G0023489.1 mouse_genomes_project 17 31273138 31293186 - MGP_129S1SvImJ_P0046742 Wdr4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046743.1 MGP_129S1SvImJ_G0023489.1 mouse_genomes_project 17 31274939 31280112 - Wdr4 protein_coding retained_intron MGP_129S1SvImJ_T0046744.1 MGP_129S1SvImJ_G0023489.1 mouse_genomes_project 17 31278261 31282398 - Wdr4 protein_coding retained_intron MGP_129S1SvImJ_T0046745.1 MGP_129S1SvImJ_G0023489.1 mouse_genomes_project 17 31281867 31290830 - Wdr4 protein_coding retained_intron MGP_129S1SvImJ_T0046746.1 MGP_129S1SvImJ_G0023489.1 mouse_genomes_project 17 31282355 31300823 - MGP_129S1SvImJ_P0046746 Wdr4 protein_coding protein_coding MGP_129S1SvImJ_T0046747.1 MGP_129S1SvImJ_G0023489.1 mouse_genomes_project 17 31282365 31293196 - MGP_129S1SvImJ_P0046747 Wdr4 protein_coding protein_coding MGP_129S1SvImJ_T0046748.1 MGP_129S1SvImJ_G0023489.1 mouse_genomes_project 17 31293360 31300883 - Wdr4 protein_coding processed_transcript MGP_129S1SvImJ_T0047353.1 MGP_129S1SvImJ_G0023622.1 mouse_genomes_project 17 35272181 35275235 - MGP_129S1SvImJ_P0047353 Apom protein_coding protein_coding MGP_129S1SvImJ_T0048172.1 MGP_129S1SvImJ_G0023881.1 mouse_genomes_project 17 51691159 51705355 - MGP_129S1SvImJ_P0048172 Dazl protein_coding protein_coding MGP_129S1SvImJ_T0048173.1 MGP_129S1SvImJ_G0023881.1 mouse_genomes_project 17 51693011 51704700 - MGP_129S1SvImJ_P0048173 Dazl protein_coding unknown_likely_coding MGP_129S1SvImJ_T0046407.1 MGP_129S1SvImJ_G0023411.1 mouse_genomes_project 17 26162408 26163904 - MGP_129S1SvImJ_P0046407 Cuta protein_coding protein_coding MGP_129S1SvImJ_T0046408.1 MGP_129S1SvImJ_G0023411.1 mouse_genomes_project 17 26162408 26163914 - MGP_129S1SvImJ_P0046408 Cuta protein_coding protein_coding MGP_129S1SvImJ_T0046623.1 MGP_129S1SvImJ_G0023457.1 mouse_genomes_project 17 28595125 28603642 + MGP_129S1SvImJ_P0046623 Cdkn1a protein_coding protein_coding MGP_129S1SvImJ_T0046624.1 MGP_129S1SvImJ_G0023457.1 mouse_genomes_project 17 28597918 28604828 + MGP_129S1SvImJ_P0046624 Cdkn1a protein_coding protein_coding MGP_129S1SvImJ_T0046625.1 MGP_129S1SvImJ_G0023457.1 mouse_genomes_project 17 28602321 28603684 + MGP_129S1SvImJ_P0046625 Cdkn1a protein_coding protein_coding MGP_129S1SvImJ_T0047262.1 MGP_129S1SvImJ_G0023600.1 mouse_genomes_project 17 35080220 35101886 - MGP_129S1SvImJ_P0047262 Hspa1b protein_coding protein_coding MGP_129S1SvImJ_T0048742.1 MGP_129S1SvImJ_G0024097.1 mouse_genomes_project 17 90350020 90376414 - MGP_129S1SvImJ_P0048742 Pigf protein_coding protein_coding MGP_129S1SvImJ_T0099575.1 MGP_129S1SvImJ_G0037642.1 mouse_genomes_project 17 78791214 78791320 + Gm24126 snRNA snRNA MGP_129S1SvImJ_T0046776.1 MGP_129S1SvImJ_G0023497.1 mouse_genomes_project 17 31850781 31877548 + MGP_129S1SvImJ_P0046776 Rrp1b protein_coding protein_coding MGP_129S1SvImJ_T0046777.1 MGP_129S1SvImJ_G0023497.1 mouse_genomes_project 17 31851084 31862605 + Rrp1b protein_coding retained_intron MGP_129S1SvImJ_T0046778.1 MGP_129S1SvImJ_G0023497.1 mouse_genomes_project 17 31851110 31862598 + MGP_129S1SvImJ_P0046778 Rrp1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046779.1 MGP_129S1SvImJ_G0023497.1 mouse_genomes_project 17 31862967 31877539 + Rrp1b protein_coding retained_intron MGP_129S1SvImJ_T0046780.1 MGP_129S1SvImJ_G0023497.1 mouse_genomes_project 17 31863489 31866483 + Rrp1b protein_coding retained_intron MGP_129S1SvImJ_T0046781.1 MGP_129S1SvImJ_G0023497.1 mouse_genomes_project 17 31864701 31866362 + Rrp1b protein_coding retained_intron MGP_129S1SvImJ_T0046782.1 MGP_129S1SvImJ_G0023497.1 mouse_genomes_project 17 31866486 31871285 + MGP_129S1SvImJ_P0046782 Rrp1b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046783.1 MGP_129S1SvImJ_G0023497.1 mouse_genomes_project 17 31866954 31871298 + Rrp1b protein_coding retained_intron MGP_129S1SvImJ_T0046784.1 MGP_129S1SvImJ_G0023497.1 mouse_genomes_project 17 31870601 31871714 + Rrp1b protein_coding processed_transcript MGP_129S1SvImJ_T0046785.1 MGP_129S1SvImJ_G0023497.1 mouse_genomes_project 17 31872971 31875256 + Rrp1b protein_coding retained_intron MGP_129S1SvImJ_T0046786.1 MGP_129S1SvImJ_G0023497.1 mouse_genomes_project 17 31873850 31875349 + Rrp1b protein_coding retained_intron MGP_129S1SvImJ_T0047328.1 MGP_129S1SvImJ_G0023616.1 mouse_genomes_project 17 35230490 35233057 + Abhd16a protein_coding retained_intron MGP_129S1SvImJ_T0047329.1 MGP_129S1SvImJ_G0023616.1 mouse_genomes_project 17 35230518 35244216 + MGP_129S1SvImJ_P0047329 Abhd16a protein_coding protein_coding MGP_129S1SvImJ_T0047330.1 MGP_129S1SvImJ_G0023616.1 mouse_genomes_project 17 35230541 35244185 + MGP_129S1SvImJ_P0047330 Abhd16a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047331.1 MGP_129S1SvImJ_G0023616.1 mouse_genomes_project 17 35231097 35233197 + Abhd16a protein_coding retained_intron MGP_129S1SvImJ_T0047332.1 MGP_129S1SvImJ_G0023616.1 mouse_genomes_project 17 35237580 35242169 + Abhd16a protein_coding processed_transcript MGP_129S1SvImJ_T0047333.1 MGP_129S1SvImJ_G0023616.1 mouse_genomes_project 17 35241159 35241924 + Abhd16a protein_coding retained_intron MGP_129S1SvImJ_T0047334.1 MGP_129S1SvImJ_G0023616.1 mouse_genomes_project 17 35242082 35243259 + Abhd16a protein_coding retained_intron MGP_129S1SvImJ_T0045704.1 MGP_129S1SvImJ_G0023203.1 mouse_genomes_project 17 18839079 18857033 - MGP_129S1SvImJ_P0045704 protein_coding protein_coding MGP_129S1SvImJ_T0003773.1 MGP_129S1SvImJ_G0003396.1 mouse_genomes_project 17 35107702 35112592 - Gm10501 antisense antisense MGP_129S1SvImJ_T0003765.1 MGP_129S1SvImJ_G0003391.1 mouse_genomes_project 17 33857593 33858621 - BC051226 antisense antisense MGP_129S1SvImJ_T0003766.1 MGP_129S1SvImJ_G0003391.1 mouse_genomes_project 17 33857596 33858590 - BC051226 antisense antisense MGP_129S1SvImJ_T0003767.1 MGP_129S1SvImJ_G0003391.1 mouse_genomes_project 17 33857705 33858729 - BC051226 antisense antisense MGP_129S1SvImJ_T0102295.1 MGP_129S1SvImJ_G0040129.1 mouse_genomes_project 17 19126459 19127063 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0045766.1 MGP_129S1SvImJ_G0023245.1 mouse_genomes_project 17 21169507 21195855 - MGP_129S1SvImJ_P0045766 Zfp944 protein_coding protein_coding MGP_129S1SvImJ_T0048333.1 MGP_129S1SvImJ_G0023950.1 mouse_genomes_project 17 58780293 58787640 - MGP_129S1SvImJ_P0048333 Slc25a41 protein_coding protein_coding MGP_129S1SvImJ_T0048334.1 MGP_129S1SvImJ_G0023950.1 mouse_genomes_project 17 58780445 58788938 - MGP_129S1SvImJ_P0048334 Slc25a41 protein_coding protein_coding MGP_129S1SvImJ_T0046245.1 MGP_129S1SvImJ_G0023376.1 mouse_genomes_project 17 24935789 24942178 - MGP_129S1SvImJ_P0046245 Rhot2 protein_coding protein_coding MGP_129S1SvImJ_T0046246.1 MGP_129S1SvImJ_G0023376.1 mouse_genomes_project 17 24936170 24938481 - Rhot2 protein_coding retained_intron MGP_129S1SvImJ_T0046247.1 MGP_129S1SvImJ_G0023376.1 mouse_genomes_project 17 24936172 24941790 - Rhot2 protein_coding retained_intron MGP_129S1SvImJ_T0046248.1 MGP_129S1SvImJ_G0023376.1 mouse_genomes_project 17 24936606 24937932 - Rhot2 protein_coding retained_intron MGP_129S1SvImJ_T0046249.1 MGP_129S1SvImJ_G0023376.1 mouse_genomes_project 17 24937386 24938995 - Rhot2 protein_coding processed_transcript MGP_129S1SvImJ_T0046250.1 MGP_129S1SvImJ_G0023376.1 mouse_genomes_project 17 24938588 24939387 - Rhot2 protein_coding retained_intron MGP_129S1SvImJ_T0046251.1 MGP_129S1SvImJ_G0023376.1 mouse_genomes_project 17 24938669 24940470 - Rhot2 protein_coding retained_intron MGP_129S1SvImJ_T0046252.1 MGP_129S1SvImJ_G0023376.1 mouse_genomes_project 17 24938718 24939439 - Rhot2 protein_coding retained_intron MGP_129S1SvImJ_T0046253.1 MGP_129S1SvImJ_G0023376.1 mouse_genomes_project 17 24938892 24941633 - Rhot2 protein_coding retained_intron MGP_129S1SvImJ_T0046254.1 MGP_129S1SvImJ_G0023376.1 mouse_genomes_project 17 24938900 24940476 - Rhot2 protein_coding retained_intron MGP_129S1SvImJ_T0046255.1 MGP_129S1SvImJ_G0023376.1 mouse_genomes_project 17 24938937 24941645 - Rhot2 protein_coding retained_intron MGP_129S1SvImJ_T0046256.1 MGP_129S1SvImJ_G0023376.1 mouse_genomes_project 17 24939092 24941744 - MGP_129S1SvImJ_P0046256 Rhot2 protein_coding protein_coding MGP_129S1SvImJ_T0046257.1 MGP_129S1SvImJ_G0023376.1 mouse_genomes_project 17 24939428 24941773 - Rhot2 protein_coding retained_intron MGP_129S1SvImJ_T0046258.1 MGP_129S1SvImJ_G0023376.1 mouse_genomes_project 17 24939584 24941852 - MGP_129S1SvImJ_P0046258 Rhot2 protein_coding protein_coding MGP_129S1SvImJ_T0046259.1 MGP_129S1SvImJ_G0023376.1 mouse_genomes_project 17 24939588 24941896 - Rhot2 protein_coding processed_transcript MGP_129S1SvImJ_T0046260.1 MGP_129S1SvImJ_G0023376.1 mouse_genomes_project 17 24939714 24941869 - Rhot2 protein_coding processed_transcript MGP_129S1SvImJ_T0046261.1 MGP_129S1SvImJ_G0023376.1 mouse_genomes_project 17 24941101 24941857 - Rhot2 protein_coding retained_intron MGP_129S1SvImJ_T0045740.1 MGP_129S1SvImJ_G0023230.1 mouse_genomes_project 17 20228293 20247409 + MGP_129S1SvImJ_P0045740 Zfp53 protein_coding protein_coding MGP_129S1SvImJ_T0102303.1 MGP_129S1SvImJ_G0040137.1 mouse_genomes_project 17 21782478 21801926 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0046991.1 MGP_129S1SvImJ_G0023546.1 mouse_genomes_project 17 33890065 33899101 + MGP_129S1SvImJ_P0046991 Wdr46 protein_coding protein_coding MGP_129S1SvImJ_T0046992.1 MGP_129S1SvImJ_G0023546.1 mouse_genomes_project 17 33890122 33890866 + Wdr46 protein_coding retained_intron MGP_129S1SvImJ_T0046993.1 MGP_129S1SvImJ_G0023546.1 mouse_genomes_project 17 33890810 33893084 + Wdr46 protein_coding retained_intron MGP_129S1SvImJ_T0013277.1 MGP_129S1SvImJ_G0011366.1 mouse_genomes_project 17 39007444 39008125 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0047985.1 MGP_129S1SvImJ_G0023828.1 mouse_genomes_project 17 47763828 47790601 - MGP_129S1SvImJ_P0047985 Ppp2r5d protein_coding protein_coding MGP_129S1SvImJ_T0047499.1 MGP_129S1SvImJ_G0023657.1 mouse_genomes_project 17 36065554 36078485 + MGP_129S1SvImJ_P0047499 Ppp1r18 protein_coding protein_coding MGP_129S1SvImJ_T0047500.1 MGP_129S1SvImJ_G0023657.1 mouse_genomes_project 17 36065586 36078386 + MGP_129S1SvImJ_P0047500 Ppp1r18 protein_coding protein_coding MGP_129S1SvImJ_T0047501.1 MGP_129S1SvImJ_G0023657.1 mouse_genomes_project 17 36066017 36078490 + MGP_129S1SvImJ_P0047501 Ppp1r18 protein_coding protein_coding MGP_129S1SvImJ_T0047502.1 MGP_129S1SvImJ_G0023657.1 mouse_genomes_project 17 36066576 36078490 + MGP_129S1SvImJ_P0047502 Ppp1r18 protein_coding protein_coding MGP_129S1SvImJ_T0047503.1 MGP_129S1SvImJ_G0023657.1 mouse_genomes_project 17 36066621 36078481 + MGP_129S1SvImJ_P0047503 Ppp1r18 protein_coding protein_coding MGP_129S1SvImJ_T0047504.1 MGP_129S1SvImJ_G0023657.1 mouse_genomes_project 17 36068364 36078488 + MGP_129S1SvImJ_P0047504 Ppp1r18 protein_coding protein_coding MGP_129S1SvImJ_T0047188.1 MGP_129S1SvImJ_G0023588.1 mouse_genomes_project 17 34843227 34935640 - Stk19 protein_coding processed_transcript MGP_129S1SvImJ_T0047191.1 MGP_129S1SvImJ_G0023588.1 mouse_genomes_project 17 34934194 34948771 - MGP_129S1SvImJ_P0047191 Stk19 protein_coding protein_coding MGP_129S1SvImJ_T0047192.1 MGP_129S1SvImJ_G0023588.1 mouse_genomes_project 17 34934196 34936321 - Stk19 protein_coding retained_intron MGP_129S1SvImJ_T0047193.1 MGP_129S1SvImJ_G0023588.1 mouse_genomes_project 17 34941638 34948753 - Stk19 protein_coding retained_intron MGP_129S1SvImJ_T0047194.1 MGP_129S1SvImJ_G0023588.1 mouse_genomes_project 17 34944280 34948580 - Stk19 protein_coding retained_intron MGP_129S1SvImJ_T0099561.1 MGP_129S1SvImJ_G0037628.1 mouse_genomes_project 17 41731624 41731772 - Gm23078 snRNA snRNA MGP_129S1SvImJ_T0047693.1 MGP_129S1SvImJ_G0023714.1 mouse_genomes_project 17 37887792 37890488 - MGP_129S1SvImJ_P0047693 H2-M2 protein_coding protein_coding MGP_129S1SvImJ_T0047694.1 MGP_129S1SvImJ_G0023714.1 mouse_genomes_project 17 37887932 37890489 - MGP_129S1SvImJ_P0047694 H2-M2 protein_coding protein_coding MGP_129S1SvImJ_T0048493.1 MGP_129S1SvImJ_G0024002.1 mouse_genomes_project 17 73398242 73415942 - MGP_129S1SvImJ_P0048493 Myl12b protein_coding protein_coding MGP_129S1SvImJ_T0048494.1 MGP_129S1SvImJ_G0024002.1 mouse_genomes_project 17 73398594 73400290 - Myl12b protein_coding retained_intron MGP_129S1SvImJ_T0048495.1 MGP_129S1SvImJ_G0024002.1 mouse_genomes_project 17 73401255 73415685 - Myl12b protein_coding retained_intron MGP_129S1SvImJ_T0010242.1 MGP_129S1SvImJ_G0008358.1 mouse_genomes_project 17 69273619 69273708 - Mir5709 miRNA miRNA MGP_129S1SvImJ_T0046370.1 MGP_129S1SvImJ_G0023399.1 mouse_genomes_project 17 25447667 25448555 - MGP_129S1SvImJ_P0046370 protein_coding protein_coding MGP_129S1SvImJ_T0047189.1 MGP_129S1SvImJ_G0023589.1 mouse_genomes_project 17 34905164 34908344 - MGP_129S1SvImJ_P0047189 Cyp21a1 protein_coding protein_coding MGP_129S1SvImJ_T0047190.1 MGP_129S1SvImJ_G0023589.1 mouse_genomes_project 17 34906013 34907184 - Cyp21a1 protein_coding retained_intron MGP_129S1SvImJ_T0045500.1 MGP_129S1SvImJ_G0023133.1 mouse_genomes_project 17 5782429 5798698 + MGP_129S1SvImJ_P0045500 protein_coding protein_coding MGP_129S1SvImJ_T0102329.1 MGP_129S1SvImJ_G0040163.1 mouse_genomes_project 17 35516577 35517561 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0101647.1 MGP_129S1SvImJ_G0039679.1 mouse_genomes_project 17 25009554 25009926 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101648.1 MGP_129S1SvImJ_G0039679.1 mouse_genomes_project 17 25009560 25009752 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0045732.1 MGP_129S1SvImJ_G0023225.1 mouse_genomes_project 17 20035438 20036559 + MGP_129S1SvImJ_P0045732 Vmn1r236 protein_coding protein_coding MGP_129S1SvImJ_T0017569.1 MGP_129S1SvImJ_G0015335.1 mouse_genomes_project 17 5838623 5896825 + T2 processed_transcript processed_transcript MGP_129S1SvImJ_T0017570.1 MGP_129S1SvImJ_G0015335.1 mouse_genomes_project 17 5866433 5896825 + T2 processed_transcript processed_transcript MGP_129S1SvImJ_T0045716.1 MGP_129S1SvImJ_G0023215.1 mouse_genomes_project 17 19515767 19516688 + MGP_129S1SvImJ_P0045716 Vmn1r229 protein_coding protein_coding MGP_129S1SvImJ_T0048393.1 MGP_129S1SvImJ_G0023975.1 mouse_genomes_project 17 66928471 66932035 - MGP_129S1SvImJ_P0048393 4930583I09Rik protein_coding protein_coding MGP_129S1SvImJ_T0047681.1 MGP_129S1SvImJ_G0023703.1 mouse_genomes_project 17 37601750 37602801 + MGP_129S1SvImJ_P0047681 Olfr96 protein_coding protein_coding MGP_129S1SvImJ_T0003735.1 MGP_129S1SvImJ_G0003371.1 mouse_genomes_project 17 10405513 10527068 + antisense antisense MGP_129S1SvImJ_T0003736.1 MGP_129S1SvImJ_G0003371.1 mouse_genomes_project 17 10405532 10494405 + antisense antisense MGP_129S1SvImJ_T0003737.1 MGP_129S1SvImJ_G0003371.1 mouse_genomes_project 17 10405576 10479161 + antisense antisense MGP_129S1SvImJ_T0003738.1 MGP_129S1SvImJ_G0003371.1 mouse_genomes_project 17 10405587 10478321 + antisense antisense MGP_129S1SvImJ_T0003739.1 MGP_129S1SvImJ_G0003371.1 mouse_genomes_project 17 10405600 10494306 + antisense antisense MGP_129S1SvImJ_T0003740.1 MGP_129S1SvImJ_G0003371.1 mouse_genomes_project 17 10479534 10494490 + antisense antisense MGP_129S1SvImJ_T0048059.1 MGP_129S1SvImJ_G0023854.1 mouse_genomes_project 17 48898330 48901287 - MGP_129S1SvImJ_P0048059 Prickle4 protein_coding protein_coding MGP_129S1SvImJ_T0048060.1 MGP_129S1SvImJ_G0023854.1 mouse_genomes_project 17 48898330 48902277 - MGP_129S1SvImJ_P0048060 Prickle4 protein_coding protein_coding MGP_129S1SvImJ_T0048061.1 MGP_129S1SvImJ_G0023854.1 mouse_genomes_project 17 48898432 48900707 - Prickle4 protein_coding retained_intron MGP_129S1SvImJ_T0048063.1 MGP_129S1SvImJ_G0023854.1 mouse_genomes_project 17 48899391 48901214 - MGP_129S1SvImJ_P0048063 Prickle4 protein_coding protein_coding MGP_129S1SvImJ_T0048064.1 MGP_129S1SvImJ_G0023854.1 mouse_genomes_project 17 48902026 48904538 - Prickle4 protein_coding retained_intron MGP_129S1SvImJ_T0047259.1 MGP_129S1SvImJ_G0023599.1 mouse_genomes_project 17 35054707 35059376 + MGP_129S1SvImJ_P0047259 Neu1 protein_coding protein_coding MGP_129S1SvImJ_T0047260.1 MGP_129S1SvImJ_G0023599.1 mouse_genomes_project 17 35054768 35059403 + Neu1 protein_coding retained_intron MGP_129S1SvImJ_T0047261.1 MGP_129S1SvImJ_G0023599.1 mouse_genomes_project 17 35055317 35056220 + Neu1 protein_coding retained_intron MGP_129S1SvImJ_T0046957.1 MGP_129S1SvImJ_G0023541.1 mouse_genomes_project 17 33858825 33860835 + MGP_129S1SvImJ_P0046957 Daxx protein_coding protein_coding MGP_129S1SvImJ_T0046958.1 MGP_129S1SvImJ_G0023541.1 mouse_genomes_project 17 33858856 33864855 + MGP_129S1SvImJ_P0046958 Daxx protein_coding protein_coding MGP_129S1SvImJ_T0046959.1 MGP_129S1SvImJ_G0023541.1 mouse_genomes_project 17 33858909 33860924 + MGP_129S1SvImJ_P0046959 Daxx protein_coding protein_coding MGP_129S1SvImJ_T0046960.1 MGP_129S1SvImJ_G0023541.1 mouse_genomes_project 17 33858926 33864784 + MGP_129S1SvImJ_P0046960 Daxx protein_coding protein_coding MGP_129S1SvImJ_T0046961.1 MGP_129S1SvImJ_G0023541.1 mouse_genomes_project 17 33859012 33864848 + MGP_129S1SvImJ_P0046961 Daxx protein_coding protein_coding MGP_129S1SvImJ_T0046962.1 MGP_129S1SvImJ_G0023541.1 mouse_genomes_project 17 33859688 33861309 + Daxx protein_coding retained_intron MGP_129S1SvImJ_T0046963.1 MGP_129S1SvImJ_G0023541.1 mouse_genomes_project 17 33859837 33864848 + MGP_129S1SvImJ_P0046963 Daxx protein_coding protein_coding MGP_129S1SvImJ_T0046964.1 MGP_129S1SvImJ_G0023541.1 mouse_genomes_project 17 33862161 33863265 + Daxx protein_coding processed_transcript MGP_129S1SvImJ_T0046965.1 MGP_129S1SvImJ_G0023541.1 mouse_genomes_project 17 33862824 33864784 + Daxx protein_coding processed_transcript MGP_129S1SvImJ_T0001018.1 MGP_129S1SvImJ_G0000947.1 mouse_genomes_project 17 53340673 53344734 + TEC TEC MGP_129S1SvImJ_T0006991.1 MGP_129S1SvImJ_G0005752.1 mouse_genomes_project 17 73294028 73839857 + lincRNA lincRNA MGP_129S1SvImJ_T0048492.1 MGP_129S1SvImJ_G0024001.1 mouse_genomes_project 17 73346647 73347139 + MGP_129S1SvImJ_P0048492 Gm16519 protein_coding protein_coding MGP_129S1SvImJ_T0047584.1 MGP_129S1SvImJ_G0023672.1 mouse_genomes_project 17 36609902 36612113 - MGP_129S1SvImJ_P0047584 Rpp21 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047585.1 MGP_129S1SvImJ_G0023672.1 mouse_genomes_project 17 36609924 36612100 - Rpp21 protein_coding retained_intron MGP_129S1SvImJ_T0047586.1 MGP_129S1SvImJ_G0023672.1 mouse_genomes_project 17 36609924 36612322 - MGP_129S1SvImJ_P0047586 Rpp21 protein_coding protein_coding MGP_129S1SvImJ_T0047587.1 MGP_129S1SvImJ_G0023672.1 mouse_genomes_project 17 36609930 36610610 - Rpp21 protein_coding retained_intron MGP_129S1SvImJ_T0047588.1 MGP_129S1SvImJ_G0023672.1 mouse_genomes_project 17 36609969 36611867 - MGP_129S1SvImJ_P0047588 Rpp21 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047589.1 MGP_129S1SvImJ_G0023672.1 mouse_genomes_project 17 36610201 36612112 - Rpp21 protein_coding retained_intron MGP_129S1SvImJ_T0017571.1 MGP_129S1SvImJ_G0015336.1 mouse_genomes_project 17 8413340 8432933 + Gm16169 processed_transcript antisense MGP_129S1SvImJ_T0017572.1 MGP_129S1SvImJ_G0015336.1 mouse_genomes_project 17 8413345 8422085 + Gm16169 processed_transcript retained_intron MGP_129S1SvImJ_T0046273.1 MGP_129S1SvImJ_G0023378.1 mouse_genomes_project 17 24961057 24968806 - MGP_129S1SvImJ_P0046273 Fam195a protein_coding protein_coding MGP_129S1SvImJ_T0010213.1 MGP_129S1SvImJ_G0008329.1 mouse_genomes_project 17 27983309 27983370 - Mir6969 miRNA miRNA MGP_129S1SvImJ_T0046571.1 MGP_129S1SvImJ_G0023447.1 mouse_genomes_project 17 28075583 28135457 - MGP_129S1SvImJ_P0046571 Slc26a8 protein_coding protein_coding MGP_129S1SvImJ_T0046572.1 MGP_129S1SvImJ_G0023447.1 mouse_genomes_project 17 28091406 28135457 - Slc26a8 protein_coding retained_intron MGP_129S1SvImJ_T0001009.1 MGP_129S1SvImJ_G0000938.1 mouse_genomes_project 17 51618497 51619515 + TEC TEC MGP_129S1SvImJ_T0045746.1 MGP_129S1SvImJ_G0023236.1 mouse_genomes_project 17 20454694 20472595 + MGP_129S1SvImJ_P0045746 Zfp760 protein_coding protein_coding MGP_129S1SvImJ_T0045396.1 MGP_129S1SvImJ_G0023098.1 mouse_genomes_project 17 292279 494389 + MGP_129S1SvImJ_P0045396 Tiam2 protein_coding protein_coding MGP_129S1SvImJ_T0045397.1 MGP_129S1SvImJ_G0023098.1 mouse_genomes_project 17 365757 494389 + MGP_129S1SvImJ_P0045397 Tiam2 protein_coding protein_coding MGP_129S1SvImJ_T0045398.1 MGP_129S1SvImJ_G0023098.1 mouse_genomes_project 17 454251 493720 + MGP_129S1SvImJ_P0045398 Tiam2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0100833.1 MGP_129S1SvImJ_G0038900.1 mouse_genomes_project 17 64464655 64464789 - Gm25800 snoRNA snoRNA MGP_129S1SvImJ_T0013305.1 MGP_129S1SvImJ_G0011394.1 mouse_genomes_project 17 77866008 77866586 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101868.1 MGP_129S1SvImJ_G0039804.1 mouse_genomes_project 17 31892593 31908853 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101869.1 MGP_129S1SvImJ_G0039804.1 mouse_genomes_project 17 31893011 31917723 - transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101870.1 MGP_129S1SvImJ_G0039804.1 mouse_genomes_project 17 31895259 31926089 - transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0003744.1 MGP_129S1SvImJ_G0003375.1 mouse_genomes_project 17 22787613 22793068 - Gm15947 antisense antisense MGP_129S1SvImJ_T0048110.1 MGP_129S1SvImJ_G0023866.1 mouse_genomes_project 17 49535217 49546817 + MGP_129S1SvImJ_P0048110 Treml4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048111.1 MGP_129S1SvImJ_G0023866.1 mouse_genomes_project 17 49535785 49545948 + MGP_129S1SvImJ_P0048111 Treml4 protein_coding protein_coding MGP_129S1SvImJ_T0048112.1 MGP_129S1SvImJ_G0023866.1 mouse_genomes_project 17 49535785 49545948 + MGP_129S1SvImJ_P0048112 Treml4 protein_coding protein_coding MGP_129S1SvImJ_T0048113.1 MGP_129S1SvImJ_G0023866.1 mouse_genomes_project 17 49535789 49546121 + MGP_129S1SvImJ_P0048113 Treml4 protein_coding protein_coding MGP_129S1SvImJ_T0048114.1 MGP_129S1SvImJ_G0023866.1 mouse_genomes_project 17 49535821 49545955 + MGP_129S1SvImJ_P0048114 Treml4 protein_coding protein_coding MGP_129S1SvImJ_T0048115.1 MGP_129S1SvImJ_G0023866.1 mouse_genomes_project 17 49543889 49545967 + Treml4 protein_coding retained_intron MGP_129S1SvImJ_T0013293.1 MGP_129S1SvImJ_G0011382.1 mouse_genomes_project 17 56034035 56034176 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0045767.1 MGP_129S1SvImJ_G0023246.1 mouse_genomes_project 17 21195908 21212099 + MGP_129S1SvImJ_P0045767 Zfp758 protein_coding protein_coding MGP_129S1SvImJ_T0045768.1 MGP_129S1SvImJ_G0023246.1 mouse_genomes_project 17 21195908 21212098 + MGP_129S1SvImJ_P0045768 Zfp758 protein_coding protein_coding MGP_129S1SvImJ_T0045769.1 MGP_129S1SvImJ_G0023246.1 mouse_genomes_project 17 21195910 21211074 + MGP_129S1SvImJ_P0045769 Zfp758 protein_coding protein_coding MGP_129S1SvImJ_T0045770.1 MGP_129S1SvImJ_G0023246.1 mouse_genomes_project 17 21195977 21212099 + MGP_129S1SvImJ_P0045770 Zfp758 protein_coding protein_coding MGP_129S1SvImJ_T0011448.1 MGP_129S1SvImJ_G0009564.1 mouse_genomes_project 17 44889352 44889638 - Gm24532 misc_RNA misc_RNA MGP_129S1SvImJ_T0047629.1 MGP_129S1SvImJ_G0023688.1 mouse_genomes_project 17 37304338 37307695 - MGP_129S1SvImJ_P0047629 Ppp1r11 protein_coding protein_coding MGP_129S1SvImJ_T0047630.1 MGP_129S1SvImJ_G0023688.1 mouse_genomes_project 17 37305271 37307723 - MGP_129S1SvImJ_P0047630 Ppp1r11 protein_coding protein_coding MGP_129S1SvImJ_T0047631.1 MGP_129S1SvImJ_G0023688.1 mouse_genomes_project 17 37305336 37307320 - MGP_129S1SvImJ_P0047631 Ppp1r11 protein_coding protein_coding MGP_129S1SvImJ_T0013303.1 MGP_129S1SvImJ_G0011392.1 mouse_genomes_project 17 75747553 75748983 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048671.1 MGP_129S1SvImJ_G0024066.1 mouse_genomes_project 17 83522015 83674374 - MGP_129S1SvImJ_P0048671 Map4k3 protein_coding protein_coding MGP_129S1SvImJ_T0048672.1 MGP_129S1SvImJ_G0024066.1 mouse_genomes_project 17 83522015 83674374 - MGP_129S1SvImJ_P0048672 Map4k3 protein_coding protein_coding MGP_129S1SvImJ_T0046242.1 MGP_129S1SvImJ_G0023375.1 mouse_genomes_project 17 24931797 24934628 - MGP_129S1SvImJ_P0046242 Rhbdl1 protein_coding protein_coding MGP_129S1SvImJ_T0046243.1 MGP_129S1SvImJ_G0023375.1 mouse_genomes_project 17 24931934 24934415 - MGP_129S1SvImJ_P0046243 Rhbdl1 protein_coding protein_coding MGP_129S1SvImJ_T0046244.1 MGP_129S1SvImJ_G0023375.1 mouse_genomes_project 17 24933105 24934584 - MGP_129S1SvImJ_P0046244 Rhbdl1 protein_coding protein_coding MGP_129S1SvImJ_T0046494.1 MGP_129S1SvImJ_G0023433.1 mouse_genomes_project 17 27503327 27539716 + MGP_129S1SvImJ_P0046494 Scube3 protein_coding protein_coding MGP_129S1SvImJ_T0046495.1 MGP_129S1SvImJ_G0023433.1 mouse_genomes_project 17 27515521 27536378 + Scube3 protein_coding processed_transcript MGP_129S1SvImJ_T0046496.1 MGP_129S1SvImJ_G0023433.1 mouse_genomes_project 17 27516678 27535009 + MGP_129S1SvImJ_P0046496 Scube3 protein_coding protein_coding MGP_129S1SvImJ_T0046497.1 MGP_129S1SvImJ_G0023433.1 mouse_genomes_project 17 27525624 27537891 + Scube3 protein_coding processed_transcript MGP_129S1SvImJ_T0046498.1 MGP_129S1SvImJ_G0023433.1 mouse_genomes_project 17 27530672 27532512 + Scube3 protein_coding retained_intron MGP_129S1SvImJ_T0047933.1 MGP_129S1SvImJ_G0023812.1 mouse_genomes_project 17 47351764 47373849 - MGP_129S1SvImJ_P0047933 Abcc10 protein_coding protein_coding MGP_129S1SvImJ_T0047934.1 MGP_129S1SvImJ_G0023812.1 mouse_genomes_project 17 47351773 47373802 - MGP_129S1SvImJ_P0047934 Abcc10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047935.1 MGP_129S1SvImJ_G0023812.1 mouse_genomes_project 17 47351776 47373805 - MGP_129S1SvImJ_P0047935 Abcc10 protein_coding protein_coding MGP_129S1SvImJ_T0047936.1 MGP_129S1SvImJ_G0023812.1 mouse_genomes_project 17 47351964 47371598 - MGP_129S1SvImJ_P0047936 Abcc10 protein_coding protein_coding MGP_129S1SvImJ_T0047937.1 MGP_129S1SvImJ_G0023812.1 mouse_genomes_project 17 47361335 47369464 - MGP_129S1SvImJ_P0047937 Abcc10 protein_coding protein_coding MGP_129S1SvImJ_T0047938.1 MGP_129S1SvImJ_G0023812.1 mouse_genomes_project 17 47368689 47373823 - Abcc10 protein_coding retained_intron MGP_129S1SvImJ_T0047939.1 MGP_129S1SvImJ_G0023812.1 mouse_genomes_project 17 47370388 47374178 - Abcc10 protein_coding processed_transcript MGP_129S1SvImJ_T0047603.1 MGP_129S1SvImJ_G0023679.1 mouse_genomes_project 17 37029280 37031493 - MGP_129S1SvImJ_P0047603 H2-M1 protein_coding protein_coding MGP_129S1SvImJ_T0046029.1 MGP_129S1SvImJ_G0023322.1 mouse_genomes_project 17 23775566 23781237 + MGP_129S1SvImJ_P0046029 Hs3st6 protein_coding protein_coding MGP_129S1SvImJ_T0048094.1 MGP_129S1SvImJ_G0023859.1 mouse_genomes_project 17 49117112 49179274 - MGP_129S1SvImJ_P0048094 Foxp4 protein_coding protein_coding MGP_129S1SvImJ_T0048095.1 MGP_129S1SvImJ_G0023859.1 mouse_genomes_project 17 49117743 49179064 - MGP_129S1SvImJ_P0048095 Foxp4 protein_coding protein_coding MGP_129S1SvImJ_T0048096.1 MGP_129S1SvImJ_G0023859.1 mouse_genomes_project 17 49117743 49179029 - MGP_129S1SvImJ_P0048096 Foxp4 protein_coding protein_coding MGP_129S1SvImJ_T0048097.1 MGP_129S1SvImJ_G0023859.1 mouse_genomes_project 17 49117747 49179105 - MGP_129S1SvImJ_P0048097 Foxp4 protein_coding protein_coding MGP_129S1SvImJ_T0048098.1 MGP_129S1SvImJ_G0023859.1 mouse_genomes_project 17 49128261 49138423 - Foxp4 protein_coding processed_transcript MGP_129S1SvImJ_T0048099.1 MGP_129S1SvImJ_G0023859.1 mouse_genomes_project 17 49128456 49128930 - Foxp4 protein_coding retained_intron MGP_129S1SvImJ_T0048100.1 MGP_129S1SvImJ_G0023859.1 mouse_genomes_project 17 49130316 49138140 - Foxp4 protein_coding retained_intron MGP_129S1SvImJ_T0048101.1 MGP_129S1SvImJ_G0023859.1 mouse_genomes_project 17 49137882 49179055 - Foxp4 protein_coding retained_intron MGP_129S1SvImJ_T0003771.1 MGP_129S1SvImJ_G0003394.1 mouse_genomes_project 17 34202967 34207936 - Gm20496 antisense antisense MGP_129S1SvImJ_T0048218.1 MGP_129S1SvImJ_G0023900.1 mouse_genomes_project 17 57511106 57521895 + MGP_129S1SvImJ_P0048218 Zfp959 protein_coding protein_coding MGP_129S1SvImJ_T0046225.1 MGP_129S1SvImJ_G0023369.1 mouse_genomes_project 17 24890625 24893100 - MGP_129S1SvImJ_P0046225 Metrn protein_coding protein_coding MGP_129S1SvImJ_T0046226.1 MGP_129S1SvImJ_G0023369.1 mouse_genomes_project 17 24891001 24893191 - MGP_129S1SvImJ_P0046226 Metrn protein_coding protein_coding MGP_129S1SvImJ_T0047882.1 MGP_129S1SvImJ_G0023801.1 mouse_genomes_project 17 47152856 47171420 + MGP_129S1SvImJ_P0047882 Mrps18a protein_coding protein_coding MGP_129S1SvImJ_T0047883.1 MGP_129S1SvImJ_G0023801.1 mouse_genomes_project 17 47152865 47165637 + Mrps18a protein_coding retained_intron MGP_129S1SvImJ_T0047884.1 MGP_129S1SvImJ_G0023801.1 mouse_genomes_project 17 47152866 47168375 + MGP_129S1SvImJ_P0047884 Mrps18a protein_coding protein_coding MGP_129S1SvImJ_T0047886.1 MGP_129S1SvImJ_G0023801.1 mouse_genomes_project 17 47165312 47171380 + Mrps18a protein_coding processed_transcript MGP_129S1SvImJ_T0047887.1 MGP_129S1SvImJ_G0023801.1 mouse_genomes_project 17 47167784 47170233 + Mrps18a protein_coding retained_intron MGP_129S1SvImJ_T0047888.1 MGP_129S1SvImJ_G0023801.1 mouse_genomes_project 17 47167967 47171303 + Mrps18a protein_coding retained_intron MGP_129S1SvImJ_T0098737.1 MGP_129S1SvImJ_G0036822.1 mouse_genomes_project 17 5532233 5532321 + Gm22416 scaRNA scaRNA MGP_129S1SvImJ_T0048661.1 MGP_129S1SvImJ_G0024059.1 mouse_genomes_project 17 83134282 83136660 + Gemin6 protein_coding processed_transcript MGP_129S1SvImJ_T0048662.1 MGP_129S1SvImJ_G0024059.1 mouse_genomes_project 17 83134282 83138339 + MGP_129S1SvImJ_P0048662 Gemin6 protein_coding protein_coding MGP_129S1SvImJ_T0047175.1 MGP_129S1SvImJ_G0023584.1 mouse_genomes_project 17 34709503 34713162 + MGP_129S1SvImJ_P0047175 Prrt1 protein_coding protein_coding MGP_129S1SvImJ_T0047176.1 MGP_129S1SvImJ_G0023584.1 mouse_genomes_project 17 34711412 34712433 + Prrt1 protein_coding retained_intron MGP_129S1SvImJ_T0047229.1 MGP_129S1SvImJ_G0023594.1 mouse_genomes_project 17 34968228 34996966 - MGP_129S1SvImJ_P0047229 Gm20547 protein_coding protein_coding MGP_129S1SvImJ_T0047230.1 MGP_129S1SvImJ_G0023594.1 mouse_genomes_project 17 34968242 34984324 - MGP_129S1SvImJ_P0047230 Gm20547 protein_coding protein_coding MGP_129S1SvImJ_T0047335.1 MGP_129S1SvImJ_G0023617.1 mouse_genomes_project 17 35249506 35253159 + MGP_129S1SvImJ_P0047335 Ly6g5c protein_coding protein_coding MGP_129S1SvImJ_T0048196.1 MGP_129S1SvImJ_G0023889.1 mouse_genomes_project 17 55138841 55193893 + Kat2b protein_coding processed_transcript MGP_129S1SvImJ_T0048197.1 MGP_129S1SvImJ_G0023889.1 mouse_genomes_project 17 55138951 55240898 + MGP_129S1SvImJ_P0048197 Kat2b protein_coding protein_coding MGP_129S1SvImJ_T0048198.1 MGP_129S1SvImJ_G0023889.1 mouse_genomes_project 17 55157764 55206527 + MGP_129S1SvImJ_P0048198 Kat2b protein_coding protein_coding MGP_129S1SvImJ_T0048199.1 MGP_129S1SvImJ_G0023889.1 mouse_genomes_project 17 55212816 55240249 + MGP_129S1SvImJ_P0048199 Kat2b protein_coding protein_coding MGP_129S1SvImJ_T0048200.1 MGP_129S1SvImJ_G0023889.1 mouse_genomes_project 17 55227424 55231835 + Kat2b protein_coding retained_intron MGP_129S1SvImJ_T0048201.1 MGP_129S1SvImJ_G0023889.1 mouse_genomes_project 17 55227497 55231860 + Kat2b protein_coding retained_intron MGP_129S1SvImJ_T0048202.1 MGP_129S1SvImJ_G0023889.1 mouse_genomes_project 17 55227581 55238864 + MGP_129S1SvImJ_P0048202 Kat2b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0013257.1 MGP_129S1SvImJ_G0011346.1 mouse_genomes_project 17 36539514 36539700 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048537.1 MGP_129S1SvImJ_G0024011.1 mouse_genomes_project 17 74081152 74127516 + MGP_129S1SvImJ_P0048537 Wdr43 protein_coding protein_coding MGP_129S1SvImJ_T0006914.1 MGP_129S1SvImJ_G0005698.1 mouse_genomes_project 17 21654476 21692460 - Gm16386 lincRNA lincRNA MGP_129S1SvImJ_T0013286.1 MGP_129S1SvImJ_G0011375.1 mouse_genomes_project 17 55315015 55316016 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0047028.1 MGP_129S1SvImJ_G0023554.1 mouse_genomes_project 17 34001250 34007832 + MGP_129S1SvImJ_P0047028 Rxrb protein_coding protein_coding MGP_129S1SvImJ_T0047029.1 MGP_129S1SvImJ_G0023554.1 mouse_genomes_project 17 34001621 34007139 + MGP_129S1SvImJ_P0047029 Rxrb protein_coding protein_coding MGP_129S1SvImJ_T0047030.1 MGP_129S1SvImJ_G0023554.1 mouse_genomes_project 17 34001634 34003641 + MGP_129S1SvImJ_P0047030 Rxrb protein_coding protein_coding MGP_129S1SvImJ_T0047031.1 MGP_129S1SvImJ_G0023554.1 mouse_genomes_project 17 34001813 34007254 + MGP_129S1SvImJ_P0047031 Rxrb protein_coding protein_coding MGP_129S1SvImJ_T0047032.1 MGP_129S1SvImJ_G0023554.1 mouse_genomes_project 17 34001839 34007832 + MGP_129S1SvImJ_P0047032 Rxrb protein_coding protein_coding MGP_129S1SvImJ_T0047033.1 MGP_129S1SvImJ_G0023554.1 mouse_genomes_project 17 34002990 34005449 + Rxrb protein_coding retained_intron MGP_129S1SvImJ_T0047034.1 MGP_129S1SvImJ_G0023554.1 mouse_genomes_project 17 34003346 34005812 + Rxrb protein_coding retained_intron MGP_129S1SvImJ_T0047035.1 MGP_129S1SvImJ_G0023554.1 mouse_genomes_project 17 34005761 34006713 + Rxrb protein_coding retained_intron MGP_129S1SvImJ_T0047036.1 MGP_129S1SvImJ_G0023554.1 mouse_genomes_project 17 34005805 34006746 + Rxrb protein_coding retained_intron MGP_129S1SvImJ_T0047037.1 MGP_129S1SvImJ_G0023554.1 mouse_genomes_project 17 34005901 34006973 + Rxrb protein_coding retained_intron MGP_129S1SvImJ_T0010207.1 MGP_129S1SvImJ_G0008323.1 mouse_genomes_project 17 26340644 26340711 + Mir7677 miRNA miRNA MGP_129S1SvImJ_T0047974.1 MGP_129S1SvImJ_G0023824.1 mouse_genomes_project 17 47727597 47743343 + MGP_129S1SvImJ_P0047974 Cul7 protein_coding protein_coding MGP_129S1SvImJ_T0047975.1 MGP_129S1SvImJ_G0023824.1 mouse_genomes_project 17 47727823 47732102 + Cul7 protein_coding retained_intron MGP_129S1SvImJ_T0047976.1 MGP_129S1SvImJ_G0023824.1 mouse_genomes_project 17 47727832 47736039 + Cul7 protein_coding retained_intron MGP_129S1SvImJ_T0047977.1 MGP_129S1SvImJ_G0023824.1 mouse_genomes_project 17 47728683 47743343 + MGP_129S1SvImJ_P0047977 Cul7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047978.1 MGP_129S1SvImJ_G0023824.1 mouse_genomes_project 17 47730105 47734609 + Cul7 protein_coding processed_transcript MGP_129S1SvImJ_T0047979.1 MGP_129S1SvImJ_G0023824.1 mouse_genomes_project 17 47730147 47743343 + MGP_129S1SvImJ_P0047979 Cul7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047980.1 MGP_129S1SvImJ_G0023824.1 mouse_genomes_project 17 47740739 47743343 + Cul7 protein_coding retained_intron MGP_129S1SvImJ_T0006975.1 MGP_129S1SvImJ_G0005743.1 mouse_genomes_project 17 55418389 55433487 + 4930453H23Rik lincRNA lincRNA MGP_129S1SvImJ_T0006976.1 MGP_129S1SvImJ_G0005743.1 mouse_genomes_project 17 55418491 55421645 + 4930453H23Rik lincRNA lincRNA MGP_129S1SvImJ_T0006977.1 MGP_129S1SvImJ_G0005743.1 mouse_genomes_project 17 55432752 55433010 + 4930453H23Rik lincRNA lincRNA MGP_129S1SvImJ_T0046945.1 MGP_129S1SvImJ_G0023539.1 mouse_genomes_project 17 33764203 33779689 + MGP_129S1SvImJ_P0046945 Ndufa7 protein_coding protein_coding MGP_129S1SvImJ_T0046946.1 MGP_129S1SvImJ_G0023539.1 mouse_genomes_project 17 33764206 33765736 + Ndufa7 protein_coding retained_intron MGP_129S1SvImJ_T0046947.1 MGP_129S1SvImJ_G0023539.1 mouse_genomes_project 17 33764216 33779682 + MGP_129S1SvImJ_P0046947 Ndufa7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046948.1 MGP_129S1SvImJ_G0023539.1 mouse_genomes_project 17 33764257 33765459 + Ndufa7 protein_coding retained_intron MGP_129S1SvImJ_T0046949.1 MGP_129S1SvImJ_G0023539.1 mouse_genomes_project 17 33764657 33779555 + Ndufa7 protein_coding processed_transcript MGP_129S1SvImJ_T0046950.1 MGP_129S1SvImJ_G0023539.1 mouse_genomes_project 17 33765233 33779559 + Ndufa7 protein_coding processed_transcript MGP_129S1SvImJ_T0046951.1 MGP_129S1SvImJ_G0023539.1 mouse_genomes_project 17 33768736 33779682 + Ndufa7 protein_coding processed_transcript MGP_129S1SvImJ_T0046952.1 MGP_129S1SvImJ_G0023539.1 mouse_genomes_project 17 33768971 33779667 + Ndufa7 protein_coding processed_transcript MGP_129S1SvImJ_T0046953.1 MGP_129S1SvImJ_G0023539.1 mouse_genomes_project 17 33769005 33779687 + Ndufa7 protein_coding retained_intron MGP_129S1SvImJ_T0046421.1 MGP_129S1SvImJ_G0023414.1 mouse_genomes_project 17 26204394 26277760 + MGP_129S1SvImJ_P0046421 Ggnbp1 protein_coding protein_coding MGP_129S1SvImJ_T0046422.1 MGP_129S1SvImJ_G0023414.1 mouse_genomes_project 17 26254876 26267307 + Ggnbp1 protein_coding retained_intron MGP_129S1SvImJ_T0046423.1 MGP_129S1SvImJ_G0023414.1 mouse_genomes_project 17 26254887 26277760 + MGP_129S1SvImJ_P0046423 Ggnbp1 protein_coding protein_coding MGP_129S1SvImJ_T0046424.1 MGP_129S1SvImJ_G0023414.1 mouse_genomes_project 17 26254903 26260865 + Ggnbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0046429.1 MGP_129S1SvImJ_G0023414.1 mouse_genomes_project 17 26269766 26277760 + MGP_129S1SvImJ_P0046429 Ggnbp1 protein_coding protein_coding MGP_129S1SvImJ_T0046430.1 MGP_129S1SvImJ_G0023414.1 mouse_genomes_project 17 26270856 26276188 + Ggnbp1 protein_coding retained_intron MGP_129S1SvImJ_T0045416.1 MGP_129S1SvImJ_G0023108.1 mouse_genomes_project 17 3093789 3192544 + MGP_129S1SvImJ_P0045416 Synj2 protein_coding protein_coding MGP_129S1SvImJ_T0045417.1 MGP_129S1SvImJ_G0023108.1 mouse_genomes_project 17 3093789 3198305 + MGP_129S1SvImJ_P0045417 Synj2 protein_coding protein_coding MGP_129S1SvImJ_T0045418.1 MGP_129S1SvImJ_G0023108.1 mouse_genomes_project 17 3093865 3199141 + MGP_129S1SvImJ_P0045418 Synj2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045419.1 MGP_129S1SvImJ_G0023108.1 mouse_genomes_project 17 3093890 3198305 + MGP_129S1SvImJ_P0045419 Synj2 protein_coding protein_coding MGP_129S1SvImJ_T0045420.1 MGP_129S1SvImJ_G0023108.1 mouse_genomes_project 17 3130398 3186007 + MGP_129S1SvImJ_P0045420 Synj2 protein_coding protein_coding MGP_129S1SvImJ_T0045421.1 MGP_129S1SvImJ_G0023108.1 mouse_genomes_project 17 3130453 3204040 + MGP_129S1SvImJ_P0045421 Synj2 protein_coding protein_coding MGP_129S1SvImJ_T0045422.1 MGP_129S1SvImJ_G0023108.1 mouse_genomes_project 17 3130552 3198305 + MGP_129S1SvImJ_P0045422 Synj2 protein_coding protein_coding MGP_129S1SvImJ_T0045423.1 MGP_129S1SvImJ_G0023108.1 mouse_genomes_project 17 3142732 3199092 + MGP_129S1SvImJ_P0045423 Synj2 protein_coding protein_coding MGP_129S1SvImJ_T0045424.1 MGP_129S1SvImJ_G0023108.1 mouse_genomes_project 17 3144812 3204040 + MGP_129S1SvImJ_P0045424 Synj2 protein_coding protein_coding MGP_129S1SvImJ_T0045425.1 MGP_129S1SvImJ_G0023108.1 mouse_genomes_project 17 3151365 3198078 + MGP_129S1SvImJ_P0045425 Synj2 protein_coding protein_coding MGP_129S1SvImJ_T0045426.1 MGP_129S1SvImJ_G0023108.1 mouse_genomes_project 17 3152195 3180318 + MGP_129S1SvImJ_P0045426 Synj2 protein_coding protein_coding MGP_129S1SvImJ_T0045427.1 MGP_129S1SvImJ_G0023108.1 mouse_genomes_project 17 3166662 3192680 + MGP_129S1SvImJ_P0045427 Synj2 protein_coding protein_coding MGP_129S1SvImJ_T0045428.1 MGP_129S1SvImJ_G0023108.1 mouse_genomes_project 17 3166679 3198156 + MGP_129S1SvImJ_P0045428 Synj2 protein_coding protein_coding MGP_129S1SvImJ_T0045429.1 MGP_129S1SvImJ_G0023108.1 mouse_genomes_project 17 3166694 3169573 + Synj2 protein_coding processed_transcript MGP_129S1SvImJ_T0045430.1 MGP_129S1SvImJ_G0023108.1 mouse_genomes_project 17 3173352 3198123 + MGP_129S1SvImJ_P0045430 Synj2 protein_coding protein_coding MGP_129S1SvImJ_T0045431.1 MGP_129S1SvImJ_G0023108.1 mouse_genomes_project 17 3184792 3197212 + MGP_129S1SvImJ_P0045431 Synj2 protein_coding protein_coding MGP_129S1SvImJ_T0047569.1 MGP_129S1SvImJ_G0023665.1 mouse_genomes_project 17 36200841 36201597 + Gnl1 protein_coding retained_intron MGP_129S1SvImJ_T0047570.1 MGP_129S1SvImJ_G0023665.1 mouse_genomes_project 17 36200956 36209218 + MGP_129S1SvImJ_P0047570 Gnl1 protein_coding protein_coding MGP_129S1SvImJ_T0047753.1 MGP_129S1SvImJ_G0023761.1 mouse_genomes_project 17 41615300 41645984 + MGP_129S1SvImJ_P0047753 Rhag protein_coding protein_coding MGP_129S1SvImJ_T0048044.1 MGP_129S1SvImJ_G0023849.1 mouse_genomes_project 17 48811123 48826711 + MGP_129S1SvImJ_P0048044 Med20 protein_coding protein_coding MGP_129S1SvImJ_T0048045.1 MGP_129S1SvImJ_G0023849.1 mouse_genomes_project 17 48811126 48821855 + Med20 protein_coding retained_intron MGP_129S1SvImJ_T0048048.1 MGP_129S1SvImJ_G0023849.1 mouse_genomes_project 17 48811149 48826541 + Med20 protein_coding retained_intron MGP_129S1SvImJ_T0048050.1 MGP_129S1SvImJ_G0023849.1 mouse_genomes_project 17 48811162 48812837 + Med20 protein_coding retained_intron MGP_129S1SvImJ_T0047632.1 MGP_129S1SvImJ_G0023689.1 mouse_genomes_project 17 37310336 37315802 - MGP_129S1SvImJ_P0047632 Znrd1 protein_coding protein_coding MGP_129S1SvImJ_T0047633.1 MGP_129S1SvImJ_G0023689.1 mouse_genomes_project 17 37310338 37315853 - MGP_129S1SvImJ_P0047633 Znrd1 protein_coding protein_coding MGP_129S1SvImJ_T0047634.1 MGP_129S1SvImJ_G0023689.1 mouse_genomes_project 17 37310391 37315638 - MGP_129S1SvImJ_P0047634 Znrd1 protein_coding protein_coding MGP_129S1SvImJ_T0047635.1 MGP_129S1SvImJ_G0023689.1 mouse_genomes_project 17 37310423 37315879 - Znrd1 protein_coding processed_transcript MGP_129S1SvImJ_T0045819.1 MGP_129S1SvImJ_G0023263.1 mouse_genomes_project 17 22590821 22592822 - MGP_129S1SvImJ_P0045819 Tnfrsf12a protein_coding protein_coding MGP_129S1SvImJ_T0045820.1 MGP_129S1SvImJ_G0023263.1 mouse_genomes_project 17 22590821 22592822 - MGP_129S1SvImJ_P0045820 Tnfrsf12a protein_coding protein_coding MGP_129S1SvImJ_T0047387.1 MGP_129S1SvImJ_G0023628.1 mouse_genomes_project 17 35348085 35351882 - MGP_129S1SvImJ_P0047387 Tnf protein_coding protein_coding MGP_129S1SvImJ_T0047388.1 MGP_129S1SvImJ_G0023628.1 mouse_genomes_project 17 35348211 35351879 - MGP_129S1SvImJ_P0047388 Tnf protein_coding protein_coding MGP_129S1SvImJ_T0017588.1 MGP_129S1SvImJ_G0015343.1 mouse_genomes_project 17 25029505 25048524 + Gm16278 processed_transcript processed_transcript MGP_129S1SvImJ_T0098531.1 MGP_129S1SvImJ_G0036616.1 mouse_genomes_project 17 49087885 49088004 + n-R5s28 rRNA rRNA MGP_129S1SvImJ_T0013266.1 MGP_129S1SvImJ_G0011355.1 mouse_genomes_project 17 37538921 37539518 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0045584.1 MGP_129S1SvImJ_G0023158.1 mouse_genomes_project 17 10720847 10731660 + MGP_129S1SvImJ_P0045584 Sod2 protein_coding protein_coding MGP_129S1SvImJ_T0102279.1 MGP_129S1SvImJ_G0040113.1 mouse_genomes_project 17 16092135 17777402 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0100841.1 MGP_129S1SvImJ_G0038908.1 mouse_genomes_project 17 85236225 85236354 - Gm22386 snoRNA snoRNA MGP_129S1SvImJ_T0100826.1 MGP_129S1SvImJ_G0038893.1 mouse_genomes_project 17 35306803 35306937 - Gm23442 snoRNA snoRNA MGP_129S1SvImJ_T0046626.1 MGP_129S1SvImJ_G0023458.1 mouse_genomes_project 17 28641700 28655147 + MGP_129S1SvImJ_P0046626 Rab44 protein_coding protein_coding MGP_129S1SvImJ_T0046627.1 MGP_129S1SvImJ_G0023458.1 mouse_genomes_project 17 28642983 28654410 + Rab44 protein_coding processed_transcript MGP_129S1SvImJ_T0046183.1 MGP_129S1SvImJ_G0023359.1 mouse_genomes_project 17 24659577 24752183 + MGP_129S1SvImJ_P0046183 Lmf1 protein_coding protein_coding MGP_129S1SvImJ_T0046184.1 MGP_129S1SvImJ_G0023359.1 mouse_genomes_project 17 24659580 24752183 + MGP_129S1SvImJ_P0046184 Lmf1 protein_coding protein_coding MGP_129S1SvImJ_T0046185.1 MGP_129S1SvImJ_G0023359.1 mouse_genomes_project 17 24659590 24680534 + Lmf1 protein_coding retained_intron MGP_129S1SvImJ_T0046186.1 MGP_129S1SvImJ_G0023359.1 mouse_genomes_project 17 24659590 24752079 + MGP_129S1SvImJ_P0046186 Lmf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046187.1 MGP_129S1SvImJ_G0023359.1 mouse_genomes_project 17 24659600 24742887 + MGP_129S1SvImJ_P0046187 Lmf1 protein_coding protein_coding MGP_129S1SvImJ_T0046188.1 MGP_129S1SvImJ_G0023359.1 mouse_genomes_project 17 24659602 24671212 + Lmf1 protein_coding retained_intron MGP_129S1SvImJ_T0046189.1 MGP_129S1SvImJ_G0023359.1 mouse_genomes_project 17 24659602 24722387 + Lmf1 protein_coding retained_intron MGP_129S1SvImJ_T0046190.1 MGP_129S1SvImJ_G0023359.1 mouse_genomes_project 17 24659602 24736046 + Lmf1 protein_coding retained_intron MGP_129S1SvImJ_T0046191.1 MGP_129S1SvImJ_G0023359.1 mouse_genomes_project 17 24659723 24718226 + Lmf1 protein_coding processed_transcript MGP_129S1SvImJ_T0046192.1 MGP_129S1SvImJ_G0023359.1 mouse_genomes_project 17 24743447 24744484 + MGP_129S1SvImJ_P0046192 Lmf1 protein_coding protein_coding MGP_129S1SvImJ_T0013304.1 MGP_129S1SvImJ_G0011393.1 mouse_genomes_project 17 75748191 75748863 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0046039.1 MGP_129S1SvImJ_G0023328.1 mouse_genomes_project 17 23912139 23917477 + MGP_129S1SvImJ_P0046039 Spsb3 protein_coding protein_coding MGP_129S1SvImJ_T0046040.1 MGP_129S1SvImJ_G0023328.1 mouse_genomes_project 17 23912167 23915926 + MGP_129S1SvImJ_P0046040 Spsb3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046041.1 MGP_129S1SvImJ_G0023328.1 mouse_genomes_project 17 23912202 23917467 + MGP_129S1SvImJ_P0046041 Spsb3 protein_coding protein_coding MGP_129S1SvImJ_T0046042.1 MGP_129S1SvImJ_G0023328.1 mouse_genomes_project 17 23912224 23917482 + Spsb3 protein_coding retained_intron MGP_129S1SvImJ_T0046043.1 MGP_129S1SvImJ_G0023328.1 mouse_genomes_project 17 23912614 23917479 + MGP_129S1SvImJ_P0046043 Spsb3 protein_coding protein_coding MGP_129S1SvImJ_T0046044.1 MGP_129S1SvImJ_G0023328.1 mouse_genomes_project 17 23913239 23917480 + MGP_129S1SvImJ_P0046044 Spsb3 protein_coding protein_coding MGP_129S1SvImJ_T0046045.1 MGP_129S1SvImJ_G0023328.1 mouse_genomes_project 17 23913311 23915770 + MGP_129S1SvImJ_P0046045 Spsb3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0003763.1 MGP_129S1SvImJ_G0003389.1 mouse_genomes_project 17 32670019 32671217 + Gm17115 antisense antisense MGP_129S1SvImJ_T0017567.1 MGP_129S1SvImJ_G0015334.1 mouse_genomes_project 17 5763126 5782296 - 4930506C21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017568.1 MGP_129S1SvImJ_G0015334.1 mouse_genomes_project 17 5766713 5768634 - 4930506C21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0047911.1 MGP_129S1SvImJ_G0023807.1 mouse_genomes_project 17 47290357 47294512 - MGP_129S1SvImJ_P0047911 Polr1c protein_coding protein_coding MGP_129S1SvImJ_T0047912.1 MGP_129S1SvImJ_G0023807.1 mouse_genomes_project 17 47290538 47293018 - MGP_129S1SvImJ_P0047912 Polr1c protein_coding protein_coding MGP_129S1SvImJ_T0047913.1 MGP_129S1SvImJ_G0023807.1 mouse_genomes_project 17 47290961 47294390 - Polr1c protein_coding retained_intron MGP_129S1SvImJ_T0047914.1 MGP_129S1SvImJ_G0023807.1 mouse_genomes_project 17 47291050 47294426 - MGP_129S1SvImJ_P0047914 Polr1c protein_coding protein_coding MGP_129S1SvImJ_T0047915.1 MGP_129S1SvImJ_G0023807.1 mouse_genomes_project 17 47291272 47294426 - MGP_129S1SvImJ_P0047915 Polr1c protein_coding protein_coding MGP_129S1SvImJ_T0047916.1 MGP_129S1SvImJ_G0023807.1 mouse_genomes_project 17 47291370 47294426 - MGP_129S1SvImJ_P0047916 Polr1c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047917.1 MGP_129S1SvImJ_G0023807.1 mouse_genomes_project 17 47291699 47294425 - Polr1c protein_coding retained_intron MGP_129S1SvImJ_T0047918.1 MGP_129S1SvImJ_G0023807.1 mouse_genomes_project 17 47293745 47294426 - Polr1c protein_coding retained_intron MGP_129S1SvImJ_T0047735.1 MGP_129S1SvImJ_G0023747.1 mouse_genomes_project 17 39843891 40324926 + MGP_129S1SvImJ_P0047735 Esp16 protein_coding protein_coding MGP_129S1SvImJ_T0006944.1 MGP_129S1SvImJ_G0005721.1 mouse_genomes_project 17 33852005 33856087 + lincRNA lincRNA MGP_129S1SvImJ_T0045671.1 MGP_129S1SvImJ_G0023184.1 mouse_genomes_project 17 15836807 15838848 + Spaca6 protein_coding processed_transcript MGP_129S1SvImJ_T0045672.1 MGP_129S1SvImJ_G0023184.1 mouse_genomes_project 17 15836981 15838161 + Spaca6 protein_coding retained_intron MGP_129S1SvImJ_T0045673.1 MGP_129S1SvImJ_G0023184.1 mouse_genomes_project 17 15837092 15845501 + MGP_129S1SvImJ_P0045673 Spaca6 protein_coding protein_coding MGP_129S1SvImJ_T0045674.1 MGP_129S1SvImJ_G0023184.1 mouse_genomes_project 17 15837152 15849437 + MGP_129S1SvImJ_P0045674 Spaca6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045675.1 MGP_129S1SvImJ_G0023184.1 mouse_genomes_project 17 15837268 15844940 + Spaca6 protein_coding processed_transcript MGP_129S1SvImJ_T0045676.1 MGP_129S1SvImJ_G0023184.1 mouse_genomes_project 17 15837268 15844940 + Spaca6 protein_coding retained_intron MGP_129S1SvImJ_T0045677.1 MGP_129S1SvImJ_G0023184.1 mouse_genomes_project 17 15837532 15844154 + MGP_129S1SvImJ_P0045677 Spaca6 protein_coding protein_coding MGP_129S1SvImJ_T0045678.1 MGP_129S1SvImJ_G0023184.1 mouse_genomes_project 17 15838129 15842584 + Spaca6 protein_coding retained_intron MGP_129S1SvImJ_T0045679.1 MGP_129S1SvImJ_G0023184.1 mouse_genomes_project 17 15839356 15843456 + Spaca6 protein_coding retained_intron MGP_129S1SvImJ_T0045680.1 MGP_129S1SvImJ_G0023184.1 mouse_genomes_project 17 15842379 15844953 + Spaca6 protein_coding retained_intron MGP_129S1SvImJ_T0045681.1 MGP_129S1SvImJ_G0023184.1 mouse_genomes_project 17 15843934 15845501 + Spaca6 protein_coding retained_intron MGP_129S1SvImJ_T0045682.1 MGP_129S1SvImJ_G0023184.1 mouse_genomes_project 17 15844124 15845497 + MGP_129S1SvImJ_P0045682 Spaca6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045683.1 MGP_129S1SvImJ_G0023184.1 mouse_genomes_project 17 15844711 15845501 + Spaca6 protein_coding retained_intron MGP_129S1SvImJ_T0045684.1 MGP_129S1SvImJ_G0023184.1 mouse_genomes_project 17 15845001 15845501 + Spaca6 protein_coding retained_intron MGP_129S1SvImJ_T0013246.1 MGP_129S1SvImJ_G0011335.1 mouse_genomes_project 17 25422722 25423740 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048645.1 MGP_129S1SvImJ_G0024052.1 mouse_genomes_project 17 82500101 82502088 + MGP_129S1SvImJ_P0048645 4921513D11Rik protein_coding protein_coding MGP_129S1SvImJ_T0006938.1 MGP_129S1SvImJ_G0005716.1 mouse_genomes_project 17 31340699 31342684 + 4833413E03Rik lincRNA lincRNA MGP_129S1SvImJ_T0006939.1 MGP_129S1SvImJ_G0005716.1 mouse_genomes_project 17 31341765 31342687 + 4833413E03Rik lincRNA lincRNA MGP_129S1SvImJ_T0102357.1 MGP_129S1SvImJ_G0040191.1 mouse_genomes_project 17 37750005 37750932 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0045687.1 MGP_129S1SvImJ_G0023187.1 mouse_genomes_project 17 15894018 15906216 + protein_coding processed_transcript MGP_129S1SvImJ_T0048062.1 MGP_129S1SvImJ_G0023855.1 mouse_genomes_project 17 48898843 48909324 + MGP_129S1SvImJ_P0048062 Frs3 protein_coding protein_coding MGP_129S1SvImJ_T0048065.1 MGP_129S1SvImJ_G0023855.1 mouse_genomes_project 17 48904999 48914059 + MGP_129S1SvImJ_P0048065 Frs3 protein_coding protein_coding MGP_129S1SvImJ_T0048066.1 MGP_129S1SvImJ_G0023855.1 mouse_genomes_project 17 48905026 48907471 + Frs3 protein_coding processed_transcript MGP_129S1SvImJ_T0048067.1 MGP_129S1SvImJ_G0023855.1 mouse_genomes_project 17 48909331 48910648 + Frs3 protein_coding processed_transcript MGP_129S1SvImJ_T0048068.1 MGP_129S1SvImJ_G0023855.1 mouse_genomes_project 17 48911837 48914057 + Frs3 protein_coding processed_transcript MGP_129S1SvImJ_T0045879.1 MGP_129S1SvImJ_G0023287.1 mouse_genomes_project 17 22998430 23023850 - MGP_129S1SvImJ_P0045879 Kctd5 protein_coding protein_coding MGP_129S1SvImJ_T0045880.1 MGP_129S1SvImJ_G0023287.1 mouse_genomes_project 17 23006397 23018654 - Kctd5 protein_coding processed_transcript MGP_129S1SvImJ_T0045783.1 MGP_129S1SvImJ_G0023251.1 mouse_genomes_project 17 21882275 22273148 + MGP_129S1SvImJ_P0045783 protein_coding protein_coding MGP_129S1SvImJ_T0045648.1 MGP_129S1SvImJ_G0023176.1 mouse_genomes_project 17 13362807 13370870 - MGP_129S1SvImJ_P0045648 Pdcd2 protein_coding protein_coding MGP_129S1SvImJ_T0045649.1 MGP_129S1SvImJ_G0023176.1 mouse_genomes_project 17 13365174 13370890 - MGP_129S1SvImJ_P0045649 Pdcd2 protein_coding protein_coding MGP_129S1SvImJ_T0045650.1 MGP_129S1SvImJ_G0023176.1 mouse_genomes_project 17 13365192 13365743 - Pdcd2 protein_coding retained_intron MGP_129S1SvImJ_T0045651.1 MGP_129S1SvImJ_G0023176.1 mouse_genomes_project 17 13366302 13370673 - Pdcd2 protein_coding retained_intron MGP_129S1SvImJ_T0045652.1 MGP_129S1SvImJ_G0023176.1 mouse_genomes_project 17 13366390 13370575 - Pdcd2 protein_coding retained_intron MGP_129S1SvImJ_T0102352.1 MGP_129S1SvImJ_G0040186.1 mouse_genomes_project 17 37327506 37329702 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0047745.1 MGP_129S1SvImJ_G0023757.1 mouse_genomes_project 17 41414604 41418628 + MGP_129S1SvImJ_P0047745 Esp4 protein_coding protein_coding MGP_129S1SvImJ_T0017592.1 MGP_129S1SvImJ_G0015347.1 mouse_genomes_project 17 33690727 33692617 + Gm17251 processed_transcript processed_transcript MGP_129S1SvImJ_T0006915.1 MGP_129S1SvImJ_G0005699.1 mouse_genomes_project 17 22447042 22448587 + Gm26695 lincRNA lincRNA MGP_129S1SvImJ_T0046388.1 MGP_129S1SvImJ_G0023405.1 mouse_genomes_project 17 25909246 25973515 + MGP_129S1SvImJ_P0046388 Crebrf protein_coding protein_coding MGP_129S1SvImJ_T0046389.1 MGP_129S1SvImJ_G0023405.1 mouse_genomes_project 17 25909251 25938129 + MGP_129S1SvImJ_P0046389 Crebrf protein_coding protein_coding MGP_129S1SvImJ_T0046390.1 MGP_129S1SvImJ_G0023405.1 mouse_genomes_project 17 25909306 25960159 + MGP_129S1SvImJ_P0046390 Crebrf protein_coding protein_coding MGP_129S1SvImJ_T0046391.1 MGP_129S1SvImJ_G0023405.1 mouse_genomes_project 17 25909320 25958198 + MGP_129S1SvImJ_P0046391 Crebrf protein_coding protein_coding MGP_129S1SvImJ_T0046392.1 MGP_129S1SvImJ_G0023405.1 mouse_genomes_project 17 25938153 25954087 + Crebrf protein_coding retained_intron MGP_129S1SvImJ_T0046393.1 MGP_129S1SvImJ_G0023405.1 mouse_genomes_project 17 25953601 25955819 + Crebrf protein_coding retained_intron MGP_129S1SvImJ_T0045821.1 MGP_129S1SvImJ_G0023264.1 mouse_genomes_project 17 22594735 22597822 + MGP_129S1SvImJ_P0045821 Cldn6 protein_coding protein_coding MGP_129S1SvImJ_T0047336.1 MGP_129S1SvImJ_G0023618.1 mouse_genomes_project 17 35255115 35256596 - MGP_129S1SvImJ_P0047336 Ly6g5b protein_coding protein_coding MGP_129S1SvImJ_T0047337.1 MGP_129S1SvImJ_G0023618.1 mouse_genomes_project 17 35255149 35256596 - MGP_129S1SvImJ_P0047337 Ly6g5b protein_coding protein_coding MGP_129S1SvImJ_T0046706.1 MGP_129S1SvImJ_G0023478.1 mouse_genomes_project 17 30606023 30650505 + MGP_129S1SvImJ_P0046706 Glp1r protein_coding protein_coding MGP_129S1SvImJ_T0013276.1 MGP_129S1SvImJ_G0011365.1 mouse_genomes_project 17 38969931 38970061 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017580.1 MGP_129S1SvImJ_G0015341.1 mouse_genomes_project 17 23385412 23395421 - D330041H03Rik processed_transcript antisense MGP_129S1SvImJ_T0017581.1 MGP_129S1SvImJ_G0015341.1 mouse_genomes_project 17 23390299 23395505 - D330041H03Rik processed_transcript antisense MGP_129S1SvImJ_T0017582.1 MGP_129S1SvImJ_G0015341.1 mouse_genomes_project 17 23390315 23395399 - D330041H03Rik processed_transcript antisense MGP_129S1SvImJ_T0017583.1 MGP_129S1SvImJ_G0015341.1 mouse_genomes_project 17 23393018 23394624 - D330041H03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017584.1 MGP_129S1SvImJ_G0015341.1 mouse_genomes_project 17 23393026 23395538 - D330041H03Rik processed_transcript antisense MGP_129S1SvImJ_T0017585.1 MGP_129S1SvImJ_G0015341.1 mouse_genomes_project 17 23393418 23395419 - D330041H03Rik processed_transcript retained_intron MGP_129S1SvImJ_T0017586.1 MGP_129S1SvImJ_G0015341.1 mouse_genomes_project 17 23393493 23395391 - D330041H03Rik processed_transcript antisense MGP_129S1SvImJ_T0048621.1 MGP_129S1SvImJ_G0024043.1 mouse_genomes_project 17 81687565 81720040 - MGP_129S1SvImJ_P0048621 Eif2ak2 protein_coding protein_coding MGP_129S1SvImJ_T0048622.1 MGP_129S1SvImJ_G0024043.1 mouse_genomes_project 17 81690342 81693974 - Eif2ak2 protein_coding processed_transcript MGP_129S1SvImJ_T0048623.1 MGP_129S1SvImJ_G0024043.1 mouse_genomes_project 17 81709847 81720015 - Eif2ak2 protein_coding processed_transcript MGP_129S1SvImJ_T0048624.1 MGP_129S1SvImJ_G0024043.1 mouse_genomes_project 17 81714202 81720021 - Eif2ak2 protein_coding processed_transcript MGP_129S1SvImJ_T0047415.1 MGP_129S1SvImJ_G0023640.1 mouse_genomes_project 17 35674127 35679217 + MGP_129S1SvImJ_P0047415 Pou5f1 protein_coding protein_coding MGP_129S1SvImJ_T0047416.1 MGP_129S1SvImJ_G0023640.1 mouse_genomes_project 17 35675591 35678751 + MGP_129S1SvImJ_P0047416 Pou5f1 protein_coding protein_coding MGP_129S1SvImJ_T0047417.1 MGP_129S1SvImJ_G0023640.1 mouse_genomes_project 17 35676951 35678751 + MGP_129S1SvImJ_P0047417 Pou5f1 protein_coding protein_coding MGP_129S1SvImJ_T0047418.1 MGP_129S1SvImJ_G0023640.1 mouse_genomes_project 17 35676953 35678751 + MGP_129S1SvImJ_P0047418 Pou5f1 protein_coding protein_coding MGP_129S1SvImJ_T0047419.1 MGP_129S1SvImJ_G0023640.1 mouse_genomes_project 17 35676963 35678751 + MGP_129S1SvImJ_P0047419 Pou5f1 protein_coding protein_coding MGP_129S1SvImJ_T0047420.1 MGP_129S1SvImJ_G0023640.1 mouse_genomes_project 17 35676967 35678751 + MGP_129S1SvImJ_P0047420 Pou5f1 protein_coding protein_coding MGP_129S1SvImJ_T0048835.1 MGP_129S1SvImJ_G0024117.1 mouse_genomes_project 17 96912238 96918311 + MGP_129S1SvImJ_P0048835 Adcyap1 protein_coding protein_coding MGP_129S1SvImJ_T0013269.1 MGP_129S1SvImJ_G0011358.1 mouse_genomes_project 17 38346295 38347232 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048550.1 MGP_129S1SvImJ_G0024018.1 mouse_genomes_project 17 75665393 75723078 + MGP_129S1SvImJ_P0048550 Lclat1 protein_coding protein_coding MGP_129S1SvImJ_T0048551.1 MGP_129S1SvImJ_G0024018.1 mouse_genomes_project 17 75665396 75754076 + MGP_129S1SvImJ_P0048551 Lclat1 protein_coding protein_coding MGP_129S1SvImJ_T0048552.1 MGP_129S1SvImJ_G0024018.1 mouse_genomes_project 17 75665402 75799443 + MGP_129S1SvImJ_P0048552 Lclat1 protein_coding protein_coding MGP_129S1SvImJ_T0048553.1 MGP_129S1SvImJ_G0024018.1 mouse_genomes_project 17 75725956 75795991 + Lclat1 protein_coding processed_transcript MGP_129S1SvImJ_T0048554.1 MGP_129S1SvImJ_G0024018.1 mouse_genomes_project 17 75761430 75796454 + Lclat1 protein_coding processed_transcript MGP_129S1SvImJ_T0099544.1 MGP_129S1SvImJ_G0037611.1 mouse_genomes_project 17 10839177 10839342 - Gm25730 snRNA snRNA MGP_129S1SvImJ_T0099563.1 MGP_129S1SvImJ_G0037630.1 mouse_genomes_project 17 46644177 46644258 + Gm25008 snRNA snRNA MGP_129S1SvImJ_T0048141.1 MGP_129S1SvImJ_G0023874.1 mouse_genomes_project 17 49741011 49744551 - Tspo2 protein_coding retained_intron MGP_129S1SvImJ_T0048142.1 MGP_129S1SvImJ_G0023874.1 mouse_genomes_project 17 49741487 49744581 - MGP_129S1SvImJ_P0048142 Tspo2 protein_coding protein_coding MGP_129S1SvImJ_T0048143.1 MGP_129S1SvImJ_G0023874.1 mouse_genomes_project 17 49741571 49743160 - MGP_129S1SvImJ_P0048143 Tspo2 protein_coding protein_coding MGP_129S1SvImJ_T0048144.1 MGP_129S1SvImJ_G0023874.1 mouse_genomes_project 17 49741620 49743157 - MGP_129S1SvImJ_P0048144 Tspo2 protein_coding protein_coding MGP_129S1SvImJ_T0048145.1 MGP_129S1SvImJ_G0023874.1 mouse_genomes_project 17 49743022 49744576 - Tspo2 protein_coding processed_transcript MGP_129S1SvImJ_T0047742.1 MGP_129S1SvImJ_G0023754.1 mouse_genomes_project 17 41336323 41346826 + MGP_129S1SvImJ_P0047742 Esp8 protein_coding protein_coding MGP_129S1SvImJ_T0102361.1 MGP_129S1SvImJ_G0040195.1 mouse_genomes_project 17 37791936 37792863 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0098333.1 MGP_129S1SvImJ_G0036418.1 mouse_genomes_project 17 38032491 38033456 - pseudogene pseudogene MGP_129S1SvImJ_T0017590.1 MGP_129S1SvImJ_G0015345.1 mouse_genomes_project 17 29459932 29466901 + Gm16758 processed_transcript processed_transcript MGP_129S1SvImJ_T0099551.1 MGP_129S1SvImJ_G0037618.1 mouse_genomes_project 17 28478195 28478367 - Gm23887 snRNA snRNA MGP_129S1SvImJ_T0046211.1 MGP_129S1SvImJ_G0023366.1 mouse_genomes_project 17 24875935 24881633 - MGP_129S1SvImJ_P0046211 Haghl protein_coding protein_coding MGP_129S1SvImJ_T0046212.1 MGP_129S1SvImJ_G0023366.1 mouse_genomes_project 17 24878881 24881675 - MGP_129S1SvImJ_P0046212 Haghl protein_coding protein_coding MGP_129S1SvImJ_T0046213.1 MGP_129S1SvImJ_G0023366.1 mouse_genomes_project 17 24878881 24881766 - MGP_129S1SvImJ_P0046213 Haghl protein_coding protein_coding MGP_129S1SvImJ_T0046214.1 MGP_129S1SvImJ_G0023366.1 mouse_genomes_project 17 24878882 24881428 - Haghl protein_coding retained_intron MGP_129S1SvImJ_T0046215.1 MGP_129S1SvImJ_G0023366.1 mouse_genomes_project 17 24878894 24881625 - Haghl protein_coding retained_intron MGP_129S1SvImJ_T0046216.1 MGP_129S1SvImJ_G0023366.1 mouse_genomes_project 17 24878915 24881660 - MGP_129S1SvImJ_P0046216 Haghl protein_coding protein_coding MGP_129S1SvImJ_T0046217.1 MGP_129S1SvImJ_G0023366.1 mouse_genomes_project 17 24878917 24881431 - MGP_129S1SvImJ_P0046217 Haghl protein_coding protein_coding MGP_129S1SvImJ_T0046218.1 MGP_129S1SvImJ_G0023366.1 mouse_genomes_project 17 24879632 24881660 - Haghl protein_coding retained_intron MGP_129S1SvImJ_T0046219.1 MGP_129S1SvImJ_G0023366.1 mouse_genomes_project 17 24879921 24881659 - Haghl protein_coding retained_intron MGP_129S1SvImJ_T0046220.1 MGP_129S1SvImJ_G0023366.1 mouse_genomes_project 17 24880225 24881398 - Haghl protein_coding retained_intron MGP_129S1SvImJ_T0046221.1 MGP_129S1SvImJ_G0023366.1 mouse_genomes_project 17 24880408 24881636 - MGP_129S1SvImJ_P0046221 Haghl protein_coding protein_coding MGP_129S1SvImJ_T0047998.1 MGP_129S1SvImJ_G0023833.1 mouse_genomes_project 17 47870563 47871336 + MGP_129S1SvImJ_P0047998 2310039H08Rik protein_coding protein_coding MGP_129S1SvImJ_T0048368.1 MGP_129S1SvImJ_G0023966.1 mouse_genomes_project 17 59511157 60176464 + MGP_129S1SvImJ_P0048368 Cntnap5c protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048369.1 MGP_129S1SvImJ_G0023966.1 mouse_genomes_project 17 59511157 60176464 + MGP_129S1SvImJ_P0048369 Cntnap5c protein_coding protein_coding MGP_129S1SvImJ_T0046787.1 MGP_129S1SvImJ_G0023498.1 mouse_genomes_project 17 31939558 31986777 - MGP_129S1SvImJ_P0046787 Notch3 protein_coding protein_coding MGP_129S1SvImJ_T0102366.1 MGP_129S1SvImJ_G0040200.1 mouse_genomes_project 17 38850421 38852134 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0048224.1 MGP_129S1SvImJ_G0023905.1 mouse_genomes_project 17 57607358 57617678 + MGP_129S1SvImJ_P0048224 Fsd1 protein_coding protein_coding MGP_129S1SvImJ_T0013282.1 MGP_129S1SvImJ_G0011371.1 mouse_genomes_project 17 49269953 49270147 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0047065.1 MGP_129S1SvImJ_G0023560.1 mouse_genomes_project 17 34140007 34153355 + MGP_129S1SvImJ_P0047065 protein_coding protein_coding MGP_129S1SvImJ_T0046406.1 MGP_129S1SvImJ_G0023410.1 mouse_genomes_project 17 26157563 26162326 + MGP_129S1SvImJ_P0046406 Phf1 protein_coding protein_coding MGP_129S1SvImJ_T0013287.1 MGP_129S1SvImJ_G0011376.1 mouse_genomes_project 17 55343533 55343917 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0047795.1 MGP_129S1SvImJ_G0023784.1 mouse_genomes_project 17 45451887 45710341 - MGP_129S1SvImJ_P0047795 Runx2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047796.1 MGP_129S1SvImJ_G0023784.1 mouse_genomes_project 17 45569209 45710813 - MGP_129S1SvImJ_P0047796 Runx2 protein_coding protein_coding MGP_129S1SvImJ_T0047797.1 MGP_129S1SvImJ_G0023784.1 mouse_genomes_project 17 45569209 45792877 - MGP_129S1SvImJ_P0047797 Runx2 protein_coding protein_coding MGP_129S1SvImJ_T0047798.1 MGP_129S1SvImJ_G0023784.1 mouse_genomes_project 17 45571429 45709875 - MGP_129S1SvImJ_P0047798 Runx2 protein_coding protein_coding MGP_129S1SvImJ_T0047799.1 MGP_129S1SvImJ_G0023784.1 mouse_genomes_project 17 45572698 45792661 - MGP_129S1SvImJ_P0047799 Runx2 protein_coding protein_coding MGP_129S1SvImJ_T0047800.1 MGP_129S1SvImJ_G0023784.1 mouse_genomes_project 17 45572986 45792306 - MGP_129S1SvImJ_P0047800 Runx2 protein_coding protein_coding MGP_129S1SvImJ_T0047801.1 MGP_129S1SvImJ_G0023784.1 mouse_genomes_project 17 45572986 45709799 - MGP_129S1SvImJ_P0047801 Runx2 protein_coding protein_coding MGP_129S1SvImJ_T0047802.1 MGP_129S1SvImJ_G0023784.1 mouse_genomes_project 17 45573072 45792707 - MGP_129S1SvImJ_P0047802 Runx2 protein_coding protein_coding MGP_129S1SvImJ_T0047803.1 MGP_129S1SvImJ_G0023784.1 mouse_genomes_project 17 45573168 45792877 - MGP_129S1SvImJ_P0047803 Runx2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047804.1 MGP_129S1SvImJ_G0023784.1 mouse_genomes_project 17 45573482 45709534 - MGP_129S1SvImJ_P0047804 Runx2 protein_coding protein_coding MGP_129S1SvImJ_T0047805.1 MGP_129S1SvImJ_G0023784.1 mouse_genomes_project 17 45602831 45709799 - MGP_129S1SvImJ_P0047805 Runx2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0047806.1 MGP_129S1SvImJ_G0023784.1 mouse_genomes_project 17 45605965 45708861 - MGP_129S1SvImJ_P0047806 Runx2 protein_coding protein_coding MGP_129S1SvImJ_T0047807.1 MGP_129S1SvImJ_G0023784.1 mouse_genomes_project 17 45606061 45792344 - MGP_129S1SvImJ_P0047807 Runx2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047812.1 MGP_129S1SvImJ_G0023784.1 mouse_genomes_project 17 45791985 45792707 - Runx2 protein_coding retained_intron MGP_129S1SvImJ_T0046161.1 MGP_129S1SvImJ_G0023354.1 mouse_genomes_project 17 24432731 24437886 + MGP_129S1SvImJ_P0046161 Tpsg1 protein_coding protein_coding MGP_129S1SvImJ_T0046162.1 MGP_129S1SvImJ_G0023354.1 mouse_genomes_project 17 24432747 24437595 + MGP_129S1SvImJ_P0046162 Tpsg1 protein_coding protein_coding MGP_129S1SvImJ_T0046163.1 MGP_129S1SvImJ_G0023354.1 mouse_genomes_project 17 24433985 24437886 + MGP_129S1SvImJ_P0046163 Tpsg1 protein_coding protein_coding MGP_129S1SvImJ_T0046164.1 MGP_129S1SvImJ_G0023354.1 mouse_genomes_project 17 24434016 24437888 + MGP_129S1SvImJ_P0046164 Tpsg1 protein_coding protein_coding MGP_129S1SvImJ_T0046165.1 MGP_129S1SvImJ_G0023354.1 mouse_genomes_project 17 24436454 24437831 + MGP_129S1SvImJ_P0046165 Tpsg1 protein_coding protein_coding MGP_129S1SvImJ_T0010189.1 MGP_129S1SvImJ_G0008305.1 mouse_genomes_project 17 15836431 15836548 - Gm25927 miRNA miRNA MGP_129S1SvImJ_T0010243.1 MGP_129S1SvImJ_G0008359.1 mouse_genomes_project 17 81115698 81115784 + Gm25069 miRNA miRNA MGP_129S1SvImJ_T0010206.1 MGP_129S1SvImJ_G0008322.1 mouse_genomes_project 17 26172512 26172576 - Mir3083 miRNA miRNA MGP_129S1SvImJ_T0048008.1 MGP_129S1SvImJ_G0023840.1 mouse_genomes_project 17 48130682 48130943 - MGP_129S1SvImJ_P0048008 Gm16494 protein_coding protein_coding MGP_129S1SvImJ_T0013321.1 MGP_129S1SvImJ_G0011410.1 mouse_genomes_project 17 95314471 95315700 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013320.1 MGP_129S1SvImJ_G0011409.1 mouse_genomes_project 17 94373626 94374867 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102362.1 MGP_129S1SvImJ_G0040196.1 mouse_genomes_project 17 37805939 37806660 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0046425.1 MGP_129S1SvImJ_G0023415.1 mouse_genomes_project 17 26256673 26269623 - MGP_129S1SvImJ_P0046425 Bak1 protein_coding protein_coding MGP_129S1SvImJ_T0046426.1 MGP_129S1SvImJ_G0023415.1 mouse_genomes_project 17 26256675 26269192 - MGP_129S1SvImJ_P0046426 Bak1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046427.1 MGP_129S1SvImJ_G0023415.1 mouse_genomes_project 17 26257529 26261134 - MGP_129S1SvImJ_P0046427 Bak1 protein_coding protein_coding MGP_129S1SvImJ_T0046428.1 MGP_129S1SvImJ_G0023415.1 mouse_genomes_project 17 26260923 26269201 - Bak1 protein_coding processed_transcript MGP_129S1SvImJ_T0045585.1 MGP_129S1SvImJ_G0023159.1 mouse_genomes_project 17 11073056 11084510 + MGP_129S1SvImJ_P0045585 protein_coding protein_coding MGP_129S1SvImJ_T0048364.1 MGP_129S1SvImJ_G0023963.1 mouse_genomes_project 17 59147628 59269106 + MGP_129S1SvImJ_P0048364 Adgre1 protein_coding protein_coding MGP_129S1SvImJ_T0048365.1 MGP_129S1SvImJ_G0023963.1 mouse_genomes_project 17 59147656 59269100 + MGP_129S1SvImJ_P0048365 Adgre1 protein_coding protein_coding MGP_129S1SvImJ_T0048249.1 MGP_129S1SvImJ_G0023914.1 mouse_genomes_project 17 57767107 57769374 - MGP_129S1SvImJ_P0048249 Lrg1 protein_coding protein_coding MGP_129S1SvImJ_T0013302.1 MGP_129S1SvImJ_G0011391.1 mouse_genomes_project 17 75208049 75208990 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102326.1 MGP_129S1SvImJ_G0040160.1 mouse_genomes_project 17 34905621 34908182 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099576.1 MGP_129S1SvImJ_G0037643.1 mouse_genomes_project 17 82919818 82919914 + Gm22215 snRNA snRNA MGP_129S1SvImJ_T0047703.1 MGP_129S1SvImJ_G0023721.1 mouse_genomes_project 17 38046120 38047364 - MGP_129S1SvImJ_P0047703 Olfr116 protein_coding protein_coding MGP_129S1SvImJ_T0045559.1 MGP_129S1SvImJ_G0023151.1 mouse_genomes_project 17 10544772 10546581 + MGP_129S1SvImJ_P0045559 Mrgprh protein_coding protein_coding MGP_129S1SvImJ_T0048056.1 MGP_129S1SvImJ_G0023853.1 mouse_genomes_project 17 48896551 48904257 - MGP_129S1SvImJ_P0048056 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048617.1 MGP_129S1SvImJ_G0024040.1 mouse_genomes_project 17 81590389 81670432 - MGP_129S1SvImJ_P0048617 Heatr5b protein_coding protein_coding MGP_129S1SvImJ_T0003758.1 MGP_129S1SvImJ_G0003387.1 mouse_genomes_project 17 29124300 29141498 - Tbc1d22bos antisense antisense MGP_129S1SvImJ_T0003759.1 MGP_129S1SvImJ_G0003387.1 mouse_genomes_project 17 29133019 29141472 - Tbc1d22bos antisense antisense MGP_129S1SvImJ_T0006959.1 MGP_129S1SvImJ_G0005734.1 mouse_genomes_project 17 38296392 38298258 + Gm20524 lincRNA lincRNA MGP_129S1SvImJ_T0013260.1 MGP_129S1SvImJ_G0011349.1 mouse_genomes_project 17 36601746 36602059 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099566.1 MGP_129S1SvImJ_G0037633.1 mouse_genomes_project 17 50658051 50658212 + Gm22978 snRNA snRNA MGP_129S1SvImJ_T0047700.1 MGP_129S1SvImJ_G0023718.1 mouse_genomes_project 17 38005918 38006913 - MGP_129S1SvImJ_P0047700 Olfr113 protein_coding protein_coding MGP_129S1SvImJ_T0047709.1 MGP_129S1SvImJ_G0023727.1 mouse_genomes_project 17 38264048 38268237 + MGP_129S1SvImJ_P0047709 Olfr122 protein_coding protein_coding MGP_129S1SvImJ_T0045947.1 MGP_129S1SvImJ_G0023301.1 mouse_genomes_project 17 23455951 23457070 + MGP_129S1SvImJ_P0045947 Pgp protein_coding protein_coding MGP_129S1SvImJ_T0047684.1 MGP_129S1SvImJ_G0023706.1 mouse_genomes_project 17 37648164 37652451 + MGP_129S1SvImJ_P0047684 H2-M3 protein_coding protein_coding MGP_129S1SvImJ_T0046378.1 MGP_129S1SvImJ_G0023402.1 mouse_genomes_project 17 25726489 25727549 + MGP_129S1SvImJ_P0046378 Gm8225 protein_coding protein_coding MGP_129S1SvImJ_T0048506.1 MGP_129S1SvImJ_G0024005.1 mouse_genomes_project 17 73616047 73671442 + Lpin2 protein_coding retained_intron MGP_129S1SvImJ_T0048507.1 MGP_129S1SvImJ_G0024005.1 mouse_genomes_project 17 73617043 73668605 + MGP_129S1SvImJ_P0048507 Lpin2 protein_coding protein_coding MGP_129S1SvImJ_T0048508.1 MGP_129S1SvImJ_G0024005.1 mouse_genomes_project 17 73617216 73657326 + Lpin2 protein_coding retained_intron MGP_129S1SvImJ_T0048509.1 MGP_129S1SvImJ_G0024005.1 mouse_genomes_project 17 73639461 73667803 + MGP_129S1SvImJ_P0048509 Lpin2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048510.1 MGP_129S1SvImJ_G0024005.1 mouse_genomes_project 17 73639583 73686027 + MGP_129S1SvImJ_P0048510 Lpin2 protein_coding protein_coding MGP_129S1SvImJ_T0048511.1 MGP_129S1SvImJ_G0024005.1 mouse_genomes_project 17 73667730 73674281 + Lpin2 protein_coding retained_intron MGP_129S1SvImJ_T0048512.1 MGP_129S1SvImJ_G0024005.1 mouse_genomes_project 17 73674858 73675597 + Lpin2 protein_coding retained_intron MGP_129S1SvImJ_T0048513.1 MGP_129S1SvImJ_G0024005.1 mouse_genomes_project 17 73674868 73682656 + MGP_129S1SvImJ_P0048513 Lpin2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048514.1 MGP_129S1SvImJ_G0024005.1 mouse_genomes_project 17 73676804 73681029 + Lpin2 protein_coding retained_intron MGP_129S1SvImJ_T0048515.1 MGP_129S1SvImJ_G0024005.1 mouse_genomes_project 17 73676905 73679682 + Lpin2 protein_coding retained_intron MGP_129S1SvImJ_T0048516.1 MGP_129S1SvImJ_G0024005.1 mouse_genomes_project 17 73678598 73682110 + Lpin2 protein_coding retained_intron MGP_129S1SvImJ_T0048517.1 MGP_129S1SvImJ_G0024005.1 mouse_genomes_project 17 73682233 73683515 + Lpin2 protein_coding retained_intron MGP_129S1SvImJ_T0046027.1 MGP_129S1SvImJ_G0023321.1 mouse_genomes_project 17 23753371 23761254 + MGP_129S1SvImJ_P0046027 Msrb1 protein_coding protein_coding MGP_129S1SvImJ_T0046028.1 MGP_129S1SvImJ_G0023321.1 mouse_genomes_project 17 23753411 23761247 + MGP_129S1SvImJ_P0046028 Msrb1 protein_coding protein_coding MGP_129S1SvImJ_T0013279.1 MGP_129S1SvImJ_G0011368.1 mouse_genomes_project 17 48159000 48159453 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048331.1 MGP_129S1SvImJ_G0023948.1 mouse_genomes_project 17 58749953 58757890 - MGP_129S1SvImJ_P0048331 Gtf2f1 protein_coding protein_coding MGP_129S1SvImJ_T0003754.1 MGP_129S1SvImJ_G0003384.1 mouse_genomes_project 17 28317448 28321816 - Pnpla1os antisense antisense MGP_129S1SvImJ_T0046375.1 MGP_129S1SvImJ_G0023401.1 mouse_genomes_project 17 25685683 25688613 - MGP_129S1SvImJ_P0046375 Dusp1 protein_coding protein_coding MGP_129S1SvImJ_T0046376.1 MGP_129S1SvImJ_G0023401.1 mouse_genomes_project 17 25685684 25688568 - Dusp1 protein_coding retained_intron MGP_129S1SvImJ_T0046377.1 MGP_129S1SvImJ_G0023401.1 mouse_genomes_project 17 25686609 25687817 - Dusp1 protein_coding retained_intron MGP_129S1SvImJ_T0046420.1 MGP_129S1SvImJ_G0023413.1 mouse_genomes_project 17 26204344 26207383 + MGP_129S1SvImJ_P0046420 Zbtb9 protein_coding protein_coding MGP_129S1SvImJ_T0048319.1 MGP_129S1SvImJ_G0023940.1 mouse_genomes_project 17 58497585 58534372 - MGP_129S1SvImJ_P0048319 Rfx2 protein_coding protein_coding MGP_129S1SvImJ_T0048320.1 MGP_129S1SvImJ_G0023940.1 mouse_genomes_project 17 58497585 58534372 - MGP_129S1SvImJ_P0048320 Rfx2 protein_coding protein_coding MGP_129S1SvImJ_T0045686.1 MGP_129S1SvImJ_G0023186.1 mouse_genomes_project 17 15882871 15890348 - MGP_129S1SvImJ_P0045686 Fpr1 protein_coding protein_coding MGP_129S1SvImJ_T0047432.1 MGP_129S1SvImJ_G0023643.1 mouse_genomes_project 17 35705166 35706613 + MGP_129S1SvImJ_P0047432 Psors1c2 protein_coding protein_coding MGP_129S1SvImJ_T0003768.1 MGP_129S1SvImJ_G0003392.1 mouse_genomes_project 17 33868412 33869291 - Gm19412 antisense antisense MGP_129S1SvImJ_T0003769.1 MGP_129S1SvImJ_G0003392.1 mouse_genomes_project 17 33868707 33869423 - Gm19412 antisense antisense MGP_129S1SvImJ_T0046108.1 MGP_129S1SvImJ_G0023339.1 mouse_genomes_project 17 24159444 24163953 + MGP_129S1SvImJ_P0046108 Ptx4 protein_coding protein_coding MGP_129S1SvImJ_T0046083.1 MGP_129S1SvImJ_G0023333.1 mouse_genomes_project 17 23971651 23990731 - MGP_129S1SvImJ_P0046083 Hn1l protein_coding protein_coding MGP_129S1SvImJ_T0047149.1 MGP_129S1SvImJ_G0023580.1 mouse_genomes_project 17 34677726 34680393 - MGP_129S1SvImJ_P0047149 Rnf5 protein_coding protein_coding MGP_129S1SvImJ_T0047150.1 MGP_129S1SvImJ_G0023580.1 mouse_genomes_project 17 34677970 34682392 - Rnf5 protein_coding retained_intron MGP_129S1SvImJ_T0046985.1 MGP_129S1SvImJ_G0023545.1 mouse_genomes_project 17 33888226 33889749 - MGP_129S1SvImJ_P0046985 Pfdn6 protein_coding protein_coding MGP_129S1SvImJ_T0046986.1 MGP_129S1SvImJ_G0023545.1 mouse_genomes_project 17 33888315 33889736 - MGP_129S1SvImJ_P0046986 Pfdn6 protein_coding protein_coding MGP_129S1SvImJ_T0046987.1 MGP_129S1SvImJ_G0023545.1 mouse_genomes_project 17 33888324 33889731 - MGP_129S1SvImJ_P0046987 Pfdn6 protein_coding protein_coding MGP_129S1SvImJ_T0046988.1 MGP_129S1SvImJ_G0023545.1 mouse_genomes_project 17 33888328 33889710 - MGP_129S1SvImJ_P0046988 Pfdn6 protein_coding protein_coding MGP_129S1SvImJ_T0046989.1 MGP_129S1SvImJ_G0023545.1 mouse_genomes_project 17 33888351 33889736 - MGP_129S1SvImJ_P0046989 Pfdn6 protein_coding protein_coding MGP_129S1SvImJ_T0046990.1 MGP_129S1SvImJ_G0023545.1 mouse_genomes_project 17 33888763 33889225 - Pfdn6 protein_coding retained_intron MGP_129S1SvImJ_T0047970.1 MGP_129S1SvImJ_G0023823.1 mouse_genomes_project 17 47723504 47724928 + Mrpl2 protein_coding processed_transcript MGP_129S1SvImJ_T0047971.1 MGP_129S1SvImJ_G0023823.1 mouse_genomes_project 17 47723531 47727400 + MGP_129S1SvImJ_P0047971 Mrpl2 protein_coding protein_coding MGP_129S1SvImJ_T0047972.1 MGP_129S1SvImJ_G0023823.1 mouse_genomes_project 17 47723564 47727399 + MGP_129S1SvImJ_P0047972 Mrpl2 protein_coding protein_coding MGP_129S1SvImJ_T0047973.1 MGP_129S1SvImJ_G0023823.1 mouse_genomes_project 17 47726272 47727259 + Mrpl2 protein_coding processed_transcript MGP_129S1SvImJ_T0045745.1 MGP_129S1SvImJ_G0023235.1 mouse_genomes_project 17 20437697 20437952 + MGP_129S1SvImJ_P0045745 Gm10226 protein_coding protein_coding MGP_129S1SvImJ_T0048366.1 MGP_129S1SvImJ_G0023964.1 mouse_genomes_project 17 59289288 59326856 - MGP_129S1SvImJ_P0048366 Vmn2r120 protein_coding protein_coding MGP_129S1SvImJ_T0047999.1 MGP_129S1SvImJ_G0023834.1 mouse_genomes_project 17 47871826 47880399 - MGP_129S1SvImJ_P0047999 Rpl7l1 protein_coding protein_coding MGP_129S1SvImJ_T0047858.1 MGP_129S1SvImJ_G0023797.1 mouse_genomes_project 17 46684308 46712712 - MGP_129S1SvImJ_P0047858 Tmem63b protein_coding protein_coding MGP_129S1SvImJ_T0047859.1 MGP_129S1SvImJ_G0023797.1 mouse_genomes_project 17 46687146 46689336 - Tmem63b protein_coding retained_intron MGP_129S1SvImJ_T0047860.1 MGP_129S1SvImJ_G0023797.1 mouse_genomes_project 17 46688240 46691015 - Tmem63b protein_coding retained_intron MGP_129S1SvImJ_T0047861.1 MGP_129S1SvImJ_G0023797.1 mouse_genomes_project 17 46692274 46712426 - MGP_129S1SvImJ_P0047861 Tmem63b protein_coding protein_coding MGP_129S1SvImJ_T0047862.1 MGP_129S1SvImJ_G0023797.1 mouse_genomes_project 17 46696526 46713358 - MGP_129S1SvImJ_P0047862 Tmem63b protein_coding protein_coding MGP_129S1SvImJ_T0047863.1 MGP_129S1SvImJ_G0023797.1 mouse_genomes_project 17 46700261 46707076 - MGP_129S1SvImJ_P0047863 Tmem63b protein_coding protein_coding MGP_129S1SvImJ_T0047864.1 MGP_129S1SvImJ_G0023797.1 mouse_genomes_project 17 46700491 46712590 - MGP_129S1SvImJ_P0047864 Tmem63b protein_coding protein_coding MGP_129S1SvImJ_T0047865.1 MGP_129S1SvImJ_G0023797.1 mouse_genomes_project 17 46705413 46712573 - MGP_129S1SvImJ_P0047865 Tmem63b protein_coding protein_coding MGP_129S1SvImJ_T0047866.1 MGP_129S1SvImJ_G0023797.1 mouse_genomes_project 17 46712676 46713340 - Tmem63b protein_coding processed_transcript MGP_129S1SvImJ_T0048746.1 MGP_129S1SvImJ_G0024099.1 mouse_genomes_project 17 90470904 90500975 + MGP_129S1SvImJ_P0048746 Socs5 protein_coding protein_coding MGP_129S1SvImJ_T0011461.1 MGP_129S1SvImJ_G0009577.1 mouse_genomes_project 17 88870008 88870280 + Gm27275 misc_RNA misc_RNA MGP_129S1SvImJ_T0011444.1 MGP_129S1SvImJ_G0009560.1 mouse_genomes_project 17 32849046 32849321 - Gm25667 misc_RNA misc_RNA MGP_129S1SvImJ_T0047114.1 MGP_129S1SvImJ_G0023574.1 mouse_genomes_project 17 34503523 34609150 - MGP_129S1SvImJ_P0047114 protein_coding protein_coding MGP_129S1SvImJ_T0011460.1 MGP_129S1SvImJ_G0009576.1 mouse_genomes_project 17 88868263 88868586 + Gm27283 misc_RNA misc_RNA MGP_129S1SvImJ_T0013278.1 MGP_129S1SvImJ_G0011367.1 mouse_genomes_project 17 42160856 42161857 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048556.1 MGP_129S1SvImJ_G0024020.1 mouse_genomes_project 17 76055122 76283654 - MGP_129S1SvImJ_P0048556 Galnt14 protein_coding protein_coding MGP_129S1SvImJ_T0048557.1 MGP_129S1SvImJ_G0024020.1 mouse_genomes_project 17 76069474 76283618 - MGP_129S1SvImJ_P0048557 Galnt14 protein_coding protein_coding MGP_129S1SvImJ_T0048558.1 MGP_129S1SvImJ_G0024020.1 mouse_genomes_project 17 76135812 76283656 - Galnt14 protein_coding retained_intron MGP_129S1SvImJ_T0102293.1 MGP_129S1SvImJ_G0040127.1 mouse_genomes_project 17 19093676 19094427 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0048103.1 MGP_129S1SvImJ_G0023861.1 mouse_genomes_project 17 49363936 49365217 + MGP_129S1SvImJ_P0048103 1700067P10Rik protein_coding protein_coding MGP_129S1SvImJ_T0048790.1 MGP_129S1SvImJ_G0024110.1 mouse_genomes_project 17 92024066 92084749 + MGP_129S1SvImJ_P0048790 Ppp1r21 protein_coding protein_coding MGP_129S1SvImJ_T0048791.1 MGP_129S1SvImJ_G0024110.1 mouse_genomes_project 17 92024164 92038261 + Ppp1r21 protein_coding retained_intron MGP_129S1SvImJ_T0048792.1 MGP_129S1SvImJ_G0024110.1 mouse_genomes_project 17 92058696 92062396 + Ppp1r21 protein_coding retained_intron MGP_129S1SvImJ_T0048793.1 MGP_129S1SvImJ_G0024110.1 mouse_genomes_project 17 92071458 92073707 + Ppp1r21 protein_coding retained_intron MGP_129S1SvImJ_T0048794.1 MGP_129S1SvImJ_G0024110.1 mouse_genomes_project 17 92071576 92075564 + Ppp1r21 protein_coding retained_intron MGP_129S1SvImJ_T0048795.1 MGP_129S1SvImJ_G0024110.1 mouse_genomes_project 17 92075113 92084747 + Ppp1r21 protein_coding retained_intron MGP_129S1SvImJ_T0045855.1 MGP_129S1SvImJ_G0023276.1 mouse_genomes_project 17 22776630 22788939 + Prss32 protein_coding processed_transcript MGP_129S1SvImJ_T0045856.1 MGP_129S1SvImJ_G0023276.1 mouse_genomes_project 17 22788018 22794188 + MGP_129S1SvImJ_P0045856 Prss32 protein_coding protein_coding MGP_129S1SvImJ_T0045857.1 MGP_129S1SvImJ_G0023276.1 mouse_genomes_project 17 22788261 22793748 + MGP_129S1SvImJ_P0045857 Prss32 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045945.1 MGP_129S1SvImJ_G0023300.1 mouse_genomes_project 17 23428780 23442014 - MGP_129S1SvImJ_P0045945 E4f1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0045946.1 MGP_129S1SvImJ_G0023300.1 mouse_genomes_project 17 23428800 23442049 - MGP_129S1SvImJ_P0045946 E4f1 protein_coding protein_coding MGP_129S1SvImJ_T0017620.1 MGP_129S1SvImJ_G0015354.1 mouse_genomes_project 17 50801844 50803148 - Gm20540 processed_transcript processed_transcript MGP_129S1SvImJ_T0047266.1 MGP_129S1SvImJ_G0023604.1 mouse_genomes_project 17 35112665 35114785 + Lsm2 protein_coding retained_intron MGP_129S1SvImJ_T0047267.1 MGP_129S1SvImJ_G0023604.1 mouse_genomes_project 17 35112683 35116695 + MGP_129S1SvImJ_P0047267 Lsm2 protein_coding protein_coding MGP_129S1SvImJ_T0047268.1 MGP_129S1SvImJ_G0023604.1 mouse_genomes_project 17 35112714 35116475 + Lsm2 protein_coding processed_transcript MGP_129S1SvImJ_T0047269.1 MGP_129S1SvImJ_G0023604.1 mouse_genomes_project 17 35112924 35116396 + Lsm2 protein_coding processed_transcript MGP_129S1SvImJ_T0047270.1 MGP_129S1SvImJ_G0023604.1 mouse_genomes_project 17 35112932 35116695 + MGP_129S1SvImJ_P0047270 Lsm2 protein_coding protein_coding MGP_129S1SvImJ_T0047271.1 MGP_129S1SvImJ_G0023604.1 mouse_genomes_project 17 35112962 35116693 + Lsm2 protein_coding processed_transcript MGP_129S1SvImJ_T0047272.1 MGP_129S1SvImJ_G0023604.1 mouse_genomes_project 17 35112962 35116638 + Lsm2 protein_coding processed_transcript MGP_129S1SvImJ_T0047273.1 MGP_129S1SvImJ_G0023604.1 mouse_genomes_project 17 35112962 35116693 + MGP_129S1SvImJ_P0047273 Lsm2 protein_coding protein_coding MGP_129S1SvImJ_T0047274.1 MGP_129S1SvImJ_G0023604.1 mouse_genomes_project 17 35112972 35116301 + Lsm2 protein_coding retained_intron MGP_129S1SvImJ_T0047275.1 MGP_129S1SvImJ_G0023604.1 mouse_genomes_project 17 35113012 35116301 + Lsm2 protein_coding retained_intron MGP_129S1SvImJ_T0047276.1 MGP_129S1SvImJ_G0023604.1 mouse_genomes_project 17 35115411 35116694 + Lsm2 protein_coding retained_intron MGP_129S1SvImJ_T0045636.1 MGP_129S1SvImJ_G0023174.1 mouse_genomes_project 17 13320839 13341333 - MGP_129S1SvImJ_P0045636 Psmb1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0010240.1 MGP_129S1SvImJ_G0008356.1 mouse_genomes_project 17 66517122 66517224 + Mir6420 miRNA miRNA MGP_129S1SvImJ_T0099564.1 MGP_129S1SvImJ_G0037631.1 mouse_genomes_project 17 47279802 47279909 - Gm22474 snRNA snRNA MGP_129S1SvImJ_T0003800.1 MGP_129S1SvImJ_G0003418.1 mouse_genomes_project 17 60794027 60810822 + Nudt12os antisense antisense MGP_129S1SvImJ_T0003801.1 MGP_129S1SvImJ_G0003418.1 mouse_genomes_project 17 60794051 60824436 + Nudt12os antisense antisense MGP_129S1SvImJ_T0003802.1 MGP_129S1SvImJ_G0003418.1 mouse_genomes_project 17 60815994 60824184 + Nudt12os antisense antisense MGP_129S1SvImJ_T0045903.1 MGP_129S1SvImJ_G0023292.1 mouse_genomes_project 17 23130820 23163601 - MGP_129S1SvImJ_P0045903 Tbc1d24 protein_coding protein_coding MGP_129S1SvImJ_T0045904.1 MGP_129S1SvImJ_G0023292.1 mouse_genomes_project 17 23130821 23163628 - MGP_129S1SvImJ_P0045904 Tbc1d24 protein_coding protein_coding MGP_129S1SvImJ_T0045905.1 MGP_129S1SvImJ_G0023292.1 mouse_genomes_project 17 23132477 23163581 - MGP_129S1SvImJ_P0045905 Tbc1d24 protein_coding protein_coding MGP_129S1SvImJ_T0045906.1 MGP_129S1SvImJ_G0023292.1 mouse_genomes_project 17 23136565 23163585 - MGP_129S1SvImJ_P0045906 Tbc1d24 protein_coding protein_coding MGP_129S1SvImJ_T0045907.1 MGP_129S1SvImJ_G0023292.1 mouse_genomes_project 17 23136738 23163580 - MGP_129S1SvImJ_P0045907 Tbc1d24 protein_coding protein_coding MGP_129S1SvImJ_T0045908.1 MGP_129S1SvImJ_G0023292.1 mouse_genomes_project 17 23136784 23163597 - MGP_129S1SvImJ_P0045908 Tbc1d24 protein_coding protein_coding MGP_129S1SvImJ_T0045909.1 MGP_129S1SvImJ_G0023292.1 mouse_genomes_project 17 23136795 23158014 - MGP_129S1SvImJ_P0045909 Tbc1d24 protein_coding protein_coding MGP_129S1SvImJ_T0045910.1 MGP_129S1SvImJ_G0023292.1 mouse_genomes_project 17 23136845 23163562 - MGP_129S1SvImJ_P0045910 Tbc1d24 protein_coding protein_coding MGP_129S1SvImJ_T0045911.1 MGP_129S1SvImJ_G0023292.1 mouse_genomes_project 17 23136845 23163589 - MGP_129S1SvImJ_P0045911 Tbc1d24 protein_coding protein_coding MGP_129S1SvImJ_T0045912.1 MGP_129S1SvImJ_G0023292.1 mouse_genomes_project 17 23136864 23163580 - MGP_129S1SvImJ_P0045912 Tbc1d24 protein_coding protein_coding MGP_129S1SvImJ_T0045913.1 MGP_129S1SvImJ_G0023292.1 mouse_genomes_project 17 23136865 23158014 - MGP_129S1SvImJ_P0045913 Tbc1d24 protein_coding protein_coding MGP_129S1SvImJ_T0045914.1 MGP_129S1SvImJ_G0023292.1 mouse_genomes_project 17 23137011 23163591 - MGP_129S1SvImJ_P0045914 Tbc1d24 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045915.1 MGP_129S1SvImJ_G0023292.1 mouse_genomes_project 17 23138215 23139039 - Tbc1d24 protein_coding processed_transcript MGP_129S1SvImJ_T0045916.1 MGP_129S1SvImJ_G0023292.1 mouse_genomes_project 17 23139413 23163548 - MGP_129S1SvImJ_P0045916 Tbc1d24 protein_coding protein_coding MGP_129S1SvImJ_T0045917.1 MGP_129S1SvImJ_G0023292.1 mouse_genomes_project 17 23147673 23163585 - Tbc1d24 protein_coding processed_transcript MGP_129S1SvImJ_T0045918.1 MGP_129S1SvImJ_G0023292.1 mouse_genomes_project 17 23161913 23167456 - MGP_129S1SvImJ_P0045918 Tbc1d24 protein_coding protein_coding MGP_129S1SvImJ_T0047232.1 MGP_129S1SvImJ_G0023595.1 mouse_genomes_project 17 34974420 34996950 - MGP_129S1SvImJ_P0047232 C2 protein_coding protein_coding MGP_129S1SvImJ_T0047233.1 MGP_129S1SvImJ_G0023595.1 mouse_genomes_project 17 34974421 34997024 - MGP_129S1SvImJ_P0047233 C2 protein_coding protein_coding MGP_129S1SvImJ_T0047234.1 MGP_129S1SvImJ_G0023595.1 mouse_genomes_project 17 34974422 35013269 - MGP_129S1SvImJ_P0047234 C2 protein_coding protein_coding MGP_129S1SvImJ_T0047235.1 MGP_129S1SvImJ_G0023595.1 mouse_genomes_project 17 34975488 34976229 - MGP_129S1SvImJ_P0047235 C2 protein_coding protein_coding MGP_129S1SvImJ_T0047236.1 MGP_129S1SvImJ_G0023595.1 mouse_genomes_project 17 34975985 34976769 - C2 protein_coding retained_intron MGP_129S1SvImJ_T0047237.1 MGP_129S1SvImJ_G0023595.1 mouse_genomes_project 17 34991178 34996891 - C2 protein_coding processed_transcript MGP_129S1SvImJ_T0047239.1 MGP_129S1SvImJ_G0023595.1 mouse_genomes_project 17 35009721 35013279 - C2 protein_coding processed_transcript MGP_129S1SvImJ_T0047240.1 MGP_129S1SvImJ_G0023595.1 mouse_genomes_project 17 35009724 35016017 - C2 protein_coding processed_transcript MGP_129S1SvImJ_T0048325.1 MGP_129S1SvImJ_G0023944.1 mouse_genomes_project 17 58694743 58726563 - MGP_129S1SvImJ_P0048325 Acer1 protein_coding protein_coding MGP_129S1SvImJ_T0013259.1 MGP_129S1SvImJ_G0011348.1 mouse_genomes_project 17 36542146 36542612 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0046469.1 MGP_129S1SvImJ_G0023426.1 mouse_genomes_project 17 27040079 27055440 - MGP_129S1SvImJ_P0046469 Spdef protein_coding protein_coding MGP_129S1SvImJ_T0046470.1 MGP_129S1SvImJ_G0023426.1 mouse_genomes_project 17 27040174 27055441 - MGP_129S1SvImJ_P0046470 Spdef protein_coding protein_coding MGP_129S1SvImJ_T0046471.1 MGP_129S1SvImJ_G0023426.1 mouse_genomes_project 17 27040176 27055379 - MGP_129S1SvImJ_P0046471 Spdef protein_coding protein_coding MGP_129S1SvImJ_T0046472.1 MGP_129S1SvImJ_G0023426.1 mouse_genomes_project 17 27040232 27043299 - Spdef protein_coding processed_transcript MGP_129S1SvImJ_T0046473.1 MGP_129S1SvImJ_G0023426.1 mouse_genomes_project 17 27046501 27055414 - MGP_129S1SvImJ_P0046473 Spdef protein_coding protein_coding MGP_129S1SvImJ_T0011440.1 MGP_129S1SvImJ_G0009556.1 mouse_genomes_project 17 15779518 15779804 + Gm23837 misc_RNA misc_RNA MGP_129S1SvImJ_T0047607.1 MGP_129S1SvImJ_G0023682.1 mouse_genomes_project 17 37187002 37187724 + Trim26 protein_coding retained_intron MGP_129S1SvImJ_T0047608.1 MGP_129S1SvImJ_G0023682.1 mouse_genomes_project 17 37187009 37205761 + Trim26 protein_coding retained_intron MGP_129S1SvImJ_T0047609.1 MGP_129S1SvImJ_G0023682.1 mouse_genomes_project 17 37187009 37209110 + MGP_129S1SvImJ_P0047609 Trim26 protein_coding protein_coding MGP_129S1SvImJ_T0047610.1 MGP_129S1SvImJ_G0023682.1 mouse_genomes_project 17 37187011 37209128 + MGP_129S1SvImJ_P0047610 Trim26 protein_coding protein_coding MGP_129S1SvImJ_T0047611.1 MGP_129S1SvImJ_G0023682.1 mouse_genomes_project 17 37187014 37209110 + MGP_129S1SvImJ_P0047611 Trim26 protein_coding protein_coding MGP_129S1SvImJ_T0047612.1 MGP_129S1SvImJ_G0023682.1 mouse_genomes_project 17 37187041 37202419 + MGP_129S1SvImJ_P0047612 Trim26 protein_coding protein_coding MGP_129S1SvImJ_T0047613.1 MGP_129S1SvImJ_G0023682.1 mouse_genomes_project 17 37187052 37207357 + MGP_129S1SvImJ_P0047613 Trim26 protein_coding protein_coding MGP_129S1SvImJ_T0047614.1 MGP_129S1SvImJ_G0023682.1 mouse_genomes_project 17 37187052 37209127 + MGP_129S1SvImJ_P0047614 Trim26 protein_coding protein_coding MGP_129S1SvImJ_T0047615.1 MGP_129S1SvImJ_G0023682.1 mouse_genomes_project 17 37202231 37207669 + MGP_129S1SvImJ_P0047615 Trim26 protein_coding protein_coding MGP_129S1SvImJ_T0047616.1 MGP_129S1SvImJ_G0023682.1 mouse_genomes_project 17 37204363 37209128 + Trim26 protein_coding processed_transcript MGP_129S1SvImJ_T0047952.1 MGP_129S1SvImJ_G0023815.1 mouse_genomes_project 17 47483302 47489604 - MGP_129S1SvImJ_P0047952 Slc22a7 protein_coding protein_coding MGP_129S1SvImJ_T0045504.1 MGP_129S1SvImJ_G0023134.1 mouse_genomes_project 17 5806456 5810190 + MGP_129S1SvImJ_P0045504 Prr18 protein_coding protein_coding MGP_129S1SvImJ_T0045505.1 MGP_129S1SvImJ_G0023134.1 mouse_genomes_project 17 5806789 5810190 + MGP_129S1SvImJ_P0045505 Prr18 protein_coding protein_coding MGP_129S1SvImJ_T0047308.1 MGP_129S1SvImJ_G0023609.1 mouse_genomes_project 17 35186312 35198553 + MGP_129S1SvImJ_P0047308 Clic1 protein_coding protein_coding MGP_129S1SvImJ_T0047309.1 MGP_129S1SvImJ_G0023609.1 mouse_genomes_project 17 35188655 35193611 + Clic1 protein_coding retained_intron MGP_129S1SvImJ_T0102304.1 MGP_129S1SvImJ_G0040138.1 mouse_genomes_project 17 21904390 21906753 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102344.1 MGP_129S1SvImJ_G0040178.1 mouse_genomes_project 17 36899520 36899746 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0046058.1 MGP_129S1SvImJ_G0023332.1 mouse_genomes_project 17 23921829 23922862 + MGP_129S1SvImJ_P0046058 Nme3 protein_coding protein_coding MGP_129S1SvImJ_T0046059.1 MGP_129S1SvImJ_G0023332.1 mouse_genomes_project 17 23921834 23922675 + Nme3 protein_coding processed_transcript MGP_129S1SvImJ_T0046060.1 MGP_129S1SvImJ_G0023332.1 mouse_genomes_project 17 23921850 23922584 + Nme3 protein_coding retained_intron MGP_129S1SvImJ_T0046061.1 MGP_129S1SvImJ_G0023332.1 mouse_genomes_project 17 23921852 23922824 + Nme3 protein_coding retained_intron MGP_129S1SvImJ_T0046062.1 MGP_129S1SvImJ_G0023332.1 mouse_genomes_project 17 23922090 23922687 + Nme3 protein_coding retained_intron MGP_129S1SvImJ_T0047391.1 MGP_129S1SvImJ_G0023631.1 mouse_genomes_project 17 35372301 35375602 + MGP_129S1SvImJ_P0047391 Gm16181 protein_coding protein_coding MGP_129S1SvImJ_T0046880.1 MGP_129S1SvImJ_G0023529.1 mouse_genomes_project 17 33442355 33472569 + MGP_129S1SvImJ_P0046880 Adamts10 protein_coding protein_coding MGP_129S1SvImJ_T0046881.1 MGP_129S1SvImJ_G0023529.1 mouse_genomes_project 17 33442355 33472569 + MGP_129S1SvImJ_P0046881 Adamts10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046882.1 MGP_129S1SvImJ_G0023529.1 mouse_genomes_project 17 33442360 33472568 + MGP_129S1SvImJ_P0046882 Adamts10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046883.1 MGP_129S1SvImJ_G0023529.1 mouse_genomes_project 17 33442361 33447945 + Adamts10 protein_coding retained_intron MGP_129S1SvImJ_T0046884.1 MGP_129S1SvImJ_G0023529.1 mouse_genomes_project 17 33442377 33472569 + MGP_129S1SvImJ_P0046884 Adamts10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046885.1 MGP_129S1SvImJ_G0023529.1 mouse_genomes_project 17 33447094 33472249 + MGP_129S1SvImJ_P0046885 Adamts10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046886.1 MGP_129S1SvImJ_G0023529.1 mouse_genomes_project 17 33447094 33472249 + MGP_129S1SvImJ_P0046886 Adamts10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046887.1 MGP_129S1SvImJ_G0023529.1 mouse_genomes_project 17 33450410 33472568 + MGP_129S1SvImJ_P0046887 Adamts10 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046888.1 MGP_129S1SvImJ_G0023529.1 mouse_genomes_project 17 33450519 33462026 + Adamts10 protein_coding processed_transcript MGP_129S1SvImJ_T0046889.1 MGP_129S1SvImJ_G0023529.1 mouse_genomes_project 17 33456137 33472569 + Adamts10 protein_coding retained_intron MGP_129S1SvImJ_T0046890.1 MGP_129S1SvImJ_G0023529.1 mouse_genomes_project 17 33456520 33472571 + Adamts10 protein_coding retained_intron MGP_129S1SvImJ_T0046891.1 MGP_129S1SvImJ_G0023529.1 mouse_genomes_project 17 33462326 33472583 + Adamts10 protein_coding retained_intron MGP_129S1SvImJ_T0045851.1 MGP_129S1SvImJ_G0023275.1 mouse_genomes_project 17 22767105 22776945 - MGP_129S1SvImJ_P0045851 Prss41 protein_coding protein_coding MGP_129S1SvImJ_T0045852.1 MGP_129S1SvImJ_G0023275.1 mouse_genomes_project 17 22767105 22776928 - MGP_129S1SvImJ_P0045852 Prss41 protein_coding protein_coding MGP_129S1SvImJ_T0045853.1 MGP_129S1SvImJ_G0023275.1 mouse_genomes_project 17 22773890 22776945 - MGP_129S1SvImJ_P0045853 Prss41 protein_coding protein_coding MGP_129S1SvImJ_T0045854.1 MGP_129S1SvImJ_G0023275.1 mouse_genomes_project 17 22775019 22776922 - Prss41 protein_coding retained_intron MGP_129S1SvImJ_T0098533.1 MGP_129S1SvImJ_G0036618.1 mouse_genomes_project 17 73962275 73962383 - Gm23115 rRNA rRNA MGP_129S1SvImJ_T0045545.1 MGP_129S1SvImJ_G0023147.1 mouse_genomes_project 17 10249537 10292838 + MGP_129S1SvImJ_P0045545 Slc22a2 protein_coding protein_coding MGP_129S1SvImJ_T0047764.1 MGP_129S1SvImJ_G0023769.1 mouse_genomes_project 17 43560733 43593375 - MGP_129S1SvImJ_P0047764 Adgrf2 protein_coding protein_coding MGP_129S1SvImJ_T0047389.1 MGP_129S1SvImJ_G0023629.1 mouse_genomes_project 17 35353039 35355172 - MGP_129S1SvImJ_P0047389 Lta protein_coding protein_coding MGP_129S1SvImJ_T0013307.1 MGP_129S1SvImJ_G0011396.1 mouse_genomes_project 17 79672787 79673103 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0047414.1 MGP_129S1SvImJ_G0023639.1 mouse_genomes_project 17 35639988 35643332 + MGP_129S1SvImJ_P0047414 H2-Q10 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0045771.1 MGP_129S1SvImJ_G0023247.1 mouse_genomes_project 17 21260345 21286165 + Zfp946 protein_coding processed_transcript MGP_129S1SvImJ_T0045772.1 MGP_129S1SvImJ_G0023247.1 mouse_genomes_project 17 21260382 21295417 + MGP_129S1SvImJ_P0045772 Zfp946 protein_coding protein_coding MGP_129S1SvImJ_T0045773.1 MGP_129S1SvImJ_G0023247.1 mouse_genomes_project 17 21260391 21295417 + MGP_129S1SvImJ_P0045773 Zfp946 protein_coding protein_coding MGP_129S1SvImJ_T0045774.1 MGP_129S1SvImJ_G0023247.1 mouse_genomes_project 17 21285390 21295418 + MGP_129S1SvImJ_P0045774 Zfp946 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0045775.1 MGP_129S1SvImJ_G0023247.1 mouse_genomes_project 17 21289852 21294566 + MGP_129S1SvImJ_P0045775 Zfp946 protein_coding protein_coding MGP_129S1SvImJ_T0046824.1 MGP_129S1SvImJ_G0023505.1 mouse_genomes_project 17 32251674 32259674 - MGP_129S1SvImJ_P0046824 Pglyrp2 protein_coding protein_coding MGP_129S1SvImJ_T0046825.1 MGP_129S1SvImJ_G0023505.1 mouse_genomes_project 17 32251935 32264208 - MGP_129S1SvImJ_P0046825 Pglyrp2 protein_coding protein_coding MGP_129S1SvImJ_T0010201.1 MGP_129S1SvImJ_G0008317.1 mouse_genomes_project 17 24928697 24928761 - Mir3082 miRNA miRNA MGP_129S1SvImJ_T0048195.1 MGP_129S1SvImJ_G0023888.1 mouse_genomes_project 17 55061141 55106293 - MGP_129S1SvImJ_P0048195 Pp2d1 protein_coding protein_coding MGP_129S1SvImJ_T0046228.1 MGP_129S1SvImJ_G0023371.1 mouse_genomes_project 17 24920957 24926063 + MGP_129S1SvImJ_P0046228 Wdr24 protein_coding protein_coding MGP_129S1SvImJ_T0046229.1 MGP_129S1SvImJ_G0023371.1 mouse_genomes_project 17 24920979 24926054 + Wdr24 protein_coding retained_intron MGP_129S1SvImJ_T0046230.1 MGP_129S1SvImJ_G0023371.1 mouse_genomes_project 17 24921860 24923002 + Wdr24 protein_coding processed_transcript MGP_129S1SvImJ_T0046231.1 MGP_129S1SvImJ_G0023371.1 mouse_genomes_project 17 24921992 24923675 + Wdr24 protein_coding retained_intron MGP_129S1SvImJ_T0102320.1 MGP_129S1SvImJ_G0040154.1 mouse_genomes_project 17 34516451 34516836 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0045952.1 MGP_129S1SvImJ_G0023304.1 mouse_genomes_project 17 23476451 23498010 + MGP_129S1SvImJ_P0045952 Caskin1 protein_coding protein_coding MGP_129S1SvImJ_T0046664.1 MGP_129S1SvImJ_G0023468.1 mouse_genomes_project 17 29095201 29152205 + MGP_129S1SvImJ_P0046664 Tbc1d22b protein_coding protein_coding MGP_129S1SvImJ_T0046665.1 MGP_129S1SvImJ_G0023468.1 mouse_genomes_project 17 29117775 29152204 + Tbc1d22b protein_coding retained_intron MGP_129S1SvImJ_T0048527.1 MGP_129S1SvImJ_G0024008.1 mouse_genomes_project 17 73912549 73914141 - Gm4707 protein_coding translated_processed_pseudogene MGP_129S1SvImJ_T0048528.1 MGP_129S1SvImJ_G0024008.1 mouse_genomes_project 17 73913247 73913523 - MGP_129S1SvImJ_P0048528 Gm4707 protein_coding protein_coding MGP_129S1SvImJ_T0048529.1 MGP_129S1SvImJ_G0024008.1 mouse_genomes_project 17 73914052 73914618 - MGP_129S1SvImJ_P0048529 Gm4707 protein_coding protein_coding MGP_129S1SvImJ_T0001008.1 MGP_129S1SvImJ_G0000937.1 mouse_genomes_project 17 31313141 31316133 - TEC TEC MGP_129S1SvImJ_T0047986.1 MGP_129S1SvImJ_G0023829.1 mouse_genomes_project 17 47797027 47813154 + Pex6 protein_coding retained_intron MGP_129S1SvImJ_T0047987.1 MGP_129S1SvImJ_G0023829.1 mouse_genomes_project 17 47797027 47813154 + MGP_129S1SvImJ_P0047987 Pex6 protein_coding protein_coding MGP_129S1SvImJ_T0047988.1 MGP_129S1SvImJ_G0023829.1 mouse_genomes_project 17 47797040 47803007 + Pex6 protein_coding processed_transcript MGP_129S1SvImJ_T0047989.1 MGP_129S1SvImJ_G0023829.1 mouse_genomes_project 17 47807769 47809313 + Pex6 protein_coding retained_intron MGP_129S1SvImJ_T0045692.1 MGP_129S1SvImJ_G0023191.1 mouse_genomes_project 17 16081497 19070330 + MGP_129S1SvImJ_P0045692 Vmn2r124 protein_coding protein_coding MGP_129S1SvImJ_T0006902.1 MGP_129S1SvImJ_G0005687.1 mouse_genomes_project 17 4043573 4073225 - Gm2885 lincRNA lincRNA MGP_129S1SvImJ_T0048396.1 MGP_129S1SvImJ_G0023977.1 mouse_genomes_project 17 67708331 67743061 - MGP_129S1SvImJ_P0048396 Vapa protein_coding protein_coding MGP_129S1SvImJ_T0102319.1 MGP_129S1SvImJ_G0040153.1 mouse_genomes_project 17 34495313 34495715 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0046290.1 MGP_129S1SvImJ_G0023382.1 mouse_genomes_project 17 25038003 25049941 - MGP_129S1SvImJ_P0046290 Pigq protein_coding protein_coding MGP_129S1SvImJ_T0046291.1 MGP_129S1SvImJ_G0023382.1 mouse_genomes_project 17 25038004 25054662 - Pigq protein_coding retained_intron MGP_129S1SvImJ_T0046292.1 MGP_129S1SvImJ_G0023382.1 mouse_genomes_project 17 25038004 25054827 - MGP_129S1SvImJ_P0046292 Pigq protein_coding protein_coding MGP_129S1SvImJ_T0046293.1 MGP_129S1SvImJ_G0023382.1 mouse_genomes_project 17 25038004 25054714 - MGP_129S1SvImJ_P0046293 Pigq protein_coding protein_coding MGP_129S1SvImJ_T0046294.1 MGP_129S1SvImJ_G0023382.1 mouse_genomes_project 17 25039072 25046239 - MGP_129S1SvImJ_P0046294 Pigq protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046295.1 MGP_129S1SvImJ_G0023382.1 mouse_genomes_project 17 25039179 25042705 - Pigq protein_coding retained_intron MGP_129S1SvImJ_T0046296.1 MGP_129S1SvImJ_G0023382.1 mouse_genomes_project 17 25039221 25048840 - MGP_129S1SvImJ_P0046296 Pigq protein_coding protein_coding MGP_129S1SvImJ_T0046297.1 MGP_129S1SvImJ_G0023382.1 mouse_genomes_project 17 25041360 25042445 - Pigq protein_coding retained_intron MGP_129S1SvImJ_T0046298.1 MGP_129S1SvImJ_G0023382.1 mouse_genomes_project 17 25045433 25054714 - Pigq protein_coding retained_intron MGP_129S1SvImJ_T0046299.1 MGP_129S1SvImJ_G0023382.1 mouse_genomes_project 17 25046516 25054712 - MGP_129S1SvImJ_P0046299 Pigq protein_coding protein_coding MGP_129S1SvImJ_T0046300.1 MGP_129S1SvImJ_G0023382.1 mouse_genomes_project 17 25049253 25054708 - Pigq protein_coding retained_intron MGP_129S1SvImJ_T0046301.1 MGP_129S1SvImJ_G0023382.1 mouse_genomes_project 17 25049859 25055639 - MGP_129S1SvImJ_P0046301 Pigq protein_coding protein_coding MGP_129S1SvImJ_T0046302.1 MGP_129S1SvImJ_G0023382.1 mouse_genomes_project 17 25049913 25057281 - MGP_129S1SvImJ_P0046302 Pigq protein_coding protein_coding MGP_129S1SvImJ_T0046303.1 MGP_129S1SvImJ_G0023382.1 mouse_genomes_project 17 25050042 25055609 - MGP_129S1SvImJ_P0046303 Pigq protein_coding protein_coding MGP_129S1SvImJ_T0046010.1 MGP_129S1SvImJ_G0023318.1 mouse_genomes_project 17 23731904 23736676 + MGP_129S1SvImJ_P0046010 Rps2 protein_coding protein_coding MGP_129S1SvImJ_T0046011.1 MGP_129S1SvImJ_G0023318.1 mouse_genomes_project 17 23733854 23736882 + MGP_129S1SvImJ_P0046011 Rps2 protein_coding protein_coding MGP_129S1SvImJ_T0046012.1 MGP_129S1SvImJ_G0023318.1 mouse_genomes_project 17 23734937 23736885 + MGP_129S1SvImJ_P0046012 Rps2 protein_coding protein_coding MGP_129S1SvImJ_T0046013.1 MGP_129S1SvImJ_G0023318.1 mouse_genomes_project 17 23735078 23736881 + MGP_129S1SvImJ_P0046013 Rps2 protein_coding protein_coding MGP_129S1SvImJ_T0046014.1 MGP_129S1SvImJ_G0023318.1 mouse_genomes_project 17 23735089 23736263 + Rps2 protein_coding retained_intron MGP_129S1SvImJ_T0046015.1 MGP_129S1SvImJ_G0023318.1 mouse_genomes_project 17 23735100 23736288 + Rps2 protein_coding retained_intron MGP_129S1SvImJ_T0046016.1 MGP_129S1SvImJ_G0023318.1 mouse_genomes_project 17 23736404 23736881 + Rps2 protein_coding retained_intron MGP_129S1SvImJ_T0048347.1 MGP_129S1SvImJ_G0023954.1 mouse_genomes_project 17 58835854 58845958 - MGP_129S1SvImJ_P0048347 Tubb4a protein_coding protein_coding MGP_129S1SvImJ_T0006980.1 MGP_129S1SvImJ_G0005746.1 mouse_genomes_project 17 61838609 61978219 - Gm29051 lincRNA lincRNA MGP_129S1SvImJ_T0046046.1 MGP_129S1SvImJ_G0023329.1 mouse_genomes_project 17 23913906 23920386 - MGP_129S1SvImJ_P0046046 Eme2 protein_coding protein_coding MGP_129S1SvImJ_T0046047.1 MGP_129S1SvImJ_G0023329.1 mouse_genomes_project 17 23917481 23920418 - MGP_129S1SvImJ_P0046047 Eme2 protein_coding protein_coding MGP_129S1SvImJ_T0046049.1 MGP_129S1SvImJ_G0023329.1 mouse_genomes_project 17 23917484 23920390 - MGP_129S1SvImJ_P0046049 Eme2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046050.1 MGP_129S1SvImJ_G0023329.1 mouse_genomes_project 17 23917809 23920409 - Eme2 protein_coding retained_intron MGP_129S1SvImJ_T0046051.1 MGP_129S1SvImJ_G0023329.1 mouse_genomes_project 17 23918109 23919515 - Eme2 protein_coding retained_intron MGP_129S1SvImJ_T0046052.1 MGP_129S1SvImJ_G0023329.1 mouse_genomes_project 17 23918468 23920386 - Eme2 protein_coding retained_intron MGP_129S1SvImJ_T0046053.1 MGP_129S1SvImJ_G0023329.1 mouse_genomes_project 17 23918691 23920393 - Eme2 protein_coding retained_intron MGP_129S1SvImJ_T0046054.1 MGP_129S1SvImJ_G0023329.1 mouse_genomes_project 17 23919076 23920356 - Eme2 protein_coding retained_intron MGP_129S1SvImJ_T0048773.1 MGP_129S1SvImJ_G0024105.1 mouse_genomes_project 17 91098564 91157068 + MGP_129S1SvImJ_P0048773 Msh2 protein_coding protein_coding MGP_129S1SvImJ_T0048774.1 MGP_129S1SvImJ_G0024105.1 mouse_genomes_project 17 91098774 91106702 + Msh2 protein_coding retained_intron MGP_129S1SvImJ_T0048775.1 MGP_129S1SvImJ_G0024105.1 mouse_genomes_project 17 91098795 91140068 + Msh2 protein_coding retained_intron MGP_129S1SvImJ_T0048776.1 MGP_129S1SvImJ_G0024105.1 mouse_genomes_project 17 91098843 91112362 + MGP_129S1SvImJ_P0048776 Msh2 protein_coding protein_coding MGP_129S1SvImJ_T0048777.1 MGP_129S1SvImJ_G0024105.1 mouse_genomes_project 17 91115915 91126595 + Msh2 protein_coding retained_intron MGP_129S1SvImJ_T0048778.1 MGP_129S1SvImJ_G0024105.1 mouse_genomes_project 17 91126432 91151095 + MGP_129S1SvImJ_P0048778 Msh2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0003803.1 MGP_129S1SvImJ_G0003419.1 mouse_genomes_project 17 66844437 66849684 - Gm17133 antisense antisense MGP_129S1SvImJ_T0048771.1 MGP_129S1SvImJ_G0024104.1 mouse_genomes_project 17 91055271 91073600 + MGP_129S1SvImJ_P0048771 Epcam protein_coding protein_coding MGP_129S1SvImJ_T0048772.1 MGP_129S1SvImJ_G0024104.1 mouse_genomes_project 17 91056105 91072968 + MGP_129S1SvImJ_P0048772 Epcam protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048705.1 MGP_129S1SvImJ_G0024081.1 mouse_genomes_project 17 87835897 87863923 - MGP_129S1SvImJ_P0048705 Abcg5 protein_coding protein_coding MGP_129S1SvImJ_T0048706.1 MGP_129S1SvImJ_G0024081.1 mouse_genomes_project 17 87836151 87863114 - MGP_129S1SvImJ_P0048706 Abcg5 protein_coding protein_coding MGP_129S1SvImJ_T0048707.1 MGP_129S1SvImJ_G0024081.1 mouse_genomes_project 17 87849667 87854116 - Abcg5 protein_coding processed_transcript MGP_129S1SvImJ_T0048708.1 MGP_129S1SvImJ_G0024081.1 mouse_genomes_project 17 87850145 87856196 - Abcg5 protein_coding retained_intron MGP_129S1SvImJ_T0045688.1 MGP_129S1SvImJ_G0023188.1 mouse_genomes_project 17 15894046 16003888 + MGP_129S1SvImJ_P0045688 Fpr3 protein_coding protein_coding MGP_129S1SvImJ_T0045690.1 MGP_129S1SvImJ_G0023188.1 mouse_genomes_project 17 16002681 16003888 + MGP_129S1SvImJ_P0045690 Fpr3 protein_coding protein_coding MGP_129S1SvImJ_T0045525.1 MGP_129S1SvImJ_G0023141.1 mouse_genomes_project 17 8002385 8446119 - MGP_129S1SvImJ_P0045525 Pacrg protein_coding protein_coding MGP_129S1SvImJ_T0045526.1 MGP_129S1SvImJ_G0023141.1 mouse_genomes_project 17 8176290 8230831 - Pacrg protein_coding processed_transcript MGP_129S1SvImJ_T0010244.1 MGP_129S1SvImJ_G0008360.1 mouse_genomes_project 17 93811728 93811834 + Gm24510 miRNA miRNA MGP_129S1SvImJ_T0047478.1 MGP_129S1SvImJ_G0023653.1 mouse_genomes_project 17 36017885 36027450 + MGP_129S1SvImJ_P0047478 Flot1 protein_coding protein_coding MGP_129S1SvImJ_T0047479.1 MGP_129S1SvImJ_G0023653.1 mouse_genomes_project 17 36018002 36027269 + MGP_129S1SvImJ_P0047479 Flot1 protein_coding protein_coding MGP_129S1SvImJ_T0047480.1 MGP_129S1SvImJ_G0023653.1 mouse_genomes_project 17 36018037 36024676 + MGP_129S1SvImJ_P0047480 Flot1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047481.1 MGP_129S1SvImJ_G0023653.1 mouse_genomes_project 17 36018081 36019058 + Flot1 protein_coding retained_intron MGP_129S1SvImJ_T0047482.1 MGP_129S1SvImJ_G0023653.1 mouse_genomes_project 17 36018181 36020403 + MGP_129S1SvImJ_P0047482 Flot1 protein_coding protein_coding MGP_129S1SvImJ_T0047483.1 MGP_129S1SvImJ_G0023653.1 mouse_genomes_project 17 36018204 36020415 + MGP_129S1SvImJ_P0047483 Flot1 protein_coding protein_coding MGP_129S1SvImJ_T0047484.1 MGP_129S1SvImJ_G0023653.1 mouse_genomes_project 17 36018248 36020402 + MGP_129S1SvImJ_P0047484 Flot1 protein_coding protein_coding MGP_129S1SvImJ_T0047485.1 MGP_129S1SvImJ_G0023653.1 mouse_genomes_project 17 36018655 36019588 + Flot1 protein_coding retained_intron MGP_129S1SvImJ_T0047486.1 MGP_129S1SvImJ_G0023653.1 mouse_genomes_project 17 36024737 36027285 + Flot1 protein_coding retained_intron MGP_129S1SvImJ_T0047487.1 MGP_129S1SvImJ_G0023653.1 mouse_genomes_project 17 36025152 36027299 + Flot1 protein_coding retained_intron MGP_129S1SvImJ_T0047488.1 MGP_129S1SvImJ_G0023653.1 mouse_genomes_project 17 36025291 36026122 + Flot1 protein_coding retained_intron MGP_129S1SvImJ_T0013233.1 MGP_129S1SvImJ_G0011322.1 mouse_genomes_project 17 9158784 9159078 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0047376.1 MGP_129S1SvImJ_G0023625.1 mouse_genomes_project 17 35316148 35317016 - Aif1 protein_coding retained_intron MGP_129S1SvImJ_T0047377.1 MGP_129S1SvImJ_G0023625.1 mouse_genomes_project 17 35316148 35317977 - MGP_129S1SvImJ_P0047377 Aif1 protein_coding protein_coding MGP_129S1SvImJ_T0047378.1 MGP_129S1SvImJ_G0023625.1 mouse_genomes_project 17 35316149 35321884 - MGP_129S1SvImJ_P0047378 Aif1 protein_coding protein_coding MGP_129S1SvImJ_T0047379.1 MGP_129S1SvImJ_G0023625.1 mouse_genomes_project 17 35316151 35318436 - MGP_129S1SvImJ_P0047379 Aif1 protein_coding protein_coding MGP_129S1SvImJ_T0047380.1 MGP_129S1SvImJ_G0023625.1 mouse_genomes_project 17 35316153 35321951 - Aif1 protein_coding processed_transcript MGP_129S1SvImJ_T0047381.1 MGP_129S1SvImJ_G0023625.1 mouse_genomes_project 17 35316680 35317789 - MGP_129S1SvImJ_P0047381 Aif1 protein_coding protein_coding MGP_129S1SvImJ_T0047382.1 MGP_129S1SvImJ_G0023625.1 mouse_genomes_project 17 35317687 35321884 - Aif1 protein_coding retained_intron MGP_129S1SvImJ_T0046788.1 MGP_129S1SvImJ_G0023499.1 mouse_genomes_project 17 32007148 32017635 - MGP_129S1SvImJ_P0046788 Ephx3 protein_coding protein_coding MGP_129S1SvImJ_T0046789.1 MGP_129S1SvImJ_G0023499.1 mouse_genomes_project 17 32007849 32017721 - MGP_129S1SvImJ_P0046789 Ephx3 protein_coding protein_coding MGP_129S1SvImJ_T0046749.1 MGP_129S1SvImJ_G0023490.1 mouse_genomes_project 17 31301023 31312174 + MGP_129S1SvImJ_P0046749 Ndufv3 protein_coding protein_coding MGP_129S1SvImJ_T0046750.1 MGP_129S1SvImJ_G0023490.1 mouse_genomes_project 17 31301058 31308690 + Ndufv3 protein_coding processed_transcript MGP_129S1SvImJ_T0046751.1 MGP_129S1SvImJ_G0023490.1 mouse_genomes_project 17 31301066 31312177 + MGP_129S1SvImJ_P0046751 Ndufv3 protein_coding protein_coding MGP_129S1SvImJ_T0046752.1 MGP_129S1SvImJ_G0023490.1 mouse_genomes_project 17 31301093 31308093 + MGP_129S1SvImJ_P0046752 Ndufv3 protein_coding protein_coding MGP_129S1SvImJ_T0046753.1 MGP_129S1SvImJ_G0023490.1 mouse_genomes_project 17 31309943 31312177 + Ndufv3 protein_coding processed_transcript MGP_129S1SvImJ_T0046936.1 MGP_129S1SvImJ_G0023538.1 mouse_genomes_project 17 33758639 33764105 - MGP_129S1SvImJ_P0046936 Rps28 protein_coding protein_coding MGP_129S1SvImJ_T0046939.1 MGP_129S1SvImJ_G0023538.1 mouse_genomes_project 17 33762648 33764175 - MGP_129S1SvImJ_P0046939 Rps28 protein_coding protein_coding MGP_129S1SvImJ_T0046940.1 MGP_129S1SvImJ_G0023538.1 mouse_genomes_project 17 33762649 33763959 - MGP_129S1SvImJ_P0046940 Rps28 protein_coding protein_coding MGP_129S1SvImJ_T0046941.1 MGP_129S1SvImJ_G0023538.1 mouse_genomes_project 17 33762662 33764078 - Rps28 protein_coding processed_transcript MGP_129S1SvImJ_T0046942.1 MGP_129S1SvImJ_G0023538.1 mouse_genomes_project 17 33762662 33764175 - MGP_129S1SvImJ_P0046942 Rps28 protein_coding protein_coding MGP_129S1SvImJ_T0046943.1 MGP_129S1SvImJ_G0023538.1 mouse_genomes_project 17 33762664 33764089 - MGP_129S1SvImJ_P0046943 Rps28 protein_coding protein_coding MGP_129S1SvImJ_T0046944.1 MGP_129S1SvImJ_G0023538.1 mouse_genomes_project 17 33763198 33764097 - Rps28 protein_coding retained_intron MGP_129S1SvImJ_T0047005.1 MGP_129S1SvImJ_G0023549.1 mouse_genomes_project 17 33905771 33918428 + MGP_129S1SvImJ_P0047005 Vps52 protein_coding protein_coding MGP_129S1SvImJ_T0047006.1 MGP_129S1SvImJ_G0023549.1 mouse_genomes_project 17 33908016 33910435 + Vps52 protein_coding retained_intron MGP_129S1SvImJ_T0047007.1 MGP_129S1SvImJ_G0023549.1 mouse_genomes_project 17 33908968 33910464 + Vps52 protein_coding retained_intron MGP_129S1SvImJ_T0047008.1 MGP_129S1SvImJ_G0023549.1 mouse_genomes_project 17 33911070 33912781 + Vps52 protein_coding retained_intron MGP_129S1SvImJ_T0047009.1 MGP_129S1SvImJ_G0023549.1 mouse_genomes_project 17 33912348 33917713 + Vps52 protein_coding retained_intron MGP_129S1SvImJ_T0046131.1 MGP_129S1SvImJ_G0023346.1 mouse_genomes_project 17 24291009 24293623 + MGP_129S1SvImJ_P0046131 Tsr3 protein_coding protein_coding MGP_129S1SvImJ_T0047732.1 MGP_129S1SvImJ_G0023744.1 mouse_genomes_project 17 39616967 39618800 + MGP_129S1SvImJ_P0047732 Esp24 protein_coding protein_coding MGP_129S1SvImJ_T0045695.1 MGP_129S1SvImJ_G0023194.1 mouse_genomes_project 17 16137041 19070330 + MGP_129S1SvImJ_P0045695 protein_coding protein_coding MGP_129S1SvImJ_T0048629.1 MGP_129S1SvImJ_G0024045.1 mouse_genomes_project 17 81756383 81760208 + MGP_129S1SvImJ_P0048629 Cebpzos protein_coding protein_coding MGP_129S1SvImJ_T0048630.1 MGP_129S1SvImJ_G0024045.1 mouse_genomes_project 17 81756400 81760208 + MGP_129S1SvImJ_P0048630 Cebpzos protein_coding protein_coding MGP_129S1SvImJ_T0048631.1 MGP_129S1SvImJ_G0024045.1 mouse_genomes_project 17 81756583 81758340 + MGP_129S1SvImJ_P0048631 Cebpzos protein_coding protein_coding MGP_129S1SvImJ_T0046814.1 MGP_129S1SvImJ_G0023504.1 mouse_genomes_project 17 32231137 32244110 - MGP_129S1SvImJ_P0046814 Rasal3 protein_coding protein_coding MGP_129S1SvImJ_T0046815.1 MGP_129S1SvImJ_G0023504.1 mouse_genomes_project 17 32231139 32244086 - MGP_129S1SvImJ_P0046815 Rasal3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046816.1 MGP_129S1SvImJ_G0023504.1 mouse_genomes_project 17 32231148 32244095 - Rasal3 protein_coding retained_intron MGP_129S1SvImJ_T0046817.1 MGP_129S1SvImJ_G0023504.1 mouse_genomes_project 17 32231395 32231987 - Rasal3 protein_coding retained_intron MGP_129S1SvImJ_T0046818.1 MGP_129S1SvImJ_G0023504.1 mouse_genomes_project 17 32231402 32244108 - MGP_129S1SvImJ_P0046818 Rasal3 protein_coding protein_coding MGP_129S1SvImJ_T0046819.1 MGP_129S1SvImJ_G0023504.1 mouse_genomes_project 17 32231451 32244064 - MGP_129S1SvImJ_P0046819 Rasal3 protein_coding protein_coding MGP_129S1SvImJ_T0046820.1 MGP_129S1SvImJ_G0023504.1 mouse_genomes_project 17 32233117 32234205 - Rasal3 protein_coding retained_intron MGP_129S1SvImJ_T0046821.1 MGP_129S1SvImJ_G0023504.1 mouse_genomes_project 17 32234401 32235850 - Rasal3 protein_coding retained_intron MGP_129S1SvImJ_T0046822.1 MGP_129S1SvImJ_G0023504.1 mouse_genomes_project 17 32236045 32237188 - Rasal3 protein_coding retained_intron MGP_129S1SvImJ_T0046823.1 MGP_129S1SvImJ_G0023504.1 mouse_genomes_project 17 32239272 32244108 - Rasal3 protein_coding retained_intron MGP_129S1SvImJ_T0045896.1 MGP_129S1SvImJ_G0023290.1 mouse_genomes_project 17 23117931 23144169 - MGP_129S1SvImJ_P0045896 Gm43796 protein_coding protein_coding MGP_129S1SvImJ_T0046309.1 MGP_129S1SvImJ_G0023386.1 mouse_genomes_project 17 25075851 25103219 - MGP_129S1SvImJ_P0046309 Capn15 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0046310.1 MGP_129S1SvImJ_G0023386.1 mouse_genomes_project 17 25077045 25103194 - MGP_129S1SvImJ_P0046310 Capn15 protein_coding protein_coding MGP_129S1SvImJ_T0047598.1 MGP_129S1SvImJ_G0023675.1 mouse_genomes_project 17 36729543 36731704 - MGP_129S1SvImJ_P0047598 H2-M10.3 protein_coding protein_coding MGP_129S1SvImJ_T0102306.1 MGP_129S1SvImJ_G0040140.1 mouse_genomes_project 17 21906217 21906578 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0048724.1 MGP_129S1SvImJ_G0024088.1 mouse_genomes_project 17 88866937 88878485 + MGP_129S1SvImJ_P0048724 Six3 protein_coding protein_coding MGP_129S1SvImJ_T0048725.1 MGP_129S1SvImJ_G0024088.1 mouse_genomes_project 17 88874135 88879453 + MGP_129S1SvImJ_P0048725 Six3 protein_coding protein_coding MGP_129S1SvImJ_T0048726.1 MGP_129S1SvImJ_G0024088.1 mouse_genomes_project 17 88874316 88882570 + MGP_129S1SvImJ_P0048726 Six3 protein_coding protein_coding MGP_129S1SvImJ_T0003743.1 MGP_129S1SvImJ_G0003374.1 mouse_genomes_project 17 22690541 22696689 + Gm16275 antisense antisense MGP_129S1SvImJ_T0102367.1 MGP_129S1SvImJ_G0040201.1 mouse_genomes_project 17 55374915 55375535 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0047159.1 MGP_129S1SvImJ_G0023582.1 mouse_genomes_project 17 34692100 34694072 - Egfl8 protein_coding retained_intron MGP_129S1SvImJ_T0047160.1 MGP_129S1SvImJ_G0023582.1 mouse_genomes_project 17 34692101 34694723 - MGP_129S1SvImJ_P0047160 Egfl8 protein_coding protein_coding MGP_129S1SvImJ_T0047161.1 MGP_129S1SvImJ_G0023582.1 mouse_genomes_project 17 34692105 34694723 - MGP_129S1SvImJ_P0047161 Egfl8 protein_coding protein_coding MGP_129S1SvImJ_T0047162.1 MGP_129S1SvImJ_G0023582.1 mouse_genomes_project 17 34692528 34694540 - MGP_129S1SvImJ_P0047162 Egfl8 protein_coding protein_coding MGP_129S1SvImJ_T0047163.1 MGP_129S1SvImJ_G0023582.1 mouse_genomes_project 17 34692915 34694708 - Egfl8 protein_coding retained_intron MGP_129S1SvImJ_T0047164.1 MGP_129S1SvImJ_G0023582.1 mouse_genomes_project 17 34693520 34694073 - Egfl8 protein_coding retained_intron MGP_129S1SvImJ_T0102286.1 MGP_129S1SvImJ_G0040120.1 mouse_genomes_project 17 17253886 17255200 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0045560.1 MGP_129S1SvImJ_G0023152.1 mouse_genomes_project 17 10557593 10579242 - MGP_129S1SvImJ_P0045560 Pnldc1 protein_coding protein_coding MGP_129S1SvImJ_T0047757.1 MGP_129S1SvImJ_G0023765.1 mouse_genomes_project 17 41749525 41776452 + MGP_129S1SvImJ_P0047757 Mut protein_coding protein_coding MGP_129S1SvImJ_T0045996.1 MGP_129S1SvImJ_G0023315.1 mouse_genomes_project 17 23706984 23711286 + MGP_129S1SvImJ_P0045996 Noxo1 protein_coding protein_coding MGP_129S1SvImJ_T0045998.1 MGP_129S1SvImJ_G0023315.1 mouse_genomes_project 17 23708779 23709112 + Noxo1 protein_coding processed_transcript MGP_129S1SvImJ_T0045999.1 MGP_129S1SvImJ_G0023315.1 mouse_genomes_project 17 23708932 23710159 + Noxo1 protein_coding processed_transcript MGP_129S1SvImJ_T0046000.1 MGP_129S1SvImJ_G0023315.1 mouse_genomes_project 17 23708989 23711282 + Noxo1 protein_coding retained_intron MGP_129S1SvImJ_T0046001.1 MGP_129S1SvImJ_G0023315.1 mouse_genomes_project 17 23708995 23711070 + Noxo1 protein_coding retained_intron MGP_129S1SvImJ_T0046002.1 MGP_129S1SvImJ_G0023315.1 mouse_genomes_project 17 23709068 23709923 + Noxo1 protein_coding retained_intron MGP_129S1SvImJ_T0046003.1 MGP_129S1SvImJ_G0023315.1 mouse_genomes_project 17 23709097 23710435 + Noxo1 protein_coding processed_transcript MGP_129S1SvImJ_T0046004.1 MGP_129S1SvImJ_G0023315.1 mouse_genomes_project 17 23709282 23711281 + Noxo1 protein_coding processed_transcript MGP_129S1SvImJ_T0046005.1 MGP_129S1SvImJ_G0023315.1 mouse_genomes_project 17 23710149 23711273 + Noxo1 protein_coding processed_transcript MGP_129S1SvImJ_T0010191.1 MGP_129S1SvImJ_G0008307.1 mouse_genomes_project 17 15836900 15836968 + Mir125a miRNA miRNA MGP_129S1SvImJ_T0098331.1 MGP_129S1SvImJ_G0036416.1 mouse_genomes_project 17 33348250 33349620 + pseudogene pseudogene MGP_129S1SvImJ_T0048029.1 MGP_129S1SvImJ_G0023847.1 mouse_genomes_project 17 48675870 48797660 + MGP_129S1SvImJ_P0048029 Ccnd3 protein_coding protein_coding MGP_129S1SvImJ_T0048030.1 MGP_129S1SvImJ_G0023847.1 mouse_genomes_project 17 48675898 48797055 + MGP_129S1SvImJ_P0048030 Ccnd3 protein_coding protein_coding MGP_129S1SvImJ_T0048031.1 MGP_129S1SvImJ_G0023847.1 mouse_genomes_project 17 48675975 48798216 + MGP_129S1SvImJ_P0048031 Ccnd3 protein_coding protein_coding MGP_129S1SvImJ_T0048032.1 MGP_129S1SvImJ_G0023847.1 mouse_genomes_project 17 48675981 48761231 + Ccnd3 protein_coding retained_intron MGP_129S1SvImJ_T0048033.1 MGP_129S1SvImJ_G0023847.1 mouse_genomes_project 17 48676038 48761631 + Ccnd3 protein_coding retained_intron MGP_129S1SvImJ_T0048034.1 MGP_129S1SvImJ_G0023847.1 mouse_genomes_project 17 48676050 48791364 + MGP_129S1SvImJ_P0048034 Ccnd3 protein_coding protein_coding MGP_129S1SvImJ_T0048035.1 MGP_129S1SvImJ_G0023847.1 mouse_genomes_project 17 48676059 48761403 + Ccnd3 protein_coding retained_intron MGP_129S1SvImJ_T0048036.1 MGP_129S1SvImJ_G0023847.1 mouse_genomes_project 17 48676060 48678729 + Ccnd3 protein_coding retained_intron MGP_129S1SvImJ_T0048037.1 MGP_129S1SvImJ_G0023847.1 mouse_genomes_project 17 48676060 48798238 + MGP_129S1SvImJ_P0048037 Ccnd3 protein_coding protein_coding MGP_129S1SvImJ_T0048038.1 MGP_129S1SvImJ_G0023847.1 mouse_genomes_project 17 48791015 48797764 + Ccnd3 protein_coding retained_intron MGP_129S1SvImJ_T0048039.1 MGP_129S1SvImJ_G0023847.1 mouse_genomes_project 17 48791108 48797169 + MGP_129S1SvImJ_P0048039 Ccnd3 protein_coding protein_coding MGP_129S1SvImJ_T0048040.1 MGP_129S1SvImJ_G0023847.1 mouse_genomes_project 17 48791234 48799286 + MGP_129S1SvImJ_P0048040 Ccnd3 protein_coding protein_coding MGP_129S1SvImJ_T0048041.1 MGP_129S1SvImJ_G0023847.1 mouse_genomes_project 17 48791892 48797085 + MGP_129S1SvImJ_P0048041 Ccnd3 protein_coding protein_coding MGP_129S1SvImJ_T0048042.1 MGP_129S1SvImJ_G0023847.1 mouse_genomes_project 17 48792335 48798452 + MGP_129S1SvImJ_P0048042 Ccnd3 protein_coding protein_coding MGP_129S1SvImJ_T0045664.1 MGP_129S1SvImJ_G0023179.1 mouse_genomes_project 17 13673844 13695135 - MGP_129S1SvImJ_P0045664 Rgmb protein_coding protein_coding MGP_129S1SvImJ_T0046848.1 MGP_129S1SvImJ_G0023515.1 mouse_genomes_project 17 32796555 32809178 - MGP_129S1SvImJ_P0046848 Cyp4f14 protein_coding protein_coding MGP_129S1SvImJ_T0046849.1 MGP_129S1SvImJ_G0023515.1 mouse_genomes_project 17 32796555 32808923 - MGP_129S1SvImJ_P0046849 Cyp4f14 protein_coding protein_coding MGP_129S1SvImJ_T0045848.1 MGP_129S1SvImJ_G0023274.1 mouse_genomes_project 17 22763680 22766064 - MGP_129S1SvImJ_P0045848 Prss33 protein_coding protein_coding MGP_129S1SvImJ_T0045849.1 MGP_129S1SvImJ_G0023274.1 mouse_genomes_project 17 22764060 22766060 - MGP_129S1SvImJ_P0045849 Prss33 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045850.1 MGP_129S1SvImJ_G0023274.1 mouse_genomes_project 17 22764988 22766377 - Prss33 protein_coding retained_intron MGP_129S1SvImJ_T0048441.1 MGP_129S1SvImJ_G0023988.1 mouse_genomes_project 17 68715889 68742273 - MGP_129S1SvImJ_P0048441 Rab12 protein_coding protein_coding MGP_129S1SvImJ_T0048442.1 MGP_129S1SvImJ_G0023988.1 mouse_genomes_project 17 68718868 68721698 - Rab12 protein_coding retained_intron MGP_129S1SvImJ_T0048443.1 MGP_129S1SvImJ_G0023988.1 mouse_genomes_project 17 68721727 68741936 - Rab12 protein_coding processed_transcript MGP_129S1SvImJ_T0048444.1 MGP_129S1SvImJ_G0023988.1 mouse_genomes_project 17 68728343 68742269 - Rab12 protein_coding retained_intron MGP_129S1SvImJ_T0046369.1 MGP_129S1SvImJ_G0023398.1 mouse_genomes_project 17 25447653 25448436 - MGP_129S1SvImJ_P0046369 protein_coding protein_coding MGP_129S1SvImJ_T0046371.1 MGP_129S1SvImJ_G0023398.1 mouse_genomes_project 17 25447694 25448300 - protein_coding retained_intron MGP_129S1SvImJ_T0048656.1 MGP_129S1SvImJ_G0024056.1 mouse_genomes_project 17 83022714 83092759 + MGP_129S1SvImJ_P0048656 Galm protein_coding protein_coding MGP_129S1SvImJ_T0048657.1 MGP_129S1SvImJ_G0024056.1 mouse_genomes_project 17 83042155 83089279 + MGP_129S1SvImJ_P0048657 Galm protein_coding protein_coding MGP_129S1SvImJ_T0047743.1 MGP_129S1SvImJ_G0023755.1 mouse_genomes_project 17 41375338 41380828 + MGP_129S1SvImJ_P0047743 Esp6 protein_coding protein_coding MGP_129S1SvImJ_T0006964.1 MGP_129S1SvImJ_G0005738.1 mouse_genomes_project 17 47523118 47923730 + lincRNA lincRNA MGP_129S1SvImJ_T0047794.1 MGP_129S1SvImJ_G0023783.1 mouse_genomes_project 17 45118188 45214514 + MGP_129S1SvImJ_P0047794 Clic5 protein_coding protein_coding MGP_129S1SvImJ_T0048496.1 MGP_129S1SvImJ_G0024003.1 mouse_genomes_project 17 73418812 73431813 - MGP_129S1SvImJ_P0048496 Myl12a protein_coding protein_coding MGP_129S1SvImJ_T0048497.1 MGP_129S1SvImJ_G0024003.1 mouse_genomes_project 17 73419451 73431424 - Myl12a protein_coding retained_intron MGP_129S1SvImJ_T0048498.1 MGP_129S1SvImJ_G0024003.1 mouse_genomes_project 17 73419451 73425461 - MGP_129S1SvImJ_P0048498 Myl12a protein_coding protein_coding MGP_129S1SvImJ_T0048499.1 MGP_129S1SvImJ_G0024003.1 mouse_genomes_project 17 73419706 73432137 - MGP_129S1SvImJ_P0048499 Myl12a protein_coding protein_coding MGP_129S1SvImJ_T0048500.1 MGP_129S1SvImJ_G0024003.1 mouse_genomes_project 17 73421292 73431446 - MGP_129S1SvImJ_P0048500 Myl12a protein_coding protein_coding MGP_129S1SvImJ_T0048501.1 MGP_129S1SvImJ_G0024003.1 mouse_genomes_project 17 73421543 73431419 - Myl12a protein_coding retained_intron MGP_129S1SvImJ_T0048502.1 MGP_129S1SvImJ_G0024003.1 mouse_genomes_project 17 73421864 73431276 - MGP_129S1SvImJ_P0048502 Myl12a protein_coding protein_coding MGP_129S1SvImJ_T0102284.1 MGP_129S1SvImJ_G0040118.1 mouse_genomes_project 17 16623274 16624554 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0011458.1 MGP_129S1SvImJ_G0009574.1 mouse_genomes_project 17 88865242 88866934 + Gm27801 misc_RNA misc_RNA MGP_129S1SvImJ_T0046017.1 MGP_129S1SvImJ_G0023319.1 mouse_genomes_project 17 23737016 23737602 - Ndufb10 protein_coding retained_intron MGP_129S1SvImJ_T0046018.1 MGP_129S1SvImJ_G0023319.1 mouse_genomes_project 17 23737016 23737859 - Ndufb10 protein_coding retained_intron MGP_129S1SvImJ_T0046019.1 MGP_129S1SvImJ_G0023319.1 mouse_genomes_project 17 23737016 23739362 - Ndufb10 protein_coding retained_intron MGP_129S1SvImJ_T0046020.1 MGP_129S1SvImJ_G0023319.1 mouse_genomes_project 17 23737016 23739420 - MGP_129S1SvImJ_P0046020 Ndufb10 protein_coding protein_coding MGP_129S1SvImJ_T0046021.1 MGP_129S1SvImJ_G0023319.1 mouse_genomes_project 17 23737357 23739354 - MGP_129S1SvImJ_P0046021 Ndufb10 protein_coding protein_coding MGP_129S1SvImJ_T0046022.1 MGP_129S1SvImJ_G0023319.1 mouse_genomes_project 17 23737634 23739336 - Ndufb10 protein_coding processed_transcript MGP_129S1SvImJ_T0048125.1 MGP_129S1SvImJ_G0023871.1 mouse_genomes_project 17 49673894 49702119 - MGP_129S1SvImJ_P0048125 Nfya protein_coding protein_coding MGP_129S1SvImJ_T0048126.1 MGP_129S1SvImJ_G0023871.1 mouse_genomes_project 17 49673898 49702260 - MGP_129S1SvImJ_P0048126 Nfya protein_coding protein_coding MGP_129S1SvImJ_T0048127.1 MGP_129S1SvImJ_G0023871.1 mouse_genomes_project 17 49673905 49702119 - MGP_129S1SvImJ_P0048127 Nfya protein_coding protein_coding MGP_129S1SvImJ_T0048128.1 MGP_129S1SvImJ_G0023871.1 mouse_genomes_project 17 49676026 49687558 - MGP_129S1SvImJ_P0048128 Nfya protein_coding protein_coding MGP_129S1SvImJ_T0048129.1 MGP_129S1SvImJ_G0023871.1 mouse_genomes_project 17 49676102 49702084 - MGP_129S1SvImJ_P0048129 Nfya protein_coding protein_coding MGP_129S1SvImJ_T0048130.1 MGP_129S1SvImJ_G0023871.1 mouse_genomes_project 17 49676130 49680238 - MGP_129S1SvImJ_P0048130 Nfya protein_coding protein_coding MGP_129S1SvImJ_T0048131.1 MGP_129S1SvImJ_G0023871.1 mouse_genomes_project 17 49676245 49680474 - MGP_129S1SvImJ_P0048131 Nfya protein_coding protein_coding MGP_129S1SvImJ_T0048132.1 MGP_129S1SvImJ_G0023871.1 mouse_genomes_project 17 49677894 49679160 - Nfya protein_coding retained_intron MGP_129S1SvImJ_T0048133.1 MGP_129S1SvImJ_G0023871.1 mouse_genomes_project 17 49679030 49686052 - MGP_129S1SvImJ_P0048133 Nfya protein_coding protein_coding MGP_129S1SvImJ_T0048134.1 MGP_129S1SvImJ_G0023871.1 mouse_genomes_project 17 49679058 49702095 - MGP_129S1SvImJ_P0048134 Nfya protein_coding protein_coding MGP_129S1SvImJ_T0048135.1 MGP_129S1SvImJ_G0023871.1 mouse_genomes_project 17 49680232 49683068 - Nfya protein_coding retained_intron MGP_129S1SvImJ_T0048136.1 MGP_129S1SvImJ_G0023871.1 mouse_genomes_project 17 49682376 49702042 - Nfya protein_coding retained_intron MGP_129S1SvImJ_T0048137.1 MGP_129S1SvImJ_G0023871.1 mouse_genomes_project 17 49684940 49702104 - Nfya protein_coding retained_intron MGP_129S1SvImJ_T0045712.1 MGP_129S1SvImJ_G0023211.1 mouse_genomes_project 17 19240125 19267579 - MGP_129S1SvImJ_P0045712 protein_coding protein_coding MGP_129S1SvImJ_T0048051.1 MGP_129S1SvImJ_G0023851.1 mouse_genomes_project 17 48832931 48896551 + MGP_129S1SvImJ_P0048051 Usp49 protein_coding protein_coding MGP_129S1SvImJ_T0048052.1 MGP_129S1SvImJ_G0023851.1 mouse_genomes_project 17 48854980 48879539 + MGP_129S1SvImJ_P0048052 Usp49 protein_coding protein_coding MGP_129S1SvImJ_T0048053.1 MGP_129S1SvImJ_G0023851.1 mouse_genomes_project 17 48880074 48889714 + MGP_129S1SvImJ_P0048053 Usp49 protein_coding protein_coding MGP_129S1SvImJ_T0048054.1 MGP_129S1SvImJ_G0023851.1 mouse_genomes_project 17 48880655 48889386 + MGP_129S1SvImJ_P0048054 Usp49 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0010218.1 MGP_129S1SvImJ_G0008334.1 mouse_genomes_project 17 33994450 33994510 + Mir219c miRNA miRNA MGP_129S1SvImJ_T0047425.1 MGP_129S1SvImJ_G0023642.1 mouse_genomes_project 17 35685548 35703019 + MGP_129S1SvImJ_P0047425 Cchcr1 protein_coding protein_coding MGP_129S1SvImJ_T0047426.1 MGP_129S1SvImJ_G0023642.1 mouse_genomes_project 17 35685564 35688868 + Cchcr1 protein_coding retained_intron MGP_129S1SvImJ_T0047427.1 MGP_129S1SvImJ_G0023642.1 mouse_genomes_project 17 35685624 35703038 + MGP_129S1SvImJ_P0047427 Cchcr1 protein_coding protein_coding MGP_129S1SvImJ_T0047428.1 MGP_129S1SvImJ_G0023642.1 mouse_genomes_project 17 35685911 35703028 + MGP_129S1SvImJ_P0047428 Cchcr1 protein_coding protein_coding MGP_129S1SvImJ_T0047429.1 MGP_129S1SvImJ_G0023642.1 mouse_genomes_project 17 35688190 35689499 + Cchcr1 protein_coding processed_transcript MGP_129S1SvImJ_T0047430.1 MGP_129S1SvImJ_G0023642.1 mouse_genomes_project 17 35696722 35697475 + Cchcr1 protein_coding retained_intron MGP_129S1SvImJ_T0047431.1 MGP_129S1SvImJ_G0023642.1 mouse_genomes_project 17 35700918 35701456 + Cchcr1 protein_coding retained_intron MGP_129S1SvImJ_T0047739.1 MGP_129S1SvImJ_G0023751.1 mouse_genomes_project 17 40996771 40998363 - MGP_129S1SvImJ_P0047739 Pgk2 protein_coding protein_coding MGP_129S1SvImJ_T0098335.1 MGP_129S1SvImJ_G0036420.1 mouse_genomes_project 17 83674411 83674803 + pseudogene pseudogene MGP_129S1SvImJ_T0102315.1 MGP_129S1SvImJ_G0040149.1 mouse_genomes_project 17 33912750 36325683 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0045717.1 MGP_129S1SvImJ_G0023216.1 mouse_genomes_project 17 19545503 19546454 + MGP_129S1SvImJ_P0045717 Vmn1r230 protein_coding protein_coding MGP_129S1SvImJ_T0047953.1 MGP_129S1SvImJ_G0023816.1 mouse_genomes_project 17 47490698 47491226 - MGP_129S1SvImJ_P0047953 protein_coding protein_coding MGP_129S1SvImJ_T0006996.1 MGP_129S1SvImJ_G0005757.1 mouse_genomes_project 17 86965279 86967890 - C430042M11Rik lincRNA lincRNA MGP_129S1SvImJ_T0045897.1 MGP_129S1SvImJ_G0023291.1 mouse_genomes_project 17 23117932 23120789 - Atp6v0c protein_coding processed_transcript MGP_129S1SvImJ_T0045898.1 MGP_129S1SvImJ_G0023291.1 mouse_genomes_project 17 23117932 23123227 - MGP_129S1SvImJ_P0045898 Atp6v0c protein_coding protein_coding MGP_129S1SvImJ_T0045899.1 MGP_129S1SvImJ_G0023291.1 mouse_genomes_project 17 23118219 23123443 - MGP_129S1SvImJ_P0045899 Atp6v0c protein_coding protein_coding MGP_129S1SvImJ_T0045900.1 MGP_129S1SvImJ_G0023291.1 mouse_genomes_project 17 23118486 23123414 - MGP_129S1SvImJ_P0045900 Atp6v0c protein_coding protein_coding MGP_129S1SvImJ_T0045901.1 MGP_129S1SvImJ_G0023291.1 mouse_genomes_project 17 23118604 23122832 - Atp6v0c protein_coding processed_transcript MGP_129S1SvImJ_T0045902.1 MGP_129S1SvImJ_G0023291.1 mouse_genomes_project 17 23118608 23123468 - MGP_129S1SvImJ_P0045902 Atp6v0c protein_coding protein_coding MGP_129S1SvImJ_T0045452.1 MGP_129S1SvImJ_G0023116.1 mouse_genomes_project 17 3907625 3982081 + MGP_129S1SvImJ_P0045452 protein_coding protein_coding MGP_129S1SvImJ_T0045453.1 MGP_129S1SvImJ_G0023116.1 mouse_genomes_project 17 3916386 3978313 + protein_coding retained_intron MGP_129S1SvImJ_T0045454.1 MGP_129S1SvImJ_G0023116.1 mouse_genomes_project 17 3916782 3981875 + MGP_129S1SvImJ_P0045454 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045455.1 MGP_129S1SvImJ_G0023116.1 mouse_genomes_project 17 3917001 3981875 + MGP_129S1SvImJ_P0045455 protein_coding protein_coding MGP_129S1SvImJ_T0006908.1 MGP_129S1SvImJ_G0005692.1 mouse_genomes_project 17 12895199 12904331 + Gm28873 lincRNA lincRNA MGP_129S1SvImJ_T0017593.1 MGP_129S1SvImJ_G0015348.1 mouse_genomes_project 17 33995472 34001011 - Gm20427 processed_transcript retained_intron MGP_129S1SvImJ_T0048567.1 MGP_129S1SvImJ_G0024027.1 mouse_genomes_project 17 76962694 77020184 + MGP_129S1SvImJ_P0048567 Spast protein_coding protein_coding MGP_129S1SvImJ_T0048568.1 MGP_129S1SvImJ_G0024027.1 mouse_genomes_project 17 76962744 77020185 + MGP_129S1SvImJ_P0048568 Spast protein_coding unknown_likely_coding MGP_129S1SvImJ_T0046829.1 MGP_129S1SvImJ_G0023508.1 mouse_genomes_project 17 32369000 32408015 + MGP_129S1SvImJ_P0046829 Cyp4f16 protein_coding protein_coding MGP_129S1SvImJ_T0046830.1 MGP_129S1SvImJ_G0023508.1 mouse_genomes_project 17 32389262 32392287 + Cyp4f16 protein_coding retained_intron MGP_129S1SvImJ_T0046831.1 MGP_129S1SvImJ_G0023508.1 mouse_genomes_project 17 32389583 32406868 + Cyp4f16 protein_coding retained_intron MGP_129S1SvImJ_T0046832.1 MGP_129S1SvImJ_G0023508.1 mouse_genomes_project 17 32393644 32407493 + Cyp4f16 protein_coding retained_intron MGP_129S1SvImJ_T0045440.1 MGP_129S1SvImJ_G0023111.1 mouse_genomes_project 17 3270099 3301780 + Tulp4 protein_coding processed_transcript MGP_129S1SvImJ_T0045441.1 MGP_129S1SvImJ_G0023111.1 mouse_genomes_project 17 3270141 3374605 + MGP_129S1SvImJ_P0045441 Tulp4 protein_coding protein_coding MGP_129S1SvImJ_T0045442.1 MGP_129S1SvImJ_G0023111.1 mouse_genomes_project 17 3285979 3288566 + Tulp4 protein_coding processed_transcript MGP_129S1SvImJ_T0045443.1 MGP_129S1SvImJ_G0023111.1 mouse_genomes_project 17 3300198 3301777 + Tulp4 protein_coding processed_transcript MGP_129S1SvImJ_T0045444.1 MGP_129S1SvImJ_G0023111.1 mouse_genomes_project 17 3301135 3398891 + Tulp4 protein_coding retained_intron MGP_129S1SvImJ_T0045445.1 MGP_129S1SvImJ_G0023111.1 mouse_genomes_project 17 3301135 3416680 + MGP_129S1SvImJ_P0045445 Tulp4 protein_coding protein_coding MGP_129S1SvImJ_T0045446.1 MGP_129S1SvImJ_G0023111.1 mouse_genomes_project 17 3342612 3416684 + MGP_129S1SvImJ_P0045446 Tulp4 protein_coding protein_coding MGP_129S1SvImJ_T0047577.1 MGP_129S1SvImJ_G0023668.1 mouse_genomes_project 17 36259385 36360184 - protein_coding retained_intron MGP_129S1SvImJ_T0048222.1 MGP_129S1SvImJ_G0023904.1 mouse_genomes_project 17 57593018 57599169 + MGP_129S1SvImJ_P0048222 Shd protein_coding protein_coding MGP_129S1SvImJ_T0048223.1 MGP_129S1SvImJ_G0023904.1 mouse_genomes_project 17 57593064 57599181 + MGP_129S1SvImJ_P0048223 Shd protein_coding unknown_likely_coding MGP_129S1SvImJ_T0001011.1 MGP_129S1SvImJ_G0000940.1 mouse_genomes_project 17 53237876 53242069 - TEC TEC MGP_129S1SvImJ_T0100836.1 MGP_129S1SvImJ_G0038903.1 mouse_genomes_project 17 74097105 74097190 + Snord92 snoRNA snoRNA MGP_129S1SvImJ_T0045689.1 MGP_129S1SvImJ_G0023189.1 mouse_genomes_project 17 15929717 15930626 - MGP_129S1SvImJ_P0045689 Gm7535 protein_coding protein_coding MGP_129S1SvImJ_T0048384.1 MGP_129S1SvImJ_G0023972.1 mouse_genomes_project 17 65916473 66212722 + MGP_129S1SvImJ_P0048384 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048385.1 MGP_129S1SvImJ_G0023972.1 mouse_genomes_project 17 65991789 66213199 + MGP_129S1SvImJ_P0048385 protein_coding protein_coding MGP_129S1SvImJ_T0048611.1 MGP_129S1SvImJ_G0024037.1 mouse_genomes_project 17 81194512 81237822 - MGP_129S1SvImJ_P0048611 Fez2 protein_coding protein_coding MGP_129S1SvImJ_T0048612.1 MGP_129S1SvImJ_G0024037.1 mouse_genomes_project 17 81194512 81237822 - MGP_129S1SvImJ_P0048612 Fez2 protein_coding protein_coding MGP_129S1SvImJ_T0047816.1 MGP_129S1SvImJ_G0023789.1 mouse_genomes_project 17 46539998 46560185 + MGP_129S1SvImJ_P0047816 Tcte1 protein_coding protein_coding MGP_129S1SvImJ_T0010186.1 MGP_129S1SvImJ_G0008302.1 mouse_genomes_project 17 4142712 4142821 - Mir692-1 miRNA miRNA MGP_129S1SvImJ_T0048043.1 MGP_129S1SvImJ_G0023848.1 mouse_genomes_project 17 48798919 48811034 - MGP_129S1SvImJ_P0048043 Bysl protein_coding protein_coding MGP_129S1SvImJ_T0003770.1 MGP_129S1SvImJ_G0003393.1 mouse_genomes_project 17 34058075 34069229 - BC051537 antisense antisense MGP_129S1SvImJ_T0046222.1 MGP_129S1SvImJ_G0023367.1 mouse_genomes_project 17 24882673 24886570 + MGP_129S1SvImJ_P0046222 Ccdc78 protein_coding protein_coding MGP_129S1SvImJ_T0046223.1 MGP_129S1SvImJ_G0023367.1 mouse_genomes_project 17 24882709 24886306 + MGP_129S1SvImJ_P0046223 Ccdc78 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0045714.1 MGP_129S1SvImJ_G0023213.1 mouse_genomes_project 17 19387971 19388868 + MGP_129S1SvImJ_P0045714 Vmn1r226 protein_coding protein_coding MGP_129S1SvImJ_T0046714.1 MGP_129S1SvImJ_G0023483.1 mouse_genomes_project 17 30901099 30904762 - MGP_129S1SvImJ_P0046714 Tff1 protein_coding protein_coding MGP_129S1SvImJ_T0046132.1 MGP_129S1SvImJ_G0023347.1 mouse_genomes_project 17 24293483 24294860 - Baiap3 protein_coding retained_intron MGP_129S1SvImJ_T0046133.1 MGP_129S1SvImJ_G0023347.1 mouse_genomes_project 17 24293483 24307173 - MGP_129S1SvImJ_P0046133 Baiap3 protein_coding protein_coding MGP_129S1SvImJ_T0046134.1 MGP_129S1SvImJ_G0023347.1 mouse_genomes_project 17 24294181 24304748 - MGP_129S1SvImJ_P0046134 Baiap3 protein_coding protein_coding MGP_129S1SvImJ_T0046135.1 MGP_129S1SvImJ_G0023347.1 mouse_genomes_project 17 24294196 24295138 - MGP_129S1SvImJ_P0046135 Baiap3 protein_coding protein_coding MGP_129S1SvImJ_T0046136.1 MGP_129S1SvImJ_G0023347.1 mouse_genomes_project 17 24294205 24307090 - MGP_129S1SvImJ_P0046136 Baiap3 protein_coding protein_coding MGP_129S1SvImJ_T0046137.1 MGP_129S1SvImJ_G0023347.1 mouse_genomes_project 17 24294348 24307090 - MGP_129S1SvImJ_P0046137 Baiap3 protein_coding protein_coding MGP_129S1SvImJ_T0046138.1 MGP_129S1SvImJ_G0023347.1 mouse_genomes_project 17 24295617 24296609 - Baiap3 protein_coding retained_intron MGP_129S1SvImJ_T0046139.1 MGP_129S1SvImJ_G0023347.1 mouse_genomes_project 17 24296838 24298936 - Baiap3 protein_coding retained_intron MGP_129S1SvImJ_T0046140.1 MGP_129S1SvImJ_G0023347.1 mouse_genomes_project 17 24301821 24307083 - Baiap3 protein_coding retained_intron MGP_129S1SvImJ_T0048633.1 MGP_129S1SvImJ_G0024047.1 mouse_genomes_project 17 81777112 81789748 + MGP_129S1SvImJ_P0048633 Ndufaf7 protein_coding protein_coding MGP_129S1SvImJ_T0010199.1 MGP_129S1SvImJ_G0008315.1 mouse_genomes_project 17 24841552 24841644 - Gm25083 miRNA miRNA MGP_129S1SvImJ_T0047784.1 MGP_129S1SvImJ_G0023778.1 mouse_genomes_project 17 44543351 44568888 - MGP_129S1SvImJ_P0047784 Slc25a27 protein_coding protein_coding MGP_129S1SvImJ_T0013230.1 MGP_129S1SvImJ_G0011319.1 mouse_genomes_project 17 6250683 6251239 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0045474.1 MGP_129S1SvImJ_G0023128.1 mouse_genomes_project 17 5585987 5614417 - MGP_129S1SvImJ_P0045474 protein_coding protein_coding MGP_129S1SvImJ_T0047636.1 MGP_129S1SvImJ_G0023690.1 mouse_genomes_project 17 37315911 37323949 + MGP_129S1SvImJ_P0047636 Znrd1as protein_coding protein_coding MGP_129S1SvImJ_T0047637.1 MGP_129S1SvImJ_G0023690.1 mouse_genomes_project 17 37315938 37323243 + Znrd1as protein_coding retained_intron MGP_129S1SvImJ_T0047638.1 MGP_129S1SvImJ_G0023690.1 mouse_genomes_project 17 37315960 37323948 + MGP_129S1SvImJ_P0047638 Znrd1as protein_coding protein_coding MGP_129S1SvImJ_T0102316.1 MGP_129S1SvImJ_G0040150.1 mouse_genomes_project 17 34058904 34060056 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0006988.1 MGP_129S1SvImJ_G0005750.1 mouse_genomes_project 17 73140153 73150320 - 5031415H12Rik lincRNA lincRNA MGP_129S1SvImJ_T0045715.1 MGP_129S1SvImJ_G0023214.1 mouse_genomes_project 17 19477625 19479068 - MGP_129S1SvImJ_P0045715 Vmn1r228 protein_coding protein_coding MGP_129S1SvImJ_T0045449.1 MGP_129S1SvImJ_G0023114.1 mouse_genomes_project 17 3620488 3626852 + MGP_129S1SvImJ_P0045449 protein_coding protein_coding MGP_129S1SvImJ_T0006963.1 MGP_129S1SvImJ_G0005737.1 mouse_genomes_project 17 47319838 47327329 + Gm26785 lincRNA lincRNA MGP_129S1SvImJ_T0046048.1 MGP_129S1SvImJ_G0023330.1 mouse_genomes_project 17 23917482 23963792 - MGP_129S1SvImJ_P0046048 Mapk8ip3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046063.1 MGP_129S1SvImJ_G0023330.1 mouse_genomes_project 17 23922845 23963831 - MGP_129S1SvImJ_P0046063 Mapk8ip3 protein_coding protein_coding MGP_129S1SvImJ_T0046064.1 MGP_129S1SvImJ_G0023330.1 mouse_genomes_project 17 23922845 23963831 - MGP_129S1SvImJ_P0046064 Mapk8ip3 protein_coding protein_coding MGP_129S1SvImJ_T0046065.1 MGP_129S1SvImJ_G0023330.1 mouse_genomes_project 17 23922872 23963821 - MGP_129S1SvImJ_P0046065 Mapk8ip3 protein_coding protein_coding MGP_129S1SvImJ_T0046066.1 MGP_129S1SvImJ_G0023330.1 mouse_genomes_project 17 23922872 23963748 - MGP_129S1SvImJ_P0046066 Mapk8ip3 protein_coding protein_coding MGP_129S1SvImJ_T0046067.1 MGP_129S1SvImJ_G0023330.1 mouse_genomes_project 17 23922872 23963766 - MGP_129S1SvImJ_P0046067 Mapk8ip3 protein_coding protein_coding MGP_129S1SvImJ_T0046068.1 MGP_129S1SvImJ_G0023330.1 mouse_genomes_project 17 23922872 23963822 - MGP_129S1SvImJ_P0046068 Mapk8ip3 protein_coding protein_coding MGP_129S1SvImJ_T0046069.1 MGP_129S1SvImJ_G0023330.1 mouse_genomes_project 17 23922873 23963783 - MGP_129S1SvImJ_P0046069 Mapk8ip3 protein_coding protein_coding MGP_129S1SvImJ_T0046070.1 MGP_129S1SvImJ_G0023330.1 mouse_genomes_project 17 23923947 23925057 - Mapk8ip3 protein_coding retained_intron MGP_129S1SvImJ_T0046071.1 MGP_129S1SvImJ_G0023330.1 mouse_genomes_project 17 23924138 23963814 - MGP_129S1SvImJ_P0046071 Mapk8ip3 protein_coding protein_coding MGP_129S1SvImJ_T0046072.1 MGP_129S1SvImJ_G0023330.1 mouse_genomes_project 17 23924287 23963822 - MGP_129S1SvImJ_P0046072 Mapk8ip3 protein_coding protein_coding MGP_129S1SvImJ_T0046073.1 MGP_129S1SvImJ_G0023330.1 mouse_genomes_project 17 23925003 23926426 - Mapk8ip3 protein_coding retained_intron MGP_129S1SvImJ_T0046074.1 MGP_129S1SvImJ_G0023330.1 mouse_genomes_project 17 23925883 23927058 - Mapk8ip3 protein_coding retained_intron MGP_129S1SvImJ_T0046075.1 MGP_129S1SvImJ_G0023330.1 mouse_genomes_project 17 23927157 23928422 - Mapk8ip3 protein_coding retained_intron MGP_129S1SvImJ_T0046076.1 MGP_129S1SvImJ_G0023330.1 mouse_genomes_project 17 23928030 23928705 - Mapk8ip3 protein_coding retained_intron MGP_129S1SvImJ_T0046077.1 MGP_129S1SvImJ_G0023330.1 mouse_genomes_project 17 23931237 23932496 - Mapk8ip3 protein_coding retained_intron MGP_129S1SvImJ_T0046078.1 MGP_129S1SvImJ_G0023330.1 mouse_genomes_project 17 23931888 23933507 - Mapk8ip3 protein_coding retained_intron MGP_129S1SvImJ_T0046079.1 MGP_129S1SvImJ_G0023330.1 mouse_genomes_project 17 23933543 23943701 - Mapk8ip3 protein_coding processed_transcript MGP_129S1SvImJ_T0046080.1 MGP_129S1SvImJ_G0023330.1 mouse_genomes_project 17 23933633 23950982 - MGP_129S1SvImJ_P0046080 Mapk8ip3 protein_coding protein_coding MGP_129S1SvImJ_T0046081.1 MGP_129S1SvImJ_G0023330.1 mouse_genomes_project 17 23942487 23951325 - Mapk8ip3 protein_coding retained_intron MGP_129S1SvImJ_T0046082.1 MGP_129S1SvImJ_G0023330.1 mouse_genomes_project 17 23954212 23963799 - Mapk8ip3 protein_coding retained_intron MGP_129S1SvImJ_T0045509.1 MGP_129S1SvImJ_G0023136.1 mouse_genomes_project 17 6004339 6419998 + MGP_129S1SvImJ_P0045509 Pde10a protein_coding protein_coding MGP_129S1SvImJ_T0045510.1 MGP_129S1SvImJ_G0023136.1 mouse_genomes_project 17 6005679 6482030 + MGP_129S1SvImJ_P0045510 Pde10a protein_coding protein_coding MGP_129S1SvImJ_T0045513.1 MGP_129S1SvImJ_G0023136.1 mouse_genomes_project 17 6292357 6393773 + Pde10a protein_coding retained_intron MGP_129S1SvImJ_T0045514.1 MGP_129S1SvImJ_G0023136.1 mouse_genomes_project 17 6292443 6486175 + MGP_129S1SvImJ_P0045514 Pde10a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045515.1 MGP_129S1SvImJ_G0023136.1 mouse_genomes_project 17 6292743 6481190 + MGP_129S1SvImJ_P0045515 Pde10a protein_coding protein_coding MGP_129S1SvImJ_T0045516.1 MGP_129S1SvImJ_G0023136.1 mouse_genomes_project 17 6345214 6481934 + MGP_129S1SvImJ_P0045516 Pde10a protein_coding protein_coding MGP_129S1SvImJ_T0045517.1 MGP_129S1SvImJ_G0023136.1 mouse_genomes_project 17 6387886 6427110 + Pde10a protein_coding processed_transcript MGP_129S1SvImJ_T0045518.1 MGP_129S1SvImJ_G0023136.1 mouse_genomes_project 17 6420738 6483822 + MGP_129S1SvImJ_P0045518 Pde10a protein_coding protein_coding MGP_129S1SvImJ_T0045627.1 MGP_129S1SvImJ_G0023171.1 mouse_genomes_project 17 12862029 12893817 + MGP_129S1SvImJ_P0045627 Ermard protein_coding protein_coding MGP_129S1SvImJ_T0045628.1 MGP_129S1SvImJ_G0023171.1 mouse_genomes_project 17 12886180 12893351 + MGP_129S1SvImJ_P0045628 Ermard protein_coding protein_coding MGP_129S1SvImJ_T0048768.1 MGP_129S1SvImJ_G0024103.1 mouse_genomes_project 17 90826405 90840561 - Calm2 protein_coding retained_intron MGP_129S1SvImJ_T0048769.1 MGP_129S1SvImJ_G0024103.1 mouse_genomes_project 17 90826713 90840508 - MGP_129S1SvImJ_P0048769 Calm2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048770.1 MGP_129S1SvImJ_G0024103.1 mouse_genomes_project 17 90827576 90840562 - Calm2 protein_coding retained_intron MGP_129S1SvImJ_T0046769.1 MGP_129S1SvImJ_G0023493.1 mouse_genomes_project 17 31436178 31452219 - MGP_129S1SvImJ_P0046769 U2af1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0046770.1 MGP_129S1SvImJ_G0023493.1 mouse_genomes_project 17 31436183 31452235 - MGP_129S1SvImJ_P0046770 U2af1 protein_coding protein_coding MGP_129S1SvImJ_T0046771.1 MGP_129S1SvImJ_G0023493.1 mouse_genomes_project 17 31436183 31452235 - MGP_129S1SvImJ_P0046771 U2af1 protein_coding protein_coding MGP_129S1SvImJ_T0046509.1 MGP_129S1SvImJ_G0023436.1 mouse_genomes_project 17 27605541 27687098 + MGP_129S1SvImJ_P0046509 Ppard protein_coding protein_coding MGP_129S1SvImJ_T0046510.1 MGP_129S1SvImJ_G0023436.1 mouse_genomes_project 17 27605553 27680178 + Ppard protein_coding retained_intron MGP_129S1SvImJ_T0046511.1 MGP_129S1SvImJ_G0023436.1 mouse_genomes_project 17 27605569 27683998 + Ppard protein_coding processed_transcript MGP_129S1SvImJ_T0046512.1 MGP_129S1SvImJ_G0023436.1 mouse_genomes_project 17 27605594 27684076 + Ppard protein_coding retained_intron MGP_129S1SvImJ_T0046513.1 MGP_129S1SvImJ_G0023436.1 mouse_genomes_project 17 27650784 27652240 + Ppard protein_coding processed_transcript MGP_129S1SvImJ_T0046514.1 MGP_129S1SvImJ_G0023436.1 mouse_genomes_project 17 27651269 27682853 + MGP_129S1SvImJ_P0046514 Ppard protein_coding protein_coding MGP_129S1SvImJ_T0045791.1 MGP_129S1SvImJ_G0023256.1 mouse_genomes_project 17 22447042 22460617 - MGP_129S1SvImJ_P0045791 Zfp213 protein_coding protein_coding MGP_129S1SvImJ_T0047318.1 MGP_129S1SvImJ_G0023613.1 mouse_genomes_project 17 35212758 35215816 - MGP_129S1SvImJ_P0047318 Ly6g6d protein_coding protein_coding MGP_129S1SvImJ_T0047319.1 MGP_129S1SvImJ_G0023613.1 mouse_genomes_project 17 35212792 35219381 - Ly6g6d protein_coding processed_transcript MGP_129S1SvImJ_T0047320.1 MGP_129S1SvImJ_G0023613.1 mouse_genomes_project 17 35212860 35215780 - Ly6g6d protein_coding retained_intron MGP_129S1SvImJ_T0047321.1 MGP_129S1SvImJ_G0023613.1 mouse_genomes_project 17 35215230 35219381 - Ly6g6d protein_coding retained_intron MGP_129S1SvImJ_T0047322.1 MGP_129S1SvImJ_G0023613.1 mouse_genomes_project 17 35215528 35219372 - Ly6g6d protein_coding processed_transcript MGP_129S1SvImJ_T0102342.1 MGP_129S1SvImJ_G0040176.1 mouse_genomes_project 17 36865472 36867172 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0046447.1 MGP_129S1SvImJ_G0023423.1 mouse_genomes_project 17 26893896 26940121 - MGP_129S1SvImJ_P0046447 Nudt3 protein_coding protein_coding MGP_129S1SvImJ_T0046448.1 MGP_129S1SvImJ_G0023423.1 mouse_genomes_project 17 26895089 26939620 - MGP_129S1SvImJ_P0046448 Nudt3 protein_coding protein_coding MGP_129S1SvImJ_T0046449.1 MGP_129S1SvImJ_G0023423.1 mouse_genomes_project 17 26895220 26897850 - Nudt3 protein_coding retained_intron MGP_129S1SvImJ_T0046450.1 MGP_129S1SvImJ_G0023423.1 mouse_genomes_project 17 26895303 26939919 - MGP_129S1SvImJ_P0046450 Nudt3 protein_coding protein_coding MGP_129S1SvImJ_T0046451.1 MGP_129S1SvImJ_G0023423.1 mouse_genomes_project 17 26895348 26939049 - Nudt3 protein_coding processed_transcript MGP_129S1SvImJ_T0046452.1 MGP_129S1SvImJ_G0023423.1 mouse_genomes_project 17 26895467 26928373 - Nudt3 protein_coding processed_transcript MGP_129S1SvImJ_T0046453.1 MGP_129S1SvImJ_G0023423.1 mouse_genomes_project 17 26896490 26939919 - MGP_129S1SvImJ_P0046453 Nudt3 protein_coding protein_coding MGP_129S1SvImJ_T0046454.1 MGP_129S1SvImJ_G0023423.1 mouse_genomes_project 17 26896563 26939500 - MGP_129S1SvImJ_P0046454 Nudt3 protein_coding protein_coding MGP_129S1SvImJ_T0046455.1 MGP_129S1SvImJ_G0023423.1 mouse_genomes_project 17 26913219 26939919 - Nudt3 protein_coding retained_intron MGP_129S1SvImJ_T0045402.1 MGP_129S1SvImJ_G0023102.1 mouse_genomes_project 17 2080170 2191159 + Arid1b protein_coding processed_transcript MGP_129S1SvImJ_T0045403.1 MGP_129S1SvImJ_G0023102.1 mouse_genomes_project 17 2081957 2444762 + MGP_129S1SvImJ_P0045403 Arid1b protein_coding protein_coding MGP_129S1SvImJ_T0045404.1 MGP_129S1SvImJ_G0023102.1 mouse_genomes_project 17 2082063 2449188 + MGP_129S1SvImJ_P0045404 Arid1b protein_coding protein_coding MGP_129S1SvImJ_T0045405.1 MGP_129S1SvImJ_G0023102.1 mouse_genomes_project 17 2083410 2449188 + MGP_129S1SvImJ_P0045405 Arid1b protein_coding protein_coding MGP_129S1SvImJ_T0045406.1 MGP_129S1SvImJ_G0023102.1 mouse_genomes_project 17 2083418 2191612 + Arid1b protein_coding retained_intron MGP_129S1SvImJ_T0045407.1 MGP_129S1SvImJ_G0023102.1 mouse_genomes_project 17 2131006 2223356 + Arid1b protein_coding retained_intron MGP_129S1SvImJ_T0045409.1 MGP_129S1SvImJ_G0023102.1 mouse_genomes_project 17 2207595 2445190 + MGP_129S1SvImJ_P0045409 Arid1b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0046274.1 MGP_129S1SvImJ_G0023379.1 mouse_genomes_project 17 24981725 24983422 + MGP_129S1SvImJ_P0046274 Mettl26 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046275.1 MGP_129S1SvImJ_G0023379.1 mouse_genomes_project 17 24981761 24983431 + MGP_129S1SvImJ_P0046275 Mettl26 protein_coding protein_coding MGP_129S1SvImJ_T0046276.1 MGP_129S1SvImJ_G0023379.1 mouse_genomes_project 17 24981762 24983431 + MGP_129S1SvImJ_P0046276 Mettl26 protein_coding protein_coding MGP_129S1SvImJ_T0046277.1 MGP_129S1SvImJ_G0023379.1 mouse_genomes_project 17 24981791 24993767 + MGP_129S1SvImJ_P0046277 Mettl26 protein_coding protein_coding MGP_129S1SvImJ_T0046278.1 MGP_129S1SvImJ_G0023379.1 mouse_genomes_project 17 24981791 24983259 + MGP_129S1SvImJ_P0046278 Mettl26 protein_coding protein_coding MGP_129S1SvImJ_T0045408.1 MGP_129S1SvImJ_G0023103.1 mouse_genomes_project 17 2205454 2207297 - MGP_129S1SvImJ_P0045408 protein_coding protein_coding MGP_129S1SvImJ_T0045729.1 MGP_129S1SvImJ_G0023222.1 mouse_genomes_project 17 19906755 19907778 + MGP_129S1SvImJ_P0045729 protein_coding protein_coding MGP_129S1SvImJ_T0102348.1 MGP_129S1SvImJ_G0040182.1 mouse_genomes_project 17 37062027 37062456 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0013309.1 MGP_129S1SvImJ_G0011398.1 mouse_genomes_project 17 81516329 81520757 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102358.1 MGP_129S1SvImJ_G0040192.1 mouse_genomes_project 17 37774169 37774539 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0013294.1 MGP_129S1SvImJ_G0011383.1 mouse_genomes_project 17 57639331 57639593 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100827.1 MGP_129S1SvImJ_G0038894.1 mouse_genomes_project 17 35394145 35394222 + Gm22589 snoRNA snoRNA MGP_129S1SvImJ_T0006913.1 MGP_129S1SvImJ_G0005697.1 mouse_genomes_project 17 20274637 20283231 - 9330136K24Rik lincRNA lincRNA MGP_129S1SvImJ_T0099554.1 MGP_129S1SvImJ_G0037621.1 mouse_genomes_project 17 32682745 32682909 - Gm23294 snRNA snRNA MGP_129S1SvImJ_T0046798.1 MGP_129S1SvImJ_G0023501.1 mouse_genomes_project 17 32145732 32163223 - MGP_129S1SvImJ_P0046798 Akap8 protein_coding protein_coding MGP_129S1SvImJ_T0045448.1 MGP_129S1SvImJ_G0023113.1 mouse_genomes_project 17 3620449 3626852 + MGP_129S1SvImJ_P0045448 protein_coding protein_coding MGP_129S1SvImJ_T0048214.1 MGP_129S1SvImJ_G0023896.1 mouse_genomes_project 17 57214974 57245672 - MGP_129S1SvImJ_P0048214 Vmn2r118 protein_coding protein_coding MGP_129S1SvImJ_T0046055.1 MGP_129S1SvImJ_G0023331.1 mouse_genomes_project 17 23920446 23921619 + MGP_129S1SvImJ_P0046055 Mrps34 protein_coding protein_coding MGP_129S1SvImJ_T0046056.1 MGP_129S1SvImJ_G0023331.1 mouse_genomes_project 17 23920453 23922842 + MGP_129S1SvImJ_P0046056 Mrps34 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046057.1 MGP_129S1SvImJ_G0023331.1 mouse_genomes_project 17 23920465 23921446 + Mrps34 protein_coding retained_intron MGP_129S1SvImJ_T0046826.1 MGP_129S1SvImJ_G0023506.1 mouse_genomes_project 17 32308702 32334148 + MGP_129S1SvImJ_P0046826 Cyp4f39 protein_coding protein_coding MGP_129S1SvImJ_T0046873.1 MGP_129S1SvImJ_G0023526.1 mouse_genomes_project 17 33248705 33277858 - MGP_129S1SvImJ_P0046873 Zfp81 protein_coding protein_coding MGP_129S1SvImJ_T0045736.1 MGP_129S1SvImJ_G0023228.1 mouse_genomes_project 17 20162242 20174341 + MGP_129S1SvImJ_P0045736 Zfp54 protein_coding protein_coding MGP_129S1SvImJ_T0045737.1 MGP_129S1SvImJ_G0023228.1 mouse_genomes_project 17 20162248 20173855 + MGP_129S1SvImJ_P0045737 Zfp54 protein_coding protein_coding MGP_129S1SvImJ_T0045738.1 MGP_129S1SvImJ_G0023228.1 mouse_genomes_project 17 20162273 20172646 + MGP_129S1SvImJ_P0045738 Zfp54 protein_coding protein_coding MGP_129S1SvImJ_T0100832.1 MGP_129S1SvImJ_G0038899.1 mouse_genomes_project 17 61025317 61025438 - Gm23769 snoRNA snoRNA MGP_129S1SvImJ_T0045670.1 MGP_129S1SvImJ_G0023183.1 mouse_genomes_project 17 15689073 15734650 + MGP_129S1SvImJ_P0045670 Vmn2r90 protein_coding protein_coding MGP_129S1SvImJ_T0047792.1 MGP_129S1SvImJ_G0023782.1 mouse_genomes_project 17 45029139 45038615 - MGP_129S1SvImJ_P0047792 Enpp4 protein_coding protein_coding MGP_129S1SvImJ_T0047793.1 MGP_129S1SvImJ_G0023782.1 mouse_genomes_project 17 45029147 45038570 - MGP_129S1SvImJ_P0047793 Enpp4 protein_coding protein_coding MGP_129S1SvImJ_T0047323.1 MGP_129S1SvImJ_G0023614.1 mouse_genomes_project 17 35218217 35219610 + MGP_129S1SvImJ_P0047323 Ly6g6e protein_coding protein_coding MGP_129S1SvImJ_T0047324.1 MGP_129S1SvImJ_G0023614.1 mouse_genomes_project 17 35218246 35219866 + MGP_129S1SvImJ_P0047324 Ly6g6e protein_coding protein_coding MGP_129S1SvImJ_T0047325.1 MGP_129S1SvImJ_G0023614.1 mouse_genomes_project 17 35218252 35220120 + MGP_129S1SvImJ_P0047325 Ly6g6e protein_coding protein_coding MGP_129S1SvImJ_T0047326.1 MGP_129S1SvImJ_G0023614.1 mouse_genomes_project 17 35218470 35219601 + MGP_129S1SvImJ_P0047326 Ly6g6e protein_coding protein_coding MGP_129S1SvImJ_T0102290.1 MGP_129S1SvImJ_G0040124.1 mouse_genomes_project 17 18434016 18469918 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099577.1 MGP_129S1SvImJ_G0037644.1 mouse_genomes_project 17 82996871 82996977 + Gm23125 snRNA snRNA MGP_129S1SvImJ_T0045432.1 MGP_129S1SvImJ_G0023109.1 mouse_genomes_project 17 3201945 3240920 - MGP_129S1SvImJ_P0045432 Serac1 protein_coding protein_coding MGP_129S1SvImJ_T0045433.1 MGP_129S1SvImJ_G0023109.1 mouse_genomes_project 17 3203653 3209805 - Serac1 protein_coding processed_transcript MGP_129S1SvImJ_T0045434.1 MGP_129S1SvImJ_G0023109.1 mouse_genomes_project 17 3203815 3240906 - MGP_129S1SvImJ_P0045434 Serac1 protein_coding protein_coding MGP_129S1SvImJ_T0045435.1 MGP_129S1SvImJ_G0023109.1 mouse_genomes_project 17 3209776 3211138 - Serac1 protein_coding retained_intron MGP_129S1SvImJ_T0045436.1 MGP_129S1SvImJ_G0023109.1 mouse_genomes_project 17 3226127 3240912 - Serac1 protein_coding processed_transcript MGP_129S1SvImJ_T0047740.1 MGP_129S1SvImJ_G0023752.1 mouse_genomes_project 17 41009970 41030242 - MGP_129S1SvImJ_P0047740 Crisp3 protein_coding protein_coding MGP_129S1SvImJ_T0048625.1 MGP_129S1SvImJ_G0024044.1 mouse_genomes_project 17 81721402 81745626 - MGP_129S1SvImJ_P0048625 Sult6b1 protein_coding protein_coding MGP_129S1SvImJ_T0048626.1 MGP_129S1SvImJ_G0024044.1 mouse_genomes_project 17 81722353 81733815 - Sult6b1 protein_coding processed_transcript MGP_129S1SvImJ_T0048627.1 MGP_129S1SvImJ_G0024044.1 mouse_genomes_project 17 81722522 81745533 - MGP_129S1SvImJ_P0048627 Sult6b1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048628.1 MGP_129S1SvImJ_G0024044.1 mouse_genomes_project 17 81722522 81745533 - MGP_129S1SvImJ_P0048628 Sult6b1 protein_coding protein_coding MGP_129S1SvImJ_T0001014.1 MGP_129S1SvImJ_G0000943.1 mouse_genomes_project 17 53276375 53279550 - TEC TEC MGP_129S1SvImJ_T0013248.1 MGP_129S1SvImJ_G0011337.1 mouse_genomes_project 17 27112760 27113581 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102311.1 MGP_129S1SvImJ_G0040145.1 mouse_genomes_project 17 32844216 32851132 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0102368.1 MGP_129S1SvImJ_G0040202.1 mouse_genomes_project 17 55462410 55462971 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0046394.1 MGP_129S1SvImJ_G0023406.1 mouse_genomes_project 17 25980103 25984958 + Bnip1 protein_coding retained_intron MGP_129S1SvImJ_T0046395.1 MGP_129S1SvImJ_G0023406.1 mouse_genomes_project 17 25980112 25984959 + Bnip1 protein_coding retained_intron MGP_129S1SvImJ_T0046396.1 MGP_129S1SvImJ_G0023406.1 mouse_genomes_project 17 25980114 25992330 + MGP_129S1SvImJ_P0046396 Bnip1 protein_coding protein_coding MGP_129S1SvImJ_T0046397.1 MGP_129S1SvImJ_G0023406.1 mouse_genomes_project 17 25980114 25992678 + MGP_129S1SvImJ_P0046397 Bnip1 protein_coding protein_coding MGP_129S1SvImJ_T0046398.1 MGP_129S1SvImJ_G0023406.1 mouse_genomes_project 17 25980142 25992669 + MGP_129S1SvImJ_P0046398 Bnip1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046399.1 MGP_129S1SvImJ_G0023406.1 mouse_genomes_project 17 25980156 25992226 + MGP_129S1SvImJ_P0046399 Bnip1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046400.1 MGP_129S1SvImJ_G0023406.1 mouse_genomes_project 17 25986545 25990157 + Bnip1 protein_coding retained_intron MGP_129S1SvImJ_T0046401.1 MGP_129S1SvImJ_G0023406.1 mouse_genomes_project 17 25990923 25992714 + Bnip1 protein_coding retained_intron MGP_129S1SvImJ_T0047264.1 MGP_129S1SvImJ_G0023602.1 mouse_genomes_project 17 35099250 35101866 + MGP_129S1SvImJ_P0047264 Gm20481 protein_coding protein_coding MGP_129S1SvImJ_T0102351.1 MGP_129S1SvImJ_G0040185.1 mouse_genomes_project 17 37080096 37123150 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0045789.1 MGP_129S1SvImJ_G0023254.1 mouse_genomes_project 17 22291339 22311967 + MGP_129S1SvImJ_P0045789 protein_coding protein_coding MGP_129S1SvImJ_T0047639.1 MGP_129S1SvImJ_G0023691.1 mouse_genomes_project 17 37338608 37342141 - MGP_129S1SvImJ_P0047639 2410137M14Rik protein_coding protein_coding MGP_129S1SvImJ_T0047640.1 MGP_129S1SvImJ_G0023691.1 mouse_genomes_project 17 37338745 37342121 - MGP_129S1SvImJ_P0047640 2410137M14Rik protein_coding protein_coding MGP_129S1SvImJ_T0003764.1 MGP_129S1SvImJ_G0003390.1 mouse_genomes_project 17 32693060 32704505 + Gm26693 antisense antisense MGP_129S1SvImJ_T0099579.1 MGP_129S1SvImJ_G0037646.1 mouse_genomes_project 17 87550419 87550526 + Gm24722 snRNA snRNA MGP_129S1SvImJ_T0006965.1 MGP_129S1SvImJ_G0005739.1 mouse_genomes_project 17 49175988 49178058 + lincRNA lincRNA MGP_129S1SvImJ_T0046311.1 MGP_129S1SvImJ_G0023387.1 mouse_genomes_project 17 25106552 25141134 - MGP_129S1SvImJ_P0046311 Rab11fip3 protein_coding protein_coding MGP_129S1SvImJ_T0046312.1 MGP_129S1SvImJ_G0023387.1 mouse_genomes_project 17 25106552 25194302 - MGP_129S1SvImJ_P0046312 Rab11fip3 protein_coding protein_coding MGP_129S1SvImJ_T0046313.1 MGP_129S1SvImJ_G0023387.1 mouse_genomes_project 17 25106561 25194534 - MGP_129S1SvImJ_P0046313 Rab11fip3 protein_coding protein_coding MGP_129S1SvImJ_T0046314.1 MGP_129S1SvImJ_G0023387.1 mouse_genomes_project 17 25121856 25141092 - Rab11fip3 protein_coding retained_intron MGP_129S1SvImJ_T0046315.1 MGP_129S1SvImJ_G0023387.1 mouse_genomes_project 17 25133125 25137741 - MGP_129S1SvImJ_P0046315 Rab11fip3 protein_coding protein_coding MGP_129S1SvImJ_T0046316.1 MGP_129S1SvImJ_G0023387.1 mouse_genomes_project 17 25156990 25194360 - Rab11fip3 protein_coding processed_transcript MGP_129S1SvImJ_T0102288.1 MGP_129S1SvImJ_G0040122.1 mouse_genomes_project 17 17867706 17868904 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0045741.1 MGP_129S1SvImJ_G0023231.1 mouse_genomes_project 17 20294225 20301255 + MGP_129S1SvImJ_P0045741 Zfp52 protein_coding protein_coding MGP_129S1SvImJ_T0100825.1 MGP_129S1SvImJ_G0038892.1 mouse_genomes_project 17 35075410 35075473 - Gm25744 snoRNA snoRNA MGP_129S1SvImJ_T0003779.1 MGP_129S1SvImJ_G0003402.1 mouse_genomes_project 17 36102324 36117545 + Gm16279 antisense antisense MGP_129S1SvImJ_T0045699.1 MGP_129S1SvImJ_G0023198.1 mouse_genomes_project 17 17036279 17665087 + MGP_129S1SvImJ_P0045699 protein_coding protein_coding MGP_129S1SvImJ_T0098334.1 MGP_129S1SvImJ_G0036419.1 mouse_genomes_project 17 80986884 80987242 - pseudogene pseudogene MGP_129S1SvImJ_T0013261.1 MGP_129S1SvImJ_G0011350.1 mouse_genomes_project 17 36606378 36606648 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0047103.1 MGP_129S1SvImJ_G0023573.1 mouse_genomes_project 17 34413684 34434759 + BC051142 protein_coding processed_transcript MGP_129S1SvImJ_T0047104.1 MGP_129S1SvImJ_G0023573.1 mouse_genomes_project 17 34413684 34477490 + MGP_129S1SvImJ_P0047104 BC051142 protein_coding protein_coding MGP_129S1SvImJ_T0047105.1 MGP_129S1SvImJ_G0023573.1 mouse_genomes_project 17 34413684 34462248 + MGP_129S1SvImJ_P0047105 BC051142 protein_coding protein_coding MGP_129S1SvImJ_T0047106.1 MGP_129S1SvImJ_G0023573.1 mouse_genomes_project 17 34413685 34437869 + BC051142 protein_coding retained_intron MGP_129S1SvImJ_T0047107.1 MGP_129S1SvImJ_G0023573.1 mouse_genomes_project 17 34413704 34477490 + MGP_129S1SvImJ_P0047107 BC051142 protein_coding protein_coding MGP_129S1SvImJ_T0047108.1 MGP_129S1SvImJ_G0023573.1 mouse_genomes_project 17 34434143 34456607 + MGP_129S1SvImJ_P0047108 BC051142 protein_coding protein_coding MGP_129S1SvImJ_T0047109.1 MGP_129S1SvImJ_G0023573.1 mouse_genomes_project 17 34434210 34477491 + MGP_129S1SvImJ_P0047109 BC051142 protein_coding protein_coding MGP_129S1SvImJ_T0047110.1 MGP_129S1SvImJ_G0023573.1 mouse_genomes_project 17 34434235 34477491 + MGP_129S1SvImJ_P0047110 BC051142 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0047111.1 MGP_129S1SvImJ_G0023573.1 mouse_genomes_project 17 34434240 34477491 + MGP_129S1SvImJ_P0047111 BC051142 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0047112.1 MGP_129S1SvImJ_G0023573.1 mouse_genomes_project 17 34434754 34452827 + BC051142 protein_coding processed_transcript MGP_129S1SvImJ_T0047113.1 MGP_129S1SvImJ_G0023573.1 mouse_genomes_project 17 34434776 34438632 + MGP_129S1SvImJ_P0047113 BC051142 protein_coding protein_coding MGP_129S1SvImJ_T0102296.1 MGP_129S1SvImJ_G0040130.1 mouse_genomes_project 17 19642581 19643520 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0011454.1 MGP_129S1SvImJ_G0009570.1 mouse_genomes_project 17 71954329 71954568 - Gm22967 misc_RNA misc_RNA MGP_129S1SvImJ_T0046994.1 MGP_129S1SvImJ_G0023547.1 mouse_genomes_project 17 33899314 33900883 - MGP_129S1SvImJ_P0046994 B3galt4 protein_coding protein_coding MGP_129S1SvImJ_T0045764.1 MGP_129S1SvImJ_G0023244.1 mouse_genomes_project 17 20814171 20815228 - MGP_129S1SvImJ_P0045764 protein_coding protein_coding MGP_129S1SvImJ_T0047390.1 MGP_129S1SvImJ_G0023630.1 mouse_genomes_project 17 35371642 35387260 - MGP_129S1SvImJ_P0047390 Nfkbil1 protein_coding protein_coding MGP_129S1SvImJ_T0047392.1 MGP_129S1SvImJ_G0023630.1 mouse_genomes_project 17 35372303 35373125 - Nfkbil1 protein_coding processed_transcript MGP_129S1SvImJ_T0047853.1 MGP_129S1SvImJ_G0023795.1 mouse_genomes_project 17 46621572 46622708 - MGP_129S1SvImJ_P0047853 Gm7325 protein_coding protein_coding MGP_129S1SvImJ_T0047854.1 MGP_129S1SvImJ_G0023795.1 mouse_genomes_project 17 46621572 46622673 - MGP_129S1SvImJ_P0047854 Gm7325 protein_coding protein_coding MGP_129S1SvImJ_T0047855.1 MGP_129S1SvImJ_G0023795.1 mouse_genomes_project 17 46621572 46622521 - MGP_129S1SvImJ_P0047855 Gm7325 protein_coding protein_coding MGP_129S1SvImJ_T0048689.1 MGP_129S1SvImJ_G0024074.1 mouse_genomes_project 17 86670993 86721168 - MGP_129S1SvImJ_P0048689 Kcng3 protein_coding protein_coding MGP_129S1SvImJ_T0046379.1 MGP_129S1SvImJ_G0023403.1 mouse_genomes_project 17 25747478 25845753 + MGP_129S1SvImJ_P0046379 Ergic1 protein_coding protein_coding MGP_129S1SvImJ_T0046380.1 MGP_129S1SvImJ_G0023403.1 mouse_genomes_project 17 25747507 25754972 + Ergic1 protein_coding processed_transcript MGP_129S1SvImJ_T0046381.1 MGP_129S1SvImJ_G0023403.1 mouse_genomes_project 17 25747534 25843996 + Ergic1 protein_coding processed_transcript MGP_129S1SvImJ_T0046382.1 MGP_129S1SvImJ_G0023403.1 mouse_genomes_project 17 25801772 25823260 + MGP_129S1SvImJ_P0046382 Ergic1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046383.1 MGP_129S1SvImJ_G0023403.1 mouse_genomes_project 17 25810273 25843996 + Ergic1 protein_coding processed_transcript MGP_129S1SvImJ_T0046384.1 MGP_129S1SvImJ_G0023403.1 mouse_genomes_project 17 25812995 25832703 + Ergic1 protein_coding retained_intron MGP_129S1SvImJ_T0046385.1 MGP_129S1SvImJ_G0023403.1 mouse_genomes_project 17 25827567 25844174 + MGP_129S1SvImJ_P0046385 Ergic1 protein_coding protein_coding MGP_129S1SvImJ_T0011463.1 MGP_129S1SvImJ_G0009579.1 mouse_genomes_project 17 88872530 88872723 + Gm27427 misc_RNA misc_RNA MGP_129S1SvImJ_T0047712.1 MGP_129S1SvImJ_G0023730.1 mouse_genomes_project 17 38322590 38323708 + MGP_129S1SvImJ_P0047712 Olfr125 protein_coding protein_coding MGP_129S1SvImJ_T0046896.1 MGP_129S1SvImJ_G0023531.1 mouse_genomes_project 17 33544081 33546771 + MGP_129S1SvImJ_P0046896 Zfp414 protein_coding protein_coding MGP_129S1SvImJ_T0046897.1 MGP_129S1SvImJ_G0023531.1 mouse_genomes_project 17 33544081 33546708 + MGP_129S1SvImJ_P0046897 Zfp414 protein_coding protein_coding MGP_129S1SvImJ_T0046898.1 MGP_129S1SvImJ_G0023531.1 mouse_genomes_project 17 33544092 33545949 + Zfp414 protein_coding retained_intron MGP_129S1SvImJ_T0046899.1 MGP_129S1SvImJ_G0023531.1 mouse_genomes_project 17 33544112 33546456 + MGP_129S1SvImJ_P0046899 Zfp414 protein_coding protein_coding MGP_129S1SvImJ_T0046900.1 MGP_129S1SvImJ_G0023531.1 mouse_genomes_project 17 33544205 33546712 + MGP_129S1SvImJ_P0046900 Zfp414 protein_coding protein_coding MGP_129S1SvImJ_T0046901.1 MGP_129S1SvImJ_G0023531.1 mouse_genomes_project 17 33545192 33545763 + Zfp414 protein_coding retained_intron MGP_129S1SvImJ_T0046902.1 MGP_129S1SvImJ_G0023531.1 mouse_genomes_project 17 33546080 33546682 + Zfp414 protein_coding retained_intron MGP_129S1SvImJ_T0017573.1 MGP_129S1SvImJ_G0015337.1 mouse_genomes_project 17 11433686 11442838 - Gm16046 processed_transcript processed_transcript MGP_129S1SvImJ_T0017574.1 MGP_129S1SvImJ_G0015337.1 mouse_genomes_project 17 11437157 11442828 - Gm16046 processed_transcript processed_transcript MGP_129S1SvImJ_T0017575.1 MGP_129S1SvImJ_G0015337.1 mouse_genomes_project 17 11439363 11442857 - Gm16046 processed_transcript processed_transcript MGP_129S1SvImJ_T0045458.1 MGP_129S1SvImJ_G0023118.1 mouse_genomes_project 17 4423915 4566534 + MGP_129S1SvImJ_P0045458 Rps6ka2 protein_coding protein_coding MGP_129S1SvImJ_T0047177.1 MGP_129S1SvImJ_G0023585.1 mouse_genomes_project 17 34726620 34728181 + MGP_129S1SvImJ_P0047177 Fkbpl protein_coding protein_coding MGP_129S1SvImJ_T0047178.1 MGP_129S1SvImJ_G0023585.1 mouse_genomes_project 17 34726697 34727179 + MGP_129S1SvImJ_P0047178 Fkbpl protein_coding protein_coding MGP_129S1SvImJ_T0006971.1 MGP_129S1SvImJ_G0005741.1 mouse_genomes_project 17 51641688 51648825 + AY702103 lincRNA lincRNA MGP_129S1SvImJ_T0006972.1 MGP_129S1SvImJ_G0005741.1 mouse_genomes_project 17 51641884 51644000 + AY702103 lincRNA lincRNA MGP_129S1SvImJ_T0047722.1 MGP_129S1SvImJ_G0023737.1 mouse_genomes_project 17 38709644 38710571 + MGP_129S1SvImJ_P0047722 Olfr134 protein_coding protein_coding MGP_129S1SvImJ_T0047513.1 MGP_129S1SvImJ_G0023659.1 mouse_genomes_project 17 36098318 36102809 - MGP_129S1SvImJ_P0047513 2310061I04Rik protein_coding protein_coding MGP_129S1SvImJ_T0047514.1 MGP_129S1SvImJ_G0023659.1 mouse_genomes_project 17 36098318 36102499 - MGP_129S1SvImJ_P0047514 2310061I04Rik protein_coding protein_coding MGP_129S1SvImJ_T0047515.1 MGP_129S1SvImJ_G0023659.1 mouse_genomes_project 17 36098324 36100695 - MGP_129S1SvImJ_P0047515 2310061I04Rik protein_coding protein_coding MGP_129S1SvImJ_T0047516.1 MGP_129S1SvImJ_G0023659.1 mouse_genomes_project 17 36098328 36102490 - MGP_129S1SvImJ_P0047516 2310061I04Rik protein_coding protein_coding MGP_129S1SvImJ_T0047517.1 MGP_129S1SvImJ_G0023659.1 mouse_genomes_project 17 36098472 36101302 - MGP_129S1SvImJ_P0047517 2310061I04Rik protein_coding protein_coding MGP_129S1SvImJ_T0047518.1 MGP_129S1SvImJ_G0023659.1 mouse_genomes_project 17 36100425 36102452 - MGP_129S1SvImJ_P0047518 2310061I04Rik protein_coding protein_coding MGP_129S1SvImJ_T0047519.1 MGP_129S1SvImJ_G0023659.1 mouse_genomes_project 17 36101152 36101987 - 2310061I04Rik protein_coding processed_transcript MGP_129S1SvImJ_T0047520.1 MGP_129S1SvImJ_G0023659.1 mouse_genomes_project 17 36101301 36102482 - MGP_129S1SvImJ_P0047520 2310061I04Rik protein_coding protein_coding MGP_129S1SvImJ_T0047521.1 MGP_129S1SvImJ_G0023659.1 mouse_genomes_project 17 36101654 36102691 - 2310061I04Rik protein_coding processed_transcript MGP_129S1SvImJ_T0098528.1 MGP_129S1SvImJ_G0036613.1 mouse_genomes_project 17 32687045 32687156 - Gm25555 rRNA rRNA MGP_129S1SvImJ_T0048718.1 MGP_129S1SvImJ_G0024084.1 mouse_genomes_project 17 88157435 88206908 + MGP_129S1SvImJ_P0048718 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048719.1 MGP_129S1SvImJ_G0024084.1 mouse_genomes_project 17 88204495 88222835 + MGP_129S1SvImJ_P0048719 protein_coding protein_coding MGP_129S1SvImJ_T0102327.1 MGP_129S1SvImJ_G0040161.1 mouse_genomes_project 17 35328264 35332399 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0048252.1 MGP_129S1SvImJ_G0023916.1 mouse_genomes_project 17 57815868 57828499 + MGP_129S1SvImJ_P0048252 Tnfaip8l1 protein_coding protein_coding MGP_129S1SvImJ_T0048177.1 MGP_129S1SvImJ_G0023884.1 mouse_genomes_project 17 53216978 53314295 - MGP_129S1SvImJ_P0048177 Satb1 protein_coding protein_coding MGP_129S1SvImJ_T0048178.1 MGP_129S1SvImJ_G0023884.1 mouse_genomes_project 17 53216979 53308231 - MGP_129S1SvImJ_P0048178 Satb1 protein_coding protein_coding MGP_129S1SvImJ_T0048179.1 MGP_129S1SvImJ_G0023884.1 mouse_genomes_project 17 53219685 53314815 - MGP_129S1SvImJ_P0048179 Satb1 protein_coding protein_coding MGP_129S1SvImJ_T0048180.1 MGP_129S1SvImJ_G0023884.1 mouse_genomes_project 17 53220243 53291279 - MGP_129S1SvImJ_P0048180 Satb1 protein_coding protein_coding MGP_129S1SvImJ_T0048181.1 MGP_129S1SvImJ_G0023884.1 mouse_genomes_project 17 53220246 53308209 - MGP_129S1SvImJ_P0048181 Satb1 protein_coding protein_coding MGP_129S1SvImJ_T0048182.1 MGP_129S1SvImJ_G0023884.1 mouse_genomes_project 17 53220262 53295364 - MGP_129S1SvImJ_P0048182 Satb1 protein_coding protein_coding MGP_129S1SvImJ_T0048183.1 MGP_129S1SvImJ_G0023884.1 mouse_genomes_project 17 53220267 53293040 - MGP_129S1SvImJ_P0048183 Satb1 protein_coding protein_coding MGP_129S1SvImJ_T0048184.1 MGP_129S1SvImJ_G0023884.1 mouse_genomes_project 17 53220779 53223058 - Satb1 protein_coding retained_intron MGP_129S1SvImJ_T0048185.1 MGP_129S1SvImJ_G0023884.1 mouse_genomes_project 17 53282689 53289492 - Satb1 protein_coding processed_transcript MGP_129S1SvImJ_T0048186.1 MGP_129S1SvImJ_G0023884.1 mouse_genomes_project 17 53284725 53302736 - MGP_129S1SvImJ_P0048186 Satb1 protein_coding protein_coding MGP_129S1SvImJ_T0048187.1 MGP_129S1SvImJ_G0023884.1 mouse_genomes_project 17 53285722 53313642 - MGP_129S1SvImJ_P0048187 Satb1 protein_coding protein_coding MGP_129S1SvImJ_T0048188.1 MGP_129S1SvImJ_G0023884.1 mouse_genomes_project 17 53287439 53291279 - Satb1 protein_coding retained_intron MGP_129S1SvImJ_T0048189.1 MGP_129S1SvImJ_G0023884.1 mouse_genomes_project 17 53289548 53308231 - MGP_129S1SvImJ_P0048189 Satb1 protein_coding protein_coding MGP_129S1SvImJ_T0048190.1 MGP_129S1SvImJ_G0023884.1 mouse_genomes_project 17 53306284 53311140 - Satb1 protein_coding retained_intron MGP_129S1SvImJ_T0047940.1 MGP_129S1SvImJ_G0023813.1 mouse_genomes_project 17 47434016 47466077 + MGP_129S1SvImJ_P0047940 Zfp318 protein_coding protein_coding MGP_129S1SvImJ_T0047941.1 MGP_129S1SvImJ_G0023813.1 mouse_genomes_project 17 47434036 47472162 + MGP_129S1SvImJ_P0047941 Zfp318 protein_coding protein_coding MGP_129S1SvImJ_T0047942.1 MGP_129S1SvImJ_G0023813.1 mouse_genomes_project 17 47451312 47461960 + MGP_129S1SvImJ_P0047942 Zfp318 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047943.1 MGP_129S1SvImJ_G0023813.1 mouse_genomes_project 17 47457111 47460614 + Zfp318 protein_coding retained_intron MGP_129S1SvImJ_T0047944.1 MGP_129S1SvImJ_G0023813.1 mouse_genomes_project 17 47460881 47462563 + Zfp318 protein_coding retained_intron MGP_129S1SvImJ_T0046620.1 MGP_129S1SvImJ_G0023456.1 mouse_genomes_project 17 28531838 28541362 + protein_coding retained_intron MGP_129S1SvImJ_T0046621.1 MGP_129S1SvImJ_G0023456.1 mouse_genomes_project 17 28531838 28542485 + MGP_129S1SvImJ_P0046621 protein_coding protein_coding MGP_129S1SvImJ_T0046622.1 MGP_129S1SvImJ_G0023456.1 mouse_genomes_project 17 28535526 28539293 + protein_coding retained_intron MGP_129S1SvImJ_T0047984.1 MGP_129S1SvImJ_G0023827.1 mouse_genomes_project 17 47761338 47763943 + MGP_129S1SvImJ_P0047984 Mea1 protein_coding protein_coding MGP_129S1SvImJ_T0047292.1 MGP_129S1SvImJ_G0023607.1 mouse_genomes_project 17 35158692 35160258 - Sapcd1 protein_coding retained_intron MGP_129S1SvImJ_T0047293.1 MGP_129S1SvImJ_G0023607.1 mouse_genomes_project 17 35158692 35160513 - MGP_129S1SvImJ_P0047293 Sapcd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047294.1 MGP_129S1SvImJ_G0023607.1 mouse_genomes_project 17 35158710 35160615 - MGP_129S1SvImJ_P0047294 Sapcd1 protein_coding protein_coding MGP_129S1SvImJ_T0047295.1 MGP_129S1SvImJ_G0023607.1 mouse_genomes_project 17 35158998 35160615 - MGP_129S1SvImJ_P0047295 Sapcd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0006937.1 MGP_129S1SvImJ_G0005715.1 mouse_genomes_project 17 28997764 29031733 - Gm26885 lincRNA lincRNA MGP_129S1SvImJ_T0047754.1 MGP_129S1SvImJ_G0023762.1 mouse_genomes_project 17 41682378 41687448 - MGP_129S1SvImJ_P0047754 9130008F23Rik protein_coding protein_coding MGP_129S1SvImJ_T0047063.1 MGP_129S1SvImJ_G0023559.1 mouse_genomes_project 17 34125243 34131000 + protein_coding processed_transcript MGP_129S1SvImJ_T0047064.1 MGP_129S1SvImJ_G0023559.1 mouse_genomes_project 17 34128385 34137387 + MGP_129S1SvImJ_P0047064 protein_coding protein_coding MGP_129S1SvImJ_T0100824.1 MGP_129S1SvImJ_G0038891.1 mouse_genomes_project 17 35074349 35074415 - Snord52 snoRNA snoRNA MGP_129S1SvImJ_T0017595.1 MGP_129S1SvImJ_G0015350.1 mouse_genomes_project 17 34826625 34933656 - processed_transcript processed_transcript MGP_129S1SvImJ_T0017596.1 MGP_129S1SvImJ_G0015350.1 mouse_genomes_project 17 34826625 34933666 - processed_transcript processed_transcript MGP_129S1SvImJ_T0017597.1 MGP_129S1SvImJ_G0015350.1 mouse_genomes_project 17 34826625 34933666 - processed_transcript processed_transcript MGP_129S1SvImJ_T0017598.1 MGP_129S1SvImJ_G0015350.1 mouse_genomes_project 17 34826898 34828821 - processed_transcript retained_intron MGP_129S1SvImJ_T0017599.1 MGP_129S1SvImJ_G0015350.1 mouse_genomes_project 17 34827379 34828827 - processed_transcript processed_transcript MGP_129S1SvImJ_T0017600.1 MGP_129S1SvImJ_G0015350.1 mouse_genomes_project 17 34828547 34829589 - processed_transcript processed_transcript MGP_129S1SvImJ_T0017601.1 MGP_129S1SvImJ_G0015350.1 mouse_genomes_project 17 34828751 34829691 - processed_transcript retained_intron MGP_129S1SvImJ_T0017602.1 MGP_129S1SvImJ_G0015350.1 mouse_genomes_project 17 34830298 34844015 - processed_transcript processed_transcript MGP_129S1SvImJ_T0017603.1 MGP_129S1SvImJ_G0015350.1 mouse_genomes_project 17 34831240 34832540 - processed_transcript retained_intron MGP_129S1SvImJ_T0045437.1 MGP_129S1SvImJ_G0023110.1 mouse_genomes_project 17 3240964 3247716 + MGP_129S1SvImJ_P0045437 Gtf2h5 protein_coding protein_coding MGP_129S1SvImJ_T0045438.1 MGP_129S1SvImJ_G0023110.1 mouse_genomes_project 17 3241015 3243518 + Gtf2h5 protein_coding retained_intron MGP_129S1SvImJ_T0045439.1 MGP_129S1SvImJ_G0023110.1 mouse_genomes_project 17 3241108 3246331 + MGP_129S1SvImJ_P0045439 Gtf2h5 protein_coding protein_coding MGP_129S1SvImJ_T0011439.1 MGP_129S1SvImJ_G0009555.1 mouse_genomes_project 17 10435690 10435942 + Gm23833 misc_RNA misc_RNA MGP_129S1SvImJ_T0046096.1 MGP_129S1SvImJ_G0023338.1 mouse_genomes_project 17 24135545 24154856 - MGP_129S1SvImJ_P0046096 Telo2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0046097.1 MGP_129S1SvImJ_G0023338.1 mouse_genomes_project 17 24135547 24154844 - Telo2 protein_coding retained_intron MGP_129S1SvImJ_T0046098.1 MGP_129S1SvImJ_G0023338.1 mouse_genomes_project 17 24135547 24154904 - MGP_129S1SvImJ_P0046098 Telo2 protein_coding protein_coding MGP_129S1SvImJ_T0046099.1 MGP_129S1SvImJ_G0023338.1 mouse_genomes_project 17 24135554 24154842 - MGP_129S1SvImJ_P0046099 Telo2 protein_coding protein_coding MGP_129S1SvImJ_T0046100.1 MGP_129S1SvImJ_G0023338.1 mouse_genomes_project 17 24135594 24139629 - Telo2 protein_coding processed_transcript MGP_129S1SvImJ_T0046101.1 MGP_129S1SvImJ_G0023338.1 mouse_genomes_project 17 24135602 24145769 - Telo2 protein_coding processed_transcript MGP_129S1SvImJ_T0046102.1 MGP_129S1SvImJ_G0023338.1 mouse_genomes_project 17 24135801 24137413 - Telo2 protein_coding processed_transcript MGP_129S1SvImJ_T0046103.1 MGP_129S1SvImJ_G0023338.1 mouse_genomes_project 17 24136743 24147065 - Telo2 protein_coding retained_intron MGP_129S1SvImJ_T0046104.1 MGP_129S1SvImJ_G0023338.1 mouse_genomes_project 17 24149764 24154129 - Telo2 protein_coding processed_transcript MGP_129S1SvImJ_T0046105.1 MGP_129S1SvImJ_G0023338.1 mouse_genomes_project 17 24150061 24152588 - Telo2 protein_coding processed_transcript MGP_129S1SvImJ_T0046106.1 MGP_129S1SvImJ_G0023338.1 mouse_genomes_project 17 24152141 24154249 - Telo2 protein_coding processed_transcript MGP_129S1SvImJ_T0046107.1 MGP_129S1SvImJ_G0023338.1 mouse_genomes_project 17 24153076 24154891 - Telo2 protein_coding retained_intron MGP_129S1SvImJ_T0048533.1 MGP_129S1SvImJ_G0024010.1 mouse_genomes_project 17 74012970 74039620 + MGP_129S1SvImJ_P0048533 Spdya protein_coding protein_coding MGP_129S1SvImJ_T0048534.1 MGP_129S1SvImJ_G0024010.1 mouse_genomes_project 17 74012970 74052157 + MGP_129S1SvImJ_P0048534 Spdya protein_coding protein_coding MGP_129S1SvImJ_T0048535.1 MGP_129S1SvImJ_G0024010.1 mouse_genomes_project 17 74012981 74052157 + MGP_129S1SvImJ_P0048535 Spdya protein_coding protein_coding MGP_129S1SvImJ_T0048536.1 MGP_129S1SvImJ_G0024010.1 mouse_genomes_project 17 74017176 74051298 + MGP_129S1SvImJ_P0048536 Spdya protein_coding protein_coding MGP_129S1SvImJ_T0098336.1 MGP_129S1SvImJ_G0036421.1 mouse_genomes_project 17 94018514 94019127 + pseudogene pseudogene MGP_129S1SvImJ_T0048246.1 MGP_129S1SvImJ_G0023912.1 mouse_genomes_project 17 57744543 57754446 - MGP_129S1SvImJ_P0048246 Plin4 protein_coding protein_coding MGP_129S1SvImJ_T0100834.1 MGP_129S1SvImJ_G0038901.1 mouse_genomes_project 17 65250953 65251070 + Gm24730 snoRNA snoRNA MGP_129S1SvImJ_T0047136.1 MGP_129S1SvImJ_G0023579.1 mouse_genomes_project 17 34672489 34675560 + MGP_129S1SvImJ_P0047136 Ager protein_coding protein_coding MGP_129S1SvImJ_T0047137.1 MGP_129S1SvImJ_G0023579.1 mouse_genomes_project 17 34672489 34675564 + MGP_129S1SvImJ_P0047137 Ager protein_coding protein_coding MGP_129S1SvImJ_T0047138.1 MGP_129S1SvImJ_G0023579.1 mouse_genomes_project 17 34672502 34675535 + Ager protein_coding processed_transcript MGP_129S1SvImJ_T0047139.1 MGP_129S1SvImJ_G0023579.1 mouse_genomes_project 17 34672502 34675535 + Ager protein_coding retained_intron MGP_129S1SvImJ_T0047140.1 MGP_129S1SvImJ_G0023579.1 mouse_genomes_project 17 34672521 34675488 + Ager protein_coding retained_intron MGP_129S1SvImJ_T0047141.1 MGP_129S1SvImJ_G0023579.1 mouse_genomes_project 17 34672521 34675488 + Ager protein_coding retained_intron MGP_129S1SvImJ_T0047142.1 MGP_129S1SvImJ_G0023579.1 mouse_genomes_project 17 34672521 34675488 + Ager protein_coding retained_intron MGP_129S1SvImJ_T0047143.1 MGP_129S1SvImJ_G0023579.1 mouse_genomes_project 17 34672521 34675524 + Ager protein_coding retained_intron MGP_129S1SvImJ_T0047144.1 MGP_129S1SvImJ_G0023579.1 mouse_genomes_project 17 34672521 34675488 + Ager protein_coding retained_intron MGP_129S1SvImJ_T0047145.1 MGP_129S1SvImJ_G0023579.1 mouse_genomes_project 17 34672521 34675488 + Ager protein_coding retained_intron MGP_129S1SvImJ_T0047146.1 MGP_129S1SvImJ_G0023579.1 mouse_genomes_project 17 34672521 34675488 + Ager protein_coding retained_intron MGP_129S1SvImJ_T0047147.1 MGP_129S1SvImJ_G0023579.1 mouse_genomes_project 17 34672521 34675524 + MGP_129S1SvImJ_P0047147 Ager protein_coding protein_coding MGP_129S1SvImJ_T0047148.1 MGP_129S1SvImJ_G0023579.1 mouse_genomes_project 17 34672521 34675524 + MGP_129S1SvImJ_P0047148 Ager protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046202.1 MGP_129S1SvImJ_G0023362.1 mouse_genomes_project 17 24818949 24824544 + MGP_129S1SvImJ_P0046202 Rpusd1 protein_coding protein_coding MGP_129S1SvImJ_T0046661.1 MGP_129S1SvImJ_G0023466.1 mouse_genomes_project 17 29064917 29065427 - MGP_129S1SvImJ_P0046661 Gm17657 protein_coding protein_coding MGP_129S1SvImJ_T0013254.1 MGP_129S1SvImJ_G0011343.1 mouse_genomes_project 17 34639077 34639485 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048256.1 MGP_129S1SvImJ_G0023918.1 mouse_genomes_project 17 57840967 57873161 - MGP_129S1SvImJ_P0048256 Dpp9 protein_coding protein_coding MGP_129S1SvImJ_T0047393.1 MGP_129S1SvImJ_G0023632.1 mouse_genomes_project 17 35385127 35390235 + Atp6v1g2 protein_coding retained_intron MGP_129S1SvImJ_T0047394.1 MGP_129S1SvImJ_G0023632.1 mouse_genomes_project 17 35386555 35389273 + MGP_129S1SvImJ_P0047394 Atp6v1g2 protein_coding protein_coding MGP_129S1SvImJ_T0047395.1 MGP_129S1SvImJ_G0023632.1 mouse_genomes_project 17 35387345 35389372 + MGP_129S1SvImJ_P0047395 Atp6v1g2 protein_coding protein_coding MGP_129S1SvImJ_T0047396.1 MGP_129S1SvImJ_G0023632.1 mouse_genomes_project 17 35387359 35389541 + Atp6v1g2 protein_coding retained_intron MGP_129S1SvImJ_T0047397.1 MGP_129S1SvImJ_G0023632.1 mouse_genomes_project 17 35388029 35390235 + MGP_129S1SvImJ_P0047397 Atp6v1g2 protein_coding protein_coding MGP_129S1SvImJ_T0047398.1 MGP_129S1SvImJ_G0023632.1 mouse_genomes_project 17 35388123 35389435 + Atp6v1g2 protein_coding retained_intron MGP_129S1SvImJ_T0045858.1 MGP_129S1SvImJ_G0023277.1 mouse_genomes_project 17 22802620 22807649 + MGP_129S1SvImJ_P0045858 Prss21 protein_coding protein_coding MGP_129S1SvImJ_T0045847.1 MGP_129S1SvImJ_G0023273.1 mouse_genomes_project 17 22749902 22754188 - MGP_129S1SvImJ_P0045847 Tceb2 protein_coding protein_coding MGP_129S1SvImJ_T0048780.1 MGP_129S1SvImJ_G0024107.1 mouse_genomes_project 17 91426147 91443249 + MGP_129S1SvImJ_P0048780 Msh6 protein_coding protein_coding MGP_129S1SvImJ_T0047676.1 MGP_129S1SvImJ_G0023698.1 mouse_genomes_project 17 37525145 37526193 - MGP_129S1SvImJ_P0047676 Olfr93 protein_coding protein_coding MGP_129S1SvImJ_T0048736.1 MGP_129S1SvImJ_G0024093.1 mouse_genomes_project 17 90090030 90175353 + MGP_129S1SvImJ_P0048736 Epas1 protein_coding protein_coding MGP_129S1SvImJ_T0102346.1 MGP_129S1SvImJ_G0040180.1 mouse_genomes_project 17 36947686 36947833 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0047926.1 MGP_129S1SvImJ_G0023810.1 mouse_genomes_project 17 47304191 47330294 - MGP_129S1SvImJ_P0047926 Tjap1 protein_coding protein_coding MGP_129S1SvImJ_T0047927.1 MGP_129S1SvImJ_G0023810.1 mouse_genomes_project 17 47304191 47330294 - MGP_129S1SvImJ_P0047927 Tjap1 protein_coding protein_coding MGP_129S1SvImJ_T0047928.1 MGP_129S1SvImJ_G0023810.1 mouse_genomes_project 17 47304191 47330294 - MGP_129S1SvImJ_P0047928 Tjap1 protein_coding protein_coding MGP_129S1SvImJ_T0047929.1 MGP_129S1SvImJ_G0023810.1 mouse_genomes_project 17 47307056 47310120 - MGP_129S1SvImJ_P0047929 Tjap1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0047820.1 MGP_129S1SvImJ_G0023793.1 mouse_genomes_project 17 46586860 46592357 - MGP_129S1SvImJ_P0047820 Hsp90ab1 protein_coding protein_coding MGP_129S1SvImJ_T0047821.1 MGP_129S1SvImJ_G0023793.1 mouse_genomes_project 17 46587943 46588822 - Hsp90ab1 protein_coding retained_intron MGP_129S1SvImJ_T0047822.1 MGP_129S1SvImJ_G0023793.1 mouse_genomes_project 17 46588103 46592339 - MGP_129S1SvImJ_P0047822 Hsp90ab1 protein_coding protein_coding MGP_129S1SvImJ_T0047823.1 MGP_129S1SvImJ_G0023793.1 mouse_genomes_project 17 46588663 46592341 - MGP_129S1SvImJ_P0047823 Hsp90ab1 protein_coding protein_coding MGP_129S1SvImJ_T0047824.1 MGP_129S1SvImJ_G0023793.1 mouse_genomes_project 17 46589530 46590668 - Hsp90ab1 protein_coding retained_intron MGP_129S1SvImJ_T0047825.1 MGP_129S1SvImJ_G0023793.1 mouse_genomes_project 17 46589748 46592341 - MGP_129S1SvImJ_P0047825 Hsp90ab1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047826.1 MGP_129S1SvImJ_G0023793.1 mouse_genomes_project 17 46590103 46592357 - Hsp90ab1 protein_coding retained_intron MGP_129S1SvImJ_T0047827.1 MGP_129S1SvImJ_G0023793.1 mouse_genomes_project 17 46590623 46591641 - MGP_129S1SvImJ_P0047827 Hsp90ab1 protein_coding protein_coding MGP_129S1SvImJ_T0102353.1 MGP_129S1SvImJ_G0040187.1 mouse_genomes_project 17 37549686 37550533 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0047151.1 MGP_129S1SvImJ_G0023581.1 mouse_genomes_project 17 34682994 34690428 + MGP_129S1SvImJ_P0047151 Agpat1 protein_coding protein_coding MGP_129S1SvImJ_T0047152.1 MGP_129S1SvImJ_G0023581.1 mouse_genomes_project 17 34683576 34690127 + MGP_129S1SvImJ_P0047152 Agpat1 protein_coding protein_coding MGP_129S1SvImJ_T0047153.1 MGP_129S1SvImJ_G0023581.1 mouse_genomes_project 17 34684591 34692201 + MGP_129S1SvImJ_P0047153 Agpat1 protein_coding protein_coding MGP_129S1SvImJ_T0047154.1 MGP_129S1SvImJ_G0023581.1 mouse_genomes_project 17 34684591 34691174 + MGP_129S1SvImJ_P0047154 Agpat1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047155.1 MGP_129S1SvImJ_G0023581.1 mouse_genomes_project 17 34684703 34691622 + MGP_129S1SvImJ_P0047155 Agpat1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047156.1 MGP_129S1SvImJ_G0023581.1 mouse_genomes_project 17 34687744 34692200 + MGP_129S1SvImJ_P0047156 Agpat1 protein_coding protein_coding MGP_129S1SvImJ_T0047157.1 MGP_129S1SvImJ_G0023581.1 mouse_genomes_project 17 34688335 34692170 + MGP_129S1SvImJ_P0047157 Agpat1 protein_coding protein_coding MGP_129S1SvImJ_T0047158.1 MGP_129S1SvImJ_G0023581.1 mouse_genomes_project 17 34688990 34689908 + Agpat1 protein_coding retained_intron MGP_129S1SvImJ_T0045986.1 MGP_129S1SvImJ_G0023308.1 mouse_genomes_project 17 23592819 23628109 - MGP_129S1SvImJ_P0045986 Tsc2 protein_coding protein_coding MGP_129S1SvImJ_T0045987.1 MGP_129S1SvImJ_G0023308.1 mouse_genomes_project 17 23593391 23628076 - MGP_129S1SvImJ_P0045987 Tsc2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0102282.1 MGP_129S1SvImJ_G0040116.1 mouse_genomes_project 17 16092843 16927976 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0006958.1 MGP_129S1SvImJ_G0005733.1 mouse_genomes_project 17 37545257 37562281 - Gm20497 lincRNA lincRNA MGP_129S1SvImJ_T0045806.1 MGP_129S1SvImJ_G0023259.1 mouse_genomes_project 17 22532715 22554162 - MGP_129S1SvImJ_P0045806 Mmp25 protein_coding protein_coding MGP_129S1SvImJ_T0102330.1 MGP_129S1SvImJ_G0040164.1 mouse_genomes_project 17 36158285 36163308 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0011442.1 MGP_129S1SvImJ_G0009558.1 mouse_genomes_project 17 28560389 28560561 + Gm27599 misc_RNA misc_RNA MGP_129S1SvImJ_T0047785.1 MGP_129S1SvImJ_G0023779.1 mouse_genomes_project 17 44569313 44660771 + MGP_129S1SvImJ_P0047785 Cyp39a1 protein_coding protein_coding MGP_129S1SvImJ_T0013239.1 MGP_129S1SvImJ_G0011328.1 mouse_genomes_project 17 12771558 12772297 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013313.1 MGP_129S1SvImJ_G0011402.1 mouse_genomes_project 17 83903496 83903866 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0046799.1 MGP_129S1SvImJ_G0023502.1 mouse_genomes_project 17 32163494 32192623 - MGP_129S1SvImJ_P0046799 Akap8l protein_coding protein_coding MGP_129S1SvImJ_T0048679.1 MGP_129S1SvImJ_G0024070.1 mouse_genomes_project 17 84435075 84435237 + MGP_129S1SvImJ_P0048679 Gm11096 protein_coding protein_coding MGP_129S1SvImJ_T0001004.1 MGP_129S1SvImJ_G0000934.1 mouse_genomes_project 17 8897176 8900023 - TEC TEC MGP_129S1SvImJ_T0047746.1 MGP_129S1SvImJ_G0023758.1 mouse_genomes_project 17 41508507 41511596 + MGP_129S1SvImJ_P0047746 Esp3 protein_coding protein_coding MGP_129S1SvImJ_T0045608.1 MGP_129S1SvImJ_G0023162.1 mouse_genomes_project 17 11899419 11900476 - MGP_129S1SvImJ_P0045608 protein_coding protein_coding MGP_129S1SvImJ_T0006946.1 MGP_129S1SvImJ_G0005723.1 mouse_genomes_project 17 33994404 33994509 - Gm26940 lincRNA lincRNA MGP_129S1SvImJ_T0048322.1 MGP_129S1SvImJ_G0023942.1 mouse_genomes_project 17 58613404 58626561 + MGP_129S1SvImJ_P0048322 1700061G19Rik protein_coding protein_coding MGP_129S1SvImJ_T0048323.1 MGP_129S1SvImJ_G0023942.1 mouse_genomes_project 17 58613430 58615746 + 1700061G19Rik protein_coding retained_intron MGP_129S1SvImJ_T0045400.1 MGP_129S1SvImJ_G0023100.1 mouse_genomes_project 17 509577 510237 + MGP_129S1SvImJ_P0045400 Cldn20 protein_coding protein_coding MGP_129S1SvImJ_T0013310.1 MGP_129S1SvImJ_G0011399.1 mouse_genomes_project 17 81685793 81686958 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0047661.1 MGP_129S1SvImJ_G0023694.1 mouse_genomes_project 17 37375452 37388868 - MGP_129S1SvImJ_P0047661 Mog protein_coding protein_coding MGP_129S1SvImJ_T0047662.1 MGP_129S1SvImJ_G0023694.1 mouse_genomes_project 17 37376212 37388669 - MGP_129S1SvImJ_P0047662 Mog protein_coding protein_coding MGP_129S1SvImJ_T0046322.1 MGP_129S1SvImJ_G0023389.1 mouse_genomes_project 17 25221078 25224838 - MGP_129S1SvImJ_P0046322 Nme4 protein_coding protein_coding MGP_129S1SvImJ_T0046323.1 MGP_129S1SvImJ_G0023389.1 mouse_genomes_project 17 25222744 25224803 - Nme4 protein_coding retained_intron MGP_129S1SvImJ_T0010245.1 MGP_129S1SvImJ_G0008361.1 mouse_genomes_project 17 94696600 94696745 + miRNA miRNA MGP_129S1SvImJ_T0045694.1 MGP_129S1SvImJ_G0023193.1 mouse_genomes_project 17 16092368 16548827 + MGP_129S1SvImJ_P0045694 Vmn2r97 protein_coding protein_coding MGP_129S1SvImJ_T0001019.1 MGP_129S1SvImJ_G0000948.1 mouse_genomes_project 17 55822867 55823193 + TEC TEC MGP_129S1SvImJ_T0048191.1 MGP_129S1SvImJ_G0023885.1 mouse_genomes_project 17 54129185 54517325 + MGP_129S1SvImJ_P0048191 Kcnh8 protein_coding protein_coding MGP_129S1SvImJ_T0048192.1 MGP_129S1SvImJ_G0023885.1 mouse_genomes_project 17 54481934 54516510 + Kcnh8 protein_coding retained_intron MGP_129S1SvImJ_T0047184.1 MGP_129S1SvImJ_G0023587.1 mouse_genomes_project 17 34826533 34843590 - MGP_129S1SvImJ_P0047184 C4b protein_coding protein_coding MGP_129S1SvImJ_T0047185.1 MGP_129S1SvImJ_G0023587.1 mouse_genomes_project 17 34826613 34844045 - MGP_129S1SvImJ_P0047185 C4b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0047186.1 MGP_129S1SvImJ_G0023587.1 mouse_genomes_project 17 34826613 34844050 - MGP_129S1SvImJ_P0047186 C4b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0047187.1 MGP_129S1SvImJ_G0023587.1 mouse_genomes_project 17 34826625 34827393 - C4b protein_coding retained_intron MGP_129S1SvImJ_T0017624.1 MGP_129S1SvImJ_G0015356.1 mouse_genomes_project 17 88850996 88868652 - Six3os1 processed_transcript antisense MGP_129S1SvImJ_T0017625.1 MGP_129S1SvImJ_G0015356.1 mouse_genomes_project 17 88852279 88871678 - Six3os1 processed_transcript antisense MGP_129S1SvImJ_T0017626.1 MGP_129S1SvImJ_G0015356.1 mouse_genomes_project 17 88859221 88871671 - Six3os1 processed_transcript antisense MGP_129S1SvImJ_T0017627.1 MGP_129S1SvImJ_G0015356.1 mouse_genomes_project 17 88859788 88871704 - Six3os1 processed_transcript antisense MGP_129S1SvImJ_T0017628.1 MGP_129S1SvImJ_G0015356.1 mouse_genomes_project 17 88861409 88871646 - Six3os1 processed_transcript antisense MGP_129S1SvImJ_T0017629.1 MGP_129S1SvImJ_G0015356.1 mouse_genomes_project 17 88862351 88871581 - Six3os1 processed_transcript antisense MGP_129S1SvImJ_T0017630.1 MGP_129S1SvImJ_G0015356.1 mouse_genomes_project 17 88863096 88871691 - Six3os1 processed_transcript retained_intron MGP_129S1SvImJ_T0017631.1 MGP_129S1SvImJ_G0015356.1 mouse_genomes_project 17 88863479 88871527 - Six3os1 processed_transcript antisense MGP_129S1SvImJ_T0017632.1 MGP_129S1SvImJ_G0015356.1 mouse_genomes_project 17 88863479 88871529 - Six3os1 processed_transcript antisense MGP_129S1SvImJ_T0017633.1 MGP_129S1SvImJ_G0015356.1 mouse_genomes_project 17 88864732 88871581 - Six3os1 processed_transcript antisense MGP_129S1SvImJ_T0017634.1 MGP_129S1SvImJ_G0015356.1 mouse_genomes_project 17 88865060 88869550 - Six3os1 processed_transcript antisense MGP_129S1SvImJ_T0017635.1 MGP_129S1SvImJ_G0015356.1 mouse_genomes_project 17 88867010 88871379 - Six3os1 processed_transcript antisense MGP_129S1SvImJ_T0017636.1 MGP_129S1SvImJ_G0015356.1 mouse_genomes_project 17 88867011 88871664 - Six3os1 processed_transcript antisense MGP_129S1SvImJ_T0048170.1 MGP_129S1SvImJ_G0023880.1 mouse_genomes_project 17 51388295 51589149 - MGP_129S1SvImJ_P0048170 Rftn1 protein_coding protein_coding MGP_129S1SvImJ_T0048171.1 MGP_129S1SvImJ_G0023880.1 mouse_genomes_project 17 51436025 51589327 - Rftn1 protein_coding retained_intron MGP_129S1SvImJ_T0102313.1 MGP_129S1SvImJ_G0040147.1 mouse_genomes_project 17 33810392 33814259 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0045938.1 MGP_129S1SvImJ_G0023298.1 mouse_genomes_project 17 23407466 23422650 + MGP_129S1SvImJ_P0045938 Eci1 protein_coding protein_coding MGP_129S1SvImJ_T0045739.1 MGP_129S1SvImJ_G0023229.1 mouse_genomes_project 17 20189842 20205086 + MGP_129S1SvImJ_P0045739 Zfp51 protein_coding protein_coding MGP_129S1SvImJ_T0046093.1 MGP_129S1SvImJ_G0023337.1 mouse_genomes_project 17 24091417 24114842 - MGP_129S1SvImJ_P0046093 Tmem204 protein_coding protein_coding MGP_129S1SvImJ_T0046094.1 MGP_129S1SvImJ_G0023337.1 mouse_genomes_project 17 24091619 24111887 - MGP_129S1SvImJ_P0046094 Tmem204 protein_coding protein_coding MGP_129S1SvImJ_T0047730.1 MGP_129S1SvImJ_G0023742.1 mouse_genomes_project 17 38945818 38949531 - MGP_129S1SvImJ_P0047730 Esp36 protein_coding protein_coding MGP_129S1SvImJ_T0100838.1 MGP_129S1SvImJ_G0038905.1 mouse_genomes_project 17 74107382 74107458 + Gm22858 snoRNA snoRNA MGP_129S1SvImJ_T0010237.1 MGP_129S1SvImJ_G0008353.1 mouse_genomes_project 17 58990272 58990329 - Mir6978 miRNA miRNA MGP_129S1SvImJ_T0048140.1 MGP_129S1SvImJ_G0023873.1 mouse_genomes_project 17 49712144 49725630 - MGP_129S1SvImJ_P0048140 Apobec2 protein_coding protein_coding MGP_129S1SvImJ_T0045685.1 MGP_129S1SvImJ_G0023185.1 mouse_genomes_project 17 15849755 15861642 - MGP_129S1SvImJ_P0045685 Has1 protein_coding protein_coding MGP_129S1SvImJ_T0046596.1 MGP_129S1SvImJ_G0023453.1 mouse_genomes_project 17 28409542 28419630 - MGP_129S1SvImJ_P0046596 Pxt1 protein_coding protein_coding MGP_129S1SvImJ_T0046774.1 MGP_129S1SvImJ_G0023496.1 mouse_genomes_project 17 31755607 31849174 - MGP_129S1SvImJ_P0046774 Hsf2bp protein_coding protein_coding MGP_129S1SvImJ_T0046775.1 MGP_129S1SvImJ_G0023496.1 mouse_genomes_project 17 31825984 31837887 - Hsf2bp protein_coding processed_transcript MGP_129S1SvImJ_T0046156.1 MGP_129S1SvImJ_G0023350.1 mouse_genomes_project 17 24364183 24367420 + MGP_129S1SvImJ_P0046156 Prss28 protein_coding protein_coding MGP_129S1SvImJ_T0048163.1 MGP_129S1SvImJ_G0023879.1 mouse_genomes_project 17 50986218 51136582 + Kif6 protein_coding retained_intron MGP_129S1SvImJ_T0048164.1 MGP_129S1SvImJ_G0023879.1 mouse_genomes_project 17 50986221 51052536 + MGP_129S1SvImJ_P0048164 Kif6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048165.1 MGP_129S1SvImJ_G0023879.1 mouse_genomes_project 17 50986254 51299914 + MGP_129S1SvImJ_P0048165 Kif6 protein_coding protein_coding MGP_129S1SvImJ_T0048166.1 MGP_129S1SvImJ_G0023879.1 mouse_genomes_project 17 51092470 51136582 + Kif6 protein_coding retained_intron MGP_129S1SvImJ_T0048167.1 MGP_129S1SvImJ_G0023879.1 mouse_genomes_project 17 51118541 51136584 + Kif6 protein_coding retained_intron MGP_129S1SvImJ_T0048168.1 MGP_129S1SvImJ_G0023879.1 mouse_genomes_project 17 51135104 51140229 + Kif6 protein_coding retained_intron MGP_129S1SvImJ_T0048169.1 MGP_129S1SvImJ_G0023879.1 mouse_genomes_project 17 51277786 51299914 + Kif6 protein_coding retained_intron MGP_129S1SvImJ_T0048423.1 MGP_129S1SvImJ_G0023984.1 mouse_genomes_project 17 68256576 68284442 - MGP_129S1SvImJ_P0048423 Ndufv2 protein_coding protein_coding MGP_129S1SvImJ_T0048424.1 MGP_129S1SvImJ_G0023984.1 mouse_genomes_project 17 68256629 68284412 - MGP_129S1SvImJ_P0048424 Ndufv2 protein_coding protein_coding MGP_129S1SvImJ_T0048425.1 MGP_129S1SvImJ_G0023984.1 mouse_genomes_project 17 68267301 68284456 - MGP_129S1SvImJ_P0048425 Ndufv2 protein_coding protein_coding MGP_129S1SvImJ_T0046628.1 MGP_129S1SvImJ_G0023459.1 mouse_genomes_project 17 28662779 28752235 - MGP_129S1SvImJ_P0046628 Cpne5 protein_coding protein_coding MGP_129S1SvImJ_T0046629.1 MGP_129S1SvImJ_G0023459.1 mouse_genomes_project 17 28664145 28693244 - Cpne5 protein_coding processed_transcript MGP_129S1SvImJ_T0046630.1 MGP_129S1SvImJ_G0023459.1 mouse_genomes_project 17 28678564 28685801 - Cpne5 protein_coding processed_transcript MGP_129S1SvImJ_T0046631.1 MGP_129S1SvImJ_G0023459.1 mouse_genomes_project 17 28697471 28752197 - MGP_129S1SvImJ_P0046631 Cpne5 protein_coding protein_coding MGP_129S1SvImJ_T0046632.1 MGP_129S1SvImJ_G0023459.1 mouse_genomes_project 17 28731521 28752150 - Cpne5 protein_coding retained_intron MGP_129S1SvImJ_T0046652.1 MGP_129S1SvImJ_G0023464.1 mouse_genomes_project 17 28889043 28909713 + MGP_129S1SvImJ_P0046652 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046653.1 MGP_129S1SvImJ_G0023464.1 mouse_genomes_project 17 28889061 28893189 + protein_coding processed_transcript MGP_129S1SvImJ_T0046654.1 MGP_129S1SvImJ_G0023464.1 mouse_genomes_project 17 28889071 28895126 + protein_coding retained_intron MGP_129S1SvImJ_T0046655.1 MGP_129S1SvImJ_G0023464.1 mouse_genomes_project 17 28889071 28909606 + MGP_129S1SvImJ_P0046655 protein_coding protein_coding MGP_129S1SvImJ_T0046656.1 MGP_129S1SvImJ_G0023464.1 mouse_genomes_project 17 28893566 28896081 + protein_coding retained_intron MGP_129S1SvImJ_T0046657.1 MGP_129S1SvImJ_G0023464.1 mouse_genomes_project 17 28897081 28904972 + protein_coding retained_intron MGP_129S1SvImJ_T0046658.1 MGP_129S1SvImJ_G0023464.1 mouse_genomes_project 17 28897093 28904343 + protein_coding retained_intron MGP_129S1SvImJ_T0046659.1 MGP_129S1SvImJ_G0023464.1 mouse_genomes_project 17 28906584 28908501 + protein_coding processed_transcript MGP_129S1SvImJ_T0048308.1 MGP_129S1SvImJ_G0023932.1 mouse_genomes_project 17 58317354 58329886 - MGP_129S1SvImJ_P0048308 Lonp1 protein_coding protein_coding MGP_129S1SvImJ_T0003806.1 MGP_129S1SvImJ_G0003422.1 mouse_genomes_project 17 73263957 73291920 + Gm28727 antisense antisense MGP_129S1SvImJ_T0047702.1 MGP_129S1SvImJ_G0023720.1 mouse_genomes_project 17 38032485 38049749 - MGP_129S1SvImJ_P0047702 protein_coding protein_coding MGP_129S1SvImJ_T0102015.1 MGP_129S1SvImJ_G0039867.1 mouse_genomes_project 17 41660228 41675025 + unitary_pseudogene unitary_pseudogene MGP_129S1SvImJ_T0045705.1 MGP_129S1SvImJ_G0023204.1 mouse_genomes_project 17 18883165 18911269 - MGP_129S1SvImJ_P0045705 Vmn2r105 protein_coding protein_coding MGP_129S1SvImJ_T0045542.1 MGP_129S1SvImJ_G0023144.1 mouse_genomes_project 17 9874101 9963678 - MGP_129S1SvImJ_P0045542 Map3k4 protein_coding protein_coding MGP_129S1SvImJ_T0006947.1 MGP_129S1SvImJ_G0005724.1 mouse_genomes_project 17 34252592 34253800 + Gm20506 lincRNA lincRNA MGP_129S1SvImJ_T0047620.1 MGP_129S1SvImJ_G0023684.1 mouse_genomes_project 17 37219309 37228762 + MGP_129S1SvImJ_P0047620 Trim10 protein_coding protein_coding MGP_129S1SvImJ_T0013247.1 MGP_129S1SvImJ_G0011336.1 mouse_genomes_project 17 26822392 26822661 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003742.1 MGP_129S1SvImJ_G0003373.1 mouse_genomes_project 17 11521505 11522468 - Gm16049 antisense antisense MGP_129S1SvImJ_T0017594.1 MGP_129S1SvImJ_G0015349.1 mouse_genomes_project 17 34693235 34706032 - Gm20460 processed_transcript processed_transcript MGP_129S1SvImJ_T0045758.1 MGP_129S1SvImJ_G0023241.1 mouse_genomes_project 17 20698347 20703810 - MGP_129S1SvImJ_P0045758 Zfp942 protein_coding protein_coding MGP_129S1SvImJ_T0047117.1 MGP_129S1SvImJ_G0023576.1 mouse_genomes_project 17 34635615 34661426 + MGP_129S1SvImJ_P0047117 Notch4 protein_coding protein_coding MGP_129S1SvImJ_T0047118.1 MGP_129S1SvImJ_G0023576.1 mouse_genomes_project 17 34635645 34636964 + Notch4 protein_coding processed_transcript MGP_129S1SvImJ_T0047119.1 MGP_129S1SvImJ_G0023576.1 mouse_genomes_project 17 34635684 34661154 + MGP_129S1SvImJ_P0047119 Notch4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047120.1 MGP_129S1SvImJ_G0023576.1 mouse_genomes_project 17 34636483 34636925 + Notch4 protein_coding retained_intron MGP_129S1SvImJ_T0047121.1 MGP_129S1SvImJ_G0023576.1 mouse_genomes_project 17 34649409 34655394 + Notch4 protein_coding processed_transcript MGP_129S1SvImJ_T0047122.1 MGP_129S1SvImJ_G0023576.1 mouse_genomes_project 17 34656804 34659545 + MGP_129S1SvImJ_P0047122 Notch4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047123.1 MGP_129S1SvImJ_G0023576.1 mouse_genomes_project 17 34656804 34659597 + MGP_129S1SvImJ_P0047123 Notch4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047124.1 MGP_129S1SvImJ_G0023576.1 mouse_genomes_project 17 34657490 34658575 + Notch4 protein_coding retained_intron MGP_129S1SvImJ_T0047125.1 MGP_129S1SvImJ_G0023576.1 mouse_genomes_project 17 34658587 34659546 + Notch4 protein_coding retained_intron MGP_129S1SvImJ_T0047126.1 MGP_129S1SvImJ_G0023576.1 mouse_genomes_project 17 34659197 34660396 + Notch4 protein_coding retained_intron MGP_129S1SvImJ_T0047127.1 MGP_129S1SvImJ_G0023576.1 mouse_genomes_project 17 34659867 34660424 + Notch4 protein_coding processed_transcript MGP_129S1SvImJ_T0047128.1 MGP_129S1SvImJ_G0023576.1 mouse_genomes_project 17 34659963 34660741 + Notch4 protein_coding processed_transcript MGP_129S1SvImJ_T0013316.1 MGP_129S1SvImJ_G0011405.1 mouse_genomes_project 17 88740301 88740674 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048449.1 MGP_129S1SvImJ_G0023992.1 mouse_genomes_project 17 69983661 70114963 + MGP_129S1SvImJ_P0048449 Lama1 protein_coding protein_coding MGP_129S1SvImJ_T0010222.1 MGP_129S1SvImJ_G0008338.1 mouse_genomes_project 17 34969385 34969449 - Mir6972 miRNA miRNA MGP_129S1SvImJ_T0099585.1 MGP_129S1SvImJ_G0037652.1 mouse_genomes_project 17 98118323 98118432 - Gm22593 snRNA snRNA MGP_129S1SvImJ_T0046633.1 MGP_129S1SvImJ_G0023460.1 mouse_genomes_project 17 28765279 28778983 - MGP_129S1SvImJ_P0046633 Ppil1 protein_coding protein_coding MGP_129S1SvImJ_T0046634.1 MGP_129S1SvImJ_G0023460.1 mouse_genomes_project 17 28765700 28771365 - Ppil1 protein_coding retained_intron MGP_129S1SvImJ_T0046635.1 MGP_129S1SvImJ_G0023460.1 mouse_genomes_project 17 28765739 28778739 - MGP_129S1SvImJ_P0046635 Ppil1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046636.1 MGP_129S1SvImJ_G0023460.1 mouse_genomes_project 17 28775923 28778765 - Ppil1 protein_coding processed_transcript MGP_129S1SvImJ_T0047919.1 MGP_129S1SvImJ_G0023808.1 mouse_genomes_project 17 47294537 47298894 + MGP_129S1SvImJ_P0047919 Yipf3 protein_coding protein_coding MGP_129S1SvImJ_T0047920.1 MGP_129S1SvImJ_G0023808.1 mouse_genomes_project 17 47294582 47297949 + MGP_129S1SvImJ_P0047920 Yipf3 protein_coding protein_coding MGP_129S1SvImJ_T0047921.1 MGP_129S1SvImJ_G0023808.1 mouse_genomes_project 17 47294602 47298462 + Yipf3 protein_coding retained_intron MGP_129S1SvImJ_T0047922.1 MGP_129S1SvImJ_G0023808.1 mouse_genomes_project 17 47295486 47298365 + MGP_129S1SvImJ_P0047922 Yipf3 protein_coding protein_coding MGP_129S1SvImJ_T0047923.1 MGP_129S1SvImJ_G0023808.1 mouse_genomes_project 17 47296542 47297454 + Yipf3 protein_coding processed_transcript MGP_129S1SvImJ_T0047924.1 MGP_129S1SvImJ_G0023808.1 mouse_genomes_project 17 47297801 47298478 + Yipf3 protein_coding processed_transcript MGP_129S1SvImJ_T0048327.1 MGP_129S1SvImJ_G0023946.1 mouse_genomes_project 17 58741717 58743692 + MGP_129S1SvImJ_P0048327 Alkbh7 protein_coding protein_coding MGP_129S1SvImJ_T0048328.1 MGP_129S1SvImJ_G0023946.1 mouse_genomes_project 17 58741721 58743703 + MGP_129S1SvImJ_P0048328 Alkbh7 protein_coding protein_coding MGP_129S1SvImJ_T0048329.1 MGP_129S1SvImJ_G0023946.1 mouse_genomes_project 17 58742858 58743516 + Alkbh7 protein_coding retained_intron MGP_129S1SvImJ_T0046160.1 MGP_129S1SvImJ_G0023353.1 mouse_genomes_project 17 24430240 24431785 + MGP_129S1SvImJ_P0046160 Tpsb2 protein_coding protein_coding MGP_129S1SvImJ_T0045710.1 MGP_129S1SvImJ_G0023209.1 mouse_genomes_project 17 19237543 19305966 - MGP_129S1SvImJ_P0045710 protein_coding protein_coding MGP_129S1SvImJ_T0006945.1 MGP_129S1SvImJ_G0005722.1 mouse_genomes_project 17 33912750 36503004 + lincRNA lincRNA MGP_129S1SvImJ_T0006955.1 MGP_129S1SvImJ_G0005722.1 mouse_genomes_project 17 36314673 36502223 + lincRNA lincRNA MGP_129S1SvImJ_T0006956.1 MGP_129S1SvImJ_G0005722.1 mouse_genomes_project 17 36314673 36502224 + lincRNA lincRNA MGP_129S1SvImJ_T0006954.1 MGP_129S1SvImJ_G0005731.1 mouse_genomes_project 17 36214697 36216563 + Gm20508 lincRNA lincRNA MGP_129S1SvImJ_T0045834.1 MGP_129S1SvImJ_G0023271.1 mouse_genomes_project 17 22695839 22704827 - MGP_129S1SvImJ_P0045834 Flywch2 protein_coding protein_coding MGP_129S1SvImJ_T0045835.1 MGP_129S1SvImJ_G0023271.1 mouse_genomes_project 17 22695882 22698717 - MGP_129S1SvImJ_P0045835 Flywch2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045836.1 MGP_129S1SvImJ_G0023271.1 mouse_genomes_project 17 22695915 22704798 - MGP_129S1SvImJ_P0045836 Flywch2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0013232.1 MGP_129S1SvImJ_G0011321.1 mouse_genomes_project 17 8501585 8501995 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0046954.1 MGP_129S1SvImJ_G0023540.1 mouse_genomes_project 17 33786409 33795852 + MGP_129S1SvImJ_P0046954 Cd320 protein_coding protein_coding MGP_129S1SvImJ_T0046955.1 MGP_129S1SvImJ_G0023540.1 mouse_genomes_project 17 33786421 33789637 + Cd320 protein_coding retained_intron MGP_129S1SvImJ_T0046956.1 MGP_129S1SvImJ_G0023540.1 mouse_genomes_project 17 33786744 33794881 + MGP_129S1SvImJ_P0046956 Cd320 protein_coding protein_coding MGP_129S1SvImJ_T0046906.1 MGP_129S1SvImJ_G0023533.1 mouse_genomes_project 17 33561223 33604359 - MGP_129S1SvImJ_P0046906 Hnrnpm protein_coding protein_coding MGP_129S1SvImJ_T0046907.1 MGP_129S1SvImJ_G0023533.1 mouse_genomes_project 17 33561225 33602891 - MGP_129S1SvImJ_P0046907 Hnrnpm protein_coding protein_coding MGP_129S1SvImJ_T0046908.1 MGP_129S1SvImJ_G0023533.1 mouse_genomes_project 17 33561226 33602887 - MGP_129S1SvImJ_P0046908 Hnrnpm protein_coding protein_coding MGP_129S1SvImJ_T0046909.1 MGP_129S1SvImJ_G0023533.1 mouse_genomes_project 17 33561229 33576678 - MGP_129S1SvImJ_P0046909 Hnrnpm protein_coding protein_coding MGP_129S1SvImJ_T0046910.1 MGP_129S1SvImJ_G0023533.1 mouse_genomes_project 17 33561229 33602887 - MGP_129S1SvImJ_P0046910 Hnrnpm protein_coding protein_coding MGP_129S1SvImJ_T0046911.1 MGP_129S1SvImJ_G0023533.1 mouse_genomes_project 17 33566628 33584069 - MGP_129S1SvImJ_P0046911 Hnrnpm protein_coding protein_coding MGP_129S1SvImJ_T0046912.1 MGP_129S1SvImJ_G0023533.1 mouse_genomes_project 17 33586136 33602884 - Hnrnpm protein_coding retained_intron MGP_129S1SvImJ_T0046913.1 MGP_129S1SvImJ_G0023533.1 mouse_genomes_project 17 33594438 33602900 - Hnrnpm protein_coding retained_intron MGP_129S1SvImJ_T0048306.1 MGP_129S1SvImJ_G0023930.1 mouse_genomes_project 17 58310581 58312889 - MGP_129S1SvImJ_P0048306 2410015M20Rik protein_coding protein_coding MGP_129S1SvImJ_T0047990.1 MGP_129S1SvImJ_G0023830.1 mouse_genomes_project 17 47813277 47814417 - Gnmt protein_coding retained_intron MGP_129S1SvImJ_T0047991.1 MGP_129S1SvImJ_G0023830.1 mouse_genomes_project 17 47813277 47816626 - MGP_129S1SvImJ_P0047991 Gnmt protein_coding protein_coding MGP_129S1SvImJ_T0006927.1 MGP_129S1SvImJ_G0005709.1 mouse_genomes_project 17 27935596 27936364 - Gm20109 lincRNA lincRNA MGP_129S1SvImJ_T0013234.1 MGP_129S1SvImJ_G0011323.1 mouse_genomes_project 17 9834374 9834910 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001024.1 MGP_129S1SvImJ_G0000953.1 mouse_genomes_project 17 92026721 92026902 + TEC TEC MGP_129S1SvImJ_T0048175.1 MGP_129S1SvImJ_G0023883.1 mouse_genomes_project 17 52167993 52479914 - MGP_129S1SvImJ_P0048175 Tbc1d5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048176.1 MGP_129S1SvImJ_G0023883.1 mouse_genomes_project 17 52167999 52646614 - MGP_129S1SvImJ_P0048176 Tbc1d5 protein_coding protein_coding MGP_129S1SvImJ_T0045522.1 MGP_129S1SvImJ_G0023139.1 mouse_genomes_project 17 7214004 7217207 - MGP_129S1SvImJ_P0045522 Pabpc6 protein_coding protein_coding MGP_129S1SvImJ_T0045939.1 MGP_129S1SvImJ_G0023299.1 mouse_genomes_project 17 23423360 23427210 - Dnase1l2 protein_coding retained_intron MGP_129S1SvImJ_T0045940.1 MGP_129S1SvImJ_G0023299.1 mouse_genomes_project 17 23423366 23428114 - MGP_129S1SvImJ_P0045940 Dnase1l2 protein_coding protein_coding MGP_129S1SvImJ_T0045941.1 MGP_129S1SvImJ_G0023299.1 mouse_genomes_project 17 23425625 23428093 - MGP_129S1SvImJ_P0045941 Dnase1l2 protein_coding protein_coding MGP_129S1SvImJ_T0045942.1 MGP_129S1SvImJ_G0023299.1 mouse_genomes_project 17 23425816 23427162 - MGP_129S1SvImJ_P0045942 Dnase1l2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045943.1 MGP_129S1SvImJ_G0023299.1 mouse_genomes_project 17 23426536 23427710 - MGP_129S1SvImJ_P0045943 Dnase1l2 protein_coding protein_coding MGP_129S1SvImJ_T0045944.1 MGP_129S1SvImJ_G0023299.1 mouse_genomes_project 17 23426734 23428113 - MGP_129S1SvImJ_P0045944 Dnase1l2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045579.1 MGP_129S1SvImJ_G0023157.1 mouse_genomes_project 17 10657811 10699257 - MGP_129S1SvImJ_P0045579 protein_coding protein_coding MGP_129S1SvImJ_T0045580.1 MGP_129S1SvImJ_G0023157.1 mouse_genomes_project 17 10657814 10698700 - MGP_129S1SvImJ_P0045580 protein_coding protein_coding MGP_129S1SvImJ_T0045581.1 MGP_129S1SvImJ_G0023157.1 mouse_genomes_project 17 10665968 10698571 - MGP_129S1SvImJ_P0045581 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0045582.1 MGP_129S1SvImJ_G0023157.1 mouse_genomes_project 17 10671935 10692922 - MGP_129S1SvImJ_P0045582 protein_coding protein_coding MGP_129S1SvImJ_T0045583.1 MGP_129S1SvImJ_G0023157.1 mouse_genomes_project 17 10672938 10675133 - protein_coding processed_transcript MGP_129S1SvImJ_T0102308.1 MGP_129S1SvImJ_G0040142.1 mouse_genomes_project 17 22078717 22079368 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0045703.1 MGP_129S1SvImJ_G0023202.1 mouse_genomes_project 17 18767932 18768763 - MGP_129S1SvImJ_P0045703 protein_coding protein_coding MGP_129S1SvImJ_T0048109.1 MGP_129S1SvImJ_G0023865.1 mouse_genomes_project 17 49515926 49530307 + MGP_129S1SvImJ_P0048109 Trem3 protein_coding protein_coding MGP_129S1SvImJ_T0102285.1 MGP_129S1SvImJ_G0040119.1 mouse_genomes_project 17 16978058 16978184 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0006949.1 MGP_129S1SvImJ_G0005726.1 mouse_genomes_project 17 34722702 34725834 - Gm20461 lincRNA lincRNA MGP_129S1SvImJ_T0047296.1 MGP_129S1SvImJ_G0023608.1 mouse_genomes_project 17 35161203 35162467 - Msh5 protein_coding processed_transcript MGP_129S1SvImJ_T0047297.1 MGP_129S1SvImJ_G0023608.1 mouse_genomes_project 17 35161203 35183076 - MGP_129S1SvImJ_P0047297 Msh5 protein_coding protein_coding MGP_129S1SvImJ_T0047298.1 MGP_129S1SvImJ_G0023608.1 mouse_genomes_project 17 35161203 35181040 - MGP_129S1SvImJ_P0047298 Msh5 protein_coding protein_coding MGP_129S1SvImJ_T0047299.1 MGP_129S1SvImJ_G0023608.1 mouse_genomes_project 17 35161207 35165890 - MGP_129S1SvImJ_P0047299 Msh5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047300.1 MGP_129S1SvImJ_G0023608.1 mouse_genomes_project 17 35161281 35180960 - MGP_129S1SvImJ_P0047300 Msh5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047301.1 MGP_129S1SvImJ_G0023608.1 mouse_genomes_project 17 35161281 35180960 - MGP_129S1SvImJ_P0047301 Msh5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047302.1 MGP_129S1SvImJ_G0023608.1 mouse_genomes_project 17 35169703 35183095 - MGP_129S1SvImJ_P0047302 Msh5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047303.1 MGP_129S1SvImJ_G0023608.1 mouse_genomes_project 17 35171756 35178185 - Msh5 protein_coding retained_intron MGP_129S1SvImJ_T0047304.1 MGP_129S1SvImJ_G0023608.1 mouse_genomes_project 17 35171756 35180943 - Msh5 protein_coding retained_intron MGP_129S1SvImJ_T0047305.1 MGP_129S1SvImJ_G0023608.1 mouse_genomes_project 17 35178383 35180534 - Msh5 protein_coding retained_intron MGP_129S1SvImJ_T0047306.1 MGP_129S1SvImJ_G0023608.1 mouse_genomes_project 17 35178392 35179429 - Msh5 protein_coding retained_intron MGP_129S1SvImJ_T0047307.1 MGP_129S1SvImJ_G0023608.1 mouse_genomes_project 17 35178517 35180938 - MGP_129S1SvImJ_P0047307 Msh5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046262.1 MGP_129S1SvImJ_G0023377.1 mouse_genomes_project 17 24942097 24958712 - Wdr90 protein_coding retained_intron MGP_129S1SvImJ_T0046263.1 MGP_129S1SvImJ_G0023377.1 mouse_genomes_project 17 24942097 24958804 - MGP_129S1SvImJ_P0046263 Wdr90 protein_coding protein_coding MGP_129S1SvImJ_T0046264.1 MGP_129S1SvImJ_G0023377.1 mouse_genomes_project 17 24942099 24958797 - Wdr90 protein_coding retained_intron MGP_129S1SvImJ_T0046265.1 MGP_129S1SvImJ_G0023377.1 mouse_genomes_project 17 24942394 24958830 - MGP_129S1SvImJ_P0046265 Wdr90 protein_coding protein_coding MGP_129S1SvImJ_T0046266.1 MGP_129S1SvImJ_G0023377.1 mouse_genomes_project 17 24942714 24943821 - Wdr90 protein_coding retained_intron MGP_129S1SvImJ_T0046267.1 MGP_129S1SvImJ_G0023377.1 mouse_genomes_project 17 24945895 24949087 - Wdr90 protein_coding retained_intron MGP_129S1SvImJ_T0046268.1 MGP_129S1SvImJ_G0023377.1 mouse_genomes_project 17 24947279 24949194 - Wdr90 protein_coding retained_intron MGP_129S1SvImJ_T0046269.1 MGP_129S1SvImJ_G0023377.1 mouse_genomes_project 17 24949237 24951217 - Wdr90 protein_coding retained_intron MGP_129S1SvImJ_T0046270.1 MGP_129S1SvImJ_G0023377.1 mouse_genomes_project 17 24950661 24958804 - Wdr90 protein_coding retained_intron MGP_129S1SvImJ_T0046271.1 MGP_129S1SvImJ_G0023377.1 mouse_genomes_project 17 24951151 24952621 - Wdr90 protein_coding retained_intron MGP_129S1SvImJ_T0046272.1 MGP_129S1SvImJ_G0023377.1 mouse_genomes_project 17 24953105 24956555 - MGP_129S1SvImJ_P0046272 Wdr90 protein_coding protein_coding MGP_129S1SvImJ_T0099570.1 MGP_129S1SvImJ_G0037637.1 mouse_genomes_project 17 61373964 61374071 - Gm23203 snRNA snRNA MGP_129S1SvImJ_T0045586.1 MGP_129S1SvImJ_G0023160.1 mouse_genomes_project 17 11224650 11323715 - Tcte2 protein_coding processed_transcript MGP_129S1SvImJ_T0045587.1 MGP_129S1SvImJ_G0023160.1 mouse_genomes_project 17 11228096 11523398 - Tcte2 protein_coding processed_transcript MGP_129S1SvImJ_T0045588.1 MGP_129S1SvImJ_G0023160.1 mouse_genomes_project 17 11228096 11426978 - Tcte2 protein_coding processed_transcript MGP_129S1SvImJ_T0045589.1 MGP_129S1SvImJ_G0023160.1 mouse_genomes_project 17 11473027 11523398 - MGP_129S1SvImJ_P0045589 Tcte2 protein_coding protein_coding MGP_129S1SvImJ_T0045590.1 MGP_129S1SvImJ_G0023160.1 mouse_genomes_project 17 11473033 11523422 - MGP_129S1SvImJ_P0045590 Tcte2 protein_coding protein_coding MGP_129S1SvImJ_T0045591.1 MGP_129S1SvImJ_G0023160.1 mouse_genomes_project 17 11474614 11523387 - MGP_129S1SvImJ_P0045591 Tcte2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045592.1 MGP_129S1SvImJ_G0023160.1 mouse_genomes_project 17 11474632 11495104 - MGP_129S1SvImJ_P0045592 Tcte2 protein_coding protein_coding MGP_129S1SvImJ_T0045593.1 MGP_129S1SvImJ_G0023160.1 mouse_genomes_project 17 11477019 11523406 - MGP_129S1SvImJ_P0045593 Tcte2 protein_coding protein_coding MGP_129S1SvImJ_T0045594.1 MGP_129S1SvImJ_G0023160.1 mouse_genomes_project 17 11477019 11523621 - MGP_129S1SvImJ_P0045594 Tcte2 protein_coding protein_coding MGP_129S1SvImJ_T0045595.1 MGP_129S1SvImJ_G0023160.1 mouse_genomes_project 17 11477019 11523845 - MGP_129S1SvImJ_P0045595 Tcte2 protein_coding protein_coding MGP_129S1SvImJ_T0047697.1 MGP_129S1SvImJ_G0023717.1 mouse_genomes_project 17 37990272 37991263 - Olfr112 protein_coding processed_transcript MGP_129S1SvImJ_T0047698.1 MGP_129S1SvImJ_G0023717.1 mouse_genomes_project 17 37990283 37994342 - MGP_129S1SvImJ_P0047698 Olfr112 protein_coding protein_coding MGP_129S1SvImJ_T0047699.1 MGP_129S1SvImJ_G0023717.1 mouse_genomes_project 17 37990454 37993954 - MGP_129S1SvImJ_P0047699 Olfr112 protein_coding protein_coding MGP_129S1SvImJ_T0047179.1 MGP_129S1SvImJ_G0023586.1 mouse_genomes_project 17 34729002 34736931 + MGP_129S1SvImJ_P0047179 Atf6b protein_coding protein_coding MGP_129S1SvImJ_T0047180.1 MGP_129S1SvImJ_G0023586.1 mouse_genomes_project 17 34729057 34731004 + MGP_129S1SvImJ_P0047180 Atf6b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047181.1 MGP_129S1SvImJ_G0023586.1 mouse_genomes_project 17 34729057 34731059 + MGP_129S1SvImJ_P0047181 Atf6b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047182.1 MGP_129S1SvImJ_G0023586.1 mouse_genomes_project 17 34729067 34736736 + MGP_129S1SvImJ_P0047182 Atf6b protein_coding protein_coding MGP_129S1SvImJ_T0047183.1 MGP_129S1SvImJ_G0023586.1 mouse_genomes_project 17 34733483 34733960 + Atf6b protein_coding retained_intron MGP_129S1SvImJ_T0047405.1 MGP_129S1SvImJ_G0023634.1 mouse_genomes_project 17 35417235 35422003 + MGP_129S1SvImJ_P0047405 H2-D1 protein_coding protein_coding MGP_129S1SvImJ_T0047407.1 MGP_129S1SvImJ_G0023634.1 mouse_genomes_project 17 35417608 35422003 + MGP_129S1SvImJ_P0047407 H2-D1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0010187.1 MGP_129S1SvImJ_G0008303.1 mouse_genomes_project 17 10533543 10533657 - Gm24085 miRNA miRNA MGP_129S1SvImJ_T0047724.1 MGP_129S1SvImJ_G0023739.1 mouse_genomes_project 17 38787819 38803191 + MGP_129S1SvImJ_P0047724 Olfr138 protein_coding protein_coding MGP_129S1SvImJ_T0047725.1 MGP_129S1SvImJ_G0023739.1 mouse_genomes_project 17 38787820 38804051 + MGP_129S1SvImJ_P0047725 Olfr138 protein_coding protein_coding MGP_129S1SvImJ_T0047726.1 MGP_129S1SvImJ_G0023739.1 mouse_genomes_project 17 38787830 38803481 + MGP_129S1SvImJ_P0047726 Olfr138 protein_coding protein_coding MGP_129S1SvImJ_T0047727.1 MGP_129S1SvImJ_G0023739.1 mouse_genomes_project 17 38803112 38804051 + MGP_129S1SvImJ_P0047727 Olfr138 protein_coding protein_coding MGP_129S1SvImJ_T0099556.1 MGP_129S1SvImJ_G0037623.1 mouse_genomes_project 17 33909622 33909727 + Gm23111 snRNA snRNA MGP_129S1SvImJ_T0048670.1 MGP_129S1SvImJ_G0024065.1 mouse_genomes_project 17 83454381 83493315 - MGP_129S1SvImJ_P0048670 Cdkl4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048161.1 MGP_129S1SvImJ_G0023878.1 mouse_genomes_project 17 50823784 50934504 - MGP_129S1SvImJ_P0048161 Daam2 protein_coding protein_coding MGP_129S1SvImJ_T0048162.1 MGP_129S1SvImJ_G0023878.1 mouse_genomes_project 17 50843296 50934490 - MGP_129S1SvImJ_P0048162 Daam2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0045653.1 MGP_129S1SvImJ_G0023177.1 mouse_genomes_project 17 13388068 13410729 - MGP_129S1SvImJ_P0045653 Prdm9 protein_coding protein_coding MGP_129S1SvImJ_T0045654.1 MGP_129S1SvImJ_G0023177.1 mouse_genomes_project 17 13389349 13400987 - Prdm9 protein_coding retained_intron MGP_129S1SvImJ_T0045655.1 MGP_129S1SvImJ_G0023177.1 mouse_genomes_project 17 13389462 13400519 - Prdm9 protein_coding retained_intron MGP_129S1SvImJ_T0045656.1 MGP_129S1SvImJ_G0023177.1 mouse_genomes_project 17 13398339 13411746 - MGP_129S1SvImJ_P0045656 Prdm9 protein_coding protein_coding MGP_129S1SvImJ_T0045657.1 MGP_129S1SvImJ_G0023177.1 mouse_genomes_project 17 13405202 13411760 - Prdm9 protein_coding retained_intron MGP_129S1SvImJ_T0045658.1 MGP_129S1SvImJ_G0023177.1 mouse_genomes_project 17 13410221 13411728 - Prdm9 protein_coding processed_transcript MGP_129S1SvImJ_T0003790.1 MGP_129S1SvImJ_G0003410.1 mouse_genomes_project 17 46605425 46607679 + Gm17080 antisense antisense MGP_129S1SvImJ_T0006909.1 MGP_129S1SvImJ_G0005693.1 mouse_genomes_project 17 13064434 13073633 - Gm5091 lincRNA lincRNA MGP_129S1SvImJ_T0045993.1 MGP_129S1SvImJ_G0023313.1 mouse_genomes_project 17 23694234 23701273 - MGP_129S1SvImJ_P0045993 Syngr3 protein_coding protein_coding MGP_129S1SvImJ_T0045994.1 MGP_129S1SvImJ_G0023313.1 mouse_genomes_project 17 23695777 23697081 - Syngr3 protein_coding processed_transcript MGP_129S1SvImJ_T0006932.1 MGP_129S1SvImJ_G0005713.1 mouse_genomes_project 17 28558121 28581035 - Trp53cor1 lincRNA lincRNA MGP_129S1SvImJ_T0047695.1 MGP_129S1SvImJ_G0023715.1 mouse_genomes_project 17 37900508 37908970 + MGP_129S1SvImJ_P0047695 protein_coding protein_coding MGP_129S1SvImJ_T0047688.1 MGP_129S1SvImJ_G0023710.1 mouse_genomes_project 17 37729714 37730656 - MGP_129S1SvImJ_P0047688 Olfr103 protein_coding protein_coding MGP_129S1SvImJ_T0047689.1 MGP_129S1SvImJ_G0023710.1 mouse_genomes_project 17 37729714 37733122 - MGP_129S1SvImJ_P0047689 Olfr103 protein_coding protein_coding MGP_129S1SvImJ_T0046593.1 MGP_129S1SvImJ_G0023451.1 mouse_genomes_project 17 28321179 28355058 + MGP_129S1SvImJ_P0046593 Pnpla1 protein_coding protein_coding MGP_129S1SvImJ_T0010228.1 MGP_129S1SvImJ_G0008344.1 mouse_genomes_project 17 36125468 36125549 + Mir1894 miRNA miRNA MGP_129S1SvImJ_T0045450.1 MGP_129S1SvImJ_G0023115.1 mouse_genomes_project 17 3620514 3626852 + MGP_129S1SvImJ_P0045450 protein_coding protein_coding MGP_129S1SvImJ_T0047046.1 MGP_129S1SvImJ_G0023556.1 mouse_genomes_project 17 34066259 34069154 + MGP_129S1SvImJ_P0047046 H2-Oa protein_coding protein_coding MGP_129S1SvImJ_T0047047.1 MGP_129S1SvImJ_G0023556.1 mouse_genomes_project 17 34066341 34069153 + H2-Oa protein_coding retained_intron MGP_129S1SvImJ_T0098535.1 MGP_129S1SvImJ_G0036620.1 mouse_genomes_project 17 81693927 81694046 + n-R5s29 rRNA rRNA MGP_129S1SvImJ_T0100817.1 MGP_129S1SvImJ_G0038884.1 mouse_genomes_project 17 10593805 10593933 + Snora20 snoRNA snoRNA MGP_129S1SvImJ_T0047348.1 MGP_129S1SvImJ_G0023620.1 mouse_genomes_project 17 35262640 35266228 + MGP_129S1SvImJ_P0047348 Gpank1 protein_coding protein_coding MGP_129S1SvImJ_T0047349.1 MGP_129S1SvImJ_G0023620.1 mouse_genomes_project 17 35262818 35263501 + Gpank1 protein_coding processed_transcript MGP_129S1SvImJ_T0047350.1 MGP_129S1SvImJ_G0023620.1 mouse_genomes_project 17 35264109 35266220 + MGP_129S1SvImJ_P0047350 Gpank1 protein_coding protein_coding MGP_129S1SvImJ_T0045635.1 MGP_129S1SvImJ_G0023173.1 mouse_genomes_project 17 13232581 13270728 + MGP_129S1SvImJ_P0045635 Fam120b protein_coding protein_coding MGP_129S1SvImJ_T0010233.1 MGP_129S1SvImJ_G0008349.1 mouse_genomes_project 17 50445930 50446075 - Gm44304 miRNA miRNA MGP_129S1SvImJ_T0099567.1 MGP_129S1SvImJ_G0037634.1 mouse_genomes_project 17 52360493 52360610 - Gm25177 snRNA snRNA MGP_129S1SvImJ_T0099568.1 MGP_129S1SvImJ_G0037635.1 mouse_genomes_project 17 57283500 57283605 + Gm22654 snRNA snRNA MGP_129S1SvImJ_T0046038.1 MGP_129S1SvImJ_G0023327.1 mouse_genomes_project 17 23908095 23911823 - MGP_129S1SvImJ_P0046038 Nubp2 protein_coding protein_coding MGP_129S1SvImJ_T0047766.1 MGP_129S1SvImJ_G0023771.1 mouse_genomes_project 17 43888583 43962324 + MGP_129S1SvImJ_P0047766 Tnfrsf21 protein_coding protein_coding MGP_129S1SvImJ_T0010190.1 MGP_129S1SvImJ_G0008306.1 mouse_genomes_project 17 15836440 15836533 + Mirlet7e miRNA miRNA MGP_129S1SvImJ_T0006923.1 MGP_129S1SvImJ_G0005705.1 mouse_genomes_project 17 26065058 26109047 + Gm20468 lincRNA lincRNA MGP_129S1SvImJ_T0007005.1 MGP_129S1SvImJ_G0005763.1 mouse_genomes_project 17 91612578 91627250 - Gm26612 lincRNA lincRNA MGP_129S1SvImJ_T0047774.1 MGP_129S1SvImJ_G0023776.1 mouse_genomes_project 17 44461637 44498502 + MGP_129S1SvImJ_P0047774 Pla2g7 protein_coding protein_coding MGP_129S1SvImJ_T0047775.1 MGP_129S1SvImJ_G0023776.1 mouse_genomes_project 17 44461808 44511119 + MGP_129S1SvImJ_P0047775 Pla2g7 protein_coding protein_coding MGP_129S1SvImJ_T0047776.1 MGP_129S1SvImJ_G0023776.1 mouse_genomes_project 17 44462014 44492715 + MGP_129S1SvImJ_P0047776 Pla2g7 protein_coding protein_coding MGP_129S1SvImJ_T0047777.1 MGP_129S1SvImJ_G0023776.1 mouse_genomes_project 17 44462174 44487597 + Pla2g7 protein_coding processed_transcript MGP_129S1SvImJ_T0047778.1 MGP_129S1SvImJ_G0023776.1 mouse_genomes_project 17 44462212 44506195 + MGP_129S1SvImJ_P0047778 Pla2g7 protein_coding protein_coding MGP_129S1SvImJ_T0047779.1 MGP_129S1SvImJ_G0023776.1 mouse_genomes_project 17 44462254 44506570 + Pla2g7 protein_coding retained_intron MGP_129S1SvImJ_T0046722.1 MGP_129S1SvImJ_G0023486.1 mouse_genomes_project 17 31000095 31032844 - MGP_129S1SvImJ_P0046722 Rsph1 protein_coding protein_coding MGP_129S1SvImJ_T0048351.1 MGP_129S1SvImJ_G0023958.1 mouse_genomes_project 17 58954906 58959604 - MGP_129S1SvImJ_P0048351 Tnfsf14 protein_coding protein_coding MGP_129S1SvImJ_T0013291.1 MGP_129S1SvImJ_G0011380.1 mouse_genomes_project 17 55533632 55535789 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0001021.1 MGP_129S1SvImJ_G0000950.1 mouse_genomes_project 17 73838225 73839857 - TEC TEC MGP_129S1SvImJ_T0102365.1 MGP_129S1SvImJ_G0040199.1 mouse_genomes_project 17 38518955 38521789 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0010195.1 MGP_129S1SvImJ_G0008311.1 mouse_genomes_project 17 23197969 23198047 - Mir5134 miRNA miRNA MGP_129S1SvImJ_T0048260.1 MGP_129S1SvImJ_G0023922.1 mouse_genomes_project 17 57957713 57972913 - MGP_129S1SvImJ_P0048260 Plin3 protein_coding protein_coding MGP_129S1SvImJ_T0099560.1 MGP_129S1SvImJ_G0037627.1 mouse_genomes_project 17 37645027 37645190 - Gm25104 snRNA snRNA MGP_129S1SvImJ_T0048370.1 MGP_129S1SvImJ_G0023967.1 mouse_genomes_project 17 60665467 60670974 - Pdzph1 protein_coding retained_intron MGP_129S1SvImJ_T0048371.1 MGP_129S1SvImJ_G0023967.1 mouse_genomes_project 17 60665467 60789152 - MGP_129S1SvImJ_P0048371 Pdzph1 protein_coding protein_coding MGP_129S1SvImJ_T0048372.1 MGP_129S1SvImJ_G0023967.1 mouse_genomes_project 17 60665629 60686282 - MGP_129S1SvImJ_P0048372 Pdzph1 protein_coding protein_coding MGP_129S1SvImJ_T0045470.1 MGP_129S1SvImJ_G0023125.1 mouse_genomes_project 17 5477570 5555021 - MGP_129S1SvImJ_P0045470 protein_coding protein_coding MGP_129S1SvImJ_T0046773.1 MGP_129S1SvImJ_G0023495.1 mouse_genomes_project 17 31646498 31661166 - MGP_129S1SvImJ_P0046773 Sik1 protein_coding protein_coding MGP_129S1SvImJ_T0010247.1 MGP_129S1SvImJ_G0008363.1 mouse_genomes_project 17 95507393 95507528 + Gm44345 miRNA miRNA MGP_129S1SvImJ_T0003760.1 MGP_129S1SvImJ_G0003388.1 mouse_genomes_project 17 30892466 30902027 + Gm15318 antisense antisense MGP_129S1SvImJ_T0003761.1 MGP_129S1SvImJ_G0003388.1 mouse_genomes_project 17 30892466 30901192 + Gm15318 antisense antisense MGP_129S1SvImJ_T0003762.1 MGP_129S1SvImJ_G0003388.1 mouse_genomes_project 17 30892466 30902756 + Gm15318 antisense antisense MGP_129S1SvImJ_T0047327.1 MGP_129S1SvImJ_G0023615.1 mouse_genomes_project 17 35221785 35226914 - MGP_129S1SvImJ_P0047327 Ly6g6f protein_coding protein_coding MGP_129S1SvImJ_T0047828.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46604505 46620209 - MGP_129S1SvImJ_P0047828 Slc29a1 protein_coding protein_coding MGP_129S1SvImJ_T0047829.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46604505 46611876 - MGP_129S1SvImJ_P0047829 Slc29a1 protein_coding protein_coding MGP_129S1SvImJ_T0047830.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46604507 46612942 - MGP_129S1SvImJ_P0047830 Slc29a1 protein_coding protein_coding MGP_129S1SvImJ_T0047831.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46604508 46614872 - MGP_129S1SvImJ_P0047831 Slc29a1 protein_coding protein_coding MGP_129S1SvImJ_T0047832.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46604508 46615205 - MGP_129S1SvImJ_P0047832 Slc29a1 protein_coding protein_coding MGP_129S1SvImJ_T0047833.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46604508 46614874 - MGP_129S1SvImJ_P0047833 Slc29a1 protein_coding protein_coding MGP_129S1SvImJ_T0047834.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46604847 46611798 - MGP_129S1SvImJ_P0047834 Slc29a1 protein_coding protein_coding MGP_129S1SvImJ_T0047835.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46604976 46611564 - MGP_129S1SvImJ_P0047835 Slc29a1 protein_coding protein_coding MGP_129S1SvImJ_T0047836.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46605523 46608043 - Slc29a1 protein_coding processed_transcript MGP_129S1SvImJ_T0047837.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46607667 46614804 - MGP_129S1SvImJ_P0047837 Slc29a1 protein_coding protein_coding MGP_129S1SvImJ_T0047838.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46607668 46614904 - MGP_129S1SvImJ_P0047838 Slc29a1 protein_coding protein_coding MGP_129S1SvImJ_T0047839.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46607821 46612141 - Slc29a1 protein_coding retained_intron MGP_129S1SvImJ_T0047840.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46608169 46609413 - Slc29a1 protein_coding retained_intron MGP_129S1SvImJ_T0047841.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46608508 46614853 - Slc29a1 protein_coding retained_intron MGP_129S1SvImJ_T0047842.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46608718 46614817 - Slc29a1 protein_coding retained_intron MGP_129S1SvImJ_T0047843.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46608718 46620210 - MGP_129S1SvImJ_P0047843 Slc29a1 protein_coding protein_coding MGP_129S1SvImJ_T0047844.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46608818 46615154 - MGP_129S1SvImJ_P0047844 Slc29a1 protein_coding protein_coding MGP_129S1SvImJ_T0047845.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46608824 46612936 - MGP_129S1SvImJ_P0047845 Slc29a1 protein_coding protein_coding MGP_129S1SvImJ_T0047846.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46608998 46620212 - MGP_129S1SvImJ_P0047846 Slc29a1 protein_coding protein_coding MGP_129S1SvImJ_T0047847.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46609023 46614858 - MGP_129S1SvImJ_P0047847 Slc29a1 protein_coding protein_coding MGP_129S1SvImJ_T0047848.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46609073 46614804 - MGP_129S1SvImJ_P0047848 Slc29a1 protein_coding protein_coding MGP_129S1SvImJ_T0047849.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46609258 46614843 - MGP_129S1SvImJ_P0047849 Slc29a1 protein_coding protein_coding MGP_129S1SvImJ_T0047850.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46609324 46614845 - MGP_129S1SvImJ_P0047850 Slc29a1 protein_coding protein_coding MGP_129S1SvImJ_T0047851.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46609370 46615259 - MGP_129S1SvImJ_P0047851 Slc29a1 protein_coding protein_coding MGP_129S1SvImJ_T0047852.1 MGP_129S1SvImJ_G0023794.1 mouse_genomes_project 17 46609413 46616364 - MGP_129S1SvImJ_P0047852 Slc29a1 protein_coding protein_coding MGP_129S1SvImJ_T0047599.1 MGP_129S1SvImJ_G0023676.1 mouse_genomes_project 17 36823391 36826809 - MGP_129S1SvImJ_P0047599 H2-M10.4 protein_coding protein_coding MGP_129S1SvImJ_T0047956.1 MGP_129S1SvImJ_G0023818.1 mouse_genomes_project 17 47549992 47552820 + MGP_129S1SvImJ_P0047956 Dnph1 protein_coding protein_coding MGP_129S1SvImJ_T0048206.1 MGP_129S1SvImJ_G0023891.1 mouse_genomes_project 17 55387074 55403671 - MGP_129S1SvImJ_P0048206 Sult1c2 protein_coding protein_coding MGP_129S1SvImJ_T0047583.1 MGP_129S1SvImJ_G0023671.1 mouse_genomes_project 17 36601127 36602319 - MGP_129S1SvImJ_P0047583 protein_coding protein_coding MGP_129S1SvImJ_T0048598.1 MGP_129S1SvImJ_G0024033.1 mouse_genomes_project 17 77690010 78110346 + MGP_129S1SvImJ_P0048598 Ltbp1 protein_coding protein_coding MGP_129S1SvImJ_T0048599.1 MGP_129S1SvImJ_G0024033.1 mouse_genomes_project 17 77690736 77695370 + Ltbp1 protein_coding processed_transcript MGP_129S1SvImJ_T0048600.1 MGP_129S1SvImJ_G0024033.1 mouse_genomes_project 17 77883026 78063227 + MGP_129S1SvImJ_P0048600 Ltbp1 protein_coding protein_coding MGP_129S1SvImJ_T0048601.1 MGP_129S1SvImJ_G0024033.1 mouse_genomes_project 17 77883026 78109916 + MGP_129S1SvImJ_P0048601 Ltbp1 protein_coding protein_coding MGP_129S1SvImJ_T0048602.1 MGP_129S1SvImJ_G0024033.1 mouse_genomes_project 17 77883127 78109905 + MGP_129S1SvImJ_P0048602 Ltbp1 protein_coding protein_coding MGP_129S1SvImJ_T0048603.1 MGP_129S1SvImJ_G0024033.1 mouse_genomes_project 17 78002463 78006841 + Ltbp1 protein_coding retained_intron MGP_129S1SvImJ_T0048604.1 MGP_129S1SvImJ_G0024033.1 mouse_genomes_project 17 78102795 78111091 + Ltbp1 protein_coding retained_intron MGP_129S1SvImJ_T0102297.1 MGP_129S1SvImJ_G0040131.1 mouse_genomes_project 17 19677279 19677703 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0011456.1 MGP_129S1SvImJ_G0009572.1 mouse_genomes_project 17 83103479 83103726 - Gm25706 misc_RNA misc_RNA MGP_129S1SvImJ_T0047313.1 MGP_129S1SvImJ_G0023611.1 mouse_genomes_project 17 35202503 35207511 - MGP_129S1SvImJ_P0047313 G6b protein_coding protein_coding MGP_129S1SvImJ_T0047314.1 MGP_129S1SvImJ_G0023611.1 mouse_genomes_project 17 35204142 35207497 - MGP_129S1SvImJ_P0047314 G6b protein_coding protein_coding MGP_129S1SvImJ_T0046871.1 MGP_129S1SvImJ_G0023524.1 mouse_genomes_project 17 33135170 33150507 - MGP_129S1SvImJ_P0046871 Zfp955b protein_coding protein_coding MGP_129S1SvImJ_T0047679.1 MGP_129S1SvImJ_G0023701.1 mouse_genomes_project 17 37571718 37573023 - MGP_129S1SvImJ_P0047679 Olfr94 protein_coding protein_coding MGP_129S1SvImJ_T0046307.1 MGP_129S1SvImJ_G0023384.1 mouse_genomes_project 17 25059144 25068717 - MGP_129S1SvImJ_P0046307 A930017K11Rik protein_coding protein_coding MGP_129S1SvImJ_T0102317.1 MGP_129S1SvImJ_G0040151.1 mouse_genomes_project 17 34352696 34354415 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0006951.1 MGP_129S1SvImJ_G0005728.1 mouse_genomes_project 17 35925597 35927673 - Gm20443 lincRNA lincRNA MGP_129S1SvImJ_T0046865.1 MGP_129S1SvImJ_G0023521.1 mouse_genomes_project 17 32985292 33003258 + MGP_129S1SvImJ_P0046865 Zfp563 protein_coding protein_coding MGP_129S1SvImJ_T0046866.1 MGP_129S1SvImJ_G0023521.1 mouse_genomes_project 17 32985546 33001779 + MGP_129S1SvImJ_P0046866 Zfp563 protein_coding protein_coding MGP_129S1SvImJ_T0046867.1 MGP_129S1SvImJ_G0023521.1 mouse_genomes_project 17 32988440 33002113 + MGP_129S1SvImJ_P0046867 Zfp563 protein_coding protein_coding MGP_129S1SvImJ_T0101876.1 MGP_129S1SvImJ_G0039807.1 mouse_genomes_project 17 73986550 74017462 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101877.1 MGP_129S1SvImJ_G0039807.1 mouse_genomes_project 17 73988721 74006407 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0046690.1 MGP_129S1SvImJ_G0023473.1 mouse_genomes_project 17 29394528 29458527 - MGP_129S1SvImJ_P0046690 Mdga1 protein_coding protein_coding MGP_129S1SvImJ_T0046691.1 MGP_129S1SvImJ_G0023473.1 mouse_genomes_project 17 29394530 29457779 - MGP_129S1SvImJ_P0046691 Mdga1 protein_coding protein_coding MGP_129S1SvImJ_T0046692.1 MGP_129S1SvImJ_G0023473.1 mouse_genomes_project 17 29398620 29411274 - Mdga1 protein_coding retained_intron MGP_129S1SvImJ_T0046693.1 MGP_129S1SvImJ_G0023473.1 mouse_genomes_project 17 29398830 29404421 - Mdga1 protein_coding processed_transcript MGP_129S1SvImJ_T0046694.1 MGP_129S1SvImJ_G0023473.1 mouse_genomes_project 17 29398847 29408984 - MGP_129S1SvImJ_P0046694 Mdga1 protein_coding protein_coding MGP_129S1SvImJ_T0046695.1 MGP_129S1SvImJ_G0023473.1 mouse_genomes_project 17 29410971 29550724 - MGP_129S1SvImJ_P0046695 Mdga1 protein_coding protein_coding MGP_129S1SvImJ_T0046696.1 MGP_129S1SvImJ_G0023473.1 mouse_genomes_project 17 29418525 29457379 - MGP_129S1SvImJ_P0046696 Mdga1 protein_coding protein_coding MGP_129S1SvImJ_T0046697.1 MGP_129S1SvImJ_G0023473.1 mouse_genomes_project 17 29419406 29459799 - Mdga1 protein_coding processed_transcript MGP_129S1SvImJ_T0048566.1 MGP_129S1SvImJ_G0024026.1 mouse_genomes_project 17 76920267 76935021 - MGP_129S1SvImJ_P0048566 Dpy30 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0003781.1 MGP_129S1SvImJ_G0003404.1 mouse_genomes_project 17 36342594 36356073 + antisense antisense MGP_129S1SvImJ_T0047439.1 MGP_129S1SvImJ_G0023648.1 mouse_genomes_project 17 35819514 35827438 - MGP_129S1SvImJ_P0047439 Dpcr1 protein_coding protein_coding MGP_129S1SvImJ_T0045730.1 MGP_129S1SvImJ_G0023223.1 mouse_genomes_project 17 19965701 19966691 + MGP_129S1SvImJ_P0045730 Vmn1r234 protein_coding protein_coding MGP_129S1SvImJ_T0046857.1 MGP_129S1SvImJ_G0023517.1 mouse_genomes_project 17 32858232 32870058 + MGP_129S1SvImJ_P0046857 Zfp472 protein_coding protein_coding MGP_129S1SvImJ_T0045702.1 MGP_129S1SvImJ_G0023201.1 mouse_genomes_project 17 18111323 18154550 + MGP_129S1SvImJ_P0045702 protein_coding protein_coding MGP_129S1SvImJ_T0047641.1 MGP_129S1SvImJ_G0023692.1 mouse_genomes_project 17 37344964 37350190 - H2-M5 protein_coding retained_intron MGP_129S1SvImJ_T0047642.1 MGP_129S1SvImJ_G0023692.1 mouse_genomes_project 17 37345986 37349827 - MGP_129S1SvImJ_P0047642 H2-M5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0047643.1 MGP_129S1SvImJ_G0023692.1 mouse_genomes_project 17 37345986 37349617 - MGP_129S1SvImJ_P0047643 H2-M5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0047644.1 MGP_129S1SvImJ_G0023692.1 mouse_genomes_project 17 37347509 37350157 - MGP_129S1SvImJ_P0047644 H2-M5 protein_coding protein_coding MGP_129S1SvImJ_T0047645.1 MGP_129S1SvImJ_G0023692.1 mouse_genomes_project 17 37347769 37349843 - MGP_129S1SvImJ_P0047645 H2-M5 protein_coding protein_coding MGP_129S1SvImJ_T0047646.1 MGP_129S1SvImJ_G0023692.1 mouse_genomes_project 17 37347769 37349843 - MGP_129S1SvImJ_P0047646 H2-M5 protein_coding protein_coding MGP_129S1SvImJ_T0047647.1 MGP_129S1SvImJ_G0023692.1 mouse_genomes_project 17 37348151 37349700 - MGP_129S1SvImJ_P0047647 H2-M5 protein_coding protein_coding MGP_129S1SvImJ_T0048071.1 MGP_129S1SvImJ_G0023857.1 mouse_genomes_project 17 48954106 49017436 + MGP_129S1SvImJ_P0048071 Tfeb protein_coding protein_coding MGP_129S1SvImJ_T0048072.1 MGP_129S1SvImJ_G0023857.1 mouse_genomes_project 17 48954676 49011101 + MGP_129S1SvImJ_P0048072 Tfeb protein_coding protein_coding MGP_129S1SvImJ_T0048073.1 MGP_129S1SvImJ_G0023857.1 mouse_genomes_project 17 48955004 49017432 + MGP_129S1SvImJ_P0048073 Tfeb protein_coding protein_coding MGP_129S1SvImJ_T0048074.1 MGP_129S1SvImJ_G0023857.1 mouse_genomes_project 17 48955979 49014087 + MGP_129S1SvImJ_P0048074 Tfeb protein_coding protein_coding MGP_129S1SvImJ_T0048075.1 MGP_129S1SvImJ_G0023857.1 mouse_genomes_project 17 48975795 49011101 + MGP_129S1SvImJ_P0048075 Tfeb protein_coding protein_coding MGP_129S1SvImJ_T0048076.1 MGP_129S1SvImJ_G0023857.1 mouse_genomes_project 17 48980616 49011213 + MGP_129S1SvImJ_P0048076 Tfeb protein_coding protein_coding MGP_129S1SvImJ_T0048077.1 MGP_129S1SvImJ_G0023857.1 mouse_genomes_project 17 48984611 49011314 + MGP_129S1SvImJ_P0048077 Tfeb protein_coding protein_coding MGP_129S1SvImJ_T0048078.1 MGP_129S1SvImJ_G0023857.1 mouse_genomes_project 17 48992401 49011318 + MGP_129S1SvImJ_P0048078 Tfeb protein_coding protein_coding MGP_129S1SvImJ_T0048079.1 MGP_129S1SvImJ_G0023857.1 mouse_genomes_project 17 48992401 49011316 + MGP_129S1SvImJ_P0048079 Tfeb protein_coding protein_coding MGP_129S1SvImJ_T0048080.1 MGP_129S1SvImJ_G0023857.1 mouse_genomes_project 17 49007956 49011394 + MGP_129S1SvImJ_P0048080 Tfeb protein_coding protein_coding MGP_129S1SvImJ_T0048081.1 MGP_129S1SvImJ_G0023857.1 mouse_genomes_project 17 49010736 49017432 + MGP_129S1SvImJ_P0048081 Tfeb protein_coding protein_coding MGP_129S1SvImJ_T0048082.1 MGP_129S1SvImJ_G0023857.1 mouse_genomes_project 17 49011171 49017433 + MGP_129S1SvImJ_P0048082 Tfeb protein_coding protein_coding MGP_129S1SvImJ_T0048083.1 MGP_129S1SvImJ_G0023857.1 mouse_genomes_project 17 49012584 49014733 + Tfeb protein_coding processed_transcript MGP_129S1SvImJ_T0048084.1 MGP_129S1SvImJ_G0023857.1 mouse_genomes_project 17 49012926 49013955 + Tfeb protein_coding retained_intron MGP_129S1SvImJ_T0048085.1 MGP_129S1SvImJ_G0023857.1 mouse_genomes_project 17 49014457 49016630 + Tfeb protein_coding retained_intron MGP_129S1SvImJ_T0047687.1 MGP_129S1SvImJ_G0023709.1 mouse_genomes_project 17 37676051 37677149 - MGP_129S1SvImJ_P0047687 protein_coding protein_coding MGP_129S1SvImJ_T0045988.1 MGP_129S1SvImJ_G0023309.1 mouse_genomes_project 17 23628161 23634302 + MGP_129S1SvImJ_P0045988 Nthl1 protein_coding protein_coding MGP_129S1SvImJ_T0102369.1 MGP_129S1SvImJ_G0040203.1 mouse_genomes_project 17 57458611 57459259 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0046536.1 MGP_129S1SvImJ_G0023439.1 mouse_genomes_project 17 27720309 27740911 - MGP_129S1SvImJ_P0046536 Tead3 protein_coding protein_coding MGP_129S1SvImJ_T0046537.1 MGP_129S1SvImJ_G0023439.1 mouse_genomes_project 17 27720352 27740974 - Tead3 protein_coding retained_intron MGP_129S1SvImJ_T0046538.1 MGP_129S1SvImJ_G0023439.1 mouse_genomes_project 17 27723073 27733722 - MGP_129S1SvImJ_P0046538 Tead3 protein_coding protein_coding MGP_129S1SvImJ_T0046539.1 MGP_129S1SvImJ_G0023439.1 mouse_genomes_project 17 27723859 27725743 - Tead3 protein_coding retained_intron MGP_129S1SvImJ_T0046540.1 MGP_129S1SvImJ_G0023439.1 mouse_genomes_project 17 27724276 27726672 - Tead3 protein_coding processed_transcript MGP_129S1SvImJ_T0047010.1 MGP_129S1SvImJ_G0023550.1 mouse_genomes_project 17 33955467 33959180 - MGP_129S1SvImJ_P0047010 H2-Q4 protein_coding protein_coding MGP_129S1SvImJ_T0048445.1 MGP_129S1SvImJ_G0023989.1 mouse_genomes_project 17 68780985 68822348 - MGP_129S1SvImJ_P0048445 Themis3 protein_coding protein_coding MGP_129S1SvImJ_T0011441.1 MGP_129S1SvImJ_G0009557.1 mouse_genomes_project 17 27847735 27848023 + Gm22146 misc_RNA misc_RNA MGP_129S1SvImJ_T0017576.1 MGP_129S1SvImJ_G0015338.1 mouse_genomes_project 17 12890653 12904572 + Gm28869 processed_transcript processed_transcript MGP_129S1SvImJ_T0003809.1 MGP_129S1SvImJ_G0003425.1 mouse_genomes_project 17 89599426 89601441 - 2010106C02Rik antisense antisense MGP_129S1SvImJ_T0045701.1 MGP_129S1SvImJ_G0023200.1 mouse_genomes_project 17 18005841 18046306 + MGP_129S1SvImJ_P0045701 Vmn2r101 protein_coding protein_coding MGP_129S1SvImJ_T0048729.1 MGP_129S1SvImJ_G0024090.1 mouse_genomes_project 17 89281183 89449256 - MGP_129S1SvImJ_P0048729 Srbd1 protein_coding protein_coding MGP_129S1SvImJ_T0003797.1 MGP_129S1SvImJ_G0003415.1 mouse_genomes_project 17 51284962 51286206 - Gm16554 antisense antisense MGP_129S1SvImJ_T0047685.1 MGP_129S1SvImJ_G0023707.1 mouse_genomes_project 17 37657390 37658003 - MGP_129S1SvImJ_P0047685 Olfr99 protein_coding protein_coding MGP_129S1SvImJ_T0047717.1 MGP_129S1SvImJ_G0023734.1 mouse_genomes_project 17 38600980 38608843 - MGP_129S1SvImJ_P0047717 Olfr131 protein_coding protein_coding MGP_129S1SvImJ_T0047718.1 MGP_129S1SvImJ_G0023734.1 mouse_genomes_project 17 38600980 38602010 - MGP_129S1SvImJ_P0047718 Olfr131 protein_coding protein_coding MGP_129S1SvImJ_T0045411.1 MGP_129S1SvImJ_G0023105.1 mouse_genomes_project 17 2517989 2519434 - MGP_129S1SvImJ_P0045411 Ldhal6b protein_coding protein_coding MGP_129S1SvImJ_T0047604.1 MGP_129S1SvImJ_G0023680.1 mouse_genomes_project 17 37119526 37123236 + MGP_129S1SvImJ_P0047604 H2-M10.5 protein_coding protein_coding MGP_129S1SvImJ_T0046560.1 MGP_129S1SvImJ_G0023443.1 mouse_genomes_project 17 27973132 27977440 + MGP_129S1SvImJ_P0046560 Clpsl2 protein_coding protein_coding MGP_129S1SvImJ_T0045669.1 MGP_129S1SvImJ_G0023182.1 mouse_genomes_project 17 15518468 15611897 - MGP_129S1SvImJ_P0045669 Lnpep protein_coding protein_coding MGP_129S1SvImJ_T0047256.1 MGP_129S1SvImJ_G0023598.1 mouse_genomes_project 17 35037932 35053847 + Slc44a4 protein_coding retained_intron MGP_129S1SvImJ_T0047257.1 MGP_129S1SvImJ_G0023598.1 mouse_genomes_project 17 35037936 35053824 + MGP_129S1SvImJ_P0047257 Slc44a4 protein_coding protein_coding MGP_129S1SvImJ_T0047258.1 MGP_129S1SvImJ_G0023598.1 mouse_genomes_project 17 35041185 35053904 + MGP_129S1SvImJ_P0047258 Slc44a4 protein_coding protein_coding MGP_129S1SvImJ_T0048781.1 MGP_129S1SvImJ_G0024108.1 mouse_genomes_project 17 91443224 91470479 - MGP_129S1SvImJ_P0048781 Fbxo11 protein_coding protein_coding MGP_129S1SvImJ_T0048782.1 MGP_129S1SvImJ_G0024108.1 mouse_genomes_project 17 91443224 91524166 - MGP_129S1SvImJ_P0048782 Fbxo11 protein_coding protein_coding MGP_129S1SvImJ_T0048783.1 MGP_129S1SvImJ_G0024108.1 mouse_genomes_project 17 91443272 91524127 - MGP_129S1SvImJ_P0048783 Fbxo11 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048784.1 MGP_129S1SvImJ_G0024108.1 mouse_genomes_project 17 91443783 91463528 - MGP_129S1SvImJ_P0048784 Fbxo11 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048785.1 MGP_129S1SvImJ_G0024108.1 mouse_genomes_project 17 91445577 91453348 - Fbxo11 protein_coding retained_intron MGP_129S1SvImJ_T0102325.1 MGP_129S1SvImJ_G0040159.1 mouse_genomes_project 17 34863951 34905440 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0048119.1 MGP_129S1SvImJ_G0023869.1 mouse_genomes_project 17 49625839 49631734 + MGP_129S1SvImJ_P0048119 Trem2 protein_coding protein_coding MGP_129S1SvImJ_T0048120.1 MGP_129S1SvImJ_G0023869.1 mouse_genomes_project 17 49625878 49633529 + Trem2 protein_coding retained_intron MGP_129S1SvImJ_T0048121.1 MGP_129S1SvImJ_G0023869.1 mouse_genomes_project 17 49625926 49631734 + MGP_129S1SvImJ_P0048121 Trem2 protein_coding protein_coding MGP_129S1SvImJ_T0048122.1 MGP_129S1SvImJ_G0023869.1 mouse_genomes_project 17 49625927 49630020 + Trem2 protein_coding processed_transcript MGP_129S1SvImJ_T0099547.1 MGP_129S1SvImJ_G0037614.1 mouse_genomes_project 17 12623535 12623599 - Gm23352 snRNA snRNA MGP_129S1SvImJ_T0046482.1 MGP_129S1SvImJ_G0023430.1 mouse_genomes_project 17 27240348 27251082 - MGP_129S1SvImJ_P0046482 Taf11 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0046483.1 MGP_129S1SvImJ_G0023430.1 mouse_genomes_project 17 27240886 27242499 - Taf11 protein_coding processed_transcript MGP_129S1SvImJ_T0099549.1 MGP_129S1SvImJ_G0037616.1 mouse_genomes_project 17 23342360 23342467 - Gm25618 snRNA snRNA MGP_129S1SvImJ_T0017604.1 MGP_129S1SvImJ_G0015351.1 mouse_genomes_project 17 35073635 35074642 - 1110038B12Rik processed_transcript retained_intron MGP_129S1SvImJ_T0017605.1 MGP_129S1SvImJ_G0015351.1 mouse_genomes_project 17 35073638 35075846 - 1110038B12Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017606.1 MGP_129S1SvImJ_G0015351.1 mouse_genomes_project 17 35073638 35075869 - 1110038B12Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017607.1 MGP_129S1SvImJ_G0015351.1 mouse_genomes_project 17 35073638 35075854 - 1110038B12Rik processed_transcript retained_intron MGP_129S1SvImJ_T0017608.1 MGP_129S1SvImJ_G0015351.1 mouse_genomes_project 17 35073639 35075832 - 1110038B12Rik processed_transcript retained_intron MGP_129S1SvImJ_T0017609.1 MGP_129S1SvImJ_G0015351.1 mouse_genomes_project 17 35073640 35075866 - 1110038B12Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017610.1 MGP_129S1SvImJ_G0015351.1 mouse_genomes_project 17 35074843 35075866 - 1110038B12Rik processed_transcript retained_intron MGP_129S1SvImJ_T0017611.1 MGP_129S1SvImJ_G0015351.1 mouse_genomes_project 17 35074991 35075860 - 1110038B12Rik processed_transcript retained_intron MGP_129S1SvImJ_T0048669.1 MGP_129S1SvImJ_G0024064.1 mouse_genomes_project 17 83312630 83406925 - MGP_129S1SvImJ_P0048669 Sos1 protein_coding protein_coding MGP_129S1SvImJ_T0011833.1 MGP_129S1SvImJ_G0009939.1 mouse_genomes_project 17 35555711 35634629 + polymorphic_pseudogene retained_intron MGP_129S1SvImJ_T0047945.1 MGP_129S1SvImJ_G0023814.1 mouse_genomes_project 17 47480056 47482894 + MGP_129S1SvImJ_P0047945 Crip3 protein_coding protein_coding MGP_129S1SvImJ_T0047946.1 MGP_129S1SvImJ_G0023814.1 mouse_genomes_project 17 47480072 47482695 + Crip3 protein_coding retained_intron MGP_129S1SvImJ_T0047947.1 MGP_129S1SvImJ_G0023814.1 mouse_genomes_project 17 47480072 47482889 + MGP_129S1SvImJ_P0047947 Crip3 protein_coding protein_coding MGP_129S1SvImJ_T0047948.1 MGP_129S1SvImJ_G0023814.1 mouse_genomes_project 17 47480081 47482533 + MGP_129S1SvImJ_P0047948 Crip3 protein_coding protein_coding MGP_129S1SvImJ_T0047949.1 MGP_129S1SvImJ_G0023814.1 mouse_genomes_project 17 47480100 47481603 + Crip3 protein_coding processed_transcript MGP_129S1SvImJ_T0047950.1 MGP_129S1SvImJ_G0023814.1 mouse_genomes_project 17 47481792 47482840 + Crip3 protein_coding retained_intron MGP_129S1SvImJ_T0047951.1 MGP_129S1SvImJ_G0023814.1 mouse_genomes_project 17 47482082 47482815 + Crip3 protein_coding retained_intron MGP_129S1SvImJ_T0010197.1 MGP_129S1SvImJ_G0008313.1 mouse_genomes_project 17 23591860 23591954 + Gm24589 miRNA miRNA MGP_129S1SvImJ_T0045763.1 MGP_129S1SvImJ_G0023243.1 mouse_genomes_project 17 20781452 20782244 - MGP_129S1SvImJ_P0045763 Gm9772 protein_coding protein_coding MGP_129S1SvImJ_T0099581.1 MGP_129S1SvImJ_G0037648.1 mouse_genomes_project 17 90036639 90036749 - Gm22235 snRNA snRNA MGP_129S1SvImJ_T0048397.1 MGP_129S1SvImJ_G0023978.1 mouse_genomes_project 17 67769206 67773821 - MGP_129S1SvImJ_P0048397 Txndc2 protein_coding protein_coding MGP_129S1SvImJ_T0013317.1 MGP_129S1SvImJ_G0011406.1 mouse_genomes_project 17 88849878 88850218 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102339.1 MGP_129S1SvImJ_G0040173.1 mouse_genomes_project 17 36591004 36591110 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0046443.1 MGP_129S1SvImJ_G0023422.1 mouse_genomes_project 17 26875928 26880338 - MGP_129S1SvImJ_P0046443 AI413582 protein_coding protein_coding MGP_129S1SvImJ_T0046444.1 MGP_129S1SvImJ_G0023422.1 mouse_genomes_project 17 26876124 26880314 - MGP_129S1SvImJ_P0046444 AI413582 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046445.1 MGP_129S1SvImJ_G0023422.1 mouse_genomes_project 17 26876126 26880355 - AI413582 protein_coding retained_intron MGP_129S1SvImJ_T0046446.1 MGP_129S1SvImJ_G0023422.1 mouse_genomes_project 17 26879287 26880273 - AI413582 protein_coding processed_transcript MGP_129S1SvImJ_T0048703.1 MGP_129S1SvImJ_G0024079.1 mouse_genomes_project 17 87679622 87795779 + MGP_129S1SvImJ_P0048703 Plekhh2 protein_coding protein_coding MGP_129S1SvImJ_T0046553.1 MGP_129S1SvImJ_G0023441.1 mouse_genomes_project 17 27796304 27893384 - MGP_129S1SvImJ_P0046553 Fkbp5 protein_coding protein_coding MGP_129S1SvImJ_T0046554.1 MGP_129S1SvImJ_G0023441.1 mouse_genomes_project 17 27796306 27927738 - MGP_129S1SvImJ_P0046554 Fkbp5 protein_coding protein_coding MGP_129S1SvImJ_T0046555.1 MGP_129S1SvImJ_G0023441.1 mouse_genomes_project 17 27796314 27895239 - MGP_129S1SvImJ_P0046555 Fkbp5 protein_coding protein_coding MGP_129S1SvImJ_T0046556.1 MGP_129S1SvImJ_G0023441.1 mouse_genomes_project 17 27802749 27829494 - Fkbp5 protein_coding processed_transcript MGP_129S1SvImJ_T0046557.1 MGP_129S1SvImJ_G0023441.1 mouse_genomes_project 17 27816828 27842595 - MGP_129S1SvImJ_P0046557 Fkbp5 protein_coding protein_coding MGP_129S1SvImJ_T0046558.1 MGP_129S1SvImJ_G0023441.1 mouse_genomes_project 17 27904477 27914518 - Fkbp5 protein_coding retained_intron MGP_129S1SvImJ_T0101649.1 MGP_129S1SvImJ_G0039680.1 mouse_genomes_project 17 27422788 27424944 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0046707.1 MGP_129S1SvImJ_G0023479.1 mouse_genomes_project 17 30670420 30733337 + MGP_129S1SvImJ_P0046707 Umodl1 protein_coding protein_coding MGP_129S1SvImJ_T0046708.1 MGP_129S1SvImJ_G0023479.1 mouse_genomes_project 17 30670420 30733337 + MGP_129S1SvImJ_P0046708 Umodl1 protein_coding protein_coding MGP_129S1SvImJ_T0046709.1 MGP_129S1SvImJ_G0023479.1 mouse_genomes_project 17 30670424 30733337 + MGP_129S1SvImJ_P0046709 Umodl1 protein_coding protein_coding MGP_129S1SvImJ_T0006994.1 MGP_129S1SvImJ_G0005755.1 mouse_genomes_project 17 82211128 82214456 + Gm17315 lincRNA lincRNA MGP_129S1SvImJ_T0013284.1 MGP_129S1SvImJ_G0011373.1 mouse_genomes_project 17 55173357 55173840 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017578.1 MGP_129S1SvImJ_G0015340.1 mouse_genomes_project 17 23166929 23179613 + BC028777 processed_transcript processed_transcript MGP_129S1SvImJ_T0017579.1 MGP_129S1SvImJ_G0015340.1 mouse_genomes_project 17 23170574 23179798 + BC028777 processed_transcript processed_transcript MGP_129S1SvImJ_T0045610.1 MGP_129S1SvImJ_G0023164.1 mouse_genomes_project 17 12098879 12227940 + MGP_129S1SvImJ_P0045610 Smoc2 protein_coding protein_coding MGP_129S1SvImJ_T0001013.1 MGP_129S1SvImJ_G0000942.1 mouse_genomes_project 17 53271857 53273828 - TEC TEC MGP_129S1SvImJ_T0045747.1 MGP_129S1SvImJ_G0023237.1 mouse_genomes_project 17 20477252 20493290 + MGP_129S1SvImJ_P0045747 Zfp229 protein_coding protein_coding MGP_129S1SvImJ_T0045748.1 MGP_129S1SvImJ_G0023237.1 mouse_genomes_project 17 20480044 20482446 + Zfp229 protein_coding processed_transcript MGP_129S1SvImJ_T0045749.1 MGP_129S1SvImJ_G0023237.1 mouse_genomes_project 17 20480077 20481282 + Zfp229 protein_coding processed_transcript MGP_129S1SvImJ_T0045750.1 MGP_129S1SvImJ_G0023237.1 mouse_genomes_project 17 20480088 20497197 + MGP_129S1SvImJ_P0045750 Zfp229 protein_coding protein_coding MGP_129S1SvImJ_T0045751.1 MGP_129S1SvImJ_G0023237.1 mouse_genomes_project 17 20480088 20517322 + MGP_129S1SvImJ_P0045751 Zfp229 protein_coding protein_coding MGP_129S1SvImJ_T0045752.1 MGP_129S1SvImJ_G0023237.1 mouse_genomes_project 17 20482276 20497198 + MGP_129S1SvImJ_P0045752 Zfp229 protein_coding protein_coding MGP_129S1SvImJ_T0013235.1 MGP_129S1SvImJ_G0011324.1 mouse_genomes_project 17 10482396 10483141 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0045706.1 MGP_129S1SvImJ_G0023205.1 mouse_genomes_project 17 18953411 18974925 - MGP_129S1SvImJ_P0045706 protein_coding protein_coding MGP_129S1SvImJ_T0048105.1 MGP_129S1SvImJ_G0023863.1 mouse_genomes_project 17 49427236 49443300 - MGP_129S1SvImJ_P0048105 A530064D06Rik protein_coding protein_coding MGP_129S1SvImJ_T0048106.1 MGP_129S1SvImJ_G0023863.1 mouse_genomes_project 17 49427237 49443313 - MGP_129S1SvImJ_P0048106 A530064D06Rik protein_coding protein_coding MGP_129S1SvImJ_T0046328.1 MGP_129S1SvImJ_G0023392.1 mouse_genomes_project 17 25275582 25342983 + MGP_129S1SvImJ_P0046328 Axin1 protein_coding protein_coding MGP_129S1SvImJ_T0046329.1 MGP_129S1SvImJ_G0023392.1 mouse_genomes_project 17 25275722 25342413 + MGP_129S1SvImJ_P0046329 Axin1 protein_coding protein_coding MGP_129S1SvImJ_T0046330.1 MGP_129S1SvImJ_G0023392.1 mouse_genomes_project 17 25275844 25342466 + MGP_129S1SvImJ_P0046330 Axin1 protein_coding protein_coding MGP_129S1SvImJ_T0046331.1 MGP_129S1SvImJ_G0023392.1 mouse_genomes_project 17 25280246 25331503 + MGP_129S1SvImJ_P0046331 Axin1 protein_coding protein_coding MGP_129S1SvImJ_T0046332.1 MGP_129S1SvImJ_G0023392.1 mouse_genomes_project 17 25335331 25335974 + Axin1 protein_coding retained_intron MGP_129S1SvImJ_T0047242.1 MGP_129S1SvImJ_G0023597.1 mouse_genomes_project 17 35016220 35037518 + MGP_129S1SvImJ_P0047242 Ehmt2 protein_coding protein_coding MGP_129S1SvImJ_T0047243.1 MGP_129S1SvImJ_G0023597.1 mouse_genomes_project 17 35016250 35037514 + MGP_129S1SvImJ_P0047243 Ehmt2 protein_coding protein_coding MGP_129S1SvImJ_T0047244.1 MGP_129S1SvImJ_G0023597.1 mouse_genomes_project 17 35017485 35037511 + MGP_129S1SvImJ_P0047244 Ehmt2 protein_coding protein_coding MGP_129S1SvImJ_T0047245.1 MGP_129S1SvImJ_G0023597.1 mouse_genomes_project 17 35017492 35037518 + MGP_129S1SvImJ_P0047245 Ehmt2 protein_coding protein_coding MGP_129S1SvImJ_T0047246.1 MGP_129S1SvImJ_G0023597.1 mouse_genomes_project 17 35018215 35025431 + Ehmt2 protein_coding processed_transcript MGP_129S1SvImJ_T0047247.1 MGP_129S1SvImJ_G0023597.1 mouse_genomes_project 17 35028717 35029766 + Ehmt2 protein_coding retained_intron MGP_129S1SvImJ_T0047248.1 MGP_129S1SvImJ_G0023597.1 mouse_genomes_project 17 35028754 35029555 + Ehmt2 protein_coding retained_intron MGP_129S1SvImJ_T0047249.1 MGP_129S1SvImJ_G0023597.1 mouse_genomes_project 17 35029424 35030140 + Ehmt2 protein_coding retained_intron MGP_129S1SvImJ_T0047250.1 MGP_129S1SvImJ_G0023597.1 mouse_genomes_project 17 35029516 35032073 + MGP_129S1SvImJ_P0047250 Ehmt2 protein_coding protein_coding MGP_129S1SvImJ_T0047251.1 MGP_129S1SvImJ_G0023597.1 mouse_genomes_project 17 35030258 35031958 + Ehmt2 protein_coding processed_transcript MGP_129S1SvImJ_T0047252.1 MGP_129S1SvImJ_G0023597.1 mouse_genomes_project 17 35030912 35037514 + MGP_129S1SvImJ_P0047252 Ehmt2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047253.1 MGP_129S1SvImJ_G0023597.1 mouse_genomes_project 17 35030914 35032317 + MGP_129S1SvImJ_P0047253 Ehmt2 protein_coding protein_coding MGP_129S1SvImJ_T0047254.1 MGP_129S1SvImJ_G0023597.1 mouse_genomes_project 17 35032159 35035017 + Ehmt2 protein_coding retained_intron MGP_129S1SvImJ_T0047255.1 MGP_129S1SvImJ_G0023597.1 mouse_genomes_project 17 35034489 35037519 + Ehmt2 protein_coding retained_intron MGP_129S1SvImJ_T0100840.1 MGP_129S1SvImJ_G0038907.1 mouse_genomes_project 17 76593473 76593616 + Gm24475 snoRNA snoRNA MGP_129S1SvImJ_T0048605.1 MGP_129S1SvImJ_G0024034.1 mouse_genomes_project 17 78143796 78243200 + MGP_129S1SvImJ_P0048605 Rasgrp3 protein_coding protein_coding MGP_129S1SvImJ_T0048606.1 MGP_129S1SvImJ_G0024034.1 mouse_genomes_project 17 78173932 78243200 + MGP_129S1SvImJ_P0048606 Rasgrp3 protein_coding protein_coding MGP_129S1SvImJ_T0048046.1 MGP_129S1SvImJ_G0023850.1 mouse_genomes_project 17 48811130 48855649 + Gm20517 protein_coding retained_intron MGP_129S1SvImJ_T0048047.1 MGP_129S1SvImJ_G0023850.1 mouse_genomes_project 17 48811139 48856973 + Gm20517 protein_coding retained_intron MGP_129S1SvImJ_T0048049.1 MGP_129S1SvImJ_G0023850.1 mouse_genomes_project 17 48811154 48892524 + MGP_129S1SvImJ_P0048049 Gm20517 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046180.1 MGP_129S1SvImJ_G0023358.1 mouse_genomes_project 17 24646332 24651098 - MGP_129S1SvImJ_P0046180 Sox8 protein_coding protein_coding MGP_129S1SvImJ_T0046181.1 MGP_129S1SvImJ_G0023358.1 mouse_genomes_project 17 24648416 24650626 - MGP_129S1SvImJ_P0046181 Sox8 protein_coding protein_coding MGP_129S1SvImJ_T0046182.1 MGP_129S1SvImJ_G0023358.1 mouse_genomes_project 17 24649121 24651098 - MGP_129S1SvImJ_P0046182 Sox8 protein_coding protein_coding MGP_129S1SvImJ_T0003791.1 MGP_129S1SvImJ_G0003411.1 mouse_genomes_project 17 46687656 46690770 + Gm16172 antisense antisense MGP_129S1SvImJ_T0048454.1 MGP_129S1SvImJ_G0023994.1 mouse_genomes_project 17 70589556 70772673 + L3mbtl4 protein_coding retained_intron MGP_129S1SvImJ_T0048455.1 MGP_129S1SvImJ_G0023994.1 mouse_genomes_project 17 70589556 70944527 + MGP_129S1SvImJ_P0048455 L3mbtl4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048456.1 MGP_129S1SvImJ_G0023994.1 mouse_genomes_project 17 70589556 70955068 + MGP_129S1SvImJ_P0048456 L3mbtl4 protein_coding protein_coding MGP_129S1SvImJ_T0048457.1 MGP_129S1SvImJ_G0023994.1 mouse_genomes_project 17 70589556 71081326 + MGP_129S1SvImJ_P0048457 L3mbtl4 protein_coding protein_coding MGP_129S1SvImJ_T0017637.1 MGP_129S1SvImJ_G0015357.1 mouse_genomes_project 17 94456821 94462758 + 4930480K15Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0047224.1 MGP_129S1SvImJ_G0023593.1 mouse_genomes_project 17 34967688 34973923 - MGP_129S1SvImJ_P0047224 Cfb protein_coding protein_coding MGP_129S1SvImJ_T0047225.1 MGP_129S1SvImJ_G0023593.1 mouse_genomes_project 17 34968190 34970842 - MGP_129S1SvImJ_P0047225 Cfb protein_coding protein_coding MGP_129S1SvImJ_T0047226.1 MGP_129S1SvImJ_G0023593.1 mouse_genomes_project 17 34968200 34974331 - MGP_129S1SvImJ_P0047226 Cfb protein_coding protein_coding MGP_129S1SvImJ_T0047227.1 MGP_129S1SvImJ_G0023593.1 mouse_genomes_project 17 34968207 34969959 - MGP_129S1SvImJ_P0047227 Cfb protein_coding protein_coding MGP_129S1SvImJ_T0047228.1 MGP_129S1SvImJ_G0023593.1 mouse_genomes_project 17 34968228 34971127 - MGP_129S1SvImJ_P0047228 Cfb protein_coding protein_coding MGP_129S1SvImJ_T0047231.1 MGP_129S1SvImJ_G0023593.1 mouse_genomes_project 17 34968390 34970858 - MGP_129S1SvImJ_P0047231 Cfb protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047755.1 MGP_129S1SvImJ_G0023763.1 mouse_genomes_project 17 41713571 41726420 - MGP_129S1SvImJ_P0047755 Glyatl3 protein_coding protein_coding MGP_129S1SvImJ_T0045511.1 MGP_129S1SvImJ_G0023137.1 mouse_genomes_project 17 6047846 6048945 - Gm17087 protein_coding translated_processed_pseudogene MGP_129S1SvImJ_T0045512.1 MGP_129S1SvImJ_G0023137.1 mouse_genomes_project 17 6048393 6048864 - MGP_129S1SvImJ_P0045512 Gm17087 protein_coding protein_coding MGP_129S1SvImJ_T0047759.1 MGP_129S1SvImJ_G0023767.1 mouse_genomes_project 17 43398596 43457758 - MGP_129S1SvImJ_P0047759 Opn5 protein_coding protein_coding MGP_129S1SvImJ_T0006916.1 MGP_129S1SvImJ_G0005700.1 mouse_genomes_project 17 22660175 22667860 + 9530082P21Rik lincRNA lincRNA MGP_129S1SvImJ_T0006917.1 MGP_129S1SvImJ_G0005700.1 mouse_genomes_project 17 22666186 22671024 + 9530082P21Rik lincRNA lincRNA MGP_129S1SvImJ_T0006918.1 MGP_129S1SvImJ_G0005700.1 mouse_genomes_project 17 22666287 22668152 + 9530082P21Rik lincRNA lincRNA MGP_129S1SvImJ_T0045471.1 MGP_129S1SvImJ_G0023126.1 mouse_genomes_project 17 5477700 5554727 - MGP_129S1SvImJ_P0045471 protein_coding protein_coding MGP_129S1SvImJ_T0048518.1 MGP_129S1SvImJ_G0024006.1 mouse_genomes_project 17 73688365 73752140 - MGP_129S1SvImJ_P0048518 Emilin2 protein_coding protein_coding MGP_129S1SvImJ_T0102333.1 MGP_129S1SvImJ_G0040167.1 mouse_genomes_project 17 36434975 36435182 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0007000.1 MGP_129S1SvImJ_G0005761.1 mouse_genomes_project 17 90651003 90659203 - 4833418N02Rik lincRNA lincRNA MGP_129S1SvImJ_T0007001.1 MGP_129S1SvImJ_G0005761.1 mouse_genomes_project 17 90651038 90660325 - 4833418N02Rik lincRNA lincRNA MGP_129S1SvImJ_T0007002.1 MGP_129S1SvImJ_G0005761.1 mouse_genomes_project 17 90651365 90660011 - 4833418N02Rik lincRNA lincRNA MGP_129S1SvImJ_T0007003.1 MGP_129S1SvImJ_G0005761.1 mouse_genomes_project 17 90657775 90660290 - 4833418N02Rik lincRNA lincRNA MGP_129S1SvImJ_T0010214.1 MGP_129S1SvImJ_G0008330.1 mouse_genomes_project 17 29140730 29140793 + Mir7667 miRNA miRNA MGP_129S1SvImJ_T0013265.1 MGP_129S1SvImJ_G0011354.1 mouse_genomes_project 17 37504895 37505685 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013319.1 MGP_129S1SvImJ_G0011408.1 mouse_genomes_project 17 94133897 94134232 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0046109.1 MGP_129S1SvImJ_G0023340.1 mouse_genomes_project 17 24175195 24204427 + MGP_129S1SvImJ_P0046109 Clcn7 protein_coding protein_coding MGP_129S1SvImJ_T0046110.1 MGP_129S1SvImJ_G0023340.1 mouse_genomes_project 17 24175269 24188916 + Clcn7 protein_coding retained_intron MGP_129S1SvImJ_T0046111.1 MGP_129S1SvImJ_G0023340.1 mouse_genomes_project 17 24178365 24204421 + MGP_129S1SvImJ_P0046111 Clcn7 protein_coding protein_coding MGP_129S1SvImJ_T0046112.1 MGP_129S1SvImJ_G0023340.1 mouse_genomes_project 17 24188181 24192965 + MGP_129S1SvImJ_P0046112 Clcn7 protein_coding protein_coding MGP_129S1SvImJ_T0046113.1 MGP_129S1SvImJ_G0023340.1 mouse_genomes_project 17 24188688 24194764 + Clcn7 protein_coding processed_transcript MGP_129S1SvImJ_T0046114.1 MGP_129S1SvImJ_G0023340.1 mouse_genomes_project 17 24193552 24200263 + MGP_129S1SvImJ_P0046114 Clcn7 protein_coding protein_coding MGP_129S1SvImJ_T0046115.1 MGP_129S1SvImJ_G0023340.1 mouse_genomes_project 17 24201008 24202065 + Clcn7 protein_coding retained_intron MGP_129S1SvImJ_T0048335.1 MGP_129S1SvImJ_G0023951.1 mouse_genomes_project 17 58790620 58815592 - MGP_129S1SvImJ_P0048335 Slc25a23 protein_coding protein_coding MGP_129S1SvImJ_T0048336.1 MGP_129S1SvImJ_G0023951.1 mouse_genomes_project 17 58792108 58802629 - MGP_129S1SvImJ_P0048336 Slc25a23 protein_coding protein_coding MGP_129S1SvImJ_T0048337.1 MGP_129S1SvImJ_G0023951.1 mouse_genomes_project 17 58792394 58803632 - MGP_129S1SvImJ_P0048337 Slc25a23 protein_coding protein_coding MGP_129S1SvImJ_T0048338.1 MGP_129S1SvImJ_G0023951.1 mouse_genomes_project 17 58793948 58803385 - MGP_129S1SvImJ_P0048338 Slc25a23 protein_coding protein_coding MGP_129S1SvImJ_T0048339.1 MGP_129S1SvImJ_G0023951.1 mouse_genomes_project 17 58794092 58805189 - MGP_129S1SvImJ_P0048339 Slc25a23 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048340.1 MGP_129S1SvImJ_G0023951.1 mouse_genomes_project 17 58806028 58815548 - Slc25a23 protein_coding retained_intron MGP_129S1SvImJ_T0048618.1 MGP_129S1SvImJ_G0024041.1 mouse_genomes_project 17 81670566 81683299 + MGP_129S1SvImJ_P0048618 Gpatch11 protein_coding protein_coding MGP_129S1SvImJ_T0046129.1 MGP_129S1SvImJ_G0023345.1 mouse_genomes_project 17 24283338 24290964 - MGP_129S1SvImJ_P0046129 Gnptg protein_coding protein_coding MGP_129S1SvImJ_T0046130.1 MGP_129S1SvImJ_G0023345.1 mouse_genomes_project 17 24284324 24290956 - MGP_129S1SvImJ_P0046130 Gnptg protein_coding protein_coding MGP_129S1SvImJ_T0003745.1 MGP_129S1SvImJ_G0003376.1 mouse_genomes_project 17 23519718 23520219 + Rab26os antisense antisense MGP_129S1SvImJ_T0003746.1 MGP_129S1SvImJ_G0003376.1 mouse_genomes_project 17 23519737 23520218 + Rab26os antisense antisense MGP_129S1SvImJ_T0048462.1 MGP_129S1SvImJ_G0023997.1 mouse_genomes_project 17 71713295 71720096 + MGP_129S1SvImJ_P0048462 Zbtb14 protein_coding protein_coding MGP_129S1SvImJ_T0047720.1 MGP_129S1SvImJ_G0023736.1 mouse_genomes_project 17 38679921 38683403 + MGP_129S1SvImJ_P0047720 Olfr133 protein_coding protein_coding MGP_129S1SvImJ_T0047721.1 MGP_129S1SvImJ_G0023736.1 mouse_genomes_project 17 38683029 38684191 + MGP_129S1SvImJ_P0047721 Olfr133 protein_coding protein_coding MGP_129S1SvImJ_T0045456.1 MGP_129S1SvImJ_G0023117.1 mouse_genomes_project 17 3982079 4027984 - MGP_129S1SvImJ_P0045456 Ezr protein_coding protein_coding MGP_129S1SvImJ_T0045457.1 MGP_129S1SvImJ_G0023117.1 mouse_genomes_project 17 3984875 3986862 - Ezr protein_coding processed_transcript MGP_129S1SvImJ_T0048104.1 MGP_129S1SvImJ_G0023862.1 mouse_genomes_project 17 49426542 49443316 - MGP_129S1SvImJ_P0048104 protein_coding protein_coding MGP_129S1SvImJ_T0001003.1 MGP_129S1SvImJ_G0000933.1 mouse_genomes_project 17 8860492 8865492 + TEC TEC MGP_129S1SvImJ_T0046605.1 MGP_129S1SvImJ_G0023455.1 mouse_genomes_project 17 28459395 28497435 - MGP_129S1SvImJ_P0046605 Stk38 protein_coding protein_coding MGP_129S1SvImJ_T0046606.1 MGP_129S1SvImJ_G0023455.1 mouse_genomes_project 17 28459527 28461588 - Stk38 protein_coding processed_transcript MGP_129S1SvImJ_T0046607.1 MGP_129S1SvImJ_G0023455.1 mouse_genomes_project 17 28460747 28497435 - MGP_129S1SvImJ_P0046607 Stk38 protein_coding protein_coding MGP_129S1SvImJ_T0046608.1 MGP_129S1SvImJ_G0023455.1 mouse_genomes_project 17 28461449 28470404 - Stk38 protein_coding retained_intron MGP_129S1SvImJ_T0046609.1 MGP_129S1SvImJ_G0023455.1 mouse_genomes_project 17 28461602 28463230 - Stk38 protein_coding processed_transcript MGP_129S1SvImJ_T0046610.1 MGP_129S1SvImJ_G0023455.1 mouse_genomes_project 17 28462792 28470693 - Stk38 protein_coding retained_intron MGP_129S1SvImJ_T0046611.1 MGP_129S1SvImJ_G0023455.1 mouse_genomes_project 17 28462853 28467990 - Stk38 protein_coding processed_transcript MGP_129S1SvImJ_T0046612.1 MGP_129S1SvImJ_G0023455.1 mouse_genomes_project 17 28462853 28468525 - Stk38 protein_coding processed_transcript MGP_129S1SvImJ_T0046613.1 MGP_129S1SvImJ_G0023455.1 mouse_genomes_project 17 28463081 28468275 - Stk38 protein_coding processed_transcript MGP_129S1SvImJ_T0046614.1 MGP_129S1SvImJ_G0023455.1 mouse_genomes_project 17 28465907 28468260 - Stk38 protein_coding processed_transcript MGP_129S1SvImJ_T0046615.1 MGP_129S1SvImJ_G0023455.1 mouse_genomes_project 17 28468280 28497443 - Stk38 protein_coding processed_transcript MGP_129S1SvImJ_T0046616.1 MGP_129S1SvImJ_G0023455.1 mouse_genomes_project 17 28471767 28488186 - Stk38 protein_coding retained_intron MGP_129S1SvImJ_T0046617.1 MGP_129S1SvImJ_G0023455.1 mouse_genomes_project 17 28476150 28479638 - Stk38 protein_coding processed_transcript MGP_129S1SvImJ_T0046618.1 MGP_129S1SvImJ_G0023455.1 mouse_genomes_project 17 28479624 28497233 - Stk38 protein_coding processed_transcript MGP_129S1SvImJ_T0046619.1 MGP_129S1SvImJ_G0023455.1 mouse_genomes_project 17 28485694 28497394 - Stk38 protein_coding processed_transcript MGP_129S1SvImJ_T0047408.1 MGP_129S1SvImJ_G0023636.1 mouse_genomes_project 17 35485149 35488662 + MGP_129S1SvImJ_P0047408 H2-Q1 protein_coding protein_coding MGP_129S1SvImJ_T0099573.1 MGP_129S1SvImJ_G0037640.1 mouse_genomes_project 17 75009663 75009793 - Gm24736 snRNA snRNA MGP_129S1SvImJ_T0045870.1 MGP_129S1SvImJ_G0023282.1 mouse_genomes_project 17 22888740 22892119 - MGP_129S1SvImJ_P0045870 protein_coding protein_coding MGP_129S1SvImJ_T0010192.1 MGP_129S1SvImJ_G0008308.1 mouse_genomes_project 17 20031740 20033121 - miRNA miRNA MGP_129S1SvImJ_T0045877.1 MGP_129S1SvImJ_G0023285.1 mouse_genomes_project 17 22972611 22975984 + MGP_129S1SvImJ_P0045877 Gm5225 protein_coding protein_coding MGP_129S1SvImJ_T0046474.1 MGP_129S1SvImJ_G0023427.1 mouse_genomes_project 17 27079558 27149178 - MGP_129S1SvImJ_P0046474 D17Wsu92e protein_coding protein_coding MGP_129S1SvImJ_T0046475.1 MGP_129S1SvImJ_G0023427.1 mouse_genomes_project 17 27079572 27149111 - MGP_129S1SvImJ_P0046475 D17Wsu92e protein_coding protein_coding MGP_129S1SvImJ_T0046476.1 MGP_129S1SvImJ_G0023427.1 mouse_genomes_project 17 27095819 27149162 - MGP_129S1SvImJ_P0046476 D17Wsu92e protein_coding protein_coding MGP_129S1SvImJ_T0047115.1 MGP_129S1SvImJ_G0023575.1 mouse_genomes_project 17 34503913 34609153 - MGP_129S1SvImJ_P0047115 protein_coding protein_coding MGP_129S1SvImJ_T0047116.1 MGP_129S1SvImJ_G0023575.1 mouse_genomes_project 17 34527535 34575670 - protein_coding unprocessed_pseudogene MGP_129S1SvImJ_T0102312.1 MGP_129S1SvImJ_G0040146.1 mouse_genomes_project 17 33221535 33222350 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0011457.1 MGP_129S1SvImJ_G0009573.1 mouse_genomes_project 17 88863535 88863623 + Gm27435 misc_RNA misc_RNA MGP_129S1SvImJ_T0001005.1 MGP_129S1SvImJ_G0000935.1 mouse_genomes_project 17 9347238 9353702 - TEC TEC MGP_129S1SvImJ_T0011443.1 MGP_129S1SvImJ_G0009559.1 mouse_genomes_project 17 31842619 31842890 + Gm25883 misc_RNA misc_RNA MGP_129S1SvImJ_T0102301.1 MGP_129S1SvImJ_G0040135.1 mouse_genomes_project 17 20008590 20008773 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0013263.1 MGP_129S1SvImJ_G0011352.1 mouse_genomes_project 17 36816813 36817806 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048646.1 MGP_129S1SvImJ_G0024053.1 mouse_genomes_project 17 82576050 82584113 - MGP_129S1SvImJ_P0048646 Cyp1b1 protein_coding protein_coding MGP_129S1SvImJ_T0047705.1 MGP_129S1SvImJ_G0023723.1 mouse_genomes_project 17 38100304 38100955 + MGP_129S1SvImJ_P0047705 protein_coding protein_coding MGP_129S1SvImJ_T0048315.1 MGP_129S1SvImJ_G0023937.1 mouse_genomes_project 17 58473495 58479451 - MGP_129S1SvImJ_P0048315 Nrtn protein_coding protein_coding MGP_129S1SvImJ_T0048352.1 MGP_129S1SvImJ_G0023959.1 mouse_genomes_project 17 58971368 59001221 - MGP_129S1SvImJ_P0048352 C3 protein_coding protein_coding MGP_129S1SvImJ_T0048353.1 MGP_129S1SvImJ_G0023959.1 mouse_genomes_project 17 58971405 58995912 - MGP_129S1SvImJ_P0048353 C3 protein_coding protein_coding MGP_129S1SvImJ_T0048354.1 MGP_129S1SvImJ_G0023959.1 mouse_genomes_project 17 58973615 59001088 - MGP_129S1SvImJ_P0048354 C3 protein_coding protein_coding MGP_129S1SvImJ_T0048355.1 MGP_129S1SvImJ_G0023959.1 mouse_genomes_project 17 58988888 58993071 - C3 protein_coding processed_transcript MGP_129S1SvImJ_T0047815.1 MGP_129S1SvImJ_G0023788.1 mouse_genomes_project 17 46519828 46535336 + MGP_129S1SvImJ_P0047815 Aars2 protein_coding protein_coding MGP_129S1SvImJ_T0046973.1 MGP_129S1SvImJ_G0023544.1 mouse_genomes_project 17 33878638 33879591 + Rgl2 protein_coding retained_intron MGP_129S1SvImJ_T0046974.1 MGP_129S1SvImJ_G0023544.1 mouse_genomes_project 17 33878677 33886774 + MGP_129S1SvImJ_P0046974 Rgl2 protein_coding protein_coding MGP_129S1SvImJ_T0046975.1 MGP_129S1SvImJ_G0023544.1 mouse_genomes_project 17 33878999 33881302 + Rgl2 protein_coding processed_transcript MGP_129S1SvImJ_T0046976.1 MGP_129S1SvImJ_G0023544.1 mouse_genomes_project 17 33879069 33881467 + Rgl2 protein_coding retained_intron MGP_129S1SvImJ_T0046977.1 MGP_129S1SvImJ_G0023544.1 mouse_genomes_project 17 33879978 33881125 + Rgl2 protein_coding retained_intron MGP_129S1SvImJ_T0046978.1 MGP_129S1SvImJ_G0023544.1 mouse_genomes_project 17 33879987 33881609 + Rgl2 protein_coding processed_transcript MGP_129S1SvImJ_T0046979.1 MGP_129S1SvImJ_G0023544.1 mouse_genomes_project 17 33880003 33881042 + Rgl2 protein_coding retained_intron MGP_129S1SvImJ_T0046980.1 MGP_129S1SvImJ_G0023544.1 mouse_genomes_project 17 33880306 33881599 + Rgl2 protein_coding retained_intron MGP_129S1SvImJ_T0046981.1 MGP_129S1SvImJ_G0023544.1 mouse_genomes_project 17 33881147 33882313 + Rgl2 protein_coding retained_intron MGP_129S1SvImJ_T0046982.1 MGP_129S1SvImJ_G0023544.1 mouse_genomes_project 17 33881226 33882236 + Rgl2 protein_coding retained_intron MGP_129S1SvImJ_T0046983.1 MGP_129S1SvImJ_G0023544.1 mouse_genomes_project 17 33883020 33886311 + MGP_129S1SvImJ_P0046983 Rgl2 protein_coding protein_coding MGP_129S1SvImJ_T0046984.1 MGP_129S1SvImJ_G0023544.1 mouse_genomes_project 17 33884483 33885977 + Rgl2 protein_coding retained_intron MGP_129S1SvImJ_T0046903.1 MGP_129S1SvImJ_G0023532.1 mouse_genomes_project 17 33553046 33560697 + MGP_129S1SvImJ_P0046903 Pram1 protein_coding protein_coding MGP_129S1SvImJ_T0046904.1 MGP_129S1SvImJ_G0023532.1 mouse_genomes_project 17 33553085 33560691 + MGP_129S1SvImJ_P0046904 Pram1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046905.1 MGP_129S1SvImJ_G0023532.1 mouse_genomes_project 17 33559807 33560629 + Pram1 protein_coding retained_intron MGP_129S1SvImJ_T0010234.1 MGP_129S1SvImJ_G0008350.1 mouse_genomes_project 17 57826556 57826669 - Gm44397 miRNA miRNA MGP_129S1SvImJ_T0048207.1 MGP_129S1SvImJ_G0023892.1 mouse_genomes_project 17 55548938 55580721 - MGP_129S1SvImJ_P0048207 Sult1c1 protein_coding protein_coding MGP_129S1SvImJ_T0045828.1 MGP_129S1SvImJ_G0023267.1 mouse_genomes_project 17 22642049 22653664 + MGP_129S1SvImJ_P0045828 Pkmyt1 protein_coding protein_coding MGP_129S1SvImJ_T0003792.1 MGP_129S1SvImJ_G0003412.1 mouse_genomes_project 17 48897423 48900894 + Tomm6os antisense antisense MGP_129S1SvImJ_T0045785.1 MGP_129S1SvImJ_G0023253.1 mouse_genomes_project 17 22085244 22104590 - MGP_129S1SvImJ_P0045785 Zfp40 protein_coding protein_coding MGP_129S1SvImJ_T0045786.1 MGP_129S1SvImJ_G0023253.1 mouse_genomes_project 17 22085272 22104598 - Zfp40 protein_coding processed_transcript MGP_129S1SvImJ_T0045787.1 MGP_129S1SvImJ_G0023253.1 mouse_genomes_project 17 22088665 22104639 - Zfp40 protein_coding processed_transcript MGP_129S1SvImJ_T0045788.1 MGP_129S1SvImJ_G0023253.1 mouse_genomes_project 17 22102733 22104640 - MGP_129S1SvImJ_P0045788 Zfp40 protein_coding protein_coding MGP_129S1SvImJ_T0048727.1 MGP_129S1SvImJ_G0024089.1 mouse_genomes_project 17 88955792 88959747 - MGP_129S1SvImJ_P0048727 Six2 protein_coding protein_coding MGP_129S1SvImJ_T0048728.1 MGP_129S1SvImJ_G0024089.1 mouse_genomes_project 17 88955797 88959727 - MGP_129S1SvImJ_P0048728 Six2 protein_coding protein_coding MGP_129S1SvImJ_T0046870.1 MGP_129S1SvImJ_G0023523.1 mouse_genomes_project 17 33100562 33102634 + MGP_129S1SvImJ_P0046870 Olfr239 protein_coding protein_coding MGP_129S1SvImJ_T0048069.1 MGP_129S1SvImJ_G0023856.1 mouse_genomes_project 17 48939552 48948726 + MGP_129S1SvImJ_P0048069 Pgc protein_coding protein_coding MGP_129S1SvImJ_T0048070.1 MGP_129S1SvImJ_G0023856.1 mouse_genomes_project 17 48939554 48946636 + MGP_129S1SvImJ_P0048070 Pgc protein_coding protein_coding MGP_129S1SvImJ_T0010217.1 MGP_129S1SvImJ_G0008333.1 mouse_genomes_project 17 33994421 33994531 - Mir219a-1 miRNA miRNA MGP_129S1SvImJ_T0010200.1 MGP_129S1SvImJ_G0008316.1 mouse_genomes_project 17 24876900 24876972 + Mir6966 miRNA miRNA MGP_129S1SvImJ_T0099552.1 MGP_129S1SvImJ_G0037619.1 mouse_genomes_project 17 29907015 29907088 + Gm25049 snRNA snRNA MGP_129S1SvImJ_T0045777.1 MGP_129S1SvImJ_G0023249.1 mouse_genomes_project 17 21605877 21621056 + MGP_129S1SvImJ_P0045777 Gm5493 protein_coding protein_coding MGP_129S1SvImJ_T0017591.1 MGP_129S1SvImJ_G0015346.1 mouse_genomes_project 17 33545750 33560696 + Gm20507 processed_transcript processed_transcript MGP_129S1SvImJ_T0010225.1 MGP_129S1SvImJ_G0008341.1 mouse_genomes_project 17 35395542 35395603 + Mir6975 miRNA miRNA MGP_129S1SvImJ_T0010208.1 MGP_129S1SvImJ_G0008324.1 mouse_genomes_project 17 26586193 26586254 - Mir7214 miRNA miRNA MGP_129S1SvImJ_T0013315.1 MGP_129S1SvImJ_G0011404.1 mouse_genomes_project 17 88194640 88221154 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048684.1 MGP_129S1SvImJ_G0024072.1 mouse_genomes_project 17 86427791 86561092 + MGP_129S1SvImJ_P0048684 Eml4 protein_coding protein_coding MGP_129S1SvImJ_T0048685.1 MGP_129S1SvImJ_G0024072.1 mouse_genomes_project 17 86427791 86561092 + MGP_129S1SvImJ_P0048685 Eml4 protein_coding protein_coding MGP_129S1SvImJ_T0048686.1 MGP_129S1SvImJ_G0024072.1 mouse_genomes_project 17 86427791 86561092 + MGP_129S1SvImJ_P0048686 Eml4 protein_coding protein_coding MGP_129S1SvImJ_T0006966.1 MGP_129S1SvImJ_G0005740.1 mouse_genomes_project 17 50463210 50464463 - 1700008K24Rik lincRNA lincRNA MGP_129S1SvImJ_T0006967.1 MGP_129S1SvImJ_G0005740.1 mouse_genomes_project 17 50463210 50464476 - 1700008K24Rik lincRNA lincRNA MGP_129S1SvImJ_T0006968.1 MGP_129S1SvImJ_G0005740.1 mouse_genomes_project 17 50463212 50464441 - 1700008K24Rik lincRNA lincRNA MGP_129S1SvImJ_T0006969.1 MGP_129S1SvImJ_G0005740.1 mouse_genomes_project 17 50463212 50464384 - 1700008K24Rik lincRNA lincRNA MGP_129S1SvImJ_T0006970.1 MGP_129S1SvImJ_G0005740.1 mouse_genomes_project 17 50463320 50464483 - 1700008K24Rik lincRNA lincRNA MGP_129S1SvImJ_T0003778.1 MGP_129S1SvImJ_G0003401.1 mouse_genomes_project 17 36059994 36066848 - Ppp1r18os antisense antisense MGP_129S1SvImJ_T0046712.1 MGP_129S1SvImJ_G0023481.1 mouse_genomes_project 17 30858335 30862742 - MGP_129S1SvImJ_P0046712 Tff3 protein_coding protein_coding MGP_129S1SvImJ_T0046120.1 MGP_129S1SvImJ_G0023342.1 mouse_genomes_project 17 24228023 24231131 + MGP_129S1SvImJ_P0046120 BC003965 protein_coding protein_coding MGP_129S1SvImJ_T0102360.1 MGP_129S1SvImJ_G0040194.1 mouse_genomes_project 17 37784691 37785530 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0046437.1 MGP_129S1SvImJ_G0023419.1 mouse_genomes_project 17 26445328 26460018 - MGP_129S1SvImJ_P0046437 Lemd2 protein_coding protein_coding MGP_129S1SvImJ_T0047453.1 MGP_129S1SvImJ_G0023650.1 mouse_genomes_project 17 35852413 35858423 - MGP_129S1SvImJ_P0047453 Gtf2h4 protein_coding protein_coding MGP_129S1SvImJ_T0047454.1 MGP_129S1SvImJ_G0023650.1 mouse_genomes_project 17 35852421 35853457 - Gtf2h4 protein_coding retained_intron MGP_129S1SvImJ_T0047455.1 MGP_129S1SvImJ_G0023650.1 mouse_genomes_project 17 35852422 35854536 - Gtf2h4 protein_coding retained_intron MGP_129S1SvImJ_T0047456.1 MGP_129S1SvImJ_G0023650.1 mouse_genomes_project 17 35852424 35858302 - MGP_129S1SvImJ_P0047456 Gtf2h4 protein_coding protein_coding MGP_129S1SvImJ_T0047457.1 MGP_129S1SvImJ_G0023650.1 mouse_genomes_project 17 35852525 35858387 - MGP_129S1SvImJ_P0047457 Gtf2h4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047458.1 MGP_129S1SvImJ_G0023650.1 mouse_genomes_project 17 35855069 35858372 - Gtf2h4 protein_coding retained_intron MGP_129S1SvImJ_T0047459.1 MGP_129S1SvImJ_G0023650.1 mouse_genomes_project 17 35855426 35858374 - MGP_129S1SvImJ_P0047459 Gtf2h4 protein_coding protein_coding MGP_129S1SvImJ_T0047460.1 MGP_129S1SvImJ_G0023650.1 mouse_genomes_project 17 35856027 35858201 - MGP_129S1SvImJ_P0047460 Gtf2h4 protein_coding protein_coding MGP_129S1SvImJ_T0047461.1 MGP_129S1SvImJ_G0023650.1 mouse_genomes_project 17 35856439 35858365 - Gtf2h4 protein_coding retained_intron MGP_129S1SvImJ_T0047462.1 MGP_129S1SvImJ_G0023650.1 mouse_genomes_project 17 35856576 35857982 - Gtf2h4 protein_coding retained_intron MGP_129S1SvImJ_T0047463.1 MGP_129S1SvImJ_G0023650.1 mouse_genomes_project 17 35856726 35858243 - Gtf2h4 protein_coding processed_transcript MGP_129S1SvImJ_T0047464.1 MGP_129S1SvImJ_G0023650.1 mouse_genomes_project 17 35856741 35858343 - MGP_129S1SvImJ_P0047464 Gtf2h4 protein_coding protein_coding MGP_129S1SvImJ_T0010209.1 MGP_129S1SvImJ_G0008325.1 mouse_genomes_project 17 26603968 26604044 + Mir7216 miRNA miRNA MGP_129S1SvImJ_T0006919.1 MGP_129S1SvImJ_G0005701.1 mouse_genomes_project 17 22709129 22712816 + D930048G16Rik lincRNA lincRNA MGP_129S1SvImJ_T0046456.1 MGP_129S1SvImJ_G0023424.1 mouse_genomes_project 17 26950243 26955104 - MGP_129S1SvImJ_P0046456 Rps10 protein_coding protein_coding MGP_129S1SvImJ_T0046457.1 MGP_129S1SvImJ_G0023424.1 mouse_genomes_project 17 26950245 26956458 - MGP_129S1SvImJ_P0046457 Rps10 protein_coding protein_coding MGP_129S1SvImJ_T0046458.1 MGP_129S1SvImJ_G0023424.1 mouse_genomes_project 17 26950246 26955068 - MGP_129S1SvImJ_P0046458 Rps10 protein_coding protein_coding MGP_129S1SvImJ_T0046459.1 MGP_129S1SvImJ_G0023424.1 mouse_genomes_project 17 26950286 26954303 - MGP_129S1SvImJ_P0046459 Rps10 protein_coding protein_coding MGP_129S1SvImJ_T0046460.1 MGP_129S1SvImJ_G0023424.1 mouse_genomes_project 17 26950851 26955104 - Rps10 protein_coding processed_transcript MGP_129S1SvImJ_T0046461.1 MGP_129S1SvImJ_G0023424.1 mouse_genomes_project 17 26951483 26954082 - Rps10 protein_coding retained_intron MGP_129S1SvImJ_T0046462.1 MGP_129S1SvImJ_G0023424.1 mouse_genomes_project 17 26951779 26955057 - Rps10 protein_coding retained_intron MGP_129S1SvImJ_T0046463.1 MGP_129S1SvImJ_G0023424.1 mouse_genomes_project 17 26953982 26955072 - Rps10 protein_coding processed_transcript MGP_129S1SvImJ_T0045876.1 MGP_129S1SvImJ_G0023284.1 mouse_genomes_project 17 22939336 22943902 - MGP_129S1SvImJ_P0045876 Prss22 protein_coding protein_coding MGP_129S1SvImJ_T0047071.1 MGP_129S1SvImJ_G0023562.1 mouse_genomes_project 17 34189843 34199396 + MGP_129S1SvImJ_P0047071 Tap1 protein_coding protein_coding MGP_129S1SvImJ_T0047072.1 MGP_129S1SvImJ_G0023562.1 mouse_genomes_project 17 34190018 34194432 + Tap1 protein_coding retained_intron MGP_129S1SvImJ_T0047073.1 MGP_129S1SvImJ_G0023562.1 mouse_genomes_project 17 34190024 34199396 + Tap1 protein_coding retained_intron MGP_129S1SvImJ_T0047074.1 MGP_129S1SvImJ_G0023562.1 mouse_genomes_project 17 34190092 34199390 + MGP_129S1SvImJ_P0047074 Tap1 protein_coding protein_coding MGP_129S1SvImJ_T0047075.1 MGP_129S1SvImJ_G0023562.1 mouse_genomes_project 17 34192046 34199391 + Tap1 protein_coding retained_intron MGP_129S1SvImJ_T0047076.1 MGP_129S1SvImJ_G0023562.1 mouse_genomes_project 17 34192907 34195739 + MGP_129S1SvImJ_P0047076 Tap1 protein_coding protein_coding MGP_129S1SvImJ_T0047077.1 MGP_129S1SvImJ_G0023562.1 mouse_genomes_project 17 34195209 34198758 + Tap1 protein_coding retained_intron MGP_129S1SvImJ_T0046488.1 MGP_129S1SvImJ_G0023432.1 mouse_genomes_project 17 27414128 27430555 - MGP_129S1SvImJ_P0046488 Tcp11 protein_coding protein_coding MGP_129S1SvImJ_T0046489.1 MGP_129S1SvImJ_G0023432.1 mouse_genomes_project 17 27414129 27430610 - MGP_129S1SvImJ_P0046489 Tcp11 protein_coding protein_coding MGP_129S1SvImJ_T0046490.1 MGP_129S1SvImJ_G0023432.1 mouse_genomes_project 17 27414132 27430538 - MGP_129S1SvImJ_P0046490 Tcp11 protein_coding protein_coding MGP_129S1SvImJ_T0046491.1 MGP_129S1SvImJ_G0023432.1 mouse_genomes_project 17 27414178 27415858 - Tcp11 protein_coding processed_transcript MGP_129S1SvImJ_T0046492.1 MGP_129S1SvImJ_G0023432.1 mouse_genomes_project 17 27417017 27430610 - MGP_129S1SvImJ_P0046492 Tcp11 protein_coding protein_coding MGP_129S1SvImJ_T0046493.1 MGP_129S1SvImJ_G0023432.1 mouse_genomes_project 17 27422093 27430572 - MGP_129S1SvImJ_P0046493 Tcp11 protein_coding protein_coding MGP_129S1SvImJ_T0046121.1 MGP_129S1SvImJ_G0023343.1 mouse_genomes_project 17 24231893 24284451 + MGP_129S1SvImJ_P0046121 protein_coding protein_coding MGP_129S1SvImJ_T0046122.1 MGP_129S1SvImJ_G0023343.1 mouse_genomes_project 17 24232416 24284451 + MGP_129S1SvImJ_P0046122 protein_coding protein_coding MGP_129S1SvImJ_T0046123.1 MGP_129S1SvImJ_G0023343.1 mouse_genomes_project 17 24232965 24252645 + MGP_129S1SvImJ_P0046123 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046124.1 MGP_129S1SvImJ_G0023343.1 mouse_genomes_project 17 24257580 24260273 + protein_coding retained_intron MGP_129S1SvImJ_T0046125.1 MGP_129S1SvImJ_G0023343.1 mouse_genomes_project 17 24272622 24279478 + MGP_129S1SvImJ_P0046125 protein_coding protein_coding MGP_129S1SvImJ_T0046126.1 MGP_129S1SvImJ_G0023343.1 mouse_genomes_project 17 24272665 24284450 + MGP_129S1SvImJ_P0046126 protein_coding protein_coding MGP_129S1SvImJ_T0046128.1 MGP_129S1SvImJ_G0023343.1 mouse_genomes_project 17 24272862 24281875 + MGP_129S1SvImJ_P0046128 protein_coding protein_coding MGP_129S1SvImJ_T0048700.1 MGP_129S1SvImJ_G0024076.1 mouse_genomes_project 17 86942260 86960418 - MGP_129S1SvImJ_P0048700 Haao protein_coding protein_coding MGP_129S1SvImJ_T0045744.1 MGP_129S1SvImJ_G0023234.1 mouse_genomes_project 17 20436603 20436862 + MGP_129S1SvImJ_P0045744 Gm10509 protein_coding protein_coding MGP_129S1SvImJ_T0045566.1 MGP_129S1SvImJ_G0023154.1 mouse_genomes_project 17 10586738 10589130 + Tcp1 protein_coding processed_transcript MGP_129S1SvImJ_T0045567.1 MGP_129S1SvImJ_G0023154.1 mouse_genomes_project 17 10587476 10589395 + MGP_129S1SvImJ_P0045567 Tcp1 protein_coding protein_coding MGP_129S1SvImJ_T0045568.1 MGP_129S1SvImJ_G0023154.1 mouse_genomes_project 17 10587486 10591244 + Tcp1 protein_coding retained_intron MGP_129S1SvImJ_T0045569.1 MGP_129S1SvImJ_G0023154.1 mouse_genomes_project 17 10587486 10618978 + Tcp1 protein_coding retained_intron MGP_129S1SvImJ_T0045570.1 MGP_129S1SvImJ_G0023154.1 mouse_genomes_project 17 10587512 10590574 + Tcp1 protein_coding retained_intron MGP_129S1SvImJ_T0045571.1 MGP_129S1SvImJ_G0023154.1 mouse_genomes_project 17 10587603 10595492 + MGP_129S1SvImJ_P0045571 Tcp1 protein_coding protein_coding MGP_129S1SvImJ_T0045572.1 MGP_129S1SvImJ_G0023154.1 mouse_genomes_project 17 10590688 10591656 + Tcp1 protein_coding retained_intron MGP_129S1SvImJ_T0045573.1 MGP_129S1SvImJ_G0023154.1 mouse_genomes_project 17 10591132 10593748 + Tcp1 protein_coding retained_intron MGP_129S1SvImJ_T0045574.1 MGP_129S1SvImJ_G0023154.1 mouse_genomes_project 17 10591296 10592164 + Tcp1 protein_coding retained_intron MGP_129S1SvImJ_T0048415.1 MGP_129S1SvImJ_G0023983.1 mouse_genomes_project 17 68132537 68254182 - MGP_129S1SvImJ_P0048415 Ankrd12 protein_coding protein_coding MGP_129S1SvImJ_T0048416.1 MGP_129S1SvImJ_G0023983.1 mouse_genomes_project 17 68133049 68137431 - Ankrd12 protein_coding processed_transcript MGP_129S1SvImJ_T0048417.1 MGP_129S1SvImJ_G0023983.1 mouse_genomes_project 17 68140880 68148205 - Ankrd12 protein_coding processed_transcript MGP_129S1SvImJ_T0048418.1 MGP_129S1SvImJ_G0023983.1 mouse_genomes_project 17 68152295 68254158 - MGP_129S1SvImJ_P0048418 Ankrd12 protein_coding protein_coding MGP_129S1SvImJ_T0048419.1 MGP_129S1SvImJ_G0023983.1 mouse_genomes_project 17 68189301 68254180 - Ankrd12 protein_coding retained_intron MGP_129S1SvImJ_T0048420.1 MGP_129S1SvImJ_G0023983.1 mouse_genomes_project 17 68206616 68254225 - Ankrd12 protein_coding retained_intron MGP_129S1SvImJ_T0048421.1 MGP_129S1SvImJ_G0023983.1 mouse_genomes_project 17 68206957 68254175 - Ankrd12 protein_coding retained_intron MGP_129S1SvImJ_T0048422.1 MGP_129S1SvImJ_G0023983.1 mouse_genomes_project 17 68223928 68224783 - Ankrd12 protein_coding processed_transcript MGP_129S1SvImJ_T0098536.1 MGP_129S1SvImJ_G0036621.1 mouse_genomes_project 17 87068099 87068208 + Gm23905 rRNA rRNA MGP_129S1SvImJ_T0013237.1 MGP_129S1SvImJ_G0011326.1 mouse_genomes_project 17 10652761 10653184 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0101651.1 MGP_129S1SvImJ_G0039682.1 mouse_genomes_project 17 91590396 91595888 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101652.1 MGP_129S1SvImJ_G0039682.1 mouse_genomes_project 17 91595596 91595995 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0102349.1 MGP_129S1SvImJ_G0040183.1 mouse_genomes_project 17 37070561 37070609 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0045953.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23497668 23519409 - MGP_129S1SvImJ_P0045953 Traf7 protein_coding protein_coding MGP_129S1SvImJ_T0045954.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23497954 23501592 - Traf7 protein_coding retained_intron MGP_129S1SvImJ_T0045955.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23497954 23519361 - MGP_129S1SvImJ_P0045955 Traf7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045956.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23497954 23510529 - MGP_129S1SvImJ_P0045956 Traf7 protein_coding protein_coding MGP_129S1SvImJ_T0045957.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23497954 23510529 - MGP_129S1SvImJ_P0045957 Traf7 protein_coding protein_coding MGP_129S1SvImJ_T0045958.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23497954 23519317 - MGP_129S1SvImJ_P0045958 Traf7 protein_coding protein_coding MGP_129S1SvImJ_T0045959.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23497954 23519321 - MGP_129S1SvImJ_P0045959 Traf7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045960.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23497958 23500137 - Traf7 protein_coding retained_intron MGP_129S1SvImJ_T0045961.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23499166 23499616 - Traf7 protein_coding retained_intron MGP_129S1SvImJ_T0045962.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23499317 23501476 - Traf7 protein_coding retained_intron MGP_129S1SvImJ_T0045963.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23499589 23501671 - Traf7 protein_coding retained_intron MGP_129S1SvImJ_T0045964.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23500700 23504650 - MGP_129S1SvImJ_P0045964 Traf7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045965.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23500791 23506050 - MGP_129S1SvImJ_P0045965 Traf7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045966.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23501350 23519334 - MGP_129S1SvImJ_P0045966 Traf7 protein_coding protein_coding MGP_129S1SvImJ_T0045967.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23503942 23504549 - Traf7 protein_coding retained_intron MGP_129S1SvImJ_T0045968.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23504369 23518960 - MGP_129S1SvImJ_P0045968 Traf7 protein_coding protein_coding MGP_129S1SvImJ_T0045969.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23504552 23519317 - MGP_129S1SvImJ_P0045969 Traf7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045970.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23504564 23519304 - MGP_129S1SvImJ_P0045970 Traf7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045971.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23504571 23519382 - MGP_129S1SvImJ_P0045971 Traf7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045972.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23504647 23519019 - MGP_129S1SvImJ_P0045972 Traf7 protein_coding protein_coding MGP_129S1SvImJ_T0045973.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23505231 23519317 - MGP_129S1SvImJ_P0045973 Traf7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045974.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23506030 23519292 - MGP_129S1SvImJ_P0045974 Traf7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045975.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23507610 23519321 - Traf7 protein_coding retained_intron MGP_129S1SvImJ_T0045976.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23507875 23519339 - Traf7 protein_coding processed_transcript MGP_129S1SvImJ_T0045977.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23509692 23519322 - Traf7 protein_coding processed_transcript MGP_129S1SvImJ_T0045978.1 MGP_129S1SvImJ_G0023305.1 mouse_genomes_project 17 23509893 23519255 - Traf7 protein_coding retained_intron MGP_129S1SvImJ_T0048102.1 MGP_129S1SvImJ_G0023860.1 mouse_genomes_project 17 49312991 49314540 - MGP_129S1SvImJ_P0048102 1700122O11Rik protein_coding protein_coding MGP_129S1SvImJ_T0048316.1 MGP_129S1SvImJ_G0023938.1 mouse_genomes_project 17 58486667 58491781 + MGP_129S1SvImJ_P0048316 Dus3l protein_coding protein_coding MGP_129S1SvImJ_T0045401.1 MGP_129S1SvImJ_G0023101.1 mouse_genomes_project 17 620904 692170 - MGP_129S1SvImJ_P0045401 Nox3 protein_coding protein_coding MGP_129S1SvImJ_T0001017.1 MGP_129S1SvImJ_G0000946.1 mouse_genomes_project 17 53331771 53334058 + TEC TEC MGP_129S1SvImJ_T0013285.1 MGP_129S1SvImJ_G0011374.1 mouse_genomes_project 17 55268511 55269278 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0006921.1 MGP_129S1SvImJ_G0005703.1 mouse_genomes_project 17 25103328 25105986 + 1700022N22Rik lincRNA lincRNA MGP_129S1SvImJ_T0046402.1 MGP_129S1SvImJ_G0023407.1 mouse_genomes_project 17 26039754 26042654 - MGP_129S1SvImJ_P0046402 Nkx2-5 protein_coding protein_coding MGP_129S1SvImJ_T0046023.1 MGP_129S1SvImJ_G0023320.1 mouse_genomes_project 17 23742540 23752786 + MGP_129S1SvImJ_P0046023 Rpl3l protein_coding unknown_likely_coding MGP_129S1SvImJ_T0046024.1 MGP_129S1SvImJ_G0023320.1 mouse_genomes_project 17 23742712 23752873 + MGP_129S1SvImJ_P0046024 Rpl3l protein_coding protein_coding MGP_129S1SvImJ_T0046025.1 MGP_129S1SvImJ_G0023320.1 mouse_genomes_project 17 23743066 23750095 + MGP_129S1SvImJ_P0046025 Rpl3l protein_coding protein_coding MGP_129S1SvImJ_T0046026.1 MGP_129S1SvImJ_G0023320.1 mouse_genomes_project 17 23749414 23752873 + MGP_129S1SvImJ_P0046026 Rpl3l protein_coding protein_coding MGP_129S1SvImJ_T0046842.1 MGP_129S1SvImJ_G0023513.1 mouse_genomes_project 17 32698245 32713016 - MGP_129S1SvImJ_P0046842 Zfp799 protein_coding protein_coding MGP_129S1SvImJ_T0046843.1 MGP_129S1SvImJ_G0023513.1 mouse_genomes_project 17 32698251 32705008 - MGP_129S1SvImJ_P0046843 Zfp799 protein_coding protein_coding MGP_129S1SvImJ_T0046844.1 MGP_129S1SvImJ_G0023513.1 mouse_genomes_project 17 32703631 32712983 - MGP_129S1SvImJ_P0046844 Zfp799 protein_coding protein_coding MGP_129S1SvImJ_T0046845.1 MGP_129S1SvImJ_G0023513.1 mouse_genomes_project 17 32703885 32713001 - MGP_129S1SvImJ_P0046845 Zfp799 protein_coding protein_coding MGP_129S1SvImJ_T0046846.1 MGP_129S1SvImJ_G0023513.1 mouse_genomes_project 17 32704249 32712970 - MGP_129S1SvImJ_P0046846 Zfp799 protein_coding protein_coding MGP_129S1SvImJ_T0046324.1 MGP_129S1SvImJ_G0023390.1 mouse_genomes_project 17 25248662 25260334 + MGP_129S1SvImJ_P0046324 Tmem8 protein_coding protein_coding MGP_129S1SvImJ_T0046325.1 MGP_129S1SvImJ_G0023390.1 mouse_genomes_project 17 25256521 25260334 + MGP_129S1SvImJ_P0046325 Tmem8 protein_coding protein_coding MGP_129S1SvImJ_T0046158.1 MGP_129S1SvImJ_G0023352.1 mouse_genomes_project 17 24402004 24404287 - MGP_129S1SvImJ_P0046158 Tpsab1 protein_coding protein_coding MGP_129S1SvImJ_T0046159.1 MGP_129S1SvImJ_G0023352.1 mouse_genomes_project 17 24402005 24404322 - Tpsab1 protein_coding processed_transcript MGP_129S1SvImJ_T0048123.1 MGP_129S1SvImJ_G0023870.1 mouse_genomes_project 17 49639078 49646336 + MGP_129S1SvImJ_P0048123 Treml1 protein_coding protein_coding MGP_129S1SvImJ_T0048124.1 MGP_129S1SvImJ_G0023870.1 mouse_genomes_project 17 49639099 49646078 + MGP_129S1SvImJ_P0048124 Treml1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0045924.1 MGP_129S1SvImJ_G0023294.1 mouse_genomes_project 17 23181299 23214140 - MGP_129S1SvImJ_P0045924 Ccnf protein_coding protein_coding MGP_129S1SvImJ_T0048720.1 MGP_129S1SvImJ_G0024085.1 mouse_genomes_project 17 88235217 88281498 + MGP_129S1SvImJ_P0048720 Slc3a1 protein_coding protein_coding MGP_129S1SvImJ_T0045871.1 MGP_129S1SvImJ_G0023283.1 mouse_genomes_project 17 22913644 22916747 - MGP_129S1SvImJ_P0045871 Prss30 protein_coding protein_coding MGP_129S1SvImJ_T0045872.1 MGP_129S1SvImJ_G0023283.1 mouse_genomes_project 17 22914357 22916318 - MGP_129S1SvImJ_P0045872 Prss30 protein_coding protein_coding MGP_129S1SvImJ_T0045873.1 MGP_129S1SvImJ_G0023283.1 mouse_genomes_project 17 22914584 22916691 - Prss30 protein_coding retained_intron MGP_129S1SvImJ_T0045874.1 MGP_129S1SvImJ_G0023283.1 mouse_genomes_project 17 22914608 22916197 - MGP_129S1SvImJ_P0045874 Prss30 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0045875.1 MGP_129S1SvImJ_G0023283.1 mouse_genomes_project 17 22915184 22916715 - MGP_129S1SvImJ_P0045875 Prss30 protein_coding protein_coding MGP_129S1SvImJ_T0045485.1 MGP_129S1SvImJ_G0023131.1 mouse_genomes_project 17 5753014 5766646 + MGP_129S1SvImJ_P0045485 Mpc1 protein_coding protein_coding MGP_129S1SvImJ_T0045486.1 MGP_129S1SvImJ_G0023131.1 mouse_genomes_project 17 5753880 5767879 + MGP_129S1SvImJ_P0045486 Mpc1 protein_coding protein_coding MGP_129S1SvImJ_T0045487.1 MGP_129S1SvImJ_G0023131.1 mouse_genomes_project 17 5753914 5763394 + Mpc1 protein_coding retained_intron MGP_129S1SvImJ_T0045488.1 MGP_129S1SvImJ_G0023131.1 mouse_genomes_project 17 5753914 5767875 + MGP_129S1SvImJ_P0045488 Mpc1 protein_coding protein_coding MGP_129S1SvImJ_T0045489.1 MGP_129S1SvImJ_G0023131.1 mouse_genomes_project 17 5753970 5767489 + MGP_129S1SvImJ_P0045489 Mpc1 protein_coding protein_coding MGP_129S1SvImJ_T0045490.1 MGP_129S1SvImJ_G0023131.1 mouse_genomes_project 17 5754572 5767712 + MGP_129S1SvImJ_P0045490 Mpc1 protein_coding protein_coding MGP_129S1SvImJ_T0045491.1 MGP_129S1SvImJ_G0023131.1 mouse_genomes_project 17 5765868 5766911 + Mpc1 protein_coding retained_intron MGP_129S1SvImJ_T0045492.1 MGP_129S1SvImJ_G0023131.1 mouse_genomes_project 17 5766130 5767667 + MGP_129S1SvImJ_P0045492 Mpc1 protein_coding protein_coding MGP_129S1SvImJ_T0047731.1 MGP_129S1SvImJ_G0023743.1 mouse_genomes_project 17 39201267 39207459 + MGP_129S1SvImJ_P0047731 Esp31 protein_coding protein_coding MGP_129S1SvImJ_T0046030.1 MGP_129S1SvImJ_G0023323.1 mouse_genomes_project 17 23829431 23865513 + MGP_129S1SvImJ_P0046030 Meiob protein_coding protein_coding MGP_129S1SvImJ_T0048701.1 MGP_129S1SvImJ_G0024077.1 mouse_genomes_project 17 87322559 87331906 - MGP_129S1SvImJ_P0048701 Zfp36l2 protein_coding protein_coding MGP_129S1SvImJ_T0006925.1 MGP_129S1SvImJ_G0005707.1 mouse_genomes_project 17 26624275 26626641 + Gm10505 lincRNA lincRNA MGP_129S1SvImJ_T0048317.1 MGP_129S1SvImJ_G0023939.1 mouse_genomes_project 17 58491938 58493897 + Prr22 protein_coding retained_intron MGP_129S1SvImJ_T0048318.1 MGP_129S1SvImJ_G0023939.1 mouse_genomes_project 17 58491964 58493823 + MGP_129S1SvImJ_P0048318 Prr22 protein_coding protein_coding MGP_129S1SvImJ_T0048786.1 MGP_129S1SvImJ_G0024109.1 mouse_genomes_project 17 91936711 91984554 + MGP_129S1SvImJ_P0048786 Foxn2 protein_coding protein_coding MGP_129S1SvImJ_T0048787.1 MGP_129S1SvImJ_G0024109.1 mouse_genomes_project 17 91936737 91954997 + MGP_129S1SvImJ_P0048787 Foxn2 protein_coding protein_coding MGP_129S1SvImJ_T0048788.1 MGP_129S1SvImJ_G0024109.1 mouse_genomes_project 17 91936760 91970882 + Foxn2 protein_coding retained_intron MGP_129S1SvImJ_T0048789.1 MGP_129S1SvImJ_G0024109.1 mouse_genomes_project 17 91936777 91980636 + MGP_129S1SvImJ_P0048789 Foxn2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0047489.1 MGP_129S1SvImJ_G0023654.1 mouse_genomes_project 17 36028576 36032962 - MGP_129S1SvImJ_P0047489 Tubb5 protein_coding protein_coding MGP_129S1SvImJ_T0047490.1 MGP_129S1SvImJ_G0023654.1 mouse_genomes_project 17 36030254 36031710 - Tubb5 protein_coding retained_intron MGP_129S1SvImJ_T0047491.1 MGP_129S1SvImJ_G0023654.1 mouse_genomes_project 17 36030550 36032864 - MGP_129S1SvImJ_P0047491 Tubb5 protein_coding protein_coding MGP_129S1SvImJ_T0047492.1 MGP_129S1SvImJ_G0023654.1 mouse_genomes_project 17 36030896 36032873 - Tubb5 protein_coding retained_intron MGP_129S1SvImJ_T0045878.1 MGP_129S1SvImJ_G0023286.1 mouse_genomes_project 17 22988993 22996659 + MGP_129S1SvImJ_P0045878 Prss27 protein_coding protein_coding MGP_129S1SvImJ_T0003724.1 MGP_129S1SvImJ_G0003365.1 mouse_genomes_project 17 2489584 2518063 + Gm29050 antisense antisense MGP_129S1SvImJ_T0003725.1 MGP_129S1SvImJ_G0003365.1 mouse_genomes_project 17 2504844 2520319 + Gm29050 antisense antisense MGP_129S1SvImJ_T0006922.1 MGP_129S1SvImJ_G0005704.1 mouse_genomes_project 17 26063934 26097326 - Gm17382 lincRNA lincRNA MGP_129S1SvImJ_T0099584.1 MGP_129S1SvImJ_G0037651.1 mouse_genomes_project 17 96956940 96957047 - Gm25935 snRNA snRNA MGP_129S1SvImJ_T0046032.1 MGP_129S1SvImJ_G0023325.1 mouse_genomes_project 17 23876232 23879757 + MGP_129S1SvImJ_P0046032 Hagh protein_coding protein_coding MGP_129S1SvImJ_T0046033.1 MGP_129S1SvImJ_G0023325.1 mouse_genomes_project 17 23876235 23889773 + MGP_129S1SvImJ_P0046033 Hagh protein_coding protein_coding MGP_129S1SvImJ_T0046034.1 MGP_129S1SvImJ_G0023325.1 mouse_genomes_project 17 23876249 23889776 + MGP_129S1SvImJ_P0046034 Hagh protein_coding protein_coding MGP_129S1SvImJ_T0046035.1 MGP_129S1SvImJ_G0023325.1 mouse_genomes_project 17 23876323 23886562 + MGP_129S1SvImJ_P0046035 Hagh protein_coding protein_coding MGP_129S1SvImJ_T0046036.1 MGP_129S1SvImJ_G0023325.1 mouse_genomes_project 17 23883784 23889930 + Hagh protein_coding processed_transcript MGP_129S1SvImJ_T0003793.1 MGP_129S1SvImJ_G0003413.1 mouse_genomes_project 17 48909743 48911769 - Frs3os antisense antisense MGP_129S1SvImJ_T0003794.1 MGP_129S1SvImJ_G0003413.1 mouse_genomes_project 17 48909812 48910602 - Frs3os antisense antisense MGP_129S1SvImJ_T0003795.1 MGP_129S1SvImJ_G0003413.1 mouse_genomes_project 17 48910095 48911752 - Frs3os antisense antisense MGP_129S1SvImJ_T0048747.1 MGP_129S1SvImJ_G0024100.1 mouse_genomes_project 17 90629868 90642127 - MGP_129S1SvImJ_P0048747 Mcfd2 protein_coding protein_coding MGP_129S1SvImJ_T0048748.1 MGP_129S1SvImJ_G0024100.1 mouse_genomes_project 17 90629870 90642096 - MGP_129S1SvImJ_P0048748 Mcfd2 protein_coding protein_coding MGP_129S1SvImJ_T0048749.1 MGP_129S1SvImJ_G0024100.1 mouse_genomes_project 17 90630998 90642072 - MGP_129S1SvImJ_P0048749 Mcfd2 protein_coding protein_coding MGP_129S1SvImJ_T0048750.1 MGP_129S1SvImJ_G0024100.1 mouse_genomes_project 17 90631180 90642087 - MGP_129S1SvImJ_P0048750 Mcfd2 protein_coding protein_coding MGP_129S1SvImJ_T0048751.1 MGP_129S1SvImJ_G0024100.1 mouse_genomes_project 17 90631968 90642066 - MGP_129S1SvImJ_P0048751 Mcfd2 protein_coding protein_coding MGP_129S1SvImJ_T0048752.1 MGP_129S1SvImJ_G0024100.1 mouse_genomes_project 17 90632441 90642072 - MGP_129S1SvImJ_P0048752 Mcfd2 protein_coding protein_coding MGP_129S1SvImJ_T0048753.1 MGP_129S1SvImJ_G0024100.1 mouse_genomes_project 17 90634729 90642055 - Mcfd2 protein_coding processed_transcript MGP_129S1SvImJ_T0048174.1 MGP_129S1SvImJ_G0023882.1 mouse_genomes_project 17 51932284 52126984 + MGP_129S1SvImJ_P0048174 Plcl2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0047997.1 MGP_129S1SvImJ_G0023832.1 mouse_genomes_project 17 47850405 47859840 - MGP_129S1SvImJ_P0047997 Ptcra protein_coding protein_coding MGP_129S1SvImJ_T0045753.1 MGP_129S1SvImJ_G0023238.1 mouse_genomes_project 17 20570069 20599190 - MGP_129S1SvImJ_P0045753 Zfp820 protein_coding protein_coding MGP_129S1SvImJ_T0013299.1 MGP_129S1SvImJ_G0011388.1 mouse_genomes_project 17 70138896 70139834 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0046684.1 MGP_129S1SvImJ_G0023472.1 mouse_genomes_project 17 29236835 29264759 - MGP_129S1SvImJ_P0046684 Ccdc167 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046685.1 MGP_129S1SvImJ_G0023472.1 mouse_genomes_project 17 29245324 29264735 - MGP_129S1SvImJ_P0046685 Ccdc167 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046686.1 MGP_129S1SvImJ_G0023472.1 mouse_genomes_project 17 29246070 29264759 - MGP_129S1SvImJ_P0046686 Ccdc167 protein_coding protein_coding MGP_129S1SvImJ_T0046687.1 MGP_129S1SvImJ_G0023472.1 mouse_genomes_project 17 29247748 29264713 - MGP_129S1SvImJ_P0046687 Ccdc167 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0046688.1 MGP_129S1SvImJ_G0023472.1 mouse_genomes_project 17 29251081 29264762 - MGP_129S1SvImJ_P0046688 Ccdc167 protein_coding protein_coding MGP_129S1SvImJ_T0046689.1 MGP_129S1SvImJ_G0023472.1 mouse_genomes_project 17 29260722 29264714 - Ccdc167 protein_coding processed_transcript MGP_129S1SvImJ_T0047708.1 MGP_129S1SvImJ_G0023726.1 mouse_genomes_project 17 38243154 38248022 + MGP_129S1SvImJ_P0047708 Olfr121 protein_coding protein_coding MGP_129S1SvImJ_T0045984.1 MGP_129S1SvImJ_G0023307.1 mouse_genomes_project 17 23541518 23593397 + MGP_129S1SvImJ_P0045984 Pkd1 protein_coding protein_coding MGP_129S1SvImJ_T0045985.1 MGP_129S1SvImJ_G0023307.1 mouse_genomes_project 17 23541833 23593372 + MGP_129S1SvImJ_P0045985 Pkd1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0046868.1 MGP_129S1SvImJ_G0023522.1 mouse_genomes_project 17 33036949 33041043 - MGP_129S1SvImJ_P0046868 Morc2b protein_coding protein_coding MGP_129S1SvImJ_T0046869.1 MGP_129S1SvImJ_G0023522.1 mouse_genomes_project 17 33037004 33040859 - MGP_129S1SvImJ_P0046869 Morc2b protein_coding protein_coding MGP_129S1SvImJ_T0048217.1 MGP_129S1SvImJ_G0023899.1 mouse_genomes_project 17 57473198 57497479 - MGP_129S1SvImJ_P0048217 Zfp119a protein_coding protein_coding MGP_129S1SvImJ_T0047982.1 MGP_129S1SvImJ_G0023826.1 mouse_genomes_project 17 47754758 47761132 - MGP_129S1SvImJ_P0047982 Klhdc3 protein_coding protein_coding MGP_129S1SvImJ_T0047983.1 MGP_129S1SvImJ_G0023826.1 mouse_genomes_project 17 47754761 47761132 - MGP_129S1SvImJ_P0047983 Klhdc3 protein_coding protein_coding MGP_129S1SvImJ_T0006898.1 MGP_129S1SvImJ_G0005686.1 mouse_genomes_project 17 2945510 2949705 + 3300005D01Rik lincRNA lincRNA MGP_129S1SvImJ_T0006899.1 MGP_129S1SvImJ_G0005686.1 mouse_genomes_project 17 2945552 2949860 + 3300005D01Rik lincRNA lincRNA MGP_129S1SvImJ_T0006900.1 MGP_129S1SvImJ_G0005686.1 mouse_genomes_project 17 2946344 2950052 + 3300005D01Rik lincRNA lincRNA MGP_129S1SvImJ_T0006901.1 MGP_129S1SvImJ_G0005686.1 mouse_genomes_project 17 2946505 2949706 + 3300005D01Rik lincRNA lincRNA MGP_129S1SvImJ_T0006961.1 MGP_129S1SvImJ_G0005736.1 mouse_genomes_project 17 46769001 46819115 + lincRNA lincRNA MGP_129S1SvImJ_T0006962.1 MGP_129S1SvImJ_G0005736.1 mouse_genomes_project 17 46791059 46826460 + lincRNA lincRNA MGP_129S1SvImJ_T0099603.1 MGP_129S1SvImJ_G0037670.1 mouse_genomes_project 18 48553143 48553297 - Gm25440 snRNA snRNA MGP_129S1SvImJ_T0049937.1 MGP_129S1SvImJ_G0024518.1 mouse_genomes_project 18 67096812 67099574 - MGP_129S1SvImJ_P0049937 Mc4r protein_coding protein_coding MGP_129S1SvImJ_T0049631.1 MGP_129S1SvImJ_G0024406.1 mouse_genomes_project 18 45077517 45111799 - MGP_129S1SvImJ_P0049631 Ccdc112 protein_coding protein_coding MGP_129S1SvImJ_T0048951.1 MGP_129S1SvImJ_G0024135.1 mouse_genomes_project 18 4221288 4504540 - MGP_129S1SvImJ_P0048951 Mpp7 protein_coding protein_coding MGP_129S1SvImJ_T0049422.1 MGP_129S1SvImJ_G0024317.1 mouse_genomes_project 18 35752597 35754082 + MGP_129S1SvImJ_P0049422 Pcdhb8 protein_coding protein_coding MGP_129S1SvImJ_T0049423.1 MGP_129S1SvImJ_G0024317.1 mouse_genomes_project 18 35752747 35756077 + MGP_129S1SvImJ_P0049423 Pcdhb8 protein_coding protein_coding MGP_129S1SvImJ_T0100865.1 MGP_129S1SvImJ_G0038932.1 mouse_genomes_project 18 45832975 45833120 - Gm22791 snoRNA snoRNA MGP_129S1SvImJ_T0003848.1 MGP_129S1SvImJ_G0003456.1 mouse_genomes_project 18 64194578 64316404 - St8sia3os antisense antisense MGP_129S1SvImJ_T0003849.1 MGP_129S1SvImJ_G0003456.1 mouse_genomes_project 18 64238309 64316404 - St8sia3os antisense antisense MGP_129S1SvImJ_T0003850.1 MGP_129S1SvImJ_G0003456.1 mouse_genomes_project 18 64308633 64316395 - St8sia3os antisense antisense MGP_129S1SvImJ_T0003851.1 MGP_129S1SvImJ_G0003456.1 mouse_genomes_project 18 64315343 64316381 - St8sia3os antisense antisense MGP_129S1SvImJ_T0049307.1 MGP_129S1SvImJ_G0024267.1 mouse_genomes_project 18 33999369 34033156 - MGP_129S1SvImJ_P0049307 Dnajc18 protein_coding protein_coding MGP_129S1SvImJ_T0098707.1 MGP_129S1SvImJ_G0036792.1 mouse_genomes_project 18 24840574 24840802 - Gm26106 ribozyme ribozyme MGP_129S1SvImJ_T0049317.1 MGP_129S1SvImJ_G0024271.1 mouse_genomes_project 18 34106984 34144309 + MGP_129S1SvImJ_P0049317 Ube2d2a protein_coding protein_coding MGP_129S1SvImJ_T0049318.1 MGP_129S1SvImJ_G0024271.1 mouse_genomes_project 18 34107027 34144300 + MGP_129S1SvImJ_P0049318 Ube2d2a protein_coding protein_coding MGP_129S1SvImJ_T0049134.1 MGP_129S1SvImJ_G0024200.1 mouse_genomes_project 18 22224721 22233538 + MGP_129S1SvImJ_P0049134 2700062C07Rik protein_coding protein_coding MGP_129S1SvImJ_T0099594.1 MGP_129S1SvImJ_G0037661.1 mouse_genomes_project 18 21521904 21522006 - Gm23207 snRNA snRNA MGP_129S1SvImJ_T0100859.1 MGP_129S1SvImJ_G0038926.1 mouse_genomes_project 18 33192024 33192091 - Gm22200 snoRNA snoRNA MGP_129S1SvImJ_T0017645.1 MGP_129S1SvImJ_G0015359.1 mouse_genomes_project 18 33855395 33860341 + Snhg4 processed_transcript lincRNA MGP_129S1SvImJ_T0017646.1 MGP_129S1SvImJ_G0015359.1 mouse_genomes_project 18 33855434 33856789 + Snhg4 processed_transcript retained_intron MGP_129S1SvImJ_T0017647.1 MGP_129S1SvImJ_G0015359.1 mouse_genomes_project 18 33855436 33859255 + Snhg4 processed_transcript retained_intron MGP_129S1SvImJ_T0017648.1 MGP_129S1SvImJ_G0015359.1 mouse_genomes_project 18 33855446 33857989 + Snhg4 processed_transcript retained_intron MGP_129S1SvImJ_T0017649.1 MGP_129S1SvImJ_G0015359.1 mouse_genomes_project 18 33858163 33859421 + Snhg4 processed_transcript retained_intron MGP_129S1SvImJ_T0049583.1 MGP_129S1SvImJ_G0024385.1 mouse_genomes_project 18 42021119 42152822 - MGP_129S1SvImJ_P0049583 Dpysl3 protein_coding protein_coding MGP_129S1SvImJ_T0049584.1 MGP_129S1SvImJ_G0024385.1 mouse_genomes_project 18 42022864 42024174 - Dpysl3 protein_coding processed_transcript MGP_129S1SvImJ_T0049585.1 MGP_129S1SvImJ_G0024385.1 mouse_genomes_project 18 42024370 42074252 - MGP_129S1SvImJ_P0049585 Dpysl3 protein_coding protein_coding MGP_129S1SvImJ_T0049586.1 MGP_129S1SvImJ_G0024385.1 mouse_genomes_project 18 42024431 42097405 - MGP_129S1SvImJ_P0049586 Dpysl3 protein_coding protein_coding MGP_129S1SvImJ_T0049587.1 MGP_129S1SvImJ_G0024385.1 mouse_genomes_project 18 42032252 42043341 - MGP_129S1SvImJ_P0049587 Dpysl3 protein_coding protein_coding MGP_129S1SvImJ_T0049588.1 MGP_129S1SvImJ_G0024385.1 mouse_genomes_project 18 42035450 42042935 - MGP_129S1SvImJ_P0049588 Dpysl3 protein_coding protein_coding MGP_129S1SvImJ_T0099618.1 MGP_129S1SvImJ_G0037685.1 mouse_genomes_project 18 79348510 79348617 + Gm26430 snRNA snRNA MGP_129S1SvImJ_T0050265.1 MGP_129S1SvImJ_G0024614.1 mouse_genomes_project 18 87934368 87941540 + MGP_129S1SvImJ_P0050265 Cbln2 protein_coding protein_coding MGP_129S1SvImJ_T0050266.1 MGP_129S1SvImJ_G0024614.1 mouse_genomes_project 18 87934778 87940849 + MGP_129S1SvImJ_P0050266 Cbln2 protein_coding protein_coding MGP_129S1SvImJ_T0050267.1 MGP_129S1SvImJ_G0024614.1 mouse_genomes_project 18 87935323 87941538 + MGP_129S1SvImJ_P0050267 Cbln2 protein_coding protein_coding MGP_129S1SvImJ_T0050268.1 MGP_129S1SvImJ_G0024614.1 mouse_genomes_project 18 87936306 87941540 + MGP_129S1SvImJ_P0050268 Cbln2 protein_coding protein_coding MGP_129S1SvImJ_T0049266.1 MGP_129S1SvImJ_G0024257.1 mouse_genomes_project 18 33489596 33495605 - MGP_129S1SvImJ_P0049266 Lrrtm2 protein_coding protein_coding MGP_129S1SvImJ_T0100875.1 MGP_129S1SvImJ_G0038942.1 mouse_genomes_project 18 75678505 75678570 + Gm26202 snoRNA snoRNA MGP_129S1SvImJ_T0049666.1 MGP_129S1SvImJ_G0024420.1 mouse_genomes_project 18 48992607 49111185 + MGP_129S1SvImJ_P0049666 Tnfaip8 protein_coding protein_coding MGP_129S1SvImJ_T0049667.1 MGP_129S1SvImJ_G0024420.1 mouse_genomes_project 18 48992671 49069182 + Tnfaip8 protein_coding processed_transcript MGP_129S1SvImJ_T0049668.1 MGP_129S1SvImJ_G0024420.1 mouse_genomes_project 18 48992709 49113413 + MGP_129S1SvImJ_P0049668 Tnfaip8 protein_coding protein_coding MGP_129S1SvImJ_T0049669.1 MGP_129S1SvImJ_G0024420.1 mouse_genomes_project 18 48992715 49127569 + Tnfaip8 protein_coding processed_transcript MGP_129S1SvImJ_T0049670.1 MGP_129S1SvImJ_G0024420.1 mouse_genomes_project 18 49036674 49110978 + MGP_129S1SvImJ_P0049670 Tnfaip8 protein_coding protein_coding MGP_129S1SvImJ_T0049671.1 MGP_129S1SvImJ_G0024420.1 mouse_genomes_project 18 49048193 49111035 + MGP_129S1SvImJ_P0049671 Tnfaip8 protein_coding protein_coding MGP_129S1SvImJ_T0049672.1 MGP_129S1SvImJ_G0024420.1 mouse_genomes_project 18 49048203 49064338 + Tnfaip8 protein_coding processed_transcript MGP_129S1SvImJ_T0049673.1 MGP_129S1SvImJ_G0024420.1 mouse_genomes_project 18 49048204 49110870 + MGP_129S1SvImJ_P0049673 Tnfaip8 protein_coding protein_coding MGP_129S1SvImJ_T0049674.1 MGP_129S1SvImJ_G0024420.1 mouse_genomes_project 18 49064650 49065019 + MGP_129S1SvImJ_P0049674 Tnfaip8 protein_coding protein_coding MGP_129S1SvImJ_T0049675.1 MGP_129S1SvImJ_G0024420.1 mouse_genomes_project 18 49069571 49071298 + Tnfaip8 protein_coding retained_intron MGP_129S1SvImJ_T0049676.1 MGP_129S1SvImJ_G0024420.1 mouse_genomes_project 18 49069579 49110541 + MGP_129S1SvImJ_P0049676 Tnfaip8 protein_coding protein_coding MGP_129S1SvImJ_T0049677.1 MGP_129S1SvImJ_G0024420.1 mouse_genomes_project 18 49069582 49110654 + MGP_129S1SvImJ_P0049677 Tnfaip8 protein_coding protein_coding MGP_129S1SvImJ_T0049678.1 MGP_129S1SvImJ_G0024420.1 mouse_genomes_project 18 49071164 49111966 + MGP_129S1SvImJ_P0049678 Tnfaip8 protein_coding protein_coding MGP_129S1SvImJ_T0100848.1 MGP_129S1SvImJ_G0038915.1 mouse_genomes_project 18 7699581 7699703 + Gm25116 snoRNA snoRNA MGP_129S1SvImJ_T0007048.1 MGP_129S1SvImJ_G0005795.1 mouse_genomes_project 18 62696122 62702373 - 2700046A07Rik lincRNA lincRNA MGP_129S1SvImJ_T0007049.1 MGP_129S1SvImJ_G0005795.1 mouse_genomes_project 18 62700848 62702405 - 2700046A07Rik lincRNA lincRNA MGP_129S1SvImJ_T0003831.1 MGP_129S1SvImJ_G0003443.1 mouse_genomes_project 18 36064584 36065265 - Gm37118 antisense antisense MGP_129S1SvImJ_T0007014.1 MGP_129S1SvImJ_G0005771.1 mouse_genomes_project 18 14217836 14224214 + Gm15328 lincRNA lincRNA MGP_129S1SvImJ_T0049884.1 MGP_129S1SvImJ_G0024503.1 mouse_genomes_project 18 64505331 64539833 - MGP_129S1SvImJ_P0049884 Fech protein_coding protein_coding MGP_129S1SvImJ_T0013357.1 MGP_129S1SvImJ_G0011446.1 mouse_genomes_project 18 51593889 51594787 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0050279.1 MGP_129S1SvImJ_G0024619.1 mouse_genomes_project 18 91871822 91907462 + MGP_129S1SvImJ_P0050279 Tmx3 protein_coding protein_coding MGP_129S1SvImJ_T0049083.1 MGP_129S1SvImJ_G0024183.1 mouse_genomes_project 18 18263321 18324987 - MGP_129S1SvImJ_P0049083 B4galt6 protein_coding protein_coding MGP_129S1SvImJ_T0013341.1 MGP_129S1SvImJ_G0011430.1 mouse_genomes_project 18 30161972 30162130 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049219.1 MGP_129S1SvImJ_G0024238.1 mouse_genomes_project 18 32545296 32575165 - MGP_129S1SvImJ_P0049219 Reep5 protein_coding protein_coding MGP_129S1SvImJ_T0099609.1 MGP_129S1SvImJ_G0037676.1 mouse_genomes_project 18 60997255 60997360 - Gm26403 snRNA snRNA MGP_129S1SvImJ_T0049118.1 MGP_129S1SvImJ_G0024194.1 mouse_genomes_project 18 21666118 21676102 + MGP_129S1SvImJ_P0049118 Zfp397 protein_coding protein_coding MGP_129S1SvImJ_T0013349.1 MGP_129S1SvImJ_G0011438.1 mouse_genomes_project 18 37212670 37213271 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049469.1 MGP_129S1SvImJ_G0024352.1 mouse_genomes_project 18 36232307 36259977 + MGP_129S1SvImJ_P0049469 Pcdhga8 protein_coding protein_coding MGP_129S1SvImJ_T0049470.1 MGP_129S1SvImJ_G0024352.1 mouse_genomes_project 18 36232629 36259977 + MGP_129S1SvImJ_P0049470 Pcdhga8 protein_coding protein_coding MGP_129S1SvImJ_T0049471.1 MGP_129S1SvImJ_G0024352.1 mouse_genomes_project 18 36232684 36235784 + Pcdhga8 protein_coding retained_intron MGP_129S1SvImJ_T0099623.1 MGP_129S1SvImJ_G0037690.1 mouse_genomes_project 18 85903788 85903944 - Gm25005 snRNA snRNA MGP_129S1SvImJ_T0050193.1 MGP_129S1SvImJ_G0024594.1 mouse_genomes_project 18 81163891 81206809 + MGP_129S1SvImJ_P0050193 Pqlc1 protein_coding protein_coding MGP_129S1SvImJ_T0050194.1 MGP_129S1SvImJ_G0024594.1 mouse_genomes_project 18 81163941 81197557 + MGP_129S1SvImJ_P0050194 Pqlc1 protein_coding protein_coding MGP_129S1SvImJ_T0050195.1 MGP_129S1SvImJ_G0024594.1 mouse_genomes_project 18 81168311 81206897 + MGP_129S1SvImJ_P0050195 Pqlc1 protein_coding protein_coding MGP_129S1SvImJ_T0050196.1 MGP_129S1SvImJ_G0024594.1 mouse_genomes_project 18 81168902 81198243 + MGP_129S1SvImJ_P0050196 Pqlc1 protein_coding protein_coding MGP_129S1SvImJ_T0050197.1 MGP_129S1SvImJ_G0024594.1 mouse_genomes_project 18 81169350 81206888 + MGP_129S1SvImJ_P0050197 Pqlc1 protein_coding protein_coding MGP_129S1SvImJ_T0050198.1 MGP_129S1SvImJ_G0024594.1 mouse_genomes_project 18 81169354 81189333 + Pqlc1 protein_coding retained_intron MGP_129S1SvImJ_T0050199.1 MGP_129S1SvImJ_G0024594.1 mouse_genomes_project 18 81169372 81206896 + MGP_129S1SvImJ_P0050199 Pqlc1 protein_coding protein_coding MGP_129S1SvImJ_T0050200.1 MGP_129S1SvImJ_G0024594.1 mouse_genomes_project 18 81169373 81187514 + Pqlc1 protein_coding retained_intron MGP_129S1SvImJ_T0050201.1 MGP_129S1SvImJ_G0024594.1 mouse_genomes_project 18 81169373 81206886 + MGP_129S1SvImJ_P0050201 Pqlc1 protein_coding protein_coding MGP_129S1SvImJ_T0050202.1 MGP_129S1SvImJ_G0024594.1 mouse_genomes_project 18 81169384 81206884 + MGP_129S1SvImJ_P0050202 Pqlc1 protein_coding protein_coding MGP_129S1SvImJ_T0050203.1 MGP_129S1SvImJ_G0024594.1 mouse_genomes_project 18 81176073 81176719 + Pqlc1 protein_coding processed_transcript MGP_129S1SvImJ_T0049418.1 MGP_129S1SvImJ_G0024314.1 mouse_genomes_project 18 35714624 35720367 + MGP_129S1SvImJ_P0049418 Pcdhb5 protein_coding protein_coding MGP_129S1SvImJ_T0003825.1 MGP_129S1SvImJ_G0003437.1 mouse_genomes_project 18 35341661 35342859 - Gm37751 antisense antisense MGP_129S1SvImJ_T0049621.1 MGP_129S1SvImJ_G0024403.1 mouse_genomes_project 18 44023893 44048772 + Kcnn2 protein_coding processed_transcript MGP_129S1SvImJ_T0049622.1 MGP_129S1SvImJ_G0024403.1 mouse_genomes_project 18 44024038 44457366 + MGP_129S1SvImJ_P0049622 Kcnn2 protein_coding protein_coding MGP_129S1SvImJ_T0049623.1 MGP_129S1SvImJ_G0024403.1 mouse_genomes_project 18 44024038 44457507 + MGP_129S1SvImJ_P0049623 Kcnn2 protein_coding protein_coding MGP_129S1SvImJ_T0049624.1 MGP_129S1SvImJ_G0024403.1 mouse_genomes_project 18 44325285 44441545 + Kcnn2 protein_coding retained_intron MGP_129S1SvImJ_T0049625.1 MGP_129S1SvImJ_G0024403.1 mouse_genomes_project 18 44325627 44359771 + Kcnn2 protein_coding retained_intron MGP_129S1SvImJ_T0049626.1 MGP_129S1SvImJ_G0024403.1 mouse_genomes_project 18 44325970 44446850 + Kcnn2 protein_coding processed_transcript MGP_129S1SvImJ_T0049627.1 MGP_129S1SvImJ_G0024403.1 mouse_genomes_project 18 44325970 44457365 + MGP_129S1SvImJ_P0049627 Kcnn2 protein_coding protein_coding MGP_129S1SvImJ_T0011485.1 MGP_129S1SvImJ_G0009601.1 mouse_genomes_project 18 66911736 66912055 + Gm22219 misc_RNA misc_RNA MGP_129S1SvImJ_T0049463.1 MGP_129S1SvImJ_G0024349.1 mouse_genomes_project 18 36162664 36259977 + MGP_129S1SvImJ_P0049463 Pcdhga11 protein_coding protein_coding MGP_129S1SvImJ_T0100849.1 MGP_129S1SvImJ_G0038916.1 mouse_genomes_project 18 13231273 13231402 + Gm24228 snoRNA snoRNA MGP_129S1SvImJ_T0099586.1 MGP_129S1SvImJ_G0037653.1 mouse_genomes_project 18 570861 570925 - Gm23643 snRNA snRNA MGP_129S1SvImJ_T0049839.1 MGP_129S1SvImJ_G0024485.1 mouse_genomes_project 18 61633588 61693782 - MGP_129S1SvImJ_P0049839 Afap1l1 protein_coding protein_coding MGP_129S1SvImJ_T0049840.1 MGP_129S1SvImJ_G0024485.1 mouse_genomes_project 18 61633588 61693691 - MGP_129S1SvImJ_P0049840 Afap1l1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049841.1 MGP_129S1SvImJ_G0024485.1 mouse_genomes_project 18 61634266 61693740 - Afap1l1 protein_coding retained_intron MGP_129S1SvImJ_T0049926.1 MGP_129S1SvImJ_G0024515.1 mouse_genomes_project 18 66171322 66192919 - MGP_129S1SvImJ_P0049926 Lman1 protein_coding protein_coding MGP_129S1SvImJ_T0049927.1 MGP_129S1SvImJ_G0024515.1 mouse_genomes_project 18 66173764 66192903 - MGP_129S1SvImJ_P0049927 Lman1 protein_coding protein_coding MGP_129S1SvImJ_T0049928.1 MGP_129S1SvImJ_G0024515.1 mouse_genomes_project 18 66179311 66185186 - Lman1 protein_coding processed_transcript MGP_129S1SvImJ_T0049929.1 MGP_129S1SvImJ_G0024515.1 mouse_genomes_project 18 66181434 66183943 - Lman1 protein_coding retained_intron MGP_129S1SvImJ_T0049930.1 MGP_129S1SvImJ_G0024515.1 mouse_genomes_project 18 66183420 66214783 - MGP_129S1SvImJ_P0049930 Lman1 protein_coding protein_coding MGP_129S1SvImJ_T0049931.1 MGP_129S1SvImJ_G0024515.1 mouse_genomes_project 18 66183873 66211189 - Lman1 protein_coding processed_transcript MGP_129S1SvImJ_T0099596.1 MGP_129S1SvImJ_G0037663.1 mouse_genomes_project 18 31184741 31184845 - Gm22814 snRNA snRNA MGP_129S1SvImJ_T0049643.1 MGP_129S1SvImJ_G0024414.1 mouse_genomes_project 18 45682359 45740834 + MGP_129S1SvImJ_P0049643 Lvrn protein_coding protein_coding MGP_129S1SvImJ_T0049644.1 MGP_129S1SvImJ_G0024414.1 mouse_genomes_project 18 45682512 45770731 + MGP_129S1SvImJ_P0049644 Lvrn protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049453.1 MGP_129S1SvImJ_G0024342.1 mouse_genomes_project 18 36124366 36259974 + MGP_129S1SvImJ_P0049453 Pcdhgb4 protein_coding protein_coding MGP_129S1SvImJ_T0049454.1 MGP_129S1SvImJ_G0024342.1 mouse_genomes_project 18 36124380 36133351 + Pcdhgb4 protein_coding processed_transcript MGP_129S1SvImJ_T0049914.1 MGP_129S1SvImJ_G0024511.1 mouse_genomes_project 18 65961066 65978388 + MGP_129S1SvImJ_P0049914 Sec11c protein_coding protein_coding MGP_129S1SvImJ_T0049915.1 MGP_129S1SvImJ_G0024511.1 mouse_genomes_project 18 65961067 65978379 + MGP_129S1SvImJ_P0049915 Sec11c protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049916.1 MGP_129S1SvImJ_G0024511.1 mouse_genomes_project 18 65961089 65973451 + MGP_129S1SvImJ_P0049916 Sec11c protein_coding protein_coding MGP_129S1SvImJ_T0049917.1 MGP_129S1SvImJ_G0024511.1 mouse_genomes_project 18 65961120 65978380 + Sec11c protein_coding retained_intron MGP_129S1SvImJ_T0049918.1 MGP_129S1SvImJ_G0024511.1 mouse_genomes_project 18 65961819 65973501 + Sec11c protein_coding processed_transcript MGP_129S1SvImJ_T0049919.1 MGP_129S1SvImJ_G0024511.1 mouse_genomes_project 18 65967314 65978383 + Sec11c protein_coding processed_transcript MGP_129S1SvImJ_T0049920.1 MGP_129S1SvImJ_G0024511.1 mouse_genomes_project 18 65974736 65978383 + Sec11c protein_coding processed_transcript MGP_129S1SvImJ_T0010289.1 MGP_129S1SvImJ_G0008405.1 mouse_genomes_project 18 81860230 81860316 - Gm25071 miRNA miRNA MGP_129S1SvImJ_T0099591.1 MGP_129S1SvImJ_G0037658.1 mouse_genomes_project 18 11934797 11934961 - Gm24924 snRNA snRNA MGP_129S1SvImJ_T0049166.1 MGP_129S1SvImJ_G0024213.1 mouse_genomes_project 18 29685377 29715037 - MGP_129S1SvImJ_P0049166 Slc25a46 protein_coding protein_coding MGP_129S1SvImJ_T0049224.1 MGP_129S1SvImJ_G0024242.1 mouse_genomes_project 18 32772061 32789238 - MGP_129S1SvImJ_P0049224 Nme5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049225.1 MGP_129S1SvImJ_G0024242.1 mouse_genomes_project 18 32772063 32789253 - MGP_129S1SvImJ_P0049225 Nme5 protein_coding protein_coding MGP_129S1SvImJ_T0049226.1 MGP_129S1SvImJ_G0024242.1 mouse_genomes_project 18 32772111 32789225 - MGP_129S1SvImJ_P0049226 Nme5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049227.1 MGP_129S1SvImJ_G0024242.1 mouse_genomes_project 18 32776399 32789221 - MGP_129S1SvImJ_P0049227 Nme5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0013351.1 MGP_129S1SvImJ_G0011440.1 mouse_genomes_project 18 37875283 37875634 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099624.1 MGP_129S1SvImJ_G0037691.1 mouse_genomes_project 18 87552687 87552794 + Gm25453 snRNA snRNA MGP_129S1SvImJ_T0010284.1 MGP_129S1SvImJ_G0008400.1 mouse_genomes_project 18 69102985 69103087 + Mir6356 miRNA miRNA MGP_129S1SvImJ_T0050174.1 MGP_129S1SvImJ_G0024586.1 mouse_genomes_project 18 79579100 79953920 - MGP_129S1SvImJ_P0050174 Setbp1 protein_coding protein_coding MGP_129S1SvImJ_T0010260.1 MGP_129S1SvImJ_G0008376.1 mouse_genomes_project 18 34313972 34314056 + Gm23882 miRNA miRNA MGP_129S1SvImJ_T0050038.1 MGP_129S1SvImJ_G0024541.1 mouse_genomes_project 18 70708049 70712803 - MGP_129S1SvImJ_P0050038 Dynap protein_coding protein_coding MGP_129S1SvImJ_T0050180.1 MGP_129S1SvImJ_G0024592.1 mouse_genomes_project 18 81114018 81132307 + MGP_129S1SvImJ_P0050180 Txnl4a protein_coding protein_coding MGP_129S1SvImJ_T0050184.1 MGP_129S1SvImJ_G0024592.1 mouse_genomes_project 18 81114086 81130948 + MGP_129S1SvImJ_P0050184 Txnl4a protein_coding protein_coding MGP_129S1SvImJ_T0050186.1 MGP_129S1SvImJ_G0024592.1 mouse_genomes_project 18 81114117 81127334 + Txnl4a protein_coding retained_intron MGP_129S1SvImJ_T0050191.1 MGP_129S1SvImJ_G0024592.1 mouse_genomes_project 18 81124343 81131084 + Txnl4a protein_coding processed_transcript MGP_129S1SvImJ_T0050275.1 MGP_129S1SvImJ_G0024617.1 mouse_genomes_project 18 90548694 90624119 + MGP_129S1SvImJ_P0050275 Cd226 protein_coding protein_coding MGP_129S1SvImJ_T0050276.1 MGP_129S1SvImJ_G0024617.1 mouse_genomes_project 18 90548761 90621501 + MGP_129S1SvImJ_P0050276 Cd226 protein_coding protein_coding MGP_129S1SvImJ_T0010259.1 MGP_129S1SvImJ_G0008375.1 mouse_genomes_project 18 33859156 33859267 + miRNA miRNA MGP_129S1SvImJ_T0010254.1 MGP_129S1SvImJ_G0008370.1 mouse_genomes_project 18 8969083 8969161 - Mir1901 miRNA miRNA MGP_129S1SvImJ_T0049119.1 MGP_129S1SvImJ_G0024195.1 mouse_genomes_project 18 21685570 21694058 - MGP_129S1SvImJ_P0049119 Zscan30 protein_coding protein_coding MGP_129S1SvImJ_T0049764.1 MGP_129S1SvImJ_G0024462.1 mouse_genomes_project 18 60340935 60370421 + MGP_129S1SvImJ_P0049764 Dctn4 protein_coding protein_coding MGP_129S1SvImJ_T0049765.1 MGP_129S1SvImJ_G0024462.1 mouse_genomes_project 18 60340945 60370424 + MGP_129S1SvImJ_P0049765 Dctn4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0099625.1 MGP_129S1SvImJ_G0037692.1 mouse_genomes_project 18 91589487 91589551 + Gm23859 snRNA snRNA MGP_129S1SvImJ_T0049882.1 MGP_129S1SvImJ_G0024502.1 mouse_genomes_project 18 64384998 64446302 + MGP_129S1SvImJ_P0049882 Onecut2 protein_coding protein_coding MGP_129S1SvImJ_T0049883.1 MGP_129S1SvImJ_G0024502.1 mouse_genomes_project 18 64384998 64446304 + MGP_129S1SvImJ_P0049883 Onecut2 protein_coding protein_coding MGP_129S1SvImJ_T0049250.1 MGP_129S1SvImJ_G0024248.1 mouse_genomes_project 18 32967146 32986076 - MGP_129S1SvImJ_P0049250 Cdc25c protein_coding protein_coding MGP_129S1SvImJ_T0011465.1 MGP_129S1SvImJ_G0009581.1 mouse_genomes_project 18 10184073 10184380 + Gm26407 misc_RNA misc_RNA MGP_129S1SvImJ_T0048971.1 MGP_129S1SvImJ_G0024144.1 mouse_genomes_project 18 6881619 6924797 + MGP_129S1SvImJ_P0048971 Thoc1 protein_coding protein_coding MGP_129S1SvImJ_T0049154.1 MGP_129S1SvImJ_G0024209.1 mouse_genomes_project 18 23302224 23587308 - MGP_129S1SvImJ_P0049154 Celf4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049155.1 MGP_129S1SvImJ_G0024209.1 mouse_genomes_project 18 23302237 23587764 - MGP_129S1SvImJ_P0049155 Celf4 protein_coding protein_coding MGP_129S1SvImJ_T0049156.1 MGP_129S1SvImJ_G0024209.1 mouse_genomes_project 18 23302237 23587764 - MGP_129S1SvImJ_P0049156 Celf4 protein_coding protein_coding MGP_129S1SvImJ_T0049194.1 MGP_129S1SvImJ_G0024232.1 mouse_genomes_project 18 31366448 31381181 - MGP_129S1SvImJ_P0049194 Stard4 protein_coding protein_coding MGP_129S1SvImJ_T0049195.1 MGP_129S1SvImJ_G0024232.1 mouse_genomes_project 18 31370494 31381085 - MGP_129S1SvImJ_P0049195 Stard4 protein_coding protein_coding MGP_129S1SvImJ_T0049196.1 MGP_129S1SvImJ_G0024232.1 mouse_genomes_project 18 31370688 31381091 - MGP_129S1SvImJ_P0049196 Stard4 protein_coding protein_coding MGP_129S1SvImJ_T0049197.1 MGP_129S1SvImJ_G0024232.1 mouse_genomes_project 18 31371986 31381140 - Stard4 protein_coding retained_intron MGP_129S1SvImJ_T0100871.1 MGP_129S1SvImJ_G0038938.1 mouse_genomes_project 18 67753638 67753772 + Gm24900 snoRNA snoRNA MGP_129S1SvImJ_T0100854.1 MGP_129S1SvImJ_G0038921.1 mouse_genomes_project 18 28530334 28530446 + Gm22870 snoRNA snoRNA MGP_129S1SvImJ_T0049485.1 MGP_129S1SvImJ_G0024355.1 mouse_genomes_project 18 36357596 36368244 - Hdac3 protein_coding retained_intron MGP_129S1SvImJ_T0049486.1 MGP_129S1SvImJ_G0024355.1 mouse_genomes_project 18 36358724 36366759 - Hdac3 protein_coding retained_intron MGP_129S1SvImJ_T0049487.1 MGP_129S1SvImJ_G0024355.1 mouse_genomes_project 18 36358724 36377656 - MGP_129S1SvImJ_P0049487 Hdac3 protein_coding protein_coding MGP_129S1SvImJ_T0049488.1 MGP_129S1SvImJ_G0024355.1 mouse_genomes_project 18 36358730 36377599 - Hdac3 protein_coding processed_transcript MGP_129S1SvImJ_T0050066.1 MGP_129S1SvImJ_G0024551.1 mouse_genomes_project 18 74456729 74478868 + MGP_129S1SvImJ_P0050066 Mro protein_coding protein_coding MGP_129S1SvImJ_T0050067.1 MGP_129S1SvImJ_G0024551.1 mouse_genomes_project 18 74456731 74479282 + MGP_129S1SvImJ_P0050067 Mro protein_coding protein_coding MGP_129S1SvImJ_T0050068.1 MGP_129S1SvImJ_G0024551.1 mouse_genomes_project 18 74456738 74481481 + Mro protein_coding processed_transcript MGP_129S1SvImJ_T0050069.1 MGP_129S1SvImJ_G0024551.1 mouse_genomes_project 18 74456746 74478868 + MGP_129S1SvImJ_P0050069 Mro protein_coding protein_coding MGP_129S1SvImJ_T0050070.1 MGP_129S1SvImJ_G0024551.1 mouse_genomes_project 18 74462370 74468915 + Mro protein_coding retained_intron MGP_129S1SvImJ_T0050071.1 MGP_129S1SvImJ_G0024551.1 mouse_genomes_project 18 74462411 74470622 + MGP_129S1SvImJ_P0050071 Mro protein_coding protein_coding MGP_129S1SvImJ_T0050039.1 MGP_129S1SvImJ_G0024542.1 mouse_genomes_project 18 70930516 70951191 - MGP_129S1SvImJ_P0050039 4930503L19Rik protein_coding protein_coding MGP_129S1SvImJ_T0049185.1 MGP_129S1SvImJ_G0024227.1 mouse_genomes_project 18 30520313 30583795 + MGP_129S1SvImJ_P0049185 Bin1 protein_coding protein_coding MGP_129S1SvImJ_T0049186.1 MGP_129S1SvImJ_G0024227.1 mouse_genomes_project 18 30520313 30583795 + MGP_129S1SvImJ_P0049186 Bin1 protein_coding protein_coding MGP_129S1SvImJ_T0050178.1 MGP_129S1SvImJ_G0024590.1 mouse_genomes_project 18 81099741 81108158 - MGP_129S1SvImJ_P0050178 Rbfa protein_coding protein_coding MGP_129S1SvImJ_T0003855.1 MGP_129S1SvImJ_G0003459.1 mouse_genomes_project 18 75166048 75173439 - 1700120E14Rik antisense antisense MGP_129S1SvImJ_T0003856.1 MGP_129S1SvImJ_G0003459.1 mouse_genomes_project 18 75166161 75173421 - 1700120E14Rik antisense antisense MGP_129S1SvImJ_T0049447.1 MGP_129S1SvImJ_G0024338.1 mouse_genomes_project 18 36091742 36259977 + MGP_129S1SvImJ_P0049447 Pcdhgb2 protein_coding protein_coding MGP_129S1SvImJ_T0049448.1 MGP_129S1SvImJ_G0024338.1 mouse_genomes_project 18 36091749 36095877 + Pcdhgb2 protein_coding retained_intron MGP_129S1SvImJ_T0049124.1 MGP_129S1SvImJ_G0024198.1 mouse_genomes_project 18 21823418 21842296 - MGP_129S1SvImJ_P0049124 Ino80c protein_coding protein_coding MGP_129S1SvImJ_T0049125.1 MGP_129S1SvImJ_G0024198.1 mouse_genomes_project 18 21823424 21842448 - MGP_129S1SvImJ_P0049125 Ino80c protein_coding protein_coding MGP_129S1SvImJ_T0049126.1 MGP_129S1SvImJ_G0024198.1 mouse_genomes_project 18 21825041 21842330 - MGP_129S1SvImJ_P0049126 Ino80c protein_coding protein_coding MGP_129S1SvImJ_T0017662.1 MGP_129S1SvImJ_G0015363.1 mouse_genomes_project 18 36643410 36663548 + 2010320O07Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0049844.1 MGP_129S1SvImJ_G0024487.1 mouse_genomes_project 18 61878606 61943638 + MGP_129S1SvImJ_P0049844 Sh3tc2 protein_coding protein_coding MGP_129S1SvImJ_T0049958.1 MGP_129S1SvImJ_G0024532.1 mouse_genomes_project 18 68345521 68600440 + MGP_129S1SvImJ_P0049958 Ldlrad4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0099611.1 MGP_129S1SvImJ_G0037678.1 mouse_genomes_project 18 63511102 63511165 + Gm23581 snRNA snRNA MGP_129S1SvImJ_T0050079.1 MGP_129S1SvImJ_G0024556.1 mouse_genomes_project 18 74886061 74895941 + MGP_129S1SvImJ_P0050079 Mbd1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0050080.1 MGP_129S1SvImJ_G0024556.1 mouse_genomes_project 18 74886630 74901071 + MGP_129S1SvImJ_P0050080 Mbd1 protein_coding protein_coding MGP_129S1SvImJ_T0098548.1 MGP_129S1SvImJ_G0036633.1 mouse_genomes_project 18 75700577 75700669 + Gm27781 rRNA rRNA MGP_129S1SvImJ_T0010277.1 MGP_129S1SvImJ_G0008393.1 mouse_genomes_project 18 61281230 61281343 + Gm25301 miRNA miRNA MGP_129S1SvImJ_T0049127.1 MGP_129S1SvImJ_G0024199.1 mouse_genomes_project 18 21937194 22022743 + MGP_129S1SvImJ_P0049127 Galnt1 protein_coding protein_coding MGP_129S1SvImJ_T0049128.1 MGP_129S1SvImJ_G0024199.1 mouse_genomes_project 18 21937657 22022735 + MGP_129S1SvImJ_P0049128 Galnt1 protein_coding protein_coding MGP_129S1SvImJ_T0049129.1 MGP_129S1SvImJ_G0024199.1 mouse_genomes_project 18 21939846 21988885 + MGP_129S1SvImJ_P0049129 Galnt1 protein_coding protein_coding MGP_129S1SvImJ_T0049130.1 MGP_129S1SvImJ_G0024199.1 mouse_genomes_project 18 21966367 22022735 + MGP_129S1SvImJ_P0049130 Galnt1 protein_coding protein_coding MGP_129S1SvImJ_T0049131.1 MGP_129S1SvImJ_G0024199.1 mouse_genomes_project 18 21971933 22002399 + MGP_129S1SvImJ_P0049131 Galnt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049132.1 MGP_129S1SvImJ_G0024199.1 mouse_genomes_project 18 21979313 22006401 + MGP_129S1SvImJ_P0049132 Galnt1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049133.1 MGP_129S1SvImJ_G0024199.1 mouse_genomes_project 18 22014726 22018688 + Galnt1 protein_coding processed_transcript MGP_129S1SvImJ_T0011479.1 MGP_129S1SvImJ_G0009595.1 mouse_genomes_project 18 41215343 41215499 + Gm27457 misc_RNA misc_RNA MGP_129S1SvImJ_T0003845.1 MGP_129S1SvImJ_G0003455.1 mouse_genomes_project 18 61629713 61631578 + 1500015A07Rik antisense antisense MGP_129S1SvImJ_T0003846.1 MGP_129S1SvImJ_G0003455.1 mouse_genomes_project 18 61629756 61640498 + 1500015A07Rik antisense antisense MGP_129S1SvImJ_T0003847.1 MGP_129S1SvImJ_G0003455.1 mouse_genomes_project 18 61638936 61640490 + 1500015A07Rik antisense antisense MGP_129S1SvImJ_T0050280.1 MGP_129S1SvImJ_G0024620.1 mouse_genomes_project 18 91945038 91957676 + MGP_129S1SvImJ_P0050280 unknown_likely_coding unknown_likely_coding MGP_129S1SvImJ_T0049414.1 MGP_129S1SvImJ_G0024311.1 mouse_genomes_project 18 35689147 35691961 + MGP_129S1SvImJ_P0049414 Pcdhb2 protein_coding protein_coding MGP_129S1SvImJ_T0049415.1 MGP_129S1SvImJ_G0024311.1 mouse_genomes_project 18 35689175 35690757 + MGP_129S1SvImJ_P0049415 Pcdhb2 protein_coding protein_coding MGP_129S1SvImJ_T0049066.1 MGP_129S1SvImJ_G0024174.1 mouse_genomes_project 18 13983124 14210687 - MGP_129S1SvImJ_P0049066 Cdh2 protein_coding protein_coding MGP_129S1SvImJ_T0049067.1 MGP_129S1SvImJ_G0024174.1 mouse_genomes_project 18 13983270 14070451 - MGP_129S1SvImJ_P0049067 Cdh2 protein_coding protein_coding MGP_129S1SvImJ_T0049068.1 MGP_129S1SvImJ_G0024174.1 mouse_genomes_project 18 14170973 14208724 - Cdh2 protein_coding retained_intron MGP_129S1SvImJ_T0049064.1 MGP_129S1SvImJ_G0024173.1 mouse_genomes_project 18 12784187 13057700 - MGP_129S1SvImJ_P0049064 Chst9 protein_coding protein_coding MGP_129S1SvImJ_T0049065.1 MGP_129S1SvImJ_G0024173.1 mouse_genomes_project 18 12784187 13103987 - MGP_129S1SvImJ_P0049065 Chst9 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049417.1 MGP_129S1SvImJ_G0024313.1 mouse_genomes_project 18 35701695 35705411 + MGP_129S1SvImJ_P0049417 Pcdhb4 protein_coding protein_coding MGP_129S1SvImJ_T0049181.1 MGP_129S1SvImJ_G0024225.1 mouse_genomes_project 18 30291368 30368964 + MGP_129S1SvImJ_P0049181 Map3k2 protein_coding protein_coding MGP_129S1SvImJ_T0003830.1 MGP_129S1SvImJ_G0003442.1 mouse_genomes_project 18 35826199 35830343 - Gm37446 antisense antisense MGP_129S1SvImJ_T0049506.1 MGP_129S1SvImJ_G0024358.1 mouse_genomes_project 18 36395291 36421442 - MGP_129S1SvImJ_P0049506 Arap3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049396.1 MGP_129S1SvImJ_G0024299.1 mouse_genomes_project 18 35373734 35583235 + MGP_129S1SvImJ_P0049396 Pcdha5 protein_coding protein_coding MGP_129S1SvImJ_T0049440.1 MGP_129S1SvImJ_G0024333.1 mouse_genomes_project 18 36064425 36259977 + MGP_129S1SvImJ_P0049440 Pcdhga1 protein_coding protein_coding MGP_129S1SvImJ_T0049441.1 MGP_129S1SvImJ_G0024333.1 mouse_genomes_project 18 36064425 36067672 + MGP_129S1SvImJ_P0049441 Pcdhga1 protein_coding protein_coding MGP_129S1SvImJ_T0100856.1 MGP_129S1SvImJ_G0038923.1 mouse_genomes_project 18 30790053 30790190 - Gm25826 snoRNA snoRNA MGP_129S1SvImJ_T0007058.1 MGP_129S1SvImJ_G0005804.1 mouse_genomes_project 18 83801998 83806535 - 2210420H20Rik lincRNA lincRNA MGP_129S1SvImJ_T0050176.1 MGP_129S1SvImJ_G0024588.1 mouse_genomes_project 18 80983953 80985030 - MGP_129S1SvImJ_P0050176 protein_coding protein_coding MGP_129S1SvImJ_T0049514.1 MGP_129S1SvImJ_G0024361.1 mouse_genomes_project 18 36707471 36719009 - Pcdh12 protein_coding retained_intron MGP_129S1SvImJ_T0049515.1 MGP_129S1SvImJ_G0024361.1 mouse_genomes_project 18 36709207 36725118 - MGP_129S1SvImJ_P0049515 Pcdh12 protein_coding protein_coding MGP_129S1SvImJ_T0049516.1 MGP_129S1SvImJ_G0024361.1 mouse_genomes_project 18 36721802 36725447 - Pcdh12 protein_coding retained_intron MGP_129S1SvImJ_T0050274.1 MGP_129S1SvImJ_G0024616.1 mouse_genomes_project 18 90315311 90491891 + MGP_129S1SvImJ_P0050274 Rttn protein_coding protein_coding MGP_129S1SvImJ_T0050146.1 MGP_129S1SvImJ_G0024575.1 mouse_genomes_project 18 78029930 78209517 + MGP_129S1SvImJ_P0050146 Loxhd1 protein_coding protein_coding MGP_129S1SvImJ_T0050147.1 MGP_129S1SvImJ_G0024575.1 mouse_genomes_project 18 78058420 78143280 + MGP_129S1SvImJ_P0050147 Loxhd1 protein_coding protein_coding MGP_129S1SvImJ_T0050148.1 MGP_129S1SvImJ_G0024575.1 mouse_genomes_project 18 78088031 78171730 + MGP_129S1SvImJ_P0050148 Loxhd1 protein_coding protein_coding MGP_129S1SvImJ_T0050149.1 MGP_129S1SvImJ_G0024575.1 mouse_genomes_project 18 78136033 78209601 + MGP_129S1SvImJ_P0050149 Loxhd1 protein_coding protein_coding MGP_129S1SvImJ_T0050150.1 MGP_129S1SvImJ_G0024575.1 mouse_genomes_project 18 78169745 78209146 + MGP_129S1SvImJ_P0050150 Loxhd1 protein_coding protein_coding MGP_129S1SvImJ_T0049305.1 MGP_129S1SvImJ_G0024266.1 mouse_genomes_project 18 33977059 33985648 - MGP_129S1SvImJ_P0049305 Spata24 protein_coding protein_coding MGP_129S1SvImJ_T0049306.1 MGP_129S1SvImJ_G0024266.1 mouse_genomes_project 18 33983478 33985648 - MGP_129S1SvImJ_P0049306 Spata24 protein_coding protein_coding MGP_129S1SvImJ_T0013345.1 MGP_129S1SvImJ_G0011434.1 mouse_genomes_project 18 35326529 35329071 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049679.1 MGP_129S1SvImJ_G0024421.1 mouse_genomes_project 18 49150419 49224731 + MGP_129S1SvImJ_P0049679 Hsd17b4 protein_coding protein_coding MGP_129S1SvImJ_T0049680.1 MGP_129S1SvImJ_G0024421.1 mouse_genomes_project 18 49150712 49165490 + Hsd17b4 protein_coding processed_transcript MGP_129S1SvImJ_T0049681.1 MGP_129S1SvImJ_G0024421.1 mouse_genomes_project 18 49165246 49170487 + Hsd17b4 protein_coding retained_intron MGP_129S1SvImJ_T0049682.1 MGP_129S1SvImJ_G0024421.1 mouse_genomes_project 18 49219785 49224434 + Hsd17b4 protein_coding retained_intron MGP_129S1SvImJ_T0099040.1 MGP_129S1SvImJ_G0037109.1 mouse_genomes_project 18 81916774 81926473 - Gm27238 sense_overlapping sense_overlapping MGP_129S1SvImJ_T0010261.1 MGP_129S1SvImJ_G0008377.1 mouse_genomes_project 18 35227895 35228005 + Gm23424 miRNA miRNA MGP_129S1SvImJ_T0049222.1 MGP_129S1SvImJ_G0024240.1 mouse_genomes_project 18 32648451 32716823 - MGP_129S1SvImJ_P0049222 Fam13b protein_coding protein_coding MGP_129S1SvImJ_T0050040.1 MGP_129S1SvImJ_G0024543.1 mouse_genomes_project 18 70951739 70961421 + MGP_129S1SvImJ_P0050040 Stard6 protein_coding protein_coding MGP_129S1SvImJ_T0050041.1 MGP_129S1SvImJ_G0024543.1 mouse_genomes_project 18 70951871 70975770 + MGP_129S1SvImJ_P0050041 Stard6 protein_coding protein_coding MGP_129S1SvImJ_T0050042.1 MGP_129S1SvImJ_G0024543.1 mouse_genomes_project 18 70951922 70973783 + MGP_129S1SvImJ_P0050042 Stard6 protein_coding protein_coding MGP_129S1SvImJ_T0050057.1 MGP_129S1SvImJ_G0024548.1 mouse_genomes_project 18 74223203 74286819 - MGP_129S1SvImJ_P0050057 Smad4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0050058.1 MGP_129S1SvImJ_G0024548.1 mouse_genomes_project 18 74227426 74290384 - MGP_129S1SvImJ_P0050058 Smad4 protein_coding protein_coding MGP_129S1SvImJ_T0050059.1 MGP_129S1SvImJ_G0024548.1 mouse_genomes_project 18 74228417 74270374 - MGP_129S1SvImJ_P0050059 Smad4 protein_coding protein_coding MGP_129S1SvImJ_T0050060.1 MGP_129S1SvImJ_G0024548.1 mouse_genomes_project 18 74228574 74230980 - Smad4 protein_coding processed_transcript MGP_129S1SvImJ_T0050061.1 MGP_129S1SvImJ_G0024548.1 mouse_genomes_project 18 74228628 74238234 - Smad4 protein_coding processed_transcript MGP_129S1SvImJ_T0050062.1 MGP_129S1SvImJ_G0024548.1 mouse_genomes_project 18 74228639 74253872 - Smad4 protein_coding processed_transcript MGP_129S1SvImJ_T0050063.1 MGP_129S1SvImJ_G0024548.1 mouse_genomes_project 18 74249875 74267261 - Smad4 protein_coding processed_transcript MGP_129S1SvImJ_T0010268.1 MGP_129S1SvImJ_G0008384.1 mouse_genomes_project 18 55570760 55570945 + Gm25476 miRNA miRNA MGP_129S1SvImJ_T0001037.1 MGP_129S1SvImJ_G0000966.1 mouse_genomes_project 18 81288762 81291808 + TEC TEC MGP_129S1SvImJ_T0049439.1 MGP_129S1SvImJ_G0024332.1 mouse_genomes_project 18 36043125 36046838 - MGP_129S1SvImJ_P0049439 Taf7 protein_coding protein_coding MGP_129S1SvImJ_T0049595.1 MGP_129S1SvImJ_G0024390.1 mouse_genomes_project 18 42696807 42758980 + MGP_129S1SvImJ_P0049595 Spink5 protein_coding protein_coding MGP_129S1SvImJ_T0049596.1 MGP_129S1SvImJ_G0024390.1 mouse_genomes_project 18 42699932 42726201 + MGP_129S1SvImJ_P0049596 Spink5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0013358.1 MGP_129S1SvImJ_G0011447.1 mouse_genomes_project 18 55038910 55039888 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0050105.1 MGP_129S1SvImJ_G0024565.1 mouse_genomes_project 18 76137738 76410064 - MGP_129S1SvImJ_P0050105 Ctif protein_coding protein_coding MGP_129S1SvImJ_T0049607.1 MGP_129S1SvImJ_G0024398.1 mouse_genomes_project 18 43008160 43015987 + MGP_129S1SvImJ_P0049607 Npy6r protein_coding protein_coding MGP_129S1SvImJ_T0049688.1 MGP_129S1SvImJ_G0024427.1 mouse_genomes_project 18 51584716 51611765 + MGP_129S1SvImJ_P0049688 Srfbp1 protein_coding protein_coding MGP_129S1SvImJ_T0011490.1 MGP_129S1SvImJ_G0009606.1 mouse_genomes_project 18 85986157 85986456 + Gm22819 misc_RNA misc_RNA MGP_129S1SvImJ_T0049001.1 MGP_129S1SvImJ_G0024152.1 mouse_genomes_project 18 8011018 8055645 + MGP_129S1SvImJ_P0049001 Gata6 protein_coding protein_coding MGP_129S1SvImJ_T0013336.1 MGP_129S1SvImJ_G0011425.1 mouse_genomes_project 18 21991632 21993111 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049956.1 MGP_129S1SvImJ_G0024531.1 mouse_genomes_project 18 68126730 68217112 + MGP_129S1SvImJ_P0049956 Cep192 protein_coding protein_coding MGP_129S1SvImJ_T0049957.1 MGP_129S1SvImJ_G0024531.1 mouse_genomes_project 18 68129406 68217118 + MGP_129S1SvImJ_P0049957 Cep192 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0050098.1 MGP_129S1SvImJ_G0024562.1 mouse_genomes_project 18 75682536 75686594 + MGP_129S1SvImJ_P0050098 BC031181 protein_coding protein_coding MGP_129S1SvImJ_T0003839.1 MGP_129S1SvImJ_G0003451.1 mouse_genomes_project 18 43416454 43430975 + A930012L18Rik antisense antisense MGP_129S1SvImJ_T0003840.1 MGP_129S1SvImJ_G0003451.1 mouse_genomes_project 18 43416892 43427283 + A930012L18Rik antisense antisense MGP_129S1SvImJ_T0050262.1 MGP_129S1SvImJ_G0024612.1 mouse_genomes_project 18 86118035 86122256 - MGP_129S1SvImJ_P0050262 Timm21 protein_coding protein_coding MGP_129S1SvImJ_T0049890.1 MGP_129S1SvImJ_G0024507.1 mouse_genomes_project 18 65386578 65531567 - MGP_129S1SvImJ_P0049890 Alpk2 protein_coding protein_coding MGP_129S1SvImJ_T0049891.1 MGP_129S1SvImJ_G0024507.1 mouse_genomes_project 18 65398140 65482200 - MGP_129S1SvImJ_P0049891 Alpk2 protein_coding protein_coding MGP_129S1SvImJ_T0049892.1 MGP_129S1SvImJ_G0024507.1 mouse_genomes_project 18 65495631 65531568 - Alpk2 protein_coding processed_transcript MGP_129S1SvImJ_T0099595.1 MGP_129S1SvImJ_G0037662.1 mouse_genomes_project 18 30987285 30987392 + Gm26378 snRNA snRNA MGP_129S1SvImJ_T0050030.1 MGP_129S1SvImJ_G0024539.1 mouse_genomes_project 18 70374522 70396143 + Ccdc68 protein_coding processed_transcript MGP_129S1SvImJ_T0050031.1 MGP_129S1SvImJ_G0024539.1 mouse_genomes_project 18 70374562 70420981 + MGP_129S1SvImJ_P0050031 Ccdc68 protein_coding protein_coding MGP_129S1SvImJ_T0050032.1 MGP_129S1SvImJ_G0024539.1 mouse_genomes_project 18 70374666 70391054 + Ccdc68 protein_coding processed_transcript MGP_129S1SvImJ_T0050033.1 MGP_129S1SvImJ_G0024539.1 mouse_genomes_project 18 70374672 70420981 + MGP_129S1SvImJ_P0050033 Ccdc68 protein_coding protein_coding MGP_129S1SvImJ_T0049640.1 MGP_129S1SvImJ_G0024412.1 mouse_genomes_project 18 45554568 45563721 - MGP_129S1SvImJ_P0049640 Atg12 protein_coding protein_coding MGP_129S1SvImJ_T0013337.1 MGP_129S1SvImJ_G0011426.1 mouse_genomes_project 18 23210023 23210555 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049950.1 MGP_129S1SvImJ_G0024528.1 mouse_genomes_project 18 67949130 67961678 + MGP_129S1SvImJ_P0049950 Psmg2 protein_coding protein_coding MGP_129S1SvImJ_T0049182.1 MGP_129S1SvImJ_G0024226.1 mouse_genomes_project 18 30372511 30404114 + MGP_129S1SvImJ_P0049182 Ercc3 protein_coding protein_coding MGP_129S1SvImJ_T0049183.1 MGP_129S1SvImJ_G0024226.1 mouse_genomes_project 18 30372565 30404114 + Ercc3 protein_coding retained_intron MGP_129S1SvImJ_T0049184.1 MGP_129S1SvImJ_G0024226.1 mouse_genomes_project 18 30391234 30404054 + Ercc3 protein_coding processed_transcript MGP_129S1SvImJ_T0013352.1 MGP_129S1SvImJ_G0011441.1 mouse_genomes_project 18 39316241 39316682 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003818.1 MGP_129S1SvImJ_G0003433.1 mouse_genomes_project 18 14126498 14127445 + Gm15485 antisense antisense MGP_129S1SvImJ_T0098338.1 MGP_129S1SvImJ_G0036423.1 mouse_genomes_project 18 60234432 60235075 + pseudogene pseudogene MGP_129S1SvImJ_T0007019.1 MGP_129S1SvImJ_G0005773.1 mouse_genomes_project 18 29536752 29545516 + Gm26658 lincRNA lincRNA MGP_129S1SvImJ_T0049171.1 MGP_129S1SvImJ_G0024217.1 mouse_genomes_project 18 29906173 29913669 + MGP_129S1SvImJ_P0049171 Polr2d protein_coding protein_coding MGP_129S1SvImJ_T0049563.1 MGP_129S1SvImJ_G0024375.1 mouse_genomes_project 18 40657546 40775744 + MGP_129S1SvImJ_P0049563 Sh3rf2 protein_coding protein_coding MGP_129S1SvImJ_T0049564.1 MGP_129S1SvImJ_G0024375.1 mouse_genomes_project 18 40657589 40775235 + MGP_129S1SvImJ_P0049564 Sh3rf2 protein_coding protein_coding MGP_129S1SvImJ_T0049565.1 MGP_129S1SvImJ_G0024375.1 mouse_genomes_project 18 40758653 40772911 + Sh3rf2 protein_coding processed_transcript MGP_129S1SvImJ_T0049566.1 MGP_129S1SvImJ_G0024375.1 mouse_genomes_project 18 40758741 40769926 + Sh3rf2 protein_coding processed_transcript MGP_129S1SvImJ_T0010265.1 MGP_129S1SvImJ_G0008381.1 mouse_genomes_project 18 39942702 39942793 - Gm44476 miRNA miRNA MGP_129S1SvImJ_T0049180.1 MGP_129S1SvImJ_G0024224.1 mouse_genomes_project 18 30247715 30267275 - MGP_129S1SvImJ_P0049180 Proc protein_coding protein_coding MGP_129S1SvImJ_T0049560.1 MGP_129S1SvImJ_G0024372.1 mouse_genomes_project 18 38823990 39124802 + MGP_129S1SvImJ_P0049560 Kctd16 protein_coding protein_coding MGP_129S1SvImJ_T0017688.1 MGP_129S1SvImJ_G0015372.1 mouse_genomes_project 18 85880989 85882751 - D030046N08Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0049846.1 MGP_129S1SvImJ_G0024489.1 mouse_genomes_project 18 62122947 62127232 + MGP_129S1SvImJ_P0049846 Gm9949 protein_coding protein_coding MGP_129S1SvImJ_T0050218.1 MGP_129S1SvImJ_G0024601.1 mouse_genomes_project 18 83503098 83598704 + MGP_129S1SvImJ_P0050218 Mbp protein_coding protein_coding MGP_129S1SvImJ_T0050219.1 MGP_129S1SvImJ_G0024601.1 mouse_genomes_project 18 83503100 83555195 + MGP_129S1SvImJ_P0050219 Mbp protein_coding protein_coding MGP_129S1SvImJ_T0050220.1 MGP_129S1SvImJ_G0024601.1 mouse_genomes_project 18 83503114 83625563 + MGP_129S1SvImJ_P0050220 Mbp protein_coding protein_coding MGP_129S1SvImJ_T0050221.1 MGP_129S1SvImJ_G0024601.1 mouse_genomes_project 18 83503188 83625562 + MGP_129S1SvImJ_P0050221 Mbp protein_coding protein_coding MGP_129S1SvImJ_T0050222.1 MGP_129S1SvImJ_G0024601.1 mouse_genomes_project 18 83503322 83624143 + MGP_129S1SvImJ_P0050222 Mbp protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050223.1 MGP_129S1SvImJ_G0024601.1 mouse_genomes_project 18 83594462 83625563 + MGP_129S1SvImJ_P0050223 Mbp protein_coding protein_coding MGP_129S1SvImJ_T0050224.1 MGP_129S1SvImJ_G0024601.1 mouse_genomes_project 18 83594462 83625563 + MGP_129S1SvImJ_P0050224 Mbp protein_coding protein_coding MGP_129S1SvImJ_T0050225.1 MGP_129S1SvImJ_G0024601.1 mouse_genomes_project 18 83594469 83625553 + MGP_129S1SvImJ_P0050225 Mbp protein_coding protein_coding MGP_129S1SvImJ_T0050226.1 MGP_129S1SvImJ_G0024601.1 mouse_genomes_project 18 83594507 83625563 + MGP_129S1SvImJ_P0050226 Mbp protein_coding protein_coding MGP_129S1SvImJ_T0050227.1 MGP_129S1SvImJ_G0024601.1 mouse_genomes_project 18 83594529 83624082 + MGP_129S1SvImJ_P0050227 Mbp protein_coding protein_coding MGP_129S1SvImJ_T0050228.1 MGP_129S1SvImJ_G0024601.1 mouse_genomes_project 18 83594545 83625563 + MGP_129S1SvImJ_P0050228 Mbp protein_coding protein_coding MGP_129S1SvImJ_T0050229.1 MGP_129S1SvImJ_G0024601.1 mouse_genomes_project 18 83594582 83625552 + MGP_129S1SvImJ_P0050229 Mbp protein_coding protein_coding MGP_129S1SvImJ_T0050230.1 MGP_129S1SvImJ_G0024601.1 mouse_genomes_project 18 83603186 83624213 + Mbp protein_coding processed_transcript MGP_129S1SvImJ_T0098537.1 MGP_129S1SvImJ_G0036622.1 mouse_genomes_project 18 9774934 9775048 - Gm22340 rRNA rRNA MGP_129S1SvImJ_T0049301.1 MGP_129S1SvImJ_G0024264.1 mouse_genomes_project 18 33967635 33969737 - MGP_129S1SvImJ_P0049301 Mzb1 protein_coding protein_coding MGP_129S1SvImJ_T0049706.1 MGP_129S1SvImJ_G0024436.1 mouse_genomes_project 18 52646741 52759206 + MGP_129S1SvImJ_P0049706 Prdm6 protein_coding protein_coding MGP_129S1SvImJ_T0049707.1 MGP_129S1SvImJ_G0024436.1 mouse_genomes_project 18 52647762 52759994 + MGP_129S1SvImJ_P0049707 Prdm6 protein_coding protein_coding MGP_129S1SvImJ_T0049708.1 MGP_129S1SvImJ_G0024436.1 mouse_genomes_project 18 52740463 52759994 + MGP_129S1SvImJ_P0049708 Prdm6 protein_coding protein_coding MGP_129S1SvImJ_T0098545.1 MGP_129S1SvImJ_G0036630.1 mouse_genomes_project 18 69578282 69578416 - Gm23536 rRNA rRNA MGP_129S1SvImJ_T0003859.1 MGP_129S1SvImJ_G0003462.1 mouse_genomes_project 18 86021733 86025667 - antisense antisense MGP_129S1SvImJ_T0050053.1 MGP_129S1SvImJ_G0024546.1 mouse_genomes_project 18 71740651 72906838 - MGP_129S1SvImJ_P0050053 Dcc protein_coding protein_coding MGP_129S1SvImJ_T0050054.1 MGP_129S1SvImJ_G0024546.1 mouse_genomes_project 18 71740903 72906786 - MGP_129S1SvImJ_P0050054 Dcc protein_coding protein_coding MGP_129S1SvImJ_T0050055.1 MGP_129S1SvImJ_G0024546.1 mouse_genomes_project 18 72480835 72906810 - Dcc protein_coding retained_intron MGP_129S1SvImJ_T0048964.1 MGP_129S1SvImJ_G0024137.1 mouse_genomes_project 18 5130064 5132013 - MGP_129S1SvImJ_P0048964 protein_coding protein_coding MGP_129S1SvImJ_T0049849.1 MGP_129S1SvImJ_G0024492.1 mouse_genomes_project 18 62535891 62539743 - MGP_129S1SvImJ_P0049849 Spink7 protein_coding protein_coding MGP_129S1SvImJ_T0049099.1 MGP_129S1SvImJ_G0024191.1 mouse_genomes_project 18 20370812 20727638 - MGP_129S1SvImJ_P0049099 Nol4 protein_coding protein_coding MGP_129S1SvImJ_T0049100.1 MGP_129S1SvImJ_G0024191.1 mouse_genomes_project 18 20370822 20542475 - MGP_129S1SvImJ_P0049100 Nol4 protein_coding protein_coding MGP_129S1SvImJ_T0049101.1 MGP_129S1SvImJ_G0024191.1 mouse_genomes_project 18 20371022 20725885 - MGP_129S1SvImJ_P0049101 Nol4 protein_coding protein_coding MGP_129S1SvImJ_T0049102.1 MGP_129S1SvImJ_G0024191.1 mouse_genomes_project 18 20371939 20542475 - MGP_129S1SvImJ_P0049102 Nol4 protein_coding protein_coding MGP_129S1SvImJ_T0049103.1 MGP_129S1SvImJ_G0024191.1 mouse_genomes_project 18 20372165 20727674 - MGP_129S1SvImJ_P0049103 Nol4 protein_coding protein_coding MGP_129S1SvImJ_T0049104.1 MGP_129S1SvImJ_G0024191.1 mouse_genomes_project 18 20513766 20519353 - Nol4 protein_coding processed_transcript MGP_129S1SvImJ_T0049105.1 MGP_129S1SvImJ_G0024191.1 mouse_genomes_project 18 20603831 20726168 - MGP_129S1SvImJ_P0049105 Nol4 protein_coding protein_coding MGP_129S1SvImJ_T0049106.1 MGP_129S1SvImJ_G0024191.1 mouse_genomes_project 18 20613062 20647533 - Nol4 protein_coding processed_transcript MGP_129S1SvImJ_T0049946.1 MGP_129S1SvImJ_G0024526.1 mouse_genomes_project 18 67779292 67916068 - MGP_129S1SvImJ_P0049946 Spire1 protein_coding protein_coding MGP_129S1SvImJ_T0049947.1 MGP_129S1SvImJ_G0024526.1 mouse_genomes_project 18 67779298 67855675 - MGP_129S1SvImJ_P0049947 Spire1 protein_coding protein_coding MGP_129S1SvImJ_T0049948.1 MGP_129S1SvImJ_G0024526.1 mouse_genomes_project 18 67779298 67852216 - MGP_129S1SvImJ_P0049948 Spire1 protein_coding protein_coding MGP_129S1SvImJ_T0049078.1 MGP_129S1SvImJ_G0024180.1 mouse_genomes_project 18 18125573 18172940 + MGP_129S1SvImJ_P0049078 Dsg2 protein_coding protein_coding MGP_129S1SvImJ_T0049079.1 MGP_129S1SvImJ_G0024180.1 mouse_genomes_project 18 18125654 18153266 + MGP_129S1SvImJ_P0049079 Dsg2 protein_coding protein_coding MGP_129S1SvImJ_T0049080.1 MGP_129S1SvImJ_G0024180.1 mouse_genomes_project 18 18125745 18150629 + MGP_129S1SvImJ_P0049080 Dsg2 protein_coding protein_coding MGP_129S1SvImJ_T0049400.1 MGP_129S1SvImJ_G0024301.1 mouse_genomes_project 18 35382736 36251401 + MGP_129S1SvImJ_P0049400 Gm37013 protein_coding protein_coding MGP_129S1SvImJ_T0011486.1 MGP_129S1SvImJ_G0009602.1 mouse_genomes_project 18 70215428 70215538 - Gm22508 misc_RNA misc_RNA MGP_129S1SvImJ_T0049772.1 MGP_129S1SvImJ_G0024465.1 mouse_genomes_project 18 60405509 60436655 - MGP_129S1SvImJ_P0049772 Synpo protein_coding protein_coding MGP_129S1SvImJ_T0049773.1 MGP_129S1SvImJ_G0024465.1 mouse_genomes_project 18 60405518 60436892 - MGP_129S1SvImJ_P0049773 Synpo protein_coding protein_coding MGP_129S1SvImJ_T0049774.1 MGP_129S1SvImJ_G0024465.1 mouse_genomes_project 18 60405526 60444576 - MGP_129S1SvImJ_P0049774 Synpo protein_coding protein_coding MGP_129S1SvImJ_T0049775.1 MGP_129S1SvImJ_G0024465.1 mouse_genomes_project 18 60405527 60412853 - Synpo protein_coding processed_transcript MGP_129S1SvImJ_T0049776.1 MGP_129S1SvImJ_G0024465.1 mouse_genomes_project 18 60412561 60436555 - MGP_129S1SvImJ_P0049776 Synpo protein_coding protein_coding MGP_129S1SvImJ_T0049777.1 MGP_129S1SvImJ_G0024465.1 mouse_genomes_project 18 60412562 60422456 - MGP_129S1SvImJ_P0049777 Synpo protein_coding protein_coding MGP_129S1SvImJ_T0049778.1 MGP_129S1SvImJ_G0024465.1 mouse_genomes_project 18 60412564 60464165 - MGP_129S1SvImJ_P0049778 Synpo protein_coding protein_coding MGP_129S1SvImJ_T0049779.1 MGP_129S1SvImJ_G0024465.1 mouse_genomes_project 18 60416464 60435644 - MGP_129S1SvImJ_P0049779 Synpo protein_coding protein_coding MGP_129S1SvImJ_T0049780.1 MGP_129S1SvImJ_G0024465.1 mouse_genomes_project 18 60416615 60436581 - Synpo protein_coding processed_transcript MGP_129S1SvImJ_T0049781.1 MGP_129S1SvImJ_G0024465.1 mouse_genomes_project 18 60418238 60475939 - Synpo protein_coding processed_transcript MGP_129S1SvImJ_T0049782.1 MGP_129S1SvImJ_G0024465.1 mouse_genomes_project 18 60444220 60464118 - Synpo protein_coding processed_transcript MGP_129S1SvImJ_T0049783.1 MGP_129S1SvImJ_G0024465.1 mouse_genomes_project 18 60461509 60464118 - Synpo protein_coding processed_transcript MGP_129S1SvImJ_T0007051.1 MGP_129S1SvImJ_G0005797.1 mouse_genomes_project 18 66126350 66129260 + Raxos1 lincRNA lincRNA MGP_129S1SvImJ_T0049087.1 MGP_129S1SvImJ_G0024185.1 mouse_genomes_project 18 18562806 18594416 + MGP_129S1SvImJ_P0049087 Rnf125 protein_coding protein_coding MGP_129S1SvImJ_T0050165.1 MGP_129S1SvImJ_G0024580.1 mouse_genomes_project 18 78602906 78700705 + MGP_129S1SvImJ_P0050165 Pstpip2 protein_coding protein_coding MGP_129S1SvImJ_T0049799.1 MGP_129S1SvImJ_G0024471.1 mouse_genomes_project 18 60773162 60843362 + MGP_129S1SvImJ_P0049799 Camk2a protein_coding protein_coding MGP_129S1SvImJ_T0049800.1 MGP_129S1SvImJ_G0024471.1 mouse_genomes_project 18 60773176 60792948 + Camk2a protein_coding retained_intron MGP_129S1SvImJ_T0049801.1 MGP_129S1SvImJ_G0024471.1 mouse_genomes_project 18 60773176 60841625 + MGP_129S1SvImJ_P0049801 Camk2a protein_coding protein_coding MGP_129S1SvImJ_T0049802.1 MGP_129S1SvImJ_G0024471.1 mouse_genomes_project 18 60773269 60792966 + MGP_129S1SvImJ_P0049802 Camk2a protein_coding protein_coding MGP_129S1SvImJ_T0049803.1 MGP_129S1SvImJ_G0024471.1 mouse_genomes_project 18 60774493 60805231 + MGP_129S1SvImJ_P0049803 Camk2a protein_coding protein_coding MGP_129S1SvImJ_T0049804.1 MGP_129S1SvImJ_G0024471.1 mouse_genomes_project 18 60814460 60840081 + MGP_129S1SvImJ_P0049804 Camk2a protein_coding protein_coding MGP_129S1SvImJ_T0049805.1 MGP_129S1SvImJ_G0024471.1 mouse_genomes_project 18 60814506 60840915 + MGP_129S1SvImJ_P0049805 Camk2a protein_coding protein_coding MGP_129S1SvImJ_T0049431.1 MGP_129S1SvImJ_G0024325.1 mouse_genomes_project 18 35871550 35876211 + MGP_129S1SvImJ_P0049431 Pcdhb17 protein_coding protein_coding MGP_129S1SvImJ_T0007008.1 MGP_129S1SvImJ_G0005766.1 mouse_genomes_project 18 1650882 1689327 + lincRNA lincRNA MGP_129S1SvImJ_T0007038.1 MGP_129S1SvImJ_G0005788.1 mouse_genomes_project 18 48798726 48819371 - 1700065O20Rik lincRNA lincRNA MGP_129S1SvImJ_T0049316.1 MGP_129S1SvImJ_G0024270.1 mouse_genomes_project 18 34065099 34071974 - MGP_129S1SvImJ_P0049316 Tmem173 protein_coding protein_coding MGP_129S1SvImJ_T0049951.1 MGP_129S1SvImJ_G0024529.1 mouse_genomes_project 18 67972927 68042077 - MGP_129S1SvImJ_P0049951 Ptpn2 protein_coding protein_coding MGP_129S1SvImJ_T0049952.1 MGP_129S1SvImJ_G0024529.1 mouse_genomes_project 18 67972928 68042092 - MGP_129S1SvImJ_P0049952 Ptpn2 protein_coding protein_coding MGP_129S1SvImJ_T0049953.1 MGP_129S1SvImJ_G0024529.1 mouse_genomes_project 18 67980104 68042099 - MGP_129S1SvImJ_P0049953 Ptpn2 protein_coding protein_coding MGP_129S1SvImJ_T0049954.1 MGP_129S1SvImJ_G0024529.1 mouse_genomes_project 18 67985610 68004894 - Ptpn2 protein_coding processed_transcript MGP_129S1SvImJ_T0013343.1 MGP_129S1SvImJ_G0011432.1 mouse_genomes_project 18 35016501 35017273 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099607.1 MGP_129S1SvImJ_G0037674.1 mouse_genomes_project 18 54440561 54440641 + Gm22597 snRNA snRNA MGP_129S1SvImJ_T0007030.1 MGP_129S1SvImJ_G0005782.1 mouse_genomes_project 18 33032251 33040579 - Gm26538 lincRNA lincRNA MGP_129S1SvImJ_T0049059.1 MGP_129S1SvImJ_G0024170.1 mouse_genomes_project 18 12071874 12196131 + MGP_129S1SvImJ_P0049059 Taf4b protein_coding protein_coding MGP_129S1SvImJ_T0049060.1 MGP_129S1SvImJ_G0024170.1 mouse_genomes_project 18 12072296 12193900 + MGP_129S1SvImJ_P0049060 Taf4b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049807.1 MGP_129S1SvImJ_G0024473.1 mouse_genomes_project 18 60873882 60892447 - MGP_129S1SvImJ_P0049807 Cdx1 protein_coding protein_coding MGP_129S1SvImJ_T0017685.1 MGP_129S1SvImJ_G0015370.1 mouse_genomes_project 18 76065477 76067223 - Gm20544 processed_transcript processed_transcript MGP_129S1SvImJ_T0049529.1 MGP_129S1SvImJ_G0024367.1 mouse_genomes_project 18 37339190 37432344 - MGP_129S1SvImJ_P0049529 Fgf1 protein_coding protein_coding MGP_129S1SvImJ_T0049530.1 MGP_129S1SvImJ_G0024367.1 mouse_genomes_project 18 37339192 37443797 - MGP_129S1SvImJ_P0049530 Fgf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049531.1 MGP_129S1SvImJ_G0024367.1 mouse_genomes_project 18 37340694 37369296 - MGP_129S1SvImJ_P0049531 Fgf1 protein_coding protein_coding MGP_129S1SvImJ_T0049532.1 MGP_129S1SvImJ_G0024367.1 mouse_genomes_project 18 37342424 37361297 - MGP_129S1SvImJ_P0049532 Fgf1 protein_coding protein_coding MGP_129S1SvImJ_T0049533.1 MGP_129S1SvImJ_G0024367.1 mouse_genomes_project 18 37348627 37368681 - MGP_129S1SvImJ_P0049533 Fgf1 protein_coding protein_coding MGP_129S1SvImJ_T0049534.1 MGP_129S1SvImJ_G0024367.1 mouse_genomes_project 18 37348668 37361410 - Fgf1 protein_coding retained_intron MGP_129S1SvImJ_T0049535.1 MGP_129S1SvImJ_G0024367.1 mouse_genomes_project 18 37361116 37443548 - MGP_129S1SvImJ_P0049535 Fgf1 protein_coding protein_coding MGP_129S1SvImJ_T0049689.1 MGP_129S1SvImJ_G0024428.1 mouse_genomes_project 18 51638732 51653070 - MGP_129S1SvImJ_P0049689 Lox protein_coding protein_coding MGP_129S1SvImJ_T0049690.1 MGP_129S1SvImJ_G0024428.1 mouse_genomes_project 18 51639900 51652911 - MGP_129S1SvImJ_P0049690 Lox protein_coding protein_coding MGP_129S1SvImJ_T0013330.1 MGP_129S1SvImJ_G0011419.1 mouse_genomes_project 18 9947946 9948739 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049063.1 MGP_129S1SvImJ_G0024172.1 mouse_genomes_project 18 12713664 12729028 - MGP_129S1SvImJ_P0049063 Aqp4 protein_coding protein_coding MGP_129S1SvImJ_T0049943.1 MGP_129S1SvImJ_G0024523.1 mouse_genomes_project 18 67677208 67690397 + MGP_129S1SvImJ_P0049943 Tubb6 protein_coding protein_coding MGP_129S1SvImJ_T0099593.1 MGP_129S1SvImJ_G0037660.1 mouse_genomes_project 18 19026871 19026978 - Gm22886 snRNA snRNA MGP_129S1SvImJ_T0049714.1 MGP_129S1SvImJ_G0024441.1 mouse_genomes_project 18 55870563 55893582 - Aldh7a1 protein_coding processed_transcript MGP_129S1SvImJ_T0049715.1 MGP_129S1SvImJ_G0024441.1 mouse_genomes_project 18 55890840 55943650 - MGP_129S1SvImJ_P0049715 Aldh7a1 protein_coding protein_coding MGP_129S1SvImJ_T0049716.1 MGP_129S1SvImJ_G0024441.1 mouse_genomes_project 18 55893337 55932194 - MGP_129S1SvImJ_P0049716 Aldh7a1 protein_coding protein_coding MGP_129S1SvImJ_T0049717.1 MGP_129S1SvImJ_G0024441.1 mouse_genomes_project 18 55893476 55932175 - MGP_129S1SvImJ_P0049717 Aldh7a1 protein_coding protein_coding MGP_129S1SvImJ_T0049718.1 MGP_129S1SvImJ_G0024441.1 mouse_genomes_project 18 55893482 55932084 - MGP_129S1SvImJ_P0049718 Aldh7a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049719.1 MGP_129S1SvImJ_G0024441.1 mouse_genomes_project 18 55899149 55904379 - Aldh7a1 protein_coding retained_intron MGP_129S1SvImJ_T0049720.1 MGP_129S1SvImJ_G0024441.1 mouse_genomes_project 18 55904009 55932092 - MGP_129S1SvImJ_P0049720 Aldh7a1 protein_coding protein_coding MGP_129S1SvImJ_T0049721.1 MGP_129S1SvImJ_G0024441.1 mouse_genomes_project 18 55913575 55929291 - Aldh7a1 protein_coding retained_intron MGP_129S1SvImJ_T0049722.1 MGP_129S1SvImJ_G0024441.1 mouse_genomes_project 18 55920252 55932063 - MGP_129S1SvImJ_P0049722 Aldh7a1 protein_coding protein_coding MGP_129S1SvImJ_T0049630.1 MGP_129S1SvImJ_G0024405.1 mouse_genomes_project 18 45028962 45076203 - MGP_129S1SvImJ_P0049630 Pggt1b protein_coding protein_coding MGP_129S1SvImJ_T0049175.1 MGP_129S1SvImJ_G0024220.1 mouse_genomes_project 18 30062394 30089268 + MGP_129S1SvImJ_P0049175 Lims2 protein_coding protein_coding MGP_129S1SvImJ_T0049177.1 MGP_129S1SvImJ_G0024220.1 mouse_genomes_project 18 30084738 30089343 + MGP_129S1SvImJ_P0049177 Lims2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049971.1 MGP_129S1SvImJ_G0024537.1 mouse_genomes_project 18 69334808 69340323 - MGP_129S1SvImJ_P0049971 4930546C10Rik protein_coding protein_coding MGP_129S1SvImJ_T0050167.1 MGP_129S1SvImJ_G0024582.1 mouse_genomes_project 18 78840768 78856082 - MGP_129S1SvImJ_P0050167 Siglec15 protein_coding protein_coding MGP_129S1SvImJ_T0100862.1 MGP_129S1SvImJ_G0038929.1 mouse_genomes_project 18 33859056 33859252 + Snora74a snoRNA snoRNA MGP_129S1SvImJ_T0011468.1 MGP_129S1SvImJ_G0009584.1 mouse_genomes_project 18 14518905 14519134 - Gm24015 misc_RNA misc_RNA MGP_129S1SvImJ_T0049412.1 MGP_129S1SvImJ_G0024309.1 mouse_genomes_project 18 35538407 35583235 + MGP_129S1SvImJ_P0049412 Pcdhac2 protein_coding protein_coding MGP_129S1SvImJ_T0050034.1 MGP_129S1SvImJ_G0024540.1 mouse_genomes_project 18 70430322 70601651 - MGP_129S1SvImJ_P0050034 Rab27b protein_coding protein_coding MGP_129S1SvImJ_T0050035.1 MGP_129S1SvImJ_G0024540.1 mouse_genomes_project 18 70434847 70505241 - MGP_129S1SvImJ_P0050035 Rab27b protein_coding protein_coding MGP_129S1SvImJ_T0050036.1 MGP_129S1SvImJ_G0024540.1 mouse_genomes_project 18 70434847 70505241 - MGP_129S1SvImJ_P0050036 Rab27b protein_coding protein_coding MGP_129S1SvImJ_T0050037.1 MGP_129S1SvImJ_G0024540.1 mouse_genomes_project 18 70598209 70601620 - Rab27b protein_coding retained_intron MGP_129S1SvImJ_T0013365.1 MGP_129S1SvImJ_G0011454.1 mouse_genomes_project 18 77961485 77962459 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049071.1 MGP_129S1SvImJ_G0024176.1 mouse_genomes_project 18 17526884 17557120 - MGP_129S1SvImJ_P0049071 Dsc2 protein_coding protein_coding MGP_129S1SvImJ_T0049072.1 MGP_129S1SvImJ_G0024176.1 mouse_genomes_project 18 17526884 17557196 - MGP_129S1SvImJ_P0049072 Dsc2 protein_coding protein_coding MGP_129S1SvImJ_T0049073.1 MGP_129S1SvImJ_G0024176.1 mouse_genomes_project 18 17527594 17535776 - MGP_129S1SvImJ_P0049073 Dsc2 protein_coding protein_coding MGP_129S1SvImJ_T0049074.1 MGP_129S1SvImJ_G0024176.1 mouse_genomes_project 18 17527729 17557151 - MGP_129S1SvImJ_P0049074 Dsc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049249.1 MGP_129S1SvImJ_G0024247.1 mouse_genomes_project 18 32916816 32949875 - MGP_129S1SvImJ_P0049249 Gfra3 protein_coding protein_coding MGP_129S1SvImJ_T0049110.1 MGP_129S1SvImJ_G0024193.1 mouse_genomes_project 18 21462922 21486484 + Mapre2 protein_coding retained_intron MGP_129S1SvImJ_T0049111.1 MGP_129S1SvImJ_G0024193.1 mouse_genomes_project 18 21462928 21589364 + MGP_129S1SvImJ_P0049111 Mapre2 protein_coding protein_coding MGP_129S1SvImJ_T0049112.1 MGP_129S1SvImJ_G0024193.1 mouse_genomes_project 18 21462982 21566348 + MGP_129S1SvImJ_P0049112 Mapre2 protein_coding protein_coding MGP_129S1SvImJ_T0049113.1 MGP_129S1SvImJ_G0024193.1 mouse_genomes_project 18 21464314 21598032 + MGP_129S1SvImJ_P0049113 Mapre2 protein_coding protein_coding MGP_129S1SvImJ_T0049114.1 MGP_129S1SvImJ_G0024193.1 mouse_genomes_project 18 21464337 21502757 + Mapre2 protein_coding processed_transcript MGP_129S1SvImJ_T0049115.1 MGP_129S1SvImJ_G0024193.1 mouse_genomes_project 18 21508651 21539504 + Mapre2 protein_coding retained_intron MGP_129S1SvImJ_T0049116.1 MGP_129S1SvImJ_G0024193.1 mouse_genomes_project 18 21508734 21599530 + MGP_129S1SvImJ_P0049116 Mapre2 protein_coding protein_coding MGP_129S1SvImJ_T0049117.1 MGP_129S1SvImJ_G0024193.1 mouse_genomes_project 18 21508734 21596599 + MGP_129S1SvImJ_P0049117 Mapre2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049752.1 MGP_129S1SvImJ_G0024456.1 mouse_genomes_project 18 58646540 58662122 + MGP_129S1SvImJ_P0049752 A730017C20Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049753.1 MGP_129S1SvImJ_G0024456.1 mouse_genomes_project 18 58646574 58662122 + MGP_129S1SvImJ_P0049753 A730017C20Rik protein_coding protein_coding MGP_129S1SvImJ_T0049754.1 MGP_129S1SvImJ_G0024456.1 mouse_genomes_project 18 58646754 58662122 + MGP_129S1SvImJ_P0049754 A730017C20Rik protein_coding protein_coding MGP_129S1SvImJ_T0049755.1 MGP_129S1SvImJ_G0024456.1 mouse_genomes_project 18 58646758 58660781 + MGP_129S1SvImJ_P0049755 A730017C20Rik protein_coding protein_coding MGP_129S1SvImJ_T0049756.1 MGP_129S1SvImJ_G0024456.1 mouse_genomes_project 18 58646786 58660984 + MGP_129S1SvImJ_P0049756 A730017C20Rik protein_coding protein_coding MGP_129S1SvImJ_T0049757.1 MGP_129S1SvImJ_G0024456.1 mouse_genomes_project 18 58646802 58659834 + A730017C20Rik protein_coding retained_intron MGP_129S1SvImJ_T0049758.1 MGP_129S1SvImJ_G0024456.1 mouse_genomes_project 18 58646803 58661091 + MGP_129S1SvImJ_P0049758 A730017C20Rik protein_coding protein_coding MGP_129S1SvImJ_T0050056.1 MGP_129S1SvImJ_G0024547.1 mouse_genomes_project 18 74157275 74179928 + MGP_129S1SvImJ_P0050056 Mex3c protein_coding protein_coding MGP_129S1SvImJ_T0010271.1 MGP_129S1SvImJ_G0008387.1 mouse_genomes_project 18 59203915 59204022 + Mir6355 miRNA miRNA MGP_129S1SvImJ_T0049179.1 MGP_129S1SvImJ_G0024223.1 mouse_genomes_project 18 30188670 30227767 + MGP_129S1SvImJ_P0049179 Iws1 protein_coding protein_coding MGP_129S1SvImJ_T0049549.1 MGP_129S1SvImJ_G0024368.1 mouse_genomes_project 18 37951431 38030220 - MGP_129S1SvImJ_P0049549 Nr3c1 protein_coding protein_coding MGP_129S1SvImJ_T0049550.1 MGP_129S1SvImJ_G0024368.1 mouse_genomes_project 18 37951433 38026806 - MGP_129S1SvImJ_P0049550 Nr3c1 protein_coding protein_coding MGP_129S1SvImJ_T0049551.1 MGP_129S1SvImJ_G0024368.1 mouse_genomes_project 18 37952874 38029393 - MGP_129S1SvImJ_P0049551 Nr3c1 protein_coding protein_coding MGP_129S1SvImJ_T0049552.1 MGP_129S1SvImJ_G0024368.1 mouse_genomes_project 18 37955369 38026793 - MGP_129S1SvImJ_P0049552 Nr3c1 protein_coding protein_coding MGP_129S1SvImJ_T0049553.1 MGP_129S1SvImJ_G0024368.1 mouse_genomes_project 18 37965316 38029435 - MGP_129S1SvImJ_P0049553 Nr3c1 protein_coding protein_coding MGP_129S1SvImJ_T0049554.1 MGP_129S1SvImJ_G0024368.1 mouse_genomes_project 18 38026431 38030897 - MGP_129S1SvImJ_P0049554 Nr3c1 protein_coding protein_coding MGP_129S1SvImJ_T0049555.1 MGP_129S1SvImJ_G0024368.1 mouse_genomes_project 18 38026646 38028830 - MGP_129S1SvImJ_P0049555 Nr3c1 protein_coding protein_coding MGP_129S1SvImJ_T0049556.1 MGP_129S1SvImJ_G0024368.1 mouse_genomes_project 18 38026720 38030895 - MGP_129S1SvImJ_P0049556 Nr3c1 protein_coding protein_coding MGP_129S1SvImJ_T0049589.1 MGP_129S1SvImJ_G0024386.1 mouse_genomes_project 18 42244499 42412881 - MGP_129S1SvImJ_P0049589 Jakmip2 protein_coding protein_coding MGP_129S1SvImJ_T0100846.1 MGP_129S1SvImJ_G0038913.1 mouse_genomes_project 18 6540145 6540273 + Gm22765 snoRNA snoRNA MGP_129S1SvImJ_T0007007.1 MGP_129S1SvImJ_G0005765.1 mouse_genomes_project 18 1218940 1225252 - Gm26865 lincRNA lincRNA MGP_129S1SvImJ_T0007032.1 MGP_129S1SvImJ_G0005784.1 mouse_genomes_project 18 36058085 36064375 + 3222401L13Rik lincRNA lincRNA MGP_129S1SvImJ_T0007033.1 MGP_129S1SvImJ_G0005784.1 mouse_genomes_project 18 36058541 36061370 + 3222401L13Rik lincRNA lincRNA MGP_129S1SvImJ_T0007039.1 MGP_129S1SvImJ_G0005789.1 mouse_genomes_project 18 53619102 53654677 + Redrum lincRNA lincRNA MGP_129S1SvImJ_T0098339.1 MGP_129S1SvImJ_G0036424.1 mouse_genomes_project 18 60247613 60249755 + pseudogene pseudogene MGP_129S1SvImJ_T0048980.1 MGP_129S1SvImJ_G0024147.1 mouse_genomes_project 18 7257751 7434329 + Greb1l protein_coding retained_intron MGP_129S1SvImJ_T0048981.1 MGP_129S1SvImJ_G0024147.1 mouse_genomes_project 18 7257753 7503940 + MGP_129S1SvImJ_P0048981 Greb1l protein_coding protein_coding MGP_129S1SvImJ_T0048982.1 MGP_129S1SvImJ_G0024147.1 mouse_genomes_project 18 7381039 7501488 + MGP_129S1SvImJ_P0048982 Greb1l protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048983.1 MGP_129S1SvImJ_G0024147.1 mouse_genomes_project 18 7389236 7473462 + MGP_129S1SvImJ_P0048983 Greb1l protein_coding protein_coding MGP_129S1SvImJ_T0048984.1 MGP_129S1SvImJ_G0024147.1 mouse_genomes_project 18 7444965 7451105 + Greb1l protein_coding retained_intron MGP_129S1SvImJ_T0048985.1 MGP_129S1SvImJ_G0024147.1 mouse_genomes_project 18 7446266 7494678 + MGP_129S1SvImJ_P0048985 Greb1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048986.1 MGP_129S1SvImJ_G0024147.1 mouse_genomes_project 18 7494759 7499827 + Greb1l protein_coding processed_transcript MGP_129S1SvImJ_T0003816.1 MGP_129S1SvImJ_G0003431.1 mouse_genomes_project 18 9349138 9354232 + Gm15956 antisense antisense MGP_129S1SvImJ_T0049945.1 MGP_129S1SvImJ_G0024525.1 mouse_genomes_project 18 67756136 67771670 + MGP_129S1SvImJ_P0049945 Slmo1 protein_coding protein_coding MGP_129S1SvImJ_T0099597.1 MGP_129S1SvImJ_G0037664.1 mouse_genomes_project 18 32209189 32209250 - Gm22788 snRNA snRNA MGP_129S1SvImJ_T0050277.1 MGP_129S1SvImJ_G0024618.1 mouse_genomes_project 18 90655073 91149405 - MGP_129S1SvImJ_P0050277 Dok6 protein_coding protein_coding MGP_129S1SvImJ_T0050278.1 MGP_129S1SvImJ_G0024618.1 mouse_genomes_project 18 90828894 90938299 - Dok6 protein_coding retained_intron MGP_129S1SvImJ_T0101653.1 MGP_129S1SvImJ_G0039683.1 mouse_genomes_project 18 32408244 32423145 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101654.1 MGP_129S1SvImJ_G0039683.1 mouse_genomes_project 18 32410266 32410538 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0003815.1 MGP_129S1SvImJ_G0003430.1 mouse_genomes_project 18 7724309 7728453 - Mir133a-1hg antisense antisense MGP_129S1SvImJ_T0100873.1 MGP_129S1SvImJ_G0038940.1 mouse_genomes_project 18 75677682 75677748 + Snord58b snoRNA snoRNA MGP_129S1SvImJ_T0013354.1 MGP_129S1SvImJ_G0011443.1 mouse_genomes_project 18 45263270 45263846 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049959.1 MGP_129S1SvImJ_G0024533.1 mouse_genomes_project 18 68606087 68647603 - MGP_129S1SvImJ_P0049959 Fam210a protein_coding protein_coding MGP_129S1SvImJ_T0049960.1 MGP_129S1SvImJ_G0024533.1 mouse_genomes_project 18 68621816 68647472 - MGP_129S1SvImJ_P0049960 Fam210a protein_coding protein_coding MGP_129S1SvImJ_T0003852.1 MGP_129S1SvImJ_G0003457.1 mouse_genomes_project 18 70395422 70421106 - 1700061H18Rik antisense antisense MGP_129S1SvImJ_T0003853.1 MGP_129S1SvImJ_G0003457.1 mouse_genomes_project 18 70399033 70421093 - 1700061H18Rik antisense antisense MGP_129S1SvImJ_T0049121.1 MGP_129S1SvImJ_G0024197.1 mouse_genomes_project 18 21723726 21734835 - MGP_129S1SvImJ_P0049121 Zfp24 protein_coding protein_coding MGP_129S1SvImJ_T0049122.1 MGP_129S1SvImJ_G0024197.1 mouse_genomes_project 18 21727949 21734345 - MGP_129S1SvImJ_P0049122 Zfp24 protein_coding protein_coding MGP_129S1SvImJ_T0049123.1 MGP_129S1SvImJ_G0024197.1 mouse_genomes_project 18 21731995 21734395 - MGP_129S1SvImJ_P0049123 Zfp24 protein_coding protein_coding MGP_129S1SvImJ_T0050100.1 MGP_129S1SvImJ_G0024564.1 mouse_genomes_project 18 76069191 76097824 + MGP_129S1SvImJ_P0050100 Smad7 protein_coding protein_coding MGP_129S1SvImJ_T0050101.1 MGP_129S1SvImJ_G0024564.1 mouse_genomes_project 18 76070543 76097368 + MGP_129S1SvImJ_P0050101 Smad7 protein_coding protein_coding MGP_129S1SvImJ_T0050102.1 MGP_129S1SvImJ_G0024564.1 mouse_genomes_project 18 76070650 76095881 + MGP_129S1SvImJ_P0050102 Smad7 protein_coding protein_coding MGP_129S1SvImJ_T0050103.1 MGP_129S1SvImJ_G0024564.1 mouse_genomes_project 18 76071636 76096260 + MGP_129S1SvImJ_P0050103 Smad7 protein_coding protein_coding MGP_129S1SvImJ_T0050104.1 MGP_129S1SvImJ_G0024564.1 mouse_genomes_project 18 76076575 76095896 + Smad7 protein_coding processed_transcript MGP_129S1SvImJ_T0010287.1 MGP_129S1SvImJ_G0008403.1 mouse_genomes_project 18 75567331 75567413 - Gm25594 miRNA miRNA MGP_129S1SvImJ_T0049740.1 MGP_129S1SvImJ_G0024448.1 mouse_genomes_project 18 56779651 56823953 + MGP_129S1SvImJ_P0049740 Prrc1 protein_coding protein_coding MGP_129S1SvImJ_T0011481.1 MGP_129S1SvImJ_G0009597.1 mouse_genomes_project 18 54898136 54898421 - Gm24514 misc_RNA misc_RNA MGP_129S1SvImJ_T0049419.1 MGP_129S1SvImJ_G0024315.1 mouse_genomes_project 18 35729778 35732119 + MGP_129S1SvImJ_P0049419 Pcdhb6 protein_coding protein_coding MGP_129S1SvImJ_T0049420.1 MGP_129S1SvImJ_G0024315.1 mouse_genomes_project 18 35729803 35733531 + MGP_129S1SvImJ_P0049420 Pcdhb6 protein_coding protein_coding MGP_129S1SvImJ_T0049168.1 MGP_129S1SvImJ_G0024215.1 mouse_genomes_project 18 29740876 29835974 + MGP_129S1SvImJ_P0049168 Sap130 protein_coding protein_coding MGP_129S1SvImJ_T0049169.1 MGP_129S1SvImJ_G0024215.1 mouse_genomes_project 18 29740888 29835974 + MGP_129S1SvImJ_P0049169 Sap130 protein_coding protein_coding MGP_129S1SvImJ_T0049251.1 MGP_129S1SvImJ_G0024249.1 mouse_genomes_project 18 32970508 32971935 + MGP_129S1SvImJ_P0049251 Gm3550 protein_coding protein_coding MGP_129S1SvImJ_T0049709.1 MGP_129S1SvImJ_G0024437.1 mouse_genomes_project 18 52874583 52941764 - MGP_129S1SvImJ_P0049709 Cep120 protein_coding protein_coding MGP_129S1SvImJ_T0049022.1 MGP_129S1SvImJ_G0024159.1 mouse_genomes_project 18 9418484 9473263 - MGP_129S1SvImJ_P0049022 Ankrd29 protein_coding protein_coding MGP_129S1SvImJ_T0049023.1 MGP_129S1SvImJ_G0024159.1 mouse_genomes_project 18 9418487 9438938 - Ankrd29 protein_coding processed_transcript MGP_129S1SvImJ_T0049024.1 MGP_129S1SvImJ_G0024159.1 mouse_genomes_project 18 9420663 9473190 - MGP_129S1SvImJ_P0049024 Ankrd29 protein_coding protein_coding MGP_129S1SvImJ_T0049025.1 MGP_129S1SvImJ_G0024159.1 mouse_genomes_project 18 9443544 9473272 - MGP_129S1SvImJ_P0049025 Ankrd29 protein_coding protein_coding MGP_129S1SvImJ_T0048906.1 MGP_129S1SvImJ_G0024127.1 mouse_genomes_project 18 2464904 2642512 + MGP_129S1SvImJ_P0048906 Zeb1 protein_coding protein_coding MGP_129S1SvImJ_T0048907.1 MGP_129S1SvImJ_G0024127.1 mouse_genomes_project 18 2464916 2585644 + Zeb1 protein_coding retained_intron MGP_129S1SvImJ_T0048908.1 MGP_129S1SvImJ_G0024127.1 mouse_genomes_project 18 2464935 2633581 + MGP_129S1SvImJ_P0048908 Zeb1 protein_coding protein_coding MGP_129S1SvImJ_T0048909.1 MGP_129S1SvImJ_G0024127.1 mouse_genomes_project 18 2464935 2633964 + MGP_129S1SvImJ_P0048909 Zeb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048910.1 MGP_129S1SvImJ_G0024127.1 mouse_genomes_project 18 2464956 2633618 + MGP_129S1SvImJ_P0048910 Zeb1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048911.1 MGP_129S1SvImJ_G0024127.1 mouse_genomes_project 18 2466357 2520518 + Zeb1 protein_coding processed_transcript MGP_129S1SvImJ_T0048912.1 MGP_129S1SvImJ_G0024127.1 mouse_genomes_project 18 2466651 2625794 + MGP_129S1SvImJ_P0048912 Zeb1 protein_coding protein_coding MGP_129S1SvImJ_T0048913.1 MGP_129S1SvImJ_G0024127.1 mouse_genomes_project 18 2466910 2625921 + Zeb1 protein_coding processed_transcript MGP_129S1SvImJ_T0048914.1 MGP_129S1SvImJ_G0024127.1 mouse_genomes_project 18 2467252 2634790 + Zeb1 protein_coding retained_intron MGP_129S1SvImJ_T0048915.1 MGP_129S1SvImJ_G0024127.1 mouse_genomes_project 18 2476689 2521956 + Zeb1 protein_coding processed_transcript MGP_129S1SvImJ_T0048916.1 MGP_129S1SvImJ_G0024127.1 mouse_genomes_project 18 2511349 2642516 + MGP_129S1SvImJ_P0048916 Zeb1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048917.1 MGP_129S1SvImJ_G0024127.1 mouse_genomes_project 18 2622778 2639846 + Zeb1 protein_coding processed_transcript MGP_129S1SvImJ_T0007043.1 MGP_129S1SvImJ_G0005792.1 mouse_genomes_project 18 57707993 57721384 + Gm26507 lincRNA lincRNA MGP_129S1SvImJ_T0049176.1 MGP_129S1SvImJ_G0024221.1 mouse_genomes_project 18 30073644 30080284 - MGP_129S1SvImJ_P0049176 Gpr17 protein_coding protein_coding MGP_129S1SvImJ_T0049632.1 MGP_129S1SvImJ_G0024407.1 mouse_genomes_project 18 45304663 45331236 - MGP_129S1SvImJ_P0049632 Fem1c protein_coding protein_coding MGP_129S1SvImJ_T0049330.1 MGP_129S1SvImJ_G0024275.1 mouse_genomes_project 18 34668093 34688508 + MGP_129S1SvImJ_P0049330 Pura protein_coding protein_coding MGP_129S1SvImJ_T0049726.1 MGP_129S1SvImJ_G0024443.1 mouse_genomes_project 18 55959001 55966330 + MGP_129S1SvImJ_P0049726 Tex43 protein_coding protein_coding MGP_129S1SvImJ_T0049727.1 MGP_129S1SvImJ_G0024443.1 mouse_genomes_project 18 55959030 55964267 + MGP_129S1SvImJ_P0049727 Tex43 protein_coding protein_coding MGP_129S1SvImJ_T0049728.1 MGP_129S1SvImJ_G0024443.1 mouse_genomes_project 18 55959040 55966260 + MGP_129S1SvImJ_P0049728 Tex43 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049729.1 MGP_129S1SvImJ_G0024443.1 mouse_genomes_project 18 55959077 55966330 + MGP_129S1SvImJ_P0049729 Tex43 protein_coding protein_coding MGP_129S1SvImJ_T0050099.1 MGP_129S1SvImJ_G0024563.1 mouse_genomes_project 18 75695488 75976523 + MGP_129S1SvImJ_P0050099 Dym protein_coding protein_coding MGP_129S1SvImJ_T0049374.1 MGP_129S1SvImJ_G0024289.1 mouse_genomes_project 18 35173287 35176763 + MGP_129S1SvImJ_P0049374 Wdr55 protein_coding protein_coding MGP_129S1SvImJ_T0101657.1 MGP_129S1SvImJ_G0039685.1 mouse_genomes_project 18 36055067 36055542 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101658.1 MGP_129S1SvImJ_G0039685.1 mouse_genomes_project 18 36055387 36056807 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0049784.1 MGP_129S1SvImJ_G0024466.1 mouse_genomes_project 18 60509371 60550500 - MGP_129S1SvImJ_P0049784 Ndst1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049254.1 MGP_129S1SvImJ_G0024251.1 mouse_genomes_project 18 33011494 33076104 + MGP_129S1SvImJ_P0049254 Kdm3b protein_coding protein_coding MGP_129S1SvImJ_T0049255.1 MGP_129S1SvImJ_G0024251.1 mouse_genomes_project 18 33056205 33075739 + MGP_129S1SvImJ_P0049255 Kdm3b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048979.1 MGP_129S1SvImJ_G0024146.1 mouse_genomes_project 18 6999566 7116477 - MGP_129S1SvImJ_P0048979 Rock1 protein_coding protein_coding MGP_129S1SvImJ_T0010256.1 MGP_129S1SvImJ_G0008372.1 mouse_genomes_project 18 22176144 22176205 - Mir187 miRNA miRNA MGP_129S1SvImJ_T0003844.1 MGP_129S1SvImJ_G0003454.1 mouse_genomes_project 18 61591638 61592993 - Gm38165 antisense antisense MGP_129S1SvImJ_T0003858.1 MGP_129S1SvImJ_G0003461.1 mouse_genomes_project 18 81926059 81927181 + Gm27239 antisense antisense MGP_129S1SvImJ_T0100879.1 MGP_129S1SvImJ_G0038946.1 mouse_genomes_project 18 89214580 89214714 - Gm24987 snoRNA snoRNA MGP_129S1SvImJ_T0049362.1 MGP_129S1SvImJ_G0024283.1 mouse_genomes_project 18 35086116 35090812 + MGP_129S1SvImJ_P0049362 Slc35a4 protein_coding protein_coding MGP_129S1SvImJ_T0049363.1 MGP_129S1SvImJ_G0024283.1 mouse_genomes_project 18 35087257 35090812 + MGP_129S1SvImJ_P0049363 Slc35a4 protein_coding protein_coding MGP_129S1SvImJ_T0049364.1 MGP_129S1SvImJ_G0024283.1 mouse_genomes_project 18 35087261 35089391 + Slc35a4 protein_coding processed_transcript MGP_129S1SvImJ_T0049365.1 MGP_129S1SvImJ_G0024283.1 mouse_genomes_project 18 35087270 35088648 + Slc35a4 protein_coding processed_transcript MGP_129S1SvImJ_T0049366.1 MGP_129S1SvImJ_G0024283.1 mouse_genomes_project 18 35087270 35090812 + MGP_129S1SvImJ_P0049366 Slc35a4 protein_coding protein_coding MGP_129S1SvImJ_T0049367.1 MGP_129S1SvImJ_G0024283.1 mouse_genomes_project 18 35087287 35089414 + MGP_129S1SvImJ_P0049367 Slc35a4 protein_coding protein_coding MGP_129S1SvImJ_T0011484.1 MGP_129S1SvImJ_G0009600.1 mouse_genomes_project 18 65561193 65561514 + Gm22567 misc_RNA misc_RNA MGP_129S1SvImJ_T0049157.1 MGP_129S1SvImJ_G0024210.1 mouse_genomes_project 18 28310328 28395486 + MGP_129S1SvImJ_P0049157 Pik3c3 protein_coding protein_coding MGP_129S1SvImJ_T0049158.1 MGP_129S1SvImJ_G0024210.1 mouse_genomes_project 18 28310451 28378328 + MGP_129S1SvImJ_P0049158 Pik3c3 protein_coding protein_coding MGP_129S1SvImJ_T0049159.1 MGP_129S1SvImJ_G0024210.1 mouse_genomes_project 18 28310453 28390476 + MGP_129S1SvImJ_P0049159 Pik3c3 protein_coding protein_coding MGP_129S1SvImJ_T0049160.1 MGP_129S1SvImJ_G0024210.1 mouse_genomes_project 18 28310508 28395480 + MGP_129S1SvImJ_P0049160 Pik3c3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050210.1 MGP_129S1SvImJ_G0024597.1 mouse_genomes_project 18 81530405 81638403 - MGP_129S1SvImJ_P0050210 Nfatc1 protein_coding protein_coding MGP_129S1SvImJ_T0050211.1 MGP_129S1SvImJ_G0024597.1 mouse_genomes_project 18 81530405 81633512 - MGP_129S1SvImJ_P0050211 Nfatc1 protein_coding protein_coding MGP_129S1SvImJ_T0050212.1 MGP_129S1SvImJ_G0024597.1 mouse_genomes_project 18 81530405 81638403 - MGP_129S1SvImJ_P0050212 Nfatc1 protein_coding protein_coding MGP_129S1SvImJ_T0050213.1 MGP_129S1SvImJ_G0024597.1 mouse_genomes_project 18 81571609 81633512 - MGP_129S1SvImJ_P0050213 Nfatc1 protein_coding protein_coding MGP_129S1SvImJ_T0010266.1 MGP_129S1SvImJ_G0008382.1 mouse_genomes_project 18 40926212 40926275 + Gm22697 miRNA miRNA MGP_129S1SvImJ_T0013362.1 MGP_129S1SvImJ_G0011451.1 mouse_genomes_project 18 60610613 60611025 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049402.1 MGP_129S1SvImJ_G0024303.1 mouse_genomes_project 18 35390077 36251401 + MGP_129S1SvImJ_P0049402 Gm37388 protein_coding protein_coding MGP_129S1SvImJ_T0010253.1 MGP_129S1SvImJ_G0008369.1 mouse_genomes_project 18 7728050 7728122 - Mir1a-2 miRNA miRNA MGP_129S1SvImJ_T0050264.1 MGP_129S1SvImJ_G0024613.1 mouse_genomes_project 18 87599647 87714812 + MGP_129S1SvImJ_P0050264 Neto1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0050166.1 MGP_129S1SvImJ_G0024581.1 mouse_genomes_project 18 78712895 78830252 + MGP_129S1SvImJ_P0050166 Epg5 protein_coding protein_coding MGP_129S1SvImJ_T0049766.1 MGP_129S1SvImJ_G0024463.1 mouse_genomes_project 18 60372400 60384456 + MGP_129S1SvImJ_P0049766 Rbm22 protein_coding protein_coding MGP_129S1SvImJ_T0049767.1 MGP_129S1SvImJ_G0024463.1 mouse_genomes_project 18 60372428 60373151 + Rbm22 protein_coding retained_intron MGP_129S1SvImJ_T0049768.1 MGP_129S1SvImJ_G0024463.1 mouse_genomes_project 18 60372432 60381951 + Rbm22 protein_coding retained_intron MGP_129S1SvImJ_T0049769.1 MGP_129S1SvImJ_G0024463.1 mouse_genomes_project 18 60382067 60382792 + Rbm22 protein_coding retained_intron MGP_129S1SvImJ_T0049770.1 MGP_129S1SvImJ_G0024463.1 mouse_genomes_project 18 60382250 60383638 + Rbm22 protein_coding retained_intron MGP_129S1SvImJ_T0049203.1 MGP_129S1SvImJ_G0024236.1 mouse_genomes_project 18 32422296 32514085 + MGP_129S1SvImJ_P0049203 protein_coding protein_coding MGP_129S1SvImJ_T0049204.1 MGP_129S1SvImJ_G0024236.1 mouse_genomes_project 18 32422356 32519187 + MGP_129S1SvImJ_P0049204 protein_coding protein_coding MGP_129S1SvImJ_T0049205.1 MGP_129S1SvImJ_G0024236.1 mouse_genomes_project 18 32422356 32522767 + MGP_129S1SvImJ_P0049205 protein_coding protein_coding MGP_129S1SvImJ_T0049206.1 MGP_129S1SvImJ_G0024236.1 mouse_genomes_project 18 32422385 32500749 + protein_coding retained_intron MGP_129S1SvImJ_T0049207.1 MGP_129S1SvImJ_G0024236.1 mouse_genomes_project 18 32422624 32478175 + MGP_129S1SvImJ_P0049207 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049208.1 MGP_129S1SvImJ_G0024236.1 mouse_genomes_project 18 32449599 32465586 + protein_coding retained_intron MGP_129S1SvImJ_T0049209.1 MGP_129S1SvImJ_G0024236.1 mouse_genomes_project 18 32449603 32490974 + MGP_129S1SvImJ_P0049209 protein_coding protein_coding MGP_129S1SvImJ_T0049210.1 MGP_129S1SvImJ_G0024236.1 mouse_genomes_project 18 32468009 32522776 + MGP_129S1SvImJ_P0049210 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049211.1 MGP_129S1SvImJ_G0024236.1 mouse_genomes_project 18 32500512 32514905 + MGP_129S1SvImJ_P0049211 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049212.1 MGP_129S1SvImJ_G0024236.1 mouse_genomes_project 18 32501807 32511316 + protein_coding processed_transcript MGP_129S1SvImJ_T0098543.1 MGP_129S1SvImJ_G0036628.1 mouse_genomes_project 18 57733182 57733286 - Gm25660 rRNA rRNA MGP_129S1SvImJ_T0003826.1 MGP_129S1SvImJ_G0003438.1 mouse_genomes_project 18 35360934 35366326 - antisense antisense MGP_129S1SvImJ_T0049567.1 MGP_129S1SvImJ_G0024376.1 mouse_genomes_project 18 40793589 40793883 + MGP_129S1SvImJ_P0049567 Gm5689 protein_coding protein_coding MGP_129S1SvImJ_T0049095.1 MGP_129S1SvImJ_G0024190.1 mouse_genomes_project 18 20031893 20217435 + MGP_129S1SvImJ_P0049095 Asxl3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049096.1 MGP_129S1SvImJ_G0024190.1 mouse_genomes_project 18 20032426 20066720 + Asxl3 protein_coding retained_intron MGP_129S1SvImJ_T0049097.1 MGP_129S1SvImJ_G0024190.1 mouse_genomes_project 18 20032630 20217775 + MGP_129S1SvImJ_P0049097 Asxl3 protein_coding protein_coding MGP_129S1SvImJ_T0049098.1 MGP_129S1SvImJ_G0024190.1 mouse_genomes_project 18 20032630 20217563 + MGP_129S1SvImJ_P0049098 Asxl3 protein_coding protein_coding MGP_129S1SvImJ_T0010290.1 MGP_129S1SvImJ_G0008406.1 mouse_genomes_project 18 83000525 83000596 - Mir5127 miRNA miRNA MGP_129S1SvImJ_T0001031.1 MGP_129S1SvImJ_G0000960.1 mouse_genomes_project 18 54403164 54403376 + TEC TEC MGP_129S1SvImJ_T0049558.1 MGP_129S1SvImJ_G0024370.1 mouse_genomes_project 18 38766773 38782364 - MGP_129S1SvImJ_P0049558 Yipf5 protein_coding protein_coding MGP_129S1SvImJ_T0049646.1 MGP_129S1SvImJ_G0024416.1 mouse_genomes_project 18 45801160 45945305 + MGP_129S1SvImJ_P0049646 Commd10 protein_coding protein_coding MGP_129S1SvImJ_T0049972.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69757143 69987737 + MGP_129S1SvImJ_P0049972 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049973.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69757933 70114521 + MGP_129S1SvImJ_P0049973 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049974.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69758276 70119256 + MGP_129S1SvImJ_P0049974 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049975.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69758279 70113567 + MGP_129S1SvImJ_P0049975 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049976.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69758316 70113455 + MGP_129S1SvImJ_P0049976 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049977.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69758333 69988402 + MGP_129S1SvImJ_P0049977 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049978.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69759506 70118143 + MGP_129S1SvImJ_P0049978 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049979.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69759506 70114708 + MGP_129S1SvImJ_P0049979 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049980.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69759506 70113581 + MGP_129S1SvImJ_P0049980 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049981.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69759522 70113389 + MGP_129S1SvImJ_P0049981 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049982.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69759524 70063848 + MGP_129S1SvImJ_P0049982 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049983.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69759534 69908959 + Tcf4 protein_coding processed_transcript MGP_129S1SvImJ_T0049984.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69759624 70113389 + MGP_129S1SvImJ_P0049984 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049985.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69759946 70060663 + MGP_129S1SvImJ_P0049985 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049986.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69760145 70113416 + MGP_129S1SvImJ_P0049986 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049987.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69761725 70113389 + MGP_129S1SvImJ_P0049987 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049988.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69761771 69771707 + Tcf4 protein_coding processed_transcript MGP_129S1SvImJ_T0049989.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69762682 69988296 + MGP_129S1SvImJ_P0049989 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049990.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69762693 70113629 + MGP_129S1SvImJ_P0049990 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049991.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69762695 69988303 + MGP_129S1SvImJ_P0049991 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049992.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69762950 70113640 + MGP_129S1SvImJ_P0049992 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049993.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69763005 70079418 + Tcf4 protein_coding processed_transcript MGP_129S1SvImJ_T0049994.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69763359 70069932 + MGP_129S1SvImJ_P0049994 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049995.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69834164 70113630 + MGP_129S1SvImJ_P0049995 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049996.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69920517 70063896 + MGP_129S1SvImJ_P0049996 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049997.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69923227 70113436 + MGP_129S1SvImJ_P0049997 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049998.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69923366 70086623 + MGP_129S1SvImJ_P0049998 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0049999.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69923488 70079459 + MGP_129S1SvImJ_P0049999 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0050000.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69941925 70113445 + MGP_129S1SvImJ_P0050000 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0050001.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69942164 70069988 + MGP_129S1SvImJ_P0050001 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0050002.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69942212 70113389 + MGP_129S1SvImJ_P0050002 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0050003.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69942222 70113468 + MGP_129S1SvImJ_P0050003 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0050004.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69942267 70063933 + MGP_129S1SvImJ_P0050004 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0050005.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69943602 70069948 + MGP_129S1SvImJ_P0050005 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0050006.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69943715 70113313 + MGP_129S1SvImJ_P0050006 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0050007.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69943918 70086822 + MGP_129S1SvImJ_P0050007 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0050008.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69943941 69947202 + Tcf4 protein_coding retained_intron MGP_129S1SvImJ_T0050009.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69943955 69988342 + Tcf4 protein_coding processed_transcript MGP_129S1SvImJ_T0050010.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69944278 70113451 + MGP_129S1SvImJ_P0050010 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0050011.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69944418 70063895 + MGP_129S1SvImJ_P0050011 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0050012.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69944598 70060709 + Tcf4 protein_coding retained_intron MGP_129S1SvImJ_T0050013.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69986661 70078215 + Tcf4 protein_coding processed_transcript MGP_129S1SvImJ_T0050014.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 69986989 70063974 + Tcf4 protein_coding processed_transcript MGP_129S1SvImJ_T0050015.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 70017986 70113636 + MGP_129S1SvImJ_P0050015 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0050016.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 70018360 70086770 + MGP_129S1SvImJ_P0050016 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0050017.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 70018401 70104547 + MGP_129S1SvImJ_P0050017 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0050018.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 70018407 70112915 + MGP_129S1SvImJ_P0050018 Tcf4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050019.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 70018414 70114710 + MGP_129S1SvImJ_P0050019 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0050020.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 70018415 70060799 + Tcf4 protein_coding retained_intron MGP_129S1SvImJ_T0050021.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 70018415 70022447 + Tcf4 protein_coding retained_intron MGP_129S1SvImJ_T0050022.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 70018432 70086739 + Tcf4 protein_coding processed_transcript MGP_129S1SvImJ_T0050023.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 70018571 70078239 + MGP_129S1SvImJ_P0050023 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0050024.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 70019170 70086637 + MGP_129S1SvImJ_P0050024 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0050025.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 70024353 70079406 + MGP_129S1SvImJ_P0050025 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0050026.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 70038806 70113389 + MGP_129S1SvImJ_P0050026 Tcf4 protein_coding protein_coding MGP_129S1SvImJ_T0050027.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 70085538 70089163 + Tcf4 protein_coding retained_intron MGP_129S1SvImJ_T0050028.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 70108514 70114710 + Tcf4 protein_coding retained_intron MGP_129S1SvImJ_T0050029.1 MGP_129S1SvImJ_G0024538.1 mouse_genomes_project 18 70112571 70113824 + Tcf4 protein_coding retained_intron MGP_129S1SvImJ_T0013334.1 MGP_129S1SvImJ_G0011423.1 mouse_genomes_project 18 18703226 18703670 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049088.1 MGP_129S1SvImJ_G0024186.1 mouse_genomes_project 18 18621515 18648866 + MGP_129S1SvImJ_P0049088 Rnf138 protein_coding protein_coding MGP_129S1SvImJ_T0049089.1 MGP_129S1SvImJ_G0024186.1 mouse_genomes_project 18 18621515 18648866 + MGP_129S1SvImJ_P0049089 Rnf138 protein_coding protein_coding MGP_129S1SvImJ_T0100878.1 MGP_129S1SvImJ_G0038945.1 mouse_genomes_project 18 82987122 82987250 + Gm26012 snoRNA snoRNA MGP_129S1SvImJ_T0050119.1 MGP_129S1SvImJ_G0024570.1 mouse_genomes_project 18 77656269 77699930 + MGP_129S1SvImJ_P0050119 Hdhd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050121.1 MGP_129S1SvImJ_G0024570.1 mouse_genomes_project 18 77672523 77700652 + MGP_129S1SvImJ_P0050121 Hdhd2 protein_coding protein_coding MGP_129S1SvImJ_T0050122.1 MGP_129S1SvImJ_G0024570.1 mouse_genomes_project 18 77672523 77689337 + MGP_129S1SvImJ_P0050122 Hdhd2 protein_coding protein_coding MGP_129S1SvImJ_T0050123.1 MGP_129S1SvImJ_G0024570.1 mouse_genomes_project 18 77672534 77689337 + MGP_129S1SvImJ_P0050123 Hdhd2 protein_coding protein_coding MGP_129S1SvImJ_T0050124.1 MGP_129S1SvImJ_G0024570.1 mouse_genomes_project 18 77672534 77699930 + MGP_129S1SvImJ_P0050124 Hdhd2 protein_coding protein_coding MGP_129S1SvImJ_T0050125.1 MGP_129S1SvImJ_G0024570.1 mouse_genomes_project 18 77672559 77684185 + MGP_129S1SvImJ_P0050125 Hdhd2 protein_coding protein_coding MGP_129S1SvImJ_T0050126.1 MGP_129S1SvImJ_G0024570.1 mouse_genomes_project 18 77672792 77701383 + MGP_129S1SvImJ_P0050126 Hdhd2 protein_coding protein_coding MGP_129S1SvImJ_T0050127.1 MGP_129S1SvImJ_G0024570.1 mouse_genomes_project 18 77672792 77682345 + MGP_129S1SvImJ_P0050127 Hdhd2 protein_coding protein_coding MGP_129S1SvImJ_T0050128.1 MGP_129S1SvImJ_G0024570.1 mouse_genomes_project 18 77672825 77700652 + MGP_129S1SvImJ_P0050128 Hdhd2 protein_coding protein_coding MGP_129S1SvImJ_T0050129.1 MGP_129S1SvImJ_G0024570.1 mouse_genomes_project 18 77672844 77701383 + MGP_129S1SvImJ_P0050129 Hdhd2 protein_coding protein_coding MGP_129S1SvImJ_T0001034.1 MGP_129S1SvImJ_G0000963.1 mouse_genomes_project 18 61856279 61856524 - TEC TEC MGP_129S1SvImJ_T0049411.1 MGP_129S1SvImJ_G0024308.1 mouse_genomes_project 18 35485701 35583235 + MGP_129S1SvImJ_P0049411 Pcdhac1 protein_coding protein_coding MGP_129S1SvImJ_T0013326.1 MGP_129S1SvImJ_G0011415.1 mouse_genomes_project 18 6661377 6662374 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100876.1 MGP_129S1SvImJ_G0038943.1 mouse_genomes_project 18 78483081 78483213 + Gm26014 snoRNA snoRNA MGP_129S1SvImJ_T0049911.1 MGP_129S1SvImJ_G0024510.1 mouse_genomes_project 18 65853905 65908347 + MGP_129S1SvImJ_P0049911 Oacyl protein_coding protein_coding MGP_129S1SvImJ_T0049912.1 MGP_129S1SvImJ_G0024510.1 mouse_genomes_project 18 65853907 65908411 + MGP_129S1SvImJ_P0049912 Oacyl protein_coding protein_coding MGP_129S1SvImJ_T0049913.1 MGP_129S1SvImJ_G0024510.1 mouse_genomes_project 18 65905825 65907198 + Oacyl protein_coding processed_transcript MGP_129S1SvImJ_T0100861.1 MGP_129S1SvImJ_G0038928.1 mouse_genomes_project 18 33856516 33856657 + Mir1949 snoRNA snoRNA MGP_129S1SvImJ_T0007031.1 MGP_129S1SvImJ_G0005783.1 mouse_genomes_project 18 36020875 36021729 + 4930517L18Rik lincRNA lincRNA MGP_129S1SvImJ_T0003813.1 MGP_129S1SvImJ_G0003429.1 mouse_genomes_project 18 3361391 3368232 + Gm28529 antisense antisense MGP_129S1SvImJ_T0003814.1 MGP_129S1SvImJ_G0003429.1 mouse_genomes_project 18 3361403 3362373 + Gm28529 antisense antisense MGP_129S1SvImJ_T0007054.1 MGP_129S1SvImJ_G0005800.1 mouse_genomes_project 18 76225095 76233254 + Gm10532 lincRNA lincRNA MGP_129S1SvImJ_T0049858.1 MGP_129S1SvImJ_G0024497.1 mouse_genomes_project 18 62935439 62958763 + MGP_129S1SvImJ_P0049858 Napg protein_coding protein_coding MGP_129S1SvImJ_T0049859.1 MGP_129S1SvImJ_G0024497.1 mouse_genomes_project 18 62935464 62938257 + Napg protein_coding retained_intron MGP_129S1SvImJ_T0049860.1 MGP_129S1SvImJ_G0024497.1 mouse_genomes_project 18 62935504 62956245 + MGP_129S1SvImJ_P0049860 Napg protein_coding protein_coding MGP_129S1SvImJ_T0049861.1 MGP_129S1SvImJ_G0024497.1 mouse_genomes_project 18 62935525 62940389 + Napg protein_coding retained_intron MGP_129S1SvImJ_T0049862.1 MGP_129S1SvImJ_G0024497.1 mouse_genomes_project 18 62937841 62940617 + Napg protein_coding retained_intron MGP_129S1SvImJ_T0049863.1 MGP_129S1SvImJ_G0024497.1 mouse_genomes_project 18 62943559 62949436 + Napg protein_coding processed_transcript MGP_129S1SvImJ_T0049864.1 MGP_129S1SvImJ_G0024497.1 mouse_genomes_project 18 62943642 62953886 + Napg protein_coding retained_intron MGP_129S1SvImJ_T0049865.1 MGP_129S1SvImJ_G0024497.1 mouse_genomes_project 18 62945815 62954335 + Napg protein_coding processed_transcript MGP_129S1SvImJ_T0013339.1 MGP_129S1SvImJ_G0011428.1 mouse_genomes_project 18 28512939 28515253 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049835.1 MGP_129S1SvImJ_G0024483.1 mouse_genomes_project 18 61600048 61610951 - MGP_129S1SvImJ_P0049835 Pcyox1l protein_coding protein_coding MGP_129S1SvImJ_T0049836.1 MGP_129S1SvImJ_G0024483.1 mouse_genomes_project 18 61602716 61610929 - MGP_129S1SvImJ_P0049836 Pcyox1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049837.1 MGP_129S1SvImJ_G0024483.1 mouse_genomes_project 18 61606199 61610951 - Pcyox1l protein_coding retained_intron MGP_129S1SvImJ_T0003837.1 MGP_129S1SvImJ_G0003449.1 mouse_genomes_project 18 37901837 37924377 - Gm15337 antisense antisense MGP_129S1SvImJ_T0050064.1 MGP_129S1SvImJ_G0024549.1 mouse_genomes_project 18 74326979 74346417 - MGP_129S1SvImJ_P0050064 Elac1 protein_coding protein_coding MGP_129S1SvImJ_T0050097.1 MGP_129S1SvImJ_G0024561.1 mouse_genomes_project 18 75677100 75680009 + MGP_129S1SvImJ_P0050097 Rpl17 protein_coding protein_coding MGP_129S1SvImJ_T0010252.1 MGP_129S1SvImJ_G0008368.1 mouse_genomes_project 18 7728015 7728137 + Mir1b miRNA miRNA MGP_129S1SvImJ_T0010270.1 MGP_129S1SvImJ_G0008386.1 mouse_genomes_project 18 57130340 57130436 + Gm44491 miRNA miRNA MGP_129S1SvImJ_T0013342.1 MGP_129S1SvImJ_G0011431.1 mouse_genomes_project 18 34105750 34106101 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049201.1 MGP_129S1SvImJ_G0024234.1 mouse_genomes_project 18 31629081 31634700 + MGP_129S1SvImJ_P0049201 Gm10549 protein_coding protein_coding MGP_129S1SvImJ_T0007020.1 MGP_129S1SvImJ_G0005774.1 mouse_genomes_project 18 29898218 29906060 - Gm26533 lincRNA lincRNA MGP_129S1SvImJ_T0049476.1 MGP_129S1SvImJ_G0024354.1 mouse_genomes_project 18 36261704 36357229 - MGP_129S1SvImJ_P0049476 Diaph1 protein_coding protein_coding MGP_129S1SvImJ_T0049477.1 MGP_129S1SvImJ_G0024354.1 mouse_genomes_project 18 36261706 36357176 - MGP_129S1SvImJ_P0049477 Diaph1 protein_coding protein_coding MGP_129S1SvImJ_T0049478.1 MGP_129S1SvImJ_G0024354.1 mouse_genomes_project 18 36261706 36357134 - MGP_129S1SvImJ_P0049478 Diaph1 protein_coding protein_coding MGP_129S1SvImJ_T0049479.1 MGP_129S1SvImJ_G0024354.1 mouse_genomes_project 18 36261708 36325682 - MGP_129S1SvImJ_P0049479 Diaph1 protein_coding protein_coding MGP_129S1SvImJ_T0049480.1 MGP_129S1SvImJ_G0024354.1 mouse_genomes_project 18 36262927 36357164 - MGP_129S1SvImJ_P0049480 Diaph1 protein_coding protein_coding MGP_129S1SvImJ_T0049481.1 MGP_129S1SvImJ_G0024354.1 mouse_genomes_project 18 36263203 36271499 - Diaph1 protein_coding processed_transcript MGP_129S1SvImJ_T0049482.1 MGP_129S1SvImJ_G0024354.1 mouse_genomes_project 18 36272532 36357071 - MGP_129S1SvImJ_P0049482 Diaph1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049483.1 MGP_129S1SvImJ_G0024354.1 mouse_genomes_project 18 36273576 36274236 - Diaph1 protein_coding retained_intron MGP_129S1SvImJ_T0049484.1 MGP_129S1SvImJ_G0024354.1 mouse_genomes_project 18 36315542 36317328 - Diaph1 protein_coding retained_intron MGP_129S1SvImJ_T0049921.1 MGP_129S1SvImJ_G0024512.1 mouse_genomes_project 18 66034358 66050083 + MGP_129S1SvImJ_P0049921 Grp protein_coding protein_coding MGP_129S1SvImJ_T0049922.1 MGP_129S1SvImJ_G0024512.1 mouse_genomes_project 18 66035033 66041782 + MGP_129S1SvImJ_P0049922 Grp protein_coding protein_coding MGP_129S1SvImJ_T0049923.1 MGP_129S1SvImJ_G0024512.1 mouse_genomes_project 18 66035043 66050082 + MGP_129S1SvImJ_P0049923 Grp protein_coding protein_coding MGP_129S1SvImJ_T0049684.1 MGP_129S1SvImJ_G0024423.1 mouse_genomes_project 18 49615988 49617032 - MGP_129S1SvImJ_P0049684 Hdhd1a protein_coding protein_coding MGP_129S1SvImJ_T0049187.1 MGP_129S1SvImJ_G0024228.1 mouse_genomes_project 18 30696469 30729742 - MGP_129S1SvImJ_P0049187 Gypc protein_coding protein_coding MGP_129S1SvImJ_T0049188.1 MGP_129S1SvImJ_G0024228.1 mouse_genomes_project 18 30696472 30729688 - MGP_129S1SvImJ_P0049188 Gypc protein_coding protein_coding MGP_129S1SvImJ_T0049189.1 MGP_129S1SvImJ_G0024228.1 mouse_genomes_project 18 30697939 30703576 - MGP_129S1SvImJ_P0049189 Gypc protein_coding protein_coding MGP_129S1SvImJ_T0049601.1 MGP_129S1SvImJ_G0024394.1 mouse_genomes_project 18 42897046 42900416 - MGP_129S1SvImJ_P0049601 Gm10267 protein_coding protein_coding MGP_129S1SvImJ_T0049602.1 MGP_129S1SvImJ_G0024394.1 mouse_genomes_project 18 42897055 42899874 - MGP_129S1SvImJ_P0049602 Gm10267 protein_coding protein_coding MGP_129S1SvImJ_T0010286.1 MGP_129S1SvImJ_G0008402.1 mouse_genomes_project 18 70986290 70986394 + Mir6357 miRNA miRNA MGP_129S1SvImJ_T0049878.1 MGP_129S1SvImJ_G0024501.1 mouse_genomes_project 18 64292685 64315370 + MGP_129S1SvImJ_P0049878 St8sia3 protein_coding protein_coding MGP_129S1SvImJ_T0049879.1 MGP_129S1SvImJ_G0024501.1 mouse_genomes_project 18 64304287 64309213 + MGP_129S1SvImJ_P0049879 St8sia3 protein_coding protein_coding MGP_129S1SvImJ_T0049880.1 MGP_129S1SvImJ_G0024501.1 mouse_genomes_project 18 64304468 64309070 + St8sia3 protein_coding processed_transcript MGP_129S1SvImJ_T0049881.1 MGP_129S1SvImJ_G0024501.1 mouse_genomes_project 18 64305099 64309142 + St8sia3 protein_coding retained_intron MGP_129S1SvImJ_T0049808.1 MGP_129S1SvImJ_G0024474.1 mouse_genomes_project 18 60901395 60942322 + MGP_129S1SvImJ_P0049808 Pdgfrb protein_coding protein_coding MGP_129S1SvImJ_T0049809.1 MGP_129S1SvImJ_G0024474.1 mouse_genomes_project 18 60901445 60942317 + MGP_129S1SvImJ_P0049809 Pdgfrb protein_coding protein_coding MGP_129S1SvImJ_T0049810.1 MGP_129S1SvImJ_G0024474.1 mouse_genomes_project 18 60901470 60942325 + MGP_129S1SvImJ_P0049810 Pdgfrb protein_coding unknown_likely_coding MGP_129S1SvImJ_T0003819.1 MGP_129S1SvImJ_G0003434.1 mouse_genomes_project 18 18166379 18243991 - Gm16090 antisense antisense MGP_129S1SvImJ_T0049135.1 MGP_129S1SvImJ_G0024201.1 mouse_genomes_project 18 22241879 22295916 - MGP_129S1SvImJ_P0049135 Rprd1a protein_coding protein_coding MGP_129S1SvImJ_T0049628.1 MGP_129S1SvImJ_G0024404.1 mouse_genomes_project 18 44952041 44988404 - MGP_129S1SvImJ_P0049628 Trim36 protein_coding protein_coding MGP_129S1SvImJ_T0049629.1 MGP_129S1SvImJ_G0024404.1 mouse_genomes_project 18 44952041 45001658 - MGP_129S1SvImJ_P0049629 Trim36 protein_coding protein_coding MGP_129S1SvImJ_T0007022.1 MGP_129S1SvImJ_G0005776.1 mouse_genomes_project 18 30281096 30288049 + Gm26717 lincRNA lincRNA MGP_129S1SvImJ_T0011466.1 MGP_129S1SvImJ_G0009582.1 mouse_genomes_project 18 13391417 13391718 + Gm22389 misc_RNA misc_RNA MGP_129S1SvImJ_T0050048.1 MGP_129S1SvImJ_G0024545.1 mouse_genomes_project 18 71046992 71106596 + MGP_129S1SvImJ_P0050048 Mbd2 protein_coding protein_coding MGP_129S1SvImJ_T0050049.1 MGP_129S1SvImJ_G0024545.1 mouse_genomes_project 18 71047137 71062620 + MGP_129S1SvImJ_P0050049 Mbd2 protein_coding protein_coding MGP_129S1SvImJ_T0050050.1 MGP_129S1SvImJ_G0024545.1 mouse_genomes_project 18 71060492 71103258 + MGP_129S1SvImJ_P0050050 Mbd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050051.1 MGP_129S1SvImJ_G0024545.1 mouse_genomes_project 18 71072953 71097764 + Mbd2 protein_coding retained_intron MGP_129S1SvImJ_T0050052.1 MGP_129S1SvImJ_G0024545.1 mouse_genomes_project 18 71098303 71106242 + Mbd2 protein_coding retained_intron MGP_129S1SvImJ_T0049759.1 MGP_129S1SvImJ_G0024457.1 mouse_genomes_project 18 58764035 59012082 + MGP_129S1SvImJ_P0049759 Chsy3 protein_coding protein_coding MGP_129S1SvImJ_T0050240.1 MGP_129S1SvImJ_G0024605.1 mouse_genomes_project 18 85225706 85235905 + MGP_129S1SvImJ_P0050240 Zadh2 protein_coding protein_coding MGP_129S1SvImJ_T0100863.1 MGP_129S1SvImJ_G0038930.1 mouse_genomes_project 18 36109159 36109250 + Gm24401 snoRNA snoRNA MGP_129S1SvImJ_T0049702.1 MGP_129S1SvImJ_G0024433.1 mouse_genomes_project 18 52346788 52393475 + MGP_129S1SvImJ_P0049702 Snx2 protein_coding protein_coding MGP_129S1SvImJ_T0048890.1 MGP_129S1SvImJ_G0024124.1 mouse_genomes_project 18 1481163 1524387 + MGP_129S1SvImJ_P0048890 9430020K01Rik protein_coding protein_coding MGP_129S1SvImJ_T0003841.1 MGP_129S1SvImJ_G0003452.1 mouse_genomes_project 18 44454972 44675413 - antisense antisense MGP_129S1SvImJ_T0003842.1 MGP_129S1SvImJ_G0003452.1 mouse_genomes_project 18 44456614 44630531 - antisense antisense MGP_129S1SvImJ_T0049855.1 MGP_129S1SvImJ_G0024495.1 mouse_genomes_project 18 62598841 62599662 + MGP_129S1SvImJ_P0049855 Gm17732 protein_coding protein_coding MGP_129S1SvImJ_T0049856.1 MGP_129S1SvImJ_G0024496.1 mouse_genomes_project 18 62879199 62909347 + MGP_129S1SvImJ_P0049856 Apcdd1 protein_coding protein_coding MGP_129S1SvImJ_T0049857.1 MGP_129S1SvImJ_G0024496.1 mouse_genomes_project 18 62879201 62908616 + MGP_129S1SvImJ_P0049857 Apcdd1 protein_coding protein_coding MGP_129S1SvImJ_T0011476.1 MGP_129S1SvImJ_G0009592.1 mouse_genomes_project 18 37069810 37069929 + Gm27804 misc_RNA misc_RNA MGP_129S1SvImJ_T0049084.1 MGP_129S1SvImJ_G0024184.1 mouse_genomes_project 18 18411286 18497677 - MGP_129S1SvImJ_P0049084 Trappc8 protein_coding protein_coding MGP_129S1SvImJ_T0049085.1 MGP_129S1SvImJ_G0024184.1 mouse_genomes_project 18 18412839 18497666 - MGP_129S1SvImJ_P0049085 Trappc8 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049086.1 MGP_129S1SvImJ_G0024184.1 mouse_genomes_project 18 18443454 18497677 - MGP_129S1SvImJ_P0049086 Trappc8 protein_coding protein_coding MGP_129S1SvImJ_T0049077.1 MGP_129S1SvImJ_G0024179.1 mouse_genomes_project 18 18074962 18108817 + MGP_129S1SvImJ_P0049077 Dsg3 protein_coding protein_coding MGP_129S1SvImJ_T0049267.1 MGP_129S1SvImJ_G0024258.1 mouse_genomes_project 18 33550326 33793440 - MGP_129S1SvImJ_P0049267 Sil1 protein_coding protein_coding MGP_129S1SvImJ_T0049421.1 MGP_129S1SvImJ_G0024316.1 mouse_genomes_project 18 35737527 35741468 + MGP_129S1SvImJ_P0049421 Pcdhb7 protein_coding protein_coding MGP_129S1SvImJ_T0049961.1 MGP_129S1SvImJ_G0024534.1 mouse_genomes_project 18 68647624 68673737 + MGP_129S1SvImJ_P0049961 Rnmt protein_coding protein_coding MGP_129S1SvImJ_T0049962.1 MGP_129S1SvImJ_G0024534.1 mouse_genomes_project 18 68647661 68656688 + MGP_129S1SvImJ_P0049962 Rnmt protein_coding protein_coding MGP_129S1SvImJ_T0049963.1 MGP_129S1SvImJ_G0024534.1 mouse_genomes_project 18 68647667 68662730 + Rnmt protein_coding retained_intron MGP_129S1SvImJ_T0049964.1 MGP_129S1SvImJ_G0024534.1 mouse_genomes_project 18 68647669 68670791 + MGP_129S1SvImJ_P0049964 Rnmt protein_coding protein_coding MGP_129S1SvImJ_T0049965.1 MGP_129S1SvImJ_G0024534.1 mouse_genomes_project 18 68647691 68658953 + MGP_129S1SvImJ_P0049965 Rnmt protein_coding protein_coding MGP_129S1SvImJ_T0049966.1 MGP_129S1SvImJ_G0024534.1 mouse_genomes_project 18 68652266 68653464 + MGP_129S1SvImJ_P0049966 Rnmt protein_coding protein_coding MGP_129S1SvImJ_T0049967.1 MGP_129S1SvImJ_G0024534.1 mouse_genomes_project 18 68666375 68668129 + Rnmt protein_coding retained_intron MGP_129S1SvImJ_T0049968.1 MGP_129S1SvImJ_G0024534.1 mouse_genomes_project 18 68667881 68673736 + Rnmt protein_coding processed_transcript MGP_129S1SvImJ_T0049456.1 MGP_129S1SvImJ_G0024344.1 mouse_genomes_project 18 36135004 36259977 + MGP_129S1SvImJ_P0049456 Pcdhgb5 protein_coding protein_coding MGP_129S1SvImJ_T0049457.1 MGP_129S1SvImJ_G0024344.1 mouse_genomes_project 18 36135049 36139618 + Pcdhgb5 protein_coding retained_intron MGP_129S1SvImJ_T0011467.1 MGP_129S1SvImJ_G0009583.1 mouse_genomes_project 18 13594618 13594968 - Gm24385 misc_RNA misc_RNA MGP_129S1SvImJ_T0001026.1 MGP_129S1SvImJ_G0000955.1 mouse_genomes_project 18 5874976 5876574 + TEC TEC MGP_129S1SvImJ_T0010280.1 MGP_129S1SvImJ_G0008396.1 mouse_genomes_project 18 61548749 61548812 - Mir143 miRNA miRNA MGP_129S1SvImJ_T0050130.1 MGP_129S1SvImJ_G0024571.1 mouse_genomes_project 18 77705588 77781240 - MGP_129S1SvImJ_P0050130 Katnal2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050131.1 MGP_129S1SvImJ_G0024571.1 mouse_genomes_project 18 77705588 77781283 - MGP_129S1SvImJ_P0050131 Katnal2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050132.1 MGP_129S1SvImJ_G0024571.1 mouse_genomes_project 18 77705596 77781240 - MGP_129S1SvImJ_P0050132 Katnal2 protein_coding protein_coding MGP_129S1SvImJ_T0050133.1 MGP_129S1SvImJ_G0024571.1 mouse_genomes_project 18 77705825 77781221 - MGP_129S1SvImJ_P0050133 Katnal2 protein_coding protein_coding MGP_129S1SvImJ_T0050134.1 MGP_129S1SvImJ_G0024571.1 mouse_genomes_project 18 77706889 77735172 - Katnal2 protein_coding processed_transcript MGP_129S1SvImJ_T0050135.1 MGP_129S1SvImJ_G0024571.1 mouse_genomes_project 18 77721577 77781293 - MGP_129S1SvImJ_P0050135 Katnal2 protein_coding protein_coding MGP_129S1SvImJ_T0050136.1 MGP_129S1SvImJ_G0024571.1 mouse_genomes_project 18 77730101 77740324 - Katnal2 protein_coding processed_transcript MGP_129S1SvImJ_T0050137.1 MGP_129S1SvImJ_G0024571.1 mouse_genomes_project 18 77730843 77736502 - Katnal2 protein_coding retained_intron MGP_129S1SvImJ_T0050138.1 MGP_129S1SvImJ_G0024571.1 mouse_genomes_project 18 77738340 77781284 - MGP_129S1SvImJ_P0050138 Katnal2 protein_coding protein_coding MGP_129S1SvImJ_T0050139.1 MGP_129S1SvImJ_G0024571.1 mouse_genomes_project 18 77738824 77781295 - MGP_129S1SvImJ_P0050139 Katnal2 protein_coding protein_coding MGP_129S1SvImJ_T0049517.1 MGP_129S1SvImJ_G0024362.1 mouse_genomes_project 18 36738870 36763429 + MGP_129S1SvImJ_P0049517 Rnf14 protein_coding protein_coding MGP_129S1SvImJ_T0049518.1 MGP_129S1SvImJ_G0024362.1 mouse_genomes_project 18 36739332 36763426 + MGP_129S1SvImJ_P0049518 Rnf14 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049462.1 MGP_129S1SvImJ_G0024348.1 mouse_genomes_project 18 36158528 36259977 + MGP_129S1SvImJ_P0049462 Pcdhgb7 protein_coding protein_coding MGP_129S1SvImJ_T0049949.1 MGP_129S1SvImJ_G0024527.1 mouse_genomes_project 18 67923672 67948868 - MGP_129S1SvImJ_P0049949 Cep76 protein_coding protein_coding MGP_129S1SvImJ_T0049730.1 MGP_129S1SvImJ_G0024444.1 mouse_genomes_project 18 56099012 56147357 + MGP_129S1SvImJ_P0049730 Lmnb1 protein_coding protein_coding MGP_129S1SvImJ_T0049731.1 MGP_129S1SvImJ_G0024444.1 mouse_genomes_project 18 56121467 56126472 + Lmnb1 protein_coding retained_intron MGP_129S1SvImJ_T0049458.1 MGP_129S1SvImJ_G0024345.1 mouse_genomes_project 18 36140931 36259974 + MGP_129S1SvImJ_P0049458 Pcdhga9 protein_coding protein_coding MGP_129S1SvImJ_T0049459.1 MGP_129S1SvImJ_G0024345.1 mouse_genomes_project 18 36141364 36144401 + Pcdhga9 protein_coding retained_intron MGP_129S1SvImJ_T0049657.1 MGP_129S1SvImJ_G0024418.1 mouse_genomes_project 18 48671471 48740579 - MGP_129S1SvImJ_P0049657 Dtwd2 protein_coding protein_coding MGP_129S1SvImJ_T0049658.1 MGP_129S1SvImJ_G0024418.1 mouse_genomes_project 18 48671964 48740579 - MGP_129S1SvImJ_P0049658 Dtwd2 protein_coding protein_coding MGP_129S1SvImJ_T0049659.1 MGP_129S1SvImJ_G0024418.1 mouse_genomes_project 18 48672612 48714330 - Dtwd2 protein_coding processed_transcript MGP_129S1SvImJ_T0050241.1 MGP_129S1SvImJ_G0024606.1 mouse_genomes_project 18 85267139 85722468 - MGP_129S1SvImJ_P0050241 Zfp407 protein_coding protein_coding MGP_129S1SvImJ_T0050242.1 MGP_129S1SvImJ_G0024606.1 mouse_genomes_project 18 85351786 85757079 - MGP_129S1SvImJ_P0050242 Zfp407 protein_coding protein_coding MGP_129S1SvImJ_T0050243.1 MGP_129S1SvImJ_G0024606.1 mouse_genomes_project 18 85425507 85570837 - Zfp407 protein_coding processed_transcript MGP_129S1SvImJ_T0050244.1 MGP_129S1SvImJ_G0024606.1 mouse_genomes_project 18 85588381 85593321 - Zfp407 protein_coding retained_intron MGP_129S1SvImJ_T0050245.1 MGP_129S1SvImJ_G0024606.1 mouse_genomes_project 18 85659419 85722418 - Zfp407 protein_coding processed_transcript MGP_129S1SvImJ_T0050246.1 MGP_129S1SvImJ_G0024606.1 mouse_genomes_project 18 85716957 85757300 - Zfp407 protein_coding processed_transcript MGP_129S1SvImJ_T0007037.1 MGP_129S1SvImJ_G0005787.1 mouse_genomes_project 18 48488363 48489515 + 1700044K03Rik lincRNA lincRNA MGP_129S1SvImJ_T0013348.1 MGP_129S1SvImJ_G0011437.1 mouse_genomes_project 18 37207732 37207846 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049340.1 MGP_129S1SvImJ_G0024280.1 mouse_genomes_project 18 34964273 34988744 + MGP_129S1SvImJ_P0049340 Ankhd1 protein_coding protein_coding MGP_129S1SvImJ_T0049341.1 MGP_129S1SvImJ_G0024280.1 mouse_genomes_project 18 34964897 35067246 + MGP_129S1SvImJ_P0049341 Ankhd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049342.1 MGP_129S1SvImJ_G0024280.1 mouse_genomes_project 18 34964897 35067246 + MGP_129S1SvImJ_P0049342 Ankhd1 protein_coding protein_coding MGP_129S1SvImJ_T0049343.1 MGP_129S1SvImJ_G0024280.1 mouse_genomes_project 18 34964964 35074253 + MGP_129S1SvImJ_P0049343 Ankhd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049344.1 MGP_129S1SvImJ_G0024280.1 mouse_genomes_project 18 34986139 34988998 + Ankhd1 protein_coding retained_intron MGP_129S1SvImJ_T0049345.1 MGP_129S1SvImJ_G0024280.1 mouse_genomes_project 18 35007331 35031872 + MGP_129S1SvImJ_P0049345 Ankhd1 protein_coding protein_coding MGP_129S1SvImJ_T0049346.1 MGP_129S1SvImJ_G0024280.1 mouse_genomes_project 18 35012736 35041949 + Ankhd1 protein_coding processed_transcript MGP_129S1SvImJ_T0049347.1 MGP_129S1SvImJ_G0024280.1 mouse_genomes_project 18 35020842 35041937 + MGP_129S1SvImJ_P0049347 Ankhd1 protein_coding protein_coding MGP_129S1SvImJ_T0049348.1 MGP_129S1SvImJ_G0024280.1 mouse_genomes_project 18 35021245 35031462 + Ankhd1 protein_coding retained_intron MGP_129S1SvImJ_T0049349.1 MGP_129S1SvImJ_G0024280.1 mouse_genomes_project 18 35046700 35051349 + MGP_129S1SvImJ_P0049349 Ankhd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049350.1 MGP_129S1SvImJ_G0024280.1 mouse_genomes_project 18 35046924 35051355 + MGP_129S1SvImJ_P0049350 Ankhd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049351.1 MGP_129S1SvImJ_G0024280.1 mouse_genomes_project 18 35049733 35052631 + Ankhd1 protein_coding retained_intron MGP_129S1SvImJ_T0049352.1 MGP_129S1SvImJ_G0024280.1 mouse_genomes_project 18 35052658 35067251 + MGP_129S1SvImJ_P0049352 Ankhd1 protein_coding protein_coding MGP_129S1SvImJ_T0049353.1 MGP_129S1SvImJ_G0024280.1 mouse_genomes_project 18 35056170 35074253 + MGP_129S1SvImJ_P0049353 Ankhd1 protein_coding protein_coding MGP_129S1SvImJ_T0049354.1 MGP_129S1SvImJ_G0024280.1 mouse_genomes_project 18 35063847 35067148 + MGP_129S1SvImJ_P0049354 Ankhd1 protein_coding protein_coding MGP_129S1SvImJ_T0010257.1 MGP_129S1SvImJ_G0008373.1 mouse_genomes_project 18 31049759 31049860 - Mir6361 miRNA miRNA MGP_129S1SvImJ_T0049791.1 MGP_129S1SvImJ_G0024468.1 mouse_genomes_project 18 60610812 60647795 + MGP_129S1SvImJ_P0049791 Cd74 protein_coding protein_coding MGP_129S1SvImJ_T0049460.1 MGP_129S1SvImJ_G0024346.1 mouse_genomes_project 18 36146089 36259977 + MGP_129S1SvImJ_P0049460 Pcdhgb6 protein_coding protein_coding MGP_129S1SvImJ_T0050192.1 MGP_129S1SvImJ_G0024593.1 mouse_genomes_project 18 81138342 81157005 - MGP_129S1SvImJ_P0050192 Hsbp1l1 protein_coding protein_coding MGP_129S1SvImJ_T0049002.1 MGP_129S1SvImJ_G0024153.1 mouse_genomes_project 18 8752822 8860196 + MGP_129S1SvImJ_P0049002 Rbbp8 protein_coding protein_coding MGP_129S1SvImJ_T0049003.1 MGP_129S1SvImJ_G0024153.1 mouse_genomes_project 18 8771341 8860196 + MGP_129S1SvImJ_P0049003 Rbbp8 protein_coding protein_coding MGP_129S1SvImJ_T0049178.1 MGP_129S1SvImJ_G0024222.1 mouse_genomes_project 18 30089882 30167821 - MGP_129S1SvImJ_P0049178 Myo7b protein_coding protein_coding MGP_129S1SvImJ_T0049026.1 MGP_129S1SvImJ_G0024160.1 mouse_genomes_project 18 9502700 9779525 + MGP_129S1SvImJ_P0049026 protein_coding protein_coding MGP_129S1SvImJ_T0049027.1 MGP_129S1SvImJ_G0024160.1 mouse_genomes_project 18 9502905 9779175 + MGP_129S1SvImJ_P0049027 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049028.1 MGP_129S1SvImJ_G0024160.1 mouse_genomes_project 18 9673337 9779525 + MGP_129S1SvImJ_P0049028 protein_coding protein_coding MGP_129S1SvImJ_T0049638.1 MGP_129S1SvImJ_G0024410.1 mouse_genomes_project 18 45407256 45423675 + MGP_129S1SvImJ_P0049638 Eif1a protein_coding protein_coding MGP_129S1SvImJ_T0017669.1 MGP_129S1SvImJ_G0015367.1 mouse_genomes_project 18 56939914 56971551 - 1700066O22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017670.1 MGP_129S1SvImJ_G0015367.1 mouse_genomes_project 18 56942646 56971527 - 1700066O22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017672.1 MGP_129S1SvImJ_G0015367.1 mouse_genomes_project 18 56953818 56971538 - 1700066O22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017673.1 MGP_129S1SvImJ_G0015367.1 mouse_genomes_project 18 56953829 56971515 - 1700066O22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017674.1 MGP_129S1SvImJ_G0015367.1 mouse_genomes_project 18 56968231 56971522 - 1700066O22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0013369.1 MGP_129S1SvImJ_G0011458.1 mouse_genomes_project 18 90909713 90910172 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049941.1 MGP_129S1SvImJ_G0024521.1 mouse_genomes_project 18 67564912 67594715 + MGP_129S1SvImJ_P0049941 Impa2 protein_coding protein_coding MGP_129S1SvImJ_T0049397.1 MGP_129S1SvImJ_G0024300.1 mouse_genomes_project 18 35380863 35583235 + MGP_129S1SvImJ_P0049397 Pcdha6 protein_coding protein_coding MGP_129S1SvImJ_T0049398.1 MGP_129S1SvImJ_G0024300.1 mouse_genomes_project 18 35380880 35582966 + MGP_129S1SvImJ_P0049398 Pcdha6 protein_coding protein_coding MGP_129S1SvImJ_T0049399.1 MGP_129S1SvImJ_G0024300.1 mouse_genomes_project 18 35380882 35582732 + MGP_129S1SvImJ_P0049399 Pcdha6 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049167.1 MGP_129S1SvImJ_G0024214.1 mouse_genomes_project 18 29714646 29715886 + MGP_129S1SvImJ_P0049167 B930094E09Rik protein_coding protein_coding MGP_129S1SvImJ_T0049876.1 MGP_129S1SvImJ_G0024499.1 mouse_genomes_project 18 63666799 63697182 - MGP_129S1SvImJ_P0049876 Txnl1 protein_coding protein_coding MGP_129S1SvImJ_T0049198.1 MGP_129S1SvImJ_G0024233.1 mouse_genomes_project 18 31601680 31628307 - MGP_129S1SvImJ_P0049198 Nrep protein_coding protein_coding MGP_129S1SvImJ_T0049199.1 MGP_129S1SvImJ_G0024233.1 mouse_genomes_project 18 31601680 31628948 - MGP_129S1SvImJ_P0049199 Nrep protein_coding protein_coding MGP_129S1SvImJ_T0049200.1 MGP_129S1SvImJ_G0024233.1 mouse_genomes_project 18 31601680 31628420 - MGP_129S1SvImJ_P0049200 Nrep protein_coding protein_coding MGP_129S1SvImJ_T0011483.1 MGP_129S1SvImJ_G0009599.1 mouse_genomes_project 18 59381404 59381698 - Gm26028 misc_RNA misc_RNA MGP_129S1SvImJ_T0013367.1 MGP_129S1SvImJ_G0011456.1 mouse_genomes_project 18 85820570 85821455 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049075.1 MGP_129S1SvImJ_G0024177.1 mouse_genomes_project 18 17582336 17618114 - MGP_129S1SvImJ_P0049075 Dsc1 protein_coding protein_coding MGP_129S1SvImJ_T0010258.1 MGP_129S1SvImJ_G0008374.1 mouse_genomes_project 18 33856591 33856661 + Mir1949 miRNA miRNA MGP_129S1SvImJ_T0049944.1 MGP_129S1SvImJ_G0024524.1 mouse_genomes_project 18 67692412 67740496 - MGP_129S1SvImJ_P0049944 Afg3l2 protein_coding protein_coding MGP_129S1SvImJ_T0050106.1 MGP_129S1SvImJ_G0024566.1 mouse_genomes_project 18 76539922 76890420 + MGP_129S1SvImJ_P0050106 Zbtb7c protein_coding protein_coding MGP_129S1SvImJ_T0050107.1 MGP_129S1SvImJ_G0024566.1 mouse_genomes_project 18 76790738 76888301 + MGP_129S1SvImJ_P0050107 Zbtb7c protein_coding protein_coding MGP_129S1SvImJ_T0001028.1 MGP_129S1SvImJ_G0000957.1 mouse_genomes_project 18 42856283 42856456 + TEC TEC MGP_129S1SvImJ_T0049052.1 MGP_129S1SvImJ_G0024166.1 mouse_genomes_project 18 10915546 11209830 - MGP_129S1SvImJ_P0049052 Zfp521 protein_coding protein_coding MGP_129S1SvImJ_T0007028.1 MGP_129S1SvImJ_G0005781.1 mouse_genomes_project 18 32986351 32991208 + 2010110K18Rik lincRNA lincRNA MGP_129S1SvImJ_T0007029.1 MGP_129S1SvImJ_G0005781.1 mouse_genomes_project 18 32986454 32993178 + 2010110K18Rik lincRNA lincRNA MGP_129S1SvImJ_T0049120.1 MGP_129S1SvImJ_G0024196.1 mouse_genomes_project 18 21703786 21719401 + MGP_129S1SvImJ_P0049120 Zfp35 protein_coding protein_coding MGP_129S1SvImJ_T0013331.1 MGP_129S1SvImJ_G0011420.1 mouse_genomes_project 18 12310726 12311173 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011478.1 MGP_129S1SvImJ_G0009594.1 mouse_genomes_project 18 39548439 39548713 + Gm22483 misc_RNA misc_RNA MGP_129S1SvImJ_T0001035.1 MGP_129S1SvImJ_G0000964.1 mouse_genomes_project 18 65752467 65753728 + TEC TEC MGP_129S1SvImJ_T0049811.1 MGP_129S1SvImJ_G0024475.1 mouse_genomes_project 18 60962758 60990012 + MGP_129S1SvImJ_P0049811 Csf1r protein_coding protein_coding MGP_129S1SvImJ_T0049812.1 MGP_129S1SvImJ_G0024475.1 mouse_genomes_project 18 60963033 60991027 + MGP_129S1SvImJ_P0049812 Csf1r protein_coding protein_coding MGP_129S1SvImJ_T0048993.1 MGP_129S1SvImJ_G0024149.1 mouse_genomes_project 18 7559845 7569853 + MGP_129S1SvImJ_P0048993 Snrpd1 protein_coding protein_coding MGP_129S1SvImJ_T0049760.1 MGP_129S1SvImJ_G0024458.1 mouse_genomes_project 18 59969593 59979033 + MGP_129S1SvImJ_P0049760 Gm4951 protein_coding protein_coding MGP_129S1SvImJ_T0017664.1 MGP_129S1SvImJ_G0015365.1 mouse_genomes_project 18 49060655 49071543 - C030005K06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017665.1 MGP_129S1SvImJ_G0015365.1 mouse_genomes_project 18 49064090 49071727 - C030005K06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017666.1 MGP_129S1SvImJ_G0015365.1 mouse_genomes_project 18 49070160 49071727 - C030005K06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017667.1 MGP_129S1SvImJ_G0015365.1 mouse_genomes_project 18 49070180 49071488 - C030005K06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0049368.1 MGP_129S1SvImJ_G0024284.1 mouse_genomes_project 18 35093436 35104375 - MGP_129S1SvImJ_P0049368 E230025N22Rik protein_coding protein_coding MGP_129S1SvImJ_T0049763.1 MGP_129S1SvImJ_G0024461.1 mouse_genomes_project 18 60285197 60314633 - MGP_129S1SvImJ_P0049763 Smim3 protein_coding protein_coding MGP_129S1SvImJ_T0007041.1 MGP_129S1SvImJ_G0005791.1 mouse_genomes_project 18 54239838 54331125 + Gm4221 lincRNA lincRNA MGP_129S1SvImJ_T0007042.1 MGP_129S1SvImJ_G0005791.1 mouse_genomes_project 18 54310205 54333202 + Gm4221 lincRNA lincRNA MGP_129S1SvImJ_T0049395.1 MGP_129S1SvImJ_G0024298.1 mouse_genomes_project 18 35366023 36258304 + MGP_129S1SvImJ_P0049395 Gm42416 protein_coding protein_coding MGP_129S1SvImJ_T0007026.1 MGP_129S1SvImJ_G0005780.1 mouse_genomes_project 18 31973231 31974326 + Epb41l4aos lincRNA lincRNA MGP_129S1SvImJ_T0007027.1 MGP_129S1SvImJ_G0005780.1 mouse_genomes_project 18 31973278 31974309 + Epb41l4aos lincRNA lincRNA MGP_129S1SvImJ_T0013371.1 MGP_129S1SvImJ_G0011460.1 mouse_genomes_project 18 91669473 91669692 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049140.1 MGP_129S1SvImJ_G0024203.1 mouse_genomes_project 18 22374292 22410667 + MGP_129S1SvImJ_P0049140 Elp2 protein_coding protein_coding MGP_129S1SvImJ_T0098342.1 MGP_129S1SvImJ_G0036427.1 mouse_genomes_project 18 90647497 90651225 - pseudogene pseudogene MGP_129S1SvImJ_T0013355.1 MGP_129S1SvImJ_G0011444.1 mouse_genomes_project 18 47552078 47553085 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049259.1 MGP_129S1SvImJ_G0024254.1 mouse_genomes_project 18 33148904 33181166 - MGP_129S1SvImJ_P0049259 Etf1 protein_coding protein_coding MGP_129S1SvImJ_T0049260.1 MGP_129S1SvImJ_G0024254.1 mouse_genomes_project 18 33180992 33181100 - MGP_129S1SvImJ_P0049260 Etf1 protein_coding protein_coding MGP_129S1SvImJ_T0049413.1 MGP_129S1SvImJ_G0024310.1 mouse_genomes_project 18 35658429 35661017 + MGP_129S1SvImJ_P0049413 Pcdhb1 protein_coding protein_coding MGP_129S1SvImJ_T0049850.1 MGP_129S1SvImJ_G0024493.1 mouse_genomes_project 18 62550815 62684598 - MGP_129S1SvImJ_P0049850 Spink13 protein_coding protein_coding MGP_129S1SvImJ_T0049238.1 MGP_129S1SvImJ_G0024245.1 mouse_genomes_project 18 32847219 32854809 + MGP_129S1SvImJ_P0049238 Kif20a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049239.1 MGP_129S1SvImJ_G0024245.1 mouse_genomes_project 18 32847230 32854809 + MGP_129S1SvImJ_P0049239 Kif20a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049888.1 MGP_129S1SvImJ_G0024506.1 mouse_genomes_project 18 64989986 65337561 + MGP_129S1SvImJ_P0049888 Nedd4l protein_coding protein_coding MGP_129S1SvImJ_T0049889.1 MGP_129S1SvImJ_G0024506.1 mouse_genomes_project 18 65252655 65332826 + MGP_129S1SvImJ_P0049889 Nedd4l protein_coding protein_coding MGP_129S1SvImJ_T0099590.1 MGP_129S1SvImJ_G0037657.1 mouse_genomes_project 18 9315512 9315630 + Gm25289 snRNA snRNA MGP_129S1SvImJ_T0049190.1 MGP_129S1SvImJ_G0024229.1 mouse_genomes_project 18 30981972 30986392 + MGP_129S1SvImJ_P0049190 Tslp protein_coding protein_coding MGP_129S1SvImJ_T0049337.1 MGP_129S1SvImJ_G0024278.1 mouse_genomes_project 18 34903353 34914220 - MGP_129S1SvImJ_P0049337 Hbegf protein_coding protein_coding MGP_129S1SvImJ_T0050143.1 MGP_129S1SvImJ_G0024573.1 mouse_genomes_project 18 77921249 77922501 - MGP_129S1SvImJ_P0050143 Gm7276 protein_coding protein_coding MGP_129S1SvImJ_T0049572.1 MGP_129S1SvImJ_G0024380.1 mouse_genomes_project 18 41024668 41027379 + MGP_129S1SvImJ_P0049572 Pou4f3 protein_coding protein_coding MGP_129S1SvImJ_T0049686.1 MGP_129S1SvImJ_G0024425.1 mouse_genomes_project 18 50991300 50993132 - MGP_129S1SvImJ_P0049686 Gm4950 protein_coding protein_coding MGP_129S1SvImJ_T0049297.1 MGP_129S1SvImJ_G0024263.1 mouse_genomes_project 18 33929556 33942953 - MGP_129S1SvImJ_P0049297 Slc23a1 protein_coding protein_coding MGP_129S1SvImJ_T0049298.1 MGP_129S1SvImJ_G0024263.1 mouse_genomes_project 18 33934326 33942905 - MGP_129S1SvImJ_P0049298 Slc23a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049299.1 MGP_129S1SvImJ_G0024263.1 mouse_genomes_project 18 33935022 33937571 - Slc23a1 protein_coding processed_transcript MGP_129S1SvImJ_T0049300.1 MGP_129S1SvImJ_G0024263.1 mouse_genomes_project 18 33937788 33942945 - Slc23a1 protein_coding processed_transcript MGP_129S1SvImJ_T0049144.1 MGP_129S1SvImJ_G0024207.1 mouse_genomes_project 18 22932586 22977058 - MGP_129S1SvImJ_P0049144 Tpgs2 protein_coding protein_coding MGP_129S1SvImJ_T0049145.1 MGP_129S1SvImJ_G0024207.1 mouse_genomes_project 18 22941368 22977371 - MGP_129S1SvImJ_P0049145 Tpgs2 protein_coding protein_coding MGP_129S1SvImJ_T0049269.1 MGP_129S1SvImJ_G0024260.1 mouse_genomes_project 18 33855428 33874304 + MGP_129S1SvImJ_P0049269 Gm28285 protein_coding protein_coding MGP_129S1SvImJ_T0049270.1 MGP_129S1SvImJ_G0024260.1 mouse_genomes_project 18 33855432 33888336 + MGP_129S1SvImJ_P0049270 Gm28285 protein_coding protein_coding MGP_129S1SvImJ_T0049271.1 MGP_129S1SvImJ_G0024260.1 mouse_genomes_project 18 33855436 33861503 + Gm28285 protein_coding processed_transcript MGP_129S1SvImJ_T0049272.1 MGP_129S1SvImJ_G0024260.1 mouse_genomes_project 18 33855436 33874004 + Gm28285 protein_coding processed_transcript MGP_129S1SvImJ_T0049273.1 MGP_129S1SvImJ_G0024260.1 mouse_genomes_project 18 33855437 33874227 + MGP_129S1SvImJ_P0049273 Gm28285 protein_coding protein_coding MGP_129S1SvImJ_T0049274.1 MGP_129S1SvImJ_G0024260.1 mouse_genomes_project 18 33855446 33891006 + MGP_129S1SvImJ_P0049274 Gm28285 protein_coding protein_coding MGP_129S1SvImJ_T0049275.1 MGP_129S1SvImJ_G0024260.1 mouse_genomes_project 18 33855462 33873974 + Gm28285 protein_coding processed_transcript MGP_129S1SvImJ_T0049430.1 MGP_129S1SvImJ_G0024324.1 mouse_genomes_project 18 35864576 35869794 + MGP_129S1SvImJ_P0049430 Pcdhb16 protein_coding protein_coding MGP_129S1SvImJ_T0010293.1 MGP_129S1SvImJ_G0008409.1 mouse_genomes_project 18 91109881 91109951 + Gm22694 miRNA miRNA MGP_129S1SvImJ_T0100867.1 MGP_129S1SvImJ_G0038934.1 mouse_genomes_project 18 55530231 55530366 + Gm23555 snoRNA snoRNA MGP_129S1SvImJ_T0049193.1 MGP_129S1SvImJ_G0024231.1 mouse_genomes_project 18 31113441 31361565 + MGP_129S1SvImJ_P0049193 Camk4 protein_coding protein_coding MGP_129S1SvImJ_T0049165.1 MGP_129S1SvImJ_G0024212.1 mouse_genomes_project 18 29534172 29543832 - MGP_129S1SvImJ_P0049165 Syt4 protein_coding protein_coding MGP_129S1SvImJ_T0011472.1 MGP_129S1SvImJ_G0009588.1 mouse_genomes_project 18 23425726 23426036 - Gm25845 misc_RNA misc_RNA MGP_129S1SvImJ_T0003857.1 MGP_129S1SvImJ_G0003460.1 mouse_genomes_project 18 81241214 81244487 + Gm26676 antisense antisense MGP_129S1SvImJ_T0100868.1 MGP_129S1SvImJ_G0038935.1 mouse_genomes_project 18 58148842 58148973 - Gm23270 snoRNA snoRNA MGP_129S1SvImJ_T0049432.1 MGP_129S1SvImJ_G0024326.1 mouse_genomes_project 18 35876221 35881262 + MGP_129S1SvImJ_P0049432 Pcdhb18 protein_coding protein_coding MGP_129S1SvImJ_T0050204.1 MGP_129S1SvImJ_G0024595.1 mouse_genomes_project 18 81208717 81290236 - MGP_129S1SvImJ_P0050204 Kcng2 protein_coding protein_coding MGP_129S1SvImJ_T0050205.1 MGP_129S1SvImJ_G0024595.1 mouse_genomes_project 18 81240559 81289318 - MGP_129S1SvImJ_P0050205 Kcng2 protein_coding protein_coding MGP_129S1SvImJ_T0050206.1 MGP_129S1SvImJ_G0024595.1 mouse_genomes_project 18 81240824 81289632 - MGP_129S1SvImJ_P0050206 Kcng2 protein_coding protein_coding MGP_129S1SvImJ_T0049438.1 MGP_129S1SvImJ_G0024331.1 mouse_genomes_project 18 36039496 36040865 - MGP_129S1SvImJ_P0049438 Slc25a2 protein_coding protein_coding MGP_129S1SvImJ_T0050261.1 MGP_129S1SvImJ_G0024611.1 mouse_genomes_project 18 86104820 86155343 + MGP_129S1SvImJ_P0050261 Fbxo15 protein_coding protein_coding MGP_129S1SvImJ_T0050263.1 MGP_129S1SvImJ_G0024611.1 mouse_genomes_project 18 86122886 86155343 + MGP_129S1SvImJ_P0050263 Fbxo15 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049751.1 MGP_129S1SvImJ_G0024455.1 mouse_genomes_project 18 58413111 58636075 + MGP_129S1SvImJ_P0049751 Adamts19 protein_coding protein_coding MGP_129S1SvImJ_T0003833.1 MGP_129S1SvImJ_G0003445.1 mouse_genomes_project 18 36222329 36224534 - BC037039 antisense antisense MGP_129S1SvImJ_T0049687.1 MGP_129S1SvImJ_G0024426.1 mouse_genomes_project 18 51467351 51468802 + MGP_129S1SvImJ_P0049687 Ftmt protein_coding protein_coding MGP_129S1SvImJ_T0099605.1 MGP_129S1SvImJ_G0037672.1 mouse_genomes_project 18 50719670 50719795 - Gm25785 snRNA snRNA MGP_129S1SvImJ_T0048943.1 MGP_129S1SvImJ_G0024131.1 mouse_genomes_project 18 3488737 3531145 + MGP_129S1SvImJ_P0048943 4921524L21Rik protein_coding protein_coding MGP_129S1SvImJ_T0011470.1 MGP_129S1SvImJ_G0009586.1 mouse_genomes_project 18 18942053 18942163 + Gm24372 misc_RNA misc_RNA MGP_129S1SvImJ_T0049320.1 MGP_129S1SvImJ_G0024273.1 mouse_genomes_project 18 34325879 34379015 + MGP_129S1SvImJ_P0049320 Psd2 protein_coding protein_coding MGP_129S1SvImJ_T0049321.1 MGP_129S1SvImJ_G0024273.1 mouse_genomes_project 18 34326114 34379015 + MGP_129S1SvImJ_P0049321 Psd2 protein_coding protein_coding MGP_129S1SvImJ_T0049322.1 MGP_129S1SvImJ_G0024273.1 mouse_genomes_project 18 34326116 34379018 + MGP_129S1SvImJ_P0049322 Psd2 protein_coding protein_coding MGP_129S1SvImJ_T0049323.1 MGP_129S1SvImJ_G0024273.1 mouse_genomes_project 18 34326151 34378883 + MGP_129S1SvImJ_P0049323 Psd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049324.1 MGP_129S1SvImJ_G0024273.1 mouse_genomes_project 18 34326154 34378977 + MGP_129S1SvImJ_P0049324 Psd2 protein_coding protein_coding MGP_129S1SvImJ_T0049325.1 MGP_129S1SvImJ_G0024273.1 mouse_genomes_project 18 34351114 34370391 + Psd2 protein_coding retained_intron MGP_129S1SvImJ_T0049814.1 MGP_129S1SvImJ_G0024477.1 mouse_genomes_project 18 61058362 61079928 - MGP_129S1SvImJ_P0049814 Slc26a2 protein_coding protein_coding MGP_129S1SvImJ_T0049815.1 MGP_129S1SvImJ_G0024477.1 mouse_genomes_project 18 61065543 61068685 - MGP_129S1SvImJ_P0049815 Slc26a2 protein_coding protein_coding MGP_129S1SvImJ_T0049816.1 MGP_129S1SvImJ_G0024477.1 mouse_genomes_project 18 61070020 61079696 - MGP_129S1SvImJ_P0049816 Slc26a2 protein_coding protein_coding MGP_129S1SvImJ_T0049817.1 MGP_129S1SvImJ_G0024477.1 mouse_genomes_project 18 61075505 61079673 - Slc26a2 protein_coding retained_intron MGP_129S1SvImJ_T0003836.1 MGP_129S1SvImJ_G0003448.1 mouse_genomes_project 18 37775876 37832851 - Gm15336 antisense antisense MGP_129S1SvImJ_T0001029.1 MGP_129S1SvImJ_G0000958.1 mouse_genomes_project 18 44893489 44894091 - TEC TEC MGP_129S1SvImJ_T0013332.1 MGP_129S1SvImJ_G0011421.1 mouse_genomes_project 18 13648896 13655159 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0050096.1 MGP_129S1SvImJ_G0024560.1 mouse_genomes_project 18 75598991 75628314 - MGP_129S1SvImJ_P0050096 Lipg protein_coding protein_coding MGP_129S1SvImJ_T0049379.1 MGP_129S1SvImJ_G0024292.1 mouse_genomes_project 18 35197171 35206338 + Hars2 protein_coding processed_transcript MGP_129S1SvImJ_T0049380.1 MGP_129S1SvImJ_G0024292.1 mouse_genomes_project 18 35197171 35208282 + MGP_129S1SvImJ_P0049380 Hars2 protein_coding protein_coding MGP_129S1SvImJ_T0049381.1 MGP_129S1SvImJ_G0024292.1 mouse_genomes_project 18 35197394 35207414 + MGP_129S1SvImJ_P0049381 Hars2 protein_coding protein_coding MGP_129S1SvImJ_T0049382.1 MGP_129S1SvImJ_G0024292.1 mouse_genomes_project 18 35197432 35200652 + Hars2 protein_coding retained_intron MGP_129S1SvImJ_T0049383.1 MGP_129S1SvImJ_G0024292.1 mouse_genomes_project 18 35202733 35203982 + Hars2 protein_coding retained_intron MGP_129S1SvImJ_T0049384.1 MGP_129S1SvImJ_G0024292.1 mouse_genomes_project 18 35203539 35205879 + Hars2 protein_coding retained_intron MGP_129S1SvImJ_T0049385.1 MGP_129S1SvImJ_G0024292.1 mouse_genomes_project 18 35205732 35207173 + Hars2 protein_coding retained_intron MGP_129S1SvImJ_T0049562.1 MGP_129S1SvImJ_G0024374.1 mouse_genomes_project 18 40582687 40597077 - MGP_129S1SvImJ_P0049562 Grxcr2 protein_coding protein_coding MGP_129S1SvImJ_T0010255.1 MGP_129S1SvImJ_G0008371.1 mouse_genomes_project 18 9920483 9920568 + Mir1948 miRNA miRNA MGP_129S1SvImJ_T0007034.1 MGP_129S1SvImJ_G0005785.1 mouse_genomes_project 18 36672781 36689975 - 1700086O06Rik lincRNA lincRNA MGP_129S1SvImJ_T0007035.1 MGP_129S1SvImJ_G0005785.1 mouse_genomes_project 18 36672781 36689608 - 1700086O06Rik lincRNA lincRNA MGP_129S1SvImJ_T0049107.1 MGP_129S1SvImJ_G0024192.1 mouse_genomes_project 18 21129014 21375999 + MGP_129S1SvImJ_P0049107 Dtna protein_coding protein_coding MGP_129S1SvImJ_T0049108.1 MGP_129S1SvImJ_G0024192.1 mouse_genomes_project 18 21129014 21320557 + MGP_129S1SvImJ_P0049108 Dtna protein_coding protein_coding MGP_129S1SvImJ_T0049109.1 MGP_129S1SvImJ_G0024192.1 mouse_genomes_project 18 21337706 21349560 + MGP_129S1SvImJ_P0049109 Dtna protein_coding unknown_likely_coding MGP_129S1SvImJ_T0017686.1 MGP_129S1SvImJ_G0015371.1 mouse_genomes_project 18 78601613 78604769 - F830208F22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017687.1 MGP_129S1SvImJ_G0015371.1 mouse_genomes_project 18 78601613 78605122 - F830208F22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0049371.1 MGP_129S1SvImJ_G0024287.1 mouse_genomes_project 18 35155366 35157565 - MGP_129S1SvImJ_P0049371 Ndufa2 protein_coding protein_coding MGP_129S1SvImJ_T0098540.1 MGP_129S1SvImJ_G0036625.1 mouse_genomes_project 18 32719732 32719849 + n-R5s24 rRNA rRNA MGP_129S1SvImJ_T0049170.1 MGP_129S1SvImJ_G0024216.1 mouse_genomes_project 18 29877021 29901065 + MGP_129S1SvImJ_P0049170 Ammecr1l protein_coding protein_coding MGP_129S1SvImJ_T0049336.1 MGP_129S1SvImJ_G0024277.1 mouse_genomes_project 18 34795591 34853200 - MGP_129S1SvImJ_P0049336 Pfdn1 protein_coding protein_coding MGP_129S1SvImJ_T0049053.1 MGP_129S1SvImJ_G0024167.1 mouse_genomes_project 18 11706025 11706469 + MGP_129S1SvImJ_P0049053 Gm5160 protein_coding protein_coding MGP_129S1SvImJ_T0049692.1 MGP_129S1SvImJ_G0024430.1 mouse_genomes_project 18 51769641 51788415 + MGP_129S1SvImJ_P0049692 1700034E13Rik protein_coding protein_coding MGP_129S1SvImJ_T0049693.1 MGP_129S1SvImJ_G0024430.1 mouse_genomes_project 18 51769648 51788415 + MGP_129S1SvImJ_P0049693 1700034E13Rik protein_coding protein_coding MGP_129S1SvImJ_T0050256.1 MGP_129S1SvImJ_G0024610.1 mouse_genomes_project 18 86014524 86048021 + MGP_129S1SvImJ_P0050256 Cyb5a protein_coding protein_coding MGP_129S1SvImJ_T0050257.1 MGP_129S1SvImJ_G0024610.1 mouse_genomes_project 18 86014563 86047212 + MGP_129S1SvImJ_P0050257 Cyb5a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050258.1 MGP_129S1SvImJ_G0024610.1 mouse_genomes_project 18 86014593 86039573 + Cyb5a protein_coding retained_intron MGP_129S1SvImJ_T0050259.1 MGP_129S1SvImJ_G0024610.1 mouse_genomes_project 18 86015065 86047482 + MGP_129S1SvImJ_P0050259 Cyb5a protein_coding protein_coding MGP_129S1SvImJ_T0050260.1 MGP_129S1SvImJ_G0024610.1 mouse_genomes_project 18 86045220 86047484 + Cyb5a protein_coding retained_intron MGP_129S1SvImJ_T0050160.1 MGP_129S1SvImJ_G0024579.1 mouse_genomes_project 18 78580463 78589597 + MGP_129S1SvImJ_P0050160 Atp5a1 protein_coding protein_coding MGP_129S1SvImJ_T0050161.1 MGP_129S1SvImJ_G0024579.1 mouse_genomes_project 18 78580690 78589594 + MGP_129S1SvImJ_P0050161 Atp5a1 protein_coding protein_coding MGP_129S1SvImJ_T0050162.1 MGP_129S1SvImJ_G0024579.1 mouse_genomes_project 18 78580726 78589383 + MGP_129S1SvImJ_P0050162 Atp5a1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050163.1 MGP_129S1SvImJ_G0024579.1 mouse_genomes_project 18 78585682 78587827 + Atp5a1 protein_coding retained_intron MGP_129S1SvImJ_T0050164.1 MGP_129S1SvImJ_G0024579.1 mouse_genomes_project 18 78586559 78588617 + Atp5a1 protein_coding retained_intron MGP_129S1SvImJ_T0013327.1 MGP_129S1SvImJ_G0011416.1 mouse_genomes_project 18 9327438 9328096 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049866.1 MGP_129S1SvImJ_G0024498.1 mouse_genomes_project 18 62970775 63394565 - MGP_129S1SvImJ_P0049866 Piezo2 protein_coding protein_coding MGP_129S1SvImJ_T0049867.1 MGP_129S1SvImJ_G0024498.1 mouse_genomes_project 18 62970778 63006399 - MGP_129S1SvImJ_P0049867 Piezo2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049868.1 MGP_129S1SvImJ_G0024498.1 mouse_genomes_project 18 62972110 63227707 - MGP_129S1SvImJ_P0049868 Piezo2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049869.1 MGP_129S1SvImJ_G0024498.1 mouse_genomes_project 18 62983855 63004069 - Piezo2 protein_coding retained_intron MGP_129S1SvImJ_T0049870.1 MGP_129S1SvImJ_G0024498.1 mouse_genomes_project 18 62984302 63009079 - Piezo2 protein_coding retained_intron MGP_129S1SvImJ_T0049871.1 MGP_129S1SvImJ_G0024498.1 mouse_genomes_project 18 63030557 63393839 - MGP_129S1SvImJ_P0049871 Piezo2 protein_coding protein_coding MGP_129S1SvImJ_T0049872.1 MGP_129S1SvImJ_G0024498.1 mouse_genomes_project 18 63050405 63120175 - MGP_129S1SvImJ_P0049872 Piezo2 protein_coding protein_coding MGP_129S1SvImJ_T0049873.1 MGP_129S1SvImJ_G0024498.1 mouse_genomes_project 18 63081140 63159788 - MGP_129S1SvImJ_P0049873 Piezo2 protein_coding protein_coding MGP_129S1SvImJ_T0049874.1 MGP_129S1SvImJ_G0024498.1 mouse_genomes_project 18 63081190 63394565 - MGP_129S1SvImJ_P0049874 Piezo2 protein_coding protein_coding MGP_129S1SvImJ_T0049875.1 MGP_129S1SvImJ_G0024498.1 mouse_genomes_project 18 63095201 63394551 - Piezo2 protein_coding retained_intron MGP_129S1SvImJ_T0049472.1 MGP_129S1SvImJ_G0024353.1 mouse_genomes_project 18 36236722 36259977 + MGP_129S1SvImJ_P0049472 Pcdhgc5 protein_coding protein_coding MGP_129S1SvImJ_T0049473.1 MGP_129S1SvImJ_G0024353.1 mouse_genomes_project 18 36236761 36258155 + MGP_129S1SvImJ_P0049473 Pcdhgc5 protein_coding protein_coding MGP_129S1SvImJ_T0049474.1 MGP_129S1SvImJ_G0024353.1 mouse_genomes_project 18 36236774 36258304 + MGP_129S1SvImJ_P0049474 Pcdhgc5 protein_coding protein_coding MGP_129S1SvImJ_T0049475.1 MGP_129S1SvImJ_G0024353.1 mouse_genomes_project 18 36236862 36258268 + Pcdhgc5 protein_coding retained_intron MGP_129S1SvImJ_T0048967.1 MGP_129S1SvImJ_G0024140.1 mouse_genomes_project 18 6255745 6383982 - MGP_129S1SvImJ_P0048967 Ccny protein_coding protein_coding MGP_129S1SvImJ_T0049461.1 MGP_129S1SvImJ_G0024347.1 mouse_genomes_project 18 36152111 36259977 + MGP_129S1SvImJ_P0049461 Pcdhga10 protein_coding protein_coding MGP_129S1SvImJ_T0100870.1 MGP_129S1SvImJ_G0038937.1 mouse_genomes_project 18 66781665 66781776 - Gm24679 snoRNA snoRNA MGP_129S1SvImJ_T0049597.1 MGP_129S1SvImJ_G0024391.1 mouse_genomes_project 18 42765863 42770193 + MGP_129S1SvImJ_P0049597 Spink14 protein_coding protein_coding MGP_129S1SvImJ_T0049598.1 MGP_129S1SvImJ_G0024391.1 mouse_genomes_project 18 42766688 42770193 + MGP_129S1SvImJ_P0049598 Spink14 protein_coding protein_coding MGP_129S1SvImJ_T0049202.1 MGP_129S1SvImJ_G0024235.1 mouse_genomes_project 18 31974666 32190150 - MGP_129S1SvImJ_P0049202 Epb41l4a protein_coding protein_coding MGP_129S1SvImJ_T0049823.1 MGP_129S1SvImJ_G0024480.1 mouse_genomes_project 18 61381771 61427702 - MGP_129S1SvImJ_P0049823 Arhgef37 protein_coding protein_coding MGP_129S1SvImJ_T0013338.1 MGP_129S1SvImJ_G0011427.1 mouse_genomes_project 18 23656775 23658629 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007050.1 MGP_129S1SvImJ_G0005796.1 mouse_genomes_project 18 63410362 63432868 + Gm26972 lincRNA lincRNA MGP_129S1SvImJ_T0001027.1 MGP_129S1SvImJ_G0000956.1 mouse_genomes_project 18 33883494 33885654 + TEC TEC MGP_129S1SvImJ_T0010269.1 MGP_129S1SvImJ_G0008385.1 mouse_genomes_project 18 55904900 55904960 + Mir1258 miRNA miRNA MGP_129S1SvImJ_T0010278.1 MGP_129S1SvImJ_G0008394.1 mouse_genomes_project 18 61281252 61281318 - Mir378a miRNA miRNA MGP_129S1SvImJ_T0098341.1 MGP_129S1SvImJ_G0036426.1 mouse_genomes_project 18 78515113 78516345 + pseudogene pseudogene MGP_129S1SvImJ_T0049703.1 MGP_129S1SvImJ_G0024434.1 mouse_genomes_project 18 52420756 52569229 + MGP_129S1SvImJ_P0049703 Snx24 protein_coding protein_coding MGP_129S1SvImJ_T0049704.1 MGP_129S1SvImJ_G0024434.1 mouse_genomes_project 18 52420863 52569229 + MGP_129S1SvImJ_P0049704 Snx24 protein_coding protein_coding MGP_129S1SvImJ_T0007009.1 MGP_129S1SvImJ_G0005767.1 mouse_genomes_project 18 2019824 2022638 - Gm26682 lincRNA lincRNA MGP_129S1SvImJ_T0050043.1 MGP_129S1SvImJ_G0024544.1 mouse_genomes_project 18 70984178 70999652 - MGP_129S1SvImJ_P0050043 Poli protein_coding protein_coding MGP_129S1SvImJ_T0050044.1 MGP_129S1SvImJ_G0024544.1 mouse_genomes_project 18 70984181 71000136 - MGP_129S1SvImJ_P0050044 Poli protein_coding protein_coding MGP_129S1SvImJ_T0050045.1 MGP_129S1SvImJ_G0024544.1 mouse_genomes_project 18 70984182 70999948 - MGP_129S1SvImJ_P0050045 Poli protein_coding protein_coding MGP_129S1SvImJ_T0050046.1 MGP_129S1SvImJ_G0024544.1 mouse_genomes_project 18 70984183 70999652 - MGP_129S1SvImJ_P0050046 Poli protein_coding protein_coding MGP_129S1SvImJ_T0050047.1 MGP_129S1SvImJ_G0024544.1 mouse_genomes_project 18 70984185 70999782 - MGP_129S1SvImJ_P0050047 Poli protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0010262.1 MGP_129S1SvImJ_G0008378.1 mouse_genomes_project 18 36272696 36272752 - Mir6979 miRNA miRNA MGP_129S1SvImJ_T0049955.1 MGP_129S1SvImJ_G0024530.1 mouse_genomes_project 18 68101491 68122088 + MGP_129S1SvImJ_P0049955 Seh1l protein_coding protein_coding MGP_129S1SvImJ_T0013359.1 MGP_129S1SvImJ_G0011448.1 mouse_genomes_project 18 55149615 55150593 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049082.1 MGP_129S1SvImJ_G0024182.1 mouse_genomes_project 18 18261314 18261686 - MGP_129S1SvImJ_P0049082 Gm10269 protein_coding protein_coding MGP_129S1SvImJ_T0050179.1 MGP_129S1SvImJ_G0024591.1 mouse_genomes_project 18 81113988 81118743 + Gm16286 protein_coding processed_transcript MGP_129S1SvImJ_T0050181.1 MGP_129S1SvImJ_G0024591.1 mouse_genomes_project 18 81114021 81119983 + MGP_129S1SvImJ_P0050181 Gm16286 protein_coding protein_coding MGP_129S1SvImJ_T0050182.1 MGP_129S1SvImJ_G0024591.1 mouse_genomes_project 18 81114053 81118017 + Gm16286 protein_coding retained_intron MGP_129S1SvImJ_T0050183.1 MGP_129S1SvImJ_G0024591.1 mouse_genomes_project 18 81114069 81115010 + Gm16286 protein_coding retained_intron MGP_129S1SvImJ_T0050185.1 MGP_129S1SvImJ_G0024591.1 mouse_genomes_project 18 81114090 81119974 + MGP_129S1SvImJ_P0050185 Gm16286 protein_coding protein_coding MGP_129S1SvImJ_T0050187.1 MGP_129S1SvImJ_G0024591.1 mouse_genomes_project 18 81114118 81119992 + MGP_129S1SvImJ_P0050187 Gm16286 protein_coding protein_coding MGP_129S1SvImJ_T0050188.1 MGP_129S1SvImJ_G0024591.1 mouse_genomes_project 18 81114136 81114918 + Gm16286 protein_coding retained_intron MGP_129S1SvImJ_T0050189.1 MGP_129S1SvImJ_G0024591.1 mouse_genomes_project 18 81114141 81115010 + Gm16286 protein_coding retained_intron MGP_129S1SvImJ_T0050190.1 MGP_129S1SvImJ_G0024591.1 mouse_genomes_project 18 81114483 81118737 + Gm16286 protein_coding processed_transcript MGP_129S1SvImJ_T0098337.1 MGP_129S1SvImJ_G0036422.1 mouse_genomes_project 18 7083559 7084072 - pseudogene pseudogene MGP_129S1SvImJ_T0001038.1 MGP_129S1SvImJ_G0000967.1 mouse_genomes_project 18 85524507 85527985 - TEC TEC MGP_129S1SvImJ_T0049444.1 MGP_129S1SvImJ_G0024336.1 mouse_genomes_project 18 36082171 36088162 + protein_coding processed_transcript MGP_129S1SvImJ_T0049617.1 MGP_129S1SvImJ_G0024402.1 mouse_genomes_project 18 43593349 43654386 + MGP_129S1SvImJ_P0049617 Ythdc2 protein_coding protein_coding MGP_129S1SvImJ_T0049618.1 MGP_129S1SvImJ_G0024402.1 mouse_genomes_project 18 43614686 43616013 + Ythdc2 protein_coding retained_intron MGP_129S1SvImJ_T0049619.1 MGP_129S1SvImJ_G0024402.1 mouse_genomes_project 18 43621499 43654393 + MGP_129S1SvImJ_P0049619 Ythdc2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049620.1 MGP_129S1SvImJ_G0024402.1 mouse_genomes_project 18 43621689 43622181 + Ythdc2 protein_coding retained_intron MGP_129S1SvImJ_T0003838.1 MGP_129S1SvImJ_G0003450.1 mouse_genomes_project 18 41597067 41600489 + 4933407I08Rik antisense antisense MGP_129S1SvImJ_T0099592.1 MGP_129S1SvImJ_G0037659.1 mouse_genomes_project 18 18441751 18441900 - Gm24959 snRNA snRNA MGP_129S1SvImJ_T0049608.1 MGP_129S1SvImJ_G0024399.1 mouse_genomes_project 18 43075947 43095854 + MGP_129S1SvImJ_P0049608 Myot protein_coding protein_coding MGP_129S1SvImJ_T0049609.1 MGP_129S1SvImJ_G0024399.1 mouse_genomes_project 18 43075947 43095854 + MGP_129S1SvImJ_P0049609 Myot protein_coding protein_coding MGP_129S1SvImJ_T0049405.1 MGP_129S1SvImJ_G0024306.1 mouse_genomes_project 18 35416804 35420127 + Pcdha11 protein_coding retained_intron MGP_129S1SvImJ_T0049406.1 MGP_129S1SvImJ_G0024306.1 mouse_genomes_project 18 35416806 35556274 + Pcdha11 protein_coding retained_intron MGP_129S1SvImJ_T0049407.1 MGP_129S1SvImJ_G0024306.1 mouse_genomes_project 18 35416844 35583235 + MGP_129S1SvImJ_P0049407 Pcdha11 protein_coding protein_coding MGP_129S1SvImJ_T0049408.1 MGP_129S1SvImJ_G0024306.1 mouse_genomes_project 18 35416924 35582966 + MGP_129S1SvImJ_P0049408 Pcdha11 protein_coding protein_coding MGP_129S1SvImJ_T0049409.1 MGP_129S1SvImJ_G0024306.1 mouse_genomes_project 18 35418344 35580796 + MGP_129S1SvImJ_P0049409 Pcdha11 protein_coding protein_coding MGP_129S1SvImJ_T0003843.1 MGP_129S1SvImJ_G0003453.1 mouse_genomes_project 18 56163652 56197375 + Gm15345 antisense antisense MGP_129S1SvImJ_T0017653.1 MGP_129S1SvImJ_G0015361.1 mouse_genomes_project 18 36151677 36162888 - Gm26672 processed_transcript antisense MGP_129S1SvImJ_T0017654.1 MGP_129S1SvImJ_G0015361.1 mouse_genomes_project 18 36159056 36175118 - Gm26672 processed_transcript antisense MGP_129S1SvImJ_T0017655.1 MGP_129S1SvImJ_G0015361.1 mouse_genomes_project 18 36159198 36175819 - Gm26672 processed_transcript antisense MGP_129S1SvImJ_T0017656.1 MGP_129S1SvImJ_G0015361.1 mouse_genomes_project 18 36161751 36163282 - Gm26672 processed_transcript retained_intron MGP_129S1SvImJ_T0010281.1 MGP_129S1SvImJ_G0008397.1 mouse_genomes_project 18 65369796 65369862 + Mir122 miRNA miRNA MGP_129S1SvImJ_T0013329.1 MGP_129S1SvImJ_G0011418.1 mouse_genomes_project 18 9667844 9668618 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049429.1 MGP_129S1SvImJ_G0024323.1 mouse_genomes_project 18 35860304 35863105 + MGP_129S1SvImJ_P0049429 Pcdhb15 protein_coding protein_coding MGP_129S1SvImJ_T0049762.1 MGP_129S1SvImJ_G0024460.1 mouse_genomes_project 18 60043294 60074144 + MGP_129S1SvImJ_P0049762 protein_coding protein_coding MGP_129S1SvImJ_T0011469.1 MGP_129S1SvImJ_G0009585.1 mouse_genomes_project 18 17189464 17189761 + Gm25392 misc_RNA misc_RNA MGP_129S1SvImJ_T0010282.1 MGP_129S1SvImJ_G0008398.1 mouse_genomes_project 18 66422324 66422394 - Mir694 miRNA miRNA MGP_129S1SvImJ_T0010275.1 MGP_129S1SvImJ_G0008391.1 mouse_genomes_project 18 60807662 60807730 + Mir6982 miRNA miRNA MGP_129S1SvImJ_T0100872.1 MGP_129S1SvImJ_G0038939.1 mouse_genomes_project 18 75563430 75563551 - Gm24559 snoRNA snoRNA MGP_129S1SvImJ_T0049268.1 MGP_129S1SvImJ_G0024259.1 mouse_genomes_project 18 33833812 33834181 + MGP_129S1SvImJ_P0049268 Gm5239 protein_coding protein_coding MGP_129S1SvImJ_T0049054.1 MGP_129S1SvImJ_G0024168.1 mouse_genomes_project 18 11906187 11971032 - MGP_129S1SvImJ_P0049054 Ss18 protein_coding protein_coding MGP_129S1SvImJ_T0049055.1 MGP_129S1SvImJ_G0024168.1 mouse_genomes_project 18 11907612 11971001 - MGP_129S1SvImJ_P0049055 Ss18 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049056.1 MGP_129S1SvImJ_G0024168.1 mouse_genomes_project 18 11931269 11971001 - MGP_129S1SvImJ_P0049056 Ss18 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049057.1 MGP_129S1SvImJ_G0024168.1 mouse_genomes_project 18 11936971 11971001 - MGP_129S1SvImJ_P0049057 Ss18 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0003827.1 MGP_129S1SvImJ_G0003439.1 mouse_genomes_project 18 35380823 35381381 - Gm37753 antisense antisense MGP_129S1SvImJ_T0048891.1 MGP_129S1SvImJ_G0024125.1 mouse_genomes_project 18 1762006 1975654 + MGP_129S1SvImJ_P0048891 Svil protein_coding protein_coding MGP_129S1SvImJ_T0048892.1 MGP_129S1SvImJ_G0024125.1 mouse_genomes_project 18 1762033 1903629 + Svil protein_coding retained_intron MGP_129S1SvImJ_T0048893.1 MGP_129S1SvImJ_G0024125.1 mouse_genomes_project 18 1762171 1903545 + Svil protein_coding retained_intron MGP_129S1SvImJ_T0048894.1 MGP_129S1SvImJ_G0024125.1 mouse_genomes_project 18 1839223 1892018 + MGP_129S1SvImJ_P0048894 Svil protein_coding protein_coding MGP_129S1SvImJ_T0048895.1 MGP_129S1SvImJ_G0024125.1 mouse_genomes_project 18 1840028 1974975 + MGP_129S1SvImJ_P0048895 Svil protein_coding protein_coding MGP_129S1SvImJ_T0048896.1 MGP_129S1SvImJ_G0024125.1 mouse_genomes_project 18 1840346 1848388 + Svil protein_coding processed_transcript MGP_129S1SvImJ_T0048897.1 MGP_129S1SvImJ_G0024125.1 mouse_genomes_project 18 1880808 1975657 + MGP_129S1SvImJ_P0048897 Svil protein_coding protein_coding MGP_129S1SvImJ_T0048898.1 MGP_129S1SvImJ_G0024125.1 mouse_genomes_project 18 1885421 1974805 + MGP_129S1SvImJ_P0048898 Svil protein_coding protein_coding MGP_129S1SvImJ_T0048899.1 MGP_129S1SvImJ_G0024125.1 mouse_genomes_project 18 1885423 1974529 + MGP_129S1SvImJ_P0048899 Svil protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048900.1 MGP_129S1SvImJ_G0024125.1 mouse_genomes_project 18 1891715 1975651 + MGP_129S1SvImJ_P0048900 Svil protein_coding protein_coding MGP_129S1SvImJ_T0048901.1 MGP_129S1SvImJ_G0024125.1 mouse_genomes_project 18 1911732 1975654 + MGP_129S1SvImJ_P0048901 Svil protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048902.1 MGP_129S1SvImJ_G0024125.1 mouse_genomes_project 18 1941643 1942779 + Svil protein_coding retained_intron MGP_129S1SvImJ_T0048903.1 MGP_129S1SvImJ_G0024125.1 mouse_genomes_project 18 1955672 1973386 + MGP_129S1SvImJ_P0048903 Svil protein_coding protein_coding MGP_129S1SvImJ_T0048904.1 MGP_129S1SvImJ_G0024125.1 mouse_genomes_project 18 1970627 1975581 + Svil protein_coding retained_intron MGP_129S1SvImJ_T0049466.1 MGP_129S1SvImJ_G0024351.1 mouse_genomes_project 18 36222975 36226355 + Pcdhgc3 protein_coding retained_intron MGP_129S1SvImJ_T0049467.1 MGP_129S1SvImJ_G0024351.1 mouse_genomes_project 18 36223021 36259977 + MGP_129S1SvImJ_P0049467 Pcdhgc3 protein_coding protein_coding MGP_129S1SvImJ_T0049468.1 MGP_129S1SvImJ_G0024351.1 mouse_genomes_project 18 36223027 36259977 + MGP_129S1SvImJ_P0049468 Pcdhgc3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049557.1 MGP_129S1SvImJ_G0024369.1 mouse_genomes_project 18 38325016 38327602 + MGP_129S1SvImJ_P0049557 Pabpc2 protein_coding protein_coding MGP_129S1SvImJ_T0099602.1 MGP_129S1SvImJ_G0037669.1 mouse_genomes_project 18 45735390 45735497 + Gm23610 snRNA snRNA MGP_129S1SvImJ_T0049051.1 MGP_129S1SvImJ_G0024165.1 mouse_genomes_project 18 10232244 10252056 + MGP_129S1SvImJ_P0049051 Hrh4 protein_coding protein_coding MGP_129S1SvImJ_T0049713.1 MGP_129S1SvImJ_G0024440.1 mouse_genomes_project 18 55785507 55864704 + MGP_129S1SvImJ_P0049713 Gramd3 protein_coding protein_coding MGP_129S1SvImJ_T0013363.1 MGP_129S1SvImJ_G0011452.1 mouse_genomes_project 18 69668623 69669458 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013328.1 MGP_129S1SvImJ_G0011417.1 mouse_genomes_project 18 9455005 9457298 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0050065.1 MGP_129S1SvImJ_G0024550.1 mouse_genomes_project 18 74364602 74413914 - MGP_129S1SvImJ_P0050065 Me2 protein_coding protein_coding MGP_129S1SvImJ_T0007010.1 MGP_129S1SvImJ_G0005768.1 mouse_genomes_project 18 7646504 7653511 + 4930563E18Rik lincRNA lincRNA MGP_129S1SvImJ_T0048905.1 MGP_129S1SvImJ_G0024126.1 mouse_genomes_project 18 2064469 2189473 - MGP_129S1SvImJ_P0048905 Zfp438 protein_coding protein_coding MGP_129S1SvImJ_T0048933.1 MGP_129S1SvImJ_G0024129.1 mouse_genomes_project 18 3090293 3131487 - MGP_129S1SvImJ_P0048933 Kif5b protein_coding protein_coding MGP_129S1SvImJ_T0048934.1 MGP_129S1SvImJ_G0024129.1 mouse_genomes_project 18 3092384 3103722 - Kif5b protein_coding retained_intron MGP_129S1SvImJ_T0048935.1 MGP_129S1SvImJ_G0024129.1 mouse_genomes_project 18 3102613 3113153 - Kif5b protein_coding retained_intron MGP_129S1SvImJ_T0048936.1 MGP_129S1SvImJ_G0024129.1 mouse_genomes_project 18 3103750 3131434 - MGP_129S1SvImJ_P0048936 Kif5b protein_coding protein_coding MGP_129S1SvImJ_T0048937.1 MGP_129S1SvImJ_G0024129.1 mouse_genomes_project 18 3109980 3112166 - Kif5b protein_coding retained_intron MGP_129S1SvImJ_T0048938.1 MGP_129S1SvImJ_G0024129.1 mouse_genomes_project 18 3131277 3132137 - Kif5b protein_coding processed_transcript MGP_129S1SvImJ_T0098539.1 MGP_129S1SvImJ_G0036624.1 mouse_genomes_project 18 22461307 22461422 - n-R5s23 rRNA rRNA MGP_129S1SvImJ_T0099621.1 MGP_129S1SvImJ_G0037688.1 mouse_genomes_project 18 83375210 83375340 - Gm25060 snRNA snRNA MGP_129S1SvImJ_T0049319.1 MGP_129S1SvImJ_G0024272.1 mouse_genomes_project 18 34170887 34202667 + MGP_129S1SvImJ_P0049319 Cxxc5 protein_coding protein_coding MGP_129S1SvImJ_T0049561.1 MGP_129S1SvImJ_G0024373.1 mouse_genomes_project 18 40467545 40549927 - MGP_129S1SvImJ_P0049561 Prelid2 protein_coding protein_coding MGP_129S1SvImJ_T0049008.1 MGP_129S1SvImJ_G0024157.1 mouse_genomes_project 18 9320428 9334611 + 3110002H16Rik protein_coding retained_intron MGP_129S1SvImJ_T0049009.1 MGP_129S1SvImJ_G0024157.1 mouse_genomes_project 18 9320428 9344381 + MGP_129S1SvImJ_P0049009 3110002H16Rik protein_coding protein_coding MGP_129S1SvImJ_T0049010.1 MGP_129S1SvImJ_G0024157.1 mouse_genomes_project 18 9320450 9334075 + 3110002H16Rik protein_coding retained_intron MGP_129S1SvImJ_T0049011.1 MGP_129S1SvImJ_G0024157.1 mouse_genomes_project 18 9320463 9344358 + 3110002H16Rik protein_coding retained_intron MGP_129S1SvImJ_T0049012.1 MGP_129S1SvImJ_G0024157.1 mouse_genomes_project 18 9333073 9339316 + MGP_129S1SvImJ_P0049012 3110002H16Rik protein_coding protein_coding MGP_129S1SvImJ_T0049013.1 MGP_129S1SvImJ_G0024157.1 mouse_genomes_project 18 9334028 9342617 + MGP_129S1SvImJ_P0049013 3110002H16Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049014.1 MGP_129S1SvImJ_G0024157.1 mouse_genomes_project 18 9339788 9344358 + 3110002H16Rik protein_coding retained_intron MGP_129S1SvImJ_T0049015.1 MGP_129S1SvImJ_G0024157.1 mouse_genomes_project 18 9340012 9344316 + 3110002H16Rik protein_coding retained_intron MGP_129S1SvImJ_T0049016.1 MGP_129S1SvImJ_G0024157.1 mouse_genomes_project 18 9343388 9344358 + 3110002H16Rik protein_coding retained_intron MGP_129S1SvImJ_T0049403.1 MGP_129S1SvImJ_G0024304.1 mouse_genomes_project 18 35403980 35583235 + MGP_129S1SvImJ_P0049403 Pcdha9 protein_coding protein_coding MGP_129S1SvImJ_T0049806.1 MGP_129S1SvImJ_G0024472.1 mouse_genomes_project 18 60850375 60869220 - MGP_129S1SvImJ_P0049806 Slc6a7 protein_coding protein_coding MGP_129S1SvImJ_T0049240.1 MGP_129S1SvImJ_G0024246.1 mouse_genomes_project 18 32853148 32876138 - MGP_129S1SvImJ_P0049240 Cdc23 protein_coding protein_coding MGP_129S1SvImJ_T0049241.1 MGP_129S1SvImJ_G0024246.1 mouse_genomes_project 18 32853880 32876138 - MGP_129S1SvImJ_P0049241 Cdc23 protein_coding protein_coding MGP_129S1SvImJ_T0049242.1 MGP_129S1SvImJ_G0024246.1 mouse_genomes_project 18 32855859 32856812 - Cdc23 protein_coding retained_intron MGP_129S1SvImJ_T0049243.1 MGP_129S1SvImJ_G0024246.1 mouse_genomes_project 18 32859566 32876121 - Cdc23 protein_coding retained_intron MGP_129S1SvImJ_T0049244.1 MGP_129S1SvImJ_G0024246.1 mouse_genomes_project 18 32859569 32860605 - Cdc23 protein_coding retained_intron MGP_129S1SvImJ_T0049245.1 MGP_129S1SvImJ_G0024246.1 mouse_genomes_project 18 32860571 32861384 - Cdc23 protein_coding retained_intron MGP_129S1SvImJ_T0049246.1 MGP_129S1SvImJ_G0024246.1 mouse_genomes_project 18 32864710 32868633 - Cdc23 protein_coding retained_intron MGP_129S1SvImJ_T0049247.1 MGP_129S1SvImJ_G0024246.1 mouse_genomes_project 18 32871259 32876121 - Cdc23 protein_coding retained_intron MGP_129S1SvImJ_T0049248.1 MGP_129S1SvImJ_G0024246.1 mouse_genomes_project 18 32872105 32876125 - Cdc23 protein_coding retained_intron MGP_129S1SvImJ_T0049942.1 MGP_129S1SvImJ_G0024522.1 mouse_genomes_project 18 67621847 67652064 + MGP_129S1SvImJ_P0049942 Cidea protein_coding protein_coding MGP_129S1SvImJ_T0099598.1 MGP_129S1SvImJ_G0037665.1 mouse_genomes_project 18 32388873 32388935 - Gm23411 snRNA snRNA MGP_129S1SvImJ_T0007036.1 MGP_129S1SvImJ_G0005786.1 mouse_genomes_project 18 43587378 43590669 + Gm43425 lincRNA lincRNA MGP_129S1SvImJ_T0050158.1 MGP_129S1SvImJ_G0024577.1 mouse_genomes_project 18 78426599 78514910 - MGP_129S1SvImJ_P0050158 8030462N17Rik protein_coding protein_coding MGP_129S1SvImJ_T0049489.1 MGP_129S1SvImJ_G0024356.1 mouse_genomes_project 18 36377737 36381840 + MGP_129S1SvImJ_P0049489 Rell2 protein_coding protein_coding MGP_129S1SvImJ_T0049490.1 MGP_129S1SvImJ_G0024356.1 mouse_genomes_project 18 36377746 36381213 + MGP_129S1SvImJ_P0049490 Rell2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049491.1 MGP_129S1SvImJ_G0024356.1 mouse_genomes_project 18 36377806 36381213 + MGP_129S1SvImJ_P0049491 Rell2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049492.1 MGP_129S1SvImJ_G0024356.1 mouse_genomes_project 18 36378255 36380346 + MGP_129S1SvImJ_P0049492 Rell2 protein_coding protein_coding MGP_129S1SvImJ_T0049493.1 MGP_129S1SvImJ_G0024356.1 mouse_genomes_project 18 36378291 36381831 + MGP_129S1SvImJ_P0049493 Rell2 protein_coding protein_coding MGP_129S1SvImJ_T0049494.1 MGP_129S1SvImJ_G0024356.1 mouse_genomes_project 18 36379360 36380707 + Rell2 protein_coding retained_intron MGP_129S1SvImJ_T0049495.1 MGP_129S1SvImJ_G0024356.1 mouse_genomes_project 18 36379401 36380837 + Rell2 protein_coding retained_intron MGP_129S1SvImJ_T0099617.1 MGP_129S1SvImJ_G0037684.1 mouse_genomes_project 18 67439170 67439263 - Gm23512 snRNA snRNA MGP_129S1SvImJ_T0049820.1 MGP_129S1SvImJ_G0024479.1 mouse_genomes_project 18 61181970 61283861 - MGP_129S1SvImJ_P0049820 Ppargc1b protein_coding protein_coding MGP_129S1SvImJ_T0049821.1 MGP_129S1SvImJ_G0024479.1 mouse_genomes_project 18 61182343 61283830 - MGP_129S1SvImJ_P0049821 Ppargc1b protein_coding protein_coding MGP_129S1SvImJ_T0049822.1 MGP_129S1SvImJ_G0024479.1 mouse_genomes_project 18 61273278 61283830 - Ppargc1b protein_coding processed_transcript MGP_129S1SvImJ_T0048945.1 MGP_129S1SvImJ_G0024133.1 mouse_genomes_project 18 3799239 3825736 - Mkx protein_coding processed_transcript MGP_129S1SvImJ_T0048946.1 MGP_129S1SvImJ_G0024133.1 mouse_genomes_project 18 3824081 3899407 - MGP_129S1SvImJ_P0048946 Mkx protein_coding protein_coding MGP_129S1SvImJ_T0048947.1 MGP_129S1SvImJ_G0024133.1 mouse_genomes_project 18 3826066 3887381 - Mkx protein_coding retained_intron MGP_129S1SvImJ_T0048948.1 MGP_129S1SvImJ_G0024133.1 mouse_genomes_project 18 3895042 3898409 - Mkx protein_coding processed_transcript MGP_129S1SvImJ_T0048949.1 MGP_129S1SvImJ_G0024133.1 mouse_genomes_project 18 3896710 3899353 - Mkx protein_coding retained_intron MGP_129S1SvImJ_T0099622.1 MGP_129S1SvImJ_G0037689.1 mouse_genomes_project 18 84432918 84433084 - Gm24720 snRNA snRNA MGP_129S1SvImJ_T0099589.1 MGP_129S1SvImJ_G0037656.1 mouse_genomes_project 18 7089132 7089296 - Gm26244 snRNA snRNA MGP_129S1SvImJ_T0049426.1 MGP_129S1SvImJ_G0024320.1 mouse_genomes_project 18 35828416 35831450 + MGP_129S1SvImJ_P0049426 Pcdhb12 protein_coding protein_coding MGP_129S1SvImJ_T0099604.1 MGP_129S1SvImJ_G0037671.1 mouse_genomes_project 18 50333488 50333595 - Gm25739 snRNA snRNA MGP_129S1SvImJ_T0049435.1 MGP_129S1SvImJ_G0024329.1 mouse_genomes_project 18 35904314 35909019 + MGP_129S1SvImJ_P0049435 Pcdhb21 protein_coding protein_coding MGP_129S1SvImJ_T0048836.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 46039 112777 - MGP_129S1SvImJ_P0048836 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048837.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 46345 124681 - MGP_129S1SvImJ_P0048837 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048838.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 46347 124490 - MGP_129S1SvImJ_P0048838 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048839.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 46347 124591 - MGP_129S1SvImJ_P0048839 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048840.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 46347 79503 - MGP_129S1SvImJ_P0048840 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048841.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 46347 124591 - MGP_129S1SvImJ_P0048841 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048842.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 46347 124591 - MGP_129S1SvImJ_P0048842 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048843.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 46948 61714 - MGP_129S1SvImJ_P0048843 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048844.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 46954 124515 - Crem protein_coding processed_transcript MGP_129S1SvImJ_T0048845.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47252 124750 - MGP_129S1SvImJ_P0048845 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048846.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47255 79500 - MGP_129S1SvImJ_P0048846 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048847.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47381 61692 - MGP_129S1SvImJ_P0048847 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048848.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47414 112693 - MGP_129S1SvImJ_P0048848 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048849.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47505 110660 - MGP_129S1SvImJ_P0048849 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048850.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47525 61077 - MGP_129S1SvImJ_P0048850 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048851.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47537 61023 - MGP_129S1SvImJ_P0048851 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048852.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47549 110664 - MGP_129S1SvImJ_P0048852 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048853.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47563 61714 - MGP_129S1SvImJ_P0048853 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048854.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47566 110660 - MGP_129S1SvImJ_P0048854 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048855.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47576 112693 - MGP_129S1SvImJ_P0048855 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048856.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47576 112693 - MGP_129S1SvImJ_P0048856 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048857.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47576 112693 - MGP_129S1SvImJ_P0048857 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048858.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47576 112693 - MGP_129S1SvImJ_P0048858 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048859.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47576 124535 - MGP_129S1SvImJ_P0048859 Crem protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048860.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47579 110660 - MGP_129S1SvImJ_P0048860 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048861.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47579 90988 - MGP_129S1SvImJ_P0048861 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048862.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47579 90988 - MGP_129S1SvImJ_P0048862 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048863.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47579 91123 - MGP_129S1SvImJ_P0048863 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048864.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47624 61046 - MGP_129S1SvImJ_P0048864 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048865.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47830 110660 - MGP_129S1SvImJ_P0048865 Crem protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048866.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47836 61683 - MGP_129S1SvImJ_P0048866 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048867.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47976 79396 - MGP_129S1SvImJ_P0048867 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048868.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 47976 91165 - MGP_129S1SvImJ_P0048868 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048869.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 63842 79485 - Crem protein_coding processed_transcript MGP_129S1SvImJ_T0048870.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 67576 79500 - Crem protein_coding retained_intron MGP_129S1SvImJ_T0048871.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 67999 79498 - Crem protein_coding processed_transcript MGP_129S1SvImJ_T0048872.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 74132 124591 - MGP_129S1SvImJ_P0048872 Crem protein_coding protein_coding MGP_129S1SvImJ_T0048873.1 MGP_129S1SvImJ_G0024118.1 mouse_genomes_project 18 74429 124576 - MGP_129S1SvImJ_P0048873 Crem protein_coding protein_coding MGP_129S1SvImJ_T0010274.1 MGP_129S1SvImJ_G0008390.1 mouse_genomes_project 18 60803466 60803526 + Mir7220 miRNA miRNA MGP_129S1SvImJ_T0017668.1 MGP_129S1SvImJ_G0015366.1 mouse_genomes_project 18 56799994 56992045 - 4930511M06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017671.1 MGP_129S1SvImJ_G0015366.1 mouse_genomes_project 18 56942672 56991654 - 4930511M06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017675.1 MGP_129S1SvImJ_G0015366.1 mouse_genomes_project 18 56983897 56991757 - 4930511M06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017676.1 MGP_129S1SvImJ_G0015366.1 mouse_genomes_project 18 56984550 56992239 - 4930511M06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017677.1 MGP_129S1SvImJ_G0015366.1 mouse_genomes_project 18 56987640 56992241 - 4930511M06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0049230.1 MGP_129S1SvImJ_G0024244.1 mouse_genomes_project 18 32808766 32846813 - MGP_129S1SvImJ_P0049230 Brd8 protein_coding protein_coding MGP_129S1SvImJ_T0049231.1 MGP_129S1SvImJ_G0024244.1 mouse_genomes_project 18 32808766 32846813 - MGP_129S1SvImJ_P0049231 Brd8 protein_coding protein_coding MGP_129S1SvImJ_T0049232.1 MGP_129S1SvImJ_G0024244.1 mouse_genomes_project 18 32809766 32846765 - Brd8 protein_coding retained_intron MGP_129S1SvImJ_T0049233.1 MGP_129S1SvImJ_G0024244.1 mouse_genomes_project 18 32809795 32846813 - MGP_129S1SvImJ_P0049233 Brd8 protein_coding protein_coding MGP_129S1SvImJ_T0049234.1 MGP_129S1SvImJ_G0024244.1 mouse_genomes_project 18 32811111 32846813 - MGP_129S1SvImJ_P0049234 Brd8 protein_coding protein_coding MGP_129S1SvImJ_T0049235.1 MGP_129S1SvImJ_G0024244.1 mouse_genomes_project 18 32820305 32846813 - Brd8 protein_coding retained_intron MGP_129S1SvImJ_T0049236.1 MGP_129S1SvImJ_G0024244.1 mouse_genomes_project 18 32821282 32846766 - Brd8 protein_coding processed_transcript MGP_129S1SvImJ_T0049237.1 MGP_129S1SvImJ_G0024244.1 mouse_genomes_project 18 32844131 32846813 - Brd8 protein_coding retained_intron MGP_129S1SvImJ_T0049174.1 MGP_129S1SvImJ_G0024219.1 mouse_genomes_project 18 30037400 30040212 - MGP_129S1SvImJ_P0049174 Sft2d3 protein_coding protein_coding MGP_129S1SvImJ_T0049570.1 MGP_129S1SvImJ_G0024379.1 mouse_genomes_project 18 40897671 40967413 + MGP_129S1SvImJ_P0049570 Rbm27 protein_coding protein_coding MGP_129S1SvImJ_T0049571.1 MGP_129S1SvImJ_G0024379.1 mouse_genomes_project 18 40897671 40967413 + MGP_129S1SvImJ_P0049571 Rbm27 protein_coding protein_coding MGP_129S1SvImJ_T0100853.1 MGP_129S1SvImJ_G0038920.1 mouse_genomes_project 18 26288613 26288745 + Gm24246 snoRNA snoRNA MGP_129S1SvImJ_T0001033.1 MGP_129S1SvImJ_G0000962.1 mouse_genomes_project 18 54783598 54784591 - TEC TEC MGP_129S1SvImJ_T0050175.1 MGP_129S1SvImJ_G0024587.1 mouse_genomes_project 18 80939482 81020572 + MGP_129S1SvImJ_P0050175 Pard6g protein_coding protein_coding MGP_129S1SvImJ_T0049573.1 MGP_129S1SvImJ_G0024381.1 mouse_genomes_project 18 41144274 41216686 + MGP_129S1SvImJ_P0049573 Tcerg1 protein_coding protein_coding MGP_129S1SvImJ_T0049574.1 MGP_129S1SvImJ_G0024381.1 mouse_genomes_project 18 41144287 41215979 + MGP_129S1SvImJ_P0049574 Tcerg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049591.1 MGP_129S1SvImJ_G0024388.1 mouse_genomes_project 18 42488044 42491156 + MGP_129S1SvImJ_P0049591 Scgb3a2 protein_coding protein_coding MGP_129S1SvImJ_T0049592.1 MGP_129S1SvImJ_G0024388.1 mouse_genomes_project 18 42488082 42491156 + MGP_129S1SvImJ_P0049592 Scgb3a2 protein_coding protein_coding MGP_129S1SvImJ_T0049593.1 MGP_129S1SvImJ_G0024388.1 mouse_genomes_project 18 42488082 42491156 + MGP_129S1SvImJ_P0049593 Scgb3a2 protein_coding protein_coding MGP_129S1SvImJ_T0098542.1 MGP_129S1SvImJ_G0036627.1 mouse_genomes_project 18 36812787 36812884 + Gm24690 rRNA rRNA MGP_129S1SvImJ_T0049256.1 MGP_129S1SvImJ_G0024252.1 mouse_genomes_project 18 33077322 33084196 + MGP_129S1SvImJ_P0049256 Reep2 protein_coding protein_coding MGP_129S1SvImJ_T0049428.1 MGP_129S1SvImJ_G0024322.1 mouse_genomes_project 18 35840451 35849126 + MGP_129S1SvImJ_P0049428 Pcdhb14 protein_coding protein_coding MGP_129S1SvImJ_T0013361.1 MGP_129S1SvImJ_G0011450.1 mouse_genomes_project 18 59975977 59977180 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049590.1 MGP_129S1SvImJ_G0024387.1 mouse_genomes_project 18 42448373 42459101 - MGP_129S1SvImJ_P0049590 Spink1 protein_coding protein_coding MGP_129S1SvImJ_T0049694.1 MGP_129S1SvImJ_G0024431.1 mouse_genomes_project 18 51821339 51823329 + MGP_129S1SvImJ_P0049694 Gykl1 protein_coding protein_coding MGP_129S1SvImJ_T0049425.1 MGP_129S1SvImJ_G0024319.1 mouse_genomes_project 18 35803044 35807987 + MGP_129S1SvImJ_P0049425 Pcdhb10 protein_coding protein_coding MGP_129S1SvImJ_T0049331.1 MGP_129S1SvImJ_G0024276.1 mouse_genomes_project 18 34737195 34758280 + MGP_129S1SvImJ_P0049331 Cystm1 protein_coding protein_coding MGP_129S1SvImJ_T0049332.1 MGP_129S1SvImJ_G0024276.1 mouse_genomes_project 18 34740235 34794893 + MGP_129S1SvImJ_P0049332 Cystm1 protein_coding protein_coding MGP_129S1SvImJ_T0049333.1 MGP_129S1SvImJ_G0024276.1 mouse_genomes_project 18 34740301 34759815 + Cystm1 protein_coding retained_intron MGP_129S1SvImJ_T0049334.1 MGP_129S1SvImJ_G0024276.1 mouse_genomes_project 18 34740312 34785283 + MGP_129S1SvImJ_P0049334 Cystm1 protein_coding protein_coding MGP_129S1SvImJ_T0049335.1 MGP_129S1SvImJ_G0024276.1 mouse_genomes_project 18 34757340 34794453 + MGP_129S1SvImJ_P0049335 Cystm1 protein_coding protein_coding MGP_129S1SvImJ_T0049813.1 MGP_129S1SvImJ_G0024476.1 mouse_genomes_project 18 60990156 61040989 - MGP_129S1SvImJ_P0049813 Hmgxb3 protein_coding protein_coding MGP_129S1SvImJ_T0013366.1 MGP_129S1SvImJ_G0011455.1 mouse_genomes_project 18 80734138 80735134 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010263.1 MGP_129S1SvImJ_G0008379.1 mouse_genomes_project 18 36397173 36397288 - Mir6981 miRNA miRNA MGP_129S1SvImJ_T0049738.1 MGP_129S1SvImJ_G0024447.1 mouse_genomes_project 18 56552234 56717660 + MGP_129S1SvImJ_P0049738 Megf10 protein_coding protein_coding MGP_129S1SvImJ_T0049739.1 MGP_129S1SvImJ_G0024447.1 mouse_genomes_project 18 56564166 56712911 + MGP_129S1SvImJ_P0049739 Megf10 protein_coding protein_coding MGP_129S1SvImJ_T0013346.1 MGP_129S1SvImJ_G0011435.1 mouse_genomes_project 18 35699765 35701029 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049834.1 MGP_129S1SvImJ_G0024482.1 mouse_genomes_project 18 61588603 61593146 + MGP_129S1SvImJ_P0049834 Il17b protein_coding protein_coding MGP_129S1SvImJ_T0049093.1 MGP_129S1SvImJ_G0024189.1 mouse_genomes_project 18 19453621 19845950 - MGP_129S1SvImJ_P0049093 Ccdc178 protein_coding protein_coding MGP_129S1SvImJ_T0049094.1 MGP_129S1SvImJ_G0024189.1 mouse_genomes_project 18 19454022 19841058 - MGP_129S1SvImJ_P0049094 Ccdc178 protein_coding protein_coding MGP_129S1SvImJ_T0049308.1 MGP_129S1SvImJ_G0024268.1 mouse_genomes_project 18 34033236 34060638 + 1700066B19Rik protein_coding processed_transcript MGP_129S1SvImJ_T0049315.1 MGP_129S1SvImJ_G0024268.1 mouse_genomes_project 18 34057717 34061737 + MGP_129S1SvImJ_P0049315 1700066B19Rik protein_coding protein_coding MGP_129S1SvImJ_T0048970.1 MGP_129S1SvImJ_G0024143.1 mouse_genomes_project 18 6640388 6640862 - MGP_129S1SvImJ_P0048970 Gm17430 protein_coding protein_coding MGP_129S1SvImJ_T0049569.1 MGP_129S1SvImJ_G0024378.1 mouse_genomes_project 18 40820720 40882106 - MGP_129S1SvImJ_P0049569 Lars protein_coding protein_coding MGP_129S1SvImJ_T0049386.1 MGP_129S1SvImJ_G0024293.1 mouse_genomes_project 18 35209644 35216666 + MGP_129S1SvImJ_P0049386 Zmat2 protein_coding protein_coding MGP_129S1SvImJ_T0100874.1 MGP_129S1SvImJ_G0038941.1 mouse_genomes_project 18 75678081 75678146 + Gm23301 snoRNA snoRNA MGP_129S1SvImJ_T0050095.1 MGP_129S1SvImJ_G0024559.1 mouse_genomes_project 18 75426209 75456865 + MGP_129S1SvImJ_P0050095 Acaa2 protein_coding protein_coding MGP_129S1SvImJ_T0011480.1 MGP_129S1SvImJ_G0009596.1 mouse_genomes_project 18 42484847 42485160 + Gm23894 misc_RNA misc_RNA MGP_129S1SvImJ_T0049161.1 MGP_129S1SvImJ_G0024211.1 mouse_genomes_project 18 29042608 29403799 - MGP_129S1SvImJ_P0049161 Rit2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049162.1 MGP_129S1SvImJ_G0024211.1 mouse_genomes_project 18 29043434 29403642 - MGP_129S1SvImJ_P0049162 Rit2 protein_coding protein_coding MGP_129S1SvImJ_T0049163.1 MGP_129S1SvImJ_G0024211.1 mouse_genomes_project 18 29228164 29294366 - Rit2 protein_coding processed_transcript MGP_129S1SvImJ_T0049164.1 MGP_129S1SvImJ_G0024211.1 mouse_genomes_project 18 29286617 29403620 - MGP_129S1SvImJ_P0049164 Rit2 protein_coding protein_coding MGP_129S1SvImJ_T0050081.1 MGP_129S1SvImJ_G0024557.1 mouse_genomes_project 18 74901441 74982542 + MGP_129S1SvImJ_P0050081 Cfap53 protein_coding protein_coding MGP_129S1SvImJ_T0050082.1 MGP_129S1SvImJ_G0024557.1 mouse_genomes_project 18 74901473 74982540 + MGP_129S1SvImJ_P0050082 Cfap53 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050083.1 MGP_129S1SvImJ_G0024557.1 mouse_genomes_project 18 74970342 74982486 + Cfap53 protein_coding processed_transcript MGP_129S1SvImJ_T0011487.1 MGP_129S1SvImJ_G0009603.1 mouse_genomes_project 18 74199727 74199834 + Gm26438 misc_RNA misc_RNA MGP_129S1SvImJ_T0049924.1 MGP_129S1SvImJ_G0024513.1 mouse_genomes_project 18 66123450 66127902 - MGP_129S1SvImJ_P0049924 Rax protein_coding protein_coding MGP_129S1SvImJ_T0049647.1 MGP_129S1SvImJ_G0024417.1 mouse_genomes_project 18 46094964 46142031 - MGP_129S1SvImJ_P0049647 Sema6a protein_coding protein_coding MGP_129S1SvImJ_T0049648.1 MGP_129S1SvImJ_G0024417.1 mouse_genomes_project 18 46104570 46231436 - MGP_129S1SvImJ_P0049648 Sema6a protein_coding protein_coding MGP_129S1SvImJ_T0049649.1 MGP_129S1SvImJ_G0024417.1 mouse_genomes_project 18 46104571 46231474 - MGP_129S1SvImJ_P0049649 Sema6a protein_coding protein_coding MGP_129S1SvImJ_T0049650.1 MGP_129S1SvImJ_G0024417.1 mouse_genomes_project 18 46108306 46231052 - MGP_129S1SvImJ_P0049650 Sema6a protein_coding protein_coding MGP_129S1SvImJ_T0049651.1 MGP_129S1SvImJ_G0024417.1 mouse_genomes_project 18 46108308 46231054 - MGP_129S1SvImJ_P0049651 Sema6a protein_coding protein_coding MGP_129S1SvImJ_T0049652.1 MGP_129S1SvImJ_G0024417.1 mouse_genomes_project 18 46109246 46194536 - MGP_129S1SvImJ_P0049652 Sema6a protein_coding protein_coding MGP_129S1SvImJ_T0049653.1 MGP_129S1SvImJ_G0024417.1 mouse_genomes_project 18 46136477 46231474 - Sema6a protein_coding retained_intron MGP_129S1SvImJ_T0049654.1 MGP_129S1SvImJ_G0024417.1 mouse_genomes_project 18 46136492 46231476 - Sema6a protein_coding retained_intron MGP_129S1SvImJ_T0049655.1 MGP_129S1SvImJ_G0024417.1 mouse_genomes_project 18 46152766 46194514 - MGP_129S1SvImJ_P0049655 Sema6a protein_coding protein_coding MGP_129S1SvImJ_T0049656.1 MGP_129S1SvImJ_G0024417.1 mouse_genomes_project 18 46164544 46230874 - Sema6a protein_coding retained_intron MGP_129S1SvImJ_T0049172.1 MGP_129S1SvImJ_G0024218.1 mouse_genomes_project 18 29922969 30037294 + MGP_129S1SvImJ_P0049172 Wdr33 protein_coding protein_coding MGP_129S1SvImJ_T0049173.1 MGP_129S1SvImJ_G0024218.1 mouse_genomes_project 18 29922969 29964128 + MGP_129S1SvImJ_P0049173 Wdr33 protein_coding protein_coding MGP_129S1SvImJ_T0050214.1 MGP_129S1SvImJ_G0024598.1 mouse_genomes_project 18 81660220 81869587 - MGP_129S1SvImJ_P0050214 Atp9b protein_coding protein_coding MGP_129S1SvImJ_T0050215.1 MGP_129S1SvImJ_G0024598.1 mouse_genomes_project 18 81660461 81869468 - MGP_129S1SvImJ_P0050215 Atp9b protein_coding unknown_likely_coding MGP_129S1SvImJ_T0099620.1 MGP_129S1SvImJ_G0037687.1 mouse_genomes_project 18 81968307 81968436 + Gm25718 snRNA snRNA MGP_129S1SvImJ_T0013340.1 MGP_129S1SvImJ_G0011429.1 mouse_genomes_project 18 28548875 28549250 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007021.1 MGP_129S1SvImJ_G0005775.1 mouse_genomes_project 18 29982704 29986297 - Gm26823 lincRNA lincRNA MGP_129S1SvImJ_T0049449.1 MGP_129S1SvImJ_G0024339.1 mouse_genomes_project 18 36097667 36259977 + MGP_129S1SvImJ_P0049449 Pcdhga5 protein_coding protein_coding MGP_129S1SvImJ_T0049792.1 MGP_129S1SvImJ_G0024469.1 mouse_genomes_project 18 60649743 60689191 - MGP_129S1SvImJ_P0049792 Tcof1 protein_coding protein_coding MGP_129S1SvImJ_T0049793.1 MGP_129S1SvImJ_G0024469.1 mouse_genomes_project 18 60649743 60689149 - MGP_129S1SvImJ_P0049793 Tcof1 protein_coding protein_coding MGP_129S1SvImJ_T0049794.1 MGP_129S1SvImJ_G0024469.1 mouse_genomes_project 18 60651919 60689179 - MGP_129S1SvImJ_P0049794 Tcof1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049795.1 MGP_129S1SvImJ_G0024469.1 mouse_genomes_project 18 60653952 60689138 - MGP_129S1SvImJ_P0049795 Tcof1 protein_coding protein_coding MGP_129S1SvImJ_T0049796.1 MGP_129S1SvImJ_G0024469.1 mouse_genomes_project 18 60663991 60664952 - Tcof1 protein_coding retained_intron MGP_129S1SvImJ_T0049797.1 MGP_129S1SvImJ_G0024469.1 mouse_genomes_project 18 60674805 60688666 - MGP_129S1SvImJ_P0049797 Tcof1 protein_coding protein_coding MGP_129S1SvImJ_T0100880.1 MGP_129S1SvImJ_G0038947.1 mouse_genomes_project 18 91863927 91864056 + Gm25418 snoRNA snoRNA MGP_129S1SvImJ_T0017650.1 MGP_129S1SvImJ_G0015360.1 mouse_genomes_project 18 35555422 35574102 - Gm10544 processed_transcript antisense MGP_129S1SvImJ_T0017651.1 MGP_129S1SvImJ_G0015360.1 mouse_genomes_project 18 35571171 35574086 - Gm10544 processed_transcript antisense MGP_129S1SvImJ_T0017652.1 MGP_129S1SvImJ_G0015360.1 mouse_genomes_project 18 35572332 35574094 - Gm10544 processed_transcript retained_intron MGP_129S1SvImJ_T0050207.1 MGP_129S1SvImJ_G0024596.1 mouse_genomes_project 18 81339849 81402505 - MGP_129S1SvImJ_P0050207 Ctdp1 protein_coding protein_coding MGP_129S1SvImJ_T0050208.1 MGP_129S1SvImJ_G0024596.1 mouse_genomes_project 18 81339855 81372801 - MGP_129S1SvImJ_P0050208 Ctdp1 protein_coding protein_coding MGP_129S1SvImJ_T0050209.1 MGP_129S1SvImJ_G0024596.1 mouse_genomes_project 18 81340626 81372730 - Ctdp1 protein_coding processed_transcript MGP_129S1SvImJ_T0098340.1 MGP_129S1SvImJ_G0036425.1 mouse_genomes_project 18 74923088 74923653 - pseudogene pseudogene MGP_129S1SvImJ_T0099612.1 MGP_129S1SvImJ_G0037679.1 mouse_genomes_project 18 63591963 63592070 + Gm24848 snRNA snRNA MGP_129S1SvImJ_T0007013.1 MGP_129S1SvImJ_G0005770.1 mouse_genomes_project 18 8949647 8968060 - Gm6277 lincRNA lincRNA MGP_129S1SvImJ_T0049410.1 MGP_129S1SvImJ_G0024307.1 mouse_genomes_project 18 35426235 35583235 + MGP_129S1SvImJ_P0049410 Pcdha12 protein_coding protein_coding MGP_129S1SvImJ_T0049141.1 MGP_129S1SvImJ_G0024204.1 mouse_genomes_project 18 22427133 22479193 + MGP_129S1SvImJ_P0049141 Mocos protein_coding protein_coding MGP_129S1SvImJ_T0049842.1 MGP_129S1SvImJ_G0024486.1 mouse_genomes_project 18 61711646 61830626 - MGP_129S1SvImJ_P0049842 Ablim3 protein_coding protein_coding MGP_129S1SvImJ_T0049843.1 MGP_129S1SvImJ_G0024486.1 mouse_genomes_project 18 61711646 61830654 - MGP_129S1SvImJ_P0049843 Ablim3 protein_coding protein_coding MGP_129S1SvImJ_T0049568.1 MGP_129S1SvImJ_G0024377.1 mouse_genomes_project 18 40798883 40814634 - MGP_129S1SvImJ_P0049568 Plac8l1 protein_coding protein_coding MGP_129S1SvImJ_T0049372.1 MGP_129S1SvImJ_G0024288.1 mouse_genomes_project 18 35157663 35170687 + MGP_129S1SvImJ_P0049372 Ik protein_coding protein_coding MGP_129S1SvImJ_T0049373.1 MGP_129S1SvImJ_G0024288.1 mouse_genomes_project 18 35157690 35170690 + MGP_129S1SvImJ_P0049373 Ik protein_coding unknown_likely_coding MGP_129S1SvImJ_T0011473.1 MGP_129S1SvImJ_G0009589.1 mouse_genomes_project 18 30426664 30426972 + Gm22325 misc_RNA misc_RNA MGP_129S1SvImJ_T0049785.1 MGP_129S1SvImJ_G0024467.1 mouse_genomes_project 18 60604587 60608624 + MGP_129S1SvImJ_P0049785 Rps14 protein_coding protein_coding MGP_129S1SvImJ_T0049786.1 MGP_129S1SvImJ_G0024467.1 mouse_genomes_project 18 60604743 60607497 + Rps14 protein_coding retained_intron MGP_129S1SvImJ_T0049787.1 MGP_129S1SvImJ_G0024467.1 mouse_genomes_project 18 60604758 60608619 + MGP_129S1SvImJ_P0049787 Rps14 protein_coding protein_coding MGP_129S1SvImJ_T0049788.1 MGP_129S1SvImJ_G0024467.1 mouse_genomes_project 18 60605306 60607937 + MGP_129S1SvImJ_P0049788 Rps14 protein_coding protein_coding MGP_129S1SvImJ_T0049789.1 MGP_129S1SvImJ_G0024467.1 mouse_genomes_project 18 60605793 60608535 + MGP_129S1SvImJ_P0049789 Rps14 protein_coding protein_coding MGP_129S1SvImJ_T0049790.1 MGP_129S1SvImJ_G0024467.1 mouse_genomes_project 18 60606316 60608623 + MGP_129S1SvImJ_P0049790 Rps14 protein_coding protein_coding MGP_129S1SvImJ_T0048966.1 MGP_129S1SvImJ_G0024139.1 mouse_genomes_project 18 6214311 6218534 - MGP_129S1SvImJ_P0048966 Gjd4 protein_coding protein_coding MGP_129S1SvImJ_T0013360.1 MGP_129S1SvImJ_G0011449.1 mouse_genomes_project 18 55298061 55299067 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049391.1 MGP_129S1SvImJ_G0024296.1 mouse_genomes_project 18 35354388 35583235 + MGP_129S1SvImJ_P0049391 Pcdha3 protein_coding protein_coding MGP_129S1SvImJ_T0099615.1 MGP_129S1SvImJ_G0037682.1 mouse_genomes_project 18 64875234 64875334 - Gm24504 snRNA snRNA MGP_129S1SvImJ_T0049389.1 MGP_129S1SvImJ_G0024295.1 mouse_genomes_project 18 35347488 35583235 + MGP_129S1SvImJ_P0049389 Pcdha2 protein_coding protein_coding MGP_129S1SvImJ_T0049390.1 MGP_129S1SvImJ_G0024295.1 mouse_genomes_project 18 35347507 35582966 + MGP_129S1SvImJ_P0049390 Pcdha2 protein_coding protein_coding MGP_129S1SvImJ_T0099601.1 MGP_129S1SvImJ_G0037668.1 mouse_genomes_project 18 45272811 45272905 - Gm24076 snRNA snRNA MGP_129S1SvImJ_T0049847.1 MGP_129S1SvImJ_G0024490.1 mouse_genomes_project 18 62263703 62408441 + MGP_129S1SvImJ_P0049847 Htr4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0007055.1 MGP_129S1SvImJ_G0005801.1 mouse_genomes_project 18 76499639 76500908 + 1700034B16Rik lincRNA lincRNA MGP_129S1SvImJ_T0050177.1 MGP_129S1SvImJ_G0024589.1 mouse_genomes_project 18 81028397 81053584 - MGP_129S1SvImJ_P0050177 Adnp2 protein_coding protein_coding MGP_129S1SvImJ_T0007046.1 MGP_129S1SvImJ_G0005794.1 mouse_genomes_project 18 61549176 61565538 - Carmn lincRNA lincRNA MGP_129S1SvImJ_T0007047.1 MGP_129S1SvImJ_G0005794.1 mouse_genomes_project 18 61550525 61565585 - Carmn lincRNA lincRNA MGP_129S1SvImJ_T0049750.1 MGP_129S1SvImJ_G0024454.1 mouse_genomes_project 18 58198993 58219838 + MGP_129S1SvImJ_P0049750 Isoc1 protein_coding protein_coding MGP_129S1SvImJ_T0011464.1 MGP_129S1SvImJ_G0009580.1 mouse_genomes_project 18 658174 658497 + Gm24632 misc_RNA misc_RNA MGP_129S1SvImJ_T0049600.1 MGP_129S1SvImJ_G0024393.1 mouse_genomes_project 18 42840087 42844224 + MGP_129S1SvImJ_P0049600 Spink12 protein_coding protein_coding MGP_129S1SvImJ_T0001030.1 MGP_129S1SvImJ_G0000959.1 mouse_genomes_project 18 44988606 44989317 + TEC TEC MGP_129S1SvImJ_T0011489.1 MGP_129S1SvImJ_G0009605.1 mouse_genomes_project 18 85898726 85899016 - Gm22014 misc_RNA misc_RNA MGP_129S1SvImJ_T0049732.1 MGP_129S1SvImJ_G0024445.1 mouse_genomes_project 18 56155651 56328001 - MGP_129S1SvImJ_P0049732 March3 protein_coding protein_coding MGP_129S1SvImJ_T0049733.1 MGP_129S1SvImJ_G0024445.1 mouse_genomes_project 18 56169801 56207713 - MGP_129S1SvImJ_P0049733 March3 protein_coding protein_coding MGP_129S1SvImJ_T0049734.1 MGP_129S1SvImJ_G0024445.1 mouse_genomes_project 18 56199355 56327968 - March3 protein_coding retained_intron MGP_129S1SvImJ_T0013344.1 MGP_129S1SvImJ_G0011433.1 mouse_genomes_project 18 35089775 35091605 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049845.1 MGP_129S1SvImJ_G0024488.1 mouse_genomes_project 18 62120636 62122781 - MGP_129S1SvImJ_P0049845 Adrb2 protein_coding protein_coding MGP_129S1SvImJ_T0003824.1 MGP_129S1SvImJ_G0003436.1 mouse_genomes_project 18 21461037 21462895 - Gm15972 antisense antisense MGP_129S1SvImJ_T0048968.1 MGP_129S1SvImJ_G0024141.1 mouse_genomes_project 18 6541355 6545199 - MGP_129S1SvImJ_P0048968 Cetn1 protein_coding protein_coding MGP_129S1SvImJ_T0099613.1 MGP_129S1SvImJ_G0037680.1 mouse_genomes_project 18 63939085 63939160 - Gm24384 snRNA snRNA MGP_129S1SvImJ_T0049416.1 MGP_129S1SvImJ_G0024312.1 mouse_genomes_project 18 35695135 35698817 + MGP_129S1SvImJ_P0049416 Pcdhb3 protein_coding protein_coding MGP_129S1SvImJ_T0049401.1 MGP_129S1SvImJ_G0024302.1 mouse_genomes_project 18 35386623 35583235 + MGP_129S1SvImJ_P0049401 Pcdha7 protein_coding protein_coding MGP_129S1SvImJ_T0049747.1 MGP_129S1SvImJ_G0024452.1 mouse_genomes_project 18 57493814 57707668 - MGP_129S1SvImJ_P0049747 Fbn2 protein_coding protein_coding MGP_129S1SvImJ_T0049748.1 MGP_129S1SvImJ_G0024452.1 mouse_genomes_project 18 57495447 57707547 - MGP_129S1SvImJ_P0049748 Fbn2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049450.1 MGP_129S1SvImJ_G0024340.1 mouse_genomes_project 18 36110219 36259977 + MGP_129S1SvImJ_P0049450 Pcdhga6 protein_coding protein_coding MGP_129S1SvImJ_T0098547.1 MGP_129S1SvImJ_G0036632.1 mouse_genomes_project 18 74113860 74114008 - n-R5-8s1 rRNA rRNA MGP_129S1SvImJ_T0010292.1 MGP_129S1SvImJ_G0008408.1 mouse_genomes_project 18 90315551 90315632 + Mir6359 miRNA miRNA MGP_129S1SvImJ_T0011488.1 MGP_129S1SvImJ_G0009604.1 mouse_genomes_project 18 78615378 78615731 - Gm23954 misc_RNA misc_RNA MGP_129S1SvImJ_T0100857.1 MGP_129S1SvImJ_G0038924.1 mouse_genomes_project 18 31973503 31973635 + Gm23639 snoRNA snoRNA MGP_129S1SvImJ_T0049710.1 MGP_129S1SvImJ_G0024438.1 mouse_genomes_project 18 53059302 53156965 + MGP_129S1SvImJ_P0049710 Csnk1g3 protein_coding protein_coding MGP_129S1SvImJ_T0049711.1 MGP_129S1SvImJ_G0024438.1 mouse_genomes_project 18 53063620 53154580 + MGP_129S1SvImJ_P0049711 Csnk1g3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0010285.1 MGP_129S1SvImJ_G0008401.1 mouse_genomes_project 18 69418704 69418779 - Mir145b miRNA miRNA MGP_129S1SvImJ_T0013353.1 MGP_129S1SvImJ_G0011442.1 mouse_genomes_project 18 43846311 43847300 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0050108.1 MGP_129S1SvImJ_G0024567.1 mouse_genomes_project 18 76989536 77055568 + MGP_129S1SvImJ_P0050108 Smad2 protein_coding protein_coding MGP_129S1SvImJ_T0050109.1 MGP_129S1SvImJ_G0024567.1 mouse_genomes_project 18 76989657 77054567 + MGP_129S1SvImJ_P0050109 Smad2 protein_coding protein_coding MGP_129S1SvImJ_T0050110.1 MGP_129S1SvImJ_G0024567.1 mouse_genomes_project 18 76989837 77059910 + MGP_129S1SvImJ_P0050110 Smad2 protein_coding protein_coding MGP_129S1SvImJ_T0050111.1 MGP_129S1SvImJ_G0024567.1 mouse_genomes_project 18 76990002 77048287 + MGP_129S1SvImJ_P0050111 Smad2 protein_coding protein_coding MGP_129S1SvImJ_T0050112.1 MGP_129S1SvImJ_G0024567.1 mouse_genomes_project 18 77009844 77055131 + MGP_129S1SvImJ_P0050112 Smad2 protein_coding protein_coding MGP_129S1SvImJ_T0050113.1 MGP_129S1SvImJ_G0024567.1 mouse_genomes_project 18 77011217 77049674 + MGP_129S1SvImJ_P0050113 Smad2 protein_coding protein_coding MGP_129S1SvImJ_T0050114.1 MGP_129S1SvImJ_G0024567.1 mouse_genomes_project 18 77011217 77052479 + MGP_129S1SvImJ_P0050114 Smad2 protein_coding protein_coding MGP_129S1SvImJ_T0049338.1 MGP_129S1SvImJ_G0024279.1 mouse_genomes_project 18 34926547 34939661 + MGP_129S1SvImJ_P0049338 Slc4a9 protein_coding protein_coding MGP_129S1SvImJ_T0049339.1 MGP_129S1SvImJ_G0024279.1 mouse_genomes_project 18 34926547 34939661 + MGP_129S1SvImJ_P0049339 Slc4a9 protein_coding protein_coding MGP_129S1SvImJ_T0007052.1 MGP_129S1SvImJ_G0005798.1 mouse_genomes_project 18 68100327 68101473 - Gm26910 lincRNA lincRNA MGP_129S1SvImJ_T0049220.1 MGP_129S1SvImJ_G0024239.1 mouse_genomes_project 18 32615398 32647896 + MGP_129S1SvImJ_P0049220 Pkd2l2 protein_coding protein_coding MGP_129S1SvImJ_T0049221.1 MGP_129S1SvImJ_G0024239.1 mouse_genomes_project 18 32615398 32648889 + MGP_129S1SvImJ_P0049221 Pkd2l2 protein_coding protein_coding MGP_129S1SvImJ_T0049877.1 MGP_129S1SvImJ_G0024500.1 mouse_genomes_project 18 63717030 64018365 + MGP_129S1SvImJ_P0049877 Wdr7 protein_coding protein_coding MGP_129S1SvImJ_T0017638.1 MGP_129S1SvImJ_G0015358.1 mouse_genomes_project 18 2352118 2465438 - Gm10125 processed_transcript antisense MGP_129S1SvImJ_T0017639.1 MGP_129S1SvImJ_G0015358.1 mouse_genomes_project 18 2379149 2381839 - Gm10125 processed_transcript retained_intron MGP_129S1SvImJ_T0017640.1 MGP_129S1SvImJ_G0015358.1 mouse_genomes_project 18 2386052 2465438 - Gm10125 processed_transcript processed_transcript MGP_129S1SvImJ_T0017641.1 MGP_129S1SvImJ_G0015358.1 mouse_genomes_project 18 2386124 2465236 - Gm10125 processed_transcript antisense MGP_129S1SvImJ_T0017642.1 MGP_129S1SvImJ_G0015358.1 mouse_genomes_project 18 2434144 2465427 - Gm10125 processed_transcript antisense MGP_129S1SvImJ_T0017643.1 MGP_129S1SvImJ_G0015358.1 mouse_genomes_project 18 2434144 2466555 - Gm10125 processed_transcript antisense MGP_129S1SvImJ_T0017644.1 MGP_129S1SvImJ_G0015358.1 mouse_genomes_project 18 2445402 2465235 - Gm10125 processed_transcript antisense MGP_129S1SvImJ_T0049038.1 MGP_129S1SvImJ_G0024163.1 mouse_genomes_project 18 9960669 10030717 - MGP_129S1SvImJ_P0049038 Osbpl1a protein_coding protein_coding MGP_129S1SvImJ_T0049039.1 MGP_129S1SvImJ_G0024163.1 mouse_genomes_project 18 9961523 10095307 - MGP_129S1SvImJ_P0049039 Osbpl1a protein_coding protein_coding MGP_129S1SvImJ_T0049040.1 MGP_129S1SvImJ_G0024163.1 mouse_genomes_project 18 9961546 10164138 - MGP_129S1SvImJ_P0049040 Osbpl1a protein_coding protein_coding MGP_129S1SvImJ_T0049041.1 MGP_129S1SvImJ_G0024163.1 mouse_genomes_project 18 9968885 9973551 - Osbpl1a protein_coding retained_intron MGP_129S1SvImJ_T0049042.1 MGP_129S1SvImJ_G0024163.1 mouse_genomes_project 18 9973216 10072225 - MGP_129S1SvImJ_P0049042 Osbpl1a protein_coding protein_coding MGP_129S1SvImJ_T0049043.1 MGP_129S1SvImJ_G0024163.1 mouse_genomes_project 18 9975259 10104705 - Osbpl1a protein_coding retained_intron MGP_129S1SvImJ_T0049044.1 MGP_129S1SvImJ_G0024163.1 mouse_genomes_project 18 9979413 10078049 - MGP_129S1SvImJ_P0049044 Osbpl1a protein_coding protein_coding MGP_129S1SvImJ_T0049045.1 MGP_129S1SvImJ_G0024163.1 mouse_genomes_project 18 10079185 10164274 - Osbpl1a protein_coding retained_intron MGP_129S1SvImJ_T0049046.1 MGP_129S1SvImJ_G0024163.1 mouse_genomes_project 18 10114953 10164210 - MGP_129S1SvImJ_P0049046 Osbpl1a protein_coding protein_coding MGP_129S1SvImJ_T0049047.1 MGP_129S1SvImJ_G0024163.1 mouse_genomes_project 18 10123293 10164239 - MGP_129S1SvImJ_P0049047 Osbpl1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049048.1 MGP_129S1SvImJ_G0024163.1 mouse_genomes_project 18 10144089 10164225 - Osbpl1a protein_coding retained_intron MGP_129S1SvImJ_T0049049.1 MGP_129S1SvImJ_G0024163.1 mouse_genomes_project 18 10149730 10164222 - Osbpl1a protein_coding processed_transcript MGP_129S1SvImJ_T0049603.1 MGP_129S1SvImJ_G0024395.1 mouse_genomes_project 18 42906917 42914585 - MGP_129S1SvImJ_P0049603 Spinkl protein_coding protein_coding MGP_129S1SvImJ_T0049252.1 MGP_129S1SvImJ_G0024250.1 mouse_genomes_project 18 32993398 33008239 + MGP_129S1SvImJ_P0049252 Fam53c protein_coding protein_coding MGP_129S1SvImJ_T0049253.1 MGP_129S1SvImJ_G0024250.1 mouse_genomes_project 18 32994048 33008217 + MGP_129S1SvImJ_P0049253 Fam53c protein_coding protein_coding MGP_129S1SvImJ_T0048880.1 MGP_129S1SvImJ_G0024120.1 mouse_genomes_project 18 299712 308160 + MGP_129S1SvImJ_P0048880 Bambi protein_coding protein_coding MGP_129S1SvImJ_T0013368.1 MGP_129S1SvImJ_G0011457.1 mouse_genomes_project 18 90909150 90909475 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007053.1 MGP_129S1SvImJ_G0005799.1 mouse_genomes_project 18 74620178 74622364 + D730045A05Rik lincRNA lincRNA MGP_129S1SvImJ_T0049290.1 MGP_129S1SvImJ_G0024262.1 mouse_genomes_project 18 33911803 33932139 + MGP_129S1SvImJ_P0049290 Paip2 protein_coding protein_coding MGP_129S1SvImJ_T0049291.1 MGP_129S1SvImJ_G0024262.1 mouse_genomes_project 18 33911810 33931303 + MGP_129S1SvImJ_P0049291 Paip2 protein_coding protein_coding MGP_129S1SvImJ_T0049292.1 MGP_129S1SvImJ_G0024262.1 mouse_genomes_project 18 33911827 33931472 + MGP_129S1SvImJ_P0049292 Paip2 protein_coding protein_coding MGP_129S1SvImJ_T0049293.1 MGP_129S1SvImJ_G0024262.1 mouse_genomes_project 18 33911835 33932136 + MGP_129S1SvImJ_P0049293 Paip2 protein_coding protein_coding MGP_129S1SvImJ_T0049294.1 MGP_129S1SvImJ_G0024262.1 mouse_genomes_project 18 33912423 33931348 + MGP_129S1SvImJ_P0049294 Paip2 protein_coding protein_coding MGP_129S1SvImJ_T0049295.1 MGP_129S1SvImJ_G0024262.1 mouse_genomes_project 18 33923460 33928378 + Paip2 protein_coding retained_intron MGP_129S1SvImJ_T0049296.1 MGP_129S1SvImJ_G0024262.1 mouse_genomes_project 18 33924161 33928827 + Paip2 protein_coding retained_intron MGP_129S1SvImJ_T0003832.1 MGP_129S1SvImJ_G0003444.1 mouse_genomes_project 18 36118292 36130117 - Gm37165 antisense antisense MGP_129S1SvImJ_T0011474.1 MGP_129S1SvImJ_G0009590.1 mouse_genomes_project 18 35218873 35219016 + Vaultrc5 misc_RNA misc_RNA MGP_129S1SvImJ_T0049582.1 MGP_129S1SvImJ_G0024384.1 mouse_genomes_project 18 41883149 42017431 + MGP_129S1SvImJ_P0049582 Stk32a protein_coding protein_coding MGP_129S1SvImJ_T0048972.1 MGP_129S1SvImJ_G0024145.1 mouse_genomes_project 18 6924744 6960925 - MGP_129S1SvImJ_P0048972 Usp14 protein_coding protein_coding MGP_129S1SvImJ_T0048973.1 MGP_129S1SvImJ_G0024145.1 mouse_genomes_project 18 6924906 6960851 - MGP_129S1SvImJ_P0048973 Usp14 protein_coding protein_coding MGP_129S1SvImJ_T0048974.1 MGP_129S1SvImJ_G0024145.1 mouse_genomes_project 18 6926212 6929865 - Usp14 protein_coding retained_intron MGP_129S1SvImJ_T0048975.1 MGP_129S1SvImJ_G0024145.1 mouse_genomes_project 18 6931116 6939875 - Usp14 protein_coding retained_intron MGP_129S1SvImJ_T0048976.1 MGP_129S1SvImJ_G0024145.1 mouse_genomes_project 18 6940811 6960865 - Usp14 protein_coding retained_intron MGP_129S1SvImJ_T0048977.1 MGP_129S1SvImJ_G0024145.1 mouse_genomes_project 18 6943457 6948216 - Usp14 protein_coding retained_intron MGP_129S1SvImJ_T0048978.1 MGP_129S1SvImJ_G0024145.1 mouse_genomes_project 18 6954932 6960806 - Usp14 protein_coding retained_intron MGP_129S1SvImJ_T0049604.1 MGP_129S1SvImJ_G0024396.1 mouse_genomes_project 18 42930646 42936772 - MGP_129S1SvImJ_P0049604 Spink11 protein_coding protein_coding MGP_129S1SvImJ_T0049605.1 MGP_129S1SvImJ_G0024396.1 mouse_genomes_project 18 42931056 42932947 - Spink11 protein_coding retained_intron MGP_129S1SvImJ_T0007015.1 MGP_129S1SvImJ_G0005772.1 mouse_genomes_project 18 14402210 14529885 + 1700001G01Rik lincRNA lincRNA MGP_129S1SvImJ_T0007016.1 MGP_129S1SvImJ_G0005772.1 mouse_genomes_project 18 14402235 14432837 + 1700001G01Rik lincRNA lincRNA MGP_129S1SvImJ_T0007017.1 MGP_129S1SvImJ_G0005772.1 mouse_genomes_project 18 14418697 14529885 + 1700001G01Rik lincRNA lincRNA MGP_129S1SvImJ_T0007018.1 MGP_129S1SvImJ_G0005772.1 mouse_genomes_project 18 14518121 14529841 + 1700001G01Rik lincRNA lincRNA MGP_129S1SvImJ_T0049851.1 MGP_129S1SvImJ_G0024494.1 mouse_genomes_project 18 62580515 62595578 + Spink10 protein_coding processed_transcript MGP_129S1SvImJ_T0049852.1 MGP_129S1SvImJ_G0024494.1 mouse_genomes_project 18 62584343 62597869 + MGP_129S1SvImJ_P0049852 Spink10 protein_coding protein_coding MGP_129S1SvImJ_T0049853.1 MGP_129S1SvImJ_G0024494.1 mouse_genomes_project 18 62584710 62586610 + Spink10 protein_coding processed_transcript MGP_129S1SvImJ_T0049854.1 MGP_129S1SvImJ_G0024494.1 mouse_genomes_project 18 62584764 62589511 + Spink10 protein_coding processed_transcript MGP_129S1SvImJ_T0049695.1 MGP_129S1SvImJ_G0024432.1 mouse_genomes_project 18 51904435 51976004 + MGP_129S1SvImJ_P0049695 Sncaip protein_coding protein_coding MGP_129S1SvImJ_T0049696.1 MGP_129S1SvImJ_G0024432.1 mouse_genomes_project 18 51974181 52058662 + MGP_129S1SvImJ_P0049696 Sncaip protein_coding protein_coding MGP_129S1SvImJ_T0049697.1 MGP_129S1SvImJ_G0024432.1 mouse_genomes_project 18 51975927 52058666 + MGP_129S1SvImJ_P0049697 Sncaip protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049698.1 MGP_129S1SvImJ_G0024432.1 mouse_genomes_project 18 51975927 52058666 + MGP_129S1SvImJ_P0049698 Sncaip protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049699.1 MGP_129S1SvImJ_G0024432.1 mouse_genomes_project 18 51975927 52058372 + MGP_129S1SvImJ_P0049699 Sncaip protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049700.1 MGP_129S1SvImJ_G0024432.1 mouse_genomes_project 18 51975973 52058098 + MGP_129S1SvImJ_P0049700 Sncaip protein_coding protein_coding MGP_129S1SvImJ_T0049701.1 MGP_129S1SvImJ_G0024432.1 mouse_genomes_project 18 51975973 52058098 + MGP_129S1SvImJ_P0049701 Sncaip protein_coding protein_coding MGP_129S1SvImJ_T0049434.1 MGP_129S1SvImJ_G0024328.1 mouse_genomes_project 18 35893178 35898510 + MGP_129S1SvImJ_P0049434 Pcdhb20 protein_coding protein_coding MGP_129S1SvImJ_T0100851.1 MGP_129S1SvImJ_G0038918.1 mouse_genomes_project 18 20850031 20850157 + Gm22495 snoRNA snoRNA MGP_129S1SvImJ_T0049213.1 MGP_129S1SvImJ_G0024237.1 mouse_genomes_project 18 32531447 32536947 + Srp19 protein_coding processed_transcript MGP_129S1SvImJ_T0049214.1 MGP_129S1SvImJ_G0024237.1 mouse_genomes_project 18 32531723 32537123 + Srp19 protein_coding processed_transcript MGP_129S1SvImJ_T0049215.1 MGP_129S1SvImJ_G0024237.1 mouse_genomes_project 18 32531745 32537153 + Srp19 protein_coding retained_intron MGP_129S1SvImJ_T0049216.1 MGP_129S1SvImJ_G0024237.1 mouse_genomes_project 18 32531745 32537201 + MGP_129S1SvImJ_P0049216 Srp19 protein_coding protein_coding MGP_129S1SvImJ_T0049217.1 MGP_129S1SvImJ_G0024237.1 mouse_genomes_project 18 32531758 32537023 + MGP_129S1SvImJ_P0049217 Srp19 protein_coding protein_coding MGP_129S1SvImJ_T0049218.1 MGP_129S1SvImJ_G0024237.1 mouse_genomes_project 18 32531776 32537155 + MGP_129S1SvImJ_P0049218 Srp19 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049228.1 MGP_129S1SvImJ_G0024243.1 mouse_genomes_project 18 32789983 32807624 - MGP_129S1SvImJ_P0049228 4933408B17Rik protein_coding protein_coding MGP_129S1SvImJ_T0049229.1 MGP_129S1SvImJ_G0024243.1 mouse_genomes_project 18 32790082 32807501 - MGP_129S1SvImJ_P0049229 4933408B17Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049818.1 MGP_129S1SvImJ_G0024478.1 mouse_genomes_project 18 61091341 61173772 + MGP_129S1SvImJ_P0049818 Pde6a protein_coding protein_coding MGP_129S1SvImJ_T0049819.1 MGP_129S1SvImJ_G0024478.1 mouse_genomes_project 18 61153796 61173772 + MGP_129S1SvImJ_P0049819 Pde6a protein_coding protein_coding MGP_129S1SvImJ_T0049261.1 MGP_129S1SvImJ_G0024255.1 mouse_genomes_project 18 33188204 33206281 - MGP_129S1SvImJ_P0049261 Hspa9 protein_coding protein_coding MGP_129S1SvImJ_T0049262.1 MGP_129S1SvImJ_G0024255.1 mouse_genomes_project 18 33189057 33190101 - Hspa9 protein_coding retained_intron MGP_129S1SvImJ_T0049263.1 MGP_129S1SvImJ_G0024255.1 mouse_genomes_project 18 33189486 33191653 - Hspa9 protein_coding retained_intron MGP_129S1SvImJ_T0049264.1 MGP_129S1SvImJ_G0024255.1 mouse_genomes_project 18 33198947 33203499 - Hspa9 protein_coding retained_intron MGP_129S1SvImJ_T0101655.1 MGP_129S1SvImJ_G0039684.1 mouse_genomes_project 18 35474376 35476118 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101656.1 MGP_129S1SvImJ_G0039684.1 mouse_genomes_project 18 35475881 35476818 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0003829.1 MGP_129S1SvImJ_G0003441.1 mouse_genomes_project 18 35567701 35568140 - Gm38097 antisense antisense MGP_129S1SvImJ_T0049223.1 MGP_129S1SvImJ_G0024241.1 mouse_genomes_project 18 32750397 32756351 + MGP_129S1SvImJ_P0049223 Wnt8a protein_coding protein_coding MGP_129S1SvImJ_T0100869.1 MGP_129S1SvImJ_G0038936.1 mouse_genomes_project 18 63536875 63537019 + Gm22210 snoRNA snoRNA MGP_129S1SvImJ_T0007059.1 MGP_129S1SvImJ_G0005805.1 mouse_genomes_project 18 83911749 83926399 + 4930445N18Rik lincRNA lincRNA MGP_129S1SvImJ_T0007060.1 MGP_129S1SvImJ_G0005805.1 mouse_genomes_project 18 83911752 83915022 + 4930445N18Rik lincRNA lincRNA MGP_129S1SvImJ_T0049276.1 MGP_129S1SvImJ_G0024261.1 mouse_genomes_project 18 33864170 33874509 + MGP_129S1SvImJ_P0049276 Matr3 protein_coding protein_coding MGP_129S1SvImJ_T0049277.1 MGP_129S1SvImJ_G0024261.1 mouse_genomes_project 18 33864182 33907022 + MGP_129S1SvImJ_P0049277 Matr3 protein_coding protein_coding MGP_129S1SvImJ_T0049278.1 MGP_129S1SvImJ_G0024261.1 mouse_genomes_project 18 33864216 33874142 + MGP_129S1SvImJ_P0049278 Matr3 protein_coding protein_coding MGP_129S1SvImJ_T0049279.1 MGP_129S1SvImJ_G0024261.1 mouse_genomes_project 18 33864241 33902851 + MGP_129S1SvImJ_P0049279 Matr3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049280.1 MGP_129S1SvImJ_G0024261.1 mouse_genomes_project 18 33864323 33902759 + MGP_129S1SvImJ_P0049280 Matr3 protein_coding protein_coding MGP_129S1SvImJ_T0049281.1 MGP_129S1SvImJ_G0024261.1 mouse_genomes_project 18 33864469 33902968 + MGP_129S1SvImJ_P0049281 Matr3 protein_coding protein_coding MGP_129S1SvImJ_T0049282.1 MGP_129S1SvImJ_G0024261.1 mouse_genomes_project 18 33864477 33902694 + MGP_129S1SvImJ_P0049282 Matr3 protein_coding protein_coding MGP_129S1SvImJ_T0049283.1 MGP_129S1SvImJ_G0024261.1 mouse_genomes_project 18 33864511 33888405 + MGP_129S1SvImJ_P0049283 Matr3 protein_coding protein_coding MGP_129S1SvImJ_T0049284.1 MGP_129S1SvImJ_G0024261.1 mouse_genomes_project 18 33864707 33874222 + MGP_129S1SvImJ_P0049284 Matr3 protein_coding protein_coding MGP_129S1SvImJ_T0049285.1 MGP_129S1SvImJ_G0024261.1 mouse_genomes_project 18 33864713 33888690 + MGP_129S1SvImJ_P0049285 Matr3 protein_coding protein_coding MGP_129S1SvImJ_T0049286.1 MGP_129S1SvImJ_G0024261.1 mouse_genomes_project 18 33873950 33882295 + Matr3 protein_coding retained_intron MGP_129S1SvImJ_T0049287.1 MGP_129S1SvImJ_G0024261.1 mouse_genomes_project 18 33881259 33900106 + MGP_129S1SvImJ_P0049287 Matr3 protein_coding protein_coding MGP_129S1SvImJ_T0049288.1 MGP_129S1SvImJ_G0024261.1 mouse_genomes_project 18 33886488 33888673 + Matr3 protein_coding retained_intron MGP_129S1SvImJ_T0049289.1 MGP_129S1SvImJ_G0024261.1 mouse_genomes_project 18 33888423 33890123 + Matr3 protein_coding retained_intron MGP_129S1SvImJ_T0049741.1 MGP_129S1SvImJ_G0024449.1 mouse_genomes_project 18 56903578 56913107 + MGP_129S1SvImJ_P0049741 Ctxn3 protein_coding protein_coding MGP_129S1SvImJ_T0013335.1 MGP_129S1SvImJ_G0011424.1 mouse_genomes_project 18 18961595 18961895 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0050078.1 MGP_129S1SvImJ_G0024555.1 mouse_genomes_project 18 74837898 74843259 + MGP_129S1SvImJ_P0050078 Cxxc1 protein_coding protein_coding MGP_129S1SvImJ_T0099588.1 MGP_129S1SvImJ_G0037655.1 mouse_genomes_project 18 6677151 6677254 - Gm23350 snRNA snRNA MGP_129S1SvImJ_T0050252.1 MGP_129S1SvImJ_G0024609.1 mouse_genomes_project 18 85881994 85892322 + MGP_129S1SvImJ_P0050252 Fam69c protein_coding protein_coding MGP_129S1SvImJ_T0050253.1 MGP_129S1SvImJ_G0024609.1 mouse_genomes_project 18 85882217 85902062 + MGP_129S1SvImJ_P0050253 Fam69c protein_coding protein_coding MGP_129S1SvImJ_T0050254.1 MGP_129S1SvImJ_G0024609.1 mouse_genomes_project 18 85882252 85901040 + Fam69c protein_coding processed_transcript MGP_129S1SvImJ_T0050255.1 MGP_129S1SvImJ_G0024609.1 mouse_genomes_project 18 85882858 85892099 + Fam69c protein_coding processed_transcript MGP_129S1SvImJ_T0049058.1 MGP_129S1SvImJ_G0024169.1 mouse_genomes_project 18 11998671 12050622 + MGP_129S1SvImJ_P0049058 Psma8 protein_coding protein_coding MGP_129S1SvImJ_T0049524.1 MGP_129S1SvImJ_G0024366.1 mouse_genomes_project 18 37076967 37130178 + Arhgap26 protein_coding processed_transcript MGP_129S1SvImJ_T0049525.1 MGP_129S1SvImJ_G0024366.1 mouse_genomes_project 18 37077036 37286784 + Arhgap26 protein_coding processed_transcript MGP_129S1SvImJ_T0049526.1 MGP_129S1SvImJ_G0024366.1 mouse_genomes_project 18 37108171 37127186 + Arhgap26 protein_coding processed_transcript MGP_129S1SvImJ_T0049527.1 MGP_129S1SvImJ_G0024366.1 mouse_genomes_project 18 37165534 37273717 + Arhgap26 protein_coding processed_transcript MGP_129S1SvImJ_T0049528.1 MGP_129S1SvImJ_G0024366.1 mouse_genomes_project 18 37165534 37630455 + MGP_129S1SvImJ_P0049528 Arhgap26 protein_coding protein_coding MGP_129S1SvImJ_T0049536.1 MGP_129S1SvImJ_G0024366.1 mouse_genomes_project 18 37396537 37487380 + Arhgap26 protein_coding processed_transcript MGP_129S1SvImJ_T0049537.1 MGP_129S1SvImJ_G0024366.1 mouse_genomes_project 18 37396825 37448395 + MGP_129S1SvImJ_P0049537 Arhgap26 protein_coding protein_coding MGP_129S1SvImJ_T0049538.1 MGP_129S1SvImJ_G0024366.1 mouse_genomes_project 18 37471813 37487043 + Arhgap26 protein_coding processed_transcript MGP_129S1SvImJ_T0049539.1 MGP_129S1SvImJ_G0024366.1 mouse_genomes_project 18 37510523 37619278 + Arhgap26 protein_coding retained_intron MGP_129S1SvImJ_T0049540.1 MGP_129S1SvImJ_G0024366.1 mouse_genomes_project 18 37510523 37911035 + MGP_129S1SvImJ_P0049540 Arhgap26 protein_coding protein_coding MGP_129S1SvImJ_T0049541.1 MGP_129S1SvImJ_G0024366.1 mouse_genomes_project 18 37510854 37905963 + MGP_129S1SvImJ_P0049541 Arhgap26 protein_coding protein_coding MGP_129S1SvImJ_T0049542.1 MGP_129S1SvImJ_G0024366.1 mouse_genomes_project 18 37618439 37646484 + Arhgap26 protein_coding processed_transcript MGP_129S1SvImJ_T0049543.1 MGP_129S1SvImJ_G0024366.1 mouse_genomes_project 18 37754898 37907301 + MGP_129S1SvImJ_P0049543 Arhgap26 protein_coding protein_coding MGP_129S1SvImJ_T0049544.1 MGP_129S1SvImJ_G0024366.1 mouse_genomes_project 18 37816737 37911035 + MGP_129S1SvImJ_P0049544 Arhgap26 protein_coding protein_coding MGP_129S1SvImJ_T0049545.1 MGP_129S1SvImJ_G0024366.1 mouse_genomes_project 18 37821603 37837537 + Arhgap26 protein_coding processed_transcript MGP_129S1SvImJ_T0049546.1 MGP_129S1SvImJ_G0024366.1 mouse_genomes_project 18 37826945 37894486 + MGP_129S1SvImJ_P0049546 Arhgap26 protein_coding protein_coding MGP_129S1SvImJ_T0049547.1 MGP_129S1SvImJ_G0024366.1 mouse_genomes_project 18 37826945 37905930 + MGP_129S1SvImJ_P0049547 Arhgap26 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049548.1 MGP_129S1SvImJ_G0024366.1 mouse_genomes_project 18 37897370 37901856 + Arhgap26 protein_coding processed_transcript MGP_129S1SvImJ_T0049940.1 MGP_129S1SvImJ_G0024520.1 mouse_genomes_project 18 67491982 67515043 - MGP_129S1SvImJ_P0049940 Mppe1 protein_coding protein_coding MGP_129S1SvImJ_T0098544.1 MGP_129S1SvImJ_G0036629.1 mouse_genomes_project 18 63512858 63512978 + Gm22560 rRNA rRNA MGP_129S1SvImJ_T0049004.1 MGP_129S1SvImJ_G0024154.1 mouse_genomes_project 18 8968528 9083868 + MGP_129S1SvImJ_P0049004 Cables1 protein_coding protein_coding MGP_129S1SvImJ_T0049824.1 MGP_129S1SvImJ_G0024481.1 mouse_genomes_project 18 61449710 61486693 + MGP_129S1SvImJ_P0049824 Csnk1a1 protein_coding protein_coding MGP_129S1SvImJ_T0049825.1 MGP_129S1SvImJ_G0024481.1 mouse_genomes_project 18 61449749 61484937 + MGP_129S1SvImJ_P0049825 Csnk1a1 protein_coding protein_coding MGP_129S1SvImJ_T0049826.1 MGP_129S1SvImJ_G0024481.1 mouse_genomes_project 18 61449754 61478754 + MGP_129S1SvImJ_P0049826 Csnk1a1 protein_coding protein_coding MGP_129S1SvImJ_T0049827.1 MGP_129S1SvImJ_G0024481.1 mouse_genomes_project 18 61449754 61482269 + MGP_129S1SvImJ_P0049827 Csnk1a1 protein_coding protein_coding MGP_129S1SvImJ_T0049828.1 MGP_129S1SvImJ_G0024481.1 mouse_genomes_project 18 61449764 61478900 + MGP_129S1SvImJ_P0049828 Csnk1a1 protein_coding protein_coding MGP_129S1SvImJ_T0049829.1 MGP_129S1SvImJ_G0024481.1 mouse_genomes_project 18 61449771 61452677 + Csnk1a1 protein_coding retained_intron MGP_129S1SvImJ_T0049830.1 MGP_129S1SvImJ_G0024481.1 mouse_genomes_project 18 61449775 61484815 + MGP_129S1SvImJ_P0049830 Csnk1a1 protein_coding protein_coding MGP_129S1SvImJ_T0049831.1 MGP_129S1SvImJ_G0024481.1 mouse_genomes_project 18 61450125 61484165 + MGP_129S1SvImJ_P0049831 Csnk1a1 protein_coding protein_coding MGP_129S1SvImJ_T0049832.1 MGP_129S1SvImJ_G0024481.1 mouse_genomes_project 18 61471455 61478756 + MGP_129S1SvImJ_P0049832 Csnk1a1 protein_coding protein_coding MGP_129S1SvImJ_T0049833.1 MGP_129S1SvImJ_G0024481.1 mouse_genomes_project 18 61479481 61483132 + Csnk1a1 protein_coding processed_transcript MGP_129S1SvImJ_T0049436.1 MGP_129S1SvImJ_G0024330.1 mouse_genomes_project 18 35908564 35915956 + MGP_129S1SvImJ_P0049436 Pcdhb22 protein_coding protein_coding MGP_129S1SvImJ_T0049437.1 MGP_129S1SvImJ_G0024330.1 mouse_genomes_project 18 35909053 35912622 + MGP_129S1SvImJ_P0049437 Pcdhb22 protein_coding protein_coding MGP_129S1SvImJ_T0013347.1 MGP_129S1SvImJ_G0011436.1 mouse_genomes_project 18 35827038 35827909 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049392.1 MGP_129S1SvImJ_G0024297.1 mouse_genomes_project 18 35360931 35583235 + MGP_129S1SvImJ_P0049392 Pcdha4 protein_coding protein_coding MGP_129S1SvImJ_T0049393.1 MGP_129S1SvImJ_G0024297.1 mouse_genomes_project 18 35360941 35368834 + Pcdha4 protein_coding retained_intron MGP_129S1SvImJ_T0049394.1 MGP_129S1SvImJ_G0024297.1 mouse_genomes_project 18 35360958 35583239 + MGP_129S1SvImJ_P0049394 Pcdha4 protein_coding protein_coding MGP_129S1SvImJ_T0049309.1 MGP_129S1SvImJ_G0024269.1 mouse_genomes_project 18 34043095 34051914 - MGP_129S1SvImJ_P0049309 Ecscr protein_coding protein_coding MGP_129S1SvImJ_T0049310.1 MGP_129S1SvImJ_G0024269.1 mouse_genomes_project 18 34043095 34051083 - MGP_129S1SvImJ_P0049310 Ecscr protein_coding protein_coding MGP_129S1SvImJ_T0049311.1 MGP_129S1SvImJ_G0024269.1 mouse_genomes_project 18 34043282 34047300 - MGP_129S1SvImJ_P0049311 Ecscr protein_coding protein_coding MGP_129S1SvImJ_T0049312.1 MGP_129S1SvImJ_G0024269.1 mouse_genomes_project 18 34043769 34047300 - MGP_129S1SvImJ_P0049312 Ecscr protein_coding protein_coding MGP_129S1SvImJ_T0049313.1 MGP_129S1SvImJ_G0024269.1 mouse_genomes_project 18 34047257 34047897 - Ecscr protein_coding processed_transcript MGP_129S1SvImJ_T0049314.1 MGP_129S1SvImJ_G0024269.1 mouse_genomes_project 18 34047524 34051851 - Ecscr protein_coding processed_transcript MGP_129S1SvImJ_T0048987.1 MGP_129S1SvImJ_G0024148.1 mouse_genomes_project 18 7506695 7552429 - MGP_129S1SvImJ_P0048987 Esco1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048988.1 MGP_129S1SvImJ_G0024148.1 mouse_genomes_project 18 7507718 7536031 - Esco1 protein_coding processed_transcript MGP_129S1SvImJ_T0048989.1 MGP_129S1SvImJ_G0024148.1 mouse_genomes_project 18 7507727 7552188 - MGP_129S1SvImJ_P0048989 Esco1 protein_coding protein_coding MGP_129S1SvImJ_T0048990.1 MGP_129S1SvImJ_G0024148.1 mouse_genomes_project 18 7507735 7552411 - MGP_129S1SvImJ_P0048990 Esco1 protein_coding protein_coding MGP_129S1SvImJ_T0048991.1 MGP_129S1SvImJ_G0024148.1 mouse_genomes_project 18 7507735 7552168 - MGP_129S1SvImJ_P0048991 Esco1 protein_coding protein_coding MGP_129S1SvImJ_T0048992.1 MGP_129S1SvImJ_G0024148.1 mouse_genomes_project 18 7507746 7552168 - Esco1 protein_coding processed_transcript MGP_129S1SvImJ_T0049455.1 MGP_129S1SvImJ_G0024343.1 mouse_genomes_project 18 36129701 36259977 + MGP_129S1SvImJ_P0049455 Pcdhga8 protein_coding protein_coding MGP_129S1SvImJ_T0049633.1 MGP_129S1SvImJ_G0024408.1 mouse_genomes_project 18 45370358 45386057 - MGP_129S1SvImJ_P0049633 Ticam2 protein_coding protein_coding MGP_129S1SvImJ_T0049635.1 MGP_129S1SvImJ_G0024408.1 mouse_genomes_project 18 45382736 45386057 - Ticam2 protein_coding retained_intron MGP_129S1SvImJ_T0049683.1 MGP_129S1SvImJ_G0024422.1 mouse_genomes_project 18 49309305 49313956 + MGP_129S1SvImJ_P0049683 Fam170a protein_coding protein_coding MGP_129S1SvImJ_T0049355.1 MGP_129S1SvImJ_G0024281.1 mouse_genomes_project 18 35072395 35074253 + MGP_129S1SvImJ_P0049355 Eif4ebp3 protein_coding protein_coding MGP_129S1SvImJ_T0100877.1 MGP_129S1SvImJ_G0038944.1 mouse_genomes_project 18 80418755 80418876 - Gm25824 snoRNA snoRNA MGP_129S1SvImJ_T0049507.1 MGP_129S1SvImJ_G0024359.1 mouse_genomes_project 18 36619555 36645687 - MGP_129S1SvImJ_P0049507 Pcdh1 protein_coding protein_coding MGP_129S1SvImJ_T0049508.1 MGP_129S1SvImJ_G0024359.1 mouse_genomes_project 18 36622528 36636805 - MGP_129S1SvImJ_P0049508 Pcdh1 protein_coding protein_coding MGP_129S1SvImJ_T0049509.1 MGP_129S1SvImJ_G0024359.1 mouse_genomes_project 18 36630331 36643401 - MGP_129S1SvImJ_P0049509 Pcdh1 protein_coding protein_coding MGP_129S1SvImJ_T0049510.1 MGP_129S1SvImJ_G0024359.1 mouse_genomes_project 18 36630331 36645611 - MGP_129S1SvImJ_P0049510 Pcdh1 protein_coding protein_coding MGP_129S1SvImJ_T0049511.1 MGP_129S1SvImJ_G0024359.1 mouse_genomes_project 18 36637085 36644193 - MGP_129S1SvImJ_P0049511 Pcdh1 protein_coding protein_coding MGP_129S1SvImJ_T0049512.1 MGP_129S1SvImJ_G0024359.1 mouse_genomes_project 18 36637085 36637482 - MGP_129S1SvImJ_P0049512 Pcdh1 protein_coding protein_coding MGP_129S1SvImJ_T0010264.1 MGP_129S1SvImJ_G0008380.1 mouse_genomes_project 18 36413576 36413635 - Mir6980 miRNA miRNA MGP_129S1SvImJ_T0049370.1 MGP_129S1SvImJ_G0024286.1 mouse_genomes_project 18 35147303 35155423 + MGP_129S1SvImJ_P0049370 Tmco6 protein_coding protein_coding MGP_129S1SvImJ_T0011475.1 MGP_129S1SvImJ_G0009591.1 mouse_genomes_project 18 37069603 37069674 + Gm27369 misc_RNA misc_RNA MGP_129S1SvImJ_T0017680.1 MGP_129S1SvImJ_G0015369.1 mouse_genomes_project 18 67596777 67605008 - B430212C06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017681.1 MGP_129S1SvImJ_G0015369.1 mouse_genomes_project 18 67596777 67622387 - B430212C06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017682.1 MGP_129S1SvImJ_G0015369.1 mouse_genomes_project 18 67596957 67621867 - B430212C06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017683.1 MGP_129S1SvImJ_G0015369.1 mouse_genomes_project 18 67598586 67605187 - B430212C06Rik processed_transcript retained_intron MGP_129S1SvImJ_T0017684.1 MGP_129S1SvImJ_G0015369.1 mouse_genomes_project 18 67598599 67605247 - B430212C06Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0010249.1 MGP_129S1SvImJ_G0008365.1 mouse_genomes_project 18 5636584 5636688 - Gm26119 miRNA miRNA MGP_129S1SvImJ_T0049932.1 MGP_129S1SvImJ_G0024516.1 mouse_genomes_project 18 66237087 66499866 - Ccbe1 protein_coding processed_transcript MGP_129S1SvImJ_T0049933.1 MGP_129S1SvImJ_G0024516.1 mouse_genomes_project 18 66251201 66500208 - MGP_129S1SvImJ_P0049933 Ccbe1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049934.1 MGP_129S1SvImJ_G0024516.1 mouse_genomes_project 18 66255306 66500258 - MGP_129S1SvImJ_P0049934 Ccbe1 protein_coding protein_coding MGP_129S1SvImJ_T0049935.1 MGP_129S1SvImJ_G0024516.1 mouse_genomes_project 18 66477895 66514399 - Ccbe1 protein_coding processed_transcript MGP_129S1SvImJ_T0049660.1 MGP_129S1SvImJ_G0024419.1 mouse_genomes_project 18 48836055 48976205 + MGP_129S1SvImJ_P0049660 Dmxl1 protein_coding protein_coding MGP_129S1SvImJ_T0049661.1 MGP_129S1SvImJ_G0024419.1 mouse_genomes_project 18 48836382 48977424 + MGP_129S1SvImJ_P0049661 Dmxl1 protein_coding protein_coding MGP_129S1SvImJ_T0049662.1 MGP_129S1SvImJ_G0024419.1 mouse_genomes_project 18 48836475 48974210 + MGP_129S1SvImJ_P0049662 Dmxl1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049663.1 MGP_129S1SvImJ_G0024419.1 mouse_genomes_project 18 48900463 48943003 + Dmxl1 protein_coding retained_intron MGP_129S1SvImJ_T0049664.1 MGP_129S1SvImJ_G0024419.1 mouse_genomes_project 18 48960818 48966101 + Dmxl1 protein_coding retained_intron MGP_129S1SvImJ_T0049665.1 MGP_129S1SvImJ_G0024419.1 mouse_genomes_project 18 48967573 48971218 + Dmxl1 protein_coding retained_intron MGP_129S1SvImJ_T0049639.1 MGP_129S1SvImJ_G0024411.1 mouse_genomes_project 18 45531147 45550480 - MGP_129S1SvImJ_P0049639 Cdo1 protein_coding protein_coding MGP_129S1SvImJ_T0001036.1 MGP_129S1SvImJ_G0000965.1 mouse_genomes_project 18 81217702 81219223 - TEC TEC MGP_129S1SvImJ_T0049076.1 MGP_129S1SvImJ_G0024178.1 mouse_genomes_project 18 17993731 18030359 + MGP_129S1SvImJ_P0049076 Dsg4 protein_coding protein_coding MGP_129S1SvImJ_T0050269.1 MGP_129S1SvImJ_G0024615.1 mouse_genomes_project 18 89990904 90090203 - protein_coding processed_transcript MGP_129S1SvImJ_T0050270.1 MGP_129S1SvImJ_G0024615.1 mouse_genomes_project 18 89994367 90235621 - protein_coding processed_transcript MGP_129S1SvImJ_T0050271.1 MGP_129S1SvImJ_G0024615.1 mouse_genomes_project 18 90203529 90235604 - MGP_129S1SvImJ_P0050271 protein_coding protein_coding MGP_129S1SvImJ_T0050272.1 MGP_129S1SvImJ_G0024615.1 mouse_genomes_project 18 90208652 90227319 - MGP_129S1SvImJ_P0050272 protein_coding protein_coding MGP_129S1SvImJ_T0050273.1 MGP_129S1SvImJ_G0024615.1 mouse_genomes_project 18 90209246 90273039 - MGP_129S1SvImJ_P0050273 protein_coding protein_coding MGP_129S1SvImJ_T0017663.1 MGP_129S1SvImJ_G0015364.1 mouse_genomes_project 18 48740771 48742168 + Gm16283 processed_transcript processed_transcript MGP_129S1SvImJ_T0098846.1 MGP_129S1SvImJ_G0036925.1 mouse_genomes_project 18 2443241 2445473 - Gm26575 sense_intronic sense_intronic MGP_129S1SvImJ_T0011477.1 MGP_129S1SvImJ_G0009593.1 mouse_genomes_project 18 39390113 39390418 - Gm22515 misc_RNA misc_RNA MGP_129S1SvImJ_T0049369.1 MGP_129S1SvImJ_G0024285.1 mouse_genomes_project 18 35136142 35137809 - MGP_129S1SvImJ_P0049369 Cd14 protein_coding protein_coding MGP_129S1SvImJ_T0017657.1 MGP_129S1SvImJ_G0015362.1 mouse_genomes_project 18 36241087 36258304 + Gm38182 processed_transcript processed_transcript MGP_129S1SvImJ_T0017658.1 MGP_129S1SvImJ_G0015362.1 mouse_genomes_project 18 36241356 36258162 + Gm38182 processed_transcript processed_transcript MGP_129S1SvImJ_T0017659.1 MGP_129S1SvImJ_G0015362.1 mouse_genomes_project 18 36241567 36258483 + Gm38182 processed_transcript processed_transcript MGP_129S1SvImJ_T0017660.1 MGP_129S1SvImJ_G0015362.1 mouse_genomes_project 18 36241652 36258486 + Gm38182 processed_transcript processed_transcript MGP_129S1SvImJ_T0017661.1 MGP_129S1SvImJ_G0015362.1 mouse_genomes_project 18 36241944 36258484 + Gm38182 processed_transcript processed_transcript MGP_129S1SvImJ_T0013350.1 MGP_129S1SvImJ_G0011439.1 mouse_genomes_project 18 37270341 37271193 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049712.1 MGP_129S1SvImJ_G0024439.1 mouse_genomes_project 18 54126352 54239733 - MGP_129S1SvImJ_P0049712 Zfp608 protein_coding protein_coding MGP_129S1SvImJ_T0099599.1 MGP_129S1SvImJ_G0037666.1 mouse_genomes_project 18 36740174 36740277 + Gm23205 snRNA snRNA MGP_129S1SvImJ_T0049404.1 MGP_129S1SvImJ_G0024305.1 mouse_genomes_project 18 35411297 35583235 + MGP_129S1SvImJ_P0049404 Pcdha11 protein_coding protein_coding MGP_129S1SvImJ_T0049007.1 MGP_129S1SvImJ_G0024156.1 mouse_genomes_project 18 9278687 9309523 + MGP_129S1SvImJ_P0049007 Riok3 protein_coding protein_coding MGP_129S1SvImJ_T0049387.1 MGP_129S1SvImJ_G0024294.1 mouse_genomes_project 18 35337895 35583239 + MGP_129S1SvImJ_P0049387 Pcdha1 protein_coding protein_coding MGP_129S1SvImJ_T0049388.1 MGP_129S1SvImJ_G0024294.1 mouse_genomes_project 18 35337996 35583235 + MGP_129S1SvImJ_P0049388 Pcdha1 protein_coding protein_coding MGP_129S1SvImJ_T0001025.1 MGP_129S1SvImJ_G0000954.1 mouse_genomes_project 18 2460038 2463702 - TEC TEC MGP_129S1SvImJ_T0049136.1 MGP_129S1SvImJ_G0024202.1 mouse_genomes_project 18 22340924 22374149 - MGP_129S1SvImJ_P0049136 Slc39a6 protein_coding protein_coding MGP_129S1SvImJ_T0049137.1 MGP_129S1SvImJ_G0024202.1 mouse_genomes_project 18 22349395 22373847 - MGP_129S1SvImJ_P0049137 Slc39a6 protein_coding protein_coding MGP_129S1SvImJ_T0049138.1 MGP_129S1SvImJ_G0024202.1 mouse_genomes_project 18 22366648 22369752 - Slc39a6 protein_coding retained_intron MGP_129S1SvImJ_T0049139.1 MGP_129S1SvImJ_G0024202.1 mouse_genomes_project 18 22371816 22373625 - MGP_129S1SvImJ_P0049139 Slc39a6 protein_coding protein_coding MGP_129S1SvImJ_T0049594.1 MGP_129S1SvImJ_G0024389.1 mouse_genomes_project 18 42500955 42522241 - MGP_129S1SvImJ_P0049594 Gm94 protein_coding protein_coding MGP_129S1SvImJ_T0049634.1 MGP_129S1SvImJ_G0024409.1 mouse_genomes_project 18 45371438 45406863 - MGP_129S1SvImJ_P0049634 Tmed7 protein_coding protein_coding MGP_129S1SvImJ_T0049636.1 MGP_129S1SvImJ_G0024409.1 mouse_genomes_project 18 45395662 45407065 - Tmed7 protein_coding retained_intron MGP_129S1SvImJ_T0049637.1 MGP_129S1SvImJ_G0024409.1 mouse_genomes_project 18 45397755 45407084 - MGP_129S1SvImJ_P0049637 Tmed7 protein_coding protein_coding MGP_129S1SvImJ_T0003820.1 MGP_129S1SvImJ_G0003435.1 mouse_genomes_project 18 19294545 19298269 + 4930426D05Rik antisense antisense MGP_129S1SvImJ_T0003821.1 MGP_129S1SvImJ_G0003435.1 mouse_genomes_project 18 19294662 19298262 + 4930426D05Rik antisense antisense MGP_129S1SvImJ_T0003822.1 MGP_129S1SvImJ_G0003435.1 mouse_genomes_project 18 19295679 19298278 + 4930426D05Rik antisense antisense MGP_129S1SvImJ_T0003823.1 MGP_129S1SvImJ_G0003435.1 mouse_genomes_project 18 19295682 19299226 + 4930426D05Rik antisense antisense MGP_129S1SvImJ_T0049257.1 MGP_129S1SvImJ_G0024253.1 mouse_genomes_project 18 33098768 33103919 + MGP_129S1SvImJ_P0049257 Egr1 protein_coding protein_coding MGP_129S1SvImJ_T0049258.1 MGP_129S1SvImJ_G0024253.1 mouse_genomes_project 18 33100151 33103891 + MGP_129S1SvImJ_P0049258 Egr1 protein_coding protein_coding MGP_129S1SvImJ_T0049142.1 MGP_129S1SvImJ_G0024205.1 mouse_genomes_project 18 22486676 22486985 - MGP_129S1SvImJ_P0049142 Gm9955 protein_coding protein_coding MGP_129S1SvImJ_T0049081.1 MGP_129S1SvImJ_G0024181.1 mouse_genomes_project 18 18243980 18253057 + MGP_129S1SvImJ_P0049081 Ttr protein_coding protein_coding MGP_129S1SvImJ_T0048888.1 MGP_129S1SvImJ_G0024123.1 mouse_genomes_project 18 1220856 1243106 + MGP_129S1SvImJ_P0048888 Mtpap protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048889.1 MGP_129S1SvImJ_G0024123.1 mouse_genomes_project 18 1220863 1243969 + MGP_129S1SvImJ_P0048889 Mtpap protein_coding protein_coding MGP_129S1SvImJ_T0013333.1 MGP_129S1SvImJ_G0011422.1 mouse_genomes_project 18 14241058 14241699 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048944.1 MGP_129S1SvImJ_G0024132.1 mouse_genomes_project 18 3665193 3690189 + MGP_129S1SvImJ_P0048944 Rab18 protein_coding protein_coding MGP_129S1SvImJ_T0003812.1 MGP_129S1SvImJ_G0003428.1 mouse_genomes_project 18 3103090 3116461 + Gm17036 antisense antisense MGP_129S1SvImJ_T0049925.1 MGP_129S1SvImJ_G0024514.1 mouse_genomes_project 18 66146017 66160530 - MGP_129S1SvImJ_P0049925 Cplx4 protein_coding protein_coding MGP_129S1SvImJ_T0007025.1 MGP_129S1SvImJ_G0005779.1 mouse_genomes_project 18 31089418 31113623 - 2310026I22Rik lincRNA lincRNA MGP_129S1SvImJ_T0010272.1 MGP_129S1SvImJ_G0008388.1 mouse_genomes_project 18 59869049 59869159 + Gm23576 miRNA miRNA MGP_129S1SvImJ_T0049191.1 MGP_129S1SvImJ_G0024230.1 mouse_genomes_project 18 31003482 31034690 + MGP_129S1SvImJ_P0049191 Wdr36 protein_coding protein_coding MGP_129S1SvImJ_T0049192.1 MGP_129S1SvImJ_G0024230.1 mouse_genomes_project 18 31003482 31034760 + MGP_129S1SvImJ_P0049192 Wdr36 protein_coding protein_coding MGP_129S1SvImJ_T0050171.1 MGP_129S1SvImJ_G0024584.1 mouse_genomes_project 18 78955237 79020899 - MGP_129S1SvImJ_P0050171 Slc14a2 protein_coding protein_coding MGP_129S1SvImJ_T0050172.1 MGP_129S1SvImJ_G0024584.1 mouse_genomes_project 18 78993175 79018245 - MGP_129S1SvImJ_P0050172 Slc14a2 protein_coding protein_coding MGP_129S1SvImJ_T0049451.1 MGP_129S1SvImJ_G0024341.1 mouse_genomes_project 18 36118777 36259977 + MGP_129S1SvImJ_P0049451 Pcdhga7 protein_coding protein_coding MGP_129S1SvImJ_T0049452.1 MGP_129S1SvImJ_G0024341.1 mouse_genomes_project 18 36118831 36121875 + MGP_129S1SvImJ_P0049452 Pcdhga7 protein_coding protein_coding MGP_129S1SvImJ_T0050216.1 MGP_129S1SvImJ_G0024599.1 mouse_genomes_project 18 81902983 81924417 - MGP_129S1SvImJ_P0050216 Sall3 protein_coding protein_coding MGP_129S1SvImJ_T0049685.1 MGP_129S1SvImJ_G0024424.1 mouse_genomes_project 18 50190476 50398630 + MGP_129S1SvImJ_P0049685 Prr16 protein_coding protein_coding MGP_129S1SvImJ_T0049090.1 MGP_129S1SvImJ_G0024187.1 mouse_genomes_project 18 18698903 18726703 + MGP_129S1SvImJ_P0049090 Mep1b protein_coding protein_coding MGP_129S1SvImJ_T0100852.1 MGP_129S1SvImJ_G0038919.1 mouse_genomes_project 18 24384791 24384922 + Gm23674 snoRNA snoRNA MGP_129S1SvImJ_T0100855.1 MGP_129S1SvImJ_G0038922.1 mouse_genomes_project 18 29563762 29563895 - Gm25396 snoRNA snoRNA MGP_129S1SvImJ_T0049445.1 MGP_129S1SvImJ_G0024337.1 mouse_genomes_project 18 36087124 36259977 + MGP_129S1SvImJ_P0049445 Pcdhga4 protein_coding protein_coding MGP_129S1SvImJ_T0049446.1 MGP_129S1SvImJ_G0024337.1 mouse_genomes_project 18 36088798 36089694 + MGP_129S1SvImJ_P0049446 Pcdhga4 protein_coding protein_coding MGP_129S1SvImJ_T0003835.1 MGP_129S1SvImJ_G0003447.1 mouse_genomes_project 18 37511013 37511571 - Gm15334 antisense antisense MGP_129S1SvImJ_T0003834.1 MGP_129S1SvImJ_G0003446.1 mouse_genomes_project 18 36246130 36247323 - Gm29994 antisense antisense MGP_129S1SvImJ_T0050115.1 MGP_129S1SvImJ_G0024568.1 mouse_genomes_project 18 77576552 77623106 + MGP_129S1SvImJ_P0050115 Skor2 protein_coding protein_coding MGP_129S1SvImJ_T0013364.1 MGP_129S1SvImJ_G0011453.1 mouse_genomes_project 18 74923301 74923709 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007061.1 MGP_129S1SvImJ_G0005806.1 mouse_genomes_project 18 84197967 84199301 - 1700095A13Rik lincRNA lincRNA MGP_129S1SvImJ_T0010273.1 MGP_129S1SvImJ_G0008389.1 mouse_genomes_project 18 60647212 60647300 + Mir5107 miRNA miRNA MGP_129S1SvImJ_T0099610.1 MGP_129S1SvImJ_G0037677.1 mouse_genomes_project 18 61353229 61353330 - Gm25834 snRNA snRNA MGP_129S1SvImJ_T0049575.1 MGP_129S1SvImJ_G0024382.1 mouse_genomes_project 18 41219157 41220790 - MGP_129S1SvImJ_P0049575 Gpr151 protein_coding protein_coding MGP_129S1SvImJ_T0013324.1 MGP_129S1SvImJ_G0011413.1 mouse_genomes_project 18 4455979 4456387 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049442.1 MGP_129S1SvImJ_G0024334.1 mouse_genomes_project 18 36070871 36259974 + MGP_129S1SvImJ_P0049442 Pcdhga2 protein_coding protein_coding MGP_129S1SvImJ_T0100866.1 MGP_129S1SvImJ_G0038933.1 mouse_genomes_project 18 54340807 54340900 - Gm24183 snoRNA snoRNA MGP_129S1SvImJ_T0017678.1 MGP_129S1SvImJ_G0015368.1 mouse_genomes_project 18 66499693 66531495 + Gm15958 processed_transcript processed_transcript MGP_129S1SvImJ_T0017679.1 MGP_129S1SvImJ_G0015368.1 mouse_genomes_project 18 66500306 66524211 + Gm15958 processed_transcript processed_transcript MGP_129S1SvImJ_T0048883.1 MGP_129S1SvImJ_G0024122.1 mouse_genomes_project 18 1176658 1198244 - MGP_129S1SvImJ_P0048883 Map3k8 protein_coding protein_coding MGP_129S1SvImJ_T0048884.1 MGP_129S1SvImJ_G0024122.1 mouse_genomes_project 18 1176671 1198248 - MGP_129S1SvImJ_P0048884 Map3k8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048885.1 MGP_129S1SvImJ_G0024122.1 mouse_genomes_project 18 1176672 1181627 - Map3k8 protein_coding processed_transcript MGP_129S1SvImJ_T0048886.1 MGP_129S1SvImJ_G0024122.1 mouse_genomes_project 18 1179176 1180380 - Map3k8 protein_coding retained_intron MGP_129S1SvImJ_T0048887.1 MGP_129S1SvImJ_G0024122.1 mouse_genomes_project 18 1192786 1198306 - Map3k8 protein_coding retained_intron MGP_129S1SvImJ_T0049641.1 MGP_129S1SvImJ_G0024413.1 mouse_genomes_project 18 45564058 45617555 + MGP_129S1SvImJ_P0049641 Ap3s1 protein_coding protein_coding MGP_129S1SvImJ_T0049642.1 MGP_129S1SvImJ_G0024413.1 mouse_genomes_project 18 45564154 45616025 + MGP_129S1SvImJ_P0049642 Ap3s1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0100864.1 MGP_129S1SvImJ_G0038931.1 mouse_genomes_project 18 44722524 44722651 + Gm26262 snoRNA snoRNA MGP_129S1SvImJ_T0049895.1 MGP_129S1SvImJ_G0024509.1 mouse_genomes_project 18 65727726 65845208 + MGP_129S1SvImJ_P0049895 Zfp532 protein_coding protein_coding MGP_129S1SvImJ_T0049896.1 MGP_129S1SvImJ_G0024509.1 mouse_genomes_project 18 65727878 65772888 + MGP_129S1SvImJ_P0049896 Zfp532 protein_coding protein_coding MGP_129S1SvImJ_T0049897.1 MGP_129S1SvImJ_G0024509.1 mouse_genomes_project 18 65728583 65772877 + MGP_129S1SvImJ_P0049897 Zfp532 protein_coding protein_coding MGP_129S1SvImJ_T0049898.1 MGP_129S1SvImJ_G0024509.1 mouse_genomes_project 18 65728589 65772445 + MGP_129S1SvImJ_P0049898 Zfp532 protein_coding protein_coding MGP_129S1SvImJ_T0049899.1 MGP_129S1SvImJ_G0024509.1 mouse_genomes_project 18 65729239 65774703 + MGP_129S1SvImJ_P0049899 Zfp532 protein_coding protein_coding MGP_129S1SvImJ_T0049900.1 MGP_129S1SvImJ_G0024509.1 mouse_genomes_project 18 65729724 65773024 + MGP_129S1SvImJ_P0049900 Zfp532 protein_coding protein_coding MGP_129S1SvImJ_T0049901.1 MGP_129S1SvImJ_G0024509.1 mouse_genomes_project 18 65729779 65772452 + MGP_129S1SvImJ_P0049901 Zfp532 protein_coding protein_coding MGP_129S1SvImJ_T0049902.1 MGP_129S1SvImJ_G0024509.1 mouse_genomes_project 18 65729903 65844706 + MGP_129S1SvImJ_P0049902 Zfp532 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049903.1 MGP_129S1SvImJ_G0024509.1 mouse_genomes_project 18 65730011 65844705 + MGP_129S1SvImJ_P0049903 Zfp532 protein_coding protein_coding MGP_129S1SvImJ_T0049904.1 MGP_129S1SvImJ_G0024509.1 mouse_genomes_project 18 65730098 65772651 + MGP_129S1SvImJ_P0049904 Zfp532 protein_coding protein_coding MGP_129S1SvImJ_T0049905.1 MGP_129S1SvImJ_G0024509.1 mouse_genomes_project 18 65730423 65844699 + MGP_129S1SvImJ_P0049905 Zfp532 protein_coding protein_coding MGP_129S1SvImJ_T0049906.1 MGP_129S1SvImJ_G0024509.1 mouse_genomes_project 18 65730901 65772617 + MGP_129S1SvImJ_P0049906 Zfp532 protein_coding protein_coding MGP_129S1SvImJ_T0049907.1 MGP_129S1SvImJ_G0024509.1 mouse_genomes_project 18 65731423 65772562 + MGP_129S1SvImJ_P0049907 Zfp532 protein_coding protein_coding MGP_129S1SvImJ_T0049908.1 MGP_129S1SvImJ_G0024509.1 mouse_genomes_project 18 65767874 65774295 + Zfp532 protein_coding retained_intron MGP_129S1SvImJ_T0049909.1 MGP_129S1SvImJ_G0024509.1 mouse_genomes_project 18 65774608 65837582 + Zfp532 protein_coding retained_intron MGP_129S1SvImJ_T0049910.1 MGP_129S1SvImJ_G0024509.1 mouse_genomes_project 18 65798505 65841387 + Zfp532 protein_coding processed_transcript MGP_129S1SvImJ_T0003854.1 MGP_129S1SvImJ_G0003458.1 mouse_genomes_project 18 70421173 70423861 + 4930448D08Rik antisense antisense MGP_129S1SvImJ_T0010267.1 MGP_129S1SvImJ_G0008383.1 mouse_genomes_project 18 55291373 55291462 - Gm23335 miRNA miRNA MGP_129S1SvImJ_T0049893.1 MGP_129S1SvImJ_G0024508.1 mouse_genomes_project 18 65564671 65614340 + MGP_129S1SvImJ_P0049893 Malt1 protein_coding protein_coding MGP_129S1SvImJ_T0049894.1 MGP_129S1SvImJ_G0024508.1 mouse_genomes_project 18 65564880 65611941 + MGP_129S1SvImJ_P0049894 Malt1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0048874.1 MGP_129S1SvImJ_G0024119.1 mouse_genomes_project 18 171042 225030 + MGP_129S1SvImJ_P0048874 Cul2 protein_coding protein_coding MGP_129S1SvImJ_T0048875.1 MGP_129S1SvImJ_G0024119.1 mouse_genomes_project 18 171279 224041 + MGP_129S1SvImJ_P0048875 Cul2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0048876.1 MGP_129S1SvImJ_G0024119.1 mouse_genomes_project 18 171286 225033 + MGP_129S1SvImJ_P0048876 Cul2 protein_coding protein_coding MGP_129S1SvImJ_T0048877.1 MGP_129S1SvImJ_G0024119.1 mouse_genomes_project 18 171311 220187 + MGP_129S1SvImJ_P0048877 Cul2 protein_coding protein_coding MGP_129S1SvImJ_T0048878.1 MGP_129S1SvImJ_G0024119.1 mouse_genomes_project 18 213105 215904 + Cul2 protein_coding processed_transcript MGP_129S1SvImJ_T0048879.1 MGP_129S1SvImJ_G0024119.1 mouse_genomes_project 18 222539 223669 + Cul2 protein_coding processed_transcript MGP_129S1SvImJ_T0049886.1 MGP_129S1SvImJ_G0024505.1 mouse_genomes_project 18 64594323 64738465 - MGP_129S1SvImJ_P0049886 Atp8b1 protein_coding protein_coding MGP_129S1SvImJ_T0049887.1 MGP_129S1SvImJ_G0024505.1 mouse_genomes_project 18 64594330 64738361 - MGP_129S1SvImJ_P0049887 Atp8b1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0050159.1 MGP_129S1SvImJ_G0024578.1 mouse_genomes_project 18 78563280 78573149 - MGP_129S1SvImJ_P0050159 Haus1 protein_coding protein_coding MGP_129S1SvImJ_T0049938.1 MGP_129S1SvImJ_G0024519.1 mouse_genomes_project 18 67340515 67493245 + MGP_129S1SvImJ_P0049938 Gnal protein_coding protein_coding MGP_129S1SvImJ_T0049939.1 MGP_129S1SvImJ_G0024519.1 mouse_genomes_project 18 67396903 67493245 + MGP_129S1SvImJ_P0049939 Gnal protein_coding protein_coding MGP_129S1SvImJ_T0048918.1 MGP_129S1SvImJ_G0024128.1 mouse_genomes_project 18 2914297 3003244 - MGP_129S1SvImJ_P0048918 Arhgap12 protein_coding protein_coding MGP_129S1SvImJ_T0048919.1 MGP_129S1SvImJ_G0024128.1 mouse_genomes_project 18 2914655 3028556 - MGP_129S1SvImJ_P0048919 Arhgap12 protein_coding protein_coding MGP_129S1SvImJ_T0048920.1 MGP_129S1SvImJ_G0024128.1 mouse_genomes_project 18 2915065 3028609 - MGP_129S1SvImJ_P0048920 Arhgap12 protein_coding protein_coding MGP_129S1SvImJ_T0048921.1 MGP_129S1SvImJ_G0024128.1 mouse_genomes_project 18 2915085 3028747 - MGP_129S1SvImJ_P0048921 Arhgap12 protein_coding protein_coding MGP_129S1SvImJ_T0048922.1 MGP_129S1SvImJ_G0024128.1 mouse_genomes_project 18 2916300 3028541 - MGP_129S1SvImJ_P0048922 Arhgap12 protein_coding protein_coding MGP_129S1SvImJ_T0048923.1 MGP_129S1SvImJ_G0024128.1 mouse_genomes_project 18 2916424 3028537 - MGP_129S1SvImJ_P0048923 Arhgap12 protein_coding protein_coding MGP_129S1SvImJ_T0048924.1 MGP_129S1SvImJ_G0024128.1 mouse_genomes_project 18 2922816 2924438 - Arhgap12 protein_coding retained_intron MGP_129S1SvImJ_T0048925.1 MGP_129S1SvImJ_G0024128.1 mouse_genomes_project 18 2929147 2957448 - Arhgap12 protein_coding processed_transcript MGP_129S1SvImJ_T0048926.1 MGP_129S1SvImJ_G0024128.1 mouse_genomes_project 18 2936016 3002861 - MGP_129S1SvImJ_P0048926 Arhgap12 protein_coding protein_coding MGP_129S1SvImJ_T0048927.1 MGP_129S1SvImJ_G0024128.1 mouse_genomes_project 18 2944268 3028619 - Arhgap12 protein_coding processed_transcript MGP_129S1SvImJ_T0048928.1 MGP_129S1SvImJ_G0024128.1 mouse_genomes_project 18 2948568 2957297 - Arhgap12 protein_coding processed_transcript MGP_129S1SvImJ_T0048929.1 MGP_129S1SvImJ_G0024128.1 mouse_genomes_project 18 2948672 3028604 - MGP_129S1SvImJ_P0048929 Arhgap12 protein_coding protein_coding MGP_129S1SvImJ_T0048930.1 MGP_129S1SvImJ_G0024128.1 mouse_genomes_project 18 2951065 3028590 - Arhgap12 protein_coding processed_transcript MGP_129S1SvImJ_T0048931.1 MGP_129S1SvImJ_G0024128.1 mouse_genomes_project 18 2952435 3028584 - Arhgap12 protein_coding processed_transcript MGP_129S1SvImJ_T0048932.1 MGP_129S1SvImJ_G0024128.1 mouse_genomes_project 18 2956002 2958450 - Arhgap12 protein_coding retained_intron MGP_129S1SvImJ_T0049612.1 MGP_129S1SvImJ_G0024401.1 mouse_genomes_project 18 43166086 43575333 - MGP_129S1SvImJ_P0049612 Mcc protein_coding protein_coding MGP_129S1SvImJ_T0049613.1 MGP_129S1SvImJ_G0024401.1 mouse_genomes_project 18 43171573 43417056 - MGP_129S1SvImJ_P0049613 Mcc protein_coding protein_coding MGP_129S1SvImJ_T0049614.1 MGP_129S1SvImJ_G0024401.1 mouse_genomes_project 18 43261262 43263933 - Mcc protein_coding retained_intron MGP_129S1SvImJ_T0049615.1 MGP_129S1SvImJ_G0024401.1 mouse_genomes_project 18 43412422 43417074 - Mcc protein_coding retained_intron MGP_129S1SvImJ_T0049616.1 MGP_129S1SvImJ_G0024401.1 mouse_genomes_project 18 43470692 43483876 - Mcc protein_coding processed_transcript MGP_129S1SvImJ_T0011834.1 MGP_129S1SvImJ_G0009940.1 mouse_genomes_project 18 36169376 36259974 + MGP_129S1SvImJ_P0011834 Pcdhgb8 polymorphic_pseudogene polymorphic_pseudogene MGP_129S1SvImJ_T0049005.1 MGP_129S1SvImJ_G0024155.1 mouse_genomes_project 18 9121890 9271421 - MGP_129S1SvImJ_P0049005 Tmem241 protein_coding protein_coding MGP_129S1SvImJ_T0049006.1 MGP_129S1SvImJ_G0024155.1 mouse_genomes_project 18 9210756 9271457 - MGP_129S1SvImJ_P0049006 Tmem241 protein_coding protein_coding MGP_129S1SvImJ_T0098538.1 MGP_129S1SvImJ_G0036623.1 mouse_genomes_project 18 17339993 17340091 + Gm24238 rRNA rRNA MGP_129S1SvImJ_T0007024.1 MGP_129S1SvImJ_G0005778.1 mouse_genomes_project 18 30836570 31003545 - 4930455D15Rik lincRNA lincRNA MGP_129S1SvImJ_T0049838.1 MGP_129S1SvImJ_G0024484.1 mouse_genomes_project 18 61615763 61629655 - MGP_129S1SvImJ_P0049838 Grpel2 protein_coding protein_coding MGP_129S1SvImJ_T0049378.1 MGP_129S1SvImJ_G0024291.1 mouse_genomes_project 18 35179611 35197369 - MGP_129S1SvImJ_P0049378 Hars protein_coding protein_coding MGP_129S1SvImJ_T0050168.1 MGP_129S1SvImJ_G0024583.1 mouse_genomes_project 18 78905788 78929092 - MGP_129S1SvImJ_P0050168 Slc14a1 protein_coding protein_coding MGP_129S1SvImJ_T0050169.1 MGP_129S1SvImJ_G0024583.1 mouse_genomes_project 18 78907348 78948796 - MGP_129S1SvImJ_P0050169 Slc14a1 protein_coding protein_coding MGP_129S1SvImJ_T0050170.1 MGP_129S1SvImJ_G0024583.1 mouse_genomes_project 18 78907348 78928997 - MGP_129S1SvImJ_P0050170 Slc14a1 protein_coding protein_coding MGP_129S1SvImJ_T0049091.1 MGP_129S1SvImJ_G0024188.1 mouse_genomes_project 18 19189135 19295466 - MGP_129S1SvImJ_P0049091 Klhl14 protein_coding protein_coding MGP_129S1SvImJ_T0049092.1 MGP_129S1SvImJ_G0024188.1 mouse_genomes_project 18 19189137 19297839 - MGP_129S1SvImJ_P0049092 Klhl14 protein_coding protein_coding MGP_129S1SvImJ_T0049970.1 MGP_129S1SvImJ_G0024536.1 mouse_genomes_project 18 68756269 68773382 - MGP_129S1SvImJ_P0049970 Mc2r protein_coding protein_coding MGP_129S1SvImJ_T0049146.1 MGP_129S1SvImJ_G0024208.1 mouse_genomes_project 18 22977362 23288331 + MGP_129S1SvImJ_P0049146 AW554918 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049147.1 MGP_129S1SvImJ_G0024208.1 mouse_genomes_project 18 22977373 23291922 + MGP_129S1SvImJ_P0049147 AW554918 protein_coding protein_coding MGP_129S1SvImJ_T0049148.1 MGP_129S1SvImJ_G0024208.1 mouse_genomes_project 18 22977377 23000731 + AW554918 protein_coding processed_transcript MGP_129S1SvImJ_T0049149.1 MGP_129S1SvImJ_G0024208.1 mouse_genomes_project 18 22977383 23104105 + AW554918 protein_coding processed_transcript MGP_129S1SvImJ_T0049150.1 MGP_129S1SvImJ_G0024208.1 mouse_genomes_project 18 22977383 23291927 + MGP_129S1SvImJ_P0049150 AW554918 protein_coding protein_coding MGP_129S1SvImJ_T0049151.1 MGP_129S1SvImJ_G0024208.1 mouse_genomes_project 18 22977383 23291927 + MGP_129S1SvImJ_P0049151 AW554918 protein_coding protein_coding MGP_129S1SvImJ_T0049152.1 MGP_129S1SvImJ_G0024208.1 mouse_genomes_project 18 22977386 23288502 + MGP_129S1SvImJ_P0049152 AW554918 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049153.1 MGP_129S1SvImJ_G0024208.1 mouse_genomes_project 18 23052351 23288698 + MGP_129S1SvImJ_P0049153 AW554918 protein_coding protein_coding MGP_129S1SvImJ_T0049069.1 MGP_129S1SvImJ_G0024175.1 mouse_genomes_project 18 17454462 17495283 - MGP_129S1SvImJ_P0049069 Dsc3 protein_coding protein_coding MGP_129S1SvImJ_T0049070.1 MGP_129S1SvImJ_G0024175.1 mouse_genomes_project 18 17456948 17495111 - MGP_129S1SvImJ_P0049070 Dsc3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049599.1 MGP_129S1SvImJ_G0024392.1 mouse_genomes_project 18 42804381 42816997 + MGP_129S1SvImJ_P0049599 Spink6 protein_coding protein_coding MGP_129S1SvImJ_T0049742.1 MGP_129S1SvImJ_G0024450.1 mouse_genomes_project 18 56971578 57185125 + MGP_129S1SvImJ_P0049742 1700011I03Rik protein_coding protein_coding MGP_129S1SvImJ_T0049743.1 MGP_129S1SvImJ_G0024450.1 mouse_genomes_project 18 56971627 57185125 + MGP_129S1SvImJ_P0049743 1700011I03Rik protein_coding protein_coding MGP_129S1SvImJ_T0049744.1 MGP_129S1SvImJ_G0024450.1 mouse_genomes_project 18 56971680 57004912 + MGP_129S1SvImJ_P0049744 1700011I03Rik protein_coding protein_coding MGP_129S1SvImJ_T0049745.1 MGP_129S1SvImJ_G0024450.1 mouse_genomes_project 18 57001125 57185066 + MGP_129S1SvImJ_P0049745 1700011I03Rik protein_coding protein_coding MGP_129S1SvImJ_T0101661.1 MGP_129S1SvImJ_G0039687.1 mouse_genomes_project 18 75978209 75988386 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101662.1 MGP_129S1SvImJ_G0039687.1 mouse_genomes_project 18 75978480 75978738 - transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0101663.1 MGP_129S1SvImJ_G0039687.1 mouse_genomes_project 18 75985166 75988398 - transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0011471.1 MGP_129S1SvImJ_G0009587.1 mouse_genomes_project 18 22543747 22544024 + Gm24294 misc_RNA misc_RNA MGP_129S1SvImJ_T0099608.1 MGP_129S1SvImJ_G0037675.1 mouse_genomes_project 18 57118000 57118106 - Gm26038 snRNA snRNA MGP_129S1SvImJ_T0049723.1 MGP_129S1SvImJ_G0024442.1 mouse_genomes_project 18 55932308 55957841 + MGP_129S1SvImJ_P0049723 Phax protein_coding protein_coding MGP_129S1SvImJ_T0049724.1 MGP_129S1SvImJ_G0024442.1 mouse_genomes_project 18 55932458 55950956 + MGP_129S1SvImJ_P0049724 Phax protein_coding protein_coding MGP_129S1SvImJ_T0049725.1 MGP_129S1SvImJ_G0024442.1 mouse_genomes_project 18 55943520 55958364 + MGP_129S1SvImJ_P0049725 Phax protein_coding protein_coding MGP_129S1SvImJ_T0013325.1 MGP_129S1SvImJ_G0011414.1 mouse_genomes_project 18 4824356 4825089 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0048952.1 MGP_129S1SvImJ_G0024136.1 mouse_genomes_project 18 4757219 4814838 + MGP_129S1SvImJ_P0048952 Wac protein_coding protein_coding MGP_129S1SvImJ_T0048953.1 MGP_129S1SvImJ_G0024136.1 mouse_genomes_project 18 4757232 4760921 + MGP_129S1SvImJ_P0048953 Wac protein_coding protein_coding MGP_129S1SvImJ_T0048954.1 MGP_129S1SvImJ_G0024136.1 mouse_genomes_project 18 4757453 4814756 + MGP_129S1SvImJ_P0048954 Wac protein_coding protein_coding MGP_129S1SvImJ_T0048955.1 MGP_129S1SvImJ_G0024136.1 mouse_genomes_project 18 4757584 4820603 + MGP_129S1SvImJ_P0048955 Wac protein_coding protein_coding MGP_129S1SvImJ_T0048956.1 MGP_129S1SvImJ_G0024136.1 mouse_genomes_project 18 4758319 4814756 + MGP_129S1SvImJ_P0048956 Wac protein_coding protein_coding MGP_129S1SvImJ_T0048957.1 MGP_129S1SvImJ_G0024136.1 mouse_genomes_project 18 4758948 4805341 + MGP_129S1SvImJ_P0048957 Wac protein_coding protein_coding MGP_129S1SvImJ_T0048958.1 MGP_129S1SvImJ_G0024136.1 mouse_genomes_project 18 4758969 4794670 + MGP_129S1SvImJ_P0048958 Wac protein_coding protein_coding MGP_129S1SvImJ_T0048959.1 MGP_129S1SvImJ_G0024136.1 mouse_genomes_project 18 4760944 4814263 + MGP_129S1SvImJ_P0048959 Wac protein_coding protein_coding MGP_129S1SvImJ_T0048960.1 MGP_129S1SvImJ_G0024136.1 mouse_genomes_project 18 4794652 4805348 + MGP_129S1SvImJ_P0048960 Wac protein_coding protein_coding MGP_129S1SvImJ_T0048961.1 MGP_129S1SvImJ_G0024136.1 mouse_genomes_project 18 4799657 4805444 + Wac protein_coding retained_intron MGP_129S1SvImJ_T0048962.1 MGP_129S1SvImJ_G0024136.1 mouse_genomes_project 18 4799675 4811276 + MGP_129S1SvImJ_P0048962 Wac protein_coding protein_coding MGP_129S1SvImJ_T0048963.1 MGP_129S1SvImJ_G0024136.1 mouse_genomes_project 18 4810411 4873489 + MGP_129S1SvImJ_P0048963 Wac protein_coding protein_coding MGP_129S1SvImJ_T0050238.1 MGP_129S1SvImJ_G0024604.1 mouse_genomes_project 18 85146074 85223953 - MGP_129S1SvImJ_P0050238 Tshz1 protein_coding protein_coding MGP_129S1SvImJ_T0050239.1 MGP_129S1SvImJ_G0024604.1 mouse_genomes_project 18 85146530 85223939 - Tshz1 protein_coding processed_transcript MGP_129S1SvImJ_T0049576.1 MGP_129S1SvImJ_G0024383.1 mouse_genomes_project 18 41281688 41560110 - Ppp2r2b protein_coding processed_transcript MGP_129S1SvImJ_T0049577.1 MGP_129S1SvImJ_G0024383.1 mouse_genomes_project 18 41290447 41559901 - MGP_129S1SvImJ_P0049577 Ppp2r2b protein_coding protein_coding MGP_129S1SvImJ_T0049578.1 MGP_129S1SvImJ_G0024383.1 mouse_genomes_project 18 41290447 41718820 - MGP_129S1SvImJ_P0049578 Ppp2r2b protein_coding protein_coding MGP_129S1SvImJ_T0049579.1 MGP_129S1SvImJ_G0024383.1 mouse_genomes_project 18 41290472 41560250 - MGP_129S1SvImJ_P0049579 Ppp2r2b protein_coding protein_coding MGP_129S1SvImJ_T0049580.1 MGP_129S1SvImJ_G0024383.1 mouse_genomes_project 18 41390262 41599829 - Ppp2r2b protein_coding processed_transcript MGP_129S1SvImJ_T0049581.1 MGP_129S1SvImJ_G0024383.1 mouse_genomes_project 18 41410785 41559422 - Ppp2r2b protein_coding processed_transcript MGP_129S1SvImJ_T0049017.1 MGP_129S1SvImJ_G0024158.1 mouse_genomes_project 18 9344077 9401128 - MGP_129S1SvImJ_P0049017 Npc1 protein_coding protein_coding MGP_129S1SvImJ_T0049018.1 MGP_129S1SvImJ_G0024158.1 mouse_genomes_project 18 9373548 9375727 - Npc1 protein_coding processed_transcript MGP_129S1SvImJ_T0049019.1 MGP_129S1SvImJ_G0024158.1 mouse_genomes_project 18 9380830 9401086 - Npc1 protein_coding retained_intron MGP_129S1SvImJ_T0049020.1 MGP_129S1SvImJ_G0024158.1 mouse_genomes_project 18 9381302 9401054 - Npc1 protein_coding retained_intron MGP_129S1SvImJ_T0049021.1 MGP_129S1SvImJ_G0024158.1 mouse_genomes_project 18 9385585 9387846 - Npc1 protein_coding processed_transcript MGP_129S1SvImJ_T0048996.1 MGP_129S1SvImJ_G0024151.1 mouse_genomes_project 18 7665805 7766166 + MGP_129S1SvImJ_P0048996 Mib1 protein_coding protein_coding MGP_129S1SvImJ_T0048997.1 MGP_129S1SvImJ_G0024151.1 mouse_genomes_project 18 7665912 7759803 + MGP_129S1SvImJ_P0048997 Mib1 protein_coding protein_coding MGP_129S1SvImJ_T0048998.1 MGP_129S1SvImJ_G0024151.1 mouse_genomes_project 18 7666001 7697756 + Mib1 protein_coding retained_intron MGP_129S1SvImJ_T0048999.1 MGP_129S1SvImJ_G0024151.1 mouse_genomes_project 18 7702839 7766292 + MGP_129S1SvImJ_P0048999 Mib1 protein_coding protein_coding MGP_129S1SvImJ_T0049000.1 MGP_129S1SvImJ_G0024151.1 mouse_genomes_project 18 7741032 7765216 + MGP_129S1SvImJ_P0049000 Mib1 protein_coding protein_coding MGP_129S1SvImJ_T0048994.1 MGP_129S1SvImJ_G0024150.1 mouse_genomes_project 18 7588628 7606846 - MGP_129S1SvImJ_P0048994 Abhd3 protein_coding protein_coding MGP_129S1SvImJ_T0048995.1 MGP_129S1SvImJ_G0024150.1 mouse_genomes_project 18 7589272 7646336 - MGP_129S1SvImJ_P0048995 Abhd3 protein_coding protein_coding MGP_129S1SvImJ_T0101659.1 MGP_129S1SvImJ_G0039686.1 mouse_genomes_project 18 49156921 49158405 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101660.1 MGP_129S1SvImJ_G0039686.1 mouse_genomes_project 18 49156990 49158313 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0050250.1 MGP_129S1SvImJ_G0024608.1 mouse_genomes_project 18 85827625 85846705 - MGP_129S1SvImJ_P0050250 Cndp2 protein_coding protein_coding MGP_129S1SvImJ_T0050251.1 MGP_129S1SvImJ_G0024608.1 mouse_genomes_project 18 85827625 85841298 - MGP_129S1SvImJ_P0050251 Cndp2 protein_coding protein_coding MGP_129S1SvImJ_T0049606.1 MGP_129S1SvImJ_G0024397.1 mouse_genomes_project 18 42942837 42947573 + MGP_129S1SvImJ_P0049606 Gm10542 protein_coding protein_coding MGP_129S1SvImJ_T0098546.1 MGP_129S1SvImJ_G0036631.1 mouse_genomes_project 18 69974799 69974907 + Gm24845 rRNA rRNA MGP_129S1SvImJ_T0049848.1 MGP_129S1SvImJ_G0024491.1 mouse_genomes_project 18 62448121 62492735 - MGP_129S1SvImJ_P0049848 Fbxo38 protein_coding protein_coding MGP_129S1SvImJ_T0102370.1 MGP_129S1SvImJ_G0040204.1 mouse_genomes_project 18 35419940 35420727 + unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0011482.1 MGP_129S1SvImJ_G0009598.1 mouse_genomes_project 18 55312932 55313238 - Gm22484 misc_RNA misc_RNA MGP_129S1SvImJ_T0048939.1 MGP_129S1SvImJ_G0024130.1 mouse_genomes_project 18 3303415 3387429 - MGP_129S1SvImJ_P0048939 Epc1 protein_coding protein_coding MGP_129S1SvImJ_T0048940.1 MGP_129S1SvImJ_G0024130.1 mouse_genomes_project 18 3303417 3362105 - MGP_129S1SvImJ_P0048940 Epc1 protein_coding protein_coding MGP_129S1SvImJ_T0048941.1 MGP_129S1SvImJ_G0024130.1 mouse_genomes_project 18 3307006 3309309 - MGP_129S1SvImJ_P0048941 Epc1 protein_coding protein_coding MGP_129S1SvImJ_T0048942.1 MGP_129S1SvImJ_G0024130.1 mouse_genomes_project 18 3360408 3362105 - MGP_129S1SvImJ_P0048942 Epc1 protein_coding protein_coding MGP_129S1SvImJ_T0013370.1 MGP_129S1SvImJ_G0011459.1 mouse_genomes_project 18 91308883 91309841 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007056.1 MGP_129S1SvImJ_G0005802.1 mouse_genomes_project 18 78531504 78535294 - A330094K24Rik lincRNA lincRNA MGP_129S1SvImJ_T0049798.1 MGP_129S1SvImJ_G0024470.1 mouse_genomes_project 18 60759328 60766114 + MGP_129S1SvImJ_P0049798 Arsi protein_coding protein_coding MGP_129S1SvImJ_T0049746.1 MGP_129S1SvImJ_G0024451.1 mouse_genomes_project 18 57342953 57425806 + MGP_129S1SvImJ_P0049746 Slc12a2 protein_coding protein_coding MGP_129S1SvImJ_T0049443.1 MGP_129S1SvImJ_G0024335.1 mouse_genomes_project 18 36076225 36259977 + MGP_129S1SvImJ_P0049443 Pcdhga3 protein_coding protein_coding MGP_129S1SvImJ_T0010276.1 MGP_129S1SvImJ_G0008392.1 mouse_genomes_project 18 60974629 60974693 + Mir6983 miRNA miRNA MGP_129S1SvImJ_T0099614.1 MGP_129S1SvImJ_G0037681.1 mouse_genomes_project 18 64808612 64808674 + Gm23016 snRNA snRNA MGP_129S1SvImJ_T0100847.1 MGP_129S1SvImJ_G0038914.1 mouse_genomes_project 18 7492273 7492391 - Gm24894 snoRNA snoRNA MGP_129S1SvImJ_T0007011.1 MGP_129S1SvImJ_G0005769.1 mouse_genomes_project 18 8007592 8009999 - 1010001N08Rik lincRNA lincRNA MGP_129S1SvImJ_T0007012.1 MGP_129S1SvImJ_G0005769.1 mouse_genomes_project 18 8008436 8011076 - 1010001N08Rik lincRNA lincRNA MGP_129S1SvImJ_T0098541.1 MGP_129S1SvImJ_G0036626.1 mouse_genomes_project 18 32871809 32871928 + n-R5s25 rRNA rRNA MGP_129S1SvImJ_T0100850.1 MGP_129S1SvImJ_G0038917.1 mouse_genomes_project 18 14417851 14417981 + Gm22470 snoRNA snoRNA MGP_129S1SvImJ_T0049749.1 MGP_129S1SvImJ_G0024453.1 mouse_genomes_project 18 58077322 58146415 + MGP_129S1SvImJ_P0049749 Slc27a6 protein_coding protein_coding MGP_129S1SvImJ_T0049610.1 MGP_129S1SvImJ_G0024400.1 mouse_genomes_project 18 43118833 43134418 + MGP_129S1SvImJ_P0049610 Dcp2 protein_coding protein_coding MGP_129S1SvImJ_T0049611.1 MGP_129S1SvImJ_G0024400.1 mouse_genomes_project 18 43118858 43165996 + MGP_129S1SvImJ_P0049611 Dcp2 protein_coding protein_coding MGP_129S1SvImJ_T0049029.1 MGP_129S1SvImJ_G0024161.1 mouse_genomes_project 18 9847568 9896509 + Ttc39c protein_coding retained_intron MGP_129S1SvImJ_T0049030.1 MGP_129S1SvImJ_G0024161.1 mouse_genomes_project 18 9848110 9944889 + MGP_129S1SvImJ_P0049030 Ttc39c protein_coding protein_coding MGP_129S1SvImJ_T0049031.1 MGP_129S1SvImJ_G0024161.1 mouse_genomes_project 18 9940228 9942341 + Ttc39c protein_coding retained_intron MGP_129S1SvImJ_T0099606.1 MGP_129S1SvImJ_G0037673.1 mouse_genomes_project 18 51287726 51287833 - Gm22259 snRNA snRNA MGP_129S1SvImJ_T0049522.1 MGP_129S1SvImJ_G0024364.1 mouse_genomes_project 18 36883821 36930476 + MGP_129S1SvImJ_P0049522 Ndfip1 protein_coding protein_coding MGP_129S1SvImJ_T0050116.1 MGP_129S1SvImJ_G0024569.1 mouse_genomes_project 18 77656160 77670014 + MGP_129S1SvImJ_P0050116 Ier3ip1 protein_coding protein_coding MGP_129S1SvImJ_T0050117.1 MGP_129S1SvImJ_G0024569.1 mouse_genomes_project 18 77656188 77670014 + Ier3ip1 protein_coding processed_transcript MGP_129S1SvImJ_T0050118.1 MGP_129S1SvImJ_G0024569.1 mouse_genomes_project 18 77656206 77668166 + Ier3ip1 protein_coding retained_intron MGP_129S1SvImJ_T0050120.1 MGP_129S1SvImJ_G0024569.1 mouse_genomes_project 18 77667702 77669100 + Ier3ip1 protein_coding retained_intron MGP_129S1SvImJ_T0050144.1 MGP_129S1SvImJ_G0024574.1 mouse_genomes_project 18 77922096 78002268 + MGP_129S1SvImJ_P0050144 St8sia5 protein_coding protein_coding MGP_129S1SvImJ_T0050145.1 MGP_129S1SvImJ_G0024574.1 mouse_genomes_project 18 77922222 78002138 + MGP_129S1SvImJ_P0050145 St8sia5 protein_coding protein_coding MGP_129S1SvImJ_T0013323.1 MGP_129S1SvImJ_G0011412.1 mouse_genomes_project 18 3251154 3251463 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0049265.1 MGP_129S1SvImJ_G0024256.1 mouse_genomes_project 18 33391780 33538181 + MGP_129S1SvImJ_P0049265 Ctnna1 protein_coding protein_coding MGP_129S1SvImJ_T0049143.1 MGP_129S1SvImJ_G0024206.1 mouse_genomes_project 18 22487081 22938832 + MGP_129S1SvImJ_P0049143 Fhod3 protein_coding protein_coding MGP_129S1SvImJ_T0050075.1 MGP_129S1SvImJ_G0024553.1 mouse_genomes_project 18 74668893 74669376 + MGP_129S1SvImJ_P0050075 Gm9925 protein_coding protein_coding MGP_129S1SvImJ_T0010283.1 MGP_129S1SvImJ_G0008399.1 mouse_genomes_project 18 68606820 68606874 - Mir7219 miRNA miRNA MGP_129S1SvImJ_T0049645.1 MGP_129S1SvImJ_G0024415.1 mouse_genomes_project 18 45762347 45772249 + MGP_129S1SvImJ_P0049645 Arl14epl protein_coding protein_coding MGP_129S1SvImJ_T0049523.1 MGP_129S1SvImJ_G0024365.1 mouse_genomes_project 18 37061711 37076702 - MGP_129S1SvImJ_P0049523 Spry4 protein_coding protein_coding MGP_129S1SvImJ_T0049302.1 MGP_129S1SvImJ_G0024265.1 mouse_genomes_project 18 33970720 33975608 - MGP_129S1SvImJ_P0049302 Prob1 protein_coding protein_coding MGP_129S1SvImJ_T0049303.1 MGP_129S1SvImJ_G0024265.1 mouse_genomes_project 18 33970724 33972376 - Prob1 protein_coding processed_transcript MGP_129S1SvImJ_T0049304.1 MGP_129S1SvImJ_G0024265.1 mouse_genomes_project 18 33972536 33975557 - MGP_129S1SvImJ_P0049304 Prob1 protein_coding protein_coding MGP_129S1SvImJ_T0010251.1 MGP_129S1SvImJ_G0008367.1 mouse_genomes_project 18 7725478 7725546 - Mir133a-1 miRNA miRNA MGP_129S1SvImJ_T0049969.1 MGP_129S1SvImJ_G0024535.1 mouse_genomes_project 18 68686351 68688460 + MGP_129S1SvImJ_P0049969 Mc5r protein_coding protein_coding MGP_129S1SvImJ_T0049375.1 MGP_129S1SvImJ_G0024290.1 mouse_genomes_project 18 35176725 35179296 - Dnd1 protein_coding retained_intron MGP_129S1SvImJ_T0049376.1 MGP_129S1SvImJ_G0024290.1 mouse_genomes_project 18 35176727 35179280 - MGP_129S1SvImJ_P0049376 Dnd1 protein_coding protein_coding MGP_129S1SvImJ_T0049377.1 MGP_129S1SvImJ_G0024290.1 mouse_genomes_project 18 35176729 35179280 - Dnd1 protein_coding retained_intron MGP_129S1SvImJ_T0099619.1 MGP_129S1SvImJ_G0037686.1 mouse_genomes_project 18 79475519 79475679 + Gm23895 snRNA snRNA MGP_129S1SvImJ_T0049735.1 MGP_129S1SvImJ_G0024446.1 mouse_genomes_project 18 56360953 56381467 - MGP_129S1SvImJ_P0049735 C330018D20Rik protein_coding protein_coding MGP_129S1SvImJ_T0049736.1 MGP_129S1SvImJ_G0024446.1 mouse_genomes_project 18 56362734 56381453 - MGP_129S1SvImJ_P0049736 C330018D20Rik protein_coding protein_coding MGP_129S1SvImJ_T0049737.1 MGP_129S1SvImJ_G0024446.1 mouse_genomes_project 18 56374618 56381345 - C330018D20Rik protein_coding processed_transcript MGP_129S1SvImJ_T0049424.1 MGP_129S1SvImJ_G0024318.1 mouse_genomes_project 18 35791490 35795938 + MGP_129S1SvImJ_P0049424 Pcdhb9 protein_coding protein_coding MGP_129S1SvImJ_T0001032.1 MGP_129S1SvImJ_G0000961.1 mouse_genomes_project 18 54606516 54606948 + TEC TEC MGP_129S1SvImJ_T0099616.1 MGP_129S1SvImJ_G0037683.1 mouse_genomes_project 18 66071909 66071969 - Gm25150 snRNA snRNA MGP_129S1SvImJ_T0049885.1 MGP_129S1SvImJ_G0024504.1 mouse_genomes_project 18 64555937 64573801 - MGP_129S1SvImJ_P0049885 Nars protein_coding protein_coding MGP_129S1SvImJ_T0099600.1 MGP_129S1SvImJ_G0037667.1 mouse_genomes_project 18 41729647 41729754 - Gm22264 snRNA snRNA MGP_129S1SvImJ_T0013356.1 MGP_129S1SvImJ_G0011445.1 mouse_genomes_project 18 49246004 49246749 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003817.1 MGP_129S1SvImJ_G0003432.1 mouse_genomes_project 18 9670332 9673565 - Gm29200 antisense antisense MGP_129S1SvImJ_T0010248.1 MGP_129S1SvImJ_G0008364.1 mouse_genomes_project 18 3361812 3361895 - Mir1893 miRNA miRNA MGP_129S1SvImJ_T0049761.1 MGP_129S1SvImJ_G0024459.1 mouse_genomes_project 18 60043287 60052340 + MGP_129S1SvImJ_P0049761 F830016B08Rik protein_coding protein_coding MGP_129S1SvImJ_T0048965.1 MGP_129S1SvImJ_G0024138.1 mouse_genomes_project 18 6174384 6177730 + MGP_129S1SvImJ_P0048965 Fzd8 protein_coding protein_coding MGP_129S1SvImJ_T0049356.1 MGP_129S1SvImJ_G0024282.1 mouse_genomes_project 18 35075012 35079504 - MGP_129S1SvImJ_P0049356 Sra1 protein_coding protein_coding MGP_129S1SvImJ_T0049357.1 MGP_129S1SvImJ_G0024282.1 mouse_genomes_project 18 35075577 35078588 - MGP_129S1SvImJ_P0049357 Sra1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049358.1 MGP_129S1SvImJ_G0024282.1 mouse_genomes_project 18 35075603 35078608 - Sra1 protein_coding retained_intron MGP_129S1SvImJ_T0049359.1 MGP_129S1SvImJ_G0024282.1 mouse_genomes_project 18 35075760 35078587 - MGP_129S1SvImJ_P0049359 Sra1 protein_coding protein_coding MGP_129S1SvImJ_T0049360.1 MGP_129S1SvImJ_G0024282.1 mouse_genomes_project 18 35078123 35078578 - Sra1 protein_coding retained_intron MGP_129S1SvImJ_T0049361.1 MGP_129S1SvImJ_G0024282.1 mouse_genomes_project 18 35079467 35086268 - MGP_129S1SvImJ_P0049361 Sra1 protein_coding protein_coding MGP_129S1SvImJ_T0049427.1 MGP_129S1SvImJ_G0024321.1 mouse_genomes_project 18 35835295 35839005 + MGP_129S1SvImJ_P0049427 Pcdhb13 protein_coding protein_coding MGP_129S1SvImJ_T0098739.1 MGP_129S1SvImJ_G0036824.1 mouse_genomes_project 18 75425573 75425713 - Gm23119 scaRNA scaRNA MGP_129S1SvImJ_T0100860.1 MGP_129S1SvImJ_G0038927.1 mouse_genomes_project 18 33193424 33193494 - Gm26109 snoRNA snoRNA MGP_129S1SvImJ_T0003828.1 MGP_129S1SvImJ_G0003440.1 mouse_genomes_project 18 35414960 35426766 - Gm10545 antisense antisense MGP_129S1SvImJ_T0049691.1 MGP_129S1SvImJ_G0024429.1 mouse_genomes_project 18 51739403 51763274 + MGP_129S1SvImJ_P0049691 Zfp474 protein_coding protein_coding MGP_129S1SvImJ_T0049464.1 MGP_129S1SvImJ_G0024350.1 mouse_genomes_project 18 36173155 36259977 + MGP_129S1SvImJ_P0049464 Pcdhga12 protein_coding protein_coding MGP_129S1SvImJ_T0049465.1 MGP_129S1SvImJ_G0024350.1 mouse_genomes_project 18 36173349 36179699 + Pcdhga12 protein_coding retained_intron MGP_129S1SvImJ_T0007023.1 MGP_129S1SvImJ_G0005777.1 mouse_genomes_project 18 30499199 30521381 - A830052D11Rik lincRNA lincRNA MGP_129S1SvImJ_T0048950.1 MGP_129S1SvImJ_G0024134.1 mouse_genomes_project 18 3976883 4170724 - MGP_129S1SvImJ_P0048950 Armc4 protein_coding protein_coding MGP_129S1SvImJ_T0048881.1 MGP_129S1SvImJ_G0024121.1 mouse_genomes_project 18 991076 1008080 + MGP_129S1SvImJ_P0048881 Lyzl1 protein_coding protein_coding MGP_129S1SvImJ_T0048882.1 MGP_129S1SvImJ_G0024121.1 mouse_genomes_project 18 991106 1008080 + MGP_129S1SvImJ_P0048882 Lyzl1 protein_coding protein_coding MGP_129S1SvImJ_T0049559.1 MGP_129S1SvImJ_G0024371.1 mouse_genomes_project 18 38822595 38823319 + MGP_129S1SvImJ_P0049559 2900055J20Rik protein_coding protein_coding MGP_129S1SvImJ_T0010279.1 MGP_129S1SvImJ_G0008395.1 mouse_genomes_project 18 61547378 61547448 - Mir145a miRNA miRNA MGP_129S1SvImJ_T0050236.1 MGP_129S1SvImJ_G0024603.1 mouse_genomes_project 18 83969466 84077398 + MGP_129S1SvImJ_P0050236 Zfp516 protein_coding protein_coding MGP_129S1SvImJ_T0050237.1 MGP_129S1SvImJ_G0024603.1 mouse_genomes_project 18 84021218 84077398 + MGP_129S1SvImJ_P0050237 Zfp516 protein_coding protein_coding MGP_129S1SvImJ_T0007040.1 MGP_129S1SvImJ_G0005790.1 mouse_genomes_project 18 54230071 54237240 + Gm26742 lincRNA lincRNA MGP_129S1SvImJ_T0049705.1 MGP_129S1SvImJ_G0024435.1 mouse_genomes_project 18 52584737 52597459 - MGP_129S1SvImJ_P0049705 Ppic protein_coding protein_coding MGP_129S1SvImJ_T0050173.1 MGP_129S1SvImJ_G0024585.1 mouse_genomes_project 18 79169086 79170038 + MGP_129S1SvImJ_P0050173 Gm6133 protein_coding protein_coding MGP_129S1SvImJ_T0100858.1 MGP_129S1SvImJ_G0038925.1 mouse_genomes_project 18 32285920 32286046 + Gm24432 snoRNA snoRNA MGP_129S1SvImJ_T0050151.1 MGP_129S1SvImJ_G0024576.1 mouse_genomes_project 18 78224912 78349246 - MGP_129S1SvImJ_P0050151 Rnf165 protein_coding protein_coding MGP_129S1SvImJ_T0050152.1 MGP_129S1SvImJ_G0024576.1 mouse_genomes_project 18 78233439 78265408 - MGP_129S1SvImJ_P0050152 Rnf165 protein_coding protein_coding MGP_129S1SvImJ_T0050153.1 MGP_129S1SvImJ_G0024576.1 mouse_genomes_project 18 78233998 78239701 - Rnf165 protein_coding retained_intron MGP_129S1SvImJ_T0050154.1 MGP_129S1SvImJ_G0024576.1 mouse_genomes_project 18 78239289 78349160 - MGP_129S1SvImJ_P0050154 Rnf165 protein_coding protein_coding MGP_129S1SvImJ_T0050155.1 MGP_129S1SvImJ_G0024576.1 mouse_genomes_project 18 78240867 78284073 - Rnf165 protein_coding processed_transcript MGP_129S1SvImJ_T0050156.1 MGP_129S1SvImJ_G0024576.1 mouse_genomes_project 18 78345233 78347749 - Rnf165 protein_coding retained_intron MGP_129S1SvImJ_T0050157.1 MGP_129S1SvImJ_G0024576.1 mouse_genomes_project 18 78346270 78349215 - MGP_129S1SvImJ_P0050157 Rnf165 protein_coding protein_coding MGP_129S1SvImJ_T0049513.1 MGP_129S1SvImJ_G0024360.1 mouse_genomes_project 18 36689658 36701925 + MGP_129S1SvImJ_P0049513 0610009O20Rik protein_coding protein_coding MGP_129S1SvImJ_T0050140.1 MGP_129S1SvImJ_G0024572.1 mouse_genomes_project 18 77799324 77892094 + MGP_129S1SvImJ_P0050140 Pias2 protein_coding protein_coding MGP_129S1SvImJ_T0050141.1 MGP_129S1SvImJ_G0024572.1 mouse_genomes_project 18 77801237 77892094 + MGP_129S1SvImJ_P0050141 Pias2 protein_coding protein_coding MGP_129S1SvImJ_T0050142.1 MGP_129S1SvImJ_G0024572.1 mouse_genomes_project 18 77801237 77883325 + MGP_129S1SvImJ_P0050142 Pias2 protein_coding protein_coding MGP_129S1SvImJ_T0050076.1 MGP_129S1SvImJ_G0024554.1 mouse_genomes_project 18 74817098 74829633 - MGP_129S1SvImJ_P0050076 Ska1 protein_coding protein_coding MGP_129S1SvImJ_T0050077.1 MGP_129S1SvImJ_G0024554.1 mouse_genomes_project 18 74817098 74829633 - MGP_129S1SvImJ_P0050077 Ska1 protein_coding protein_coding MGP_129S1SvImJ_T0050084.1 MGP_129S1SvImJ_G0024558.1 mouse_genomes_project 18 75079076 75268845 + MGP_129S1SvImJ_P0050084 Myo5b protein_coding protein_coding MGP_129S1SvImJ_T0050085.1 MGP_129S1SvImJ_G0024558.1 mouse_genomes_project 18 75079104 75153073 + Myo5b protein_coding processed_transcript MGP_129S1SvImJ_T0050086.1 MGP_129S1SvImJ_G0024558.1 mouse_genomes_project 18 75080683 75418539 + MGP_129S1SvImJ_P0050086 Myo5b protein_coding protein_coding MGP_129S1SvImJ_T0050087.1 MGP_129S1SvImJ_G0024558.1 mouse_genomes_project 18 75080751 75319009 + Myo5b protein_coding processed_transcript MGP_129S1SvImJ_T0050088.1 MGP_129S1SvImJ_G0024558.1 mouse_genomes_project 18 75080753 75417851 + MGP_129S1SvImJ_P0050088 Myo5b protein_coding protein_coding MGP_129S1SvImJ_T0050089.1 MGP_129S1SvImJ_G0024558.1 mouse_genomes_project 18 75289146 75303889 + Myo5b protein_coding processed_transcript MGP_129S1SvImJ_T0050090.1 MGP_129S1SvImJ_G0024558.1 mouse_genomes_project 18 75367048 75376688 + Myo5b protein_coding processed_transcript MGP_129S1SvImJ_T0050091.1 MGP_129S1SvImJ_G0024558.1 mouse_genomes_project 18 75373168 75376681 + MGP_129S1SvImJ_P0050091 Myo5b protein_coding protein_coding MGP_129S1SvImJ_T0050092.1 MGP_129S1SvImJ_G0024558.1 mouse_genomes_project 18 75374426 75376679 + Myo5b protein_coding retained_intron MGP_129S1SvImJ_T0050093.1 MGP_129S1SvImJ_G0024558.1 mouse_genomes_project 18 75375215 75382078 + Myo5b protein_coding processed_transcript MGP_129S1SvImJ_T0050094.1 MGP_129S1SvImJ_G0024558.1 mouse_genomes_project 18 75393294 75418523 + Myo5b protein_coding retained_intron MGP_129S1SvImJ_T0010291.1 MGP_129S1SvImJ_G0008407.1 mouse_genomes_project 18 83764896 83764956 + Mir5112 miRNA miRNA MGP_129S1SvImJ_T0049936.1 MGP_129S1SvImJ_G0024517.1 mouse_genomes_project 18 66689357 66696304 + MGP_129S1SvImJ_P0049936 Pmaip1 protein_coding protein_coding MGP_129S1SvImJ_T0050217.1 MGP_129S1SvImJ_G0024600.1 mouse_genomes_project 18 83413559 83427845 - MGP_129S1SvImJ_P0050217 Galr1 protein_coding protein_coding MGP_129S1SvImJ_T0050247.1 MGP_129S1SvImJ_G0024607.1 mouse_genomes_project 18 85773000 85812355 - MGP_129S1SvImJ_P0050247 Cndp1 protein_coding protein_coding MGP_129S1SvImJ_T0050248.1 MGP_129S1SvImJ_G0024607.1 mouse_genomes_project 18 85791059 85812317 - Cndp1 protein_coding retained_intron MGP_129S1SvImJ_T0050249.1 MGP_129S1SvImJ_G0024607.1 mouse_genomes_project 18 85793215 85812217 - Cndp1 protein_coding retained_intron MGP_129S1SvImJ_T0050072.1 MGP_129S1SvImJ_G0024552.1 mouse_genomes_project 18 74527056 74581179 - MGP_129S1SvImJ_P0050072 Mapk4 protein_coding protein_coding MGP_129S1SvImJ_T0050073.1 MGP_129S1SvImJ_G0024552.1 mouse_genomes_project 18 74527060 74668184 - MGP_129S1SvImJ_P0050073 Mapk4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050074.1 MGP_129S1SvImJ_G0024552.1 mouse_genomes_project 18 74571640 74669151 - Mapk4 protein_coding processed_transcript MGP_129S1SvImJ_T0049433.1 MGP_129S1SvImJ_G0024327.1 mouse_genomes_project 18 35883747 35893043 + MGP_129S1SvImJ_P0049433 Pcdhb19 protein_coding protein_coding MGP_129S1SvImJ_T0007057.1 MGP_129S1SvImJ_G0005803.1 mouse_genomes_project 18 82181090 82190892 - 4930594M17Rik lincRNA lincRNA MGP_129S1SvImJ_T0010288.1 MGP_129S1SvImJ_G0008404.1 mouse_genomes_project 18 76914821 76914922 + Mir6358 miRNA miRNA MGP_129S1SvImJ_T0049326.1 MGP_129S1SvImJ_G0024274.1 mouse_genomes_project 18 34381926 34416865 - MGP_129S1SvImJ_P0049326 Nrg2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0049327.1 MGP_129S1SvImJ_G0024274.1 mouse_genomes_project 18 34382009 34575508 - MGP_129S1SvImJ_P0049327 Nrg2 protein_coding protein_coding MGP_129S1SvImJ_T0049328.1 MGP_129S1SvImJ_G0024274.1 mouse_genomes_project 18 34382009 34575508 - MGP_129S1SvImJ_P0049328 Nrg2 protein_coding protein_coding MGP_129S1SvImJ_T0049329.1 MGP_129S1SvImJ_G0024274.1 mouse_genomes_project 18 34391756 34575360 - MGP_129S1SvImJ_P0049329 Nrg2 protein_coding protein_coding MGP_129S1SvImJ_T0049061.1 MGP_129S1SvImJ_G0024171.1 mouse_genomes_project 18 12263803 12364617 - MGP_129S1SvImJ_P0049061 Kctd1 protein_coding protein_coding MGP_129S1SvImJ_T0049062.1 MGP_129S1SvImJ_G0024171.1 mouse_genomes_project 18 12263803 12460308 - MGP_129S1SvImJ_P0049062 Kctd1 protein_coding protein_coding MGP_129S1SvImJ_T0050231.1 MGP_129S1SvImJ_G0024602.1 mouse_genomes_project 18 83635135 83737838 - MGP_129S1SvImJ_P0050231 Zfp236 protein_coding protein_coding MGP_129S1SvImJ_T0050232.1 MGP_129S1SvImJ_G0024602.1 mouse_genomes_project 18 83637014 83659856 - MGP_129S1SvImJ_P0050232 Zfp236 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050233.1 MGP_129S1SvImJ_G0024602.1 mouse_genomes_project 18 83638693 83733937 - MGP_129S1SvImJ_P0050233 Zfp236 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050234.1 MGP_129S1SvImJ_G0024602.1 mouse_genomes_project 18 83682118 83683300 - Zfp236 protein_coding retained_intron MGP_129S1SvImJ_T0050235.1 MGP_129S1SvImJ_G0024602.1 mouse_genomes_project 18 83732506 83743499 - MGP_129S1SvImJ_P0050235 Zfp236 protein_coding protein_coding MGP_129S1SvImJ_T0098738.1 MGP_129S1SvImJ_G0036823.1 mouse_genomes_project 18 75425403 75425482 - Scarna17 scaRNA scaRNA MGP_129S1SvImJ_T0049496.1 MGP_129S1SvImJ_G0024357.1 mouse_genomes_project 18 36380098 36383137 - Fchsd1 protein_coding retained_intron MGP_129S1SvImJ_T0049497.1 MGP_129S1SvImJ_G0024357.1 mouse_genomes_project 18 36380101 36392441 - MGP_129S1SvImJ_P0049497 Fchsd1 protein_coding protein_coding MGP_129S1SvImJ_T0049498.1 MGP_129S1SvImJ_G0024357.1 mouse_genomes_project 18 36385629 36386727 - Fchsd1 protein_coding retained_intron MGP_129S1SvImJ_T0049499.1 MGP_129S1SvImJ_G0024357.1 mouse_genomes_project 18 36388323 36392436 - MGP_129S1SvImJ_P0049499 Fchsd1 protein_coding protein_coding MGP_129S1SvImJ_T0049500.1 MGP_129S1SvImJ_G0024357.1 mouse_genomes_project 18 36388361 36390415 - Fchsd1 protein_coding retained_intron MGP_129S1SvImJ_T0049501.1 MGP_129S1SvImJ_G0024357.1 mouse_genomes_project 18 36390283 36390719 - Fchsd1 protein_coding retained_intron MGP_129S1SvImJ_T0049502.1 MGP_129S1SvImJ_G0024357.1 mouse_genomes_project 18 36390304 36392436 - MGP_129S1SvImJ_P0049502 Fchsd1 protein_coding protein_coding MGP_129S1SvImJ_T0049503.1 MGP_129S1SvImJ_G0024357.1 mouse_genomes_project 18 36390305 36392424 - Fchsd1 protein_coding retained_intron MGP_129S1SvImJ_T0049504.1 MGP_129S1SvImJ_G0024357.1 mouse_genomes_project 18 36390470 36392436 - MGP_129S1SvImJ_P0049504 Fchsd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049505.1 MGP_129S1SvImJ_G0024357.1 mouse_genomes_project 18 36390498 36392195 - Fchsd1 protein_coding retained_intron MGP_129S1SvImJ_T0048969.1 MGP_129S1SvImJ_G0024142.1 mouse_genomes_project 18 6622309 6812056 + MGP_129S1SvImJ_P0048969 Colec12 protein_coding protein_coding MGP_129S1SvImJ_T0049050.1 MGP_129S1SvImJ_G0024164.1 mouse_genomes_project 18 10194808 10217146 + MGP_129S1SvImJ_P0049050 Impact protein_coding protein_coding MGP_129S1SvImJ_T0049771.1 MGP_129S1SvImJ_G0024464.1 mouse_genomes_project 18 60387848 60403326 - MGP_129S1SvImJ_P0049771 Myoz3 protein_coding protein_coding MGP_129S1SvImJ_T0099587.1 MGP_129S1SvImJ_G0037654.1 mouse_genomes_project 18 4720958 4721064 + Gm24292 snRNA snRNA MGP_129S1SvImJ_T0010250.1 MGP_129S1SvImJ_G0008366.1 mouse_genomes_project 18 6758174 6758280 - Gm23637 miRNA miRNA MGP_129S1SvImJ_T0007044.1 MGP_129S1SvImJ_G0005793.1 mouse_genomes_project 18 61539094 61546846 + Bvht lincRNA lincRNA MGP_129S1SvImJ_T0007045.1 MGP_129S1SvImJ_G0005793.1 mouse_genomes_project 18 61539205 61547026 + Bvht lincRNA lincRNA MGP_129S1SvImJ_T0049032.1 MGP_129S1SvImJ_G0024162.1 mouse_genomes_project 18 9946806 9960451 + MGP_129S1SvImJ_P0049032 Cabyr protein_coding protein_coding MGP_129S1SvImJ_T0049033.1 MGP_129S1SvImJ_G0024162.1 mouse_genomes_project 18 9946829 9960445 + MGP_129S1SvImJ_P0049033 Cabyr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0049034.1 MGP_129S1SvImJ_G0024162.1 mouse_genomes_project 18 9946831 9960445 + MGP_129S1SvImJ_P0049034 Cabyr protein_coding protein_coding MGP_129S1SvImJ_T0049035.1 MGP_129S1SvImJ_G0024162.1 mouse_genomes_project 18 9946837 9960447 + MGP_129S1SvImJ_P0049035 Cabyr protein_coding protein_coding MGP_129S1SvImJ_T0049036.1 MGP_129S1SvImJ_G0024162.1 mouse_genomes_project 18 9946837 9960447 + MGP_129S1SvImJ_P0049036 Cabyr protein_coding protein_coding MGP_129S1SvImJ_T0049037.1 MGP_129S1SvImJ_G0024162.1 mouse_genomes_project 18 9946837 9960447 + MGP_129S1SvImJ_P0049037 Cabyr protein_coding protein_coding MGP_129S1SvImJ_T0051655.1 MGP_129S1SvImJ_G0025090.1 mouse_genomes_project 19 37213128 37253879 - MGP_129S1SvImJ_P0051655 Fra10ac1 protein_coding protein_coding MGP_129S1SvImJ_T0051006.1 MGP_129S1SvImJ_G0024811.1 mouse_genomes_project 19 6092047 6102306 - MGP_129S1SvImJ_P0051006 Ttc9c protein_coding protein_coding MGP_129S1SvImJ_T0051007.1 MGP_129S1SvImJ_G0024811.1 mouse_genomes_project 19 6094108 6101897 - MGP_129S1SvImJ_P0051007 Ttc9c protein_coding protein_coding MGP_129S1SvImJ_T0051008.1 MGP_129S1SvImJ_G0024811.1 mouse_genomes_project 19 6094268 6102267 - MGP_129S1SvImJ_P0051008 Ttc9c protein_coding protein_coding MGP_129S1SvImJ_T0051009.1 MGP_129S1SvImJ_G0024811.1 mouse_genomes_project 19 6101269 6102205 - Ttc9c protein_coding retained_intron MGP_129S1SvImJ_T0050673.1 MGP_129S1SvImJ_G0024740.1 mouse_genomes_project 19 3087169 3088736 + MGP_129S1SvImJ_P0050673 protein_coding protein_coding MGP_129S1SvImJ_T0050805.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3454635 3471959 + MGP_129S1SvImJ_P0050805 Rasgrp2 protein_coding protein_coding MGP_129S1SvImJ_T0050806.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3454751 3458929 + MGP_129S1SvImJ_P0050806 Rasgrp2 protein_coding protein_coding MGP_129S1SvImJ_T0050807.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3455041 3458781 + MGP_129S1SvImJ_P0050807 Rasgrp2 protein_coding protein_coding MGP_129S1SvImJ_T0050808.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3455159 3457870 + MGP_129S1SvImJ_P0050808 Rasgrp2 protein_coding protein_coding MGP_129S1SvImJ_T0050809.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3455163 3458774 + MGP_129S1SvImJ_P0050809 Rasgrp2 protein_coding protein_coding MGP_129S1SvImJ_T0050810.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3455169 3459633 + MGP_129S1SvImJ_P0050810 Rasgrp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050811.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3455212 3457742 + Rasgrp2 protein_coding processed_transcript MGP_129S1SvImJ_T0050812.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3455408 3458934 + MGP_129S1SvImJ_P0050812 Rasgrp2 protein_coding protein_coding MGP_129S1SvImJ_T0050813.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3455822 3457726 + Rasgrp2 protein_coding processed_transcript MGP_129S1SvImJ_T0050814.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3455828 3471954 + MGP_129S1SvImJ_P0050814 Rasgrp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050815.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3455842 3459717 + MGP_129S1SvImJ_P0050815 Rasgrp2 protein_coding protein_coding MGP_129S1SvImJ_T0050816.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3455857 3471965 + MGP_129S1SvImJ_P0050816 Rasgrp2 protein_coding protein_coding MGP_129S1SvImJ_T0050817.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3455859 3460120 + MGP_129S1SvImJ_P0050817 Rasgrp2 protein_coding protein_coding MGP_129S1SvImJ_T0050818.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3455878 3471964 + MGP_129S1SvImJ_P0050818 Rasgrp2 protein_coding protein_coding MGP_129S1SvImJ_T0050819.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3455918 3458908 + MGP_129S1SvImJ_P0050819 Rasgrp2 protein_coding protein_coding MGP_129S1SvImJ_T0050820.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3456990 3457742 + Rasgrp2 protein_coding processed_transcript MGP_129S1SvImJ_T0050821.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3456997 3458934 + MGP_129S1SvImJ_P0050821 Rasgrp2 protein_coding protein_coding MGP_129S1SvImJ_T0050822.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3457013 3458934 + MGP_129S1SvImJ_P0050822 Rasgrp2 protein_coding protein_coding MGP_129S1SvImJ_T0050823.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3457014 3458934 + Rasgrp2 protein_coding processed_transcript MGP_129S1SvImJ_T0050824.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3458213 3460267 + Rasgrp2 protein_coding retained_intron MGP_129S1SvImJ_T0050825.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3459877 3462357 + Rasgrp2 protein_coding retained_intron MGP_129S1SvImJ_T0050826.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3460036 3464964 + Rasgrp2 protein_coding retained_intron MGP_129S1SvImJ_T0050827.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3460122 3470753 + Rasgrp2 protein_coding retained_intron MGP_129S1SvImJ_T0050828.1 MGP_129S1SvImJ_G0024763.1 mouse_genomes_project 19 3463700 3471960 + Rasgrp2 protein_coding processed_transcript MGP_129S1SvImJ_T0052100.1 MGP_129S1SvImJ_G0025240.1 mouse_genomes_project 19 50141482 50690023 - MGP_129S1SvImJ_P0052100 protein_coding protein_coding MGP_129S1SvImJ_T0052101.1 MGP_129S1SvImJ_G0025240.1 mouse_genomes_project 19 50145841 50690023 - MGP_129S1SvImJ_P0052101 protein_coding protein_coding MGP_129S1SvImJ_T0052102.1 MGP_129S1SvImJ_G0025240.1 mouse_genomes_project 19 50149166 50257046 - MGP_129S1SvImJ_P0052102 protein_coding protein_coding MGP_129S1SvImJ_T0052103.1 MGP_129S1SvImJ_G0025240.1 mouse_genomes_project 19 50150861 50689862 - MGP_129S1SvImJ_P0052103 protein_coding protein_coding MGP_129S1SvImJ_T0051541.1 MGP_129S1SvImJ_G0025041.1 mouse_genomes_project 19 31259769 31309242 + MGP_129S1SvImJ_P0051541 Papss2 protein_coding protein_coding MGP_129S1SvImJ_T0051022.1 MGP_129S1SvImJ_G0024815.1 mouse_genomes_project 19 6133722 6136847 + MGP_129S1SvImJ_P0051022 Lrrn4cl protein_coding protein_coding MGP_129S1SvImJ_T0051936.1 MGP_129S1SvImJ_G0025190.1 mouse_genomes_project 19 45184419 45271264 - MGP_129S1SvImJ_P0051936 Fbxw4 protein_coding protein_coding MGP_129S1SvImJ_T0051938.1 MGP_129S1SvImJ_G0025190.1 mouse_genomes_project 19 45184784 45199577 - MGP_129S1SvImJ_P0051938 Fbxw4 protein_coding protein_coding MGP_129S1SvImJ_T0051939.1 MGP_129S1SvImJ_G0025190.1 mouse_genomes_project 19 45184965 45197952 - MGP_129S1SvImJ_P0051939 Fbxw4 protein_coding protein_coding MGP_129S1SvImJ_T0051940.1 MGP_129S1SvImJ_G0025190.1 mouse_genomes_project 19 45184967 45186061 - Fbxw4 protein_coding retained_intron MGP_129S1SvImJ_T0051941.1 MGP_129S1SvImJ_G0025190.1 mouse_genomes_project 19 45185011 45197952 - MGP_129S1SvImJ_P0051941 Fbxw4 protein_coding protein_coding MGP_129S1SvImJ_T0051942.1 MGP_129S1SvImJ_G0025190.1 mouse_genomes_project 19 45185082 45198771 - MGP_129S1SvImJ_P0051942 Fbxw4 protein_coding protein_coding MGP_129S1SvImJ_T0051943.1 MGP_129S1SvImJ_G0025190.1 mouse_genomes_project 19 45185932 45238392 - Fbxw4 protein_coding retained_intron MGP_129S1SvImJ_T0051944.1 MGP_129S1SvImJ_G0025190.1 mouse_genomes_project 19 45197570 45238392 - Fbxw4 protein_coding retained_intron MGP_129S1SvImJ_T0051945.1 MGP_129S1SvImJ_G0025190.1 mouse_genomes_project 19 45238127 45249610 - MGP_129S1SvImJ_P0051945 Fbxw4 protein_coding protein_coding MGP_129S1SvImJ_T0102372.1 MGP_129S1SvImJ_G0040206.1 mouse_genomes_project 19 6639811 6645389 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0099650.1 MGP_129S1SvImJ_G0037717.1 mouse_genomes_project 19 61798682 61798859 - Gm23102 snRNA snRNA MGP_129S1SvImJ_T0052292.1 MGP_129S1SvImJ_G0025299.1 mouse_genomes_project 19 61503874 61699661 + MGP_129S1SvImJ_P0052292 Grk5 protein_coding protein_coding MGP_129S1SvImJ_T0051516.1 MGP_129S1SvImJ_G0025035.1 mouse_genomes_project 19 29119360 30372511 - MGP_129S1SvImJ_P0051516 Prkg1 protein_coding protein_coding MGP_129S1SvImJ_T0051517.1 MGP_129S1SvImJ_G0025035.1 mouse_genomes_project 19 29120353 30273346 - MGP_129S1SvImJ_P0051517 Prkg1 protein_coding protein_coding MGP_129S1SvImJ_T0051518.1 MGP_129S1SvImJ_G0025035.1 mouse_genomes_project 19 29120767 29127268 - Prkg1 protein_coding processed_transcript MGP_129S1SvImJ_T0051519.1 MGP_129S1SvImJ_G0025035.1 mouse_genomes_project 19 29120769 29127268 - Prkg1 protein_coding processed_transcript MGP_129S1SvImJ_T0051520.1 MGP_129S1SvImJ_G0025035.1 mouse_genomes_project 19 29174979 29181106 - Prkg1 protein_coding processed_transcript MGP_129S1SvImJ_T0051521.1 MGP_129S1SvImJ_G0025035.1 mouse_genomes_project 19 29256952 29331968 - Prkg1 protein_coding retained_intron MGP_129S1SvImJ_T0051523.1 MGP_129S1SvImJ_G0025035.1 mouse_genomes_project 19 30349747 30372451 - MGP_129S1SvImJ_P0051523 Prkg1 protein_coding protein_coding MGP_129S1SvImJ_T0051072.1 MGP_129S1SvImJ_G0024838.1 mouse_genomes_project 19 7506398 7520381 + MGP_129S1SvImJ_P0051072 Fads1 protein_coding protein_coding MGP_129S1SvImJ_T0051836.1 MGP_129S1SvImJ_G0025151.1 mouse_genomes_project 19 42833941 42895818 + MGP_129S1SvImJ_P0051836 Cnnm1 protein_coding protein_coding MGP_129S1SvImJ_T0051837.1 MGP_129S1SvImJ_G0025151.1 mouse_genomes_project 19 42833950 42895773 + MGP_129S1SvImJ_P0051837 Cnnm1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0051838.1 MGP_129S1SvImJ_G0025152.1 mouse_genomes_project 19 42899669 42926133 - MGP_129S1SvImJ_P0051838 Got1 protein_coding protein_coding MGP_129S1SvImJ_T0051839.1 MGP_129S1SvImJ_G0025152.1 mouse_genomes_project 19 42899938 42917505 - MGP_129S1SvImJ_P0051839 Got1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051840.1 MGP_129S1SvImJ_G0025152.1 mouse_genomes_project 19 42900234 42906322 - Got1 protein_coding retained_intron MGP_129S1SvImJ_T0051841.1 MGP_129S1SvImJ_G0025152.1 mouse_genomes_project 19 42913725 42926013 - Got1 protein_coding processed_transcript MGP_129S1SvImJ_T0050281.1 MGP_129S1SvImJ_G0024621.1 mouse_genomes_project 19 5234 26648 - MGP_129S1SvImJ_P0050281 Ighmbp2 protein_coding protein_coding MGP_129S1SvImJ_T0050282.1 MGP_129S1SvImJ_G0024621.1 mouse_genomes_project 19 8620 26768 - MGP_129S1SvImJ_P0050282 Ighmbp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050283.1 MGP_129S1SvImJ_G0024621.1 mouse_genomes_project 19 9166 11526 - Ighmbp2 protein_coding retained_intron MGP_129S1SvImJ_T0051935.1 MGP_129S1SvImJ_G0025189.1 mouse_genomes_project 19 45166786 45184450 + MGP_129S1SvImJ_P0051935 Gm17018 protein_coding protein_coding MGP_129S1SvImJ_T0051937.1 MGP_129S1SvImJ_G0025189.1 mouse_genomes_project 19 45184447 45185934 + Gm17018 protein_coding antisense MGP_129S1SvImJ_T0011504.1 MGP_129S1SvImJ_G0009620.1 mouse_genomes_project 19 37974963 37975083 + Gm25838 misc_RNA misc_RNA MGP_129S1SvImJ_T0051203.1 MGP_129S1SvImJ_G0024888.1 mouse_genomes_project 19 9294866 9295918 + MGP_129S1SvImJ_P0051203 Olfr1420 protein_coding protein_coding MGP_129S1SvImJ_T0051886.1 MGP_129S1SvImJ_G0025165.1 mouse_genomes_project 19 43592769 43599742 - MGP_129S1SvImJ_P0051886 Bloc1s2 protein_coding protein_coding MGP_129S1SvImJ_T0051284.1 MGP_129S1SvImJ_G0024954.1 mouse_genomes_project 19 11515933 11516744 + MGP_129S1SvImJ_P0051284 protein_coding protein_coding MGP_129S1SvImJ_T0051220.1 MGP_129S1SvImJ_G0024905.1 mouse_genomes_project 19 9920520 9925026 + MGP_129S1SvImJ_P0051220 Mpeg1 protein_coding protein_coding MGP_129S1SvImJ_T0050301.1 MGP_129S1SvImJ_G0024628.1 mouse_genomes_project 19 488035 497584 + MGP_129S1SvImJ_P0050301 1810055G02Rik protein_coding protein_coding MGP_129S1SvImJ_T0050717.1 MGP_129S1SvImJ_G0024749.1 mouse_genomes_project 19 3146638 3149221 - MGP_129S1SvImJ_P0050717 Sac3d1 protein_coding protein_coding MGP_129S1SvImJ_T0051073.1 MGP_129S1SvImJ_G0024839.1 mouse_genomes_project 19 7522645 7527577 - MGP_129S1SvImJ_P0051073 Fen1 protein_coding protein_coding MGP_129S1SvImJ_T0051074.1 MGP_129S1SvImJ_G0024839.1 mouse_genomes_project 19 7522651 7527351 - MGP_129S1SvImJ_P0051074 Fen1 protein_coding protein_coding MGP_129S1SvImJ_T0051075.1 MGP_129S1SvImJ_G0024839.1 mouse_genomes_project 19 7522651 7527476 - MGP_129S1SvImJ_P0051075 Fen1 protein_coding protein_coding MGP_129S1SvImJ_T0051076.1 MGP_129S1SvImJ_G0024839.1 mouse_genomes_project 19 7522655 7527302 - MGP_129S1SvImJ_P0051076 Fen1 protein_coding protein_coding MGP_129S1SvImJ_T0051747.1 MGP_129S1SvImJ_G0025119.1 mouse_genomes_project 19 40321781 40337796 - MGP_129S1SvImJ_P0051747 Opalin protein_coding protein_coding MGP_129S1SvImJ_T0052044.1 MGP_129S1SvImJ_G0025218.1 mouse_genomes_project 19 46649643 46736644 - MGP_129S1SvImJ_P0052044 Nt5c2 protein_coding protein_coding MGP_129S1SvImJ_T0052045.1 MGP_129S1SvImJ_G0025218.1 mouse_genomes_project 19 46649643 46727090 - MGP_129S1SvImJ_P0052045 Nt5c2 protein_coding protein_coding MGP_129S1SvImJ_T0052046.1 MGP_129S1SvImJ_G0025218.1 mouse_genomes_project 19 46650640 46784730 - MGP_129S1SvImJ_P0052046 Nt5c2 protein_coding protein_coding MGP_129S1SvImJ_T0052047.1 MGP_129S1SvImJ_G0025218.1 mouse_genomes_project 19 46654316 46661321 - MGP_129S1SvImJ_P0052047 Nt5c2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051192.1 MGP_129S1SvImJ_G0024882.1 mouse_genomes_project 19 9059558 9077423 - MGP_129S1SvImJ_P0051192 Oosp1 protein_coding protein_coding MGP_129S1SvImJ_T0051193.1 MGP_129S1SvImJ_G0024882.1 mouse_genomes_project 19 9059633 9077301 - MGP_129S1SvImJ_P0051193 Oosp1 protein_coding protein_coding MGP_129S1SvImJ_T0051194.1 MGP_129S1SvImJ_G0024882.1 mouse_genomes_project 19 9059771 9077307 - MGP_129S1SvImJ_P0051194 Oosp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0003897.1 MGP_129S1SvImJ_G0003487.1 mouse_genomes_project 19 53998193 54003820 - Gm16299 antisense antisense MGP_129S1SvImJ_T0051225.1 MGP_129S1SvImJ_G0024908.1 mouse_genomes_project 19 10073201 10107610 + MGP_129S1SvImJ_P0051225 Gm4952 protein_coding protein_coding MGP_129S1SvImJ_T0051226.1 MGP_129S1SvImJ_G0024908.1 mouse_genomes_project 19 10073243 10108988 + MGP_129S1SvImJ_P0051226 Gm4952 protein_coding protein_coding MGP_129S1SvImJ_T0098346.1 MGP_129S1SvImJ_G0036431.1 mouse_genomes_project 19 14563387 14563944 + pseudogene pseudogene MGP_129S1SvImJ_T0010312.1 MGP_129S1SvImJ_G0008428.1 mouse_genomes_project 19 9322630 9322703 + Mir6994 miRNA miRNA MGP_129S1SvImJ_T0051513.1 MGP_129S1SvImJ_G0025032.1 mouse_genomes_project 19 28591038 28674216 - MGP_129S1SvImJ_P0051513 Gldc protein_coding protein_coding MGP_129S1SvImJ_T0051222.1 MGP_129S1SvImJ_G0024907.1 mouse_genomes_project 19 10041509 10063036 + MGP_129S1SvImJ_P0051222 Fam111a protein_coding protein_coding MGP_129S1SvImJ_T0051223.1 MGP_129S1SvImJ_G0024907.1 mouse_genomes_project 19 10041509 10063044 + MGP_129S1SvImJ_P0051223 Fam111a protein_coding protein_coding MGP_129S1SvImJ_T0051224.1 MGP_129S1SvImJ_G0024907.1 mouse_genomes_project 19 10046834 10063038 + MGP_129S1SvImJ_P0051224 Fam111a protein_coding protein_coding MGP_129S1SvImJ_T0052127.1 MGP_129S1SvImJ_G0025249.1 mouse_genomes_project 19 53839118 54045397 + MGP_129S1SvImJ_P0052127 Rbm20 protein_coding protein_coding MGP_129S1SvImJ_T0052128.1 MGP_129S1SvImJ_G0025249.1 mouse_genomes_project 19 53839118 54022159 + MGP_129S1SvImJ_P0052128 Rbm20 protein_coding protein_coding MGP_129S1SvImJ_T0052129.1 MGP_129S1SvImJ_G0025249.1 mouse_genomes_project 19 53971272 53992396 + Rbm20 protein_coding processed_transcript MGP_129S1SvImJ_T0052130.1 MGP_129S1SvImJ_G0025249.1 mouse_genomes_project 19 54021605 54045397 + MGP_129S1SvImJ_P0052130 Rbm20 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0010316.1 MGP_129S1SvImJ_G0008432.1 mouse_genomes_project 19 21277591 21277712 + Mir1192 miRNA miRNA MGP_129S1SvImJ_T0050746.1 MGP_129S1SvImJ_G0024757.1 mouse_genomes_project 19 3323237 3346874 + MGP_129S1SvImJ_P0050746 Ehd1 protein_coding protein_coding MGP_129S1SvImJ_T0050747.1 MGP_129S1SvImJ_G0024757.1 mouse_genomes_project 19 3323437 3327905 + Ehd1 protein_coding retained_intron MGP_129S1SvImJ_T0050748.1 MGP_129S1SvImJ_G0024757.1 mouse_genomes_project 19 3340995 3344655 + Ehd1 protein_coding retained_intron MGP_129S1SvImJ_T0050749.1 MGP_129S1SvImJ_G0024757.1 mouse_genomes_project 19 3344691 3345138 + Ehd1 protein_coding processed_transcript MGP_129S1SvImJ_T0051791.1 MGP_129S1SvImJ_G0025135.1 mouse_genomes_project 19 41347822 41357774 + MGP_129S1SvImJ_P0051791 Ankrd2 protein_coding protein_coding MGP_129S1SvImJ_T0051256.1 MGP_129S1SvImJ_G0024926.1 mouse_genomes_project 19 10608379 10609333 - MGP_129S1SvImJ_P0051256 Olfr1457 protein_coding protein_coding MGP_129S1SvImJ_T0051919.1 MGP_129S1SvImJ_G0025181.1 mouse_genomes_project 19 44554170 44572121 + MGP_129S1SvImJ_P0051919 Lzts2 protein_coding protein_coding MGP_129S1SvImJ_T0051920.1 MGP_129S1SvImJ_G0025181.1 mouse_genomes_project 19 44554204 44572121 + MGP_129S1SvImJ_P0051920 Lzts2 protein_coding protein_coding MGP_129S1SvImJ_T0051921.1 MGP_129S1SvImJ_G0025181.1 mouse_genomes_project 19 44559786 44572121 + MGP_129S1SvImJ_P0051921 Lzts2 protein_coding protein_coding MGP_129S1SvImJ_T0051751.1 MGP_129S1SvImJ_G0025122.1 mouse_genomes_project 19 40538502 40659126 - MGP_129S1SvImJ_P0051751 Pik3ap1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0050373.1 MGP_129S1SvImJ_G0024641.1 mouse_genomes_project 19 860959 865355 - MGP_129S1SvImJ_P0050373 Gstp1 protein_coding protein_coding MGP_129S1SvImJ_T0052050.1 MGP_129S1SvImJ_G0025221.1 mouse_genomes_project 19 46842564 46858868 + MGP_129S1SvImJ_P0052050 Taf5 protein_coding protein_coding MGP_129S1SvImJ_T0051710.1 MGP_129S1SvImJ_G0025111.1 mouse_genomes_project 19 39499149 39608062 - MGP_129S1SvImJ_P0051710 Sorbs1 protein_coding protein_coding MGP_129S1SvImJ_T0051711.1 MGP_129S1SvImJ_G0025111.1 mouse_genomes_project 19 39499149 39608062 - MGP_129S1SvImJ_P0051711 Sorbs1 protein_coding protein_coding MGP_129S1SvImJ_T0051712.1 MGP_129S1SvImJ_G0025111.1 mouse_genomes_project 19 39499149 39608062 - MGP_129S1SvImJ_P0051712 Sorbs1 protein_coding protein_coding MGP_129S1SvImJ_T0051713.1 MGP_129S1SvImJ_G0025111.1 mouse_genomes_project 19 39499149 39608062 - MGP_129S1SvImJ_P0051713 Sorbs1 protein_coding protein_coding MGP_129S1SvImJ_T0051714.1 MGP_129S1SvImJ_G0025111.1 mouse_genomes_project 19 39513588 39608062 - MGP_129S1SvImJ_P0051714 Sorbs1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0051081.1 MGP_129S1SvImJ_G0024841.1 mouse_genomes_project 19 7531679 7565462 - MGP_129S1SvImJ_P0051081 Myrf protein_coding protein_coding MGP_129S1SvImJ_T0051082.1 MGP_129S1SvImJ_G0024841.1 mouse_genomes_project 19 7532712 7565462 - Myrf protein_coding retained_intron MGP_129S1SvImJ_T0051083.1 MGP_129S1SvImJ_G0024841.1 mouse_genomes_project 19 7533111 7565459 - MGP_129S1SvImJ_P0051083 Myrf protein_coding protein_coding MGP_129S1SvImJ_T0051084.1 MGP_129S1SvImJ_G0024841.1 mouse_genomes_project 19 7533707 7540899 - MGP_129S1SvImJ_P0051084 Myrf protein_coding protein_coding MGP_129S1SvImJ_T0051085.1 MGP_129S1SvImJ_G0024841.1 mouse_genomes_project 19 7533792 7565318 - MGP_129S1SvImJ_P0051085 Myrf protein_coding protein_coding MGP_129S1SvImJ_T0051086.1 MGP_129S1SvImJ_G0024841.1 mouse_genomes_project 19 7549388 7565462 - Myrf protein_coding retained_intron MGP_129S1SvImJ_T0017744.1 MGP_129S1SvImJ_G0015385.1 mouse_genomes_project 19 25113493 25175021 - 4931403E22Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0007082.1 MGP_129S1SvImJ_G0005820.1 mouse_genomes_project 19 22258529 22260189 + 1700021P04Rik lincRNA lincRNA MGP_129S1SvImJ_T0050938.1 MGP_129S1SvImJ_G0024796.1 mouse_genomes_project 19 4763896 4766103 + Hrasls5 protein_coding retained_intron MGP_129S1SvImJ_T0050939.1 MGP_129S1SvImJ_G0024796.1 mouse_genomes_project 19 4763910 4790995 + MGP_129S1SvImJ_P0050939 Hrasls5 protein_coding protein_coding MGP_129S1SvImJ_T0050940.1 MGP_129S1SvImJ_G0024796.1 mouse_genomes_project 19 4763960 4791394 + MGP_129S1SvImJ_P0050940 Hrasls5 protein_coding protein_coding MGP_129S1SvImJ_T0051324.1 MGP_129S1SvImJ_G0024970.1 mouse_genomes_project 19 16645045 16792702 + MGP_129S1SvImJ_P0051324 Trpm6 protein_coding protein_coding MGP_129S1SvImJ_T0051929.1 MGP_129S1SvImJ_G0025185.1 mouse_genomes_project 19 44702990 44709258 + MGP_129S1SvImJ_P0051929 Tlx1 protein_coding protein_coding MGP_129S1SvImJ_T0051930.1 MGP_129S1SvImJ_G0025185.1 mouse_genomes_project 19 44703779 44708714 + MGP_129S1SvImJ_P0051930 Tlx1 protein_coding protein_coding MGP_129S1SvImJ_T0052058.1 MGP_129S1SvImJ_G0025228.1 mouse_genomes_project 19 46966287 47056259 + MGP_129S1SvImJ_P0052058 Neurl1a protein_coding protein_coding MGP_129S1SvImJ_T0052059.1 MGP_129S1SvImJ_G0025228.1 mouse_genomes_project 19 47022254 47056259 + MGP_129S1SvImJ_P0052059 Neurl1a protein_coding protein_coding MGP_129S1SvImJ_T0051465.1 MGP_129S1SvImJ_G0025020.1 mouse_genomes_project 19 27782894 27786256 - Rln1 protein_coding retained_intron MGP_129S1SvImJ_T0051466.1 MGP_129S1SvImJ_G0025020.1 mouse_genomes_project 19 27783409 27786374 - MGP_129S1SvImJ_P0051466 Rln1 protein_coding protein_coding MGP_129S1SvImJ_T0007092.1 MGP_129S1SvImJ_G0005825.1 mouse_genomes_project 19 31023767 31025735 + 2700046G09Rik lincRNA lincRNA MGP_129S1SvImJ_T0051272.1 MGP_129S1SvImJ_G0024942.1 mouse_genomes_project 19 11185993 11186935 + MGP_129S1SvImJ_P0051272 Olfr1489 protein_coding protein_coding MGP_129S1SvImJ_T0052250.1 MGP_129S1SvImJ_G0025277.1 mouse_genomes_project 19 58988151 59030796 + MGP_129S1SvImJ_P0052250 Ccdc172 protein_coding protein_coding MGP_129S1SvImJ_T0052278.1 MGP_129S1SvImJ_G0025294.1 mouse_genomes_project 19 61356600 61360535 + MGP_129S1SvImJ_P0052278 Nanos1 protein_coding protein_coding MGP_129S1SvImJ_T0050849.1 MGP_129S1SvImJ_G0024768.1 mouse_genomes_project 19 3996443 3999725 - Prdx5 protein_coding retained_intron MGP_129S1SvImJ_T0050850.1 MGP_129S1SvImJ_G0024768.1 mouse_genomes_project 19 3996452 3999853 - MGP_129S1SvImJ_P0050850 Prdx5 protein_coding protein_coding MGP_129S1SvImJ_T0050851.1 MGP_129S1SvImJ_G0024768.1 mouse_genomes_project 19 3996496 3998048 - MGP_129S1SvImJ_P0050851 Prdx5 protein_coding protein_coding MGP_129S1SvImJ_T0050852.1 MGP_129S1SvImJ_G0024768.1 mouse_genomes_project 19 3996592 3999364 - MGP_129S1SvImJ_P0050852 Prdx5 protein_coding protein_coding MGP_129S1SvImJ_T0050829.1 MGP_129S1SvImJ_G0024764.1 mouse_genomes_project 19 3475479 3602297 + MGP_129S1SvImJ_P0050829 Nrxn2 protein_coding protein_coding MGP_129S1SvImJ_T0050830.1 MGP_129S1SvImJ_G0024764.1 mouse_genomes_project 19 3475486 3529400 + Nrxn2 protein_coding retained_intron MGP_129S1SvImJ_T0050831.1 MGP_129S1SvImJ_G0024764.1 mouse_genomes_project 19 3475486 3602296 + MGP_129S1SvImJ_P0050831 Nrxn2 protein_coding protein_coding MGP_129S1SvImJ_T0050832.1 MGP_129S1SvImJ_G0024764.1 mouse_genomes_project 19 3475513 3601358 + MGP_129S1SvImJ_P0050832 Nrxn2 protein_coding protein_coding MGP_129S1SvImJ_T0050833.1 MGP_129S1SvImJ_G0024764.1 mouse_genomes_project 19 3485849 3602297 + MGP_129S1SvImJ_P0050833 Nrxn2 protein_coding protein_coding MGP_129S1SvImJ_T0050834.1 MGP_129S1SvImJ_G0024764.1 mouse_genomes_project 19 3486558 3537287 + MGP_129S1SvImJ_P0050834 Nrxn2 protein_coding protein_coding MGP_129S1SvImJ_T0050835.1 MGP_129S1SvImJ_G0024764.1 mouse_genomes_project 19 3486679 3538246 + MGP_129S1SvImJ_P0050835 Nrxn2 protein_coding protein_coding MGP_129S1SvImJ_T0050836.1 MGP_129S1SvImJ_G0024764.1 mouse_genomes_project 19 3508109 3538260 + Nrxn2 protein_coding processed_transcript MGP_129S1SvImJ_T0050837.1 MGP_129S1SvImJ_G0024764.1 mouse_genomes_project 19 3508947 3538358 + Nrxn2 protein_coding processed_transcript MGP_129S1SvImJ_T0050838.1 MGP_129S1SvImJ_G0024764.1 mouse_genomes_project 19 3517220 3547551 + Nrxn2 protein_coding retained_intron MGP_129S1SvImJ_T0050839.1 MGP_129S1SvImJ_G0024764.1 mouse_genomes_project 19 3538015 3547550 + Nrxn2 protein_coding retained_intron MGP_129S1SvImJ_T0050840.1 MGP_129S1SvImJ_G0024764.1 mouse_genomes_project 19 3567101 3578945 + Nrxn2 protein_coding processed_transcript MGP_129S1SvImJ_T0050841.1 MGP_129S1SvImJ_G0024764.1 mouse_genomes_project 19 3567258 3602297 + MGP_129S1SvImJ_P0050841 Nrxn2 protein_coding protein_coding MGP_129S1SvImJ_T0050842.1 MGP_129S1SvImJ_G0024764.1 mouse_genomes_project 19 3567265 3613249 + MGP_129S1SvImJ_P0050842 Nrxn2 protein_coding protein_coding MGP_129S1SvImJ_T0050843.1 MGP_129S1SvImJ_G0024764.1 mouse_genomes_project 19 3586284 3601376 + Nrxn2 protein_coding processed_transcript MGP_129S1SvImJ_T0010344.1 MGP_129S1SvImJ_G0008460.1 mouse_genomes_project 19 61165123 61165212 + Gm25238 miRNA miRNA MGP_129S1SvImJ_T0051087.1 MGP_129S1SvImJ_G0024842.1 mouse_genomes_project 19 7569978 7632892 - MGP_129S1SvImJ_P0051087 Dagla protein_coding protein_coding MGP_129S1SvImJ_T0051088.1 MGP_129S1SvImJ_G0024842.1 mouse_genomes_project 19 7569981 7632872 - MGP_129S1SvImJ_P0051088 Dagla protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051089.1 MGP_129S1SvImJ_G0024842.1 mouse_genomes_project 19 7578043 7582723 - Dagla protein_coding processed_transcript MGP_129S1SvImJ_T0051269.1 MGP_129S1SvImJ_G0024939.1 mouse_genomes_project 19 11015501 11016446 - MGP_129S1SvImJ_P0051269 Olfr1475 protein_coding protein_coding MGP_129S1SvImJ_T0051686.1 MGP_129S1SvImJ_G0025100.1 mouse_genomes_project 19 38391855 38450268 + MGP_129S1SvImJ_P0051686 Cyp2c29 protein_coding protein_coding MGP_129S1SvImJ_T0051687.1 MGP_129S1SvImJ_G0025100.1 mouse_genomes_project 19 38402398 38450319 + MGP_129S1SvImJ_P0051687 Cyp2c29 protein_coding protein_coding MGP_129S1SvImJ_T0051688.1 MGP_129S1SvImJ_G0025100.1 mouse_genomes_project 19 38402398 38450333 + MGP_129S1SvImJ_P0051688 Cyp2c29 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0007122.1 MGP_129S1SvImJ_G0005847.1 mouse_genomes_project 19 59086879 59113144 + 1810007D17Rik lincRNA lincRNA MGP_129S1SvImJ_T0051690.1 MGP_129S1SvImJ_G0025102.1 mouse_genomes_project 19 38630183 38680584 + MGP_129S1SvImJ_P0051690 Cyp2c39 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0051691.1 MGP_129S1SvImJ_G0025102.1 mouse_genomes_project 19 38630191 38679540 + MGP_129S1SvImJ_P0051691 Cyp2c39 protein_coding protein_coding MGP_129S1SvImJ_T0050557.1 MGP_129S1SvImJ_G0024704.1 mouse_genomes_project 19 2389724 2390843 - Drap1 protein_coding retained_intron MGP_129S1SvImJ_T0050558.1 MGP_129S1SvImJ_G0024704.1 mouse_genomes_project 19 2389728 2391140 - Drap1 protein_coding retained_intron MGP_129S1SvImJ_T0050559.1 MGP_129S1SvImJ_G0024704.1 mouse_genomes_project 19 2389746 2391834 - Drap1 protein_coding retained_intron MGP_129S1SvImJ_T0050560.1 MGP_129S1SvImJ_G0024704.1 mouse_genomes_project 19 2389746 2391979 - MGP_129S1SvImJ_P0050560 Drap1 protein_coding protein_coding MGP_129S1SvImJ_T0050561.1 MGP_129S1SvImJ_G0024704.1 mouse_genomes_project 19 2389780 2391001 - Drap1 protein_coding retained_intron MGP_129S1SvImJ_T0050562.1 MGP_129S1SvImJ_G0024704.1 mouse_genomes_project 19 2389839 2391761 - MGP_129S1SvImJ_P0050562 Drap1 protein_coding protein_coding MGP_129S1SvImJ_T0050563.1 MGP_129S1SvImJ_G0024704.1 mouse_genomes_project 19 2390526 2391826 - Drap1 protein_coding retained_intron MGP_129S1SvImJ_T0013372.1 MGP_129S1SvImJ_G0011461.1 mouse_genomes_project 19 2382127 2382322 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0051153.1 MGP_129S1SvImJ_G0024868.1 mouse_genomes_project 19 8449262 8462859 - MGP_129S1SvImJ_P0051153 Ms4a8a protein_coding protein_coding MGP_129S1SvImJ_T0051154.1 MGP_129S1SvImJ_G0024868.1 mouse_genomes_project 19 8457323 8462859 - Ms4a8a protein_coding retained_intron MGP_129S1SvImJ_T0003894.1 MGP_129S1SvImJ_G0003484.1 mouse_genomes_project 19 45372245 45374955 + Gm15491 antisense antisense MGP_129S1SvImJ_T0010298.1 MGP_129S1SvImJ_G0008414.1 mouse_genomes_project 19 2663622 2663695 - Mir6987 miRNA miRNA MGP_129S1SvImJ_T0100882.1 MGP_129S1SvImJ_G0038949.1 mouse_genomes_project 19 908343 908558 - Gm23927 snoRNA snoRNA MGP_129S1SvImJ_T0099641.1 MGP_129S1SvImJ_G0037708.1 mouse_genomes_project 19 36174413 36174516 - Gm25268 snRNA snRNA MGP_129S1SvImJ_T0100889.1 MGP_129S1SvImJ_G0038956.1 mouse_genomes_project 19 5994026 5994093 + Gm23246 snoRNA snoRNA MGP_129S1SvImJ_T0050624.1 MGP_129S1SvImJ_G0024722.1 mouse_genomes_project 19 2673539 2687271 + MGP_129S1SvImJ_P0050624 Map3k11 protein_coding protein_coding MGP_129S1SvImJ_T0050606.1 MGP_129S1SvImJ_G0024718.1 mouse_genomes_project 19 2584842 2591920 - MGP_129S1SvImJ_P0050606 Kat5 protein_coding protein_coding MGP_129S1SvImJ_T0007120.1 MGP_129S1SvImJ_G0005845.1 mouse_genomes_project 19 55927827 55996717 - lincRNA lincRNA MGP_129S1SvImJ_T0100894.1 MGP_129S1SvImJ_G0038961.1 mouse_genomes_project 19 11188471 11188603 - Gm24124 snoRNA snoRNA MGP_129S1SvImJ_T0051338.1 MGP_129S1SvImJ_G0024975.1 mouse_genomes_project 19 18781410 18965919 - MGP_129S1SvImJ_P0051338 Tmc1 protein_coding protein_coding MGP_129S1SvImJ_T0050925.1 MGP_129S1SvImJ_G0024792.1 mouse_genomes_project 19 4562533 4622684 - MGP_129S1SvImJ_P0050925 Rtn3 protein_coding protein_coding MGP_129S1SvImJ_T0050926.1 MGP_129S1SvImJ_G0024792.1 mouse_genomes_project 19 4562533 4622684 - MGP_129S1SvImJ_P0050926 Rtn3 protein_coding protein_coding MGP_129S1SvImJ_T0050927.1 MGP_129S1SvImJ_G0024792.1 mouse_genomes_project 19 4562533 4622676 - MGP_129S1SvImJ_P0050927 Rtn3 protein_coding protein_coding MGP_129S1SvImJ_T0050928.1 MGP_129S1SvImJ_G0024792.1 mouse_genomes_project 19 4563660 4622614 - MGP_129S1SvImJ_P0050928 Rtn3 protein_coding protein_coding MGP_129S1SvImJ_T0052274.1 MGP_129S1SvImJ_G0025292.1 mouse_genomes_project 19 61039045 61040611 - MGP_129S1SvImJ_P0052274 Prlhr protein_coding protein_coding MGP_129S1SvImJ_T0050294.1 MGP_129S1SvImJ_G0024626.1 mouse_genomes_project 19 215215 340244 - MGP_129S1SvImJ_P0050294 Ppp6r3 protein_coding protein_coding MGP_129S1SvImJ_T0050295.1 MGP_129S1SvImJ_G0024626.1 mouse_genomes_project 19 215215 340244 - MGP_129S1SvImJ_P0050295 Ppp6r3 protein_coding protein_coding MGP_129S1SvImJ_T0050296.1 MGP_129S1SvImJ_G0024626.1 mouse_genomes_project 19 215215 340244 - MGP_129S1SvImJ_P0050296 Ppp6r3 protein_coding protein_coding MGP_129S1SvImJ_T0051265.1 MGP_129S1SvImJ_G0024935.1 mouse_genomes_project 19 10927219 10928149 + MGP_129S1SvImJ_P0051265 Olfr1469 protein_coding protein_coding MGP_129S1SvImJ_T0051096.1 MGP_129S1SvImJ_G0024846.1 mouse_genomes_project 19 7841326 7870487 - MGP_129S1SvImJ_P0051096 Sdhaf2 protein_coding protein_coding MGP_129S1SvImJ_T0051649.1 MGP_129S1SvImJ_G0025087.1 mouse_genomes_project 19 37115083 37134834 + MGP_129S1SvImJ_P0051649 Ffar4 protein_coding protein_coding MGP_129S1SvImJ_T0051112.1 MGP_129S1SvImJ_G0024856.1 mouse_genomes_project 19 8077506 8098382 - MGP_129S1SvImJ_P0051112 Cd5 protein_coding protein_coding MGP_129S1SvImJ_T0051206.1 MGP_129S1SvImJ_G0024891.1 mouse_genomes_project 19 9446521 9447454 - MGP_129S1SvImJ_P0051206 Olfr1423 protein_coding protein_coding MGP_129S1SvImJ_T0010340.1 MGP_129S1SvImJ_G0008456.1 mouse_genomes_project 19 53118897 53118998 - Mir6407 miRNA miRNA MGP_129S1SvImJ_T0051768.1 MGP_129S1SvImJ_G0025131.1 mouse_genomes_project 19 41226521 41236631 - MGP_129S1SvImJ_P0051768 Exosc1 protein_coding protein_coding MGP_129S1SvImJ_T0051769.1 MGP_129S1SvImJ_G0025131.1 mouse_genomes_project 19 41226521 41236631 - MGP_129S1SvImJ_P0051769 Exosc1 protein_coding protein_coding MGP_129S1SvImJ_T0051682.1 MGP_129S1SvImJ_G0025097.1 mouse_genomes_project 19 38125265 38174113 + MGP_129S1SvImJ_P0051682 Cyp2c55 protein_coding protein_coding MGP_129S1SvImJ_T0050728.1 MGP_129S1SvImJ_G0024752.1 mouse_genomes_project 19 3172662 3209202 + Batf2 protein_coding processed_transcript MGP_129S1SvImJ_T0050729.1 MGP_129S1SvImJ_G0024752.1 mouse_genomes_project 19 3201167 3209205 + MGP_129S1SvImJ_P0050729 Batf2 protein_coding protein_coding MGP_129S1SvImJ_T0050730.1 MGP_129S1SvImJ_G0024752.1 mouse_genomes_project 19 3201182 3208497 + Batf2 protein_coding retained_intron MGP_129S1SvImJ_T0050731.1 MGP_129S1SvImJ_G0024752.1 mouse_genomes_project 19 3201182 3208096 + Batf2 protein_coding retained_intron MGP_129S1SvImJ_T0050732.1 MGP_129S1SvImJ_G0024752.1 mouse_genomes_project 19 3201188 3208487 + Batf2 protein_coding processed_transcript MGP_129S1SvImJ_T0050733.1 MGP_129S1SvImJ_G0024752.1 mouse_genomes_project 19 3201217 3208096 + Batf2 protein_coding retained_intron MGP_129S1SvImJ_T0051606.1 MGP_129S1SvImJ_G0025073.1 mouse_genomes_project 19 35627997 35632914 - MGP_129S1SvImJ_P0051606 Ppp1r3c protein_coding protein_coding MGP_129S1SvImJ_T0052027.1 MGP_129S1SvImJ_G0025210.1 mouse_genomes_project 19 46199212 46232023 + MGP_129S1SvImJ_P0052027 Trim8 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0052028.1 MGP_129S1SvImJ_G0025210.1 mouse_genomes_project 19 46204390 46232803 + MGP_129S1SvImJ_P0052028 Trim8 protein_coding protein_coding MGP_129S1SvImJ_T0099649.1 MGP_129S1SvImJ_G0037716.1 mouse_genomes_project 19 53286267 53286374 - Gm24724 snRNA snRNA MGP_129S1SvImJ_T0050414.1 MGP_129S1SvImJ_G0024652.1 mouse_genomes_project 19 995774 1003695 - MGP_129S1SvImJ_P0050414 Rps6kb2 protein_coding protein_coding MGP_129S1SvImJ_T0050415.1 MGP_129S1SvImJ_G0024652.1 mouse_genomes_project 19 995780 1003746 - MGP_129S1SvImJ_P0050415 Rps6kb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050416.1 MGP_129S1SvImJ_G0024652.1 mouse_genomes_project 19 995783 1003766 - Rps6kb2 protein_coding retained_intron MGP_129S1SvImJ_T0050417.1 MGP_129S1SvImJ_G0024652.1 mouse_genomes_project 19 995783 997141 - Rps6kb2 protein_coding retained_intron MGP_129S1SvImJ_T0050418.1 MGP_129S1SvImJ_G0024652.1 mouse_genomes_project 19 995783 1003750 - MGP_129S1SvImJ_P0050418 Rps6kb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050419.1 MGP_129S1SvImJ_G0024652.1 mouse_genomes_project 19 995974 1002780 - Rps6kb2 protein_coding processed_transcript MGP_129S1SvImJ_T0050420.1 MGP_129S1SvImJ_G0024652.1 mouse_genomes_project 19 995974 1003735 - MGP_129S1SvImJ_P0050420 Rps6kb2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050421.1 MGP_129S1SvImJ_G0024652.1 mouse_genomes_project 19 1002709 1003750 - Rps6kb2 protein_coding processed_transcript MGP_129S1SvImJ_T0050422.1 MGP_129S1SvImJ_G0024652.1 mouse_genomes_project 19 1002966 1003780 - Rps6kb2 protein_coding retained_intron MGP_129S1SvImJ_T0050423.1 MGP_129S1SvImJ_G0024652.1 mouse_genomes_project 19 1003264 1003804 - Rps6kb2 protein_coding processed_transcript MGP_129S1SvImJ_T0050404.1 MGP_129S1SvImJ_G0024650.1 mouse_genomes_project 19 986178 993024 + MGP_129S1SvImJ_P0050404 Coro1b protein_coding protein_coding MGP_129S1SvImJ_T0050405.1 MGP_129S1SvImJ_G0024650.1 mouse_genomes_project 19 986178 988064 + MGP_129S1SvImJ_P0050405 Coro1b protein_coding protein_coding MGP_129S1SvImJ_T0050406.1 MGP_129S1SvImJ_G0024650.1 mouse_genomes_project 19 986187 987114 + Coro1b protein_coding retained_intron MGP_129S1SvImJ_T0050407.1 MGP_129S1SvImJ_G0024650.1 mouse_genomes_project 19 986191 987194 + Coro1b protein_coding retained_intron MGP_129S1SvImJ_T0050408.1 MGP_129S1SvImJ_G0024650.1 mouse_genomes_project 19 986220 989059 + Coro1b protein_coding processed_transcript MGP_129S1SvImJ_T0050409.1 MGP_129S1SvImJ_G0024650.1 mouse_genomes_project 19 986223 987813 + Coro1b protein_coding retained_intron MGP_129S1SvImJ_T0050410.1 MGP_129S1SvImJ_G0024650.1 mouse_genomes_project 19 988102 991797 + Coro1b protein_coding retained_intron MGP_129S1SvImJ_T0050411.1 MGP_129S1SvImJ_G0024650.1 mouse_genomes_project 19 988929 992433 + Coro1b protein_coding retained_intron MGP_129S1SvImJ_T0050412.1 MGP_129S1SvImJ_G0024650.1 mouse_genomes_project 19 989139 992650 + Coro1b protein_coding retained_intron MGP_129S1SvImJ_T0007076.1 MGP_129S1SvImJ_G0005815.1 mouse_genomes_project 19 8744017 8747344 + lincRNA lincRNA MGP_129S1SvImJ_T0010345.1 MGP_129S1SvImJ_G0008461.1 mouse_genomes_project 19 61375371 61375440 - Mir3084-2 miRNA miRNA MGP_129S1SvImJ_T0051066.1 MGP_129S1SvImJ_G0024835.1 mouse_genomes_project 19 7321842 7336740 + MGP_129S1SvImJ_P0051066 Rab3il1 protein_coding protein_coding MGP_129S1SvImJ_T0051067.1 MGP_129S1SvImJ_G0024835.1 mouse_genomes_project 19 7325019 7344619 + MGP_129S1SvImJ_P0051067 Rab3il1 protein_coding protein_coding MGP_129S1SvImJ_T0051068.1 MGP_129S1SvImJ_G0024835.1 mouse_genomes_project 19 7325174 7344625 + MGP_129S1SvImJ_P0051068 Rab3il1 protein_coding protein_coding MGP_129S1SvImJ_T0051069.1 MGP_129S1SvImJ_G0024835.1 mouse_genomes_project 19 7340833 7342974 + Rab3il1 protein_coding retained_intron MGP_129S1SvImJ_T0050643.1 MGP_129S1SvImJ_G0024730.1 mouse_genomes_project 19 2882670 2890620 + MGP_129S1SvImJ_P0050643 Slc25a45 protein_coding protein_coding MGP_129S1SvImJ_T0050644.1 MGP_129S1SvImJ_G0024730.1 mouse_genomes_project 19 2883481 2885450 + MGP_129S1SvImJ_P0050644 Slc25a45 protein_coding protein_coding MGP_129S1SvImJ_T0050645.1 MGP_129S1SvImJ_G0024730.1 mouse_genomes_project 19 2883508 2890626 + MGP_129S1SvImJ_P0050645 Slc25a45 protein_coding protein_coding MGP_129S1SvImJ_T0050646.1 MGP_129S1SvImJ_G0024730.1 mouse_genomes_project 19 2883509 2889339 + MGP_129S1SvImJ_P0050646 Slc25a45 protein_coding protein_coding MGP_129S1SvImJ_T0051178.1 MGP_129S1SvImJ_G0024877.1 mouse_genomes_project 19 8757272 8782621 + MGP_129S1SvImJ_P0051178 Ms4a4a protein_coding protein_coding MGP_129S1SvImJ_T0052008.1 MGP_129S1SvImJ_G0025203.1 mouse_genomes_project 19 45985842 45993056 + MGP_129S1SvImJ_P0052008 Nfkb2 protein_coding protein_coding MGP_129S1SvImJ_T0052009.1 MGP_129S1SvImJ_G0025203.1 mouse_genomes_project 19 45986800 45993056 + MGP_129S1SvImJ_P0052009 Nfkb2 protein_coding protein_coding MGP_129S1SvImJ_T0010313.1 MGP_129S1SvImJ_G0008429.1 mouse_genomes_project 19 14040705 14040818 - Mir496b miRNA miRNA MGP_129S1SvImJ_T0011501.1 MGP_129S1SvImJ_G0009617.1 mouse_genomes_project 19 31648882 31649241 - Gm22482 misc_RNA misc_RNA MGP_129S1SvImJ_T0051253.1 MGP_129S1SvImJ_G0024923.1 mouse_genomes_project 19 10499741 10500674 + MGP_129S1SvImJ_P0051253 Olfr1451 protein_coding protein_coding MGP_129S1SvImJ_T0051900.1 MGP_129S1SvImJ_G0025173.1 mouse_genomes_project 19 44043696 44052800 - MGP_129S1SvImJ_P0051900 Gm20538 protein_coding protein_coding MGP_129S1SvImJ_T0052090.1 MGP_129S1SvImJ_G0025235.1 mouse_genomes_project 19 47713018 47727109 + MGP_129S1SvImJ_P0052090 Gsto1 protein_coding protein_coding MGP_129S1SvImJ_T0052091.1 MGP_129S1SvImJ_G0025235.1 mouse_genomes_project 19 47713131 47713774 + Gsto1 protein_coding retained_intron MGP_129S1SvImJ_T0052092.1 MGP_129S1SvImJ_G0025235.1 mouse_genomes_project 19 47725313 47726886 + Gsto1 protein_coding retained_intron MGP_129S1SvImJ_T0051543.1 MGP_129S1SvImJ_G0025043.1 mouse_genomes_project 19 31414033 31488250 + MGP_129S1SvImJ_P0051543 Pten protein_coding protein_coding MGP_129S1SvImJ_T0051544.1 MGP_129S1SvImJ_G0025043.1 mouse_genomes_project 19 31414131 31464261 + Pten protein_coding retained_intron MGP_129S1SvImJ_T0051545.1 MGP_129S1SvImJ_G0025043.1 mouse_genomes_project 19 31472636 31479389 + Pten protein_coding retained_intron MGP_129S1SvImJ_T0007104.1 MGP_129S1SvImJ_G0005835.1 mouse_genomes_project 19 44882086 44897923 - Gm29595 lincRNA lincRNA MGP_129S1SvImJ_T0007105.1 MGP_129S1SvImJ_G0005835.1 mouse_genomes_project 19 44882095 44885769 - Gm29595 lincRNA lincRNA MGP_129S1SvImJ_T0051252.1 MGP_129S1SvImJ_G0024922.1 mouse_genomes_project 19 10457565 10458543 + MGP_129S1SvImJ_P0051252 Olfr1450 protein_coding protein_coding MGP_129S1SvImJ_T0051059.1 MGP_129S1SvImJ_G0024830.1 mouse_genomes_project 19 6406410 6442943 - MGP_129S1SvImJ_P0051059 Asrgl1 protein_coding protein_coding MGP_129S1SvImJ_T0051060.1 MGP_129S1SvImJ_G0024830.1 mouse_genomes_project 19 6438739 6442838 - Asrgl1 protein_coding processed_transcript MGP_129S1SvImJ_T0098708.1 MGP_129S1SvImJ_G0036793.1 mouse_genomes_project 19 36085098 36085176 - Gm22714 ribozyme ribozyme MGP_129S1SvImJ_T0051215.1 MGP_129S1SvImJ_G0024900.1 mouse_genomes_project 19 9737289 9749076 + MGP_129S1SvImJ_P0051215 protein_coding protein_coding MGP_129S1SvImJ_T0051025.1 MGP_129S1SvImJ_G0024817.1 mouse_genomes_project 19 6164288 6165206 - MGP_129S1SvImJ_P0051025 Uqcc3 protein_coding protein_coding MGP_129S1SvImJ_T0099634.1 MGP_129S1SvImJ_G0037701.1 mouse_genomes_project 19 16626755 16627594 + Gm23238 snRNA snRNA MGP_129S1SvImJ_T0051865.1 MGP_129S1SvImJ_G0025160.1 mouse_genomes_project 19 43394157 43431747 - MGP_129S1SvImJ_P0051865 Cpn1 protein_coding protein_coding MGP_129S1SvImJ_T0051866.1 MGP_129S1SvImJ_G0025160.1 mouse_genomes_project 19 43399899 43406301 - Cpn1 protein_coding retained_intron MGP_129S1SvImJ_T0003874.1 MGP_129S1SvImJ_G0003470.1 mouse_genomes_project 19 3612850 3613979 - Gm14967 antisense antisense MGP_129S1SvImJ_T0013407.1 MGP_129S1SvImJ_G0011496.1 mouse_genomes_project 19 45880065 45880542 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0051098.1 MGP_129S1SvImJ_G0024848.1 mouse_genomes_project 19 7881034 7902363 - MGP_129S1SvImJ_P0051098 Tmem216 protein_coding protein_coding MGP_129S1SvImJ_T0051099.1 MGP_129S1SvImJ_G0024848.1 mouse_genomes_project 19 7886572 7902378 - MGP_129S1SvImJ_P0051099 Tmem216 protein_coding protein_coding MGP_129S1SvImJ_T0051100.1 MGP_129S1SvImJ_G0024848.1 mouse_genomes_project 19 7897087 7902865 - MGP_129S1SvImJ_P0051100 Tmem216 protein_coding protein_coding MGP_129S1SvImJ_T0051101.1 MGP_129S1SvImJ_G0024848.1 mouse_genomes_project 19 7897118 7902378 - MGP_129S1SvImJ_P0051101 Tmem216 protein_coding protein_coding MGP_129S1SvImJ_T0051102.1 MGP_129S1SvImJ_G0024848.1 mouse_genomes_project 19 7897176 7902378 - MGP_129S1SvImJ_P0051102 Tmem216 protein_coding protein_coding MGP_129S1SvImJ_T0051103.1 MGP_129S1SvImJ_G0024848.1 mouse_genomes_project 19 7901373 7902378 - Tmem216 protein_coding retained_intron MGP_129S1SvImJ_T0051738.1 MGP_129S1SvImJ_G0025115.1 mouse_genomes_project 19 40074330 40092154 + MGP_129S1SvImJ_P0051738 Ccnj protein_coding protein_coding MGP_129S1SvImJ_T0051739.1 MGP_129S1SvImJ_G0025115.1 mouse_genomes_project 19 40074330 40092154 + MGP_129S1SvImJ_P0051739 Ccnj protein_coding protein_coding MGP_129S1SvImJ_T0051740.1 MGP_129S1SvImJ_G0025115.1 mouse_genomes_project 19 40074359 40091591 + MGP_129S1SvImJ_P0051740 Ccnj protein_coding protein_coding MGP_129S1SvImJ_T0052122.1 MGP_129S1SvImJ_G0025246.1 mouse_genomes_project 19 53529810 53541189 - MGP_129S1SvImJ_P0052122 Smndc1 protein_coding protein_coding MGP_129S1SvImJ_T0050526.1 MGP_129S1SvImJ_G0024687.1 mouse_genomes_project 19 1967598 1976016 + MGP_129S1SvImJ_P0050526 Brms1 protein_coding protein_coding MGP_129S1SvImJ_T0051820.1 MGP_129S1SvImJ_G0025147.1 mouse_genomes_project 19 41932413 41951455 - MGP_129S1SvImJ_P0051820 Loxl4 protein_coding protein_coding MGP_129S1SvImJ_T0051821.1 MGP_129S1SvImJ_G0025147.1 mouse_genomes_project 19 41933537 41951455 - MGP_129S1SvImJ_P0051821 Loxl4 protein_coding protein_coding MGP_129S1SvImJ_T0051822.1 MGP_129S1SvImJ_G0025147.1 mouse_genomes_project 19 41933765 41946941 - MGP_129S1SvImJ_P0051822 Loxl4 protein_coding protein_coding MGP_129S1SvImJ_T0051823.1 MGP_129S1SvImJ_G0025147.1 mouse_genomes_project 19 41939984 41941763 - Loxl4 protein_coding processed_transcript MGP_129S1SvImJ_T0051824.1 MGP_129S1SvImJ_G0025147.1 mouse_genomes_project 19 41946039 41951414 - MGP_129S1SvImJ_P0051824 Loxl4 protein_coding protein_coding MGP_129S1SvImJ_T0011500.1 MGP_129S1SvImJ_G0009616.1 mouse_genomes_project 19 29250616 29250934 + Gm23426 misc_RNA misc_RNA MGP_129S1SvImJ_T0051843.1 MGP_129S1SvImJ_G0025154.1 mouse_genomes_project 19 43074196 43085217 - MGP_129S1SvImJ_P0051843 Slc25a28 protein_coding protein_coding MGP_129S1SvImJ_T0051650.1 MGP_129S1SvImJ_G0025088.1 mouse_genomes_project 19 37137191 37145795 - MGP_129S1SvImJ_P0051650 Rbp4 protein_coding protein_coding MGP_129S1SvImJ_T0051651.1 MGP_129S1SvImJ_G0025088.1 mouse_genomes_project 19 37137191 37145284 - MGP_129S1SvImJ_P0051651 Rbp4 protein_coding protein_coding MGP_129S1SvImJ_T0010327.1 MGP_129S1SvImJ_G0008443.1 mouse_genomes_project 19 40140661 40140748 + Mir8092 miRNA miRNA MGP_129S1SvImJ_T0052293.1 MGP_129S1SvImJ_G0025300.1 mouse_genomes_project 19 61660233 61748556 - MGP_129S1SvImJ_P0052293 Zfp950 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052294.1 MGP_129S1SvImJ_G0025300.1 mouse_genomes_project 19 61721922 61748601 - MGP_129S1SvImJ_P0052294 Zfp950 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052295.1 MGP_129S1SvImJ_G0025300.1 mouse_genomes_project 19 61723479 61724314 - Zfp950 protein_coding retained_intron MGP_129S1SvImJ_T0052296.1 MGP_129S1SvImJ_G0025300.1 mouse_genomes_project 19 61724064 61748578 - MGP_129S1SvImJ_P0052296 Zfp950 protein_coding protein_coding MGP_129S1SvImJ_T0052297.1 MGP_129S1SvImJ_G0025300.1 mouse_genomes_project 19 61724083 61748580 - MGP_129S1SvImJ_P0052297 Zfp950 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052298.1 MGP_129S1SvImJ_G0025300.1 mouse_genomes_project 19 61724214 61748531 - MGP_129S1SvImJ_P0052298 Zfp950 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052299.1 MGP_129S1SvImJ_G0025300.1 mouse_genomes_project 19 61725072 61748523 - MGP_129S1SvImJ_P0052299 Zfp950 protein_coding protein_coding MGP_129S1SvImJ_T0052300.1 MGP_129S1SvImJ_G0025300.1 mouse_genomes_project 19 61726376 61726547 - MGP_129S1SvImJ_P0052300 Zfp950 protein_coding protein_coding MGP_129S1SvImJ_T0052301.1 MGP_129S1SvImJ_G0025300.1 mouse_genomes_project 19 61729005 61748551 - MGP_129S1SvImJ_P0052301 Zfp950 protein_coding protein_coding MGP_129S1SvImJ_T0052302.1 MGP_129S1SvImJ_G0025300.1 mouse_genomes_project 19 61735601 61736177 - MGP_129S1SvImJ_P0052302 Zfp950 protein_coding protein_coding MGP_129S1SvImJ_T0052134.1 MGP_129S1SvImJ_G0025251.1 mouse_genomes_project 19 54107769 54126244 - MGP_129S1SvImJ_P0052134 Bbip1 protein_coding protein_coding MGP_129S1SvImJ_T0051382.1 MGP_129S1SvImJ_G0024997.1 mouse_genomes_project 19 22937544 23122307 - MGP_129S1SvImJ_P0051382 Pgm5 protein_coding protein_coding MGP_129S1SvImJ_T0051383.1 MGP_129S1SvImJ_G0024997.1 mouse_genomes_project 19 22939079 23018938 - Pgm5 protein_coding processed_transcript MGP_129S1SvImJ_T0051384.1 MGP_129S1SvImJ_G0024997.1 mouse_genomes_project 19 23077334 23122139 - Pgm5 protein_coding retained_intron MGP_129S1SvImJ_T0051385.1 MGP_129S1SvImJ_G0024997.1 mouse_genomes_project 19 23077435 23122104 - Pgm5 protein_coding retained_intron MGP_129S1SvImJ_T0051577.1 MGP_129S1SvImJ_G0025061.1 mouse_genomes_project 19 33338995 33340968 + MGP_129S1SvImJ_P0051577 protein_coding protein_coding MGP_129S1SvImJ_T0050515.1 MGP_129S1SvImJ_G0024682.1 mouse_genomes_project 19 1843239 1858148 - MGP_129S1SvImJ_P0050515 Peli3 protein_coding protein_coding MGP_129S1SvImJ_T0050516.1 MGP_129S1SvImJ_G0024682.1 mouse_genomes_project 19 1844444 1858183 - MGP_129S1SvImJ_P0050516 Peli3 protein_coding protein_coding MGP_129S1SvImJ_T0050517.1 MGP_129S1SvImJ_G0024682.1 mouse_genomes_project 19 1849033 1852676 - Peli3 protein_coding retained_intron MGP_129S1SvImJ_T0050518.1 MGP_129S1SvImJ_G0024682.1 mouse_genomes_project 19 1849059 1858154 - Peli3 protein_coding processed_transcript MGP_129S1SvImJ_T0050519.1 MGP_129S1SvImJ_G0024682.1 mouse_genomes_project 19 1849063 1858129 - MGP_129S1SvImJ_P0050519 Peli3 protein_coding protein_coding MGP_129S1SvImJ_T0050520.1 MGP_129S1SvImJ_G0024682.1 mouse_genomes_project 19 1849070 1858123 - Peli3 protein_coding processed_transcript MGP_129S1SvImJ_T0050521.1 MGP_129S1SvImJ_G0024682.1 mouse_genomes_project 19 1856655 1858102 - Peli3 protein_coding retained_intron MGP_129S1SvImJ_T0051241.1 MGP_129S1SvImJ_G0024913.1 mouse_genomes_project 19 10248470 10285188 - MGP_129S1SvImJ_P0051241 Zfp91 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051243.1 MGP_129S1SvImJ_G0024913.1 mouse_genomes_project 19 10251830 10285188 - MGP_129S1SvImJ_P0051243 Zfp91 protein_coding protein_coding MGP_129S1SvImJ_T0051244.1 MGP_129S1SvImJ_G0024913.1 mouse_genomes_project 19 10256321 10278643 - Zfp91 protein_coding retained_intron MGP_129S1SvImJ_T0050552.1 MGP_129S1SvImJ_G0024700.1 mouse_genomes_project 19 2322111 2324115 - MGP_129S1SvImJ_P0050552 Banf1 protein_coding protein_coding MGP_129S1SvImJ_T0050553.1 MGP_129S1SvImJ_G0024700.1 mouse_genomes_project 19 2322111 2323817 - MGP_129S1SvImJ_P0050553 Banf1 protein_coding protein_coding MGP_129S1SvImJ_T0051761.1 MGP_129S1SvImJ_G0025127.1 mouse_genomes_project 19 41053625 41089717 - MGP_129S1SvImJ_P0051761 Arhgap19 protein_coding protein_coding MGP_129S1SvImJ_T0051762.1 MGP_129S1SvImJ_G0025127.1 mouse_genomes_project 19 41053628 41089754 - MGP_129S1SvImJ_P0051762 Arhgap19 protein_coding protein_coding MGP_129S1SvImJ_T0051763.1 MGP_129S1SvImJ_G0025127.1 mouse_genomes_project 19 41056837 41068387 - MGP_129S1SvImJ_P0051763 Arhgap19 protein_coding protein_coding MGP_129S1SvImJ_T0051764.1 MGP_129S1SvImJ_G0025127.1 mouse_genomes_project 19 41057031 41089717 - MGP_129S1SvImJ_P0051764 Arhgap19 protein_coding protein_coding MGP_129S1SvImJ_T0051698.1 MGP_129S1SvImJ_G0025108.1 mouse_genomes_project 19 39278445 39302726 + MGP_129S1SvImJ_P0051698 Cyp2c50 protein_coding protein_coding MGP_129S1SvImJ_T0051699.1 MGP_129S1SvImJ_G0025108.1 mouse_genomes_project 19 39278447 39302726 + MGP_129S1SvImJ_P0051699 Cyp2c50 protein_coding protein_coding MGP_129S1SvImJ_T0051700.1 MGP_129S1SvImJ_G0025108.1 mouse_genomes_project 19 39278591 39281096 + Cyp2c50 protein_coding retained_intron MGP_129S1SvImJ_T0051198.1 MGP_129S1SvImJ_G0024885.1 mouse_genomes_project 19 9160390 9164920 + MGP_129S1SvImJ_P0051198 Mrpl16 protein_coding protein_coding MGP_129S1SvImJ_T0003883.1 MGP_129S1SvImJ_G0003476.1 mouse_genomes_project 19 22644461 22658782 + Pip5k1bos antisense antisense MGP_129S1SvImJ_T0050718.1 MGP_129S1SvImJ_G0024750.1 mouse_genomes_project 19 3150033 3160210 - MGP_129S1SvImJ_P0050718 Snx15 protein_coding protein_coding MGP_129S1SvImJ_T0050719.1 MGP_129S1SvImJ_G0024750.1 mouse_genomes_project 19 3150486 3160053 - MGP_129S1SvImJ_P0050719 Snx15 protein_coding protein_coding MGP_129S1SvImJ_T0050720.1 MGP_129S1SvImJ_G0024750.1 mouse_genomes_project 19 3151266 3152277 - Snx15 protein_coding retained_intron MGP_129S1SvImJ_T0050721.1 MGP_129S1SvImJ_G0024750.1 mouse_genomes_project 19 3151266 3159713 - Snx15 protein_coding processed_transcript MGP_129S1SvImJ_T0050722.1 MGP_129S1SvImJ_G0024750.1 mouse_genomes_project 19 3152126 3152922 - Snx15 protein_coding processed_transcript MGP_129S1SvImJ_T0050723.1 MGP_129S1SvImJ_G0024750.1 mouse_genomes_project 19 3152539 3160039 - Snx15 protein_coding retained_intron MGP_129S1SvImJ_T0050724.1 MGP_129S1SvImJ_G0024750.1 mouse_genomes_project 19 3152561 3160071 - MGP_129S1SvImJ_P0050724 Snx15 protein_coding protein_coding MGP_129S1SvImJ_T0050513.1 MGP_129S1SvImJ_G0024680.1 mouse_genomes_project 19 1796336 1817637 - MGP_129S1SvImJ_P0050513 Bbs1 protein_coding protein_coding MGP_129S1SvImJ_T0050941.1 MGP_129S1SvImJ_G0024797.1 mouse_genomes_project 19 4824993 4863683 - MGP_129S1SvImJ_P0050941 Slc22a19 protein_coding protein_coding MGP_129S1SvImJ_T0050942.1 MGP_129S1SvImJ_G0024797.1 mouse_genomes_project 19 4830919 4863652 - Slc22a19 protein_coding retained_intron MGP_129S1SvImJ_T0050943.1 MGP_129S1SvImJ_G0024797.1 mouse_genomes_project 19 4859048 4863683 - Slc22a19 protein_coding retained_intron MGP_129S1SvImJ_T0051558.1 MGP_129S1SvImJ_G0025052.1 mouse_genomes_project 19 32836406 32857407 + MGP_129S1SvImJ_P0051558 Lipm protein_coding protein_coding MGP_129S1SvImJ_T0003887.1 MGP_129S1SvImJ_G0003479.1 mouse_genomes_project 19 37825097 37828974 - Gm28991 antisense antisense MGP_129S1SvImJ_T0051504.1 MGP_129S1SvImJ_G0025031.1 mouse_genomes_project 19 28521259 28549475 + Uhrf2 protein_coding retained_intron MGP_129S1SvImJ_T0051505.1 MGP_129S1SvImJ_G0025031.1 mouse_genomes_project 19 28521259 28574174 + Uhrf2 protein_coding retained_intron MGP_129S1SvImJ_T0051506.1 MGP_129S1SvImJ_G0025031.1 mouse_genomes_project 19 28521259 28586314 + MGP_129S1SvImJ_P0051506 Uhrf2 protein_coding protein_coding MGP_129S1SvImJ_T0051507.1 MGP_129S1SvImJ_G0025031.1 mouse_genomes_project 19 28521335 28547826 + MGP_129S1SvImJ_P0051507 Uhrf2 protein_coding protein_coding MGP_129S1SvImJ_T0051508.1 MGP_129S1SvImJ_G0025031.1 mouse_genomes_project 19 28565400 28568103 + Uhrf2 protein_coding retained_intron MGP_129S1SvImJ_T0051509.1 MGP_129S1SvImJ_G0025031.1 mouse_genomes_project 19 28571158 28572900 + Uhrf2 protein_coding retained_intron MGP_129S1SvImJ_T0051510.1 MGP_129S1SvImJ_G0025031.1 mouse_genomes_project 19 28578293 28579916 + Uhrf2 protein_coding retained_intron MGP_129S1SvImJ_T0051511.1 MGP_129S1SvImJ_G0025031.1 mouse_genomes_project 19 28581655 28586314 + Uhrf2 protein_coding retained_intron MGP_129S1SvImJ_T0051512.1 MGP_129S1SvImJ_G0025031.1 mouse_genomes_project 19 28584550 28585529 + Uhrf2 protein_coding retained_intron MGP_129S1SvImJ_T0010303.1 MGP_129S1SvImJ_G0008419.1 mouse_genomes_project 19 3633949 3634075 + Gm26460 miRNA miRNA MGP_129S1SvImJ_T0007071.1 MGP_129S1SvImJ_G0005810.1 mouse_genomes_project 19 3036521 3042328 + Gm10814 lincRNA lincRNA MGP_129S1SvImJ_T0098719.1 MGP_129S1SvImJ_G0036804.1 mouse_genomes_project 19 2828283 2828339 - Gm27702 sRNA sRNA MGP_129S1SvImJ_T0052196.1 MGP_129S1SvImJ_G0025267.1 mouse_genomes_project 19 57094103 57096591 + MGP_129S1SvImJ_P0052196 Adrb1 protein_coding protein_coding MGP_129S1SvImJ_T0052179.1 MGP_129S1SvImJ_G0025262.1 mouse_genomes_project 19 56659023 56735060 - MGP_129S1SvImJ_P0052179 Nrap protein_coding protein_coding MGP_129S1SvImJ_T0052180.1 MGP_129S1SvImJ_G0025262.1 mouse_genomes_project 19 56659029 56735086 - MGP_129S1SvImJ_P0052180 Nrap protein_coding protein_coding MGP_129S1SvImJ_T0052181.1 MGP_129S1SvImJ_G0025262.1 mouse_genomes_project 19 56659089 56735084 - MGP_129S1SvImJ_P0052181 Nrap protein_coding protein_coding MGP_129S1SvImJ_T0052182.1 MGP_129S1SvImJ_G0025262.1 mouse_genomes_project 19 56659174 56723070 - MGP_129S1SvImJ_P0052182 Nrap protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052183.1 MGP_129S1SvImJ_G0025262.1 mouse_genomes_project 19 56659177 56734926 - MGP_129S1SvImJ_P0052183 Nrap protein_coding protein_coding MGP_129S1SvImJ_T0052184.1 MGP_129S1SvImJ_G0025262.1 mouse_genomes_project 19 56659177 56734926 - MGP_129S1SvImJ_P0052184 Nrap protein_coding protein_coding MGP_129S1SvImJ_T0007098.1 MGP_129S1SvImJ_G0005830.1 mouse_genomes_project 19 37065104 37068086 - I830134H01Rik lincRNA lincRNA MGP_129S1SvImJ_T0007099.1 MGP_129S1SvImJ_G0005830.1 mouse_genomes_project 19 37065214 37068086 - I830134H01Rik lincRNA lincRNA MGP_129S1SvImJ_T0013401.1 MGP_129S1SvImJ_G0011490.1 mouse_genomes_project 19 27434803 27435192 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0007073.1 MGP_129S1SvImJ_G0005812.1 mouse_genomes_project 19 7723056 7725668 - Gm26859 lincRNA lincRNA MGP_129S1SvImJ_T0050631.1 MGP_129S1SvImJ_G0024726.1 mouse_genomes_project 19 2713934 2717560 - MGP_129S1SvImJ_P0050631 Sssca1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050632.1 MGP_129S1SvImJ_G0024726.1 mouse_genomes_project 19 2716149 2717568 - MGP_129S1SvImJ_P0050632 Sssca1 protein_coding protein_coding MGP_129S1SvImJ_T0050633.1 MGP_129S1SvImJ_G0024726.1 mouse_genomes_project 19 2716153 2717507 - Sssca1 protein_coding retained_intron MGP_129S1SvImJ_T0050634.1 MGP_129S1SvImJ_G0024726.1 mouse_genomes_project 19 2716153 2717579 - MGP_129S1SvImJ_P0050634 Sssca1 protein_coding protein_coding MGP_129S1SvImJ_T0050635.1 MGP_129S1SvImJ_G0024726.1 mouse_genomes_project 19 2716257 2717322 - MGP_129S1SvImJ_P0050635 Sssca1 protein_coding protein_coding MGP_129S1SvImJ_T0050636.1 MGP_129S1SvImJ_G0024726.1 mouse_genomes_project 19 2716738 2717546 - Sssca1 protein_coding retained_intron MGP_129S1SvImJ_T0001040.1 MGP_129S1SvImJ_G0000969.1 mouse_genomes_project 19 2803555 2804008 + TEC TEC MGP_129S1SvImJ_T0010321.1 MGP_129S1SvImJ_G0008437.1 mouse_genomes_project 19 33140804 33140913 - Gm23060 miRNA miRNA MGP_129S1SvImJ_T0099630.1 MGP_129S1SvImJ_G0037697.1 mouse_genomes_project 19 10818923 10819030 - Gm22443 snRNA snRNA MGP_129S1SvImJ_T0052197.1 MGP_129S1SvImJ_G0025268.1 mouse_genomes_project 19 57165448 57202152 - MGP_129S1SvImJ_P0052197 Ccdc186 protein_coding protein_coding MGP_129S1SvImJ_T0052198.1 MGP_129S1SvImJ_G0025268.1 mouse_genomes_project 19 57168498 57174039 - MGP_129S1SvImJ_P0052198 Ccdc186 protein_coding protein_coding MGP_129S1SvImJ_T0052199.1 MGP_129S1SvImJ_G0025268.1 mouse_genomes_project 19 57168930 57193645 - MGP_129S1SvImJ_P0052199 Ccdc186 protein_coding protein_coding MGP_129S1SvImJ_T0052200.1 MGP_129S1SvImJ_G0025268.1 mouse_genomes_project 19 57170929 57177470 - Ccdc186 protein_coding retained_intron MGP_129S1SvImJ_T0052201.1 MGP_129S1SvImJ_G0025268.1 mouse_genomes_project 19 57177310 57180948 - Ccdc186 protein_coding retained_intron MGP_129S1SvImJ_T0052202.1 MGP_129S1SvImJ_G0025268.1 mouse_genomes_project 19 57180000 57202152 - Ccdc186 protein_coding retained_intron MGP_129S1SvImJ_T0051113.1 MGP_129S1SvImJ_G0024857.1 mouse_genomes_project 19 8160786 8203851 - MGP_129S1SvImJ_P0051113 Cd6 protein_coding protein_coding MGP_129S1SvImJ_T0051114.1 MGP_129S1SvImJ_G0024857.1 mouse_genomes_project 19 8160791 8170190 - Cd6 protein_coding retained_intron MGP_129S1SvImJ_T0051115.1 MGP_129S1SvImJ_G0024857.1 mouse_genomes_project 19 8160794 8203757 - MGP_129S1SvImJ_P0051115 Cd6 protein_coding protein_coding MGP_129S1SvImJ_T0051116.1 MGP_129S1SvImJ_G0024857.1 mouse_genomes_project 19 8162431 8164434 - Cd6 protein_coding retained_intron MGP_129S1SvImJ_T0051117.1 MGP_129S1SvImJ_G0024857.1 mouse_genomes_project 19 8166009 8203649 - MGP_129S1SvImJ_P0051117 Cd6 protein_coding protein_coding MGP_129S1SvImJ_T0051665.1 MGP_129S1SvImJ_G0025092.1 mouse_genomes_project 19 37444045 37454881 + MGP_129S1SvImJ_P0051665 Slc35g1 protein_coding protein_coding MGP_129S1SvImJ_T0051210.1 MGP_129S1SvImJ_G0024895.1 mouse_genomes_project 19 9539054 9539992 - MGP_129S1SvImJ_P0051210 Olfr1427 protein_coding protein_coding MGP_129S1SvImJ_T0052251.1 MGP_129S1SvImJ_G0025278.1 mouse_genomes_project 19 59158150 59171051 + MGP_129S1SvImJ_P0052251 Pnlip protein_coding protein_coding MGP_129S1SvImJ_T0050935.1 MGP_129S1SvImJ_G0024795.1 mouse_genomes_project 19 4747988 4758549 - MGP_129S1SvImJ_P0050935 Lgals12 protein_coding protein_coding MGP_129S1SvImJ_T0050936.1 MGP_129S1SvImJ_G0024795.1 mouse_genomes_project 19 4747989 4758534 - MGP_129S1SvImJ_P0050936 Lgals12 protein_coding protein_coding MGP_129S1SvImJ_T0050937.1 MGP_129S1SvImJ_G0024795.1 mouse_genomes_project 19 4748042 4758459 - MGP_129S1SvImJ_P0050937 Lgals12 protein_coding protein_coding MGP_129S1SvImJ_T0051617.1 MGP_129S1SvImJ_G0025076.1 mouse_genomes_project 19 35842688 35940566 + MGP_129S1SvImJ_P0051617 Btaf1 protein_coding protein_coding MGP_129S1SvImJ_T0052124.1 MGP_129S1SvImJ_G0025248.1 mouse_genomes_project 19 53753389 53803577 + MGP_129S1SvImJ_P0052124 Smc3 protein_coding protein_coding MGP_129S1SvImJ_T0052125.1 MGP_129S1SvImJ_G0025248.1 mouse_genomes_project 19 53793196 53794225 + Smc3 protein_coding retained_intron MGP_129S1SvImJ_T0052126.1 MGP_129S1SvImJ_G0025248.1 mouse_genomes_project 19 53801099 53802552 + Smc3 protein_coding retained_intron MGP_129S1SvImJ_T0051164.1 MGP_129S1SvImJ_G0024873.1 mouse_genomes_project 19 8628795 8645254 - MGP_129S1SvImJ_P0051164 Ms4a1 protein_coding protein_coding MGP_129S1SvImJ_T0051165.1 MGP_129S1SvImJ_G0024873.1 mouse_genomes_project 19 8629997 8633805 - Ms4a1 protein_coding retained_intron MGP_129S1SvImJ_T0051166.1 MGP_129S1SvImJ_G0024873.1 mouse_genomes_project 19 8633110 8645158 - Ms4a1 protein_coding retained_intron MGP_129S1SvImJ_T0050467.1 MGP_129S1SvImJ_G0024664.1 mouse_genomes_project 19 1317872 1352293 - MGP_129S1SvImJ_P0050467 Syt12 protein_coding protein_coding MGP_129S1SvImJ_T0050468.1 MGP_129S1SvImJ_G0024664.1 mouse_genomes_project 19 1319681 1324114 - Syt12 protein_coding processed_transcript MGP_129S1SvImJ_T0050469.1 MGP_129S1SvImJ_G0024664.1 mouse_genomes_project 19 1328741 1351976 - MGP_129S1SvImJ_P0050469 Syt12 protein_coding protein_coding MGP_129S1SvImJ_T0050470.1 MGP_129S1SvImJ_G0024664.1 mouse_genomes_project 19 1339393 1352006 - Syt12 protein_coding retained_intron MGP_129S1SvImJ_T0013387.1 MGP_129S1SvImJ_G0011476.1 mouse_genomes_project 19 13643507 13644063 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0017745.1 MGP_129S1SvImJ_G0015386.1 mouse_genomes_project 19 26376392 26377889 + Gm20407 processed_transcript processed_transcript MGP_129S1SvImJ_T0010314.1 MGP_129S1SvImJ_G0008430.1 mouse_genomes_project 19 15752459 15752552 - Gm23063 miRNA miRNA MGP_129S1SvImJ_T0051946.1 MGP_129S1SvImJ_G0025191.1 mouse_genomes_project 19 45357780 45363867 - MGP_129S1SvImJ_P0051946 Fgf8 protein_coding protein_coding MGP_129S1SvImJ_T0051947.1 MGP_129S1SvImJ_G0025191.1 mouse_genomes_project 19 45357795 45363908 - MGP_129S1SvImJ_P0051947 Fgf8 protein_coding protein_coding MGP_129S1SvImJ_T0051948.1 MGP_129S1SvImJ_G0025191.1 mouse_genomes_project 19 45357800 45363866 - MGP_129S1SvImJ_P0051948 Fgf8 protein_coding protein_coding MGP_129S1SvImJ_T0051949.1 MGP_129S1SvImJ_G0025191.1 mouse_genomes_project 19 45357918 45363851 - MGP_129S1SvImJ_P0051949 Fgf8 protein_coding protein_coding MGP_129S1SvImJ_T0051950.1 MGP_129S1SvImJ_G0025191.1 mouse_genomes_project 19 45357953 45363667 - MGP_129S1SvImJ_P0051950 Fgf8 protein_coding protein_coding MGP_129S1SvImJ_T0051951.1 MGP_129S1SvImJ_G0025191.1 mouse_genomes_project 19 45357972 45363667 - MGP_129S1SvImJ_P0051951 Fgf8 protein_coding protein_coding MGP_129S1SvImJ_T0010322.1 MGP_129S1SvImJ_G0008438.1 mouse_genomes_project 19 33517383 33517487 + Gm27476 miRNA miRNA MGP_129S1SvImJ_T0013391.1 MGP_129S1SvImJ_G0011480.1 mouse_genomes_project 19 18575511 18576195 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0051071.1 MGP_129S1SvImJ_G0024837.1 mouse_genomes_project 19 7373213 7410374 - MGP_129S1SvImJ_P0051071 Fads2 protein_coding protein_coding MGP_129S1SvImJ_T0010335.1 MGP_129S1SvImJ_G0008451.1 mouse_genomes_project 19 47071197 47071268 - Mir6995 miRNA miRNA MGP_129S1SvImJ_T0051187.1 MGP_129S1SvImJ_G0024880.1 mouse_genomes_project 19 9021434 9032744 - MGP_129S1SvImJ_P0051187 Ms4a3 protein_coding protein_coding MGP_129S1SvImJ_T0051188.1 MGP_129S1SvImJ_G0024880.1 mouse_genomes_project 19 9021437 9032773 - MGP_129S1SvImJ_P0051188 Ms4a3 protein_coding protein_coding MGP_129S1SvImJ_T0051189.1 MGP_129S1SvImJ_G0024880.1 mouse_genomes_project 19 9023840 9032790 - Ms4a3 protein_coding retained_intron MGP_129S1SvImJ_T0100900.1 MGP_129S1SvImJ_G0038967.1 mouse_genomes_project 19 23440919 23441051 - Gm24252 snoRNA snoRNA MGP_129S1SvImJ_T0011493.1 MGP_129S1SvImJ_G0009609.1 mouse_genomes_project 19 2848257 2848367 - Gm27505 misc_RNA misc_RNA MGP_129S1SvImJ_T0050596.1 MGP_129S1SvImJ_G0024712.1 mouse_genomes_project 19 2459652 2463197 + MGP_129S1SvImJ_P0050596 Cfl1 protein_coding protein_coding MGP_129S1SvImJ_T0051562.1 MGP_129S1SvImJ_G0025054.1 mouse_genomes_project 19 32924003 32975163 + MGP_129S1SvImJ_P0051562 Stambpl1 protein_coding protein_coding MGP_129S1SvImJ_T0051563.1 MGP_129S1SvImJ_G0025054.1 mouse_genomes_project 19 32924596 32966272 + MGP_129S1SvImJ_P0051563 Stambpl1 protein_coding protein_coding MGP_129S1SvImJ_T0051564.1 MGP_129S1SvImJ_G0025054.1 mouse_genomes_project 19 32952267 32970692 + Stambpl1 protein_coding retained_intron MGP_129S1SvImJ_T0051565.1 MGP_129S1SvImJ_G0025054.1 mouse_genomes_project 19 32952457 32975161 + MGP_129S1SvImJ_P0051565 Stambpl1 protein_coding protein_coding MGP_129S1SvImJ_T0051566.1 MGP_129S1SvImJ_G0025054.1 mouse_genomes_project 19 32967535 32969129 + Stambpl1 protein_coding processed_transcript MGP_129S1SvImJ_T0013390.1 MGP_129S1SvImJ_G0011479.1 mouse_genomes_project 19 16451413 16454437 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0051271.1 MGP_129S1SvImJ_G0024941.1 mouse_genomes_project 19 11040680 11042232 + MGP_129S1SvImJ_P0051271 protein_coding protein_coding MGP_129S1SvImJ_T0051398.1 MGP_129S1SvImJ_G0025005.1 mouse_genomes_project 19 24929118 25122998 + MGP_129S1SvImJ_P0051398 Smarca2 protein_coding protein_coding MGP_129S1SvImJ_T0051399.1 MGP_129S1SvImJ_G0025005.1 mouse_genomes_project 19 24929122 25122952 + MGP_129S1SvImJ_P0051399 Smarca2 protein_coding protein_coding MGP_129S1SvImJ_T0051400.1 MGP_129S1SvImJ_G0025005.1 mouse_genomes_project 19 24931272 25122950 + MGP_129S1SvImJ_P0051400 Smarca2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051401.1 MGP_129S1SvImJ_G0025005.1 mouse_genomes_project 19 24945651 25122059 + MGP_129S1SvImJ_P0051401 Smarca2 protein_coding protein_coding MGP_129S1SvImJ_T0051402.1 MGP_129S1SvImJ_G0025005.1 mouse_genomes_project 19 24949369 24956986 + MGP_129S1SvImJ_P0051402 Smarca2 protein_coding protein_coding MGP_129S1SvImJ_T0051403.1 MGP_129S1SvImJ_G0025005.1 mouse_genomes_project 19 25000115 25008552 + Smarca2 protein_coding retained_intron MGP_129S1SvImJ_T0051404.1 MGP_129S1SvImJ_G0025005.1 mouse_genomes_project 19 25010997 25096696 + Smarca2 protein_coding processed_transcript MGP_129S1SvImJ_T0051405.1 MGP_129S1SvImJ_G0025005.1 mouse_genomes_project 19 25056665 25116450 + Smarca2 protein_coding retained_intron MGP_129S1SvImJ_T0051406.1 MGP_129S1SvImJ_G0025005.1 mouse_genomes_project 19 25062486 25096736 + Smarca2 protein_coding processed_transcript MGP_129S1SvImJ_T0051407.1 MGP_129S1SvImJ_G0025005.1 mouse_genomes_project 19 25089514 25122165 + MGP_129S1SvImJ_P0051407 Smarca2 protein_coding protein_coding MGP_129S1SvImJ_T0051408.1 MGP_129S1SvImJ_G0025005.1 mouse_genomes_project 19 25089669 25122059 + MGP_129S1SvImJ_P0051408 Smarca2 protein_coding protein_coding MGP_129S1SvImJ_T0051409.1 MGP_129S1SvImJ_G0025005.1 mouse_genomes_project 19 25089704 25120931 + MGP_129S1SvImJ_P0051409 Smarca2 protein_coding protein_coding MGP_129S1SvImJ_T0051410.1 MGP_129S1SvImJ_G0025005.1 mouse_genomes_project 19 25089705 25122059 + MGP_129S1SvImJ_P0051410 Smarca2 protein_coding protein_coding MGP_129S1SvImJ_T0051411.1 MGP_129S1SvImJ_G0025005.1 mouse_genomes_project 19 25089705 25122950 + MGP_129S1SvImJ_P0051411 Smarca2 protein_coding protein_coding MGP_129S1SvImJ_T0051412.1 MGP_129S1SvImJ_G0025005.1 mouse_genomes_project 19 25094496 25118995 + MGP_129S1SvImJ_P0051412 Smarca2 protein_coding protein_coding MGP_129S1SvImJ_T0051413.1 MGP_129S1SvImJ_G0025005.1 mouse_genomes_project 19 25095709 25115692 + MGP_129S1SvImJ_P0051413 Smarca2 protein_coding protein_coding MGP_129S1SvImJ_T0051414.1 MGP_129S1SvImJ_G0025005.1 mouse_genomes_project 19 25096708 25122998 + MGP_129S1SvImJ_P0051414 Smarca2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051415.1 MGP_129S1SvImJ_G0025005.1 mouse_genomes_project 19 25098369 25122328 + MGP_129S1SvImJ_P0051415 Smarca2 protein_coding protein_coding MGP_129S1SvImJ_T0051416.1 MGP_129S1SvImJ_G0025005.1 mouse_genomes_project 19 25115183 25122121 + MGP_129S1SvImJ_P0051416 Smarca2 protein_coding protein_coding MGP_129S1SvImJ_T0051835.1 MGP_129S1SvImJ_G0025150.1 mouse_genomes_project 19 42146985 42767972 - MGP_129S1SvImJ_P0051835 Hpse2 protein_coding protein_coding MGP_129S1SvImJ_T0050884.1 MGP_129S1SvImJ_G0024780.1 mouse_genomes_project 19 4094068 4096982 + MGP_129S1SvImJ_P0050884 Trpt1 protein_coding protein_coding MGP_129S1SvImJ_T0051548.1 MGP_129S1SvImJ_G0025046.1 mouse_genomes_project 19 32172536 32256101 - MGP_129S1SvImJ_P0051548 Lipo5 protein_coding protein_coding MGP_129S1SvImJ_T0050504.1 MGP_129S1SvImJ_G0024677.1 mouse_genomes_project 19 1756444 1762228 + MGP_129S1SvImJ_P0050504 Ctsf protein_coding protein_coding MGP_129S1SvImJ_T0050550.1 MGP_129S1SvImJ_G0024698.1 mouse_genomes_project 19 2291993 2300406 + MGP_129S1SvImJ_P0050550 Catsper1 protein_coding protein_coding MGP_129S1SvImJ_T0003862.1 MGP_129S1SvImJ_G0003465.1 mouse_genomes_project 19 2373325 2381584 + 4930481A15Rik antisense antisense MGP_129S1SvImJ_T0003863.1 MGP_129S1SvImJ_G0003465.1 mouse_genomes_project 19 2373343 2384152 + 4930481A15Rik antisense antisense MGP_129S1SvImJ_T0003864.1 MGP_129S1SvImJ_G0003465.1 mouse_genomes_project 19 2373396 2384255 + 4930481A15Rik antisense antisense MGP_129S1SvImJ_T0003865.1 MGP_129S1SvImJ_G0003465.1 mouse_genomes_project 19 2373403 2384159 + 4930481A15Rik antisense antisense MGP_129S1SvImJ_T0003866.1 MGP_129S1SvImJ_G0003465.1 mouse_genomes_project 19 2373455 2389767 + 4930481A15Rik antisense antisense MGP_129S1SvImJ_T0050523.1 MGP_129S1SvImJ_G0024684.1 mouse_genomes_project 19 1905643 1911260 - MGP_129S1SvImJ_P0050523 Npas4 protein_coding protein_coding MGP_129S1SvImJ_T0051195.1 MGP_129S1SvImJ_G0024883.1 mouse_genomes_project 19 9083327 9097700 + MGP_129S1SvImJ_P0051195 Oosp3 protein_coding protein_coding MGP_129S1SvImJ_T0051196.1 MGP_129S1SvImJ_G0024883.1 mouse_genomes_project 19 9083350 9097716 + MGP_129S1SvImJ_P0051196 Oosp3 protein_coding protein_coding MGP_129S1SvImJ_T0051573.1 MGP_129S1SvImJ_G0025059.1 mouse_genomes_project 19 33287224 33315168 + MGP_129S1SvImJ_P0051573 Ifit2 protein_coding protein_coding MGP_129S1SvImJ_T0051574.1 MGP_129S1SvImJ_G0025059.1 mouse_genomes_project 19 33287240 33318395 + MGP_129S1SvImJ_P0051574 Ifit2 protein_coding protein_coding MGP_129S1SvImJ_T0010330.1 MGP_129S1SvImJ_G0008446.1 mouse_genomes_project 19 41613643 41613732 - Mir3085 miRNA miRNA MGP_129S1SvImJ_T0051428.1 MGP_129S1SvImJ_G0025010.1 mouse_genomes_project 19 26139596 26209224 - Rfx3 protein_coding processed_transcript MGP_129S1SvImJ_T0051429.1 MGP_129S1SvImJ_G0025010.1 mouse_genomes_project 19 26139911 26305390 - MGP_129S1SvImJ_P0051429 Rfx3 protein_coding protein_coding MGP_129S1SvImJ_T0051430.1 MGP_129S1SvImJ_G0025010.1 mouse_genomes_project 19 26139911 26279921 - MGP_129S1SvImJ_P0051430 Rfx3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051431.1 MGP_129S1SvImJ_G0025010.1 mouse_genomes_project 19 26177479 26394937 - Rfx3 protein_coding retained_intron MGP_129S1SvImJ_T0051432.1 MGP_129S1SvImJ_G0025010.1 mouse_genomes_project 19 26245023 26394561 - MGP_129S1SvImJ_P0051432 Rfx3 protein_coding protein_coding MGP_129S1SvImJ_T0052083.1 MGP_129S1SvImJ_G0025234.1 mouse_genomes_project 19 47572702 47691766 - MGP_129S1SvImJ_P0052083 Cfap43 protein_coding protein_coding MGP_129S1SvImJ_T0052084.1 MGP_129S1SvImJ_G0025234.1 mouse_genomes_project 19 47572747 47600536 - Cfap43 protein_coding processed_transcript MGP_129S1SvImJ_T0052085.1 MGP_129S1SvImJ_G0025234.1 mouse_genomes_project 19 47572747 47600536 - Cfap43 protein_coding processed_transcript MGP_129S1SvImJ_T0052086.1 MGP_129S1SvImJ_G0025234.1 mouse_genomes_project 19 47587908 47600544 - Cfap43 protein_coding processed_transcript MGP_129S1SvImJ_T0052087.1 MGP_129S1SvImJ_G0025234.1 mouse_genomes_project 19 47627154 47782769 - Cfap43 protein_coding retained_intron MGP_129S1SvImJ_T0052088.1 MGP_129S1SvImJ_G0025234.1 mouse_genomes_project 19 47638484 47657824 - Cfap43 protein_coding processed_transcript MGP_129S1SvImJ_T0052089.1 MGP_129S1SvImJ_G0025234.1 mouse_genomes_project 19 47670499 47691745 - Cfap43 protein_coding retained_intron MGP_129S1SvImJ_T0052096.1 MGP_129S1SvImJ_G0025234.1 mouse_genomes_project 19 47757082 47782781 - MGP_129S1SvImJ_P0052096 Cfap43 protein_coding protein_coding MGP_129S1SvImJ_T0050628.1 MGP_129S1SvImJ_G0024725.1 mouse_genomes_project 19 2713933 2715500 - MGP_129S1SvImJ_P0050628 Fam89b protein_coding protein_coding MGP_129S1SvImJ_T0050629.1 MGP_129S1SvImJ_G0024725.1 mouse_genomes_project 19 2713933 2715480 - MGP_129S1SvImJ_P0050629 Fam89b protein_coding protein_coding MGP_129S1SvImJ_T0050630.1 MGP_129S1SvImJ_G0024725.1 mouse_genomes_project 19 2713933 2715498 - MGP_129S1SvImJ_P0050630 Fam89b protein_coding protein_coding MGP_129S1SvImJ_T0051197.1 MGP_129S1SvImJ_G0024884.1 mouse_genomes_project 19 9133447 9151957 + MGP_129S1SvImJ_P0051197 Gif protein_coding protein_coding MGP_129S1SvImJ_T0050554.1 MGP_129S1SvImJ_G0024701.1 mouse_genomes_project 19 2324282 2328981 + MGP_129S1SvImJ_P0050554 Eif1ad protein_coding protein_coding MGP_129S1SvImJ_T0051693.1 MGP_129S1SvImJ_G0025104.1 mouse_genomes_project 19 38717076 38769303 - MGP_129S1SvImJ_P0051693 protein_coding protein_coding MGP_129S1SvImJ_T0051433.1 MGP_129S1SvImJ_G0025011.1 mouse_genomes_project 19 26661063 27097052 - MGP_129S1SvImJ_P0051433 Glis3 protein_coding protein_coding MGP_129S1SvImJ_T0051434.1 MGP_129S1SvImJ_G0025011.1 mouse_genomes_project 19 26664566 26731206 - Glis3 protein_coding processed_transcript MGP_129S1SvImJ_T0051435.1 MGP_129S1SvImJ_G0025011.1 mouse_genomes_project 19 26664583 27096641 - MGP_129S1SvImJ_P0051435 Glis3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051436.1 MGP_129S1SvImJ_G0025011.1 mouse_genomes_project 19 26664645 26704350 - Glis3 protein_coding processed_transcript MGP_129S1SvImJ_T0051437.1 MGP_129S1SvImJ_G0025011.1 mouse_genomes_project 19 26665192 26952366 - Glis3 protein_coding retained_intron MGP_129S1SvImJ_T0051438.1 MGP_129S1SvImJ_G0025011.1 mouse_genomes_project 19 26666170 26686113 - Glis3 protein_coding retained_intron MGP_129S1SvImJ_T0051439.1 MGP_129S1SvImJ_G0025011.1 mouse_genomes_project 19 26755066 27097052 - MGP_129S1SvImJ_P0051439 Glis3 protein_coding protein_coding MGP_129S1SvImJ_T0051440.1 MGP_129S1SvImJ_G0025011.1 mouse_genomes_project 19 26943792 27095665 - MGP_129S1SvImJ_P0051440 Glis3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051441.1 MGP_129S1SvImJ_G0025011.1 mouse_genomes_project 19 26943792 27083656 - MGP_129S1SvImJ_P0051441 Glis3 protein_coding protein_coding MGP_129S1SvImJ_T0051442.1 MGP_129S1SvImJ_G0025011.1 mouse_genomes_project 19 26943792 27095665 - MGP_129S1SvImJ_P0051442 Glis3 protein_coding protein_coding MGP_129S1SvImJ_T0007072.1 MGP_129S1SvImJ_G0005811.1 mouse_genomes_project 19 3726792 3728278 + Gm14968 lincRNA lincRNA MGP_129S1SvImJ_T0050725.1 MGP_129S1SvImJ_G0024751.1 mouse_genomes_project 19 3166056 3172820 - Arl2 protein_coding retained_intron MGP_129S1SvImJ_T0050726.1 MGP_129S1SvImJ_G0024751.1 mouse_genomes_project 19 3166065 3173086 - MGP_129S1SvImJ_P0050726 Arl2 protein_coding protein_coding MGP_129S1SvImJ_T0050727.1 MGP_129S1SvImJ_G0024751.1 mouse_genomes_project 19 3169152 3169843 - Arl2 protein_coding retained_intron MGP_129S1SvImJ_T0051094.1 MGP_129S1SvImJ_G0024844.1 mouse_genomes_project 19 7792749 7794815 - MGP_129S1SvImJ_P0051094 Lrrc10b protein_coding protein_coding MGP_129S1SvImJ_T0051313.1 MGP_129S1SvImJ_G0024966.1 mouse_genomes_project 19 16449285 16506008 - MGP_129S1SvImJ_P0051313 Ostf1 protein_coding protein_coding MGP_129S1SvImJ_T0051314.1 MGP_129S1SvImJ_G0024966.1 mouse_genomes_project 19 16450950 16505960 - Ostf1 protein_coding retained_intron MGP_129S1SvImJ_T0051315.1 MGP_129S1SvImJ_G0024966.1 mouse_genomes_project 19 16465826 16505938 - Ostf1 protein_coding retained_intron MGP_129S1SvImJ_T0050555.1 MGP_129S1SvImJ_G0024702.1 mouse_genomes_project 19 2334992 2348007 - MGP_129S1SvImJ_P0050555 Sart1 protein_coding protein_coding MGP_129S1SvImJ_T0051261.1 MGP_129S1SvImJ_G0024931.1 mouse_genomes_project 19 10753456 10754389 + MGP_129S1SvImJ_P0051261 Olfr1463 protein_coding protein_coding MGP_129S1SvImJ_T0050899.1 MGP_129S1SvImJ_G0024789.1 mouse_genomes_project 19 4398005 4467540 - MGP_129S1SvImJ_P0050899 Mark2 protein_coding protein_coding MGP_129S1SvImJ_T0050900.1 MGP_129S1SvImJ_G0024789.1 mouse_genomes_project 19 4398008 4469484 - MGP_129S1SvImJ_P0050900 Mark2 protein_coding protein_coding MGP_129S1SvImJ_T0050901.1 MGP_129S1SvImJ_G0024789.1 mouse_genomes_project 19 4399345 4469464 - MGP_129S1SvImJ_P0050901 Mark2 protein_coding protein_coding MGP_129S1SvImJ_T0050902.1 MGP_129S1SvImJ_G0024789.1 mouse_genomes_project 19 4399371 4467344 - MGP_129S1SvImJ_P0050902 Mark2 protein_coding protein_coding MGP_129S1SvImJ_T0050903.1 MGP_129S1SvImJ_G0024789.1 mouse_genomes_project 19 4399461 4405663 - MGP_129S1SvImJ_P0050903 Mark2 protein_coding protein_coding MGP_129S1SvImJ_T0050904.1 MGP_129S1SvImJ_G0024789.1 mouse_genomes_project 19 4399461 4469469 - MGP_129S1SvImJ_P0050904 Mark2 protein_coding protein_coding MGP_129S1SvImJ_T0050905.1 MGP_129S1SvImJ_G0024789.1 mouse_genomes_project 19 4399464 4400707 - Mark2 protein_coding retained_intron MGP_129S1SvImJ_T0050906.1 MGP_129S1SvImJ_G0024789.1 mouse_genomes_project 19 4399702 4467373 - MGP_129S1SvImJ_P0050906 Mark2 protein_coding protein_coding MGP_129S1SvImJ_T0050907.1 MGP_129S1SvImJ_G0024789.1 mouse_genomes_project 19 4399892 4405678 - MGP_129S1SvImJ_P0050907 Mark2 protein_coding protein_coding MGP_129S1SvImJ_T0050908.1 MGP_129S1SvImJ_G0024789.1 mouse_genomes_project 19 4400057 4405791 - MGP_129S1SvImJ_P0050908 Mark2 protein_coding protein_coding MGP_129S1SvImJ_T0050909.1 MGP_129S1SvImJ_G0024789.1 mouse_genomes_project 19 4401114 4406130 - MGP_129S1SvImJ_P0050909 Mark2 protein_coding protein_coding MGP_129S1SvImJ_T0050910.1 MGP_129S1SvImJ_G0024789.1 mouse_genomes_project 19 4401772 4404554 - MGP_129S1SvImJ_P0050910 Mark2 protein_coding protein_coding MGP_129S1SvImJ_T0050911.1 MGP_129S1SvImJ_G0024789.1 mouse_genomes_project 19 4403649 4405723 - MGP_129S1SvImJ_P0050911 Mark2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050912.1 MGP_129S1SvImJ_G0024789.1 mouse_genomes_project 19 4405749 4407391 - Mark2 protein_coding retained_intron MGP_129S1SvImJ_T0050913.1 MGP_129S1SvImJ_G0024789.1 mouse_genomes_project 19 4407369 4410164 - Mark2 protein_coding retained_intron MGP_129S1SvImJ_T0050914.1 MGP_129S1SvImJ_G0024789.1 mouse_genomes_project 19 4408620 4469525 - MGP_129S1SvImJ_P0050914 Mark2 protein_coding protein_coding MGP_129S1SvImJ_T0050915.1 MGP_129S1SvImJ_G0024789.1 mouse_genomes_project 19 4410137 4469269 - MGP_129S1SvImJ_P0050915 Mark2 protein_coding protein_coding MGP_129S1SvImJ_T0050916.1 MGP_129S1SvImJ_G0024789.1 mouse_genomes_project 19 4413126 4469307 - MGP_129S1SvImJ_P0050916 Mark2 protein_coding protein_coding MGP_129S1SvImJ_T0050917.1 MGP_129S1SvImJ_G0024789.1 mouse_genomes_project 19 4413455 4469477 - MGP_129S1SvImJ_P0050917 Mark2 protein_coding protein_coding MGP_129S1SvImJ_T0017756.1 MGP_129S1SvImJ_G0015389.1 mouse_genomes_project 19 45944603 45947737 - Gm16726 processed_transcript processed_transcript MGP_129S1SvImJ_T0051050.1 MGP_129S1SvImJ_G0024827.1 mouse_genomes_project 19 6255820 6266787 + MGP_129S1SvImJ_P0051050 Eef1g protein_coding protein_coding MGP_129S1SvImJ_T0051051.1 MGP_129S1SvImJ_G0024827.1 mouse_genomes_project 19 6256176 6261123 + Eef1g protein_coding processed_transcript MGP_129S1SvImJ_T0051052.1 MGP_129S1SvImJ_G0024827.1 mouse_genomes_project 19 6256822 6261243 + Eef1g protein_coding processed_transcript MGP_129S1SvImJ_T0051053.1 MGP_129S1SvImJ_G0024827.1 mouse_genomes_project 19 6256822 6258808 + Eef1g protein_coding retained_intron MGP_129S1SvImJ_T0051054.1 MGP_129S1SvImJ_G0024827.1 mouse_genomes_project 19 6256822 6258113 + Eef1g protein_coding retained_intron MGP_129S1SvImJ_T0051055.1 MGP_129S1SvImJ_G0024827.1 mouse_genomes_project 19 6261010 6267079 + Eef1g protein_coding retained_intron MGP_129S1SvImJ_T0051266.1 MGP_129S1SvImJ_G0024936.1 mouse_genomes_project 19 10960270 10961174 + MGP_129S1SvImJ_P0051266 Olfr1471 protein_coding protein_coding MGP_129S1SvImJ_T0050425.1 MGP_129S1SvImJ_G0024654.1 mouse_genomes_project 19 1026982 1033672 - MGP_129S1SvImJ_P0050425 Tbc1d10c protein_coding protein_coding MGP_129S1SvImJ_T0050525.1 MGP_129S1SvImJ_G0024686.1 mouse_genomes_project 19 1965020 1967329 + MGP_129S1SvImJ_P0050525 B4gat1 protein_coding protein_coding MGP_129S1SvImJ_T0051214.1 MGP_129S1SvImJ_G0024899.1 mouse_genomes_project 19 9737239 9738164 + MGP_129S1SvImJ_P0051214 protein_coding protein_coding MGP_129S1SvImJ_T0051547.1 MGP_129S1SvImJ_G0025045.1 mouse_genomes_project 19 32172536 32498550 - MGP_129S1SvImJ_P0051547 Lipo3 protein_coding protein_coding MGP_129S1SvImJ_T0051550.1 MGP_129S1SvImJ_G0025045.1 mouse_genomes_project 19 32213076 32470565 - Lipo3 protein_coding retained_intron MGP_129S1SvImJ_T0051552.1 MGP_129S1SvImJ_G0025045.1 mouse_genomes_project 19 32324538 32498460 - Lipo3 protein_coding processed_transcript MGP_129S1SvImJ_T0052207.1 MGP_129S1SvImJ_G0025270.1 mouse_genomes_project 19 57254882 57293971 + MGP_129S1SvImJ_P0052207 Vwa2 protein_coding protein_coding MGP_129S1SvImJ_T0051674.1 MGP_129S1SvImJ_G0025094.1 mouse_genomes_project 19 37864518 37907642 - MGP_129S1SvImJ_P0051674 Noc3l protein_coding protein_coding MGP_129S1SvImJ_T0010336.1 MGP_129S1SvImJ_G0008452.1 mouse_genomes_project 19 47590869 47591005 - Mir8090 miRNA miRNA MGP_129S1SvImJ_T0051182.1 MGP_129S1SvImJ_G0024879.1 mouse_genomes_project 19 9006214 9014355 - MGP_129S1SvImJ_P0051182 Ms4a2 protein_coding protein_coding MGP_129S1SvImJ_T0051183.1 MGP_129S1SvImJ_G0024879.1 mouse_genomes_project 19 9007648 9014390 - MGP_129S1SvImJ_P0051183 Ms4a2 protein_coding protein_coding MGP_129S1SvImJ_T0051184.1 MGP_129S1SvImJ_G0024879.1 mouse_genomes_project 19 9007884 9014314 - MGP_129S1SvImJ_P0051184 Ms4a2 protein_coding protein_coding MGP_129S1SvImJ_T0051185.1 MGP_129S1SvImJ_G0024879.1 mouse_genomes_project 19 9008164 9014330 - MGP_129S1SvImJ_P0051185 Ms4a2 protein_coding protein_coding MGP_129S1SvImJ_T0051186.1 MGP_129S1SvImJ_G0024879.1 mouse_genomes_project 19 9009620 9014359 - Ms4a2 protein_coding processed_transcript MGP_129S1SvImJ_T0007108.1 MGP_129S1SvImJ_G0005838.1 mouse_genomes_project 19 44916673 44925601 - Gm28578 lincRNA lincRNA MGP_129S1SvImJ_T0007109.1 MGP_129S1SvImJ_G0005838.1 mouse_genomes_project 19 44916693 44917439 - Gm28578 lincRNA lincRNA MGP_129S1SvImJ_T0007110.1 MGP_129S1SvImJ_G0005838.1 mouse_genomes_project 19 44922538 44925587 - Gm28578 lincRNA lincRNA MGP_129S1SvImJ_T0050752.1 MGP_129S1SvImJ_G0024759.1 mouse_genomes_project 19 3384281 3390183 + MGP_129S1SvImJ_P0050752 Men1 protein_coding protein_coding MGP_129S1SvImJ_T0050753.1 MGP_129S1SvImJ_G0024759.1 mouse_genomes_project 19 3384281 3390194 + MGP_129S1SvImJ_P0050753 Men1 protein_coding protein_coding MGP_129S1SvImJ_T0050754.1 MGP_129S1SvImJ_G0024759.1 mouse_genomes_project 19 3384315 3390192 + MGP_129S1SvImJ_P0050754 Men1 protein_coding protein_coding MGP_129S1SvImJ_T0050755.1 MGP_129S1SvImJ_G0024759.1 mouse_genomes_project 19 3384341 3390192 + MGP_129S1SvImJ_P0050755 Men1 protein_coding protein_coding MGP_129S1SvImJ_T0050756.1 MGP_129S1SvImJ_G0024759.1 mouse_genomes_project 19 3384341 3390192 + MGP_129S1SvImJ_P0050756 Men1 protein_coding protein_coding MGP_129S1SvImJ_T0050757.1 MGP_129S1SvImJ_G0024759.1 mouse_genomes_project 19 3384348 3390194 + Men1 protein_coding retained_intron MGP_129S1SvImJ_T0050758.1 MGP_129S1SvImJ_G0024759.1 mouse_genomes_project 19 3384349 3390086 + MGP_129S1SvImJ_P0050758 Men1 protein_coding protein_coding MGP_129S1SvImJ_T0050759.1 MGP_129S1SvImJ_G0024759.1 mouse_genomes_project 19 3384366 3389766 + MGP_129S1SvImJ_P0050759 Men1 protein_coding protein_coding MGP_129S1SvImJ_T0050760.1 MGP_129S1SvImJ_G0024759.1 mouse_genomes_project 19 3384413 3390192 + MGP_129S1SvImJ_P0050760 Men1 protein_coding protein_coding MGP_129S1SvImJ_T0050761.1 MGP_129S1SvImJ_G0024759.1 mouse_genomes_project 19 3384763 3389475 + MGP_129S1SvImJ_P0050761 Men1 protein_coding protein_coding MGP_129S1SvImJ_T0050762.1 MGP_129S1SvImJ_G0024759.1 mouse_genomes_project 19 3386212 3387711 + MGP_129S1SvImJ_P0050762 Men1 protein_coding protein_coding MGP_129S1SvImJ_T0050763.1 MGP_129S1SvImJ_G0024759.1 mouse_genomes_project 19 3389149 3390115 + MGP_129S1SvImJ_P0050763 Men1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0013403.1 MGP_129S1SvImJ_G0011492.1 mouse_genomes_project 19 31119480 31148717 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0051427.1 MGP_129S1SvImJ_G0025009.1 mouse_genomes_project 19 25755862 25792464 - MGP_129S1SvImJ_P0051427 Pum3 protein_coding protein_coding MGP_129S1SvImJ_T0051336.1 MGP_129S1SvImJ_G0024973.1 mouse_genomes_project 19 18597634 18644400 + MGP_129S1SvImJ_P0051336 Aldh1a1 protein_coding protein_coding MGP_129S1SvImJ_T0051551.1 MGP_129S1SvImJ_G0025048.1 mouse_genomes_project 19 32298979 32332299 - MGP_129S1SvImJ_P0051551 Lipo2 protein_coding protein_coding MGP_129S1SvImJ_T0051772.1 MGP_129S1SvImJ_G0025133.1 mouse_genomes_project 19 41244995 41286866 - MGP_129S1SvImJ_P0051772 Mms19 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051773.1 MGP_129S1SvImJ_G0025133.1 mouse_genomes_project 19 41244995 41286909 - MGP_129S1SvImJ_P0051773 Mms19 protein_coding protein_coding MGP_129S1SvImJ_T0051774.1 MGP_129S1SvImJ_G0025133.1 mouse_genomes_project 19 41248136 41268560 - Mms19 protein_coding retained_intron MGP_129S1SvImJ_T0051775.1 MGP_129S1SvImJ_G0025133.1 mouse_genomes_project 19 41248140 41275478 - MGP_129S1SvImJ_P0051775 Mms19 protein_coding protein_coding MGP_129S1SvImJ_T0051776.1 MGP_129S1SvImJ_G0025133.1 mouse_genomes_project 19 41248142 41286888 - MGP_129S1SvImJ_P0051776 Mms19 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051777.1 MGP_129S1SvImJ_G0025133.1 mouse_genomes_project 19 41248142 41286869 - MGP_129S1SvImJ_P0051777 Mms19 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051778.1 MGP_129S1SvImJ_G0025133.1 mouse_genomes_project 19 41248308 41286884 - MGP_129S1SvImJ_P0051778 Mms19 protein_coding protein_coding MGP_129S1SvImJ_T0051779.1 MGP_129S1SvImJ_G0025133.1 mouse_genomes_project 19 41248420 41259065 - MGP_129S1SvImJ_P0051779 Mms19 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051780.1 MGP_129S1SvImJ_G0025133.1 mouse_genomes_project 19 41248480 41249559 - Mms19 protein_coding retained_intron MGP_129S1SvImJ_T0051781.1 MGP_129S1SvImJ_G0025133.1 mouse_genomes_project 19 41250739 41286891 - Mms19 protein_coding retained_intron MGP_129S1SvImJ_T0051782.1 MGP_129S1SvImJ_G0025133.1 mouse_genomes_project 19 41250927 41257872 - MGP_129S1SvImJ_P0051782 Mms19 protein_coding protein_coding MGP_129S1SvImJ_T0051783.1 MGP_129S1SvImJ_G0025133.1 mouse_genomes_project 19 41251112 41252180 - Mms19 protein_coding retained_intron MGP_129S1SvImJ_T0051784.1 MGP_129S1SvImJ_G0025133.1 mouse_genomes_project 19 41251622 41286889 - MGP_129S1SvImJ_P0051784 Mms19 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051785.1 MGP_129S1SvImJ_G0025133.1 mouse_genomes_project 19 41253644 41255262 - Mms19 protein_coding retained_intron MGP_129S1SvImJ_T0051786.1 MGP_129S1SvImJ_G0025133.1 mouse_genomes_project 19 41257024 41286882 - MGP_129S1SvImJ_P0051786 Mms19 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051787.1 MGP_129S1SvImJ_G0025133.1 mouse_genomes_project 19 41258383 41259094 - Mms19 protein_coding retained_intron MGP_129S1SvImJ_T0051788.1 MGP_129S1SvImJ_G0025133.1 mouse_genomes_project 19 41266721 41267049 - Mms19 protein_coding retained_intron MGP_129S1SvImJ_T0051789.1 MGP_129S1SvImJ_G0025133.1 mouse_genomes_project 19 41266929 41275497 - MGP_129S1SvImJ_P0051789 Mms19 protein_coding protein_coding MGP_129S1SvImJ_T0003888.1 MGP_129S1SvImJ_G0003480.1 mouse_genomes_project 19 41872437 41898520 - Gm16541 antisense antisense MGP_129S1SvImJ_T0003889.1 MGP_129S1SvImJ_G0003480.1 mouse_genomes_project 19 41872443 41898507 - Gm16541 antisense antisense MGP_129S1SvImJ_T0003890.1 MGP_129S1SvImJ_G0003480.1 mouse_genomes_project 19 41897918 41898520 - Gm16541 antisense antisense MGP_129S1SvImJ_T0007081.1 MGP_129S1SvImJ_G0005819.1 mouse_genomes_project 19 21260791 21261609 + 2410080I02Rik lincRNA lincRNA MGP_129S1SvImJ_T0013385.1 MGP_129S1SvImJ_G0011474.1 mouse_genomes_project 19 10041546 10042138 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011492.1 MGP_129S1SvImJ_G0009608.1 mouse_genomes_project 19 2847905 2848057 - Gm27533 misc_RNA misc_RNA MGP_129S1SvImJ_T0010323.1 MGP_129S1SvImJ_G0008439.1 mouse_genomes_project 19 33596312 33596399 - Mir107 miRNA miRNA MGP_129S1SvImJ_T0013395.1 MGP_129S1SvImJ_G0011484.1 mouse_genomes_project 19 24101922 24102839 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0098348.1 MGP_129S1SvImJ_G0036433.1 mouse_genomes_project 19 61575447 61576030 - pseudogene pseudogene MGP_129S1SvImJ_T0051754.1 MGP_129S1SvImJ_G0025124.1 mouse_genomes_project 19 40857023 40861190 + MGP_129S1SvImJ_P0051754 Gm340 protein_coding protein_coding MGP_129S1SvImJ_T0050599.1 MGP_129S1SvImJ_G0024715.1 mouse_genomes_project 19 2522604 2534043 - MGP_129S1SvImJ_P0050599 Ovol1 protein_coding protein_coding MGP_129S1SvImJ_T0050931.1 MGP_129S1SvImJ_G0024794.1 mouse_genomes_project 19 4704738 4737845 + MGP_129S1SvImJ_P0050931 Pla2g16 protein_coding protein_coding MGP_129S1SvImJ_T0050932.1 MGP_129S1SvImJ_G0024794.1 mouse_genomes_project 19 4704738 4731028 + MGP_129S1SvImJ_P0050932 Pla2g16 protein_coding protein_coding MGP_129S1SvImJ_T0050933.1 MGP_129S1SvImJ_G0024794.1 mouse_genomes_project 19 4704756 4727094 + MGP_129S1SvImJ_P0050933 Pla2g16 protein_coding protein_coding MGP_129S1SvImJ_T0050934.1 MGP_129S1SvImJ_G0024794.1 mouse_genomes_project 19 4704764 4736011 + MGP_129S1SvImJ_P0050934 Pla2g16 protein_coding protein_coding MGP_129S1SvImJ_T0051546.1 MGP_129S1SvImJ_G0025044.1 mouse_genomes_project 19 31826524 32088797 - MGP_129S1SvImJ_P0051546 Rnls protein_coding protein_coding MGP_129S1SvImJ_T0051571.1 MGP_129S1SvImJ_G0025058.1 mouse_genomes_project 19 33227406 33264103 - MGP_129S1SvImJ_P0051571 Lipa protein_coding protein_coding MGP_129S1SvImJ_T0051572.1 MGP_129S1SvImJ_G0025058.1 mouse_genomes_project 19 33227406 33264103 - MGP_129S1SvImJ_P0051572 Lipa protein_coding protein_coding MGP_129S1SvImJ_T0099628.1 MGP_129S1SvImJ_G0037695.1 mouse_genomes_project 19 4366668 4366772 + Gm22113 snRNA snRNA MGP_129S1SvImJ_T0050895.1 MGP_129S1SvImJ_G0024787.1 mouse_genomes_project 19 4345312 4361182 - MGP_129S1SvImJ_P0050895 Naa40 protein_coding protein_coding MGP_129S1SvImJ_T0052172.1 MGP_129S1SvImJ_G0025261.1 mouse_genomes_project 19 56621417 56659078 + MGP_129S1SvImJ_P0052172 Habp2 protein_coding protein_coding MGP_129S1SvImJ_T0052173.1 MGP_129S1SvImJ_G0025261.1 mouse_genomes_project 19 56622204 56659805 + MGP_129S1SvImJ_P0052173 Habp2 protein_coding protein_coding MGP_129S1SvImJ_T0052174.1 MGP_129S1SvImJ_G0025261.1 mouse_genomes_project 19 56622218 56651009 + Habp2 protein_coding processed_transcript MGP_129S1SvImJ_T0052175.1 MGP_129S1SvImJ_G0025261.1 mouse_genomes_project 19 56622278 56655286 + MGP_129S1SvImJ_P0052175 Habp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052176.1 MGP_129S1SvImJ_G0025261.1 mouse_genomes_project 19 56622278 56658625 + MGP_129S1SvImJ_P0052176 Habp2 protein_coding protein_coding MGP_129S1SvImJ_T0052177.1 MGP_129S1SvImJ_G0025261.1 mouse_genomes_project 19 56650834 56655408 + MGP_129S1SvImJ_P0052177 Habp2 protein_coding protein_coding MGP_129S1SvImJ_T0052178.1 MGP_129S1SvImJ_G0025261.1 mouse_genomes_project 19 56651961 56658619 + MGP_129S1SvImJ_P0052178 Habp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050738.1 MGP_129S1SvImJ_G0024755.1 mouse_genomes_project 19 3271311 3279419 - MGP_129S1SvImJ_P0050738 Ppp2r5b protein_coding protein_coding MGP_129S1SvImJ_T0050739.1 MGP_129S1SvImJ_G0024755.1 mouse_genomes_project 19 3272831 3274026 - Ppp2r5b protein_coding retained_intron MGP_129S1SvImJ_T0050740.1 MGP_129S1SvImJ_G0024755.1 mouse_genomes_project 19 3277483 3279390 - Ppp2r5b protein_coding processed_transcript MGP_129S1SvImJ_T0017733.1 MGP_129S1SvImJ_G0015381.1 mouse_genomes_project 19 7521881 7525898 + Gm10143 processed_transcript processed_transcript MGP_129S1SvImJ_T0017734.1 MGP_129S1SvImJ_G0015381.1 mouse_genomes_project 19 7522702 7525896 + Gm10143 processed_transcript processed_transcript MGP_129S1SvImJ_T0013380.1 MGP_129S1SvImJ_G0011469.1 mouse_genomes_project 19 6873294 6874630 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0050402.1 MGP_129S1SvImJ_G0024648.1 mouse_genomes_project 19 970534 977177 - MGP_129S1SvImJ_P0050402 Cabp4 protein_coding protein_coding MGP_129S1SvImJ_T0050950.1 MGP_129S1SvImJ_G0024802.1 mouse_genomes_project 19 5929083 5943590 + MGP_129S1SvImJ_P0050950 Chrm1 protein_coding protein_coding MGP_129S1SvImJ_T0050951.1 MGP_129S1SvImJ_G0024802.1 mouse_genomes_project 19 5929301 5949023 + MGP_129S1SvImJ_P0050951 Chrm1 protein_coding protein_coding MGP_129S1SvImJ_T0050952.1 MGP_129S1SvImJ_G0024802.1 mouse_genomes_project 19 5929301 5947003 + MGP_129S1SvImJ_P0050952 Chrm1 protein_coding protein_coding MGP_129S1SvImJ_T0052093.1 MGP_129S1SvImJ_G0025236.1 mouse_genomes_project 19 47727867 47748815 + MGP_129S1SvImJ_P0052093 Gsto2 protein_coding protein_coding MGP_129S1SvImJ_T0052094.1 MGP_129S1SvImJ_G0025236.1 mouse_genomes_project 19 47728089 47748815 + MGP_129S1SvImJ_P0052094 Gsto2 protein_coding protein_coding MGP_129S1SvImJ_T0052095.1 MGP_129S1SvImJ_G0025236.1 mouse_genomes_project 19 47732572 47747202 + MGP_129S1SvImJ_P0052095 Gsto2 protein_coding protein_coding MGP_129S1SvImJ_T0050657.1 MGP_129S1SvImJ_G0024733.1 mouse_genomes_project 19 2928179 2936067 - MGP_129S1SvImJ_P0050657 Cdc42ep2 protein_coding protein_coding MGP_129S1SvImJ_T0050875.1 MGP_129S1SvImJ_G0024776.1 mouse_genomes_project 19 4071616 4074337 - MGP_129S1SvImJ_P0050875 Fkbp2 protein_coding protein_coding MGP_129S1SvImJ_T0050876.1 MGP_129S1SvImJ_G0024776.1 mouse_genomes_project 19 4071616 4074316 - MGP_129S1SvImJ_P0050876 Fkbp2 protein_coding protein_coding MGP_129S1SvImJ_T0051337.1 MGP_129S1SvImJ_G0024974.1 mouse_genomes_project 19 18693752 18729631 - MGP_129S1SvImJ_P0051337 Aldh1a7 protein_coding protein_coding MGP_129S1SvImJ_T0051803.1 MGP_129S1SvImJ_G0025142.1 mouse_genomes_project 19 41489215 41502984 + Zfyve27 protein_coding retained_intron MGP_129S1SvImJ_T0051804.1 MGP_129S1SvImJ_G0025142.1 mouse_genomes_project 19 41495830 41522477 + MGP_129S1SvImJ_P0051804 Zfyve27 protein_coding protein_coding MGP_129S1SvImJ_T0051805.1 MGP_129S1SvImJ_G0025142.1 mouse_genomes_project 19 41495857 41516975 + MGP_129S1SvImJ_P0051805 Zfyve27 protein_coding protein_coding MGP_129S1SvImJ_T0051806.1 MGP_129S1SvImJ_G0025142.1 mouse_genomes_project 19 41495963 41498470 + Zfyve27 protein_coding retained_intron MGP_129S1SvImJ_T0051807.1 MGP_129S1SvImJ_G0025142.1 mouse_genomes_project 19 41504078 41509415 + MGP_129S1SvImJ_P0051807 Zfyve27 protein_coding protein_coding MGP_129S1SvImJ_T0051808.1 MGP_129S1SvImJ_G0025142.1 mouse_genomes_project 19 41508740 41510084 + Zfyve27 protein_coding retained_intron MGP_129S1SvImJ_T0051809.1 MGP_129S1SvImJ_G0025142.1 mouse_genomes_project 19 41510590 41515772 + Zfyve27 protein_coding retained_intron MGP_129S1SvImJ_T0051810.1 MGP_129S1SvImJ_G0025142.1 mouse_genomes_project 19 41510864 41516152 + Zfyve27 protein_coding retained_intron MGP_129S1SvImJ_T0051278.1 MGP_129S1SvImJ_G0024948.1 mouse_genomes_project 19 11352054 11352999 - MGP_129S1SvImJ_P0051278 Olfr1497 protein_coding protein_coding MGP_129S1SvImJ_T0007097.1 MGP_129S1SvImJ_G0005829.1 mouse_genomes_project 19 36111955 36137598 + A330032B11Rik lincRNA lincRNA MGP_129S1SvImJ_T0100881.1 MGP_129S1SvImJ_G0038948.1 mouse_genomes_project 19 908342 908558 - Gm23927 snoRNA snoRNA MGP_129S1SvImJ_T0098555.1 MGP_129S1SvImJ_G0036640.1 mouse_genomes_project 19 48128755 48128866 - Gm23857 rRNA rRNA MGP_129S1SvImJ_T0013412.1 MGP_129S1SvImJ_G0011501.1 mouse_genomes_project 19 59278655 59279036 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0050881.1 MGP_129S1SvImJ_G0024779.1 mouse_genomes_project 19 4088413 4094055 - MGP_129S1SvImJ_P0050881 Nudt22 protein_coding protein_coding MGP_129S1SvImJ_T0050882.1 MGP_129S1SvImJ_G0024779.1 mouse_genomes_project 19 4088413 4093975 - MGP_129S1SvImJ_P0050882 Nudt22 protein_coding protein_coding MGP_129S1SvImJ_T0050883.1 MGP_129S1SvImJ_G0024779.1 mouse_genomes_project 19 4088414 4092828 - Nudt22 protein_coding retained_intron MGP_129S1SvImJ_T0051321.1 MGP_129S1SvImJ_G0024968.1 mouse_genomes_project 19 16550876 16586771 + MGP_129S1SvImJ_P0051321 Carnmt1 protein_coding protein_coding MGP_129S1SvImJ_T0013383.1 MGP_129S1SvImJ_G0011472.1 mouse_genomes_project 19 9090088 9090881 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010341.1 MGP_129S1SvImJ_G0008457.1 mouse_genomes_project 19 55455778 55455835 + Mir6715 miRNA miRNA MGP_129S1SvImJ_T0052240.1 MGP_129S1SvImJ_G0025275.1 mouse_genomes_project 19 58042686 58600842 + MGP_129S1SvImJ_P0052240 Atrnl1 protein_coding protein_coding MGP_129S1SvImJ_T0051966.1 MGP_129S1SvImJ_G0025196.1 mouse_genomes_project 19 45657179 45659875 + MGP_129S1SvImJ_P0051966 Hps6 protein_coding protein_coding MGP_129S1SvImJ_T0051715.1 MGP_129S1SvImJ_G0025112.1 mouse_genomes_project 19 39762424 39804576 - MGP_129S1SvImJ_P0051715 Aldh18a1 protein_coding protein_coding MGP_129S1SvImJ_T0051716.1 MGP_129S1SvImJ_G0025112.1 mouse_genomes_project 19 39762424 39804482 - MGP_129S1SvImJ_P0051716 Aldh18a1 protein_coding protein_coding MGP_129S1SvImJ_T0051717.1 MGP_129S1SvImJ_G0025112.1 mouse_genomes_project 19 39763318 39767033 - Aldh18a1 protein_coding retained_intron MGP_129S1SvImJ_T0051718.1 MGP_129S1SvImJ_G0025112.1 mouse_genomes_project 19 39765594 39766911 - MGP_129S1SvImJ_P0051718 Aldh18a1 protein_coding protein_coding MGP_129S1SvImJ_T0051719.1 MGP_129S1SvImJ_G0025112.1 mouse_genomes_project 19 39769240 39804536 - Aldh18a1 protein_coding retained_intron MGP_129S1SvImJ_T0051720.1 MGP_129S1SvImJ_G0025112.1 mouse_genomes_project 19 39789168 39804497 - MGP_129S1SvImJ_P0051720 Aldh18a1 protein_coding protein_coding MGP_129S1SvImJ_T0051721.1 MGP_129S1SvImJ_G0025112.1 mouse_genomes_project 19 39792439 39804523 - MGP_129S1SvImJ_P0051721 Aldh18a1 protein_coding protein_coding MGP_129S1SvImJ_T0051722.1 MGP_129S1SvImJ_G0025112.1 mouse_genomes_project 19 39792482 39804495 - MGP_129S1SvImJ_P0051722 Aldh18a1 protein_coding protein_coding MGP_129S1SvImJ_T0052195.1 MGP_129S1SvImJ_G0025266.1 mouse_genomes_project 19 56908199 56961670 + MGP_129S1SvImJ_P0052195 Nhlrc2 protein_coding protein_coding MGP_129S1SvImJ_T0050547.1 MGP_129S1SvImJ_G0024695.1 mouse_genomes_project 19 2068301 2224508 - MGP_129S1SvImJ_P0050547 Pacs1 protein_coding protein_coding MGP_129S1SvImJ_T0050505.1 MGP_129S1SvImJ_G0024678.1 mouse_genomes_project 19 1762538 1764874 - Actn3 protein_coding processed_transcript MGP_129S1SvImJ_T0050506.1 MGP_129S1SvImJ_G0024678.1 mouse_genomes_project 19 1762538 1785936 - MGP_129S1SvImJ_P0050506 Actn3 protein_coding protein_coding MGP_129S1SvImJ_T0051250.1 MGP_129S1SvImJ_G0024920.1 mouse_genomes_project 19 10422836 10423781 - MGP_129S1SvImJ_P0051250 Olfr1448 protein_coding protein_coding MGP_129S1SvImJ_T0051108.1 MGP_129S1SvImJ_G0024853.1 mouse_genomes_project 19 7985822 8021661 + MGP_129S1SvImJ_P0051108 Vwce protein_coding protein_coding MGP_129S1SvImJ_T0051616.1 MGP_129S1SvImJ_G0025075.1 mouse_genomes_project 19 35832598 35834663 - MGP_129S1SvImJ_P0051616 Fgfbp3 protein_coding protein_coding MGP_129S1SvImJ_T0051925.1 MGP_129S1SvImJ_G0025183.1 mouse_genomes_project 19 44592562 44602868 + MGP_129S1SvImJ_P0051925 Sfxn3 protein_coding protein_coding MGP_129S1SvImJ_T0051926.1 MGP_129S1SvImJ_G0025183.1 mouse_genomes_project 19 44592562 44602868 + MGP_129S1SvImJ_P0051926 Sfxn3 protein_coding protein_coding MGP_129S1SvImJ_T0051927.1 MGP_129S1SvImJ_G0025183.1 mouse_genomes_project 19 44592562 44602868 + MGP_129S1SvImJ_P0051927 Sfxn3 protein_coding protein_coding MGP_129S1SvImJ_T0051232.1 MGP_129S1SvImJ_G0024910.1 mouse_genomes_project 19 10155336 10156401 + MGP_129S1SvImJ_P0051232 Olfr1442 protein_coding protein_coding MGP_129S1SvImJ_T0052267.1 MGP_129S1SvImJ_G0025289.1 mouse_genomes_project 19 59982117 59989066 + MGP_129S1SvImJ_P0052267 Emx2 protein_coding protein_coding MGP_129S1SvImJ_T0052268.1 MGP_129S1SvImJ_G0025289.1 mouse_genomes_project 19 59983265 59989062 + MGP_129S1SvImJ_P0052268 Emx2 protein_coding protein_coding MGP_129S1SvImJ_T0052269.1 MGP_129S1SvImJ_G0025289.1 mouse_genomes_project 19 59986507 59987915 + Emx2 protein_coding processed_transcript MGP_129S1SvImJ_T0051461.1 MGP_129S1SvImJ_G0025017.1 mouse_genomes_project 19 27538870 27582118 + MGP_129S1SvImJ_P0051461 Rcl1 protein_coding protein_coding MGP_129S1SvImJ_T0052266.1 MGP_129S1SvImJ_G0025288.1 mouse_genomes_project 19 59808858 59862599 - MGP_129S1SvImJ_P0052266 Pdzd8 protein_coding protein_coding MGP_129S1SvImJ_T0051652.1 MGP_129S1SvImJ_G0025089.1 mouse_genomes_project 19 37153205 37206552 + MGP_129S1SvImJ_P0051652 Pde6c protein_coding protein_coding MGP_129S1SvImJ_T0051653.1 MGP_129S1SvImJ_G0025089.1 mouse_genomes_project 19 37153205 37206552 + MGP_129S1SvImJ_P0051653 Pde6c protein_coding protein_coding MGP_129S1SvImJ_T0051654.1 MGP_129S1SvImJ_G0025089.1 mouse_genomes_project 19 37153370 37206344 + MGP_129S1SvImJ_P0051654 Pde6c protein_coding unknown_likely_coding MGP_129S1SvImJ_T0003868.1 MGP_129S1SvImJ_G0003467.1 mouse_genomes_project 19 2849242 2856841 + Frmd8os antisense antisense MGP_129S1SvImJ_T0003869.1 MGP_129S1SvImJ_G0003467.1 mouse_genomes_project 19 2853960 2856825 + Frmd8os antisense antisense MGP_129S1SvImJ_T0050675.1 MGP_129S1SvImJ_G0024741.1 mouse_genomes_project 19 3090411 3091692 + MGP_129S1SvImJ_P0050675 Znhit2 protein_coding protein_coding MGP_129S1SvImJ_T0052241.1 MGP_129S1SvImJ_G0025276.1 mouse_genomes_project 19 58704599 58930314 - MGP_129S1SvImJ_P0052241 Gfra1 protein_coding protein_coding MGP_129S1SvImJ_T0052242.1 MGP_129S1SvImJ_G0025276.1 mouse_genomes_project 19 58704607 58929508 - MGP_129S1SvImJ_P0052242 Gfra1 protein_coding protein_coding MGP_129S1SvImJ_T0052243.1 MGP_129S1SvImJ_G0025276.1 mouse_genomes_project 19 58705687 58929382 - MGP_129S1SvImJ_P0052243 Gfra1 protein_coding protein_coding MGP_129S1SvImJ_T0052244.1 MGP_129S1SvImJ_G0025276.1 mouse_genomes_project 19 58707153 58930275 - MGP_129S1SvImJ_P0052244 Gfra1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052245.1 MGP_129S1SvImJ_G0025276.1 mouse_genomes_project 19 58707153 58930217 - MGP_129S1SvImJ_P0052245 Gfra1 protein_coding protein_coding MGP_129S1SvImJ_T0052246.1 MGP_129S1SvImJ_G0025276.1 mouse_genomes_project 19 58928251 58929922 - MGP_129S1SvImJ_P0052246 Gfra1 protein_coding protein_coding MGP_129S1SvImJ_T0052247.1 MGP_129S1SvImJ_G0025276.1 mouse_genomes_project 19 58928268 58930825 - MGP_129S1SvImJ_P0052247 Gfra1 protein_coding protein_coding MGP_129S1SvImJ_T0052248.1 MGP_129S1SvImJ_G0025276.1 mouse_genomes_project 19 58928337 58929536 - MGP_129S1SvImJ_P0052248 Gfra1 protein_coding protein_coding MGP_129S1SvImJ_T0052249.1 MGP_129S1SvImJ_G0025276.1 mouse_genomes_project 19 58929239 58930077 - MGP_129S1SvImJ_P0052249 Gfra1 protein_coding protein_coding MGP_129S1SvImJ_T0051798.1 MGP_129S1SvImJ_G0025139.1 mouse_genomes_project 19 41407063 41441106 + MGP_129S1SvImJ_P0051798 Pi4k2a protein_coding protein_coding MGP_129S1SvImJ_T0052270.1 MGP_129S1SvImJ_G0025290.1 mouse_genomes_project 19 60439717 60481327 - MGP_129S1SvImJ_P0052270 Rab11fip2 protein_coding protein_coding MGP_129S1SvImJ_T0052271.1 MGP_129S1SvImJ_G0025290.1 mouse_genomes_project 19 60440527 60481038 - MGP_129S1SvImJ_P0052271 Rab11fip2 protein_coding protein_coding MGP_129S1SvImJ_T0052272.1 MGP_129S1SvImJ_G0025290.1 mouse_genomes_project 19 60443747 60480674 - MGP_129S1SvImJ_P0052272 Rab11fip2 protein_coding protein_coding MGP_129S1SvImJ_T0050297.1 MGP_129S1SvImJ_G0024627.1 mouse_genomes_project 19 349116 464783 - MGP_129S1SvImJ_P0050297 Lrp5 protein_coding protein_coding MGP_129S1SvImJ_T0050298.1 MGP_129S1SvImJ_G0024627.1 mouse_genomes_project 19 349119 464788 - MGP_129S1SvImJ_P0050298 Lrp5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050299.1 MGP_129S1SvImJ_G0024627.1 mouse_genomes_project 19 349124 381820 - MGP_129S1SvImJ_P0050299 Lrp5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050300.1 MGP_129S1SvImJ_G0024627.1 mouse_genomes_project 19 387703 464791 - MGP_129S1SvImJ_P0050300 Lrp5 protein_coding protein_coding MGP_129S1SvImJ_T0051812.1 MGP_129S1SvImJ_G0025144.1 mouse_genomes_project 19 41575982 41600402 + MGP_129S1SvImJ_P0051812 Golga7b protein_coding protein_coding MGP_129S1SvImJ_T0051813.1 MGP_129S1SvImJ_G0025144.1 mouse_genomes_project 19 41584063 41600402 + MGP_129S1SvImJ_P0051813 Golga7b protein_coding protein_coding MGP_129S1SvImJ_T0051109.1 MGP_129S1SvImJ_G0024854.1 mouse_genomes_project 19 8025405 8042397 - MGP_129S1SvImJ_P0051109 Pga5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0051110.1 MGP_129S1SvImJ_G0024854.1 mouse_genomes_project 19 8025409 8035900 - MGP_129S1SvImJ_P0051110 Pga5 protein_coding protein_coding MGP_129S1SvImJ_T0051639.1 MGP_129S1SvImJ_G0025081.1 mouse_genomes_project 19 36408964 36415148 + MGP_129S1SvImJ_P0051639 Hhex protein_coding protein_coding MGP_129S1SvImJ_T0051955.1 MGP_129S1SvImJ_G0025194.1 mouse_genomes_project 19 45417941 45420396 - MGP_129S1SvImJ_P0051955 Kcnip2 protein_coding protein_coding MGP_129S1SvImJ_T0051956.1 MGP_129S1SvImJ_G0025194.1 mouse_genomes_project 19 45418442 45446799 - Kcnip2 protein_coding retained_intron MGP_129S1SvImJ_T0051957.1 MGP_129S1SvImJ_G0025194.1 mouse_genomes_project 19 45418442 45446838 - MGP_129S1SvImJ_P0051957 Kcnip2 protein_coding protein_coding MGP_129S1SvImJ_T0051958.1 MGP_129S1SvImJ_G0025194.1 mouse_genomes_project 19 45418442 45446799 - MGP_129S1SvImJ_P0051958 Kcnip2 protein_coding protein_coding MGP_129S1SvImJ_T0051959.1 MGP_129S1SvImJ_G0025194.1 mouse_genomes_project 19 45419445 45443069 - MGP_129S1SvImJ_P0051959 Kcnip2 protein_coding protein_coding MGP_129S1SvImJ_T0051960.1 MGP_129S1SvImJ_G0025194.1 mouse_genomes_project 19 45419544 45446802 - MGP_129S1SvImJ_P0051960 Kcnip2 protein_coding protein_coding MGP_129S1SvImJ_T0051961.1 MGP_129S1SvImJ_G0025194.1 mouse_genomes_project 19 45419766 45446610 - MGP_129S1SvImJ_P0051961 Kcnip2 protein_coding protein_coding MGP_129S1SvImJ_T0051962.1 MGP_129S1SvImJ_G0025194.1 mouse_genomes_project 19 45419766 45422396 - MGP_129S1SvImJ_P0051962 Kcnip2 protein_coding protein_coding MGP_129S1SvImJ_T0051963.1 MGP_129S1SvImJ_G0025194.1 mouse_genomes_project 19 45420087 45446580 - MGP_129S1SvImJ_P0051963 Kcnip2 protein_coding protein_coding MGP_129S1SvImJ_T0051964.1 MGP_129S1SvImJ_G0025194.1 mouse_genomes_project 19 45421742 45423736 - MGP_129S1SvImJ_P0051964 Kcnip2 protein_coding protein_coding MGP_129S1SvImJ_T0050524.1 MGP_129S1SvImJ_G0024685.1 mouse_genomes_project 19 1950196 1958156 + MGP_129S1SvImJ_P0050524 Slc29a2 protein_coding protein_coding MGP_129S1SvImJ_T0051245.1 MGP_129S1SvImJ_G0024915.1 mouse_genomes_project 19 10287667 10327680 + MGP_129S1SvImJ_P0051245 Lpxn protein_coding protein_coding MGP_129S1SvImJ_T0051246.1 MGP_129S1SvImJ_G0024916.1 mouse_genomes_project 19 10356097 10357127 + MGP_129S1SvImJ_P0051246 Olfr1444 protein_coding protein_coding MGP_129S1SvImJ_T0052037.1 MGP_129S1SvImJ_G0025214.1 mouse_genomes_project 19 46416224 46422034 - MGP_129S1SvImJ_P0052037 Cyp17a1 protein_coding protein_coding MGP_129S1SvImJ_T0052038.1 MGP_129S1SvImJ_G0025214.1 mouse_genomes_project 19 46417146 46418573 - Cyp17a1 protein_coding retained_intron MGP_129S1SvImJ_T0052039.1 MGP_129S1SvImJ_G0025214.1 mouse_genomes_project 19 46419785 46420351 - Cyp17a1 protein_coding retained_intron MGP_129S1SvImJ_T0050435.1 MGP_129S1SvImJ_G0024660.1 mouse_genomes_project 19 1119045 1135209 - MGP_129S1SvImJ_P0050435 Ankrd13d protein_coding protein_coding MGP_129S1SvImJ_T0050436.1 MGP_129S1SvImJ_G0024660.1 mouse_genomes_project 19 1119045 1136169 - MGP_129S1SvImJ_P0050436 Ankrd13d protein_coding protein_coding MGP_129S1SvImJ_T0050437.1 MGP_129S1SvImJ_G0024660.1 mouse_genomes_project 19 1119047 1136171 - MGP_129S1SvImJ_P0050437 Ankrd13d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050438.1 MGP_129S1SvImJ_G0024660.1 mouse_genomes_project 19 1119263 1120160 - MGP_129S1SvImJ_P0050438 Ankrd13d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050439.1 MGP_129S1SvImJ_G0024660.1 mouse_genomes_project 19 1121486 1134045 - MGP_129S1SvImJ_P0050439 Ankrd13d protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050440.1 MGP_129S1SvImJ_G0024660.1 mouse_genomes_project 19 1132499 1136171 - Ankrd13d protein_coding processed_transcript MGP_129S1SvImJ_T0050441.1 MGP_129S1SvImJ_G0024660.1 mouse_genomes_project 19 1133679 1136067 - MGP_129S1SvImJ_P0050441 Ankrd13d protein_coding protein_coding MGP_129S1SvImJ_T0051380.1 MGP_129S1SvImJ_G0024995.1 mouse_genomes_project 19 22705540 22706395 - MGP_129S1SvImJ_P0051380 Fam122a protein_coding protein_coding MGP_129S1SvImJ_T0099639.1 MGP_129S1SvImJ_G0037706.1 mouse_genomes_project 19 33569998 33570159 + Gm22082 snRNA snRNA MGP_129S1SvImJ_T0051750.1 MGP_129S1SvImJ_G0025121.1 mouse_genomes_project 19 40470293 40528384 - MGP_129S1SvImJ_P0051750 Tm9sf3 protein_coding protein_coding MGP_129S1SvImJ_T0100898.1 MGP_129S1SvImJ_G0038965.1 mouse_genomes_project 19 21811636 21811738 + Gm22144 snoRNA snoRNA MGP_129S1SvImJ_T0052238.1 MGP_129S1SvImJ_G0025274.1 mouse_genomes_project 19 57886173 57927334 + MGP_129S1SvImJ_P0052238 Trub1 protein_coding protein_coding MGP_129S1SvImJ_T0052239.1 MGP_129S1SvImJ_G0025274.1 mouse_genomes_project 19 57886173 57925197 + MGP_129S1SvImJ_P0052239 Trub1 protein_coding protein_coding MGP_129S1SvImJ_T0052057.1 MGP_129S1SvImJ_G0025227.1 mouse_genomes_project 19 46954413 46955079 - MGP_129S1SvImJ_P0052057 Gm6970 protein_coding protein_coding MGP_129S1SvImJ_T0102016.1 MGP_129S1SvImJ_G0039868.1 mouse_genomes_project 19 46030520 46032642 - unitary_pseudogene processed_transcript MGP_129S1SvImJ_T0102017.1 MGP_129S1SvImJ_G0039868.1 mouse_genomes_project 19 46031218 46032642 - unitary_pseudogene unitary_pseudogene MGP_129S1SvImJ_T0007106.1 MGP_129S1SvImJ_G0005836.1 mouse_genomes_project 19 44898211 44899159 - Gm29593 lincRNA lincRNA MGP_129S1SvImJ_T0051922.1 MGP_129S1SvImJ_G0025182.1 mouse_genomes_project 19 44571923 44575032 - Pdzd7 protein_coding processed_transcript MGP_129S1SvImJ_T0051923.1 MGP_129S1SvImJ_G0025182.1 mouse_genomes_project 19 44571924 44591601 - MGP_129S1SvImJ_P0051923 Pdzd7 protein_coding protein_coding MGP_129S1SvImJ_T0051924.1 MGP_129S1SvImJ_G0025182.1 mouse_genomes_project 19 44571924 44590759 - MGP_129S1SvImJ_P0051924 Pdzd7 protein_coding protein_coding MGP_129S1SvImJ_T0007111.1 MGP_129S1SvImJ_G0005839.1 mouse_genomes_project 19 45652096 45667115 + 4930505N22Rik lincRNA lincRNA MGP_129S1SvImJ_T0050514.1 MGP_129S1SvImJ_G0024681.1 mouse_genomes_project 19 1818238 1840876 - MGP_129S1SvImJ_P0050514 Dpp3 protein_coding protein_coding MGP_129S1SvImJ_T0051932.1 MGP_129S1SvImJ_G0025187.1 mouse_genomes_project 19 44952243 45138201 + MGP_129S1SvImJ_P0051932 Btrc protein_coding protein_coding MGP_129S1SvImJ_T0051933.1 MGP_129S1SvImJ_G0025187.1 mouse_genomes_project 19 44952243 45138201 + MGP_129S1SvImJ_P0051933 Btrc protein_coding protein_coding MGP_129S1SvImJ_T0051248.1 MGP_129S1SvImJ_G0024918.1 mouse_genomes_project 19 10388007 10389051 - MGP_129S1SvImJ_P0051248 Olfr1446 protein_coding protein_coding MGP_129S1SvImJ_T0050874.1 MGP_129S1SvImJ_G0024775.1 mouse_genomes_project 19 4046716 4063601 - MGP_129S1SvImJ_P0050874 Plcb3 protein_coding protein_coding MGP_129S1SvImJ_T0007124.1 MGP_129S1SvImJ_G0005849.1 mouse_genomes_project 19 60431831 60436672 - Gm17203 lincRNA lincRNA MGP_129S1SvImJ_T0051105.1 MGP_129S1SvImJ_G0024850.1 mouse_genomes_project 19 7925831 7938508 + MGP_129S1SvImJ_P0051105 Cyb561a3 protein_coding protein_coding MGP_129S1SvImJ_T0017714.1 MGP_129S1SvImJ_G0015379.1 mouse_genomes_project 19 3695783 3758963 - 2410152P15Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0051567.1 MGP_129S1SvImJ_G0025055.1 mouse_genomes_project 19 32975922 32990150 - MGP_129S1SvImJ_P0051567 Acta2 protein_coding protein_coding MGP_129S1SvImJ_T0051522.1 MGP_129S1SvImJ_G0025036.1 mouse_genomes_project 19 29652767 29656527 + MGP_129S1SvImJ_P0051522 Cstf2t protein_coding protein_coding MGP_129S1SvImJ_T0007083.1 MGP_129S1SvImJ_G0005821.1 mouse_genomes_project 19 23984594 23985700 - 2610016A17Rik lincRNA lincRNA MGP_129S1SvImJ_T0007084.1 MGP_129S1SvImJ_G0005821.1 mouse_genomes_project 19 23984632 23985683 - 2610016A17Rik lincRNA lincRNA MGP_129S1SvImJ_T0007085.1 MGP_129S1SvImJ_G0005821.1 mouse_genomes_project 19 23985025 23985714 - 2610016A17Rik lincRNA lincRNA MGP_129S1SvImJ_T0050862.1 MGP_129S1SvImJ_G0024771.1 mouse_genomes_project 19 4011950 4014905 - MGP_129S1SvImJ_P0050862 Tex40 protein_coding protein_coding MGP_129S1SvImJ_T0051280.1 MGP_129S1SvImJ_G0024950.1 mouse_genomes_project 19 11394111 11395136 - MGP_129S1SvImJ_P0051280 Olfr1500 protein_coding protein_coding MGP_129S1SvImJ_T0050503.1 MGP_129S1SvImJ_G0024676.1 mouse_genomes_project 19 1735968 1739131 + MGP_129S1SvImJ_P0050503 Ccdc87 protein_coding protein_coding MGP_129S1SvImJ_T0051205.1 MGP_129S1SvImJ_G0024890.1 mouse_genomes_project 19 9367419 9397668 + MGP_129S1SvImJ_P0051205 Osbp protein_coding protein_coding MGP_129S1SvImJ_T0051213.1 MGP_129S1SvImJ_G0024898.1 mouse_genomes_project 19 9693727 9694666 - MGP_129S1SvImJ_P0051213 Olfr262 protein_coding protein_coding MGP_129S1SvImJ_T0051374.1 MGP_129S1SvImJ_G0024993.1 mouse_genomes_project 19 22475433 22499502 - MGP_129S1SvImJ_P0051374 Fxn protein_coding protein_coding MGP_129S1SvImJ_T0051375.1 MGP_129S1SvImJ_G0024993.1 mouse_genomes_project 19 22475481 22499465 - MGP_129S1SvImJ_P0051375 Fxn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051376.1 MGP_129S1SvImJ_G0024993.1 mouse_genomes_project 19 22477143 22497078 - Fxn protein_coding retained_intron MGP_129S1SvImJ_T0098549.1 MGP_129S1SvImJ_G0036634.1 mouse_genomes_project 19 3176391 3176511 + n-R5s19 rRNA rRNA MGP_129S1SvImJ_T0051118.1 MGP_129S1SvImJ_G0024858.1 mouse_genomes_project 19 8213490 8218277 + Slc15a3 protein_coding processed_transcript MGP_129S1SvImJ_T0051119.1 MGP_129S1SvImJ_G0024858.1 mouse_genomes_project 19 8216307 8232813 + MGP_129S1SvImJ_P0051119 Slc15a3 protein_coding protein_coding MGP_129S1SvImJ_T0051120.1 MGP_129S1SvImJ_G0024858.1 mouse_genomes_project 19 8216313 8218401 + Slc15a3 protein_coding processed_transcript MGP_129S1SvImJ_T0051121.1 MGP_129S1SvImJ_G0024858.1 mouse_genomes_project 19 8217824 8234260 + Slc15a3 protein_coding retained_intron MGP_129S1SvImJ_T0052097.1 MGP_129S1SvImJ_G0025237.1 mouse_genomes_project 19 47805580 47917524 + MGP_129S1SvImJ_P0052097 Cfap58 protein_coding protein_coding MGP_129S1SvImJ_T0010325.1 MGP_129S1SvImJ_G0008441.1 mouse_genomes_project 19 34088003 34088073 - Gm23075 miRNA miRNA MGP_129S1SvImJ_T0051285.1 MGP_129S1SvImJ_G0024955.1 mouse_genomes_project 19 12077031 12236664 - MGP_129S1SvImJ_P0051285 Tle4 protein_coding protein_coding MGP_129S1SvImJ_T0051286.1 MGP_129S1SvImJ_G0024955.1 mouse_genomes_project 19 12077109 12236732 - MGP_129S1SvImJ_P0051286 Tle4 protein_coding protein_coding MGP_129S1SvImJ_T0010333.1 MGP_129S1SvImJ_G0008449.1 mouse_genomes_project 19 44330085 44330209 + Mir6405 miRNA miRNA MGP_129S1SvImJ_T0010294.1 MGP_129S1SvImJ_G0008410.1 mouse_genomes_project 19 34686 34750 + Mir6984 miRNA miRNA MGP_129S1SvImJ_T0051993.1 MGP_129S1SvImJ_G0025202.1 mouse_genomes_project 19 45824468 45967573 + MGP_129S1SvImJ_P0051993 Gbf1 protein_coding protein_coding MGP_129S1SvImJ_T0051994.1 MGP_129S1SvImJ_G0025202.1 mouse_genomes_project 19 45824489 45936062 + Gbf1 protein_coding retained_intron MGP_129S1SvImJ_T0051995.1 MGP_129S1SvImJ_G0025202.1 mouse_genomes_project 19 45824507 45948254 + Gbf1 protein_coding retained_intron MGP_129S1SvImJ_T0051996.1 MGP_129S1SvImJ_G0025202.1 mouse_genomes_project 19 45824532 45926539 + Gbf1 protein_coding processed_transcript MGP_129S1SvImJ_T0051997.1 MGP_129S1SvImJ_G0025202.1 mouse_genomes_project 19 45926439 45967572 + MGP_129S1SvImJ_P0051997 Gbf1 protein_coding protein_coding MGP_129S1SvImJ_T0051998.1 MGP_129S1SvImJ_G0025202.1 mouse_genomes_project 19 45934131 45939831 + MGP_129S1SvImJ_P0051998 Gbf1 protein_coding protein_coding MGP_129S1SvImJ_T0052000.1 MGP_129S1SvImJ_G0025202.1 mouse_genomes_project 19 45948860 45950775 + Gbf1 protein_coding processed_transcript MGP_129S1SvImJ_T0052001.1 MGP_129S1SvImJ_G0025202.1 mouse_genomes_project 19 45949781 45953445 + Gbf1 protein_coding retained_intron MGP_129S1SvImJ_T0052002.1 MGP_129S1SvImJ_G0025202.1 mouse_genomes_project 19 45960935 45962072 + Gbf1 protein_coding retained_intron MGP_129S1SvImJ_T0052003.1 MGP_129S1SvImJ_G0025202.1 mouse_genomes_project 19 45961242 45964745 + MGP_129S1SvImJ_P0052003 Gbf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052004.1 MGP_129S1SvImJ_G0025202.1 mouse_genomes_project 19 45961397 45964548 + Gbf1 protein_coding retained_intron MGP_129S1SvImJ_T0052005.1 MGP_129S1SvImJ_G0025202.1 mouse_genomes_project 19 45963905 45965089 + Gbf1 protein_coding processed_transcript MGP_129S1SvImJ_T0052006.1 MGP_129S1SvImJ_G0025202.1 mouse_genomes_project 19 45964063 45965003 + Gbf1 protein_coding retained_intron MGP_129S1SvImJ_T0052007.1 MGP_129S1SvImJ_G0025202.1 mouse_genomes_project 19 45965625 45967043 + Gbf1 protein_coding retained_intron MGP_129S1SvImJ_T0013378.1 MGP_129S1SvImJ_G0011467.1 mouse_genomes_project 19 4856312 4857480 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0013404.1 MGP_129S1SvImJ_G0011493.1 mouse_genomes_project 19 31893010 31893755 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0051172.1 MGP_129S1SvImJ_G0024875.1 mouse_genomes_project 19 8681580 8694723 - MGP_129S1SvImJ_P0051172 Ms4a14 protein_coding protein_coding MGP_129S1SvImJ_T0051090.1 MGP_129S1SvImJ_G0024843.1 mouse_genomes_project 19 7723016 7790561 + MGP_129S1SvImJ_P0051090 Syt7 protein_coding protein_coding MGP_129S1SvImJ_T0051091.1 MGP_129S1SvImJ_G0024843.1 mouse_genomes_project 19 7723016 7790561 + MGP_129S1SvImJ_P0051091 Syt7 protein_coding protein_coding MGP_129S1SvImJ_T0051092.1 MGP_129S1SvImJ_G0024843.1 mouse_genomes_project 19 7723016 7790561 + MGP_129S1SvImJ_P0051092 Syt7 protein_coding protein_coding MGP_129S1SvImJ_T0051093.1 MGP_129S1SvImJ_G0024843.1 mouse_genomes_project 19 7723409 7790564 + MGP_129S1SvImJ_P0051093 Syt7 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0050947.1 MGP_129S1SvImJ_G0024800.1 mouse_genomes_project 19 5856550 5877069 + MGP_129S1SvImJ_P0050947 Slc22a8 protein_coding protein_coding MGP_129S1SvImJ_T0050948.1 MGP_129S1SvImJ_G0024800.1 mouse_genomes_project 19 5856550 5877069 + MGP_129S1SvImJ_P0050948 Slc22a8 protein_coding protein_coding MGP_129S1SvImJ_T0007114.1 MGP_129S1SvImJ_G0005842.1 mouse_genomes_project 19 53194739 53202922 + 1700054A03Rik lincRNA lincRNA MGP_129S1SvImJ_T0007115.1 MGP_129S1SvImJ_G0005842.1 mouse_genomes_project 19 53194773 53202922 + 1700054A03Rik lincRNA lincRNA MGP_129S1SvImJ_T0003885.1 MGP_129S1SvImJ_G0003478.1 mouse_genomes_project 19 37342992 37359710 - Gm42723 antisense antisense MGP_129S1SvImJ_T0003886.1 MGP_129S1SvImJ_G0003478.1 mouse_genomes_project 19 37358651 37359695 - Gm42723 antisense antisense MGP_129S1SvImJ_T0051765.1 MGP_129S1SvImJ_G0025128.1 mouse_genomes_project 19 41139143 41141298 - MGP_129S1SvImJ_P0051765 Frat2 protein_coding protein_coding MGP_129S1SvImJ_T0051559.1 MGP_129S1SvImJ_G0025053.1 mouse_genomes_project 19 32857268 32897673 - MGP_129S1SvImJ_P0051559 Ankrd22 protein_coding protein_coding MGP_129S1SvImJ_T0051560.1 MGP_129S1SvImJ_G0025053.1 mouse_genomes_project 19 32857644 32891679 - Ankrd22 protein_coding processed_transcript MGP_129S1SvImJ_T0051561.1 MGP_129S1SvImJ_G0025053.1 mouse_genomes_project 19 32857644 32864979 - Ankrd22 protein_coding processed_transcript MGP_129S1SvImJ_T0050356.1 MGP_129S1SvImJ_G0024638.1 mouse_genomes_project 19 819263 820787 + MGP_129S1SvImJ_P0050356 Nudt8 protein_coding protein_coding MGP_129S1SvImJ_T0050357.1 MGP_129S1SvImJ_G0024638.1 mouse_genomes_project 19 819309 824504 + MGP_129S1SvImJ_P0050357 Nudt8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050358.1 MGP_129S1SvImJ_G0024638.1 mouse_genomes_project 19 819314 820785 + MGP_129S1SvImJ_P0050358 Nudt8 protein_coding protein_coding MGP_129S1SvImJ_T0050348.1 MGP_129S1SvImJ_G0024634.1 mouse_genomes_project 19 744092 759833 + MGP_129S1SvImJ_P0050348 Unc93b1 protein_coding protein_coding MGP_129S1SvImJ_T0050349.1 MGP_129S1SvImJ_G0024634.1 mouse_genomes_project 19 744132 745653 + Unc93b1 protein_coding retained_intron MGP_129S1SvImJ_T0050350.1 MGP_129S1SvImJ_G0024634.1 mouse_genomes_project 19 744163 759836 + MGP_129S1SvImJ_P0050350 Unc93b1 protein_coding protein_coding MGP_129S1SvImJ_T0050351.1 MGP_129S1SvImJ_G0024634.1 mouse_genomes_project 19 752933 759833 + Unc93b1 protein_coding retained_intron MGP_129S1SvImJ_T0098847.1 MGP_129S1SvImJ_G0036926.1 mouse_genomes_project 19 26995138 26997897 - 4933413C19Rik sense_intronic sense_intronic MGP_129S1SvImJ_T0100887.1 MGP_129S1SvImJ_G0038954.1 mouse_genomes_project 19 5993524 5993589 + Gm22744 snoRNA snoRNA MGP_129S1SvImJ_T0051464.1 MGP_129S1SvImJ_G0025019.1 mouse_genomes_project 19 27769390 27775442 - MGP_129S1SvImJ_P0051464 Insl6 protein_coding protein_coding MGP_129S1SvImJ_T0050472.1 MGP_129S1SvImJ_G0024666.1 mouse_genomes_project 19 1387416 1497953 + MGP_129S1SvImJ_P0050472 Pcx protein_coding unknown_likely_coding MGP_129S1SvImJ_T0050473.1 MGP_129S1SvImJ_G0024666.1 mouse_genomes_project 19 1387531 1508940 + MGP_129S1SvImJ_P0050473 Pcx protein_coding protein_coding MGP_129S1SvImJ_T0050474.1 MGP_129S1SvImJ_G0024666.1 mouse_genomes_project 19 1481390 1508940 + MGP_129S1SvImJ_P0050474 Pcx protein_coding protein_coding MGP_129S1SvImJ_T0100908.1 MGP_129S1SvImJ_G0038975.1 mouse_genomes_project 19 47544162 47544278 + Gm26085 snoRNA snoRNA MGP_129S1SvImJ_T0051259.1 MGP_129S1SvImJ_G0024929.1 mouse_genomes_project 19 10678902 10679841 + MGP_129S1SvImJ_P0051259 Olfr1461 protein_coding protein_coding MGP_129S1SvImJ_T0051262.1 MGP_129S1SvImJ_G0024932.1 mouse_genomes_project 19 10831282 10832206 - MGP_129S1SvImJ_P0051262 Olfr1465 protein_coding protein_coding MGP_129S1SvImJ_T0100906.1 MGP_129S1SvImJ_G0038973.1 mouse_genomes_project 19 43566231 43566377 - Gm24336 snoRNA snoRNA MGP_129S1SvImJ_T0051155.1 MGP_129S1SvImJ_G0024869.1 mouse_genomes_project 19 8481407 8520571 - MGP_129S1SvImJ_P0051155 1700017D01Rik protein_coding protein_coding MGP_129S1SvImJ_T0051156.1 MGP_129S1SvImJ_G0024869.1 mouse_genomes_project 19 8497335 8499814 - 1700017D01Rik protein_coding retained_intron MGP_129S1SvImJ_T0051208.1 MGP_129S1SvImJ_G0024893.1 mouse_genomes_project 19 9507683 9508909 - MGP_129S1SvImJ_P0051208 Olfr1425 protein_coding protein_coding MGP_129S1SvImJ_T0050413.1 MGP_129S1SvImJ_G0024651.1 mouse_genomes_project 19 993594 995740 + MGP_129S1SvImJ_P0050413 Ptprcap protein_coding protein_coding MGP_129S1SvImJ_T0051701.1 MGP_129S1SvImJ_G0025109.1 mouse_genomes_project 19 39341769 39384193 - MGP_129S1SvImJ_P0051701 Cyp2c70 protein_coding protein_coding MGP_129S1SvImJ_T0051702.1 MGP_129S1SvImJ_G0025109.1 mouse_genomes_project 19 39352729 39384193 - MGP_129S1SvImJ_P0051702 Cyp2c70 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051703.1 MGP_129S1SvImJ_G0025109.1 mouse_genomes_project 19 39353804 39384193 - MGP_129S1SvImJ_P0051703 Cyp2c70 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051704.1 MGP_129S1SvImJ_G0025109.1 mouse_genomes_project 19 39374822 39384240 - Cyp2c70 protein_coding retained_intron MGP_129S1SvImJ_T0051149.1 MGP_129S1SvImJ_G0024866.1 mouse_genomes_project 19 8360255 8375199 - MGP_129S1SvImJ_P0051149 Ms4a15 protein_coding protein_coding MGP_129S1SvImJ_T0051150.1 MGP_129S1SvImJ_G0024866.1 mouse_genomes_project 19 8365121 8375130 - MGP_129S1SvImJ_P0051150 Ms4a15 protein_coding protein_coding MGP_129S1SvImJ_T0051151.1 MGP_129S1SvImJ_G0024866.1 mouse_genomes_project 19 8365207 8375179 - MGP_129S1SvImJ_P0051151 Ms4a15 protein_coding protein_coding MGP_129S1SvImJ_T0100895.1 MGP_129S1SvImJ_G0038962.1 mouse_genomes_project 19 17189357 17189489 + Gm25437 snoRNA snoRNA MGP_129S1SvImJ_T0010318.1 MGP_129S1SvImJ_G0008434.1 mouse_genomes_project 19 27573501 27573598 + Mir101b miRNA miRNA MGP_129S1SvImJ_T0050293.1 MGP_129S1SvImJ_G0024625.1 mouse_genomes_project 19 167201 171755 - MGP_129S1SvImJ_P0050293 Gal protein_coding protein_coding MGP_129S1SvImJ_T0051010.1 MGP_129S1SvImJ_G0024812.1 mouse_genomes_project 19 6102373 6117156 + MGP_129S1SvImJ_P0051010 Hnrnpul2 protein_coding protein_coding MGP_129S1SvImJ_T0051642.1 MGP_129S1SvImJ_G0025084.1 mouse_genomes_project 19 36692668 36696390 + MGP_129S1SvImJ_P0051642 Cyp26a1 protein_coding protein_coding MGP_129S1SvImJ_T0100885.1 MGP_129S1SvImJ_G0038952.1 mouse_genomes_project 19 5992963 5993035 + Gm24452 snoRNA snoRNA MGP_129S1SvImJ_T0051142.1 MGP_129S1SvImJ_G0024863.1 mouse_genomes_project 19 8319601 8324932 + MGP_129S1SvImJ_P0051142 Ptgdr2 protein_coding protein_coding MGP_129S1SvImJ_T0051497.1 MGP_129S1SvImJ_G0025028.1 mouse_genomes_project 19 28284572 28289147 - MGP_129S1SvImJ_P0051497 Ranbp6 protein_coding protein_coding MGP_129S1SvImJ_T0013410.1 MGP_129S1SvImJ_G0011499.1 mouse_genomes_project 19 53946536 53947069 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0052131.1 MGP_129S1SvImJ_G0025250.1 mouse_genomes_project 19 54069965 54107954 + MGP_129S1SvImJ_P0052131 Pdcd4 protein_coding protein_coding MGP_129S1SvImJ_T0052132.1 MGP_129S1SvImJ_G0025250.1 mouse_genomes_project 19 54081098 54107954 + MGP_129S1SvImJ_P0052132 Pdcd4 protein_coding protein_coding MGP_129S1SvImJ_T0052133.1 MGP_129S1SvImJ_G0025250.1 mouse_genomes_project 19 54081098 54107954 + MGP_129S1SvImJ_P0052133 Pdcd4 protein_coding protein_coding MGP_129S1SvImJ_T0100907.1 MGP_129S1SvImJ_G0038974.1 mouse_genomes_project 19 46043754 46043863 + Gm24610 snoRNA snoRNA MGP_129S1SvImJ_T0051063.1 MGP_129S1SvImJ_G0024833.1 mouse_genomes_project 19 7288976 7291366 + MGP_129S1SvImJ_P0051063 Fth1 protein_coding protein_coding MGP_129S1SvImJ_T0050352.1 MGP_129S1SvImJ_G0024635.1 mouse_genomes_project 19 771849 790131 + MGP_129S1SvImJ_P0050352 Aldh3b3 protein_coding protein_coding MGP_129S1SvImJ_T0050353.1 MGP_129S1SvImJ_G0024635.1 mouse_genomes_project 19 772010 790130 + MGP_129S1SvImJ_P0050353 Aldh3b3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0007101.1 MGP_129S1SvImJ_G0005832.1 mouse_genomes_project 19 40111886 40118596 + E030044B06Rik lincRNA lincRNA MGP_129S1SvImJ_T0051302.1 MGP_129S1SvImJ_G0024962.1 mouse_genomes_project 19 14753807 15040310 + MGP_129S1SvImJ_P0051302 Prune2 protein_coding protein_coding MGP_129S1SvImJ_T0051303.1 MGP_129S1SvImJ_G0024962.1 mouse_genomes_project 19 14947989 15040319 + MGP_129S1SvImJ_P0051303 Prune2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0051447.1 MGP_129S1SvImJ_G0025013.1 mouse_genomes_project 19 27319914 27340950 - MGP_129S1SvImJ_P0051447 4430402I18Rik protein_coding protein_coding MGP_129S1SvImJ_T0051449.1 MGP_129S1SvImJ_G0025013.1 mouse_genomes_project 19 27330301 27396828 - MGP_129S1SvImJ_P0051449 4430402I18Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051450.1 MGP_129S1SvImJ_G0025013.1 mouse_genomes_project 19 27347188 27392934 - MGP_129S1SvImJ_P0051450 4430402I18Rik protein_coding unknown_likely_coding MGP_129S1SvImJ_T0051451.1 MGP_129S1SvImJ_G0025013.1 mouse_genomes_project 19 27352581 27396898 - MGP_129S1SvImJ_P0051451 4430402I18Rik protein_coding protein_coding MGP_129S1SvImJ_T0051452.1 MGP_129S1SvImJ_G0025013.1 mouse_genomes_project 19 27352584 27358289 - 4430402I18Rik protein_coding processed_transcript MGP_129S1SvImJ_T0051453.1 MGP_129S1SvImJ_G0025013.1 mouse_genomes_project 19 27352739 27392688 - MGP_129S1SvImJ_P0051453 4430402I18Rik protein_coding protein_coding MGP_129S1SvImJ_T0051454.1 MGP_129S1SvImJ_G0025013.1 mouse_genomes_project 19 27352739 27392688 - MGP_129S1SvImJ_P0051454 4430402I18Rik protein_coding protein_coding MGP_129S1SvImJ_T0051455.1 MGP_129S1SvImJ_G0025013.1 mouse_genomes_project 19 27377501 27393007 - MGP_129S1SvImJ_P0051455 4430402I18Rik protein_coding protein_coding MGP_129S1SvImJ_T0051954.1 MGP_129S1SvImJ_G0025193.1 mouse_genomes_project 19 45372905 45406578 - MGP_129S1SvImJ_P0051954 Mgea5 protein_coding protein_coding MGP_129S1SvImJ_T0051694.1 MGP_129S1SvImJ_G0025105.1 mouse_genomes_project 19 38717078 38885432 - MGP_129S1SvImJ_P0051694 protein_coding protein_coding MGP_129S1SvImJ_T0100904.1 MGP_129S1SvImJ_G0038971.1 mouse_genomes_project 19 37086939 37087064 + Gm23300 snoRNA snoRNA MGP_129S1SvImJ_T0051826.1 MGP_129S1SvImJ_G0025149.1 mouse_genomes_project 19 42109143 42135714 - MGP_129S1SvImJ_P0051826 Hps1 protein_coding protein_coding MGP_129S1SvImJ_T0051827.1 MGP_129S1SvImJ_G0025149.1 mouse_genomes_project 19 42109233 42135695 - Hps1 protein_coding retained_intron MGP_129S1SvImJ_T0051828.1 MGP_129S1SvImJ_G0025149.1 mouse_genomes_project 19 42109233 42134382 - MGP_129S1SvImJ_P0051828 Hps1 protein_coding protein_coding MGP_129S1SvImJ_T0051829.1 MGP_129S1SvImJ_G0025149.1 mouse_genomes_project 19 42109235 42135712 - MGP_129S1SvImJ_P0051829 Hps1 protein_coding protein_coding MGP_129S1SvImJ_T0051830.1 MGP_129S1SvImJ_G0025149.1 mouse_genomes_project 19 42109619 42111851 - MGP_129S1SvImJ_P0051830 Hps1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051831.1 MGP_129S1SvImJ_G0025149.1 mouse_genomes_project 19 42112102 42135701 - MGP_129S1SvImJ_P0051831 Hps1 protein_coding protein_coding MGP_129S1SvImJ_T0051832.1 MGP_129S1SvImJ_G0025149.1 mouse_genomes_project 19 42112502 42133997 - MGP_129S1SvImJ_P0051832 Hps1 protein_coding protein_coding MGP_129S1SvImJ_T0051833.1 MGP_129S1SvImJ_G0025149.1 mouse_genomes_project 19 42114387 42117900 - Hps1 protein_coding retained_intron MGP_129S1SvImJ_T0051834.1 MGP_129S1SvImJ_G0025149.1 mouse_genomes_project 19 42122588 42125590 - Hps1 protein_coding retained_intron MGP_129S1SvImJ_T0050570.1 MGP_129S1SvImJ_G0024709.1 mouse_genomes_project 19 2434476 2437735 - MGP_129S1SvImJ_P0050570 Ctsw protein_coding protein_coding MGP_129S1SvImJ_T0010308.1 MGP_129S1SvImJ_G0008424.1 mouse_genomes_project 19 6014970 6015079 + Mir6992 miRNA miRNA MGP_129S1SvImJ_T0050713.1 MGP_129S1SvImJ_G0024747.1 mouse_genomes_project 19 3114423 3122479 + MGP_129S1SvImJ_P0050713 Cdca5 protein_coding protein_coding MGP_129S1SvImJ_T0050714.1 MGP_129S1SvImJ_G0024747.1 mouse_genomes_project 19 3115191 3122479 + Cdca5 protein_coding processed_transcript MGP_129S1SvImJ_T0050715.1 MGP_129S1SvImJ_G0024747.1 mouse_genomes_project 19 3115267 3122479 + Cdca5 protein_coding processed_transcript MGP_129S1SvImJ_T0051640.1 MGP_129S1SvImJ_G0025082.1 mouse_genomes_project 19 36538975 36678112 + MGP_129S1SvImJ_P0051640 Exoc6 protein_coding protein_coding MGP_129S1SvImJ_T0011503.1 MGP_129S1SvImJ_G0009619.1 mouse_genomes_project 19 37529020 37529103 - Gm24930 misc_RNA misc_RNA MGP_129S1SvImJ_T0050949.1 MGP_129S1SvImJ_G0024801.1 mouse_genomes_project 19 5883222 5893523 + MGP_129S1SvImJ_P0050949 Slc22a6 protein_coding protein_coding MGP_129S1SvImJ_T0050319.1 MGP_129S1SvImJ_G0024630.1 mouse_genomes_project 19 655462 701258 + MGP_129S1SvImJ_P0050319 Chka protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050320.1 MGP_129S1SvImJ_G0024630.1 mouse_genomes_project 19 655486 701262 + MGP_129S1SvImJ_P0050320 Chka protein_coding protein_coding MGP_129S1SvImJ_T0050321.1 MGP_129S1SvImJ_G0024630.1 mouse_genomes_project 19 655499 678806 + Chka protein_coding retained_intron MGP_129S1SvImJ_T0050322.1 MGP_129S1SvImJ_G0024630.1 mouse_genomes_project 19 655499 701260 + Chka protein_coding retained_intron MGP_129S1SvImJ_T0050323.1 MGP_129S1SvImJ_G0024630.1 mouse_genomes_project 19 655521 672708 + Chka protein_coding retained_intron MGP_129S1SvImJ_T0050324.1 MGP_129S1SvImJ_G0024630.1 mouse_genomes_project 19 655521 685507 + Chka protein_coding retained_intron MGP_129S1SvImJ_T0050325.1 MGP_129S1SvImJ_G0024630.1 mouse_genomes_project 19 655765 701257 + MGP_129S1SvImJ_P0050325 Chka protein_coding protein_coding MGP_129S1SvImJ_T0050326.1 MGP_129S1SvImJ_G0024630.1 mouse_genomes_project 19 655790 692757 + MGP_129S1SvImJ_P0050326 Chka protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050327.1 MGP_129S1SvImJ_G0024630.1 mouse_genomes_project 19 656052 694343 + MGP_129S1SvImJ_P0050327 Chka protein_coding protein_coding MGP_129S1SvImJ_T0050328.1 MGP_129S1SvImJ_G0024630.1 mouse_genomes_project 19 681556 696827 + MGP_129S1SvImJ_P0050328 Chka protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050329.1 MGP_129S1SvImJ_G0024630.1 mouse_genomes_project 19 682257 691478 + Chka protein_coding processed_transcript MGP_129S1SvImJ_T0050330.1 MGP_129S1SvImJ_G0024630.1 mouse_genomes_project 19 682271 691431 + Chka protein_coding retained_intron MGP_129S1SvImJ_T0050331.1 MGP_129S1SvImJ_G0024630.1 mouse_genomes_project 19 682297 693309 + Chka protein_coding processed_transcript MGP_129S1SvImJ_T0050332.1 MGP_129S1SvImJ_G0024630.1 mouse_genomes_project 19 698623 700550 + Chka protein_coding retained_intron MGP_129S1SvImJ_T0051901.1 MGP_129S1SvImJ_G0025174.1 mouse_genomes_project 19 44048540 44055395 - MGP_129S1SvImJ_P0051901 Ndufb8 protein_coding protein_coding MGP_129S1SvImJ_T0051902.1 MGP_129S1SvImJ_G0025174.1 mouse_genomes_project 19 44050208 44055409 - MGP_129S1SvImJ_P0051902 Ndufb8 protein_coding protein_coding MGP_129S1SvImJ_T0051903.1 MGP_129S1SvImJ_G0025174.1 mouse_genomes_project 19 44050221 44055388 - MGP_129S1SvImJ_P0051903 Ndufb8 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051904.1 MGP_129S1SvImJ_G0025174.1 mouse_genomes_project 19 44050223 44052849 - Ndufb8 protein_coding retained_intron MGP_129S1SvImJ_T0051905.1 MGP_129S1SvImJ_G0025174.1 mouse_genomes_project 19 44052590 44054955 - MGP_129S1SvImJ_P0051905 Ndufb8 protein_coding protein_coding MGP_129S1SvImJ_T0051906.1 MGP_129S1SvImJ_G0025174.1 mouse_genomes_project 19 44052808 44055373 - MGP_129S1SvImJ_P0051906 Ndufb8 protein_coding protein_coding MGP_129S1SvImJ_T0051907.1 MGP_129S1SvImJ_G0025174.1 mouse_genomes_project 19 44053243 44055374 - Ndufb8 protein_coding retained_intron MGP_129S1SvImJ_T0051908.1 MGP_129S1SvImJ_G0025174.1 mouse_genomes_project 19 44054669 44055395 - Ndufb8 protein_coding retained_intron MGP_129S1SvImJ_T0051909.1 MGP_129S1SvImJ_G0025174.1 mouse_genomes_project 19 44054683 44055392 - Ndufb8 protein_coding retained_intron MGP_129S1SvImJ_T0051268.1 MGP_129S1SvImJ_G0024938.1 mouse_genomes_project 19 11005142 11008056 + MGP_129S1SvImJ_P0051268 protein_coding protein_coding MGP_129S1SvImJ_T0051146.1 MGP_129S1SvImJ_G0024865.1 mouse_genomes_project 19 8344241 8356619 - MGP_129S1SvImJ_P0051146 Ms4a10 protein_coding protein_coding MGP_129S1SvImJ_T0051147.1 MGP_129S1SvImJ_G0024865.1 mouse_genomes_project 19 8344245 8356594 - MGP_129S1SvImJ_P0051147 Ms4a10 protein_coding protein_coding MGP_129S1SvImJ_T0051148.1 MGP_129S1SvImJ_G0024865.1 mouse_genomes_project 19 8344248 8347805 - MGP_129S1SvImJ_P0051148 Ms4a10 protein_coding protein_coding MGP_129S1SvImJ_T0051209.1 MGP_129S1SvImJ_G0024894.1 mouse_genomes_project 19 9522427 9529752 - MGP_129S1SvImJ_P0051209 protein_coding protein_coding MGP_129S1SvImJ_T0051367.1 MGP_129S1SvImJ_G0024986.1 mouse_genomes_project 19 21722550 21822304 - MGP_129S1SvImJ_P0051367 1700028P14Rik protein_coding protein_coding MGP_129S1SvImJ_T0050885.1 MGP_129S1SvImJ_G0024781.1 mouse_genomes_project 19 4096895 4126031 - MGP_129S1SvImJ_P0050885 Fermt3 protein_coding protein_coding MGP_129S1SvImJ_T0051107.1 MGP_129S1SvImJ_G0024852.1 mouse_genomes_project 19 7955584 7979770 + MGP_129S1SvImJ_P0051107 Ddb1 protein_coding protein_coding MGP_129S1SvImJ_T0050953.1 MGP_129S1SvImJ_G0024803.1 mouse_genomes_project 19 5975066 5991522 - MGP_129S1SvImJ_P0050953 Slc3a2 protein_coding protein_coding MGP_129S1SvImJ_T0050954.1 MGP_129S1SvImJ_G0024803.1 mouse_genomes_project 19 5976808 5980854 - MGP_129S1SvImJ_P0050954 Slc3a2 protein_coding protein_coding MGP_129S1SvImJ_T0050955.1 MGP_129S1SvImJ_G0024803.1 mouse_genomes_project 19 5977234 5980855 - MGP_129S1SvImJ_P0050955 Slc3a2 protein_coding protein_coding MGP_129S1SvImJ_T0050956.1 MGP_129S1SvImJ_G0024803.1 mouse_genomes_project 19 5977266 5981932 - MGP_129S1SvImJ_P0050956 Slc3a2 protein_coding protein_coding MGP_129S1SvImJ_T0050957.1 MGP_129S1SvImJ_G0024803.1 mouse_genomes_project 19 5980656 5991625 - Slc3a2 protein_coding retained_intron MGP_129S1SvImJ_T0050958.1 MGP_129S1SvImJ_G0024803.1 mouse_genomes_project 19 5980907 5981595 - MGP_129S1SvImJ_P0050958 Slc3a2 protein_coding protein_coding MGP_129S1SvImJ_T0050959.1 MGP_129S1SvImJ_G0024803.1 mouse_genomes_project 19 5980918 5981682 - MGP_129S1SvImJ_P0050959 Slc3a2 protein_coding protein_coding MGP_129S1SvImJ_T0013386.1 MGP_129S1SvImJ_G0011475.1 mouse_genomes_project 19 11619093 11619882 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0051594.1 MGP_129S1SvImJ_G0025071.1 mouse_genomes_project 19 35243575 35333593 + MGP_129S1SvImJ_P0051594 Pcgf5 protein_coding protein_coding MGP_129S1SvImJ_T0051595.1 MGP_129S1SvImJ_G0025071.1 mouse_genomes_project 19 35278286 35333593 + MGP_129S1SvImJ_P0051595 Pcgf5 protein_coding protein_coding MGP_129S1SvImJ_T0051596.1 MGP_129S1SvImJ_G0025071.1 mouse_genomes_project 19 35278776 35338375 + MGP_129S1SvImJ_P0051596 Pcgf5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0051004.1 MGP_129S1SvImJ_G0024809.1 mouse_genomes_project 19 6074188 6079576 - MGP_129S1SvImJ_P0051004 Polr2g protein_coding protein_coding MGP_129S1SvImJ_T0100893.1 MGP_129S1SvImJ_G0038960.1 mouse_genomes_project 19 9332304 9332438 - Gm22272 snoRNA snoRNA MGP_129S1SvImJ_T0051152.1 MGP_129S1SvImJ_G0024867.1 mouse_genomes_project 19 8378973 8401412 - MGP_129S1SvImJ_P0051152 Ms4a18 protein_coding protein_coding MGP_129S1SvImJ_T0051049.1 MGP_129S1SvImJ_G0024826.1 mouse_genomes_project 19 6242614 6254814 + MGP_129S1SvImJ_P0051049 Tut1 protein_coding protein_coding MGP_129S1SvImJ_T0050427.1 MGP_129S1SvImJ_G0024656.1 mouse_genomes_project 19 1039423 1045829 - MGP_129S1SvImJ_P0050427 Rad9a protein_coding protein_coding MGP_129S1SvImJ_T0051515.1 MGP_129S1SvImJ_G0025034.1 mouse_genomes_project 19 29098134 29101939 - MGP_129S1SvImJ_P0051515 Dkk1 protein_coding protein_coding MGP_129S1SvImJ_T0051279.1 MGP_129S1SvImJ_G0024949.1 mouse_genomes_project 19 11380284 11381336 - MGP_129S1SvImJ_P0051279 Olfr1499 protein_coding protein_coding MGP_129S1SvImJ_T0051503.1 MGP_129S1SvImJ_G0025030.1 mouse_genomes_project 19 28492374 28494605 + MGP_129S1SvImJ_P0051503 Trpd52l3 protein_coding protein_coding MGP_129S1SvImJ_T0011496.1 MGP_129S1SvImJ_G0009612.1 mouse_genomes_project 19 14861092 14861499 - Gm27970 misc_RNA misc_RNA MGP_129S1SvImJ_T0051097.1 MGP_129S1SvImJ_G0024847.1 mouse_genomes_project 19 7870521 7894362 + MGP_129S1SvImJ_P0051097 Cpsf7 protein_coding protein_coding MGP_129S1SvImJ_T0011505.1 MGP_129S1SvImJ_G0009621.1 mouse_genomes_project 19 41031663 41031901 + Gm22601 misc_RNA misc_RNA MGP_129S1SvImJ_T0051167.1 MGP_129S1SvImJ_G0024874.1 mouse_genomes_project 19 8651983 8658753 - Ms4a5 protein_coding retained_intron MGP_129S1SvImJ_T0051168.1 MGP_129S1SvImJ_G0024874.1 mouse_genomes_project 19 8652611 8663123 - MGP_129S1SvImJ_P0051168 Ms4a5 protein_coding protein_coding MGP_129S1SvImJ_T0051169.1 MGP_129S1SvImJ_G0024874.1 mouse_genomes_project 19 8652611 8663183 - MGP_129S1SvImJ_P0051169 Ms4a5 protein_coding protein_coding MGP_129S1SvImJ_T0051170.1 MGP_129S1SvImJ_G0024874.1 mouse_genomes_project 19 8652906 8658964 - Ms4a5 protein_coding processed_transcript MGP_129S1SvImJ_T0051171.1 MGP_129S1SvImJ_G0024874.1 mouse_genomes_project 19 8656046 8663170 - MGP_129S1SvImJ_P0051171 Ms4a5 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050734.1 MGP_129S1SvImJ_G0024753.1 mouse_genomes_project 19 3223117 3267766 + MGP_129S1SvImJ_P0050734 Majin protein_coding protein_coding MGP_129S1SvImJ_T0050735.1 MGP_129S1SvImJ_G0024753.1 mouse_genomes_project 19 3223196 3267772 + MGP_129S1SvImJ_P0050735 Majin protein_coding protein_coding MGP_129S1SvImJ_T0052287.1 MGP_129S1SvImJ_G0025297.1 mouse_genomes_project 19 61447355 61473063 - MGP_129S1SvImJ_P0052287 Sfxn4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052288.1 MGP_129S1SvImJ_G0025297.1 mouse_genomes_project 19 61448765 61473115 - MGP_129S1SvImJ_P0052288 Sfxn4 protein_coding protein_coding MGP_129S1SvImJ_T0052289.1 MGP_129S1SvImJ_G0025297.1 mouse_genomes_project 19 61448775 61473060 - MGP_129S1SvImJ_P0052289 Sfxn4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052290.1 MGP_129S1SvImJ_G0025297.1 mouse_genomes_project 19 61448990 61472973 - MGP_129S1SvImJ_P0052290 Sfxn4 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0051815.1 MGP_129S1SvImJ_G0025146.1 mouse_genomes_project 19 41854302 41930776 + MGP_129S1SvImJ_P0051815 R3hcc1l protein_coding protein_coding MGP_129S1SvImJ_T0051816.1 MGP_129S1SvImJ_G0025146.1 mouse_genomes_project 19 41854341 41926835 + MGP_129S1SvImJ_P0051816 R3hcc1l protein_coding protein_coding MGP_129S1SvImJ_T0051817.1 MGP_129S1SvImJ_G0025146.1 mouse_genomes_project 19 41854365 41911302 + MGP_129S1SvImJ_P0051817 R3hcc1l protein_coding protein_coding MGP_129S1SvImJ_T0051818.1 MGP_129S1SvImJ_G0025146.1 mouse_genomes_project 19 41899652 41911869 + R3hcc1l protein_coding retained_intron MGP_129S1SvImJ_T0051819.1 MGP_129S1SvImJ_G0025146.1 mouse_genomes_project 19 41916995 41920591 + R3hcc1l protein_coding retained_intron MGP_129S1SvImJ_T0017690.1 MGP_129S1SvImJ_G0015374.1 mouse_genomes_project 19 961095 967395 + Tmem134 processed_transcript processed_transcript MGP_129S1SvImJ_T0017691.1 MGP_129S1SvImJ_G0015374.1 mouse_genomes_project 19 961120 966554 + Tmem134 processed_transcript processed_transcript MGP_129S1SvImJ_T0017692.1 MGP_129S1SvImJ_G0015374.1 mouse_genomes_project 19 961120 966837 + Tmem134 processed_transcript processed_transcript MGP_129S1SvImJ_T0017693.1 MGP_129S1SvImJ_G0015374.1 mouse_genomes_project 19 961120 966837 + Tmem134 processed_transcript processed_transcript MGP_129S1SvImJ_T0017694.1 MGP_129S1SvImJ_G0015374.1 mouse_genomes_project 19 961120 966836 + Tmem134 processed_transcript retained_intron MGP_129S1SvImJ_T0017695.1 MGP_129S1SvImJ_G0015374.1 mouse_genomes_project 19 961120 966837 + Tmem134 processed_transcript processed_transcript MGP_129S1SvImJ_T0017696.1 MGP_129S1SvImJ_G0015374.1 mouse_genomes_project 19 961121 967415 + Tmem134 processed_transcript processed_transcript MGP_129S1SvImJ_T0017697.1 MGP_129S1SvImJ_G0015374.1 mouse_genomes_project 19 961121 967417 + Tmem134 processed_transcript processed_transcript MGP_129S1SvImJ_T0017698.1 MGP_129S1SvImJ_G0015374.1 mouse_genomes_project 19 961121 967395 + Tmem134 processed_transcript retained_intron MGP_129S1SvImJ_T0017699.1 MGP_129S1SvImJ_G0015374.1 mouse_genomes_project 19 961136 966837 + Tmem134 processed_transcript processed_transcript MGP_129S1SvImJ_T0017700.1 MGP_129S1SvImJ_G0015374.1 mouse_genomes_project 19 961140 966845 + Tmem134 processed_transcript processed_transcript MGP_129S1SvImJ_T0017701.1 MGP_129S1SvImJ_G0015374.1 mouse_genomes_project 19 961148 966840 + Tmem134 processed_transcript processed_transcript MGP_129S1SvImJ_T0017702.1 MGP_129S1SvImJ_G0015374.1 mouse_genomes_project 19 961150 966837 + Tmem134 processed_transcript processed_transcript MGP_129S1SvImJ_T0017703.1 MGP_129S1SvImJ_G0015374.1 mouse_genomes_project 19 961150 962900 + Tmem134 processed_transcript processed_transcript MGP_129S1SvImJ_T0017704.1 MGP_129S1SvImJ_G0015374.1 mouse_genomes_project 19 961190 966842 + Tmem134 processed_transcript processed_transcript MGP_129S1SvImJ_T0017705.1 MGP_129S1SvImJ_G0015374.1 mouse_genomes_project 19 962732 966367 + Tmem134 processed_transcript processed_transcript MGP_129S1SvImJ_T0052048.1 MGP_129S1SvImJ_G0025219.1 mouse_genomes_project 19 46784274 46794874 + MGP_129S1SvImJ_P0052048 Ina protein_coding protein_coding MGP_129S1SvImJ_T0051842.1 MGP_129S1SvImJ_G0025153.1 mouse_genomes_project 19 43020087 43023657 + MGP_129S1SvImJ_P0051842 Nkx2-3 protein_coding protein_coding MGP_129S1SvImJ_T0050377.1 MGP_129S1SvImJ_G0024644.1 mouse_genomes_project 19 911623 915722 + MGP_129S1SvImJ_P0050377 Cabp2 protein_coding protein_coding MGP_129S1SvImJ_T0050378.1 MGP_129S1SvImJ_G0024644.1 mouse_genomes_project 19 912533 917382 + MGP_129S1SvImJ_P0050378 Cabp2 protein_coding protein_coding MGP_129S1SvImJ_T0050379.1 MGP_129S1SvImJ_G0024644.1 mouse_genomes_project 19 913535 917386 + MGP_129S1SvImJ_P0050379 Cabp2 protein_coding protein_coding MGP_129S1SvImJ_T0050380.1 MGP_129S1SvImJ_G0024644.1 mouse_genomes_project 19 913564 917386 + MGP_129S1SvImJ_P0050380 Cabp2 protein_coding protein_coding MGP_129S1SvImJ_T0050381.1 MGP_129S1SvImJ_G0024644.1 mouse_genomes_project 19 916520 917383 + Cabp2 protein_coding processed_transcript MGP_129S1SvImJ_T0101881.1 MGP_129S1SvImJ_G0039809.1 mouse_genomes_project 19 59185301 59187710 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101882.1 MGP_129S1SvImJ_G0039809.1 mouse_genomes_project 19 59185301 59185716 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101883.1 MGP_129S1SvImJ_G0039809.1 mouse_genomes_project 19 59185467 59203258 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0052055.1 MGP_129S1SvImJ_G0025225.1 mouse_genomes_project 19 46918515 46921702 - MGP_129S1SvImJ_P0052055 Calhm1 protein_coding protein_coding MGP_129S1SvImJ_T0052040.1 MGP_129S1SvImJ_G0025215.1 mouse_genomes_project 19 46442159 46458846 + MGP_129S1SvImJ_P0052040 Borcs7 protein_coding protein_coding MGP_129S1SvImJ_T0051325.1 MGP_129S1SvImJ_G0024971.1 mouse_genomes_project 19 16825976 16898060 - MGP_129S1SvImJ_P0051325 Rorb protein_coding protein_coding MGP_129S1SvImJ_T0051326.1 MGP_129S1SvImJ_G0024971.1 mouse_genomes_project 19 16833944 17010353 - MGP_129S1SvImJ_P0051326 Rorb protein_coding protein_coding MGP_129S1SvImJ_T0051327.1 MGP_129S1SvImJ_G0024971.1 mouse_genomes_project 19 16871964 16898043 - Rorb protein_coding retained_intron MGP_129S1SvImJ_T0051328.1 MGP_129S1SvImJ_G0024971.1 mouse_genomes_project 19 16871981 16898054 - Rorb protein_coding retained_intron MGP_129S1SvImJ_T0050658.1 MGP_129S1SvImJ_G0024734.1 mouse_genomes_project 19 2956506 2983366 - MGP_129S1SvImJ_P0050658 Pola2 protein_coding protein_coding MGP_129S1SvImJ_T0050659.1 MGP_129S1SvImJ_G0024734.1 mouse_genomes_project 19 2957068 2983366 - MGP_129S1SvImJ_P0050659 Pola2 protein_coding protein_coding MGP_129S1SvImJ_T0051755.1 MGP_129S1SvImJ_G0025125.1 mouse_genomes_project 19 40868076 40870869 + MGP_129S1SvImJ_P0051755 AI606181 protein_coding protein_coding MGP_129S1SvImJ_T0007074.1 MGP_129S1SvImJ_G0005813.1 mouse_genomes_project 19 8417085 8420822 - lincRNA lincRNA MGP_129S1SvImJ_T0051766.1 MGP_129S1SvImJ_G0025129.1 mouse_genomes_project 19 41158816 41198141 - MGP_129S1SvImJ_P0051766 Rrp12 protein_coding protein_coding MGP_129S1SvImJ_T0003860.1 MGP_129S1SvImJ_G0003463.1 mouse_genomes_project 19 819441 819916 - Gm16312 antisense antisense MGP_129S1SvImJ_T0051310.1 MGP_129S1SvImJ_G0024965.1 mouse_genomes_project 19 15260828 15696124 - MGP_129S1SvImJ_P0051310 Pcsk5 protein_coding protein_coding MGP_129S1SvImJ_T0051311.1 MGP_129S1SvImJ_G0024965.1 mouse_genomes_project 19 15389296 15696124 - MGP_129S1SvImJ_P0051311 Pcsk5 protein_coding protein_coding MGP_129S1SvImJ_T0051312.1 MGP_129S1SvImJ_G0024965.1 mouse_genomes_project 19 15391851 15695648 - MGP_129S1SvImJ_P0051312 Pcsk5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0101664.1 MGP_129S1SvImJ_G0039688.1 mouse_genomes_project 19 10340555 10341298 + transcribed_processed_pseudogene processed_transcript MGP_129S1SvImJ_T0101665.1 MGP_129S1SvImJ_G0039688.1 mouse_genomes_project 19 10340739 10341078 + transcribed_processed_pseudogene transcribed_processed_pseudogene MGP_129S1SvImJ_T0051204.1 MGP_129S1SvImJ_G0024889.1 mouse_genomes_project 19 9311255 9344989 + MGP_129S1SvImJ_P0051204 Patl1 protein_coding protein_coding MGP_129S1SvImJ_T0003879.1 MGP_129S1SvImJ_G0003474.1 mouse_genomes_project 19 10187741 10204487 - Gm15962 antisense antisense MGP_129S1SvImJ_T0003880.1 MGP_129S1SvImJ_G0003474.1 mouse_genomes_project 19 10199073 10204531 - Gm15962 antisense antisense MGP_129S1SvImJ_T0051462.1 MGP_129S1SvImJ_G0025018.1 mouse_genomes_project 19 27695386 27758792 + MGP_129S1SvImJ_P0051462 Jak2 protein_coding protein_coding MGP_129S1SvImJ_T0051463.1 MGP_129S1SvImJ_G0025018.1 mouse_genomes_project 19 27695386 27758792 + MGP_129S1SvImJ_P0051463 Jak2 protein_coding protein_coding MGP_129S1SvImJ_T0100888.1 MGP_129S1SvImJ_G0038955.1 mouse_genomes_project 19 5993773 5993842 + Gm22680 snoRNA snoRNA MGP_129S1SvImJ_T0051070.1 MGP_129S1SvImJ_G0024836.1 mouse_genomes_project 19 7350703 7368721 + MGP_129S1SvImJ_P0051070 Fads3 protein_coding protein_coding MGP_129S1SvImJ_T0051666.1 MGP_129S1SvImJ_G0025093.1 mouse_genomes_project 19 37536971 37581926 + Plce1 protein_coding processed_transcript MGP_129S1SvImJ_T0051667.1 MGP_129S1SvImJ_G0025093.1 mouse_genomes_project 19 37536983 37859650 + MGP_129S1SvImJ_P0051667 Plce1 protein_coding protein_coding MGP_129S1SvImJ_T0051668.1 MGP_129S1SvImJ_G0025093.1 mouse_genomes_project 19 37537154 37769529 + MGP_129S1SvImJ_P0051668 Plce1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0051669.1 MGP_129S1SvImJ_G0025093.1 mouse_genomes_project 19 37582056 37861280 + MGP_129S1SvImJ_P0051669 Plce1 protein_coding protein_coding MGP_129S1SvImJ_T0051670.1 MGP_129S1SvImJ_G0025093.1 mouse_genomes_project 19 37582068 37859015 + MGP_129S1SvImJ_P0051670 Plce1 protein_coding protein_coding MGP_129S1SvImJ_T0051671.1 MGP_129S1SvImJ_G0025093.1 mouse_genomes_project 19 37646246 37718879 + MGP_129S1SvImJ_P0051671 Plce1 protein_coding protein_coding MGP_129S1SvImJ_T0051672.1 MGP_129S1SvImJ_G0025093.1 mouse_genomes_project 19 37794731 37859808 + Plce1 protein_coding retained_intron MGP_129S1SvImJ_T0051673.1 MGP_129S1SvImJ_G0025093.1 mouse_genomes_project 19 37809063 37827456 + Plce1 protein_coding retained_intron MGP_129S1SvImJ_T0051897.1 MGP_129S1SvImJ_G0025171.1 mouse_genomes_project 19 43989145 44012953 + MGP_129S1SvImJ_P0051897 Wnt8b protein_coding protein_coding MGP_129S1SvImJ_T0003881.1 MGP_129S1SvImJ_G0003475.1 mouse_genomes_project 19 20527026 20536877 - Gm27151 antisense antisense MGP_129S1SvImJ_T0003882.1 MGP_129S1SvImJ_G0003475.1 mouse_genomes_project 19 20527056 20537600 - Gm27151 antisense antisense MGP_129S1SvImJ_T0051363.1 MGP_129S1SvImJ_G0024983.1 mouse_genomes_project 19 21269405 21299439 + MGP_129S1SvImJ_P0051363 Klf9 protein_coding protein_coding MGP_129S1SvImJ_T0010338.1 MGP_129S1SvImJ_G0008454.1 mouse_genomes_project 19 49682228 49682307 - Gm27935 miRNA miRNA MGP_129S1SvImJ_T0051386.1 MGP_129S1SvImJ_G0024998.1 mouse_genomes_project 19 23165103 23167448 - MGP_129S1SvImJ_P0051386 Foxd4 protein_coding protein_coding MGP_129S1SvImJ_T0051254.1 MGP_129S1SvImJ_G0024924.1 mouse_genomes_project 19 10539511 10540435 - MGP_129S1SvImJ_P0051254 Olfr1453 protein_coding protein_coding MGP_129S1SvImJ_T0098344.1 MGP_129S1SvImJ_G0036429.1 mouse_genomes_project 19 10592664 10593179 - pseudogene pseudogene MGP_129S1SvImJ_T0052139.1 MGP_129S1SvImJ_G0025255.1 mouse_genomes_project 19 55443864 55452767 + MGP_129S1SvImJ_P0052139 Tectb protein_coding protein_coding MGP_129S1SvImJ_T0052140.1 MGP_129S1SvImJ_G0025255.1 mouse_genomes_project 19 55443867 55458042 + MGP_129S1SvImJ_P0052140 Tectb protein_coding protein_coding MGP_129S1SvImJ_T0052141.1 MGP_129S1SvImJ_G0025255.1 mouse_genomes_project 19 55444016 55459485 + MGP_129S1SvImJ_P0052141 Tectb protein_coding protein_coding MGP_129S1SvImJ_T0052142.1 MGP_129S1SvImJ_G0025255.1 mouse_genomes_project 19 55452679 55457867 + MGP_129S1SvImJ_P0052142 Tectb protein_coding protein_coding MGP_129S1SvImJ_T0052143.1 MGP_129S1SvImJ_G0025255.1 mouse_genomes_project 19 55452731 55453426 + Tectb protein_coding retained_intron MGP_129S1SvImJ_T0052144.1 MGP_129S1SvImJ_G0025255.1 mouse_genomes_project 19 55455134 55459476 + Tectb protein_coding processed_transcript MGP_129S1SvImJ_T0051641.1 MGP_129S1SvImJ_G0025083.1 mouse_genomes_project 19 36680446 36688254 + MGP_129S1SvImJ_P0051641 Cyp26c1 protein_coding protein_coding MGP_129S1SvImJ_T0010297.1 MGP_129S1SvImJ_G0008413.1 mouse_genomes_project 19 1511085 1511143 - Mir6986 miRNA miRNA MGP_129S1SvImJ_T0050522.1 MGP_129S1SvImJ_G0024683.1 mouse_genomes_project 19 1880570 1885293 + MGP_129S1SvImJ_P0050522 Mrpl11 protein_coding protein_coding MGP_129S1SvImJ_T0051207.1 MGP_129S1SvImJ_G0024892.1 mouse_genomes_project 19 9482805 9484983 - MGP_129S1SvImJ_P0051207 Olfr1424 protein_coding protein_coding MGP_129S1SvImJ_T0052291.1 MGP_129S1SvImJ_G0025298.1 mouse_genomes_project 19 61475884 61488674 - MGP_129S1SvImJ_P0052291 Prdx3 protein_coding protein_coding MGP_129S1SvImJ_T0051475.1 MGP_129S1SvImJ_G0025022.1 mouse_genomes_project 19 27821778 27846578 + MGP_129S1SvImJ_P0051475 Cd274 protein_coding protein_coding MGP_129S1SvImJ_T0052253.1 MGP_129S1SvImJ_G0025280.1 mouse_genomes_project 19 59248650 59266010 + MGP_129S1SvImJ_P0052253 Pnliprp2 protein_coding protein_coding MGP_129S1SvImJ_T0013408.1 MGP_129S1SvImJ_G0011497.1 mouse_genomes_project 19 46423527 46424534 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099626.1 MGP_129S1SvImJ_G0037693.1 mouse_genomes_project 19 250399 250504 + Gm23940 snRNA snRNA MGP_129S1SvImJ_T0050564.1 MGP_129S1SvImJ_G0024705.1 mouse_genomes_project 19 2392214 2394371 + AI837181 protein_coding processed_transcript MGP_129S1SvImJ_T0050565.1 MGP_129S1SvImJ_G0024705.1 mouse_genomes_project 19 2392214 2394371 + MGP_129S1SvImJ_P0050565 AI837181 protein_coding protein_coding MGP_129S1SvImJ_T0050676.1 MGP_129S1SvImJ_G0024742.1 mouse_genomes_project 19 3092040 3097002 - MGP_129S1SvImJ_P0050676 Tm7sf2 protein_coding protein_coding MGP_129S1SvImJ_T0050677.1 MGP_129S1SvImJ_G0024742.1 mouse_genomes_project 19 3092040 3097041 - MGP_129S1SvImJ_P0050677 Tm7sf2 protein_coding protein_coding MGP_129S1SvImJ_T0050678.1 MGP_129S1SvImJ_G0024742.1 mouse_genomes_project 19 3092041 3097041 - MGP_129S1SvImJ_P0050678 Tm7sf2 protein_coding protein_coding MGP_129S1SvImJ_T0050679.1 MGP_129S1SvImJ_G0024742.1 mouse_genomes_project 19 3092120 3097002 - MGP_129S1SvImJ_P0050679 Tm7sf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050680.1 MGP_129S1SvImJ_G0024742.1 mouse_genomes_project 19 3092197 3097007 - MGP_129S1SvImJ_P0050680 Tm7sf2 protein_coding protein_coding MGP_129S1SvImJ_T0050681.1 MGP_129S1SvImJ_G0024742.1 mouse_genomes_project 19 3093041 3096984 - MGP_129S1SvImJ_P0050681 Tm7sf2 protein_coding protein_coding MGP_129S1SvImJ_T0050682.1 MGP_129S1SvImJ_G0024742.1 mouse_genomes_project 19 3093312 3097007 - MGP_129S1SvImJ_P0050682 Tm7sf2 protein_coding protein_coding MGP_129S1SvImJ_T0050683.1 MGP_129S1SvImJ_G0024742.1 mouse_genomes_project 19 3094725 3096975 - Tm7sf2 protein_coding retained_intron MGP_129S1SvImJ_T0050684.1 MGP_129S1SvImJ_G0024742.1 mouse_genomes_project 19 3095327 3097049 - Tm7sf2 protein_coding retained_intron MGP_129S1SvImJ_T0050685.1 MGP_129S1SvImJ_G0024742.1 mouse_genomes_project 19 3095344 3097066 - Tm7sf2 protein_coding retained_intron MGP_129S1SvImJ_T0050686.1 MGP_129S1SvImJ_G0024742.1 mouse_genomes_project 19 3095383 3096291 - Tm7sf2 protein_coding retained_intron MGP_129S1SvImJ_T0050687.1 MGP_129S1SvImJ_G0024742.1 mouse_genomes_project 19 3095385 3097054 - MGP_129S1SvImJ_P0050687 Tm7sf2 protein_coding protein_coding MGP_129S1SvImJ_T0050688.1 MGP_129S1SvImJ_G0024742.1 mouse_genomes_project 19 3095777 3096760 - Tm7sf2 protein_coding retained_intron MGP_129S1SvImJ_T0050689.1 MGP_129S1SvImJ_G0024742.1 mouse_genomes_project 19 3096361 3097572 - MGP_129S1SvImJ_P0050689 Tm7sf2 protein_coding protein_coding MGP_129S1SvImJ_T0051339.1 MGP_129S1SvImJ_G0024976.1 mouse_genomes_project 19 19293335 19301679 + MGP_129S1SvImJ_P0051339 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0051340.1 MGP_129S1SvImJ_G0024976.1 mouse_genomes_project 19 19293794 19301541 + MGP_129S1SvImJ_P0051340 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051341.1 MGP_129S1SvImJ_G0024976.1 mouse_genomes_project 19 19294353 19298146 + MGP_129S1SvImJ_P0051341 protein_coding protein_coding MGP_129S1SvImJ_T0051342.1 MGP_129S1SvImJ_G0024976.1 mouse_genomes_project 19 19297087 19301772 + protein_coding retained_intron MGP_129S1SvImJ_T0051343.1 MGP_129S1SvImJ_G0024976.1 mouse_genomes_project 19 19297147 19301997 + protein_coding retained_intron MGP_129S1SvImJ_T0100897.1 MGP_129S1SvImJ_G0038964.1 mouse_genomes_project 19 20312955 20313053 - Gm22506 snoRNA snoRNA MGP_129S1SvImJ_T0013393.1 MGP_129S1SvImJ_G0011482.1 mouse_genomes_project 19 22946928 22947899 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0051814.1 MGP_129S1SvImJ_G0025145.1 mouse_genomes_project 19 41616593 41769517 - MGP_129S1SvImJ_P0051814 Crtac1 protein_coding protein_coding MGP_129S1SvImJ_T0052042.1 MGP_129S1SvImJ_G0025217.1 mouse_genomes_project 19 46521010 46641627 + MGP_129S1SvImJ_P0052042 Cnnm2 protein_coding protein_coding MGP_129S1SvImJ_T0052043.1 MGP_129S1SvImJ_G0025217.1 mouse_genomes_project 19 46521010 46641627 + MGP_129S1SvImJ_P0052043 Cnnm2 protein_coding protein_coding MGP_129S1SvImJ_T0050527.1 MGP_129S1SvImJ_G0024688.1 mouse_genomes_project 19 1976906 1983173 + MGP_129S1SvImJ_P0050527 Rin1 protein_coding protein_coding MGP_129S1SvImJ_T0050528.1 MGP_129S1SvImJ_G0024688.1 mouse_genomes_project 19 1976957 1983182 + MGP_129S1SvImJ_P0050528 Rin1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0052275.1 MGP_129S1SvImJ_G0025293.1 mouse_genomes_project 19 61102369 61165618 - MGP_129S1SvImJ_P0052275 Cacul1 protein_coding protein_coding MGP_129S1SvImJ_T0052276.1 MGP_129S1SvImJ_G0025293.1 mouse_genomes_project 19 61102369 61165618 - MGP_129S1SvImJ_P0052276 Cacul1 protein_coding protein_coding MGP_129S1SvImJ_T0052277.1 MGP_129S1SvImJ_G0025293.1 mouse_genomes_project 19 61102369 61165618 - MGP_129S1SvImJ_P0052277 Cacul1 protein_coding protein_coding MGP_129S1SvImJ_T0052280.1 MGP_129S1SvImJ_G0025296.1 mouse_genomes_project 19 61418031 61441401 + MGP_129S1SvImJ_P0052280 Fam45a protein_coding protein_coding MGP_129S1SvImJ_T0052281.1 MGP_129S1SvImJ_G0025296.1 mouse_genomes_project 19 61418037 61446320 + MGP_129S1SvImJ_P0052281 Fam45a protein_coding protein_coding MGP_129S1SvImJ_T0052282.1 MGP_129S1SvImJ_G0025296.1 mouse_genomes_project 19 61418042 61424680 + Fam45a protein_coding retained_intron MGP_129S1SvImJ_T0052283.1 MGP_129S1SvImJ_G0025296.1 mouse_genomes_project 19 61418057 61446320 + MGP_129S1SvImJ_P0052283 Fam45a protein_coding protein_coding MGP_129S1SvImJ_T0052284.1 MGP_129S1SvImJ_G0025296.1 mouse_genomes_project 19 61418057 61428673 + MGP_129S1SvImJ_P0052284 Fam45a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052285.1 MGP_129S1SvImJ_G0025296.1 mouse_genomes_project 19 61418490 61421020 + Fam45a protein_coding processed_transcript MGP_129S1SvImJ_T0052286.1 MGP_129S1SvImJ_G0025296.1 mouse_genomes_project 19 61438706 61445207 + Fam45a protein_coding retained_intron MGP_129S1SvImJ_T0051179.1 MGP_129S1SvImJ_G0024878.1 mouse_genomes_project 19 8795458 8808117 + MGP_129S1SvImJ_P0051179 Ms4a4c protein_coding protein_coding MGP_129S1SvImJ_T0051180.1 MGP_129S1SvImJ_G0024878.1 mouse_genomes_project 19 8798349 8817479 + MGP_129S1SvImJ_P0051180 Ms4a4c protein_coding protein_coding MGP_129S1SvImJ_T0051181.1 MGP_129S1SvImJ_G0024878.1 mouse_genomes_project 19 8806538 8816701 + MGP_129S1SvImJ_P0051181 Ms4a4c protein_coding protein_coding MGP_129S1SvImJ_T0050598.1 MGP_129S1SvImJ_G0024714.1 mouse_genomes_project 19 2473293 2474314 - MGP_129S1SvImJ_P0050598 1700020D05Rik protein_coding protein_coding MGP_129S1SvImJ_T0050660.1 MGP_129S1SvImJ_G0024735.1 mouse_genomes_project 19 2989374 3008115 - MGP_129S1SvImJ_P0050660 Slc22a20 protein_coding protein_coding MGP_129S1SvImJ_T0051199.1 MGP_129S1SvImJ_G0024886.1 mouse_genomes_project 19 9165094 9211548 - MGP_129S1SvImJ_P0051199 Stx3 protein_coding protein_coding MGP_129S1SvImJ_T0051200.1 MGP_129S1SvImJ_G0024886.1 mouse_genomes_project 19 9165094 9211031 - MGP_129S1SvImJ_P0051200 Stx3 protein_coding protein_coding MGP_129S1SvImJ_T0051201.1 MGP_129S1SvImJ_G0024886.1 mouse_genomes_project 19 9167462 9211548 - MGP_129S1SvImJ_P0051201 Stx3 protein_coding protein_coding MGP_129S1SvImJ_T0051893.1 MGP_129S1SvImJ_G0025169.1 mouse_genomes_project 19 43800820 43802456 + Scd4 protein_coding retained_intron MGP_129S1SvImJ_T0051894.1 MGP_129S1SvImJ_G0025169.1 mouse_genomes_project 19 43800820 43816510 + MGP_129S1SvImJ_P0051894 Scd4 protein_coding protein_coding MGP_129S1SvImJ_T0051555.1 MGP_129S1SvImJ_G0025051.1 mouse_genomes_project 19 32797691 32819649 + MGP_129S1SvImJ_P0051555 Lipn protein_coding protein_coding MGP_129S1SvImJ_T0051556.1 MGP_129S1SvImJ_G0025051.1 mouse_genomes_project 19 32797711 32806190 + MGP_129S1SvImJ_P0051556 Lipn protein_coding protein_coding MGP_129S1SvImJ_T0051557.1 MGP_129S1SvImJ_G0025051.1 mouse_genomes_project 19 32797862 32815129 + MGP_129S1SvImJ_P0051557 Lipn protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051234.1 MGP_129S1SvImJ_G0024912.1 mouse_genomes_project 19 10177474 10203186 + MGP_129S1SvImJ_P0051234 Keg1 protein_coding protein_coding MGP_129S1SvImJ_T0051235.1 MGP_129S1SvImJ_G0024912.1 mouse_genomes_project 19 10177475 10199331 + Keg1 protein_coding processed_transcript MGP_129S1SvImJ_T0051236.1 MGP_129S1SvImJ_G0024912.1 mouse_genomes_project 19 10177481 10201848 + Keg1 protein_coding retained_intron MGP_129S1SvImJ_T0051237.1 MGP_129S1SvImJ_G0024912.1 mouse_genomes_project 19 10177481 10202291 + MGP_129S1SvImJ_P0051237 Keg1 protein_coding protein_coding MGP_129S1SvImJ_T0051238.1 MGP_129S1SvImJ_G0024912.1 mouse_genomes_project 19 10177492 10198115 + Keg1 protein_coding retained_intron MGP_129S1SvImJ_T0051239.1 MGP_129S1SvImJ_G0024912.1 mouse_genomes_project 19 10177502 10198037 + Keg1 protein_coding retained_intron MGP_129S1SvImJ_T0051240.1 MGP_129S1SvImJ_G0024912.1 mouse_genomes_project 19 10177502 10202401 + MGP_129S1SvImJ_P0051240 Keg1 protein_coding protein_coding MGP_129S1SvImJ_T0050333.1 MGP_129S1SvImJ_G0024631.1 mouse_genomes_project 19 702942 711543 - Tcirg1 protein_coding retained_intron MGP_129S1SvImJ_T0050334.1 MGP_129S1SvImJ_G0024631.1 mouse_genomes_project 19 702942 713702 - MGP_129S1SvImJ_P0050334 Tcirg1 protein_coding protein_coding MGP_129S1SvImJ_T0050335.1 MGP_129S1SvImJ_G0024631.1 mouse_genomes_project 19 702942 715605 - MGP_129S1SvImJ_P0050335 Tcirg1 protein_coding protein_coding MGP_129S1SvImJ_T0050336.1 MGP_129S1SvImJ_G0024631.1 mouse_genomes_project 19 702942 715463 - MGP_129S1SvImJ_P0050336 Tcirg1 protein_coding protein_coding MGP_129S1SvImJ_T0050337.1 MGP_129S1SvImJ_G0024631.1 mouse_genomes_project 19 702942 715584 - MGP_129S1SvImJ_P0050337 Tcirg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050338.1 MGP_129S1SvImJ_G0024631.1 mouse_genomes_project 19 703162 710494 - MGP_129S1SvImJ_P0050338 Tcirg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050339.1 MGP_129S1SvImJ_G0024631.1 mouse_genomes_project 19 703292 704123 - Tcirg1 protein_coding retained_intron MGP_129S1SvImJ_T0050340.1 MGP_129S1SvImJ_G0024631.1 mouse_genomes_project 19 703963 704724 - Tcirg1 protein_coding retained_intron MGP_129S1SvImJ_T0050341.1 MGP_129S1SvImJ_G0024631.1 mouse_genomes_project 19 705099 705780 - Tcirg1 protein_coding retained_intron MGP_129S1SvImJ_T0050342.1 MGP_129S1SvImJ_G0024631.1 mouse_genomes_project 19 705662 711826 - MGP_129S1SvImJ_P0050342 Tcirg1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050343.1 MGP_129S1SvImJ_G0024631.1 mouse_genomes_project 19 710713 711717 - Tcirg1 protein_coding retained_intron MGP_129S1SvImJ_T0050344.1 MGP_129S1SvImJ_G0024631.1 mouse_genomes_project 19 710964 715512 - Tcirg1 protein_coding retained_intron MGP_129S1SvImJ_T0050345.1 MGP_129S1SvImJ_G0024631.1 mouse_genomes_project 19 711164 712892 - Tcirg1 protein_coding retained_intron MGP_129S1SvImJ_T0051287.1 MGP_129S1SvImJ_G0024956.1 mouse_genomes_project 19 13603465 13625201 - MGP_129S1SvImJ_P0051287 Psat1 protein_coding protein_coding MGP_129S1SvImJ_T0051288.1 MGP_129S1SvImJ_G0024956.1 mouse_genomes_project 19 13603914 13624764 - MGP_129S1SvImJ_P0051288 Psat1 protein_coding protein_coding MGP_129S1SvImJ_T0051289.1 MGP_129S1SvImJ_G0024956.1 mouse_genomes_project 19 13603917 13608500 - Psat1 protein_coding retained_intron MGP_129S1SvImJ_T0051290.1 MGP_129S1SvImJ_G0024956.1 mouse_genomes_project 19 13613796 13648919 - MGP_129S1SvImJ_P0051290 Psat1 protein_coding protein_coding MGP_129S1SvImJ_T0051291.1 MGP_129S1SvImJ_G0024956.1 mouse_genomes_project 19 13617021 13618520 - Psat1 protein_coding processed_transcript MGP_129S1SvImJ_T0051292.1 MGP_129S1SvImJ_G0024956.1 mouse_genomes_project 19 13618585 13621558 - Psat1 protein_coding retained_intron MGP_129S1SvImJ_T0051293.1 MGP_129S1SvImJ_G0024956.1 mouse_genomes_project 19 13620648 13625072 - Psat1 protein_coding retained_intron MGP_129S1SvImJ_T0100886.1 MGP_129S1SvImJ_G0038953.1 mouse_genomes_project 19 5993300 5993376 + Gm24453 snoRNA snoRNA MGP_129S1SvImJ_T0051790.1 MGP_129S1SvImJ_G0025134.1 mouse_genomes_project 19 41287514 41346426 + MGP_129S1SvImJ_P0051790 Ubtd1 protein_coding protein_coding MGP_129S1SvImJ_T0050671.1 MGP_129S1SvImJ_G0024739.1 mouse_genomes_project 19 3087107 3088744 + MGP_129S1SvImJ_P0050671 protein_coding protein_coding MGP_129S1SvImJ_T0050672.1 MGP_129S1SvImJ_G0024739.1 mouse_genomes_project 19 3087107 3088744 + MGP_129S1SvImJ_P0050672 protein_coding protein_coding MGP_129S1SvImJ_T0050674.1 MGP_129S1SvImJ_G0024739.1 mouse_genomes_project 19 3087186 3088744 + MGP_129S1SvImJ_P0050674 protein_coding protein_coding MGP_129S1SvImJ_T0013381.1 MGP_129S1SvImJ_G0011470.1 mouse_genomes_project 19 8472380 8473937 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0050426.1 MGP_129S1SvImJ_G0024655.1 mouse_genomes_project 19 1034782 1039645 + MGP_129S1SvImJ_P0050426 Ppp1ca protein_coding protein_coding MGP_129S1SvImJ_T0011506.1 MGP_129S1SvImJ_G0009622.1 mouse_genomes_project 19 59275082 59275166 - Gm22561 misc_RNA misc_RNA MGP_129S1SvImJ_T0051549.1 MGP_129S1SvImJ_G0025047.1 mouse_genomes_project 19 32172536 32256021 - MGP_129S1SvImJ_P0051549 protein_coding protein_coding MGP_129S1SvImJ_T0050471.1 MGP_129S1SvImJ_G0024665.1 mouse_genomes_project 19 1374011 1375805 - MGP_129S1SvImJ_P0050471 2010003K11Rik protein_coding protein_coding MGP_129S1SvImJ_T0050600.1 MGP_129S1SvImJ_G0024716.1 mouse_genomes_project 19 2542313 2545501 + MGP_129S1SvImJ_P0050600 Ap5b1 protein_coding protein_coding MGP_129S1SvImJ_T0051037.1 MGP_129S1SvImJ_G0024821.1 mouse_genomes_project 19 6183256 6204146 + MGP_129S1SvImJ_P0051037 Ganab protein_coding protein_coding MGP_129S1SvImJ_T0051038.1 MGP_129S1SvImJ_G0024821.1 mouse_genomes_project 19 6183288 6204152 + MGP_129S1SvImJ_P0051038 Ganab protein_coding unknown_likely_coding MGP_129S1SvImJ_T0013409.1 MGP_129S1SvImJ_G0011498.1 mouse_genomes_project 19 51845955 51846333 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0051216.1 MGP_129S1SvImJ_G0024901.1 mouse_genomes_project 19 9755622 9759757 + MGP_129S1SvImJ_P0051216 Olfr1434 protein_coding protein_coding MGP_129S1SvImJ_T0010343.1 MGP_129S1SvImJ_G0008459.1 mouse_genomes_project 19 59404753 59404840 - Mir3086 miRNA miRNA MGP_129S1SvImJ_T0051585.1 MGP_129S1SvImJ_G0025067.1 mouse_genomes_project 19 33702330 33761723 + MGP_129S1SvImJ_P0051585 Kif20b protein_coding protein_coding MGP_129S1SvImJ_T0010334.1 MGP_129S1SvImJ_G0008450.1 mouse_genomes_project 19 46024969 46025078 + Mir146b miRNA miRNA MGP_129S1SvImJ_T0051202.1 MGP_129S1SvImJ_G0024887.1 mouse_genomes_project 19 9268068 9269228 - MGP_129S1SvImJ_P0051202 Olfr1419 protein_coding protein_coding MGP_129S1SvImJ_T0050355.1 MGP_129S1SvImJ_G0024637.1 mouse_genomes_project 19 811435 818195 + MGP_129S1SvImJ_P0050355 Tbx10 protein_coding protein_coding MGP_129S1SvImJ_T0051396.1 MGP_129S1SvImJ_G0025003.1 mouse_genomes_project 19 23921416 23934660 + MGP_129S1SvImJ_P0051396 Dmrt3 protein_coding protein_coding MGP_129S1SvImJ_T0051056.1 MGP_129S1SvImJ_G0024828.1 mouse_genomes_project 19 6277874 6373127 + MGP_129S1SvImJ_P0051056 Ahnak protein_coding protein_coding MGP_129S1SvImJ_T0051057.1 MGP_129S1SvImJ_G0024828.1 mouse_genomes_project 19 6291219 6305922 + MGP_129S1SvImJ_P0051057 Ahnak protein_coding protein_coding MGP_129S1SvImJ_T0050538.1 MGP_129S1SvImJ_G0024694.1 mouse_genomes_project 19 2034786 2047625 - MGP_129S1SvImJ_P0050538 Klc2 protein_coding protein_coding MGP_129S1SvImJ_T0050539.1 MGP_129S1SvImJ_G0024694.1 mouse_genomes_project 19 2034786 2047365 - MGP_129S1SvImJ_P0050539 Klc2 protein_coding protein_coding MGP_129S1SvImJ_T0050540.1 MGP_129S1SvImJ_G0024694.1 mouse_genomes_project 19 2034786 2047362 - MGP_129S1SvImJ_P0050540 Klc2 protein_coding protein_coding MGP_129S1SvImJ_T0050541.1 MGP_129S1SvImJ_G0024694.1 mouse_genomes_project 19 2034788 2047363 - MGP_129S1SvImJ_P0050541 Klc2 protein_coding protein_coding MGP_129S1SvImJ_T0050542.1 MGP_129S1SvImJ_G0024694.1 mouse_genomes_project 19 2035252 2036564 - Klc2 protein_coding retained_intron MGP_129S1SvImJ_T0050543.1 MGP_129S1SvImJ_G0024694.1 mouse_genomes_project 19 2036510 2038529 - Klc2 protein_coding retained_intron MGP_129S1SvImJ_T0050544.1 MGP_129S1SvImJ_G0024694.1 mouse_genomes_project 19 2037450 2039068 - Klc2 protein_coding retained_intron MGP_129S1SvImJ_T0050545.1 MGP_129S1SvImJ_G0024694.1 mouse_genomes_project 19 2040593 2041094 - Klc2 protein_coding retained_intron MGP_129S1SvImJ_T0050546.1 MGP_129S1SvImJ_G0024694.1 mouse_genomes_project 19 2040893 2046651 - MGP_129S1SvImJ_P0050546 Klc2 protein_coding protein_coding MGP_129S1SvImJ_T0052049.1 MGP_129S1SvImJ_G0025220.1 mouse_genomes_project 19 46805697 46826131 - MGP_129S1SvImJ_P0052049 Pcgf6 protein_coding protein_coding MGP_129S1SvImJ_T0051877.1 MGP_129S1SvImJ_G0025163.1 mouse_genomes_project 19 43525346 43559719 - MGP_129S1SvImJ_P0051877 Chuk protein_coding protein_coding MGP_129S1SvImJ_T0051878.1 MGP_129S1SvImJ_G0025163.1 mouse_genomes_project 19 43525347 43559716 - MGP_129S1SvImJ_P0051878 Chuk protein_coding protein_coding MGP_129S1SvImJ_T0051879.1 MGP_129S1SvImJ_G0025163.1 mouse_genomes_project 19 43526384 43527916 - Chuk protein_coding retained_intron MGP_129S1SvImJ_T0051880.1 MGP_129S1SvImJ_G0025163.1 mouse_genomes_project 19 43528949 43531611 - Chuk protein_coding retained_intron MGP_129S1SvImJ_T0051881.1 MGP_129S1SvImJ_G0025163.1 mouse_genomes_project 19 43529829 43536984 - Chuk protein_coding retained_intron MGP_129S1SvImJ_T0051882.1 MGP_129S1SvImJ_G0025163.1 mouse_genomes_project 19 43530861 43531858 - Chuk protein_coding retained_intron MGP_129S1SvImJ_T0051883.1 MGP_129S1SvImJ_G0025163.1 mouse_genomes_project 19 43534025 43559708 - Chuk protein_coding retained_intron MGP_129S1SvImJ_T0051884.1 MGP_129S1SvImJ_G0025163.1 mouse_genomes_project 19 43549612 43559521 - Chuk protein_coding retained_intron MGP_129S1SvImJ_T0050848.1 MGP_129S1SvImJ_G0024767.1 mouse_genomes_project 19 3930078 3943667 - MGP_129S1SvImJ_P0050848 Ccdc88b protein_coding protein_coding MGP_129S1SvImJ_T0051705.1 MGP_129S1SvImJ_G0025110.1 mouse_genomes_project 19 39419720 39473521 - MGP_129S1SvImJ_P0051705 Pdlim1 protein_coding protein_coding MGP_129S1SvImJ_T0051706.1 MGP_129S1SvImJ_G0025110.1 mouse_genomes_project 19 39420910 39421904 - Pdlim1 protein_coding retained_intron MGP_129S1SvImJ_T0051707.1 MGP_129S1SvImJ_G0025110.1 mouse_genomes_project 19 39421070 39429346 - Pdlim1 protein_coding retained_intron MGP_129S1SvImJ_T0051708.1 MGP_129S1SvImJ_G0025110.1 mouse_genomes_project 19 39429132 39473747 - MGP_129S1SvImJ_P0051708 Pdlim1 protein_coding protein_coding MGP_129S1SvImJ_T0051709.1 MGP_129S1SvImJ_G0025110.1 mouse_genomes_project 19 39449114 39473521 - Pdlim1 protein_coding retained_intron MGP_129S1SvImJ_T0052021.1 MGP_129S1SvImJ_G0025209.1 mouse_genomes_project 19 46085293 46183195 + MGP_129S1SvImJ_P0052021 Sufu protein_coding protein_coding MGP_129S1SvImJ_T0052022.1 MGP_129S1SvImJ_G0025209.1 mouse_genomes_project 19 46085315 46180440 + MGP_129S1SvImJ_P0052022 Sufu protein_coding protein_coding MGP_129S1SvImJ_T0052023.1 MGP_129S1SvImJ_G0025209.1 mouse_genomes_project 19 46085401 46149999 + MGP_129S1SvImJ_P0052023 Sufu protein_coding protein_coding MGP_129S1SvImJ_T0052024.1 MGP_129S1SvImJ_G0025209.1 mouse_genomes_project 19 46085423 46171322 + MGP_129S1SvImJ_P0052024 Sufu protein_coding protein_coding MGP_129S1SvImJ_T0052025.1 MGP_129S1SvImJ_G0025209.1 mouse_genomes_project 19 46152197 46170023 + Sufu protein_coding processed_transcript MGP_129S1SvImJ_T0052026.1 MGP_129S1SvImJ_G0025209.1 mouse_genomes_project 19 46177482 46180374 + Sufu protein_coding retained_intron MGP_129S1SvImJ_T0051233.1 MGP_129S1SvImJ_G0024911.1 mouse_genomes_project 19 10159323 10165001 + MGP_129S1SvImJ_P0051233 Olfr1443 protein_coding protein_coding MGP_129S1SvImJ_T0051132.1 MGP_129S1SvImJ_G0024861.1 mouse_genomes_project 19 8272730 8283032 + MGP_129S1SvImJ_P0051132 Prpf19 protein_coding protein_coding MGP_129S1SvImJ_T0051133.1 MGP_129S1SvImJ_G0024861.1 mouse_genomes_project 19 8272776 8275411 + Prpf19 protein_coding retained_intron MGP_129S1SvImJ_T0051134.1 MGP_129S1SvImJ_G0024861.1 mouse_genomes_project 19 8272781 8275760 + Prpf19 protein_coding retained_intron MGP_129S1SvImJ_T0051135.1 MGP_129S1SvImJ_G0024861.1 mouse_genomes_project 19 8272872 8276867 + Prpf19 protein_coding retained_intron MGP_129S1SvImJ_T0051136.1 MGP_129S1SvImJ_G0024861.1 mouse_genomes_project 19 8272913 8288930 + MGP_129S1SvImJ_P0051136 Prpf19 protein_coding protein_coding MGP_129S1SvImJ_T0051137.1 MGP_129S1SvImJ_G0024861.1 mouse_genomes_project 19 8276144 8283006 + Prpf19 protein_coding processed_transcript MGP_129S1SvImJ_T0051138.1 MGP_129S1SvImJ_G0024861.1 mouse_genomes_project 19 8276868 8280260 + Prpf19 protein_coding retained_intron MGP_129S1SvImJ_T0051139.1 MGP_129S1SvImJ_G0024861.1 mouse_genomes_project 19 8277781 8278493 + Prpf19 protein_coding retained_intron MGP_129S1SvImJ_T0050626.1 MGP_129S1SvImJ_G0024724.1 mouse_genomes_project 19 2691784 2712167 - MGP_129S1SvImJ_P0050626 Ehbp1l1 protein_coding protein_coding MGP_129S1SvImJ_T0050627.1 MGP_129S1SvImJ_G0024724.1 mouse_genomes_project 19 2691784 2712167 - MGP_129S1SvImJ_P0050627 Ehbp1l1 protein_coding protein_coding MGP_129S1SvImJ_T0051851.1 MGP_129S1SvImJ_G0025157.1 mouse_genomes_project 19 43173551 43193071 + MGP_129S1SvImJ_P0051851 Cutc protein_coding protein_coding MGP_129S1SvImJ_T0051852.1 MGP_129S1SvImJ_G0025157.1 mouse_genomes_project 19 43173653 43193078 + MGP_129S1SvImJ_P0051852 Cutc protein_coding protein_coding MGP_129S1SvImJ_T0051853.1 MGP_129S1SvImJ_G0025157.1 mouse_genomes_project 19 43173692 43192678 + MGP_129S1SvImJ_P0051853 Cutc protein_coding protein_coding MGP_129S1SvImJ_T0051854.1 MGP_129S1SvImJ_G0025157.1 mouse_genomes_project 19 43189312 43193078 + Cutc protein_coding retained_intron MGP_129S1SvImJ_T0052256.1 MGP_129S1SvImJ_G0025282.1 mouse_genomes_project 19 59284126 59349616 - MGP_129S1SvImJ_P0052256 Hspa12a protein_coding protein_coding MGP_129S1SvImJ_T0099636.1 MGP_129S1SvImJ_G0037703.1 mouse_genomes_project 19 23746744 23746848 - Gm26207 snRNA snRNA MGP_129S1SvImJ_T0013397.1 MGP_129S1SvImJ_G0011486.1 mouse_genomes_project 19 27161730 27162123 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0051219.1 MGP_129S1SvImJ_G0024904.1 mouse_genomes_project 19 9894470 9898676 + MGP_129S1SvImJ_P0051219 Pfpl protein_coding protein_coding MGP_129S1SvImJ_T0051277.1 MGP_129S1SvImJ_G0024947.1 mouse_genomes_project 19 11335113 11336180 + MGP_129S1SvImJ_P0051277 Olfr1496 protein_coding protein_coding MGP_129S1SvImJ_T0051212.1 MGP_129S1SvImJ_G0024897.1 mouse_genomes_project 19 9559573 9560621 - MGP_129S1SvImJ_P0051212 Olfr76 protein_coding protein_coding MGP_129S1SvImJ_T0050477.1 MGP_129S1SvImJ_G0024668.1 mouse_genomes_project 19 1509738 1512805 - MGP_129S1SvImJ_P0050477 Rce1 protein_coding protein_coding MGP_129S1SvImJ_T0013402.1 MGP_129S1SvImJ_G0011491.1 mouse_genomes_project 19 28659444 28659822 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0051767.1 MGP_129S1SvImJ_G0025130.1 mouse_genomes_project 19 41216043 41222004 + MGP_129S1SvImJ_P0051767 Pgam1 protein_coding protein_coding MGP_129S1SvImJ_T0051377.1 MGP_129S1SvImJ_G0024994.1 mouse_genomes_project 19 22516865 22674429 - MGP_129S1SvImJ_P0051377 Pip5k1b protein_coding protein_coding MGP_129S1SvImJ_T0051378.1 MGP_129S1SvImJ_G0024994.1 mouse_genomes_project 19 22622707 22795155 - Pip5k1b protein_coding retained_intron MGP_129S1SvImJ_T0051379.1 MGP_129S1SvImJ_G0024994.1 mouse_genomes_project 19 22663838 22795106 - Pip5k1b protein_coding processed_transcript MGP_129S1SvImJ_T0051756.1 MGP_129S1SvImJ_G0025126.1 mouse_genomes_project 19 40876001 41030348 - MGP_129S1SvImJ_P0051756 Slit1 protein_coding protein_coding MGP_129S1SvImJ_T0051757.1 MGP_129S1SvImJ_G0025126.1 mouse_genomes_project 19 40876003 41030521 - MGP_129S1SvImJ_P0051757 Slit1 protein_coding protein_coding MGP_129S1SvImJ_T0051758.1 MGP_129S1SvImJ_G0025126.1 mouse_genomes_project 19 40876195 41030348 - MGP_129S1SvImJ_P0051758 Slit1 protein_coding protein_coding MGP_129S1SvImJ_T0051759.1 MGP_129S1SvImJ_G0025126.1 mouse_genomes_project 19 40879956 40883960 - Slit1 protein_coding retained_intron MGP_129S1SvImJ_T0051760.1 MGP_129S1SvImJ_G0025126.1 mouse_genomes_project 19 40928999 41030342 - MGP_129S1SvImJ_P0051760 Slit1 protein_coding protein_coding MGP_129S1SvImJ_T0051064.1 MGP_129S1SvImJ_G0024834.1 mouse_genomes_project 19 7291447 7307637 - MGP_129S1SvImJ_P0051064 Best1 protein_coding protein_coding MGP_129S1SvImJ_T0051065.1 MGP_129S1SvImJ_G0024834.1 mouse_genomes_project 19 7296821 7299189 - Best1 protein_coding processed_transcript MGP_129S1SvImJ_T0051689.1 MGP_129S1SvImJ_G0025101.1 mouse_genomes_project 19 38513673 38572261 - MGP_129S1SvImJ_P0051689 Cyp2c38 protein_coding protein_coding MGP_129S1SvImJ_T0003893.1 MGP_129S1SvImJ_G0003483.1 mouse_genomes_project 19 44706384 44711499 - Tlx1os antisense antisense MGP_129S1SvImJ_T0050929.1 MGP_129S1SvImJ_G0024793.1 mouse_genomes_project 19 4633411 4685694 + MGP_129S1SvImJ_P0050929 Atl3 protein_coding protein_coding MGP_129S1SvImJ_T0050930.1 MGP_129S1SvImJ_G0024793.1 mouse_genomes_project 19 4633809 4685694 + MGP_129S1SvImJ_P0050930 Atl3 protein_coding protein_coding MGP_129S1SvImJ_T0051801.1 MGP_129S1SvImJ_G0025141.1 mouse_genomes_project 19 41470256 41474568 + MGP_129S1SvImJ_P0051801 Marveld1 protein_coding protein_coding MGP_129S1SvImJ_T0051802.1 MGP_129S1SvImJ_G0025141.1 mouse_genomes_project 19 41470573 41474327 + MGP_129S1SvImJ_P0051802 Marveld1 protein_coding protein_coding MGP_129S1SvImJ_T0051264.1 MGP_129S1SvImJ_G0024934.1 mouse_genomes_project 19 10874720 10875647 + MGP_129S1SvImJ_P0051264 Olfr1467 protein_coding protein_coding MGP_129S1SvImJ_T0050482.1 MGP_129S1SvImJ_G0024671.1 mouse_genomes_project 19 1636703 1708799 - MGP_129S1SvImJ_P0050482 Gm21992 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050490.1 MGP_129S1SvImJ_G0024671.1 mouse_genomes_project 19 1680239 1708695 - MGP_129S1SvImJ_P0050490 Gm21992 protein_coding protein_coding MGP_129S1SvImJ_T0050491.1 MGP_129S1SvImJ_G0024671.1 mouse_genomes_project 19 1680240 1708399 - MGP_129S1SvImJ_P0050491 Gm21992 protein_coding protein_coding MGP_129S1SvImJ_T0050494.1 MGP_129S1SvImJ_G0024671.1 mouse_genomes_project 19 1682456 1708695 - MGP_129S1SvImJ_P0050494 Gm21992 protein_coding protein_coding MGP_129S1SvImJ_T0050497.1 MGP_129S1SvImJ_G0024671.1 mouse_genomes_project 19 1686246 1708790 - Gm21992 protein_coding retained_intron MGP_129S1SvImJ_T0050498.1 MGP_129S1SvImJ_G0024671.1 mouse_genomes_project 19 1689210 1698547 - Gm21992 protein_coding processed_transcript MGP_129S1SvImJ_T0051426.1 MGP_129S1SvImJ_G0025008.1 mouse_genomes_project 19 25688181 25702747 + MGP_129S1SvImJ_P0051426 Kcnv2 protein_coding protein_coding MGP_129S1SvImJ_T0050844.1 MGP_129S1SvImJ_G0024765.1 mouse_genomes_project 19 3604924 3612099 - MGP_129S1SvImJ_P0050844 Slc22a12 protein_coding protein_coding MGP_129S1SvImJ_T0050845.1 MGP_129S1SvImJ_G0024765.1 mouse_genomes_project 19 3605144 3610629 - Slc22a12 protein_coding processed_transcript MGP_129S1SvImJ_T0050846.1 MGP_129S1SvImJ_G0024765.1 mouse_genomes_project 19 3606816 3611791 - MGP_129S1SvImJ_P0050846 Slc22a12 protein_coding protein_coding MGP_129S1SvImJ_T0051931.1 MGP_129S1SvImJ_G0025186.1 mouse_genomes_project 19 44793138 44796270 - MGP_129S1SvImJ_P0051931 Lbx1 protein_coding protein_coding MGP_129S1SvImJ_T0051247.1 MGP_129S1SvImJ_G0024917.1 mouse_genomes_project 19 10379825 10380826 + MGP_129S1SvImJ_P0051247 Olfr1445 protein_coding protein_coding MGP_129S1SvImJ_T0013389.1 MGP_129S1SvImJ_G0011478.1 mouse_genomes_project 19 14141233 14142020 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0051190.1 MGP_129S1SvImJ_G0024881.1 mouse_genomes_project 19 9039687 9052615 - MGP_129S1SvImJ_P0051190 Oosp2 protein_coding protein_coding MGP_129S1SvImJ_T0051191.1 MGP_129S1SvImJ_G0024881.1 mouse_genomes_project 19 9039688 9052658 - MGP_129S1SvImJ_P0051191 Oosp2 protein_coding protein_coding MGP_129S1SvImJ_T0051796.1 MGP_129S1SvImJ_G0025137.1 mouse_genomes_project 19 41364901 41366281 + MGP_129S1SvImJ_P0051796 4933411K16Rik protein_coding protein_coding MGP_129S1SvImJ_T0051583.1 MGP_129S1SvImJ_G0025066.1 mouse_genomes_project 19 33585876 33657573 - MGP_129S1SvImJ_P0051583 Pank1 protein_coding protein_coding MGP_129S1SvImJ_T0051584.1 MGP_129S1SvImJ_G0025066.1 mouse_genomes_project 19 33585877 33656035 - MGP_129S1SvImJ_P0051584 Pank1 protein_coding protein_coding MGP_129S1SvImJ_T0051211.1 MGP_129S1SvImJ_G0024896.1 mouse_genomes_project 19 9548950 9549895 - MGP_129S1SvImJ_P0051211 Olfr1428 protein_coding protein_coding MGP_129S1SvImJ_T0051058.1 MGP_129S1SvImJ_G0024829.1 mouse_genomes_project 19 6379743 6384066 - MGP_129S1SvImJ_P0051058 Scgb1a1 protein_coding protein_coding MGP_129S1SvImJ_T0051368.1 MGP_129S1SvImJ_G0024987.1 mouse_genomes_project 19 21846696 21849051 + MGP_129S1SvImJ_P0051368 Gm6563 protein_coding protein_coding MGP_129S1SvImJ_T0052017.1 MGP_129S1SvImJ_G0025207.1 mouse_genomes_project 19 46041572 46060739 + MGP_129S1SvImJ_P0052017 Mfsd13a protein_coding protein_coding MGP_129S1SvImJ_T0052018.1 MGP_129S1SvImJ_G0025207.1 mouse_genomes_project 19 46041652 46060729 + MGP_129S1SvImJ_P0052018 Mfsd13a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052019.1 MGP_129S1SvImJ_G0025207.1 mouse_genomes_project 19 46052171 46060729 + Mfsd13a protein_coding retained_intron MGP_129S1SvImJ_T0051892.1 MGP_129S1SvImJ_G0025168.1 mouse_genomes_project 19 43753475 43766660 + MGP_129S1SvImJ_P0051892 Scd2 protein_coding protein_coding MGP_129S1SvImJ_T0099648.1 MGP_129S1SvImJ_G0037715.1 mouse_genomes_project 19 51278651 51278758 - Gm25644 snRNA snRNA MGP_129S1SvImJ_T0052185.1 MGP_129S1SvImJ_G0025263.1 mouse_genomes_project 19 56742970 56790982 + MGP_129S1SvImJ_P0052185 Casp7 protein_coding protein_coding MGP_129S1SvImJ_T0051742.1 MGP_129S1SvImJ_G0025117.1 mouse_genomes_project 19 40178963 40246742 - MGP_129S1SvImJ_P0051742 Blnk protein_coding protein_coding MGP_129S1SvImJ_T0051743.1 MGP_129S1SvImJ_G0025117.1 mouse_genomes_project 19 40178963 40246355 - MGP_129S1SvImJ_P0051743 Blnk protein_coding protein_coding MGP_129S1SvImJ_T0051744.1 MGP_129S1SvImJ_G0025117.1 mouse_genomes_project 19 40215866 40246742 - Blnk protein_coding retained_intron MGP_129S1SvImJ_T0051012.1 MGP_129S1SvImJ_G0024814.1 mouse_genomes_project 19 6120480 6131621 + MGP_129S1SvImJ_P0051012 Bscl2 protein_coding protein_coding MGP_129S1SvImJ_T0051013.1 MGP_129S1SvImJ_G0024814.1 mouse_genomes_project 19 6120700 6123257 + Bscl2 protein_coding processed_transcript MGP_129S1SvImJ_T0051014.1 MGP_129S1SvImJ_G0024814.1 mouse_genomes_project 19 6120742 6131605 + MGP_129S1SvImJ_P0051014 Bscl2 protein_coding protein_coding MGP_129S1SvImJ_T0051015.1 MGP_129S1SvImJ_G0024814.1 mouse_genomes_project 19 6122341 6131604 + MGP_129S1SvImJ_P0051015 Bscl2 protein_coding protein_coding MGP_129S1SvImJ_T0051016.1 MGP_129S1SvImJ_G0024814.1 mouse_genomes_project 19 6122386 6131605 + Bscl2 protein_coding retained_intron MGP_129S1SvImJ_T0051017.1 MGP_129S1SvImJ_G0024814.1 mouse_genomes_project 19 6122403 6131576 + MGP_129S1SvImJ_P0051017 Bscl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051018.1 MGP_129S1SvImJ_G0024814.1 mouse_genomes_project 19 6123532 6131604 + MGP_129S1SvImJ_P0051018 Bscl2 protein_coding protein_coding MGP_129S1SvImJ_T0051019.1 MGP_129S1SvImJ_G0024814.1 mouse_genomes_project 19 6123548 6131604 + Bscl2 protein_coding retained_intron MGP_129S1SvImJ_T0051020.1 MGP_129S1SvImJ_G0024814.1 mouse_genomes_project 19 6123548 6131604 + Bscl2 protein_coding retained_intron MGP_129S1SvImJ_T0051021.1 MGP_129S1SvImJ_G0024814.1 mouse_genomes_project 19 6129203 6131561 + MGP_129S1SvImJ_P0051021 Bscl2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050919.1 MGP_129S1SvImJ_G0024791.1 mouse_genomes_project 19 4554257 4562537 + MGP_129S1SvImJ_P0050919 2700081O15Rik protein_coding protein_coding MGP_129S1SvImJ_T0050920.1 MGP_129S1SvImJ_G0024791.1 mouse_genomes_project 19 4555349 4557721 + 2700081O15Rik protein_coding retained_intron MGP_129S1SvImJ_T0050921.1 MGP_129S1SvImJ_G0024791.1 mouse_genomes_project 19 4556722 4559971 + MGP_129S1SvImJ_P0050921 2700081O15Rik protein_coding protein_coding MGP_129S1SvImJ_T0050922.1 MGP_129S1SvImJ_G0024791.1 mouse_genomes_project 19 4557041 4559305 + MGP_129S1SvImJ_P0050922 2700081O15Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050923.1 MGP_129S1SvImJ_G0024791.1 mouse_genomes_project 19 4557051 4558957 + MGP_129S1SvImJ_P0050923 2700081O15Rik protein_coding protein_coding MGP_129S1SvImJ_T0050924.1 MGP_129S1SvImJ_G0024791.1 mouse_genomes_project 19 4557660 4562173 + 2700081O15Rik protein_coding retained_intron MGP_129S1SvImJ_T0003875.1 MGP_129S1SvImJ_G0003471.1 mouse_genomes_project 19 4422190 4429061 + Gm17227 antisense antisense MGP_129S1SvImJ_T0003876.1 MGP_129S1SvImJ_G0003471.1 mouse_genomes_project 19 4422266 4428883 + Gm17227 antisense antisense MGP_129S1SvImJ_T0051727.1 MGP_129S1SvImJ_G0025114.1 mouse_genomes_project 19 39828418 39830195 + Entpd1 protein_coding processed_transcript MGP_129S1SvImJ_T0051728.1 MGP_129S1SvImJ_G0025114.1 mouse_genomes_project 19 39828441 39831768 + Entpd1 protein_coding processed_transcript MGP_129S1SvImJ_T0051729.1 MGP_129S1SvImJ_G0025114.1 mouse_genomes_project 19 39828449 39975434 + MGP_129S1SvImJ_P0051729 Entpd1 protein_coding protein_coding MGP_129S1SvImJ_T0051730.1 MGP_129S1SvImJ_G0025114.1 mouse_genomes_project 19 39881819 39977242 + MGP_129S1SvImJ_P0051730 Entpd1 protein_coding protein_coding MGP_129S1SvImJ_T0051731.1 MGP_129S1SvImJ_G0025114.1 mouse_genomes_project 19 39881848 39958321 + MGP_129S1SvImJ_P0051731 Entpd1 protein_coding protein_coding MGP_129S1SvImJ_T0051732.1 MGP_129S1SvImJ_G0025114.1 mouse_genomes_project 19 39881893 39974723 + MGP_129S1SvImJ_P0051732 Entpd1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051733.1 MGP_129S1SvImJ_G0025114.1 mouse_genomes_project 19 39882248 39939386 + Entpd1 protein_coding processed_transcript MGP_129S1SvImJ_T0051734.1 MGP_129S1SvImJ_G0025114.1 mouse_genomes_project 19 39882542 39956404 + Entpd1 protein_coding processed_transcript MGP_129S1SvImJ_T0051735.1 MGP_129S1SvImJ_G0025114.1 mouse_genomes_project 19 39905705 39956500 + Entpd1 protein_coding processed_transcript MGP_129S1SvImJ_T0051736.1 MGP_129S1SvImJ_G0025114.1 mouse_genomes_project 19 39959344 39975395 + MGP_129S1SvImJ_P0051736 Entpd1 protein_coding protein_coding MGP_129S1SvImJ_T0051737.1 MGP_129S1SvImJ_G0025114.1 mouse_genomes_project 19 39971823 39972505 + Entpd1 protein_coding processed_transcript MGP_129S1SvImJ_T0007121.1 MGP_129S1SvImJ_G0005846.1 mouse_genomes_project 19 57735745 57783761 - B230217O12Rik lincRNA lincRNA MGP_129S1SvImJ_T0011495.1 MGP_129S1SvImJ_G0009611.1 mouse_genomes_project 19 5947270 5947599 - Gm22820 misc_RNA misc_RNA MGP_129S1SvImJ_T0010304.1 MGP_129S1SvImJ_G0008420.1 mouse_genomes_project 19 3915341 3915400 - Mir5046 miRNA miRNA MGP_129S1SvImJ_T0051579.1 MGP_129S1SvImJ_G0025063.1 mouse_genomes_project 19 33372731 33389079 - MGP_129S1SvImJ_P0051579 Ifit1bl2 protein_coding protein_coding MGP_129S1SvImJ_T0051580.1 MGP_129S1SvImJ_G0025063.1 mouse_genomes_project 19 33372733 33399934 - MGP_129S1SvImJ_P0051580 Ifit1bl2 protein_coding protein_coding MGP_129S1SvImJ_T0010302.1 MGP_129S1SvImJ_G0008418.1 mouse_genomes_project 19 3395777 3395842 + Mir6989 miRNA miRNA MGP_129S1SvImJ_T0010331.1 MGP_129S1SvImJ_G0008447.1 mouse_genomes_project 19 43030602 43030717 + Gm22646 miRNA miRNA MGP_129S1SvImJ_T0051597.1 MGP_129S1SvImJ_G0025072.1 mouse_genomes_project 19 35440971 35511547 + MGP_129S1SvImJ_P0051597 Hectd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051598.1 MGP_129S1SvImJ_G0025072.1 mouse_genomes_project 19 35441000 35510657 + MGP_129S1SvImJ_P0051598 Hectd2 protein_coding protein_coding MGP_129S1SvImJ_T0051599.1 MGP_129S1SvImJ_G0025072.1 mouse_genomes_project 19 35441001 35481168 + Hectd2 protein_coding retained_intron MGP_129S1SvImJ_T0051600.1 MGP_129S1SvImJ_G0025072.1 mouse_genomes_project 19 35441001 35511550 + MGP_129S1SvImJ_P0051600 Hectd2 protein_coding protein_coding MGP_129S1SvImJ_T0051601.1 MGP_129S1SvImJ_G0025072.1 mouse_genomes_project 19 35441010 35487402 + Hectd2 protein_coding retained_intron MGP_129S1SvImJ_T0051602.1 MGP_129S1SvImJ_G0025072.1 mouse_genomes_project 19 35441167 35457331 + Hectd2 protein_coding retained_intron MGP_129S1SvImJ_T0051603.1 MGP_129S1SvImJ_G0025072.1 mouse_genomes_project 19 35441198 35509259 + MGP_129S1SvImJ_P0051603 Hectd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051604.1 MGP_129S1SvImJ_G0025072.1 mouse_genomes_project 19 35475509 35509259 + MGP_129S1SvImJ_P0051604 Hectd2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051605.1 MGP_129S1SvImJ_G0025072.1 mouse_genomes_project 19 35495187 35502449 + Hectd2 protein_coding retained_intron MGP_129S1SvImJ_T0050529.1 MGP_129S1SvImJ_G0024689.1 mouse_genomes_project 19 1995735 1998295 + MGP_129S1SvImJ_P0050529 Cd248 protein_coding protein_coding MGP_129S1SvImJ_T0051675.1 MGP_129S1SvImJ_G0025095.1 mouse_genomes_project 19 37925210 38017440 + MGP_129S1SvImJ_P0051675 Tbc1d12 protein_coding protein_coding MGP_129S1SvImJ_T0050946.1 MGP_129S1SvImJ_G0024799.1 mouse_genomes_project 19 5393277 5394608 - protein_coding processed_transcript MGP_129S1SvImJ_T0050853.1 MGP_129S1SvImJ_G0024769.1 mouse_genomes_project 19 3999444 4000795 + MGP_129S1SvImJ_P0050853 Trmt112 protein_coding protein_coding MGP_129S1SvImJ_T0050854.1 MGP_129S1SvImJ_G0024769.1 mouse_genomes_project 19 3999493 4000774 + MGP_129S1SvImJ_P0050854 Trmt112 protein_coding protein_coding MGP_129S1SvImJ_T0050855.1 MGP_129S1SvImJ_G0024769.1 mouse_genomes_project 19 3999899 4000580 + Trmt112 protein_coding retained_intron MGP_129S1SvImJ_T0050856.1 MGP_129S1SvImJ_G0024769.1 mouse_genomes_project 19 3999910 4000774 + MGP_129S1SvImJ_P0050856 Trmt112 protein_coding protein_coding MGP_129S1SvImJ_T0010306.1 MGP_129S1SvImJ_G0008422.1 mouse_genomes_project 19 4559205 4559275 + Mir6991 miRNA miRNA MGP_129S1SvImJ_T0010305.1 MGP_129S1SvImJ_G0008421.1 mouse_genomes_project 19 4003941 4004032 - Mir6990 miRNA miRNA MGP_129S1SvImJ_T0051952.1 MGP_129S1SvImJ_G0025192.1 mouse_genomes_project 19 45368799 45372329 - MGP_129S1SvImJ_P0051952 Npm3 protein_coding protein_coding MGP_129S1SvImJ_T0051953.1 MGP_129S1SvImJ_G0025192.1 mouse_genomes_project 19 45371280 45372287 - Npm3 protein_coding retained_intron MGP_129S1SvImJ_T0003891.1 MGP_129S1SvImJ_G0003481.1 mouse_genomes_project 19 44295509 44306238 - Gm20395 antisense antisense MGP_129S1SvImJ_T0050499.1 MGP_129S1SvImJ_G0024674.1 mouse_genomes_project 19 1697113 1708821 - MGP_129S1SvImJ_P0050499 Rbm14 protein_coding protein_coding MGP_129S1SvImJ_T0050500.1 MGP_129S1SvImJ_G0024674.1 mouse_genomes_project 19 1697466 1708772 - MGP_129S1SvImJ_P0050500 Rbm14 protein_coding protein_coding MGP_129S1SvImJ_T0050501.1 MGP_129S1SvImJ_G0024674.1 mouse_genomes_project 19 1698321 1708699 - MGP_129S1SvImJ_P0050501 Rbm14 protein_coding protein_coding MGP_129S1SvImJ_T0050638.1 MGP_129S1SvImJ_G0024728.1 mouse_genomes_project 19 2748596 2761571 - MGP_129S1SvImJ_P0050638 Scyl1 protein_coding protein_coding MGP_129S1SvImJ_T0052137.1 MGP_129S1SvImJ_G0025253.1 mouse_genomes_project 19 54238903 54242704 + MGP_129S1SvImJ_P0052137 Adra2a protein_coding protein_coding MGP_129S1SvImJ_T0050549.1 MGP_129S1SvImJ_G0024697.1 mouse_genomes_project 19 2249489 2261007 + MGP_129S1SvImJ_P0050549 Gal3st3 protein_coding protein_coding MGP_129S1SvImJ_T0052010.1 MGP_129S1SvImJ_G0025204.1 mouse_genomes_project 19 45993045 45998814 - MGP_129S1SvImJ_P0052010 Psd protein_coding unknown_likely_coding MGP_129S1SvImJ_T0052011.1 MGP_129S1SvImJ_G0025204.1 mouse_genomes_project 19 45993052 46008122 - MGP_129S1SvImJ_P0052011 Psd protein_coding protein_coding MGP_129S1SvImJ_T0052012.1 MGP_129S1SvImJ_G0025204.1 mouse_genomes_project 19 45993052 46008122 - MGP_129S1SvImJ_P0052012 Psd protein_coding protein_coding MGP_129S1SvImJ_T0001039.1 MGP_129S1SvImJ_G0000968.1 mouse_genomes_project 19 1656227 1659296 - TEC TEC MGP_129S1SvImJ_T0050597.1 MGP_129S1SvImJ_G0024713.1 mouse_genomes_project 19 2465804 2480780 - MGP_129S1SvImJ_P0050597 Snx32 protein_coding protein_coding MGP_129S1SvImJ_T0051275.1 MGP_129S1SvImJ_G0024945.1 mouse_genomes_project 19 11311583 11312531 + MGP_129S1SvImJ_P0051275 Olfr1494 protein_coding protein_coding MGP_129S1SvImJ_T0050284.1 MGP_129S1SvImJ_G0024622.1 mouse_genomes_project 19 26688 38604 + MGP_129S1SvImJ_P0050284 Mrpl21 protein_coding protein_coding MGP_129S1SvImJ_T0050285.1 MGP_129S1SvImJ_G0024622.1 mouse_genomes_project 19 26842 34946 + Mrpl21 protein_coding retained_intron MGP_129S1SvImJ_T0050286.1 MGP_129S1SvImJ_G0024622.1 mouse_genomes_project 19 26847 31092 + Mrpl21 protein_coding retained_intron MGP_129S1SvImJ_T0050287.1 MGP_129S1SvImJ_G0024622.1 mouse_genomes_project 19 26847 36968 + MGP_129S1SvImJ_P0050287 Mrpl21 protein_coding protein_coding MGP_129S1SvImJ_T0050288.1 MGP_129S1SvImJ_G0024622.1 mouse_genomes_project 19 26851 33506 + MGP_129S1SvImJ_P0050288 Mrpl21 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050289.1 MGP_129S1SvImJ_G0024622.1 mouse_genomes_project 19 32577 36962 + Mrpl21 protein_coding retained_intron MGP_129S1SvImJ_T0007089.1 MGP_129S1SvImJ_G0005824.1 mouse_genomes_project 19 27950943 27987603 - A930007I19Rik lincRNA lincRNA MGP_129S1SvImJ_T0007090.1 MGP_129S1SvImJ_G0005824.1 mouse_genomes_project 19 27951522 27988768 - A930007I19Rik lincRNA lincRNA MGP_129S1SvImJ_T0007091.1 MGP_129S1SvImJ_G0005824.1 mouse_genomes_project 19 27968232 27987598 - A930007I19Rik lincRNA lincRNA MGP_129S1SvImJ_T0051062.1 MGP_129S1SvImJ_G0024832.1 mouse_genomes_project 19 7172200 7202182 - MGP_129S1SvImJ_P0051062 Incenp protein_coding protein_coding MGP_129S1SvImJ_T0051242.1 MGP_129S1SvImJ_G0024914.1 mouse_genomes_project 19 10248470 10250443 - MGP_129S1SvImJ_P0051242 Cntf protein_coding protein_coding MGP_129S1SvImJ_T0050481.1 MGP_129S1SvImJ_G0024670.1 mouse_genomes_project 19 1603802 1646144 + MGP_129S1SvImJ_P0050481 Sptbn2 protein_coding protein_coding MGP_129S1SvImJ_T0007123.1 MGP_129S1SvImJ_G0005848.1 mouse_genomes_project 19 60017878 60092233 + 2700089I24Rik lincRNA lincRNA MGP_129S1SvImJ_T0051477.1 MGP_129S1SvImJ_G0025024.1 mouse_genomes_project 19 27987890 28072900 + MGP_129S1SvImJ_P0051477 Ric1 protein_coding protein_coding MGP_129S1SvImJ_T0051478.1 MGP_129S1SvImJ_G0025024.1 mouse_genomes_project 19 27987943 28028561 + MGP_129S1SvImJ_P0051478 Ric1 protein_coding protein_coding MGP_129S1SvImJ_T0051479.1 MGP_129S1SvImJ_G0025024.1 mouse_genomes_project 19 27987990 28046458 + Ric1 protein_coding retained_intron MGP_129S1SvImJ_T0051480.1 MGP_129S1SvImJ_G0025024.1 mouse_genomes_project 19 28000034 28070241 + MGP_129S1SvImJ_P0051480 Ric1 protein_coding protein_coding MGP_129S1SvImJ_T0051481.1 MGP_129S1SvImJ_G0025024.1 mouse_genomes_project 19 28061733 28071226 + MGP_129S1SvImJ_P0051481 Ric1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051482.1 MGP_129S1SvImJ_G0025024.1 mouse_genomes_project 19 28063465 28065938 + Ric1 protein_coding retained_intron MGP_129S1SvImJ_T0051483.1 MGP_129S1SvImJ_G0025024.1 mouse_genomes_project 19 28064050 28071937 + MGP_129S1SvImJ_P0051483 Ric1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050869.1 MGP_129S1SvImJ_G0024774.1 mouse_genomes_project 19 4034863 4044901 + MGP_129S1SvImJ_P0050869 Bad protein_coding protein_coding MGP_129S1SvImJ_T0050870.1 MGP_129S1SvImJ_G0024774.1 mouse_genomes_project 19 4035325 4044895 + MGP_129S1SvImJ_P0050870 Bad protein_coding protein_coding MGP_129S1SvImJ_T0050871.1 MGP_129S1SvImJ_G0024774.1 mouse_genomes_project 19 4035503 4044896 + MGP_129S1SvImJ_P0050871 Bad protein_coding protein_coding MGP_129S1SvImJ_T0050872.1 MGP_129S1SvImJ_G0024774.1 mouse_genomes_project 19 4035881 4044255 + MGP_129S1SvImJ_P0050872 Bad protein_coding protein_coding MGP_129S1SvImJ_T0050873.1 MGP_129S1SvImJ_G0024774.1 mouse_genomes_project 19 4043769 4044877 + MGP_129S1SvImJ_P0050873 Bad protein_coding protein_coding MGP_129S1SvImJ_T0051322.1 MGP_129S1SvImJ_G0024969.1 mouse_genomes_project 19 16597957 16604034 + MGP_129S1SvImJ_P0051322 D030056L22Rik protein_coding protein_coding MGP_129S1SvImJ_T0051323.1 MGP_129S1SvImJ_G0024969.1 mouse_genomes_project 19 16598000 16604034 + MGP_129S1SvImJ_P0051323 D030056L22Rik protein_coding protein_coding MGP_129S1SvImJ_T0052072.1 MGP_129S1SvImJ_G0025231.1 mouse_genomes_project 19 47405722 47474677 + MGP_129S1SvImJ_P0052072 Slk protein_coding protein_coding MGP_129S1SvImJ_T0052073.1 MGP_129S1SvImJ_G0025231.1 mouse_genomes_project 19 47405967 47470470 + MGP_129S1SvImJ_P0052073 Slk protein_coding protein_coding MGP_129S1SvImJ_T0052074.1 MGP_129S1SvImJ_G0025231.1 mouse_genomes_project 19 47406142 47474683 + MGP_129S1SvImJ_P0052074 Slk protein_coding unknown_likely_coding MGP_129S1SvImJ_T0052075.1 MGP_129S1SvImJ_G0025231.1 mouse_genomes_project 19 47448344 47453005 + Slk protein_coding retained_intron MGP_129S1SvImJ_T0052076.1 MGP_129S1SvImJ_G0025231.1 mouse_genomes_project 19 47450332 47453505 + Slk protein_coding retained_intron MGP_129S1SvImJ_T0052077.1 MGP_129S1SvImJ_G0025231.1 mouse_genomes_project 19 47461982 47463307 + Slk protein_coding retained_intron MGP_129S1SvImJ_T0051298.1 MGP_129S1SvImJ_G0024959.1 mouse_genomes_project 19 14165165 14367970 + MGP_129S1SvImJ_P0051298 Gna14 protein_coding protein_coding MGP_129S1SvImJ_T0051373.1 MGP_129S1SvImJ_G0024992.1 mouse_genomes_project 19 22290420 22374925 - MGP_129S1SvImJ_P0051373 Tjp2 protein_coding protein_coding MGP_129S1SvImJ_T0010295.1 MGP_129S1SvImJ_G0008411.1 mouse_genomes_project 19 1059712 1059799 - Gm26115 miRNA miRNA MGP_129S1SvImJ_T0050567.1 MGP_129S1SvImJ_G0024707.1 mouse_genomes_project 19 2426026 2426635 - MGP_129S1SvImJ_P0050567 Ccdc85b protein_coding protein_coding MGP_129S1SvImJ_T0051371.1 MGP_129S1SvImJ_G0024990.1 mouse_genomes_project 19 21934071 22133559 + MGP_129S1SvImJ_P0051371 Apba1 protein_coding protein_coding MGP_129S1SvImJ_T0102371.1 MGP_129S1SvImJ_G0040205.1 mouse_genomes_project 19 6639066 6645420 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0051770.1 MGP_129S1SvImJ_G0025132.1 mouse_genomes_project 19 41236788 41248027 + MGP_129S1SvImJ_P0051770 Zdhhc16 protein_coding protein_coding MGP_129S1SvImJ_T0051771.1 MGP_129S1SvImJ_G0025132.1 mouse_genomes_project 19 41236858 41248035 + MGP_129S1SvImJ_P0051771 Zdhhc16 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0051095.1 MGP_129S1SvImJ_G0024845.1 mouse_genomes_project 19 7815120 7823761 - MGP_129S1SvImJ_P0051095 Ppp1r32 protein_coding protein_coding MGP_129S1SvImJ_T0050847.1 MGP_129S1SvImJ_G0024766.1 mouse_genomes_project 19 3914665 3926057 - MGP_129S1SvImJ_P0050847 Rps6ka4 protein_coding protein_coding MGP_129S1SvImJ_T0010300.1 MGP_129S1SvImJ_G0008416.1 mouse_genomes_project 19 3310322 3310408 + Mir194-2 miRNA miRNA MGP_129S1SvImJ_T0050483.1 MGP_129S1SvImJ_G0024672.1 mouse_genomes_project 19 1650333 1657001 + Rbm4b protein_coding retained_intron MGP_129S1SvImJ_T0050484.1 MGP_129S1SvImJ_G0024672.1 mouse_genomes_project 19 1650354 1654826 + Rbm4b protein_coding processed_transcript MGP_129S1SvImJ_T0050485.1 MGP_129S1SvImJ_G0024672.1 mouse_genomes_project 19 1650355 1655467 + Rbm4b protein_coding retained_intron MGP_129S1SvImJ_T0050486.1 MGP_129S1SvImJ_G0024672.1 mouse_genomes_project 19 1650361 1660065 + MGP_129S1SvImJ_P0050486 Rbm4b protein_coding protein_coding MGP_129S1SvImJ_T0050487.1 MGP_129S1SvImJ_G0024672.1 mouse_genomes_project 19 1655520 1661190 + Rbm4b protein_coding retained_intron MGP_129S1SvImJ_T0050488.1 MGP_129S1SvImJ_G0024672.1 mouse_genomes_project 19 1658589 1659768 + Rbm4b protein_coding processed_transcript MGP_129S1SvImJ_T0051041.1 MGP_129S1SvImJ_G0024824.1 mouse_genomes_project 19 6217415 6229147 + MGP_129S1SvImJ_P0051041 Eml3 protein_coding protein_coding MGP_129S1SvImJ_T0051042.1 MGP_129S1SvImJ_G0024824.1 mouse_genomes_project 19 6217652 6229175 + MGP_129S1SvImJ_P0051042 Eml3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0051525.1 MGP_129S1SvImJ_G0025038.1 mouse_genomes_project 19 30600077 30682589 - MGP_129S1SvImJ_P0051525 Asah2 protein_coding protein_coding MGP_129S1SvImJ_T0051684.1 MGP_129S1SvImJ_G0025099.1 mouse_genomes_project 19 38235642 38323403 + MGP_129S1SvImJ_P0051684 Cyp2c66 protein_coding protein_coding MGP_129S1SvImJ_T0051685.1 MGP_129S1SvImJ_G0025099.1 mouse_genomes_project 19 38235654 38323722 + MGP_129S1SvImJ_P0051685 Cyp2c66 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0007107.1 MGP_129S1SvImJ_G0005837.1 mouse_genomes_project 19 44904791 44905329 + Gm29594 lincRNA lincRNA MGP_129S1SvImJ_T0050530.1 MGP_129S1SvImJ_G0024690.1 mouse_genomes_project 19 1998516 1999790 - Tmem151a protein_coding processed_transcript MGP_129S1SvImJ_T0050531.1 MGP_129S1SvImJ_G0024690.1 mouse_genomes_project 19 1998692 2012879 - MGP_129S1SvImJ_P0050531 Tmem151a protein_coding protein_coding MGP_129S1SvImJ_T0050532.1 MGP_129S1SvImJ_G0024690.1 mouse_genomes_project 19 1999511 2012879 - MGP_129S1SvImJ_P0050532 Tmem151a protein_coding protein_coding MGP_129S1SvImJ_T0050533.1 MGP_129S1SvImJ_G0024690.1 mouse_genomes_project 19 2006723 2012923 - MGP_129S1SvImJ_P0050533 Tmem151a protein_coding protein_coding MGP_129S1SvImJ_T0050534.1 MGP_129S1SvImJ_G0024690.1 mouse_genomes_project 19 2010295 2012273 - Tmem151a protein_coding processed_transcript MGP_129S1SvImJ_T0100896.1 MGP_129S1SvImJ_G0038963.1 mouse_genomes_project 19 17984452 17984584 - Gm22684 snoRNA snoRNA MGP_129S1SvImJ_T0051741.1 MGP_129S1SvImJ_G0025116.1 mouse_genomes_project 19 40140663 40166256 + MGP_129S1SvImJ_P0051741 Zfp518a protein_coding protein_coding MGP_129S1SvImJ_T0003898.1 MGP_129S1SvImJ_G0003488.1 mouse_genomes_project 19 56707406 56709385 + Gm17197 antisense antisense MGP_129S1SvImJ_T0052138.1 MGP_129S1SvImJ_G0025254.1 mouse_genomes_project 19 55327590 55364739 - MGP_129S1SvImJ_P0052138 Gpam protein_coding unknown_likely_coding MGP_129S1SvImJ_T0098554.1 MGP_129S1SvImJ_G0036639.1 mouse_genomes_project 19 43367821 43367938 + n-R5s21 rRNA rRNA MGP_129S1SvImJ_T0051354.1 MGP_129S1SvImJ_G0024980.1 mouse_genomes_project 19 19704047 19736579 + MGP_129S1SvImJ_P0051354 Abhd17b protein_coding protein_coding MGP_129S1SvImJ_T0050359.1 MGP_129S1SvImJ_G0024639.1 mouse_genomes_project 19 822004 825692 + Doc2g protein_coding retained_intron MGP_129S1SvImJ_T0050360.1 MGP_129S1SvImJ_G0024639.1 mouse_genomes_project 19 822008 824472 + Doc2g protein_coding retained_intron MGP_129S1SvImJ_T0050361.1 MGP_129S1SvImJ_G0024639.1 mouse_genomes_project 19 822019 825693 + MGP_129S1SvImJ_P0050361 Doc2g protein_coding protein_coding MGP_129S1SvImJ_T0050362.1 MGP_129S1SvImJ_G0024639.1 mouse_genomes_project 19 822383 824821 + Doc2g protein_coding retained_intron MGP_129S1SvImJ_T0050537.1 MGP_129S1SvImJ_G0024693.1 mouse_genomes_project 19 2026247 2034037 - MGP_129S1SvImJ_P0050537 Rab1b protein_coding protein_coding MGP_129S1SvImJ_T0050670.1 MGP_129S1SvImJ_G0024738.1 mouse_genomes_project 19 3081215 3086971 - MGP_129S1SvImJ_P0050670 Mrpl49 protein_coding protein_coding MGP_129S1SvImJ_T0051792.1 MGP_129S1SvImJ_G0025136.1 mouse_genomes_project 19 41358265 41364944 + Hoga1 protein_coding processed_transcript MGP_129S1SvImJ_T0051793.1 MGP_129S1SvImJ_G0025136.1 mouse_genomes_project 19 41358447 41384597 + MGP_129S1SvImJ_P0051793 Hoga1 protein_coding protein_coding MGP_129S1SvImJ_T0051794.1 MGP_129S1SvImJ_G0025136.1 mouse_genomes_project 19 41358506 41372824 + Hoga1 protein_coding retained_intron MGP_129S1SvImJ_T0051795.1 MGP_129S1SvImJ_G0025136.1 mouse_genomes_project 19 41358573 41387444 + MGP_129S1SvImJ_P0051795 Hoga1 protein_coding protein_coding MGP_129S1SvImJ_T0050963.1 MGP_129S1SvImJ_G0024806.1 mouse_genomes_project 19 6013412 6029333 + MGP_129S1SvImJ_P0050963 Stx5a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050964.1 MGP_129S1SvImJ_G0024806.1 mouse_genomes_project 19 6013469 6014670 + Stx5a protein_coding retained_intron MGP_129S1SvImJ_T0050965.1 MGP_129S1SvImJ_G0024806.1 mouse_genomes_project 19 6013487 6029349 + MGP_129S1SvImJ_P0050965 Stx5a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050966.1 MGP_129S1SvImJ_G0024806.1 mouse_genomes_project 19 6013488 6029389 + MGP_129S1SvImJ_P0050966 Stx5a protein_coding protein_coding MGP_129S1SvImJ_T0050967.1 MGP_129S1SvImJ_G0024806.1 mouse_genomes_project 19 6013511 6016526 + Stx5a protein_coding retained_intron MGP_129S1SvImJ_T0050968.1 MGP_129S1SvImJ_G0024806.1 mouse_genomes_project 19 6013668 6014860 + MGP_129S1SvImJ_P0050968 Stx5a protein_coding protein_coding MGP_129S1SvImJ_T0050969.1 MGP_129S1SvImJ_G0024806.1 mouse_genomes_project 19 6013806 6021772 + MGP_129S1SvImJ_P0050969 Stx5a protein_coding protein_coding MGP_129S1SvImJ_T0050970.1 MGP_129S1SvImJ_G0024806.1 mouse_genomes_project 19 6013887 6029389 + MGP_129S1SvImJ_P0050970 Stx5a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050971.1 MGP_129S1SvImJ_G0024806.1 mouse_genomes_project 19 6014143 6020888 + Stx5a protein_coding retained_intron MGP_129S1SvImJ_T0050972.1 MGP_129S1SvImJ_G0024806.1 mouse_genomes_project 19 6014272 6028815 + MGP_129S1SvImJ_P0050972 Stx5a protein_coding protein_coding MGP_129S1SvImJ_T0050973.1 MGP_129S1SvImJ_G0024806.1 mouse_genomes_project 19 6014859 6021119 + Stx5a protein_coding retained_intron MGP_129S1SvImJ_T0050974.1 MGP_129S1SvImJ_G0024806.1 mouse_genomes_project 19 6020502 6028805 + Stx5a protein_coding retained_intron MGP_129S1SvImJ_T0050975.1 MGP_129S1SvImJ_G0024806.1 mouse_genomes_project 19 6020517 6021713 + Stx5a protein_coding retained_intron MGP_129S1SvImJ_T0050976.1 MGP_129S1SvImJ_G0024806.1 mouse_genomes_project 19 6020532 6028731 + Stx5a protein_coding retained_intron MGP_129S1SvImJ_T0050977.1 MGP_129S1SvImJ_G0024806.1 mouse_genomes_project 19 6020589 6021378 + Stx5a protein_coding retained_intron MGP_129S1SvImJ_T0050978.1 MGP_129S1SvImJ_G0024806.1 mouse_genomes_project 19 6021398 6022094 + MGP_129S1SvImJ_P0050978 Stx5a protein_coding protein_coding MGP_129S1SvImJ_T0051249.1 MGP_129S1SvImJ_G0024919.1 mouse_genomes_project 19 10397413 10398516 - MGP_129S1SvImJ_P0051249 Olfr1447 protein_coding protein_coding MGP_129S1SvImJ_T0052151.1 MGP_129S1SvImJ_G0025260.1 mouse_genomes_project 19 56040206 56246478 + MGP_129S1SvImJ_P0052151 protein_coding protein_coding MGP_129S1SvImJ_T0052152.1 MGP_129S1SvImJ_G0025260.1 mouse_genomes_project 19 56040206 56246478 + MGP_129S1SvImJ_P0052152 protein_coding protein_coding MGP_129S1SvImJ_T0052153.1 MGP_129S1SvImJ_G0025260.1 mouse_genomes_project 19 56040216 56246076 + MGP_129S1SvImJ_P0052153 protein_coding protein_coding MGP_129S1SvImJ_T0052154.1 MGP_129S1SvImJ_G0025260.1 mouse_genomes_project 19 56040216 56246053 + MGP_129S1SvImJ_P0052154 protein_coding protein_coding MGP_129S1SvImJ_T0052155.1 MGP_129S1SvImJ_G0025260.1 mouse_genomes_project 19 56040280 56245539 + MGP_129S1SvImJ_P0052155 protein_coding protein_coding MGP_129S1SvImJ_T0052156.1 MGP_129S1SvImJ_G0025260.1 mouse_genomes_project 19 56040280 56238030 + MGP_129S1SvImJ_P0052156 protein_coding protein_coding MGP_129S1SvImJ_T0052157.1 MGP_129S1SvImJ_G0025260.1 mouse_genomes_project 19 56040451 56245033 + MGP_129S1SvImJ_P0052157 protein_coding protein_coding MGP_129S1SvImJ_T0052158.1 MGP_129S1SvImJ_G0025260.1 mouse_genomes_project 19 56040635 56223191 + MGP_129S1SvImJ_P0052158 protein_coding protein_coding MGP_129S1SvImJ_T0052159.1 MGP_129S1SvImJ_G0025260.1 mouse_genomes_project 19 56040636 56223191 + MGP_129S1SvImJ_P0052159 protein_coding protein_coding MGP_129S1SvImJ_T0052160.1 MGP_129S1SvImJ_G0025260.1 mouse_genomes_project 19 56040636 56223190 + MGP_129S1SvImJ_P0052160 protein_coding protein_coding MGP_129S1SvImJ_T0052161.1 MGP_129S1SvImJ_G0025260.1 mouse_genomes_project 19 56040663 56221017 + protein_coding retained_intron MGP_129S1SvImJ_T0052162.1 MGP_129S1SvImJ_G0025260.1 mouse_genomes_project 19 56040663 56238027 + MGP_129S1SvImJ_P0052162 protein_coding protein_coding MGP_129S1SvImJ_T0052163.1 MGP_129S1SvImJ_G0025260.1 mouse_genomes_project 19 56040712 56246478 + MGP_129S1SvImJ_P0052163 protein_coding protein_coding MGP_129S1SvImJ_T0052164.1 MGP_129S1SvImJ_G0025260.1 mouse_genomes_project 19 56040744 56246055 + MGP_129S1SvImJ_P0052164 protein_coding protein_coding MGP_129S1SvImJ_T0052165.1 MGP_129S1SvImJ_G0025260.1 mouse_genomes_project 19 56040848 56245033 + MGP_129S1SvImJ_P0052165 protein_coding protein_coding MGP_129S1SvImJ_T0052166.1 MGP_129S1SvImJ_G0025260.1 mouse_genomes_project 19 56203830 56232411 + protein_coding processed_transcript MGP_129S1SvImJ_T0052167.1 MGP_129S1SvImJ_G0025260.1 mouse_genomes_project 19 56205012 56231759 + MGP_129S1SvImJ_P0052167 protein_coding protein_coding MGP_129S1SvImJ_T0052168.1 MGP_129S1SvImJ_G0025260.1 mouse_genomes_project 19 56205988 56246053 + MGP_129S1SvImJ_P0052168 protein_coding protein_coding MGP_129S1SvImJ_T0052169.1 MGP_129S1SvImJ_G0025260.1 mouse_genomes_project 19 56206140 56223105 + protein_coding processed_transcript MGP_129S1SvImJ_T0052170.1 MGP_129S1SvImJ_G0025260.1 mouse_genomes_project 19 56208781 56231834 + protein_coding processed_transcript MGP_129S1SvImJ_T0052171.1 MGP_129S1SvImJ_G0025260.1 mouse_genomes_project 19 56209025 56232397 + MGP_129S1SvImJ_P0052171 protein_coding protein_coding MGP_129S1SvImJ_T0052030.1 MGP_129S1SvImJ_G0025212.1 mouse_genomes_project 19 46306016 46337599 + MGP_129S1SvImJ_P0052030 Sfxn2 protein_coding protein_coding MGP_129S1SvImJ_T0051723.1 MGP_129S1SvImJ_G0025113.1 mouse_genomes_project 19 39812529 39828286 - MGP_129S1SvImJ_P0051723 Tctn3 protein_coding protein_coding MGP_129S1SvImJ_T0051724.1 MGP_129S1SvImJ_G0025113.1 mouse_genomes_project 19 39821142 39828256 - MGP_129S1SvImJ_P0051724 Tctn3 protein_coding protein_coding MGP_129S1SvImJ_T0051725.1 MGP_129S1SvImJ_G0025113.1 mouse_genomes_project 19 39823169 39828253 - MGP_129S1SvImJ_P0051725 Tctn3 protein_coding protein_coding MGP_129S1SvImJ_T0051726.1 MGP_129S1SvImJ_G0025113.1 mouse_genomes_project 19 39827177 39828241 - Tctn3 protein_coding retained_intron MGP_129S1SvImJ_T0052078.1 MGP_129S1SvImJ_G0025232.1 mouse_genomes_project 19 47475770 47525053 - MGP_129S1SvImJ_P0052078 Col17a1 protein_coding protein_coding MGP_129S1SvImJ_T0052079.1 MGP_129S1SvImJ_G0025232.1 mouse_genomes_project 19 47475770 47525053 - MGP_129S1SvImJ_P0052079 Col17a1 protein_coding protein_coding MGP_129S1SvImJ_T0052080.1 MGP_129S1SvImJ_G0025232.1 mouse_genomes_project 19 47477526 47479022 - Col17a1 protein_coding processed_transcript MGP_129S1SvImJ_T0052081.1 MGP_129S1SvImJ_G0025232.1 mouse_genomes_project 19 47499399 47502645 - Col17a1 protein_coding processed_transcript MGP_129S1SvImJ_T0052262.1 MGP_129S1SvImJ_G0025285.1 mouse_genomes_project 19 59676017 59679887 - MGP_129S1SvImJ_P0052262 Vax1 protein_coding protein_coding MGP_129S1SvImJ_T0052263.1 MGP_129S1SvImJ_G0025285.1 mouse_genomes_project 19 59676428 59676811 - Vax1 protein_coding processed_transcript MGP_129S1SvImJ_T0051912.1 MGP_129S1SvImJ_G0025176.1 mouse_genomes_project 19 44276900 44361902 + MGP_129S1SvImJ_P0051912 Pax2 protein_coding protein_coding MGP_129S1SvImJ_T0051913.1 MGP_129S1SvImJ_G0025176.1 mouse_genomes_project 19 44278248 44361922 + MGP_129S1SvImJ_P0051913 Pax2 protein_coding protein_coding MGP_129S1SvImJ_T0051914.1 MGP_129S1SvImJ_G0025176.1 mouse_genomes_project 19 44281811 44340245 + MGP_129S1SvImJ_P0051914 Pax2 protein_coding protein_coding MGP_129S1SvImJ_T0052052.1 MGP_129S1SvImJ_G0025223.1 mouse_genomes_project 19 46867701 46908667 + MGP_129S1SvImJ_P0052052 Pdcd11 protein_coding protein_coding MGP_129S1SvImJ_T0007100.1 MGP_129S1SvImJ_G0005831.1 mouse_genomes_project 19 39805517 39810944 + Gm27042 lincRNA lincRNA MGP_129S1SvImJ_T0050886.1 MGP_129S1SvImJ_G0024782.1 mouse_genomes_project 19 4127257 4150181 - MGP_129S1SvImJ_P0050886 Stip1 protein_coding protein_coding MGP_129S1SvImJ_T0051043.1 MGP_129S1SvImJ_G0024825.1 mouse_genomes_project 19 6229458 6241068 + MGP_129S1SvImJ_P0051043 Mta2 protein_coding protein_coding MGP_129S1SvImJ_T0051044.1 MGP_129S1SvImJ_G0024825.1 mouse_genomes_project 19 6230076 6233457 + Mta2 protein_coding processed_transcript MGP_129S1SvImJ_T0051045.1 MGP_129S1SvImJ_G0024825.1 mouse_genomes_project 19 6230089 6234311 + Mta2 protein_coding processed_transcript MGP_129S1SvImJ_T0051046.1 MGP_129S1SvImJ_G0024825.1 mouse_genomes_project 19 6231617 6234716 + Mta2 protein_coding retained_intron MGP_129S1SvImJ_T0051047.1 MGP_129S1SvImJ_G0024825.1 mouse_genomes_project 19 6232678 6234332 + Mta2 protein_coding processed_transcript MGP_129S1SvImJ_T0051048.1 MGP_129S1SvImJ_G0024825.1 mouse_genomes_project 19 6233983 6235278 + Mta2 protein_coding retained_intron MGP_129S1SvImJ_T0013394.1 MGP_129S1SvImJ_G0011483.1 mouse_genomes_project 19 23299573 23299921 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003861.1 MGP_129S1SvImJ_G0003464.1 mouse_genomes_project 19 1698056 1702329 + Gm21844 antisense antisense MGP_129S1SvImJ_T0051218.1 MGP_129S1SvImJ_G0024903.1 mouse_genomes_project 19 9888830 9889918 + MGP_129S1SvImJ_P0051218 Olfr1441 protein_coding protein_coding MGP_129S1SvImJ_T0050690.1 MGP_129S1SvImJ_G0024743.1 mouse_genomes_project 19 3097040 3109517 - MGP_129S1SvImJ_P0050690 Vps51 protein_coding protein_coding MGP_129S1SvImJ_T0050691.1 MGP_129S1SvImJ_G0024743.1 mouse_genomes_project 19 3097188 3098518 - Vps51 protein_coding retained_intron MGP_129S1SvImJ_T0050692.1 MGP_129S1SvImJ_G0024743.1 mouse_genomes_project 19 3097192 3106396 - MGP_129S1SvImJ_P0050692 Vps51 protein_coding protein_coding MGP_129S1SvImJ_T0050693.1 MGP_129S1SvImJ_G0024743.1 mouse_genomes_project 19 3097249 3098349 - Vps51 protein_coding retained_intron MGP_129S1SvImJ_T0050694.1 MGP_129S1SvImJ_G0024743.1 mouse_genomes_project 19 3097415 3098270 - MGP_129S1SvImJ_P0050694 Vps51 protein_coding protein_coding MGP_129S1SvImJ_T0050695.1 MGP_129S1SvImJ_G0024743.1 mouse_genomes_project 19 3097947 3098812 - Vps51 protein_coding retained_intron MGP_129S1SvImJ_T0050696.1 MGP_129S1SvImJ_G0024743.1 mouse_genomes_project 19 3098066 3098897 - Vps51 protein_coding retained_intron MGP_129S1SvImJ_T0050697.1 MGP_129S1SvImJ_G0024743.1 mouse_genomes_project 19 3099279 3106402 - Vps51 protein_coding retained_intron MGP_129S1SvImJ_T0050698.1 MGP_129S1SvImJ_G0024743.1 mouse_genomes_project 19 3100615 3106067 - Vps51 protein_coding retained_intron MGP_129S1SvImJ_T0050699.1 MGP_129S1SvImJ_G0024743.1 mouse_genomes_project 19 3100680 3106397 - MGP_129S1SvImJ_P0050699 Vps51 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050700.1 MGP_129S1SvImJ_G0024743.1 mouse_genomes_project 19 3105101 3106399 - MGP_129S1SvImJ_P0050700 Vps51 protein_coding protein_coding MGP_129S1SvImJ_T0003878.1 MGP_129S1SvImJ_G0003473.1 mouse_genomes_project 19 8590439 8680218 + 4930526L06Rik antisense antisense MGP_129S1SvImJ_T0013398.1 MGP_129S1SvImJ_G0011487.1 mouse_genomes_project 19 27185660 27185930 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0102375.1 MGP_129S1SvImJ_G0040209.1 mouse_genomes_project 19 32571477 32575722 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0010311.1 MGP_129S1SvImJ_G0008427.1 mouse_genomes_project 19 7514885 7514950 + Mir6993 miRNA miRNA MGP_129S1SvImJ_T0051967.1 MGP_129S1SvImJ_G0025197.1 mouse_genomes_project 19 45689225 45703885 - MGP_129S1SvImJ_P0051967 Ldb1 protein_coding protein_coding MGP_129S1SvImJ_T0051968.1 MGP_129S1SvImJ_G0025197.1 mouse_genomes_project 19 45689226 45696146 - MGP_129S1SvImJ_P0051968 Ldb1 protein_coding protein_coding MGP_129S1SvImJ_T0051969.1 MGP_129S1SvImJ_G0025197.1 mouse_genomes_project 19 45689248 45703882 - MGP_129S1SvImJ_P0051969 Ldb1 protein_coding protein_coding MGP_129S1SvImJ_T0051970.1 MGP_129S1SvImJ_G0025197.1 mouse_genomes_project 19 45689321 45703881 - MGP_129S1SvImJ_P0051970 Ldb1 protein_coding protein_coding MGP_129S1SvImJ_T0051971.1 MGP_129S1SvImJ_G0025197.1 mouse_genomes_project 19 45689321 45703585 - MGP_129S1SvImJ_P0051971 Ldb1 protein_coding protein_coding MGP_129S1SvImJ_T0051972.1 MGP_129S1SvImJ_G0025197.1 mouse_genomes_project 19 45690377 45691511 - Ldb1 protein_coding retained_intron MGP_129S1SvImJ_T0051973.1 MGP_129S1SvImJ_G0025197.1 mouse_genomes_project 19 45690601 45703525 - MGP_129S1SvImJ_P0051973 Ldb1 protein_coding protein_coding MGP_129S1SvImJ_T0051974.1 MGP_129S1SvImJ_G0025197.1 mouse_genomes_project 19 45690683 45692633 - Ldb1 protein_coding retained_intron MGP_129S1SvImJ_T0050863.1 MGP_129S1SvImJ_G0024772.1 mouse_genomes_project 19 4015234 4026523 - MGP_129S1SvImJ_P0050863 Kcnk4 protein_coding protein_coding MGP_129S1SvImJ_T0051304.1 MGP_129S1SvImJ_G0024963.1 mouse_genomes_project 19 15144817 15180745 - MGP_129S1SvImJ_P0051304 Gcnt1 protein_coding protein_coding MGP_129S1SvImJ_T0051305.1 MGP_129S1SvImJ_G0024963.1 mouse_genomes_project 19 15144819 15160456 - MGP_129S1SvImJ_P0051305 Gcnt1 protein_coding protein_coding MGP_129S1SvImJ_T0051306.1 MGP_129S1SvImJ_G0024963.1 mouse_genomes_project 19 15150854 15180745 - Gcnt1 protein_coding retained_intron MGP_129S1SvImJ_T0099632.1 MGP_129S1SvImJ_G0037699.1 mouse_genomes_project 19 13368178 13368285 + Gm24319 snRNA snRNA MGP_129S1SvImJ_T0050386.1 MGP_129S1SvImJ_G0024646.1 mouse_genomes_project 19 932901 946861 + MGP_129S1SvImJ_P0050386 Pitpnm1 protein_coding protein_coding MGP_129S1SvImJ_T0050387.1 MGP_129S1SvImJ_G0024646.1 mouse_genomes_project 19 932949 946861 + Pitpnm1 protein_coding retained_intron MGP_129S1SvImJ_T0050388.1 MGP_129S1SvImJ_G0024646.1 mouse_genomes_project 19 933172 937825 + MGP_129S1SvImJ_P0050388 Pitpnm1 protein_coding protein_coding MGP_129S1SvImJ_T0050389.1 MGP_129S1SvImJ_G0024646.1 mouse_genomes_project 19 933525 946861 + MGP_129S1SvImJ_P0050389 Pitpnm1 protein_coding protein_coding MGP_129S1SvImJ_T0050390.1 MGP_129S1SvImJ_G0024646.1 mouse_genomes_project 19 941099 942803 + Pitpnm1 protein_coding retained_intron MGP_129S1SvImJ_T0050391.1 MGP_129S1SvImJ_G0024646.1 mouse_genomes_project 19 941647 945113 + Pitpnm1 protein_coding processed_transcript MGP_129S1SvImJ_T0050392.1 MGP_129S1SvImJ_G0024646.1 mouse_genomes_project 19 942543 943630 + Pitpnm1 protein_coding retained_intron MGP_129S1SvImJ_T0050393.1 MGP_129S1SvImJ_G0024646.1 mouse_genomes_project 19 943695 944920 + Pitpnm1 protein_coding retained_intron MGP_129S1SvImJ_T0050394.1 MGP_129S1SvImJ_G0024646.1 mouse_genomes_project 19 944056 945267 + Pitpnm1 protein_coding retained_intron MGP_129S1SvImJ_T0050395.1 MGP_129S1SvImJ_G0024646.1 mouse_genomes_project 19 944824 946511 + Pitpnm1 protein_coding retained_intron MGP_129S1SvImJ_T0050396.1 MGP_129S1SvImJ_G0024646.1 mouse_genomes_project 19 945215 946861 + Pitpnm1 protein_coding retained_intron MGP_129S1SvImJ_T0051388.1 MGP_129S1SvImJ_G0025000.1 mouse_genomes_project 19 23264269 23480849 + MGP_129S1SvImJ_P0051388 Dock8 protein_coding protein_coding MGP_129S1SvImJ_T0051570.1 MGP_129S1SvImJ_G0025057.1 mouse_genomes_project 19 33216600 33217950 - MGP_129S1SvImJ_P0051570 Ch25h protein_coding protein_coding MGP_129S1SvImJ_T0013384.1 MGP_129S1SvImJ_G0011473.1 mouse_genomes_project 19 9714075 9714231 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0099627.1 MGP_129S1SvImJ_G0037694.1 mouse_genomes_project 19 1815684 1815794 + Gm25334 snRNA snRNA MGP_129S1SvImJ_T0051752.1 MGP_129S1SvImJ_G0025123.1 mouse_genomes_project 19 40745001 40835602 + MGP_129S1SvImJ_P0051752 Lcor protein_coding protein_coding MGP_129S1SvImJ_T0051753.1 MGP_129S1SvImJ_G0025123.1 mouse_genomes_project 19 40822999 40833137 + MGP_129S1SvImJ_P0051753 Lcor protein_coding protein_coding MGP_129S1SvImJ_T0011491.1 MGP_129S1SvImJ_G0009607.1 mouse_genomes_project 19 2800614 2800700 - Gm27694 misc_RNA misc_RNA MGP_129S1SvImJ_T0013379.1 MGP_129S1SvImJ_G0011468.1 mouse_genomes_project 19 5853711 5854501 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100910.1 MGP_129S1SvImJ_G0038977.1 mouse_genomes_project 19 61375372 61375504 - Snora19 snoRNA snoRNA MGP_129S1SvImJ_T0052237.1 MGP_129S1SvImJ_G0025273.1 mouse_genomes_project 19 57783994 57813795 + MGP_129S1SvImJ_P0052237 Fam160b1 protein_coding protein_coding MGP_129S1SvImJ_T0051077.1 MGP_129S1SvImJ_G0024840.1 mouse_genomes_project 19 7527421 7531232 + Tmem258 protein_coding processed_transcript MGP_129S1SvImJ_T0051078.1 MGP_129S1SvImJ_G0024840.1 mouse_genomes_project 19 7527421 7531232 + MGP_129S1SvImJ_P0051078 Tmem258 protein_coding protein_coding MGP_129S1SvImJ_T0051079.1 MGP_129S1SvImJ_G0024840.1 mouse_genomes_project 19 7527625 7531226 + Tmem258 protein_coding retained_intron MGP_129S1SvImJ_T0051080.1 MGP_129S1SvImJ_G0024840.1 mouse_genomes_project 19 7529440 7531232 + MGP_129S1SvImJ_P0051080 Tmem258 protein_coding protein_coding MGP_129S1SvImJ_T0051347.1 MGP_129S1SvImJ_G0024979.1 mouse_genomes_project 19 19623791 19703467 - MGP_129S1SvImJ_P0051347 1110059E24Rik protein_coding protein_coding MGP_129S1SvImJ_T0051348.1 MGP_129S1SvImJ_G0024979.1 mouse_genomes_project 19 19642974 19703539 - MGP_129S1SvImJ_P0051348 1110059E24Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051349.1 MGP_129S1SvImJ_G0024979.1 mouse_genomes_project 19 19643443 19680552 - MGP_129S1SvImJ_P0051349 1110059E24Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051350.1 MGP_129S1SvImJ_G0024979.1 mouse_genomes_project 19 19643463 19703447 - MGP_129S1SvImJ_P0051350 1110059E24Rik protein_coding protein_coding MGP_129S1SvImJ_T0051351.1 MGP_129S1SvImJ_G0024979.1 mouse_genomes_project 19 19643598 19703656 - MGP_129S1SvImJ_P0051351 1110059E24Rik protein_coding protein_coding MGP_129S1SvImJ_T0051352.1 MGP_129S1SvImJ_G0024979.1 mouse_genomes_project 19 19644099 19703349 - MGP_129S1SvImJ_P0051352 1110059E24Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051353.1 MGP_129S1SvImJ_G0024979.1 mouse_genomes_project 19 19663576 19703532 - 1110059E24Rik protein_coding retained_intron MGP_129S1SvImJ_T0051524.1 MGP_129S1SvImJ_G0025037.1 mouse_genomes_project 19 30479480 30560179 + MGP_129S1SvImJ_P0051524 A1cf protein_coding protein_coding MGP_129S1SvImJ_T0013382.1 MGP_129S1SvImJ_G0011471.1 mouse_genomes_project 19 8794636 8795693 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0052031.1 MGP_129S1SvImJ_G0025213.1 mouse_genomes_project 19 46339777 46406433 + MGP_129S1SvImJ_P0052031 Wbp1l protein_coding protein_coding MGP_129S1SvImJ_T0052032.1 MGP_129S1SvImJ_G0025213.1 mouse_genomes_project 19 46339806 46406429 + MGP_129S1SvImJ_P0052032 Wbp1l protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052033.1 MGP_129S1SvImJ_G0025213.1 mouse_genomes_project 19 46339807 46406426 + MGP_129S1SvImJ_P0052033 Wbp1l protein_coding protein_coding MGP_129S1SvImJ_T0052034.1 MGP_129S1SvImJ_G0025213.1 mouse_genomes_project 19 46339817 46393808 + Wbp1l protein_coding processed_transcript MGP_129S1SvImJ_T0052035.1 MGP_129S1SvImJ_G0025213.1 mouse_genomes_project 19 46366755 46401577 + Wbp1l protein_coding processed_transcript MGP_129S1SvImJ_T0052036.1 MGP_129S1SvImJ_G0025213.1 mouse_genomes_project 19 46366755 46406431 + MGP_129S1SvImJ_P0052036 Wbp1l protein_coding protein_coding MGP_129S1SvImJ_T0010299.1 MGP_129S1SvImJ_G0008415.1 mouse_genomes_project 19 3078919 3078978 + Mir6988 miRNA miRNA MGP_129S1SvImJ_T0003872.1 MGP_129S1SvImJ_G0003469.1 mouse_genomes_project 19 3599790 3601091 - Gm14964 antisense antisense MGP_129S1SvImJ_T0003873.1 MGP_129S1SvImJ_G0003469.1 mouse_genomes_project 19 3599868 3600868 - Gm14964 antisense antisense MGP_129S1SvImJ_T0051867.1 MGP_129S1SvImJ_G0025161.1 mouse_genomes_project 19 43451678 43480982 - MGP_129S1SvImJ_P0051867 Cyp2c44 protein_coding protein_coding MGP_129S1SvImJ_T0051295.1 MGP_129S1SvImJ_G0024958.1 mouse_genomes_project 19 13841128 14115382 + MGP_129S1SvImJ_P0051295 Gnaq protein_coding protein_coding MGP_129S1SvImJ_T0051296.1 MGP_129S1SvImJ_G0024958.1 mouse_genomes_project 19 13841593 14042341 + Gnaq protein_coding retained_intron MGP_129S1SvImJ_T0051297.1 MGP_129S1SvImJ_G0024958.1 mouse_genomes_project 19 13932465 14043088 + Gnaq protein_coding processed_transcript MGP_129S1SvImJ_T0051593.1 MGP_129S1SvImJ_G0025070.1 mouse_genomes_project 19 34960451 34968895 - MGP_129S1SvImJ_P0051593 Ankrd1 protein_coding protein_coding MGP_129S1SvImJ_T0051582.1 MGP_129S1SvImJ_G0025065.1 mouse_genomes_project 19 33428671 33514222 - MGP_129S1SvImJ_P0051582 Slc16a12 protein_coding protein_coding MGP_129S1SvImJ_T0051106.1 MGP_129S1SvImJ_G0024851.1 mouse_genomes_project 19 7942159 7954218 - MGP_129S1SvImJ_P0051106 Tkfc protein_coding protein_coding MGP_129S1SvImJ_T0098551.1 MGP_129S1SvImJ_G0036636.1 mouse_genomes_project 19 34430346 34430477 - Gm22853 rRNA rRNA MGP_129S1SvImJ_T0051039.1 MGP_129S1SvImJ_G0024822.1 mouse_genomes_project 19 6207840 6214956 + MGP_129S1SvImJ_P0051039 B3gat3 protein_coding protein_coding MGP_129S1SvImJ_T0013396.1 MGP_129S1SvImJ_G0011485.1 mouse_genomes_project 19 26235601 26236041 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0050346.1 MGP_129S1SvImJ_G0024632.1 mouse_genomes_project 19 717341 721189 - MGP_129S1SvImJ_P0050346 Ndufs8 protein_coding protein_coding MGP_129S1SvImJ_T0051281.1 MGP_129S1SvImJ_G0024951.1 mouse_genomes_project 19 11437737 11438685 - MGP_129S1SvImJ_P0051281 Olfr1501 protein_coding protein_coding MGP_129S1SvImJ_T0051918.1 MGP_129S1SvImJ_G0025180.1 mouse_genomes_project 19 44544584 44551768 + MGP_129S1SvImJ_P0051918 Peo1 protein_coding protein_coding MGP_129S1SvImJ_T0051476.1 MGP_129S1SvImJ_G0025023.1 mouse_genomes_project 19 27872519 27934918 + MGP_129S1SvImJ_P0051476 Pdcd1lg2 protein_coding protein_coding MGP_129S1SvImJ_T0017689.1 MGP_129S1SvImJ_G0015373.1 mouse_genomes_project 19 585576 656109 - Gm16066 processed_transcript processed_transcript MGP_129S1SvImJ_T0051868.1 MGP_129S1SvImJ_G0025162.1 mouse_genomes_project 19 43486683 43521545 - MGP_129S1SvImJ_P0051868 Erlin1 protein_coding protein_coding MGP_129S1SvImJ_T0051869.1 MGP_129S1SvImJ_G0025162.1 mouse_genomes_project 19 43486683 43521794 - MGP_129S1SvImJ_P0051869 Erlin1 protein_coding protein_coding MGP_129S1SvImJ_T0051870.1 MGP_129S1SvImJ_G0025162.1 mouse_genomes_project 19 43486683 43521804 - MGP_129S1SvImJ_P0051870 Erlin1 protein_coding protein_coding MGP_129S1SvImJ_T0051871.1 MGP_129S1SvImJ_G0025162.1 mouse_genomes_project 19 43508091 43521775 - MGP_129S1SvImJ_P0051871 Erlin1 protein_coding protein_coding MGP_129S1SvImJ_T0051872.1 MGP_129S1SvImJ_G0025162.1 mouse_genomes_project 19 43510963 43521414 - MGP_129S1SvImJ_P0051872 Erlin1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051873.1 MGP_129S1SvImJ_G0025162.1 mouse_genomes_project 19 43510965 43519707 - MGP_129S1SvImJ_P0051873 Erlin1 protein_coding protein_coding MGP_129S1SvImJ_T0051874.1 MGP_129S1SvImJ_G0025162.1 mouse_genomes_project 19 43518086 43521763 - Erlin1 protein_coding retained_intron MGP_129S1SvImJ_T0051875.1 MGP_129S1SvImJ_G0025162.1 mouse_genomes_project 19 43519496 43521715 - Erlin1 protein_coding retained_intron MGP_129S1SvImJ_T0051876.1 MGP_129S1SvImJ_G0025162.1 mouse_genomes_project 19 43521334 43521709 - MGP_129S1SvImJ_P0051876 Erlin1 protein_coding protein_coding MGP_129S1SvImJ_T0100891.1 MGP_129S1SvImJ_G0038958.1 mouse_genomes_project 19 6172810 6172958 - Snora57 snoRNA snoRNA MGP_129S1SvImJ_T0013374.1 MGP_129S1SvImJ_G0011463.1 mouse_genomes_project 19 3185825 3186655 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0052146.1 MGP_129S1SvImJ_G0025257.1 mouse_genomes_project 19 55519821 55564602 + MGP_129S1SvImJ_P0052146 Acsl5 protein_coding protein_coding MGP_129S1SvImJ_T0051283.1 MGP_129S1SvImJ_G0024953.1 mouse_genomes_project 19 11487680 11488765 - MGP_129S1SvImJ_P0051283 Olfr1504 protein_coding protein_coding MGP_129S1SvImJ_T0050382.1 MGP_129S1SvImJ_G0024645.1 mouse_genomes_project 19 930304 931923 + Cdk2ap2 protein_coding retained_intron MGP_129S1SvImJ_T0050383.1 MGP_129S1SvImJ_G0024645.1 mouse_genomes_project 19 930304 931369 + MGP_129S1SvImJ_P0050383 Cdk2ap2 protein_coding protein_coding MGP_129S1SvImJ_T0050384.1 MGP_129S1SvImJ_G0024645.1 mouse_genomes_project 19 930305 931914 + MGP_129S1SvImJ_P0050384 Cdk2ap2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050385.1 MGP_129S1SvImJ_G0024645.1 mouse_genomes_project 19 930329 931921 + MGP_129S1SvImJ_P0050385 Cdk2ap2 protein_coding protein_coding MGP_129S1SvImJ_T0051397.1 MGP_129S1SvImJ_G0025004.1 mouse_genomes_project 19 23985880 23992400 + MGP_129S1SvImJ_P0051397 Dmrt2 protein_coding protein_coding MGP_129S1SvImJ_T0010310.1 MGP_129S1SvImJ_G0008426.1 mouse_genomes_project 19 7148395 7148499 + Gm22369 miRNA miRNA MGP_129S1SvImJ_T0051355.1 MGP_129S1SvImJ_G0024981.1 mouse_genomes_project 19 19848370 19929585 + MGP_129S1SvImJ_P0051355 Tmem2 protein_coding protein_coding MGP_129S1SvImJ_T0051356.1 MGP_129S1SvImJ_G0024981.1 mouse_genomes_project 19 19848370 19929584 + MGP_129S1SvImJ_P0051356 Tmem2 protein_coding protein_coding MGP_129S1SvImJ_T0098550.1 MGP_129S1SvImJ_G0036635.1 mouse_genomes_project 19 4382553 4382674 + Gm23997 rRNA rRNA MGP_129S1SvImJ_T0099647.1 MGP_129S1SvImJ_G0037714.1 mouse_genomes_project 19 47548137 47548241 - Gm24805 snRNA snRNA MGP_129S1SvImJ_T0051257.1 MGP_129S1SvImJ_G0024927.1 mouse_genomes_project 19 10615838 10616744 - MGP_129S1SvImJ_P0051257 Olfr1458 protein_coding protein_coding MGP_129S1SvImJ_T0051498.1 MGP_129S1SvImJ_G0025029.1 mouse_genomes_project 19 28408378 28446643 + MGP_129S1SvImJ_P0051498 Il33 protein_coding protein_coding MGP_129S1SvImJ_T0051499.1 MGP_129S1SvImJ_G0025029.1 mouse_genomes_project 19 28408379 28435367 + MGP_129S1SvImJ_P0051499 Il33 protein_coding protein_coding MGP_129S1SvImJ_T0051500.1 MGP_129S1SvImJ_G0025029.1 mouse_genomes_project 19 28408396 28444899 + MGP_129S1SvImJ_P0051500 Il33 protein_coding protein_coding MGP_129S1SvImJ_T0051501.1 MGP_129S1SvImJ_G0025029.1 mouse_genomes_project 19 28429078 28446629 + MGP_129S1SvImJ_P0051501 Il33 protein_coding protein_coding MGP_129S1SvImJ_T0051502.1 MGP_129S1SvImJ_G0025029.1 mouse_genomes_project 19 28435105 28436432 + MGP_129S1SvImJ_P0051502 Il33 protein_coding protein_coding MGP_129S1SvImJ_T0051492.1 MGP_129S1SvImJ_G0025026.1 mouse_genomes_project 19 28172993 28183501 + MGP_129S1SvImJ_P0051492 Mlana protein_coding protein_coding MGP_129S1SvImJ_T0052104.1 MGP_129S1SvImJ_G0025241.1 mouse_genomes_project 19 52345403 52346535 + MGP_129S1SvImJ_P0052104 Ins1 protein_coding protein_coding MGP_129S1SvImJ_T0013388.1 MGP_129S1SvImJ_G0011477.1 mouse_genomes_project 19 13998671 13999651 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0050585.1 MGP_129S1SvImJ_G0024711.1 mouse_genomes_project 19 2451512 2457184 - MGP_129S1SvImJ_P0050585 Mus81 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050586.1 MGP_129S1SvImJ_G0024711.1 mouse_genomes_project 19 2451999 2457570 - MGP_129S1SvImJ_P0050586 Mus81 protein_coding protein_coding MGP_129S1SvImJ_T0050587.1 MGP_129S1SvImJ_G0024711.1 mouse_genomes_project 19 2452007 2452741 - Mus81 protein_coding retained_intron MGP_129S1SvImJ_T0050588.1 MGP_129S1SvImJ_G0024711.1 mouse_genomes_project 19 2452018 2457103 - Mus81 protein_coding retained_intron MGP_129S1SvImJ_T0050589.1 MGP_129S1SvImJ_G0024711.1 mouse_genomes_project 19 2452020 2453131 - Mus81 protein_coding retained_intron MGP_129S1SvImJ_T0050590.1 MGP_129S1SvImJ_G0024711.1 mouse_genomes_project 19 2452021 2453135 - Mus81 protein_coding retained_intron MGP_129S1SvImJ_T0050591.1 MGP_129S1SvImJ_G0024711.1 mouse_genomes_project 19 2452025 2457453 - MGP_129S1SvImJ_P0050591 Mus81 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050592.1 MGP_129S1SvImJ_G0024711.1 mouse_genomes_project 19 2452857 2454053 - Mus81 protein_coding retained_intron MGP_129S1SvImJ_T0050593.1 MGP_129S1SvImJ_G0024711.1 mouse_genomes_project 19 2453379 2454978 - Mus81 protein_coding processed_transcript MGP_129S1SvImJ_T0050594.1 MGP_129S1SvImJ_G0024711.1 mouse_genomes_project 19 2454655 2457434 - MGP_129S1SvImJ_P0050594 Mus81 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050595.1 MGP_129S1SvImJ_G0024711.1 mouse_genomes_project 19 2456635 2457479 - Mus81 protein_coding retained_intron MGP_129S1SvImJ_T0051811.1 MGP_129S1SvImJ_G0025143.1 mouse_genomes_project 19 41525857 41530141 - MGP_129S1SvImJ_P0051811 Sfrp5 protein_coding protein_coding MGP_129S1SvImJ_T0100892.1 MGP_129S1SvImJ_G0038959.1 mouse_genomes_project 19 8998080 8998130 - Gm24599 snoRNA snoRNA MGP_129S1SvImJ_T0051344.1 MGP_129S1SvImJ_G0024977.1 mouse_genomes_project 19 19420954 19504019 - MGP_129S1SvImJ_P0051344 Gda protein_coding protein_coding MGP_129S1SvImJ_T0051345.1 MGP_129S1SvImJ_G0024977.1 mouse_genomes_project 19 19448665 19504117 - Gda protein_coding retained_intron MGP_129S1SvImJ_T0098741.1 MGP_129S1SvImJ_G0036826.1 mouse_genomes_project 19 9081539 9081615 + Gm25443 scaRNA scaRNA MGP_129S1SvImJ_T0052189.1 MGP_129S1SvImJ_G0025265.1 mouse_genomes_project 19 56889119 56908090 - MGP_129S1SvImJ_P0052189 Dclre1a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052190.1 MGP_129S1SvImJ_G0025265.1 mouse_genomes_project 19 56889121 56907108 - Dclre1a protein_coding retained_intron MGP_129S1SvImJ_T0052191.1 MGP_129S1SvImJ_G0025265.1 mouse_genomes_project 19 56889121 56908161 - MGP_129S1SvImJ_P0052191 Dclre1a protein_coding protein_coding MGP_129S1SvImJ_T0052192.1 MGP_129S1SvImJ_G0025265.1 mouse_genomes_project 19 56889534 56897335 - Dclre1a protein_coding retained_intron MGP_129S1SvImJ_T0052193.1 MGP_129S1SvImJ_G0025265.1 mouse_genomes_project 19 56899963 56901498 - Dclre1a protein_coding processed_transcript MGP_129S1SvImJ_T0052194.1 MGP_129S1SvImJ_G0025265.1 mouse_genomes_project 19 56906810 56907979 - MGP_129S1SvImJ_P0052194 Dclre1a protein_coding protein_coding MGP_129S1SvImJ_T0007128.1 MGP_129S1SvImJ_G0005851.1 mouse_genomes_project 19 60801169 60802897 + Gm28351 lincRNA lincRNA MGP_129S1SvImJ_T0098556.1 MGP_129S1SvImJ_G0036641.1 mouse_genomes_project 19 50834618 50834655 + Gm25659 rRNA rRNA MGP_129S1SvImJ_T0098848.1 MGP_129S1SvImJ_G0036927.1 mouse_genomes_project 19 56147400 56153463 + Ppnr sense_intronic sense_intronic MGP_129S1SvImJ_T0051274.1 MGP_129S1SvImJ_G0024944.1 mouse_genomes_project 19 11261332 11262292 + MGP_129S1SvImJ_P0051274 Olfr1491 protein_coding protein_coding MGP_129S1SvImJ_T0050716.1 MGP_129S1SvImJ_G0024748.1 mouse_genomes_project 19 3136492 3146451 + MGP_129S1SvImJ_P0050716 Naaladl1 protein_coding protein_coding MGP_129S1SvImJ_T0050608.1 MGP_129S1SvImJ_G0024720.1 mouse_genomes_project 19 2636329 2648837 - MGP_129S1SvImJ_P0050608 Sipa1 protein_coding protein_coding MGP_129S1SvImJ_T0050609.1 MGP_129S1SvImJ_G0024720.1 mouse_genomes_project 19 2636329 2648837 - MGP_129S1SvImJ_P0050609 Sipa1 protein_coding protein_coding MGP_129S1SvImJ_T0050610.1 MGP_129S1SvImJ_G0024720.1 mouse_genomes_project 19 2636329 2648837 - MGP_129S1SvImJ_P0050610 Sipa1 protein_coding protein_coding MGP_129S1SvImJ_T0050611.1 MGP_129S1SvImJ_G0024720.1 mouse_genomes_project 19 2636329 2648837 - MGP_129S1SvImJ_P0050611 Sipa1 protein_coding protein_coding MGP_129S1SvImJ_T0051646.1 MGP_129S1SvImJ_G0025086.1 mouse_genomes_project 19 37068577 37089485 + MGP_129S1SvImJ_P0051646 Cep55 protein_coding protein_coding MGP_129S1SvImJ_T0051647.1 MGP_129S1SvImJ_G0025086.1 mouse_genomes_project 19 37068592 37088558 + MGP_129S1SvImJ_P0051647 Cep55 protein_coding protein_coding MGP_129S1SvImJ_T0051648.1 MGP_129S1SvImJ_G0025086.1 mouse_genomes_project 19 37068594 37089485 + MGP_129S1SvImJ_P0051648 Cep55 protein_coding protein_coding MGP_129S1SvImJ_T0010329.1 MGP_129S1SvImJ_G0008445.1 mouse_genomes_project 19 41608526 41608623 + Gm26339 miRNA miRNA MGP_129S1SvImJ_T0051267.1 MGP_129S1SvImJ_G0024937.1 mouse_genomes_project 19 10972069 10973014 - MGP_129S1SvImJ_P0051267 Olfr1472 protein_coding protein_coding MGP_129S1SvImJ_T0003896.1 MGP_129S1SvImJ_G0003486.1 mouse_genomes_project 19 47430053 47444777 - Gm16068 antisense antisense MGP_129S1SvImJ_T0051898.1 MGP_129S1SvImJ_G0025172.1 mouse_genomes_project 19 44014558 44045799 - MGP_129S1SvImJ_P0051898 Sec31b protein_coding protein_coding MGP_129S1SvImJ_T0051899.1 MGP_129S1SvImJ_G0025172.1 mouse_genomes_project 19 44016296 44019261 - MGP_129S1SvImJ_P0051899 Sec31b protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0011499.1 MGP_129S1SvImJ_G0009615.1 mouse_genomes_project 19 28780415 28780698 + Gm24883 misc_RNA misc_RNA MGP_129S1SvImJ_T0052252.1 MGP_129S1SvImJ_G0025279.1 mouse_genomes_project 19 59216380 59231590 + MGP_129S1SvImJ_P0052252 Pnliprp1 protein_coding protein_coding MGP_129S1SvImJ_T0050291.1 MGP_129S1SvImJ_G0024624.1 mouse_genomes_project 19 146179 155459 + MGP_129S1SvImJ_P0050291 Mtl5 protein_coding protein_coding MGP_129S1SvImJ_T0050292.1 MGP_129S1SvImJ_G0024624.1 mouse_genomes_project 19 146244 164393 + MGP_129S1SvImJ_P0050292 Mtl5 protein_coding protein_coding MGP_129S1SvImJ_T0051005.1 MGP_129S1SvImJ_G0024810.1 mouse_genomes_project 19 6083460 6085785 + MGP_129S1SvImJ_P0051005 Zbtb3 protein_coding protein_coding MGP_129S1SvImJ_T0051251.1 MGP_129S1SvImJ_G0024921.1 mouse_genomes_project 19 10439470 10440418 + MGP_129S1SvImJ_P0051251 Olfr1449 protein_coding protein_coding MGP_129S1SvImJ_T0050961.1 MGP_129S1SvImJ_G0024805.1 mouse_genomes_project 19 6012717 6013225 + MGP_129S1SvImJ_P0050961 1700092M07Rik protein_coding protein_coding MGP_129S1SvImJ_T0050962.1 MGP_129S1SvImJ_G0024805.1 mouse_genomes_project 19 6012761 6013224 + 1700092M07Rik protein_coding retained_intron MGP_129S1SvImJ_T0050535.1 MGP_129S1SvImJ_G0024691.1 mouse_genomes_project 19 2015598 2019934 + MGP_129S1SvImJ_P0050535 Yif1a protein_coding protein_coding MGP_129S1SvImJ_T0017746.1 MGP_129S1SvImJ_G0015387.1 mouse_genomes_project 19 35504102 35598538 - 1500017E21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017747.1 MGP_129S1SvImJ_G0015387.1 mouse_genomes_project 19 35509832 35581507 - 1500017E21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017748.1 MGP_129S1SvImJ_G0015387.1 mouse_genomes_project 19 35509844 35516438 - 1500017E21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017749.1 MGP_129S1SvImJ_G0015387.1 mouse_genomes_project 19 35509849 35516418 - 1500017E21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017750.1 MGP_129S1SvImJ_G0015387.1 mouse_genomes_project 19 35535557 35549683 - 1500017E21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017751.1 MGP_129S1SvImJ_G0015387.1 mouse_genomes_project 19 35537694 35581301 - 1500017E21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017752.1 MGP_129S1SvImJ_G0015387.1 mouse_genomes_project 19 35549526 35581360 - 1500017E21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017753.1 MGP_129S1SvImJ_G0015387.1 mouse_genomes_project 19 35549695 35581356 - 1500017E21Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0051676.1 MGP_129S1SvImJ_G0025096.1 mouse_genomes_project 19 38038577 38084354 + MGP_129S1SvImJ_P0051676 Hells protein_coding protein_coding MGP_129S1SvImJ_T0051677.1 MGP_129S1SvImJ_G0025096.1 mouse_genomes_project 19 38038692 38050689 + Hells protein_coding retained_intron MGP_129S1SvImJ_T0051678.1 MGP_129S1SvImJ_G0025096.1 mouse_genomes_project 19 38038836 38054107 + MGP_129S1SvImJ_P0051678 Hells protein_coding protein_coding MGP_129S1SvImJ_T0051679.1 MGP_129S1SvImJ_G0025096.1 mouse_genomes_project 19 38039052 38065454 + Hells protein_coding processed_transcript MGP_129S1SvImJ_T0051680.1 MGP_129S1SvImJ_G0025096.1 mouse_genomes_project 19 38042170 38050790 + Hells protein_coding retained_intron MGP_129S1SvImJ_T0051681.1 MGP_129S1SvImJ_G0025096.1 mouse_genomes_project 19 38053881 38060668 + Hells protein_coding processed_transcript MGP_129S1SvImJ_T0052119.1 MGP_129S1SvImJ_G0025244.1 mouse_genomes_project 19 53451203 53526410 + MGP_129S1SvImJ_P0052119 Mxi1 protein_coding protein_coding MGP_129S1SvImJ_T0052120.1 MGP_129S1SvImJ_G0025244.1 mouse_genomes_project 19 53477325 53523898 + MGP_129S1SvImJ_P0052120 Mxi1 protein_coding protein_coding MGP_129S1SvImJ_T0050877.1 MGP_129S1SvImJ_G0024777.1 mouse_genomes_project 19 4076348 4083046 - MGP_129S1SvImJ_P0050877 Vegfb protein_coding protein_coding MGP_129S1SvImJ_T0050878.1 MGP_129S1SvImJ_G0024777.1 mouse_genomes_project 19 4076348 4083024 - MGP_129S1SvImJ_P0050878 Vegfb protein_coding protein_coding MGP_129S1SvImJ_T0050879.1 MGP_129S1SvImJ_G0024777.1 mouse_genomes_project 19 4081788 4082535 - Vegfb protein_coding retained_intron MGP_129S1SvImJ_T0051849.1 MGP_129S1SvImJ_G0025156.1 mouse_genomes_project 19 43150708 43173556 - MGP_129S1SvImJ_P0051849 Cox15 protein_coding protein_coding MGP_129S1SvImJ_T0051850.1 MGP_129S1SvImJ_G0025156.1 mouse_genomes_project 19 43156199 43159223 - Cox15 protein_coding retained_intron MGP_129S1SvImJ_T0099651.1 MGP_129S1SvImJ_G0037718.1 mouse_genomes_project 19 61798743 61798859 - Gm22365 snRNA snRNA MGP_129S1SvImJ_T0051140.1 MGP_129S1SvImJ_G0024862.1 mouse_genomes_project 19 8295325 8297329 - MGP_129S1SvImJ_P0051140 Zp1 protein_coding protein_coding MGP_129S1SvImJ_T0051141.1 MGP_129S1SvImJ_G0024862.1 mouse_genomes_project 19 8295327 8301663 - MGP_129S1SvImJ_P0051141 Zp1 protein_coding protein_coding MGP_129S1SvImJ_T0010315.1 MGP_129S1SvImJ_G0008431.1 mouse_genomes_project 19 20841012 20841080 + Mir204 miRNA miRNA MGP_129S1SvImJ_T0052257.1 MGP_129S1SvImJ_G0025283.1 mouse_genomes_project 19 59437451 59468057 + MGP_129S1SvImJ_P0052257 Eno4 protein_coding protein_coding MGP_129S1SvImJ_T0052258.1 MGP_129S1SvImJ_G0025283.1 mouse_genomes_project 19 59437451 59468059 + MGP_129S1SvImJ_P0052258 Eno4 protein_coding protein_coding MGP_129S1SvImJ_T0052259.1 MGP_129S1SvImJ_G0025283.1 mouse_genomes_project 19 59448694 59468055 + MGP_129S1SvImJ_P0052259 Eno4 protein_coding protein_coding MGP_129S1SvImJ_T0052260.1 MGP_129S1SvImJ_G0025283.1 mouse_genomes_project 19 59450968 59467571 + MGP_129S1SvImJ_P0052260 Eno4 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0099631.1 MGP_129S1SvImJ_G0037698.1 mouse_genomes_project 19 12365236 12365359 - Gm26026 snRNA snRNA MGP_129S1SvImJ_T0099629.1 MGP_129S1SvImJ_G0037696.1 mouse_genomes_project 19 10145862 10145969 + Gm24521 snRNA snRNA MGP_129S1SvImJ_T0051443.1 MGP_129S1SvImJ_G0025012.1 mouse_genomes_project 19 27261866 27306250 + Slc1a1 protein_coding retained_intron MGP_129S1SvImJ_T0051444.1 MGP_129S1SvImJ_G0025012.1 mouse_genomes_project 19 27261891 27343031 + MGP_129S1SvImJ_P0051444 Slc1a1 protein_coding protein_coding MGP_129S1SvImJ_T0051445.1 MGP_129S1SvImJ_G0025012.1 mouse_genomes_project 19 27261952 27335018 + Slc1a1 protein_coding retained_intron MGP_129S1SvImJ_T0051446.1 MGP_129S1SvImJ_G0025012.1 mouse_genomes_project 19 27319813 27340948 + Slc1a1 protein_coding retained_intron MGP_129S1SvImJ_T0051448.1 MGP_129S1SvImJ_G0025012.1 mouse_genomes_project 19 27322705 27341709 + Slc1a1 protein_coding retained_intron MGP_129S1SvImJ_T0050568.1 MGP_129S1SvImJ_G0024708.1 mouse_genomes_project 19 2429844 2434289 + MGP_129S1SvImJ_P0050568 Fibp protein_coding protein_coding MGP_129S1SvImJ_T0050569.1 MGP_129S1SvImJ_G0024708.1 mouse_genomes_project 19 2429931 2434294 + MGP_129S1SvImJ_P0050569 Fibp protein_coding unknown_likely_coding MGP_129S1SvImJ_T0003899.1 MGP_129S1SvImJ_G0003489.1 mouse_genomes_project 19 58673167 58705043 + Gm16277 antisense antisense MGP_129S1SvImJ_T0051745.1 MGP_129S1SvImJ_G0025118.1 mouse_genomes_project 19 40285981 40318831 + MGP_129S1SvImJ_P0051745 Dntt protein_coding protein_coding MGP_129S1SvImJ_T0051746.1 MGP_129S1SvImJ_G0025118.1 mouse_genomes_project 19 40285981 40318831 + MGP_129S1SvImJ_P0051746 Dntt protein_coding protein_coding MGP_129S1SvImJ_T0051418.1 MGP_129S1SvImJ_G0025007.1 mouse_genomes_project 19 25573820 25608658 + Vldlr protein_coding retained_intron MGP_129S1SvImJ_T0051419.1 MGP_129S1SvImJ_G0025007.1 mouse_genomes_project 19 25574356 25608765 + MGP_129S1SvImJ_P0051419 Vldlr protein_coding protein_coding MGP_129S1SvImJ_T0051420.1 MGP_129S1SvImJ_G0025007.1 mouse_genomes_project 19 25574356 25592191 + MGP_129S1SvImJ_P0051420 Vldlr protein_coding protein_coding MGP_129S1SvImJ_T0051421.1 MGP_129S1SvImJ_G0025007.1 mouse_genomes_project 19 25574693 25589106 + Vldlr protein_coding processed_transcript MGP_129S1SvImJ_T0051422.1 MGP_129S1SvImJ_G0025007.1 mouse_genomes_project 19 25574693 25613134 + MGP_129S1SvImJ_P0051422 Vldlr protein_coding protein_coding MGP_129S1SvImJ_T0051423.1 MGP_129S1SvImJ_G0025007.1 mouse_genomes_project 19 25574693 25608630 + MGP_129S1SvImJ_P0051423 Vldlr protein_coding protein_coding MGP_129S1SvImJ_T0051424.1 MGP_129S1SvImJ_G0025007.1 mouse_genomes_project 19 25574794 25608666 + MGP_129S1SvImJ_P0051424 Vldlr protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051425.1 MGP_129S1SvImJ_G0025007.1 mouse_genomes_project 19 25596108 25602732 + MGP_129S1SvImJ_P0051425 Vldlr protein_coding protein_coding MGP_129S1SvImJ_T0007093.1 MGP_129S1SvImJ_G0005826.1 mouse_genomes_project 19 33217622 33219433 + Gm26902 lincRNA lincRNA MGP_129S1SvImJ_T0007094.1 MGP_129S1SvImJ_G0005826.1 mouse_genomes_project 19 33217647 33224325 + Gm26902 lincRNA lincRNA MGP_129S1SvImJ_T0050764.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3390437 3404911 + Map4k2 protein_coding retained_intron MGP_129S1SvImJ_T0050765.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3390457 3391958 + MGP_129S1SvImJ_P0050765 Map4k2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050766.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3390462 3404914 + MGP_129S1SvImJ_P0050766 Map4k2 protein_coding protein_coding MGP_129S1SvImJ_T0050767.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3390493 3391298 + Map4k2 protein_coding processed_transcript MGP_129S1SvImJ_T0050768.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3390510 3404600 + MGP_129S1SvImJ_P0050768 Map4k2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050769.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3390518 3392176 + Map4k2 protein_coding retained_intron MGP_129S1SvImJ_T0050770.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3390526 3395040 + MGP_129S1SvImJ_P0050770 Map4k2 protein_coding protein_coding MGP_129S1SvImJ_T0050771.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3390552 3402826 + MGP_129S1SvImJ_P0050771 Map4k2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050772.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3390572 3392825 + Map4k2 protein_coding retained_intron MGP_129S1SvImJ_T0050773.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3390720 3393156 + Map4k2 protein_coding processed_transcript MGP_129S1SvImJ_T0050774.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3390751 3392823 + Map4k2 protein_coding processed_transcript MGP_129S1SvImJ_T0050775.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3390773 3392823 + Map4k2 protein_coding retained_intron MGP_129S1SvImJ_T0050776.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3391080 3401185 + Map4k2 protein_coding retained_intron MGP_129S1SvImJ_T0050777.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3391838 3392147 + Map4k2 protein_coding retained_intron MGP_129S1SvImJ_T0050778.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3392817 3393945 + Map4k2 protein_coding retained_intron MGP_129S1SvImJ_T0050779.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3394647 3395591 + Map4k2 protein_coding retained_intron MGP_129S1SvImJ_T0050780.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3395846 3403139 + Map4k2 protein_coding retained_intron MGP_129S1SvImJ_T0050781.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3395966 3400957 + Map4k2 protein_coding processed_transcript MGP_129S1SvImJ_T0050782.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3395989 3403137 + MGP_129S1SvImJ_P0050782 Map4k2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050783.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3400206 3400878 + Map4k2 protein_coding retained_intron MGP_129S1SvImJ_T0050784.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3401918 3404741 + Map4k2 protein_coding processed_transcript MGP_129S1SvImJ_T0050785.1 MGP_129S1SvImJ_G0024760.1 mouse_genomes_project 19 3402073 3402932 + Map4k2 protein_coding processed_transcript MGP_129S1SvImJ_T0051381.1 MGP_129S1SvImJ_G0024996.1 mouse_genomes_project 19 22928499 22934192 + MGP_129S1SvImJ_P0051381 Tmem252 protein_coding protein_coding MGP_129S1SvImJ_T0050424.1 MGP_129S1SvImJ_G0024653.1 mouse_genomes_project 19 1004773 1015929 - MGP_129S1SvImJ_P0050424 Carns1 protein_coding protein_coding MGP_129S1SvImJ_T0052053.1 MGP_129S1SvImJ_G0025224.1 mouse_genomes_project 19 46882993 46915844 - MGP_129S1SvImJ_P0052053 Calhm2 protein_coding protein_coding MGP_129S1SvImJ_T0052054.1 MGP_129S1SvImJ_G0025224.1 mouse_genomes_project 19 46909345 46915844 - MGP_129S1SvImJ_P0052054 Calhm2 protein_coding protein_coding MGP_129S1SvImJ_T0003870.1 MGP_129S1SvImJ_G0003468.1 mouse_genomes_project 19 3404820 3414351 - Gm14966 antisense antisense MGP_129S1SvImJ_T0003871.1 MGP_129S1SvImJ_G0003468.1 mouse_genomes_project 19 3404896 3414575 - Gm14966 antisense antisense MGP_129S1SvImJ_T0052082.1 MGP_129S1SvImJ_G0025233.1 mouse_genomes_project 19 47565163 47570714 + MGP_129S1SvImJ_P0052082 Sfr1 protein_coding protein_coding MGP_129S1SvImJ_T0052145.1 MGP_129S1SvImJ_G0025256.1 mouse_genomes_project 19 55461452 55504774 - MGP_129S1SvImJ_P0052145 Gucy2g protein_coding protein_coding MGP_129S1SvImJ_T0051825.1 MGP_129S1SvImJ_G0025148.1 mouse_genomes_project 19 42074149 42106811 - MGP_129S1SvImJ_P0051825 Pyroxd2 protein_coding protein_coding MGP_129S1SvImJ_T0051217.1 MGP_129S1SvImJ_G0024902.1 mouse_genomes_project 19 9855007 9855955 + MGP_129S1SvImJ_P0051217 Olfr1440 protein_coding protein_coding MGP_129S1SvImJ_T0051553.1 MGP_129S1SvImJ_G0025049.1 mouse_genomes_project 19 32690925 32706644 + MGP_129S1SvImJ_P0051553 Lipf protein_coding protein_coding MGP_129S1SvImJ_T0051633.1 MGP_129S1SvImJ_G0025079.1 mouse_genomes_project 19 36212682 36313914 - MGP_129S1SvImJ_P0051633 Ide protein_coding protein_coding MGP_129S1SvImJ_T0051634.1 MGP_129S1SvImJ_G0025079.1 mouse_genomes_project 19 36214379 36252457 - Ide protein_coding processed_transcript MGP_129S1SvImJ_T0051635.1 MGP_129S1SvImJ_G0025079.1 mouse_genomes_project 19 36224531 36234831 - Ide protein_coding retained_intron MGP_129S1SvImJ_T0051636.1 MGP_129S1SvImJ_G0025079.1 mouse_genomes_project 19 36248411 36258638 - Ide protein_coding processed_transcript MGP_129S1SvImJ_T0051637.1 MGP_129S1SvImJ_G0025079.1 mouse_genomes_project 19 36248715 36283756 - Ide protein_coding retained_intron MGP_129S1SvImJ_T0100903.1 MGP_129S1SvImJ_G0038970.1 mouse_genomes_project 19 34597025 34597158 - Gm25611 snoRNA snoRNA MGP_129S1SvImJ_T0050647.1 MGP_129S1SvImJ_G0024731.1 mouse_genomes_project 19 2897111 2900080 - MGP_129S1SvImJ_P0050647 Tigd3 protein_coding protein_coding MGP_129S1SvImJ_T0051887.1 MGP_129S1SvImJ_G0025166.1 mouse_genomes_project 19 43600874 43648392 - MGP_129S1SvImJ_P0051887 Pkd2l1 protein_coding protein_coding MGP_129S1SvImJ_T0051888.1 MGP_129S1SvImJ_G0025166.1 mouse_genomes_project 19 43600875 43648392 - Pkd2l1 protein_coding retained_intron MGP_129S1SvImJ_T0051889.1 MGP_129S1SvImJ_G0025166.1 mouse_genomes_project 19 43601744 43651138 - MGP_129S1SvImJ_P0051889 Pkd2l1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0051890.1 MGP_129S1SvImJ_G0025167.1 mouse_genomes_project 19 43660296 43700142 + MGP_129S1SvImJ_P0051890 Scd3 protein_coding protein_coding MGP_129S1SvImJ_T0051891.1 MGP_129S1SvImJ_G0025167.1 mouse_genomes_project 19 43672273 43698140 + MGP_129S1SvImJ_P0051891 Scd3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0050857.1 MGP_129S1SvImJ_G0024770.1 mouse_genomes_project 19 4000722 4011333 - MGP_129S1SvImJ_P0050857 Esrra protein_coding protein_coding MGP_129S1SvImJ_T0050858.1 MGP_129S1SvImJ_G0024770.1 mouse_genomes_project 19 4002197 4011286 - MGP_129S1SvImJ_P0050858 Esrra protein_coding protein_coding MGP_129S1SvImJ_T0050859.1 MGP_129S1SvImJ_G0024770.1 mouse_genomes_project 19 4002510 4011338 - Esrra protein_coding processed_transcript MGP_129S1SvImJ_T0050860.1 MGP_129S1SvImJ_G0024770.1 mouse_genomes_project 19 4009429 4011292 - Esrra protein_coding retained_intron MGP_129S1SvImJ_T0050861.1 MGP_129S1SvImJ_G0024770.1 mouse_genomes_project 19 4009603 4010576 - MGP_129S1SvImJ_P0050861 Esrra protein_coding protein_coding MGP_129S1SvImJ_T0051928.1 MGP_129S1SvImJ_G0025184.1 mouse_genomes_project 19 44623939 44628242 + MGP_129S1SvImJ_P0051928 Kazald1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0013405.1 MGP_129S1SvImJ_G0011494.1 mouse_genomes_project 19 39831935 39832693 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0051459.1 MGP_129S1SvImJ_G0025016.1 mouse_genomes_project 19 27452186 27481486 - MGP_129S1SvImJ_P0051459 Ak3 protein_coding protein_coding MGP_129S1SvImJ_T0051460.1 MGP_129S1SvImJ_G0025016.1 mouse_genomes_project 19 27457254 27458598 - MGP_129S1SvImJ_P0051460 Ak3 protein_coding protein_coding MGP_129S1SvImJ_T0051417.1 MGP_129S1SvImJ_G0025006.1 mouse_genomes_project 19 25238629 25241331 + MGP_129S1SvImJ_P0051417 Gm815 protein_coding protein_coding MGP_129S1SvImJ_T0051011.1 MGP_129S1SvImJ_G0024813.1 mouse_genomes_project 19 6119942 6122260 - MGP_129S1SvImJ_P0051011 Gng3 protein_coding protein_coding MGP_129S1SvImJ_T0017735.1 MGP_129S1SvImJ_G0015382.1 mouse_genomes_project 19 8100200 8157489 + A430093F15Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017736.1 MGP_129S1SvImJ_G0015382.1 mouse_genomes_project 19 8100204 8157480 + A430093F15Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017737.1 MGP_129S1SvImJ_G0015382.1 mouse_genomes_project 19 8100213 8157123 + A430093F15Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017738.1 MGP_129S1SvImJ_G0015382.1 mouse_genomes_project 19 8109759 8122952 + A430093F15Rik processed_transcript retained_intron MGP_129S1SvImJ_T0017739.1 MGP_129S1SvImJ_G0015382.1 mouse_genomes_project 19 8153360 8157485 + A430093F15Rik processed_transcript lincRNA MGP_129S1SvImJ_T0017740.1 MGP_129S1SvImJ_G0015382.1 mouse_genomes_project 19 8156797 8157482 + A430093F15Rik processed_transcript retained_intron MGP_129S1SvImJ_T0051143.1 MGP_129S1SvImJ_G0024864.1 mouse_genomes_project 19 8323901 8329753 - Ccdc86 protein_coding processed_transcript MGP_129S1SvImJ_T0051144.1 MGP_129S1SvImJ_G0024864.1 mouse_genomes_project 19 8323901 8331627 - MGP_129S1SvImJ_P0051144 Ccdc86 protein_coding protein_coding MGP_129S1SvImJ_T0051145.1 MGP_129S1SvImJ_G0024864.1 mouse_genomes_project 19 8327927 8331612 - Ccdc86 protein_coding retained_intron MGP_129S1SvImJ_T0001041.1 MGP_129S1SvImJ_G0000970.1 mouse_genomes_project 19 12301707 12301974 + TEC TEC MGP_129S1SvImJ_T0051965.1 MGP_129S1SvImJ_G0025195.1 mouse_genomes_project 19 45448920 45652448 - MGP_129S1SvImJ_P0051965 9130011E15Rik protein_coding protein_coding MGP_129S1SvImJ_T0052203.1 MGP_129S1SvImJ_G0025269.1 mouse_genomes_project 19 57206170 57250627 + MGP_129S1SvImJ_P0052203 Tdrd1 protein_coding protein_coding MGP_129S1SvImJ_T0052204.1 MGP_129S1SvImJ_G0025269.1 mouse_genomes_project 19 57206236 57250627 + MGP_129S1SvImJ_P0052204 Tdrd1 protein_coding protein_coding MGP_129S1SvImJ_T0052205.1 MGP_129S1SvImJ_G0025269.1 mouse_genomes_project 19 57206247 57250627 + MGP_129S1SvImJ_P0052205 Tdrd1 protein_coding protein_coding MGP_129S1SvImJ_T0052206.1 MGP_129S1SvImJ_G0025269.1 mouse_genomes_project 19 57210682 57250627 + MGP_129S1SvImJ_P0052206 Tdrd1 protein_coding protein_coding MGP_129S1SvImJ_T0051695.1 MGP_129S1SvImJ_G0025106.1 mouse_genomes_project 19 38717232 38885462 - MGP_129S1SvImJ_P0051695 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051696.1 MGP_129S1SvImJ_G0025106.1 mouse_genomes_project 19 38882084 38885392 - MGP_129S1SvImJ_P0051696 protein_coding protein_coding MGP_129S1SvImJ_T0007125.1 MGP_129S1SvImJ_G0005850.1 mouse_genomes_project 19 60697397 60716877 + E330013P04Rik lincRNA lincRNA MGP_129S1SvImJ_T0007126.1 MGP_129S1SvImJ_G0005850.1 mouse_genomes_project 19 60697426 60705771 + E330013P04Rik lincRNA lincRNA MGP_129S1SvImJ_T0007127.1 MGP_129S1SvImJ_G0005850.1 mouse_genomes_project 19 60703975 60710009 + E330013P04Rik lincRNA lincRNA MGP_129S1SvImJ_T0100901.1 MGP_129S1SvImJ_G0038968.1 mouse_genomes_project 19 26077877 26078009 - Gm24782 snoRNA snoRNA MGP_129S1SvImJ_T0051514.1 MGP_129S1SvImJ_G0025033.1 mouse_genomes_project 19 28739567 28749772 + MGP_129S1SvImJ_P0051514 Mbl2 protein_coding protein_coding MGP_129S1SvImJ_T0007095.1 MGP_129S1SvImJ_G0005827.1 mouse_genomes_project 19 33846093 33850139 - Gm5248 lincRNA lincRNA MGP_129S1SvImJ_T0010342.1 MGP_129S1SvImJ_G0008458.1 mouse_genomes_project 19 58514376 58514446 + Mir5623 miRNA miRNA MGP_129S1SvImJ_T0013373.1 MGP_129S1SvImJ_G0011462.1 mouse_genomes_project 19 3072276 3072408 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0011497.1 MGP_129S1SvImJ_G0009613.1 mouse_genomes_project 19 14864448 14864709 - Gm27796 misc_RNA misc_RNA MGP_129S1SvImJ_T0050750.1 MGP_129S1SvImJ_G0024758.1 mouse_genomes_project 19 3354259 3373455 + MGP_129S1SvImJ_P0050750 Cdc42bpg protein_coding protein_coding MGP_129S1SvImJ_T0050751.1 MGP_129S1SvImJ_G0024758.1 mouse_genomes_project 19 3369610 3370035 + Cdc42bpg protein_coding retained_intron MGP_129S1SvImJ_T0102373.1 MGP_129S1SvImJ_G0040207.1 mouse_genomes_project 19 9686974 9696158 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0050536.1 MGP_129S1SvImJ_G0024692.1 mouse_genomes_project 19 2019925 2025459 - MGP_129S1SvImJ_P0050536 Cnih2 protein_coding protein_coding MGP_129S1SvImJ_T0051910.1 MGP_129S1SvImJ_G0025175.1 mouse_genomes_project 19 44064425 44065530 + Hif1an protein_coding retained_intron MGP_129S1SvImJ_T0051911.1 MGP_129S1SvImJ_G0025175.1 mouse_genomes_project 19 44064425 44077831 + MGP_129S1SvImJ_P0051911 Hif1an protein_coding protein_coding MGP_129S1SvImJ_T0052121.1 MGP_129S1SvImJ_G0025245.1 mouse_genomes_project 19 53522170 53522371 - MGP_129S1SvImJ_P0052121 Gm10197 protein_coding protein_coding MGP_129S1SvImJ_T0050864.1 MGP_129S1SvImJ_G0024773.1 mouse_genomes_project 19 4031071 4034510 - MGP_129S1SvImJ_P0050864 Gpr137 protein_coding protein_coding MGP_129S1SvImJ_T0050865.1 MGP_129S1SvImJ_G0024773.1 mouse_genomes_project 19 4031072 4034196 - MGP_129S1SvImJ_P0050865 Gpr137 protein_coding protein_coding MGP_129S1SvImJ_T0050866.1 MGP_129S1SvImJ_G0024773.1 mouse_genomes_project 19 4031072 4035453 - MGP_129S1SvImJ_P0050866 Gpr137 protein_coding protein_coding MGP_129S1SvImJ_T0050867.1 MGP_129S1SvImJ_G0024773.1 mouse_genomes_project 19 4031072 4034196 - MGP_129S1SvImJ_P0050867 Gpr137 protein_coding protein_coding MGP_129S1SvImJ_T0050868.1 MGP_129S1SvImJ_G0024773.1 mouse_genomes_project 19 4031072 4034482 - MGP_129S1SvImJ_P0050868 Gpr137 protein_coding protein_coding MGP_129S1SvImJ_T0050489.1 MGP_129S1SvImJ_G0024673.1 mouse_genomes_project 19 1679380 1690452 - MGP_129S1SvImJ_P0050489 protein_coding protein_coding MGP_129S1SvImJ_T0050492.1 MGP_129S1SvImJ_G0024673.1 mouse_genomes_project 19 1680240 1690402 - MGP_129S1SvImJ_P0050492 protein_coding protein_coding MGP_129S1SvImJ_T0050493.1 MGP_129S1SvImJ_G0024673.1 mouse_genomes_project 19 1680362 1690451 - MGP_129S1SvImJ_P0050493 protein_coding protein_coding MGP_129S1SvImJ_T0050495.1 MGP_129S1SvImJ_G0024673.1 mouse_genomes_project 19 1682860 1690411 - MGP_129S1SvImJ_P0050495 protein_coding protein_coding MGP_129S1SvImJ_T0050496.1 MGP_129S1SvImJ_G0024673.1 mouse_genomes_project 19 1685155 1690434 - protein_coding retained_intron MGP_129S1SvImJ_T0050702.1 MGP_129S1SvImJ_G0024745.1 mouse_genomes_project 19 3109225 3109978 + MGP_129S1SvImJ_P0050702 Tmem262 protein_coding protein_coding MGP_129S1SvImJ_T0050703.1 MGP_129S1SvImJ_G0024745.1 mouse_genomes_project 19 3109225 3109981 + MGP_129S1SvImJ_P0050703 Tmem262 protein_coding protein_coding MGP_129S1SvImJ_T0052273.1 MGP_129S1SvImJ_G0025291.1 mouse_genomes_project 19 60756829 60784816 - MGP_129S1SvImJ_P0052273 Fam204a protein_coding protein_coding MGP_129S1SvImJ_T0051104.1 MGP_129S1SvImJ_G0024849.1 mouse_genomes_project 19 7918855 7925740 - MGP_129S1SvImJ_P0051104 Tmem138 protein_coding protein_coding MGP_129S1SvImJ_T0051618.1 MGP_129S1SvImJ_G0025077.1 mouse_genomes_project 19 35949325 36148526 - MGP_129S1SvImJ_P0051618 Cpeb3 protein_coding protein_coding MGP_129S1SvImJ_T0051619.1 MGP_129S1SvImJ_G0025077.1 mouse_genomes_project 19 35949331 36112208 - MGP_129S1SvImJ_P0051619 Cpeb3 protein_coding protein_coding MGP_129S1SvImJ_T0051620.1 MGP_129S1SvImJ_G0025077.1 mouse_genomes_project 19 35949913 36114176 - MGP_129S1SvImJ_P0051620 Cpeb3 protein_coding protein_coding MGP_129S1SvImJ_T0051621.1 MGP_129S1SvImJ_G0025077.1 mouse_genomes_project 19 35949913 36148526 - MGP_129S1SvImJ_P0051621 Cpeb3 protein_coding protein_coding MGP_129S1SvImJ_T0051622.1 MGP_129S1SvImJ_G0025077.1 mouse_genomes_project 19 35951004 36148537 - MGP_129S1SvImJ_P0051622 Cpeb3 protein_coding protein_coding MGP_129S1SvImJ_T0051623.1 MGP_129S1SvImJ_G0025077.1 mouse_genomes_project 19 35951970 36148357 - MGP_129S1SvImJ_P0051623 Cpeb3 protein_coding protein_coding MGP_129S1SvImJ_T0051624.1 MGP_129S1SvImJ_G0025077.1 mouse_genomes_project 19 35952674 36139166 - MGP_129S1SvImJ_P0051624 Cpeb3 protein_coding protein_coding MGP_129S1SvImJ_T0051625.1 MGP_129S1SvImJ_G0025077.1 mouse_genomes_project 19 35983383 36148572 - MGP_129S1SvImJ_P0051625 Cpeb3 protein_coding protein_coding MGP_129S1SvImJ_T0051626.1 MGP_129S1SvImJ_G0025077.1 mouse_genomes_project 19 36112549 36116126 - MGP_129S1SvImJ_P0051626 Cpeb3 protein_coding protein_coding MGP_129S1SvImJ_T0051627.1 MGP_129S1SvImJ_G0025077.1 mouse_genomes_project 19 36112705 36114169 - MGP_129S1SvImJ_P0051627 Cpeb3 protein_coding protein_coding MGP_129S1SvImJ_T0051628.1 MGP_129S1SvImJ_G0025077.1 mouse_genomes_project 19 36112735 36149665 - MGP_129S1SvImJ_P0051628 Cpeb3 protein_coding protein_coding MGP_129S1SvImJ_T0051629.1 MGP_129S1SvImJ_G0025077.1 mouse_genomes_project 19 36112800 36113329 - MGP_129S1SvImJ_P0051629 Cpeb3 protein_coding protein_coding MGP_129S1SvImJ_T0051990.1 MGP_129S1SvImJ_G0025201.1 mouse_genomes_project 19 45807800 45820441 - MGP_129S1SvImJ_P0051990 Pitx3 protein_coding protein_coding MGP_129S1SvImJ_T0051991.1 MGP_129S1SvImJ_G0025201.1 mouse_genomes_project 19 45808610 45809405 - Pitx3 protein_coding retained_intron MGP_129S1SvImJ_T0051992.1 MGP_129S1SvImJ_G0025201.1 mouse_genomes_project 19 45809147 45813113 - MGP_129S1SvImJ_P0051992 Pitx3 protein_coding protein_coding MGP_129S1SvImJ_T0051656.1 MGP_129S1SvImJ_G0025091.1 mouse_genomes_project 19 37303151 37356654 + MGP_129S1SvImJ_P0051656 Lgi1 protein_coding protein_coding MGP_129S1SvImJ_T0051657.1 MGP_129S1SvImJ_G0025091.1 mouse_genomes_project 19 37303182 37351723 + MGP_129S1SvImJ_P0051657 Lgi1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051658.1 MGP_129S1SvImJ_G0025091.1 mouse_genomes_project 19 37303192 37349584 + MGP_129S1SvImJ_P0051658 Lgi1 protein_coding protein_coding MGP_129S1SvImJ_T0051659.1 MGP_129S1SvImJ_G0025091.1 mouse_genomes_project 19 37303261 37349583 + MGP_129S1SvImJ_P0051659 Lgi1 protein_coding protein_coding MGP_129S1SvImJ_T0051660.1 MGP_129S1SvImJ_G0025091.1 mouse_genomes_project 19 37303275 37340883 + MGP_129S1SvImJ_P0051660 Lgi1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051661.1 MGP_129S1SvImJ_G0025091.1 mouse_genomes_project 19 37303286 37349277 + MGP_129S1SvImJ_P0051661 Lgi1 protein_coding protein_coding MGP_129S1SvImJ_T0051662.1 MGP_129S1SvImJ_G0025091.1 mouse_genomes_project 19 37303378 37304515 + Lgi1 protein_coding retained_intron MGP_129S1SvImJ_T0051663.1 MGP_129S1SvImJ_G0025091.1 mouse_genomes_project 19 37303431 37307648 + Lgi1 protein_coding retained_intron MGP_129S1SvImJ_T0051664.1 MGP_129S1SvImJ_G0025091.1 mouse_genomes_project 19 37304010 37344179 + Lgi1 protein_coding retained_intron MGP_129S1SvImJ_T0100905.1 MGP_129S1SvImJ_G0038972.1 mouse_genomes_project 19 42046179 42046305 - Gm25216 snoRNA snoRNA MGP_129S1SvImJ_T0051575.1 MGP_129S1SvImJ_G0025060.1 mouse_genomes_project 19 33329884 33356976 - MGP_129S1SvImJ_P0051575 Ifit1bl1 protein_coding protein_coding MGP_129S1SvImJ_T0051576.1 MGP_129S1SvImJ_G0025060.1 mouse_genomes_project 19 33329887 33354335 - MGP_129S1SvImJ_P0051576 Ifit1bl1 protein_coding protein_coding MGP_129S1SvImJ_T0007068.1 MGP_129S1SvImJ_G0005809.1 mouse_genomes_project 19 2828339 2849098 - Neat1 lincRNA lincRNA MGP_129S1SvImJ_T0007069.1 MGP_129S1SvImJ_G0005809.1 mouse_genomes_project 19 2845926 2849096 - Neat1 lincRNA lincRNA MGP_129S1SvImJ_T0007070.1 MGP_129S1SvImJ_G0005809.1 mouse_genomes_project 19 2847300 2848879 - Neat1 lincRNA lincRNA MGP_129S1SvImJ_T0052098.1 MGP_129S1SvImJ_G0025238.1 mouse_genomes_project 19 48097991 48735046 + MGP_129S1SvImJ_P0052098 Sorcs3 protein_coding protein_coding MGP_129S1SvImJ_T0013375.1 MGP_129S1SvImJ_G0011464.1 mouse_genomes_project 19 3185825 3186657 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0050741.1 MGP_129S1SvImJ_G0024756.1 mouse_genomes_project 19 3286524 3308015 + MGP_129S1SvImJ_P0050741 Atg2a protein_coding protein_coding MGP_129S1SvImJ_T0050742.1 MGP_129S1SvImJ_G0024756.1 mouse_genomes_project 19 3290321 3307975 + MGP_129S1SvImJ_P0050742 Atg2a protein_coding protein_coding MGP_129S1SvImJ_T0050743.1 MGP_129S1SvImJ_G0024756.1 mouse_genomes_project 19 3297115 3297923 + Atg2a protein_coding retained_intron MGP_129S1SvImJ_T0050744.1 MGP_129S1SvImJ_G0024756.1 mouse_genomes_project 19 3301998 3305247 + Atg2a protein_coding retained_intron MGP_129S1SvImJ_T0050745.1 MGP_129S1SvImJ_G0024756.1 mouse_genomes_project 19 3303968 3305812 + Atg2a protein_coding retained_intron MGP_129S1SvImJ_T0098347.1 MGP_129S1SvImJ_G0036432.1 mouse_genomes_project 19 60784452 60785799 + pseudogene pseudogene MGP_129S1SvImJ_T0050432.1 MGP_129S1SvImJ_G0024658.1 mouse_genomes_project 19 1076207 1077940 + MGP_129S1SvImJ_P0050432 Pold4 protein_coding protein_coding MGP_129S1SvImJ_T0007062.1 MGP_129S1SvImJ_G0005807.1 mouse_genomes_project 19 1010015 1014734 + Gm17552 lincRNA lincRNA MGP_129S1SvImJ_T0050403.1 MGP_129S1SvImJ_G0024649.1 mouse_genomes_project 19 977366 983298 + MGP_129S1SvImJ_P0050403 Gpr152 protein_coding protein_coding MGP_129S1SvImJ_T0099635.1 MGP_129S1SvImJ_G0037702.1 mouse_genomes_project 19 21440375 21440482 + Gm24263 snRNA snRNA MGP_129S1SvImJ_T0017710.1 MGP_129S1SvImJ_G0015376.1 mouse_genomes_project 19 2799176 2800164 + Gm20417 processed_transcript processed_transcript MGP_129S1SvImJ_T0100884.1 MGP_129S1SvImJ_G0038951.1 mouse_genomes_project 19 5992683 5992758 + Gm25894 snoRNA snoRNA MGP_129S1SvImJ_T0051607.1 MGP_129S1SvImJ_G0025074.1 mouse_genomes_project 19 35741047 35799968 + MGP_129S1SvImJ_P0051607 Tnks2 protein_coding protein_coding MGP_129S1SvImJ_T0051608.1 MGP_129S1SvImJ_G0025074.1 mouse_genomes_project 19 35741219 35762748 + Tnks2 protein_coding processed_transcript MGP_129S1SvImJ_T0051609.1 MGP_129S1SvImJ_G0025074.1 mouse_genomes_project 19 35756151 35761803 + Tnks2 protein_coding retained_intron MGP_129S1SvImJ_T0051610.1 MGP_129S1SvImJ_G0025074.1 mouse_genomes_project 19 35764308 35769131 + Tnks2 protein_coding retained_intron MGP_129S1SvImJ_T0051611.1 MGP_129S1SvImJ_G0025074.1 mouse_genomes_project 19 35764691 35778951 + MGP_129S1SvImJ_P0051611 Tnks2 protein_coding protein_coding MGP_129S1SvImJ_T0051612.1 MGP_129S1SvImJ_G0025074.1 mouse_genomes_project 19 35765904 35772974 + MGP_129S1SvImJ_P0051612 Tnks2 protein_coding protein_coding MGP_129S1SvImJ_T0051613.1 MGP_129S1SvImJ_G0025074.1 mouse_genomes_project 19 35778238 35790584 + MGP_129S1SvImJ_P0051613 Tnks2 protein_coding protein_coding MGP_129S1SvImJ_T0051614.1 MGP_129S1SvImJ_G0025074.1 mouse_genomes_project 19 35785004 35789579 + Tnks2 protein_coding retained_intron MGP_129S1SvImJ_T0051615.1 MGP_129S1SvImJ_G0025074.1 mouse_genomes_project 19 35787070 35793879 + Tnks2 protein_coding retained_intron MGP_129S1SvImJ_T0099633.1 MGP_129S1SvImJ_G0037700.1 mouse_genomes_project 19 15726129 15726232 - Gm22880 snRNA snRNA MGP_129S1SvImJ_T0013377.1 MGP_129S1SvImJ_G0011466.1 mouse_genomes_project 19 4847332 4848448 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0052013.1 MGP_129S1SvImJ_G0025205.1 mouse_genomes_project 19 46009149 46011419 + MGP_129S1SvImJ_P0052013 Fbxl15 protein_coding protein_coding MGP_129S1SvImJ_T0052014.1 MGP_129S1SvImJ_G0025205.1 mouse_genomes_project 19 46009152 46011418 + MGP_129S1SvImJ_P0052014 Fbxl15 protein_coding protein_coding MGP_129S1SvImJ_T0051797.1 MGP_129S1SvImJ_G0025138.1 mouse_genomes_project 19 41389158 41402230 - MGP_129S1SvImJ_P0051797 Morn4 protein_coding protein_coding MGP_129S1SvImJ_T0051258.1 MGP_129S1SvImJ_G0024928.1 mouse_genomes_project 19 10655894 10656995 - MGP_129S1SvImJ_P0051258 Olfr1459 protein_coding protein_coding MGP_129S1SvImJ_T0051157.1 MGP_129S1SvImJ_G0024870.1 mouse_genomes_project 19 8530365 8559760 - MGP_129S1SvImJ_P0051157 1700025F22Rik protein_coding protein_coding MGP_129S1SvImJ_T0051158.1 MGP_129S1SvImJ_G0024870.1 mouse_genomes_project 19 8530365 8549397 - MGP_129S1SvImJ_P0051158 1700025F22Rik protein_coding protein_coding MGP_129S1SvImJ_T0051159.1 MGP_129S1SvImJ_G0024870.1 mouse_genomes_project 19 8530365 8559746 - MGP_129S1SvImJ_P0051159 1700025F22Rik protein_coding protein_coding MGP_129S1SvImJ_T0051160.1 MGP_129S1SvImJ_G0024870.1 mouse_genomes_project 19 8530365 8559746 - MGP_129S1SvImJ_P0051160 1700025F22Rik protein_coding protein_coding MGP_129S1SvImJ_T0051221.1 MGP_129S1SvImJ_G0024906.1 mouse_genomes_project 19 9926082 9967056 - MGP_129S1SvImJ_P0051221 Dtx4 protein_coding protein_coding MGP_129S1SvImJ_T0050507.1 MGP_129S1SvImJ_G0024679.1 mouse_genomes_project 19 1786694 1794836 + Zdhhc24 protein_coding processed_transcript MGP_129S1SvImJ_T0050508.1 MGP_129S1SvImJ_G0024679.1 mouse_genomes_project 19 1786698 1794836 + MGP_129S1SvImJ_P0050508 Zdhhc24 protein_coding protein_coding MGP_129S1SvImJ_T0050509.1 MGP_129S1SvImJ_G0024679.1 mouse_genomes_project 19 1786716 1794834 + Zdhhc24 protein_coding processed_transcript MGP_129S1SvImJ_T0050510.1 MGP_129S1SvImJ_G0024679.1 mouse_genomes_project 19 1786730 1794835 + MGP_129S1SvImJ_P0050510 Zdhhc24 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050511.1 MGP_129S1SvImJ_G0024679.1 mouse_genomes_project 19 1786749 1791826 + MGP_129S1SvImJ_P0050511 Zdhhc24 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050512.1 MGP_129S1SvImJ_G0024679.1 mouse_genomes_project 19 1787793 1791809 + Zdhhc24 protein_coding processed_transcript MGP_129S1SvImJ_T0051493.1 MGP_129S1SvImJ_G0025027.1 mouse_genomes_project 19 28190365 28232398 - MGP_129S1SvImJ_P0051493 9930021J03Rik protein_coding protein_coding MGP_129S1SvImJ_T0051494.1 MGP_129S1SvImJ_G0025027.1 mouse_genomes_project 19 28191843 28282162 - MGP_129S1SvImJ_P0051494 9930021J03Rik protein_coding protein_coding MGP_129S1SvImJ_T0051495.1 MGP_129S1SvImJ_G0025027.1 mouse_genomes_project 19 28192276 28282020 - MGP_129S1SvImJ_P0051495 9930021J03Rik protein_coding protein_coding MGP_129S1SvImJ_T0051496.1 MGP_129S1SvImJ_G0025027.1 mouse_genomes_project 19 28196990 28232460 - MGP_129S1SvImJ_P0051496 9930021J03Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0010301.1 MGP_129S1SvImJ_G0008417.1 mouse_genomes_project 19 3310523 3310612 + Mir192 miRNA miRNA MGP_129S1SvImJ_T0051364.1 MGP_129S1SvImJ_G0024984.1 mouse_genomes_project 19 21340610 21415450 - MGP_129S1SvImJ_P0051364 Smc5 protein_coding protein_coding MGP_129S1SvImJ_T0051365.1 MGP_129S1SvImJ_G0024984.1 mouse_genomes_project 19 21340620 21349250 - MGP_129S1SvImJ_P0051365 Smc5 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0050894.1 MGP_129S1SvImJ_G0024786.1 mouse_genomes_project 19 4335200 4337658 - MGP_129S1SvImJ_P0050894 Cox8a protein_coding protein_coding MGP_129S1SvImJ_T0052062.1 MGP_129S1SvImJ_G0025230.1 mouse_genomes_project 19 47321192 47357237 - MGP_129S1SvImJ_P0052062 Obfc1 protein_coding protein_coding MGP_129S1SvImJ_T0052063.1 MGP_129S1SvImJ_G0025230.1 mouse_genomes_project 19 47321197 47328925 - Obfc1 protein_coding processed_transcript MGP_129S1SvImJ_T0052064.1 MGP_129S1SvImJ_G0025230.1 mouse_genomes_project 19 47327356 47357154 - MGP_129S1SvImJ_P0052064 Obfc1 protein_coding protein_coding MGP_129S1SvImJ_T0052065.1 MGP_129S1SvImJ_G0025230.1 mouse_genomes_project 19 47342284 47357082 - Obfc1 protein_coding processed_transcript MGP_129S1SvImJ_T0052066.1 MGP_129S1SvImJ_G0025230.1 mouse_genomes_project 19 47344221 47357014 - Obfc1 protein_coding processed_transcript MGP_129S1SvImJ_T0052067.1 MGP_129S1SvImJ_G0025230.1 mouse_genomes_project 19 47344350 47357212 - Obfc1 protein_coding retained_intron MGP_129S1SvImJ_T0052068.1 MGP_129S1SvImJ_G0025230.1 mouse_genomes_project 19 47344855 47357785 - MGP_129S1SvImJ_P0052068 Obfc1 protein_coding protein_coding MGP_129S1SvImJ_T0052069.1 MGP_129S1SvImJ_G0025230.1 mouse_genomes_project 19 47352469 47356380 - Obfc1 protein_coding processed_transcript MGP_129S1SvImJ_T0052070.1 MGP_129S1SvImJ_G0025230.1 mouse_genomes_project 19 47356032 47357164 - Obfc1 protein_coding retained_intron MGP_129S1SvImJ_T0052071.1 MGP_129S1SvImJ_G0025230.1 mouse_genomes_project 19 47356407 47357142 - Obfc1 protein_coding processed_transcript MGP_129S1SvImJ_T0051592.1 MGP_129S1SvImJ_G0025069.1 mouse_genomes_project 19 34929897 34951861 + MGP_129S1SvImJ_P0051592 Rpp30 protein_coding protein_coding MGP_129S1SvImJ_T0051111.1 MGP_129S1SvImJ_G0024855.1 mouse_genomes_project 19 8061188 8072531 + MGP_129S1SvImJ_P0051111 Vps37c protein_coding unknown_likely_coding MGP_129S1SvImJ_T0051457.1 MGP_129S1SvImJ_G0025015.1 mouse_genomes_project 19 27420738 27448921 + MGP_129S1SvImJ_P0051457 Cdc37l1 protein_coding protein_coding MGP_129S1SvImJ_T0051458.1 MGP_129S1SvImJ_G0025015.1 mouse_genomes_project 19 27420782 27444155 + MGP_129S1SvImJ_P0051458 Cdc37l1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0007075.1 MGP_129S1SvImJ_G0005814.1 mouse_genomes_project 19 8428357 8432637 - AW112010 lincRNA lincRNA MGP_129S1SvImJ_T0052303.1 MGP_129S1SvImJ_G0025301.1 mouse_genomes_project 19 61894066 61897501 - MGP_129S1SvImJ_P0052303 Csf2ra protein_coding protein_coding MGP_129S1SvImJ_T0051885.1 MGP_129S1SvImJ_G0025164.1 mouse_genomes_project 19 43560897 43589350 - MGP_129S1SvImJ_P0051885 Cwf19l1 protein_coding protein_coding MGP_129S1SvImJ_T0050944.1 MGP_129S1SvImJ_G0024798.1 mouse_genomes_project 19 4923514 4957149 - MGP_129S1SvImJ_P0050944 Slc22a26 protein_coding protein_coding MGP_129S1SvImJ_T0050945.1 MGP_129S1SvImJ_G0024798.1 mouse_genomes_project 19 4924453 4957238 - MGP_129S1SvImJ_P0050945 Slc22a26 protein_coding protein_coding MGP_129S1SvImJ_T0051692.1 MGP_129S1SvImJ_G0025103.1 mouse_genomes_project 19 38717076 38762619 - MGP_129S1SvImJ_P0051692 protein_coding protein_coding MGP_129S1SvImJ_T0051366.1 MGP_129S1SvImJ_G0024985.1 mouse_genomes_project 19 21447585 21607687 - MGP_129S1SvImJ_P0051366 Mamdc2 protein_coding protein_coding MGP_129S1SvImJ_T0051643.1 MGP_129S1SvImJ_G0025085.1 mouse_genomes_project 19 36903235 37056691 - MGP_129S1SvImJ_P0051643 Myof protein_coding protein_coding MGP_129S1SvImJ_T0051644.1 MGP_129S1SvImJ_G0025085.1 mouse_genomes_project 19 36903235 37056691 - MGP_129S1SvImJ_P0051644 Myof protein_coding protein_coding MGP_129S1SvImJ_T0051645.1 MGP_129S1SvImJ_G0025085.1 mouse_genomes_project 19 36903928 37056435 - MGP_129S1SvImJ_P0051645 Myof protein_coding unknown_likely_coding MGP_129S1SvImJ_T0013406.1 MGP_129S1SvImJ_G0011495.1 mouse_genomes_project 19 42646857 42648254 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0010332.1 MGP_129S1SvImJ_G0008448.1 mouse_genomes_project 19 43762966 43763027 + Mir5114 miRNA miRNA MGP_129S1SvImJ_T0052116.1 MGP_129S1SvImJ_G0025243.1 mouse_genomes_project 19 53264473 53382592 + MGP_129S1SvImJ_P0052116 Add3 protein_coding protein_coding MGP_129S1SvImJ_T0052117.1 MGP_129S1SvImJ_G0025243.1 mouse_genomes_project 19 53266784 53382592 + MGP_129S1SvImJ_P0052117 Add3 protein_coding protein_coding MGP_129S1SvImJ_T0052118.1 MGP_129S1SvImJ_G0025243.1 mouse_genomes_project 19 53268017 53382592 + MGP_129S1SvImJ_P0052118 Add3 protein_coding protein_coding MGP_129S1SvImJ_T0100899.1 MGP_129S1SvImJ_G0038966.1 mouse_genomes_project 19 23203488 23203620 - Gm23658 snoRNA snoRNA MGP_129S1SvImJ_T0013411.1 MGP_129S1SvImJ_G0011500.1 mouse_genomes_project 19 57133165 57133513 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0050375.1 MGP_129S1SvImJ_G0024643.1 mouse_genomes_project 19 887206 889176 - MGP_129S1SvImJ_P0050375 BC021614 protein_coding protein_coding MGP_129S1SvImJ_T0050376.1 MGP_129S1SvImJ_G0024643.1 mouse_genomes_project 19 887207 889025 - MGP_129S1SvImJ_P0050376 BC021614 protein_coding protein_coding MGP_129S1SvImJ_T0051934.1 MGP_129S1SvImJ_G0025188.1 mouse_genomes_project 19 45158509 45166703 - MGP_129S1SvImJ_P0051934 Poll protein_coding protein_coding MGP_129S1SvImJ_T0051161.1 MGP_129S1SvImJ_G0024871.1 mouse_genomes_project 19 8563857 8590346 - MGP_129S1SvImJ_P0051161 Ms4a13 protein_coding protein_coding MGP_129S1SvImJ_T0051162.1 MGP_129S1SvImJ_G0024871.1 mouse_genomes_project 19 8563858 8590360 - MGP_129S1SvImJ_P0051162 Ms4a13 protein_coding protein_coding MGP_129S1SvImJ_T0013413.1 MGP_129S1SvImJ_G0011502.1 mouse_genomes_project 19 61421704 61422071 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0100883.1 MGP_129S1SvImJ_G0038950.1 mouse_genomes_project 19 5992425 5992497 + Gm25855 snoRNA snoRNA MGP_129S1SvImJ_T0050428.1 MGP_129S1SvImJ_G0024657.1 mouse_genomes_project 19 1058548 1067800 + MGP_129S1SvImJ_P0050428 Clcf1 protein_coding protein_coding MGP_129S1SvImJ_T0050429.1 MGP_129S1SvImJ_G0024657.1 mouse_genomes_project 19 1058574 1067800 + Clcf1 protein_coding retained_intron MGP_129S1SvImJ_T0050430.1 MGP_129S1SvImJ_G0024657.1 mouse_genomes_project 19 1058615 1067800 + MGP_129S1SvImJ_P0050430 Clcf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050431.1 MGP_129S1SvImJ_G0024657.1 mouse_genomes_project 19 1058904 1066823 + Clcf1 protein_coding processed_transcript MGP_129S1SvImJ_T0017711.1 MGP_129S1SvImJ_G0015377.1 mouse_genomes_project 19 3314474 3323118 - Gm14963 processed_transcript processed_transcript MGP_129S1SvImJ_T0051917.1 MGP_129S1SvImJ_G0025179.1 mouse_genomes_project 19 44543040 44544469 - MGP_129S1SvImJ_P0051917 Mrpl43 protein_coding protein_coding MGP_129S1SvImJ_T0011498.1 MGP_129S1SvImJ_G0009614.1 mouse_genomes_project 19 16672309 16672525 - Gm24190 misc_RNA misc_RNA MGP_129S1SvImJ_T0050888.1 MGP_129S1SvImJ_G0024784.1 mouse_genomes_project 19 4207873 4222211 - MGP_129S1SvImJ_P0050888 Flrt1 protein_coding protein_coding MGP_129S1SvImJ_T0051357.1 MGP_129S1SvImJ_G0024982.1 mouse_genomes_project 19 20209494 21090647 + MGP_129S1SvImJ_P0051357 Trpm3 protein_coding protein_coding MGP_129S1SvImJ_T0051358.1 MGP_129S1SvImJ_G0024982.1 mouse_genomes_project 19 20209494 21090647 + MGP_129S1SvImJ_P0051358 Trpm3 protein_coding protein_coding MGP_129S1SvImJ_T0051359.1 MGP_129S1SvImJ_G0024982.1 mouse_genomes_project 19 20209494 21090647 + MGP_129S1SvImJ_P0051359 Trpm3 protein_coding protein_coding MGP_129S1SvImJ_T0051360.1 MGP_129S1SvImJ_G0024982.1 mouse_genomes_project 19 20537017 21090649 + MGP_129S1SvImJ_P0051360 Trpm3 protein_coding protein_coding MGP_129S1SvImJ_T0051361.1 MGP_129S1SvImJ_G0024982.1 mouse_genomes_project 19 20788073 20862785 + MGP_129S1SvImJ_P0051361 Trpm3 protein_coding protein_coding MGP_129S1SvImJ_T0051362.1 MGP_129S1SvImJ_G0024982.1 mouse_genomes_project 19 20788073 21025801 + MGP_129S1SvImJ_P0051362 Trpm3 protein_coding protein_coding MGP_129S1SvImJ_T0050663.1 MGP_129S1SvImJ_G0024737.1 mouse_genomes_project 19 3074161 3081298 + MGP_129S1SvImJ_P0050663 Syvn1 protein_coding protein_coding MGP_129S1SvImJ_T0050664.1 MGP_129S1SvImJ_G0024737.1 mouse_genomes_project 19 3074223 3076789 + MGP_129S1SvImJ_P0050664 Syvn1 protein_coding protein_coding MGP_129S1SvImJ_T0050665.1 MGP_129S1SvImJ_G0024737.1 mouse_genomes_project 19 3074247 3081295 + MGP_129S1SvImJ_P0050665 Syvn1 protein_coding protein_coding MGP_129S1SvImJ_T0050666.1 MGP_129S1SvImJ_G0024737.1 mouse_genomes_project 19 3074650 3081297 + Syvn1 protein_coding retained_intron MGP_129S1SvImJ_T0050667.1 MGP_129S1SvImJ_G0024737.1 mouse_genomes_project 19 3074665 3081295 + MGP_129S1SvImJ_P0050667 Syvn1 protein_coding protein_coding MGP_129S1SvImJ_T0050668.1 MGP_129S1SvImJ_G0024737.1 mouse_genomes_project 19 3074670 3077237 + Syvn1 protein_coding retained_intron MGP_129S1SvImJ_T0050669.1 MGP_129S1SvImJ_G0024737.1 mouse_genomes_project 19 3074689 3081295 + MGP_129S1SvImJ_P0050669 Syvn1 protein_coding protein_coding MGP_129S1SvImJ_T0050302.1 MGP_129S1SvImJ_G0024629.1 mouse_genomes_project 19 552197 608454 + MGP_129S1SvImJ_P0050302 Suv420h1 protein_coding protein_coding MGP_129S1SvImJ_T0050303.1 MGP_129S1SvImJ_G0024629.1 mouse_genomes_project 19 552197 606543 + MGP_129S1SvImJ_P0050303 Suv420h1 protein_coding protein_coding MGP_129S1SvImJ_T0050304.1 MGP_129S1SvImJ_G0024629.1 mouse_genomes_project 19 552197 608455 + MGP_129S1SvImJ_P0050304 Suv420h1 protein_coding protein_coding MGP_129S1SvImJ_T0050305.1 MGP_129S1SvImJ_G0024629.1 mouse_genomes_project 19 552197 606543 + MGP_129S1SvImJ_P0050305 Suv420h1 protein_coding protein_coding MGP_129S1SvImJ_T0050306.1 MGP_129S1SvImJ_G0024629.1 mouse_genomes_project 19 552197 595747 + MGP_129S1SvImJ_P0050306 Suv420h1 protein_coding protein_coding MGP_129S1SvImJ_T0050307.1 MGP_129S1SvImJ_G0024629.1 mouse_genomes_project 19 552299 593242 + MGP_129S1SvImJ_P0050307 Suv420h1 protein_coding protein_coding MGP_129S1SvImJ_T0050308.1 MGP_129S1SvImJ_G0024629.1 mouse_genomes_project 19 552809 595753 + MGP_129S1SvImJ_P0050308 Suv420h1 protein_coding protein_coding MGP_129S1SvImJ_T0050309.1 MGP_129S1SvImJ_G0024629.1 mouse_genomes_project 19 552894 591975 + MGP_129S1SvImJ_P0050309 Suv420h1 protein_coding protein_coding MGP_129S1SvImJ_T0050310.1 MGP_129S1SvImJ_G0024629.1 mouse_genomes_project 19 552910 568497 + Suv420h1 protein_coding retained_intron MGP_129S1SvImJ_T0050311.1 MGP_129S1SvImJ_G0024629.1 mouse_genomes_project 19 552925 591420 + MGP_129S1SvImJ_P0050311 Suv420h1 protein_coding protein_coding MGP_129S1SvImJ_T0050312.1 MGP_129S1SvImJ_G0024629.1 mouse_genomes_project 19 552942 606840 + MGP_129S1SvImJ_P0050312 Suv420h1 protein_coding protein_coding MGP_129S1SvImJ_T0050313.1 MGP_129S1SvImJ_G0024629.1 mouse_genomes_project 19 552945 580129 + MGP_129S1SvImJ_P0050313 Suv420h1 protein_coding protein_coding MGP_129S1SvImJ_T0050314.1 MGP_129S1SvImJ_G0024629.1 mouse_genomes_project 19 552994 595725 + MGP_129S1SvImJ_P0050314 Suv420h1 protein_coding protein_coding MGP_129S1SvImJ_T0050315.1 MGP_129S1SvImJ_G0024629.1 mouse_genomes_project 19 553009 580147 + MGP_129S1SvImJ_P0050315 Suv420h1 protein_coding protein_coding MGP_129S1SvImJ_T0050316.1 MGP_129S1SvImJ_G0024629.1 mouse_genomes_project 19 553323 583622 + MGP_129S1SvImJ_P0050316 Suv420h1 protein_coding protein_coding MGP_129S1SvImJ_T0050317.1 MGP_129S1SvImJ_G0024629.1 mouse_genomes_project 19 578681 586511 + Suv420h1 protein_coding retained_intron MGP_129S1SvImJ_T0050318.1 MGP_129S1SvImJ_G0024629.1 mouse_genomes_project 19 591311 594320 + Suv420h1 protein_coding retained_intron MGP_129S1SvImJ_T0052216.1 MGP_129S1SvImJ_G0025272.1 mouse_genomes_project 19 57421603 57620959 - MGP_129S1SvImJ_P0052216 Ablim1 protein_coding protein_coding MGP_129S1SvImJ_T0052217.1 MGP_129S1SvImJ_G0025272.1 mouse_genomes_project 19 57421760 57514191 - MGP_129S1SvImJ_P0052217 Ablim1 protein_coding protein_coding MGP_129S1SvImJ_T0052218.1 MGP_129S1SvImJ_G0025272.1 mouse_genomes_project 19 57422136 57514191 - MGP_129S1SvImJ_P0052218 Ablim1 protein_coding protein_coding MGP_129S1SvImJ_T0052219.1 MGP_129S1SvImJ_G0025272.1 mouse_genomes_project 19 57422143 57602797 - MGP_129S1SvImJ_P0052219 Ablim1 protein_coding protein_coding MGP_129S1SvImJ_T0052220.1 MGP_129S1SvImJ_G0025272.1 mouse_genomes_project 19 57425148 57646651 - MGP_129S1SvImJ_P0052220 Ablim1 protein_coding protein_coding MGP_129S1SvImJ_T0052221.1 MGP_129S1SvImJ_G0025272.1 mouse_genomes_project 19 57425291 57514189 - MGP_129S1SvImJ_P0052221 Ablim1 protein_coding protein_coding MGP_129S1SvImJ_T0052222.1 MGP_129S1SvImJ_G0025272.1 mouse_genomes_project 19 57425352 57514095 - MGP_129S1SvImJ_P0052222 Ablim1 protein_coding protein_coding MGP_129S1SvImJ_T0052223.1 MGP_129S1SvImJ_G0025272.1 mouse_genomes_project 19 57425569 57602622 - MGP_129S1SvImJ_P0052223 Ablim1 protein_coding protein_coding MGP_129S1SvImJ_T0052224.1 MGP_129S1SvImJ_G0025272.1 mouse_genomes_project 19 57425851 57647183 - MGP_129S1SvImJ_P0052224 Ablim1 protein_coding protein_coding MGP_129S1SvImJ_T0052225.1 MGP_129S1SvImJ_G0025272.1 mouse_genomes_project 19 57425889 57620892 - MGP_129S1SvImJ_P0052225 Ablim1 protein_coding protein_coding MGP_129S1SvImJ_T0052226.1 MGP_129S1SvImJ_G0025272.1 mouse_genomes_project 19 57426025 57602557 - MGP_129S1SvImJ_P0052226 Ablim1 protein_coding protein_coding MGP_129S1SvImJ_T0052227.1 MGP_129S1SvImJ_G0025272.1 mouse_genomes_project 19 57426067 57602662 - MGP_129S1SvImJ_P0052227 Ablim1 protein_coding protein_coding MGP_129S1SvImJ_T0052228.1 MGP_129S1SvImJ_G0025272.1 mouse_genomes_project 19 57426136 57725955 - Ablim1 protein_coding retained_intron MGP_129S1SvImJ_T0052229.1 MGP_129S1SvImJ_G0025272.1 mouse_genomes_project 19 57428326 57436133 - Ablim1 protein_coding processed_transcript MGP_129S1SvImJ_T0052230.1 MGP_129S1SvImJ_G0025272.1 mouse_genomes_project 19 57429948 57433836 - Ablim1 protein_coding retained_intron MGP_129S1SvImJ_T0052231.1 MGP_129S1SvImJ_G0025272.1 mouse_genomes_project 19 57451064 57531177 - Ablim1 protein_coding retained_intron MGP_129S1SvImJ_T0052232.1 MGP_129S1SvImJ_G0025272.1 mouse_genomes_project 19 57466925 57531146 - Ablim1 protein_coding processed_transcript MGP_129S1SvImJ_T0052233.1 MGP_129S1SvImJ_G0025272.1 mouse_genomes_project 19 57511231 57514206 - Ablim1 protein_coding processed_transcript MGP_129S1SvImJ_T0052234.1 MGP_129S1SvImJ_G0025272.1 mouse_genomes_project 19 57526732 57534924 - Ablim1 protein_coding processed_transcript MGP_129S1SvImJ_T0052235.1 MGP_129S1SvImJ_G0025272.1 mouse_genomes_project 19 57527074 57725947 - MGP_129S1SvImJ_P0052235 Ablim1 protein_coding protein_coding MGP_129S1SvImJ_T0052236.1 MGP_129S1SvImJ_G0025272.1 mouse_genomes_project 19 57527314 57587482 - MGP_129S1SvImJ_P0052236 Ablim1 protein_coding protein_coding MGP_129S1SvImJ_T0017754.1 MGP_129S1SvImJ_G0015388.1 mouse_genomes_project 19 42134766 42138420 + Gm16244 processed_transcript processed_transcript MGP_129S1SvImJ_T0017755.1 MGP_129S1SvImJ_G0015388.1 mouse_genomes_project 19 42134844 42135998 + Gm16244 processed_transcript processed_transcript MGP_129S1SvImJ_T0051369.1 MGP_129S1SvImJ_G0024988.1 mouse_genomes_project 19 21860115 21895063 + MGP_129S1SvImJ_P0051369 Ptar1 protein_coding protein_coding MGP_129S1SvImJ_T0052056.1 MGP_129S1SvImJ_G0025226.1 mouse_genomes_project 19 46930137 46937177 - MGP_129S1SvImJ_P0052056 Calhm3 protein_coding protein_coding MGP_129S1SvImJ_T0050464.1 MGP_129S1SvImJ_G0024663.1 mouse_genomes_project 19 1293402 1311439 - MGP_129S1SvImJ_P0050464 Rhod protein_coding protein_coding MGP_129S1SvImJ_T0050465.1 MGP_129S1SvImJ_G0024663.1 mouse_genomes_project 19 1293610 1311428 - MGP_129S1SvImJ_P0050465 Rhod protein_coding protein_coding MGP_129S1SvImJ_T0050466.1 MGP_129S1SvImJ_G0024663.1 mouse_genomes_project 19 1294170 1294499 - Rhod protein_coding processed_transcript MGP_129S1SvImJ_T0098343.1 MGP_129S1SvImJ_G0036428.1 mouse_genomes_project 19 10520911 10521836 + pseudogene pseudogene MGP_129S1SvImJ_T0050786.1 MGP_129S1SvImJ_G0024761.1 mouse_genomes_project 19 3414505 3430211 + MGP_129S1SvImJ_P0050786 Sf1 protein_coding protein_coding MGP_129S1SvImJ_T0050787.1 MGP_129S1SvImJ_G0024761.1 mouse_genomes_project 19 3414534 3429384 + MGP_129S1SvImJ_P0050787 Sf1 protein_coding protein_coding MGP_129S1SvImJ_T0050788.1 MGP_129S1SvImJ_G0024761.1 mouse_genomes_project 19 3414625 3428693 + MGP_129S1SvImJ_P0050788 Sf1 protein_coding protein_coding MGP_129S1SvImJ_T0050789.1 MGP_129S1SvImJ_G0024761.1 mouse_genomes_project 19 3414737 3416771 + Sf1 protein_coding retained_intron MGP_129S1SvImJ_T0050790.1 MGP_129S1SvImJ_G0024761.1 mouse_genomes_project 19 3414737 3429377 + MGP_129S1SvImJ_P0050790 Sf1 protein_coding protein_coding MGP_129S1SvImJ_T0050791.1 MGP_129S1SvImJ_G0024761.1 mouse_genomes_project 19 3414737 3429383 + MGP_129S1SvImJ_P0050791 Sf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050792.1 MGP_129S1SvImJ_G0024761.1 mouse_genomes_project 19 3414778 3419600 + Sf1 protein_coding retained_intron MGP_129S1SvImJ_T0050793.1 MGP_129S1SvImJ_G0024761.1 mouse_genomes_project 19 3415009 3423009 + MGP_129S1SvImJ_P0050793 Sf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050794.1 MGP_129S1SvImJ_G0024761.1 mouse_genomes_project 19 3415372 3423435 + MGP_129S1SvImJ_P0050794 Sf1 protein_coding protein_coding MGP_129S1SvImJ_T0050795.1 MGP_129S1SvImJ_G0024761.1 mouse_genomes_project 19 3420934 3422908 + Sf1 protein_coding processed_transcript MGP_129S1SvImJ_T0050796.1 MGP_129S1SvImJ_G0024761.1 mouse_genomes_project 19 3421527 3422510 + Sf1 protein_coding retained_intron MGP_129S1SvImJ_T0050797.1 MGP_129S1SvImJ_G0024761.1 mouse_genomes_project 19 3423228 3423737 + Sf1 protein_coding retained_intron MGP_129S1SvImJ_T0050798.1 MGP_129S1SvImJ_G0024761.1 mouse_genomes_project 19 3424436 3428835 + MGP_129S1SvImJ_P0050798 Sf1 protein_coding protein_coding MGP_129S1SvImJ_T0050799.1 MGP_129S1SvImJ_G0024761.1 mouse_genomes_project 19 3424825 3428693 + MGP_129S1SvImJ_P0050799 Sf1 protein_coding protein_coding MGP_129S1SvImJ_T0050800.1 MGP_129S1SvImJ_G0024761.1 mouse_genomes_project 19 3424944 3427961 + MGP_129S1SvImJ_P0050800 Sf1 protein_coding protein_coding MGP_129S1SvImJ_T0052261.1 MGP_129S1SvImJ_G0025284.1 mouse_genomes_project 19 59471623 59579615 - MGP_129S1SvImJ_P0052261 Shtn1 protein_coding protein_coding MGP_129S1SvImJ_T0003892.1 MGP_129S1SvImJ_G0003482.1 mouse_genomes_project 19 44351471 44358886 - 1700039E22Rik antisense antisense MGP_129S1SvImJ_T0052254.1 MGP_129S1SvImJ_G0025281.1 mouse_genomes_project 19 59274277 59282863 - MGP_129S1SvImJ_P0052254 1700019N19Rik protein_coding protein_coding MGP_129S1SvImJ_T0052255.1 MGP_129S1SvImJ_G0025281.1 mouse_genomes_project 19 59274470 59281669 - MGP_129S1SvImJ_P0052255 1700019N19Rik protein_coding protein_coding MGP_129S1SvImJ_T0051748.1 MGP_129S1SvImJ_G0025120.1 mouse_genomes_project 19 40344663 40466227 - MGP_129S1SvImJ_P0051748 Tll2 protein_coding protein_coding MGP_129S1SvImJ_T0051749.1 MGP_129S1SvImJ_G0025120.1 mouse_genomes_project 19 40344663 40466227 - MGP_129S1SvImJ_P0051749 Tll2 protein_coding protein_coding MGP_129S1SvImJ_T0051370.1 MGP_129S1SvImJ_G0024989.1 mouse_genomes_project 19 21897218 21898974 + MGP_129S1SvImJ_P0051370 Gm9938 protein_coding protein_coding MGP_129S1SvImJ_T0051299.1 MGP_129S1SvImJ_G0024960.1 mouse_genomes_project 19 14373914 14563663 - MGP_129S1SvImJ_P0051299 Vps13a protein_coding protein_coding MGP_129S1SvImJ_T0051300.1 MGP_129S1SvImJ_G0024960.1 mouse_genomes_project 19 14392269 14563610 - MGP_129S1SvImJ_P0051300 Vps13a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0052123.1 MGP_129S1SvImJ_G0025247.1 mouse_genomes_project 19 53681734 53694761 + MGP_129S1SvImJ_P0052123 Dusp5 protein_coding protein_coding MGP_129S1SvImJ_T0050347.1 MGP_129S1SvImJ_G0024633.1 mouse_genomes_project 19 721964 738233 - MGP_129S1SvImJ_P0050347 Aldh3b1 protein_coding protein_coding MGP_129S1SvImJ_T0051586.1 MGP_129S1SvImJ_G0025068.1 mouse_genomes_project 19 34802211 34903464 - MGP_129S1SvImJ_P0051586 Htr7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051587.1 MGP_129S1SvImJ_G0025068.1 mouse_genomes_project 19 34802211 34903464 - MGP_129S1SvImJ_P0051587 Htr7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051588.1 MGP_129S1SvImJ_G0025068.1 mouse_genomes_project 19 34802211 34903444 - MGP_129S1SvImJ_P0051588 Htr7 protein_coding protein_coding MGP_129S1SvImJ_T0051589.1 MGP_129S1SvImJ_G0025068.1 mouse_genomes_project 19 34802222 34903472 - MGP_129S1SvImJ_P0051589 Htr7 protein_coding protein_coding MGP_129S1SvImJ_T0051590.1 MGP_129S1SvImJ_G0025068.1 mouse_genomes_project 19 34803297 34903611 - MGP_129S1SvImJ_P0051590 Htr7 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051591.1 MGP_129S1SvImJ_G0025068.1 mouse_genomes_project 19 34803792 34903477 - MGP_129S1SvImJ_P0051591 Htr7 protein_coding protein_coding MGP_129S1SvImJ_T0050701.1 MGP_129S1SvImJ_G0024744.1 mouse_genomes_project 19 3106143 3111697 - MGP_129S1SvImJ_P0050701 Gm28374 protein_coding protein_coding MGP_129S1SvImJ_T0051276.1 MGP_129S1SvImJ_G0024946.1 mouse_genomes_project 19 11328634 11329723 + MGP_129S1SvImJ_P0051276 Olfr1495 protein_coding protein_coding MGP_129S1SvImJ_T0050374.1 MGP_129S1SvImJ_G0024642.1 mouse_genomes_project 19 869033 870628 - MGP_129S1SvImJ_P0050374 Gstp2 protein_coding protein_coding MGP_129S1SvImJ_T0007103.1 MGP_129S1SvImJ_G0005834.1 mouse_genomes_project 19 44204222 44207127 - Gm26644 lincRNA lincRNA MGP_129S1SvImJ_T0051630.1 MGP_129S1SvImJ_G0025078.1 mouse_genomes_project 19 36148594 36165533 + MGP_129S1SvImJ_P0051630 March5 protein_coding protein_coding MGP_129S1SvImJ_T0051631.1 MGP_129S1SvImJ_G0025078.1 mouse_genomes_project 19 36148631 36162140 + MGP_129S1SvImJ_P0051631 March5 protein_coding protein_coding MGP_129S1SvImJ_T0051632.1 MGP_129S1SvImJ_G0025078.1 mouse_genomes_project 19 36148639 36158705 + March5 protein_coding retained_intron MGP_129S1SvImJ_T0100912.1 MGP_129S1SvImJ_G0038979.1 mouse_genomes_project 19 61620270 61620399 - Gm22520 snoRNA snoRNA MGP_129S1SvImJ_T0051526.1 MGP_129S1SvImJ_G0025039.1 mouse_genomes_project 19 30749703 31023068 - MGP_129S1SvImJ_P0051526 Sgms1 protein_coding protein_coding MGP_129S1SvImJ_T0051527.1 MGP_129S1SvImJ_G0025039.1 mouse_genomes_project 19 30749706 30980518 - MGP_129S1SvImJ_P0051527 Sgms1 protein_coding protein_coding MGP_129S1SvImJ_T0051528.1 MGP_129S1SvImJ_G0025039.1 mouse_genomes_project 19 30750455 30834227 - MGP_129S1SvImJ_P0051528 Sgms1 protein_coding protein_coding MGP_129S1SvImJ_T0051529.1 MGP_129S1SvImJ_G0025039.1 mouse_genomes_project 19 30751121 30904120 - MGP_129S1SvImJ_P0051529 Sgms1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051530.1 MGP_129S1SvImJ_G0025039.1 mouse_genomes_project 19 30751123 30788141 - MGP_129S1SvImJ_P0051530 Sgms1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051531.1 MGP_129S1SvImJ_G0025039.1 mouse_genomes_project 19 30786173 31024265 - Sgms1 protein_coding retained_intron MGP_129S1SvImJ_T0051532.1 MGP_129S1SvImJ_G0025039.1 mouse_genomes_project 19 30787978 30826066 - MGP_129S1SvImJ_P0051532 Sgms1 protein_coding protein_coding MGP_129S1SvImJ_T0051533.1 MGP_129S1SvImJ_G0025039.1 mouse_genomes_project 19 30788075 30864147 - Sgms1 protein_coding processed_transcript MGP_129S1SvImJ_T0051534.1 MGP_129S1SvImJ_G0025039.1 mouse_genomes_project 19 30788087 30953596 - Sgms1 protein_coding processed_transcript MGP_129S1SvImJ_T0051535.1 MGP_129S1SvImJ_G0025039.1 mouse_genomes_project 19 30788216 30904094 - Sgms1 protein_coding processed_transcript MGP_129S1SvImJ_T0051536.1 MGP_129S1SvImJ_G0025039.1 mouse_genomes_project 19 30843582 30874279 - Sgms1 protein_coding processed_transcript MGP_129S1SvImJ_T0051537.1 MGP_129S1SvImJ_G0025039.1 mouse_genomes_project 19 30845414 30917838 - Sgms1 protein_coding retained_intron MGP_129S1SvImJ_T0051538.1 MGP_129S1SvImJ_G0025039.1 mouse_genomes_project 19 30848145 30864161 - Sgms1 protein_coding retained_intron MGP_129S1SvImJ_T0051539.1 MGP_129S1SvImJ_G0025039.1 mouse_genomes_project 19 30917537 31023019 - Sgms1 protein_coding retained_intron MGP_129S1SvImJ_T0050452.1 MGP_129S1SvImJ_G0024662.1 mouse_genomes_project 19 1176122 1263719 - MGP_129S1SvImJ_P0050452 Kdm2a protein_coding protein_coding MGP_129S1SvImJ_T0050453.1 MGP_129S1SvImJ_G0024662.1 mouse_genomes_project 19 1177873 1262550 - MGP_129S1SvImJ_P0050453 Kdm2a protein_coding protein_coding MGP_129S1SvImJ_T0050454.1 MGP_129S1SvImJ_G0024662.1 mouse_genomes_project 19 1182115 1185241 - MGP_129S1SvImJ_P0050454 Kdm2a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050455.1 MGP_129S1SvImJ_G0024662.1 mouse_genomes_project 19 1183039 1185496 - Kdm2a protein_coding retained_intron MGP_129S1SvImJ_T0050456.1 MGP_129S1SvImJ_G0024662.1 mouse_genomes_project 19 1187598 1196693 - MGP_129S1SvImJ_P0050456 Kdm2a protein_coding protein_coding MGP_129S1SvImJ_T0050457.1 MGP_129S1SvImJ_G0024662.1 mouse_genomes_project 19 1191882 1196611 - MGP_129S1SvImJ_P0050457 Kdm2a protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050458.1 MGP_129S1SvImJ_G0024662.1 mouse_genomes_project 19 1205194 1262553 - MGP_129S1SvImJ_P0050458 Kdm2a protein_coding protein_coding MGP_129S1SvImJ_T0050459.1 MGP_129S1SvImJ_G0024662.1 mouse_genomes_project 19 1213059 1262549 - Kdm2a protein_coding retained_intron MGP_129S1SvImJ_T0050460.1 MGP_129S1SvImJ_G0024662.1 mouse_genomes_project 19 1215049 1228618 - MGP_129S1SvImJ_P0050460 Kdm2a protein_coding protein_coding MGP_129S1SvImJ_T0050461.1 MGP_129S1SvImJ_G0024662.1 mouse_genomes_project 19 1215466 1262541 - Kdm2a protein_coding retained_intron MGP_129S1SvImJ_T0050462.1 MGP_129S1SvImJ_G0024662.1 mouse_genomes_project 19 1253983 1262550 - MGP_129S1SvImJ_P0050462 Kdm2a protein_coding protein_coding MGP_129S1SvImJ_T0050463.1 MGP_129S1SvImJ_G0024662.1 mouse_genomes_project 19 1257951 1262568 - Kdm2a protein_coding retained_intron MGP_129S1SvImJ_T0051035.1 MGP_129S1SvImJ_G0024820.1 mouse_genomes_project 19 6175697 6180394 + Ints5 protein_coding processed_transcript MGP_129S1SvImJ_T0051036.1 MGP_129S1SvImJ_G0024820.1 mouse_genomes_project 19 6178155 6183057 + MGP_129S1SvImJ_P0051036 Ints5 protein_coding protein_coding MGP_129S1SvImJ_T0050354.1 MGP_129S1SvImJ_G0024636.1 mouse_genomes_project 19 805256 808695 + MGP_129S1SvImJ_P0050354 Acy3 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0052099.1 MGP_129S1SvImJ_G0025239.1 mouse_genomes_project 19 50025428 50026040 - MGP_129S1SvImJ_P0052099 Rpl13a-ps1 protein_coding protein_coding MGP_129S1SvImJ_T0052029.1 MGP_129S1SvImJ_G0025211.1 mouse_genomes_project 19 46249552 46305737 - MGP_129S1SvImJ_P0052029 Arl3 protein_coding protein_coding MGP_129S1SvImJ_T0050979.1 MGP_129S1SvImJ_G0024807.1 mouse_genomes_project 19 6030818 6047479 + MGP_129S1SvImJ_P0050979 Nxf1 protein_coding protein_coding MGP_129S1SvImJ_T0050980.1 MGP_129S1SvImJ_G0024807.1 mouse_genomes_project 19 6030852 6048852 + MGP_129S1SvImJ_P0050980 Nxf1 protein_coding protein_coding MGP_129S1SvImJ_T0050981.1 MGP_129S1SvImJ_G0024807.1 mouse_genomes_project 19 6030864 6044170 + Nxf1 protein_coding processed_transcript MGP_129S1SvImJ_T0050982.1 MGP_129S1SvImJ_G0024807.1 mouse_genomes_project 19 6030895 6041848 + MGP_129S1SvImJ_P0050982 Nxf1 protein_coding protein_coding MGP_129S1SvImJ_T0050983.1 MGP_129S1SvImJ_G0024807.1 mouse_genomes_project 19 6030895 6040296 + MGP_129S1SvImJ_P0050983 Nxf1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050984.1 MGP_129S1SvImJ_G0024807.1 mouse_genomes_project 19 6041490 6043953 + MGP_129S1SvImJ_P0050984 Nxf1 protein_coding protein_coding MGP_129S1SvImJ_T0050985.1 MGP_129S1SvImJ_G0024807.1 mouse_genomes_project 19 6043233 6045724 + Nxf1 protein_coding retained_intron MGP_129S1SvImJ_T0050986.1 MGP_129S1SvImJ_G0024807.1 mouse_genomes_project 19 6043269 6048883 + MGP_129S1SvImJ_P0050986 Nxf1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0050987.1 MGP_129S1SvImJ_G0024807.1 mouse_genomes_project 19 6043567 6044444 + Nxf1 protein_coding retained_intron MGP_129S1SvImJ_T0050988.1 MGP_129S1SvImJ_G0024807.1 mouse_genomes_project 19 6045191 6047406 + MGP_129S1SvImJ_P0050988 Nxf1 protein_coding protein_coding MGP_129S1SvImJ_T0050989.1 MGP_129S1SvImJ_G0024807.1 mouse_genomes_project 19 6046648 6047478 + Nxf1 protein_coding processed_transcript MGP_129S1SvImJ_T0050990.1 MGP_129S1SvImJ_G0024807.1 mouse_genomes_project 19 6046692 6047419 + Nxf1 protein_coding retained_intron MGP_129S1SvImJ_T0051895.1 MGP_129S1SvImJ_G0025170.1 mouse_genomes_project 19 43875425 43890076 - MGP_129S1SvImJ_P0051895 Scd1 protein_coding protein_coding MGP_129S1SvImJ_T0051896.1 MGP_129S1SvImJ_G0025170.1 mouse_genomes_project 19 43875428 43889776 - MGP_129S1SvImJ_P0051896 Scd1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0051122.1 MGP_129S1SvImJ_G0024859.1 mouse_genomes_project 19 8232719 8244832 - MGP_129S1SvImJ_P0051122 Tmem132a protein_coding protein_coding MGP_129S1SvImJ_T0051123.1 MGP_129S1SvImJ_G0024859.1 mouse_genomes_project 19 8232731 8244670 - MGP_129S1SvImJ_P0051123 Tmem132a protein_coding protein_coding MGP_129S1SvImJ_T0050397.1 MGP_129S1SvImJ_G0024647.1 mouse_genomes_project 19 947341 961020 - MGP_129S1SvImJ_P0050397 Aip protein_coding protein_coding MGP_129S1SvImJ_T0050398.1 MGP_129S1SvImJ_G0024647.1 mouse_genomes_project 19 947359 956325 - MGP_129S1SvImJ_P0050398 Aip protein_coding protein_coding MGP_129S1SvImJ_T0050399.1 MGP_129S1SvImJ_G0024647.1 mouse_genomes_project 19 948342 961010 - MGP_129S1SvImJ_P0050399 Aip protein_coding protein_coding MGP_129S1SvImJ_T0050400.1 MGP_129S1SvImJ_G0024647.1 mouse_genomes_project 19 951151 959314 - Aip protein_coding processed_transcript MGP_129S1SvImJ_T0050401.1 MGP_129S1SvImJ_G0024647.1 mouse_genomes_project 19 955682 960952 - Aip protein_coding retained_intron MGP_129S1SvImJ_T0051040.1 MGP_129S1SvImJ_G0024823.1 mouse_genomes_project 19 6215103 6217078 - MGP_129S1SvImJ_P0051040 Rom1 protein_coding protein_coding MGP_129S1SvImJ_T0001042.1 MGP_129S1SvImJ_G0000971.1 mouse_genomes_project 19 36407003 36408751 - TEC TEC MGP_129S1SvImJ_T0051163.1 MGP_129S1SvImJ_G0024872.1 mouse_genomes_project 19 8604096 8612927 - MGP_129S1SvImJ_P0051163 Ms4a12 protein_coding protein_coding MGP_129S1SvImJ_T0010296.1 MGP_129S1SvImJ_G0008412.1 mouse_genomes_project 19 1112683 1112744 - Mir6985 miRNA miRNA MGP_129S1SvImJ_T0100911.1 MGP_129S1SvImJ_G0038978.1 mouse_genomes_project 19 61376558 61376677 - Gm26158 snoRNA snoRNA MGP_129S1SvImJ_T0003877.1 MGP_129S1SvImJ_G0003472.1 mouse_genomes_project 19 4514196 4515851 + 1700105P06Rik antisense antisense MGP_129S1SvImJ_T0007112.1 MGP_129S1SvImJ_G0005840.1 mouse_genomes_project 19 46016273 46019528 + Gm26792 lincRNA lincRNA MGP_129S1SvImJ_T0098345.1 MGP_129S1SvImJ_G0036430.1 mouse_genomes_project 19 11477190 11477987 + pseudogene pseudogene MGP_129S1SvImJ_T0052149.1 MGP_129S1SvImJ_G0025259.1 mouse_genomes_project 19 55584334 55913194 + MGP_129S1SvImJ_P0052149 Vti1a protein_coding protein_coding MGP_129S1SvImJ_T0052150.1 MGP_129S1SvImJ_G0025259.1 mouse_genomes_project 19 55584434 55913949 + MGP_129S1SvImJ_P0052150 Vti1a protein_coding unknown_likely_coding MGP_129S1SvImJ_T0050442.1 MGP_129S1SvImJ_G0024661.1 mouse_genomes_project 19 1140947 1166444 - MGP_129S1SvImJ_P0050442 Adrbk1 protein_coding protein_coding MGP_129S1SvImJ_T0050443.1 MGP_129S1SvImJ_G0024661.1 mouse_genomes_project 19 1140947 1166519 - MGP_129S1SvImJ_P0050443 Adrbk1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050444.1 MGP_129S1SvImJ_G0024661.1 mouse_genomes_project 19 1140948 1166630 - MGP_129S1SvImJ_P0050444 Adrbk1 protein_coding protein_coding MGP_129S1SvImJ_T0050445.1 MGP_129S1SvImJ_G0024661.1 mouse_genomes_project 19 1140967 1166630 - MGP_129S1SvImJ_P0050445 Adrbk1 protein_coding protein_coding MGP_129S1SvImJ_T0050446.1 MGP_129S1SvImJ_G0024661.1 mouse_genomes_project 19 1143088 1146331 - Adrbk1 protein_coding retained_intron MGP_129S1SvImJ_T0050447.1 MGP_129S1SvImJ_G0024661.1 mouse_genomes_project 19 1145323 1146322 - MGP_129S1SvImJ_P0050447 Adrbk1 protein_coding protein_coding MGP_129S1SvImJ_T0050448.1 MGP_129S1SvImJ_G0024661.1 mouse_genomes_project 19 1145353 1147411 - MGP_129S1SvImJ_P0050448 Adrbk1 protein_coding protein_coding MGP_129S1SvImJ_T0050449.1 MGP_129S1SvImJ_G0024661.1 mouse_genomes_project 19 1147389 1148739 - Adrbk1 protein_coding retained_intron MGP_129S1SvImJ_T0050450.1 MGP_129S1SvImJ_G0024661.1 mouse_genomes_project 19 1148274 1166516 - Adrbk1 protein_coding retained_intron MGP_129S1SvImJ_T0050451.1 MGP_129S1SvImJ_G0024661.1 mouse_genomes_project 19 1149494 1165697 - MGP_129S1SvImJ_P0050451 Adrbk1 protein_coding protein_coding MGP_129S1SvImJ_T0051697.1 MGP_129S1SvImJ_G0025107.1 mouse_genomes_project 19 39218754 39262877 - MGP_129S1SvImJ_P0051697 Cyp2c54 protein_coding protein_coding MGP_129S1SvImJ_T0051987.1 MGP_129S1SvImJ_G0025199.1 mouse_genomes_project 19 45738086 45751348 + MGP_129S1SvImJ_P0051987 Nolc1 protein_coding protein_coding MGP_129S1SvImJ_T0051988.1 MGP_129S1SvImJ_G0025199.1 mouse_genomes_project 19 45738253 45751357 + MGP_129S1SvImJ_P0051988 Nolc1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0052041.1 MGP_129S1SvImJ_G0025216.1 mouse_genomes_project 19 46462919 46499173 + MGP_129S1SvImJ_P0052041 As3mt protein_coding protein_coding MGP_129S1SvImJ_T0051467.1 MGP_129S1SvImJ_G0025021.1 mouse_genomes_project 19 27801382 27812724 - MGP_129S1SvImJ_P0051467 Plgrkt protein_coding protein_coding MGP_129S1SvImJ_T0051468.1 MGP_129S1SvImJ_G0025021.1 mouse_genomes_project 19 27803181 27804649 - Plgrkt protein_coding retained_intron MGP_129S1SvImJ_T0051469.1 MGP_129S1SvImJ_G0025021.1 mouse_genomes_project 19 27803816 27815747 - MGP_129S1SvImJ_P0051469 Plgrkt protein_coding protein_coding MGP_129S1SvImJ_T0051470.1 MGP_129S1SvImJ_G0025021.1 mouse_genomes_project 19 27803910 27816164 - MGP_129S1SvImJ_P0051470 Plgrkt protein_coding protein_coding MGP_129S1SvImJ_T0051471.1 MGP_129S1SvImJ_G0025021.1 mouse_genomes_project 19 27812702 27821632 - MGP_129S1SvImJ_P0051471 Plgrkt protein_coding protein_coding MGP_129S1SvImJ_T0051472.1 MGP_129S1SvImJ_G0025021.1 mouse_genomes_project 19 27815193 27818233 - Plgrkt protein_coding processed_transcript MGP_129S1SvImJ_T0051473.1 MGP_129S1SvImJ_G0025021.1 mouse_genomes_project 19 27816428 27818796 - Plgrkt protein_coding processed_transcript MGP_129S1SvImJ_T0051474.1 MGP_129S1SvImJ_G0025021.1 mouse_genomes_project 19 27818408 27821714 - Plgrkt protein_coding processed_transcript MGP_129S1SvImJ_T0052208.1 MGP_129S1SvImJ_G0025271.1 mouse_genomes_project 19 57294253 57394860 - MGP_129S1SvImJ_P0052208 Afap1l2 protein_coding protein_coding MGP_129S1SvImJ_T0052209.1 MGP_129S1SvImJ_G0025271.1 mouse_genomes_project 19 57294253 57394842 - MGP_129S1SvImJ_P0052209 Afap1l2 protein_coding protein_coding MGP_129S1SvImJ_T0052210.1 MGP_129S1SvImJ_G0025271.1 mouse_genomes_project 19 57294253 57394830 - MGP_129S1SvImJ_P0052210 Afap1l2 protein_coding protein_coding MGP_129S1SvImJ_T0052211.1 MGP_129S1SvImJ_G0025271.1 mouse_genomes_project 19 57295274 57394798 - MGP_129S1SvImJ_P0052211 Afap1l2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0052212.1 MGP_129S1SvImJ_G0025271.1 mouse_genomes_project 19 57302290 57310454 - Afap1l2 protein_coding retained_intron MGP_129S1SvImJ_T0052213.1 MGP_129S1SvImJ_G0025271.1 mouse_genomes_project 19 57305440 57394860 - MGP_129S1SvImJ_P0052213 Afap1l2 protein_coding protein_coding MGP_129S1SvImJ_T0052214.1 MGP_129S1SvImJ_G0025271.1 mouse_genomes_project 19 57311956 57387639 - MGP_129S1SvImJ_P0052214 Afap1l2 protein_coding protein_coding MGP_129S1SvImJ_T0052215.1 MGP_129S1SvImJ_G0025271.1 mouse_genomes_project 19 57326615 57394840 - Afap1l2 protein_coding retained_intron MGP_129S1SvImJ_T0050639.1 MGP_129S1SvImJ_G0024729.1 mouse_genomes_project 19 2855154 2880128 - MGP_129S1SvImJ_P0050639 Frmd8 protein_coding protein_coding MGP_129S1SvImJ_T0050640.1 MGP_129S1SvImJ_G0024729.1 mouse_genomes_project 19 2866969 2868536 - Frmd8 protein_coding retained_intron MGP_129S1SvImJ_T0050641.1 MGP_129S1SvImJ_G0024729.1 mouse_genomes_project 19 2870037 2878284 - Frmd8 protein_coding retained_intron MGP_129S1SvImJ_T0050642.1 MGP_129S1SvImJ_G0024729.1 mouse_genomes_project 19 2870123 2880093 - MGP_129S1SvImJ_P0050642 Frmd8 protein_coding protein_coding MGP_129S1SvImJ_T0051915.1 MGP_129S1SvImJ_G0025177.1 mouse_genomes_project 19 44462474 44517863 + MGP_129S1SvImJ_P0051915 Fam178a protein_coding protein_coding MGP_129S1SvImJ_T0050918.1 MGP_129S1SvImJ_G0024790.1 mouse_genomes_project 19 4484723 4514579 - MGP_129S1SvImJ_P0050918 AI846148 protein_coding protein_coding MGP_129S1SvImJ_T0051989.1 MGP_129S1SvImJ_G0025200.1 mouse_genomes_project 19 45803121 45807424 + MGP_129S1SvImJ_P0051989 Elovl3 protein_coding protein_coding MGP_129S1SvImJ_T0010317.1 MGP_129S1SvImJ_G0008433.1 mouse_genomes_project 19 23203487 23203556 - Mir3084-1 miRNA miRNA MGP_129S1SvImJ_T0099640.1 MGP_129S1SvImJ_G0037707.1 mouse_genomes_project 19 35249297 35249403 - Gm23170 snRNA snRNA MGP_129S1SvImJ_T0050551.1 MGP_129S1SvImJ_G0024699.1 mouse_genomes_project 19 2300957 2305827 - MGP_129S1SvImJ_P0050551 Cst6 protein_coding protein_coding MGP_129S1SvImJ_T0050475.1 MGP_129S1SvImJ_G0024667.1 mouse_genomes_project 19 1498972 1502855 - MGP_129S1SvImJ_P0050475 Lrfn4 protein_coding protein_coding MGP_129S1SvImJ_T0050476.1 MGP_129S1SvImJ_G0024667.1 mouse_genomes_project 19 1498979 1502690 - MGP_129S1SvImJ_P0050476 Lrfn4 protein_coding protein_coding MGP_129S1SvImJ_T0017712.1 MGP_129S1SvImJ_G0015378.1 mouse_genomes_project 19 3464695 3475355 - Gm14965 processed_transcript antisense MGP_129S1SvImJ_T0017713.1 MGP_129S1SvImJ_G0015378.1 mouse_genomes_project 19 3473558 3475355 - Gm14965 processed_transcript retained_intron MGP_129S1SvImJ_T0013392.1 MGP_129S1SvImJ_G0011481.1 mouse_genomes_project 19 21835906 21836871 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0050887.1 MGP_129S1SvImJ_G0024783.1 mouse_genomes_project 19 4169413 4313947 + MGP_129S1SvImJ_P0050887 Macrod1 protein_coding protein_coding MGP_129S1SvImJ_T0051227.1 MGP_129S1SvImJ_G0024909.1 mouse_genomes_project 19 10114044 10133930 + MGP_129S1SvImJ_P0051227 Glyat protein_coding protein_coding MGP_129S1SvImJ_T0051228.1 MGP_129S1SvImJ_G0024909.1 mouse_genomes_project 19 10114251 10129191 + Glyat protein_coding retained_intron MGP_129S1SvImJ_T0051229.1 MGP_129S1SvImJ_G0024909.1 mouse_genomes_project 19 10114251 10115844 + Glyat protein_coding processed_transcript MGP_129S1SvImJ_T0051230.1 MGP_129S1SvImJ_G0024909.1 mouse_genomes_project 19 10114269 10134592 + MGP_129S1SvImJ_P0051230 Glyat protein_coding protein_coding MGP_129S1SvImJ_T0051231.1 MGP_129S1SvImJ_G0024909.1 mouse_genomes_project 19 10120180 10131105 + Glyat protein_coding processed_transcript MGP_129S1SvImJ_T0051124.1 MGP_129S1SvImJ_G0024860.1 mouse_genomes_project 19 8245551 8258073 - MGP_129S1SvImJ_P0051124 Tmem109 protein_coding protein_coding MGP_129S1SvImJ_T0051125.1 MGP_129S1SvImJ_G0024860.1 mouse_genomes_project 19 8246745 8255266 - MGP_129S1SvImJ_P0051125 Tmem109 protein_coding protein_coding MGP_129S1SvImJ_T0051126.1 MGP_129S1SvImJ_G0024860.1 mouse_genomes_project 19 8247029 8249633 - Tmem109 protein_coding retained_intron MGP_129S1SvImJ_T0051127.1 MGP_129S1SvImJ_G0024860.1 mouse_genomes_project 19 8247084 8258073 - MGP_129S1SvImJ_P0051127 Tmem109 protein_coding protein_coding MGP_129S1SvImJ_T0051128.1 MGP_129S1SvImJ_G0024860.1 mouse_genomes_project 19 8248823 8257783 - Tmem109 protein_coding retained_intron MGP_129S1SvImJ_T0051129.1 MGP_129S1SvImJ_G0024860.1 mouse_genomes_project 19 8249137 8257803 - MGP_129S1SvImJ_P0051129 Tmem109 protein_coding protein_coding MGP_129S1SvImJ_T0051130.1 MGP_129S1SvImJ_G0024860.1 mouse_genomes_project 19 8249155 8257770 - MGP_129S1SvImJ_P0051130 Tmem109 protein_coding protein_coding MGP_129S1SvImJ_T0051131.1 MGP_129S1SvImJ_G0024860.1 mouse_genomes_project 19 8255397 8257770 - Tmem109 protein_coding processed_transcript MGP_129S1SvImJ_T0013376.1 MGP_129S1SvImJ_G0011465.1 mouse_genomes_project 19 4820219 4820726 + processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0003900.1 MGP_129S1SvImJ_G0003490.1 mouse_genomes_project 19 59771241 59773149 - Gm29261 antisense antisense MGP_129S1SvImJ_T0050290.1 MGP_129S1SvImJ_G0024623.1 mouse_genomes_project 19 77636 143031 + MGP_129S1SvImJ_P0050290 Cpt1a protein_coding protein_coding MGP_129S1SvImJ_T0007063.1 MGP_129S1SvImJ_G0005808.1 mouse_genomes_project 19 2797304 2804287 - Malat1 lincRNA lincRNA MGP_129S1SvImJ_T0007064.1 MGP_129S1SvImJ_G0005808.1 mouse_genomes_project 19 2797305 2799079 - Malat1 lincRNA lincRNA MGP_129S1SvImJ_T0007065.1 MGP_129S1SvImJ_G0005808.1 mouse_genomes_project 19 2797308 2798567 - Malat1 lincRNA lincRNA MGP_129S1SvImJ_T0007066.1 MGP_129S1SvImJ_G0005808.1 mouse_genomes_project 19 2803530 2804286 - Malat1 lincRNA lincRNA MGP_129S1SvImJ_T0007067.1 MGP_129S1SvImJ_G0005808.1 mouse_genomes_project 19 2803557 2804255 - Malat1 lincRNA lincRNA MGP_129S1SvImJ_T0050736.1 MGP_129S1SvImJ_G0024754.1 mouse_genomes_project 19 3269926 3271315 + MGP_129S1SvImJ_P0050736 Gpha2 protein_coding protein_coding MGP_129S1SvImJ_T0050737.1 MGP_129S1SvImJ_G0024754.1 mouse_genomes_project 19 3269934 3271315 + MGP_129S1SvImJ_P0050737 Gpha2 protein_coding protein_coding MGP_129S1SvImJ_T0007119.1 MGP_129S1SvImJ_G0005844.1 mouse_genomes_project 19 53611480 53613570 + 4833407H14Rik lincRNA lincRNA MGP_129S1SvImJ_T0051282.1 MGP_129S1SvImJ_G0024952.1 mouse_genomes_project 19 11461099 11461836 + MGP_129S1SvImJ_P0051282 protein_coding protein_coding MGP_129S1SvImJ_T0050960.1 MGP_129S1SvImJ_G0024804.1 mouse_genomes_project 19 6007840 6012623 + MGP_129S1SvImJ_P0050960 Wdr74 protein_coding protein_coding MGP_129S1SvImJ_T0051975.1 MGP_129S1SvImJ_G0025198.1 mouse_genomes_project 19 45703556 45723357 + Pprc1 protein_coding processed_transcript MGP_129S1SvImJ_T0051976.1 MGP_129S1SvImJ_G0025198.1 mouse_genomes_project 19 45717695 45735133 + MGP_129S1SvImJ_P0051976 Pprc1 protein_coding protein_coding MGP_129S1SvImJ_T0051977.1 MGP_129S1SvImJ_G0025198.1 mouse_genomes_project 19 45717737 45735137 + MGP_129S1SvImJ_P0051977 Pprc1 protein_coding protein_coding MGP_129S1SvImJ_T0051978.1 MGP_129S1SvImJ_G0025198.1 mouse_genomes_project 19 45717740 45735131 + MGP_129S1SvImJ_P0051978 Pprc1 protein_coding protein_coding MGP_129S1SvImJ_T0051979.1 MGP_129S1SvImJ_G0025198.1 mouse_genomes_project 19 45717988 45722617 + Pprc1 protein_coding processed_transcript MGP_129S1SvImJ_T0051980.1 MGP_129S1SvImJ_G0025198.1 mouse_genomes_project 19 45717988 45723598 + MGP_129S1SvImJ_P0051980 Pprc1 protein_coding protein_coding MGP_129S1SvImJ_T0051981.1 MGP_129S1SvImJ_G0025198.1 mouse_genomes_project 19 45718020 45723963 + MGP_129S1SvImJ_P0051981 Pprc1 protein_coding protein_coding MGP_129S1SvImJ_T0051982.1 MGP_129S1SvImJ_G0025198.1 mouse_genomes_project 19 45718392 45723788 + MGP_129S1SvImJ_P0051982 Pprc1 protein_coding protein_coding MGP_129S1SvImJ_T0051983.1 MGP_129S1SvImJ_G0025198.1 mouse_genomes_project 19 45718415 45723804 + MGP_129S1SvImJ_P0051983 Pprc1 protein_coding protein_coding MGP_129S1SvImJ_T0051984.1 MGP_129S1SvImJ_G0025198.1 mouse_genomes_project 19 45725237 45735024 + Pprc1 protein_coding retained_intron MGP_129S1SvImJ_T0051985.1 MGP_129S1SvImJ_G0025198.1 mouse_genomes_project 19 45728993 45730251 + Pprc1 protein_coding processed_transcript MGP_129S1SvImJ_T0051986.1 MGP_129S1SvImJ_G0025198.1 mouse_genomes_project 19 45733976 45735024 + Pprc1 protein_coding retained_intron MGP_129S1SvImJ_T0051683.1 MGP_129S1SvImJ_G0025098.1 mouse_genomes_project 19 38188055 38218555 + MGP_129S1SvImJ_P0051683 Cyp2c65 protein_coding protein_coding MGP_129S1SvImJ_T0051301.1 MGP_129S1SvImJ_G0024961.1 mouse_genomes_project 19 14661996 14663511 - MGP_129S1SvImJ_P0051301 Foxb2 protein_coding protein_coding MGP_129S1SvImJ_T0051581.1 MGP_129S1SvImJ_G0025064.1 mouse_genomes_project 19 33400061 33409512 + MGP_129S1SvImJ_P0051581 Ifit1 protein_coding protein_coding MGP_129S1SvImJ_T0010339.1 MGP_129S1SvImJ_G0008455.1 mouse_genomes_project 19 50142672 50142797 + Gm27749 miRNA miRNA MGP_129S1SvImJ_T0050648.1 MGP_129S1SvImJ_G0024732.1 mouse_genomes_project 19 2902488 2923522 - MGP_129S1SvImJ_P0050648 Dpf2 protein_coding protein_coding MGP_129S1SvImJ_T0050649.1 MGP_129S1SvImJ_G0024732.1 mouse_genomes_project 19 2903359 2923443 - MGP_129S1SvImJ_P0050649 Dpf2 protein_coding protein_coding MGP_129S1SvImJ_T0050650.1 MGP_129S1SvImJ_G0024732.1 mouse_genomes_project 19 2903359 2916649 - MGP_129S1SvImJ_P0050650 Dpf2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050651.1 MGP_129S1SvImJ_G0024732.1 mouse_genomes_project 19 2905825 2912922 - Dpf2 protein_coding retained_intron MGP_129S1SvImJ_T0050652.1 MGP_129S1SvImJ_G0024732.1 mouse_genomes_project 19 2908715 2912031 - Dpf2 protein_coding retained_intron MGP_129S1SvImJ_T0050653.1 MGP_129S1SvImJ_G0024732.1 mouse_genomes_project 19 2913736 2923428 - Dpf2 protein_coding retained_intron MGP_129S1SvImJ_T0050654.1 MGP_129S1SvImJ_G0024732.1 mouse_genomes_project 19 2914715 2923420 - Dpf2 protein_coding retained_intron MGP_129S1SvImJ_T0050655.1 MGP_129S1SvImJ_G0024732.1 mouse_genomes_project 19 2915126 2923661 - Dpf2 protein_coding processed_transcript MGP_129S1SvImJ_T0050656.1 MGP_129S1SvImJ_G0024732.1 mouse_genomes_project 19 2922476 2923458 - Dpf2 protein_coding processed_transcript MGP_129S1SvImJ_T0051540.1 MGP_129S1SvImJ_G0025040.1 mouse_genomes_project 19 31119089 31149718 + MGP_129S1SvImJ_P0051540 Minpp1 protein_coding protein_coding MGP_129S1SvImJ_T0017715.1 MGP_129S1SvImJ_G0015380.1 mouse_genomes_project 19 5991901 5994876 + Snhg1 processed_transcript lincRNA MGP_129S1SvImJ_T0017716.1 MGP_129S1SvImJ_G0015380.1 mouse_genomes_project 19 5991913 5994874 + Snhg1 processed_transcript retained_intron MGP_129S1SvImJ_T0017717.1 MGP_129S1SvImJ_G0015380.1 mouse_genomes_project 19 5991913 5994875 + Snhg1 processed_transcript retained_intron MGP_129S1SvImJ_T0017718.1 MGP_129S1SvImJ_G0015380.1 mouse_genomes_project 19 5992437 5994876 + Snhg1 processed_transcript lincRNA MGP_129S1SvImJ_T0017719.1 MGP_129S1SvImJ_G0015380.1 mouse_genomes_project 19 5992563 5994325 + Snhg1 processed_transcript retained_intron MGP_129S1SvImJ_T0017720.1 MGP_129S1SvImJ_G0015380.1 mouse_genomes_project 19 5992572 5993285 + Snhg1 processed_transcript retained_intron MGP_129S1SvImJ_T0017721.1 MGP_129S1SvImJ_G0015380.1 mouse_genomes_project 19 5992579 5994778 + Snhg1 processed_transcript lincRNA MGP_129S1SvImJ_T0017722.1 MGP_129S1SvImJ_G0015380.1 mouse_genomes_project 19 5992590 5994876 + Snhg1 processed_transcript retained_intron MGP_129S1SvImJ_T0017723.1 MGP_129S1SvImJ_G0015380.1 mouse_genomes_project 19 5992594 5993774 + Snhg1 processed_transcript retained_intron MGP_129S1SvImJ_T0017724.1 MGP_129S1SvImJ_G0015380.1 mouse_genomes_project 19 5992788 5993736 + Snhg1 processed_transcript retained_intron MGP_129S1SvImJ_T0017725.1 MGP_129S1SvImJ_G0015380.1 mouse_genomes_project 19 5992825 5994268 + Snhg1 processed_transcript retained_intron MGP_129S1SvImJ_T0017726.1 MGP_129S1SvImJ_G0015380.1 mouse_genomes_project 19 5992835 5993955 + Snhg1 processed_transcript retained_intron MGP_129S1SvImJ_T0017727.1 MGP_129S1SvImJ_G0015380.1 mouse_genomes_project 19 5993095 5994876 + Snhg1 processed_transcript retained_intron MGP_129S1SvImJ_T0017728.1 MGP_129S1SvImJ_G0015380.1 mouse_genomes_project 19 5993329 5994876 + Snhg1 processed_transcript retained_intron MGP_129S1SvImJ_T0017729.1 MGP_129S1SvImJ_G0015380.1 mouse_genomes_project 19 5993454 5994435 + Snhg1 processed_transcript retained_intron MGP_129S1SvImJ_T0017730.1 MGP_129S1SvImJ_G0015380.1 mouse_genomes_project 19 5993536 5994876 + Snhg1 processed_transcript retained_intron MGP_129S1SvImJ_T0017731.1 MGP_129S1SvImJ_G0015380.1 mouse_genomes_project 19 5993907 5994876 + Snhg1 processed_transcript retained_intron MGP_129S1SvImJ_T0017732.1 MGP_129S1SvImJ_G0015380.1 mouse_genomes_project 19 5993932 5994876 + Snhg1 processed_transcript lincRNA MGP_129S1SvImJ_T0098740.1 MGP_129S1SvImJ_G0036825.1 mouse_genomes_project 19 9081313 9081452 + Gm26183 scaRNA scaRNA MGP_129S1SvImJ_T0052020.1 MGP_129S1SvImJ_G0025208.1 mouse_genomes_project 19 46063870 46084142 - MGP_129S1SvImJ_P0052020 Actr1a protein_coding protein_coding MGP_129S1SvImJ_T0007116.1 MGP_129S1SvImJ_G0005843.1 mouse_genomes_project 19 53592082 53615623 - Mirt1 lincRNA lincRNA MGP_129S1SvImJ_T0007117.1 MGP_129S1SvImJ_G0005843.1 mouse_genomes_project 19 53594827 53598128 - Mirt1 lincRNA lincRNA MGP_129S1SvImJ_T0007118.1 MGP_129S1SvImJ_G0005843.1 mouse_genomes_project 19 53602476 53604930 - Mirt1 lincRNA lincRNA MGP_129S1SvImJ_T0051029.1 MGP_129S1SvImJ_G0024819.1 mouse_genomes_project 19 6173125 6176050 + MGP_129S1SvImJ_P0051029 1810009A15Rik protein_coding protein_coding MGP_129S1SvImJ_T0051030.1 MGP_129S1SvImJ_G0024819.1 mouse_genomes_project 19 6173171 6175915 + 1810009A15Rik protein_coding retained_intron MGP_129S1SvImJ_T0051031.1 MGP_129S1SvImJ_G0024819.1 mouse_genomes_project 19 6173187 6175715 + MGP_129S1SvImJ_P0051031 1810009A15Rik protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051032.1 MGP_129S1SvImJ_G0024819.1 mouse_genomes_project 19 6173201 6175634 + 1810009A15Rik protein_coding retained_intron MGP_129S1SvImJ_T0051033.1 MGP_129S1SvImJ_G0024819.1 mouse_genomes_project 19 6173211 6175910 + 1810009A15Rik protein_coding retained_intron MGP_129S1SvImJ_T0052186.1 MGP_129S1SvImJ_G0025264.1 mouse_genomes_project 19 56812542 56837644 + MGP_129S1SvImJ_P0052186 Plekhs1 protein_coding protein_coding MGP_129S1SvImJ_T0052187.1 MGP_129S1SvImJ_G0025264.1 mouse_genomes_project 19 56812542 56837644 + MGP_129S1SvImJ_P0052187 Plekhs1 protein_coding protein_coding MGP_129S1SvImJ_T0052188.1 MGP_129S1SvImJ_G0025264.1 mouse_genomes_project 19 56815475 56836763 + MGP_129S1SvImJ_P0052188 Plekhs1 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0051061.1 MGP_129S1SvImJ_G0024831.1 mouse_genomes_project 19 7140638 7145885 + MGP_129S1SvImJ_P0051061 Scgb2a2 protein_coding protein_coding MGP_129S1SvImJ_T0050801.1 MGP_129S1SvImJ_G0024762.1 mouse_genomes_project 19 3438446 3453755 + MGP_129S1SvImJ_P0050801 Pygm protein_coding protein_coding MGP_129S1SvImJ_T0050802.1 MGP_129S1SvImJ_G0024762.1 mouse_genomes_project 19 3438462 3453744 + MGP_129S1SvImJ_P0050802 Pygm protein_coding protein_coding MGP_129S1SvImJ_T0050803.1 MGP_129S1SvImJ_G0024762.1 mouse_genomes_project 19 3446760 3448234 + Pygm protein_coding retained_intron MGP_129S1SvImJ_T0050804.1 MGP_129S1SvImJ_G0024762.1 mouse_genomes_project 19 3452790 3453587 + Pygm protein_coding retained_intron MGP_129S1SvImJ_T0010328.1 MGP_129S1SvImJ_G0008444.1 mouse_genomes_project 19 40863310 40863449 + Mir8091 miRNA miRNA MGP_129S1SvImJ_T0051270.1 MGP_129S1SvImJ_G0024940.1 mouse_genomes_project 19 11039391 11042232 + MGP_129S1SvImJ_P0051270 protein_coding protein_coding MGP_129S1SvImJ_T0051387.1 MGP_129S1SvImJ_G0024999.1 mouse_genomes_project 19 23179232 23224864 - MGP_129S1SvImJ_P0051387 Cbwd1 protein_coding protein_coding MGP_129S1SvImJ_T0051389.1 MGP_129S1SvImJ_G0025001.1 mouse_genomes_project 19 23519855 23726533 + MGP_129S1SvImJ_P0051389 Kank1 protein_coding protein_coding MGP_129S1SvImJ_T0051390.1 MGP_129S1SvImJ_G0025001.1 mouse_genomes_project 19 23686891 23701552 + Kank1 protein_coding processed_transcript MGP_129S1SvImJ_T0051391.1 MGP_129S1SvImJ_G0025001.1 mouse_genomes_project 19 23698478 23718075 + MGP_129S1SvImJ_P0051391 Kank1 protein_coding protein_coding MGP_129S1SvImJ_T0051392.1 MGP_129S1SvImJ_G0025001.1 mouse_genomes_project 19 23714402 23716667 + Kank1 protein_coding retained_intron MGP_129S1SvImJ_T0007086.1 MGP_129S1SvImJ_G0005822.1 mouse_genomes_project 19 26480152 26481061 + Gm28228 lincRNA lincRNA MGP_129S1SvImJ_T0102374.1 MGP_129S1SvImJ_G0040208.1 mouse_genomes_project 19 32172536 32324579 - unprocessed_pseudogene unprocessed_pseudogene MGP_129S1SvImJ_T0100902.1 MGP_129S1SvImJ_G0038969.1 mouse_genomes_project 19 34012408 34012540 + Gm24006 snoRNA snoRNA MGP_129S1SvImJ_T0100909.1 MGP_129S1SvImJ_G0038976.1 mouse_genomes_project 19 56611848 56611976 - Gm22271 snoRNA snoRNA MGP_129S1SvImJ_T0051393.1 MGP_129S1SvImJ_G0025002.1 mouse_genomes_project 19 23803752 23912715 + MGP_129S1SvImJ_P0051393 Dmrt1 protein_coding protein_coding MGP_129S1SvImJ_T0051394.1 MGP_129S1SvImJ_G0025002.1 mouse_genomes_project 19 23803840 23911878 + MGP_129S1SvImJ_P0051394 Dmrt1 protein_coding protein_coding MGP_129S1SvImJ_T0051395.1 MGP_129S1SvImJ_G0025002.1 mouse_genomes_project 19 23803841 23862727 + Dmrt1 protein_coding processed_transcript MGP_129S1SvImJ_T0051023.1 MGP_129S1SvImJ_G0024816.1 mouse_genomes_project 19 6154533 6158624 + MGP_129S1SvImJ_P0051023 Ubxn1 protein_coding protein_coding MGP_129S1SvImJ_T0051024.1 MGP_129S1SvImJ_G0024816.1 mouse_genomes_project 19 6154617 6158632 + MGP_129S1SvImJ_P0051024 Ubxn1 protein_coding protein_coding MGP_129S1SvImJ_T0099646.1 MGP_129S1SvImJ_G0037713.1 mouse_genomes_project 19 46833434 46833541 + Gm23140 snRNA snRNA MGP_129S1SvImJ_T0051263.1 MGP_129S1SvImJ_G0024933.1 mouse_genomes_project 19 10855329 10856262 + MGP_129S1SvImJ_P0051263 Olfr1466 protein_coding protein_coding MGP_129S1SvImJ_T0051578.1 MGP_129S1SvImJ_G0025062.1 mouse_genomes_project 19 33367110 33368778 + MGP_129S1SvImJ_P0051578 protein_coding protein_coding MGP_129S1SvImJ_T0099643.1 MGP_129S1SvImJ_G0037710.1 mouse_genomes_project 19 41280936 41281035 + Gm23113 snRNA snRNA MGP_129S1SvImJ_T0007077.1 MGP_129S1SvImJ_G0005816.1 mouse_genomes_project 19 13686544 13712821 + C130060C02Rik lincRNA lincRNA MGP_129S1SvImJ_T0051307.1 MGP_129S1SvImJ_G0024964.1 mouse_genomes_project 19 15215003 15222247 + MGP_129S1SvImJ_P0051307 Rfk protein_coding protein_coding MGP_129S1SvImJ_T0051308.1 MGP_129S1SvImJ_G0024964.1 mouse_genomes_project 19 15215528 15220756 + Rfk protein_coding processed_transcript MGP_129S1SvImJ_T0051309.1 MGP_129S1SvImJ_G0024964.1 mouse_genomes_project 19 15218397 15220859 + Rfk protein_coding processed_transcript MGP_129S1SvImJ_T0052265.1 MGP_129S1SvImJ_G0025287.1 mouse_genomes_project 19 59772607 59808787 + MGP_129S1SvImJ_P0052265 Slc18a2 protein_coding protein_coding MGP_129S1SvImJ_T0011494.1 MGP_129S1SvImJ_G0009610.1 mouse_genomes_project 19 2848535 2848657 - Gm28006 misc_RNA misc_RNA MGP_129S1SvImJ_T0051294.1 MGP_129S1SvImJ_G0024957.1 mouse_genomes_project 19 13657408 13686444 - MGP_129S1SvImJ_P0051294 Cep78 protein_coding protein_coding MGP_129S1SvImJ_T0051255.1 MGP_129S1SvImJ_G0024925.1 mouse_genomes_project 19 10575428 10576352 + MGP_129S1SvImJ_P0051255 Olfr1454 protein_coding protein_coding MGP_129S1SvImJ_T0050566.1 MGP_129S1SvImJ_G0024706.1 mouse_genomes_project 19 2416939 2425183 + MGP_129S1SvImJ_P0050566 Fosl1 protein_coding protein_coding MGP_129S1SvImJ_T0003884.1 MGP_129S1SvImJ_G0003477.1 mouse_genomes_project 19 27477593 27482254 + antisense antisense MGP_129S1SvImJ_T0007087.1 MGP_129S1SvImJ_G0005823.1 mouse_genomes_project 19 27095198 27138443 + D930032P07Rik lincRNA lincRNA MGP_129S1SvImJ_T0007088.1 MGP_129S1SvImJ_G0005823.1 mouse_genomes_project 19 27095202 27138168 + D930032P07Rik lincRNA lincRNA MGP_129S1SvImJ_T0051484.1 MGP_129S1SvImJ_G0025025.1 mouse_genomes_project 19 28074284 28125532 - MGP_129S1SvImJ_P0051484 Ermp1 protein_coding protein_coding MGP_129S1SvImJ_T0051485.1 MGP_129S1SvImJ_G0025025.1 mouse_genomes_project 19 28074288 28078294 - Ermp1 protein_coding processed_transcript MGP_129S1SvImJ_T0051486.1 MGP_129S1SvImJ_G0025025.1 mouse_genomes_project 19 28076260 28125304 - MGP_129S1SvImJ_P0051486 Ermp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051487.1 MGP_129S1SvImJ_G0025025.1 mouse_genomes_project 19 28078465 28122378 - MGP_129S1SvImJ_P0051487 Ermp1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051488.1 MGP_129S1SvImJ_G0025025.1 mouse_genomes_project 19 28078680 28079283 - Ermp1 protein_coding retained_intron MGP_129S1SvImJ_T0051489.1 MGP_129S1SvImJ_G0025025.1 mouse_genomes_project 19 28094595 28114258 - Ermp1 protein_coding processed_transcript MGP_129S1SvImJ_T0051490.1 MGP_129S1SvImJ_G0025025.1 mouse_genomes_project 19 28095509 28125507 - Ermp1 protein_coding retained_intron MGP_129S1SvImJ_T0051491.1 MGP_129S1SvImJ_G0025025.1 mouse_genomes_project 19 28121060 28125495 - Ermp1 protein_coding retained_intron MGP_129S1SvImJ_T0010337.1 MGP_129S1SvImJ_G0008453.1 mouse_genomes_project 19 47782673 47782755 - Gm22240 miRNA miRNA MGP_129S1SvImJ_T0099645.1 MGP_129S1SvImJ_G0037712.1 mouse_genomes_project 19 44477576 44477683 + Gm25482 snRNA snRNA MGP_129S1SvImJ_T0010319.1 MGP_129S1SvImJ_G0008435.1 mouse_genomes_project 19 28774258 28774335 - Gm24108 miRNA miRNA MGP_129S1SvImJ_T0010309.1 MGP_129S1SvImJ_G0008425.1 mouse_genomes_project 19 6172971 6173047 - Mir5136 miRNA miRNA MGP_129S1SvImJ_T0011502.1 MGP_129S1SvImJ_G0009618.1 mouse_genomes_project 19 33035059 33035218 + Gm27818 misc_RNA misc_RNA MGP_129S1SvImJ_T0010326.1 MGP_129S1SvImJ_G0008442.1 mouse_genomes_project 19 38125272 38125336 - Gm23800 miRNA miRNA MGP_129S1SvImJ_T0051861.1 MGP_129S1SvImJ_G0025159.1 mouse_genomes_project 19 43275831 43355099 - MGP_129S1SvImJ_P0051861 Dnmbp protein_coding unknown_likely_coding MGP_129S1SvImJ_T0051862.1 MGP_129S1SvImJ_G0025159.1 mouse_genomes_project 19 43275831 43376840 - MGP_129S1SvImJ_P0051862 Dnmbp protein_coding unknown_likely_coding MGP_129S1SvImJ_T0051863.1 MGP_129S1SvImJ_G0025159.1 mouse_genomes_project 19 43275831 43320979 - MGP_129S1SvImJ_P0051863 Dnmbp protein_coding unknown_likely_coding MGP_129S1SvImJ_T0051864.1 MGP_129S1SvImJ_G0025159.1 mouse_genomes_project 19 43276985 43345423 - MGP_129S1SvImJ_P0051864 Dnmbp protein_coding protein_coding MGP_129S1SvImJ_T0050556.1 MGP_129S1SvImJ_G0024703.1 mouse_genomes_project 19 2349352 2353705 - MGP_129S1SvImJ_P0050556 Tsga10ip protein_coding protein_coding MGP_129S1SvImJ_T0051568.1 MGP_129S1SvImJ_G0025056.1 mouse_genomes_project 19 33031601 33070458 + MGP_129S1SvImJ_P0051568 Fas protein_coding protein_coding MGP_129S1SvImJ_T0051569.1 MGP_129S1SvImJ_G0025056.1 mouse_genomes_project 19 33031601 33053270 + MGP_129S1SvImJ_P0051569 Fas protein_coding protein_coding MGP_129S1SvImJ_T0050433.1 MGP_129S1SvImJ_G0024659.1 mouse_genomes_project 19 1110533 1118038 - MGP_129S1SvImJ_P0050433 Ssh3 protein_coding protein_coding MGP_129S1SvImJ_T0050434.1 MGP_129S1SvImJ_G0024659.1 mouse_genomes_project 19 1110538 1118038 - MGP_129S1SvImJ_P0050434 Ssh3 protein_coding protein_coding MGP_129S1SvImJ_T0050607.1 MGP_129S1SvImJ_G0024719.1 mouse_genomes_project 19 2622627 2633275 + MGP_129S1SvImJ_P0050607 Rela protein_coding protein_coding MGP_129S1SvImJ_T0017741.1 MGP_129S1SvImJ_G0015383.1 mouse_genomes_project 19 10059143 10069794 - A330040F15Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0051329.1 MGP_129S1SvImJ_G0024972.1 mouse_genomes_project 19 18358675 18377284 - MGP_129S1SvImJ_P0051329 Anxa1 protein_coding protein_coding MGP_129S1SvImJ_T0051330.1 MGP_129S1SvImJ_G0024972.1 mouse_genomes_project 19 18358803 18377012 - Anxa1 protein_coding processed_transcript MGP_129S1SvImJ_T0051331.1 MGP_129S1SvImJ_G0024972.1 mouse_genomes_project 19 18358803 18360534 - Anxa1 protein_coding retained_intron MGP_129S1SvImJ_T0051332.1 MGP_129S1SvImJ_G0024972.1 mouse_genomes_project 19 18362587 18363410 - Anxa1 protein_coding retained_intron MGP_129S1SvImJ_T0051333.1 MGP_129S1SvImJ_G0024972.1 mouse_genomes_project 19 18362587 18364850 - Anxa1 protein_coding retained_intron MGP_129S1SvImJ_T0051334.1 MGP_129S1SvImJ_G0024972.1 mouse_genomes_project 19 18362938 18366950 - Anxa1 protein_coding retained_intron MGP_129S1SvImJ_T0051335.1 MGP_129S1SvImJ_G0024972.1 mouse_genomes_project 19 18364487 18376991 - Anxa1 protein_coding processed_transcript MGP_129S1SvImJ_T0050889.1 MGP_129S1SvImJ_G0024785.1 mouse_genomes_project 19 4314087 4323490 - MGP_129S1SvImJ_P0050889 Otub1 protein_coding protein_coding MGP_129S1SvImJ_T0050890.1 MGP_129S1SvImJ_G0024785.1 mouse_genomes_project 19 4314095 4323408 - MGP_129S1SvImJ_P0050890 Otub1 protein_coding protein_coding MGP_129S1SvImJ_T0050891.1 MGP_129S1SvImJ_G0024785.1 mouse_genomes_project 19 4315431 4316356 - Otub1 protein_coding retained_intron MGP_129S1SvImJ_T0050892.1 MGP_129S1SvImJ_G0024785.1 mouse_genomes_project 19 4315602 4322949 - MGP_129S1SvImJ_P0050892 Otub1 protein_coding protein_coding MGP_129S1SvImJ_T0050893.1 MGP_129S1SvImJ_G0024785.1 mouse_genomes_project 19 4315632 4321593 - Otub1 protein_coding retained_intron MGP_129S1SvImJ_T0052135.1 MGP_129S1SvImJ_G0025252.1 mouse_genomes_project 19 54125922 54226304 + MGP_129S1SvImJ_P0052135 Shoc2 protein_coding protein_coding MGP_129S1SvImJ_T0052136.1 MGP_129S1SvImJ_G0025252.1 mouse_genomes_project 19 54129724 54226304 + MGP_129S1SvImJ_P0052136 Shoc2 protein_coding protein_coding MGP_129S1SvImJ_T0099642.1 MGP_129S1SvImJ_G0037709.1 mouse_genomes_project 19 36443446 36443552 + Gm23026 snRNA snRNA MGP_129S1SvImJ_T0050625.1 MGP_129S1SvImJ_G0024723.1 mouse_genomes_project 19 2688775 2691510 + MGP_129S1SvImJ_P0050625 Kcnk7 protein_coding protein_coding MGP_129S1SvImJ_T0050601.1 MGP_129S1SvImJ_G0024717.1 mouse_genomes_project 19 2583698 2585265 + MGP_129S1SvImJ_P0050601 Rnaseh2c protein_coding protein_coding MGP_129S1SvImJ_T0050602.1 MGP_129S1SvImJ_G0024717.1 mouse_genomes_project 19 2583712 2584693 + Rnaseh2c protein_coding retained_intron MGP_129S1SvImJ_T0050603.1 MGP_129S1SvImJ_G0024717.1 mouse_genomes_project 19 2583800 2584758 + Rnaseh2c protein_coding retained_intron MGP_129S1SvImJ_T0050604.1 MGP_129S1SvImJ_G0024717.1 mouse_genomes_project 19 2584060 2584764 + MGP_129S1SvImJ_P0050604 Rnaseh2c protein_coding protein_coding MGP_129S1SvImJ_T0050605.1 MGP_129S1SvImJ_G0024717.1 mouse_genomes_project 19 2584235 2584760 + Rnaseh2c protein_coding retained_intron MGP_129S1SvImJ_T0052105.1 MGP_129S1SvImJ_G0025242.1 mouse_genomes_project 19 53044491 53148731 - MGP_129S1SvImJ_P0052105 Xpnpep1 protein_coding protein_coding MGP_129S1SvImJ_T0052106.1 MGP_129S1SvImJ_G0025242.1 mouse_genomes_project 19 53052406 53148819 - MGP_129S1SvImJ_P0052106 Xpnpep1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0052107.1 MGP_129S1SvImJ_G0025242.1 mouse_genomes_project 19 53099358 53129096 - Xpnpep1 protein_coding processed_transcript MGP_129S1SvImJ_T0052108.1 MGP_129S1SvImJ_G0025242.1 mouse_genomes_project 19 53099359 53151277 - MGP_129S1SvImJ_P0052108 Xpnpep1 protein_coding protein_coding MGP_129S1SvImJ_T0052109.1 MGP_129S1SvImJ_G0025242.1 mouse_genomes_project 19 53103580 53104850 - Xpnpep1 protein_coding retained_intron MGP_129S1SvImJ_T0052110.1 MGP_129S1SvImJ_G0025242.1 mouse_genomes_project 19 53116144 53123582 - Xpnpep1 protein_coding processed_transcript MGP_129S1SvImJ_T0052111.1 MGP_129S1SvImJ_G0025242.1 mouse_genomes_project 19 53118308 53128931 - Xpnpep1 protein_coding processed_transcript MGP_129S1SvImJ_T0052112.1 MGP_129S1SvImJ_G0025242.1 mouse_genomes_project 19 53120423 53121846 - Xpnpep1 protein_coding retained_intron MGP_129S1SvImJ_T0052113.1 MGP_129S1SvImJ_G0025242.1 mouse_genomes_project 19 53120452 53148738 - MGP_129S1SvImJ_P0052113 Xpnpep1 protein_coding protein_coding MGP_129S1SvImJ_T0052114.1 MGP_129S1SvImJ_G0025242.1 mouse_genomes_project 19 53126225 53140944 - Xpnpep1 protein_coding processed_transcript MGP_129S1SvImJ_T0052115.1 MGP_129S1SvImJ_G0025242.1 mouse_genomes_project 19 53141289 53148742 - Xpnpep1 protein_coding processed_transcript MGP_129S1SvImJ_T0050661.1 MGP_129S1SvImJ_G0024736.1 mouse_genomes_project 19 3010517 3039727 - MGP_129S1SvImJ_P0050661 Capn1 protein_coding protein_coding MGP_129S1SvImJ_T0050662.1 MGP_129S1SvImJ_G0024736.1 mouse_genomes_project 19 3010517 3039149 - MGP_129S1SvImJ_P0050662 Capn1 protein_coding protein_coding MGP_129S1SvImJ_T0052279.1 MGP_129S1SvImJ_G0025295.1 mouse_genomes_project 19 61361739 61393661 - MGP_129S1SvImJ_P0052279 Eif3a protein_coding protein_coding MGP_129S1SvImJ_T0050571.1 MGP_129S1SvImJ_G0024710.1 mouse_genomes_project 19 2443151 2446753 + MGP_129S1SvImJ_P0050571 Efemp2 protein_coding protein_coding MGP_129S1SvImJ_T0050572.1 MGP_129S1SvImJ_G0024710.1 mouse_genomes_project 19 2443493 2445247 + MGP_129S1SvImJ_P0050572 Efemp2 protein_coding protein_coding MGP_129S1SvImJ_T0050573.1 MGP_129S1SvImJ_G0024710.1 mouse_genomes_project 19 2443866 2451055 + MGP_129S1SvImJ_P0050573 Efemp2 protein_coding protein_coding MGP_129S1SvImJ_T0050574.1 MGP_129S1SvImJ_G0024710.1 mouse_genomes_project 19 2443885 2447568 + Efemp2 protein_coding retained_intron MGP_129S1SvImJ_T0050575.1 MGP_129S1SvImJ_G0024710.1 mouse_genomes_project 19 2443918 2449943 + MGP_129S1SvImJ_P0050575 Efemp2 protein_coding protein_coding MGP_129S1SvImJ_T0050576.1 MGP_129S1SvImJ_G0024710.1 mouse_genomes_project 19 2443918 2451055 + MGP_129S1SvImJ_P0050576 Efemp2 protein_coding protein_coding MGP_129S1SvImJ_T0050577.1 MGP_129S1SvImJ_G0024710.1 mouse_genomes_project 19 2443925 2447431 + MGP_129S1SvImJ_P0050577 Efemp2 protein_coding protein_coding MGP_129S1SvImJ_T0050578.1 MGP_129S1SvImJ_G0024710.1 mouse_genomes_project 19 2443928 2451055 + MGP_129S1SvImJ_P0050578 Efemp2 protein_coding protein_coding MGP_129S1SvImJ_T0050579.1 MGP_129S1SvImJ_G0024710.1 mouse_genomes_project 19 2443955 2444647 + Efemp2 protein_coding retained_intron MGP_129S1SvImJ_T0050580.1 MGP_129S1SvImJ_G0024710.1 mouse_genomes_project 19 2444246 2447495 + MGP_129S1SvImJ_P0050580 Efemp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050581.1 MGP_129S1SvImJ_G0024710.1 mouse_genomes_project 19 2444298 2450977 + MGP_129S1SvImJ_P0050581 Efemp2 protein_coding protein_coding MGP_129S1SvImJ_T0050582.1 MGP_129S1SvImJ_G0024710.1 mouse_genomes_project 19 2444483 2449281 + MGP_129S1SvImJ_P0050582 Efemp2 protein_coding protein_coding MGP_129S1SvImJ_T0050583.1 MGP_129S1SvImJ_G0024710.1 mouse_genomes_project 19 2449246 2450118 + MGP_129S1SvImJ_P0050583 Efemp2 protein_coding protein_coding MGP_129S1SvImJ_T0050584.1 MGP_129S1SvImJ_G0024710.1 mouse_genomes_project 19 2449324 2450861 + MGP_129S1SvImJ_P0050584 Efemp2 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051799.1 MGP_129S1SvImJ_G0025140.1 mouse_genomes_project 19 41442153 41447940 - MGP_129S1SvImJ_P0051799 Avpi1 protein_coding protein_coding MGP_129S1SvImJ_T0051800.1 MGP_129S1SvImJ_G0025140.1 mouse_genomes_project 19 41443659 41447870 - MGP_129S1SvImJ_P0051800 Avpi1 protein_coding protein_coding MGP_129S1SvImJ_T0051173.1 MGP_129S1SvImJ_G0024876.1 mouse_genomes_project 19 8701283 8714886 - MGP_129S1SvImJ_P0051173 Ms4a7 protein_coding protein_coding MGP_129S1SvImJ_T0051174.1 MGP_129S1SvImJ_G0024876.1 mouse_genomes_project 19 8701283 8716335 - MGP_129S1SvImJ_P0051174 Ms4a7 protein_coding protein_coding MGP_129S1SvImJ_T0051175.1 MGP_129S1SvImJ_G0024876.1 mouse_genomes_project 19 8701650 8716307 - MGP_129S1SvImJ_P0051175 Ms4a7 protein_coding protein_coding MGP_129S1SvImJ_T0051176.1 MGP_129S1SvImJ_G0024876.1 mouse_genomes_project 19 8701653 8704841 - MGP_129S1SvImJ_P0051176 Ms4a7 protein_coding protein_coding MGP_129S1SvImJ_T0051177.1 MGP_129S1SvImJ_G0024876.1 mouse_genomes_project 19 8701749 8716337 - Ms4a7 protein_coding retained_intron MGP_129S1SvImJ_T0050637.1 MGP_129S1SvImJ_G0024727.1 mouse_genomes_project 19 2731063 2748702 + MGP_129S1SvImJ_P0050637 Ltbp3 protein_coding protein_coding MGP_129S1SvImJ_T0010324.1 MGP_129S1SvImJ_G0008440.1 mouse_genomes_project 19 33751385 33751459 + Mir1950 miRNA miRNA MGP_129S1SvImJ_T0051855.1 MGP_129S1SvImJ_G0025158.1 mouse_genomes_project 19 43207808 43268587 + MGP_129S1SvImJ_P0051855 Abcc2 protein_coding protein_coding MGP_129S1SvImJ_T0051856.1 MGP_129S1SvImJ_G0025158.1 mouse_genomes_project 19 43207942 43210215 + Abcc2 protein_coding retained_intron MGP_129S1SvImJ_T0051857.1 MGP_129S1SvImJ_G0025158.1 mouse_genomes_project 19 43208020 43253972 + MGP_129S1SvImJ_P0051857 Abcc2 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0051858.1 MGP_129S1SvImJ_G0025158.1 mouse_genomes_project 19 43223566 43226350 + Abcc2 protein_coding retained_intron MGP_129S1SvImJ_T0051859.1 MGP_129S1SvImJ_G0025158.1 mouse_genomes_project 19 43235778 43238658 + Abcc2 protein_coding retained_intron MGP_129S1SvImJ_T0051860.1 MGP_129S1SvImJ_G0025158.1 mouse_genomes_project 19 43266677 43268575 + MGP_129S1SvImJ_P0051860 Abcc2 protein_coding protein_coding MGP_129S1SvImJ_T0098552.1 MGP_129S1SvImJ_G0036637.1 mouse_genomes_project 19 36117294 36117400 + Gm23918 rRNA rRNA MGP_129S1SvImJ_T0051372.1 MGP_129S1SvImJ_G0024991.1 mouse_genomes_project 19 22160312 22223943 - MGP_129S1SvImJ_P0051372 protein_coding protein_coding MGP_129S1SvImJ_T0052051.1 MGP_129S1SvImJ_G0025222.1 mouse_genomes_project 19 46858859 46867561 - MGP_129S1SvImJ_P0052051 Usmg5 protein_coding protein_coding MGP_129S1SvImJ_T0051273.1 MGP_129S1SvImJ_G0024943.1 mouse_genomes_project 19 11208557 11209508 + MGP_129S1SvImJ_P0051273 Olfr1490 protein_coding protein_coding MGP_129S1SvImJ_T0017757.1 MGP_129S1SvImJ_G0015390.1 mouse_genomes_project 19 60481394 60486058 + Gm4219 processed_transcript processed_transcript MGP_129S1SvImJ_T0017706.1 MGP_129S1SvImJ_G0015375.1 mouse_genomes_project 19 1311009 1320291 + A930001C03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017707.1 MGP_129S1SvImJ_G0015375.1 mouse_genomes_project 19 1311565 1320148 + A930001C03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017708.1 MGP_129S1SvImJ_G0015375.1 mouse_genomes_project 19 1315702 1319828 + A930001C03Rik processed_transcript processed_transcript MGP_129S1SvImJ_T0017709.1 MGP_129S1SvImJ_G0015375.1 mouse_genomes_project 19 1318777 1320297 + A930001C03Rik processed_transcript retained_intron MGP_129S1SvImJ_T0050478.1 MGP_129S1SvImJ_G0024669.1 mouse_genomes_project 19 1513008 1587170 - MGP_129S1SvImJ_P0050478 Gm960 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0050479.1 MGP_129S1SvImJ_G0024669.1 mouse_genomes_project 19 1513028 1587632 - MGP_129S1SvImJ_P0050479 Gm960 protein_coding protein_coding MGP_129S1SvImJ_T0050480.1 MGP_129S1SvImJ_G0024669.1 mouse_genomes_project 19 1536580 1587279 - MGP_129S1SvImJ_P0050480 Gm960 protein_coding protein_coding MGP_129S1SvImJ_T0050612.1 MGP_129S1SvImJ_G0024721.1 mouse_genomes_project 19 2649756 2673317 - MGP_129S1SvImJ_P0050612 Pcnx3 protein_coding protein_coding MGP_129S1SvImJ_T0050613.1 MGP_129S1SvImJ_G0024721.1 mouse_genomes_project 19 2649759 2659119 - Pcnx3 protein_coding retained_intron MGP_129S1SvImJ_T0050614.1 MGP_129S1SvImJ_G0024721.1 mouse_genomes_project 19 2649761 2672558 - MGP_129S1SvImJ_P0050614 Pcnx3 protein_coding protein_coding MGP_129S1SvImJ_T0050615.1 MGP_129S1SvImJ_G0024721.1 mouse_genomes_project 19 2650357 2651320 - Pcnx3 protein_coding retained_intron MGP_129S1SvImJ_T0050616.1 MGP_129S1SvImJ_G0024721.1 mouse_genomes_project 19 2650537 2652104 - MGP_129S1SvImJ_P0050616 Pcnx3 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050617.1 MGP_129S1SvImJ_G0024721.1 mouse_genomes_project 19 2651112 2651648 - Pcnx3 protein_coding retained_intron MGP_129S1SvImJ_T0050618.1 MGP_129S1SvImJ_G0024721.1 mouse_genomes_project 19 2658463 2669288 - MGP_129S1SvImJ_P0050618 Pcnx3 protein_coding protein_coding MGP_129S1SvImJ_T0050619.1 MGP_129S1SvImJ_G0024721.1 mouse_genomes_project 19 2660094 2664196 - MGP_129S1SvImJ_P0050619 Pcnx3 protein_coding protein_coding MGP_129S1SvImJ_T0050620.1 MGP_129S1SvImJ_G0024721.1 mouse_genomes_project 19 2663601 2667962 - MGP_129S1SvImJ_P0050620 Pcnx3 protein_coding protein_coding MGP_129S1SvImJ_T0050621.1 MGP_129S1SvImJ_G0024721.1 mouse_genomes_project 19 2664021 2668492 - MGP_129S1SvImJ_P0050621 Pcnx3 protein_coding protein_coding MGP_129S1SvImJ_T0050622.1 MGP_129S1SvImJ_G0024721.1 mouse_genomes_project 19 2664552 2666155 - Pcnx3 protein_coding retained_intron MGP_129S1SvImJ_T0050623.1 MGP_129S1SvImJ_G0024721.1 mouse_genomes_project 19 2668359 2673104 - Pcnx3 protein_coding retained_intron MGP_129S1SvImJ_T0050896.1 MGP_129S1SvImJ_G0024788.1 mouse_genomes_project 19 4389937 4392757 + MGP_129S1SvImJ_P0050896 Rcor2 protein_coding protein_coding MGP_129S1SvImJ_T0050897.1 MGP_129S1SvImJ_G0024788.1 mouse_genomes_project 19 4391574 4397844 + MGP_129S1SvImJ_P0050897 Rcor2 protein_coding protein_coding MGP_129S1SvImJ_T0050898.1 MGP_129S1SvImJ_G0024788.1 mouse_genomes_project 19 4393564 4394382 + Rcor2 protein_coding retained_intron MGP_129S1SvImJ_T0013400.1 MGP_129S1SvImJ_G0011489.1 mouse_genomes_project 19 27289207 27290567 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0050363.1 MGP_129S1SvImJ_G0024640.1 mouse_genomes_project 19 826190 826706 - Ndufv1 protein_coding retained_intron MGP_129S1SvImJ_T0050364.1 MGP_129S1SvImJ_G0024640.1 mouse_genomes_project 19 826191 831310 - MGP_129S1SvImJ_P0050364 Ndufv1 protein_coding protein_coding MGP_129S1SvImJ_T0050365.1 MGP_129S1SvImJ_G0024640.1 mouse_genomes_project 19 826249 831361 - MGP_129S1SvImJ_P0050365 Ndufv1 protein_coding protein_coding MGP_129S1SvImJ_T0050366.1 MGP_129S1SvImJ_G0024640.1 mouse_genomes_project 19 826982 828535 - Ndufv1 protein_coding retained_intron MGP_129S1SvImJ_T0050367.1 MGP_129S1SvImJ_G0024640.1 mouse_genomes_project 19 827052 827828 - Ndufv1 protein_coding retained_intron MGP_129S1SvImJ_T0050368.1 MGP_129S1SvImJ_G0024640.1 mouse_genomes_project 19 827440 831392 - Ndufv1 protein_coding retained_intron MGP_129S1SvImJ_T0050369.1 MGP_129S1SvImJ_G0024640.1 mouse_genomes_project 19 828054 831396 - MGP_129S1SvImJ_P0050369 Ndufv1 protein_coding protein_coding MGP_129S1SvImJ_T0050370.1 MGP_129S1SvImJ_G0024640.1 mouse_genomes_project 19 828105 831353 - MGP_129S1SvImJ_P0050370 Ndufv1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050371.1 MGP_129S1SvImJ_G0024640.1 mouse_genomes_project 19 828149 831447 - MGP_129S1SvImJ_P0050371 Ndufv1 protein_coding protein_coding MGP_129S1SvImJ_T0050372.1 MGP_129S1SvImJ_G0024640.1 mouse_genomes_project 19 828688 831349 - Ndufv1 protein_coding retained_intron MGP_129S1SvImJ_T0050880.1 MGP_129S1SvImJ_G0024778.1 mouse_genomes_project 19 4083299 4087697 - MGP_129S1SvImJ_P0050880 Dnajc4 protein_coding protein_coding MGP_129S1SvImJ_T0051316.1 MGP_129S1SvImJ_G0024967.1 mouse_genomes_project 19 16506168 16510567 + Nmrk1 protein_coding retained_intron MGP_129S1SvImJ_T0051317.1 MGP_129S1SvImJ_G0024967.1 mouse_genomes_project 19 16506168 16526666 + MGP_129S1SvImJ_P0051317 Nmrk1 protein_coding protein_coding MGP_129S1SvImJ_T0051318.1 MGP_129S1SvImJ_G0024967.1 mouse_genomes_project 19 16506168 16526399 + MGP_129S1SvImJ_P0051318 Nmrk1 protein_coding protein_coding MGP_129S1SvImJ_T0051319.1 MGP_129S1SvImJ_G0024967.1 mouse_genomes_project 19 16506177 16515399 + MGP_129S1SvImJ_P0051319 Nmrk1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0051320.1 MGP_129S1SvImJ_G0024967.1 mouse_genomes_project 19 16506180 16511481 + Nmrk1 protein_coding retained_intron MGP_129S1SvImJ_T0051916.1 MGP_129S1SvImJ_G0025178.1 mouse_genomes_project 19 44524909 44538532 + MGP_129S1SvImJ_P0051916 Sema4g protein_coding unknown_likely_coding MGP_129S1SvImJ_T0098553.1 MGP_129S1SvImJ_G0036638.1 mouse_genomes_project 19 42519025 42519133 - Gm22135 rRNA rRNA MGP_129S1SvImJ_T0010307.1 MGP_129S1SvImJ_G0008423.1 mouse_genomes_project 19 5132314 5132415 - Gm26377 miRNA miRNA MGP_129S1SvImJ_T0050502.1 MGP_129S1SvImJ_G0024675.1 mouse_genomes_project 19 1721984 1735925 - MGP_129S1SvImJ_P0050502 Ccs protein_coding protein_coding MGP_129S1SvImJ_T0017742.1 MGP_129S1SvImJ_G0015384.1 mouse_genomes_project 19 24946736 24949334 - Gm20616 processed_transcript processed_transcript MGP_129S1SvImJ_T0017743.1 MGP_129S1SvImJ_G0015384.1 mouse_genomes_project 19 24946947 24949325 - Gm20616 processed_transcript processed_transcript MGP_129S1SvImJ_T0099644.1 MGP_129S1SvImJ_G0037711.1 mouse_genomes_project 19 43286445 43286552 - Gm24400 snRNA snRNA MGP_129S1SvImJ_T0051638.1 MGP_129S1SvImJ_G0025080.1 mouse_genomes_project 19 36344774 36395959 + MGP_129S1SvImJ_P0051638 Kif11 protein_coding protein_coding MGP_129S1SvImJ_T0003901.1 MGP_129S1SvImJ_G0003491.1 mouse_genomes_project 19 59946168 59982384 - Emx2os antisense antisense MGP_129S1SvImJ_T0052015.1 MGP_129S1SvImJ_G0025206.1 mouse_genomes_project 19 46010784 46019650 - MGP_129S1SvImJ_P0052015 Cuedc2 protein_coding protein_coding MGP_129S1SvImJ_T0052016.1 MGP_129S1SvImJ_G0025206.1 mouse_genomes_project 19 46010784 46019650 - MGP_129S1SvImJ_P0052016 Cuedc2 protein_coding protein_coding MGP_129S1SvImJ_T0100890.1 MGP_129S1SvImJ_G0038957.1 mouse_genomes_project 19 5994298 5994424 + Snord22 snoRNA snoRNA MGP_129S1SvImJ_T0099637.1 MGP_129S1SvImJ_G0037704.1 mouse_genomes_project 19 24564165 24564290 - Gm25176 snRNA snRNA MGP_129S1SvImJ_T0003867.1 MGP_129S1SvImJ_G0003466.1 mouse_genomes_project 19 2713052 2717474 + Gm16538 antisense antisense MGP_129S1SvImJ_T0051554.1 MGP_129S1SvImJ_G0025050.1 mouse_genomes_project 19 32740948 32778328 + MGP_129S1SvImJ_P0051554 Lipk protein_coding protein_coding MGP_129S1SvImJ_T0007096.1 MGP_129S1SvImJ_G0005828.1 mouse_genomes_project 19 34676119 34763050 - A830019P07Rik lincRNA lincRNA MGP_129S1SvImJ_T0051456.1 MGP_129S1SvImJ_G0025014.1 mouse_genomes_project 19 27393051 27395909 + MGP_129S1SvImJ_P0051456 Plpp6 protein_coding protein_coding MGP_129S1SvImJ_T0101878.1 MGP_129S1SvImJ_G0039808.1 mouse_genomes_project 19 38366725 38393336 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0101879.1 MGP_129S1SvImJ_G0039808.1 mouse_genomes_project 19 38366755 38393293 + transcribed_unprocessed_pseudogene transcribed_unprocessed_pseudogene MGP_129S1SvImJ_T0101880.1 MGP_129S1SvImJ_G0039808.1 mouse_genomes_project 19 38390080 38393584 + transcribed_unprocessed_pseudogene processed_transcript MGP_129S1SvImJ_T0007080.1 MGP_129S1SvImJ_G0005818.1 mouse_genomes_project 19 21143683 21190707 - C330002G04Rik lincRNA lincRNA MGP_129S1SvImJ_T0051026.1 MGP_129S1SvImJ_G0024818.1 mouse_genomes_project 19 6168004 6177796 + MGP_129S1SvImJ_P0051026 Lbhd1 protein_coding protein_coding MGP_129S1SvImJ_T0051027.1 MGP_129S1SvImJ_G0024818.1 mouse_genomes_project 19 6168196 6171314 + Lbhd1 protein_coding retained_intron MGP_129S1SvImJ_T0051028.1 MGP_129S1SvImJ_G0024818.1 mouse_genomes_project 19 6168202 6171531 + MGP_129S1SvImJ_P0051028 Lbhd1 protein_coding protein_coding MGP_129S1SvImJ_T0051034.1 MGP_129S1SvImJ_G0024818.1 mouse_genomes_project 19 6173550 6175827 + Lbhd1 protein_coding processed_transcript MGP_129S1SvImJ_T0050991.1 MGP_129S1SvImJ_G0024808.1 mouse_genomes_project 19 6048944 6050890 - MGP_129S1SvImJ_P0050991 Taf6l protein_coding protein_coding MGP_129S1SvImJ_T0050992.1 MGP_129S1SvImJ_G0024808.1 mouse_genomes_project 19 6050776 6066842 - MGP_129S1SvImJ_P0050992 Taf6l protein_coding protein_coding MGP_129S1SvImJ_T0050993.1 MGP_129S1SvImJ_G0024808.1 mouse_genomes_project 19 6050909 6053385 - Taf6l protein_coding retained_intron MGP_129S1SvImJ_T0050994.1 MGP_129S1SvImJ_G0024808.1 mouse_genomes_project 19 6050914 6066783 - MGP_129S1SvImJ_P0050994 Taf6l protein_coding protein_coding MGP_129S1SvImJ_T0050995.1 MGP_129S1SvImJ_G0024808.1 mouse_genomes_project 19 6050916 6066842 - MGP_129S1SvImJ_P0050995 Taf6l protein_coding protein_coding MGP_129S1SvImJ_T0050996.1 MGP_129S1SvImJ_G0024808.1 mouse_genomes_project 19 6050918 6066943 - MGP_129S1SvImJ_P0050996 Taf6l protein_coding protein_coding MGP_129S1SvImJ_T0050997.1 MGP_129S1SvImJ_G0024808.1 mouse_genomes_project 19 6050951 6064525 - MGP_129S1SvImJ_P0050997 Taf6l protein_coding protein_coding MGP_129S1SvImJ_T0050998.1 MGP_129S1SvImJ_G0024808.1 mouse_genomes_project 19 6050951 6064525 - MGP_129S1SvImJ_P0050998 Taf6l protein_coding protein_coding MGP_129S1SvImJ_T0050999.1 MGP_129S1SvImJ_G0024808.1 mouse_genomes_project 19 6051859 6059576 - Taf6l protein_coding retained_intron MGP_129S1SvImJ_T0051000.1 MGP_129S1SvImJ_G0024808.1 mouse_genomes_project 19 6058440 6066807 - Taf6l protein_coding retained_intron MGP_129S1SvImJ_T0051001.1 MGP_129S1SvImJ_G0024808.1 mouse_genomes_project 19 6059076 6062849 - Taf6l protein_coding processed_transcript MGP_129S1SvImJ_T0051002.1 MGP_129S1SvImJ_G0024808.1 mouse_genomes_project 19 6059102 6063203 - Taf6l protein_coding retained_intron MGP_129S1SvImJ_T0051003.1 MGP_129S1SvImJ_G0024808.1 mouse_genomes_project 19 6062336 6066791 - Taf6l protein_coding retained_intron MGP_129S1SvImJ_T0051260.1 MGP_129S1SvImJ_G0024930.1 mouse_genomes_project 19 10709407 10710331 + MGP_129S1SvImJ_P0051260 Olfr1462 protein_coding protein_coding MGP_129S1SvImJ_T0051844.1 MGP_129S1SvImJ_G0025155.1 mouse_genomes_project 19 43099849 43151152 + MGP_129S1SvImJ_P0051844 Entpd7 protein_coding protein_coding MGP_129S1SvImJ_T0051845.1 MGP_129S1SvImJ_G0025155.1 mouse_genomes_project 19 43099986 43102946 + Entpd7 protein_coding retained_intron MGP_129S1SvImJ_T0051846.1 MGP_129S1SvImJ_G0025155.1 mouse_genomes_project 19 43100017 43140126 + Entpd7 protein_coding retained_intron MGP_129S1SvImJ_T0051847.1 MGP_129S1SvImJ_G0025155.1 mouse_genomes_project 19 43125118 43131553 + Entpd7 protein_coding retained_intron MGP_129S1SvImJ_T0051848.1 MGP_129S1SvImJ_G0025155.1 mouse_genomes_project 19 43143876 43145643 + Entpd7 protein_coding retained_intron MGP_129S1SvImJ_T0051346.1 MGP_129S1SvImJ_G0024978.1 mouse_genomes_project 19 19594333 19596317 + MGP_129S1SvImJ_P0051346 Gm3443 protein_coding protein_coding MGP_129S1SvImJ_T0007102.1 MGP_129S1SvImJ_G0005833.1 mouse_genomes_project 19 43016846 43018398 - Gm20467 lincRNA lincRNA MGP_129S1SvImJ_T0003895.1 MGP_129S1SvImJ_G0003485.1 mouse_genomes_project 19 47333125 47336722 + Gm19557 antisense antisense MGP_129S1SvImJ_T0099638.1 MGP_129S1SvImJ_G0037705.1 mouse_genomes_project 19 28475162 28475328 + Gm26046 snRNA snRNA MGP_129S1SvImJ_T0052060.1 MGP_129S1SvImJ_G0025229.1 mouse_genomes_project 19 47057853 47280165 - MGP_129S1SvImJ_P0052060 Sh3pxd2a protein_coding protein_coding MGP_129S1SvImJ_T0052061.1 MGP_129S1SvImJ_G0025229.1 mouse_genomes_project 19 47057853 47280165 - MGP_129S1SvImJ_P0052061 Sh3pxd2a protein_coding protein_coding MGP_129S1SvImJ_T0050548.1 MGP_129S1SvImJ_G0024696.1 mouse_genomes_project 19 2225311 2246614 - MGP_129S1SvImJ_P0050548 Sf3b2 protein_coding protein_coding MGP_129S1SvImJ_T0013399.1 MGP_129S1SvImJ_G0011488.1 mouse_genomes_project 19 27239715 27240512 - processed_pseudogene processed_pseudogene MGP_129S1SvImJ_T0052147.1 MGP_129S1SvImJ_G0025258.1 mouse_genomes_project 19 55566275 55584016 - MGP_129S1SvImJ_P0052147 Zdhhc6 protein_coding protein_coding MGP_129S1SvImJ_T0052148.1 MGP_129S1SvImJ_G0025258.1 mouse_genomes_project 19 55566759 55583989 - MGP_129S1SvImJ_P0052148 Zdhhc6 protein_coding unknown_likely_coding MGP_129S1SvImJ_T0007078.1 MGP_129S1SvImJ_G0005817.1 mouse_genomes_project 19 18393164 18410694 + 1500015L24Rik lincRNA lincRNA MGP_129S1SvImJ_T0007079.1 MGP_129S1SvImJ_G0005817.1 mouse_genomes_project 19 18410272 18410686 + 1500015L24Rik lincRNA lincRNA MGP_129S1SvImJ_T0051542.1 MGP_129S1SvImJ_G0025042.1 mouse_genomes_project 19 31313859 31359381 - MGP_129S1SvImJ_P0051542 Atad1 protein_coding protein_coding MGP_129S1SvImJ_T0050704.1 MGP_129S1SvImJ_G0024746.1 mouse_genomes_project 19 3109954 3114384 - MGP_129S1SvImJ_P0050704 Zfpl1 protein_coding protein_coding MGP_129S1SvImJ_T0050705.1 MGP_129S1SvImJ_G0024746.1 mouse_genomes_project 19 3109957 3112272 - Zfpl1 protein_coding retained_intron MGP_129S1SvImJ_T0050706.1 MGP_129S1SvImJ_G0024746.1 mouse_genomes_project 19 3110360 3114356 - MGP_129S1SvImJ_P0050706 Zfpl1 protein_coding protein_coding MGP_129S1SvImJ_T0050707.1 MGP_129S1SvImJ_G0024746.1 mouse_genomes_project 19 3111305 3114134 - MGP_129S1SvImJ_P0050707 Zfpl1 protein_coding protein_coding MGP_129S1SvImJ_T0050708.1 MGP_129S1SvImJ_G0024746.1 mouse_genomes_project 19 3111635 3114335 - Zfpl1 protein_coding retained_intron MGP_129S1SvImJ_T0050709.1 MGP_129S1SvImJ_G0024746.1 mouse_genomes_project 19 3111655 3114345 - MGP_129S1SvImJ_P0050709 Zfpl1 protein_coding nonsense_mediated_decay MGP_129S1SvImJ_T0050710.1 MGP_129S1SvImJ_G0024746.1 mouse_genomes_project 19 3111696 3113748 - Zfpl1 protein_coding retained_intron MGP_129S1SvImJ_T0050711.1 MGP_129S1SvImJ_G0024746.1 mouse_genomes_project 19 3111701 3114385 - MGP_129S1SvImJ_P0050711 Zfpl1 protein_coding protein_coding MGP_129S1SvImJ_T0050712.1 MGP_129S1SvImJ_G0024746.1 mouse_genomes_project 19 3112046 3114368 - MGP_129S1SvImJ_P0050712 Zfpl1 protein_coding protein_coding MGP_129S1SvImJ_T0010320.1 MGP_129S1SvImJ_G0008436.1 mouse_genomes_project 19 31848235 31848325 + Mir3970 miRNA miRNA MGP_129S1SvImJ_T0007113.1 MGP_129S1SvImJ_G0005841.1 mouse_genomes_project 19 50688787 50794513 + Gm26629 lincRNA lincRNA MGP_129S1SvImJ_T0052264.1 MGP_129S1SvImJ_G0025286.1 mouse_genomes_project 19 59732089 59747778 + MGP_129S1SvImJ_P0052264 Kcnk18 protein_coding protein_coding